BLASTP 2.2.22 [Sep-27-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.


Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= gi|255764464|ref|YP_003064771.2| Cytidine/deoxycytidylate
deaminase, zinc-binding region [Candidatus Liberibacter asiaticus str.
psy62]
         (149 letters)

Database: nr 
           14,124,377 sequences; 4,842,793,630 total letters

Searching..................................................done


Results from round 1


>gi|255764464|ref|YP_003064771.2| Cytidine/deoxycytidylate deaminase, zinc-binding region [Candidatus
           Liberibacter asiaticus str. psy62]
 gi|254547815|gb|ACT56831.2| Cytidine/deoxycytidylate deaminase, zinc-binding region [Candidatus
           Liberibacter asiaticus str. psy62]
          Length = 149

 Score =  308 bits (789), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 149/149 (100%), Positives = 149/149 (100%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR
Sbjct: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
           MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA
Sbjct: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
           TCHHSPEIYPGISEQRSRQIIQDFFKERR
Sbjct: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149


>gi|315122181|ref|YP_004062670.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [Candidatus
           Liberibacter solanacearum CLso-ZC1]
 gi|313495583|gb|ADR52182.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [Candidatus
           Liberibacter solanacearum CLso-ZC1]
          Length = 150

 Score =  259 bits (662), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 124/145 (85%), Positives = 131/145 (90%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           N FMS ALEEA NA+LRNEIPVGAVAVLNNKII RAGNRNRELKDVTAHAEILAIRM C+
Sbjct: 5   NNFMSLALEEALNASLRNEIPVGAVAVLNNKIIGRAGNRNRELKDVTAHAEILAIRMSCQ 64

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
            LSQE LP VDLYVTLEPCTMCAAAIS ARIRRLYYGASNPKGG IENG +FYTLATCHH
Sbjct: 65  TLSQETLPGVDLYVTLEPCTMCAAAISFARIRRLYYGASNPKGGAIENGIEFYTLATCHH 124

Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149
            PEIY GI+E+RS+QI+Q FFKERR
Sbjct: 125 KPEIYSGIAEKRSKQIMQKFFKERR 149


>gi|306840968|ref|ZP_07473709.1| cytidine and deoxycytidylate deaminase family protein [Brucella sp.
           BO2]
 gi|306289025|gb|EFM60290.1| cytidine and deoxycytidylate deaminase family protein [Brucella sp.
           BO2]
          Length = 157

 Score =  202 bits (513), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 95/142 (66%), Positives = 111/142 (78%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  ALEEA  A  R E+P+GAV V N +II+RAGNR RE  DVTAHAEILAIR    +L 
Sbjct: 16  MDIALEEAHAAGERGEVPIGAVIVRNGEIIARAGNRTREFNDVTAHAEILAIRQAGEVLG 75

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
            E L + DLYVTLEPC MCAAAIS ARIRRLYYGAS+PKGGGIE+G +FYT  TCHH+PE
Sbjct: 76  SERLIDCDLYVTLEPCAMCAAAISFARIRRLYYGASDPKGGGIEHGGRFYTQPTCHHAPE 135

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
           IYPG  E  +R+I++DFF+E+R
Sbjct: 136 IYPGFCEADARKILKDFFREKR 157


>gi|222085014|ref|YP_002543543.1| cytosine deaminase protein [Agrobacterium radiobacter K84]
 gi|221722462|gb|ACM25618.1| cytosine deaminase protein [Agrobacterium radiobacter K84]
          Length = 152

 Score =  201 bits (510), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 92/149 (61%), Positives = 115/149 (77%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M   N FM  AL EA++A  R E+P+GAV VL+N +I++AGNR REL DVTAHAEI AIR
Sbjct: 1   MANTNHFMKLALAEARSAGARGEVPIGAVLVLDNAVIAKAGNRTRELNDVTAHAEIAAIR 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
           + C  L QE L   DLYVTLEPCTMCAAAIS ARIRRLYYGA +PKGGG++NG +FY   
Sbjct: 61  IACEALGQERLTGADLYVTLEPCTMCAAAISFARIRRLYYGAEDPKGGGVDNGVRFYRQP 120

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
           TCHH+PE+Y GI+E+ +  I+++FF+ +R
Sbjct: 121 TCHHAPEVYSGIAERDAADILREFFQLKR 149


>gi|15888031|ref|NP_353712.1| cytidine and deoxycytidylate deaminase [Agrobacterium tumefaciens
           str. C58]
 gi|15155649|gb|AAK86497.1| cytidine and deoxycytidylate deaminase [Agrobacterium tumefaciens
           str. C58]
          Length = 152

 Score =  200 bits (508), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 89/149 (59%), Positives = 116/149 (77%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M +   FM  AL EA++A  R+E+P+GAV VL+ ++I+R+GNR REL DVTAHAEI  IR
Sbjct: 1   MAERTHFMELALVEARSAGERDEVPIGAVLVLDGRVIARSGNRTRELNDVTAHAEIAVIR 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
           M C  L QE LP  DLYVTLEPCTMCAAAIS ARIRRLYYGA +PKGG +E+G +F++  
Sbjct: 61  MACEALGQERLPGADLYVTLEPCTMCAAAISFARIRRLYYGAQDPKGGAVESGVRFFSQP 120

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
           TCHH+P++Y G++E  S +I++ FF+E+R
Sbjct: 121 TCHHAPDVYSGLAESESAEILRQFFREKR 149


>gi|254719939|ref|ZP_05181750.1| cytidine and deoxycytidylate deaminase family protein [Brucella sp.
           83/13]
 gi|265984947|ref|ZP_06097682.1| CMP/dCMP deaminase zinc-binding protein [Brucella sp. 83/13]
 gi|306838528|ref|ZP_07471366.1| cytidine and deoxycytidylate deaminase family protein [Brucella sp.
           NF 2653]
 gi|264663539|gb|EEZ33800.1| CMP/dCMP deaminase zinc-binding protein [Brucella sp. 83/13]
 gi|306406395|gb|EFM62636.1| cytidine and deoxycytidylate deaminase family protein [Brucella sp.
           NF 2653]
          Length = 157

 Score =  199 bits (507), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 93/142 (65%), Positives = 110/142 (77%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  ALEEA  A  R E+P+GAV V + +II+RAGNR RE  DVTAHAEIL IR    +L 
Sbjct: 16  MDIALEEAHAAGERGEVPIGAVIVRDGEIIARAGNRTREFNDVTAHAEILTIRQAGEVLG 75

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
            E L + DLYVTLEPC MCAAAIS ARIRRLYYGAS+PKGGGIE+G +FYT  TCHH+PE
Sbjct: 76  SERLVDCDLYVTLEPCAMCAAAISFARIRRLYYGASDPKGGGIEHGGRFYTQPTCHHAPE 135

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
           IYPG  E  +R+I++DFF+E+R
Sbjct: 136 IYPGFCEADARKILKDFFREKR 157


>gi|306845521|ref|ZP_07478090.1| cytidine and deoxycytidylate deaminase family protein [Brucella sp.
           BO1]
 gi|306273842|gb|EFM55669.1| cytidine and deoxycytidylate deaminase family protein [Brucella sp.
           BO1]
          Length = 157

 Score =  199 bits (505), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 93/142 (65%), Positives = 110/142 (77%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  ALEEA  A  R E+P+GAV V + +II+RAGNR RE  DVTAHAEIL IR    +L 
Sbjct: 16  MDIALEEAHAAGERGEVPIGAVIVRDGEIIARAGNRTREFNDVTAHAEILTIRQAGEVLG 75

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
            E L + DLYVTLEPC MCAAAIS ARIRRLYYGAS+PKGGGIE+G +FYT  TCHH+PE
Sbjct: 76  SERLIDCDLYVTLEPCAMCAAAISFARIRRLYYGASDPKGGGIEHGGRFYTQPTCHHAPE 135

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
           IYPG  E  +R+I++DFF+E+R
Sbjct: 136 IYPGFCEADARKILRDFFREKR 157


>gi|225628666|ref|ZP_03786700.1| cytidine and deoxycytidylate deaminase family protein [Brucella
           ceti str. Cudo]
 gi|237816711|ref|ZP_04595703.1| cytidine and deoxycytidylate deaminase family protein [Brucella
           abortus str. 2308 A]
 gi|225616512|gb|EEH13560.1| cytidine and deoxycytidylate deaminase family protein [Brucella
           ceti str. Cudo]
 gi|237787524|gb|EEP61740.1| cytidine and deoxycytidylate deaminase family protein [Brucella
           abortus str. 2308 A]
          Length = 171

 Score =  198 bits (504), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 93/142 (65%), Positives = 110/142 (77%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  ALEEA  A  R E+P+GAV V + +II+RAGNR RE  DVTAHAEIL IR    +L 
Sbjct: 30  MDIALEEAHAAGERGEVPIGAVIVRDGEIIARAGNRTREFNDVTAHAEILTIRQAGEMLG 89

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
            E L + DLYVTLEPC MCAAAIS ARIRRLYYGAS+PKGGGIE+G +FYT  TCHH+PE
Sbjct: 90  SERLIDCDLYVTLEPCAMCAAAISFARIRRLYYGASDPKGGGIEHGGRFYTQPTCHHAPE 149

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
           IYPG  E  +R+I++DFF+E+R
Sbjct: 150 IYPGFCEADARKILKDFFREKR 171


>gi|62317152|ref|YP_223005.1| cytidine and deoxycytidylate deaminase family protein [Brucella
           abortus bv. 1 str. 9-941]
 gi|83269135|ref|YP_418426.1| cytidine/deoxycytidylate deaminase [Brucella melitensis biovar
           Abortus 2308]
 gi|161620282|ref|YP_001594168.1| CMP/dCMP deaminase zinc-binding [Brucella canis ATCC 23365]
 gi|189022411|ref|YP_001932152.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [Brucella
           abortus S19]
 gi|254691365|ref|ZP_05154619.1| cytidine and deoxycytidylate deaminase family protein [Brucella
           abortus bv. 6 str. 870]
 gi|254695335|ref|ZP_05157163.1| cytidine and deoxycytidylate deaminase family protein [Brucella
           abortus bv. 3 str. Tulya]
 gi|254698431|ref|ZP_05160259.1| cytidine and deoxycytidylate deaminase family protein [Brucella
           abortus bv. 2 str. 86/8/59]
 gi|254699495|ref|ZP_05161323.1| cytidine and deoxycytidylate deaminase family protein [Brucella
           suis bv. 5 str. 513]
 gi|254702619|ref|ZP_05164447.1| cytidine and deoxycytidylate deaminase family protein [Brucella
           suis bv. 3 str. 686]
 gi|254706250|ref|ZP_05168078.1| cytidine and deoxycytidylate deaminase family protein [Brucella
           pinnipedialis M163/99/10]
 gi|254711456|ref|ZP_05173267.1| cytidine and deoxycytidylate deaminase family protein [Brucella
           pinnipedialis B2/94]
 gi|254712059|ref|ZP_05173870.1| cytidine and deoxycytidylate deaminase family protein [Brucella
           ceti M644/93/1]
 gi|254715129|ref|ZP_05176940.1| cytidine and deoxycytidylate deaminase family protein [Brucella
           ceti M13/05/1]
 gi|254731878|ref|ZP_05190456.1| cytidine and deoxycytidylate deaminase family protein [Brucella
           abortus bv. 4 str. 292]
 gi|256014990|ref|YP_003104999.1| cytidine and deoxycytidylate deaminase family protein [Brucella
           microti CCM 4915]
 gi|256029913|ref|ZP_05443527.1| cytidine and deoxycytidylate deaminase family protein [Brucella
           pinnipedialis M292/94/1]
 gi|256043124|ref|ZP_05446066.1| cytidine and deoxycytidylate deaminase family protein [Brucella
           melitensis bv. 1 str. Rev.1]
 gi|256059562|ref|ZP_05449761.1| cytidine and deoxycytidylate deaminase family protein [Brucella
           neotomae 5K33]
 gi|256111894|ref|ZP_05452850.1| cytidine and deoxycytidylate deaminase family protein [Brucella
           melitensis bv. 3 str. Ether]
 gi|256158082|ref|ZP_05456000.1| cytidine and deoxycytidylate deaminase family protein [Brucella
           ceti M490/95/1]
 gi|256252963|ref|ZP_05458499.1| cytidine and deoxycytidylate deaminase family protein [Brucella
           ceti B1/94]
 gi|256256550|ref|ZP_05462086.1| cytidine and deoxycytidylate deaminase family protein [Brucella
           abortus bv. 9 str. C68]
 gi|260166985|ref|ZP_05753796.1| cytidine and deoxycytidylate deaminase family protein [Brucella sp.
           F5/99]
 gi|260544385|ref|ZP_05820206.1| cytidine/deoxycytidylate deaminase [Brucella abortus NCTC 8038]
 gi|260564346|ref|ZP_05834831.1| cytidine/deoxycytidylate deaminase [Brucella melitensis bv. 1 str.
           16M]
 gi|260568473|ref|ZP_05838942.1| cytidine/deoxycytidylate deaminase [Brucella suis bv. 4 str. 40]
 gi|260756977|ref|ZP_05869325.1| CMP/dCMP deaminase zinc-binding protein [Brucella abortus bv. 6
           str. 870]
 gi|260759649|ref|ZP_05871997.1| CMP/dCMP deaminase zinc-binding protein [Brucella abortus bv. 4
           str. 292]
 gi|260762892|ref|ZP_05875224.1| CMP/dCMP deaminase zinc-binding protein [Brucella abortus bv. 2
           str. 86/8/59]
 gi|260882788|ref|ZP_05894402.1| cytidine/deoxycytidylate deaminase [Brucella abortus bv. 9 str.
           C68]
 gi|261215706|ref|ZP_05929987.1| CMP/dCMP deaminase zinc-binding protein [Brucella abortus bv. 3
           str. Tulya]
 gi|261216837|ref|ZP_05931118.1| CMP/dCMP deaminase zinc-binding protein [Brucella ceti M13/05/1]
 gi|261220056|ref|ZP_05934337.1| cytidine/deoxycytidylate deaminase [Brucella ceti B1/94]
 gi|261313693|ref|ZP_05952890.1| CMP/dCMP deaminase zinc-binding protein [Brucella pinnipedialis
           M163/99/10]
 gi|261319065|ref|ZP_05958262.1| CMP/dCMP deaminase zinc-binding protein [Brucella pinnipedialis
           B2/94]
 gi|261319704|ref|ZP_05958901.1| CMP/dCMP deaminase zinc-binding protein [Brucella ceti M644/93/1]
 gi|261323530|ref|ZP_05962727.1| cytidine/deoxycytidylate deaminase [Brucella neotomae 5K33]
 gi|261749950|ref|ZP_05993659.1| CMP/dCMP deaminase zinc-binding protein [Brucella suis bv. 5 str.
           513]
 gi|261753203|ref|ZP_05996912.1| CMP/dCMP deaminase zinc-binding protein [Brucella suis bv. 3 str.
           686]
 gi|261756372|ref|ZP_06000081.1| cytidine/deoxycytidylate deaminase [Brucella sp. F5/99]
 gi|265986931|ref|ZP_06099488.1| CMP/dCMP deaminase zinc-binding protein [Brucella pinnipedialis
           M292/94/1]
 gi|265989556|ref|ZP_06102113.1| CMP/dCMP deaminase zinc-binding protein [Brucella melitensis bv. 1
           str. Rev.1]
 gi|265993342|ref|ZP_06105899.1| cytidine/deoxycytidylate deaminase [Brucella melitensis bv. 3 str.
           Ether]
 gi|265996597|ref|ZP_06109154.1| CMP/dCMP deaminase zinc-binding protein [Brucella ceti M490/95/1]
 gi|294853219|ref|ZP_06793891.1| cytosine deaminase [Brucella sp. NVSL 07-0026]
 gi|62197345|gb|AAX75644.1| cytidine and deoxycytidylate deaminase family protein [Brucella
           abortus bv. 1 str. 9-941]
 gi|82939409|emb|CAJ12363.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [Brucella
           melitensis biovar Abortus 2308]
 gi|161337093|gb|ABX63397.1| CMP/dCMP deaminase zinc-binding [Brucella canis ATCC 23365]
 gi|189020985|gb|ACD73706.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [Brucella
           abortus S19]
 gi|255997650|gb|ACU49337.1| cytidine and deoxycytidylate deaminase family protein [Brucella
           microti CCM 4915]
 gi|260097656|gb|EEW81530.1| cytidine/deoxycytidylate deaminase [Brucella abortus NCTC 8038]
 gi|260151989|gb|EEW87082.1| cytidine/deoxycytidylate deaminase [Brucella melitensis bv. 1 str.
           16M]
 gi|260155138|gb|EEW90219.1| cytidine/deoxycytidylate deaminase [Brucella suis bv. 4 str. 40]
 gi|260669967|gb|EEX56907.1| CMP/dCMP deaminase zinc-binding protein [Brucella abortus bv. 4
           str. 292]
 gi|260673313|gb|EEX60134.1| CMP/dCMP deaminase zinc-binding protein [Brucella abortus bv. 2
           str. 86/8/59]
 gi|260677085|gb|EEX63906.1| CMP/dCMP deaminase zinc-binding protein [Brucella abortus bv. 6
           str. 870]
 gi|260872316|gb|EEX79385.1| cytidine/deoxycytidylate deaminase [Brucella abortus bv. 9 str.
           C68]
 gi|260917313|gb|EEX84174.1| CMP/dCMP deaminase zinc-binding protein [Brucella abortus bv. 3
           str. Tulya]
 gi|260918640|gb|EEX85293.1| cytidine/deoxycytidylate deaminase [Brucella ceti B1/94]
 gi|260921926|gb|EEX88494.1| CMP/dCMP deaminase zinc-binding protein [Brucella ceti M13/05/1]
 gi|261292394|gb|EEX95890.1| CMP/dCMP deaminase zinc-binding protein [Brucella ceti M644/93/1]
 gi|261298288|gb|EEY01785.1| CMP/dCMP deaminase zinc-binding protein [Brucella pinnipedialis
           B2/94]
 gi|261299510|gb|EEY03007.1| cytidine/deoxycytidylate deaminase [Brucella neotomae 5K33]
 gi|261302719|gb|EEY06216.1| CMP/dCMP deaminase zinc-binding protein [Brucella pinnipedialis
           M163/99/10]
 gi|261736356|gb|EEY24352.1| cytidine/deoxycytidylate deaminase [Brucella sp. F5/99]
 gi|261739703|gb|EEY27629.1| CMP/dCMP deaminase zinc-binding protein [Brucella suis bv. 5 str.
           513]
 gi|261742956|gb|EEY30882.1| CMP/dCMP deaminase zinc-binding protein [Brucella suis bv. 3 str.
           686]
 gi|262550894|gb|EEZ07055.1| CMP/dCMP deaminase zinc-binding protein [Brucella ceti M490/95/1]
 gi|262764212|gb|EEZ10244.1| cytidine/deoxycytidylate deaminase [Brucella melitensis bv. 3 str.
           Ether]
 gi|263000225|gb|EEZ12915.1| CMP/dCMP deaminase zinc-binding protein [Brucella melitensis bv. 1
           str. Rev.1]
 gi|264659128|gb|EEZ29389.1| CMP/dCMP deaminase zinc-binding protein [Brucella pinnipedialis
           M292/94/1]
 gi|294818874|gb|EFG35874.1| cytosine deaminase [Brucella sp. NVSL 07-0026]
          Length = 157

 Score =  198 bits (504), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 93/142 (65%), Positives = 110/142 (77%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  ALEEA  A  R E+P+GAV V + +II+RAGNR RE  DVTAHAEIL IR    +L 
Sbjct: 16  MDIALEEAHAAGERGEVPIGAVIVRDGEIIARAGNRTREFNDVTAHAEILTIRQAGEMLG 75

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
            E L + DLYVTLEPC MCAAAIS ARIRRLYYGAS+PKGGGIE+G +FYT  TCHH+PE
Sbjct: 76  SERLIDCDLYVTLEPCAMCAAAISFARIRRLYYGASDPKGGGIEHGGRFYTQPTCHHAPE 135

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
           IYPG  E  +R+I++DFF+E+R
Sbjct: 136 IYPGFCEADARKILKDFFREKR 157


>gi|225686059|ref|YP_002734031.1| cytidine and deoxycytidylate deaminase family protein [Brucella
           melitensis ATCC 23457]
 gi|256262820|ref|ZP_05465352.1| cytidine/deoxycytidylate deaminase [Brucella melitensis bv. 2 str.
           63/9]
 gi|225642164|gb|ACO02077.1| cytidine and deoxycytidylate deaminase family protein [Brucella
           melitensis ATCC 23457]
 gi|263092641|gb|EEZ16862.1| cytidine/deoxycytidylate deaminase [Brucella melitensis bv. 2 str.
           63/9]
 gi|326410383|gb|ADZ67447.1| cytidine and deoxycytidylate deaminase family protein [Brucella
           melitensis M28]
          Length = 157

 Score =  198 bits (504), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 93/142 (65%), Positives = 110/142 (77%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  ALEEA  A  R E+P+GAV V + +II+RAGNR RE  DVTAHAEIL IR    +L 
Sbjct: 16  MDIALEEAHAAGERGEVPIGAVIVRDGEIIARAGNRTREFNDVTAHAEILTIRQAGEMLG 75

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
            E L + DLYVTLEPC MCAAAIS ARIRRLYYGAS+PKGGGIE+G +FYT  TCHH+PE
Sbjct: 76  SERLIDCDLYVTLEPCAMCAAAISFARIRRLYYGASDPKGGGIEHGGRFYTQLTCHHAPE 135

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
           IYPG  E  +R+I++DFF+E+R
Sbjct: 136 IYPGFCEADARKILKDFFREKR 157


>gi|17989385|ref|NP_542018.1| cytosine deaminase [Brucella melitensis bv. 1 str. 16M]
 gi|148558663|ref|YP_001257252.1| cytidine and deoxycytidylate deaminase family protein [Brucella
           ovis ATCC 25840]
 gi|297249905|ref|ZP_06933606.1| cytosine deaminase [Brucella abortus bv. 5 str. B3196]
 gi|17985258|gb|AAL54282.1| cytosine deaminase [Brucella melitensis bv. 1 str. 16M]
 gi|148369948|gb|ABQ62820.1| cytidine and deoxycytidylate deaminase family protein [Brucella
           ovis ATCC 25840]
 gi|297173774|gb|EFH33138.1| cytosine deaminase [Brucella abortus bv. 5 str. B3196]
          Length = 204

 Score =  198 bits (503), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 93/142 (65%), Positives = 110/142 (77%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  ALEEA  A  R E+P+GAV V + +II+RAGNR RE  DVTAHAEIL IR    +L 
Sbjct: 63  MDIALEEAHAAGERGEVPIGAVIVRDGEIIARAGNRTREFNDVTAHAEILTIRQAGEMLG 122

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
            E L + DLYVTLEPC MCAAAIS ARIRRLYYGAS+PKGGGIE+G +FYT  TCHH+PE
Sbjct: 123 SERLIDCDLYVTLEPCAMCAAAISFARIRRLYYGASDPKGGGIEHGGRFYTQPTCHHAPE 182

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
           IYPG  E  +R+I++DFF+E+R
Sbjct: 183 IYPGFCEADARKILKDFFREKR 204


>gi|163844392|ref|YP_001622047.1| hypothetical protein BSUIS_B0208 [Brucella suis ATCC 23445]
 gi|163675115|gb|ABY39225.1| Hypothetical protein, conserved [Brucella suis ATCC 23445]
          Length = 157

 Score =  198 bits (503), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 92/142 (64%), Positives = 110/142 (77%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  ALEEA  A  R E+P+GA+ V + +II+RAGNR RE  DVTAHAEIL IR    +L 
Sbjct: 16  MDIALEEAHAAGERGEVPIGAIIVRDGEIIARAGNRTREFNDVTAHAEILTIRQAGEMLG 75

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
            E L + DLYVTLEPC MCAAAIS ARIRRLYYGAS+PKGGGIE+G +FYT  TCHH+PE
Sbjct: 76  SERLIDCDLYVTLEPCAMCAAAISFARIRRLYYGASDPKGGGIEHGGRFYTQPTCHHTPE 135

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
           IYPG  E  +R+I++DFF+E+R
Sbjct: 136 IYPGFCEADARKILKDFFREKR 157


>gi|326553676|gb|ADZ88315.1| cytidine and deoxycytidylate deaminase family protein [Brucella
           melitensis M5-90]
          Length = 142

 Score =  197 bits (502), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 93/142 (65%), Positives = 110/142 (77%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  ALEEA  A  R E+P+GAV V + +II+RAGNR RE  DVTAHAEIL IR    +L 
Sbjct: 1   MDIALEEAHAAGERGEVPIGAVIVRDGEIIARAGNRTREFNDVTAHAEILTIRQAGEMLG 60

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
            E L + DLYVTLEPC MCAAAIS ARIRRLYYGAS+PKGGGIE+G +FYT  TCHH+PE
Sbjct: 61  SERLIDCDLYVTLEPCAMCAAAISFARIRRLYYGASDPKGGGIEHGGRFYTQLTCHHAPE 120

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
           IYPG  E  +R+I++DFF+E+R
Sbjct: 121 IYPGFCEADARKILKDFFREKR 142


>gi|23499966|ref|NP_699406.1| cytidine and deoxycytidylate deaminase family protein [Brucella
           suis 1330]
 gi|23463547|gb|AAN33411.1| cytidine and deoxycytidylate deaminase family protein [Brucella
           suis 1330]
          Length = 157

 Score =  197 bits (502), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 93/142 (65%), Positives = 110/142 (77%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  ALEEA  A  R E+P+GAV V + +II+RAGNR RE  DVTAHAEIL IR    +L 
Sbjct: 16  MDIALEEAHAAGERGEVPIGAVIVRDGEIIARAGNRTREFNDVTAHAEILIIRQAGEMLG 75

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
            E L + DLYVTLEPC MCAAAIS ARIRRLYYGAS+PKGGGIE+G +FYT  TCHH+PE
Sbjct: 76  SERLIDCDLYVTLEPCAMCAAAISFARIRRLYYGASDPKGGGIEHGGRFYTQPTCHHAPE 135

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
           IYPG  E  +R+I++DFF+E+R
Sbjct: 136 IYPGFCEADARKILKDFFREKR 157


>gi|218461412|ref|ZP_03501503.1| putative nitrogen fixation symbiosis related protein [Rhizobium
           etli Kim 5]
          Length = 157

 Score =  197 bits (501), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 89/147 (60%), Positives = 113/147 (76%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
           K N FM  ALEEA+ A  R E+P+GAV V+++  +SR+GNR REL DVTAHAEI AIR+ 
Sbjct: 8   KTNRFMEMALEEARAAGERGEVPIGAVVVIDDIAVSRSGNRTRELNDVTAHAEIAAIRLA 67

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
           C  L QE L   DLYVTLEPCTMCAAAIS AR+RRLYYGA +PKGG ++NG +FY   TC
Sbjct: 68  CEALGQERLAGADLYVTLEPCTMCAAAISFARVRRLYYGAEDPKGGAVDNGVRFYAQPTC 127

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           HH+PE+Y G++E +S +I++ FF ++R
Sbjct: 128 HHAPEVYSGLNEVQSAEILRKFFSQKR 154


>gi|218674406|ref|ZP_03524075.1| CMP/dCMP deaminase zinc-binding protein [Rhizobium etli GR56]
          Length = 157

 Score =  197 bits (500), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 90/147 (61%), Positives = 112/147 (76%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
           K N FM  ALEEA+ A  R E+P+GAV V+++  +SR+GNR REL DVTAHAEI AIR+ 
Sbjct: 8   KTNRFMEMALEEARAAGERGEVPIGAVVVIDDIAVSRSGNRTRELNDVTAHAEIAAIRLA 67

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
           C  L QE L   DLYVTLEPCTMCAAAIS ARIRRLYYGA +PKGG ++NG +FY   TC
Sbjct: 68  CEALGQERLAGADLYVTLEPCTMCAAAISFARIRRLYYGAEDPKGGAVDNGVRFYAQPTC 127

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           HH+PE+Y G +E +S +I++ FF ++R
Sbjct: 128 HHAPEVYSGFNEVQSAEILRTFFSQKR 154


>gi|241203269|ref|YP_002974365.1| CMP/dCMP deaminase zinc-binding [Rhizobium leguminosarum bv.
           trifolii WSM1325]
 gi|240857159|gb|ACS54826.1| CMP/dCMP deaminase zinc-binding [Rhizobium leguminosarum bv.
           trifolii WSM1325]
          Length = 145

 Score =  194 bits (492), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 89/142 (62%), Positives = 110/142 (77%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  ALEEA+ A  R E+P+GAV V+++  +SR+GNR RELKDVTAHAEI AIR+ C  L 
Sbjct: 1   MEMALEEARAAGERGEVPIGAVVVIDDIAVSRSGNRTRELKDVTAHAEIAAIRLACEALG 60

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
           QE L   DLYVTLEPCTMCAAAIS ARIRRLYYGA +PKGGG++NG +FY   TCHH+PE
Sbjct: 61  QERLAGADLYVTLEPCTMCAAAISFARIRRLYYGAEDPKGGGVDNGVRFYGQPTCHHAPE 120

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
           +Y G +E +S  +++ FF +RR
Sbjct: 121 VYSGFNEVQSANLLRRFFSQRR 142


>gi|218682181|ref|ZP_03529782.1| CMP/dCMP deaminase zinc-binding protein [Rhizobium etli CIAT 894]
          Length = 145

 Score =  193 bits (490), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 88/142 (61%), Positives = 110/142 (77%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  ALEEA+ A  R E+P+GAV V+++  +SR+GNR REL DVTAHAEI AIR+ C  L 
Sbjct: 1   MEMALEEARAAGERGEVPIGAVVVIDDIAVSRSGNRTRELNDVTAHAEIAAIRLACEALG 60

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
           QE L   DLYVTLEPCTMCAAAIS ARIRRLYYGA +PKGGG++NG +FY   TCHH+PE
Sbjct: 61  QERLAGADLYVTLEPCTMCAAAISFARIRRLYYGAEDPKGGGVDNGVRFYAQPTCHHAPE 120

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
           +Y G +E +S +I++ FF ++R
Sbjct: 121 VYSGFNEVQSAEILRRFFSQKR 142


>gi|209548083|ref|YP_002280000.1| CMP/dCMP deaminase zinc-binding [Rhizobium leguminosarum bv.
           trifolii WSM2304]
 gi|209533839|gb|ACI53774.1| CMP/dCMP deaminase zinc-binding [Rhizobium leguminosarum bv.
           trifolii WSM2304]
          Length = 145

 Score =  192 bits (488), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 88/142 (61%), Positives = 110/142 (77%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  ALEEA+ A  R E+P+GAV V+++  +SR+GNR REL DVTAHAEI AIR+ C  L 
Sbjct: 1   MEMALEEARAAGERGEVPIGAVVVIDDIAVSRSGNRTRELNDVTAHAEIAAIRLACEGLG 60

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
           QE L   DLYVTLEPCTMCAAAIS ARIRRLYYGA +PKGGG++NG +FY   TCHH+PE
Sbjct: 61  QERLVGADLYVTLEPCTMCAAAISFARIRRLYYGAEDPKGGGVDNGVRFYAQPTCHHAPE 120

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
           +Y G +E +S +I++ FF ++R
Sbjct: 121 VYSGFNEVQSAEILRTFFSQKR 142


>gi|78101280|pdb|2A8N|A Chain A, Biochemical And Structural Studies Of A-To-I Editing By
           Trna:a34 Deaminases At The Wobble Position Of Transfer
           Rna
 gi|78101281|pdb|2A8N|B Chain B, Biochemical And Structural Studies Of A-To-I Editing By
           Trna:a34 Deaminases At The Wobble Position Of Transfer
           Rna
          Length = 144

 Score =  192 bits (487), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 86/144 (59%), Positives = 111/144 (77%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M +   FM  AL EA++A  R+E+P+GAV VL+ ++I+R+GNR REL DVTAHAEI  IR
Sbjct: 1   MAERTHFMELALVEARSAGERDEVPIGAVLVLDGRVIARSGNRTRELNDVTAHAEIAVIR 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
           M C  L QE LP  DLYVTLEPCTMCAAAIS ARIRRLYYGA +PKGG +E+G +F++  
Sbjct: 61  MACEALGQERLPGADLYVTLEPCTMCAAAISFARIRRLYYGAQDPKGGAVESGVRFFSQP 120

Query: 121 TCHHSPEIYPGISEQRSRQIIQDF 144
           TCHH+P++Y G++E  S +I++ F
Sbjct: 121 TCHHAPDVYSGLAESESAEILRQF 144


>gi|222147690|ref|YP_002548647.1| cytidine and deoxycytidylate deaminase [Agrobacterium vitis S4]
 gi|221734678|gb|ACM35641.1| cytidine and deoxycytidylate deaminase [Agrobacterium vitis S4]
          Length = 149

 Score =  191 bits (484), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 88/143 (61%), Positives = 107/143 (74%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  ALEEAQ A  R E+P+GAV V N  I++RAGN  R L+DVTAHAEILAIR  C IL
Sbjct: 7   FMDVALEEAQLAGARGEVPIGAVLVKNGVILARAGNETRALQDVTAHAEILAIRRACAIL 66

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
             E L   DLYVTLEPCTMCAAAIS ARIRRLYYGA + KGGG+++G +FY+  TCHH+P
Sbjct: 67  EDERLAGADLYVTLEPCTMCAAAISFARIRRLYYGAPDEKGGGVDHGARFYSQPTCHHAP 126

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           ++Y GI E  +  +++DFF  +R
Sbjct: 127 DVYAGIGETEAAALLKDFFTAKR 149


>gi|239833547|ref|ZP_04681875.1| CMP/dCMP deaminase zinc-binding [Ochrobactrum intermedium LMG 3301]
 gi|239821610|gb|EEQ93179.1| CMP/dCMP deaminase zinc-binding [Ochrobactrum intermedium LMG 3301]
          Length = 173

 Score =  189 bits (481), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 91/142 (64%), Positives = 108/142 (76%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  ALEEA+ A  R E+P+GAV V    II+RAGNR REL DVTAHAE+LAIR     L 
Sbjct: 32  MEIALEEARAAGARGEVPIGAVIVHQGTIIARAGNRTRELNDVTAHAEVLAIREAGETLQ 91

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
            E L   DLYVTLEPC MCAAAIS ARIRRLYYGA++PKGGG+E+G +FYT  TCHH PE
Sbjct: 92  SERLVGCDLYVTLEPCAMCAAAISFARIRRLYYGATDPKGGGVEHGPRFYTQPTCHHVPE 151

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
           IY G SE  S++I+++FF++RR
Sbjct: 152 IYAGFSEGDSQKILREFFRDRR 173


>gi|153010358|ref|YP_001371572.1| CMP/dCMP deaminase zinc-binding [Ochrobactrum anthropi ATCC 49188]
 gi|151562246|gb|ABS15743.1| CMP/dCMP deaminase zinc-binding [Ochrobactrum anthropi ATCC 49188]
          Length = 173

 Score =  189 bits (479), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 89/142 (62%), Positives = 107/142 (75%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  AL EA+ A  R E+P+GAV V    II+RAGNR RE  DVTAHAE+LAIR   + L 
Sbjct: 32  MEIALAEARAAGSRGEVPIGAVIVHQGTIIARAGNRTREFNDVTAHAEVLAIREAGKALQ 91

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
            E L + DLYVTLEPC MCA AIS ARIRRLYYGAS+PKGGG+E+G +FYT  TCHH PE
Sbjct: 92  SERLVDCDLYVTLEPCAMCATAISFARIRRLYYGASDPKGGGVEHGPRFYTQPTCHHVPE 151

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
           IY G SE  S++I++DFF+++R
Sbjct: 152 IYAGFSEGDSQKILRDFFRDKR 173


>gi|327191131|gb|EGE58176.1| CMP/dCMP deaminase zinc-binding protein [Rhizobium etli CNPAF512]
          Length = 145

 Score =  189 bits (479), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 86/142 (60%), Positives = 108/142 (76%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  ALEEA+ A  R E+P+GAV V+++  +SR+GNR RE  DVTAHAEI AIR+ C  L 
Sbjct: 1   MEMALEEARAAGERGEVPIGAVVVIDDIAVSRSGNRTRERNDVTAHAEIAAIRLACEALG 60

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
           QE L   DLYVTLEPCTMCAAAIS ARIRRLYYGA +PKGG ++NG +FY   TCHH+PE
Sbjct: 61  QERLAGADLYVTLEPCTMCAAAISFARIRRLYYGAEDPKGGAVDNGVRFYAQPTCHHAPE 120

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
           +Y G +E +S +I++ FF ++R
Sbjct: 121 VYSGFNEVQSAEILRTFFSQKR 142


>gi|163758411|ref|ZP_02165499.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [Hoeflea
           phototrophica DFL-43]
 gi|162284700|gb|EDQ34983.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [Hoeflea
           phototrophica DFL-43]
          Length = 148

 Score =  189 bits (479), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 86/146 (58%), Positives = 110/146 (75%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
           G  +M  ALEE + AA R E+PVGAV VL+ ++I+RAGNR REL DVTAHAEILAIR   
Sbjct: 3   GQGYMDLALEEGRQAAERGEVPVGAVIVLDGEVIARAGNRTRELNDVTAHAEILAIRQAA 62

Query: 64  RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123
             LS E L   DLYVTLEPCTMCAAAIS AR+RRLYY A + KGG + +G +F+   TCH
Sbjct: 63  MQLSSERLIGADLYVTLEPCTMCAAAISFARLRRLYYAADDEKGGAVTSGVRFFDQPTCH 122

Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149
           H+P++YPG++   + ++++DFF+ERR
Sbjct: 123 HAPDVYPGLAASDAMRLLKDFFRERR 148


>gi|114705782|ref|ZP_01438685.1| CMP/dCMP deaminase, zinc-binding protein [Fulvimarina pelagi
           HTCC2506]
 gi|114538628|gb|EAU41749.1| CMP/dCMP deaminase, zinc-binding protein [Fulvimarina pelagi
           HTCC2506]
          Length = 148

 Score =  187 bits (476), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 87/143 (60%), Positives = 108/143 (75%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  ALEEA+ AA R E+PVGAV V + +II++AGN  R  KD TAHAE+LAIR  C  L
Sbjct: 5   FMDEALEEARRAATRGEVPVGAVIVRDGEIIAKAGNETRAAKDPTAHAELLAIRRACLAL 64

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
             E L + DLYVTLEPC MCA AIS ARIRRLY+GA++PKGG +ENG +F++ +TCHH+P
Sbjct: 65  EAERLTDCDLYVTLEPCAMCAGAISFARIRRLYFGAADPKGGAVENGARFFSQSTCHHAP 124

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           EIY G+SE  S  +++ FF ERR
Sbjct: 125 EIYSGLSETASADLLKAFFAERR 147


>gi|15964553|ref|NP_384906.1| putative deaminase protein [Sinorhizobium meliloti 1021]
 gi|307314743|ref|ZP_07594339.1| CMP/dCMP deaminase zinc-binding [Sinorhizobium meliloti BL225C]
 gi|307320037|ref|ZP_07599458.1| CMP/dCMP deaminase zinc-binding [Sinorhizobium meliloti AK83]
 gi|15073731|emb|CAC45372.1| Putative tRNA-specific adenosine deaminase [Sinorhizobium meliloti
           1021]
 gi|306894252|gb|EFN25017.1| CMP/dCMP deaminase zinc-binding [Sinorhizobium meliloti AK83]
 gi|306898967|gb|EFN29613.1| CMP/dCMP deaminase zinc-binding [Sinorhizobium meliloti BL225C]
          Length = 149

 Score =  187 bits (476), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 86/149 (57%), Positives = 109/149 (73%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M +   FM  AL+EA+ AA R E+P+GAV VL+ K+I+ AGNR REL D+TAHAEI AIR
Sbjct: 1   MAETARFMQAALQEARKAAARGEVPIGAVVVLDGKMIAAAGNRTRELNDITAHAEIEAIR 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
                +  E L   DLYVTLEPCTMCAAAIS ARIRRLYYGA +PKGG ++NG +FY   
Sbjct: 61  HAAAAVGDERLSGADLYVTLEPCTMCAAAISFARIRRLYYGAEDPKGGAVDNGVRFYASP 120

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
           TCHH P++Y G++E+ +  I+++FF  RR
Sbjct: 121 TCHHVPDVYSGLAEREAADILREFFAGRR 149


>gi|116250665|ref|YP_766503.1| nitrogen fixation symbiosis related protein [Rhizobium
           leguminosarum bv. viciae 3841]
 gi|115255313|emb|CAK06388.1| putative nitrogen fixation symbiosis related protein [Rhizobium
           leguminosarum bv. viciae 3841]
          Length = 151

 Score =  187 bits (475), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 91/147 (61%), Positives = 112/147 (76%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
           K N FM  ALEEA+ A  R E+P+GAV V+++  +SR+GNR RELKDVTAHAEI AIR+ 
Sbjct: 2   KTNRFMEMALEEARAAGERGEVPIGAVVVVDDIAVSRSGNRTRELKDVTAHAEIAAIRLA 61

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
           C  L QE L   DLYVTLEPCTMCAAAIS ARIRRLYYGA +PKGG ++NG +FY   TC
Sbjct: 62  CEALGQERLVGADLYVTLEPCTMCAAAISFARIRRLYYGAEDPKGGAVDNGVRFYGQPTC 121

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           HH+PE+Y G +E +S  +++ FF +RR
Sbjct: 122 HHAPEVYSGFNEVQSADLLRKFFSQRR 148


>gi|227820996|ref|YP_002824966.1| putative cytidine and deoxycytidylate deaminase [Sinorhizobium
           fredii NGR234]
 gi|227339995|gb|ACP24213.1| putative cytidine and deoxycytidylate deaminase [Sinorhizobium
           fredii NGR234]
          Length = 150

 Score =  186 bits (473), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 83/149 (55%), Positives = 109/149 (73%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M +   +M  AL+EA+ AA R E+P+GAV VL+ ++++ AGNR REL+D+TAHAEI AIR
Sbjct: 2   MAETTRYMDAALDEARKAAARGEVPIGAVVVLDGEVVAAAGNRTRELRDITAHAEIEAIR 61

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
                +  E L   DLYVTLEPCTMCAAAIS ARIRRLYYGA +PKGG +ENG +FY   
Sbjct: 62  QAAAAVGDERLSGADLYVTLEPCTMCAAAISFARIRRLYYGAEDPKGGAVENGVRFYGSP 121

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
           TCHH P++Y G++E+ +  +++ FF  RR
Sbjct: 122 TCHHVPDVYSGLAEREAADLLRAFFTARR 150


>gi|46370356|gb|AAS89964.1| deaminase [Agrobacterium vitis]
          Length = 149

 Score =  186 bits (473), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 85/143 (59%), Positives = 107/143 (74%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  ALEEA+ A  R E+P+GAV V +  I+++AGN  R L+DVTAHAEILAIR  C IL
Sbjct: 7   FMDVALEEARLAGARGEVPIGAVLVKDGVILAQAGNETRALQDVTAHAEILAIRRACTIL 66

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
             E L   DLYVTLEPCTMCAAAIS ARIRRLYYGA + KGGG+++G +FY+  TCHH+P
Sbjct: 67  EDERLAGADLYVTLEPCTMCAAAISFARIRRLYYGAPDEKGGGVDHGARFYSQPTCHHAP 126

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           ++Y GI E  +  +++DFF  +R
Sbjct: 127 DVYAGIGETEAAALLKDFFTTKR 149


>gi|325292072|ref|YP_004277936.1| cytidine and deoxycytidylate deaminase [Agrobacterium sp. H13-3]
 gi|325059925|gb|ADY63616.1| cytidine and deoxycytidylate deaminase [Agrobacterium sp. H13-3]
          Length = 152

 Score =  186 bits (471), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 87/149 (58%), Positives = 113/149 (75%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M +   FM  AL EA+ A  R E+P+GAV V++ ++I+R+GNR REL DVTAHAEI  IR
Sbjct: 1   MAERTHFMELALAEARAAGERQEVPIGAVLVMDGRVIARSGNRTRELNDVTAHAEIAVIR 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
           M C  L QE LP  DLYVTLEPCTMCAAAIS ARIRRLYYGA +PKGG + +G +F++  
Sbjct: 61  MACEALEQERLPGADLYVTLEPCTMCAAAISFARIRRLYYGAEDPKGGAVHSGVRFFSQP 120

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
           TCHH+P++Y G++E  S +I++ FF+E+R
Sbjct: 121 TCHHAPDVYSGLAESESAEILRKFFREKR 149


>gi|86356480|ref|YP_468372.1| cytosine deaminase protein [Rhizobium etli CFN 42]
 gi|86280582|gb|ABC89645.1| cytosine deaminase protein [Rhizobium etli CFN 42]
          Length = 143

 Score =  185 bits (470), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 84/139 (60%), Positives = 106/139 (76%)

Query: 11  ALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEI 70
           ALEEA+ A  R E+P+GAV V++   +SR+GNR RE  DVTAHAEI AIR+ C  L QE 
Sbjct: 2   ALEEARAAGERGEVPIGAVVVIDGIAVSRSGNRTRERNDVTAHAEIAAIRLACEALGQER 61

Query: 71  LPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYP 130
           L   DLYVTLEPCTMC+AAIS ARIRRLYYGA +PKGG ++NG +FY   TCHH+PE+Y 
Sbjct: 62  LAGADLYVTLEPCTMCSAAISFARIRRLYYGAEDPKGGAVDNGVRFYAQPTCHHAPEVYS 121

Query: 131 GISEQRSRQIIQDFFKERR 149
           G +E +S +I++ FF ++R
Sbjct: 122 GFNEVQSAEILRTFFSQKR 140


>gi|218515307|ref|ZP_03512147.1| cytosine deaminase protein [Rhizobium etli 8C-3]
          Length = 170

 Score =  184 bits (468), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 90/147 (61%), Positives = 112/147 (76%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
           K N FM  ALEEA+ A  R E+P+GAV V+++  +SR+GNR REL DVTAHAEI AIR+ 
Sbjct: 5   KTNRFMEMALEEARAAGERGEVPIGAVVVVDDIAVSRSGNRTRELNDVTAHAEIAAIRLA 64

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
           C  L QE L   DLYVTLEPCTMCAAAIS ARI RLYYGA +PKGG ++NG +FYT  TC
Sbjct: 65  CEALGQERLAGADLYVTLEPCTMCAAAISFARIHRLYYGAEDPKGGAVDNGVRFYTQPTC 124

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           HH+PE+Y G +E +S +I++ FF ++R
Sbjct: 125 HHAPEVYSGFNEVQSAEILRTFFLQKR 151


>gi|150395640|ref|YP_001326107.1| CMP/dCMP deaminase zinc-binding [Sinorhizobium medicae WSM419]
 gi|150027155|gb|ABR59272.1| CMP/dCMP deaminase zinc-binding [Sinorhizobium medicae WSM419]
          Length = 149

 Score =  184 bits (467), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 84/149 (56%), Positives = 107/149 (71%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M     FM  AL+EA+ AA R E+P+GAV V   ++++ AGNR REL D+TAHAEI AIR
Sbjct: 1   MTDTAPFMQAALQEARKAAARGEVPIGAVIVHEGEVVAAAGNRTRELNDITAHAEIEAIR 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
           M    +  E L   DLYVTLEPCTMCAAAIS ARIRRLYYGA +PKGG ++NG +FY+  
Sbjct: 61  MAATAIGGERLSGADLYVTLEPCTMCAAAISFARIRRLYYGAEDPKGGAVDNGVRFYSSP 120

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
           TCHH P++Y G++E+ +  I++ FF  RR
Sbjct: 121 TCHHVPDVYSGLAEREAADILRAFFAARR 149


>gi|190890543|ref|YP_001977085.1| cytosine deaminase [Rhizobium etli CIAT 652]
 gi|190695822|gb|ACE89907.1| cytosine deaminase protein [Rhizobium etli CIAT 652]
          Length = 145

 Score =  182 bits (462), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 88/142 (61%), Positives = 110/142 (77%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  ALEEA+ A  R E+P+GAV V+++  +SR+GNR REL DVTAHAEI AIR+ C  L 
Sbjct: 1   MEMALEEARAAGERGEVPIGAVVVVDDIAVSRSGNRTRELNDVTAHAEIAAIRLACEALG 60

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
           QE L   DLYVTLEPCTMCAAAIS ARIRRLYYGA +PKGG ++NG +FYT  TCHH+PE
Sbjct: 61  QERLAGADLYVTLEPCTMCAAAISFARIRRLYYGAEDPKGGAVDNGVRFYTQPTCHHAPE 120

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
           +Y G +E +S +I++ FF ++R
Sbjct: 121 VYSGFNEVQSAEILRTFFLQKR 142


>gi|158424013|ref|YP_001525305.1| cytidine and deoxycytidylate deaminase family protein [Azorhizobium
           caulinodans ORS 571]
 gi|158330902|dbj|BAF88387.1| cytidine and deoxycytidylate deaminase family protein [Azorhizobium
           caulinodans ORS 571]
          Length = 147

 Score =  181 bits (458), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 83/144 (57%), Positives = 108/144 (75%)

Query: 6   VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
            FM  AL EA+ AA R E+PVGAV V N+++I+R GNR REL D TAHAE+  +R G + 
Sbjct: 4   TFMQTALSEARAAAERGEVPVGAVLVRNSQVIARDGNRTRELSDPTAHAEMQVLRAGAKA 63

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           L  E L   DLYVTLEPC MCA AIS ARIRRLYYGA +PKGG +++G +F+T  TCHH+
Sbjct: 64  LGAERLLTCDLYVTLEPCAMCAGAISFARIRRLYYGALDPKGGAVDSGPRFFTQPTCHHA 123

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
           P++Y GI+E+ S +I+++FF+ RR
Sbjct: 124 PDVYGGIAERHSAEILRNFFQARR 147


>gi|154247024|ref|YP_001417982.1| CMP/dCMP deaminase zinc-binding [Xanthobacter autotrophicus Py2]
 gi|154161109|gb|ABS68325.1| CMP/dCMP deaminase zinc-binding [Xanthobacter autotrophicus Py2]
          Length = 147

 Score =  178 bits (451), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 82/145 (56%), Positives = 108/145 (74%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
             +M  AL EA+ AA R E+PVGAV V   ++I+R GNR REL D TAHAE+L +R    
Sbjct: 3   GTYMQMALNEARAAAERGEVPVGAVLVRGAEVIARDGNRTRELNDPTAHAEVLVLRTAGA 62

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
            L  E L   DLYVTLEPC MCAAA+S ARIRRLYYGAS+PKGGG+E+G +F++  TCHH
Sbjct: 63  RLKSERLVNCDLYVTLEPCAMCAAALSFARIRRLYYGASDPKGGGVEHGPRFFSQPTCHH 122

Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149
            PE+Y GI+E+++ ++++ FF++RR
Sbjct: 123 MPEVYGGIAERQAAEVLRSFFQDRR 147


>gi|300024099|ref|YP_003756710.1| CMP/dCMP deaminase zinc-binding protein [Hyphomicrobium
           denitrificans ATCC 51888]
 gi|299525920|gb|ADJ24389.1| CMP/dCMP deaminase zinc-binding protein [Hyphomicrobium
           denitrificans ATCC 51888]
          Length = 145

 Score =  177 bits (450), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 84/143 (58%), Positives = 106/143 (74%), Gaps = 1/143 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           MS AL+EA+ AA R E+PVGAV V  +  ++  AGNR REL D TAHAEILAIR  C +L
Sbjct: 1   MSLALDEARAAAERGEVPVGAVIVSASGDVLVLAGNRTRELNDPTAHAEILAIRAACSVL 60

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
             E L + DLYVTLEPC MCAAAIS ARIRRLYYGA +PK GG+E+G + ++  TCHH+P
Sbjct: 61  ETERLVDCDLYVTLEPCPMCAAAISFARIRRLYYGAGDPKSGGVEHGPRIFSQQTCHHAP 120

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+YPG++E  S  +++ FF  +R
Sbjct: 121 EVYPGLAEPESAALLKSFFAAKR 143


>gi|118590701|ref|ZP_01548102.1| cytidine and deoxycytidylate deaminase [Stappia aggregata IAM
           12614]
 gi|118436677|gb|EAV43317.1| cytidine and deoxycytidylate deaminase [Stappia aggregata IAM
           12614]
          Length = 154

 Score =  177 bits (449), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 80/143 (55%), Positives = 103/143 (72%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  ALEEA  AA R E+PVGAV V    +I+R GNR  EL D TAHAE+L IR  C + 
Sbjct: 12  FMDLALEEAVKAADRGEVPVGAVLVRGGDVIARDGNRTLELNDPTAHAEVLVIRSACALA 71

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
             + LP+ DLYVTLEPC MCA AIS ARIRRLYYGA + KGG +++GT+F+   TCHH+P
Sbjct: 72  GSQRLPDCDLYVTLEPCPMCAGAISFARIRRLYYGAGDEKGGAVDHGTRFFCQPTCHHAP 131

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           ++Y GI E R+ ++++ FF+ +R
Sbjct: 132 DVYSGIGETRAGELLKTFFQAKR 154


>gi|240849921|ref|YP_002971310.1| cytidine and deoxycytidylate deaminase [Bartonella grahamii as4aup]
 gi|240267044|gb|ACS50632.1| cytidine and deoxycytidylate deaminase [Bartonella grahamii as4aup]
          Length = 148

 Score =  177 bits (448), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 83/142 (58%), Positives = 100/142 (70%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  AL EAQ AA ++E+PVGAV      II+RAGN  +   D T HAE+ AIRM C  L 
Sbjct: 6   MEIALLEAQWAAKKDEVPVGAVITRGKAIIARAGNFIKSAYDPTGHAEMRAIRMACETLQ 65

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
            E LP+ DLYVTLEPC MCAAAIS ARIRRLYY  ++PKGG IENG +FY   TCHH PE
Sbjct: 66  SERLPDCDLYVTLEPCAMCAAAISFARIRRLYYATNDPKGGAIENGPRFYQQPTCHHKPE 125

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
           IY G  E+ + Q+++DFF ++R
Sbjct: 126 IYSGFKEKEAAQLLKDFFVQKR 147


>gi|163867550|ref|YP_001608749.1| cytosine/adenosine deaminase [Bartonella tribocorum CIP 105476]
 gi|161017196|emb|CAK00754.1| Cytosine/adenosine deaminase [Bartonella tribocorum CIP 105476]
          Length = 148

 Score =  176 bits (445), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 83/142 (58%), Positives = 99/142 (69%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  AL EAQ AA ++E+PVGAV      II+RAGN  +   D T HAEI  IRM C  L 
Sbjct: 6   MEIALLEAQWAAKKDEVPVGAVITRGKTIIARAGNFIKTAYDPTGHAEIRVIRMACETLQ 65

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
            E LP+ DLYVTLEPC MCAAAIS ARIRRLYY  ++PKGG IENG +FY   TCHH PE
Sbjct: 66  SERLPDCDLYVTLEPCAMCAAAISFARIRRLYYATNDPKGGAIENGPRFYQQPTCHHKPE 125

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
           IY G  E+ + Q+++DFF ++R
Sbjct: 126 IYSGFKEKEAAQLLKDFFIQKR 147


>gi|148253230|ref|YP_001237815.1| tRNA-adenosine deaminase [Bradyrhizobium sp. BTAi1]
 gi|146405403|gb|ABQ33909.1| tRNA-adenosine deaminase [Bradyrhizobium sp. BTAi1]
          Length = 148

 Score =  174 bits (442), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 77/147 (52%), Positives = 106/147 (72%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
           K   FM  AL+ A++AA+  E+P+G V V +N +I+ A NR    +D TAHAEILA+R  
Sbjct: 2   KSPSFMDLALKAAESAAISGEVPIGCVVVRDNAVIATAANRTLTDRDPTAHAEILALRQA 61

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
            +++  E L + DLYVTLEPCTMCA AIS ARIRRLYYGA++PKGG +E+G +F+   TC
Sbjct: 62  AQVIGSERLVDCDLYVTLEPCTMCAGAISFARIRRLYYGAADPKGGAVESGVRFFAAPTC 121

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           HH PE+Y  + EQ++ ++++ FFK RR
Sbjct: 122 HHVPEVYSAVGEQQAAEMLKAFFKARR 148


>gi|49475071|ref|YP_033112.1| nitrogen fixation protein [Bartonella henselae str. Houston-1]
 gi|49237876|emb|CAF27072.1| Nitrogen fixation protein [Bartonella henselae str. Houston-1]
          Length = 148

 Score =  174 bits (440), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 81/142 (57%), Positives = 98/142 (69%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  AL EAQ AA ++E+PVGAV      II RAGN  +   D T HAEI  IRM C    
Sbjct: 6   MEIALLEAQWAAKKDEVPVGAVITRGQSIIVRAGNSIKAAYDPTGHAEIRVIRMACAAFQ 65

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
            E LP+ DLYVTLEPC MCAAAIS ARIRRLYY  S+PKGG IE+G + Y  +TCHHSPE
Sbjct: 66  SERLPDCDLYVTLEPCAMCAAAISFARIRRLYYATSDPKGGAIEHGPRLYKQSTCHHSPE 125

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
           +Y G  E+ + Q+++DFF ++R
Sbjct: 126 VYSGFKEKEAAQLLKDFFAQKR 147


>gi|90422427|ref|YP_530797.1| CMP/dCMP deaminase, zinc-binding [Rhodopseudomonas palustris
           BisB18]
 gi|90104441|gb|ABD86478.1| tRNA-adenosine deaminase [Rhodopseudomonas palustris BisB18]
          Length = 148

 Score =  173 bits (439), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 80/143 (55%), Positives = 100/143 (69%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  AL+ A+ A    E+P+G V VLNN +I+ AGNR    +D TAHAE+LAIR     L
Sbjct: 6   FMDLALKAAETAQNAGEVPIGCVIVLNNAVIASAGNRTLTDRDPTAHAEVLAIRQAAAAL 65

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
             E L   DLYVTLEPCTMCA AIS ARIRRLYYGA++PKGG +E+G +F+   TCHH P
Sbjct: 66  GSERLSGCDLYVTLEPCTMCAGAISFARIRRLYYGAADPKGGAVESGVRFFAQPTCHHVP 125

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+Y  + E RS Q+++ FF+ RR
Sbjct: 126 EVYSALGESRSAQMLRQFFQARR 148


>gi|307941692|ref|ZP_07657047.1| CMP/dCMP deaminase zinc-binding [Roseibium sp. TrichSKD4]
 gi|307775300|gb|EFO34506.1| CMP/dCMP deaminase zinc-binding [Roseibium sp. TrichSKD4]
          Length = 262

 Score =  173 bits (438), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 84/143 (58%), Positives = 107/143 (74%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  ALEEA+ AA R E+PVGAV V + K++++ GNR  EL D TAHAE+L IR  C  L
Sbjct: 117 FMDLALEEAEKAAARGEVPVGAVLVRDGKVLAKDGNRTLELNDPTAHAEVLVIRAACNTL 176

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
           + + LPE DLYVTLEPC MCA AIS ARIRRLYYGA + KGG +ENGT+F+   TCHH+P
Sbjct: 177 ASQRLPECDLYVTLEPCPMCAGAISFARIRRLYYGAGDTKGGAVENGTRFFCQPTCHHAP 236

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+Y G  EQ S ++++ FF+++R
Sbjct: 237 EVYSGFQEQASAELLKSFFQKKR 259


>gi|75676735|ref|YP_319156.1| cytidine/deoxycytidylate deaminase, zinc-binding region
           [Nitrobacter winogradskyi Nb-255]
 gi|74421605|gb|ABA05804.1| tRNA-adenosine deaminase [Nitrobacter winogradskyi Nb-255]
          Length = 148

 Score =  172 bits (436), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 79/143 (55%), Positives = 100/143 (69%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  ALE A+ A    E+P+G V V + +II+ AGNR    +D TAHAE+LA+R    +L
Sbjct: 6   FMDMALEAAEKAGQAGEVPIGCVIVRDGEIIAAAGNRTLTDRDPTAHAEVLALRAAAHVL 65

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
             E L   DLYVTLEPCTMCAAAIS ARIRRLYYGAS+PKGG +E G +F+   TCHH P
Sbjct: 66  GSERLTGCDLYVTLEPCTMCAAAISFARIRRLYYGASDPKGGAVEYGVRFFAAPTCHHRP 125

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+Y  + E ++  +++DFFK RR
Sbjct: 126 EVYSSVGESQAATLLRDFFKARR 148


>gi|319408052|emb|CBI81706.1| Cytosine/adenosine deaminase [Bartonella schoenbuchensis R1]
          Length = 161

 Score =  172 bits (435), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 80/142 (56%), Positives = 101/142 (71%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  AL EAQ AA ++EIPVGAV +    II+R GN  + + D T HAEI AIR+ C IL 
Sbjct: 6   MEIALLEAQLAAKQDEIPVGAVIMRGKTIIARVGNYTKTVCDPTGHAEIRAIRIACEILQ 65

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
            E +P+ DLYVTLEPC MCAAAIS ARIRRLYY  S+PKGG IE+G +FY   TCHH PE
Sbjct: 66  SERIPDCDLYVTLEPCAMCAAAISFARIRRLYYATSDPKGGAIEHGPRFYQQPTCHHIPE 125

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
           +Y G  E+ +  ++++FF ++R
Sbjct: 126 VYSGFKEKEASHLLKEFFAQKR 147


>gi|254473540|ref|ZP_05086936.1| cytosine deaminase [Pseudovibrio sp. JE062]
 gi|211957252|gb|EEA92456.1| cytosine deaminase [Pseudovibrio sp. JE062]
          Length = 148

 Score =  171 bits (433), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 78/145 (53%), Positives = 105/145 (72%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           + FM  AL EA+ A  R E+P+G V V + K++S AGNR  EL D TAHAE+LAIR   +
Sbjct: 3   STFMDMALNEARAAEARGEVPIGCVVVKDGKVLSAAGNRTLELNDPTAHAEVLAIREAGK 62

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
            L+ + L   DLYVTLEPC MCAAAIS ARIRRLYYGA + KGGG+++G +FY+  TCHH
Sbjct: 63  QLNSQRLEGCDLYVTLEPCPMCAAAISFARIRRLYYGAGDAKGGGVDHGVRFYSSPTCHH 122

Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149
           +P++Y G++E  S  +++ FF+ +R
Sbjct: 123 TPDVYSGLAETDSAAMLKTFFQGKR 147


>gi|146342901|ref|YP_001207949.1| putative cytidine and deoxycytidylate deaminase [Bradyrhizobium sp.
           ORS278]
 gi|146195707|emb|CAL79734.1| putative cytidine and deoxycytidylate deaminase [Bradyrhizobium sp.
           ORS278]
          Length = 148

 Score =  171 bits (433), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 76/143 (53%), Positives = 104/143 (72%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  AL+ A++AA+  E+P+G V V +  +I+ A NR    +D TAHAEILA+R   + +
Sbjct: 6   FMDLALKAAESAAISGEVPIGCVVVRDGTVIAAAANRTLTDRDPTAHAEILALRQAAQAI 65

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
             E L + DLYVTLEPCTMCA AIS ARIRRLYYGA++ KGG +E+G +F+   TCHH+P
Sbjct: 66  GSERLIDCDLYVTLEPCTMCAGAISFARIRRLYYGAADSKGGAVESGVRFFAAPTCHHAP 125

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+Y  + EQ+S Q++++FFK RR
Sbjct: 126 EVYSAVGEQQSAQMLREFFKARR 148


>gi|92118638|ref|YP_578367.1| CMP/dCMP deaminase, zinc-binding [Nitrobacter hamburgensis X14]
 gi|91801532|gb|ABE63907.1| tRNA-adenosine deaminase [Nitrobacter hamburgensis X14]
          Length = 148

 Score =  171 bits (432), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 75/143 (52%), Positives = 99/143 (69%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  ALE A +A    E+P+G V V + ++I+ AGNR    +D TAHAE+LA+R     +
Sbjct: 6   FMDLALEAANSAGKSGEVPIGCVIVRDGEVIAAAGNRTLTDRDPTAHAEVLALRAAAHAI 65

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
             E L + DLYVTLEPCTMCA AIS ARIRRLYYGA +PKGG +++G +F+   TCHH P
Sbjct: 66  GSERLTDCDLYVTLEPCTMCAGAISFARIRRLYYGAPDPKGGAVDSGVRFFAAPTCHHRP 125

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+YP + E  +  +++DFFK RR
Sbjct: 126 EVYPAVGESEAATLLRDFFKARR 148


>gi|49473908|ref|YP_031950.1| nitrogen fixation protein [Bartonella quintana str. Toulouse]
 gi|49239411|emb|CAF25749.1| Nitrogen fixation protein [Bartonella quintana str. Toulouse]
          Length = 148

 Score =  170 bits (430), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 78/142 (54%), Positives = 97/142 (68%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  AL EAQ A  ++E+PVGAV      II+R GN  +   D T HAE+  IRM C    
Sbjct: 6   MEIALLEAQWAEKKDEVPVGAVITHGQSIIARTGNYIKAAYDPTGHAEMRVIRMACETFQ 65

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
            E LP+ DLYVTLEPC MCAAAIS ARIRRLYY  S+PKGG IE+G +FY  +TCHH PE
Sbjct: 66  SERLPDCDLYVTLEPCAMCAAAISFARIRRLYYAISDPKGGAIEHGPRFYQQSTCHHRPE 125

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
           +Y G  E+ + Q+++DFF ++R
Sbjct: 126 VYSGFKEKEAAQLLKDFFAQKR 147


>gi|319405143|emb|CBI78749.1| Cytosine/adenosine deaminase [Bartonella sp. AR 15-3]
          Length = 150

 Score =  170 bits (430), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 76/142 (53%), Positives = 100/142 (70%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  AL EAQ+A  ++E+PVGAV      II+RAGN  ++  D T HAE+  IR+ C+I  
Sbjct: 6   MEIALLEAQSAKKQDEVPVGAVITHGQTIIARAGNYTKKSHDPTGHAEMRVIRIACQIFK 65

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
            E +PE DLYVTLEPCTMCAAAIS ARIR LYY   + KGG IE+G++FY  +TCHH P 
Sbjct: 66  SERIPECDLYVTLEPCTMCAAAISFARIRNLYYATKDSKGGAIEHGSRFYQQSTCHHKPN 125

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
           +Y G  E+ + Q+++DFF ++R
Sbjct: 126 VYSGFKEKEASQLLKDFFIQKR 147


>gi|299134221|ref|ZP_07027414.1| CMP/dCMP deaminase zinc-binding [Afipia sp. 1NLS2]
 gi|298590968|gb|EFI51170.1| CMP/dCMP deaminase zinc-binding [Afipia sp. 1NLS2]
          Length = 148

 Score =  168 bits (426), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 76/143 (53%), Positives = 105/143 (73%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  AL++A+ AA   E+P+G V V +  +I++AGNR    +D TAHAE++A+R   R L
Sbjct: 6   FMDLALKQAEIAASGGEVPIGCVVVHDGAVIAQAGNRTLADRDPTAHAEMVALREAARKL 65

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
            +E L + DLYVTLEPCTMCA AIS ARIRRLYYGA +PKGG I++G +F+   TCHH P
Sbjct: 66  GRERLTDCDLYVTLEPCTMCAGAISHARIRRLYYGALDPKGGAIDSGVRFFGSPTCHHVP 125

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           ++YP + E+++  +++DFFK RR
Sbjct: 126 DVYPAVGEEQAAALLRDFFKARR 148


>gi|126735087|ref|ZP_01750833.1| hypothetical protein RCCS2_14459 [Roseobacter sp. CCS2]
 gi|126715642|gb|EBA12507.1| hypothetical protein RCCS2_14459 [Roseobacter sp. CCS2]
          Length = 148

 Score =  167 bits (424), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 79/143 (55%), Positives = 102/143 (71%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M+ AL+EA+ A  R E+PVGAV V  + ++++AGN+ RE  D TAHAE+LAIR  C  L
Sbjct: 6   YMNVALDEARVAGARGEVPVGAVIVGPDGVVAQAGNQTRERSDPTAHAEVLAIRAACAAL 65

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
            QE L   DLYVTLEPC MCAAAIS ARI RLYYGA++PK GG+  G + ++ A CHH P
Sbjct: 66  GQERLIRCDLYVTLEPCPMCAAAISNARIARLYYGAADPKSGGVAQGPRVFSHAQCHHVP 125

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+Y GI  + S  +++DFF  RR
Sbjct: 126 EVYDGIGAKASEALLKDFFAGRR 148


>gi|27382607|ref|NP_774136.1| nitrogen fixation protein [Bradyrhizobium japonicum USDA 110]
 gi|27355779|dbj|BAC52761.1| nitrogen fixation protein [Bradyrhizobium japonicum USDA 110]
          Length = 152

 Score =  167 bits (423), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 74/147 (50%), Positives = 104/147 (70%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
           K   FM  AL+ A+NA    E+P+G V V N ++I+ A NR     D TAHAEI+A+R  
Sbjct: 6   KAPSFMDLALKTAENAGKAGEVPIGCVVVRNYEVIATAANRTLTDYDPTAHAEIVALREA 65

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
            + +  E L + DLYVTLEPCTMCA AIS AR+RRLYYGA++PKGG +E+G +F+   TC
Sbjct: 66  AKKIGSERLVDCDLYVTLEPCTMCAGAISFARVRRLYYGAADPKGGAVESGVRFFASPTC 125

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           HH+P++Y G+ E  + +++++FF+ERR
Sbjct: 126 HHAPDVYSGVGESEAARLLKEFFRERR 152


>gi|119386848|ref|YP_917903.1| CMP/dCMP deaminase, zinc-binding [Paracoccus denitrificans PD1222]
 gi|119377443|gb|ABL72207.1| CMP/dCMP deaminase, zinc-binding protein [Paracoccus denitrificans
           PD1222]
          Length = 149

 Score =  167 bits (423), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 81/143 (56%), Positives = 103/143 (72%), Gaps = 1/143 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  AL+EA+ AA R E+PVGAV V  +  +++RAGNR RE++D TAHAEILAIR  C  L
Sbjct: 7   MPTALDEARAAARRGEVPVGAVLVGADGAVLARAGNRTREMRDPTAHAEILAIRAACAHL 66

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
             E LP   L+VTLEPC MCAAAIS ARI  LYYGA +P+ GG+ +G + +    CHH P
Sbjct: 67  GSERLPGARLWVTLEPCPMCAAAISAARIEMLYYGAEDPRMGGVRHGARVFDHPQCHHRP 126

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           EI  GIS + SR+++Q+FF+ERR
Sbjct: 127 EIIDGISAEESRRLLQEFFRERR 149


>gi|209886356|ref|YP_002290213.1| tRNA-specific adenosine deaminase [Oligotropha carboxidovorans OM5]
 gi|209874552|gb|ACI94348.1| tRNA-specific adenosine deaminase [Oligotropha carboxidovorans OM5]
          Length = 181

 Score =  167 bits (422), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 78/143 (54%), Positives = 99/143 (69%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  AL +AQNA    E+P+G V V N  +I+ AGNR    +D TAHAE+LA+R     L
Sbjct: 39  FMDLALRQAQNAEANGEVPIGCVVVQNGTVIAAAGNRTITDRDPTAHAEMLALREAASKL 98

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
            +E L + DLYVTLEPCTMCA AIS ARIRRLYYGA +PKGG I++G +F+   TCHH P
Sbjct: 99  GRERLADCDLYVTLEPCTMCAGAISHARIRRLYYGALDPKGGAIDSGVRFFAQPTCHHVP 158

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+Y  + E  +  +++DFFK RR
Sbjct: 159 EVYSAVGEAEAAALLRDFFKTRR 181


>gi|13476818|ref|NP_108387.1| nitrogen fixation protein gene [Mesorhizobium loti MAFF303099]
 gi|14027579|dbj|BAB53848.1| nitrogen fixation protein gene [Mesorhizobium loti MAFF303099]
          Length = 149

 Score =  166 bits (419), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 85/149 (57%), Positives = 110/149 (73%), Gaps = 1/149 (0%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           MK+ + FM+ AL+EA+ AALR E+PVGAV    + ++++AGNR REL D TAHAE+L IR
Sbjct: 1   MKRPD-FMALALKEAEAAALRGEVPVGAVIANGSTVVAKAGNRTRELADPTAHAEMLVIR 59

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
             C  LS E L   DLYVTLEPC MCA AIS AR+RRLY+GA + KGG + NG +F+   
Sbjct: 60  EACGKLSSERLTGHDLYVTLEPCAMCAGAISFARLRRLYFGAPDEKGGAVVNGVRFFASP 119

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
           TCHH+P+IYPG+ E  +  +++DFFKERR
Sbjct: 120 TCHHTPDIYPGMGETEAALLLKDFFKERR 148


>gi|298293867|ref|YP_003695806.1| CMP/dCMP deaminase zinc-binding protein [Starkeya novella DSM 506]
 gi|296930378|gb|ADH91187.1| CMP/dCMP deaminase zinc-binding protein [Starkeya novella DSM 506]
          Length = 172

 Score =  165 bits (418), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 80/143 (55%), Positives = 101/143 (70%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  AL EA  A  R E+PVGAV V     ++  GNR REL D TAHAE++ IR    +L
Sbjct: 25  FMLLALAEAAKAGARGEVPVGAVLVRGGTALAAEGNRMRELADPTAHAEMMVIRAAASVL 84

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
             + L E DLYVTLEPCTMCA AIS AR+RR+YYGA +PKGG +ENG +F++ ATCHH P
Sbjct: 85  GSDRLAECDLYVTLEPCTMCAGAISFARLRRIYYGAPDPKGGAVENGVRFFSQATCHHRP 144

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E Y G+ E+ S +++++FF ERR
Sbjct: 145 EAYGGLGERESAELLREFFAERR 167


>gi|83309336|ref|YP_419600.1| cytosine/adenosine deaminase [Magnetospirillum magneticum AMB-1]
 gi|82944177|dbj|BAE49041.1| Cytosine/adenosine deaminase [Magnetospirillum magneticum AMB-1]
          Length = 148

 Score =  165 bits (418), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 83/146 (56%), Positives = 107/146 (73%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
           G  FM+ AL EA+ A+ R E+PVGAV V + ++I++AGNR  EL D TAHAE+LA+R   
Sbjct: 3   GPGFMTLALAEAEAASARGEVPVGAVIVKDGQVIAQAGNRVEELGDSTAHAEMLALRAAT 62

Query: 64  RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123
             L  + L + DLYVTLEPC MCAAAISLARIRRLY+GA +PK GG+E+G + +  ATCH
Sbjct: 63  LFLGDKRLEDCDLYVTLEPCPMCAAAISLARIRRLYFGAYDPKSGGVEHGAKVFDHATCH 122

Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149
           H PE+Y G+ E+RS  ++  FF ERR
Sbjct: 123 HRPEVYGGLEERRSASLLSRFFAERR 148


>gi|254502430|ref|ZP_05114581.1| Cytidine and deoxycytidylate deaminase zinc-binding region domain
           protein [Labrenzia alexandrii DFL-11]
 gi|222438501|gb|EEE45180.1| Cytidine and deoxycytidylate deaminase zinc-binding region domain
           protein [Labrenzia alexandrii DFL-11]
          Length = 155

 Score =  165 bits (417), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 83/145 (57%), Positives = 103/145 (71%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
             FM  ALEEA  AA R E+PVGAV V N +I++R GNR  EL D TAHAE+L IR  C 
Sbjct: 11  KTFMDLALEEAAAAAERGEVPVGAVLVRNGEIVARDGNRTLELNDPTAHAEVLVIRAACA 70

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
            L  + LP+ DLYVTLEPC MCA AIS ARIRRLYYGA + KGG +++GT+F+    CHH
Sbjct: 71  ALQSQRLPKCDLYVTLEPCAMCAGAISFARIRRLYYGAGDEKGGAVDHGTRFFHQPICHH 130

Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149
           +PE Y GI E++S  +++ FF+ RR
Sbjct: 131 APETYAGIGERQSAALLKAFFQGRR 155


>gi|304393183|ref|ZP_07375111.1| tRNA-specific adenosine deaminase [Ahrensia sp. R2A130]
 gi|303294190|gb|EFL88562.1| tRNA-specific adenosine deaminase [Ahrensia sp. R2A130]
          Length = 153

 Score =  165 bits (417), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 74/143 (51%), Positives = 100/143 (69%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  AL EA+ AA R E+PVGAV V + +++++AGNR  EL D +AHAE+L IR  C   
Sbjct: 11  FMEQALVEARAAAERGEVPVGAVLVRDGEVVAKAGNRTLELHDPSAHAELLVIRQACAAA 70

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
             + LP+ DLYVTLEPCT+CA AIS ARIRR+Y+ A + KGG + NG +F+   TCHH P
Sbjct: 71  KSQRLPDCDLYVTLEPCTLCATAISFARIRRVYFAADDAKGGAVTNGVRFFDQPTCHHEP 130

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+Y G+ E  + ++++ FF  RR
Sbjct: 131 EVYSGMCEVEAGELLRSFFAARR 153


>gi|91975752|ref|YP_568411.1| CMP/dCMP deaminase, zinc-binding [Rhodopseudomonas palustris BisB5]
 gi|91682208|gb|ABE38510.1| tRNA-adenosine deaminase [Rhodopseudomonas palustris BisB5]
          Length = 148

 Score =  164 bits (416), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 76/143 (53%), Positives = 99/143 (69%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  AL  A  A    E+P+G V V   ++I+ AGNR    +D TAHAE+LAIR   + L
Sbjct: 6   FMDLALAAANIAGRSGEVPIGCVIVRGGEVIATAGNRTLTDRDPTAHAELLAIREAAQKL 65

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
             E LP+ DLYVTLEPCTMCA AIS ARIRRLY+GA +PKGG +E+G +F+   TCHH+P
Sbjct: 66  GSERLPDCDLYVTLEPCTMCAGAISFARIRRLYFGAFDPKGGAVESGVRFFGQPTCHHAP 125

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+Y G+ E+ +  +++ FFK RR
Sbjct: 126 EVYSGVGEREAAAMLRAFFKARR 148


>gi|319406589|emb|CBI80231.1| Cytosine/adenosine deaminase [Bartonella sp. 1-1C]
          Length = 150

 Score =  164 bits (416), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 77/142 (54%), Positives = 96/142 (67%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  AL EAQ A  ++EIPVGAV      II+RAGN  +   D T HAE+  IR+ C+I  
Sbjct: 6   MEIALLEAQLAKKQDEIPVGAVITHGQTIIARAGNYIKTPHDPTGHAEMRVIRIACQIFK 65

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
            E +PE DLYVTLEPC MCAA IS ARIR LYY  S+PKGG IE+G +FY   TCHH P 
Sbjct: 66  SERIPECDLYVTLEPCAMCAATISFARIRNLYYATSDPKGGAIEHGPRFYQQQTCHHRPN 125

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
           +Y G  E+ + Q+++DFF ++R
Sbjct: 126 VYSGFKEKEASQLLKDFFIQKR 147


>gi|511885|gb|AAA96138.1| nitrogen fixation protein [Bradyrhizobium japonicum]
          Length = 142

 Score =  164 bits (415), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 72/142 (50%), Positives = 102/142 (71%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  AL+ A+NA    E+P+G V V N ++I+ A NR     D TAHAEI+A+R   + + 
Sbjct: 1   MDLALKTAENAGKAGEVPIGCVVVRNYEVIATAANRTLTDYDPTAHAEIVALREAAKKIG 60

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
            E L + DLYVTLEPCTMCA AIS AR+RRLYYGA++PKGG +E+G +F+   TCHH+P+
Sbjct: 61  SERLVDCDLYVTLEPCTMCAGAISFARVRRLYYGAADPKGGAVESGVRFFASPTCHHAPD 120

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
           +Y G+ E  + +++++FF+ERR
Sbjct: 121 VYSGVGESEAARLLKEFFRERR 142


>gi|319403672|emb|CBI77257.1| Cytosine/adenosine deaminase [Bartonella rochalimae ATCC BAA-1498]
          Length = 150

 Score =  163 bits (413), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 76/142 (53%), Positives = 97/142 (68%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  AL EAQ+A  ++EIPVGAV      II+RAGN  +   D T HAE+  IR+ C+I  
Sbjct: 6   MEIALLEAQSAKKQDEIPVGAVITHGQTIIARAGNYIKNPHDPTGHAEMRVIRIACQIFK 65

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
            E +PE D+YVTLEPC MCAAAIS ARIR LYY  S+ KGG IE+G +FY   TCHH P 
Sbjct: 66  SERIPECDIYVTLEPCAMCAAAISFARIRNLYYATSDSKGGAIEHGPRFYQQPTCHHRPN 125

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
           +Y G  E+ + Q+++DFF ++R
Sbjct: 126 VYSGFKEKEASQLLKDFFIQKR 147


>gi|89053709|ref|YP_509160.1| CMP/dCMP deaminase, zinc-binding [Jannaschia sp. CCS1]
 gi|88863258|gb|ABD54135.1| CMP/dCMP deaminase zinc-binding protein [Jannaschia sp. CCS1]
          Length = 142

 Score =  162 bits (411), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 79/142 (55%), Positives = 96/142 (67%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  AL++A+ AA R E+PVGAV   N +II+RAGNR RE  D T HAEILAIR  C  L 
Sbjct: 1   MEAALDQARQAAARGEVPVGAVISRNGEIIARAGNRTREDHDPTGHAEILAIRSACAALQ 60

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
            E LP  DL+VTLEPC  CAA IS ARIRRLYY A +PK GGI  G + +T    HH PE
Sbjct: 61  SERLPGCDLWVTLEPCPACAATISAARIRRLYYAAPDPKSGGIAQGPRIFTHPQAHHVPE 120

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
           IY G+ E+ +  +++DFF  +R
Sbjct: 121 IYTGLLEEEAATLLRDFFAGKR 142


>gi|319784273|ref|YP_004143749.1| CMP/dCMP deaminase zinc-binding protein [Mesorhizobium ciceri
           biovar biserrulae WSM1271]
 gi|317170161|gb|ADV13699.1| CMP/dCMP deaminase zinc-binding protein [Mesorhizobium ciceri
           biovar biserrulae WSM1271]
          Length = 149

 Score =  162 bits (410), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 84/149 (56%), Positives = 109/149 (73%), Gaps = 1/149 (0%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           MK+ + FM+ AL+EA+ AALR E+PVGAV      +++ AGNR REL D TAHAE+L IR
Sbjct: 1   MKRPD-FMALALKEAEAAALRGEVPVGAVIANGAGVVASAGNRTRELADPTAHAEMLVIR 59

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
             CR LS E L   DLYVTLEPC MCA AIS AR+RRLY+GA++ KGG + NG +F+   
Sbjct: 60  EACRKLSAERLTGHDLYVTLEPCAMCAGAISFARLRRLYFGAADDKGGAVVNGVRFFASP 119

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
           TCHH+P+IYPG+ E  +  +++ FF+ERR
Sbjct: 120 TCHHAPDIYPGMGETEAGLLLKGFFRERR 148


>gi|110632788|ref|YP_672996.1| CMP/dCMP deaminase, zinc-binding [Mesorhizobium sp. BNC1]
 gi|110283772|gb|ABG61831.1| CMP/dCMP deaminase, zinc-binding protein [Chelativorans sp. BNC1]
          Length = 171

 Score =  162 bits (410), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 81/143 (56%), Positives = 106/143 (74%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  AL+EA+ AA R E+PVGAV V + ++++ AGNR REL D TAHAE+LAIR  C   
Sbjct: 28  FMDAALQEARRAAARAEVPVGAVVVRDGRLLASAGNRTRELNDPTAHAEMLAIRAACEAE 87

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
             E L   DLYVTLEPC MCA AIS ARIRRLY+GAS+PKGGG+ +G +F+T  TCHH+P
Sbjct: 88  GAERLIGADLYVTLEPCAMCAGAISFARIRRLYFGASDPKGGGVIHGGRFFTQPTCHHAP 147

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+Y G+ E+ +  ++++FF  +R
Sbjct: 148 EVYEGLGEREAATLLKNFFAGKR 170


>gi|260463254|ref|ZP_05811455.1| CMP/dCMP deaminase zinc-binding [Mesorhizobium opportunistum
           WSM2075]
 gi|259030844|gb|EEW32119.1| CMP/dCMP deaminase zinc-binding [Mesorhizobium opportunistum
           WSM2075]
          Length = 149

 Score =  162 bits (410), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 83/149 (55%), Positives = 110/149 (73%), Gaps = 1/149 (0%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           MK+ + FM+ AL+EA+ AALR E+PVGAV      +++ AGNR REL D TAHAE+LAIR
Sbjct: 1   MKRPD-FMAVALKEAEAAALRGEVPVGAVIASGGTVVASAGNRTRELADPTAHAEMLAIR 59

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
             C  L+ E L   DLYVTLEPC MCA AIS AR+RRLY+GA++ KGG + NG +F+   
Sbjct: 60  EACGKLATERLTGHDLYVTLEPCAMCAGAISFARLRRLYFGAADEKGGAVVNGVRFFASP 119

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
           TCHH+P+IYPG++E  +  +++ FF+ERR
Sbjct: 120 TCHHAPDIYPGMAETEAGLLLKGFFRERR 148


>gi|288958823|ref|YP_003449164.1| CMP/dCMP deaminase [Azospirillum sp. B510]
 gi|288911131|dbj|BAI72620.1| CMP/dCMP deaminase [Azospirillum sp. B510]
          Length = 150

 Score =  162 bits (410), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 75/131 (57%), Positives = 97/131 (74%), Gaps = 2/131 (1%)

Query: 21  RNEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYV 78
           R E+PVGAV V      +++ AGNR  EL D +AHAE+LAIR  C    Q  LP  DLYV
Sbjct: 20  RGEVPVGAVIVDAATGTVLASAGNRTEELCDPSAHAELLAIRAACAERRQPRLPGCDLYV 79

Query: 79  TLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSR 138
           TLEPC +CAAAIS ARIRR+YYGA +PKGG +++G +F+T ATCHH+PE+Y GI E R+ 
Sbjct: 80  TLEPCALCAAAISFARIRRVYYGAYDPKGGAVDHGPRFFTQATCHHAPEVYSGIGETRAS 139

Query: 139 QIIQDFFKERR 149
            +++DFF++RR
Sbjct: 140 LLLRDFFRKRR 150


>gi|121602446|ref|YP_989463.1| cytidine and deoxycytidylate deaminase zinc-binding protein
           [Bartonella bacilliformis KC583]
 gi|120614623|gb|ABM45224.1| cytidine and deoxycytidylate deaminase zinc-binding protein
           [Bartonella bacilliformis KC583]
          Length = 148

 Score =  161 bits (408), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 77/142 (54%), Positives = 96/142 (67%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  AL EAQ AA + E+PVGAV      IISRAGN  ++  D T HAEI  IRM C  L 
Sbjct: 6   MEIALLEAQLAAEKGEVPVGAVITRGKTIISRAGNSIKKPYDPTGHAEIRVIRMACETLK 65

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
            E LP+ +LYVTLEPC MCAAAIS  RI+ LYY AS+ KGG IE+G + Y   TCHH P+
Sbjct: 66  SERLPDCNLYVTLEPCAMCAAAISFTRIQHLYYAASDSKGGAIEHGPRLYQQPTCHHRPD 125

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
           +Y G  E+ + Q+++DFF ++R
Sbjct: 126 VYSGFKEREAIQLLKDFFAQKR 147


>gi|220926362|ref|YP_002501664.1| CMP/dCMP deaminase [Methylobacterium nodulans ORS 2060]
 gi|219950969|gb|ACL61361.1| CMP/dCMP deaminase zinc-binding [Methylobacterium nodulans ORS
           2060]
          Length = 158

 Score =  161 bits (408), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 71/128 (55%), Positives = 94/128 (73%)

Query: 22  NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81
            E+PVGAV +    +++ AGNR R L+D TAHAEILAIR  C+ +  E L   DLYVTLE
Sbjct: 30  GEVPVGAVVMRGGTVLAVAGNRPRALRDPTAHAEILAIRAACQAIGDERLAGCDLYVTLE 89

Query: 82  PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141
           PC MCA AIS ARIRRLY+ A++PKGG +ENG + ++  TCHH+PE+Y G+ E  +  ++
Sbjct: 90  PCAMCAGAISFARIRRLYFAAADPKGGAVENGPRLFSQPTCHHAPEVYGGLREAEAAALL 149

Query: 142 QDFFKERR 149
           +DFF+ERR
Sbjct: 150 RDFFRERR 157


>gi|85717177|ref|ZP_01048135.1| cytidine/deoxycytidylate deaminase, zinc-binding region
           [Nitrobacter sp. Nb-311A]
 gi|85696010|gb|EAQ33910.1| cytidine/deoxycytidylate deaminase, zinc-binding region
           [Nitrobacter sp. Nb-311A]
          Length = 142

 Score =  161 bits (407), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 80/142 (56%), Positives = 100/142 (70%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  ALE A+ A    E+P+G V V + ++I+ AGNR    +D TAHAEILA+R   + L 
Sbjct: 1   MDMALEAAKKAGQAGEVPIGCVIVRDGEVIATAGNRTLTDRDPTAHAEILALRAAAQALG 60

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
            E L   DLYVTLEPCTMCAAAIS ARIRRLYYGAS+PKGG +E+G +F    TCHH PE
Sbjct: 61  SERLTGCDLYVTLEPCTMCAAAISFARIRRLYYGASDPKGGAVESGVRFLAAPTCHHRPE 120

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
           +YP + E R+  +++DFFK RR
Sbjct: 121 VYPSVGESRAAALLRDFFKTRR 142


>gi|23016531|ref|ZP_00056286.1| COG0590: Cytosine/adenosine deaminases [Magnetospirillum
           magnetotacticum MS-1]
          Length = 145

 Score =  161 bits (407), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 85/145 (58%), Positives = 110/145 (75%), Gaps = 1/145 (0%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           + FM+ AL EA+ A  R E+PVGAV V + +II+RAGNR  EL D TAHAE+LAIR    
Sbjct: 2   SAFMAQALAEAEAAGARGEVPVGAVVVQDGRIIARAGNRVEELGDPTAHAEMLAIRAAT- 60

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
           +L  + L + DLYVTLEPC MCAAAISLARIRRLY+GA +PK GG+E+G++ +  ATCHH
Sbjct: 61  VLGDKRLEDCDLYVTLEPCPMCAAAISLARIRRLYFGAYDPKSGGVEHGSKVFDHATCHH 120

Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149
            PE+Y G+ E+RS ++++ FF ERR
Sbjct: 121 RPEVYGGLEERRSAELLRVFFAERR 145


>gi|84515288|ref|ZP_01002650.1| hypothetical protein SKA53_01481 [Loktanella vestfoldensis SKA53]
 gi|84510571|gb|EAQ07026.1| hypothetical protein SKA53_01481 [Loktanella vestfoldensis SKA53]
          Length = 148

 Score =  160 bits (406), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 81/142 (57%), Positives = 99/142 (69%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  AL EA+ AA R E+PVGAV   +  II++AGNR REL D TAHAE+LAIR  C  L 
Sbjct: 7   MDIALTEARAAAARGEVPVGAVITQDGAIIAQAGNRTRELNDPTAHAEMLAIRAACAALG 66

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
           QE L   DLYVTLEPC MCAAAIS ARI RLYY A++PK GG+  G + +T   CHH P+
Sbjct: 67  QERLTGCDLYVTLEPCPMCAAAISNARIARLYYAAADPKSGGVAQGPRIFTHPQCHHRPD 126

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
           +Y GIS   + Q+++DFF  +R
Sbjct: 127 VYDGISATAAEQLLRDFFAAKR 148


>gi|218532085|ref|YP_002422901.1| CMP/dCMP deaminase zinc-binding [Methylobacterium chloromethanicum
           CM4]
 gi|218524388|gb|ACK84973.1| CMP/dCMP deaminase zinc-binding [Methylobacterium chloromethanicum
           CM4]
          Length = 147

 Score =  160 bits (404), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 74/128 (57%), Positives = 91/128 (71%)

Query: 22  NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81
            E+PVGA  V +  +++ AGNR R L D TAHAEILAIR  C  LS E L   DLYVTLE
Sbjct: 19  GEVPVGAAVVRDGAVLAVAGNRPRTLCDPTAHAEILAIRAACAALSDERLTGCDLYVTLE 78

Query: 82  PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141
           PC MCA AI+ ARIRRLYY AS+PKGGG+E+G + +   TCHH+PE+Y G  E  +  ++
Sbjct: 79  PCPMCAGAIAFARIRRLYYAASDPKGGGVEHGPRVFNQPTCHHAPEVYSGFREGEAAGLL 138

Query: 142 QDFFKERR 149
           +DFF ERR
Sbjct: 139 RDFFAERR 146


>gi|170744112|ref|YP_001772767.1| CMP/dCMP deaminase zinc-binding [Methylobacterium sp. 4-46]
 gi|168198386|gb|ACA20333.1| CMP/dCMP deaminase zinc-binding [Methylobacterium sp. 4-46]
          Length = 158

 Score =  159 bits (403), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 71/128 (55%), Positives = 95/128 (74%)

Query: 22  NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81
            E+PVGA  V +  +++ AGNR R L+D TAHAEILAIR  CR +  E L   DLYVTLE
Sbjct: 30  GEVPVGAAIVRDGTVLAVAGNRPRTLRDPTAHAEILAIRAACRAIGDERLIGCDLYVTLE 89

Query: 82  PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141
           PC MCAAAISLAR+RRLY+ A++PKGG +E+G +F+   TCHH+PE+Y G+ E  +  ++
Sbjct: 90  PCGMCAAAISLARLRRLYFAAADPKGGAVEHGPRFFAQPTCHHAPEVYGGLRESEAASLL 149

Query: 142 QDFFKERR 149
           ++FF+ RR
Sbjct: 150 REFFRARR 157


>gi|149200864|ref|ZP_01877839.1| hypothetical protein RTM1035_14602 [Roseovarius sp. TM1035]
 gi|149145197|gb|EDM33223.1| hypothetical protein RTM1035_14602 [Roseovarius sp. TM1035]
          Length = 153

 Score =  159 bits (403), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 80/144 (55%), Positives = 101/144 (70%), Gaps = 1/144 (0%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           +M  AL+EA+ AA R E+PVGAV V  +  I +RAGNR REL D TAHAEILAIR  C  
Sbjct: 6   YMDIALDEARAAAARGEVPVGAVIVTPSGAIAARAGNRTRELSDPTAHAEILAIRAACAA 65

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           L  E LP  DLYVTLEPC MCA+AI+  RI RLYYGA++PK GG+  G + ++   CHH 
Sbjct: 66  LGSERLPGHDLYVTLEPCAMCASAIAATRIARLYYGAADPKSGGVAMGARVFSHPQCHHV 125

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
           PEIY GI+   +  +++ FF++RR
Sbjct: 126 PEIYDGIAATEAETLLKTFFRDRR 149


>gi|296446445|ref|ZP_06888389.1| CMP/dCMP deaminase zinc-binding [Methylosinus trichosporium OB3b]
 gi|296256080|gb|EFH03163.1| CMP/dCMP deaminase zinc-binding [Methylosinus trichosporium OB3b]
          Length = 183

 Score =  159 bits (402), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 72/127 (56%), Positives = 94/127 (74%)

Query: 23  EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEP 82
           E+PVGA  V N  II+ AGNR    +D TAHAE+LAIR  C  L  E L + DLYVTLEP
Sbjct: 57  EVPVGATIVRNGAIIAVAGNRTLRDRDPTAHAEMLAIRAACATLRTERLTDCDLYVTLEP 116

Query: 83  CTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQ 142
           C MCAAAIS ARIRRLY+GA +PKGGG+E+G + ++  TCHH+PE+Y G+ E+ + ++++
Sbjct: 117 CAMCAAAISFARIRRLYFGAEDPKGGGVEHGARVFSQKTCHHAPEVYGGLREREAAELLR 176

Query: 143 DFFKERR 149
            FF+ RR
Sbjct: 177 AFFQARR 183


>gi|328545044|ref|YP_004305153.1| Cytidine and deoxycytidylate deaminase zinc-binding region domain
           protein [polymorphum gilvum SL003B-26A1]
 gi|326414788|gb|ADZ71851.1| Cytidine and deoxycytidylate deaminase zinc-binding region domain
           protein [Polymorphum gilvum SL003B-26A1]
          Length = 176

 Score =  159 bits (402), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 79/143 (55%), Positives = 104/143 (72%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  AL EA+NAA R E+PVGAV V + ++++  GNR  EL D TAHAE+L IR  C  L
Sbjct: 34  FMDLALAEARNAAARGEVPVGAVLVCDGRVVAADGNRTLELNDPTAHAEMLVIRAACAAL 93

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
             + L   DLYVTLEPC MCA AIS ARIRRLYYGA + KGG +++G +F+   TCHH+P
Sbjct: 94  GSQRLSGCDLYVTLEPCPMCAGAISFARIRRLYYGAGDEKGGAVDHGVRFFASPTCHHAP 153

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+Y GI E+ + ++++DFF++RR
Sbjct: 154 EVYAGIGERPAGELLKDFFRDRR 176


>gi|114773341|ref|ZP_01450545.1| hypothetical protein OM2255_12392 [alpha proteobacterium HTCC2255]
 gi|114546275|gb|EAU49186.1| hypothetical protein OM2255_12392 [alpha proteobacterium HTCC2255]
          Length = 150

 Score =  159 bits (402), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 83/149 (55%), Positives = 97/149 (65%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M     FM  A+ EA+ AA R E+PVGA+  +N +IIS AGNR RELKD TAHAEIL IR
Sbjct: 1   MNNFTSFMPIAIIEAKKAASRGEVPVGALIEINGEIISSAGNRTRELKDPTAHAEILVIR 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
             C IL  E L   +LYVTLEPC MCAAAIS  RI  LY+GA + K GGI  G   +   
Sbjct: 61  NACSILGVERLIGANLYVTLEPCPMCAAAISNTRIANLYFGARDIKSGGINQGPCIFNHP 120

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             HH PEIY GISE   R+++ DFFK +R
Sbjct: 121 QSHHKPEIYDGISELECRKLLLDFFKHKR 149


>gi|115522956|ref|YP_779867.1| CMP/dCMP deaminase, zinc-binding [Rhodopseudomonas palustris
           BisA53]
 gi|115516903|gb|ABJ04887.1| tRNA-adenosine deaminase [Rhodopseudomonas palustris BisA53]
          Length = 148

 Score =  159 bits (401), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 72/128 (56%), Positives = 94/128 (73%)

Query: 22  NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81
            E+P+G V V + ++I+ A NR    +D TAHAEILAIR     L  E L + DLYVTLE
Sbjct: 21  GEVPIGCVIVRDGEVIATAHNRTLSDRDPTAHAEILAIRQAAASLGSERLVDCDLYVTLE 80

Query: 82  PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141
           PCTMCA AISLARIRRLYYGAS+PKGG +E+G +F+   TCHH+PE+Y  + E+RS  ++
Sbjct: 81  PCTMCAGAISLARIRRLYYGASDPKGGAVESGARFFAQPTCHHAPEVYSAVGERRSATLL 140

Query: 142 QDFFKERR 149
           ++FF+ RR
Sbjct: 141 REFFQARR 148


>gi|154251101|ref|YP_001411925.1| zinc-binding CMP/dCMP deaminase [Parvibaculum lavamentivorans DS-1]
 gi|154155051|gb|ABS62268.1| CMP/dCMP deaminase zinc-binding [Parvibaculum lavamentivorans DS-1]
          Length = 164

 Score =  158 bits (400), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 75/130 (57%), Positives = 96/130 (73%), Gaps = 1/130 (0%)

Query: 21  RNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVT 79
           R E+PVGAV V    ++++RAGNR  ELKD TAHAE+LAIR  C  +  E L   DLYVT
Sbjct: 34  RGEVPVGAVVVDGEGRVLARAGNRTLELKDPTAHAELLAIRAACAEIGSERLIGCDLYVT 93

Query: 80  LEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139
           LEPC MCA AIS ARIRRLYYGA++ KGGG+++G + +T  TCHH P++Y GI E+RS +
Sbjct: 94  LEPCAMCATAISFARIRRLYYGAADEKGGGVDHGPRIFTQPTCHHRPDVYGGIGERRSAE 153

Query: 140 IIQDFFKERR 149
           +++ FF  RR
Sbjct: 154 LLRSFFALRR 163


>gi|319898379|ref|YP_004158472.1| Cytosine/adenosine deaminase [Bartonella clarridgeiae 73]
 gi|319402343|emb|CBI75882.1| Cytosine/adenosine deaminase [Bartonella clarridgeiae 73]
          Length = 150

 Score =  158 bits (400), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 75/142 (52%), Positives = 94/142 (66%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  AL EAQ+A  + EIPVGAV      II+RAGN  +   D T HAE+  IR+ C+I  
Sbjct: 6   MEIALLEAQSAKKQAEIPVGAVITHGKTIIARAGNYIKTPYDPTGHAEMRVIRIACQIFK 65

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
            E +PE DLYVTLEPC MCAAAIS ARIR LYY   + KGG IE+G +FY   TCHH P 
Sbjct: 66  SERIPECDLYVTLEPCAMCAAAISFARIRNLYYATQDSKGGAIEHGPRFYQQPTCHHRPN 125

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
           +Y G  E+ +  +++DFF ++R
Sbjct: 126 VYSGFKEREATLLLKDFFSQKR 147


>gi|310816563|ref|YP_003964527.1| cytidine and deoxycytidylate deaminase family protein
           [Ketogulonicigenium vulgare Y25]
 gi|308755298|gb|ADO43227.1| cytidine and deoxycytidylate deaminase family protein
           [Ketogulonicigenium vulgare Y25]
          Length = 150

 Score =  157 bits (398), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 74/144 (51%), Positives = 101/144 (70%), Gaps = 1/144 (0%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           +M  ALEEA+ AA+R E+PVGAV +  + +II+RAGNR REL D TAHAE+LAIR  C +
Sbjct: 6   YMIHALEEAKLAAMRGEVPVGAVVIGPSGQIIARAGNRTRELHDPTAHAEVLAIRAACAV 65

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           +  E L + DLYVTLEPC +CA  I+ ARIRRLY+GA +PK GG+ +G + +    CHH 
Sbjct: 66  IGSERLIDHDLYVTLEPCPICAGTIAAARIRRLYFGAEDPKSGGVLHGARVFNHPQCHHR 125

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
           PE+Y  +    +  +++DFF  +R
Sbjct: 126 PEVYGDLGAPEAETLLRDFFAAKR 149


>gi|188583522|ref|YP_001926967.1| CMP/dCMP deaminase zinc-binding [Methylobacterium populi BJ001]
 gi|179347020|gb|ACB82432.1| CMP/dCMP deaminase zinc-binding [Methylobacterium populi BJ001]
          Length = 147

 Score =  157 bits (397), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 72/128 (56%), Positives = 90/128 (70%)

Query: 22  NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81
            E+PVGAV V +  +++ A NR R L D TAHAEILAIR  C  L  E L   DLYVTLE
Sbjct: 19  GEVPVGAVVVRDGAVLAVASNRPRALSDPTAHAEILAIRAACAALRDERLTGCDLYVTLE 78

Query: 82  PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141
           PC MCA AI+ ARIRRLYY AS+PKGGG+E+G + +   TCHH+PE+Y G  E  +  ++
Sbjct: 79  PCPMCAGAIAFARIRRLYYAASDPKGGGVEHGPRVFNQPTCHHAPEVYSGFREGEAAGLL 138

Query: 142 QDFFKERR 149
           +DFF +RR
Sbjct: 139 RDFFSQRR 146


>gi|163853270|ref|YP_001641313.1| CMP/dCMP deaminase zinc-binding [Methylobacterium extorquens PA1]
 gi|163664875|gb|ABY32242.1| CMP/dCMP deaminase zinc-binding [Methylobacterium extorquens PA1]
          Length = 147

 Score =  157 bits (396), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 72/128 (56%), Positives = 90/128 (70%)

Query: 22  NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81
            E+PVGA  V +  +++ AGNR R L D TAHAEILAIR  C  L  E L   DLYVTLE
Sbjct: 19  GEVPVGAAVVRDGTVLAVAGNRPRTLSDPTAHAEILAIRAACAALRDERLTGCDLYVTLE 78

Query: 82  PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141
           PC MCA AI+ ARIRRLYY AS+PKGGG+E+G + +   TCHH+PE+Y G  E  +  ++
Sbjct: 79  PCPMCAGAIAFARIRRLYYAASDPKGGGVEHGPRVFNQPTCHHAPEVYSGFREGEAAGLL 138

Query: 142 QDFFKERR 149
           ++FF ERR
Sbjct: 139 REFFAERR 146


>gi|240140677|ref|YP_002965157.1| tRNA-specific adenosine deaminase [Methylobacterium extorquens AM1]
 gi|240010654|gb|ACS41880.1| tRNA-specific adenosine deaminase [Methylobacterium extorquens AM1]
          Length = 147

 Score =  156 bits (394), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 72/128 (56%), Positives = 90/128 (70%)

Query: 22  NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81
            E+PVGA  V +  +++ AGNR R L D TAHAEILAIR  C  L  E L   DLYVTLE
Sbjct: 19  GEVPVGAAVVRDGTVLAVAGNRPRTLCDPTAHAEILAIRAACAALRDERLTGCDLYVTLE 78

Query: 82  PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141
           PC MCA AI+ ARIRRLYY AS+PKGGG+E+G + +   TCHH+PE+Y G  E  +  ++
Sbjct: 79  PCPMCAGAIAFARIRRLYYAASDPKGGGVEHGPRVFNQPTCHHAPEVYSGFRESEAAGLL 138

Query: 142 QDFFKERR 149
           ++FF ERR
Sbjct: 139 REFFAERR 146


>gi|254563191|ref|YP_003070286.1| tRNA-specific adenosine deaminase [Methylobacterium extorquens DM4]
 gi|254270469|emb|CAX26469.1| tRNA-specific adenosine deaminase [Methylobacterium extorquens DM4]
          Length = 147

 Score =  155 bits (392), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 72/128 (56%), Positives = 90/128 (70%)

Query: 22  NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81
            E+PVGA  V +  +++ AGNR R L D TAHAEILAIR  C  L  E L   DLYVTLE
Sbjct: 19  GEVPVGAAVVRDGTVLAVAGNRPRTLCDPTAHAEILAIRAACAALRDERLTGCDLYVTLE 78

Query: 82  PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141
           PC MCA AI+ ARIRRLYY AS+PKGGG+E+G + +   TCHH+PE+Y G  E  +  ++
Sbjct: 79  PCPMCAGAIAFARIRRLYYAASDPKGGGVEHGPRVFNQPTCHHAPEVYSGFREGEAAGLL 138

Query: 142 QDFFKERR 149
           ++FF ERR
Sbjct: 139 REFFAERR 146


>gi|68172021|ref|ZP_00545314.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [Ehrlichia
           chaffeensis str. Sapulpa]
 gi|88658306|ref|YP_507267.1| cytidine and deoxycytidylate deaminase family protein [Ehrlichia
           chaffeensis str. Arkansas]
 gi|67998558|gb|EAM85318.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [Ehrlichia
           chaffeensis str. Sapulpa]
 gi|88599763|gb|ABD45232.1| cytidine and deoxycytidylate deaminase family protein [Ehrlichia
           chaffeensis str. Arkansas]
          Length = 140

 Score =  155 bits (392), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 79/142 (55%), Positives = 97/142 (68%), Gaps = 4/142 (2%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  A+ +AQ   L  E+PVGAV V NN++IS A N N    D TAHAEILAIR  C+ILS
Sbjct: 1   MKLAISKAQEDLL--EVPVGAVIVHNNEVISSANNSNIHDIDPTAHAEILAIRNACKILS 58

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
             IL + D+YVTLEPC MCA AIS ++IRRLY+GA N K G IENG + +    CHH PE
Sbjct: 59  THILNQCDIYVTLEPCAMCAQAISFSKIRRLYFGAYNKKYGAIENGARIFQF--CHHVPE 116

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
           +Y GI E  + ++I DFFK+ R
Sbjct: 117 VYGGILEAENTKLITDFFKKLR 138


>gi|86748295|ref|YP_484791.1| CMP/dCMP deaminase, zinc-binding [Rhodopseudomonas palustris HaA2]
 gi|86571323|gb|ABD05880.1| tRNA-adenosine deaminase [Rhodopseudomonas palustris HaA2]
          Length = 148

 Score =  155 bits (391), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 77/143 (53%), Positives = 99/143 (69%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  AL  AQ A    E+P+G V V    +I+ AGNR    +D TAHAE+LAIR   R L
Sbjct: 6   FMDLALAAAQTAGQAGEVPIGCVIVRAGAVIASAGNRTLTDRDPTAHAELLAIREAARKL 65

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
             E L + DLYVTLEPCTMCA AIS ARIRRLY+GA +PKGG +E+G +F+   TCHH+P
Sbjct: 66  GSERLVDCDLYVTLEPCTMCAGAISFARIRRLYFGAFDPKGGAVESGVRFFGQPTCHHAP 125

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           EIY G+ E+ +  ++++FF+ RR
Sbjct: 126 EIYSGVGEREAAALLREFFRARR 148


>gi|39934239|ref|NP_946515.1| CMP/dCMP deaminase zinc-binding [Rhodopseudomonas palustris CGA009]
 gi|192289765|ref|YP_001990370.1| CMP/dCMP deaminase zinc-binding [Rhodopseudomonas palustris TIE-1]
 gi|39648087|emb|CAE26607.1| possible cytidine and deoxycytidylate deaminase [Rhodopseudomonas
           palustris CGA009]
 gi|192283514|gb|ACE99894.1| CMP/dCMP deaminase zinc-binding [Rhodopseudomonas palustris TIE-1]
          Length = 148

 Score =  155 bits (391), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 77/145 (53%), Positives = 101/145 (69%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           + FM  AL EA  AA   E+P+G V V +  +I++AGNR    +D TAHAE+LAIR    
Sbjct: 4   STFMELALAEAAAAAEAGEVPIGCVIVRDGVVIAKAGNRTLTDRDPTAHAELLAIREAAA 63

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
            L  E L + DLYVTLEPCTMCA AIS ARIRRLY+GA +PKGG +E+G +FY   TCHH
Sbjct: 64  KLGSERLVDCDLYVTLEPCTMCAGAISFARIRRLYFGAFDPKGGAVESGVRFYGQPTCHH 123

Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149
           +PE+Y  + E+ +  ++++FFK RR
Sbjct: 124 APEVYSAVGEREAATMLREFFKARR 148


>gi|255261482|ref|ZP_05340824.1| tRNA-specific adenosine deaminase [Thalassiobium sp. R2A62]
 gi|255103817|gb|EET46491.1| tRNA-specific adenosine deaminase [Thalassiobium sp. R2A62]
          Length = 147

 Score =  154 bits (390), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 75/143 (52%), Positives = 94/143 (65%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  ALE+A+ A  R E+PVGAV V + K+++  GNR RE  D TAHAE+LAIR  C   
Sbjct: 5   FMDQALEQARLAGARGEVPVGAVVVADGKVVAAQGNRTRERNDPTAHAEVLAIREACAAA 64

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
             E L   DLYVTLEPC MCA  IS ARI RLYYGA +PK GGI  G + +T + CHH P
Sbjct: 65  GSERLVGHDLYVTLEPCPMCATVISNARIARLYYGAGDPKSGGIVQGPRIFTHSQCHHVP 124

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+Y GI  + + ++++ FF   R
Sbjct: 125 EVYDGIGAEAASEMLRAFFAGLR 147


>gi|312113039|ref|YP_004010635.1| CMP/dCMP deaminase zinc-binding protein [Rhodomicrobium vannielii
           ATCC 17100]
 gi|311218168|gb|ADP69536.1| CMP/dCMP deaminase zinc-binding protein [Rhodomicrobium vannielii
           ATCC 17100]
          Length = 157

 Score =  154 bits (390), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 77/143 (53%), Positives = 97/143 (67%), Gaps = 1/143 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  AL EA+ AA   E PVGAV V  +  I  R  N    ++D   HAE+ AIR  C  +
Sbjct: 1   MQEALIEAERAAALGETPVGAVVVAPDGSIAGRGHNLVISVRDPFGHAEMRAIRQACEAV 60

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
             E LP  DLYVTLEPCTMCAAAIS ARIRRLY+GA + KGG +ENG +F++ ATCHH+P
Sbjct: 61  QSERLPGYDLYVTLEPCTMCAAAISFARIRRLYFGAWDEKGGAVENGVRFFSAATCHHAP 120

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           EIY GI++  +  +++ FF+ERR
Sbjct: 121 EIYGGIAQAEAAALLRAFFQERR 143


>gi|46203751|ref|ZP_00051027.2| COG0590: Cytosine/adenosine deaminases [Magnetospirillum
           magnetotacticum MS-1]
          Length = 152

 Score =  154 bits (389), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 72/128 (56%), Positives = 88/128 (68%)

Query: 22  NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81
            E+PVGAV V +  ++  AGNR R L D TAHAEILAIR  C  L  E L   DLYVTLE
Sbjct: 19  GEVPVGAVVVRDGVVLGVAGNRPRALSDPTAHAEILAIRAACTALQDERLTGCDLYVTLE 78

Query: 82  PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141
           PC MCA AIS ARIRRLYY AS+PKGGG+E+G + +   TCHH+PE+Y G     +  ++
Sbjct: 79  PCPMCAGAISFARIRRLYYAASDPKGGGVEHGPRVFNQPTCHHAPEVYSGFRAGEAAGLL 138

Query: 142 QDFFKERR 149
           ++FF  RR
Sbjct: 139 REFFAGRR 146


>gi|217979352|ref|YP_002363499.1| CMP/dCMP deaminase zinc-binding [Methylocella silvestris BL2]
 gi|217504728|gb|ACK52137.1| CMP/dCMP deaminase zinc-binding [Methylocella silvestris BL2]
          Length = 146

 Score =  154 bits (388), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 70/129 (54%), Positives = 90/129 (69%)

Query: 21  RNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80
           R E+PVGAV V +  I++RAGNR     D TAHAE+L IR   R L  + L   DLYVTL
Sbjct: 18  RGEVPVGAVIVRDGAILARAGNRTLADDDPTAHAEMLTIRAAARALGSQRLAGCDLYVTL 77

Query: 81  EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140
           EPC MCAAAIS AR+RRLY+ A +PKGG +E+G +F+   TCHH+PE+Y G+   +S  +
Sbjct: 78  EPCAMCAAAISFARVRRLYFAALDPKGGAVEHGPRFFAQPTCHHAPEVYEGLRASQSADL 137

Query: 141 IQDFFKERR 149
           ++ FF ERR
Sbjct: 138 LRRFFAERR 146


>gi|84686242|ref|ZP_01014137.1| cytidine and deoxycytidylate deaminase family protein
           [Maritimibacter alkaliphilus HTCC2654]
 gi|84665769|gb|EAQ12244.1| cytidine and deoxycytidylate deaminase family protein
           [Rhodobacterales bacterium HTCC2654]
          Length = 150

 Score =  153 bits (386), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 70/130 (53%), Positives = 91/130 (70%), Gaps = 1/130 (0%)

Query: 21  RNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVT 79
           R E+PVGAV V  +  I+++AGNR REL D TAHAE L IR  C     E LP+ DLYVT
Sbjct: 21  RGEVPVGAVLVGPDGTIVAQAGNRTRELSDPTAHAETLVIRAACAAAGSERLPDHDLYVT 80

Query: 80  LEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139
           LEPC MCAA IS ARIRRLYYGAS+PK GG  +G + ++   CHH+P++Y GI+   +  
Sbjct: 81  LEPCPMCAAVISFARIRRLYYGASDPKSGGTAHGARVFSHPQCHHAPDVYDGIAAAEAET 140

Query: 140 IIQDFFKERR 149
           +++ FF ++R
Sbjct: 141 LLKTFFGKKR 150


>gi|332185526|ref|ZP_08387274.1| cytidine and deoxycytidylate deaminase zinc-binding region family
           protein [Sphingomonas sp. S17]
 gi|332014504|gb|EGI56561.1| cytidine and deoxycytidylate deaminase zinc-binding region family
           protein [Sphingomonas sp. S17]
          Length = 142

 Score =  153 bits (386), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 75/142 (52%), Positives = 93/142 (65%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  AL+ A+ A    E+PVGAV V + +++S A N  R L D TAHAEI AIR     L 
Sbjct: 1   MRLALDAARRAGEEGEVPVGAVIVRHGQVVSVAANAPRRLHDPTAHAEIQAIRAAAEKLG 60

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
           +E L E DL+VTLEPC MCA AI+ ARI RLYY AS+PKGG +E+G +F+   TCHH PE
Sbjct: 61  RERLEECDLWVTLEPCAMCAGAIAHARIARLYYAASDPKGGAVEHGPRFFGQPTCHHRPE 120

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
           IY GI E     +++ FF  RR
Sbjct: 121 IYAGIGEAEGAALLRSFFAARR 142


>gi|316932708|ref|YP_004107690.1| CMP/dCMP deaminase zinc-binding protein [Rhodopseudomonas palustris
           DX-1]
 gi|315600422|gb|ADU42957.1| CMP/dCMP deaminase zinc-binding protein [Rhodopseudomonas palustris
           DX-1]
          Length = 148

 Score =  153 bits (386), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 76/145 (52%), Positives = 100/145 (68%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           + FM  AL EA  A    E+P+G V V +  +I++AGNR    +D TAHAE+LAIR    
Sbjct: 4   STFMELALAEAAAAGAAGEVPIGCVIVRDGVVIAKAGNRTLTDRDPTAHAELLAIRQASA 63

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
            L  E L + DLYVTLEPCTMCA AIS ARIRRLY+GA +PKGG +E+G +FY   TCHH
Sbjct: 64  KLGSERLVDCDLYVTLEPCTMCAGAISFARIRRLYFGAFDPKGGAVESGVRFYGQPTCHH 123

Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149
           +PE+Y  + E+ +  ++++FFK RR
Sbjct: 124 APEVYSAVGEREAAAMLREFFKARR 148


>gi|87198248|ref|YP_495505.1| tRNA-adenosine deaminase [Novosphingobium aromaticivorans DSM
           12444]
 gi|87133929|gb|ABD24671.1| tRNA-adenosine deaminase [Novosphingobium aromaticivorans DSM
           12444]
          Length = 151

 Score =  152 bits (385), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 71/142 (50%), Positives = 99/142 (69%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  AL+EA  AA   E+P+GAV V + K+++ A NR R L+D TAHAE+LAIR     L 
Sbjct: 10  MRLALDEALRAADEGEVPIGAVVVKDGKVVAAAHNRPRTLRDPTAHAEMLAIRAAAAQLG 69

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
           QE L   DL+V+LEPC MCA AI+ ARI R+YY AS+PKGG +E+G++ +   TC H PE
Sbjct: 70  QERLEGCDLWVSLEPCAMCAGAIAHARIARVYYAASDPKGGAVEHGSRVFDQPTCLHRPE 129

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
           +Y G+ E  + ++++ FF++RR
Sbjct: 130 VYSGMGEAEAAEMLRTFFRDRR 151


>gi|85705168|ref|ZP_01036268.1| hypothetical protein ROS217_04635 [Roseovarius sp. 217]
 gi|85670490|gb|EAQ25351.1| hypothetical protein ROS217_04635 [Roseovarius sp. 217]
          Length = 147

 Score =  152 bits (384), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 81/143 (56%), Positives = 102/143 (71%), Gaps = 1/143 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKI-ISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  AL+EA+ AALR E+PVGAV V  + + ++RAGNR REL D TAHAEILAIR  C  L
Sbjct: 1   METALDEARAAALRGEVPVGAVIVAPSGVLVARAGNRTRELSDPTAHAEILAIRAACAAL 60

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
             E L   DLYVTLEPC MCA+AI+ ARI RLYYGA++PK GG+  G + ++   CHH P
Sbjct: 61  GSERLTGHDLYVTLEPCAMCASAIASARIARLYYGAADPKSGGVAMGARVFSHPQCHHVP 120

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           EIY GI+   S  +++ FF++RR
Sbjct: 121 EIYDGIAATESETLLKTFFRDRR 143


>gi|90419974|ref|ZP_01227883.1| cytidine/deoxycytidylate deaminase [Aurantimonas manganoxydans
           SI85-9A1]
 gi|90336015|gb|EAS49763.1| cytidine/deoxycytidylate deaminase [Aurantimonas manganoxydans
           SI85-9A1]
          Length = 202

 Score =  152 bits (383), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 84/144 (58%), Positives = 107/144 (74%)

Query: 6   VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
            FM  ALEEA+ AA RNE PVGAV V  ++II+R GN  R+  D TAHAEI+AIR     
Sbjct: 58  TFMDIALEEARLAAARNETPVGAVIVRGDEIIARGGNETRQRNDPTAHAEIVAIRAAAAR 117

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           L  E LP+ DLYVTLEPC MCAAAIS ARIRRLYYGA++PKGGG++ G +F++  TCHH+
Sbjct: 118 LGSERLPDCDLYVTLEPCAMCAAAISFARIRRLYYGAADPKGGGVDAGPRFFSQPTCHHA 177

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
           PE+Y  I+ + S ++++ FF+ RR
Sbjct: 178 PEVYSDIAARESAELLRGFFQARR 201


>gi|144897625|emb|CAM74489.1| Cytidine/deoxycytidylate deaminase, zinc-binding region
           [Magnetospirillum gryphiswaldense MSR-1]
          Length = 146

 Score =  151 bits (382), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 72/129 (55%), Positives = 91/129 (70%)

Query: 21  RNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80
           R E+PVGAV V   ++I+  GNR  EL D TAHAE+  IR     L Q  L E DLYVTL
Sbjct: 18  RGEVPVGAVLVRAGQVIAADGNRVEELHDPTAHAEMQVIRAAATRLGQTRLEECDLYVTL 77

Query: 81  EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140
           EPC MCAAAI+ AR+RRLYYGA +PKGGG+E+G + +  +TCHH PEI  G+ E  +  +
Sbjct: 78  EPCPMCAAAIAHARLRRLYYGAYDPKGGGVEHGARVFERSTCHHRPEIVGGLREAENAAL 137

Query: 141 IQDFFKERR 149
           +QDFF++RR
Sbjct: 138 LQDFFRQRR 146


>gi|209966841|ref|YP_002299756.1| cytidine and deoxycytidylate deaminase, putative [Rhodospirillum
           centenum SW]
 gi|209960307|gb|ACJ00944.1| cytidine and deoxycytidylate deaminase, putative [Rhodospirillum
           centenum SW]
          Length = 158

 Score =  151 bits (381), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 74/132 (56%), Positives = 97/132 (73%), Gaps = 2/132 (1%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M  AL EA+ A  R E+PVGAV V      +++ AGNR  EL D TAHAE+LAIR  C +
Sbjct: 15  MRQALAEAEAAGQRGEVPVGAVIVDPATGAVVAAAGNRTEELADPTAHAEVLAIRAACAV 74

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           L    LP +DLYVTLEPC MCAAAIS AR+RR+Y+GA +PKGGG+++G +F+T  TCHH+
Sbjct: 75  LGAPRLPGLDLYVTLEPCAMCAAAISFARLRRVYFGAYDPKGGGVDHGPRFFTRTTCHHA 134

Query: 126 PEIYPGISEQRS 137
           P++Y GI+E+ +
Sbjct: 135 PDVYGGIAEREA 146


>gi|84501544|ref|ZP_00999716.1| hypothetical protein OB2597_15120 [Oceanicola batsensis HTCC2597]
 gi|84390165|gb|EAQ02724.1| hypothetical protein OB2597_15120 [Oceanicola batsensis HTCC2597]
          Length = 154

 Score =  151 bits (381), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 75/144 (52%), Positives = 97/144 (67%), Gaps = 1/144 (0%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           FM  AL+EA+ AA R E+PVGAV V    ++++R GNR RE  D +AHAE+L IR  C  
Sbjct: 9   FMHLALDEARAAAARGEVPVGAVLVSPGGEVVARDGNRTREKADPSAHAEMLVIRAACAA 68

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
              E LP  DLYVTLEPC MCAA I  ARI RLYYGA++PK GG+  G + +T   CHH 
Sbjct: 69  AGSERLPGHDLYVTLEPCPMCAAVIGAARIARLYYGAADPKSGGLGQGPRIFTHPQCHHV 128

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
           PE+Y GI  + +  +++ FF++RR
Sbjct: 129 PEVYDGIGAREAEDLLKGFFRDRR 152


>gi|88607031|ref|YP_504931.1| cytidine and deoxycytidylate deaminase family protein [Anaplasma
           phagocytophilum HZ]
 gi|88598094|gb|ABD43564.1| cytidine and deoxycytidylate deaminase family protein [Anaplasma
           phagocytophilum HZ]
          Length = 147

 Score =  150 bits (379), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 77/147 (52%), Positives = 100/147 (68%), Gaps = 4/147 (2%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
           + + +M  A+EEA +++   EIPVGA+ V N  II++A N   +  D TAHAEI+AIRM 
Sbjct: 2   RASAYMKIAMEEANSSS--GEIPVGALVVRNGVIIAKAHNLTIQNTDPTAHAEIVAIRMA 59

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
           C+ LS  IL   D+YVTLEPC MC  AISLARIRR+Y+GA N K GGIENG Q   L  C
Sbjct: 60  CKALSTHILDGCDIYVTLEPCAMCTQAISLARIRRIYFGACNEKLGGIENGAQ--VLKYC 117

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
            H PE+Y G  EQ + ++++ FFK+ R
Sbjct: 118 LHVPEVYGGFLEQENAELLKAFFKKMR 144


>gi|254488088|ref|ZP_05101293.1| tRNA-specific adenosine deaminase [Roseobacter sp. GAI101]
 gi|214044957|gb|EEB85595.1| tRNA-specific adenosine deaminase [Roseobacter sp. GAI101]
          Length = 151

 Score =  149 bits (377), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 75/144 (52%), Positives = 99/144 (68%), Gaps = 1/144 (0%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           FM+ ALEEA++AA R E+PVGA  V    ++++R+GNR REL D TAHAE+LAIR  C  
Sbjct: 6   FMNIALEEARDAAERGEVPVGAAVVSPQGQVVARSGNRTRELNDPTAHAEVLAIRAACAA 65

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
              E L    LYVTLEPC MCA AIS AR+  LYYGAS+PK GG+  G + ++   CHH 
Sbjct: 66  AGSERLGGYALYVTLEPCAMCAGAISAARVATLYYGASDPKSGGVAQGARVFSHPQCHHV 125

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
           PE+Y GI+  ++  +++DFF  +R
Sbjct: 126 PEVYDGIATAQAEVLLKDFFGGKR 149


>gi|254463267|ref|ZP_05076683.1| cytosine deaminase [Rhodobacterales bacterium HTCC2083]
 gi|206679856|gb|EDZ44343.1| cytosine deaminase [Rhodobacteraceae bacterium HTCC2083]
          Length = 157

 Score =  148 bits (374), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 74/149 (49%), Positives = 92/149 (61%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           + K   FM  AL EA+ A    E+PVGAV V +  II R  N  R   D +AHAEILAIR
Sbjct: 8   LMKFTSFMEAALVEARLAEAAGEVPVGAVVVKDGAIIGRGRNATRTGCDPSAHAEILAIR 67

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
             C +L Q+ L + DLYVTLEPC MCA AI+ AR+ RLYYGAS+PK GG+  G + +  A
Sbjct: 68  EACAVLGQDRLVDCDLYVTLEPCAMCAGAIAHARVARLYYGASDPKSGGVTVGARVFDHA 127

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             HH PE+Y GI    S  ++  FF  +R
Sbjct: 128 QSHHRPEVYDGIGADESGALLSAFFARKR 156


>gi|254441373|ref|ZP_05054866.1| Cytidine and deoxycytidylate deaminase zinc-binding region domain
           protein [Octadecabacter antarcticus 307]
 gi|198251451|gb|EDY75766.1| Cytidine and deoxycytidylate deaminase zinc-binding region domain
           protein [Octadecabacter antarcticus 307]
          Length = 151

 Score =  147 bits (372), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 71/130 (54%), Positives = 89/130 (68%), Gaps = 1/130 (0%)

Query: 21  RNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVT 79
           R E+P+GAV V     +I+ AGNR REL D TAHAEILAIR  C  L QE L   D+YVT
Sbjct: 20  RGEVPIGAVIVSPTGLVIAAAGNRTRELNDPTAHAEILAIRAACAELGQERLTGHDIYVT 79

Query: 80  LEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139
           LEPC MCAAAIS AR+ RLYYGAS+PK GG+    + ++   CHH+PE+Y G+S   S  
Sbjct: 80  LEPCPMCAAAISNARLARLYYGASDPKSGGVAQAPRVFSHPQCHHAPEVYDGLSADTSET 139

Query: 140 IIQDFFKERR 149
           +++ FF  +R
Sbjct: 140 LLKSFFAAKR 149


>gi|170746522|ref|YP_001752782.1| CMP/dCMP deaminase zinc-binding [Methylobacterium radiotolerans JCM
           2831]
 gi|170653044|gb|ACB22099.1| CMP/dCMP deaminase zinc-binding [Methylobacterium radiotolerans JCM
           2831]
          Length = 162

 Score =  147 bits (370), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 72/128 (56%), Positives = 91/128 (71%)

Query: 22  NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81
            E+PVGA  V +  +++ A NR REL D TAHAEILAIR  C  L  E L   DLYVTLE
Sbjct: 34  GEVPVGAAVVRDGTVLAVAHNRPRELHDPTAHAEILAIRAACATLGTERLVGCDLYVTLE 93

Query: 82  PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141
           PC MCA AIS ARIRRLYYGA++PKGGG+E+G + +   TCHH+PE+Y G  E+ +  ++
Sbjct: 94  PCPMCAGAISFARIRRLYYGAADPKGGGVEHGPRVFDQPTCHHAPEVYGGFREREAAALL 153

Query: 142 QDFFKERR 149
           + FF +RR
Sbjct: 154 RAFFAQRR 161


>gi|149914091|ref|ZP_01902623.1| cytidine and deoxycytidylate deaminase family protein [Roseobacter
           sp. AzwK-3b]
 gi|149812375|gb|EDM72206.1| cytidine and deoxycytidylate deaminase family protein [Roseobacter
           sp. AzwK-3b]
          Length = 157

 Score =  147 bits (370), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 72/129 (55%), Positives = 90/129 (69%), Gaps = 1/129 (0%)

Query: 22  NEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80
            E+PVGAV V    +I++RAGNR REL D TAHAEIL IR  C  +  E LP   LYVTL
Sbjct: 21  GEVPVGAVLVDPKGRIVARAGNRTRELSDPTAHAEILVIREACAAVGSERLPGYALYVTL 80

Query: 81  EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140
           EPC MCA AIS ARI RLYYGAS+PK GG+ +G + ++   CHH PEIY GI+   +  +
Sbjct: 81  EPCAMCATAISAARIARLYYGASDPKSGGVAHGARVFSHPQCHHVPEIYDGIAAAEAEAL 140

Query: 141 IQDFFKERR 149
           ++ FF++RR
Sbjct: 141 LKAFFRDRR 149


>gi|58617315|ref|YP_196514.1| hypothetical protein ERGA_CDS_05880 [Ehrlichia ruminantium str.
           Gardel]
 gi|58416927|emb|CAI28040.1| Conserved hypothetical protein (putative cytidine deaminase)
           [Ehrlichia ruminantium str. Gardel]
          Length = 145

 Score =  147 bits (370), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 77/143 (53%), Positives = 96/143 (67%), Gaps = 4/143 (2%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  A+ +AQ   L  E+PVGAV V N K+IS   N N +  D TAHAEIL+IR  C +L
Sbjct: 6   YMRLAIGKAQEDCL--EVPVGAVIVYNGKVISCQSNSNIKNCDPTAHAEILSIRHACIVL 63

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
           S  IL + D+YVTLEPC MCA AIS ARIRRLY+GA N K GGIENG + +    CH  P
Sbjct: 64  STHILNQCDMYVTLEPCAMCAQAISFARIRRLYFGAYNKKYGGIENGARVFHF--CHSVP 121

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+Y GI E+ + +++ DFFK  R
Sbjct: 122 EVYGGILEEENIRLMTDFFKRLR 144


>gi|307293957|ref|ZP_07573801.1| CMP/dCMP deaminase zinc-binding [Sphingobium chlorophenolicum L-1]
 gi|306880108|gb|EFN11325.1| CMP/dCMP deaminase zinc-binding [Sphingobium chlorophenolicum L-1]
          Length = 152

 Score =  144 bits (364), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 71/142 (50%), Positives = 93/142 (65%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  AL+ A++AA   E+P+GAV  L+ +I+    NRNR   D TAHAEI+AIR     L 
Sbjct: 11  MRRALDLARSAAEAGEVPIGAVVTLDGRIVGEGENRNRRDNDPTAHAEIVAIRAAAAHLG 70

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
              L   DL+VTLEPC MCA AIS ARI RLYY A++PKGG IE G +F+T   C H PE
Sbjct: 71  DFRLNGCDLWVTLEPCAMCAGAISHARIARLYYAAADPKGGAIEQGPRFFTQPQCLHRPE 130

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
           +Y G+++  +  +++DFF  RR
Sbjct: 131 VYGGLAQAEASMLLRDFFVARR 152


>gi|260425752|ref|ZP_05779732.1| cytidine/deoxycytidylate deaminase family protein [Citreicella sp.
           SE45]
 gi|260423692|gb|EEX16942.1| cytidine/deoxycytidylate deaminase family protein [Citreicella sp.
           SE45]
          Length = 149

 Score =  144 bits (364), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 64/117 (54%), Positives = 81/117 (69%)

Query: 33  NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISL 92
           + ++++ AGNR REL D +AHAEILA+R  C     E LP  DLYVTLEPC MCAAAIS 
Sbjct: 33  DGRVVAAAGNRTRELNDPSAHAEILALRAACADAGSERLPGHDLYVTLEPCPMCAAAISF 92

Query: 93  ARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
           AR+ RLYYGA++PK GG+  G + Y    CHH PE+Y GI+   S  +++ FF ERR
Sbjct: 93  ARVARLYYGAADPKSGGVAQGARVYAHPQCHHVPEVYDGIAAAESETLLRGFFAERR 149


>gi|73667189|ref|YP_303205.1| cytidine/deoxycytidylate deaminase, zinc-binding region [Ehrlichia
           canis str. Jake]
 gi|72394330|gb|AAZ68607.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [Ehrlichia
           canis str. Jake]
          Length = 139

 Score =  144 bits (364), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 77/142 (54%), Positives = 99/142 (69%), Gaps = 4/142 (2%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  A+ +AQ     +E+PVGAV V N+++IS + N N +  D TAHAEILAIR  C+ILS
Sbjct: 1   MKLAISKAQEDL--SEVPVGAVIVYNDEVISSSNNSNIQNTDPTAHAEILAIREACKILS 58

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
            +IL + D+YVTLEPC MCA AIS A++RRLY+GA N K G IENG + +    CHH PE
Sbjct: 59  TQILDQCDIYVTLEPCAMCAQAISFAKLRRLYFGAYNKKYGAIENGARIFQF--CHHVPE 116

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
           IY GI E  + ++I DFFK+ R
Sbjct: 117 IYGGILENENIKLITDFFKKLR 138


>gi|103488226|ref|YP_617787.1| CMP/dCMP deaminase, zinc-binding [Sphingopyxis alaskensis RB2256]
 gi|98978303|gb|ABF54454.1| tRNA-adenosine deaminase [Sphingopyxis alaskensis RB2256]
          Length = 155

 Score =  144 bits (362), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 73/142 (51%), Positives = 91/142 (64%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  AL+ A+ AA   E+PVGAV V +  +I+   NR RE  D TAHAEI+A+RM    L 
Sbjct: 10  MRRALDLARIAADWGEVPVGAVIVKDGAVIAEGHNRPRESHDPTAHAEIVAMRMAAAKLG 69

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
            E L   DLYVTLEPC MCA AI+ ARI RLYYGA +PKGG + +G + +   T HH PE
Sbjct: 70  NERLDGCDLYVTLEPCAMCAGAIAHARIARLYYGADDPKGGAVVHGPRLFAQPTVHHRPE 129

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
           IY GI E  +  +++ FF  RR
Sbjct: 130 IYDGIGESEAAGLLRAFFAARR 151


>gi|126739257|ref|ZP_01754951.1| cytidine and deoxycytidylate deaminase family protein [Roseobacter
           sp. SK209-2-6]
 gi|126719874|gb|EBA16582.1| cytidine and deoxycytidylate deaminase family protein [Roseobacter
           sp. SK209-2-6]
          Length = 154

 Score =  144 bits (362), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 77/145 (53%), Positives = 109/145 (75%), Gaps = 3/145 (2%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNK--IISRAGNRNRELKDVTAHAEILAIRMGCR 64
           +M+ AL+EA+ AA R E+PVGAV ++N+K  +++RAGNR REL D TAHAEIL +R GC+
Sbjct: 11  YMNLALDEARAAARRGEVPVGAV-LINSKGDVVARAGNRTRELNDPTAHAEILVLREGCK 69

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
            +  E L   DLYVTLEPC MCAAA++ ARI R+YYGAS+PK GG+ +G   ++    HH
Sbjct: 70  AIGSERLMGYDLYVTLEPCAMCAAALAAARISRIYYGASDPKSGGVAHGACVFSHPQAHH 129

Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149
            PE+Y GISE+ + ++++ FF+++R
Sbjct: 130 VPEVYEGISEREAAELLKVFFEQKR 154


>gi|57239296|ref|YP_180432.1| putative deaminase [Ehrlichia ruminantium str. Welgevonden]
 gi|58579261|ref|YP_197473.1| hypothetical protein ERWE_CDS_05970 [Ehrlichia ruminantium str.
           Welgevonden]
 gi|57161375|emb|CAH58299.1| putative deaminase [Ehrlichia ruminantium str. Welgevonden]
 gi|58417887|emb|CAI27091.1| Conserved hypothetical protein (putative cytidine deaminase)
           [Ehrlichia ruminantium str. Welgevonden]
          Length = 145

 Score =  143 bits (361), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 74/143 (51%), Positives = 96/143 (67%), Gaps = 4/143 (2%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  A+ +AQ   L  E+PVGAV V N K+IS   N N +  D TAHAEIL+IR  C +L
Sbjct: 6   YMRLAIGKAQEDCL--EVPVGAVIVYNGKVISCQNNSNVKNCDPTAHAEILSIRHACIVL 63

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
           S  IL + D+YVTLEPC MCA AIS ARIRRLY+GA N K GG+ENG + +    CH  P
Sbjct: 64  STHILNQCDMYVTLEPCAMCAQAISFARIRRLYFGAYNKKYGGVENGARVFHF--CHSVP 121

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+Y GI E+ + +++ +FF+  R
Sbjct: 122 EVYGGILEEENIRLMTNFFRRLR 144


>gi|182678875|ref|YP_001833021.1| CMP/dCMP deaminase zinc-binding [Beijerinckia indica subsp. indica
           ATCC 9039]
 gi|182634758|gb|ACB95532.1| CMP/dCMP deaminase zinc-binding [Beijerinckia indica subsp. indica
           ATCC 9039]
          Length = 151

 Score =  143 bits (361), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 78/142 (54%), Positives = 98/142 (69%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
            S A EEA  AA R E+PVGAV +    I++RAGN+    KD TAHAE+LAIR  C +L 
Sbjct: 10  FSLAFEEAHKAAARGEVPVGAVIMREGIILARAGNQVLADKDPTAHAEMLAIRQACAVLG 69

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
            E L   DLYVTLEPC MCAAAI+ AR+RRLY+ AS+PKGGG+E+G + +   TCHH  E
Sbjct: 70  SERLIGCDLYVTLEPCAMCAAAIAHARLRRLYFSASDPKGGGVEHGARIFAQPTCHHVTE 129

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
           IY G+ E  +  +++ FF ERR
Sbjct: 130 IYGGLRESEAAALLRAFFLERR 151


>gi|91206241|ref|YP_538596.1| cytosine deaminase [Rickettsia bellii RML369-C]
 gi|157827858|ref|YP_001496922.1| cytosine deaminase [Rickettsia bellii OSU 85-389]
 gi|91069785|gb|ABE05507.1| Cytosine deaminase [Rickettsia bellii RML369-C]
 gi|157803162|gb|ABV79885.1| Cytosine deaminase [Rickettsia bellii OSU 85-389]
          Length = 152

 Score =  143 bits (361), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 71/151 (47%), Positives = 100/151 (66%), Gaps = 2/151 (1%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILA 58
           M   N FM  AL++A+ A  +NE+PVGAV V   N KIIS++ N   E  +   HAEI+A
Sbjct: 1   MNFDNFFMREALKQAEIAFSKNEVPVGAVIVDRENQKIISKSYNNTEEKNNALYHAEIIA 60

Query: 59  IRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
           I   CRI+S + L + D+YVTLEPC MCAAAI+ +R++RL+YGAS+ K G +E+  +++ 
Sbjct: 61  INEACRIISSKNLSDYDIYVTLEPCAMCAAAIAHSRLKRLFYGASDSKHGAVESNLRYFN 120

Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
              C H PEIY GI  + S  +++ FFK+ R
Sbjct: 121 SKACFHRPEIYSGIFAEDSALLMKGFFKKIR 151


>gi|58584428|ref|YP_198001.1| cytosine/adenosine deaminase [Wolbachia endosymbiont strain TRS of
           Brugia malayi]
 gi|58418744|gb|AAW70759.1| Cytosine/adenosine deaminase [Wolbachia endosymbiont strain TRS of
           Brugia malayi]
          Length = 143

 Score =  143 bits (360), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 72/142 (50%), Positives = 94/142 (66%), Gaps = 5/142 (3%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  A+E+A+ A   +EIP+GAV V  + IIS A N +    D TAHAE+L IR  C +LS
Sbjct: 1   MEFAVEQAKLAKKNDEIPIGAVIVSGDNIISFAHNISN---DPTAHAEMLVIRQACELLS 57

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
             +L   D+YVTLEPC MCA AIS ARI+RLY+GA N KGGGIENG + +    C H PE
Sbjct: 58  TSVLCNADMYVTLEPCPMCAQAISFARIKRLYFGAYNSKGGGIENGAKIFQF--CSHVPE 115

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
           +Y G+ E     +++DFF++ R
Sbjct: 116 VYGGVLETECSFLLKDFFEKLR 137


>gi|56551192|ref|YP_162031.1| CMP/dCMP deaminase zinc-binding protein [Zymomonas mobilis subsp.
           mobilis ZM4]
 gi|260753167|ref|YP_003226060.1| CMP/dCMP deaminase zinc-binding [Zymomonas mobilis subsp. mobilis
           NCIMB 11163]
 gi|9931341|gb|AAG02151.1|AF212041_7 nitrogen fixation protein [Zymomonas mobilis subsp. mobilis ZM4]
 gi|56542766|gb|AAV88920.1| CMP/dCMP deaminase zinc-binding protein [Zymomonas mobilis subsp.
           mobilis ZM4]
 gi|258552530|gb|ACV75476.1| CMP/dCMP deaminase zinc-binding protein [Zymomonas mobilis subsp.
           mobilis NCIMB 11163]
          Length = 160

 Score =  142 bits (358), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 66/143 (46%), Positives = 95/143 (66%), Gaps = 1/143 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRE-LKDVTAHAEILAIRMGCRIL 66
           M  AL +A++AA + E+PVGAV     KII+ AGN  +    D T HAE+ A+R    +L
Sbjct: 17  MRQALLQAESAAHQGEVPVGAVVTFKGKIIAVAGNAMQPPFIDPTGHAEVRALRQAASVL 76

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L + DL+VTLEPC MCA AI+ ARIRRLYYGA +PKGG + +G + +   +CHH P
Sbjct: 77  GSSRLDQCDLWVTLEPCAMCAGAIATARIRRLYYGADDPKGGAVLSGVRLFFQPSCHHQP 136

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           EIY  +  +++ ++++ FFK++R
Sbjct: 137 EIYNDLGSRKASELLRQFFKQKR 159


>gi|241760863|ref|ZP_04758952.1| CMP/dCMP deaminase zinc-binding [Zymomonas mobilis subsp. mobilis
           ATCC 10988]
 gi|241374482|gb|EER63943.1| CMP/dCMP deaminase zinc-binding [Zymomonas mobilis subsp. mobilis
           ATCC 10988]
          Length = 160

 Score =  142 bits (357), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 66/143 (46%), Positives = 95/143 (66%), Gaps = 1/143 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRE-LKDVTAHAEILAIRMGCRIL 66
           M  AL +A++AA + E+PVGAV     KII+ AGN  +    D T HAE+ A+R    +L
Sbjct: 17  MRHALLQAESAAHQGEVPVGAVVTFKGKIIAVAGNAMQPPFIDPTGHAEVRALRQAASVL 76

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L + DL+VTLEPC MCA AI+ ARIRRLYYGA +PKGG + +G + +   +CHH P
Sbjct: 77  GSSRLDQCDLWVTLEPCAMCAGAIATARIRRLYYGADDPKGGAVLSGVRLFFQPSCHHQP 136

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           EIY  +  +++ ++++ FFK++R
Sbjct: 137 EIYNDLGSRKASELLRQFFKQKR 159


>gi|157829120|ref|YP_001495362.1| cytosine deaminase [Rickettsia rickettsii str. 'Sheila Smith']
 gi|165933844|ref|YP_001650633.1| tRNA-specific adenosine deaminase [Rickettsia rickettsii str. Iowa]
 gi|157801601|gb|ABV76854.1| cytosine deaminase [Rickettsia rickettsii str. 'Sheila Smith']
 gi|165908931|gb|ABY73227.1| tRNA-specific adenosine deaminase [Rickettsia rickettsii str. Iowa]
          Length = 168

 Score =  141 bits (356), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 69/148 (46%), Positives = 98/148 (66%), Gaps = 2/148 (1%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAIRM 61
            N FM  AL++A+ A  +NE+PVGAV V  LN KII+   N   E  +   HAEI+AI  
Sbjct: 12  NNFFMEQALKQAKIAFDKNEVPVGAVVVDRLNQKIIASTHNNTEEKNNALYHAEIIAINE 71

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
            C ++S + L + D+YVTLEPC MCAAAI+ +R++RL+YGAS+ K G IE+  +++  + 
Sbjct: 72  ACNLISSKNLNDYDIYVTLEPCAMCAAAIAHSRLKRLFYGASDSKHGAIESNLRYFNSSA 131

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
           C H PEIY GI  + S  ++++FFK  R
Sbjct: 132 CFHRPEIYSGILAEDSGLLMKEFFKRIR 159


>gi|238650838|ref|YP_002916693.1| tRNA-specific adenosine deaminase [Rickettsia peacockii str.
           Rustic]
 gi|238624936|gb|ACR47642.1| tRNA-specific adenosine deaminase [Rickettsia peacockii str.
           Rustic]
          Length = 168

 Score =  141 bits (356), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 68/148 (45%), Positives = 98/148 (66%), Gaps = 2/148 (1%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAIRM 61
            N FM  AL++A+ A  +NE+PVGAV V  LN KII+   N   E  +   HAEI+AI  
Sbjct: 12  NNFFMEQALKQAKIAFDKNEVPVGAVVVDRLNQKIIASTHNNTEEKNNALYHAEIIAINK 71

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
            C ++S + L + D+YVTLEPC MCAAAI+ +R++RL+YGAS+ K G +E+  +++  + 
Sbjct: 72  ACNLISSKNLNDYDIYVTLEPCAMCAAAIAHSRLKRLFYGASDSKHGAVESNLRYFNSSA 131

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
           C H PEIY GI  + S  ++++FFK  R
Sbjct: 132 CFHRPEIYSGILAEDSGLLMKEFFKRIR 159


>gi|294012909|ref|YP_003546369.1| putative deaminase [Sphingobium japonicum UT26S]
 gi|292676239|dbj|BAI97757.1| putative deaminase [Sphingobium japonicum UT26S]
          Length = 156

 Score =  141 bits (356), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 70/142 (49%), Positives = 90/142 (63%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  ALE A+ A    E+P+GAV  L+ + I    NRNR   D TAHAE++AIR     L 
Sbjct: 15  MRRALELARAAGEAGEVPIGAVVTLDGRTIGEGENRNRRDNDPTAHAEMVAIRAAAAHLG 74

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
              L   DL+VTLEPC MCA AIS ARI RLYY A++PKGG IE G +F+T   C H PE
Sbjct: 75  DFRLAGCDLWVTLEPCAMCAGAISHARIARLYYAAADPKGGAIEQGPRFFTQPQCLHRPE 134

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
           +Y G+++  +  +++DFF  RR
Sbjct: 135 VYGGLAQAEASTLLRDFFLARR 156


>gi|148555238|ref|YP_001262820.1| tRNA-adenosine deaminase [Sphingomonas wittichii RW1]
 gi|148500428|gb|ABQ68682.1| tRNA-adenosine deaminase [Sphingomonas wittichii RW1]
          Length = 150

 Score =  141 bits (355), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 67/128 (52%), Positives = 85/128 (66%)

Query: 22  NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81
            E+PVGAV V  +++++ A N      D TAHAEI AIR     L  + L + DLYVTLE
Sbjct: 23  GEVPVGAVIVRGDEVVAAAANAMCGGTDPTAHAEIEAIRAASARLGAQRLDDCDLYVTLE 82

Query: 82  PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141
           PC MCA AI+ AR+RRLYYGA +PKGG + NG +F+T  TCHH PE Y GI E  +  ++
Sbjct: 83  PCAMCAGAIAHARLRRLYYGADDPKGGAVANGPRFFTQPTCHHRPETYGGIGEGEAAALL 142

Query: 142 QDFFKERR 149
           +DFF  RR
Sbjct: 143 RDFFAARR 150


>gi|34581121|ref|ZP_00142601.1| cytosine deaminase [Rickettsia sibirica 246]
 gi|229587195|ref|YP_002845696.1| Cytosine deaminase [Rickettsia africae ESF-5]
 gi|28262506|gb|EAA26010.1| cytosine deaminase [Rickettsia sibirica 246]
 gi|228022245|gb|ACP53953.1| Cytosine deaminase [Rickettsia africae ESF-5]
          Length = 168

 Score =  141 bits (355), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 68/148 (45%), Positives = 98/148 (66%), Gaps = 2/148 (1%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAIRM 61
            N FM  AL++A+ A  +NE+PVGAV V  LN KII+   N   E  +   HAEI+AI  
Sbjct: 12  NNFFMEQALKQAKIAFDKNEVPVGAVVVDRLNQKIIASTHNNTEEKNNALYHAEIIAINE 71

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
            C ++S + L + D+YVTLEPC MCAAAI+ +R++RL+YGAS+ K G +E+  +++  + 
Sbjct: 72  ACNLISSKNLNDYDIYVTLEPCAMCAAAIAHSRLKRLFYGASDSKHGAVESNLRYFNSSA 131

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
           C H PEIY GI  + S  ++++FFK  R
Sbjct: 132 CFHRPEIYSGILAEDSGLLMKEFFKRIR 159


>gi|315500440|ref|YP_004089243.1| cmp/dcmp deaminase zinc-binding protein [Asticcacaulis excentricus
           CB 48]
 gi|315418452|gb|ADU15092.1| CMP/dCMP deaminase zinc-binding protein [Asticcacaulis excentricus
           CB 48]
          Length = 162

 Score =  140 bits (354), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 67/147 (45%), Positives = 99/147 (67%), Gaps = 2/147 (1%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
              M  AL+EA+ AA   E+P+GA+     +  II+RA N   +L D +AHAEILA+R  
Sbjct: 4   KTLMRLALDEAEKAAQAGEVPIGALIYDPSSKTIIARAKNAPIKLNDPSAHAEILALRAA 63

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
            +++    L ++ +YVTLEPC MCA A+S ARI R+ YGAS+PKGG +E+G +F+   TC
Sbjct: 64  GQVVGNYRLTDLWIYVTLEPCVMCAGALSHARIGRVIYGASDPKGGAVESGPRFFAQPTC 123

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           H +PE+  G+ E  + Q+++DFF++RR
Sbjct: 124 HWAPEVTGGVLEAETGQVLKDFFRQRR 150


>gi|254510248|ref|ZP_05122315.1| cytosine deaminase [Rhodobacteraceae bacterium KLH11]
 gi|221533959|gb|EEE36947.1| cytosine deaminase [Rhodobacteraceae bacterium KLH11]
          Length = 144

 Score =  140 bits (354), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 74/143 (51%), Positives = 101/143 (70%), Gaps = 1/143 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  ALE+A+ AA R E+PVGAV V  + ++++  GNR REL D TAHAEILA+R  C  +
Sbjct: 1   MKLALEQARAAADRGEVPVGAVIVAPDGQVVAADGNRTRELNDPTAHAEILALRAACAQV 60

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
             E LP+ DLYVTLEPC MCAAA++ ARIRR+YYGAS+PK GG+ +G + ++    HH P
Sbjct: 61  KSERLPDHDLYVTLEPCAMCAAALAAARIRRVYYGASDPKSGGVAHGARVFSHPQTHHRP 120

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+Y GI+   +  +++ FF  +R
Sbjct: 121 EVYDGIAADEAAALLKQFFAAQR 143


>gi|157804219|ref|YP_001492768.1| cytosine deaminase [Rickettsia canadensis str. McKiel]
 gi|157785482|gb|ABV73983.1| cytosine deaminase [Rickettsia canadensis str. McKiel]
          Length = 200

 Score =  140 bits (353), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 69/148 (46%), Positives = 99/148 (66%), Gaps = 2/148 (1%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAIRM 61
            N FM  AL++A+ A  +NE+PVGAV V  LN KII+ + N   E  +   HAEI+ I  
Sbjct: 12  NNFFMQQALKQARIAFDKNEVPVGAVIVDRLNQKIIASSYNNTEEKNNALYHAEIITINE 71

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
            C I+S + L + D+YVTLEPC MCAAAIS +R++RL+YG S+PK G +E+  +++  + 
Sbjct: 72  ACNIISCKNLNDYDIYVTLEPCAMCAAAISHSRLKRLFYGVSDPKHGAVESNLRYFNSSA 131

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
           C H PEIY GI  + S  ++++FFK+ R
Sbjct: 132 CFHRPEIYSGILAEDSGLLMKEFFKKIR 159


>gi|294678027|ref|YP_003578642.1| tRNA-specific adenosine deaminase [Rhodobacter capsulatus SB 1003]
 gi|294476847|gb|ADE86235.1| tRNA-specific adenosine deaminase [Rhodobacter capsulatus SB 1003]
          Length = 149

 Score =  140 bits (353), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 72/130 (55%), Positives = 92/130 (70%), Gaps = 1/130 (0%)

Query: 21  RNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVT 79
           R E+PVGAV V  + ++I+RAGNR REL D TAHAEILAIR  C  L  E L   DLYVT
Sbjct: 20  RGEVPVGAVIVAPDGRVIARAGNRTRELNDPTAHAEILAIRAACAALGSERLAGHDLYVT 79

Query: 80  LEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139
           LEPC MCAAA++ ARI RLYYGA +PK GG+  G + +    CHH PE+Y GI+ + + +
Sbjct: 80  LEPCPMCAAALANARIARLYYGAGDPKSGGVAQGPRIFAHPQCHHVPEVYDGIAAEPAEK 139

Query: 140 IIQDFFKERR 149
           ++++FF  RR
Sbjct: 140 LLKEFFAARR 149


>gi|149185197|ref|ZP_01863514.1| CMP/dCMP deaminase, zinc-binding protein [Erythrobacter sp. SD-21]
 gi|148831308|gb|EDL49742.1| CMP/dCMP deaminase, zinc-binding protein [Erythrobacter sp. SD-21]
          Length = 142

 Score =  139 bits (350), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 65/128 (50%), Positives = 87/128 (67%)

Query: 22  NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81
            E+PVGAV   +  II+ A N  RE  D TAHAEILAIR     L QE L   +L+VTLE
Sbjct: 15  GEVPVGAVITRDGAIIAEAHNTPRETCDPTAHAEILAIRRAAEALGQERLTTCELWVTLE 74

Query: 82  PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141
           PC MCA AI  AR+ ++YYGAS+PKGG +E+G + +    C H PE+Y G+ E+R+ +++
Sbjct: 75  PCAMCAGAIVHARLAKVYYGASDPKGGAVEHGARVFEQEQCLHKPEVYAGLGEERAAEML 134

Query: 142 QDFFKERR 149
           +DFF+ RR
Sbjct: 135 RDFFRGRR 142


>gi|326385790|ref|ZP_08207419.1| tRNA-adenosine deaminase [Novosphingobium nitrogenifigens DSM
           19370]
 gi|326209769|gb|EGD60557.1| tRNA-adenosine deaminase [Novosphingobium nitrogenifigens DSM
           19370]
          Length = 142

 Score =  139 bits (350), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 67/142 (47%), Positives = 94/142 (66%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  A+ EA+NAA    +P+GAV +   ++I+ A N  R+  D TAHAEILAIR   + L 
Sbjct: 1   MRLAMVEARNAAQVGAVPIGAVVMRGGEVIATAHNGPRDCHDPTAHAEILAIRAAAKALG 60

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
            + L + DL+VTLEPC MCA AI+ ARI R+YY A +PKGG +E+G + +  +T  H PE
Sbjct: 61  ADRLDDCDLWVTLEPCAMCAGAIAHARIARVYYAAPDPKGGAVEHGPRLFEQSTVLHRPE 120

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
           IY G+ E  S +++++FF  RR
Sbjct: 121 IYSGLGELESARLLREFFAARR 142


>gi|67459711|ref|YP_247335.1| cytosine deaminase [Rickettsia felis URRWXCal2]
 gi|67005244|gb|AAY62170.1| Cytosine deaminase [Rickettsia felis URRWXCal2]
          Length = 159

 Score =  139 bits (350), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 68/148 (45%), Positives = 98/148 (66%), Gaps = 2/148 (1%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAIRM 61
            N FM  AL++A  A  +NE+PVGAV V  LN KII  + N   E  +   HAEI+AI  
Sbjct: 12  NNFFMEQALKQAGIAFDKNEVPVGAVIVDRLNQKIIVSSHNNTEEKNNALYHAEIIAINE 71

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
            C ++S + L + D+YVTLEPC MCAAAI+ +R++RL+YGAS+ K G +E+  +++  + 
Sbjct: 72  ACNLISSKNLNDYDIYVTLEPCAMCAAAIAHSRLKRLFYGASDSKHGAVESNLRYFNSSV 131

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
           C + PEIY GI  + SR ++++FFK  R
Sbjct: 132 CFYRPEIYSGILAEDSRLLMKEFFKRIR 159


>gi|292572491|gb|ADE30406.1| Cytosine deaminase [Rickettsia prowazekii Rp22]
          Length = 163

 Score =  139 bits (350), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 68/148 (45%), Positives = 99/148 (66%), Gaps = 2/148 (1%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAIRM 61
            N FM  AL++A+ A  +NE+PVG V V  LN KII  + N   E K+   HAEI+AI  
Sbjct: 12  NNFFMEQALKQARLAFDKNEVPVGVVIVCRLNQKIIVSSHNNIEEKKNPLCHAEIIAINT 71

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
            C ++S + L + D+YVTLEPC MCA+AIS +R++RL+YGAS+ K G +E+  +++   +
Sbjct: 72  ACNLISSKNLNDYDIYVTLEPCAMCASAISHSRLKRLFYGASDSKHGAVESNLRYFNSNS 131

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
           C + PEIY GI  + SR ++Q+FF+  R
Sbjct: 132 CFYRPEIYSGILSEHSRFLMQEFFQRIR 159


>gi|58698581|ref|ZP_00373480.1| cytidine and deoxycytidylate deaminase family protein [Wolbachia
           endosymbiont of Drosophila ananassae]
 gi|58534906|gb|EAL59006.1| cytidine and deoxycytidylate deaminase family protein [Wolbachia
           endosymbiont of Drosophila ananassae]
          Length = 148

 Score =  139 bits (349), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 72/143 (50%), Positives = 95/143 (66%), Gaps = 8/143 (5%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  A+E+A+ A   +E+P+GAV V  + IIS A N +    D TAHAE+LAIR   +  
Sbjct: 13  YMELAIEQAKLAQKNDEVPIGAVIVSGDNIISSAHNIS---SDPTAHAEMLAIR---QAF 66

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
           S   L + D+YVTLEPC MCA AIS ARI+RLY+GA NPKGGGIENG + +    C H P
Sbjct: 67  STSTLCDTDMYVTLEPCPMCAQAISFARIKRLYFGAYNPKGGGIENGAKIFQF--CSHIP 124

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+Y GI E     +++DFF++ R
Sbjct: 125 EVYGGILETECSFLLKDFFEKLR 147


>gi|190571610|ref|YP_001975968.1| cytidine and deoxycytidylate deaminase family protein [Wolbachia
           endosymbiont of Culex quinquefasciatus Pel]
 gi|190357882|emb|CAQ55341.1| cytidine and deoxycytidylate deaminase family protein [Wolbachia
           endosymbiont of Culex quinquefasciatus Pel]
          Length = 141

 Score =  139 bits (349), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 71/143 (49%), Positives = 97/143 (67%), Gaps = 8/143 (5%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M+ A+E+A+ A    E+P+GAV V  N IIS A N +    D TAHAE+L IR   +  
Sbjct: 6   YMALAIEQAKLAQKDGEVPIGAVIVNGNNIISSAHNISN---DPTAHAEMLTIR---QAF 59

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
           S   L E ++YVTLEPC MCA AIS A+I+RLY+GA NPKGGG+ENGT+ +    C+H P
Sbjct: 60  STSTLYEAEMYVTLEPCPMCAQAISFAKIKRLYFGAYNPKGGGVENGTRIFQF--CNHIP 117

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+Y GI E +   +++DFF++ R
Sbjct: 118 EVYGGILETKCSLLLKDFFEKLR 140


>gi|157964979|ref|YP_001499803.1| cytosine deaminase [Rickettsia massiliae MTU5]
 gi|157844755|gb|ABV85256.1| Cytosine deaminase [Rickettsia massiliae MTU5]
          Length = 190

 Score =  138 bits (348), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 67/148 (45%), Positives = 97/148 (65%), Gaps = 2/148 (1%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAIRM 61
            N FM  AL++A+ A  +NE+PVGAV V  LN KII+   N      +   HAEI+AI  
Sbjct: 14  NNFFMEQALKQAKIAFDKNEVPVGAVIVDRLNQKIIASTHNNTEAKNNALYHAEIIAINE 73

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
            C ++S + L + D+YVTLEPC MCAAAI+ +R++RL+YGAS+ K G +E+  +++  + 
Sbjct: 74  ACNLISSKNLNDYDIYVTLEPCAMCAAAIAHSRLKRLFYGASDSKHGAVESNLRYFNSSA 133

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
           C H PEIY GI  + S  ++++FFK  R
Sbjct: 134 CFHRPEIYSGILAEDSGLLMKEFFKRIR 161


>gi|254474984|ref|ZP_05088370.1| cytosine deaminase [Ruegeria sp. R11]
 gi|214029227|gb|EEB70062.1| cytosine deaminase [Ruegeria sp. R11]
          Length = 152

 Score =  138 bits (347), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 74/143 (51%), Positives = 99/143 (69%), Gaps = 1/143 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  AL EA+ AA R E+PVGA  +  +  ++++AGNR REL D TAHAE+L IR  C  +
Sbjct: 7   MDVALSEARAAAERGEVPVGAALIAPDGTVVAQAGNRTRELSDPTAHAEVLVIREACAAI 66

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
             E L   DLYVTLEPC MCAAAI+ ARIRR+YYGAS+PK GG+ +G   ++    HH+P
Sbjct: 67  GSERLNGYDLYVTLEPCAMCAAAIAAARIRRVYYGASDPKSGGVAHGACVFSHPQAHHAP 126

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+Y GIS   + ++++DFF  +R
Sbjct: 127 EVYEGISAAPAERLLRDFFAAKR 149


>gi|260432946|ref|ZP_05786917.1| tRNA-specific adenosine deaminase [Silicibacter lacuscaerulensis
           ITI-1157]
 gi|260416774|gb|EEX10033.1| tRNA-specific adenosine deaminase [Silicibacter lacuscaerulensis
           ITI-1157]
          Length = 156

 Score =  138 bits (347), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 75/143 (52%), Positives = 100/143 (69%), Gaps = 1/143 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  ALE+A+ A  R E+PVGAV V  + +II+  GNR REL D TAHAEILA+R  CR +
Sbjct: 7   MDKALEQARAAGDRGEVPVGAVIVSPDGRIIAADGNRTRELHDPTAHAEILALRAACRAV 66

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
             E L   DLYVTLEPC MCAAA++ ARIRR+YYGA++PK GG+ +G + ++    HH P
Sbjct: 67  GSERLTGHDLYVTLEPCAMCAAALAAARIRRIYYGAADPKSGGVAHGARVFSHPQAHHRP 126

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+Y GI+ +    +++DFF  +R
Sbjct: 127 EVYDGIAAEDCAWLLRDFFAAQR 149


>gi|225630106|ref|YP_002726897.1| cytidine and deoxycytidylate deaminase family protein [Wolbachia
           sp. wRi]
 gi|225592087|gb|ACN95106.1| cytidine and deoxycytidylate deaminase family protein [Wolbachia
           sp. wRi]
          Length = 135

 Score =  138 bits (347), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 72/142 (50%), Positives = 94/142 (66%), Gaps = 8/142 (5%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  A+E+A+ A   +E+P+GAV V  + IIS A N +    D TAHAE+LAIR   +  S
Sbjct: 1   MELAIEQAKLAQKNDEVPIGAVIVSGDNIISSAHNIS---SDPTAHAEMLAIR---QAFS 54

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
              L + D+YVTLEPC MCA AIS ARI+RLY+GA NPKGGGIENG + +    C H PE
Sbjct: 55  TSTLCDTDMYVTLEPCPMCAQAISFARIKRLYFGAYNPKGGGIENGAKIFQF--CSHIPE 112

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
           +Y GI E     +++DFF++ R
Sbjct: 113 VYGGILETECSFLLKDFFEKLR 134


>gi|15893208|ref|NP_360922.1| cytosine deaminase [Rickettsia conorii str. Malish 7]
 gi|15620423|gb|AAL03823.1| cytosine deaminase [Rickettsia conorii str. Malish 7]
          Length = 168

 Score =  137 bits (346), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 67/148 (45%), Positives = 98/148 (66%), Gaps = 2/148 (1%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAIRM 61
            N FM  AL++A+ A  +NE+PVGAV V  L+ KII+   N   E  +   HAEI+AI  
Sbjct: 12  NNFFMEQALKQAKIAFDKNEVPVGAVVVDRLHQKIIASTHNNTEEKNNALYHAEIIAINE 71

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
            C ++S + L + D+YVTLEPC MCAAAI+ +R++RL+YGAS+ K G +E+  +++  + 
Sbjct: 72  ACNLISSKNLNDYDIYVTLEPCAMCAAAIAHSRLKRLFYGASDSKHGVVESNLRYFNSSA 131

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
           C H PEIY GI  + S  ++++FFK  R
Sbjct: 132 CFHRPEIYSGILAEDSGLLMKEFFKRIR 159


>gi|213019012|ref|ZP_03334819.1| cytidine and deoxycytidylate deaminase family protein [Wolbachia
           endosymbiont of Culex quinquefasciatus JHB]
 gi|212995121|gb|EEB55762.1| cytidine and deoxycytidylate deaminase family protein [Wolbachia
           endosymbiont of Culex quinquefasciatus JHB]
          Length = 135

 Score =  137 bits (346), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 71/142 (50%), Positives = 96/142 (67%), Gaps = 8/142 (5%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M+ A+E+A+ A    E+P+GAV V  N IIS A N +    D TAHAE+L IR   +  S
Sbjct: 1   MALAIEQAKLAQKDGEVPIGAVIVNGNNIISSAHNISN---DPTAHAEMLTIR---QAFS 54

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
              L E ++YVTLEPC MCA AIS A+I+RLY+GA NPKGGG+ENGT+ +    C+H PE
Sbjct: 55  TSTLYEAEMYVTLEPCPMCAQAISFAKIKRLYFGAYNPKGGGVENGTRIFQF--CNHIPE 112

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
           +Y GI E +   +++DFF++ R
Sbjct: 113 VYGGILETKCSLLLKDFFEKLR 134


>gi|94498766|ref|ZP_01305314.1| CMP/dCMP deaminase, zinc-binding protein [Sphingomonas sp. SKA58]
 gi|94421775|gb|EAT06828.1| CMP/dCMP deaminase, zinc-binding protein [Sphingomonas sp. SKA58]
          Length = 152

 Score =  137 bits (346), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 70/142 (49%), Positives = 89/142 (62%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  ALE A+ A   NE+P+GAV   +  II    NRNR   D TAHAE++A+R     L 
Sbjct: 11  MRRALELARAAQAANEVPIGAVVTRDGVIIGEGENRNRRDCDPTAHAEMVAMRAAAVRLH 70

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
              L   DL+VTLEPC MCA AIS ARI RLYYGA++PKGG IE G + +    C H PE
Sbjct: 71  DFRLTGCDLWVTLEPCPMCAGAISHARIARLYYGAADPKGGAIEQGPRLFMQPQCLHRPE 130

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
           +Y G++E  +  +++DFF  RR
Sbjct: 131 VYAGLAEAEASALLRDFFAARR 152


>gi|152112361|sp|Q1RGK7|Y1426_RICBR RecName: Full=Uncharacterized deaminase RBE_1426
          Length = 145

 Score =  137 bits (346), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 68/144 (47%), Positives = 97/144 (67%), Gaps = 2/144 (1%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M  AL++A+ A  +NE+PVGAV V   N KIIS++ N   E  +   HAEI+AI   CRI
Sbjct: 1   MREALKQAEIAFSKNEVPVGAVIVDRENQKIISKSYNNTEEKNNALYHAEIIAINEACRI 60

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           +S + L + D+YVTLEPC MCAAAI+ +R++RL+YGAS+ K G +E+  +++    C H 
Sbjct: 61  ISSKNLSDYDIYVTLEPCAMCAAAIAHSRLKRLFYGASDSKHGAVESNLRYFNSKACFHR 120

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
           PEIY GI  + S  +++ FFK+ R
Sbjct: 121 PEIYSGIFAEDSALLMKGFFKKIR 144


>gi|85709873|ref|ZP_01040938.1| cytidine/deoxycytidylate deaminase, zinc-binding region
           [Erythrobacter sp. NAP1]
 gi|85688583|gb|EAQ28587.1| cytidine/deoxycytidylate deaminase, zinc-binding region
           [Erythrobacter sp. NAP1]
          Length = 149

 Score =  137 bits (345), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 70/143 (48%), Positives = 94/143 (65%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FMS AL  A+ A+   E+P+GAV V + KII+   N  R+  D TAHAEI+AIR     L
Sbjct: 7   FMSSALSLARAASELGEVPIGAVVVKDGKIIAEGHNETRDQNDPTAHAEIVAIRRAAAAL 66

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
             + L   DL+VTLEPC MCA AI+ ARI RLYY AS+PKGG +E+G + +    C H P
Sbjct: 67  GDDRLTGCDLWVTLEPCAMCAGAIAHARIARLYYAASDPKGGAVEHGARVFEQEQCLHRP 126

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+Y G+ E+ +  +++ FF+ERR
Sbjct: 127 EVYSGLGEEEAADMLRGFFRERR 149


>gi|157826299|ref|YP_001494019.1| cytosine deaminase [Rickettsia akari str. Hartford]
 gi|157800257|gb|ABV75511.1| cytosine deaminase [Rickettsia akari str. Hartford]
          Length = 159

 Score =  137 bits (345), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 67/151 (44%), Positives = 99/151 (65%), Gaps = 2/151 (1%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILA 58
           M   N FM  AL++A+ A  +NE+PVGAV V  LN KI+  + N   E  +   HAEI+A
Sbjct: 9   MSFNNFFMEQALKQARLAFDKNEVPVGAVMVERLNQKIVINSHNNTEEKNNALYHAEIIA 68

Query: 59  IRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
           I   C ++S + L + D+YVTLEPC MCAAAI+ +R++RL+YGAS+ K G +E+  +++ 
Sbjct: 69  INEVCNLISSKNLNDYDIYVTLEPCAMCAAAIAHSRLKRLFYGASDSKHGAVESNLRYFN 128

Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
            + C H PEIY GI  + S  ++++FF+  R
Sbjct: 129 SSACFHRPEIYSGILAEDSGLLMKEFFRRIR 159


>gi|42520340|ref|NP_966255.1| cytidine and deoxycytidylate deaminase family protein [Wolbachia
           endosymbiont of Drosophila melanogaster]
 gi|42410078|gb|AAS14189.1| cytidine and deoxycytidylate deaminase family protein [Wolbachia
           endosymbiont of Drosophila melanogaster]
          Length = 135

 Score =  136 bits (342), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 72/142 (50%), Positives = 94/142 (66%), Gaps = 8/142 (5%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  A+E+A+ A   +E+P+GAV V  + IIS A N +    D TAHAE+LAIR   +  S
Sbjct: 1   MELAIEQAKLAQKNDEVPIGAVIVSGDNIISSAHNIS---SDPTAHAEMLAIR---QAFS 54

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
              L + D+YVTLEPC MCA AIS ARI+RLY+GA NPKGGGIENG + +    C H PE
Sbjct: 55  TPTLCDADMYVTLEPCPMCAQAISFARIKRLYFGAYNPKGGGIENGAKIFQF--CSHIPE 112

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
           +Y GI E     +++DFF++ R
Sbjct: 113 VYGGILEIECSFLLKDFFEKLR 134


>gi|254454396|ref|ZP_05067833.1| cytosine deaminase [Octadecabacter antarcticus 238]
 gi|198268802|gb|EDY93072.1| cytosine deaminase [Octadecabacter antarcticus 238]
          Length = 145

 Score =  135 bits (341), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 70/130 (53%), Positives = 90/130 (69%), Gaps = 1/130 (0%)

Query: 21  RNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVT 79
           R E+PVGAV +     +I+ AGNR REL D TAHAEILAIR  C  L QE L   D+YVT
Sbjct: 14  RGEVPVGAVVIGPTGLVIATAGNRTRELNDPTAHAEILAIRAACAALGQERLTGHDIYVT 73

Query: 80  LEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139
           LEPC MCAAAI+ AR+ RLYYGAS+PK GG+    + ++   CHH+PE+Y G+S + S  
Sbjct: 74  LEPCPMCAAAIANARLARLYYGASDPKSGGVAQPPRVFSHPQCHHTPEVYDGLSAETSET 133

Query: 140 IIQDFFKERR 149
           +++ FF  +R
Sbjct: 134 LLKSFFAAKR 143


>gi|114765383|ref|ZP_01444498.1| cytidine and deoxycytidylate deaminase family protein [Pelagibaca
           bermudensis HTCC2601]
 gi|114542226|gb|EAU45256.1| cytidine and deoxycytidylate deaminase family protein [Roseovarius
           sp. HTCC2601]
          Length = 145

 Score =  135 bits (341), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 69/117 (58%), Positives = 84/117 (71%)

Query: 33  NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISL 92
           +  +++ AGNR REL D TAHAEILA+R  CR    E LP  DLYVTLEPC MCAAAIS 
Sbjct: 27  SGAVVACAGNRTRELDDPTAHAEILALRAACRAAGSERLPGHDLYVTLEPCPMCAAAISF 86

Query: 93  ARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
           ARI RLYYGA++PK GG+++G + Y  A CHH PE+Y GIS   S  +++ FF ERR
Sbjct: 87  ARIARLYYGAADPKSGGVDHGARVYAHAQCHHVPEVYDGISAAPSEALLKRFFAERR 143


>gi|51473999|ref|YP_067756.1| cytosine aminohydrolase [Rickettsia typhi str. Wilmington]
 gi|81610850|sp|Q68Y02|Y819_RICTY RecName: Full=Uncharacterized deaminase RT0819
 gi|51460311|gb|AAU04274.1| Cytosine aminohydrolase [Rickettsia typhi str. Wilmington]
          Length = 148

 Score =  135 bits (339), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 65/144 (45%), Positives = 97/144 (67%), Gaps = 2/144 (1%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M  AL++A+ A  +NE+PVG V V  LN KII  + N   E  +   HAEI+AI   C +
Sbjct: 1   MEQALKQARLAFDKNEVPVGVVIVYRLNQKIIVSSHNNIEEKNNALCHAEIIAINEACNL 60

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           +S + L + D+YVTLEPC MCA+AIS +R++RL+YGAS+ K G +E+  +++  + C H 
Sbjct: 61  ISSKNLNDYDIYVTLEPCAMCASAISHSRLKRLFYGASDSKQGAVESNLRYFNSSACFHR 120

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
           PEIY GI  + SR ++++FF++ R
Sbjct: 121 PEIYSGILSEHSRFLMKEFFQKMR 144


>gi|260574584|ref|ZP_05842587.1| CMP/dCMP deaminase zinc-binding [Rhodobacter sp. SW2]
 gi|259023001|gb|EEW26294.1| CMP/dCMP deaminase zinc-binding [Rhodobacter sp. SW2]
          Length = 161

 Score =  135 bits (339), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 75/132 (56%), Positives = 93/132 (70%), Gaps = 1/132 (0%)

Query: 19  ALRNEIPVGAVAVLNNKIISR-AGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLY 77
            LR E+PVGAV V  + ++   AGNR REL D TAHAE+LAIR  C     E L   DLY
Sbjct: 29  GLRGEVPVGAVVVSPSGVVVAVAGNRVRELCDPTAHAEVLAIRAACAAAGSERLVGHDLY 88

Query: 78  VTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRS 137
           VTLEPC MCAAAISLARI RLYYGA++PK GG+  GT+ ++   CHH PEIY GI  +++
Sbjct: 89  VTLEPCPMCAAAISLARIGRLYYGAADPKSGGVAQGTRVFSHPQCHHVPEIYDGIGAEQA 148

Query: 138 RQIIQDFFKERR 149
             +++DFF +RR
Sbjct: 149 ADLLRDFFADRR 160


>gi|218506804|ref|ZP_03504682.1| cytosine deaminase protein [Rhizobium etli Brasil 5]
          Length = 98

 Score =  134 bits (336), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 59/95 (62%), Positives = 73/95 (76%)

Query: 55  EILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           EI AIR+ C  L QE L   DLYVTLEPCTMCAAAIS ARIRRLYYGA +PKGG ++NG 
Sbjct: 1   EIAAIRLACEALGQERLAGADLYVTLEPCTMCAAAISFARIRRLYYGAEDPKGGAVDNGV 60

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
           +FY   TCHH PE+Y G++E +S +I++ FF ++R
Sbjct: 61  RFYAQPTCHHVPEVYSGLNEVQSAEILRTFFSQKR 95


>gi|15604662|ref|NP_221180.1| hypothetical protein RP831 [Rickettsia prowazekii str. Madrid E]
 gi|6226400|sp|Q9ZCC6|Y831_RICPR RecName: Full=Uncharacterized deaminase RP831
 gi|3861357|emb|CAA15256.1| unknown [Rickettsia prowazekii]
          Length = 148

 Score =  134 bits (336), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 66/144 (45%), Positives = 97/144 (67%), Gaps = 2/144 (1%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M  AL++A+ A  +NE+PVG V V  LN KII  + N   E K+   HAEI+AI   C +
Sbjct: 1   MEQALKQARLAFDKNEVPVGVVIVCRLNQKIIVSSHNNIEEKKNPLCHAEIIAINTACNL 60

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           +S + L + D+YVTLEPC MCA+AIS +R++RL+YGAS+ K G +E+  +++   +C + 
Sbjct: 61  ISSKNLNDYDIYVTLEPCAMCASAISHSRLKRLFYGASDSKHGAVESNLRYFNSNSCFYR 120

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
           PEIY GI  + SR ++Q+FF+  R
Sbjct: 121 PEIYSGILSEHSRFLMQEFFQRIR 144


>gi|152112359|sp|Q4UJW9|Y1319_RICFE RecName: Full=Uncharacterized deaminase RF_1319
          Length = 144

 Score =  134 bits (336), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 66/144 (45%), Positives = 96/144 (66%), Gaps = 2/144 (1%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M  AL++A  A  +NE+PVGAV V  LN KII  + N   E  +   HAEI+AI   C +
Sbjct: 1   MEQALKQAGIAFDKNEVPVGAVIVDRLNQKIIVSSHNNTEEKNNALYHAEIIAINEACNL 60

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           +S + L + D+YVTLEPC MCAAAI+ +R++RL+YGAS+ K G +E+  +++  + C + 
Sbjct: 61  ISSKNLNDYDIYVTLEPCAMCAAAIAHSRLKRLFYGASDSKHGAVESNLRYFNSSVCFYR 120

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
           PEIY GI  + SR ++++FFK  R
Sbjct: 121 PEIYSGILAEDSRLLMKEFFKRIR 144


>gi|294795071|ref|ZP_06760206.1| LOW QUALITY PROTEIN: cytidine/deoxycytidylate deaminase family
           protein [Veillonella sp. 3_1_44]
 gi|294454433|gb|EFG22807.1| LOW QUALITY PROTEIN: cytidine/deoxycytidylate deaminase family
           protein [Veillonella sp. 3_1_44]
          Length = 164

 Score =  133 bits (335), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 70/143 (48%), Positives = 87/143 (60%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  ALEEA  A    EIP+GA+ V NN IISR  NR     D TAHAE+L IR  C +L
Sbjct: 22  FMGFALEEAHKAYALGEIPIGAILVQNNTIISRHHNRRELDHDATAHAEVLVIREACDVL 81

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
            +  L    LYVT+EPC MCA AI  +RI R+ YGAS+ KGG +E+     +    +H P
Sbjct: 82  KRWRLTGCTLYVTIEPCPMCAGAIINSRIDRVVYGASDYKGGAVESLFNVLSHPGLNHEP 141

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+  G+      QI++DFFKERR
Sbjct: 142 ELASGVLGDECSQIMKDFFKERR 164


>gi|269797481|ref|YP_003311381.1| CMP/dCMP deaminase zinc-binding protein [Veillonella parvula DSM
           2008]
 gi|269094110|gb|ACZ24101.1| CMP/dCMP deaminase zinc-binding protein [Veillonella parvula DSM
           2008]
          Length = 169

 Score =  133 bits (335), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 70/147 (47%), Positives = 88/147 (59%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
           +   FM  ALEEA  A    EIP+GA+ V NN IISR  NR     D TAHAE+L IR  
Sbjct: 6   RDEYFMGFALEEAHKAYALGEIPIGAILVQNNTIISRHHNRRELDHDATAHAEVLVIREA 65

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
           C +L +  L    LYVT+EPC MCA AI  +RI R+ YGAS+ KGG +E+     +    
Sbjct: 66  CDVLKRWRLTGCTLYVTIEPCPMCAGAIINSRIDRVVYGASDYKGGAVESLFNVLSHPGL 125

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H PE+  G+      QI++DFFKERR
Sbjct: 126 NHEPELASGVLGDECSQIMKDFFKERR 152


>gi|126727514|ref|ZP_01743348.1| cytidine and deoxycytidylate deaminase family protein
           [Rhodobacterales bacterium HTCC2150]
 gi|126703294|gb|EBA02393.1| cytidine and deoxycytidylate deaminase family protein
           [Rhodobacterales bacterium HTCC2150]
          Length = 143

 Score =  133 bits (334), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 74/143 (51%), Positives = 96/143 (67%), Gaps = 1/143 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  AL+EA+ A  R E+PVGAV +  + ++I++AGN  R   D  AHAEILAIR  C  L
Sbjct: 1   MDIALDEARAAGQRGEVPVGAVILSRDGQVIAQAGNETRAQNDPIAHAEILAIRAACSAL 60

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
            +E L   DLYVTLEPC MCAAAI+ ARI R+YYGAS+PK GG+  G + +  A  HH P
Sbjct: 61  GRERLQGFDLYVTLEPCAMCAAAIAAARIGRVYYGASDPKSGGVAQGARVFDHAQSHHKP 120

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+Y GIS +    +++DFF  +R
Sbjct: 121 EVYDGISAKECENLLKDFFAAKR 143


>gi|282849118|ref|ZP_06258503.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Veillonella parvula ATCC 17745]
 gi|282580822|gb|EFB86220.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Veillonella parvula ATCC 17745]
          Length = 181

 Score =  133 bits (334), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 70/143 (48%), Positives = 87/143 (60%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  ALEEA  A    EIP+GA+ V NN IISR  NR     D TAHAE+L IR  C +L
Sbjct: 22  FMGFALEEAHKAYALGEIPIGAILVQNNTIISRHHNRRELDHDATAHAEVLVIREACDVL 81

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
            +  L    LYVT+EPC MCA AI  +RI R+ YGAS+ KGG +E+     +    +H P
Sbjct: 82  KRWRLTGCTLYVTIEPCPMCAGAIINSRIDRVVYGASDYKGGAVESLFNVLSHPGLNHEP 141

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+  G+      QI++DFFKERR
Sbjct: 142 ELASGVLGDECSQIMKDFFKERR 164


>gi|294792948|ref|ZP_06758094.1| LOW QUALITY PROTEIN: cytidine/deoxycytidylate deaminase family
           protein [Veillonella sp. 6_1_27]
 gi|294455893|gb|EFG24257.1| LOW QUALITY PROTEIN: cytidine/deoxycytidylate deaminase family
           protein [Veillonella sp. 6_1_27]
          Length = 164

 Score =  132 bits (333), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 70/143 (48%), Positives = 88/143 (61%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM+ ALEEA  A    EIP+GA+ V NN IISR  NR     D TAHAE+L IR  C +L
Sbjct: 22  FMAFALEEAHKAYDLGEIPIGAILVQNNTIISRHHNRRELDHDATAHAEVLVIREACGVL 81

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
            +  L    LYVT+EPC MCA AI  +RI R+ YGAS+ KGG +E+     +    +H P
Sbjct: 82  KRWRLTGCTLYVTIEPCPMCAGAIINSRIDRVVYGASDYKGGAVESLFNVLSHPGLNHEP 141

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+  G+      QI++DFFKERR
Sbjct: 142 ELASGVLGDECSQIMKDFFKERR 164


>gi|152112358|sp|Q92G39|Y1285_RICCN RecName: Full=Uncharacterized deaminase RC1285
          Length = 153

 Score =  132 bits (332), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 65/144 (45%), Positives = 96/144 (66%), Gaps = 2/144 (1%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M  AL++A+ A  +NE+PVGAV V  L+ KII+   N   E  +   HAEI+AI   C +
Sbjct: 1   MEQALKQAKIAFDKNEVPVGAVVVDRLHQKIIASTHNNTEEKNNALYHAEIIAINEACNL 60

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           +S + L + D+YVTLEPC MCAAAI+ +R++RL+YGAS+ K G +E+  +++  + C H 
Sbjct: 61  ISSKNLNDYDIYVTLEPCAMCAAAIAHSRLKRLFYGASDSKHGVVESNLRYFNSSACFHR 120

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
           PEIY GI  + S  ++++FFK  R
Sbjct: 121 PEIYSGILAEDSGLLMKEFFKRIR 144


>gi|239948393|ref|ZP_04700146.1| cytosine/adenosine deaminase [Rickettsia endosymbiont of Ixodes
           scapularis]
 gi|239922669|gb|EER22693.1| cytosine/adenosine deaminase [Rickettsia endosymbiont of Ixodes
           scapularis]
          Length = 159

 Score =  132 bits (332), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 65/148 (43%), Positives = 95/148 (64%), Gaps = 2/148 (1%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAIRM 61
            N FM  AL++A+ A  +NE+PVGAV V  LN KII+   N   E  +   HAEI+AI  
Sbjct: 12  NNFFMEQALKQARIAFDKNEVPVGAVIVDRLNQKIIASTHNNTEEKNNALCHAEIIAINE 71

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
            C ++  + L + D+YVTLE C MCAAAI+ +R++RL+YGA + K G +E+  +++  + 
Sbjct: 72  ACNLIYSKNLNDYDIYVTLESCAMCAAAIAHSRLKRLFYGAFDSKHGAVESNLRYFNSSA 131

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
           C H PEIY GI  + S  ++++FFK  R
Sbjct: 132 CFHRPEIYSGILAEDSGLLMKEFFKRIR 159


>gi|241563436|ref|XP_002401703.1| conserved hypothetical protein [Ixodes scapularis]
 gi|215501895|gb|EEC11389.1| conserved hypothetical protein [Ixodes scapularis]
          Length = 159

 Score =  132 bits (332), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 65/148 (43%), Positives = 95/148 (64%), Gaps = 2/148 (1%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAIRM 61
            N FM  AL++A+ A  +NE+PVGAV V  LN KII+   N   E  +   HAEI+AI  
Sbjct: 12  NNFFMEQALKQARIAFDKNEVPVGAVIVDRLNQKIIASTHNNTEEKNNALCHAEIIAINE 71

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
            C ++  + L + D+YVTLE C MCAAAI+ +R++RL+YGA + K G +E+  +++  + 
Sbjct: 72  ACNLIYSKNLNDYDIYVTLESCAMCAAAIAHSRLKRLFYGAFDSKHGAVESNLRYFNSSA 131

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
           C H PEIY GI  + S  ++++FFK  R
Sbjct: 132 CFHRPEIYSGILAEDSGLLMKEFFKRIR 159


>gi|296282925|ref|ZP_06860923.1| tRNA-adenosine deaminase [Citromicrobium bathyomarinum JL354]
          Length = 152

 Score =  132 bits (332), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 64/128 (50%), Positives = 90/128 (70%)

Query: 22  NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81
            E+PVGAV + + ++I++A N  R L D TAHAE+LA+R   + L QE L   DL+VTLE
Sbjct: 24  GEVPVGAVVMRHGEVIAQAHNAPRTLADPTAHAEVLALRAAAKALGQERLEGCDLWVTLE 83

Query: 82  PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141
           PC MCA AI+ ARI RLYYGA++PKGG + +G + +    CHH PE+Y G+ E+ + +++
Sbjct: 84  PCAMCAGAIAHARIGRLYYGAADPKGGAVAHGARVFDHPQCHHRPEVYSGMGEEEAAKML 143

Query: 142 QDFFKERR 149
           + FF ERR
Sbjct: 144 RGFFNERR 151


>gi|323135792|ref|ZP_08070875.1| CMP/dCMP deaminase, zinc-binding [Methylocystis sp. ATCC 49242]
 gi|322398883|gb|EFY01402.1| CMP/dCMP deaminase, zinc-binding [Methylocystis sp. ATCC 49242]
          Length = 148

 Score =  132 bits (331), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 57/108 (52%), Positives = 77/108 (71%)

Query: 42  NRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
           NR    +D TAHAE+L IR     +  E L + DLYVTLEPC MCA AIS ARIRRLY+ 
Sbjct: 41  NRTLRDRDPTAHAEMLVIRQAAAAIGSERLVDCDLYVTLEPCAMCAGAISFARIRRLYFA 100

Query: 102 ASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
           A +PKGG +++G +F++  TCHH+P++Y GI E  + Q+++DFF+ RR
Sbjct: 101 AEDPKGGAVDHGPRFFSQPTCHHAPDVYGGIRESEAAQLLRDFFRARR 148


>gi|85375364|ref|YP_459426.1| nitrogen fixation protein [Erythrobacter litoralis HTCC2594]
 gi|84788447|gb|ABC64629.1| nitrogen fixation protein [Erythrobacter litoralis HTCC2594]
          Length = 142

 Score =  132 bits (331), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 74/142 (52%), Positives = 94/142 (66%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  ALEEA+ AA   E+P+GAV V   K+I  A N  R   D TAHAEI AIR   + L 
Sbjct: 1   MRLALEEARKAADAGEVPIGAVVVKGEKVIVAAHNSPRTDHDPTAHAEIAAIRAAAKALG 60

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
           QE L   DL+VTLEPC MCA AIS ARI RLYY AS+PKGG +E+G + +  + C H+PE
Sbjct: 61  QERLEGCDLWVTLEPCAMCAGAISHARIARLYYAASDPKGGAVEHGAKVFDHSQCLHAPE 120

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
           +Y G+ E  +  +++ FF+ERR
Sbjct: 121 VYSGMGEDEAADMLRGFFRERR 142


>gi|163737476|ref|ZP_02144893.1| CMP/dCMP deaminase, zinc-binding protein [Phaeobacter gallaeciensis
           BS107]
 gi|161389002|gb|EDQ13354.1| CMP/dCMP deaminase, zinc-binding protein [Phaeobacter gallaeciensis
           BS107]
          Length = 147

 Score =  131 bits (330), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 77/143 (53%), Positives = 99/143 (69%), Gaps = 1/143 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  AL EA+ AA R E+PVGAV +  + +I +RAGNR REL D TAHAE+L IR  C + 
Sbjct: 1   MDIALTEARAAAARGEVPVGAVLIAPDGQIAARAGNRTRELSDPTAHAEVLVIREACAVA 60

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
             E L   DLYVTLEPC MCAAAI+ ARIRR+YYGAS+PK GG+ +G   ++    HH+P
Sbjct: 61  GSERLNGHDLYVTLEPCAMCAAAIAAARIRRVYYGASDPKSGGVAHGACVFSHPQAHHAP 120

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+Y GIS + +  +++ FF  RR
Sbjct: 121 EVYEGISAEPAETLLKAFFAARR 143


>gi|317503805|ref|ZP_07961817.1| cytosine deaminase [Prevotella salivae DSM 15606]
 gi|315665102|gb|EFV04757.1| cytosine deaminase [Prevotella salivae DSM 15606]
          Length = 148

 Score =  130 bits (328), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 71/147 (48%), Positives = 89/147 (60%), Gaps = 5/147 (3%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
           K   FM  AL EAQ AA   EIP+GAV V N++IISRA N   +L DVTAHAE+ AI   
Sbjct: 7   KDEQFMRKALYEAQRAAEEGEIPIGAVIVCNDRIISRAHNLTEKLHDVTAHAEMQAITAA 66

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
             +L  + L +  LYVT+EPC MCA AI  A+I R+ YGAS+ K      G QFY     
Sbjct: 67  ADLLGGKYLSDCTLYVTVEPCVMCAGAIGWAQIGRIVYGASDEK-----RGYQFYAPRAL 121

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           H    +  G+ E   RQ++QDFFK++R
Sbjct: 122 HPKAVVTRGVLEAECRQMMQDFFKQKR 148


>gi|309775004|ref|ZP_07670019.1| cytidine/deoxycytidylate deaminase family protein
           [Erysipelotrichaceae bacterium 3_1_53]
 gi|308917222|gb|EFP62947.1| cytidine/deoxycytidylate deaminase family protein
           [Erysipelotrichaceae bacterium 3_1_53]
          Length = 162

 Score =  130 bits (327), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 60/143 (41%), Positives = 92/143 (64%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  A++EA  A +++E+P+G V V ++KII+R  N     +    HAEI+AI+  C+ +
Sbjct: 16  YMRAAIKEAVKANMKDEVPIGCVIVKDDKIIARGHNLRESKQQSINHAEIIAIQKACKKI 75

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L + DLYVTLEPC MCA AI  +RIR + YGAS+PKGG I++    Y     +H P
Sbjct: 76  GSWRLEDCDLYVTLEPCCMCAGAILQSRIRTVIYGASDPKGGSIDSTMHMYEQPGFNHYP 135

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
            +Y G+ ++   Q++++FFKE+R
Sbjct: 136 CVYSGVLQEECSQLLKNFFKEKR 158


>gi|126732068|ref|ZP_01747870.1| cytidine and deoxycytidylate deaminase family protein [Sagittula
           stellata E-37]
 gi|126707357|gb|EBA06421.1| cytidine and deoxycytidylate deaminase family protein [Sagittula
           stellata E-37]
          Length = 149

 Score =  130 bits (326), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 61/117 (52%), Positives = 82/117 (70%)

Query: 33  NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISL 92
           +  +++RAGNR REL D TAHAE+LA+R  C     + LP  DLYVTLEPC MCAAAIS 
Sbjct: 33  SGAVVARAGNRTRELSDPTAHAEMLALRAACAAAGSDRLPGHDLYVTLEPCPMCAAAISF 92

Query: 93  ARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
           AR+ R+YYGA++PK GG+  G + ++   CHH PE+Y GI  + +  ++  FF+ERR
Sbjct: 93  ARVARVYYGAADPKSGGVAQGPRVFSHPQCHHVPEVYDGIGAEAASALLTGFFRERR 149


>gi|99081767|ref|YP_613921.1| CMP/dCMP deaminase, zinc-binding [Ruegeria sp. TM1040]
 gi|99038047|gb|ABF64659.1| CMP/dCMP deaminase zinc-binding [Ruegeria sp. TM1040]
          Length = 144

 Score =  129 bits (325), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 71/129 (55%), Positives = 88/129 (68%), Gaps = 1/129 (0%)

Query: 22  NEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80
            E+PVGAV V    K+++RAGNR REL D TAHAE+LAIR  C  L  E L   DLYVTL
Sbjct: 15  GEVPVGAVLVSPEGKVVARAGNRTRELNDPTAHAEVLAIRAACAALGSERLLGHDLYVTL 74

Query: 81  EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140
           EPC MCAAAI+ ARI R+YYGAS+PK GG+ +G   +     HH+PE+Y G S  +S  +
Sbjct: 75  EPCAMCAAAIAAARIARVYYGASDPKSGGVAHGACVFDHPQSHHAPEVYEGFSAAQSEAL 134

Query: 141 IQDFFKERR 149
           ++ FF  RR
Sbjct: 135 LRAFFALRR 143


>gi|167648591|ref|YP_001686254.1| CMP/dCMP deaminase zinc-binding [Caulobacter sp. K31]
 gi|167351021|gb|ABZ73756.1| CMP/dCMP deaminase zinc-binding [Caulobacter sp. K31]
          Length = 146

 Score =  129 bits (323), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 67/144 (46%), Positives = 91/144 (63%), Gaps = 2/144 (1%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M+ AL+EA+ AA   E PVGAV +   + +I++RAGN      D TAHAEI AIR+    
Sbjct: 1   MAVALDEARAAAQAGETPVGAVILDPASGEILARAGNGPIGAHDPTAHAEISAIRLAAAK 60

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           L    L ++ L VTLEPC MCA AIS ARI R+ +GA +PKGG + +G +F+   TCH  
Sbjct: 61  LGNYRLTDLTLVVTLEPCAMCAGAISHARIGRVVFGAEDPKGGAVVHGPRFFAQPTCHWR 120

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
           PE+  G+  Q S  +++ FF+ RR
Sbjct: 121 PEVTGGVMAQESADLLRGFFRARR 144


>gi|284049062|ref|YP_003399401.1| CMP/dCMP deaminase zinc-binding protein [Acidaminococcus fermentans
           DSM 20731]
 gi|283953283|gb|ADB48086.1| CMP/dCMP deaminase zinc-binding protein [Acidaminococcus fermentans
           DSM 20731]
          Length = 159

 Score =  127 bits (320), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 69/145 (47%), Positives = 90/145 (62%), Gaps = 4/145 (2%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  ALEEA+ AA   EIPVGAV V + ++++R  NR  + +D TAHAE L IR  CR+L
Sbjct: 17  FMEMALEEARQAAREGEIPVGAVLVRDGQVLARDHNRREQDRDATAHAEFLVIRQACRLL 76

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA--TCHH 124
            +  L +  LYVTLEPC MCA AI  AR+ RL YGA +   G    G+QF   A  + + 
Sbjct: 77  RRWRLSDTTLYVTLEPCPMCAGAIWNARVGRLVYGAWDSAAGSC--GSQFNLPAHPSLNF 134

Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149
             E+  G+ E+  R+I+QDF K RR
Sbjct: 135 RTEVTAGVLEEECRKILQDFLKARR 159


>gi|317051389|ref|YP_004112505.1| CMP/dCMP deaminase zinc-binding protein [Desulfurispirillum indicum
           S5]
 gi|316946473|gb|ADU65949.1| CMP/dCMP deaminase zinc-binding protein [Desulfurispirillum indicum
           S5]
          Length = 167

 Score =  127 bits (319), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 73/145 (50%), Positives = 93/145 (64%), Gaps = 5/145 (3%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM+ ALEEA+ AA R E+PVGAV V + +II+RAGNR  E +D TAHAE+LAIR      
Sbjct: 13  FMAVALEEARQAAQRGEVPVGAVIVRHGEIIARAGNRKEEHRDPTAHAEVLAIREAAAAC 72

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT--CHH 124
           +   L +V+LYVTLEPC MC  AI  ARI R+YY  S+ K GGI   + F   A    +H
Sbjct: 73  ANWRLEDVELYVTLEPCVMCCGAIIAARIPRVYYACSDEKYGGI---SLFAMTADQRLNH 129

Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149
             +   G+ EQR RQ+++ FF  RR
Sbjct: 130 QVDARRGLLEQRCRQLLEAFFSTRR 154


>gi|259415788|ref|ZP_05739708.1| cytidine and deoxycytidylate deaminase family protein [Silicibacter
           sp. TrichCH4B]
 gi|259347227|gb|EEW59004.1| cytidine and deoxycytidylate deaminase family protein [Silicibacter
           sp. TrichCH4B]
          Length = 150

 Score =  127 bits (318), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 81/144 (56%), Positives = 103/144 (71%), Gaps = 1/144 (0%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           FM+ ALEEAQ AA R E+PVGAV V  + ++++RAGNR REL D TAHAE+L IR GC +
Sbjct: 6   FMAEALEEAQAAAARGEVPVGAVLVNPSGEVVARAGNRTRELNDPTAHAEVLVIRAGCAV 65

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           L  E L   DLYVTLEPC MCAAAI+ AR+ R+YYGAS+PK GG+ +G   +     HH 
Sbjct: 66  LGSERLTGHDLYVTLEPCAMCAAAIAAARVARVYYGASDPKSGGVAHGACVFDHPQAHHV 125

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
           PE+Y G S  +S  +++DFF +RR
Sbjct: 126 PEVYDGFSASQSEALLKDFFAKRR 149


>gi|254466312|ref|ZP_05079723.1| cytosine deaminase [Rhodobacterales bacterium Y4I]
 gi|206687220|gb|EDZ47702.1| cytosine deaminase [Rhodobacterales bacterium Y4I]
          Length = 156

 Score =  126 bits (316), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 74/143 (51%), Positives = 98/143 (68%), Gaps = 1/143 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  ALE+A+ AA R E+PVGA  +  + ++ + AGNR REL D TAHAEIL IR  C  L
Sbjct: 7   MDKALEQARAAAARGEVPVGAALIAPDGQVAALAGNRTRELNDPTAHAEILTIREACARL 66

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
             E L   DLYVTLEPC MCAAAI+ ARIRR+YYGA++PK GG+ +G   ++    HH P
Sbjct: 67  GSERLTGYDLYVTLEPCAMCAAAIAAARIRRVYYGAADPKSGGVAHGACVFSHPQAHHVP 126

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+Y GI+E  +  ++++FF  +R
Sbjct: 127 EVYDGIAEGEASALLKEFFAGKR 149


>gi|296533928|ref|ZP_06896452.1| cytosine deaminase [Roseomonas cervicalis ATCC 49957]
 gi|296265745|gb|EFH11846.1| cytosine deaminase [Roseomonas cervicalis ATCC 49957]
          Length = 147

 Score =  125 bits (314), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 65/140 (46%), Positives = 90/140 (64%), Gaps = 1/140 (0%)

Query: 11  ALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQE 69
           AL+EA++AA R E+PVGAV      +++ RAGNR  +  D +AHAE+LA+R     L   
Sbjct: 7   ALQEARDAAARGEVPVGAVVTDAAGRVLGRAGNRVEQDHDASAHAEMLALRQAAAALGSP 66

Query: 70  ILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIY 129
            LP   L VTLEPC MCA A S  RIRR+ +GA +PKGGG+E+G + Y   +CHH+PE+ 
Sbjct: 67  RLPGCTLTVTLEPCPMCAQAASFFRIRRVVFGAYDPKGGGVEHGARIYAAPSCHHAPEVV 126

Query: 130 PGISEQRSRQIIQDFFKERR 149
            G+ E     ++++FF   R
Sbjct: 127 GGVREGECATLLREFFAALR 146


>gi|206889673|ref|YP_002249189.1| cytosine deaminase [Thermodesulfovibrio yellowstonii DSM 11347]
 gi|206741611|gb|ACI20668.1| cytosine deaminase [Thermodesulfovibrio yellowstonii DSM 11347]
          Length = 154

 Score =  125 bits (313), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 69/143 (48%), Positives = 88/143 (61%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  AL+EA+ A  + EIPVGA+ V+N +IIS+A N      D TAHAEILAIR   RIL
Sbjct: 10  FMKEALKEAEKAYEKGEIPVGALIVVNGEIISKAHNIKETTFDPTAHAEILAIREAARIL 69

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  LYVT EPC MC+ AI  +RI+RL YG ++PKGG + +          +H  
Sbjct: 70  GAWRLTDATLYVTKEPCIMCSGAIVNSRIKRLVYGCNDPKGGAVVSLYNILNDKRLNHQV 129

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           EI  GI E+  R I++ FFKE R
Sbjct: 130 EITNGILEEECRVILKRFFKELR 152


>gi|83588899|ref|YP_428908.1| tRNA-adenosine deaminase [Moorella thermoacetica ATCC 39073]
 gi|83571813|gb|ABC18365.1| tRNA-adenosine deaminase [Moorella thermoacetica ATCC 39073]
          Length = 150

 Score =  125 bits (313), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 64/145 (44%), Positives = 88/145 (60%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           + +M  AL+EA+ A    E+P+GAV V   +II+RAGNR   L D TAHAEI+A+R   R
Sbjct: 4   HFYMGEALDEARKAFDLGEVPIGAVIVAGGEIIARAGNRRETLADPTAHAEIIALRAAAR 63

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
           +     L    LYVTLEPC MCA A+  ARIR+L YGA + + G +++           H
Sbjct: 64  VRGDWRLTGATLYVTLEPCPMCAGALVQARIRQLVYGAPDLRSGAVDSVVNLVENPHFDH 123

Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149
             E+ PGI E+  R++I+ FF+ RR
Sbjct: 124 QVEVIPGIREEECRELIKKFFQMRR 148


>gi|328956593|ref|YP_004373979.1| tRNA specific adenosine deaminase [Carnobacterium sp. 17-4]
 gi|328672917|gb|AEB28963.1| tRNA specific adenosine deaminase [Carnobacterium sp. 17-4]
          Length = 174

 Score =  125 bits (313), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 63/143 (44%), Positives = 85/143 (59%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  A++EA  A  + E+P+GA+ VLN KII R  NR  E  D T HAE+LAI+   R L
Sbjct: 10  FMQEAIKEAHKAEEKLEVPIGAIVVLNGKIIGRGHNRREESNDATTHAEMLAIQEANRYL 69

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L E  L+VTLEPC MC+ A+ L+R++ LYYGAS+PKGG         T    +H  
Sbjct: 70  GNWRLEEAQLFVTLEPCPMCSGAMILSRVKELYYGASDPKGGTAGTLMNLLTDERFNHQV 129

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           +I   + EQ   +++  FF+E R
Sbjct: 130 QIESSLLEQECGELLSTFFRELR 152


>gi|83952775|ref|ZP_00961505.1| cytidine and deoxycytidylate deaminase family protein [Roseovarius
           nubinhibens ISM]
 gi|83835910|gb|EAP75209.1| cytidine and deoxycytidylate deaminase family protein [Roseovarius
           nubinhibens ISM]
          Length = 151

 Score =  125 bits (313), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 76/143 (53%), Positives = 95/143 (66%), Gaps = 1/143 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  AL+EA+ AA R E+PVGAV V  +  +I+  GNR R   D TAHAE+L IR GC +L
Sbjct: 1   MDRALDEARAAAARGEVPVGAVLVGPDGAVIAADGNRTRAGHDPTAHAEMLVIRAGCAVL 60

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
             E L   DLYVTLEPC MCAAAIS AR+ R+YYGA +PK GG+ +G + ++   CHH P
Sbjct: 61  GVERLTGCDLYVTLEPCAMCAAAISAARVARVYYGAGDPKSGGVAHGARVFSHPQCHHVP 120

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           EIY GI    S  +++ FF  RR
Sbjct: 121 EIYDGIGGAESEALLRAFFAARR 143


>gi|218289065|ref|ZP_03493302.1| CMP/dCMP deaminase zinc-binding [Alicyclobacillus acidocaldarius
           LAA1]
 gi|218240890|gb|EED08068.1| CMP/dCMP deaminase zinc-binding [Alicyclobacillus acidocaldarius
           LAA1]
          Length = 156

 Score =  124 bits (312), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 64/143 (44%), Positives = 86/143 (60%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  ALE A+ AA   E+PVGAV V N +I+    NR    +D TAHAE+LAI    R L
Sbjct: 10  FMRRALELAEEAARWGEVPVGAVVVENGRIVGEGFNRRETWRDGTAHAEMLAIEEASRRL 69

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L    LYVTLEPC MCA AI L+R++RL YGA++ KGG + +  +       +H+P
Sbjct: 70  GGWRLTNCVLYVTLEPCPMCAGAIVLSRVQRLVYGATDAKGGAVASKVRLLEPGLWNHAP 129

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           +I  GI      +++ DFF++RR
Sbjct: 130 QITSGILADDCAKLLTDFFRKRR 152


>gi|223939608|ref|ZP_03631483.1| CMP/dCMP deaminase zinc-binding [bacterium Ellin514]
 gi|223891766|gb|EEF58252.1| CMP/dCMP deaminase zinc-binding [bacterium Ellin514]
          Length = 168

 Score =  124 bits (312), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 66/149 (44%), Positives = 85/149 (57%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           ++  N FM  AL +A  A  R E+P+GAV V   +II+RA N+   LKD TAHAE+LAI 
Sbjct: 9   LQSDNYFMGEALRQAVKAYDREEVPIGAVIVREGRIIARAFNQVETLKDATAHAEMLAIT 68

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
                +    L E  LYVT EPC MCA AI   R+ R+ +G S+PKGGG           
Sbjct: 69  QAEAAVGDWRLNECTLYVTKEPCPMCAGAIVHVRLSRVVFGLSDPKGGGAGGAMNLLQFP 128

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
           T +H  EI  G+ EQ  R ++Q FF E+R
Sbjct: 129 TLNHRAEITHGVREQECRSLLQQFFSEQR 157


>gi|189184848|ref|YP_001938633.1| cytosine deaminase [Orientia tsutsugamushi str. Ikeda]
 gi|189181619|dbj|BAG41399.1| cytosine deaminase [Orientia tsutsugamushi str. Ikeda]
          Length = 155

 Score =  124 bits (311), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 64/146 (43%), Positives = 91/146 (62%), Gaps = 2/146 (1%)

Query: 6   VFMSCALEEAQNAALRNEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
           +FM  A+E+A  A    E+PVG V V      I++RA N+     + T HAEI+AI   C
Sbjct: 1   MFMLQAIEQASQAFNLGEVPVGVVMVNRATRTILTRAYNKVETTLNPTFHAEIIAINKAC 60

Query: 64  RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123
            +LS + L   D+YV+LEPC MCAAA+S  RI R+++GA + K G IENG + +   T +
Sbjct: 61  SLLSCKYLHGYDIYVSLEPCAMCAAALSHVRIDRIFFGAYDEKFGAIENGVRLFYNTTVY 120

Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149
           + PEIY GI E +S++++Q FF   R
Sbjct: 121 YKPEIYGGIMELQSKELLQKFFSNLR 146


>gi|303243154|ref|ZP_07329591.1| CMP/dCMP deaminase zinc-binding [Acetivibrio cellulolyticus CD2]
 gi|302589304|gb|EFL59115.1| CMP/dCMP deaminase zinc-binding [Acetivibrio cellulolyticus CD2]
          Length = 154

 Score =  124 bits (311), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 64/149 (42%), Positives = 89/149 (59%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M++G +FM  AL+EA+ A  ++E PVGAV V +  IISR  N      D T HAEI AI+
Sbjct: 1   MEQGYLFMKEALKEAKKAYKKDETPVGAVIVKDGVIISRGHNEKEMKNDPTLHAEISAIK 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
             C+ L+   L + DLYVTLEPC MCA AI  AR+ RL+ G  +PK G + +      + 
Sbjct: 61  KACKKLNTWRLNDCDLYVTLEPCAMCAGAIIQARVGRLFIGTPDPKAGAVGSVVDILGVE 120

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  E++ G+  +    I++DFFKE R
Sbjct: 121 KFNHKVEVFYGLLMEECSMILKDFFKELR 149


>gi|148284933|ref|YP_001249023.1| cytosine deaminase [Orientia tsutsugamushi str. Boryong]
 gi|146740372|emb|CAM80811.1| cytosine deaminase [Orientia tsutsugamushi str. Boryong]
          Length = 155

 Score =  124 bits (311), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 63/146 (43%), Positives = 91/146 (62%), Gaps = 2/146 (1%)

Query: 6   VFMSCALEEAQNAALRNEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
           +FM  A+E+A  A    E+PVG V V      +++RA N+     + T HAEI+AI   C
Sbjct: 1   MFMLQAIEQASQAFNLGEVPVGVVIVNRATKTVLTRAYNKVETTLNPTFHAEIIAINKAC 60

Query: 64  RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123
            +LS + L   D+YV+LEPC MCAAA+S  RI R+++GA + K G IENG + +   T +
Sbjct: 61  SLLSCKYLHGYDIYVSLEPCAMCAAALSHVRIDRIFFGAYDEKFGAIENGVRLFYNTTVY 120

Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149
           + PEIY GI E +S++++Q FF   R
Sbjct: 121 YKPEIYGGIMELQSKELLQKFFSNLR 146


>gi|94969013|ref|YP_591061.1| tRNA-adenosine deaminase [Candidatus Koribacter versatilis
           Ellin345]
 gi|94551063|gb|ABF40987.1| tRNA-adenosine deaminase [Candidatus Koribacter versatilis
           Ellin345]
          Length = 152

 Score =  124 bits (311), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 65/144 (45%), Positives = 87/144 (60%)

Query: 6   VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           +FM  AL EA  A    E+P+GAV V  +KII R  NR     D TAHAEI+AIR   R 
Sbjct: 5   LFMEEALREAARAQASGEVPIGAVVVYQDKIIGRGWNRPAFECDPTAHAEIIAIREAGRE 64

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           L    L + +L+VTLEPC MCA AI+ ARIRRL Y A +PK G +++  Q       +H 
Sbjct: 65  LGNYRLTDCELFVTLEPCAMCAGAITHARIRRLIYAADDPKAGAVKSALQVLNHPALNHQ 124

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
            EI  G+   R+ +++Q FF+++R
Sbjct: 125 VEITSGVLAGRAMEMLQAFFRDKR 148


>gi|94501251|ref|ZP_01307773.1| cytidine/deoxycytidylate deaminase family protein [Oceanobacter sp.
           RED65]
 gi|94426678|gb|EAT11664.1| cytidine/deoxycytidylate deaminase family protein [Oceanobacter sp.
           RED65]
          Length = 164

 Score =  124 bits (311), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 64/143 (44%), Positives = 89/143 (62%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM+ A+++A+ A   NE+PVGAV VL+ ++I    N+     D TAHAE++A+R   + +
Sbjct: 10  FMALAIQQAKKADALNEVPVGAVVVLDGEVIGEGYNQPISGCDPTAHAEVMALRQAAKNV 69

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
           S   L   DLYVT+EPCTMCA AI  +RIRRL YGA+ PK G IE+     T +  +H  
Sbjct: 70  SNYRLVNADLYVTIEPCTMCAGAIVHSRIRRLVYGATEPKAGVIESQQTILTQSYFNHRV 129

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+  GI   +   I+Q FF+ RR
Sbjct: 130 EVVSGILLDQCTDIVQAFFRRRR 152


>gi|313900948|ref|ZP_07834438.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Clostridium sp. HGF2]
 gi|312954368|gb|EFR36046.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Clostridium sp. HGF2]
          Length = 151

 Score =  124 bits (310), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 59/143 (41%), Positives = 88/143 (61%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  AL EA+ A   +E+P+G V V ++KII+R  N     +    HAEI+AI+  C+ +
Sbjct: 5   YMRAALREAEKAKKIDEVPIGCVIVKDDKIIARGHNLRETKQQSINHAEIIAIQKACKKV 64

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L + DLYVTLEPC MCA AI  +RIR + YG ++PKGG IE+    Y     +H P
Sbjct: 65  GSWRLEDCDLYVTLEPCCMCAGAILQSRIRTVIYGTADPKGGSIESTLHMYEQPGYNHYP 124

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           ++  G+ +    Q++++FFKE+R
Sbjct: 125 KVESGVLQNECSQLLKNFFKEKR 147


>gi|258517370|ref|YP_003193592.1| CMP/dCMP deaminase zinc-binding [Desulfotomaculum acetoxidans DSM
           771]
 gi|257781075|gb|ACV64969.1| CMP/dCMP deaminase zinc-binding [Desulfotomaculum acetoxidans DSM
           771]
          Length = 160

 Score =  123 bits (309), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 62/143 (43%), Positives = 85/143 (59%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  ALEEA  A L+ E+P+GAVAVL  ++I R  N    L D TAHAE+LA+R   R +
Sbjct: 5   FMRIALEEANKAYLKGEVPIGAVAVLGRQVIGRGHNLRESLNDSTAHAEMLALREAARFI 64

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L EV LY T+EPC MC+ A+   R++ L YGA + K G +++G      A  +H  
Sbjct: 65  GDWRLNEVILYSTIEPCAMCSGALVQFRVKLLVYGAPDVKFGAVDSGLDIVRQARFNHRV 124

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+  G+     R+I+Q FF+E R
Sbjct: 125 EVVSGVLADECREIMQRFFRELR 147


>gi|294340450|emb|CAZ88831.1| tRNA-specific adenosine deaminase [Thiomonas sp. 3As]
          Length = 187

 Score =  123 bits (309), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 64/149 (42%), Positives = 87/149 (58%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           ++    FM  AL++AQNA L  E+PVGAV V + K+I+   NR     D TAHAEI+AIR
Sbjct: 9   LEADRAFMRLALDQAQNAWLLGEVPVGAVIVKDGKVIATGYNRPIGDHDPTAHAEIVAIR 68

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
               +L    LPE  LYVTLEPC MCA A+  AR  R+ +GA +PK G   +    +   
Sbjct: 69  QAAHLLGNYRLPECTLYVTLEPCAMCAMALLHARFARVVFGARDPKTGAAGSVVDLFAEP 128

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  +I P I ++    ++QDFF+ RR
Sbjct: 129 RLNHHCDITPEIEQEACSALLQDFFRARR 157


>gi|134297898|ref|YP_001111394.1| CMP/dCMP deaminase [Desulfotomaculum reducens MI-1]
 gi|134050598|gb|ABO48569.1| tRNA-adenosine deaminase [Desulfotomaculum reducens MI-1]
          Length = 151

 Score =  123 bits (308), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 64/144 (44%), Positives = 87/144 (60%)

Query: 6   VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           +FM  AL EAQ AA++ E+P+GAV V  +++I R  +    L D +AHAEILA+R   + 
Sbjct: 5   LFMREALIEAQKAAVKGEVPIGAVVVWKDEVIGRGYDLRESLCDASAHAEILAMRKAAKH 64

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           L    L +  LYVT+EPC MCA AI   RI RL YGA N K G ++        A  +H 
Sbjct: 65  LGDWRLNDATLYVTVEPCAMCAGAIVQFRINRLVYGAPNAKSGSVDTILNIVQEARFNHR 124

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
            E+  GI E + ++IIQ+FF+E R
Sbjct: 125 VEVIAGILEDQCKEIIQNFFRELR 148


>gi|119476440|ref|ZP_01616791.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [marine
           gamma proteobacterium HTCC2143]
 gi|119450304|gb|EAW31539.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [marine
           gamma proteobacterium HTCC2143]
          Length = 159

 Score =  123 bits (308), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 62/143 (43%), Positives = 85/143 (59%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  A++ AQ A    E+PVGAV VLN+K+I    N+   L D TAHAE++AI+   + L
Sbjct: 9   YMEAAIKLAQKAGALGEVPVGAVVVLNDKVIGEGFNQPISLSDPTAHAEMVAIKDAAKAL 68

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               LPE  LYVT+EPCTMCA A+  AR++R+ YGA+  K G  E+    +     +H  
Sbjct: 69  QNYRLPEATLYVTIEPCTMCAGAMVHARVKRVVYGATESKSGVAESNGCLFDNTYLNHKV 128

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+  GI  +R   +I DFF  RR
Sbjct: 129 EVVGGIMAERCSNLISDFFAARR 151


>gi|163740840|ref|ZP_02148233.1| cytidine and deoxycytidylate deaminase family protein [Phaeobacter
           gallaeciensis 2.10]
 gi|161385831|gb|EDQ10207.1| cytidine and deoxycytidylate deaminase family protein [Phaeobacter
           gallaeciensis 2.10]
          Length = 147

 Score =  122 bits (306), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 66/129 (51%), Positives = 87/129 (67%), Gaps = 1/129 (0%)

Query: 22  NEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80
            E+PVGA  +    ++++RAGNR RE  D TAHAE+L IR  C     E L   DLYVTL
Sbjct: 15  GEVPVGAALISPEGQVVARAGNRTRERSDPTAHAEVLVIREACAAAGSERLTGHDLYVTL 74

Query: 81  EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140
           EPC MCAAAI+ ARIRR+YYGAS+PK GG+ +G   ++    HH+PE+Y GIS + +  +
Sbjct: 75  EPCAMCAAAIAAARIRRVYYGASDPKSGGVAHGACVFSHPQAHHAPEVYEGISAEPAETL 134

Query: 141 IQDFFKERR 149
           ++ FF  RR
Sbjct: 135 LKAFFAARR 143


>gi|296136215|ref|YP_003643457.1| CMP/dCMP deaminase zinc-binding protein [Thiomonas intermedia K12]
 gi|295796337|gb|ADG31127.1| CMP/dCMP deaminase zinc-binding protein [Thiomonas intermedia K12]
          Length = 187

 Score =  122 bits (306), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 63/149 (42%), Positives = 87/149 (58%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           ++    FM  AL++AQNA L  E+PVGAV V + K+I+   NR     D TAHAEI+A+R
Sbjct: 9   LEADRAFMRLALDQAQNAWLLGEVPVGAVIVKDGKVIATGYNRPIGDHDPTAHAEIVALR 68

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
               +L    LPE  LYVTLEPC MCA A+  AR  R+ +GA +PK G   +    +   
Sbjct: 69  QAAHLLGNYRLPECTLYVTLEPCAMCAMALLHARFARVVFGARDPKTGAAGSVVDLFAEP 128

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  +I P I ++    ++QDFF+ RR
Sbjct: 129 RLNHHCDITPEIEQEACSALLQDFFRARR 157


>gi|163791639|ref|ZP_02186036.1| cytidine/deoxycytidylate deaminase family protein [Carnobacterium
           sp. AT7]
 gi|159873088|gb|EDP67195.1| cytidine/deoxycytidylate deaminase family protein [Carnobacterium
           sp. AT7]
          Length = 174

 Score =  122 bits (306), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 63/143 (44%), Positives = 84/143 (58%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  A++EA  A  + E+P+GAV VLN KII R  N   E  D T HAE+LAI+   R L
Sbjct: 10  FMQEAIKEAHKAKEKLEVPIGAVVVLNGKIIGRGHNIREESNDATTHAEMLAIQEANRYL 69

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L E  L+VTLEPC MC+ A+ L+RI+ LYYGAS+PKGG              +H  
Sbjct: 70  GNWRLEETQLFVTLEPCPMCSGAMILSRIKELYYGASDPKGGTAGTLMNLLDDNRFNHQV 129

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           +I  G+ E+    ++ +FF+E R
Sbjct: 130 QIEKGLLEEECSDLLSNFFRELR 152


>gi|86140015|ref|ZP_01058579.1| cytidine and deoxycytidylate deaminase family protein [Roseobacter
           sp. MED193]
 gi|85823265|gb|EAQ43476.1| cytidine and deoxycytidylate deaminase family protein [Roseobacter
           sp. MED193]
          Length = 148

 Score =  122 bits (306), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 69/130 (53%), Positives = 89/130 (68%), Gaps = 1/130 (0%)

Query: 21  RNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVT 79
           R E+PVGAV V  + +I ++AGNR REL D TAHAEIL +R  C     E L   DLYVT
Sbjct: 19  RGEVPVGAVLVAPDGRIAAQAGNRTRELSDPTAHAEILVLREACAAGKTERLQGFDLYVT 78

Query: 80  LEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139
           LEPC MCAAAI+ AR+RR+YYGAS+PK GG+ +G   ++    HH+PEIY GI E  + +
Sbjct: 79  LEPCAMCAAAIAAARLRRVYYGASDPKSGGVAHGACVFSHPQAHHTPEIYEGIGEVEAAE 138

Query: 140 IIQDFFKERR 149
           +++ FF   R
Sbjct: 139 LLRAFFSHLR 148


>gi|326802964|ref|YP_004320782.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Aerococcus urinae ACS-120-V-Col10a]
 gi|326651114|gb|AEA01297.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Aerococcus urinae ACS-120-V-Col10a]
          Length = 162

 Score =  122 bits (305), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 60/147 (40%), Positives = 90/147 (61%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
           K + FM  A+++A+ A   +E+P+GAVAV   ++I R  N   + +D T HAE+ AIR  
Sbjct: 4   KADYFMQAAIDQAKKAQDLDEVPIGAVAVYRGQVIGRGYNLREQSQDATDHAEMQAIRQA 63

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
            R L+   L +VDLYVTLEPC+MC+ AI L+RIR LY+GAS+PK G   +          
Sbjct: 64  NRYLNNWRLNDVDLYVTLEPCSMCSGAIVLSRIRCLYFGASDPKAGTCGSLMNLVQDPRL 123

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H  ++  G+  +   Q+++ FFK+ R
Sbjct: 124 NHQVDLVSGLRGEECSQLLKSFFKDLR 150


>gi|222475328|ref|YP_002563745.1| cytosine deaminase (ssnA) [Anaplasma marginale str. Florida]
 gi|222419466|gb|ACM49489.1| cytosine deaminase (ssnA) [Anaplasma marginale str. Florida]
          Length = 154

 Score =  122 bits (305), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 68/144 (47%), Positives = 92/144 (63%), Gaps = 5/144 (3%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKII-SRAGNRNRELKDVTAHAEILAIRMGCRI 65
           +M  A++EA ++    E+PVGAV V    ++ S   N      D TAHAE+LAIR  C  
Sbjct: 9   YMRLAMQEAVSSP--AEVPVGAVVVDERGVVVSSKHNLTLRNSDPTAHAEMLAIREACLH 66

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           LS  +L   D+YVTLEPC MCA AISL+RIRRLY+GA N K GG+E+G + +    CHH 
Sbjct: 67  LSTHVLDNCDMYVTLEPCAMCAYAISLSRIRRLYFGAYNAKCGGVEHGARVFRF--CHHI 124

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
           PE+Y G  E+ + +I++ FF + R
Sbjct: 125 PEVYGGFLERENAEILKSFFYKLR 148


>gi|302390668|ref|YP_003826489.1| tRNA-adenosine deaminase [Thermosediminibacter oceani DSM 16646]
 gi|302201296|gb|ADL08866.1| tRNA-adenosine deaminase [Thermosediminibacter oceani DSM 16646]
          Length = 152

 Score =  122 bits (305), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 60/148 (40%), Positives = 87/148 (58%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           K    FM  AL+EA+ A  ++E+PVGAV      II+RA N     +D TAHAE+LAI+ 
Sbjct: 4   KDHEFFMREALKEARKAFEQDEVPVGAVIAYEGSIIARAHNLRERSQDATAHAEVLAIKA 63

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
            C  +    L    LYVTLEPC MCA AI LAR+ R+ +GA +PK G   +    + +  
Sbjct: 64  ACEAMGTWRLTGCSLYVTLEPCPMCAGAIILARLDRVVFGAPDPKAGAAGSVVDLFKVER 123

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H PE+  G+  +    +++DFF+++R
Sbjct: 124 FNHHPEVVSGVLAEECGILLKDFFRQKR 151


>gi|309390267|gb|ADO78147.1| tRNA-adenosine deaminase [Halanaerobium praevalens DSM 2228]
          Length = 154

 Score =  122 bits (305), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 61/143 (42%), Positives = 87/143 (60%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  AL EA+ A  R E+P+GAV V N++++ R  N   + +D T HAEI+A+R      
Sbjct: 7   YMKMALAEARKAYQRAEVPIGAVVVCNDQVVGRGFNLREQTQDPTTHAEIIALREAASNK 66

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  LYVTLEPC MCA AI  +RI+RL YGAS+PK G + +  Q       +H  
Sbjct: 67  VSWRLEDCQLYVTLEPCPMCAGAILQSRIKRLVYGASDPKAGAVRSLYQLLDDNRFNHQV 126

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           ++  GI E+ S Q+++DFF+E R
Sbjct: 127 KVEAGIMEKESAQLLKDFFRELR 149


>gi|269958624|ref|YP_003328411.1| putative cytosine/adenosine deaminase [Anaplasma centrale str.
           Israel]
 gi|269848453|gb|ACZ49097.1| putative cytosine/adenosine deaminase [Anaplasma centrale str.
           Israel]
          Length = 154

 Score =  121 bits (304), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 66/144 (45%), Positives = 92/144 (63%), Gaps = 5/144 (3%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKI-ISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           +M  A+ EA ++    E+PVGA+ V    + IS   N      D TAHAE+LAIR  C  
Sbjct: 9   YMRLAMLEAVSSPA--EVPVGAIVVDERGVVISSRHNLTLRNSDPTAHAEMLAIREACLH 66

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
            S  +L   D+YVTLEPC MCA AISL+RIRRLY+GA N K GG+E+G + +    C+H 
Sbjct: 67  FSTHVLNNCDMYVTLEPCAMCAYAISLSRIRRLYFGAYNVKCGGVEHGARVFRF--CNHI 124

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
           PE+Y G  E+ + +I+++FF++ R
Sbjct: 125 PEVYGGFLERENAEILKNFFQKLR 148


>gi|89070783|ref|ZP_01158036.1| cytidine and deoxycytidylate deaminase family protein [Oceanicola
           granulosus HTCC2516]
 gi|89043625|gb|EAR49832.1| cytidine and deoxycytidylate deaminase family protein [Oceanicola
           granulosus HTCC2516]
          Length = 149

 Score =  121 bits (304), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 62/111 (55%), Positives = 75/111 (67%)

Query: 39  RAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98
           RAGNR REL D TAHAE+LAIR  C     + LP  DLYVTLEPC MCAAAI  ARI RL
Sbjct: 39  RAGNRTRELADPTAHAELLAIRAACAAAGSDRLPGHDLYVTLEPCPMCAAAIGFARIARL 98

Query: 99  YYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
           YYGA++PK GG+ +G +       HH PEIY GI+   +  +++DFF + R
Sbjct: 99  YYGAADPKSGGVAHGPRVLAHPQSHHRPEIYDGIAAGPAAALLRDFFADLR 149


>gi|110679276|ref|YP_682283.1| cytidine and deoxycytidylate deaminase family protein [Roseobacter
           denitrificans OCh 114]
 gi|109455392|gb|ABG31597.1| cytidine and deoxycytidylate deaminase family protein [Roseobacter
           denitrificans OCh 114]
          Length = 155

 Score =  121 bits (304), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 71/130 (54%), Positives = 89/130 (68%), Gaps = 1/130 (0%)

Query: 21  RNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVT 79
           R E+PVGAV V  +  II+ AGN+ R   D TAHAEILAIR  C +L  E L +  LYVT
Sbjct: 26  RGEVPVGAVIVAPDGAIIAAAGNQTRADHDPTAHAEILAIRRACAVLGSERLLDHALYVT 85

Query: 80  LEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139
           LEPC MCAAAIS ARI RLYYGAS+PK GG+  G + ++   CHH+PE++ GI+   S  
Sbjct: 86  LEPCAMCAAAISAARISRLYYGASDPKSGGVAQGARVFSHPQCHHAPEVFDGIAAAESEA 145

Query: 140 IIQDFFKERR 149
           +++ FF  RR
Sbjct: 146 MLRGFFTARR 155


>gi|329851126|ref|ZP_08265883.1| cytidine and deoxycytidylate deaminase zinc-binding region family
           protein [Asticcacaulis biprosthecum C19]
 gi|328839972|gb|EGF89544.1| cytidine and deoxycytidylate deaminase zinc-binding region family
           protein [Asticcacaulis biprosthecum C19]
          Length = 154

 Score =  121 bits (304), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 63/146 (43%), Positives = 87/146 (59%), Gaps = 2/146 (1%)

Query: 6   VFMSCALEEAQNAALRNEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
             M  AL+ A  AA   E+P+GA+     +  +++ A N    L D  AHAEILA+R   
Sbjct: 7   TLMLAALDLAHEAARSGEVPIGALIFDPSSKTVVATARNSPILLNDPCAHAEILALRAAG 66

Query: 64  RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123
           + +    L  + LYVTLEPC MCA AIS ARI R+ YGA +PKGG + +G +F+   TCH
Sbjct: 67  QAIGNYRLGGLWLYVTLEPCAMCAGAISHARIARVIYGAPDPKGGAVAHGPKFFAQPTCH 126

Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149
             PE+  G+  + S  +++ FFKERR
Sbjct: 127 WRPEVTDGVLGEDSSALLKGFFKERR 152


>gi|56416962|ref|YP_154036.1| cytosine deaminase [Anaplasma marginale str. St. Maries]
 gi|56388194|gb|AAV86781.1| cytosine deaminase [Anaplasma marginale str. St. Maries]
          Length = 154

 Score =  121 bits (304), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 69/150 (46%), Positives = 94/150 (62%), Gaps = 5/150 (3%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKII-SRAGNRNRELKDVTAHAEILAI 59
           M   + +M  A++EA ++    E+PVGAV V    ++ S   N      D TAHAE+LAI
Sbjct: 3   MLSESPYMRLAMQEAVSSP--AEVPVGAVVVDERGVVVSSRHNLTLRNSDPTAHAEMLAI 60

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
           R  C  LS  +L   D+YVTLEPC MCA AISL+RIRRLY+GA N K GG+E+G + +  
Sbjct: 61  REACLHLSTHVLDNCDMYVTLEPCAMCAYAISLSRIRRLYFGAYNAKCGGVEHGARVFRF 120

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             CHH PE+Y G  E+ + +I++ FF + R
Sbjct: 121 --CHHIPEVYGGFLERENAEILKSFFYKLR 148


>gi|254995140|ref|ZP_05277330.1| cytosine deaminase (ssnA) [Anaplasma marginale str. Mississippi]
 gi|255003311|ref|ZP_05278275.1| cytosine deaminase (ssnA) [Anaplasma marginale str. Puerto Rico]
 gi|255004436|ref|ZP_05279237.1| cytosine deaminase (ssnA) [Anaplasma marginale str. Virginia]
          Length = 153

 Score =  121 bits (304), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 69/150 (46%), Positives = 94/150 (62%), Gaps = 5/150 (3%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKII-SRAGNRNRELKDVTAHAEILAI 59
           M   + +M  A++EA ++    E+PVGAV V    ++ S   N      D TAHAE+LAI
Sbjct: 2   MLSESPYMRLAMQEAVSSP--AEVPVGAVVVDERGVVVSSRHNLTLRNSDPTAHAEMLAI 59

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
           R  C  LS  +L   D+YVTLEPC MCA AISL+RIRRLY+GA N K GG+E+G + +  
Sbjct: 60  REACLHLSTHVLDNCDMYVTLEPCAMCAYAISLSRIRRLYFGAYNAKCGGVEHGARVFRF 119

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             CHH PE+Y G  E+ + +I++ FF + R
Sbjct: 120 --CHHIPEVYGGFLERENAEILKSFFYKLR 147


>gi|20806575|ref|NP_621746.1| cytosine/adenosine deaminase [Thermoanaerobacter tengcongensis MB4]
 gi|20515016|gb|AAM23350.1| Cytosine/adenosine deaminases [Thermoanaerobacter tengcongensis
           MB4]
          Length = 148

 Score =  121 bits (304), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 64/145 (44%), Positives = 87/145 (60%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           N FM  AL+EA+ +    E+PVGAV V + +II+R  N+    KD TAHAEI+AIR  CR
Sbjct: 3   NKFMEEALKEAKKSYELGEVPVGAVIVKDGEIIARGHNQKESSKDATAHAEIIAIREACR 62

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
            L    L +  LYVTLEPC MCA AI  ARI+R+Y G  +PK G   +            
Sbjct: 63  RLGSWRLEDCSLYVTLEPCPMCAGAIVEARIKRVYIGTESPKEGAAGSVINILNNKELGT 122

Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149
           S E+Y GI E+ ++++++ FF+  R
Sbjct: 123 STEVYFGIMEEEAKELLKKFFENLR 147


>gi|332800258|ref|YP_004461757.1| CMP/dCMP deaminase zinc-binding protein [Tepidanaerobacter sp. Re1]
 gi|332697993|gb|AEE92450.1| CMP/dCMP deaminase zinc-binding protein [Tepidanaerobacter sp. Re1]
          Length = 160

 Score =  121 bits (304), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 62/148 (41%), Positives = 88/148 (59%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           K    FM  A++EA+ A   +E+P+GAV V  +++I+RA N    L+D TAHAE+LAIR 
Sbjct: 8   KDDFFFMRQAIQEAKRAMEIDEVPIGAVIVKADEVIARAHNLRETLQDATAHAELLAIRK 67

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
            C +L    L    LYVTLEPC MCA A+ L+R+ RL +GA +PKGG   +         
Sbjct: 68  ACEVLGTWRLEGCTLYVTLEPCPMCAGAVILSRVDRLVFGAKDPKGGACGSLMNLPADER 127

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H P+I  GI       I++ FF+++R
Sbjct: 128 FNHRPKIAAGIMADECGNILKKFFQDKR 155


>gi|325270697|ref|ZP_08137293.1| tRNA-specific adenosine deaminase [Prevotella multiformis DSM
           16608]
 gi|324986992|gb|EGC18979.1| tRNA-specific adenosine deaminase [Prevotella multiformis DSM
           16608]
          Length = 199

 Score =  121 bits (304), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 67/149 (44%), Positives = 87/149 (58%), Gaps = 5/149 (3%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           MKK   +M  AL EA+ A    EIPVGAV V  ++II+RA N    L DVTAHAE+ AI 
Sbjct: 56  MKKDLYYMRQALAEAEAAYREGEIPVGAVVVCRDRIIARAHNLTETLNDVTAHAEMQAIT 115

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
           M    L  + L +  LYVTLEPCTMCA AI  A++RR+ YG  + K      G + Y   
Sbjct: 116 MAASGLGGKYLQDCTLYVTLEPCTMCAGAIGWAQLRRMVYGCPDEK-----RGYRLYAPR 170

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             H   E+  G+ E+  + ++Q FF+ERR
Sbjct: 171 ALHPRAEVVCGVMEEECKALMQRFFRERR 199


>gi|114569170|ref|YP_755850.1| tRNA-adenosine deaminase [Maricaulis maris MCS10]
 gi|114339632|gb|ABI64912.1| tRNA-adenosine deaminase [Maricaulis maris MCS10]
          Length = 174

 Score =  120 bits (302), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 62/127 (48%), Positives = 81/127 (63%), Gaps = 2/127 (1%)

Query: 25  PVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEP 82
           P+GA+ V    + I+++A NR     D TAHAEILA+R     L    L  ++LYVTLEP
Sbjct: 35  PIGAIIVDPATDSIVAQAHNRPIADHDPTAHAEILALREAAAKLGNYRLTGLELYVTLEP 94

Query: 83  CTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQ 142
           C MCA AIS ARI RL +GAS+ KGG + +GT+F+   TCH  PEI PGI       +++
Sbjct: 95  CAMCAGAISHARIGRLVFGASDEKGGAVVSGTRFFEQPTCHWRPEIVPGILADEGAAMLK 154

Query: 143 DFFKERR 149
           DFF+ RR
Sbjct: 155 DFFRARR 161


>gi|160914820|ref|ZP_02077034.1| hypothetical protein EUBDOL_00828 [Eubacterium dolichum DSM 3991]
 gi|158433360|gb|EDP11649.1| hypothetical protein EUBDOL_00828 [Eubacterium dolichum DSM 3991]
          Length = 152

 Score =  120 bits (302), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 60/143 (41%), Positives = 86/143 (60%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  A++EA+ A L +E+P+G V V ++KII+R  N     +  TAHAEI+AI   CR L
Sbjct: 5   FMVEAIKEAKKAELIDEVPIGCVIVKDDKIIARGHNLRESKQRSTAHAEIIAIEKACRKL 64

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L    LYVTLEPC MC+ AI  +RI  + YGA +PKGG +E+    Y +   +H P
Sbjct: 65  KSWRLEGCSLYVTLEPCPMCSGAILQSRIEHVVYGAKDPKGGCMESCMNMYEVKGFNHYP 124

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           ++  G+ E     +++ FFK +R
Sbjct: 125 DVIGGVLEDECGSLLKTFFKRKR 147


>gi|148543562|ref|YP_001270932.1| tRNA-adenosine deaminase [Lactobacillus reuteri DSM 20016]
 gi|184152969|ref|YP_001841310.1| cytosine/adenosine deaminase [Lactobacillus reuteri JCM 1112]
 gi|227363478|ref|ZP_03847600.1| tRNA-adenosine deaminase [Lactobacillus reuteri MM2-3]
 gi|325681912|ref|ZP_08161430.1| tRNA-specific adenosine deaminase [Lactobacillus reuteri MM4-1A]
 gi|148530596|gb|ABQ82595.1| tRNA-adenosine deaminase [Lactobacillus reuteri DSM 20016]
 gi|183224313|dbj|BAG24830.1| cytosine/adenosine deaminase [Lactobacillus reuteri JCM 1112]
 gi|227071492|gb|EEI09793.1| tRNA-adenosine deaminase [Lactobacillus reuteri MM2-3]
 gi|324978556|gb|EGC15505.1| tRNA-specific adenosine deaminase [Lactobacillus reuteri MM4-1A]
          Length = 170

 Score =  120 bits (301), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 59/152 (38%), Positives = 90/152 (59%), Gaps = 7/152 (4%)

Query: 1   MKKGNV-------FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAH 53
           MKK N        FM  A+ EA+ A + +E+P+GA+ V + ++I R  N   + +DVT H
Sbjct: 1   MKKNNSSLSEQQKFMKMAIAEAKQARILDEVPIGAIVVHDGQVIGRGHNMREKFQDVTYH 60

Query: 54  AEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENG 113
           AE+LAI   C  L    L + DLYVTLEPC MC+ AI  ARI+ +YYGA++PK G +++ 
Sbjct: 61  AEMLAIMEACTNLGSWRLEDCDLYVTLEPCIMCSGAIINARIKNVYYGAADPKAGAVDSL 120

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
               + +  +H   ++ GI      Q++++FF
Sbjct: 121 YHLLSDSRLNHQVNVHSGILGDECSQMLKNFF 152


>gi|329902676|ref|ZP_08273230.1| tRNA-specific adenosine-34 deaminase [Oxalobacteraceae bacterium
           IMCC9480]
 gi|327548648|gb|EGF33298.1| tRNA-specific adenosine-34 deaminase [Oxalobacteraceae bacterium
           IMCC9480]
          Length = 161

 Score =  120 bits (300), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 60/145 (41%), Positives = 87/145 (60%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           +VFM  A+++A NA    E+PVGAV V + ++I+   N++    D TAHAEI+A+R G  
Sbjct: 4   SVFMRLAMDQAHNAWALGEVPVGAVLVKDGQVIATGFNQSIGTHDPTAHAEIMALRAGAS 63

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
           +L    LP  +LYVTLEPC MCA A+  AR+ R+ YGAS+PK G   +    +  A  +H
Sbjct: 64  LLGNYRLPGCELYVTLEPCAMCAGAMMHARLARVVYGASDPKTGCCGSVLDLFGQAQLNH 123

Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149
              +  G+       +++DFF ERR
Sbjct: 124 HTGLVGGVLADACSALLKDFFAERR 148


>gi|220932912|ref|YP_002509820.1| tRNA-adenosine deaminase [Halothermothrix orenii H 168]
 gi|219994222|gb|ACL70825.1| tRNA-adenosine deaminase [Halothermothrix orenii H 168]
          Length = 159

 Score =  120 bits (300), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 67/149 (44%), Positives = 84/149 (56%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           MK    FM  ALEEA+ A    E+P+GAV V N +I+    N      D TAHAEI+AIR
Sbjct: 1   MKTDEDFMELALEEARKALALEEVPIGAVVVCNGEIVGSGHNLKETENDPTAHAEIVAIR 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              R LS   L E  LYVT+EPC MCA AI  AR++R+ YGA +PK G   +        
Sbjct: 61  DAARKLSSWRLNECQLYVTIEPCPMCAGAIMQARLQRVVYGAVDPKAGVAGSLYNLLQDN 120

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H+ E+  G+     RQII+DFF E R
Sbjct: 121 RFNHTVELKSGVLAAECRQIIKDFFSELR 149


>gi|332557706|ref|ZP_08412028.1| hypothetical protein RSWS8N_01605 [Rhodobacter sphaeroides WS8N]
 gi|332275418|gb|EGJ20733.1| hypothetical protein RSWS8N_01605 [Rhodobacter sphaeroides WS8N]
          Length = 150

 Score =  120 bits (300), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 66/115 (57%), Positives = 80/115 (69%), Gaps = 1/115 (0%)

Query: 35  KIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLAR 94
           ++++RAGNR REL D TAHAE+LAIR  C  L  E L   DLYVTLEPC MCAAAIS AR
Sbjct: 35  QVVARAGNRCRELSDPTAHAEMLAIRAACATLG-ERLTGCDLYVTLEPCPMCAAAISAAR 93

Query: 95  IRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
           I RLYYGA++PK GG+  G + +    CHH PEIY GI E  +  +++ FF  RR
Sbjct: 94  IARLYYGAADPKSGGVAQGARVFAHPQCHHVPEIYDGIGEAEAAALLRGFFSARR 148


>gi|254490420|ref|ZP_05103607.1| Cytidine and deoxycytidylate deaminase zinc-binding region domain
           protein [Methylophaga thiooxidans DMS010]
 gi|224464386|gb|EEF80648.1| Cytidine and deoxycytidylate deaminase zinc-binding region domain
           protein [Methylophaga thiooxydans DMS010]
          Length = 149

 Score =  120 bits (300), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 58/143 (40%), Positives = 85/143 (59%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  AL  AQ A    E+PVGAV VLNN+II    N+     D TAHAEI+A+R  C+++
Sbjct: 7   WMQRALALAQRAEAEGEVPVGAVIVLNNEIIGEGWNQPISANDATAHAEIIALRQACQLM 66

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
           +   LP  D+Y+TLEPC MCA A+  ARI ++ Y  + PK G   +    +TL   +H  
Sbjct: 67  NNYRLPGADMYITLEPCAMCAGALVHARINKVVYATAEPKTGAAGSCVDIFTLPNLNHRV 126

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
               G+  ++S Q+++ FF+ +R
Sbjct: 127 STESGLLAEQSSQLLRQFFRGKR 149


>gi|163797849|ref|ZP_02191794.1| Cytosine/adenosine deaminase [alpha proteobacterium BAL199]
 gi|159176893|gb|EDP61460.1| Cytosine/adenosine deaminase [alpha proteobacterium BAL199]
          Length = 150

 Score =  120 bits (300), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 68/134 (50%), Positives = 90/134 (67%), Gaps = 2/134 (1%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           G+ +M+ AL +A++AA   E+PVGAV V   + ++++ AGNR     D TAHAE+LAIR 
Sbjct: 3   GDGYMARALAQAESAASAGEVPVGAVVVHAPSGRVLAEAGNRVETDCDPTAHAEVLAIRA 62

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
             R L    L + DLYVTLEPC MCA AI+ AR+RRL +GA +PKGGG+E+G +     T
Sbjct: 63  AARALGAPRLVDCDLYVTLEPCAMCAQAIAHARLRRLVFGAYDPKGGGVEHGARVLEQPT 122

Query: 122 CHHSPEIYPGISEQ 135
           CHH PEI  G+ E 
Sbjct: 123 CHHRPEIVGGVEES 136


>gi|260584497|ref|ZP_05852244.1| cytidine/deoxycytidylate deaminase [Granulicatella elegans ATCC
           700633]
 gi|260158015|gb|EEW93084.1| cytidine/deoxycytidylate deaminase [Granulicatella elegans ATCC
           700633]
          Length = 170

 Score =  119 bits (299), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 59/145 (40%), Positives = 89/145 (61%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           K+  +FM  AL+EAQ A  + E+P+GAV VLN +II R  N   + +D T HAEI AIR 
Sbjct: 7   KEKEMFMREALKEAQKAYDKEEVPIGAVVVLNGEIIGRGHNLREKEQDATLHAEIKAIRQ 66

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
             ++L    L + +L+VTLEPC MC+ A+ L+R++++ +GA +PK G             
Sbjct: 67  ANQVLGSWRLEDCELFVTLEPCPMCSGAMILSRLKKVTFGAFDPKAGTAGTFMNLLQDER 126

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFK 146
            +H  E+  G+ E+  +QI++DFFK
Sbjct: 127 FNHQVEVEHGVLEEECQQILKDFFK 151


>gi|288800754|ref|ZP_06406211.1| cytidine/deoxycytidylate deaminase family protein [Prevotella sp.
           oral taxon 299 str. F0039]
 gi|288332215|gb|EFC70696.1| cytidine/deoxycytidylate deaminase family protein [Prevotella sp.
           oral taxon 299 str. F0039]
          Length = 144

 Score =  119 bits (299), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 67/149 (44%), Positives = 88/149 (59%), Gaps = 5/149 (3%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           MK    FM+ ALE+AQ A    EIPVGAV V  +KII+R+ N    L DVTAHAE+ AI 
Sbjct: 1   MKGDEWFMTKALEQAQLALEAGEIPVGAVVVAKDKIIARSHNLTEMLCDVTAHAEMQAIT 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
            G   L  + L E  LYVTLEPC MCA AI  +++ RL YGAS+ K G +      +   
Sbjct: 61  SGTNSLGGKYLNECTLYVTLEPCVMCAGAIGWSQLGRLVYGASDDKRGFMR-----FAPN 115

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             H   ++  G+ E+  + IIQ+FF+ +R
Sbjct: 116 ALHPKTKVTKGVMEEECKTIIQNFFRSKR 144


>gi|194468109|ref|ZP_03074095.1| CMP/dCMP deaminase zinc-binding [Lactobacillus reuteri 100-23]
 gi|194452962|gb|EDX41860.1| CMP/dCMP deaminase zinc-binding [Lactobacillus reuteri 100-23]
          Length = 170

 Score =  119 bits (299), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 59/152 (38%), Positives = 90/152 (59%), Gaps = 7/152 (4%)

Query: 1   MKKGNV-------FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAH 53
           MKK N        FM  A+ EA+ A + +E+P+GA+ V + ++I    N   + +DVT H
Sbjct: 1   MKKNNSSLSEQQKFMKMAIAEAKQARILDEVPIGAIVVHDGQVIGCGHNMREKFQDVTYH 60

Query: 54  AEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENG 113
           AE+LAI   C  L    L + DLYVTLEPC MC+ AI  ARI+ +YYGA++PK G +++ 
Sbjct: 61  AEMLAIMEACTNLESWRLEDCDLYVTLEPCIMCSGAIINARIKNVYYGATDPKAGAVDSL 120

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
               + +  +H   ++ GI E    Q++++FF
Sbjct: 121 YHLLSDSRLNHQVNVHSGILEDECSQMLKNFF 152


>gi|77462818|ref|YP_352322.1| hypothetical protein RSP_2267 [Rhodobacter sphaeroides 2.4.1]
 gi|77387236|gb|ABA78421.1| cytidine and deoxycytidylate deaminase family protein [Rhodobacter
           sphaeroides 2.4.1]
          Length = 150

 Score =  119 bits (299), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 65/115 (56%), Positives = 80/115 (69%), Gaps = 1/115 (0%)

Query: 35  KIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLAR 94
           ++++RAGNR REL D TAHAE+LAIR  C  L  E L   DLYVTLEPC MCAAAIS AR
Sbjct: 35  QVVARAGNRCRELSDPTAHAEMLAIRAACATLG-ERLTGCDLYVTLEPCPMCAAAISAAR 93

Query: 95  IRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
           I RLYYGA++PK GG+  G + +    CHH PE+Y GI E  +  +++ FF  RR
Sbjct: 94  IARLYYGAADPKSGGVAQGARVFAHPQCHHVPEVYDGIGEAEAAALLRGFFSARR 148


>gi|221638686|ref|YP_002524948.1| CMP/dCMP deaminase, zinc-binding [Rhodobacter sphaeroides KD131]
 gi|221159467|gb|ACM00447.1| CMP/dCMP deaminase, zinc-binding [Rhodobacter sphaeroides KD131]
          Length = 144

 Score =  119 bits (299), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 65/115 (56%), Positives = 80/115 (69%), Gaps = 1/115 (0%)

Query: 35  KIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLAR 94
           ++++RAGNR REL D TAHAE+LAIR  C  L  E L   DLYVTLEPC MCAAAIS AR
Sbjct: 29  QVVARAGNRCRELSDPTAHAEMLAIRAACATLG-ERLTGCDLYVTLEPCPMCAAAISAAR 87

Query: 95  IRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
           I RLYYGA++PK GG+  G + +    CHH PE+Y GI E  +  +++ FF  RR
Sbjct: 88  IARLYYGAADPKSGGVAQGARVFAHPQCHHVPEVYDGIGEAEAAALLRGFFAARR 142


>gi|89100955|ref|ZP_01173801.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein
           [Bacillus sp. NRRL B-14911]
 gi|89084326|gb|EAR63481.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein
           [Bacillus sp. NRRL B-14911]
          Length = 180

 Score =  119 bits (299), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 60/140 (42%), Positives = 84/140 (60%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  A+EEA+ A    E+P+GAV VL+ KIISRA N     ++  AHAE+LAI   C +L
Sbjct: 15  YMKEAIEEAKKAGELGEVPIGAVVVLDGKIISRAHNLRESNQNAVAHAELLAIEEACGML 74

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  LYVTLEPC MC+ AI L+RI+R+ YGA++PKGG              +H  
Sbjct: 75  GTWRLEDAALYVTLEPCAMCSGAIILSRIKRVVYGAADPKGGCAGTFMNLLQDERFNHQS 134

Query: 127 EIYPGISEQRSRQIIQDFFK 146
           E+  G+ E+    ++ DFF+
Sbjct: 135 EVSAGVLEEECGSLLTDFFR 154


>gi|218283248|ref|ZP_03489309.1| hypothetical protein EUBIFOR_01897 [Eubacterium biforme DSM 3989]
 gi|218216003|gb|EEC89541.1| hypothetical protein EUBIFOR_01897 [Eubacterium biforme DSM 3989]
          Length = 158

 Score =  119 bits (299), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 58/143 (40%), Positives = 89/143 (62%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  A+++A+ A   +E+P+G V V ++KII+R  N+   L+   AHAEI+AI+  C+ L
Sbjct: 8   WMKEAIKQAKKAESYDEVPIGCVIVKDDKIIARGYNKRETLQQSIAHAEIMAIQKACKKL 67

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  LYVTLEPC MCA AI  +RI+ + YGAS+PKGG +   T  + ++  +H P
Sbjct: 68  GTWRLEDCVLYVTLEPCPMCAGAIIQSRIKEVVYGASDPKGGCVGTCTNLFEVSEFNHHP 127

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
               GI E     +++ FFK++R
Sbjct: 128 IYRRGILESDCSDLLKHFFKKKR 150


>gi|78043781|ref|YP_361468.1| cytidine/deoxycytidylate deaminase family protein [Carboxydothermus
           hydrogenoformans Z-2901]
 gi|77995896|gb|ABB14795.1| cytidine/deoxycytidylate deaminase family protein [Carboxydothermus
           hydrogenoformans Z-2901]
          Length = 153

 Score =  119 bits (299), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 62/143 (43%), Positives = 84/143 (58%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM+ AL+EA+ AAL+ E+PVGAV V N +II R  N      D TAHAEI+A++     L
Sbjct: 6   FMAEALKEAEKAALQGEVPVGAVVVYNGEIIGRGHNLRETFSDPTAHAEIVALKEAASKL 65

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  LYVT+EPC MCA AI  ARI+ L YGA + K G ++           +H  
Sbjct: 66  KNWQLKDCTLYVTVEPCPMCAGAIYQARIKTLVYGAPDLKAGAVDTLFDLVRNPRLNHRV 125

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+  G+    + +II DFF+E+R
Sbjct: 126 EVISGVLAAEASKIITDFFREKR 148


>gi|326403669|ref|YP_004283751.1| tRNA-specific adenosine deaminase [Acidiphilium multivorum AIU301]
 gi|325050531|dbj|BAJ80869.1| tRNA-specific adenosine deaminase [Acidiphilium multivorum AIU301]
          Length = 154

 Score =  119 bits (298), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 57/130 (43%), Positives = 84/130 (64%), Gaps = 1/130 (0%)

Query: 21  RNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVT 79
           R E+PVGAV V     +++ AGN      D TAHAEILA+R   +    + L    L+VT
Sbjct: 17  RGEVPVGAVVVDAGGSVLAAAGNEVEARGDPTAHAEILALRAAAQRRGGKFLQGCRLFVT 76

Query: 80  LEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139
           LEPC +CAAAISL RI RL +GA +PK GG+E+G + ++  TCH+ PE+  G+ +  + +
Sbjct: 77  LEPCPLCAAAISLFRIDRLVFGAYDPKSGGVEHGPRVFSHPTCHYRPEVVGGVDQTAAAE 136

Query: 140 IIQDFFKERR 149
           +++ FF ++R
Sbjct: 137 LLRHFFSQKR 146


>gi|229009532|ref|ZP_04166761.1| hypothetical protein bmyco0001_110 [Bacillus mycoides DSM 2048]
 gi|229131029|ref|ZP_04259944.1| hypothetical protein bcere0014_100 [Bacillus cereus BDRD-ST196]
 gi|228652424|gb|EEL08346.1| hypothetical protein bcere0014_100 [Bacillus cereus BDRD-ST196]
 gi|228751743|gb|EEM01540.1| hypothetical protein bmyco0001_110 [Bacillus mycoides DSM 2048]
          Length = 164

 Score =  119 bits (298), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 63/149 (42%), Positives = 87/149 (58%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M++   FM  A+EEA+ A    E+P+GAV VL+ ++IS A N     +   AHAE+LAI 
Sbjct: 1   MERDIYFMQLAIEEAKKAEAIQEVPIGAVIVLDGEVISVAHNLRETEQRSIAHAELLAID 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
             C+ L    L +  LYVTLEPC MCA  I L+RI+R+ YGAS+PKGG         T  
Sbjct: 61  EACKKLGTWRLEDATLYVTLEPCPMCAGGIVLSRIKRVVYGASDPKGGCAGTLMNLLTDE 120

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  E+ PG+ E+    ++  FF+E R
Sbjct: 121 RFNHQCEVVPGVLEEECGTLLTIFFRELR 149


>gi|281421269|ref|ZP_06252268.1| tRNA-specific adenosine deaminase [Prevotella copri DSM 18205]
 gi|281404804|gb|EFB35484.1| tRNA-specific adenosine deaminase [Prevotella copri DSM 18205]
          Length = 148

 Score =  119 bits (298), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 65/148 (43%), Positives = 85/148 (57%), Gaps = 5/148 (3%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           KK   +M  AL EAQ A   +EIPVGA+ V  ++IISRA N    L DVTAHAE+ AI  
Sbjct: 6   KKDEAYMRRALMEAQAAFDEDEIPVGAIIVCKDRIISRAHNLTEMLTDVTAHAEMQAITS 65

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
           G  +L  + L +  LYVT+EPC MCA A+  A+I R+ YGAS+ K      G   Y    
Sbjct: 66  GANMLGGKYLKDCTLYVTVEPCVMCAGALGWAQISRVVYGASDEK-----RGYTKYAPDA 120

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            H    +  G+ E   R ++QDFF+ +R
Sbjct: 121 LHPKTTVTSGVLEDECRALMQDFFQRKR 148


>gi|255994527|ref|ZP_05427662.1| tRNA-specific adenosine deaminase [Eubacterium saphenum ATCC 49989]
 gi|255993240|gb|EEU03329.1| tRNA-specific adenosine deaminase [Eubacterium saphenum ATCC 49989]
          Length = 151

 Score =  119 bits (298), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 64/143 (44%), Positives = 83/143 (58%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  ALEEA+ A  + E+PVGAV V N K+IS+A N  R+ K+  AHAEILAI   C+ L
Sbjct: 5   FMRVALEEAKKAYKQGEVPVGAVIVKNGKVISKAHNETRQKKNAVAHAEILAIDKACKKL 64

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
             E L + ++YVTLEPC MCA AI  ARI  +  G  + K G              +H  
Sbjct: 65  ENERLVDTEMYVTLEPCAMCAGAIVQARIPEVMIGTRDLKSGAANTILNVLENEKLNHRA 124

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+  GI E+   +I++ FFKE R
Sbjct: 125 ELRFGIFEEECSEILKTFFKELR 147


>gi|148260476|ref|YP_001234603.1| CMP/dCMP deaminase, zinc-binding [Acidiphilium cryptum JF-5]
 gi|146402157|gb|ABQ30684.1| tRNA-adenosine deaminase [Acidiphilium cryptum JF-5]
          Length = 151

 Score =  119 bits (298), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 57/130 (43%), Positives = 84/130 (64%), Gaps = 1/130 (0%)

Query: 21  RNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVT 79
           R E+PVGAV V     +++ AGN      D TAHAEILA+R   +    + L    L+VT
Sbjct: 14  RGEVPVGAVVVDAGGSVLAAAGNEVEARGDPTAHAEILALRAAAQRRGGKFLQGCRLFVT 73

Query: 80  LEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139
           LEPC +CAAAISL RI RL +GA +PK GG+E+G + ++  TCH+ PE+  G+ +  + +
Sbjct: 74  LEPCPLCAAAISLFRIDRLVFGAYDPKSGGVEHGPRVFSHPTCHYRPEVVGGVDQTAAAE 133

Query: 140 IIQDFFKERR 149
           +++ FF ++R
Sbjct: 134 LLRHFFSQKR 143


>gi|83859467|ref|ZP_00952988.1| cytidine and deoxycytidylate deaminase family protein [Oceanicaulis
           alexandrii HTCC2633]
 gi|83852914|gb|EAP90767.1| cytidine and deoxycytidylate deaminase family protein [Oceanicaulis
           alexandrii HTCC2633]
          Length = 164

 Score =  119 bits (298), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 60/129 (46%), Positives = 82/129 (63%), Gaps = 2/129 (1%)

Query: 23  EIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80
           E PVGAV V    + II+ AGN      D T HAEI A+R+  + L    L  ++LYVTL
Sbjct: 32  ETPVGAVIVDPQTDNIIAEAGNAPISDCDPTGHAEIRALRLAAQKLGNYRLTGLELYVTL 91

Query: 81  EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140
           EPC MCA AIS ARI ++ YGAS+PKGG +++G QF+   TCH  PE+  G+    + ++
Sbjct: 92  EPCAMCAGAISHARIGKVIYGASDPKGGAVDHGPQFFAQPTCHWRPEVQGGVLADEASEM 151

Query: 141 IQDFFKERR 149
           ++ FF+ RR
Sbjct: 152 LKAFFRARR 160


>gi|229165011|ref|ZP_04292809.1| hypothetical protein bcere0007_110 [Bacillus cereus AH621]
 gi|228618463|gb|EEK75490.1| hypothetical protein bcere0007_110 [Bacillus cereus AH621]
          Length = 164

 Score =  119 bits (298), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 63/149 (42%), Positives = 87/149 (58%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M++   FM  A+EEA+ A    E+P+GAV VL+ ++IS A N     +   AHAE+LAI 
Sbjct: 1   MERDIYFMQLAIEEAKKAEAIQEVPIGAVIVLDGEVISVAHNLRETEQRSIAHAELLAID 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
             C+ L    L +  LYVTLEPC MCA  I L+RI+R+ YGAS+PKGG         T  
Sbjct: 61  EACKKLGTWRLEDATLYVTLEPCPMCAGGIVLSRIKRVIYGASDPKGGCAGTLMNLLTDE 120

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  E+ PG+ E+    ++  FF+E R
Sbjct: 121 RFNHQCEVVPGVLEEECGTLLTIFFRELR 149


>gi|126461710|ref|YP_001042824.1| CMP/dCMP deaminase, zinc-binding [Rhodobacter sphaeroides ATCC
           17029]
 gi|126103374|gb|ABN76052.1| CMP/dCMP deaminase, zinc-binding [Rhodobacter sphaeroides ATCC
           17029]
          Length = 150

 Score =  119 bits (298), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 65/115 (56%), Positives = 80/115 (69%), Gaps = 1/115 (0%)

Query: 35  KIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLAR 94
           ++++RAGNR REL D TAHAE+LAIR  C  L  E L   DLYVTLEPC MCAAAIS AR
Sbjct: 35  QVVARAGNRCRELSDPTAHAEMLAIRAACATLG-ERLTGCDLYVTLEPCPMCAAAISAAR 93

Query: 95  IRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
           I RLYYGA++PK GG+  G + +    CHH PE+Y GI E  +  +++ FF  RR
Sbjct: 94  IARLYYGAADPKSGGVAQGARVFAHPQCHHVPEVYDGIGEAEAAALLRGFFAARR 148


>gi|152973870|ref|YP_001373387.1| CMP/dCMP deaminase zinc-binding [Bacillus cereus subsp. cytotoxis
           NVH 391-98]
 gi|152022622|gb|ABS20392.1| CMP/dCMP deaminase zinc-binding [Bacillus cytotoxicus NVH 391-98]
          Length = 164

 Score =  119 bits (298), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 62/149 (41%), Positives = 85/149 (57%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M++   FM  A+EEA+ A    E+P+GAV VL+ K+IS A N     +   AHAE+LAI 
Sbjct: 1   MEQDMYFMKLAIEEAKKAEKIEEVPIGAVLVLDGKVISSAHNLRETEQRSIAHAELLAID 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
             C+ L    L    LYVTLEPC MCA  I L+R++R+ YGAS+PKGG         T  
Sbjct: 61  KACKALGTWRLEHATLYVTLEPCPMCAGGIVLSRVKRVVYGASDPKGGCAGTLMNLLTDE 120

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  E+  G+ E+    ++  FF+E R
Sbjct: 121 RFNHQCEVVSGVMEEECGALLTSFFRELR 149


>gi|260893961|ref|YP_003240058.1| CMP/dCMP deaminase zinc-binding protein [Ammonifex degensii KC4]
 gi|260866102|gb|ACX53208.1| CMP/dCMP deaminase zinc-binding protein [Ammonifex degensii KC4]
          Length = 151

 Score =  119 bits (297), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 62/142 (43%), Positives = 84/142 (59%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  AL EA+ A +R E+PVGAVAVLN +II R  N    LKD TAHAEILA+R   + + 
Sbjct: 1   MREALSEAEKAYVRGEVPVGAVAVLNGEIIGRGHNLRETLKDATAHAEILALREAAKKIG 60

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
              L EV LY TLEPC MCA A+   R++R+ +GA +PK G   +          +H  E
Sbjct: 61  DWRLEEVTLYTTLEPCPMCAGALIQFRVKRVVFGAFDPKAGAAGSVVDLLRDPRFNHQVE 120

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
           +  G+  + S  +++ FF+E R
Sbjct: 121 VVGGVLAEESGALLKRFFQELR 142


>gi|87121678|ref|ZP_01077565.1| cytidine/deoxycytidylate deaminase family protein [Marinomonas sp.
           MED121]
 gi|86162929|gb|EAQ64207.1| cytidine/deoxycytidylate deaminase family protein [Marinomonas sp.
           MED121]
          Length = 162

 Score =  119 bits (297), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 64/142 (45%), Positives = 85/142 (59%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  AL  A  AA   E+PVGA+ VL+N+II    N      D TAHAEI AIR  C+ ++
Sbjct: 1   MERALVLADKAATEGEVPVGAILVLDNEIIGEGYNSPISTCDPTAHAEIQAIRDACKNVA 60

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
              LP+  LYVTLEPC+MCA AI  ARI R+ Y A+ PK G +E+  QF+     +HS +
Sbjct: 61  NYRLPKATLYVTLEPCSMCAGAIVHARIARVVYAATEPKSGVVESQNQFFEQDFLNHSVK 120

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
           +  G+    + Q + DFF+ RR
Sbjct: 121 VEAGVLGPFASQKLSDFFQYRR 142


>gi|184154758|ref|YP_001843098.1| cytosine/adenosine deaminase [Lactobacillus fermentum IFO 3956]
 gi|227514025|ref|ZP_03944074.1| nucleoside deaminase [Lactobacillus fermentum ATCC 14931]
 gi|260663213|ref|ZP_05864105.1| cytosine/adenosine deaminase [Lactobacillus fermentum 28-3-CHN]
 gi|183226102|dbj|BAG26618.1| cytosine/adenosine deaminase [Lactobacillus fermentum IFO 3956]
 gi|227087611|gb|EEI22923.1| nucleoside deaminase [Lactobacillus fermentum ATCC 14931]
 gi|260552405|gb|EEX25456.1| cytosine/adenosine deaminase [Lactobacillus fermentum 28-3-CHN]
          Length = 174

 Score =  119 bits (297), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 55/140 (39%), Positives = 84/140 (60%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  A +EA  AAL  E+P+GAV V   KII R  N   + +D T HAE+LAI   C+ L
Sbjct: 10  YMKEAFKEANQAALLGEVPIGAVVVYKGKIIGRGHNMREKFQDATYHAEVLAIMEACQAL 69

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L E DLYVTLEPC MC+ AI  +RI+R+++ A + K G + +          +H  
Sbjct: 70  GSWRLEECDLYVTLEPCIMCSGAIINSRIKRVFFAAPDEKAGAVSSLYHLLEDTRLNHQV 129

Query: 127 EIYPGISEQRSRQIIQDFFK 146
           E++ G+ ++ + Q++++FF+
Sbjct: 130 EVHQGLMQEEASQMLKEFFR 149


>gi|121533374|ref|ZP_01665202.1| CMP/dCMP deaminase, zinc-binding [Thermosinus carboxydivorans Nor1]
 gi|121307933|gb|EAX48847.1| CMP/dCMP deaminase, zinc-binding [Thermosinus carboxydivorans Nor1]
          Length = 149

 Score =  119 bits (297), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 56/143 (39%), Positives = 87/143 (60%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  ALEEA+ A    E+P+GAV V++  ++++A NR     D TAHAEI+ I+  C++L
Sbjct: 6   YMGIALEEARKAYAIGEVPIGAVLVMDGAVVAKAHNRRETWHDATAHAEIIVIQQACKLL 65

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
            +  L    LYVT+EPC MCA A+  +RI RL YG+++ K G +E+          +H  
Sbjct: 66  GRWRLTGAALYVTIEPCPMCAGALVNSRIDRLVYGSADYKAGAVESLFNIVQHPALNHRL 125

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+  G+      +I++DFF++RR
Sbjct: 126 EVTAGVRADECAEIMRDFFRQRR 148


>gi|332686456|ref|YP_004456230.1| tRNA-specific adenosine-34 deaminase [Melissococcus plutonius ATCC
           35311]
 gi|332370465|dbj|BAK21421.1| tRNA-specific adenosine-34 deaminase [Melissococcus plutonius ATCC
           35311]
          Length = 163

 Score =  118 bits (296), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 65/145 (44%), Positives = 88/145 (60%), Gaps = 4/145 (2%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM+ AL EA+ A    E+P+GAV V   +II+R  N   +++  TAHAEILAI   C  L
Sbjct: 12  FMNEALTEAKKAEKLGEVPIGAVVVYQKQIIARGYNLREKIQKATAHAEILAINEACTFL 71

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC--HH 124
           +   L E  L+VTLEPC+MC+ A+ LARI  +YYGA +PKGG    GT    LA    +H
Sbjct: 72  NSWRLEETRLFVTLEPCSMCSGAMLLARIPEVYYGAKDPKGGAA--GTLINLLADSRFNH 129

Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149
             +   G+ E+   QI+ +FFK+ R
Sbjct: 130 VAKTESGVLEEPCSQILTNFFKQLR 154


>gi|319941641|ref|ZP_08015965.1| cytosine deaminase [Sutterella wadsworthensis 3_1_45B]
 gi|319804871|gb|EFW01725.1| cytosine deaminase [Sutterella wadsworthensis 3_1_45B]
          Length = 328

 Score =  118 bits (296), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 63/143 (44%), Positives = 85/143 (59%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  ALEEAQ A +  EIPVGAV V + K+I+R GN      D TAHAEI+A+R     L
Sbjct: 166 FMRMALEEAQEAGMAGEIPVGAVVVADGKVIARGGNETLRSGDPTAHAEIVALRAAAAAL 225

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
           +   L    LYVTLEPC MCA AI+ AR RR+ YGA + + G +E   + + +   +H P
Sbjct: 226 ANHRLTNTTLYVTLEPCPMCAGAIAEARCRRIVYGAGDSRRGALEGAFRLFDIPGVNHRP 285

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
            +  G+      +++ DFF +RR
Sbjct: 286 LVTGGVLALEGEKLLTDFFAKRR 308


>gi|189501687|ref|YP_001957404.1| hypothetical protein Aasi_0231 [Candidatus Amoebophilus asiaticus
           5a2]
 gi|189497128|gb|ACE05675.1| hypothetical protein Aasi_0231 [Candidatus Amoebophilus asiaticus
           5a2]
          Length = 155

 Score =  118 bits (296), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 63/143 (44%), Positives = 88/143 (61%), Gaps = 5/143 (3%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  AL+EA  A   NEIPVGAV V NN+II++A N+  +LKD TAHAE+LA+      +
Sbjct: 17  FMRIALQEAMKAYEVNEIPVGAVVVSNNRIIAKAHNQVEKLKDATAHAEMLALSSAFSYI 76

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
             + LP+  LYVTLEPC MCA+A   +++ R+ + AS+ + G    GT        H   
Sbjct: 77  GGKYLPDCTLYVTLEPCLMCASATFWSKLSRIVFSASDIRLGYRTFGTN-----VLHPKT 131

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           +I  GI EQ S++++Q FF + R
Sbjct: 132 KIDAGILEQESQKVLQSFFAKLR 154


>gi|312142718|ref|YP_003994164.1| CMP/dCMP deaminase zinc-binding protein [Halanaerobium sp.
           'sapolanicus']
 gi|311903369|gb|ADQ13810.1| CMP/dCMP deaminase zinc-binding protein [Halanaerobium sp.
           'sapolanicus']
          Length = 149

 Score =  118 bits (296), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 56/143 (39%), Positives = 89/143 (62%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  AL EA+ A  R E+P+GAV V +++++ R  N   + +D T+HAEI+A++   +  
Sbjct: 7   YMQMALAEARKAYQRAEVPIGAVVVCDDRVVGRGFNLREQTQDPTSHAEIIALKEAAKEQ 66

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
           +   L +  LYVTLEPC MCA AI  +RI+RL Y A++PK G +++  Q       +H  
Sbjct: 67  ASWRLEDCQLYVTLEPCPMCAGAILQSRIKRLVYAAADPKAGAVKSLYQLLGDDRFNHQV 126

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+  G+ E  + Q+++DFF+E R
Sbjct: 127 EVVSGVMEAEAAQLLKDFFRELR 149


>gi|323344759|ref|ZP_08084983.1| tRNA-specific adenosine deaminase [Prevotella oralis ATCC 33269]
 gi|323094029|gb|EFZ36606.1| tRNA-specific adenosine deaminase [Prevotella oralis ATCC 33269]
          Length = 151

 Score =  118 bits (296), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 66/148 (44%), Positives = 85/148 (57%), Gaps = 5/148 (3%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           +K   FM  AL EA+ A    EIP+GAV V  ++II+RA N    L DVTAHAE+ AI  
Sbjct: 9   QKDEQFMQKALIEAKAAFDAGEIPIGAVIVCKDRIIARAHNLTETLHDVTAHAEMQAITA 68

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
               L  + LPE  LYVT+EPCTMCA AI  A++RR+ YGA++ K      G   Y    
Sbjct: 69  AADALGGKYLPECTLYVTIEPCTMCAGAIGWAQLRRIVYGATDEK-----RGFHKYAPEA 123

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            H    I  GI EQ  R++++ FF  +R
Sbjct: 124 LHPKATITAGILEQECRELMRQFFLSKR 151


>gi|330718918|ref|ZP_08313518.1| cytosine/adenosine deaminase [Leuconostoc fallax KCTC 3537]
          Length = 169

 Score =  118 bits (296), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 64/148 (43%), Positives = 88/148 (59%), Gaps = 6/148 (4%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           N FM  AL+EA+ A    E+P+GAV V +N+II+RA N   + +  TAHAE+LAI    +
Sbjct: 13  NDFMQAALDEARQAGSEGEVPIGAVIVHDNQIIARAHNHREQGQQATAHAELLAIEAANQ 72

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT--- 121
                 L    L+VTLEPC MCA AI  +RI  +YYGA + KGG +++    YTL     
Sbjct: 73  AAQSWRLENTALFVTLEPCMMCAGAIINSRIPVIYYGAQDAKGGAVKS---LYTLLEDER 129

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H  E++PGI      Q++Q+FF E R
Sbjct: 130 LNHRVEVHPGIKSDECGQLLQNFFSEIR 157


>gi|257454187|ref|ZP_05619457.1| tRNA-specific adenosine deaminase [Enhydrobacter aerosaccus SK60]
 gi|257448360|gb|EEV23333.1| tRNA-specific adenosine deaminase [Enhydrobacter aerosaccus SK60]
          Length = 187

 Score =  118 bits (295), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 62/146 (42%), Positives = 86/146 (58%), Gaps = 1/146 (0%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           + FM  AL+ A     R E+PVGAV V    II++  N+     D TAHAEI+AIR  C+
Sbjct: 28  DAFMQAALDVAAEGGERGEVPVGAVIVHQGTIIAKGYNQPILSHDATAHAEIVAIRQACQ 87

Query: 65  ILSQEILP-EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123
                 LP + +L+VTLEPCTMC  AI  AR+ RL + A+ PK G I +   F  +A  +
Sbjct: 88  YFDNYRLPADCELFVTLEPCTMCLGAIIHARVSRLVFAATEPKAGMIVSQQDFSQVAFYN 147

Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149
           H   +  G+  ++SR ++QDFF+ RR
Sbjct: 148 HFLTVKQGVMAEQSRALLQDFFRHRR 173


>gi|83955334|ref|ZP_00963989.1| cytidine and deoxycytidylate deaminase family protein
           [Sulfitobacter sp. NAS-14.1]
 gi|83840327|gb|EAP79501.1| cytidine and deoxycytidylate deaminase family protein
           [Sulfitobacter sp. NAS-14.1]
          Length = 151

 Score =  118 bits (295), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 79/144 (54%), Positives = 103/144 (71%), Gaps = 1/144 (0%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           +MS ALEEA+ AA R E+PVGAV V  + +++++AGNR REL D TAHAE+LAIR  C  
Sbjct: 6   YMSQALEEARAAAARGEVPVGAVIVAPDGQVVAQAGNRTRELNDPTAHAEVLAIRAACAA 65

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
              E L    LYVTLEPC MCAAAIS AR+ RLYYGAS+PK GG+  G + ++ A CHH+
Sbjct: 66  AGSERLGGHALYVTLEPCAMCAAAISAARVARLYYGASDPKSGGVAQGARVFSHAQCHHA 125

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
           P++Y  I+   S Q+++ FF E+R
Sbjct: 126 PDVYDAIAAPESEQLLRAFFAEKR 149


>gi|229159196|ref|ZP_04287222.1| hypothetical protein bcere0009_110 [Bacillus cereus R309803]
 gi|228624277|gb|EEK81077.1| hypothetical protein bcere0009_110 [Bacillus cereus R309803]
          Length = 166

 Score =  118 bits (295), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 61/143 (42%), Positives = 84/143 (58%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  A+EEAQ A    E+P+GAV VL+ ++IS A N     +   AHAE+LAI   C+ L
Sbjct: 9   FMQLAIEEAQKAEEIQEVPIGAVIVLDGEVISSAHNLRETEQRSIAHAELLAIDEACKKL 68

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  LYVTLEPC MCA  I L+R++R+ YGAS+PKGG         T    +H  
Sbjct: 69  GTWRLEDATLYVTLEPCPMCAGGIVLSRVKRVVYGASDPKGGCAGTLMNLLTDERFNHQC 128

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+  G+ E+    ++ +FF+E R
Sbjct: 129 EVVTGVLEEECGTLLTNFFRELR 151


>gi|292670885|ref|ZP_06604311.1| deaminase [Selenomonas noxia ATCC 43541]
 gi|292647506|gb|EFF65478.1| deaminase [Selenomonas noxia ATCC 43541]
          Length = 179

 Score =  118 bits (295), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 63/143 (44%), Positives = 86/143 (60%), Gaps = 1/143 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  ALEEA++A    E+P+GAV +     +I+R  N      D TAHAE++AIR  C+ L
Sbjct: 33  MRMALEEAKHAYALGEVPIGAVIIDKAGTLIARGCNLRETQHDATAHAELIAIRRACKSL 92

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
            +  L E+ LYVT+EPC MCA AI ++RI R+ YG+++ K GG E+     +    +H P
Sbjct: 93  GRWRLTEMTLYVTIEPCPMCAGAIVMSRISRIVYGSTDRKAGGCESLFNITSCPGLNHQP 152

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           EI  GI       II+ FFKERR
Sbjct: 153 EICAGILADECSAIIKKFFKERR 175


>gi|293400048|ref|ZP_06644194.1| cytidine/deoxycytidylate deaminase family protein
           [Erysipelotrichaceae bacterium 5_2_54FAA]
 gi|291306448|gb|EFE47691.1| cytidine/deoxycytidylate deaminase family protein
           [Erysipelotrichaceae bacterium 5_2_54FAA]
          Length = 157

 Score =  118 bits (295), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 59/143 (41%), Positives = 87/143 (60%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  A++EA+ A   +E+P+G V V  NKII+RA N     +   AHAEILAI   C I+
Sbjct: 5   FMLEAIKEAEKAFAIDEVPIGCVIVYQNKIIARAHNLRESKQSAIAHAEILAIEKACNII 64

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  LYVTLEPC MC+ AI  +R++ + +GA +PKGG I++  + Y     +H P
Sbjct: 65  GSWRLEDCTLYVTLEPCPMCSGAIIQSRMKTVVFGAYDPKGGCIKSCMKMYETPGFNHYP 124

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E   GI E+    +++ FF+++R
Sbjct: 125 ETIGGILEEECGALLKQFFRQKR 147


>gi|89892755|ref|YP_516242.1| hypothetical protein DSY0009 [Desulfitobacterium hafniense Y51]
 gi|219666080|ref|YP_002456515.1| CMP/dCMP deaminase zinc-binding [Desulfitobacterium hafniense
           DCB-2]
 gi|89332203|dbj|BAE81798.1| hypothetical protein [Desulfitobacterium hafniense Y51]
 gi|219536340|gb|ACL18079.1| CMP/dCMP deaminase zinc-binding [Desulfitobacterium hafniense
           DCB-2]
          Length = 148

 Score =  118 bits (295), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 60/143 (41%), Positives = 89/143 (62%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  ALEEA+ A  + E+P+GAV V   +II+RA N     +D TAHAE+LA++   + L
Sbjct: 6   YMRLALEEAEIAFAQGEVPIGAVVVHKGEIIARAHNEKELRQDPTAHAEVLAVQRATQAL 65

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L E  LYVTLEPC MCA ++  AR++ L +GA++ KGG + + T    +   +H  
Sbjct: 66  GIWRLSEATLYVTLEPCPMCAGSLVQARLKTLVFGAADLKGGAVGSVTNVLDVNRWNHRV 125

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+  GI E+   QI++DFF++ R
Sbjct: 126 EVVAGILEEECAQILKDFFRKLR 148


>gi|86140825|ref|ZP_01059384.1| putative cytosine/adenosine deaminase [Leeuwenhoekiella blandensis
           MED217]
 gi|85832767|gb|EAQ51216.1| putative cytosine/adenosine deaminase [Leeuwenhoekiella blandensis
           MED217]
          Length = 151

 Score =  118 bits (295), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 63/145 (43%), Positives = 86/145 (59%), Gaps = 6/145 (4%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           + FM  AL+EA+ A    EIPVGAV  +NN+II+RA N    L DVTAHAE+ AI     
Sbjct: 10  HYFMKKALQEAETAFELGEIPVGAVVTVNNRIIARAHNLTERLHDVTAHAEMQAITAAAN 69

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
            L  + L +  LYVTLEPC MCA A+  ++I R+ +GA++   G  + GTQ       H 
Sbjct: 70  FLGGKYLTDSTLYVTLEPCQMCAGALYWSQISRIVFGAADTTRGYQKMGTQL------HP 123

Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149
             ++  GI E  + Q+++ FF ERR
Sbjct: 124 KTQVTSGIMETEAAQLLKRFFIERR 148


>gi|227545162|ref|ZP_03975211.1| tRNA-adenosine deaminase [Lactobacillus reuteri CF48-3A]
 gi|300909163|ref|ZP_07126624.1| tRNA-specific adenosine deaminase [Lactobacillus reuteri SD2112]
 gi|227184845|gb|EEI64916.1| tRNA-adenosine deaminase [Lactobacillus reuteri CF48-3A]
 gi|300893028|gb|EFK86387.1| tRNA-specific adenosine deaminase [Lactobacillus reuteri SD2112]
          Length = 170

 Score =  118 bits (295), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 55/139 (39%), Positives = 84/139 (60%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  A+ EA+ A + +E+P+GA+ V   ++I R  N   + +DVT HAE+LAI   C  L
Sbjct: 14  FMKMAIAEAKQARILDEVPIGAIVVHEGQVIGRGHNMREKFQDVTYHAEMLAIMEACTNL 73

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L + DLYVTLEPC MC+ AI  ARI+ +YYGA++PK G +++       +  +H  
Sbjct: 74  GSWRLEDCDLYVTLEPCIMCSGAIINARIKNVYYGAADPKAGAVDSLYHLLNDSRLNHQV 133

Query: 127 EIYPGISEQRSRQIIQDFF 145
            ++ GI      Q++++FF
Sbjct: 134 NVHSGILGDECSQMLKNFF 152


>gi|229015424|ref|ZP_04172427.1| hypothetical protein bcere0030_220 [Bacillus cereus AH1273]
 gi|229021629|ref|ZP_04178217.1| hypothetical protein bcere0029_110 [Bacillus cereus AH1272]
 gi|228739675|gb|EEL90083.1| hypothetical protein bcere0029_110 [Bacillus cereus AH1272]
 gi|228745866|gb|EEL95865.1| hypothetical protein bcere0030_220 [Bacillus cereus AH1273]
          Length = 164

 Score =  117 bits (294), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 61/149 (40%), Positives = 87/149 (58%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M +   FM  A+EEA+ A    E+P+GAV VL++++IS A N     +   AHAE+LAI 
Sbjct: 1   MDRDIYFMQLAIEEAKKAEAIQEVPIGAVIVLDDEVISVAHNLRETEQRSIAHAELLAID 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
             C+ L    L +  LYVTLEPC MCA  I L+R++R+ YGAS+PKGG         T  
Sbjct: 61  EACKKLGTWRLEDATLYVTLEPCPMCAGGIVLSRVKRVVYGASDPKGGCAGTLMNLLTDE 120

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  E+  G+ E+    ++ +FF+E R
Sbjct: 121 RFNHQCEVVAGVLEEECGTLLTNFFRELR 149


>gi|333029805|ref|ZP_08457866.1| CMP/dCMP deaminase zinc-binding [Bacteroides coprosuis DSM 18011]
 gi|332740402|gb|EGJ70884.1| CMP/dCMP deaminase zinc-binding [Bacteroides coprosuis DSM 18011]
          Length = 145

 Score =  117 bits (294), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 61/143 (42%), Positives = 85/143 (59%), Gaps = 5/143 (3%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  AL+EA++A    EIPVGAV V + ++I+RA N    L DVTAHAE+ AI M   +L
Sbjct: 8   FMKMALQEAESAMKMGEIPVGAVVVSHGQVIARAHNMTERLTDVTAHAEMQAITMAADLL 67

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
             + L +  LYVTLEPC MCA AIS A++ +L  GA++ K      G +       H   
Sbjct: 68  GGKYLSDCTLYVTLEPCVMCAGAISWAQLGKLVIGANDSK-----RGYKLLAPDVLHPKT 122

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+  G+   +S +++Q FF+ RR
Sbjct: 123 EVIEGVLADKSTEMLQSFFRARR 145


>gi|89889508|ref|ZP_01201019.1| cytosine/adenosine deaminase [Flavobacteria bacterium BBFL7]
 gi|89517781|gb|EAS20437.1| cytosine/adenosine deaminase [Flavobacteria bacterium BBFL7]
          Length = 149

 Score =  117 bits (294), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 64/143 (44%), Positives = 82/143 (57%), Gaps = 6/143 (4%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  AL+EAQ A  R EIPVGAV V  N+II++  N    L DVTAHAE+ AI  G   L
Sbjct: 10  FMKKALQEAQTALDRGEIPVGAVIVTQNRIIAKGHNLTETLTDVTAHAEMQAITAGASFL 69

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
             + L +  LYVTLEPC MCA A+  ++I  + YGA +   G ++ GTQ       H   
Sbjct: 70  GGKYLKDCTLYVTLEPCQMCAGALYWSQISNIVYGARDEHRGYLKMGTQL------HPKT 123

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           ++  GI E+    II +FF  RR
Sbjct: 124 KVVSGILEEECSAIINEFFTRRR 146


>gi|85857921|ref|YP_460123.1| tRNA-specific adenosine deaminase [Syntrophus aciditrophicus SB]
 gi|85721012|gb|ABC75955.1| tRNA-specific adenosine deaminase [Syntrophus aciditrophicus SB]
          Length = 187

 Score =  117 bits (294), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 61/143 (42%), Positives = 88/143 (61%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  ALEEA+ AA   E+P+GAV V  N++I+R+ N   +  D TAHAEILAIR     +
Sbjct: 31  WMRLALEEARLAASEGEVPIGAVIVRENEVIARSHNMPVDRHDPTAHAEILAIREAAEKM 90

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L  + LYVTLEPC MCA AI  AR++RL YG  +PKGG +++  +    +  +H  
Sbjct: 91  KNYRLTGMTLYVTLEPCIMCAGAILQARLKRLVYGTGDPKGGAVDSLYRLLQDSRLNHFV 150

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+  G+ +    +I+  FF+E+R
Sbjct: 151 EVTGGVLQASCAEILSGFFREKR 173


>gi|288926032|ref|ZP_06419961.1| cytidine/deoxycytidylate deaminase family protein [Prevotella
           buccae D17]
 gi|288337252|gb|EFC75609.1| cytidine/deoxycytidylate deaminase family protein [Prevotella
           buccae D17]
          Length = 147

 Score =  117 bits (294), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 62/143 (43%), Positives = 85/143 (59%), Gaps = 5/143 (3%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  AL+EA+ A  + EIP+GAV V   +IISRA N    L DVTAHAE+ AI     +L
Sbjct: 10  YMRKALQEAEAACQKGEIPIGAVVVCKGRIISRAHNLTETLHDVTAHAEMQAITAAADLL 69

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
             + L +  LYVT+EPCTMCA AI  A++ R+ YGA + K      G + Y     H   
Sbjct: 70  GGKYLTDCTLYVTVEPCTMCAGAIGWAQVPRIVYGAPDEK-----RGYRHYAPHAMHPKA 124

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           +I  GI E   R+++Q FF+++R
Sbjct: 125 DIVGGILEDECRELMQKFFRDKR 147


>gi|163733416|ref|ZP_02140859.1| cytidine and deoxycytidylate deaminase family protein [Roseobacter
           litoralis Och 149]
 gi|161393204|gb|EDQ17530.1| cytidine and deoxycytidylate deaminase family protein [Roseobacter
           litoralis Och 149]
          Length = 149

 Score =  117 bits (294), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 69/130 (53%), Positives = 88/130 (67%), Gaps = 1/130 (0%)

Query: 21  RNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVT 79
           R E+PVGAV V  +  II+ AGN+ R   D TAHAE+LAIR  C +L  E L +  LYVT
Sbjct: 20  RGEVPVGAVVVDPDGLIIAAAGNQTRADLDPTAHAEMLAIRRACAVLGTERLIDHALYVT 79

Query: 80  LEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139
           LEPC MCAAAIS ARI RLYYGA +PK GG+  G + ++   CHH+PE++ GI+   S  
Sbjct: 80  LEPCAMCAAAISAARISRLYYGAGDPKSGGVAQGARVFSHPQCHHAPEVFDGIAAAESEA 139

Query: 140 IIQDFFKERR 149
           +++ FF  RR
Sbjct: 140 MLKGFFTARR 149


>gi|229027869|ref|ZP_04184026.1| Uncharacterized deaminase yaaJ [Bacillus cereus AH1271]
 gi|228733445|gb|EEL84270.1| Uncharacterized deaminase yaaJ [Bacillus cereus AH1271]
          Length = 166

 Score =  117 bits (294), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 61/143 (42%), Positives = 84/143 (58%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  A+EEA+ A    E+P+GAV VLN ++IS A N     +   AHAE+LAI   C+ L
Sbjct: 9   FMQLAIEEAKKAEAIQEVPIGAVIVLNGEVISVAHNLRETEQRSIAHAELLAIDEACKKL 68

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  LYVTLEPC MCA  I L+R++R+ YGAS+PKGG         T    +H  
Sbjct: 69  GTWRLEDATLYVTLEPCPMCAGGIVLSRVKRVVYGASDPKGGCAGTLMNLLTDERFNHQC 128

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+  G+ E+    ++ +FF+E R
Sbjct: 129 EVVAGVLEKECGTLLTNFFRELR 151


>gi|206978348|ref|ZP_03239222.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein
           [Bacillus cereus H3081.97]
 gi|217957598|ref|YP_002336140.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein
           [Bacillus cereus AH187]
 gi|222093791|ref|YP_002527839.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein
           [Bacillus cereus Q1]
 gi|228983277|ref|ZP_04143492.1| Uncharacterized deaminase yaaJ [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
 gi|229136865|ref|ZP_04265494.1| Uncharacterized deaminase yaaJ [Bacillus cereus BDRD-ST26]
 gi|229153801|ref|ZP_04281933.1| Uncharacterized deaminase yaaJ [Bacillus cereus ATCC 4342]
 gi|206743440|gb|EDZ54873.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein
           [Bacillus cereus H3081.97]
 gi|217065488|gb|ACJ79738.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein
           [Bacillus cereus AH187]
 gi|221237837|gb|ACM10547.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein
           [Bacillus cereus Q1]
 gi|228629670|gb|EEK86365.1| Uncharacterized deaminase yaaJ [Bacillus cereus ATCC 4342]
 gi|228646600|gb|EEL02805.1| Uncharacterized deaminase yaaJ [Bacillus cereus BDRD-ST26]
 gi|228776457|gb|EEM24808.1| Uncharacterized deaminase yaaJ [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
          Length = 166

 Score =  117 bits (293), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 61/143 (42%), Positives = 84/143 (58%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  A+EEA+ A    E+P+GAV VLN ++IS A N     +   AHAE+LAI   C+ L
Sbjct: 9   FMQLAIEEAKKAEAIQEVPIGAVIVLNGEVISVAHNLRETEQRSIAHAELLAIDEACKKL 68

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  LYVTLEPC MCA  I L+R++R+ YGAS+PKGG         T    +H  
Sbjct: 69  GTWRLEDATLYVTLEPCPMCAGGIVLSRVKRVVYGASDPKGGCAGTLMNLLTDERFNHQC 128

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+  G+ E+    ++ +FF+E R
Sbjct: 129 EVVAGVLEEECGTLLTNFFRELR 151


>gi|299542082|ref|ZP_07052398.1| hypothetical protein BFZC1_24048 [Lysinibacillus fusiformis ZC1]
 gi|298725397|gb|EFI66045.1| hypothetical protein BFZC1_24048 [Lysinibacillus fusiformis ZC1]
          Length = 171

 Score =  117 bits (293), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 61/144 (42%), Positives = 84/144 (58%)

Query: 6   VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           +FM  ALEEAQ AAL  E+P+GAV V   KII+RA N     ++ T HAE+L I+  C+ 
Sbjct: 9   LFMKQALEEAQQAALLGEVPIGAVLVYEGKIIARAHNLRETTQNATTHAELLVIQEACKK 68

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           +    L +  LYVTLEPC MCA AI  +R+ R+ YGA + K G +++          +H 
Sbjct: 69  IGSWRLEDTTLYVTLEPCPMCAGAILQSRVPRVVYGARDQKAGCVDSLYHLLNDERFNHD 128

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
            ++  GI  +   QI+ DFFK  R
Sbjct: 129 CDVTEGILAEECGQILTDFFKALR 152


>gi|329889978|ref|ZP_08268321.1| tRNA-specific adenosine deaminase [Brevundimonas diminuta ATCC
           11568]
 gi|328845279|gb|EGF94843.1| tRNA-specific adenosine deaminase [Brevundimonas diminuta ATCC
           11568]
          Length = 154

 Score =  117 bits (292), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 61/141 (43%), Positives = 85/141 (60%), Gaps = 2/141 (1%)

Query: 11  ALEEAQNAALRNEIPVGAVAVLNN--KIISRAGNRNRELKDVTAHAEILAIRMGCRILSQ 68
           AL+ AQ AA   E+PVGAV V  N  +++ R  N      D +AHAEI+A+R     L  
Sbjct: 2   ALDLAQAAAEAGEVPVGAVIVDENTGEVLGRGQNGPITAHDPSAHAEIVALRDAAAKLQN 61

Query: 69  EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEI 128
             L ++ LYVTLEPC MCA AIS ARI R+ +GA +PKGG + +G +F+   TCH  P  
Sbjct: 62  YRLTDLTLYVTLEPCAMCAGAISHARIGRVVWGADDPKGGAVLHGGRFFDQPTCHWRPRT 121

Query: 129 YPGISEQRSRQIIQDFFKERR 149
             G+    + ++++ FF+ RR
Sbjct: 122 ESGVMADPAAEMLRSFFRSRR 142


>gi|225011298|ref|ZP_03701754.1| CMP/dCMP deaminase zinc-binding [Flavobacteria bacterium MS024-3C]
 gi|225004554|gb|EEG42520.1| CMP/dCMP deaminase zinc-binding [Flavobacteria bacterium MS024-3C]
          Length = 166

 Score =  117 bits (292), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 61/152 (40%), Positives = 88/152 (57%), Gaps = 9/152 (5%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  AL EA +A  + E+PVGA+ V N++II+R  N   +L DVTAHAE+ AI      L
Sbjct: 15  FMKLALAEAAHAFEKGEVPVGALVVANDRIIARGHNLTEQLTDVTAHAEMQAITAAAHHL 74

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF---------Y 117
             + L    LYVTLEPC MCA A+  ++I ++ YGAS+PK GG+   +Q          +
Sbjct: 75  GGKYLHNCTLYVTLEPCLMCAGALYWSQISKVVYGASDPKRGGLSVYSQHQASLSVPQSH 134

Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +  H   E+  G+    + Q++QDFF ++R
Sbjct: 135 PPSPLHPKTEVIGGVMATEATQLLQDFFAKKR 166


>gi|315606353|ref|ZP_07881369.1| tRNA-specific adenosine deaminase [Prevotella buccae ATCC 33574]
 gi|315252044|gb|EFU32017.1| tRNA-specific adenosine deaminase [Prevotella buccae ATCC 33574]
          Length = 147

 Score =  117 bits (292), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 62/143 (43%), Positives = 85/143 (59%), Gaps = 5/143 (3%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  AL+EA+ A  + EIP+GAV V   +IISRA N    L DVTAHAE+ AI     +L
Sbjct: 10  YMRKALQEAEAACQKGEIPIGAVVVCKGRIISRAHNLTETLHDVTAHAEMQAITAAADLL 69

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
             + L +  LYVT+EPCTMCA AI  A++ R+ YGA + K      G + Y     H   
Sbjct: 70  GGKYLTDCTLYVTVEPCTMCAGAIGWAQVPRIVYGAPDEK-----RGYRHYAPHAMHPRA 124

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           +I  GI E   R+++Q FF+++R
Sbjct: 125 DIVGGILEDECRELMQKFFRDKR 147


>gi|254293360|ref|YP_003059383.1| CMP/dCMP deaminase zinc-binding [Hirschia baltica ATCC 49814]
 gi|254041891|gb|ACT58686.1| CMP/dCMP deaminase zinc-binding [Hirschia baltica ATCC 49814]
          Length = 154

 Score =  117 bits (292), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 62/146 (42%), Positives = 89/146 (60%), Gaps = 3/146 (2%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           +M+ A++ A+ AAL  E+PVGAV V      I+    N      D TAHAEI+AIR  C 
Sbjct: 9   YMARAMQLAEEAALAGEVPVGAVIVDPSTGNIVGEGRNGPIGAHDPTAHAEIVAIRNACA 68

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
            +    LP+++LYVTLEPC MCA AIS ARI ++ + A +PKGG I++G +F+  +TCH 
Sbjct: 69  SVDNYRLPDLELYVTLEPCAMCAGAISFARIGKVVFAADDPKGGAIKHGPKFFEQSTCHW 128

Query: 125 SPEIYPGIS-EQRSRQIIQDFFKERR 149
             +    I     + ++++ FFK RR
Sbjct: 129 RSQWEQDIRFASEAGEMLRAFFKSRR 154


>gi|323701686|ref|ZP_08113358.1| CMP/dCMP deaminase zinc-binding protein [Desulfotomaculum
           nigrificans DSM 574]
 gi|323533459|gb|EGB23326.1| CMP/dCMP deaminase zinc-binding protein [Desulfotomaculum
           nigrificans DSM 574]
          Length = 144

 Score =  117 bits (292), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 62/142 (43%), Positives = 80/142 (56%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  AL EAQ AA + E+P+GAV V    I+ R  +    L D +AHAEILA+R   + L 
Sbjct: 1   MREALVEAQKAAEKGEVPIGAVVVAEGAIVGRGHDLRESLCDASAHAEILAMREAAKQLG 60

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
              L    LYVT+EPC MCA AI   R+RRL YGA NPK G +++          +H  E
Sbjct: 61  DWRLNHATLYVTVEPCAMCAGAIVQFRVRRLVYGAPNPKAGSVDSILDIVHQPRFNHRVE 120

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
           +  GI E   R +IQ+FF+  R
Sbjct: 121 VISGIMEDECRAVIQNFFRSLR 142


>gi|125624632|ref|YP_001033115.1| hypothetical protein llmg_1843 [Lactococcus lactis subsp. cremoris
           MG1363]
 gi|124493440|emb|CAL98414.1| conserved hypothetical protein [Lactococcus lactis subsp. cremoris
           MG1363]
 gi|300071423|gb|ADJ60823.1| hypothetical protein LLNZ_09485 [Lactococcus lactis subsp. cremoris
           NZ9000]
          Length = 155

 Score =  116 bits (291), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 66/144 (45%), Positives = 89/144 (61%), Gaps = 2/144 (1%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKD-VTAHAEILAIRMGCRI 65
           FM+ AL+EAQ AA   E+P+G V V + +II+R  NR REL    T HAE+ AI    + 
Sbjct: 11  FMTEALKEAQKAAENEEVPIGVVIVKDGEIIARDFNR-RELDGRATHHAEVCAIEAANQA 69

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           +    L +  L+VT+EPC MCA AI LARI ++Y+GA+NPK GG  +  Q       +H 
Sbjct: 70  VGNWRLLDCALFVTIEPCVMCAGAIGLARIPQVYFGATNPKFGGTVSLYQILEDKRLNHR 129

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
            ++  GI E  S +I+QDFFK RR
Sbjct: 130 VQVESGILEYESAKIMQDFFKNRR 153


>gi|86134359|ref|ZP_01052941.1| cytidine and deoxycytidylate deaminase [Polaribacter sp. MED152]
 gi|85821222|gb|EAQ42369.1| cytidine and deoxycytidylate deaminase [Polaribacter sp. MED152]
          Length = 149

 Score =  116 bits (291), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 64/143 (44%), Positives = 84/143 (58%), Gaps = 6/143 (4%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  A +EA+ A  + EIPVGAV VLNN+II+RA N    L DVTAHAE+ A       L
Sbjct: 10  FMKKAYQEAEIAFDKGEIPVGAVIVLNNQIIARAHNLTETLNDVTAHAEMQAFTAAANFL 69

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
             + L +  LYVTLEPC MCA A   ++I+R+ YGAS PK G +  GTQ       H   
Sbjct: 70  GGKYLKDCILYVTLEPCQMCAGASYWSQIQRIVYGASEPKRGFVNLGTQL------HPKT 123

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           ++  G+ E     +++ FF E+R
Sbjct: 124 KVTSGVLENDCSLLLKRFFIEKR 146


>gi|229188306|ref|ZP_04315357.1| Uncharacterized deaminase yaaJ [Bacillus cereus ATCC 10876]
 gi|228595174|gb|EEK52942.1| Uncharacterized deaminase yaaJ [Bacillus cereus ATCC 10876]
          Length = 166

 Score =  116 bits (291), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 61/143 (42%), Positives = 83/143 (58%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  A+EEA+ A    E+P+GAV VLN ++IS A N     +   AHAE+LAI   C+ L
Sbjct: 9   FMQLAIEEAKKAEEIQEVPIGAVIVLNGEVISVAHNLRETEQRSIAHAELLAIDEACKKL 68

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  LYVTLEPC MCA  I L+R++R+ YGAS+PKGG         T    +H  
Sbjct: 69  GTWRLEDATLYVTLEPCPMCAGGIVLSRVKRVVYGASDPKGGCAGTLMNLLTDERFNHQC 128

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+  G+ E+    ++  FF+E R
Sbjct: 129 EVVSGVLEEECGTLLTSFFRELR 151


>gi|296123852|ref|YP_003631630.1| CMP/dCMP deaminase zinc-binding protein [Planctomyces limnophilus
           DSM 3776]
 gi|296016192|gb|ADG69431.1| CMP/dCMP deaminase zinc-binding protein [Planctomyces limnophilus
           DSM 3776]
          Length = 166

 Score =  116 bits (291), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 60/149 (40%), Positives = 88/149 (59%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           ++  + +M  AL+ AQ A    E+P+GAV V +++II  A N+  +LKD TAHAEI+AI 
Sbjct: 13  LQPHDRWMRQALDLAQQAFAEEEVPIGAVIVKDDQIIGAAWNQREQLKDPTAHAEIVAIT 72

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
               ++    L +  LYVTLEPC MCA AI  ARI R+ YG ++PK G      Q    A
Sbjct: 73  QAAEVIGDWRLEDCTLYVTLEPCPMCAGAIVQARIPRVVYGITDPKAGACHTLYQITDDA 132

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H   +  G+  Q  ++I+Q+FF+ +R
Sbjct: 133 RLNHRCAVLGGVLAQECKEILQEFFRLQR 161


>gi|29840517|ref|NP_829623.1| cytidine/deoxycytidylate deaminase family protein [Chlamydophila
           caviae GPIC]
 gi|29834866|gb|AAP05501.1| cytidine/deoxycytidylate deaminase family protein [Chlamydophila
           caviae GPIC]
          Length = 157

 Score =  116 bits (291), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 62/149 (41%), Positives = 88/149 (59%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           ++K   FM+ AL+EA+ A  ++E+PVG V V +NKII+R  N   + +D TAHAEIL I 
Sbjct: 3   IEKDIFFMNQALKEARQAYDQDEVPVGCVIVKDNKIIARGHNTTEKFQDPTAHAEILCIG 62

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              + L    L +  LY TLEPC MCA AI LARIRR+ + A + + G   +    +T  
Sbjct: 63  AAAQYLENWRLVDTVLYCTLEPCLMCAGAIQLARIRRIVWAAPDLRLGAGGSWINVFTAK 122

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
              H  E + GI  + S Q+++ FF E+R
Sbjct: 123 HPFHQVECFSGICREESEQLMKQFFIEKR 151


>gi|332880818|ref|ZP_08448489.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Capnocytophaga sp. oral taxon 329 str. F0087]
 gi|332681201|gb|EGJ54127.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Capnocytophaga sp. oral taxon 329 str. F0087]
          Length = 144

 Score =  116 bits (291), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 62/149 (41%), Positives = 84/149 (56%), Gaps = 5/149 (3%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M     +M  ALEEA+ A   +EIPVGAV V  ++I++RA N    L DVTAHAE+  I 
Sbjct: 1   MATDAFYMKKALEEARRAYEEDEIPVGAVVVCGDRILARAHNLTETLTDVTAHAEMQVIT 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
                L  + L E  LYVTLEPC MCA AI  A+++RL YGA++ K      G + +   
Sbjct: 61  AAANALGGKYLNECTLYVTLEPCVMCAGAIGWAQVKRLVYGATDEK-----RGYRMFAPQ 115

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             H   E+  G+    S  +++DFFK +R
Sbjct: 116 AIHPRTEVVSGVMADESMALLKDFFKGKR 144


>gi|218895158|ref|YP_002443569.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein
           [Bacillus cereus G9842]
 gi|218541226|gb|ACK93620.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein
           [Bacillus cereus G9842]
          Length = 166

 Score =  116 bits (291), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 60/143 (41%), Positives = 84/143 (58%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  A+EEA+ A    E+P+GAV VL+ ++IS A N     +   AHAE+LAI   C+ L
Sbjct: 9   FMQLAIEEAKKAEEMQEVPIGAVIVLDGEVISVAHNLRETEQRSIAHAELLAIDEACKKL 68

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  LYVTLEPC MCA  I L+R++R+ YGAS+PKGG         T    +H  
Sbjct: 69  GTWRLEDATLYVTLEPCPMCAGGIVLSRVKRVVYGASDPKGGCAGTLMNLLTDERFNHQC 128

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+  G+ E+    ++ +FF+E R
Sbjct: 129 EVVTGVLEEECGTLLTNFFRELR 151


>gi|213962212|ref|ZP_03390476.1| cytidine/deoxycytidylate deaminase family protein [Capnocytophaga
           sputigena Capno]
 gi|213955218|gb|EEB66536.1| cytidine/deoxycytidylate deaminase family protein [Capnocytophaga
           sputigena Capno]
          Length = 144

 Score =  116 bits (290), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 59/149 (39%), Positives = 86/149 (57%), Gaps = 6/149 (4%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M     FM  ALEEAQ A   +EIPVGA+  ++N+II++A N    LKDVTAHAE+ AI 
Sbjct: 1   MNTDEYFMQKALEEAQIAFEEDEIPVGAIITIDNRIIAKAHNLTERLKDVTAHAEMQAIT 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
           M    L  + L +  +Y+TLEPC MCA A+  +++ RL Y A +P  G    G +     
Sbjct: 61  MAAHYLGGKYLTDCTMYITLEPCAMCAGALYWSQLSRLVYAADDPHRGFKAMGGKL---- 116

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             H   E+  GI  + +  +++ FF+++R
Sbjct: 117 --HPKTEVVMGILSEEATTLLKQFFQQKR 143


>gi|118586639|ref|ZP_01544079.1| cytidine/deoxycytidylate deaminase [Oenococcus oeni ATCC BAA-1163]
 gi|118432954|gb|EAV39680.1| cytidine/deoxycytidylate deaminase [Oenococcus oeni ATCC BAA-1163]
          Length = 156

 Score =  116 bits (290), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 58/143 (40%), Positives = 86/143 (60%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  AL++AQ A    E+P+GAV V +N++I+   NR  +    TAHAE L I    R L
Sbjct: 11  FMQLALKQAQTAFDEGEVPIGAVLVKDNQVIAADHNRKEQSGIATAHAEKLVIEGANRSL 70

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  L+VT+EPC MC  AI  +RI RL+YGA++PK GG+ +       +  +H  
Sbjct: 71  GDWRLNDCSLFVTIEPCVMCCGAIIQSRIPRLFYGAADPKFGGVSSLYHLLEDSRSNHFV 130

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+YP +  ++S  ++QDFF++ R
Sbjct: 131 EVYPDVLAKQSADLMQDFFRKLR 153


>gi|52145192|ref|YP_081636.1| cytidine/deoxycytidylate deaminase family protein [Bacillus cereus
           E33L]
 gi|51978661|gb|AAU20211.1| probable cytidine/deoxycytidylate deaminase family protein
           [Bacillus cereus E33L]
          Length = 166

 Score =  116 bits (290), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 60/143 (41%), Positives = 83/143 (58%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  A+EEA+ A    E+P+GAV VLN ++IS A N     +   AHAE+LAI   C+ L
Sbjct: 9   FMQLAIEEAKKAEAIQEVPIGAVIVLNGEVISAAHNLRETEQRSIAHAELLAIDEACKKL 68

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  LYVTLEPC MCA  I L+R++R+ YGA +PKGG         T    +H  
Sbjct: 69  GTWRLEDATLYVTLEPCPMCAGGIVLSRVKRVVYGAGDPKGGCAGTLMNLLTDERFNHQC 128

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+  G+ E+    ++ +FF+E R
Sbjct: 129 EVVDGVLEEECGTLLTNFFRELR 151


>gi|320527136|ref|ZP_08028323.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Solobacterium moorei F0204]
 gi|320132464|gb|EFW25007.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Solobacterium moorei F0204]
          Length = 164

 Score =  116 bits (290), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 57/145 (39%), Positives = 83/145 (57%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           MK    +M  ALEEA+ A   +E+PVG V V + ++ISR  N   +L    AHAE++AI+
Sbjct: 1   MKTHEEYMELALEEARKAEEIDEVPVGCVIVCDGEVISRGHNLKEQLNQAYAHAEMMAIQ 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
               +     L + DLYVTLEPC MC   I+L+RIR +YYG  +PKGG +E       + 
Sbjct: 61  KAAEVKGNWCLNDCDLYVTLEPCMMCTGIINLSRIRTVYYGTQDPKGGCLETVIDLKKIN 120

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFF 145
             +H P I   I ++   +I+ ++F
Sbjct: 121 RLNHYPNIVGNILQKECSEILTNYF 145


>gi|30260212|ref|NP_842589.1| cytidine/deoxycytidylate deaminase zinc-binding domain-containing
           protein [Bacillus anthracis str. Ames]
 gi|47525273|ref|YP_016622.1| cytidine/deoxycytidylate deaminase zinc-binding domain-containing
           protein [Bacillus anthracis str. 'Ames Ancestor']
 gi|49183056|ref|YP_026308.1| cytidine/deoxycytidylate deaminase zinc-binding domain-containing
           protein [Bacillus anthracis str. Sterne]
 gi|49481561|ref|YP_034377.1| cytidine/deoxycytidylate deaminase family protein [Bacillus
           thuringiensis serovar konkukian str. 97-27]
 gi|65317484|ref|ZP_00390443.1| COG0590: Cytosine/adenosine deaminases [Bacillus anthracis str.
           A2012]
 gi|118475795|ref|YP_892946.1| tRNA-adenosine deaminase [Bacillus thuringiensis str. Al Hakam]
 gi|165873229|ref|ZP_02217840.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein
           [Bacillus anthracis str. A0488]
 gi|167635069|ref|ZP_02393386.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein
           [Bacillus anthracis str. A0442]
 gi|167642053|ref|ZP_02400280.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein
           [Bacillus anthracis str. A0193]
 gi|170688894|ref|ZP_02880096.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein
           [Bacillus anthracis str. A0465]
 gi|170707544|ref|ZP_02897997.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein
           [Bacillus anthracis str. A0389]
 gi|177655687|ref|ZP_02937012.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein
           [Bacillus anthracis str. A0174]
 gi|190569336|ref|ZP_03022228.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein
           [Bacillus anthracis Tsiankovskii-I]
 gi|196036359|ref|ZP_03103756.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein
           [Bacillus cereus W]
 gi|196041943|ref|ZP_03109230.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein
           [Bacillus cereus NVH0597-99]
 gi|196047685|ref|ZP_03114889.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein
           [Bacillus cereus 03BB108]
 gi|218901223|ref|YP_002449057.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein
           [Bacillus cereus AH820]
 gi|225862074|ref|YP_002747452.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein
           [Bacillus cereus 03BB102]
 gi|227812695|ref|YP_002812704.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein
           [Bacillus anthracis str. CDC 684]
 gi|228912760|ref|ZP_04076409.1| Uncharacterized deaminase yaaJ [Bacillus thuringiensis serovar
           pulsiensis BGSC 4CC1]
 gi|228925275|ref|ZP_04088373.1| Uncharacterized deaminase yaaJ [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|228931524|ref|ZP_04094432.1| Uncharacterized deaminase yaaJ [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228943828|ref|ZP_04106215.1| Uncharacterized deaminase yaaJ [Bacillus thuringiensis serovar
           monterrey BGSC 4AJ1]
 gi|229089154|ref|ZP_04220437.1| Uncharacterized deaminase yaaJ [Bacillus cereus Rock3-42]
 gi|229119684|ref|ZP_04248947.1| Uncharacterized deaminase yaaJ [Bacillus cereus 95/8201]
 gi|229182416|ref|ZP_04309669.1| Uncharacterized deaminase yaaJ [Bacillus cereus BGSC 6E1]
 gi|229604522|ref|YP_002864673.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein
           [Bacillus anthracis str. A0248]
 gi|254686610|ref|ZP_05150469.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein
           [Bacillus anthracis str. CNEVA-9066]
 gi|254724163|ref|ZP_05185948.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein
           [Bacillus anthracis str. A1055]
 gi|254737002|ref|ZP_05194707.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein
           [Bacillus anthracis str. Western North America USA6153]
 gi|254744200|ref|ZP_05201881.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein
           [Bacillus anthracis str. Kruger B]
 gi|254751191|ref|ZP_05203230.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein
           [Bacillus anthracis str. Vollum]
 gi|254761661|ref|ZP_05213679.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein
           [Bacillus anthracis str. Australia 94]
 gi|30253533|gb|AAP24075.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein
           [Bacillus anthracis str. Ames]
 gi|47500421|gb|AAT29097.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein
           [Bacillus anthracis str. 'Ames Ancestor']
 gi|49176983|gb|AAT52359.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein
           [Bacillus anthracis str. Sterne]
 gi|49333117|gb|AAT63763.1| probable cytidine/deoxycytidylate deaminase family protein
           [Bacillus thuringiensis serovar konkukian str. 97-27]
 gi|118415020|gb|ABK83439.1| tRNA-adenosine deaminase [Bacillus thuringiensis str. Al Hakam]
 gi|164711027|gb|EDR16593.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein
           [Bacillus anthracis str. A0488]
 gi|167509987|gb|EDR85406.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein
           [Bacillus anthracis str. A0193]
 gi|167529543|gb|EDR92293.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein
           [Bacillus anthracis str. A0442]
 gi|170127540|gb|EDS96414.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein
           [Bacillus anthracis str. A0389]
 gi|170667118|gb|EDT17879.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein
           [Bacillus anthracis str. A0465]
 gi|172080027|gb|EDT65127.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein
           [Bacillus anthracis str. A0174]
 gi|190559558|gb|EDV13551.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein
           [Bacillus anthracis Tsiankovskii-I]
 gi|195990989|gb|EDX54960.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein
           [Bacillus cereus W]
 gi|196021470|gb|EDX60173.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein
           [Bacillus cereus 03BB108]
 gi|196027198|gb|EDX65818.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein
           [Bacillus cereus NVH0597-99]
 gi|218537868|gb|ACK90266.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein
           [Bacillus cereus AH820]
 gi|225787894|gb|ACO28111.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein
           [Bacillus cereus 03BB102]
 gi|227005774|gb|ACP15517.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein
           [Bacillus anthracis str. CDC 684]
 gi|228601062|gb|EEK58629.1| Uncharacterized deaminase yaaJ [Bacillus cereus BGSC 6E1]
 gi|228663775|gb|EEL19352.1| Uncharacterized deaminase yaaJ [Bacillus cereus 95/8201]
 gi|228694177|gb|EEL47857.1| Uncharacterized deaminase yaaJ [Bacillus cereus Rock3-42]
 gi|228815852|gb|EEM62086.1| Uncharacterized deaminase yaaJ [Bacillus thuringiensis serovar
           monterrey BGSC 4AJ1]
 gi|228828142|gb|EEM73868.1| Uncharacterized deaminase yaaJ [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228834389|gb|EEM79928.1| Uncharacterized deaminase yaaJ [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|228846887|gb|EEM91890.1| Uncharacterized deaminase yaaJ [Bacillus thuringiensis serovar
           pulsiensis BGSC 4CC1]
 gi|229268930|gb|ACQ50567.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein
           [Bacillus anthracis str. A0248]
          Length = 166

 Score =  116 bits (290), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 60/143 (41%), Positives = 83/143 (58%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  A+EEA+ A    E+P+GAV VLN ++IS A N     +   AHAE+LAI   C+ L
Sbjct: 9   FMQLAIEEAKKAEAIQEVPIGAVIVLNGEVISAAHNLRETEQRSIAHAELLAIDEACKKL 68

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  LYVTLEPC MCA  I L+R++R+ YGA +PKGG         T    +H  
Sbjct: 69  GTWRLEDATLYVTLEPCPMCAGGIVLSRVKRVVYGAGDPKGGCAGTLMNLLTDERFNHQC 128

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+  G+ E+    ++ +FF+E R
Sbjct: 129 EVVAGVLEEECGTLLTNFFRELR 151


>gi|228956462|ref|ZP_04118260.1| hypothetical protein bthur0005_100 [Bacillus thuringiensis serovar
           pakistani str. T13001]
 gi|228803219|gb|EEM50039.1| hypothetical protein bthur0005_100 [Bacillus thuringiensis serovar
           pakistani str. T13001]
          Length = 166

 Score =  116 bits (290), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 61/143 (42%), Positives = 84/143 (58%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  A+EEA+ A    E+P+GAV VL+ +IIS A N     +   AHAE+LAI   C+ L
Sbjct: 9   FMQLAIEEAKKAEEIQEVPIGAVIVLDGEIISVAHNLRETEQRSIAHAELLAIDDACKKL 68

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  LYVTLEPC MCA  I L+R++R+ YGAS+PKGG         T    +H  
Sbjct: 69  GTWRLEDATLYVTLEPCPMCAGGIVLSRVKRVVYGASDPKGGCAGTLMNLLTDERFNHQC 128

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+  G+ E+    ++ +FF+E R
Sbjct: 129 EVVSGVLEEECGTLLTNFFRELR 151


>gi|228963119|ref|ZP_04124290.1| Uncharacterized deaminase yaaJ [Bacillus thuringiensis serovar
           sotto str. T04001]
 gi|228796575|gb|EEM44012.1| Uncharacterized deaminase yaaJ [Bacillus thuringiensis serovar
           sotto str. T04001]
          Length = 195

 Score =  116 bits (290), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 60/143 (41%), Positives = 84/143 (58%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  A+EEA+ A    E+P+GAV VL+ ++IS A N     +   AHAE+LAI   C+ L
Sbjct: 9   FMQLAIEEAKKAEEMQEVPIGAVIVLDGEVISVAHNLRETEQRSIAHAELLAIDEACKKL 68

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  LYVTLEPC MCA  I L+R++R+ YGAS+PKGG         T    +H  
Sbjct: 69  GTWRLEDATLYVTLEPCPMCAGGIVLSRVKRVVYGASDPKGGCAGTLMNLLTDERFNHQC 128

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+  G+ E+    ++ +FF+E R
Sbjct: 129 EVVTGVLEEECGTLLTNFFRELR 151


>gi|288575144|ref|ZP_06393501.1| CMP/dCMP deaminase zinc-binding [Dethiosulfovibrio peptidovorans
           DSM 11002]
 gi|288570885|gb|EFC92442.1| CMP/dCMP deaminase zinc-binding [Dethiosulfovibrio peptidovorans
           DSM 11002]
          Length = 162

 Score =  116 bits (290), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 65/149 (43%), Positives = 83/149 (55%), Gaps = 1/149 (0%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           MK  N FM  A+EEA+ AA   +IPVGAV V  N +I R  N  R   D TAHAEI+AIR
Sbjct: 1   MKNKN-FMDLAIEEAKKAASEGDIPVGAVVVYKNDVIGRGRNLRRIDHDPTAHAEIVAIR 59

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              +      L   ++YVTLEPC MCA AI  +RI ++ YG ++PK G            
Sbjct: 60  QAAKARGSWNLSGCEIYVTLEPCPMCAGAIVQSRIAKVVYGCTDPKAGASGTLYDITRDT 119

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  E+  GI E R R +++DFF E R
Sbjct: 120 RLNHRCEVIKGIEEDRCRNMLRDFFSECR 148


>gi|282879130|ref|ZP_06287889.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Prevotella buccalis ATCC 35310]
 gi|281298772|gb|EFA91182.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Prevotella buccalis ATCC 35310]
          Length = 181

 Score =  116 bits (290), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 61/148 (41%), Positives = 83/148 (56%), Gaps = 5/148 (3%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           K+   FM  AL EA  A    E+P+GAV     +II+RA N+   L DVTAHAE+LAI  
Sbjct: 39  KQDEQFMQKALAEAHAAYDEGEVPIGAVITCQGRIIARAHNQTETLNDVTAHAEMLAITA 98

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
               L  + LP+  LYVT+EPC MCA A+  A++ R+ YGA + K      G Q Y    
Sbjct: 99  AAAQLGGKYLPQCTLYVTVEPCPMCAGAMGWAQVSRIVYGAGDDK-----RGYQRYAPNV 153

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            H    +  G+ E+  +Q++Q FFK +R
Sbjct: 154 LHTKATVTGGVLEEECKQLMQQFFKAKR 181


>gi|290890962|ref|ZP_06554026.1| hypothetical protein AWRIB429_1416 [Oenococcus oeni AWRIB429]
 gi|290479361|gb|EFD88021.1| hypothetical protein AWRIB429_1416 [Oenococcus oeni AWRIB429]
          Length = 156

 Score =  115 bits (289), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 58/143 (40%), Positives = 86/143 (60%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  AL++AQ A    E+P+GAV V +N++I+   NR  +    TAHAE L I    R L
Sbjct: 11  FMQLALKQAQTAFDEGEVPIGAVLVKDNQVIAADHNRKEQSGIATAHAEKLVIEGANRSL 70

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  L+VT+EPC MC  AI  +RI RL+YGA++PK GG+ +       +  +H  
Sbjct: 71  GDWRLNDCSLFVTIEPCVMCCGAIIQSRIPRLFYGAADPKFGGVSSLYHLLEDSRSNHFV 130

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+YP +  ++S  ++QDFF++ R
Sbjct: 131 EVYPDVLAKQSANLMQDFFRKLR 153


>gi|167038582|ref|YP_001666160.1| CMP/dCMP deaminase [Thermoanaerobacter pseudethanolicus ATCC 33223]
 gi|167038705|ref|YP_001661690.1| CMP/dCMP deaminase [Thermoanaerobacter sp. X514]
 gi|256751425|ref|ZP_05492303.1| CMP/dCMP deaminase zinc-binding [Thermoanaerobacter ethanolicus
           CCSD1]
 gi|300913736|ref|ZP_07131053.1| CMP/dCMP deaminase zinc-binding [Thermoanaerobacter sp. X561]
 gi|307723248|ref|YP_003902999.1| CMP/dCMP deaminase zinc-binding protein [Thermoanaerobacter sp.
           X513]
 gi|320116977|ref|YP_004187136.1| CMP/dCMP deaminase zinc-binding protein [Thermoanaerobacter brockii
           subsp. finnii Ako-1]
 gi|166852945|gb|ABY91354.1| CMP/dCMP deaminase, zinc-binding [Thermoanaerobacter sp. X514]
 gi|166857416|gb|ABY95824.1| CMP/dCMP deaminase, zinc-binding [Thermoanaerobacter
           pseudethanolicus ATCC 33223]
 gi|256749644|gb|EEU62670.1| CMP/dCMP deaminase zinc-binding [Thermoanaerobacter ethanolicus
           CCSD1]
 gi|300890421|gb|EFK85566.1| CMP/dCMP deaminase zinc-binding [Thermoanaerobacter sp. X561]
 gi|307580309|gb|ADN53708.1| CMP/dCMP deaminase zinc-binding protein [Thermoanaerobacter sp.
           X513]
 gi|319930068|gb|ADV80753.1| CMP/dCMP deaminase zinc-binding protein [Thermoanaerobacter brockii
           subsp. finnii Ako-1]
          Length = 148

 Score =  115 bits (289), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 60/145 (41%), Positives = 81/145 (55%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           N FM  AL EA+ +    E+PVGAV V   +II R  N+     D TAHAEI+AI+  C+
Sbjct: 3   NKFMEAALLEAKKSYQLGEVPVGAVIVKEGQIIGRGFNQKESTNDATAHAEIIAIKEACK 62

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
            L    L +  +YVTLEPC MCA AI  ARI+R+Y GA + K G           +    
Sbjct: 63  TLGSWRLDDCSMYVTLEPCPMCAGAILEARIKRVYIGAESDKSGAAGTVVDILNNSYLGS 122

Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149
             E+Y GI E+  + +++DFF+  R
Sbjct: 123 KTEVYFGIMEEECKTLLKDFFENLR 147


>gi|114327121|ref|YP_744278.1| tRNA-specific adenosine deaminase [Granulibacter bethesdensis
           CGDNIH1]
 gi|114315295|gb|ABI61355.1| tRNA-specific adenosine deaminase [Granulibacter bethesdensis
           CGDNIH1]
          Length = 178

 Score =  115 bits (289), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 58/128 (45%), Positives = 81/128 (63%), Gaps = 1/128 (0%)

Query: 23  EIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81
           E+PVGAV +     ++++A N      D +AHAE+LA+R   + L    L   DLYVTLE
Sbjct: 51  EVPVGAVVISPEGYLLAQAHNLTEANHDASAHAEMLAMREAAKRLGSTRLIGCDLYVTLE 110

Query: 82  PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141
           PC MCA A S  RIRR+ +GA +PKGGGIE+G +    ++CHH PEI  G+ E  +  ++
Sbjct: 111 PCPMCAQAASHFRIRRIIFGAYDPKGGGIEHGARVLNASSCHHQPEIIGGVRETEAVALL 170

Query: 142 QDFFKERR 149
           + FF+ RR
Sbjct: 171 RSFFQARR 178


>gi|145589597|ref|YP_001156194.1| CMP/dCMP deaminase, zinc-binding [Polynucleobacter necessarius
           subsp. asymbioticus QLW-P1DMWA-1]
 gi|145048003|gb|ABP34630.1| CMP/dCMP deaminase, zinc-binding protein [Polynucleobacter
           necessarius subsp. asymbioticus QLW-P1DMWA-1]
          Length = 152

 Score =  115 bits (289), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 59/143 (41%), Positives = 87/143 (60%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  A+E+A+ AAL  E+PVGAV V + K+IS A N+     D +AHAE+LA+R   +  
Sbjct: 10  FMQQAIEQAKLAALAGEVPVGAVVVRDGKVISSAFNKPISTHDPSAHAEMLALRAAAQSE 69

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               LP   LYVTLEPC MC+ A+  AR+ R+ YGA++PK G   +    ++    +H  
Sbjct: 70  ENYRLPGTTLYVTLEPCVMCSGAMLHARLDRVVYGAADPKTGAAGSVFDVFSSKQINHQT 129

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
            +  G+  +   Q++++FFKERR
Sbjct: 130 SVEGGVMGEECGQLLRNFFKERR 152


>gi|325281446|ref|YP_004253988.1| CMP/dCMP deaminase zinc-binding protein [Odoribacter splanchnicus
           DSM 20712]
 gi|324313255|gb|ADY33808.1| CMP/dCMP deaminase zinc-binding protein [Odoribacter splanchnicus
           DSM 20712]
          Length = 145

 Score =  115 bits (289), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 66/149 (44%), Positives = 82/149 (55%), Gaps = 5/149 (3%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M     +M  AL+EA+ AA   EIPVGAV V   KII+RA N   +L DVTAHAE+LAI 
Sbjct: 1   MTTHEYYMHKALQEARQAAEEGEIPVGAVVVCKGKIIARAHNETEKLNDVTAHAEMLAIT 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
           M    L  + L E  LYVT+EPCTMCA A+S A++  L  GA +P       G    T  
Sbjct: 61  MATSYLGGKYLNECTLYVTMEPCTMCAGALSWAQLGELVTGAPDP-----HRGYSRLTPP 115

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             H    I  GI      +I++ FFK +R
Sbjct: 116 VLHPKTRITSGILTGECSEIVKQFFKAKR 144


>gi|259048082|ref|ZP_05738483.1| tRNA-specific adenosine deaminase [Granulicatella adiacens ATCC
           49175]
 gi|259035143|gb|EEW36398.1| tRNA-specific adenosine deaminase [Granulicatella adiacens ATCC
           49175]
          Length = 168

 Score =  115 bits (289), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 59/146 (40%), Positives = 87/146 (59%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +++   FM  AL+EAQ A  + E+P+GAV VLN +II R  N   + +D T HAEI AIR
Sbjct: 3   LQEKEFFMREALKEAQKAYDQEEVPIGAVVVLNGEIIGRGHNLREKEQDATLHAEIKAIR 62

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              + L    L + +L+VTLEPC MC+ A+ LAR++++ +GA +PK G           +
Sbjct: 63  QANQHLGSWRLEDCELFVTLEPCPMCSGAMILARMKKVVFGAFDPKAGTAGTFMNLLQDS 122

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFK 146
             +H  E+  GI E   ++I+Q FFK
Sbjct: 123 RFNHQVEVEQGILEDECKEILQQFFK 148


>gi|229053868|ref|ZP_04195305.1| hypothetical protein bcere0026_110 [Bacillus cereus AH603]
 gi|228721478|gb|EEL72995.1| hypothetical protein bcere0026_110 [Bacillus cereus AH603]
          Length = 164

 Score =  115 bits (289), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 62/149 (41%), Positives = 86/149 (57%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M++   FM  A+EEA+ A    E+P+GAV VL+ ++IS A N     +   AHAE+LAI 
Sbjct: 1   MERDIYFMQLAIEEAKKAEAIQEVPIGAVIVLDGEVISVAHNLRETEQRSIAHAELLAID 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
             C+ L    L +  LYVTLEPC MCA  I L+RI+R+ YGAS+PKGG         T  
Sbjct: 61  EACKKLGTWRLEDATLYVTLEPCPMCAGGIVLSRIKRVVYGASDPKGGCAGTLMNLLTDE 120

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  E+  G+ E+    ++  FF+E R
Sbjct: 121 RFNHQCEVVAGVLEEECGTLLTIFFRELR 149


>gi|228918972|ref|ZP_04082353.1| hypothetical protein bthur0011_100 [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
 gi|228840687|gb|EEM85947.1| hypothetical protein bthur0011_100 [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
          Length = 166

 Score =  115 bits (289), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 60/143 (41%), Positives = 84/143 (58%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  A+EEA+ A    E+P+GAV VL+ ++IS A N     +   AHAE+LAI   C+ L
Sbjct: 9   FMQLAIEEAKKAEEIQEVPIGAVIVLDGEVISVAHNLRETEQRSIAHAELLAIDEACKKL 68

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  LYVTLEPC MCA  I L+R++R+ YGAS+PKGG         T    +H  
Sbjct: 69  GTWRLEDATLYVTLEPCPMCAGGIVLSRVKRVVYGASDPKGGCAGTLMNLLTDERFNHQC 128

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+  G+ E+    ++ +FF+E R
Sbjct: 129 EVVSGVLEEECGTLLTNFFRELR 151


>gi|228937324|ref|ZP_04099972.1| hypothetical protein bthur0008_110 [Bacillus thuringiensis serovar
           berliner ATCC 10792]
 gi|228970210|ref|ZP_04130871.1| hypothetical protein bthur0003_100 [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228976780|ref|ZP_04137194.1| hypothetical protein bthur0002_100 [Bacillus thuringiensis Bt407]
 gi|228782942|gb|EEM31106.1| hypothetical protein bthur0002_100 [Bacillus thuringiensis Bt407]
 gi|228789511|gb|EEM37429.1| hypothetical protein bthur0003_100 [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228822349|gb|EEM68329.1| hypothetical protein bthur0008_110 [Bacillus thuringiensis serovar
           berliner ATCC 10792]
 gi|326937814|gb|AEA13710.1| cytosine deaminase [Bacillus thuringiensis serovar chinensis CT-43]
          Length = 166

 Score =  115 bits (289), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 60/143 (41%), Positives = 84/143 (58%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  A+EEA+ A    E+P+GAV VL+ ++IS A N     +   AHAE+LAI   C+ L
Sbjct: 9   FMQLAIEEAKKAEEIQEVPIGAVIVLDGEVISVAHNLRETEQRSIAHAELLAIDEACKKL 68

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  LYVTLEPC MCA  I L+R++R+ YGAS+PKGG         T    +H  
Sbjct: 69  GTWRLEDATLYVTLEPCPMCAGGIVLSRVKRVVYGASDPKGGCAGTLMNLLTDERFNHQC 128

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+  G+ E+    ++ +FF+E R
Sbjct: 129 EVVSGVLEEECGTLLTNFFRELR 151


>gi|310828329|ref|YP_003960686.1| alpha amylase catalytic region [Eubacterium limosum KIST612]
 gi|308740063|gb|ADO37723.1| alpha amylase catalytic region [Eubacterium limosum KIST612]
          Length = 630

 Score =  115 bits (289), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 57/142 (40%), Positives = 86/142 (60%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           MS A+EEA+      E+PVGAV + N +II+ A N+   L+D TAHAE+L IR   + L 
Sbjct: 489 MSKAIEEAERGIEEGEVPVGAVILHNGEIIAAAHNQKETLQDPTAHAEMLVIREASKKLG 548

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
           +  L + +LYVT EPC MC  A+  +RIR+L YG    + GG+E   +        ++ E
Sbjct: 549 RWRLDDCELYVTAEPCPMCMGAVIQSRIRKLVYGTWETRFGGVETTAELGKHPMLSNATE 608

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
           IY GI E++ +++++ FF+  R
Sbjct: 609 IYSGICEEKCQELLERFFQNNR 630


>gi|212637865|ref|YP_002314385.1| cytosine/adenosine deaminase [Anoxybacillus flavithermus WK1]
 gi|212559345|gb|ACJ32400.1| Cytosine/adenosine deaminase [Anoxybacillus flavithermus WK1]
          Length = 177

 Score =  115 bits (289), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 62/150 (41%), Positives = 91/150 (60%), Gaps = 2/150 (1%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGN-RNRELKDVTAHAEILAI 59
           MK    +M  A+EEA+ A    E+P+GAV V N+++I+RA N R R+ + + AHAE+LAI
Sbjct: 16  MKNDEYYMHLAIEEAKKAEKIGEVPIGAVIVYNDQVIARAHNLRERDQRSI-AHAELLAI 74

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
              C+ L    L +  LYVTLEPC MCA AI L+RI+R+ +GAS+PKGG           
Sbjct: 75  DEACKKLGTWRLEQATLYVTLEPCAMCAGAIVLSRIKRVVFGASDPKGGCAGTLMNLLQE 134

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
              +H  E+  GI  ++   ++ +FF++ R
Sbjct: 135 PRFNHQVEVVSGILGEQCGNMLSEFFRQLR 164


>gi|229074082|ref|ZP_04207131.1| hypothetical protein bcere0024_110 [Bacillus cereus Rock4-18]
 gi|229094742|ref|ZP_04225750.1| hypothetical protein bcere0020_110 [Bacillus cereus Rock3-29]
 gi|229100808|ref|ZP_04231626.1| hypothetical protein bcere0019_200 [Bacillus cereus Rock3-28]
 gi|228682615|gb|EEL36674.1| hypothetical protein bcere0019_200 [Bacillus cereus Rock3-28]
 gi|228688680|gb|EEL42550.1| hypothetical protein bcere0020_110 [Bacillus cereus Rock3-29]
 gi|228709045|gb|EEL61169.1| hypothetical protein bcere0024_110 [Bacillus cereus Rock4-18]
          Length = 166

 Score =  115 bits (289), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 60/143 (41%), Positives = 84/143 (58%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  A+EEA+ A    E+P+GAV VL+ ++IS A N     +   AHAE+LAI   C+ L
Sbjct: 9   FMQLAIEEAKKAEEIQEVPIGAVIVLDGEVISVAHNLRETEQRSIAHAELLAIDEACKKL 68

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  LYVTLEPC MCA  I L+R++R+ YGAS+PKGG         T    +H  
Sbjct: 69  GTWRLEDATLYVTLEPCPMCAGGIVLSRVKRVVYGASDPKGGCAGTLMNLLTDERFNHQC 128

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+  G+ E+    ++ +FF+E R
Sbjct: 129 EVVTGVLEEECGTLLTNFFRELR 151


>gi|228898775|ref|ZP_04063059.1| hypothetical protein bthur0014_110 [Bacillus thuringiensis IBL
           4222]
 gi|228860867|gb|EEN05243.1| hypothetical protein bthur0014_110 [Bacillus thuringiensis IBL
           4222]
          Length = 166

 Score =  115 bits (289), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 60/143 (41%), Positives = 84/143 (58%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  A+EEA+ A    E+P+GAV VL+ ++IS A N     +   AHAE+LAI   C+ L
Sbjct: 9   FMQLAIEEAKKAEEIQEVPIGAVIVLDGEVISVAHNLRETEQRSIAHAELLAIDEACKKL 68

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  LYVTLEPC MCA  I L+R++R+ YGAS+PKGG         T    +H  
Sbjct: 69  GTWRLEDATLYVTLEPCPMCAGGIVLSRVKRVVYGASDPKGGCAGTLMNLLTDERFNHQC 128

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+  G+ E+    ++ +FF+E R
Sbjct: 129 EVVTGVLEEECGTLLTNFFRELR 151


>gi|30018294|ref|NP_829925.1| cytosine deaminase [Bacillus cereus ATCC 14579]
 gi|229125538|ref|ZP_04254572.1| hypothetical protein bcere0015_100 [Bacillus cereus BDRD-Cer4]
 gi|29893834|gb|AAP07126.1| Cytosine deaminase [Bacillus cereus ATCC 14579]
 gi|228657922|gb|EEL13726.1| hypothetical protein bcere0015_100 [Bacillus cereus BDRD-Cer4]
          Length = 166

 Score =  115 bits (289), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 60/143 (41%), Positives = 84/143 (58%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  A+EEA+ A    E+P+GAV VL+ ++IS A N     +   AHAE+LAI   C+ L
Sbjct: 9   FMQLAIEEAKKAEEIQEVPIGAVIVLDGEVISVAHNLRETEQRSIAHAELLAIDDACKKL 68

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  LYVTLEPC MCA  I L+R++R+ YGAS+PKGG         T    +H  
Sbjct: 69  GTWRLEDATLYVTLEPCPMCAGGIVLSRVKRVVYGASDPKGGCAGTLMNLLTDERFNHQC 128

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+  G+ E+    ++ +FF+E R
Sbjct: 129 EVVSGVLEEECGTLLTNFFRELR 151


>gi|229039926|ref|ZP_04189692.1| hypothetical protein bcere0027_100 [Bacillus cereus AH676]
 gi|228727416|gb|EEL78607.1| hypothetical protein bcere0027_100 [Bacillus cereus AH676]
          Length = 166

 Score =  115 bits (289), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 60/143 (41%), Positives = 84/143 (58%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  A+EEA+ A    E+P+GAV VL+ ++IS A N     +   AHAE+LAI   C+ L
Sbjct: 9   FMQLAIEEAKKAEEIQEVPIGAVIVLDGEVISVAHNLRETEQRSIAHAELLAIDDACKKL 68

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  LYVTLEPC MCA  I L+R++R+ YGAS+PKGG         T    +H  
Sbjct: 69  GTWRLEDATLYVTLEPCPMCAGGIVLSRVKRVVYGASDPKGGCAGTLMNLLTDERFNHQC 128

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+  G+ E+    ++ +FF+E R
Sbjct: 129 EVVSGVLEEECGTLLTNFFRELR 151


>gi|229142827|ref|ZP_04271271.1| hypothetical protein bcere0012_100 [Bacillus cereus BDRD-ST24]
 gi|229148430|ref|ZP_04276688.1| hypothetical protein bcere0011_100 [Bacillus cereus m1550]
 gi|296500855|ref|YP_003662555.1| cytosine deaminase [Bacillus thuringiensis BMB171]
 gi|228635039|gb|EEK91610.1| hypothetical protein bcere0011_100 [Bacillus cereus m1550]
 gi|228640641|gb|EEK97027.1| hypothetical protein bcere0012_100 [Bacillus cereus BDRD-ST24]
 gi|296321907|gb|ADH04835.1| cytosine deaminase [Bacillus thuringiensis BMB171]
          Length = 166

 Score =  115 bits (289), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 60/143 (41%), Positives = 84/143 (58%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  A+EEA+ A    E+P+GAV VL+ ++IS A N     +   AHAE+LAI   C+ L
Sbjct: 9   FMQLAIEEAKKAEEIQEVPIGAVIVLDGEVISVAHNLRETEQRSIAHAELLAIDDACKKL 68

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  LYVTLEPC MCA  I L+R++R+ YGAS+PKGG         T    +H  
Sbjct: 69  GTWRLEDATLYVTLEPCPMCAGGIVLSRVKRVVYGASDPKGGCAGTLMNLLTDERFNHQC 128

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+  G+ E+    ++ +FF+E R
Sbjct: 129 EVVSGVLEEECGTLLTNFFRELR 151


>gi|126662495|ref|ZP_01733494.1| putative cytosine/adenosine deaminase [Flavobacteria bacterium
           BAL38]
 gi|126625874|gb|EAZ96563.1| putative cytosine/adenosine deaminase [Flavobacteria bacterium
           BAL38]
          Length = 146

 Score =  115 bits (289), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 59/145 (40%), Positives = 86/145 (59%), Gaps = 6/145 (4%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           + FM  AL+EA+ A  + EIPVGAV V++NK+I+R  N    L DVTAHAE+ AI     
Sbjct: 8   DYFMKKALQEAETAFEKGEIPVGAVIVIDNKVIARTHNLTELLHDVTAHAEMQAITSAAN 67

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
            L  + L +  LYVTLEPC MCA A+  ++I ++ +GAS+   G  + GTQ       H 
Sbjct: 68  FLGGKYLKDCTLYVTLEPCQMCAGALYWSQISKIVFGASDENRGFQKMGTQL------HP 121

Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149
             ++  G+ E+    +++ FFK +R
Sbjct: 122 KTQVISGVLEKECADLMKSFFKNKR 146


>gi|268318039|ref|YP_003291758.1| CMP/dCMP deaminase zinc-binding protein [Rhodothermus marinus DSM
           4252]
 gi|262335573|gb|ACY49370.1| CMP/dCMP deaminase zinc-binding protein [Rhodothermus marinus DSM
           4252]
          Length = 158

 Score =  115 bits (288), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 60/143 (41%), Positives = 82/143 (57%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  AL EA+ A    E+PVGAV V +++I+ R  N   +LKD TAHAE+LAI   C  L
Sbjct: 13  WMEAALREAEQAFEEGEVPVGAVVVKDDRIVGRGHNCVEQLKDPTAHAEMLAITAACATL 72

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
             + L    LYVTLEPC MCA AI  AR+ R+ +GA + K G              +H  
Sbjct: 73  DTKYLRGCTLYVTLEPCPMCAGAIVWARLDRVVFGAFDEKAGAASTLYNILQDPRLNHRV 132

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+  G+  +R+  ++Q FF+ERR
Sbjct: 133 EVISGVEAERAAALLQRFFRERR 155


>gi|228905818|ref|ZP_04069717.1| hypothetical protein bthur0013_110 [Bacillus thuringiensis IBL 200]
 gi|228853826|gb|EEM98584.1| hypothetical protein bthur0013_110 [Bacillus thuringiensis IBL 200]
          Length = 166

 Score =  115 bits (288), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 60/143 (41%), Positives = 84/143 (58%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  A+EEA+ A    E+P+GAV VL+ ++IS A N     +   AHAE+LAI   C+ L
Sbjct: 9   FMQLAIEEAKKAEEIQEVPIGAVIVLDGEVISVAHNLRETEQRSIAHAELLAIDEACKKL 68

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  LYVTLEPC MCA  I L+R++R+ YGAS+PKGG         T    +H  
Sbjct: 69  GTWRLEDATLYVTLEPCPMCAGGIVLSRVKRVVYGASDPKGGCAGTLMNLLTDERFNHQC 128

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+  G+ E+    ++ +FF+E R
Sbjct: 129 EVVTGVLEEECGTLLTNFFRELR 151


>gi|254467918|ref|ZP_05081324.1| tRNA-specific adenosine deaminase [beta proteobacterium KB13]
 gi|207086728|gb|EDZ64011.1| tRNA-specific adenosine deaminase [beta proteobacterium KB13]
          Length = 160

 Score =  115 bits (288), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 60/149 (40%), Positives = 85/149 (57%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M     FM  AL+EA+ A   +EIP+GA+  LNN+II R  N   +  D T HAEI+A+R
Sbjct: 12  MTDHTQFMQAALDEAEKARSLDEIPIGAIVTLNNEIIGRGFNSVIKNSDPTCHAEIMALR 71

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
                LS   LPEV+LYVTLEPC MC  AI  AR++++Y+GA + K    +   Q     
Sbjct: 72  DAAHHLSNYRLPEVNLYVTLEPCIMCLGAIFHARVKQVYFGAYDTKFHSCDPSQQLVNNK 131

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H      GI E+    +++++FK +R
Sbjct: 132 IINHHTSFEGGILEEECSTLLKNYFKNKR 160


>gi|224025750|ref|ZP_03644116.1| hypothetical protein BACCOPRO_02491 [Bacteroides coprophilus DSM
           18228]
 gi|224018986|gb|EEF76984.1| hypothetical protein BACCOPRO_02491 [Bacteroides coprophilus DSM
           18228]
          Length = 144

 Score =  115 bits (288), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 63/149 (42%), Positives = 84/149 (56%), Gaps = 5/149 (3%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M     +M  AL+EA+ AA R E+PVGAV V  ++II+RA N    L DVTAHAE+ AI 
Sbjct: 1   MADDTYYMRQALQEAREAANRGEVPVGAVVVCRDRIIARAHNLTETLTDVTAHAEMQAIT 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
                L  + L    LYVT+EPC MCA AI+ A+  RL YGA + K      G Q Y   
Sbjct: 61  AAAGWLGGKYLNNCTLYVTIEPCVMCAGAIAWAQTGRLVYGADDEK-----RGFQRYAPQ 115

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             H   ++  G+      Q+++DFF++RR
Sbjct: 116 ALHPKTQVTSGVLADECAQLMKDFFQKRR 144


>gi|218234516|ref|YP_002364872.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein
           [Bacillus cereus B4264]
 gi|218162473|gb|ACK62465.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein
           [Bacillus cereus B4264]
          Length = 166

 Score =  115 bits (288), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 60/143 (41%), Positives = 84/143 (58%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  A+EEA+ A    E+P+GAV VL+ ++IS A N     +   AHAE+LAI   C+ L
Sbjct: 9   FMQLAIEEAKKAEEIQEVPIGAVIVLDGEVISVAHNLRETEQRSIAHAELLAIDDACKKL 68

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  LYVTLEPC MCA  I L+R++R+ YGAS+PKGG         T    +H  
Sbjct: 69  GTWRLEDATLYVTLEPCPMCAGGIVLSRVKRVVYGASDPKGGCAGTLMNLLTDDRFNHQC 128

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+  G+ E+    ++ +FF+E R
Sbjct: 129 EVVSGVLEEECGTLLTNFFRELR 151


>gi|255023462|ref|ZP_05295448.1| tRNA-specific adenosine deaminase [Listeria monocytogenes FSL
           J1-208]
          Length = 156

 Score =  115 bits (288), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 58/143 (40%), Positives = 88/143 (61%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  ALEEA+ A    E+P+GAV VL+ +II RA N     ++   HAE+LAI+  C+  
Sbjct: 6   FMQQALEEAEKAREIGEVPIGAVVVLDGEIIGRAHNLRETSQNAVTHAELLAIQDACKHQ 65

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
           +   L   +LYVTLEPC MC+ AI L+RI ++YYGA +PK G   +          +H+ 
Sbjct: 66  NSWRLSGAELYVTLEPCPMCSGAILLSRIEKVYYGAKDPKAGTAGSLMNLLQDDRFNHTC 125

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+  G+ E+ S +++++FF++ R
Sbjct: 126 EVEAGLMEKESSEMLKNFFQDLR 148


>gi|87310742|ref|ZP_01092869.1| cytosine deaminase [Blastopirellula marina DSM 3645]
 gi|87286499|gb|EAQ78406.1| cytosine deaminase [Blastopirellula marina DSM 3645]
          Length = 166

 Score =  115 bits (288), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 64/148 (43%), Positives = 87/148 (58%), Gaps = 6/148 (4%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
            +FM  ALE A+ AA   E+PVGA+ V NN++I+ A N+   L D TAHAE++AI     
Sbjct: 17  QIFMYQALELAEQAAREKEVPVGAIIVHNNRVIAAAHNQRETLHDPTAHAEMIAITQAAE 76

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT--- 121
            L    L +  LYVTLEPC MCA AI  ARI  + +GA +PK G +   T  YTL +   
Sbjct: 77  SLQNWRLADCTLYVTLEPCPMCAGAILQARIPTVVFGAIDPKAGAV---TSLYTLLSDSR 133

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H  E+ PGI   +   ++ +FF+ RR
Sbjct: 134 LNHRCEVVPGILAPQCGDVLTEFFRARR 161


>gi|229107707|ref|ZP_04237345.1| hypothetical protein bcere0018_100 [Bacillus cereus Rock1-15]
 gi|228675747|gb|EEL30953.1| hypothetical protein bcere0018_100 [Bacillus cereus Rock1-15]
          Length = 166

 Score =  115 bits (288), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 60/143 (41%), Positives = 84/143 (58%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  A+EEA+ A    E+P+GAV VL+ ++IS A N     +   AHAE+LAI   C+ L
Sbjct: 9   FMQLAIEEAKKAEEIQEVPIGAVIVLDGEVISVAHNLRETEQRSIAHAELLAIDDACKKL 68

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  LYVTLEPC MCA  I L+R++R+ YGAS+PKGG         T    +H  
Sbjct: 69  GTWRLEDATLYVTLEPCPMCAGGIVLSRVKRVVYGASDPKGGCAGTLMNLLTDERFNHQC 128

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+  G+ E+    ++ +FF+E R
Sbjct: 129 EVVSGVLEEECGALLTNFFRELR 151


>gi|224498434|ref|ZP_03666783.1| hypothetical protein LmonF1_01565 [Listeria monocytogenes Finland
           1988]
          Length = 156

 Score =  115 bits (288), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 59/143 (41%), Positives = 86/143 (60%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  ALEEA+ A    E+P+GAV VL+ +II RA N     ++   HAE+LAI+  C+  
Sbjct: 6   FMQQALEEAEKARDIGEVPIGAVVVLDGEIIGRAHNLRETSQNAVTHAELLAIQDACKHQ 65

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
           +   L   +LYVTLEPC MC+ AI L+RI ++YYGA +PK G   +          +H+ 
Sbjct: 66  NSWRLSGAELYVTLEPCPMCSGAILLSRIEKVYYGAKDPKAGTAGSLMNLLQDDRFNHTC 125

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+  G+ E  S ++++ FF+E R
Sbjct: 126 EVEAGLMESESSEMLKSFFQELR 148


>gi|16804756|ref|NP_466241.1| hypothetical protein lmo2719 [Listeria monocytogenes EGD-e]
 gi|224502871|ref|ZP_03671178.1| hypothetical protein LmonFR_10179 [Listeria monocytogenes FSL
           R2-561]
 gi|255029049|ref|ZP_05301000.1| hypothetical protein LmonL_07681 [Listeria monocytogenes LO28]
 gi|16412219|emb|CAD00932.1| lmo2719 [Listeria monocytogenes EGD-e]
          Length = 156

 Score =  115 bits (288), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 59/143 (41%), Positives = 86/143 (60%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  ALEEA+ A    E+P+GAV VL+ +II RA N     ++   HAE+LAI+  C+  
Sbjct: 6   FMQQALEEAEKARDIGEVPIGAVVVLDGEIIGRAHNLRETSQNAVTHAELLAIQDACKHQ 65

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
           +   L   +LYVTLEPC MC+ AI L+RI ++YYGA +PK G   +          +H+ 
Sbjct: 66  NSWRLSGAELYVTLEPCPMCSGAILLSRIEKVYYGAKDPKAGTAGSLMNLLQDDRFNHTC 125

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+  G+ E  S ++++ FF+E R
Sbjct: 126 EVEAGLMESESSEMLKSFFQELR 148


>gi|224368847|ref|YP_002603009.1| putative riboflavin biosynthesis protein ribD [Desulfobacterium
           autotrophicum HRM2]
 gi|223691564|gb|ACN14847.1| putative riboflavin biosynthesis protein ribD [Desulfobacterium
           autotrophicum HRM2]
          Length = 150

 Score =  115 bits (288), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 63/144 (43%), Positives = 87/144 (60%), Gaps = 1/144 (0%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNN-KIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           +M  ALEEA+ AA  +E+PVGAV V    +I++R  N+   L D TAHAE+LA+RMG   
Sbjct: 6   YMKIALEEAEKAARMDEVPVGAVLVDGTGRILARTHNQPITLCDPTAHAEMLALRMGGEK 65

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
                LP   LY T+EPC MC  AI  AR+ R+ YGA +PK G   +   F   A  +H+
Sbjct: 66  TGNYRLPGATLYSTIEPCVMCMGAIIHARLSRIVYGACDPKWGAAGSLYNFAFDARLNHT 125

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
            EI PG+ +  + +II+ FF+ +R
Sbjct: 126 LEIVPGVCKDEATEIIRGFFRNKR 149


>gi|332637118|ref|ZP_08415981.1| tRNA-adenosine deaminase [Weissella cibaria KACC 11862]
          Length = 181

 Score =  115 bits (288), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 56/145 (38%), Positives = 84/145 (57%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           + FM  A++EA+ A    E+P+GAV V + +II R  N    L+D + HAE+ AI    R
Sbjct: 10  DYFMGEAIKEAKKAGALGEVPIGAVVVQHGEIIGRGFNLRERLEDASQHAELQAITEANR 69

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
           ++    LP+  L+VTLEPC MCA  I  +RI  +YYGA +PK G + +          +H
Sbjct: 70  LVKSWRLPDAQLFVTLEPCIMCAGIIQQSRISDVYYGAEDPKAGAVHSMYHILEDERLNH 129

Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149
              ++ GI EQ S  ++++FF+E R
Sbjct: 130 QVHVHQGIREQESGDMLRNFFREIR 154


>gi|312869691|ref|ZP_07729838.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Lactobacillus oris PB013-T2-3]
 gi|311094740|gb|EFQ53037.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Lactobacillus oris PB013-T2-3]
          Length = 164

 Score =  115 bits (288), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 63/144 (43%), Positives = 88/144 (61%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           K+   FM+ AL EA+ AA+ NE+P+GAV V +N+II R  N     +DVT HAE+LAI  
Sbjct: 3   KEQQKFMAAALAEARQAAILNEVPIGAVVVKDNQIIGRGHNMREHFQDVTYHAEMLAIME 62

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
            C  L    L + DLYVTLEPC MC+ AI  ARI  LYYGA++PK G +++       + 
Sbjct: 63  ACERLHSWRLEDCDLYVTLEPCIMCSGAIINARIANLYYGAADPKAGAVDSLYHLLADSR 122

Query: 122 CHHSPEIYPGISEQRSRQIIQDFF 145
            +H   +  GI +    Q++++FF
Sbjct: 123 LNHQVRVESGIMQAECSQVLKEFF 146


>gi|47095526|ref|ZP_00233135.1| cytidine/deoxycytidylate deaminase family protein [Listeria
           monocytogenes str. 1/2a F6854]
 gi|254899824|ref|ZP_05259748.1| cytidine/deoxycytidylate deaminase family protein [Listeria
           monocytogenes J0161]
 gi|254912971|ref|ZP_05262983.1| cytidine/deoxycytidylate deaminase family protein [Listeria
           monocytogenes J2818]
 gi|254937352|ref|ZP_05269049.1| cytidine/deoxycytidylate deaminase [Listeria monocytogenes F6900]
 gi|255025258|ref|ZP_05297244.1| cytidine/deoxycytidylate deaminase family protein [Listeria
           monocytogenes FSL J2-003]
 gi|284800395|ref|YP_003412260.1| hypothetical protein LM5578_0141 [Listeria monocytogenes 08-5578]
 gi|284993581|ref|YP_003415349.1| hypothetical protein LM5923_0141 [Listeria monocytogenes 08-5923]
 gi|47016136|gb|EAL07060.1| cytidine/deoxycytidylate deaminase family protein [Listeria
           monocytogenes str. 1/2a F6854]
 gi|258609958|gb|EEW22566.1| cytidine/deoxycytidylate deaminase [Listeria monocytogenes F6900]
 gi|284055957|gb|ADB66898.1| hypothetical protein LM5578_0141 [Listeria monocytogenes 08-5578]
 gi|284059048|gb|ADB69987.1| hypothetical protein LM5923_0141 [Listeria monocytogenes 08-5923]
 gi|293590973|gb|EFF99307.1| cytidine/deoxycytidylate deaminase family protein [Listeria
           monocytogenes J2818]
          Length = 156

 Score =  115 bits (288), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 59/143 (41%), Positives = 86/143 (60%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  ALEEA+ A    E+P+GAV VL+ +II RA N     ++   HAE+LAI+  C+  
Sbjct: 6   FMQQALEEAEKARDIGEVPIGAVVVLDGEIIGRAHNLRETSQNAVTHAELLAIQDACKHQ 65

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
           +   L   +LYVTLEPC MC+ AI L+RI ++YYGA +PK G   +          +H+ 
Sbjct: 66  NSWRLSGAELYVTLEPCPMCSGAILLSRIEKVYYGAKDPKAGTAGSLMNLLQDDRFNHTC 125

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+  G+ E  S ++++ FF+E R
Sbjct: 126 EVEAGLMESESSEMLKSFFQELR 148


>gi|163938030|ref|YP_001642914.1| CMP/dCMP deaminase zinc-binding [Bacillus weihenstephanensis KBAB4]
 gi|163860227|gb|ABY41286.1| CMP/dCMP deaminase zinc-binding [Bacillus weihenstephanensis KBAB4]
          Length = 164

 Score =  115 bits (288), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 61/145 (42%), Positives = 84/145 (57%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M++   FM  A+EEA+ A    E+P+GAV VL+ ++IS A N     +   AHAE+LAI 
Sbjct: 1   MERDIYFMQLAIEEAKKAEAIQEVPIGAVIVLDGEVISVAHNLRETEQRSIAHAELLAID 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
             C+ L    L +  LYVTLEPC MCA  I L+RI+R+ YGAS+PKGG         T  
Sbjct: 61  EACKKLGTWRLEDATLYVTLEPCPMCAGGIVLSRIKRVVYGASDPKGGCAGTLMNLLTDE 120

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFF 145
             +H  E+ PG+ E+    ++  FF
Sbjct: 121 RFNHQCEVVPGVLEEECGTLLTIFF 145


>gi|223983492|ref|ZP_03633678.1| hypothetical protein HOLDEFILI_00958 [Holdemania filiformis DSM
           12042]
 gi|223964664|gb|EEF68990.1| hypothetical protein HOLDEFILI_00958 [Holdemania filiformis DSM
           12042]
          Length = 181

 Score =  115 bits (288), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 58/148 (39%), Positives = 86/148 (58%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           K    FM  A++EA+ A   +E+P+GAV V + KI++R  N   + +   AHAEI+AI  
Sbjct: 8   KNDEYFMRQAIKEARKAEALDEVPIGAVLVHDGKILARGHNLREKKQSSLAHAEIVAIEK 67

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
            CR      L +  LYVTLEPC MCA AI  +RI ++ YGA++PKGG +      Y +  
Sbjct: 68  ACRKTGSWRLEDCVLYVTLEPCPMCAGAILQSRIAKVVYGAADPKGGSVGTCFNLYDIPG 127

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H PE+  G+       +++ FFK++R
Sbjct: 128 FNHYPEVLGGVLSVDCAMLLKTFFKQKR 155


>gi|206972670|ref|ZP_03233610.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein
           [Bacillus cereus AH1134]
 gi|228950569|ref|ZP_04112705.1| hypothetical protein bthur0006_110 [Bacillus thuringiensis serovar
           kurstaki str. T03a001]
 gi|229077294|ref|ZP_04209977.1| hypothetical protein bcere0023_200 [Bacillus cereus Rock4-2]
 gi|229176621|ref|ZP_04304027.1| hypothetical protein bcere0005_100 [Bacillus cereus 172560W]
 gi|206732390|gb|EDZ49572.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein
           [Bacillus cereus AH1134]
 gi|228606851|gb|EEK64266.1| hypothetical protein bcere0005_100 [Bacillus cereus 172560W]
 gi|228706017|gb|EEL58322.1| hypothetical protein bcere0023_200 [Bacillus cereus Rock4-2]
 gi|228809112|gb|EEM55595.1| hypothetical protein bthur0006_110 [Bacillus thuringiensis serovar
           kurstaki str. T03a001]
          Length = 166

 Score =  115 bits (288), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 60/143 (41%), Positives = 83/143 (58%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  A+EEA+ A    E+P+GAV VL+ ++IS A N     +   AHAE+LAI   C+ L
Sbjct: 9   FMQLAIEEAKKAEEIQEVPIGAVIVLDGEVISVAHNLRETEQRSIAHAELLAIDEACKKL 68

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  LYVTLEPC MCA  I L+R++R+ YGAS+PKGG         T    +H  
Sbjct: 69  GTWRLEDATLYVTLEPCPMCAGGIVLSRVKRVVYGASDPKGGCAGTLMNLLTDERFNHQC 128

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+  G+ E+    ++  FF+E R
Sbjct: 129 EVVSGVLEEECGTLLTSFFRELR 151


>gi|146278266|ref|YP_001168425.1| CMP/dCMP deaminase, zinc-binding [Rhodobacter sphaeroides ATCC
           17025]
 gi|145556507|gb|ABP71120.1| CMP/dCMP deaminase, zinc-binding [Rhodobacter sphaeroides ATCC
           17025]
          Length = 114

 Score =  115 bits (288), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 64/113 (56%), Positives = 79/113 (69%), Gaps = 1/113 (0%)

Query: 37  ISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIR 96
           ++RAGNR REL D TAHAE+LAIR  C  L  E L   DLYVTLEPC MCAAAIS ARI 
Sbjct: 1   MARAGNRCRELSDPTAHAEMLAIRAACAELG-ERLTGCDLYVTLEPCPMCAAAISAARIA 59

Query: 97  RLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
           RLYYGA++PK GG+  G + +    CHH P++Y GI E+ +  +++ FF  RR
Sbjct: 60  RLYYGAADPKSGGVAQGARVFAHPQCHHVPDVYDGIREEEAAALLRGFFAARR 112


>gi|319936699|ref|ZP_08011112.1| tRNA-adenosine deaminase [Coprobacillus sp. 29_1]
 gi|319808256|gb|EFW04821.1| tRNA-adenosine deaminase [Coprobacillus sp. 29_1]
          Length = 148

 Score =  115 bits (287), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 60/143 (41%), Positives = 88/143 (61%), Gaps = 3/143 (2%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  A +EA  A   +E+P+GA+ V ++ +I+ A N+    +DVTAHAE+LAI+  C+IL
Sbjct: 6   YMKLAYQEAIKAKDIDEVPIGAIIVKDDCVIASAYNQKESKRDVTAHAEMLAIQKACKIL 65

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L    LY TLEPC MC+ AI  +RI ++ YGAS  +  GI   +Q+    T +H P
Sbjct: 66  GTWHLDGCTLYSTLEPCMMCSGAIIQSRIAKVVYGASGQRWHGI---SQYLHNHTFNHYP 122

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           +I  GI E+   Q+I D+FK +R
Sbjct: 123 DITSGILEEDCCQLISDYFKSKR 145


>gi|229113696|ref|ZP_04243133.1| Uncharacterized deaminase yaaJ [Bacillus cereus Rock1-3]
 gi|228669762|gb|EEL25167.1| Uncharacterized deaminase yaaJ [Bacillus cereus Rock1-3]
          Length = 166

 Score =  115 bits (287), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 60/143 (41%), Positives = 84/143 (58%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  A+EEA+ A    E+P+GAV VL+ ++IS A N     +   AHAE+LAI   C+ L
Sbjct: 9   FMQLAIEEAKKAEEIQEVPIGAVIVLDGEVISVAHNLRETEQRSIAHAELLAIDEACKNL 68

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  LYVTLEPC MCA  I L+R++R+ YGAS+PKGG         T    +H  
Sbjct: 69  GTWRLEDATLYVTLEPCPMCAGGIVLSRVKRVVYGASDPKGGCAGTLMNLLTDERFNHQC 128

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+  G+ E+    ++ +FF+E R
Sbjct: 129 EVVTGVLEEECGTLLTNFFRELR 151


>gi|229067785|ref|ZP_04201104.1| hypothetical protein bcere0025_110 [Bacillus cereus F65185]
 gi|228715338|gb|EEL67195.1| hypothetical protein bcere0025_110 [Bacillus cereus F65185]
          Length = 166

 Score =  115 bits (287), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 60/143 (41%), Positives = 83/143 (58%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  A+EEA+ A    E+P+GAV VL+ ++IS A N     +   AHAE+LAI   C+ L
Sbjct: 9   FMQLAIEEAKKAEEIQEVPIGAVIVLDGEVISVAHNLRETEQRSIAHAELLAIDEACKKL 68

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  LYVTLEPC MCA  I L+R++R+ YGAS+PKGG         T    +H  
Sbjct: 69  GTWRLEDATLYVTLEPCPMCAGGIVLSRVKRVVYGASDPKGGCAGTLMNLLTDERFNHQC 128

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+  G+ E+    ++  FF+E R
Sbjct: 129 EVVSGVLEEECGTLLTSFFRELR 151


>gi|254830845|ref|ZP_05235500.1| hypothetical protein Lmon1_05774 [Listeria monocytogenes 10403S]
          Length = 156

 Score =  115 bits (287), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 59/143 (41%), Positives = 86/143 (60%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  ALEEA+ A    E+P+GAV VL+ +II RA N     ++   HAE+LAI+  C+  
Sbjct: 6   FMQQALEEAEKARDIGEVPIGAVVVLDGEIIGRAHNLRETSQNAVTHAELLAIQDACKHQ 65

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
           +   L   +LYVTLEPC MC+ AI L+RI ++YYGA +PK G   +          +H+ 
Sbjct: 66  NSWRLSGAELYVTLEPCPMCSGAILLSRIEKVYYGAKDPKAGTAGSLMNLLQDDRFNHTC 125

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+  G+ E  S ++++ FF+E R
Sbjct: 126 EVEAGLMESESSEMLKSFFQELR 148


>gi|229170871|ref|ZP_04298476.1| hypothetical protein bcere0006_110 [Bacillus cereus MM3]
 gi|228612606|gb|EEK69823.1| hypothetical protein bcere0006_110 [Bacillus cereus MM3]
          Length = 166

 Score =  115 bits (287), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 59/143 (41%), Positives = 84/143 (58%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  A+EEA+ A    E+P+GAV VL+ ++IS A N     +   AHAE+LA+   C+ L
Sbjct: 9   FMQLAIEEAKKAEAIQEVPIGAVIVLDGEVISVAHNLRETEQRSIAHAELLALDEACKKL 68

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  LYVTLEPC MCA  I L+R++R+ YGAS+PKGG         T    +H  
Sbjct: 69  GTWRLEDATLYVTLEPCPMCAGGIVLSRVKRVVYGASDPKGGCAGTLMNLLTDERFNHQC 128

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+  G+ E+    ++ +FF+E R
Sbjct: 129 EVVAGVLEEECGTLLTNFFRELR 151


>gi|39938589|ref|NP_950355.1| cytosine/adenosine deaminase [Onion yellows phytoplasma OY-M]
 gi|39721698|dbj|BAD04188.1| cytosine/adenosine deaminase [Onion yellows phytoplasma OY-M]
          Length = 161

 Score =  115 bits (287), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 64/149 (42%), Positives = 84/149 (56%), Gaps = 11/149 (7%)

Query: 6   VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
            FM  AL+EAQ A L+ E+P+GAVAVLN KII+RA N     K    HAE LA+    + 
Sbjct: 10  FFMKEALKEAQKAYLKEEVPIGAVAVLNQKIIARAHNNRNTKKLFFGHAEFLALMKAGKK 69

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           ++   L +V LYVTLEPC MC  AI  A I+ LYYG S      +E    F  +++  + 
Sbjct: 70  INSRFLNDVSLYVTLEPCLMCTGAIIQAGIKNLYYGTS------MEKSYSFNDMSSIQNM 123

Query: 126 P-----EIYPGISEQRSRQIIQDFFKERR 149
           P      I  G+  Q S Q++Q FF+E R
Sbjct: 124 PFMDKLNIQSGLLAQESMQLLQKFFQELR 152


>gi|150009165|ref|YP_001303908.1| putative cytosine/adenosine deaminase [Parabacteroides distasonis
           ATCC 8503]
 gi|255015772|ref|ZP_05287898.1| putative cytosine/adenosine deaminase [Bacteroides sp. 2_1_7]
 gi|256841721|ref|ZP_05547227.1| cytosine/adenosine deaminase [Parabacteroides sp. D13]
 gi|298377094|ref|ZP_06987048.1| cytidine/deoxycytidylate deaminase family protein [Bacteroides sp.
           3_1_19]
 gi|149937589|gb|ABR44286.1| putative cytosine/adenosine deaminase [Parabacteroides distasonis
           ATCC 8503]
 gi|256736615|gb|EEU49943.1| cytosine/adenosine deaminase [Parabacteroides sp. D13]
 gi|298266078|gb|EFI07737.1| cytidine/deoxycytidylate deaminase family protein [Bacteroides sp.
           3_1_19]
          Length = 146

 Score =  115 bits (287), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 66/143 (46%), Positives = 85/143 (59%), Gaps = 5/143 (3%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  AL EA+ AA   E+PVGAV V NN+II+RA N+   L DVTAHAE+LAI     +L
Sbjct: 9   FMKQALVEARAAASEGEVPVGAVIVCNNQIIARAHNQTECLNDVTAHAEMLAITAAAGVL 68

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
             + L    LYVT+EPC MCA AI  A++  + YGAS+ K G  +   Q +     H   
Sbjct: 69  GAKYLTNCSLYVTVEPCIMCAGAIGWAQLSTIVYGASDDKRGFSKFAPQAF-----HPKA 123

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
            I  GI E+   + +Q FFK+RR
Sbjct: 124 IIKKGILEKECAEEMQRFFKQRR 146


>gi|42779100|ref|NP_976347.1| cytidine/deoxycytidylate deaminase zinc-binding domain-containing
           protein [Bacillus cereus ATCC 10987]
 gi|42735015|gb|AAS38955.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein
           [Bacillus cereus ATCC 10987]
          Length = 166

 Score =  115 bits (287), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 60/143 (41%), Positives = 83/143 (58%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  A+EEA+ A    E+P+GAV VLN ++IS A N     +   AHAE+LAI   C+ L
Sbjct: 9   FMQLAIEEAKKAEAIQEVPIGAVIVLNGEVISVAHNLRETEQRSIAHAELLAIDEACKKL 68

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  LYVTLEPC MCA  I L+R++R+ YGAS+PKGG         T    +H  
Sbjct: 69  GTWRLEDATLYVTLEPCPMCAGGIVLSRVKRVVYGASDPKGGCAGTLMNLLTDERFNHQC 128

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+  G+ E+    ++ +FF+  R
Sbjct: 129 EVVAGVLEEECGTLLTNFFRALR 151


>gi|259502690|ref|ZP_05745592.1| tRNA-specific adenosine deaminase [Lactobacillus antri DSM 16041]
 gi|259169335|gb|EEW53830.1| tRNA-specific adenosine deaminase [Lactobacillus antri DSM 16041]
          Length = 173

 Score =  115 bits (287), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 62/139 (44%), Positives = 85/139 (61%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM+ A+ EA+ AAL NE+P+GAV V + +II R  N     +DVT HAE+LAI   C  L
Sbjct: 17  FMAAAVAEARQAALLNEVPIGAVVVKDQQIIGRGHNMREHFQDVTYHAEMLAIMEACERL 76

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L   DLYVTLEPC MC+ AI  ARI  LYYGA++PK G +E+          +H  
Sbjct: 77  HSWRLEGCDLYVTLEPCIMCSGAIINARIANLYYGAADPKAGAVESLYHLMNDPRLNHQV 136

Query: 127 EIYPGISEQRSRQIIQDFF 145
           ++  G+ ++   Q+++DFF
Sbjct: 137 QVASGVMQEECSQMLKDFF 155


>gi|315284032|ref|ZP_07872011.1| tRNA-specific adenosine deaminase [Listeria marthii FSL S4-120]
 gi|313612324|gb|EFR86487.1| tRNA-specific adenosine deaminase [Listeria marthii FSL S4-120]
          Length = 156

 Score =  115 bits (287), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 59/143 (41%), Positives = 86/143 (60%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  ALEEA+ A    E+P+GAV VL+ +II RA N     ++   HAE+LAI+  C+  
Sbjct: 6   FMQQALEEAEKAREIGEVPIGAVVVLDGEIIGRAHNLRETSQNAVTHAELLAIQDACKHQ 65

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
           +   L   +LYVTLEPC MC+ AI L+RI ++YYGA +PK G   +          +H+ 
Sbjct: 66  NSWRLSGAELYVTLEPCPMCSGAILLSRIEKVYYGAKDPKAGTAGSLMNLLQDDRFNHTC 125

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+  G+ E  S ++++ FF+E R
Sbjct: 126 EVEAGLMEAESSEMLKSFFQELR 148


>gi|257871097|ref|ZP_05650750.1| cytidine/deoxycytidylate deaminase [Enterococcus gallinarum EG2]
 gi|257805261|gb|EEV34083.1| cytidine/deoxycytidylate deaminase [Enterococcus gallinarum EG2]
          Length = 173

 Score =  115 bits (287), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 57/143 (39%), Positives = 84/143 (58%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  AL+EAQ A    E+P+GAV VL  +II R  N   + ++ TAHAE+ AI+  C+ +
Sbjct: 20  FMREALKEAQKAEAIAEVPIGAVVVLEGQIIGRGHNLREKQQEATAHAEMFAIQQACQAI 79

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  L+VTLEPC MC+ A+ LAR+  +Y+GA +PKGG   +          +H  
Sbjct: 80  ESWRLEQAQLFVTLEPCPMCSGAMMLARVEEVYFGAYDPKGGAAGSLLNLLEDERFNHWS 139

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
            +  GI E+   Q+++DFF+  R
Sbjct: 140 YVEGGILEEACGQVLKDFFRALR 162


>gi|217966083|ref|YP_002351761.1| tRNA-specific adenosine deaminase [Listeria monocytogenes HCC23]
 gi|217335353|gb|ACK41147.1| tRNA-specific adenosine deaminase [Listeria monocytogenes HCC23]
 gi|307572307|emb|CAR85486.1| tRNA-specific adenosine deaminase, putative [Listeria monocytogenes
           L99]
          Length = 156

 Score =  115 bits (287), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 58/143 (40%), Positives = 87/143 (60%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  ALEEA+ A    E+P+GAV VL+ +II RA N     ++   HAE+LAI+  C+  
Sbjct: 6   FMQQALEEAEKAREIGEVPIGAVVVLDGEIIGRAHNLRETSQNAVTHAELLAIQDACKHQ 65

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
           +   L   +LYVTLEPC MC+ AI L+RI ++YYGA +PK G   +          +H+ 
Sbjct: 66  NSWRLSGAELYVTLEPCPMCSGAILLSRIEKVYYGAKDPKAGTAGSLMNLLQDDRFNHTC 125

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+  G+ E+ S ++++ FF++ R
Sbjct: 126 EVEAGLMEKESSEMLKSFFQDLR 148


>gi|46908898|ref|YP_015287.1| cytidine/deoxycytidylate deaminase family protein [Listeria
           monocytogenes serotype 4b str. F2365]
 gi|254851976|ref|ZP_05241324.1| cytidine/deoxycytidylate deaminase [Listeria monocytogenes FSL
           R2-503]
 gi|254931009|ref|ZP_05264368.1| cytidine/deoxycytidylate deaminase [Listeria monocytogenes HPB2262]
 gi|254994111|ref|ZP_05276301.1| cytidine/deoxycytidylate deaminase family protein [Listeria
           monocytogenes FSL J2-064]
 gi|300763522|ref|ZP_07073520.1| cytidine/deoxycytidylate deaminase family protein [Listeria
           monocytogenes FSL N1-017]
 gi|46882171|gb|AAT05464.1| cytidine/deoxycytidylate deaminase family protein [Listeria
           monocytogenes serotype 4b str. F2365]
 gi|258605274|gb|EEW17882.1| cytidine/deoxycytidylate deaminase [Listeria monocytogenes FSL
           R2-503]
 gi|293582555|gb|EFF94587.1| cytidine/deoxycytidylate deaminase [Listeria monocytogenes HPB2262]
 gi|300515799|gb|EFK42848.1| cytidine/deoxycytidylate deaminase family protein [Listeria
           monocytogenes FSL N1-017]
 gi|328469576|gb|EGF40517.1| cytidine/deoxycytidylate deaminase family protein [Listeria
           monocytogenes 220]
 gi|332313149|gb|EGJ26244.1| tRNA-specific adenosine deaminase [Listeria monocytogenes str.
           Scott A]
          Length = 156

 Score =  115 bits (287), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 58/143 (40%), Positives = 87/143 (60%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  ALEEA+ A    E+P+GAV VL+ +II RA N     ++   HAE+LAI+  C+  
Sbjct: 6   FMQQALEEAEKARDIGEVPIGAVVVLDGEIIGRAHNLRETSQNAVTHAELLAIQDACKHQ 65

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
           +   L   +LYVTLEPC MC+ AI L+RI ++YYGA +PK G   +          +H+ 
Sbjct: 66  NSWRLSGAELYVTLEPCPMCSGAILLSRIEKVYYGAKDPKAGTAGSLMNLLQDDRFNHTC 125

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+  G+ E+ S ++++ FF++ R
Sbjct: 126 EVEAGLMEKESSEMLKSFFQDLR 148


>gi|301051758|ref|YP_003789969.1| putative cytidine/deoxycytidylate deaminase family protein
           [Bacillus anthracis CI]
 gi|300373927|gb|ADK02831.1| probable cytidine/deoxycytidylate deaminase family protein
           [Bacillus cereus biovar anthracis str. CI]
          Length = 166

 Score =  115 bits (287), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 60/143 (41%), Positives = 82/143 (57%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  A+EEA+ A    E+P+GAV VLN ++IS A N     +   AHAE+LAI   C+ L
Sbjct: 9   FMQLAIEEAKKAEAIQEVPIGAVIVLNGEVISAAHNLRETEQRSIAHAELLAIDEACKKL 68

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  LYVTLEPC MCA  I L+R+ R+ YGA +PKGG         T    +H  
Sbjct: 69  GTWRLEDATLYVTLEPCPMCAGGIVLSRVNRVVYGAGDPKGGCAGTLMNLLTDERFNHQC 128

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+  G+ E+    ++ +FF+E R
Sbjct: 129 EVVAGVLEEECGTLLTNFFRELR 151


>gi|91201429|emb|CAJ74489.1| conserved hypothetical protein [Candidatus Kuenenia
           stuttgartiensis]
          Length = 158

 Score =  115 bits (287), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 62/141 (43%), Positives = 82/141 (58%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  A++EA+ AA  NE+PVGAV V +N+II+RA N+   LKD TAHAE++AI  G   L
Sbjct: 13  FMRQAIKEAEKAADINEVPVGAVIVYDNRIIARAHNQREMLKDPTAHAEMIAITQGAEYL 72

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L    +YVTLEPC MCA A+  +RI +L YGA + K G   +          +H  
Sbjct: 73  QNWRLTGSTIYVTLEPCVMCAGALVQSRIDKLVYGAVDKKAGACVSVMNLVQNTKLNHRL 132

Query: 127 EIYPGISEQRSRQIIQDFFKE 147
           E+ P I     R I++ FF E
Sbjct: 133 EVIPDILADECRDILKRFFLE 153


>gi|294674558|ref|YP_003575174.1| cytidine/deoxycytidylate deaminase zinc-binding domain-containing
           protein [Prevotella ruminicola 23]
 gi|294472670|gb|ADE82059.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein
           [Prevotella ruminicola 23]
          Length = 150

 Score =  114 bits (286), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 64/150 (42%), Positives = 87/150 (58%), Gaps = 9/150 (6%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           KK   +M  AL+EA  A    EIP+GAV V  ++++SRA N    L DVTAHAE+ AI  
Sbjct: 8   KKDERYMQMALDEAHLALEAGEIPIGAVVVCKDRVVSRAHNLTETLCDVTAHAEMQAITA 67

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA- 120
               L  + L E  LYVT+EPCTMCA AI  A+I R+ YGA + K G       ++ LA 
Sbjct: 68  AANTLGGKYLTECTLYVTVEPCTMCAGAIGWAQIPRIVYGAPDDKRG-------YHLLAP 120

Query: 121 -TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
              H   ++  G+ E   R+++Q+FFK +R
Sbjct: 121 HAFHPKAQVTQGVLEDECRELMQNFFKAKR 150


>gi|42518517|ref|NP_964447.1| hypothetical protein LJ0422 [Lactobacillus johnsonii NCC 533]
 gi|41582802|gb|AAS08413.1| hypothetical protein LJ_0422 [Lactobacillus johnsonii NCC 533]
          Length = 160

 Score =  114 bits (286), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 55/144 (38%), Positives = 88/144 (61%), Gaps = 1/144 (0%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNREL-KDVTAHAEILAIRMGCRI 65
           +M  A E+A+ A  + E+P+GAV V  +  +   G   REL +D T HAE++AIR  C+ 
Sbjct: 10  YMHLAFEQAKKAEEQGEVPIGAVVVDKDGNVIGEGYNRRELDEDATQHAEMIAIRQACKN 69

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           L+   L +  L++TLEPC MC+ AI  +R+  +YYGA +PK G   +    + +   +H 
Sbjct: 70  LNSWRLVDCSLFITLEPCPMCSGAIINSRLAEVYYGAFDPKAGAASSVIDLFKVEKFNHH 129

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
           P+IY G+   ++ Q+++DFF+E R
Sbjct: 130 PKIYGGLFRDQAAQMLKDFFREIR 153


>gi|229552943|ref|ZP_04441668.1| nucleoside deaminase [Lactobacillus rhamnosus LMS2-1]
 gi|229313687|gb|EEN79660.1| nucleoside deaminase [Lactobacillus rhamnosus LMS2-1]
          Length = 170

 Score =  114 bits (286), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 66/148 (44%), Positives = 85/148 (57%), Gaps = 6/148 (4%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           N +M  AL EA+ AA   E+P+GAV V + +II R  N     +D T HAEILAI+  CR
Sbjct: 9   NQYMIAALVEAKKAAAIGEVPIGAVVVHDQQIIGRGYNLRETTQDATQHAEILAIQAACR 68

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL---AT 121
            L    L +  L+VTLEPC MCA A+  ARI   Y+GA++PK G    GT FY L     
Sbjct: 69  QLGTWRLEDCSLFVTLEPCPMCAGAMINARIATCYFGATDPKAG--VAGT-FYNLLEDTR 125

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H   + PGI    S  ++QDFF+  R
Sbjct: 126 FNHQVAVVPGIQATASAALLQDFFRAIR 153


>gi|258540446|ref|YP_003174945.1| CMP/dCMP deaminase zinc-binding [Lactobacillus rhamnosus Lc 705]
 gi|257152122|emb|CAR91094.1| CMP/dCMP deaminase, zinc-binding [Lactobacillus rhamnosus Lc 705]
          Length = 168

 Score =  114 bits (286), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 66/148 (44%), Positives = 85/148 (57%), Gaps = 6/148 (4%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           N +M  AL EA+ AA   E+P+GAV V + +II R  N     +D T HAEILAI+  CR
Sbjct: 7   NQYMIAALVEAKKAAAIGEVPIGAVVVHDQQIIGRGYNLRETTQDATQHAEILAIQAACR 66

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL---AT 121
            L    L +  L+VTLEPC MCA A+  ARI   Y+GA++PK G    GT FY L     
Sbjct: 67  QLGTWRLEDCSLFVTLEPCPMCAGAMINARIATCYFGATDPKAG--VAGT-FYNLLEDTR 123

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H   + PGI    S  ++QDFF+  R
Sbjct: 124 FNHQVAVVPGIQATASAALLQDFFRAIR 151


>gi|134094605|ref|YP_001099680.1| tRNA-specific adenosine deaminase [Herminiimonas arsenicoxydans]
 gi|133738508|emb|CAL61553.1| tRNA-specific adenosine deaminase [Herminiimonas arsenicoxydans]
          Length = 170

 Score =  114 bits (286), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 57/149 (38%), Positives = 87/149 (58%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           + +  ++M  AL++A NA    E+PVGAV V + ++I+   N+     D TAHAEI+A+R
Sbjct: 8   VTQDEIWMRQALDQAHNAWALGEVPVGAVVVKDGQVIATGFNQPIGTHDPTAHAEIMALR 67

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
               IL    LP  +LYVTLEPC MC+ A+  AR+ R+ +GAS+PK G   +    +   
Sbjct: 68  AAATILGNYRLPGCELYVTLEPCVMCSGAMMHARLARVVFGASDPKTGACGSIVNLFEQN 127

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  ++  G+  Q    +++DFF ERR
Sbjct: 128 QLNHHTQLTGGLMAQECGALLKDFFAERR 156


>gi|329666788|gb|AEB92736.1| cytosine/adenosine deaminase [Lactobacillus johnsonii DPC 6026]
          Length = 160

 Score =  114 bits (286), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 55/144 (38%), Positives = 88/144 (61%), Gaps = 1/144 (0%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNREL-KDVTAHAEILAIRMGCRI 65
           +M  A E+A+ A  + E+P+GAV V  +  +   G   REL +D T HAE++AIR  C+ 
Sbjct: 10  YMHLAFEQAKKAEEQGEVPIGAVVVDKDGNVIGEGYNRRELDEDATQHAEMIAIRQACKK 69

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           L+   L +  L++TLEPC MC+ AI  +R+  +YYGA +PK G   +    + +   +H 
Sbjct: 70  LNSWRLVDCSLFITLEPCPMCSGAIINSRLAEVYYGAFDPKAGAAGSVIDLFKVEKFNHH 129

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
           P+IY G+   ++ Q+++DFF+E R
Sbjct: 130 PKIYGGLFRDQASQMLKDFFREIR 153


>gi|304383698|ref|ZP_07366157.1| tRNA-specific adenosine deaminase [Prevotella marshii DSM 16973]
 gi|304335222|gb|EFM01493.1| tRNA-specific adenosine deaminase [Prevotella marshii DSM 16973]
          Length = 160

 Score =  114 bits (286), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 64/148 (43%), Positives = 83/148 (56%), Gaps = 5/148 (3%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           K    FM  AL EA+ A    EIPVGA+ V   +I+SRA N    L DVTAHAE+ AI  
Sbjct: 18  KTDEAFMRKALAEAEMAFEEGEIPVGAIIVCKGRILSRAHNLTETLHDVTAHAEMQAITA 77

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
               L  + L    LYVT+EPC MCA A++ A++ R+ YGAS+ K      G + Y    
Sbjct: 78  AADALGGKYLTGCTLYVTVEPCPMCAGALAWAQLSRIVYGASDTK-----RGYRLYAPDV 132

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            H   E+  GI  +  R+++Q FFKERR
Sbjct: 133 LHPKTEVMGGILAEECRELMQRFFKERR 160


>gi|116511524|ref|YP_808740.1| hypothetical protein LACR_0760 [Lactococcus lactis subsp. cremoris
           SK11]
 gi|116107178|gb|ABJ72318.1| tRNA-adenosine deaminase [Lactococcus lactis subsp. cremoris SK11]
          Length = 155

 Score =  114 bits (286), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 65/144 (45%), Positives = 88/144 (61%), Gaps = 2/144 (1%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKD-VTAHAEILAIRMGCRI 65
           FM+ AL+EAQ AA   E+P+G V V + +II+R  NR REL    T HAE+ AI    + 
Sbjct: 11  FMTEALKEAQKAAENEEVPIGVVIVKDGEIIARDFNR-RELDGRATHHAEVCAIEAANQA 69

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           +    L +  L+VT+EPC MCA AI LARI ++Y+GA+NPK GG  +  Q       +H 
Sbjct: 70  VGNWRLLDCALFVTIEPCVMCAGAIGLARIPQVYFGATNPKFGGTVSLYQILEDKRLNHR 129

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
            ++  GI E    +I+QDFFK RR
Sbjct: 130 VQVESGILEYECAKIMQDFFKNRR 153


>gi|47092339|ref|ZP_00230130.1| cytidine/deoxycytidylate deaminase family protein [Listeria
           monocytogenes str. 4b H7858]
 gi|226225270|ref|YP_002759377.1| hypothetical protein Lm4b_02693 [Listeria monocytogenes Clip81459]
 gi|254824916|ref|ZP_05229917.1| cytidine/deoxycytidylate deaminase [Listeria monocytogenes FSL
           J1-194]
 gi|255520888|ref|ZP_05388125.1| hypothetical protein LmonocFSL_06656 [Listeria monocytogenes FSL
           J1-175]
 gi|47019318|gb|EAL10060.1| cytidine/deoxycytidylate deaminase family protein [Listeria
           monocytogenes str. 4b H7858]
 gi|225877732|emb|CAS06447.1| Conserved hypothetical proteins [Listeria monocytogenes serotype 4b
           str. CLIP 80459]
 gi|293594156|gb|EFG01917.1| cytidine/deoxycytidylate deaminase [Listeria monocytogenes FSL
           J1-194]
 gi|328468199|gb|EGF39205.1| hypothetical protein LM1816_02662 [Listeria monocytogenes 1816]
          Length = 156

 Score =  114 bits (286), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 58/143 (40%), Positives = 87/143 (60%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  ALEEA+ A    E+P+GAV VL+ +II RA N     ++   HAE+LAI+  C+  
Sbjct: 6   FMQQALEEAEKARDIGEVPIGAVVVLDGEIIGRAHNLRETSQNAVTHAELLAIQDACKHQ 65

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
           +   L   +LYVTLEPC MC+ AI L+RI ++YYGA +PK G   +          +H+ 
Sbjct: 66  NSWRLSGAELYVTLEPCPMCSGAILLSRIEKVYYGAKDPKAGTAGSLMNLLQDDRFNHTC 125

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+  G+ E+ S ++++ FF++ R
Sbjct: 126 EVEAGLMEKESSEMLRSFFQDLR 148


>gi|262384051|ref|ZP_06077187.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
 gi|301310955|ref|ZP_07216884.1| cytidine/deoxycytidylate deaminase family protein [Bacteroides sp.
           20_3]
 gi|262294949|gb|EEY82881.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
 gi|300831018|gb|EFK61659.1| cytidine/deoxycytidylate deaminase family protein [Bacteroides sp.
           20_3]
          Length = 146

 Score =  114 bits (286), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 65/143 (45%), Positives = 85/143 (59%), Gaps = 5/143 (3%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  AL EA+ AA   E+PVGAV + NN+II+RA N+   L DVTAHAE+LAI     +L
Sbjct: 9   FMKQALVEARAAASEGEVPVGAVIICNNQIIARAHNQTECLNDVTAHAEMLAITAAAGVL 68

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
             + L    LYVT+EPC MCA AI  A++  + YGAS+ K G  +   Q +     H   
Sbjct: 69  GAKYLTNCSLYVTVEPCIMCAGAIGWAQLSTIVYGASDDKRGFSKFAPQAF-----HPKA 123

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
            I  GI E+   + +Q FFK+RR
Sbjct: 124 IIKKGILEKECAEEMQRFFKQRR 146


>gi|167771010|ref|ZP_02443063.1| hypothetical protein ANACOL_02364 [Anaerotruncus colihominis DSM
           17241]
 gi|167666680|gb|EDS10810.1| hypothetical protein ANACOL_02364 [Anaerotruncus colihominis DSM
           17241]
          Length = 151

 Score =  114 bits (285), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 65/145 (44%), Positives = 84/145 (57%), Gaps = 1/145 (0%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           N FM  AL  A  AA R E+PVGAV V + +I+    NR    K+  AHAE+ AI   CR
Sbjct: 4   NDFMGEALRLAGCAAERGEVPVGAVVVCDGQIVGTGFNRRETGKNALAHAELEAIDAACR 63

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
            L    L   +LYVTLEPC MCA AI  ARIRRL +GA +PK G   + + F  LA  +H
Sbjct: 64  RLGGWRLHRCELYVTLEPCPMCAGAIINARIRRLVFGARDPKSGCFGSVSDFNALAF-NH 122

Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149
            P++  G+  +   QI+  FF++ R
Sbjct: 123 KPQVVCGVRGEECAQILSAFFQKLR 147


>gi|94310515|ref|YP_583725.1| tRNA-adenosine deaminase [Cupriavidus metallidurans CH34]
 gi|93354367|gb|ABF08456.1| tRNA-specific adenosine deaminase [Cupriavidus metallidurans CH34]
          Length = 189

 Score =  114 bits (285), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 55/144 (38%), Positives = 87/144 (60%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           ++   +M+ AL+EA+ A    E+PVGAV V ++KII+R  N      D +AHAE+ A+R 
Sbjct: 12  ERDRFYMAAALDEARLAEAAGEVPVGAVVVWDDKIIARGHNLPIRSVDPSAHAEMQALRA 71

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
             ++L    +PE ++YVTLEPC MC+ AI  AR+R + +GA++PK G   +    +  AT
Sbjct: 72  AAKVLGNYRMPECEIYVTLEPCPMCSGAILHARLRHVVFGATDPKTGAAGSVVDLFAQAT 131

Query: 122 CHHSPEIYPGISEQRSRQIIQDFF 145
            +H   +  G+      Q+++DFF
Sbjct: 132 LNHQTTLTRGVMADECGQLLRDFF 155


>gi|83944514|ref|ZP_00956966.1| cytidine and deoxycytidylate deaminase family protein
           [Sulfitobacter sp. EE-36]
 gi|83844620|gb|EAP82505.1| cytidine and deoxycytidylate deaminase family protein
           [Sulfitobacter sp. EE-36]
          Length = 151

 Score =  114 bits (285), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 77/144 (53%), Positives = 101/144 (70%), Gaps = 1/144 (0%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           +MS ALEEA+ AA R E+PVGAV V  + +++++AGNR REL D TAHAE+LAIR  C  
Sbjct: 6   YMSQALEEARAAAARGEVPVGAVIVAPDGQVVAQAGNRTRELNDPTAHAEVLAIRAACAA 65

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
              E L    LYVTLEPC MCAAAIS AR+ RLYYGAS+PK GG+  G + ++   CHH+
Sbjct: 66  AGSERLGGHALYVTLEPCAMCAAAISAARVARLYYGASDPKSGGVAQGARVFSHEQCHHA 125

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
           P++Y  I+   S  +++ FF E+R
Sbjct: 126 PDVYDAIAAPESEDLLKAFFAEKR 149


>gi|73541535|ref|YP_296055.1| tRNA-adenosine deaminase [Ralstonia eutropha JMP134]
 gi|72118948|gb|AAZ61211.1| tRNA-adenosine deaminase [Ralstonia eutropha JMP134]
          Length = 177

 Score =  114 bits (285), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 57/143 (39%), Positives = 85/143 (59%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           ++  A++EA+ A    E+PVGAV V N+ II+R  N   +  D +AHAE+ A+R   ++L
Sbjct: 16  YLRAAMDEARLAEAAGEVPVGAVVVWNDAIIARGHNLPIKSMDPSAHAEMQALRAAAQVL 75

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               +PE +LYVTLEPC MC+ AI  AR+R + +GAS+PK G   +    +  A  +H  
Sbjct: 76  GNYRMPECELYVTLEPCAMCSGAILHARLRHVVFGASDPKTGAAGSVVNLFEQAQLNHQT 135

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
            I  G+      Q+++DFF  RR
Sbjct: 136 TITGGVLADECGQMLKDFFGARR 158


>gi|268318938|ref|YP_003292594.1| hypothetical protein FI9785_445 [Lactobacillus johnsonii FI9785]
 gi|262397313|emb|CAX66327.1| conserved hypothetical proteins [Lactobacillus johnsonii FI9785]
          Length = 160

 Score =  114 bits (285), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 55/144 (38%), Positives = 88/144 (61%), Gaps = 1/144 (0%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNREL-KDVTAHAEILAIRMGCRI 65
           +M  A E+A+ A  + E+P+GAV V  +  +   G   REL +D T HAE++AIR  C+ 
Sbjct: 10  YMHLAFEQAKKAEEQGEVPIGAVVVDKDGNVIGEGYNRRELDEDATQHAEMIAIRQACKK 69

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           L+   L +  L++TLEPC MC+ AI  +R+  +YYGA +PK G   +    + +   +H 
Sbjct: 70  LNSWRLVDCSLFITLEPCPMCSGAIINSRLAEVYYGAFDPKAGAAGSVIDLFKVEKFNHH 129

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
           P+IY G+   ++ Q+++DFF+E R
Sbjct: 130 PKIYGGLFRNQAAQMLKDFFREIR 153


>gi|241895205|ref|ZP_04782501.1| tRNA-adenosine deaminase [Weissella paramesenteroides ATCC 33313]
 gi|241871511|gb|EER75262.1| tRNA-adenosine deaminase [Weissella paramesenteroides ATCC 33313]
          Length = 175

 Score =  114 bits (285), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 55/145 (37%), Positives = 83/145 (57%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           + FM  AL EA+ AA+  E+P+GAV V + +++SRA N    ++D + HAE  AI    R
Sbjct: 11  DYFMGLALAEARKAAMIGEVPIGAVVVQDGQVVSRAFNLREHMQDGSQHAEYQAIIEANR 70

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
            L    LP+  L+VTLEPC MCA  I   R+  +YYGA +PK GG+ +  +  T    +H
Sbjct: 71  QLHSWRLPDAQLFVTLEPCIMCAGLIQQTRLTDVYYGADDPKAGGVTSMYELLTDERLNH 130

Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149
              ++ G+    +  +++ FFK  R
Sbjct: 131 QVNVHAGVRADEASSLLKQFFKAVR 155


>gi|227888770|ref|ZP_04006575.1| nucleoside deaminase [Lactobacillus johnsonii ATCC 33200]
 gi|227850607|gb|EEJ60693.1| nucleoside deaminase [Lactobacillus johnsonii ATCC 33200]
          Length = 160

 Score =  114 bits (284), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 55/144 (38%), Positives = 88/144 (61%), Gaps = 1/144 (0%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNREL-KDVTAHAEILAIRMGCRI 65
           +M  A E+A+ A  + E+P+GAV V  +  +   G   REL +D T HAE++AIR  C+ 
Sbjct: 10  YMHLAFEQAKKAEEQGEVPIGAVVVDKDGNVIGEGYNRRELDEDATQHAEMIAIRQACKK 69

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           L+   L +  L++TLEPC MC+ AI  +R+  +YYGA +PK G   +    + +   +H 
Sbjct: 70  LNSWRLVDCSLFITLEPCPMCSGAIINSRLVEVYYGAFDPKAGAAGSVIDLFKVEKFNHH 129

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
           P+IY G+   ++ Q+++DFF+E R
Sbjct: 130 PKIYGGLFRDQAAQMLKDFFREIR 153


>gi|88801642|ref|ZP_01117170.1| putative cytosine/adenosine deaminase [Polaribacter irgensii 23-P]
 gi|88782300|gb|EAR13477.1| putative cytosine/adenosine deaminase [Polaribacter irgensii 23-P]
          Length = 149

 Score =  114 bits (284), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 66/144 (45%), Positives = 83/144 (57%), Gaps = 8/144 (5%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  A +EA+NA  + EIPVGAV VL ++II+RA N    L DVTAHAE+ A       L
Sbjct: 10  FMKKAFQEAENAFDKGEIPVGAVIVLKDQIIARAHNLTETLNDVTAHAEMQAFTSAADFL 69

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL-ATCHHS 125
             + L E  LYVTLEPC MCA A   A+I ++ YGAS P+ G       F  L  T H  
Sbjct: 70  GGKYLKECVLYVTLEPCQMCAGASYWAQIGKIVYGASEPERG-------FKNLQTTLHPK 122

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
            ++  GI E    QI++ FF E+R
Sbjct: 123 TKVIGGILENECSQILKRFFIEKR 146


>gi|303237080|ref|ZP_07323650.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Prevotella disiens FB035-09AN]
 gi|302482467|gb|EFL45492.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Prevotella disiens FB035-09AN]
          Length = 150

 Score =  114 bits (284), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 62/149 (41%), Positives = 84/149 (56%), Gaps = 5/149 (3%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +KK   +M  AL  A+ A  + E+PVGAV V  N IISRA N    L DVTAHAE+ AI 
Sbjct: 7   IKKDEYYMGRALAMAEEAFEKGEVPVGAVIVCRNHIISRAHNLTEALTDVTAHAEMQAIT 66

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
           M    L  + L +  LYVT+EPC MCA A+  ++I+R+ YG S+ K      G   +   
Sbjct: 67  MSANELGGKYLQDCTLYVTVEPCIMCAGALGWSQIKRIVYGCSDDK-----RGFSLHAPK 121

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             H    +  G+ E+  + ++Q FFKERR
Sbjct: 122 ALHPKTVVTKGVREEECKALMQRFFKERR 150


>gi|261367117|ref|ZP_05980000.1| tRNA-specific adenosine deaminase [Subdoligranulum variabile DSM
           15176]
 gi|282571240|gb|EFB76775.1| tRNA-specific adenosine deaminase [Subdoligranulum variabile DSM
           15176]
          Length = 153

 Score =  114 bits (284), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 62/146 (42%), Positives = 89/146 (60%), Gaps = 4/146 (2%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
            M  ALEEA+ AA   E+PVGAV   + +I++RA N     K+ T HAE+LAI   C+ L
Sbjct: 6   LMQVALEEARIAAALGEVPVGAVIAKDGEIVARAHNLRERGKNATYHAELLAIDAACKAL 65

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L + +L+VTLEPC MC+ AI  +R+RR+ YGA +PK G     T  + L   HH P
Sbjct: 66  GGWRLWQCELFVTLEPCPMCSGAIINSRLRRVVYGARDPKAGCCGGLTDLFALPFNHH-P 124

Query: 127 EIYPGISEQRSRQIIQDFF---KERR 149
            I  G+ ++ ++ ++QDFF   +E+R
Sbjct: 125 VIEQGLLQEDAQALLQDFFVMLREKR 150


>gi|289577296|ref|YP_003475923.1| CMP/dCMP deaminase zinc-binding protein [Thermoanaerobacter
           italicus Ab9]
 gi|289527009|gb|ADD01361.1| CMP/dCMP deaminase zinc-binding protein [Thermoanaerobacter
           italicus Ab9]
          Length = 148

 Score =  114 bits (284), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 59/145 (40%), Positives = 80/145 (55%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           N FM  A+ EA  +    E+PVGAV V +++II R  N+     DVTAHAEI+AI+  C+
Sbjct: 3   NKFMKAAILEANKSYQLREVPVGAVIVKDDQIIGRGFNQKEATNDVTAHAEIMAIKEACK 62

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
            L    L +  +YVTLEPC MCA AI  ARI+R+Y G  + K G                
Sbjct: 63  TLGSWRLDDCSIYVTLEPCPMCAGAILEARIKRVYIGTESDKSGAAGTVINLLNNPDLGS 122

Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149
             E+Y GI E   + ++++FFK  R
Sbjct: 123 KTEVYFGIMEDECKMLLENFFKTLR 147


>gi|163745925|ref|ZP_02153284.1| cytidine and deoxycytidylate deaminase family protein [Oceanibulbus
           indolifex HEL-45]
 gi|161380670|gb|EDQ05080.1| cytidine and deoxycytidylate deaminase family protein [Oceanibulbus
           indolifex HEL-45]
          Length = 145

 Score =  114 bits (284), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 59/130 (45%), Positives = 85/130 (65%), Gaps = 1/130 (0%)

Query: 21  RNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVT 79
           R E+PVGAV V    +I++ AGN  R   D TAHAE+LA+R  C  +  E L    LYVT
Sbjct: 14  RGEVPVGAVVVSPAGQIVAAAGNETRARNDPTAHAEMLALRAACAAVGSERLIGHALYVT 73

Query: 80  LEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139
           LEPC MCA AI+ AR+ RL+YGA++PK GG+  G + ++   CHH P+++ GI+ + +  
Sbjct: 74  LEPCAMCAGAIAAARVERLFYGAADPKSGGVAQGARVFSHPQCHHVPQVFDGIAGREAED 133

Query: 140 IIQDFFKERR 149
           ++  FF+ +R
Sbjct: 134 LLIKFFQAKR 143


>gi|153006601|ref|YP_001380926.1| CMP/dCMP deaminase [Anaeromyxobacter sp. Fw109-5]
 gi|152030174|gb|ABS27942.1| CMP/dCMP deaminase zinc-binding [Anaeromyxobacter sp. Fw109-5]
          Length = 150

 Score =  114 bits (284), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 60/142 (42%), Positives = 82/142 (57%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  AL  A+ AA R E+PVGAVAV   +++ R  N      D TAHAE+LAI+   R L 
Sbjct: 1   MQEALALARGAAERGEVPVGAVAVFEGRVVGRGANAREAAHDPTAHAELLAIQDAARALG 60

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
           +  L  V +YVTLEPC MCA A+ LARI RL Y AS+PK G + +     T    +H   
Sbjct: 61  RWRLTGVTVYVTLEPCAMCAGAMVLARIDRLVYAASDPKAGAVGSLVDLSTDPRLNHRFP 120

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
           +  G+  + +  +++ FF+ RR
Sbjct: 121 VDKGLLAEEAGDLLRAFFRARR 142


>gi|290891900|ref|ZP_06554897.1| cytidine/deoxycytidylate deaminase [Listeria monocytogenes FSL
           J2-071]
 gi|290558494|gb|EFD92011.1| cytidine/deoxycytidylate deaminase [Listeria monocytogenes FSL
           J2-071]
          Length = 156

 Score =  114 bits (284), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 58/143 (40%), Positives = 86/143 (60%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  ALEEA+ A    E+P+GAV VL+ +II RA N     ++   HAE+LAI+  C+  
Sbjct: 6   FMQQALEEAEKAREIGEVPIGAVVVLDGEIIGRAHNLRETSQNAVTHAELLAIQDACKHQ 65

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
           +   L   +LYVTLEPC MC+ AI L+RI ++YYGA +PK G   +          +H+ 
Sbjct: 66  NSWRLSGAELYVTLEPCPMCSGAILLSRIEKVYYGAKDPKAGTAGSLMNLLQDDRFNHTC 125

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+  G+ E+ S ++++ FF+  R
Sbjct: 126 EVEAGLMEKESSEMLKSFFQNLR 148


>gi|125974987|ref|YP_001038897.1| tRNA-adenosine deaminase [Clostridium thermocellum ATCC 27405]
 gi|256003803|ref|ZP_05428790.1| CMP/dCMP deaminase zinc-binding [Clostridium thermocellum DSM 2360]
 gi|281418595|ref|ZP_06249614.1| CMP/dCMP deaminase zinc-binding [Clostridium thermocellum JW20]
 gi|125715212|gb|ABN53704.1| tRNA-adenosine deaminase [Clostridium thermocellum ATCC 27405]
 gi|255992141|gb|EEU02236.1| CMP/dCMP deaminase zinc-binding [Clostridium thermocellum DSM 2360]
 gi|281407679|gb|EFB37938.1| CMP/dCMP deaminase zinc-binding [Clostridium thermocellum JW20]
 gi|316939149|gb|ADU73183.1| CMP/dCMP deaminase zinc-binding protein [Clostridium thermocellum
           DSM 1313]
          Length = 161

 Score =  114 bits (284), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 61/143 (42%), Positives = 83/143 (58%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  AL+EA  A  +NE P+GAV V +  II+R  N+     D T HAE+  IR  C  L
Sbjct: 11  FMREALKEAYKAYGKNETPIGAVMVKDGSIIARGHNQKELTNDPTNHAEMAVIREACAKL 70

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L + DLYVTLEPCTMCA AI  AR+ RL+ G+ +PK G   +      +   +H  
Sbjct: 71  GTWRLNDCDLYVTLEPCTMCAGAIIQARVGRLFIGSLDPKAGAAGSVIDVLKVDAFNHRV 130

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+  GI ++   +I+++FFKE R
Sbjct: 131 EVTYGILQEECSEILKNFFKELR 153


>gi|330686241|gb|EGG97853.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Staphylococcus epidermidis VCU121]
          Length = 168

 Score =  114 bits (284), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 57/149 (38%), Positives = 88/149 (59%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M+    +M  A+EEA+ A L  E+P+GA+ V NN +I+RA N    L+  TAHAE LAI 
Sbjct: 1   METDEYYMKIAIEEAKKAELLGEVPIGAIIVKNNHVIARAHNMRETLQQPTAHAEHLAIE 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              ++L    L +  LYVTLEPC MCA  I ++RI  + YGA++PKGG   +        
Sbjct: 61  RAAKVLGSWRLEDCTLYVTLEPCVMCAGTIVMSRIPYIKYGAADPKGGCSGSLMNLLNQP 120

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  ++  G+ E++   ++++FF++ R
Sbjct: 121 DFNHRAQVESGLLEEQCGDLLRNFFRKLR 149


>gi|314937113|ref|ZP_07844460.1| cytidine/deoxycytidylate deaminase family protein [Staphylococcus
           hominis subsp. hominis C80]
 gi|313655732|gb|EFS19477.1| cytidine/deoxycytidylate deaminase family protein [Staphylococcus
           hominis subsp. hominis C80]
          Length = 163

 Score =  114 bits (284), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 58/149 (38%), Positives = 85/149 (57%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M     +M CA+EEA+ A    E+P+GAV V +N+IISRA N    L+  TAHAE LAI 
Sbjct: 1   MTNDEFYMKCAIEEAKKARQLGEVPIGAVIVKDNEIISRAHNLRETLQQPTAHAEHLAIE 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              +++    L +  LYVTLEPC MCA  + ++RI R+ YGA +PKGG   +        
Sbjct: 61  RAAKVIGSWRLEDCTLYVTLEPCVMCAGTVVMSRIPRVVYGAMDPKGGCSGSLMDLLQQP 120

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H   +  G+ E+    +++ FF++ R
Sbjct: 121 QFNHRAIVEQGVLEEECSNLLRQFFRDLR 149


>gi|308275014|emb|CBX31613.1| tRNA-specific adenosine deaminase [uncultured Desulfobacterium sp.]
          Length = 156

 Score =  114 bits (284), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 59/150 (39%), Positives = 88/150 (58%), Gaps = 1/150 (0%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAI 59
           M +   +M  A++EA+ A    E+P+GA+ V    +++S A N    L D  AHAEILA+
Sbjct: 5   MNEHEAYMELAIKEAKKAGQNCEVPIGAILVDEKGQVVSLAHNSTITLCDPCAHAEILAL 64

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
           R  C I+    L  + +YVT+EPC MC  AI  AR+++L +GA +PK G   +   F   
Sbjct: 65  RNACSIVGNYRLLNMTIYVTIEPCIMCMGAIIHARLKKLVFGAYDPKWGAAGSLYNFAND 124

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
              +H  EI PGI E+  + ++QDFFK++R
Sbjct: 125 NRLNHKTEIIPGICEKECKDLMQDFFKKKR 154


>gi|254827285|ref|ZP_05231972.1| cytidine/deoxycytidylate deaminase [Listeria monocytogenes FSL
           N3-165]
 gi|258599666|gb|EEW12991.1| cytidine/deoxycytidylate deaminase [Listeria monocytogenes FSL
           N3-165]
          Length = 156

 Score =  114 bits (284), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 58/143 (40%), Positives = 86/143 (60%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  ALEEA+ A    E+P+GAV VL+ +II RA N     ++   HAE+LAI+  C+  
Sbjct: 6   FMQQALEEAEKARDIGEVPIGAVVVLDGEIIGRAHNLRETSQNAVTHAELLAIQDACKHQ 65

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
           +   L   +LYVTLEPC MC+ AI L+RI ++YYGA +PK G   +          +H+ 
Sbjct: 66  NSWRLSGAELYVTLEPCPMCSGAILLSRIEKVYYGAKDPKAGTAGSLMNLLQDDRFNHTC 125

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+  G+ E+ S ++++ FF+  R
Sbjct: 126 EVEAGLMEKESSEMLKSFFQNLR 148


>gi|330998189|ref|ZP_08322015.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Paraprevotella xylaniphila YIT 11841]
 gi|329568881|gb|EGG50679.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Paraprevotella xylaniphila YIT 11841]
          Length = 144

 Score =  114 bits (284), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 60/149 (40%), Positives = 83/149 (55%), Gaps = 5/149 (3%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M     +M  ALEEA+ A   +EIPVGAV V  ++I++RA N    L D TAHAE+  I 
Sbjct: 1   MADDAFYMKKALEEARRAYDEDEIPVGAVVVCGDRILARAHNLTETLTDATAHAEMQVIT 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
                L  + L E  LYVTLEPC MCA AI  A+++RL YGA++ K      G + +   
Sbjct: 61  AAANALGGKYLNECTLYVTLEPCVMCAGAIGWAQVKRLVYGATDEK-----RGYKMFAPQ 115

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             H   E+  G+    +  +++DFFK +R
Sbjct: 116 AIHPRTEVVSGVMADEAVALLKDFFKGKR 144


>gi|325954716|ref|YP_004238376.1| CMP/dCMP deaminase zinc-binding protein [Weeksella virosa DSM
           16922]
 gi|323437334|gb|ADX67798.1| CMP/dCMP deaminase zinc-binding protein [Weeksella virosa DSM
           16922]
          Length = 146

 Score =  114 bits (284), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 63/143 (44%), Positives = 83/143 (58%), Gaps = 6/143 (4%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  AL+EAQ A  R+EIPVGA+ V  NKII++  N    L DVTAHAE+ AI      L
Sbjct: 10  FMRKALQEAQVAFDRDEIPVGALIVSQNKIIAKTHNLTETLTDVTAHAEMQAITSAANYL 69

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
             + L +  LYVTLEPC MCA A+  ++I R+  GAS+ K G          L   H   
Sbjct: 70  GGKYLKDCTLYVTLEPCVMCAGALYWSQISRIVIGASDEKRGFRSQ------LVKLHPKT 123

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           +I  G+  + S ++IQ FFK++R
Sbjct: 124 QITEGVLAKESTELIQKFFKDKR 146


>gi|324324011|gb|ADY19271.1| cytidine/deoxycytidylate deaminase zinc-binding domain-containing
           protein [Bacillus thuringiensis serovar finitimus
           YBT-020]
          Length = 166

 Score =  113 bits (283), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 59/143 (41%), Positives = 83/143 (58%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  A+EEA+ A    E+P+GAV VL+ ++IS A N     +   AHAE+LAI   C+ L
Sbjct: 9   FMQLAIEEAKKAEAIQEVPIGAVIVLDGEVISVAHNLRETEQRSIAHAELLAIDEACKKL 68

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  LYVTLEPC MCA  I L+R++R+ YGAS+PKGG         T    +H  
Sbjct: 69  GTWRLEDATLYVTLEPCPMCAGGIVLSRVKRVVYGASDPKGGCAGTLMNLLTDERFNHQC 128

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+  G+ E+    ++ +FF+  R
Sbjct: 129 EVVAGVLEEECGTLLTNFFRALR 151


>gi|228475284|ref|ZP_04060009.1| tRNA-specific adenosine deaminase [Staphylococcus hominis SK119]
 gi|228270749|gb|EEK12158.1| tRNA-specific adenosine deaminase [Staphylococcus hominis SK119]
          Length = 162

 Score =  113 bits (283), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 58/149 (38%), Positives = 84/149 (56%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M     +M CA+EEA+ A    E+P+GAV V +N IISRA N    L+  TAHAE LAI 
Sbjct: 1   MTNDEFYMKCAIEEAKKARQLGEVPIGAVIVKDNDIISRAHNLRETLQQPTAHAEHLAIE 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              +++    L +  LYVTLEPC MCA  + ++RI R+ YGA +PKGG   +        
Sbjct: 61  RAAKVIGSWRLEDCTLYVTLEPCVMCAGTVVMSRIPRVVYGAMDPKGGCSGSLMDLLQQP 120

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H   +  G+ E+    +++ FF++ R
Sbjct: 121 QFNHHAIVEQGVLEEECSNLLRQFFRDLR 149


>gi|229194412|ref|ZP_04321217.1| hypothetical protein bcere0001_100 [Bacillus cereus m1293]
 gi|228589068|gb|EEK47081.1| hypothetical protein bcere0001_100 [Bacillus cereus m1293]
          Length = 166

 Score =  113 bits (283), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 59/143 (41%), Positives = 83/143 (58%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  A+EEA+ A    E+P+GAV VL+ ++IS A N     +   AHAE+LAI   C+ L
Sbjct: 9   FMQLAIEEAKKAEAIQEVPIGAVIVLDGEVISVAHNLRETEQRSIAHAELLAIDEACKKL 68

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  LYVTLEPC MCA  I L+R++R+ YGAS+PKGG         T    +H  
Sbjct: 69  GTWRLEDATLYVTLEPCPMCAGGIVLSRVKRVVYGASDPKGGCAGTLMNLLTDERFNHQC 128

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+  G+ E+    ++ +FF+  R
Sbjct: 129 EVVAGVLEEECGTLLTNFFRALR 151


>gi|311070665|ref|YP_003975588.1| tRNA specific adenosine deaminase [Bacillus atrophaeus 1942]
 gi|310871182|gb|ADP34657.1| tRNA specific adenosine deaminase [Bacillus atrophaeus 1942]
          Length = 161

 Score =  113 bits (283), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 59/149 (39%), Positives = 84/149 (56%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M K   +M  A++EA+ A    E+P+GAV V+N+ I++RA N     +   AHAE+LAI 
Sbjct: 1   MTKDEFYMLEAIKEAKKAEEIGEVPIGAVLVMNDDIVARAHNLRETEQRSIAHAEMLAID 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
             CR L    L    LYVTLEPC MCA A+ L+R+ R+ +GA +PKGG            
Sbjct: 61  EACRTLGTWRLEGASLYVTLEPCPMCAGAVVLSRVDRVVFGAFDPKGGCSGTLMNLLQEE 120

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  E+  G+ E+   Q++ DFF+  R
Sbjct: 121 RFNHQAEVVSGVLEKECGQMLSDFFRNLR 149


>gi|150387879|ref|YP_001317928.1| CMP/dCMP deaminase, zinc-binding [Alkaliphilus metalliredigens
           QYMF]
 gi|149947741|gb|ABR46269.1| CMP/dCMP deaminase, zinc-binding [Alkaliphilus metalliredigens
           QYMF]
          Length = 151

 Score =  113 bits (283), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 61/143 (42%), Positives = 81/143 (56%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +MS ALEEA+ A    E+P+GA+ +  NK+I+ A N      D TAHAEI+AI+  CR L
Sbjct: 5   YMSLALEEAKKAYELGEVPIGAIILRENKVIAAAHNLRESHHDATAHAEIIAIQAACRRL 64

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L    L+VT+EPC MCA AI  +RI R+  GA +PK G   +          +H  
Sbjct: 65  GGWRLTNSTLFVTIEPCPMCAGAILQSRIDRVVIGAMDPKAGACGSIINLLNNNQFNHQT 124

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           EI  G+ E    QI++DFFK  R
Sbjct: 125 EIVTGVLEDECSQIMKDFFKSLR 147


>gi|302334869|ref|YP_003800076.1| tRNA-adenosine deaminase [Olsenella uli DSM 7084]
 gi|301318709|gb|ADK67196.1| tRNA-adenosine deaminase [Olsenella uli DSM 7084]
          Length = 163

 Score =  113 bits (283), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 61/143 (42%), Positives = 82/143 (57%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  ALEEA  AA  +E+P+GAV V   ++I+RA NR     D +AHAE  A+    R L
Sbjct: 15  FMGLALEEACIAATEDEVPIGAVVVCGGEVIARAHNRRETDGDPSAHAEFSAMVQAARAL 74

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
            +  L    +YVTLEPC MCA  +  AR+ R  YGA++PKGG +         A  +HS 
Sbjct: 75  GRWRLTGCTVYVTLEPCLMCAGLMVNARVDRCVYGAADPKGGAVGTLYDVSDDARLNHSF 134

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
            +  G+ E    QI++DFF+ RR
Sbjct: 135 PVTAGVLEDECAQILRDFFRVRR 157


>gi|147676360|ref|YP_001210575.1| cytosine/adenosine deaminases [Pelotomaculum thermopropionicum SI]
 gi|146272457|dbj|BAF58206.1| cytosine/adenosine deaminases [Pelotomaculum thermopropionicum SI]
          Length = 156

 Score =  113 bits (283), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 63/143 (44%), Positives = 81/143 (56%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  AL EA+ A    E+PVGAV V + +II R  N    LKD TAHAEILA+R   RI+
Sbjct: 9   YMREALAEAKKAYGLGEVPVGAVVVRDGEIIGRGHNLRETLKDSTAHAEILAMREAARIV 68

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L    LY T+EPC MCA AI   R+  L YGA++PK G   +          +H  
Sbjct: 69  GDWRLNGTVLYSTIEPCAMCAGAIIQFRVATLVYGAADPKAGAAGSVIDVIGQPRFNHRV 128

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+  G+ E+  R+IIQ FF+E R
Sbjct: 129 EVVSGVLEEECREIIQKFFRELR 151


>gi|225181888|ref|ZP_03735323.1| CMP/dCMP deaminase zinc-binding [Dethiobacter alkaliphilus AHT 1]
 gi|225167402|gb|EEG76218.1| CMP/dCMP deaminase zinc-binding [Dethiobacter alkaliphilus AHT 1]
          Length = 158

 Score =  113 bits (283), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 63/146 (43%), Positives = 85/146 (58%), Gaps = 6/146 (4%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  AL+EAQ A  + EIP+GAV V +  II+R  NR  EL D TAHAEIL +R   R L
Sbjct: 6   FMREALKEAQLAFEKGEIPIGAVLVRDGNIIARDHNRREELDDPTAHAEILVLREAGRTL 65

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT---CH 123
               LP   LYVT+EPC MCA  +  AR+ R+ YGA++ K G + +    YT+      +
Sbjct: 66  GGWRLPNTTLYVTIEPCPMCAGGLVQARVARVVYGAADIKAGAVHS---LYTVTEDERLN 122

Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149
           H  E+  G+  +    I++ FF+ RR
Sbjct: 123 HRLEVTGGVLAEECADIMRTFFRSRR 148


>gi|50085441|ref|YP_046951.1| putative deaminase [Acinetobacter sp. ADP1]
 gi|49531417|emb|CAG69129.1| putative deaminase [Acinetobacter sp. ADP1]
          Length = 174

 Score =  113 bits (283), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 62/144 (43%), Positives = 81/144 (56%), Gaps = 1/144 (0%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  A E+A  AA  NE+PVGAV V  NK+I    N    L D TAHAEI AIRM C  +
Sbjct: 12  WMQLAYEQAVRAAEHNEVPVGAVIVSQNKVIGSGYNAPITLNDPTAHAEIRAIRMACESV 71

Query: 67  SQEILPE-VDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
               LPE   LYVTLEPCTMC  A+  ARI R+ +  + PK G + +  Q   +   +H 
Sbjct: 72  KNYRLPEDATLYVTLEPCTMCVGALVHARIHRVVFATTEPKAGSLVSARQLLNMGYYNHK 131

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
             I  G  + +  + + DFF++RR
Sbjct: 132 FLIEHGCMQAQCSKQLSDFFRKRR 155


>gi|326796823|ref|YP_004314643.1| CMP/dCMP deaminase zinc-binding protein [Marinomonas mediterranea
           MMB-1]
 gi|326547587|gb|ADZ92807.1| CMP/dCMP deaminase zinc-binding protein [Marinomonas mediterranea
           MMB-1]
          Length = 159

 Score =  113 bits (282), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 67/145 (46%), Positives = 88/145 (60%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           N +M  AL  A+ AA  +EIPVGA+ V N++II R  NR     D TAHAEI AIR  C 
Sbjct: 4   NDWMKAALALAEEAAQESEIPVGAIVVQNDEIIGRGFNRPITTCDPTAHAEIQAIRDACA 63

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
            ++   LP   LYVTLEPC+MCA AI  ARI ++ YGA+ PK G  E+  +F+  A  +H
Sbjct: 64  NVNNYRLPGATLYVTLEPCSMCAGAIVHARIEKVVYGATEPKSGVTESQGRFFEQAFLNH 123

Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149
             E+  G+  + + Q +  FFK RR
Sbjct: 124 KVEVVGGVLAEEASQQLTAFFKFRR 148


>gi|196228535|ref|ZP_03127402.1| CMP/dCMP deaminase zinc-binding [Chthoniobacter flavus Ellin428]
 gi|196227938|gb|EDY22441.1| CMP/dCMP deaminase zinc-binding [Chthoniobacter flavus Ellin428]
          Length = 156

 Score =  113 bits (282), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 61/149 (40%), Positives = 85/149 (57%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +     FM  AL +A+ A  + E+P+GAV V   +II+RA N+   LKD TAHAE+LAI 
Sbjct: 7   LHSDTYFMGEALRQARRAWEQEEVPIGAVIVHQGRIIARACNQVEVLKDATAHAEMLAIT 66

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
               +L    L E DLYVT EPC MCA A+   R++R+ +G  +PK G   +  Q     
Sbjct: 67  QAESVLGDWRLNECDLYVTKEPCPMCAGALVHVRMKRVVFGCPSPKDGAGGSLLQILQHP 126

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +HS EI  G+ +     ++Q FF+ERR
Sbjct: 127 KLNHSCEITTGVRQDECAAMLQAFFRERR 155


>gi|288802991|ref|ZP_06408427.1| cytidine/deoxycytidylate deaminase family protein [Prevotella
           melaninogenica D18]
 gi|302345191|ref|YP_003813544.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Prevotella melaninogenica ATCC 25845]
 gi|288334508|gb|EFC72947.1| cytidine/deoxycytidylate deaminase family protein [Prevotella
           melaninogenica D18]
 gi|302149710|gb|ADK95972.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Prevotella melaninogenica ATCC 25845]
          Length = 150

 Score =  113 bits (282), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 64/148 (43%), Positives = 84/148 (56%), Gaps = 5/148 (3%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           KK   FM  AL EA+ A    EIP+GAV V  ++II+RA N    L DVTAHAE+ AI M
Sbjct: 8   KKDLYFMQRALAEAEAAYKEGEIPIGAVVVCRDRIIARAHNLTETLNDVTAHAEMQAITM 67

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
               L  + L +  LYVT+EPC MCA AI  A+++R+ YG  + K G  E     Y    
Sbjct: 68  AANELGGKYLQDCTLYVTVEPCIMCAGAIGWAQLQRIVYGCPDEKRGYHE-----YAPKA 122

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            H    +  G+ E+  R ++Q FF+ERR
Sbjct: 123 FHPKANVTYGVMEEECRALMQRFFQERR 150


>gi|300172664|ref|YP_003771829.1| tRNA-specific adenosine deaminase [Leuconostoc gasicomitatum LMG
           18811]
 gi|299887042|emb|CBL91010.1| tRNA-specific adenosine deaminase [Leuconostoc gasicomitatum LMG
           18811]
          Length = 165

 Score =  112 bits (281), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 62/145 (42%), Positives = 83/145 (57%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           + FM  AL EA+ A    E+P+GAV V +N II+RA N     +  TAHAE+LAI    R
Sbjct: 13  DYFMQVALNEAKFAENDGEVPIGAVIVKDNVIIARAHNHREAEQMATAHAELLAIESANR 72

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
           +LS   L +  L+VTLEPC MCA AI  ARI  +YYGA + KGGG  +  Q       +H
Sbjct: 73  LLSSWRLEDTALFVTLEPCIMCAGAIINARIPSVYYGAEDSKGGGTRSLYQLLEDDRLNH 132

Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149
             +++  I       ++Q FFK+ R
Sbjct: 133 RADVHTNIRGDEGGALLQHFFKKIR 157


>gi|313112820|ref|ZP_07798467.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Faecalibacterium cf. prausnitzii KLE1255]
 gi|310624890|gb|EFQ08198.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Faecalibacterium cf. prausnitzii KLE1255]
          Length = 160

 Score =  112 bits (281), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 59/143 (41%), Positives = 86/143 (60%), Gaps = 1/143 (0%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
            M  ALEEA+ AA   E+PVGAV   N ++++ A N     K+   HAE+LAI   C+ L
Sbjct: 6   LMGLALEEARKAAALGEVPVGAVVARNGEVVAAAHNTRETEKNALHHAELLAIDAACKKL 65

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L E +L+VTLEPC MCA AI  +RIRR+ YGA++ K G   + T  + +   HH P
Sbjct: 66  GGWRLWECELFVTLEPCPMCAGAIINSRIRRVVYGAADTKAGCCGSVTDLFAMPFNHH-P 124

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
            +  G+  + +++++Q FFK+ R
Sbjct: 125 VVEQGLRAEEAQELLQAFFKDLR 147


>gi|58039265|ref|YP_191229.1| cytosine deaminase [Gluconobacter oxydans 621H]
 gi|58001679|gb|AAW60573.1| Cytosine deaminase [Gluconobacter oxydans 621H]
          Length = 168

 Score =  112 bits (281), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 58/143 (40%), Positives = 89/143 (62%), Gaps = 1/143 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  AL+ A+ AA   E+PVGAV +  +  +++ A N      D +AHAE+LA+R     L
Sbjct: 16  MQIALQAAREAASCGEVPVGAVVLAPDGNVLAVARNHVEGAHDASAHAELLAMREAATRL 75

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  L VTLEPC+MCAAAI   RI R+ +GA +PKGGG+E+G + +   +C H P
Sbjct: 76  KSPRLTDCTLVVTLEPCSMCAAAIVHFRIGRVVFGAYDPKGGGVEHGPRIFERPSCLHRP 135

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+  G+ E+ + ++++ FF++ R
Sbjct: 136 EVIGGVCEREASEMLKAFFRKLR 158


>gi|226328060|ref|ZP_03803578.1| hypothetical protein PROPEN_01951 [Proteus penneri ATCC 35198]
 gi|225203764|gb|EEG86118.1| hypothetical protein PROPEN_01951 [Proteus penneri ATCC 35198]
          Length = 176

 Score =  112 bits (281), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 60/143 (41%), Positives = 84/143 (58%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  A+E+A  A    EIPVGAV V++NKII++  N +    D TAHAEI+A+R G + L
Sbjct: 10  WMHKAIEQAHKAQEIGEIPVGAVLVVDNKIIAKGWNHSIIDNDPTAHAEIMALRKGGKHL 69

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  LY+TLEPC MCA AI  +R++R+ YGAS+ K G   +          +H  
Sbjct: 70  QNYRLLDATLYITLEPCVMCAGAIVHSRVKRVVYGASDLKTGAAGSFIDILQHPGMNHKV 129

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           EI  G+  +   Q++  FFK RR
Sbjct: 130 EITSGVLGEECSQLLSQFFKMRR 152


>gi|327312523|ref|YP_004327960.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Prevotella denticola F0289]
 gi|326945985|gb|AEA21870.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Prevotella denticola F0289]
          Length = 144

 Score =  112 bits (281), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 62/149 (41%), Positives = 83/149 (55%), Gaps = 5/149 (3%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           MK+   +M  AL+EA  A    EIPVGAV V  ++II+RA N    L DVTAHAE+ AI 
Sbjct: 1   MKRDLYYMQRALDEAGAAYREGEIPVGAVVVCRDRIIARAHNLTETLNDVTAHAEMQAIT 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
           M    L  + L +  LYVT+EPC MCA AI  A+ RR+ YG  + K      G   Y   
Sbjct: 61  MAAGELGGKYLQDCTLYVTVEPCVMCAGAIGWAQFRRIVYGCPDEK-----RGYHLYAPK 115

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             H   ++  G+  +  + ++Q FF+ERR
Sbjct: 116 ALHPRADVTYGVMGEECKALMQRFFQERR 144


>gi|85057886|ref|YP_456802.1| cytosine deaminase [Aster yellows witches'-broom phytoplasma AYWB]
 gi|42632638|gb|AAS22250.1| cytosine deaminase [Aster yellows witches'-broom phytoplasma]
 gi|84789991|gb|ABC65723.1| cytosine deaminase [Aster yellows witches'-broom phytoplasma AYWB]
          Length = 161

 Score =  112 bits (281), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 63/148 (42%), Positives = 84/148 (56%), Gaps = 11/148 (7%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  AL+EAQ A L+ E+P+GA+AVLN KII+RA N     K    HAE LA+    + +
Sbjct: 11  FMKEALKEAQKAYLKEEVPIGAIAVLNQKIIARAHNNRNTKKLFFGHAEFLALIKAGKKI 70

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
           +   L +V LYVTLEPC MC  AI  A I+ LYYG S      IE    F  +++  + P
Sbjct: 71  NSRFLNDVSLYVTLEPCLMCTGAIIQAGIKNLYYGTS------IEKSYSFNDMSSIQNMP 124

Query: 127 -----EIYPGISEQRSRQIIQDFFKERR 149
                 I  G+  Q S Q+++ FF+E R
Sbjct: 125 FMDKLNIQSGLLAQESIQLLKKFFQELR 152


>gi|258510122|ref|YP_003183556.1| CMP/dCMP deaminase zinc-binding [Alicyclobacillus acidocaldarius
           subsp. acidocaldarius DSM 446]
 gi|257476848|gb|ACV57167.1| CMP/dCMP deaminase zinc-binding [Alicyclobacillus acidocaldarius
           subsp. acidocaldarius DSM 446]
          Length = 161

 Score =  112 bits (281), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 59/137 (43%), Positives = 80/137 (58%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  ALE A+ AA   E+PVGAV V N +I+    NR    +D TAHAE+LAI    R L
Sbjct: 10  FMRRALELAEEAARWGEVPVGAVVVENGRIVGEGFNRRETWRDGTAHAEMLAIEEASRRL 69

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L    LYVTLEPC MCA AI L+R++R+ YGA++ KGG + +  +       +H+P
Sbjct: 70  GGWRLTNCVLYVTLEPCPMCAGAIVLSRVQRVVYGATDAKGGAVASKVRLLEPGLWNHAP 129

Query: 127 EIYPGISEQRSRQIIQD 143
           +I  GI      +++ D
Sbjct: 130 QITSGILADDCAKLLTD 146


>gi|16801927|ref|NP_472195.1| hypothetical protein lin2867 [Listeria innocua Clip11262]
 gi|16415402|emb|CAC98093.1| lin2867 [Listeria innocua Clip11262]
          Length = 154

 Score =  112 bits (281), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 58/145 (40%), Positives = 85/145 (58%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           + FM  ALEEA+ A    E+P+GAV VL+ +II RA N     ++   HAE+LAI   C+
Sbjct: 4   DFFMQQALEEAKKAREIGEVPIGAVVVLDGEIIGRAHNLRETTQNAVTHAELLAIEDACK 63

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
             +   L   +LYVTLEPC MC+ AI L+RI ++YYGA +PK G   +          +H
Sbjct: 64  HQNSWRLSGAELYVTLEPCPMCSGAILLSRIDKVYYGAKDPKAGTAGSLMNLLQDDRFNH 123

Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149
           + ++  G+ E  S  +++ FF+E R
Sbjct: 124 TCKVEAGLLEAESSAMLKSFFRELR 148


>gi|296111508|ref|YP_003621890.1| hypothetical protein LKI_06910 [Leuconostoc kimchii IMSNU 11154]
 gi|295833040|gb|ADG40921.1| hypothetical protein LKI_06910 [Leuconostoc kimchii IMSNU 11154]
          Length = 164

 Score =  112 bits (280), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 61/145 (42%), Positives = 84/145 (57%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           + FM  AL EAQ A    E+P+GAV V +N+II+RA N     +  TAHAE++AI     
Sbjct: 13  DYFMQVALNEAQLADEAGEVPIGAVIVKDNEIIARAHNHREAHQLATAHAELVAIESANH 72

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
           IL+   L    L+VTLEPC MCA AI  ARI  +Y+GA++ KGGG  +          +H
Sbjct: 73  ILNSWRLENTALFVTLEPCIMCAGAIINARIPTVYFGAADSKGGGTRSLYHLLEDDRLNH 132

Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149
             E++P I      +++QDFF + R
Sbjct: 133 RVEVHPDIRASEGGRLLQDFFGKIR 157


>gi|313616657|gb|EFR89453.1| tRNA-specific adenosine deaminase [Listeria innocua FSL S4-378]
          Length = 156

 Score =  112 bits (280), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 58/145 (40%), Positives = 85/145 (58%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           + FM  ALEEA+ A    E+P+GAV VL+ +II RA N     ++   HAE+LAI   C+
Sbjct: 4   DFFMQQALEEAKKAREIGEVPIGAVVVLDGEIIGRAHNLRETTQNAVTHAELLAIEDACK 63

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
             +   L   +LYVTLEPC MC+ AI L+RI ++YYGA +PK G   +          +H
Sbjct: 64  HQNSWRLSGAELYVTLEPCPMCSGAILLSRIDKVYYGAKDPKAGTAGSLMNLLQDDRFNH 123

Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149
           + ++  G+ E  S  +++ FF+E R
Sbjct: 124 TCKVEAGLLEAESSAMLKSFFRELR 148


>gi|227529514|ref|ZP_03959563.1| tRNA-adenosine deaminase [Lactobacillus vaginalis ATCC 49540]
 gi|227350599|gb|EEJ40890.1| tRNA-adenosine deaminase [Lactobacillus vaginalis ATCC 49540]
          Length = 173

 Score =  112 bits (280), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 59/140 (42%), Positives = 85/140 (60%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  A+ EA+ AAL +E+P+GAV     KII R  N   + +DVT HAE+LAI   C  L
Sbjct: 15  FMRAAIAEAKKAALLDEVPIGAVVTYQGKIIGRGHNMREKFQDVTYHAEMLAIMEACSYL 74

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L + DLYVTLEPC MC+ AI  ARIR ++YGA++PK G +++          +H  
Sbjct: 75  HSWRLEDCDLYVTLEPCMMCSGAIVNARIRNVFYGATDPKAGTVDSLYHLLGDDRLNHQA 134

Query: 127 EIYPGISEQRSRQIIQDFFK 146
            +  G+  ++  Q+++DFF+
Sbjct: 135 YVTAGVLGEQCSQMLKDFFR 154


>gi|150024385|ref|YP_001295211.1| cytosine/adenosine deaminase [Flavobacterium psychrophilum
           JIP02/86]
 gi|149770926|emb|CAL42391.1| Probable cytosine/adenosine deaminase [Flavobacterium psychrophilum
           JIP02/86]
          Length = 146

 Score =  112 bits (280), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 59/143 (41%), Positives = 87/143 (60%), Gaps = 6/143 (4%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  AL+EA  A  + EIPVGA+ V+NN+II+++ N    L DVTAHAE+ AI      L
Sbjct: 10  FMRKALQEAYVAFDKEEIPVGAIVVINNRIIAKSHNLTELLNDVTAHAEMQAITASANFL 69

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
             + L    LYVTLEPC MCA A+  ++I ++ +GAS+P+ G  + GTQ       H   
Sbjct: 70  GGKYLTNCILYVTLEPCQMCAGALYWSQISKIVFGASDPQRGFTKMGTQL------HPKT 123

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
            +  GI E    +++++FF+++R
Sbjct: 124 IVVNGILESECGELMKEFFRKKR 146


>gi|239825602|ref|YP_002948226.1| CMP/dCMP deaminase zinc-binding [Geobacillus sp. WCH70]
 gi|239805895|gb|ACS22960.1| CMP/dCMP deaminase zinc-binding [Geobacillus sp. WCH70]
          Length = 160

 Score =  112 bits (280), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 60/149 (40%), Positives = 83/149 (55%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M     +M  A+EEA+ A    E+P+GA+ V +  II+RA N     +   AHAEILAI 
Sbjct: 1   MVNDEYYMRLAIEEAKKAEQIGEVPIGAIIVQDGHIIARAHNLRETEQRAIAHAEILAID 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
             C+ +    L +  LYVTLEPC MCA AI LARI+R+ +GAS+PKGG            
Sbjct: 61  KACKEVGSWRLEDATLYVTLEPCAMCAGAIVLARIKRVVFGASDPKGGCAGTLMNLLQEG 120

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  E+  GI  +   Q++  FF++ R
Sbjct: 121 RFNHQAEVTSGILGEECGQMLSSFFRKLR 149


>gi|116491396|ref|YP_810940.1| tRNA-adenosine deaminase [Oenococcus oeni PSU-1]
 gi|116092121|gb|ABJ57275.1| tRNA-adenosine deaminase [Oenococcus oeni PSU-1]
          Length = 156

 Score =  112 bits (280), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 57/143 (39%), Positives = 85/143 (59%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  AL++AQ A    E+P+GAV V +N++I+   NR  +    TAHAE L I      L
Sbjct: 11  FMQLALKQAQTAFDEGEVPIGAVLVKDNQVIAADHNRKEQSGIATAHAEKLVIEGANCSL 70

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  L+VT+EPC MC  AI  +RI RL+YGA++PK GG+ +       +  +H  
Sbjct: 71  GDWRLNDCSLFVTIEPCVMCCGAIIQSRIPRLFYGAADPKFGGVSSLYHLLEDSRSNHFV 130

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+YP +  ++S  ++QDFF++ R
Sbjct: 131 EVYPDVLAKQSANLMQDFFRKLR 153


>gi|297543592|ref|YP_003675894.1| CMP/dCMP deaminase zinc-binding protein [Thermoanaerobacter
           mathranii subsp. mathranii str. A3]
 gi|296841367|gb|ADH59883.1| CMP/dCMP deaminase zinc-binding protein [Thermoanaerobacter
           mathranii subsp. mathranii str. A3]
          Length = 148

 Score =  112 bits (280), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 58/145 (40%), Positives = 79/145 (54%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           N FM  A+ EA  +    E+PVGAV V +++II R  N+     D TAHAEI+AI+  C+
Sbjct: 3   NKFMKAAILEANKSYQLREVPVGAVIVKDDQIIGRGFNQKEATNDATAHAEIMAIKEACK 62

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
            L    L +  +YVTLEPC MCA AI  ARI+R+Y G  + K G                
Sbjct: 63  TLGSWRLDDCSMYVTLEPCPMCAGAILEARIKRVYIGTESDKSGAAGTVINLLNNPDLGS 122

Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149
             E+Y GI E   + ++++FFK  R
Sbjct: 123 KTEVYFGIMEDECKMLLENFFKTLR 147


>gi|116874087|ref|YP_850868.1| cytidine/deoxycytidylate deaminase zinc-binding domain-containing
           protein [Listeria welshimeri serovar 6b str. SLCC5334]
 gi|116742965|emb|CAK22089.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein
           [Listeria welshimeri serovar 6b str. SLCC5334]
          Length = 156

 Score =  112 bits (280), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 58/143 (40%), Positives = 85/143 (59%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  AL EA+ A    E+P+GAV VL+ +II RA N     ++   HAE+LAI+  C+  
Sbjct: 6   FMQQALAEAEKAQEIGEVPIGAVVVLDGEIIGRAHNLRETSQNAVTHAELLAIQDACKHQ 65

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
           +   L   +LYVTLEPC MC+ AI L+RI ++YYGA +PK G   +          +H+ 
Sbjct: 66  NSWRLSGAELYVTLEPCPMCSGAILLSRIEKVYYGAKDPKAGTAGSLMNLLQDNRFNHTC 125

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+  G+ E  S ++++ FF+E R
Sbjct: 126 EVEAGLMEVESSEMLKKFFQELR 148


>gi|56697818|ref|YP_168189.1| cytidine and deoxycytidylate deaminase family protein [Ruegeria
           pomeroyi DSS-3]
 gi|56679555|gb|AAV96221.1| cytidine and deoxycytidylate deaminase family protein [Ruegeria
           pomeroyi DSS-3]
          Length = 159

 Score =  112 bits (280), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 72/143 (50%), Positives = 99/143 (69%), Gaps = 1/143 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  AL EA+ A  R E+PVGAV V  + ++++ AGNR RE  D TAHAEI+A+R  C   
Sbjct: 7   MDQALAEARAAGARGEVPVGAVIVAPDGRVVAAAGNRTRETCDPTAHAEIVALRAACAAA 66

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
             E L   DLYVTLEPC MCAAA++ ARIRR+YYGA++PK GG+ +G + ++    HH+P
Sbjct: 67  GSERLVGHDLYVTLEPCAMCAAALAAARIRRVYYGAADPKSGGVAHGARVFSHPQAHHAP 126

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+Y GI  + + ++++ FF ERR
Sbjct: 127 EVYDGIGGEAAAELLRGFFAERR 149


>gi|227513704|ref|ZP_03943753.1| possible guanine deaminase [Lactobacillus buchneri ATCC 11577]
 gi|227522506|ref|ZP_03952555.1| possible guanine deaminase [Lactobacillus hilgardii ATCC 8290]
 gi|227083023|gb|EEI18335.1| possible guanine deaminase [Lactobacillus buchneri ATCC 11577]
 gi|227090328|gb|EEI25640.1| possible guanine deaminase [Lactobacillus hilgardii ATCC 8290]
          Length = 157

 Score =  112 bits (279), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 58/143 (40%), Positives = 83/143 (58%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
           K   FM  AL EAQ A L  E+P+GAV   + +II R  N    L D  AHAEI+AI   
Sbjct: 5   KDERFMKMALIEAQKAYLIGEVPIGAVITQDGQIIGRGHNLREHLNDGVAHAEIMAIEEA 64

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
           CR L    L + +LYVT+EPC MC+ AI  +RI R+ +GA + K G + +  +    +  
Sbjct: 65  CRYLRSWRLVDCELYVTIEPCLMCSGAIVNSRIDRVVFGARDKKAGAVRSLYRVLEDSRL 124

Query: 123 HHSPEIYPGISEQRSRQIIQDFF 145
           +H+ E++ G+ +    +II+DFF
Sbjct: 125 NHNVEVFEGVLQPACSKIIKDFF 147


>gi|227356250|ref|ZP_03840639.1| tRNA-specific adenosine deaminase [Proteus mirabilis ATCC 29906]
 gi|227163714|gb|EEI48630.1| tRNA-specific adenosine deaminase [Proteus mirabilis ATCC 29906]
          Length = 176

 Score =  112 bits (279), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 60/143 (41%), Positives = 83/143 (58%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  A+E+A  A    EIPVGAV V +NKII++  N +    D TAHAEI+A+R G + L
Sbjct: 10  WMHKAIEQAHKAQQLGEIPVGAVLVADNKIIAKGWNHSIIDNDPTAHAEIMALRKGGKHL 69

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  LY+TLEPC MCA AI  +R++R+ YGAS+ K G   +          +H  
Sbjct: 70  QNYRLLDATLYITLEPCVMCAGAIVHSRVKRVVYGASDLKTGAAGSFIDILQHPGMNHKV 129

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           EI  G+  +   Q++  FFK RR
Sbjct: 130 EITSGVLGEECAQLLSQFFKMRR 152


>gi|86132518|ref|ZP_01051112.1| cytidine/deoxycytidylate deaminase family protein [Dokdonia
           donghaensis MED134]
 gi|85817079|gb|EAQ38263.1| cytidine/deoxycytidylate deaminase family protein [Dokdonia
           donghaensis MED134]
          Length = 149

 Score =  112 bits (279), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 63/143 (44%), Positives = 85/143 (59%), Gaps = 6/143 (4%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  AL+EAQ A  + EIPVGAV V++N II+RA N    L DVTAHAE+ AI      +
Sbjct: 10  FMKKALQEAQAAFDQGEIPVGAVVVIDNMIIARAHNLTERLTDVTAHAEMQAITSASNYI 69

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
             + L +  LYVTLEPC MCA A+  ++I R+ YGAS+ + G  + GT      T H   
Sbjct: 70  GGKYLQQCTLYVTLEPCQMCAGALYWSQIGRIVYGASDERRGYEKMGT------TLHPKT 123

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           ++  GI      QI++ FF ++R
Sbjct: 124 KVERGILAHECEQIMKRFFIDKR 146


>gi|332666401|ref|YP_004449189.1| CMP/dCMP deaminase zinc-binding protein [Haliscomenobacter
           hydrossis DSM 1100]
 gi|332335215|gb|AEE52316.1| CMP/dCMP deaminase zinc-binding protein [Haliscomenobacter
           hydrossis DSM 1100]
          Length = 148

 Score =  112 bits (279), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 62/143 (43%), Positives = 84/143 (58%), Gaps = 5/143 (3%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  AL+EAQ A    EIPVGAV    N+II+R  N   +L DVTAHAEIL+I      L
Sbjct: 10  FMQEALKEAQLAFEEGEIPVGAVIACENRIIARGHNTTEKLLDVTAHAEILSITAASNYL 69

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
           + + LP+  LYVTLEPC MCA AI  A++ RL YGA + K G +  G +       H   
Sbjct: 70  NSKYLPDCTLYVTLEPCNMCAGAIFWAQMGRLVYGAGDEKRGFMRIGKELL-----HPKT 124

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
            +  G+  +   Q++++FF++ R
Sbjct: 125 TLEYGVLHEECSQLLKEFFQKIR 147


>gi|126652937|ref|ZP_01725079.1| probable cytidine/deoxycytidylate deaminase family protein
           [Bacillus sp. B14905]
 gi|126590267|gb|EAZ84389.1| probable cytidine/deoxycytidylate deaminase family protein
           [Bacillus sp. B14905]
          Length = 170

 Score =  112 bits (279), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 58/144 (40%), Positives = 86/144 (59%)

Query: 6   VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           +FM  ALEEA+ AA+  E+P+GAV V + +II+RA N     ++ T HAE++ I+  C+ 
Sbjct: 9   LFMKQALEEAKKAAILGEVPIGAVLVYDGEIIARAHNLRETTQNATTHAELMVIQEACQK 68

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           +    L +  LYVTLEPC MCA AI  +R+ R+ YGA + K G +++  +    A  +H 
Sbjct: 69  IGSWRLEKTTLYVTLEPCPMCAGAILQSRVPRVVYGARDMKAGCVDSLYRLLNDARFNHE 128

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
            E+  GI      QI+ DFF+  R
Sbjct: 129 CEVSEGILAAECGQILTDFFRALR 152


>gi|325288211|ref|YP_004264392.1| tRNA-adenosine deaminase [Syntrophobotulus glycolicus DSM 8271]
 gi|324963612|gb|ADY54391.1| tRNA-adenosine deaminase [Syntrophobotulus glycolicus DSM 8271]
          Length = 148

 Score =  112 bits (279), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 58/143 (40%), Positives = 85/143 (59%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  AL++A+ A  ++E+P+GAV V N +I++ A N     +D TAHAE+LAI+   + L
Sbjct: 6   WMRLALKQAETALEKDEVPIGAVIVKNGEILALAHNEKETNQDPTAHAEMLAIKRAAQKL 65

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L    LYVTLEPC MCA AI  +RI  L YGA + KGG + +          +H  
Sbjct: 66  GAWRLSGATLYVTLEPCPMCAGAIIQSRIETLVYGADDSKGGAVGSVLNVLQHQLWNHKV 125

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           EI  GI E+ S ++++ FF+ +R
Sbjct: 126 EIITGILEEESARLLKGFFRSKR 148


>gi|307267454|ref|ZP_07548942.1| CMP/dCMP deaminase zinc-binding [Thermoanaerobacter wiegelii
           Rt8.B1]
 gi|306917535|gb|EFN47821.1| CMP/dCMP deaminase zinc-binding [Thermoanaerobacter wiegelii
           Rt8.B1]
          Length = 148

 Score =  112 bits (279), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 57/145 (39%), Positives = 82/145 (56%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           N FM  A+ EA+ +    E+PVGAV V + +II +  N+     D TAHAEILAI+  C+
Sbjct: 3   NRFMEAAILEAKKSYQLGEVPVGAVIVKDGQIIGKGFNQKESSNDATAHAEILAIKEACK 62

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
            L    L +  +YVTLEPC MCA AI  +RI+R+Y GA + + G           +    
Sbjct: 63  TLGSWRLDDCSMYVTLEPCPMCAGAILESRIKRVYIGAESERTGAAGTVVDILNNSYLGS 122

Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149
             E+Y GI E+  + +++DFF+  R
Sbjct: 123 KTEVYFGIMEEECKTLLKDFFENLR 147


>gi|295402713|ref|ZP_06812655.1| CMP/dCMP deaminase zinc-binding [Geobacillus thermoglucosidasius
           C56-YS93]
 gi|312109168|ref|YP_003987484.1| CMP/dCMP deaminase zinc-binding protein [Geobacillus sp. Y4.1MC1]
 gi|294975244|gb|EFG50880.1| CMP/dCMP deaminase zinc-binding [Geobacillus thermoglucosidasius
           C56-YS93]
 gi|311214269|gb|ADP72873.1| CMP/dCMP deaminase zinc-binding protein [Geobacillus sp. Y4.1MC1]
          Length = 161

 Score =  112 bits (279), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 57/143 (39%), Positives = 82/143 (57%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  A+EEA+ A    E+P+GA+ V    +I+RA N     +   AHAEILAI   C+  
Sbjct: 7   YMRLAIEEAKQAEQIGEVPIGAIIVQGGNVIARAHNLRETAQRAIAHAEILAIDEACKKA 66

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  LYVTLEPC MCA AI LARI+R+ +GAS+PKGG              +H  
Sbjct: 67  GSWRLEDATLYVTLEPCAMCAGAIVLARIKRVVFGASDPKGGCAGTLMNLLQEGRFNHQA 126

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+  G+ ++   Q++ +FF++ R
Sbjct: 127 EVIGGVLQEECGQMLSNFFRKLR 149


>gi|325856324|ref|ZP_08172040.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Prevotella denticola CRIS 18C-A]
 gi|325483508|gb|EGC86480.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Prevotella denticola CRIS 18C-A]
          Length = 144

 Score =  112 bits (279), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 62/149 (41%), Positives = 83/149 (55%), Gaps = 5/149 (3%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           MKK   +M  AL+EA  A    EIPVGAV V  ++II+RA N    L DVTAHAE+ AI 
Sbjct: 1   MKKDLYYMQRALDEAGAAYREGEIPVGAVVVCRDRIIARAHNLTETLNDVTAHAEMQAIT 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
           M    L  + L +  LYVT+EPC MCA AI  A+ RR+ YG  + K      G   Y   
Sbjct: 61  MAAGELGGKYLQDCTLYVTVEPCVMCAGAIGWAQFRRIVYGCPDEK-----RGYHLYAPK 115

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             H   ++  G+  +  + +++ FF+ERR
Sbjct: 116 ALHPRADVTYGVMGEECKALMRRFFQERR 144


>gi|169825638|ref|YP_001695796.1| hypothetical protein Bsph_0024 [Lysinibacillus sphaericus C3-41]
 gi|168990126|gb|ACA37666.1| Hypothetical yaaJ protein [Lysinibacillus sphaericus C3-41]
          Length = 170

 Score =  112 bits (279), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 58/144 (40%), Positives = 86/144 (59%)

Query: 6   VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           +FM  ALEEA+ AA+  E+P+GAV V + +II+RA N     ++ T HAE++ I+  C+ 
Sbjct: 9   LFMKQALEEAKKAAILGEVPIGAVLVYDGEIIARAHNLRETTQNATTHAELMVIQEACQK 68

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           +    L +  LYVTLEPC MCA AI  +R+ R+ YGA + K G +++  +    A  +H 
Sbjct: 69  IGSWRLEKTTLYVTLEPCPMCAGAILQSRVPRVVYGARDIKAGCVDSLYRILNDARFNHE 128

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
            E+  GI      QI+ DFF+  R
Sbjct: 129 CEVSEGILADECGQILTDFFRALR 152


>gi|218780678|ref|YP_002431996.1| CMP/dCMP deaminase zinc-binding [Desulfatibacillum alkenivorans
           AK-01]
 gi|218762062|gb|ACL04528.1| CMP/dCMP deaminase zinc-binding [Desulfatibacillum alkenivorans
           AK-01]
          Length = 156

 Score =  112 bits (279), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 60/150 (40%), Positives = 89/150 (59%), Gaps = 1/150 (0%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAI 59
           M+K + +M  AL+EA+ A   +E+PVGAV VL +  +I +A NR   L D  AHAEILA+
Sbjct: 1   MEKHSKYMQMALDEAKTAWDEDEVPVGAVLVLPDQDLIIKAHNRTIGLNDAAAHAEILAL 60

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
           R   R++    L    LY T+EPC MC  A+  AR+ ++ +GA + K G   +   F + 
Sbjct: 61  REAGRVIGNYRLLNSVLYCTVEPCIMCMGAVIHARVSKVVFGAPDLKWGACGSLYDFASD 120

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
              +H PEI  G+ E+  R I+Q+FF+ +R
Sbjct: 121 PGLNHHPEIVSGVCEEACRTIMQEFFRLKR 150


>gi|332879982|ref|ZP_08447666.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Capnocytophaga sp. oral taxon 329 str. F0087]
 gi|332681978|gb|EGJ54891.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Capnocytophaga sp. oral taxon 329 str. F0087]
          Length = 145

 Score =  111 bits (278), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 58/149 (38%), Positives = 86/149 (57%), Gaps = 6/149 (4%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M +   FM  ALEEA+ A   +EIPVGA+  ++N+II+RA N    L DVTAHAE+ AI 
Sbjct: 1   MTEDEYFMQKALEEAEVAFEEDEIPVGAIITIDNRIIARAHNMTERLNDVTAHAEMQAIT 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
           M    L  + L +  +Y+TLEPC MCA A+  +++ RL Y A++   G    G       
Sbjct: 61  MAANYLGGKYLKDCTMYLTLEPCAMCAGALYWSQLSRLVYAAADTHRGYTVMG------G 114

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
           T H   EI  G+    + ++++ FF+++R
Sbjct: 115 TLHPKTEITTGVLAAPATELLKQFFQQKR 143


>gi|32477503|ref|NP_870497.1| cytosine deaminase [Rhodopirellula baltica SH 1]
 gi|32448057|emb|CAD77574.1| cytosine deaminase [Rhodopirellula baltica SH 1]
 gi|327542170|gb|EGF28663.1| CMP/dCMP deaminase zinc-binding protein [Rhodopirellula baltica
           WH47]
          Length = 159

 Score =  111 bits (278), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 57/143 (39%), Positives = 86/143 (60%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  A+E AQ+AAL +E+PVGA+ V +   I+ A N+   L D TAHAE++AI      +
Sbjct: 12  WMQRAIEMAQSAALEDEVPVGAIIVRSGTAIAAAANQREALHDPTAHAEMIAITQAAASI 71

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  LYVTLEPC MCA AI  AR+ R+ +GAS+PK G + +  +  T +  +H  
Sbjct: 72  ENWRLEQTTLYVTLEPCLMCAGAILQARVPRVVFGASDPKAGAVTSLYEVLTDSRLNHRC 131

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           EI  G+  ++   ++ +FF  +R
Sbjct: 132 EITHGVMAEQCGHLLTEFFSAKR 154


>gi|95928326|ref|ZP_01311074.1| CMP/dCMP deaminase, zinc-binding [Desulfuromonas acetoxidans DSM
           684]
 gi|95135597|gb|EAT17248.1| CMP/dCMP deaminase, zinc-binding [Desulfuromonas acetoxidans DSM
           684]
          Length = 165

 Score =  111 bits (278), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 57/143 (39%), Positives = 84/143 (58%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  AL+ A+ A    E+PVGAV VLN K+I+ AGNR    +D TAHAE++A+R   + +
Sbjct: 9   YMRRALDLARQAEQLGEVPVGAVVVLNGKVIAAAGNRRETWQDPTAHAELIALREAAKRI 68

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L E  LYVTLEPC MC   I L+RI RL +GA +P+ G + +          +H  
Sbjct: 69  DSWRLEEATLYVTLEPCIMCMGGIILSRIPRLVFGARDPRVGAVGSVFDLADDERFNHRV 128

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+  G+  +   +I+ +FF++ R
Sbjct: 129 EVSEGVLAEECSEILSNFFRQLR 151


>gi|302872965|ref|YP_003841598.1| CMP/dCMP deaminase zinc-binding [Clostridium cellulovorans 743B]
 gi|307686520|ref|ZP_07628966.1| CMP/dCMP deaminase zinc-binding protein [Clostridium cellulovorans
           743B]
 gi|302575822|gb|ADL49834.1| CMP/dCMP deaminase zinc-binding [Clostridium cellulovorans 743B]
          Length = 147

 Score =  111 bits (278), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 62/149 (41%), Positives = 86/149 (57%), Gaps = 7/149 (4%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
            N F+  A+EEA+ A    E+PVGAV + ++K+I+ A N     K+VTAHAE+LAI+M  
Sbjct: 2   NNNFLKIAIEEAKKARELGEVPVGAVIIKDDKVIAAAHNLKETKKEVTAHAELLAIKMAS 61

Query: 64  RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG---IENGTQFYTLA 120
            IL    L + ++YVTLEPC MCA+AI  +RI+++Y G   P  G    + N  Q   L 
Sbjct: 62  EILDNWRLNDCEIYVTLEPCAMCASAIVQSRIKKIYIGTFEPTTGACGSVINLVQNEALN 121

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
           +  H   +Y          II +FFKERR
Sbjct: 122 SFVHVEWLYS----DECSDIITEFFKERR 146


>gi|223043054|ref|ZP_03613102.1| tRNA-specific adenosine deaminase [Staphylococcus capitis SK14]
 gi|222443908|gb|EEE50005.1| tRNA-specific adenosine deaminase [Staphylococcus capitis SK14]
          Length = 168

 Score =  111 bits (278), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 60/149 (40%), Positives = 84/149 (56%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M+    +M  A++EAQ A    E+P+GAV V NN++I+ A N    L+  TAHAE +AI 
Sbjct: 1   MRTDKDYMRLAIKEAQKAQALGEVPIGAVIVKNNQVIAHAHNLRESLQLPTAHAEHIAIE 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              +++    L E  LYVTLEPC MCA AI ++RI R+ YGA +PKGG   +        
Sbjct: 61  RASKVVGSWRLEECTLYVTLEPCVMCAGAIVMSRIPRVVYGAVDPKGGCTGSLMNLLEQP 120

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H   +  GI E     +++DFFK  R
Sbjct: 121 QFNHRAIVESGILENECSTLLRDFFKNIR 149


>gi|34540529|ref|NP_905008.1| cytidine/deoxycytidylate deaminase family protein [Porphyromonas
           gingivalis W83]
 gi|188994633|ref|YP_001928885.1| putative cytosine/adenosine deaminase [Porphyromonas gingivalis
           ATCC 33277]
 gi|34396842|gb|AAQ65907.1| cytidine/deoxycytidylate deaminase family protein [Porphyromonas
           gingivalis W83]
 gi|188594313|dbj|BAG33288.1| putative cytosine/adenosine deaminase [Porphyromonas gingivalis
           ATCC 33277]
          Length = 150

 Score =  111 bits (278), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 62/143 (43%), Positives = 82/143 (57%), Gaps = 5/143 (3%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  ALEEA+ AA   EIP+GAV V   +I++RA NR   L D TAHAE+LAI M    +
Sbjct: 13  YMRIALEEARAAADEGEIPIGAVIVCKGQIVARAHNRVERLNDPTAHAEMLAITMAVDAI 72

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
             + L +  LYVT+EPC MCA A+   +I R+ YGAS PK      G + +T    H   
Sbjct: 73  GGKYLRDCTLYVTVEPCLMCAGALRWTQIPRVVYGASEPK-----VGYRLFTDHALHPKC 127

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
            +  GI    S  +++ FF ERR
Sbjct: 128 HVEGGILADESENLMRSFFAERR 150


>gi|331270688|ref|YP_004397180.1| CMP/dCMP deaminase, zinc-binding protein [Clostridium botulinum
           BKT015925]
 gi|329127238|gb|AEB77183.1| CMP/dCMP deaminase, zinc-binding protein [Clostridium botulinum
           BKT015925]
          Length = 147

 Score =  111 bits (278), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 64/146 (43%), Positives = 85/146 (58%), Gaps = 7/146 (4%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  AL+EA+ A  + E+PVGAV V N K+I+ A N    LKD TAHAEILAI+  C IL
Sbjct: 5   FMKLALKEAEIAKNKEEVPVGAVIVKNGKVIASAHNLRETLKDPTAHAEILAIKKACGIL 64

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKG---GGIENGTQFYTLATCH 123
               L E ++YVTLEPC MC  AI  +RI+++Y G  +P     G + +  Q   L T  
Sbjct: 65  GNWRLSECEMYVTLEPCPMCTGAIIQSRIKKIYIGTFDPVAGCCGSVVDLAQNRYLNTMV 124

Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149
               IY    ++   +I+ +FFK RR
Sbjct: 125 DVTWIY----DKECSEILTNFFKNRR 146


>gi|313204491|ref|YP_004043148.1| cmp/dcmp deaminase zinc-binding protein [Paludibacter
           propionicigenes WB4]
 gi|312443807|gb|ADQ80163.1| CMP/dCMP deaminase zinc-binding protein [Paludibacter
           propionicigenes WB4]
          Length = 158

 Score =  111 bits (278), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 60/143 (41%), Positives = 82/143 (57%), Gaps = 5/143 (3%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  AL EAQ A  R+E+P+GAV V   +II+R  N    L DVTAHAE+ AI    + L
Sbjct: 20  FMRQALMEAQRAGERDEVPIGAVIVCQGRIIARGHNLTETLTDVTAHAEMQAITAAAQFL 79

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
             + L +  LYVT+EPC MCA A+  ++I R+ YGAS+ K G +      +     H   
Sbjct: 80  GGKYLIDCSLYVTVEPCVMCAGALGWSQISRVVYGASDEKRGFVR-----FAPNALHPKT 134

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           EI  GI E    ++++ FFK +R
Sbjct: 135 EIVSGILEADCSKLVKKFFKRKR 157


>gi|298571687|gb|ADI87839.1| hypothetical protein AKSOIL_0331 [uncultured bacterium Ak20-3]
          Length = 156

 Score =  111 bits (278), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 60/148 (40%), Positives = 81/148 (54%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           K    FM   LE A  A    E+P+GAV V + KIIS + N+  +  D T HAEILAI  
Sbjct: 6   KNHEYFMKRCLELAHEAEKNLEVPIGAVIVHDGKIISESSNKREKNHDATGHAEILAIHD 65

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
            C+ L    L   DLYVTLEPC MCA A+  ARIR +Y+GA +PKGG + +  + +    
Sbjct: 66  ACQKLQSWRLSACDLYVTLEPCLMCAGALVQARIRNVYFGAYDPKGGALGSLYKIHEDTR 125

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H      G+       ++  FFK++R
Sbjct: 126 LNHRFPAVGGVLGDECGSLLSTFFKKKR 153


>gi|229083334|ref|ZP_04215694.1| hypothetical protein bcere0022_180 [Bacillus cereus Rock3-44]
 gi|228699981|gb|EEL52606.1| hypothetical protein bcere0022_180 [Bacillus cereus Rock3-44]
          Length = 165

 Score =  111 bits (277), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 58/145 (40%), Positives = 83/145 (57%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M++   FM  A+EEA+ A    E+P+GAV VL+ +++S A N     +   AHAE+LAI 
Sbjct: 1   MEQDIYFMQLAIEEAKKAEEIQEVPIGAVIVLDGEVVSVAHNLRETEQRSIAHAELLAID 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
             C+ L    L    LYVTLEPC MCA  I L+R++R+ YGAS+PKGG         T  
Sbjct: 61  EACKKLGTWRLENATLYVTLEPCPMCAGGIVLSRVKRVVYGASDPKGGCAGTLMNLLTDE 120

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFF 145
             +H  E+  G+ E+    ++ +FF
Sbjct: 121 RFNHQCEVVSGVMEEECGTLLTNFF 145


>gi|194289718|ref|YP_002005625.1| tRNA-specific adenosine deaminase [Cupriavidus taiwanensis LMG
           19424]
 gi|193223553|emb|CAQ69558.1| tRNA-specific adenosine deaminase [Cupriavidus taiwanensis LMG
           19424]
          Length = 194

 Score =  111 bits (277), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 57/139 (41%), Positives = 82/139 (58%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  ALEEA+ A    E+PVGAV V N+ II+R  N      D +AHAE+ A+R   +++
Sbjct: 29  YMRAALEEARLAEAAGEVPVGAVVVWNDTIIARGHNLPIRSVDPSAHAEMQALRAAAQVI 88

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               +PE +LYVTLEPC MC+ AI  AR+R + +GAS+PK G   +    +  A  +H  
Sbjct: 89  GNYRMPECELYVTLEPCAMCSGAILHARLRHVVFGASDPKTGAAGSVVNLFEQAQLNHQT 148

Query: 127 EIYPGISEQRSRQIIQDFF 145
            I  G+      Q+++DFF
Sbjct: 149 TIAGGVLADPCGQMLKDFF 167


>gi|282880121|ref|ZP_06288841.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Prevotella timonensis CRIS 5C-B1]
 gi|281305994|gb|EFA98034.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Prevotella timonensis CRIS 5C-B1]
          Length = 151

 Score =  111 bits (277), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 64/149 (42%), Positives = 84/149 (56%), Gaps = 5/149 (3%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +K+   FM  AL EAQ A    EIP+GAV V   +IISRA N    L DVTAHAE+LAI 
Sbjct: 7   LKRDEYFMRKALIEAQAAFDEGEIPIGAVVVCKGQIISRAHNLTERLHDVTAHAEMLAIT 66

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
                L  + L +  LYVT+EPC MCA+A   A++ R+ +GAS+ K      G + Y   
Sbjct: 67  AATNQLGGKYLTDCTLYVTIEPCPMCASACGWAQLSRVVFGASDDK-----RGFKRYAPK 121

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             H   EI  G+  +    ++Q FFK+RR
Sbjct: 122 VLHPKAEITNGVLREDCMALMQLFFKKRR 150


>gi|311745177|ref|ZP_07718962.1| cytidine/deoxycytidylate deaminase family protein [Algoriphagus sp.
           PR1]
 gi|311302345|gb|EAZ81919.2| cytidine/deoxycytidylate deaminase family protein [Algoriphagus sp.
           PR1]
          Length = 147

 Score =  111 bits (277), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 60/143 (41%), Positives = 88/143 (61%), Gaps = 5/143 (3%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M+ AL++A+ A    EIPVGAV VL N+II+RA N+  +L DVTAHAE+LAI      +
Sbjct: 9   YMNEALKQAKIAFEEGEIPVGAVIVLKNRIIARAYNQTEKLNDVTAHAEMLAITSAANYM 68

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
             + L +  LYVTLEPCTMCA A+  ++I  ++Y A + K G  ++  +       H   
Sbjct: 69  GAKYLNDCKLYVTLEPCTMCAGALFWSQIGEVHYAAQDEKRGYRKSNPEI-----LHPKT 123

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           +++ G   + S Q+I DFFK+ R
Sbjct: 124 KVFQGPFREESEQLILDFFKKLR 146


>gi|228989231|ref|ZP_04149225.1| hypothetical protein bpmyx0001_110 [Bacillus pseudomycoides DSM
           12442]
 gi|228995414|ref|ZP_04155085.1| hypothetical protein bmyco0003_200 [Bacillus mycoides Rock3-17]
 gi|229003028|ref|ZP_04160886.1| hypothetical protein bmyco0002_210 [Bacillus mycoides Rock1-4]
 gi|228758228|gb|EEM07415.1| hypothetical protein bmyco0002_210 [Bacillus mycoides Rock1-4]
 gi|228764340|gb|EEM13216.1| hypothetical protein bmyco0003_200 [Bacillus mycoides Rock3-17]
 gi|228770506|gb|EEM19076.1| hypothetical protein bpmyx0001_110 [Bacillus pseudomycoides DSM
           12442]
          Length = 165

 Score =  111 bits (277), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 59/145 (40%), Positives = 82/145 (56%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M++   FM  A+EEA+ A    E+P+GAV VL  ++IS A N     +   AHAE+LAI 
Sbjct: 1   MEQDIYFMQLAIEEAKKAEEIQEVPIGAVIVLGGEVISVAHNLRETEQRSIAHAELLAID 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
             C+ L    L    LYVTLEPC MCA  I L+R++R+ YGAS+PKGG         T  
Sbjct: 61  EACKKLGTWRLENATLYVTLEPCPMCAGGIVLSRVKRVVYGASDPKGGCAGTLMNLLTDE 120

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFF 145
             +H  E+  G+ E+    ++ +FF
Sbjct: 121 RFNHQCEVVSGVMEEECGMLLTNFF 145


>gi|197285737|ref|YP_002151609.1| tRNA-specific adenosine deaminase [Proteus mirabilis HI4320]
 gi|194683224|emb|CAR43904.1| tRNA-specific adenosine deaminase [Proteus mirabilis HI4320]
          Length = 176

 Score =  111 bits (277), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 60/143 (41%), Positives = 82/143 (57%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  A+E+A  A    EIPVGAV V  NKII++  N +    D TAHAEI+A+R G + L
Sbjct: 10  WMHKAIEQAHKAQQLGEIPVGAVLVAENKIIAKGWNHSIIDNDPTAHAEIMALRKGGKHL 69

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  LY+TLEPC MCA AI  +R++R+ YGAS+ K G   +          +H  
Sbjct: 70  QNYRLLDATLYITLEPCVMCAGAIVHSRVKRVVYGASDLKTGAAGSFIDILQHPGMNHKV 129

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           EI  G+  +   Q++  FFK RR
Sbjct: 130 EITSGVLGEECAQLLSQFFKMRR 152


>gi|89898061|ref|YP_515171.1| cytosine/adenosine deaminases [Chlamydophila felis Fe/C-56]
 gi|89331433|dbj|BAE81026.1| cytosine/adenosine deaminases [Chlamydophila felis Fe/C-56]
          Length = 157

 Score =  111 bits (277), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 61/149 (40%), Positives = 85/149 (57%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           ++K   FM  AL EA+ A   +E+PVG V V +NKII+R  N   +L+D TAHAEIL I 
Sbjct: 3   IEKDIFFMKQALREARQAYDEDEVPVGCVIVKDNKIIARGHNTIEKLQDPTAHAEILCIG 62

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              + L    L +  LY TLEPC MCA AI  AR+RR+ + A + + G   +    +T  
Sbjct: 63  AAAQYLENWRLVDTVLYCTLEPCLMCAGAIQQARVRRIVWAAPDLRLGAGGSWINVFTEK 122

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
              H  E + GI  + S Q+++ FF E+R
Sbjct: 123 HPFHRVECFSGICREESEQLMKQFFIEKR 151


>gi|325286553|ref|YP_004262343.1| CMP/dCMP deaminase zinc-binding protein [Cellulophaga lytica DSM
           7489]
 gi|324322007|gb|ADY29472.1| CMP/dCMP deaminase zinc-binding protein [Cellulophaga lytica DSM
           7489]
          Length = 149

 Score =  111 bits (277), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 60/143 (41%), Positives = 84/143 (58%), Gaps = 6/143 (4%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  ALEEAQ A  + E+PVGAV V+ ++II+RA N   +L DVTAHAE+ AI      L
Sbjct: 10  FMKKALEEAQAAYDKGEVPVGAVIVIKDRIIARAHNLTEQLNDVTAHAEMQAITSAANFL 69

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
             + L    LYVTLEPC MCA A+  ++I ++ Y A + K G     T      T H   
Sbjct: 70  GGKYLENCTLYVTLEPCQMCAGALYWSQISKIVYAAKDVKRGFTAMST------TLHPKT 123

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           +I  G+ E+ + ++++ FF E+R
Sbjct: 124 KISGGLLEKEASELLKRFFIEKR 146


>gi|299141289|ref|ZP_07034426.1| cytidine/deoxycytidylate deaminase family protein [Prevotella oris
           C735]
 gi|298577249|gb|EFI49118.1| cytidine/deoxycytidylate deaminase family protein [Prevotella oris
           C735]
          Length = 148

 Score =  110 bits (276), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 66/147 (44%), Positives = 87/147 (59%), Gaps = 5/147 (3%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
           K   +M  AL EA+ AA   EIP+GAV V  ++IISRA N   +L DVTAHAE+ AI   
Sbjct: 7   KDEQYMRKALYEAERAAEEGEIPIGAVIVCKDRIISRAHNLTEKLHDVTAHAEMQAITSA 66

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
             +L  + L +  LYVT+EPC MCA AI  A+I R+ YGAS+ K      G Q Y     
Sbjct: 67  ADLLGGKYLSDCTLYVTVEPCVMCAGAIGWAQIGRIVYGASDEK-----RGYQLYAPRAF 121

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           H    +  G+ E   RQ++Q+FFK++R
Sbjct: 122 HPKATVTRGVLEAECRQLMQEFFKQKR 148


>gi|313891940|ref|ZP_07825541.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Dialister microaerophilus UPII 345-E]
 gi|313119583|gb|EFR42774.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Dialister microaerophilus UPII 345-E]
          Length = 149

 Score =  110 bits (276), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 55/143 (38%), Positives = 88/143 (61%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M+ A++EA+ A + NE+P+GA+    + II+ + N   + K++  HAEILAI+   ++L
Sbjct: 6   YMTLAIQEAKKAYMNNEMPIGAIITYKDIIIANSYNECEKNKNIFDHAEILAIKKASKLL 65

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
           +   L    LYVT+EPC MCA AI  +RI RL +GA N   GGI +  +    ++ +H+ 
Sbjct: 66  NTSRLTGCTLYVTIEPCPMCAGAIMHSRIDRLVFGAFNNLYGGIISKYKIGKDSSMNHTL 125

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
            +  GI E   +Q++ DFFK +R
Sbjct: 126 SVVSGIEENTCKQLVCDFFKNKR 148


>gi|15672703|ref|NP_266877.1| hypothetical protein L127182 [Lactococcus lactis subsp. lactis
           Il1403]
 gi|281491217|ref|YP_003353197.1| tRNA-specific adenosine deaminase [Lactococcus lactis subsp. lactis
           KF147]
 gi|12723633|gb|AAK04819.1|AE006305_11 conserved hypothetical protein [Lactococcus lactis subsp. lactis
           Il1403]
 gi|281374958|gb|ADA64476.1| tRNA-specific adenosine deaminase [Lactococcus lactis subsp. lactis
           KF147]
 gi|326406265|gb|ADZ63336.1| tRNA-specific adenosine deaminase [Lactococcus lactis subsp. lactis
           CV56]
          Length = 155

 Score =  110 bits (276), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 63/140 (45%), Positives = 85/140 (60%), Gaps = 2/140 (1%)

Query: 11  ALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKD-VTAHAEILAIRMGCRILSQE 69
           AL+EAQ AA   E+P+G V V + +II+R  NR REL    T HAE+ AI    + +   
Sbjct: 15  ALKEAQKAAENEEVPIGVVIVKDGEIIARDFNR-RELDGRATHHAEVCAIEAANQAVGNW 73

Query: 70  ILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIY 129
            L +  L+VT+EPC MCA AI LARI ++Y+GA+NPK GG  +  Q       +H  ++ 
Sbjct: 74  RLLDCALFVTIEPCVMCAGAIGLARIPQVYFGATNPKFGGTVSLYQILEDKRLNHRVQVE 133

Query: 130 PGISEQRSRQIIQDFFKERR 149
            GI E    +I+QDFFK RR
Sbjct: 134 SGILEDECAKIMQDFFKNRR 153


>gi|120437789|ref|YP_863475.1| cytidine/deoxycytidylate deaminase family protein [Gramella
           forsetii KT0803]
 gi|117579939|emb|CAL68408.1| cytidine/deoxycytidylate deaminase family protein [Gramella
           forsetii KT0803]
          Length = 149

 Score =  110 bits (276), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 58/143 (40%), Positives = 83/143 (58%), Gaps = 6/143 (4%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  ALEEA++A  + EIPVG V V+N+KII+R  N    L DVTAHAE+ AI      L
Sbjct: 10  FMKKALEEAESAYEKGEIPVGVVVVINDKIIARGHNLTETLNDVTAHAEMQAITAAANFL 69

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
             + L    +Y+TLEPC MCA A+  ++I ++ +GA + + G  + G Q       H   
Sbjct: 70  GGKYLQNCTMYITLEPCQMCAGALYWSQISKIVFGAEDSQRGYRKFGVQL------HPKT 123

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+  GI  + +  I++ FF E+R
Sbjct: 124 EVKSGIMAEEASSILKRFFIEKR 146


>gi|52783876|ref|YP_089705.1| YaaJ [Bacillus licheniformis ATCC 14580]
 gi|52346378|gb|AAU39012.1| YaaJ [Bacillus licheniformis ATCC 14580]
          Length = 162

 Score =  110 bits (276), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 58/149 (38%), Positives = 84/149 (56%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M +   +M  A+ EA+ A  + E+P+GAV VL+ +II+RA N     +   AHAE+L I 
Sbjct: 3   MTQDEFYMKEAVNEARKAEEKGEVPIGAVLVLDGEIIARAHNLRETEQRSVAHAEMLVIE 62

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
             CR L    L    LYVTLEPC MCA A  L+RI ++ +GAS+PKGG            
Sbjct: 63  EACRKLGTWRLERAVLYVTLEPCPMCAGAAVLSRIDKVVFGASDPKGGCAGTLMNLLQEE 122

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  E+  G+ E+   +++ DFF++ R
Sbjct: 123 RFNHQAEVVSGVMEEECGRMLSDFFRKLR 151


>gi|152981408|ref|YP_001353698.1| hypothetical protein mma_2008 [Janthinobacterium sp. Marseille]
 gi|151281485|gb|ABR89895.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille]
          Length = 159

 Score =  110 bits (276), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 55/144 (38%), Positives = 83/144 (57%)

Query: 6   VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           +FM  AL++A+NA    E+PVGAV V + ++I+   N+     D TAHAEI+A+R    I
Sbjct: 5   IFMRQALDQARNAWTLGEVPVGAVVVKDGEVIATGFNQPIGTHDPTAHAEIMALRAAASI 64

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           L    LP  +L+VTLEPC MC+ A+  AR+ R+ +GA +PK G   +    +     +H 
Sbjct: 65  LGNYRLPGCELFVTLEPCVMCSGAMMHARLARVVFGAPDPKTGACGSVVNLFEQNQLNHH 124

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
            +   G+       +++DFF ERR
Sbjct: 125 TQFIGGVLADECSALLKDFFAERR 148


>gi|332971231|gb|EGK10194.1| zinc-binding domain protein [Desmospora sp. 8437]
          Length = 152

 Score =  110 bits (276), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 60/145 (41%), Positives = 84/145 (57%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           + +M  A+ EA+ A  + E+P+GAV V   +II R  N     +D TAHAE++AIR   R
Sbjct: 4   DQWMMEAIREAEQAEAKGEVPIGAVLVREGEIIGRGHNLRESHQDPTAHAEMIAIREAAR 63

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
           +L    L   +LYVTLEPC MCA AI L+R+  L YGA +PKGG              +H
Sbjct: 64  LLGGWRLAGCELYVTLEPCPMCAGAILLSRLDTLIYGAYDPKGGCAGTLMNLPRDDRFNH 123

Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149
             E+  GI EQ   ++++DFF++ R
Sbjct: 124 QVEVVGGILEQECGELLRDFFRKLR 148


>gi|281423636|ref|ZP_06254549.1| tRNA-specific adenosine deaminase [Prevotella oris F0302]
 gi|281402188|gb|EFB33019.1| tRNA-specific adenosine deaminase [Prevotella oris F0302]
          Length = 154

 Score =  110 bits (276), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 66/147 (44%), Positives = 87/147 (59%), Gaps = 5/147 (3%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
           K   +M  AL EA+ AA   EIP+GAV V  ++IISRA N   +L DVTAHAE+ AI   
Sbjct: 13  KDEQYMRKALYEAERAAEEGEIPIGAVIVCKDRIISRAHNLTEKLHDVTAHAEMQAITSA 72

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
             +L  + L +  LYVT+EPC MCA AI  A+I R+ YGAS+ K      G Q Y     
Sbjct: 73  ADLLGGKYLSDCTLYVTVEPCVMCAGAIGWAQIGRIVYGASDEK-----RGYQLYAPRAF 127

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           H    +  G+ E   RQ++Q+FFK++R
Sbjct: 128 HPKATVTRGVLEAECRQLMQEFFKQKR 154


>gi|319648541|ref|ZP_08002756.1| YaaJ protein [Bacillus sp. BT1B_CT2]
 gi|317389389|gb|EFV70201.1| YaaJ protein [Bacillus sp. BT1B_CT2]
          Length = 160

 Score =  110 bits (276), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 58/149 (38%), Positives = 84/149 (56%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M +   +M  A+ EA+ A  + E+P+GAV VL+ +II+RA N     +   AHAE+L I 
Sbjct: 1   MTQDEFYMKEAVNEARKAEEKGEVPIGAVLVLDGEIIARAHNLRETEQRSVAHAEMLVIE 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
             CR L    L    LYVTLEPC MCA A  L+RI ++ +GAS+PKGG            
Sbjct: 61  EACRKLGTWRLERAVLYVTLEPCPMCAGAAVLSRIDKVVFGASDPKGGCAGTLMNLLQEE 120

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  E+  G+ E+   +++ DFF++ R
Sbjct: 121 RFNHQAEVVSGVMEEECGRMLSDFFRKLR 149


>gi|70727433|ref|YP_254349.1| hypothetical protein SH2434 [Staphylococcus haemolyticus JCSC1435]
 gi|68448159|dbj|BAE05743.1| unnamed protein product [Staphylococcus haemolyticus JCSC1435]
          Length = 157

 Score =  110 bits (276), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 58/149 (38%), Positives = 86/149 (57%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M     +M  A+EEA+ A    E+P+GA+ V NN++I+ A N     +  TAHAE +AI 
Sbjct: 1   MANDEYYMKLAIEEAKKAQKLGEVPIGAIIVKNNEVIASAHNLRETAQLPTAHAEHIAIE 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              ++L    L    LYVTLEPC MCA AI ++RI ++ YGA++PKGG   +       +
Sbjct: 61  RASKVLGSWRLEGCTLYVTLEPCVMCAGAIVMSRIPKVVYGATDPKGGCSGSLMNLLEES 120

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  EI  G+ EQ    ++++FF+E R
Sbjct: 121 QFNHRAEIVKGVLEQECGDLLRNFFRELR 149


>gi|296114354|ref|ZP_06833008.1| CMP/dCMP deaminase [Gluconacetobacter hansenii ATCC 23769]
 gi|295979115|gb|EFG85839.1| CMP/dCMP deaminase [Gluconacetobacter hansenii ATCC 23769]
          Length = 173

 Score =  110 bits (276), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 51/117 (43%), Positives = 76/117 (64%)

Query: 33  NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISL 92
           +  I+S AGNR+ E  D +AHAE+LA+R   RI   + L +  LYVTLEPC MCA A   
Sbjct: 55  DGAILSCAGNRSEEWHDPSAHAEMLALREATRIRGGQRLSDCALYVTLEPCPMCAGAAVH 114

Query: 93  ARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
            RI R+ +GA +PKGGG+++G + +    C H PE+  G+ E+ ++ +++ FF+ RR
Sbjct: 115 FRIGRILFGAYDPKGGGVDHGPRLFARPGCLHRPEVIGGLREREAQDMLRAFFRNRR 171


>gi|152997998|ref|YP_001342833.1| zinc-binding CMP/dCMP deaminase [Marinomonas sp. MWYL1]
 gi|150838922|gb|ABR72898.1| CMP/dCMP deaminase zinc-binding [Marinomonas sp. MWYL1]
          Length = 162

 Score =  110 bits (276), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 60/129 (46%), Positives = 80/129 (62%), Gaps = 2/129 (1%)

Query: 22  NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81
           NEIPVGA+ VL+ +II    N    L D TAHAEI AIRM C+ ++   LP   LYVTLE
Sbjct: 21  NEIPVGAIVVLDGEIIGEGYNAPISLCDPTAHAEIQAIRMACKTINNYRLPGATLYVTLE 80

Query: 82  PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGI-SEQRSRQI 140
           PC+MCA A+  ARI R+ Y A+ PK G +E+   F+     +H  ++  G+ +E  S Q+
Sbjct: 81  PCSMCAGAMVHARIDRVVYAATEPKSGIVESQGHFFEAPFLNHKVKVESGVLAEMASLQL 140

Query: 141 IQDFFKERR 149
            Q FF+ RR
Sbjct: 141 TQ-FFQYRR 148


>gi|163119172|ref|YP_077304.2| putative cytidine/deoxycytidylate deaminase, zinc-binding region
           YaaJ [Bacillus licheniformis ATCC 14580]
 gi|145902675|gb|AAU21666.2| putative Cytidine/deoxycytidylate deaminase, zinc-binding region
           YaaJ [Bacillus licheniformis ATCC 14580]
          Length = 196

 Score =  110 bits (276), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 58/149 (38%), Positives = 84/149 (56%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M +   +M  A+ EA+ A  + E+P+GAV VL+ +II+RA N     +   AHAE+L I 
Sbjct: 37  MTQDEFYMKEAVNEARKAEEKGEVPIGAVLVLDGEIIARAHNLRETEQRSVAHAEMLVIE 96

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
             CR L    L    LYVTLEPC MCA A  L+RI ++ +GAS+PKGG            
Sbjct: 97  EACRKLGTWRLERAVLYVTLEPCPMCAGAAVLSRIDKVVFGASDPKGGCAGTLMNLLQEE 156

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  E+  G+ E+   +++ DFF++ R
Sbjct: 157 RFNHQAEVVSGVMEEECGRMLSDFFRKLR 185


>gi|325688867|gb|EGD30875.1| tRNA-specific adenosine deaminase [Streptococcus sanguinis SK115]
          Length = 156

 Score =  110 bits (276), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 61/149 (40%), Positives = 86/149 (57%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +++  VFM  AL+EA+ A   +EIP+G V V   KII R  N   EL+    HAEI+AI 
Sbjct: 6   IEEKEVFMREALKEAEIALAHDEIPIGCVLVKEGKIIGRGHNAREELQRAVMHAEIMAIE 65

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              R  +   L +  L+VT+EPC MC+ AI LARI  + YGA+N K G   +     T  
Sbjct: 66  EANRHENSWRLLDTTLFVTIEPCVMCSGAIGLARIPHVVYGAANQKFGAAGSLYDILTDE 125

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  E+  G+ ++   QI+QDFF++RR
Sbjct: 126 RLNHRVEVEVGVLQEECVQIMQDFFRQRR 154


>gi|294102217|ref|YP_003554075.1| CMP/dCMP deaminase zinc-binding protein [Aminobacterium colombiense
           DSM 12261]
 gi|293617197|gb|ADE57351.1| CMP/dCMP deaminase zinc-binding protein [Aminobacterium colombiense
           DSM 12261]
          Length = 156

 Score =  110 bits (276), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 62/143 (43%), Positives = 87/143 (60%), Gaps = 2/143 (1%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM+ AL+EA+ AA   E+PV A+ V NN++I + G+ ++ L D TAHAEI+AIR     L
Sbjct: 10  FMNMALDEARKAAEHGEVPVAALVVRNNEVIGK-GSNSKHL-DPTAHAEIIAIREATERL 67

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L    LYVTLEPC MCA AI L+RI+ L YGA++P+ G           +  +H  
Sbjct: 68  GTWNLRGSTLYVTLEPCPMCAGAIVLSRIKCLVYGAADPRAGACGTLYNIVQDSRLNHRC 127

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+  G+  Q S  ++ D+FK+RR
Sbjct: 128 EVIKGVLAQESANLLWDYFKKRR 150


>gi|289435993|ref|YP_003465865.1| cytidine/deoxycytidylate deaminase family protein [Listeria
           seeligeri serovar 1/2b str. SLCC3954]
 gi|289172237|emb|CBH28783.1| cytidine/deoxycytidylate deaminase family protein [Listeria
           seeligeri serovar 1/2b str. SLCC3954]
          Length = 156

 Score =  110 bits (275), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 58/143 (40%), Positives = 83/143 (58%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  AL EA+ A    E+P+GAV VL+ +II RA N     ++   HAE+LAI+  C   
Sbjct: 6   FMQQALVEAEKAREIGEVPIGAVVVLDGEIIGRAHNLRETSQNAVTHAELLAIQDACNHQ 65

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L   +LYVTLEPC MC+ AI L+RI ++YYGA +PK G   +          +H+ 
Sbjct: 66  KSWRLSGAELYVTLEPCPMCSGAILLSRIDKVYYGAKDPKAGTAGSLMNLLQDDRFNHTC 125

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+  G+ E  S ++++ FF+E R
Sbjct: 126 EVESGLMEAESSEMLKSFFQELR 148


>gi|255534275|ref|YP_003094646.1| tRNA-specific adenosine-34 deaminase [Flavobacteriaceae bacterium
           3519-10]
 gi|255340471|gb|ACU06584.1| tRNA-specific adenosine-34 deaminase [Flavobacteriaceae bacterium
           3519-10]
          Length = 143

 Score =  110 bits (275), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 57/143 (39%), Positives = 81/143 (56%), Gaps = 6/143 (4%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  AL+EAQ A  ++E+P+G + V NN+II++A N    L DVTAHAE+ AI      L
Sbjct: 7   YMKIALQEAQQALEKDEVPIGCIIVSNNRIIAKAHNLTEALNDVTAHAEMQAITSAANYL 66

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
             + L    LYVTLEPC MC  A+S ++I ++  GA + + G I            H   
Sbjct: 67  GGKYLQNCTLYVTLEPCVMCCGALSWSQISKVVIGARDEQRGFINKNLSI------HPKT 120

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           EI  G+ E    Q+++DFFK +R
Sbjct: 121 EIVLGVLENECSQLVKDFFKSKR 143


>gi|313631569|gb|EFR98838.1| tRNA-specific adenosine deaminase [Listeria seeligeri FSL N1-067]
          Length = 156

 Score =  110 bits (275), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 58/143 (40%), Positives = 83/143 (58%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  AL EA+ A    E+P+GAV VL+ +II RA N     ++   HAE+LAI+  C   
Sbjct: 6   FMQQALVEAEKAREIGEVPIGAVVVLDGEIIGRAHNLRETSQNAVTHAELLAIQDACNHQ 65

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L   +LYVTLEPC MC+ AI L+RI ++YYGA +PK G   +          +H+ 
Sbjct: 66  KSWRLSGAELYVTLEPCPMCSGAILLSRIDKVYYGAKDPKAGTAGSLMNLLQDDRFNHTC 125

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+  G+ E  S ++++ FF+E R
Sbjct: 126 EVESGLMEAESSEMLKSFFQELR 148


>gi|167766023|ref|ZP_02438076.1| hypothetical protein CLOSS21_00515 [Clostridium sp. SS2/1]
 gi|167712103|gb|EDS22682.1| hypothetical protein CLOSS21_00515 [Clostridium sp. SS2/1]
          Length = 161

 Score =  110 bits (275), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 58/149 (38%), Positives = 89/149 (59%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M +   +M  A+++A+ AA+  ++P+G V V ++KII+RA N+  + K   AHAE+LAI+
Sbjct: 1   MTQEEKYMKEAIKQAKKAAVIGDVPIGCVIVEDDKIIARAYNQRNKKKTTLAHAELLAIQ 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              + ++   L +  +Y+TLEPC MCA AI  ARI ++  GA NPK G   +      + 
Sbjct: 61  KASKKVNDWRLEDCTMYITLEPCQMCAGAIVQARIPKVVIGAMNPKAGCAGSVLNILQID 120

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  EI  GI E+   Q++ DFFKE R
Sbjct: 121 KFNHQVEIERGILEEECSQMLSDFFKELR 149


>gi|329113789|ref|ZP_08242560.1| Putative deaminase [Acetobacter pomorum DM001]
 gi|326696799|gb|EGE48469.1| Putative deaminase [Acetobacter pomorum DM001]
          Length = 151

 Score =  110 bits (275), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 57/143 (39%), Positives = 89/143 (62%), Gaps = 1/143 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  AL +A  AA   E+PVGAV + +   ++++AGNR  EL D +AHAE+L +R   +  
Sbjct: 7   MELALWQAHLAAANGEVPVGAVLLDSAGNVLAQAGNRVEELHDPSAHAEMLVMREAVQQR 66

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
             + L +  L+V+LEPC MCAAA++  R+ R+ +GA +PKGGG+E+G +        H  
Sbjct: 67  QGQKLADCTLFVSLEPCPMCAAAMAHFRLGRVVFGAYDPKGGGVEHGARLPHRPETLHRM 126

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+  G+ EQ S ++++ FF+  R
Sbjct: 127 EVIGGVREQESAEMLKTFFQTLR 149


>gi|228478058|ref|ZP_04062669.1| tRNA-specific adenosine deaminase [Streptococcus salivarius SK126]
 gi|228250238|gb|EEK09491.1| tRNA-specific adenosine deaminase [Streptococcus salivarius SK126]
          Length = 172

 Score =  110 bits (275), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 56/145 (38%), Positives = 85/145 (58%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           + FMS AL+EA+ +  + EIP+G V V + +++ R  N   EL     HAE++AI+   R
Sbjct: 10  DFFMSEALKEAEKSLDKAEIPIGCVIVKDGEVVGRGHNAREELNQAIMHAEVMAIQEANR 69

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
            +    L +  L+VT+EPC MC+ AI LARI ++ YGASN K GG  +          +H
Sbjct: 70  TVGNWRLLDCTLFVTIEPCVMCSGAIGLARIPKVIYGASNQKFGGAGSLYDILRDERLNH 129

Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149
             E+  G+ E+   +I+QDFF++ R
Sbjct: 130 RVEVETGVMEEECAKIMQDFFRQSR 154


>gi|326390318|ref|ZP_08211877.1| CMP/dCMP deaminase, zinc-binding [Thermoanaerobacter ethanolicus JW
           200]
 gi|325993595|gb|EGD52028.1| CMP/dCMP deaminase, zinc-binding [Thermoanaerobacter ethanolicus JW
           200]
          Length = 148

 Score =  110 bits (275), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 56/145 (38%), Positives = 81/145 (55%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           N FM  A+ EA+ +    E+PVGAV V + +II +  N+     D T HAEILAI+  C+
Sbjct: 3   NRFMEAAILEAKKSYQLGEVPVGAVIVKDGQIIGKGFNQKESSNDATTHAEILAIKEACK 62

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
            L    L +  +YVTLEPC MCA AI  +RI+R+Y GA + + G           +    
Sbjct: 63  TLGSWRLDDCSMYVTLEPCPMCAGAILESRIKRVYIGAESERTGAAGTVVDILNNSYLGS 122

Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149
             E+Y GI E+  + +++DFF+  R
Sbjct: 123 KTEVYFGIMEEECKTLLKDFFENLR 147


>gi|1296969|emb|CAA65178.1| orf150 [Porphyromonas gingivalis]
          Length = 150

 Score =  110 bits (275), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 62/143 (43%), Positives = 82/143 (57%), Gaps = 5/143 (3%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  ALEEA+ AA   EIP+GAV V   +I++RA NR   L D TAHAE+LAI M    +
Sbjct: 13  YMRIALEEARAAADEGEIPIGAVIVCKGQIVARAHNRVERLNDPTAHAEMLAITMAVDAI 72

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
             + L +  LYVT+EPC MCA A+   +I R+ YGAS PK      G + +T    H   
Sbjct: 73  GGKYLRDCTLYVTVEPCLMCAGALRWTQIPRVVYGASEPK-----VGYRLFTDHALHPKC 127

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
            +  GI    S  +++ FF ERR
Sbjct: 128 LVEGGILADESENLMRSFFAERR 150


>gi|332707760|ref|ZP_08427787.1| tRNA-adenosine deaminase [Lyngbya majuscula 3L]
 gi|332353463|gb|EGJ32976.1| tRNA-adenosine deaminase [Lyngbya majuscula 3L]
          Length = 163

 Score =  110 bits (275), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 65/144 (45%), Positives = 80/144 (55%), Gaps = 1/144 (0%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           +M+ A+E AQ A    E+PVGAV V N  K+I+   NR    KD TAHAEILA+R   + 
Sbjct: 17  WMTVAIEIAQKAGEAGEVPVGAVIVDNEGKLIATGENRRERDKDPTAHAEILALRAAGQQ 76

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           L    L    LYVTLEPC MCA AI LAR+  L YG  +PK G I         A  +H 
Sbjct: 77  LQSWHLNHCTLYVTLEPCPMCAGAIILARLGLLVYGVDDPKTGSIRTVANLPDSACSNHR 136

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
             +  GI E   R+ +Q +F ERR
Sbjct: 137 LPVLGGIMESVCREQLQSWFAERR 160


>gi|15606234|ref|NP_213612.1| hypothetical protein aq_903 [Aquifex aeolicus VF5]
 gi|6226405|sp|O67050|TADA_AQUAE RecName: Full=tRNA-specific adenosine deaminase
 gi|2983443|gb|AAC07025.1| hypothetical protein aq_903 [Aquifex aeolicus VF5]
          Length = 151

 Score =  110 bits (275), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 60/145 (41%), Positives = 89/145 (61%), Gaps = 5/145 (3%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           F+  AL EA+ A  + E+PVGA+ V   +IIS+A N   ELKD TAHAE+LAI+  CR L
Sbjct: 6   FLKVALREAKRAFEKGEVPVGAIIVKEGEIISKAHNSVEELKDPTAHAEMLAIKEACRRL 65

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH-- 124
           + + L   +LYVTLEPC MC+ A+ L+RI ++ + A + K GG+ +        T +H  
Sbjct: 66  NTKYLEGCELYVTLEPCIMCSYALVLSRIEKVIFSALDKKHGGVVSVFNILDEPTLNHRV 125

Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149
             E YP    + + +++ +FFK+ R
Sbjct: 126 KWEYYPL---EEASELLSEFFKKLR 147


>gi|317499420|ref|ZP_07957687.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Lachnospiraceae bacterium 5_1_63FAA]
 gi|316893292|gb|EFV15507.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Lachnospiraceae bacterium 5_1_63FAA]
          Length = 161

 Score =  110 bits (275), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 58/149 (38%), Positives = 89/149 (59%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M +   +M  A+++A+ AA+  ++P+G V V ++KII+RA N+  + K   AHAE+LAI+
Sbjct: 1   MTQEEKYMKEAIKQAKKAAVIGDVPIGCVIVEDDKIIARAYNQRNKKKTTLAHAELLAIQ 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              + ++   L +  +Y+TLEPC MCA AI  ARI ++  GA NPK G   +      + 
Sbjct: 61  KASKKVNDWRLEDCTMYITLEPCQMCAGAIVQARIPKVVIGAMNPKAGCAGSVLNILQID 120

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  EI  GI E+   Q++ DFFKE R
Sbjct: 121 KFNHQVEIERGILEEECSQMLSDFFKELR 149


>gi|169830233|ref|YP_001716215.1| CMP/dCMP deaminase [Candidatus Desulforudis audaxviator MP104C]
 gi|169637077|gb|ACA58583.1| CMP/dCMP deaminase, zinc-binding [Candidatus Desulforudis
           audaxviator MP104C]
          Length = 156

 Score =  110 bits (274), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 55/143 (38%), Positives = 80/143 (55%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  AL EA+ A  + E+PVGAV V +  II R  N      D +AHAE+LA+R   ++ 
Sbjct: 13  YMREALREAEKAYAKGEVPVGAVVVQDGTIIGRGHNLREADNDASAHAELLAMRQAAQVS 72

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L    +YVT+EPC MCA A+   R+RR+ YG ++PK G   +  +       +H  
Sbjct: 73  GDWRLSGATVYVTMEPCPMCAGALVQFRVRRVVYGTADPKAGAAGSVVELLREPRFNHQV 132

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+ PG+ E   R+I+Q FF+  R
Sbjct: 133 EVIPGVLEAECREIVQRFFRALR 155


>gi|319399688|gb|EFV87937.1| cytidine and deoxycytidylate deaminase zinc-binding region family
           protein [Staphylococcus epidermidis FRI909]
          Length = 168

 Score =  110 bits (274), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 58/149 (38%), Positives = 86/149 (57%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           MKK + +M  A++EA  A    E+P+GAV V  +++I+RA N    L+  TAHAE +AI 
Sbjct: 1   MKKNHDYMRLAIKEAHKAKALGEVPIGAVIVKEDQVIARAHNLRETLQQPTAHAEHIAIE 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
               ++    L E  LYVTLEPC MCA  I ++RI ++ YGA++PKGG   +        
Sbjct: 61  RASEVVGSWRLEECTLYVTLEPCVMCAGTIIMSRIPKVVYGATDPKGGCSGSLMNLLEQP 120

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H   +  GI E+   ++++ FFKE R
Sbjct: 121 QFNHRAIVEKGILEEECAELLRSFFKEIR 149


>gi|282858963|ref|ZP_06268101.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Prevotella bivia JCVIHMP010]
 gi|282588243|gb|EFB93410.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Prevotella bivia JCVIHMP010]
          Length = 150

 Score =  110 bits (274), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 60/149 (40%), Positives = 85/149 (57%), Gaps = 5/149 (3%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +KK   +M  AL+EA+ A    EIP+GA+ V  NKII+RA N    L DVTAHAE+ AI 
Sbjct: 7   VKKDIYYMQRALDEAKQAYKEGEIPIGAIVVCKNKIIARAHNLTETLHDVTAHAEMQAIT 66

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
           +    L  + L +  LYVT+EPC MCA A+  ++I+R+ +G  + K G  E     Y   
Sbjct: 67  IAANELGGKYLEDCTLYVTVEPCIMCAGALGWSQIKRVVFGCLDEKRGYHE-----YAPK 121

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             H    +  G+ +   + ++Q FFKERR
Sbjct: 122 ALHPKANVIGGVLDSECKALMQRFFKERR 150


>gi|319940016|ref|ZP_08014370.1| tRNA-specific adenosine deaminase [Streptococcus anginosus
           1_2_62CV]
 gi|319810730|gb|EFW07057.1| tRNA-specific adenosine deaminase [Streptococcus anginosus
           1_2_62CV]
          Length = 155

 Score =  110 bits (274), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 60/149 (40%), Positives = 86/149 (57%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +++   FM  AL+EA+ A + +EIP+G V V N +II R  N   EL+    HAE++AI 
Sbjct: 5   VEEKEFFMREALKEAEIALVNDEIPIGCVIVKNGEIIGRGHNAREELQRAVMHAEVMAIE 64

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              +      L +  L+VT+EPC MC+ AI LARI ++ YGA NPK G   +     T  
Sbjct: 65  KANQHEHSWRLLDTTLFVTIEPCVMCSGAIGLARIPQVIYGAKNPKFGAAGSLYDILTDE 124

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  E+  GI E    Q++QDFF++RR
Sbjct: 125 RLNHRVELETGILEVECAQMMQDFFRKRR 153


>gi|325298404|ref|YP_004258321.1| CMP/dCMP deaminase zinc-binding protein [Bacteroides salanitronis
           DSM 18170]
 gi|324317957|gb|ADY35848.1| CMP/dCMP deaminase zinc-binding protein [Bacteroides salanitronis
           DSM 18170]
          Length = 144

 Score =  110 bits (274), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 59/149 (39%), Positives = 82/149 (55%), Gaps = 5/149 (3%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M     +M  AL EA+ A+ R E+PVGAV V   +II+RA N    L DVTAHAE+ AI 
Sbjct: 1   MADDTFYMKQALAEAEKASARGEVPVGAVVVCQGRIIARAHNLTETLNDVTAHAEMQAIT 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
                L  + L +  LYVT+EPC MCA AI+ A++ +L +GA + K      G   Y  A
Sbjct: 61  AAANALGAKYLNDCTLYVTVEPCVMCAGAIAWAQLGKLVFGAGDEK-----RGYMRYAPA 115

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             H   E+  G+ +     ++  FF++RR
Sbjct: 116 ALHPKTEVVSGVLKDECAGLMTAFFRKRR 144


>gi|60593936|pdb|1WWR|A Chain A, Crystal Structure Of Trna Adenosine Deaminase Tada From
           Aquifex Aeolicus
 gi|60593937|pdb|1WWR|B Chain B, Crystal Structure Of Trna Adenosine Deaminase Tada From
           Aquifex Aeolicus
 gi|60593938|pdb|1WWR|C Chain C, Crystal Structure Of Trna Adenosine Deaminase Tada From
           Aquifex Aeolicus
 gi|60593939|pdb|1WWR|D Chain D, Crystal Structure Of Trna Adenosine Deaminase Tada From
           Aquifex Aeolicus
          Length = 171

 Score =  110 bits (274), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 60/145 (41%), Positives = 89/145 (61%), Gaps = 5/145 (3%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           F+  AL EA+ A  + E+PVGA+ V   +IIS+A N   ELKD TAHAE+LAI+  CR L
Sbjct: 26  FLKVALREAKRAFEKGEVPVGAIIVKEGEIISKAHNSVEELKDPTAHAEMLAIKEACRRL 85

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH-- 124
           + + L   +LYVTLEPC MC+ A+ L+RI ++ + A + K GG+ +        T +H  
Sbjct: 86  NTKYLEGCELYVTLEPCIMCSYALVLSRIEKVIFSALDKKHGGVVSVFNILDEPTLNHRV 145

Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149
             E YP    + + +++ +FFK+ R
Sbjct: 146 KWEYYPL---EEASELLSEFFKKLR 167


>gi|314932786|ref|ZP_07840155.1| cytidine/deoxycytidylate deaminase family protein [Staphylococcus
           caprae C87]
 gi|313654467|gb|EFS18220.1| cytidine/deoxycytidylate deaminase family protein [Staphylococcus
           caprae C87]
          Length = 168

 Score =  110 bits (274), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 59/149 (39%), Positives = 84/149 (56%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M+    +M  A++EAQ A    E+P+GAV V N+++I+ A N    L+  TAHAE +AI 
Sbjct: 1   MRTDKDYMRLAIKEAQKAQALGEVPIGAVIVKNDQVIAHAHNLRESLQLPTAHAEHIAIE 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              +++    L E  LYVTLEPC MCA AI ++RI R+ YGA +PKGG   +        
Sbjct: 61  RASKVVGSWRLEECTLYVTLEPCVMCAGAIVMSRIPRVVYGAVDPKGGCTGSLMNLLEKP 120

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H   +  GI E     +++DFFK  R
Sbjct: 121 QFNHRAIVESGILENECSTLLRDFFKNIR 149


>gi|62185341|ref|YP_220126.1| putative cytidine/deoxycytidylate deaminase family protein
           [Chlamydophila abortus S26/3]
 gi|62148408|emb|CAH64175.1| putative cytidine/deoxycytidylate deaminase family protein
           [Chlamydophila abortus S26/3]
          Length = 157

 Score =  110 bits (274), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 61/149 (40%), Positives = 86/149 (57%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           ++K   FM+ AL+EA+ A   +E+PVG V V +NKII+R  N   +L+D TAHAEIL I 
Sbjct: 3   IEKDIFFMNQALKEARQAYDEDEVPVGCVIVKDNKIIARGHNTTEKLQDPTAHAEILCIG 62

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              + L    L +  LY TLEPC MCA AI LARIRR+ + A + + G   +    +   
Sbjct: 63  AAAQYLENWRLVDTVLYCTLEPCLMCAGAIQLARIRRIVWAAPDLRLGAGGSWLNVFKEK 122

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
              H  E + GI    + Q+++ FF E+R
Sbjct: 123 HPFHQVECFFGICCADAEQLMKQFFIEKR 151


>gi|83591989|ref|YP_425741.1| tRNA-adenosine deaminase [Rhodospirillum rubrum ATCC 11170]
 gi|83574903|gb|ABC21454.1| tRNA-adenosine deaminase [Rhodospirillum rubrum ATCC 11170]
          Length = 159

 Score =  110 bits (274), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 53/129 (41%), Positives = 77/129 (59%), Gaps = 1/129 (0%)

Query: 22  NEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80
            E+PVGAV      + ++   NR     D TAHAEILAIR  C       LP+  L+VTL
Sbjct: 31  GEVPVGAVITDAGGRPLAACANRTETDHDPTAHAEILAIRAACARRGDARLPDCTLWVTL 90

Query: 81  EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140
           EPC MCA+AI  AR+ R+ +GA +PKGG +++G + +    C H PE+  G++E  +  +
Sbjct: 91  EPCPMCASAIVHARLARVIFGAYDPKGGAVDHGVRLFAHPGCLHRPEVIGGMAESAAATL 150

Query: 141 IQDFFKERR 149
           ++ FF+  R
Sbjct: 151 LRGFFQALR 159


>gi|227510688|ref|ZP_03940737.1| possible guanine deaminase [Lactobacillus brevis subsp. gravesensis
           ATCC 27305]
 gi|227189809|gb|EEI69876.1| possible guanine deaminase [Lactobacillus brevis subsp. gravesensis
           ATCC 27305]
          Length = 157

 Score =  110 bits (274), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 57/143 (39%), Positives = 82/143 (57%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
           K   FM  AL EAQ A L  E+P+GAV   + +II R  N    L D  AHAEI+AI   
Sbjct: 5   KDEKFMKMALIEAQKAYLIGEVPIGAVITQDGQIIGRGHNLREHLNDGVAHAEIMAIEEA 64

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
           CR L    L + +LYVT+EPC MC+ AI  +RI R+ +GA + K G + +  +    +  
Sbjct: 65  CRYLRSWRLVDCELYVTIEPCLMCSGAIVNSRIDRVVFGARDKKAGAVRSLYKVLEDSRL 124

Query: 123 HHSPEIYPGISEQRSRQIIQDFF 145
           +H+ E+  G+ +    +I++DFF
Sbjct: 125 NHNVEVLEGVLQPACSKIMKDFF 147


>gi|221067789|ref|ZP_03543894.1| CMP/dCMP deaminase zinc-binding [Comamonas testosteroni KF-1]
 gi|220712812|gb|EED68180.1| CMP/dCMP deaminase zinc-binding [Comamonas testosteroni KF-1]
          Length = 463

 Score =  110 bits (274), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 57/143 (39%), Positives = 82/143 (57%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  ALE+A+ AA   E+PVGAV V + ++I R  N     +D TAHAE+LA+R   R L
Sbjct: 11  FMRQALEQARCAAACGEVPVGAVVVKDGQVIGRGHNSPLSAQDPTAHAEVLALREAARTL 70

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L    LYVTLEPCTMC+ A+  AR+  + YGA+ P+ G   +    +  +T +H  
Sbjct: 71  GNYRLEGCTLYVTLEPCTMCSGAMLHARVDAVVYGAAEPRTGAAGSVLDVFGYSTINHQT 130

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
            +  G+   +   +I +FF+ RR
Sbjct: 131 RVLRGVLAAQCSALIAEFFQLRR 153


>gi|295425582|ref|ZP_06818269.1| cytidine/deoxycytidylate deaminase [Lactobacillus amylolyticus DSM
           11664]
 gi|295064598|gb|EFG55519.1| cytidine/deoxycytidylate deaminase [Lactobacillus amylolyticus DSM
           11664]
          Length = 166

 Score =  110 bits (274), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 52/144 (36%), Positives = 87/144 (60%), Gaps = 1/144 (0%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           +M  A+ EA+ A  ++E+P+GA+ V  + +++ +  NR    +D T HAE++AIR  C+ 
Sbjct: 10  YMQLAIIEAKKAERQDEVPIGAIVVAPDGQVVGKGYNRRELDQDATQHAEMIAIREACKN 69

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           +    L +  L+VTLEPC MCA AI  ARI+ +Y+GA +PK G   +    +T+   +H 
Sbjct: 70  IGFWRLIDCSLFVTLEPCPMCAGAIINARIKDVYFGAMDPKAGAAGSVVDLFTVEKFNHH 129

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
           P++  G+ +    Q++ DFF+  R
Sbjct: 130 PQVIRGLYQDECSQMLTDFFRAIR 153


>gi|254882842|ref|ZP_05255552.1| cytosine deaminase [Bacteroides sp. 4_3_47FAA]
 gi|319643397|ref|ZP_07998023.1| cytosine/adenosine deaminase [Bacteroides sp. 3_1_40A]
 gi|254835635|gb|EET15944.1| cytosine deaminase [Bacteroides sp. 4_3_47FAA]
 gi|317385026|gb|EFV65979.1| cytosine/adenosine deaminase [Bacteroides sp. 3_1_40A]
          Length = 144

 Score =  110 bits (274), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 61/149 (40%), Positives = 81/149 (54%), Gaps = 5/149 (3%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M     +M  AL EA  AA + E+PVGAV V  ++II R  N    L DVTAHAE+ AI 
Sbjct: 1   MADDTYYMKQALMEAVKAAEQGEVPVGAVVVCRDRIIGRGHNLTETLNDVTAHAEMQAIT 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
                L  + L E  LYVT+EPC MCA AI+ A+  +L +GA +PK      G Q Y   
Sbjct: 61  AAANTLGGKYLNECTLYVTVEPCVMCAGAIAWAQTGKLVFGAEDPK-----RGYQKYAPD 115

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             H    +  GI      ++++DFFK++R
Sbjct: 116 ALHPKTIVVKGILADECVRLMKDFFKKKR 144


>gi|324989861|gb|EGC21804.1| tRNA-specific adenosine deaminase [Streptococcus sanguinis SK353]
 gi|325686683|gb|EGD28709.1| tRNA-specific adenosine deaminase [Streptococcus sanguinis SK72]
          Length = 156

 Score =  110 bits (274), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 61/149 (40%), Positives = 85/149 (57%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +++  VFM  AL+EA+ A   +EIP+G V V   KII R  N   EL+    HAEI+AI 
Sbjct: 6   IEEKEVFMREALKEAEIALAHDEIPIGCVLVKEGKIIGRGHNAREELQRAVMHAEIMAIE 65

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              R  +   L +  L+VT+EPC MC+ AI LARI  + YGA+N K G   +     T  
Sbjct: 66  EANRHENSWRLLDTTLFVTIEPCVMCSGAIGLARIPHVVYGAANQKFGAAGSLYDILTDE 125

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  E+  G+ ++   QI+QDFF+ RR
Sbjct: 126 RLNHRVEVEVGVLQEECAQIMQDFFRNRR 154


>gi|228472860|ref|ZP_04057617.1| cytidine/deoxycytidylate deaminase family protein [Capnocytophaga
           gingivalis ATCC 33624]
 gi|228275442|gb|EEK14219.1| cytidine/deoxycytidylate deaminase family protein [Capnocytophaga
           gingivalis ATCC 33624]
          Length = 145

 Score =  109 bits (273), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 59/143 (41%), Positives = 84/143 (58%), Gaps = 6/143 (4%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  AL+EAQ A  + E+PVGAV  +  +II++A N   +L DVTAHAE+ AI      L
Sbjct: 8   FMQKALQEAQIAFEQGEVPVGAVITIGERIIAKAHNLTEKLTDVTAHAEMQAITAASEYL 67

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
             + L +  LYVTLEPC MCA A+  ++I ++ YGA++ K G    G         H   
Sbjct: 68  GGKYLMDCTLYVTLEPCVMCAGALYWSQIGKVVYGATDSKRGYHLFGNLL------HPKT 121

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           ++  G+ E+   QI++DFF +RR
Sbjct: 122 QVVQGVLEEPCSQIVKDFFLQRR 144


>gi|167765018|ref|ZP_02437139.1| hypothetical protein BACSTE_03412 [Bacteroides stercoris ATCC
           43183]
 gi|167697687|gb|EDS14266.1| hypothetical protein BACSTE_03412 [Bacteroides stercoris ATCC
           43183]
          Length = 144

 Score =  109 bits (273), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 60/143 (41%), Positives = 79/143 (55%), Gaps = 5/143 (3%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  AL EAQ A  R E+PVGAV V  ++II+RA N    L DVTAHAE+ AI      L
Sbjct: 6   YMKQALLEAQKAGERGEVPVGAVVVCKDRIIARAHNLTETLTDVTAHAEMQAITAAAATL 65

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
             + L E  LYVT+EPC MCA AI+ A++ RL +GA + K      G Q Y     H   
Sbjct: 66  GGKYLNECTLYVTVEPCVMCAGAIAWAQMGRLVFGAEDEK-----RGYQRYAPKALHPKT 120

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
            +  G+       +++DFF  +R
Sbjct: 121 AVVKGVLADECAALMKDFFAAKR 143


>gi|150004434|ref|YP_001299178.1| putative cytosine/adenosine deaminase [Bacteroides vulgatus ATCC
           8482]
 gi|212695454|ref|ZP_03303582.1| hypothetical protein BACDOR_05008 [Bacteroides dorei DSM 17855]
 gi|237708840|ref|ZP_04539321.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
 gi|237724273|ref|ZP_04554754.1| cytosine deaminase [Bacteroides sp. D4]
 gi|265755901|ref|ZP_06090368.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
 gi|294775508|ref|ZP_06741020.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Bacteroides vulgatus PC510]
 gi|149932858|gb|ABR39556.1| putative cytosine/adenosine deaminase [Bacteroides vulgatus ATCC
           8482]
 gi|212661991|gb|EEB22565.1| hypothetical protein BACDOR_05008 [Bacteroides dorei DSM 17855]
 gi|229437461|gb|EEO47538.1| cytosine deaminase [Bacteroides dorei 5_1_36/D4]
 gi|229457266|gb|EEO62987.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
 gi|263233979|gb|EEZ19580.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
 gi|294450653|gb|EFG19141.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Bacteroides vulgatus PC510]
          Length = 144

 Score =  109 bits (273), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 60/149 (40%), Positives = 81/149 (54%), Gaps = 5/149 (3%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M     +M  AL EA  AA + E+PVGAV V  ++II R  N    L DVTAHAE+ A+ 
Sbjct: 1   MADDTYYMKQALMEAVKAAEQGEVPVGAVVVCRDRIIGRGHNLTETLNDVTAHAEMQAVT 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
                L  + L E  LYVT+EPC MCA AI+ A+  +L +GA +PK      G Q Y   
Sbjct: 61  AAANTLGGKYLNECTLYVTVEPCVMCAGAIAWAQTGKLVFGAEDPK-----RGYQKYAPD 115

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             H    +  GI      ++++DFFK++R
Sbjct: 116 ALHPKTIVVKGILADECARLMKDFFKKKR 144


>gi|293570161|ref|ZP_06681239.1| tRNA-specific adenosine deaminase [Enterococcus faecium E1071]
 gi|291587310|gb|EFF19196.1| tRNA-specific adenosine deaminase [Enterococcus faecium E1071]
          Length = 171

 Score =  109 bits (273), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 54/139 (38%), Positives = 78/139 (56%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  AL EA+ A + +E+P+GAV VL+ K+I R  N     +D T HAE+LAI+  C  +
Sbjct: 14  WMRLALAEAKKAEMLHEVPIGAVVVLDGKVIGRGYNLRETTQDATTHAEMLAIKEACEKV 73

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  L+VTLEPC MC+ A+ L+R+  +Y+GA +PKGG              +H  
Sbjct: 74  GSWRLEDAALFVTLEPCPMCSGAMILSRVAEVYFGAYDPKGGTAGTLMNLLEDERFNHQA 133

Query: 127 EIYPGISEQRSRQIIQDFF 145
            +  GI E     I+ DFF
Sbjct: 134 YVEGGILEDECGMILTDFF 152


>gi|224538014|ref|ZP_03678553.1| hypothetical protein BACCELL_02903 [Bacteroides cellulosilyticus
           DSM 14838]
 gi|224520361|gb|EEF89466.1| hypothetical protein BACCELL_02903 [Bacteroides cellulosilyticus
           DSM 14838]
          Length = 144

 Score =  109 bits (273), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 60/145 (41%), Positives = 82/145 (56%), Gaps = 5/145 (3%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           N +M  AL EA+ A+ R E+PVGAV V  ++II+RA N    L DVTAHAE+ AI     
Sbjct: 4   NYYMKQALIEARKASERGEVPVGAVVVCKDRIIARAHNLTETLTDVTAHAEMQAITAAAS 63

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
            L  + L E  LYVT+EPC MCA AI+ A++ RL +GA + K      G Q Y     H 
Sbjct: 64  TLGGKYLNECTLYVTVEPCVMCAGAIAWAQMGRLVFGAGDEK-----RGYQRYASQALHP 118

Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149
              +  G+  +    +++DFF  +R
Sbjct: 119 KTAVSQGVLGEECAVLMKDFFAAKR 143


>gi|27467245|ref|NP_763882.1| Cu binding protein (Mn oxidation [Staphylococcus epidermidis ATCC
           12228]
 gi|27314788|gb|AAO03924.1|AE016745_23 Cu binding protein (Mn oxidation [Staphylococcus epidermidis ATCC
           12228]
 gi|329734672|gb|EGG70979.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Staphylococcus epidermidis VCU028]
          Length = 168

 Score =  109 bits (273), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 58/149 (38%), Positives = 84/149 (56%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           MKK + +M  A+ EA  A    E+P+GAV V   ++I+RA N    L+  TAHAE +AI 
Sbjct: 1   MKKNHDYMRLAINEAHKAKALGEVPIGAVIVKEGQVIARAHNLRETLQQPTAHAEHIAIE 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
               ++    L E  LYVTLEPC MCA  I ++RI ++ YGA++PKGG   +        
Sbjct: 61  RASEVVGSWRLEECTLYVTLEPCVMCAGTIIMSRIPKVVYGATDPKGGCSGSLMNLLEQP 120

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H   +  GI E+   ++++ FFKE R
Sbjct: 121 QFNHRATVEKGILEEECAELLRSFFKEIR 149


>gi|197335350|ref|YP_002155408.1| tRNA-specific adenosine deaminase [Vibrio fischeri MJ11]
 gi|197316840|gb|ACH66287.1| tRNA-specific adenosine deaminase [Vibrio fischeri MJ11]
          Length = 174

 Score =  109 bits (273), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 59/144 (40%), Positives = 82/144 (56%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           +  + +M  A+E A  A    E+PVGAV VL+++II    NR+    D TAHAE++AI+ 
Sbjct: 8   RDASFYMQRAMELAAIAEQEGEVPVGAVIVLDDEIIGEGWNRSISTHDATAHAEMMAIKQ 67

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
               +    L +  LYVTLEPC MCA AI  +RI+R+ +GAS+ K G   +    +T AT
Sbjct: 68  AGSKIENYRLVDATLYVTLEPCPMCAGAIVHSRIKRVIFGASDMKTGASGSVINLFTSAT 127

Query: 122 CHHSPEIYPGISEQRSRQIIQDFF 145
             HS E   G+ E   R  +Q FF
Sbjct: 128 AFHSVECESGVMEDACRSQLQAFF 151


>gi|69245245|ref|ZP_00603323.1| Cytidine/deoxycytidylate deaminase, zinc-binding region
           [Enterococcus faecium DO]
 gi|257880130|ref|ZP_05659783.1| cytidine/deoxycytidylate deaminase [Enterococcus faecium 1,230,933]
 gi|257882362|ref|ZP_05662015.1| cytidine/deoxycytidylate deaminase [Enterococcus faecium 1,231,502]
 gi|257885559|ref|ZP_05665212.1| cytidine/deoxycytidylate deaminase [Enterococcus faecium 1,231,501]
 gi|257891221|ref|ZP_05670874.1| cytidine/deoxycytidylate deaminase [Enterococcus faecium 1,231,410]
 gi|257894033|ref|ZP_05673686.1| cytidine/deoxycytidylate deaminase [Enterococcus faecium 1,231,408]
 gi|258614535|ref|ZP_05712305.1| cytidine/deoxycytidylate deaminase family protein [Enterococcus
           faecium DO]
 gi|260560261|ref|ZP_05832437.1| cytidine/deoxycytidylate deaminase [Enterococcus faecium C68]
 gi|293560645|ref|ZP_06677132.1| tRNA-specific adenosine deaminase [Enterococcus faecium E1162]
 gi|294617818|ref|ZP_06697430.1| tRNA-specific adenosine deaminase [Enterococcus faecium E1679]
 gi|294621156|ref|ZP_06700343.1| tRNA-specific adenosine deaminase [Enterococcus faecium U0317]
 gi|314938786|ref|ZP_07846059.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Enterococcus faecium TX0133a04]
 gi|314941552|ref|ZP_07848438.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Enterococcus faecium TX0133C]
 gi|314947607|ref|ZP_07851016.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Enterococcus faecium TX0082]
 gi|314951363|ref|ZP_07854416.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Enterococcus faecium TX0133A]
 gi|314993109|ref|ZP_07858496.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Enterococcus faecium TX0133B]
 gi|314996760|ref|ZP_07861775.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Enterococcus faecium TX0133a01]
 gi|68195920|gb|EAN10354.1| Cytidine/deoxycytidylate deaminase, zinc-binding region
           [Enterococcus faecium DO]
 gi|257814358|gb|EEV43116.1| cytidine/deoxycytidylate deaminase [Enterococcus faecium 1,230,933]
 gi|257818020|gb|EEV45348.1| cytidine/deoxycytidylate deaminase [Enterococcus faecium 1,231,502]
 gi|257821415|gb|EEV48545.1| cytidine/deoxycytidylate deaminase [Enterococcus faecium 1,231,501]
 gi|257827581|gb|EEV54207.1| cytidine/deoxycytidylate deaminase [Enterococcus faecium 1,231,410]
 gi|257830412|gb|EEV57019.1| cytidine/deoxycytidylate deaminase [Enterococcus faecium 1,231,408]
 gi|260073606|gb|EEW61932.1| cytidine/deoxycytidylate deaminase [Enterococcus faecium C68]
 gi|291595929|gb|EFF27210.1| tRNA-specific adenosine deaminase [Enterococcus faecium E1679]
 gi|291599272|gb|EFF30302.1| tRNA-specific adenosine deaminase [Enterococcus faecium U0317]
 gi|291605396|gb|EFF34843.1| tRNA-specific adenosine deaminase [Enterococcus faecium E1162]
 gi|313589110|gb|EFR67955.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Enterococcus faecium TX0133a01]
 gi|313592389|gb|EFR71234.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Enterococcus faecium TX0133B]
 gi|313596469|gb|EFR75314.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Enterococcus faecium TX0133A]
 gi|313599640|gb|EFR78483.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Enterococcus faecium TX0133C]
 gi|313641895|gb|EFS06475.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Enterococcus faecium TX0133a04]
 gi|313645848|gb|EFS10428.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Enterococcus faecium TX0082]
          Length = 171

 Score =  109 bits (273), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 54/139 (38%), Positives = 78/139 (56%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  AL EA+ A + +E+P+GAV VL+ K+I R  N     +D T HAE+LAI+  C  +
Sbjct: 14  WMRLALAEAKKAEMLHEVPIGAVVVLDGKVIGRGYNLRETTQDATTHAEMLAIKEACEKV 73

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  L+VTLEPC MC+ A+ L+R+  +Y+GA +PKGG              +H  
Sbjct: 74  GSWRLEDAALFVTLEPCPMCSGAMILSRVAEVYFGAYDPKGGTAGTLMNLLEDERFNHQA 133

Query: 127 EIYPGISEQRSRQIIQDFF 145
            +  GI E     I+ DFF
Sbjct: 134 YVEGGILEDECGMILTDFF 152


>gi|149182698|ref|ZP_01861165.1| probable cytidine/deoxycytidylate deaminase family protein
           [Bacillus sp. SG-1]
 gi|148849608|gb|EDL63791.1| probable cytidine/deoxycytidylate deaminase family protein
           [Bacillus sp. SG-1]
          Length = 173

 Score =  109 bits (273), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 54/144 (37%), Positives = 82/144 (56%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
           K   FM  A++EA+ A  + E+P+GAV VL+ ++I+ A N     ++   HAE+LAI   
Sbjct: 4   KQEYFMKLAIDEAKKAEDKAEVPIGAVVVLDGEVIASAHNLRETTQNAVTHAELLAIEEA 63

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
           C+ L    L   +LYVTLEPC MC+ AI L+RI+ + YGA +PK G              
Sbjct: 64  CKKLGTWRLENAELYVTLEPCPMCSGAIILSRIKTVVYGAPDPKAGCAGTLMNLLEDDRF 123

Query: 123 HHSPEIYPGISEQRSRQIIQDFFK 146
           +H  E+ PG+ ++   Q++  FF+
Sbjct: 124 NHQCEVVPGVLQEECGQLLTHFFR 147


>gi|296131565|ref|YP_003638812.1| CMP/dCMP deaminase zinc-binding protein [Thermincola sp. JR]
 gi|296030143|gb|ADG80911.1| CMP/dCMP deaminase zinc-binding protein [Thermincola potens JR]
          Length = 155

 Score =  109 bits (273), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 53/144 (36%), Positives = 87/144 (60%), Gaps = 1/144 (0%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  ALEEA+ A    E+P+GAV V+ + +++RA N   + KD TAHAE++AI+   + L
Sbjct: 11  YMQLALEEARAAFKLGEVPIGAVIVIGDDVVARAHNMKEQWKDATAHAELVAIKEAVQKL 70

Query: 67  SQ-EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
                L +  LYVT+EPC MCA A+  +RI ++ YGA++PK G + +          +H 
Sbjct: 71  GHWRYLKDAALYVTIEPCPMCAGAMVQSRIEKVVYGAADPKAGAMGSLMNLAQDPRLNHR 130

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
            E+  G+ E+   +++++FF+  R
Sbjct: 131 VEVVAGVLEEECSELMKEFFRRLR 154


>gi|113867903|ref|YP_726392.1| cytosine deaminase [Ralstonia eutropha H16]
 gi|113526679|emb|CAJ93024.1| cytosine deaminase [Ralstonia eutropha H16]
          Length = 200

 Score =  109 bits (273), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 56/139 (40%), Positives = 82/139 (58%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  ALEEA+ A    E+PVGAV V N+ II+R  N      D +AHAE+ A+R   +++
Sbjct: 29  YMRAALEEARLAEAAGEVPVGAVVVWNDTIIARGHNLPIRSVDPSAHAEMQALRAAAQVI 88

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               +PE +LYVTLEPC MC+ AI  AR+R + +GA++PK G   +    +  A  +H  
Sbjct: 89  GNYRMPECELYVTLEPCVMCSGAILHARLRHVVFGAADPKTGAAGSVLNLFEQAQLNHQT 148

Query: 127 EIYPGISEQRSRQIIQDFF 145
            I  G+      Q+++DFF
Sbjct: 149 TIAGGVLADTCGQMLKDFF 167


>gi|29347644|ref|NP_811147.1| putative cytosine/adenosine deaminase [Bacteroides thetaiotaomicron
           VPI-5482]
 gi|29339545|gb|AAO77341.1| putative cytosine/adenosine deaminase [Bacteroides thetaiotaomicron
           VPI-5482]
          Length = 147

 Score =  109 bits (273), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 61/143 (42%), Positives = 78/143 (54%), Gaps = 5/143 (3%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  AL EA  AA R E+PVGAV V   +II+RA N    L DVTAHAE+ AI     +L
Sbjct: 9   FMKQALIEAGKAAERGEVPVGAVVVCKERIIARAHNLTETLNDVTAHAEMQAITAAANVL 68

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
             + L E  LYVT+EPC MCA AI+ A+  +L +GA + K      G Q Y     H   
Sbjct: 69  GGKYLNECTLYVTVEPCVMCAGAIAWAQTGKLVFGAEDDK-----RGYQRYAAQALHPKT 123

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
            +  GI       +++DFF  +R
Sbjct: 124 VVVKGILADECATLMKDFFASKR 146


>gi|315223581|ref|ZP_07865436.1| tRNA-specific adenosine deaminase [Capnocytophaga ochracea F0287]
 gi|314946497|gb|EFS98491.1| tRNA-specific adenosine deaminase [Capnocytophaga ochracea F0287]
          Length = 158

 Score =  109 bits (273), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 58/149 (38%), Positives = 83/149 (55%), Gaps = 6/149 (4%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M     FM  ALEEAQ A   +EIPVGA+  ++N+II++A N    L DVTAHAE+ AI 
Sbjct: 15  MNTDEYFMQKALEEAQLAFEEDEIPVGAIITIDNRIIAKAHNLTERLNDVTAHAEMQAIT 74

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
           M    L  + L    +Y+TLEPC MCA A+  +++ RL Y A +   G    G +     
Sbjct: 75  MAAHYLGGKYLTGCTMYLTLEPCAMCAGALYWSQLSRLVYAAPDTHRGYSVMGGKL---- 130

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             H   E+  GI  Q +  +++ FF+++R
Sbjct: 131 --HPKTEVVTGILSQEATALLKQFFQQKR 157


>gi|253572102|ref|ZP_04849506.1| cytosine deaminase [Bacteroides sp. 1_1_6]
 gi|298383486|ref|ZP_06993047.1| cytidine/deoxycytidylate deaminase family protein [Bacteroides sp.
           1_1_14]
 gi|251838282|gb|EES66369.1| cytosine deaminase [Bacteroides sp. 1_1_6]
 gi|298263090|gb|EFI05953.1| cytidine/deoxycytidylate deaminase family protein [Bacteroides sp.
           1_1_14]
          Length = 146

 Score =  109 bits (273), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 61/143 (42%), Positives = 78/143 (54%), Gaps = 5/143 (3%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  AL EA  AA R E+PVGAV V   +II+RA N    L DVTAHAE+ AI     +L
Sbjct: 8   FMKQALIEAGKAAERGEVPVGAVVVCKERIIARAHNLTETLNDVTAHAEMQAITAAANVL 67

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
             + L E  LYVT+EPC MCA AI+ A+  +L +GA + K      G Q Y     H   
Sbjct: 68  GGKYLNECTLYVTVEPCVMCAGAIAWAQTGKLVFGAEDDK-----RGYQRYAAQALHPKT 122

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
            +  GI       +++DFF  +R
Sbjct: 123 VVVKGILADECATLMKDFFASKR 145


>gi|325911630|ref|ZP_08174038.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Lactobacillus iners UPII 143-D]
 gi|325476616|gb|EGC79774.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Lactobacillus iners UPII 143-D]
          Length = 158

 Score =  109 bits (273), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 57/143 (39%), Positives = 83/143 (58%), Gaps = 1/143 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  A  EA  A  + EIP+GAV V     +I R  NR    +D T HAEI+AI+  C+ L
Sbjct: 11  MKLAFLEADKAEQQGEIPIGAVIVDAKGNLIGRGYNRRELDEDATRHAEIIAIQEACKNL 70

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
           +   L +  L+VTLEPC MCA AI  AR++ +YYGA +PK G   +    +     +H P
Sbjct: 71  NSWRLIDCSLFVTLEPCPMCAGAIINARLKNVYYGAFDPKAGACGSVVDLFAFTKFNHHP 130

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           +I+ G+  +++ Q +++FFK  R
Sbjct: 131 QIFGGLYREQAAQQLKNFFKNIR 153


>gi|329729486|gb|EGG65889.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Staphylococcus epidermidis VCU144]
          Length = 168

 Score =  109 bits (273), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 58/149 (38%), Positives = 84/149 (56%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           MKK + +M  A+ EA  A    E+P+GAV V   ++I+RA N    L+  TAHAE +AI 
Sbjct: 1   MKKNHDYMRLAINEAHKAKALGEVPIGAVIVKEGQVIARAHNLRETLQQPTAHAEHIAIE 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
               ++    L E  LYVTLEPC MCA  I ++RI ++ YGA++PKGG   +        
Sbjct: 61  RASEVVGSWRLEECTLYVTLEPCVMCAGTIIMSRIPKVVYGATDPKGGCSGSLMNLLEQP 120

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H   +  GI E+   ++++ FFKE R
Sbjct: 121 QFNHRATVEKGILEEECAELLRSFFKEIR 149


>gi|154484290|ref|ZP_02026738.1| hypothetical protein EUBVEN_02003 [Eubacterium ventriosum ATCC
           27560]
 gi|149734767|gb|EDM50684.1| hypothetical protein EUBVEN_02003 [Eubacterium ventriosum ATCC
           27560]
          Length = 178

 Score =  109 bits (273), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 57/148 (38%), Positives = 84/148 (56%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           KK N +M  A+++A+ AA   E+P+G V V  +KII R  NR    K+  +HAE+ AI+ 
Sbjct: 25  KKANKYMKEAIKQAKKAASIGEVPIGCVIVYQDKIIGRGYNRRMVDKNTLSHAELNAIKK 84

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
             + L    L + +LYVT EPC MCA AI  ARI+++Y G  NPK G   +      +  
Sbjct: 85  ASKKLDDWRLDDCELYVTTEPCQMCAGAIVQARIKKVYIGCMNPKAGCAGSIMNLLQVDK 144

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H  E+  GI E+    +++DFF+  R
Sbjct: 145 FNHQVEMEKGILEEECSNLLKDFFRNLR 172


>gi|57866115|ref|YP_187800.1| cytidine/deoxycytidylate deaminase family protein [Staphylococcus
           epidermidis RP62A]
 gi|242241897|ref|ZP_04796342.1| deaminase [Staphylococcus epidermidis W23144]
 gi|251809981|ref|ZP_04824454.1| deaminase [Staphylococcus epidermidis BCM-HMP0060]
 gi|282874984|ref|ZP_06283859.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Staphylococcus epidermidis SK135]
 gi|57636773|gb|AAW53561.1| cytidine/deoxycytidylate deaminase family protein [Staphylococcus
           epidermidis RP62A]
 gi|242234675|gb|EES36987.1| deaminase [Staphylococcus epidermidis W23144]
 gi|251806524|gb|EES59181.1| deaminase [Staphylococcus epidermidis BCM-HMP0060]
 gi|281296312|gb|EFA88831.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Staphylococcus epidermidis SK135]
          Length = 168

 Score =  109 bits (273), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 58/149 (38%), Positives = 85/149 (57%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           MKK + +M  A+ EA  A    E+P+GAV V  +++I+RA N    L+  TAHAE +AI 
Sbjct: 1   MKKNHDYMRLAINEAHKAKALGEVPIGAVIVKEDQVIARAHNLRETLQQPTAHAEHIAIE 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
               ++    L E  LYVTLEPC MCA  I ++RI ++ YGA++PKGG   +        
Sbjct: 61  RASEVVGSWRLEECTLYVTLEPCVMCAGTIIMSRIPKVVYGATDPKGGCSGSLMNLLEQP 120

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H   +  GI E+   ++++ FFKE R
Sbjct: 121 QFNHRAIVEKGILEEECAELLRSFFKEIR 149


>gi|189462552|ref|ZP_03011337.1| hypothetical protein BACCOP_03242 [Bacteroides coprocola DSM 17136]
 gi|189430713|gb|EDU99697.1| hypothetical protein BACCOP_03242 [Bacteroides coprocola DSM 17136]
          Length = 144

 Score =  109 bits (273), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 62/149 (41%), Positives = 82/149 (55%), Gaps = 5/149 (3%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M     +M  AL EAQ AA R E+PVGAV V  ++II+R+ N    L DVTAHAE+ AI 
Sbjct: 1   MADDVFYMKQALIEAQKAADRGEVPVGAVVVCRDRIIARSHNLTETLNDVTAHAEMQAIT 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
                L  + L E  LYVT+EPC MCA AI+ A+  +L +GA + K      G Q Y   
Sbjct: 61  AAANTLGGKYLNECTLYVTVEPCVMCAGAIAWAQTGKLVFGAEDEK-----RGYQRYAPD 115

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             H    +  GI      Q+++ FFK++R
Sbjct: 116 ALHPKTVVVKGILADDCAQLMKGFFKKKR 144


>gi|325697330|gb|EGD39216.1| tRNA-specific adenosine deaminase [Streptococcus sanguinis SK160]
          Length = 165

 Score =  109 bits (273), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 60/149 (40%), Positives = 85/149 (57%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +++   FM  AL+EA+ A   +EIP+G V V   KII R  N   EL+    HAEI+AI 
Sbjct: 15  IEEKEAFMREALKEAEIALAHDEIPIGCVLVKEGKIIGRGHNAREELQRAVMHAEIMAIE 74

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              R  +   L +  L+VT+EPC MC+ AI LARI  + YGA+N K G   +     T  
Sbjct: 75  EANRHENSWRLLDTTLFVTIEPCVMCSGAIGLARIPHVVYGAANQKFGAAGSLYDILTDE 134

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  E+  G+ ++   QI+QDFF++RR
Sbjct: 135 RLNHRVEVETGVLQEECAQIMQDFFRQRR 163


>gi|261208197|ref|ZP_05922870.1| cytidine/deoxycytidylate deaminase [Enterococcus faecium TC 6]
 gi|289566587|ref|ZP_06447008.1| cytidine/deoxycytidylate deaminase [Enterococcus faecium D344SRF]
 gi|294615830|ref|ZP_06695673.1| tRNA-specific adenosine deaminase [Enterococcus faecium E1636]
 gi|260077454|gb|EEW65172.1| cytidine/deoxycytidylate deaminase [Enterococcus faecium TC 6]
 gi|289161632|gb|EFD09511.1| cytidine/deoxycytidylate deaminase [Enterococcus faecium D344SRF]
 gi|291591320|gb|EFF22986.1| tRNA-specific adenosine deaminase [Enterococcus faecium E1636]
          Length = 171

 Score =  109 bits (273), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 53/139 (38%), Positives = 78/139 (56%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  AL EA+ A + +E+P+GAV VL+ K++ R  N     +D T HAE+LAI+  C  +
Sbjct: 14  WMRLALAEAKKAEMLHEVPIGAVVVLDGKVVGRGYNLRETTQDATTHAEMLAIKEACEKV 73

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  L+VTLEPC MC+ A+ L+R+  +Y+GA +PKGG              +H  
Sbjct: 74  GSWRLEDATLFVTLEPCPMCSGAMILSRVAEVYFGAYDPKGGTAGTLMNLLEDERFNHQA 133

Query: 127 EIYPGISEQRSRQIIQDFF 145
            +  GI E     I+ DFF
Sbjct: 134 YVEGGILEDECGMILTDFF 152


>gi|259501366|ref|ZP_05744268.1| tRNA-specific adenosine deaminase [Lactobacillus iners DSM 13335]
 gi|302190913|ref|ZP_07267167.1| hypothetical protein LineA_02730 [Lactobacillus iners AB-1]
 gi|309808233|ref|ZP_07702142.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Lactobacillus iners LactinV 01V1-a]
 gi|312872162|ref|ZP_07732235.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Lactobacillus iners LEAF 2062A-h1]
 gi|312873556|ref|ZP_07733603.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Lactobacillus iners LEAF 2052A-d]
 gi|312875738|ref|ZP_07735733.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Lactobacillus iners LEAF 2053A-b]
 gi|325912947|ref|ZP_08175321.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Lactobacillus iners UPII 60-B]
 gi|259167219|gb|EEW51714.1| tRNA-specific adenosine deaminase [Lactobacillus iners DSM 13335]
 gi|308168521|gb|EFO70630.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Lactobacillus iners LactinV 01V1-a]
 gi|311088730|gb|EFQ47179.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Lactobacillus iners LEAF 2053A-b]
 gi|311090809|gb|EFQ49206.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Lactobacillus iners LEAF 2052A-d]
 gi|311092246|gb|EFQ50617.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Lactobacillus iners LEAF 2062A-h1]
 gi|325477761|gb|EGC80899.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Lactobacillus iners UPII 60-B]
          Length = 158

 Score =  109 bits (273), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 57/143 (39%), Positives = 83/143 (58%), Gaps = 1/143 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  A  EA  A  + EIP+GAV V     +I R  NR    +D T HAEI+AI+  C+ L
Sbjct: 11  MKLAFLEADKAEQQGEIPIGAVIVDAEGNLIGRGYNRRELDEDATRHAEIIAIQEACKNL 70

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
           +   L +  L+VTLEPC MCA AI  AR++ +YYGA +PK G   +    +     +H P
Sbjct: 71  NSWRLIDCSLFVTLEPCPMCAGAIINARLKNVYYGAFDPKAGACGSVVDLFAFTKFNHHP 130

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           +I+ G+  +++ Q +++FFK  R
Sbjct: 131 QIFGGLYREQAAQQLKNFFKNIR 153


>gi|76789589|ref|YP_328675.1| tRNA-specific adenosine deaminase [Chlamydia trachomatis A/HAR-13]
 gi|237803276|ref|YP_002888470.1| Cytosine deaminase [Chlamydia trachomatis B/Jali20/OT]
 gi|237805197|ref|YP_002889351.1| Cytosine deaminase [Chlamydia trachomatis B/TZ1A828/OT]
 gi|76168119|gb|AAX51127.1| tRNA-specific adenosine deaminase [Chlamydia trachomatis A/HAR-13]
 gi|231273497|emb|CAX10413.1| Cytosine deaminase [Chlamydia trachomatis B/TZ1A828/OT]
 gi|231274510|emb|CAX11306.1| Cytosine deaminase [Chlamydia trachomatis B/Jali20/OT]
          Length = 163

 Score =  109 bits (273), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 59/149 (39%), Positives = 85/149 (57%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           ++K   FM  AL+EA+ A  ++E+PVG + V  +KII+R  N   +LKD TAHAE++ I 
Sbjct: 3   IEKDLFFMKKALDEARKAYEQDEVPVGCIIVHGDKIIARGHNSVEQLKDSTAHAEMICIS 62

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
                L    L +  LY TLEPC MCA AI LARI R+ +GA + + G   +    +   
Sbjct: 63  AAAEYLENWRLKDTILYCTLEPCLMCAGAIQLARIPRIVWGAPDLRLGAGGSWLNVFLEK 122

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
              H  E   G+  Q S Q++++FF E+R
Sbjct: 123 HPFHQVECCSGVCYQESEQLMKNFFLEKR 151


>gi|315653116|ref|ZP_07906041.1| tRNA-specific adenosine deaminase [Lactobacillus iners ATCC 55195]
 gi|315489481|gb|EFU79118.1| tRNA-specific adenosine deaminase [Lactobacillus iners ATCC 55195]
          Length = 158

 Score =  109 bits (273), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 57/143 (39%), Positives = 83/143 (58%), Gaps = 1/143 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  A  EA  A  + EIP+GAV V     +I R  NR    +D T HAEI+AI+  C+ L
Sbjct: 11  MKLAFLEADKAEKQGEIPIGAVIVDAEGNLIGRGYNRRELDEDATRHAEIIAIQEACKNL 70

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
           +   L +  L+VTLEPC MCA AI  AR++ +YYGA +PK G   +    +     +H P
Sbjct: 71  NSWRLIDCSLFVTLEPCPMCAGAIINARLKNVYYGAFDPKAGACGSVVDLFAFTKFNHHP 130

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           +I+ G+  +++ Q +++FFK  R
Sbjct: 131 QIFGGLYREQAAQQLKNFFKNIR 153


>gi|260592642|ref|ZP_05858100.1| tRNA-specific adenosine deaminase [Prevotella veroralis F0319]
 gi|260535412|gb|EEX18029.1| tRNA-specific adenosine deaminase [Prevotella veroralis F0319]
          Length = 150

 Score =  109 bits (273), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 60/149 (40%), Positives = 85/149 (57%), Gaps = 5/149 (3%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +KK   FM  A++EA+ A    EIP+GAV V  ++II+RA N    L DVTAHAE+ AI 
Sbjct: 7   IKKDMYFMQRAIDEAKAAYREGEIPIGAVVVCRDRIIARAHNLTETLNDVTAHAEMQAIT 66

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
           +    L  + L +  LYVT+EPC MCA AI  A++ R+ YG  +     I+ G   Y   
Sbjct: 67  IAESELGGKYLQDCTLYVTVEPCIMCAGAIGWAQLHRIVYGCPD-----IKRGYHEYAPK 121

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             H    +  G+ E+  + ++Q FF+ERR
Sbjct: 122 AFHPKANVTSGVLEEECKALMQRFFQERR 150


>gi|300362312|ref|ZP_07058488.1| cytidine/deoxycytidylate deaminase [Lactobacillus gasseri JV-V03]
 gi|300353303|gb|EFJ69175.1| cytidine/deoxycytidylate deaminase [Lactobacillus gasseri JV-V03]
          Length = 160

 Score =  109 bits (273), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 51/144 (35%), Positives = 87/144 (60%), Gaps = 1/144 (0%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNREL-KDVTAHAEILAIRMGCRI 65
           +M  A  +A+ A  + E+P+GA+ V  +  +   G   REL +D T HAE++AIR  C+ 
Sbjct: 10  YMQLAFAQAKKAEDQGEVPIGAIVVDKDGNVIGEGYNRRELDEDATQHAEMIAIREACKN 69

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           L    L +  L++TLEPC MC+ AI  +R+  +YYGA +PK G   +    + +   +H 
Sbjct: 70  LGSWRLVDCSLFITLEPCPMCSGAIINSRLAEVYYGAFDPKAGAAGSVIDLFKVEKFNHH 129

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
           P+++ G+ + ++ Q+++DFF+E R
Sbjct: 130 PQVFGGLFKDQAAQMLKDFFREIR 153


>gi|309806673|ref|ZP_07700669.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Lactobacillus iners LactinV 03V1-b]
 gi|308166978|gb|EFO69161.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Lactobacillus iners LactinV 03V1-b]
          Length = 148

 Score =  109 bits (272), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 57/143 (39%), Positives = 83/143 (58%), Gaps = 1/143 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  A  EA  A  + EIP+GAV V     +I R  NR    +D T HAEI+AI+  C+ L
Sbjct: 1   MKLAFLEADKAEQQGEIPIGAVIVDAEGNLIGRGYNRRELDEDATRHAEIIAIQEACKNL 60

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
           +   L +  L+VTLEPC MCA AI  AR++ +YYGA +PK G   +    +     +H P
Sbjct: 61  NSWRLIDCSLFVTLEPCPMCAGAIINARLKNVYYGAFDPKAGACGSVVDLFAFTKFNHHP 120

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           +I+ G+  +++ Q +++FFK  R
Sbjct: 121 QIFGGLYREQAAQQLKNFFKNIR 143


>gi|302390826|ref|YP_003826646.1| tRNA-adenosine deaminase [Acetohalobium arabaticum DSM 5501]
 gi|302202903|gb|ADL11581.1| tRNA-adenosine deaminase [Acetohalobium arabaticum DSM 5501]
          Length = 155

 Score =  109 bits (272), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 55/143 (38%), Positives = 81/143 (56%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  AL EAQ A  + E+P+GAV V  +++I+R+ N   +L D TAHAEILAI+     L
Sbjct: 8   YMKLALAEAQKAYDKAEVPIGAVVVKGDEVIARSHNLREKLADPTAHAEILAIKEAANTL 67

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L    +YVT+EPC MCA A+  AR+ RL YG ++ K G   +       +  +H  
Sbjct: 68  GDWRLYNCTIYVTVEPCVMCAGALVQARVERLVYGTADLKAGAAGSILDLVQFSDFNHQL 127

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+   I E   + I++ FF++ R
Sbjct: 128 EVKSAILEDECKDIMESFFQDLR 150


>gi|85712706|ref|ZP_01043751.1| Cytosine/adenosine deaminase putative [Idiomarina baltica OS145]
 gi|85693438|gb|EAQ31391.1| Cytosine/adenosine deaminase putative [Idiomarina baltica OS145]
          Length = 179

 Score =  109 bits (272), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 57/149 (38%), Positives = 83/149 (55%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M    ++M  ALE A  AA  +E+PVGAV VLN+ I+    N+   L D +AHAE  AIR
Sbjct: 15  MTTDEIYMQRALELAHKAADEDEVPVGAVLVLNDMIVGEGYNQVITLSDPSAHAEAQAIR 74

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              + +    L +  LYVTLEPC MCA  I+ AR++RL +GA +P+ G      +     
Sbjct: 75  AAGKNVDNYRLTDSTLYVTLEPCAMCAGLITHARVKRLVFGAPDPRTGATGTAIEVLNHV 134

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
           + +H  E+  G+  +    I++ FF+ RR
Sbjct: 135 SMNHRVEVTSGVLAEPCGDILRQFFRARR 163


>gi|261855229|ref|YP_003262512.1| CMP/dCMP deaminase zinc-binding protein [Halothiobacillus
           neapolitanus c2]
 gi|261835698|gb|ACX95465.1| CMP/dCMP deaminase zinc-binding protein [Halothiobacillus
           neapolitanus c2]
          Length = 153

 Score =  109 bits (272), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 60/143 (41%), Positives = 81/143 (56%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           F+  AL+EA  AA   E+PVGAV V   K+I+   N    L D +AHAEILA+R     L
Sbjct: 11  FIQQALDEANLAAADGEVPVGAVVVRQGKVIATGRNAPIRLNDPSAHAEILALRAAGMAL 70

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
           +   L +  LYVTLEPC MC AAIS ARI R+ + A +P+ G              HHS 
Sbjct: 71  ANYRLDDCTLYVTLEPCPMCMAAISHARIARVVFAAPDPRAGACGGAIDLNRAPWHHHSV 130

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
            +  G  EQ + ++++ FF+E+R
Sbjct: 131 VVDTGPCEQEAAELLRHFFQEKR 153


>gi|118595115|ref|ZP_01552462.1| Cytidine/deoxycytidylate deaminase, zinc-binding region
           [Methylophilales bacterium HTCC2181]
 gi|118440893|gb|EAV47520.1| Cytidine/deoxycytidylate deaminase, zinc-binding region
           [Methylophilales bacterium HTCC2181]
          Length = 149

 Score =  109 bits (272), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 61/142 (42%), Positives = 81/142 (57%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  AL  A+ A   +E+PVGAV V +N II R  N   +  D T HAE+ AIR   R + 
Sbjct: 1   MQEALAMAKIAYANHEVPVGAVIVNDNIIIGRGCNELIQKNDPTGHAEMHAIREAARTIK 60

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
              L   D+YVTLEPC MC  AI  +RI+ L++GA + K G  E+     +  T +H   
Sbjct: 61  NYRLTNCDIYVTLEPCPMCIGAIFNSRIKNLFFGAYDHKTGVCESVVNLGSFKTLNHHCN 120

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
           I+ GI E  S+ I+Q FF+ERR
Sbjct: 121 IFGGILENESKNILQKFFRERR 142


>gi|166154188|ref|YP_001654306.1| cytosine deaminase [Chlamydia trachomatis 434/Bu]
 gi|166155063|ref|YP_001653318.1| cytosine deaminase [Chlamydia trachomatis L2b/UCH-1/proctitis]
 gi|255311685|ref|ZP_05354255.1| cytosine deaminase [Chlamydia trachomatis 6276]
 gi|255317986|ref|ZP_05359232.1| cytosine deaminase [Chlamydia trachomatis 6276s]
 gi|255349249|ref|ZP_05381256.1| cytosine deaminase [Chlamydia trachomatis 70]
 gi|255503786|ref|ZP_05382176.1| cytosine deaminase [Chlamydia trachomatis 70s]
 gi|255507467|ref|ZP_05383106.1| cytosine deaminase [Chlamydia trachomatis D(s)2923]
 gi|301335433|ref|ZP_07223677.1| cytosine deaminase [Chlamydia trachomatis L2tet1]
 gi|165930176|emb|CAP03660.1| Cytosine deaminase [Chlamydia trachomatis 434/Bu]
 gi|165931051|emb|CAP06614.1| Cytosine deaminase [Chlamydia trachomatis L2b/UCH-1/proctitis]
 gi|289525890|emb|CBJ15372.1| Cytosine deaminase [Chlamydia trachomatis Sweden2]
 gi|296435476|gb|ADH17654.1| cytosine deaminase [Chlamydia trachomatis E/150]
 gi|296437331|gb|ADH19501.1| cytosine deaminase [Chlamydia trachomatis G/11222]
 gi|296439193|gb|ADH21346.1| cytosine deaminase [Chlamydia trachomatis E/11023]
          Length = 163

 Score =  109 bits (272), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 59/149 (39%), Positives = 85/149 (57%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           ++K   FM  AL+EA+ A  ++E+PVG + V  +KII+R  N   +LKD TAHAE++ I 
Sbjct: 3   IEKDLFFMKKALDEARKAYEQDEVPVGCIIVHGDKIIARGHNSVEQLKDPTAHAEMICIS 62

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
                L    L +  LY TLEPC MCA AI LARI R+ +GA + + G   +    +   
Sbjct: 63  AAAEYLENWRLKDTILYCTLEPCLMCAGAIQLARIPRIVWGAPDLRLGAGGSWLNVFLEK 122

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
              H  E   G+  Q S Q++++FF E+R
Sbjct: 123 HPFHQVECCSGVCYQESEQLMKNFFLEKR 151


>gi|86607357|ref|YP_476120.1| cytidine/deoxycytidylate deaminase zinc-binding domain-containing
           protein [Synechococcus sp. JA-3-3Ab]
 gi|86555899|gb|ABD00857.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein
           [Synechococcus sp. JA-3-3Ab]
          Length = 174

 Score =  109 bits (272), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 57/150 (38%), Positives = 85/150 (56%), Gaps = 1/150 (0%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAI 59
            ++   +M  AL+EA+ A    E+PV A+ V    ++++ + NR    +D TAHAEILA+
Sbjct: 19  WQRHRAWMQLALQEAERAGEAGEVPVAALVVGPGEELLALSSNRRERDRDPTAHAEILAL 78

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
           R   + L    L    LYVTLEPC MCA AIS +R+ ++ YGA +PK G + +       
Sbjct: 79  RQAGQRLGDWQLQGCRLYVTLEPCPMCAGAISQSRLAQVIYGADDPKAGALRSVLNLPAS 138

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
           A   H PE+  G+ E   R+++Q +F  RR
Sbjct: 139 AASFHCPEVIGGVCEAECRRLLQQWFSRRR 168


>gi|312279157|gb|ADQ63814.1| Cytidine/deoxycytidylate deaminase family protein, putative
           [Streptococcus thermophilus ND03]
          Length = 172

 Score =  109 bits (272), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 57/144 (39%), Positives = 83/144 (57%)

Query: 6   VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           +FMS AL+EAQ +  + EIP+G V V + +I+ R  N   EL     HAE++AI+   R 
Sbjct: 11  IFMSEALKEAQKSLDKAEIPIGCVIVKDKEIVGRGHNAREELNQAIMHAEVMAIQEANRT 70

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           +    L +  L+VT+EPC MC+ AI LARI ++ YGA N K GG  +          +H 
Sbjct: 71  VGNWRLLDCTLFVTIEPCVMCSGAIGLARIPKVIYGACNQKFGGAGSLYDILRDERLNHR 130

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
            E+  G+ E    +I+QDFF++ R
Sbjct: 131 VEVETGVMEADCAKIMQDFFRQSR 154


>gi|116629038|ref|YP_814210.1| cytosine/adenosine deaminase [Lactobacillus gasseri ATCC 33323]
 gi|238853616|ref|ZP_04643985.1| tRNA-specific adenosine deaminase [Lactobacillus gasseri 202-4]
 gi|311111167|ref|ZP_07712564.1| cytidine/deoxycytidylate deaminase family protein [Lactobacillus
           gasseri MV-22]
 gi|116094620|gb|ABJ59772.1| tRNA-adenosine deaminase [Lactobacillus gasseri ATCC 33323]
 gi|238833760|gb|EEQ26028.1| tRNA-specific adenosine deaminase [Lactobacillus gasseri 202-4]
 gi|311066321|gb|EFQ46661.1| cytidine/deoxycytidylate deaminase family protein [Lactobacillus
           gasseri MV-22]
          Length = 160

 Score =  109 bits (272), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 51/144 (35%), Positives = 87/144 (60%), Gaps = 1/144 (0%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNREL-KDVTAHAEILAIRMGCRI 65
           +M  A  +A+ A  + E+P+GA+ V  +  +   G   REL +D T HAE++AIR  C+ 
Sbjct: 10  YMQLAFAQAKKAEDQGEVPIGAIVVDKDGNVIGEGYNRRELDEDATQHAEMIAIRQACQN 69

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           L    L +  L++TLEPC MC+ AI  +R+  +YYGA +PK G   +    + +   +H 
Sbjct: 70  LGSWRLVDCSLFITLEPCPMCSGAIINSRLAEVYYGAFDPKAGAAGSVIDLFKVEKFNHH 129

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
           P+++ G+ + ++ Q+++DFF+E R
Sbjct: 130 PKVFGGLFKDQAAQMLKDFFREIR 153


>gi|329121024|ref|ZP_08249655.1| tRNA-specific adenosine deaminase [Dialister micraerophilus DSM
           19965]
 gi|327471186|gb|EGF16640.1| tRNA-specific adenosine deaminase [Dialister micraerophilus DSM
           19965]
          Length = 149

 Score =  109 bits (272), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 54/142 (38%), Positives = 87/142 (61%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M+ A++EA+ A + NE+P+GA+    + II+ + N   + K++  HAEILAI+   ++L
Sbjct: 6   YMTLAIQEAKKAYMNNEMPIGAIITYKDIIIANSYNECEKNKNIFDHAEILAIKKASKLL 65

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
           +   L    LYVT+EPC MCA AI  +RI RL +GA N   GGI +  +    ++ +H+ 
Sbjct: 66  NTSRLTGCTLYVTIEPCPMCAGAIMHSRIDRLVFGAFNDLYGGIISKYKIGKDSSMNHTL 125

Query: 127 EIYPGISEQRSRQIIQDFFKER 148
            +  GI E   +Q++ DFFK +
Sbjct: 126 SVVSGIEENTCKQLVCDFFKNK 147


>gi|312870914|ref|ZP_07731019.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Lactobacillus iners LEAF 3008A-a]
 gi|311093604|gb|EFQ51943.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Lactobacillus iners LEAF 3008A-a]
          Length = 158

 Score =  109 bits (272), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 57/143 (39%), Positives = 83/143 (58%), Gaps = 1/143 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  A  EA  A  + EIP+GAV V     +I R  NR    +D T HAEI+AI+  C+ L
Sbjct: 11  MKLAFLEADKAEQQGEIPIGAVIVDAEGNLIGRGYNRRELDEDATRHAEIIAIQEACKNL 70

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
           +   L +  L+VTLEPC MCA AI  AR++ +YYGA +PK G   +    +     +H P
Sbjct: 71  NSWRLIDCSLFVTLEPCPMCAGAIINARLKNVYYGAFDPKAGACGSVVDLFAFTKFNHHP 130

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           +I+ G+  +++ Q +++FFK  R
Sbjct: 131 QIFGGLYREQAAQQLKNFFKNIR 153


>gi|312862370|ref|ZP_07722613.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Streptococcus vestibularis F0396]
 gi|311102013|gb|EFQ60213.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Streptococcus vestibularis F0396]
          Length = 172

 Score =  109 bits (272), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 57/143 (39%), Positives = 83/143 (58%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FMS AL+EAQ +  + EIP+G V V + +I+ R  N   EL     HAE++AI+   R +
Sbjct: 12  FMSEALKEAQKSLDKAEIPIGCVIVKDREIVGRGHNAREELNQAIMHAEVMAIQEANRTV 71

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  L+VT+EPC MC+ AI LARI ++ YGA N K GG  +          +H  
Sbjct: 72  GNWRLLDCTLFVTIEPCVMCSGAIGLARIPKVIYGACNQKFGGAGSLYDILRDERLNHRV 131

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+  G+ E+   +I+QDFF++ R
Sbjct: 132 EVETGVMEEECAKIMQDFFRQSR 154


>gi|258649234|ref|ZP_05736703.1| tRNA-specific adenosine deaminase [Prevotella tannerae ATCC 51259]
 gi|260850414|gb|EEX70283.1| tRNA-specific adenosine deaminase [Prevotella tannerae ATCC 51259]
          Length = 143

 Score =  109 bits (272), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 58/143 (40%), Positives = 82/143 (57%), Gaps = 5/143 (3%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  AL EA+ A    E+PVGAV V  ++II+RA N    L DVTAHAE+ AI      L
Sbjct: 6   YMQKALIEAKQAFEEGEVPVGAVIVCRDRIIARAHNLTERLTDVTAHAEMQAITAAANAL 65

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
             + L +  LYVT+EPC MCA A++ A++ R+ YGAS+PK      G   +     H   
Sbjct: 66  GGKYLTDCTLYVTVEPCVMCAGALAWAQLSRIVYGASDPK-----RGFSVFAPNALHPRT 120

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+  G+  +    +++DFF+ RR
Sbjct: 121 EVTEGVLAEECANLMKDFFQRRR 143


>gi|15834852|ref|NP_296611.1| cytidine/deoxycytidylate deaminase family protein [Chlamydia
           muridarum Nigg]
 gi|301336416|ref|ZP_07224618.1| cytidine/deoxycytidylate deaminase family protein [Chlamydia
           muridarum MopnTet14]
 gi|8163170|gb|AAF73539.1| cytidine/deoxycytidylate deaminase family protein [Chlamydia
           muridarum Nigg]
          Length = 157

 Score =  109 bits (272), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 59/149 (39%), Positives = 82/149 (55%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           ++K   FM  AL+EA+ A   +E+PVG + V  + II+R  N    LKD TAHAE++ I 
Sbjct: 3   IEKDLFFMKKALDEARKAYELDEVPVGCIIVQGDAIIARGHNSVERLKDPTAHAEMICIS 62

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
                L    L +  LY TLEPC MCA AI LARI R+ +GA + + G   +    +   
Sbjct: 63  AAAEYLQNWRLKDTTLYCTLEPCLMCAGAIQLARIPRIVWGAPDLRLGAGGSWLNVFLEK 122

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
              H  E  PGI  Q S  ++++FF E+R
Sbjct: 123 HPFHQVECCPGICHQESEWLMKNFFWEKR 151


>gi|89094120|ref|ZP_01167063.1| hypothetical protein MED92_16295 [Oceanospirillum sp. MED92]
 gi|89081595|gb|EAR60824.1| hypothetical protein MED92_16295 [Oceanospirillum sp. MED92]
          Length = 168

 Score =  109 bits (272), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 55/143 (38%), Positives = 84/143 (58%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  ALE A  A   NE+PVGA+ VL+ +++    N      D TAHAE++A+R   + +
Sbjct: 10  WMERALELADRAEQLNEVPVGALVVLDGEVVGEGWNHPISGNDPTAHAEMMALRAAAQKV 69

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L   +L+VT+EPCTMC+ AI  ARI+R+ YGA+  K G +++  Q ++    +H  
Sbjct: 70  GNYRLVGAELFVTIEPCTMCSGAIVHARIKRVIYGATEAKSGAVDSNCQLFSQPWINHDV 129

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           EI  G+  +R  + I  FF+ RR
Sbjct: 130 EITRGVLAERCSKKISAFFQRRR 152


>gi|257876509|ref|ZP_05656162.1| cytidine/deoxycytidylate deaminase [Enterococcus casseliflavus
           EC20]
 gi|257810675|gb|EEV39495.1| cytidine/deoxycytidylate deaminase [Enterococcus casseliflavus
           EC20]
          Length = 168

 Score =  109 bits (272), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 56/143 (39%), Positives = 79/143 (55%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  A++EA+ A    E+P+GAV VL+ KII R  N     +   AHAE+ AI   CR +
Sbjct: 15  FMEEAIKEARKAEGLAEVPIGAVVVLDGKIIGRGHNLRETQQQAAAHAEMFAIEEACRTV 74

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  L+VTLEPC MC+ A+ LAR+  +Y+GA +PKGG              +H  
Sbjct: 75  GSWRLEQAQLFVTLEPCPMCSGAMLLARVEEVYFGAYDPKGGTAGTLMNLLEDERFNHWS 134

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
            +  GI E+   Q++ DFF+  R
Sbjct: 135 YVEGGILEEACGQLLTDFFRALR 157


>gi|313887628|ref|ZP_07821310.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Peptoniphilus harei ACS-146-V-Sch2b]
 gi|312846237|gb|EFR33616.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Peptoniphilus harei ACS-146-V-Sch2b]
          Length = 150

 Score =  109 bits (272), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 61/143 (42%), Positives = 82/143 (57%), Gaps = 1/143 (0%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  AL   + + L +++P+G V V NNKII    N+  +LK+ TAHAEI+AI M  R L
Sbjct: 5   FMKEALRYGRRSLLSDDVPIGCVVVKNNKIIGYGYNKKEDLKNPTAHAEIMAISMAARHL 64

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
           +   L   D+YVTLEPC MC  AI  ARI+ LY+GA N + G + +  +   L T H   
Sbjct: 65  NSYHLEGCDIYVTLEPCLMCVGAILNARIKNLYFGARNKRFGAVVSHQKIEKLITNHRIN 124

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
             Y GI E+    +I  FF + R
Sbjct: 125 YEY-GILERECASLITGFFSDLR 146


>gi|299820898|ref|ZP_07052787.1| tRNA-specific adenosine deaminase [Listeria grayi DSM 20601]
 gi|299817919|gb|EFI85154.1| tRNA-specific adenosine deaminase [Listeria grayi DSM 20601]
          Length = 173

 Score =  109 bits (272), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 53/141 (37%), Positives = 83/141 (58%)

Query: 6   VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           +FM  A++EA+ A    E+P+GAV VL+N+II R  N     ++   HAEILAI+  C+ 
Sbjct: 18  IFMEEAIKEARKAQALGEVPIGAVVVLDNEIIGRGHNLRETTQNAITHAEILAIQAACQN 77

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
                L E ++YVTLEPC MC+ AI L+R++++YYGA +PK G              +H+
Sbjct: 78  RESWRLSEAEIYVTLEPCPMCSGAILLSRLKKVYYGAPDPKAGTAGTLMNLLQDDRFNHT 137

Query: 126 PEIYPGISEQRSRQIIQDFFK 146
            E+  G+ +    +++  FF+
Sbjct: 138 CEVEAGLLQTECAELLTSFFR 158


>gi|86608124|ref|YP_476886.1| cytidine and deoxycytidylate deaminase family protein
           [Synechococcus sp. JA-2-3B'a(2-13)]
 gi|86556666|gb|ABD01623.1| cytidine and deoxycytidylate deaminase family protein
           [Synechococcus sp. JA-2-3B'a(2-13)]
          Length = 171

 Score =  109 bits (272), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 58/150 (38%), Positives = 84/150 (56%), Gaps = 1/150 (0%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAI 59
            ++   +M  AL EA+ A    E+PV A+ V    K+++ + NR    +D TAHAEILA+
Sbjct: 13  WQRHRAWMQLALREAEQAGEAGEVPVAALVVGPGEKLLALSSNRRERDRDPTAHAEILAL 72

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
           R   + L    L    LYVTLEPC MCA AIS +R+ ++ YGA +PK G + +       
Sbjct: 73  RQAGQRLGDWQLQGCRLYVTLEPCPMCAGAISQSRLAQVIYGADDPKAGALRSVLNLPAS 132

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
           A   H PE+  G+ E   R+++Q +F  RR
Sbjct: 133 AASFHCPEVIGGVCEAECRRLLQQWFCRRR 162


>gi|293552936|ref|ZP_06673591.1| tRNA-specific adenosine deaminase [Enterococcus faecium E1039]
 gi|291602912|gb|EFF33109.1| tRNA-specific adenosine deaminase [Enterococcus faecium E1039]
          Length = 171

 Score =  109 bits (272), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 53/139 (38%), Positives = 78/139 (56%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  AL EA+ A + +E+P+GAV VL+ K++ R  N     +D T HAE+LAI+  C  +
Sbjct: 14  WMRLALAEAKKAEMLHEVPIGAVVVLDGKVVGRGYNLRETTQDATTHAEMLAIKEACEKV 73

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  L+VTLEPC MC+ A+ L+R+  +Y+GA +PKGG              +H  
Sbjct: 74  GSWRLEDAALFVTLEPCPMCSGAMILSRVAEVYFGAYDPKGGTAGTLMNLLEDERFNHQA 133

Query: 127 EIYPGISEQRSRQIIQDFF 145
            +  GI E     I+ DFF
Sbjct: 134 YVEGGILEDECGMILTDFF 152


>gi|329957514|ref|ZP_08297989.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Bacteroides clarus YIT 12056]
 gi|328522391|gb|EGF49500.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Bacteroides clarus YIT 12056]
          Length = 144

 Score =  109 bits (272), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 60/143 (41%), Positives = 78/143 (54%), Gaps = 5/143 (3%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  AL EAQ A  R E+PVGAV V  ++II+RA N    L DVTAHAE+ AI      L
Sbjct: 6   YMKQALLEAQKAGERGEVPVGAVVVCKDRIIARAHNLTETLTDVTAHAEMQAITAAAATL 65

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
             + L E  LYVT+EPC MCA AI+ A+  RL +GA + K      G Q Y     H   
Sbjct: 66  GGKYLNECTLYVTVEPCVMCAGAIAWAQTGRLVFGAEDEK-----RGYQRYAPQALHPKT 120

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
            +  G+       +++DFF  +R
Sbjct: 121 SVVKGVLADECAALMKDFFAAKR 143


>gi|191639204|ref|YP_001988370.1| Putative Cytidine/deoxycytidylate deaminase, zinc-binding region
           YaaJ [Lactobacillus casei BL23]
 gi|227533725|ref|ZP_03963774.1| zinc-binding cytidine/deoxycytidylate deaminase [Lactobacillus
           paracasei subsp. paracasei ATCC 25302]
 gi|190713506|emb|CAQ67512.1| Putative Cytidine/deoxycytidylate deaminase, zinc-binding region
           YaaJ [Lactobacillus casei BL23]
 gi|227188709|gb|EEI68776.1| zinc-binding cytidine/deoxycytidylate deaminase [Lactobacillus
           paracasei subsp. paracasei ATCC 25302]
 gi|327383282|gb|AEA54758.1| Nucleoside deaminase [Lactobacillus casei LC2W]
 gi|327386465|gb|AEA57939.1| Nucleoside deaminase [Lactobacillus casei BD-II]
          Length = 168

 Score =  109 bits (272), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 60/144 (41%), Positives = 81/144 (56%), Gaps = 4/144 (2%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           N FM  AL EA+ AA   E+P+GAV V   +II R  N     +D T HAE+LAI+  C+
Sbjct: 7   NQFMDAALTEAKKAAAIGEVPIGAVIVHQGEIIGRGYNLRETTQDATHHAEMLAIQAACK 66

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC-- 122
            L    L +  L+VTLEPC MCA A+  AR+   Y+GA++PK G    GT +  LA    
Sbjct: 67  TLGTWRLEDCSLFVTLEPCPMCAGAMINARVATCYFGATDPKAG--VAGTFYNLLADTRF 124

Query: 123 HHSPEIYPGISEQRSRQIIQDFFK 146
           +H   +  GI    S  ++Q FF+
Sbjct: 125 NHQVAVVSGIKADESATLLQTFFR 148


>gi|158319077|ref|YP_001511584.1| CMP/dCMP deaminase zinc-binding [Alkaliphilus oremlandii OhILAs]
 gi|158139276|gb|ABW17588.1| CMP/dCMP deaminase zinc-binding [Alkaliphilus oremlandii OhILAs]
          Length = 154

 Score =  109 bits (272), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 56/143 (39%), Positives = 84/143 (58%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  A+EEA+ A  + E+P+GAV V +N+II R  N     K+  +HAEI+AI+  C+ L
Sbjct: 7   FMLEAIEEAKKAFNKKEVPIGAVVVKDNEIIGRGHNLRETTKNSISHAEIMAIQEACKFL 66

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  LYVT+EPC MCA AI  +RI+++  GA +PK G   +       +  +H  
Sbjct: 67  GGWRLTDCTLYVTIEPCPMCAGAILQSRIQKVVIGAMDPKAGACGSLVNLLNDSRFNHQT 126

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           EI  G+ E+    ++++FFK  R
Sbjct: 127 EIEQGVLEEECSLLMKEFFKALR 149


>gi|239637751|ref|ZP_04678718.1| tRNA-specific adenosine deaminase [Staphylococcus warneri L37603]
 gi|239596653|gb|EEQ79183.1| tRNA-specific adenosine deaminase [Staphylococcus warneri L37603]
          Length = 168

 Score =  109 bits (272), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 54/149 (36%), Positives = 87/149 (58%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M+    +M  A++EA+ A L  E+P+GA+ V N  +I+RA N    ++  TAHAE LAI 
Sbjct: 1   METDEYYMKLAIQEAKKAELLGEVPIGAIIVKNGHVIARAHNLRETMQQPTAHAEHLAIE 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              ++L    L +  LYVTLEPC MCA  I ++RI  + YGA++PKGG   +        
Sbjct: 61  RAAKVLGSWRLEDCTLYVTLEPCVMCAGTIVMSRIPYIKYGAADPKGGCSGSLMNLLNQP 120

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  ++  G+ E++   ++++FF++ R
Sbjct: 121 DFNHRAQVESGLLEEQCGDLLRNFFRKLR 149


>gi|218258211|ref|ZP_03474613.1| hypothetical protein PRABACTJOHN_00267 [Parabacteroides johnsonii
           DSM 18315]
 gi|218225660|gb|EEC98310.1| hypothetical protein PRABACTJOHN_00267 [Parabacteroides johnsonii
           DSM 18315]
          Length = 147

 Score =  109 bits (272), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 59/143 (41%), Positives = 83/143 (58%), Gaps = 5/143 (3%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  AL EA+ AA   E+PVGAV V NN+II+RA N+   L D TAHAE+LAI     +L
Sbjct: 10  FMKQALIEARAAAKEGEVPVGAVIVCNNRIIARAHNQTERLNDPTAHAEMLAITAAVGVL 69

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
             + L    LYVT+EPC MCA AI  +++ ++ YGA++ K      G Q Y     H   
Sbjct: 70  GAKYLTGCSLYVTVEPCVMCAGAIGWSQLSKIVYGATDEK-----RGFQQYAPKALHPKS 124

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
            +  G+ E    + +++FF+ +R
Sbjct: 125 TVKKGVLENECAEEMRNFFQRKR 147


>gi|121604898|ref|YP_982227.1| CMP/dCMP deaminase [Polaromonas naphthalenivorans CJ2]
 gi|120593867|gb|ABM37306.1| CMP/dCMP deaminase, zinc-binding protein [Polaromonas
           naphthalenivorans CJ2]
          Length = 411

 Score =  109 bits (272), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 61/144 (42%), Positives = 86/144 (59%)

Query: 6   VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
            FM  AL +A+ AA   E+PVGAV V   K+I+   N   E  D TAHAEI+A+R     
Sbjct: 5   AFMEMALVQARVAAAFGEVPVGAVVVRQGKVIATGRNAPVEAHDPTAHAEIMALRAAALA 64

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           L    L E +L+VTLEPC MC+ A+  AR++R+ +GAS PK G   +    +  A  +H 
Sbjct: 65  LGNYRLDECELFVTLEPCAMCSGAMLNARLKRVVFGASEPKTGAAGSVINLFAQARLNHQ 124

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
            E+  G+  + SR ++QDFF++RR
Sbjct: 125 TELQGGVLAESSRALLQDFFRQRR 148


>gi|325566945|ref|ZP_08143723.1| tRNA-specific adenosine deaminase [Enterococcus casseliflavus ATCC
           12755]
 gi|325159117|gb|EGC71262.1| tRNA-specific adenosine deaminase [Enterococcus casseliflavus ATCC
           12755]
          Length = 168

 Score =  109 bits (272), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 56/143 (39%), Positives = 79/143 (55%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  A++EA+ A    E+P+GAV VL+ KII R  N     +   AHAE+ AI   CR +
Sbjct: 15  FMEEAIKEARKAEGVAEVPIGAVVVLDGKIIGRGHNLRETQQQAAAHAEMFAIEEACRTV 74

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  L+VTLEPC MC+ A+ LAR+  +Y+GA +PKGG              +H  
Sbjct: 75  GSWRLEQAQLFVTLEPCPMCSGAMLLARVEEVYFGAYDPKGGTAGTLMNLLEDERFNHWS 134

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
            +  GI E+   Q++ DFF+  R
Sbjct: 135 YVEGGILEEACGQLLTDFFRALR 157


>gi|300774752|ref|ZP_07084615.1| cytosine deaminase [Chryseobacterium gleum ATCC 35910]
 gi|300506567|gb|EFK37702.1| cytosine deaminase [Chryseobacterium gleum ATCC 35910]
          Length = 143

 Score =  109 bits (272), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 56/143 (39%), Positives = 81/143 (56%), Gaps = 6/143 (4%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  AL+EA+ A  ++E+P+G V V NN+II+RA N    L DVTAHAE+ AI      L
Sbjct: 7   YMKMALQEAEAALEKDEVPIGCVVVSNNRIIARAHNLTETLNDVTAHAEMQAITSAANFL 66

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
             + L +  LYVT+EPC MC+ A+S ++I ++  GA + + G I            H   
Sbjct: 67  GGKYLKDCTLYVTMEPCVMCSGALSWSQISKVVIGARDEQRGFINKHLSL------HPKT 120

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+  GI E     I++ FFK +R
Sbjct: 121 EVITGIMEAECSSIVKQFFKSKR 143


>gi|261364637|ref|ZP_05977520.1| tRNA-specific adenosine deaminase [Neisseria mucosa ATCC 25996]
 gi|288567233|gb|EFC88793.1| tRNA-specific adenosine deaminase [Neisseria mucosa ATCC 25996]
          Length = 243

 Score =  109 bits (272), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 60/143 (41%), Positives = 82/143 (57%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  AL +A+ +A   EIPVGAV V +N+II+ A N      D++ HAEI A+ +    L
Sbjct: 98  FMRAALVQAEQSARIGEIPVGAVVVADNQIIAAAHNTCVSDHDISRHAEIRALAVAGAAL 157

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L E DLY+TLEPC MCA+AI  AR+RR+ YGA+ PK G   +    +     +   
Sbjct: 158 QNYRLDECDLYITLEPCAMCASAIIQARVRRVIYGAAEPKTGAAGSVVNLFANPLLNKHT 217

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
            I  GI E   + ++Q FF+ RR
Sbjct: 218 AIKGGILEDECKDVLQAFFQTRR 240


>gi|237745836|ref|ZP_04576316.1| tRNA-specific adenosine deaminase [Oxalobacter formigenes HOxBLS]
 gi|229377187|gb|EEO27278.1| tRNA-specific adenosine deaminase [Oxalobacter formigenes HOxBLS]
          Length = 150

 Score =  109 bits (272), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 56/145 (38%), Positives = 83/145 (57%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           +VFM  AL++A  A    E+PVGAV VL  ++I+   N      D TAHAEI+A+R   +
Sbjct: 4   DVFMRAALDQAALAKEAGEVPVGAVVVLEGRVIASGFNCPISRHDPTAHAEIMALRNAAK 63

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
           I     LP  +LYVTLEPC+MCA A+  AR++R+ +GA +PK G   +    +     +H
Sbjct: 64  ICGNYRLPACELYVTLEPCSMCAGAMIHARLKRVVFGAFDPKTGACGSVVDLFGQKELNH 123

Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149
              +  G+ +     +++ FF ERR
Sbjct: 124 HTTVTSGVLQDECSLLLKMFFAERR 148


>gi|55823732|ref|YP_142173.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus
           thermophilus CNRZ1066]
 gi|55739717|gb|AAV63358.1| cytidine/deoxycytidylate deaminase family protein, putative
           [Streptococcus thermophilus CNRZ1066]
          Length = 172

 Score =  109 bits (272), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 58/144 (40%), Positives = 83/144 (57%)

Query: 6   VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           +FMS AL+EAQ +  + EIP+G V V + +I+ R  N   EL     HAE++AI+   R 
Sbjct: 11  IFMSEALKEAQKSLDKAEIPIGCVIVKDREIVGRGHNAREELNQAIMHAEVMAIQEANRT 70

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           +    L +  L+VT+EPC MC+ AI LARI ++ YGA N K GG  +          +H 
Sbjct: 71  VGNWRLLDCTLFVTIEPCVMCSGAIGLARIPKVIYGACNQKFGGAGSLYDILRDERLNHR 130

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
            E+  GI E    +I+QDFF++ R
Sbjct: 131 VEVETGIMEVDCAKIMQDFFRQSR 154


>gi|118444046|ref|YP_879269.1| cytidine/deoxycytidylate deaminase family protein, pytative
           [Clostridium novyi NT]
 gi|118134502|gb|ABK61546.1| cytidine/deoxycytidylate deaminase family protein, pytative
           [Clostridium novyi NT]
          Length = 147

 Score =  108 bits (271), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 62/146 (42%), Positives = 85/146 (58%), Gaps = 7/146 (4%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  AL+EA+ AAL++E+PVGAV V N ++I+ A N    L D TAHAEILAI+    IL
Sbjct: 5   FMEIALDEAKIAALKDEVPVGAVIVKNGEVIASAHNLRETLNDPTAHAEILAIKKASSIL 64

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPK---GGGIENGTQFYTLATCH 123
               L E ++YVTLEPC MC+ AI  +RIR+LY G  +P     G + +  Q   L T  
Sbjct: 65  KNWRLNECEMYVTLEPCPMCSGAILQSRIRKLYIGTIDPSMGCCGSVVDLVQNRYLKTAL 124

Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149
                    ++ R   I+ +FF+ +R
Sbjct: 125 D----IKWFNDDRCSSILTNFFRSKR 146


>gi|116495716|ref|YP_807450.1| cytosine/adenosine deaminase [Lactobacillus casei ATCC 334]
 gi|116105866|gb|ABJ71008.1| tRNA-adenosine deaminase [Lactobacillus casei ATCC 334]
          Length = 168

 Score =  108 bits (271), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 60/144 (41%), Positives = 81/144 (56%), Gaps = 4/144 (2%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           N FM  AL EA+ AA   E+P+GAV V   +II R  N     +D T HAE+LAI+  C+
Sbjct: 7   NQFMDAALTEAKKAAAIGEVPIGAVIVHQGEIIGRGYNLRETTQDATYHAEMLAIQAACK 66

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC-- 122
            L    L +  L+VTLEPC MCA A+  AR+   Y+GA++PK G    GT +  LA    
Sbjct: 67  TLGTWRLEDCSLFVTLEPCPMCAGAMINARVATCYFGATDPKAG--VAGTFYNLLADTRF 124

Query: 123 HHSPEIYPGISEQRSRQIIQDFFK 146
           +H   +  GI    S  ++Q FF+
Sbjct: 125 NHQVAVVSGIKADESATLLQTFFR 148


>gi|119356459|ref|YP_911103.1| tRNA-adenosine deaminase [Chlorobium phaeobacteroides DSM 266]
 gi|119353808|gb|ABL64679.1| tRNA-adenosine deaminase [Chlorobium phaeobacteroides DSM 266]
          Length = 153

 Score =  108 bits (271), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 56/144 (38%), Positives = 85/144 (59%), Gaps = 1/144 (0%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNN-KIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           +M+ A +EA  A  + E+PVGAV   +N  I+ +  N+  EL D TAHAE++A+      
Sbjct: 6   YMAIAFKEALKAVEKKEVPVGAVVFDSNGNIVGKGYNQVEELSDATAHAEMIALTSAMAT 65

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           L+ + L +  + VT+EPC MCA A+  A+I RL +GA +PK G              +H+
Sbjct: 66  LNTKYLDDCTIAVTMEPCPMCAGALVNAKIGRLIFGAYDPKMGAAGTVLNITGCRELNHN 125

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
           PE++ GI EQ+   ++QDFF+E R
Sbjct: 126 PEVFGGIMEQQCSGLLQDFFRELR 149


>gi|260061052|ref|YP_003194132.1| putative cytosine/adenosine deaminase [Robiginitalea biformata
           HTCC2501]
 gi|88785184|gb|EAR16353.1| putative cytosine/adenosine deaminase [Robiginitalea biformata
           HTCC2501]
          Length = 149

 Score =  108 bits (271), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 58/143 (40%), Positives = 83/143 (58%), Gaps = 6/143 (4%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  AL+EA+ A    E+PVGAV  + +++I+RA N   +L DVTAHAE+ AI      L
Sbjct: 10  FMRKALQEAEAAFDLGEVPVGAVITVRDRVIARAHNLTEKLNDVTAHAEMQAITAAANFL 69

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
             + L +  LYVTLEPC MCA A+  +++ R+ YGA +P+ G    G +       H   
Sbjct: 70  GGKYLTDCTLYVTLEPCQMCAGALYWSQVSRVVYGAPDPQRGFTAMGGKL------HPRT 123

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
            + PGI E  +  +++ FF ERR
Sbjct: 124 LVTPGILEAEAAALLKRFFIERR 146


>gi|255659416|ref|ZP_05404825.1| tRNA-specific adenosine deaminase [Mitsuokella multacida DSM 20544]
 gi|260848379|gb|EEX68386.1| tRNA-specific adenosine deaminase [Mitsuokella multacida DSM 20544]
          Length = 169

 Score =  108 bits (271), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 57/150 (38%), Positives = 87/150 (58%), Gaps = 1/150 (0%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAI 59
           M++   +M  ALEEAQ A    E+P+GAV V    ++++R  N      D TAHAE++AI
Sbjct: 1   MQEDAYYMRLALEEAQKAYDLEEVPIGAVLVDREGEVVARGHNMREVWHDATAHAEMIAI 60

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
           R  C    +  L  + LYVT+EPC MCA AI ++R+ R+ YG+++ + G  E+       
Sbjct: 61  REACAKEGRWRLSGLTLYVTIEPCPMCAGAIVMSRVDRVVYGSTDARAGACESVFNIPGC 120

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
              +H PE+  G+ ++    I++ FFKERR
Sbjct: 121 PALNHRPEMTAGVLQEECAGIMKRFFKERR 150


>gi|55821816|ref|YP_140258.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus
           thermophilus LMG 18311]
 gi|55737801|gb|AAV61443.1| cytidine/deoxycytidylate deaminase family protein, putative
           [Streptococcus thermophilus LMG 18311]
          Length = 172

 Score =  108 bits (271), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 57/144 (39%), Positives = 83/144 (57%)

Query: 6   VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           +FMS AL+EAQ +  + EIP+G V V + +I+ R  N   EL     HAE++AI+   R 
Sbjct: 11  IFMSEALKEAQKSLDKAEIPIGCVIVKDREIVGRGHNAREELNQAIMHAEVMAIQEANRT 70

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           +    L +  L+VT+EPC MC+ AI LARI ++ YGA N K GG  +          +H 
Sbjct: 71  VGNWRLLDCTLFVTIEPCVMCSGAIGLARIPKVIYGACNQKFGGAGSLYDILRDDRLNHR 130

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
            E+  G+ E    +I+QDFF++ R
Sbjct: 131 VEVETGVMEADCAKIMQDFFRQSR 154


>gi|269302803|gb|ACZ32903.1| cytidine/deoxycytidylate deaminase family protein [Chlamydophila
           pneumoniae LPCoLN]
          Length = 155

 Score =  108 bits (271), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 59/149 (39%), Positives = 85/149 (57%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M+K   FM  A +EA+ A  ++E+PVG V V ++KII+RA N   +LKD TAHAEIL I 
Sbjct: 1   MEKDIFFMQQAFKEARKAYDQDEVPVGCVIVKDDKIIARAHNSVEKLKDATAHAEILCIG 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              + L    L +  LY TLEPC MCA AI LARI R+ + A + + G   +    +T  
Sbjct: 61  SAAQDLDNWRLLDTVLYCTLEPCLMCAGAIQLARIPRIVWAAPDVRLGAGGSWVNIFTEK 120

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
              H+     G+  + +  +++ FF E+R
Sbjct: 121 HPFHTVSCTGGVCSEEAEHLMKKFFVEKR 149


>gi|332360091|gb|EGJ37905.1| tRNA-specific adenosine deaminase [Streptococcus sanguinis SK1056]
          Length = 156

 Score =  108 bits (271), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 60/149 (40%), Positives = 85/149 (57%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +++   FM  AL+EA+ A   +EIP+G V V   KII R  N   EL+    HAEI+AI 
Sbjct: 6   IEEKEAFMREALKEAEIALAYDEIPIGCVLVKEGKIIGRGHNAREELQRAVMHAEIMAIE 65

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              R  +   L +  L+VT+EPC MC+ AI LARI  + YGA+N K G   +     T  
Sbjct: 66  EANRHENSWRLLDTTLFVTIEPCVMCSGAIGLARIPHVVYGAANQKFGAAGSLYDILTDE 125

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  E+  G+ ++   QI+QDFF++RR
Sbjct: 126 RLNHRVEVETGVLQEECAQIMQDFFRQRR 154


>gi|317126762|ref|YP_004093044.1| CMP/dCMP deaminase zinc-binding protein [Bacillus cellulosilyticus
           DSM 2522]
 gi|315471710|gb|ADU28313.1| CMP/dCMP deaminase zinc-binding protein [Bacillus cellulosilyticus
           DSM 2522]
          Length = 161

 Score =  108 bits (271), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 57/148 (38%), Positives = 87/148 (58%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           K+   FM  AL EA+ A    E+P+GA+ V +N II+R  N   + + VT HAE++AI+ 
Sbjct: 7   KEDIFFMEQALVEAEKAMEIGEVPIGAIIVRDNVIIARGHNLREQQQMVTNHAELIAIQK 66

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
            C  +    L +  LYVTLEPC MCA AI  +R++R+ YGA++PK G   +         
Sbjct: 67  ACEEVGSWRLEDCTLYVTLEPCPMCAGAIVQSRMKRVVYGAADPKAGCCGSLMNLLDEPR 126

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H   +  G+ E+ S ++++DFFK+ R
Sbjct: 127 LNHQVYVTSGLYEEESSRLLKDFFKKLR 154


>gi|116628523|ref|YP_821142.1| cytidine/deoxycytidylate deaminase family protein, putative
           [Streptococcus thermophilus LMD-9]
 gi|116101800|gb|ABJ66946.1| tRNA-adenosine deaminase [Streptococcus thermophilus LMD-9]
          Length = 172

 Score =  108 bits (271), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 57/144 (39%), Positives = 83/144 (57%)

Query: 6   VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           +FMS AL+EAQ +  + EIP+G V V + +I+ R  N   EL     HAE++AI+   R 
Sbjct: 11  IFMSEALKEAQKSLDKAEIPIGCVIVKDREIVGRGHNAREELNQAIMHAEVMAIQEANRT 70

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           +    L +  L+VT+EPC MC+ AI LARI ++ YGA N K GG  +          +H 
Sbjct: 71  VGNWRLLDCTLFVTIEPCVMCSGAIGLARIPKVIYGACNQKFGGAGSLYDILRDERLNHR 130

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
            E+  G+ E    +I+QDFF++ R
Sbjct: 131 VEVETGVMEADCAKIMQDFFRQSR 154


>gi|297172082|gb|ADI23064.1| cytosine/adenosine deaminases [uncultured gamma proteobacterium
           HF0770_07M15]
          Length = 150

 Score =  108 bits (271), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 56/142 (39%), Positives = 80/142 (56%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  A+ +A  A   +E+PVGAV V    +I+RA N+   LKD TAHAE++A+      + 
Sbjct: 1   MQAAIRQAVKAYEEDEVPVGAVVVREGAVIARAWNQVELLKDATAHAEMIALTAAEAAVG 60

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
              L    LYVT EPC MCA A+   RI R+ +GA++P+GG            T +H+ +
Sbjct: 61  DWRLTGCTLYVTKEPCPMCAGALVHCRIDRVVFGATDPRGGAAGGAMNLLQFPTLNHACD 120

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
           I  G+ E   R ++Q FFKE+R
Sbjct: 121 ITGGVMEPDCRNLLQTFFKEKR 142


>gi|262372477|ref|ZP_06065756.1| ComE operon protein 2 [Acinetobacter junii SH205]
 gi|262312502|gb|EEY93587.1| ComE operon protein 2 [Acinetobacter junii SH205]
          Length = 167

 Score =  108 bits (271), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 61/150 (40%), Positives = 83/150 (55%), Gaps = 1/150 (0%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           + K   +M  A E+A  AA + EIPVGAV V  +KII    N   +L D TAHAEI A+R
Sbjct: 3   VNKDEYWMQFAYEQAAIAASQGEIPVGAVIVSQDKIIGSGYNAPIQLSDPTAHAEIQALR 62

Query: 61  MGCRILSQEILPE-VDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
             CR +    LP+   LYVTLEPCTMC  A+  ARI+++ +  + PK G + +  Q    
Sbjct: 63  SACRAIENYRLPDDAVLYVTLEPCTMCVGALIHARIQKVIFATTEPKAGSVVSARQLLDN 122

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
              +H      G  +Q+    + DFFK+RR
Sbjct: 123 GYYNHKFVFEQGCLQQQCSAQLSDFFKQRR 152


>gi|15618909|ref|NP_225195.1| cytosine deaminase [Chlamydophila pneumoniae CWL029]
 gi|16752024|ref|NP_445390.1| cytidine/deoxycytidylate deaminase family protein [Chlamydophila
           pneumoniae AR39]
 gi|4377331|gb|AAD19138.1| cytosine deaminase [Chlamydophila pneumoniae CWL029]
 gi|8163513|gb|AAF73712.1| cytidine/deoxycytidylate deaminase family protein [Chlamydophila
           pneumoniae AR39]
          Length = 155

 Score =  108 bits (271), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 59/149 (39%), Positives = 85/149 (57%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M+K   FM  A +EA+ A  ++E+PVG V V ++KII+RA N   +LKD TAHAEIL I 
Sbjct: 1   MEKDIFFMQQAFKEARKAYDQDEVPVGCVIVKDDKIIARAHNSVEKLKDATAHAEILCIG 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              + L    L +  LY TLEPC MCA AI LARI R+ + A + + G   +    +T  
Sbjct: 61  SAAQDLDNWRLLDTVLYCTLEPCLMCAGAIQLARIPRIVWAAPDVRLGAGGSWVNIFTEE 120

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
              H+     G+  + +  +++ FF E+R
Sbjct: 121 HPFHTVSCTGGVCSEEAEHLMKKFFVEKR 149


>gi|256820484|ref|YP_003141763.1| CMP/dCMP deaminase zinc-binding [Capnocytophaga ochracea DSM 7271]
 gi|256582067|gb|ACU93202.1| CMP/dCMP deaminase zinc-binding [Capnocytophaga ochracea DSM 7271]
          Length = 144

 Score =  108 bits (271), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 58/149 (38%), Positives = 83/149 (55%), Gaps = 6/149 (4%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M     FM  ALEEAQ A   +EIPVGA+  ++N+II++A N    L DVTAHAE+ AI 
Sbjct: 1   MNTDEYFMQKALEEAQLAFEEDEIPVGAIITIDNRIIAKAHNLTERLNDVTAHAEMQAIT 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
           M    L  + L    +Y+TLEPC MCA A+  +++ RL Y A +   G    G +     
Sbjct: 61  MAAHYLGGKYLIGCTMYLTLEPCAMCAGALYWSQLSRLVYAAPDTHRGYSVMGGKL---- 116

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             H   E+  GI  Q +  +++ FF+++R
Sbjct: 117 --HPKTEVVTGILSQEATTLLKQFFQQKR 143


>gi|238926792|ref|ZP_04658552.1| deaminase [Selenomonas flueggei ATCC 43531]
 gi|238885324|gb|EEQ48962.1| deaminase [Selenomonas flueggei ATCC 43531]
          Length = 152

 Score =  108 bits (271), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 57/144 (39%), Positives = 88/144 (61%), Gaps = 3/144 (2%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNN--KIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M  ALEEA+ A L  E+P+GAV +L++   +IS   N      D TAHAE++AIR  C+ 
Sbjct: 8   MRLALEEAKRAYLCGEVPIGAV-ILDDAGSVISSGYNLRETEHDATAHAELIAIRRACKA 66

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           L +  L  + LYVT+EPC MCA AI ++RI R+ YG+++ K G  E+       +  +H 
Sbjct: 67  LGRWRLTGLTLYVTIEPCPMCAGAIVMSRISRVVYGSADSKAGACESLFNITGCSGLNHQ 126

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
           P++  G+  +    ++++FF+ERR
Sbjct: 127 PDVCAGVLAEECAALLRNFFQERR 150


>gi|322374121|ref|ZP_08048655.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus
           sp. C150]
 gi|321277087|gb|EFX54158.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus
           sp. C150]
          Length = 172

 Score =  108 bits (271), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 56/145 (38%), Positives = 85/145 (58%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           + FMS AL+EAQ +  + EIP+G V V + +I+ R  N   EL     HAE++AI+   R
Sbjct: 10  DFFMSEALKEAQKSLDKAEIPIGCVIVKDGEIVGRGHNAREELNQAIMHAEVMAIQEANR 69

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
            +    L +  L+VT+EPC MC+ AI LARI ++ YGASN K GG  +          +H
Sbjct: 70  TIGNWRLLDCTLFVTIEPCVMCSGAIGLARIPKVIYGASNQKFGGAGSLYDILRDERLNH 129

Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149
             ++  G+ E+   +I+Q+FF++ R
Sbjct: 130 RVDLETGVMEKECAEIMQNFFRQSR 154


>gi|309805439|ref|ZP_07699486.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Lactobacillus iners LactinV 09V1-c]
 gi|309810071|ref|ZP_07703917.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Lactobacillus iners SPIN 2503V10-D]
 gi|308165257|gb|EFO67493.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Lactobacillus iners LactinV 09V1-c]
 gi|308169570|gb|EFO71617.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Lactobacillus iners SPIN 2503V10-D]
          Length = 158

 Score =  108 bits (271), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 57/143 (39%), Positives = 82/143 (57%), Gaps = 1/143 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  A  EA  A  + EIP+GAV V     +I R  NR    +D T HAEI+AI+  C+ L
Sbjct: 11  MKLAFLEADKAEQQGEIPIGAVIVDAEGNLIGRGYNRRELDEDATRHAEIIAIQEACKNL 70

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
           +   L +  L+VTLEPC MCA AI  AR++ +YYGA +PK G   +    +     +H P
Sbjct: 71  NSWRLIDCSLFVTLEPCPMCAGAIINARLKNVYYGAFDPKAGACGSVVDLFAFTKFNHHP 130

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           +I+ G+  +++ Q ++ FFK  R
Sbjct: 131 QIFGGLYREQAAQQLKKFFKNIR 153


>gi|296436400|gb|ADH18574.1| cytosine deaminase [Chlamydia trachomatis G/9768]
 gi|296438259|gb|ADH20420.1| cytosine deaminase [Chlamydia trachomatis G/11074]
 gi|297140760|gb|ADH97518.1| cytosine deaminase [Chlamydia trachomatis G/9301]
          Length = 163

 Score =  108 bits (271), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 58/149 (38%), Positives = 85/149 (57%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           ++K   FM  AL+EA+ A  ++E+PVG + V  +KII+R  N   +LKD TAHAE++ + 
Sbjct: 3   IEKDLFFMKKALDEARKAYEQDEVPVGCIIVHGDKIIARGHNSVEQLKDPTAHAEMICVS 62

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
                L    L +  LY TLEPC MCA AI LARI R+ +GA + + G   +    +   
Sbjct: 63  AAAEYLENWRLKDTILYCTLEPCLMCAGAIQLARIPRIVWGAPDLRLGAGGSWLNVFLEK 122

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
              H  E   G+  Q S Q++++FF E+R
Sbjct: 123 HPFHQVECCSGVCYQESEQLMKNFFLEKR 151


>gi|257866910|ref|ZP_05646563.1| cytidine/deoxycytidylate deaminase [Enterococcus casseliflavus
           EC30]
 gi|257872573|ref|ZP_05652226.1| cytidine/deoxycytidylate deaminase [Enterococcus casseliflavus
           EC10]
 gi|257800868|gb|EEV29896.1| cytidine/deoxycytidylate deaminase [Enterococcus casseliflavus
           EC30]
 gi|257806737|gb|EEV35559.1| cytidine/deoxycytidylate deaminase [Enterococcus casseliflavus
           EC10]
          Length = 168

 Score =  108 bits (271), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 55/140 (39%), Positives = 78/140 (55%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  A++EA+ A    E+P+GAV VL+ KII R  N     +   AHAE+ AI   CR +
Sbjct: 15  FMEEAIKEARKAEGLAEVPIGAVVVLDGKIIGRGHNLRETQQQAAAHAEMFAIEEACRTV 74

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  L+VTLEPC MC+ A+ LAR+  +Y+GA +PKGG              +H  
Sbjct: 75  GSWRLEQAQLFVTLEPCPMCSGAMLLARVEEVYFGAYDPKGGTAGTLMNLLEDERFNHWS 134

Query: 127 EIYPGISEQRSRQIIQDFFK 146
            +  GI E+   Q++ DFF+
Sbjct: 135 YVEGGILEEACGQLLTDFFR 154


>gi|71066051|ref|YP_264778.1| tRNA-adenosine deaminase [Psychrobacter arcticus 273-4]
 gi|71039036|gb|AAZ19344.1| tRNA-adenosine deaminase [Psychrobacter arcticus 273-4]
          Length = 195

 Score =  108 bits (271), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 59/144 (40%), Positives = 84/144 (58%), Gaps = 1/144 (0%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M+ AL+ A+  A R E+PVGAV V N +II +  N      D TAHAEI+A+R  C  L
Sbjct: 41  WMTEALKLAKQGAEREEVPVGAVLVHNQQIIGQGFNEPIGRCDATAHAEIVALREACAHL 100

Query: 67  SQEILP-EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
               LP +  LYVTLEPCTMC  A+  AR+ RL Y  + P+ G + +          +H 
Sbjct: 101 KNYRLPLQTTLYVTLEPCTMCIGALIHARVDRLVYSTNEPRAGMVGSQMNLAAQPFYNHH 160

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
            ++  G+  + S Q+++DFF+ERR
Sbjct: 161 MQVDTGLCREHSSQMLKDFFRERR 184


>gi|254448832|ref|ZP_05062288.1| zinc-binding domain protein [gamma proteobacterium HTCC5015]
 gi|198261522|gb|EDY85811.1| zinc-binding domain protein [gamma proteobacterium HTCC5015]
          Length = 163

 Score =  108 bits (271), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 60/147 (40%), Positives = 83/147 (56%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
           +   +M  ALE+A+ AA   E+PVGAV V  +++I+ A NR     D TAHAEI  +R  
Sbjct: 8   RDECYMQLALEQAELAAQVGEVPVGAVLVQGDEVIASAFNRPIAEHDPTAHAEIQVLRQA 67

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
            +      L +  LYVTLEPC MC  AI  ARI RL Y A+ PK G +++          
Sbjct: 68  GQSQQNYRLCDTTLYVTLEPCVMCVGAILHARIGRLVYAAAEPKMGAVDSAFSLLRDERH 127

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
            H  ++  G+ E  SR++IQ FF++RR
Sbjct: 128 FHRMQVASGVLEAPSRELIQSFFRQRR 154


>gi|296332941|ref|ZP_06875399.1| tRNA specific adenosine deaminase [Bacillus subtilis subsp.
           spizizenii ATCC 6633]
 gi|305672716|ref|YP_003864387.1| tRNA specific adenosine deaminase [Bacillus subtilis subsp.
           spizizenii str. W23]
 gi|296149905|gb|EFG90796.1| tRNA specific adenosine deaminase [Bacillus subtilis subsp.
           spizizenii ATCC 6633]
 gi|305410959|gb|ADM36077.1| tRNA specific adenosine deaminase [Bacillus subtilis subsp.
           spizizenii str. W23]
          Length = 161

 Score =  108 bits (270), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 55/149 (36%), Positives = 85/149 (57%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M +  ++M  A++EA+ A  + E+P+GAV V+N++II+RA N     +   AHAE+L I 
Sbjct: 1   MTQDELYMKEAIKEAKKAEEKGEVPIGAVLVVNDEIIARAHNLRETEQRSIAHAEMLVID 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
             C+ L    L    LYVTLEPC MCA A+ L+R+ ++ +GA +PKGG            
Sbjct: 61  EACKALGTWRLEGATLYVTLEPCPMCAGAVVLSRVEKVVFGAFDPKGGCSGTIMNLLQEE 120

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  E+  G+ E+    ++  FF+E R
Sbjct: 121 RFNHQAEVVSGVLEEECGGMLSSFFRELR 149


>gi|327472530|gb|EGF17961.1| tRNA-specific adenosine deaminase [Streptococcus sanguinis SK408]
          Length = 156

 Score =  108 bits (270), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 60/149 (40%), Positives = 85/149 (57%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +++   FM  AL+EA+ A   +EIP+G V V   KII R  N   EL+    HAEI+AI 
Sbjct: 6   IEEKEAFMREALKEAEIALAHDEIPIGCVLVKEGKIIGRGHNAREELQRAVMHAEIMAIE 65

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              R  +   L +  L+VT+EPC MC+ AI LARI  + YGASN K G   +     T  
Sbjct: 66  EANRHENSWRLLDTTLFVTIEPCVMCSGAIGLARIPHVVYGASNQKFGAAGSLYDILTDE 125

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  E+  G+ ++   QI+Q+FF++RR
Sbjct: 126 RLNHRVEVETGVLQEECAQIMQEFFRQRR 154


>gi|160936895|ref|ZP_02084259.1| hypothetical protein CLOBOL_01784 [Clostridium bolteae ATCC
           BAA-613]
 gi|158440085|gb|EDP17832.1| hypothetical protein CLOBOL_01784 [Clostridium bolteae ATCC
           BAA-613]
          Length = 244

 Score =  108 bits (270), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 58/148 (39%), Positives = 83/148 (56%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           +K   FM  AL +AQ AA   ++P+G V V  +KII+R  NR    K V +HAEI++I+ 
Sbjct: 93  QKDEGFMREALRQAQKAAAIGDVPIGCVIVRGDKIIARGYNRRNADKSVLSHAEIISIKK 152

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
            C+ +    L +  +YVTLEPC MCA AI  ARI R+  G  NPK G   +      +  
Sbjct: 153 ACKKIGDWRLEDCTMYVTLEPCPMCAGAIVQARIPRIAVGCMNPKAGCAGSVLDMLHVPG 212

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H  E+  G+ EQ   +++ DFF+  R
Sbjct: 213 FNHQAEVTEGVLEQECSKLMSDFFQSLR 240


>gi|332358122|gb|EGJ35954.1| tRNA-specific adenosine deaminase [Streptococcus sanguinis SK49]
          Length = 156

 Score =  108 bits (270), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 60/149 (40%), Positives = 84/149 (56%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +++   FM  AL+EA+ A   +EIP+G V V   KII R  N   EL+    HAEI+AI 
Sbjct: 6   IEEKEAFMREALKEAEIALAHDEIPIGCVLVKEGKIIGRGHNAREELQRAVMHAEIMAIE 65

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              R  +   L +  L+VT+EPC MC+ AI LARI  + YGA+N K G   +     T  
Sbjct: 66  EANRHENSWRLLDTTLFVTIEPCVMCSGAIGLARIPHVVYGAANQKFGAAGSLYDILTDE 125

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  E+  G+ ++   QI+QDFF+ RR
Sbjct: 126 RLNHRVEVETGVLQEECAQIMQDFFRNRR 154


>gi|239630121|ref|ZP_04673152.1| tRNA-adenosine deaminase [Lactobacillus paracasei subsp. paracasei
           8700:2]
 gi|301067271|ref|YP_003789294.1| cytosine/adenosine deaminase [Lactobacillus casei str. Zhang]
 gi|239527733|gb|EEQ66734.1| tRNA-adenosine deaminase [Lactobacillus paracasei subsp. paracasei
           8700:2]
 gi|300439678|gb|ADK19444.1| Cytosine/adenosine deaminase [Lactobacillus casei str. Zhang]
          Length = 168

 Score =  108 bits (270), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 60/144 (41%), Positives = 81/144 (56%), Gaps = 4/144 (2%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           N FM  AL EA+ AA   E+P+GAV V   +II R  N     +D T HAE+LAI+  C+
Sbjct: 7   NQFMDAALTEAKKAAAIGEVPIGAVIVHQGEIIGRGYNLRETTQDATHHAEMLAIQAACK 66

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC-- 122
            L    L +  L+VTLEPC MCA A+  AR+   Y+GA++PK G    GT +  LA    
Sbjct: 67  TLGTWRLEDCSLFVTLEPCPMCAGAMINARVATCYFGATDPKAG--VAGTFYNLLADTRF 124

Query: 123 HHSPEIYPGISEQRSRQIIQDFFK 146
           +H   +  GI    S  ++Q FF+
Sbjct: 125 NHQVVVVSGIKADESATLLQTFFR 148


>gi|256848137|ref|ZP_05553581.1| tRNA-adenosine deaminase [Lactobacillus coleohominis 101-4-CHN]
 gi|256715197|gb|EEU30174.1| tRNA-adenosine deaminase [Lactobacillus coleohominis 101-4-CHN]
          Length = 169

 Score =  108 bits (270), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 54/143 (37%), Positives = 80/143 (55%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  A+ EA  A L  E+P+GAV V + +II    N   + +    HAEILAI   C  L
Sbjct: 12  FMRAAINEAHQAELLGEVPIGAVIVKDGQIIGAGHNMREKYQQSIYHAEILAIMEACDAL 71

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L + DLYVTLEPC MC+ AI  +R+R++YY A +PK G + +       +  +H  
Sbjct: 72  HSWRLEDCDLYVTLEPCIMCSGAIIHSRLRQVYYAAPDPKAGAVNSLYTLLNDSRLNHQV 131

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
            ++ G+ +    Q+++ FF+E R
Sbjct: 132 TVHQGLLQDECSQMLKHFFREIR 154


>gi|331701735|ref|YP_004398694.1| CMP/dCMP deaminase zinc-binding protein [Lactobacillus buchneri
           NRRL B-30929]
 gi|329129078|gb|AEB73631.1| CMP/dCMP deaminase zinc-binding protein [Lactobacillus buchneri
           NRRL B-30929]
          Length = 165

 Score =  108 bits (270), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 57/139 (41%), Positives = 78/139 (56%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  AL EA  A L  E+P+GAV V +  I+ R  N    L D TAHAEILAI+  CR L
Sbjct: 8   FMKAALIEANKAYLIGEVPIGAVVVHDGTIVGRGHNLREHLNDGTAHAEILAIQEACRTL 67

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L + DLYVT+EPC MCA AI  +RI  + +G+ +PK G   +       +  +H  
Sbjct: 68  RSWRLIDCDLYVTIEPCLMCAGAIINSRIENVCFGSRDPKAGATRSLYAVLEDSRLNHQV 127

Query: 127 EIYPGISEQRSRQIIQDFF 145
            +  G+    + +I++DFF
Sbjct: 128 NVVEGLYADAASRIMKDFF 146


>gi|194333451|ref|YP_002015311.1| CMP/dCMP deaminase [Prosthecochloris aestuarii DSM 271]
 gi|194311269|gb|ACF45664.1| CMP/dCMP deaminase zinc-binding [Prosthecochloris aestuarii DSM
           271]
          Length = 154

 Score =  108 bits (270), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 60/144 (41%), Positives = 79/144 (54%), Gaps = 1/144 (0%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           FM  A  EA  A  + EIPVGAV    N  I+ R  N+   L D TAHAEI+A+      
Sbjct: 6   FMEQAFREAIKAYEKKEIPVGAVVFDSNGSIVGRGYNQVEALSDATAHAEIIALTSAMAT 65

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           L  + L +  L VTLEPC MCA AI  A++ RL +GA +PK G              +H 
Sbjct: 66  LGSKYLSDCTLAVTLEPCPMCAGAIVNAKVGRLIFGAYDPKMGACGTVMNITGNRQLNHQ 125

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
           PE+Y GI E +++ ++QDFF+  R
Sbjct: 126 PEVYGGILEHKAQSLLQDFFRGLR 149


>gi|104774442|ref|YP_619422.1| cytosine/adenosine deaminase [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC 11842]
 gi|116514541|ref|YP_813447.1| cytosine/adenosine deaminase [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC BAA-365]
 gi|103423523|emb|CAI98425.1| Cytosine/adenosine deaminase [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC 11842]
 gi|116093856|gb|ABJ59009.1| tRNA-adenosine deaminase [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC BAA-365]
 gi|325126252|gb|ADY85582.1| Cytidine-deoxycytidylate deaminase [Lactobacillus delbrueckii
           subsp. bulgaricus 2038]
          Length = 169

 Score =  108 bits (270), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 52/130 (40%), Positives = 84/130 (64%), Gaps = 1/130 (0%)

Query: 21  RNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVT 79
           ++E+P+GAV V  + +II R  NR    +D TAHAEILAI+  C+ L    L + +L+VT
Sbjct: 24  QDEVPIGAVVVGPDGQIIGRGYNRRELDEDGTAHAEILAIKEACQKLDSWRLIDCNLFVT 83

Query: 80  LEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139
           LEPC MCA AI  +RI+ +Y+ A +PK G   +    +++   +H P++  G+ +++  Q
Sbjct: 84  LEPCAMCAGAIINSRIKEVYFAAMDPKAGAAGSVVDLFSVEKFNHHPKVIRGLYKEQGAQ 143

Query: 140 IIQDFFKERR 149
           +++DFF+E R
Sbjct: 144 LLKDFFREIR 153


>gi|255693703|ref|ZP_05417378.1| cytidine/deoxycytidylate deaminase family protein [Bacteroides
           finegoldii DSM 17565]
 gi|260620520|gb|EEX43391.1| cytidine/deoxycytidylate deaminase family protein [Bacteroides
           finegoldii DSM 17565]
          Length = 145

 Score =  108 bits (270), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 60/149 (40%), Positives = 81/149 (54%), Gaps = 5/149 (3%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M     FM  AL EA  AA R E+PVGAV V   +II+RA N    L DVTAHAE+ AI 
Sbjct: 1   MLDDTYFMKQALIEAGKAAERGEVPVGAVVVCKERIIARAHNLTETLNDVTAHAEMQAIT 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
               +L  + L E  LYVT+EPC MCA AI+ A+  +L +GA + K      G Q Y ++
Sbjct: 61  AAANVLGGKYLNECTLYVTVEPCVMCAGAIAWAQTGKLVFGAEDEK-----RGYQKYAVS 115

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             H    +  G+       ++++FF  +R
Sbjct: 116 ALHPKTVVVKGLLADECAALMKNFFAAKR 144


>gi|327459989|gb|EGF06328.1| tRNA-specific adenosine deaminase [Streptococcus sanguinis SK1]
          Length = 156

 Score =  108 bits (270), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 60/149 (40%), Positives = 84/149 (56%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +++   FM  AL+EA+ A   +EIP+G V V   KII R  N   EL+    HAEI+AI 
Sbjct: 6   IEEKEAFMREALKEAEIALAHDEIPIGCVLVKEGKIIGRGHNAREELQRAVMHAEIMAIE 65

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              R  +   L +  L+VT+EPC MC+ AI LARI  + YGA+N K G   +     T  
Sbjct: 66  EANRHENSWRLLDTTLFVTIEPCVMCSGAIGLARIPHVIYGAANQKFGAAGSLYDILTDE 125

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  E+  G+ ++   QI+QDFF+ RR
Sbjct: 126 RLNHRVEVETGVLQEECAQIMQDFFRNRR 154


>gi|264677875|ref|YP_003277782.1| CMP/dCMP deaminase, zinc-binding protein [Comamonas testosteroni
           CNB-2]
 gi|262208388|gb|ACY32486.1| CMP/dCMP deaminase, zinc-binding protein [Comamonas testosteroni
           CNB-2]
          Length = 457

 Score =  108 bits (270), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 55/143 (38%), Positives = 81/143 (56%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  ALE+A+ AA   E+PVGAV V + ++I R  N     +D TAHAE+LA+R   R L
Sbjct: 11  FMRQALEQARRAAACGEVPVGAVVVKDGQVIGRGHNSPLSAQDPTAHAEVLALREAARTL 70

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L    LYVTLEPCTMC+ A+  AR+  + YGA+ P+ G   +    +     +H  
Sbjct: 71  GNYRLEGCTLYVTLEPCTMCSGAMLHARVDAVVYGAAEPRTGAAGSVLDVFGYPAINHQT 130

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
            +  G+   +   ++ +FF++RR
Sbjct: 131 RVLRGVLAAQCSALMAEFFQQRR 153


>gi|196251180|ref|ZP_03149855.1| CMP/dCMP deaminase zinc-binding [Geobacillus sp. G11MC16]
 gi|196209306|gb|EDY04090.1| CMP/dCMP deaminase zinc-binding [Geobacillus sp. G11MC16]
          Length = 169

 Score =  108 bits (270), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 57/149 (38%), Positives = 80/149 (53%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M     +M  A+EEA+ A    E+P+GAV V + ++I+RA N     +   AHAEILAI 
Sbjct: 10  MNNDEYYMRLAIEEAKKAEQIGEVPIGAVIVQDGRVIARAHNLRETEQRAIAHAEILAID 69

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
             C+      L    LYVTLEPC MCA AI L+RI R+ +GAS+PKGG           +
Sbjct: 70  EACQATGSWRLERATLYVTLEPCAMCAGAIVLSRIERVVFGASDPKGGCAGTLMNLLQES 129

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  ++  G+       ++ DFF+  R
Sbjct: 130 RFNHQADVTSGVLASECGSLLSDFFRRLR 158


>gi|332365640|gb|EGJ43399.1| tRNA-specific adenosine deaminase [Streptococcus sanguinis SK355]
          Length = 156

 Score =  108 bits (270), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 60/143 (41%), Positives = 81/143 (56%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  AL+EA+ A   +EIP+G V V   KII R  N   EL+    HAEI+AI    R  
Sbjct: 12  FMREALKEAEIALAHDEIPIGCVLVKEGKIIGRGHNAREELQRAVMHAEIMAIEEANRHE 71

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
           +   L +  L+VT+EPC MC+ AI LARI  + YGA+N K G   +     T    +H  
Sbjct: 72  NSWRLLDTTLFVTIEPCVMCSGAIGLARIPHVVYGAANQKFGAAGSLYDILTDERLNHRV 131

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+  G+ ++   QI+QDFF+ RR
Sbjct: 132 EVETGVLQEECAQIMQDFFRNRR 154


>gi|262278921|ref|ZP_06056706.1| conserved hypothetical protein [Acinetobacter calcoaceticus
           RUH2202]
 gi|262259272|gb|EEY78005.1| conserved hypothetical protein [Acinetobacter calcoaceticus
           RUH2202]
          Length = 167

 Score =  108 bits (269), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 61/144 (42%), Positives = 80/144 (55%), Gaps = 1/144 (0%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  A E+A+ AA + EIPVGAV V  N++I    N    L D TAHAEI AIR  C  L
Sbjct: 9   WMQLAYEQAELAAQQGEIPVGAVVVSQNRVIGSGYNAPISLLDPTAHAEIQAIRAACLSL 68

Query: 67  SQEILPE-VDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
               LPE   LYVTLEPCTMC  A+  ARI+ + +G + PK G + +  Q       +H 
Sbjct: 69  ENYRLPEDATLYVTLEPCTMCVGALVHARIKHVVFGTTEPKAGSLVSTRQLLQHGYYNHR 128

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
                G  +++  Q +  FFK+RR
Sbjct: 129 FTFEHGCLQEKCAQQLSHFFKQRR 152


>gi|242372784|ref|ZP_04818358.1| deaminase [Staphylococcus epidermidis M23864:W1]
 gi|242349557|gb|EES41158.1| deaminase [Staphylococcus epidermidis M23864:W1]
          Length = 168

 Score =  108 bits (269), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 58/149 (38%), Positives = 84/149 (56%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M+  N +M  A++EA+ A    E+P+GAV V +N +I+RA N    L+  TAHAE +AI 
Sbjct: 1   MRTDNDYMRLAIKEARKAQELGEVPIGAVIVKDNHVIARAHNLRETLQQPTAHAEHIAIE 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
               ++    L +  LYVTLEPC MCA AI ++RI R+ YGA +PKGG   +        
Sbjct: 61  RASEVIGSWRLEDCTLYVTLEPCVMCAGAIVMSRIPRVVYGAIDPKGGCTGSLMNLLAQP 120

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H   +  GI E     ++++FFK  R
Sbjct: 121 QFNHRAIVESGILENECSTLLREFFKNIR 149


>gi|183599769|ref|ZP_02961262.1| hypothetical protein PROSTU_03276 [Providencia stuartii ATCC 25827]
 gi|188022032|gb|EDU60072.1| hypothetical protein PROSTU_03276 [Providencia stuartii ATCC 25827]
          Length = 178

 Score =  108 bits (269), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 60/143 (41%), Positives = 84/143 (58%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  ALE A+NA    EIPVGA+ V +N++I+   NR+ E  D TAHAEI+ ++ G R L
Sbjct: 10  WMKRALELAKNAQDAGEIPVGALLVKDNQLIASGWNRSIESHDPTAHAEIMVLQQGGRAL 69

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
           S   L +  LYVTLEPC MCA A+  +RI RL YGA + K G   +          +H  
Sbjct: 70  SNYRLLDTTLYVTLEPCIMCAGALVHSRIGRLVYGARDFKTGACGSFINILERPGLNHYV 129

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           ++  G+ E+    ++ +FFK RR
Sbjct: 130 DVKGGVLEETCSAMLSNFFKMRR 152


>gi|138893694|ref|YP_001124147.1| cytosine deaminase [Geobacillus thermodenitrificans NG80-2]
 gi|134265207|gb|ABO65402.1| Cytosine deaminase [Geobacillus thermodenitrificans NG80-2]
          Length = 161

 Score =  108 bits (269), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 57/149 (38%), Positives = 80/149 (53%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M     +M  A+EEA+ A    E+P+GAV V + ++I+RA N     +   AHAEILAI 
Sbjct: 2   MNNDEYYMRLAIEEAKKAEQIGEVPIGAVIVQDGRVIARAHNLRETEQRAIAHAEILAIA 61

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
             C+      L    LYVTLEPC MCA AI L+RI R+ +GAS+PKGG           +
Sbjct: 62  EACQATGSWRLERATLYVTLEPCAMCAGAIVLSRIERVVFGASDPKGGCAGTLMNLLQES 121

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  ++  G+       ++ DFF+  R
Sbjct: 122 RFNHQADVTSGVLASECGSLLSDFFRRLR 150


>gi|186684043|ref|YP_001867239.1| CMP/dCMP deaminase, zinc-binding [Nostoc punctiforme PCC 73102]
 gi|186466495|gb|ACC82296.1| CMP/dCMP deaminase, zinc-binding [Nostoc punctiforme PCC 73102]
          Length = 161

 Score =  108 bits (269), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 61/144 (42%), Positives = 81/144 (56%), Gaps = 1/144 (0%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNN-KIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           +MSCALE A+ A    E+PVGAV + +  K++++  NR    KD TAHAEILA++     
Sbjct: 14  WMSCALELAKVAGDAGEVPVGAVIIDSTGKLLAQGENRKERDKDPTAHAEILALKTAATT 73

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           L    L E  LYVTLEPC MCA AI  AR+ +L YG  + K G I         A  +H 
Sbjct: 74  LQNWHLNECTLYVTLEPCPMCAGAILQARVGQLVYGVDDTKTGAIRTVINIPDSAASNHG 133

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
            ++  GI E   R+ +Q +F  RR
Sbjct: 134 LQVIGGILESACREQLQAWFATRR 157


>gi|59711257|ref|YP_204033.1| tRNA-specific adenosine deaminase [Vibrio fischeri ES114]
 gi|59479358|gb|AAW85145.1| tRNA-specific adenosine deaminase [Vibrio fischeri ES114]
          Length = 171

 Score =  108 bits (269), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 58/144 (40%), Positives = 82/144 (56%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           +  + +M  A+E A  A    E+PVGAV VL+++II    NR+    D TAHAE++AI+ 
Sbjct: 8   RDASFYMQRAMELAAIAEQEGEVPVGAVIVLDDEIIGEGWNRSISTHDATAHAEMMAIKQ 67

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
               +    L +  LYVTLEPC MCA AI  +RI+R+ +GAS+ K G   +    +T AT
Sbjct: 68  AGSKIENYRLVDATLYVTLEPCPMCAGAIVHSRIKRVIFGASDMKTGASGSVINLFTSAT 127

Query: 122 CHHSPEIYPGISEQRSRQIIQDFF 145
             H  E   G+ E+  R  +Q FF
Sbjct: 128 AFHFVECESGVMEEACRSQLQAFF 151


>gi|171911154|ref|ZP_02926624.1| cytidine/deoxycytidylate deaminase family protein [Verrucomicrobium
           spinosum DSM 4136]
          Length = 176

 Score =  108 bits (269), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 57/143 (39%), Positives = 83/143 (58%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  AL +A+ AA ++E+P+GAV V  ++II+RA N+   LKD TAHAE++A+      L
Sbjct: 16  YMREALRQARKAARQDEVPIGAVIVHGSQIIARAWNQVETLKDATAHAEMIALTQAQGAL 75

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L E DLYVT EPC MCA AI   R+RR+ +G  + KGG              +H  
Sbjct: 76  GDWRLNECDLYVTKEPCPMCAGAIMHCRVRRVIFGCPDLKGGAAGGYWNLLQSPNLNHRS 135

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           EI  G+  +   ++++ FF+E R
Sbjct: 136 EITAGVLGEECVEVLKSFFREAR 158


>gi|282918346|ref|ZP_06326083.1| tRNA-adenosine deaminase [Staphylococcus aureus subsp. aureus C427]
 gi|282317480|gb|EFB47852.1| tRNA-adenosine deaminase [Staphylococcus aureus subsp. aureus C427]
          Length = 156

 Score =  108 bits (269), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 54/143 (37%), Positives = 83/143 (58%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM+ A+EEA+ AA   E+P+GA+   ++++I+RA N    L+  TAHAE +AI    ++L
Sbjct: 7   FMTLAIEEAKKAAQLGEVPIGAIITKDDEVIARANNLRETLQQPTAHAEHIAIERAAKVL 66

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  LYVTLEPC MCA  I ++RI R+ YGA +PKGG   +       +  +H  
Sbjct: 67  GSWRLEDCTLYVTLEPCVMCAGTIVMSRIPRVVYGADDPKGGCSGSLMNLLQQSNFNHRA 126

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
            +  G+ ++    ++  FFK  R
Sbjct: 127 IVDKGVLKEACSTLLTTFFKNLR 149


>gi|162147097|ref|YP_001601558.1| cytidine deaminase protein [Gluconacetobacter diazotrophicus PAl 5]
 gi|161785674|emb|CAP55245.1| putative cytidine deaminase protein [Gluconacetobacter
           diazotrophicus PAl 5]
          Length = 193

 Score =  108 bits (269), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 55/129 (42%), Positives = 76/129 (58%), Gaps = 1/129 (0%)

Query: 22  NEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80
            E+PVGAV +  +  I++RAGN+     D  AHAE+L +R   RIL    L    L VTL
Sbjct: 44  GEVPVGAVLLGPDGTILARAGNQVEAGHDAAAHAEMLVMRAAARILGSPRLTGCTLVVTL 103

Query: 81  EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140
           EPC MCAAA    R+ R+ +GA +PKGGG+E+G +      C H PE   G+ E+ +  +
Sbjct: 104 EPCPMCAAASVHFRVGRIVFGAYDPKGGGVEHGPRLLARPDCLHRPEWVGGVREREAAAL 163

Query: 141 IQDFFKERR 149
           ++DFF   R
Sbjct: 164 LRDFFAALR 172


>gi|313896633|ref|ZP_07830182.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Selenomonas sp. oral taxon 137 str. F0430]
 gi|320529093|ref|ZP_08030185.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Selenomonas artemidis F0399]
 gi|312974818|gb|EFR40284.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Selenomonas sp. oral taxon 137 str. F0430]
 gi|320138723|gb|EFW30613.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Selenomonas artemidis F0399]
          Length = 156

 Score =  108 bits (269), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 59/143 (41%), Positives = 80/143 (55%), Gaps = 1/143 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  AL EA+ A    E+P+GAV +     I+S   N      D TAHAE++AIR  CR L
Sbjct: 8   MRLALAEAERAYALGEVPIGAVVMDGAGNIVSTGHNLRESEHDATAHAELIAIRRACRAL 67

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
            +  L  + LYVT+EPC MCA AI ++RI R+ YGA++ K G  E+        T +H P
Sbjct: 68  GRWRLTGMTLYVTIEPCPMCAGAIVMSRISRVVYGAADSKAGACESLFNIPGCMTLNHRP 127

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+Y  +       I++ FF ERR
Sbjct: 128 EVYGQVMADECHAIMRRFFNERR 150


>gi|237714907|ref|ZP_04545388.1| conserved hypothetical protein [Bacteroides sp. D1]
 gi|262406825|ref|ZP_06083374.1| ComE operon protein 2 [Bacteroides sp. 2_1_22]
 gi|298483658|ref|ZP_07001833.1| cytidine/deoxycytidylate deaminase family protein [Bacteroides sp.
           D22]
 gi|229445232|gb|EEO51023.1| conserved hypothetical protein [Bacteroides sp. D1]
 gi|262355528|gb|EEZ04619.1| ComE operon protein 2 [Bacteroides sp. 2_1_22]
 gi|295084706|emb|CBK66229.1| Cytosine/adenosine deaminases [Bacteroides xylanisolvens XB1A]
 gi|298270228|gb|EFI11814.1| cytidine/deoxycytidylate deaminase family protein [Bacteroides sp.
           D22]
          Length = 145

 Score =  108 bits (269), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 60/143 (41%), Positives = 79/143 (55%), Gaps = 5/143 (3%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  AL EA  AA R E+PVGAV V   +II+RA N    L DVTAHAE+ AI     +L
Sbjct: 7   FMKQALIEAGKAAERGEVPVGAVVVCKERIIARAHNLTETLNDVTAHAEMQAITAAANVL 66

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
             + L E  LYVT+EPC MCA AI+ A+  +L +GA + K      G Q Y  +  H   
Sbjct: 67  GGKYLNECTLYVTVEPCVMCAGAIAWAQTGKLVFGAEDEK-----RGYQKYAGSALHPKT 121

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
            +  GI       ++++FF  +R
Sbjct: 122 VVVKGIMADECAALMKEFFAAKR 144


>gi|323350632|ref|ZP_08086294.1| tRNA-specific adenosine deaminase [Streptococcus sanguinis VMC66]
 gi|322123314|gb|EFX94999.1| tRNA-specific adenosine deaminase [Streptococcus sanguinis VMC66]
          Length = 156

 Score =  108 bits (269), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 60/143 (41%), Positives = 81/143 (56%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  AL+EA+ A   +EIP+G V V   KII R  N   EL+    HAEI+AI    R  
Sbjct: 12  FMREALKEAEIALAHDEIPIGCVLVKEGKIIGRGHNAREELQRAVMHAEIMAIEEANRHE 71

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
           +   L +  L+VT+EPC MC+ AI LARI  + YGA+N K G   +     T    +H  
Sbjct: 72  NSWRLLDTTLFVTIEPCVMCSGAIGLARIPHVVYGAANQKFGAAGSLYDILTDERLNHRV 131

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+  G+ ++   QI+QDFF+ RR
Sbjct: 132 EVETGVLQEDCAQIMQDFFRNRR 154


>gi|282852744|ref|ZP_06262086.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Lactobacillus gasseri 224-1]
 gi|282556486|gb|EFB62106.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Lactobacillus gasseri 224-1]
          Length = 150

 Score =  108 bits (269), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 51/143 (35%), Positives = 86/143 (60%), Gaps = 1/143 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNREL-KDVTAHAEILAIRMGCRIL 66
           M  A  +A+ A  + E+P+GA+ V  +  +   G   REL +D T HAE++AIR  C+ L
Sbjct: 1   MQLAFAQAKKAEDQGEVPIGAIVVDKDGNVIGEGYNRRELDEDATQHAEMIAIRQACQNL 60

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  L++TLEPC MC+ AI  +R+  +YYGA +PK G   +    + +   +H P
Sbjct: 61  GSWRLVDCSLFITLEPCPMCSGAIINSRLAEVYYGAFDPKAGAAGSVIDLFKVEKFNHHP 120

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           +++ G+ + ++ Q+++DFF+E R
Sbjct: 121 KVFGGLFKDQAAQMLKDFFREIR 143


>gi|284040230|ref|YP_003390160.1| CMP/dCMP deaminase zinc-binding protein [Spirosoma linguale DSM 74]
 gi|283819523|gb|ADB41361.1| CMP/dCMP deaminase zinc-binding protein [Spirosoma linguale DSM 74]
          Length = 144

 Score =  108 bits (269), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 58/145 (40%), Positives = 83/145 (57%), Gaps = 5/145 (3%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           + FM  AL  A+ AA   EIPVGA+ V  N+II++A N+  +LKDVTAHAEI+AI    +
Sbjct: 4   DYFMEIALTLAEEAADNGEIPVGAIVVCRNRIIAKARNQTEQLKDVTAHAEIMAITSATQ 63

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
            L  + LP+  +YVTLEPC MCA A+  A++ RL  GA++ + G     T        H 
Sbjct: 64  YLGSKYLPDCTMYVTLEPCVMCAGALFWAQLGRLVIGAADARRGYSRVETNLL-----HP 118

Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149
              +  G+  + S+ ++  FF   R
Sbjct: 119 KTRVETGVLAEESQALLAKFFTRLR 143


>gi|171058718|ref|YP_001791067.1| CMP/dCMP deaminase zinc-binding [Leptothrix cholodnii SP-6]
 gi|170776163|gb|ACB34302.1| CMP/dCMP deaminase zinc-binding [Leptothrix cholodnii SP-6]
          Length = 231

 Score =  108 bits (269), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 56/146 (38%), Positives = 86/146 (58%), Gaps = 4/146 (2%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNN----KIISRAGNRNRELKDVTAHAEILAIRMGC 63
           M  AL++A NA L  E+PVGAV V +     ++I+   NR     D TAHAE++A+R   
Sbjct: 15  MRLALDQALNAHLAGEVPVGAVIVRHTADGPQVIATGYNRPVTTNDPTAHAELVALRHAA 74

Query: 64  RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123
            +L    LP+ ++Y+TLEPC MCA A+  AR+RR+ +GA +PK G   +    + L   +
Sbjct: 75  TLLENYRLPDCEIYITLEPCAMCAMALLHARLRRVVFGAWDPKTGAAGSVVNLFDLPQLN 134

Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149
           H  E+  G+      +++++FF ERR
Sbjct: 135 HQTEVQGGVLADSCGRVLREFFVERR 160


>gi|78186386|ref|YP_374429.1| cytosine deaminase, putative [Chlorobium luteolum DSM 273]
 gi|78166288|gb|ABB23386.1| tRNA-adenosine deaminase [Chlorobium luteolum DSM 273]
          Length = 153

 Score =  108 bits (269), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 57/144 (39%), Positives = 82/144 (56%), Gaps = 1/144 (0%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           FM  A  EA+ A    E+PVGAV +  ++ ++ R  N+   L D TAHAEI+A+      
Sbjct: 6   FMELAFREARKAFEAGEVPVGAVVLDASSHVVGRGYNQVETLSDATAHAEIIALTAAMAT 65

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           L  + L +  L VTLEPC MCA AI  A++ R+ +GA +PK G   +          +H 
Sbjct: 66  LGNKYLNDCTLVVTLEPCPMCAGAIVNAKVGRVVFGAYDPKMGAAGSVLNVTGCRALNHQ 125

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
           PE++ GI E R++ ++QDFF E R
Sbjct: 126 PEVFGGIMEARAQGLLQDFFAELR 149


>gi|305665590|ref|YP_003861877.1| putative cytosine/adenosine deaminase [Maribacter sp. HTCC2170]
 gi|88710346|gb|EAR02578.1| putative cytosine/adenosine deaminase [Maribacter sp. HTCC2170]
          Length = 149

 Score =  108 bits (269), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 55/143 (38%), Positives = 86/143 (60%), Gaps = 6/143 (4%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  AL+EA+ A  + E+P+GA+ V++++II+RA N   +L DVTAHAE+ AI      L
Sbjct: 10  FMKKALQEAEAAYEKGEVPIGAIIVIDDRIIARAHNLTEQLNDVTAHAEMQAITAAANFL 69

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
             + L    +YVTLEPC MCA A+  ++I ++ +GA + + G    GT+       H   
Sbjct: 70  GGKYLQNCTMYVTLEPCQMCAGALYWSQISKIVFGAKDTERGCGAMGTKL------HPKT 123

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           +I  G+ E  + ++++ FF ERR
Sbjct: 124 KITGGVMENEASELLKRFFIERR 146


>gi|154494050|ref|ZP_02033370.1| hypothetical protein PARMER_03395 [Parabacteroides merdae ATCC
           43184]
 gi|154086310|gb|EDN85355.1| hypothetical protein PARMER_03395 [Parabacteroides merdae ATCC
           43184]
          Length = 147

 Score =  107 bits (268), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 59/143 (41%), Positives = 82/143 (57%), Gaps = 5/143 (3%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  AL EA +AA   E+PVGAV V NN+II+RA N+   L D TAHAE+LAI     +L
Sbjct: 10  FMKQALVEACSAAEEGEVPVGAVIVCNNQIIARAHNQTERLNDPTAHAEMLAITAAVGVL 69

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
             + L    LYVT+EPC MCA AI  +++ ++ YGA++ K      G Q Y     H   
Sbjct: 70  GAKYLTGCSLYVTVEPCVMCAGAIGWSQLSKIVYGATDEK-----RGFQQYAPKALHPKA 124

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
            +  G+ E    + ++ FF+ +R
Sbjct: 125 TVKKGVLENECAEEMRKFFQRKR 147


>gi|325685703|gb|EGD27782.1| cytidine/deoxycytidylate deaminase [Lactobacillus delbrueckii
           subsp. lactis DSM 20072]
          Length = 169

 Score =  107 bits (268), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 52/130 (40%), Positives = 83/130 (63%), Gaps = 1/130 (0%)

Query: 21  RNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVT 79
           ++E+P+GAV V  + +II R  NR    +D TAHAEILAI+  C+ L    L +  L+VT
Sbjct: 24  QDEVPIGAVVVGPDGQIIGRGYNRRELDEDGTAHAEILAIKEACQKLDSWRLIDCSLFVT 83

Query: 80  LEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139
           LEPC MCA AI  +RI+ +Y+ A +PK G   +    +++   +H P++  G+ +++  Q
Sbjct: 84  LEPCAMCAGAIINSRIKEVYFAAMDPKAGAAGSVVDLFSVEKFNHHPKVIRGLYKEQGAQ 143

Query: 140 IIQDFFKERR 149
           +++DFF+E R
Sbjct: 144 LLKDFFREIR 153


>gi|209544158|ref|YP_002276387.1| CMP/dCMP deaminase [Gluconacetobacter diazotrophicus PAl 5]
 gi|209531835|gb|ACI51772.1| CMP/dCMP deaminase zinc-binding [Gluconacetobacter diazotrophicus
           PAl 5]
          Length = 178

 Score =  107 bits (268), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 55/129 (42%), Positives = 76/129 (58%), Gaps = 1/129 (0%)

Query: 22  NEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80
            E+PVGAV +  +  I++RAGN+     D  AHAE+L +R   RIL    L    L VTL
Sbjct: 29  GEVPVGAVLLGPDGTILARAGNQVEAGHDAAAHAEMLVMRAAARILGSPRLTGCTLVVTL 88

Query: 81  EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140
           EPC MCAAA    R+ R+ +GA +PKGGG+E+G +      C H PE   G+ E+ +  +
Sbjct: 89  EPCPMCAAASVHFRVGRIVFGAYDPKGGGVEHGPRLLARPDCLHRPEWVGGVREREAAAL 148

Query: 141 IQDFFKERR 149
           ++DFF   R
Sbjct: 149 LRDFFAALR 157


>gi|270294540|ref|ZP_06200742.1| conserved hypothetical protein [Bacteroides sp. D20]
 gi|270276007|gb|EFA21867.1| conserved hypothetical protein [Bacteroides sp. D20]
          Length = 144

 Score =  107 bits (268), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 59/145 (40%), Positives = 80/145 (55%), Gaps = 5/145 (3%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           + +M  AL EA  A  R E+PVGAV V  ++II+RA N    L DVTAHAE+ AI     
Sbjct: 4   SYYMKQALLEAHKAGERGEVPVGAVVVCKDRIIARAHNLTETLTDVTAHAEMQAITAAAA 63

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
            L  + L E  LYVT+EPC MCA AI+ A++ RL +GA + K      G Q Y     H 
Sbjct: 64  TLGGKYLNECTLYVTVEPCVMCAGAIAWAQMGRLVFGAEDEK-----RGYQRYASQALHP 118

Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149
             ++  GI       ++++FF  +R
Sbjct: 119 KTQVVKGILADECAALMKEFFAAKR 143


>gi|317481165|ref|ZP_07940240.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Bacteroides sp. 4_1_36]
 gi|316902661|gb|EFV24540.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Bacteroides sp. 4_1_36]
          Length = 146

 Score =  107 bits (268), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 59/145 (40%), Positives = 80/145 (55%), Gaps = 5/145 (3%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           + +M  AL EA  A  R E+PVGAV V  ++II+RA N    L DVTAHAE+ AI     
Sbjct: 6   SYYMKQALLEAHKAGERGEVPVGAVVVCKDRIIARAHNLTETLTDVTAHAEMQAITAAAA 65

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
            L  + L E  LYVT+EPC MCA AI+ A++ RL +GA + K      G Q Y     H 
Sbjct: 66  TLGGKYLNECTLYVTVEPCVMCAGAIAWAQMGRLVFGAEDEK-----RGYQRYASQALHP 120

Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149
             ++  GI       ++++FF  +R
Sbjct: 121 KTQVVKGILADECAALMKEFFAAKR 145


>gi|116493223|ref|YP_804958.1| tRNA-adenosine deaminase [Pediococcus pentosaceus ATCC 25745]
 gi|116103373|gb|ABJ68516.1| tRNA-adenosine deaminase [Pediococcus pentosaceus ATCC 25745]
          Length = 161

 Score =  107 bits (268), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 52/145 (35%), Positives = 84/145 (57%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           N +M+ A++EAQ A + +E+P+GAV V + KII R  N     +D T HAE+LAI   C 
Sbjct: 10  NFYMNEAIKEAQFAKMIDEVPIGAVVVHDGKIIGRGHNLREHSQDSTTHAEVLAITEACA 69

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
            L    L +  L+VT+EPC MC+  I  +++ ++++GA +PK G + +          +H
Sbjct: 70  YLKSWRLWDCQLFVTIEPCLMCSGTIINSQLPQVFFGARDPKAGAVRSLYTVLEDTRLNH 129

Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149
              ++ GI   R+  +++ FFKE R
Sbjct: 130 QVTVHEGIEADRASMLMKTFFKEIR 154


>gi|322434989|ref|YP_004217201.1| CMP/dCMP deaminase zinc-binding protein [Acidobacterium sp.
           MP5ACTX9]
 gi|321162716|gb|ADW68421.1| CMP/dCMP deaminase zinc-binding protein [Acidobacterium sp.
           MP5ACTX9]
          Length = 292

 Score =  107 bits (268), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 58/126 (46%), Positives = 74/126 (58%)

Query: 24  IPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83
           +PVGAV VLNN+II+R  NR     D TAHAEI+A+R   RIL    L   DLY TLEPC
Sbjct: 24  VPVGAVLVLNNEIIARGRNRVILDSDPTAHAEIVALREAGRILGNYRLENCDLYTTLEPC 83

Query: 84  TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQD 143
            MCA AI  ARIRRL Y A++PK G   +          +H  E+  G+  +   +++  
Sbjct: 84  AMCAGAILHARIRRLIYAAADPKAGACGSALDVMNHPRLNHRMEVAVGLLAEECGEMLTS 143

Query: 144 FFKERR 149
           FF+ RR
Sbjct: 144 FFRTRR 149


>gi|315641449|ref|ZP_07896521.1| tRNA-specific adenosine deaminase [Enterococcus italicus DSM 15952]
 gi|315482737|gb|EFU73261.1| tRNA-specific adenosine deaminase [Enterococcus italicus DSM 15952]
          Length = 186

 Score =  107 bits (268), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 55/143 (38%), Positives = 78/143 (54%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  A+ EA+ A    E+P+GAV VL  +II R  N     +D T HAE++AIR  C  +
Sbjct: 30  FMCAAIGEAKKAQAIAEVPIGAVVVLEGEIIGRGHNLRETTQDATMHAEMIAIREACAKV 89

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  L+VTLEPC MC  A  L+R+  +Y+GA +PKGG   +     T    +H  
Sbjct: 90  GSWRLEDSQLFVTLEPCPMCGGAAMLSRVEEIYFGAYDPKGGATGSLLNLATDERFNHWS 149

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
            +  GI +     +++ FFKE R
Sbjct: 150 YVEAGILQAECSDLLRTFFKELR 172


>gi|152978402|ref|YP_001344031.1| CMP/dCMP deaminase zinc-binding [Actinobacillus succinogenes 130Z]
 gi|150840125|gb|ABR74096.1| CMP/dCMP deaminase zinc-binding [Actinobacillus succinogenes 130Z]
          Length = 182

 Score =  107 bits (268), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 62/144 (43%), Positives = 85/144 (59%), Gaps = 1/144 (0%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           FM+ AL  A  A +  EIPVGAV V  +N+II    N +    D TAHAEI+A+R G + 
Sbjct: 16  FMNHALALADKARMLGEIPVGAVLVDEHNQIIGEGWNLSIIHSDPTAHAEIVALRRGAQK 75

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           +    L    LYVTLEPCTMCA AI  +RI+RL +GA++ K G + +   F+     +H 
Sbjct: 76  IQNYRLLNCTLYVTLEPCTMCAGAILHSRIKRLVFGAADEKTGAVGSRFHFFEDYKMNHV 135

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
            E+  G+  ++  Q + DFFK RR
Sbjct: 136 IEVTGGVLAEKCGQKLSDFFKMRR 159


>gi|15605579|ref|NP_220365.1| cytosine deaminase [Chlamydia trachomatis D/UW-3/CX]
 gi|3329316|gb|AAC68441.1| cytosine deaminase [Chlamydia trachomatis D/UW-3/CX]
 gi|297748972|gb|ADI51518.1| tRNA-specific adenosine deaminase [Chlamydia trachomatis D-EC]
 gi|297749852|gb|ADI52530.1| tRNA-specific adenosine deaminase [Chlamydia trachomatis D-LC]
          Length = 163

 Score =  107 bits (268), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 58/149 (38%), Positives = 84/149 (56%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           ++K   FM  AL+EA+ A  ++E+PVG + V  +KII+R  N   +LKD T HAE++ I 
Sbjct: 3   IEKDLFFMKKALDEARKAYEQDEVPVGCIIVHGDKIIARGHNSVEQLKDPTVHAEMICIS 62

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
                L    L +  LY TLEPC MCA AI LARI R+ +GA + + G   +    +   
Sbjct: 63  AAAEYLENWRLKDTILYCTLEPCLMCAGAIQLARIPRIVWGAPDLRLGAGGSWLNVFLEK 122

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
              H  E   G+  Q S Q++++FF E+R
Sbjct: 123 HPFHQVECCSGVCYQESEQLMKNFFLEKR 151


>gi|326693434|ref|ZP_08230439.1| hypothetical protein LargK3_06881 [Leuconostoc argentinum KCTC
           3773]
          Length = 169

 Score =  107 bits (268), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 58/145 (40%), Positives = 80/145 (55%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           + FM  AL EA+ AA   E+P+GAV V +N+I++RA N     +  TAHAE+LAI     
Sbjct: 13  DYFMQVALNEAKLAATEGEVPIGAVIVKDNQIVARAHNHREAHQLATAHAELLAIEAAND 72

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
            L    L    L+VTLEPC MCA AI  AR+  +YYGA + KGG   +  Q       +H
Sbjct: 73  ALQSWRLENTALFVTLEPCIMCAGAIINARVPVVYYGADDAKGGATRSLYQLLEDERLNH 132

Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149
              ++P +       ++QDFF + R
Sbjct: 133 RVVVHPQVRGDEGGALLQDFFGQIR 157


>gi|37527198|ref|NP_930542.1| tRNA-specific adenosine deaminase [Photorhabdus luminescens subsp.
           laumondii TTO1]
 gi|36786632|emb|CAE15694.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii
           TTO1]
          Length = 173

 Score =  107 bits (268), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 60/143 (41%), Positives = 82/143 (57%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  A+E A  A  + EIPVGA+ V +NKIIS   N++    D TAHAEI+ +R G   L
Sbjct: 10  WMQQAIERAIKAWEQGEIPVGAILVADNKIISEGWNQSIIAHDPTAHAEIIVLRKGGERL 69

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L    LYVTLEPCTMCA A+  +RI+RL YGAS+ K G + +          +H  
Sbjct: 70  RNYRLINTTLYVTLEPCTMCAGAMIHSRIQRLVYGASDMKTGAVGSLVDILRHPGMNHQI 129

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           +I  G+  +    ++  FFK+RR
Sbjct: 130 DITSGVLAEECSTMLSAFFKQRR 152


>gi|309803507|ref|ZP_07697600.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Lactobacillus iners LactinV 11V1-d]
 gi|308164391|gb|EFO66645.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Lactobacillus iners LactinV 11V1-d]
          Length = 158

 Score =  107 bits (268), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 57/143 (39%), Positives = 82/143 (57%), Gaps = 1/143 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  A  EA  A  + EIP+GAV V     +I R  NR    +D T HAEI+AI+  C+ L
Sbjct: 11  MKLAFLEADKAEKQGEIPIGAVIVDAEGNLIGRGYNRRELDEDATRHAEIIAIQEACKNL 70

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
           +   L +  L+VTLEPC MCA AI  AR++ +YYGA +PK G   +    +     +H P
Sbjct: 71  NSWRLIDCSLFVTLEPCPMCAGAIINARLKNVYYGAFDPKAGACGSVVDLFAFTKFNHHP 130

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           +I+ G+  +++ Q ++ FFK  R
Sbjct: 131 QIFGGLYREQAAQQLKIFFKNIR 153


>gi|160885114|ref|ZP_02066117.1| hypothetical protein BACOVA_03112 [Bacteroides ovatus ATCC 8483]
 gi|237718265|ref|ZP_04548746.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
 gi|260174220|ref|ZP_05760632.1| putative cytosine/adenosine deaminase [Bacteroides sp. D2]
 gi|293368778|ref|ZP_06615382.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Bacteroides ovatus SD CMC 3f]
 gi|299147814|ref|ZP_07040877.1| cytidine/deoxycytidylate deaminase family protein [Bacteroides sp.
           3_1_23]
 gi|315922489|ref|ZP_07918729.1| conserved hypothetical protein [Bacteroides sp. D2]
 gi|156109464|gb|EDO11209.1| hypothetical protein BACOVA_03112 [Bacteroides ovatus ATCC 8483]
 gi|229452449|gb|EEO58240.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
 gi|292636083|gb|EFF54571.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Bacteroides ovatus SD CMC 3f]
 gi|298513997|gb|EFI37883.1| cytidine/deoxycytidylate deaminase family protein [Bacteroides sp.
           3_1_23]
 gi|313696364|gb|EFS33199.1| conserved hypothetical protein [Bacteroides sp. D2]
          Length = 145

 Score =  107 bits (268), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 59/143 (41%), Positives = 79/143 (55%), Gaps = 5/143 (3%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  AL EA  AA R E+PVGAV V   +II+RA N    L DVTAHAE+ AI     +L
Sbjct: 7   FMKQALIEAGKAAERGEVPVGAVVVCKERIIARAHNLTETLNDVTAHAEMQAITAAANVL 66

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
             + L E  LYVT+EPC MCA AI+ A+  +L +GA + K      G Q Y  +  H   
Sbjct: 67  GGKYLNECTLYVTVEPCVMCAGAIAWAQTGKLVFGAEDEK-----RGYQKYAGSALHPKT 121

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
            +  G+       ++++FF  +R
Sbjct: 122 VVVKGVMADECATLMKEFFAAKR 144


>gi|307565958|ref|ZP_07628417.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Prevotella amnii CRIS 21A-A]
 gi|307345386|gb|EFN90764.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Prevotella amnii CRIS 21A-A]
          Length = 156

 Score =  107 bits (268), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 59/149 (39%), Positives = 83/149 (55%), Gaps = 5/149 (3%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +KK   +M  ALEEA+ A    EIP+GA+ V  ++II+RA N    L DVTAHAE+ AI 
Sbjct: 13  IKKDLYYMQFALEEAKQAYKEKEIPIGAIIVCKDRIIARAHNLTERLHDVTAHAEMQAIT 72

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
           +    L  + L    LYVT+EPC MCA A+  ++++R+ +G  + K      G   Y   
Sbjct: 73  IAANELGGKYLEGCTLYVTVEPCIMCAGALGWSQMKRIVFGCIDDK-----RGYHTYAPK 127

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             H    I  GI E   ++++  FFKERR
Sbjct: 128 ALHPKANIIGGIMENECKELMLRFFKERR 156


>gi|329921024|ref|ZP_08277552.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Lactobacillus iners SPIN 1401G]
 gi|328935300|gb|EGG31780.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Lactobacillus iners SPIN 1401G]
          Length = 158

 Score =  107 bits (268), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 57/143 (39%), Positives = 82/143 (57%), Gaps = 1/143 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  A  EA  A  + EIP+GAV V     +I R  NR    +D T HAEI+AI+  C+ L
Sbjct: 11  MKLAFLEADKAEQQGEIPIGAVIVDAEGNLIGRGYNRRELDEDATRHAEIIAIQEACKNL 70

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
           +   L +  L+VTLEPC MCA AI  AR++ +YYGA +PK G   +    +     +H P
Sbjct: 71  NSWRLIDCSLFVTLEPCPMCAGAIINARLKNVYYGAFDPKAGACGSVVDLFAFTKFNHHP 130

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           +I+ G+  +++ Q ++ FFK  R
Sbjct: 131 QIFGGLYREQAAQQLKIFFKNIR 153


>gi|332292166|ref|YP_004430775.1| CMP/dCMP deaminase zinc-binding protein [Krokinobacter diaphorus
           4H-3-7-5]
 gi|332170252|gb|AEE19507.1| CMP/dCMP deaminase zinc-binding protein [Krokinobacter diaphorus
           4H-3-7-5]
          Length = 149

 Score =  107 bits (268), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 60/143 (41%), Positives = 82/143 (57%), Gaps = 6/143 (4%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  AL+EAQ A  + EIPVGAV V++N II+RA N    L DVTAHAE+ AI      +
Sbjct: 10  FMKKALQEAQAAFDQGEIPVGAVVVIDNMIIARAHNLTERLTDVTAHAEMQAITSASNFI 69

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
             + L +  LYVTLEPC MCA A+  ++I R+ YGA + + G    GT        H   
Sbjct: 70  GGKYLQQCTLYVTLEPCQMCAGALYWSQIGRIVYGAKDLRRGYDVMGT------ILHPKT 123

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           ++  G+  Q    I++ FF ++R
Sbjct: 124 KVESGVLAQECESIMKRFFVDKR 146


>gi|171463305|ref|YP_001797418.1| CMP/dCMP deaminase zinc-binding [Polynucleobacter necessarius
           subsp. necessarius STIR1]
 gi|171192843|gb|ACB43804.1| CMP/dCMP deaminase zinc-binding [Polynucleobacter necessarius
           subsp. necessarius STIR1]
          Length = 152

 Score =  107 bits (268), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 56/143 (39%), Positives = 83/143 (58%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  A+E+AQ AA   E+PVGAV V + ++I++A N+     D +AHAE+LA+R      
Sbjct: 10  YMRMAIEQAQLAAQAGEVPVGAVLVKDGQVIAKAFNKPIANHDPSAHAEMLALREAALAQ 69

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               +P   LYVTLEPC MC+ A+  ARI R+ +GA +PK G   +    +     +H  
Sbjct: 70  ENYRIPGSTLYVTLEPCAMCSGAMLHARIDRVVFGAPDPKTGAAGSVLDLFASKQINHQT 129

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
            +  GI  +   Q+++DFFK RR
Sbjct: 130 SVEGGIMSEECGQLLRDFFKRRR 152


>gi|153808687|ref|ZP_01961355.1| hypothetical protein BACCAC_02986 [Bacteroides caccae ATCC 43185]
 gi|149128513|gb|EDM19731.1| hypothetical protein BACCAC_02986 [Bacteroides caccae ATCC 43185]
          Length = 145

 Score =  107 bits (268), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 61/149 (40%), Positives = 79/149 (53%), Gaps = 5/149 (3%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M     FM  AL EA  AA R E+PVGAV V   +II+RA N    L DVTAHAE+ AI 
Sbjct: 1   MLDDTYFMKQALIEAGKAAERGEVPVGAVVVCKERIIARAHNLTETLNDVTAHAEMQAIT 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
               +L  + L E  LYVT+EPC MCA AI+ A+  +L +GA + K      G Q Y   
Sbjct: 61  AAANVLGGKYLSECTLYVTVEPCVMCAGAIAWAQTGKLVFGAEDEK-----RGYQRYAAD 115

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             H    +  GI       ++++FF  +R
Sbjct: 116 ALHPKTVVVKGILADECAALMREFFAAKR 144


>gi|162446945|ref|YP_001620077.1| Zn dependent nucleoside deaminase [Acholeplasma laidlawii PG-8A]
 gi|161985052|gb|ABX80701.1| probable Zn dependent nucleoside deaminase [Acholeplasma laidlawii
           PG-8A]
          Length = 146

 Score =  107 bits (267), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 53/106 (50%), Positives = 71/106 (66%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM+ AL+EA+ A  ++E+PVGAV VL+ KII+RA N     + + AHAE LAI    + +
Sbjct: 9   FMNEALKEAKKANDKDEVPVGAVVVLDGKIIARAHNLRESRQSIHAHAEFLAIEKAAKKI 68

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN 112
               L   D+YVTLEPC MCA A+  ARI+ LYYGA +PK G +E+
Sbjct: 69  GSWRLENADVYVTLEPCPMCAGAMIQARIKNLYYGAKDPKTGAVES 114


>gi|188584656|ref|YP_001916201.1| tRNA-adenosine deaminase [Natranaerobius thermophilus JW/NM-WN-LF]
 gi|179349343|gb|ACB83613.1| tRNA-adenosine deaminase [Natranaerobius thermophilus JW/NM-WN-LF]
          Length = 158

 Score =  107 bits (267), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 54/143 (37%), Positives = 85/143 (59%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  A+++A+ A  + E+P+GAV V + ++I+   N+    +D T+HAEI+AI+  C  L
Sbjct: 11  WMQQAIDQAKLAYNKGEVPIGAVIVKDEQLIATGFNKRETSQDATSHAEIIAIQSACNYL 70

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  LYVT+EPC MCA AI  +RI +L +G  +PK  G  + +Q       +H  
Sbjct: 71  GGWRLLDCTLYVTIEPCPMCAGAILQSRITKLVFGTEDPKAWGELSISQLLQNPQLNHQV 130

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           +I  GI ++ S+ II+ FF E R
Sbjct: 131 DIVEGICKEESKDIIKQFFHELR 153


>gi|49482788|ref|YP_040012.1| deaminase [Staphylococcus aureus subsp. aureus MRSA252]
 gi|257424672|ref|ZP_05601099.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           55/2053]
 gi|257427340|ref|ZP_05603739.1| tRNA-adenosine deaminase [Staphylococcus aureus subsp. aureus
           65-1322]
 gi|257429977|ref|ZP_05606361.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           68-397]
 gi|257432678|ref|ZP_05609038.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           E1410]
 gi|257435582|ref|ZP_05611630.1| tRNA-adenosine deaminase [Staphylococcus aureus subsp. aureus M876]
 gi|282903146|ref|ZP_06311037.1| cytidine/deoxycytidylate deaminase family protein [Staphylococcus
           aureus subsp. aureus C160]
 gi|282904936|ref|ZP_06312794.1| tRNA-adenosine deaminase [Staphylococcus aureus subsp. aureus
           Btn1260]
 gi|282907886|ref|ZP_06315721.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus
           WW2703/97]
 gi|282910199|ref|ZP_06318003.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus
           WBG10049]
 gi|282913391|ref|ZP_06321180.1| cytidine/deoxycytidylate deaminase family protein [Staphylococcus
           aureus subsp. aureus M899]
 gi|282923308|ref|ZP_06330988.1| tRNA-adenosine deaminase [Staphylococcus aureus subsp. aureus C101]
 gi|283957356|ref|ZP_06374809.1| cytidine/deoxycytidylate deaminase family protein [Staphylococcus
           aureus subsp. aureus A017934/97]
 gi|293500437|ref|ZP_06666288.1| tRNA-adenosine deaminase [Staphylococcus aureus subsp. aureus
           58-424]
 gi|293509382|ref|ZP_06668093.1| tRNA-adenosine deaminase [Staphylococcus aureus subsp. aureus M809]
 gi|293523969|ref|ZP_06670656.1| cytidine/deoxycytidylate deaminase family protein [Staphylococcus
           aureus subsp. aureus M1015]
 gi|295427097|ref|ZP_06819733.1| tRNA-adenosine deaminase [Staphylococcus aureus subsp. aureus
           EMRSA16]
 gi|297590551|ref|ZP_06949190.1| tRNA-specific adenosine deaminase [Staphylococcus aureus subsp.
           aureus MN8]
 gi|49240917|emb|CAG39584.1| putative deaminase [Staphylococcus aureus subsp. aureus MRSA252]
 gi|257272242|gb|EEV04365.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           55/2053]
 gi|257275533|gb|EEV07006.1| tRNA-adenosine deaminase [Staphylococcus aureus subsp. aureus
           65-1322]
 gi|257279174|gb|EEV09775.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           68-397]
 gi|257282093|gb|EEV12228.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           E1410]
 gi|257284773|gb|EEV14892.1| tRNA-adenosine deaminase [Staphylococcus aureus subsp. aureus M876]
 gi|282314176|gb|EFB44566.1| tRNA-adenosine deaminase [Staphylococcus aureus subsp. aureus C101]
 gi|282322423|gb|EFB52745.1| cytidine/deoxycytidylate deaminase family protein [Staphylococcus
           aureus subsp. aureus M899]
 gi|282325591|gb|EFB55899.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus
           WBG10049]
 gi|282328270|gb|EFB58548.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus
           WW2703/97]
 gi|282331761|gb|EFB61272.1| tRNA-adenosine deaminase [Staphylococcus aureus subsp. aureus
           Btn1260]
 gi|282596101|gb|EFC01062.1| cytidine/deoxycytidylate deaminase family protein [Staphylococcus
           aureus subsp. aureus C160]
 gi|283790807|gb|EFC29622.1| cytidine/deoxycytidylate deaminase family protein [Staphylococcus
           aureus subsp. aureus A017934/97]
 gi|290920932|gb|EFD97993.1| cytidine/deoxycytidylate deaminase family protein [Staphylococcus
           aureus subsp. aureus M1015]
 gi|291095442|gb|EFE25703.1| tRNA-adenosine deaminase [Staphylococcus aureus subsp. aureus
           58-424]
 gi|291467479|gb|EFF09994.1| tRNA-adenosine deaminase [Staphylococcus aureus subsp. aureus M809]
 gi|295128885|gb|EFG58515.1| tRNA-adenosine deaminase [Staphylococcus aureus subsp. aureus
           EMRSA16]
 gi|297576850|gb|EFH95565.1| tRNA-specific adenosine deaminase [Staphylococcus aureus subsp.
           aureus MN8]
 gi|312439022|gb|ADQ78093.1| tRNA-specific adenosine deaminase [Staphylococcus aureus subsp.
           aureus TCH60]
 gi|315193922|gb|EFU24316.1| putative deaminase [Staphylococcus aureus subsp. aureus CGS00]
          Length = 156

 Score =  107 bits (267), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 54/143 (37%), Positives = 83/143 (58%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM+ A+EEA+ AA   E+P+GA+   ++++I+RA N    L+  TAHAE +AI    ++L
Sbjct: 7   FMTLAIEEAKKAAQLGEVPIGAIITKDDEVIARAHNLRETLQQPTAHAEHIAIERAAKVL 66

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  LYVTLEPC MCA  I ++RI R+ YGA +PKGG   +       +  +H  
Sbjct: 67  GSWRLEDCTLYVTLEPCVMCAGTIVMSRIPRVVYGADDPKGGCSGSLMNLLQQSNFNHRA 126

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
            +  G+ ++    ++  FFK  R
Sbjct: 127 IVDKGVLKEACSTLLTTFFKNLR 149


>gi|327463521|gb|EGF09840.1| tRNA-specific adenosine deaminase [Streptococcus sanguinis SK1057]
 gi|327467872|gb|EGF13362.1| tRNA-specific adenosine deaminase [Streptococcus sanguinis SK330]
          Length = 156

 Score =  107 bits (267), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 59/149 (39%), Positives = 85/149 (57%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +++   FM  AL+EA+ A   +EIP+G V V   KII R  N   EL+    HAEI+AI 
Sbjct: 6   IEEKEAFMREALKEAEIALAHDEIPIGCVLVKEGKIIGRGHNAREELQRAVMHAEIMAIE 65

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              R  +   L +  L+VT+EPC MC+ AI LARI  + YGA+N K G   +     T  
Sbjct: 66  EANRHENSWRLLDTTLFVTIEPCVMCSGAIGLARIPHVVYGAANQKFGAAGSLYDILTDE 125

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  E+  G+ ++   QI+Q+FF++RR
Sbjct: 126 RLNHRVEVETGVLQEECAQIMQEFFRQRR 154


>gi|254361249|ref|ZP_04977392.1| cytosine deaminase [Mannheimia haemolytica PHL213]
 gi|153092745|gb|EDN73788.1| cytosine deaminase [Mannheimia haemolytica PHL213]
          Length = 174

 Score =  107 bits (267), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 62/144 (43%), Positives = 84/144 (58%), Gaps = 1/144 (0%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           FM  AL+ A  A  + EIPVGAV V  N +II R  N+  +L D +AHAE+ AIR   + 
Sbjct: 21  FMQYALDLADLAEAKGEIPVGAVLVDKNQQIIGRGWNQTIQLCDPSAHAEMQAIRQAGQT 80

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           L    L +  LYVTLEPC MCA AI  +RI+RL +GAS+ K G + +    +     +H 
Sbjct: 81  LGNYRLLDCTLYVTLEPCPMCAGAILHSRIKRLVFGASDYKTGAVGSRYHLFEDYKMNHF 140

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
            E++  +  +   Q I DFFK+RR
Sbjct: 141 LEVHGNVLGRECSQKISDFFKQRR 164


>gi|323142068|ref|ZP_08076916.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Phascolarctobacterium sp. YIT 12067]
 gi|322413455|gb|EFY04326.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Phascolarctobacterium sp. YIT 12067]
          Length = 166

 Score =  107 bits (267), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 58/145 (40%), Positives = 81/145 (55%), Gaps = 2/145 (1%)

Query: 7   FMSCALEEAQNAALRNEIPVGAV--AVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           +M  AL EA+ AA   EIP+GAV   +   ++I+ A N      D TAHAE++ IR  C 
Sbjct: 6   YMQLALAEARKAAELGEIPIGAVLADMTTGEVIAAAHNMRETWHDATAHAEVIVIREACE 65

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
            L +  L    LYVT+EPC MC+ AI   R+ R+ YG  + K GG E+     T    +H
Sbjct: 66  RLGRWRLSGCALYVTVEPCPMCSGAIVNGRVDRVVYGCHDVKAGGAESIFNIITNPNLNH 125

Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149
             E+  GI E+   Q+++DFF+ RR
Sbjct: 126 CAEVISGICEEECAQVMRDFFRRRR 150


>gi|125718966|ref|YP_001036099.1| hypothetical protein SSA_2184 [Streptococcus sanguinis SK36]
 gi|125498883|gb|ABN45549.1| Conserved hypothetical protein [Streptococcus sanguinis SK36]
          Length = 156

 Score =  107 bits (267), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 59/149 (39%), Positives = 85/149 (57%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +++   FM  AL+EA+ A   +EIP+G V V   KII R  N   EL+    HAEI+AI 
Sbjct: 6   IEEKEAFMREALKEAEIALAHDEIPIGCVLVKEGKIIGRGHNAREELQRAVMHAEIMAIE 65

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              R  +   L +  L+VT+EPC MC+ AI LARI  + YGA+N K G   +     T  
Sbjct: 66  EANRHENSWRLLDTTLFVTIEPCVMCSGAIGLARIPHVVYGAANQKFGAAGSLYDILTDE 125

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  E+  G+ ++   QI+Q+FF++RR
Sbjct: 126 RLNHRVEVEAGVLQEECAQIMQEFFRQRR 154


>gi|160882011|ref|YP_001560979.1| CMP/dCMP deaminase zinc-binding [Clostridium phytofermentans ISDg]
 gi|160430677|gb|ABX44240.1| CMP/dCMP deaminase zinc-binding [Clostridium phytofermentans ISDg]
          Length = 161

 Score =  107 bits (267), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 54/139 (38%), Positives = 80/139 (57%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  A+ +A+ AAL  E+P+G V V +NKII+R  N+    K   AHAEILAI    R L
Sbjct: 7   YMKAAIVQAKKAALIGEVPIGCVIVYDNKIIARGYNKRNTKKTTLAHAEILAIEKASRYL 66

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
           +   L    +YVTLEPC MC+ AI  +R+ R+  G+ NPK G   +      +   +H  
Sbjct: 67  NDWRLEGCTMYVTLEPCQMCSGAIVQSRMDRVVIGSMNPKAGCAGSILNLLQMEQFNHQV 126

Query: 127 EIYPGISEQRSRQIIQDFF 145
           E+  G+ ++   +++QDFF
Sbjct: 127 ELETGVMQEECTKLLQDFF 145


>gi|325295641|ref|YP_004282155.1| CMP/dCMP deaminase zinc-binding protein [Desulfurobacterium
           thermolithotrophum DSM 11699]
 gi|325066089|gb|ADY74096.1| CMP/dCMP deaminase zinc-binding protein [Desulfurobacterium
           thermolithotrophum DSM 11699]
          Length = 155

 Score =  107 bits (267), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 60/149 (40%), Positives = 88/149 (59%), Gaps = 1/149 (0%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M+  ++F+  AL+EA+ A    E+P+GA+ V + KIISRA NR   L+D TAHAE+LAI+
Sbjct: 1   MELDHLFLLEALKEAKKAFKLGEVPIGAIIVKDRKIISRAFNRKEFLQDPTAHAELLAIK 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              R L+   L    LY T+EPC MC   I  +RI RL Y   +PK GGIE+    +   
Sbjct: 61  EASRKLNSWRLNGCTLYSTVEPCIMCCGVIIQSRIDRLVYSVPDPKFGGIESLYTIFKDK 120

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  E+   I  + + +++++FFK  R
Sbjct: 121 KVNHRLEV-KKIYIKEAEELLKEFFKALR 148


>gi|163782336|ref|ZP_02177334.1| hypothetical protein HG1285_06100 [Hydrogenivirga sp. 128-5-R1-1]
 gi|159882369|gb|EDP75875.1| hypothetical protein HG1285_06100 [Hydrogenivirga sp. 128-5-R1-1]
          Length = 147

 Score =  107 bits (267), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 60/149 (40%), Positives = 86/149 (57%), Gaps = 9/149 (6%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
            VF+  AL+EA+ A    E+PVG V V    +++RA NR  ELKD +AHAE+LA+R   +
Sbjct: 3   EVFLKEALKEAERAYALGEVPVGCVVVKGGNVLARAHNRTEELKDASAHAELLALREAAK 62

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC-- 122
           +L    L   +LYVTLEPC MCA A+ L R+ R+ +G  + K GG+      Y+L     
Sbjct: 63  VLGDWRLEGCELYVTLEPCVMCAYALILFRVDRVVFGTPDRKHGGV---MSLYSLLDDER 119

Query: 123 --HHSPEIYPGISEQRSRQIIQDFFKERR 149
             H    +Y    E    +++++FFKERR
Sbjct: 120 FNHRVKWVYEPCEE--CGRLLREFFKERR 146


>gi|308187798|ref|YP_003931929.1| tRNA-specific adenosine deaminase [Pantoea vagans C9-1]
 gi|308058308|gb|ADO10480.1| tRNA-specific adenosine deaminase [Pantoea vagans C9-1]
          Length = 163

 Score =  107 bits (267), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 57/148 (38%), Positives = 83/148 (56%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           ++   +M  AL  A+ A  + E+PVGAV V N+++I    NR     D TAHAEI+A+R 
Sbjct: 3   QQDEYWMRHALSLARRAWEQGEVPVGAVLVQNDRVIGEGWNRPIGQHDPTAHAEIMALRQ 62

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
           G ++L    L +  LYVTLEPC MCA A+  +RI RL YGA + K G   +         
Sbjct: 63  GGKVLENYRLLDTTLYVTLEPCVMCAGAMVHSRISRLVYGAHDIKSGAAGSLLDVLGHPG 122

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H  E++ G+  +    ++ DFF+ RR
Sbjct: 123 MNHQVELHSGVLAEECAAMLSDFFRMRR 150


>gi|283778333|ref|YP_003369088.1| CMP/dCMP deaminase zinc-binding protein [Pirellula staleyi DSM
           6068]
 gi|283436786|gb|ADB15228.1| CMP/dCMP deaminase zinc-binding protein [Pirellula staleyi DSM
           6068]
          Length = 155

 Score =  107 bits (267), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 56/145 (38%), Positives = 84/145 (57%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           + +M  AL EA  A   +E+PVGAV V + ++I+ A N+   L D TAHAE++AI     
Sbjct: 6   DYYMQLALNEASAAFDEDEVPVGAVIVHSGRVIAAAHNQREALHDPTAHAEMIAITQAAE 65

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
            +    L    LYVTLEPC MC+ AI  AR+  + YGA++PK G + +     T    +H
Sbjct: 66  SMGDWRLEGCTLYVTLEPCIMCSGAILQARVPTVVYGATDPKAGAVGSLFHLLTDERLNH 125

Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149
             ++ PGI  + S +I+  FF+++R
Sbjct: 126 RCQVVPGILAKPSGEILTRFFQQQR 150


>gi|295702259|ref|YP_003595334.1| tRNA-specific adenosine deaminase [Bacillus megaterium DSM 319]
 gi|294799918|gb|ADF36984.1| tRNA-specific adenosine deaminase [Bacillus megaterium DSM 319]
          Length = 156

 Score =  107 bits (266), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 54/143 (37%), Positives = 82/143 (57%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  A++EA  A  + E+P+GAV V N+++++ A N     +   AHAE+LAI   C+ L
Sbjct: 7   YMRLAIDEALKAKDKLEVPIGAVIVQNDEVVASAYNLRETEQRSVAHAELLAIDEACKKL 66

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  LYVTLEPC MCA AI L+R++R+ +GA +PKGG              +H  
Sbjct: 67  RTWRLEDATLYVTLEPCPMCAGAIVLSRVKRVVFGAYDPKGGCAGTLLNLLKFEKFNHQA 126

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+  G+ E+    ++  FF+E R
Sbjct: 127 EVVGGMLEEECGSLLTTFFRELR 149


>gi|260886684|ref|ZP_05897947.1| tRNA-specific adenosine deaminase [Selenomonas sputigena ATCC
           35185]
 gi|330839487|ref|YP_004414067.1| CMP/dCMP deaminase zinc-binding protein [Selenomonas sputigena ATCC
           35185]
 gi|260863536|gb|EEX78036.1| tRNA-specific adenosine deaminase [Selenomonas sputigena ATCC
           35185]
 gi|329747251|gb|AEC00608.1| CMP/dCMP deaminase zinc-binding protein [Selenomonas sputigena ATCC
           35185]
          Length = 168

 Score =  107 bits (266), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 57/144 (39%), Positives = 84/144 (58%), Gaps = 1/144 (0%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           FM  AL+EAQ A    E+P+GAV V  +  +++RA N      D TAHAEI+A++   R 
Sbjct: 7   FMKEALKEAQEAFQAGEVPIGAVLVDADGTVVARAHNMRETWHDGTAHAEIIALQEAARK 66

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           L +  L  + LYVT+EPC MCA A+ ++R+ R+ YGA++ K G  E+          +H 
Sbjct: 67  LGRWRLSGLTLYVTIEPCPMCAGALVMSRVDRVVYGATDAKAGACESLFNIVRHPALNHQ 126

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
            E+  G+ E   R I++ FF +RR
Sbjct: 127 LEMRAGVLEDECRAIMKRFFGQRR 150


>gi|327182903|gb|AEA31350.1| cytidine-deoxycytidylate deaminase [Lactobacillus amylovorus GRL
           1118]
          Length = 168

 Score =  107 bits (266), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 54/144 (37%), Positives = 84/144 (58%), Gaps = 1/144 (0%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           +M  A+ +A+ A  + E+P+GAV V  + K+I    NR    KD T HAE++AI+  C+ 
Sbjct: 10  YMQLAIAQAKEAEKQGEVPIGAVIVDPDGKVIGTGYNRRELDKDATQHAEMIAIKEACKN 69

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           L    L +  L+VTLEPC MCA AI  +RI+ +Y+GA +PK G   +    +T+   +H 
Sbjct: 70  LGMWRLIDCSLFVTLEPCPMCAGAIINSRIKDVYFGALDPKAGACGSVVDLFTVEKFNHH 129

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
           P    G+   +  Q+++DFF+  R
Sbjct: 130 PHAIRGLYRDQCAQMLKDFFRAIR 153


>gi|317493152|ref|ZP_07951575.1| cytidine and deoxycytidylate deaminase zinc-binding protein
           [Enterobacteriaceae bacterium 9_2_54FAA]
 gi|316918812|gb|EFV40148.1| cytidine and deoxycytidylate deaminase zinc-binding protein
           [Enterobacteriaceae bacterium 9_2_54FAA]
          Length = 170

 Score =  107 bits (266), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 57/143 (39%), Positives = 83/143 (58%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  AL  AQ A  + E+PVGA+ VL++++I +  NR     D TAHAEI+A++ G +I+
Sbjct: 9   WMKQALALAQKAWEQGEVPVGAILVLDDEVIGQGWNRPITRHDPTAHAEIMALQQGGQIV 68

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L    LYVTLEPC MCA A+  +RI+RL YGAS+ K G   +          +H  
Sbjct: 69  QNYRLLNATLYVTLEPCVMCAGAMVHSRIKRLVYGASDLKTGAAGSLLDVLRHPGMNHQI 128

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           EI  G+      +++  FF++RR
Sbjct: 129 EITAGVMANECSEMLSQFFQQRR 151


>gi|330936949|gb|EGH41059.1| cytidine/deoxycytidylate deaminase, zinc-binding region
           [Pseudomonas syringae pv. pisi str. 1704B]
          Length = 169

 Score =  107 bits (266), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 59/143 (41%), Positives = 81/143 (56%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  AL  A   AL  E+PVGAV V N +II R  N      D +AHAE++AIR   + L
Sbjct: 15  FMREALALASQGALLGEVPVGAVVVQNGEIIGRGYNCPISGSDPSAHAEMVAIRDAAKAL 74

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               LP   LYVTLEPC+MCA  I  +R+ R+ YGA  PK G +++  QF++ A  +H  
Sbjct: 75  DNYRLPGSTLYVTLEPCSMCAGLIVHSRVARVVYGALEPKAGIVQSQGQFFSQAFLNHRV 134

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
               G+  +    ++ +FF+ RR
Sbjct: 135 LFEGGVLGEECGTMLSEFFRMRR 157


>gi|238753915|ref|ZP_04615275.1| tRNA-specific adenosine deaminase [Yersinia ruckeri ATCC 29473]
 gi|238707903|gb|EEQ00261.1| tRNA-specific adenosine deaminase [Yersinia ruckeri ATCC 29473]
          Length = 171

 Score =  107 bits (266), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 61/143 (42%), Positives = 80/143 (55%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  ALE AQ A    E+PVGAV VL+N+ I    NR     D TAHAE++A+R G + L
Sbjct: 10  WMRQALELAQRAQEEGEVPVGAVLVLDNQAIGIGWNRPIVHHDPTAHAEMMALRQGGQAL 69

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L    LYVTLEPC MCA A+  +RIRRL YGA++ K G   +          +H  
Sbjct: 70  QNYRLLNATLYVTLEPCVMCAGAMVHSRIRRLVYGANDIKTGAAGSLLDILRHPGMNHQV 129

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           EI  G+  +   Q +  FF++RR
Sbjct: 130 EITAGVLAEECSQTLSTFFRQRR 152


>gi|146319707|ref|YP_001199419.1| cytosine/adenosine deaminase [Streptococcus suis 05ZYH33]
 gi|253752698|ref|YP_003025839.1| deaminase [Streptococcus suis SC84]
 gi|253754524|ref|YP_003027665.1| deaminase [Streptococcus suis P1/7]
 gi|253756457|ref|YP_003029597.1| deaminase [Streptococcus suis BM407]
 gi|145690513|gb|ABP91019.1| Cytosine/adenosine deaminase [Streptococcus suis 05ZYH33]
 gi|251816987|emb|CAZ52636.1| putative deaminase [Streptococcus suis SC84]
 gi|251818921|emb|CAZ56764.1| putative deaminase [Streptococcus suis BM407]
 gi|251820770|emb|CAR47532.1| putative deaminase [Streptococcus suis P1/7]
 gi|292559319|gb|ADE32320.1| Cytosine/adenosine deaminase [Streptococcus suis GZ1]
 gi|319759114|gb|ADV71056.1| cytosine/adenosine deaminase [Streptococcus suis JS14]
          Length = 173

 Score =  107 bits (266), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 56/143 (39%), Positives = 83/143 (58%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM+ AL+EA+ +  ++EIP+G V V + +II R  N   EL     HAE++AI+    + 
Sbjct: 11  FMTQALQEARKSLEKDEIPIGCVIVKDGQIIGRGHNAREELNQAIMHAEVMAIQEANNVE 70

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  L+VT+EPC MC+ AI LARI ++ YGA+N K G   +     T    +H  
Sbjct: 71  GNWRLLDSTLFVTIEPCVMCSGAIGLARIPQVIYGATNKKFGAAGSLYDILTDERLNHRV 130

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           ++  GI E     I+QDFF++RR
Sbjct: 131 KVETGILEAECANIMQDFFRQRR 153


>gi|53711997|ref|YP_097989.1| putative cytosine/adenosine deaminase [Bacteroides fragilis YCH46]
 gi|60680198|ref|YP_210342.1| cytosine deaminase [Bacteroides fragilis NCTC 9343]
 gi|253563968|ref|ZP_04841425.1| cytosine deaminase [Bacteroides sp. 3_2_5]
 gi|265765335|ref|ZP_06093610.1| ComE operon protein 2 [Bacteroides sp. 2_1_16]
 gi|52214862|dbj|BAD47455.1| putative cytosine/adenosine deaminase [Bacteroides fragilis YCH46]
 gi|60491632|emb|CAH06384.1| possible cytosine deaminase [Bacteroides fragilis NCTC 9343]
 gi|251947744|gb|EES88026.1| cytosine deaminase [Bacteroides sp. 3_2_5]
 gi|263254719|gb|EEZ26153.1| ComE operon protein 2 [Bacteroides sp. 2_1_16]
 gi|301161723|emb|CBW21263.1| possible cytosine deaminase [Bacteroides fragilis 638R]
          Length = 145

 Score =  107 bits (266), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 61/149 (40%), Positives = 79/149 (53%), Gaps = 5/149 (3%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M   + FM  AL EA  A  R E+PVGAV V   +II+RA N    L DVTAHAE+ AI 
Sbjct: 1   MLDDSYFMKQALIEAVKAGERGEVPVGAVVVCKERIIARAHNLTETLNDVTAHAEMQAIT 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
               +L  + L E  LYVT+EPC MCA AI+ A+  +L +GA + K      G Q Y   
Sbjct: 61  AAANVLGGKYLNECTLYVTVEPCVMCAGAIAWAQTGKLVFGAEDDK-----RGYQRYAPQ 115

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             H    +  GI       +++DFF  +R
Sbjct: 116 ALHPKTVVVKGILADECAGLMKDFFAAKR 144


>gi|330833669|ref|YP_004402494.1| cytosine/adenosine deaminase [Streptococcus suis ST3]
 gi|329307892|gb|AEB82308.1| cytosine/adenosine deaminase [Streptococcus suis ST3]
          Length = 173

 Score =  107 bits (266), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 56/143 (39%), Positives = 83/143 (58%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM+ AL+EA+ +  ++EIP+G V V + +II R  N   EL     HAE++AI+    + 
Sbjct: 11  FMTQALQEARKSLEKDEIPIGCVIVKDGQIIGRGHNAREELNQAIMHAEVMAIQEANNVE 70

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  L+VT+EPC MC+ AI LARI ++ YGA+N K G   +     T    +H  
Sbjct: 71  GNWRLLDSTLFVTIEPCVMCSGAIGLARIPQVIYGATNKKFGAAGSLYDILTDERLNHRV 130

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           ++  GI E     I+QDFF++RR
Sbjct: 131 KVETGILEAECANIMQDFFRQRR 153


>gi|224475714|ref|YP_002633320.1| putative deaminase [Staphylococcus carnosus subsp. carnosus TM300]
 gi|222420321|emb|CAL27135.1| putative deaminase [Staphylococcus carnosus subsp. carnosus TM300]
          Length = 159

 Score =  107 bits (266), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 56/143 (39%), Positives = 81/143 (56%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  ALEEA+ A    E+P+GA+ V   ++I+RA N    ++  TAHAE +AI      +
Sbjct: 7   YMKLALEEAKKAERIGEVPIGAIVVKEGEVIARAHNLRETVQQPTAHAEHIAIEKAAEAV 66

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  LYVTLEPC MC+ AI ++RI R+ YGAS+PKGG   +          +H  
Sbjct: 67  GSWRLEDCTLYVTLEPCVMCSGAIVMSRIPRVVYGASDPKGGCSGSLMDLLQEPRFNHRA 126

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+  G+ E     I++ FFK+ R
Sbjct: 127 EVVSGVLENECGAILKSFFKQLR 149


>gi|304558173|gb|ADM40837.1| tRNA-specific adenosine-34 deaminase [Edwardsiella tarda FL6-60]
          Length = 170

 Score =  107 bits (266), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 59/143 (41%), Positives = 81/143 (56%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  AL+ A+ A  + E+PVGAV VLN+++I    NR     D TAHAEI+A++ G  I+
Sbjct: 9   WMRHALQLAEKARAQGEVPVGAVLVLNDRVIGEGWNRPITRHDPTAHAEIMALQQGGAIM 68

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L E  LYVTLEPC MCA A+  +RIRRL YGA + K G   +          +H  
Sbjct: 69  QNYRLLEATLYVTLEPCVMCAGAMVHSRIRRLVYGAPDLKTGAAGSLLDVLGHPGMNHRI 128

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+  G+        + DFF++RR
Sbjct: 129 EVCGGVLADACAAQLSDFFRQRR 151


>gi|255007517|ref|ZP_05279643.1| cytosine deaminase [Bacteroides fragilis 3_1_12]
 gi|313145211|ref|ZP_07807404.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
 gi|313133978|gb|EFR51338.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
          Length = 145

 Score =  107 bits (266), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 60/149 (40%), Positives = 80/149 (53%), Gaps = 5/149 (3%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M   + FM  AL EA  A  R E+PVGAV V   +II+RA N    L DVTAHAE+ AI 
Sbjct: 1   MLDDSYFMKQALVEAAKAGERGEVPVGAVVVCKERIIARAHNLTETLNDVTAHAEMQAIT 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
               +L  + L E  LYVT+EPC MCA AI+ A+  +L +GA + K      G Q Y   
Sbjct: 61  AAANVLGGKYLNECTLYVTVEPCVMCAGAIAWAQTGKLVFGAEDEK-----RGYQRYAPK 115

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
           + H    +  GI       ++++FF  +R
Sbjct: 116 SLHPKTVVVKGILADECANLMKNFFASKR 144


>gi|78188173|ref|YP_378511.1| cytosine deaminase, putative [Chlorobium chlorochromatii CaD3]
 gi|78170372|gb|ABB27468.1| tRNA-adenosine deaminase [Chlorobium chlorochromatii CaD3]
          Length = 153

 Score =  107 bits (266), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 58/146 (39%), Positives = 82/146 (56%), Gaps = 1/146 (0%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNN-KIISRAGNRNRELKDVTAHAEILAIRMGC 63
           N FMS AL EA  A  + E+PVGAV + +N  II R  N+   L D TAHAE++A+    
Sbjct: 5   NTFMSAALREAIKAYEQREVPVGAVVLDSNGHIIGRGHNQVETLHDATAHAEMIALTAAM 64

Query: 64  RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123
             L  + L +  L VT+EPC MCA AI  A++ R+ +GA + K G              +
Sbjct: 65  ATLGNKYLDDCTLAVTMEPCPMCAGAIVNAKVGRVIFGAYDSKMGACGTVLNITGNRVLN 124

Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149
           H PE++ GI E + ++++Q FFK  R
Sbjct: 125 HQPEVFGGIMEHKCQELLQSFFKSLR 150


>gi|153952715|ref|YP_001393480.1| hypothetical protein CKL_0054 [Clostridium kluyveri DSM 555]
 gi|219853386|ref|YP_002470508.1| hypothetical protein CKR_0043 [Clostridium kluyveri NBRC 12016]
 gi|146345596|gb|EDK32132.1| TadA [Clostridium kluyveri DSM 555]
 gi|219567110|dbj|BAH05094.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 145

 Score =  107 bits (266), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 61/143 (42%), Positives = 79/143 (55%), Gaps = 1/143 (0%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  A+++A+ A    E+PVGAV V NN IISRA N    LKD TAHAEILAIR   +++
Sbjct: 4   FMFEAIKQAEMALQLGEVPVGAVVVKNNNIISRAYNLKETLKDSTAHAEILAIRSASKVV 63

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  +YVTLEPC MCA AI   RI RLY G  +P  G   +          +H  
Sbjct: 64  KNWRLKDCSMYVTLEPCPMCAGAILQCRISRLYIGTFDPVMGACGSVVNILQNNFLNHWI 123

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           +I   +       +++ FFK RR
Sbjct: 124 DI-QWLYNNECSNMLKKFFKNRR 145


>gi|324995886|gb|EGC27797.1| tRNA-specific adenosine deaminase [Streptococcus sanguinis SK678]
 gi|325695392|gb|EGD37292.1| tRNA-specific adenosine deaminase [Streptococcus sanguinis SK150]
 gi|327488579|gb|EGF20379.1| tRNA-specific adenosine deaminase [Streptococcus sanguinis SK1058]
 gi|328944679|gb|EGG38840.1| tRNA-specific adenosine deaminase [Streptococcus sanguinis SK1087]
          Length = 156

 Score =  107 bits (266), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 59/149 (39%), Positives = 85/149 (57%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +++   FM  AL+EA+ A   +EIP+G V V   KII R  N   EL+    HAEI+AI 
Sbjct: 6   IEEKEAFMREALKEAEIALAYDEIPIGCVLVKEGKIIGRGHNAREELQRAVMHAEIMAIE 65

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              R  +   L +  L+VT+EPC MC+ AI LARI  + YGA+N K G   +     T  
Sbjct: 66  EANRHENSWRLLDTTLFVTIEPCVMCSGAIGLARIPHVVYGAANQKFGAAGSLYDILTDE 125

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  E+  G+ ++   QI+Q+FF++RR
Sbjct: 126 RLNHRVEVETGVLQEECAQIMQEFFRQRR 154


>gi|300311527|ref|YP_003775619.1| cytosine/adenosine deaminases protein [Herbaspirillum seropedicae
           SmR1]
 gi|300074312|gb|ADJ63711.1| cytosine/adenosine deaminases protein [Herbaspirillum seropedicae
           SmR1]
          Length = 185

 Score =  107 bits (266), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 55/144 (38%), Positives = 83/144 (57%)

Query: 6   VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           + M  ALE+A++A    E+PVGAV V +  +I+   N+     D TAHAEI+A+R    I
Sbjct: 20  LHMRAALEQARHAWALGEVPVGAVVVKDGVVIATGFNQPIGKHDPTAHAEIMALRRAAEI 79

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           L    LP  +LYVTLEPC MC+ A+  AR+ R+ +GA++PK G   +    +     +H 
Sbjct: 80  LGNYRLPGCELYVTLEPCVMCSGAMMHARLARVVFGAADPKTGACGSVLNLFEQDQLNHH 139

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
             +  G+  +   Q+++DFF  RR
Sbjct: 140 TALLGGVMAEECGQLLKDFFAMRR 163


>gi|295102136|emb|CBK99681.1| tRNA-adenosine deaminase [Faecalibacterium prausnitzii L2-6]
          Length = 162

 Score =  107 bits (266), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 59/143 (41%), Positives = 83/143 (58%), Gaps = 1/143 (0%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
            M  ALEEA+ AA   E+PVGAV   + +IIS A N     K+   HAE+LAI   C+ L
Sbjct: 6   LMGAALEEARKAAALGEVPVGAVVAKDGEIISAAHNTRETEKNALHHAELLAIDAACKKL 65

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L + +L+VTLEPC MC+ AI  +RI+R+ YGA++ K G   + T  +     HH P
Sbjct: 66  GGWRLWQCELFVTLEPCPMCSGAIINSRIKRVVYGAADVKAGCCGSVTDLFAQPFNHH-P 124

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
            I  G+    ++Q++Q+FF   R
Sbjct: 125 VIEKGLRADEAQQLLQEFFVSLR 147


>gi|291482388|dbj|BAI83463.1| hypothetical protein BSNT_00036 [Bacillus subtilis subsp. natto
           BEST195]
          Length = 161

 Score =  107 bits (266), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 54/147 (36%), Positives = 84/147 (57%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M +  ++M  A++EA+ A  + E+P+GAV V+N++II+RA N     +   AHAE+L I 
Sbjct: 1   MTQDELYMKEAIKEAKKAEEKGEVPIGAVLVVNDEIIARAHNLRETEQRSIAHAEMLVID 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
             C+ L    L    LYVTLEPC MCA A+ L+R+ ++ +GA +PKGG            
Sbjct: 61  EACKALGTWRLEGATLYVTLEPCPMCAGAVVLSRVEKVVFGAFDPKGGCSGTLMNLLQEE 120

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKE 147
             +H  E+  G+ E+    ++  FF+E
Sbjct: 121 RFNHQAEVVSGVLEEECGGMLSAFFRE 147


>gi|104783359|ref|YP_609857.1| cytidine/deoxycytidylate deaminase [Pseudomonas entomophila L48]
 gi|95112346|emb|CAK17073.1| putative cytidine/deoxycytidylate deaminase [Pseudomonas
           entomophila L48]
          Length = 145

 Score =  106 bits (265), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 58/142 (40%), Positives = 80/142 (56%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  ALE A   A   E+PVGAV V + ++I +  NR     D +AHAE++AIR   +  S
Sbjct: 1   MRLALELAAQGAALGEVPVGAVLVQHGQVIGQGFNRPIIDSDPSAHAEMVAIRAAAKSAS 60

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
              LP   LYVTLEPC+MCA  I  +R+ R+ YGA  PK G +++  QF++    +H   
Sbjct: 61  NYRLPGSTLYVTLEPCSMCAGLIVHSRVARVVYGALEPKAGIVQSQGQFFSQGFLNHRVM 120

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
              G+  Q    I+ +FFK RR
Sbjct: 121 FEGGVLAQECGAILSEFFKARR 142


>gi|290476033|ref|YP_003468930.1| TadA, tRNA-specific adenosine deaminase [Xenorhabdus bovienii
           SS-2004]
 gi|289175363|emb|CBJ82166.1| TadA, tRNA-specific adenosine deaminase [Xenorhabdus bovienii
           SS-2004]
          Length = 169

 Score =  106 bits (265), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 63/143 (44%), Positives = 80/143 (55%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  A+E A  A  ++EIPVGAV V NNKII+   N      D TAHAEI+A+R G   L
Sbjct: 10  WMRRAMELAMQAQSQDEIPVGAVLVANNKIIAEGYNHPITEHDPTAHAEIIALRRGGIEL 69

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L    LYVTLEPC MCA A+  +RI+RL YGAS+ K G   +          +H  
Sbjct: 70  QNYRLLNTTLYVTLEPCVMCAGAMVHSRIQRLVYGASDMKTGAAGSLIDILRHPGMNHQI 129

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           EI  G+  Q    ++  FFK+RR
Sbjct: 130 EITAGVLAQECATMLSTFFKQRR 152


>gi|269138128|ref|YP_003294828.1| tRNA-specific adenosine deaminase [Edwardsiella tarda EIB202]
 gi|267983788|gb|ACY83617.1| tRNA-specific adenosine deaminase [Edwardsiella tarda EIB202]
          Length = 180

 Score =  106 bits (265), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 59/143 (41%), Positives = 81/143 (56%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  AL+ A+ A  + E+PVGAV VLN+++I    NR     D TAHAEI+A++ G  I+
Sbjct: 19  WMRHALQLAEKARAQGEVPVGAVLVLNDRVIGEGWNRPITRHDPTAHAEIMALQQGGAIM 78

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L E  LYVTLEPC MCA A+  +RIRRL YGA + K G   +          +H  
Sbjct: 79  QNYRLLEATLYVTLEPCVMCAGAMVHSRIRRLVYGAPDLKTGAAGSLLDVLGHPGMNHRI 138

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+  G+        + DFF++RR
Sbjct: 139 EVCGGVLADACAAQLSDFFRQRR 161


>gi|296276694|ref|ZP_06859201.1| putative tRNA-specific adenosine deaminase [Staphylococcus aureus
           subsp. aureus MR1]
          Length = 156

 Score =  106 bits (265), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 54/143 (37%), Positives = 82/143 (57%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM+ A+EEA+ AA   E+P+GA+   ++++I+RA N    L+  TAHAE +AI    ++L
Sbjct: 7   FMTLAIEEAKKAAQLGEVPIGAIITKDDEVIARAHNLRETLQQPTAHAEHIAIERAAKVL 66

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L    LYVTLEPC MCA  I ++RI R+ YGA +PKGG   +       +  +H  
Sbjct: 67  GSWRLEGCTLYVTLEPCVMCAGTIVMSRIPRVVYGADDPKGGCSSSLMNLLQQSNFNHRA 126

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
            +  G+ ++    ++  FFK  R
Sbjct: 127 IVDKGVLKEACSTLLTTFFKNLR 149


>gi|317475163|ref|ZP_07934430.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Bacteroides eggerthii 1_2_48FAA]
 gi|316908616|gb|EFV30303.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Bacteroides eggerthii 1_2_48FAA]
          Length = 144

 Score =  106 bits (265), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 59/145 (40%), Positives = 79/145 (54%), Gaps = 5/145 (3%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           N +M  AL EAQ A  R E+PVGAV V  +++I+RA N    L DVTAHAE+ AI     
Sbjct: 4   NYYMKQALLEAQKAGDRGEVPVGAVVVCKDRVIARAHNLTETLTDVTAHAEMQAITAAAS 63

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
            L  + L E  LYVT+EPC MCA AI+ A+  RL +GA + K      G Q Y     H 
Sbjct: 64  TLGGKYLNECTLYVTVEPCVMCAGAIAWAQTGRLVFGAEDEK-----RGYQRYAPHALHP 118

Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149
              +  G+       ++++FF  +R
Sbjct: 119 KTVVVKGVLGDECAALMKNFFAGKR 143


>gi|332365217|gb|EGJ42980.1| tRNA-specific adenosine deaminase [Streptococcus sanguinis SK1059]
          Length = 179

 Score =  106 bits (265), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 59/149 (39%), Positives = 85/149 (57%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +++   FM  AL+EA+ A   +EIP+G V V   KII R  N   EL+    HAEI+AI 
Sbjct: 29  IEEKEAFMREALKEAEIALAHDEIPIGCVLVKEGKIIGRGHNAREELQRAVMHAEIMAIE 88

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              R  +   L +  L+VT+EPC MC+ AI LARI  + YGA+N K G   +     T  
Sbjct: 89  EANRHENSWRLLDTTLFVTIEPCVMCSGAIGLARIPHVVYGAANQKFGAAGSLYDILTDE 148

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  E+  G+ ++   QI+Q+FF++RR
Sbjct: 149 RLNHRVEVEIGVLQEECAQIMQEFFRQRR 177


>gi|313124289|ref|YP_004034548.1| nucleoside deaminase [Lactobacillus delbrueckii subsp. bulgaricus
           ND02]
 gi|312280852|gb|ADQ61571.1| Nucleoside deaminase [Lactobacillus delbrueckii subsp. bulgaricus
           ND02]
          Length = 169

 Score =  106 bits (265), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 52/130 (40%), Positives = 82/130 (63%), Gaps = 1/130 (0%)

Query: 21  RNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVT 79
           ++E+P+GAV V  + +II R  NR    +D TAHAEILAI+  C+ L    L +  L+VT
Sbjct: 24  QDEVPIGAVVVGPDGQIIGRGYNRRELDEDGTAHAEILAIKEACQKLDSWRLIDCSLFVT 83

Query: 80  LEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139
           LEPC MCA AI  +RI+ +Y+ A +PK G   +    +++   +H PE+  G+ +++   
Sbjct: 84  LEPCAMCAGAIINSRIKEVYFAAMDPKAGAAGSVVDLFSVEKFNHHPEVIRGLYKEQGAL 143

Query: 140 IIQDFFKERR 149
           +++DFF+E R
Sbjct: 144 LLKDFFREIR 153


>gi|329768262|ref|ZP_08259763.1| hypothetical protein HMPREF0428_01460 [Gemella haemolysans M341]
 gi|328837461|gb|EGF87090.1| hypothetical protein HMPREF0428_01460 [Gemella haemolysans M341]
          Length = 155

 Score =  106 bits (265), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 55/149 (36%), Positives = 84/149 (56%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           MK  + +M  ALEEA+ A  + E+P+GAV V++ ++I++A N   E +    HAE+LAI+
Sbjct: 1   MKDHSYYMEMALEEARRAYAKGEVPIGAVLVVDGEVIAKAHNTREEHQQALNHAEMLAIK 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
             C       L    LY T+EPC MC+ AI  AR+  + YGAS+PK G   +        
Sbjct: 61  EACEKQGFWRLDNSYLYTTVEPCVMCSGAIVQARVENVIYGASDPKYGCCGSCIDLVGEN 120

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  E+  G+ E+    ++++FFKE R
Sbjct: 121 KFNHQAEVISGVLEEECSMLMKNFFKELR 149


>gi|255320509|ref|ZP_05361690.1| tRNA-specific adenosine deaminase [Acinetobacter radioresistens
           SK82]
 gi|262378401|ref|ZP_06071558.1| conserved hypothetical protein [Acinetobacter radioresistens SH164]
 gi|255302481|gb|EET81717.1| tRNA-specific adenosine deaminase [Acinetobacter radioresistens
           SK82]
 gi|262299686|gb|EEY87598.1| conserved hypothetical protein [Acinetobacter radioresistens SH164]
          Length = 163

 Score =  106 bits (265), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 57/146 (39%), Positives = 85/146 (58%), Gaps = 1/146 (0%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           + +M  A E+A  AA + E+PVGAV V NN++I    N+     D TAHAEI A+R  C+
Sbjct: 9   HYWMQLAYEQAALAASKGEVPVGAVIVSNNQVIGVGHNQPIFKHDPTAHAEIQALREACQ 68

Query: 65  ILSQEILPE-VDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123
           +     LP+   LYVTLEPCTMC  A+  AR++R+ +GA+ PK G + +  +       +
Sbjct: 69  LTQNYRLPDDTTLYVTLEPCTMCVGALIHARVQRVVFGATEPKAGSLVSARRLLESGYYN 128

Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149
           H  +   G  +++  Q + DFF+ RR
Sbjct: 129 HLFQFESGCLQEQCSQQLSDFFRMRR 154


>gi|86160056|ref|YP_466841.1| tRNA-adenosine deaminase [Anaeromyxobacter dehalogenans 2CP-C]
 gi|85776567|gb|ABC83404.1| tRNA-adenosine deaminase [Anaeromyxobacter dehalogenans 2CP-C]
          Length = 160

 Score =  106 bits (265), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 58/138 (42%), Positives = 79/138 (57%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  AL  A+ AA R E+PVGAVA+   +++ R  N     +D TAHAE+LAI+   R L 
Sbjct: 7   MQEALGLAREAAARGEVPVGAVALFEGRVVGRGANAREAARDPTAHAELLAIQEAARTLG 66

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
           +  L  V L VTLEPC MCA A+ LARI RL YGAS+PK G   +          +H   
Sbjct: 67  RWRLTGVTLVVTLEPCAMCAGAMVLARIDRLVYGASDPKAGCTGSLQDLSADPRLNHRFP 126

Query: 128 IYPGISEQRSRQIIQDFF 145
           +  G+  + S ++++ FF
Sbjct: 127 VERGLLAEESGELLRAFF 144


>gi|268611568|ref|ZP_06145295.1| cytosine/adenosine deaminase [Ruminococcus flavefaciens FD-1]
          Length = 153

 Score =  106 bits (265), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 62/145 (42%), Positives = 82/145 (56%), Gaps = 3/145 (2%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           +M  ALE A+ A    E+PVGAV V     +I+    NR    K+  AHAEI AI   CR
Sbjct: 4   YMKRALELAREAFDEGEVPVGAVVVKKTTGEIVGEGRNRRETAKNALAHAEIEAIDQACR 63

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
            L    LPE  LYVTLEPC MC  AI  +RI  +Y+GA + K G  E+  + ++L   ++
Sbjct: 64  KLGGWRLPECALYVTLEPCPMCCGAIINSRIDNVYFGAYDYKSGSAESVQKMFSLPY-NY 122

Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149
            PE+  GI E+    I+ +FFKE R
Sbjct: 123 RPEVMGGIMEEECSAILSEFFKELR 147


>gi|257062766|ref|YP_003142438.1| tRNA-adenosine deaminase [Slackia heliotrinireducens DSM 20476]
 gi|256790419|gb|ACV21089.1| tRNA-adenosine deaminase [Slackia heliotrinireducens DSM 20476]
          Length = 172

 Score =  106 bits (265), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 54/143 (37%), Positives = 80/143 (55%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  A+E+A  A L  E+P+GAV V   +II+   N     +D +AHAE  AI    R L
Sbjct: 19  FMRAAIEQAHLAELDGEVPIGAVVVCQGEIIAEGRNHRETDQDPSAHAEFSAIMQASREL 78

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
            +  LP+  +YVTLEPC MC+  +  ARI R  YGA +PK G +    Q +     +H+ 
Sbjct: 79  ERWRLPDCTVYVTLEPCIMCSGLMHQARIGRCVYGAPDPKAGALGTLYQVHADERLNHTF 138

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+  G+ +    ++++DFF  +R
Sbjct: 139 EVTSGVLQDECARLLKDFFARKR 161


>gi|312898548|ref|ZP_07757938.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Megasphaera micronuciformis F0359]
 gi|310620467|gb|EFQ04037.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Megasphaera micronuciformis F0359]
          Length = 158

 Score =  106 bits (265), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 60/149 (40%), Positives = 85/149 (57%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M +   +M  A+EEA+ AA   EIP+GAV +   K I+RA N    L   TAHAEILAI 
Sbjct: 1   MTQDEFYMGKAIEEAKKAAAIGEIPIGAVIIYKKKAIARAHNLRETLPSATAHAEILAIE 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
             CR+LS+  L +  LYVT EPC MCA A+  +R+ R+ YG  +PKGGG  +        
Sbjct: 61  EACRVLSRWRLTDCTLYVTAEPCPMCAGAVVNSRLDRIVYGCPDPKGGGTRSLYTIVEDE 120

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  ++  G+       +++ FF++RR
Sbjct: 121 RLNHRAQVTAGVRADECADLLKKFFQKRR 149


>gi|293367940|ref|ZP_06614578.1| tRNA-specific adenosine deaminase [Staphylococcus epidermidis
           M23864:W2(grey)]
 gi|291317969|gb|EFE58377.1| tRNA-specific adenosine deaminase [Staphylococcus epidermidis
           M23864:W2(grey)]
 gi|329737844|gb|EGG74076.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Staphylococcus epidermidis VCU045]
          Length = 168

 Score =  106 bits (265), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 57/149 (38%), Positives = 83/149 (55%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           MKK + +M  A+ EA  A    E+P+GAV V   ++I+RA N    L+  TAHAE +AI 
Sbjct: 1   MKKNHDYMRLAINEAHKAKALGEVPIGAVIVKEGQVIARAHNLRETLQQPTAHAEHIAIE 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
               ++    L E  LYVTLEPC MCA  I ++RI ++ YGA++ KGG   +        
Sbjct: 61  RASEVVGSWRLEECTLYVTLEPCVMCAGTIIMSRIPKVVYGATDSKGGCSGSLMNLLEQP 120

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H   +  GI E+   ++++ FFKE R
Sbjct: 121 QFNHRATVEKGILEEECAELLRSFFKEIR 149


>gi|167758650|ref|ZP_02430777.1| hypothetical protein CLOSCI_00991 [Clostridium scindens ATCC 35704]
 gi|167663846|gb|EDS07976.1| hypothetical protein CLOSCI_00991 [Clostridium scindens ATCC 35704]
          Length = 157

 Score =  106 bits (265), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 54/143 (37%), Positives = 80/143 (55%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  A+ +A+ A    E+P+G V V  +KII R  NR    K+  +HAE++AIR   R +
Sbjct: 8   YMKEAIRQARKAYAIGEVPIGCVIVYKDKIIGRGYNRRMADKNTLSHAELIAIRKASRKM 67

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L E  +YVTLEPC MC+ AI  +R+ R+  G  NPK G   +      +   +H  
Sbjct: 68  GDWRLEECTMYVTLEPCQMCSGAIVQSRMSRVVVGCMNPKAGCAGSILNLLQMTEFNHQA 127

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+  G+ E+   Q+++DFFKE R
Sbjct: 128 ELTTGVLEEECSQMMKDFFKELR 150


>gi|291520377|emb|CBK75598.1| Cytosine/adenosine deaminases [Butyrivibrio fibrisolvens 16/4]
          Length = 179

 Score =  106 bits (265), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 58/143 (40%), Positives = 83/143 (58%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M+ AL+EA+ A   NE+P+G V V N+KII+R  NR    K V AHAEI AI+  C+  
Sbjct: 30  YMAQALKEARKAYDINEVPIGCVIVQNDKIIARGYNRRNTDKSVLAHAEIAAIQKACKKT 89

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  LYVTLEPC MCA AI  ARI R+  GA NPK G   +      +   +H  
Sbjct: 90  GDWRLEDCTLYVTLEPCQMCAGAIVQARIPRVVVGAMNPKAGCAGSILNILQMHQFNHVC 149

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           ++   +  +  +++++ FF+E R
Sbjct: 150 DLETDVLGEECKEMMKSFFEELR 172


>gi|114565589|ref|YP_752743.1| hypothetical protein Swol_0013 [Syntrophomonas wolfei subsp. wolfei
           str. Goettingen]
 gi|114336524|gb|ABI67372.1| tRNA-adenosine deaminase [Syntrophomonas wolfei subsp. wolfei str.
           Goettingen]
          Length = 151

 Score =  106 bits (265), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 58/143 (40%), Positives = 79/143 (55%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  ALEEA+ A  R EIPVGA+ V N KII+RA N     +D TAHAE+LA++   R L
Sbjct: 6   FMRHALEEAREAYKRGEIPVGAIVVHNGKIIARAHNEKESYQDATAHAEMLALQRAARHL 65

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L E  LY TLEPC MCA A+   R+  L YG ++PK G   +          +H  
Sbjct: 66  GHWRLNESVLYCTLEPCVMCAGAMVNVRLGHLVYGVTDPKAGSAGSIYDIVRSPALNHQV 125

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
            +  G+ ++   ++++ FF   R
Sbjct: 126 VVEGGVLKEECSELLKRFFASLR 148


>gi|240949642|ref|ZP_04753977.1| tRNA-adenosine deaminase, cytosine/adenosine deaminases
           [Actinobacillus minor NM305]
 gi|240295900|gb|EER46576.1| tRNA-adenosine deaminase, cytosine/adenosine deaminases
           [Actinobacillus minor NM305]
          Length = 150

 Score =  106 bits (265), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 65/143 (45%), Positives = 78/143 (54%), Gaps = 1/143 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  AL  A  A    EIPVGAV +  N KI+    NR+  L D TAHAEI AIRM    L
Sbjct: 1   MQYALSLADKAEQEGEIPVGAVLIDKNGKILGEGWNRSIILSDSTAHAEIQAIRMAGEQL 60

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  LYVTLEPCTMCA AI  +RI RL +GAS+ K G I +    +     +H  
Sbjct: 61  QNYRLLDTTLYVTLEPCTMCAGAILHSRIGRLVFGASDYKTGAIGSRFHLFEDYKMNHFL 120

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           +I  G+      Q I  FFK+RR
Sbjct: 121 QIRGGVMRDECSQKISAFFKKRR 143


>gi|319655047|ref|ZP_08009117.1| cytidine/deoxycytidylate deaminase [Bacillus sp. 2_A_57_CT2]
 gi|317393271|gb|EFV74039.1| cytidine/deoxycytidylate deaminase [Bacillus sp. 2_A_57_CT2]
          Length = 178

 Score =  106 bits (265), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 55/141 (39%), Positives = 82/141 (58%)

Query: 6   VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           ++M  A++EA+ A    E+P+GAV VL  +II+RA N     +   AHAE+LAI   C+ 
Sbjct: 11  LYMQEAIKEAKLAEGLEEVPIGAVIVLEGEIIARAHNLREVNQTAIAHAELLAIDQACKN 70

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           L    L    LYVTLEPC MC+ +I L+RI+++ YGA +PKGG              +H 
Sbjct: 71  LGTWRLENAVLYVTLEPCPMCSGSIILSRIKKVVYGAKDPKGGCAGTLMNLLQDERFNHQ 130

Query: 126 PEIYPGISEQRSRQIIQDFFK 146
            E+ PG+ E+   +++  FF+
Sbjct: 131 SEVVPGVLEEECGEMLSSFFR 151


>gi|294647204|ref|ZP_06724803.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Bacteroides ovatus SD CC 2a]
 gi|294809184|ref|ZP_06767900.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Bacteroides xylanisolvens SD CC 1b]
 gi|292637491|gb|EFF55910.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Bacteroides ovatus SD CC 2a]
 gi|294443578|gb|EFG12329.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Bacteroides xylanisolvens SD CC 1b]
          Length = 145

 Score =  106 bits (265), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 59/143 (41%), Positives = 78/143 (54%), Gaps = 5/143 (3%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  AL EA  AA R E+PVGAV V   +II+RA N    L DVTAHAE+  I     +L
Sbjct: 7   FMKQALIEAGKAAERGEVPVGAVVVCKERIIARAHNLTETLNDVTAHAEMQVITAAANVL 66

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
             + L E  LYVT+EPC MCA AI+ A+  +L +GA + K      G Q Y  +  H   
Sbjct: 67  GGKYLNECTLYVTVEPCVMCAGAIAWAQTGKLVFGAEDEK-----RGYQKYAGSALHPKT 121

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
            +  GI       ++++FF  +R
Sbjct: 122 VVVKGIMADECAALMKEFFAAKR 144


>gi|253682749|ref|ZP_04863545.1| tRNA-specific adenosine deaminase [Clostridium botulinum D str.
           1873]
 gi|253561071|gb|EES90524.1| tRNA-specific adenosine deaminase [Clostridium botulinum D str.
           1873]
          Length = 147

 Score =  106 bits (264), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 60/146 (41%), Positives = 84/146 (57%), Gaps = 7/146 (4%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  AL+EA+ A   +E+PVGA+ V   K+I+ A N   +LKD TAHAEILAI+  C IL
Sbjct: 5   FMKLALKEAKIAKNMDEVPVGAIIVKEGKVIASAHNLREKLKDPTAHAEILAIKKACEIL 64

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKG---GGIENGTQFYTLATCH 123
               L + ++YVTLEPC MC  AI  +RI+++Y G  +P     G + +  Q   L T  
Sbjct: 65  GDWRLSDCEMYVTLEPCPMCTGAIIQSRIKKIYIGTFDPVAGCCGSVVDLVQNRYLNTMI 124

Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149
               +Y     +   +I+ +FFK RR
Sbjct: 125 DVIWLY----HKECSEILTNFFKNRR 146


>gi|148981936|ref|ZP_01816576.1| cytosine/adenosine deaminase [Vibrionales bacterium SWAT-3]
 gi|145960698|gb|EDK26041.1| cytosine/adenosine deaminase [Vibrionales bacterium SWAT-3]
          Length = 181

 Score =  106 bits (264), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 54/147 (36%), Positives = 82/147 (55%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
           +  +FM  A+E A+ A    E+PVGAV V + ++IS   NR+    D TAHAE+  +R  
Sbjct: 9   QDEIFMRRAIEVAKKAESEGEVPVGAVLVKDGEVISEGWNRSIGSHDATAHAEVETLRKA 68

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
            ++L    L +  LYVTLEPC MCA A+  +R++R+ +GA + K G        +     
Sbjct: 69  GQVLENYRLLDTTLYVTLEPCPMCAGALLHSRVKRIVFGAPDLKAGAAGTVLNLFESQAS 128

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H  ++  G+ E   R+ +Q FFK RR
Sbjct: 129 YHYADVEHGLLEDECREQLQAFFKRRR 155


>gi|160891295|ref|ZP_02072298.1| hypothetical protein BACUNI_03744 [Bacteroides uniformis ATCC 8492]
 gi|156859516|gb|EDO52947.1| hypothetical protein BACUNI_03744 [Bacteroides uniformis ATCC 8492]
          Length = 138

 Score =  106 bits (264), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 59/142 (41%), Positives = 78/142 (54%), Gaps = 5/142 (3%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  AL EA  A  R E+PVGAV V  ++II+RA N    L DVTAHAE+ AI      L 
Sbjct: 1   MKQALLEAHKAGERGEVPVGAVVVCKDRIIARAHNLTETLTDVTAHAEMQAITAAAATLG 60

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
            + L E  LYVT+EPC MCA AI+ A++ RL +GA + K      G Q Y     H   +
Sbjct: 61  GKYLNECTLYVTVEPCVMCAGAIAWAQMGRLVFGAEDEK-----RGYQRYASQALHPKTQ 115

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
           +  GI       ++++FF  +R
Sbjct: 116 VVKGILADECAALMKEFFAAKR 137


>gi|119897879|ref|YP_933092.1| cytidine deaminase [Azoarcus sp. BH72]
 gi|119670292|emb|CAL94205.1| cytidine deaminase [Azoarcus sp. BH72]
          Length = 154

 Score =  106 bits (264), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 59/147 (40%), Positives = 79/147 (53%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
           K  +FM  ALE+A  A   +E+PVGAV V   +I+ R  N+     D TAHAE++A+R  
Sbjct: 2   KDEMFMRAALEQAHLAGACDEVPVGAVVVCEGEIVGRGFNQPIGRHDPTAHAEVMALRDA 61

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
              L    LP  +LYVTLEPC MC+ AI  ARI R+ YGA +PK G   +    Y     
Sbjct: 62  AARLGNYRLPGCELYVTLEPCVMCSGAIMHARIARVVYGARDPKTGVAGSVIDLYAEGRL 121

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H   I  G+  +    ++  FF  RR
Sbjct: 122 NHHASIEGGLLAEECGGLLSSFFAARR 148


>gi|260221448|emb|CBA30021.1| hypothetical protein Csp_A15070 [Curvibacter putative symbiont of
           Hydra magnipapillata]
          Length = 408

 Score =  106 bits (264), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 54/149 (36%), Positives = 82/149 (55%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           ++    FMS ALE+A  A L  E+PVGAV V   ++I++  NR  E  D +AHAE++A++
Sbjct: 4   IQSDEYFMSLALEQAIEAELAGEVPVGAVIVKGGQVIAKGRNRTIEWNDPSAHAEVVALK 63

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              R      L  + L+VTLEPC MC+ AI   RI R+ +GA++PK G   +    + + 
Sbjct: 64  EAARACGTHRLSGLQLFVTLEPCAMCSGAIFHGRIERVVFGAADPKTGCAGSVLNLFAVD 123

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  E+  G+       I+  FF+  R
Sbjct: 124 KLNHHAEVSGGVLSHECSDILVRFFERSR 152


>gi|93006499|ref|YP_580936.1| CMP/dCMP deaminase, zinc-binding [Psychrobacter cryohalolentis K5]
 gi|92394177|gb|ABE75452.1| tRNA-adenosine deaminase [Psychrobacter cryohalolentis K5]
          Length = 197

 Score =  106 bits (264), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 58/144 (40%), Positives = 85/144 (59%), Gaps = 1/144 (0%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M+ AL+ A+  A + E+PVGAV V N +II +  N      D TAHAEI+A+R  C  L
Sbjct: 43  WMTEALKLAKQGAEKEEVPVGAVLVHNQQIIGQGFNEPIGRCDATAHAEIVALRDACTRL 102

Query: 67  SQEILP-EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           +   LP +  LYVTLEPCTMC  A+  AR+ RL Y A  P+ G + +          +H 
Sbjct: 103 NNYRLPLKTTLYVTLEPCTMCMGAMIHARVDRLVYAAHEPRAGVLGSQMNLAEQPFYNHR 162

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
            ++  G+  + S Q+++DFF++RR
Sbjct: 163 MQVDAGLCREHSSQMLKDFFRQRR 186


>gi|110597776|ref|ZP_01386060.1| CMP/dCMP deaminase, zinc-binding [Chlorobium ferrooxidans DSM
           13031]
 gi|110340683|gb|EAT59163.1| CMP/dCMP deaminase, zinc-binding [Chlorobium ferrooxidans DSM
           13031]
          Length = 153

 Score =  106 bits (264), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 57/143 (39%), Positives = 80/143 (55%), Gaps = 1/143 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNN-KIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  A  EA  A  + E+PVGAV V +N  +I R  N+   L D TAHAE++A+      +
Sbjct: 8   MELAFREAIKAFEKKEVPVGAVIVDSNGHVIGRGYNQVESLCDATAHAEMIALTSAMATI 67

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
             + L +  L VT+EPC MCA AI  A++ R+ +GA +PK G              +H P
Sbjct: 68  GNKYLEDCTLAVTMEPCPMCAGAIVNAKVGRVVFGAYDPKMGASGTVMNITGCQQLNHQP 127

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+Y GI E + R ++QDFF+E R
Sbjct: 128 EVYGGIMENKCRTLLQDFFRELR 150


>gi|170723352|ref|YP_001751040.1| CMP/dCMP deaminase zinc-binding [Pseudomonas putida W619]
 gi|169761355|gb|ACA74671.1| CMP/dCMP deaminase zinc-binding [Pseudomonas putida W619]
          Length = 159

 Score =  106 bits (264), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 57/143 (39%), Positives = 81/143 (56%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  AL+ A   A   E+PVGAV V + ++I +  NR     D +AHAE++AIR   +  
Sbjct: 14  FMRMALDLAAQGAALGEVPVGAVLVQHGQVIGQGFNRPIIDSDPSAHAEMVAIRAAAKSA 73

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
           S   LP   LYVTLEPC+MCA  I  +R+ R+ YGA  PK G +++  QF++    +H  
Sbjct: 74  SNYRLPGSTLYVTLEPCSMCAGLIVHSRVARVVYGALEPKAGIVQSQGQFFSQGFLNHRV 133

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
               G+  +    I+ +FFK RR
Sbjct: 134 MFEGGVLAEECGAILSEFFKARR 156


>gi|163786614|ref|ZP_02181062.1| putative cytosine/adenosine deaminase [Flavobacteriales bacterium
           ALC-1]
 gi|159878474|gb|EDP72530.1| putative cytosine/adenosine deaminase [Flavobacteriales bacterium
           ALC-1]
          Length = 149

 Score =  106 bits (264), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 57/143 (39%), Positives = 85/143 (59%), Gaps = 6/143 (4%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  AL+EA+ A  + EIPVGA+ V+ ++II+R  N    L DVTAHAE+ AI      L
Sbjct: 10  FMRKALQEAEVAFEKGEIPVGAIIVVKDRIIARTHNLTELLNDVTAHAEMQAITSAANFL 69

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
             + L +  LYVTLEPC MCA A+  ++I ++ YGAS+ + G    GT+       H   
Sbjct: 70  GGKYLIDCTLYVTLEPCQMCAGALYWSQISKIVYGASDEQRGFETMGTKL------HPKT 123

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           ++  GI  + + ++++ FF E+R
Sbjct: 124 KVVSGILAEEASELMKRFFIEKR 146


>gi|311028951|ref|ZP_07707041.1| CMP/dCMP deaminase zinc-binding protein [Bacillus sp. m3-13]
          Length = 161

 Score =  106 bits (264), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 55/143 (38%), Positives = 77/143 (53%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  A+EEA+ A    E+P+GAV V + K+IS+  N     +    HAEI+ I   C  L
Sbjct: 6   FMKLAIEEAKKAEALKEVPIGAVLVHDGKVISKGYNLRETTQRSITHAEIMVIDQACEAL 65

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L E  LYVTLEPC MCA AI  +RI ++ YGA +PK G           +  +H  
Sbjct: 66  QTWRLEEATLYVTLEPCPMCAGAIIQSRIMKVVYGAKDPKAGCAGTLMNILQDSRFNHQT 125

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+  GI E+   +++  FF++ R
Sbjct: 126 EVVSGIMEEECGELLSSFFRKLR 148


>gi|300811153|ref|ZP_07091665.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Lactobacillus delbrueckii subsp. bulgaricus
           PB2003/044-T3-4]
 gi|300497857|gb|EFK32867.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Lactobacillus delbrueckii subsp. bulgaricus
           PB2003/044-T3-4]
          Length = 171

 Score =  106 bits (264), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 51/130 (39%), Positives = 83/130 (63%), Gaps = 1/130 (0%)

Query: 21  RNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVT 79
           ++E+P+GAV V  + +II +  NR    +D TAHAEILAI+  C+ L    L +  L+VT
Sbjct: 24  QDEVPIGAVVVGPDGQIIGQGYNRRELDEDGTAHAEILAIKEACQKLDSWRLIDCSLFVT 83

Query: 80  LEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139
           LEPC MCA AI  +RI+ +Y+ A +PK G   +    +++   +H P++  G+ +++  Q
Sbjct: 84  LEPCAMCAGAIINSRIKEVYFAAMDPKAGAAGSVVDLFSVEKFNHHPKVIRGLYKEQGAQ 143

Query: 140 IIQDFFKERR 149
           +++DFF+E R
Sbjct: 144 LLKDFFREIR 153


>gi|294496892|ref|YP_003560592.1| tRNA-specific adenosine deaminase [Bacillus megaterium QM B1551]
 gi|294346829|gb|ADE67158.1| tRNA-specific adenosine deaminase [Bacillus megaterium QM B1551]
          Length = 156

 Score =  106 bits (264), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 53/143 (37%), Positives = 82/143 (57%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  A++EA  A  + E+P+GAV V N+++++ A N     +   AHAE+LAI   C+ L
Sbjct: 7   YMRLAIDEALKAKDKLEVPIGAVIVQNDEVVASAYNLRETEQRSVAHAELLAIDEACKKL 66

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  LYVTLEPC MCA AI L+R++R+ +GA +PKGG              +H  
Sbjct: 67  GTWRLEDATLYVTLEPCPMCAGAIVLSRVKRVVFGAYDPKGGCAGTLLNLLEFEKFNHQA 126

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           ++  G+ E+    ++  FF+E R
Sbjct: 127 QVVGGMLEEECGSLLTTFFRELR 149


>gi|282915881|ref|ZP_06323646.1| tRNA-adenosine deaminase [Staphylococcus aureus subsp. aureus D139]
 gi|283769715|ref|ZP_06342607.1| tRNA-adenosine deaminase [Staphylococcus aureus subsp. aureus H19]
 gi|282320177|gb|EFB50522.1| tRNA-adenosine deaminase [Staphylococcus aureus subsp. aureus D139]
 gi|283459862|gb|EFC06952.1| tRNA-adenosine deaminase [Staphylococcus aureus subsp. aureus H19]
          Length = 156

 Score =  106 bits (264), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 55/143 (38%), Positives = 82/143 (57%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM+ A+EEA+ AA   E+P+GAV   ++++I+RA N    L+  TAHAE +AI    ++L
Sbjct: 7   FMTLAIEEAKKAARLGEVPIGAVITKDDEVIARAHNLRETLQQPTAHAEHIAIERAAKVL 66

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L    LYVTLEPC MCA  I ++RI R+ YGA +PKGG   +       +  +H  
Sbjct: 67  GSWRLEGCTLYVTLEPCVMCAGTIVMSRIPRVVYGADDPKGGCSGSLMNLLQQSNFNHRA 126

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
            +  G+ ++    ++  FFK  R
Sbjct: 127 IVDKGVLKEACSTLLTTFFKNLR 149


>gi|261492526|ref|ZP_05989079.1| cytosine deaminase [Mannheimia haemolytica serotype A2 str. BOVINE]
 gi|261496801|ref|ZP_05993175.1| cytosine deaminase [Mannheimia haemolytica serotype A2 str. OVINE]
 gi|261307548|gb|EEY08877.1| cytosine deaminase [Mannheimia haemolytica serotype A2 str. OVINE]
 gi|261311685|gb|EEY12835.1| cytosine deaminase [Mannheimia haemolytica serotype A2 str. BOVINE]
          Length = 174

 Score =  106 bits (264), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 62/144 (43%), Positives = 83/144 (57%), Gaps = 1/144 (0%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           FM  AL+ A  A  + EIPVGAV V  N +II R  N+  +L D +AHAE+ AIR   + 
Sbjct: 21  FMQYALDLADLAEAKGEIPVGAVLVDKNQQIIGRGWNQTIQLCDPSAHAEMQAIRQAGQT 80

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           L    L +  LYVTLEPC MCA AI  +RI+RL +GAS+ K G + +    +     +H 
Sbjct: 81  LGNYRLLDCTLYVTLEPCPMCAGAILHSRIKRLVFGASDYKTGAVGSRYHLFEDYKMNHF 140

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
            E+   +  +   Q I DFFK+RR
Sbjct: 141 LEVQGNVLGRECSQKISDFFKQRR 164


>gi|16077086|ref|NP_387899.1| tRNA specific adenosine deaminase [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|221307827|ref|ZP_03589674.1| hypothetical protein Bsubs1_00090 [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|221312149|ref|ZP_03593954.1| hypothetical protein BsubsN3_00090 [Bacillus subtilis subsp.
           subtilis str. NCIB 3610]
 gi|221317082|ref|ZP_03598376.1| hypothetical protein BsubsJ_00090 [Bacillus subtilis subsp.
           subtilis str. JH642]
 gi|221321345|ref|ZP_03602639.1| hypothetical protein BsubsS_00090 [Bacillus subtilis subsp.
           subtilis str. SMY]
 gi|112703|sp|P21335|TADA_BACSU RecName: Full=tRNA-specific adenosine deaminase
 gi|40011|emb|CAA36389.1| unnamed protein product [Bacillus subtilis subsp. subtilis str.
           168]
 gi|467408|dbj|BAA05254.1| unknown [Bacillus subtilis]
 gi|2632285|emb|CAB11794.1| tRNA specific adenosine deaminase [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|227231|prf||1617102A 17kD protein
          Length = 161

 Score =  106 bits (264), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 54/147 (36%), Positives = 83/147 (56%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M +  ++M  A++EA+ A  + E+P+GAV V+N +II+RA N     +   AHAE+L I 
Sbjct: 1   MTQDELYMKEAIKEAKKAEEKGEVPIGAVLVINGEIIARAHNLRETEQRSIAHAEMLVID 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
             C+ L    L    LYVTLEPC MCA A+ L+R+ ++ +GA +PKGG            
Sbjct: 61  EACKALGTWRLEGATLYVTLEPCPMCAGAVVLSRVEKVVFGAFDPKGGCSGTLMNLLQEE 120

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKE 147
             +H  E+  G+ E+    ++  FF+E
Sbjct: 121 RFNHQAEVVSGVLEEECGGMLSAFFRE 147


>gi|283768643|ref|ZP_06341555.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Bulleidia extructa W1219]
 gi|283105035|gb|EFC06407.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Bulleidia extructa W1219]
          Length = 195

 Score =  106 bits (264), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 51/143 (35%), Positives = 83/143 (58%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +MS A+EEA+ A L +E+P+G V V ++ +I+R  N      +   HAE+ AI    ++ 
Sbjct: 48  YMSLAIEEAKKAELSDEVPIGCVIVCDDMVIARNHNHKESKNNAIYHAEVEAILEASKVK 107

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
           +   L + DLYVTLEPC MC  AI  +R+R +YYGA + K G ++       +   +H P
Sbjct: 108 NNWNLNDCDLYVTLEPCMMCTGAILNSRLRTIYYGADSFKAGFLKTKINLEAIRGLNHYP 167

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
            I  G+ E+   Q++  +F+++R
Sbjct: 168 VIKKGVLERECAQLLSRYFQKKR 190


>gi|189468213|ref|ZP_03016998.1| hypothetical protein BACINT_04609 [Bacteroides intestinalis DSM
           17393]
 gi|189436477|gb|EDV05462.1| hypothetical protein BACINT_04609 [Bacteroides intestinalis DSM
           17393]
          Length = 139

 Score =  106 bits (264), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 60/142 (42%), Positives = 78/142 (54%), Gaps = 5/142 (3%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  AL EA+ AA R E+PVGA+ V   +II+RA N    L DVTAHAE+ AI      L 
Sbjct: 1   MKQALVEARKAAERGEVPVGAIVVCKERIIARAHNLTETLTDVTAHAEMQAITAAASTLG 60

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
            + L E  LYVT+EPC MCA AI+ A++ RL +GA + K      G Q Y     H    
Sbjct: 61  GKYLNECTLYVTVEPCVMCAGAIAWAQMGRLVFGAEDEK-----RGYQRYAPQALHPKTV 115

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
           +  GI       +++DFF  +R
Sbjct: 116 VVKGILADDCAALMKDFFAAKR 137


>gi|193213141|ref|YP_001999094.1| CMP/dCMP deaminase zinc-binding [Chlorobaculum parvum NCIB 8327]
 gi|193086618|gb|ACF11894.1| CMP/dCMP deaminase zinc-binding [Chlorobaculum parvum NCIB 8327]
          Length = 152

 Score =  105 bits (263), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 59/150 (39%), Positives = 80/150 (53%), Gaps = 1/150 (0%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAI 59
           M   N  M  A  EA  A    E+PVGAV +  N  +I R  N+   L D TAHAE++A+
Sbjct: 1   MSDLNRCMELAFREAIKAYESKEVPVGAVVLDPNGLVIGRGYNQVETLSDATAHAEMIAL 60

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
                 L  + L    L VTLEPC MCA AI L++I R+ +GA +PK G           
Sbjct: 61  TSAMATLDNKYLEGCTLAVTLEPCPMCAGAIVLSKISRVVFGAWDPKMGASGTVLNVTGC 120

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
           +  +H PE+Y GI E ++  ++QDFF+  R
Sbjct: 121 SALNHQPEVYGGIMEHKAESLLQDFFRGLR 150


>gi|332522875|ref|ZP_08399127.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Streptococcus porcinus str. Jelinkova 176]
 gi|332314139|gb|EGJ27124.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Streptococcus porcinus str. Jelinkova 176]
          Length = 176

 Score =  105 bits (263), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 60/143 (41%), Positives = 78/143 (54%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  AL+EA+ + ++ EIP+G V V   KII R  N   EL     HAEI+AI       
Sbjct: 11  FMREALKEAEKSLVKAEIPIGCVIVKEGKIIGRGHNAREELNQAIMHAEIMAINEANVHE 70

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L E  L+VT+EPC MC+ AI LARI  + +GA N K GG  +  Q  T    +H  
Sbjct: 71  GNWRLLETSLFVTIEPCVMCSGAIGLARIPHVIFGAPNQKFGGAGSLYQILTDQRLNHRV 130

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+  G+ E    QI+QDFF + R
Sbjct: 131 ELESGLLEAECAQIMQDFFHQSR 153


>gi|209694336|ref|YP_002262264.1| tRNA-specific adenosine deaminase [Aliivibrio salmonicida LFI1238]
 gi|208008287|emb|CAQ78433.1| tRNA-specific adenosine deaminase [Aliivibrio salmonicida LFI1238]
          Length = 177

 Score =  105 bits (263), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 57/144 (39%), Positives = 80/144 (55%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           K    +M  A+E A  A    E+PVGAV VLN +II    NR+    D TAHAE++AI+ 
Sbjct: 8   KSATFYMQRAIELASIAEGEGEVPVGAVIVLNGEIIGEGWNRSIGTHDATAHAEMMAIKQ 67

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
             + +    L    LYVTLEPC MCA AI  +RI+++++GA++ K G   +    +T AT
Sbjct: 68  AGQTVENYRLVNATLYVTLEPCPMCAGAIVQSRIKQVFFGAADLKTGASGSVINLFTAAT 127

Query: 122 CHHSPEIYPGISEQRSRQIIQDFF 145
             H  E   G+     R+ +Q FF
Sbjct: 128 AFHFVECESGLMADECREQLQAFF 151


>gi|159045329|ref|YP_001534123.1| hypothetical protein Dshi_2789 [Dinoroseobacter shibae DFL 12]
 gi|157913089|gb|ABV94522.1| hypothetical protein Dshi_2789 [Dinoroseobacter shibae DFL 12]
          Length = 151

 Score =  105 bits (263), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 65/129 (50%), Positives = 87/129 (67%), Gaps = 1/129 (0%)

Query: 22  NEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80
            E+PVGAV +    K+++RAGNR REL D TAHAE+LAIR  C     E LP   LYVTL
Sbjct: 22  GEVPVGAVLIDPAGKVLARAGNRTRELSDPTAHAEVLAIRAACAAAGSERLPGAVLYVTL 81

Query: 81  EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140
           EPC +CAA I+ ARI RL YGA++PK GG+ +G + ++    HH PE+  GI+  ++  +
Sbjct: 82  EPCAICAATIAAARIARLVYGAADPKSGGVAHGARVFSHPQSHHVPEVIDGIAAAQAEAL 141

Query: 141 IQDFFKERR 149
           ++DFF  RR
Sbjct: 142 LKDFFAARR 150


>gi|269468375|gb|EEZ80040.1| cytosine/adenosine deaminase [uncultured SUP05 cluster bacterium]
          Length = 156

 Score =  105 bits (263), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 58/143 (40%), Positives = 82/143 (57%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  ALE+A+ A  +NE+PVGA+ V N+++I+ A N+     D TAHAEI  +R+  + L
Sbjct: 11  WMKIALEQARFAQAKNEVPVGAILVKNDQLIASAHNQPISNNDPTAHAEIQLLRVAGKRL 70

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
           +   LP   LYVTLEPCTMC  A+  AR+ R+ +GA + K G   +     T    +H  
Sbjct: 71  NNYRLPNTTLYVTLEPCTMCLGAMIHARVSRVVFGAYDKKTGVCGSCQDLVTSKCFNHQL 130

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           +   GI E     +I  FFK RR
Sbjct: 131 QAQGGILESECSSLISQFFKNRR 153


>gi|238918820|ref|YP_002932334.1| cytidine and deoxycytidylate deaminase family protein [Edwardsiella
           ictaluri 93-146]
 gi|238868388|gb|ACR68099.1| cytidine and deoxycytidylate deaminase family protein [Edwardsiella
           ictaluri 93-146]
          Length = 170

 Score =  105 bits (263), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 58/143 (40%), Positives = 81/143 (56%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  AL+ A+ A  + E+PVGAV VLN+++I    NR     D TAHAEI+A++ G  ++
Sbjct: 9   WMRHALQLAEKARAQGEVPVGAVLVLNDRVIGEGWNRPITRHDPTAHAEIMALQQGGAVM 68

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L E  LYVTLEPC MCA A+  +RIRRL YGA + K G   +          +H  
Sbjct: 69  QNYRLLEATLYVTLEPCVMCAGAMVHSRIRRLVYGAPDLKTGAAGSLLDVLGHPGMNHRI 128

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+  G+        + DFF++RR
Sbjct: 129 EVCGGVLADACAAQLSDFFRQRR 151


>gi|84388906|ref|ZP_00991114.1| Cytosine/adenosine deaminase [Vibrio splendidus 12B01]
 gi|84376970|gb|EAP93842.1| Cytosine/adenosine deaminase [Vibrio splendidus 12B01]
          Length = 194

 Score =  105 bits (263), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 57/147 (38%), Positives = 80/147 (54%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
           +  +FM  A+E A+ A    E+PVGAV V   +IIS   NR+    D TAHAEI  +R  
Sbjct: 9   QDEIFMRRAIEVAKQAEKEGEVPVGAVLVKEGEIISEGWNRSIGSHDATAHAEIETLRKA 68

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
            + L    L +  LYVTLEPC MCA A+  +R++R+ +GA + K G        +     
Sbjct: 69  GQALENYRLLDTTLYVTLEPCPMCAGALLHSRVKRIVFGAPDLKAGAAGTVLNLFESQAS 128

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H  ++  G+ EQ  R  +Q FFK RR
Sbjct: 129 YHYADVENGLLEQECRDQLQAFFKRRR 155


>gi|15923548|ref|NP_371082.1| cytosine deaminase [Staphylococcus aureus subsp. aureus Mu50]
 gi|15926236|ref|NP_373769.1| hypothetical protein SA0516 [Staphylococcus aureus subsp. aureus
           N315]
 gi|21282242|ref|NP_645330.1| hypothetical protein MW0513 [Staphylococcus aureus subsp. aureus
           MW2]
 gi|49485423|ref|YP_042644.1| putative deaminase [Staphylococcus aureus subsp. aureus MSSA476]
 gi|87160687|ref|YP_493246.1| putative deaminase [Staphylococcus aureus subsp. aureus
           USA300_FPR3757]
 gi|88194321|ref|YP_499113.1| hypothetical protein SAOUHSC_00541 [Staphylococcus aureus subsp.
           aureus NCTC 8325]
 gi|148267018|ref|YP_001245961.1| CMP/dCMP deaminase, zinc-binding [Staphylococcus aureus subsp.
           aureus JH9]
 gi|150393065|ref|YP_001315740.1| CMP/dCMP deaminase zinc-binding [Staphylococcus aureus subsp.
           aureus JH1]
 gi|151220732|ref|YP_001331554.1| hypothetical protein NWMN_0520 [Staphylococcus aureus subsp. aureus
           str. Newman]
 gi|156978887|ref|YP_001441146.1| hypothetical protein SAHV_0556 [Staphylococcus aureus subsp. aureus
           Mu3]
 gi|161508798|ref|YP_001574457.1| deaminase [Staphylococcus aureus subsp. aureus USA300_TCH1516]
 gi|221141004|ref|ZP_03565497.1| deaminase [Staphylococcus aureus subsp. aureus str. JKD6009]
 gi|253315668|ref|ZP_04838881.1| putative deaminase [Staphylococcus aureus subsp. aureus str.
           CF-Marseille]
 gi|253732567|ref|ZP_04866732.1| deaminase [Staphylococcus aureus subsp. aureus TCH130]
 gi|255005352|ref|ZP_05143953.2| putative deaminase [Staphylococcus aureus subsp. aureus Mu50-omega]
 gi|257795343|ref|ZP_05644322.1| deaminase [Staphylococcus aureus A9781]
 gi|258408970|ref|ZP_05681251.1| deaminase [Staphylococcus aureus A9763]
 gi|258420392|ref|ZP_05683335.1| tRNA-adenosine deaminase [Staphylococcus aureus A9719]
 gi|258422595|ref|ZP_05685501.1| CMP/dCMP deaminase, zinc-binding [Staphylococcus aureus A9635]
 gi|258439312|ref|ZP_05690244.1| cytosine deaminase [Staphylococcus aureus A9299]
 gi|258444052|ref|ZP_05692389.1| tRNA-adenosine deaminase [Staphylococcus aureus A8115]
 gi|258446321|ref|ZP_05694479.1| CMP/dCMP deaminase zinc-binding [Staphylococcus aureus A6300]
 gi|258448414|ref|ZP_05696529.1| deaminase [Staphylococcus aureus A6224]
 gi|258452708|ref|ZP_05700706.1| conserved hypothetical protein [Staphylococcus aureus A5948]
 gi|258453770|ref|ZP_05701744.1| cytosine deaminase [Staphylococcus aureus A5937]
 gi|262049601|ref|ZP_06022470.1| hypothetical protein SAD30_0395 [Staphylococcus aureus D30]
 gi|262052438|ref|ZP_06024638.1| hypothetical protein SA930_0274 [Staphylococcus aureus 930918-3]
 gi|269202181|ref|YP_003281450.1| putative tRNA-specific adenosine deaminase [Staphylococcus aureus
           subsp. aureus ED98]
 gi|282894994|ref|ZP_06303217.1| tRNA-adenosine deaminase [Staphylococcus aureus A8117]
 gi|282924473|ref|ZP_06332145.1| tRNA-adenosine deaminase [Staphylococcus aureus A9765]
 gi|282928896|ref|ZP_06336487.1| tRNA-adenosine deaminase [Staphylococcus aureus A10102]
 gi|294850335|ref|ZP_06791069.1| tRNA-adenosine deaminase [Staphylococcus aureus A9754]
 gi|295406935|ref|ZP_06816738.1| tRNA-adenosine deaminase [Staphylococcus aureus A8819]
 gi|297208728|ref|ZP_06925156.1| tRNA-specific adenosine deaminase [Staphylococcus aureus subsp.
           aureus ATCC 51811]
 gi|297246241|ref|ZP_06930090.1| tRNA-adenosine deaminase [Staphylococcus aureus A8796]
 gi|300912818|ref|ZP_07130260.1| tRNA-specific adenosine deaminase [Staphylococcus aureus subsp.
           aureus TCH70]
 gi|304381843|ref|ZP_07364490.1| tRNA-specific adenosine deaminase [Staphylococcus aureus subsp.
           aureus ATCC BAA-39]
 gi|13700450|dbj|BAB41747.1| SA0516 [Staphylococcus aureus subsp. aureus N315]
 gi|14246326|dbj|BAB56720.1| similar to cytosine deaminase [Staphylococcus aureus subsp. aureus
           Mu50]
 gi|21203678|dbj|BAB94378.1| MW0513 [Staphylococcus aureus subsp. aureus MW2]
 gi|49243866|emb|CAG42291.1| putative deaminase [Staphylococcus aureus subsp. aureus MSSA476]
 gi|87126661|gb|ABD21175.1| putative deaminase [Staphylococcus aureus subsp. aureus
           USA300_FPR3757]
 gi|87201879|gb|ABD29689.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           NCTC 8325]
 gi|147740087|gb|ABQ48385.1| tRNA-adenosine deaminase [Staphylococcus aureus subsp. aureus JH9]
 gi|149945517|gb|ABR51453.1| CMP/dCMP deaminase zinc-binding [Staphylococcus aureus subsp.
           aureus JH1]
 gi|150373532|dbj|BAF66792.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           str. Newman]
 gi|156721022|dbj|BAF77439.1| hypothetical protein [Staphylococcus aureus subsp. aureus Mu3]
 gi|160367607|gb|ABX28578.1| deaminase [Staphylococcus aureus subsp. aureus USA300_TCH1516]
 gi|253729496|gb|EES98225.1| deaminase [Staphylococcus aureus subsp. aureus TCH130]
 gi|257789315|gb|EEV27655.1| deaminase [Staphylococcus aureus A9781]
 gi|257840321|gb|EEV64784.1| deaminase [Staphylococcus aureus A9763]
 gi|257843582|gb|EEV67988.1| tRNA-adenosine deaminase [Staphylococcus aureus A9719]
 gi|257847167|gb|EEV71175.1| CMP/dCMP deaminase, zinc-binding [Staphylococcus aureus A9635]
 gi|257847649|gb|EEV71648.1| cytosine deaminase [Staphylococcus aureus A9299]
 gi|257850722|gb|EEV74667.1| tRNA-adenosine deaminase [Staphylococcus aureus A8115]
 gi|257854915|gb|EEV77860.1| CMP/dCMP deaminase zinc-binding [Staphylococcus aureus A6300]
 gi|257858283|gb|EEV81170.1| deaminase [Staphylococcus aureus A6224]
 gi|257859581|gb|EEV82431.1| conserved hypothetical protein [Staphylococcus aureus A5948]
 gi|257864026|gb|EEV86780.1| cytosine deaminase [Staphylococcus aureus A5937]
 gi|259159684|gb|EEW44728.1| hypothetical protein SA930_0274 [Staphylococcus aureus 930918-3]
 gi|259162341|gb|EEW46914.1| hypothetical protein SAD30_0395 [Staphylococcus aureus D30]
 gi|262074471|gb|ACY10444.1| putative tRNA-specific adenosine deaminase [Staphylococcus aureus
           subsp. aureus ED98]
 gi|269940131|emb|CBI48507.1| putative deaminase [Staphylococcus aureus subsp. aureus TW20]
 gi|282589504|gb|EFB94593.1| tRNA-adenosine deaminase [Staphylococcus aureus A10102]
 gi|282592884|gb|EFB97888.1| tRNA-adenosine deaminase [Staphylococcus aureus A9765]
 gi|282762676|gb|EFC02813.1| tRNA-adenosine deaminase [Staphylococcus aureus A8117]
 gi|285816259|gb|ADC36746.1| tRNA-specific adenosine-34 deaminase [Staphylococcus aureus
           04-02981]
 gi|294822847|gb|EFG39282.1| tRNA-adenosine deaminase [Staphylococcus aureus A9754]
 gi|294968166|gb|EFG44192.1| tRNA-adenosine deaminase [Staphylococcus aureus A8819]
 gi|296886673|gb|EFH25578.1| tRNA-specific adenosine deaminase [Staphylococcus aureus subsp.
           aureus ATCC 51811]
 gi|297176839|gb|EFH36097.1| tRNA-adenosine deaminase [Staphylococcus aureus A8796]
 gi|300885922|gb|EFK81125.1| tRNA-specific adenosine deaminase [Staphylococcus aureus subsp.
           aureus TCH70]
 gi|302332271|gb|ADL22464.1| tRNA-specific adenosine deaminase [Staphylococcus aureus subsp.
           aureus JKD6159]
 gi|302750450|gb|ADL64627.1| tRNA-specific adenosine deaminase [Staphylococcus aureus subsp.
           aureus str. JKD6008]
 gi|304339629|gb|EFM05576.1| tRNA-specific adenosine deaminase [Staphylococcus aureus subsp.
           aureus ATCC BAA-39]
 gi|312829054|emb|CBX33896.1| cytidine and deoxycytidylate deaminase zinc-binding region family
           protein [Staphylococcus aureus subsp. aureus ECT-R 2]
 gi|315128851|gb|EFT84850.1| deaminase [Staphylococcus aureus subsp. aureus CGS03]
 gi|315196629|gb|EFU26976.1| deaminase [Staphylococcus aureus subsp. aureus CGS01]
 gi|320141577|gb|EFW33416.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Staphylococcus aureus subsp. aureus MRSA131]
 gi|320141794|gb|EFW33622.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Staphylococcus aureus subsp. aureus MRSA177]
 gi|323439830|gb|EGA97547.1| putative deaminase [Staphylococcus aureus O11]
 gi|323443069|gb|EGB00689.1| putative deaminase [Staphylococcus aureus O46]
 gi|329313279|gb|AEB87692.1| tRNA-adenosine deaminase [Staphylococcus aureus subsp. aureus
           T0131]
 gi|329727928|gb|EGG64377.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Staphylococcus aureus subsp. aureus 21172]
 gi|329731027|gb|EGG67400.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Staphylococcus aureus subsp. aureus 21189]
 gi|329731987|gb|EGG68343.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Staphylococcus aureus subsp. aureus 21193]
          Length = 156

 Score =  105 bits (263), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 54/143 (37%), Positives = 82/143 (57%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM+ A+EEA+ AA   E+P+GA+   ++++I+RA N    L+  TAHAE +AI    ++L
Sbjct: 7   FMTLAIEEAKKAAQLGEVPIGAIITKDDEVIARAHNLRETLQQPTAHAEHIAIERAAKVL 66

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L    LYVTLEPC MCA  I ++RI R+ YGA +PKGG   +       +  +H  
Sbjct: 67  GSWRLEGCTLYVTLEPCVMCAGTIVMSRIPRVVYGADDPKGGCSGSLMNLLQQSNFNHRA 126

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
            +  G+ ++    ++  FFK  R
Sbjct: 127 IVDKGVLKEACSTLLTTFFKNLR 149


>gi|298693889|gb|ADI97111.1| cytosine deaminase [Staphylococcus aureus subsp. aureus ED133]
          Length = 156

 Score =  105 bits (263), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 54/143 (37%), Positives = 82/143 (57%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM+ A+EEA+ AA   E+P+GA+   ++++I+RA N    L+  TAHAE +AI    ++L
Sbjct: 7   FMTLAIEEAKKAAQLGEVPIGAIITKDDEVIARAHNLRETLQQPTAHAEHIAIERAAKVL 66

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L    LYVTLEPC MCA  I ++RI R+ YGA +PKGG   +       +  +H  
Sbjct: 67  GSWRLEGCTLYVTLEPCVMCAGTIVMSRIPRVVYGADDPKGGCSGSLMNLLQQSNFNHRA 126

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
            +  G+ ++    ++  FFK  R
Sbjct: 127 IVDKGVLKEACSTLLTTFFKNLR 149


>gi|284023569|ref|ZP_06377967.1| putative tRNA-specific adenosine deaminase [Staphylococcus aureus
           subsp. aureus 132]
          Length = 156

 Score =  105 bits (263), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 54/143 (37%), Positives = 82/143 (57%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM+ A+EEA+ AA   E+P+GA+   ++++I+RA N    L+  TAHAE +AI    ++L
Sbjct: 7   FMTLAIEEAKKAAQLGEVPIGAIITKDDEVIARAHNLRETLQQPTAHAEHIAIERAAKVL 66

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L    LYVTLEPC MCA  I ++RI R+ YGA +PKGG   +       +  +H  
Sbjct: 67  GSWRLEGCTLYVTLEPCVMCAGTIVMSRIPRVVYGADDPKGGCSGSLMNLLQQSNFNHRA 126

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
            +  G+ ++    ++  FFK  R
Sbjct: 127 IVDKGVLKEACSTLLTTFFKNLR 149


>gi|324992584|gb|EGC24505.1| tRNA-specific adenosine deaminase [Streptococcus sanguinis SK405]
          Length = 156

 Score =  105 bits (263), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 59/149 (39%), Positives = 84/149 (56%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +++   FM  AL+EA+ A   +EIP+G V V   KII R  N   EL+    HAEI+AI 
Sbjct: 6   IEEKEAFMREALKEAEIALAHDEIPIGCVLVKEGKIIGRGHNAREELQRAVMHAEIMAIE 65

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              R  +   L    L+VT+EPC MC+ AI LARI  + YGA+N K G   +     T  
Sbjct: 66  EANRHENSWRLLGTTLFVTIEPCVMCSGAIGLARIPHVVYGAANQKFGAAGSLYDILTDE 125

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  E+  G+ ++   QI+Q+FF++RR
Sbjct: 126 RLNHRVEVETGVLQEECAQIMQEFFRQRR 154


>gi|332519171|ref|ZP_08395638.1| CMP/dCMP deaminase, zinc-binding [Lacinutrix algicola 5H-3-7-4]
 gi|332045019|gb|EGI81212.1| CMP/dCMP deaminase, zinc-binding [Lacinutrix algicola 5H-3-7-4]
          Length = 149

 Score =  105 bits (263), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 59/145 (40%), Positives = 84/145 (57%), Gaps = 6/145 (4%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           N FM  AL+EA+ A  + EIPVGAV V+ N+II+RA N    L DVTAHAE+ AI     
Sbjct: 8   NYFMKKALQEAEVAFDKGEIPVGAVIVIENRIIARAHNLTELLNDVTAHAEMQAITAAAN 67

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
            L  + L    LYVTLEPC MCA A+  +++ ++ YGA + + G I   T+       H 
Sbjct: 68  FLGGKYLKNCTLYVTLEPCQMCAGALYWSQVSKIVYGARDEERGCINLQTKL------HP 121

Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149
             ++  GI  + +  +++ FF E+R
Sbjct: 122 KTKLEGGILAKEASSLMKRFFIEKR 146


>gi|258645306|ref|ZP_05732775.1| zinc-binding domain protein [Dialister invisus DSM 15470]
 gi|260402655|gb|EEW96202.1| zinc-binding domain protein [Dialister invisus DSM 15470]
          Length = 151

 Score =  105 bits (263), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 56/144 (38%), Positives = 86/144 (59%), Gaps = 3/144 (2%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +MS A++EA+ A    EIP+GA+ VL++ +I+ A N+     D TAHAEILAI+    IL
Sbjct: 6   YMSLAMQEAKKALTSREIPIGAIIVLHDSVIAAAHNQCENRSDPTAHAEILAIKKASAIL 65

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT-CHHS 125
               L    LYVT+EPC MCA A   A +  + YGA NP  GGI+  ++F  +    +H+
Sbjct: 66  GNWRLTGCSLYVTIEPCPMCAGAAVNAHLSSIIYGAPNPWYGGID--SKFRIVQNPFNHA 123

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
             +  G+ +   +Q++ +FF ++R
Sbjct: 124 VSVIRGVCQSECQQLMDEFFDDKR 147


>gi|88192205|pdb|2B3J|A Chain A, Crystal Structure Of Staphylococcus Aureus Trna Adenosine
           Deaminase, Tada, In Complex With Rna
 gi|88192206|pdb|2B3J|B Chain B, Crystal Structure Of Staphylococcus Aureus Trna Adenosine
           Deaminase, Tada, In Complex With Rna
 gi|88192207|pdb|2B3J|C Chain C, Crystal Structure Of Staphylococcus Aureus Trna Adenosine
           Deaminase, Tada, In Complex With Rna
 gi|88192208|pdb|2B3J|D Chain D, Crystal Structure Of Staphylococcus Aureus Trna Adenosine
           Deaminase, Tada, In Complex With Rna
          Length = 159

 Score =  105 bits (263), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 54/143 (37%), Positives = 82/143 (57%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM+ A+EEA+ AA   E+P+GA+   ++++I+RA N    L+  TAHAE +AI    ++L
Sbjct: 10  FMTLAIEEAKKAAQLGEVPIGAIITKDDEVIARAHNLRETLQQPTAHAEHIAIERAAKVL 69

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L    LYVTLEPC MCA  I ++RI R+ YGA +PKGG   +       +  +H  
Sbjct: 70  GSWRLEGCTLYVTLEPCVMCAGTIVMSRIPRVVYGADDPKGGCSGSLMNLLQQSNFNHRA 129

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
            +  G+ ++    ++  FFK  R
Sbjct: 130 IVDKGVLKEACSTLLTTFFKNLR 152


>gi|321313686|ref|YP_004205973.1| tRNA specific adenosine deaminase [Bacillus subtilis BSn5]
 gi|320019960|gb|ADV94946.1| tRNA specific adenosine deaminase [Bacillus subtilis BSn5]
          Length = 161

 Score =  105 bits (263), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 53/147 (36%), Positives = 84/147 (57%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M +  ++M  A++EA+ A  + E+P+GAV V+N++II+RA N     +   AHAE+L + 
Sbjct: 1   MTQDELYMKEAIKEAKKAEEKGEVPIGAVLVVNDEIIARAHNLRETEQRSIAHAEMLVMD 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
             C+ L    L    LYVTLEPC MCA A+ L+R+ ++ +GA +PKGG            
Sbjct: 61  EACKALGTWRLEGATLYVTLEPCPMCAGAVVLSRVEKVVFGAFDPKGGCSGTLMNLLQEE 120

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKE 147
             +H  E+  G+ E+    ++  FF+E
Sbjct: 121 RFNHQAEVVSGVLEEECGGMLSAFFRE 147


>gi|262281785|ref|ZP_06059554.1| cytidine/deoxycytidylate deaminase [Streptococcus sp. 2_1_36FAA]
 gi|262262239|gb|EEY80936.1| cytidine/deoxycytidylate deaminase [Streptococcus sp. 2_1_36FAA]
          Length = 162

 Score =  105 bits (263), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 59/143 (41%), Positives = 82/143 (57%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  AL+EA+ A   +EIP+G V V + +II R  N   EL+    HAEI+AI    +  
Sbjct: 18  FMLEALKEARIALENDEIPIGCVIVRDGQIIGRGHNAREELQRAVMHAEIMAIEEANQHE 77

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
           +   L +  L+VT+EPC MC+ AI LARI  + YGASN K G   +     T    +H  
Sbjct: 78  NSWRLLDTTLFVTIEPCVMCSGAIGLARIPHVVYGASNQKFGAAGSLYDILTDERLNHRV 137

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+  G+ ++   QI+QDFF+ RR
Sbjct: 138 EVETGVLQEECAQIMQDFFRNRR 160


>gi|86145643|ref|ZP_01063973.1| Cytosine/adenosine deaminase [Vibrio sp. MED222]
 gi|85836614|gb|EAQ54740.1| Cytosine/adenosine deaminase [Vibrio sp. MED222]
          Length = 212

 Score =  105 bits (263), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 55/147 (37%), Positives = 82/147 (55%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
           +  +FM  A+E A+ A    E+PVGAV V + ++IS   NR+    D TAHAEI  +R  
Sbjct: 27  QDEIFMRRAIEVAKQAEKEGEVPVGAVLVKDGEVISEGWNRSIGCHDATAHAEIETLRKA 86

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
            + L    L +  LYVTLEPC MCA A+  +R++R+ +GA + K G        +     
Sbjct: 87  GQALENYRLLDTTLYVTLEPCPMCAGALLHSRVKRIVFGAPDLKAGAAGTVLNLFESQAS 146

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H  ++  G+ E+  R+ +Q FFK RR
Sbjct: 147 YHYADVEHGLLEEECREQLQAFFKRRR 173


>gi|308171910|ref|YP_003918615.1| tRNA specific adenosine deaminase [Bacillus amyloliquefaciens DSM
           7]
 gi|307604774|emb|CBI41145.1| tRNA specific adenosine deaminase [Bacillus amyloliquefaciens DSM
           7]
 gi|328551718|gb|AEB22210.1| tRNA specific adenosine deaminase [Bacillus amyloliquefaciens
           TA208]
 gi|328909978|gb|AEB61574.1| tRNA specific adenosine deaminase [Bacillus amyloliquefaciens LL3]
          Length = 160

 Score =  105 bits (262), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 53/139 (38%), Positives = 82/139 (58%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  A++EA+ A  + E+P+GAV VL+++I++RA N     +   AHAE+LAI   CR L
Sbjct: 6   YMREAIKEAKKAEAKGEVPIGAVLVLHDEIVARAHNLRETEQRSLAHAEMLAIDEACRKL 65

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  LYVTLEPC MCA A+ L+R+ ++ +GA +PKGG              +H  
Sbjct: 66  GTWRLEDAVLYVTLEPCPMCAGAVVLSRVDKVVFGAFDPKGGCTGTLMNLLQEERFNHQA 125

Query: 127 EIYPGISEQRSRQIIQDFF 145
           E+  G+ E+   +++  FF
Sbjct: 126 EVVSGVLEEECGEMLSAFF 144


>gi|322418061|ref|YP_004197284.1| CMP/dCMP deaminase zinc-binding protein [Geobacter sp. M18]
 gi|320124448|gb|ADW12008.1| CMP/dCMP deaminase zinc-binding protein [Geobacter sp. M18]
          Length = 162

 Score =  105 bits (262), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 56/150 (37%), Positives = 86/150 (57%), Gaps = 1/150 (0%)

Query: 1   MKKGN-VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
           MKK +  +M  A+++A+ A    E+P+GAV V +  +I+R  N     +D  AHAE++AI
Sbjct: 1   MKKNDHYWMGKAIDQARKAESIGEVPIGAVIVKDGAVIARGHNLRESKQDPAAHAELIAI 60

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
           R   + LS   L    LYVTLEPCTMC  AI L+R+ R+ +G+ +PKGG   +   F   
Sbjct: 61  RKAAKKLSSWRLTGATLYVTLEPCTMCMGAIILSRLDRVVFGSYDPKGGAAGSLFDFSDD 120

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
              +HS  + PG+  + +  ++  FF + R
Sbjct: 121 KRLNHSVVLTPGVRGEETSSMLSCFFAKLR 150


>gi|218708682|ref|YP_002416303.1| tRNA-specific adenosine deaminase [Vibrio splendidus LGP32]
 gi|218321701|emb|CAV17655.1| tRNA-specific adenosine deaminase [Vibrio splendidus LGP32]
          Length = 212

 Score =  105 bits (262), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 55/147 (37%), Positives = 82/147 (55%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
           +  +FM  A+E A+ A    E+PVGAV V + ++IS   NR+    D TAHAEI  +R  
Sbjct: 27  QDEIFMRRAIEVAKQAEKEGEVPVGAVLVKDGEVISEGWNRSIGCHDATAHAEIETLRKA 86

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
            + L    L +  LYVTLEPC MCA A+  +R++R+ +GA + K G        +     
Sbjct: 87  GQALENYRLLDTTLYVTLEPCPMCAGALLHSRVKRIVFGAPDLKAGAAGTVLNLFESQAS 146

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H  ++  G+ E+  R+ +Q FFK RR
Sbjct: 147 YHYADVEHGLLEEECREQLQAFFKRRR 173


>gi|238784197|ref|ZP_04628210.1| tRNA-specific adenosine deaminase [Yersinia bercovieri ATCC 43970]
 gi|238714906|gb|EEQ06905.1| tRNA-specific adenosine deaminase [Yersinia bercovieri ATCC 43970]
          Length = 181

 Score =  105 bits (262), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 59/143 (41%), Positives = 82/143 (57%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  AL  A  A    E+PVGAV VL+N++I    NR+    D TAHAEI+A+R G +++
Sbjct: 22  WMQRALMLALRAQEEGEVPVGAVLVLDNQVIGEGWNRSICDSDPTAHAEIMALRQGGQVV 81

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  LYVTLEPC MCA A+  +RIRRL YGA++ K G   +          +H  
Sbjct: 82  QNYRLLDATLYVTLEPCVMCAGAMVHSRIRRLVYGANDLKTGAAGSLLDILRHPGMNHQV 141

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           EI  G+  +   Q +  FF++RR
Sbjct: 142 EISAGVLAEACSQQLSAFFRQRR 164


>gi|258543612|ref|YP_003189045.1| CMP/dCMP deaminase [Acetobacter pasteurianus IFO 3283-01]
 gi|256634690|dbj|BAI00666.1| CMP/dCMP deaminase [Acetobacter pasteurianus IFO 3283-01]
 gi|256637746|dbj|BAI03715.1| CMP/dCMP deaminase [Acetobacter pasteurianus IFO 3283-03]
 gi|256640800|dbj|BAI06762.1| CMP/dCMP deaminase [Acetobacter pasteurianus IFO 3283-07]
 gi|256643855|dbj|BAI09810.1| CMP/dCMP deaminase [Acetobacter pasteurianus IFO 3283-22]
 gi|256646910|dbj|BAI12858.1| CMP/dCMP deaminase [Acetobacter pasteurianus IFO 3283-26]
 gi|256649963|dbj|BAI15904.1| CMP/dCMP deaminase [Acetobacter pasteurianus IFO 3283-32]
 gi|256652953|dbj|BAI18887.1| CMP/dCMP deaminase [Acetobacter pasteurianus IFO 3283-01-42C]
 gi|256656007|dbj|BAI21934.1| CMP/dCMP deaminase [Acetobacter pasteurianus IFO 3283-12]
          Length = 151

 Score =  105 bits (262), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 51/129 (39%), Positives = 85/129 (65%), Gaps = 1/129 (0%)

Query: 22  NEIPVGAVAVLNN-KIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80
            E+PVGAV + +N  ++++AGNR  EL+D +AHAE+L +R   +    + L +  L+V+L
Sbjct: 21  GEVPVGAVLLDSNGNVLAQAGNRVEELRDPSAHAEMLVMREAVQQRQGQKLADCTLFVSL 80

Query: 81  EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140
           EPC MCAAA++  R+ R+ +GA +PKGGG+E+G +        H  E+  G+ EQ + ++
Sbjct: 81  EPCPMCAAAMAHFRLGRVVFGAYDPKGGGVEHGARLPYRPETLHRMEVIGGVREQEAAEM 140

Query: 141 IQDFFKERR 149
           ++ FF++ R
Sbjct: 141 LKAFFQKLR 149


>gi|322386624|ref|ZP_08060249.1| tRNA-specific adenosine deaminase [Streptococcus cristatus ATCC
           51100]
 gi|321269297|gb|EFX52232.1| tRNA-specific adenosine deaminase [Streptococcus cristatus ATCC
           51100]
          Length = 166

 Score =  105 bits (262), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 59/149 (39%), Positives = 86/149 (57%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +++  +FM  AL+EA+ A   +EIP+G V V N +II R  N   EL+    HAEI+AI 
Sbjct: 16  IEEKEMFMREALKEAEIALANDEIPIGCVLVKNGQIIGRGHNAREELQRAVMHAEIMAIE 75

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              +  +   L +  L+VT+EPC MC+ AI LARI ++ YGA N K G   +     T A
Sbjct: 76  EANQHENSWRLLDTTLFVTIEPCVMCSGAIGLARIPKVIYGAKNQKFGAGGSLYDILTDA 135

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  E+  G+ E+    I+Q+FF+ RR
Sbjct: 136 RLNHRVEVESGLLEEECAAIMQNFFRNRR 164


>gi|312864368|ref|ZP_07724601.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Streptococcus downei F0415]
 gi|311100089|gb|EFQ58300.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Streptococcus downei F0415]
          Length = 157

 Score =  105 bits (262), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 58/143 (40%), Positives = 79/143 (55%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  AL+EAQ +  + EIP+G V V + +II R  N   EL     HAEI+AI    +  
Sbjct: 12  FMQEALKEAQKSLAKEEIPIGCVIVKDGQIIGRGHNAREELNQAIMHAEIMAINQANQTE 71

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  L+VT+EPC MC+ AI LARI ++ YGA N K G   +     T    +H  
Sbjct: 72  GNWRLLDSALFVTIEPCVMCSGAIGLARIPQVIYGAPNQKFGAAGSLYDILTDQRLNHHV 131

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           ++  GI E    +I+QDFF+ RR
Sbjct: 132 QVETGILEADCAKIMQDFFRNRR 154


>gi|270285018|ref|ZP_06194412.1| cytidine/deoxycytidylate deaminase family protein [Chlamydia
           muridarum Nigg]
 gi|270289043|ref|ZP_06195345.1| cytidine/deoxycytidylate deaminase family protein [Chlamydia
           muridarum Weiss]
          Length = 148

 Score =  105 bits (262), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 57/142 (40%), Positives = 78/142 (54%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  AL+EA+ A   +E+PVG + V  + II+R  N    LKD TAHAE++ I      L 
Sbjct: 1   MKKALDEARKAYELDEVPVGCIIVQGDAIIARGHNSVERLKDPTAHAEMICISAAAEYLQ 60

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
              L +  LY TLEPC MCA AI LARI R+ +GA + + G   +    +      H  E
Sbjct: 61  NWRLKDTTLYCTLEPCLMCAGAIQLARIPRIVWGAPDLRLGAGGSWLNVFLEKHPFHQVE 120

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
             PGI  Q S  ++++FF E+R
Sbjct: 121 CCPGICHQESEWLMKNFFWEKR 142


>gi|262370390|ref|ZP_06063716.1| conserved hypothetical protein [Acinetobacter johnsonii SH046]
 gi|262314732|gb|EEY95773.1| conserved hypothetical protein [Acinetobacter johnsonii SH046]
          Length = 166

 Score =  105 bits (262), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 58/150 (38%), Positives = 84/150 (56%), Gaps = 1/150 (0%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +K  + +M  ALE+A  AA + E+PVGAV V  NKII    N    L D TAHAE+ A+R
Sbjct: 5   LKIDSEWMQLALEQAAIAASKGEVPVGAVIVSQNKIIGSGFNAPITLNDPTAHAEVQALR 64

Query: 61  MGCRILSQEILPE-VDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
             C+      LP+   +YVTLEPCTMC  A+  AR+ ++ +GA+ PK G + +  + +  
Sbjct: 65  DACQNTQNYRLPDDAVMYVTLEPCTMCVGALVHARVSKVVFGATEPKAGSLISARKLFET 124

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
              +H   +  G   ++  Q +  FFK RR
Sbjct: 125 GYYNHQFLVESGCLHEQCSQQLSHFFKMRR 154


>gi|220918865|ref|YP_002494169.1| CMP/dCMP deaminase zinc-binding [Anaeromyxobacter dehalogenans
           2CP-1]
 gi|219956719|gb|ACL67103.1| CMP/dCMP deaminase zinc-binding [Anaeromyxobacter dehalogenans
           2CP-1]
          Length = 154

 Score =  105 bits (262), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 57/138 (41%), Positives = 79/138 (57%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  AL  A+ AA R E+PVGAVA+   +++ R  N     +D TAHAE+LAI+   R L 
Sbjct: 1   MQEALGLAREAAARGEVPVGAVALFEGRVVGRGANAREAARDPTAHAELLAIQEAARTLG 60

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
           +  L  V + VTLEPC MCA A+ LARI RL YGAS+PK G   +          +H   
Sbjct: 61  RWRLTGVTVVVTLEPCAMCAGAMVLARIDRLVYGASDPKAGCTGSLQDLSADPRLNHRFP 120

Query: 128 IYPGISEQRSRQIIQDFF 145
           +  G+  + S ++++ FF
Sbjct: 121 VERGVLAEESGELLRAFF 138


>gi|294055423|ref|YP_003549081.1| CMP/dCMP deaminase zinc-binding protein [Coraliomargarita
           akajimensis DSM 45221]
 gi|293614756|gb|ADE54911.1| CMP/dCMP deaminase zinc-binding protein [Coraliomargarita
           akajimensis DSM 45221]
          Length = 181

 Score =  105 bits (262), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 56/145 (38%), Positives = 81/145 (55%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           + FM+ A  EA  A  ++E+P+GAV     +II+ A N++R   D TAHAEILAI     
Sbjct: 20  DYFMAHAFNEAIEAWKKDEVPIGAVIEYEGRIIASAHNQSRSTNDPTAHAEILAISQAAN 79

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
            L    L E  LYVT EPC MC+ A+ +ARI ++YYG  + K G +        L   +H
Sbjct: 80  TLGDWRLNECRLYVTKEPCPMCSGALVIARIGKVYYGLPDEKMGCVGGAVDLGALPRSNH 139

Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149
             E   G+ E  +  I++ FF+++R
Sbjct: 140 HFESIGGVMEDANHAILKAFFEKKR 164


>gi|146299285|ref|YP_001193876.1| CMP/dCMP deaminase, zinc-binding [Flavobacterium johnsoniae UW101]
 gi|146153703|gb|ABQ04557.1| CMP/dCMP deaminase, zinc-binding [Flavobacterium johnsoniae UW101]
          Length = 147

 Score =  105 bits (262), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 55/143 (38%), Positives = 83/143 (58%), Gaps = 6/143 (4%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  AL+EA+ A  + EIPVGA+ V+ +K+I+R+ N    L DVTAHAE+ +I      L
Sbjct: 10  FMKKALQEAEIAYEKGEIPVGAIIVVADKVIARSHNLTELLNDVTAHAEMQSITAAANFL 69

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
             + L +  LYVTLEPC MCA A+  ++I ++ +GA + + G I  GT+       H   
Sbjct: 70  GGKYLKDCTLYVTLEPCQMCAGALYWSQISKIVFGARDEQRGFINMGTKL------HPKT 123

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
            +  G+    +  +++ FF ERR
Sbjct: 124 TVVSGVMANEAADLMKRFFLERR 146


>gi|297582358|ref|YP_003698138.1| CMP/dCMP deaminase zinc-binding protein [Bacillus selenitireducens
           MLS10]
 gi|297140815|gb|ADH97572.1| CMP/dCMP deaminase zinc-binding protein [Bacillus selenitireducens
           MLS10]
          Length = 174

 Score =  105 bits (262), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 57/147 (38%), Positives = 77/147 (52%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
           K   +M  AL EA  A    E+P+GAV V ++ II+R  N     +  T HAE++AI   
Sbjct: 8   KDEAYMKEALTEADKAEAIGEVPIGAVIVKDDIIIARGYNERETKQRATGHAELVAIEEA 67

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
           CRIL    L    LYVTLEPC MCA AI  +RI R+ YGA +PKGG              
Sbjct: 68  CRILKTWRLEGCTLYVTLEPCPMCAGAIVQSRIDRVVYGADDPKGGSCGTVVNLLDEPKF 127

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H+P +  G  ++ +   +  FF+  R
Sbjct: 128 NHAPLVTSGTLKEEAADRLSSFFRALR 154


>gi|315037609|ref|YP_004031177.1| cytidine-deoxycytidylate deaminase [Lactobacillus amylovorus GRL
           1112]
 gi|325956088|ref|YP_004286698.1| cytidine-deoxycytidylate deaminase [Lactobacillus acidophilus 30SC]
 gi|312275742|gb|ADQ58382.1| cytidine-deoxycytidylate deaminase [Lactobacillus amylovorus GRL
           1112]
 gi|325332653|gb|ADZ06561.1| cytidine-deoxycytidylate deaminase [Lactobacillus acidophilus 30SC]
          Length = 168

 Score =  105 bits (262), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 53/144 (36%), Positives = 84/144 (58%), Gaps = 1/144 (0%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           +M  A+ +A+ A  + E+P+GAV V  + K+I    NR    +D T HAE++AI+  C+ 
Sbjct: 10  YMQLAIAQAKEAEKQGEVPIGAVIVDPDGKVIGTGYNRRELDEDATQHAEMIAIKEACKN 69

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           L    L +  L+VTLEPC MCA AI  +RI+ +Y+GA +PK G   +    +T+   +H 
Sbjct: 70  LGMWRLIDCSLFVTLEPCPMCAGAIINSRIKDVYFGALDPKAGACGSVVDLFTVEKFNHH 129

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
           P    G+   +  Q+++DFF+  R
Sbjct: 130 PHAIRGLYRDQCAQMLKDFFRAIR 153


>gi|304436805|ref|ZP_07396772.1| tRNA-specific adenosine deaminase [Selenomonas sp. oral taxon 149
           str. 67H29BP]
 gi|304370198|gb|EFM23856.1| tRNA-specific adenosine deaminase [Selenomonas sp. oral taxon 149
           str. 67H29BP]
          Length = 153

 Score =  105 bits (262), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 56/144 (38%), Positives = 86/144 (59%), Gaps = 3/144 (2%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNN--KIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M  ALEEA+ A    E+P+GAV +L++   +IS   N      D TAHAE++AIR  C+ 
Sbjct: 8   MRLALEEARRAYQCGEVPIGAV-ILDDVGSVISSGYNLRETEHDATAHAELIAIRRACKA 66

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           L +  L  + LYVT+EPC MCA AI ++RI R+ YG+++ K G  E+          +H 
Sbjct: 67  LGRWRLTGMTLYVTIEPCPMCAGAIVMSRISRVVYGSTDSKAGACESLFNITGCPGLNHQ 126

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
           P++  G+  +    ++++FF+ERR
Sbjct: 127 PDVCAGVLAEECAALLKNFFRERR 150


>gi|330007694|ref|ZP_08306033.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Klebsiella sp. MS 92-3]
 gi|328535375|gb|EGF61857.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Klebsiella sp. MS 92-3]
          Length = 180

 Score =  105 bits (262), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 58/143 (40%), Positives = 79/143 (55%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  AL  A+ A    E+PVGAV V NN++I    NR     D TAHAEI+A+R G  +L
Sbjct: 22  WMRHALTLAKRAWEEGEVPVGAVLVHNNQVIGEGWNRPIGRHDPTAHAEIMALRQGGLVL 81

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  LYVTLEPC MCA A+  +RI RL +GA + K G + +          +H  
Sbjct: 82  QNYRLIDATLYVTLEPCVMCAGAMVHSRIARLVFGARDAKTGAVGSLMDVLHHPGMNHRV 141

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           EI  G+  +    ++ DFF+ RR
Sbjct: 142 EISEGVLAESCSAMLSDFFRWRR 164


>gi|283469850|emb|CAQ49061.1| tRNA-specific adenosine deaminase [Staphylococcus aureus subsp.
           aureus ST398]
          Length = 156

 Score =  105 bits (262), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 55/143 (38%), Positives = 81/143 (56%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM+ A+EEA+ AA   E+P+GAV    +++I+RA N    L+  TAHAE +AI    ++L
Sbjct: 7   FMTLAIEEAKKAARLGEVPIGAVITKGDEVIARAHNLRETLQQPTAHAEHIAIERAAKVL 66

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L    LYVTLEPC MCA  I ++RI R+ YGA +PKGG   +       +  +H  
Sbjct: 67  GSWRLEGCTLYVTLEPCVMCAGTIVMSRIPRVVYGADDPKGGCSGSLMNLLQQSNFNHRA 126

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
            +  G+ ++    ++  FFK  R
Sbjct: 127 IVDKGVLKEACSTLLTTFFKNLR 149


>gi|322515941|ref|ZP_08068882.1| tRNA-specific adenosine deaminase [Streptococcus vestibularis ATCC
           49124]
 gi|322125615|gb|EFX96945.1| tRNA-specific adenosine deaminase [Streptococcus vestibularis ATCC
           49124]
          Length = 172

 Score =  105 bits (262), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 56/143 (39%), Positives = 81/143 (56%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FMS AL+EAQ +  + EIP+G V V + +I+ R  N   EL     HAE++AI+   R +
Sbjct: 12  FMSEALKEAQKSLDKAEIPIGCVIVKDREIVGRGHNAREELNQAIMHAEVMAIQEANRTV 71

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  L+VT+EPC MC+ AI LARI ++ YGA N K GG  +          +H  
Sbjct: 72  GNWRLLDCTLFVTIEPCVMCSGAIGLARIPKVIYGACNQKFGGAGSLYDILRDERLNHRV 131

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+   + E    +I+QDFF++ R
Sbjct: 132 EVETSVMEADCAKIMQDFFRQSR 154


>gi|319775162|ref|YP_004137650.1| tRNA-specific adenosine deaminase [Haemophilus influenzae F3047]
 gi|329122920|ref|ZP_08251491.1| tRNA-specific adenosine deaminase [Haemophilus aegyptius ATCC
           11116]
 gi|317449753|emb|CBY85960.1| tRNA-specific adenosine deaminase [Haemophilus influenzae F3047]
 gi|327471851|gb|EGF17291.1| tRNA-specific adenosine deaminase [Haemophilus aegyptius ATCC
           11116]
          Length = 173

 Score =  105 bits (262), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 63/143 (44%), Positives = 81/143 (56%), Gaps = 1/143 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  ALE A  A    EIPVGAV V +   II    N +    D TAHAEI+A+R G + +
Sbjct: 15  MRYALELADKAEALGEIPVGAVLVDDAGNIIGEGWNLSIVQSDPTAHAEIIALRNGAKNI 74

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L    LYVTLEPCTMCA AI  +RIRRL +GAS+ K G I +   F+     +H+ 
Sbjct: 75  QNYRLLNSTLYVTLEPCTMCAGAILHSRIRRLVFGASDYKTGAIGSRFHFFDDYKMNHTL 134

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           EI  G+  +   Q +  FF++RR
Sbjct: 135 EITSGVLAEECSQKLSTFFQKRR 157


>gi|325108107|ref|YP_004269175.1| tRNA-adenosine deaminase [Planctomyces brasiliensis DSM 5305]
 gi|324968375|gb|ADY59153.1| tRNA-adenosine deaminase [Planctomyces brasiliensis DSM 5305]
          Length = 162

 Score =  105 bits (262), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 54/143 (37%), Positives = 81/143 (56%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  AL+EA  A    E+PVGA+ V +  +I+ A N+   L D TAHAE++A+      L
Sbjct: 15  YMRMALDEAVAAFDEKEVPVGAIIVHDGHVIAAAHNQRETLNDPTAHAEMIALTQAATAL 74

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  LYVTLEPC MCA AI  AR+ R+ YG ++ K G   +     +    +H  
Sbjct: 75  ESWRLEDCTLYVTLEPCPMCAGAIVQARVPRVVYGTTDLKAGACHSLYSITSDPRLNHRS 134

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+ PG+     + I+Q+FF+++R
Sbjct: 135 EVLPGVLAPDCKAILQEFFRQQR 157


>gi|110636535|ref|YP_676742.1| cytosine/adenosine deaminase [Cytophaga hutchinsonii ATCC 33406]
 gi|110279216|gb|ABG57402.1| cytosine/adenosine deaminase [Cytophaga hutchinsonii ATCC 33406]
          Length = 148

 Score =  105 bits (262), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 60/143 (41%), Positives = 82/143 (57%), Gaps = 5/143 (3%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  AL+EAQ A  + EIPVGAV V NN+IISRA N+   L DVTAHAE+LAI      L
Sbjct: 10  FMREALKEAQKAFEKGEIPVGAVVVSNNQIISRAYNQTELLSDVTAHAEMLAITAAANHL 69

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
             + L +  L+VTLEPC MCA A++ ++I  + Y A +     I  G    +    H   
Sbjct: 70  GGKYLSDCTLFVTLEPCVMCAGALTWSQIGNVVYAAKD-----IRRGYSTISGLKMHPKT 124

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
            +  G   + S +++ DFF++ R
Sbjct: 125 RVCQGPFSEESEKLLLDFFRKLR 147


>gi|157691308|ref|YP_001485770.1| nucleoside deaminase [Bacillus pumilus SAFR-032]
 gi|157680066|gb|ABV61210.1| possible nucleoside deaminase [Bacillus pumilus SAFR-032]
          Length = 158

 Score =  105 bits (262), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 54/149 (36%), Positives = 82/149 (55%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M +   FM  A+ EA  A    E+P+GA+ V++++I+SRA N     +   AHAE+LAI 
Sbjct: 1   MTRDEQFMQEAISEALKAEQIGEVPIGAIIVVDDQIVSRAHNLRETEQRSIAHAELLAID 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
             C+      L +  LYVTLEPC MCA AI L+R++++ +GA +PKGG            
Sbjct: 61  EACKTTESWRLEDAVLYVTLEPCPMCAGAIVLSRVKKVVFGAYDPKGGCAGTLMNLLDDE 120

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  E+  G+ E    +++  FF+  R
Sbjct: 121 RFNHQSEVIGGVLENECGELLSQFFRNLR 149


>gi|21673220|ref|NP_661285.1| cytosine deaminase, putative [Chlorobium tepidum TLS]
 gi|21646303|gb|AAM71627.1| cytosine deaminase, putative [Chlorobium tepidum TLS]
          Length = 152

 Score =  105 bits (262), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 59/150 (39%), Positives = 80/150 (53%), Gaps = 1/150 (0%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAI 59
           M   N  M  A  EA  A    E+PVGAV +  N  II R  N+   L D TAHAE++A+
Sbjct: 1   MSDLNHCMELAFREAIKAYESKEVPVGAVVLDPNGLIIGRGYNQVETLSDATAHAEMIAL 60

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
                 +  + L    L VTLEPC MCA AI L++I R+ +GA +PK G           
Sbjct: 61  TSAMATIGSKYLEGCTLAVTLEPCPMCAGAIVLSKISRVVFGAWDPKMGAAGTVLNITAC 120

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
              +H PE+Y GI E+++  ++QDFF+  R
Sbjct: 121 NALNHQPEVYGGIMERKAESLLQDFFRGLR 150


>gi|210631978|ref|ZP_03297143.1| hypothetical protein COLSTE_01034 [Collinsella stercoris DSM 13279]
 gi|210159780|gb|EEA90751.1| hypothetical protein COLSTE_01034 [Collinsella stercoris DSM 13279]
          Length = 647

 Score =  105 bits (262), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 58/143 (40%), Positives = 82/143 (57%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FMS ALEEA+ AA   E+P+GAV V   ++I+RA NR    +D +AHAE  A+    R L
Sbjct: 11  FMSMALEEARAAASIGEVPIGAVVVHEGRVIARAHNRREADEDPSAHAEFAAMMEASRAL 70

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
            +  L    +YVTLEPC MCA  +  ARI R  +GA +PKGG +            +H+ 
Sbjct: 71  GRWRLTGCTVYVTLEPCLMCAGLMVNARIDRCVFGAYDPKGGAVGTLYDVSCDERLNHAF 130

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           ++ PG+ E     +++ FF+E R
Sbjct: 131 DVTPGVLEDECAAVLRAFFQELR 153


>gi|77361256|ref|YP_340831.1| tRNA-specific adenosine deaminase [Pseudoalteromonas haloplanktis
           TAC125]
 gi|76876167|emb|CAI87389.1| tRNA-specific adenosine deaminase [Pseudoalteromonas haloplanktis
           TAC125]
          Length = 168

 Score =  105 bits (261), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 56/145 (38%), Positives = 85/145 (58%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           N +M  AL  A+ A   +EIPVGA+ V +N++++   NR+    D +AHAE++A+R G +
Sbjct: 8   NYWMQQALTYAKQAEQLDEIPVGAILVKDNQLVAAGYNRSITDNDPSAHAEMMAVRKGGK 67

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
            L+   L +  LYVTLEPC+MCA  +  +RI+RL +GA++ K G   +          +H
Sbjct: 68  ALNNYRLIDCTLYVTLEPCSMCAGLLVHSRIKRLVFGAADAKTGSAGSIMNLLQEPKLNH 127

Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149
             E+  G+ E +   II  FFK RR
Sbjct: 128 QVEVLGGVLEGQCATIISGFFKRRR 152


>gi|149006819|ref|ZP_01830505.1| deoxyuridine 5'-triphosphate nucleotidohydrolase [Streptococcus
           pneumoniae SP18-BS74]
 gi|307126250|ref|YP_003878281.1| tRNA-specific adenosine deaminase [Streptococcus pneumoniae 670-6B]
 gi|147761734|gb|EDK68698.1| deoxyuridine 5'-triphosphate nucleotidohydrolase [Streptococcus
           pneumoniae SP18-BS74]
 gi|306483312|gb|ADM90181.1| tRNA-specific adenosine deaminase [Streptococcus pneumoniae 670-6B]
 gi|332076481|gb|EGI86943.1| cytidine and deoxycytidylate deaminase zinc-binding region family
           protein [Streptococcus pneumoniae GA17545]
          Length = 155

 Score =  105 bits (261), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 64/151 (42%), Positives = 85/151 (56%), Gaps = 4/151 (2%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +++  VFM  AL EA+ A   +EIP+G V V + +II R  N   EL+    HAEI+AI 
Sbjct: 5   LEEKEVFMREALREAEIALEHDEIPIGCVIVKDGEIIGRGHNAREELQRAVMHAEIMAIE 64

Query: 61  MGCRILSQEILPEVD--LYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
                LS+E    +D  L+VT+EPC MC+ AI LARI  + YGA N K GG  +     T
Sbjct: 65  DAN--LSEESWRLLDCTLFVTIEPCVMCSGAIGLARIPNVVYGAKNQKFGGAGSLYNILT 122

Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
               +H  E+  GI E     I+QDFF+ RR
Sbjct: 123 DERLNHRVEVEIGILEDECAAIMQDFFRNRR 153


>gi|169335874|ref|ZP_02863067.1| hypothetical protein ANASTE_02307 [Anaerofustis stercorihominis DSM
           17244]
 gi|169258612|gb|EDS72578.1| hypothetical protein ANASTE_02307 [Anaerofustis stercorihominis DSM
           17244]
          Length = 145

 Score =  105 bits (261), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 62/146 (42%), Positives = 87/146 (59%), Gaps = 5/146 (3%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           N +M  A++EA  +    ++PVGA+ V ++KIIS+A N   +  D TAHAEILAIR  C 
Sbjct: 2   NTYMLLAVQEALKSG--KDVPVGALIVKDDKIISKAHNEVIKNNDPTAHAEILAIREACS 59

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH- 123
           IL    L    +YVTLEPC MCA AI  A+I ++ YGA +   G    G+++  L     
Sbjct: 60  ILDSYNLSGCSIYVTLEPCPMCAGAIINAKIDKVVYGAMDMDYGAC--GSKYNLLEDNRA 117

Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149
            S E+Y GI E +   I++DFF++ R
Sbjct: 118 KSIEVYAGIEEDKCSVILKDFFEQIR 143


>gi|194335892|ref|YP_002017686.1| CMP/dCMP deaminase zinc-binding [Pelodictyon phaeoclathratiforme
           BU-1]
 gi|194308369|gb|ACF43069.1| CMP/dCMP deaminase zinc-binding [Pelodictyon phaeoclathratiforme
           BU-1]
          Length = 155

 Score =  105 bits (261), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 58/143 (40%), Positives = 80/143 (55%), Gaps = 1/143 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNN-KIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  A  EA  A  R E+PVGAV + +N  +I R  N+   L D TAHAE++A+      L
Sbjct: 8   MELAFREAIKAFERKEVPVGAVVLDSNGHVIGRGYNQVEALCDSTAHAEMIALTSAMATL 67

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
             + L +  L VTLEPC MCA AI  A++ R+ +GA +PK G              +H P
Sbjct: 68  GSKYLNDCTLAVTLEPCPMCAGAIVNAKVGRVIFGAYDPKMGAAGTVMNVTGSRQLNHQP 127

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E++ GI E + R ++QDFF+E R
Sbjct: 128 EVFGGIMENKCRNLLQDFFRELR 150


>gi|163753582|ref|ZP_02160705.1| putative cytosine/adenosine deaminase [Kordia algicida OT-1]
 gi|161325796|gb|EDP97122.1| putative cytosine/adenosine deaminase [Kordia algicida OT-1]
          Length = 151

 Score =  105 bits (261), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 56/145 (38%), Positives = 84/145 (57%), Gaps = 6/145 (4%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           N FM  AL+EA+ A  + E+PVGAV V++N++I+R  N    L DVTAHAE+ AI     
Sbjct: 10  NYFMKKALQEAEMAFEKGEVPVGAVIVIDNRVIARGHNLTETLNDVTAHAEMQAITAAAN 69

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
            L  + L    LYVTLEPC MCA A+  ++I  + YGA + + G I+  T+       H 
Sbjct: 70  FLGGKYLKRCTLYVTLEPCQMCAGALYWSQISNIVYGARDEERGCIKLNTKL------HP 123

Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149
              +  G+  + + Q+++ FF ++R
Sbjct: 124 KTVMKGGVLAEEASQLLKRFFIQKR 148


>gi|145629986|ref|ZP_01785768.1| hypothetical protein CGSHi22421_08043 [Haemophilus influenzae
           R3021]
 gi|144984267|gb|EDJ91690.1| hypothetical protein CGSHi22421_08043 [Haemophilus influenzae
           R3021]
          Length = 159

 Score =  105 bits (261), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 62/143 (43%), Positives = 82/143 (57%), Gaps = 1/143 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  ALE A  A +  EIPVGAV V +   II    N +    D TAHAEI+A+R G + +
Sbjct: 1   MRYALELADKAEVLGEIPVGAVLVDDAGNIIGEGWNLSIVQSDPTAHAEIIALRNGAKNI 60

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L    LYVTLEPCTMCA AI  +RI+RL +GAS+ K G I +   F+     +H+ 
Sbjct: 61  QNYRLLNSTLYVTLEPCTMCAGAILHSRIKRLVFGASDYKTGAIGSRFHFFDDYKMNHTL 120

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           EI  G+  +   Q +  FF++RR
Sbjct: 121 EITSGVLAEECSQKLSTFFQKRR 143


>gi|313848259|emb|CBY17260.1| putative cytidine/deoxycytidylate deaminase family protein
           [Chlamydophila psittaci RD1]
 gi|328914938|gb|AEB55771.1| cytidine/deoxycytidylate deaminase family protein [Chlamydophila
           psittaci 6BC]
          Length = 157

 Score =  105 bits (261), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 59/149 (39%), Positives = 84/149 (56%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           ++K   FM+ AL+EA+ A   +E+PVG V V +NKII+R  N   +L+D TAHAEIL I 
Sbjct: 3   IEKDIFFMNQALKEARQAYDEDEVPVGCVIVKDNKIIARGHNTTEKLQDPTAHAEILCIG 62

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              + L    L +  LY TLEPC MCA AI  ARIRR+ + A + + G   +    +   
Sbjct: 63  AAAQYLENWRLVDTVLYCTLEPCLMCAGAIQQARIRRIVWAAPDLRLGAGGSWINVFKEK 122

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
              H  E   GI  + + Q+++ FF  +R
Sbjct: 123 HPFHQVECCSGICREDAEQLMKQFFIGKR 151


>gi|312884996|ref|ZP_07744685.1| tRNA-specific adenosine deaminase [Vibrio caribbenthicus ATCC
           BAA-2122]
 gi|309367328|gb|EFP94891.1| tRNA-specific adenosine deaminase [Vibrio caribbenthicus ATCC
           BAA-2122]
          Length = 156

 Score =  105 bits (261), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 55/142 (38%), Positives = 79/142 (55%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  A+E A  A    E+PVGA+ V + +II+   NR+    D TAHAEI  +R   +IL 
Sbjct: 1   MRRAIELAHKAEQEGEVPVGALLVKDGEIIAEGWNRSISTHDATAHAEIEVLRKAGKILE 60

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
              L +  LYVTLEPC MCA A+  +R++R+ +GA + K G   +    +     +H  +
Sbjct: 61  NYRLNDTTLYVTLEPCPMCAGALLHSRVKRIVFGAFDKKTGAAGSVLNLFEHQAAYHYAD 120

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
           I  G+ E + R  +Q FFK RR
Sbjct: 121 IEKGVLEHQCRTQLQSFFKRRR 142


>gi|110803707|ref|YP_697380.1| cytidine/deoxycytidylate deaminase family protein [Clostridium
           perfringens SM101]
 gi|110684208|gb|ABG87578.1| cytidine/deoxycytidylate deaminase family protein [Clostridium
           perfringens SM101]
          Length = 143

 Score =  105 bits (261), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 59/143 (41%), Positives = 84/143 (58%), Gaps = 1/143 (0%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
            +S ALEEA+ A  + E+PVGAV V N +II+RA N    LKD TAHAEILAIR  C  L
Sbjct: 1   MLSLALEEAEKAREKGEVPVGAVIVKNGEIIARAHNLKETLKDPTAHAEILAIREACNKL 60

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
           +   L   ++YVTLEPC MCA AI  +R+ ++Y G  +   G   +          ++  
Sbjct: 61  NNWRLHGCEMYVTLEPCPMCAGAILQSRLSKIYIGTFDDTTGAAGSVVNILQNHNLNYFL 120

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+    ++ +  +I+ +FFK+RR
Sbjct: 121 EVVWE-NDDKCSKILTNFFKDRR 142


>gi|168187922|ref|ZP_02622557.1| tRNA-specific adenosine deaminase [Clostridium botulinum C str.
           Eklund]
 gi|169294234|gb|EDS76367.1| tRNA-specific adenosine deaminase [Clostridium botulinum C str.
           Eklund]
          Length = 147

 Score =  105 bits (261), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 64/152 (42%), Positives = 88/152 (57%), Gaps = 9/152 (5%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           MKK   FM  AL+EA+ A  ++E+PVGAV V N +II+ A N    L D TAHAE+LAI+
Sbjct: 1   MKKK--FMDIALDEAKLAMEKDEVPVGAVIVRNGEIIASAHNLRETLNDPTAHAEMLAIK 58

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKG---GGIENGTQFY 117
               +L    L E ++YVTLEPC MCA AI  +RIR++Y G  +P     G + N T+  
Sbjct: 59  KASSVLKNWRLNECEMYVTLEPCPMCAGAIIQSRIRKIYIGTIDPCAGCCGSVLNLTENI 118

Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
            L T           ++ R  +I+ +FFK +R
Sbjct: 119 YLNTALG----VKWFNDNRCSEILINFFKSKR 146


>gi|194018067|ref|ZP_03056672.1| tRNA-specific adenosine deaminase [Bacillus pumilus ATCC 7061]
 gi|194010259|gb|EDW19836.1| tRNA-specific adenosine deaminase [Bacillus pumilus ATCC 7061]
          Length = 158

 Score =  105 bits (261), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 54/149 (36%), Positives = 82/149 (55%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M +   FM  A+ EA  A    E+P+GA+ V++++I+SRA N     +   AHAE+LAI 
Sbjct: 1   MTRDEQFMQEAISEALKAEQIGEVPIGAIIVVDDQIVSRAHNLRETEQRSIAHAELLAID 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
             C+      L +  LYVTLEPC MCA AI L+R++++ +GA +PKGG            
Sbjct: 61  EACKTTGSWRLEDAVLYVTLEPCPMCAGAIVLSRVKKVVFGAYDPKGGCAGTLMNLLDDE 120

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  E+  G+ E    +++  FF+  R
Sbjct: 121 RFNHQSEVIGGVLENECGELLSQFFRNLR 149


>gi|149369606|ref|ZP_01889458.1| putative cytosine/adenosine deaminase [unidentified eubacterium
           SCB49]
 gi|149357033|gb|EDM45588.1| putative cytosine/adenosine deaminase [unidentified eubacterium
           SCB49]
          Length = 152

 Score =  105 bits (261), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 57/143 (39%), Positives = 82/143 (57%), Gaps = 6/143 (4%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  A +EA+ A  + EIP+GAV V +NKII+RA N    L DVTAHAE+ AI      L
Sbjct: 13  FMKRAFQEAETAYSQGEIPIGAVIVADNKIIARAHNLTETLNDVTAHAEMQAITAAANYL 72

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
             + L    LYVT+EPC MCA A+  ++I  + YGA + + G +E GT+       H   
Sbjct: 73  GGKYLKGCTLYVTIEPCQMCAGALYWSQISNVVYGARDEQRGCLEMGTKL------HPKT 126

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           ++  G+  +    +++ FF E+R
Sbjct: 127 KMTGGVLAEECATLLKRFFIEKR 149


>gi|329961864|ref|ZP_08299878.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Bacteroides fluxus YIT 12057]
 gi|328531304|gb|EGF58148.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Bacteroides fluxus YIT 12057]
          Length = 144

 Score =  105 bits (261), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 58/143 (40%), Positives = 78/143 (54%), Gaps = 5/143 (3%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  AL EAQ A  R E+PVGAV V  ++II+RA N    L DVTAHAE+ AI      L
Sbjct: 6   YMKQALLEAQKAGERGEVPVGAVVVCKDRIIARAHNLTETLTDVTAHAEMQAITAAASTL 65

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
             + L E  LYVT+EPC MCA AI+ A+  +L +GA + K      G Q Y     H   
Sbjct: 66  GGKYLNECALYVTVEPCVMCAGAIAWAQTGKLVFGAEDEK-----RGYQRYAPQALHPKT 120

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
            +  G+       ++++FF  +R
Sbjct: 121 MVVKGVLADECAALMKNFFAAKR 143


>gi|332883068|gb|EGK03352.1| hypothetical protein HMPREF9456_01989 [Dysgonomonas mossii DSM
           22836]
          Length = 148

 Score =  105 bits (261), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 52/145 (35%), Positives = 82/145 (56%), Gaps = 5/145 (3%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           + +M  AL EA+ A  + E+P+GAV V   +II+R  N    L DVTAHAE+ AI     
Sbjct: 9   DYYMRQALNEARQAFDKGEVPIGAVVVCKGRIIARGHNLTETLTDVTAHAEMQAITAAAN 68

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
           +L  + L +  LYVT+EPC MCA  +  ++I ++ YGA + K      G   ++ +  H 
Sbjct: 69  VLGGKYLTDCILYVTIEPCPMCAGGLLWSQISKIVYGAKDEK-----KGYSVFSPSILHP 123

Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149
             E+  G+ E     ++++FFK++R
Sbjct: 124 KTEVVSGVMEDECASLMKEFFKQKR 148


>gi|169351621|ref|ZP_02868559.1| hypothetical protein CLOSPI_02401 [Clostridium spiroforme DSM 1552]
 gi|169291843|gb|EDS73976.1| hypothetical protein CLOSPI_02401 [Clostridium spiroforme DSM 1552]
          Length = 148

 Score =  105 bits (261), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 60/144 (41%), Positives = 82/144 (56%), Gaps = 4/144 (2%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  A +EA     ++E+PVGAV V NN++IS A N        TAHAEILAI   C+ L
Sbjct: 7   FMEIAYQEALKCLEKDEVPVGAVIVKNNEVISCAHNLRETTNLATAHAEILAINEACKKL 66

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL-ATCHHS 125
               L E  LYVTLEPC MC+ AI  +RI+++ +GA   +   +   T  Y      +H 
Sbjct: 67  ESWYLDECTLYVTLEPCVMCSGAIINSRIKKVVFGAFENRWLAL---TSIYNCNFPVNHR 123

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
           PEI  GI   +  +II+++FK +R
Sbjct: 124 PEIVTGILGDKCSKIIKEYFKIKR 147


>gi|168217743|ref|ZP_02643368.1| cytidine/deoxycytidylate deaminase family protein [Clostridium
           perfringens NCTC 8239]
 gi|182380212|gb|EDT77691.1| cytidine/deoxycytidylate deaminase family protein [Clostridium
           perfringens NCTC 8239]
          Length = 143

 Score =  105 bits (261), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 59/143 (41%), Positives = 84/143 (58%), Gaps = 1/143 (0%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
            +S ALEEA+ A  + E+PVGAV V N +II+RA N    LKD TAHAEILAIR  C  L
Sbjct: 1   MLSLALEEAEKAREKGEVPVGAVIVKNGEIIARAHNLKETLKDPTAHAEILAIREACNKL 60

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
           +   L   ++YVTLEPC MCA AI  +R+ ++Y G  +   G   +          ++  
Sbjct: 61  NNWRLNGCEMYVTLEPCPMCAGAILQSRLSKIYIGTFDDTTGAAGSVVNILQNHNLNYFL 120

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+    ++++  +I+  FFK+RR
Sbjct: 121 EVVWE-NDEKCSKILTKFFKDRR 142


>gi|168206176|ref|ZP_02632181.1| cytidine/deoxycytidylate deaminase family protein [Clostridium
           perfringens E str. JGS1987]
 gi|170662306|gb|EDT14989.1| cytidine/deoxycytidylate deaminase family protein [Clostridium
           perfringens E str. JGS1987]
          Length = 143

 Score =  105 bits (261), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 59/143 (41%), Positives = 84/143 (58%), Gaps = 1/143 (0%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
            +S ALEEA+ A  + E+PVGAV V N +II+RA N    LKD TAHAEILAIR  C  L
Sbjct: 1   MLSLALEEAEKAREKGEVPVGAVIVKNGEIIARAHNLKETLKDPTAHAEILAIREACNKL 60

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
           +   L   ++YVTLEPC MCA AI  +R+ ++Y G  +   G   +          ++  
Sbjct: 61  NNWRLHGCEMYVTLEPCPMCAGAILQSRLSKIYIGTFDDTTGAAGSVVNILQNHNLNYFL 120

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+    ++++  +I+  FFK+RR
Sbjct: 121 EVVWE-NDEKCSKILTKFFKDRR 142


>gi|154684537|ref|YP_001419698.1| YaaJ [Bacillus amyloliquefaciens FZB42]
 gi|154350388|gb|ABS72467.1| YaaJ [Bacillus amyloliquefaciens FZB42]
          Length = 160

 Score =  105 bits (261), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 53/143 (37%), Positives = 84/143 (58%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  A++EA+ A  + E+P+GAV VL+++I++RA N     +   AHAE+LAI   CR L
Sbjct: 6   YMREAIKEAKKAEAKGEVPIGAVLVLHDEIVARAHNLRETEQRSLAHAEMLAIDEACRKL 65

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  LYVTLEPC MCA A+ L+R+ ++ +GA +PKGG              +H  
Sbjct: 66  GTWRLEDAVLYVTLEPCPMCAGAVVLSRVDKVVFGAFDPKGGCTGTLMNLLQEERFNHQA 125

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+  G+  +   +++  FF++ R
Sbjct: 126 EVVSGVLGEECGEMLSAFFRKLR 148


>gi|304398612|ref|ZP_07380484.1| CMP/dCMP deaminase zinc-binding [Pantoea sp. aB]
 gi|304353823|gb|EFM18198.1| CMP/dCMP deaminase zinc-binding [Pantoea sp. aB]
          Length = 155

 Score =  105 bits (261), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 57/142 (40%), Positives = 81/142 (57%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  AL  A+ A  ++E+PVGAV V N+++I    NR     D TAHAEI+A+R G ++L 
Sbjct: 1   MRHALGLARRAWEQSEVPVGAVLVQNDQVIGEGWNRPIGQHDPTAHAEIMALRQGGKVLE 60

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
              L +  LYVTLEPC MCA A+  +RI RL YGA + K G   +          +H  E
Sbjct: 61  NYRLLDTTLYVTLEPCVMCAGAMVHSRITRLVYGAHDVKSGAAGSLLDVLGHPGMNHQIE 120

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
           ++ G+  +    ++ DFF+ RR
Sbjct: 121 LHSGVLAEECAAMLSDFFRMRR 142


>gi|257899803|ref|ZP_05679456.1| cytidine/deoxycytidylate deaminase [Enterococcus faecium Com15]
 gi|293571142|ref|ZP_06682180.1| tRNA-specific adenosine deaminase [Enterococcus faecium E980]
 gi|257837715|gb|EEV62789.1| cytidine/deoxycytidylate deaminase [Enterococcus faecium Com15]
 gi|291608755|gb|EFF38039.1| tRNA-specific adenosine deaminase [Enterococcus faecium E980]
          Length = 165

 Score =  105 bits (261), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 52/139 (37%), Positives = 76/139 (54%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  AL EA+ A + +E+P+GAV VL  ++I +  N     +D T HAE+LAI+  C  +
Sbjct: 14  WMRLALAEAKKAEVLHEVPIGAVVVLEGEVIGKGYNLRETTQDATTHAEMLAIKEACEKV 73

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L    L+VTLEPC MC+ A+ L+R+  +Y+GA +PKGG              +H  
Sbjct: 74  GSWRLENASLFVTLEPCPMCSGAMILSRVAEVYFGAYDPKGGTAGTLMNLLEDERFNHQA 133

Query: 127 EIYPGISEQRSRQIIQDFF 145
            +  GI E     I+ DFF
Sbjct: 134 YVEGGILEDECGMILTDFF 152


>gi|253996102|ref|YP_003048166.1| CMP/dCMP deaminase zinc-binding [Methylotenera mobilis JLW8]
 gi|253982781|gb|ACT47639.1| CMP/dCMP deaminase zinc-binding [Methylotenera mobilis JLW8]
          Length = 165

 Score =  105 bits (261), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 59/148 (39%), Positives = 78/148 (52%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           ++   FM+ AL  A+ AAL  E+PVGA+ V +  II R  N    L D +AHAEI A+R 
Sbjct: 10  EQDQAFMNIALTLAKQAALAGEVPVGAIVVKDGVIIGRGSNAPITLHDPSAHAEIQAMRD 69

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
             + L    L +  LYVTLEPC MCA AI  ARI +L YGAS+ K G   +         
Sbjct: 70  AAQHLGNYRLVDCTLYVTLEPCAMCAGAIQHARIAKLVYGASDQKTGACGSVVNLMAEQK 129

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H   +  G+       ++  FF ERR
Sbjct: 130 LNHHTTVASGLLADECGMMLSSFFSERR 157


>gi|227894597|ref|ZP_04012402.1| nucleoside deaminase [Lactobacillus ultunensis DSM 16047]
 gi|227863588|gb|EEJ71009.1| nucleoside deaminase [Lactobacillus ultunensis DSM 16047]
          Length = 174

 Score =  105 bits (261), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 52/141 (36%), Positives = 84/141 (59%), Gaps = 1/141 (0%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           +M  A+++A+ A  + E+P+GAV V  + K+I    NR    +D T HAE++AI+  C+ 
Sbjct: 15  YMQLAMDQAKIAEQQGEVPIGAVIVDPDGKVIGTGYNRRELDEDSTQHAEMIAIKEACKN 74

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           L    L +  L+VTLEPC MCA AI  +RI+ +Y+GA +PK G   +    +T+   +H 
Sbjct: 75  LGMWRLIDCSLFVTLEPCPMCAGAIINSRIKDVYFGALDPKAGACGSVVDLFTVDKFNHH 134

Query: 126 PEIYPGISEQRSRQIIQDFFK 146
           P    G+   +  Q+++DFF+
Sbjct: 135 PRAIRGLYRDQCAQMLKDFFR 155


>gi|197124086|ref|YP_002136037.1| CMP/dCMP deaminase zinc-binding [Anaeromyxobacter sp. K]
 gi|196173935|gb|ACG74908.1| CMP/dCMP deaminase zinc-binding [Anaeromyxobacter sp. K]
          Length = 183

 Score =  105 bits (261), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 57/138 (41%), Positives = 79/138 (57%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  AL  A+ AA R E+PVGAVA+   +++ R  N     +D TAHAE+LAI+   R L 
Sbjct: 30  MQEALGLAREAAARGEVPVGAVALFEGRVVGRGANAREAARDPTAHAELLAIQEAARTLG 89

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
           +  L  V + VTLEPC MCA A+ LARI RL YGAS+PK G   +          +H   
Sbjct: 90  RWRLTGVTVVVTLEPCAMCAGAMVLARIDRLVYGASDPKAGCTGSLQDLSADPRLNHRFP 149

Query: 128 IYPGISEQRSRQIIQDFF 145
           +  G+  + S ++++ FF
Sbjct: 150 VERGLLAEESGELLRAFF 167


>gi|328952357|ref|YP_004369691.1| CMP/dCMP deaminase zinc-binding protein [Desulfobacca acetoxidans
           DSM 11109]
 gi|328452681|gb|AEB08510.1| CMP/dCMP deaminase zinc-binding protein [Desulfobacca acetoxidans
           DSM 11109]
          Length = 167

 Score =  104 bits (260), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 57/144 (39%), Positives = 82/144 (56%), Gaps = 1/144 (0%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           +M  A+ EA+ A+   E+PVGAV +    KII +  N+     D +AHAEI+A+R     
Sbjct: 23  YMCLAIGEAKKASSLQEVPVGAVVIDKAGKIIGQGHNQPIASHDPSAHAEIVALRQASAC 82

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
                LP+  +YVTLEPC MC  A+  AR+RRL YGA +PKGG   +  +       +H 
Sbjct: 83  SRNYRLPDCTMYVTLEPCIMCIGAVLQARLRRLVYGADDPKGGACVSLYRLPEDTRLNHR 142

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
            E+  G+ E   R ++Q+FF+ RR
Sbjct: 143 LEVVRGVCEAECRTLLQEFFRRRR 166


>gi|227552392|ref|ZP_03982441.1| nucleoside deaminase [Enterococcus faecium TX1330]
 gi|257888367|ref|ZP_05668020.1| cytidine/deoxycytidylate deaminase [Enterococcus faecium 1,141,733]
 gi|257896743|ref|ZP_05676396.1| cytidine/deoxycytidylate deaminase [Enterococcus faecium Com12]
 gi|293378075|ref|ZP_06624251.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Enterococcus faecium PC4.1]
 gi|227178480|gb|EEI59452.1| nucleoside deaminase [Enterococcus faecium TX1330]
 gi|257824421|gb|EEV51353.1| cytidine/deoxycytidylate deaminase [Enterococcus faecium 1,141,733]
 gi|257833308|gb|EEV59729.1| cytidine/deoxycytidylate deaminase [Enterococcus faecium Com12]
 gi|292643330|gb|EFF61464.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Enterococcus faecium PC4.1]
          Length = 171

 Score =  104 bits (260), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 51/139 (36%), Positives = 77/139 (55%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  AL EA+ A + +E+P+GAV VL  ++I +  N     +D T HAE+LAI+  C  +
Sbjct: 14  WMRLALAEAKKAEVLHEVPIGAVVVLEGEVIGKGYNLRETTQDATTHAEMLAIKEACEKV 73

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L    L+VTLEPC MC+ A+ L+R+  +Y+GA +PKGG              +H  
Sbjct: 74  GSWRLENASLFVTLEPCPMCSGAMILSRVAEVYFGAYDPKGGTAGTLMNLLEDERFNHQA 133

Query: 127 EIYPGISEQRSRQIIQDFF 145
            +  GI E    +++ DFF
Sbjct: 134 YVEGGILEDECGRVLTDFF 152


>gi|227431250|ref|ZP_03913304.1| tRNA-adenosine deaminase [Leuconostoc mesenteroides subsp. cremoris
           ATCC 19254]
 gi|227353012|gb|EEJ43184.1| tRNA-adenosine deaminase [Leuconostoc mesenteroides subsp. cremoris
           ATCC 19254]
          Length = 168

 Score =  104 bits (260), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 60/145 (41%), Positives = 80/145 (55%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           + FM  AL EA+ A    E+P+GAV V  N++I+RA N     +  TAHAE+LAI     
Sbjct: 13  DYFMQEALNEAKIAQSEGEVPIGAVIVYENQMIARAHNHREADQLATAHAELLAIESANT 72

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
            L    L    L+VTLEPC MCA AI  ARI  +YYGA++PKGG   +          +H
Sbjct: 73  KLKSWRLENTALFVTLEPCIMCAGAIINARIPVVYYGANDPKGGATRSLYSLLEDNRLNH 132

Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149
             ++Y GI  + S  ++Q FF   R
Sbjct: 133 MVKVYEGIRGEESGLLLQRFFSNIR 157


>gi|238917935|ref|YP_002931452.1| hypothetical protein EUBELI_02023 [Eubacterium eligens ATCC 27750]
 gi|238873295|gb|ACR73005.1| Hypothetical protein EUBELI_02023 [Eubacterium eligens ATCC 27750]
          Length = 176

 Score =  104 bits (260), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 57/143 (39%), Positives = 77/143 (53%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  A+ +A+ A   NE+P+G V V   K+I R  NR    K    HAEI AI+   R +
Sbjct: 20  YMKQAITQAKKAYKLNEVPIGCVIVYEGKVIGRGYNRRNTDKTSLGHAEITAIKKASRYM 79

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
           +   L    LYVTLEPC MCA AI  ARI R+  G+ NPK G   +      + T +H  
Sbjct: 80  NDWRLENCTLYVTLEPCQMCAGAIVQARIPRVVIGSMNPKAGCAGSILNILQIPTFNHQC 139

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           EI  G+ E+   +++  FFKE R
Sbjct: 140 EITKGVCEEECSEMLTTFFKELR 162


>gi|313889859|ref|ZP_07823501.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Streptococcus pseudoporcinus SPIN 20026]
 gi|313121904|gb|EFR45001.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Streptococcus pseudoporcinus SPIN 20026]
          Length = 174

 Score =  104 bits (260), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 58/143 (40%), Positives = 80/143 (55%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  AL+EA+ + ++ EIP+G V V + KII R  N   EL     HAEI+AI       
Sbjct: 12  FMREALKEAEKSLVKAEIPIGCVIVKDGKIIGRGHNAREELNQAIMHAEIMAINEANAHE 71

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L E  L+VT+EPC MC+ AI LARI  + +GA N K GG  +  Q  T    +H  
Sbjct: 72  KNWRLLETSLFVTIEPCVMCSGAIGLARIPHVVFGAPNQKFGGAGSLYQILTDQRLNHRV 131

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+  G+ E    +++QDFF++ R
Sbjct: 132 ELESGLLEAECAKMMQDFFRQGR 154


>gi|294084707|ref|YP_003551465.1| CMP/dCMP deaminase, zinc-binding protein [Candidatus
           Puniceispirillum marinum IMCC1322]
 gi|292664280|gb|ADE39381.1| CMP/dCMP deaminase, zinc-binding protein [Candidatus
           Puniceispirillum marinum IMCC1322]
          Length = 149

 Score =  104 bits (260), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 53/128 (41%), Positives = 77/128 (60%), Gaps = 3/128 (2%)

Query: 24  IPVGAVAVLNNKIISRAGNRNRELKDVTA--HAEILAIRMGCRILSQEILPEVDLYVTLE 81
           +PV A  V  +  +  A   NR ++D  A  HAEILAI           L   DL+VTLE
Sbjct: 23  VPVAAAIVAPDGTVV-ALESNRMVRDGNALHHAEILAINAALAKTGGSRLDGYDLWVTLE 81

Query: 82  PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141
           PC MCA AI+ AR+RR+Y+ A + K G +E+G +++   +C+H PE+Y G+SEQ +  ++
Sbjct: 82  PCAMCAGAIAHARLRRVYFAAYDAKAGAVESGIRYFDHPSCNHRPEVYGGLSEQAASIML 141

Query: 142 QDFFKERR 149
            DFF  +R
Sbjct: 142 SDFFAAKR 149


>gi|319891528|ref|YP_004148403.1| tRNA-specific adenosine-34 deaminase [Staphylococcus
           pseudintermedius HKU10-03]
 gi|317161224|gb|ADV04767.1| tRNA-specific adenosine-34 deaminase [Staphylococcus
           pseudintermedius HKU10-03]
          Length = 157

 Score =  104 bits (260), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 57/149 (38%), Positives = 81/149 (54%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M     +MS ALEEA+ AA + E+P+GAV V N KII+RA N     +  TAHAE LA+ 
Sbjct: 1   MTSHQYYMSIALEEAKKAAKKGEVPIGAVVVKNGKIIARAHNLRETDQSPTAHAEHLAME 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
                L    L    LYVTLEPC MCA  I ++R+  + +GA +PKGG + +       +
Sbjct: 61  RAAAQLGTWRLEGCTLYVTLEPCVMCAGTIVMSRVDTVVFGAMDPKGGCVGSLMNLVQDS 120

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H   +  G+      +I++ FF+  R
Sbjct: 121 RMNHRASVVSGVLAYSCGEILRQFFRALR 149


>gi|291562950|emb|CBL41766.1| Cytosine/adenosine deaminases [butyrate-producing bacterium SS3/4]
          Length = 186

 Score =  104 bits (260), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 58/143 (40%), Positives = 79/143 (55%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  A+ +A+ AA   E+P+G V V + +II+R  NR    K+V AHAEI+A+R  CRIL
Sbjct: 16  YMKEAIRQAKKAAALKEVPIGCVIVYDGRIIARGYNRRTVDKNVLAHAEIIAMRRACRIL 75

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L    +YVTLEPC MCA AI  ARI ++  G  NPK G   +          +H  
Sbjct: 76  GDWRLEGCTMYVTLEPCPMCAGAIVQARIPKVVIGCMNPKAGCAGSVLDMLHEDGFNHQV 135

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E   G+      Q+++DFFK  R
Sbjct: 136 ETEVGLLGDECSQMLKDFFKALR 158


>gi|291532344|emb|CBL05457.1| tRNA-adenosine deaminase [Megamonas hypermegale ART12/1]
          Length = 159

 Score =  104 bits (260), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 59/144 (40%), Positives = 84/144 (58%), Gaps = 3/144 (2%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNK--IISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M  AL EA+ A    EIP+GA+ + ++K  IISR  N   +  D TAHAEI+AIR  C  
Sbjct: 13  MKEALIEAKKAFAIGEIPIGAI-ICDDKGNIISRGHNLREKTFDATAHAEIVAIRKACTK 71

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           L    L ++ LYVT+EPC MCA AI  +R++RL YGA++ + GG E+          +H 
Sbjct: 72  LQNWRLSDLTLYVTVEPCPMCAGAIFSSRLKRLVYGATDWRAGGCESVFNIVNNHWLNHQ 131

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
            +I  G+ E     +++ FF+ RR
Sbjct: 132 TQIRAGVLEDECSLLVKKFFQTRR 155


>gi|315173580|gb|EFU17597.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Enterococcus faecalis TX1346]
          Length = 173

 Score =  104 bits (260), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 56/143 (39%), Positives = 80/143 (55%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  A+ EA+ A   +E+P+GAV V   +II R  N     ++ TAHAE+ AI+  CR +
Sbjct: 16  FMREAIAEAKKAEGLDEVPIGAVIVRQGEIIGRGHNLREARQEATAHAEMYAIQEACRGI 75

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L E  L+VTLEPC MC+ A+ LARI  +YYGA++PK G              +H  
Sbjct: 76  ENWRLEETQLFVTLEPCPMCSGAMLLARIPEVYYGATDPKAGTAGTLMNLLEDERFNHVA 135

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
            +  G+ E+  R ++  FFK+ R
Sbjct: 136 YVEAGVLEEECRLLLVQFFKKLR 158


>gi|149908700|ref|ZP_01897361.1| putative zinc-binding protein [Moritella sp. PE36]
 gi|149808242|gb|EDM68181.1| putative zinc-binding protein [Moritella sp. PE36]
          Length = 182

 Score =  104 bits (260), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 56/143 (39%), Positives = 81/143 (56%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  A+  A  A   +E+PVGAV VLN+KII    N++    D TAHAEI+A+R   + +
Sbjct: 28  WMQHAIMLAGKAEAIDEVPVGAVIVLNDKIIGEGWNQSIISHDATAHAEIMALREAGKTV 87

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  LYVTLEPC+MCA A+  +R++RL YGA + K G   +       A  +H  
Sbjct: 88  ENYRLIDATLYVTLEPCSMCAGAMVHSRVKRLVYGAVDLKTGAAGSVFNLVEHAQLNHQI 147

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+  G+    +  ++  FFK RR
Sbjct: 148 EVRSGVFASETGALLSQFFKRRR 170


>gi|227824625|ref|ZP_03989457.1| CMP/dCMP deaminase [Acidaminococcus sp. D21]
 gi|226905124|gb|EEH91042.1| CMP/dCMP deaminase [Acidaminococcus sp. D21]
          Length = 153

 Score =  104 bits (260), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 56/127 (44%), Positives = 75/127 (59%)

Query: 23  EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEP 82
           EIPVGA+ V + ++I+R  NR     D TAHAEIL IR  C  L +  L +  LYVT+EP
Sbjct: 27  EIPVGAILVQDGRVIARNHNRRERAHDATAHAEILVIREACEKLRRWRLADSTLYVTMEP 86

Query: 83  CTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQ 142
           C MCA AI  ARI R+ +GAS+   G   +  Q     + H +  I  GI  +R ++I+Q
Sbjct: 87  CPMCAGAIYNARIGRVVFGASDSVAGACGSLFQIPLHPSLHANTIIKAGIEAERCKKILQ 146

Query: 143 DFFKERR 149
           +FF  RR
Sbjct: 147 EFFTRRR 153


>gi|206578910|ref|YP_002237098.1| tRNA-specific adenosine deaminase [Klebsiella pneumoniae 342]
 gi|206567968|gb|ACI09744.1| tRNA-specific adenosine deaminase [Klebsiella pneumoniae 342]
          Length = 180

 Score =  104 bits (260), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 58/143 (40%), Positives = 78/143 (54%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  AL  A+ A    E+PVGAV V NN++I    NR     D TAHAEI+A+R G  +L
Sbjct: 22  WMRHALTLAKRAWKEGEVPVGAVLVYNNQVIGEGWNRPIGRHDPTAHAEIMALRQGGLVL 81

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  LYVTLEPC MCA A+  +RI RL +GA + K G   +          +H  
Sbjct: 82  QNYRLIDATLYVTLEPCVMCAGAMVHSRIARLVFGARDAKTGAAGSLIDVLHHPGMNHRV 141

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           EI  G+  +    ++ DFF+ RR
Sbjct: 142 EISEGVLAESCSTMLSDFFRWRR 164


>gi|197294746|ref|YP_001799287.1| Cytidine/deoxycytidylate deaminase family protein [Candidatus
           Phytoplasma australiense]
 gi|171854073|emb|CAM12046.1| Cytidine/deoxycytidylate deaminase family protein [Candidatus
           Phytoplasma australiense]
          Length = 166

 Score =  104 bits (260), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 57/147 (38%), Positives = 82/147 (55%), Gaps = 1/147 (0%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
           K   FM  A +EA  A L+ E+PVGAV VLNN+II+RA N  ++      HAE LA+   
Sbjct: 6   KNLFFMKAAFQEAYKAYLKKEVPVGAVVVLNNQIIARAHNNRKQKNLFFGHAEFLALIKA 65

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
            + L    L    +YVTLEPC MCA A+  A ++ +YYGA++ K G I++    + L   
Sbjct: 66  NKKLKNRRLTNSSVYVTLEPCLMCAGALIQAGVKHVYYGAADSKTGCIKSLLTSFELPLP 125

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           H     + G   Q S  +++ FF++ R
Sbjct: 126 HKVIA-HSGFLAQESSDLLKTFFQQLR 151


>gi|218961251|ref|YP_001741026.1| Cytosine/adenosine deaminase [Candidatus Cloacamonas
           acidaminovorans]
 gi|167729908|emb|CAO80820.1| Cytosine/adenosine deaminase [Candidatus Cloacamonas
           acidaminovorans]
          Length = 155

 Score =  104 bits (260), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 59/146 (40%), Positives = 86/146 (58%), Gaps = 5/146 (3%)

Query: 6   VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           +FM  A+ EA+ A   +EIPVGA+ V NN II +  NR+R+L +  AH E L I    +I
Sbjct: 11  LFMQEAIAEAKKAFTEDEIPVGALLVKNNTIILKEHNRSRQLANPLAHCEKLLID---KI 67

Query: 66  LSQE--ILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123
           L+ E   L +  LYVTLEPC MCA  I L++I  + YGA +PK G + +        + +
Sbjct: 68  LTSEPGFLYDYTLYVTLEPCLMCAGMIILSKIGTVVYGAKDPKAGVVGSLYNVLNDKSFN 127

Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149
           H P +  GI EQ    ++++FF ++R
Sbjct: 128 HHPVVIGGILEQECAFLLEEFFHKKR 153


>gi|124266938|ref|YP_001020942.1| tRNA-adenosine deaminase [Methylibium petroleiphilum PM1]
 gi|124259713|gb|ABM94707.1| tRNA-adenosine deaminase [Methylibium petroleiphilum PM1]
          Length = 205

 Score =  104 bits (260), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 55/148 (37%), Positives = 84/148 (56%), Gaps = 4/148 (2%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLN----NKIISRAGNRNRELKDVTAHAEIL 57
           +K    M  AL++AQNA L  E+PVGAV V      +++++   NR     D TAHAEI+
Sbjct: 9   RKDEAAMRLALDQAQNAWLVGEVPVGAVIVREVDGVHQVVATGYNRPITTHDPTAHAEIV 68

Query: 58  AIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFY 117
           A+R   ++L    LP+ +LYVTLEPC MCA A+  AR +R+ Y A++PK G   +    +
Sbjct: 69  ALRHAAQLLGNYRLPDCELYVTLEPCAMCAMALVHARFKRVVYAAADPKTGAAGSVIDLF 128

Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDFF 145
                +H   +  G+      Q++++FF
Sbjct: 129 AQRQLNHHTAVQGGVLADTCGQLLREFF 156


>gi|126697581|ref|YP_001086478.1| putative cytosine/adenosine deaminase [Clostridium difficile 630]
 gi|254973665|ref|ZP_05270137.1| putative cytosine/adenosine deaminase [Clostridium difficile
           QCD-66c26]
 gi|255091056|ref|ZP_05320534.1| putative cytosine/adenosine deaminase [Clostridium difficile CIP
           107932]
 gi|255099172|ref|ZP_05328149.1| putative cytosine/adenosine deaminase [Clostridium difficile
           QCD-63q42]
 gi|255312710|ref|ZP_05354293.1| putative cytosine/adenosine deaminase [Clostridium difficile
           QCD-76w55]
 gi|255515470|ref|ZP_05383146.1| putative cytosine/adenosine deaminase [Clostridium difficile
           QCD-97b34]
 gi|255648562|ref|ZP_05395464.1| putative cytosine/adenosine deaminase [Clostridium difficile
           QCD-37x79]
 gi|255654097|ref|ZP_05399506.1| putative cytosine/adenosine deaminase [Clostridium difficile
           QCD-23m63]
 gi|260681784|ref|YP_003213069.1| putative cytosine/adenosine deaminase [Clostridium difficile CD196]
 gi|260685381|ref|YP_003216514.1| putative cytosine/adenosine deaminase [Clostridium difficile
           R20291]
 gi|296452478|ref|ZP_06894177.1| cytidine/deoxycytidylate deaminase [Clostridium difficile NAP08]
 gi|296878246|ref|ZP_06902256.1| cytidine/deoxycytidylate deaminase [Clostridium difficile NAP07]
 gi|306518691|ref|ZP_07405038.1| putative cytosine/adenosine deaminase [Clostridium difficile
           QCD-32g58]
 gi|115249018|emb|CAJ66829.1| transfer RNA specific adenosine deaminase [Clostridium difficile]
 gi|260207947|emb|CBA60067.1| putative cytosine/adenosine deaminase [Clostridium difficile CD196]
 gi|260211397|emb|CBE01470.1| putative cytosine/adenosine deaminase [Clostridium difficile
           R20291]
 gi|296258684|gb|EFH05580.1| cytidine/deoxycytidylate deaminase [Clostridium difficile NAP08]
 gi|296430754|gb|EFH16591.1| cytidine/deoxycytidylate deaminase [Clostridium difficile NAP07]
          Length = 151

 Score =  104 bits (259), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 57/147 (38%), Positives = 86/147 (58%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
           + + +M  AL+EA  A  + E P+GA+ V +N+II+RA N    LKD TAHAEILAI+  
Sbjct: 2   ESSFYMKEALKEAYKAYNKKETPIGAIIVKDNQIIARAHNLTETLKDSTAHAEILAIKQA 61

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
              L    L + DLYVT+EPC MC+ AI  +RI++L  G  + K   IE   +F      
Sbjct: 62  SEKLGGWRLTDCDLYVTMEPCIMCSGAIVNSRIKKLIIGTRHVKNSYIEKQHEFKLDYFN 121

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +++ ++   + ++    I+Q+FFK  R
Sbjct: 122 NNNVKVAFDVLQEECSIILQEFFKALR 148


>gi|323465305|gb|ADX77458.1| tRNA-specific adenosine deaminase [Staphylococcus pseudintermedius
           ED99]
          Length = 157

 Score =  104 bits (259), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 57/149 (38%), Positives = 81/149 (54%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M     +MS ALEEA+ AA + E+P+GAV V N KII+RA N     +  TAHAE LA+ 
Sbjct: 1   MTSHQYYMSIALEEARKAAKKGEVPIGAVVVKNGKIIARAHNLRETDQSPTAHAEHLAME 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
                L    L    LYVTLEPC MCA  I ++R+  + +GA +PKGG + +       +
Sbjct: 61  RAAAQLGTWRLEGCTLYVTLEPCVMCAGTIVMSRVDTVVFGAMDPKGGCVGSLMNLVQDS 120

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H   +  G+      +I++ FF+  R
Sbjct: 121 RMNHRASVVSGVLAYSCGEILRQFFRALR 149


>gi|56459694|ref|YP_154975.1| cytosine/adenosine deaminase putative [Idiomarina loihiensis L2TR]
 gi|56178704|gb|AAV81426.1| Cytosine/adenosine deaminase putative [Idiomarina loihiensis L2TR]
          Length = 150

 Score =  104 bits (259), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 54/142 (38%), Positives = 82/142 (57%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  ALE A+ A   +E+PVGAV V+++KI+    N+   L D +AHAE  AIR   + + 
Sbjct: 1   MQRALELAEQAQNADEVPVGAVLVMDDKIVGEGYNQVISLSDPSAHAEAQAIRSAGQAID 60

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
              L    LYVTLEPC MCA  I+ AR++RL +GA++P+ G      +    A+ +H  +
Sbjct: 61  NYRLVNATLYVTLEPCAMCAGLITHARVKRLVFGATDPRTGATGTAIEVINHASMNHKVD 120

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
           +  G+  +    I++ FF+ RR
Sbjct: 121 VESGVLAEECGDILRRFFRARR 142


>gi|145632283|ref|ZP_01788018.1| hypothetical protein CGSHi3655_07509 [Haemophilus influenzae 3655]
 gi|145634073|ref|ZP_01789784.1| hypothetical protein CGSHiAA_08515 [Haemophilus influenzae PittAA]
 gi|229844039|ref|ZP_04464180.1| hypothetical protein CGSHi6P18H1_06366 [Haemophilus influenzae
           6P18H1]
 gi|144987190|gb|EDJ93720.1| hypothetical protein CGSHi3655_07509 [Haemophilus influenzae 3655]
 gi|145268517|gb|EDK08510.1| hypothetical protein CGSHiAA_08515 [Haemophilus influenzae PittAA]
 gi|229813033|gb|EEP48721.1| hypothetical protein CGSHi6P18H1_06366 [Haemophilus influenzae
           6P18H1]
          Length = 173

 Score =  104 bits (259), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 62/143 (43%), Positives = 82/143 (57%), Gaps = 1/143 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNK-IISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  ALE A  A    EIPVGAV V + + II    N +    D TAHAEI+A+R G + +
Sbjct: 15  MRYALELADKAEALGEIPVGAVLVDDARNIIGEGWNLSIVQSDPTAHAEIIALRNGAKNI 74

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L    LYVTLEPCTMCA AI  +RI+RL +GAS+ K G I +   F+     +H+ 
Sbjct: 75  QNYRLLNSTLYVTLEPCTMCAGAILHSRIKRLVFGASDYKTGAIGSRFHFFNDYKMNHTL 134

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           EI  G+  +   Q +  FF++RR
Sbjct: 135 EITSGVLAEECSQKLSTFFQKRR 157


>gi|256961376|ref|ZP_05565547.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis Merz96]
 gi|293383665|ref|ZP_06629574.1| tRNA-specific adenosine deaminase [Enterococcus faecalis R712]
 gi|293387223|ref|ZP_06631781.1| tRNA-specific adenosine deaminase [Enterococcus faecalis S613]
 gi|312906213|ref|ZP_07765225.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Enterococcus faecalis DAPTO 512]
 gi|312909559|ref|ZP_07768414.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Enterococcus faecalis DAPTO 516]
 gi|256951872|gb|EEU68504.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis Merz96]
 gi|291079001|gb|EFE16365.1| tRNA-specific adenosine deaminase [Enterococcus faecalis R712]
 gi|291083361|gb|EFE20324.1| tRNA-specific adenosine deaminase [Enterococcus faecalis S613]
 gi|310627859|gb|EFQ11142.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Enterococcus faecalis DAPTO 512]
 gi|311290232|gb|EFQ68788.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Enterococcus faecalis DAPTO 516]
          Length = 173

 Score =  104 bits (259), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 56/145 (38%), Positives = 80/145 (55%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
            +FM  A+ EA+ A    E+P+GAV V   +II R  N     ++ TAHAE+ AI+  CR
Sbjct: 14  EIFMREAIAEAKKAEGLAEVPIGAVIVRQGEIIGRGHNLREARQEATAHAEMYAIQEACR 73

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
            +    L E  L+VTLEPC MC+ A+ LARI  +YYGA++PK G              +H
Sbjct: 74  GIENWRLEETQLFVTLEPCPMCSGAMLLARIPEVYYGATDPKAGTAGTLMNLLEDERFNH 133

Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149
              +  G+ E+  R ++  FFK+ R
Sbjct: 134 VAYVEAGVLEEECRLLLVQFFKKLR 158


>gi|153834810|ref|ZP_01987477.1| tRNA-specific adenosine deaminase [Vibrio harveyi HY01]
 gi|148868738|gb|EDL67812.1| tRNA-specific adenosine deaminase [Vibrio harveyi HY01]
          Length = 177

 Score =  104 bits (259), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 56/147 (38%), Positives = 80/147 (54%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
           +  +FM  A+E A+ A    E+PVGAV V + +II+   NR+    D TAHAEI  +R  
Sbjct: 9   QDELFMRRAMELAEQAEAEGEVPVGAVLVKDGEIIAEGWNRSICAHDATAHAEIQTLRKA 68

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
            + L    L +  LYVTLEPC MCA A+  +R++R+ YGA + K G        +     
Sbjct: 69  GKALGNYRLLDTTLYVTLEPCPMCAGALLHSRVKRVVYGAPDLKAGAAGTVLNLFESQAA 128

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H   +  G+ E+  R  +Q FFK RR
Sbjct: 129 YHYATVENGLLEEECRSQLQAFFKRRR 155


>gi|68249492|ref|YP_248604.1| hypothetical protein NTHI1073 [Haemophilus influenzae 86-028NP]
 gi|145636963|ref|ZP_01792627.1| preprotein translocase subunit SecA [Haemophilus influenzae PittHH]
 gi|145638273|ref|ZP_01793883.1| preprotein translocase subunit SecA [Haemophilus influenzae PittII]
 gi|68057691|gb|AAX87944.1| conserved hypothetical protein [Haemophilus influenzae 86-028NP]
 gi|145269821|gb|EDK09760.1| preprotein translocase subunit SecA [Haemophilus influenzae PittHH]
 gi|145272602|gb|EDK12509.1| preprotein translocase subunit SecA [Haemophilus influenzae PittII]
 gi|309751427|gb|ADO81411.1| tRNA-specific adenosine deaminase [Haemophilus influenzae R2866]
 gi|309973597|gb|ADO96798.1| tRNA-specific adenosine deaminase [Haemophilus influenzae R2846]
          Length = 173

 Score =  104 bits (259), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 62/143 (43%), Positives = 82/143 (57%), Gaps = 1/143 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNK-IISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  ALE A  A    EIPVGAV V + + II    N +    D TAHAEI+A+R G + +
Sbjct: 15  MRYALELADKAEALGEIPVGAVLVDDARNIIGEGWNLSIVQSDPTAHAEIIALRNGAKNI 74

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L    LYVTLEPCTMCA AI  +RI+RL +GAS+ K G I +   F+     +H+ 
Sbjct: 75  QNYRLLNSTLYVTLEPCTMCAGAILHSRIKRLVFGASDYKTGAIGSRFHFFDDYKMNHTL 134

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           EI  G+  +   Q +  FF++RR
Sbjct: 135 EITSGVLAEECSQKLSTFFQKRR 157


>gi|290508256|ref|ZP_06547627.1| tRNA-specific adenosine deaminase yfhC [Klebsiella sp. 1_1_55]
 gi|289777650|gb|EFD85647.1| tRNA-specific adenosine deaminase yfhC [Klebsiella sp. 1_1_55]
          Length = 180

 Score =  104 bits (259), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 58/143 (40%), Positives = 78/143 (54%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  AL  A+ A    E+PVGAV V NN++I    NR     D TAHAEI+A+R G  +L
Sbjct: 22  WMRHALTLAKRAWEEGEVPVGAVLVYNNQVIGEGWNRPIGRHDPTAHAEIMALRQGGLVL 81

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  LYVTLEPC MCA A+  +RI RL +GA + K G   +          +H  
Sbjct: 82  QNYRLIDATLYVTLEPCVMCAGAMVHSRIARLVFGARDAKTGAAGSLIDVLHHPGMNHRV 141

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           EI  G+  +    ++ DFF+ RR
Sbjct: 142 EISEGVLAESCSTMLSDFFRWRR 164


>gi|226952955|ref|ZP_03823419.1| deaminase [Acinetobacter sp. ATCC 27244]
 gi|294650537|ref|ZP_06727894.1| cytosine deaminase [Acinetobacter haemolyticus ATCC 19194]
 gi|226836276|gb|EEH68659.1| deaminase [Acinetobacter sp. ATCC 27244]
 gi|292823534|gb|EFF82380.1| cytosine deaminase [Acinetobacter haemolyticus ATCC 19194]
          Length = 174

 Score =  104 bits (259), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 60/144 (41%), Positives = 79/144 (54%), Gaps = 1/144 (0%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  A E+A  AA + EIPVGAV V  +KII    N    L D +AHAEI A+RM C+ +
Sbjct: 16  WMQFAYEQAALAAEQGEIPVGAVIVSQSKIIGAGYNAPILLSDPSAHAEIQALRMACQSI 75

Query: 67  SQEILPE-VDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
               LPE   LYVTLEPCTMC  A+  ARI+R+ +    PK G + +  Q       +H 
Sbjct: 76  QNYRLPEDATLYVTLEPCTMCVGALIHARIQRVVFATPEPKAGSLVSARQLLDSGYYNHK 135

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
                G  + +    + DFFK+RR
Sbjct: 136 FVFEHGCMQAKCSAQLSDFFKQRR 159


>gi|260581733|ref|ZP_05849530.1| ComE operon protein 2 [Haemophilus influenzae NT127]
 gi|319897607|ref|YP_004135804.1| tRNA-specific adenosine deaminase [Haemophilus influenzae F3031]
 gi|260095326|gb|EEW79217.1| ComE operon protein 2 [Haemophilus influenzae NT127]
 gi|317433113|emb|CBY81487.1| tRNA-specific adenosine deaminase [Haemophilus influenzae F3031]
          Length = 173

 Score =  104 bits (259), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 62/143 (43%), Positives = 82/143 (57%), Gaps = 1/143 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNK-IISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  ALE A  A    EIPVGAV V + + II    N +    D TAHAEI+A+R G + +
Sbjct: 15  MRYALELADKAEALGEIPVGAVLVDDARNIIGEGWNLSIVQSDPTAHAEIIALRNGAKNI 74

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L    LYVTLEPCTMCA AI  +RI+RL +GAS+ K G I +   F+     +H+ 
Sbjct: 75  QNYRLLNSTLYVTLEPCTMCAGAILHSRIKRLVFGASDYKTGAIGSRFHFFDDYKMNHTL 134

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           EI  G+  +   Q +  FF++RR
Sbjct: 135 EITSGVLAEECSQKLSTFFQKRR 157


>gi|78224707|ref|YP_386454.1| tRNA-adenosine deaminase [Geobacter metallireducens GS-15]
 gi|78195962|gb|ABB33729.1| tRNA-adenosine deaminase [Geobacter metallireducens GS-15]
          Length = 171

 Score =  104 bits (259), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 57/149 (38%), Positives = 80/149 (53%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           ++  + +M  AL EA+ AA R+E+P+GAV V N  +I R  N     +D +AHAE++AIR
Sbjct: 9   VRDDSYWMGKALREAEKAAARDEVPIGAVVVRNGAVIGRGHNLRENKQDPSAHAEMIAIR 68

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              R L    L    LYVTLEPC MC  AI LAR  R+ +G  +PKGG   +        
Sbjct: 69  QAARRLGCWRLTGCVLYVTLEPCLMCMGAIILARFDRVVFGCHDPKGGAAGSLYDLSDDR 128

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  E+   + E+    I+  FF + R
Sbjct: 129 RLNHRVELTSRVREEECSAILSGFFADLR 157


>gi|46446282|ref|YP_007647.1| hypothetical protein pc0648 [Candidatus Protochlamydia amoebophila
           UWE25]
 gi|46399923|emb|CAF23372.1| conserved hypothetical protein [Candidatus Protochlamydia
           amoebophila UWE25]
          Length = 166

 Score =  104 bits (259), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 60/145 (41%), Positives = 83/145 (57%), Gaps = 4/145 (2%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  AL+EA  A   +E+PVGAV V +  II+R  N+   LKD TAHAE+L +  G   L
Sbjct: 16  FMLEALKEAWKAFKADEVPVGAVLVKDKHIIARGFNQVEMLKDATAHAEMLCLTAGESAL 75

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH--H 124
               L E  LY T+EPC+MCA A+ L RI+ L +GA + + G   NG+        H  H
Sbjct: 76  DNWRLSETTLYCTVEPCSMCAGAMFLTRIKTLVWGAPDLRHGA--NGSWVNLFDEIHPTH 133

Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149
           + EI   + +    QI++DFF+ +R
Sbjct: 134 AIEIRKHVLQNPCAQILKDFFQLQR 158


>gi|291287100|ref|YP_003503916.1| CMP/dCMP deaminase zinc-binding protein [Denitrovibrio acetiphilus
           DSM 12809]
 gi|290884260|gb|ADD67960.1| CMP/dCMP deaminase zinc-binding protein [Denitrovibrio acetiphilus
           DSM 12809]
          Length = 158

 Score =  104 bits (259), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 54/143 (37%), Positives = 78/143 (54%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM+ A++EA+ AA + E+P+GAV V    +I R  N+    K    HAEI+AI      +
Sbjct: 11  FMNEAVKEAEGAAAKGEVPIGAVVVSEGAVIGRGSNKKNSGKSALNHAEIIAIEDASSKI 70

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L E  LYVTLEPC MCA AI  ARIR + +G + PK GG+ +  + + +   +H  
Sbjct: 71  GDWRLDECTLYVTLEPCLMCAGAIIHARIRNVIFGTTEPKFGGVISLARTFDIDGLNHKV 130

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
               G+       +++ FFKE R
Sbjct: 131 SYKGGLHSDEISAMMKQFFKEVR 153


>gi|254425304|ref|ZP_05039022.1| Cytidine and deoxycytidylate deaminase zinc-binding region domain
           protein [Synechococcus sp. PCC 7335]
 gi|196192793|gb|EDX87757.1| Cytidine and deoxycytidylate deaminase zinc-binding region domain
           protein [Synechococcus sp. PCC 7335]
          Length = 162

 Score =  104 bits (259), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 56/136 (41%), Positives = 79/136 (58%), Gaps = 1/136 (0%)

Query: 15  AQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPE 73
           AQ A    E+PV A+ V  +N++++ A NR    +D TAHAE+LAIR   + L    L +
Sbjct: 8   AQEAGTAGEVPVAAIIVGPDNQLVASAANRKERDQDPTAHAEVLAIRAAAKHLGDWHLNQ 67

Query: 74  VDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGIS 133
             LYVTLEPC MCA AI  AR+  L YG S+PK G I +        + +H   +  G+ 
Sbjct: 68  CTLYVTLEPCPMCAGAIIHARLGLLVYGTSDPKTGAIRSVLNLPDGPSSNHKLVVIGGVL 127

Query: 134 EQRSRQIIQDFFKERR 149
           E   +Q +QD+FK++R
Sbjct: 128 ETVCKQQLQDWFKQKR 143


>gi|270264772|ref|ZP_06193037.1| hypothetical protein SOD_i01890 [Serratia odorifera 4Rx13]
 gi|270041455|gb|EFA14554.1| hypothetical protein SOD_i01890 [Serratia odorifera 4Rx13]
          Length = 168

 Score =  104 bits (259), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 59/143 (41%), Positives = 78/143 (54%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  AL  AQ A    E+PVGA+ VL+N++I    NR     D TAHAEI+A+R G  +L
Sbjct: 9   WMRQALLLAQRAQEEGEVPVGALLVLDNQVIGEGWNRPIGRHDPTAHAEIMALRQGGAVL 68

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L    LYVTLEPC MCA A+  +RIRRL YGA++ K G   +          +H  
Sbjct: 69  QNYRLLNATLYVTLEPCVMCAGAMVHSRIRRLVYGAADVKTGAAGSLVDILRHPGMNHQV 128

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           EI  G+        + +FF+ RR
Sbjct: 129 EIASGVLADECAATLSNFFRLRR 151


>gi|253731164|ref|ZP_04865329.1| deaminase [Staphylococcus aureus subsp. aureus USA300_TCH959]
 gi|253725129|gb|EES93858.1| deaminase [Staphylococcus aureus subsp. aureus USA300_TCH959]
          Length = 156

 Score =  104 bits (259), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 53/143 (37%), Positives = 82/143 (57%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM+ A++EA+ AA   E+P+GA+   ++++I+RA N    L+  TAHAE +AI    ++L
Sbjct: 7   FMTLAIKEAKKAAQLGEVPIGAIITKDDEVIARAHNLRETLQQPTAHAEHIAIERAAKVL 66

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L    LYVTLEPC MCA  I ++RI R+ YGA +PKGG   +       +  +H  
Sbjct: 67  GSWRLEGCTLYVTLEPCVMCAGTIVMSRIPRVVYGADDPKGGCSGSLMNLLQQSNFNHRA 126

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
            +  G+ ++    ++  FFK  R
Sbjct: 127 IVDKGVLKEACSTLLTTFFKNLR 149


>gi|170078671|ref|YP_001735309.1| cytidine and deoxycytidylate deaminase zinc-binding protein
           [Synechococcus sp. PCC 7002]
 gi|169886340|gb|ACB00054.1| Cytidine and deoxycytidylate deaminase zinc-binding protein
           [Synechococcus sp. PCC 7002]
          Length = 158

 Score =  104 bits (259), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 54/142 (38%), Positives = 85/142 (59%), Gaps = 1/142 (0%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           +M  A+  A+ A    EIPVGAV V   N+ ++++GNR  + +D TAHAE+L IR   ++
Sbjct: 13  WMQKAIALAKVAGQSGEIPVGAVIVDGKNQCLAQSGNRKEKTQDPTAHAEMLVIRAASQM 72

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
                L +  LYVTLEPC MCA A+  +R++++ YGA +PK G + +   F      +HS
Sbjct: 73  RQDWHLQDCTLYVTLEPCPMCAGAMIHSRLKQVVYGADDPKTGALRSMANFPDAPFSNHS 132

Query: 126 PEIYPGISEQRSRQIIQDFFKE 147
             +  GI+    RQ++Q++F+ 
Sbjct: 133 FPVLGGIAAMECRQLLQNWFQH 154


>gi|56418551|ref|YP_145869.1| hypothetical protein GK0016 [Geobacillus kaustophilus HTA426]
 gi|261417515|ref|YP_003251197.1| CMP/dCMP deaminase zinc-binding protein [Geobacillus sp. Y412MC61]
 gi|297528391|ref|YP_003669666.1| CMP/dCMP deaminase zinc-binding protein [Geobacillus sp. C56-T3]
 gi|319765173|ref|YP_004130674.1| CMP/dCMP deaminase zinc-binding protein [Geobacillus sp. Y412MC52]
 gi|56378393|dbj|BAD74301.1| hypothetical conserved protein [Geobacillus kaustophilus HTA426]
 gi|261373972|gb|ACX76715.1| CMP/dCMP deaminase zinc-binding protein [Geobacillus sp. Y412MC61]
 gi|297251643|gb|ADI25089.1| CMP/dCMP deaminase zinc-binding protein [Geobacillus sp. C56-T3]
 gi|317110039|gb|ADU92531.1| CMP/dCMP deaminase zinc-binding protein [Geobacillus sp. Y412MC52]
          Length = 165

 Score =  104 bits (259), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 56/149 (37%), Positives = 78/149 (52%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M     +M  A+EEA+ A    E+P+GAV V + ++I+RA N     +   AHAEILAI 
Sbjct: 1   MNTDEYYMRLAMEEAKKAEQIGEVPIGAVIVQDGRVIARAHNLRETEQRAIAHAEILAID 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
             CR      L    LYVTLEPC MCA AI L+RI R+ +GA +PKGG           +
Sbjct: 61  EACRATGSWRLERATLYVTLEPCAMCAGAIVLSRIERVVFGAFDPKGGCAGTLMNLLQES 120

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  ++  G+       ++  FF+  R
Sbjct: 121 RFNHQVKVVSGVLADECGSLLSQFFRRLR 149


>gi|182682990|ref|YP_001834737.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus
           pneumoniae CGSP14]
 gi|303255537|ref|ZP_07341594.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus
           pneumoniae BS455]
 gi|303260656|ref|ZP_07346619.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus
           pneumoniae SP-BS293]
 gi|303260820|ref|ZP_07346769.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus
           pneumoniae SP14-BS292]
 gi|303263147|ref|ZP_07349070.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus
           pneumoniae BS397]
 gi|303267493|ref|ZP_07353343.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus
           pneumoniae BS457]
 gi|303269460|ref|ZP_07355227.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus
           pneumoniae BS458]
 gi|182628324|gb|ACB89272.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus
           pneumoniae CGSP14]
 gi|301800992|emb|CBW33654.1| putative deaminase [Streptococcus pneumoniae INV200]
 gi|302597498|gb|EFL64587.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus
           pneumoniae BS455]
 gi|302637657|gb|EFL68143.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus
           pneumoniae SP14-BS292]
 gi|302638186|gb|EFL68658.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus
           pneumoniae SP-BS293]
 gi|302640994|gb|EFL71374.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus
           pneumoniae BS458]
 gi|302642968|gb|EFL73265.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus
           pneumoniae BS457]
 gi|302646920|gb|EFL77144.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus
           pneumoniae BS397]
          Length = 155

 Score =  104 bits (259), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 63/151 (41%), Positives = 85/151 (56%), Gaps = 4/151 (2%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +++  VFM  AL EA+ A   +EIP+G V V + +II R  N   EL+    HAEI+AI 
Sbjct: 5   LEEKEVFMREALREAEIALEHDEIPIGCVIVKDGEIIGRGHNAREELQRAVMHAEIMAIE 64

Query: 61  MGCRILSQEILPEVD--LYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
                LS+E    +D  L+VT+EPC MC+ AI LARI  + YGA N K G   +     T
Sbjct: 65  DAN--LSEESWRLLDCTLFVTIEPCVMCSGAIGLARIPNVVYGAKNQKFGAAGSLYDILT 122

Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
               +H  E+  GI E +   I+QDFF+ RR
Sbjct: 123 DERLNHRVEVEIGILEDKCAAIMQDFFRNRR 153


>gi|118580679|ref|YP_901929.1| CMP/dCMP deaminase [Pelobacter propionicus DSM 2379]
 gi|118503389|gb|ABK99871.1| tRNA-adenosine deaminase [Pelobacter propionicus DSM 2379]
          Length = 181

 Score =  104 bits (259), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 55/129 (42%), Positives = 77/129 (59%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  A+ EA  A  R+E+P+G V V +N+II+R  N     +D +AHAE++AIR   R L
Sbjct: 18  WMQRAIAEAGKARSRDEVPIGCVIVRDNRIIARGHNLRESSQDPSAHAEMIAIRKAARKL 77

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
           S   L +  LYVTLEPCTMC  AI L+RI R+ +G  +PKGG   +          +H  
Sbjct: 78  SSWRLLDTTLYVTLEPCTMCMGAIILSRIPRVVFGCLDPKGGAAGSLYDLSNDPRLNHRV 137

Query: 127 EIYPGISEQ 135
           E+ PG+ E+
Sbjct: 138 ELLPGVLER 146


>gi|229845957|ref|ZP_04466069.1| hypothetical protein CGSHi7P49H1_03883 [Haemophilus influenzae
           7P49H1]
 gi|229810961|gb|EEP46678.1| hypothetical protein CGSHi7P49H1_03883 [Haemophilus influenzae
           7P49H1]
          Length = 159

 Score =  104 bits (259), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 62/143 (43%), Positives = 82/143 (57%), Gaps = 1/143 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNK-IISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  ALE A  A    EIPVGAV V + + II    N +    D TAHAEI+A+R G + +
Sbjct: 1   MRYALELADKAEALGEIPVGAVLVDDARNIIGEGWNLSIVQSDPTAHAEIIALRNGAKNI 60

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L    LYVTLEPCTMCA AI  +RI+RL +GAS+ K G I +   F+     +H+ 
Sbjct: 61  QNYRLLNSTLYVTLEPCTMCAGAILHSRIKRLVFGASDYKTGAIGSRFHFFDDYKMNHTL 120

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           EI  G+  +   Q +  FF++RR
Sbjct: 121 EITSGVLAEECSQKLSTFFQKRR 143


>gi|148826450|ref|YP_001291203.1| preprotein translocase subunit SecA [Haemophilus influenzae PittEE]
 gi|148716610|gb|ABQ98820.1| preprotein translocase subunit SecA [Haemophilus influenzae PittEE]
          Length = 161

 Score =  104 bits (259), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 62/143 (43%), Positives = 82/143 (57%), Gaps = 1/143 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNK-IISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  ALE A  A    EIPVGAV V + + II    N +    D TAHAEI+A+R G + +
Sbjct: 15  MRYALELADKAEALGEIPVGAVLVDDARNIIGEGWNLSIVQSDPTAHAEIIALRNGAKNI 74

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L    LYVTLEPCTMCA AI  +RI+RL +GAS+ K G I +   F+     +H+ 
Sbjct: 75  QNYRLLNSTLYVTLEPCTMCAGAILHSRIKRLVFGASDYKTGAIGSRFHFFDDYKMNHTL 134

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           EI  G+  +   Q +  FF++RR
Sbjct: 135 EITSGVLAEECSQKLSTFFQKRR 157


>gi|301169624|emb|CBW29225.1| tRNA-specific adenosine deaminase [Haemophilus influenzae 10810]
          Length = 173

 Score =  104 bits (259), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 62/143 (43%), Positives = 81/143 (56%), Gaps = 1/143 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  ALE A  A    EIPVGAV V +   II    N +    D TAHAEI+A+R G + +
Sbjct: 15  MRYALELADKAEALGEIPVGAVLVDDAGNIIGEGWNLSIVQSDPTAHAEIIALRNGAKNI 74

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L    LYVTLEPCTMCA AI  +RI+RL +GAS+ K G I +   F+     +H+ 
Sbjct: 75  QNYRLLNSTLYVTLEPCTMCAGAILHSRIKRLVFGASDYKTGAIGSRFHFFDDYKMNHTL 134

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           EI  G+  +   Q +  FF++RR
Sbjct: 135 EITSGVLAEECSQKLSTFFQKRR 157


>gi|295692237|ref|YP_003600847.1| tRNA-specific adenosine deaminase [Lactobacillus crispatus ST1]
 gi|295030343|emb|CBL49822.1| tRNA-specific adenosine deaminase [Lactobacillus crispatus ST1]
          Length = 166

 Score =  104 bits (259), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 52/144 (36%), Positives = 84/144 (58%), Gaps = 1/144 (0%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNREL-KDVTAHAEILAIRMGCRI 65
           +M  A+++A+ A  + E+P+GAV V  +  +   G   REL +D T HAE++AI+  C  
Sbjct: 10  YMQLAIDQAKEAEKQGEVPIGAVVVDPDGRVVGTGYNRRELDEDATQHAEMIAIKEACSK 69

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           L    L +  L+VTLEPC MCA AI  +RI+ +Y+GA +PK G   +    +++   +H 
Sbjct: 70  LGMWRLIDCSLFVTLEPCPMCAGAIINSRIKDVYFGALDPKAGACGSVVDLFSVEKFNHH 129

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
           P    G+   +  Q+++DFF+  R
Sbjct: 130 PHAIRGLYRDQCAQMLKDFFRAIR 153


>gi|256844520|ref|ZP_05550006.1| cytidine/deoxycytidylate deaminase [Lactobacillus crispatus
           125-2-CHN]
 gi|256849091|ref|ZP_05554524.1| cytidine/deoxycytidylate deaminase [Lactobacillus crispatus
           MV-1A-US]
 gi|262047573|ref|ZP_06020528.1| cytidine/deoxycytidylate deaminase [Lactobacillus crispatus
           MV-3A-US]
 gi|312977923|ref|ZP_07789669.1| cytidine/deoxycytidylate deaminase family protein [Lactobacillus
           crispatus CTV-05]
 gi|256613598|gb|EEU18801.1| cytidine/deoxycytidylate deaminase [Lactobacillus crispatus
           125-2-CHN]
 gi|256713867|gb|EEU28855.1| cytidine/deoxycytidylate deaminase [Lactobacillus crispatus
           MV-1A-US]
 gi|260572149|gb|EEX28714.1| cytidine/deoxycytidylate deaminase [Lactobacillus crispatus
           MV-3A-US]
 gi|310895230|gb|EFQ44298.1| cytidine/deoxycytidylate deaminase family protein [Lactobacillus
           crispatus CTV-05]
          Length = 166

 Score =  103 bits (258), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 52/144 (36%), Positives = 84/144 (58%), Gaps = 1/144 (0%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNREL-KDVTAHAEILAIRMGCRI 65
           +M  A+++A+ A  + E+P+GAV V  +  +   G   REL +D T HAE++AI+  C  
Sbjct: 10  YMQLAIDQAKEAEKQGEVPIGAVVVDPDGRVVGTGYNRRELDEDATQHAEMIAIKEACSK 69

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           L    L +  L+VTLEPC MCA AI  +RI+ +Y+GA +PK G   +    +++   +H 
Sbjct: 70  LGMWRLIDCSLFVTLEPCPMCAGAIINSRIKDVYFGALDPKAGACGSVVDLFSVEKFNHH 129

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
           P    G+   +  Q+++DFF+  R
Sbjct: 130 PHAIRGLYRDQCAQMLKDFFRAIR 153


>gi|118602884|ref|YP_904099.1| CMP/dCMP deaminase, zinc-binding [Candidatus Ruthia magnifica str.
           Cm (Calyptogena magnifica)]
 gi|118567823|gb|ABL02628.1| CMP/dCMP deaminase, zinc-binding protein [Candidatus Ruthia
           magnifica str. Cm (Calyptogena magnifica)]
          Length = 156

 Score =  103 bits (258), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 57/143 (39%), Positives = 82/143 (57%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M+ A+E+A+ A   NE+PVGA+ + NN++IS A N+     D TAHAEI  +R   + L
Sbjct: 11  WMTLAIEQAKQAQKVNEVPVGAILIQNNQLISSAYNQPISNNDPTAHAEIQLLRAAGKQL 70

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
           +   L +  LYVTLEPCTMC  AI  AR+  + +GA + K G   +          +HS 
Sbjct: 71  NNYRLYDTTLYVTLEPCTMCLGAIVHARVSYIVFGAYDQKSGVCGSCINLQNSQCFNHSI 130

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
            I  GI   + + ++Q FFK RR
Sbjct: 131 NIQGGILADQCKDLLQQFFKSRR 153


>gi|307710059|ref|ZP_07646503.1| tRNA-specific adenosine deaminase [Streptococcus mitis SK564]
 gi|307619039|gb|EFN98171.1| tRNA-specific adenosine deaminase [Streptococcus mitis SK564]
          Length = 155

 Score =  103 bits (258), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 61/149 (40%), Positives = 80/149 (53%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +++  VFM  AL EA+ A   +EIP+G V V + KII R  N   EL+    HAEI+AI 
Sbjct: 5   VEEKEVFMREALREAEIALEHDEIPIGCVIVKDGKIIGRGHNAREELQRAVMHAEIMAIE 64

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
                     L +  L+VT+EPC MC+ AI LARI  + YGA N K G   +     T  
Sbjct: 65  NANLREESWRLLDCTLFVTIEPCVMCSGAIGLARIPNVVYGAKNQKFGAAGSLYDILTDE 124

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  E+  GI E     I+QDFF+ RR
Sbjct: 125 RLNHRVEVETGILEDECAAIMQDFFRNRR 153


>gi|145628165|ref|ZP_01783966.1| preprotein translocase subunit SecA [Haemophilus influenzae
           22.1-21]
 gi|144979940|gb|EDJ89599.1| preprotein translocase subunit SecA [Haemophilus influenzae
           22.1-21]
          Length = 159

 Score =  103 bits (258), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 62/143 (43%), Positives = 81/143 (56%), Gaps = 1/143 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  ALE A  A    EIPVGAV V +   II    N +    D TAHAEI+A+R G + +
Sbjct: 1   MRYALELADKAEALGEIPVGAVLVDDAGNIIGEGWNLSIVQSDPTAHAEIIALRNGAKNI 60

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L    LYVTLEPCTMCA AI  +RI+RL +GAS+ K G I +   F+     +H+ 
Sbjct: 61  QNYRLLNSTLYVTLEPCTMCAGAILHSRIKRLVFGASDYKTGAIGSRFHFFDDYKMNHTL 120

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           EI  G+  +   Q +  FF++RR
Sbjct: 121 EITSGVLAEECSQKLSTFFQKRR 143


>gi|307152204|ref|YP_003887588.1| CMP/dCMP deaminase zinc-binding protein [Cyanothece sp. PCC 7822]
 gi|306982432|gb|ADN14313.1| CMP/dCMP deaminase zinc-binding protein [Cyanothece sp. PCC 7822]
          Length = 162

 Score =  103 bits (258), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 61/148 (41%), Positives = 80/148 (54%), Gaps = 1/148 (0%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           K   +MS A+  AQ AAL  ++PVGAV +    ++I+ A NR    +D TAHAEIL +R 
Sbjct: 15  KHQQWMSRAIVLAQQAALAGDVPVGAVILDREGRLIAEASNRKERDQDPTAHAEILVLRR 74

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
             +IL    L    LYVTLEPC MC  AI  ARI  L YG  +PK G I         + 
Sbjct: 75  ASQILKTWHLEACYLYVTLEPCPMCTGAIIQARIGLLVYGVDDPKTGTIRTVANLPDSSC 134

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H   +  GI E   R+ +Q +F +RR
Sbjct: 135 SNHRLSVLSGIMESACREQLQTWFAQRR 162


>gi|188996445|ref|YP_001930696.1| CMP/dCMP deaminase zinc-binding [Sulfurihydrogenibium sp. YO3AOP1]
 gi|188931512|gb|ACD66142.1| CMP/dCMP deaminase zinc-binding [Sulfurihydrogenibium sp. YO3AOP1]
          Length = 149

 Score =  103 bits (258), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 55/143 (38%), Positives = 85/143 (59%), Gaps = 1/143 (0%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           F+  A++EA+ A  +NE+PVGAV V + KIIS+A N+     +   HAEILAI   C+ L
Sbjct: 7   FIDQAVKEAEKALKKNEVPVGAVIVKDGKIISKAHNQRISKNNALYHAEILAIEKSCKKL 66

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  LY TLEPC MCA A+  ARI+++ + A + KGG + +    +       + 
Sbjct: 67  KTWRLDDAVLYTTLEPCLMCAGAVMQARIKKVVFCAKDEKGGAVLSKYTVFDDKKLPFNV 126

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E Y  I ++R  +++++FFK+ R
Sbjct: 127 E-YEYIPDERCSKLLKEFFKKLR 148


>gi|297566040|ref|YP_003685012.1| tRNA(Ile)-lysidine synthetase [Meiothermus silvanus DSM 9946]
 gi|296850489|gb|ADH63504.1| tRNA(Ile)-lysidine synthetase [Meiothermus silvanus DSM 9946]
          Length = 524

 Score =  103 bits (258), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 52/103 (50%), Positives = 67/103 (65%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  AL EA +A  R E+P+GAV V   K+I++AGN+  E +D TAHAE+LAIR     L
Sbjct: 383 FMRLALAEAHSAGGRGEVPIGAVLVRGEKVIAKAGNQVEEFQDATAHAELLAIRAALEAL 442

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109
            +++LP   LYVTLEPC MC  A+  A++ RL YG  N K G 
Sbjct: 443 GEKVLPGSTLYVTLEPCPMCYGAMLEAQVSRLVYGMENLKAGA 485


>gi|149176635|ref|ZP_01855247.1| cytosine deaminase [Planctomyces maris DSM 8797]
 gi|148844514|gb|EDL58865.1| cytosine deaminase [Planctomyces maris DSM 8797]
          Length = 171

 Score =  103 bits (258), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 55/143 (38%), Positives = 82/143 (57%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  A +EA+ A   +E+PVGAV V  ++II+ A N+   L D TAHAE++AI      L
Sbjct: 24  WMRYAYDEARAAFEEDEVPVGAVIVYQDRIIAAAHNQREMLSDPTAHAEMIAITQAAESL 83

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  LYVTLEPC MCA AI  +R+  + YG  + K G   +  Q  + A  +H  
Sbjct: 84  GSWRLSDCVLYVTLEPCPMCAGAIVQSRLPLVIYGTRDEKAGACHSLFQITSDARLNHQS 143

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
            +  G+ ++  R I+Q+FF+ +R
Sbjct: 144 TVISGVMQEECRGILQEFFRRKR 166


>gi|306828458|ref|ZP_07461653.1| tRNA-specific adenosine deaminase [Streptococcus mitis ATCC 6249]
 gi|304429257|gb|EFM32342.1| tRNA-specific adenosine deaminase [Streptococcus mitis ATCC 6249]
          Length = 155

 Score =  103 bits (258), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 63/145 (43%), Positives = 82/145 (56%), Gaps = 4/145 (2%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  AL EA+ A   +EIP+G V V + +IISR  N   EL+    HAEI+AI      L
Sbjct: 11  FMREALREAEIALEHDEIPIGCVIVKDGEIISRGHNAREELQRAVMHAEIMAIENAN--L 68

Query: 67  SQEILPEVD--LYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
           S+E    +D  L+VT+EPC MC+ AI LARI ++ YGA N K G   +     T    +H
Sbjct: 69  SEESWRLLDCTLFVTIEPCVMCSGAIGLARIPKVVYGAKNQKFGAAGSLYDILTDERLNH 128

Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149
             E+  GI E     I+QDFF+ RR
Sbjct: 129 RVEVETGILEDECAGIMQDFFRNRR 153


>gi|15902066|ref|NP_357616.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus
           pneumoniae R6]
 gi|116516620|ref|YP_815440.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus
           pneumoniae D39]
 gi|148987738|ref|ZP_01819201.1| adenylosuccinate synthetase [Streptococcus pneumoniae SP6-BS73]
 gi|15457551|gb|AAK98826.1| Conserved hypothetical protein [Streptococcus pneumoniae R6]
 gi|116077196|gb|ABJ54916.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus
           pneumoniae D39]
 gi|147926202|gb|EDK77275.1| adenylosuccinate synthetase [Streptococcus pneumoniae SP6-BS73]
          Length = 155

 Score =  103 bits (258), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 63/151 (41%), Positives = 84/151 (55%), Gaps = 4/151 (2%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +++  VFM  AL EA+ A   +EIP+G V V + +II R  N   EL+    HAEI+AI 
Sbjct: 5   LEEKEVFMREALREAEIALEHDEIPIGCVIVKDGEIIGRGHNAREELQRAVMHAEIMAIE 64

Query: 61  MGCRILSQEILPEVD--LYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
                LS+E    +D  L+VT+EPC MC+ AI LARI  + YGA N K G   +     T
Sbjct: 65  DAN--LSEESWRLLDCTLFVTIEPCVMCSGAIGLARIPNVVYGAKNQKFGAAGSLYDILT 122

Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
               +H  E+  GI E     I+QDFF+ RR
Sbjct: 123 DERLNHRVEVETGILEDECAAIMQDFFRNRR 153


>gi|67922696|ref|ZP_00516200.1| Cytidine/deoxycytidylate deaminase, zinc-binding region
           [Crocosphaera watsonii WH 8501]
 gi|67855478|gb|EAM50733.1| Cytidine/deoxycytidylate deaminase, zinc-binding region
           [Crocosphaera watsonii WH 8501]
          Length = 165

 Score =  103 bits (258), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 59/144 (40%), Positives = 81/144 (56%), Gaps = 1/144 (0%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNN-KIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           +M  AL   Q AA   ++PVGAV + +  K+I++  N   +  D TAHAEI+AIR   + 
Sbjct: 15  WMKQALNLGQEAAKAGDVPVGAVIIDSQGKLIAQGLNCKEQNHDPTAHAEIIAIRQATQK 74

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           L    L +  LYVTLEPC MCA AI  +R+  L YG  +PK G I +       A  +H 
Sbjct: 75  LHSWYLNKCTLYVTLEPCIMCAGAIIHSRLGLLVYGVDDPKSGTIRSVLNLPDSAASNHR 134

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
             +  GI E   RQ +QD+FK++R
Sbjct: 135 LSVLSGILEAECRQQLQDWFKQKR 158


>gi|237733437|ref|ZP_04563918.1| tRNA-adenosine deaminase [Mollicutes bacterium D7]
 gi|229383472|gb|EEO33563.1| tRNA-adenosine deaminase [Coprobacillus sp. D7]
          Length = 152

 Score =  103 bits (258), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 58/149 (38%), Positives = 83/149 (55%), Gaps = 2/149 (1%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M +   FM  A +EA      +E+PVGAV V + KII+   N     K  TAHAEI+AI 
Sbjct: 1   MDQDLEFMEIAYQEALKCLDMDEVPVGAVIVKDGKIIACGRNLRETSKRATAHAEIIAIE 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
             CR L+   L E  LYVTLEPC MC+ AI  +RI+R+ +GA   +   +   T + +  
Sbjct: 61  EACRTLNSWYLDECTLYVTLEPCVMCSGAIINSRIQRVVFGAFESRWLAL--TTIYQSDI 118

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H P I  G+   +  ++I+D+FK +R
Sbjct: 119 PVNHQPVIVSGVLGDKCSKVIKDYFKNKR 147


>gi|307243435|ref|ZP_07525591.1| putative thiamine-phosphate pyrophosphorylase [Peptostreptococcus
           stomatis DSM 17678]
 gi|306493159|gb|EFM65156.1| putative thiamine-phosphate pyrophosphorylase [Peptostreptococcus
           stomatis DSM 17678]
          Length = 391

 Score =  103 bits (258), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 57/143 (39%), Positives = 81/143 (56%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FMS AL+EA+ A    E P+GAV V + +I+ R  N+     D T HAE++AI+   + L
Sbjct: 244 FMSEALKEARKAYAMKETPIGAVVVYDGQIVGRGFNQVELTGDPTQHAEMVAIQEAAKAL 303

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
            +  L +  +YVT+EPC MCA AI  +RI+ LY GAS+ K   +     F          
Sbjct: 304 GRWRLYDCQMYVTMEPCLMCAGAIENSRIKSLYIGASHKKNHLVGKHNDFKLEVYKDRKI 363

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           +   GI E+ + +I+ DFFKERR
Sbjct: 364 DYEFGILEKEASKILTDFFKERR 386


>gi|291618438|ref|YP_003521180.1| TadA [Pantoea ananatis LMG 20103]
 gi|291153468|gb|ADD78052.1| TadA [Pantoea ananatis LMG 20103]
          Length = 171

 Score =  103 bits (258), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 57/143 (39%), Positives = 79/143 (55%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  AL  AQ A  + E+PVGAV V  +++I    NR     D TAHAEI+A+R G ++L
Sbjct: 16  WMRRALTLAQRAWEQGEVPVGAVLVQGDRVIGEGWNRPIGQHDPTAHAEIMALRQGGKVL 75

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L    LYVTLEPC MCA A+  +RI RL YGA + K G   +          +H  
Sbjct: 76  ENYRLLNTTLYVTLEPCIMCAGAMVHSRIGRLVYGAHDVKTGAAGSLIDILGHPGMNHQV 135

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
            ++ G+ E+    ++ DFF+ RR
Sbjct: 136 ALHQGVLEEECAAMLSDFFRMRR 158


>gi|75908361|ref|YP_322657.1| tRNA-adenosine deaminase [Anabaena variabilis ATCC 29413]
 gi|75702086|gb|ABA21762.1| tRNA-adenosine deaminase [Anabaena variabilis ATCC 29413]
          Length = 147

 Score =  103 bits (258), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 63/143 (44%), Positives = 79/143 (55%), Gaps = 1/143 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           MS ALE A+ A    EIPVGAV    +  +I+   NR    +D TAHAEI+A+R   RIL
Sbjct: 1   MSHALELAKVAGDAGEIPVGAVITDASGNLIAEGENRKERDQDPTAHAEIVALRAATRIL 60

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L E  LYVTLEPC MCA AI  AR+ +L YG  + K G I         A  +H  
Sbjct: 61  QTWRLHECTLYVTLEPCPMCAGAIIQARLGKLVYGVDDTKTGAIRTVLNIPDSAASNHRL 120

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           ++  GI E   RQ +Q++F  RR
Sbjct: 121 QVIGGILESACRQHLQNWFINRR 143


>gi|270291185|ref|ZP_06197408.1| cytidine deaminase [Pediococcus acidilactici 7_4]
 gi|270280581|gb|EFA26416.1| cytidine deaminase [Pediococcus acidilactici 7_4]
          Length = 163

 Score =  103 bits (258), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 54/146 (36%), Positives = 83/146 (56%), Gaps = 3/146 (2%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  AL+EAQ A + +E+P+GAV V + KII R  N     +D T HAE+LAI   C  L
Sbjct: 14  YMGEALKEAQFAKMIDEVPIGAVVVHDGKIIGRGHNLREHSQDATTHAEVLAITEACAYL 73

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  L+VT+EPC MC+  I  ++I  +Y+GA +PK G + +          +H  
Sbjct: 74  RSWRLWDCQLFVTIEPCLMCSGTIINSQIPEVYFGARDPKAGAVRSLYTVLEDQRLNHQV 133

Query: 127 EIYPGISEQRSRQIIQDFFK---ERR 149
           E+  G++  ++  +++ FFK   ERR
Sbjct: 134 EVREGVAADQAAGLMKSFFKAIRERR 159


>gi|323488468|ref|ZP_08093714.1| hypothetical protein GPDM_03987 [Planococcus donghaensis MPA1U2]
 gi|323397860|gb|EGA90660.1| hypothetical protein GPDM_03987 [Planococcus donghaensis MPA1U2]
          Length = 162

 Score =  103 bits (258), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 53/149 (35%), Positives = 82/149 (55%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M+K + +M  A+EEA  AA + E+P+GAV V  +++I+RA N      +   HAE+LAI+
Sbjct: 4   MEKDHFYMQLAIEEANKAAAKGEVPIGAVIVYKDEVIARAHNLRETTNNAVTHAELLAIQ 63

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
             C  L    L +  LYVTLEPC MCA AI  +RI  + YGA + K G +++  +     
Sbjct: 64  EACLHLGNWRLEDTKLYVTLEPCPMCAGAILQSRIPHIVYGARDAKAGCVDSLYRLLNDD 123

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  ++   +      Q++  FF+  R
Sbjct: 124 RFNHQCQVTENVLADECGQLLTQFFRNLR 152


>gi|167755137|ref|ZP_02427264.1| hypothetical protein CLORAM_00641 [Clostridium ramosum DSM 1402]
 gi|167705187|gb|EDS19766.1| hypothetical protein CLORAM_00641 [Clostridium ramosum DSM 1402]
          Length = 177

 Score =  103 bits (258), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 57/143 (39%), Positives = 81/143 (56%), Gaps = 2/143 (1%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  A +EA      +E+PVGAV V + KII+   N     K  TAHAEI+AI   CR L
Sbjct: 32  FMEIAYQEALKCLDMDEVPVGAVIVKDGKIIACGRNLRETSKRATAHAEIIAIEEACRTL 91

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
           +   L E  LYVTLEPC MC+ AI  +RI+R+ +GA   +   +   T + +    +H P
Sbjct: 92  NSWYLDECTLYVTLEPCVMCSGAIINSRIQRVVFGAFESRWLALT--TIYQSDIPVNHQP 149

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
            I  G+   +  ++I+D+FK +R
Sbjct: 150 VIVSGVLGDKCSKVIKDYFKNKR 172


>gi|189426160|ref|YP_001953337.1| CMP/dCMP deaminase zinc-binding [Geobacter lovleyi SZ]
 gi|189422419|gb|ACD96817.1| CMP/dCMP deaminase zinc-binding [Geobacter lovleyi SZ]
          Length = 157

 Score =  103 bits (258), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 58/145 (40%), Positives = 78/145 (53%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           + +M  A+ EA+ A +  E+P+G V V NN+II+RA N     +D  AHAE+LAIR   R
Sbjct: 6   DYWMDKAIAEARKAEVIAEVPIGCVIVQNNRIIARAHNLREAKQDPAAHAELLAIRKAAR 65

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
            L    L E  LYVTLEPC MC  AI LARI  + +G  +PK G   +          +H
Sbjct: 66  KLGNWRLLETTLYVTLEPCLMCMGAILLARIPTVVFGCHDPKAGAAGSLYDLSNDPRLNH 125

Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149
             E+  GI  Q    ++ +FF   R
Sbjct: 126 RFELVSGIRRQECSSMLSEFFAALR 150


>gi|163802511|ref|ZP_02196404.1| molecular chaperone DnaK [Vibrio sp. AND4]
 gi|159173812|gb|EDP58627.1| molecular chaperone DnaK [Vibrio sp. AND4]
          Length = 178

 Score =  103 bits (258), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 57/143 (39%), Positives = 76/143 (53%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  A+E A+ A    E+PVGAV V + KII+   NR+    D TAHAEI  +R     L
Sbjct: 13  FMRRAMELAEQAEAEGEVPVGAVLVKDGKIIAEGWNRSICSHDATAHAEIQTLRKAGETL 72

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  LYVTLEPC MCA A+  +R++R+ YGA + K G        +     +H  
Sbjct: 73  GNYRLLDTTLYVTLEPCPMCAGALLHSRVKRVVYGAPDLKAGAAGTVLNLFESQAAYHYA 132

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
            +  G+ E   R  +Q FFK RR
Sbjct: 133 TVESGLLENECRTQLQAFFKRRR 155


>gi|260913765|ref|ZP_05920241.1| tRNA-specific adenosine deaminase [Pasteurella dagmatis ATCC 43325]
 gi|260632304|gb|EEX50479.1| tRNA-specific adenosine deaminase [Pasteurella dagmatis ATCC 43325]
          Length = 170

 Score =  103 bits (258), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 60/144 (41%), Positives = 81/144 (56%), Gaps = 1/144 (0%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           +M  ALE A  A    EIPVGAV V     ++    N +    D TAHAEI+A+R G + 
Sbjct: 9   WMRYALELADKAEQLGEIPVGAVLVDEEGNVLGEGWNLSIIESDPTAHAEIVALRQGGKT 68

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           L    L    LYVTLEPCTMCA AI  +RI+RL +GAS+ K G + +   F+     +H+
Sbjct: 69  LQNYRLVNTTLYVTLEPCTMCAGAILHSRIKRLVFGASDYKTGAVGSRFHFFDDYKMNHT 128

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
            EI  G+ +    Q +  FF++RR
Sbjct: 129 VEITAGVLQDECSQKLSVFFQKRR 152


>gi|227877638|ref|ZP_03995691.1| nucleoside deaminase [Lactobacillus crispatus JV-V01]
 gi|227862786|gb|EEJ70252.1| nucleoside deaminase [Lactobacillus crispatus JV-V01]
          Length = 185

 Score =  103 bits (258), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 52/144 (36%), Positives = 84/144 (58%), Gaps = 1/144 (0%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNREL-KDVTAHAEILAIRMGCRI 65
           +M  A+++A+ A  + E+P+GAV V  +  +   G   REL +D T HAE++AI+  C  
Sbjct: 29  YMQLAIDQAKEAEKQGEVPIGAVVVDPDGRVVGTGYNRRELDEDATQHAEMIAIKEACSK 88

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           L    L +  L+VTLEPC MCA AI  +RI+ +Y+GA +PK G   +    +++   +H 
Sbjct: 89  LGMWRLIDCSLFVTLEPCPMCAGAIINSRIKDVYFGALDPKAGACGSVVDLFSVEKFNHH 148

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
           P    G+   +  Q+++DFF+  R
Sbjct: 149 PHAIRGLYRDQCAQMLKDFFRAIR 172


>gi|315033440|gb|EFT45372.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Enterococcus faecalis TX0017]
          Length = 173

 Score =  103 bits (258), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 56/145 (38%), Positives = 80/145 (55%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
            +FM  A+ EA+ A    E+P+GAV V   +II R  N     ++ TAHAE+ AI+  CR
Sbjct: 14  ELFMREAIAEAKKAEGLAEVPIGAVIVRQGEIIGRGHNLREARQEATAHAEMYAIQEACR 73

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
            +    L E  L+VTLEPC MC+ A+ LARI  +YYGA++PK G              +H
Sbjct: 74  GIENWRLEETQLFVTLEPCPMCSGAMLLARIPEVYYGATDPKAGTAGTLMNLLEDERFNH 133

Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149
              +  G+ E+  R ++  FFK+ R
Sbjct: 134 VAYVEAGVLEEECRLLLVQFFKKLR 158


>gi|153837700|ref|ZP_01990367.1| tRNA-specific adenosine deaminase [Vibrio parahaemolyticus AQ3810]
 gi|260366298|ref|ZP_05778754.1| tRNA-specific adenosine deaminase [Vibrio parahaemolyticus K5030]
 gi|260876398|ref|ZP_05888753.1| tRNA-specific adenosine deaminase [Vibrio parahaemolyticus AN-5034]
 gi|308095607|ref|ZP_05907165.2| tRNA-specific adenosine deaminase [Vibrio parahaemolyticus
           Peru-466]
 gi|308126068|ref|ZP_05907632.2| tRNA-specific adenosine deaminase [Vibrio parahaemolyticus AQ4037]
 gi|149748895|gb|EDM59726.1| tRNA-specific adenosine deaminase [Vibrio parahaemolyticus AQ3810]
 gi|308086905|gb|EFO36600.1| tRNA-specific adenosine deaminase [Vibrio parahaemolyticus
           Peru-466]
 gi|308092990|gb|EFO42685.1| tRNA-specific adenosine deaminase [Vibrio parahaemolyticus AN-5034]
 gi|308106632|gb|EFO44172.1| tRNA-specific adenosine deaminase [Vibrio parahaemolyticus AQ4037]
 gi|308112714|gb|EFO50254.1| tRNA-specific adenosine deaminase [Vibrio parahaemolyticus K5030]
          Length = 174

 Score =  103 bits (258), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 55/147 (37%), Positives = 80/147 (54%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
           +  +FM  AL  A+ A L  E+PVGAV V + ++I+   NR+    D TAHAEI  +R  
Sbjct: 9   QDEIFMRRALALAEQAELEGEVPVGAVLVKDGEVIAEGWNRSICSHDATAHAEIQTLRNA 68

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
             +L    L +  LYVTLEPC MCA A+  +R++R+ +GA + K G        +     
Sbjct: 69  GAVLENYRLLDTTLYVTLEPCPMCAGALLHSRVKRVVFGAPDLKAGAAGTVLNLFESQAA 128

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H   +  G+ E   R+ +Q FFK RR
Sbjct: 129 YHYATVEKGLLEDECREQLQAFFKRRR 155


>gi|262402782|ref|ZP_06079343.1| tRNA-specific adenosine-34 deaminase [Vibrio sp. RC586]
 gi|262351564|gb|EEZ00697.1| tRNA-specific adenosine-34 deaminase [Vibrio sp. RC586]
          Length = 170

 Score =  103 bits (258), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 57/143 (39%), Positives = 78/143 (54%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  A+E A  A    E+PVGAV V   KII+   N +   +D TAHAEI  IR   ++L
Sbjct: 13  FMRRAIELAAQAEALGEVPVGAVLVQEGKIIAEGWNCSITHQDATAHAEIEVIREAGKVL 72

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
           S   L +  LYVTLEPC MCA A+  +R++R+ YGA + K G        +     +H  
Sbjct: 73  SNYRLLDTTLYVTLEPCPMCAGALLHSRVKRIVYGAPDLKAGAAGTVMDLFNSQASYHYA 132

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
            +  G+ E+  R  +Q FF+ RR
Sbjct: 133 TVEKGLLEEECRTQLQAFFQRRR 155


>gi|58336712|ref|YP_193297.1| cytidine-deoxycytidylate deaminase [Lactobacillus acidophilus NCFM]
 gi|58254029|gb|AAV42266.1| cytidine-deoxycytidylate deaminase [Lactobacillus acidophilus NCFM]
          Length = 168

 Score =  103 bits (258), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 53/145 (36%), Positives = 83/145 (57%), Gaps = 1/145 (0%)

Query: 6   VFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
            +M  A+++A+ A  + E+P+GAV V    KII    NR    +D T HAE++AI+  C+
Sbjct: 9   TYMQLAIDKAKEAEKQGEVPIGAVVVDPTGKIIGTGYNRRELDEDSTQHAEMIAIKEACK 68

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
            L    L +  L+VTLEPC MCA AI  +RI+ +Y+GA +PK G   +    + +   +H
Sbjct: 69  NLGMWRLIDCSLFVTLEPCPMCAGAIINSRIKDVYFGALDPKAGACGSVVDLFAVERFNH 128

Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149
            P    G+   +  Q+++DFF+  R
Sbjct: 129 HPHAIRGLYRDQCAQMLKDFFRAIR 153


>gi|16272843|ref|NP_439066.1| hypothetical protein HI0906 [Haemophilus influenzae Rd KW20]
 gi|260579996|ref|ZP_05847826.1| ComE operon protein 2 [Haemophilus influenzae RdAW]
 gi|1175980|sp|P44931|TADA_HAEIN RecName: Full=tRNA-specific adenosine deaminase
 gi|1573925|gb|AAC22565.1| conserved hypothetical protein [Haemophilus influenzae Rd KW20]
 gi|260093280|gb|EEW77213.1| ComE operon protein 2 [Haemophilus influenzae RdAW]
          Length = 173

 Score =  103 bits (258), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 61/143 (42%), Positives = 82/143 (57%), Gaps = 1/143 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNK-IISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  ALE A  A    EIPVGAV V + + II    N +    D TAHAEI+A+R G + +
Sbjct: 15  MRYALELADKAEALGEIPVGAVLVDDARNIIGEGWNLSIVQSDPTAHAEIIALRNGAKNI 74

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L    LYVTLEPCTMCA AI  +RI+RL +GAS+ K G I +   F+     +H+ 
Sbjct: 75  QNYRLLNSTLYVTLEPCTMCAGAILHSRIKRLVFGASDYKTGAIGSRFHFFDDYKMNHTL 134

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+  G+  +   Q +  FF++RR
Sbjct: 135 EVTSGVLAEECSQKLSTFFQKRR 157


>gi|298368702|ref|ZP_06980020.1| tRNA-specific adenosine deaminase [Neisseria sp. oral taxon 014
           str. F0314]
 gi|298282705|gb|EFI24192.1| tRNA-specific adenosine deaminase [Neisseria sp. oral taxon 014
           str. F0314]
          Length = 241

 Score =  103 bits (258), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 55/145 (37%), Positives = 81/145 (55%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
            +FM  ALE+A  +A   EIPVGA  V N  +I+ A N   + +DV+ HAEI A+     
Sbjct: 93  EIFMRIALEQAVQSAAAGEIPVGAAVVKNGSVIAAAHNTCIQSRDVSRHAEISALAQAGA 152

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
           +L    L   D+YVTLEPC MCA+A+  AR+ R+ +GA  PK G   +    +     + 
Sbjct: 153 VLGNYRLDGCDVYVTLEPCAMCASALIQARVARVIFGADEPKTGAAGSIIDLFAAHGINK 212

Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149
              +  GI ++  R ++Q FF+E+R
Sbjct: 213 HTAVTGGILKKECRTLLQQFFREKR 237


>gi|227903275|ref|ZP_04021080.1| nucleoside deaminase [Lactobacillus acidophilus ATCC 4796]
 gi|227869080|gb|EEJ76501.1| nucleoside deaminase [Lactobacillus acidophilus ATCC 4796]
          Length = 231

 Score =  103 bits (258), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 53/144 (36%), Positives = 83/144 (57%), Gaps = 1/144 (0%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           +M  A+++A+ A  + E+P+GAV V    KII    NR    +D T HAE++AI+  C+ 
Sbjct: 73  YMQLAIDKAKEAEKQGEVPIGAVVVDPTGKIIGTGYNRRELDEDSTQHAEMIAIKEACKN 132

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           L    L +  L+VTLEPC MCA AI  +RI+ +Y+GA +PK G   +    + +   +H 
Sbjct: 133 LGMWRLIDCSLFVTLEPCPMCAGAIINSRIKDVYFGALDPKAGACGSVVDLFAVERFNHH 192

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
           P    G+   +  Q+++DFF+  R
Sbjct: 193 PHAIRGLYRDQCAQMLKDFFRAIR 216


>gi|168214007|ref|ZP_02639632.1| cytidine/deoxycytidylate deaminase family protein [Clostridium
           perfringens CPE str. F4969]
 gi|170714472|gb|EDT26654.1| cytidine/deoxycytidylate deaminase family protein [Clostridium
           perfringens CPE str. F4969]
          Length = 143

 Score =  103 bits (258), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 58/143 (40%), Positives = 84/143 (58%), Gaps = 1/143 (0%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
            +S ALEEA+ A  + E+PVGAV V N +II+RA N    LKD TAHAE+LAIR  C  L
Sbjct: 1   MLSLALEEAEKAREKGEVPVGAVIVKNGEIIARAHNLKETLKDPTAHAEMLAIREACNKL 60

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
           +   L   ++YVTLEPC MCA AI  +R+ ++Y G  +   G   +          ++  
Sbjct: 61  NNWRLHGCEMYVTLEPCPMCAGAILQSRLSKIYIGTFDDTTGAAGSVVNILQNHNLNYFL 120

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+    ++++  +I+  FFK+RR
Sbjct: 121 EVVWE-NDEKCSKILTKFFKDRR 142


>gi|20428822|emb|CAD21697.1| hypothetical protein [Azoarcus evansii]
          Length = 154

 Score =  103 bits (258), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 55/143 (38%), Positives = 81/143 (56%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  ALE+A+ A   +E+PVGAV VL+ +I+ R  N+     D TAHAE++A+R     L
Sbjct: 6   YMRVALEQAREAGSCDEVPVGAVVVLDGEIVGRGFNQPIGRHDPTAHAEVMALRDAAARL 65

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               LP  +LYVTLEPC MC+ AI  +RI R+ +GA +PK G   +    +  +  +H  
Sbjct: 66  GNYRLPGCELYVTLEPCAMCSGAIMHSRIARVVFGARDPKTGVAGSVIDLFAESRLNHHA 125

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
            I  G+  +    ++  FF  RR
Sbjct: 126 TISGGVLAEECGGLLSSFFAARR 148


>gi|295132290|ref|YP_003582966.1| cytidine/deoxycytidylate deaminase family protein [Zunongwangia
           profunda SM-A87]
 gi|294980305|gb|ADF50770.1| cytidine/deoxycytidylate deaminase family protein [Zunongwangia
           profunda SM-A87]
          Length = 149

 Score =  103 bits (257), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 56/143 (39%), Positives = 77/143 (53%), Gaps = 6/143 (4%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  A EEAQ A  + EIPVG V V+ N+II+R  N    L DVTAHAE+ +I      L
Sbjct: 10  FMKKAFEEAQIAFEKGEIPVGVVVVIKNRIIARGHNLTETLNDVTAHAEMQSITAAASFL 69

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
             + L    +YVTLEPC MCA A+  +++ RL + A +   G  + G Q       H   
Sbjct: 70  GGKYLKGCTMYVTLEPCQMCAGALYWSQLSRLVFAAKDDHRGYQKFGVQL------HPKT 123

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+  GI      Q+++ FF ++R
Sbjct: 124 EVSQGIMANECSQLLKKFFIQKR 146


>gi|238896010|ref|YP_002920746.1| tRNA-specific adenosine deaminase [Klebsiella pneumoniae
           NTUH-K2044]
 gi|238548328|dbj|BAH64679.1| tRNA-specific adenosine deaminase [Klebsiella pneumoniae subsp.
           pneumoniae NTUH-K2044]
          Length = 180

 Score =  103 bits (257), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 58/143 (40%), Positives = 78/143 (54%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  AL  A+ A    E+PVGAV V NN++I    NR     D TAHAEI+A+R G  +L
Sbjct: 22  WMRHALTLAKRAWEEGEVPVGAVLVHNNQVIGEGWNRPIGRHDPTAHAEIMALRQGGLVL 81

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  LYVTLEPC MCA A+  +RI RL +GA + K G   +          +H  
Sbjct: 82  QNYRLIDATLYVTLEPCVMCAGAMVHSRIARLVFGARDAKTGAAGSLMDVLHHPGMNHRV 141

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           EI  G+  +    ++ DFF+ RR
Sbjct: 142 EISEGVLAESCSAMLSDFFRWRR 164


>gi|152971415|ref|YP_001336524.1| tRNA-specific adenosine deaminase [Klebsiella pneumoniae subsp.
           pneumoniae MGH 78578]
 gi|150956264|gb|ABR78294.1| tRNA-specific adenosine deaminase [Klebsiella pneumoniae subsp.
           pneumoniae MGH 78578]
          Length = 172

 Score =  103 bits (257), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 58/143 (40%), Positives = 78/143 (54%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  AL  A+ A    E+PVGAV V NN++I    NR     D TAHAEI+A+R G  +L
Sbjct: 14  WMRHALTLAKRAWEEGEVPVGAVLVHNNQVIGEGWNRPIGRHDPTAHAEIMALRQGGLVL 73

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  LYVTLEPC MCA A+  +RI RL +GA + K G   +          +H  
Sbjct: 74  QNYRLIDATLYVTLEPCVMCAGAMVHSRIARLVFGARDAKTGAAGSLMDVLHHPGMNHRV 133

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           EI  G+  +    ++ DFF+ RR
Sbjct: 134 EISEGVLAESCSAMLSDFFRWRR 156


>gi|189220193|ref|YP_001940833.1| Cytosine/adenosine deaminase [Methylacidiphilum infernorum V4]
 gi|189187051|gb|ACD84236.1| Cytosine/adenosine deaminase [Methylacidiphilum infernorum V4]
          Length = 173

 Score =  103 bits (257), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 57/139 (41%), Positives = 76/139 (54%), Gaps = 3/139 (2%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  ALE+A+ A    E+PVGAV V   +I+    NR    +DVTAHAE+ AIR   + +
Sbjct: 20  FMGLALEKAKEAFDNGEVPVGAVIVRGEEILGFGRNRVERHRDVTAHAEMEAIRQSQQRV 79

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L    LYVT EPC MC  A+ L+RI R+ +G S+PK         F+   T    P
Sbjct: 80  GDWRLDSTTLYVTKEPCLMCWGAVFLSRIERVVFGISDPKQADFCCIKDFF---TARKKP 136

Query: 127 EIYPGISEQRSRQIIQDFF 145
           EI PG+  Q S +++  FF
Sbjct: 137 EILPGVRSQESLELMHQFF 155


>gi|242240191|ref|YP_002988372.1| CMP/dCMP deaminase zinc-binding [Dickeya dadantii Ech703]
 gi|242132248|gb|ACS86550.1| CMP/dCMP deaminase zinc-binding [Dickeya dadantii Ech703]
          Length = 164

 Score =  103 bits (257), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 57/143 (39%), Positives = 77/143 (53%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  AL  AQ A    E+PVGAV V   K+I    NR     D TAHAE++A+R G R+L
Sbjct: 10  WMRHALILAQRAWDEGEVPVGAVLVQGGKVIGEGWNRPIGQHDPTAHAEMMALRQGGRVL 69

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  LY+TLEPC MCA A+  +RI RL YGA++ K G   +          +H  
Sbjct: 70  QNYRLLDTTLYITLEPCIMCAGAMVHSRISRLVYGAADAKTGAAGSLVDILRHPGMNHQV 129

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
            I  G+  +    ++ DFF+ RR
Sbjct: 130 AITSGVLAEACSTLLSDFFRMRR 152


>gi|161502277|ref|YP_001569389.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:-- str. RSK2980]
 gi|160863624|gb|ABX20247.1| hypothetical protein SARI_00307 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 176

 Score =  103 bits (257), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 57/143 (39%), Positives = 78/143 (54%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  AL  A+ A    E+PVGAV V N+++I    NR     D TAHAEI+A+R G  +L
Sbjct: 22  WMRHALTLAKRAWDEREVPVGAVLVHNHRVIGEGWNRPIGRHDPTAHAEIMALRQGGLVL 81

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  LYVTLEPC MCA A+  +RIRR+ +GA + K G   +          +H  
Sbjct: 82  QNYRLLDTTLYVTLEPCVMCAGAMVHSRIRRVVFGARDAKTGAAGSLIDVLHHPGMNHRV 141

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           EI  G+       ++ DFF+ RR
Sbjct: 142 EIIEGVLHDECAMLLSDFFRMRR 164


>gi|77460805|ref|YP_350312.1| tRNA-adenosine deaminase [Pseudomonas fluorescens Pf0-1]
 gi|77384808|gb|ABA76321.1| putative deaminase [Pseudomonas fluorescens Pf0-1]
          Length = 165

 Score =  103 bits (257), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 56/143 (39%), Positives = 80/143 (55%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  ALE A   A   E+PVGAV V + +II R  N      D +AHAE++AIR   + +
Sbjct: 18  FMREALELAAQGAALGEVPVGAVLVQDGEIIGRGFNCPISTSDPSAHAEMVAIRAAAQAV 77

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               LP   LYVTLEPC+MCA  I  +R+ R+ +GA  PK G +++  QF+T    +H  
Sbjct: 78  DNYRLPGSTLYVTLEPCSMCAGLIVHSRVSRVVFGALEPKAGIVQSQGQFFTQGFLNHRV 137

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
               G+  +    ++ +FF+ RR
Sbjct: 138 LYEGGVLAEECGAVLTEFFRARR 160


>gi|18309013|ref|NP_560947.1| cytidine/deoxycytidylate deaminase family protein [Clostridium
           perfringens str. 13]
 gi|18143688|dbj|BAB79737.1| conserved hypothetical protein [Clostridium perfringens str. 13]
          Length = 143

 Score =  103 bits (257), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 58/143 (40%), Positives = 84/143 (58%), Gaps = 1/143 (0%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
            +S ALEEA+ A  + E+PVGAV V + +II+RA N    LKD TAHAEILAIR  C  L
Sbjct: 1   MLSLALEEAEKAREKGEVPVGAVIVKDGEIIARAHNLKETLKDPTAHAEILAIREACNKL 60

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
           +   L   ++YVTLEPC MCA AI  +R+ ++Y G  +   G   +          ++  
Sbjct: 61  NNWRLHGCEMYVTLEPCPMCAGAILQSRLSKIYIGTFDDTTGAAGSVVNILQNHNLNYFL 120

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+    ++++  +I+  FFK+RR
Sbjct: 121 EVVWQ-NDEKCSKILTKFFKDRR 142


>gi|289551636|ref|YP_003472540.1| tRNA-specific adenosine-34 deaminase [Staphylococcus lugdunensis
           HKU09-01]
 gi|289181167|gb|ADC88412.1| tRNA-specific adenosine-34 deaminase [Staphylococcus lugdunensis
           HKU09-01]
          Length = 158

 Score =  103 bits (257), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 56/149 (37%), Positives = 81/149 (54%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M+    +M  A+ EA+ A    E+P+GAV V + ++I+RA N     +  TAHAE +AI 
Sbjct: 1   MRNDEYYMKIAIAEARKAEAIGEVPIGAVIVKDTQVIARAHNLRETSQQPTAHAEHIAIE 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
               +L    L    LYVTLEPC MCA AI ++RI R+ YGA +PKGG   +        
Sbjct: 61  RASEVLGSWRLEACTLYVTLEPCVMCAGAIVMSRIPRVVYGAIDPKGGCSGSLMNLLEQP 120

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H   +  G+ EQ   Q+++ FF+  R
Sbjct: 121 QLNHQAIVKTGVLEQECGQLLRSFFQRLR 149


>gi|225847988|ref|YP_002728151.1| tRNA-specific adenosine deaminase [Sulfurihydrogenibium azorense
           Az-Fu1]
 gi|225643800|gb|ACN98850.1| tRNA-specific adenosine deaminase [Sulfurihydrogenibium azorense
           Az-Fu1]
          Length = 157

 Score =  103 bits (257), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 55/147 (37%), Positives = 86/147 (58%), Gaps = 2/147 (1%)

Query: 1   MKKGNV-FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
           MK+ N  F+  A++EA+ A  + E+PVGAV V ++K++S+  N     K+   HAEI+AI
Sbjct: 1   MKEINTKFIELAIKEAEKALKKGEVPVGAVLVKDDKVVSKGYNLRISKKNALYHAEIVAI 60

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
              C+ L    L +  LY TLEPC MCA AI  ARI+++ + A + KGG + +    +  
Sbjct: 61  ERACKKLKSWRLDDTVLYTTLEPCLMCAGAIMQARIKKVVFLAKDEKGGAVLSNYTVFDD 120

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFK 146
                  E Y  I ++R+ ++++DFFK
Sbjct: 121 KKLPFKVE-YSYIPDERAEKLLKDFFK 146


>gi|218129188|ref|ZP_03457992.1| hypothetical protein BACEGG_00763 [Bacteroides eggerthii DSM 20697]
 gi|217988566|gb|EEC54886.1| hypothetical protein BACEGG_00763 [Bacteroides eggerthii DSM 20697]
          Length = 138

 Score =  103 bits (257), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 58/142 (40%), Positives = 77/142 (54%), Gaps = 5/142 (3%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  AL EAQ A  R E+PVGAV V  +++I+RA N    L DVTAHAE+ AI      L 
Sbjct: 1   MKQALLEAQKAGDRGEVPVGAVVVCKDRVIARAHNLTETLTDVTAHAEMQAITAAASTLG 60

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
            + L E  LYVT+EPC MCA AI+ A+  RL +GA + K      G Q Y     H    
Sbjct: 61  GKYLNECTLYVTVEPCVMCAGAIAWAQTGRLVFGAEDEK-----RGYQRYAPHALHPKTV 115

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
           +  G+       ++++FF  +R
Sbjct: 116 VVKGVLGDECAALMKNFFAGKR 137


>gi|306834459|ref|ZP_07467572.1| tRNA-specific adenosine deaminase [Streptococcus bovis ATCC 700338]
 gi|304423261|gb|EFM26414.1| tRNA-specific adenosine deaminase [Streptococcus bovis ATCC 700338]
          Length = 168

 Score =  103 bits (257), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 59/143 (41%), Positives = 78/143 (54%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  AL+EAQ +  + EIP+G V V N  II R  N   E +    HAEI+AI       
Sbjct: 12  FMREALKEAQKSLAKEEIPIGCVIVKNGDIIGRGHNAREERQKAILHAEIMAIDDANENE 71

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  L+VT+EPC MC+ AI LARI ++ YGA+N K GG  +     T    +H  
Sbjct: 72  GNWRLLDSTLFVTIEPCVMCSGAIGLARIPQVIYGAANQKFGGAGSLYDILTDVRLNHRV 131

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+  GI E     I+QDFF++ R
Sbjct: 132 EVETGILETECAAIMQDFFRKNR 154


>gi|229542244|ref|ZP_04431304.1| CMP/dCMP deaminase zinc-binding [Bacillus coagulans 36D1]
 gi|229326664|gb|EEN92339.1| CMP/dCMP deaminase zinc-binding [Bacillus coagulans 36D1]
          Length = 169

 Score =  103 bits (257), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 52/143 (36%), Positives = 79/143 (55%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  A++EA  A    E+P+GAV VL+ K+I+ A N     +   AHAE+LAI   C + 
Sbjct: 8   YMRLAIQEAVKAQRLREVPIGAVIVLDEKVIAAAHNLRETTQRAAAHAELLAIEKACEVT 67

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L   +LYVTLEPC MC+ A+  +RI+R+ YGA +PK G   +          +H  
Sbjct: 68  GSWRLENAELYVTLEPCPMCSGAVLQSRIKRVVYGAKDPKAGCAGSLMNLLEDGRFNHRS 127

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+  G+ E    ++++ FF+  R
Sbjct: 128 EVVSGVLETECGELLRSFFRSLR 150


>gi|168210507|ref|ZP_02636132.1| cytidine/deoxycytidylate deaminase family protein [Clostridium
           perfringens B str. ATCC 3626]
 gi|170711409|gb|EDT23591.1| cytidine/deoxycytidylate deaminase family protein [Clostridium
           perfringens B str. ATCC 3626]
          Length = 143

 Score =  103 bits (257), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 58/143 (40%), Positives = 84/143 (58%), Gaps = 1/143 (0%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
            +S ALEEA+ A  + E+PVGAV V + +II+RA N    LKD TAHAEILAIR  C  L
Sbjct: 1   MLSLALEEAEKAREKGEVPVGAVIVKDGEIIARAHNLKETLKDPTAHAEILAIREACNKL 60

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
           +   L   ++YVTLEPC MCA AI  +R+ ++Y G  +   G   +          ++  
Sbjct: 61  NNWRLNGCEMYVTLEPCPMCAGAILQSRLSKIYIGTFDDTTGAAGSVVNILQNHNLNYFL 120

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+    ++++  +I+  FFK+RR
Sbjct: 121 EVVWE-NDEKCSKILTKFFKDRR 142


>gi|293394841|ref|ZP_06639131.1| tRNA-specific adenosine deaminase [Serratia odorifera DSM 4582]
 gi|291422592|gb|EFE95831.1| tRNA-specific adenosine deaminase [Serratia odorifera DSM 4582]
          Length = 179

 Score =  103 bits (257), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 58/145 (40%), Positives = 79/145 (54%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           + +M  AL  A  A    E+PVGA+ VL+N++I    NR     D TAHAEI+A+R G  
Sbjct: 18  DYWMRQALTLALRAQEEGEVPVGALLVLDNQVIGEGWNRPIGRHDPTAHAEIMALRQGGA 77

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
           +L    L    LYVTLEPC MCA A+  +RIRRL YGAS+ K G   +          +H
Sbjct: 78  VLQNYRLLNATLYVTLEPCVMCAGAMVHSRIRRLVYGASDEKTGAAGSLVDILRHPGMNH 137

Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149
             +I  G+  +     + +FF+ RR
Sbjct: 138 QVDITAGVLAEECAATLSNFFRLRR 162


>gi|157371891|ref|YP_001479880.1| CMP/dCMP deaminase zinc-binding [Serratia proteamaculans 568]
 gi|157323655|gb|ABV42752.1| CMP/dCMP deaminase zinc-binding [Serratia proteamaculans 568]
          Length = 170

 Score =  103 bits (257), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 58/143 (40%), Positives = 78/143 (54%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  AL  A  A    E+PVGA+ VL+N++I    NR     D TAHAEI+A+R G  +L
Sbjct: 9   WMRQALRLALRAQEEGEVPVGALLVLDNQVIGEGWNRPIGRHDPTAHAEIMALRQGGAVL 68

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L    LYVTLEPC MCA A+  +RIRRL YGA++ K G   +          +H  
Sbjct: 69  QNYRLLNATLYVTLEPCVMCAGAMVHSRIRRLVYGAADVKTGAAGSLVDILRHPGMNHQV 128

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           EI  G+  +     + +FF+ RR
Sbjct: 129 EILSGVLAEECAATLSNFFRMRR 151


>gi|110798954|ref|YP_694504.1| cytidine/deoxycytidylate deaminase family protein [Clostridium
           perfringens ATCC 13124]
 gi|169343373|ref|ZP_02864377.1| cytidine/deoxycytidylate deaminase family protein [Clostridium
           perfringens C str. JGS1495]
 gi|182625368|ref|ZP_02953141.1| tRNA-specific adenosine deaminase [Clostridium perfringens D str.
           JGS1721]
 gi|110673601|gb|ABG82588.1| cytidine/deoxycytidylate deaminase family protein [Clostridium
           perfringens ATCC 13124]
 gi|169298459|gb|EDS80545.1| cytidine/deoxycytidylate deaminase family protein [Clostridium
           perfringens C str. JGS1495]
 gi|177909365|gb|EDT71817.1| tRNA-specific adenosine deaminase [Clostridium perfringens D str.
           JGS1721]
          Length = 143

 Score =  103 bits (257), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 58/143 (40%), Positives = 84/143 (58%), Gaps = 1/143 (0%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
            +S ALEEA+ A  + E+PVGAV V + +II+RA N    LKD TAHAEILAIR  C  L
Sbjct: 1   MLSLALEEAEKAREKGEVPVGAVIVKDGEIIARAHNLKETLKDPTAHAEILAIREACNKL 60

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
           +   L   ++YVTLEPC MCA AI  +R+ ++Y G  +   G   +          ++  
Sbjct: 61  NNWRLHGCEMYVTLEPCPMCAGAILQSRLSKIYIGTFDDTTGAAGSVVNILQNHNLNYFL 120

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+    ++++  +I+  FFK+RR
Sbjct: 121 EVVWE-NDEKCSKILTKFFKDRR 142


>gi|89073121|ref|ZP_01159660.1| Putative cytosine/adenosine deaminase [Photobacterium sp. SKA34]
 gi|89051074|gb|EAR56531.1| Putative cytosine/adenosine deaminase [Photobacterium sp. SKA34]
          Length = 175

 Score =  103 bits (257), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 55/143 (38%), Positives = 77/143 (53%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  A+E A  A    E+PVGAV V N +++    NR+    D TAHAEI+A+R   ++L
Sbjct: 13  FMRRAIELAAKAEEEGEVPVGAVVVYNGRVVGEGWNRSIGQHDATAHAEIMALRQAGKVL 72

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  LYVTLEPC MCA A+   R+ ++ YGA + K G   +     +    +H  
Sbjct: 73  ENYRLIDTTLYVTLEPCPMCAGAMVHCRVGKVVYGADDLKTGAAGSTMNLLSYDGVNHHV 132

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E   G+  +  R  +Q FFK RR
Sbjct: 133 EQTSGVLVEECRAQLQAFFKRRR 155


>gi|255304952|ref|ZP_05349126.1| putative cytosine/adenosine deaminase [Clostridium difficile ATCC
           43255]
          Length = 151

 Score =  103 bits (257), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 56/147 (38%), Positives = 86/147 (58%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
           + + +M  AL+EA  A  + E P+GA+ V +N+II+RA N    LKD TAHAEILAI+  
Sbjct: 2   ESSFYMKEALKEAYKAYNKKETPIGAIIVKDNQIIARAHNLTETLKDSTAHAEILAIKQA 61

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
              L    L + DLYVT+EPC MC+ AI  +RI++L  G  + K   IE   +F      
Sbjct: 62  SEKLGGWRLTDCDLYVTMEPCIMCSGAIVNSRIKKLIIGTRHVKNSYIEKQHEFKLDYFN 121

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +++ ++   + ++    ++Q+FFK  R
Sbjct: 122 NNNVKVAFDVLQEECSIMLQEFFKALR 148


>gi|157150388|ref|YP_001449474.1| putative cytidine/deoxycytidylate deaminase [Streptococcus gordonii
           str. Challis substr. CH1]
 gi|157075182|gb|ABV09865.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus
           gordonii str. Challis substr. CH1]
          Length = 177

 Score =  103 bits (256), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 58/143 (40%), Positives = 81/143 (56%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  AL+EA+ A   +EIP+G V V + +II R  N   EL+    HAEI+AI       
Sbjct: 33  FMLEALKEARIALENDEIPIGCVIVRDGQIIGRGHNAREELQRAVMHAEIMAIEEANHHE 92

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
           +   L +  L+VT+EPC MC+ AI LARI  + YGA+N K G   +     T    +H  
Sbjct: 93  NGWRLLDTTLFVTIEPCVMCSGAIGLARIPHVVYGAANQKFGAAGSLYDILTDERLNHRV 152

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+  G+ ++   QI+QDFF+ RR
Sbjct: 153 EVETGVLQEECAQIMQDFFRNRR 175


>gi|148985360|ref|ZP_01818565.1| adenylosuccinate synthetase [Streptococcus pneumoniae SP3-BS71]
 gi|148986205|ref|ZP_01819157.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus
           pneumoniae SP3-BS71]
 gi|148995215|ref|ZP_01824050.1| deoxyuridine 5'-triphosphate nucleotidohydrolase [Streptococcus
           pneumoniae SP9-BS68]
 gi|149004172|ref|ZP_01828969.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus
           pneumoniae SP14-BS69]
 gi|149023458|ref|ZP_01836047.1| adenylosuccinate synthetase [Streptococcus pneumoniae SP23-BS72]
 gi|168483689|ref|ZP_02708641.1| tRNA-specific adenosine deaminase [Streptococcus pneumoniae
           CDC1873-00]
 gi|168486729|ref|ZP_02711237.1| tRNA-specific adenosine deaminase [Streptococcus pneumoniae
           CDC1087-00]
 gi|169833520|ref|YP_001693493.1| tRNA-specific adenosine deaminase [Streptococcus pneumoniae
           Hungary19A-6]
 gi|221230966|ref|YP_002510118.1| deaminase [Streptococcus pneumoniae ATCC 700669]
 gi|225853633|ref|YP_002735145.1| tRNA-specific adenosine deaminase [Streptococcus pneumoniae JJA]
 gi|225857883|ref|YP_002739393.1| tRNA-specific adenosine deaminase [Streptococcus pneumoniae 70585]
 gi|237650015|ref|ZP_04524267.1| tRNA-specific adenosine deaminase [Streptococcus pneumoniae CCRI
           1974]
 gi|237822610|ref|ZP_04598455.1| tRNA-specific adenosine deaminase [Streptococcus pneumoniae CCRI
           1974M2]
 gi|147757834|gb|EDK64845.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus
           pneumoniae SP14-BS69]
 gi|147921819|gb|EDK72947.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus
           pneumoniae SP3-BS71]
 gi|147922318|gb|EDK73438.1| adenylosuccinate synthetase [Streptococcus pneumoniae SP3-BS71]
 gi|147926817|gb|EDK77872.1| deoxyuridine 5'-triphosphate nucleotidohydrolase [Streptococcus
           pneumoniae SP9-BS68]
 gi|147929781|gb|EDK80771.1| adenylosuccinate synthetase [Streptococcus pneumoniae SP23-BS72]
 gi|168996022|gb|ACA36634.1| tRNA-specific adenosine deaminase [Streptococcus pneumoniae
           Hungary19A-6]
 gi|172043028|gb|EDT51074.1| tRNA-specific adenosine deaminase [Streptococcus pneumoniae
           CDC1873-00]
 gi|183570307|gb|EDT90835.1| tRNA-specific adenosine deaminase [Streptococcus pneumoniae
           CDC1087-00]
 gi|220673426|emb|CAR67886.1| putative deaminase [Streptococcus pneumoniae ATCC 700669]
 gi|225721389|gb|ACO17243.1| tRNA-specific adenosine deaminase [Streptococcus pneumoniae 70585]
 gi|225723035|gb|ACO18888.1| tRNA-specific adenosine deaminase [Streptococcus pneumoniae JJA]
 gi|301793341|emb|CBW35702.1| putative deaminase [Streptococcus pneumoniae INV104]
 gi|301799211|emb|CBW31724.1| putative deaminase [Streptococcus pneumoniae OXC141]
 gi|332075677|gb|EGI86144.1| cytidine and deoxycytidylate deaminase zinc-binding region family
           protein [Streptococcus pneumoniae GA17570]
 gi|332204048|gb|EGJ18113.1| cytidine and deoxycytidylate deaminase zinc-binding region family
           protein [Streptococcus pneumoniae GA47901]
 gi|332205041|gb|EGJ19104.1| cytidine and deoxycytidylate deaminase zinc-binding region family
           protein [Streptococcus pneumoniae GA47368]
          Length = 155

 Score =  103 bits (256), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 63/151 (41%), Positives = 84/151 (55%), Gaps = 4/151 (2%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +++  VFM  AL EA+ A   +EIP+G V V + +II R  N   EL+    HAEI+AI 
Sbjct: 5   LEEKEVFMREALREAEIALEHDEIPIGCVIVKDGEIIGRGHNAREELQRAVMHAEIMAIE 64

Query: 61  MGCRILSQEILPEVD--LYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
                LS+E    +D  L+VT+EPC MC+ AI LARI  + YGA N K G   +     T
Sbjct: 65  DAN--LSEESWRLLDCTLFVTIEPCVMCSGAIGLARIPNVVYGAKNQKFGAAGSLYDILT 122

Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
               +H  E+  GI E     I+QDFF+ RR
Sbjct: 123 DERLNHRVEVEIGILEDECAAIMQDFFRNRR 153


>gi|299143513|ref|ZP_07036593.1| cytidine/deoxycytidylate deaminase family protein [Peptoniphilus
           sp. oral taxon 386 str. F0131]
 gi|298517998|gb|EFI41737.1| cytidine/deoxycytidylate deaminase family protein [Peptoniphilus
           sp. oral taxon 386 str. F0131]
          Length = 153

 Score =  103 bits (256), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 56/150 (37%), Positives = 89/150 (59%), Gaps = 3/150 (2%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M + + FM+ AL+ A+ +    +IP+GA+ V N++II R  N+   LKD +AHAE++A++
Sbjct: 1   MNRNDFFMNEALKLAKISYDNGDIPIGAIIVFNDEIIGRGFNKKELLKDASAHAELIAMK 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL- 119
              + L+   L +  +YVTLEPC MCA AI   R++++Y GA N + G    G++   L 
Sbjct: 61  EASKFLNSYHLEDCTMYVTLEPCAMCAGAILNFRLKKIYIGAKNERFGCC--GSKINLLN 118

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
              +H+ E   GI E   + +I +FF E R
Sbjct: 119 YNFNHTCECEFGILEDDCKNLISNFFIELR 148


>gi|332830410|gb|EGK03038.1| hypothetical protein HMPREF9455_01288 [Dysgonomonas gadei ATCC
           BAA-286]
          Length = 147

 Score =  103 bits (256), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 55/143 (38%), Positives = 81/143 (56%), Gaps = 5/143 (3%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  AL EAQ A  + E+P+GAV V  N+II+RA N    L DVTAHAE+ AI      L
Sbjct: 10  YMRQALNEAQIAFEKKEVPIGAVIVCQNRIIARAHNLTETLNDVTAHAEMQAITAAANFL 69

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
             + L    LYVTLEPC MCA  +  ++I ++ +GA + K      G   ++    H+  
Sbjct: 70  GGKYLTNCTLYVTLEPCPMCAGGLLWSQIPKVVFGAKDEK-----KGYSLFSPNILHNKT 124

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
            I  GI E+    ++++FF+++R
Sbjct: 125 SIISGILEEECAFLLKEFFRQKR 147


>gi|307704429|ref|ZP_07641340.1| tRNA-specific adenosine deaminase [Streptococcus mitis SK597]
 gi|307707916|ref|ZP_07644391.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus
           mitis NCTC 12261]
 gi|307615981|gb|EFN95179.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus
           mitis NCTC 12261]
 gi|307622002|gb|EFO01028.1| tRNA-specific adenosine deaminase [Streptococcus mitis SK597]
          Length = 155

 Score =  103 bits (256), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 63/151 (41%), Positives = 84/151 (55%), Gaps = 4/151 (2%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +++  VFM  AL EA+ A   +EIP+G V V + +II R  N   EL+    HAEI+AI 
Sbjct: 5   VEEKEVFMREALREAEIALEHDEIPIGCVIVKDGEIIGRGHNAREELQRAVMHAEIMAIE 64

Query: 61  MGCRILSQEILPEVD--LYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
                LS+E    +D  L+VT+EPC MC+ AI LARI  + YGA N K G   +     T
Sbjct: 65  NAN--LSEESWRLLDCTLFVTIEPCVMCSGAIGLARIPNVVYGAKNQKFGAAGSLYDILT 122

Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
               +H  E+  GI E     I+QDFF+ RR
Sbjct: 123 DERLNHRVEVETGILEDECAAIMQDFFRNRR 153


>gi|257082102|ref|ZP_05576463.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis E1Sol]
 gi|257419759|ref|ZP_05596753.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis T11]
 gi|257422022|ref|ZP_05599012.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis X98]
 gi|256990132|gb|EEU77434.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis E1Sol]
 gi|257161587|gb|EEU91547.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis T11]
 gi|257163846|gb|EEU93806.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis X98]
 gi|315157050|gb|EFU01067.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Enterococcus faecalis TX0043]
          Length = 173

 Score =  103 bits (256), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 56/143 (39%), Positives = 79/143 (55%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  A+ EA+ A    E+P+GAV V   +II R  N     ++ TAHAE+ AI+  CR +
Sbjct: 16  FMREAIAEAKKAEGLAEVPIGAVIVRKGEIIGRGHNLREARQEATAHAEMYAIQEACRGI 75

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L E  L+VTLEPC MC+ A+ LARI  +YYGA++PK G              +H  
Sbjct: 76  ENWRLEETQLFVTLEPCPMCSGAMLLARIPEVYYGATDPKAGTAGTLMNLLEDERFNHVA 135

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
            +  G+ E+  R ++  FFK+ R
Sbjct: 136 YVEAGVLEEECRLLLVQFFKKLR 158


>gi|229917437|ref|YP_002886083.1| CMP/dCMP deaminase zinc-binding [Exiguobacterium sp. AT1b]
 gi|229468866|gb|ACQ70638.1| CMP/dCMP deaminase zinc-binding [Exiguobacterium sp. AT1b]
          Length = 166

 Score =  103 bits (256), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 53/149 (35%), Positives = 81/149 (54%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M++   FM  A+EEA+ A    E+P+G V V  +++I+   NR    +   AHAE++AI 
Sbjct: 1   MERDERFMQLAIEEAKKAEAIGEVPIGCVIVKGDQVIATGHNRRETDRLAAAHAEMIAIE 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
                L    L + +LYVTLEPC MCA AI L+R++R+ +GA +PKGG            
Sbjct: 61  TANETLGNWRLEDCELYVTLEPCPMCAGAIVLSRVKRVIFGAHDPKGGCCGTLMNLVQDE 120

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  E+   +  +   Q++ DFF+  R
Sbjct: 121 RFNHQAEVTENVLAEECGQLLTDFFRALR 149


>gi|37520622|ref|NP_923999.1| putative cytidine and deoxycytidylate deaminase [Gloeobacter
           violaceus PCC 7421]
 gi|35211616|dbj|BAC88994.1| gll1053 [Gloeobacter violaceus PCC 7421]
          Length = 150

 Score =  103 bits (256), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 59/150 (39%), Positives = 82/150 (54%), Gaps = 1/150 (0%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELK-DVTAHAEILAI 59
           MK  + +M  ALE A+ A    E+PVGA+ V  + ++   G   RE   D TAHAEI+A+
Sbjct: 1   MKSHSEWMGMALELAREAGRVGEVPVGALVVDASGVLLATGANRRERDYDPTAHAEIVAM 60

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
           R  C  L    L +  LYVTLEPC MCA AI  +R+  L YGA +PK G + +       
Sbjct: 61  RAACAKLRDWRLTDCTLYVTLEPCAMCAGAILQSRLGLLVYGADDPKAGAVGSVLNLPAS 120

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
           A   H   +  GI E+  R ++  +F+E+R
Sbjct: 121 AVSFHRLPVVAGIEERACRDLLCRWFEEQR 150


>gi|319901083|ref|YP_004160811.1| CMP/dCMP deaminase zinc-binding protein [Bacteroides helcogenes P
           36-108]
 gi|319416114|gb|ADV43225.1| CMP/dCMP deaminase zinc-binding protein [Bacteroides helcogenes P
           36-108]
          Length = 159

 Score =  103 bits (256), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 58/143 (40%), Positives = 79/143 (55%), Gaps = 5/143 (3%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  AL EA+ A  R E+PVGAV V  ++II+RA N    L DVTAHAE+ AI      L
Sbjct: 21  YMKQALLEARKAGERGEVPVGAVVVCKDRIIARAHNLTETLTDVTAHAEMQAITAAASTL 80

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
             + L E  LYVT+EPC MCA AI+ A++ +L +GA + K      G Q Y     H   
Sbjct: 81  GGKYLNECTLYVTVEPCVMCAGAIAWAQMGKLVFGAVDEK-----RGYQRYASQALHPKT 135

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
            +  GI       ++++FF  +R
Sbjct: 136 IVVQGILADECAALMKEFFAGKR 158


>gi|90579814|ref|ZP_01235622.1| Putative cytosine/adenosine deaminase [Vibrio angustum S14]
 gi|90438699|gb|EAS63882.1| Putative cytosine/adenosine deaminase [Vibrio angustum S14]
          Length = 175

 Score =  103 bits (256), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 55/143 (38%), Positives = 77/143 (53%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  A+E A  A    E+PVGAV V N +++    NR+    D TAHAEI+A+R   ++L
Sbjct: 13  FMRRAIELAAKAEEEGEVPVGAVVVYNGQVVGEGWNRSIGQHDATAHAEIMALRQAGKVL 72

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  LYVTLEPC MCA A+   R+ ++ YGA + K G   +     +    +H  
Sbjct: 73  ENYRLIDTTLYVTLEPCPMCAGAMVHCRVGKVVYGADDLKTGAAGSTMNLLSYDGVNHHV 132

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E   G+  +  R  +Q FFK RR
Sbjct: 133 EQTSGVLVEECRAQLQAFFKRRR 155


>gi|317496201|ref|ZP_07954561.1| cytidine and deoxycytidylate deaminase zinc-binding protein
           [Gemella moribillum M424]
 gi|316913776|gb|EFV35262.1| cytidine and deoxycytidylate deaminase zinc-binding protein
           [Gemella moribillum M424]
          Length = 153

 Score =  103 bits (256), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 53/149 (35%), Positives = 83/149 (55%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           MK  N +M  ALEEA+ A  + E+PVGAV V++++++++A N     + V  HAE+L I+
Sbjct: 1   MKDHNYYMEMALEEARRAYQKGEVPVGAVLVIDDEVVAKAHNTREASQQVLNHAEMLVIK 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
             C  +    L    LY T+EPC MC+ AI  AR+  + YGA++ K G   +        
Sbjct: 61  EACEKIGFWRLDNSYLYTTVEPCVMCSGAIVQARVENVIYGAADVKYGCCGSCIDLVANN 120

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H   I  G+ E+    +++DFF+E R
Sbjct: 121 KFNHQAHIISGVLEEECAALMKDFFRELR 149


>gi|33597610|ref|NP_885253.1| putative zinc-binding hydrolase [Bordetella parapertussis 12822]
 gi|33602013|ref|NP_889573.1| putative zinc-binding hydrolase [Bordetella bronchiseptica RB50]
 gi|33574038|emb|CAE38361.1| putative zinc-binding hydrolase [Bordetella parapertussis]
 gi|33576451|emb|CAE33529.1| putative zinc-binding hydrolase [Bordetella bronchiseptica RB50]
          Length = 168

 Score =  103 bits (256), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 58/144 (40%), Positives = 81/144 (56%), Gaps = 1/144 (0%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
            M+ ALE+AQ AA   E+PVGAV V    +++    NR    +D TAHAEI+A+R   R 
Sbjct: 19  LMALALEQAQEAARLGEVPVGAVVVDAQGEVLGAGYNRTIIDRDPTAHAEIVALRAAARR 78

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           L    LP V LYVTLEPC MC  A+  AR+ R+ YGA +PK G   +      +   +H 
Sbjct: 79  LDNYRLPGVSLYVTLEPCVMCIGAMLHARLARVVYGARDPKTGACGSVLDVGAVGQLNHH 138

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
             I  G+  +   ++++ FF+ RR
Sbjct: 139 TTITGGVLAEPCGELLRGFFRARR 162


>gi|88813490|ref|ZP_01128725.1| zinc-binding domain protein [Nitrococcus mobilis Nb-231]
 gi|88789280|gb|EAR20412.1| zinc-binding domain protein [Nitrococcus mobilis Nb-231]
          Length = 181

 Score =  103 bits (256), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 55/148 (37%), Positives = 80/148 (54%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
            +   FM+ ALE A+ A    E+PVGAV V   +++    NR    +D TAHAEI A+R 
Sbjct: 24  DQDQAFMARALELARRAQAHGEVPVGAVVVQRERVVGEGYNRPIATRDPTAHAEIEALRA 83

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
             + L    LP   LYVTLEPC MC  A+  AR+ RL +GA +PK G      +     +
Sbjct: 84  AGQALGAYRLPATTLYVTLEPCAMCVGALIHARVARLVFGAHDPKTGACGGALRLIDYPS 143

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H   +  G+  +   +I++ FF++RR
Sbjct: 144 HNHRIALCGGVLAETCSEILRAFFRDRR 171


>gi|315659096|ref|ZP_07911961.1| zinc-binding domain protein [Staphylococcus lugdunensis M23590]
 gi|315495820|gb|EFU84150.1| zinc-binding domain protein [Staphylococcus lugdunensis M23590]
          Length = 158

 Score =  103 bits (256), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 56/149 (37%), Positives = 81/149 (54%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M+    +M  A+ EA+ A    E+P+GAV V + ++I+RA N     +  TAHAE +AI 
Sbjct: 1   MRNDEYYMKIAIAEARKAEAIGEVPIGAVIVKDTQVIARAHNLRETSQQPTAHAEHIAIE 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
               +L    L    LYVTLEPC MCA AI ++RI R+ YGA +PKGG   +        
Sbjct: 61  RASEVLGSWRLEACTLYVTLEPCVMCAGAIVMSRIPRVVYGAIDPKGGCSGSLMNLLEQP 120

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H   +  G+ EQ   Q+++ FF+  R
Sbjct: 121 QFNHQAIVKTGVLEQECGQLLRSFFQRLR 149


>gi|300860777|ref|ZP_07106864.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Enterococcus faecalis TUSoD Ef11]
 gi|300849816|gb|EFK77566.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Enterococcus faecalis TUSoD Ef11]
 gi|315146059|gb|EFT90075.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Enterococcus faecalis TX2141]
          Length = 173

 Score =  103 bits (256), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 56/143 (39%), Positives = 79/143 (55%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  A+ EA+ A    E+P+GAV V   +II R  N     ++ TAHAE+ AI+  CR +
Sbjct: 16  FMREAIAEAKKAEGLAEVPIGAVIVRQGEIIGRGHNLREARQEATAHAEMYAIQEACRGI 75

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L E  L+VTLEPC MC+ A+ LARI  +YYGA++PK G              +H  
Sbjct: 76  ENWRLEETQLFVTLEPCPMCSGAMLLARIPEVYYGATDPKAGTAGTLMNLLEDERFNHVA 135

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
            +  G+ E+  R ++  FFK+ R
Sbjct: 136 YVEAGVLEEECRLLLVQFFKKLR 158


>gi|91215472|ref|ZP_01252443.1| putative cytosine/adenosine deaminase [Psychroflexus torquis ATCC
           700755]
 gi|91186424|gb|EAS72796.1| putative cytosine/adenosine deaminase [Psychroflexus torquis ATCC
           700755]
          Length = 149

 Score =  103 bits (256), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 57/145 (39%), Positives = 83/145 (57%), Gaps = 6/145 (4%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           + FM  AL+EAQ A  + EIPVGAV   NN+II+++ N   +L DVTAHAE+ AI     
Sbjct: 8   HYFMKKALQEAQQAFDKGEIPVGAVVTHNNQIIAKSHNLTEQLTDVTAHAEMQAITAAAN 67

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
            +  + L    LYVTLEPC MCA A+  +++ RL + A +   G    GTQ +      H
Sbjct: 68  HIGGKYLRGCTLYVTLEPCQMCAGALYWSQLSRLVFAAPDEGRGYRTLGTQLHPKTKVDH 127

Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149
                 GI E+ + ++++ FF ++R
Sbjct: 128 ------GILEEEASRLLKAFFIQKR 146


>gi|29376713|ref|NP_815867.1| cytidine/deoxycytidylate deaminase family protein [Enterococcus
           faecalis V583]
 gi|227520261|ref|ZP_03950310.1| nucleoside deaminase [Enterococcus faecalis TX0104]
 gi|227555305|ref|ZP_03985352.1| nucleoside deaminase [Enterococcus faecalis HH22]
 gi|229549515|ref|ZP_04438240.1| nucleoside deaminase [Enterococcus faecalis ATCC 29200]
 gi|256617220|ref|ZP_05474066.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis ATCC
           4200]
 gi|256763008|ref|ZP_05503588.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis T3]
 gi|256853656|ref|ZP_05559021.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis T8]
 gi|256956593|ref|ZP_05560764.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis DS5]
 gi|256963481|ref|ZP_05567652.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis HIP11704]
 gi|257079519|ref|ZP_05573880.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis JH1]
 gi|257084716|ref|ZP_05579077.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis Fly1]
 gi|257087338|ref|ZP_05581699.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis D6]
 gi|257090472|ref|ZP_05584833.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis CH188]
 gi|294779058|ref|ZP_06744471.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Enterococcus faecalis PC1.1]
 gi|307270381|ref|ZP_07551686.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Enterococcus faecalis TX4248]
 gi|307272388|ref|ZP_07553644.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Enterococcus faecalis TX0855]
 gi|307277264|ref|ZP_07558368.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Enterococcus faecalis TX2134]
 gi|307287809|ref|ZP_07567847.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Enterococcus faecalis TX0109]
 gi|307290876|ref|ZP_07570767.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Enterococcus faecalis TX0411]
 gi|312901462|ref|ZP_07760737.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Enterococcus faecalis TX0470]
 gi|312903780|ref|ZP_07762953.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Enterococcus faecalis TX0635]
 gi|312953348|ref|ZP_07772190.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Enterococcus faecalis TX0102]
 gi|29344177|gb|AAO81937.1| cytidine/deoxycytidylate deaminase family protein [Enterococcus
           faecalis V583]
 gi|227072340|gb|EEI10303.1| nucleoside deaminase [Enterococcus faecalis TX0104]
 gi|227175516|gb|EEI56488.1| nucleoside deaminase [Enterococcus faecalis HH22]
 gi|229305333|gb|EEN71329.1| nucleoside deaminase [Enterococcus faecalis ATCC 29200]
 gi|256596747|gb|EEU15923.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis ATCC
           4200]
 gi|256684259|gb|EEU23954.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis T3]
 gi|256710599|gb|EEU25642.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis T8]
 gi|256947089|gb|EEU63721.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis DS5]
 gi|256953977|gb|EEU70609.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis HIP11704]
 gi|256987549|gb|EEU74851.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis JH1]
 gi|256992746|gb|EEU80048.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis Fly1]
 gi|256995368|gb|EEU82670.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis D6]
 gi|256999284|gb|EEU85804.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis CH188]
 gi|294453888|gb|EFG22277.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Enterococcus faecalis PC1.1]
 gi|306498076|gb|EFM67602.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Enterococcus faecalis TX0411]
 gi|306501197|gb|EFM70502.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Enterococcus faecalis TX0109]
 gi|306506194|gb|EFM75360.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Enterococcus faecalis TX2134]
 gi|306510942|gb|EFM79956.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Enterococcus faecalis TX0855]
 gi|306513289|gb|EFM81916.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Enterococcus faecalis TX4248]
 gi|310628736|gb|EFQ12019.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Enterococcus faecalis TX0102]
 gi|310632854|gb|EFQ16137.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Enterococcus faecalis TX0635]
 gi|311291451|gb|EFQ70007.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Enterococcus faecalis TX0470]
 gi|315025888|gb|EFT37820.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Enterococcus faecalis TX2137]
 gi|315028203|gb|EFT40135.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Enterococcus faecalis TX4000]
 gi|315035707|gb|EFT47639.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Enterococcus faecalis TX0027]
 gi|315149190|gb|EFT93206.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Enterococcus faecalis TX0012]
 gi|315154468|gb|EFT98484.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Enterococcus faecalis TX0031]
 gi|315157427|gb|EFU01444.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Enterococcus faecalis TX0312]
 gi|315161835|gb|EFU05852.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Enterococcus faecalis TX0645]
 gi|315164307|gb|EFU08324.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Enterococcus faecalis TX1302]
 gi|315166488|gb|EFU10505.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Enterococcus faecalis TX1341]
 gi|315171494|gb|EFU15511.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Enterococcus faecalis TX1342]
 gi|315575193|gb|EFU87384.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Enterococcus faecalis TX0309B]
 gi|315578180|gb|EFU90371.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Enterococcus faecalis TX0630]
 gi|315582620|gb|EFU94811.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Enterococcus faecalis TX0309A]
 gi|323481270|gb|ADX80709.1| cytidine and deoxycytidylate deaminase family protein [Enterococcus
           faecalis 62]
 gi|327535599|gb|AEA94433.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis OG1RF]
          Length = 173

 Score =  103 bits (256), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 56/143 (39%), Positives = 79/143 (55%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  A+ EA+ A    E+P+GAV V   +II R  N     ++ TAHAE+ AI+  CR +
Sbjct: 16  FMREAIAEAKKAEGLAEVPIGAVIVRQGEIIGRGHNLREARQEATAHAEMYAIQEACRGI 75

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L E  L+VTLEPC MC+ A+ LARI  +YYGA++PK G              +H  
Sbjct: 76  ENWRLEETQLFVTLEPCPMCSGAMLLARIPEVYYGATDPKAGTAGTLMNLLEDERFNHVA 135

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
            +  G+ E+  R ++  FFK+ R
Sbjct: 136 YVEAGVLEEECRLLLVQFFKKLR 158


>gi|121998459|ref|YP_001003246.1| CMP/dCMP deaminase, zinc-binding [Halorhodospira halophila SL1]
 gi|121589864|gb|ABM62444.1| CMP/dCMP deaminase, zinc-binding protein [Halorhodospira halophila
           SL1]
          Length = 142

 Score =  103 bits (256), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 58/142 (40%), Positives = 82/142 (57%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M+ ALE A+ AA + E+PVGAV V +  ++    N+    +D TAHAEI A+R   +   
Sbjct: 1   MARALELARYAADQGEVPVGAVVVRDGVLLGEGRNQPIVSRDPTAHAEINALRAAGQAAG 60

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
              LP   LYVTLEPC MCA A+  ARI RL YGA++PK G          L   +H  E
Sbjct: 61  AYRLPGATLYVTLEPCFMCAGALIHARIERLVYGAADPKTGACGGQFDLLGLPGHNHRVE 120

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
           +  G+S + +  ++++FF+ RR
Sbjct: 121 VTAGVSGEAAAGLLREFFRARR 142


>gi|199599026|ref|ZP_03212433.1| Cytosine/adenosine deaminase [Lactobacillus rhamnosus HN001]
 gi|199590062|gb|EDY98161.1| Cytosine/adenosine deaminase [Lactobacillus rhamnosus HN001]
          Length = 170

 Score =  103 bits (256), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 66/148 (44%), Positives = 86/148 (58%), Gaps = 6/148 (4%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           N +MS AL EA+ AA   E+P+GAV V + +II R  N     +D T HAEILAI+  CR
Sbjct: 9   NQYMSAALAEAKKAAAIGEVPIGAVVVHDQQIIGRGYNLRETTQDATQHAEILAIQAACR 68

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL---AT 121
            L    L +  L+VTLEPC MCA A+  ARI   Y+GA++PK G    GT FY L     
Sbjct: 69  QLGTWRLEDCSLFVTLEPCPMCAGAMINARIATCYFGATDPKAG--VAGT-FYNLLEDTR 125

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H   + PGI    S  ++Q+FF+  R
Sbjct: 126 FNHQVAVVPGIQATASAALLQEFFRAIR 153


>gi|15836532|ref|NP_301056.1| cytosine deaminase [Chlamydophila pneumoniae J138]
 gi|33242370|ref|NP_877311.1| putative cytosine deaminase [Chlamydophila pneumoniae TW-183]
 gi|8979374|dbj|BAA99208.1| cytosine deaminase [Chlamydophila pneumoniae J138]
 gi|33236881|gb|AAP98968.1| putative cytosine deaminase [Chlamydophila pneumoniae TW-183]
          Length = 148

 Score =  103 bits (256), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 56/142 (39%), Positives = 81/142 (57%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  A +EA+ A  ++E+PVG V V ++KII+RA N   +LKD TAHAEIL I    + L 
Sbjct: 1   MQQAFKEARKAYDQDEVPVGCVIVKDDKIIARAHNSVEKLKDATAHAEILCIGSAAQDLD 60

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
              L +  LY TLEPC MCA AI LARI R+ + A + + G   +    +T     H+  
Sbjct: 61  NWRLLDTVLYCTLEPCLMCAGAIQLARIPRIVWAAPDVRLGAGGSWVNIFTEEHPFHTVS 120

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
              G+  + +  +++ FF E+R
Sbjct: 121 CTGGVCSEEAEHLMKKFFVEKR 142


>gi|241889023|ref|ZP_04776327.1| tRNA-specific adenosine deaminase [Gemella haemolysans ATCC 10379]
 gi|241864272|gb|EER68650.1| tRNA-specific adenosine deaminase [Gemella haemolysans ATCC 10379]
          Length = 165

 Score =  103 bits (256), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 55/149 (36%), Positives = 83/149 (55%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +K  + +M  ALEEA+ A  + E+P+GAV V+ +K++++A N   E +    HAEIL I+
Sbjct: 12  VKDHSYYMEMALEEARRAYAKGEVPIGAVLVIGDKVVAKAHNTREENQQALNHAEILVIK 71

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
             C       L    LY T+EPC MC+ AI  ARI  + YGAS+PK G   +        
Sbjct: 72  ESCEKQGFWRLDNSYLYTTVEPCVMCSGAIVQARIENVIYGASDPKYGCCGSCIDLVGEN 131

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  +I  G+ E+    ++++FFKE R
Sbjct: 132 KFNHQAKIISGVLEEECSILMKNFFKELR 160


>gi|225860063|ref|YP_002741572.1| tRNA-specific adenosine deaminase [Streptococcus pneumoniae
           Taiwan19F-14]
 gi|298229197|ref|ZP_06962878.1| tRNA-specific adenosine deaminase [Streptococcus pneumoniae str.
           Canada MDR_19F]
 gi|298254029|ref|ZP_06977615.1| tRNA-specific adenosine deaminase [Streptococcus pneumoniae str.
           Canada MDR_19A]
 gi|298501811|ref|YP_003723751.1| cytosine deaminase [Streptococcus pneumoniae TCH8431/19A]
 gi|225728250|gb|ACO24101.1| tRNA-specific adenosine deaminase [Streptococcus pneumoniae
           Taiwan19F-14]
 gi|298237406|gb|ADI68537.1| possible cytosine deaminase [Streptococcus pneumoniae TCH8431/19A]
 gi|327390436|gb|EGE88776.1| cytidine and deoxycytidylate deaminase zinc-binding region family
           protein [Streptococcus pneumoniae GA04375]
          Length = 155

 Score =  103 bits (256), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 63/151 (41%), Positives = 84/151 (55%), Gaps = 4/151 (2%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +++  VFM  AL EA+ A   +EIP+G V V + +II R  N   EL+    HAEI+AI 
Sbjct: 5   LEEKEVFMREALREAEIALEHDEIPIGCVIVKDGEIIGRGHNAREELQRAVMHAEIMAIE 64

Query: 61  MGCRILSQEILPEVD--LYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
                LS+E    +D  L+VT+EPC MC+ AI LARI  + YGA N K G   +     T
Sbjct: 65  DAN--LSKESWRLLDCTLFVTIEPCVMCSGAIGLARIPNVVYGAKNQKFGAAGSLYDILT 122

Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
               +H  E+  GI E     I+QDFF+ RR
Sbjct: 123 DERLNHRVEVEIGILEDECAAIMQDFFRNRR 153


>gi|328472552|gb|EGF43415.1| tRNA-specific adenosine deaminase [Vibrio parahaemolyticus 10329]
          Length = 199

 Score =  103 bits (256), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 55/147 (37%), Positives = 80/147 (54%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
           +  +FM  AL  A+ A L  E+PVGAV V + ++I+   NR+    D TAHAEI  +R  
Sbjct: 34  QDEIFMRRALALAEQAELEGEVPVGAVLVKDGEVIAEGWNRSICSHDATAHAEIQTLRNA 93

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
             +L    L +  LYVTLEPC MCA A+  +R++R+ +GA + K G        +     
Sbjct: 94  GAVLENYRLLDTTLYVTLEPCPMCAGALLHSRVKRVVFGAPDLKAGAAGTVLNLFESQAA 153

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H   +  G+ E   R+ +Q FFK RR
Sbjct: 154 YHYATVERGLLEDECREQLQAFFKRRR 180


>gi|298373649|ref|ZP_06983638.1| tRNA-specific adenosine deaminase [Bacteroidetes oral taxon 274
           str. F0058]
 gi|298274701|gb|EFI16253.1| tRNA-specific adenosine deaminase [Bacteroidetes oral taxon 274
           str. F0058]
          Length = 143

 Score =  103 bits (256), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 57/143 (39%), Positives = 76/143 (53%), Gaps = 5/143 (3%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  AL EA  A    E+P+GAV V    II++A N    L DVTAHAE+ A+ M    L
Sbjct: 6   FMQQALREAAYAFDEGEVPIGAVVVCAGNIIAKAHNLTERLNDVTAHAEMQAVTMAANYL 65

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
             + L +  LYVTLEPC MCA A++ A I R+ +GA + K      G   +     H   
Sbjct: 66  GGKYLNDCTLYVTLEPCVMCAGALAWAHIGRVVFGAYDDK-----RGFGRFAPKALHTKT 120

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+  G+  Q   +I+Q FF  +R
Sbjct: 121 ELVGGVMAQECGEILQRFFSTKR 143


>gi|260102436|ref|ZP_05752673.1| tRNA-specific adenosine deaminase [Lactobacillus helveticus DSM
           20075]
 gi|260083756|gb|EEW67876.1| tRNA-specific adenosine deaminase [Lactobacillus helveticus DSM
           20075]
          Length = 168

 Score =  103 bits (256), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 52/144 (36%), Positives = 82/144 (56%), Gaps = 1/144 (0%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           +M  A+++A+ A  + E+P+GAV V    K+I    NR    +D T HAE++AI+  C  
Sbjct: 10  YMELAIDQAKEAEKQGEVPIGAVVVDPEGKVIGTGYNRRELDEDSTQHAEMIAIKEACHN 69

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           L    L +  L+VTLEPC MCA AI  +RI+ +Y+GA +PK G   +    + +   +H 
Sbjct: 70  LGMWRLIDCSLFVTLEPCPMCAGAIINSRIKDVYFGALDPKAGACGSVVDLFEVEKFNHH 129

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
           P    G+   +  Q+++DFF+  R
Sbjct: 130 PHSISGLYRDQCAQMLKDFFRAIR 153


>gi|320353809|ref|YP_004195148.1| tRNA-adenosine deaminase [Desulfobulbus propionicus DSM 2032]
 gi|320122311|gb|ADW17857.1| tRNA-adenosine deaminase [Desulfobulbus propionicus DSM 2032]
          Length = 146

 Score =  103 bits (256), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 55/144 (38%), Positives = 84/144 (58%), Gaps = 1/144 (0%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
            M  AL +A+ AA   E+PVGAVA+     I++ AGN      D + HAE++ +R   ++
Sbjct: 3   LMRRALVQARQAAEAGEVPVGAVAIDAQGAILAEAGNNCIGASDPSGHAEMVVLRRAAQV 62

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           +    LP + LYVTLEPC MCAA +  ARI RL +GA++PKGG I +  +  +    +H 
Sbjct: 63  VGNYRLPGLTLYVTLEPCPMCAALMVHARIARLVFGATDPKGGAIVSKYRIGSDGLLNHG 122

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
             +  G+  +    +++DFF+ RR
Sbjct: 123 FSVTGGVCAEECGNLLRDFFRGRR 146


>gi|172056061|ref|YP_001812521.1| CMP/dCMP deaminase zinc-binding [Exiguobacterium sibiricum 255-15]
 gi|171988582|gb|ACB59504.1| CMP/dCMP deaminase zinc-binding [Exiguobacterium sibiricum 255-15]
          Length = 169

 Score =  103 bits (256), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 55/149 (36%), Positives = 81/149 (54%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M++   +M  A+EEA+ A    E+P+G V V  +++I+   N        TAHAE+LAI 
Sbjct: 2   MERHEHYMRLAIEEAKKAKAIGEVPIGCVIVKGDEVIATGYNHRETNHQATAHAELLAIE 61

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
             C  L+   L   +LYVTLEPC MCA AI L+RI  + +GA +PKGG            
Sbjct: 62  EACNKLANWRLEGCELYVTLEPCPMCAGAIMLSRIEHVIFGAVDPKGGCCGTLMNLVQDE 121

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  ++  G+ EQ   +++  FF+E R
Sbjct: 122 RFNHVSQLTGGVLEQECGEMLTSFFRELR 150


>gi|322388496|ref|ZP_08062098.1| tRNA-specific adenosine deaminase [Streptococcus infantis ATCC
           700779]
 gi|321140614|gb|EFX36117.1| tRNA-specific adenosine deaminase [Streptococcus infantis ATCC
           700779]
          Length = 166

 Score =  103 bits (256), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 60/151 (39%), Positives = 85/151 (56%), Gaps = 4/151 (2%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +++   FM  AL+EA+ A   +EIP+G V V + K+I R  N   EL+    HAEI+AI 
Sbjct: 16  LEEKEAFMREALKEAEIALEHDEIPIGCVIVKDGKVIGRGHNAREELQRAVMHAEIMAIE 75

Query: 61  MGCRILSQEILPEVD--LYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
                LS+E    +D  L+VT+EPC MC+ AI LARI  + YGA N K G   +     T
Sbjct: 76  NAN--LSEESWRLLDCTLFVTIEPCVMCSGAIGLARIPNVIYGAKNQKFGAAGSLYDILT 133

Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
               +H  ++  G+ E    +I+QDFF+ RR
Sbjct: 134 DERLNHRVDVETGVLENECAEIMQDFFRNRR 164


>gi|329117262|ref|ZP_08245979.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Streptococcus parauberis NCFD 2020]
 gi|326907667|gb|EGE54581.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Streptococcus parauberis NCFD 2020]
          Length = 169

 Score =  103 bits (256), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 56/143 (39%), Positives = 79/143 (55%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  AL EA+ +  + EIP+G V V + +II R  N   EL     HAE++AI       
Sbjct: 11  FMREALREAEKSLAKEEIPIGCVIVKDGQIIGRGHNAREELNQAIMHAEMMAISQANAHE 70

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L E  ++VT+EPC MC+ AI LARI ++ YGA+N K GG ++  Q  T    +H  
Sbjct: 71  GNWRLLETTMFVTIEPCVMCSGAIGLARIPKVIYGAANQKFGGAQSLYQILTDERLNHRV 130

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+  G+ E     I+Q FF++ R
Sbjct: 131 ELETGVLEADCAAIMQSFFRQNR 153


>gi|33592773|ref|NP_880417.1| putative zinc-binding hydrolase [Bordetella pertussis Tohama I]
 gi|33572421|emb|CAE41987.1| putative zinc-binding hydrolase [Bordetella pertussis Tohama I]
 gi|332382186|gb|AEE67033.1| putative zinc-binding hydrolase [Bordetella pertussis CS]
          Length = 149

 Score =  103 bits (256), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 58/143 (40%), Positives = 81/143 (56%), Gaps = 1/143 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M+ ALE+AQ AA   E+PVGAV V    +++    NR    +D TAHAEI+A+R   R L
Sbjct: 1   MALALEQAQEAARLGEVPVGAVVVDAQGEVLGTGYNRTIIDRDPTAHAEIVALRAAARRL 60

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               LP V LYVTLEPC MC  A+  AR+ R+ YGA +PK G   +      +   +H  
Sbjct: 61  DNYRLPGVSLYVTLEPCVMCIGAMLHARLARVVYGARDPKTGACGSVLDVGAVGQLNHHT 120

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
            I  G+  +   ++++ FF+ RR
Sbjct: 121 TITGGVLAEPCGELLRGFFRARR 143


>gi|171777570|ref|ZP_02919258.1| hypothetical protein STRINF_00093 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
 gi|171283179|gb|EDT48603.1| hypothetical protein STRINF_00093 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
          Length = 168

 Score =  103 bits (256), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 58/143 (40%), Positives = 78/143 (54%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  AL+EAQ +  + EIP+G V V N  II R  N   E +    HAEI+AI       
Sbjct: 12  FMREALKEAQKSLAKEEIPIGCVIVKNGDIIGRGHNAREERQKAILHAEIMAIDDANENE 71

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  L+VT+EPC MC+ AI LAR+ ++ YGA+N K GG  +     T    +H  
Sbjct: 72  GSWRLLDSTLFVTIEPCVMCSGAIGLARVPQVIYGAANQKFGGAGSLYDILTDVRLNHRV 131

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+  GI E     I+QDFF++ R
Sbjct: 132 EVETGILETECAAIMQDFFRKNR 154


>gi|15899968|ref|NP_344572.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus
           pneumoniae TIGR4]
 gi|111657255|ref|ZP_01408023.1| hypothetical protein SpneT_02001535 [Streptococcus pneumoniae
           TIGR4]
 gi|148996424|ref|ZP_01824142.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus
           pneumoniae SP11-BS70]
 gi|149010880|ref|ZP_01832185.1| adenylosuccinate synthetase [Streptococcus pneumoniae SP19-BS75]
 gi|168492307|ref|ZP_02716450.1| tRNA-specific adenosine deaminase [Streptococcus pneumoniae
           CDC0288-04]
 gi|168576944|ref|ZP_02722786.1| tRNA-specific adenosine deaminase [Streptococcus pneumoniae
           MLV-016]
 gi|225855809|ref|YP_002737320.1| tRNA-specific adenosine deaminase [Streptococcus pneumoniae P1031]
 gi|307066702|ref|YP_003875668.1| cytosine/adenosine deaminase [Streptococcus pneumoniae AP200]
 gi|14971484|gb|AAK74212.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus
           pneumoniae TIGR4]
 gi|147756999|gb|EDK64038.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus
           pneumoniae SP11-BS70]
 gi|147764516|gb|EDK71446.1| adenylosuccinate synthetase [Streptococcus pneumoniae SP19-BS75]
 gi|183573448|gb|EDT93976.1| tRNA-specific adenosine deaminase [Streptococcus pneumoniae
           CDC0288-04]
 gi|183577431|gb|EDT97959.1| tRNA-specific adenosine deaminase [Streptococcus pneumoniae
           MLV-016]
 gi|225725405|gb|ACO21257.1| tRNA-specific adenosine deaminase [Streptococcus pneumoniae P1031]
 gi|306408239|gb|ADM83666.1| Cytosine/adenosine deaminase [Streptococcus pneumoniae AP200]
 gi|332077311|gb|EGI87772.1| cytidine and deoxycytidylate deaminase zinc-binding region family
           protein [Streptococcus pneumoniae GA41301]
 gi|332201950|gb|EGJ16019.1| cytidine and deoxycytidylate deaminase zinc-binding region family
           protein [Streptococcus pneumoniae GA41317]
          Length = 155

 Score =  103 bits (256), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 63/151 (41%), Positives = 84/151 (55%), Gaps = 4/151 (2%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +++  VFM  AL EA+ A   +EIP+G V V + +II R  N   EL+    HAEI+AI 
Sbjct: 5   LEEKEVFMREALREAEIALEHDEIPIGCVIVKDGEIIGRGHNAREELQRAVMHAEIMAIE 64

Query: 61  MGCRILSQEILPEVD--LYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
                LS+E    +D  L+VT+EPC MC+ AI LARI  + YGA N K G   +     T
Sbjct: 65  DAN--LSEESWRLLDCTLFVTIEPCVMCSGAIGLARIPNVVYGAKNQKFGAAGSLYNILT 122

Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
               +H  E+  GI E     I+QDFF+ RR
Sbjct: 123 DERLNHRVEVEIGILEDECAAIMQDFFRNRR 153


>gi|146329465|ref|YP_001209489.1| adenosine deaminase [Dichelobacter nodosus VCS1703A]
 gi|146232935|gb|ABQ13913.1| adenosine deaminase [Dichelobacter nodosus VCS1703A]
          Length = 157

 Score =  102 bits (255), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 58/144 (40%), Positives = 82/144 (56%), Gaps = 1/144 (0%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  ALE+AQ AA   EIP+GAV V   ++I+   NR     D +AH+EIL +R G + +
Sbjct: 6   FMRLALEQAQLAAEIGEIPIGAVLVYQQQVIAANFNRTISACDPSAHSEILVLREGAQRI 65

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC-HHS 125
               L E+ LYVT+EPC MC  A+  ARI +L +GA N +GG   +       A   HH 
Sbjct: 66  KNYRLTEMALYVTVEPCVMCVGALIHARIEKLVFGAYNARGGACGSSFDLTRHAQLNHHI 125

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
            E+  G+     + ++Q FF++RR
Sbjct: 126 NEVKGGVLAAECQLLLQQFFQKRR 149


>gi|257094052|ref|YP_003167693.1| CMP/dCMP deaminase zinc-binding [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
 gi|257046576|gb|ACV35764.1| CMP/dCMP deaminase zinc-binding [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
          Length = 153

 Score =  102 bits (255), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 57/143 (39%), Positives = 77/143 (53%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  AL  AQ A    E+PVGA+ V +  I+ R  N      D TAHAEI A+R   R L
Sbjct: 6   FMREALSLAQAAECLGEVPVGALVVRDGVIVGRGFNSPIGEHDPTAHAEIAALRDAARTL 65

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               LP  +L+VTLEPC MCA A+  AR+ RL YGA +PK G   +    + +   +H  
Sbjct: 66  RNYRLPGCELFVTLEPCAMCAGAMLQARLARLVYGARDPKTGVHGSVVDLFAVGRLNHHT 125

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           ++  G+      +++ DFF  RR
Sbjct: 126 QVVGGVLAAECGRLLSDFFAARR 148


>gi|297627118|ref|YP_003688881.1| CMP/dCMP deaminase, zinc-binding [Propionibacterium freudenreichii
           subsp. shermanii CIRM-BIA1]
 gi|296922883|emb|CBL57463.1| CMP/dCMP deaminase, zinc-binding [Propionibacterium freudenreichii
           subsp. shermanii CIRM-BIA1]
          Length = 159

 Score =  102 bits (255), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 54/128 (42%), Positives = 72/128 (56%), Gaps = 1/128 (0%)

Query: 23  EIPVGAVAVLNNKII-SRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81
           ++PVGAV +  N ++    GNR  +  D TAHAE+LAIR  C       L +  L VTLE
Sbjct: 32  DVPVGAVVLDGNGVLLGEGGNRREQDGDATAHAEVLAIRAACARRGAWRLDDCTLVVTLE 91

Query: 82  PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141
           PCTMCA A+  ARIRRL +GA +PK G I +          +H  E+  GI     ++++
Sbjct: 92  PCTMCAGALVNARIRRLVFGAFDPKAGAIASLWDVVRDPRLNHRVEVVGGIMADDCQRVL 151

Query: 142 QDFFKERR 149
            DFF  RR
Sbjct: 152 TDFFATRR 159


>gi|315125849|ref|YP_004067852.1| tRNA-specific adenosine deaminase [Pseudoalteromonas sp. SM9913]
 gi|315014363|gb|ADT67701.1| tRNA-specific adenosine deaminase [Pseudoalteromonas sp. SM9913]
          Length = 168

 Score =  102 bits (255), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 56/143 (39%), Positives = 84/143 (58%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  AL  A+ A   +EIPVGA+ V +N++IS   NR+    D +AHAE++A+R   ++L
Sbjct: 10  WMEQALVYAKQAEQLDEIPVGAIIVKDNQLISAGYNRSITDNDPSAHAEMIAVREAGKVL 69

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
           +   L +  LYVTLEPC+MCA  +  +RI+RL +GA++ K G   +          +H  
Sbjct: 70  NNYRLIDCTLYVTLEPCSMCAGLLVHSRIKRLVFGAADAKTGSAGSIMNLLQEPRLNHQV 129

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           EI  G+ E +  + I  FFK RR
Sbjct: 130 EITGGVLETQCAETISSFFKRRR 152


>gi|94266763|ref|ZP_01290431.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [delta
           proteobacterium MLMS-1]
 gi|94270234|ref|ZP_01291686.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [delta
           proteobacterium MLMS-1]
 gi|93450891|gb|EAT01904.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [delta
           proteobacterium MLMS-1]
 gi|93452585|gb|EAT03162.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [delta
           proteobacterium MLMS-1]
          Length = 156

 Score =  102 bits (255), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 53/129 (41%), Positives = 77/129 (59%), Gaps = 1/129 (0%)

Query: 22  NEIPVGAVAVLNNKIISRA-GNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80
            E+PVGA+ V  +  +  A GNR  E  D  AHAEI+ +R    +L+   LP   LYVTL
Sbjct: 25  GEVPVGALLVAADATVLVADGNRTIEYCDPAAHAEIVVLRRAAALLANHRLPGATLYVTL 84

Query: 81  EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140
           EPC MCA A+  ARI RL YGA++PK G I++  Q    +  +H  E+  G+  +    +
Sbjct: 85  EPCVMCAGALIQARIERLVYGAADPKAGAIDSLFQLAADSRLNHRFEVDSGVLAEECGLL 144

Query: 141 IQDFFKERR 149
           ++DFF+++R
Sbjct: 145 LRDFFRQKR 153


>gi|332534515|ref|ZP_08410352.1| tRNA-specific adenosine-34 deaminase [Pseudoalteromonas
           haloplanktis ANT/505]
 gi|332036083|gb|EGI72560.1| tRNA-specific adenosine-34 deaminase [Pseudoalteromonas
           haloplanktis ANT/505]
          Length = 171

 Score =  102 bits (255), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 56/143 (39%), Positives = 84/143 (58%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  AL  A+ A L +EIPVGA+ V +N++IS   NR+    D +AHAE++A+R   ++L
Sbjct: 10  WMEQALLYAKQAELLDEIPVGAIVVKDNQLISVGYNRSITDNDPSAHAEMIAVREAGKVL 69

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
           +   L +  LYVTLEPC+MCA  +  +RI+RL +GA + K G   +          +H  
Sbjct: 70  NNYRLIDCTLYVTLEPCSMCAGLLVHSRIKRLVFGALDAKTGSAGSIMNLLQEPRLNHQV 129

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+  G+  Q+    I +FFK RR
Sbjct: 130 EVCGGVLAQQCGDTISNFFKRRR 152


>gi|220930799|ref|YP_002507708.1| CMP/dCMP deaminase zinc-binding [Clostridium cellulolyticum H10]
 gi|220001127|gb|ACL77728.1| CMP/dCMP deaminase zinc-binding [Clostridium cellulolyticum H10]
          Length = 152

 Score =  102 bits (255), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 56/147 (38%), Positives = 82/147 (55%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
           K   FM  A+++A+ A    E PVGAV V N +II+   NR  E  DVT+HAEI A++  
Sbjct: 4   KNEQFMLAAIQQAKEAYKNGESPVGAVIVKNGEIIAYGCNRREEKLDVTSHAEIEALKKA 63

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
            + +    L   D+YVTLEPC MCA AI  +RI+ LY GA + K G   +    + +   
Sbjct: 64  AKEIGTWKLDGCDMYVTLEPCPMCAGAIIQSRIKTLYIGAMDKKSGSAGSVVDLFRVPQF 123

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H  ++  G+  +    I+ +FFK+ R
Sbjct: 124 NHRVDVVYGLMFEECGTILTEFFKQLR 150


>gi|160947058|ref|ZP_02094225.1| hypothetical protein PEPMIC_00989 [Parvimonas micra ATCC 33270]
 gi|158446192|gb|EDP23187.1| hypothetical protein PEPMIC_00989 [Parvimonas micra ATCC 33270]
          Length = 155

 Score =  102 bits (255), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 62/152 (40%), Positives = 85/152 (55%), Gaps = 6/152 (3%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M +   FM  AL+EA+ A  + E+P+G V V ++KI+SR  N+    K    HAEI+AI 
Sbjct: 1   MSRDEYFMDIALKEAKKAYNKGEVPIGCVIVKDDKIVSRGHNQVLSKKSGVNHAEIIAIN 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPK---GGGIENGTQFY 117
              + L    L + +L+VTLEPC MCA AI  +RI+R+  GA + K    G IEN     
Sbjct: 61  KAGQKLGDFRLEDTELFVTLEPCCMCAGAIVNSRIKRVIIGAMDVKRGFCGSIENVLDRQ 120

Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
            L   +H   I  G+ EQ+   I+QDFFK  R
Sbjct: 121 EL---NHRSIIKTGVLEQKCLDILQDFFKNLR 149


>gi|332973009|gb|EGK10948.1| cytidine/deoxycytidylate deaminase [Psychrobacter sp. 1501(2011)]
          Length = 207

 Score =  102 bits (255), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 58/143 (40%), Positives = 77/143 (53%), Gaps = 1/143 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  ALE AQ  A + E+PVGAV V    II    N+     D TAHAEI+A+R  C  L 
Sbjct: 57  MQAALELAQQGASKEEVPVGAVLVQEGNIIGEGFNQPILTCDPTAHAEIVALRSACSALE 116

Query: 68  QEILP-EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
              LP    LYVTLEPCTMC  A+  AR+ RL +    P+ G + +      +   +H  
Sbjct: 117 NYRLPANTTLYVTLEPCTMCLGALIHARLSRLVFATQEPRAGMVGSQLNLVEMDFYNHKI 176

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
            +  G+ +  S+QI++ FFK RR
Sbjct: 177 AVNYGLLQADSQQILKSFFKARR 199


>gi|332289514|ref|YP_004420366.1| tRNA-specific adenosine deaminase [Gallibacterium anatis UMN179]
 gi|330432410|gb|AEC17469.1| tRNA-specific adenosine deaminase [Gallibacterium anatis UMN179]
          Length = 153

 Score =  102 bits (255), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 61/143 (42%), Positives = 81/143 (56%), Gaps = 1/143 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  AL  A NAA+  EIPVGAV V     I++   N++  L D TAHAEI+A+R   + L
Sbjct: 1   MQYALALADNAAMMGEIPVGAVLVDEQGNIVAEGWNQSITLSDPTAHAEIMALRQAGQKL 60

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L  + LYVTLEPC MCA AI  +RI+RL +GAS+ K G I +    +     +H  
Sbjct: 61  QNYRLLNLTLYVTLEPCPMCAGAILHSRIKRLVFGASDYKTGAIGSRFHLFEDYRMNHIV 120

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           EI  G+  +     I  FF++RR
Sbjct: 121 EITAGVLAEECSAKISQFFQKRR 143


>gi|124008183|ref|ZP_01692880.1| cytosine deaminase [Microscilla marina ATCC 23134]
 gi|123986282|gb|EAY26104.1| cytosine deaminase [Microscilla marina ATCC 23134]
          Length = 154

 Score =  102 bits (255), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 59/148 (39%), Positives = 83/148 (56%), Gaps = 5/148 (3%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  A +EA  A  + EIPVGAV V+ +KII+RA N+  +L DVTAHAEILA+      L
Sbjct: 6   YMQQAYKEAVIAYNKGEIPVGAVVVVQDKIIARAHNQTEQLLDVTAHAEILAVTGAANYL 65

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGG-----GIENGTQFYTLAT 121
             + L +  +YVTLEPC MCA AI+ +++ RL +GA + K G         GT       
Sbjct: 66  GAKYLNQCTMYVTLEPCVMCAGAIAWSQLGRLVFGAYDVKRGFSRIESATEGTNNKVTKL 125

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            H       G+ E    +++Q FF++ R
Sbjct: 126 LHPKTLQVGGVLENECAELLQRFFQKLR 153


>gi|295398379|ref|ZP_06808419.1| cytidine/deoxycytidylate deaminase [Aerococcus viridans ATCC 11563]
 gi|294973332|gb|EFG49119.1| cytidine/deoxycytidylate deaminase [Aerococcus viridans ATCC 11563]
          Length = 175

 Score =  102 bits (255), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 60/143 (41%), Positives = 82/143 (57%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  A+EEA+ AA   E+P+GAV V   +II R  N     +D T HAEILAIR   R  
Sbjct: 19  FMEAAIEEAKKAAAIGEVPIGAVVVYQGEIIGRGHNLRETSQDATTHAEILAIREANRNR 78

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
           +   L + DLYVTLEPC MC+ A+  +RIR +Y+GA + KGG           +  +H  
Sbjct: 79  ASWRLADADLYVTLEPCPMCSGAMIQSRIRHVYFGAYDQKGGTAGTLMNLLDDSRFNHQV 138

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+  G+  +  + ++QDFF E R
Sbjct: 139 EVIGGVMHEECKALLQDFFIELR 161


>gi|158522041|ref|YP_001529911.1| CMP/dCMP deaminase zinc-binding [Desulfococcus oleovorans Hxd3]
 gi|158510867|gb|ABW67834.1| CMP/dCMP deaminase zinc-binding [Desulfococcus oleovorans Hxd3]
          Length = 146

 Score =  102 bits (255), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 58/143 (40%), Positives = 79/143 (55%), Gaps = 1/143 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  AL EA  A   +E+PVGAV V  + K++S   NR     D +AHAE+L IR   R  
Sbjct: 1   MELALVEAGKARDMDEVPVGAVLVSPDGKVLSADHNRPIAECDPSAHAEMLVIRRAARQA 60

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
           +   LP   LYVT+EPC MC  A+  ARI  + +G  +PK G   +   F   +  +HSP
Sbjct: 61  ANYRLPNTTLYVTVEPCVMCMGAVIHARIGTVVFGVHDPKWGAAGSLYDFTKHSALNHSP 120

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
            +  G+ E   R I+Q FF++RR
Sbjct: 121 AVVAGVCEDACRSILQAFFEQRR 143


>gi|28377565|ref|NP_784457.1| cytosine/adenosine deaminase [Lactobacillus plantarum WCFS1]
 gi|254555738|ref|YP_003062155.1| cytosine/adenosine deaminase [Lactobacillus plantarum JDM1]
 gi|300769759|ref|ZP_07079641.1| possible guanine deaminase [Lactobacillus plantarum subsp.
           plantarum ATCC 14917]
 gi|28270397|emb|CAD63300.1| cytosine/adenosine deaminase [Lactobacillus plantarum WCFS1]
 gi|254044665|gb|ACT61458.1| cytosine/adenosine deaminase [Lactobacillus plantarum JDM1]
 gi|300492667|gb|EFK27853.1| possible guanine deaminase [Lactobacillus plantarum subsp.
           plantarum ATCC 14917]
          Length = 168

 Score =  102 bits (255), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 54/140 (38%), Positives = 80/140 (57%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  AL EA+ A L  E+P+GAV V   +II R  N     +D T HAEI+AI+  C  L
Sbjct: 9   WMQEALHEARMAYLIGEVPIGAVIVHQGEIIGRGHNLREHGQDATMHAEIIAIQEACEYL 68

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  LYVTLEPC MC+ AI  AR+  LY+GA +PK G + +  Q       +H  
Sbjct: 69  HSWRLADCQLYVTLEPCLMCSGAIINARLPELYFGARDPKAGAVRSLYQVMDDTRLNHQV 128

Query: 127 EIYPGISEQRSRQIIQDFFK 146
            ++  I  + + +++++FF+
Sbjct: 129 TVHERILARPAGEMLENFFR 148


>gi|293379949|ref|ZP_06626050.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Lactobacillus crispatus 214-1]
 gi|290923462|gb|EFE00364.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Lactobacillus crispatus 214-1]
          Length = 156

 Score =  102 bits (255), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 52/143 (36%), Positives = 83/143 (58%), Gaps = 1/143 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNREL-KDVTAHAEILAIRMGCRIL 66
           M  A+++A+ A  + E+P+GAV V  +  +   G   REL +D T HAE++AI+  C  L
Sbjct: 1   MQLAIDQAKEAEKQGEVPIGAVVVDPDGRVVGTGYNRRELDEDATQHAEMIAIKEACSKL 60

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  L+VTLEPC MCA AI  +RI+ +Y+GA +PK G   +    +++   +H P
Sbjct: 61  GMWRLIDCSLFVTLEPCPMCAGAIINSRIKDVYFGALDPKAGACGSVVDLFSVEKFNHHP 120

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
               G+   +  Q+++DFF+  R
Sbjct: 121 HAIRGLYRDQCAQMLKDFFRAIR 143


>gi|329298459|ref|ZP_08255795.1| CMP/dCMP deaminase zinc-binding protein [Plautia stali symbiont]
          Length = 164

 Score =  102 bits (255), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 57/143 (39%), Positives = 79/143 (55%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  ALE A+ A  + E+PVGAV V  +++I    NR     D TAHAEI+A+R G +++
Sbjct: 9   WMRHALELARRAWEQGEVPVGAVLVQGDRVIGEGWNRPISQCDPTAHAEIMALRQGGKVI 68

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  LYVTLEPC MCA A+  +RI RL YGA + K G   +          +H  
Sbjct: 69  DNYRLLDTTLYVTLEPCVMCAGAMVHSRITRLVYGAKDEKTGAAGSLLDVIGHPGMNHQI 128

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           EI  G+       ++ DFF+ RR
Sbjct: 129 EIAHGVLAGECATLLSDFFRMRR 151


>gi|167629244|ref|YP_001679743.1| cytidine and deoxycytidylate deaminase zinc-binding region protein,
           putative [Heliobacterium modesticaldum Ice1]
 gi|167591984|gb|ABZ83732.1| cytidine and deoxycytidylate deaminase zinc-binding region protein,
           putative [Heliobacterium modesticaldum Ice1]
          Length = 152

 Score =  102 bits (255), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 57/145 (39%), Positives = 81/145 (55%), Gaps = 4/145 (2%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  ALEE + A  + E+P+G V V + ++I R  N     K+  AHAE+LAI+     +
Sbjct: 8   FMGLALEEGRQAYAKGEVPIGCVIVKDGEVIGRGHNLRETEKNPVAHAEVLAIQDAANRI 67

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT--CHH 124
               L    LYVT+EPC MCA AI LARI R+ +   +PKGG    GT F  L +   +H
Sbjct: 68  GGWRLAGATLYVTVEPCPMCAGAIVLARIPRVVFAVMDPKGGA--AGTCFNILESPWTNH 125

Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149
              +  G+ E  +R+++Q FF+  R
Sbjct: 126 RVSVISGVREGEARELMQSFFQRLR 150


>gi|326564207|gb|EGE14443.1| tRNA-specific adenosine deaminase [Moraxella catarrhalis 12P80B1]
          Length = 184

 Score =  102 bits (255), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 58/143 (40%), Positives = 81/143 (56%), Gaps = 1/143 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M+ ALE A+  A   EIPVGAV V   +I+    N     +D TAHAEI+A+R  C  L+
Sbjct: 32  MNHALEIAKQGAKFGEIPVGAVVVYEGRILGEGYNCPITTQDPTAHAEIVAVRRACETLN 91

Query: 68  QEILPE-VDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
              LP+   LYVTLEPCTMC  A+  ARI R+ +GA  PK G + +  +       +H  
Sbjct: 92  NYRLPKGCILYVTLEPCTMCFGALIHARISRVVFGAFEPKAGVVVSQLKLPEQVFYNHHL 151

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
            +Y G+   +S  ++  FF++RR
Sbjct: 152 SVYGGLLADKSSALLSGFFRQRR 174


>gi|227112728|ref|ZP_03826384.1| tRNA-specific adenosine deaminase [Pectobacterium carotovorum
           subsp. brasiliensis PBR1692]
          Length = 168

 Score =  102 bits (255), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 61/149 (40%), Positives = 78/149 (52%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           ++    +M  AL  AQ A    E+PVGAV VL+N+ I    NR     D TAHAEI+A+R
Sbjct: 4   LRNDEYWMRHALMLAQRAQDEGEVPVGAVLVLDNEAIGEGWNRPIGHHDPTAHAEIMALR 63

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
            G ++L    L E  LYVTLEPC MCA A+  +RI RL YGAS+ K G   +        
Sbjct: 64  QGGQVLQNYRLLETTLYVTLEPCIMCAGAMVHSRIGRLVYGASDEKTGAAGSLVDILRHP 123

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H   I  GI        +  FF+ RR
Sbjct: 124 GMNHQIVIESGILADECSATLSTFFRLRR 152


>gi|291549089|emb|CBL25351.1| Cytosine/adenosine deaminases [Ruminococcus torques L2-14]
          Length = 163

 Score =  102 bits (255), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 56/149 (37%), Positives = 80/149 (53%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M     +M  AL++A+ A    E P+G V V  +KII+R  NR    K+  AHAE+ AI+
Sbjct: 1   MTTDEKYMRAALKQAEKAYNLGETPIGCVIVHEDKIIARGYNRRNTDKNPLAHAEVAAIK 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              + L    L E  LYVTLEPC MCA AI  +RI R+  G  NPK G   +      + 
Sbjct: 61  KASKKLGDWRLEECTLYVTLEPCQMCAGAIVQSRIPRVVVGCMNPKAGCTGSILNLLDIQ 120

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  ++  G+ E+   Q+++ FF+E R
Sbjct: 121 AFNHQADLTTGVLEEECSQLMKQFFRELR 149


>gi|317120920|ref|YP_004100923.1| tRNA-adenosine deaminase [Thermaerobacter marianensis DSM 12885]
 gi|315590900|gb|ADU50196.1| tRNA-adenosine deaminase [Thermaerobacter marianensis DSM 12885]
          Length = 207

 Score =  102 bits (255), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 56/128 (43%), Positives = 73/128 (57%)

Query: 22  NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81
            E+PVGAVAV + +II+R  N    L D TAHAEIL +R     L    L  V LYVTLE
Sbjct: 63  GEVPVGAVAVHDGRIIARGHNLRERLGDPTAHAEILVLREAAARLGGWRLEGVTLYVTLE 122

Query: 82  PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141
           PC MCA AI LAR+ RL YGA +PK G   +          +H  E+  G+  + S  ++
Sbjct: 123 PCPMCAGAIVLARVPRLVYGAPDPKAGAAGSLMNLVQHDKLNHRVELRAGVLAEASAALL 182

Query: 142 QDFFKERR 149
           + FF++ R
Sbjct: 183 RGFFRQLR 190


>gi|288906283|ref|YP_003431505.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus
           gallolyticus UCN34]
 gi|306832338|ref|ZP_07465492.1| tRNA-specific adenosine deaminase [Streptococcus gallolyticus
           subsp. gallolyticus TX20005]
 gi|325979296|ref|YP_004289012.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus
           gallolyticus subsp. gallolyticus ATCC BAA-2069]
 gi|288733009|emb|CBI14590.1| putative cytidine/deoxycytidylate deaminase family protein
           [Streptococcus gallolyticus UCN34]
 gi|304425777|gb|EFM28895.1| tRNA-specific adenosine deaminase [Streptococcus gallolyticus
           subsp. gallolyticus TX20005]
 gi|325179224|emb|CBZ49268.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus
           gallolyticus subsp. gallolyticus ATCC BAA-2069]
          Length = 168

 Score =  102 bits (255), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 59/143 (41%), Positives = 78/143 (54%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  AL+EAQ +  + EIP+G V V N  II R  N   E +    HAEI+AI       
Sbjct: 12  FMREALKEAQKSLAKEEIPIGCVIVKNGVIIGRGHNAREERQKAILHAEIMAIDDANENE 71

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  L+VT+EPC MC+ AI LARI ++ YGA+N K GG  +     T    +H  
Sbjct: 72  GSWRLLDSTLFVTIEPCVMCSGAIGLARIPQVIYGAANQKFGGAGSLYDILTDVRLNHRV 131

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+  GI E     I+QDFF++ R
Sbjct: 132 EVETGILETECAAIMQDFFRKNR 154


>gi|297170608|gb|ADI21634.1| cytosine/adenosine deaminases [uncultured myxobacterium
           HF0130_06F04]
          Length = 159

 Score =  102 bits (255), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 56/151 (37%), Positives = 83/151 (54%), Gaps = 4/151 (2%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M +   +M  A  EA+ A    E+PVGA+ +  ++++ R  NR     D  AHAEILAI 
Sbjct: 1   MGRDESWMQAAFAEAEKARALGEVPVGALVIYEDRVVGRGFNRRETDHDPLAHAEILAIG 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              + L +  L   +LYVTLEPC MCA AI  +R+ RL +GA++P+ G    GT F  + 
Sbjct: 61  EAAKTLGRWRLSGCELYVTLEPCPMCAGAIVNSRLDRLVFGATDPRAGAA--GTVFDIVR 118

Query: 121 T--CHHSPEIYPGISEQRSRQIIQDFFKERR 149
               +H  E+  G+  +   +I+ DFF + R
Sbjct: 119 DQRLNHQVEVVSGVLGEPCSRILSDFFADLR 149


>gi|166368572|ref|YP_001660845.1| cytidine and deoxycytidylate deaminase [Microcystis aeruginosa
           NIES-843]
 gi|166090945|dbj|BAG05653.1| cytidine and deoxycytidylate deaminase [Microcystis aeruginosa
           NIES-843]
          Length = 162

 Score =  102 bits (255), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 58/144 (40%), Positives = 80/144 (55%), Gaps = 1/144 (0%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           +M  AL  A  A  R ++PVGAV V     +I++  N   +  D TAHAEILAIR   ++
Sbjct: 19  WMQLALNLAATAGDRGDVPVGAVIVDKQGHLIAQGANCKEKHHDPTAHAEILAIRAASQV 78

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           L    L +  LYVTLEPC MCA AI  AR+  L YGA +PK G I     F      +H 
Sbjct: 79  LGNWHLNDCTLYVTLEPCPMCAGAIIQARLGLLVYGADDPKTGVIRTVANFIDSPFSNHR 138

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
             +  GI  + S +++Q +F+++R
Sbjct: 139 LPVIAGILAKESGELLQTWFEKKR 162


>gi|313826960|gb|EFS64674.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Propionibacterium acnes HL063PA1]
          Length = 149

 Score =  102 bits (255), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 55/143 (38%), Positives = 80/143 (55%), Gaps = 1/143 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M+ AL+ A+ AA R ++P+GAV +  N +++S AGN      D TAHAE+LAIR      
Sbjct: 1   MTQALDVARRAATRGDVPIGAVILGANGEVLSEAGNERERTGDPTAHAEVLAIRRAAEAR 60

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  L VTLEPCTMCA  I  ARI R+ +GA +PK G + +           H P
Sbjct: 61  DGWRLGDCTLVVTLEPCTMCAGTIVAARIPRVVFGAFDPKAGAVSSLFDAMRDPRLPHRP 120

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           ++  G+  + S  ++++FF   R
Sbjct: 121 KVVTGVMAEESSALLREFFDGHR 143


>gi|253689423|ref|YP_003018613.1| CMP/dCMP deaminase zinc-binding [Pectobacterium carotovorum subsp.
           carotovorum PC1]
 gi|251756001|gb|ACT14077.1| CMP/dCMP deaminase zinc-binding [Pectobacterium carotovorum subsp.
           carotovorum PC1]
          Length = 165

 Score =  102 bits (255), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 61/149 (40%), Positives = 78/149 (52%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M     +M  AL  AQ A    E+PVGAV VL+N+ I    NR     D TAHAEI+A+R
Sbjct: 1   MSNDEYWMRYALTLAQRAQDEGEVPVGAVLVLDNEAIGEGWNRPIGHHDPTAHAEIMALR 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
            G ++L    L +  LYVTLEPC MCA A+  +RI RL YGAS+ K G   +        
Sbjct: 61  QGGQVLQNYRLLDTTLYVTLEPCIMCAGAMIHSRIGRLVYGASDEKTGAAGSLVDILRHP 120

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H   I  GI  +     +  FF+ RR
Sbjct: 121 GMNHQIVIESGILAEECSATLSAFFRLRR 149


>gi|315180919|gb|ADT87833.1| zinc-binding domain protein [Vibrio furnissii NCTC 11218]
          Length = 189

 Score =  102 bits (254), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 56/143 (39%), Positives = 76/143 (53%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  A+  A+ A    E+PVGAV V +  II+   NR+    D TAHAEI  +R     L
Sbjct: 15  FMRRAMALAEQAEAEGEVPVGAVLVKDGHIIAEGWNRSIGACDATAHAEIQVLRQAGEAL 74

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L E  LYVTLEPC MCA A+  +R++R+ YGA + K G        ++    +H  
Sbjct: 75  HNYRLLETTLYVTLEPCPMCAGALLHSRVKRIVYGAPDLKAGAAGTVLDLFSSQAAYHYA 134

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
            +  G+ E   RQ +Q FF+ RR
Sbjct: 135 TVEKGLLEDECRQQLQAFFQRRR 157


>gi|260776578|ref|ZP_05885473.1| tRNA-specific adenosine-34 deaminase [Vibrio coralliilyticus ATCC
           BAA-450]
 gi|260607801|gb|EEX34066.1| tRNA-specific adenosine-34 deaminase [Vibrio coralliilyticus ATCC
           BAA-450]
          Length = 169

 Score =  102 bits (254), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 54/143 (37%), Positives = 78/143 (54%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  A+E A  A    E+PVGAV V   +I++   N++    D TAHAE+  +R   ++L
Sbjct: 13  FMRRAMELAAQAEAEGEVPVGAVLVKGGEIVAEGWNQSIGHHDATAHAEMQVLRKAGQVL 72

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  LYVTLEPC MCA A+  +R++R+ YGA + K G        +     +H  
Sbjct: 73  ENYRLLDTTLYVTLEPCPMCAGALLHSRVKRIVYGAPDLKAGAAGTVLNLFEHQAAYHYA 132

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           +I  G+ E+  R  +Q FFK RR
Sbjct: 133 DIEQGLMEEECRGQLQAFFKRRR 155


>gi|257464722|ref|ZP_05629093.1| tRNA-adenosine deaminase [Actinobacillus minor 202]
 gi|257450382|gb|EEV24425.1| tRNA-adenosine deaminase [Actinobacillus minor 202]
          Length = 150

 Score =  102 bits (254), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 64/143 (44%), Positives = 78/143 (54%), Gaps = 1/143 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  AL  A  A    EIPVGAV V  + KI+    NR+  L D TAHAEI AIRM  + L
Sbjct: 1   MQYALSLADKAEQEGEIPVGAVLVDKSGKIVGEGWNRSIILSDPTAHAEIQAIRMAGQHL 60

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  LYVTLEPC MCA AI  +RI RL +GAS+ K G I +    +     +H  
Sbjct: 61  QNYRLLDTTLYVTLEPCPMCAGAILHSRIGRLVFGASDYKTGAIGSRFHLFEDYKMNHFL 120

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           +I  G+      Q I  FFK+RR
Sbjct: 121 QIRGGVMRDECSQKISAFFKKRR 143


>gi|229545278|ref|ZP_04434003.1| nucleoside deaminase [Enterococcus faecalis TX1322]
 gi|229309628|gb|EEN75615.1| nucleoside deaminase [Enterococcus faecalis TX1322]
          Length = 173

 Score =  102 bits (254), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 56/143 (39%), Positives = 78/143 (54%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  A+ EA+ A    E+P+GAV V   +II R  N     ++ TAHAE+ AI+  CR +
Sbjct: 16  FMREAIAEAKKAEGLAEVPIGAVIVRQGEIIGRGHNLREARQEATAHAEMYAIQEACRGI 75

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L E  L+VTLEPC MC+ A+ LARI  +YYGA++PK G              +H  
Sbjct: 76  ENWRLEETQLFVTLEPCPMCSGAMLLARIPEVYYGATDPKAGTAGTLMNLLEDERFNHVA 135

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
            +  G+ E+  R ++  FFK  R
Sbjct: 136 YVEAGVLEEECRLLLVQFFKRLR 158


>gi|153207852|ref|ZP_01946429.1| tRNA-specific adenosine deaminase [Coxiella burnetii 'MSU Goat
           Q177']
 gi|154706920|ref|YP_001424041.1| tRNA-specific adenosine deaminase [Coxiella burnetii Dugway
           5J108-111]
 gi|161830554|ref|YP_001596549.1| tRNA-specific adenosine deaminase [Coxiella burnetii RSA 331]
 gi|165918843|ref|ZP_02218929.1| tRNA-specific adenosine deaminase [Coxiella burnetii RSA 334]
 gi|212212896|ref|YP_002303832.1| tRNA-specific adenosine deaminase [Coxiella burnetii CbuG_Q212]
 gi|212219141|ref|YP_002305928.1| tRNA-specific adenosine deaminase [Coxiella burnetii CbuK_Q154]
 gi|215919009|ref|NP_819652.2| zinc-binding domain-containing protein [Coxiella burnetii RSA 493]
 gi|120576278|gb|EAX32902.1| tRNA-specific adenosine deaminase [Coxiella burnetii 'MSU Goat
           Q177']
 gi|154356206|gb|ABS77668.1| tRNA-specific adenosine deaminase [Coxiella burnetii Dugway
           5J108-111]
 gi|161762421|gb|ABX78063.1| tRNA-specific adenosine deaminase [Coxiella burnetii RSA 331]
 gi|165917475|gb|EDR36079.1| tRNA-specific adenosine deaminase [Coxiella burnetii RSA 334]
 gi|206583894|gb|AAO90166.2| tRNA-specific adenosine deaminase [Coxiella burnetii RSA 493]
 gi|212011306|gb|ACJ18687.1| tRNA-specific adenosine deaminase [Coxiella burnetii CbuG_Q212]
 gi|212013403|gb|ACJ20783.1| tRNA-specific adenosine deaminase [Coxiella burnetii CbuK_Q154]
          Length = 148

 Score =  102 bits (254), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 56/144 (38%), Positives = 80/144 (55%)

Query: 6   VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           +FM  AL  A+ A   NE+P+GAV V  N+I+    N    L D TAHAEILA+R   + 
Sbjct: 5   LFMHEALALAKKANENNEVPIGAVLVKENEIVGHGFNEPITLNDPTAHAEILALRNAAKR 64

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           +    L +  LYVTLEPC MC  A+  ARI+RL +GA +P+ G +E+  Q       +H 
Sbjct: 65  VGNYRLVDTTLYVTLEPCAMCVGAMIQARIKRLVFGAFDPRAGAVESVFQLLNEPRLNHR 124

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
                G+  +   + ++ FF+ RR
Sbjct: 125 IVWTSGVIAEACAEPLKAFFRARR 148


>gi|148262140|ref|YP_001228846.1| CMP/dCMP deaminase, zinc-binding [Geobacter uraniireducens Rf4]
 gi|146395640|gb|ABQ24273.1| tRNA-adenosine deaminase [Geobacter uraniireducens Rf4]
          Length = 176

 Score =  102 bits (254), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 55/143 (38%), Positives = 76/143 (53%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  A+ EA+ AA R E+P+GAV V + KIISR  N     +D  AHAE++AIR   + L
Sbjct: 25  WMGSAIREAEKAAERGEVPIGAVIVRDGKIISRGYNLREGKQDPAAHAELIAIRKAAKKL 84

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L    LYVTLEPC MC  AI LAR+ ++ +G  +PKGG   +          +H  
Sbjct: 85  GNWRLAGTTLYVTLEPCIMCMGAILLARVEKVVFGCYDPKGGAAGSLYDLSDDKRLNHRV 144

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
            +  GI +     ++  FF   R
Sbjct: 145 TLVAGIRQAECAALLSGFFAALR 167


>gi|331265454|ref|YP_004325084.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus
           oralis Uo5]
 gi|326682126|emb|CBY99742.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus
           oralis Uo5]
          Length = 155

 Score =  102 bits (254), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 61/145 (42%), Positives = 82/145 (56%), Gaps = 4/145 (2%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  AL+EA+ A   +EIP+G V V + +II R  N   EL+    HAEI+AI      L
Sbjct: 11  FMREALKEAEIALEHDEIPIGCVIVKDGEIIGRGHNAREELQRAVMHAEIMAIENAN--L 68

Query: 67  SQEILPEVD--LYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
           S+E    +D  L+VT+EPC MC+ AI LARI ++ YGA N K G   +     T    +H
Sbjct: 69  SEESWRLLDCTLFVTIEPCVMCSGAIGLARIPKVVYGAKNQKFGAAGSLYDILTDERLNH 128

Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149
             E+  G+ E     I+QDFF+ RR
Sbjct: 129 RVEVETGVLESECAAIMQDFFRNRR 153


>gi|315222391|ref|ZP_07864296.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Streptococcus anginosus F0211]
 gi|315188552|gb|EFU22262.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Streptococcus anginosus F0211]
          Length = 155

 Score =  102 bits (254), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 58/143 (40%), Positives = 79/143 (55%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  AL+EA+ A   +EIP+G V V + KII    N   EL+    HAE++AI       
Sbjct: 11  FMLEALKEAEIALANDEIPIGCVIVKDGKIIGHGHNAREELQRAVMHAEVMAIEEANAYE 70

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  L+VT+EPC MC+ AI LARI ++ YGA N K G   +     T    +H  
Sbjct: 71  KSWRLLDTTLFVTIEPCVMCSGAIGLARIPQVIYGAKNQKFGAAGSLYDILTDERLNHRV 130

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+  GI E    Q++QDFF++RR
Sbjct: 131 ELENGILEAECAQMMQDFFRKRR 153


>gi|332754092|gb|EGJ84463.1| tRNA-specific adenosine deaminase [Shigella flexneri 4343-70]
          Length = 178

 Score =  102 bits (254), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 57/143 (39%), Positives = 78/143 (54%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  AL  A+ A    E+PVGAV V NN++I    NR     D TAHAEI+A+R G  ++
Sbjct: 22  WMRHALTLAKRAWDEREVPVGAVLVHNNRVIGEGWNRPIGRHDPTAHAEIMALRQGGLVM 81

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  LYVTLEPC MCA A+  +RI R+ +GA + K G + +          +H  
Sbjct: 82  QNYRLIDATLYVTLEPCVMCAGAMIHSRIGRVVFGARDAKTGAVGSLMDVLHHPGMNHRV 141

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           EI  GI       ++ DFF+ RR
Sbjct: 142 EITEGILADECAALLSDFFRMRR 164


>gi|326560462|gb|EGE10844.1| tRNA-specific adenosine deaminase [Moraxella catarrhalis 7169]
          Length = 159

 Score =  102 bits (254), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 58/143 (40%), Positives = 81/143 (56%), Gaps = 1/143 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M+ ALE A+  A   EIPVGAV V   +I+    N     +D TAHAEI+A+R  C  L+
Sbjct: 7   MNHALEIAKQGAKFGEIPVGAVVVYEGRILGEGYNCPITTQDPTAHAEIVAVRRACETLN 66

Query: 68  QEILPE-VDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
              LP+   LYVTLEPCTMC  A+  ARI R+ +GA  PK G + +  +       +H  
Sbjct: 67  NYRLPKGCILYVTLEPCTMCFGALIHARISRVVFGAFEPKAGVVVSQLKLPEQVFYNHHL 126

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
            +Y G+   +S  ++  FF++RR
Sbjct: 127 SVYGGLLADKSSALLSGFFRQRR 149


>gi|322391142|ref|ZP_08064614.1| tRNA-specific adenosine deaminase [Streptococcus peroris ATCC
           700780]
 gi|321145895|gb|EFX41284.1| tRNA-specific adenosine deaminase [Streptococcus peroris ATCC
           700780]
          Length = 166

 Score =  102 bits (254), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 61/151 (40%), Positives = 84/151 (55%), Gaps = 4/151 (2%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +++   FM  AL+EA+ A   +EIP+G V V + KII R  N   EL+    HAEI+AI 
Sbjct: 16  LEEKEAFMREALKEAEIALEHDEIPIGCVIVKDGKIIGRGHNAREELQRAVMHAEIMAIE 75

Query: 61  MGCRILSQEILPEVD--LYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
                LS+E    +D  L+VT+EPC MC+ AI LARI  + YGA N K G   +     T
Sbjct: 76  DAN--LSEESWRLLDCTLFVTIEPCVMCSGAIGLARIPNVVYGAKNQKFGAAGSLYDILT 133

Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
               +H  ++  G+ E     I+QDFF+ RR
Sbjct: 134 DERLNHRVDVETGVLESECAAIMQDFFRNRR 164


>gi|315146338|gb|EFT90354.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Enterococcus faecalis TX4244]
          Length = 173

 Score =  102 bits (254), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 56/143 (39%), Positives = 78/143 (54%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  A+ EA+ A    E+P+GAV V   +II R  N      + TAHAE+ AI+  CR +
Sbjct: 16  FMREAIAEAKKAEGLAEVPIGAVIVRQGEIIGRGHNLREARHEATAHAEMYAIQEACRGI 75

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L E  L+VTLEPC MC+ A+ LARI  +YYGA++PK G              +H  
Sbjct: 76  ENWRLEETQLFVTLEPCPMCSGAMLLARIPEVYYGATDPKAGTAGTLMNLLEDERFNHVA 135

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
            +  G+ E+  R ++  FFK+ R
Sbjct: 136 YVEAGVLEEECRLLLVQFFKKLR 158


>gi|260771319|ref|ZP_05880245.1| tRNA-specific adenosine-34 deaminase [Vibrio furnissii CIP 102972]
 gi|260613635|gb|EEX38828.1| tRNA-specific adenosine-34 deaminase [Vibrio furnissii CIP 102972]
          Length = 189

 Score =  102 bits (254), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 56/143 (39%), Positives = 76/143 (53%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  A+  A+ A    E+PVGAV V +  II+   NR+    D TAHAEI  +R     L
Sbjct: 15  FMRRAMALAEQAEAEGEVPVGAVLVKDGHIIAEGWNRSIGACDATAHAEIQVLRQAGEAL 74

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L E  LYVTLEPC MCA A+  +R++R+ YGA + K G        ++    +H  
Sbjct: 75  HNYRLLETTLYVTLEPCPMCAGALLHSRVKRIVYGAPDLKAGAAGTVLDLFSSQAAYHYA 134

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
            +  G+ E   RQ +Q FF+ RR
Sbjct: 135 TVEKGLLEDECRQQLQAFFQRRR 157


>gi|255067649|ref|ZP_05319504.1| tRNA-specific adenosine deaminase [Neisseria sicca ATCC 29256]
 gi|255048123|gb|EET43587.1| tRNA-specific adenosine deaminase [Neisseria sicca ATCC 29256]
          Length = 243

 Score =  102 bits (254), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 60/143 (41%), Positives = 80/143 (55%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  AL +A+ +A   EIPVGAV V NN+II+ A N      D++ HAEI A+      L
Sbjct: 98  FMRAALTQAEQSASIGEIPVGAVVVSNNQIIAAAHNTCVSDHDISRHAEIRALAAAGAAL 157

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L   DLY+TLEPC MCA+AI  AR+RR+ YGA+ PK G   +    +     +   
Sbjct: 158 QNYRLDGCDLYITLEPCAMCASAIIQARVRRVIYGAAEPKTGAAGSVVNLFANPLLNKHT 217

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
            I  GI E   + ++Q FF+ RR
Sbjct: 218 AIKGGILEDECKAVLQAFFQTRR 240


>gi|51597197|ref|YP_071388.1| tRNA-specific adenosine deaminase [Yersinia pseudotuberculosis IP
           32953]
 gi|186896294|ref|YP_001873406.1| tRNA-specific adenosine deaminase [Yersinia pseudotuberculosis
           PB1/+]
 gi|51590479|emb|CAH22119.1| putative zinc-binding protein [Yersinia pseudotuberculosis IP
           32953]
 gi|186699320|gb|ACC89949.1| CMP/dCMP deaminase zinc-binding [Yersinia pseudotuberculosis PB1/+]
          Length = 187

 Score =  102 bits (254), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 59/143 (41%), Positives = 77/143 (53%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  AL  A  A    E+PVGAV VL NK+I    NR     D TAHAEI+A+R G + +
Sbjct: 28  WMRHALTLALRAQEEGEVPVGAVLVLGNKVIGEGWNRPIRDNDPTAHAEIMALRQGGQAV 87

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  LYVTLEPC MCA A+  +RIRRL YGA++ K G   +          +H  
Sbjct: 88  QNYRLLDATLYVTLEPCVMCAGAMVHSRIRRLVYGANDVKTGAAGSLVDILRHPGMNHQI 147

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+  GI        +  FF++RR
Sbjct: 148 EVSAGILATACSHQLSAFFRQRR 170


>gi|307706899|ref|ZP_07643700.1| tRNA-specific adenosine deaminase [Streptococcus mitis SK321]
 gi|307617691|gb|EFN96857.1| tRNA-specific adenosine deaminase [Streptococcus mitis SK321]
          Length = 155

 Score =  102 bits (254), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 63/151 (41%), Positives = 83/151 (54%), Gaps = 4/151 (2%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +++  VFM  AL EA+ A   +EIP+G V V   +II R  N   EL+    HAEI+AI 
Sbjct: 5   VEEKEVFMREALREAEIALEHDEIPIGCVIVKEGEIIGRGHNAREELQRAVMHAEIMAIE 64

Query: 61  MGCRILSQEILPEVD--LYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
                LS+E    +D  L+VT+EPC MC+ AI LARI  + YGA N K G   +     T
Sbjct: 65  NAN--LSEESWRLLDCTLFVTIEPCVMCSGAIGLARIPNVVYGAKNQKFGAAGSLYDILT 122

Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
               +H  E+  GI E     I+QDFF+ RR
Sbjct: 123 DERLNHRVEVETGILEDECAAIMQDFFRNRR 153


>gi|289166926|ref|YP_003445193.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus
           mitis B6]
 gi|288906491|emb|CBJ21321.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus
           mitis B6]
          Length = 155

 Score =  102 bits (254), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 62/151 (41%), Positives = 83/151 (54%), Gaps = 4/151 (2%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +++  VFM  AL EA  A   +EIP+G V V + +II R  N   EL+    HAEI+AI 
Sbjct: 5   VEEKEVFMREALREADIALEHDEIPIGCVIVKDGEIIGRGHNAREELQRAVMHAEIMAIE 64

Query: 61  MGCRILSQEILPEVD--LYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
                LS+E    +D  L+VT+EPC MC+ AI LARI  + YGA N K G   +     T
Sbjct: 65  NAN--LSEESWRLIDCTLFVTIEPCVMCSGAIGLARIPNVVYGAKNQKFGAAGSLYDILT 122

Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
               +H  ++  GI E     I+QDFF+ RR
Sbjct: 123 DERLNHRVDVETGILEDECAAIMQDFFRNRR 153


>gi|254412813|ref|ZP_05026586.1| Cytidine and deoxycytidylate deaminase zinc-binding region domain
           protein [Microcoleus chthonoplastes PCC 7420]
 gi|196180548|gb|EDX75539.1| Cytidine and deoxycytidylate deaminase zinc-binding region domain
           protein [Microcoleus chthonoplastes PCC 7420]
          Length = 186

 Score =  102 bits (254), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 60/149 (40%), Positives = 84/149 (56%), Gaps = 1/149 (0%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIR 60
           +K   +M+ +L  AQ+A    E+PVGAV + N + +I+   NR    +D TAHAEILA+R
Sbjct: 11  QKHRHWMNRSLAIAQSAGEAGEVPVGAVIIDNQDNLIATGENRRERDRDPTAHAEILALR 70

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              + L+   L    LYVTLEPC MC+ AI LAR+  L YGA +PK G I         A
Sbjct: 71  AAGQALNTWHLNTCTLYVTLEPCAMCSGAIILARLGLLVYGADDPKTGTIRTVANSPDSA 130

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H   +  GI E   R+ ++ +F +RR
Sbjct: 131 YSNHRLPVLAGIMETECREYLKSWFAQRR 159


>gi|187776528|ref|ZP_02993001.1| hypothetical protein CLOSPO_00031 [Clostridium sporogenes ATCC
           15579]
 gi|187775187|gb|EDU38989.1| hypothetical protein CLOSPO_00031 [Clostridium sporogenes ATCC
           15579]
          Length = 148

 Score =  102 bits (254), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 61/148 (41%), Positives = 83/148 (56%), Gaps = 7/148 (4%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           N ++  A+ EA+ A    E+PVGAV V  NKII+++ N   ELKD TAHAE+LAI+  C+
Sbjct: 2   NSYIEYAIIEAKKALAIGEVPVGAVIVKENKIIAKSHNLKEELKDPTAHAEVLAIKKACK 61

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG---IENGTQFYTLAT 121
           IL    L    +YVTLEPC MCA+AI  +RI  L+ G  +P GG    + N T    L +
Sbjct: 62  ILGNWRLKGCKMYVTLEPCAMCASAIIQSRISELHIGTFDPVGGACGSVVNITNNSYLKS 121

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
                 +Y         +II +FF+  R
Sbjct: 122 NLTIKWLY----NDECSKIITNFFQNIR 145


>gi|251794142|ref|YP_003008873.1| CMP/dCMP deaminase zinc-binding [Paenibacillus sp. JDR-2]
 gi|247541768|gb|ACS98786.1| CMP/dCMP deaminase zinc-binding [Paenibacillus sp. JDR-2]
          Length = 156

 Score =  102 bits (254), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 52/148 (35%), Positives = 80/148 (54%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           ++   +M  A+EEA+ A    E+P+GA+ V N +++ R  N      D TAHAE++AIR 
Sbjct: 5   QEDQAWMQLAIEEAKKAEQIGEVPIGAILVKNGEVVGRGYNLRETNHDPTAHAEMVAIRE 64

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
            C  L    L +  LYVTLEPC MCA AI  +R++R+ YG  +PK G             
Sbjct: 65  ACERLGAWRLLDCTLYVTLEPCPMCAGAIVQSRVKRVVYGTGDPKAGCAGTLMNLLQEPR 124

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H  E+  G+ +    +++ +FF+  R
Sbjct: 125 FNHETELTSGVLQAECAELLTNFFRNLR 152


>gi|226226900|ref|YP_002761006.1| putative deaminase [Gemmatimonas aurantiaca T-27]
 gi|226090091|dbj|BAH38536.1| putative deaminase [Gemmatimonas aurantiaca T-27]
          Length = 144

 Score =  102 bits (254), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 58/128 (45%), Positives = 72/128 (56%), Gaps = 2/128 (1%)

Query: 24  IPVGAVAVLN--NKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81
           +PVGAV +     +II RA NR R   D TAHAE+LA+R   RI     L E  L VTLE
Sbjct: 17  VPVGAVVMRTETGEIIVRAQNRMRRDGDATAHAEVLALREAARIAGDARLGEFTLVVTLE 76

Query: 82  PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141
           PC MCA AI LARI  L +GA + K G   +       A  +H P +  G+ E  +R ++
Sbjct: 77  PCAMCAGAIVLARIGALAFGAWDEKAGMCGSVGDIVRHARLNHRPAVQGGVLESENRALL 136

Query: 142 QDFFKERR 149
           Q FF ERR
Sbjct: 137 QQFFAERR 144


>gi|170023497|ref|YP_001720002.1| tRNA-specific adenosine deaminase [Yersinia pseudotuberculosis
           YPIII]
 gi|169750031|gb|ACA67549.1| CMP/dCMP deaminase zinc-binding [Yersinia pseudotuberculosis YPIII]
          Length = 187

 Score =  102 bits (254), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 59/143 (41%), Positives = 77/143 (53%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  AL  A  A    E+PVGAV VL NK+I    NR     D TAHAEI+A+R G + +
Sbjct: 28  WMRHALTLALRAQEEGEVPVGAVLVLGNKVIGEGWNRPIRDNDPTAHAEIMALRQGGQAV 87

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  LYVTLEPC MCA A+  +RIRRL YGA++ K G   +          +H  
Sbjct: 88  QNYRLLDATLYVTLEPCVMCAGAMVHSRIRRLVYGANDVKTGAAGSLVDILRHPGMNHQI 147

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+  GI        +  FF++RR
Sbjct: 148 EVSAGILATACSHQLSAFFRQRR 170


>gi|161506947|ref|YP_001576901.1| cytidine/deoxycytidylate deaminase, zinc-binding region
           [Lactobacillus helveticus DPC 4571]
 gi|160347936|gb|ABX26610.1| Cytidine/deoxycytidylate deaminase, zinc-binding region
           [Lactobacillus helveticus DPC 4571]
          Length = 168

 Score =  102 bits (254), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 52/144 (36%), Positives = 82/144 (56%), Gaps = 1/144 (0%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           +M  A+++A+ A  + E+P+GAV V    K+I    NR    +D T HAE++AI+  C  
Sbjct: 10  YMELAIDQAKEAEKQGEVPIGAVVVDPEGKVIGTGYNRRELDEDSTQHAEMIAIKEACHN 69

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           L    L +  L+VTLEPC MCA AI  +RI+ +Y+GA +PK G   +    + +   +H 
Sbjct: 70  LGMWRLIDCSLFVTLEPCPMCAGAIINSRIKNVYFGALDPKAGACGSVVDLFEVEKFNHH 129

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
           P    G+   +  Q+++DFF+  R
Sbjct: 130 PHSIRGLYRDQCAQMLKDFFRAIR 153


>gi|119485470|ref|ZP_01619798.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [Lyngbya
           sp. PCC 8106]
 gi|119457226|gb|EAW38352.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [Lyngbya
           sp. PCC 8106]
          Length = 161

 Score =  102 bits (254), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 60/144 (41%), Positives = 79/144 (54%), Gaps = 1/144 (0%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           +M  ALE A++A    E+PVGAV +    ++++ A NR     D TAHAEIL +R   + 
Sbjct: 10  WMKRALELARSAGEAGEVPVGAVIINPQGQLLAEAENRRERDNDPTAHAEILVLRQAGQK 69

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           L    L +  LYVTLEPC MCA AI  ARI+ L YG  +PK G I         A   H 
Sbjct: 70  LKDWHLNQCTLYVTLEPCPMCAGAIVQARIQLLVYGVDDPKTGTIRTVANIPDSAYSFHR 129

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
            ++  GI E   RQ +Q +F +RR
Sbjct: 130 LQVLGGILESACRQQLQSWFAQRR 153


>gi|54307981|ref|YP_129001.1| putative cytosine/adenosine deaminase [Photobacterium profundum
           SS9]
 gi|46912407|emb|CAG19199.1| Putative cytosine/adenosine deaminase [Photobacterium profundum
           SS9]
          Length = 171

 Score =  102 bits (254), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 52/143 (36%), Positives = 80/143 (55%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  A+E A  A    E+PVGAV V N +++    NR+    D TAHAE++A+R   +++
Sbjct: 13  YMRRAIELASQAEAEGEVPVGAVVVYNGQVVGEGWNRSIGQHDATAHAEMMALRQAGKVV 72

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  LYVTLEPC MCA A+  +RI ++ +GAS+ K G   +     +    +H  
Sbjct: 73  QNYRLLDATLYVTLEPCPMCAGAMVHSRIGKVIFGASDLKTGAAGSVMNLLSYDEVNHHV 132

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           +   G+ ++  R  +Q FFK RR
Sbjct: 133 DCQSGVLDEECRAQLQAFFKRRR 155


>gi|153948638|ref|YP_001400126.1| tRNA-specific adenosine deaminase [Yersinia pseudotuberculosis IP
           31758]
 gi|152960133|gb|ABS47594.1| tRNA-specific adenosine deaminase [Yersinia pseudotuberculosis IP
           31758]
          Length = 200

 Score =  102 bits (254), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 59/143 (41%), Positives = 77/143 (53%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  AL  A  A    E+PVGAV VL NK+I    NR     D TAHAEI+A+R G + +
Sbjct: 41  WMRHALTLALRAQEEGEVPVGAVLVLGNKVIGEGWNRPIRDNDPTAHAEIMALRQGGQAV 100

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  LYVTLEPC MCA A+  +RIRRL YGA++ K G   +          +H  
Sbjct: 101 QNYRLLDATLYVTLEPCVMCAGAMVHSRIRRLVYGANDVKTGAAGSLVDILRHPGMNHQI 160

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+  GI        +  FF++RR
Sbjct: 161 EVSAGILATACSHQLSAFFRQRR 183


>gi|326798488|ref|YP_004316307.1| CMP/dCMP deaminase zinc-binding protein [Sphingobacterium sp. 21]
 gi|326549252|gb|ADZ77637.1| CMP/dCMP deaminase zinc-binding protein [Sphingobacterium sp. 21]
          Length = 156

 Score =  102 bits (254), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 56/145 (38%), Positives = 82/145 (56%), Gaps = 9/145 (6%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  AL EAQ A   +E+P+GAV V + KII+R  N    L DVTAHAE+ A       +
Sbjct: 18  FMKEALREAQKAFDADEVPIGAVIVHDGKIIARGHNLTETLNDVTAHAEMQAFTAAANYI 77

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT--CHH 124
             + L +  LYVT+EPC MCA A   ++I+R+ +GA + K G       + T++    H 
Sbjct: 78  GGKYLKDCTLYVTIEPCVMCAGASYWSQIKRIVFGARDEKRG-------YATISKDIVHP 130

Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149
              +  GI E+  R+++Q FF+ +R
Sbjct: 131 KTTVVSGIMEETCRELMQRFFQLKR 155


>gi|260437836|ref|ZP_05791652.1| tRNA-specific adenosine deaminase [Butyrivibrio crossotus DSM 2876]
 gi|292809861|gb|EFF69066.1| tRNA-specific adenosine deaminase [Butyrivibrio crossotus DSM 2876]
          Length = 157

 Score =  102 bits (254), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 53/143 (37%), Positives = 79/143 (55%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  A+ +A+ A   NE+P+G V V + KII+R  NR    K   AHAEI+AI+   +++
Sbjct: 7   FMKEAIRQAKKAEKLNEVPIGCVIVYDGKIIARGYNRRNTDKSTLAHAEIIAIKRASKVI 66

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  LYVTLEPC MCA AI  ARI ++  G  N K G   +      +   +H  
Sbjct: 67  KDWRLEDCTLYVTLEPCQMCAGAIVQARIPKVVIGTMNSKAGCAGSVINVLQMKEFNHQV 126

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           +I  G+     ++++Q+FF+  R
Sbjct: 127 DICKGVLADECKEMMQNFFRNLR 149


>gi|323143534|ref|ZP_08078213.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Succinatimonas hippei YIT 12066]
 gi|322416695|gb|EFY07350.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Succinatimonas hippei YIT 12066]
          Length = 175

 Score =  102 bits (254), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 59/144 (40%), Positives = 83/144 (57%), Gaps = 1/144 (0%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNK-IISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           FMS AL +A++A    EIPVGAV V   K I+S   NR     D  AHAEI+A+R   +I
Sbjct: 9   FMSLALSQARHAWDLGEIPVGAVIVNAAKEIVSVGCNRTIIDNDPCAHAEIVALRNAGKI 68

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           L    L ++ +YVTLEPC MC+ A+  AR++RL YGA +PK G   +       +  +H 
Sbjct: 69  LDTYRLTDLTMYVTLEPCCMCSGALIHARLKRLVYGAKDPKTGACGSVFDILIDSRHNHK 128

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
            ++  G+ E     +++ FFK RR
Sbjct: 129 IDVEGGVLESSCSDLLKSFFKMRR 152


>gi|320176139|gb|EFW51206.1| tRNA-specific adenosine-34 deaminase [Shigella dysenteriae CDC
           74-1112]
          Length = 178

 Score =  102 bits (254), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 57/143 (39%), Positives = 78/143 (54%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  AL  A+ A    E+PVGAV V NN++I    NR     D TAHAEI+A+R G  ++
Sbjct: 22  WMRHALTLAKRAWDEREVPVGAVLVHNNRVIGEGWNRPIGRHDPTAHAEIMALRQGGLVM 81

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  LYVTLEPC MCA A++ +RI R+ +GA + K G   +          +H  
Sbjct: 82  QNYRLIDATLYVTLEPCVMCAGAMTHSRIGRVVFGARDAKTGAAGSLMDVLHHPGMNHRV 141

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           EI  GI       ++ DFF+ RR
Sbjct: 142 EITEGILADECAALLSDFFRMRR 164


>gi|81427949|ref|YP_394948.1| putative cytidine deaminase [Lactobacillus sakei subsp. sakei 23K]
 gi|78609590|emb|CAI54636.1| Putative cytidine deaminase [Lactobacillus sakei subsp. sakei 23K]
          Length = 172

 Score =  102 bits (254), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 52/139 (37%), Positives = 76/139 (54%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  A++EA  A +  E+P+GAV V + +II R  N     +D T HAEI+AI+  C + 
Sbjct: 11  WMQVAIDEANQARIIGEVPIGAVIVKDGQIIGRGHNIREHAQDATLHAEIIAIQEACMVE 70

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  ++VTLEPC MCA AI  +RI  +Y+GAS+PK G         T    +H  
Sbjct: 71  KSWRLEDTAIFVTLEPCPMCAGAIINSRIPNVYFGASDPKAGVTGTLMNLLTDKRFNHQA 130

Query: 127 EIYPGISEQRSRQIIQDFF 145
            +  G+ E     ++Q FF
Sbjct: 131 TVVAGVREAECAALLQTFF 149


>gi|254786582|ref|YP_003074011.1| cytidine and deoxycytidylate deaminase family protein
           [Teredinibacter turnerae T7901]
 gi|237687430|gb|ACR14694.1| cytidine and deoxycytidylate deaminase family protein
           [Teredinibacter turnerae T7901]
          Length = 164

 Score =  102 bits (253), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 58/143 (40%), Positives = 78/143 (54%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M+ AL  A+ AA + E+PVGAV V +  II R  N      D + HAEI A+R   +  
Sbjct: 8   WMTEALVLAREAAAQGEVPVGAVLVQDGAIIGRGSNNPIGSCDASGHAEICALRDAGQRQ 67

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               LP   LYVT+EPCTMC  AI  ARI R+ +GA  PK G +E+  +  +    +H  
Sbjct: 68  KNYRLPNATLYVTIEPCTMCLGAIVHARIARVVFGAPEPKAGVLESNPELLSAKYFNHEF 127

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
               G+  Q   ++IQ FFK RR
Sbjct: 128 AWSGGVCAQECSELIQQFFKFRR 150


>gi|256420111|ref|YP_003120764.1| CMP/dCMP deaminase zinc-binding [Chitinophaga pinensis DSM 2588]
 gi|256035019|gb|ACU58563.1| CMP/dCMP deaminase zinc-binding [Chitinophaga pinensis DSM 2588]
          Length = 146

 Score =  102 bits (253), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 58/145 (40%), Positives = 83/145 (57%), Gaps = 7/145 (4%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  AL EA+ A    E+PVGA+ VL++KII +  N+   L D TAHAE+LA+      L
Sbjct: 6   YMQQALREARKAFDAGEVPVGAIVVLSDKIIGKGSNQVEMLNDCTAHAEMLALTAAFNYL 65

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC--HH 124
             + L E  LYVTLEPC MCA A+  ++I R+ Y A + K     N  +    AT   H 
Sbjct: 66  GSKYLMEATLYVTLEPCLMCAGALYWSKIGRIVYAAKDEK-----NSYRRVAGATSPFHP 120

Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149
             ++  G  E+ S Q+++ FF++RR
Sbjct: 121 KTKVEQGPCEEESLQLVKTFFEQRR 145


>gi|323465896|gb|ADX69583.1| Cytidine/deoxycytidylate deaminase, zinc-binding region
           [Lactobacillus helveticus H10]
 gi|328462872|gb|EGF34721.1| cytidine/deoxycytidylate deaminase, zinc-binding region
           [Lactobacillus helveticus MTCC 5463]
          Length = 168

 Score =  102 bits (253), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 52/144 (36%), Positives = 82/144 (56%), Gaps = 1/144 (0%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           +M  A+++A+ A  + E+P+GAV V    K+I    NR    +D T HAE++AI+  C  
Sbjct: 10  YMELAIDQAKEAEKQGEVPIGAVVVDPEGKVIGTGYNRRELDEDSTQHAEMIAIKEACHN 69

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           L    L +  L+VTLEPC MCA AI  +RI+ +Y+GA +PK G   +    + +   +H 
Sbjct: 70  LGMWRLIDCSLFVTLEPCPMCAGAIINSRIKDVYFGALDPKAGACGSVVDLFEVEKFNHH 129

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
           P    G+   +  Q+++DFF+  R
Sbjct: 130 PHSIRGLYRDQCAQMLKDFFRAIR 153


>gi|15601943|ref|NP_245015.1| hypothetical protein PM0078 [Pasteurella multocida subsp. multocida
           str. Pm70]
 gi|12720287|gb|AAK02162.1| unknown [Pasteurella multocida subsp. multocida str. Pm70]
          Length = 166

 Score =  102 bits (253), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 60/144 (41%), Positives = 81/144 (56%), Gaps = 1/144 (0%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           +M  AL  A  A    EIPVGAV V     ++    N +    D TAHAEI+A+R G + 
Sbjct: 9   WMRHALRLADKAEQLGEIPVGAVLVDEQGNLLGEGWNLSISESDPTAHAEIVALRQGGQR 68

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           L    L    LYVTLEPCTMCA AI  +RI+RL +GAS+ K G + +   F+     +H+
Sbjct: 69  LQNYRLLNTTLYVTLEPCTMCAGAILHSRIKRLVFGASDYKTGAVGSRFHFFDDYKMNHA 128

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
            EI  G+ ++   Q I  FF++RR
Sbjct: 129 IEITAGVLQEECSQKISAFFQKRR 152


>gi|154505232|ref|ZP_02041970.1| hypothetical protein RUMGNA_02745 [Ruminococcus gnavus ATCC 29149]
 gi|153794430|gb|EDN76850.1| hypothetical protein RUMGNA_02745 [Ruminococcus gnavus ATCC 29149]
          Length = 179

 Score =  102 bits (253), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 54/149 (36%), Positives = 81/149 (54%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M +   +M  A+ +A+ A    E+P+G V V  +KII R  NR    K+  AHAE+ AIR
Sbjct: 20  MNQDEKYMREAIRQAKKAYALEEVPIGCVIVYQDKIIGRGYNRRTVDKNTLAHAELQAIR 79

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              + +    L +  +YVTLEPC MC+ AI  ARI+R+  G  NPK G   +      + 
Sbjct: 80  KASKKMDDWRLEDCTMYVTLEPCQMCSGAIVQARIKRVVVGCMNPKAGCAGSILNLLDMK 139

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  E+  G+ E++   +++ FFKE R
Sbjct: 140 EFNHQVELTTGVLEEQCSGMMKQFFKELR 168


>gi|189499637|ref|YP_001959107.1| CMP/dCMP deaminase zinc-binding [Chlorobium phaeobacteroides BS1]
 gi|189495078|gb|ACE03626.1| CMP/dCMP deaminase zinc-binding [Chlorobium phaeobacteroides BS1]
          Length = 156

 Score =  102 bits (253), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 56/144 (38%), Positives = 78/144 (54%), Gaps = 1/144 (0%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           FM  A  EA  A  + E+PVGAV    N  II R  N+   L D TAHAE++A+      
Sbjct: 6   FMEPAFREAIKAYEKKEVPVGAVVFDANGHIIGRGYNQVEALTDATAHAEMIALTSAMAT 65

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           L  + L +  L VTLEPC MCA AI  A++ R+ +GA + K G              +H 
Sbjct: 66  LGSKYLSDCTLAVTLEPCPMCAGAIVNAKVGRVVFGAYDAKMGACGTVMNITASRDLNHQ 125

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
           PE+Y GI E +++ ++Q+FF+  R
Sbjct: 126 PEVYGGILEHKAQSLLQEFFRGLR 149


>gi|326560079|gb|EGE10469.1| tRNA-specific adenosine deaminase [Moraxella catarrhalis 46P47B1]
 gi|326561665|gb|EGE12002.1| tRNA-specific adenosine deaminase [Moraxella catarrhalis 103P14B1]
 gi|326565806|gb|EGE15968.1| tRNA-specific adenosine deaminase [Moraxella catarrhalis BC1]
 gi|326570459|gb|EGE20499.1| tRNA-specific adenosine deaminase [Moraxella catarrhalis BC8]
 gi|326573436|gb|EGE23404.1| tRNA-specific adenosine deaminase [Moraxella catarrhalis 101P30B1]
          Length = 181

 Score =  102 bits (253), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 58/143 (40%), Positives = 81/143 (56%), Gaps = 1/143 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M+ ALE A+  A   EIPVGAV V   +I+    N     +D TAHAEI+A+R  C  L+
Sbjct: 29  MNRALEIAKQGAKFGEIPVGAVVVYEGRILGEGYNCPITTQDPTAHAEIVAVRRACETLN 88

Query: 68  QEILPE-VDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
              LP+   LYVTLEPCTMC  A+  ARI R+ +GA  PK G + +  +       +H  
Sbjct: 89  NYRLPKGCILYVTLEPCTMCFGALIHARISRVVFGAFEPKAGVVVSQLKLPEQVFYNHHL 148

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
            +Y G+   +S  ++  FF++RR
Sbjct: 149 SVYGGLLADKSSALLSGFFRQRR 171


>gi|323499761|ref|ZP_08104720.1| tRNA-specific adenosine-34 deaminase [Vibrio sinaloensis DSM 21326]
 gi|323315002|gb|EGA68054.1| tRNA-specific adenosine-34 deaminase [Vibrio sinaloensis DSM 21326]
          Length = 179

 Score =  102 bits (253), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 53/147 (36%), Positives = 81/147 (55%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
           +  +FM  A++ A+ A    E+PVGAV V + +II+   N++    D TAHAEI  +R  
Sbjct: 9   QDELFMRRAMDLAKQAEAEGEVPVGAVLVKDGEIIAEGWNQSIGQNDATAHAEIQTLRKA 68

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
            ++L    L +  LYVTLEPC MCA A+  +R++R+ +GA + K G        +     
Sbjct: 69  GQVLENYRLLDTTLYVTLEPCPMCAGALLHSRVKRIVFGAPDLKAGAAGTVLNLFEHQAA 128

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H  ++  G+ E   R  +Q FFK RR
Sbjct: 129 YHYADVERGLLETECRTQLQAFFKRRR 155


>gi|283786173|ref|YP_003366038.1| tRNA-specific adenosine deaminase [Citrobacter rodentium ICC168]
 gi|282949627|emb|CBG89246.1| tRNA-specific adenosine deaminase [Citrobacter rodentium ICC168]
          Length = 180

 Score =  102 bits (253), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 57/143 (39%), Positives = 77/143 (53%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  AL  A+ A    E+PVGAV V NN++I    NR     D TAHAEI+A+R G  +L
Sbjct: 24  WMRHALTLAKRAWDEREVPVGAVLVHNNRVIGEGWNRPIGRHDPTAHAEIMALRQGGLVL 83

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  LYVTLEPC MCA A+  +RI R+ +GA + K G   +          +H  
Sbjct: 84  QNYRLIDATLYVTLEPCVMCAGAMVHSRISRVVFGARDAKTGAAGSLIDVLHHPGMNHRV 143

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           EI  G+       ++ DFF+ RR
Sbjct: 144 EITEGVLRDECATLLSDFFRMRR 166


>gi|22536583|ref|NP_687434.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus
           agalactiae 2603V/R]
 gi|25010509|ref|NP_734904.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus
           agalactiae NEM316]
 gi|76788440|ref|YP_329120.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus
           agalactiae A909]
 gi|77408782|ref|ZP_00785512.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus
           agalactiae COH1]
 gi|77412323|ref|ZP_00788636.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus
           agalactiae CJB111]
 gi|77413967|ref|ZP_00790141.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus
           agalactiae 515]
 gi|22533418|gb|AAM99306.1|AE014209_19 cytidine/deoxycytidylate deaminase family protein [Streptococcus
           agalactiae 2603V/R]
 gi|23094862|emb|CAD46080.1| Unknown [Streptococcus agalactiae NEM316]
 gi|76563497|gb|ABA46081.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus
           agalactiae A909]
 gi|77160003|gb|EAO71140.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus
           agalactiae 515]
 gi|77161612|gb|EAO72610.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus
           agalactiae CJB111]
 gi|77172627|gb|EAO75766.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus
           agalactiae COH1]
 gi|319744400|gb|EFV96759.1| cytidine/deoxycytidylate deaminase [Streptococcus agalactiae ATCC
           13813]
          Length = 168

 Score =  102 bits (253), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 55/143 (38%), Positives = 80/143 (55%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM+ AL+EA+++  + EIP+G V V +  II R  N   E      HAEI+AI      +
Sbjct: 12  FMTEALKEAKSSLEKEEIPIGCVIVKDGHIIGRGHNAREEFNKAILHAEIMAINNANEKV 71

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  L+VT+EPC MC+ AI LARI  + YGA N K G   +     + +  +H  
Sbjct: 72  GNWRLLDTTLFVTVEPCVMCSGAIGLARIPHVIYGAKNTKFGAAGSLYDILSDSRLNHRV 131

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+  GI E +  +I+QDFF++ R
Sbjct: 132 EVETGILEDQCAKIMQDFFRKGR 154


>gi|326203924|ref|ZP_08193786.1| CMP/dCMP deaminase zinc-binding [Clostridium papyrosolvens DSM
           2782]
 gi|325986022|gb|EGD46856.1| CMP/dCMP deaminase zinc-binding [Clostridium papyrosolvens DSM
           2782]
          Length = 151

 Score =  102 bits (253), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 52/143 (36%), Positives = 82/143 (57%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  A+++A+ A  + E PVGA+ V + ++I+   N+  E +DVT+HAEI A++   + L
Sbjct: 8   FMQEAIKQAKEAYAKGESPVGAIVVKDGELIASGCNQKEEKQDVTSHAEIEALKKAAKKL 67

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L   D+YVTLEPC MCA AI  +RI+ LY GA + K G   +    + +   +H  
Sbjct: 68  GTWRLDGCDMYVTLEPCAMCAGAIIQSRIKTLYIGAMDKKAGAAGSVIDLFRVPQFNHRV 127

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           ++  G+  +    I+ +FFK  R
Sbjct: 128 DVVYGLMFEECGNILTEFFKRLR 150


>gi|325264602|ref|ZP_08131332.1| cytidine/deoxycytidylate deaminase family protein [Clostridium sp.
           D5]
 gi|324030264|gb|EGB91549.1| cytidine/deoxycytidylate deaminase family protein [Clostridium sp.
           D5]
          Length = 159

 Score =  102 bits (253), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 56/149 (37%), Positives = 80/149 (53%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M     +M  A+ +A+ A    E+P+G V V  +KII R  NR    K+  AHAE+ AIR
Sbjct: 1   MNADEKYMKEAIRQAKKAYALEEVPIGCVIVYQDKIIGRGYNRRTIDKNPLAHAELTAIR 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              + L+   L E  LYVTLEPC MC+ AI  AR++R+  G  NPK G   +      + 
Sbjct: 61  RASKKLNDWRLEECTLYVTLEPCQMCSGAIIQARVQRVVVGCMNPKAGCAGSILNLLEMK 120

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  E+  G+ E+    +++ FFKE R
Sbjct: 121 EFNHQAELTTGVLEKECSTMMKQFFKELR 149


>gi|255534103|ref|YP_003094475.1| zinc-binding CMP/dCMP deaminase [Pedobacter heparinus DSM 2366]
 gi|255347087|gb|ACU06413.1| CMP/dCMP deaminase zinc-binding [Pedobacter heparinus DSM 2366]
          Length = 157

 Score =  102 bits (253), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 55/143 (38%), Positives = 73/143 (51%), Gaps = 5/143 (3%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  AL+EAQ A    EIP+GA+ V   KI+ R  N   +L DVTAHAE+ A     + L
Sbjct: 19  FMRLALQEAQKAYDLKEIPIGAIVVCKGKIVGRGHNLTEQLNDVTAHAEMQAFTAASQTL 78

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
             + L +  LYVT+EPC MCA A    +I +L YGA  PK G      Q       H   
Sbjct: 79  GGKYLKDCTLYVTIEPCVMCAGASYWTQIGKLVYGAPEPKRGFTTKSNQLL-----HPKT 133

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
            +  G+  Q    ++  FF ++R
Sbjct: 134 VLKSGVLAQECGALMTKFFADKR 156


>gi|238796745|ref|ZP_04640251.1| tRNA-specific adenosine deaminase [Yersinia mollaretii ATCC 43969]
 gi|238719476|gb|EEQ11286.1| tRNA-specific adenosine deaminase [Yersinia mollaretii ATCC 43969]
          Length = 181

 Score =  102 bits (253), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 58/143 (40%), Positives = 78/143 (54%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  A+  A  A    E+PVGAV VL+N++I    NR+    D TAHAEI+A+R G + +
Sbjct: 22  WMQRAMTLALRAQEEGEVPVGAVLVLDNQVIGEGWNRSIRDNDPTAHAEIMALRQGGQAV 81

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L E  LYVTLEPC MCA A+  +RIRRL YGA++ K G   +          +H  
Sbjct: 82  QNYRLLEATLYVTLEPCVMCAGAMVHSRIRRLVYGANDLKTGAAGSLVDILRHPGMNHQV 141

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           EI  G+        +  FF+ RR
Sbjct: 142 EISAGVLADACSHQLSAFFRLRR 164


>gi|326571142|gb|EGE21166.1| tRNA-specific adenosine deaminase [Moraxella catarrhalis BC7]
          Length = 159

 Score =  102 bits (253), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 58/143 (40%), Positives = 81/143 (56%), Gaps = 1/143 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M+ ALE A+  A   EIPVGAV V   +I+    N     +D TAHAEI+A+R  C  L+
Sbjct: 7   MNRALEIAKQGAKFGEIPVGAVVVYEGRILGEGYNCPITTQDPTAHAEIVAVRRACETLN 66

Query: 68  QEILPE-VDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
              LP+   LYVTLEPCTMC  A+  ARI R+ +GA  PK G + +  +       +H  
Sbjct: 67  NYRLPKGCILYVTLEPCTMCFGALIHARISRVVFGAFEPKAGVVVSQLKLPEQVFYNHHL 126

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
            +Y G+   +S  ++  FF++RR
Sbjct: 127 SVYGGLLADKSSALLSGFFRQRR 149


>gi|257416518|ref|ZP_05593512.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis AR01/DG]
 gi|257158346|gb|EEU88306.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis ARO1/DG]
          Length = 173

 Score =  102 bits (253), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 55/143 (38%), Positives = 79/143 (55%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  A+ EA+ A    E+P+GAV V   +II R  N     ++ T+HAE+ AI+  CR +
Sbjct: 16  FMREAIAEAKKAEGLAEVPIGAVIVRQGEIIGRGHNLREARQEATSHAEMYAIQEACRGI 75

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L E  L+VTLEPC MC+ A+ LARI  +YYGA++PK G              +H  
Sbjct: 76  ENWRLEETQLFVTLEPCPMCSGAMLLARIPEVYYGATDPKAGTAGTLMNLLEDERFNHVA 135

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
            +  G+ E+  R ++  FFK+ R
Sbjct: 136 YVEAGVLEEECRLLLVQFFKKLR 158


>gi|255975330|ref|ZP_05425916.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis T2]
 gi|307281893|ref|ZP_07562108.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Enterococcus faecalis TX0860]
 gi|255968202|gb|EET98824.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis T2]
 gi|306503847|gb|EFM73069.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Enterococcus faecalis TX0860]
          Length = 173

 Score =  102 bits (253), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 55/143 (38%), Positives = 79/143 (55%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  A+ EA+ A    E+P+G+V V   +II R  N     ++ TAHAE+ AI+  CR +
Sbjct: 16  FMREAIAEAKKAEGLAEVPIGSVIVRQGEIIGRGHNLREARQEATAHAEMYAIQEACRGI 75

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L E  L+VTLEPC MC+ A+ LARI  +YYGA++PK G              +H  
Sbjct: 76  ENWRLEETQLFVTLEPCPMCSGAMLLARIPEVYYGATDPKAGTAGTLMNLLEDERFNHVA 135

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
            +  G+ E+  R ++  FFK+ R
Sbjct: 136 YVEAGVLEEECRLLLVQFFKKLR 158


>gi|270291666|ref|ZP_06197882.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus
           sp. M143]
 gi|270279751|gb|EFA25592.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus
           sp. M143]
          Length = 155

 Score =  102 bits (253), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 59/149 (39%), Positives = 79/149 (53%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +++   FM  AL EA+ A   +EIP+G V V N +II R  N   EL+    HAEI+AI 
Sbjct: 5   VEEKEAFMREALREAEIALEHDEIPIGCVIVKNGEIIGRGHNAREELQRAVMHAEIMAIE 64

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
                     L +  L+VT+EPC MC+ AI LARI  + YGA N K G   +     T  
Sbjct: 65  NANASEESWRLLDCTLFVTIEPCVMCSGAIGLARIPNVVYGAKNQKFGAAGSLYDILTDE 124

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  E+  G+ E     I+QDFF+ RR
Sbjct: 125 RLNHRVEVETGVLESECAAIMQDFFRNRR 153


>gi|237756081|ref|ZP_04584658.1| tRNA-specific adenosine deaminase [Sulfurihydrogenibium
           yellowstonense SS-5]
 gi|237691753|gb|EEP60784.1| tRNA-specific adenosine deaminase [Sulfurihydrogenibium
           yellowstonense SS-5]
          Length = 149

 Score =  102 bits (253), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 53/143 (37%), Positives = 84/143 (58%), Gaps = 1/143 (0%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           F+  A++EA+ A  +NE+PVGA+ V + KIIS+A N+     +   HAEILAI   C+ L
Sbjct: 7   FIDQAVKEAEKALKKNEVPVGAIIVKDGKIISKAHNQRISKNNALYHAEILAIEKACKKL 66

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  LY TLEPC MC  A+  ARI+++ + A + KGG + +    +       + 
Sbjct: 67  KTWRLDDAVLYTTLEPCLMCTGAVMQARIKKVVFCAKDEKGGAVLSKYTVFDDKKLPFNV 126

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E Y  I ++R  +++++FFK+ R
Sbjct: 127 E-YEYIPDERCSKLLKEFFKKLR 148


>gi|238793763|ref|ZP_04637384.1| tRNA-specific adenosine deaminase [Yersinia intermedia ATCC 29909]
 gi|238726827|gb|EEQ18360.1| tRNA-specific adenosine deaminase [Yersinia intermedia ATCC 29909]
          Length = 181

 Score =  102 bits (253), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 57/143 (39%), Positives = 79/143 (55%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  AL  A  A    E+PVGAV VL N++I    N++    D TAHAEI+A+R G +++
Sbjct: 22  WMQRALTLALRAQNEGEVPVGAVLVLGNQVIGEGWNKSIRDNDPTAHAEIMALRQGGQVV 81

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L E  LYVTLEPC MCA A+  +RIRRL YGA++ K G   +          +H  
Sbjct: 82  QNYRLLEATLYVTLEPCVMCAGAMIHSRIRRLVYGANDLKTGAAGSLVDILHHPGMNHQI 141

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+  G+  +     +  FF+ RR
Sbjct: 142 EVSAGVLAETCSHQLSAFFRLRR 164


>gi|229588606|ref|YP_002870725.1| putative deaminase [Pseudomonas fluorescens SBW25]
 gi|229360472|emb|CAY47329.1| putative deaminase [Pseudomonas fluorescens SBW25]
          Length = 166

 Score =  102 bits (253), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 58/143 (40%), Positives = 79/143 (55%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  AL  A   A   E+PVGAV V + +II R  N      D +AHAE++AIR   + +
Sbjct: 19  FMREALVLAAQGAALGEVPVGAVLVQDGEIIGRGFNCPISGNDPSAHAEMVAIRAAAQAI 78

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
           S   L    LYVTLEPC+MCA  I  +RI R+ YGA  PK G +++  QF+T    +H  
Sbjct: 79  SNYRLVGSTLYVTLEPCSMCAGLIVHSRIARVVYGALEPKAGIVQSQGQFFTQGFLNHRV 138

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
               G+  Q    ++ +FF+ RR
Sbjct: 139 VFEGGVLAQECGTVLSEFFRARR 161


>gi|237653174|ref|YP_002889488.1| CMP/dCMP deaminase zinc-binding [Thauera sp. MZ1T]
 gi|237624421|gb|ACR01111.1| CMP/dCMP deaminase zinc-binding [Thauera sp. MZ1T]
          Length = 154

 Score =  102 bits (253), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 56/143 (39%), Positives = 78/143 (54%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  ALE+A+ A   +E+PVGAV V   +I+ R  N+     D TAHAEI+A+R     L
Sbjct: 6   YMRAALEQARAAGAADEVPVGAVVVCGGEIVGRGFNQPIGRHDPTAHAEIMALRDAAAHL 65

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               LP  +LYVTLEPC MC+ AI  ARI R+ +GA +PK G   +    +     +H  
Sbjct: 66  GNYRLPGCELYVTLEPCAMCSGAIMHARIARVVFGARDPKTGVAGSVLDLFAEPRLNHHA 125

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
            I  G+      +++  FF  RR
Sbjct: 126 TIEGGLLADECGRMLSSFFAARR 148


>gi|296113086|ref|YP_003627024.1| tRNA-specific adenosine deaminase [Moraxella catarrhalis RH4]
 gi|295920780|gb|ADG61131.1| tRNA-specific adenosine deaminase [Moraxella catarrhalis RH4]
          Length = 159

 Score =  102 bits (253), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 58/143 (40%), Positives = 81/143 (56%), Gaps = 1/143 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M+ ALE A+  A   EIPVGAV V   +I+    N     +D TAHAEI+A+R  C  L+
Sbjct: 7   MNRALEIAKQGAKFGEIPVGAVVVYEGRILGEGYNCPITTQDPTAHAEIVAVRRACETLN 66

Query: 68  QEILPE-VDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
              LP+   LYVTLEPCTMC  A+  ARI R+ +GA  PK G + +  +       +H  
Sbjct: 67  NYRLPKGCILYVTLEPCTMCFGALIHARISRVVFGAFEPKAGVVVSQLKLPEQVFYNHHL 126

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
            +Y G+   +S  ++  FF++RR
Sbjct: 127 SVYGGLLADKSSALLSGFFRQRR 149


>gi|254509189|ref|ZP_05121287.1| tRNA-specific adenosine deaminase [Vibrio parahaemolyticus 16]
 gi|219547894|gb|EED24921.1| tRNA-specific adenosine deaminase [Vibrio parahaemolyticus 16]
          Length = 187

 Score =  102 bits (253), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 53/143 (37%), Positives = 80/143 (55%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  A+E A +A    E+PVGAV V + +II+   N++    D TAHAE+  IR   ++L
Sbjct: 20  YMRRAMELAAHAETEGEVPVGAVLVKDGEIIAEGWNQSIGCHDATAHAEMQTIRKAGQVL 79

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  LYVTLEPC MCA A+  +R++R+ +GA + K G        +     +H  
Sbjct: 80  ENYRLLDTTLYVTLEPCPMCAGALLHSRVKRVVFGAPDLKAGAAGTVLNLFEHQAAYHYA 139

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           ++  G+ E+  R  +Q FFK RR
Sbjct: 140 DVEQGLLEEECRVQLQSFFKRRR 162


>gi|302037080|ref|YP_003797402.1| tRNA-specific adenosine deaminase [Candidatus Nitrospira defluvii]
 gi|300605144|emb|CBK41477.1| tRNA-specific adenosine deaminase [Candidatus Nitrospira defluvii]
          Length = 162

 Score =  102 bits (253), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 55/143 (38%), Positives = 81/143 (56%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  AL  A++A L  E+P+ A+ V    +I++A N     +D TAHAE++ I+   R +
Sbjct: 11  FMQQALTLARSAPLIGEVPIAALLVHEGIVIAQAHNLRETRQDPTAHAEVIVIQDAARHM 70

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L    LYVTLEPCTMC  AI LARI RL + A++PK G   +          +H  
Sbjct: 71  GSWRLINTTLYVTLEPCTMCIGAIVLARIPRLVFAATDPKAGACGSIMNIPPEPRLNHRV 130

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+  G+  + S+ ++QDFF++ R
Sbjct: 131 EVVGGVCAEESQALLQDFFQQLR 153


>gi|71907824|ref|YP_285411.1| tRNA-adenosine deaminase [Dechloromonas aromatica RCB]
 gi|71847445|gb|AAZ46941.1| tRNA-adenosine deaminase [Dechloromonas aromatica RCB]
          Length = 146

 Score =  102 bits (253), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 55/139 (39%), Positives = 76/139 (54%)

Query: 11  ALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEI 70
           A+  A+ A    E+PVGAV VLN +I+ R  N      D TAHAEI A+R   R+L    
Sbjct: 4   AISLARAAECLGEVPVGAVVVLNGEIVGRGFNSPIGESDPTAHAEIAALRDAARVLGNYR 63

Query: 71  LPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYP 130
           LP  +L+VTLEPC MCA AI  +RI R+ YGA +PK G   +    + +   +H   +  
Sbjct: 64  LPGCELFVTLEPCAMCAGAIMHSRISRVIYGARDPKTGVHGSVVDLFGVERLNHHATVEG 123

Query: 131 GISEQRSRQIIQDFFKERR 149
           G+  +    ++  FF  RR
Sbjct: 124 GVLAEECSTLLSGFFASRR 142


>gi|325662866|ref|ZP_08151435.1| hypothetical protein HMPREF0490_02175 [Lachnospiraceae bacterium
           4_1_37FAA]
 gi|325470918|gb|EGC74147.1| hypothetical protein HMPREF0490_02175 [Lachnospiraceae bacterium
           4_1_37FAA]
          Length = 163

 Score =  102 bits (253), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 52/149 (34%), Positives = 83/149 (55%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M +   +M  A+ +A+ A    E+P+G V V  +KII+R  NR    K+  AHAE++AIR
Sbjct: 1   MNQDEKYMKEAIRQAKKAYALKEVPIGCVIVYQDKIIARGYNRRTIDKNTLAHAELIAIR 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              R +    L +  +YVTLEPC MC+ AI  +R++++  G  NPK G   +      + 
Sbjct: 61  KASRKMDDWRLEDCTMYVTLEPCQMCSGAIVQSRMKKVVVGCMNPKAGCAGSIFNLLQVP 120

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  E+  G+ E+   Q+++ FF+E R
Sbjct: 121 QFNHQVELEIGVLEEECSQLMKSFFRELR 149


>gi|288934060|ref|YP_003438119.1| CMP/dCMP deaminase zinc-binding protein [Klebsiella variicola
           At-22]
 gi|288888789|gb|ADC57107.1| CMP/dCMP deaminase zinc-binding protein [Klebsiella variicola
           At-22]
          Length = 169

 Score =  101 bits (252), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 57/143 (39%), Positives = 77/143 (53%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  AL  A+ A    E+PVGAV V NN++I    NR     D TAHAEI+A+R G  + 
Sbjct: 11  WMRHALTLAKRAWEEGEVPVGAVLVYNNQVIGEGWNRPIGRHDPTAHAEIMALRQGGLVQ 70

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  LYVTLEPC MCA A+  +RI RL +GA + K G   +          +H  
Sbjct: 71  QNYRLIDATLYVTLEPCVMCAGAMVHSRIARLVFGARDAKTGAAGSLIDVLHHPGMNHRV 130

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           EI  G+  +    ++ DFF+ RR
Sbjct: 131 EISEGVLAESCSTMLSDFFRWRR 153


>gi|51245291|ref|YP_065175.1| hypothetical protein DP1439 [Desulfotalea psychrophila LSv54]
 gi|50876328|emb|CAG36168.1| conserved hypothetical protein [Desulfotalea psychrophila LSv54]
          Length = 166

 Score =  101 bits (252), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 55/144 (38%), Positives = 81/144 (56%)

Query: 6   VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           ++M  AL+EA  A    E+PVGAV V + ++I+   N      D +AHAEI+A+R   ++
Sbjct: 12  LWMGYALDEAARAGANGEVPVGAVLVQDGELIATGLNGMITHNDPSAHAEIVALRQAGQV 71

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           L+    PE  LYVTLEPC MC  AI  ARI+RL + A + K G   +          +H 
Sbjct: 72  LNNYRFPEATLYVTLEPCIMCMGAIIQARIKRLVFAAFDTKTGAAGSLYDIGRDGALNHR 131

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
            EI  G+  + S  +++ FF++RR
Sbjct: 132 VEIMGGVLAETSAALLKAFFRDRR 155


>gi|300214872|gb|ADJ79288.1| Cytosine/adenosine deaminase [Lactobacillus salivarius CECT 5713]
          Length = 166

 Score =  101 bits (252), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 57/143 (39%), Positives = 78/143 (54%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  AL EA+ AA   E+P+G V V + KII R  N     ++ T HAE+LAI      +
Sbjct: 11  FMKEALFEAKLAAKIGEVPIGCVIVKDGKIIGRGHNLREHSQNATLHAEMLAIEEANETV 70

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
           +   L +  L+VTLEPC MC+ AI  +RI  +YYGAS+PK G +         +  +H  
Sbjct: 71  NSWRLVDTQLFVTLEPCPMCSGAIINSRIPEVYYGASDPKAGTVGTLMNLLEDSRFNHQS 130

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
            +  GI E     I++DFFK  R
Sbjct: 131 FVEKGILENECASILKDFFKSIR 153


>gi|293390603|ref|ZP_06634937.1| tRNA-specific adenosine deaminase [Aggregatibacter
           actinomycetemcomitans D7S-1]
 gi|290951137|gb|EFE01256.1| tRNA-specific adenosine deaminase [Aggregatibacter
           actinomycetemcomitans D7S-1]
          Length = 175

 Score =  101 bits (252), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 61/144 (42%), Positives = 82/144 (56%), Gaps = 1/144 (0%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           FM  AL  A  A    EIPVGAV V    +II    N +    D TAHAEI+A+R G + 
Sbjct: 12  FMRHALMLAGKAEALGEIPVGAVLVSEAGEIIGEGWNLSIIHSDPTAHAEIVALRQGGQK 71

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           L    L  + LYVTLEPCTMCA AI  +RI+RL +GA++ K G + +   F+     +H 
Sbjct: 72  LQNYRLLNITLYVTLEPCTMCAGAILHSRIKRLVFGAADYKTGAVGSRFHFFDDYKMNHV 131

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
            EI  G+ +Q   + +  FF++RR
Sbjct: 132 IEITGGVLQQECSEKLSAFFQKRR 155


>gi|17232364|ref|NP_488912.1| hypothetical protein all4872 [Nostoc sp. PCC 7120]
 gi|17134009|dbj|BAB76571.1| all4872 [Nostoc sp. PCC 7120]
          Length = 147

 Score =  101 bits (252), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 61/143 (42%), Positives = 79/143 (55%), Gaps = 1/143 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           MS ALE A+ A    EIPVGAV    +  +I+   NR    +D TAHAEI+A+R   +IL
Sbjct: 1   MSHALELAKVAGEAGEIPVGAVITDASGHLIAEGENRKERDQDPTAHAEIVALRAATKIL 60

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L E  LYVTLEPC MCA AI  +R+ +L YG  + K G I         A  +H  
Sbjct: 61  QTWRLHECTLYVTLEPCPMCAGAIIHSRLGKLVYGVDDTKTGAIRTVLNIPDSAASNHRL 120

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           ++  GI E   RQ +Q++F  RR
Sbjct: 121 QVIGGILESACRQHLQNWFVNRR 143


>gi|157144506|ref|YP_001451825.1| tRNA-specific adenosine deaminase [Citrobacter koseri ATCC BAA-895]
 gi|157081711|gb|ABV11389.1| hypothetical protein CKO_00224 [Citrobacter koseri ATCC BAA-895]
          Length = 180

 Score =  101 bits (252), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 57/143 (39%), Positives = 77/143 (53%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  AL  A+ A    E+PVGAV V NN++I    NR     D TAHAEI+A+R G  +L
Sbjct: 24  WMRHALTLAKRAWDEREVPVGAVLVHNNRVIGEGWNRPIGHHDPTAHAEIMALRQGGLVL 83

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  LYVTLEPC MCA A+  +RI R+ +GA + K G   +          +H  
Sbjct: 84  QNYRLLDTTLYVTLEPCVMCAGAMVHSRIGRVVFGARDAKTGAAGSLMDVLHHPGMNHRV 143

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           EI  G+       ++ DFF+ RR
Sbjct: 144 EITEGVLRDECAALLSDFFRMRR 166


>gi|172036189|ref|YP_001802690.1| putative cytidine/deoxycytidylate deaminase [Cyanothece sp. ATCC
           51142]
 gi|171697643|gb|ACB50624.1| putative cytidine/deoxycytidylate deaminase [Cyanothece sp. ATCC
           51142]
          Length = 184

 Score =  101 bits (252), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 58/144 (40%), Positives = 77/144 (53%), Gaps = 1/144 (0%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           +M  AL+ A  AA   ++PVGAV + + N II+   N   +  D T HAEI+AI     I
Sbjct: 38  WMRQALQLANKAAELGDVPVGAVIINHQNNIIAEGYNSKEQNHDPTGHAEIMAIHRASEI 97

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           L    L E  LYVTLEPC MCA AI  +R+  L YG  +PK G I         A  +H 
Sbjct: 98  LQSWHLEECTLYVTLEPCIMCAGAIIQSRLGLLVYGLDDPKSGSIRTVLNLPDSAASNHR 157

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
             +  GI E   RQ ++D+F ++R
Sbjct: 158 LSVLSGILEDECRQQLRDWFTDKR 181


>gi|319953292|ref|YP_004164559.1| cmp/dcmp deaminase zinc-binding protein [Cellulophaga algicola DSM
           14237]
 gi|319421952|gb|ADV49061.1| CMP/dCMP deaminase zinc-binding protein [Cellulophaga algicola DSM
           14237]
          Length = 149

 Score =  101 bits (252), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 54/143 (37%), Positives = 82/143 (57%), Gaps = 6/143 (4%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  AL+EA  A  + E+PVGA+ V+ ++II+RA N   +L DVTAHAE+ AI      L
Sbjct: 10  YMKKALQEAAMAFEKGEVPVGAIIVIQDRIIARAHNLTEQLNDVTAHAEMQAITAAANFL 69

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
             + L +  LYVTLEPC MCA A+  ++I ++ Y A + + G    GT      T H   
Sbjct: 70  GGKYLKDCTLYVTLEPCQMCAGALYWSQISKIVYAAKDVERGCGAMGT------TLHPKT 123

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           +I  G+    +  +++ FF ++R
Sbjct: 124 KIVGGVLAAEASAMLKRFFSQKR 146


>gi|329119731|ref|ZP_08248411.1| tRNA-specific adenosine deaminase [Neisseria bacilliformis ATCC
           BAA-1200]
 gi|327464180|gb|EGF10485.1| tRNA-specific adenosine deaminase [Neisseria bacilliformis ATCC
           BAA-1200]
          Length = 151

 Score =  101 bits (252), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 54/143 (37%), Positives = 82/143 (57%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
            M+ AL++A+ AA  NE+PVGA+ V + +I++ A N       V AHAEILA+    + L
Sbjct: 9   LMAAALDKARQAAAENEVPVGALIVRDGQILAAAHNACAAQNSVAAHAEILALTAAGQSL 68

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L   D Y+TLEPC MCA+A+  ARI+R+ + A+ PK G   +    +     +   
Sbjct: 69  GTPRLDSCDAYITLEPCPMCASALMQARIKRVIFAAAEPKSGAAGSVCNLFADTRLNAHT 128

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
            ++ GI  + SR ++Q FF+ RR
Sbjct: 129 AVFGGIMAEESRTLLQAFFRSRR 151


>gi|170019158|ref|YP_001724112.1| tRNA-specific adenosine deaminase [Escherichia coli ATCC 8739]
 gi|169754086|gb|ACA76785.1| CMP/dCMP deaminase zinc-binding [Escherichia coli ATCC 8739]
          Length = 167

 Score =  101 bits (252), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 57/143 (39%), Positives = 78/143 (54%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  AL  A+ A    E+PVGAV V NN++I    NR     D TAHAEI+A+R G  ++
Sbjct: 11  WMRHALTLAKRAWDEREVPVGAVLVHNNRVIGEGWNRPIGRHDPTAHAEIMALRQGGLVM 70

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  LYVTLEPC MCA A+  +RI R+ +GA + K G   +       +  +H  
Sbjct: 71  QNYRLIDATLYVTLEPCVMCAGAMIHSRIGRVVFGARDAKTGAAGSLMDVLHHSGMNHRV 130

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           EI  GI       ++ DFF+ RR
Sbjct: 131 EITEGILADECAALLSDFFRMRR 153


>gi|329943103|ref|ZP_08291877.1| cytidine and deoxycytidylate deaminase zinc-binding region family
           protein [Chlamydophila psittaci Cal10]
 gi|332287685|ref|YP_004422586.1| cytidine/deoxycytidylate deaminase family protein [Chlamydophila
           psittaci 6BC]
 gi|325506881|gb|ADZ18519.1| cytidine/deoxycytidylate deaminase family protein [Chlamydophila
           psittaci 6BC]
 gi|328814650|gb|EGF84640.1| cytidine and deoxycytidylate deaminase zinc-binding region family
           protein [Chlamydophila psittaci Cal10]
          Length = 148

 Score =  101 bits (252), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 57/142 (40%), Positives = 80/142 (56%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M+ AL+EA+ A   +E+PVG V V +NKII+R  N   +L+D TAHAEIL I    + L 
Sbjct: 1   MNQALKEARQAYDEDEVPVGCVIVKDNKIIARGHNTTEKLQDPTAHAEILCIGAAAQYLE 60

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
              L +  LY TLEPC MCA AI  ARIRR+ + A + + G   +    +      H  E
Sbjct: 61  NWRLVDTVLYCTLEPCLMCAGAIQQARIRRIVWAAPDLRLGAGGSWINVFKEKHPFHQVE 120

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
              GI  + + Q+++ FF  +R
Sbjct: 121 CCSGICREDAEQLMKQFFIGKR 142


>gi|238897621|ref|YP_002923300.1| CMP/dCMP deaminase; zinc-binding [Candidatus Hamiltonella defensa
           5AT (Acyrthosiphon pisum)]
 gi|229465378|gb|ACQ67152.1| CMP/dCMP deaminase; zinc-binding [Candidatus Hamiltonella defensa
           5AT (Acyrthosiphon pisum)]
          Length = 168

 Score =  101 bits (252), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 57/143 (39%), Positives = 79/143 (55%), Gaps = 2/143 (1%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  AL  A+ A    E+P+GAV V+NN+ I    N++    D TAHAEI+A+R   R  
Sbjct: 18  WMRHALSLAEQAQASGEVPIGAVVVVNNQSIGEGWNQSVMCHDPTAHAEIIALRQAGRHQ 77

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L    LYVTLEPC MC  AI  +RIR L YGA +PK GG+   T+   +       
Sbjct: 78  KNYRLVNATLYVTLEPCMMCVGAIMHSRIRGLVYGAPDPKKGGVAFLTRMMNIQV--KRI 135

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           +I   +  Q   +++ DFF++RR
Sbjct: 136 DIKTDVLSQTCSRMLVDFFQQRR 158


>gi|319790641|ref|YP_004152274.1| CMP/dCMP deaminase zinc-binding protein [Thermovibrio ammonificans
           HB-1]
 gi|317115143|gb|ADU97633.1| CMP/dCMP deaminase zinc-binding protein [Thermovibrio ammonificans
           HB-1]
          Length = 148

 Score =  101 bits (252), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 51/122 (41%), Positives = 75/122 (61%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           F+  AL EA+ A    E+P+GAV V N ++I++A NR   L+D TAHAE++AIR   R L
Sbjct: 6   FLRLALREAEKALSFGEVPIGAVVVRNGEVIAKAFNRKEFLQDPTAHAELIAIREAARKL 65

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
           +   L +  +Y T+EPC MC  AI  +RI+R+ Y   +PK GG+E+  +       +H P
Sbjct: 66  NSWRLNDCTIYSTVEPCIMCCGAIIQSRIKRVVYSTPDPKFGGVESLYRLLGDERNNHRP 125

Query: 127 EI 128
           E+
Sbjct: 126 EV 127


>gi|22297721|ref|NP_680968.1| putative cytidine or deoxycytidylate [Thermosynechococcus elongatus
           BP-1]
 gi|22293898|dbj|BAC07730.1| tlr0177 [Thermosynechococcus elongatus BP-1]
          Length = 164

 Score =  101 bits (252), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 57/146 (39%), Positives = 81/146 (55%), Gaps = 1/146 (0%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
           + +M  A+  A+ A   +E+PVGAV V   N++I+   NR +   D TAHAEI+A+R   
Sbjct: 14  DFWMQQAIALAEQAGAADEVPVGAVIVSAENELIATGENRRQRDHDPTAHAEIIALRRAG 73

Query: 64  RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123
           + L    L    LYVTLEPC MCA AI  ARI  L YG ++PK G I++  Q        
Sbjct: 74  QRLGTWYLTGCRLYVTLEPCPMCAGAIVQARIHTLIYGTTDPKSGAIDSVLQLPQSPAVF 133

Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149
           H  ++  G+     RQ +Q +F++ R
Sbjct: 134 HRIQVIRGVQAVACRQQLQRWFRQHR 159


>gi|253988801|ref|YP_003040157.1| tRNA -specific adenosine deaminase [Photorhabdus asymbiotica subsp.
           asymbiotica ATCC 43949]
 gi|253780251|emb|CAQ83412.1| similar to ecoli yfhc protein, tRNA-specific adenosine deaminase
           [Photorhabdus asymbiotica]
          Length = 169

 Score =  101 bits (252), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 58/143 (40%), Positives = 81/143 (56%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  A+E A  A  + EIPVGAV V +N+II+   N++    D +AHAE++A+R G   L
Sbjct: 10  WMQQAMERAIKAWEQGEIPVGAVLVADNEIIAEGWNQSIIAHDPSAHAEVIALRKGGEQL 69

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L    LYVTLEPC MCA A+  +RI+RL YGAS+ K G   +          +H  
Sbjct: 70  QNYRLLNTTLYVTLEPCAMCAGAMIHSRIQRLVYGASDMKTGAAGSLIDILRHPGMNHQI 129

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           EI  G+  +    ++  FFK+RR
Sbjct: 130 EITGGVLAEACSTMLSVFFKQRR 152


>gi|149190045|ref|ZP_01868322.1| cytosine/adenosine deaminase [Vibrio shilonii AK1]
 gi|148836075|gb|EDL53035.1| cytosine/adenosine deaminase [Vibrio shilonii AK1]
          Length = 178

 Score =  101 bits (252), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 55/143 (38%), Positives = 78/143 (54%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  A+E A +A    E+PVGAV V   KII+   N++    D TAHAE+  IR   + L
Sbjct: 17  FMQRAMELANHAESEGEVPVGAVLVRGGKIIAEGWNQSIGNHDATAHAEMQVIRKAGQNL 76

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  LYVTLEPC MCA A+  +R++R+ +GA + K G        +     +H  
Sbjct: 77  ENYRLLDTTLYVTLEPCPMCAGALLHSRVKRVVFGAPDLKAGAAGTVLNLFESQASYHYA 136

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           ++  G+ E+  R  +Q FFK RR
Sbjct: 137 DVESGLLEEECRHQLQAFFKRRR 159


>gi|315633684|ref|ZP_07888974.1| tRNA-specific adenosine deaminase [Aggregatibacter segnis ATCC
           33393]
 gi|315477726|gb|EFU68468.1| tRNA-specific adenosine deaminase [Aggregatibacter segnis ATCC
           33393]
          Length = 175

 Score =  101 bits (252), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 61/144 (42%), Positives = 82/144 (56%), Gaps = 1/144 (0%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           FM  AL  A  A    EIPVGAV V    +II    N +    D TAHAEI+A+R G + 
Sbjct: 12  FMRHALMLADKAEALGEIPVGAVLVSEEGEIIGEGWNLSIIDSDPTAHAEIVALRQGGQR 71

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           L    L    LYVTLEPCTMCA AI  +RI+RL +GA++ K G + +   F+     +H+
Sbjct: 72  LQNYRLLNATLYVTLEPCTMCAGAILHSRIKRLVFGAADYKTGAVGSRFHFFDDYKMNHA 131

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
            EI  G+ +Q   + +  FF++RR
Sbjct: 132 IEITGGVLQQECSEKLSAFFQKRR 155


>gi|123441377|ref|YP_001005364.1| tRNA-specific adenosine deaminase [Yersinia enterocolitica subsp.
           enterocolitica 8081]
 gi|122088338|emb|CAL11129.1| putative zinc-binding protein [Yersinia enterocolitica subsp.
           enterocolitica 8081]
          Length = 161

 Score =  101 bits (252), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 57/142 (40%), Positives = 78/142 (54%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  AL  A  A +  E+PVGA+ VL+N++I    NR     D TAHAEI+A+R G +++ 
Sbjct: 1   MQRALALALRAQVEGEVPVGAILVLDNQVIGEGWNRPIRDNDPTAHAEIMALRQGGQVVQ 60

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
              L +  LYVTLEPC MCA A+  +RIRRL YGA++ K G   +          +H  E
Sbjct: 61  NYRLIDATLYVTLEPCVMCAGAMVHSRIRRLVYGANDLKTGAAGSLVDILRHPGMNHQIE 120

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
           I  G+        +  FF+ RR
Sbjct: 121 ITAGVMADACAHQLSAFFRLRR 142


>gi|146308436|ref|YP_001188901.1| CMP/dCMP deaminase, zinc-binding [Pseudomonas mendocina ymp]
 gi|145576637|gb|ABP86169.1| CMP/dCMP deaminase, zinc-binding protein [Pseudomonas mendocina
           ymp]
          Length = 158

 Score =  101 bits (252), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 56/143 (39%), Positives = 82/143 (57%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  AL +A+  A + E+PVGAV V + +++ +  N      D +AHAE++AIR   + +
Sbjct: 15  FMRLALVQARLGAEQGEVPVGAVLVQDGEVVGQGFNCPILRHDPSAHAEMVAIRAAAQSV 74

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               LP   LYVTLEPC+MCA  I  ARI R+ Y AS P+ G   +  QF+     +H  
Sbjct: 75  QNYRLPGSTLYVTLEPCSMCAGLIVHARIARVVYAASEPRAGVAISQGQFFDQGFLNHRV 134

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
            +  G+  + S  +++DFFK RR
Sbjct: 135 LVEGGLLAEESGALLKDFFKARR 157


>gi|332526241|ref|ZP_08402370.1| tRNA-adenosine deaminase [Rubrivivax benzoatilyticus JA2]
 gi|332110075|gb|EGJ10703.1| tRNA-adenosine deaminase [Rubrivivax benzoatilyticus JA2]
          Length = 188

 Score =  101 bits (252), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 55/142 (38%), Positives = 80/142 (56%), Gaps = 4/142 (2%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNN----KIISRAGNRNRELKDVTAHAEILAIRMGC 63
           M+ AL++AQNA L  E+PVGAV +       ++++   NR     D TAHAEI+A+R   
Sbjct: 15  MAIALDQAQNAWLVGEVPVGAVIMRPGPEGPQVLATGYNRPITTHDPTAHAEIVALRHAA 74

Query: 64  RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123
            +L    LPE +LYVTLEPC MCA A+  AR +R+ YGA +PK G   +    +     +
Sbjct: 75  TLLGNYRLPECELYVTLEPCAMCAMALMHARFKRIVYGAPDPKTGAAGSVVDLFADRRLN 134

Query: 124 HSPEIYPGISEQRSRQIIQDFF 145
           H  +I  G+       +++ FF
Sbjct: 135 HHTQIVGGVMAAECGDLLRRFF 156


>gi|37679027|ref|NP_933636.1| cytosine/adenosine deaminase [Vibrio vulnificus YJ016]
 gi|37197769|dbj|BAC93607.1| cytosine/adenosine deaminase [Vibrio vulnificus YJ016]
          Length = 181

 Score =  101 bits (252), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 55/147 (37%), Positives = 80/147 (54%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
           +  VFM  A+E A  A    E+PVGAV V + ++I+   N++    D TAHAEI  +R  
Sbjct: 11  QDEVFMRRAIELAAIAESEGEVPVGAVLVKDGEVIAEGWNQSIGQHDATAHAEIQTLRQA 70

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
            + L    L +  LYVTLEPC MCA A+  +R++R+ +GA + K G        ++    
Sbjct: 71  GQSLGNYRLLDTTLYVTLEPCPMCAGALLHSRVKRIVFGAPDLKAGAAGTVLDLFSSQAA 130

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H   I  G+ E   R+ +Q FFK RR
Sbjct: 131 YHYATIDKGLLESECREQLQAFFKRRR 157


>gi|309800211|ref|ZP_07694392.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus
           infantis SK1302]
 gi|308116152|gb|EFO53647.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus
           infantis SK1302]
          Length = 166

 Score =  101 bits (252), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 59/149 (39%), Positives = 82/149 (55%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +++  VFM  AL+EA+ A   +EIP+G V V + +II R  N   EL+    HAEI+AI 
Sbjct: 5   VEEKEVFMREALKEAEIALEHDEIPIGCVIVKDGEIIGRGHNAREELQRAVMHAEIMAIE 64

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
                     L +  L+VT+EPC MC+ AI LARI ++ YGA N K G   +     T  
Sbjct: 65  NANVREESWRLLDCTLFVTIEPCVMCSGAIGLARIPKVVYGAKNQKFGAAGSLYDILTDE 124

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  E+  GI E     I+Q+FF+ RR
Sbjct: 125 RLNHRVEVETGILESECAGIMQEFFRNRR 153


>gi|145641906|ref|ZP_01797480.1| preprotein translocase subunit SecA [Haemophilus influenzae R3021]
 gi|145273385|gb|EDK13257.1| preprotein translocase subunit SecA [Haemophilus influenzae
           22.4-21]
          Length = 147

 Score =  101 bits (252), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 60/143 (41%), Positives = 80/143 (55%), Gaps = 1/143 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNN-KIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  AL  A  A    EIPVGAV V ++  II    N +    D TAHAEI+A+R G + +
Sbjct: 1   MRYALTLADKAEALGEIPVGAVLVDDSGNIIGEGWNLSIVQNDPTAHAEIIALRNGAKNI 60

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L    LYVTLEPCTMCA AI  +RI+RL +G S+ K G I +   F+     +H+ 
Sbjct: 61  QNYRLLNTTLYVTLEPCTMCAGAILHSRIKRLVFGTSDYKTGAIGSRFHFFDDYKMNHTL 120

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           EI  G+  +   Q +  FF++RR
Sbjct: 121 EITSGVLAEECSQKLSTFFQKRR 143


>gi|259650544|dbj|BAI42706.1| putative cytosine/adenosine deaminase [Lactobacillus rhamnosus GG]
          Length = 170

 Score =  101 bits (252), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 57/130 (43%), Positives = 74/130 (56%), Gaps = 6/130 (4%)

Query: 23  EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEP 82
           E+P+GAV V + +II R  N     +D T HAEILAI+  CR L    L +  L+VTLEP
Sbjct: 27  EVPIGAVVVHDQQIIGRGYNLRETTQDATQHAEILAIQAACRQLGTWRLEDCSLFVTLEP 86

Query: 83  CTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL---ATCHHSPEIYPGISEQRSRQ 139
           C MCA  +  ARI   Y+GA++PK G    GT FY L      +H   + PGI    S  
Sbjct: 87  CPMCAGTMINARIATCYFGATDPKAG--VAGT-FYNLLEDTRFNHQVAVVPGIQAIASAA 143

Query: 140 IIQDFFKERR 149
           ++QDFF+  R
Sbjct: 144 LLQDFFRAIR 153


>gi|184157936|ref|YP_001846275.1| cytosine/adenosine deaminase [Acinetobacter baumannii ACICU]
 gi|332872773|ref|ZP_08440739.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Acinetobacter baumannii 6014059]
 gi|183209530|gb|ACC56928.1| Cytosine/adenosine deaminase [Acinetobacter baumannii ACICU]
 gi|322508255|gb|ADX03709.1| Putative deaminase [Acinetobacter baumannii 1656-2]
 gi|323517881|gb|ADX92262.1| cytosine/adenosine deaminase [Acinetobacter baumannii TCDC-AB0715]
 gi|332739070|gb|EGJ69931.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Acinetobacter baumannii 6014059]
          Length = 167

 Score =  101 bits (251), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 59/140 (42%), Positives = 75/140 (53%), Gaps = 1/140 (0%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  A E+A+ AA + EIPVGAV V  NK+I    N    L D TAHAEI AIR  C  L
Sbjct: 9   WMQLAYEQAELAAKQGEIPVGAVIVSQNKLIGAGFNAPIGLSDPTAHAEIQAIRAACESL 68

Query: 67  SQEILPE-VDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
               LPE   LYVTLEPCTMC  A+  ARI+ + +G + PK G + +  Q       +H 
Sbjct: 69  KNYRLPEDATLYVTLEPCTMCVGALVHARIKHVVFGTTEPKAGSLVSARQLLENGYYNHK 128

Query: 126 PEIYPGISEQRSRQIIQDFF 145
                G   ++  Q +  FF
Sbjct: 129 FTFEHGYLHEKCAQQLSLFF 148


>gi|45442315|ref|NP_993854.1| tRNA-specific adenosine deaminase [Yersinia pestis biovar Microtus
           str. 91001]
 gi|108808356|ref|YP_652272.1| tRNA-specific adenosine deaminase [Yersinia pestis Antiqua]
 gi|108811379|ref|YP_647146.1| tRNA-specific adenosine deaminase [Yersinia pestis Nepal516]
 gi|145599538|ref|YP_001163614.1| tRNA-specific adenosine deaminase [Yersinia pestis Pestoides F]
 gi|149365378|ref|ZP_01887413.1| tRNA-specific adenosine deaminase [Yersinia pestis CA88-4125]
 gi|229838506|ref|ZP_04458665.1| tRNA-specific adenosine-34 deaminase [Yersinia pestis biovar
           Orientalis str. PEXU2]
 gi|229895510|ref|ZP_04510681.1| tRNA-specific adenosine-34 deaminase [Yersinia pestis Pestoides A]
 gi|229899076|ref|ZP_04514220.1| tRNA-specific adenosine-34 deaminase [Yersinia pestis biovar
           Orientalis str. India 195]
 gi|229901629|ref|ZP_04516751.1| tRNA-specific adenosine-34 deaminase [Yersinia pestis Nepal516]
 gi|45437179|gb|AAS62731.1| putative zinc-binding protein [Yersinia pestis biovar Microtus str.
           91001]
 gi|108775027|gb|ABG17546.1| tRNA-adenosine deaminase [Yersinia pestis Nepal516]
 gi|108780269|gb|ABG14327.1| tRNA-adenosine deaminase [Yersinia pestis Antiqua]
 gi|145211234|gb|ABP40641.1| tRNA-adenosine deaminase [Yersinia pestis Pestoides F]
 gi|149291791|gb|EDM41865.1| tRNA-specific adenosine deaminase [Yersinia pestis CA88-4125]
 gi|229681558|gb|EEO77652.1| tRNA-specific adenosine-34 deaminase [Yersinia pestis Nepal516]
 gi|229688021|gb|EEO80093.1| tRNA-specific adenosine-34 deaminase [Yersinia pestis biovar
           Orientalis str. India 195]
 gi|229694872|gb|EEO84919.1| tRNA-specific adenosine-34 deaminase [Yersinia pestis biovar
           Orientalis str. PEXU2]
 gi|229701316|gb|EEO89344.1| tRNA-specific adenosine-34 deaminase [Yersinia pestis Pestoides A]
 gi|320016065|gb|ADV99636.1| tRNA-specific adenosine-34 deaminase [Yersinia pestis biovar
           Medievalis str. Harbin 35]
          Length = 187

 Score =  101 bits (251), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 59/143 (41%), Positives = 77/143 (53%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  AL  A  A    E+PVGAV VL NK+I    NR     D TAHAEI+A+R G + +
Sbjct: 28  WMRHALTLALRAQEEGEVPVGAVLVLGNKVIGEGWNRPIRDNDPTAHAEIMALRQGGQAV 87

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  LYVTLEPC MCA A+  +RIRRL YGA++ K G   +          +H  
Sbjct: 88  QNYRLLDATLYVTLEPCVMCAGAMVHSRIRRLVYGANDVKTGAAGSLVDILRHPGMNHQI 147

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+  GI        +  FF++RR
Sbjct: 148 EVSAGILAIACSHQLSAFFRQRR 170


>gi|238788214|ref|ZP_04632009.1| tRNA-specific adenosine deaminase [Yersinia frederiksenii ATCC
           33641]
 gi|238723801|gb|EEQ15446.1| tRNA-specific adenosine deaminase [Yersinia frederiksenii ATCC
           33641]
          Length = 191

 Score =  101 bits (251), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 57/143 (39%), Positives = 78/143 (54%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  AL  A  A    E+PVGA+ VL+N++I    NR     D TAHAEI+A+R G R +
Sbjct: 35  WMQRALALALRAQEEGEVPVGAILVLDNQVIGEGWNRPIRDNDPTAHAEIMALRQGGRAV 94

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  LYVTLEPC MCA A+  +RIRRL YGA++ K G   +          +H  
Sbjct: 95  QNYRLIDATLYVTLEPCVMCAGAMVHSRIRRLVYGANDLKTGAAGSLLDILRHPGMNHQI 154

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+  G+        +  FF++RR
Sbjct: 155 EVCSGVLADACSHQLSAFFRQRR 177


>gi|170017868|ref|YP_001728787.1| cytosine/adenosine deaminase [Leuconostoc citreum KM20]
 gi|169804725|gb|ACA83343.1| Cytosine/adenosine deaminase [Leuconostoc citreum KM20]
          Length = 169

 Score =  101 bits (251), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 57/145 (39%), Positives = 80/145 (55%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           + FM  AL EA  A    E+P+GAV V NN+II++A N     +  TAHAE++AI     
Sbjct: 13  DYFMQVALNEASIAFNEGEVPIGAVIVKNNQIIAKAHNHREAEQLATAHAELMAIEKANL 72

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
            L    L    L+VTLEPC MCA AI  +RI  +YYGA + KGG   +  +    A  +H
Sbjct: 73  KLKSWRLENTALFVTLEPCVMCAGAIINSRIPAVYYGADDVKGGATRSLYRLLEDARLNH 132

Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149
              ++ GI  +   Q+++ FF + R
Sbjct: 133 RVAVHHGIRSEDCGQLLKQFFAQIR 157


>gi|262040295|ref|ZP_06013546.1| tRNA-specific adenosine deaminase [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
 gi|259042404|gb|EEW43424.1| tRNA-specific adenosine deaminase [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
          Length = 180

 Score =  101 bits (251), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 57/143 (39%), Positives = 77/143 (53%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  AL  A+ A    E+PVGAV V NN++I    NR     D TAHAEI+A+R G  +L
Sbjct: 22  WMRHALTLAKRAWEEGEVPVGAVLVHNNQVIGEGWNRPIGRHDPTAHAEIMALRQGGLVL 81

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  LYVTLEPC MCA A+  +RI RL +GA + K G   +          +H  
Sbjct: 82  QNYRLIDATLYVTLEPCVMCAGAMVHSRIARLVFGARDAKTGAAGSLMDVLHHPGMNHRV 141

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
            I  G+  +    ++ DFF+ RR
Sbjct: 142 AISEGVLAESCSAMLSDFFRWRR 164


>gi|261749231|ref|YP_003256916.1| putative cytosine/adenosine deaminase [Blattabacterium sp.
           (Periplaneta americana) str. BPLAN]
 gi|261497323|gb|ACX83773.1| putative cytosine/adenosine deaminase [Blattabacterium sp.
           (Periplaneta americana) str. BPLAN]
          Length = 141

 Score =  101 bits (251), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 53/142 (37%), Positives = 79/142 (55%), Gaps = 6/142 (4%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  ALEEA  A  ++E+P+GA     N II+RA N    L D+TAHAE+L I +    L 
Sbjct: 1   MKIALEEALIAFHKDEVPIGAAITYENGIIARAHNLTETLSDITAHAEMLVINLASDYLG 60

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
           ++ + E  LYVT+EPC MCA A+  ++I R+  G  N K G +  G +       H   +
Sbjct: 61  KKYIQECTLYVTMEPCIMCAGALFFSQIGRVVCGTLNYKRGFLYTGIKL------HPRTK 114

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
              GI + + + ++Q+FF  +R
Sbjct: 115 FLSGIMKNQCKNLLQEFFFFKR 136


>gi|22125207|ref|NP_668630.1| tRNA-specific adenosine deaminase [Yersinia pestis KIM 10]
 gi|162421541|ref|YP_001607945.1| tRNA-specific adenosine deaminase [Yersinia pestis Angola]
 gi|165928230|ref|ZP_02224062.1| tRNA-specific adenosine deaminase [Yersinia pestis biovar
           Orientalis str. F1991016]
 gi|165939213|ref|ZP_02227763.1| tRNA-specific adenosine deaminase [Yersinia pestis biovar
           Orientalis str. IP275]
 gi|166008235|ref|ZP_02229133.1| tRNA-specific adenosine deaminase [Yersinia pestis biovar Antiqua
           str. E1979001]
 gi|166212350|ref|ZP_02238385.1| tRNA-specific adenosine deaminase [Yersinia pestis biovar Antiqua
           str. B42003004]
 gi|167399598|ref|ZP_02305122.1| tRNA-specific adenosine deaminase [Yersinia pestis biovar Antiqua
           str. UG05-0454]
 gi|167421139|ref|ZP_02312892.1| tRNA-specific adenosine deaminase [Yersinia pestis biovar
           Orientalis str. MG05-1020]
 gi|167423684|ref|ZP_02315437.1| tRNA-specific adenosine deaminase [Yersinia pestis biovar
           Mediaevalis str. K1973002]
 gi|167467717|ref|ZP_02332421.1| tRNA-specific adenosine deaminase [Yersinia pestis FV-1]
 gi|270489818|ref|ZP_06206892.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Yersinia pestis KIM D27]
 gi|294504520|ref|YP_003568582.1| deaminase [Yersinia pestis Z176003]
 gi|21958073|gb|AAM84881.1|AE013733_2 putative deaminase [Yersinia pestis KIM 10]
 gi|162354356|gb|ABX88304.1| tRNA-specific adenosine deaminase [Yersinia pestis Angola]
 gi|165912813|gb|EDR31440.1| tRNA-specific adenosine deaminase [Yersinia pestis biovar
           Orientalis str. IP275]
 gi|165919737|gb|EDR37070.1| tRNA-specific adenosine deaminase [Yersinia pestis biovar
           Orientalis str. F1991016]
 gi|165992617|gb|EDR44918.1| tRNA-specific adenosine deaminase [Yersinia pestis biovar Antiqua
           str. E1979001]
 gi|166206281|gb|EDR50761.1| tRNA-specific adenosine deaminase [Yersinia pestis biovar Antiqua
           str. B42003004]
 gi|166960628|gb|EDR56649.1| tRNA-specific adenosine deaminase [Yersinia pestis biovar
           Orientalis str. MG05-1020]
 gi|167052102|gb|EDR63510.1| tRNA-specific adenosine deaminase [Yersinia pestis biovar Antiqua
           str. UG05-0454]
 gi|167057854|gb|EDR67600.1| tRNA-specific adenosine deaminase [Yersinia pestis biovar
           Mediaevalis str. K1973002]
 gi|262362488|gb|ACY59209.1| deaminase [Yersinia pestis D106004]
 gi|262366507|gb|ACY63064.1| deaminase [Yersinia pestis D182038]
 gi|270338322|gb|EFA49099.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Yersinia pestis KIM D27]
 gi|294354979|gb|ADE65320.1| deaminase [Yersinia pestis Z176003]
          Length = 200

 Score =  101 bits (251), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 59/143 (41%), Positives = 77/143 (53%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  AL  A  A    E+PVGAV VL NK+I    NR     D TAHAEI+A+R G + +
Sbjct: 41  WMRHALTLALRAQEEGEVPVGAVLVLGNKVIGEGWNRPIRDNDPTAHAEIMALRQGGQAV 100

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  LYVTLEPC MCA A+  +RIRRL YGA++ K G   +          +H  
Sbjct: 101 QNYRLLDATLYVTLEPCVMCAGAMVHSRIRRLVYGANDVKTGAAGSLVDILRHPGMNHQI 160

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+  GI        +  FF++RR
Sbjct: 161 EVSAGILAIACSHQLSAFFRQRR 183


>gi|197119924|ref|YP_002140351.1| tRNA (adenosine-34) deaminase [Geobacter bemidjiensis Bem]
 gi|197089284|gb|ACH40555.1| tRNA (adenosine-34) deaminase [Geobacter bemidjiensis Bem]
          Length = 166

 Score =  101 bits (251), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 52/143 (36%), Positives = 80/143 (55%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  A+ +A+ A    E+P+GAV V +  II+R  N     +D  AHAE++AIR   + L
Sbjct: 8   WMGKAIAQARRAEAIGEVPIGAVIVKDGVIIARGHNLRESNQDPAAHAEMIAIRKAAKKL 67

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
           +   L    LYVTLEPCTMC  A+ L+R+ R+ +G+ +PKGG   +          +HS 
Sbjct: 68  ASWRLTGATLYVTLEPCTMCMGAVILSRLDRVVFGSYDPKGGAAGSLYDLSDDKRLNHSV 127

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
            + PG+  + +  ++  FF E R
Sbjct: 128 VLTPGVRGEETSSMLSGFFAELR 150


>gi|258509262|ref|YP_003172013.1| CMP/dCMP deaminase [Lactobacillus rhamnosus GG]
 gi|257149189|emb|CAR88162.1| CMP/dCMP deaminase, zinc-binding [Lactobacillus rhamnosus GG]
          Length = 168

 Score =  101 bits (251), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 57/130 (43%), Positives = 74/130 (56%), Gaps = 6/130 (4%)

Query: 23  EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEP 82
           E+P+GAV V + +II R  N     +D T HAEILAI+  CR L    L +  L+VTLEP
Sbjct: 25  EVPIGAVVVHDQQIIGRGYNLRETTQDATQHAEILAIQAACRQLGTWRLEDCSLFVTLEP 84

Query: 83  CTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL---ATCHHSPEIYPGISEQRSRQ 139
           C MCA  +  ARI   Y+GA++PK G    GT FY L      +H   + PGI    S  
Sbjct: 85  CPMCAGTMINARIATCYFGATDPKAG--VAGT-FYNLLEDTRFNHQVAVVPGIQAIASAA 141

Query: 140 IIQDFFKERR 149
           ++QDFF+  R
Sbjct: 142 LLQDFFRAIR 151


>gi|77407016|ref|ZP_00784028.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus
           agalactiae H36B]
 gi|77174376|gb|EAO77233.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus
           agalactiae H36B]
          Length = 168

 Score =  101 bits (251), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 55/143 (38%), Positives = 79/143 (55%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  AL+EA+++  + EIP+G V V +  II R  N   E      HAEI+AI      +
Sbjct: 12  FMXEALKEAKSSLEKEEIPIGCVIVKDGHIIGRGHNAREEFNKAILHAEIMAINNANEKV 71

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  L+VT+EPC MC+ AI LARI  + YGA N K G   +     + +  +H  
Sbjct: 72  GNWRLLDTTLFVTVEPCVMCSGAIGLARIPHVIYGAKNTKFGAAGSLYDILSDSRLNHRV 131

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+  GI E +  +I+QDFF++ R
Sbjct: 132 EVETGILEDQCAKIMQDFFRKGR 154


>gi|304315578|ref|YP_003850723.1| CMP/dCMP deaminase zinc-binding [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
 gi|302777080|gb|ADL67639.1| CMP/dCMP deaminase zinc-binding [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
          Length = 143

 Score =  101 bits (251), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 58/142 (40%), Positives = 79/142 (55%), Gaps = 5/142 (3%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M CA++EA  +    E+PVGAV V +  II +  N     KD T HAEI AI+  C+ + 
Sbjct: 1   MKCAIDEAVLSLKLGEMPVGAVVVKDGIIIGKGHNLKETEKDATQHAEINAIKDACKNIG 60

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
              L +  LYVTLEPC MCA AI  +RI+R+Y GA +   G    GT +  L   +   +
Sbjct: 61  DWRLNDASLYVTLEPCPMCAGAIIESRIKRVYIGAESHDSGA--AGTVYDFL---NKKVD 115

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
           +Y GI E   +++I DFF   R
Sbjct: 116 VYFGIMEDDCKKLISDFFSRLR 137


>gi|73663465|ref|YP_302246.1| cytosine adenosine deaminase [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
 gi|72495980|dbj|BAE19301.1| putative cytosine adenosine deaminase [Staphylococcus saprophyticus
           subsp. saprophyticus ATCC 15305]
          Length = 163

 Score =  101 bits (251), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 57/149 (38%), Positives = 81/149 (54%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M     +M  A+EEA+ A    E+P+GA+ V N++II+RA N     ++ TAHAE +AI+
Sbjct: 1   MTNHEFYMEVAIEEAKKAGNIGEVPIGAIIVKNDEIIARAHNLRESEQNPTAHAEHIAIQ 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
                L    L    LYVTLEPC MCA +I ++RI  + YGA +PKGG   +        
Sbjct: 61  RAAAALGSWRLEGCTLYVTLEPCVMCAGSIVMSRIPSVIYGAKDPKGGCAGSLMNLLQEP 120

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H   +  GI E+   Q++  FFK  R
Sbjct: 121 RFNHRATVEFGILEESCSQLLTAFFKNIR 149


>gi|333000872|gb|EGK20443.1| tRNA-specific adenosine deaminase [Shigella flexneri K-218]
          Length = 156

 Score =  101 bits (251), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 57/142 (40%), Positives = 77/142 (54%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  AL  A+ A    E+PVGAV V NN++I    NR     D TAHAEI+A+R G  ++ 
Sbjct: 1   MRHALTLAKRAWDEREVPVGAVLVHNNRVIGEGWNRPIGRHDPTAHAEIMALRQGGLVMQ 60

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
              L +  LYVTLEPC MCA A+  +RI R+ +GA + K G + +          +H  E
Sbjct: 61  NYRLIDATLYVTLEPCVMCAGAMIHSRIGRVVFGARDAKTGAVGSLMDVLHHPGMNHRVE 120

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
           I  GI       ++ DFF+ RR
Sbjct: 121 ITEGILADECAALLSDFFRMRR 142


>gi|313206574|ref|YP_004045751.1| cmp/dcmp deaminase zinc-binding protein [Riemerella anatipestifer
           DSM 15868]
 gi|312445890|gb|ADQ82245.1| CMP/dCMP deaminase zinc-binding protein [Riemerella anatipestifer
           DSM 15868]
 gi|315023430|gb|EFT36438.1| tRNA-specific adenosine-34 deaminase [Riemerella anatipestifer
           RA-YM]
 gi|325335978|gb|ADZ12252.1| Cytosine/adenosine deaminase [Riemerella anatipestifer RA-GD]
          Length = 143

 Score =  101 bits (251), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 55/149 (36%), Positives = 80/149 (53%), Gaps = 6/149 (4%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M     FM  A +EA  A  ++E+PVG V V N ++I+R  N    L DVTAHAE+ +I 
Sbjct: 1   MFTDEYFMRMAFQEALIAFEKDEVPVGCVIVHNERVIARGYNLTETLNDVTAHAEMQSIT 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
                L  + L +  +YVTLEPCTMCA A+  ++I R+  GA +   G ++         
Sbjct: 61  SAANALGGKYLKDCTMYVTLEPCTMCAGALFWSQISRVVIGARDEHRGFLKQNINL---- 116

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             H   +I  GI E   R ++++FFK +R
Sbjct: 117 --HPKTQISIGIMEDDCRNLVKEFFKSKR 143


>gi|50122182|ref|YP_051349.1| tRNA-specific adenosine deaminase [Pectobacterium atrosepticum
           SCRI1043]
 gi|49612708|emb|CAG76158.1| putative cytidine and deoxycytidylate deaminase [Pectobacterium
           atrosepticum SCRI1043]
          Length = 174

 Score =  101 bits (251), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 60/149 (40%), Positives = 77/149 (51%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           ++    +M  AL  AQ A    E+PVGAV VL+N+ I    NR     D TAHAEI+A+R
Sbjct: 10  LRDNEYWMRYALTLAQRAQDEGEVPVGAVLVLDNEAIGEGWNRPIGHHDPTAHAEIMALR 69

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
            G  +L    L E  LYVTLEPC MCA A+  +RI RL YGAS+ K G   +        
Sbjct: 70  QGGLVLQNYRLLETTLYVTLEPCIMCAGAMIHSRIGRLVYGASDEKTGAAGSLVDILRHP 129

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H   I  G+        +  FF+ RR
Sbjct: 130 GMNHQIVIESGVLADECSATLSAFFRMRR 158


>gi|237732543|ref|ZP_04563024.1| tRNA-specific adenosine deaminase [Citrobacter sp. 30_2]
 gi|226908082|gb|EEH94000.1| tRNA-specific adenosine deaminase [Citrobacter sp. 30_2]
          Length = 182

 Score =  101 bits (251), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 56/143 (39%), Positives = 77/143 (53%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  AL  A+ A    E+PVGAV V NN++I    NR     D TAHAEI+A+R G  +L
Sbjct: 28  WMRHALTLAKRAWDEREVPVGAVLVHNNRVIGEGWNRPIGHHDPTAHAEIMALRQGGLVL 87

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  LYVTLEPC MCA A+  +RI R+ +GA + K G   +          +H  
Sbjct: 88  QNYRLLDATLYVTLEPCVMCAGAMVHSRIGRVVFGARDAKTGAAGSLMDVLHHPGMNHRV 147

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+  G+       ++ DFF+ RR
Sbjct: 148 EVTEGVLRDECATLLSDFFRMRR 170


>gi|260550109|ref|ZP_05824323.1| cytosine/adenosine deaminase [Acinetobacter sp. RUH2624]
 gi|260406864|gb|EEX00343.1| cytosine/adenosine deaminase [Acinetobacter sp. RUH2624]
          Length = 167

 Score =  101 bits (251), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 59/140 (42%), Positives = 76/140 (54%), Gaps = 1/140 (0%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  A E+A+ AA + EIPVGAV V  NK+I    N    L D TAHAEI AIR  C++L
Sbjct: 9   WMQLAYEQAELAAEQGEIPVGAVIVSQNKLIGAGFNAPIGLSDPTAHAEIQAIRSACQLL 68

Query: 67  SQEILPE-VDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
               LPE   LYVTLEPCTMC  A+  ARI+ + +G   PK G + +  Q       +H 
Sbjct: 69  KNYRLPEDATLYVTLEPCTMCVGALVHARIKHVVFGTVEPKAGSLVSTRQLLENGYYNHK 128

Query: 126 PEIYPGISEQRSRQIIQDFF 145
                G   ++  Q +  FF
Sbjct: 129 FTFEQGCLHEKCAQQLSLFF 148


>gi|166031359|ref|ZP_02234188.1| hypothetical protein DORFOR_01047 [Dorea formicigenerans ATCC
           27755]
 gi|166028764|gb|EDR47521.1| hypothetical protein DORFOR_01047 [Dorea formicigenerans ATCC
           27755]
          Length = 157

 Score =  101 bits (251), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 53/143 (37%), Positives = 80/143 (55%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  A+++A+ A    E+P+G V V  +KII+R  NR    K+  AHAE+ AIR   + +
Sbjct: 7   YMREAIKQAKKAYAIGEVPIGCVIVYQDKIIARGYNRRTIDKNTLAHAELQAIRKASKKM 66

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L E  +YVTLEPC MC+ AI  +R+ R+  G  NPK G   +      +   +H  
Sbjct: 67  EDWRLEECTMYVTLEPCQMCSGAIVQSRMTRVVVGCMNPKAGCAGSILNLLQMPQFNHQV 126

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+  G+ E+   Q+++ FFKE R
Sbjct: 127 ELTTGVLEEECSQMMKTFFKELR 149


>gi|320157222|ref|YP_004189601.1| tRNA-specific adenosine-34 deaminase [Vibrio vulnificus MO6-24/O]
 gi|319932534|gb|ADV87398.1| tRNA-specific adenosine-34 deaminase [Vibrio vulnificus MO6-24/O]
          Length = 181

 Score =  101 bits (251), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 55/147 (37%), Positives = 79/147 (53%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
           +  VFM  A+E A  A    E+PVGAV V + ++I+   N++    D TAHAEI  +R  
Sbjct: 11  QDEVFMRRAIELAAIAESEGEVPVGAVLVKDGEVIAEGWNQSIGQHDATAHAEIQTLRQA 70

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
            + L    L +  LYVTLEPC MCA A+  +R++R+ +GA + K G        ++    
Sbjct: 71  GQSLGNYRLLDTTLYVTLEPCPMCAGALLHSRVKRIVFGAPDLKAGAAGTVLDLFSSQAA 130

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H   I  G+ E   R  +Q FFK RR
Sbjct: 131 YHYATIEKGLLESECRDQLQAFFKRRR 157


>gi|323978411|gb|EGB73496.1| cytidine and deoxycytidylate deaminase zinc-binding protein
           [Escherichia coli TW10509]
          Length = 167

 Score =  101 bits (251), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 57/143 (39%), Positives = 77/143 (53%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  AL  A+ A    E+PVGAV V NN++I    NR     D TAHAEI+A+R G  ++
Sbjct: 11  WMRHALTLAKRAWDEREVPVGAVLVHNNRVIGEGWNRPIGRHDPTAHAEIMALRQGGLVM 70

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  LYVTLEPC MCA A+  +RI R+ +GA + K G   +          +H  
Sbjct: 71  QNYRLIDATLYVTLEPCVMCAGAMIHSRISRVVFGARDAKTGAAGSLMDVLHHPGMNHRV 130

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           EI  GI       ++ DFF+ RR
Sbjct: 131 EITEGILADECAALLSDFFRMRR 153


>gi|330443784|ref|YP_004376770.1| cytidine/deoxycytidylate deaminase family protein [Chlamydophila
           pecorum E58]
 gi|328806894|gb|AEB41067.1| cytidine/deoxycytidylate deaminase family protein [Chlamydophila
           pecorum E58]
          Length = 156

 Score =  101 bits (251), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 58/149 (38%), Positives = 84/149 (56%), Gaps = 1/149 (0%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           ++K   FM+ AL+EA+ A  ++E+PVG V V ++KII+R  N   +L+D TAHAEIL I 
Sbjct: 3   IEKNLFFMNEALKEARKAYSQDEVPVGCVLVKDDKIIARGHNSVEKLQDPTAHAEILCIG 62

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
                +    L    LY TLEPC MCA AI LARI R+ +GA + + G   +    +   
Sbjct: 63  AAAEFVQNWRLVNTTLYCTLEPCLMCAGAIQLARISRVVWGAPDLRLGACGSWINVFAQK 122

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
              H+ E      E+  R +++ FF E+R
Sbjct: 123 HPFHTVECSKIYCEESER-LMKQFFIEKR 150


>gi|169796135|ref|YP_001713928.1| putative deaminase [Acinetobacter baumannii AYE]
 gi|301597400|ref|ZP_07242408.1| putative deaminase [Acinetobacter baumannii AB059]
 gi|169149062|emb|CAM86939.1| putative deaminase [Acinetobacter baumannii AYE]
          Length = 167

 Score =  100 bits (250), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 59/140 (42%), Positives = 75/140 (53%), Gaps = 1/140 (0%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  A E+A+ AA + EIPVGAV V  NK+I    N    L D TAHAEI AIR  C  L
Sbjct: 9   WMQLAYEQAELAAKQGEIPVGAVIVSQNKLIGAGFNAPIGLSDPTAHAEIQAIRAACESL 68

Query: 67  SQEILPE-VDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
               LPE   LYVTLEPCTMC  A+  ARI+ + +G + PK G + +  Q       +H 
Sbjct: 69  KNYRLPEDATLYVTLEPCTMCVGALVHARIKHVVFGTTEPKAGSLVSARQLLENGYYNHK 128

Query: 126 PEIYPGISEQRSRQIIQDFF 145
                G   ++  Q +  FF
Sbjct: 129 FTFEHGCLHEKCAQQLSLFF 148


>gi|295089886|emb|CBK75993.1| Cytosine/adenosine deaminases [Clostridium cf. saccharolyticum K10]
          Length = 214

 Score =  100 bits (250), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 57/143 (39%), Positives = 76/143 (53%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  A+ +A+ A    E+P+G V V   KII R  NR     +V AHAEILAIR  CRI+
Sbjct: 45  YMREAVRQAKKAWALGEVPIGCVIVHRGKIIGRGYNRRTTDGNVLAHAEILAIRKACRII 104

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L E  +YVTLEPC MCA AI  ARI ++  G  NPK G   +          +H  
Sbjct: 105 GDWRLEECTMYVTLEPCPMCAGAIVQARIPKVVIGCMNPKAGCAGSVLDLLHEEGFNHQA 164

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E   G   +    ++++FF+E R
Sbjct: 165 ETEVGTLGEECSSMLKEFFRELR 187


>gi|210613778|ref|ZP_03289892.1| hypothetical protein CLONEX_02100 [Clostridium nexile DSM 1787]
 gi|210150987|gb|EEA81995.1| hypothetical protein CLONEX_02100 [Clostridium nexile DSM 1787]
          Length = 158

 Score =  100 bits (250), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 51/149 (34%), Positives = 83/149 (55%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M K   +M  A+++A+ A    E+P+G V V  +KII R  NR    K+  AHAE++AI+
Sbjct: 2   MNKDEKYMKEAIKQAKKAYALGEVPIGCVIVYEDKIIGRGYNRRTIDKNTIAHAEMMAIK 61

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              + +    L +  +YVTLEPC MC+ AI  +R++++  G  NPK G   +      + 
Sbjct: 62  KASKKMDDWRLEDCTMYVTLEPCQMCSGAIVQSRMKKVVVGCMNPKAGCAGSILNLLQME 121

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  E+  G+ E+    ++++FFKE R
Sbjct: 122 EFNHQVELEIGVLEEECSALMKNFFKELR 150


>gi|251791894|ref|YP_003006614.1| tRNA-specific adenosine deaminase [Aggregatibacter aphrophilus
           NJ8700]
 gi|247533281|gb|ACS96527.1| tRNA-specific adenosine deaminase [Aggregatibacter aphrophilus
           NJ8700]
          Length = 174

 Score =  100 bits (250), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 61/144 (42%), Positives = 81/144 (56%), Gaps = 1/144 (0%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           FM  AL  A  A    EIPVGAV V    +II    N +    D TAHAEI+A+R G + 
Sbjct: 12  FMRHALMLADKAEALGEIPVGAVLVSAEGEIIGEGWNLSIIDSDPTAHAEIVALRQGGQR 71

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           L    L    LYVTLEPCTMCA AI  +RI+RL +GA++ K G + +   F+     +H 
Sbjct: 72  LQNYRLLNATLYVTLEPCTMCAGAILHSRIKRLVFGAADYKTGAVGSRFHFFDDYKMNHV 131

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
            EI  G+ +Q   + +  FF++RR
Sbjct: 132 VEITGGVLQQECSEKLSAFFQKRR 155


>gi|325273807|ref|ZP_08139995.1| CMP/dCMP deaminase zinc-binding protein [Pseudomonas sp. TJI-51]
 gi|324101066|gb|EGB98724.1| CMP/dCMP deaminase zinc-binding protein [Pseudomonas sp. TJI-51]
          Length = 159

 Score =  100 bits (250), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 58/143 (40%), Positives = 81/143 (56%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  AL  A   A   E+PVGAV V + ++I +  NR     D +AHAE++AIR   +  
Sbjct: 14  YMRLALSLAAEGAALGEVPVGAVLVQHGQVIGQGFNRPIIDSDPSAHAEMVAIRAAAKAA 73

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
           S   LP   LYVTLEPC+MCA  I  +R+ R+ +GA  PK G +++  QF+     +H  
Sbjct: 74  SNYRLPGSTLYVTLEPCSMCAGLIVHSRVMRVVFGALEPKAGIVQSQGQFFGQGFLNHRV 133

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
            +  G+  Q   QI+ DFFK RR
Sbjct: 134 MVEGGVLAQECGQILSDFFKARR 156


>gi|293608246|ref|ZP_06690549.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|292828819|gb|EFF87181.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|325122022|gb|ADY81545.1| tRNA-specific adenosine deaminase [Acinetobacter calcoaceticus
           PHEA-2]
          Length = 167

 Score =  100 bits (250), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 58/140 (41%), Positives = 75/140 (53%), Gaps = 1/140 (0%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  A E+A+ AA + EIPVGAV V  N++I    N    L D TAHAEI AIR  C  L
Sbjct: 9   WMQLAYEQAELAAQQGEIPVGAVLVSQNRVIGSGYNAPITLLDPTAHAEIQAIRAACSSL 68

Query: 67  SQEILPE-VDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
               LPE   LYVTLEPCTMC  A+  ARI+ + +G   PK G + +  Q       +H 
Sbjct: 69  ENYRLPEDTTLYVTLEPCTMCVGALVHARIKHVVFGTPEPKAGSLVSARQLLQQGYYNHR 128

Query: 126 PEIYPGISEQRSRQIIQDFF 145
                G  +++  Q +  FF
Sbjct: 129 FTFQNGCLQEKCAQQLSHFF 148


>gi|301510605|ref|ZP_07235842.1| putative deaminase [Acinetobacter baumannii AB058]
          Length = 167

 Score =  100 bits (250), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 59/140 (42%), Positives = 75/140 (53%), Gaps = 1/140 (0%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  A E+A+ AA + EIPVGAV V  NK+I    N    L D TAHAEI AIR  C  L
Sbjct: 9   WMQLAYEQAELAAKQGEIPVGAVIVSQNKLIGAGFNAPIGLSDPTAHAEIQAIRAACESL 68

Query: 67  SQEILPE-VDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
               LPE   LYVTLEPCTMC  A+  ARI+ + +G + PK G + +  Q       +H 
Sbjct: 69  KNYRLPEDATLYVTLEPCTMCVGALVHARIKHVVFGTTEPKAGSLVSARQLLENGYYNHK 128

Query: 126 PEIYPGISEQRSRQIIQDFF 145
                G   ++  Q +  FF
Sbjct: 129 FTFEHGCLHEKCAQQLSLFF 148


>gi|255021639|ref|ZP_05293681.1| tRNA-specific adenosine-34 deaminase [Acidithiobacillus caldus ATCC
           51756]
 gi|254968899|gb|EET26419.1| tRNA-specific adenosine-34 deaminase [Acidithiobacillus caldus ATCC
           51756]
          Length = 178

 Score =  100 bits (250), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 57/144 (39%), Positives = 82/144 (56%), Gaps = 1/144 (0%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           +M  ALE+A+ A+L  E+PVGAV +  +  +++RA NR   ++D  AHAEIL +R   R 
Sbjct: 27  WMGLALEQARCASLVGEVPVGAVLLSASGALLARAHNRPIAMQDPCAHAEILVLREAARA 86

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           L    L    LYVTLEPC MCA A+  AR+ +L + A +PKGG + +           H 
Sbjct: 87  LGNYRLLGTTLYVTLEPCAMCAGAMLQARVAQLVFAARDPKGGAVVSRLGVLDAEPRLHR 146

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
                G   + S+ ++QDFF+ RR
Sbjct: 147 LRWREGPGARESQALLQDFFRARR 170


>gi|153830778|ref|ZP_01983445.1| zinc-binding domain protein [Vibrio cholerae 623-39]
 gi|148873734|gb|EDL71869.1| zinc-binding domain protein [Vibrio cholerae 623-39]
          Length = 193

 Score =  100 bits (250), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 55/143 (38%), Positives = 78/143 (54%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  A+  A  A  + E+PVGAV V + +II+   N +    D TAHAEI  IR   + L
Sbjct: 31  FMRRAIALATQAEAQGEVPVGAVLVRDGEIIAEGWNGSITNHDATAHAEIEVIRKAGKAL 90

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
           S   L +  LYVTLEPC MCA A+  +R++R+ YGA + K G        ++    +H  
Sbjct: 91  SNYRLLDTTLYVTLEPCPMCAGALLHSRVKRIVYGAPDLKAGAAGTVMDLFSSQAAYHYA 150

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
            +  G+ E+  R  +Q FF+ RR
Sbjct: 151 TVEKGLLEEECRAQLQAFFQRRR 173


>gi|261820536|ref|YP_003258642.1| tRNA-specific adenosine deaminase [Pectobacterium wasabiae WPP163]
 gi|261604549|gb|ACX87035.1| CMP/dCMP deaminase zinc-binding protein [Pectobacterium wasabiae
           WPP163]
          Length = 168

 Score =  100 bits (250), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 61/143 (42%), Positives = 74/143 (51%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  AL  AQ A    E+PVGAV VL+NK I    NR     D TAHAEI+A+R G  +L
Sbjct: 10  WMRYALALAQRAQDEGEVPVGAVLVLDNKAIGEGWNRPIGHHDPTAHAEIMALRQGGAVL 69

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L E  LYVTLEPC MCA A+   RI RL YGAS+ K G   +          +H  
Sbjct: 70  QNYRLLETTLYVTLEPCIMCAGAMIHGRIGRLVYGASDEKTGAAGSLLDILRHPGMNHQI 129

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
            I  G+        +  FF+ RR
Sbjct: 130 VIESGVLAGECSATLSAFFRLRR 152


>gi|157157409|ref|YP_001463881.1| tRNA-specific adenosine deaminase [Escherichia coli E24377A]
 gi|193064070|ref|ZP_03045155.1| tRNA-specific adenosine deaminase [Escherichia coli E22]
 gi|194427252|ref|ZP_03059802.1| tRNA-specific adenosine deaminase [Escherichia coli B171]
 gi|293446913|ref|ZP_06663335.1| yfhC [Escherichia coli B088]
 gi|309794388|ref|ZP_07688811.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Escherichia coli MS 145-7]
 gi|157079439|gb|ABV19147.1| tRNA-specific adenosine deaminase [Escherichia coli E24377A]
 gi|192929305|gb|EDV82914.1| tRNA-specific adenosine deaminase [Escherichia coli E22]
 gi|194414573|gb|EDX30845.1| tRNA-specific adenosine deaminase [Escherichia coli B171]
 gi|195183132|dbj|BAG66679.1| putative deaminase [Escherichia coli O111:H-]
 gi|291323743|gb|EFE63171.1| yfhC [Escherichia coli B088]
 gi|308121844|gb|EFO59106.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Escherichia coli MS 145-7]
 gi|323159237|gb|EFZ45226.1| tRNA-specific adenosine deaminase [Escherichia coli E128010]
          Length = 178

 Score =  100 bits (250), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 57/143 (39%), Positives = 77/143 (53%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  AL  A+ A    E+PVGAV V NN++I    NR     D TAHAEI+A+R G  ++
Sbjct: 22  WMRHALTLAKRAWDEREVPVGAVLVHNNRVIGEGWNRPIGRHDPTAHAEIMALRQGGLVM 81

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  LYVTLEPC MCA A+  +RI R+ +GA + K G   +          +H  
Sbjct: 82  QNYRLIDATLYVTLEPCVMCAGAMIHSRIGRVVFGAHDAKTGAAGSLMDVLHHPGMNHRV 141

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           EI  GI       ++ DFF+ RR
Sbjct: 142 EITEGILADECAALLSDFFRMRR 164


>gi|56478507|ref|YP_160096.1| cytosine/adenosine deaminase [Aromatoleum aromaticum EbN1]
 gi|56314550|emb|CAI09195.1| probable cytosine/adenosine deaminases [Aromatoleum aromaticum
           EbN1]
          Length = 154

 Score =  100 bits (250), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 52/143 (36%), Positives = 80/143 (55%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  ALE+A+ A   +E+PVGAV VL+ +I+ R  N+     D +AHAE++A+R     L
Sbjct: 6   FMRAALEQARMAGACDEVPVGAVVVLDGEIVGRGFNQPIRRHDPSAHAEVMALRDAGERL 65

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
                P  +L+VTLEPC MC+ AI  AR+ R+ +GA +P+ G   +    +     +H  
Sbjct: 66  GNYRFPGCELFVTLEPCAMCSGAIMHARVARVVFGARDPRTGVAGSIIDLFAERRLNHHA 125

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+  G+      +++  FF  RR
Sbjct: 126 EVAGGVLADECGRLLSGFFAARR 148


>gi|116617403|ref|YP_817774.1| tRNA-adenosine deaminase [Leuconostoc mesenteroides subsp.
           mesenteroides ATCC 8293]
 gi|116096250|gb|ABJ61401.1| tRNA-adenosine deaminase [Leuconostoc mesenteroides subsp.
           mesenteroides ATCC 8293]
          Length = 168

 Score =  100 bits (250), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 59/145 (40%), Positives = 79/145 (54%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           + FM  AL EA+ A    E+P+GAV V  N++I+ A N     +  TAHAE+LAI     
Sbjct: 13  DYFMQEALNEAKIAQSEGEVPIGAVIVYENQMIACAHNHREADQLATAHAELLAIESANT 72

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
            L    L    L+VTLEPC MCA AI  ARI  +YYGA++PKGG   +          +H
Sbjct: 73  KLKSWRLENTALFVTLEPCIMCAGAIINARIPVVYYGANDPKGGATRSLYSLLEDNRLNH 132

Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149
             ++Y GI  + S  ++Q FF   R
Sbjct: 133 MVKVYEGIRGEESGLLLQRFFSNIR 157


>gi|326577134|gb|EGE27028.1| tRNA-specific adenosine deaminase [Moraxella catarrhalis O35E]
          Length = 181

 Score =  100 bits (250), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 58/143 (40%), Positives = 81/143 (56%), Gaps = 1/143 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M+ ALE A+  A   EIPVGAV V   +I+    N     +D TAHAEI+A+R  C  L+
Sbjct: 29  MNRALEIAKQGAKFGEIPVGAVVVYEGRILGEGYNCPITTQDPTAHAEIVAVRRACETLN 88

Query: 68  QEILPE-VDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
              LP+   LYVTLEPCTMC  A+  ARI  + +GA  PK G + +  +    A  +H  
Sbjct: 89  NYRLPKGCILYVTLEPCTMCFGALIHARISHVVFGAFEPKAGVVISQLKLPEQAFYNHRL 148

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
            +Y G+   +S  ++  FF++RR
Sbjct: 149 SVYGGLLADKSSALLSGFFRQRR 171


>gi|319946112|ref|ZP_08020360.1| tRNA-specific adenosine deaminase [Streptococcus australis ATCC
           700641]
 gi|319747758|gb|EFW00004.1| tRNA-specific adenosine deaminase [Streptococcus australis ATCC
           700641]
          Length = 170

 Score =  100 bits (250), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 57/149 (38%), Positives = 82/149 (55%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +++   FM  AL+EA+ A    EIP+G V V + +II R  N   EL+    HAE++AI 
Sbjct: 6   LEEKEAFMREALKEAEIALAHEEIPIGCVIVKDGEIIGRGHNAREELQRAVMHAEVMAIE 65

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              +      L +  L+VT+EPC MC+ AI LARI ++ YGA+N K GG  +     T  
Sbjct: 66  EANQKEKSWRLLDTTLFVTIEPCVMCSGAIGLARIPQVIYGATNQKFGGAGSLYDILTDE 125

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  E+  GI E     I+Q FF++ R
Sbjct: 126 RLNHRVEVETGILEAECAAIMQTFFRQGR 154


>gi|193068331|ref|ZP_03049294.1| tRNA-specific adenosine deaminase [Escherichia coli E110019]
 gi|260845189|ref|YP_003222967.1| tRNA-specific adenosine deaminase [Escherichia coli O103:H2 str.
           12009]
 gi|192958283|gb|EDV88723.1| tRNA-specific adenosine deaminase [Escherichia coli E110019]
 gi|257760336|dbj|BAI31833.1| tRNA-specific adenosine deaminase [Escherichia coli O103:H2 str.
           12009]
          Length = 167

 Score =  100 bits (250), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 57/143 (39%), Positives = 77/143 (53%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  AL  A+ A    E+PVGAV V NN++I    NR     D TAHAEI+A+R G  ++
Sbjct: 11  WMRHALTLAKRAWDEREVPVGAVLVHNNRVIGEGWNRPIGRHDPTAHAEIMALRQGGLVM 70

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  LYVTLEPC MCA A+  +RI R+ +GA + K G   +          +H  
Sbjct: 71  QNYRLIDATLYVTLEPCVMCAGAMIHSRIGRVVFGAHDAKTGAAGSLMDVLHHPGMNHRV 130

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           EI  GI       ++ DFF+ RR
Sbjct: 131 EITEGILADECAALLSDFFRMRR 153


>gi|148244957|ref|YP_001219651.1| hypothetical protein COSY_0821 [Candidatus Vesicomyosocius okutanii
           HA]
 gi|146326784|dbj|BAF61927.1| conserved hypothetical protein [Candidatus Vesicomyosocius okutanii
           HA]
          Length = 153

 Score =  100 bits (250), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 56/143 (39%), Positives = 80/143 (55%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M+ A+E+A+ A    EIPVGA+ + NN++I  A N+     D TAHAEI  +R+  + L
Sbjct: 8   WMTLAIEQAKQAQQIGEIPVGAILIQNNQLIGGAHNQTILNNDPTAHAEIQLLRIAGKKL 67

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
           +   L    LYVTLEPCTMC  AI  ARI  + +GA + K G   +          +H  
Sbjct: 68  NNYRLSGTTLYVTLEPCTMCLGAIVHARISCIVFGAYDKKSGACGSCIDLLNNRCFNHLI 127

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
            I  GI   + + ++QDFFK +R
Sbjct: 128 SIKSGILADQCKNLLQDFFKNKR 150


>gi|283796876|ref|ZP_06346029.1| tRNA-specific adenosine deaminase [Clostridium sp. M62/1]
 gi|291075284|gb|EFE12648.1| tRNA-specific adenosine deaminase [Clostridium sp. M62/1]
          Length = 215

 Score =  100 bits (250), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 57/143 (39%), Positives = 76/143 (53%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  A+ +A+ A    E+P+G V V   KII R  NR     +V AHAEILAIR  CRI+
Sbjct: 46  YMREAVRQAKKAWALGEVPIGCVIVHRGKIIGRGYNRRTTDGNVLAHAEILAIRKACRII 105

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L E  +YVTLEPC MCA AI  ARI ++  G  NPK G   +          +H  
Sbjct: 106 GDWRLEECTMYVTLEPCPMCAGAIVQARIPKVVIGCMNPKAGCAGSVLDLLHEEGFNHQA 165

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E   G   +    ++++FF+E R
Sbjct: 166 ETEVGTLGEECSSMLKEFFRELR 188


>gi|160894462|ref|ZP_02075238.1| hypothetical protein CLOL250_02014 [Clostridium sp. L2-50]
 gi|156863773|gb|EDO57204.1| hypothetical protein CLOL250_02014 [Clostridium sp. L2-50]
          Length = 214

 Score =  100 bits (250), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 51/144 (35%), Positives = 81/144 (56%)

Query: 6   VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           ++M  A++ AQ A ++ ++P+G V V +NK+I+R  N+    K   AHAE+LAI    + 
Sbjct: 61  IYMKKAIKLAQKAYVQGDVPIGCVIVKDNKVIARGYNKRNLKKTTLAHAELLAIEQASKK 120

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           L    L +  +YVTLEPC MCA AI  ARI ++  G  N K G   +    + ++  +H 
Sbjct: 121 LGDWRLEDCTMYVTLEPCQMCAGAIVQARIPKVVIGCMNKKAGCAGSILNMFDMSAFNHQ 180

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
            E   GI ++    +++DFF + R
Sbjct: 181 VETVYGICQEECSSLMKDFFADLR 204


>gi|330504655|ref|YP_004381524.1| CMP/dCMP deaminase, zinc-binding protein [Pseudomonas mendocina
           NK-01]
 gi|328918941|gb|AEB59772.1| CMP/dCMP deaminase, zinc-binding protein [Pseudomonas mendocina
           NK-01]
          Length = 158

 Score =  100 bits (250), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 55/143 (38%), Positives = 82/143 (57%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  AL +A+  A + E+PVGAV V + +++ +  N      D +AHAE++AIR   + +
Sbjct: 15  FMRLALAQARLGAGQGEVPVGAVLVQDGEVVGQGFNCPILRHDPSAHAEMVAIRAAAQSV 74

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               LP   LYVTLEPC+MCA  I  ARI R+ + AS P+ G   +  QF+     +H  
Sbjct: 75  QNYRLPGSTLYVTLEPCSMCAGLIVHARIARVVFAASEPRAGVAISQGQFFDQGFLNHRV 134

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
            +  G+  + S  +++DFFK RR
Sbjct: 135 LVEGGLLAEESGALLKDFFKARR 157


>gi|261880583|ref|ZP_06007010.1| tRNA-specific adenosine deaminase [Prevotella bergensis DSM 17361]
 gi|270332702|gb|EFA43488.1| tRNA-specific adenosine deaminase [Prevotella bergensis DSM 17361]
          Length = 151

 Score =  100 bits (250), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 56/148 (37%), Positives = 83/148 (56%), Gaps = 5/148 (3%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           +K   +M  A++EA+ A    EIP+GA+ V  ++IISRA N+   L DVTAHAE+LAI  
Sbjct: 9   QKDERYMRMAIQEAEAAFEEGEIPIGAIVVCRDRIISRAHNQTETLNDVTAHAEMLAITA 68

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
               +  + LP+  LYVT+EPC MCA AI  ++I R+ YG    K      G + Y    
Sbjct: 69  AANTMGGKYLPDCTLYVTVEPCVMCAGAIGWSQIGRIVYGVGEEK-----RGYKRYAPDA 123

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            H    +  G+ ++  + ++  FFK +R
Sbjct: 124 LHPKTTVTSGVLQEECKALMISFFKNKR 151


>gi|169633380|ref|YP_001707116.1| putative deaminase [Acinetobacter baumannii SDF]
 gi|169152172|emb|CAP01075.1| putative deaminase [Acinetobacter baumannii]
          Length = 166

 Score =  100 bits (250), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 59/140 (42%), Positives = 75/140 (53%), Gaps = 1/140 (0%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  A E+A+ AA + EIPVGAV V  NK+I    N    L D TAHAEI AIR  C  L
Sbjct: 9   WMQLAYEQAELAAEQGEIPVGAVIVSQNKLIGAGFNAPIGLSDPTAHAEIQAIRAACESL 68

Query: 67  SQEILPE-VDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
               LPE   LYVTLEPCTMC  A+  ARI+ + +G + PK G + +  Q       +H 
Sbjct: 69  KNYRLPEDATLYVTLEPCTMCVGALVHARIKHVVFGTTEPKAGSLVSARQLLENGYYNHK 128

Query: 126 PEIYPGISEQRSRQIIQDFF 145
                G   ++  Q +  FF
Sbjct: 129 FTFEHGCLHEKCAQQLSLFF 148


>gi|27363814|ref|NP_759342.1| tRNA-specific adenosine-34 deaminase [Vibrio vulnificus CMCP6]
 gi|27359931|gb|AAO08869.1| tRNA-specific adenosine-34 deaminase [Vibrio vulnificus CMCP6]
          Length = 181

 Score =  100 bits (250), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 55/147 (37%), Positives = 80/147 (54%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
           +  VFM  A+E A  A    E+PVGAV V + ++I+   N++    D TAHAEI  +R  
Sbjct: 11  QDEVFMRRAIELAAIAESEGEVPVGAVLVKDGEVIAEGWNQSIGQHDATAHAEIQTLRQA 70

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
            + L    L +  LYVTLEPC MCA A+  +R++R+ +GA + K G        ++    
Sbjct: 71  GQSLGNYRLLDTTLYVTLEPCPMCAGALLHSRVKRIVFGAPDLKAGAAGTVLDLFSSQAA 130

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H   I  G+ E   R+ +Q FFK RR
Sbjct: 131 YHYATIEKGLLELECREQLQAFFKRRR 157


>gi|289825514|ref|ZP_06544721.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-3139]
          Length = 172

 Score =  100 bits (250), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 56/143 (39%), Positives = 77/143 (53%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  AL  A+ A    E+PVGAV V N+++I    NR     D TAHAEI+A+R G  +L
Sbjct: 11  WMRHALTLAKRAWDEREVPVGAVLVHNHRVIGEGWNRPIGRHDPTAHAEIMALRQGGLVL 70

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  LYVTLEPC MCA A+  +RI R+ +GA + K G   +          +H  
Sbjct: 71  QNYRLLDTTLYVTLEPCVMCAGAMVHSRIGRVVFGARDAKTGAARSLIDVLHHPGMNHRV 130

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           EI  G+       ++ DFF+ RR
Sbjct: 131 EIIEGVLRDECATLLSDFFRMRR 153


>gi|294635160|ref|ZP_06713669.1| tRNA-specific adenosine deaminase [Edwardsiella tarda ATCC 23685]
 gi|291091465|gb|EFE24026.1| tRNA-specific adenosine deaminase [Edwardsiella tarda ATCC 23685]
          Length = 182

 Score =  100 bits (250), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 54/129 (41%), Positives = 75/129 (58%)

Query: 21  RNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80
           + E+PVGAV VL++++I    NR     D TAHAEI+A++ G  +L    L E  LYVTL
Sbjct: 33  QGEVPVGAVLVLDDQVIGEGWNRPITRHDPTAHAEIMALQQGGAVLQNYRLLEATLYVTL 92

Query: 81  EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140
           EPC MCA A+  +RIRRL YGAS+ K G   +          +H  E+  G+  +     
Sbjct: 93  EPCVMCAGAMVHSRIRRLVYGASDLKTGAAGSLLDVLGHPGMNHRIEVCGGVLAEACAAQ 152

Query: 141 IQDFFKERR 149
           + DFF++RR
Sbjct: 153 LSDFFRQRR 161


>gi|117929225|ref|YP_873776.1| tRNA-adenosine deaminase [Acidothermus cellulolyticus 11B]
 gi|117649688|gb|ABK53790.1| tRNA-adenosine deaminase [Acidothermus cellulolyticus 11B]
          Length = 144

 Score =  100 bits (250), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 56/143 (39%), Positives = 77/143 (53%), Gaps = 1/143 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  AL+EA  A    ++PVGA+ +     ++ R  N+     D TAHAEI+A+R     L
Sbjct: 1   MRLALQEAARAEKVADVPVGAIVLGPGGDVLGRGHNQREAAADPTAHAEIVALRAAAWRL 60

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
            +  L    L VTLEPCTMCA AI LAR+ RL YGA +PK G + +          +H P
Sbjct: 61  GRWRLDGCTLVVTLEPCTMCAGAIVLARLDRLVYGAVDPKSGAVGSLWDVVRDRRLNHRP 120

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+  G+      Q+++ FF  RR
Sbjct: 121 EVIAGVLADECGQVLRTFFSGRR 143


>gi|332851789|ref|ZP_08433714.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Acinetobacter baumannii 6013150]
 gi|332865831|ref|ZP_08436615.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Acinetobacter baumannii 6013113]
 gi|332729796|gb|EGJ61131.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Acinetobacter baumannii 6013150]
 gi|332735043|gb|EGJ66128.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Acinetobacter baumannii 6013113]
          Length = 170

 Score =  100 bits (250), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 59/140 (42%), Positives = 75/140 (53%), Gaps = 1/140 (0%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  A E+A+ AA + EIPVGAV V  NK+I    N    L D TAHAEI AIR  C  L
Sbjct: 9   WMQLAYEQAELAAEQGEIPVGAVIVSQNKLIGAGFNAPIGLSDPTAHAEIQAIRAACESL 68

Query: 67  SQEILPE-VDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
               LPE   LYVTLEPCTMC  A+  ARI+ + +G + PK G + +  Q       +H 
Sbjct: 69  KNYRLPEDATLYVTLEPCTMCVGALVHARIKHVVFGTTEPKAGSLVSARQLLENGYYNHK 128

Query: 126 PEIYPGISEQRSRQIIQDFF 145
                G   ++  Q +  FF
Sbjct: 129 FTFEHGCLHEKCAQQLSLFF 148


>gi|260555185|ref|ZP_05827406.1| cytosine/adenosine deaminase [Acinetobacter baumannii ATCC 19606]
 gi|260411727|gb|EEX05024.1| cytosine/adenosine deaminase [Acinetobacter baumannii ATCC 19606]
          Length = 167

 Score =  100 bits (250), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 59/140 (42%), Positives = 75/140 (53%), Gaps = 1/140 (0%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  A E+A+ AA + EIPVGAV V  NK+I    N    L D TAHAEI AIR  C  L
Sbjct: 9   WMQLAYEQAELAAEQGEIPVGAVIVSQNKLIGAGFNAPIGLSDPTAHAEIQAIRAACESL 68

Query: 67  SQEILPE-VDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
               LPE   LYVTLEPCTMC  A+  ARI+ + +G + PK G + +  Q       +H 
Sbjct: 69  KNYRLPEDATLYVTLEPCTMCVGALVHARIKHVVFGTTEPKAGSLVSARQLLENGYYNHK 128

Query: 126 PEIYPGISEQRSRQIIQDFF 145
                G   ++  Q +  FF
Sbjct: 129 FTFEHGCLHEKCAQQLSLFF 148


>gi|109899420|ref|YP_662675.1| CMP/dCMP deaminase, zinc-binding [Pseudoalteromonas atlantica T6c]
 gi|109701701|gb|ABG41621.1| tRNA-adenosine deaminase [Pseudoalteromonas atlantica T6c]
          Length = 162

 Score =  100 bits (250), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 56/149 (37%), Positives = 82/149 (55%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +++  ++M  AL  A  AA   EIPVGAV V + KI+    N++  L D +AHAE+LAIR
Sbjct: 3   LEQDQLWMRHALSLASKAAQAGEIPVGAVLVKDQKIVGEGWNQSITLNDPSAHAEMLAIR 62

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
                +    L +  LYVTLEPCTMCA  +  +RI+RL +GA + K G   +        
Sbjct: 63  QAGINVKNYRLIDTTLYVTLEPCTMCAGLLVHSRIKRLVFGAYDAKTGAAGSIMDVLNDT 122

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  E+  G+  +   + I  FF++RR
Sbjct: 123 RLNHQVEVVGGVLGEECGETISAFFRQRR 151


>gi|304385470|ref|ZP_07367815.1| tRNA-specific adenosine deaminase [Pediococcus acidilactici DSM
           20284]
 gi|304328677|gb|EFL95898.1| tRNA-specific adenosine deaminase [Pediococcus acidilactici DSM
           20284]
          Length = 161

 Score =  100 bits (250), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 53/146 (36%), Positives = 82/146 (56%), Gaps = 3/146 (2%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  AL+EAQ A + +E+P+GAV V + KII R  N     +D T HAE+LAI   C  L
Sbjct: 12  YMGEALKEAQFAKMIDEVPIGAVVVHDGKIIGRGHNLREHSQDATTHAEVLAITEACAYL 71

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  L+VT+EPC MC+  I  ++I  +Y+GA + K G + +          +H  
Sbjct: 72  RSWRLWDCQLFVTIEPCLMCSGTIINSQIPEVYFGARDSKAGAVRSLYTVLEDQRLNHQV 131

Query: 127 EIYPGISEQRSRQIIQDFFK---ERR 149
           E+  G++  ++  +++ FFK   ERR
Sbjct: 132 EVREGVAADQAAGLMKSFFKAIRERR 157


>gi|209527530|ref|ZP_03276032.1| CMP/dCMP deaminase zinc-binding [Arthrospira maxima CS-328]
 gi|209492018|gb|EDZ92371.1| CMP/dCMP deaminase zinc-binding [Arthrospira maxima CS-328]
          Length = 157

 Score =  100 bits (250), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 59/144 (40%), Positives = 76/144 (52%), Gaps = 1/144 (0%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           +M  AL+    A    E+PVGAV V    K+I++  NR    +D TAHAEI+A+R   ++
Sbjct: 11  WMRQALKLGAAAGEAGEVPVGAVIVNQQGKLIAQGENRRERDRDPTAHAEIIALRQASQV 70

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           L    L    LYVTLEPC MCA AI  ARI  L YGA +PK G I            +H 
Sbjct: 71  LGDWHLDTCTLYVTLEPCPMCAGAIIQARIGLLVYGADDPKTGSIRTVFNLPDSPASYHR 130

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
             +  GI E   RQ +Q +F + R
Sbjct: 131 LPVLGGILESSCRQQLQSWFAQHR 154


>gi|90108580|pdb|1Z3A|A Chain A, Crystal Structure Of Trna Adenosine Deaminase Tada From
           Escherichia Coli
 gi|90108581|pdb|1Z3A|B Chain B, Crystal Structure Of Trna Adenosine Deaminase Tada From
           Escherichia Coli
          Length = 168

 Score =  100 bits (250), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 57/143 (39%), Positives = 77/143 (53%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  AL  A+ A    E+PVGAV V NN++I    NR     D TAHAEI+A+R G  ++
Sbjct: 12  WMRHALTLAKRAWDEREVPVGAVLVHNNRVIGEGWNRPIGRHDPTAHAEIMALRQGGLVM 71

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  LYVTLEPC MCA A+  +RI R+ +GA + K G   +          +H  
Sbjct: 72  QNYRLIDATLYVTLEPCVMCAGAMIHSRIGRVVFGARDAKTGAAGSLMDVLHHPGMNHRV 131

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           EI  GI       ++ DFF+ RR
Sbjct: 132 EITEGILADECAALLSDFFRMRR 154


>gi|218929978|ref|YP_002347853.1| tRNA-specific adenosine deaminase [Yersinia pestis CO92]
 gi|115348589|emb|CAL21531.1| putative zinc-binding protein [Yersinia pestis CO92]
          Length = 159

 Score =  100 bits (250), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 59/142 (41%), Positives = 76/142 (53%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  AL  A  A    E+PVGAV VL NK+I    NR     D TAHAEI+A+R G + + 
Sbjct: 1   MRHALTLALRAQEEGEVPVGAVLVLGNKVIGEGWNRPIRDNDPTAHAEIMALRQGGQAVQ 60

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
              L +  LYVTLEPC MCA A+  +RIRRL YGA++ K G   +          +H  E
Sbjct: 61  NYRLLDATLYVTLEPCVMCAGAMVHSRIRRLVYGANDVKTGAAGSLVDILRHPGMNHQIE 120

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
           +  GI        +  FF++RR
Sbjct: 121 VSAGILAIACSHQLSAFFRQRR 142


>gi|150019816|ref|YP_001312070.1| CMP/dCMP deaminase, zinc-binding [Clostridium beijerinckii NCIMB
           8052]
 gi|149906281|gb|ABR37114.1| CMP/dCMP deaminase, zinc-binding [Clostridium beijerinckii NCIMB
           8052]
          Length = 149

 Score =  100 bits (250), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 59/146 (40%), Positives = 82/146 (56%), Gaps = 7/146 (4%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           F+  A EEA+ A  + EIPVGAV VL++KII RA N    L D TAHAEILAI+   + +
Sbjct: 4   FLKIAKEEAKMAMKKGEIPVGAVIVLDDKIIGRAHNLKETLNDSTAHAEILAIKEASKFI 63

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG---IENGTQFYTLATCH 123
               L   ++YVTLEPC MCA AI  +RI ++Y G  N   G    + + T    L +  
Sbjct: 64  GDWRLNRAEMYVTLEPCPMCAGAIIQSRISKVYIGTFNKDMGACGSVIDVTDNKWLNSFV 123

Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149
            +  +Y    ++    I+ +FF +RR
Sbjct: 124 STKWLY----DKECSDIMLEFFCQRR 145


>gi|313812411|gb|EFS50125.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Propionibacterium acnes HL025PA1]
 gi|327334354|gb|EGE76065.1| tRNA-specific adenosine deaminase [Propionibacterium acnes
           HL097PA1]
          Length = 149

 Score =  100 bits (250), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 54/143 (37%), Positives = 79/143 (55%), Gaps = 1/143 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M+ AL+ A+ AA   ++P+GAV +  N +++S AGN      D TAHAE+LAIR      
Sbjct: 1   MTQALDVARRAATWGDVPIGAVILGANGEVLSEAGNERERTGDPTAHAEVLAIRRAAEAR 60

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  L VTLEPCTMCA  I  ARI R+ +GA +PK G + +           H P
Sbjct: 61  DGWRLGDCTLVVTLEPCTMCAGTIVAARIPRVVFGAFDPKAGAVSSLFDVMRDPRLPHRP 120

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           ++  G+  + S  ++++FF   R
Sbjct: 121 KVVTGVMAEESSALLREFFDGHR 143


>gi|331086590|ref|ZP_08335668.1| hypothetical protein HMPREF0987_01971 [Lachnospiraceae bacterium
           9_1_43BFAA]
 gi|330410423|gb|EGG89855.1| hypothetical protein HMPREF0987_01971 [Lachnospiraceae bacterium
           9_1_43BFAA]
          Length = 163

 Score =  100 bits (250), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 51/149 (34%), Positives = 83/149 (55%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M +   +M  A+ +A+ A    E+P+G V V  +KII+R  NR    K+  AHAE++AI+
Sbjct: 1   MNQDEKYMKEAIRQAKKAYALKEVPIGCVIVYQDKIIARGYNRRTIDKNTLAHAELIAIK 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              R +    L +  +YVTLEPC MC+ AI  +R++++  G  NPK G   +      + 
Sbjct: 61  KASRKMDDWRLEDCTMYVTLEPCQMCSGAIVQSRMKKVVVGCMNPKAGCAGSIFNLLQVP 120

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  E+  G+ E+   Q+++ FF+E R
Sbjct: 121 QFNHQVELEIGVLEEECSQLMKSFFRELR 149


>gi|326575668|gb|EGE25591.1| tRNA-specific adenosine deaminase [Moraxella catarrhalis CO72]
          Length = 181

 Score =  100 bits (249), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 57/143 (39%), Positives = 80/143 (55%), Gaps = 1/143 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M+ ALE A+  A   EIPVGAV V   +I+    N     +D TAHAEI+A+R  C  L+
Sbjct: 29  MNRALEIAKQGAKFGEIPVGAVVVYEGRILGEGYNCPITTQDPTAHAEIVAVRRACETLN 88

Query: 68  QEILPE-VDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
              LP+   LYVTLEPCTMC   +  ARI R+ +GA  PK G + +  +       +H  
Sbjct: 89  NYRLPKGCILYVTLEPCTMCFGTLIHARISRVVFGAFEPKAGVVVSQLKLPEQVFYNHHL 148

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
            +Y G+   +S  ++  FF++RR
Sbjct: 149 SVYGGLLADKSSALLSGFFRQRR 171


>gi|110806489|ref|YP_690009.1| tRNA-specific adenosine deaminase [Shigella flexneri 5 str. 8401]
 gi|110616037|gb|ABF04704.1| putative deaminase [Shigella flexneri 5 str. 8401]
          Length = 167

 Score =  100 bits (249), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 57/143 (39%), Positives = 77/143 (53%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  AL  A+ A    E+PVGAV V NN++I    NR     D TAHAEI+A+R G  ++
Sbjct: 11  WMRHALTLAKRAWDEREVPVGAVLVHNNRVIGEGWNRPIGRHDPTAHAEIMALRQGGLVM 70

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  LYVTLEPC MCA A+  +RI R+ +GA + K G   +          +H  
Sbjct: 71  QNYRLIDATLYVTLEPCVMCAGAMLHSRIGRVVFGARDAKTGAAGSLMDVLHHPGMNHRV 130

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           EI  GI       ++ DFF+ RR
Sbjct: 131 EITEGILADECAALLSDFFRMRR 153


>gi|320539250|ref|ZP_08038920.1| putative cytidine and deoxycytidylate deaminase zinc-binding
           protein [Serratia symbiotica str. Tucson]
 gi|320030642|gb|EFW12651.1| putative cytidine and deoxycytidylate deaminase zinc-binding
           protein [Serratia symbiotica str. Tucson]
          Length = 170

 Score =  100 bits (249), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 57/143 (39%), Positives = 76/143 (53%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  AL  A  A    E+PVGA+ VL+N++I    NR     D TAHAEI+A+R G  +L
Sbjct: 10  WMCQALRLALRAQEEGEVPVGALLVLDNQVIGEGWNRPIGRHDPTAHAEIMALRQGGAVL 69

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L    LYVTLEPC MCA A+  +RIRRL YG ++ K G   +          +H  
Sbjct: 70  QNYRLLNATLYVTLEPCVMCAGAMVHSRIRRLVYGTADEKTGAAGSLMDILRHPGMNHQV 129

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           EI  G+       ++  FF+ RR
Sbjct: 130 EIASGVLADECAAMLSHFFRLRR 152


>gi|260598940|ref|YP_003211511.1| tRNA-specific adenosine deaminase [Cronobacter turicensis z3032]
 gi|260218117|emb|CBA32906.1| tRNA-specific adenosine deaminase [Cronobacter turicensis z3032]
          Length = 196

 Score =  100 bits (249), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 56/143 (39%), Positives = 76/143 (53%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  AL  AQ A    E+PVGAV V NN++I    NR     D TAHAEI+A+R G  +L
Sbjct: 34  WMRHALTLAQRAWDEGEVPVGAVLVHNNQVIGEGWNRPIGRHDPTAHAEIMALRQGGLVL 93

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  LYVTLEPC MCA A+   RI  L +GA + K G + +          +H  
Sbjct: 94  QNYRLLDTTLYVTLEPCVMCAGAMVHGRIGTLVFGARDAKTGAVGSLMDITGHPGMNHQV 153

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           ++  GI       ++  FF++RR
Sbjct: 154 QVIEGILATECSAMLSAFFRQRR 176


>gi|24113886|ref|NP_708396.1| tRNA-specific adenosine deaminase [Shigella flexneri 2a str. 301]
 gi|30063946|ref|NP_838117.1| tRNA-specific adenosine deaminase [Shigella flexneri 2a str. 2457T]
 gi|82545011|ref|YP_408958.1| tRNA-specific adenosine deaminase [Shigella boydii Sb227]
 gi|89109365|ref|AP_003145.1| tRNA-specific adenosine deaminase [Escherichia coli str. K-12
           substr. W3110]
 gi|157162036|ref|YP_001459354.1| tRNA-specific adenosine deaminase [Escherichia coli HS]
 gi|187730453|ref|YP_001881338.1| tRNA-specific adenosine deaminase [Shigella boydii CDC 3083-94]
 gi|188496019|ref|ZP_03003289.1| tRNA-specific adenosine deaminase [Escherichia coli 53638]
 gi|209920038|ref|YP_002294122.1| tRNA-specific adenosine deaminase [Escherichia coli SE11]
 gi|218547914|ref|YP_002381705.1| tRNA-specific adenosine deaminase [Escherichia fergusonii ATCC
           35469]
 gi|218555084|ref|YP_002387997.1| tRNA-specific adenosine deaminase [Escherichia coli IAI1]
 gi|218696186|ref|YP_002403853.1| tRNA-specific adenosine deaminase [Escherichia coli 55989]
 gi|254162534|ref|YP_003045642.1| tRNA-specific adenosine deaminase [Escherichia coli B str. REL606]
 gi|256017292|ref|ZP_05431157.1| tRNA-specific adenosine deaminase [Shigella sp. D9]
 gi|293410974|ref|ZP_06654550.1| tRNA-specific adenosine deaminase [Escherichia coli B354]
 gi|300817664|ref|ZP_07097879.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Escherichia coli MS 107-1]
 gi|300820763|ref|ZP_07100913.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Escherichia coli MS 119-7]
 gi|300904258|ref|ZP_07122117.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Escherichia coli MS 84-1]
 gi|300920727|ref|ZP_07137133.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Escherichia coli MS 115-1]
 gi|300927064|ref|ZP_07142816.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Escherichia coli MS 182-1]
 gi|300927685|ref|ZP_07143253.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Escherichia coli MS 187-1]
 gi|300951723|ref|ZP_07165542.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Escherichia coli MS 116-1]
 gi|300958800|ref|ZP_07170912.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Escherichia coli MS 175-1]
 gi|301022068|ref|ZP_07185995.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Escherichia coli MS 196-1]
 gi|301024846|ref|ZP_07188483.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Escherichia coli MS 69-1]
 gi|301302925|ref|ZP_07209053.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Escherichia coli MS 124-1]
 gi|301330339|ref|ZP_07222986.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Escherichia coli MS 78-1]
 gi|301648323|ref|ZP_07248063.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Escherichia coli MS 146-1]
 gi|312973195|ref|ZP_07787367.1| tRNA-specific adenosine deaminase [Escherichia coli 1827-70]
 gi|331643182|ref|ZP_08344317.1| tRNA-specific adenosine deaminase [Escherichia coli H736]
 gi|331664126|ref|ZP_08365036.1| tRNA-specific adenosine deaminase [Escherichia coli TA143]
 gi|331669308|ref|ZP_08370156.1| tRNA-specific adenosine deaminase [Escherichia coli TA271]
 gi|331678554|ref|ZP_08379229.1| tRNA-specific adenosine deaminase [Escherichia coli H591]
 gi|331684208|ref|ZP_08384804.1| tRNA-specific adenosine deaminase [Escherichia coli H299]
 gi|332278286|ref|ZP_08390699.1| tRNA-specific adenosine deaminase [Shigella sp. D9]
 gi|296183|emb|CAA51064.1| unnamed protein product [Escherichia coli]
 gi|987637|dbj|BAA10909.1| YFHC-ECOLI protein [Escherichia coli K-12]
 gi|1033148|gb|AAA79821.1| alternate name yfhC; orf178 of GenBank Accession Number X72336
           [Escherichia coli str. K-12 substr. MG1655]
 gi|24052985|gb|AAN44103.1| putative deaminase [Shigella flexneri 2a str. 301]
 gi|30042202|gb|AAP17927.1| putative deaminase [Shigella flexneri 2a str. 2457T]
 gi|81246422|gb|ABB67130.1| putative deaminase [Shigella boydii Sb227]
 gi|85675450|dbj|BAE76735.1| tRNA-specific adenosine deaminase [Escherichia coli str. K12
           substr. W3110]
 gi|157067716|gb|ABV06971.1| tRNA-specific adenosine deaminase [Escherichia coli HS]
 gi|187427445|gb|ACD06719.1| tRNA-specific adenosine deaminase [Shigella boydii CDC 3083-94]
 gi|188491218|gb|EDU66321.1| tRNA-specific adenosine deaminase [Escherichia coli 53638]
 gi|209913297|dbj|BAG78371.1| putative deaminase [Escherichia coli SE11]
 gi|218352918|emb|CAU98717.1| tRNA-specific adenosine deaminase [Escherichia coli 55989]
 gi|218355455|emb|CAQ88064.1| tRNA-specific adenosine deaminase [Escherichia fergusonii ATCC
           35469]
 gi|218361852|emb|CAQ99452.1| tRNA-specific adenosine deaminase [Escherichia coli IAI1]
 gi|253974435|gb|ACT40106.1| tRNA-specific adenosine deaminase [Escherichia coli B str. REL606]
 gi|253978602|gb|ACT44272.1| tRNA-specific adenosine deaminase [Escherichia coli BL21(DE3)]
 gi|281601959|gb|ADA74943.1| tRNA-specific adenosine deaminase [Shigella flexneri 2002017]
 gi|291471442|gb|EFF13926.1| tRNA-specific adenosine deaminase [Escherichia coli B354]
 gi|299881373|gb|EFI89584.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Escherichia coli MS 196-1]
 gi|300314548|gb|EFJ64332.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Escherichia coli MS 175-1]
 gi|300396377|gb|EFJ79915.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Escherichia coli MS 69-1]
 gi|300403791|gb|EFJ87329.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Escherichia coli MS 84-1]
 gi|300412298|gb|EFJ95608.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Escherichia coli MS 115-1]
 gi|300416948|gb|EFK00259.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Escherichia coli MS 182-1]
 gi|300449007|gb|EFK12627.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Escherichia coli MS 116-1]
 gi|300464238|gb|EFK27731.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Escherichia coli MS 187-1]
 gi|300526516|gb|EFK47585.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Escherichia coli MS 119-7]
 gi|300529652|gb|EFK50714.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Escherichia coli MS 107-1]
 gi|300841860|gb|EFK69620.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Escherichia coli MS 124-1]
 gi|300843673|gb|EFK71433.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Escherichia coli MS 78-1]
 gi|301073599|gb|EFK88405.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Escherichia coli MS 146-1]
 gi|309702891|emb|CBJ02222.1| tRNA-specific adenosine deaminase [Escherichia coli ETEC H10407]
 gi|310331790|gb|EFP99025.1| tRNA-specific adenosine deaminase [Escherichia coli 1827-70]
 gi|315137183|dbj|BAJ44342.1| tRNA-specific adenosine deaminase [Escherichia coli DH1]
 gi|315256586|gb|EFU36554.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Escherichia coli MS 85-1]
 gi|315615821|gb|EFU96453.1| tRNA-specific adenosine deaminase [Escherichia coli 3431]
 gi|320196395|gb|EFW71019.1| tRNA-specific adenosine-34 deaminase [Escherichia coli WV_060327]
 gi|323156217|gb|EFZ42376.1| tRNA-specific adenosine deaminase [Escherichia coli EPECa14]
 gi|323170158|gb|EFZ55811.1| tRNA-specific adenosine deaminase [Escherichia coli LT-68]
 gi|323177311|gb|EFZ62899.1| tRNA-specific adenosine deaminase [Escherichia coli 1180]
 gi|323184561|gb|EFZ69935.1| tRNA-specific adenosine deaminase [Escherichia coli 1357]
 gi|324020017|gb|EGB89236.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Escherichia coli MS 117-3]
 gi|325496361|gb|EGC94220.1| tRNA-specific adenosine deaminase [Escherichia fergusonii ECD227]
 gi|331039980|gb|EGI12200.1| tRNA-specific adenosine deaminase [Escherichia coli H736]
 gi|331059925|gb|EGI31902.1| tRNA-specific adenosine deaminase [Escherichia coli TA143]
 gi|331064502|gb|EGI36413.1| tRNA-specific adenosine deaminase [Escherichia coli TA271]
 gi|331075014|gb|EGI46334.1| tRNA-specific adenosine deaminase [Escherichia coli H591]
 gi|331079160|gb|EGI50362.1| tRNA-specific adenosine deaminase [Escherichia coli H299]
 gi|332100638|gb|EGJ03984.1| tRNA-specific adenosine deaminase [Shigella sp. D9]
 gi|333000545|gb|EGK20124.1| tRNA-specific adenosine deaminase [Shigella flexneri VA-6]
          Length = 178

 Score =  100 bits (249), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 57/143 (39%), Positives = 77/143 (53%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  AL  A+ A    E+PVGAV V NN++I    NR     D TAHAEI+A+R G  ++
Sbjct: 22  WMRHALTLAKRAWDEREVPVGAVLVHNNRVIGEGWNRPIGRHDPTAHAEIMALRQGGLVM 81

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  LYVTLEPC MCA A+  +RI R+ +GA + K G   +          +H  
Sbjct: 82  QNYRLIDATLYVTLEPCVMCAGAMIHSRIGRVVFGARDAKTGAAGSLMDVLHHPGMNHRV 141

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           EI  GI       ++ DFF+ RR
Sbjct: 142 EITEGILADECAALLSDFFRMRR 164


>gi|282897517|ref|ZP_06305518.1| Cytidine/deoxycytidylate deaminase, zinc-binding region protein
           [Raphidiopsis brookii D9]
 gi|281197612|gb|EFA72507.1| Cytidine/deoxycytidylate deaminase, zinc-binding region protein
           [Raphidiopsis brookii D9]
          Length = 185

 Score =  100 bits (249), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 60/144 (41%), Positives = 78/144 (54%), Gaps = 1/144 (0%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           +MS AL+ AQ A    E+PVG + V     +I +  NR +  +D TAHAEI+AIR   R 
Sbjct: 20  WMSEALKLAQIAGDAGEVPVGCIIVNSQGDLIGQGENRKQRDQDPTAHAEIVAIRSAART 79

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           L    L +  LYVTLEPC MCA AI  AR++ L Y   +PK G I       +    +H 
Sbjct: 80  LQNWHLDQCTLYVTLEPCPMCAGAIIHARLQTLVYAVDDPKTGAIRTVINIPSSPASNHR 139

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
             I  GI E  SRQ +Q +F  +R
Sbjct: 140 LRIIGGILESASRQQLQSWFVYQR 163


>gi|289450534|ref|YP_003475019.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Clostridiales genomosp. BVAB3 str. UPII9-5]
 gi|289185081|gb|ADC91506.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Clostridiales genomosp. BVAB3 str. UPII9-5]
          Length = 149

 Score =  100 bits (249), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 55/142 (38%), Positives = 75/142 (52%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  AL +A  +  + E P+GAV V   +I++   N  +    +T HAEI AI    R L 
Sbjct: 1   MRRALHQAALSERKGEAPIGAVIVYQGRIVAHGRNSRQNSNLITGHAEISAILQAERKLK 60

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
              LPE D+YVTLEPC MCA AI  ARIR +Y+GAS+PKGG + +    + L   +H   
Sbjct: 61  SWRLPECDIYVTLEPCIMCAGAIQQARIRHVYFGASDPKGGAVVSCGNIFDLPGLNHHVG 120

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
               I        + +FF+  R
Sbjct: 121 YTGAILADECSTALSNFFRNLR 142


>gi|298207416|ref|YP_003715595.1| putative cytosine/adenosine deaminase [Croceibacter atlanticus
           HTCC2559]
 gi|83850052|gb|EAP87920.1| putative cytosine/adenosine deaminase [Croceibacter atlanticus
           HTCC2559]
          Length = 149

 Score =  100 bits (249), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 55/143 (38%), Positives = 81/143 (56%), Gaps = 6/143 (4%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  AL EA+ A  + EIPVGA+ V NN II+R+ N    L DVTAHAE+  I      +
Sbjct: 10  FMKKALLEAEEAYEKGEIPVGAIVVANNTIIARSHNLTELLNDVTAHAEMQVITSAANHI 69

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
             + L +  LYVTLEPC MCA A+  ++I ++ +GA + + G    GT+       H   
Sbjct: 70  GGKYLTDCTLYVTLEPCQMCAGALYWSQISKIVFGAEDTQRGYRVMGTKL------HPKT 123

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           ++  G+  + +  +++ FF ERR
Sbjct: 124 KVVSGVLAEDASLLLKRFFIERR 146


>gi|322376101|ref|ZP_08050611.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus
           sp. C300]
 gi|321279051|gb|EFX56094.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus
           sp. C300]
          Length = 155

 Score =  100 bits (249), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 59/149 (39%), Positives = 79/149 (53%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +++   FM  AL EA+ A   +EIP+G V V + +II R  N   EL+    HAEI+AI 
Sbjct: 5   VEEKEAFMREALREAEIALEHDEIPIGCVIVKDGEIIGRGHNAREELQRAVMHAEIMAIE 64

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
                     L +  L+VT+EPC MC+ AI LARI  + YGA N K G   +     T  
Sbjct: 65  NANVSEESWRLLDCTLFVTIEPCVMCSGAIGLARIPNVVYGAKNQKFGAAGSLYDILTDE 124

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  E+  GI E     I+QDFF+ RR
Sbjct: 125 RLNHRVEVEAGILEDDCAAIMQDFFRNRR 153


>gi|170767485|ref|ZP_02901938.1| tRNA-specific adenosine deaminase [Escherichia albertii TW07627]
 gi|170123819|gb|EDS92750.1| tRNA-specific adenosine deaminase [Escherichia albertii TW07627]
          Length = 178

 Score =  100 bits (249), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 57/143 (39%), Positives = 77/143 (53%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  AL  A+ A    E+PVGAV V NN++I    NR     D TAHAEI+A+R G  ++
Sbjct: 22  WMRHALTLAKRAWDEREVPVGAVLVHNNRVIGEGWNRPIGRHDPTAHAEIMALRQGGLVM 81

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  LYVTLEPC MCA A+  +RI R+ +GA + K G   +          +H  
Sbjct: 82  QNYRLIDATLYVTLEPCVMCAGAMIHSRIGRVVFGARDAKTGAAGSLMDVLHHPGMNHRV 141

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           EI  GI       ++ DFF+ RR
Sbjct: 142 EITEGILADECAALLSDFFRMRR 164


>gi|74313082|ref|YP_311501.1| tRNA-specific adenosine deaminase [Shigella sonnei Ss046]
 gi|73856559|gb|AAZ89266.1| putative deaminase [Shigella sonnei Ss046]
 gi|323169455|gb|EFZ55128.1| tRNA-specific adenosine deaminase [Shigella sonnei 53G]
          Length = 178

 Score =  100 bits (249), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 57/143 (39%), Positives = 77/143 (53%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  AL  A+ A    E+PVGAV V NN++I    NR     D TAHAEI+A+R G  ++
Sbjct: 22  WMRHALTLAKRAWDEREVPVGAVLVHNNRVIGEGWNRPIGRHDPTAHAEIMALRQGGLVM 81

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  LYVTLEPC MCA A+  +RI R+ +GA + K G   +          +H  
Sbjct: 82  QNYRLIDATLYVTLEPCVMCAGAMIHSRIGRVVFGARDAKTGAAGSLMDVLHHPGMNHRV 141

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           EI  GI       ++ DFF+ RR
Sbjct: 142 EITEGILADECAALLSDFFRMRR 164


>gi|293364574|ref|ZP_06611295.1| tRNA-specific adenosine deaminase [Streptococcus oralis ATCC 35037]
 gi|307702826|ref|ZP_07639774.1| tRNA-specific adenosine deaminase [Streptococcus oralis ATCC 35037]
 gi|291316832|gb|EFE57264.1| tRNA-specific adenosine deaminase [Streptococcus oralis ATCC 35037]
 gi|307623506|gb|EFO02495.1| tRNA-specific adenosine deaminase [Streptococcus oralis ATCC 35037]
          Length = 155

 Score =  100 bits (249), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 59/149 (39%), Positives = 79/149 (53%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +++   FM  AL EA+ A   +EIP+G V V + +II R  N   EL+    HAEI+AI 
Sbjct: 5   VEEKEAFMREALREAEIALEHDEIPIGCVIVKDGEIIGRGHNAREELQRAVMHAEIMAIE 64

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
                     L +  L+VT+EPC MC+ AI LARI  + YGA N K G   +     T  
Sbjct: 65  NANVSEESWRLLDCTLFVTIEPCVMCSGAIGLARIPNVVYGAKNQKFGAAGSLYDILTDE 124

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  E+  GI E     I+QDFF+ RR
Sbjct: 125 RLNHRVEVETGILEDDCAAIMQDFFRNRR 153


>gi|145698301|ref|NP_417054.2| tRNA-specific adenosine deaminase [Escherichia coli str. K-12
           substr. MG1655]
 gi|170082169|ref|YP_001731489.1| tRNA-specific adenosine deaminase [Escherichia coli str. K-12
           substr. DH10B]
 gi|170682913|ref|YP_001744748.1| tRNA-specific adenosine deaminase [Escherichia coli SMS-3-5]
 gi|191167978|ref|ZP_03029780.1| tRNA-specific adenosine deaminase [Escherichia coli B7A]
 gi|194437606|ref|ZP_03069702.1| tRNA-specific adenosine deaminase [Escherichia coli 101-1]
 gi|238901724|ref|YP_002927520.1| tRNA-specific adenosine deaminase [Escherichia coli BW2952]
 gi|253772543|ref|YP_003035374.1| tRNA-specific adenosine deaminase [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|256021756|ref|ZP_05435621.1| tRNA-specific adenosine deaminase [Escherichia sp. 4_1_40B]
 gi|260856653|ref|YP_003230544.1| tRNA-specific adenosine deaminase [Escherichia coli O26:H11 str.
           11368]
 gi|260869246|ref|YP_003235648.1| tRNA-specific adenosine deaminase [Escherichia coli O111:H- str.
           11128]
 gi|297516926|ref|ZP_06935312.1| tRNA-specific adenosine deaminase [Escherichia coli OP50]
 gi|307139195|ref|ZP_07498551.1| tRNA-specific adenosine deaminase [Escherichia coli H736]
 gi|307313870|ref|ZP_07593486.1| CMP/dCMP deaminase zinc-binding [Escherichia coli W]
 gi|150421688|sp|P68398|TADA_ECOLI RecName: Full=tRNA-specific adenosine deaminase
 gi|150421691|sp|P68397|TADA_SHIFL RecName: Full=tRNA-specific adenosine deaminase
 gi|145693172|gb|AAC75612.2| tRNA-specific adenosine deaminase [Escherichia coli str. K-12
           substr. MG1655]
 gi|169890004|gb|ACB03711.1| tRNA-specific adenosine deaminase [Escherichia coli str. K-12
           substr. DH10B]
 gi|170520631|gb|ACB18809.1| tRNA-specific adenosine deaminase [Escherichia coli SMS-3-5]
 gi|190901985|gb|EDV61732.1| tRNA-specific adenosine deaminase [Escherichia coli B7A]
 gi|194423412|gb|EDX39403.1| tRNA-specific adenosine deaminase [Escherichia coli 101-1]
 gi|238863717|gb|ACR65715.1| tRNA-specific adenosine deaminase [Escherichia coli BW2952]
 gi|253323587|gb|ACT28189.1| CMP/dCMP deaminase zinc-binding [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|257755302|dbj|BAI26804.1| tRNA-specific adenosine deaminase [Escherichia coli O26:H11 str.
           11368]
 gi|257765602|dbj|BAI37097.1| tRNA-specific adenosine deaminase [Escherichia coli O111:H- str.
           11128]
 gi|260448361|gb|ACX38783.1| CMP/dCMP deaminase zinc-binding protein [Escherichia coli DH1]
 gi|306906371|gb|EFN36886.1| CMP/dCMP deaminase zinc-binding [Escherichia coli W]
 gi|313651052|gb|EFS15452.1| tRNA-specific adenosine deaminase [Shigella flexneri 2a str. 2457T]
 gi|313848716|emb|CAQ32934.2| tRNA-specific adenosine deaminase monomer, subunit of tRNA-specific
           adenosine deaminase [Escherichia coli BL21(DE3)]
 gi|315061878|gb|ADT76205.1| tRNA-specific adenosine deaminase [Escherichia coli W]
 gi|320186358|gb|EFW61092.1| tRNA-specific adenosine-34 deaminase [Shigella flexneri CDC 796-83]
 gi|320200123|gb|EFW74712.1| tRNA-specific adenosine-34 deaminase [Escherichia coli EC4100B]
 gi|323377541|gb|ADX49809.1| CMP/dCMP deaminase zinc-binding protein [Escherichia coli KO11]
 gi|323936299|gb|EGB32590.1| cytidine and deoxycytidylate deaminase zinc-binding protein
           [Escherichia coli E1520]
 gi|323941178|gb|EGB37363.1| cytidine and deoxycytidylate deaminase zinc-binding protein
           [Escherichia coli E482]
 gi|323944616|gb|EGB40684.1| cytidine and deoxycytidylate deaminase zinc-binding protein
           [Escherichia coli H120]
 gi|323961174|gb|EGB56787.1| cytidine and deoxycytidylate deaminase zinc-binding protein
           [Escherichia coli H489]
 gi|323971115|gb|EGB66362.1| cytidine and deoxycytidylate deaminase zinc-binding protein
           [Escherichia coli TA007]
 gi|324113086|gb|EGC07062.1| cytidine and deoxycytidylate deaminase zinc-binding protein
           [Escherichia fergusonii B253]
 gi|324118231|gb|EGC12127.1| cytidine and deoxycytidylate deaminase zinc-binding protein
           [Escherichia coli E1167]
 gi|332092598|gb|EGI97670.1| tRNA-specific adenosine deaminase [Shigella boydii 3594-74]
 gi|332344434|gb|AEE57768.1| tRNA-specific adenosine deaminase [Escherichia coli UMNK88]
 gi|332756134|gb|EGJ86485.1| tRNA-specific adenosine deaminase [Shigella flexneri 2747-71]
 gi|332765914|gb|EGJ96125.1| tRNA-specific adenosine deaminase monomer [Shigella flexneri
           2930-71]
 gi|333002351|gb|EGK21915.1| tRNA-specific adenosine deaminase [Shigella flexneri K-272]
 gi|333016173|gb|EGK35505.1| tRNA-specific adenosine deaminase [Shigella flexneri K-227]
 gi|333016472|gb|EGK35803.1| tRNA-specific adenosine deaminase [Shigella flexneri K-304]
          Length = 167

 Score =  100 bits (249), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 57/143 (39%), Positives = 77/143 (53%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  AL  A+ A    E+PVGAV V NN++I    NR     D TAHAEI+A+R G  ++
Sbjct: 11  WMRHALTLAKRAWDEREVPVGAVLVHNNRVIGEGWNRPIGRHDPTAHAEIMALRQGGLVM 70

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  LYVTLEPC MCA A+  +RI R+ +GA + K G   +          +H  
Sbjct: 71  QNYRLIDATLYVTLEPCVMCAGAMIHSRIGRVVFGARDAKTGAAGSLMDVLHHPGMNHRV 130

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           EI  GI       ++ DFF+ RR
Sbjct: 131 EITEGILADECAALLSDFFRMRR 153


>gi|296875658|ref|ZP_06899727.1| possible cytosine deaminase [Streptococcus parasanguinis ATCC
           15912]
 gi|322390383|ref|ZP_08063906.1| tRNA-specific adenosine deaminase [Streptococcus parasanguinis ATCC
           903]
 gi|296433342|gb|EFH19120.1| possible cytosine deaminase [Streptococcus parasanguinis ATCC
           15912]
 gi|321142924|gb|EFX38379.1| tRNA-specific adenosine deaminase [Streptococcus parasanguinis ATCC
           903]
          Length = 180

 Score =  100 bits (249), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 60/146 (41%), Positives = 85/146 (58%), Gaps = 4/146 (2%)

Query: 6   VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           +FM  AL+EA+ A   +EIP+G V V + +II R  N   EL+    HAEI+AI    + 
Sbjct: 21  MFMREALKEAEIALANDEIPIGCVLVKDGQIIGRGHNAREELQRAVMHAEIMAIEEANQR 80

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT--CH 123
            +   L +  L+VT+EPC MC+ AI LARI ++ YGA+N K GG   G+ +  LA    +
Sbjct: 81  ENSWRLLDTTLFVTIEPCVMCSGAIGLARIPQVIYGATNQKFGGA--GSLYDILADERLN 138

Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149
           H  E+  GI E     I+Q FF++ R
Sbjct: 139 HRVEVETGILEAECAAIMQTFFRQGR 164


>gi|271501609|ref|YP_003334635.1| CMP/dCMP deaminase zinc-binding protein [Dickeya dadantii Ech586]
 gi|270345164|gb|ACZ77929.1| CMP/dCMP deaminase zinc-binding protein [Dickeya dadantii Ech586]
          Length = 170

 Score =  100 bits (249), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 55/143 (38%), Positives = 78/143 (54%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  AL  AQ A    E+PVGAV V  +++I    NR     D TAHAEI+A++ G ++L
Sbjct: 10  WMRHALSLAQRAWDEGEVPVGAVLVQGDRVIGEGWNRPIGRHDPTAHAEIMALQQGGQVL 69

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  LY+TLEPC MCA A+  +RI RL YGA++ K G   +          +H  
Sbjct: 70  QNYRLLDTTLYITLEPCVMCAGAMIHSRITRLVYGAADAKTGAAGSLVDILRHPGMNHQI 129

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
            I  G+  Q   +++  FF+ RR
Sbjct: 130 AITDGVLAQECSELLSRFFRMRR 152


>gi|251772814|gb|EES53374.1| putative zinc-binding cytidine/deoxycytidylate deaminase
           [Leptospirillum ferrodiazotrophum]
          Length = 158

 Score =  100 bits (249), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 54/143 (37%), Positives = 83/143 (58%), Gaps = 1/143 (0%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM+ AL  A+N  + +++PVGA+ V+  +I+    N+ R   D TAHAEI+A+R     L
Sbjct: 15  FMNKALNLARNGIV-DDVPVGAIVVVGGEIVGEGVNQGRASHDPTAHAEIIALRRAAARL 73

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               LP   LYVTLEPC MC  A+   RI RL +GA +PK G   +    +      H  
Sbjct: 74  ENYRLPLSTLYVTLEPCLMCLGAMMEGRIHRLVFGARDPKRGVAGSLYDLHNDPRFTHRI 133

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           ++  G+ E+ SR++++ FF+++R
Sbjct: 134 KVESGLCEEESRELLRQFFEKKR 156


>gi|306826204|ref|ZP_07459538.1| tRNA-specific adenosine deaminase [Streptococcus sp. oral taxon 071
           str. 73H25AP]
 gi|304431480|gb|EFM34462.1| tRNA-specific adenosine deaminase [Streptococcus sp. oral taxon 071
           str. 73H25AP]
          Length = 155

 Score =  100 bits (249), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 59/149 (39%), Positives = 79/149 (53%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +++   FM  AL EA+ A   +EIP+G V V + +II R  N   EL+    HAEI+AI 
Sbjct: 5   VEEKEAFMREALREAEIALEHDEIPIGCVIVKDREIIGRGHNAREELQRAVMHAEIMAIE 64

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
                     L +  L+VT+EPC MC+ AI LARI  + YGA N K G   +     T  
Sbjct: 65  NANVSEESWRLLDCTLFVTIEPCVMCSGAIGLARIPNVVYGAKNQKFGAAGSLYDILTDE 124

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  E+  GI E     I+QDFF+ RR
Sbjct: 125 RLNHRVEVETGILEDDCAAIMQDFFRNRR 153


>gi|108758559|ref|YP_630178.1| cytidine and deoxycytidylate deaminase zinc-binding
           domain-containing protein [Myxococcus xanthus DK 1622]
 gi|108462439|gb|ABF87624.1| cytidine and deoxycytidylate deaminase zinc-binding domain protein
           [Myxococcus xanthus DK 1622]
          Length = 154

 Score =  100 bits (249), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 55/143 (38%), Positives = 78/143 (54%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  AL  A+ AA   E+PVGAVAVLN +++    NR    ++  AHAE+LA+    R +
Sbjct: 6   FMQQALSLAREAAELGEVPVGAVAVLNGEVVGAGFNRREVDRNPLAHAEMLAMDAAARKI 65

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L  V LYVTLEPC MCA  +  +R+ RL +GA +PK G + +          +H  
Sbjct: 66  GAWRLSGVTLYVTLEPCAMCAGGLVQSRVTRLVFGAFDPKAGAVGSLYNLVEEPRHNHRL 125

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           ++  GI    SR +++ FF   R
Sbjct: 126 QVTSGILADESRLLLKTFFGRLR 148


>gi|261868753|ref|YP_003256675.1| tRNA-specific adenosine deaminase [Aggregatibacter
           actinomycetemcomitans D11S-1]
 gi|261414085|gb|ACX83456.1| tRNA-specific adenosine deaminase [Aggregatibacter
           actinomycetemcomitans D11S-1]
          Length = 175

 Score =  100 bits (249), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 60/144 (41%), Positives = 81/144 (56%), Gaps = 1/144 (0%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           FM  AL  A  A    EIPVGAV V    +II    N +    D TAHAEI+ +R G + 
Sbjct: 12  FMHHALMLAGKAEALGEIPVGAVLVSEAGEIIGEGWNLSIIHSDPTAHAEIVTLRQGGQK 71

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           L    L    LYVTLEPCTMCA AI  +RI+RL +GA++ K G + +   F+     +H+
Sbjct: 72  LQNYRLLNTTLYVTLEPCTMCAGAILHSRIKRLVFGAADYKTGAVGSRFHFFDDYKMNHA 131

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
            EI  G+ +Q   + +  FF++RR
Sbjct: 132 IEITGGVLQQECSEKLSAFFQKRR 155


>gi|227328190|ref|ZP_03832214.1| tRNA-specific adenosine deaminase [Pectobacterium carotovorum
           subsp. carotovorum WPP14]
          Length = 158

 Score =  100 bits (249), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 61/142 (42%), Positives = 75/142 (52%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  AL  AQ A    E+PVGAV VL+N+ I    NR     D TAHAEI+A+R G ++L 
Sbjct: 1   MRYALTLAQRAQDEGEVPVGAVLVLDNEAIGEGWNRPIGHHDPTAHAEIMALRQGGQVLQ 60

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
              L E  LYVTLEPC MCA A+  +RI RL YGAS+ K G   +          +H   
Sbjct: 61  NYRLLETTLYVTLEPCIMCAGAMIHSRIGRLVYGASDEKTGAAGSLVDILRHPGMNHQIV 120

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
           I  GI        +  FF+ RR
Sbjct: 121 IESGILADECSATLSAFFRLRR 142


>gi|170759519|ref|YP_001785356.1| cytidine/deoxycytidylate deaminase family protein [Clostridium
           botulinum A3 str. Loch Maree]
 gi|169406508|gb|ACA54919.1| cytidine/deoxycytidylate deaminase family protein [Clostridium
           botulinum A3 str. Loch Maree]
          Length = 145

 Score =  100 bits (249), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 59/145 (40%), Positives = 81/145 (55%), Gaps = 1/145 (0%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           N ++  A+ EA+ +    E+PVGA+ V  NKII+++ N    LKD  AHAEIL+I+  C 
Sbjct: 2   NDYIEYAIIEAKKSLAIGEVPVGAIIVKENKIIAKSHNLKETLKDPIAHAEILSIKKACN 61

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
           IL    L    +YVTLEPC MCA+AI  +RI  LY G  +P GG   +       A    
Sbjct: 62  ILGDWRLKGCKMYVTLEPCPMCASAIIQSRISELYIGTFDPVGGACGSAVNITNNAHLKS 121

Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149
           +  I    +++ SR II +FFK  R
Sbjct: 122 NLNIKWLYNDECSR-IITNFFKNIR 145


>gi|188588285|ref|YP_001922596.1| tRNA-specific adenosine deaminase [Clostridium botulinum E3 str.
           Alaska E43]
 gi|188498566|gb|ACD51702.1| tRNA-specific adenosine deaminase [Clostridium botulinum E3 str.
           Alaska E43]
          Length = 157

 Score =  100 bits (249), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 50/103 (48%), Positives = 65/103 (63%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           F+  A EEA+ A  + E+P+GAV V +N +IS+A N    LKD TAHAEILAIR   + L
Sbjct: 8   FLDIAKEEAKKAMSKGEVPIGAVIVKDNIVISKAHNLKETLKDATAHAEILAIREASKFL 67

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109
               L   ++YVTLEPCTMC +AI  +RI +L+ G  N   G 
Sbjct: 68  DDWRLNGTEMYVTLEPCTMCTSAIIQSRISKLHIGTFNKDMGA 110


>gi|148653387|ref|YP_001280480.1| CMP/dCMP deaminase, zinc-binding [Psychrobacter sp. PRwf-1]
 gi|148572471|gb|ABQ94530.1| CMP/dCMP deaminase, zinc-binding [Psychrobacter sp. PRwf-1]
          Length = 190

 Score =  100 bits (249), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 58/144 (40%), Positives = 82/144 (56%), Gaps = 1/144 (0%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  AL  AQ  A + E+PVGAV V +NKII    N+     D TAHAE++A+R  C+ L
Sbjct: 37  FMRRALALAQQGASQEEVPVGAVLVCDNKIIGEGFNQPITTSDPTAHAEVVALRCACQTL 96

Query: 67  SQEILP-EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
               LP    LYVTLEPCTMC  A+  AR+ RL +    P+ G + +      +   +H 
Sbjct: 97  QNYRLPPNTTLYVTLEPCTMCLGALIHARLARLVFATFEPRAGMVGSQLNLTEMDFYNHK 156

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
            + Y G+ +Q+S+  ++ FF+ RR
Sbjct: 157 MQAYSGLLQQQSQTQLRSFFRARR 180


>gi|90410888|ref|ZP_01218902.1| Putative cytosine/adenosine deaminase [Photobacterium profundum
           3TCK]
 gi|90328101|gb|EAS44412.1| Putative cytosine/adenosine deaminase [Photobacterium profundum
           3TCK]
          Length = 175

 Score =  100 bits (249), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 51/144 (35%), Positives = 80/144 (55%)

Query: 6   VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           ++M  A+E A  A    E+PVGAV V   +++    NR+    D TAHAE++A+R   ++
Sbjct: 16  LYMRRAIELASQAEAEGEVPVGAVVVYEGRVVGEGWNRSIGQHDATAHAEMMALRQAGKV 75

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           +    L +  LYVTLEPC MCA A+  +RI ++ +GAS+ K G   +     +    +H 
Sbjct: 76  IQNYRLLDATLYVTLEPCPMCAGAMVHSRIGKVIFGASDLKTGAAGSVMNLLSYDEVNHH 135

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
            +   G+ ++  R  +Q FFK RR
Sbjct: 136 VDCQAGVLDEECRAQLQAFFKRRR 159


>gi|317049171|ref|YP_004116819.1| CMP/dCMP deaminase zinc-binding protein [Pantoea sp. At-9b]
 gi|316950788|gb|ADU70263.1| CMP/dCMP deaminase zinc-binding protein [Pantoea sp. At-9b]
          Length = 165

 Score =  100 bits (249), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 56/143 (39%), Positives = 78/143 (54%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  AL  A+ A  + E+PVGAV V  + +I    NR     D TAHAEI+A+R G ++L
Sbjct: 9   WMRHALRLARLAWEQGEVPVGAVLVQGDTVIGEGWNRPIGQHDPTAHAEIMALRQGGKVL 68

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  LYVTLEPC MCA A+  +RI RL YGA + K G   +          +H  
Sbjct: 69  ENYRLLDTTLYVTLEPCVMCAGAMVHSRITRLVYGAKDEKTGAAGSLLDVIGHPGMNHQI 128

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           +I  G+  +    ++ DFF+ RR
Sbjct: 129 QIDSGVLAEECAAMLSDFFRMRR 151


>gi|259907686|ref|YP_002648042.1| tRNA-specific adenosine deaminase [Erwinia pyrifoliae Ep1/96]
 gi|224963308|emb|CAX54793.1| tRNA-specific adenosine deaminase [Erwinia pyrifoliae Ep1/96]
 gi|310764806|gb|ADP09756.1| tRNA-specific adenosine deaminase [Erwinia sp. Ejp617]
          Length = 166

 Score =  100 bits (249), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 54/143 (37%), Positives = 78/143 (54%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  AL  A+ A    E+PVGAV VL+ + I    NR     D TAHAE++A+R G +++
Sbjct: 9   WMRHALRLARRAWDEGEVPVGAVLVLDGQAIGEGWNRPIGQHDPTAHAEMMALRQGGKVI 68

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  LYVTLEPC MCA A+   R+ RL YGA + K G   +       A  +H  
Sbjct: 69  ENYRLLDTTLYVTLEPCVMCAGAMIHGRVGRLVYGARDAKTGAAGSLLDVLGHAGMNHHV 128

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           ++  G+       ++ DFF++RR
Sbjct: 129 QVDCGVLRDECAAMLSDFFRQRR 151


>gi|320547592|ref|ZP_08041877.1| tRNA-specific adenosine deaminase [Streptococcus equinus ATCC 9812]
 gi|320447667|gb|EFW88425.1| tRNA-specific adenosine deaminase [Streptococcus equinus ATCC 9812]
          Length = 168

 Score =  100 bits (249), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 58/143 (40%), Positives = 79/143 (55%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  AL+EAQ +  + EIP+G V V + +II R  N   E +    HAEI+AI       
Sbjct: 12  FMREALKEAQKSLEKEEIPIGCVIVKDGEIIGRGHNAREEQQKAILHAEIMAINEANENE 71

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  L+VT+EPC MC+ AI LARI ++ YGA+N K GG  +     T    +H  
Sbjct: 72  GNWRLLDSMLFVTIEPCVMCSGAIGLARIPQVIYGAANQKFGGAGSLYDILTDIRLNHRV 131

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+  GI E     I+QDFF++ R
Sbjct: 132 EVETGILEAECAGIMQDFFRKNR 154


>gi|70732252|ref|YP_262008.1| cytidine/deoxycytidylate deaminase family protein [Pseudomonas
           fluorescens Pf-5]
 gi|68346551|gb|AAY94157.1| cytidine/deoxycytidylate deaminase family protein [Pseudomonas
           fluorescens Pf-5]
          Length = 162

 Score =  100 bits (249), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 53/127 (41%), Positives = 75/127 (59%)

Query: 23  EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEP 82
           E+PVGAV VL+ ++I R  N      D +AHAE++AIR   + +S   LP   LYVTLEP
Sbjct: 34  EVPVGAVLVLDGQVIGRGYNCPISGSDPSAHAEMVAIREAAQAVSNYRLPGSTLYVTLEP 93

Query: 83  CTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQ 142
           C+MCA  I  +RI R+ YGA  PK G +++  QF+T    +H      G+  +    ++ 
Sbjct: 94  CSMCAGLIVHSRIARVVYGALEPKAGIVQSQGQFFTQGFLNHRVLYEGGVLAEECGTVLS 153

Query: 143 DFFKERR 149
           +FFK RR
Sbjct: 154 EFFKARR 160


>gi|315612142|ref|ZP_07887058.1| tRNA-specific adenosine deaminase [Streptococcus sanguinis ATCC
           49296]
 gi|315315805|gb|EFU63841.1| tRNA-specific adenosine deaminase [Streptococcus sanguinis ATCC
           49296]
          Length = 155

 Score =  100 bits (249), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 59/149 (39%), Positives = 79/149 (53%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +++   FM  AL EA+ A   +EIP+G V V + +II R  N   EL+    HAEI+AI 
Sbjct: 5   VEEKEAFMREALREAEIALEHDEIPIGCVIVKDGEIIGRGHNAREELQRAVMHAEIMAIE 64

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
                     L    L+VT+EPC MC+ AI LARI ++ YGA N K G   +     T  
Sbjct: 65  NANVSEESWRLLNCTLFVTIEPCVMCSGAIGLARIPKVVYGAKNQKFGAAGSLYDILTDE 124

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  E+  GI E     I+QDFF+ RR
Sbjct: 125 RLNHRVEVETGILEDDCVAIMQDFFRNRR 153


>gi|291085019|ref|ZP_06351792.2| tRNA-specific adenosine deaminase [Citrobacter youngae ATCC 29220]
 gi|291071670|gb|EFE09779.1| tRNA-specific adenosine deaminase [Citrobacter youngae ATCC 29220]
          Length = 154

 Score =  100 bits (249), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 56/142 (39%), Positives = 76/142 (53%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  AL  A+ A    E+PVGAV V NN++I    NR     D TAHAEI+A+R G  +L 
Sbjct: 1   MRHALTLAKRAWDEREVPVGAVLVHNNRVIGEGWNRPIGHHDPTAHAEIMALRQGGLVLQ 60

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
              L +  LYVTLEPC MCA A+  +RI R+ +GA + K G   +          +H  E
Sbjct: 61  NYRLLDATLYVTLEPCVMCAGAMVHSRIGRVVFGARDAKTGAAGSLMDVLHHPGMNHRVE 120

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
           +  G+       ++ DFF+ RR
Sbjct: 121 VTEGVLRDECATLLSDFFRMRR 142


>gi|258620044|ref|ZP_05715084.1| zinc-binding domain protein [Vibrio mimicus VM573]
 gi|258587777|gb|EEW12486.1| zinc-binding domain protein [Vibrio mimicus VM573]
          Length = 178

 Score =  100 bits (249), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 55/143 (38%), Positives = 78/143 (54%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  A+  A  A  + E+PVGAV V + +II+   N +    D TAHAEI  IR   ++L
Sbjct: 21  FMRRAIMLAAQAEEQGEVPVGAVLVRDGEIIAEGWNCSITHHDATAHAEIEVIRKAGKVL 80

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
           S   L +  LYVTLEPC MCA A+  +R++R+ YGA + K G        +     +H  
Sbjct: 81  SNYRLLDTTLYVTLEPCPMCAGALLHSRVKRIVYGAPDLKAGAAGTVMDLFNSQASYHYA 140

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
            +  G+ E+  R  +Q FF+ RR
Sbjct: 141 TVEKGLLEEECRAQLQAFFQRRR 163


>gi|253702219|ref|YP_003023408.1| CMP/dCMP deaminase zinc-binding [Geobacter sp. M21]
 gi|251777069|gb|ACT19650.1| CMP/dCMP deaminase zinc-binding protein [Geobacter sp. M21]
          Length = 166

 Score =  100 bits (249), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 51/148 (34%), Positives = 81/148 (54%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           K  + +M  A+ +A+ A    E+P+GAV V +  +I+R  N     +D  AHAE++AIR 
Sbjct: 3   KDDHYWMGQAIAQARRAEAIGEVPIGAVVVKDGVVIARGHNLRESKQDPAAHAEMIAIRK 62

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
             + L+   L    LYVTLEPCTMC  A+ L+R+ R+ +G+ +PKGG   +         
Sbjct: 63  AAKKLASWRLTGATLYVTLEPCTMCMGAVILSRLERVVFGSYDPKGGAAGSLYDLSDDKR 122

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +HS  + PG+  + +  ++  FF   R
Sbjct: 123 LNHSVILTPGVRGEETSSMLSGFFAGLR 150


>gi|262190740|ref|ZP_06048969.1| tRNA-specific adenosine-34 deaminase [Vibrio cholerae CT 5369-93]
 gi|262033384|gb|EEY51893.1| tRNA-specific adenosine-34 deaminase [Vibrio cholerae CT 5369-93]
          Length = 175

 Score =  100 bits (248), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 55/143 (38%), Positives = 78/143 (54%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  A+  A  A  + E+PVGAV V + +II+   N +    D TAHAEI  IR   + L
Sbjct: 13  FMRRAIVLAAQAEAQGEVPVGAVLVRDGEIIAEGWNGSITNHDATAHAEIEVIRKAGKAL 72

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
           S   L +  LYVTLEPC MCA A+  +R++R+ YGA + K G        ++    +H  
Sbjct: 73  SNYRLLDTTLYVTLEPCPMCAGALLHSRVKRIVYGAPDLKAGAAGTVMDLFSSQAAYHYA 132

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
            +  G+ E+  R  +Q FF+ RR
Sbjct: 133 TVEKGLLEEECRAQLQAFFQRRR 155


>gi|300717977|ref|YP_003742780.1| tRNA-specific adenosine deaminase [Erwinia billingiae Eb661]
 gi|299063813|emb|CAX60933.1| tRNA-specific adenosine deaminase [Erwinia billingiae Eb661]
          Length = 171

 Score =  100 bits (248), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 56/143 (39%), Positives = 77/143 (53%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  AL  A+ A    E+PVGAV V  +K I    NR     D TAHAEI+A+R G ++L
Sbjct: 10  WMRHALMLARRAWEEGEVPVGAVLVQGDKAIGEGWNRPIGHHDPTAHAEIMALRQGGKVL 69

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  LYVTLEPC MCA A+   RI RL +GA + K G   +       A  +H  
Sbjct: 70  ENYRLLDTTLYVTLEPCVMCAGAMVHGRIGRLVFGARDEKTGAAGSLIDVLGHAGMNHQV 129

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           ++  G+  +    ++ DFF+ RR
Sbjct: 130 KVEEGMLAEECAGMLSDFFRHRR 152


>gi|197264537|ref|ZP_03164611.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA23]
 gi|205356928|ref|ZP_02343159.2| tRNA-specific adenosine deaminase [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA29]
 gi|197242792|gb|EDY25412.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA23]
 gi|205325427|gb|EDZ13266.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA29]
          Length = 172

 Score =  100 bits (248), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 56/143 (39%), Positives = 77/143 (53%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  AL  A+ A    E+PVGAV V N+++I    NR     D TAHAEI+A+R G  +L
Sbjct: 11  WMRHALTLAKRAWDEREVPVGAVLVHNHRVIGEGWNRPIGRHDPTAHAEIMALRQGGLVL 70

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  LYVTLEPC MCA A+  +RI R+ +GA + K G   +          +H  
Sbjct: 71  QNYRLLDTTLYVTLEPCVMCAGAMVHSRIGRVVFGARDAKTGAAGSLIDVLHHPGMNHRV 130

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           EI  G+       ++ DFF+ RR
Sbjct: 131 EIIEGVLRDECATLLSDFFRMRR 153


>gi|194451068|ref|YP_002046630.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL476]
 gi|195874089|ref|ZP_02700525.2| tRNA-specific adenosine deaminase [Salmonella enterica subsp.
           enterica serovar Newport str. SL317]
 gi|205357850|ref|ZP_02573795.2| tRNA-specific adenosine deaminase [Salmonella enterica subsp.
           enterica serovar 4,[5],12:i:- str. CVM23701]
 gi|205359212|ref|ZP_02668290.2| tRNA-specific adenosine deaminase [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL486]
 gi|205360435|ref|ZP_02683354.2| tRNA-specific adenosine deaminase [Salmonella enterica subsp.
           enterica serovar Hadar str. RI_05P066]
 gi|213053109|ref|ZP_03345987.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp.
           enterica serovar Typhi str. E00-7866]
 gi|213425288|ref|ZP_03358038.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp.
           enterica serovar Typhi str. E02-1180]
 gi|213586542|ref|ZP_03368368.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-0664]
 gi|213650179|ref|ZP_03380232.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp.
           enterica serovar Typhi str. J185]
 gi|213857782|ref|ZP_03384753.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp.
           enterica serovar Typhi str. M223]
 gi|150421689|sp|Q8XGY4|TADA_SALTI RecName: Full=tRNA-specific adenosine deaminase
 gi|150421690|sp|Q7CQ08|TADA_SALTY RecName: Full=tRNA-specific adenosine deaminase
 gi|194409372|gb|ACF69591.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL476]
 gi|195630767|gb|EDX49359.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp.
           enterica serovar Newport str. SL317]
 gi|205329109|gb|EDZ15873.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp.
           enterica serovar 4,[5],12:i:- str. CVM23701]
 gi|205337614|gb|EDZ24378.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL486]
 gi|205349365|gb|EDZ35996.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp.
           enterica serovar Hadar str. RI_05P066]
 gi|312913557|dbj|BAJ37531.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp.
           enterica serovar Typhimurium str. T000240]
 gi|321222726|gb|EFX47797.1| tRNA-specific adenosine-34 deaminase [Salmonella enterica subsp.
           enterica serovar Typhimurium str. TN061786]
          Length = 172

 Score =  100 bits (248), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 56/143 (39%), Positives = 77/143 (53%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  AL  A+ A    E+PVGAV V N+++I    NR     D TAHAEI+A+R G  +L
Sbjct: 11  WMRHALTLAKRAWDEREVPVGAVLVHNHRVIGEGWNRPIGRHDPTAHAEIMALRQGGLVL 70

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  LYVTLEPC MCA A+  +RI R+ +GA + K G   +          +H  
Sbjct: 71  QNYRLLDTTLYVTLEPCVMCAGAMVHSRIGRVVFGARDAKTGAAGSLIDVLHHPGMNHRV 130

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           EI  G+       ++ DFF+ RR
Sbjct: 131 EIIEGVLRDECATLLSDFFRMRR 153


>gi|322620458|gb|EFY17323.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-1]
 gi|322625074|gb|EFY21903.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-3]
 gi|322629482|gb|EFY26258.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-4]
 gi|322639849|gb|EFY36528.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 531954]
 gi|322644265|gb|EFY40809.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp.
           enterica serovar Montevideo str. NC_MB110209-0054]
 gi|322649957|gb|EFY46377.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp.
           enterica serovar Montevideo str. OH_2009072675]
 gi|322658212|gb|EFY54478.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 19N]
 gi|323200394|gb|EFZ85475.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 556150-1]
 gi|323201294|gb|EFZ86361.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 609460]
 gi|323208364|gb|EFZ93304.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 507440-20]
 gi|323221772|gb|EGA06180.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB102109-0047]
 gi|323245221|gb|EGA29222.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 315731156]
 gi|323248795|gb|EGA32722.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2009159199]
 gi|323259073|gb|EGA42721.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008283]
 gi|323261995|gb|EGA45560.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008284]
 gi|323267779|gb|EGA51260.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008285]
          Length = 172

 Score =  100 bits (248), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 56/143 (39%), Positives = 77/143 (53%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  AL  A+ A    E+PVGAV V N+++I    NR     D TAHAEI+A+R G  +L
Sbjct: 11  WMRHALTLAKRAWDEREVPVGAVLVHNHRVIGEGWNRPIGRHDPTAHAEIMALRQGGLVL 70

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  LYVTLEPC MCA AI  +RI R+ +GA + K G   +          +H  
Sbjct: 71  QNYRLLDTTLYVTLEPCVMCAGAIVHSRIGRVVFGARDAKTGAAGSLIDVLHHPGMNHRV 130

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           +I  G+       ++ DFF+ RR
Sbjct: 131 DIIEGVLRDECATLLSDFFRMRR 153


>gi|311278508|ref|YP_003940739.1| CMP/dCMP deaminase zinc-binding protein [Enterobacter cloacae SCF1]
 gi|308747703|gb|ADO47455.1| CMP/dCMP deaminase zinc-binding protein [Enterobacter cloacae SCF1]
          Length = 165

 Score =  100 bits (248), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 56/143 (39%), Positives = 76/143 (53%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  AL  AQ A    E+PVGAV V  N++I    NR     D TAHAEI+A+R G  +L
Sbjct: 11  WMRHALGLAQRAWDEGEVPVGAVLVYQNQVIGEGWNRPIGRHDPTAHAEIMALRQGGLVL 70

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  LYVTLEPC MCA A+  +RI R+ +GA + K G   +          +H  
Sbjct: 71  QNYRLIDTTLYVTLEPCVMCAGAMVHSRIGRVVFGARDAKTGAAGSLMDVLHHPGMNHRV 130

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+  G+       ++ DFF+ RR
Sbjct: 131 EVTEGVLAGECSAMLSDFFRARR 153


>gi|254225102|ref|ZP_04918716.1| zinc-binding domain protein [Vibrio cholerae V51]
 gi|125622489|gb|EAZ50809.1| zinc-binding domain protein [Vibrio cholerae V51]
          Length = 193

 Score =  100 bits (248), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 55/143 (38%), Positives = 78/143 (54%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  A+  A  A  + E+PVGAV V + +II+   N +    D TAHAEI  IR   + L
Sbjct: 31  FMRRAIVLAAQAEAQGEVPVGAVLVRDGEIIAEGWNGSITNHDATAHAEIEVIRKAGKAL 90

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
           S   L +  LYVTLEPC MCA A+  +R++R+ YGA + K G        ++    +H  
Sbjct: 91  SNYRLLDTTLYVTLEPCPMCAGALLHSRVKRIVYGAPDLKAGAAGTVMDLFSSQAAYHYA 150

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
            +  G+ E+  R  +Q FF+ RR
Sbjct: 151 TVEKGLLEEECRAQLQAFFQRRR 173


>gi|161612662|ref|YP_001586627.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|161362026|gb|ABX65794.1| hypothetical protein SPAB_00358 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
          Length = 172

 Score =  100 bits (248), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 56/143 (39%), Positives = 77/143 (53%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  AL  A+ A    E+PVGAV V N+++I    NR     D TAHAEI+A+R G  +L
Sbjct: 11  WMRHALTLAKRAWDEREVPVGAVLVHNHRVIGEGWNRPIGRHDPTAHAEIMALRQGGLVL 70

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  LYVTLEPC MCA A+  +RI R+ +GA + K G   +          +H  
Sbjct: 71  QNYRLLDTTLYVTLEPCVMCAGAMVHSRIGRVVFGARDAKTGAAGSLIDVLHHPGMNHRV 130

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           EI  G+       ++ DFF+ RR
Sbjct: 131 EIIEGVLRDECATLLSDFFRMRR 153


>gi|213612302|ref|ZP_03370128.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-2068]
          Length = 163

 Score =  100 bits (248), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 56/143 (39%), Positives = 77/143 (53%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  AL  A+ A    E+PVGAV V N+++I    NR     D TAHAEI+A+R G  +L
Sbjct: 2   WMRHALTLAKRAWDEREVPVGAVLVHNHRVIGEGWNRPIGRHDPTAHAEIMALRQGGLVL 61

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  LYVTLEPC MCA A+  +RI R+ +GA + K G   +          +H  
Sbjct: 62  QNYRLLDTTLYVTLEPCVMCAGAMVHSRIGRVVFGARDAKTGAAGSLIDVLHHPGMNHRV 121

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           EI  G+       ++ DFF+ RR
Sbjct: 122 EIIEGVLRDECATLLSDFFRMRR 144


>gi|50843619|ref|YP_056846.1| putative cytidine and deoxycytidylate deaminase [Propionibacterium
           acnes KPA171202]
 gi|50841221|gb|AAT83888.1| putative cytidine and deoxycytidylate deaminase [Propionibacterium
           acnes KPA171202]
 gi|313765224|gb|EFS36588.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Propionibacterium acnes HL013PA1]
 gi|313771619|gb|EFS37585.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Propionibacterium acnes HL074PA1]
 gi|313794199|gb|EFS42219.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Propionibacterium acnes HL110PA1]
 gi|313803320|gb|EFS44516.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Propionibacterium acnes HL110PA2]
 gi|313808654|gb|EFS47114.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Propionibacterium acnes HL087PA2]
 gi|313810633|gb|EFS48347.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Propionibacterium acnes HL083PA1]
 gi|313817055|gb|EFS54769.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Propionibacterium acnes HL059PA1]
 gi|313819106|gb|EFS56820.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Propionibacterium acnes HL046PA2]
 gi|313821181|gb|EFS58895.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Propionibacterium acnes HL036PA1]
 gi|313823858|gb|EFS61572.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Propionibacterium acnes HL036PA2]
 gi|313829225|gb|EFS66939.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Propionibacterium acnes HL063PA2]
 gi|313831470|gb|EFS69184.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Propionibacterium acnes HL007PA1]
 gi|313834120|gb|EFS71834.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Propionibacterium acnes HL056PA1]
 gi|313839149|gb|EFS76863.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Propionibacterium acnes HL086PA1]
 gi|314916774|gb|EFS80605.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Propionibacterium acnes HL005PA4]
 gi|314919085|gb|EFS82916.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Propionibacterium acnes HL050PA1]
 gi|314921113|gb|EFS84944.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Propionibacterium acnes HL050PA3]
 gi|314926198|gb|EFS90029.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Propionibacterium acnes HL036PA3]
 gi|314931378|gb|EFS95209.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Propionibacterium acnes HL067PA1]
 gi|314956234|gb|EFT00606.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Propionibacterium acnes HL027PA1]
 gi|314958729|gb|EFT02831.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Propionibacterium acnes HL002PA1]
 gi|314961035|gb|EFT05136.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Propionibacterium acnes HL002PA2]
 gi|314963855|gb|EFT07955.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Propionibacterium acnes HL082PA1]
 gi|314968860|gb|EFT12958.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Propionibacterium acnes HL037PA1]
 gi|314974836|gb|EFT18931.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Propionibacterium acnes HL053PA1]
 gi|314977837|gb|EFT21931.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Propionibacterium acnes HL045PA1]
 gi|314979008|gb|EFT23102.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Propionibacterium acnes HL072PA2]
 gi|314984517|gb|EFT28609.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Propionibacterium acnes HL005PA1]
 gi|314985912|gb|EFT30004.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Propionibacterium acnes HL005PA2]
 gi|314989321|gb|EFT33412.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Propionibacterium acnes HL005PA3]
 gi|315078338|gb|EFT50377.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Propionibacterium acnes HL053PA2]
 gi|315081352|gb|EFT53328.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Propionibacterium acnes HL078PA1]
 gi|315085008|gb|EFT56984.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Propionibacterium acnes HL027PA2]
 gi|315087538|gb|EFT59514.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Propionibacterium acnes HL002PA3]
 gi|315089555|gb|EFT61531.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Propionibacterium acnes HL072PA1]
 gi|315095685|gb|EFT67661.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Propionibacterium acnes HL038PA1]
 gi|315099989|gb|EFT71965.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Propionibacterium acnes HL059PA2]
 gi|315102851|gb|EFT74827.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Propionibacterium acnes HL046PA1]
 gi|315106621|gb|EFT78597.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Propionibacterium acnes HL030PA1]
 gi|315110552|gb|EFT82528.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Propionibacterium acnes HL030PA2]
 gi|327325845|gb|EGE67636.1| tRNA-specific adenosine deaminase [Propionibacterium acnes
           HL096PA3]
 gi|327332941|gb|EGE74673.1| tRNA-specific adenosine deaminase [Propionibacterium acnes
           HL096PA2]
 gi|327448646|gb|EGE95300.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Propionibacterium acnes HL043PA1]
 gi|327450305|gb|EGE96959.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Propionibacterium acnes HL013PA2]
 gi|327451128|gb|EGE97782.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Propionibacterium acnes HL043PA2]
 gi|327455462|gb|EGF02117.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Propionibacterium acnes HL087PA3]
 gi|327455948|gb|EGF02603.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Propionibacterium acnes HL092PA1]
 gi|327457603|gb|EGF04258.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Propionibacterium acnes HL083PA2]
 gi|328756878|gb|EGF70494.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Propionibacterium acnes HL087PA1]
 gi|328757762|gb|EGF71378.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Propionibacterium acnes HL020PA1]
 gi|328759467|gb|EGF73083.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Propionibacterium acnes HL025PA2]
 gi|328761913|gb|EGF75422.1| tRNA-specific adenosine deaminase [Propionibacterium acnes
           HL099PA1]
 gi|332676565|gb|AEE73381.1| tRNA-specific adenosine deaminase [Propionibacterium acnes 266]
          Length = 149

 Score =  100 bits (248), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 54/143 (37%), Positives = 79/143 (55%), Gaps = 1/143 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M+ AL+ A+ AA   ++P+GAV +  N +++S AGN      D TAHAE+LAIR      
Sbjct: 1   MTQALDVARRAATWGDVPIGAVILGANGEVLSEAGNERERTGDPTAHAEVLAIRRAAEAR 60

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  L VTLEPCTMCA  I  ARI R+ +GA +PK G + +           H P
Sbjct: 61  DGWRLGDCTLVVTLEPCTMCAGTIVAARIPRVVFGAFDPKAGAVSSLFDAMRDPRLPHRP 120

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           ++  G+  + S  ++++FF   R
Sbjct: 121 KVVTGVMAEESSALLREFFDGHR 143


>gi|262172118|ref|ZP_06039796.1| tRNA-specific adenosine-34 deaminase [Vibrio mimicus MB-451]
 gi|261893194|gb|EEY39180.1| tRNA-specific adenosine-34 deaminase [Vibrio mimicus MB-451]
          Length = 170

 Score =  100 bits (248), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 55/143 (38%), Positives = 78/143 (54%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  A+  A  A  + E+PVGAV V + +II+   N +    D TAHAEI  IR   ++L
Sbjct: 13  FMRRAIMLAAQAEEQGEVPVGAVLVRDGEIIAEGWNCSITHHDATAHAEIEVIRKAGKVL 72

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
           S   L +  LYVTLEPC MCA A+  +R++R+ YGA + K G        +     +H  
Sbjct: 73  SNYRLLDTTLYVTLEPCPMCAGALLHSRVKRIVYGAPDLKAGAAGTVMDLFNSQASYHYA 132

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
            +  G+ E+  R  +Q FF+ RR
Sbjct: 133 TVEKGLLEEECRAQLQAFFQRRR 155


>gi|229826609|ref|ZP_04452678.1| hypothetical protein GCWU000182_01985 [Abiotrophia defectiva ATCC
           49176]
 gi|229789479|gb|EEP25593.1| hypothetical protein GCWU000182_01985 [Abiotrophia defectiva ATCC
           49176]
          Length = 167

 Score =  100 bits (248), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 57/151 (37%), Positives = 83/151 (54%), Gaps = 4/151 (2%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M     +M  A+++A+ A   +E+P+G V VL+ KII+R  NR        AHAE++AI+
Sbjct: 1   MTTDEKWMKEAIKQAEKAKKLDEVPIGCVIVLDGKIIARGYNRRNTDHTSLAHAEMMAIK 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
             C+ +    L +  LYVTLEPC MCA AI  +R+ R+  GA N K G    G+ F  L 
Sbjct: 61  KACKKIRDWRLEKCTLYVTLEPCQMCAGAIVQSRVERVVIGAMNKKAGCA--GSIFNLLE 118

Query: 121 T--CHHSPEIYPGISEQRSRQIIQDFFKERR 149
               +H  E+  G+ E    +++  FFKE R
Sbjct: 119 EDRFNHKAEVVRGVLENECSEMMSMFFKELR 149


>gi|15640880|ref|NP_230511.1| yfhC protein [Vibrio cholerae O1 biovar El Tor str. N16961]
 gi|121585742|ref|ZP_01675537.1| zinc-binding domain protein [Vibrio cholerae 2740-80]
 gi|121728321|ref|ZP_01681351.1| zinc-binding domain protein [Vibrio cholerae V52]
 gi|147675155|ref|YP_001216345.1| zinc-binding domain-containing protein [Vibrio cholerae O395]
 gi|153802057|ref|ZP_01956643.1| zinc-binding domain protein [Vibrio cholerae MZO-3]
 gi|153819008|ref|ZP_01971675.1| zinc-binding domain protein [Vibrio cholerae NCTC 8457]
 gi|153823068|ref|ZP_01975735.1| zinc-binding domain protein [Vibrio cholerae B33]
 gi|227081040|ref|YP_002809591.1| yfhC protein [Vibrio cholerae M66-2]
 gi|229505525|ref|ZP_04395035.1| tRNA-specific adenosine-34 deaminase [Vibrio cholerae BX 330286]
 gi|229510804|ref|ZP_04400283.1| tRNA-specific adenosine-34 deaminase [Vibrio cholerae B33]
 gi|229517925|ref|ZP_04407369.1| tRNA-specific adenosine-34 deaminase [Vibrio cholerae RC9]
 gi|229608545|ref|YP_002879193.1| tRNA-specific adenosine-34 deaminase [Vibrio cholerae MJ-1236]
 gi|254848002|ref|ZP_05237352.1| zinc-binding domain-containing protein [Vibrio cholerae MO10]
 gi|298499008|ref|ZP_07008815.1| zinc-binding domain-containing protein [Vibrio cholerae MAK 757]
 gi|9655317|gb|AAF94026.1| yfhC protein [Vibrio cholerae O1 biovar El Tor str. N16961]
 gi|121550105|gb|EAX60121.1| zinc-binding domain protein [Vibrio cholerae 2740-80]
 gi|121629376|gb|EAX61806.1| zinc-binding domain protein [Vibrio cholerae V52]
 gi|124122416|gb|EAY41159.1| zinc-binding domain protein [Vibrio cholerae MZO-3]
 gi|126510441|gb|EAZ73035.1| zinc-binding domain protein [Vibrio cholerae NCTC 8457]
 gi|126519394|gb|EAZ76617.1| zinc-binding domain protein [Vibrio cholerae B33]
 gi|146317038|gb|ABQ21577.1| zinc-binding domain protein [Vibrio cholerae O395]
 gi|227008928|gb|ACP05140.1| yfhC protein [Vibrio cholerae M66-2]
 gi|227012684|gb|ACP08894.1| yfhC protein [Vibrio cholerae O395]
 gi|229344640|gb|EEO09614.1| tRNA-specific adenosine-34 deaminase [Vibrio cholerae RC9]
 gi|229350769|gb|EEO15710.1| tRNA-specific adenosine-34 deaminase [Vibrio cholerae B33]
 gi|229357748|gb|EEO22665.1| tRNA-specific adenosine-34 deaminase [Vibrio cholerae BX 330286]
 gi|229371200|gb|ACQ61623.1| tRNA-specific adenosine-34 deaminase [Vibrio cholerae MJ-1236]
 gi|254843707|gb|EET22121.1| zinc-binding domain-containing protein [Vibrio cholerae MO10]
 gi|297543341|gb|EFH79391.1| zinc-binding domain-containing protein [Vibrio cholerae MAK 757]
          Length = 193

 Score =  100 bits (248), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 55/143 (38%), Positives = 78/143 (54%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  A+  A  A  + E+PVGAV V + +II+   N +    D TAHAEI  IR   + L
Sbjct: 31  FMRRAIVLAAQAEAQGEVPVGAVLVRDGEIIAEGWNGSITNHDATAHAEIEVIRKAGKAL 90

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
           S   L +  LYVTLEPC MCA A+  +R++R+ YGA + K G        ++    +H  
Sbjct: 91  SNYRLLDTTLYVTLEPCPMCAGALLHSRVKRIVYGAPDLKAGAAGTVMDLFSSQAAYHYA 150

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
            +  G+ E+  R  +Q FF+ RR
Sbjct: 151 TVEKGLLEEECRAQLQAFFQRRR 173


>gi|255744661|ref|ZP_05418612.1| tRNA-specific adenosine-34 deaminase [Vibrio cholera CIRS 101]
 gi|262161205|ref|ZP_06030316.1| tRNA-specific adenosine-34 deaminase [Vibrio cholerae INDRE 91/1]
 gi|262168710|ref|ZP_06036405.1| tRNA-specific adenosine-34 deaminase [Vibrio cholerae RC27]
 gi|255737692|gb|EET93086.1| tRNA-specific adenosine-34 deaminase [Vibrio cholera CIRS 101]
 gi|262022828|gb|EEY41534.1| tRNA-specific adenosine-34 deaminase [Vibrio cholerae RC27]
 gi|262028955|gb|EEY47608.1| tRNA-specific adenosine-34 deaminase [Vibrio cholerae INDRE 91/1]
          Length = 175

 Score =  100 bits (248), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 55/143 (38%), Positives = 78/143 (54%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  A+  A  A  + E+PVGAV V + +II+   N +    D TAHAEI  IR   + L
Sbjct: 13  FMRRAIVLAAQAEAQGEVPVGAVLVRDGEIIAEGWNGSITNHDATAHAEIEVIRKAGKAL 72

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
           S   L +  LYVTLEPC MCA A+  +R++R+ YGA + K G        ++    +H  
Sbjct: 73  SNYRLLDTTLYVTLEPCPMCAGALLHSRVKRIVYGAPDLKAGAAGTVMDLFSSQAAYHYA 132

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
            +  G+ E+  R  +Q FF+ RR
Sbjct: 133 TVEKGLLEEECRAQLQAFFQRRR 155


>gi|238762806|ref|ZP_04623775.1| tRNA-specific adenosine deaminase [Yersinia kristensenii ATCC
           33638]
 gi|238699111|gb|EEP91859.1| tRNA-specific adenosine deaminase [Yersinia kristensenii ATCC
           33638]
          Length = 194

 Score =  100 bits (248), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 57/143 (39%), Positives = 78/143 (54%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  AL  A  A    E+PVGA+ VL+N++I    NR+    D TAHAEI+A+R G + +
Sbjct: 33  WMQRALVLALRAQAEGEVPVGAILVLDNQVIGEGWNRSIGDNDPTAHAEIMALRQGGQAV 92

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  LYVTLEPC MCA A+  +RIRRL YGA++ K G   +          +H  
Sbjct: 93  QNYRLIDATLYVTLEPCVMCAGAMVHSRIRRLVYGANDLKTGAAGSLVDILRHPGMNHQI 152

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           EI  G+        +  FF+ RR
Sbjct: 153 EITAGVLADACSHQLSAFFRLRR 175


>gi|228470550|ref|ZP_04055407.1| cytidine/deoxycytidylate deaminase family protein [Porphyromonas
           uenonis 60-3]
 gi|228307677|gb|EEK16653.1| cytidine/deoxycytidylate deaminase family protein [Porphyromonas
           uenonis 60-3]
          Length = 155

 Score =  100 bits (248), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 50/143 (34%), Positives = 83/143 (58%), Gaps = 5/143 (3%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
            M  AL++A  A   +E+P+GAV  +  +I++++ N+   L D TAHAE+LAI      +
Sbjct: 15  MMQLALQQALVAYEADEVPIGAVIAVGTRILAKSHNQVELLNDPTAHAEMLAITQATAAI 74

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
             + LP+  LYVT+EPC MC  A+   +I R+ YGA++PKGG +      Y+    H   
Sbjct: 75  GGKYLPQCTLYVTVEPCPMCMGALRWTQIGRIVYGAADPKGGYMR-----YSSTLPHPKS 129

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
            +  G+ E+  R+++  +F+ +R
Sbjct: 130 VVMGGVCEEECRELMVSYFQRKR 152


>gi|194445660|ref|YP_002041831.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp.
           enterica serovar Newport str. SL254]
 gi|194404323|gb|ACF64545.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp.
           enterica serovar Newport str. SL254]
          Length = 172

 Score =  100 bits (248), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 56/143 (39%), Positives = 77/143 (53%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  AL  A+ A    E+PVGAV V N+++I    NR     D TAHAEI+A+R G  +L
Sbjct: 11  WMRHALTLAKRAWDEREVPVGAVLVHNHRVIGEGWNRPIGRHDPTAHAEIMALRQGGLVL 70

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  LYVTLEPC MCA A+  +RI R+ +GA + K G   +          +H  
Sbjct: 71  QNYRLLDTTLYVTLEPCVMCAGAMVHSRIGRVVFGARDAKTGAAGSLIDVLHHPGMNHRV 130

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           EI  G+       ++ DFF+ RR
Sbjct: 131 EIIEGVLRDECATLLSDFFRMRR 153


>gi|322613338|gb|EFY10280.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 315996572]
 gi|322633869|gb|EFY30608.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 515920-1]
 gi|322635475|gb|EFY32186.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 515920-2]
 gi|322654860|gb|EFY51177.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp.
           enterica serovar Montevideo str. CASC_09SCPH15965]
 gi|322661716|gb|EFY57934.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 81038-01]
 gi|322669697|gb|EFY65843.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp.
           enterica serovar Montevideo str. MD_MDA09249507]
 gi|322673296|gb|EFY69401.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 414877]
 gi|322674915|gb|EFY71002.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 366867]
 gi|322682938|gb|EFY78956.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 413180]
 gi|322685599|gb|EFY81594.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 446600]
 gi|323191973|gb|EFZ77211.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 609458-1]
 gi|323211560|gb|EFZ96398.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 556152]
 gi|323215992|gb|EGA00724.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB101509-0077]
 gi|323225619|gb|EGA09846.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB110209-0055]
 gi|323229337|gb|EGA13461.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB111609-0052]
 gi|323235348|gb|EGA19432.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 2009083312]
 gi|323237466|gb|EGA21529.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 2009085258]
 gi|323254025|gb|EGA37846.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008282]
 gi|323269662|gb|EGA53114.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008287]
          Length = 183

 Score =  100 bits (248), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 56/143 (39%), Positives = 77/143 (53%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  AL  A+ A    E+PVGAV V N+++I    NR     D TAHAEI+A+R G  +L
Sbjct: 22  WMRHALTLAKRAWDEREVPVGAVLVHNHRVIGEGWNRPIGRHDPTAHAEIMALRQGGLVL 81

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  LYVTLEPC MCA AI  +RI R+ +GA + K G   +          +H  
Sbjct: 82  QNYRLLDTTLYVTLEPCVMCAGAIVHSRIGRVVFGARDAKTGAAGSLIDVLHHPGMNHRV 141

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           +I  G+       ++ DFF+ RR
Sbjct: 142 DIIEGVLRDECATLLSDFFRMRR 164


>gi|16761480|ref|NP_457097.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp.
           enterica serovar Typhi str. CT18]
 gi|16765888|ref|NP_461503.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp.
           enterica serovar Typhimurium str. LT2]
 gi|29140823|ref|NP_804165.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp.
           enterica serovar Typhi str. Ty2]
 gi|62181133|ref|YP_217550.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. SC-B67]
 gi|224582890|ref|YP_002636688.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp.
           enterica serovar Paratyphi C strain RKS4594]
 gi|25303877|pir||AF0827 conserved hypothetical protein STY2814 [imported] - Salmonella
           enterica subsp. enterica serovar Typhi (strain CT18)
 gi|303325222|pdb|3OCQ|A Chain A, Crystal Structure Of Trna-Specific Adenosine Deaminase
           From Salmonella Enterica
 gi|16421115|gb|AAL21462.1| putative cytosine/adenosine deaminase [Salmonella enterica subsp.
           enterica serovar Typhimurium str. LT2]
 gi|16503780|emb|CAD02770.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Typhi]
 gi|29136448|gb|AAO68014.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
 gi|62128766|gb|AAX66469.1| putative Cytosine/adenosine deaminase [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. SC-B67]
 gi|224467417|gb|ACN45247.1| hypothetical protein SPC_1081 [Salmonella enterica subsp. enterica
           serovar Paratyphi C strain RKS4594]
 gi|261247763|emb|CBG25591.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Typhimurium str. D23580]
 gi|267994694|gb|ACY89579.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp.
           enterica serovar Typhimurium str. 14028S]
 gi|301159116|emb|CBW18630.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Typhimurium str. SL1344]
 gi|322715623|gb|EFZ07194.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. A50]
 gi|323130899|gb|ADX18329.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp.
           enterica serovar Typhimurium str. 4/74]
 gi|332989495|gb|AEF08478.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp.
           enterica serovar Typhimurium str. UK-1]
          Length = 183

 Score =  100 bits (248), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 56/143 (39%), Positives = 77/143 (53%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  AL  A+ A    E+PVGAV V N+++I    NR     D TAHAEI+A+R G  +L
Sbjct: 22  WMRHALTLAKRAWDEREVPVGAVLVHNHRVIGEGWNRPIGRHDPTAHAEIMALRQGGLVL 81

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  LYVTLEPC MCA A+  +RI R+ +GA + K G   +          +H  
Sbjct: 82  QNYRLLDTTLYVTLEPCVMCAGAMVHSRIGRVVFGARDAKTGAAGSLIDVLHHPGMNHRV 141

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           EI  G+       ++ DFF+ RR
Sbjct: 142 EIIEGVLRDECATLLSDFFRMRR 164


>gi|330968078|gb|EGH68338.1| cytidine/deoxycytidylate deaminase, zinc-binding region
           [Pseudomonas syringae pv. actinidiae str. M302091]
          Length = 169

 Score =  100 bits (248), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 53/129 (41%), Positives = 74/129 (57%)

Query: 21  RNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80
           R E+PVGAV V N +II R  N      D +AHAE++AIR   R L    LP   LYVTL
Sbjct: 29  RGEVPVGAVVVQNGEIIGRGYNCPISGSDPSAHAEMVAIRDAARALDNYRLPGSTLYVTL 88

Query: 81  EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140
           EPC+MCA  I  +R+ R+ YGA  PK G +++  QF++    +H      G+  +    +
Sbjct: 89  EPCSMCAGLIVHSRVARVVYGALEPKAGIVQSQGQFFSQGFLNHRVLFEGGVLGEECGAM 148

Query: 141 IQDFFKERR 149
           + +FF+ RR
Sbjct: 149 LSEFFRMRR 157


>gi|311694940|gb|ADP97813.1| cytidine/deoxycytidylate deaminase family protein [marine bacterium
           HP15]
          Length = 167

 Score =  100 bits (248), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 61/141 (43%), Positives = 79/141 (56%), Gaps = 4/141 (2%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M+ AL+ A  AA + E+PVGAV VL+ K I    N      D TAHAEI A+R     +
Sbjct: 11  WMNRALQLAGEAAAKGEVPVGAVVVLDGKEIGAGFNAPISGCDPTAHAEIRALRDAAARV 70

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               LP+  LYVTLEPCTMC  AI   RI RL YGA  PK G IE+  +  TL   H + 
Sbjct: 71  GNYRLPDATLYVTLEPCTMCVGAIVHGRISRLVYGAREPKAGAIESARR--TLEEPHLNW 128

Query: 127 EIYP--GISEQRSRQIIQDFF 145
           ++    G+   +  Q+I +FF
Sbjct: 129 DVTAVGGVLSDQCSQVISEFF 149


>gi|156973452|ref|YP_001444359.1| hypothetical protein VIBHAR_01142 [Vibrio harveyi ATCC BAA-1116]
 gi|156525046|gb|ABU70132.1| hypothetical protein VIBHAR_01142 [Vibrio harveyi ATCC BAA-1116]
          Length = 164

 Score =  100 bits (248), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 55/142 (38%), Positives = 76/142 (53%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  A+E A+ A    E+PVGAV V + +II+   NR+    D TAHAEI  +R     L 
Sbjct: 1   MRRAMELAEQAEAEGEVPVGAVLVKDGEIIAEGWNRSICAHDATAHAEIQTLRKAGEALG 60

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
              L +  LYVTLEPC MCA A+  +R++R+ YGA + K G        +     +H   
Sbjct: 61  NYRLLDTTLYVTLEPCPMCAGALLHSRVKRVVYGAPDLKAGAAGTVLNLFESQAAYHYAT 120

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
           +  G+ E+  R  +Q FFK RR
Sbjct: 121 VENGLLEEECRSQLQAFFKRRR 142


>gi|289426038|ref|ZP_06427785.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Propionibacterium acnes SK187]
 gi|289427970|ref|ZP_06429674.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Propionibacterium acnes J165]
 gi|295131701|ref|YP_003582364.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Propionibacterium acnes SK137]
 gi|289153581|gb|EFD02295.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Propionibacterium acnes SK187]
 gi|289158853|gb|EFD07053.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Propionibacterium acnes J165]
 gi|291375889|gb|ADD99743.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Propionibacterium acnes SK137]
          Length = 160

 Score =  100 bits (248), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 54/143 (37%), Positives = 79/143 (55%), Gaps = 1/143 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M+ AL+ A+ AA   ++P+GAV +  N +++S AGN      D TAHAE+LAIR      
Sbjct: 12  MTQALDVARRAATWGDVPIGAVILGANGEVLSEAGNERERTGDPTAHAEVLAIRRAAEAR 71

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  L VTLEPCTMCA  I  ARI R+ +GA +PK G + +           H P
Sbjct: 72  DGWRLGDCTLVVTLEPCTMCAGTIVAARIPRVVFGAFDPKAGAVSSLFDAMRDPRLPHRP 131

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           ++  G+  + S  ++++FF   R
Sbjct: 132 KVVTGVMAEESSALLREFFDGHR 154


>gi|167855119|ref|ZP_02477891.1| hypothetical protein HPS_06809 [Haemophilus parasuis 29755]
 gi|167853754|gb|EDS24996.1| hypothetical protein HPS_06809 [Haemophilus parasuis 29755]
          Length = 157

 Score =  100 bits (248), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 63/143 (44%), Positives = 76/143 (53%), Gaps = 1/143 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  AL  A  A    EIPVGAV V     II    NR   L D TAHAEI AIRM  + L
Sbjct: 1   MQYALSLADKAEAEGEIPVGAVLVDKTGNIIGEGWNRAIILSDPTAHAEIQAIRMAGQQL 60

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  LYVTLEPCTMCA AI  +RI RL +GAS+ K G + +    +     +H  
Sbjct: 61  QNYRLLDTTLYVTLEPCTMCAGAILHSRIGRLVFGASDYKTGALGSRFHLFEDYKMNHFL 120

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           +I  G+      Q I  FF++RR
Sbjct: 121 QIRGGVMANECSQKISAFFRKRR 143


>gi|149196365|ref|ZP_01873420.1| Putative cytosine/adenosine deaminase [Lentisphaera araneosa
           HTCC2155]
 gi|149140626|gb|EDM29024.1| Putative cytosine/adenosine deaminase [Lentisphaera araneosa
           HTCC2155]
          Length = 174

 Score =  100 bits (248), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 56/143 (39%), Positives = 77/143 (53%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  AL +A+ A    E+P+GAV V   ++I++A N+   LKD TAHAEILA+      L
Sbjct: 23  YMRMALRQAEQAFQAGEVPIGAVVVHEGEVIAKAWNQVEMLKDATAHAEILALTQASAHL 82

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
            +  L    LYVT EPC MCA A+  +RI R+ +G ++ KGGG       +      H  
Sbjct: 83  DRWRLHGCTLYVTKEPCPMCAGALVNSRIDRVVFGLADEKGGGCGGSFHIHDHDGLLHKV 142

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           +      E   R +IQ FFK RR
Sbjct: 143 KSEGHCCEDECRLLIQSFFKMRR 165


>gi|224101625|ref|XP_002312358.1| predicted protein [Populus trichocarpa]
 gi|222852178|gb|EEE89725.1| predicted protein [Populus trichocarpa]
          Length = 1364

 Score =  100 bits (248), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 67/165 (40%), Positives = 84/165 (50%), Gaps = 17/165 (10%)

Query: 2    KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
            K   +FM  AL EA+ AA   E+PVGAV V + +II+R  N   EL+D TAHAE++ IR 
Sbjct: 1161 KTDEMFMREALLEAKKAADSWEVPVGAVLVHHGRIIARGHNLVEELRDSTAHAEMICIRE 1220

Query: 62   GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGG------------G 109
                L    L E  LY+TLEPC MCA AI  ARI+ L +GA N   G            G
Sbjct: 1221 ASNKLRTWRLSETTLYITLEPCPMCAGAILQARIKTLVWGAPNKLLGADGSWIRLFPDAG 1280

Query: 110  IENGTQFYTLATC-----HHSPEIYPGISEQRSRQIIQDFFKERR 149
             ENG++            H    I  GI E     ++Q FF+ RR
Sbjct: 1281 EENGSELSNKPAAPVHPFHRKMTIRRGILESECADVMQQFFQLRR 1325


>gi|156932900|ref|YP_001436816.1| hypothetical protein ESA_00702 [Cronobacter sakazakii ATCC BAA-894]
 gi|156531154|gb|ABU75980.1| hypothetical protein ESA_00702 [Cronobacter sakazakii ATCC BAA-894]
          Length = 213

 Score =  100 bits (248), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 56/143 (39%), Positives = 76/143 (53%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  AL  AQ A    E+PVGAV V NN++I    NR     D TAHAEI+A+R G  +L
Sbjct: 51  WMRHALTLAQRAWDEGEVPVGAVLVHNNQVIGEGWNRPIGRHDPTAHAEIMALRQGGLVL 110

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  LYVTLEPC MCA A+   RI  L +GA + K G + +          +H  
Sbjct: 111 QNYRLLDTTLYVTLEPCVMCAGAMVHGRIGTLVFGARDAKTGAVGSLMDITGHPGMNHQV 170

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           ++  GI       ++  FF++RR
Sbjct: 171 QVIEGILATECSAMLSAFFRQRR 193


>gi|313886388|ref|ZP_07820111.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Porphyromonas asaccharolytica PR426713P-I]
 gi|332300169|ref|YP_004442090.1| CMP/dCMP deaminase zinc-binding protein [Porphyromonas
           asaccharolytica DSM 20707]
 gi|312924164|gb|EFR34950.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Porphyromonas asaccharolytica PR426713P-I]
 gi|332177232|gb|AEE12922.1| CMP/dCMP deaminase zinc-binding protein [Porphyromonas
           asaccharolytica DSM 20707]
          Length = 153

 Score =  100 bits (248), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 51/143 (35%), Positives = 83/143 (58%), Gaps = 5/143 (3%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
            M  AL++A  A   +E+P+GAV  +  +I++++ N+   L D TAHAE+LAI      +
Sbjct: 15  MMQLALQQALVAYEADEVPIGAVIAVGTRILAKSHNQVELLNDPTAHAEMLAITQATAAI 74

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
             + LP+  LYVT+EPC MC  A+   +I R+ YG ++PKGG +      Y+ A  H   
Sbjct: 75  GGKYLPQCTLYVTVEPCPMCMGALRWTQIGRIVYGTADPKGGYMH-----YSDALPHPKS 129

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
            I  G+ E+  R+++  +F+ +R
Sbjct: 130 IIVGGVCEEECRELMVSYFRRKR 152


>gi|76799055|ref|ZP_00781248.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus
           agalactiae 18RS21]
 gi|76585592|gb|EAO62157.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus
           agalactiae 18RS21]
          Length = 168

 Score =  100 bits (248), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 54/143 (37%), Positives = 79/143 (55%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM+ AL+ A+++  + EIP+G V V +  II R  N   E      HAEI+AI      +
Sbjct: 12  FMTEALKXAKSSLEKEEIPIGCVIVKDGHIIGRGHNAREEFNKAILHAEIMAINNANEKV 71

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  L+VT+EPC MC+ AI LARI  + YGA N K G   +     + +  +H  
Sbjct: 72  GNWRLLDTTLFVTVEPCVMCSGAIGLARIPHVIYGAKNTKFGAAGSLYDILSDSRLNHRV 131

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+  GI E +  +I+QDFF++ R
Sbjct: 132 EVETGILEDQCAKIMQDFFRKGR 154


>gi|153824574|ref|ZP_01977241.1| zinc-binding domain protein [Vibrio cholerae MZO-2]
 gi|149741792|gb|EDM55821.1| zinc-binding domain protein [Vibrio cholerae MZO-2]
          Length = 193

 Score =  100 bits (248), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 55/143 (38%), Positives = 78/143 (54%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  A+  A  A  + E+PVGAV V + +II+   N +    D TAHAEI  IR   + L
Sbjct: 31  FMRRAIVLAAQAEAQGEVPVGAVLVRDGEIIAEGWNGSITNHDATAHAEIEVIRKAGKAL 90

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
           S   L +  LYVTLEPC MCA A+  +R++R+ YGA + K G        ++    +H  
Sbjct: 91  SNYRLLDTTLYVTLEPCPMCAGALLHSRVKRIVYGAPDLKAGAAGTVLDLFSSQAAYHYA 150

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
            +  G+ E+  R  +Q FF+ RR
Sbjct: 151 TVEKGLLEEECRAQLQAFFQRRR 173


>gi|288929641|ref|ZP_06423485.1| cytidine/deoxycytidylate deaminase family protein [Prevotella sp.
           oral taxon 317 str. F0108]
 gi|288329146|gb|EFC67733.1| cytidine/deoxycytidylate deaminase family protein [Prevotella sp.
           oral taxon 317 str. F0108]
          Length = 144

 Score =  100 bits (248), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 53/149 (35%), Positives = 80/149 (53%), Gaps = 5/149 (3%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M+     M  AL+EA+ A  + E+P+GAV     ++++RA N    L DVTAHAE+ AI 
Sbjct: 1   MQVDEQMMRKALDEARQALAQGEVPIGAVIACKGRVVARAHNLTETLCDVTAHAEMQAIT 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
               +L  + LPE  LYVT+EPC MCA A   A++ R+ YG  + K      G + +   
Sbjct: 61  AAANMLGGKYLPECTLYVTVEPCPMCAGACGWAQLGRIVYGTRDEK-----RGYERFAPN 115

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             H    +  G+ E+  R++++ FF   R
Sbjct: 116 VLHAKATVTAGVLEEECRELMKSFFSGLR 144


>gi|290581189|ref|YP_003485581.1| putative deaminase [Streptococcus mutans NN2025]
 gi|254998088|dbj|BAH88689.1| putative deaminase [Streptococcus mutans NN2025]
          Length = 156

 Score =  100 bits (248), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 58/143 (40%), Positives = 78/143 (54%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  AL+EAQ +  + EIP+G V V + +II    N   E      HAEI+AI    R  
Sbjct: 12  FMGEALKEAQLSLQKEEIPIGCVIVKDGQIIGCGHNAREEENLAIMHAEIMAINQANRTQ 71

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  L+VT+EPC MC+ AI LARI ++ YGA N K GG  +     T    +H  
Sbjct: 72  ESWRLLDCTLFVTIEPCIMCSGAIGLARIPQVIYGAKNAKFGGAGSLYDILTDERLNHRV 131

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+  GI E+   Q++Q FF+ RR
Sbjct: 132 EVERGILEKECAQMMQSFFRYRR 154


>gi|307249782|ref|ZP_07531760.1| tRNA-specific adenosine deaminase [Actinobacillus pleuropneumoniae
           serovar 4 str. M62]
 gi|306858197|gb|EFM90275.1| tRNA-specific adenosine deaminase [Actinobacillus pleuropneumoniae
           serovar 4 str. M62]
          Length = 196

 Score =  100 bits (248), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 61/140 (43%), Positives = 78/140 (55%), Gaps = 1/140 (0%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           FM  ALE A  A +  EIPVGAV V     II    N+  +L D +AHAE+LAIR   ++
Sbjct: 43  FMQYALELADRAEVIGEIPVGAVLVDQEGNIIGEGWNQVIQLSDPSAHAEMLAIRQAGKV 102

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
                L +  LYVTLEPCTMCA AI  +R+RRL +GAS+ K G I +    +     +H 
Sbjct: 103 QRNYRLLDCTLYVTLEPCTMCAGAILHSRLRRLVFGASDYKTGAIGSRFHLFEDYKMNHF 162

Query: 126 PEIYPGISEQRSRQIIQDFF 145
            EI  G+  +   Q I  FF
Sbjct: 163 LEIRGGVLAEECSQKISRFF 182


>gi|159028687|emb|CAO88158.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
          Length = 143

 Score =  100 bits (248), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 58/143 (40%), Positives = 78/143 (54%), Gaps = 1/143 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  AL  A  A  R ++PVGAV V     +I++  N   +  D TAHAEILAIR   ++L
Sbjct: 1   MQLALNLAATAGDRGDVPVGAVIVDKQGHLIAQGANCKEKHHDPTAHAEILAIRAASQVL 60

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L    LYVTLEPC MCA AI  AR+  L YGA +PK G I     F      +H  
Sbjct: 61  GNWHLNGCTLYVTLEPCPMCAGAIIQARLGLLVYGADDPKTGVIRTVANFMDSPFSNHRL 120

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
            +  GI  + S +++Q +F+++R
Sbjct: 121 PVIAGILAKESGELLQTWFEKKR 143


>gi|119509443|ref|ZP_01628591.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [Nodularia
           spumigena CCY9414]
 gi|119465849|gb|EAW46738.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [Nodularia
           spumigena CCY9414]
          Length = 150

 Score =  100 bits (248), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 59/143 (41%), Positives = 77/143 (53%), Gaps = 1/143 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           MS AL+ AQ A    E+PVGAV +     +I+   NR    +D TAHAEI+A+R     L
Sbjct: 1   MSRALDLAQIAGDAGEVPVGAVIIDAGGNMIAEGENRKERDQDPTAHAEIIALRAAANSL 60

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  LYVTLEPC MCA AI  AR+++L YG  + K G I   T     A  +H  
Sbjct: 61  HNWRLNQCTLYVTLEPCPMCAGAIVQARLQQLVYGVDDTKTGAIRTVTNIPDGAASNHRL 120

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
            +  G+ E   RQ +Q +F  RR
Sbjct: 121 RVMGGVLESTCRQQLQTWFANRR 143


>gi|160871633|ref|ZP_02061765.1| tRNA-specific adenosine deaminase [Rickettsiella grylli]
 gi|159120432|gb|EDP45770.1| tRNA-specific adenosine deaminase [Rickettsiella grylli]
          Length = 160

 Score =  100 bits (248), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 53/148 (35%), Positives = 86/148 (58%), Gaps = 2/148 (1%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           ++   +M  AL +A +A   +E+P+GA+ V N+ +I+ A N+     D TAHAEI+ ++ 
Sbjct: 10  QRDTAYMQLALNQAAHAKRSHEVPIGAILVWNDHVIATAYNQTLTRCDPTAHAEIVVLQE 69

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
             + L    L +  LYVTLEPC MC  A+  ARI+RL +GA + + G I +  Q + L  
Sbjct: 70  TAKQLKNHRLLDATLYVTLEPCLMCVGAMIQARIKRLVFGAYDARLGTIMH--QLHRLKG 127

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +HS E+  G+  +   + ++ FFK +R
Sbjct: 128 LNHSFEVAEGVLSEACSKELKQFFKYKR 155


>gi|28897437|ref|NP_797042.1| YfhC protein [Vibrio parahaemolyticus RIMD 2210633]
 gi|28805649|dbj|BAC58926.1| YfhC protein [Vibrio parahaemolyticus RIMD 2210633]
          Length = 161

 Score =  100 bits (248), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 54/142 (38%), Positives = 77/142 (54%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  AL  A+ A L  E+PVGAV V + ++I+   NR+    D TAHAEI  +R    +L 
Sbjct: 1   MRRALALAEQAELEGEVPVGAVLVKDGEVIAEGWNRSICSHDATAHAEIQTLRNAGAVLE 60

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
              L +  LYVTLEPC MCA A+  +R++R+ +GA + K G        +     +H   
Sbjct: 61  NYRLLDTTLYVTLEPCPMCAGALLHSRVKRVVFGAPDLKAGAAGTVLNLFESQAAYHYAT 120

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
           +  G+ E   R+ +Q FFK RR
Sbjct: 121 VEKGLLEDECREQLQAFFKRRR 142


>gi|88858578|ref|ZP_01133220.1| hypothetical protein PTD2_14349 [Pseudoalteromonas tunicata D2]
 gi|88820195|gb|EAR30008.1| hypothetical protein PTD2_14349 [Pseudoalteromonas tunicata D2]
          Length = 165

 Score =  100 bits (248), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 56/149 (37%), Positives = 80/149 (53%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           MK    +M  AL  A  A    EIPVGA+ V  ++II+   NR+    D +AHAE+LAIR
Sbjct: 1   MKSDEYWMQQALLRADKAEAEGEIPVGAIVVYQDEIIAEGWNRSIISHDPSAHAEMLAIR 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
                L    + +  LYVTLEPC MCA A+  +R++R+ YGA + K G +++       +
Sbjct: 61  NAGIALQNYRMIDCTLYVTLEPCAMCAGALVHSRMKRVVYGADDLKTGAVKSVMNIVQHS 120

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  E+  G+  Q     +  FFK RR
Sbjct: 121 QFNHQLEVTEGVLAQECGLRLSAFFKRRR 149


>gi|240145078|ref|ZP_04743679.1| tRNA-specific adenosine deaminase [Roseburia intestinalis L1-82]
 gi|257202749|gb|EEV01034.1| tRNA-specific adenosine deaminase [Roseburia intestinalis L1-82]
 gi|291537828|emb|CBL10939.1| Cytosine/adenosine deaminases [Roseburia intestinalis XB6B4]
          Length = 154

 Score = 99.8 bits (247), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 52/149 (34%), Positives = 80/149 (53%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M +   +M  A+ +A+ A   +E+P+G V V N+KII+R  NR     +  AHAE+ AIR
Sbjct: 1   MNQDEKYMKAAIRQAKKAYALDEVPIGCVIVQNDKIIARGYNRRNTEGNTLAHAELTAIR 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              +      L +  +YVTLEPC MCA AI  +R++++  G+ NPK G   +      + 
Sbjct: 61  KASKKTGDWRLEDCTMYVTLEPCQMCAGAIVQSRMKKVVIGSMNPKAGCAGSVLNLLQMQ 120

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  EI  G+  +    ++  FFKE R
Sbjct: 121 QFNHQVEIEKGVLGEECSAMLSTFFKELR 149


>gi|163814785|ref|ZP_02206174.1| hypothetical protein COPEUT_00936 [Coprococcus eutactus ATCC 27759]
 gi|158450420|gb|EDP27415.1| hypothetical protein COPEUT_00936 [Coprococcus eutactus ATCC 27759]
          Length = 181

 Score = 99.8 bits (247), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 54/143 (37%), Positives = 77/143 (53%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  AL +A+ A    ++P+G V V   KII+R  N+    K   AHAEILAI    + L
Sbjct: 32  YMDKALAQARRAYANGDVPIGCVIVHEGKIIARGFNKRNLKKTTLAHAEILAIEQASKKL 91

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L E  +YVTLEPC MCA AI  ARI ++  G  NPK G   +      +   +H  
Sbjct: 92  GDWRLEECTMYVTLEPCQMCAGAIVQARIPKVVIGCMNPKAGCAGSIINLLQMQQFNHQV 151

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           ++  G+ EQ    ++++FFK+ R
Sbjct: 152 DVIRGVREQECSGMMKEFFKDLR 174


>gi|90416322|ref|ZP_01224254.1| cytidine/deoxycytidylate deaminase family protein [marine gamma
           proteobacterium HTCC2207]
 gi|90332047|gb|EAS47261.1| cytidine/deoxycytidylate deaminase family protein [marine gamma
           proteobacterium HTCC2207]
          Length = 160

 Score = 99.8 bits (247), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 53/143 (37%), Positives = 79/143 (55%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  A+E A  AA   E+PVGA+ V   ++I    N+     D T HAEI+A+R   + L
Sbjct: 7   FMGRAMELAHQAAAVGEVPVGALVVKEGRVIGEGYNQPITSCDPTGHAEIIAMRNAAQTL 66

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L   DLYVT+EPCTMC  A+  ARI ++ +GA  P+ G +E+  +    +  +HS 
Sbjct: 67  GNYRLSGCDLYVTIEPCTMCVGAMVHARIGKIVFGAKEPRAGALESQLRLMDESHYNHSI 126

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E   G+  ++   I+  FF+ +R
Sbjct: 127 EWQGGVLAEQCGAIMSGFFRAKR 149


>gi|24378807|ref|NP_720762.1| putative deaminase [Streptococcus mutans UA159]
 gi|24376681|gb|AAN58068.1|AE014879_5 putative deaminase [Streptococcus mutans UA159]
          Length = 156

 Score = 99.8 bits (247), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 58/143 (40%), Positives = 78/143 (54%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  AL+EAQ +  + EIP+G V V + +II    N   E      HAEI+AI    R  
Sbjct: 12  FMGEALKEAQLSLQKEEIPIGCVIVKDGQIIGCGHNAREEENLAIMHAEIMAINQANRTQ 71

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  L+VT+EPC MC+ AI LARI ++ YGA N K GG  +     T    +H  
Sbjct: 72  ESWRLLDCTLFVTIEPCIMCSGAIGLARIPQVIYGAKNAKFGGAGSLYDILTDERLNHRV 131

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+  GI E+   Q++Q FF+ RR
Sbjct: 132 EVERGILEKECAQMMQSFFRYRR 154


>gi|281179608|dbj|BAI55938.1| putative deaminase [Escherichia coli SE15]
          Length = 178

 Score = 99.8 bits (247), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 56/143 (39%), Positives = 77/143 (53%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  A+  A+ A    E+PVGAV V NN++I    NR     D TAHAEI+A+R G  ++
Sbjct: 22  WMRHAMTLAKRAWDEREVPVGAVLVHNNRVIGEGWNRPIGRHDPTAHAEIMALRQGGLVM 81

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  LYVTLEPC MCA A+  +RI R+ +GA + K G   +          +H  
Sbjct: 82  QNYRLIDATLYVTLEPCVMCAGAMIHSRIGRVVFGARDAKTGAAGSLMDVLHHPGMNHRV 141

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           EI  GI       ++ DFF+ RR
Sbjct: 142 EITEGILADECAALLSDFFRMRR 164


>gi|218440469|ref|YP_002378798.1| CMP/dCMP deaminase zinc-binding [Cyanothece sp. PCC 7424]
 gi|218173197|gb|ACK71930.1| CMP/dCMP deaminase zinc-binding [Cyanothece sp. PCC 7424]
          Length = 162

 Score = 99.8 bits (247), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 56/144 (38%), Positives = 76/144 (52%), Gaps = 1/144 (0%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNN-KIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           +MS A+  AQ AA   ++PVGAV +    K+I+   NR    +D TAHAEI+ +R   ++
Sbjct: 19  WMSRAITLAQEAAQAGDVPVGAVIIDEKGKLIAEGSNRKERDQDPTAHAEIIVLRRASQV 78

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           L    L +  LYVTLEPC MC  AI  ARI  L YG  +PK G I            +H 
Sbjct: 79  LQTWHLQQCKLYVTLEPCPMCTGAIIQARIALLIYGVDDPKTGTIRTVANLPDSPCSNHR 138

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
             +  GI E   R  +Q +F ++R
Sbjct: 139 LSVISGIMESACRHQLQTWFAQKR 162


>gi|168757783|ref|ZP_02782790.1| tRNA-specific adenosine deaminase [Escherichia coli O157:H7 str.
           EC4401]
 gi|168768660|ref|ZP_02793667.1| tRNA-specific adenosine deaminase [Escherichia coli O157:H7 str.
           EC4486]
 gi|188024727|ref|ZP_02773396.2| tRNA-specific adenosine deaminase [Escherichia coli O157:H7 str.
           EC4113]
 gi|189403941|ref|ZP_02786184.2| tRNA-specific adenosine deaminase [Escherichia coli O157:H7 str.
           EC4501]
 gi|195936706|ref|ZP_03082088.1| tRNA-specific adenosine deaminase [Escherichia coli O157:H7 str.
           EC4024]
 gi|208806459|ref|ZP_03248796.1| tRNA-specific adenosine deaminase [Escherichia coli O157:H7 str.
           EC4206]
 gi|208812941|ref|ZP_03254270.1| tRNA-specific adenosine deaminase [Escherichia coli O157:H7 str.
           EC4045]
 gi|208820370|ref|ZP_03260690.1| tRNA-specific adenosine deaminase [Escherichia coli O157:H7 str.
           EC4042]
 gi|209400171|ref|YP_002272033.1| tRNA-specific adenosine deaminase [Escherichia coli O157:H7 str.
           EC4115]
 gi|215487903|ref|YP_002330334.1| tRNA-specific adenosine deaminase [Escherichia coli O127:H6 str.
           E2348/69]
 gi|217327122|ref|ZP_03443205.1| tRNA-specific adenosine deaminase [Escherichia coli O157:H7 str.
           TW14588]
 gi|254794508|ref|YP_003079345.1| tRNA-specific adenosine deaminase [Escherichia coli O157:H7 str.
           TW14359]
 gi|261223005|ref|ZP_05937286.1| tRNA-specific adenosine deaminase [Escherichia coli O157:H7 str.
           FRIK2000]
 gi|261259444|ref|ZP_05951977.1| tRNA-specific adenosine deaminase [Escherichia coli O157:H7 str.
           FRIK966]
 gi|306814377|ref|ZP_07448539.1| tRNA-specific adenosine deaminase [Escherichia coli NC101]
 gi|150421686|sp|Q8XA44|TADA_ECO57 RecName: Full=tRNA-specific adenosine deaminase
 gi|150421687|sp|Q8FF24|TADA_ECOL6 RecName: Full=tRNA-specific adenosine deaminase
 gi|188017152|gb|EDU55274.1| tRNA-specific adenosine deaminase [Escherichia coli O157:H7 str.
           EC4113]
 gi|189355294|gb|EDU73713.1| tRNA-specific adenosine deaminase [Escherichia coli O157:H7 str.
           EC4401]
 gi|189362211|gb|EDU80630.1| tRNA-specific adenosine deaminase [Escherichia coli O157:H7 str.
           EC4486]
 gi|189368357|gb|EDU86773.1| tRNA-specific adenosine deaminase [Escherichia coli O157:H7 str.
           EC4501]
 gi|208726260|gb|EDZ75861.1| tRNA-specific adenosine deaminase [Escherichia coli O157:H7 str.
           EC4206]
 gi|208734218|gb|EDZ82905.1| tRNA-specific adenosine deaminase [Escherichia coli O157:H7 str.
           EC4045]
 gi|208740493|gb|EDZ88175.1| tRNA-specific adenosine deaminase [Escherichia coli O157:H7 str.
           EC4042]
 gi|209161571|gb|ACI39004.1| tRNA-specific adenosine deaminase [Escherichia coli O157:H7 str.
           EC4115]
 gi|215265975|emb|CAS10384.1| tRNA-specific adenosine deaminase [Escherichia coli O127:H6 str.
           E2348/69]
 gi|217319489|gb|EEC27914.1| tRNA-specific adenosine deaminase [Escherichia coli O157:H7 str.
           TW14588]
 gi|254593908|gb|ACT73269.1| tRNA-specific adenosine deaminase [Escherichia coli O157:H7 str.
           TW14359]
 gi|305851771|gb|EFM52223.1| tRNA-specific adenosine deaminase [Escherichia coli NC101]
 gi|312947130|gb|ADR27957.1| tRNA-specific adenosine deaminase [Escherichia coli O83:H1 str. NRG
           857C]
 gi|320180559|gb|EFW55490.1| tRNA-specific adenosine-34 deaminase [Shigella boydii ATCC 9905]
 gi|320188900|gb|EFW63559.1| tRNA-specific adenosine-34 deaminase [Escherichia coli O157:H7 str.
           EC1212]
 gi|320640908|gb|EFX10396.1| tRNA-specific adenosine deaminase [Escherichia coli O157:H7 str.
           G5101]
 gi|320646350|gb|EFX15277.1| tRNA-specific adenosine deaminase [Escherichia coli O157:H- str.
           493-89]
 gi|320651530|gb|EFX19917.1| tRNA-specific adenosine deaminase [Escherichia coli O157:H- str. H
           2687]
 gi|320657241|gb|EFX25050.1| tRNA-specific adenosine deaminase [Escherichia coli O55:H7 str.
           3256-97 TW 07815]
 gi|320662847|gb|EFX30179.1| tRNA-specific adenosine deaminase [Escherichia coli O55:H7 str.
           USDA 5905]
 gi|320667651|gb|EFX34566.1| tRNA-specific adenosine deaminase [Escherichia coli O157:H7 str.
           LSU-61]
 gi|323955795|gb|EGB51553.1| cytidine and deoxycytidylate deaminase zinc-binding protein
           [Escherichia coli H263]
 gi|323968007|gb|EGB63419.1| cytidine and deoxycytidylate deaminase zinc-binding protein
           [Escherichia coli M863]
 gi|326340365|gb|EGD64169.1| tRNA-specific adenosine-34 deaminase [Escherichia coli O157:H7 str.
           1125]
 gi|332088011|gb|EGI93136.1| tRNA-specific adenosine deaminase [Shigella boydii 5216-82]
 gi|332089781|gb|EGI94882.1| tRNA-specific adenosine deaminase [Shigella dysenteriae 155-74]
          Length = 167

 Score = 99.8 bits (247), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 56/143 (39%), Positives = 77/143 (53%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  A+  A+ A    E+PVGAV V NN++I    NR     D TAHAEI+A+R G  ++
Sbjct: 11  WMRHAMTLAKRAWDEREVPVGAVLVHNNRVIGEGWNRPIGRHDPTAHAEIMALRQGGLVM 70

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  LYVTLEPC MCA A+  +RI R+ +GA + K G   +          +H  
Sbjct: 71  QNYRLIDATLYVTLEPCVMCAGAMIHSRIGRVVFGARDAKTGAAGSLMDVLHHPGMNHRV 130

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           EI  GI       ++ DFF+ RR
Sbjct: 131 EITEGILADECAALLSDFFRMRR 153


>gi|282600107|ref|ZP_05973017.2| tRNA-specific adenosine deaminase [Providencia rustigianii DSM
           4541]
 gi|282566416|gb|EFB71951.1| tRNA-specific adenosine deaminase [Providencia rustigianii DSM
           4541]
          Length = 176

 Score = 99.8 bits (247), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 56/143 (39%), Positives = 81/143 (56%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M+ A+E A+ A    EIPVGA+ V +N++I+   N + E  D TAHAEI+ ++   +IL
Sbjct: 19  WMAQAIELAKQAQDIGEIPVGALLVKDNQLIATGWNHSIEQHDPTAHAEIITLQQAGKIL 78

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  LYVTLEPC MCA A+  +RI R+ YGA + K G   +       A  +H  
Sbjct: 79  KNYRLLDTTLYVTLEPCIMCAGAMIHSRIGRVVYGAKDFKTGACGSFINIMGQAGLNHYV 138

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           ++  GI E     ++  FFK RR
Sbjct: 139 DVTGGILEDVCSSMLSAFFKMRR 161


>gi|218701072|ref|YP_002408701.1| tRNA-specific adenosine deaminase [Escherichia coli IAI39]
 gi|218371058|emb|CAR18885.1| tRNA-specific adenosine deaminase [Escherichia coli IAI39]
          Length = 178

 Score = 99.8 bits (247), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 56/143 (39%), Positives = 77/143 (53%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  A+  A+ A    E+PVGAV V NN++I    NR     D TAHAEI+A+R G  ++
Sbjct: 22  WMRHAMTLAKRAWDEREVPVGAVLVHNNRVIGEGWNRPIGRHDPTAHAEIMALRQGGLVM 81

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  LYVTLEPC MCA A+  +RI R+ +GA + K G   +          +H  
Sbjct: 82  QNYRLIDATLYVTLEPCVMCAGAMIHSRIGRVVFGARDAKTGAAGSLMDVLHHPGMNHRV 141

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           EI  GI       ++ DFF+ RR
Sbjct: 142 EIIEGILADECAALLSDFFRMRR 164


>gi|15803084|ref|NP_289115.1| tRNA-specific adenosine deaminase [Escherichia coli O157:H7 EDL933]
 gi|15832679|ref|NP_311452.1| tRNA-specific adenosine deaminase [Escherichia coli O157:H7 str.
           Sakai]
 gi|82777934|ref|YP_404283.1| tRNA-specific adenosine deaminase [Shigella dysenteriae Sd197]
 gi|91211884|ref|YP_541870.1| tRNA-specific adenosine deaminase [Escherichia coli UTI89]
 gi|110642721|ref|YP_670451.1| tRNA-specific adenosine deaminase [Escherichia coli 536]
 gi|117624781|ref|YP_853694.1| tRNA-specific adenosine deaminase [Escherichia coli APEC O1]
 gi|187775816|ref|ZP_02798525.2| tRNA-specific adenosine deaminase [Escherichia coli O157:H7 str.
           EC4196]
 gi|189009982|ref|ZP_02803540.2| tRNA-specific adenosine deaminase [Escherichia coli O157:H7 str.
           EC4076]
 gi|189405037|ref|ZP_02812923.2| tRNA-specific adenosine deaminase [Escherichia coli O157:H7 str.
           EC869]
 gi|189405736|ref|ZP_02823945.2| tRNA-specific adenosine deaminase [Escherichia coli O157:H7 str.
           EC508]
 gi|191172647|ref|ZP_03034186.1| tRNA-specific adenosine deaminase [Escherichia coli F11]
 gi|194432153|ref|ZP_03064442.1| tRNA-specific adenosine deaminase [Shigella dysenteriae 1012]
 gi|218559479|ref|YP_002392392.1| tRNA-specific adenosine deaminase [Escherichia coli S88]
 gi|218690674|ref|YP_002398886.1| tRNA-specific adenosine deaminase [Escherichia coli ED1a]
 gi|237705067|ref|ZP_04535548.1| tRNA-specific adenosine deaminase [Escherichia sp. 3_2_53FAA]
 gi|291283784|ref|YP_003500602.1| tRNA-specific adenosine deaminase [Escherichia coli O55:H7 str.
           CB9615]
 gi|293415828|ref|ZP_06658471.1| tRNA-specific adenosine deaminase [Escherichia coli B185]
 gi|300935691|ref|ZP_07150661.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Escherichia coli MS 21-1]
 gi|300974171|ref|ZP_07172489.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Escherichia coli MS 200-1]
 gi|309784689|ref|ZP_07679322.1| tRNA-specific adenosine deaminase [Shigella dysenteriae 1617]
 gi|331648252|ref|ZP_08349342.1| tRNA-specific adenosine deaminase [Escherichia coli M605]
 gi|331653994|ref|ZP_08354995.1| tRNA-specific adenosine deaminase [Escherichia coli M718]
 gi|331658703|ref|ZP_08359647.1| tRNA-specific adenosine deaminase [Escherichia coli TA206]
 gi|12516972|gb|AAG57673.1|AE005486_4 putative deaminase [Escherichia coli O157:H7 str. EDL933]
 gi|13362896|dbj|BAB36848.1| putative deaminase [Escherichia coli O157:H7 str. Sakai]
 gi|81242082|gb|ABB62792.1| putative deaminase [Shigella dysenteriae Sd197]
 gi|91073458|gb|ABE08339.1| putative deaminase [Escherichia coli UTI89]
 gi|110344313|gb|ABG70550.1| hypothetical protein YfhC [Escherichia coli 536]
 gi|115513905|gb|ABJ01980.1| tRNA-specific adenosine deaminase [Escherichia coli APEC O1]
 gi|187770595|gb|EDU34439.1| tRNA-specific adenosine deaminase [Escherichia coli O157:H7 str.
           EC4196]
 gi|189003519|gb|EDU72505.1| tRNA-specific adenosine deaminase [Escherichia coli O157:H7 str.
           EC4076]
 gi|189372298|gb|EDU90714.1| tRNA-specific adenosine deaminase [Escherichia coli O157:H7 str.
           EC869]
 gi|189378592|gb|EDU97008.1| tRNA-specific adenosine deaminase [Escherichia coli O157:H7 str.
           EC508]
 gi|190907120|gb|EDV66720.1| tRNA-specific adenosine deaminase [Escherichia coli F11]
 gi|194419682|gb|EDX35762.1| tRNA-specific adenosine deaminase [Shigella dysenteriae 1012]
 gi|209762958|gb|ACI79791.1| putative deaminase [Escherichia coli]
 gi|209762960|gb|ACI79792.1| putative deaminase [Escherichia coli]
 gi|209762962|gb|ACI79793.1| putative deaminase [Escherichia coli]
 gi|209762964|gb|ACI79794.1| putative deaminase [Escherichia coli]
 gi|209762966|gb|ACI79795.1| putative deaminase [Escherichia coli]
 gi|218366248|emb|CAR03995.1| tRNA-specific adenosine deaminase [Escherichia coli S88]
 gi|218428238|emb|CAR09014.1| tRNA-specific adenosine deaminase [Escherichia coli ED1a]
 gi|222034264|emb|CAP77005.1| tRNA-specific adenosine deaminase [Escherichia coli LF82]
 gi|226901433|gb|EEH87692.1| tRNA-specific adenosine deaminase [Escherichia sp. 3_2_53FAA]
 gi|290763657|gb|ADD57618.1| tRNA-specific adenosine deaminase [Escherichia coli O55:H7 str.
           CB9615]
 gi|291433476|gb|EFF06455.1| tRNA-specific adenosine deaminase [Escherichia coli B185]
 gi|294489520|gb|ADE88276.1| tRNA-specific adenosine deaminase [Escherichia coli IHE3034]
 gi|300308910|gb|EFJ63430.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Escherichia coli MS 200-1]
 gi|300459125|gb|EFK22618.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Escherichia coli MS 21-1]
 gi|307625893|gb|ADN70197.1| tRNA-specific adenosine deaminase [Escherichia coli UM146]
 gi|308927059|gb|EFP72533.1| tRNA-specific adenosine deaminase [Shigella dysenteriae 1617]
 gi|315288035|gb|EFU47437.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Escherichia coli MS 110-3]
 gi|315300515|gb|EFU59744.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Escherichia coli MS 16-3]
 gi|323188326|gb|EFZ73618.1| tRNA-specific adenosine deaminase [Escherichia coli RN587/1]
 gi|323949213|gb|EGB45104.1| cytidine and deoxycytidylate deaminase zinc-binding protein
           [Escherichia coli H252]
 gi|324013577|gb|EGB82796.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Escherichia coli MS 60-1]
 gi|326345048|gb|EGD68792.1| tRNA-specific adenosine-34 deaminase [Escherichia coli O157:H7 str.
           1044]
 gi|327252269|gb|EGE63941.1| tRNA-specific adenosine deaminase [Escherichia coli STEC_7v]
 gi|330912330|gb|EGH40840.1| tRNA-specific adenosine-34 deaminase [Escherichia coli AA86]
 gi|331043112|gb|EGI15252.1| tRNA-specific adenosine deaminase [Escherichia coli M605]
 gi|331048843|gb|EGI20919.1| tRNA-specific adenosine deaminase [Escherichia coli M718]
 gi|331054368|gb|EGI26395.1| tRNA-specific adenosine deaminase [Escherichia coli TA206]
          Length = 178

 Score = 99.8 bits (247), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 56/143 (39%), Positives = 77/143 (53%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  A+  A+ A    E+PVGAV V NN++I    NR     D TAHAEI+A+R G  ++
Sbjct: 22  WMRHAMTLAKRAWDEREVPVGAVLVHNNRVIGEGWNRPIGRHDPTAHAEIMALRQGGLVM 81

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  LYVTLEPC MCA A+  +RI R+ +GA + K G   +          +H  
Sbjct: 82  QNYRLIDATLYVTLEPCVMCAGAMIHSRIGRVVFGARDAKTGAAGSLMDVLHHPGMNHRV 141

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           EI  GI       ++ DFF+ RR
Sbjct: 142 EITEGILADECAALLSDFFRMRR 164


>gi|221233170|ref|YP_002515606.1| tRNA-specific adenosine deaminase [Caulobacter crescentus NA1000]
 gi|220962342|gb|ACL93698.1| tRNA-specific adenosine deaminase [Caulobacter crescentus NA1000]
          Length = 148

 Score = 99.8 bits (247), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 57/130 (43%), Positives = 77/130 (59%), Gaps = 2/130 (1%)

Query: 22  NEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVT 79
            E PVGAV +     ++I+ AGN      D TAHAEI A+R     L    L ++ L VT
Sbjct: 15  GETPVGAVILDPSTGEVIATAGNGPIAAHDPTAHAEIAAMRAAAAKLGNYRLTDLTLVVT 74

Query: 80  LEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139
           LEPC MCA AIS ARI R+ +GA +PKGG + +G +F+   TCH  PE+  G+    S  
Sbjct: 75  LEPCAMCAGAISHARIGRVVFGADDPKGGAVVHGPKFFAQPTCHWRPEVTGGVLADESAD 134

Query: 140 IIQDFFKERR 149
           +++ FF+ RR
Sbjct: 135 LLRGFFRARR 144


>gi|218706062|ref|YP_002413581.1| tRNA -specific adenosine deaminase [Escherichia coli UMN026]
 gi|293406001|ref|ZP_06649993.1| tRNA-specific adenosine deaminase [Escherichia coli FVEC1412]
 gi|298381801|ref|ZP_06991400.1| tRNA-specific adenosine deaminase [Escherichia coli FVEC1302]
 gi|300898326|ref|ZP_07116674.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Escherichia coli MS 198-1]
 gi|218433159|emb|CAR14055.1| tRNA-specific adenosine deaminase [Escherichia coli UMN026]
 gi|284922509|emb|CBG35596.1| tRNA-specific adenosine deaminase [Escherichia coli 042]
 gi|291428209|gb|EFF01236.1| tRNA-specific adenosine deaminase [Escherichia coli FVEC1412]
 gi|298279243|gb|EFI20757.1| tRNA-specific adenosine deaminase [Escherichia coli FVEC1302]
 gi|300357988|gb|EFJ73858.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Escherichia coli MS 198-1]
          Length = 178

 Score = 99.8 bits (247), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 56/143 (39%), Positives = 77/143 (53%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  A+  A+ A    E+PVGAV V NN++I    NR     D TAHAEI+A+R G  ++
Sbjct: 22  WMRHAMTLAKRAWDEREVPVGAVLVHNNRVIGEGWNRPIGRHDPTAHAEIMALRQGGLVM 81

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  LYVTLEPC MCA A+  +RI R+ +GA + K G   +          +H  
Sbjct: 82  QNYRLIDATLYVTLEPCVMCAGAMIHSRIGRVVFGARDAKTGAAGSLMDVLHHPGMNHRV 141

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           EI  GI       ++ DFF+ RR
Sbjct: 142 EITEGILADECAALLSDFFRMRR 164


>gi|297616226|ref|YP_003701385.1| CMP/dCMP deaminase zinc-binding protein [Syntrophothermus
           lipocalidus DSM 12680]
 gi|297144063|gb|ADI00820.1| CMP/dCMP deaminase zinc-binding protein [Syntrophothermus
           lipocalidus DSM 12680]
          Length = 155

 Score = 99.8 bits (247), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 54/143 (37%), Positives = 79/143 (55%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  A+E    A  + E+PVGAV V N +IIS A N   + +D TAHAE+LAI+   + L
Sbjct: 10  FMRRAVELGWAAFHQGEVPVGAVVVKNGEIISSAHNEKEKRQDATAHAEMLAIQRASQAL 69

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  LY T+EPC MCA AI  ARI+++ +GA + K G   +          +H  
Sbjct: 70  GTWRLQDTTLYSTIEPCPMCAGAIVQARIKKVVFGARDLKAGAGGSLINVLDFPGLNHRV 129

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+  G+ E    +++ +FF+  R
Sbjct: 130 EVIEGVLEDECTELMTEFFRRLR 152


>gi|213157131|ref|YP_002319176.1| tRNA-specific adenosine deaminase [Acinetobacter baumannii AB0057]
 gi|215483589|ref|YP_002325810.1| tRNA-specific adenosine deaminase [Acinetobacter baumannii
           AB307-0294]
 gi|239502187|ref|ZP_04661497.1| putative deaminase [Acinetobacter baumannii AB900]
 gi|301345934|ref|ZP_07226675.1| putative deaminase [Acinetobacter baumannii AB056]
 gi|213056291|gb|ACJ41193.1| tRNA-specific adenosine deaminase [Acinetobacter baumannii AB0057]
 gi|213987060|gb|ACJ57359.1| tRNA-specific adenosine deaminase [Acinetobacter baumannii
           AB307-0294]
          Length = 158

 Score = 99.8 bits (247), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 59/139 (42%), Positives = 74/139 (53%), Gaps = 1/139 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  A E+A+ AA + EIPVGAV V  NK+I    N    L D TAHAEI AIR  C  L 
Sbjct: 1   MQLAYEQAELAAKQGEIPVGAVIVSQNKLIGAGFNAPIGLSDPTAHAEIQAIRAACESLK 60

Query: 68  QEILPE-VDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
              LPE   LYVTLEPCTMC  A+  ARI+ + +G + PK G + +  Q       +H  
Sbjct: 61  NYRLPEDATLYVTLEPCTMCVGALVHARIKHVVFGTTEPKAGSLVSARQLLENGYYNHKF 120

Query: 127 EIYPGISEQRSRQIIQDFF 145
               G   ++  Q +  FF
Sbjct: 121 TFEHGCLHEKCAQQLSLFF 139


>gi|313902768|ref|ZP_07836165.1| tRNA-adenosine deaminase [Thermaerobacter subterraneus DSM 13965]
 gi|313466888|gb|EFR62405.1| tRNA-adenosine deaminase [Thermaerobacter subterraneus DSM 13965]
          Length = 200

 Score = 99.8 bits (247), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 56/128 (43%), Positives = 70/128 (54%)

Query: 22  NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81
            E+PVGAVAV  + II+R  N    L D TAHAEIL +R     L    L  V LYVTLE
Sbjct: 46  GEVPVGAVAVYQDAIIARGHNLRERLGDPTAHAEILVLREAAARLGGWRLEGVTLYVTLE 105

Query: 82  PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141
           PC MCA AI LAR+ RL YGA +PK G   +          +H  E+  G+    S  ++
Sbjct: 106 PCPMCAGAIVLARVPRLVYGARDPKAGAAGSLMNLVQHDRLNHRVELRSGVLADASAALL 165

Query: 142 QDFFKERR 149
           + FF+  R
Sbjct: 166 RGFFRRLR 173


>gi|237748635|ref|ZP_04579115.1| tRNA-specific adenosine deaminase [Oxalobacter formigenes OXCC13]
 gi|229379997|gb|EEO30088.1| tRNA-specific adenosine deaminase [Oxalobacter formigenes OXCC13]
          Length = 171

 Score = 99.8 bits (247), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 56/144 (38%), Positives = 82/144 (56%)

Query: 6   VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           +FM  AL +A  A    E+PVGAV VL+ +II+R  N+     D TAHAEI+A+R   R 
Sbjct: 5   IFMREALAQAALAEEAGEVPVGAVVVLDGQIIARGFNQPITAHDPTAHAEIVALRNAARF 64

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
                LP+ +LYVTLEPC+MC  A+  AR++R+ +GA  P+ G   +    +     +H 
Sbjct: 65  CGNYRLPDCELYVTLEPCSMCVGAMIHARLKRVIFGAKEPRTGACGSIIDLFAQNELNHH 124

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
             +  G+ E  S  +++ FF  RR
Sbjct: 125 TTVTGGVLENESSVLLKTFFAGRR 148


>gi|26248923|ref|NP_754963.1| tRNA-specific adenosine deaminase [Escherichia coli CFT073]
 gi|227887593|ref|ZP_04005398.1| tRNA-specific adenosine deaminase [Escherichia coli 83972]
 gi|300982262|ref|ZP_07175973.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Escherichia coli MS 45-1]
 gi|301047197|ref|ZP_07194289.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Escherichia coli MS 185-1]
 gi|312965474|ref|ZP_07779706.1| tRNA-specific adenosine deaminase [Escherichia coli 2362-75]
 gi|26109329|gb|AAN81531.1|AE016764_213 Hypothetical protein yfhC [Escherichia coli CFT073]
 gi|227835943|gb|EEJ46409.1| tRNA-specific adenosine deaminase [Escherichia coli 83972]
 gi|300300874|gb|EFJ57259.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Escherichia coli MS 185-1]
 gi|300408816|gb|EFJ92354.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Escherichia coli MS 45-1]
 gi|307554578|gb|ADN47353.1| tRNA-specific adenosine deaminase [Escherichia coli ABU 83972]
 gi|312289894|gb|EFR17782.1| tRNA-specific adenosine deaminase [Escherichia coli 2362-75]
 gi|315292466|gb|EFU51818.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Escherichia coli MS 153-1]
 gi|324008467|gb|EGB77686.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Escherichia coli MS 57-2]
          Length = 178

 Score = 99.8 bits (247), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 56/143 (39%), Positives = 77/143 (53%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  A+  A+ A    E+PVGAV V NN++I    NR     D TAHAEI+A+R G  ++
Sbjct: 22  WMRHAMTLAKRAWDEREVPVGAVLVHNNRVIGEGWNRPIGRHDPTAHAEIMALRQGGLVM 81

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  LYVTLEPC MCA A+  +RI R+ +GA + K G   +          +H  
Sbjct: 82  QNYRLIDATLYVTLEPCVMCAGAMIHSRIGRVVFGARDAKTGAAGSLMDVLHHPGMNHRV 141

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           EI  GI       ++ DFF+ RR
Sbjct: 142 EITEGILADECAALLSDFFRMRR 164


>gi|295687633|ref|YP_003591326.1| CMP/dCMP deaminase zinc-binding protein [Caulobacter segnis ATCC
           21756]
 gi|295429536|gb|ADG08708.1| CMP/dCMP deaminase zinc-binding protein [Caulobacter segnis ATCC
           21756]
          Length = 148

 Score = 99.8 bits (247), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 58/131 (44%), Positives = 81/131 (61%), Gaps = 4/131 (3%)

Query: 22  NEIPVGAVAVLNNK---IISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYV 78
            E PVGAV +L+ K   +++ AGN      D TAHAEI A+R     L    L ++ L V
Sbjct: 15  GETPVGAV-ILDPKTGEVLAVAGNGPIAAHDPTAHAEIAAMRAAAAKLENYRLTDLTLVV 73

Query: 79  TLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSR 138
           TLEPC MCA AIS ARI R+ +GA +PKGG + +G +F+   TCH  PE+  G+  + S 
Sbjct: 74  TLEPCAMCAGAISHARIGRVVFGAEDPKGGAVVHGPKFFAQPTCHWRPEVTGGVLAEESA 133

Query: 139 QIIQDFFKERR 149
           ++++ FF+ RR
Sbjct: 134 ELLRGFFRARR 144


>gi|218247490|ref|YP_002372861.1| CMP/dCMP deaminase [Cyanothece sp. PCC 8801]
 gi|257061174|ref|YP_003139062.1| CMP/dCMP deaminase zinc-binding [Cyanothece sp. PCC 8802]
 gi|218167968|gb|ACK66705.1| CMP/dCMP deaminase zinc-binding [Cyanothece sp. PCC 8801]
 gi|256591340|gb|ACV02227.1| CMP/dCMP deaminase zinc-binding [Cyanothece sp. PCC 8802]
          Length = 154

 Score = 99.8 bits (247), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 57/144 (39%), Positives = 78/144 (54%), Gaps = 1/144 (0%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNN-KIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           +M  AL +A+ A    E+PVGA+ V +   +++  GNR    +D TAHAE+LAIR   + 
Sbjct: 10  WMEKALNQAKLAGEIGEVPVGAIIVDHQGNLLAETGNRKETNQDPTAHAEMLAIRQASQR 69

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           L    L    LYVTLEPC MC  A+  +R+  L YG   PK G I         A  +H 
Sbjct: 70  LQTWHLNNCTLYVTLEPCPMCTGALIQSRLGLLVYGCDEPKSGTIRTVMNLPDSACSNHR 129

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
             +  GI E+  RQ +Q +F+ERR
Sbjct: 130 LAVISGILEEECRQQLQQWFRERR 153


>gi|325207969|gb|ADZ03421.1| putative tRNA-specific adenosine deaminase [Neisseria meningitidis
           NZ-05/33]
          Length = 148

 Score = 99.8 bits (247), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 57/143 (39%), Positives = 81/143 (56%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  ALE+A+ +AL  EIPVGAV V + KII+ A N      +V+ HAEI A+      +
Sbjct: 4   FMGLALEQAKLSALMGEIPVGAVIVSDGKIIASAHNTCIADCNVSRHAEINALAQAGSEM 63

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L   D+Y+TLEPC MCA+A+  ARIRR+ YGA+ PK G   +    +     +   
Sbjct: 64  QNYRLDGCDIYITLEPCAMCASALIQARIRRVIYGAAEPKTGAAGSIVNLFADKRLNTHT 123

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
            I  GI ++  R ++  FF+ +R
Sbjct: 124 AIRGGILQEECRAVLSRFFQNKR 146


>gi|269962366|ref|ZP_06176716.1| zinc-binding domain protein [Vibrio harveyi 1DA3]
 gi|269832862|gb|EEZ86971.1| zinc-binding domain protein [Vibrio harveyi 1DA3]
          Length = 164

 Score = 99.8 bits (247), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 54/142 (38%), Positives = 75/142 (52%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  A+E A+ A    E+PVGAV V + +I++   NR+    D TAHAEI  +R     L 
Sbjct: 1   MRRAMELAEQAEAEGEVPVGAVLVKDGEIVAEGWNRSICAHDATAHAEIQTLRKAGEALE 60

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
              L +  LYVTLEPC MCA A+  +R++R+ YGA + K G        +     +H   
Sbjct: 61  NYRLLDTTLYVTLEPCPMCAGALLHSRVKRVVYGAPDLKAGAAGTVLNLFKSQAAYHYAT 120

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
           +  G+ E   R  +Q FFK RR
Sbjct: 121 VESGLLEDECRSQLQAFFKRRR 142


>gi|16124486|ref|NP_419050.1| cytidine and deoxycytidylate deaminase family protein [Caulobacter
           crescentus CB15]
 gi|13421360|gb|AAK22218.1| cytidine and deoxycytidylate deaminase family protein [Caulobacter
           crescentus CB15]
          Length = 161

 Score = 99.8 bits (247), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 57/130 (43%), Positives = 77/130 (59%), Gaps = 2/130 (1%)

Query: 22  NEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVT 79
            E PVGAV +     ++I+ AGN      D TAHAEI A+R     L    L ++ L VT
Sbjct: 28  GETPVGAVILDPSTGEVIATAGNGPIAAHDPTAHAEIAAMRAAAAKLGNYRLTDLTLVVT 87

Query: 80  LEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139
           LEPC MCA AIS ARI R+ +GA +PKGG + +G +F+   TCH  PE+  G+    S  
Sbjct: 88  LEPCAMCAGAISHARIGRVVFGADDPKGGAVVHGPKFFAQPTCHWRPEVTGGVLADESAD 147

Query: 140 IIQDFFKERR 149
           +++ FF+ RR
Sbjct: 148 LLRGFFRARR 157


>gi|260589044|ref|ZP_05854957.1| tRNA-specific adenosine deaminase [Blautia hansenii DSM 20583]
 gi|331083249|ref|ZP_08332362.1| hypothetical protein HMPREF0992_01286 [Lachnospiraceae bacterium
           6_1_63FAA]
 gi|260540823|gb|EEX21392.1| tRNA-specific adenosine deaminase [Blautia hansenii DSM 20583]
 gi|330404330|gb|EGG83875.1| hypothetical protein HMPREF0992_01286 [Lachnospiraceae bacterium
           6_1_63FAA]
          Length = 164

 Score = 99.8 bits (247), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 57/149 (38%), Positives = 77/149 (51%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M +   FM  A ++A  A    E+P+G V V   KII+R  NR    K+  +HAEI AIR
Sbjct: 1   MTEDERFMREAKKQAMKAYALREVPIGCVIVYEGKIIARGYNRRNTDKNTVSHAEINAIR 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              + L    L    LYVTLEPC MCA AI  AR+ R+  G+ NPK G   +      + 
Sbjct: 61  KASKKLGDWRLEGCTLYVTLEPCQMCAGAIIQARVDRVVIGSMNPKAGCAGSVLNLLEMD 120

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  E+  G+ E+    ++  FFKE R
Sbjct: 121 GFNHKAEVTRGVLEEECSSMLSGFFKELR 149


>gi|322834117|ref|YP_004214144.1| CMP/dCMP deaminase zinc-binding protein [Rahnella sp. Y9602]
 gi|321169318|gb|ADW75017.1| CMP/dCMP deaminase zinc-binding protein [Rahnella sp. Y9602]
          Length = 180

 Score = 99.8 bits (247), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 57/149 (38%), Positives = 79/149 (53%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M     +M  A+  A  A    E+PVGAV VL+N++I    NR+    D TAHAEI+A+R
Sbjct: 9   MNDDEHWMRQAMNLALKAQDEGEVPVGAVLVLDNQVIGEGWNRSIGHHDPTAHAEIMALR 68

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
            G   +    L    LYVTLEPC MCA A+  +RIRR+ YGA++ K G   +        
Sbjct: 69  QGGNAVQNYRLLNATLYVTLEPCVMCAGAMIHSRIRRVVYGAADAKTGAAGSLLDVLRHP 128

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  EI  G+  +   + +  FF+ RR
Sbjct: 129 GMNHQVEITAGVLAEACSEQLSAFFRFRR 157


>gi|189347424|ref|YP_001943953.1| CMP/dCMP deaminase zinc-binding [Chlorobium limicola DSM 245]
 gi|189341571|gb|ACD90974.1| CMP/dCMP deaminase zinc-binding [Chlorobium limicola DSM 245]
          Length = 152

 Score = 99.8 bits (247), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 56/150 (37%), Positives = 78/150 (52%), Gaps = 1/150 (0%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNN-KIISRAGNRNRELKDVTAHAEILAI 59
           M   N +M  A  EA  A  + E+PVGAV   +N  I  R  N+   L D TAHAE++A+
Sbjct: 1   MHNLNFYMEQAFREALKAYEKKEVPVGAVVFDSNGNIAGRGHNQVEALSDATAHAEMIAL 60

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
                 L  + L    L VT+EPC MCA AI  A++ R+ +GA +PK G           
Sbjct: 61  TSAMATLGSKYLDACTLAVTMEPCPMCAGAIVNAKVGRVIFGAYDPKMGASGTVLNITGC 120

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
              +H PE+  GI E +  ++++DFF E R
Sbjct: 121 RELNHQPEVIGGIMENKCSELLRDFFSELR 150


>gi|251781204|ref|ZP_04824120.1| tRNA-specific adenosine deaminase [Clostridium botulinum E1 str.
           'BoNT E Beluga']
 gi|243081651|gb|EES47712.1| tRNA-specific adenosine deaminase [Clostridium botulinum E1 str.
           'BoNT E Beluga']
          Length = 152

 Score = 99.8 bits (247), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 50/103 (48%), Positives = 65/103 (63%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           F+  A EEA+ A  + E+P+GAV V +N +IS+A N    LKD TAHAEILAIR   + L
Sbjct: 3   FLDIAKEEAKKAMSKGEVPIGAVIVKDNIVISKAHNLKETLKDATAHAEILAIREASKFL 62

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109
               L   ++YVTLEPCTMC +AI  +RI +L+ G  N   G 
Sbjct: 63  EDWRLNGTEMYVTLEPCTMCTSAIIQSRISKLHIGTFNKDMGA 105


>gi|330445259|ref|ZP_08308911.1| tRNA-specific adenosine deaminase monomer [Photobacterium
           leiognathi subsp. mandapamensis svers.1.1.]
 gi|328489450|dbj|GAA03408.1| tRNA-specific adenosine deaminase monomer [Photobacterium
           leiognathi subsp. mandapamensis svers.1.1.]
          Length = 163

 Score = 99.8 bits (247), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 53/142 (37%), Positives = 76/142 (53%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  A+E A  A    E+PVGAV V N ++I    NR+    D TAHAEI+A+R   ++L 
Sbjct: 1   MRRAMELAAKAEGEGEVPVGAVVVHNGQVIGEGWNRSIGQHDATAHAEIMALRQAGKVLE 60

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
              L +  +YVTLEPC MCA A+  +R+ ++ YGA + K G   +     +    +H   
Sbjct: 61  NYRLLDTTVYVTLEPCPMCAGAMVHSRVGKVVYGADDLKTGAAGSTMNLLSYDGVNHHVG 120

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
           +  G+     R  +Q FFK RR
Sbjct: 121 LVSGVLADECRAQLQAFFKRRR 142


>gi|300770195|ref|ZP_07080074.1| tRNA-specific adenosine deaminase [Sphingobacterium spiritivorum
           ATCC 33861]
 gi|300762671|gb|EFK59488.1| tRNA-specific adenosine deaminase [Sphingobacterium spiritivorum
           ATCC 33861]
          Length = 154

 Score = 99.8 bits (247), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 53/143 (37%), Positives = 75/143 (52%), Gaps = 6/143 (4%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  AL  A+ A   +E+P+GAV V   KII +  N    L DVTAHAE+ A       L
Sbjct: 18  YMKAALTLAKKAYEEDEVPIGAVIVSQGKIIGKGYNLTERLNDVTAHAEMQAFTAASSYL 77

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
             + L +  LYVT+EPC MCA A    ++ R+ YGA + K G    G  F      H   
Sbjct: 78  GGKYLKDCTLYVTVEPCVMCAGASYWTQVSRIVYGAPDEKRGASRYGKLF------HPKT 131

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           EI  G+ ++   ++I  FF+++R
Sbjct: 132 EIISGVLQEECAELITSFFRQKR 154


>gi|88608086|ref|YP_505986.1| cytidine/deoxycytidylate deaminase family protein [Neorickettsia
           sennetsu str. Miyayama]
 gi|88600255|gb|ABD45723.1| cytidine/deoxycytidylate deaminase family protein [Neorickettsia
           sennetsu str. Miyayama]
          Length = 144

 Score = 99.8 bits (247), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 56/143 (39%), Positives = 80/143 (55%), Gaps = 4/143 (2%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  A+  A+ +    E+PVGAV V    +I+ +GNR     D TAHAE+  IR   + L
Sbjct: 5   FMELAMSVARQSDC--EVPVGAVLVRQGAVIASSGNRVFRDSDPTAHAEMFVIREAIQRL 62

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
             + L + +LYVTLEPC MC  A+SL+R+  L + A + K G I NG       T  H P
Sbjct: 63  GVKFLVDFELYVTLEPCPMCMYAMSLSRVGTLCFAAYDEKRGAISNGC--LGTGTYFHVP 120

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
            IY G+ E  +++++  FF+  R
Sbjct: 121 IIYEGLMEDEAKELLSSFFRILR 143


>gi|289547972|ref|YP_003472960.1| CMP/dCMP deaminase zinc-binding protein [Thermocrinis albus DSM
           14484]
 gi|289181589|gb|ADC88833.1| CMP/dCMP deaminase zinc-binding protein [Thermocrinis albus DSM
           14484]
          Length = 156

 Score = 99.4 bits (246), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 57/143 (39%), Positives = 80/143 (55%), Gaps = 1/143 (0%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           F+   L EA  A  + EIPVG V V   +II+RA NR   LKD TAHAEILAIR   + L
Sbjct: 8   FVKACLLEAHRAFRKGEIPVGCVVVKEGRIIARAHNRTIALKDPTAHAEILAIRKALKKL 67

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
            +  L    LYVTLEPC MCA A+ LAR+ ++ + A + K G + +          +H  
Sbjct: 68  GESFLYGCTLYVTLEPCAMCAYALVLARVDKVIFLAQDEKLGAVMSLYNLLDETAFNHRV 127

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
             +  +  + + ++++DFFK  R
Sbjct: 128 R-WEFLPVEEAGRLLRDFFKNLR 149


>gi|241760058|ref|ZP_04758156.1| cytidine and deoxycytidylate deaminase family protein [Neisseria
           flavescens SK114]
 gi|241319512|gb|EER55942.1| cytidine and deoxycytidylate deaminase family protein [Neisseria
           flavescens SK114]
          Length = 240

 Score = 99.4 bits (246), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 53/143 (37%), Positives = 81/143 (56%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  A+E+A+ +A   E+PVGAV V   + I+ A N      +V+ HAEI A+    + L
Sbjct: 95  FMRLAIEQARQSAALGEVPVGAVIVYQGEAIAAAHNTCIGDHNVSHHAEINALATAGKAL 154

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L + D+Y+TLEPC+MCA+A+  AR+ R+ YGA+ PK GG  +    +     +   
Sbjct: 155 QNYRLEDCDVYITLEPCSMCASALIQARVGRVIYGAAEPKTGGAGSVVDLFADKRLNKHT 214

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
            I  GI  +  + ++QDFF  +R
Sbjct: 215 AILGGILAEECQSVLQDFFAAKR 237


>gi|164686927|ref|ZP_02210955.1| hypothetical protein CLOBAR_00529 [Clostridium bartlettii DSM
           16795]
 gi|164604030|gb|EDQ97495.1| hypothetical protein CLOBAR_00529 [Clostridium bartlettii DSM
           16795]
          Length = 150

 Score = 99.4 bits (246), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 56/143 (39%), Positives = 77/143 (53%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM+ A+ EA+ A  + E P+GAV V +++II R  N    L+D TAHAE+LAI+     L
Sbjct: 6   FMNEAINEAKKAYDKGETPIGAVIVKDSEIIGRGHNLTETLRDSTAHAEMLAIKDASETL 65

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L + DLYVT+EPC MC+ AI  +RI+ +  G  + K   IE    F          
Sbjct: 66  GGWRLTDCDLYVTMEPCIMCSGAIVNSRIKNIIIGTKHIKNANIEKQHTFKMEYFKDSRV 125

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
            +  GI E     I+Q FFK+ R
Sbjct: 126 NVEFGIMEDECSIILQRFFKDLR 148


>gi|90021123|ref|YP_526950.1| tRNA-adenosine deaminase [Saccharophagus degradans 2-40]
 gi|89950723|gb|ABD80738.1| tRNA-adenosine deaminase [Saccharophagus degradans 2-40]
          Length = 176

 Score = 99.4 bits (246), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 54/128 (42%), Positives = 72/128 (56%)

Query: 22  NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81
           +E+PVGAV V +NKI+    N      D TAHAEI A+R   +      LP+  LYVT+E
Sbjct: 26  HEVPVGAVVVRDNKILGSGFNTPISGCDPTAHAEITALRQAAKNEHNYRLPDATLYVTIE 85

Query: 82  PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141
           PCTMC  AI  AR+ R+ YGA+ PK G I +   +      +H  E   G+    +  +I
Sbjct: 86  PCTMCLGAIMHARVARVVYGATEPKAGVIYSNPVWQQGGFFNHQVEWCGGVLANEATALI 145

Query: 142 QDFFKERR 149
           Q FFK+RR
Sbjct: 146 QQFFKQRR 153


>gi|307825441|ref|ZP_07655660.1| CMP/dCMP deaminase zinc-binding [Methylobacter tundripaludum SV96]
 gi|307733616|gb|EFO04474.1| CMP/dCMP deaminase zinc-binding [Methylobacter tundripaludum SV96]
          Length = 142

 Score = 99.4 bits (246), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 55/142 (38%), Positives = 78/142 (54%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  A+  AQ A  + E+PVGA+ V +N+ I+   N      D TAHAE++A+R     + 
Sbjct: 1   MRHAIRLAQRAEQQGEVPVGAIVVRDNRCIAEGWNIPITSHDPTAHAEVVAMRGAGVHVQ 60

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
              L +  LYVTLEPC MC  A+S ARI+RL +GA +PK G + N          +H   
Sbjct: 61  NYRLNDATLYVTLEPCVMCIGAMSHARIKRLVFGAYDPKRGAVCNALSLTDAPFLNHRIS 120

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
              G+ E    ++++DFFK RR
Sbjct: 121 WDGGVLETECSEMLRDFFKARR 142


>gi|225867781|ref|YP_002743729.1| deaminase [Streptococcus equi subsp. zooepidemicus]
 gi|225701057|emb|CAW97859.1| putative deaminase [Streptococcus equi subsp. zooepidemicus]
          Length = 164

 Score = 99.4 bits (246), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 56/143 (39%), Positives = 78/143 (54%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  AL+EA+ + L++EIP+G V V    II R  N   E      HAEI+AI       
Sbjct: 11  FMREALKEAEKSLLKDEIPIGCVIVKAGHIIGRGHNAREERNQAIMHAEIMAINEANAHE 70

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  L+VT+EPC MC+ AI LARI  + YGASN K GG  +  Q  T    +H  
Sbjct: 71  GNWRLLDTTLFVTIEPCVMCSGAIGLARIPHVVYGASNQKFGGAGSLYQILTDKRLNHRV 130

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           ++  G+      +++Q FF++RR
Sbjct: 131 QLEVGLLADDCAKLMQTFFRQRR 153


>gi|329770051|ref|ZP_08261446.1| hypothetical protein HMPREF0433_01210 [Gemella sanguinis M325]
 gi|328837362|gb|EGF86992.1| hypothetical protein HMPREF0433_01210 [Gemella sanguinis M325]
          Length = 155

 Score = 99.4 bits (246), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 50/149 (33%), Positives = 82/149 (55%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           MK+ + +M  ALEEA++A  + E+P+GAV V++ ++++   N   E +    HAE++AI+
Sbjct: 1   MKEHSYYMELALEEARSAYEKGEVPIGAVLVVDGQVVACGHNTREETQQALNHAEMIAIK 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
             C       L    LY T+EPC MC+ AI  AR+  + YGA +PK G   +     +  
Sbjct: 61  KACEKQGFWRLDNSYLYTTIEPCVMCSGAIVQARVENVIYGAKDPKYGCCGSCMDLVSDN 120

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H   +  G+ E     ++++FFKE R
Sbjct: 121 KFNHQANVISGVLEDECSSLMRNFFKELR 149


>gi|332754174|gb|EGJ84543.1| tRNA-specific adenosine deaminase [Shigella flexneri K-671]
          Length = 156

 Score = 99.4 bits (246), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 57/142 (40%), Positives = 76/142 (53%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  AL  A+ A    E+PVGAV V NN++I    NR     D TAHAEI+A+R G  ++ 
Sbjct: 1   MRHALTLAKRAWDEREVPVGAVLVHNNRVIGEGWNRPIGRHDPTAHAEIMALRQGGLVMQ 60

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
              L +  LYVTLEPC MCA A+  +RI R+ +GA + K G   +          +H  E
Sbjct: 61  NYRLIDATLYVTLEPCVMCAGAMIHSRIGRVVFGARDAKTGAAGSLMDVLHHPGMNHRVE 120

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
           I  GI       ++ DFF+ RR
Sbjct: 121 ITEGILADECAALLSDFFRMRR 142


>gi|71736711|ref|YP_273597.1| cytidine/deoxycytidylate deaminase family protein [Pseudomonas
           syringae pv. phaseolicola 1448A]
 gi|289625949|ref|ZP_06458903.1| cytidine/deoxycytidylate deaminase family protein [Pseudomonas
           syringae pv. aesculi str. NCPPB3681]
 gi|289647891|ref|ZP_06479234.1| cytidine/deoxycytidylate deaminase family protein [Pseudomonas
           syringae pv. aesculi str. 2250]
 gi|71557264|gb|AAZ36475.1| cytidine/deoxycytidylate deaminase family protein [Pseudomonas
           syringae pv. phaseolicola 1448A]
 gi|320323193|gb|EFW79282.1| cytidine/deoxycytidylate deaminase family protein [Pseudomonas
           syringae pv. glycinea str. B076]
 gi|320329536|gb|EFW85525.1| cytidine/deoxycytidylate deaminase family protein [Pseudomonas
           syringae pv. glycinea str. race 4]
 gi|330867510|gb|EGH02219.1| cytidine/deoxycytidylate deaminase family protein [Pseudomonas
           syringae pv. aesculi str. 0893_23]
 gi|330874802|gb|EGH08951.1| cytidine/deoxycytidylate deaminase family protein [Pseudomonas
           syringae pv. glycinea str. race 4]
          Length = 169

 Score = 99.4 bits (246), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 52/127 (40%), Positives = 73/127 (57%)

Query: 23  EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEP 82
           E+PVGAV V N +II R  N      D +AHAE++AIR   R L    LP   LYVTLEP
Sbjct: 31  EVPVGAVVVQNGEIIGRGYNCPISASDPSAHAEMVAIRDAARALDNYRLPGSTLYVTLEP 90

Query: 83  CTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQ 142
           C+MCA  I  +R+ R+ YGA  PK G +++  QF++    +H      G+  +    ++ 
Sbjct: 91  CSMCAGLIVHSRVARVVYGALEPKAGIVQSQGQFFSQGFLNHRVLFEGGVLSEECGAMLS 150

Query: 143 DFFKERR 149
           +FF+ RR
Sbjct: 151 EFFRMRR 157


>gi|266621805|ref|ZP_06114740.1| tRNA-specific adenosine deaminase [Clostridium hathewayi DSM 13479]
 gi|288866494|gb|EFC98792.1| tRNA-specific adenosine deaminase [Clostridium hathewayi DSM 13479]
          Length = 165

 Score = 99.4 bits (246), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 54/149 (36%), Positives = 81/149 (54%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M     +M  A+ +A+ A    E+P+G V V  +KII+R  NR    K+V +HAEI+AI+
Sbjct: 1   MNADEKYMRAAIGQARKAGAIGEVPIGCVIVYEDKIIARGYNRRTIDKNVLSHAEIIAIK 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
             C+ +    L    +YVTLEPC MCA AI  ARI ++  G  NPK G   +        
Sbjct: 61  KACKKIGDWRLEGCTMYVTLEPCPMCAGAIVQARIPKVVIGCMNPKAGCAGSVLDLLHED 120

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  E+  G+ E+   +++++FFK  R
Sbjct: 121 GFNHQVEMEKGVLEEECSRLMKEFFKALR 149


>gi|193077204|gb|ABO11996.2| putative deaminase [Acinetobacter baumannii ATCC 17978]
          Length = 158

 Score = 99.4 bits (246), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 59/139 (42%), Positives = 74/139 (53%), Gaps = 1/139 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  A E+A+ AA + EIPVGAV V  NK+I    N    L D TAHAEI AIR  C  L 
Sbjct: 1   MQLAYEQAELAAEQGEIPVGAVIVSQNKLIGAGFNAPIGLSDPTAHAEIQAIRAACESLK 60

Query: 68  QEILPE-VDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
              LPE   LYVTLEPCTMC  A+  ARI+ + +G + PK G + +  Q       +H  
Sbjct: 61  NYRLPEDATLYVTLEPCTMCVGALVHARIKHVVFGTTEPKAGSLVSARQLLENGYYNHKF 120

Query: 127 EIYPGISEQRSRQIIQDFF 145
               G   ++  Q +  FF
Sbjct: 121 TFEHGCLHEKCAQQLSLFF 139


>gi|302185724|ref|ZP_07262397.1| cytidine/deoxycytidylate deaminase, zinc-binding region
           [Pseudomonas syringae pv. syringae 642]
          Length = 169

 Score = 99.4 bits (246), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 52/127 (40%), Positives = 74/127 (58%)

Query: 23  EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEP 82
           E+PVGAV V N +II R  N      D +AHAE++AIR   + L    LP   LYVTLEP
Sbjct: 31  EVPVGAVVVQNGEIIGRGYNCPISGSDPSAHAEMVAIRQAAKALDNYRLPGSTLYVTLEP 90

Query: 83  CTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQ 142
           C+MCA  I  +R+ R+ YGA  PK G +++  QF++ A  +H      G+  +    ++ 
Sbjct: 91  CSMCAGLIVHSRVARVVYGALEPKAGIVQSQGQFFSQAFLNHRVLFEGGVLGEECGTMLS 150

Query: 143 DFFKERR 149
           +FF+ RR
Sbjct: 151 EFFRMRR 157


>gi|292489080|ref|YP_003531967.1| tRNA-specific adenosine deaminase [Erwinia amylovora CFBP1430]
 gi|291554514|emb|CBA22074.1| tRNA-specific adenosine deaminase [Erwinia amylovora CFBP1430]
          Length = 159

 Score = 99.4 bits (246), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 55/143 (38%), Positives = 78/143 (54%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  AL  A+ A    E+PVGAV VL+N++I    NR     D TAHAE++A+R G +++
Sbjct: 9   WMRHALRLARRAWDEGEVPVGAVLVLDNQVIGEGWNRPIGHHDPTAHAEMMALRQGGKMI 68

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  LYVTLEPC MCA A+  +RI RL YGA + K G   +          +H  
Sbjct: 69  ENYRLLDTTLYVTLEPCVMCAGAMIHSRIGRLVYGARDAKTGAAGSLLDVLGHPGMNHQV 128

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
               G+       ++ DFF++RR
Sbjct: 129 PAECGLLNDECAAMLSDFFRQRR 151


>gi|292900205|ref|YP_003539574.1| tRNA-specific adenosine deaminase [Erwinia amylovora ATCC 49946]
 gi|291200053|emb|CBJ47178.1| tRNA-specific adenosine deaminase [Erwinia amylovora ATCC 49946]
          Length = 164

 Score = 99.4 bits (246), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 55/143 (38%), Positives = 78/143 (54%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  AL  A+ A    E+PVGAV VL+N++I    NR     D TAHAE++A+R G +++
Sbjct: 14  WMRHALRLARRAWDEGEVPVGAVLVLDNQVIGEGWNRPIGHHDPTAHAEMMALRQGGKMI 73

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  LYVTLEPC MCA A+  +RI RL YGA + K G   +          +H  
Sbjct: 74  ENYRLLDTTLYVTLEPCVMCAGAMIHSRIGRLVYGARDAKTGAAGSLLDVLGHPGMNHQV 133

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
               G+       ++ DFF++RR
Sbjct: 134 PAECGLLNDECAAMLSDFFRQRR 156


>gi|116750214|ref|YP_846901.1| zinc-binding CMP/dCMP deaminase [Syntrophobacter fumaroxidans MPOB]
 gi|116699278|gb|ABK18466.1| tRNA-adenosine deaminase [Syntrophobacter fumaroxidans MPOB]
          Length = 158

 Score = 99.4 bits (246), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 57/146 (39%), Positives = 78/146 (53%), Gaps = 1/146 (0%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAV-AVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
           + FM  ALEEA      +E+PVGAV A    ++++R  NR   L D TAHAEIL +R   
Sbjct: 8   DYFMGIALEEALAGREESEVPVGAVLAGPGGEVLARGHNRPIALCDPTAHAEILVLREAA 67

Query: 64  RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123
                  LP   LYVTLEPC MC  A+  AR+R L +GA +PK G   +      +   +
Sbjct: 68  AAAGNYRLPGSVLYVTLEPCAMCVGALLQARVRTLVFGAPDPKSGAAGSVVDLTKVDAFN 127

Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149
           H  E+  GI      ++++ FF +RR
Sbjct: 128 HYVEVIGGIRMAECSELLKKFFLDRR 153


>gi|297539076|ref|YP_003674845.1| CMP/dCMP deaminase zinc-binding protein [Methylotenera sp. 301]
 gi|297258423|gb|ADI30268.1| CMP/dCMP deaminase zinc-binding protein [Methylotenera sp. 301]
          Length = 162

 Score = 99.4 bits (246), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 52/127 (40%), Positives = 70/127 (55%)

Query: 23  EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEP 82
           E+PVGA+ V +  +I R GN   +  D TAHAEI A+R   + L    L    LYVTLEP
Sbjct: 33  EVPVGAIIVKDGVVIGRGGNSPIDTHDPTAHAEIAALRDAAKNLGNYRLVGCSLYVTLEP 92

Query: 83  CTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQ 142
           C MC  AI  ARI RL YGA++PK G   +          +H  E++ G   +    ++ 
Sbjct: 93  CAMCTGAIQHARIARLVYGANDPKTGACGSVVNLMAEPKLNHHTEVFSGELAKECGAMLS 152

Query: 143 DFFKERR 149
           +FFK+RR
Sbjct: 153 EFFKQRR 159


>gi|312173235|emb|CBX81490.1| tRNA-specific adenosine deaminase [Erwinia amylovora ATCC BAA-2158]
          Length = 166

 Score = 99.4 bits (246), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 55/143 (38%), Positives = 78/143 (54%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  AL  A+ A    E+PVGAV VL+N++I    NR     D TAHAE++A+R G +++
Sbjct: 9   WMRHALRLARRAWDEGEVPVGAVLVLDNQVIGEGWNRPIGHHDPTAHAEMMALRQGGKMI 68

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  LYVTLEPC MCA A+  +RI RL YGA + K G   +          +H  
Sbjct: 69  ENYRLLDTTLYVTLEPCVMCAGAMIHSRIGRLVYGARDAKTGAAGSLLDVLGHPGMNHQV 128

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
               G+       ++ DFF++RR
Sbjct: 129 PAECGLLNDECAAMLSDFFRQRR 151


>gi|254796483|ref|YP_003081319.1| tRNA-specific adenosine deaminase [Neorickettsia risticii str.
           Illinois]
 gi|254589716|gb|ACT69078.1| tRNA-specific adenosine deaminase [Neorickettsia risticii str.
           Illinois]
          Length = 139

 Score = 99.4 bits (246), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 52/127 (40%), Positives = 74/127 (58%), Gaps = 2/127 (1%)

Query: 23  EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEP 82
           E+PVGAV V    +I+ +GNR     D TAHAE+L IR   + L  + L + +LYVTLEP
Sbjct: 14  EVPVGAVLVRQGAVIASSGNRVFRDSDPTAHAEMLVIREAIQRLGVKFLVDFELYVTLEP 73

Query: 83  CTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQ 142
           C MC  A+SL+R+  L + A + K G I NG       T  H P +Y G+ E  +++++ 
Sbjct: 74  CPMCMYAMSLSRVGTLCFAAYDEKRGAISNGC--LGTGTYFHVPMVYEGLMEDEAKELLS 131

Query: 143 DFFKERR 149
            FF+  R
Sbjct: 132 SFFRILR 138


>gi|119468555|ref|ZP_01611646.1| tRNA-specific adenosine deaminase [Alteromonadales bacterium TW-7]
 gi|119448063|gb|EAW29328.1| tRNA-specific adenosine deaminase [Alteromonadales bacterium TW-7]
          Length = 165

 Score = 99.4 bits (246), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 55/143 (38%), Positives = 81/143 (56%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  AL  A+ A   NEIPVGAV V +N++I+   NR+    D +AHAE++A+R   + L
Sbjct: 10  WMEQALLYAKQAEQLNEIPVGAVLVKDNQLIASGYNRSITDNDPSAHAEMIAVREAGKAL 69

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
           +   L +  LYVTLEPC+MCA  +  +RI+RL +GA + K G   +          +H  
Sbjct: 70  NNYRLIDCTLYVTLEPCSMCAGLLVHSRIKRLVFGAPDAKTGSAGSIMNLLQEPRLNHQV 129

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+  G+   +    I +FFK RR
Sbjct: 130 EVVGGVLADKCGNTISEFFKRRR 152


>gi|299770395|ref|YP_003732421.1| putative deaminase [Acinetobacter sp. DR1]
 gi|298700483|gb|ADI91048.1| putative deaminase [Acinetobacter sp. DR1]
          Length = 158

 Score = 99.4 bits (246), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 56/139 (40%), Positives = 76/139 (54%), Gaps = 1/139 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  A E+A+ AA + EIPVGA+ V  N++I    N    L D TAHAEI AIR  C  L+
Sbjct: 1   MQLAYEQAELAAQQGEIPVGAIVVSQNRVIGSGYNAPISLLDPTAHAEIQAIRAACLSLN 60

Query: 68  QEILPE-VDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
              LP+   LYVTLEPCTMC  A+  ARI+ + +G + PK G + +  Q       +H  
Sbjct: 61  NYRLPDDATLYVTLEPCTMCVGALVHARIKHVVFGTTEPKAGSLVSARQLLQDGYYNHRF 120

Query: 127 EIYPGISEQRSRQIIQDFF 145
               G  +++  Q +  FF
Sbjct: 121 TFQQGCLQEKCAQQLSHFF 139


>gi|194735718|ref|YP_002115631.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. CVM19633]
 gi|197301052|ref|ZP_02663371.2| tRNA-specific adenosine deaminase [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. SL480]
 gi|204929496|ref|ZP_03220570.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp.
           enterica serovar Javiana str. GA_MM04042433]
 gi|194711220|gb|ACF90441.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. CVM19633]
 gi|197288879|gb|EDY28252.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. SL480]
 gi|204321215|gb|EDZ06415.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp.
           enterica serovar Javiana str. GA_MM04042433]
          Length = 172

 Score = 99.4 bits (246), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 55/143 (38%), Positives = 77/143 (53%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  AL  A+ A    E+PVGAV V N+++I    NR     D TAHAEI+A+R G  +L
Sbjct: 11  WMRHALTLAKRAWDEREVPVGAVLVHNHRVIGEGWNRPIGRHDPTAHAEIMALRQGGLVL 70

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  LYVTLEPC MCA A+  +RI R+ +GA + K G   +          +H  
Sbjct: 71  QNYRLLDTTLYVTLEPCVMCAGAMVHSRIGRVVFGARDAKTGAAGSLIDVLHHPGMNHRV 130

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           +I  G+       ++ DFF+ RR
Sbjct: 131 DIIEGVLRDECATLLSDFFRMRR 153


>gi|322378196|ref|ZP_08052680.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus
           sp. M334]
 gi|321280826|gb|EFX57842.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus
           sp. M334]
          Length = 155

 Score = 99.4 bits (246), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 61/151 (40%), Positives = 83/151 (54%), Gaps = 4/151 (2%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +++  VFM  AL EA+ A   +EIP+G V V +  II R  N   EL+    HAEI+AI 
Sbjct: 5   VEEKEVFMREALREAEIALEHDEIPIGCVIVKDGAIIGRGHNAREELQRAVMHAEIMAIE 64

Query: 61  MGCRILSQEILPEVD--LYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
                LS+E    +D  L+VT+EPC MC+ AI LARI  + YGA N K G   +     T
Sbjct: 65  NAN--LSEESWRLLDCTLFVTIEPCVMCSGAIGLARIPNVVYGAKNQKFGAAGSLYDILT 122

Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
               +H  ++  GI E     I+Q+FF+ RR
Sbjct: 123 DERLNHRVDVETGILEDECAAIMQNFFRNRR 153


>gi|194469725|ref|ZP_03075709.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp.
           enterica serovar Kentucky str. CVM29188]
 gi|197248207|ref|YP_002147526.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp.
           enterica serovar Agona str. SL483]
 gi|200387835|ref|ZP_03214447.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp.
           enterica serovar Virchow str. SL491]
 gi|205358526|ref|ZP_02657204.2| tRNA-specific adenosine deaminase [Salmonella enterica subsp.
           enterica serovar Kentucky str. CDC 191]
 gi|205359943|ref|ZP_02833442.2| tRNA-specific adenosine deaminase [Salmonella enterica subsp.
           enterica serovar Weltevreden str. HI_N05-537]
 gi|194456089|gb|EDX44928.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp.
           enterica serovar Kentucky str. CVM29188]
 gi|197211910|gb|ACH49307.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp.
           enterica serovar Agona str. SL483]
 gi|199604933|gb|EDZ03478.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp.
           enterica serovar Virchow str. SL491]
 gi|205333662|gb|EDZ20426.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp.
           enterica serovar Kentucky str. CDC 191]
 gi|205341963|gb|EDZ28727.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp.
           enterica serovar Weltevreden str. HI_N05-537]
          Length = 172

 Score = 99.4 bits (246), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 55/143 (38%), Positives = 77/143 (53%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  AL  A+ A    E+PVGAV V N+++I    NR     D TAHAEI+A+R G  +L
Sbjct: 11  WMRHALTLAKRAWDEREVPVGAVLVHNHRVIGEGWNRPIGRHDPTAHAEIMALRQGGLVL 70

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  LYVTLEPC MCA A+  +RI R+ +GA + K G   +          +H  
Sbjct: 71  QNYRLLDTTLYVTLEPCVMCAGAMVHSRIGRVVFGARDAKTGAAGSLIDVLHHPGMNHRV 130

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           +I  G+       ++ DFF+ RR
Sbjct: 131 DIIEGVLRDECATLLSDFFRMRR 153


>gi|107103282|ref|ZP_01367200.1| hypothetical protein PaerPA_01004351 [Pseudomonas aeruginosa PACS2]
          Length = 182

 Score = 99.4 bits (246), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 52/126 (41%), Positives = 71/126 (56%)

Query: 24  IPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83
           +PVGAV V   +II R  NR     D +AHAE+LAIRM         LP   LYVTLEPC
Sbjct: 48  VPVGAVLVREGEIIGRGFNRPISSHDPSAHAEMLAIRMAAAEAGNYRLPGSTLYVTLEPC 107

Query: 84  TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQD 143
           +MC+  +  ARI+RL YG   PK G +E+  +F+     +H   +  G+  +   Q++  
Sbjct: 108 SMCSGLLVHARIQRLVYGTVEPKSGAVESRGRFFEQEHLNHRVMVEGGVLAEECSQVLSA 167

Query: 144 FFKERR 149
           FF+ RR
Sbjct: 168 FFRARR 173


>gi|16330356|ref|NP_441084.1| hypothetical protein sll1631 [Synechocystis sp. PCC 6803]
 gi|1652846|dbj|BAA17764.1| sll1631 [Synechocystis sp. PCC 6803]
          Length = 164

 Score = 99.4 bits (246), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 55/144 (38%), Positives = 81/144 (56%), Gaps = 1/144 (0%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           +M  A+  A+ A    EIPVGAV V    ++++   NR +  ++  AHAE+LAI+  CR 
Sbjct: 11  WMQMAIALAEEAGNVGEIPVGAVVVNAMGEVLATGQNRKQRDQNPIAHAEMLAIQTACRR 70

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           L    L E  LYVTLEPC MC  AI  AR+  L YG  +PK G I++       A  +H 
Sbjct: 71  LGHWRLNECTLYVTLEPCPMCTGAIIQARLGLLVYGTPDPKTGTIDSVFDLAASAASNHH 130

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
            +   G+ +++ R+ +QD+F + R
Sbjct: 131 LQSLGGVCQEQCREQLQDWFAQHR 154


>gi|269976007|ref|ZP_06183011.1| tRNA-specific adenosine deaminase [Mobiluncus mulieris 28-1]
 gi|306817398|ref|ZP_07451143.1| tRNA-specific adenosine deaminase [Mobiluncus mulieris ATCC 35239]
 gi|269935835|gb|EEZ92365.1| tRNA-specific adenosine deaminase [Mobiluncus mulieris 28-1]
 gi|304649839|gb|EFM47119.1| tRNA-specific adenosine deaminase [Mobiluncus mulieris ATCC 35239]
          Length = 174

 Score = 99.4 bits (246), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 57/144 (39%), Positives = 80/144 (55%), Gaps = 2/144 (1%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNREL--KDVTAHAEILAIRMGCRI 65
           +  A + A  AA+  ++PVGAV +    I++  G   RE+   D TAHAEI+A+R     
Sbjct: 14  LDTAFDLAARAAVSGDVPVGAVLLTAQGIVAGLGLNQREIPPHDPTAHAEIVAMREAAGR 73

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           L    L    L VTLEPCTMCA AI  ARI RL +GA + K G   +       +  +H 
Sbjct: 74  LRTWNLAGCTLVVTLEPCTMCAGAIVTARISRLIFGAWDSKAGACGSIRDVVRDSRLNHQ 133

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
            E+  G++E+R   ++QDFF +RR
Sbjct: 134 VEVIGGVAEKRGVALLQDFFGKRR 157


>gi|90962204|ref|YP_536120.1| cytosine/adenosine deaminase [Lactobacillus salivarius UCC118]
 gi|301300462|ref|ZP_07206662.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Lactobacillus salivarius ACS-116-V-Col5a]
 gi|90821398|gb|ABE00037.1| Cytosine/adenosine deaminase [Lactobacillus salivarius UCC118]
 gi|300851959|gb|EFK79643.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Lactobacillus salivarius ACS-116-V-Col5a]
          Length = 166

 Score = 99.4 bits (246), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 55/139 (39%), Positives = 76/139 (54%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  AL EA+ AA   E+P+G V V + KII R  N     ++ T HAE+LAI      +
Sbjct: 11  FMKEALFEAKLAAKIGEVPIGCVIVKDGKIIGRGHNLREHSQNATLHAEMLAIEEANETV 70

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
           +   L +  L+VTLEPC MC+ AI  +RI  +YYGAS+PK G +         +  +H  
Sbjct: 71  NSWRLVDTQLFVTLEPCPMCSGAIINSRIPEVYYGASDPKAGTVGTLMNLLEDSRFNHQS 130

Query: 127 EIYPGISEQRSRQIIQDFF 145
            +  GI E     I++DFF
Sbjct: 131 FVEKGILENECASILKDFF 149


>gi|261212078|ref|ZP_05926364.1| tRNA-specific adenosine-34 deaminase [Vibrio sp. RC341]
 gi|260838686|gb|EEX65337.1| tRNA-specific adenosine-34 deaminase [Vibrio sp. RC341]
          Length = 170

 Score = 99.4 bits (246), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 54/143 (37%), Positives = 78/143 (54%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  A+  A  A  + E+PVGAV V + +II+   N +    D TAHAEI  IR    +L
Sbjct: 13  FMRRAITLAAQAEAQGEVPVGAVLVRDGEIIAEGWNCSITHHDATAHAEIEVIRKAGNVL 72

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
           +   L +  LYVTLEPC MCA A+  +R++R+ YGA + K G        ++    +H  
Sbjct: 73  NNYRLLDTTLYVTLEPCPMCAGALLHSRVKRIVYGAPDLKAGAAGTVMDLFSSQAAYHYA 132

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
            +  G+ E+  R  +Q FF+ RR
Sbjct: 133 TVEKGLLEEECRTQLQAFFQRRR 155


>gi|325130078|gb|EGC52865.1| tRNA-specific adenosine deaminase [Neisseria meningitidis
           OX99.30304]
 gi|325138115|gb|EGC60688.1| tRNA-specific adenosine deaminase [Neisseria meningitidis ES14902]
 gi|325142208|gb|EGC64629.1| tRNA-specific adenosine deaminase [Neisseria meningitidis 961-5945]
          Length = 163

 Score = 99.4 bits (246), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 57/143 (39%), Positives = 81/143 (56%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  ALE+A+ +AL  EIPVGAV V + KII+ A N      +V+ HAEI A+      +
Sbjct: 19  FMGLALEQAKLSALMGEIPVGAVIVSDGKIIASAHNTCIADCNVSRHAEINALAQAGSEM 78

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L   D+Y+TLEPC MCA+A+  ARIRR+ YGA+ PK G   +    +     +   
Sbjct: 79  QNYRLDGCDIYITLEPCAMCASALIQARIRRVIYGAAEPKTGAAGSIVNLFADKRLNTHT 138

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
            I  GI ++  R ++  FF+ +R
Sbjct: 139 AIRGGILQEECRAVLSRFFQNKR 161


>gi|307700388|ref|ZP_07637427.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Mobiluncus mulieris FB024-16]
 gi|307614373|gb|EFN93603.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Mobiluncus mulieris FB024-16]
          Length = 174

 Score = 99.4 bits (246), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 57/144 (39%), Positives = 80/144 (55%), Gaps = 2/144 (1%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNREL--KDVTAHAEILAIRMGCRI 65
           +  A + A  AA+  ++PVGAV +    I++  G   RE+   D TAHAEI+A+R     
Sbjct: 14  LDTAFDLAARAAVSGDVPVGAVLLTAQGIVTGLGLNQREIPPHDPTAHAEIVAMREAAGR 73

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           L    L    L VTLEPCTMCA AI  ARI RL +GA + K G   +       +  +H 
Sbjct: 74  LRTWNLAGCTLVVTLEPCTMCAGAIVTARISRLIFGAWDSKAGACGSIRDVVRDSRLNHQ 133

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
            E+  G++E+R   ++QDFF +RR
Sbjct: 134 VEVIGGVAEKRGVALLQDFFGKRR 157


>gi|198245375|ref|YP_002216635.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp.
           enterica serovar Dublin str. CT_02021853]
 gi|197939891|gb|ACH77224.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp.
           enterica serovar Dublin str. CT_02021853]
          Length = 172

 Score = 99.0 bits (245), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 55/143 (38%), Positives = 77/143 (53%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  AL  A+ A    E+PVGAV V N+++I    NR     D TAHAEI+A+R G  +L
Sbjct: 11  WMRHALTLAKRAWDEREVPVGAVLVHNHRVIGEGWNRPIGRHDPTAHAEIMALRQGGLVL 70

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  LYVTLEPC MCA A+  +RI R+ +GA + K G   +          +H  
Sbjct: 71  QNYRLLDTTLYVTLEPCVMCAGAMVHSRIGRVVFGARDAKTGAAGSLIDVLHHPGMNHRV 130

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           +I  G+       ++ DFF+ RR
Sbjct: 131 DIIEGVLRDECATLLSDFFRMRR 153


>gi|187478486|ref|YP_786510.1| zinc-binding cytidine/deoxycytidylate deaminase [Bordetella avium
           197N]
 gi|115423072|emb|CAJ49603.1| putative zinc-binding cytidine/deoxycytidylate deaminase
           [Bordetella avium 197N]
          Length = 157

 Score = 99.0 bits (245), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 56/145 (38%), Positives = 82/145 (56%), Gaps = 1/145 (0%)

Query: 6   VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAG-NRNRELKDVTAHAEILAIRMGCR 64
           ++M  ALE+A+ A  + E+PVGAV V     +  AG NR     D TAHAE++A+R   R
Sbjct: 7   IYMHMALEQARLAYDQGEVPVGAVVVDGEGRVLGAGYNRTILDSDPTAHAEVMALRAASR 66

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
            L+   LP + LYVTLEPC MC  A+  AR+ R+ +GA +PK G   +      +A  +H
Sbjct: 67  HLANYRLPGLTLYVTLEPCVMCIGAMLHARLTRVVFGAHDPKTGACGSVLDVGAVAQLNH 126

Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149
              +  G+       +++ FF+ERR
Sbjct: 127 HTTVVGGVLAPPCGDLLRAFFRERR 151


>gi|330892455|gb|EGH25116.1| cytidine/deoxycytidylate deaminase family protein [Pseudomonas
           syringae pv. mori str. 301020]
 gi|330894515|gb|EGH27176.1| cytidine/deoxycytidylate deaminase family protein [Pseudomonas
           syringae pv. mori str. 301020]
          Length = 169

 Score = 99.0 bits (245), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 51/127 (40%), Positives = 73/127 (57%)

Query: 23  EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEP 82
           E+PVGAV V N +II R  N      D +AHAE++A+R   R L    LP   LYVTLEP
Sbjct: 31  EVPVGAVVVQNGEIIGRGYNCPISASDPSAHAEMVAVRDAARALDNYRLPGSTLYVTLEP 90

Query: 83  CTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQ 142
           C+MCA  I  +R+ R+ YGA  PK G +++  QF++    +H      G+  +    ++ 
Sbjct: 91  CSMCAGLIVHSRVARVVYGALEPKAGIVQSQGQFFSQGFLNHRVLFEGGVLSEECGAMLS 150

Query: 143 DFFKERR 149
           +FF+ RR
Sbjct: 151 EFFRMRR 157


>gi|225869728|ref|YP_002745675.1| deaminase [Streptococcus equi subsp. equi 4047]
 gi|225699132|emb|CAW92326.1| putative deaminase [Streptococcus equi subsp. equi 4047]
          Length = 164

 Score = 99.0 bits (245), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 56/143 (39%), Positives = 78/143 (54%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  AL+EA+ + L++EIP+G V V    II R  N   E      HAEI+AI       
Sbjct: 11  FMREALKEAEKSLLKDEIPIGCVIVKAGHIIGRGHNAREERNQAIMHAEIMAINEANAHE 70

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  L+VT+EPC MC+ AI LARI  + YGASN K GG  +  Q  T    +H  
Sbjct: 71  GNWRLLDTTLFVTIEPCVMCSGAIGLARIPHVVYGASNQKFGGAGSLYQILTDERLNHRV 130

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           ++  G+      +++Q FF++RR
Sbjct: 131 QLEVGLLADDCAKLMQTFFRQRR 153


>gi|283477539|emb|CAY73455.1| tRNA-specific adenosine deaminase [Erwinia pyrifoliae DSM 12163]
          Length = 157

 Score = 99.0 bits (245), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 54/142 (38%), Positives = 77/142 (54%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  AL  A+ A    E+PVGAV VL+ + I    NR     D TAHAE++A+R G +++ 
Sbjct: 1   MRHALRLARRAWDEGEVPVGAVLVLDGQAIGEGWNRPIGQHDPTAHAEMMALRQGGKVIE 60

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
              L +  LYVTLEPC MCA A+   R+ RL YGA + K G   +       A  +H  +
Sbjct: 61  NYRLLDTTLYVTLEPCVMCAGAMIHGRVGRLVYGARDAKTGAAGSLLDVLGHAGMNHHVQ 120

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
           +  G+       ++ DFF++RR
Sbjct: 121 VDCGVLRDECAAMLSDFFRQRR 142


>gi|205353664|ref|YP_002227465.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp.
           enterica serovar Gallinarum str. 287/91]
 gi|207857975|ref|YP_002244626.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp.
           enterica serovar Enteritidis str. P125109]
 gi|205273445|emb|CAR38422.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 287/91]
 gi|206709778|emb|CAR34130.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
 gi|326628768|gb|EGE35111.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp.
           enterica serovar Gallinarum str. 9]
          Length = 183

 Score = 99.0 bits (245), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 55/143 (38%), Positives = 77/143 (53%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  AL  A+ A    E+PVGAV V N+++I    NR     D TAHAEI+A+R G  +L
Sbjct: 22  WMRHALTLAKRAWDEREVPVGAVLVHNHRVIGEGWNRPIGRHDPTAHAEIMALRQGGLVL 81

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  LYVTLEPC MCA A+  +RI R+ +GA + K G   +          +H  
Sbjct: 82  QNYRLLDTTLYVTLEPCVMCAGAMVHSRIGRVVFGARDAKTGAAGSLIDVLHHPGMNHRV 141

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           +I  G+       ++ DFF+ RR
Sbjct: 142 DIIEGVLRDECATLLSDFFRMRR 164


>gi|56412555|ref|YP_149630.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. ATCC 9150]
 gi|197361490|ref|YP_002141126.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. AKU_12601]
 gi|56126812|gb|AAV76318.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|197092966|emb|CAR58397.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
 gi|320087069|emb|CBY96838.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp.
           enterica serovar Weltevreden str. 2007-60-3289-1]
          Length = 183

 Score = 99.0 bits (245), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 55/143 (38%), Positives = 77/143 (53%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  AL  A+ A    E+PVGAV V N+++I    NR     D TAHAEI+A+R G  +L
Sbjct: 22  WMRHALTLAKRAWDEREVPVGAVLVHNHRVIGEGWNRPIGRHDPTAHAEIMALRQGGLVL 81

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  LYVTLEPC MCA A+  +RI R+ +GA + K G   +          +H  
Sbjct: 82  QNYRLLDTTLYVTLEPCVMCAGAMVHSRIGRVVFGARDAKTGAAGSLIDVLHHPGMNHRV 141

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           +I  G+       ++ DFF+ RR
Sbjct: 142 DIIEGVLRDECATLLSDFFRMRR 164


>gi|304405747|ref|ZP_07387405.1| CMP/dCMP deaminase zinc-binding [Paenibacillus curdlanolyticus YK9]
 gi|304344990|gb|EFM10826.1| CMP/dCMP deaminase zinc-binding [Paenibacillus curdlanolyticus YK9]
          Length = 148

 Score = 99.0 bits (245), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 53/142 (37%), Positives = 77/142 (54%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M+ A+EEA+ A    E+P+GAV V N ++I R  N      D TAHAEI+AIR   + + 
Sbjct: 1   MAEAIEEARKAEAIGEVPIGAVIVRNGEVIGRGYNLRETDHDATAHAEIIAIREASKHIE 60

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
              L +  LYVTLEPC MCA AI  +R++R+ YG  +PK G              +H  E
Sbjct: 61  AWRLLDSTLYVTLEPCPMCAGAIVQSRVKRVVYGTHDPKAGCAGTLMNLLQEPRFNHETE 120

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
           +  G+ ++    ++  FF+  R
Sbjct: 121 LTSGVMQEECASLLTTFFRRLR 142


>gi|257487178|ref|ZP_05641219.1| cytidine/deoxycytidylate deaminase family protein [Pseudomonas
           syringae pv. tabaci ATCC 11528]
 gi|331009206|gb|EGH89262.1| cytidine/deoxycytidylate deaminase family protein [Pseudomonas
           syringae pv. tabaci ATCC 11528]
          Length = 169

 Score = 99.0 bits (245), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 51/127 (40%), Positives = 73/127 (57%)

Query: 23  EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEP 82
           E+PVGAV V N +II R  N      D +AHAE++A+R   R L    LP   LYVTLEP
Sbjct: 31  EVPVGAVVVQNGEIIGRGYNCPISASDPSAHAEMVAVRDAARALDNYRLPGSTLYVTLEP 90

Query: 83  CTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQ 142
           C+MCA  I  +R+ R+ YGA  PK G +++  QF++    +H      G+  +    ++ 
Sbjct: 91  CSMCAGLIVHSRVARVVYGALEPKAGIVQSQGQFFSQGFLNHRVLFEGGVLSEECGAMLS 150

Query: 143 DFFKERR 149
           +FF+ RR
Sbjct: 151 EFFRMRR 157


>gi|219870714|ref|YP_002475089.1| tRNA-adenosine deaminase [Haemophilus parasuis SH0165]
 gi|219690918|gb|ACL32141.1| tRNA-adenosine deaminase, cytosine/adenosine deaminases
           [Haemophilus parasuis SH0165]
          Length = 157

 Score = 99.0 bits (245), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 62/143 (43%), Positives = 76/143 (53%), Gaps = 1/143 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  AL  A  A    EIPVGAV V     II    NR   L D TAHAEI AIRM  + +
Sbjct: 1   MQYALSLADKAEAEGEIPVGAVLVDKTGNIIGEGWNRAIILSDPTAHAEIQAIRMAGQQI 60

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  LYVTLEPCTMCA AI  +RI RL +GAS+ K G + +    +     +H  
Sbjct: 61  QNYRLLDTTLYVTLEPCTMCAGAILHSRIGRLVFGASDYKTGALGSRFHLFEDYKMNHFL 120

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           +I  G+      Q I  FF++RR
Sbjct: 121 QIRGGVMANECSQKISAFFRKRR 143


>gi|322514212|ref|ZP_08067274.1| tRNA-specific adenosine deaminase [Actinobacillus ureae ATCC 25976]
 gi|322119905|gb|EFX91914.1| tRNA-specific adenosine deaminase [Actinobacillus ureae ATCC 25976]
          Length = 196

 Score = 99.0 bits (245), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 60/144 (41%), Positives = 81/144 (56%), Gaps = 1/144 (0%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNN-KIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           FM  AL  A  A   +EIPVGAV + ++  II    N+  +L D +AHAE+LAIR   ++
Sbjct: 43  FMQYALALADRAEAIDEIPVGAVLIDSDGNIIGEGWNQVIQLADPSAHAEMLAIRQAGKV 102

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
            +   L    LYVTLEPCTMCA AI  +R+ RL +GAS+ K G I +    +     +H 
Sbjct: 103 QNNYRLLGCTLYVTLEPCTMCAGAILHSRLHRLVFGASDYKTGAIGSRFHLFEDYKMNHF 162

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
            EI  G+  +   Q I  FF+ RR
Sbjct: 163 LEIRGGVLAEDCSQKISRFFQRRR 186


>gi|227876439|ref|ZP_03994551.1| nucleoside deaminase [Mobiluncus mulieris ATCC 35243]
 gi|227842980|gb|EEJ53177.1| nucleoside deaminase [Mobiluncus mulieris ATCC 35243]
          Length = 174

 Score = 99.0 bits (245), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 57/144 (39%), Positives = 80/144 (55%), Gaps = 2/144 (1%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNREL--KDVTAHAEILAIRMGCRI 65
           +  A + A  AA+  ++PVGAV +    I++  G   RE+   D TAHAEI+A+R     
Sbjct: 14  LDTAFDLAARAAVSGDVPVGAVLLTAQGIVAGLGLNQREIPPHDPTAHAEIVAMREAAGR 73

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           L    L    L VTLEPCTMCA AI  ARI RL +GA + K G   +       +  +H 
Sbjct: 74  LRTWNLAGCTLVVTLEPCTMCAGAIVTARISRLIFGAWDSKAGACGSIRDVVRDSRLNHQ 133

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
            E+  G++E+R   ++QDFF +RR
Sbjct: 134 VEVIGGVAEKRGVALLQDFFGKRR 157


>gi|269965211|ref|ZP_06179345.1| zinc-binding domain protein [Vibrio alginolyticus 40B]
 gi|269830197|gb|EEZ84424.1| zinc-binding domain protein [Vibrio alginolyticus 40B]
          Length = 169

 Score = 99.0 bits (245), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 54/142 (38%), Positives = 76/142 (53%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  A+E A+ A    E+PVGAV V + +II+   NR+    D TAHAEI  +R   + L 
Sbjct: 1   MRRAMELAEQAEAEGEVPVGAVLVKDGEIIAEGWNRSIGTNDATAHAEIQTLRKAGQKLE 60

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
              L +  LYVTLEPC MCA A+  +R++R+ +GA + K G        +     +H   
Sbjct: 61  NYRLLDTTLYVTLEPCPMCAGALLHSRVKRVVFGAPDLKAGAAGTVLNLFESQAAYHYAL 120

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
           +  G+ E   R  +Q FFK RR
Sbjct: 121 VEKGLLEDECRTQLQAFFKRRR 142


>gi|309380104|emb|CBX21515.1| unnamed protein product [Neisseria lactamica Y92-1009]
          Length = 239

 Score = 99.0 bits (245), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 57/143 (39%), Positives = 81/143 (56%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  ALE+A+ +AL  EIPVGAV V + KII+ A N      +V+ HAEI A+      +
Sbjct: 95  FMGLALEQAKLSALMGEIPVGAVIVSDGKIIASAHNTCIADCNVSRHAEINALAQAGSEM 154

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L   D+Y+TLEPC MCA+A+  ARIRR+ YGA+ PK G   +    +     +   
Sbjct: 155 QNYRLDGCDIYITLEPCAMCASALIQARIRRVIYGAAEPKTGAAGSIVNLFADKRLNTHS 214

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
            I  GI ++  R ++  FF+ +R
Sbjct: 215 AIRGGILQEECRAVLSRFFQNKR 237


>gi|153853556|ref|ZP_01994936.1| hypothetical protein DORLON_00926 [Dorea longicatena DSM 13814]
 gi|149753711|gb|EDM63642.1| hypothetical protein DORLON_00926 [Dorea longicatena DSM 13814]
          Length = 169

 Score = 99.0 bits (245), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 50/143 (34%), Positives = 80/143 (55%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  A+++A+ A    E+P+G V V  +KII R  NR     +  AHAE++AI+   + +
Sbjct: 10  YMKEAIKQAKKAYAIGEVPIGCVIVYQDKIIGRGYNRRTIDNNTLAHAELIAIKKASKKM 69

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
           +   L +  +YVTLEPC MC+ AI  +R+ R+  G  NPK G   +      +   +H  
Sbjct: 70  NDWRLEDCTMYVTLEPCQMCSGAIVQSRMTRVVVGCMNPKAGCAGSILNLLDIPEFNHQV 129

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+  G+ E+   Q+++ FFKE R
Sbjct: 130 ELTTGVMEEECSQMMKSFFKELR 152


>gi|121634737|ref|YP_974982.1| putative cytosine deaminase [Neisseria meningitidis FAM18]
 gi|120866443|emb|CAM10189.1| putative cytosine deaminase (EC 3.5.4.1) [Neisseria meningitidis
           FAM18]
 gi|325132183|gb|EGC54879.1| tRNA-specific adenosine deaminase [Neisseria meningitidis M6190]
 gi|325136130|gb|EGC58739.1| tRNA-specific adenosine deaminase [Neisseria meningitidis M0579]
 gi|325198167|gb|ADY93623.1| tRNA-specific adenosine deaminase [Neisseria meningitidis G2136]
 gi|325202278|gb|ADY97732.1| tRNA-specific adenosine deaminase [Neisseria meningitidis
           M01-240149]
          Length = 239

 Score = 99.0 bits (245), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 57/143 (39%), Positives = 81/143 (56%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  ALE+A+ +AL  EIPVGAV V + KII+ A N      +V+ HAEI A+      +
Sbjct: 95  FMGLALEQAKLSALMGEIPVGAVIVSDGKIIASAHNTCIADCNVSRHAEINALAQAGSEM 154

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L   D+Y+TLEPC MCA+A+  ARIRR+ YGA+ PK G   +    +     +   
Sbjct: 155 QNYRLDGCDIYITLEPCAMCASALIQARIRRVIYGAAEPKTGAAGSIVNLFADKRLNTHT 214

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
            I  GI ++  R ++  FF+ +R
Sbjct: 215 AIRGGILQEECRAVLSRFFQNKR 237


>gi|284046792|ref|YP_003397132.1| CMP/dCMP deaminase zinc-binding protein [Conexibacter woesei DSM
           14684]
 gi|283951013|gb|ADB53757.1| CMP/dCMP deaminase zinc-binding protein [Conexibacter woesei DSM
           14684]
          Length = 154

 Score = 99.0 bits (245), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 54/148 (36%), Positives = 81/148 (54%), Gaps = 2/148 (1%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELK-DVTAHAEILAIRM 61
           +   +M  A+ EA  A   +++PVGAV V + ++++  G+  REL+ D TAHAE +A+R 
Sbjct: 8   RDEYYMRLAMREADRALEHDDVPVGAVVVHDGEVVA-TGHNERELRQDPTAHAEAIALRE 66

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
             R L    + +  LYVTLEPC MCA AI LAR+ R+ +G  +PK G   +         
Sbjct: 67  AARHLGSWRVLDTVLYVTLEPCAMCAGAIVLARVPRVVFGTWDPKAGAAGSVLDVLDQPQ 126

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H PE+  G+        ++ FF  RR
Sbjct: 127 LNHRPEVDGGLLADECAAQLRAFFASRR 154


>gi|312131614|ref|YP_003998954.1| cmp/dcmp deaminase zinc-binding protein [Leadbetterella byssophila
           DSM 17132]
 gi|311908160|gb|ADQ18601.1| CMP/dCMP deaminase zinc-binding protein [Leadbetterella byssophila
           DSM 17132]
          Length = 153

 Score = 98.6 bits (244), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 53/144 (36%), Positives = 81/144 (56%), Gaps = 6/144 (4%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNK-IISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           FM  AL  A+ A  + EIPVGA+ V + K II +  N+  +L DVTAHAEILA+    + 
Sbjct: 14  FMQKALTLAEEAFDQGEIPVGALVVADGKTIIGKGYNQTEKLTDVTAHAEILALSAASQY 73

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           L  + L +  LYVTLEPC MCA A++ +++ R+ + AS+ K      G   +  +  H  
Sbjct: 74  LGAKYLKDCTLYVTLEPCMMCAGALAWSQVSRIVFAASDEK-----RGFSLWEPSVLHPK 128

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
            E+  G+    +  +++ FF+  R
Sbjct: 129 TEVIKGVLANEAGALLKAFFRRLR 152


>gi|261401120|ref|ZP_05987245.1| tRNA-specific adenosine deaminase [Neisseria lactamica ATCC 23970]
 gi|269208892|gb|EEZ75347.1| tRNA-specific adenosine deaminase [Neisseria lactamica ATCC 23970]
          Length = 239

 Score = 98.6 bits (244), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 57/143 (39%), Positives = 81/143 (56%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  ALE+A+ +AL  EIPVGAV V + KII+ A N      +V+ HAEI A+      +
Sbjct: 95  FMGLALEQAKLSALMGEIPVGAVIVSDGKIIASAHNTCIADCNVSRHAEINALAQAGSEM 154

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L   D+Y+TLEPC MCA+A+  ARIRR+ YGA+ PK G   +    +     +   
Sbjct: 155 QNYRLDGCDIYITLEPCAMCASALIQARIRRVIYGAAEPKTGAAGSIVNLFADKRLNTHT 214

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
            I  GI ++  R ++  FF+ +R
Sbjct: 215 AIRGGILQEECRAVLSRFFQNKR 237


>gi|331005351|ref|ZP_08328736.1| tRNA-specific adenosine-34 deaminase [gamma proteobacterium
           IMCC1989]
 gi|330420848|gb|EGG95129.1| tRNA-specific adenosine-34 deaminase [gamma proteobacterium
           IMCC1989]
          Length = 158

 Score = 98.6 bits (244), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 58/128 (45%), Positives = 71/128 (55%)

Query: 22  NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81
           +EIPVGAV V +N+II    N+   L D TAHAEI A+R     +    L    LYVTLE
Sbjct: 24  DEIPVGAVVVKDNEIIGSGFNQPISLCDPTAHAEIQALRNAANHIGNYRLNSATLYVTLE 83

Query: 82  PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141
           PC MCA AI  +RI RL YGA+ PK G I + TQ    A  +H      G+  +   +II
Sbjct: 84  PCGMCAGAIVHSRIARLVYGATEPKAGVIVSQTQQLDKAYLNHKVLYQGGVCAEECSEII 143

Query: 142 QDFFKERR 149
             FF  RR
Sbjct: 144 SVFFSRRR 151


>gi|291537693|emb|CBL10805.1| Cytosine/adenosine deaminases [Roseburia intestinalis M50/1]
          Length = 154

 Score = 98.6 bits (244), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 51/149 (34%), Positives = 80/149 (53%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M +   +M  A+ +A+ A   +E+P+G V V ++KII+R  NR     +  AHAE+ AIR
Sbjct: 1   MNQDEKYMKAAIRQAKKAYALDEVPIGCVIVQDDKIIARGYNRRNTEGNTLAHAELTAIR 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              +      L +  +YVTLEPC MCA AI  +R++++  G+ NPK G   +      + 
Sbjct: 61  KASKKTGDWRLEDCTMYVTLEPCQMCAGAIVQSRMKKVVIGSMNPKAGCAGSVLNLLQMQ 120

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  EI  G+  +    ++  FFKE R
Sbjct: 121 QFNHQVEIEKGVLGEECSAMLSTFFKELR 149


>gi|225026664|ref|ZP_03715856.1| hypothetical protein EUBHAL_00916 [Eubacterium hallii DSM 3353]
 gi|224956034|gb|EEG37243.1| hypothetical protein EUBHAL_00916 [Eubacterium hallii DSM 3353]
          Length = 178

 Score = 98.6 bits (244), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 49/143 (34%), Positives = 82/143 (57%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  A+++A+ A    ++P+G V V + KII+R  N+  + K V AHAE+LA++  C+ L
Sbjct: 15  FMKEAIKQAKKAEAIGDVPIGCVIVHDGKIIARGYNKRNKDKTVLAHAELLAMKKACKKL 74

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  +Y+TLEPC MCA AI  AR+ R+  G+ N K G   +      +   +H  
Sbjct: 75  GDWRLEDCTMYITLEPCQMCAGAIVQARVTRVVIGSMNAKAGCGGSILNLLEMQEFNHQA 134

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+  G+ ++   +++  FF++ R
Sbjct: 135 EVERGVLQEECSEMLSAFFRKLR 157


>gi|330975928|gb|EGH75994.1| cytidine/deoxycytidylate deaminase, zinc-binding region
           [Pseudomonas syringae pv. aptata str. DSM 50252]
          Length = 169

 Score = 98.6 bits (244), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 52/127 (40%), Positives = 74/127 (58%)

Query: 23  EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEP 82
           E+PVGAV V N +II R  N      D +AHAE++AIR   + L    LP   LYVTLEP
Sbjct: 31  EVPVGAVVVQNGEIIGRGYNCPISGSDPSAHAEMVAIRDAAKALDNYRLPGSTLYVTLEP 90

Query: 83  CTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQ 142
           C+MCA  I  +R+ R+ YGA  PK G +++  QF++ A  +H      G+  +    ++ 
Sbjct: 91  CSMCAGLIVHSRVARVVYGALEPKAGIVQSQGQFFSQAFLNHRVVFEGGVLGEECGTMLS 150

Query: 143 DFFKERR 149
           +FF+ RR
Sbjct: 151 EFFRMRR 157


>gi|221133296|ref|ZP_03559601.1| CMP/dCMP deaminase, zinc-binding protein [Glaciecola sp. HTCC2999]
          Length = 175

 Score = 98.6 bits (244), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 59/152 (38%), Positives = 86/152 (56%), Gaps = 6/152 (3%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M++  ++M+ AL  A  A    E+PVGAV VL+N+II    NR+    D   HAEI+AI+
Sbjct: 7   MEQDELWMTHALSLADKAQQTGEVPVGAVIVLDNQIIGEGYNRSIINHDPCGHAEIMAIQ 66

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPK---GGGIENGTQFY 117
              + ++   + +  +YVTLEPC MCA AI  AR++R+ +GAS+ K    G I N  Q  
Sbjct: 67  SAAQHINNYRILDATMYVTLEPCAMCAGAIVHARMKRVVFGASDLKTGCAGSILNLLQHD 126

Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
            L   +H  E+  G+  +     I  FFK+RR
Sbjct: 127 KL---NHQVELQRGVLSELCSAKISQFFKDRR 155


>gi|82702354|ref|YP_411920.1| cytidine/deoxycytidylate deaminase, zinc-binding region
           [Nitrosospira multiformis ATCC 25196]
 gi|82410419|gb|ABB74528.1| tRNA-adenosine deaminase [Nitrosospira multiformis ATCC 25196]
          Length = 163

 Score = 98.6 bits (244), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 56/143 (39%), Positives = 75/143 (52%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  ALE +  A    E+PVGA+ V N  I+ R  N      D TAHAE++A+R   R L
Sbjct: 8   FMHVALELSAQAEQAGEVPVGAIVVRNGTIVGRGYNCPISTSDPTAHAEVMALRDAGRHL 67

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  LYVTLEPC MC  AI  ARI RL YGA++PK G   +          +H  
Sbjct: 68  GNYRLGDCTLYVTLEPCAMCMGAIFHARIARLVYGAADPKTGACGSVINLSAELRLNHHL 127

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           ++  G+  +     ++ FF +RR
Sbjct: 128 QVTRGVLAEEGGYKLKQFFAKRR 150


>gi|323705214|ref|ZP_08116790.1| CMP/dCMP deaminase, zinc-binding [Thermoanaerobacterium
           xylanolyticum LX-11]
 gi|323535640|gb|EGB25415.1| CMP/dCMP deaminase, zinc-binding [Thermoanaerobacterium
           xylanolyticum LX-11]
          Length = 137

 Score = 98.6 bits (244), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 59/142 (41%), Positives = 77/142 (54%), Gaps = 5/142 (3%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  A++EA  +    E+PVGAV V +  II R  N     KD T HAEI AI+  C+ + 
Sbjct: 1   MKAAIDEAIISFKLGEMPVGAVVVKDGIIIGRGYNLKETEKDATQHAEINAIKDACKSIG 60

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
              L    LYVTLEPC MCA AI  +RI+R+Y GA +   G    GT +  L   +   E
Sbjct: 61  DWRLNGASLYVTLEPCPMCAGAIIESRIKRVYVGAESRDNGA--AGTVYDLL---NKKAE 115

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
           +Y GI E   +++I DFF   R
Sbjct: 116 VYFGIMEDECKKLINDFFSRLR 137


>gi|303251559|ref|ZP_07337733.1| tRNA-specific adenosine deaminase [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
 gi|303252205|ref|ZP_07338373.1| tRNA-specific adenosine deaminase [Actinobacillus pleuropneumoniae
           serovar 2 str. 4226]
 gi|302648988|gb|EFL79176.1| tRNA-specific adenosine deaminase [Actinobacillus pleuropneumoniae
           serovar 2 str. 4226]
 gi|302649557|gb|EFL79739.1| tRNA-specific adenosine deaminase [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
          Length = 174

 Score = 98.6 bits (244), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 61/140 (43%), Positives = 77/140 (55%), Gaps = 1/140 (0%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           FM  ALE A  A    EIPVGAV V     II    N+  +L D +AHAE+LAIR   ++
Sbjct: 21  FMRYALELADRAEAIGEIPVGAVLVDQEGNIIGEGWNQVIQLSDPSAHAEMLAIRQAGKV 80

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
                L +  LYVTLEPCTMCA AI  +R+RRL +GAS+ K G I +    +     +H 
Sbjct: 81  QRNYRLLDCTLYVTLEPCTMCAGAILHSRLRRLVFGASDYKTGAIGSRFHLFEDYKMNHF 140

Query: 126 PEIYPGISEQRSRQIIQDFF 145
            EI  G+  +   Q I  FF
Sbjct: 141 LEIRGGVLAEECSQKISRFF 160


>gi|229828779|ref|ZP_04454848.1| hypothetical protein GCWU000342_00853 [Shuttleworthia satelles DSM
           14600]
 gi|229793373|gb|EEP29487.1| hypothetical protein GCWU000342_00853 [Shuttleworthia satelles DSM
           14600]
          Length = 154

 Score = 98.6 bits (244), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 57/142 (40%), Positives = 73/142 (51%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  A+ +A+ A    E+P+G V     KII+R  NR      V  HAEI AI+  CR L 
Sbjct: 1   MKEAIRQARKAEAIEEVPIGCVIEREGKIIARGYNRRNIDHSVLKHAEITAIQKACRKLG 60

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
              L +  LYVTLEPC MCA AI  ARI R+  GA NPK G   +      +   +H  E
Sbjct: 61  DWRLEDCTLYVTLEPCQMCAGAIVQARIPRVVIGAMNPKAGSAGSVINLLQMREFNHQAE 120

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
           I  G+ E+    ++  FF E R
Sbjct: 121 IEKGVMEEDCSALLSHFFAELR 142


>gi|165975988|ref|YP_001651581.1| tRNA-specific adenosine deaminase [Actinobacillus pleuropneumoniae
           serovar 3 str. JL03]
 gi|190149887|ref|YP_001968412.1| tRNA-specific adenosine deaminase [Actinobacillus pleuropneumoniae
           serovar 7 str. AP76]
 gi|307247548|ref|ZP_07529592.1| tRNA-specific adenosine deaminase [Actinobacillus pleuropneumoniae
           serovar 2 str. S1536]
 gi|307252128|ref|ZP_07534027.1| tRNA-specific adenosine deaminase [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
 gi|307256596|ref|ZP_07538377.1| tRNA-specific adenosine deaminase [Actinobacillus pleuropneumoniae
           serovar 10 str. D13039]
 gi|307261030|ref|ZP_07542712.1| tRNA-specific adenosine deaminase [Actinobacillus pleuropneumoniae
           serovar 12 str. 1096]
 gi|307263211|ref|ZP_07544831.1| tRNA-specific adenosine deaminase [Actinobacillus pleuropneumoniae
           serovar 13 str. N273]
 gi|165876089|gb|ABY69137.1| tRNA-specific adenosine deaminase [Actinobacillus pleuropneumoniae
           serovar 3 str. JL03]
 gi|189915018|gb|ACE61270.1| tRNA-specific adenosine deaminase [Actinobacillus pleuropneumoniae
           serovar 7 str. AP76]
 gi|306855913|gb|EFM88072.1| tRNA-specific adenosine deaminase [Actinobacillus pleuropneumoniae
           serovar 2 str. S1536]
 gi|306860428|gb|EFM92442.1| tRNA-specific adenosine deaminase [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
 gi|306865006|gb|EFM96908.1| tRNA-specific adenosine deaminase [Actinobacillus pleuropneumoniae
           serovar 10 str. D13039]
 gi|306869332|gb|EFN01127.1| tRNA-specific adenosine deaminase [Actinobacillus pleuropneumoniae
           serovar 12 str. 1096]
 gi|306871428|gb|EFN03152.1| tRNA-specific adenosine deaminase [Actinobacillus pleuropneumoniae
           serovar 13 str. N273]
          Length = 196

 Score = 98.6 bits (244), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 61/140 (43%), Positives = 77/140 (55%), Gaps = 1/140 (0%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           FM  ALE A  A    EIPVGAV V     II    N+  +L D +AHAE+LAIR   ++
Sbjct: 43  FMRYALELADRAEAIGEIPVGAVLVDQEGNIIGEGWNQVIQLSDPSAHAEMLAIRQAGKV 102

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
                L +  LYVTLEPCTMCA AI  +R+RRL +GAS+ K G I +    +     +H 
Sbjct: 103 QRNYRLLDCTLYVTLEPCTMCAGAILHSRLRRLVFGASDYKTGAIGSRFHLFEDYKMNHF 162

Query: 126 PEIYPGISEQRSRQIIQDFF 145
            EI  G+  +   Q I  FF
Sbjct: 163 LEIRGGVLAEECSQKISRFF 182


>gi|297620926|ref|YP_003709063.1| tRNA-specific adenosine deaminase [Waddlia chondrophila WSU
           86-1044]
 gi|297376227|gb|ADI38057.1| tRNA-specific adenosine deaminase [Waddlia chondrophila WSU
           86-1044]
          Length = 176

 Score = 98.6 bits (244), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 55/146 (37%), Positives = 81/146 (55%), Gaps = 4/146 (2%)

Query: 6   VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
            +M  AL+EA  A ++ E+PVGA+ V   K+I+R  N+   L+D TAHAE+L I +    
Sbjct: 21  TYMLAALKEAWKAFVKGEVPVGAILVKEGKVIARGHNQVEMLRDATAHAEMLCITVAEAA 80

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH-- 123
                L    LY T+EPC+MCA A+ L+R+  L +GA + + G   NG+        H  
Sbjct: 81  EDNWRLNGATLYCTIEPCSMCAGAMLLSRVSTLVWGAPDIRHGA--NGSWVNLFGKPHPT 138

Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149
           H  ++  GI       ++QDFFK+RR
Sbjct: 139 HEIQVRNGILADFCAMLMQDFFKKRR 164


>gi|289677917|ref|ZP_06498807.1| cytidine/deoxycytidylate deaminase, zinc-binding region
           [Pseudomonas syringae pv. syringae FF5]
 gi|330895911|gb|EGH28196.1| cytidine/deoxycytidylate deaminase, zinc-binding region
           [Pseudomonas syringae pv. japonica str. M301072PT]
          Length = 170

 Score = 98.6 bits (244), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 52/127 (40%), Positives = 74/127 (58%)

Query: 23  EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEP 82
           E+PVGAV V N +II R  N      D +AHAE++AIR   + L    LP   LYVTLEP
Sbjct: 32  EVPVGAVVVQNGEIIGRGYNCPISGSDPSAHAEMVAIRDAAKALDNYRLPGSTLYVTLEP 91

Query: 83  CTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQ 142
           C+MCA  I  +R+ R+ YGA  PK G +++  QF++ A  +H      G+  +    ++ 
Sbjct: 92  CSMCAGLIVHSRVARVVYGALEPKAGIVQSQGQFFSQAFLNHRVLFEGGVLGEECGTMLS 151

Query: 143 DFFKERR 149
           +FF+ RR
Sbjct: 152 EFFRMRR 158


>gi|222152093|ref|YP_002561253.1| hypothetical protein MCCL_1850 [Macrococcus caseolyticus JCSC5402]
 gi|222121222|dbj|BAH18557.1| conserved hypothetical protein [Macrococcus caseolyticus JCSC5402]
          Length = 161

 Score = 98.6 bits (244), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 50/144 (34%), Positives = 79/144 (54%)

Query: 6   VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           +FM  A++EA+ A   NE+P+GAV + + ++I R  N     ++   HAE++AI    + 
Sbjct: 5   IFMQMAIDEAKKAYKINEVPIGAVVIKHGEVIGRGHNLRESSQNPLMHAEVVAINEASKN 64

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           +    L E  LYVTLEPC MC+ AI ++RI  + YGA + KGG   +       +  +H 
Sbjct: 65  IGSWRLEECVLYVTLEPCVMCSGAIVMSRIPTVVYGAHDAKGGCSGSLMNLLHESRFNHQ 124

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
             +  GI  +    +++DFFK  R
Sbjct: 125 ATVIAGIKHEECSMLLKDFFKSLR 148


>gi|330969043|gb|EGH69109.1| cytidine/deoxycytidylate deaminase, zinc-binding region
           [Pseudomonas syringae pv. aceris str. M302273PT]
          Length = 169

 Score = 98.6 bits (244), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 59/147 (40%), Positives = 82/147 (55%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
           K   FM  AL  A   AL  E+PVGAV V N +I+ R  N      D +AHAE++AIR  
Sbjct: 11  KDQYFMHEALALAAQGALLGEVPVGAVVVQNGEIVGRGYNCPISGSDPSAHAEMVAIRDA 70

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
            + L    LP   LYVTLEPC+MCA  I  +R+ R+ YGA  PK G +++  QF++ A  
Sbjct: 71  AKALDNYRLPGSTLYVTLEPCSMCAGLIVHSRVTRVVYGALEPKAGIVQSQGQFFSQAFL 130

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H      G+  +    ++ +FF+ RR
Sbjct: 131 NHRVLFEGGVLGEECGTMLSEFFRMRR 157


>gi|302384616|ref|YP_003820438.1| CMP/dCMP deaminase zinc-binding protein [Clostridium
           saccharolyticum WM1]
 gi|302195244|gb|ADL02815.1| CMP/dCMP deaminase zinc-binding protein [Clostridium
           saccharolyticum WM1]
          Length = 164

 Score = 98.6 bits (244), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 54/143 (37%), Positives = 76/143 (53%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  A+ +A+ A    E+P+G V V  +KII+R  NR    K+V +HAEI AIR  CR +
Sbjct: 7   YMRAAIRQAEKAGAMGEVPIGCVIVYEDKIIARGYNRRTIDKNVLSHAEINAIRKACRKV 66

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L    +YVTLEPC MCA AI  ARI ++  G  N K G   +    +     +H  
Sbjct: 67  GDWRLEGCTMYVTLEPCPMCAGAIVQARIPKVIMGCMNAKAGCAGSVLDLFHQDGLNHQV 126

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E   G+      ++++DFFK  R
Sbjct: 127 ETESGVLGDECSRLMKDFFKALR 149


>gi|239930296|ref|ZP_04687249.1| cytidine/deoxycytidine deaminase [Streptomyces ghanaensis ATCC
           14672]
 gi|291438644|ref|ZP_06578034.1| cytidine/deoxycytidine deaminase [Streptomyces ghanaensis ATCC
           14672]
 gi|291341539|gb|EFE68495.1| cytidine/deoxycytidine deaminase [Streptomyces ghanaensis ATCC
           14672]
          Length = 161

 Score = 98.6 bits (244), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 54/143 (37%), Positives = 78/143 (54%), Gaps = 2/143 (1%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNN--KIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M  AL+EA+ A    ++PVGAV +  +   +++R  N      D TAHAE+LA+R     
Sbjct: 19  MRLALDEAERAVRGGDVPVGAVVLAPDGTTVLARGHNEREAAGDPTAHAEVLAVRRAAAE 78

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           L Q  L    L VTLEPCTMCA AI  AR+ R+ YGA + K G   +          +H 
Sbjct: 79  LGQWRLAGCTLVVTLEPCTMCAGAIQQARVDRVVYGARDEKAGAAGSLWDLLRDRRLNHR 138

Query: 126 PEIYPGISEQRSRQIIQDFFKER 148
           PE+  G+  +   +++ +FF+ER
Sbjct: 139 PEVVEGVLAEECARLLTEFFRER 161


>gi|66044515|ref|YP_234356.1| cytidine/deoxycytidylate deaminase, zinc-binding region
           [Pseudomonas syringae pv. syringae B728a]
 gi|63255222|gb|AAY36318.1| Cytidine/deoxycytidylate deaminase, zinc-binding region
           [Pseudomonas syringae pv. syringae B728a]
          Length = 169

 Score = 98.6 bits (244), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 52/127 (40%), Positives = 74/127 (58%)

Query: 23  EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEP 82
           E+PVGAV V N +II R  N      D +AHAE++AIR   + L    LP   LYVTLEP
Sbjct: 31  EVPVGAVVVQNGEIIGRGYNCPISGSDPSAHAEMVAIRDAAKALDNYRLPGSTLYVTLEP 90

Query: 83  CTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQ 142
           C+MCA  I  +R+ R+ YGA  PK G +++  QF++ A  +H      G+  +    ++ 
Sbjct: 91  CSMCAGLIVHSRVARVVYGALEPKAGIVQSQGQFFSQAFLNHRVLFEGGVLGEECGTMLS 150

Query: 143 DFFKERR 149
           +FF+ RR
Sbjct: 151 EFFRMRR 157


>gi|46143725|ref|ZP_00134574.2| COG0590: Cytosine/adenosine deaminases [Actinobacillus
           pleuropneumoniae serovar 1 str. 4074]
 gi|126208056|ref|YP_001053281.1| tRNA-specific adenosine deaminase [Actinobacillus pleuropneumoniae
           L20]
 gi|126096848|gb|ABN73676.1| tRNA-specific adenosine deaminase [Actinobacillus pleuropneumoniae
           serovar 5b str. L20]
          Length = 189

 Score = 98.6 bits (244), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 61/140 (43%), Positives = 77/140 (55%), Gaps = 1/140 (0%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           FM  ALE A  A    EIPVGAV V     II    N+  +L D +AHAE+LAIR   ++
Sbjct: 36  FMRYALELADRAEAIGEIPVGAVLVDQEGNIIGEGWNQVIQLSDPSAHAEMLAIRQAGKV 95

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
                L +  LYVTLEPCTMCA AI  +R+RRL +GAS+ K G I +    +     +H 
Sbjct: 96  QRNYRLLDCTLYVTLEPCTMCAGAILHSRLRRLVFGASDYKTGAIGSRFHLFEDYKMNHF 155

Query: 126 PEIYPGISEQRSRQIIQDFF 145
            EI  G+  +   Q I  FF
Sbjct: 156 LEIRGGVLAEECSQKISRFF 175


>gi|86738996|ref|YP_479396.1| tRNA-adenosine deaminase [Frankia sp. CcI3]
 gi|86565858|gb|ABD09667.1| tRNA-adenosine deaminase [Frankia sp. CcI3]
          Length = 176

 Score = 98.2 bits (243), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 56/143 (39%), Positives = 76/143 (53%), Gaps = 1/143 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNREL-KDVTAHAEILAIRMGCRIL 66
           M  AL EA+ A    ++PVGA+ V  +  +   G+  RE   D TAHAE++A+R   R  
Sbjct: 29  MGLALREARLAPDHADVPVGALVVTEDGTVLGLGHNERERGADPTAHAEMIALRAAARRT 88

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               LP   L VTLEPCTMCA A+ LAR+ RL YGA + K G + +          +H P
Sbjct: 89  GSWRLPGATLVVTLEPCTMCAGALVLARVDRLVYGAVDEKAGAVGSLWDVVRDRRLNHRP 148

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+  GI       ++ +FF  RR
Sbjct: 149 EVVAGIRADECGALLAEFFAARR 171


>gi|330950762|gb|EGH51022.1| cytidine/deoxycytidylate deaminase, zinc-binding region
           [Pseudomonas syringae Cit 7]
          Length = 167

 Score = 98.2 bits (243), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 60/147 (40%), Positives = 82/147 (55%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
           K   FM  AL  A   AL  E+PVGAV V N +II R  N      D +AHAE++AIR  
Sbjct: 11  KDQYFMREALALAAQGALLGEVPVGAVLVQNGEIIGRGYNCPISGSDPSAHAEMVAIRDA 70

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
            + L    LP   LYVTLEPC+MCA  I  +R+ R+ YGA  PK G +++  QF++ A  
Sbjct: 71  AKTLDNYRLPGSTLYVTLEPCSMCAGLIVHSRVARVVYGALEPKAGIVQSQGQFFSQAFL 130

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H      G+  +    ++ +FF+ RR
Sbjct: 131 NHRVLFEGGVLGEECGTMLSEFFRMRR 157


>gi|324998977|ref|ZP_08120089.1| cytidine/deoxycytidylate deaminase [Pseudonocardia sp. P1]
          Length = 157

 Score = 98.2 bits (243), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 52/136 (38%), Positives = 76/136 (55%), Gaps = 1/136 (0%)

Query: 11  ALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQE 69
           ALE A+ AA  +++P+GAV +  +   ++ A N    L D TAHAE+LA+R   R++   
Sbjct: 13  ALEVARGAAASDDVPIGAVVLDADGTELAAACNAREALGDPTAHAEVLALRAAARVVGSW 72

Query: 70  ILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIY 129
            L    L VT+EPCTMCA AI LAR+ R+ +GA  PK G   +           H PE+ 
Sbjct: 73  RLTGTTLAVTVEPCTMCAGAIGLARVERVVFGAWEPKTGAAGSLWDVLRDRRLSHRPEVV 132

Query: 130 PGISEQRSRQIIQDFF 145
            G+    +  ++Q+FF
Sbjct: 133 GGVRAGEAAALLQEFF 148


>gi|238922727|ref|YP_002936240.1| cytidine and deoxycytidylate deaminase family protein [Eubacterium
           rectale ATCC 33656]
 gi|238874399|gb|ACR74106.1| cytidine and deoxycytidylate deaminase family protein [Eubacterium
           rectale ATCC 33656]
          Length = 162

 Score = 98.2 bits (243), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 56/149 (37%), Positives = 78/149 (52%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M +   +M  A+++A+ A   +E+P+G V V  +KII+R  NR    K+  AHAE+ AIR
Sbjct: 6   MTQDEKYMKQAIKQAKKAYALDEVPIGCVIVAGDKIIARGYNRRNTDKNPLAHAELSAIR 65

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              +      L E  +YVTLEPC MCA AI  ARI R+  GA NPK G   +      + 
Sbjct: 66  KASKKTGDWRLEECTMYVTLEPCQMCAGAIVQARIPRVVIGAMNPKAGCAGSIINLLQMQ 125

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  +   GI       ++  FFKE R
Sbjct: 126 QFNHQVQTDIGICGDECSTMLSTFFKELR 154


>gi|271970484|ref|YP_003344680.1| CMP/dCMP deaminase zinc-binding protein [Streptosporangium roseum
           DSM 43021]
 gi|270513659|gb|ACZ91937.1| CMP/dCMP deaminase zinc-binding protein [Streptosporangium roseum
           DSM 43021]
          Length = 154

 Score = 98.2 bits (243), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 52/128 (40%), Positives = 73/128 (57%), Gaps = 1/128 (0%)

Query: 23  EIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81
           E+PVGAV +  +  +++RAGN    L D TAHAE+LA+R   R   +  L    L VTLE
Sbjct: 23  EVPVGAVVLGPDGSVLARAGNDRESLNDPTAHAEVLALREAARARGEWRLTGCTLVVTLE 82

Query: 82  PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141
           PCTMCA A  LAR+ R+ YGA++ KGG   +          +H PE+  G+  +    ++
Sbjct: 83  PCTMCAGASVLARVDRIVYGATDAKGGAAGSLWDVVRDRRLNHRPEVVMGVLAEECAGVL 142

Query: 142 QDFFKERR 149
            +FF  RR
Sbjct: 143 TEFFTVRR 150


>gi|229525486|ref|ZP_04414891.1| tRNA-specific adenosine-34 deaminase [Vibrio cholerae bv. albensis
           VL426]
 gi|229339067|gb|EEO04084.1| tRNA-specific adenosine-34 deaminase [Vibrio cholerae bv. albensis
           VL426]
          Length = 193

 Score = 98.2 bits (243), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 50/129 (38%), Positives = 73/129 (56%)

Query: 21  RNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80
           + E+PVGAV V + +II+   N +    D TAHAEI  IR   ++LS   L +  LYVTL
Sbjct: 45  QGEVPVGAVLVRDGEIIAEGWNSSITNHDATAHAEIEVIRKAGKVLSNYRLLDTTLYVTL 104

Query: 81  EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140
           EPC MCA A+  +R++R+ YGA + K G        ++    +H   +  G+ E+  R  
Sbjct: 105 EPCPMCAGALLHSRVKRIVYGAPDLKAGAAGTVMDLFSSQAAYHYATVEKGLLEEECRAQ 164

Query: 141 IQDFFKERR 149
           +Q FF+ RR
Sbjct: 165 LQAFFQRRR 173


>gi|51891149|ref|YP_073840.1| putative Cu-binding protein [Symbiobacterium thermophilum IAM
           14863]
 gi|51854838|dbj|BAD38996.1| putative Cu-binding protein [Symbiobacterium thermophilum IAM
           14863]
          Length = 152

 Score = 98.2 bits (243), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 50/128 (39%), Positives = 74/128 (57%)

Query: 22  NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81
            E+P+GAV V +++I+ R  N      D TAHAE+LAIR   R+L    L    LYVT+E
Sbjct: 21  GEVPIGAVIVRDSEILVRTHNLRETTHDATAHAEVLAIREAGRLLGGWRLTGCTLYVTIE 80

Query: 82  PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141
           PC MCA A+  +RI R+ +GA +PK     +  +F      +H  E+  G+  +   ++I
Sbjct: 81  PCPMCAGALLQSRIDRVVFGARDPKAWADRSILEFLQNPGLNHRVEVRDGVLAEACSEVI 140

Query: 142 QDFFKERR 149
           + FF+ERR
Sbjct: 141 RQFFRERR 148


>gi|291526516|emb|CBK92103.1| Cytosine/adenosine deaminases [Eubacterium rectale DSM 17629]
 gi|291527005|emb|CBK92591.1| Cytosine/adenosine deaminases [Eubacterium rectale M104/1]
          Length = 157

 Score = 98.2 bits (243), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 56/149 (37%), Positives = 78/149 (52%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M +   +M  A+++A+ A   +E+P+G V V  +KII+R  NR    K+  AHAE+ AIR
Sbjct: 1   MTQDEKYMKQAIKQAKKAYALDEVPIGCVIVAGDKIIARGYNRRNTDKNPLAHAELSAIR 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              +      L E  +YVTLEPC MCA AI  ARI R+  GA NPK G   +      + 
Sbjct: 61  KASKKTGDWRLEECTMYVTLEPCQMCAGAIVQARIPRVVIGAMNPKAGCAGSIINLLQMQ 120

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  +   GI       ++  FFKE R
Sbjct: 121 QFNHQVQTDIGICGDECSTMLSTFFKELR 149


>gi|300113226|ref|YP_003759801.1| CMP/dCMP deaminase zinc-binding protein [Nitrosococcus watsonii
           C-113]
 gi|299539163|gb|ADJ27480.1| CMP/dCMP deaminase zinc-binding protein [Nitrosococcus watsonii
           C-113]
          Length = 188

 Score = 98.2 bits (243), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 58/143 (40%), Positives = 76/143 (53%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  AL  A+ A    E+PVGAV V  ++I+    N     +D TAHAEI AIR   + L
Sbjct: 46  WMYHALALARYAEETGEVPVGAVVVQEDEIVGEGWNCPINSRDPTAHAEIQAIRAASQQL 105

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L    LYVTLEPC MCA AI  ARIRR+ +GA +PKGG + +          +H  
Sbjct: 106 GNYRLVGTTLYVTLEPCAMCAGAIIQARIRRVVFGAFDPKGGAVGSALSILPGERLNHQV 165

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E   G+  +    I+  FF+ RR
Sbjct: 166 ECQGGVLAEACGAILSAFFRARR 188


>gi|282883358|ref|ZP_06291951.1| tRNA-specific adenosine deaminase [Peptoniphilus lacrimalis 315-B]
 gi|281296769|gb|EFA89272.1| tRNA-specific adenosine deaminase [Peptoniphilus lacrimalis 315-B]
          Length = 157

 Score = 98.2 bits (243), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 53/143 (37%), Positives = 81/143 (56%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  ALE A+ +    ++PVG V V + KII +  N+  + K+   HAEI AI   C+ L
Sbjct: 11  FMKKALELAKISYENFDVPVGCVIVKDKKIIGKGYNQKEKNKNPLCHAEINAINSACKNL 70

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
           +   L + D+YVTLEPC MC  AI  ARI+ LY+GA N + G + +  +       +H  
Sbjct: 71  NSYHLEDCDMYVTLEPCLMCVGAIINARIKNLYFGAYNYRFGAVLSHVELLKDGGFNHKT 130

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           +   GI ++ S +++  FF++ R
Sbjct: 131 KYQGGILKEESARLLNSFFEKLR 153


>gi|226363496|ref|YP_002781278.1| tRNA-specific adenosine deaminase [Rhodococcus opacus B4]
 gi|226241985|dbj|BAH52333.1| putative tRNA-specific adenosine deaminase [Rhodococcus opacus B4]
          Length = 152

 Score = 98.2 bits (243), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 53/129 (41%), Positives = 73/129 (56%), Gaps = 2/129 (1%)

Query: 23  EIPVGAVAVLNNKI-ISRAGNRNRELKDVTAHAEILAIRMGCRILSQEI-LPEVDLYVTL 80
           ++PVGAV    + + +SRA N    + D TAHAEI+A+R   R+      L    L VTL
Sbjct: 24  DVPVGAVVFDADGVEVSRAVNSREAMADPTAHAEIIALRAAARVYGDGWRLEGATLAVTL 83

Query: 81  EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140
           EPCTMCA A+ LARI R+ +GA  PK G + +           H P++  G+ E     I
Sbjct: 84  EPCTMCAGALVLARISRVVFGAWEPKTGAVGSLWDVVRDRRLTHRPQVRGGVLEDECAGI 143

Query: 141 IQDFFKERR 149
           ++DFF+ERR
Sbjct: 144 LEDFFRERR 152


>gi|288549944|ref|ZP_05968716.2| tRNA-specific adenosine deaminase [Enterobacter cancerogenus ATCC
           35316]
 gi|288317287|gb|EFC56225.1| tRNA-specific adenosine deaminase [Enterobacter cancerogenus ATCC
           35316]
          Length = 168

 Score = 98.2 bits (243), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 55/143 (38%), Positives = 76/143 (53%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  AL  AQ A    E+PVGAV V NN++I    NR     D TAHAEI+A+R G  ++
Sbjct: 11  WMRHALTLAQRAWEEGEVPVGAVLVHNNQVIGEGWNRPIGRHDPTAHAEIMALRQGGLVM 70

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  LYVTLEPC MC+ A+  +RI  L +GA + K G   +          +H  
Sbjct: 71  QNYRLLDTTLYVTLEPCVMCSGAMVHSRIGTLVFGARDEKTGAAGSLMDVLGHPGMNHQV 130

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           +I  G+       ++ DFF+ RR
Sbjct: 131 KIIGGVLAPECSGLLSDFFRMRR 153


>gi|225023945|ref|ZP_03713137.1| hypothetical protein EIKCOROL_00812 [Eikenella corrodens ATCC
           23834]
 gi|224942970|gb|EEG24179.1| hypothetical protein EIKCOROL_00812 [Eikenella corrodens ATCC
           23834]
          Length = 254

 Score = 98.2 bits (243), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 58/143 (40%), Positives = 75/143 (52%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  AL+ A+ A    E+PVGAV V   +II R  N       V  HAEI A+    R L
Sbjct: 110 WMQQALQLAEQALAAGEVPVGAVVVRRGEIIGRGANACVTEHSVCRHAEIAALTEAGRRL 169

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L   DLYVTLEPC+MCA AI  +RIRRL Y A+ PK G   +    +     +   
Sbjct: 170 GNYRLDGCDLYVTLEPCSMCAGAIMQSRIRRLIYAAAEPKTGAAGSMLDLFANKQLNPHT 229

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
            +  G+    S Q++Q FF+ERR
Sbjct: 230 AVQGGVLAAESAQLLQRFFQERR 252


>gi|170755371|ref|YP_001779653.1| cytidine/deoxycytidylate deaminase family protein [Clostridium
           botulinum B1 str. Okra]
 gi|169120583|gb|ACA44419.1| cytidine/deoxycytidylate deaminase family protein [Clostridium
           botulinum B1 str. Okra]
          Length = 145

 Score = 98.2 bits (243), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 58/145 (40%), Positives = 81/145 (55%), Gaps = 1/145 (0%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           N ++  A+ EA+ A    E+PVGA+ V  NKII+++ N    LKD TAHAEILAI+  C 
Sbjct: 2   NDYIEYAIIEAEKALAIGEVPVGAIIVKENKIIAKSHNLKESLKDPTAHAEILAIKEACN 61

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
            +    L    +YVTLEPC MCA+AI  +RI  L+ G  +P GG   +       +   +
Sbjct: 62  TIHNWRLKGCKMYVTLEPCAMCASAIIQSRISELHIGTFDPVGGACGSVVNITNNSYLKN 121

Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149
           +  I     ++ SR II +FFK  R
Sbjct: 122 NLNIKWLYDDECSR-IITNFFKNIR 145


>gi|237800069|ref|ZP_04588530.1| cytidine/deoxycytidylate deaminase, zinc-binding region
           [Pseudomonas syringae pv. oryzae str. 1_6]
 gi|237806398|ref|ZP_04593102.1| cytidine/deoxycytidylate deaminase, zinc-binding region
           [Pseudomonas syringae pv. oryzae str. 1_6]
 gi|331022924|gb|EGI02981.1| cytidine/deoxycytidylate deaminase, zinc-binding region
           [Pseudomonas syringae pv. oryzae str. 1_6]
 gi|331027511|gb|EGI07566.1| cytidine/deoxycytidylate deaminase, zinc-binding region
           [Pseudomonas syringae pv. oryzae str. 1_6]
          Length = 168

 Score = 98.2 bits (243), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 52/127 (40%), Positives = 74/127 (58%)

Query: 23  EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEP 82
           E+PVGAV V N +II R  N      D +AHAE++AIR   + L    LP   LYVTLEP
Sbjct: 31  EVPVGAVVVHNGEIIGRGYNCPISGSDPSAHAEMVAIRESAKALDNYRLPGSTLYVTLEP 90

Query: 83  CTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQ 142
           C+MCA  I  +R+ R+ YGA  PK G +++  QF++ A  +H      G+  +    ++ 
Sbjct: 91  CSMCAGLIVHSRVARVVYGALEPKAGIVQSQGQFFSQAFLNHRVLFEGGVLGEECGAMLS 150

Query: 143 DFFKERR 149
           +FF+ RR
Sbjct: 151 EFFRMRR 157


>gi|330807694|ref|YP_004352156.1| deaminase [Pseudomonas brassicacearum subsp. brassicacearum NFM421]
 gi|327375802|gb|AEA67152.1| putative deaminase [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
          Length = 165

 Score = 98.2 bits (243), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 52/127 (40%), Positives = 74/127 (58%)

Query: 23  EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEP 82
           E+PVGAV V + +II R  N      D +AHAE++AIR   + +S   LP   LYVTLEP
Sbjct: 34  EVPVGAVLVQDGEIIGRGFNCPISGHDPSAHAEMVAIRAAAQAVSNYRLPGSTLYVTLEP 93

Query: 83  CTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQ 142
           C+MCA  I  +RI R+ YGA  PK G +++  QF++    +H      G+  +    ++ 
Sbjct: 94  CSMCAGLIVHSRIARVVYGALEPKAGIVQSQGQFFSQGFLNHRVMYEGGVLAEECSTVLS 153

Query: 143 DFFKERR 149
           +FFK RR
Sbjct: 154 EFFKARR 160


>gi|148378037|ref|YP_001252578.1| cytidine/deoxycytidylate deaminase family protein [Clostridium
           botulinum A str. ATCC 3502]
 gi|153931005|ref|YP_001382436.1| cytidine/deoxycytidylate deaminase family protein [Clostridium
           botulinum A str. ATCC 19397]
 gi|153937691|ref|YP_001385989.1| cytidine/deoxycytidylate deaminase family protein [Clostridium
           botulinum A str. Hall]
 gi|153941479|ref|YP_001389392.1| cytidine/deoxycytidylate deaminase family protein [Clostridium
           botulinum F str. Langeland]
 gi|168181142|ref|ZP_02615806.1| cytidine/deoxycytidylate deaminase family protein [Clostridium
           botulinum NCTC 2916]
 gi|226947243|ref|YP_002802334.1| cytidine/deoxycytidylate deaminase family protein [Clostridium
           botulinum A2 str. Kyoto]
 gi|148287521|emb|CAL81583.1| putative cytosine deaminase [Clostridium botulinum A str. ATCC
           3502]
 gi|152927049|gb|ABS32549.1| cytidine/deoxycytidylate deaminase family protein [Clostridium
           botulinum A str. ATCC 19397]
 gi|152933605|gb|ABS39104.1| cytidine/deoxycytidylate deaminase family protein [Clostridium
           botulinum A str. Hall]
 gi|152937375|gb|ABS42873.1| cytidine/deoxycytidylate deaminase family protein [Clostridium
           botulinum F str. Langeland]
 gi|182668031|gb|EDT80010.1| cytidine/deoxycytidylate deaminase family protein [Clostridium
           botulinum NCTC 2916]
 gi|226841341|gb|ACO84007.1| cytidine/deoxycytidylate deaminase family protein [Clostridium
           botulinum A2 str. Kyoto]
 gi|295317500|gb|ADF97877.1| cytidine/deoxycytidylate deaminase family protein [Clostridium
           botulinum F str. 230613]
 gi|322804299|emb|CBZ01849.1| tRNA-specific adenosine-34 deaminase [Clostridium botulinum H04402
           065]
          Length = 145

 Score = 98.2 bits (243), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 58/145 (40%), Positives = 81/145 (55%), Gaps = 1/145 (0%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           N ++  A+ EA+ A    E+PVGA+ V  NKII+++ N    LKD TAHAEILAI+  C 
Sbjct: 2   NDYIEYAIIEAKKALAIGEVPVGAIIVKENKIIAKSHNLKESLKDPTAHAEILAIKEACN 61

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
            +    L    +YVTLEPC MCA+AI  +RI  L+ G  +P GG   +       +   +
Sbjct: 62  TIHNWRLKGCKMYVTLEPCAMCASAIIQSRISELHIGTFDPVGGACGSVVNITNNSYLKN 121

Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149
           +  I     ++ SR II +FFK  R
Sbjct: 122 NLNIKWLYDDECSR-IITNFFKNIR 145


>gi|313677068|ref|YP_004055064.1| cmp/dcmp deaminase zinc-binding protein [Marivirga tractuosa DSM
           4126]
 gi|312943766|gb|ADR22956.1| CMP/dCMP deaminase zinc-binding protein [Marivirga tractuosa DSM
           4126]
          Length = 152

 Score = 98.2 bits (243), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 55/143 (38%), Positives = 79/143 (55%), Gaps = 5/143 (3%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  AL +A+ A    EIPVGAV V   KII++A N+   L DVTAHAE+LAI      L
Sbjct: 11  FMREALRQAEIAYEEGEIPVGAVVVCQKKIIAKAYNQTERLNDVTAHAEMLAITSAANHL 70

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
             + L +  LYV+LEPC MCA A++ ++I  + Y  ++ K G  +           H   
Sbjct: 71  GGKYLTDCTLYVSLEPCGMCAGALNWSQISEIVYALADEKRGFTKINPNM-----IHPKT 125

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           ++  G+    S+++I DFF + R
Sbjct: 126 KVKSGLMAAESKKLIDDFFAKMR 148


>gi|110833682|ref|YP_692541.1| cytidine/deoxycytidylate deaminase family protein [Alcanivorax
           borkumensis SK2]
 gi|110646793|emb|CAL16269.1| cytidine/deoxycytidylate deaminase family protein [Alcanivorax
           borkumensis SK2]
          Length = 152

 Score = 98.2 bits (243), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 55/143 (38%), Positives = 81/143 (56%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  AL  A+ AA + E+PVGA+ V   +++ +  N+     D +AHAEI+A+R      
Sbjct: 6   WMQQALMLARQAADQGEVPVGALVVRGGQLLGQGYNQPITANDPSAHAEIIAMRSASLAE 65

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L    LYVTLEPCTMC  A+  ARI RL YGAS P+ G  E+  Q  ++   +H  
Sbjct: 66  KNYRLSGCTLYVTLEPCTMCFGAMVHARIGRLVYGASEPRAGVCESQLQLPSVDFYNHRV 125

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+  G+  + S  +++ FF +RR
Sbjct: 126 EVEKGVLAEESAMLLKRFFADRR 148


>gi|331092011|ref|ZP_08340842.1| hypothetical protein HMPREF9477_01485 [Lachnospiraceae bacterium
           2_1_46FAA]
 gi|330402212|gb|EGG81783.1| hypothetical protein HMPREF9477_01485 [Lachnospiraceae bacterium
           2_1_46FAA]
          Length = 155

 Score = 97.8 bits (242), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 51/149 (34%), Positives = 84/149 (56%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M +   +M  A+++A+ A   NE+P+G V V  +KIISR  NR    K+  AHAE++AI+
Sbjct: 1   MNQDEKYMREAIKQAKKAYEINEVPIGCVIVCEDKIISRGYNRRTTDKNPLAHAEMIAIK 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              + +    L +  +YVTLEPC MC+ AI  +R++++  G  N K G   +      + 
Sbjct: 61  KASKKVGDWRLEDCTMYVTLEPCQMCSGAIVQSRMKKVVVGCMNAKAGCAGSILNLLQMD 120

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  E+  G+ E+    ++++FFKE R
Sbjct: 121 EFNHQVELETGVLEEECSLLMKNFFKELR 149


>gi|91225086|ref|ZP_01260308.1| YfhC protein [Vibrio alginolyticus 12G01]
 gi|91190029|gb|EAS76300.1| YfhC protein [Vibrio alginolyticus 12G01]
          Length = 169

 Score = 97.8 bits (242), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 54/142 (38%), Positives = 76/142 (53%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  A+E A+ A    E+PVGAV V + +II+   NR+    D TAHAEI  +R   + L 
Sbjct: 1   MRRAMELAEQAEAEGEVPVGAVLVKDGEIIAEGRNRSIGTHDATAHAEIQTLRKAGQKLE 60

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
              L +  LYVTLEPC MCA A+  +R++R+ +GA + K G        +     +H   
Sbjct: 61  NYRLLDTTLYVTLEPCPMCAGALLHSRVKRVVFGAPDLKAGAAGTVLNLFESQAAYHYAL 120

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
           +  G+ E   R  +Q FFK RR
Sbjct: 121 VEKGLLEDECRTQLQAFFKRRR 142


>gi|262395051|ref|YP_003286905.1| tRNA-specific adenosine-34 deaminase [Vibrio sp. Ex25]
 gi|262338645|gb|ACY52440.1| tRNA-specific adenosine-34 deaminase [Vibrio sp. Ex25]
          Length = 182

 Score = 97.8 bits (242), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 53/144 (36%), Positives = 77/144 (53%)

Query: 6   VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           +FM  A+  A+ A    E+PVGAV V + +II+   NR+    D TAHAEI  +R   + 
Sbjct: 12  LFMRRAMVLAEQAEAEGEVPVGAVLVKDGEIIAEGWNRSIGTNDATAHAEIQTLRKAGQK 71

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           +    L +  LYVTLEPC MCA A+  +R++R+ +GA + K G        +     +H 
Sbjct: 72  IENYRLLDTTLYVTLEPCPMCAGALLHSRVKRVVFGAPDLKAGAAGTVLNLFESQAAYHY 131

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
             +  G+ E   R  +Q FFK RR
Sbjct: 132 ALVEKGLLEDECRTQLQAFFKRRR 155


>gi|195977341|ref|YP_002122585.1| tRNA-specific adenosine-34 deaminase [Streptococcus equi subsp.
           zooepidemicus MGCS10565]
 gi|195974046|gb|ACG61572.1| tRNA-specific adenosine-34 deaminase [Streptococcus equi subsp.
           zooepidemicus MGCS10565]
          Length = 164

 Score = 97.8 bits (242), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 55/143 (38%), Positives = 78/143 (54%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  AL+EA+ + L++EIP+G V V    II R  N   E      HAEI+AI       
Sbjct: 11  FMREALKEAKKSLLKDEIPIGCVIVKAGHIIGRGHNAREERNQAIMHAEIMAISEANVHE 70

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  L+VT+EPC MC+ AI LARI  + YGASN K GG  +  Q  T    +H  
Sbjct: 71  GNWRLLDTTLFVTIEPCVMCSGAIGLARIPHVVYGASNQKFGGAGSLYQILTDERLNHRV 130

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           ++  G+      +++Q FF+++R
Sbjct: 131 QLETGLLADDCAKLMQTFFQQKR 153


>gi|300813981|ref|ZP_07094274.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Peptoniphilus sp. oral taxon 836 str. F0141]
 gi|300511875|gb|EFK39082.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Peptoniphilus sp. oral taxon 836 str. F0141]
          Length = 157

 Score = 97.8 bits (242), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 53/143 (37%), Positives = 80/143 (55%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  ALE A+ +    ++PVG V V + KII +  N+  + K+   HAEI AI   C+ L
Sbjct: 11  FMKKALELAKISYKNFDVPVGCVIVKDKKIIGQGYNQKEKKKNPLCHAEINAINSACKNL 70

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
           +   L + D+YVTLEPC MC  AI  ARI+ LY+GA N + G + +  +       +H  
Sbjct: 71  NSYHLEDCDMYVTLEPCLMCVGAIINARIKNLYFGAYNYRFGAVLSHVELLKDGGFNHKT 130

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
               GI ++ S +++  FF++ R
Sbjct: 131 NYQGGILKEESARLLNSFFEKLR 153


>gi|224824536|ref|ZP_03697643.1| CMP/dCMP deaminase zinc-binding [Lutiella nitroferrum 2002]
 gi|224603029|gb|EEG09205.1| CMP/dCMP deaminase zinc-binding [Lutiella nitroferrum 2002]
          Length = 242

 Score = 97.8 bits (242), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 55/143 (38%), Positives = 80/143 (55%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM+ A+  A+ AA   E+PVGAV V   +II R  NR     D +AHAE++A+R     L
Sbjct: 97  FMAEAIRLAKAAAAEGEVPVGAVVVKEGRIIGRGFNRPVTSHDPSAHAEMVALREAAATL 156

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L   DLYVTLEPC MC  AI  +R+ R+ YGA +PK G   +    +     +H  
Sbjct: 157 GNYRLSGCDLYVTLEPCPMCGGAILHSRLDRVIYGARDPKIGAAGSVLNLFGERALNHQT 216

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
            ++ GI  +   +++ +FF++RR
Sbjct: 217 ALFSGIEAEACGRLLSEFFRQRR 239


>gi|313673213|ref|YP_004051324.1| cmp/dcmp deaminase zinc-binding protein [Calditerrivibrio
           nitroreducens DSM 19672]
 gi|312939969|gb|ADR19161.1| CMP/dCMP deaminase zinc-binding protein [Calditerrivibrio
           nitroreducens DSM 19672]
          Length = 154

 Score = 97.8 bits (242), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 51/144 (35%), Positives = 84/144 (58%)

Query: 6   VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           +FM   ++ A+ A   +++P+GA+ V++ KII+   NR +  K+   HAEI+A++   R 
Sbjct: 7   LFMKKTIQVAKRALKYDDVPIGAIVVMDGKIIASGYNRKKTTKNPLDHAEIIAMKKAARK 66

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           +    L    LY TLEPC MCA AI   RI+R+ +G   PK GG+ +  + + + T +H 
Sbjct: 67  IGDWRLNNCVLYSTLEPCIMCAGAILHYRIKRVVFGTLEPKFGGVVSNDRIFDIKTLNHR 126

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
            E   G  E+  + +++DFFK+ R
Sbjct: 127 VEYEFGFFEEEIKGMMRDFFKKVR 150


>gi|307132102|ref|YP_003884118.1| tRNA-specific adenosine-34 deaminase [Dickeya dadantii 3937]
 gi|306529631|gb|ADM99561.1| tRNA-specific adenosine-34 deaminase [Dickeya dadantii 3937]
          Length = 167

 Score = 97.8 bits (242), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 56/143 (39%), Positives = 76/143 (53%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  AL  AQ A    E+PVGAV V  +KII    NR     D TAHAEI+A++ G + L
Sbjct: 10  WMRHALTLAQRAWDAGEVPVGAVLVRGDKIIGEGWNRPISRNDPTAHAEIMALQQGGQAL 69

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  LY+TLEPC MCA A+  +RI RL YGA++ K G   +          +H  
Sbjct: 70  QNYRLLDTTLYITLEPCVMCAGAMIHSRINRLVYGAADAKTGAAGSLVDILRHPGMNHHI 129

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
            I  G+      +++  FF+ RR
Sbjct: 130 VITDGVLADECSELLSRFFRMRR 152


>gi|68304978|gb|AAY89989.1| unknown [uncultured bacterium BAC13K9BAC]
          Length = 157

 Score = 97.8 bits (242), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 51/147 (34%), Positives = 83/147 (56%), Gaps = 2/147 (1%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNN--KIISRAGNRNRELKDVTAHAEILAIRMG 62
           ++F   A   A  A  ++E+PVGAV + ++  ++IS   N+ ++ +    HAE+LA++  
Sbjct: 6   HLFYELAYNLALVAYNQDEVPVGAVIIKDSTFEVISSGYNKMKQNRSSIDHAEMLALKTA 65

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
              L+ E L    +  TLEPC MCA AIS AR+  + + A + K GG+ NG   Y  ++C
Sbjct: 66  MTRLNNERLKGCSMITTLEPCPMCAQAISFARLSSIIFSAEDKKSGGVINGPVIYNSSSC 125

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           HH P I       RS ++++ FF+ +R
Sbjct: 126 HHKPSIIRFNDNGRSTKLLKKFFQNKR 152


>gi|258545205|ref|ZP_05705439.1| tRNA-specific adenosine deaminase [Cardiobacterium hominis ATCC
           15826]
 gi|258519557|gb|EEV88416.1| tRNA-specific adenosine deaminase [Cardiobacterium hominis ATCC
           15826]
          Length = 151

 Score = 97.8 bits (242), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 58/132 (43%), Positives = 78/132 (59%), Gaps = 7/132 (5%)

Query: 22  NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81
            E+P+GA+ V N +II+ A NR     D TAHAEILA+R G + L    +  V LYVTLE
Sbjct: 21  GEVPIGAILVANGEIIASAHNRTVSDHDPTAHAEILALRAGGQALGNHRMRGVSLYVTLE 80

Query: 82  PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC----HHSPEIYPGISEQRS 137
           PC MC  A+  ARI RL +GA + + G    G+ F  LA      HH  EI  G+ E+  
Sbjct: 81  PCIMCTGALIQARIDRLVFGAYDSRIGAC--GSAF-DLARHRRLNHHIHEIKGGVLEEAC 137

Query: 138 RQIIQDFFKERR 149
           R+ +Q FF+++R
Sbjct: 138 REQLQRFFQQKR 149


>gi|254521455|ref|ZP_05133510.1| tRNA-specific adenosine deaminase [Stenotrophomonas sp. SKA14]
 gi|219719046|gb|EED37571.1| tRNA-specific adenosine deaminase [Stenotrophomonas sp. SKA14]
          Length = 174

 Score = 97.8 bits (242), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 58/145 (40%), Positives = 84/145 (57%), Gaps = 2/145 (1%)

Query: 7   FMSCALEEAQNAALR-NEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           +M  AL  A+ A    +EIPVGAV V  + +++    N N    D +AHAEI+A+R+G +
Sbjct: 16  WMRHALALAERAQREFDEIPVGAVLVGADGQLLGEGWNLNIASHDPSAHAEIVAMRVGGK 75

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
           +LS   L    LYVTLEPC MCA AI  AR+ RL YGAS+PK G   +       A  +H
Sbjct: 76  VLSNHRLLGSTLYVTLEPCAMCAMAIVHARVSRLVYGASDPKTGACGSVFDLLGDARHNH 135

Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149
             EI+ G+  + +   + ++F+ +R
Sbjct: 136 RVEIHGGVLAKEASTRLTNYFRAKR 160


>gi|188533151|ref|YP_001906948.1| tRNA-specific adenosine deaminase [Erwinia tasmaniensis Et1/99]
 gi|188028193|emb|CAO96051.1| tRNA-specific adenosine deaminase [Erwinia tasmaniensis Et1/99]
          Length = 186

 Score = 97.8 bits (242), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 52/143 (36%), Positives = 78/143 (54%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  AL+ A+ A    E+PVGAV VL+ ++I    NR     D TAHAE++A+R G +++
Sbjct: 29  WMRHALQLARRAWNEGEVPVGAVLVLDGQVIGEGWNRPIGHHDPTAHAEMMALRQGGKVI 88

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  LYVTLEPC MCA A+   R+ RL YGA + K G   +          +H  
Sbjct: 89  ENYRLMDTTLYVTLEPCVMCAGAMVHGRVGRLVYGARDAKTGAAGSLLDVLGHPGMNHRV 148

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
            +  G+       ++ +FF++RR
Sbjct: 149 RVDCGVLADECAAMLSEFFRQRR 171


>gi|91776192|ref|YP_545948.1| tRNA-adenosine deaminase [Methylobacillus flagellatus KT]
 gi|91710179|gb|ABE50107.1| tRNA-adenosine deaminase [Methylobacillus flagellatus KT]
          Length = 168

 Score = 97.8 bits (242), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 59/143 (41%), Positives = 72/143 (50%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  AL+ AQ AAL  E+PVGAV V +  +I R  N      D +AHAEI A+R     L
Sbjct: 15  FMRIALQLAQEAALAGEVPVGAVVVKDGVVIGRGSNAPIAYHDPSAHAEIRAMRDAAARL 74

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L    LYVTLEPC MCA AI  ARI RL +GA + K G   +          +H  
Sbjct: 75  GNYRLTGCALYVTLEPCAMCAGAIQHARIARLVFGAHDYKTGACGSVIDLMAEERLNHHT 134

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
            +  G+  Q     +  FF ERR
Sbjct: 135 LVKSGVLVQECSATLTQFFAERR 157


>gi|326624390|gb|EGE30735.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp.
           enterica serovar Dublin str. 3246]
          Length = 161

 Score = 97.8 bits (242), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 55/142 (38%), Positives = 76/142 (53%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  AL  A+ A    E+PVGAV V N+++I    NR     D TAHAEI+A+R G  +L 
Sbjct: 1   MRHALTLAKRAWDEREVPVGAVLVHNHRVIGEGWNRPIGRHDPTAHAEIMALRQGGLVLQ 60

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
              L +  LYVTLEPC MCA A+  +RI R+ +GA + K G   +          +H  +
Sbjct: 61  NYRLLDTTLYVTLEPCVMCAGAMVHSRIGRVVFGARDAKTGAAGSLIDVLHHPGMNHRVD 120

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
           I  G+       ++ DFF+ RR
Sbjct: 121 IIEGVLRDECATLLSDFFRMRR 142


>gi|284006748|emb|CBA72005.1| tRNA-specific adenosine deaminase [Arsenophonus nasoniae]
          Length = 164

 Score = 97.8 bits (242), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 58/148 (39%), Positives = 78/148 (52%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           KK   +M  A+  A+ A  + EIPVGAV V  +K+I+   N+     D  AHAEI+A+R 
Sbjct: 5   KKDVYWMRKAILLAEKAQAKGEIPVGAVLVHEDKLIAEGWNQPISDHDPCAHAEIIALRA 64

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
           G + L    L    LYVTLEPC MCA A+  ARI RL YGA + K G   +    +    
Sbjct: 65  GGQYLQNYRLLNTTLYVTLEPCIMCAGAMIHARISRLVYGACDQKTGAAGSIIDVFNHPD 124

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H   +  GI       ++  FFK+RR
Sbjct: 125 MNHRILVLGGILSDECSAMLSRFFKQRR 152


>gi|262375359|ref|ZP_06068592.1| conserved hypothetical protein [Acinetobacter lwoffii SH145]
 gi|262309613|gb|EEY90743.1| conserved hypothetical protein [Acinetobacter lwoffii SH145]
          Length = 171

 Score = 97.8 bits (242), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 57/144 (39%), Positives = 81/144 (56%), Gaps = 1/144 (0%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  A E+A  AA + EIPVGA+ V  N+II +  N    L D TAHAEI+A+R  C+ +
Sbjct: 11  WMQRAYEQAALAAAQGEIPVGAIIVSQNQIIGQGFNAPISLNDPTAHAEIVALRDACQNI 70

Query: 67  SQEILPE-VDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
               LP+   LYVTLEPCTMC  A+  +R+ R+ +GA   K G + +  Q +     +H 
Sbjct: 71  QNYRLPDDAVLYVTLEPCTMCVGALVHSRVSRVVFGAFEAKAGSLVSARQLFETGYYNHV 130

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
                G  +Q+  + +  FFK RR
Sbjct: 131 FPFQAGCMQQQCSEQLSAFFKLRR 154


>gi|293376812|ref|ZP_06623032.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Turicibacter sanguinis PC909]
 gi|325845379|ref|ZP_08168678.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Turicibacter sp. HGF1]
 gi|292644564|gb|EFF62654.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Turicibacter sanguinis PC909]
 gi|325488594|gb|EGC91004.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Turicibacter sp. HGF1]
          Length = 162

 Score = 97.8 bits (242), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 53/144 (36%), Positives = 79/144 (54%)

Query: 6   VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
            +M  A+EEA+ A    E+P+GAV V + +II+R  N     +   AHAE++AI     +
Sbjct: 5   TYMQAAIEEAKKAQNLGEVPIGAVIVKDGEIIARGYNLRETSQLSNAHAEMIAIAKANEM 64

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           +    L +  LYVTLEPC MCA AI  +RI  + +GA +PKGG           +  +H 
Sbjct: 65  VGSWRLEDCTLYVTLEPCPMCAGAIVQSRIPTVVFGAHDPKGGCCGTIYNLLDESKFNHR 124

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
            E+  G+ E+   Q++ DFF+  R
Sbjct: 125 CELVSGVLEEECGQLLSDFFRNLR 148


>gi|268593242|ref|ZP_06127463.1| tRNA-specific adenosine deaminase [Providencia rettgeri DSM 1131]
 gi|291311137|gb|EFE51590.1| tRNA-specific adenosine deaminase [Providencia rettgeri DSM 1131]
          Length = 160

 Score = 97.8 bits (242), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 56/143 (39%), Positives = 81/143 (56%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  A+E A  A    EIPVGAV V +N +++   NR+    + TAHAEI+A++   + L
Sbjct: 10  WMQQAIELALKAQDLGEIPVGAVLVKDNHLVASGWNRSIIDHNPTAHAEIMALQQAGQEL 69

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
           S   L +  LYVTLEPC MCA A+  +RI R+ YGA + K G   +       A  +H  
Sbjct: 70  SNYRLLDTTLYVTLEPCIMCAGAMIHSRISRVVYGAKDFKTGACGSYLDIMGQAGLNHYV 129

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           ++  G+ EQ+   ++  FFK RR
Sbjct: 130 DVTGGVLEQQCSSMLSAFFKLRR 152


>gi|294669183|ref|ZP_06734263.1| tRNA-specific adenosine deaminase [Neisseria elongata subsp.
           glycolytica ATCC 29315]
 gi|291308815|gb|EFE50058.1| tRNA-specific adenosine deaminase [Neisseria elongata subsp.
           glycolytica ATCC 29315]
          Length = 246

 Score = 97.8 bits (242), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 53/143 (37%), Positives = 82/143 (57%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  AL +A+ AA   E+PVGAV V N +++S A NR     D+ +HAE+ A+    R  
Sbjct: 95  FMQLALHQAEAAAAAGEVPVGAVVVRNGEVLSTAHNRCVADCDIGSHAELRALAEAGRQT 154

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L   D+Y+TLEPC MCA+A+  AR+ R+ YGA+ PK G   +    ++    +   
Sbjct: 155 GSYRLDGCDVYITLEPCAMCASALIQARVARVVYGAAEPKSGAAGSVVDLFSDGRLNKHT 214

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
            ++ GI  +  + ++Q FF++RR
Sbjct: 215 AVFGGILAEDCQAVLQHFFRQRR 237


>gi|205371946|ref|ZP_03224765.1| hypothetical protein Bcoam_00240 [Bacillus coahuilensis m4-4]
          Length = 160

 Score = 97.8 bits (242), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 52/143 (36%), Positives = 78/143 (54%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  A+EEA  A    E+P+GAV V + ++I+   N     ++   HAE++AI+  C  L
Sbjct: 6   FMKLAIEEALKAKEILEVPIGAVIVKDGEVIATGHNLRETTQNAITHAEVIAIQKACEKL 65

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L   +LYVTLEPC MC+ AI  +RI ++ YGA +PK G   +       +  +H  
Sbjct: 66  GTWRLEGAELYVTLEPCPMCSGAIVQSRIEKVIYGAKDPKAGCAGSLMNLLQDSRFNHQC 125

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+  GI E    +++  FF+E R
Sbjct: 126 EVEHGILEVECGELLSSFFRELR 148


>gi|168184980|ref|ZP_02619644.1| cytidine/deoxycytidylate deaminase family protein [Clostridium
           botulinum Bf]
 gi|237793341|ref|YP_002860893.1| cytidine/deoxycytidylate deaminase family protein [Clostridium
           botulinum Ba4 str. 657]
 gi|182671972|gb|EDT83933.1| cytidine/deoxycytidylate deaminase family protein [Clostridium
           botulinum Bf]
 gi|229261589|gb|ACQ52622.1| cytidine/deoxycytidylate deaminase family protein [Clostridium
           botulinum Ba4 str. 657]
          Length = 148

 Score = 97.8 bits (242), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 59/148 (39%), Positives = 81/148 (54%), Gaps = 7/148 (4%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           N ++  A+ EA+ A    E+PVGA+ V  NKII+++ N    LKD TAHAEILAI+  C 
Sbjct: 2   NDYIEYAIIEAKKALAIGEVPVGAIIVKENKIIAKSHNLKESLKDPTAHAEILAIKEACN 61

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG---IENGTQFYTLAT 121
            +    L    +YVTLEPC MCA+AI  +RI  L+ G  +P GG    + N T    L +
Sbjct: 62  TIHNWRLKGCKMYVTLEPCAMCASAIIQSRISELHIGTFDPVGGACGSVVNITNNSYLKS 121

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
                 +Y    +    +II +FFK  R
Sbjct: 122 NLSIKWLY----DDECSKIITNFFKNIR 145


>gi|318606786|emb|CBY28284.1| tRNA-specific adenosine-34 deaminase [Yersinia enterocolitica
           subsp. palearctica Y11]
          Length = 183

 Score = 97.8 bits (242), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 52/127 (40%), Positives = 72/127 (56%)

Query: 23  EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEP 82
           E+PVGA+ VL+N++I    NR     D TAHAEI+A+R G +++    L +  LYVTLEP
Sbjct: 38  EVPVGAILVLDNQVIGEGWNRPIRDNDPTAHAEIMALRQGGQVVQNYRLIDATLYVTLEP 97

Query: 83  CTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQ 142
           C MCA A+  +RIRRL YGA++ K G   +          +H  EI  G+        + 
Sbjct: 98  CVMCAGAMVHSRIRRLVYGANDLKTGAAGSLVDILRHPGMNHQIEITAGVMADVCAHQLS 157

Query: 143 DFFKERR 149
            FF+ RR
Sbjct: 158 AFFRVRR 164


>gi|258405729|ref|YP_003198471.1| CMP/dCMP deaminase zinc-binding [Desulfohalobium retbaense DSM
           5692]
 gi|257797956|gb|ACV68893.1| CMP/dCMP deaminase zinc-binding protein [Desulfohalobium retbaense
           DSM 5692]
          Length = 165

 Score = 97.8 bits (242), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 56/144 (38%), Positives = 82/144 (56%), Gaps = 2/144 (1%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNK-IISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  AL+EA+ A    E+P+GAV V  +K +++R GNR     D TAHAEI+A+R  C+ +
Sbjct: 19  MELALDEARAAQTHGEVPIGAVLVDPDKRVLARGGNRTITDSDPTAHAEIVALRRACQSV 78

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               LP   L VTLEPC MC  A+  AR+  + + A +PK G I +  +   L   +H  
Sbjct: 79  GNYRLPGAILAVTLEPCLMCLGALIQARLAGVVFAARDPKAGAIVSQLEGPHLPWLNHRF 138

Query: 127 EIYPGISE-QRSRQIIQDFFKERR 149
            +    +    SR ++QDFF++RR
Sbjct: 139 WVRETTAHAATSRALLQDFFRQRR 162


>gi|116333248|ref|YP_794775.1| cytosine/adenosine deaminase [Lactobacillus brevis ATCC 367]
 gi|116098595|gb|ABJ63744.1| tRNA-adenosine deaminase [Lactobacillus brevis ATCC 367]
          Length = 183

 Score = 97.4 bits (241), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 52/139 (37%), Positives = 79/139 (56%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  AL EA+ AA+  E+P+G+V V + +II R  N      D T HAEI AI   C  L
Sbjct: 13  YMEEALFEAEQAAVIGEVPIGSVIVHDGQIIGRGHNLREHGHDATLHAEIRAIEEACATL 72

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  LYVT+EPC MC+ AI  ARI  ++YGA +PK G +++     T +  +H+ 
Sbjct: 73  QSWRLNDCQLYVTIEPCLMCSGAIINARIPEVFYGARDPKAGAVDSLYATLTDSRLNHTV 132

Query: 127 EIYPGISEQRSRQIIQDFF 145
            ++ G+  + + + +  FF
Sbjct: 133 AVHEGLLAKDAGERMVAFF 151


>gi|15598962|ref|NP_252456.1| hypothetical protein PA3767 [Pseudomonas aeruginosa PAO1]
 gi|116051766|ref|YP_789395.1| hypothetical protein PA14_15680 [Pseudomonas aeruginosa UCBPP-PA14]
 gi|218889954|ref|YP_002438818.1| putative Cytosine/adenosine deaminase [Pseudomonas aeruginosa
           LESB58]
 gi|254236673|ref|ZP_04929996.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719]
 gi|254242457|ref|ZP_04935779.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192]
 gi|296387724|ref|ZP_06877199.1| putative Cytosine/adenosine deaminase [Pseudomonas aeruginosa PAb1]
 gi|313109181|ref|ZP_07795150.1| putative Cytosine/adenosine deaminase [Pseudomonas aeruginosa
           39016]
 gi|9949937|gb|AAG07154.1|AE004795_6 conserved hypothetical protein [Pseudomonas aeruginosa PAO1]
 gi|115586987|gb|ABJ13002.1| putative Cytosine/adenosine deaminase [Pseudomonas aeruginosa
           UCBPP-PA14]
 gi|126168604|gb|EAZ54115.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719]
 gi|126195835|gb|EAZ59898.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192]
 gi|218770177|emb|CAW25939.1| putative Cytosine/adenosine deaminase [Pseudomonas aeruginosa
           LESB58]
 gi|310881652|gb|EFQ40246.1| putative Cytosine/adenosine deaminase [Pseudomonas aeruginosa
           39016]
          Length = 182

 Score = 97.4 bits (241), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 52/126 (41%), Positives = 70/126 (55%)

Query: 24  IPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83
           +PVGAV V   +II R  NR     D +AHAE+LAIRM         LP   LYVTLEPC
Sbjct: 48  VPVGAVLVREGEIIGRGFNRPISSHDPSAHAEMLAIRMAAAEAGNYRLPGSTLYVTLEPC 107

Query: 84  TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQD 143
           +MC+  +  ARI+RL YG   PK G +E+  +F+     +H   +  G+  +   Q +  
Sbjct: 108 SMCSGLLVHARIQRLVYGTVEPKSGAVESRGRFFEQEHLNHRVMVEGGVLAEECSQALSA 167

Query: 144 FFKERR 149
           FF+ RR
Sbjct: 168 FFRARR 173


>gi|224541628|ref|ZP_03682167.1| hypothetical protein CATMIT_00799 [Catenibacterium mitsuokai DSM
           15897]
 gi|224525466|gb|EEF94571.1| hypothetical protein CATMIT_00799 [Catenibacterium mitsuokai DSM
           15897]
          Length = 147

 Score = 97.4 bits (241), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 56/147 (38%), Positives = 80/147 (54%), Gaps = 11/147 (7%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M+ AL+EA+ A   +E+P+G + V   +II+R  N+   LK  T HAEILAI      L
Sbjct: 6   YMAEALKEAEIAMSEDEVPIGCIIVYEGQIIARTHNQKETLKKATGHAEILAINQASEYL 65

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG----IENGTQFYTLATC 122
               L    +YVTLEPC MC  AI  +R+ RL  GA+  K  G    IEN          
Sbjct: 66  DLWHLDGCTMYVTLEPCMMCTGAIIQSRMSRLVIGANVSKWPGFIELIENN-------PV 118

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H P++  GI +++   I+ +FFK +R
Sbjct: 119 NHHPDVQQGILKEQCATIVSEFFKRKR 145


>gi|116515096|ref|YP_802725.1| hypothetical protein BCc_160 [Buchnera aphidicola str. Cc (Cinara
           cedri)]
 gi|116256950|gb|ABJ90632.1| tRNA-specific adenosine deaminase [Buchnera aphidicola str. Cc
           (Cinara cedri)]
          Length = 153

 Score = 97.4 bits (241), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 56/146 (38%), Positives = 78/146 (53%), Gaps = 1/146 (0%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           N +M  AL++A       E+P+G++ + NN +IS A N    L D +AHAEIL IR G +
Sbjct: 6   NYWMKYALKQAYLGKKNGEVPIGSLLIKNNNLISSAWNSCINLFDASAHAEILVIRNGGK 65

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF-YTLATCH 123
           IL    L    LYVT EPC MC+ AI  ARI ++ YG+ + K         F Y     H
Sbjct: 66  ILKNYRLKNTILYVTHEPCFMCSEAIINARINKVVYGSYSFKKNCFSYYINFLYINNIKH 125

Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149
           H  EI  GI       ++++FF+ +R
Sbjct: 126 HIKEIKSGILLYECSNLLKNFFRRKR 151


>gi|303245260|ref|ZP_07331544.1| CMP/dCMP deaminase zinc-binding [Desulfovibrio fructosovorans JJ]
 gi|302493109|gb|EFL52971.1| CMP/dCMP deaminase zinc-binding [Desulfovibrio fructosovorans JJ]
          Length = 152

 Score = 97.4 bits (241), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 57/143 (39%), Positives = 81/143 (56%), Gaps = 1/143 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M+ ALE+A+ AA + E PVGAV +    +++  AGN      D TAHAEILA+R     +
Sbjct: 1   MALALEKARGAAAQGEAPVGAVVLSAAGELLGAAGNAPITRHDPTAHAEILALRQAAAHV 60

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               LP   + VTLEPC MC  A+  AR+  L YGAS+P+ G I +      L   +H  
Sbjct: 61  GNYRLPGSIMAVTLEPCVMCLGAMIHARVGLLVYGASDPRTGAIASMLPGPDLPFFNHRF 120

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           ++  G+ E     +++DFF+ERR
Sbjct: 121 DVLSGVLEATCGGLLRDFFRERR 143


>gi|49081784|gb|AAT50292.1| PA3767 [synthetic construct]
          Length = 183

 Score = 97.4 bits (241), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 52/126 (41%), Positives = 70/126 (55%)

Query: 24  IPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83
           +PVGAV V   +II R  NR     D +AHAE+LAIRM         LP   LYVTLEPC
Sbjct: 48  VPVGAVLVREGEIIGRGFNRPISSHDPSAHAEMLAIRMAAAEAGNYRLPGSTLYVTLEPC 107

Query: 84  TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQD 143
           +MC+  +  ARI+RL YG   PK G +E+  +F+     +H   +  G+  +   Q +  
Sbjct: 108 SMCSGLLVHARIQRLVYGTVEPKSGAVESRGRFFEQEHLNHRVMVEGGVLAEECSQALSA 167

Query: 144 FFKERR 149
           FF+ RR
Sbjct: 168 FFRARR 173


>gi|308050412|ref|YP_003913978.1| tRNA-adenosine deaminase [Ferrimonas balearica DSM 9799]
 gi|307632602|gb|ADN76904.1| tRNA-adenosine deaminase [Ferrimonas balearica DSM 9799]
          Length = 170

 Score = 97.4 bits (241), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 54/149 (36%), Positives = 83/149 (55%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M++   +M+ A++ A+ A    E+PVGAV V + ++I+   N++  L D +AHAE+L +R
Sbjct: 1   MEQHQKWMAHAMKLAEQAEALGEVPVGAVLVRDGEVIAEGFNQSITLNDPSAHAEMLCLR 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              + L    L +  LYVTLEPC+MCA A+  ARI  L YGAS+ K G   +        
Sbjct: 61  AAGQALENYRLLDTTLYVTLEPCSMCAGAMVHARIGTLVYGASDAKTGAAGSVMDLVRHP 120

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  E+  G+  +     +  FFK+RR
Sbjct: 121 ALNHQLEVISGVLSEPCATQLSAFFKKRR 149


>gi|257783881|ref|YP_003179098.1| CMP/dCMP deaminase zinc-binding [Atopobium parvulum DSM 20469]
 gi|257472388|gb|ACV50507.1| CMP/dCMP deaminase zinc-binding [Atopobium parvulum DSM 20469]
          Length = 166

 Score = 97.4 bits (241), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 53/143 (37%), Positives = 80/143 (55%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  ALE+A+ AA   E+P+GAV V   ++++ A NR     D +AHAE LA++   + L
Sbjct: 19  YMKLALEQAELAAQIGEVPIGAVVVCGGEVVAVAHNRREIDNDPSAHAEFLAMQKASKKL 78

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
            +  L    +YVTLEPC MCA  +  ARI R  +GA +PKGG         + +  +H  
Sbjct: 79  GRWRLSGCTVYVTLEPCLMCAGLMVNARIDRCVFGAFDPKGGATGTLFDVSSDSRLNHEF 138

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
            +  G+  + +   ++ FFKERR
Sbjct: 139 AVLGGVLAEEASAQLKAFFKERR 161


>gi|193215821|ref|YP_001997020.1| CMP/dCMP deaminase [Chloroherpeton thalassium ATCC 35110]
 gi|193089298|gb|ACF14573.1| CMP/dCMP deaminase zinc-binding [Chloroherpeton thalassium ATCC
           35110]
          Length = 161

 Score = 97.4 bits (241), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 52/144 (36%), Positives = 80/144 (55%), Gaps = 1/144 (0%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNN-KIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
            M  A  EA+ A  +NE+PVGAV   +N  I+ R  N+   L D TAHAE++A+      
Sbjct: 11  LMEMAFREAEKAFEKNEVPVGAVVFDSNGAIVGRGFNQVEMLCDTTAHAEMIALTSAMNT 70

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           L  + L +  L VT+EPC MCA A+  A++ RL +G+ + K G         T    +H 
Sbjct: 71  LGDKYLTDCTLAVTMEPCPMCAGAMVNAKLGRLIFGSYDAKMGAAGTVFNLTTSKFLNHQ 130

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
            E+  GI E+++ +I++ FF ++R
Sbjct: 131 MEVIGGILEEKTTEILKSFFAQKR 154


>gi|332162680|ref|YP_004299257.1| tRNA-specific adenosine deaminase [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|325666910|gb|ADZ43554.1| tRNA-specific adenosine deaminase [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|330860305|emb|CBX70619.1| tRNA-specific adenosine deaminase [Yersinia enterocolitica W22703]
          Length = 196

 Score = 97.4 bits (241), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 52/127 (40%), Positives = 72/127 (56%)

Query: 23  EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEP 82
           E+PVGA+ VL+N++I    NR     D TAHAEI+A+R G +++    L +  LYVTLEP
Sbjct: 51  EVPVGAILVLDNQVIGEGWNRPIRDNDPTAHAEIMALRQGGQVVQNYRLIDATLYVTLEP 110

Query: 83  CTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQ 142
           C MCA A+  +RIRRL YGA++ K G   +          +H  EI  G+        + 
Sbjct: 111 CVMCAGAMVHSRIRRLVYGANDLKTGAAGSLVDILRHPGMNHQIEITAGVMADVCAHQLS 170

Query: 143 DFFKERR 149
            FF+ RR
Sbjct: 171 AFFRVRR 177


>gi|226309631|ref|YP_002769525.1| tRNA specific adenosine deaminase [Brevibacillus brevis NBRC
           100599]
 gi|226092579|dbj|BAH41021.1| putative tRNA specific adenosine deaminase [Brevibacillus brevis
           NBRC 100599]
          Length = 160

 Score = 97.4 bits (241), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 54/145 (37%), Positives = 78/145 (53%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           + +M  A+EEA+ AA   E+P+GAV V + +I+ R  N     KD T HAE++AIR    
Sbjct: 8   DYYMKQAMEEARKAAAIGEVPIGAVIVRDGEIVGRGYNLRETQKDPTLHAELIAIREASE 67

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
            L    L    LYVTLEPC MCA AI  +RI ++ YGA +PK G              +H
Sbjct: 68  RLGGWRLIGCTLYVTLEPCPMCAGAIVQSRIEKVVYGARDPKAGCAGTLMNLLAEPRFNH 127

Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149
              +  G+  +   Q++++FF+  R
Sbjct: 128 QVPVIEGVLAEECGQMLKEFFRGLR 152


>gi|90407089|ref|ZP_01215278.1| hypothetical protein PCNPT3_02575 [Psychromonas sp. CNPT3]
 gi|90311811|gb|EAS39907.1| hypothetical protein PCNPT3_02575 [Psychromonas sp. CNPT3]
          Length = 182

 Score = 97.4 bits (241), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 56/143 (39%), Positives = 75/143 (52%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  AL  A  A    E+PVGAV V +N++I+   N +    D  AHAE++A+R     L
Sbjct: 25  WMQYALLLADKAEALGEVPVGAVLVKDNEVIAEGWNLSILSHDACAHAEVMAVREAGHKL 84

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  LYVTLEPC MCA A+  ARI+RL YGA + K G   +     +    +H  
Sbjct: 85  QNYRLIDCTLYVTLEPCPMCAGALVHARIKRLVYGAPDLKTGAAGSVFNLLSHVKLNHQV 144

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           +I  GI   +    I  FFK RR
Sbjct: 145 DITSGILSDQCSTKISQFFKRRR 167


>gi|187934949|ref|YP_001887626.1| tRNA-specific adenosine deaminase [Clostridium botulinum B str.
           Eklund 17B]
 gi|187723102|gb|ACD24323.1| tRNA-specific adenosine deaminase [Clostridium botulinum B str.
           Eklund 17B]
          Length = 152

 Score = 97.4 bits (241), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 49/103 (47%), Positives = 66/103 (64%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           F+  A EEA+ A  + E+P+GAV V ++ +IS+A N    LKD TAHAEILAIR   + L
Sbjct: 3   FLDIAKEEARIAMSKGEVPIGAVIVKDDIVISKAHNLKETLKDATAHAEILAIRKAAKFL 62

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109
               L   ++YVTLEPC+MCA+AI  +RI +L+ G  N   G 
Sbjct: 63  GDWRLKGTEMYVTLEPCSMCASAIIQSRISKLHIGTFNKDMGA 105


>gi|319638138|ref|ZP_07992901.1| cytidine and deoxycytidylate deaminase [Neisseria mucosa C102]
 gi|317400411|gb|EFV81069.1| cytidine and deoxycytidylate deaminase [Neisseria mucosa C102]
          Length = 240

 Score = 97.4 bits (241), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 53/143 (37%), Positives = 79/143 (55%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  A+E+A+ +A   E+PVGAV V   K I+ A N      +V+ HAEI A+    + L
Sbjct: 95  FMRLAIEQARQSAALGEVPVGAVIVYQGKAIAAAHNTCIGDHNVSHHAEINALAAAGKAL 154

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L + D+Y+TLEPC MCA+A+  AR+ R+ YGA+ PK G   +    +     +   
Sbjct: 155 QNYRLEDCDVYITLEPCAMCASALIQARVGRVIYGAAEPKTGAAGSVVDLFADKRLNKHT 214

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
            I  GI  +  + ++QDFF  +R
Sbjct: 215 AILGGILVEECQSVLQDFFAAKR 237


>gi|28868664|ref|NP_791283.1| cytidine/deoxycytidylate deaminase family protein [Pseudomonas
           syringae pv. tomato str. DC3000]
 gi|213972056|ref|ZP_03400150.1| cytidine/deoxycytidylate deaminase family protein [Pseudomonas
           syringae pv. tomato T1]
 gi|301385879|ref|ZP_07234297.1| cytidine/deoxycytidylate deaminase family protein [Pseudomonas
           syringae pv. tomato Max13]
 gi|302063770|ref|ZP_07255311.1| cytidine/deoxycytidylate deaminase family protein [Pseudomonas
           syringae pv. tomato K40]
 gi|302132520|ref|ZP_07258510.1| cytidine/deoxycytidylate deaminase family protein [Pseudomonas
           syringae pv. tomato NCPPB 1108]
 gi|28851903|gb|AAO54978.1| cytidine/deoxycytidylate deaminase family protein [Pseudomonas
           syringae pv. tomato str. DC3000]
 gi|213923189|gb|EEB56790.1| cytidine/deoxycytidylate deaminase family protein [Pseudomonas
           syringae pv. tomato T1]
          Length = 169

 Score = 97.4 bits (241), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 52/127 (40%), Positives = 73/127 (57%)

Query: 23  EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEP 82
           E+PVGAV V N +II R  N      D +AHAE++AIR   R L    LP   LYVTLEP
Sbjct: 31  EVPVGAVVVHNGEIIGRGYNCPISGSDPSAHAEMVAIRDAARALGNYRLPGSTLYVTLEP 90

Query: 83  CTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQ 142
           C+MCA  I  +R+ R+ YGA  PK G +++  QF++    +H      G+  +    ++ 
Sbjct: 91  CSMCAGLIVHSRVARVVYGALEPKAGIVQSQGQFFSQGFLNHRVLFEGGVLGEECGAMLS 150

Query: 143 DFFKERR 149
           +FF+ RR
Sbjct: 151 EFFRLRR 157


>gi|258625208|ref|ZP_05720121.1| zinc-binding domain protein [Vibrio mimicus VM603]
 gi|258582498|gb|EEW07334.1| zinc-binding domain protein [Vibrio mimicus VM603]
          Length = 157

 Score = 97.4 bits (241), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 54/142 (38%), Positives = 77/142 (54%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  A+  A  A  + E+PVGAV V + +II+   N +    D TAHAEI  IR   ++LS
Sbjct: 1   MRRAIMLAAQAEEQGEVPVGAVLVRDGEIIAEGWNCSITHHDATAHAEIEVIRKAGKVLS 60

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
              L +  LYVTLEPC MCA A+  +R++R+ YGA + K G        +     +H   
Sbjct: 61  NYRLLDTTLYVTLEPCPMCAGALLHSRVKRIVYGAPDLKAGAAGTVMDLFNSQASYHYAT 120

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
           +  G+ E+  R  +Q FF+ RR
Sbjct: 121 VEKGLLEEECRAQLQAFFQRRR 142


>gi|116625482|ref|YP_827638.1| tRNA-adenosine deaminase [Candidatus Solibacter usitatus Ellin6076]
 gi|116228644|gb|ABJ87353.1| tRNA-adenosine deaminase [Candidatus Solibacter usitatus Ellin6076]
          Length = 142

 Score = 97.4 bits (241), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 56/142 (39%), Positives = 77/142 (54%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  AL  A++ A   E+PVGAV  L  ++I R  N      D TAHAEILAIR     ++
Sbjct: 1   MYQALALARSGAALGEVPVGAVIALAGEVIGRGSNAPVAQMDPTAHAEILAIREAASRIA 60

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
              L    LY TLEPC MCA A+  ARI R+ +GA + + GG+ +  Q       +H  E
Sbjct: 61  NYRLTGATLYCTLEPCVMCAGALVAARIERVVFGARDLRFGGVRSKFQLADSDLLNHRVE 120

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
           I  G+      Q++++FF+ RR
Sbjct: 121 IVEGVLAVECVQLLREFFENRR 142


>gi|255037951|ref|YP_003088572.1| CMP/dCMP deaminase zinc-binding [Dyadobacter fermentans DSM 18053]
 gi|254950707|gb|ACT95407.1| CMP/dCMP deaminase zinc-binding [Dyadobacter fermentans DSM 18053]
          Length = 150

 Score = 97.4 bits (241), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 54/145 (37%), Positives = 77/145 (53%), Gaps = 5/145 (3%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           + FM  AL  A  A    EIPVGA+ V  ++II R  N+   L DVTAHAE++AI     
Sbjct: 10  HFFMEEALALAHKAYEEGEIPVGALVVAKDRIIGRGYNQTERLNDVTAHAEMIAITAAAD 69

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
            L  + L +  LYVTLEPC MCA A+   +++R+  GA + K G    G         H 
Sbjct: 70  HLGSKYLTDCTLYVTLEPCVMCAGALYWTQVKRVVVGAMDEKRGFSRVGQPL-----LHP 124

Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149
             ++  GI    S++++  FF++ R
Sbjct: 125 KTKLVTGIMATESQELLLKFFRQLR 149


>gi|225016548|ref|ZP_03705740.1| hypothetical protein CLOSTMETH_00455 [Clostridium methylpentosum
           DSM 5476]
 gi|224950657|gb|EEG31866.1| hypothetical protein CLOSTMETH_00455 [Clostridium methylpentosum
           DSM 5476]
          Length = 254

 Score = 97.4 bits (241), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 57/138 (41%), Positives = 75/138 (54%), Gaps = 1/138 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  ALE+A  AA   E+PVGAV V   +++++A NR    K+  AHAE+LAI   CR L 
Sbjct: 1   MRLALEQAARAAELGEVPVGAVLVRGGEVVAQAYNRRETDKNALAHAELLAIDQACRALG 60

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
              L    LYVTLEPC MC  AI  ARI  + YGA + K G   +     T    +H P+
Sbjct: 61  GWRLFGATLYVTLEPCPMCTGAIINARIDHVVYGAKDQKAGSCGSVIDL-TEYPYNHKPQ 119

Query: 128 IYPGISEQRSRQIIQDFF 145
           +  G+ EQ    ++  FF
Sbjct: 120 LTGGVLEQECAGMLSQFF 137


>gi|113477509|ref|YP_723570.1| tRNA-adenosine deaminase [Trichodesmium erythraeum IMS101]
 gi|110168557|gb|ABG53097.1| tRNA-adenosine deaminase [Trichodesmium erythraeum IMS101]
          Length = 156

 Score = 97.1 bits (240), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 57/144 (39%), Positives = 75/144 (52%), Gaps = 1/144 (0%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           +MS  LE A+ A    E+PV A  V  + K+++ A NR     D T HAEILA+R   ++
Sbjct: 13  WMSRVLELAKTAGDAGEVPVAAAVVNSDGKLVTEAQNRRERDFDPTGHAEILALRQAGQV 72

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           L    L +  LYV LEPC MC  AI  ARI  L YGA +PK G +     F      +H 
Sbjct: 73  LQNWHLNQCTLYVNLEPCPMCTGAILQARIGLLVYGADDPKTGTVRTVANFPDSVFSNHR 132

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
             +  GI E   RQ +Q +F + R
Sbjct: 133 LSVLGGIMEGACRQQLQSWFAKFR 156


>gi|313836522|gb|EFS74236.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Propionibacterium acnes HL037PA2]
 gi|314928976|gb|EFS92807.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Propionibacterium acnes HL044PA1]
 gi|314971034|gb|EFT15132.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Propionibacterium acnes HL037PA3]
          Length = 156

 Score = 97.1 bits (240), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 54/143 (37%), Positives = 78/143 (54%), Gaps = 1/143 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M+ AL+ A+ AA   ++P+GAV +  +  ++S AGN      D TAHAE+LAIR      
Sbjct: 8   MTQALDVARRAAAWGDVPIGAVVLGSDGDVLSEAGNERELTGDPTAHAEVLAIRRAAEAR 67

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  L VTLEPCTMCA AI  ARI R+ +GA +PK G + +           H  
Sbjct: 68  DGWRLGDCTLIVTLEPCTMCAGAIVAARIPRVVFGAFDPKAGAVSSLFDVMRDPRLPHRT 127

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+  G+  + S  ++++FF   R
Sbjct: 128 EVVTGVMVEESSALLREFFDGHR 150


>gi|301165417|emb|CBW24988.1| putative nucleotide deaminase [Bacteriovorax marinus SJ]
          Length = 158

 Score = 97.1 bits (240), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 52/144 (36%), Positives = 77/144 (53%), Gaps = 1/144 (0%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
            MS A++EA  A   +E+P+GA  V  +  I+S+  N      D   HAEI+AIR  C+ 
Sbjct: 10  LMSVAMDEAYKAYSIDEVPIGAAIVDESGNILSQCHNEKEHCNDPCGHAEIIAIREACKK 69

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
                L    +YVTLEPC MC +A+  AR+ +L + A +PKGG I      Y     +H+
Sbjct: 70  RGDWRLSGCTIYVTLEPCPMCLSAMIQARVDKLVFAAYDPKGGAISLNYNLYKDKRLNHN 129

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
             +  GI    S +++  FF+E+R
Sbjct: 130 FSVVGGIGHFESSKVLSRFFREKR 153


>gi|330985033|gb|EGH83136.1| cytidine/deoxycytidylate deaminase family protein [Pseudomonas
           syringae pv. lachrymans str. M301315]
          Length = 169

 Score = 97.1 bits (240), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 51/127 (40%), Positives = 72/127 (56%)

Query: 23  EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEP 82
           E+PVGAV V N +II R  N      D +AHAE++AIR     L    LP   LYVTLEP
Sbjct: 31  EVPVGAVVVQNGEIIGRGYNCPISASDPSAHAEMVAIRDAASALDNYRLPGSTLYVTLEP 90

Query: 83  CTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQ 142
           C+MCA  I  +R+ R+ YGA  PK G +++  QF++    +H      G+  +    ++ 
Sbjct: 91  CSMCAGLIVHSRVARVVYGALEPKAGIVQSQGQFFSQGFLNHRVLFEGGVLSEECGAMLS 150

Query: 143 DFFKERR 149
           +FF+ RR
Sbjct: 151 EFFRMRR 157


>gi|328906579|gb|EGG26354.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Propionibacterium sp. P08]
          Length = 160

 Score = 97.1 bits (240), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 54/143 (37%), Positives = 78/143 (54%), Gaps = 1/143 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M+ AL+ A+ AA   ++P+GAV +  +  ++S AGN      D TAHAE+LAIR      
Sbjct: 12  MTQALDVARRAAAWGDVPIGAVVLGSDGDVLSEAGNERELTGDPTAHAEVLAIRRAAEAR 71

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  L VTLEPCTMCA AI  ARI R+ +GA +PK G + +           H  
Sbjct: 72  DGWRLGDCTLIVTLEPCTMCAGAIVAARIPRVVFGAFDPKAGAVSSLFDVMRDPRLPHRT 131

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+  G+  + S  ++++FF   R
Sbjct: 132 EVVTGVMVEESSALLREFFDGHR 154


>gi|310639569|ref|YP_003944327.1| cmp/dcmp deaminase zinc-binding protein [Paenibacillus polymyxa
           SC2]
 gi|309244519|gb|ADO54086.1| CMP/dCMP deaminase zinc-binding protein [Paenibacillus polymyxa
           SC2]
          Length = 165

 Score = 97.1 bits (240), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 53/143 (37%), Positives = 77/143 (53%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  A++EA  A    E+P+GAV V +N+II R  N      D TAHAE++AIR     L
Sbjct: 9   WMREAIQEAYKAEALGEVPIGAVIVKDNEIIGRGYNLRETDTDPTAHAEMVAIRQASEHL 68

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  LYVTLEPC MCA AI  +R+  L YG ++PK G              +H  
Sbjct: 69  GAWRLLDCRLYVTLEPCPMCAGAIVQSRVPHLIYGTTDPKAGCAGTLMNLLQEPRFNHCT 128

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+  G+ ++    ++ +FF++ R
Sbjct: 129 EVTSGVLQEECASMLTNFFRQLR 151


>gi|291569301|dbj|BAI91573.1| putative cytidine/deoxycytidylate deaminase [Arthrospira platensis
           NIES-39]
          Length = 157

 Score = 97.1 bits (240), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 57/144 (39%), Positives = 74/144 (51%), Gaps = 1/144 (0%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           +M  AL+    A    E+PVGA+ V    K+I++  NR     D TAHAEI+A+R   ++
Sbjct: 11  WMQQALKLGAAAGEAGEVPVGALIVNQQGKLIAQGENRRERDPDPTAHAEIIALRQASQV 70

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           L    L    LYVTLEPC MCA AI  ARI  L YG  +PK G I            +H 
Sbjct: 71  LGDWHLNTCTLYVTLEPCPMCAGAILQARIGLLVYGVDDPKTGSIRTVCNLPDSPASYHR 130

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
             +  GI E   RQ +Q +F + R
Sbjct: 131 LPVLGGILESSCRQQLQSWFAQHR 154


>gi|229496208|ref|ZP_04389928.1| cytidine/deoxycytidylate deaminase family protein [Porphyromonas
           endodontalis ATCC 35406]
 gi|229316786|gb|EEN82699.1| cytidine/deoxycytidylate deaminase family protein [Porphyromonas
           endodontalis ATCC 35406]
          Length = 151

 Score = 97.1 bits (240), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 56/144 (38%), Positives = 77/144 (53%), Gaps = 9/144 (6%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  AL+EA  A    E+P+GAV V   +I+ R  NR  +L+D TAHAEILAI      L 
Sbjct: 15  MRAALDEAYLAKEAGEVPIGAVVVYQGRIVGRGRNRVEQLQDPTAHAEILAITAATENLG 74

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
            + L +  LYV+LEPC MC  A+  A++ R+ Y  S+PK G       ++ LA     P 
Sbjct: 75  AKYLTDCTLYVSLEPCVMCMGALRWAQVSRIVYATSDPKAG-------YHVLAPKAPHPR 127

Query: 128 --IYPGISEQRSRQIIQDFFKERR 149
             I  G     +  +++ FF ERR
Sbjct: 128 AVIEVGPFGDEAAGLLRSFFSERR 151


>gi|119946930|ref|YP_944610.1| CMP/dCMP deaminase, zinc-binding [Psychromonas ingrahamii 37]
 gi|119865534|gb|ABM05011.1| CMP/dCMP deaminase, zinc-binding [Psychromonas ingrahamii 37]
          Length = 176

 Score = 97.1 bits (240), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 57/143 (39%), Positives = 77/143 (53%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M+ AL  A  A    EIPVGAV V +NKI++   N +    +  AHAEI+AI+   + +
Sbjct: 17  WMAYALSLADKAESFGEIPVGAVIVKDNKIVAEGWNLSIINHNACAHAEIMAIQSAGQKI 76

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  LYVTLEPC MCA A+  ARI+RL YGA + K G   +          +H  
Sbjct: 77  QNYRLIDCTLYVTLEPCAMCAGALVHARIKRLVYGAGDYKTGAAGSVFNLVQSEQLNHQL 136

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+  G+  + S   I  FFK RR
Sbjct: 137 EVTAGVFAEESATKISAFFKRRR 159


>gi|146283335|ref|YP_001173488.1| cytidine/deoxycytidylate deaminase [Pseudomonas stutzeri A1501]
 gi|145571540|gb|ABP80646.1| cytidine/deoxycytidylate deaminase [Pseudomonas stutzeri A1501]
          Length = 145

 Score = 97.1 bits (240), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 49/127 (38%), Positives = 74/127 (58%)

Query: 23  EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEP 82
           E+PVGAV V   +I+ R  N      D +AHAE++AIR   + L    LP   LYVTLEP
Sbjct: 16  EVPVGAVLVHEGQIVGRGFNCPISRHDPSAHAEMVAIRAAAQALQNYRLPGSTLYVTLEP 75

Query: 83  CTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQ 142
           C+MCA  I  +R++R+ YGA+ PK G + +  QF+     +H   +  G+  +    ++ 
Sbjct: 76  CSMCAGLIVHSRVQRVVYGATEPKAGVVVSRGQFFDQGFLNHRVLVEGGVLAEECGAVLS 135

Query: 143 DFFKERR 149
           +FF++RR
Sbjct: 136 EFFRQRR 142


>gi|182416390|ref|YP_001821456.1| CMP/dCMP deaminase zinc-binding [Opitutus terrae PB90-1]
 gi|177843604|gb|ACB77856.1| CMP/dCMP deaminase zinc-binding [Opitutus terrae PB90-1]
          Length = 178

 Score = 97.1 bits (240), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 1/149 (0%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           +    +MS A  +A +A   +E+P+GAV  L  ++++ A N   E +D TAHAE+LAI  
Sbjct: 19  RDDTFYMSLAFNQAIDAWRLDEVPIGAVIELGGEVVAAAHNTVEEARDPTAHAEMLAITQ 78

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
               L    L    +YVT EPC MC+ A+ ++R++R+ Y   +PK G +   T    L  
Sbjct: 79  AAAKLGDWRLEGATVYVTKEPCPMCSGAMLMSRVKRVCYAVRDPKMGCLGGATNLNDLPR 138

Query: 122 CHHSPEIYP-GISEQRSRQIIQDFFKERR 149
            +H  E+   G+ E   R ++Q FFK +R
Sbjct: 139 VNHHVELTAGGVLEDECRALLQAFFKLKR 167


>gi|301154746|emb|CBW14209.1| tRNA-specific adenosine deaminase [Haemophilus parainfluenzae T3T1]
          Length = 172

 Score = 97.1 bits (240), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 58/140 (41%), Positives = 78/140 (55%), Gaps = 1/140 (0%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           FM  AL  A  A    EIPVGAV V +   I+    N +    D TAHAEI+A+R   + 
Sbjct: 9   FMQHALMLADRAEALGEIPVGAVLVDDEGNILGEGWNLSIIEHDPTAHAEIVALRNAAQN 68

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           +    L    LYVTLEPCTMCA AI  +RI+RL +GAS+ K G + +   F+     +H+
Sbjct: 69  IQNYRLLNTTLYVTLEPCTMCAGAILHSRIKRLVFGASDYKTGAVGSRFHFFDDYKMNHT 128

Query: 126 PEIYPGISEQRSRQIIQDFF 145
            EI  G+  ++  Q + DFF
Sbjct: 129 LEITSGVLVEKCGQKLSDFF 148


>gi|325577729|ref|ZP_08148004.1| tRNA-specific adenosine deaminase [Haemophilus parainfluenzae ATCC
           33392]
 gi|325160474|gb|EGC72600.1| tRNA-specific adenosine deaminase [Haemophilus parainfluenzae ATCC
           33392]
          Length = 172

 Score = 97.1 bits (240), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 58/140 (41%), Positives = 78/140 (55%), Gaps = 1/140 (0%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           FM  AL  A  A    EIPVGAV V +   I+    N +    D TAHAEI+A+R   + 
Sbjct: 9   FMQHALMLADRAEALGEIPVGAVLVGDEGNILGEGWNLSIIENDPTAHAEIVALRNAAQN 68

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           +    L    LYVTLEPCTMCA AI  +RI+RL +GAS+ K G + +   F+     +H+
Sbjct: 69  IQNYRLLNTTLYVTLEPCTMCAGAILHSRIKRLVFGASDYKTGAVGSRFHFFDDYKMNHA 128

Query: 126 PEIYPGISEQRSRQIIQDFF 145
            EI  G+  ++  Q + DFF
Sbjct: 129 LEITSGVLAEKCGQKLSDFF 148


>gi|331019747|gb|EGH99803.1| cytidine/deoxycytidylate deaminase family protein [Pseudomonas
           syringae pv. lachrymans str. M302278PT]
          Length = 169

 Score = 97.1 bits (240), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 52/127 (40%), Positives = 73/127 (57%)

Query: 23  EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEP 82
           E+PVGAV V N +II R  N      D +AHAE++AIR   R L    LP   LYVTLEP
Sbjct: 31  EVPVGAVVVHNGEIIGRGYNCPISGSDPSAHAEMVAIRDAARALGNYRLPGSTLYVTLEP 90

Query: 83  CTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQ 142
           C+MCA  I  +R+ R+ YGA  PK G +++  QF++    +H      G+  +    ++ 
Sbjct: 91  CSMCAGLIVHSRLARVVYGALEPKAGIVQSQGQFFSQGFLNHRVLFEGGVLGEECGAMLS 150

Query: 143 DFFKERR 149
           +FF+ RR
Sbjct: 151 EFFRLRR 157


>gi|291279752|ref|YP_003496587.1| CMP/dCMP deaminase zinc-binding protein [Deferribacter
           desulfuricans SSM1]
 gi|290754454|dbj|BAI80831.1| CMP/dCMP deaminase, zinc-binding protein [Deferribacter
           desulfuricans SSM1]
          Length = 151

 Score = 97.1 bits (240), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 50/143 (34%), Positives = 80/143 (55%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  A+ EA  +    E+PVGAV V ++++IS   N   + K+   HAE++AI    ++L
Sbjct: 9   FMKLAIAEAYKSFEEGEVPVGAVVVRDDEVISYGRNIKGKNKNALLHAEMVAIHKSVKML 68

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L E  LYVT EPC MCA AI   RI+++ +GA  PK GG+ +  + +     +H  
Sbjct: 69  DDWRLNECTLYVTCEPCVMCAGAILHCRIKKVIFGAFEPKFGGVVSNLRVFDTPFFNHKV 128

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
               G+  +   +++++FFK+ R
Sbjct: 129 RYEFGLFSEEISKMMKNFFKQFR 151


>gi|227486589|ref|ZP_03916905.1| nucleoside deaminase [Anaerococcus lactolyticus ATCC 51172]
 gi|227235407|gb|EEI85422.1| nucleoside deaminase [Anaerococcus lactolyticus ATCC 51172]
          Length = 158

 Score = 97.1 bits (240), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 56/149 (37%), Positives = 82/149 (55%), Gaps = 3/149 (2%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           K    FM+ A+ EA+ A   +E+P+GAV V  ++I+ R  N   + K    HAEI A++ 
Sbjct: 7   KADKFFMTEAINEAKLAKSIDEVPIGAVVVCGDRIVGRGHNFTYKGKSALNHAEIYALKE 66

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
             + +    L E  +YVTLEPC MCA AI  +R++RL     +PK GG    T F    +
Sbjct: 67  AGKNIGDFRLEECTMYVTLEPCLMCAGAIMHSRVKRLVIACKDPKRGGF--STSFIDKDS 124

Query: 122 CH-HSPEIYPGISEQRSRQIIQDFFKERR 149
            H + PEI  G+ E+ S + +Q FF+  R
Sbjct: 125 PHLNVPEISYGLMEEESLKELQSFFRALR 153


>gi|212710654|ref|ZP_03318782.1| hypothetical protein PROVALCAL_01720 [Providencia alcalifaciens DSM
           30120]
 gi|212686735|gb|EEB46263.1| hypothetical protein PROVALCAL_01720 [Providencia alcalifaciens DSM
           30120]
          Length = 170

 Score = 97.1 bits (240), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 54/143 (37%), Positives = 79/143 (55%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  ALE A+ A    EIPVGA+ V +N++++   N + E  D TAHAEI+ ++     L
Sbjct: 10  WMLQALELAKKAQNAGEIPVGALLVKDNQLVATGWNHSIENHDPTAHAEIVTLKQAGTAL 69

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  LYVTLEPC MCA A+  +RI R+ YGA + K G   +     +    +H  
Sbjct: 70  QNYRLLDTTLYVTLEPCIMCAGAMIHSRIGRVVYGAKDFKTGACGSFINIMSQPGLNHYV 129

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+  G+ E     ++ +FFK RR
Sbjct: 130 EVTSGVLEDACSSMLSEFFKMRR 152


>gi|194246540|ref|YP_002004179.1| Cytosine/adenosine deaminase [Candidatus Phytoplasma mali]
 gi|193806897|emb|CAP18326.1| Cytosine/adenosine deaminase [Candidatus Phytoplasma mali]
          Length = 151

 Score = 97.1 bits (240), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 51/143 (35%), Positives = 80/143 (55%), Gaps = 1/143 (0%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  A +EA+ A  +NE+PVGAVAVLNN+II+R  N   + +    HAE L +    +  
Sbjct: 8   FMKEAFKEAKKAYYKNEVPVGAVAVLNNQIIARTHNNCEKKQIFFGHAEFLLMMKLNKKF 67

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L ++++YVTLEPC MCA A+   +I ++YY  +N K G I++          H   
Sbjct: 68  KNRRLNKINIYVTLEPCLMCAGALIQTQINKVYYSVNNYKSGSIDSVISLLKFKYPHKII 127

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
               G+  + ++ ++++FFK  R
Sbjct: 128 T-ESGLLAKENKILLKNFFKNLR 149


>gi|160931212|ref|ZP_02078614.1| hypothetical protein CLOLEP_00049 [Clostridium leptum DSM 753]
 gi|156869767|gb|EDO63139.1| hypothetical protein CLOLEP_00049 [Clostridium leptum DSM 753]
          Length = 163

 Score = 97.1 bits (240), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 53/128 (41%), Positives = 71/128 (55%), Gaps = 1/128 (0%)

Query: 22  NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81
            E+PVGAV V +  +IS   NR    K+   HAE+ AI   C+ L    L + DLYVTLE
Sbjct: 29  GEVPVGAVIVKDGVLISAGRNRRELGKNALYHAELEAIDGACKALGGWRLWQCDLYVTLE 88

Query: 82  PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141
           PC MC  AI  ARIRRL YGA +PK G   +    + L   +H P++  G+ E+   + +
Sbjct: 89  PCPMCTGAIINARIRRLCYGAKDPKAGSCGSVVNLFELPY-NHKPQVISGVLEEACAERL 147

Query: 142 QDFFKERR 149
             FF+  R
Sbjct: 148 SGFFRSLR 155


>gi|323492402|ref|ZP_08097552.1| tRNA-specific adenosine-34 deaminase [Vibrio brasiliensis LMG
           20546]
 gi|323313363|gb|EGA66477.1| tRNA-specific adenosine-34 deaminase [Vibrio brasiliensis LMG
           20546]
          Length = 181

 Score = 97.1 bits (240), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 52/143 (36%), Positives = 77/143 (53%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
           +  +FM  A+E AQ+A  + E+PVGAV V + +II+   N +    D TAHAE+  IR  
Sbjct: 9   QDELFMRRAMELAQHAEEQGEVPVGAVLVKDGEIIAEGWNESIGSHDATAHAEMQTIRKA 68

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
              L    L +  LYVTLEPC MCA A+  +R++R+ +GA + K G        +     
Sbjct: 69  GLALENYRLLDTTLYVTLEPCPMCAGALLHSRVKRIVFGAPDLKAGAAGTVLNLFEHQAA 128

Query: 123 HHSPEIYPGISEQRSRQIIQDFF 145
           +H  ++  G+ E   R  +Q FF
Sbjct: 129 YHYADVEQGLLEDECRVQLQSFF 151


>gi|71909993|ref|YP_281543.1| tRNA-specific adenosine deaminase [Streptococcus pyogenes MGAS5005]
 gi|60416281|sp|P68999|TADA_STRP1 RecName: Full=tRNA-specific adenosine deaminase
 gi|71852775|gb|AAZ50798.1| tRNA-specific adenosine deaminase [Streptococcus pyogenes MGAS5005]
          Length = 171

 Score = 97.1 bits (240), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 54/149 (36%), Positives = 81/149 (54%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +++   FM  AL+EA+ +  + EIP+G V V + +II R  N   E      HAE++AI 
Sbjct: 5   LEEQTYFMQEALKEAEKSLQKAEIPIGCVIVKDGEIIGRGHNAREESNQAIMHAEMMAIN 64

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
                     L +  L+VT+EPC MC+ AI LARI  + YGASN K GG+++  Q  T  
Sbjct: 65  EANAHEGNWRLLDTTLFVTIEPCVMCSGAIGLARIPHVIYGASNQKFGGVDSLYQILTDE 124

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  ++  G+       I+Q FF++ R
Sbjct: 125 RLNHRVQVERGLLAADCANIMQTFFRQGR 153


>gi|326790135|ref|YP_004307956.1| CMP/dCMP deaminase zinc-binding protein [Clostridium lentocellum
           DSM 5427]
 gi|326540899|gb|ADZ82758.1| CMP/dCMP deaminase zinc-binding protein [Clostridium lentocellum
           DSM 5427]
          Length = 175

 Score = 97.1 bits (240), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 59/152 (38%), Positives = 88/152 (57%), Gaps = 6/152 (3%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M+K   FM  AL EA+ A   +E P+GAV V   ++I R  NR    K+  AHAE++AI 
Sbjct: 1   MEKDIEFMKQALIEAEKAFTLDEAPIGAVIVYKEQVIGRGHNRRNTDKNALAHAEVMAIN 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPK---GGGIENGTQFY 117
             C+ +    L E  +Y+TLEPC MC+ AI  AR+ R+ +GA +PK   GG + N  Q  
Sbjct: 61  EACKHIKDWRLEECTIYITLEPCPMCSGAIVQARLPRVVFGARSPKAGFGGSVLNILQMD 120

Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
            L   +H  E+  G+ E+ + Q+++ +FK+ R
Sbjct: 121 EL---NHRCEVVEGVCEEEASQLLKSYFKQMR 149


>gi|290969052|ref|ZP_06560587.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Megasphaera genomosp. type_1 str. 28L]
 gi|290781008|gb|EFD93601.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Megasphaera genomosp. type_1 str. 28L]
          Length = 157

 Score = 96.7 bits (239), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 53/112 (47%), Positives = 65/112 (58%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M    ++M  AL EA+ A    EIP+GAV V  N II+RA N    L   TAHAE+LAI 
Sbjct: 1   MTLDELYMGKALAEAETAFAVEEIPIGAVIVHENTIIARAYNLRETLPCATAHAELLAIE 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN 112
             CR L++  L    LYVT EPC MCA AI  +R+ RL YG  +PK G +  
Sbjct: 61  KACRHLNRWRLSGCTLYVTTEPCPMCAGAIVNSRLDRLVYGCPDPKAGAVHT 112


>gi|163784431|ref|ZP_02179312.1| Cytosine/adenosine deaminase [Hydrogenivirga sp. 128-5-R1-1]
 gi|159880298|gb|EDP73921.1| Cytosine/adenosine deaminase [Hydrogenivirga sp. 128-5-R1-1]
          Length = 146

 Score = 96.7 bits (239), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 49/138 (35%), Positives = 82/138 (59%), Gaps = 1/138 (0%)

Query: 12  LEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEIL 71
           +EEA+ A  ++E+PVGA+ V N +IIS+  N+     +   HAEI+AI   C+ L    L
Sbjct: 10  IEEAKKAYKKDEVPVGALIVRNGEIISKGHNQRITKNNALYHAEIVAIEKACKKLKSWRL 69

Query: 72  PEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPG 131
            + +++V+LEPC MCA AI  +RI+++Y+ A + KGG + +  + +         + Y  
Sbjct: 70  DDCEIWVSLEPCVMCAGAIMQSRIKKVYFLAQDEKGGAVISKYRLFDDNKLPFKVD-YEY 128

Query: 132 ISEQRSRQIIQDFFKERR 149
           I  + +  I++ FFKE+R
Sbjct: 129 IPVKEASDILKRFFKEKR 146


>gi|313668625|ref|YP_004048909.1| cytosine deaminase [Neisseria lactamica ST-640]
 gi|313006087|emb|CBN87548.1| putative cytosine deaminase (EC 3.5.4.1) [Neisseria lactamica
           020-06]
          Length = 239

 Score = 96.7 bits (239), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 55/143 (38%), Positives = 80/143 (55%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  ALE+A+ +AL  EIPVGAV V + KII+ A N      +V+ HAEI A+      +
Sbjct: 95  FMGLALEQAKLSALMGEIPVGAVIVSDGKIIASAHNTCIADCNVSRHAEINALAQAGSKI 154

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L   D+Y+TLEPC MCA+A+  AR++R+ YGA  PK G   +    +     +   
Sbjct: 155 QNYRLDGCDIYITLEPCAMCASALIQARVKRVIYGAGEPKTGAAGSIVNLFADKRLNTHT 214

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
            I  GI ++  R ++  FF+ +R
Sbjct: 215 AIRGGILQEECRAVLSRFFQNKR 237


>gi|327481727|gb|AEA85037.1| cytidine/deoxycytidylate deaminase [Pseudomonas stutzeri DSM 4166]
          Length = 160

 Score = 96.7 bits (239), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 49/127 (38%), Positives = 74/127 (58%)

Query: 23  EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEP 82
           E+PVGAV V   +I+ R  N      D +AHAE++AIR   + L    LP   LYVTLEP
Sbjct: 31  EVPVGAVLVHEGQIVGRGFNCPISRHDPSAHAEMVAIRAAAQALQNYRLPGSTLYVTLEP 90

Query: 83  CTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQ 142
           C+MCA  I  +R++R+ YGA+ PK G + +  QF+     +H   +  G+  +    ++ 
Sbjct: 91  CSMCAGLIVHSRVQRVVYGATEPKAGVVVSRGQFFDQGFLNHRVLVEGGVLAEECGAVLS 150

Query: 143 DFFKERR 149
           +FF++RR
Sbjct: 151 EFFRQRR 157


>gi|85059758|ref|YP_455460.1| tRNA-specific adenosine deaminase [Sodalis glossinidius str.
           'morsitans']
 gi|84780278|dbj|BAE75055.1| conserved hypothetical protein [Sodalis glossinidius str.
           'morsitans']
          Length = 169

 Score = 96.7 bits (239), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 59/144 (40%), Positives = 75/144 (52%)

Query: 6   VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           V+M  AL  A  A    E+PVGAV VLN  II    NR+    D TAHAEI+A+R G + 
Sbjct: 9   VWMRHALMLAGRAEAEGEVPVGAVLVLNGAIIGEGWNRSIGHHDPTAHAEIMALRQGGQQ 68

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
                L +  LYVTLEPC MCA A+  ARI RL +GA + K G   +          +H 
Sbjct: 69  AGNYRLLKATLYVTLEPCVMCAGAMIHARIGRLVFGARDEKTGAAGSLMDVLGHPGMNHR 128

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
            E+   +  Q     + DFF+ RR
Sbjct: 129 IELTGDMLAQACAAQLSDFFRRRR 152


>gi|315924779|ref|ZP_07920996.1| tRNA-specific adenosine deaminase [Pseudoramibacter alactolyticus
           ATCC 23263]
 gi|315621678|gb|EFV01642.1| tRNA-specific adenosine deaminase [Pseudoramibacter alactolyticus
           ATCC 23263]
          Length = 164

 Score = 96.7 bits (239), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 52/142 (36%), Positives = 76/142 (53%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  AL+E + A    E PVGAV V   ++++   NR   L+D TAHAE+L IR   + L
Sbjct: 19  WMRLALDEGRQALAAGEFPVGAVVVCGGQVVAADHNRKETLQDPTAHAELLVIRAAAQRL 78

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
            +  L +  LYVT EPC MC  A+  AR+ +L YGA+  + G +E            ++ 
Sbjct: 79  GRWRLDDCTLYVTAEPCPMCMGAVIQARLAKLVYGAAEKRFGAVETTADLGRHPMLANAM 138

Query: 127 EIYPGISEQRSRQIIQDFFKER 148
           EIY GI E    ++++  F  R
Sbjct: 139 EIYAGICENDCIELMKQCFYNR 160


>gi|146312685|ref|YP_001177759.1| tRNA-specific adenosine deaminase [Enterobacter sp. 638]
 gi|145319561|gb|ABP61708.1| tRNA-adenosine deaminase [Enterobacter sp. 638]
          Length = 169

 Score = 96.7 bits (239), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 54/143 (37%), Positives = 76/143 (53%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  AL  A+ A    E+PVGAV V NN++I    NR     D TAHAEI+A+R G  +L
Sbjct: 11  WMRHALLLAKRAWDEGEVPVGAVLVHNNQVIGEGWNRPIGRHDPTAHAEIMALRQGGLVL 70

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  LYVTLEPC MC+ A+  +RI  L +GA + K G   +          +H  
Sbjct: 71  QNYRLLDTTLYVTLEPCVMCSGAMVHSRIGTLVFGARDEKTGAAGSLMNVLGHPGMNHQV 130

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           ++  G+       ++ DFF+ RR
Sbjct: 131 QVIDGVLAPECSGLLSDFFRMRR 153


>gi|331003430|ref|ZP_08326929.1| hypothetical protein HMPREF0491_01791 [Lachnospiraceae oral taxon
           107 str. F0167]
 gi|330412476|gb|EGG91865.1| hypothetical protein HMPREF0491_01791 [Lachnospiraceae oral taxon
           107 str. F0167]
          Length = 155

 Score = 96.7 bits (239), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 56/153 (36%), Positives = 83/153 (54%), Gaps = 6/153 (3%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M + N F+  A+++A+ A    ++P+G V V  +KII+R  NR  + K   +HAEI+AI+
Sbjct: 1   MDRDNYFLKEAVKQAKKAGEIGDVPIGCVIVFEDKIIARGYNRRNKDKSTLSHAEIIAIK 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
             C+ +    L +  +Y+TLEPC MCA AI  +RI+R+  GA NPK G   +        
Sbjct: 61  KACKKIGDWRLEDCTMYITLEPCPMCAGAIIQSRIKRVVLGAMNPKAGCAGSIINILQTE 120

Query: 121 TCHHSPEIY----PGISEQRSRQIIQDFFKERR 149
             +H  EI     P  SE  S  ++  FFK  R
Sbjct: 121 GFNHKTEISLIDEPLHSECVS--LLTSFFKALR 151


>gi|170718532|ref|YP_001783741.1| CMP/dCMP deaminase zinc-binding [Haemophilus somnus 2336]
 gi|168826661|gb|ACA32032.1| CMP/dCMP deaminase zinc-binding [Haemophilus somnus 2336]
          Length = 166

 Score = 96.7 bits (239), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 59/143 (41%), Positives = 78/143 (54%), Gaps = 1/143 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  AL  A  A    EIPVGAV V     I++   N +    D TAHAEI+A+R   + L
Sbjct: 10  MRYALSLADKAEALGEIPVGAVLVDKQGDILAEGWNLSIIHNDPTAHAEIIALRQAGQKL 69

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  LYVTLEPCTMCA AI  +RI RL +GA + K G + +   F+     +H  
Sbjct: 70  QNYRLLDTTLYVTLEPCTMCAGAILHSRIGRLVFGAYDYKTGAVGSRFHFFNDYKMNHML 129

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           EI  G+ ++   Q I  FF++RR
Sbjct: 130 EITGGVLQEECSQKISTFFQKRR 152


>gi|325128107|gb|EGC51002.1| tRNA-specific adenosine deaminase [Neisseria meningitidis N1568]
          Length = 163

 Score = 96.7 bits (239), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 56/143 (39%), Positives = 80/143 (55%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  AL +A+ +A   EIPVGAV V + KII+ A N      +V+ HAEI A+    R +
Sbjct: 19  FMREALRQAEQSAADGEIPVGAVIVSDGKIIASAHNTCIADCNVSRHAEINALAQAGREI 78

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L   D+Y+TLEPC MCA+A+  ARIRR+ YGA+ PK G   +    +     +   
Sbjct: 79  QNYRLDGCDIYITLEPCAMCASALIQARIRRVIYGAAEPKTGAAGSIVNLFADKRLNTHT 138

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
            I  GI ++  R ++  FF+ +R
Sbjct: 139 AIRGGILQEECRAVLSRFFQNKR 161


>gi|329570031|gb|EGG51786.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Enterococcus faecalis TX1467]
          Length = 144

 Score = 96.7 bits (239), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 50/127 (39%), Positives = 71/127 (55%)

Query: 23  EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEP 82
           E+P+GAV V   +II R  N     ++ TAHAE+ AI+  CR +    L E  L+VTLEP
Sbjct: 3   EVPIGAVIVRQGEIIGRGHNLREARQEATAHAEMYAIQEACRGIENWRLEETQLFVTLEP 62

Query: 83  CTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQ 142
           C MC+ A+ LARI  +YYGA++PK G              +H   +  G+ E+  R ++ 
Sbjct: 63  CPMCSGAMLLARIPEVYYGATDPKAGTAGTLMNLLEDERFNHVAYVEAGVLEEECRLLLV 122

Query: 143 DFFKERR 149
            FFK+ R
Sbjct: 123 QFFKKLR 129


>gi|283131371|dbj|BAI63375.1| tRNA-specific adenosine deaminase [Streptococcus dysgalactiae
           subsp. equisimilis]
 gi|283131431|dbj|BAI63432.1| tRNA-specific adenosine deaminase [Streptococcus dysgalactiae
           subsp. equisimilis]
          Length = 183

 Score = 96.7 bits (239), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 53/149 (35%), Positives = 81/149 (54%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +++   FM  AL+EA+ +  + EIP+G V V + +II R  N   E      HAE++AI 
Sbjct: 13  LEEQTYFMQEALKEAEKSLQKAEIPIGCVIVKDGEIIGRGHNAREESNQAIMHAEMMAIN 72

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
                     L +  ++VT+EPC MC+ AI LARI  + YGASN K GG ++  Q  T  
Sbjct: 73  EANAYEGNWRLLDTTMFVTIEPCVMCSGAIGLARIPHVIYGASNQKFGGTDSLYQILTDE 132

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  ++  G+  +    I+Q FF++ R
Sbjct: 133 RLNHRVQVERGLLAEDCANIMQTFFRQGR 161


>gi|330872834|gb|EGH06983.1| cytidine/deoxycytidylate deaminase, zinc-binding region
           [Pseudomonas syringae pv. morsprunorum str. M302280PT]
          Length = 169

 Score = 96.7 bits (239), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 51/127 (40%), Positives = 73/127 (57%)

Query: 23  EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEP 82
           E+PVGAV V N +II R  N      D +AHAE++AIR   + L    LP   LYVTLEP
Sbjct: 31  EVPVGAVVVQNGEIIGRGYNCPISGSDPSAHAEMVAIRDAAKALDNYRLPGSTLYVTLEP 90

Query: 83  CTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQ 142
           C+MCA  I  +R+ R+ YGA  PK G +++  QF++    +H      G+  +    ++ 
Sbjct: 91  CSMCAGLIVHSRVARVVYGALEPKAGIVQSQGQFFSQGFLNHRVLFEGGVLGEECGAMLS 150

Query: 143 DFFKERR 149
           +FF+ RR
Sbjct: 151 EFFRMRR 157


>gi|323487362|ref|ZP_08092661.1| tRNA-specific adenosine deaminase [Clostridium symbiosum WAL-14163]
 gi|323399323|gb|EGA91722.1| tRNA-specific adenosine deaminase [Clostridium symbiosum WAL-14163]
          Length = 184

 Score = 96.7 bits (239), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 53/143 (37%), Positives = 76/143 (53%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  A+ EA+ A    E+P+G V V   KII R  NR    K+V +HAEI AI+  C+ +
Sbjct: 36  YMRAAIREAKKAYALGEVPIGCVIVFEGKIIGRGYNRRIADKNVLSHAEINAIKKACKKM 95

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L    +Y+TLEPC MCA AI  ARI ++  G+ NPK G   +          +H  
Sbjct: 96  GDWRLEGCTMYITLEPCPMCAGAIVQARIPKVLIGSMNPKAGCAGSVMNLLDEKGFNHQV 155

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E   GI  +    ++++FF+E R
Sbjct: 156 ETEIGILGEECSGMLKEFFRELR 178


>gi|283131386|dbj|BAI63389.1| tRNA-specific adenosine deaminase [Streptococcus dysgalactiae
           subsp. equisimilis]
          Length = 183

 Score = 96.7 bits (239), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 54/143 (37%), Positives = 78/143 (54%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  AL+EA+ +  + EIP+G V V + +II R  N   E      HAE++AI       
Sbjct: 19  FMQEALKEAEKSLQKAEIPIGCVIVKDGEIIGRGHNAREESNQAIMHAEMMAINEANAHE 78

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  L+VT+EPC MC+ AI LARI  + YGASN K GG ++  Q  T    +H  
Sbjct: 79  GNWRLLDTTLFVTIEPCVMCSGAIGLARIPHVIYGASNQKFGGTDSLYQILTDERLNHRV 138

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           ++  G+  +    I+Q FF++ R
Sbjct: 139 QVERGLLAEDCANIMQTFFRQGR 161


>gi|222053168|ref|YP_002535530.1| CMP/dCMP deaminase zinc-binding [Geobacter sp. FRC-32]
 gi|221562457|gb|ACM18429.1| CMP/dCMP deaminase zinc-binding [Geobacter sp. FRC-32]
          Length = 161

 Score = 96.7 bits (239), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 50/129 (38%), Positives = 71/129 (55%)

Query: 21  RNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80
           R E+P+GAV V + KII+R  N    ++D +AHAE++AIR G +      L    LYVTL
Sbjct: 24  RGEVPIGAVIVRDGKIIARGHNLREGMQDPSAHAELIAIRRGAKKNGNWRLLGTTLYVTL 83

Query: 81  EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140
           EPC MC  AI LAR+ ++ +G  +PKGG   +       +  +H   +  GI E     +
Sbjct: 84  EPCLMCMGAILLARVEKVVFGCHDPKGGAAGSLYNLSDDSRLNHRVTLVSGIREAECAAL 143

Query: 141 IQDFFKERR 149
           + DFF   R
Sbjct: 144 LSDFFAALR 152


>gi|282899006|ref|ZP_06306988.1| Cytidine/deoxycytidylate deaminase, zinc-binding region protein
           [Cylindrospermopsis raciborskii CS-505]
 gi|281196146|gb|EFA71061.1| Cytidine/deoxycytidylate deaminase, zinc-binding region protein
           [Cylindrospermopsis raciborskii CS-505]
          Length = 154

 Score = 96.7 bits (239), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 58/143 (40%), Positives = 77/143 (53%), Gaps = 1/143 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           MS AL+ AQ A    E+PVG V V     +I +  NR +  +D TAHAEI+AIR   R L
Sbjct: 1   MSEALKLAQIAGDAGEVPVGCVIVNPQGNLIGQGENRKQRDQDPTAHAEIIAIRSAARTL 60

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  LYVTLEPC MCA AI  AR++ L Y   +PK G I            +H  
Sbjct: 61  QNWHLDQCTLYVTLEPCPMCAGAIIHARLQTLVYAVDDPKTGAIRTVINIPGSPASNHRL 120

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           ++  G+ E  SR+ +Q +F  +R
Sbjct: 121 QVIGGMLESASREKLQSWFVGQR 143


>gi|307245435|ref|ZP_07527523.1| tRNA-specific adenosine deaminase [Actinobacillus pleuropneumoniae
           serovar 1 str. 4074]
 gi|307254389|ref|ZP_07536227.1| tRNA-specific adenosine deaminase [Actinobacillus pleuropneumoniae
           serovar 9 str. CVJ13261]
 gi|307258848|ref|ZP_07540580.1| tRNA-specific adenosine deaminase [Actinobacillus pleuropneumoniae
           serovar 11 str. 56153]
 gi|306853776|gb|EFM85993.1| tRNA-specific adenosine deaminase [Actinobacillus pleuropneumoniae
           serovar 1 str. 4074]
 gi|306862688|gb|EFM94644.1| tRNA-specific adenosine deaminase [Actinobacillus pleuropneumoniae
           serovar 9 str. CVJ13261]
 gi|306867199|gb|EFM99055.1| tRNA-specific adenosine deaminase [Actinobacillus pleuropneumoniae
           serovar 11 str. 56153]
          Length = 196

 Score = 96.7 bits (239), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 60/140 (42%), Positives = 76/140 (54%), Gaps = 1/140 (0%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           FM  ALE A  A    EIPVGAV V     II    N+  +L D +AHAE+LAIR   ++
Sbjct: 43  FMRYALELADRAEAIGEIPVGAVLVDQEGNIIGEGWNQVIQLSDPSAHAEMLAIRQAGKV 102

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
                L +  LY TLEPCTMCA AI  +R+RRL +GAS+ K G I +    +     +H 
Sbjct: 103 QRNYRLLDCTLYATLEPCTMCAGAILHSRLRRLVFGASDYKTGAIGSRFHLFEDYKMNHF 162

Query: 126 PEIYPGISEQRSRQIIQDFF 145
            EI  G+  +   Q I  FF
Sbjct: 163 LEIRGGVLAEECSQKISRFF 182


>gi|225575495|ref|ZP_03784105.1| hypothetical protein RUMHYD_03586 [Blautia hydrogenotrophica DSM
           10507]
 gi|225037292|gb|EEG47538.1| hypothetical protein RUMHYD_03586 [Blautia hydrogenotrophica DSM
           10507]
          Length = 183

 Score = 96.7 bits (239), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 52/149 (34%), Positives = 80/149 (53%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M +   +M  A+ +A+ A   +E+P+G V V + KII+R  NR    ++  +HAE+ AI+
Sbjct: 24  MTEQEKYMREAIRQAKKAWALDEVPIGCVIVFDGKIIARGYNRRNTDRNTLSHAELNAIK 83

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              + L    L    +YVTLEPC MCA AI  ARI  +  G+ NPK G   +      + 
Sbjct: 84  KASKKLGDWRLEGCTMYVTLEPCQMCAGAIVQARIDEVVIGSMNPKAGCAGSVLNLLDIP 143

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  +I  GI ++    ++ DFF+E R
Sbjct: 144 QFNHQVKITRGILQEECSALLSDFFRELR 172


>gi|323340129|ref|ZP_08080393.1| tRNA-specific adenosine deaminase [Lactobacillus ruminis ATCC
           25644]
 gi|323092320|gb|EFZ34928.1| tRNA-specific adenosine deaminase [Lactobacillus ruminis ATCC
           25644]
          Length = 153

 Score = 96.7 bits (239), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 56/143 (39%), Positives = 73/143 (51%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  AL+EA++A    E+P+G V V   +II R  NR  EL+D T HAE++AIR   R L
Sbjct: 9   FMKEALKEAKSAYEAGEVPIGCVIVSGGRIIGRGHNRREELQDATEHAEMIAIREANRTL 68

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L    L+VTLEPC MC  AI  ARI  ++YGA + K G              +H  
Sbjct: 69  GSFRLENCALFVTLEPCPMCTGAIINARIPEVFYGAPDEKAGTCGTLMNLLGDERFNHRA 128

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
            I  G       +++ DFF   R
Sbjct: 129 SIEKGCLGNECGKLLSDFFASLR 151


>gi|52424459|ref|YP_087596.1| hypothetical protein MS0404 [Mannheimia succiniciproducens MBEL55E]
 gi|52306511|gb|AAU37011.1| unknown [Mannheimia succiniciproducens MBEL55E]
          Length = 176

 Score = 96.7 bits (239), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 59/143 (41%), Positives = 79/143 (55%), Gaps = 1/143 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M+ AL  A  A    EIPVGAV V     II    N +    D TAHAEI+A+R   + +
Sbjct: 12  MNRALFLADKAEALGEIPVGAVLVDERGNIIGEGWNLSIVNSDPTAHAEIIALRNAAQKI 71

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L    LYVTLEPCTMCA AI  +RI+RL +GAS+ K G + +   F+     +H  
Sbjct: 72  QNYRLLNTTLYVTLEPCTMCAGAILHSRIKRLVFGASDYKTGAVGSRFHFFEDYKMNHGV 131

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           EI  G+ + +  Q +  FF++RR
Sbjct: 132 EITSGVLQDQCSQKLSRFFQKRR 154


>gi|323128130|gb|ADX25427.1| tRNA-specific adenosine deaminase [Streptococcus dysgalactiae
           subsp. equisimilis ATCC 12394]
          Length = 175

 Score = 96.7 bits (239), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 53/149 (35%), Positives = 81/149 (54%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +++   FM  AL+EA+ +  + EIP+G V V + +II R  N   E      HAE++AI 
Sbjct: 5   LEEQTYFMQEALKEAEKSLQKAEIPIGCVIVKDGEIIGRGHNAREESNQAIMHAEMMAIN 64

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
                     L +  ++VT+EPC MC+ AI LARI  + YGASN K GG ++  Q  T  
Sbjct: 65  EANAYEGNWRLLDTTMFVTIEPCVMCSGAIGLARIPHVIYGASNQKFGGTDSLYQILTDE 124

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  ++  G+  +    I+Q FF++ R
Sbjct: 125 RLNHRVQVERGLLAEDCANIMQTFFRQGR 153


>gi|323694203|ref|ZP_08108379.1| cytidine and deoxycytidylate deaminase [Clostridium symbiosum
           WAL-14673]
 gi|323501676|gb|EGB17562.1| cytidine and deoxycytidylate deaminase [Clostridium symbiosum
           WAL-14673]
          Length = 155

 Score = 96.7 bits (239), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 53/143 (37%), Positives = 76/143 (53%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  A+ EA+ A    E+P+G V V   KII R  NR    K+V +HAEI AI+  C+ +
Sbjct: 7   YMRAAIREAKKAYALGEVPIGCVIVFEGKIIGRGYNRRIADKNVLSHAEINAIKKACKKM 66

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L    +Y+TLEPC MCA AI  ARI ++  G+ NPK G   +          +H  
Sbjct: 67  GDWRLEGCTMYITLEPCPMCAGAIVQARIPKVLIGSMNPKAGCAGSVMNLLDEKGFNHQV 126

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E   GI  +    ++++FF+E R
Sbjct: 127 ETEIGILGEECSGMLKEFFRELR 149


>gi|283131399|dbj|BAI63401.1| tRNA-specific adenosine deaminase [Streptococcus dysgalactiae
           subsp. equisimilis]
          Length = 175

 Score = 96.3 bits (238), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 54/143 (37%), Positives = 78/143 (54%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  AL+EA+ +  + EIP+G V V + +II R  N   E      HAE++AI       
Sbjct: 11  FMQEALKEAEKSLQKAEIPIGCVIVKDGEIIGRGHNAREESNQAIMHAEMMAINEANAHE 70

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  L+VT+EPC MC+ AI LARI  + YGASN K GG ++  Q  T    +H  
Sbjct: 71  GNWRLLDTTLFVTIEPCVMCSGAIGLARIPHVIYGASNQKFGGTDSLYQILTDERLNHRV 130

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           ++  G+  +    I+Q FF++ R
Sbjct: 131 QVERGLLAEDCANIMQTFFRQGR 153


>gi|283131328|dbj|BAI63333.1| tRNA-specific adenosine deaminase [Streptococcus dysgalactiae
           subsp. equisimilis]
          Length = 183

 Score = 96.3 bits (238), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 54/149 (36%), Positives = 81/149 (54%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +++   FM  AL+EA+ +  + EIP+G V V + +II R  N   E      HAE++AI 
Sbjct: 13  LEEQTYFMQEALKEAEKSLQKAEIPIGCVIVKDGEIIGRGHNAREESNQAIMHAEMMAIN 72

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
                     L +  L+VT+EPC MC+ AI LARI  + YGASN K GG ++  Q  T  
Sbjct: 73  EANAHEGNWRLLDTTLFVTIEPCVMCSGAIGLARIPHVIYGASNQKFGGADSLYQILTDE 132

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  ++  G+  +    I+Q FF++ R
Sbjct: 133 RLNHRVQVERGLLAEDCANIMQTFFRQGR 161


>gi|262200019|ref|YP_003271228.1| CMP/dCMP deaminase zinc-binding protein [Haliangium ochraceum DSM
           14365]
 gi|262083366|gb|ACY19335.1| CMP/dCMP deaminase zinc-binding protein [Haliangium ochraceum DSM
           14365]
          Length = 147

 Score = 96.3 bits (238), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 52/124 (41%), Positives = 73/124 (58%), Gaps = 1/124 (0%)

Query: 22  NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81
            ++PVGAV V + +II+R  NR +  KD TAHAE+ A+R   R L    + E  LYVT E
Sbjct: 15  GDVPVGAVIVCDGEIIARGRNRRQLDKDPTAHAEVEALRSASRSLGNWRV-EGTLYVTQE 73

Query: 82  PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141
           PC MCA A+  AR++RL YG  NPK G +    +  + A  +H  E+  G+S Q    ++
Sbjct: 74  PCPMCAGALVNARVQRLVYGCPNPKAGSVHTLYRLVSDARLNHRIEVRGGVSAQACTGLL 133

Query: 142 QDFF 145
           + FF
Sbjct: 134 KSFF 137


>gi|207743199|ref|YP_002259591.1| cytosine/adenosine deaminase protein [Ralstonia solanacearum
           IPO1609]
 gi|206594596|emb|CAQ61523.1| cytosine/adenosine deaminase protein [Ralstonia solanacearum
           IPO1609]
          Length = 178

 Score = 96.3 bits (238), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 53/148 (35%), Positives = 78/148 (52%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           ++   +M  AL +A+ A    E+PVGAV V  N+I+    N      D +AHAE+ A+R 
Sbjct: 12  ERDGYWMQQALVQARLAWGEGEVPVGAVVVRGNEIVGVGYNAPIGTHDPSAHAEMRALRQ 71

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
               L    LPE +++VTLEPC MCA A+  AR+ R+ YGA +PK G   +    +    
Sbjct: 72  AAVTLGNYRLPECEVFVTLEPCVMCAGAMLHARVARVVYGAPDPKTGAAGSVLDLFAETR 131

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H   I   +  Q    +++ FF ERR
Sbjct: 132 LNHQTAILGSVLAQECGDMLRAFFAERR 159


>gi|161869845|ref|YP_001599014.1| cytidine and deoxycytidylate deaminase family protein [Neisseria
           meningitidis 053442]
 gi|161595398|gb|ABX73058.1| cytidine and deoxycytidylate deaminase family protein [Neisseria
           meningitidis 053442]
          Length = 239

 Score = 96.3 bits (238), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 56/143 (39%), Positives = 80/143 (55%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  AL +A+ +A   EIPVGAV V + KII+ A N      +V+ HAEI A+    R +
Sbjct: 95  FMREALRQAEQSAADGEIPVGAVIVSDGKIIASAHNTCIADCNVSRHAEINALAQAGREI 154

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L   D+Y+TLEPC MCA+A+  ARIRR+ YGA+ PK G   +    +     +   
Sbjct: 155 QNYRLDGCDIYITLEPCAMCASALIQARIRRVIYGAAEPKTGAAGSIVNLFADKRLNTHT 214

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
            I  GI ++  R ++  FF+ +R
Sbjct: 215 AIRGGILQEECRAVLSRFFQNKR 237


>gi|300865868|ref|ZP_07110611.1| tRNA-adenosine deaminase [Oscillatoria sp. PCC 6506]
 gi|300336131|emb|CBN55769.1| tRNA-adenosine deaminase [Oscillatoria sp. PCC 6506]
          Length = 169

 Score = 96.3 bits (238), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 60/144 (41%), Positives = 76/144 (52%), Gaps = 1/144 (0%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNN-KIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           +MS A++ AQ A    E+PVGA  V +  K+I++  NR     D TAHAEILA+R     
Sbjct: 21  WMSRAIKLAQEAGEAGEVPVGAAIVDSQGKLIAQGQNRRERDCDPTAHAEILALRGAGIA 80

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           L    L    LYVTLEPC MCA AI  ARI  L YG  +PK G I            +H 
Sbjct: 81  LQNWHLNACTLYVTLEPCPMCAGAIVQARIGLLVYGVDDPKSGTIRTVGNIPDSDCSYHR 140

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
             +  GI E   R+ +Q +F +RR
Sbjct: 141 LPVLGGIMESECREQLQSWFAKRR 164


>gi|261252226|ref|ZP_05944799.1| tRNA-specific adenosine-34 deaminase [Vibrio orientalis CIP 102891]
 gi|260935617|gb|EEX91606.1| tRNA-specific adenosine-34 deaminase [Vibrio orientalis CIP 102891]
          Length = 178

 Score = 96.3 bits (238), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 51/139 (36%), Positives = 75/139 (53%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  A+E A +A  + E+PVGAV V + +II+   N +    D TAHAE+  IR    +L
Sbjct: 13  FMRRAMELAAHAETQGEVPVGAVLVKDGEIIAEGWNESIGQHDATAHAEMQTIRKAGEVL 72

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  LYVTLEPC MCA A+  +R++R+ +GA + K G        +     +H  
Sbjct: 73  ENYRLLDTTLYVTLEPCPMCAGALLHSRVKRIVFGAPDLKAGAAGTVLNLFEHQAAYHYA 132

Query: 127 EIYPGISEQRSRQIIQDFF 145
           ++  G+ E   R  +Q FF
Sbjct: 133 DVEKGLLEDECRVQLQAFF 151


>gi|149375103|ref|ZP_01892875.1| cytidine/deoxycytidylate deaminase family protein [Marinobacter
           algicola DG893]
 gi|149360467|gb|EDM48919.1| cytidine/deoxycytidylate deaminase family protein [Marinobacter
           algicola DG893]
          Length = 166

 Score = 96.3 bits (238), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 57/139 (41%), Positives = 72/139 (51%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +MS AL+ A  A    E+PVGAV VL+ K I    N      D TAHAEI A+R     +
Sbjct: 10  WMSRALQLAGQAGAAGEVPVGAVVVLDGKEIGTGFNAPISGCDPTAHAEIRALRDAAARV 69

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               LP   LYVTLEPCTMC  AI  +RI RL YGA+ PK G + +  Q       +   
Sbjct: 70  GNYRLPGATLYVTLEPCTMCVGAIVHSRISRLVYGAAEPKAGAVASARQTLNEPHLNWRV 129

Query: 127 EIYPGISEQRSRQIIQDFF 145
           E   G+   +   +I +FF
Sbjct: 130 ESVGGVLADQCSHVISEFF 148


>gi|282891324|ref|ZP_06299826.1| hypothetical protein pah_c050o112 [Parachlamydia acanthamoebae str.
           Hall's coccus]
 gi|281498821|gb|EFB41138.1| hypothetical protein pah_c050o112 [Parachlamydia acanthamoebae str.
           Hall's coccus]
          Length = 176

 Score = 96.3 bits (238), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 57/145 (39%), Positives = 81/145 (55%), Gaps = 4/145 (2%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  AL++A  A    E+PVGA+ V   KII+R  N+   L+D TAHAE+L I  G   L
Sbjct: 17  FMLEALKQAWKAFQAKEVPVGAILVHEGKIIARGYNQVELLRDATAHAEVLCITAGEAAL 76

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH--H 124
           S   L +  LY T+EPC MCA A+ L+R+  L +GA + + G   NG+    L   H  H
Sbjct: 77  SNWRLSQCKLYCTIEPCAMCAGAMLLSRVEELIWGAPDIRHGA--NGSWVNLLNIPHPTH 134

Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149
             ++  GI +     +++ FF+ RR
Sbjct: 135 QIKVKSGILKDPCALLMKQFFQIRR 159


>gi|298491580|ref|YP_003721757.1| CMP/dCMP deaminase zinc-binding protein ['Nostoc azollae' 0708]
 gi|298233498|gb|ADI64634.1| CMP/dCMP deaminase zinc-binding protein ['Nostoc azollae' 0708]
          Length = 165

 Score = 96.3 bits (238), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 58/148 (39%), Positives = 76/148 (51%), Gaps = 1/148 (0%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           K   +M+ ALE AQ A    E+PVGAV V   + +I+   NR    +D T HAEI+AIR 
Sbjct: 16  KHQKWMNHALELAQVAGDAGEVPVGAVIVDAADNLIATGENRKERDQDPTGHAEIMAIRA 75

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
             + L    L +  LYVTLEPC MCA AI  AR+  L YG  + K G I           
Sbjct: 76  ASQSLQNWRLDKYTLYVTLEPCPMCAGAIVHARLATLVYGVDDTKTGAIRTVINIPNSPA 135

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H  ++  GI E   R  +Q +F  +R
Sbjct: 136 SNHPLQVVGGILESACRHQLQTWFTTKR 163


>gi|254442522|ref|ZP_05055998.1| Cytidine and deoxycytidylate deaminase zinc-binding region domain
           protein [Verrucomicrobiae bacterium DG1235]
 gi|198256830|gb|EDY81138.1| Cytidine and deoxycytidylate deaminase zinc-binding region domain
           protein [Verrucomicrobiae bacterium DG1235]
          Length = 177

 Score = 96.3 bits (238), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 50/143 (34%), Positives = 76/143 (53%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  A  +A  A   NE+P+GAV     +++  A NR     D TAHAE+LAI      +
Sbjct: 28  YMELAYNQAIEAWRENEVPIGAVIEYKGEVVGSAHNRVESTNDPTAHAEMLAITQASSAI 87

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L E  LYVT EPC MC+ A  ++R++R+ Y   +PK GG+       +  T +HS 
Sbjct: 88  KNWRLNEATLYVTKEPCPMCSGASMMSRLKRVVYAVPDPKMGGLGGLYDVNSYPTINHSL 147

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+  G+      +++Q FF+ +R
Sbjct: 148 EVEIGVLRDDCLELLQAFFQLKR 170


>gi|53802428|ref|YP_112823.1| zinc-binding domain-containing protein [Methylococcus capsulatus
           str. Bath]
 gi|53756189|gb|AAU90480.1| zinc-binding domain protein [Methylococcus capsulatus str. Bath]
          Length = 137

 Score = 96.3 bits (238), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 51/135 (37%), Positives = 75/135 (55%)

Query: 15  AQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEV 74
           A+ A    E+P+GAV V N +I+    N+     D TAHAEI+A+R     L    L + 
Sbjct: 3   ARTAETAGEVPIGAVLVKNGEILGEGHNQPISTHDPTAHAEIVALRAAGARLGNYRLVDT 62

Query: 75  DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISE 134
            LYVTLEPC MC  AI  AR+ RL +GA++P+ G   +  +       +H  E+  G+  
Sbjct: 63  TLYVTLEPCAMCMGAILHARVGRLVFGAADPRRGAAISALRLNEAEFMNHRVELLEGVLA 122

Query: 135 QRSRQIIQDFFKERR 149
           +   Q+++DFF+ RR
Sbjct: 123 EECSQLLRDFFRNRR 137


>gi|330959126|gb|EGH59386.1| cytidine/deoxycytidylate deaminase, zinc-binding region
           [Pseudomonas syringae pv. maculicola str. ES4326]
          Length = 169

 Score = 96.3 bits (238), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 51/127 (40%), Positives = 73/127 (57%)

Query: 23  EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEP 82
           E+PVGAV V + +II R  N      D +AHAE++AIR   + L    LP   LYVTLEP
Sbjct: 31  EVPVGAVLVQHGEIIGRGYNCPISGSDPSAHAEMMAIRDAAKALDNYRLPGSTLYVTLEP 90

Query: 83  CTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQ 142
           C+MCA  I  +R+ R+ YGA  PK G +E+  QF++    +H      G+  +    ++ 
Sbjct: 91  CSMCAGLIVHSRVARVVYGALEPKAGIVESQGQFFSQGFLNHRVLFEGGVLGEECGAMLS 150

Query: 143 DFFKERR 149
           +FF+ RR
Sbjct: 151 EFFRMRR 157


>gi|327438138|dbj|BAK14503.1| cytosine/adenosine deaminase [Solibacillus silvestris StLB046]
          Length = 167

 Score = 96.3 bits (238), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 50/127 (39%), Positives = 73/127 (57%)

Query: 23  EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEP 82
           E+P+GAV V  ++II+RA N     ++   HAE +AI+  C+ +    L E  LYVTLEP
Sbjct: 25  EVPIGAVIVYKDEIIARAHNLRETTQNALTHAESMAIQEACKKVGSWRLEETTLYVTLEP 84

Query: 83  CTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQ 142
           C MCA AI  +RI R+ YGA + K G +++  +    A  +H   +  G+  +   QI+ 
Sbjct: 85  CPMCAGAILQSRIPRVVYGARDIKAGCVDSLYRLLNDARFNHECTVTEGVMAEECGQILT 144

Query: 143 DFFKERR 149
           DFFK  R
Sbjct: 145 DFFKALR 151


>gi|88799915|ref|ZP_01115487.1| hypothetical protein MED297_15045 [Reinekea sp. MED297]
 gi|88777346|gb|EAR08549.1| hypothetical protein MED297_15045 [Reinekea sp. MED297]
          Length = 162

 Score = 96.3 bits (238), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 52/143 (36%), Positives = 77/143 (53%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  AL++A+ A    E+P+GAV    ++II    N+     D +AHAE+LAIR   + +
Sbjct: 8   YMRAALQQAEQAYRAGEVPIGAVVTYQDRIIGEGYNQTITQLDPSAHAEMLAIRAAAQAI 67

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L    LYVT+EPCTMC   +  +RI  L +GA  PK G I + +  +  A  +H  
Sbjct: 68  GNYRLVGCTLYVTIEPCTMCVGLLVHSRIDCLVFGAPEPKAGAIRSASCVHEQAHFNHEF 127

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           EI  G+  +     +  FF+ERR
Sbjct: 128 EIRSGVLAEDCSGTMSRFFRERR 150


>gi|198274233|ref|ZP_03206765.1| hypothetical protein BACPLE_00373 [Bacteroides plebeius DSM 17135]
 gi|198272908|gb|EDY97177.1| hypothetical protein BACPLE_00373 [Bacteroides plebeius DSM 17135]
          Length = 144

 Score = 96.3 bits (238), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 58/149 (38%), Positives = 83/149 (55%), Gaps = 5/149 (3%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M   + +M  AL EA  AA R E+PVGAV V  ++I++RA N    L DVTAHAE+ A+ 
Sbjct: 1   MADDSFYMKQALAEAARAAERGEVPVGAVVVCRDRILARAHNLTETLHDVTAHAEMQALT 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
                L  + L +  LYVT+EPC MCA AI+ +++ RL +GA + K      G Q Y   
Sbjct: 61  AAANSLGAKYLTDCTLYVTVEPCVMCAGAIAWSQVGRLVFGAEDEK-----RGYQRYAPQ 115

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             H    +  G+       +++DFF++RR
Sbjct: 116 ALHPKTVVVKGVLADECAGLMKDFFRKRR 144


>gi|317473697|ref|ZP_07932984.1| cytidine and deoxycytidylate deaminase zinc-binding protein
           [Anaerostipes sp. 3_2_56FAA]
 gi|316898818|gb|EFV20845.1| cytidine and deoxycytidylate deaminase zinc-binding protein
           [Anaerostipes sp. 3_2_56FAA]
          Length = 152

 Score = 96.3 bits (238), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 57/149 (38%), Positives = 82/149 (55%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M +   FM  A+++A+ AA   ++P+G V VL+ KII+RA N+  + K   AHAE+LAI 
Sbjct: 1   MNENEKFMKEAIKQAKKAAAIGDVPIGCVIVLDGKIIARAYNQRNKRKTTLAHAELLAIE 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              +      L E  +Y+TLEPC MCA AI  ARI ++  GA NPK G   +        
Sbjct: 61  KASKKTGDWRLEECTMYITLEPCQMCAGAIVQARIPKVVIGAMNPKAGCAGSILNILQRE 120

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  EI  G+  +    ++ DFF+E R
Sbjct: 121 EFNHQAEIESGVLREECSHMMSDFFRELR 149


>gi|170702297|ref|ZP_02893195.1| CMP/dCMP deaminase zinc-binding [Burkholderia ambifaria IOP40-10]
 gi|170132806|gb|EDT01236.1| CMP/dCMP deaminase zinc-binding [Burkholderia ambifaria IOP40-10]
          Length = 193

 Score = 96.3 bits (238), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 50/126 (39%), Positives = 71/126 (56%)

Query: 24  IPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83
           +PVGAV V  +++I+R  N      D +AHAE+ A+RM  + L    +P  +LYVTLEPC
Sbjct: 51  VPVGAVLVCGDEVIARGFNHPIGGHDPSAHAEMAALRMAAQHLQNYRMPGCELYVTLEPC 110

Query: 84  TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQD 143
            MCA AI  ARI R+ YGA++PK G   +    +     +H  E+  G+        ++ 
Sbjct: 111 LMCAGAIMHARIARVVYGAADPKTGACGSVIDAFANPQLNHHTEVTGGVLADECGAALKS 170

Query: 144 FFKERR 149
           FF ERR
Sbjct: 171 FFAERR 176


>gi|149278271|ref|ZP_01884409.1| putative cytosine/adenosine deaminase [Pedobacter sp. BAL39]
 gi|149231037|gb|EDM36418.1| putative cytosine/adenosine deaminase [Pedobacter sp. BAL39]
          Length = 157

 Score = 96.3 bits (238), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 50/143 (34%), Positives = 74/143 (51%), Gaps = 5/143 (3%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  ALEEA  A +  E+P+GA+ V   +I+ R  N   +L DVTAHAE+ A     + L
Sbjct: 19  YMRLALEEANKAYVAEEVPIGAIVVCKGRIVGRGYNLTEQLNDVTAHAEMQAFTAAAQTL 78

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
             + L +  +YVT+EPC MCA A    ++ RL YGA+ PK G    G +       H   
Sbjct: 79  GGKYLKDCTIYVTVEPCVMCAGASYWMQVGRLVYGATEPKRGFTSRGAKL-----LHPKT 133

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
            +  G+  +    ++  FF  +R
Sbjct: 134 ILKAGVLAEECGALMTRFFANKR 156


>gi|269216548|ref|ZP_06160402.1| tRNA-specific adenosine deaminase [Slackia exigua ATCC 700122]
 gi|269130077|gb|EEZ61159.1| tRNA-specific adenosine deaminase [Slackia exigua ATCC 700122]
          Length = 212

 Score = 96.3 bits (238), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 51/149 (34%), Positives = 80/149 (53%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           ++K   FM  A  EA+ A    E+P+GAV V + ++++RA NR    +D + HAE  A+R
Sbjct: 54  IEKDESFMREAYAEARRAFEEGEVPIGAVVVCDGRVVARAHNRREADRDPSGHAEFSAMR 113

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              + L +  L    +YVT+EPC MCA  +  ARI R  +GA +PK G + +    +   
Sbjct: 114 AAAQALGRWRLSGCTVYVTVEPCIMCAGLMHQARIDRCVWGAPDPKAGALGSLYAIHADE 173

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  E   G+   +   +++DFF  RR
Sbjct: 174 RLNHRFESTGGVWATQCGSLMRDFFACRR 202


>gi|225376320|ref|ZP_03753541.1| hypothetical protein ROSEINA2194_01960 [Roseburia inulinivorans DSM
           16841]
 gi|225211696|gb|EEG94050.1| hypothetical protein ROSEINA2194_01960 [Roseburia inulinivorans DSM
           16841]
          Length = 166

 Score = 96.3 bits (238), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 49/145 (33%), Positives = 76/145 (52%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M +   +M  A+ EA+ A   +E+P+G V V +  II+R  NR     +  AHAE+ AI+
Sbjct: 3   MTQDEKYMKAAIREAKKAYALDEVPIGCVIVQDGTIIARGYNRRNTEGNTLAHAELTAIK 62

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              +      L +  +YVTLEPC MCA AI  +R++++     NPK G   +      +A
Sbjct: 63  KASKKTGDWRLEDCTMYVTLEPCQMCAGAIVQSRMKKVVIATMNPKAGCAGSVLNLLQMA 122

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFF 145
             +H  EI  G+ E+    ++ DFF
Sbjct: 123 AFNHQVEIEKGVLEEECSMMLSDFF 147


>gi|297838639|ref|XP_002887201.1| cytidine/deoxycytidylate deaminase family protein [Arabidopsis lyrata
            subsp. lyrata]
 gi|297333042|gb|EFH63460.1| cytidine/deoxycytidylate deaminase family protein [Arabidopsis lyrata
            subsp. lyrata]
          Length = 1135

 Score = 96.3 bits (238), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 67/162 (41%), Positives = 84/162 (51%), Gaps = 20/162 (12%)

Query: 6    VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
            +FM  AL EA+ AA   E+PVGAV V + KII+R  N   EL+D TAHAE++ IR G + 
Sbjct: 941  IFMREALVEAKKAADTWEVPVGAVLVHDGKIIARGYNLVEELRDSTAHAEMICIREGSKA 1000

Query: 66   LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASN-------------PKGGGIEN 112
            L    L +  LYVTLEPC MCA AI  AR+  L +GA N             P G G  N
Sbjct: 1001 LRSWRLADTTLYVTLEPCPMCAGAILQARVNTLVWGAPNKLLGADGSWIRLFPGGEG--N 1058

Query: 113  GTQFYTLATCHHSPE-----IYPGISEQRSRQIIQDFFKERR 149
            G++          P      I  G+ E    Q +Q FF+ RR
Sbjct: 1059 GSEVSEKPPPPVHPFHPKMTIRRGVLESECAQTMQQFFQLRR 1100


>gi|139473043|ref|YP_001127758.1| deaminase [Streptococcus pyogenes str. Manfredo]
 gi|134271289|emb|CAM29505.1| putative deaminase [Streptococcus pyogenes str. Manfredo]
          Length = 157

 Score = 96.3 bits (238), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 55/149 (36%), Positives = 80/149 (53%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +++   FM  AL+EA+ +  + EIP+G V V + +II R  N   E      HAEI+AI 
Sbjct: 5   LEEQTYFMQEALKEAEKSLQKAEIPIGCVIVKDGEIIGRGHNAREESNQAIMHAEIMAIN 64

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
                     L +  L+VT+EPC MC+ AI LARI  + YGASN K GG ++  Q  T  
Sbjct: 65  EANAHEGNWRLLDTTLFVTIEPCVMCSGAIGLARIPHVIYGASNQKFGGADSLYQILTDE 124

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  ++  G+       I+Q FF++ R
Sbjct: 125 RLNHRVQVERGLLAADCANIMQTFFRQGR 153


>gi|295094398|emb|CBK83489.1| Cytosine/adenosine deaminases [Coprococcus sp. ART55/1]
          Length = 169

 Score = 96.3 bits (238), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 50/143 (34%), Positives = 77/143 (53%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  A+ +A+ A    ++P+G V V +++II+R  N+    K   AHAEILAI    + L
Sbjct: 20  YMDKAIAQAKRAYANGDVPIGCVIVHDDRIIARGFNKRNLKKTTLAHAEILAIEQASKKL 79

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L E  +YVTLEPC MCA AI  ARI  +  G  NPK G   +      +   +H  
Sbjct: 80  GDWRLEECTMYVTLEPCQMCAGAIVQARIPNVVIGCMNPKAGCAGSIINLLDMKQFNHQV 139

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+  G+ +    ++++ FF++ R
Sbjct: 140 EVIRGVRQDECSEMMKSFFRDLR 162


>gi|281358294|ref|ZP_06244776.1| CMP/dCMP deaminase zinc-binding [Victivallis vadensis ATCC BAA-548]
 gi|281315121|gb|EFA99152.1| CMP/dCMP deaminase zinc-binding [Victivallis vadensis ATCC BAA-548]
          Length = 434

 Score = 95.9 bits (237), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 50/143 (34%), Positives = 80/143 (55%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  AL+EA+NAA   E+PVGAVAV + ++++ A NR  E     +HAEI  +     + 
Sbjct: 8   FMRLALDEARNAAAAGEVPVGAVAVRDGRVLATARNRVEERHSAVSHAEIELLHAVEAVT 67

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               + E+  Y+T EPC MCA A+  AR  R+ +G ++P+ GG  +             P
Sbjct: 68  GDWRMDEITFYITKEPCPMCAGALVNARAGRIVFGLADPRMGGCGSALDITGHPGVLWHP 127

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+  G+  + +++II++FF+  R
Sbjct: 128 EVEGGVLAEEAQRIIREFFRNSR 150


>gi|225849713|ref|YP_002729947.1| tRNA-specific adenosine deaminase [Persephonella marina EX-H1]
 gi|225645628|gb|ACO03814.1| tRNA-specific adenosine deaminase [Persephonella marina EX-H1]
          Length = 154

 Score = 95.9 bits (237), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 51/143 (35%), Positives = 81/143 (56%), Gaps = 1/143 (0%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           F+  A EEA  A  ++E+P+GAV V + +II +  N+  E  +   HAEI+AI   CR  
Sbjct: 7   FLDIAYEEALKAYEKDEVPIGAVIVKDGEIIGKGHNQRIEKNNALYHAEIVAIEEACRNT 66

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L    LYVT+EPC MCA AI  +RI+++ +GA + KGG + +  + +         
Sbjct: 67  GSWRLDGCTLYVTVEPCVMCAGAIMQSRIKKVVFGALDQKGGAVVSKYRLFDDGKLPFKV 126

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           + Y  I+ +++  I++DFF  +R
Sbjct: 127 D-YSLINYEKASIILKDFFLNKR 148


>gi|225423812|ref|XP_002277950.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 1358

 Score = 95.9 bits (237), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 55/103 (53%), Positives = 65/103 (63%)

Query: 2    KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
            K   +FM  AL EA+ AA   E+PVGAV V + KII+R  NR  EL+D TAHAE++ IR 
Sbjct: 1155 KIDEMFMREALLEAKKAANAWEVPVGAVLVQHGKIIARGCNRVEELRDSTAHAEMICIRE 1214

Query: 62   GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASN 104
               +L    L E  LYVTLEPC MCA AI  ARI  L +GA N
Sbjct: 1215 ASNLLRTWRLSETTLYVTLEPCPMCAGAILQARIDTLVWGAPN 1257


>gi|282854964|ref|ZP_06264298.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Propionibacterium acnes J139]
 gi|282582110|gb|EFB87493.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Propionibacterium acnes J139]
 gi|314922049|gb|EFS85880.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Propionibacterium acnes HL001PA1]
 gi|314965899|gb|EFT09998.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Propionibacterium acnes HL082PA2]
 gi|314980659|gb|EFT24753.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Propionibacterium acnes HL110PA3]
 gi|315090999|gb|EFT62975.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Propionibacterium acnes HL110PA4]
 gi|315095126|gb|EFT67102.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Propionibacterium acnes HL060PA1]
 gi|315105358|gb|EFT77334.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Propionibacterium acnes HL050PA2]
 gi|327328755|gb|EGE70515.1| tRNA-specific adenosine deaminase [Propionibacterium acnes
           HL103PA1]
          Length = 156

 Score = 95.9 bits (237), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 52/143 (36%), Positives = 78/143 (54%), Gaps = 1/143 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M+ AL+ A+ AA   ++P+GAV +  + +++S AGN      D TAHAE+LAIR      
Sbjct: 8   MTQALDVARRAATWGDVPIGAVILGADGEVLSEAGNERERTGDPTAHAEVLAIRRAAEAR 67

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  L VTLEPCTMCA  I  ARI R+ +GA + K G + +           H P
Sbjct: 68  DGWRLGDCTLVVTLEPCTMCAGTIVAARIPRVVFGAFDSKAGAVSSLFDVMRDPRLPHRP 127

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           ++  G+  + S  ++++FF   R
Sbjct: 128 KVVTGVMAEESSALLREFFDGHR 150


>gi|304319888|ref|YP_003853531.1| cytidine and deoxycytidylate deaminase family protein [Parvularcula
           bermudensis HTCC2503]
 gi|303298791|gb|ADM08390.1| cytidine and deoxycytidylate deaminase family protein [Parvularcula
           bermudensis HTCC2503]
          Length = 172

 Score = 95.9 bits (237), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 60/144 (41%), Positives = 76/144 (52%), Gaps = 1/144 (0%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           +M  AL  A  AA   E+PVGAV +    ++I+ A N      D TAHAE+  +R G   
Sbjct: 16  WMDHALGLASMAARNGEVPVGAVLLSATGQLIAEAVNTPIAQCDPTAHAELAVLRKGALA 75

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
                L    L VTLEPC MCA AI  ARI  L YGA +PKGG + +G   +   T HH 
Sbjct: 76  TGNYRLTGTTLLVTLEPCAMCAGAICHARIGHLVYGADDPKGGAVRHGATLFDQVTTHHR 135

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
           P +  GI    S  +++ FF ERR
Sbjct: 136 PRVTAGIRADESAALLRSFFAERR 159


>gi|282856349|ref|ZP_06265628.1| cytidine and deoxycytidylate deaminase family protein
           [Pyramidobacter piscolens W5455]
 gi|282585720|gb|EFB91009.1| cytidine and deoxycytidylate deaminase family protein
           [Pyramidobacter piscolens W5455]
          Length = 166

 Score = 95.9 bits (237), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 62/144 (43%), Positives = 80/144 (55%), Gaps = 1/144 (0%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           +M+ ALE    AA   +IPVGA+ V    +II R  NR R   D TAHAE++A+R   R 
Sbjct: 8   YMNLALELGLQAAREGDIPVGALVVDPCGEIIGRGRNRRRIEHDPTAHAEVVALREAARN 67

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           L    L    LYVTLEPC MCA A+  AR+ RL YG ++PK G               H 
Sbjct: 68  LGVWNLNGCSLYVTLEPCPMCAGALVQARVSRLVYGCTDPKAGACGTLYDLTRDTRLFHR 127

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
            ++ PG+ EQ  R ++QDFF+E R
Sbjct: 128 LQVVPGVMEQECRALLQDFFRECR 151


>gi|297581254|ref|ZP_06943178.1| zinc-binding domain-containing protein [Vibrio cholerae RC385]
 gi|297534570|gb|EFH73407.1| zinc-binding domain-containing protein [Vibrio cholerae RC385]
          Length = 193

 Score = 95.9 bits (237), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 50/129 (38%), Positives = 72/129 (55%)

Query: 21  RNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80
           + E+PVGAV V + +II+   N +    D TAHAEI  IR   + LS   L +  LYVTL
Sbjct: 45  QGEVPVGAVLVRDGEIIAEGWNGSITNHDATAHAEIEVIRKAGKALSNYRLLDTTLYVTL 104

Query: 81  EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140
           EPC MCA A+  +R++R+ YGA + K G        ++    +H   +  G+ E+  R  
Sbjct: 105 EPCPMCAGALLHSRVKRIVYGAPDLKAGAAGTVMDLFSSQAAYHYATVEKGLLEEECRAQ 164

Query: 141 IQDFFKERR 149
           +Q FF+ RR
Sbjct: 165 LQAFFQRRR 173


>gi|207723447|ref|YP_002253846.1| cytosine/adenosine deaminase protein [Ralstonia solanacearum MolK2]
 gi|206588648|emb|CAQ35611.1| cytosine/adenosine deaminase protein [Ralstonia solanacearum MolK2]
          Length = 194

 Score = 95.9 bits (237), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 53/148 (35%), Positives = 78/148 (52%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           ++   +M  AL +A+ A    E+PVGAV V  N+I+    N      D +AHAE+ A+R 
Sbjct: 28  ERDGYWMQQALVQARLAWGEGEVPVGAVVVRGNEIVGVGYNAPIGTHDPSAHAEMRALRQ 87

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
               L    LPE +++VTLEPC MCA A+  AR+ R+ YGA +PK G   +    +    
Sbjct: 88  AAVTLGNYRLPECEVFVTLEPCVMCAGAMLHARVARVVYGAPDPKTGAAGSVLDLFAETR 147

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H   I   +  Q    +++ FF ERR
Sbjct: 148 LNHQTAILGSVLAQECGDMLRAFFAERR 175


>gi|227891209|ref|ZP_04009014.1| nucleoside deaminase [Lactobacillus salivarius ATCC 11741]
 gi|227867083|gb|EEJ74504.1| nucleoside deaminase [Lactobacillus salivarius ATCC 11741]
          Length = 169

 Score = 95.9 bits (237), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 54/139 (38%), Positives = 75/139 (53%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  AL EA+ AA   E+P+G V V + KII R  N     ++ T HAE+LAI      +
Sbjct: 14  FMKEALFEAKLAAKIGEVPIGCVIVKDGKIIGRGHNLREHSQNATLHAEMLAIEEANETV 73

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
           +   L +  L+VTLEPC MC+ AI  +RI  +YYGAS+ K G +         +  +H  
Sbjct: 74  NSWRLVDTQLFVTLEPCPMCSGAIINSRIPEVYYGASDSKAGTVGTLMNLLEDSRFNHQS 133

Query: 127 EIYPGISEQRSRQIIQDFF 145
            +  GI E     I++DFF
Sbjct: 134 FVEKGILENECASILKDFF 152


>gi|283131444|dbj|BAI63444.1| tRNA-specific adenosine deaminase [Streptococcus dysgalactiae
           subsp. equisimilis]
          Length = 183

 Score = 95.9 bits (237), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 53/149 (35%), Positives = 81/149 (54%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +++   FM  AL+EA+ +  + EIP+G V V + +II R  N   E      HAE++AI 
Sbjct: 13  LEEQTYFMQEALKEAEKSLQKAEIPIGCVIVKDGEIIGRGHNAREESNQAIMHAEMMAIN 72

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
                     L +  ++VT+EPC MC+ AI LARI  + YGASN K GG ++  Q  T  
Sbjct: 73  EANAHEGNWRLLDTTMFVTIEPCVMCSGAIGLARIPHVIYGASNQKFGGTDSLYQILTDE 132

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  ++  G+  +    I+Q FF++ R
Sbjct: 133 RLNHRVQVERGLLAEDCANIMQTFFRQGR 161


>gi|212550942|ref|YP_002309259.1| cytosine/adenosine deaminase [Candidatus Azobacteroides
           pseudotrichonymphae genomovar. CFP2]
 gi|212549180|dbj|BAG83848.1| putative cytosine/adenosine deaminase [Candidatus Azobacteroides
           pseudotrichonymphae genomovar. CFP2]
          Length = 146

 Score = 95.9 bits (237), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 54/149 (36%), Positives = 82/149 (55%), Gaps = 5/149 (3%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +++   +M  AL EAQ A  + E+P+GAV V + +II+R+ N    L D TAHAE+ AI 
Sbjct: 2   LQEDEYYMKQALLEAQKAFEKAEVPIGAVIVSDKRIIARSHNLTETLNDTTAHAEMQAIT 61

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
                L  + L    LYVT+EPC MCA A++ A+I+R+ YG  + K      G    T  
Sbjct: 62  AASIALGGKYLTNCVLYVTVEPCPMCAGALAWAQIKRIVYGIKDEK-----RGYHKITPF 116

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             H   ++   I  + S  +++ FFK++R
Sbjct: 117 ILHPKTKVTSKILAEESGFLMKKFFKDKR 145


>gi|157376253|ref|YP_001474853.1| cytidine/deoxycytidylate deaminase family protein [Shewanella
           sediminis HAW-EB3]
 gi|157318627|gb|ABV37725.1| cytidine/deoxycytidylate deaminase family protein [Shewanella
           sediminis HAW-EB3]
          Length = 177

 Score = 95.9 bits (237), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 51/143 (35%), Positives = 78/143 (54%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM+ A+ +A  A  R E+PVGAV V ++K+++   N      D +AHAE+  +R   R++
Sbjct: 10  FMALAMLQAAEAEARGEVPVGAVLVKDDKVVAVGSNDCIGQHDPSAHAEMQCLREAGRLV 69

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  LYVTLEPC MCA A+  +R+ RL +GA + K G   +          +H  
Sbjct: 70  ENYRLLDTTLYVTLEPCAMCAGAMVHSRVSRLVFGAKDEKTGAAGSVVDLVRHPRFNHQL 129

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+  G+ EQ   + +  FF+ RR
Sbjct: 130 EVNNGVLEQECSEQLSQFFRRRR 152


>gi|300724136|ref|YP_003713453.1| TadA, tRNA -specific adenosine deaminase [Xenorhabdus nematophila
           ATCC 19061]
 gi|297630670|emb|CBJ91335.1| TadA, tRNA-specific adenosine deaminase [Xenorhabdus nematophila
           ATCC 19061]
          Length = 170

 Score = 95.9 bits (237), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 53/127 (41%), Positives = 71/127 (55%)

Query: 23  EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEP 82
           EIPVGA+ V +N+I++   N      D TAHAEI+A+R G   L    L    LYVTLEP
Sbjct: 32  EIPVGAILVADNEILAEGFNLPITYHDPTAHAEIIALRQGGSRLQNYRLLNTTLYVTLEP 91

Query: 83  CTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQ 142
           C MCA A+  +RI+RL YGAS+ K G   +          +H  EI  G+  +    ++ 
Sbjct: 92  CVMCAGAMVHSRIKRLVYGASDMKTGAAGSLIDILRHPGMNHQIEIIGGVLAEECSTMLS 151

Query: 143 DFFKERR 149
            FFK+RR
Sbjct: 152 SFFKQRR 158


>gi|308066929|ref|YP_003868534.1| hypothetical protein PPE_00098 [Paenibacillus polymyxa E681]
 gi|305856208|gb|ADM67996.1| Conserved hypothetical protein [Paenibacillus polymyxa E681]
          Length = 163

 Score = 95.9 bits (237), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 53/143 (37%), Positives = 75/143 (52%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  A++EA  A    E+P+GAV V +N+II R  N      D TAHAE++AIR     L
Sbjct: 6   WMKEAIQEAYKAEALGEVPIGAVIVKDNEIIGRGYNLRETDADPTAHAEMVAIRQASEHL 65

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  LYVTLEPC MCA AI  +R+  L YG ++PK G              +H  
Sbjct: 66  GAWRLLDCRLYVTLEPCPMCAGAIVQSRVPHLIYGTTDPKAGCAGTLMNLLQEPRFNHCT 125

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+  G+ ++    ++  FF+  R
Sbjct: 126 EVNSGVLQEECASLLTSFFRNLR 148


>gi|229513031|ref|ZP_04402497.1| tRNA-specific adenosine-34 deaminase [Vibrio cholerae TMA 21]
 gi|254285542|ref|ZP_04960506.1| zinc-binding domain protein [Vibrio cholerae AM-19226]
 gi|150424404|gb|EDN16341.1| zinc-binding domain protein [Vibrio cholerae AM-19226]
 gi|229349924|gb|EEO14878.1| tRNA-specific adenosine-34 deaminase [Vibrio cholerae TMA 21]
          Length = 193

 Score = 95.9 bits (237), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 50/129 (38%), Positives = 72/129 (55%)

Query: 21  RNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80
           + E+PVGAV V + +II+   N +    D TAHAEI  IR   + LS   L +  LYVTL
Sbjct: 45  QGEVPVGAVLVRDGEIIAEGWNGSITNHDATAHAEIEVIRKAGKALSNYRLLDTTLYVTL 104

Query: 81  EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140
           EPC MCA A+  +R++R+ YGA + K G        ++    +H   +  G+ E+  R  
Sbjct: 105 EPCPMCAGALLHSRVKRIVYGAPDLKAGAAGTVMDLFSSQAAYHYATVEKGLLEEECRAQ 164

Query: 141 IQDFFKERR 149
           +Q FF+ RR
Sbjct: 165 LQAFFQRRR 173


>gi|229530028|ref|ZP_04419418.1| tRNA-specific adenosine-34 deaminase [Vibrio cholerae 12129(1)]
 gi|229333802|gb|EEN99288.1| tRNA-specific adenosine-34 deaminase [Vibrio cholerae 12129(1)]
          Length = 193

 Score = 95.9 bits (237), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 50/129 (38%), Positives = 72/129 (55%)

Query: 21  RNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80
           + E+PVGAV V + +II+   N +    D TAHAEI  IR   + LS   L +  LYVTL
Sbjct: 45  QGEVPVGAVLVRDGEIIAEGWNGSITNHDATAHAEIEVIRKAGKALSNYRLLDTTLYVTL 104

Query: 81  EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140
           EPC MCA A+  +R++R+ YGA + K G        ++    +H   +  G+ E+  R  
Sbjct: 105 EPCPMCAGALLHSRVKRIVYGAPDLKAGAAGTVLDLFSSQAAYHYATVEKGLLEEECRAQ 164

Query: 141 IQDFFKERR 149
           +Q FF+ RR
Sbjct: 165 LQAFFQRRR 173


>gi|23097481|ref|NP_690947.1| hypothetical protein OB0026 [Oceanobacillus iheyensis HTE831]
 gi|22775704|dbj|BAC11982.1| hypothetical conserved protein [Oceanobacillus iheyensis HTE831]
          Length = 166

 Score = 95.9 bits (237), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 53/149 (35%), Positives = 85/149 (57%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           + +  +FM+ A+ EA+ A + NE+P+GAV V + +I+ +  N    ++    HAE+LA++
Sbjct: 7   VSQDELFMAAAIREARRAWILNEVPIGAVIVHDGEIVGKGFNLRESMQATLTHAELLAMQ 66

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
                +    L +  LYVTLEPC MCA AI  +R++R+ YGA +PK G            
Sbjct: 67  EANNEIGSWRLEDCTLYVTLEPCPMCAGAIVQSRMKRVVYGAPDPKAGCAGTIMNLLNEP 126

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  E+  G+ EQ+   I+++FFKE R
Sbjct: 127 RFNHQVEVTSGVLEQQCSTILKEFFKELR 155


>gi|197302614|ref|ZP_03167668.1| hypothetical protein RUMLAC_01343 [Ruminococcus lactaris ATCC
           29176]
 gi|197298196|gb|EDY32742.1| hypothetical protein RUMLAC_01343 [Ruminococcus lactaris ATCC
           29176]
          Length = 180

 Score = 95.9 bits (237), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 55/143 (38%), Positives = 75/143 (52%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  AL++A+ A    E P+G V V   KII+R  NR    K   AHAEI AI+   + L
Sbjct: 25  YMKEALKQAKKAYALEETPIGCVIVHEGKIIARGYNRRNTDKSPLAHAEISAIKKASKKL 84

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L E  LYVTLEPC MCA AI  +RI R+  G  NPK G   +      +   +H  
Sbjct: 85  GDWRLEECTLYVTLEPCQMCAGAIIQSRIPRVVVGCMNPKAGCAGSVLNLLDVQAFNHQA 144

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+   + E+    +++ FF+E R
Sbjct: 145 EVKTKVLEEECSLMMKQFFRELR 167


>gi|163838825|ref|YP_001623230.1| tRNA-specific adenosine deaminase [Renibacterium salmoninarum ATCC
           33209]
 gi|162952301|gb|ABY21816.1| tRNA-specific adenosine deaminase [Renibacterium salmoninarum ATCC
           33209]
          Length = 161

 Score = 95.9 bits (237), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 52/144 (36%), Positives = 76/144 (52%), Gaps = 1/144 (0%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           +M  AL EAQ A    ++P+GAV +  +  ++    NR     D TAHAE+LA+R     
Sbjct: 16  WMGAALVEAQAALQTEDVPIGAVVLDASGNVVGTGRNRREADGDPTAHAEVLALRAAAEA 75

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
                L    L VTLEPC MCA AI LA++ R+ +GA + K G   +  +       +H 
Sbjct: 76  TGSWRLDGCTLVVTLEPCAMCAGAIVLAKVPRVVFGAWDAKAGAAGSVFEILREPRLNHW 135

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
            E+YPG+ E  S  ++++FF   R
Sbjct: 136 VEVYPGVREAESAILLREFFAGHR 159


>gi|238750377|ref|ZP_04611878.1| tRNA-specific adenosine deaminase [Yersinia rohdei ATCC 43380]
 gi|238711308|gb|EEQ03525.1| tRNA-specific adenosine deaminase [Yersinia rohdei ATCC 43380]
          Length = 195

 Score = 95.9 bits (237), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 51/127 (40%), Positives = 72/127 (56%)

Query: 23  EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEP 82
           E+PVGA+ VL+N++I    NR     D TAHAEI+A+R G + +    L +  LYVTLEP
Sbjct: 51  EVPVGAILVLDNQVIGEGWNRPIRNNDPTAHAEIMALRQGGQAVQNYRLIDATLYVTLEP 110

Query: 83  CTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQ 142
           C MCA A+  +RIRRL YGA++ K G   +          +H  E+  G+  +     + 
Sbjct: 111 CVMCAGAMVHSRIRRLVYGANDLKTGAAGSLLDILRHPGMNHQIEVCAGVLAESCSHQLS 170

Query: 143 DFFKERR 149
            FF+ RR
Sbjct: 171 AFFRLRR 177


>gi|159794935|pdb|2NX8|A Chain A, The Crystal Structure Of The Trna-Specific Adenosine
           Deaminase From Streptococcus Pyogenes
          Length = 179

 Score = 95.9 bits (237), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 53/149 (35%), Positives = 81/149 (54%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +++   FM  AL+E++ +  + EIP+G V V + +II R  N   E      HAE++AI 
Sbjct: 13  LEEQTYFMQEALKESEKSLQKAEIPIGCVIVKDGEIIGRGHNAREESNQAIMHAEMMAIN 72

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
                     L +  L+VT+EPC MC+ AI LARI  + YGASN K GG+++  Q  T  
Sbjct: 73  EANAHEGNWRLLDTTLFVTIEPCVMCSGAIGLARIPHVIYGASNQKFGGVDSLYQILTDE 132

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  ++  G+       I+Q FF++ R
Sbjct: 133 RLNHRVQVERGLLAADCANIMQTFFRQGR 161


>gi|251783385|ref|YP_002997690.1| tRNA-specific adenosine deaminase [Streptococcus dysgalactiae
           subsp. equisimilis GGS_124]
 gi|242392017|dbj|BAH82476.1| tRNA-specific adenosine deaminase [Streptococcus dysgalactiae
           subsp. equisimilis GGS_124]
          Length = 175

 Score = 95.9 bits (237), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 53/143 (37%), Positives = 78/143 (54%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  AL+EA+ +  + EIP+G V V + +II R  N   E      HAE++AI       
Sbjct: 11  FMQEALKEAEKSLQKAEIPIGCVIVKDGEIIGRGHNAREESNQAIMHAEMMAINEANAHE 70

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  ++VT+EPC MC+ AI LARI  + YGASN K GG ++  Q  T    +H  
Sbjct: 71  GNWRLLDTTMFVTIEPCVMCSGAIGLARIPHVIYGASNQKFGGTDSLYQILTDERLNHRV 130

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           ++  G+  +    I+Q FF++ R
Sbjct: 131 QVERGLLAEDCANIMQTFFRQGR 153


>gi|158334188|ref|YP_001515360.1| cytidine/deoxycytidylate deaminase region [Acaryochloris marina
           MBIC11017]
 gi|158304429|gb|ABW26046.1| cytidine/deoxycytidylate deaminase, zinc-binding region
           [Acaryochloris marina MBIC11017]
          Length = 165

 Score = 95.9 bits (237), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 56/144 (38%), Positives = 74/144 (51%), Gaps = 1/144 (0%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           +M  A+  A  A    E+PVGAV +  +   I+   NR     D TAHAEI+A+R   ++
Sbjct: 12  WMEKAIALATQAGAAGEVPVGAVIIGPDGDCIAEGENRRERDHDPTAHAEIVALRAASQV 71

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           +    L E  LYVTLEPC MCA AI  AR+  L YGA +PK G I             H 
Sbjct: 72  IQSWRLHECRLYVTLEPCPMCAGAIIQARLGLLVYGAHDPKTGAIRTVLNLPGSPCSFHK 131

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
             +  G+ E   RQ +Q++F  RR
Sbjct: 132 LPVIAGVLEPTCRQQLQEWFARRR 155


>gi|145219369|ref|YP_001130078.1| tRNA-adenosine deaminase [Prosthecochloris vibrioformis DSM 265]
 gi|145205533|gb|ABP36576.1| tRNA-adenosine deaminase [Chlorobium phaeovibrioides DSM 265]
          Length = 153

 Score = 95.9 bits (237), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 55/144 (38%), Positives = 79/144 (54%), Gaps = 3/144 (2%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNN--KIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M  A  EA  A    E+PVGAV VL+    ++ +  N+   L D TAHAE++A+      
Sbjct: 8   MELAFREALKAFESREVPVGAV-VLDGGGHVVGKGYNQVEALCDATAHAEMIALTSAMAT 66

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           L  + L +  L VT+EPC MCA AI  A++ R+ +GA + K G   +          +H 
Sbjct: 67  LGTKYLQDCTLAVTMEPCPMCAGAIVNAKVGRVVFGAYDAKMGASGSVLNVTGCRPLNHQ 126

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
           PE++ GI E R + ++QDFFKE R
Sbjct: 127 PEVFGGIMEGRCQGLLQDFFKELR 150


>gi|309782085|ref|ZP_07676815.1| tRNA-specific adenosine deaminase [Ralstonia sp. 5_7_47FAA]
 gi|308919151|gb|EFP64818.1| tRNA-specific adenosine deaminase [Ralstonia sp. 5_7_47FAA]
          Length = 182

 Score = 95.5 bits (236), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 52/148 (35%), Positives = 79/148 (53%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           ++   +M  AL +A+ A  + E+PVGAV V  N+I+    N      D +AHAE+ A+R 
Sbjct: 17  ERDGYWMQQALVQAKFAWGQGEVPVGAVVVRGNEIVGVGYNAPIGTHDPSAHAEMRALRQ 76

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
               L    LP+ +++VTLEPC MCA A+  AR+ R+ YGA +PK G   +    +    
Sbjct: 77  AAEKLGNYRLPDCEVFVTLEPCVMCAGAMLHARVARVVYGAPDPKTGAAGSILDLFAETR 136

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H   I   +  Q    +++ FF ERR
Sbjct: 137 LNHQTAITGSVLAQECGDMLRAFFAERR 164


>gi|91788312|ref|YP_549264.1| CMP/dCMP deaminase [Polaromonas sp. JS666]
 gi|91697537|gb|ABE44366.1| CMP/dCMP deaminase, zinc-binding protein [Polaromonas sp. JS666]
          Length = 461

 Score = 95.5 bits (236), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 46/127 (36%), Positives = 75/127 (59%)

Query: 23  EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEP 82
           E+PVGAV V + ++I+   N   +  D TAHAEI+A+R   + L    L E +L+VTLEP
Sbjct: 22  EVPVGAVVVRHGEVIATGRNAPVDANDPTAHAEIVALRAAAQALGNYRLDECELFVTLEP 81

Query: 83  CTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQ 142
           C MC+ A+  AR++R+ +GA++PK G   +    +  +  +H      G+  +   +++Q
Sbjct: 82  CAMCSGAMLHARLQRVVFGATDPKTGAAGSVINLFAESRLNHQTGWQGGVLAEECGELLQ 141

Query: 143 DFFKERR 149
            FF+ RR
Sbjct: 142 AFFRRRR 148


>gi|303258084|ref|ZP_07344092.1| cytidine/deoxycytidylate deaminase family protein [Burkholderiales
           bacterium 1_1_47]
 gi|330998703|ref|ZP_08322432.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Parasutterella excrementihominis YIT 11859]
 gi|302859103|gb|EFL82186.1| cytidine/deoxycytidylate deaminase family protein [Burkholderiales
           bacterium 1_1_47]
 gi|329576442|gb|EGG57954.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Parasutterella excrementihominis YIT 11859]
          Length = 281

 Score = 95.5 bits (236), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 57/144 (39%), Positives = 78/144 (54%), Gaps = 1/144 (0%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           FM  AL EA+ A    E+PVGAV V    KII R  N      D + HAEI+A++   + 
Sbjct: 130 FMREALVEAEKAHQAGEVPVGAVVVDKEGKIIGRGHNLVVAGHDPSGHAEIIALKNASQN 189

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           L    L    +YVTLEPC MC+ AI  AR+ RL YGA + K G  E+  + +     +H 
Sbjct: 190 LKNYRLDNCTIYVTLEPCPMCSGAIIGARLARLVYGAKDQKAGAAESVFKLFDEKRVNHH 249

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
            ++  G+ E+   +I+Q FF E R
Sbjct: 250 TDVTAGVLEEDCLRILQSFFVELR 273


>gi|327483608|gb|AEA78015.1| tRNA-specific adenosine-34 deaminase [Vibrio cholerae LMA3894-4]
          Length = 175

 Score = 95.5 bits (236), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 50/129 (38%), Positives = 72/129 (55%)

Query: 21  RNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80
           + E+PVGAV V + +II+   N +    D TAHAEI  IR   + LS   L +  LYVTL
Sbjct: 27  QGEVPVGAVLVRDGEIIAEGWNGSITNHDATAHAEIEVIRKAGKALSNYRLLDTTLYVTL 86

Query: 81  EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140
           EPC MCA A+  +R++R+ YGA + K G        ++    +H   +  G+ E+  R  
Sbjct: 87  EPCPMCAGALLHSRVKRIVYGAPDLKAGAAGTVLDLFSSQAAYHYATVEKGLLEEECRAQ 146

Query: 141 IQDFFKERR 149
           +Q FF+ RR
Sbjct: 147 LQAFFQRRR 155


>gi|261417404|ref|YP_003251087.1| CMP/dCMP deaminase zinc-binding protein [Fibrobacter succinogenes
           subsp. succinogenes S85]
 gi|261373860|gb|ACX76605.1| CMP/dCMP deaminase zinc-binding protein [Fibrobacter succinogenes
           subsp. succinogenes S85]
          Length = 210

 Score = 95.5 bits (236), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 54/143 (37%), Positives = 75/143 (52%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  AL +AQ A    EIP+G V V +  +I +  N+  +LKD TAHAEI+AI      L
Sbjct: 55  FMRMALRQAQIAFDMKEIPIGCVIVKDGVVIGKGYNQVEQLKDATAHAEIIAIGTAASTL 114

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L    LYVTLEPC MCA AI  +R+ R+ YG+ + + GG        T      + 
Sbjct: 115 DNWRLDGCTLYVTLEPCPMCAGAILNSRVSRIVYGSPDSRFGGCGTTIDVITGNALKRAV 174

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+  GI       +++ FF++ R
Sbjct: 175 EVTGGILADECLGLLKGFFQQMR 197


>gi|229523332|ref|ZP_04412739.1| tRNA-specific adenosine-34 deaminase [Vibrio cholerae TM 11079-80]
 gi|229339695|gb|EEO04710.1| tRNA-specific adenosine-34 deaminase [Vibrio cholerae TM 11079-80]
          Length = 177

 Score = 95.5 bits (236), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 50/129 (38%), Positives = 72/129 (55%)

Query: 21  RNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80
           + E+PVGAV V + +II+   N +    D TAHAEI  IR   + LS   L +  LYVTL
Sbjct: 29  QGEVPVGAVLVRDGEIIAEGWNGSITNHDATAHAEIEVIRKAGKALSNYRLLDTTLYVTL 88

Query: 81  EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140
           EPC MCA A+  +R++R+ YGA + K G        ++    +H   +  G+ E+  R  
Sbjct: 89  EPCPMCAGALLHSRVKRIVYGAPDLKAGAAGTVLDLFSSQAAYHYATVEKGLLEEECRAQ 148

Query: 141 IQDFFKERR 149
           +Q FF+ RR
Sbjct: 149 LQAFFQRRR 157


>gi|225873364|ref|YP_002754823.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Acidobacterium capsulatum ATCC 51196]
 gi|225793789|gb|ACO33879.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Acidobacterium capsulatum ATCC 51196]
          Length = 164

 Score = 95.5 bits (236), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 50/126 (39%), Positives = 71/126 (56%)

Query: 24  IPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83
           +PVGAVAV+   I++R  NR     D TAHAE++ +R     +    L   +LYVTLEPC
Sbjct: 39  VPVGAVAVVEGSILARGQNRVLRDVDPTAHAEMVVLRAAAEAIGNYRLTGCELYVTLEPC 98

Query: 84  TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQD 143
            MCA A+  AR+ RL YGAS+PK G   +          +H  EI  G+  +    ++++
Sbjct: 99  AMCAGAMVHARLARLVYGASDPKAGAAGSVLAVVNHPQLNHQMEITGGVLAEECGTLLRE 158

Query: 144 FFKERR 149
           FF+ RR
Sbjct: 159 FFRARR 164


>gi|332994184|gb|AEF04239.1| cytidine/deoxycytidylate deaminase family protein [Alteromonas sp.
           SN2]
          Length = 180

 Score = 95.5 bits (236), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 54/149 (36%), Positives = 74/149 (49%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M K   +M  AL  A  A    E+PVGA  V N ++I    N      D +AHAE+ A+R
Sbjct: 11  MVKHTKWMQHALSLADKAEAMGEVPVGACVVHNGELIGEGWNTPITDSDPSAHAEMNAVR 70

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
           M  + L      +  LYVTLEPC+MCA  +  ARI+R+ YGAS+ K G   +        
Sbjct: 71  MAAKHLQNYRTTDATLYVTLEPCSMCAGMLVHARIKRVVYGASDAKTGAAGSEMNILNHP 130

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
           + +H  ++  G+        I  FFK RR
Sbjct: 131 SLNHQVDVISGVLADDCADKISAFFKRRR 159


>gi|283131456|dbj|BAI63455.1| tRNA-specific adenosine deaminase [Streptococcus dysgalactiae
           subsp. equisimilis]
          Length = 183

 Score = 95.5 bits (236), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 53/143 (37%), Positives = 78/143 (54%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  AL+EA+ +  + EIP+G V V + +II R  N   E      HAE++AI       
Sbjct: 19  FMQEALKEAEKSLQKAEIPIGCVIVKDGEIIGRGHNVREESNQAIMHAEMMAINEANAHE 78

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  ++VT+EPC MC+ AI LARI  + YGASN K GG ++  Q  T    +H  
Sbjct: 79  GNWRLLDTTMFVTIEPCVMCSGAIGLARIPHVIYGASNQKFGGTDSLYQILTDERLNHRV 138

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           ++  G+  +    I+Q FF++ R
Sbjct: 139 QVERGLLAEDCANIMQTFFRQGR 161


>gi|113461754|ref|YP_719823.1| tRNA-adenosine deaminase [Haemophilus somnus 129PT]
 gi|112823797|gb|ABI25886.1| tRNA-adenosine deaminase [Haemophilus somnus 129PT]
          Length = 158

 Score = 95.5 bits (236), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 59/143 (41%), Positives = 78/143 (54%), Gaps = 1/143 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  AL  A  A    EIPVGAV V     I++   N +    D TAHAEI+A+R   + L
Sbjct: 2   MRYALSLADKAEALGEIPVGAVLVDKQGDILAEGWNLSIIHNDPTAHAEIIALRQAGQKL 61

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  LYVTLEPCTMCA AI  +RI RL +GA + K G + +   F+     +H  
Sbjct: 62  QNYRLLDTTLYVTLEPCTMCAGAILHSRIGRLVFGAYDYKTGAVGSRFHFFNDYKMNHIL 121

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           EI  G+ ++   Q I  FF++RR
Sbjct: 122 EITGGVLQEECSQKISVFFQKRR 144


>gi|297737907|emb|CBI27108.3| unnamed protein product [Vitis vinifera]
          Length = 1151

 Score = 95.5 bits (236), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 55/103 (53%), Positives = 65/103 (63%)

Query: 2    KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
            K   +FM  AL EA+ AA   E+PVGAV V + KII+R  NR  EL+D TAHAE++ IR 
Sbjct: 948  KIDEMFMREALLEAKKAANAWEVPVGAVLVQHGKIIARGCNRVEELRDSTAHAEMICIRE 1007

Query: 62   GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASN 104
               +L    L E  LYVTLEPC MCA AI  ARI  L +GA N
Sbjct: 1008 ASNLLRTWRLSETTLYVTLEPCPMCAGAILQARIDTLVWGAPN 1050


>gi|237808810|ref|YP_002893250.1| CMP/dCMP deaminase zinc-binding [Tolumonas auensis DSM 9187]
 gi|237501071|gb|ACQ93664.1| CMP/dCMP deaminase zinc-binding [Tolumonas auensis DSM 9187]
          Length = 164

 Score = 95.5 bits (236), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 57/143 (39%), Positives = 78/143 (54%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  A++ A+ A    E+PVGAV VLNN++I    N +    D  AHAEI+AIR   + +
Sbjct: 10  WMQYAMQLARRAEEAGEVPVGAVLVLNNEVIGEGWNLSICRHDPCAHAEIMAIRQAGQNI 69

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L    LYVTLEPC MCA A+  +RI RL YGAS+ K G   +     T    +H  
Sbjct: 70  GNYRLLGATLYVTLEPCIMCAGAMIHSRIERLVYGASDLKTGAAGSVFDVLTDPRHNHIV 129

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
            +  GI  +   Q + +FF+ RR
Sbjct: 130 SVIGGIEAEACSQQLSNFFRRRR 152


>gi|33152629|ref|NP_873982.1| hypothetical protein HD1591 [Haemophilus ducreyi 35000HP]
 gi|33148853|gb|AAP96371.1| conserved hypothetical protein [Haemophilus ducreyi 35000HP]
          Length = 183

 Score = 95.5 bits (236), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 59/144 (40%), Positives = 78/144 (54%), Gaps = 1/144 (0%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNN-KIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
            M  AL  A+ A    EIPVGAV V +   II    N+   L D +AHAEILAIR     
Sbjct: 30  LMQYALTLAKRAETMGEIPVGAVLVDSKGNIIGEGWNQVIALSDPSAHAEILAIRQASHR 89

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           L    L +  LYVTLEPCTMCA AI  +R+ RL +GAS+ K G I +    +     +H 
Sbjct: 90  LQNYRLLDCTLYVTLEPCTMCAGAILHSRLSRLVFGASDYKTGAIGSRFHLFEDYKMNHL 149

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
             +  G+ ++   + I +FF+ RR
Sbjct: 150 LTVQGGVLKEACSKQISEFFQRRR 173


>gi|298488260|ref|ZP_07006293.1| tRNA-specific adenosine-34 deaminase [Pseudomonas savastanoi pv.
           savastanoi NCPPB 3335]
 gi|298157199|gb|EFH98286.1| tRNA-specific adenosine-34 deaminase [Pseudomonas savastanoi pv.
           savastanoi NCPPB 3335]
          Length = 169

 Score = 95.5 bits (236), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 51/127 (40%), Positives = 72/127 (56%)

Query: 23  EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEP 82
           E+PVGAV V N +II R  N      D +AHAE++AIR   R L    L    LYVTLEP
Sbjct: 31  EVPVGAVVVQNGEIIGRGYNCPISASDPSAHAEMVAIRDAARALDNYRLSGSTLYVTLEP 90

Query: 83  CTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQ 142
           C+MCA  I  +R+ R+ YGA  PK G +++  QF++    +H      G+  +    ++ 
Sbjct: 91  CSMCAGLIVHSRVARVVYGALEPKAGIVQSQGQFFSQGFLNHRVLFEGGVLGEECGAMLS 150

Query: 143 DFFKERR 149
           +FF+ RR
Sbjct: 151 EFFRMRR 157


>gi|241662996|ref|YP_002981356.1| CMP/dCMP deaminase zinc-binding [Ralstonia pickettii 12D]
 gi|240865023|gb|ACS62684.1| CMP/dCMP deaminase zinc-binding [Ralstonia pickettii 12D]
          Length = 182

 Score = 95.5 bits (236), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 52/148 (35%), Positives = 79/148 (53%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           ++   +M  AL +A+ A  + E+PVGAV V  N+I+    N      D +AHAE+ A+R 
Sbjct: 17  ERDGYWMQQALVQAKFAWGQGEVPVGAVVVRGNEIVGVGYNAPIGTHDPSAHAEMRALRQ 76

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
               L    LP+ +++VTLEPC MCA A+  AR+ R+ YGA +PK G   +    +    
Sbjct: 77  AAEKLGNYRLPDCEVFVTLEPCVMCAGAMLHARVARVVYGAPDPKTGAAGSILDLFAETR 136

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H   I   +  Q    +++ FF ERR
Sbjct: 137 LNHQTAITGSVLAQECGDMLRAFFAERR 164


>gi|330813628|ref|YP_004357867.1| tRNA-specific adenosine-34 deaminase [Candidatus Pelagibacter sp.
           IMCC9063]
 gi|327486723|gb|AEA81128.1| tRNA-specific adenosine-34 deaminase [Candidatus Pelagibacter sp.
           IMCC9063]
          Length = 129

 Score = 95.5 bits (236), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 48/128 (37%), Positives = 76/128 (59%), Gaps = 2/128 (1%)

Query: 24  IPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81
           +PV A+ V   + KII+RA N +   KD  AHAEIL IR   + L+++ L  +D+Y +LE
Sbjct: 1   MPVSAIIVDPKSKKIIARAHNLSIRNKDPLAHAEILVIRKALKFLNKKRLDGMDIYCSLE 60

Query: 82  PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141
           PC MC +AI+ +++R +Y+ A +   GG+ NG +        +    Y G  E +  +I+
Sbjct: 61  PCVMCTSAIAFSQLRNIYFCAEDKASGGLINGPKLGFSKYLKYKFSFYYGFEENKFSKIL 120

Query: 142 QDFFKERR 149
            DFFK++R
Sbjct: 121 VDFFKQKR 128


>gi|225569894|ref|ZP_03778919.1| hypothetical protein CLOHYLEM_05989 [Clostridium hylemonae DSM
           15053]
 gi|225161364|gb|EEG73983.1| hypothetical protein CLOHYLEM_05989 [Clostridium hylemonae DSM
           15053]
          Length = 159

 Score = 95.5 bits (236), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 54/143 (37%), Positives = 72/143 (50%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  A+++A  A   NE P+G V V   +II R  NR    K+  AHAEI AIR   R +
Sbjct: 8   FMKEAIKQAGKAYALNETPIGCVIVYEGRIIGRGYNRRNTDKNTLAHAEITAIRKASRKM 67

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L    LYVTLEPC MCA AI  +R+ R+  G  NPK G   +          +H  
Sbjct: 68  GDWRLEGCTLYVTLEPCPMCAGAIVQSRMDRVVVGCMNPKAGCAGSVLNVLQTEGFNHQT 127

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+  G+       +++ FF+E R
Sbjct: 128 ELTTGVCGGECSSMMKSFFRELR 150


>gi|187928419|ref|YP_001898906.1| CMP/dCMP deaminase zinc-binding [Ralstonia pickettii 12J]
 gi|187725309|gb|ACD26474.1| CMP/dCMP deaminase zinc-binding [Ralstonia pickettii 12J]
          Length = 182

 Score = 95.5 bits (236), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 52/148 (35%), Positives = 79/148 (53%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           ++   +M  AL +A+ A  + E+PVGAV V  N+I+    N      D +AHAE+ A+R 
Sbjct: 17  ERDGYWMQQALVQAKFAWGQGEVPVGAVVVRGNEIVGVGYNAPIGTHDPSAHAEMRALRQ 76

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
               L    LP+ +++VTLEPC MCA A+  AR+ R+ YGA +PK G   +    +    
Sbjct: 77  AAEKLGNYRLPDCEVFVTLEPCVMCAGAMLHARVARVVYGAPDPKTGAAGSILDLFAETR 136

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H   I   +  Q    +++ FF ERR
Sbjct: 137 LNHQTAITGSVLAQECGDMLRAFFAERR 164


>gi|210623915|ref|ZP_03294124.1| hypothetical protein CLOHIR_02076 [Clostridium hiranonis DSM 13275]
 gi|210153279|gb|EEA84285.1| hypothetical protein CLOHIR_02076 [Clostridium hiranonis DSM 13275]
          Length = 371

 Score = 95.5 bits (236), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 57/149 (38%), Positives = 74/149 (49%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M     FM  AL EA+ A  + E P+GAV V + +II R  N    LKD TAH+EILAI+
Sbjct: 223 MSDDEYFMMEALREAKKAYDKEETPIGAVIVKDGEIIGRGHNLTEHLKDATAHSEILAIK 282

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              + L    L    +YVT+EPC MC  AI  +RIR +  GA   K   IE  + F    
Sbjct: 283 NAAKKLKGWRLFGCKMYVTMEPCVMCCGAIVNSRIREVVIGAKRVKNAKIEKQSDFKKEY 342

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
                 E   G+ E+    ++  FFK  R
Sbjct: 343 FEDSKVEYKYGVLEEECAGMLGSFFKRLR 371


>gi|220905293|ref|YP_002480605.1| CMP/dCMP deaminase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
 gi|219869592|gb|ACL49927.1| CMP/dCMP deaminase zinc-binding [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
          Length = 195

 Score = 95.5 bits (236), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 55/144 (38%), Positives = 82/144 (56%), Gaps = 1/144 (0%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
            M  AL+ A++AA   E+PVGAV V  + ++++  GN    L D TAHAEILA+R   ++
Sbjct: 44  LMDRALDRARHAAALGEVPVGAVLVAPDGRVLAEEGNAPVALSDPTAHAEILALRRAGQM 103

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           L    L    L VTLEPC MCAAA   AR+  L YGA++   G + +  +++   + +HS
Sbjct: 104 LGNYRLGGCVLVVTLEPCAMCAAACIHARLAGLVYGAADDLAGAVVSRAEYFDAQSANHS 163

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
                G+  +    +++DFF  RR
Sbjct: 164 LWHMGGVRGEECATLLRDFFAVRR 187


>gi|190574881|ref|YP_001972726.1| putative cytidine and deoxycytidylate deaminase [Stenotrophomonas
           maltophilia K279a]
 gi|190012803|emb|CAQ46432.1| putative cytidine and deoxycytidylate deaminase [Stenotrophomonas
           maltophilia K279a]
          Length = 174

 Score = 95.5 bits (236), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 57/145 (39%), Positives = 83/145 (57%), Gaps = 2/145 (1%)

Query: 7   FMSCALEEAQNAALR-NEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           +M  AL  A+ A    +EIPVGAV V  + +++    N N    D +AHAEI+A+R G +
Sbjct: 16  WMRHALALAERAQREFDEIPVGAVLVGADGQLLGEGWNLNIASHDPSAHAEIVAMRAGGK 75

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
           +L+   L    LYVTLEPC MCA AI  AR+ RL YGAS+PK G   +       A  +H
Sbjct: 76  LLANHRLLGSTLYVTLEPCAMCAMAIVHARVSRLVYGASDPKTGACGSVFDLLGDARHNH 135

Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149
             EI+ G+  + +   + ++F+ +R
Sbjct: 136 RVEIHGGVLAKEASTRLTNYFRAKR 160


>gi|295103971|emb|CBL01515.1| tRNA-adenosine deaminase [Faecalibacterium prausnitzii SL3/3]
          Length = 166

 Score = 95.5 bits (236), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 50/126 (39%), Positives = 73/126 (57%), Gaps = 1/126 (0%)

Query: 24  IPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83
           +PVGAV   + ++I+ A N     K+   HAE+LAI   C+ L    L E +L+VTLEPC
Sbjct: 23  VPVGAVVARHGEVIATAHNTRETEKNALHHAELLAIDAACKALGGWRLWECELFVTLEPC 82

Query: 84  TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQD 143
            MCA  I  +R+RR+ YGA++ K G   + T  + L   HH P +  G+ E  ++Q++Q 
Sbjct: 83  PMCAGGIINSRLRRVVYGAADTKAGCCGSVTDLFALPFNHH-PVVEKGLREAEAQQLLQA 141

Query: 144 FFKERR 149
           FF   R
Sbjct: 142 FFVSLR 147


>gi|332305596|ref|YP_004433447.1| CMP/dCMP deaminase zinc-binding protein [Glaciecola agarilytica
           4H-3-7+YE-5]
 gi|332172925|gb|AEE22179.1| CMP/dCMP deaminase zinc-binding protein [Glaciecola agarilytica
           4H-3-7+YE-5]
          Length = 162

 Score = 95.5 bits (236), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 54/149 (36%), Positives = 80/149 (53%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +++  ++M  AL  A  AA   EIPVGAV V + ++I    N++  L D +AHAE+ AIR
Sbjct: 3   LEQDQLWMRHALALATKAADAGEIPVGAVLVKDQQVIGEGWNQSIMLNDPSAHAEMQAIR 62

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
                +    L    LYVTLEPCTMCA  +  +RI RL +GA + K G   +        
Sbjct: 63  QAGEFIQNYRLIGTTLYVTLEPCTMCAGLLVHSRIERLVFGAHDAKTGAAGSIMDVLRDT 122

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  E+  G+  ++  + I  FF++RR
Sbjct: 123 RLNHQVEVVGGVLGEQCGETISAFFRKRR 151


>gi|120602647|ref|YP_967047.1| CMP/dCMP deaminase, zinc-binding [Desulfovibrio vulgaris DP4]
 gi|120562876|gb|ABM28620.1| tRNA-adenosine deaminase [Desulfovibrio vulgaris DP4]
          Length = 161

 Score = 95.5 bits (236), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 56/144 (38%), Positives = 76/144 (52%), Gaps = 1/144 (0%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
            M  AL EA+ A    E+PVGAV V    +II R  NR     D +AHAE++A+RM    
Sbjct: 16  LMDEALAEARLAQAEGEVPVGAVVVDKAGRIIGRGHNRCLRDNDPSAHAEMVALRMAATT 75

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
            +   L    L VTLEPC MCA AI  AR+  + YGA +PK G + +  + +     +H 
Sbjct: 76  TANYRLGGTFLVVTLEPCLMCAGAIVHARVEGVVYGAEDPKAGAVTSCLEAFEQPFLNHR 135

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
           P    G+  +    I++DFF  RR
Sbjct: 136 PWHMGGVRRRACTAILKDFFNGRR 159


>gi|260909419|ref|ZP_05916126.1| cytidine/deoxycytidylate deaminase [Prevotella sp. oral taxon 472
           str. F0295]
 gi|260636435|gb|EEX54418.1| cytidine/deoxycytidylate deaminase [Prevotella sp. oral taxon 472
           str. F0295]
          Length = 155

 Score = 95.5 bits (236), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 48/128 (37%), Positives = 70/128 (54%), Gaps = 5/128 (3%)

Query: 22  NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81
            E+P+GAV     ++++RA N    L DVTAHAE+ AI     +L  + LPE  LYVT+E
Sbjct: 32  GEVPIGAVIACKGRVVARAHNLTETLCDVTAHAEMQAITAAANMLGGKYLPECTLYVTVE 91

Query: 82  PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141
           PC MCA A   A++ R+ YG  + K      G + +     H    +  G+ E+  RQ++
Sbjct: 92  PCPMCAGACGWAQLGRIVYGTRDEK-----RGYERFAPNVLHAKATVTAGVLEEECRQLM 146

Query: 142 QDFFKERR 149
           +DFF   R
Sbjct: 147 KDFFSGLR 154


>gi|295694717|ref|YP_003587955.1| CMP/dCMP deaminase zinc-binding protein [Bacillus tusciae DSM 2912]
 gi|295410319|gb|ADG04811.1| CMP/dCMP deaminase zinc-binding protein [Bacillus tusciae DSM 2912]
          Length = 174

 Score = 95.5 bits (236), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 52/143 (36%), Positives = 76/143 (53%), Gaps = 1/143 (0%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  AL+ A  A    E+P+GAV V   KI+    N      D TAHAE++A+R   + +
Sbjct: 10  YMERALQLAAYAGEMGEVPIGAVVVAGGKILGEGCNLREMWNDPTAHAEMVALRQAAQAV 69

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L    LYVTLEPC MC  A  LAR+ R+ +GA +PK G   +  Q    A  +H  
Sbjct: 70  GGWRLSGTTLYVTLEPCAMCVGAAVLARVERVVFGAPDPKAGACGSVLQVAD-APLNHRL 128

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           ++  G+ +Q    +++ FF+E R
Sbjct: 129 KVEGGVLQQSCSHLLKQFFRELR 151


>gi|114798136|ref|YP_761455.1| cytidine/deoxycytidylate deaminase family protein [Hyphomonas
           neptunium ATCC 15444]
 gi|114738310|gb|ABI76435.1| cytidine/deoxycytidylate deaminase family protein [Hyphomonas
           neptunium ATCC 15444]
          Length = 146

 Score = 95.5 bits (236), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 63/145 (43%), Positives = 87/145 (60%), Gaps = 3/145 (2%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M+ A+E A+ AA   E+PVGAV V     +I+    NR     D +AHAEI+AIR   + 
Sbjct: 1   MARAMELAREAAKAGEVPVGAVVVDPETGEIVGEGYNRPVGTHDPSAHAEIIAIRAAAQK 60

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           L    L  +DL+VTLEPC MCA AIS ARI RL + A++ KGG + +G +F+   TCH  
Sbjct: 61  LGNYRLTGLDLHVTLEPCAMCAGAISFARIGRLVFAAADIKGGAVMSGPRFFEQPTCHWR 120

Query: 126 PEI-YPGISEQRSRQIIQDFFKERR 149
           PE     + E  +  +++DFF+ RR
Sbjct: 121 PEWRQDALHEAEAADLLRDFFRTRR 145


>gi|11068000|gb|AAG28837.1| cytosine deaminase [Bifidobacterium longum]
          Length = 143

 Score = 95.5 bits (236), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 57/144 (39%), Positives = 76/144 (52%), Gaps = 3/144 (2%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLN--NKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M CALE A  AA   ++PVGAV VL+   +I+ R  N      D  AHAEI+A+R   + 
Sbjct: 1   MRCALELAGQAAAAGDVPVGAV-VLDAAGQIVGRGYNTREADGDPLAHAEIIAMRQAAQA 59

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           L    L +  L VTLEPC MCA A     I  + +GA +PK G   +           HS
Sbjct: 60  LGAWNLADCTLAVTLEPCPMCAGACIQTHIGTIAFGAWDPKLGACGSIWDIPRDPHIGHS 119

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
           PE++ G+ E   + I+ DFF +RR
Sbjct: 120 PEVHGGVLEGECQSILTDFFAQRR 143


>gi|15221490|ref|NP_177039.1| TADA (TRNA ARGININE ADENOSINE DEAMINASE); catalytic/ hydrolase/ zinc
            ion binding [Arabidopsis thaliana]
 gi|75336834|sp|Q9S7I0|TADA_ARATH RecName: Full=tRNA-specific adenosine deaminase, chloroplastic;
            Short=TADA; Flags: Precursor
 gi|5734706|gb|AAD49971.1|AC008075_4 Contains similarity to gi|3329316 cytosine deaminase from Chlamydia
            trachomatis genome gb|AE001357 and contains a PF|00383
            cytidine deaminase zinc-binding region. EST gb|W43306
            comes from this gene [Arabidopsis thaliana]
 gi|12324145|gb|AAG52046.1|AC011914_16 unknown protein; 92941-88668 [Arabidopsis thaliana]
 gi|332196710|gb|AEE34831.1| tRNA-specific adenosine deaminase [Arabidopsis thaliana]
          Length = 1307

 Score = 95.1 bits (235), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 67/162 (41%), Positives = 85/162 (52%), Gaps = 20/162 (12%)

Query: 6    VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
            +FM  AL EA+ AA   E+PVGAV V + KII+R  N   EL+D TAHAE++ IR G + 
Sbjct: 1112 IFMREALVEAKKAADTWEVPVGAVLVHDGKIIARGYNLVEELRDSTAHAEMICIREGSKA 1171

Query: 66   LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASN-------------PKGGGIEN 112
            L    L +  LYVTLEPC MCA AI  AR+  L +GA N             P G G  N
Sbjct: 1172 LRSWRLADTTLYVTLEPCPMCAGAILQARVNTLVWGAPNKLLGADGSWIRLFPGGEG--N 1229

Query: 113  GTQ-----FYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
            G++        +   H    I  G+ E    Q +Q FF+ RR
Sbjct: 1230 GSEASEKPPPPVHPFHPKMTIRRGVLESECAQTMQQFFQLRR 1271


>gi|212703407|ref|ZP_03311535.1| hypothetical protein DESPIG_01450 [Desulfovibrio piger ATCC 29098]
 gi|212673152|gb|EEB33635.1| hypothetical protein DESPIG_01450 [Desulfovibrio piger ATCC 29098]
          Length = 144

 Score = 95.1 bits (235), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 58/143 (40%), Positives = 81/143 (56%), Gaps = 1/143 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  AL+EA+ AA  +E+PVGAV V  + ++++RA NR   L D TAHAEILA+R      
Sbjct: 1   MRLALDEARQAAREDEVPVGAVLVAADGRLLARAHNRPVALHDPTAHAEILALRAAGAAS 60

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L    L VTLEPC MCAAA+  AR+  + YGA++   G + + T+       +H  
Sbjct: 61  GNYRLGGGVLVVTLEPCAMCAAALVHARLAGVVYGAADRLAGAVTSCTETLDQPFFNHRV 120

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
               G+  + S  ++QDFF  RR
Sbjct: 121 WHMGGVLARESVDLLQDFFAGRR 143


>gi|312796599|ref|YP_004029521.1| tRNA-specific adenosine deaminase [Burkholderia rhizoxinica HKI
           454]
 gi|312168374|emb|CBW75377.1| tRNA-specific adenosine deaminase (EC 3.5.4.-) [Burkholderia
           rhizoxinica HKI 454]
          Length = 173

 Score = 95.1 bits (235), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 48/128 (37%), Positives = 72/128 (56%)

Query: 22  NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81
            E+PVGAV V  +++I++  N+     D +AHAE++A+R   + LS   +P  +LYVTLE
Sbjct: 33  GEVPVGAVVVRGDEVIAQGFNQPISTHDPSAHAEMVALRAAAQSLSNYRMPGCELYVTLE 92

Query: 82  PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141
           PC MCA AI  ARI R+ +GA +PK G   +    ++    +H   +  G+        +
Sbjct: 93  PCLMCAGAIMHARIARVVFGAHDPKTGACGSVVDVFSQPRLNHHTSVVGGVLADECSHEL 152

Query: 142 QDFFKERR 149
             FF ERR
Sbjct: 153 SQFFVERR 160


>gi|255546921|ref|XP_002514518.1| conserved hypothetical protein [Ricinus communis]
 gi|223546122|gb|EEF47624.1| conserved hypothetical protein [Ricinus communis]
          Length = 1624

 Score = 95.1 bits (235), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 67/166 (40%), Positives = 86/166 (51%), Gaps = 19/166 (11%)

Query: 2    KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
            K   +FM  AL EA+ AA   E+PVGAV V + KII+R  N   EL+D TAHAE++ IR 
Sbjct: 1098 KIDEMFMREALLEAKKAADTWEVPVGAVLVQHGKIIARGYNLVEELRDSTAHAEMICIRE 1157

Query: 62   GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASN-------------PKGG 108
                L    L E  LYVTLEPC MCA AI  ARI  + +GA N             P GG
Sbjct: 1158 ASNQLRSWRLAETTLYVTLEPCPMCAGAILQARIDTVVWGAPNKLLGADGSWIRLFPNGG 1217

Query: 109  GIENGTQFYT-----LATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
            G  +G++        +   H + +I  GI       ++Q FF+ RR
Sbjct: 1218 G-GSGSELVDKPPAPVHPFHPNMKIRRGILAPECADVMQQFFQLRR 1262


>gi|50913560|ref|YP_059532.1| tRNA-specific adenosine deaminase [Streptococcus pyogenes
           MGAS10394]
 gi|71902843|ref|YP_279646.1| tRNA-specific adenosine deaminase [Streptococcus pyogenes MGAS6180]
 gi|94987813|ref|YP_595914.1| tRNA-specific adenosine deaminase [Streptococcus pyogenes MGAS9429]
 gi|94989691|ref|YP_597791.1| tRNA-specific adenosine deaminase [Streptococcus pyogenes
           MGAS10270]
 gi|94991689|ref|YP_599788.1| tRNA-specific adenosine deaminase [Streptococcus pyogenes MGAS2096]
 gi|94993570|ref|YP_601668.1| tRNA-specific adenosine deaminase [Streptococcus pyogenes
           MGAS10750]
 gi|306828137|ref|ZP_07461400.1| cytidine/deoxycytidylate deaminase [Streptococcus pyogenes ATCC
           10782]
 gi|50902634|gb|AAT86349.1| tRNA-specific adenosine deaminase [Streptococcus pyogenes
           MGAS10394]
 gi|71801938|gb|AAX71291.1| tRNA-specific adenosine deaminase [Streptococcus pyogenes MGAS6180]
 gi|94541321|gb|ABF31370.1| tRNA-specific adenosine deaminase [Streptococcus pyogenes MGAS9429]
 gi|94543199|gb|ABF33247.1| tRNA-specific adenosine deaminase [Streptococcus pyogenes
           MGAS10270]
 gi|94545197|gb|ABF35244.1| tRNA-specific adenosine deaminase [Streptococcus pyogenes MGAS2096]
 gi|94547078|gb|ABF37124.1| tRNA-specific adenosine deaminase [Streptococcus pyogenes
           MGAS10750]
 gi|304429674|gb|EFM32720.1| cytidine/deoxycytidylate deaminase [Streptococcus pyogenes ATCC
           10782]
          Length = 179

 Score = 95.1 bits (235), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 54/149 (36%), Positives = 80/149 (53%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +++   FM  AL+EA+ +  + EIP+G V V + +II R  N   E      HAE++AI 
Sbjct: 13  LEEQTYFMQEALKEAEKSLQKAEIPIGCVIVKDGEIIGRGHNAREESNQAIMHAEMMAIN 72

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
                     L +  L+VT+EPC MC+ AI LARI  + YGASN K GG ++  Q  T  
Sbjct: 73  EANAHEGNWRLLDTTLFVTIEPCVMCSGAIGLARIPHVIYGASNQKFGGADSLYQILTDE 132

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  ++  G+       I+Q FF++ R
Sbjct: 133 RLNHRVQVERGLLAADCANIMQTFFRQGR 161


>gi|296104233|ref|YP_003614379.1| tRNA-specific adenosine deaminase [Enterobacter cloacae subsp.
           cloacae ATCC 13047]
 gi|295058692|gb|ADF63430.1| tRNA-specific adenosine deaminase [Enterobacter cloacae subsp.
           cloacae ATCC 13047]
          Length = 168

 Score = 95.1 bits (235), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 54/143 (37%), Positives = 75/143 (52%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  AL  A+ A    E+PVGAV V NN++I    NR     D TAHAEI+A+R G  +L
Sbjct: 11  WMRHALTLARRAWDEGEVPVGAVLVHNNQVIGEGWNRPIGRHDPTAHAEIMALRQGGLVL 70

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  LYVTLEPC MC+ A+  +RI  L +GA + K G   +          +H  
Sbjct: 71  QNYRLLDTTLYVTLEPCVMCSGAMVHSRIGTLVFGARDEKTGAAGSLMDVLGHPGMNHQV 130

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           +   G+       ++ DFF+ RR
Sbjct: 131 KTIGGVLAPECSGLLSDFFRMRR 153


>gi|28209851|ref|NP_780795.1| cytosine deaminase [Clostridium tetani E88]
 gi|28202286|gb|AAO34732.1| cytosine deaminase [Clostridium tetani E88]
          Length = 146

 Score = 95.1 bits (235), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 59/146 (40%), Positives = 82/146 (56%), Gaps = 7/146 (4%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  A+ EA+ A   NE+P+GAV V  NKII R  N   + K+  AHAEI+AIR  C+ +
Sbjct: 5   FMKEAVLEARKALNINEVPIGAVIVKENKIIGRGHNLVEKSKNPLAHAEIIAIREACKSI 64

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG---IENGTQFYTLATCH 123
           +   L    +YVTLEPC MCA AI  +R+ ++Y G  +P  G    I N TQ   L T  
Sbjct: 65  NNWRLNGCHMYVTLEPCPMCAGAIIRSRMDKVYIGTFDPNSGACGTIINLTQNKYLNTNI 124

Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149
           +   +Y    ++ S  +++ FF  RR
Sbjct: 125 NINWLY----DEESSTLLKKFFYSRR 146


>gi|26450841|dbj|BAC42528.1| putative deaminase [Arabidopsis thaliana]
 gi|38564244|gb|AAR23701.1| At1g68720 [Arabidopsis thaliana]
          Length = 1307

 Score = 95.1 bits (235), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 67/162 (41%), Positives = 85/162 (52%), Gaps = 20/162 (12%)

Query: 6    VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
            +FM  AL EA+ AA   E+PVGAV V + KII+R  N   EL+D TAHAE++ IR G + 
Sbjct: 1112 IFMREALVEAKKAADTWEVPVGAVLVHDGKIIARGYNLVEELRDSTAHAEMICIREGSKA 1171

Query: 66   LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASN-------------PKGGGIEN 112
            L    L +  LYVTLEPC MCA AI  AR+  L +GA N             P G G  N
Sbjct: 1172 LRSWRLADTTLYVTLEPCPMCAGAILQARVNTLVWGAPNKLLGADGSWIRLFPGGEG--N 1229

Query: 113  GTQ-----FYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
            G++        +   H    I  G+ E    Q +Q FF+ RR
Sbjct: 1230 GSEASEKPPPPVHPFHPKMTIRRGVLESECAQTMQQFFQLRR 1271


>gi|19745357|ref|NP_606493.1| hypothetical protein spyM18_0196 [Streptococcus pyogenes MGAS8232]
 gi|73921072|sp|Q8P2R7|Y196_STRP8 RecName: Full=Uncharacterized deaminase spyM18_0196
 gi|19747462|gb|AAL96992.1| conserved hypothetical protein [Streptococcus pyogenes MGAS8232]
          Length = 159

 Score = 95.1 bits (235), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 54/149 (36%), Positives = 80/149 (53%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +++   FM  AL+EA+ +  + EIP+G V V + +II R  N   E      HAE++AI 
Sbjct: 5   LEEQTYFMQEALKEAEKSLQKAEIPIGCVIVKDGEIIGRGHNAREESNQAIMHAEMMAIN 64

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
                     L +  L+VT+EPC MC+ AI LARI  + YGASN K GG ++  Q  T  
Sbjct: 65  EANAHEGNWRLLDTTLFVTIEPCVMCSGAIGLARIPHVIYGASNQKFGGADSLYQILTDE 124

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  ++  G+       I+Q FF++ R
Sbjct: 125 RLNHRVQVERGLLAADCANIMQTFFRQGR 153


>gi|209558752|ref|YP_002285224.1| Cytosine deaminase [Streptococcus pyogenes NZ131]
 gi|209539953|gb|ACI60529.1| Cytosine deaminase [Streptococcus pyogenes NZ131]
          Length = 171

 Score = 95.1 bits (235), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 54/149 (36%), Positives = 80/149 (53%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +++   FM  AL+EA+ +  + EIP+G V V + +II R  N   E      HAE++AI 
Sbjct: 5   LEEQTYFMQEALKEAEKSLQKAEIPIGCVIVKDGEIIGRGHNAREESNQAIMHAEMMAIN 64

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
                     L +  L+VT+EPC MC+ AI LARI  + YGASN K GG ++  Q  T  
Sbjct: 65  EANAHEGNWRLLDTTLFVTIEPCVMCSGAIGLARIPHVIYGASNQKFGGADSLYQILTDE 124

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  ++  G+       I+Q FF++ R
Sbjct: 125 RLNHRVQVERGLLAADCANIMQTFFRQGR 153


>gi|300704191|ref|YP_003745793.1| tRNA-specific adenosine deaminase [Ralstonia solanacearum CFBP2957]
 gi|299071854|emb|CBJ43182.1| tRNA-specific adenosine deaminase [Ralstonia solanacearum CFBP2957]
          Length = 183

 Score = 95.1 bits (235), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 52/148 (35%), Positives = 78/148 (52%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           ++   +M  AL +A+ A    E+PVGAV V  N+I+    N      D +AHAE+ A+R 
Sbjct: 17  ERDGYWMQQALVQARLAWGEGEVPVGAVVVRGNEIVGVGYNAPIGTHDPSAHAEMRALRQ 76

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
               L    LPE +++VTLEPC MCA A+  AR+ R+ YGA +PK G   +    +    
Sbjct: 77  AAVTLGNYRLPECEVFVTLEPCVMCAGAMLHARVARVVYGAPDPKTGAAGSVLDLFAETR 136

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H   +   +  Q    +++ FF ERR
Sbjct: 137 LNHQTAMLGSVLAQECGDMLRAFFAERR 164


>gi|229823590|ref|ZP_04449659.1| hypothetical protein GCWU000282_00889 [Catonella morbi ATCC 51271]
 gi|229787034|gb|EEP23148.1| hypothetical protein GCWU000282_00889 [Catonella morbi ATCC 51271]
          Length = 178

 Score = 95.1 bits (235), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 52/143 (36%), Positives = 79/143 (55%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  ALE A  A    E+P+GA+ V +  +++ A N        TAHAE+LAI    + L
Sbjct: 18  WMQQALELADQAQALGEVPIGALLVKDGVLLASAYNLREVNHQATAHAELLAIEAANQAL 77

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L    LYVTLEPC MCA A+ L+R+ ++ YGAS+PKGG   +       +  +H P
Sbjct: 78  GAWRLEGCTLYVTLEPCPMCAGALVLSRVDQVVYGASDPKGGCAGSLMNLLEDSRFNHQP 137

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           ++  G+ E +    +++FF+  R
Sbjct: 138 QVIRGVLEAQCSDKLKNFFQGLR 160


>gi|218132702|ref|ZP_03461506.1| hypothetical protein BACPEC_00563 [Bacteroides pectinophilus ATCC
           43243]
 gi|217992428|gb|EEC58431.1| hypothetical protein BACPEC_00563 [Bacteroides pectinophilus ATCC
           43243]
          Length = 160

 Score = 95.1 bits (235), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 53/143 (37%), Positives = 75/143 (52%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  A+++A+ A    E P+G V V  NKII+R  NR    K    HAEI AIR   +++
Sbjct: 12  YMKEAIKQARKAYKIGESPIGCVIVYQNKIIARGYNRRNIDKTTLGHAEITAIRKASKVI 71

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  +YVTLEPC MCA AI  ARI R+  GA NPK G   +      +   +H  
Sbjct: 72  GDWRLEDCTIYVTLEPCQMCAGAIVQARIPRVVIGAMNPKAGCAGSVLNLLEIPQFNHQC 131

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           ++  G+       ++  FF+E R
Sbjct: 132 DVERGVLADECSGLMSSFFRELR 154


>gi|21909689|ref|NP_663957.1| putative cytidine/deoxycytidylate deaminase family protein
           [Streptococcus pyogenes MGAS315]
 gi|56807966|ref|ZP_00365780.1| COG0590: Cytosine/adenosine deaminases [Streptococcus pyogenes M49
           591]
 gi|73921034|sp|Q8K8Q9|TADA_STRP3 RecName: Full=tRNA-specific adenosine deaminase
 gi|73921083|sp|Q5XE14|TADA_STRP6 RecName: Full=tRNA-specific adenosine deaminase
 gi|21903872|gb|AAM78760.1| putative cytidine/deoxycytidylate deaminase family protein
           [Streptococcus pyogenes MGAS315]
          Length = 171

 Score = 95.1 bits (235), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 54/149 (36%), Positives = 80/149 (53%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +++   FM  AL+EA+ +  + EIP+G V V + +II R  N   E      HAE++AI 
Sbjct: 5   LEEQTYFMQEALKEAEKSLQKAEIPIGCVIVKDGEIIGRGHNAREESNQAIMHAEMMAIN 64

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
                     L +  L+VT+EPC MC+ AI LARI  + YGASN K GG ++  Q  T  
Sbjct: 65  EANAHEGNWRLLDTTLFVTIEPCVMCSGAIGLARIPHVIYGASNQKFGGADSLYQILTDE 124

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  ++  G+       I+Q FF++ R
Sbjct: 125 RLNHRVQVERGLLAADCANIMQTFFRQGR 153


>gi|291614449|ref|YP_003524606.1| CMP/dCMP deaminase zinc-binding protein [Sideroxydans
           lithotrophicus ES-1]
 gi|291584561|gb|ADE12219.1| CMP/dCMP deaminase zinc-binding protein [Sideroxydans
           lithotrophicus ES-1]
          Length = 148

 Score = 95.1 bits (235), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 52/142 (36%), Positives = 76/142 (53%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  AL+ A+ AA   E+PVGAV V +  II    N      D +AHAEI A+R   + + 
Sbjct: 1   MRAALDLARQAAQAGEVPVGAVVVRDGLIIGHGCNAPISRHDPSAHAEIAALRDAAQHIG 60

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
              L + +L+VTLEPC MC  A+  ARI R+ +GA +PK G   +    +     +H   
Sbjct: 61  NYRLVDCELFVTLEPCVMCVGAMFHARIARVVFGAQDPKTGAAGSVFNLFNETRLNHHAR 120

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
           I+ G+  +   +++ DFF  RR
Sbjct: 121 IHGGVLAEECGKVLSDFFAMRR 142


>gi|160942564|ref|ZP_02089811.1| hypothetical protein FAEPRAM212_00039 [Faecalibacterium prausnitzii
           M21/2]
 gi|158446148|gb|EDP23151.1| hypothetical protein FAEPRAM212_00039 [Faecalibacterium prausnitzii
           M21/2]
          Length = 169

 Score = 95.1 bits (235), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 49/126 (38%), Positives = 73/126 (57%), Gaps = 1/126 (0%)

Query: 24  IPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83
           +PVGAV   + ++++ A N     K+   HAE+LAI   C+ L    L E +L+VTLEPC
Sbjct: 26  VPVGAVVARHGEVVATAHNTRETEKNALHHAELLAIDAACKALGGWRLWECELFVTLEPC 85

Query: 84  TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQD 143
            MCA  I  +R+RR+ YGA++ K G   + T  + L   HH P +  G+ E  ++Q++Q 
Sbjct: 86  PMCAGGIINSRLRRVVYGAADTKAGCCGSVTDLFALPFNHH-PVVEKGLREAEAQQLLQA 144

Query: 144 FFKERR 149
           FF   R
Sbjct: 145 FFVSLR 150


>gi|15676827|ref|NP_273972.1| cytidine and deoxycytidylate deaminase family protein [Neisseria
           meningitidis MC58]
 gi|7226171|gb|AAF41340.1| cytidine and deoxycytidylate deaminase family protein [Neisseria
           meningitidis MC58]
 gi|316985330|gb|EFV64279.1| cytidine and deoxycytidylate deaminase zinc-binding region family
           protein [Neisseria meningitidis H44/76]
 gi|325140176|gb|EGC62703.1| tRNA-specific adenosine deaminase [Neisseria meningitidis CU385]
 gi|325200381|gb|ADY95836.1| tRNA-specific adenosine deaminase [Neisseria meningitidis H44/76]
          Length = 239

 Score = 95.1 bits (235), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 55/143 (38%), Positives = 80/143 (55%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  AL +A+ ++   EIPVGAV V + KII+ A N      +V+ HAEI A+    R +
Sbjct: 95  FMCEALRQAEQSSADGEIPVGAVIVSDGKIIASAHNTCIADCNVSRHAEINALAQAGREI 154

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L   D+Y+TLEPC MCA+A+  ARIRR+ YGA+ PK G   +    +     +   
Sbjct: 155 QNYRLDGCDIYITLEPCAMCASALIQARIRRVIYGAAEPKTGAAGSIVNLFADKRLNTHT 214

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
            I  GI ++  R ++  FF+ +R
Sbjct: 215 AIRGGILQEECRAVLSRFFQNKR 237


>gi|254281607|ref|ZP_04956575.1| tRNA-specific adenosine deaminase [gamma proteobacterium NOR51-B]
 gi|219677810|gb|EED34159.1| tRNA-specific adenosine deaminase [gamma proteobacterium NOR51-B]
          Length = 164

 Score = 95.1 bits (235), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 53/104 (50%), Positives = 65/104 (62%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
            MS ALE+A  AA + E+PVGAV V++ K+++ AGN      D TAHAEILA+R   R +
Sbjct: 11  MMSLALEKAAMAAAQGEVPVGAVVVMDGKVVATAGNGQIGDCDPTAHAEILALRDAARAI 70

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI 110
               L    LY TLEPCTMC  A+  ARI RL YGA  PK G +
Sbjct: 71  RNYRLAGATLYATLEPCTMCCGALVHARIGRLVYGALEPKAGAV 114


>gi|325134098|gb|EGC56751.1| tRNA-specific adenosine deaminase [Neisseria meningitidis M13399]
 gi|325206234|gb|ADZ01687.1| tRNA-specific adenosine deaminase [Neisseria meningitidis
           M04-240196]
          Length = 163

 Score = 95.1 bits (235), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 55/143 (38%), Positives = 79/143 (55%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  AL +A+ +A   EIPVGAV V + KII+ A N      +V+ HAEI A+      +
Sbjct: 19  FMREALRQAEQSAADGEIPVGAVIVSDGKIIASAHNTCIADCNVSCHAEINALAQAGSEM 78

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L   D+Y+TLEPC MCA+A+  ARIRR+ YGA+ PK G   +    +     +   
Sbjct: 79  QNYRLDGCDIYITLEPCAMCASALIQARIRRVIYGAAEPKTGAAGSIVNLFADKRLNTHT 138

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
            I  GI ++  R ++  FF+ +R
Sbjct: 139 AIRGGILQEECRAVLNRFFQNKR 161


>gi|322692072|ref|YP_004221642.1| cytidine/deoxycytidine deaminase [Bifidobacterium longum subsp.
           longum JCM 1217]
 gi|320456928|dbj|BAJ67550.1| putative cytidine/deoxycytidine deaminase [Bifidobacterium longum
           subsp. longum JCM 1217]
          Length = 149

 Score = 95.1 bits (235), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 57/144 (39%), Positives = 76/144 (52%), Gaps = 3/144 (2%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLN--NKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M CALE A  AA   ++PVGAV VL+   +I+ R  N      D  AHAEI+A+R   + 
Sbjct: 7   MRCALELAGQAAAAGDVPVGAV-VLDAAGQIVGRGYNTREADGDPLAHAEIIAMRQAAQA 65

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           L    L +  L VTLEPC MCA A     I  + +GA +PK G   +           HS
Sbjct: 66  LGAWNLADCTLAVTLEPCPMCAGACIQTHIGTIAFGAWDPKLGACGSIWDIPRDPHIGHS 125

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
           PE++ G+ E   + I+ DFF +RR
Sbjct: 126 PEVHGGVLEGECQSILTDFFAQRR 149


>gi|153216547|ref|ZP_01950510.1| zinc-binding domain protein [Vibrio cholerae 1587]
 gi|124114222|gb|EAY33042.1| zinc-binding domain protein [Vibrio cholerae 1587]
          Length = 193

 Score = 95.1 bits (235), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 50/129 (38%), Positives = 72/129 (55%)

Query: 21  RNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80
           + E+PVGAV V + +II+   N +    D TAHAEI  IR   + LS   L +  LYVTL
Sbjct: 45  QGEVPVGAVLVRDGEIIAEGCNGSITNHDATAHAEIEVIRKAGKALSNYRLLDTTLYVTL 104

Query: 81  EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140
           EPC MCA A+  +R++R+ YGA + K G        ++    +H   +  G+ E+  R  
Sbjct: 105 EPCPMCAGALLHSRVKRIVYGAPDLKAGAAGTVMDLFSSQAAYHYATVEKGLLEEECRAQ 164

Query: 141 IQDFFKERR 149
           +Q FF+ RR
Sbjct: 165 LQAFFQRRR 173


>gi|288818013|ref|YP_003432360.1| tRNA-specific adenosine deaminase [Hydrogenobacter thermophilus
           TK-6]
 gi|288787412|dbj|BAI69159.1| tRNA-specific adenosine deaminase [Hydrogenobacter thermophilus
           TK-6]
 gi|308751614|gb|ADO45097.1| CMP/dCMP deaminase zinc-binding protein [Hydrogenobacter
           thermophilus TK-6]
          Length = 149

 Score = 95.1 bits (235), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 51/143 (35%), Positives = 81/143 (56%), Gaps = 1/143 (0%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           F+   L  A+ A  R E PVG V V + K+I++A NR  ELKD TAHAE+LA+R     +
Sbjct: 4   FIELCLNLARRAYERGETPVGCVVVKDGKVIAKAHNRVEELKDPTAHAEMLALREASESM 63

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
             + L   ++YV+LEPC MC  A+ L R+ RL + A + + GG+ +          HH  
Sbjct: 64  GGKYLYGCEIYVSLEPCVMCTYAMILKRVERLIFLAQDYRHGGVMSMYSLLDDMRFHHRV 123

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
             +  +  + ++++++DFF+  R
Sbjct: 124 R-WEYMPVEEAQKLLRDFFRNLR 145


>gi|46579939|ref|YP_010747.1| cytidine/deoxycytidylate deaminase family protein [Desulfovibrio
           vulgaris str. Hildenborough]
 gi|46449355|gb|AAS96006.1| cytidine/deoxycytidylate deaminase family protein [Desulfovibrio
           vulgaris str. Hildenborough]
          Length = 161

 Score = 94.7 bits (234), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 56/144 (38%), Positives = 76/144 (52%), Gaps = 1/144 (0%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
            M  AL EA+ A    E+PVGAV V    +II R  NR     D +AHAE++A+RM    
Sbjct: 16  LMDEALAEARLAQAEGEVPVGAVVVDKAGRIIGRGHNRCLRDNDPSAHAEMVALRMAATT 75

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
            +   L    L VTLEPC MCA AI  AR+  + YGA +PK G + +  + +     +H 
Sbjct: 76  TANYRLGGTFLVVTLEPCLMCAGAIVHARVEGVVYGAEDPKAGAVTSCLEAFEQPFLNHR 135

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
           P    G+  +    I++DFF  RR
Sbjct: 136 PWHMGGLRRRACTAILKDFFNGRR 159


>gi|325204006|gb|ADY99459.1| tRNA-specific adenosine deaminase [Neisseria meningitidis
           M01-240355]
          Length = 239

 Score = 94.7 bits (234), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 55/143 (38%), Positives = 80/143 (55%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  AL +A+ ++   EIPVGAV V + KII+ A N      +V+ HAEI A+    R +
Sbjct: 95  FMCEALRQAEQSSADGEIPVGAVIVSDGKIIASAHNTCIADCNVSRHAEINALAQAGREI 154

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L   D+Y+TLEPC MCA+A+  ARIRR+ YGA+ PK G   +    +     +   
Sbjct: 155 QNYRLDGCDIYITLEPCAMCASALIQARIRRVIYGAAEPKTGAAGSIVNLFADKRLNTHT 214

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
            I  GI ++  R ++  FF+ +R
Sbjct: 215 AIRGGILQEECRAVLSRFFQNKR 237


>gi|72381983|ref|YP_291338.1| putative cytidine/deoxycytidylate deaminase [Prochlorococcus
           marinus str. NATL2A]
 gi|72001833|gb|AAZ57635.1| putative cytidine/deoxycytidylate deaminase [Prochlorococcus
           marinus str. NATL2A]
          Length = 155

 Score = 94.7 bits (234), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 53/144 (36%), Positives = 79/144 (54%), Gaps = 3/144 (2%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNK--IISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M+  L +A+    R E+P+ AV +L+ K   I   GNR   +KD   HAE++A+R    I
Sbjct: 1   MTRLLTKARLVGERGEVPIAAV-ILDKKGRCIGYGGNRRESMKDPLGHAELVALRQASWI 59

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
            +     +  L V LEPC MCA A+  AR+ ++ YG+ +PK G +          + HH 
Sbjct: 60  KNDWRFNDCTLIVNLEPCPMCAGALIQARMGKIIYGSEDPKRGALGGTINLAEHKSAHHR 119

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
             I  GI E+ SR+II D+FK++R
Sbjct: 120 MLIERGIMEEESRKIIVDWFKDKR 143


>gi|254479893|ref|ZP_05093141.1| Cytidine and deoxycytidylate deaminase zinc-binding region domain
           protein [marine gamma proteobacterium HTCC2148]
 gi|214039455|gb|EEB80114.1| Cytidine and deoxycytidylate deaminase zinc-binding region domain
           protein [marine gamma proteobacterium HTCC2148]
          Length = 153

 Score = 94.7 bits (234), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 52/143 (36%), Positives = 76/143 (53%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  AL  A  A    E+P+GAV V + +++    N     KD TAHAE++A+R   ++ 
Sbjct: 10  WMRRALALADRAGNEGEVPIGAVIVKDGQLLGEGWNSVIAFKDPTAHAEVVAMRDAAQMT 69

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               LP   +YVTLEPCTMCA A+  AR+  L + A  PK G + +          +H  
Sbjct: 70  GNYRLPGSTVYVTLEPCTMCAGAMIHARVAELVFAAKEPKAGVVCSTCSLLDEPRYNHRI 129

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
               G+  + SR+ +Q FF+ERR
Sbjct: 130 RWQGGVLAEMSRERLQAFFRERR 152


>gi|297205021|ref|ZP_06922417.1| tRNA-specific adenosine deaminase [Lactobacillus jensenii JV-V16]
 gi|297149599|gb|EFH29896.1| tRNA-specific adenosine deaminase [Lactobacillus jensenii JV-V16]
          Length = 174

 Score = 94.7 bits (234), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 49/131 (37%), Positives = 79/131 (60%), Gaps = 3/131 (2%)

Query: 21  RNEIPVGAVAV-LNNKIISRAGNRNRELKDV-TAHAEILAIRMGCRILSQEILPEVDLYV 78
           ++E+P+GA+ V    ++I R  NR REL +V T HAEILAI   C+ L+   L +  L+V
Sbjct: 24  QDEVPIGAIVVDPKGQVIGRGYNR-RELDNVATHHAEILAINEACKTLNSWRLIDCSLFV 82

Query: 79  TLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSR 138
           TLEPC MCA AI  AR++ ++YGA + K G   +    + +   +H P++  G+   ++ 
Sbjct: 83  TLEPCAMCAGAIINARLKEVFYGAPDHKAGASGSVVDLFAVEKFNHHPQVIRGLYRDKAS 142

Query: 139 QIIQDFFKERR 149
            ++ +FF+  R
Sbjct: 143 SMLTNFFRTIR 153


>gi|225387328|ref|ZP_03757092.1| hypothetical protein CLOSTASPAR_01081 [Clostridium asparagiforme
           DSM 15981]
 gi|225046577|gb|EEG56823.1| hypothetical protein CLOSTASPAR_01081 [Clostridium asparagiforme
           DSM 15981]
          Length = 162

 Score = 94.7 bits (234), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 52/143 (36%), Positives = 78/143 (54%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  A+ +A+ A+   E+P+G V V  +KII+R  NR    ++V +HAEI+AIR  C+ +
Sbjct: 7   YMKEAVRQAKKASALGEVPIGCVIVYEDKIIARGYNRRMVDQNVLSHAEIIAIRKACKKM 66

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L    LYVTLEPC MCA AI  AR+ ++  G  NPK G   +          +H  
Sbjct: 67  GDWRLENCTLYVTLEPCPMCAGAIVQARVPQVVIGCMNPKAGCAGSVLDMLHEDGFNHQV 126

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E   GI  +    ++++FF+  R
Sbjct: 127 ETKIGILGEECSAMMKEFFRALR 149


>gi|167748009|ref|ZP_02420136.1| hypothetical protein ANACAC_02746 [Anaerostipes caccae DSM 14662]
 gi|167652586|gb|EDR96715.1| hypothetical protein ANACAC_02746 [Anaerostipes caccae DSM 14662]
          Length = 152

 Score = 94.7 bits (234), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 56/149 (37%), Positives = 82/149 (55%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M +   FM  A+++A+ AA   ++P+G V VL+ KII+RA N+  + K   AHAE+LAI 
Sbjct: 1   MNENEKFMKEAIKQAKKAAAIGDVPIGCVIVLDGKIIARAYNQRNKRKTTLAHAELLAIE 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              +      L E  +Y+TLEPC MCA AI  ARI ++  GA NPK G   +        
Sbjct: 61  KASKKTGDWRLEECTMYITLEPCQMCAGAIVQARIPKVVIGAMNPKAGCAGSILNILQRE 120

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  EI  G+  +    ++ DFF++ R
Sbjct: 121 EFNHQAEIESGVLREECSHMMSDFFRQLR 149


>gi|284028320|ref|YP_003378251.1| CMP/dCMP deaminase zinc-binding protein [Kribbella flavida DSM
           17836]
 gi|283807613|gb|ADB29452.1| CMP/dCMP deaminase zinc-binding protein [Kribbella flavida DSM
           17836]
          Length = 144

 Score = 94.7 bits (234), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 54/143 (37%), Positives = 76/143 (53%), Gaps = 1/143 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  AL EA++A    ++P+GAV V    ++I R  N      D TAHAE+LAIR   R +
Sbjct: 1   MELALAEAEHARGSADVPIGAVVVDAGGEVIGRGHNEREATGDPTAHAEVLAIRAAARHV 60

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
            +  L    L VTLEPCTMCA AI L+R+ RL + A + K G + +          +H P
Sbjct: 61  GEWRLTGCTLVVTLEPCTMCAGAIVLSRLDRLVFAAYDEKAGAVGSLWDVVRDRRLNHRP 120

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+  G+    +   ++DFF   R
Sbjct: 121 EVVGGVLADEAGARLRDFFIGHR 143


>gi|251788710|ref|YP_003003431.1| CMP/dCMP deaminase zinc-binding [Dickeya zeae Ech1591]
 gi|247537331|gb|ACT05952.1| CMP/dCMP deaminase zinc-binding [Dickeya zeae Ech1591]
          Length = 168

 Score = 94.7 bits (234), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 54/143 (37%), Positives = 74/143 (51%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  AL  AQ A    E+PVGAV V    +I    NR     D TAHAEI+A++ G + L
Sbjct: 10  WMRHALSLAQRAWDEGEVPVGAVLVQGGNVIGEGWNRPIGRHDPTAHAEIMALQQGGQTL 69

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  LY+TLEPC MCA A+  +RI RL YGA++ K G   +          +H  
Sbjct: 70  QNYRLLDTTLYITLEPCVMCAGAMIHSRISRLVYGAADAKTGAAGSLVDILRHPGINHHI 129

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
            I  G+      +++  FF+ RR
Sbjct: 130 MITDGVLADECAELLSRFFRMRR 152


>gi|291544028|emb|CBL17137.1| tRNA-adenosine deaminase [Ruminococcus sp. 18P13]
          Length = 151

 Score = 94.7 bits (234), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 55/145 (37%), Positives = 78/145 (53%), Gaps = 3/145 (2%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLN--NKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           +M  A+E A+ AA   EIPVGA+ V +   +++ R  NR     D TAHAE+LAIR    
Sbjct: 6   YMRQAMELAEQAAALGEIPVGALVVQDATGEVLGRGYNRREVDHDPTAHAEVLAIRQAAL 65

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
            +    L    LYVTLEPC MC   I  AR+RR+ +GA + K G  ++    + L   +H
Sbjct: 66  AIGSWRLSGCTLYVTLEPCPMCCGTIINARVRRVVFGAYDSKAGSADSVINLFALPY-NH 124

Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149
            P +  G+ E   ++ +Q FF   R
Sbjct: 125 KPAVTGGLLEDACKEQLQRFFSGLR 149


>gi|300691564|ref|YP_003752559.1| tRNA-specific adenosine deaminase [Ralstonia solanacearum PSI07]
 gi|299078624|emb|CBJ51281.1| tRNA-specific adenosine deaminase [Ralstonia solanacearum PSI07]
          Length = 169

 Score = 94.7 bits (234), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 53/148 (35%), Positives = 78/148 (52%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           ++   +M  AL +A+ A    E+PVGAV V  N+I+    N      D +AHAE+ A+R 
Sbjct: 5   ERDGYWMQQALVQARLAWGEGEVPVGAVVVRGNEIVGVGYNAPIGTHDPSAHAEMRALRQ 64

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
               L    LPE +++VTLEPC MCA A+  AR+ R+ YGA +PK G   +    +    
Sbjct: 65  AAVRLGNYRLPECEVFVTLEPCVMCAGAMLHARVARVVYGAPDPKTGAAGSVLDLFAETR 124

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H   I   +  Q    +++ FF ERR
Sbjct: 125 LNHQTAIIGSVLAQECGDMLRAFFAERR 152


>gi|226946009|ref|YP_002801082.1| Cytidine/deoxycytidylate deaminase-like protein [Azotobacter
           vinelandii DJ]
 gi|226720936|gb|ACO80107.1| Cytidine/deoxycytidylate deaminase-like protein [Azotobacter
           vinelandii DJ]
          Length = 158

 Score = 94.7 bits (234), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 56/143 (39%), Positives = 76/143 (53%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  AL  A   A   E+PVGAV V   +I+ R  N     +D +AHAE++AIR     L
Sbjct: 15  FMREALVLAAEGAGLGEVPVGAVLVRGGEIVGRGFNCPISRRDPSAHAEMVAIRAAAAAL 74

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               LP   LYVTLEPC+MCA  I  AR+ R+ +GAS P+ G   +   F+     +H  
Sbjct: 75  DNYRLPGSTLYVTLEPCSMCAGLIVHARVARVVFGASEPRAGVAVSRGDFFAQDFLNHRV 134

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
            I  G+  +    I++ FF+ RR
Sbjct: 135 LIEGGLLAEECGAILKAFFRARR 157


>gi|212634313|ref|YP_002310838.1| cytidine/deoxycytidylate deaminase [Shewanella piezotolerans WP3]
 gi|212555797|gb|ACJ28251.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [Shewanella
           piezotolerans WP3]
          Length = 186

 Score = 94.7 bits (234), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 52/139 (37%), Positives = 75/139 (53%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  A+E A  A  + E+PVGAV V + +++S   N +  L D +AHAE+  IR   ++L
Sbjct: 23  FMKMAMEMAAKAEEKGEVPVGAVLVKDGEVVSAGFNYSIGLHDPSAHAEMQCIRQAGQLL 82

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  LYVTLEPC MCA AI  +RI RL YGA++ K G              +H  
Sbjct: 83  ENYRLLDTTLYVTLEPCAMCAGAIVHSRISRLVYGANDEKTGAAGTVIDIVRHPAFNHQV 142

Query: 127 EIYPGISEQRSRQIIQDFF 145
           E+  G+ ++   + +  FF
Sbjct: 143 EVTAGVRDEACSEQLSAFF 161


>gi|332654745|ref|ZP_08420487.1| cytidine/deoxycytidylate deaminase family protein [Ruminococcaceae
           bacterium D16]
 gi|332516088|gb|EGJ45696.1| cytidine/deoxycytidylate deaminase family protein [Ruminococcaceae
           bacterium D16]
          Length = 152

 Score = 94.7 bits (234), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 54/127 (42%), Positives = 69/127 (54%), Gaps = 1/127 (0%)

Query: 23  EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEP 82
           ++PVG V V + KI+    NR  E  D TAHAE+ AIR  C  L    L    LYVTLEP
Sbjct: 22  DVPVGCVIVKDGKIVGEGRNRREEHGDATAHAELEAIRDACARLGSWRLHGCTLYVTLEP 81

Query: 83  CTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQ 142
           C MCA  I  +RI  + YGA + K G   +    +     HH P IY G  E + ++I+Q
Sbjct: 82  CPMCAGGIINSRIETVRYGARDEKAGCCSSVLNLFEERFNHH-PRIYRGPLEPQCQKILQ 140

Query: 143 DFFKERR 149
           DFF + R
Sbjct: 141 DFFLDLR 147


>gi|299067502|emb|CBJ38701.1| tRNA-specific adenosine deaminase [Ralstonia solanacearum CMR15]
          Length = 183

 Score = 94.7 bits (234), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 53/148 (35%), Positives = 78/148 (52%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           ++   +M  AL +A+ A    E+PVGAV V  N+I+    N      D +AHAE+ A+R 
Sbjct: 17  ERDGYWMQQALVQARLAWGEGEVPVGAVVVRGNEIVGVGYNAPIGTHDPSAHAEMRALRQ 76

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
               L    LPE +++VTLEPC MCA A+  AR+ R+ YGA +PK G   +    +    
Sbjct: 77  AAVRLGNYRLPECEVFVTLEPCVMCAGAMLHARVARVVYGAPDPKTGAAGSVLDLFAETR 136

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H   I   +  Q    +++ FF ERR
Sbjct: 137 LNHQTAIIGSVLAQDCGDMLRAFFAERR 164


>gi|225163582|ref|ZP_03725891.1| CMP/dCMP deaminase zinc-binding [Opitutaceae bacterium TAV2]
 gi|224801817|gb|EEG20104.1| CMP/dCMP deaminase zinc-binding [Opitutaceae bacterium TAV2]
          Length = 202

 Score = 94.7 bits (234), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 52/144 (36%), Positives = 78/144 (54%), Gaps = 1/144 (0%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +MS A  +A +A  R+E+P+G V   + ++I+ A N      D TAHAE+LAI      L
Sbjct: 37  YMSLAYNQAIDAWRRDEVPIGCVIERSGEVIASAHNGVESANDPTAHAEMLAITQAASAL 96

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L E  LYVT EPC MC+ A  ++R++R+ Y   +PK G +   T    L   +H  
Sbjct: 97  GDWRLEECTLYVTKEPCPMCSGATLMSRLKRVCYAVPDPKMGCLGGATDLNALPRVNHHL 156

Query: 127 EIYP-GISEQRSRQIIQDFFKERR 149
            I   G+ E   R ++Q FF+++R
Sbjct: 157 GITAGGVLEDECRVLLQTFFRQKR 180


>gi|308389629|gb|ADO31949.1| cytidine and deoxycytidylate deaminase family protein [Neisseria
           meningitidis alpha710]
          Length = 239

 Score = 94.7 bits (234), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 55/143 (38%), Positives = 79/143 (55%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  AL +A+ +A   EIPVGAV V + KII+ A N      +V+ HAEI A+      +
Sbjct: 95  FMREALRQAEQSAADGEIPVGAVIVSDGKIIASAHNTCIADCNVSCHAEINALAQAGSEM 154

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L   D+Y+TLEPC MCA+A+  ARIRR+ YGA+ PK G   +    +     +   
Sbjct: 155 QNYRLDGCDIYITLEPCAMCASALIQARIRRVIYGAAEPKTGAAGSIVNLFADKRLNTHT 214

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
            I  GI ++  R ++  FF+ +R
Sbjct: 215 AIRGGILQEECRAVLSRFFQNKR 237


>gi|168705456|ref|ZP_02737733.1| cytidine/deoxycytidylate deaminase family protein [Gemmata
           obscuriglobus UQM 2246]
          Length = 167

 Score = 94.7 bits (234), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 54/143 (37%), Positives = 75/143 (52%), Gaps = 1/143 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNN-KIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  AL+EA  AA  +E+PVGA+ V     +I +A N    L D TAHAE++AI      L
Sbjct: 20  MEMALDEAAVAASEDEVPVGALIVHPELGVIGQAHNMRERLNDPTAHAEMIAITQAATAL 79

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  LYVTLEPC MCA  I  AR+  + YG ++PK G      Q  +    +H  
Sbjct: 80  KSWRLEKCILYVTLEPCPMCAGGIVQARVPMVVYGCTDPKAGACHTLFQIASDPRLNHRA 139

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           ++  G+   R    + DFF+ +R
Sbjct: 140 QVVGGVLADRCAAALTDFFRRKR 162


>gi|322690120|ref|YP_004209854.1| cytidine/deoxycytidine deaminase [Bifidobacterium longum subsp.
           infantis 157F]
 gi|320461456|dbj|BAJ72076.1| putative cytidine/deoxycytidine deaminase [Bifidobacterium longum
           subsp. infantis 157F]
          Length = 149

 Score = 94.7 bits (234), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 57/144 (39%), Positives = 76/144 (52%), Gaps = 3/144 (2%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLN--NKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M CALE A  AA   ++PVGAV VL+   +I+ R  N      D  AHAEI+A+R   + 
Sbjct: 7   MRCALELAGQAAAAGDVPVGAV-VLDAAGQIVGRGYNTREADGDPLAHAEIIAMRQAAQA 65

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           L    L +  L VTLEPC MCA A     I  + +GA +PK G   +           HS
Sbjct: 66  LGAWNLADCTLAVTLEPCPMCAGACIQTHIGTIAFGAWDPKLGACGSIWDIPRDPHIGHS 125

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
           PE++ G+ E   + I+ DFF +RR
Sbjct: 126 PEVHGGVLEVECQSILTDFFAQRR 149


>gi|325144274|gb|EGC66579.1| tRNA-specific adenosine deaminase [Neisseria meningitidis
           M01-240013]
          Length = 239

 Score = 94.7 bits (234), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 55/143 (38%), Positives = 79/143 (55%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  AL +A+ +A   EIPVGAV V + KII+ A N      +V+ HAEI A+      +
Sbjct: 95  FMREALRQAEQSAADGEIPVGAVIVSDGKIIASAHNTCIADCNVSCHAEINALAQAGSEM 154

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L   D+Y+TLEPC MCA+A+  ARIRR+ YGA+ PK G   +    +     +   
Sbjct: 155 QNYRLDGCDIYITLEPCAMCASALIQARIRRVIYGAAEPKTGAAGSIVNLFADKRLNTHT 214

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
            I  GI ++  R ++  FF+ +R
Sbjct: 215 AIRGGILQEECRAVLNRFFQNKR 237


>gi|311234063|gb|ADP86917.1| CMP/dCMP deaminase zinc-binding protein [Desulfovibrio vulgaris
           RCH1]
          Length = 214

 Score = 94.7 bits (234), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 56/144 (38%), Positives = 76/144 (52%), Gaps = 1/144 (0%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
            M  AL EA+ A    E+PVGAV V    +II R  NR     D +AHAE++A+RM    
Sbjct: 69  LMDEALAEARLAQAEGEVPVGAVVVDKAGRIIGRGHNRCLRDNDPSAHAEMVALRMAATT 128

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
            +   L    L VTLEPC MCA AI  AR+  + YGA +PK G + +  + +     +H 
Sbjct: 129 TANYRLGGTFLVVTLEPCLMCAGAIVHARVEGVVYGAEDPKAGAVTSCLEAFEQPFLNHR 188

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
           P    G+  +    I++DFF  RR
Sbjct: 189 PWHMGGLRRRACTAILKDFFNGRR 212


>gi|17546170|ref|NP_519572.1| hydrolase [Ralstonia solanacearum GMI1000]
 gi|17428466|emb|CAD15153.1| putative cytosine/adenosine deaminase protein [Ralstonia
           solanacearum GMI1000]
          Length = 183

 Score = 94.7 bits (234), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 53/148 (35%), Positives = 78/148 (52%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           ++   +M  AL +A+ A    E+PVGAV V  N+I+    N      D +AHAE+ A+R 
Sbjct: 17  ERDGYWMQQALVQARLAWGEGEVPVGAVVVRGNEIVGVGYNAPIGTHDPSAHAEMRALRQ 76

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
               L    LPE +++VTLEPC MCA A+  AR+ R+ YGA +PK G   +    +    
Sbjct: 77  AAVRLGNYRLPECEVFVTLEPCVMCAGAMLHARVARVVYGAPDPKTGAAGSVLDLFAETR 136

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H   I   +  Q    +++ FF ERR
Sbjct: 137 LNHQTAIIGSVLAQDCGDMLRAFFAERR 164


>gi|289422456|ref|ZP_06424299.1| tRNA-specific adenosine deaminase [Peptostreptococcus anaerobius
           653-L]
 gi|289157028|gb|EFD05650.1| tRNA-specific adenosine deaminase [Peptostreptococcus anaerobius
           653-L]
          Length = 154

 Score = 94.4 bits (233), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 56/143 (39%), Positives = 76/143 (53%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  AL EA+ A    E P+GAV V   +I+ R  N+     +  AHAEI+AI    + L
Sbjct: 6   FMEQALVEARKAYALKETPIGAVIVYQGRIVGRGFNQVELQNNPLAHAEIMAINDAVKNL 65

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
           ++  L +  +YVT+EPC MCA AI+ +RIR LY GA + K   +     F          
Sbjct: 66  ARWRLYDCQMYVTMEPCFMCAGAIANSRIRGLYIGAGHHKNHIVTKHNDFKKEFYTDSKI 125

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
               GI E+   +I+ DFFKERR
Sbjct: 126 NFEIGILEEDCSRILVDFFKERR 148


>gi|50553008|ref|XP_503914.1| YALI0E13728p [Yarrowia lipolytica]
 gi|49649783|emb|CAG79507.1| YALI0E13728p [Yarrowia lipolytica]
          Length = 222

 Score = 94.4 bits (233), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 50/139 (35%), Positives = 79/139 (56%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  ALE+A+ +   NE+PVG V V N K+I+R  N   +    T HAE L I    +  
Sbjct: 11  FMEEALEQAELSLNNNEVPVGCVFVHNGKVIARGMNDTNKSLCGTRHAEFLGIEHILKTH 70

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
           + +I  EVDLYVT+EPC MCA+A+   +I+ +YYG +N + GG  +    ++      + 
Sbjct: 71  TADIFEEVDLYVTVEPCIMCASALRQLKIKCVYYGCANDRFGGCGSVMSIHSDKGVDPTY 130

Query: 127 EIYPGISEQRSRQIIQDFF 145
           + YPG   + +  +++ F+
Sbjct: 131 KAYPGFYREEAIMLLRRFY 149


>gi|326328640|ref|ZP_08194980.1| cytidine and deoxycytidylate deaminase family protein
           [Nocardioidaceae bacterium Broad-1]
 gi|325953601|gb|EGD45601.1| cytidine and deoxycytidylate deaminase family protein
           [Nocardioidaceae bacterium Broad-1]
          Length = 165

 Score = 94.4 bits (233), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 51/143 (35%), Positives = 76/143 (53%), Gaps = 1/143 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  ALEE + A    ++P+GAV V  +  +I R  N      D T HAE++A+R   +  
Sbjct: 11  MRAALEEGRAALATGDVPIGAVVVDPSGAVIGRGRNVREAEADPTGHAEVVALREAAKAR 70

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
            +  L    L VTLEPCTMCA A  LAR+ R+ +GA + K G + +          +H P
Sbjct: 71  GEWRLEGCTLVVTLEPCTMCAGAAVLARVERIVFGAFDDKAGAVGSLWDVVRDRRLNHRP 130

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+  G+  +  R +++DFF  +R
Sbjct: 131 EVVAGLLAEEQRALLEDFFGAQR 153


>gi|288554625|ref|YP_003426560.1| CMP/dCMP deaminase zinc-binding protein [Bacillus pseudofirmus OF4]
 gi|288545785|gb|ADC49668.1| CMP/dCMP deaminase zinc-binding protein [Bacillus pseudofirmus OF4]
          Length = 162

 Score = 94.4 bits (233), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 54/143 (37%), Positives = 74/143 (51%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  AL EA  A    E+P+GAV V + ++I+ A NR        AHAE+LAI+  C +L
Sbjct: 8   WMKLALREADAAEQIGEVPIGAVIVKDGEVIAAAHNRRECDHQAIAHAELLAIKEACDVL 67

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L    LYVTLEPC MCA AI  +RI  + YGA++PK G              +H  
Sbjct: 68  GSWRLSGCTLYVTLEPCPMCAGAIVQSRIDLVVYGAADPKAGCAGTLMNLLDDPRFNHRA 127

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+  G  E    + +  FF++ R
Sbjct: 128 EVISGCLETECGERLTAFFRKLR 150


>gi|254672230|emb|CBA05187.1| putative hydrolase protein [Neisseria meningitidis alpha275]
          Length = 197

 Score = 94.4 bits (233), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 55/143 (38%), Positives = 79/143 (55%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  AL +A+ +A   EIPVGAV V + KII+ A N      +V+ HAEI A+      +
Sbjct: 53  FMREALRQAEQSAADGEIPVGAVIVSDGKIIASAHNTCIADCNVSRHAEINALAQAGSEM 112

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L   D+Y+TLEPC MCA+A+  ARIRR+ YGA+ PK G   +    +     +   
Sbjct: 113 QNYRLDGCDIYITLEPCAMCASALIQARIRRVIYGAAEPKTGAAGSIVNLFADKRLNTHT 172

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
            I  GI ++  R ++  FF+ +R
Sbjct: 173 AIRGGILQEECRAVLSRFFQNKR 195


>gi|329897048|ref|ZP_08271820.1| tRNA-specific adenosine-34 deaminase [gamma proteobacterium
           IMCC3088]
 gi|328921488|gb|EGG28874.1| tRNA-specific adenosine-34 deaminase [gamma proteobacterium
           IMCC3088]
          Length = 159

 Score = 94.4 bits (233), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 52/149 (34%), Positives = 80/149 (53%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M +   +M  AL +A+ A    E+PVG V V +  +I+   N      D +AHAEI+A+R
Sbjct: 1   MNEDEYWMRQALLQAEQAYACGEVPVGCVIVRDGSLIASGHNVVISSADPSAHAEIVALR 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
                +    L +  LYVTLEPC MC  A+  AR++RL + A+ PK G + +  +     
Sbjct: 61  HAGSRIGNYRLVDASLYVTLEPCLMCVGAMVHARVQRLIFAATEPKAGAVCSRCEALNFD 120

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  +   G+  Q+S +++  FFKERR
Sbjct: 121 HLNHRVQWQGGVMGQQSSELLSRFFKERR 149


>gi|167752821|ref|ZP_02424948.1| hypothetical protein ALIPUT_01082 [Alistipes putredinis DSM 17216]
 gi|167659890|gb|EDS04020.1| hypothetical protein ALIPUT_01082 [Alistipes putredinis DSM 17216]
          Length = 148

 Score = 94.4 bits (233), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 51/143 (35%), Positives = 76/143 (53%), Gaps = 5/143 (3%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  AL EA+ A    E+P+GAV V + +I+ R  N    L D TAHAE+ A+      +
Sbjct: 10  FMRLALNEAEKALEEQEVPIGAVVVADGRIVGRGHNLVETLADATAHAEMQALTAAASTV 69

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
             + L E  LYVT+EPC MCA AI+ +++ R+ YGA +PK G      Q +   T     
Sbjct: 70  GGKYLSECTLYVTVEPCIMCAGAIAWSQVGRVVYGADDPKRGYRRYSEQVFPPRTT---- 125

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
            +  G+  +   ++++ FF   R
Sbjct: 126 -VTRGVLAEECERLVRSFFAALR 147


>gi|59801336|ref|YP_208048.1| putative cytosine deaminase [Neisseria gonorrhoeae FA 1090]
 gi|194098422|ref|YP_002001481.1| putative cytosine deaminase [Neisseria gonorrhoeae NCCP11945]
 gi|240080887|ref|ZP_04725430.1| putative cytosine deaminase [Neisseria gonorrhoeae FA19]
 gi|240117796|ref|ZP_04731858.1| putative cytosine deaminase [Neisseria gonorrhoeae PID1]
 gi|240125599|ref|ZP_04738485.1| putative cytosine deaminase [Neisseria gonorrhoeae SK-92-679]
 gi|268597004|ref|ZP_06131171.1| cytidine and deoxycytidylate deaminase [Neisseria gonorrhoeae FA19]
 gi|268603495|ref|ZP_06137662.1| cytidine and deoxycytidylate deaminase [Neisseria gonorrhoeae PID1]
 gi|268684187|ref|ZP_06151049.1| cytidine and deoxycytidylate deaminase [Neisseria gonorrhoeae
           SK-92-679]
 gi|59718231|gb|AAW89636.1| putative cytosine deaminase [Neisseria gonorrhoeae FA 1090]
 gi|193933712|gb|ACF29536.1| putative cytosine deaminase [Neisseria gonorrhoeae NCCP11945]
 gi|268550792|gb|EEZ45811.1| cytidine and deoxycytidylate deaminase [Neisseria gonorrhoeae FA19]
 gi|268587626|gb|EEZ52302.1| cytidine and deoxycytidylate deaminase [Neisseria gonorrhoeae PID1]
 gi|268624471|gb|EEZ56871.1| cytidine and deoxycytidylate deaminase [Neisseria gonorrhoeae
           SK-92-679]
          Length = 239

 Score = 94.4 bits (233), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 55/143 (38%), Positives = 79/143 (55%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  AL +A+ +A   EIPVGAV V + KII+ A N      +V+ HAEI A+      +
Sbjct: 95  FMREALRQAEQSAADGEIPVGAVIVSDGKIITSAHNTCIADCNVSRHAEINALAQAGSEM 154

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L   D+Y+TLEPC MCA+A+  ARIRR+ YGA+ PK G   +    +     +   
Sbjct: 155 QNYRLDGCDIYITLEPCAMCASALIQARIRRVIYGAAEPKTGAAGSIVNLFADKRLNTHT 214

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
            I  GI ++  R ++  FF+ +R
Sbjct: 215 AIRGGILQEECRAVLSRFFQNKR 237


>gi|322412766|gb|EFY03674.1| putative cytidine/deoxycytidylate deaminase family protein
           [Streptococcus dysgalactiae subsp. dysgalactiae ATCC
           27957]
          Length = 175

 Score = 94.4 bits (233), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 52/143 (36%), Positives = 78/143 (54%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  AL+EA+ +  + EIP+G V V + +II R  N   E      HAE++AI       
Sbjct: 11  FMQEALKEAEKSLQKAEIPIGCVIVKDGEIIGRGHNAREESNQAIMHAEMMAINEANAHE 70

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  ++VT+EPC MC+ AI LARI  + YGA+N K GG ++  Q  T    +H  
Sbjct: 71  GNWRLLDTTMFVTIEPCVMCSGAIGLARIPHVIYGANNQKFGGTDSLYQILTDERLNHRV 130

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           ++  G+  +    I+Q FF++ R
Sbjct: 131 QVERGLLAEDCANIMQTFFRQGR 153


>gi|124025482|ref|YP_001014598.1| putative cytidine/deoxycytidylate deaminase [Prochlorococcus
           marinus str. NATL1A]
 gi|123960550|gb|ABM75333.1| putative cytidine/deoxycytidylate deaminase [Prochlorococcus
           marinus str. NATL1A]
          Length = 155

 Score = 94.4 bits (233), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 52/144 (36%), Positives = 79/144 (54%), Gaps = 3/144 (2%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNK--IISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M+  L +A+    R E+P+ AV +L+ K   I   GNR   +KD   HAE++A+R    I
Sbjct: 1   MTRLLTKARLVGERGEVPIAAV-ILDKKGRCIGYGGNRRESMKDPLGHAELVALRQASWI 59

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
            +     +  L V LEPC MCA A+  AR+ ++ YG+ +PK G +          + HH 
Sbjct: 60  KNDWRFNDCTLIVNLEPCPMCAGALIQARMGKIIYGSEDPKRGALGGTINLAEHKSAHHR 119

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
             I  GI E+ S++II D+FK++R
Sbjct: 120 LLIEKGIMEEESKKIIVDWFKDKR 143


>gi|15893419|ref|NP_346768.1| cytosine deaminase [Clostridium acetobutylicum ATCC 824]
 gi|15022950|gb|AAK78108.1|AE007525_2 Cytosine deaminase [Clostridium acetobutylicum ATCC 824]
 gi|325507531|gb|ADZ19167.1| Cytosine deaminase [Clostridium acetobutylicum EA 2018]
          Length = 147

 Score = 94.4 bits (233), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 56/145 (38%), Positives = 82/145 (56%), Gaps = 1/145 (0%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           N F++ A++EA+ A    E+PVGAV V +NKII+ + N    LK+ +AHAEI+AI    +
Sbjct: 3   NEFLNEAIKEAKLAKKEGEVPVGAVIVKDNKIIATSHNLKESLKNPSAHAEIIAIERAAK 62

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
            L+   L   ++YVTLEPC MCAA I  +RI ++Y G  +P  G   +           +
Sbjct: 63  YLNNWRLNGCEMYVTLEPCPMCAACICQSRISKVYVGTFDPISGACGSVVNITENDYLRY 122

Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149
             E+    S + S  I++ FFK RR
Sbjct: 123 HTEVEWLYSNECS-DILKGFFKARR 146


>gi|167749860|ref|ZP_02421987.1| hypothetical protein EUBSIR_00828 [Eubacterium siraeum DSM 15702]
 gi|167657172|gb|EDS01302.1| hypothetical protein EUBSIR_00828 [Eubacterium siraeum DSM 15702]
          Length = 150

 Score = 94.4 bits (233), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 55/150 (36%), Positives = 83/150 (55%), Gaps = 2/150 (1%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDV-TAHAEILAI 59
           M     +M+  +E A+ AA + E PVGA+ V  +  I   G   RE + + TAHAEI+AI
Sbjct: 1   MTADEEYMTLCIELAKKAAEKGECPVGAIVVDKDGRIIGEGYNMREAEQMPTAHAEIIAI 60

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
               + ++   L E  LYVTLEPC MCA AI  +RI+RL YGA + KGG   +  + +  
Sbjct: 61  EQAAKAMNSWRLTECTLYVTLEPCPMCAGAIINSRIKRLVYGAFDEKGGACASLMEIFDY 120

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
              +H P +   + +    +++ +FFK+ R
Sbjct: 121 PF-NHRPMVRSRVLQDECAKLLTEFFKDLR 149


>gi|312879894|ref|ZP_07739694.1| tRNA-adenosine deaminase [Aminomonas paucivorans DSM 12260]
 gi|310783185|gb|EFQ23583.1| tRNA-adenosine deaminase [Aminomonas paucivorans DSM 12260]
          Length = 152

 Score = 94.4 bits (233), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 56/142 (39%), Positives = 75/142 (52%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  AL EA+ A    EIPVGAVAV + +I+ R  NR +  +   AHAE+ A+R  C  L 
Sbjct: 1   MGEALAEARLALEEGEIPVGAVAVDHGRIVGRGRNRRKLQEAPFAHAEMEALRDACASLG 60

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
              L  V LYVTLEPC MCA AI   R+ RL +GA +P+ G   +           H   
Sbjct: 61  TWRLDGVTLYVTLEPCPMCAGAILQTRVGRLVFGARDPRAGACGSLVDLLRDPRQTHRCR 120

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
           +  G+  + +  ++ DFF  RR
Sbjct: 121 VREGVGREEAACLLGDFFLLRR 142


>gi|218768019|ref|YP_002342531.1| putative cytosine deaminase [Neisseria meningitidis Z2491]
 gi|121052027|emb|CAM08336.1| putative cytosine deaminase [Neisseria meningitidis Z2491]
          Length = 239

 Score = 94.4 bits (233), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 54/143 (37%), Positives = 79/143 (55%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  AL +A+ +A   EIPVGAV V + KII+ A N      +V+ HAEI A+    R +
Sbjct: 95  FMCEALRQAEQSAADGEIPVGAVIVSDGKIIASAHNTCIADCNVSRHAEINALAQAGREM 154

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L   D+Y+TLEPC MCA+A+  AR++R+ YGA  PK G   +    +     +   
Sbjct: 155 QNYRLDGCDIYITLEPCAMCASALIQARVKRVIYGAGEPKTGAAGSIVNLFADKRLNTHT 214

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
            I  GI ++  R ++  FF+ +R
Sbjct: 215 AIRGGILQEECRAVLSRFFQNKR 237


>gi|292493710|ref|YP_003529149.1| CMP/dCMP deaminase zinc-binding protein [Nitrosococcus halophilus
           Nc4]
 gi|291582305|gb|ADE16762.1| CMP/dCMP deaminase zinc-binding protein [Nitrosococcus halophilus
           Nc4]
          Length = 142

 Score = 94.4 bits (233), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 58/142 (40%), Positives = 76/142 (53%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  AL  A++A  R E+PVGAV V   ++++   N     KD TAHAEI AIR   + L 
Sbjct: 1   MHHALVLARHAEERGEVPVGAVLVQEGEMVAEGWNCPITAKDPTAHAEIQAIRAASQQLG 60

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
              L    LYVTLEPC MCA AI  ARI+R+ +GA +PKGG   +          +H  +
Sbjct: 61  NYRLVGTTLYVTLEPCAMCAGAIIQARIQRVVFGAFDPKGGAAGSVLSILPGDRLNHQVQ 120

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
              GI  +    I+  FF+ RR
Sbjct: 121 CQGGILAEPCGAILSAFFRARR 142


>gi|330991261|ref|ZP_08315212.1| tRNA-specific adenosine deaminase [Gluconacetobacter sp. SXCC-1]
 gi|329761280|gb|EGG77773.1| tRNA-specific adenosine deaminase [Gluconacetobacter sp. SXCC-1]
          Length = 107

 Score = 94.4 bits (233), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 44/101 (43%), Positives = 64/101 (63%)

Query: 49  DVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGG 108
           D +AHAE+  +R   R+     L +  LYVTLEPC MCAAA    R+ R+ +GA +PKGG
Sbjct: 6   DPSAHAEMQVMRAATRLRGGARLVDCTLYVTLEPCPMCAAAAIHFRMGRIVFGAYDPKGG 65

Query: 109 GIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
           G+E+G + +T   C H PE   G+ E+ +  ++QDFF++ R
Sbjct: 66  GVEHGPRLFTHPRCLHRPETVGGVREREAGTLLQDFFRQLR 106


>gi|194366203|ref|YP_002028813.1| CMP/dCMP deaminase zinc-binding [Stenotrophomonas maltophilia
           R551-3]
 gi|194349007|gb|ACF52130.1| CMP/dCMP deaminase zinc-binding [Stenotrophomonas maltophilia
           R551-3]
          Length = 174

 Score = 94.4 bits (233), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 59/147 (40%), Positives = 85/147 (57%), Gaps = 6/147 (4%)

Query: 7   FMSCALEEAQNAALR-NEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           +M  AL  A+ A    +EIPVGAV V  + +++    N N    D +AHAEI+A+R G +
Sbjct: 16  WMRHALALAERAQREFDEIPVGAVLVSADGQLLGEGWNLNIASHDPSAHAEIVAMRSGGK 75

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
           +L+   L    LYVTLEPC MCA AI  AR+ RL YGAS+PK G    G+ F  L    H
Sbjct: 76  LLANHRLLGSTLYVTLEPCAMCAMAIVHARVARLVYGASDPKTGAC--GSVFDLLGDGRH 133

Query: 125 SP--EIYPGISEQRSRQIIQDFFKERR 149
           +   EI+ G+  + +   + ++F+ +R
Sbjct: 134 NHRVEIHGGVLAKEASMRLTNYFRTKR 160


>gi|254804815|ref|YP_003083036.1| probable cytidine deaminase [Neisseria meningitidis alpha14]
 gi|304387765|ref|ZP_07369945.1| tRNA-specific adenosine deaminase [Neisseria meningitidis ATCC
           13091]
 gi|254668357|emb|CBA05413.1| probable cytidine deaminase [Neisseria meningitidis alpha14]
 gi|254671348|emb|CBA08775.1| putative hydrolase protein [Neisseria meningitidis alpha153]
 gi|304338241|gb|EFM04371.1| tRNA-specific adenosine deaminase [Neisseria meningitidis ATCC
           13091]
 gi|319410268|emb|CBY90609.1| K01485 cytosine deaminase [Neisseria meningitidis WUE 2594]
          Length = 239

 Score = 94.0 bits (232), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 55/143 (38%), Positives = 79/143 (55%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  AL +A+ +A   EIPVGAV V + KII+ A N      +V+ HAEI A+      +
Sbjct: 95  FMREALRQAEQSAADGEIPVGAVIVSDGKIIASAHNTCIADCNVSRHAEINALAQAGSEM 154

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L   D+Y+TLEPC MCA+A+  ARIRR+ YGA+ PK G   +    +     +   
Sbjct: 155 QNYRLDGCDIYITLEPCAMCASALIQARIRRVIYGAAEPKTGAAGSIVNLFADKRLNTHT 214

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
            I  GI ++  R ++  FF+ +R
Sbjct: 215 AIRGGILQEECRAVLSRFFQNKR 237


>gi|312959178|ref|ZP_07773697.1| cytidine/deoxycytidylate deaminase family protein [Pseudomonas
           fluorescens WH6]
 gi|311286948|gb|EFQ65510.1| cytidine/deoxycytidylate deaminase family protein [Pseudomonas
           fluorescens WH6]
          Length = 165

 Score = 94.0 bits (232), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 59/143 (41%), Positives = 80/143 (55%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  AL  A   A+  E+PVGAV V + +II R  N      D +AHAE++AIR   R +
Sbjct: 18  FMREALALAAQGAVLGEVPVGAVLVQDGEIIGRGFNCPISGNDPSAHAEMVAIRAAARAI 77

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
           S   L    LYVTLEPC+MCA  I  +RI R+ YGA  PK G +++  QF+T    +H  
Sbjct: 78  SNYRLVGSTLYVTLEPCSMCAGLIVHSRIARVVYGALEPKAGIVQSQGQFFTQGFLNHRV 137

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
               G+  +    ++ +FFK RR
Sbjct: 138 LFEGGVLAEECGTVLSEFFKARR 160


>gi|293399195|ref|ZP_06643360.1| cytosine deaminase [Neisseria gonorrhoeae F62]
 gi|291610609|gb|EFF39719.1| cytosine deaminase [Neisseria gonorrhoeae F62]
          Length = 239

 Score = 94.0 bits (232), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 55/143 (38%), Positives = 79/143 (55%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  AL +A+ +A   EIPVGAV V + KII+ A N      +V+ HAEI A+      +
Sbjct: 95  FMREALRQAEQSAADGEIPVGAVIVSDGKIIASAHNTCIADCNVSRHAEINALAQAGSEM 154

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L   D+Y+TLEPC MCA+A+  ARIRR+ YGA+ PK G   +    +     +   
Sbjct: 155 QNYRLDGCDIYITLEPCAMCASALIQARIRRVIYGATEPKTGAAGSIVNLFADKRLNTHT 214

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
            I  GI ++  R ++  FF+ +R
Sbjct: 215 AIRGGILQEECRAVLSRFFQNKR 237


>gi|34498926|ref|NP_903141.1| cytidine deaminase [Chromobacterium violaceum ATCC 12472]
 gi|34104775|gb|AAQ61132.1| probable cytidine deaminase [Chromobacterium violaceum ATCC 12472]
          Length = 244

 Score = 94.0 bits (232), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 52/143 (36%), Positives = 77/143 (53%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  A + AQ AA   E+PVGA+ V + +II R  N+     D +AHAE+ A+R     L
Sbjct: 96  YMRQARDLAQQAAAEGEVPVGALVVKDGEIIGRGYNQPIGRHDPSAHAEMQALRDAAARL 155

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L   DLYVTLEPC MC+ AI  AR+ R+ YGA++ K G   +    +     +H  
Sbjct: 156 RNYRLDGCDLYVTLEPCPMCSGAILHARVARVIYGAADAKTGAAGSTVDLFADPRLNHHA 215

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
            ++ G+  +     +  FF++RR
Sbjct: 216 AVFGGVEAEACAAQLSAFFRQRR 238


>gi|294787884|ref|ZP_06753128.1| tRNA-specific adenosine deaminase [Simonsiella muelleri ATCC 29453]
 gi|294484177|gb|EFG31860.1| tRNA-specific adenosine deaminase [Simonsiella muelleri ATCC 29453]
          Length = 240

 Score = 94.0 bits (232), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 53/127 (41%), Positives = 68/127 (53%)

Query: 23  EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEP 82
           EIPVGA+ +   KII++A N       V  HAEI  I    +IL    L E DLYVTLEP
Sbjct: 113 EIPVGAILLHQGKIIAQAHNLCVAGHSVCQHAEIQVIEQAGKILQNYRLDECDLYVTLEP 172

Query: 83  CTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQ 142
           C MCA AI  ARIRRL + A  PK G   +    +     +    +  GI    S+ I+Q
Sbjct: 173 CAMCAGAIVQARIRRLIFAAPEPKMGAAGSVLNIFANKRLNSHTAVKSGILADESKAILQ 232

Query: 143 DFFKERR 149
            FF+++R
Sbjct: 233 QFFQQKR 239


>gi|39995176|ref|NP_951127.1| cytidine/deoxycytidylate deaminase family protein [Geobacter
           sulfurreducens PCA]
 gi|39981938|gb|AAR33400.1| cytidine/deoxycytidylate deaminase family protein [Geobacter
           sulfurreducens PCA]
 gi|307634647|gb|ADI82903.2| tRNA (adenosine-34) deaminase [Geobacter sulfurreducens KN400]
          Length = 179

 Score = 94.0 bits (232), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 47/128 (36%), Positives = 70/128 (54%)

Query: 22  NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81
           +E+P+GAV V +  +I R  N      D +AHAE++AIR   R  +   L    LYVTLE
Sbjct: 30  DEVPIGAVIVRDGAVIGRGHNLREGSNDPSAHAEMIAIRQAARRSANWRLTGATLYVTLE 89

Query: 82  PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141
           PC MC  AI LAR+ R+ +G  +PKGG   +          +H   + PG+ ++    ++
Sbjct: 90  PCLMCMGAIILARLERVVFGCYDPKGGAAGSLYDLSADPRLNHQVRLSPGVCQEECGTML 149

Query: 142 QDFFKERR 149
            DFF++ R
Sbjct: 150 SDFFRDLR 157


>gi|239998824|ref|ZP_04718748.1| putative cytosine deaminase [Neisseria gonorrhoeae 35/02]
 gi|240014261|ref|ZP_04721174.1| putative cytosine deaminase [Neisseria gonorrhoeae DGI18]
 gi|240016697|ref|ZP_04723237.1| putative cytosine deaminase [Neisseria gonorrhoeae FA6140]
 gi|240121824|ref|ZP_04734786.1| putative cytosine deaminase [Neisseria gonorrhoeae PID24-1]
 gi|260440688|ref|ZP_05794504.1| putative cytosine deaminase [Neisseria gonorrhoeae DGI2]
 gi|268594667|ref|ZP_06128834.1| cytidine and deoxycytidylate deaminase [Neisseria gonorrhoeae
           35/02]
 gi|291043998|ref|ZP_06569714.1| cytidine and deoxycytidylate deaminase [Neisseria gonorrhoeae DGI2]
 gi|268548056|gb|EEZ43474.1| cytidine and deoxycytidylate deaminase [Neisseria gonorrhoeae
           35/02]
 gi|291012461|gb|EFE04450.1| cytidine and deoxycytidylate deaminase [Neisseria gonorrhoeae DGI2]
 gi|317164113|gb|ADV07654.1| putative cytosine deaminase [Neisseria gonorrhoeae TCDC-NG08107]
          Length = 239

 Score = 94.0 bits (232), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 55/143 (38%), Positives = 79/143 (55%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  AL +A+ +A   EIPVGAV V + KII+ A N      +V+ HAEI A+      +
Sbjct: 95  FMREALRQAEQSAADGEIPVGAVIVSDGKIIASAHNTCIADCNVSRHAEINALAQAGSEM 154

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L   D+Y+TLEPC MCA+A+  ARIRR+ YGA+ PK G   +    +     +   
Sbjct: 155 QNYRLDGCDIYITLEPCAMCASALIQARIRRVIYGAAEPKTGAAGSIVNLFADKRLNTHT 214

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
            I  GI ++  R ++  FF+ +R
Sbjct: 215 AIRGGILQEECRAVLSRFFQNKR 237


>gi|114330609|ref|YP_746831.1| CMP/dCMP deaminase, zinc-binding [Nitrosomonas eutropha C91]
 gi|114307623|gb|ABI58866.1| tRNA-adenosine deaminase [Nitrosomonas eutropha C91]
          Length = 167

 Score = 94.0 bits (232), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 56/143 (39%), Positives = 75/143 (52%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  AL+ A+ A    E+PVGAV V N++I     N    L D TAHAEI+A+R     L
Sbjct: 17  FMRQALDLARVAGDSGEVPVGAVVVRNSQIAGYGYNCPVTLMDPTAHAEIMALRDAANKL 76

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               LPE  LYVTLEPC MC  ++  ARI+RL Y A +PK G   +          +H  
Sbjct: 77  GNYRLPECTLYVTLEPCVMCIGSMFHARIKRLVYAAEDPKTGVCGSLLDLPADTRLNHHL 136

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
            +  G+    +  +++ FF  RR
Sbjct: 137 VVSQGVLADEASTLLKQFFIIRR 159


>gi|149923193|ref|ZP_01911606.1| cytidine and deoxycytidylate deaminase zinc-binding domain protein
           [Plesiocystis pacifica SIR-1]
 gi|149815967|gb|EDM75483.1| cytidine and deoxycytidylate deaminase zinc-binding domain protein
           [Plesiocystis pacifica SIR-1]
          Length = 165

 Score = 94.0 bits (232), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 50/138 (36%), Positives = 72/138 (52%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  A+     AA R ++PVGA+ V + KI+    N   +  D T HAE++A+R  CR   
Sbjct: 1   MRMAMALGAEAATRGDVPVGALVVRDGKILGVGFNTREQDHDPTGHAEVVAMREACRQAR 60

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
           +  L    LYVTLEPC MCA  +   RI RL YGA + K G + +  Q       +H  E
Sbjct: 61  RWRLDGATLYVTLEPCPMCAGTLVNTRIARLVYGAHDAKAGAVRSLYQLCEDPRLNHRLE 120

Query: 128 IYPGISEQRSRQIIQDFF 145
           +  G+  +    +++DFF
Sbjct: 121 VVGGVLAEECAALLKDFF 138


>gi|126668408|ref|ZP_01739365.1| hypothetical protein MELB17_14743 [Marinobacter sp. ELB17]
 gi|126627117|gb|EAZ97757.1| hypothetical protein MELB17_14743 [Marinobacter sp. ELB17]
          Length = 167

 Score = 94.0 bits (232), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 51/127 (40%), Positives = 70/127 (55%)

Query: 23  EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEP 82
           E+PVGAV V++ + +    N+     D TAHAEI A+R     L+   L    LYVTLEP
Sbjct: 31  EVPVGAVVVIDGQEVGAGFNKPISSCDPTAHAEICALRQAATYLNNYRLSGATLYVTLEP 90

Query: 83  CTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQ 142
           CTMC  AI  +RI R+ YGA+ PK G +E+  + +     +   E   G+  +   +II 
Sbjct: 91  CTMCVGAIVHSRISRVVYGATEPKAGAVESARRTFDEPHLNWRVETRGGLLAEPCSRIIS 150

Query: 143 DFFKERR 149
           DFF  RR
Sbjct: 151 DFFSRRR 157


>gi|254429334|ref|ZP_05043041.1| Cytidine and deoxycytidylate deaminase zinc-binding region domain
           protein [Alcanivorax sp. DG881]
 gi|196195503|gb|EDX90462.1| Cytidine and deoxycytidylate deaminase zinc-binding region domain
           protein [Alcanivorax sp. DG881]
          Length = 150

 Score = 94.0 bits (232), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 50/127 (39%), Positives = 75/127 (59%)

Query: 23  EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEP 82
           E+PVGA+ V +N+++ +  N+     D +AHAEI+A+R   +      L    LYVTLEP
Sbjct: 22  EVPVGALVVRDNRLLGKGYNQPIIASDPSAHAEIVAMRSAAQAERNYRLSGSTLYVTLEP 81

Query: 83  CTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQ 142
           CTMC  A+  ARI RL YGAS P+ G  E+  Q  ++   +H  ++  G+  + S  +++
Sbjct: 82  CTMCFGAMVHARIGRLVYGASEPRAGVCESQLQLPSVDFYNHRMDVEGGVLAEESALLLK 141

Query: 143 DFFKERR 149
            FF ERR
Sbjct: 142 GFFAERR 148


>gi|302342017|ref|YP_003806546.1| CMP/dCMP deaminase zinc-binding protein [Desulfarculus baarsii DSM
           2075]
 gi|301638630|gb|ADK83952.1| CMP/dCMP deaminase zinc-binding protein [Desulfarculus baarsii DSM
           2075]
          Length = 171

 Score = 94.0 bits (232), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 48/129 (37%), Positives = 72/129 (55%), Gaps = 1/129 (0%)

Query: 22  NEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80
            E P+GAV V    ++++  GNR     D TAHAE+L +R     +    L    LYV+L
Sbjct: 31  GETPIGAVLVDAAGRVLAAHGNRAISHTDPTAHAEMLVLRQAAAAMGNYRLVGSTLYVSL 90

Query: 81  EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140
           EPC MCA AI  AR+RR+ YGA++PK G + +          +H P +  G+  + S  +
Sbjct: 91  EPCPMCAGAIVWARVRRVVYGAADPKAGALGSALDLSRQPGLNHRPIVEGGLLAEESAAL 150

Query: 141 IQDFFKERR 149
           +++FF+ RR
Sbjct: 151 LREFFQSRR 159


>gi|184199963|ref|YP_001854170.1| putative deaminase [Kocuria rhizophila DC2201]
 gi|183580193|dbj|BAG28664.1| putative tRNA-specific adenosine deaminase [Kocuria rhizophila
           DC2201]
          Length = 158

 Score = 94.0 bits (232), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 51/144 (35%), Positives = 75/144 (52%), Gaps = 1/144 (0%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           +M  AL EA   A   ++P+GAV +  + ++I    NR  E  D TAHAE+LA+R     
Sbjct: 15  WMDLALSEAALTAASGDVPIGAVVLDTDGRVIGTGRNRREECGDPTAHAEVLALREAAAH 74

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
             +  L    L VTLEPC MCA A+ LAR+  + +GA +PK G   +          +H 
Sbjct: 75  RGEWRLEGCTLVVTLEPCAMCAGAVVLARVPTVVFGAWDPKAGACGSVFDIVRDPRLNHW 134

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
            E+  G+ E     +++DFF+  R
Sbjct: 135 VEVTGGVREDECAALLRDFFRTHR 158


>gi|297193429|ref|ZP_06910827.1| deaminase [Streptomyces pristinaespiralis ATCC 25486]
 gi|297151779|gb|EDY67096.2| deaminase [Streptomyces pristinaespiralis ATCC 25486]
          Length = 176

 Score = 94.0 bits (232), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 55/144 (38%), Positives = 76/144 (52%), Gaps = 1/144 (0%)

Query: 6   VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELK-DVTAHAEILAIRMGCR 64
           V M  AL EA  AA   ++PVGAV +     I   G+  RE   D TAHAE+LAIR    
Sbjct: 29  VSMRLALGEADRAAQGGDVPVGAVVLSGEGTILAVGHNEREATGDPTAHAEVLAIRRAAA 88

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
           +L +  L    L VTLEPCTMCA A+  +R+ R+ YGA + K G   +          +H
Sbjct: 89  VLGEWRLTGCTLVVTLEPCTMCAGALVQSRVARVVYGARDDKAGAAGSLWDVVRDRRLNH 148

Query: 125 SPEIYPGISEQRSRQIIQDFFKER 148
            PE+  G+  +   + +  FF++R
Sbjct: 149 RPEVVSGVLGEECSKQLTAFFRDR 172


>gi|29830723|ref|NP_825357.1| cytidine/deoxycytidine deaminase [Streptomyces avermitilis MA-4680]
 gi|29607836|dbj|BAC71892.1| putative cytidine/deoxycytidine deaminase [Streptomyces avermitilis
           MA-4680]
          Length = 142

 Score = 94.0 bits (232), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 53/142 (37%), Positives = 75/142 (52%), Gaps = 1/142 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  AL EA  AA   ++PVGAV +  +  +I+R  N      D TAHAE+LA+R     L
Sbjct: 1   MRLALTEAVRAAESADVPVGAVVLAPDGSVIARGHNEREATGDPTAHAEVLAVRRAAERL 60

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
            +  L    L VTLEPCTMCA A+  +R+ R+ YGA + K G   +          +H P
Sbjct: 61  GRWRLSGCTLVVTLEPCTMCAGALVQSRVDRVVYGARDEKAGAAGSLWDVVRDRRLNHRP 120

Query: 127 EIYPGISEQRSRQIIQDFFKER 148
           E+  G+       ++ +FF+ER
Sbjct: 121 EVIEGVLADECAGLLTEFFRER 142


>gi|167623310|ref|YP_001673604.1| zinc-binding CMP/dCMP deaminase [Shewanella halifaxensis HAW-EB4]
 gi|167353332|gb|ABZ75945.1| CMP/dCMP deaminase zinc-binding [Shewanella halifaxensis HAW-EB4]
          Length = 163

 Score = 94.0 bits (232), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 52/142 (36%), Positives = 76/142 (53%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  A++ A  A  + E+PVGAV V + +++S   N +  L D +AHAE+  +R   +I+ 
Sbjct: 1   MKMAMDMAIKAEEKGEVPVGAVLVKDGEVLSAGFNFSIGLHDPSAHAEMQCLRQAGQIMQ 60

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
              L +  LYVTLEPC MCA AI  +RI RL +GA + K G           +  +H  E
Sbjct: 61  NYRLLDTTLYVTLEPCAMCAGAIVHSRIGRLVFGAKDEKTGAAGTVIDIVRHSAFNHQVE 120

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
           +  G+ E    + +  FFK RR
Sbjct: 121 VSSGVLESECSEQLSAFFKRRR 142


>gi|153813521|ref|ZP_01966189.1| hypothetical protein RUMOBE_03942 [Ruminococcus obeum ATCC 29174]
 gi|149830392|gb|EDM85484.1| hypothetical protein RUMOBE_03942 [Ruminococcus obeum ATCC 29174]
          Length = 164

 Score = 94.0 bits (232), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 51/142 (35%), Positives = 76/142 (53%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  A+ +A+ A    E+P+G V V + KII+R  NR    K+  +HAE+ AIR   + L 
Sbjct: 1   MKEAIRQAKKARALEEVPIGCVIVSDGKIIARGYNRRNTDKNTLSHAELNAIRKASKKLG 60

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
              L    +YVTLEPC MCA A+  +RI  +  G+ NPK G   +      +   +H  +
Sbjct: 61  DWRLEGCTMYVTLEPCQMCAGALVQSRIDEVVIGSMNPKAGCAGSVLNLLQVDNFNHQVK 120

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
           I  G+ E+    ++ DFF+E R
Sbjct: 121 ITRGVLEEECSMMLSDFFRELR 142


>gi|240112750|ref|ZP_04727240.1| putative cytosine deaminase [Neisseria gonorrhoeae MS11]
 gi|240115501|ref|ZP_04729563.1| putative cytosine deaminase [Neisseria gonorrhoeae PID18]
 gi|240123350|ref|ZP_04736306.1| putative cytosine deaminase [Neisseria gonorrhoeae PID332]
 gi|240128054|ref|ZP_04740715.1| putative cytosine deaminase [Neisseria gonorrhoeae SK-93-1035]
 gi|254493609|ref|ZP_05106780.1| cytidine and deoxycytidylate deaminase [Neisseria gonorrhoeae 1291]
 gi|268598817|ref|ZP_06132984.1| cytidine and deoxycytidylate deaminase [Neisseria gonorrhoeae MS11]
 gi|268601174|ref|ZP_06135341.1| cytidine and deoxycytidylate deaminase [Neisseria gonorrhoeae
           PID18]
 gi|268681975|ref|ZP_06148837.1| cytidine and deoxycytidylate deaminase [Neisseria gonorrhoeae
           PID332]
 gi|268686443|ref|ZP_06153305.1| cytidine and deoxycytidylate deaminase [Neisseria gonorrhoeae
           SK-93-1035]
 gi|226512649|gb|EEH61994.1| cytidine and deoxycytidylate deaminase [Neisseria gonorrhoeae 1291]
 gi|268582948|gb|EEZ47624.1| cytidine and deoxycytidylate deaminase [Neisseria gonorrhoeae MS11]
 gi|268585305|gb|EEZ49981.1| cytidine and deoxycytidylate deaminase [Neisseria gonorrhoeae
           PID18]
 gi|268622259|gb|EEZ54659.1| cytidine and deoxycytidylate deaminase [Neisseria gonorrhoeae
           PID332]
 gi|268626727|gb|EEZ59127.1| cytidine and deoxycytidylate deaminase [Neisseria gonorrhoeae
           SK-93-1035]
          Length = 239

 Score = 94.0 bits (232), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 55/143 (38%), Positives = 79/143 (55%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  AL +A+ +A   EIPVGAV V + KII+ A N      +V+ HAEI A+      +
Sbjct: 95  FMREALRQAEQSAADGEIPVGAVIVSDGKIIASAHNTCIADCNVSRHAEINALAQAGSEM 154

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L   D+Y+TLEPC MCA+A+  ARIRR+ YGA+ PK G   +    +     +   
Sbjct: 155 QNYRLDGCDIYITLEPCAMCASALIQARIRRVIYGAAEPKTGAAGSIVNLFADKRLNTHT 214

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
            I  GI ++  R ++  FF+ +R
Sbjct: 215 AIRGGILQEECRAVLSRFFQNKR 237


>gi|256852104|ref|ZP_05557491.1| tRNA-adenosine deaminase [Lactobacillus jensenii 27-2-CHN]
 gi|260661326|ref|ZP_05862239.1| tRNA-adenosine deaminase [Lactobacillus jensenii 115-3-CHN]
 gi|282934787|ref|ZP_06340025.1| tRNA-specific adenosine deaminase [Lactobacillus jensenii 208-1]
 gi|256615516|gb|EEU20706.1| tRNA-adenosine deaminase [Lactobacillus jensenii 27-2-CHN]
 gi|260547781|gb|EEX23758.1| tRNA-adenosine deaminase [Lactobacillus jensenii 115-3-CHN]
 gi|281301150|gb|EFA93456.1| tRNA-specific adenosine deaminase [Lactobacillus jensenii 208-1]
          Length = 174

 Score = 94.0 bits (232), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 49/131 (37%), Positives = 78/131 (59%), Gaps = 3/131 (2%)

Query: 21  RNEIPVGAVAV-LNNKIISRAGNRNRELKDV-TAHAEILAIRMGCRILSQEILPEVDLYV 78
           ++E+P+GA+ V    ++I R  NR REL +V T HAEILAI   C+ L+   L    L+V
Sbjct: 24  QDEVPIGAIVVDPKGQVIGRGYNR-RELDNVATHHAEILAINEACKTLNSWRLINCSLFV 82

Query: 79  TLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSR 138
           TLEPC MCA AI  AR++ ++YGA + K G   +    + +   +H P++  G+   ++ 
Sbjct: 83  TLEPCAMCAGAIINARLKEVFYGAPDHKAGASGSVVDLFAVEKFNHHPQVIRGLYRDKAS 142

Query: 139 QIIQDFFKERR 149
            ++ +FF+  R
Sbjct: 143 SMLTNFFRTIR 153


>gi|261380282|ref|ZP_05984855.1| tRNA-specific adenosine deaminase [Neisseria subflava NJ9703]
 gi|284796794|gb|EFC52141.1| tRNA-specific adenosine deaminase [Neisseria subflava NJ9703]
          Length = 240

 Score = 93.6 bits (231), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 50/143 (34%), Positives = 79/143 (55%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  A+E+A+ +A+  E+PVGAV V   + I+   N      +V+ HAEI A+    + L
Sbjct: 95  FMRLAIEQAKQSAVLGEVPVGAVIVYQGEAIAATHNTCIGDHNVSHHAEINALAAAGKTL 154

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L + D+Y+TLEPC+MCA+A+  AR+ R+ YGA+  K G   +    +     +   
Sbjct: 155 QNYRLEDCDVYITLEPCSMCASALIQARVGRVIYGAAEAKTGAAGSVVDLFADKRLNKHT 214

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
            I  GI  +  + ++QDFF  +R
Sbjct: 215 AILGGILAEECQSVLQDFFAAKR 237


>gi|303232398|ref|ZP_07319090.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Atopobium vaginae PB189-T1-4]
 gi|302481482|gb|EFL44550.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Atopobium vaginae PB189-T1-4]
          Length = 164

 Score = 93.6 bits (231), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 57/143 (39%), Positives = 78/143 (54%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  AL EA+ AA  NE+P+GAV V N  II+RA N   E  +   HAE LA++     L
Sbjct: 21  FMRAALAEARAAAAENEVPIGAVVVYNGAIIARAHNTREESTNPAGHAEFLAMQHAAETL 80

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
            +  L    +YVTLEPC MCA  +  ARI R  Y AS+PK G +            +H  
Sbjct: 81  QRWRLFGCTVYVTLEPCLMCAGLMLNARIDRCVYAASDPKAGAVGTLYNVSNDFRLNHKF 140

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
            +  G+ +  + +++QDFF+ RR
Sbjct: 141 MVTTGVLQGEAVELLQDFFRHRR 163


>gi|260906121|ref|ZP_05914443.1| cytidine/deoxycytidine deaminase [Brevibacterium linens BL2]
          Length = 148

 Score = 93.6 bits (231), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 46/129 (35%), Positives = 71/129 (55%), Gaps = 1/129 (0%)

Query: 22  NEIPVGAVAVLNN-KIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80
           +++PVGAV +  N  +I R  NR    +D   HAE++A+R    +  +  L +  L VTL
Sbjct: 15  DDVPVGAVVIDGNGAVIGRGHNRREVDQDPLGHAELMAMRNAAEVTGRWRLDDATLVVTL 74

Query: 81  EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140
           EPC MCA A+  +RI R+ YGA + K G   +           H PE+Y G++  R R++
Sbjct: 75  EPCAMCAGAVVGSRIARVVYGAFDEKAGAAGSVWDLLRDRAALHHPEVYSGVAASRCREL 134

Query: 141 IQDFFKERR 149
           + +FF  +R
Sbjct: 135 LSEFFAAKR 143


>gi|154496071|ref|ZP_02034767.1| hypothetical protein BACCAP_00355 [Bacteroides capillosus ATCC
           29799]
 gi|150274626|gb|EDN01690.1| hypothetical protein BACCAP_00355 [Bacteroides capillosus ATCC
           29799]
          Length = 256

 Score = 93.6 bits (231), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 56/143 (39%), Positives = 81/143 (56%), Gaps = 1/143 (0%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  AL+ A+ A    E+PVG V V   +++ R  NR  E KD  AHAE++AI    + L
Sbjct: 6   YMRQALDLAREAMEAGEVPVGCVVVWEGRVVGRGRNRREENKDALAHAELMAIHEANQTL 65

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L + DLYVTLEPC MCA  I  ARI R++YGA + + G   +    ++ A  +H P
Sbjct: 66  GGWRLHKADLYVTLEPCAMCAGGIVNARIPRVWYGAEDTRFGACGSALDVFS-APLNHRP 124

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           ++  GI  + S  ++Q FF+  R
Sbjct: 125 QVTGGILAEESLALMQQFFQRLR 147


>gi|77166061|ref|YP_344586.1| cytidine/deoxycytidylate deaminase, zinc-binding region
           [Nitrosococcus oceani ATCC 19707]
 gi|254436457|ref|ZP_05049961.1| Cytidine and deoxycytidylate deaminase zinc-binding region domain
           protein [Nitrosococcus oceani AFC27]
 gi|76884375|gb|ABA59056.1| tRNA-adenosine deaminase [Nitrosococcus oceani ATCC 19707]
 gi|207087927|gb|EDZ65202.1| Cytidine and deoxycytidylate deaminase zinc-binding region domain
           protein [Nitrosococcus oceani AFC27]
          Length = 155

 Score = 93.6 bits (231), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 56/143 (39%), Positives = 74/143 (51%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  AL  A+ A    E+PVGAV V   +++ +  N      D TAHAEI AIR   + L
Sbjct: 13  WMHHALALARYAEEAGEVPVGAVVVQEGEMVGKGWNCPINSHDPTAHAEIQAIRAASQKL 72

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L    LYVTLEPC MCA AI  ARI+R+ +GA +PKGG   +          +H  
Sbjct: 73  GNYRLVGTTLYVTLEPCAMCAGAIIQARIQRVVFGAFDPKGGAAGSALNILPGERLNHQV 132

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E   G+  +    I+  FF+ RR
Sbjct: 133 ECQGGVLAESCGAILSAFFRARR 155


>gi|256372768|ref|YP_003110592.1| CMP/dCMP deaminase zinc-binding [Acidimicrobium ferrooxidans DSM
           10331]
 gi|256009352|gb|ACU54919.1| CMP/dCMP deaminase zinc-binding [Acidimicrobium ferrooxidans DSM
           10331]
          Length = 156

 Score = 93.6 bits (231), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 50/143 (34%), Positives = 76/143 (53%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           ++  A   A++AA   E+PVGAV V + +++    N   E +   AHAE+LA+       
Sbjct: 9   WLDVAFGLAEDAARTAEVPVGAVVVRSGRVLGARHNETIERRSSLAHAELLALSDALADA 68

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               +   D+YVTLEPC MCA A+ LAR RR+ + A +PK G   +          +H  
Sbjct: 69  GDGYVLGADVYVTLEPCAMCAGALVLARARRVVFAAWDPKAGACGSLMNIAADPRLNHEL 128

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           EI  G+  +R+  +++ FF ERR
Sbjct: 129 EIVGGVDAERAALLLRRFFSERR 151


>gi|315652559|ref|ZP_07905540.1| cytidine/deoxycytidylate deaminase [Eubacterium saburreum DSM 3986]
 gi|315485188|gb|EFU75589.1| cytidine/deoxycytidylate deaminase [Eubacterium saburreum DSM 3986]
          Length = 157

 Score = 93.6 bits (231), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 44/108 (40%), Positives = 67/108 (62%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M + + F+  A+++A+ A    ++P+G V V  +KII+R  NR  + K   +HAEI+AI+
Sbjct: 1   MYRDDYFLKEAVKQAKKALSIGDVPIGCVIVFEDKIIARGYNRRNKDKSTLSHAEIIAIK 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGG 108
             C+ +    L +  +Y+TLEPC MCA AI  +RI+R   GA NPK G
Sbjct: 61  KACKKMGDWRLEDCTMYITLEPCPMCAGAIVQSRIKRAVLGAMNPKAG 108


>gi|302672151|ref|YP_003832111.1| CMP/dCMP deaminase zinc-binding domain-containing protein
           [Butyrivibrio proteoclasticus B316]
 gi|302396624|gb|ADL35529.1| CMP/dCMP deaminase zinc-binding domain-containing protein
           [Butyrivibrio proteoclasticus B316]
          Length = 190

 Score = 93.6 bits (231), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 52/143 (36%), Positives = 74/143 (51%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  A+ +A+ A +  E+P+G V V   KII R  NR    K   AHAEI AI+   +++
Sbjct: 30  FMKAAITQARKAYVLGEVPIGCVIVYEGKIIGRGYNRRNTDKTTLAHAEITAIKRAGKVI 89

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L    LYVTLEPC MCA AI  ARI  +   A NPK G   +          +H  
Sbjct: 90  GDWRLEGCKLYVTLEPCQMCAGAIVQARIPEVIMAAENPKAGCAGSVLDILNNPGFNHQV 149

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           ++  G+ +    +++++FF E R
Sbjct: 150 QVKRGVLKDECAKMLKEFFVELR 172


>gi|302552546|ref|ZP_07304888.1| deaminase [Streptomyces viridochromogenes DSM 40736]
 gi|302470164|gb|EFL33257.1| deaminase [Streptomyces viridochromogenes DSM 40736]
          Length = 143

 Score = 93.6 bits (231), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 54/143 (37%), Positives = 77/143 (53%), Gaps = 2/143 (1%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELK-DVTAHAEILAIRMGCRI 65
           M  AL+EA  A    ++PVGAV +  +   +  +G+  RE   D TAHAE+LA+R     
Sbjct: 1   MRLALDEAAGAVRGGDVPVGAVVLAPDGTTVLASGHNEREAGGDPTAHAELLALRRAAAE 60

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           L    L    L VTLEPCTMCA AI  +R+ RL YGA + K G + +          +H 
Sbjct: 61  LGTWRLAGCTLVVTLEPCTMCAGAIQQSRVDRLVYGARDEKAGAVGSLWDLVRDRRLNHR 120

Query: 126 PEIYPGISEQRSRQIIQDFFKER 148
           PE+  G+  +   Q++ +FF+ R
Sbjct: 121 PEVIEGVLAEECAQLLTEFFRAR 143


>gi|254513988|ref|ZP_05126049.1| tRNA-specific adenosine deaminase [gamma proteobacterium NOR5-3]
 gi|219676231|gb|EED32596.1| tRNA-specific adenosine deaminase [gamma proteobacterium NOR5-3]
          Length = 150

 Score = 93.6 bits (231), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 53/150 (35%), Positives = 77/150 (51%), Gaps = 1/150 (0%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M   ++FM  AL+ AQ AA R E+PVGAV V  ++I+    N      D TAHAEI A+R
Sbjct: 1   MSAHDLFMLRALDLAQEAASRGEVPVGAVVVEGDRILGEGRNAQIASMDPTAHAEINALR 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
               ++    +P   LYVTLEPC+MC  A+  ARI  + + A  P+ G + +        
Sbjct: 61  AASALVKNYRIPGATLYVTLEPCSMCCGALVHARISTVVFAAREPRAGAVVSTRSLLDET 120

Query: 121 TCHHSPEIYPGISEQ-RSRQIIQDFFKERR 149
             +H       +     S  +++ FF+ERR
Sbjct: 121 AFNHRVAWLEAVEHAPASATLLRSFFRERR 150


>gi|206901944|ref|YP_002250953.1| tRNA-specific adenosine deaminase [Dictyoglomus thermophilum
           H-6-12]
 gi|206741047|gb|ACI20105.1| tRNA-specific adenosine deaminase [Dictyoglomus thermophilum
           H-6-12]
          Length = 156

 Score = 93.6 bits (231), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 56/147 (38%), Positives = 77/147 (52%), Gaps = 6/147 (4%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           + FM  A++EA+ A  + E+PVGAV V N KII R  N     K    HAEI+AI    +
Sbjct: 10  SFFMHEAIKEAEKALKKGEVPVGAVVVFNEKIIGRGYNLRETKKSPILHAEIIAIEKAVK 69

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
            ++   L    LYVTLEPC MC  AI  +RI RL YG  N + G     T+F  +     
Sbjct: 70  KINDWRLYNCTLYVTLEPCIMCFGAILNSRIDRLVYGTENLEEG----FTKFLNVDNYRK 125

Query: 125 SP--EIYPGISEQRSRQIIQDFFKERR 149
               EI  G+ + +   ++++FFK  R
Sbjct: 126 WQLREIISGVEKDKCEALLKEFFKNVR 152


>gi|302325469|gb|ADL24670.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein
           [Fibrobacter succinogenes subsp. succinogenes S85]
          Length = 155

 Score = 93.6 bits (231), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 53/142 (37%), Positives = 74/142 (52%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  AL +AQ A    EIP+G V V +  +I +  N+  +LKD TAHAEI+AI      L 
Sbjct: 1   MRMALRQAQIAFDMKEIPIGCVIVKDGVVIGKGYNQVEQLKDATAHAEIIAIGTAASTLD 60

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
              L    LYVTLEPC MCA AI  +R+ R+ YG+ + + GG        T      + E
Sbjct: 61  NWRLDGCTLYVTLEPCPMCAGAILNSRVSRIVYGSPDSRFGGCGTTIDVITGNALKRAVE 120

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
           +  GI       +++ FF++ R
Sbjct: 121 VTGGILADECLGLLKGFFQQMR 142


>gi|242095760|ref|XP_002438370.1| hypothetical protein SORBIDRAFT_10g014230 [Sorghum bicolor]
 gi|241916593|gb|EER89737.1| hypothetical protein SORBIDRAFT_10g014230 [Sorghum bicolor]
          Length = 1607

 Score = 93.6 bits (231), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 65/167 (38%), Positives = 84/167 (50%), Gaps = 19/167 (11%)

Query: 2    KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
            K   +FM  AL EAQ AA   E+PVGAV V N +II+R  N   +L+D TAHAEI+ IR 
Sbjct: 1407 KVDELFMREALLEAQRAADIWEVPVGAVLVQNGEIIARGCNLVEDLRDSTAHAEIVCIRE 1466

Query: 62   GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFY---- 117
                L    L +  LYVTLEPC MCA AI  ARI  + +GA N   G   +  + +    
Sbjct: 1467 ASNKLKTWRLADTTLYVTLEPCAMCAGAILQARIDTVVWGAPNKLLGADGSWVRLFPGDG 1526

Query: 118  ---TLATCHHSPEIYP------------GISEQRSRQIIQDFFKERR 149
               TL + + S    P            G+      +I+Q FF+ RR
Sbjct: 1527 QTNTLDSTNQSKAAGPVHPFHPKITIRRGVLSTECSEIMQQFFQLRR 1573


>gi|15612596|ref|NP_240899.1| Cu binding protein (Mn oxidation) [Bacillus halodurans C-125]
 gi|10172645|dbj|BAB03752.1| Cu binding protein (Mn oxidation) [Bacillus halodurans C-125]
          Length = 159

 Score = 93.6 bits (231), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 54/150 (36%), Positives = 80/150 (53%), Gaps = 1/150 (0%)

Query: 1   MKKGNVF-MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
           M+K +++ M  AL +A  A    E+P+GAV V +  ++++A N     +   AHAE+LAI
Sbjct: 1   MQKDDLYYMREALVQADEAERLGEVPIGAVIVKDGVVVAKAYNLREINQQAIAHAELLAI 60

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
              C+ L    L    LYVTLEPC MCA AI  +RI R+ YGA++PK G           
Sbjct: 61  EKACKALGTWRLTGCTLYVTLEPCPMCAGAIVQSRIERVVYGATDPKAGCAGTLMNLLNE 120

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
              +H   +  G+ E+   Q +  FF++ R
Sbjct: 121 ERFNHQTIVESGVLEEECSQRLTAFFRKLR 150


>gi|294630214|ref|ZP_06708774.1| cytidine and deoxycytidylate deaminase [Streptomyces sp. e14]
 gi|292833547|gb|EFF91896.1| cytidine and deoxycytidylate deaminase [Streptomyces sp. e14]
          Length = 142

 Score = 93.6 bits (231), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 53/142 (37%), Positives = 77/142 (54%), Gaps = 1/142 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELK-DVTAHAEILAIRMGCRIL 66
           M  AL EA+ A    ++PVGAV +  +  +  AG+  RE   D TAHAE+LAIR     +
Sbjct: 1   MRLALAEARRAVEGGDVPVGAVVLSADGAVLGAGHNEREATGDPTAHAEVLAIRRAAERV 60

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
            +  L    L VTLEPCTMCA A+ L+R+ R+ YGA + K G   +          +H P
Sbjct: 61  GEWRLSGCTLVVTLEPCTMCAGALVLSRVDRVVYGARDEKAGAAGSLWDVVRDRRLNHRP 120

Query: 127 EIYPGISEQRSRQIIQDFFKER 148
           E+  G+  +    ++ +FF+ R
Sbjct: 121 EVIEGVLAEDCAALLTEFFRAR 142


>gi|313885505|ref|ZP_07819255.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Eremococcus coleocola ACS-139-V-Col8]
 gi|312619235|gb|EFR30674.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Eremococcus coleocola ACS-139-V-Col8]
          Length = 175

 Score = 93.6 bits (231), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 51/144 (35%), Positives = 73/144 (50%)

Query: 6   VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
            +M  AL+EA  A + +E+P+GAV V   +I+ R  N     +    HAE++AI    + 
Sbjct: 17  TWMQEALKEADKALVLDEVPIGAVLVYQGQIVGRGHNVRESQERALGHAELMAIETANQQ 76

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           L    L E  LYVTLEPC MCA A+   RI+ + YGAS+ K G              +H 
Sbjct: 77  LGHWRLEEASLYVTLEPCPMCAGALMNCRIKEVIYGASDLKAGCAGTLMNLLEEDRFNHR 136

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
            ++  G+ EQ     +  FFK+ R
Sbjct: 137 AQVIQGVLEQECSHKLSQFFKDLR 160


>gi|253998683|ref|YP_003050746.1| CMP/dCMP deaminase zinc-binding [Methylovorus sp. SIP3-4]
 gi|253985362|gb|ACT50219.1| CMP/dCMP deaminase zinc-binding [Methylovorus sp. SIP3-4]
          Length = 175

 Score = 93.6 bits (231), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 53/128 (41%), Positives = 67/128 (52%)

Query: 22  NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81
            E+PVGA+ VL+ KII R  N      D TAHAEI A+R     +    L    LYVTLE
Sbjct: 34  GEVPVGALVVLDGKIIGRGMNAPIGSHDPTAHAEIQAMREAAAAIGNYRLVGCTLYVTLE 93

Query: 82  PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141
           PC MC+ AI  ARI RL YGA +PK G   +       +  +H  E+  GI  +    ++
Sbjct: 94  PCAMCSGAIQHARIARLVYGARDPKTGSCGSVIDLMAESRLNHHTEVAGGILAEECGSML 153

Query: 142 QDFFKERR 149
             FF  RR
Sbjct: 154 SRFFSARR 161


>gi|296314748|ref|ZP_06864689.1| tRNA-specific adenosine deaminase [Neisseria polysaccharea ATCC
           43768]
 gi|296838389|gb|EFH22327.1| tRNA-specific adenosine deaminase [Neisseria polysaccharea ATCC
           43768]
          Length = 239

 Score = 93.6 bits (231), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 54/143 (37%), Positives = 79/143 (55%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  AL +A+ +A   EIPVGAV V + KII+ A N      +V+ HAEI A+      +
Sbjct: 95  FMREALRQAEQSAADGEIPVGAVIVSDGKIIASAHNTCIADCNVSCHAEINALAQAGSEM 154

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L   D+Y+TLEPC MCA+A+  ARI+R+ YGA+ PK G   +    +     +   
Sbjct: 155 QNYRLDGCDIYITLEPCAMCASALIQARIKRVIYGAAEPKTGAAGSIVNLFADKRLNTHT 214

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
            I  GI ++  R ++  FF+ +R
Sbjct: 215 AIRGGILQEECRAVLSRFFQNKR 237


>gi|160900241|ref|YP_001565823.1| CMP/dCMP deaminase [Delftia acidovorans SPH-1]
 gi|160365825|gb|ABX37438.1| CMP/dCMP deaminase zinc-binding [Delftia acidovorans SPH-1]
          Length = 475

 Score = 93.6 bits (231), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 48/127 (37%), Positives = 70/127 (55%)

Query: 23  EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEP 82
           E+PVGAV V +  I+ +  N      D TAHAE+LA+R     L    L +  LYVTLEP
Sbjct: 52  EVPVGAVIVKDGAIVGQGRNAPVAQGDPTAHAEVLALRDAAARLGNYRLDDCTLYVTLEP 111

Query: 83  CTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQ 142
           CTMC+ A+  AR+ R+ YGA+ P+ G   +    + L   +H  ++  G+       ++ 
Sbjct: 112 CTMCSGAMLHARLGRVVYGAAEPRTGAAGSVLDVFALPQINHHTQVTRGVLAGECAALMS 171

Query: 143 DFFKERR 149
           DFF+ RR
Sbjct: 172 DFFRTRR 178


>gi|261377687|ref|ZP_05982260.1| tRNA-specific adenosine deaminase [Neisseria cinerea ATCC 14685]
 gi|269145955|gb|EEZ72373.1| tRNA-specific adenosine deaminase [Neisseria cinerea ATCC 14685]
          Length = 239

 Score = 93.2 bits (230), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 55/143 (38%), Positives = 79/143 (55%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  AL +A+ +AL  EIPVGAV V + KII+ A N      +V+ HAEI A+      +
Sbjct: 95  FMRQALVQAEMSALMGEIPVGAVIVSDGKIIASAHNTCIADCNVSRHAEINALAQASSEM 154

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L   D+Y+TLEPC MCA+A+  ARI+R+ YGA  PK G   +    +     +   
Sbjct: 155 QNYRLDGCDIYITLEPCAMCASALIQARIKRVIYGAVEPKTGAAGSIVNLFADKRLNTHT 214

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
            I  GI ++  R ++  FF+ +R
Sbjct: 215 AIRGGILQEECRSVLSCFFQNKR 237


>gi|71280259|ref|YP_270337.1| cytidine/deoxycytidylate deaminase zinc-binding domain-containing
           protein [Colwellia psychrerythraea 34H]
 gi|71145999|gb|AAZ26472.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein
           [Colwellia psychrerythraea 34H]
          Length = 182

 Score = 93.2 bits (230), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 55/140 (39%), Positives = 72/140 (51%)

Query: 6   VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
            FM  A E AQ A   +EIPVGAV V   KII    N++  L D ++HAE+ AIR     
Sbjct: 24  TFMRRAFELAQQAEQHDEIPVGAVVVHQGKIIGEGFNQSIMLNDPSSHAEMNAIRQAGEF 83

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           L+   L +  LYVTLEPC MCA  +  +RI RL Y  S+ K G   +          +H 
Sbjct: 84  LNNYRLLDCTLYVTLEPCPMCAGLLVHSRINRLVYACSDLKTGAAGSAFNLVNNPQLNHQ 143

Query: 126 PEIYPGISEQRSRQIIQDFF 145
            E+   I E+   Q++  FF
Sbjct: 144 LEVCSNILEEECSQLLSAFF 163


>gi|304439146|ref|ZP_07399064.1| tRNA-specific adenosine deaminase [Peptoniphilus duerdenii ATCC
           BAA-1640]
 gi|304372278|gb|EFM25866.1| tRNA-specific adenosine deaminase [Peptoniphilus duerdenii ATCC
           BAA-1640]
          Length = 147

 Score = 93.2 bits (230), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 51/142 (35%), Positives = 71/142 (50%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  AL  A+ +  R EIPVGAV VL+ K++    N    L D T HAE+ A++M  + L 
Sbjct: 1   MKFALHLAKKSYRRGEIPVGAVVVLHGKVVGYGYNLKETLNDATEHAELRALKMAAKTLG 60

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
              L    +Y TLEPC MCA A+ L RI +L  GA +P+ G   +          +H  +
Sbjct: 61  TYHLEGTKMYTTLEPCAMCAGAMILFRIDKLIIGAKSPRMGAAGSNLNILDREGFNHKVK 120

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
           +   I      ++I  FFK  R
Sbjct: 121 VEYSIYGDECSKLISKFFKNVR 142


>gi|260773318|ref|ZP_05882234.1| tRNA-specific adenosine-34 deaminase [Vibrio metschnikovii CIP
           69.14]
 gi|260612457|gb|EEX37660.1| tRNA-specific adenosine-34 deaminase [Vibrio metschnikovii CIP
           69.14]
          Length = 165

 Score = 93.2 bits (230), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 49/126 (38%), Positives = 69/126 (54%)

Query: 24  IPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83
           +PVGAV V + ++I+   NR+    D TAHAEI  +R   + L    L +  LYVTLEPC
Sbjct: 17  VPVGAVLVKDGQVIAEGWNRSIGGHDATAHAEIQVLRQAGQALQNYRLLDTTLYVTLEPC 76

Query: 84  TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQD 143
            MCA A+  +R+ R+ YGA + K G        +     +H   I  G+ E++ R  +Q 
Sbjct: 77  PMCAGALLHSRVARIVYGAPDLKAGAAGTVLNLFASQAAYHYAVIEKGLLEEQCRTQLQA 136

Query: 144 FFKERR 149
           FFK RR
Sbjct: 137 FFKRRR 142


>gi|152989527|ref|YP_001346733.1| hypothetical protein PSPA7_1349 [Pseudomonas aeruginosa PA7]
 gi|150964685|gb|ABR86710.1| conserved hypothetical protein [Pseudomonas aeruginosa PA7]
          Length = 182

 Score = 93.2 bits (230), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 50/126 (39%), Positives = 69/126 (54%)

Query: 24  IPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83
           +PVGAV V   +II R  N+     D +AHAE++AIRM         LP   LYVTLEPC
Sbjct: 48  VPVGAVLVREGEIIGRGFNQPISSHDPSAHAEMVAIRMAAAEAGNYRLPGSTLYVTLEPC 107

Query: 84  TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQD 143
            MC+  +  ARI+RL YG   PK G +E+  +F+     +H   +  G+  +   Q +  
Sbjct: 108 GMCSGLLVHARIQRLVYGTLEPKSGAVESRGRFFEQEHLNHRVMVEGGVLAEECSQALSA 167

Query: 144 FFKERR 149
           FF+ RR
Sbjct: 168 FFRARR 173


>gi|255527107|ref|ZP_05393995.1| CMP/dCMP deaminase zinc-binding [Clostridium carboxidivorans P7]
 gi|296187896|ref|ZP_06856289.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Clostridium carboxidivorans P7]
 gi|255509209|gb|EET85561.1| CMP/dCMP deaminase zinc-binding [Clostridium carboxidivorans P7]
 gi|296047517|gb|EFG86958.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Clostridium carboxidivorans P7]
          Length = 145

 Score = 93.2 bits (230), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 53/143 (37%), Positives = 77/143 (53%), Gaps = 1/143 (0%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  A++EA+ + +  E+PVG V V +N II+RA N    L+D  AHAEILAI+   +  
Sbjct: 4   FMREAIKEAEKSLVLGEVPVGVVIVKDNIIIARAHNLRETLQDTLAHAEILAIKEASQYT 63

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
           +   L    +YVTLEPC MCA AI  +RI  +Y G   P  G   +          +   
Sbjct: 64  NNWRLSGCSMYVTLEPCPMCAGAILQSRISNVYIGTFEPNTGACGSVINILQNDNLNRWT 123

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
            +Y    E+ S  I+++FF ++R
Sbjct: 124 NVYWNYDEKCS-NILEEFFSKKR 145


>gi|297158628|gb|ADI08340.1| cytidine/deoxycytidine deaminase [Streptomyces bingchenggensis
           BCW-1]
          Length = 144

 Score = 93.2 bits (230), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 55/143 (38%), Positives = 75/143 (52%), Gaps = 1/143 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELK-DVTAHAEILAIRMGCRIL 66
           M  ALEEA  A    ++PVGAV +  +      G   RE   D TAHAE+LA+R     L
Sbjct: 1   MRLALEEAARAPETGDVPVGAVVLGPDGSPLGHGRNEREAHGDPTAHAEVLALRDAAGRL 60

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L    L VTLEPCTMCA AI L+R+ R+ YGA++ K G + +          +H P
Sbjct: 61  GSWRLTGCTLVVTLEPCTMCAGAIVLSRVDRVVYGATDDKAGAVGSLWDVVRDRRLNHRP 120

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+ PG+   +   ++  FF+  R
Sbjct: 121 EVVPGVLADQCAALLTAFFRAPR 143


>gi|326335838|ref|ZP_08202017.1| zinc-binding domain protein [Capnocytophaga sp. oral taxon 338 str.
           F0234]
 gi|325691982|gb|EGD33942.1| zinc-binding domain protein [Capnocytophaga sp. oral taxon 338 str.
           F0234]
          Length = 145

 Score = 93.2 bits (230), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 55/149 (36%), Positives = 82/149 (55%), Gaps = 6/149 (4%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M     FM  AL+EA+ A  + E+PVGA+  +N  II++  N    L DVTAHAEI AI 
Sbjct: 1   MLSDTYFMQKALQEAEIAFEQGEVPVGAIITINEIIIAKTHNLTERLGDVTAHAEIQAIT 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
                +  + L    LYVTLEPC MCA A+  ++I ++ Y +++ + G    G       
Sbjct: 61  SASEYMGGKYLTNCTLYVTLEPCVMCAGALYWSQIGKIVYASTDERRGYHLYGN------ 114

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             H   E+  GI E+ S Q+++ FF+++R
Sbjct: 115 LLHPKTEVIHGILEKESSQLLKKFFQQKR 143


>gi|291295391|ref|YP_003506789.1| tRNA(Ile)-lysidine synthetase [Meiothermus ruber DSM 1279]
 gi|290470350|gb|ADD27769.1| tRNA(Ile)-lysidine synthetase [Meiothermus ruber DSM 1279]
          Length = 521

 Score = 93.2 bits (230), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 50/142 (35%), Positives = 80/142 (56%), Gaps = 7/142 (4%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  ALE+A+ A    E+P+GAV V + ++++ A N+  +  D TAHAE+LA++       
Sbjct: 384 MRSALEQARLAQQAGEVPIGAVVVWDGEVLAEAHNQVEQQCDATAHAELLALQQALHKRH 443

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
            ++LP   +YVTLEPC MC  A+  A++RR+ Y   N K G +       T+       E
Sbjct: 444 SKVLPGATVYVTLEPCPMCFGALMEAQVRRVVYAVENLKAGAV-------TVHRMKPPFE 496

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
              G  E+ S ++++DFF ++R
Sbjct: 497 WEGGWLERESAKLLRDFFSQKR 518


>gi|298530999|ref|ZP_07018400.1| CMP/dCMP deaminase zinc-binding [Desulfonatronospira thiodismutans
           ASO3-1]
 gi|298509022|gb|EFI32927.1| CMP/dCMP deaminase zinc-binding [Desulfonatronospira thiodismutans
           ASO3-1]
          Length = 171

 Score = 93.2 bits (230), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 56/146 (38%), Positives = 76/146 (52%), Gaps = 2/146 (1%)

Query: 6   VFMSCALEEAQNAALRNEIPVGAVAVL--NNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
           V M  AL+EA  A  R E+PVGAV       +I++   NR  EL D TAHAEI+A+R   
Sbjct: 24  VLMQEALKEAGKARSRGEVPVGAVLADAGTGEILAGGSNRCIELNDPTAHAEIIALRRAG 83

Query: 64  RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123
           +      LP   L VTLEPC MC  AI+ ARI  L YG  +P  G + +           
Sbjct: 84  QARGNYRLPGTVLAVTLEPCLMCLGAIAQARIDGLVYGPRDPGAGALFSRPDILDFVWLS 143

Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149
           H   I   I +    +++Q+FF+++R
Sbjct: 144 HKFWIVENILKDECLELLQNFFRDKR 169


>gi|198283023|ref|YP_002219344.1| CMP/dCMP deaminase zinc-binding [Acidithiobacillus ferrooxidans
           ATCC 53993]
 gi|218665839|ref|YP_002425229.1| cytidine and deoxycytidylate deaminase family protein
           [Acidithiobacillus ferrooxidans ATCC 23270]
 gi|198247544|gb|ACH83137.1| CMP/dCMP deaminase zinc-binding [Acidithiobacillus ferrooxidans
           ATCC 53993]
 gi|218518052|gb|ACK78638.1| cytidine and deoxycytidylate deaminase family protein
           [Acidithiobacillus ferrooxidans ATCC 23270]
          Length = 177

 Score = 93.2 bits (230), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 54/144 (37%), Positives = 77/144 (53%), Gaps = 1/144 (0%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           +M+ AL+ A  AA + E+PVGAV V +   +++ A N      D +AHAE+  +R   R 
Sbjct: 14  WMALALDYAARAAGQGEVPVGAVLVDVGGHLLAAAHNTPVRDHDPSAHAEMRVLRQAARS 73

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           L    L    LYVTLEPC MC  A+  AR+ RL YGA +PK G +E+          +H 
Sbjct: 74  LQNYRLTGTTLYVTLEPCVMCVGALLHARVARLVYGAPDPKAGAVESLYHLLEDDRFNHR 133

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
                G+    S  +++DFF+ RR
Sbjct: 134 VMAQGGLLAGPSATLLRDFFQARR 157


>gi|225076485|ref|ZP_03719684.1| hypothetical protein NEIFLAOT_01531 [Neisseria flavescens
           NRL30031/H210]
 gi|224952164|gb|EEG33373.1| hypothetical protein NEIFLAOT_01531 [Neisseria flavescens
           NRL30031/H210]
          Length = 240

 Score = 93.2 bits (230), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 51/143 (35%), Positives = 78/143 (54%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  A+E+A+ +A   E+PVGAV V   K I+ A N      +V+ HAEI A+    + L
Sbjct: 95  FMRLAIEQARQSATLGEVPVGAVIVYQGKAIAAAHNTCIGDHNVSHHAEINALAAAGKAL 154

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L + D+Y+TLEPC+MCA+A+  AR+ R+ YGA+  K G   +    +     +   
Sbjct: 155 QNYRLEDCDVYITLEPCSMCASALIQARVGRVIYGAAEAKTGAAGSVVDLFADKRLNKHT 214

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
            I   I  +  + ++QDFF  +R
Sbjct: 215 AILGSILAEECQSVLQDFFAAKR 237


>gi|153815558|ref|ZP_01968226.1| hypothetical protein RUMTOR_01794 [Ruminococcus torques ATCC 27756]
 gi|317502188|ref|ZP_07960362.1| tRNA-specific adenosine deaminase [Lachnospiraceae bacterium
           8_1_57FAA]
 gi|331088753|ref|ZP_08337663.1| hypothetical protein HMPREF1025_01246 [Lachnospiraceae bacterium
           3_1_46FAA]
 gi|145847200|gb|EDK24118.1| hypothetical protein RUMTOR_01794 [Ruminococcus torques ATCC 27756]
 gi|316896397|gb|EFV18494.1| tRNA-specific adenosine deaminase [Lachnospiraceae bacterium
           8_1_57FAA]
 gi|330407276|gb|EGG86779.1| hypothetical protein HMPREF1025_01246 [Lachnospiraceae bacterium
           3_1_46FAA]
          Length = 162

 Score = 93.2 bits (230), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 55/149 (36%), Positives = 78/149 (52%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +K    +M  A+++AQ A   NE P+G V V   KII R  NR    KD  AHAEI AI+
Sbjct: 7   LKLDEKYMRAAIKQAQKAYAINETPIGCVIVYEGKIIGRGYNRRNTDKDPLAHAEIKAIK 66

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              + +    L +  +YVTLEPC MCA AI  +R+ R+  G  NPK G   +      + 
Sbjct: 67  KASKKMGDWRLEQCTMYVTLEPCQMCAGAIIQSRLTRVVVGCMNPKAGCAGSVLNLLDIK 126

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  E+  G+ E+    ++  FF+E R
Sbjct: 127 QFNHQAELTTGVLEEECSALMTGFFRELR 155


>gi|304311855|ref|YP_003811453.1| Cytidine/deoxycytidylate deaminase, zinc-binding protein [gamma
           proteobacterium HdN1]
 gi|301797588|emb|CBL45809.1| Cytidine/deoxycytidylate deaminase, zinc-binding protein [gamma
           proteobacterium HdN1]
          Length = 171

 Score = 93.2 bits (230), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 54/143 (37%), Positives = 75/143 (52%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  AL  A+  A   E+PVGAV V + + I    N      D TAHAEI A+R   R +
Sbjct: 22  WMERALALARQGAEAGEVPVGAVVVRDGEAIGEGFNCPIGTHDPTAHAEICALRAAGRAI 81

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L    LYV+LEPC MCA AI  ARI R+ Y A  PK G + +   F+     ++  
Sbjct: 82  ENYRLAGATLYVSLEPCAMCAGAIVHARIDRVVYAAMEPKAGAVASTQNFFEQPQLNYRV 141

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           +   G+  Q + + ++ FFK+RR
Sbjct: 142 KAEGGLLNQEAGEQLRTFFKDRR 164


>gi|269217562|ref|ZP_06161416.1| tRNA-specific adenosine deaminase [Actinomyces sp. oral taxon 848
           str. F0332]
 gi|269212497|gb|EEZ78837.1| tRNA-specific adenosine deaminase [Actinomyces sp. oral taxon 848
           str. F0332]
          Length = 166

 Score = 92.8 bits (229), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 49/139 (35%), Positives = 73/139 (52%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           ++  A+E A  AAL  ++PVGA+ V  + ++    N      D   HAEI A+R   + +
Sbjct: 26  WIGRAMELADRAALAGDVPVGALVVRGSAVLGVGWNTREARNDPAGHAEIAALREAAQAV 85

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L   DLYVTLEPCTMCA AI  +R+ R+ +GA +PK G   +       A  +H  
Sbjct: 86  GDWRLEGCDLYVTLEPCTMCAGAIVASRVARVVFGAWDPKAGAAGSVRDVLRDARLNHRV 145

Query: 127 EIYPGISEQRSRQIIQDFF 145
           E+  G+ E    + ++ FF
Sbjct: 146 EVVGGVREDECSRQLRAFF 164


>gi|217967615|ref|YP_002353121.1| CMP/dCMP deaminase zinc-binding [Dictyoglomus turgidum DSM 6724]
 gi|217336714|gb|ACK42507.1| CMP/dCMP deaminase zinc-binding [Dictyoglomus turgidum DSM 6724]
          Length = 156

 Score = 92.8 bits (229), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 56/145 (38%), Positives = 77/145 (53%), Gaps = 6/145 (4%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  A++EA+ A  + E+PVGAV V N +I+ R  N     K+  +HAE++AI    + L
Sbjct: 12  FMHEAIKEAKKALRKGEVPVGAVIVYNGQIVGRGYNLRESKKNPISHAEMIAIEKAAKKL 71

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L    LYVTLEPC MC  AI  +RI RL YG  N +    E  TQF  +       
Sbjct: 72  KGWRLCNCTLYVTLEPCIMCFGAILNSRISRLVYGTENRE----EGFTQFVNIRDYKKWK 127

Query: 127 --EIYPGISEQRSRQIIQDFFKERR 149
             EI  GI +     ++++FFK+ R
Sbjct: 128 DIEIISGIKKDVCESLLKEFFKDMR 152


>gi|325191112|emb|CCA25598.1| SUMO ligase putative [Albugo laibachii Nc14]
          Length = 196

 Score = 92.8 bits (229), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 57/147 (38%), Positives = 83/147 (56%), Gaps = 9/147 (6%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  ALEEA+ A +R E+PVG VAV  N+IIS A NR  EL + T HAE++AI     I+
Sbjct: 14  FMREALEEAERALVRGEVPVGCVAVYQNQIISFASNRTNELCNATKHAELVAIDY---IV 70

Query: 67  S-----QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT-LA 120
           S     + I  E   YVT EPC MCAAA+   ++ R+ +G  N + GG  +    +   A
Sbjct: 71  SNYNNTRAIFQETTFYVTCEPCIMCAAALLQCKVVRVVFGCQNFRFGGCGSVLSLHEPTA 130

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKE 147
               +   +PGI    + +++Q F+++
Sbjct: 131 NIPRTFSCHPGILRIEAIELLQRFYEQ 157


>gi|167464544|ref|ZP_02329633.1| possible nucleoside deaminase [Paenibacillus larvae subsp. larvae
           BRL-230010]
          Length = 152

 Score = 92.8 bits (229), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 55/149 (36%), Positives = 75/149 (50%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M++   +M  A+ EA  A   +E+P+GAV V   +II R  N      D TAHAE++AIR
Sbjct: 1   MEEHEQWMQEAISEALKAETIHEVPIGAVIVHEGRIIGRGHNLRETSMDPTAHAEMIAIR 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
                L    L    LYVTLEPC MCA AI  +RI R+ YG  +PK G            
Sbjct: 61  EASEYLRAWRLLNCTLYVTLEPCPMCAGAIVQSRILRVVYGTIDPKAGCAGTLMNLLQED 120

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  E+  GI  +    ++  FF++ R
Sbjct: 121 RFNHRVEVINGILREECSSLLTSFFRKLR 149


>gi|221195061|ref|ZP_03568117.1| tRNA-specific adenosine deaminase [Atopobium rimae ATCC 49626]
 gi|221184964|gb|EEE17355.1| tRNA-specific adenosine deaminase [Atopobium rimae ATCC 49626]
          Length = 198

 Score = 92.8 bits (229), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 52/143 (36%), Positives = 78/143 (54%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  AL EA  AA   E+P+GAV V + ++I+ A NR       +AHAE LA+    R+L
Sbjct: 47  YMRLALSEAAAAAAEGEVPIGAVVVCDGEVIASAHNRREVDNSPSAHAEFLAMEEASRVL 106

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
            +  L    +YVTLEPC MCA  +  +RI R  +GA +PKGG +         +  +H  
Sbjct: 107 KRWRLTGCTVYVTLEPCLMCAGLMVNSRIDRCVFGACDPKGGALGTLYDVSCDSRLNHEF 166

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           ++  G+    +   ++ FF+ERR
Sbjct: 167 QVTSGVLANEAAAQLKAFFRERR 189


>gi|254390387|ref|ZP_05005604.1| deaminase [Streptomyces clavuligerus ATCC 27064]
 gi|197704091|gb|EDY49903.1| deaminase [Streptomyces clavuligerus ATCC 27064]
          Length = 142

 Score = 92.8 bits (229), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 50/128 (39%), Positives = 72/128 (56%), Gaps = 1/128 (0%)

Query: 22  NEIPVGAVAVLNNKIISRAGNRNRELK-DVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80
            ++PVGAV +  +      G+  REL  D TAHAE+LAIR   R +    L +  L VTL
Sbjct: 15  GDVPVGAVVLAADGTRLATGHNERELTGDPTAHAEVLAIRRAARRIGGWRLSDCTLVVTL 74

Query: 81  EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140
           EPCTMCA AI+ +R+ R+ YGA + K G + +          +H PE+  G+ E    ++
Sbjct: 75  EPCTMCAGAITQSRVGRVVYGARDEKAGAVGSLWDVVRDRRLNHRPEVIIGVLEPECARL 134

Query: 141 IQDFFKER 148
           + DFF+ R
Sbjct: 135 MTDFFRHR 142


>gi|330830279|ref|YP_004393231.1| CMP/dCMP deaminase zinc-binding protein [Aeromonas veronii B565]
 gi|328805415|gb|AEB50614.1| CMP/dCMP deaminase zinc-binding protein [Aeromonas veronii B565]
          Length = 201

 Score = 92.8 bits (229), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 53/143 (37%), Positives = 77/143 (53%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  A+  A  A    EIPVGAV VL+ +++    NR+    D  AHAE++AIR   + L
Sbjct: 41  WMRHAMALAARAEGIGEIPVGAVLVLDGQVVGEGWNRSISEHDACAHAEVMAIRAAGKQL 100

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
           +   L +  LYVTLEPC MCA A+  +R++R+ YGA + K G   +  +       +HS 
Sbjct: 101 ANYRLLDTTLYVTLEPCCMCAGALIHSRVKRVVYGARDLKTGAAGSVFEILQDPRHNHSV 160

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+  G+        +  FFK RR
Sbjct: 161 ELIGGVLADACSAQLSAFFKRRR 183


>gi|115468148|ref|NP_001057673.1| Os06g0489500 [Oryza sativa Japonica Group]
 gi|51535686|dbj|BAD37705.1| putative cytosine deaminase [Oryza sativa Japonica Group]
 gi|113595713|dbj|BAF19587.1| Os06g0489500 [Oryza sativa Japonica Group]
          Length = 1590

 Score = 92.8 bits (229), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 64/167 (38%), Positives = 82/167 (49%), Gaps = 19/167 (11%)

Query: 2    KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
            K   +FM  AL EAQ AA   E+PVGAV V N +II+R  N   +L+D TAHAEI+ IR 
Sbjct: 1388 KTDELFMREALHEAQRAADLWEVPVGAVLVQNGEIIARGCNLVEDLRDSTAHAEIVCIRE 1447

Query: 62   GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGG----------GIE 111
                L    L +  LYVTLEPC MCA AI  AR+  + +GA N   G          G  
Sbjct: 1448 ASNKLKTWRLADTTLYVTLEPCAMCAGAILQARVDTVVWGAPNKLLGADGSWVRLFPGDG 1507

Query: 112  NGTQFYTLATCHHSPEIYP---------GISEQRSRQIIQDFFKERR 149
              +   +  T   +  ++P         GI      +I+Q FF  RR
Sbjct: 1508 QTSSLDSANTNQGAGPVHPFHPKISIRRGILSAECSEIMQQFFHLRR 1554


>gi|125555393|gb|EAZ00999.1| hypothetical protein OsI_23033 [Oryza sativa Indica Group]
          Length = 1593

 Score = 92.8 bits (229), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 64/167 (38%), Positives = 82/167 (49%), Gaps = 19/167 (11%)

Query: 2    KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
            K   +FM  AL EAQ AA   E+PVGAV V N +II+R  N   +L+D TAHAEI+ IR 
Sbjct: 1390 KTDELFMREALHEAQRAADLWEVPVGAVLVQNGEIIARGCNLVEDLRDSTAHAEIVCIRE 1449

Query: 62   GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGG----------GIE 111
                L    L +  LYVTLEPC MCA AI  AR+  + +GA N   G          G  
Sbjct: 1450 ASNKLKTWRLADTTLYVTLEPCAMCAGAILQARVDTVVWGAPNKLLGADGSWVRLFPGDG 1509

Query: 112  NGTQFYTLATCHHSPEIYP---------GISEQRSRQIIQDFFKERR 149
              +   +  T   +  ++P         GI      +I+Q FF  RR
Sbjct: 1510 QTSSLDSANTNQGAGPVHPFHPKISIRRGILSAECSEIMQQFFHLRR 1556


>gi|125597284|gb|EAZ37064.1| hypothetical protein OsJ_21407 [Oryza sativa Japonica Group]
          Length = 1528

 Score = 92.8 bits (229), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 64/167 (38%), Positives = 82/167 (49%), Gaps = 19/167 (11%)

Query: 2    KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
            K   +FM  AL EAQ AA   E+PVGAV V N +II+R  N   +L+D TAHAEI+ IR 
Sbjct: 1326 KTDELFMREALHEAQRAADLWEVPVGAVLVQNGEIIARGCNLVEDLRDSTAHAEIVCIRE 1385

Query: 62   GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGG----------GIE 111
                L    L +  LYVTLEPC MCA AI  AR+  + +GA N   G          G  
Sbjct: 1386 ASNKLKTWRLADTTLYVTLEPCAMCAGAILQARVDTVVWGAPNKLLGADGSWVRLFPGDG 1445

Query: 112  NGTQFYTLATCHHSPEIYP---------GISEQRSRQIIQDFFKERR 149
              +   +  T   +  ++P         GI      +I+Q FF  RR
Sbjct: 1446 QTSSLDSANTNQGAGPVHPFHPKISIRRGILSAECSEIMQQFFHLRR 1492


>gi|170725917|ref|YP_001759943.1| zinc-binding CMP/dCMP deaminase [Shewanella woodyi ATCC 51908]
 gi|169811264|gb|ACA85848.1| CMP/dCMP deaminase zinc-binding [Shewanella woodyi ATCC 51908]
          Length = 169

 Score = 92.8 bits (229), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 49/143 (34%), Positives = 77/143 (53%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  A++ A  A  + E+PVGA+ V N+++IS   N      D +AHAE+  +R   +++
Sbjct: 10  YMKLAMDMAAKAEEKGEVPVGAILVKNDEVISAGFNFCIGSHDPSAHAEMQCLRQAGKVI 69

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  LYVTLEPC MCA A+  +R+ RL +GAS+ K G           +  +H  
Sbjct: 70  ENYRLLDTTLYVTLEPCAMCAGAMVHSRVSRLVFGASDAKTGAAGTVIDLVRHSAFNHQL 129

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+  G+ E    + +  FF+ RR
Sbjct: 130 EVTQGVLELECAEQLSQFFRRRR 152


>gi|313200758|ref|YP_004039416.1| cmp/dcmp deaminase zinc-binding protein [Methylovorus sp. MP688]
 gi|312440074|gb|ADQ84180.1| CMP/dCMP deaminase zinc-binding protein [Methylovorus sp. MP688]
          Length = 175

 Score = 92.4 bits (228), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 53/128 (41%), Positives = 66/128 (51%)

Query: 22  NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81
            E+PVGA+ VL+  II R  N      D TAHAEI A+R     +    L    LYVTLE
Sbjct: 34  GEVPVGALVVLDGAIIGRGMNAPIGRHDPTAHAEIQAMREAASAIGNYRLVGCTLYVTLE 93

Query: 82  PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141
           PC MC+ AI  ARI RL YGA +PK G   +          +H  E+  GI  + S  ++
Sbjct: 94  PCAMCSGAIQHARIARLVYGARDPKTGSCGSVIDLMAEPRLNHHTEVAGGILAEESGSML 153

Query: 142 QDFFKERR 149
             FF  RR
Sbjct: 154 SRFFSARR 161


>gi|307610417|emb|CBW99987.1| hypothetical protein LPW_17441 [Legionella pneumophila 130b]
          Length = 147

 Score = 92.4 bits (228), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 56/144 (38%), Positives = 78/144 (54%), Gaps = 3/144 (2%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           +M  A E+A  A    E+PVGAV V  +N+++    N   +  D + HAEI AIR   R 
Sbjct: 6   WMQLAYEQAVIARNEGEVPVGAVLVSKDNQLLGVGRNVIEKSHDPSDHAEIRAIRQASRK 65

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           L+   L +  LYVTLEPC MCA  +  ARI+RL +   + K G    G+ F  L   +HS
Sbjct: 66  LNNHRLLDTTLYVTLEPCVMCAGLMVHARIKRLVFATRDFKAGAA--GSMFNVLHALNHS 123

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
             I  GI +    Q++ DFF++ R
Sbjct: 124 VLIDEGIMQAECSQLLSDFFRKLR 147


>gi|301058427|ref|ZP_07199448.1| cytidine and deoxycytidylate deaminase zinc-binding region [delta
           proteobacterium NaphS2]
 gi|300447483|gb|EFK11227.1| cytidine and deoxycytidylate deaminase zinc-binding region [delta
           proteobacterium NaphS2]
          Length = 159

 Score = 92.4 bits (228), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 57/144 (39%), Positives = 77/144 (53%), Gaps = 1/144 (0%)

Query: 7   FMSCALEEAQNAALRNEIPVGAV-AVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
            M+ AL EA+ A  + E+PVGAV A     I+SRA N+   L D TAHAEILAIR  C I
Sbjct: 1   MMAQALLEAKKAYSKGEVPVGAVLADAQGYILSRAHNQPISLCDPTAHAEILAIRKACSI 60

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
                L    L  T+EPC MC  A   +R+  + +GA + KGG   +          +H 
Sbjct: 61  CGNYRLTRCLLVATIEPCIMCMGAAIHSRVSTVIFGAHDVKGGAAGSLYDLSRDYRLNHR 120

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
            EI  G+ E   R++++ FF+ RR
Sbjct: 121 MEIVSGVREDECRELMRAFFRARR 144


>gi|222153804|ref|YP_002562981.1| deaminase [Streptococcus uberis 0140J]
 gi|222114617|emb|CAR43628.1| putative deaminase [Streptococcus uberis 0140J]
          Length = 167

 Score = 92.4 bits (228), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 53/143 (37%), Positives = 75/143 (52%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  AL+EA+ +  + EIP+G V V   +II R  N   E      HAEI+AI      +
Sbjct: 11  FMREALKEAKKSLDKGEIPIGCVIVKEGRIIGRGHNAREERNQAIMHAEIMAINEANATV 70

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  L+VT+EPC MC+ AI LARI ++ +GA N K GG  +     T    +H  
Sbjct: 71  GNWRLLDTTLFVTIEPCVMCSGAIGLARIPQVIFGAHNQKFGGAGSLYAILTDQRLNHRV 130

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+  G+  +    I+Q FF+  R
Sbjct: 131 ELETGLLAEECAAIMQTFFRAGR 153


>gi|172060929|ref|YP_001808581.1| CMP/dCMP deaminase zinc-binding [Burkholderia ambifaria MC40-6]
 gi|171993446|gb|ACB64365.1| CMP/dCMP deaminase zinc-binding [Burkholderia ambifaria MC40-6]
          Length = 159

 Score = 92.4 bits (228), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 48/124 (38%), Positives = 69/124 (55%)

Query: 22  NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81
            E+PVGAV V  +++I+R  N      D +AHAE+ A+RM  + L    +P  +LYVTLE
Sbjct: 15  GEVPVGAVLVCGDEVIARGFNHPIGGHDPSAHAEMAALRMAAQHLQNYRMPGCELYVTLE 74

Query: 82  PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141
           PC MCA AI  ARI R+ YGA++PK G   +    +     +H  E+  G+        +
Sbjct: 75  PCLMCAGAIMHARIARVVYGAADPKTGACGSVIDAFANPQLNHHTEVTGGVLADECGAAL 134

Query: 142 QDFF 145
           + FF
Sbjct: 135 KSFF 138


>gi|171320346|ref|ZP_02909387.1| CMP/dCMP deaminase zinc-binding [Burkholderia ambifaria MEX-5]
 gi|171094424|gb|EDT39487.1| CMP/dCMP deaminase zinc-binding [Burkholderia ambifaria MEX-5]
          Length = 159

 Score = 92.4 bits (228), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 48/124 (38%), Positives = 69/124 (55%)

Query: 22  NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81
            E+PVGAV V  +++I+R  N      D +AHAE+ A+RM  + L    +P  +LYVTLE
Sbjct: 15  GEVPVGAVLVCGDEVIARGFNHPIGGHDPSAHAEMAALRMAAQHLQNYRMPGCELYVTLE 74

Query: 82  PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141
           PC MCA AI  ARI R+ YGA++PK G   +    +     +H  E+  G+        +
Sbjct: 75  PCLMCAGAIMHARIARVVYGAADPKTGACGSVIDAFANPQLNHHTEVTGGVLADECGAAL 134

Query: 142 QDFF 145
           + FF
Sbjct: 135 KSFF 138


>gi|313472533|ref|ZP_07813023.1| cytidine/deoxycytidylate deaminase family protein [Lactobacillus
           jensenii 1153]
 gi|313448996|gb|EEQ68969.2| cytidine/deoxycytidylate deaminase family protein [Lactobacillus
           jensenii 1153]
          Length = 160

 Score = 92.4 bits (228), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 47/128 (36%), Positives = 78/128 (60%), Gaps = 3/128 (2%)

Query: 24  IPVGAVAVL-NNKIISRAGNRNRELKDV-TAHAEILAIRMGCRILSQEILPEVDLYVTLE 81
           +P+GA+ V  + ++I R  NR REL ++ T HAEILAI   C+ L+   L +  L+VTLE
Sbjct: 27  VPIGAIVVAPDGQVIGRGYNR-RELDNIATHHAEILAINEACKNLNSWRLIDCSLFVTLE 85

Query: 82  PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141
           PC MCA AI  AR++ ++YGA + K G   +    + +   +H P++  G+  +++  ++
Sbjct: 86  PCAMCAGAIINARLKEVFYGAPDHKAGASGSVVDLFAVEKFNHHPQVIRGLYSEKASNML 145

Query: 142 QDFFKERR 149
            +FF+  R
Sbjct: 146 TNFFRAIR 153


>gi|113952793|ref|YP_730770.1| cytidine/deoxycytidylate deaminase family protein [Synechococcus
           sp. CC9311]
 gi|113880144|gb|ABI45102.1| cytidine/deoxycytidylate deaminase family protein [Synechococcus
           sp. CC9311]
          Length = 203

 Score = 92.4 bits (228), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 48/149 (32%), Positives = 81/149 (54%), Gaps = 1/149 (0%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELK-DVTAHAEILAIR 60
           +K   +M   +E A+    R E+PV AV + ++      G   REL  D   HAE++A+R
Sbjct: 37  QKMQAWMGILIERARRFGERGEVPVSAVVLDHHGRCIGHGINQRELHHDPLGHAELMAVR 96

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
             CR+     L +  L VTLEPC MCA A+  AR+ ++ + A++PK G + +     T  
Sbjct: 97  QACRLRGDWRLNDCTLLVTLEPCPMCAGALVQARVGQVIFAATDPKRGAMGSTINLATHI 156

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
           + HH   +  G+  + +++++  +FK+RR
Sbjct: 157 SAHHRMTVIGGVLGEEAKEMLSSWFKQRR 185


>gi|332982859|ref|YP_004464300.1| tRNA-adenosine deaminase [Mahella australiensis 50-1 BON]
 gi|332700537|gb|AEE97478.1| tRNA-adenosine deaminase [Mahella australiensis 50-1 BON]
          Length = 156

 Score = 92.4 bits (228), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 59/143 (41%), Positives = 80/143 (55%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FMS A++EA+ AA   E+P+GAV    ++II R  N+   L D TAHAE+LAIR     +
Sbjct: 11  FMSEAIKEAELAAAEGEVPIGAVVAKGDEIIGRGHNQVEGLHDATAHAEMLAIRQAMAAI 70

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
           +   L   +LY TLEPC MC  A+ L RI +L YGA + K G                + 
Sbjct: 71  NDWRLDGCELYTTLEPCAMCTGAMMLCRIEQLIYGAPDLKWGCAGTLYNLPRDRRFDRNI 130

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           EI  GI EQR  ++++ FF+ RR
Sbjct: 131 EIIAGIGEQRCEEMLKKFFENRR 153


>gi|28895070|ref|NP_801420.1| hypothetical protein SPs0158 [Streptococcus pyogenes SSI-1]
 gi|28810315|dbj|BAC63253.1| conserved hypothetical protein [Streptococcus pyogenes SSI-1]
          Length = 160

 Score = 92.4 bits (228), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 53/142 (37%), Positives = 76/142 (53%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  AL+EA+ +  + EIP+G V V + +II R  N   E      HAE++AI        
Sbjct: 1   MQEALKEAEKSLQKAEIPIGCVIVKDGEIIGRGHNAREESNQAIMHAEMMAINEANAHEG 60

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
              L +  L+VT+EPC MC+ AI LARI  + YGASN K GG ++  Q  T    +H  +
Sbjct: 61  NWRLLDTTLFVTIEPCVMCSGAIGLARIPHVIYGASNQKFGGADSLYQILTDERLNHRVQ 120

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
           +  G+       I+Q FF++ R
Sbjct: 121 VERGLLAADCANIMQTFFRQGR 142


>gi|238855364|ref|ZP_04645676.1| tRNA-specific adenosine deaminase [Lactobacillus jensenii 269-3]
 gi|260664920|ref|ZP_05865771.1| tRNA-adenosine deaminase [Lactobacillus jensenii SJ-7A-US]
 gi|282934594|ref|ZP_06339841.1| tRNA-specific adenosine deaminase [Lactobacillus jensenii 208-1]
 gi|238832025|gb|EEQ24350.1| tRNA-specific adenosine deaminase [Lactobacillus jensenii 269-3]
 gi|260561403|gb|EEX27376.1| tRNA-adenosine deaminase [Lactobacillus jensenii SJ-7A-US]
 gi|281301346|gb|EFA93643.1| tRNA-specific adenosine deaminase [Lactobacillus jensenii 208-1]
          Length = 176

 Score = 92.4 bits (228), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 47/128 (36%), Positives = 78/128 (60%), Gaps = 3/128 (2%)

Query: 24  IPVGAVAVL-NNKIISRAGNRNRELKDV-TAHAEILAIRMGCRILSQEILPEVDLYVTLE 81
           +P+GA+ V  + ++I R  NR REL ++ T HAEILAI   C+ L+   L +  L+VTLE
Sbjct: 27  VPIGAIVVAPDGQVIGRGYNR-RELDNIATHHAEILAINEACKNLNSWRLIDCSLFVTLE 85

Query: 82  PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141
           PC MCA AI  AR++ ++YGA + K G   +    + +   +H P++  G+  +++  ++
Sbjct: 86  PCAMCAGAIINARLKEVFYGAPDHKAGASGSVVDLFAVEKFNHHPQVIRGLYSEKASNML 145

Query: 142 QDFFKERR 149
            +FF+  R
Sbjct: 146 TNFFRAIR 153


>gi|224002957|ref|XP_002291150.1| hypothetical protein THAPSDRAFT_34714 [Thalassiosira pseudonana
           CCMP1335]
 gi|220972926|gb|EED91257.1| hypothetical protein THAPSDRAFT_34714 [Thalassiosira pseudonana
           CCMP1335]
          Length = 171

 Score = 92.4 bits (228), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 57/165 (34%), Positives = 85/165 (51%), Gaps = 23/165 (13%)

Query: 8   MSCALEEAQNAALRNEIPVGAV-------------AVLNN-------KIISRAGNRNREL 47
           M  AL+EAQNA  + E+P+GAV              V+NN       +I+SRA N     
Sbjct: 1   MELALQEAQNAWDKGEVPIGAVIVRELLSNATAGSTVMNNLHATRSFQILSRAHNLVETN 60

Query: 48  KDVTAHAEILAIRMG-CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPK 106
            D ++HAE+LA+R G  ++ +    P   LY TLEPC MC A+I   RI  + YGA++ +
Sbjct: 61  IDASSHAELLALRQGSTKMQNWRFPPNSTLYTTLEPCPMCLASIQAFRIDNIVYGANDNR 120

Query: 107 GGGIENGTQFYTLAT--CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            G +       ++AT   H    +  G+ ++    I+  FF+ERR
Sbjct: 121 LGAVNTHMDLMSVATHPYHEVKSVIGGVRKEECGDILVQFFRERR 165


>gi|283457271|ref|YP_003361841.1| cytosine/adenosine deaminase [Rothia mucilaginosa DY-18]
 gi|283133256|dbj|BAI64021.1| cytosine/adenosine deaminase [Rothia mucilaginosa DY-18]
          Length = 175

 Score = 92.4 bits (228), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 57/146 (39%), Positives = 76/146 (52%), Gaps = 5/146 (3%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNK-IISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           +M+ AL E   A  R EIP+GAV V     II  AGN   +  D +AHAE+ AIR     
Sbjct: 31  WMAHALVEGAAAGERGEIPIGAVVVDEQGVIIGSAGNTREQEHDPSAHAEVNAIRQAAAC 90

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL--ATCH 123
             Q  L    L VT+EPC MCA  I  +R+  + +GA   K G    G+++  L      
Sbjct: 91  RGQWRLDGCTLVVTVEPCLMCAGTILASRVSTVVFGAWEEKTGA--AGSRYDVLRDGRVA 148

Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149
            +PE+Y G+      Q++ DFFKERR
Sbjct: 149 PAPEVYAGVRADECAQLMVDFFKERR 174


>gi|220911573|ref|YP_002486882.1| CMP/dCMP deaminase zinc-binding [Arthrobacter chlorophenolicus A6]
 gi|219858451|gb|ACL38793.1| CMP/dCMP deaminase zinc-binding [Arthrobacter chlorophenolicus A6]
          Length = 168

 Score = 92.4 bits (228), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 51/140 (36%), Positives = 75/140 (53%), Gaps = 12/140 (8%)

Query: 22  NEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEI---------- 70
            ++P+GAV +  + +++    NR  EL D TAHAE++AIR     L +            
Sbjct: 26  GDVPIGAVVLGPDGEVLGAGRNRREELGDPTAHAEVVAIRQAAEQLRERARVGRGLDDGW 85

Query: 71  -LPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIY 129
            L +  L VTLEPC MCA AI LARI R+ +GA + K G   +          +H  E+Y
Sbjct: 86  RLSDCTLVVTLEPCAMCAGAIVLARIPRVVFGAWDEKAGAAGSVFDILRERRLNHWVEVY 145

Query: 130 PGISEQRSRQIIQDFFKERR 149
           PG+ E+ S  +++DFF + R
Sbjct: 146 PGVREEESAVLLRDFFADHR 165


>gi|134096850|ref|YP_001102511.1| CMP/dCMP deaminase, zinc-binding [Saccharopolyspora erythraea NRRL
           2338]
 gi|291005105|ref|ZP_06563078.1| CMP/dCMP deaminase, zinc-binding protein [Saccharopolyspora
           erythraea NRRL 2338]
 gi|133909473|emb|CAL99585.1| CMP/dCMP deaminase, zinc-binding [Saccharopolyspora erythraea NRRL
           2338]
          Length = 155

 Score = 92.4 bits (228), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 52/145 (35%), Positives = 78/145 (53%), Gaps = 2/145 (1%)

Query: 7   FMSCALEEAQNAALRNEIPVGAV-AVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
            +  ALE A  A    ++P+GAV A  + ++++R  NR   L D TAHAEILA+R    +
Sbjct: 11  LVRAALEVAPGALSTGDVPIGAVVAGPDGRVLARDHNRREALHDPTAHAEILALRAAAGV 70

Query: 66  LSQEI-LPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
           L     L    L VT+EPCTMCA A+ LAR+ R+ +G   P+ G + +          +H
Sbjct: 71  LGDGWRLEGCTLAVTVEPCTMCAGALVLARVERVVFGCWEPRTGAVGSLWDVVRDRRLNH 130

Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149
            PE+  G+ E     +++ FF  +R
Sbjct: 131 RPEVVGGVLEAECSALLEAFFHGQR 155


>gi|294813865|ref|ZP_06772508.1| cytidine/deoxycytidine deaminase [Streptomyces clavuligerus ATCC
           27064]
 gi|326442283|ref|ZP_08217017.1| deaminase [Streptomyces clavuligerus ATCC 27064]
 gi|294326464|gb|EFG08107.1| cytidine/deoxycytidine deaminase [Streptomyces clavuligerus ATCC
           27064]
          Length = 199

 Score = 92.4 bits (228), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 50/128 (39%), Positives = 72/128 (56%), Gaps = 1/128 (0%)

Query: 22  NEIPVGAVAVLNNKIISRAGNRNRELK-DVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80
            ++PVGAV +  +      G+  REL  D TAHAE+LAIR   R +    L +  L VTL
Sbjct: 72  GDVPVGAVVLAADGTRLATGHNERELTGDPTAHAEVLAIRRAARRIGGWRLSDCTLVVTL 131

Query: 81  EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140
           EPCTMCA AI+ +R+ R+ YGA + K G + +          +H PE+  G+ E    ++
Sbjct: 132 EPCTMCAGAITQSRVGRVVYGARDEKAGAVGSLWDVVRDRRLNHRPEVIIGVLEPECARL 191

Query: 141 IQDFFKER 148
           + DFF+ R
Sbjct: 192 MTDFFRHR 199


>gi|28493718|ref|NP_787879.1| hypothetical protein TWT751 [Tropheryma whipplei str. Twist]
 gi|28572904|ref|NP_789684.1| hypothetical protein TW763 [Tropheryma whipplei TW08/27]
 gi|28411037|emb|CAD67422.1| conserved hypothetical protein (putative deaminase) [Tropheryma
           whipplei TW08/27]
 gi|28476760|gb|AAO44848.1| unknown [Tropheryma whipplei str. Twist]
          Length = 170

 Score = 92.0 bits (227), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 55/144 (38%), Positives = 77/144 (53%), Gaps = 1/144 (0%)

Query: 7   FMSCALEEAQNAALRNEIPVGAV-AVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
            M  AL  A  A  + EIPVGAV A +N K I+   N+  E KD T HAEI+AIR   ++
Sbjct: 27  IMRKALCLAHAAGEKGEIPVGAVIADVNGKTIAEGFNKREESKDPTDHAEIIAIRKASQM 86

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           L    L  + L+VT+EPCTMCA AI  +RI R+ +GA N K G + +          + +
Sbjct: 87  LKDWRLSGLTLFVTMEPCTMCAGAIVTSRISRVVFGAFNNKTGSVGSRIDILRDEILNTN 146

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
            E+  G+       ++  FF + R
Sbjct: 147 IEVVSGVLISECEGVLAKFFADLR 170


>gi|329930226|ref|ZP_08283839.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Paenibacillus sp. HGF5]
 gi|328935248|gb|EGG31729.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Paenibacillus sp. HGF5]
          Length = 164

 Score = 92.0 bits (227), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 52/143 (36%), Positives = 74/143 (51%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  A+ EA+ A    E+P+GAV V  ++II R  N      D TAHAE++AIR   R L
Sbjct: 19  WMREAIAEARKAEELGEVPIGAVIVRGDEIIGRGYNLRETTYDGTAHAEMVAIREASRHL 78

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  LYVTLEPC MCA AI  +R+ +L YG  +PK G              +H  
Sbjct: 79  GAWRLLDCRLYVTLEPCPMCAGAIVQSRVPQLIYGTGDPKAGCAGTLMNLLQEPRFNHRT 138

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
            +  G+ ++    ++  FF+  R
Sbjct: 139 HVVDGVLQEECASLLTQFFRRLR 161


>gi|42521861|ref|NP_967241.1| cytosine deaminase [Bdellovibrio bacteriovorus HD100]
 gi|39574391|emb|CAE77895.1| Cytosine deaminase [Bdellovibrio bacteriovorus HD100]
          Length = 313

 Score = 92.0 bits (227), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 50/129 (38%), Positives = 68/129 (52%)

Query: 21  RNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80
           R E+PV A+ V    +IS A N     +    HAE+LA+    +      L +  LYVTL
Sbjct: 24  REEVPVAAIVVGPEGMISYAINTRERQQSPLGHAELLALHKASQKRGSWRLSDCTLYVTL 83

Query: 81  EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140
           EPC MCA AI  +RI R+ YGA + K G +E+          +H  E+  GI E    ++
Sbjct: 84  EPCVMCAGAIQQSRIARVVYGAKDVKAGAVESLYHILKDPRLNHQVEVSSGILEDDCSEL 143

Query: 141 IQDFFKERR 149
           +QDFFK RR
Sbjct: 144 LQDFFKGRR 152


>gi|302870406|ref|YP_003839043.1| CMP/dCMP deaminase [Micromonospora aurantiaca ATCC 27029]
 gi|302573265|gb|ADL49467.1| CMP/dCMP deaminase zinc-binding [Micromonospora aurantiaca ATCC
           27029]
          Length = 210

 Score = 92.0 bits (227), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 50/126 (39%), Positives = 72/126 (57%), Gaps = 1/126 (0%)

Query: 22  NEIPVGAVAVLNNKIISRAGNRNRELK-DVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80
           +++PVGAV    +      G   REL  D TAHAE+LA+R   + L +  L +  L VTL
Sbjct: 85  DDVPVGAVLYGPDGTELAIGRNERELTGDPTAHAEVLALRRAAQRLGRWRLDDCTLVVTL 144

Query: 81  EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140
           EPCTMCA AI+LAR+  + +GA  PK G + +           H PE+Y G+ E+ S  +
Sbjct: 145 EPCTMCAGAIALARVSTVVFGAWEPKTGAVGSLWDVLRDRRVTHRPEVYGGVLERESATL 204

Query: 141 IQDFFK 146
           ++ FF+
Sbjct: 205 LRAFFR 210


>gi|313905719|ref|ZP_07839079.1| Cof-like hydrolase [Eubacterium cellulosolvens 6]
 gi|313469426|gb|EFR64768.1| Cof-like hydrolase [Eubacterium cellulosolvens 6]
          Length = 450

 Score = 92.0 bits (227), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 50/143 (34%), Positives = 79/143 (55%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  A+ EA+ AA   E+P+GAV V + +II+R  NR     +  +HAE+ A+R   + L
Sbjct: 301 YMRAAIREAKRAASIGEVPIGAVIVRDGEIIARGYNRRNTDHNTLSHAELNALRKASKKL 360

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L    +YVT+EPC MCA A+  +RI ++  G  +PK G   +      +   +HS 
Sbjct: 361 GDWRLEGCTMYVTMEPCQMCAGALVQSRIDKVVIGCMSPKTGCAGSVMNLMQVPVFNHSV 420

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+  GI E+   +I+ +FF+  R
Sbjct: 421 ELEKGILEEECSRILTEFFENLR 443


>gi|54297635|ref|YP_124004.1| hypothetical protein lpp1686 [Legionella pneumophila str. Paris]
 gi|53751420|emb|CAH12838.1| hypothetical protein lpp1686 [Legionella pneumophila str. Paris]
          Length = 149

 Score = 92.0 bits (227), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 56/144 (38%), Positives = 77/144 (53%), Gaps = 3/144 (2%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           +M  A E+A  A    E+PVGAV V  +N+++    N   +  D + HAEI AIR   R 
Sbjct: 8   WMQLAYEQAVIARNEGEVPVGAVLVSKDNQLLGVGRNVIEKSHDPSDHAEIRAIRQASRK 67

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           L+   L +  LYVTLEPC MCA  +  ARI+RL +   + K G    G+ F  L   +HS
Sbjct: 68  LNNHRLLDTTLYVTLEPCVMCAGLMVHARIKRLVFATRDFKAGAA--GSMFNVLHALNHS 125

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
             I  GI +    Q++ DFF+  R
Sbjct: 126 VLIDEGIMQAECSQLLSDFFRNLR 149


>gi|261403958|ref|YP_003240199.1| CMP/dCMP deaminase zinc-binding protein [Paenibacillus sp.
           Y412MC10]
 gi|261280421|gb|ACX62392.1| CMP/dCMP deaminase zinc-binding protein [Paenibacillus sp.
           Y412MC10]
          Length = 164

 Score = 92.0 bits (227), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 52/143 (36%), Positives = 74/143 (51%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  A+ EA+ A    E+P+GAV V  ++II R  N      D TAHAE++AIR   R L
Sbjct: 19  WMREAIAEARKAEELGEVPIGAVIVRGDEIIGRGYNLRETTYDGTAHAEMVAIREASRHL 78

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  LYVTLEPC MCA AI  +R+ +L YG  +PK G              +H  
Sbjct: 79  GAWRLLDCRLYVTLEPCPMCAGAIVQSRVPQLIYGTGDPKAGCAGTLMNLLQEPRFNHRT 138

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
            +  G+ ++    ++  FF+  R
Sbjct: 139 HVVDGVLQEECASLLTQFFRRLR 161


>gi|148359260|ref|YP_001250467.1| deaminase [Legionella pneumophila str. Corby]
 gi|296107307|ref|YP_003619007.1| Cytosine/adenosine deaminase [Legionella pneumophila 2300/99 Alcoy]
 gi|148281033|gb|ABQ55121.1| deaminase [Legionella pneumophila str. Corby]
 gi|295649208|gb|ADG25055.1| Cytosine/adenosine deaminase [Legionella pneumophila 2300/99 Alcoy]
          Length = 147

 Score = 92.0 bits (227), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 56/144 (38%), Positives = 77/144 (53%), Gaps = 3/144 (2%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           +M  A E+A  A    E+PVGAV V  +N+++    N   +  D + HAEI AIR   R 
Sbjct: 6   WMQLAYEQAVIARNEGEVPVGAVLVSKDNQLLGVGRNVIEKSHDPSDHAEIRAIRQASRK 65

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           L+   L +  LYVTLEPC MCA  +  ARI+RL +   + K G    G+ F  L   +HS
Sbjct: 66  LNNHRLLDTTLYVTLEPCVMCAGLMVHARIKRLVFATRDFKAGAA--GSMFNVLHALNHS 123

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
             I  GI +    Q++ DFF+  R
Sbjct: 124 VLIDEGIMQAECSQLLSDFFRNLR 147


>gi|325191110|emb|CCA25596.1| SUMO ligase putative [Albugo laibachii Nc14]
          Length = 1279

 Score = 92.0 bits (227), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 57/147 (38%), Positives = 83/147 (56%), Gaps = 9/147 (6%)

Query: 7    FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
            FM  ALEEA+ A +R E+PVG VAV  N+IIS A NR  EL + T HAE++AI     I+
Sbjct: 1097 FMREALEEAERALVRGEVPVGCVAVYQNQIISFASNRTNELCNATKHAELVAIDY---IV 1153

Query: 67   S-----QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT-LA 120
            S     + I  E   YVT EPC MCAAA+   ++ R+ +G  N + GG  +    +   A
Sbjct: 1154 SNYNNTRAIFQETTFYVTCEPCIMCAAALLQCKVVRVVFGCQNFRFGGCGSVLSLHEPTA 1213

Query: 121  TCHHSPEIYPGISEQRSRQIIQDFFKE 147
                +   +PGI    + +++Q F+++
Sbjct: 1214 NIPRTFSCHPGILRIEAIELLQRFYEQ 1240


>gi|300853298|ref|YP_003778282.1| tRNA-specific adenosine deaminase [Clostridium ljungdahlii DSM
           13528]
 gi|300433413|gb|ADK13180.1| tRNA-specific adenosine deaminase [Clostridium ljungdahlii DSM
           13528]
          Length = 145

 Score = 92.0 bits (227), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 57/143 (39%), Positives = 77/143 (53%), Gaps = 1/143 (0%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  A+ +A+      E+PVGAV V +N+IIS   N    +  VTAHAE+LAI+    IL
Sbjct: 4   FMLEAIRQAKKGLKLGEVPVGAVIVKDNEIISSCHNLKETVGIVTAHAEMLAIQNASEIL 63

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
           S   L    +YVTLEPC MCA AI   RI +LY G  +P  G   +          +   
Sbjct: 64  SNWRLTGCSMYVTLEPCPMCAGAILQCRINKLYIGTFDPTMGACGSVVNILQNRRLNRWV 123

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           +I    +EQ S ++++ FFK RR
Sbjct: 124 DIQWMYNEQCS-EMLEKFFKSRR 145


>gi|325191115|emb|CCA25601.1| SUMO ligase putative [Albugo laibachii Nc14]
          Length = 1298

 Score = 92.0 bits (227), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 57/147 (38%), Positives = 83/147 (56%), Gaps = 9/147 (6%)

Query: 7    FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
            FM  ALEEA+ A +R E+PVG VAV  N+IIS A NR  EL + T HAE++AI     I+
Sbjct: 1116 FMREALEEAERALVRGEVPVGCVAVYQNQIISFASNRTNELCNATKHAELVAIDY---IV 1172

Query: 67   S-----QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFY-TLA 120
            S     + I  E   YVT EPC MCAAA+   ++ R+ +G  N + GG  +    +   A
Sbjct: 1173 SNYNNTRAIFQETTFYVTCEPCIMCAAALLQCKVVRVVFGCQNFRFGGCGSVLSLHEPTA 1232

Query: 121  TCHHSPEIYPGISEQRSRQIIQDFFKE 147
                +   +PGI    + +++Q F+++
Sbjct: 1233 NIPRTFSCHPGILRIEAIELLQRFYEQ 1259


>gi|325191114|emb|CCA25600.1| SUMO ligase putative [Albugo laibachii Nc14]
          Length = 1287

 Score = 92.0 bits (227), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 57/147 (38%), Positives = 83/147 (56%), Gaps = 9/147 (6%)

Query: 7    FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
            FM  ALEEA+ A +R E+PVG VAV  N+IIS A NR  EL + T HAE++AI     I+
Sbjct: 1105 FMREALEEAERALVRGEVPVGCVAVYQNQIISFASNRTNELCNATKHAELVAIDY---IV 1161

Query: 67   S-----QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFY-TLA 120
            S     + I  E   YVT EPC MCAAA+   ++ R+ +G  N + GG  +    +   A
Sbjct: 1162 SNYNNTRAIFQETTFYVTCEPCIMCAAALLQCKVVRVVFGCQNFRFGGCGSVLSLHEPTA 1221

Query: 121  TCHHSPEIYPGISEQRSRQIIQDFFKE 147
                +   +PGI    + +++Q F+++
Sbjct: 1222 NIPRTFSCHPGILRIEAIELLQRFYEQ 1248


>gi|119775487|ref|YP_928227.1| cytidine/deoxycytidylate deaminase family protein [Shewanella
           amazonensis SB2B]
 gi|119767987|gb|ABM00558.1| tRNA-adenosine deaminase [Shewanella amazonensis SB2B]
          Length = 190

 Score = 92.0 bits (227), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 55/143 (38%), Positives = 77/143 (53%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FMS ALE A+ A  R E+PVGAV V    +I+   N N  L D +AHAE+  +R   R+L
Sbjct: 30  FMSLALEAAKEAEARGEVPVGAVLVREGLVIATGYNHNIGLNDPSAHAEMQCLREAGRML 89

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  LYVTLEPC MCA  +  +RI RL +GA + K G   +          +H  
Sbjct: 90  GNYRLLDTTLYVTLEPCAMCAGVMVHSRIERLVFGAKDEKTGAAGSVVDLVRHPAFNHQI 149

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           ++  G+  +    ++ DFF+ RR
Sbjct: 150 QVEEGVLAEECSGMLSDFFRRRR 172


>gi|315657779|ref|ZP_07910659.1| cytidine/deoxycytidylate deaminase [Mobiluncus curtisii subsp.
           holmesii ATCC 35242]
 gi|315491576|gb|EFU81187.1| cytidine/deoxycytidylate deaminase [Mobiluncus curtisii subsp.
           holmesii ATCC 35242]
          Length = 180

 Score = 92.0 bits (227), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 56/144 (38%), Positives = 76/144 (52%), Gaps = 2/144 (1%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELK--DVTAHAEILAIRMGCRI 65
           +  A   AQ A    +IPVGAV +    I++  G   RE    D +AHAEI+A+R     
Sbjct: 37  LDTAYRLAQKAGRAGDIPVGAVVLTPEGIVAGLGLNQRENPPYDPSAHAEIVALREAAGR 96

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           L +  L    L  TLEPCTMCA AI  ARI RL +GA +PK G   +       +  +H 
Sbjct: 97  LERWNLKGCTLVATLEPCTMCAGAIVNARISRLIFGAWDPKAGACGSIRDVVRDSRLNHQ 156

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
            E+  G+ E R + +++ FF ERR
Sbjct: 157 VEVKGGVDEPRVKALLKAFFGERR 180


>gi|325191109|emb|CCA25595.1| SUMO ligase putative [Albugo laibachii Nc14]
          Length = 1295

 Score = 92.0 bits (227), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 57/147 (38%), Positives = 83/147 (56%), Gaps = 9/147 (6%)

Query: 7    FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
            FM  ALEEA+ A +R E+PVG VAV  N+IIS A NR  EL + T HAE++AI     I+
Sbjct: 1113 FMREALEEAERALVRGEVPVGCVAVYQNQIISFASNRTNELCNATKHAELVAIDY---IV 1169

Query: 67   S-----QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFY-TLA 120
            S     + I  E   YVT EPC MCAAA+   ++ R+ +G  N + GG  +    +   A
Sbjct: 1170 SNYNNTRAIFQETTFYVTCEPCIMCAAALLQCKVVRVVFGCQNFRFGGCGSVLSLHEPTA 1229

Query: 121  TCHHSPEIYPGISEQRSRQIIQDFFKE 147
                +   +PGI    + +++Q F+++
Sbjct: 1230 NIPRTFSCHPGILRIEAIELLQRFYEQ 1256


>gi|127512231|ref|YP_001093428.1| CMP/dCMP deaminase, zinc-binding [Shewanella loihica PV-4]
 gi|126637526|gb|ABO23169.1| tRNA-adenosine deaminase [Shewanella loihica PV-4]
          Length = 178

 Score = 92.0 bits (227), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 51/147 (34%), Positives = 79/147 (53%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
           K   +M  A+  A  A LR E+PVGA+ V ++ +I+   N +    D +AHAE+  IR  
Sbjct: 17  KDEAYMRQAMALAAQAELRGEVPVGALLVKDDSVIATGYNLSICRHDASAHAEMECIRAA 76

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
            +++    L +  LYVTLEPC MCA A+  ARI RL +GA++ K G   +       +  
Sbjct: 77  GQVMENYRLLDTTLYVTLEPCAMCAGAMVHARIGRLVFGAADLKTGAAGSVVDLVRSSAF 136

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H  E+  G+  +   + +  FF+ RR
Sbjct: 137 NHQLEVTAGVLAEDCGEQLSAFFRRRR 163


>gi|325191111|emb|CCA25597.1| SUMO ligase putative [Albugo laibachii Nc14]
          Length = 1290

 Score = 92.0 bits (227), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 57/147 (38%), Positives = 83/147 (56%), Gaps = 9/147 (6%)

Query: 7    FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
            FM  ALEEA+ A +R E+PVG VAV  N+IIS A NR  EL + T HAE++AI     I+
Sbjct: 1108 FMREALEEAERALVRGEVPVGCVAVYQNQIISFASNRTNELCNATKHAELVAIDY---IV 1164

Query: 67   S-----QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFY-TLA 120
            S     + I  E   YVT EPC MCAAA+   ++ R+ +G  N + GG  +    +   A
Sbjct: 1165 SNYNNTRAIFQETTFYVTCEPCIMCAAALLQCKVVRVVFGCQNFRFGGCGSVLSLHEPTA 1224

Query: 121  TCHHSPEIYPGISEQRSRQIIQDFFKE 147
                +   +PGI    + +++Q F+++
Sbjct: 1225 NIPRTFSCHPGILRIEAIELLQRFYEQ 1251


>gi|322383121|ref|ZP_08056948.1| tRNA specific adenosine deaminase-like protein [Paenibacillus
           larvae subsp. larvae B-3650]
 gi|321152783|gb|EFX45409.1| tRNA specific adenosine deaminase-like protein [Paenibacillus
           larvae subsp. larvae B-3650]
          Length = 157

 Score = 91.7 bits (226), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 54/143 (37%), Positives = 72/143 (50%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  A+ EA  A   +E+P+GAV V   +II R  N      D TAHAE++AIR     L
Sbjct: 12  WMQEAISEALKAETIHEVPIGAVIVHEGRIIGRGHNLRETSMDPTAHAEMIAIREASEYL 71

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L    LYVTLEPC MCA AI  +RI R+ YG  +PK G              +H  
Sbjct: 72  RAWRLLNCTLYVTLEPCPMCAGAIVQSRILRVVYGTIDPKAGCAGTLMNLLQEDRFNHRV 131

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+  GI  +    ++  FF++ R
Sbjct: 132 EVINGILREECSSLLTSFFRKLR 154


>gi|315040523|ref|XP_003169639.1| tRNA-specific adenosine deaminase subunit TAD2 [Arthroderma gypseum
           CBS 118893]
 gi|311346329|gb|EFR05532.1| tRNA-specific adenosine deaminase subunit TAD2 [Arthroderma gypseum
           CBS 118893]
          Length = 189

 Score = 91.7 bits (226), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 51/145 (35%), Positives = 75/145 (51%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           + K  VFM  AL  A+ A    E PVG V V  +K+I    N   +  + T HAE LAI 
Sbjct: 7   LSKHEVFMKMALRMAETALAVGETPVGCVLVNKDKVIGSGMNDTNKSLNGTRHAEFLAIE 66

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              R   + IL E DLYVT+EPC MCA+A+   R+R +Y+G +N + GG       ++  
Sbjct: 67  EALRSHPRSILHETDLYVTVEPCIMCASALRQYRVRSVYFGCANERFGGTGGVLSLHSDP 126

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFF 145
                  +Y GI  + +  +++ F+
Sbjct: 127 AIELPYPVYGGIFRKEAIMLLRKFY 151


>gi|241667466|ref|ZP_04755044.1| zinc-binding protein [Francisella philomiragia subsp. philomiragia
           ATCC 25015]
 gi|254876013|ref|ZP_05248723.1| zinc-binding domain-containing protein [Francisella philomiragia
           subsp. philomiragia ATCC 25015]
 gi|254842034|gb|EET20448.1| zinc-binding domain-containing protein [Francisella philomiragia
           subsp. philomiragia ATCC 25015]
          Length = 153

 Score = 91.7 bits (226), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 51/143 (35%), Positives = 78/143 (54%), Gaps = 1/143 (0%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  A E+A  A    E+P+GAV V +N+I+ +  N+   L D TAHAEIL +R   + L
Sbjct: 11  FMQKAYEQALLAYKAGEVPIGAVLVKDNQIVVQDFNKTIMLNDPTAHAEILVLRQAAKEL 70

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L    LYVTLEPC MC   +  AR+  L Y   + +  GI +  + +     +H+ 
Sbjct: 71  ENYRLVNTKLYVTLEPCIMCLGGLIQARVSELIYACDDTR-VGIFSREKLHRNKNINHNL 129

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           ++  G+  +   ++++DFFK RR
Sbjct: 130 KVTSGVMTEECSKLLRDFFKLRR 152


>gi|262341257|ref|YP_003284112.1| cytidine/deoxycytidylate deaminase family protein [Blattabacterium
           sp. (Blattella germanica) str. Bge]
 gi|262272594|gb|ACY40502.1| cytidine/deoxycytidylate deaminase family protein [Blattabacterium
           sp. (Blattella germanica) str. Bge]
          Length = 148

 Score = 91.7 bits (226), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 50/142 (35%), Positives = 76/142 (53%), Gaps = 5/142 (3%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  AL+EA  A  +NE+P+GA     + +I++A N      ++TAHAE+L I +    L 
Sbjct: 1   MKIALKEAFIAFHKNEVPIGAAITYEDVVIAKAHNLTETFSNITAHAEMLVINLASNYLR 60

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
            + + +  LYVTLEPC MCA A+ L++I R+  GA N    G       Y+    H   +
Sbjct: 61  NKYIKKCTLYVTLEPCIMCAGALFLSQIGRVVCGAPNNSIRGFS-----YSGIKLHPKTK 115

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
              GI + + + +IQ FF  +R
Sbjct: 116 FVSGIMKNQCKALIQKFFFFKR 137


>gi|183985263|ref|YP_001853554.1| cytidine/deoxycytidylate deaminase [Mycobacterium marinum M]
 gi|183178589|gb|ACC43699.1| cytidine/deoxycytidylate deaminase [Mycobacterium marinum M]
          Length = 152

 Score = 91.7 bits (226), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 50/129 (38%), Positives = 73/129 (56%), Gaps = 2/129 (1%)

Query: 23  EIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEI-LPEVDLYVTL 80
           ++P+GAV +  +   ++RA N   EL D TAHAEILA+R   R+L     L    L VT+
Sbjct: 22  DVPIGAVVISADGTELARAVNAREELGDPTAHAEILALRAAARVLGDGWRLEGATLAVTV 81

Query: 81  EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140
           EPCTMCA A+ LAR+ RL +GA  PK G + +          +H P++  G+  Q     
Sbjct: 82  EPCTMCAGALVLARVARLVFGAWEPKTGAVGSLWDVVRDRRLNHRPQVRGGVLAQECAAP 141

Query: 141 IQDFFKERR 149
           +++FF  +R
Sbjct: 142 LEEFFGRQR 150


>gi|81300665|ref|YP_400873.1| tRNA-adenosine deaminase [Synechococcus elongatus PCC 7942]
 gi|81169546|gb|ABB57886.1| tRNA-adenosine deaminase [Synechococcus elongatus PCC 7942]
          Length = 168

 Score = 91.7 bits (226), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 54/143 (37%), Positives = 77/143 (53%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M+ A E+A  A    EIP+GAV V    +++   NR    +D   HAEI+AIR     +
Sbjct: 20  WMTIAYEQAVIAGTAGEIPIGAVIVHQGHLLATGQNRRERDRDPCGHAEIIAIRAAAARI 79

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  LYVTLEPC MCA AI  AR+ +L Y A +PK G I +          HH  
Sbjct: 80  GDWRLSDCQLYVTLEPCPMCAGAIIQARLGQLIYAADDPKAGAIRSLLNLPDSPVSHHHL 139

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
            +  GI  +   Q+++D+F++RR
Sbjct: 140 SVLAGILAEPCGQLLRDWFQQRR 162


>gi|26987771|ref|NP_743196.1| cumB protein [Pseudomonas putida KT2440]
 gi|24982465|gb|AAN66660.1|AE016294_2 cumB protein [Pseudomonas putida KT2440]
          Length = 145

 Score = 91.7 bits (226), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 53/126 (42%), Positives = 74/126 (58%)

Query: 24  IPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83
           +PVGAV V + ++I +  NR     D +AHAE++AIR   R  S   LP   LYVTLEPC
Sbjct: 17  VPVGAVLVQHGQVIGQGFNRPIIDSDPSAHAEMVAIRAAARSASNYRLPGSTLYVTLEPC 76

Query: 84  TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQD 143
           +MCA  I  +R+ R+ +GA  PK G +++  QF+     +H   +  G+  Q   QI+ D
Sbjct: 77  SMCAGLIVHSRVMRVVFGALEPKAGIVQSQGQFFGQGFLNHRVMVEGGVLAQECGQILSD 136

Query: 144 FFKERR 149
           FFK RR
Sbjct: 137 FFKARR 142


>gi|302879427|ref|YP_003847991.1| CMP/dCMP deaminase zinc-binding [Gallionella capsiferriformans
           ES-2]
 gi|302582216|gb|ADL56227.1| CMP/dCMP deaminase zinc-binding [Gallionella capsiferriformans
           ES-2]
          Length = 240

 Score = 91.7 bits (226), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 52/128 (40%), Positives = 69/128 (53%)

Query: 22  NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81
            E+PVGAV V + +II R  N    L D +AHAE+ A+R   + L    L   +L+VTLE
Sbjct: 96  GEVPVGAVVVKDGQIIGRGYNAPISLHDPSAHAEMQALRAAAQYLGNYRLVGCELFVTLE 155

Query: 82  PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141
           PC MCA AI  ARIRRL YGAS+ K G   +    +     +H  E+  G+  +     +
Sbjct: 156 PCVMCAGAIMHARIRRLVYGASDFKTGVCGSLLDLFAEQRLNHHTEVAGGVLAEACGATL 215

Query: 142 QDFFKERR 149
             FF  RR
Sbjct: 216 SRFFSLRR 223


>gi|89901064|ref|YP_523535.1| CMP/dCMP deaminase [Rhodoferax ferrireducens T118]
 gi|89345801|gb|ABD70004.1| CMP/dCMP deaminase, zinc-binding [Rhodoferax ferrireducens T118]
          Length = 363

 Score = 91.7 bits (226), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 52/142 (36%), Positives = 81/142 (57%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  AL +A  AAL  E+PVGAV + +  +I+   N + E +D +AHAEI+A+R     L 
Sbjct: 21  MQLALTQAGLAALAGEVPVGAVVLKDGVLIASGRNASIETQDPSAHAEIVALRAAALALG 80

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
              L   +L+VTLEPC MC  A+  AR++R+ YGA +PK G   +    +     +H  E
Sbjct: 81  NYRLDGCELFVTLEPCAMCVGAMLHARLQRVVYGAPDPKTGAAGSVLDLFANPQLNHHTE 140

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
           +  G+      +++Q FF+++R
Sbjct: 141 VQGGVLADACAELLQRFFQQKR 162


>gi|284928847|ref|YP_003421369.1| tRNA-adenosine deaminase [cyanobacterium UCYN-A]
 gi|284809306|gb|ADB95011.1| tRNA-adenosine deaminase [cyanobacterium UCYN-A]
          Length = 162

 Score = 91.7 bits (226), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 56/144 (38%), Positives = 76/144 (52%), Gaps = 1/144 (0%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           +M  AL  AQ A    ++PVGAV V N   +I++  N  +   D T HAEI+AIR   + 
Sbjct: 11  WMKKALSLAQKAENLEDVPVGAVIVDNYGNLIAQGHNCKKRNNDPTGHAEIVAIRQASQK 70

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           L    L +  LYVTLEPC MC  AI  +RI  L YG  +PK G I            +H 
Sbjct: 71  LQSCYLEKCVLYVTLEPCIMCTGAIIHSRIGLLVYGIDDPKTGAIRTVLNLPDSNASNHR 130

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
             +  GI +Q  +Q +Q++FK+ R
Sbjct: 131 LPVISGILKQDCQQHLQEWFKKIR 154


>gi|56752247|ref|YP_172948.1| putative cytidine and deoxycytidylate deaminase [Synechococcus
           elongatus PCC 6301]
 gi|56687206|dbj|BAD80428.1| putative cytidine and deoxycytidylate deaminase [Synechococcus
           elongatus PCC 6301]
          Length = 168

 Score = 91.7 bits (226), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 54/143 (37%), Positives = 77/143 (53%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M+ A E+A  A    EIP+GAV V    +++   NR    +D   HAEI+AIR     +
Sbjct: 20  WMTIAYEQAVIAGTAGEIPIGAVIVHQGHLLATGQNRRERDRDPCGHAEIIAIRAAAARI 79

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  LYVTLEPC MCA AI  AR+ +L Y A +PK G I +          HH  
Sbjct: 80  GDWRLSDCHLYVTLEPCPMCAGAIIQARLGQLIYAADDPKAGAIRSLLNLPDSPVSHHHL 139

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
            +  GI  +   Q+++D+F++RR
Sbjct: 140 SVLAGILAEPCGQLLRDWFQQRR 162


>gi|114562317|ref|YP_749830.1| CMP/dCMP deaminase, zinc-binding [Shewanella frigidimarina NCIMB
           400]
 gi|114333610|gb|ABI70992.1| tRNA-adenosine deaminase [Shewanella frigidimarina NCIMB 400]
          Length = 189

 Score = 91.7 bits (226), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 51/143 (35%), Positives = 77/143 (53%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  A++ A+ A L+ E+PVGAV V ++ +I+   N +    D TAHAE+  IR   ++L
Sbjct: 35  WMRLAMQLAEQAELKGEVPVGAVLVKDDVLIASGCNLSIVNHDPTAHAEMECIRQAGKVL 94

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               + +  LYVTLEPCTMCA A+  +RI R+ YGA + K G   +          +H  
Sbjct: 95  ENYRMLDTTLYVTLEPCTMCAGAMVHSRITRVVYGADDLKTGAAGSVINLLQHPVFNHQL 154

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+  G+        +  FF+ RR
Sbjct: 155 EVSSGVLAAECGAQLSAFFQRRR 177


>gi|304390572|ref|ZP_07372525.1| cytidine/deoxycytidylate deaminase [Mobiluncus curtisii subsp.
           curtisii ATCC 35241]
 gi|304326328|gb|EFL93573.1| cytidine/deoxycytidylate deaminase [Mobiluncus curtisii subsp.
           curtisii ATCC 35241]
          Length = 180

 Score = 91.7 bits (226), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 56/144 (38%), Positives = 76/144 (52%), Gaps = 2/144 (1%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELK--DVTAHAEILAIRMGCRI 65
           +  A   AQ A    +IPVGAV +    I++  G   RE    D +AHAEI+A+R     
Sbjct: 37  LDTAYRLAQKAGRAGDIPVGAVVLTPEGIVAGLGLNQRENPPYDPSAHAEIVALREAAGR 96

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           L +  L    L  TLEPCTMCA AI  ARI RL +GA +PK G   +       +  +H 
Sbjct: 97  LERWNLKGCTLVATLEPCTMCAGAIVNARISRLIFGAWDPKAGACGSIRDVVRDSRLNHQ 156

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
            E+  G+ E R + +++ FF ERR
Sbjct: 157 VEVKGGVDEPRIKALLKAFFGERR 180


>gi|256545480|ref|ZP_05472842.1| tRNA-specific adenosine deaminase [Anaerococcus vaginalis ATCC
           51170]
 gi|256398876|gb|EEU12491.1| tRNA-specific adenosine deaminase [Anaerococcus vaginalis ATCC
           51170]
          Length = 157

 Score = 91.7 bits (226), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 50/139 (35%), Positives = 80/139 (57%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  A+ EA+ A L +E+P+G V V + KII+R+ N   + K    HAEILAI    + +
Sbjct: 6   YMKEAINEAKLARLEDEVPIGCVIVKDEKIIARSHNYTYKGKSALKHAEILAIDKASKYV 65

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  +YVT+EPC+MCA AI  +RI+RL  G ++ K G   + T      +  H  
Sbjct: 66  GDFRLEDCTMYVTMEPCSMCAGAIINSRIKRLVIGLADVKRGACGSNTNITGDRSQLHYL 125

Query: 127 EIYPGISEQRSRQIIQDFF 145
           +   G+ ++ S +++Q+FF
Sbjct: 126 DAEFGLMKEESLELLQNFF 144


>gi|167586888|ref|ZP_02379276.1| CMP/dCMP deaminase, zinc-binding protein [Burkholderia ubonensis
           Bu]
          Length = 191

 Score = 91.7 bits (226), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 53/139 (38%), Positives = 74/139 (53%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  A   A  A    E+PVGAV V  +++I+R  N      D +AHAE+ A+RM  + L
Sbjct: 32  FMRLAQAAADEARAAGEVPVGAVLVRGDEVIARGFNHPIGGHDPSAHAEMAALRMAAQHL 91

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               +P  +LYVTLEPC MCA AI  ARI R+ YGA++PK G   +    +     +H  
Sbjct: 92  QNYRMPGCELYVTLEPCLMCAGAIMHARIARVVYGAADPKTGACGSVIDAFANPQLNHHT 151

Query: 127 EIYPGISEQRSRQIIQDFF 145
           E+  G+        ++ FF
Sbjct: 152 EVVGGVLADECGAALKSFF 170


>gi|315654318|ref|ZP_07907226.1| cytidine/deoxycytidylate deaminase [Mobiluncus curtisii ATCC 51333]
 gi|315491353|gb|EFU80970.1| cytidine/deoxycytidylate deaminase [Mobiluncus curtisii ATCC 51333]
          Length = 180

 Score = 91.7 bits (226), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 55/137 (40%), Positives = 74/137 (54%), Gaps = 2/137 (1%)

Query: 15  AQNAALRNEIPVGAVAVLNNKIISRAGNRNRELK--DVTAHAEILAIRMGCRILSQEILP 72
           AQ A    +IPVGAV +    I++  G   RE    D +AHAEI+A+R     L +  L 
Sbjct: 44  AQKAGRAGDIPVGAVVLTPEGIVAGLGLNQRENPPYDPSAHAEIVALREAAGRLERWNLK 103

Query: 73  EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGI 132
              L  TLEPCTMCA AI  ARI RL +GA +PK G   +       +  +H  E+  G+
Sbjct: 104 GCTLVATLEPCTMCAGAIVNARISRLIFGAWDPKAGACGSIRDVVRDSRLNHQVEVKGGV 163

Query: 133 SEQRSRQIIQDFFKERR 149
            E R + +++ FF ERR
Sbjct: 164 DEPRVKALLKAFFGERR 180


>gi|118619510|ref|YP_907842.1| cytidine/deoxycytidylate deaminase [Mycobacterium ulcerans Agy99]
 gi|118571620|gb|ABL06371.1| cytidine/deoxycytidylate deaminase [Mycobacterium ulcerans Agy99]
          Length = 152

 Score = 91.7 bits (226), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 50/129 (38%), Positives = 73/129 (56%), Gaps = 2/129 (1%)

Query: 23  EIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEI-LPEVDLYVTL 80
           ++P+GAV +  +   ++RA N   EL D TAHAEILA+R   R+L     L    L VT+
Sbjct: 22  DVPIGAVMISADGTELARAVNAREELGDPTAHAEILALRAAARVLGDGWRLEGATLAVTV 81

Query: 81  EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140
           EPCTMCA A+ LAR+ RL +GA  PK G + +          +H P++  G+  Q     
Sbjct: 82  EPCTMCAGALVLARVARLVFGAWEPKTGAVGSLWDVVRDRRLNHRPQVRGGVLAQECAAP 141

Query: 141 IQDFFKERR 149
           +++FF  +R
Sbjct: 142 LEEFFGRQR 150


>gi|54294609|ref|YP_127024.1| hypothetical protein lpl1685 [Legionella pneumophila str. Lens]
 gi|53754441|emb|CAH15925.1| hypothetical protein lpl1685 [Legionella pneumophila str. Lens]
          Length = 149

 Score = 91.7 bits (226), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 56/144 (38%), Positives = 78/144 (54%), Gaps = 3/144 (2%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           +M  A E+A  A    E+PVGAV V  +N+++    N   +  D + HAEI AIR   R 
Sbjct: 8   WMQLAYEQAVIARNEGEVPVGAVLVSKDNQLLGVGRNVIEKSHDPSDHAEIRAIRQASRK 67

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           L+   L +  LYVTLEPC MCA  +  ARI+RL +   + K G    G+ F  L   +HS
Sbjct: 68  LNNHRLLDTTLYVTLEPCVMCAGLMVHARIKRLVFATRDFKAGA--AGSIFNVLHALNHS 125

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
             I  GI +    Q++ DFF++ R
Sbjct: 126 VLIDEGIMQAECSQLLSDFFRKLR 149


>gi|212695506|ref|ZP_03303634.1| hypothetical protein ANHYDRO_00023 [Anaerococcus hydrogenalis DSM
           7454]
 gi|212677506|gb|EEB37113.1| hypothetical protein ANHYDRO_00023 [Anaerococcus hydrogenalis DSM
           7454]
          Length = 180

 Score = 91.3 bits (225), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 53/143 (37%), Positives = 79/143 (55%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  A+ EA+ A L  E+P+G V V N KII+R+ N   + K    HAEILAI    + +
Sbjct: 26  YMREAINEAKLARLEEEVPIGCVIVKNGKIIARSHNYTYKGKSALKHAEILAIDKASKYV 85

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  +YVT+EPC+MCA AI  +RI RL    ++ K G   + T      +  H  
Sbjct: 86  GDFRLEDCTMYVTMEPCSMCAGAIINSRIDRLVIALADVKRGACGSNTNITGDRSQLHFL 145

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           +   G+ + +S +I+Q FFK+ R
Sbjct: 146 DAEFGLMKDQSLEILQSFFKKLR 168


>gi|255279741|ref|ZP_05344296.1| tRNA-specific adenosine deaminase [Bryantella formatexigens DSM
           14469]
 gi|255269514|gb|EET62719.1| tRNA-specific adenosine deaminase [Bryantella formatexigens DSM
           14469]
          Length = 166

 Score = 91.3 bits (225), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 47/143 (32%), Positives = 77/143 (53%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  A+ +A+ A   +E+P+G V V + KII+R  NR    K+  +HAE++AI+   +  
Sbjct: 12  FMREAIRQAKKAYALDEVPIGCVIVQDGKIIARGYNRRNTDKNTLSHAELIAIKKAAKKT 71

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L    +Y+TLEPC MCA A+  AR+     G+ NPK G   +      +   +H  
Sbjct: 72  GDWRLEGCTMYITLEPCQMCAGAMVQARLTEAVIGSMNPKAGCAGSILNILEMPEFNHQV 131

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           ++  G+ E+   +++  FF+E R
Sbjct: 132 QVTRGVLEEECSELLSRFFRELR 154


>gi|294140156|ref|YP_003556134.1| cytidine/deoxycytidylate deaminase family protein [Shewanella
           violacea DSS12]
 gi|293326625|dbj|BAJ01356.1| cytidine/deoxycytidylate deaminase family protein [Shewanella
           violacea DSS12]
          Length = 169

 Score = 91.3 bits (225), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 51/143 (35%), Positives = 73/143 (51%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FMS A+E A  A    E+PVGAV V + ++IS   N    L D +AHAE+  +R   ++ 
Sbjct: 7   FMSMAMEMAHKAEAVGEVPVGAVLVKHGQVISAGFNYCIGLHDPSAHAEMQCLRQAGKVT 66

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  LYVTLEPC MCA A+  +RI RL +GA + K G              +H  
Sbjct: 67  ENYRLLDTTLYVTLEPCAMCAGAMVHSRIARLVFGAKDEKTGAAGTVIDLVRHPDFNHQL 126

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           ++  G+      + +  FF+ RR
Sbjct: 127 QVSDGVLADECSEQLSQFFRRRR 149


>gi|111021134|ref|YP_704106.1| tRNA-specific adenosine deaminase [Rhodococcus jostii RHA1]
 gi|110820664|gb|ABG95948.1| probable tRNA-specific adenosine deaminase [Rhodococcus jostii
           RHA1]
          Length = 123

 Score = 91.3 bits (225), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 48/114 (42%), Positives = 64/114 (56%), Gaps = 1/114 (0%)

Query: 37  ISRAGNRNRELKDVTAHAEILAIRMGCRILSQEI-LPEVDLYVTLEPCTMCAAAISLARI 95
           +SRA N    + D TAHAEI+A+R   R+      L    L VTLEPCTMCA A+ LARI
Sbjct: 10  VSRAVNSREAMSDPTAHAEIIALRAAARVYGDGWRLEGATLAVTLEPCTMCAGALVLARI 69

Query: 96  RRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
            R+ +GA  PK G + +           H P++  G+ E     I++DFF+ERR
Sbjct: 70  SRVVFGAWEPKTGAVGSLWDVVRDRRLTHRPQVRGGVLEDECAGILEDFFRERR 123


>gi|325479006|gb|EGC82107.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Anaerococcus prevotii ACS-065-V-Col13]
          Length = 169

 Score = 91.3 bits (225), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 55/143 (38%), Positives = 74/143 (51%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  A+ EA+ A    E+PVGAV V   +II R  N   + K    HAEI+AI+     +
Sbjct: 19  FMQEAISEARLARFVEEVPVGAVIVYKGEIIGRGHNYTYKGKSALKHAEIMAIKEASEYM 78

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L E  +YVT+EPC+MCA AI  +RI RL  G  +PK G   + T      +  H  
Sbjct: 79  DDFRLEECTMYVTMEPCSMCAGAIINSRIDRLVIGIRDPKRGACGSNTNVTGDRSQLHYL 138

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           +   G+SE+     IQ FF+  R
Sbjct: 139 DAEFGLSEEECLYEIQTFFRYLR 161


>gi|92112967|ref|YP_572895.1| tRNA-adenosine deaminase [Chromohalobacter salexigens DSM 3043]
 gi|91796057|gb|ABE58196.1| tRNA-adenosine deaminase [Chromohalobacter salexigens DSM 3043]
          Length = 151

 Score = 91.3 bits (225), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 51/150 (34%), Positives = 76/150 (50%), Gaps = 1/150 (0%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAI 59
           M+    +M  AL++A  A    E+PVGAV V  +  I+    N      D +AHAE+ A+
Sbjct: 1   MRSDTFYMHRALDQAHRALEAGEVPVGAVVVARDGDIVGTGFNAPVSSHDPSAHAEVRAL 60

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
           R     L    L    L+VTLEPC MC  AI  AR+ R+ Y A+ P+ G +E+    +  
Sbjct: 61  RDAAERLGNYRLEGCTLFVTLEPCLMCTGAIIHARVARVVYAAAEPRSGMVESRANLFAQ 120

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
              +H  E+  G+   R+  +++ FF  RR
Sbjct: 121 PWFNHRVEVEGGVLASRATHLLKAFFAARR 150


>gi|226355797|ref|YP_002785537.1| tRNA(Ile)-lysidine synthetase [Deinococcus deserti VCD115]
 gi|259533711|sp|C1D1Q9|TILS_DEIDV RecName: Full=tRNA(Ile)-lysidine synthase; AltName:
           Full=tRNA(Ile)-2-lysyl-cytidine synthase; AltName:
           Full=tRNA(Ile)-lysidine synthetase
 gi|226317787|gb|ACO45783.1| putative tRNA(Ile)-lysidine synthetase [Deinococcus deserti VCD115]
          Length = 533

 Score = 91.3 bits (225), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 56/143 (39%), Positives = 76/143 (53%), Gaps = 2/143 (1%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  AL  A+ AAL  E+PVGAV +    +II    N +R   D+T HAE+ A+R     L
Sbjct: 383 MGEALGLAREAALAQEVPVGAVVLGPGGRIIGSGRNTSRADSDMTRHAELAALRAATAEL 442

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L    L VTLEPC MC  A   AR+ R+ YGASNPK G +  G      +   H P
Sbjct: 443 GTAYLTGCTLVVTLEPCPMCLGAALEARVERIVYGASNPKAGAL-GGVSDLLSSHWGHVP 501

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
            +  G+  Q + ++++D F+E R
Sbjct: 502 AVTGGVRAQDAARVLRDSFQELR 524


>gi|257438151|ref|ZP_05613906.1| tRNA-specific adenosine deaminase [Faecalibacterium prausnitzii
           A2-165]
 gi|257199482|gb|EEU97766.1| tRNA-specific adenosine deaminase [Faecalibacterium prausnitzii
           A2-165]
          Length = 162

 Score = 91.3 bits (225), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 48/122 (39%), Positives = 71/122 (58%), Gaps = 1/122 (0%)

Query: 24  IPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83
           +PVGAV   N +II+ A N     K+   HAE+LAI   C+ L    L + +L+VTLEPC
Sbjct: 23  VPVGAVVARNGEIIAAAHNTRETEKNALHHAELLAIDAACKKLGGWRLWQCELFVTLEPC 82

Query: 84  TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQD 143
            MC+  I  +RIRR+ YGA++ K G   + T  + L   HH P +  G+  + ++ ++Q 
Sbjct: 83  PMCSGGIINSRIRRVVYGAADTKAGCCGSVTDLFALPFNHH-PVVERGLRAEEAQALLQA 141

Query: 144 FF 145
           FF
Sbjct: 142 FF 143


>gi|298345726|ref|YP_003718413.1| nucleoside deaminase [Mobiluncus curtisii ATCC 43063]
 gi|298235787|gb|ADI66919.1| nucleoside deaminase [Mobiluncus curtisii ATCC 43063]
          Length = 180

 Score = 91.3 bits (225), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 56/144 (38%), Positives = 76/144 (52%), Gaps = 2/144 (1%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELK--DVTAHAEILAIRMGCRI 65
           +  A   AQ A    +IPVGAV +    I++  G   RE    D +AHAEI+A+R     
Sbjct: 37  LDTAYGLAQKAGRAGDIPVGAVVLTPEGIVAGLGLNQRENPPYDPSAHAEIVALREAAGR 96

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           L +  L    L  TLEPCTMCA AI  ARI RL +GA +PK G   +       +  +H 
Sbjct: 97  LERWNLKGCTLVATLEPCTMCAGAIVNARISRLIFGAWDPKAGACGSIRDVVRDSRLNHQ 156

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
            E+  G+ E R + +++ FF ERR
Sbjct: 157 VEVKGGVDEPRIKALLKAFFGERR 180


>gi|153877830|ref|ZP_02004382.1| cytosine/adenosine deaminase [Beggiatoa sp. PS]
 gi|152065706|gb|EDN65618.1| cytosine/adenosine deaminase [Beggiatoa sp. PS]
          Length = 156

 Score = 91.3 bits (225), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 53/144 (36%), Positives = 79/144 (54%), Gaps = 4/144 (2%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  AL  A+ AA + EIPVGAV +     I+   N++    D TAHAEI+A+R     L
Sbjct: 12  WMRHALHLAERAAKQGEIPVGAVIIHGESCIAEGWNQSILAHDPTAHAEIVALRKAAHYL 71

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  LYVTLEPC MCA AI  AR++R+ +GA + K G    G++F  L    H+ 
Sbjct: 72  KNYRLIDTTLYVTLEPCVMCAGAILQARVKRVVFGAYDEKAGAA--GSRFDILRDTRHNH 129

Query: 127 EI--YPGISEQRSRQIIQDFFKER 148
           ++     +  +     + DFF+++
Sbjct: 130 QVECVSQVLAEECGACLTDFFRQK 153


>gi|148546319|ref|YP_001266421.1| CMP/dCMP deaminase, zinc-binding [Pseudomonas putida F1]
 gi|148510377|gb|ABQ77237.1| tRNA-adenosine deaminase [Pseudomonas putida F1]
 gi|313497401|gb|ADR58767.1| CMP/dCMP deaminase zinc-binding protein [Pseudomonas putida BIRD-1]
          Length = 159

 Score = 91.3 bits (225), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 53/126 (42%), Positives = 74/126 (58%)

Query: 24  IPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83
           +PVGAV V + ++I +  NR     D +AHAE++AIR   R  S   LP   LYVTLEPC
Sbjct: 31  VPVGAVLVQHGQVIGQGFNRPIIDSDPSAHAEMVAIRAAARSASNYRLPGSTLYVTLEPC 90

Query: 84  TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQD 143
           +MCA  I  +R+ R+ +GA  PK G +++  QF+     +H   +  G+  Q   QI+ D
Sbjct: 91  SMCAGLIVHSRVMRVVFGALEPKAGIVQSQGQFFGQGFLNHRVMVEGGVLAQECGQILSD 150

Query: 144 FFKERR 149
           FFK RR
Sbjct: 151 FFKARR 156


>gi|33519984|ref|NP_878816.1| putative cytosine/adenosine deaminase [Candidatus Blochmannia
           floridanus]
 gi|33504330|emb|CAD83223.1| cytosine/adenosine deaminase zinc-binding region; hydrolase
           activity [Candidatus Blochmannia floridanus]
          Length = 159

 Score = 91.3 bits (225), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 55/150 (36%), Positives = 80/150 (53%), Gaps = 13/150 (8%)

Query: 6   VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           ++M  A+  A  A L  ++ VGAV V N ++I    N + +  D +AHAEI+A+R+G  +
Sbjct: 9   IWMCYAVMLANIADLNGDVSVGAVLVYNERLIGCGYNASIKNNDPSAHAEIVALRIGAEV 68

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT---- 121
           L    L    LYVTLEPC MC  A+  AR+ +L YGA N K       T+++++      
Sbjct: 69  LGNYRLLNTTLYVTLEPCMMCIGAMIHARVYKLVYGAHNKK-------TEYFSIWNKYIR 121

Query: 122 --CHHSPEIYPGISEQRSRQIIQDFFKERR 149
             C+H   I  G+ E+     I  FFK RR
Sbjct: 122 NDCNHRFVIKSGVLEKICSDQISSFFKIRR 151


>gi|256831602|ref|YP_003160329.1| CMP/dCMP deaminase zinc-binding [Jonesia denitrificans DSM 20603]
 gi|256685133|gb|ACV08026.1| CMP/dCMP deaminase zinc-binding [Jonesia denitrificans DSM 20603]
          Length = 154

 Score = 91.3 bits (225), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 60/147 (40%), Positives = 77/147 (52%), Gaps = 6/147 (4%)

Query: 8   MSCALEEAQNAALR----NEIPVGAVAVLNNKIISRAGNRNREL-KDVTAHAEILAIRMG 62
           M  AL EA+ A LR     ++P+GAV +  +     A +  REL +D TAHAEILAIR  
Sbjct: 1   MDDALTEARRA-LRLHGPPDVPIGAVIIDAHGHTIAAAHNERELTQDPTAHAEILAIRKA 59

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
              L    L +  L VTLEPC MCA AI LARI R+  GA +PK G   +          
Sbjct: 60  ATHLGTWRLDQCTLVVTLEPCAMCAGAIVLARIPRIVIGAWDPKAGATGSVFDIVRAPQL 119

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H  E+ PGI    S  ++ +FF   R
Sbjct: 120 NHFVEVIPGIRAADSATLLTEFFATHR 146


>gi|163856878|ref|YP_001631176.1| putative zinc-binding hydrolase [Bordetella petrii DSM 12804]
 gi|163260606|emb|CAP42908.1| putative zinc-binding hydrolase [Bordetella petrii]
          Length = 164

 Score = 90.9 bits (224), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 50/129 (38%), Positives = 70/129 (54%), Gaps = 1/129 (0%)

Query: 22  NEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80
            E+PVGAV V    +++    NR     D TAHAEI+A+R   R L    LP V LYVTL
Sbjct: 30  GEVPVGAVVVDAQGQVLGAGYNRTITDSDPTAHAEIVALRAAARRLGNYRLPGVSLYVTL 89

Query: 81  EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140
           EPC MC  A+  AR+ R+ YGA++PK G   +      +   +H   I  G+  +    +
Sbjct: 90  EPCVMCIGAMLHARLARVVYGAADPKTGACGSVLDVGAVVRLNHQTTITGGVLAEPCGNL 149

Query: 141 IQDFFKERR 149
           ++ FF+ RR
Sbjct: 150 LRQFFRARR 158


>gi|119961460|ref|YP_946593.1| cytidine/deoxycytidylate deaminase [Arthrobacter aurescens TC1]
 gi|119948319|gb|ABM07230.1| putative cytidine/deoxycytidylate deaminase [Arthrobacter aurescens
           TC1]
          Length = 177

 Score = 90.9 bits (224), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 59/157 (37%), Positives = 83/157 (52%), Gaps = 16/157 (10%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELK-DVTAHAEILAIRMGCRI 65
           +M  AL+EA+ A   +++P+GAV +  +  +  +G   RE   D TAHAEI+AIR     
Sbjct: 14  WMGLALDEARLALKTDDVPIGAVVLGPDGGVLGSGRNEREAHGDPTAHAEIVAIREAAAA 73

Query: 66  LSQEI-----------LPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           L Q             L +  L VTLEPC MCA AI LARI R+ +GA + K G +  G+
Sbjct: 74  LRQLAHDSGASGDGWRLEDCTLVVTLEPCAMCAGAIVLARIPRVVFGAWDEKAGAV--GS 131

Query: 115 QFYTLAT--CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            F  L     +H  E+Y G+ E     +++DFF   R
Sbjct: 132 VFDILRERRLNHWVEVYAGVREDECAALLRDFFATHR 168


>gi|312891108|ref|ZP_07750631.1| CMP/dCMP deaminase zinc-binding [Mucilaginibacter paludis DSM
           18603]
 gi|311296416|gb|EFQ73562.1| CMP/dCMP deaminase zinc-binding [Mucilaginibacter paludis DSM
           18603]
          Length = 159

 Score = 90.9 bits (224), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 51/146 (34%), Positives = 79/146 (54%), Gaps = 7/146 (4%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           + FM  AL+EA+ A   +EIP+GA+ V   +II R  N    L DV+AHAE+ A+     
Sbjct: 17  DFFMKEALKEARLALAEDEIPIGALVVCKGQIIGRGHNLTERLNDVSAHAEMQALTAATN 76

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPK-GGGIENGTQFYTLATCH 123
               + LP+  LYVT+EPC MCA A    ++ ++ +GA + + G G  N          H
Sbjct: 77  YTGGKYLPDCTLYVTMEPCVMCAGASYWFQVGKIVFGAYDTRLGFGRLNQ------KITH 130

Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149
               I  GI E    +++++FF+++R
Sbjct: 131 PKTLITGGIMENECSELVREFFRKKR 156


>gi|120611742|ref|YP_971420.1| CMP/dCMP deaminase [Acidovorax citrulli AAC00-1]
 gi|120590206|gb|ABM33646.1| CMP/dCMP deaminase, zinc-binding protein [Acidovorax citrulli
           AAC00-1]
          Length = 484

 Score = 90.9 bits (224), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 54/140 (38%), Positives = 75/140 (53%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  AL+EA  AA R EIPVGAV V + ++++R  N      D TAHAEI+A+R     L
Sbjct: 22  WMRIALQEAAEAAARGEIPVGAVVVRDGELVARGSNAPIAGHDPTAHAEIVALRAAAGRL 81

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L    LYVTLEPC MC+ A+  AR+ R+ YGA + K G   +    +     +H  
Sbjct: 82  GNYRLDGCTLYVTLEPCAMCSGAMLHARLDRVVYGAPDAKTGAAGSVVDLFAQPALNHHT 141

Query: 127 EIYPGISEQRSRQIIQDFFK 146
            I  G+  Q    ++  FF+
Sbjct: 142 RIEGGVLAQECGALLSGFFQ 161


>gi|269129124|ref|YP_003302494.1| CMP/dCMP deaminase zinc-binding protein [Thermomonospora curvata
           DSM 43183]
 gi|268314082|gb|ACZ00457.1| CMP/dCMP deaminase zinc-binding protein [Thermomonospora curvata
           DSM 43183]
          Length = 168

 Score = 90.9 bits (224), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 52/144 (36%), Positives = 78/144 (54%), Gaps = 3/144 (2%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNN--KIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M  AL++A+ A    ++PVGAV +L++  ++I+   N   +  D TAHAE++A+R     
Sbjct: 24  MRLALDQARLAMESGDVPVGAV-ILDSGGRVIATGRNEREQTADPTAHAEVVALRSAAAR 82

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           L    L    L VTLEPCTMCA A  LAR+ R+ YGA +PK G + +          +H 
Sbjct: 83  LGSWRLEGCTLVVTLEPCTMCAGAAVLARVDRIVYGAVDPKAGAVGSLWDVVRDRRLNHR 142

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
           PE+   +       ++ +FF  RR
Sbjct: 143 PEVIAEVLADECGAVLTEFFARRR 166


>gi|161524475|ref|YP_001579487.1| CMP/dCMP deaminase zinc-binding [Burkholderia multivorans ATCC
           17616]
 gi|221215505|ref|ZP_03588469.1| tRNA-specific adenosine deaminase [Burkholderia multivorans CGD1]
 gi|160341904|gb|ABX14990.1| CMP/dCMP deaminase zinc-binding [Burkholderia multivorans ATCC
           17616]
 gi|221164689|gb|EED97171.1| tRNA-specific adenosine deaminase [Burkholderia multivorans CGD1]
          Length = 187

 Score = 90.9 bits (224), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 53/141 (37%), Positives = 77/141 (54%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  AL  A+ A    E+PVGAV V  +++++R  N      D +AHAE+ A+RM  + L
Sbjct: 28  FMRLALAAAEEARAAGEVPVGAVLVRGDEVLARGFNHPIGGHDPSAHAEMAALRMAAQHL 87

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               +P  +LYVTLEPC MCA AI  ARI R+ +GA++PK G   +    +     +H  
Sbjct: 88  QNYRMPGCELYVTLEPCLMCAGAIMHARIARVVFGAADPKTGVCGSVMDAFANPQLNHHT 147

Query: 127 EIYPGISEQRSRQIIQDFFKE 147
           E+  G+        ++ FF E
Sbjct: 148 EVVGGVLAHECGAALKSFFAE 168


>gi|325981113|ref|YP_004293515.1| CMP/dCMP deaminase zinc-binding protein [Nitrosomonas sp. AL212]
 gi|325530632|gb|ADZ25353.1| CMP/dCMP deaminase zinc-binding protein [Nitrosomonas sp. AL212]
          Length = 152

 Score = 90.9 bits (224), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 55/142 (38%), Positives = 75/142 (52%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  ALE A  A    E+PVGAV V +  I+ R  NR     D +AHAEI+A+R     ++
Sbjct: 1   MQAALELALQAQECGEVPVGAVVVQHGVIVGRGYNRPISTADPSAHAEIMAMRDAGGHMA 60

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
              L +  LYVTLEPC MC  AI  ARI+RL Y A++PK G   +          +H   
Sbjct: 61  NYRLLDCVLYVTLEPCVMCIGAIFHARIQRLVYAAADPKTGACGSVLDLPAETRLNHHLL 120

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
           +  GI    +  +++ FF +RR
Sbjct: 121 VDAGIMAPEAGTLLRQFFAQRR 142


>gi|91792629|ref|YP_562280.1| CMP/dCMP deaminase, zinc-binding [Shewanella denitrificans OS217]
 gi|91714631|gb|ABE54557.1| CMP/dCMP deaminase, zinc-binding [Shewanella denitrificans OS217]
          Length = 177

 Score = 90.9 bits (224), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 52/147 (35%), Positives = 77/147 (52%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
           K   +M  A+  A+ A  + E+PVGAV V +N++++   N +    D +AHAE+  IR  
Sbjct: 20  KDEHWMRVAMSMAEEAEAKGEVPVGAVLVKDNQLLATGFNLSISEHDCSAHAEMACIRAA 79

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
             ++    L +  LYVTLEPC MCA A+  ARI RL +GA++ K G   +          
Sbjct: 80  GTLIENYRLLDTTLYVTLEPCPMCAGAMVHARIARLVFGATDLKTGAAGSVMNLLQHPGL 139

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H  EI  G+  +     +  FFK RR
Sbjct: 140 NHQLEITSGVLAEPCAAQLSAFFKRRR 166


>gi|4580029|gb|AAD24212.1|AF086638_2 CumB [Pseudomonas putida GB-1]
          Length = 145

 Score = 90.9 bits (224), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 51/126 (40%), Positives = 74/126 (58%)

Query: 24  IPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83
           +PVGAV V + ++I +  NR     D +AHAE++AIR   +  S   LP   LYVTLEPC
Sbjct: 17  VPVGAVLVQHGQVIGQGFNRPIIDSDPSAHAEMVAIRAAAKAASNYRLPGSTLYVTLEPC 76

Query: 84  TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQD 143
           +MCA  I  +R+ R+ +GA  PK G +++  QF+     +H   +  G+  +   QI+ D
Sbjct: 77  SMCAGLIVHSRVMRVVFGALEPKAGIVQSQGQFFGQGFLNHRVIVEGGVLAEACGQILSD 136

Query: 144 FFKERR 149
           FFK RR
Sbjct: 137 FFKARR 142


>gi|187735588|ref|YP_001877700.1| CMP/dCMP deaminase zinc-binding [Akkermansia muciniphila ATCC
           BAA-835]
 gi|187425640|gb|ACD04919.1| CMP/dCMP deaminase zinc-binding [Akkermansia muciniphila ATCC
           BAA-835]
          Length = 181

 Score = 90.9 bits (224), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 50/144 (34%), Positives = 75/144 (52%), Gaps = 1/144 (0%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  A++E++ A ++ E+PVGA+ V + ++I R  N+   LKD TAHAE++A+      L
Sbjct: 16  FMRQAMKESRKALVKGEVPVGAIVVKDGRVIGRGWNQVETLKDATAHAEMIALTAAQEAL 75

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFY-TLATCHHS 125
               L    LYVT EPC MCA AI   R  R+ +G  + K G          +    +H 
Sbjct: 76  GDWRLEGCTLYVTKEPCPMCAGAIVHCRPDRVVFGCPDAKTGAAGGWINLLDSNPPLNHK 135

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
            E+ PG+        +Q+FF+  R
Sbjct: 136 CEVRPGVLGDECLLHLQEFFRAAR 159


>gi|289208495|ref|YP_003460561.1| CMP/dCMP deaminase zinc-binding protein [Thioalkalivibrio sp.
           K90mix]
 gi|288944126|gb|ADC71825.1| CMP/dCMP deaminase zinc-binding protein [Thioalkalivibrio sp.
           K90mix]
          Length = 175

 Score = 90.5 bits (223), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 54/144 (37%), Positives = 78/144 (54%), Gaps = 1/144 (0%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           +M  AL +A+ AA   E+PVGAV V      ++ A N      D TAHAEI  +R   + 
Sbjct: 30  WMDVALAQAERAAEVGEVPVGAVLVDAEGYCLAVAHNAPIGEHDATAHAEIRVLRRAGKR 89

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
            S   L    LYVTLEPC+MCA A+  AR+ RL + AS+P+ G              +H 
Sbjct: 90  CSNYRLTGTTLYVTLEPCSMCAGAMIHARVERLVFAASDPRTGAAGGAIDLLHHPAHNHR 149

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
            E   G++ +RS +++++FF+ RR
Sbjct: 150 LECIEGVAAKRSAELLRNFFRLRR 173


>gi|327403312|ref|YP_004344150.1| CMP/dCMP deaminase zinc-binding protein [Fluviicola taffensis DSM
           16823]
 gi|327318820|gb|AEA43312.1| CMP/dCMP deaminase zinc-binding protein [Fluviicola taffensis DSM
           16823]
          Length = 148

 Score = 90.5 bits (223), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 59/143 (41%), Positives = 80/143 (55%), Gaps = 5/143 (3%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  A  EAQ A    E+PVGAV V+NN+II+RA N    L DVTAHAE+ AI      L
Sbjct: 10  FMRQAYMEAQKAFELGEVPVGAVVVVNNQIIARAHNLTERLHDVTAHAEMQAITAASEYL 69

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
             + L +  LYVTLEPC MCA A+  +++ ++ + + + K G      + Y     H   
Sbjct: 70  GAKYLKDCTLYVTLEPCVMCAGALYWSQLNKIIFASRDEKRGAGRFQNELY-----HPKT 124

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
            +  G  EQ   Q++ DFFKE+R
Sbjct: 125 VVSKGPMEQECAQLMIDFFKEKR 147


>gi|120554632|ref|YP_958983.1| CMP/dCMP deaminase, zinc-binding [Marinobacter aquaeolei VT8]
 gi|120324481|gb|ABM18796.1| tRNA-adenosine deaminase [Marinobacter aquaeolei VT8]
          Length = 167

 Score = 90.5 bits (223), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 57/144 (39%), Positives = 73/144 (50%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           K    +M+ AL  A+ AA   E+PVGA+ V + K +    N      D TAHAEI A+R 
Sbjct: 6   KNDQYWMARALMLAERAASIGEVPVGAIVVRDGKELGVGYNAPITGCDPTAHAEIRALRD 65

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
               +    L    LYVTLEPCTMC  AI  +RI RL YGA  PK G +E+  +    A 
Sbjct: 66  ASARVGNYRLTGATLYVTLEPCTMCVGAIVHSRISRLVYGAREPKAGAVESARRTLDEAH 125

Query: 122 CHHSPEIYPGISEQRSRQIIQDFF 145
            +   E    + E    Q+I DFF
Sbjct: 126 LNWQVEAEGSVLEGECGQVISDFF 149


>gi|253577340|ref|ZP_04854657.1| CMP/dCMP deaminase, zinc-binding [Paenibacillus sp. oral taxon 786
           str. D14]
 gi|251843240|gb|EES71271.1| CMP/dCMP deaminase, zinc-binding [Paenibacillus sp. oral taxon 786
           str. D14]
          Length = 165

 Score = 90.5 bits (223), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 52/143 (36%), Positives = 74/143 (51%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M+ A+ EA+ A    E+P+GAV V  ++I+ R  N      D TAHAE++AIR     L
Sbjct: 21  WMAEAIREARKAEAIGEVPIGAVIVRGDEIVGRGHNLRESSLDGTAHAEMIAIREASERL 80

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L    LYVTLEPC MCA AI   R+  + YGA +PK G              +H  
Sbjct: 81  GAWRLLHCRLYVTLEPCPMCAGAIVQCRVPHVIYGAPDPKAGCAGTLMNLLQEPRFNHRT 140

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           +I  GI ++    ++ +FF+  R
Sbjct: 141 DITSGILQEECASLLTEFFRRLR 163


>gi|167032047|ref|YP_001667278.1| CMP/dCMP deaminase zinc-binding [Pseudomonas putida GB-1]
 gi|166858535|gb|ABY96942.1| CMP/dCMP deaminase zinc-binding [Pseudomonas putida GB-1]
          Length = 159

 Score = 90.5 bits (223), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 51/126 (40%), Positives = 74/126 (58%)

Query: 24  IPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83
           +PVGAV V + ++I +  NR     D +AHAE++AIR   +  S   LP   LYVTLEPC
Sbjct: 31  VPVGAVLVQHGQVIGQGFNRPIIDSDPSAHAEMVAIRAAAKAASNYRLPGSTLYVTLEPC 90

Query: 84  TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQD 143
           +MCA  I  +R+ R+ +GA  PK G +++  QF+     +H   +  G+  +   QI+ D
Sbjct: 91  SMCAGLIVHSRVMRVVFGALEPKAGIVQSQGQFFGQGFLNHRVIVEGGVLAEACGQILSD 150

Query: 144 FFKERR 149
           FFK RR
Sbjct: 151 FFKARR 156


>gi|114320177|ref|YP_741860.1| tRNA-adenosine deaminase [Alkalilimnicola ehrlichii MLHE-1]
 gi|114226571|gb|ABI56370.1| tRNA-adenosine deaminase [Alkalilimnicola ehrlichii MLHE-1]
          Length = 164

 Score = 90.5 bits (223), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 49/126 (38%), Positives = 71/126 (56%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  AL  A  A    E+PVGAV VL+++ ++   N+    +D TAHAE++A+R    +L
Sbjct: 18  WMRRALALADQAEAAGEVPVGAVLVLDDREVAVGSNQPITARDPTAHAEVVALRRAGEVL 77

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L    LYVTLEPCTMC  AI  AR++R+ + AS+PK G   +          +H P
Sbjct: 78  GAYRLSGTTLYVTLEPCTMCIGAIIHARVKRVVFAASDPKTGACGSVFALADAPEHNHHP 137

Query: 127 EIYPGI 132
           E+  G+
Sbjct: 138 EVVGGL 143


>gi|239623044|ref|ZP_04666075.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
 gi|239522411|gb|EEQ62277.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
          Length = 202

 Score = 90.5 bits (223), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 49/143 (34%), Positives = 76/143 (53%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  A+ +A  AA   ++P+G V V   +II+R  NR    K V +HAEI++I+  C+ L
Sbjct: 57  FMGEAIRQAHKAAALGDVPIGCVIVRQGQIIARGYNRRNADKSVLSHAEIISIKRACKKL 116

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  +YVTLEPC MC+ AI  ARI R+  G  N K G   +          +H  
Sbjct: 117 GDWRLEDCTMYVTLEPCPMCSGAIVQARIPRVVIGCMNAKAGCAGSVLDLLHEPGFNHQV 176

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           +   G+  +    ++++FF++ R
Sbjct: 177 DTRAGVLGEECSGMMKEFFRKIR 199


>gi|304413544|ref|ZP_07395017.1| CMP/dCMP deaminase [Candidatus Regiella insecticola LSR1]
 gi|304284387|gb|EFL92780.1| CMP/dCMP deaminase [Candidatus Regiella insecticola LSR1]
          Length = 181

 Score = 90.5 bits (223), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 51/124 (41%), Positives = 67/124 (54%), Gaps = 1/124 (0%)

Query: 23  EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEP 82
           E+PVGAV VL NKII    N+     D +AHAEI+A+R   +      LP+  LYVTLEP
Sbjct: 47  EVPVGAVLVLQNKIIGEGWNQPIIHHDPSAHAEIMALRQAGQQQKNYRLPDATLYVTLEP 106

Query: 83  CTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQ 142
           C MCA A+  +RI RL YGA++ K G +            +H  EI  G+      Q++ 
Sbjct: 107 CVMCAGAMIHSRISRLVYGANDNKIGAV-GALTLLNHPAMNHQVEITAGVLVDACSQMLS 165

Query: 143 DFFK 146
            FF 
Sbjct: 166 TFFS 169


>gi|326317008|ref|YP_004234680.1| CMP/dCMP deaminase zinc-binding protein [Acidovorax avenae subsp.
           avenae ATCC 19860]
 gi|323373844|gb|ADX46113.1| CMP/dCMP deaminase zinc-binding protein [Acidovorax avenae subsp.
           avenae ATCC 19860]
          Length = 484

 Score = 90.5 bits (223), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 54/140 (38%), Positives = 74/140 (52%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  AL+EA  AA R EIPVGAV V   ++++R  N      D TAHAEI+A+R     L
Sbjct: 22  WMRVALQEAAEAAARGEIPVGAVVVRGGELVARGSNAPIAGHDPTAHAEIVALRAAAGRL 81

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L    LYVTLEPC MC+ A+  AR+ R+ YGA + K G   +    +     +H  
Sbjct: 82  GNYRLDGCTLYVTLEPCAMCSGAMLHARLDRVVYGAPDAKTGAAGSVVDLFAQPALNHHT 141

Query: 127 EIYPGISEQRSRQIIQDFFK 146
            I  G+  Q    ++  FF+
Sbjct: 142 RIEGGVLAQECGALLSGFFQ 161


>gi|312126379|ref|YP_003991253.1| cmp/dcmp deaminase zinc-binding protein [Caldicellulosiruptor
           hydrothermalis 108]
 gi|311776398|gb|ADQ05884.1| CMP/dCMP deaminase zinc-binding protein [Caldicellulosiruptor
           hydrothermalis 108]
          Length = 171

 Score = 90.5 bits (223), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 52/132 (39%), Positives = 74/132 (56%), Gaps = 3/132 (2%)

Query: 18  AALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLY 77
           A+  N+IPV A  V N KIIS   N +   K    HAEILAI      LS + L   +++
Sbjct: 42  ASRSNDIPVAAAVVKNGKIISIKRNDS---KKAIYHAEILAIIDATSKLSTKDLRSCEMF 98

Query: 78  VTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRS 137
           VT EPC MC +AI L++++RLY+GA + K G  E+          +H  E+  GI E   
Sbjct: 99  VTKEPCPMCMSAIVLSKVKRLYFGARDFKMGAAESCFNLSQNPFLNHKVEVIGGICEDEC 158

Query: 138 RQIIQDFFKERR 149
           R +++ FF+E+R
Sbjct: 159 RLLLKRFFEEKR 170


>gi|189350770|ref|YP_001946398.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia
           multivorans ATCC 17616]
 gi|189334792|dbj|BAG43862.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia
           multivorans ATCC 17616]
          Length = 159

 Score = 90.5 bits (223), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 47/126 (37%), Positives = 70/126 (55%)

Query: 22  NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81
            E+PVGAV V  +++++R  N      D +AHAE+ A+RM  + L    +P  +LYVTLE
Sbjct: 15  GEVPVGAVLVRGDEVLARGFNHPIGGHDPSAHAEMAALRMAAQHLQNYRMPGCELYVTLE 74

Query: 82  PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141
           PC MCA AI  ARI R+ +GA++PK G   +    +     +H  E+  G+        +
Sbjct: 75  PCLMCAGAIMHARIARVVFGAADPKTGVCGSVMDAFANPQLNHHTEVVGGVLAHECGAAL 134

Query: 142 QDFFKE 147
           + FF E
Sbjct: 135 KSFFAE 140


>gi|302530974|ref|ZP_07283316.1| cytidine and deoxycytidylate deaminase [Streptomyces sp. AA4]
 gi|302439869|gb|EFL11685.1| cytidine and deoxycytidylate deaminase [Streptomyces sp. AA4]
          Length = 155

 Score = 90.5 bits (223), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 50/129 (38%), Positives = 72/129 (55%), Gaps = 2/129 (1%)

Query: 23  EIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEI-LPEVDLYVTL 80
           ++P+GAV    + + ++ A N   EL D TAHAEILA+R   R       L    L VTL
Sbjct: 23  DVPIGAVVFDPDGRPLAAARNARVELADPTAHAEILALRAAAREFGDGWRLEGCTLAVTL 82

Query: 81  EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140
           EPCTMCA A+ LAR+ RL +GA  PK G + +          +H PE++ G+ E     +
Sbjct: 83  EPCTMCAGALVLARVARLVFGAWEPKTGAVSSLWDVVRDRRLNHRPEVHGGVLESDCAAL 142

Query: 141 IQDFFKERR 149
           ++ +F +RR
Sbjct: 143 LEAYFADRR 151


>gi|221198274|ref|ZP_03571320.1| tRNA-specific adenosine deaminase [Burkholderia multivorans CGD2M]
 gi|221208213|ref|ZP_03581217.1| tRNA-specific adenosine deaminase [Burkholderia multivorans CGD2]
 gi|221171861|gb|EEE04304.1| tRNA-specific adenosine deaminase [Burkholderia multivorans CGD2]
 gi|221182206|gb|EEE14607.1| tRNA-specific adenosine deaminase [Burkholderia multivorans CGD2M]
          Length = 187

 Score = 90.5 bits (223), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 53/141 (37%), Positives = 77/141 (54%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  AL  A+ A    E+PVGAV V  +++++R  N      D +AHAE+ A+RM  + L
Sbjct: 28  FMRLALAAAEEARAAGEVPVGAVLVRGDEVLARGFNHPIGGHDPSAHAEMAALRMAAQHL 87

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               +P  +LYVTLEPC MCA AI  ARI R+ +GA++PK G   +    +     +H  
Sbjct: 88  QNYRMPGCELYVTLEPCLMCAGAIMHARIARVVFGAADPKTGVCGSVMDAFANPQLNHHT 147

Query: 127 EIYPGISEQRSRQIIQDFFKE 147
           E+  G+        ++ FF E
Sbjct: 148 EVVGGVLANECGAALKSFFAE 168


>gi|167626885|ref|YP_001677385.1| zinc-binding protein [Francisella philomiragia subsp. philomiragia
           ATCC 25017]
 gi|167596886|gb|ABZ86884.1| zinc-binding protein [Francisella philomiragia subsp. philomiragia
           ATCC 25017]
          Length = 142

 Score = 90.5 bits (223), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 50/142 (35%), Positives = 79/142 (55%), Gaps = 1/142 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  A E+A  A    E+P+GAV V +N+I+++  N+   L D TAHAEIL +R   + L 
Sbjct: 1   MQKAYEQALLAYKAGEVPIGAVLVKDNQIVAQDFNKTIMLNDPTAHAEILVLRQAAKELE 60

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
              L    LYVTLEPC MC   +  AR+  L Y   + +  GI +  + +   + +H+ +
Sbjct: 61  NYRLVNTKLYVTLEPCIMCLGGLIQARVSELVYACDDTR-VGIFSREKLHQSKSINHNLK 119

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
           +  G+  +   ++++DFFK RR
Sbjct: 120 VTSGVMIEECSKLLRDFFKLRR 141


>gi|325191113|emb|CCA25599.1| SUMO ligase putative [Albugo laibachii Nc14]
          Length = 182

 Score = 90.5 bits (223), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 55/143 (38%), Positives = 81/143 (56%), Gaps = 9/143 (6%)

Query: 11  ALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS--- 67
           ALEEA+ A +R E+PVG VAV  N+IIS A NR  EL + T HAE++AI     I+S   
Sbjct: 4   ALEEAERALVRGEVPVGCVAVYQNQIISFASNRTNELCNATKHAELVAIDY---IVSNYN 60

Query: 68  --QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT-LATCHH 124
             + I  E   YVT EPC MCAAA+   ++ R+ +G  N + GG  +    +   A    
Sbjct: 61  NTRAIFQETTFYVTCEPCIMCAAALLQCKVVRVVFGCQNFRFGGCGSVLSLHEPTANIPR 120

Query: 125 SPEIYPGISEQRSRQIIQDFFKE 147
           +   +PGI    + +++Q F+++
Sbjct: 121 TFSCHPGILRIEAIELLQRFYEQ 143


>gi|115352007|ref|YP_773846.1| CMP/dCMP deaminase [Burkholderia ambifaria AMMD]
 gi|115281995|gb|ABI87512.1| tRNA-adenosine deaminase [Burkholderia ambifaria AMMD]
          Length = 193

 Score = 90.5 bits (223), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 47/122 (38%), Positives = 68/122 (55%)

Query: 24  IPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83
           +PVGAV V  +++I+R  N      D +AHAE+ A+RM  + L    +P  +LYVTLEPC
Sbjct: 51  VPVGAVLVCGDEVIARGFNHPIGGHDPSAHAEMAALRMAAQHLQNYRMPGCELYVTLEPC 110

Query: 84  TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQD 143
            MCA AI  ARI R+ YGA++PK G   +    +     +H  E+  G+        ++ 
Sbjct: 111 LMCAGAIMHARIARVVYGAADPKTGACGSVIDAFANPQLNHHTEVTGGVLADECGAALKS 170

Query: 144 FF 145
           FF
Sbjct: 171 FF 172


>gi|229492640|ref|ZP_04386443.1| tRNA-specific adenosine deaminase [Rhodococcus erythropolis SK121]
 gi|229320626|gb|EEN86444.1| tRNA-specific adenosine deaminase [Rhodococcus erythropolis SK121]
          Length = 153

 Score = 90.5 bits (223), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 50/137 (36%), Positives = 74/137 (54%), Gaps = 2/137 (1%)

Query: 15  AQNAALRNEIPVGAVAVLNNKI-ISRAGNRNRELKDVTAHAEILAIRMGCRILSQEI-LP 72
           A  +A   ++PVGAV    + + ++RA N      D TAHAEILA+R   +       L 
Sbjct: 16  AARSASDADVPVGAVVFDADGVEVARASNAREASSDPTAHAEILALRAAAKTYGDGWRLE 75

Query: 73  EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGI 132
              L VTLEPCTMCA A+ LAR+ R+ +GA  PK G + +           + P++  G+
Sbjct: 76  GATLAVTLEPCTMCAGALVLARVSRVVFGAWEPKTGAVGSLWDVVRDKRLTYRPQVRGGV 135

Query: 133 SEQRSRQIIQDFFKERR 149
            E     +++DFF+E+R
Sbjct: 136 LEDECAGLLEDFFREQR 152


>gi|326470308|gb|EGD94317.1| tRNA-specific adenosine deaminase subunit Tad2p/ADAT2 [Trichophyton
           tonsurans CBS 112818]
 gi|326481147|gb|EGE05157.1| cytidine and deoxycytidylate deaminase [Trichophyton equinum CBS
           127.97]
          Length = 189

 Score = 90.1 bits (222), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 49/145 (33%), Positives = 75/145 (51%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           + K  VFM  AL+ A+ A    E PVG V V  +++I    N   +  + T HAE LAI 
Sbjct: 7   LSKHEVFMKMALKMAETALAVGETPVGCVLVNKDRVIGSGMNDTNKSLNGTRHAEFLAIE 66

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              R   + I  E DLYVT+EPC MCA+A+   +IR +Y+G +N + GG       ++  
Sbjct: 67  EALRSYPRSIFRETDLYVTVEPCIMCASALRQYQIRSVYFGCANERFGGTGGVLTLHSDP 126

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFF 145
                  +Y GI  + +  +++ F+
Sbjct: 127 AIDQPYPVYGGIYRKEAIMLLRKFY 151


>gi|307328842|ref|ZP_07608012.1| CMP/dCMP deaminase zinc-binding [Streptomyces violaceusniger Tu
           4113]
 gi|306885507|gb|EFN16523.1| CMP/dCMP deaminase zinc-binding [Streptomyces violaceusniger Tu
           4113]
          Length = 166

 Score = 90.1 bits (222), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 53/141 (37%), Positives = 73/141 (51%), Gaps = 1/141 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  ALEEA  A    ++PVGAV +  +  ++ R  N      D TAHAE+LA+R     L
Sbjct: 25  MRLALEEAVRAPETGDVPVGAVVLGPDGSVLGRGRNEREAHGDPTAHAEVLALRAAAHHL 84

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L    L VTLEPCTMCA AI L+R+ RL YGA + K G + +          +H P
Sbjct: 85  GGWRLTGCTLVVTLEPCTMCAGAIVLSRLNRLVYGAVDEKAGAVGSLWDVVRDRRLNHRP 144

Query: 127 EIYPGISEQRSRQIIQDFFKE 147
           E+  G+  +     +  FF++
Sbjct: 145 EVIAGVLAEACAAPLTAFFRK 165


>gi|52841949|ref|YP_095748.1| deaminase [Legionella pneumophila subsp. pneumophila str.
           Philadelphia 1]
 gi|52629060|gb|AAU27801.1| deaminase [Legionella pneumophila subsp. pneumophila str.
           Philadelphia 1]
          Length = 141

 Score = 90.1 bits (222), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 56/143 (39%), Positives = 76/143 (53%), Gaps = 3/143 (2%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  A E+A  A    E+PVGAV V  +N+++    N   +  D + HAEI AIR   R L
Sbjct: 1   MQLAYEQAVIARNEGEVPVGAVLVSKDNQLLGVGRNVIEKSHDPSDHAEIRAIRQASRKL 60

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
           +   L +  LYVTLEPC MCA  +  ARI+RL +   + K G    G+ F  L   +HS 
Sbjct: 61  NNHRLLDTTLYVTLEPCVMCAGLMVHARIKRLVFATRDFKTGAA--GSMFNVLHALNHSV 118

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
            I  GI +    Q++ DFF+  R
Sbjct: 119 LIDEGIMQAECSQLLSDFFRNLR 141


>gi|315503317|ref|YP_004082204.1| cmp/dcmp deaminase zinc-binding protein [Micromonospora sp. L5]
 gi|315409936|gb|ADU08053.1| CMP/dCMP deaminase zinc-binding protein [Micromonospora sp. L5]
          Length = 208

 Score = 90.1 bits (222), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 50/124 (40%), Positives = 70/124 (56%), Gaps = 1/124 (0%)

Query: 24  IPVGAVAVLNNKIISRAGNRNRELK-DVTAHAEILAIRMGCRILSQEILPEVDLYVTLEP 82
           +PVGAV    +      G   REL  D TAHAE+LA+R   + L +  L +  L VTLEP
Sbjct: 85  VPVGAVLYGPDGAELAIGRNERELTGDPTAHAEVLALRRAAQRLGRWRLDDCTLVVTLEP 144

Query: 83  CTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQ 142
           CTMCA AI+LAR+  + +GA  PK G + +           H PE+Y G+ E+ S  +++
Sbjct: 145 CTMCAGAIALARVSTVVFGAWEPKTGAVGSLWDVLRDRRVTHRPEVYGGVLERESATLLR 204

Query: 143 DFFK 146
            FF+
Sbjct: 205 AFFR 208


>gi|46190701|ref|ZP_00121128.2| COG0590: Cytosine/adenosine deaminases [Bifidobacterium longum
           DJO10A]
 gi|189440344|ref|YP_001955425.1| cytosine/adenosine deaminase [Bifidobacterium longum DJO10A]
 gi|239622901|ref|ZP_04665932.1| conserved hypothetical protein [Bifidobacterium longum subsp.
           infantis CCUG 52486]
 gi|312133678|ref|YP_004001017.1| cumb [Bifidobacterium longum subsp. longum BBMN68]
 gi|317482318|ref|ZP_07941338.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Bifidobacterium sp. 12_1_47BFAA]
 gi|189428779|gb|ACD98927.1| Cytosine/adenosine deaminase [Bifidobacterium longum DJO10A]
 gi|239514898|gb|EEQ54765.1| conserved hypothetical protein [Bifidobacterium longum subsp.
           infantis CCUG 52486]
 gi|291517778|emb|CBK71394.1| tRNA-adenosine deaminase [Bifidobacterium longum subsp. longum F8]
 gi|311772943|gb|ADQ02431.1| CumB [Bifidobacterium longum subsp. longum BBMN68]
 gi|316916198|gb|EFV37600.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Bifidobacterium sp. 12_1_47BFAA]
 gi|320459488|dbj|BAJ70109.1| putative cytidine/deoxycytidine deaminase [Bifidobacterium longum
           subsp. infantis ATCC 15697]
          Length = 149

 Score = 90.1 bits (222), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 55/141 (39%), Positives = 74/141 (52%), Gaps = 3/141 (2%)

Query: 11  ALEEAQNAALRNEIPVGAVAVLN--NKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQ 68
           ALE A  AA   ++PVGAV VL+   +I+ R  N      D  AHAEI+A+R   + L  
Sbjct: 10  ALELAGQAAAAGDVPVGAV-VLDAAGQIVGRGYNTREADGDPLAHAEIIAMRQAAQALGA 68

Query: 69  EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEI 128
             L +  L VTLEPC MCA A     I  + +GA +PK G   +           HSPE+
Sbjct: 69  WNLADCTLAVTLEPCPMCAGACIQTHIGTIAFGAWDPKLGACGSIWDIPRDPHIGHSPEV 128

Query: 129 YPGISEQRSRQIIQDFFKERR 149
           + G+ E   + I+ DFF +RR
Sbjct: 129 HGGVLEGECQSILTDFFAQRR 149


>gi|323525792|ref|YP_004227945.1| CMP/dCMP deaminase zinc-binding protein [Burkholderia sp. CCGE1001]
 gi|323382794|gb|ADX54885.1| CMP/dCMP deaminase zinc-binding protein protein [Burkholderia sp.
           CCGE1001]
          Length = 227

 Score = 89.7 bits (221), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 46/122 (37%), Positives = 69/122 (56%)

Query: 24  IPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83
           +PVGAV V  +++I++  N      D +AHAE++A+R   +I+    LP  +LYVTLEPC
Sbjct: 72  VPVGAVLVRGDEVIAKGFNHPIGAHDPSAHAEMIALRTAAQIVENYRLPGCELYVTLEPC 131

Query: 84  TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQD 143
            MCA AI  ARI R+ +GA +PK G   +    +     +H  E+  G+ E      ++ 
Sbjct: 132 LMCAGAIMHARIARVVFGARDPKTGACGSVVDAFANPQLNHHTEVVGGVLESECGAALKS 191

Query: 144 FF 145
           FF
Sbjct: 192 FF 193


>gi|117617810|ref|YP_857319.1| tRNA-specific adenosine deaminase [Aeromonas hydrophila subsp.
           hydrophila ATCC 7966]
 gi|117559217|gb|ABK36165.1| tRNA-specific adenosine deaminase [Aeromonas hydrophila subsp.
           hydrophila ATCC 7966]
          Length = 179

 Score = 89.7 bits (221), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 52/143 (36%), Positives = 74/143 (51%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  A+  A  A    EIPVGAV VL  +++    NR+    D  AHAE++AIR     L
Sbjct: 19  WMRHAMALAARAEGIGEIPVGAVLVLGGEVVGEGWNRSISEHDACAHAEVMAIRAAGVRL 78

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  LYVTLEPC MCA A+  +R++R+ YGA + K G   +  +       +H  
Sbjct: 79  QNYRLLDTTLYVTLEPCCMCAGALIHSRVKRVVYGARDLKTGAAGSVFEILQDPRHNHGV 138

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+  G+        + DFF+ RR
Sbjct: 139 ELTGGVLADACSAQLSDFFRRRR 161


>gi|23466072|ref|NP_696675.1| cytidine and deoxycytidylate deaminase [Bifidobacterium longum
           NCC2705]
 gi|213693307|ref|YP_002323893.1| CMP/dCMP deaminase, zinc-binding [Bifidobacterium longum subsp.
           infantis ATCC 15697]
 gi|23326799|gb|AAN25311.1| possible cytidine and deoxycytidylate deaminase [Bifidobacterium
           longum NCC2705]
 gi|213524768|gb|ACJ53515.1| CMP/dCMP deaminase, zinc-binding [Bifidobacterium longum subsp.
           infantis ATCC 15697]
          Length = 158

 Score = 89.7 bits (221), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 55/141 (39%), Positives = 74/141 (52%), Gaps = 3/141 (2%)

Query: 11  ALEEAQNAALRNEIPVGAVAVLN--NKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQ 68
           ALE A  AA   ++PVGAV VL+   +I+ R  N      D  AHAEI+A+R   + L  
Sbjct: 19  ALELAGQAAAAGDVPVGAV-VLDAAGQIVGRGYNTREADGDPLAHAEIIAMRQAAQALGA 77

Query: 69  EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEI 128
             L +  L VTLEPC MCA A     I  + +GA +PK G   +           HSPE+
Sbjct: 78  WNLADCTLAVTLEPCPMCAGACIQTHIGTIAFGAWDPKLGACGSIWDIPRDPHIGHSPEV 137

Query: 129 YPGISEQRSRQIIQDFFKERR 149
           + G+ E   + I+ DFF +RR
Sbjct: 138 HGGVLEGECQSILTDFFAQRR 158


>gi|84495278|ref|ZP_00994397.1| possible cytidine and deoxycytidylate deaminase [Janibacter sp.
           HTCC2649]
 gi|84384771|gb|EAQ00651.1| possible cytidine and deoxycytidylate deaminase [Janibacter sp.
           HTCC2649]
          Length = 143

 Score = 89.7 bits (221), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 55/143 (38%), Positives = 73/143 (51%), Gaps = 1/143 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELK-DVTAHAEILAIRMGCRIL 66
           M  AL+ A  A    ++PVGAV +     +   G   RE+  D TAHAE++A+R   R  
Sbjct: 1   MRHALDLAVRAGSAGDVPVGAVVLDPGGAVIGEGWNLREVDADPTAHAEVVALRAAARHT 60

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  L VTLEPC MCA A  LARI R+  GA +PK G   +           H  
Sbjct: 61  GSWRLEDCTLVVTLEPCPMCAGAAMLARISRIVLGAWDPKLGATGSVWDVVRDRRATHRI 120

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+  G+ E  + Q++ DFF ERR
Sbjct: 121 EVVGGVLEAEASQLLLDFFGERR 143


>gi|146293740|ref|YP_001184164.1| CMP/dCMP deaminase, zinc-binding [Shewanella putrefaciens CN-32]
 gi|145565430|gb|ABP76365.1| tRNA-adenosine deaminase [Shewanella putrefaciens CN-32]
          Length = 164

 Score = 89.7 bits (221), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 51/143 (35%), Positives = 73/143 (51%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  A++ A+ A    E+PVGAV V + + I+   N +    D TAHAEIL +R   + L
Sbjct: 5   WMQVAMQMAEKAEAAGEVPVGAVLVKDGQQIATGYNLSISQHDPTAHAEILCLRSAGKKL 64

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  LY+TLEPC MCA A+  +RI R+ YGA + K G              +H  
Sbjct: 65  ENYRLLDATLYITLEPCAMCAGAMVHSRIARVVYGARDEKTGAAGTVVNLLQHPAFNHQV 124

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+  G+  +     +  FFK RR
Sbjct: 125 EVTSGVLAEACSAQLSRFFKRRR 147


>gi|315644422|ref|ZP_07897555.1| CMP/dCMP deaminase zinc-binding protein [Paenibacillus vortex V453]
 gi|315280172|gb|EFU43465.1| CMP/dCMP deaminase zinc-binding protein [Paenibacillus vortex V453]
          Length = 163

 Score = 89.7 bits (221), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 51/143 (35%), Positives = 74/143 (51%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  A+ EA+ A    E+P+GAV V  ++II R  N      D TAHAE++AIR   + L
Sbjct: 19  WMREAIAEARKAEELGEVPIGAVIVRGDEIIGRGYNLRETTYDGTAHAEMVAIREASQHL 78

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  LYVTLEPC MCA AI  +R+ +L YG  +PK G              +H  
Sbjct: 79  GAWRLLDCRLYVTLEPCPMCAGAIVQSRVPQLIYGTGDPKAGCAGTLMNLLQEPRFNHRT 138

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
            +  G+ ++    ++  FF+  R
Sbjct: 139 TVIDGVLQEECASLLTQFFRRLR 161


>gi|229819017|ref|YP_002880543.1| CMP/dCMP deaminase zinc-binding [Beutenbergia cavernae DSM 12333]
 gi|229564930|gb|ACQ78781.1| CMP/dCMP deaminase zinc-binding [Beutenbergia cavernae DSM 12333]
          Length = 158

 Score = 89.7 bits (221), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 53/128 (41%), Positives = 71/128 (55%), Gaps = 1/128 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +  ALE A+ A   +++PVGAV +  + ++I R  NR     D TAHAE++AIR     L
Sbjct: 7   IGLALELARGALETDDVPVGAVVLGPDGEVIGRGANRREADDDPTAHAEMIAIREAAAAL 66

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
            Q  L    L VTLEPCTMCA A  LAR+ RL +GA +PK G   + T        +H  
Sbjct: 67  GQWRLEGCTLAVTLEPCTMCAGATVLARLPRLVFGAYDPKAGAAGSVTDVVRDPRLNHRV 126

Query: 127 EIYPGISE 134
           E+  G+ E
Sbjct: 127 EVTGGVRE 134


>gi|189485590|ref|YP_001956531.1| tRNA-specific adenosine deaminase [uncultured Termite group 1
           bacterium phylotype Rs-D17]
 gi|170287549|dbj|BAG14070.1| tRNA-specific adenosine deaminase [uncultured Termite group 1
           bacterium phylotype Rs-D17]
          Length = 149

 Score = 89.7 bits (221), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 54/142 (38%), Positives = 79/142 (55%), Gaps = 3/142 (2%)

Query: 11  ALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEI 70
           AL+EA  A    E+P+GAV V +NKII+R  N+   L D TAHAEI+A+R   + L    
Sbjct: 4   ALKEASKARESREVPIGAVIVKDNKIIARGFNKCIALSDPTAHAEIVALRKAAKKLKNYR 63

Query: 71  LPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYP 130
           L +   Y T+EPC MCA A++ ARI+++ +GA + K    +N  +   +        I  
Sbjct: 64  LNDCYAYATIEPCLMCAGALAKARIKKIIFGAFDKKADCYKNILKTGDIKKLSRRLVIVG 123

Query: 131 GISEQRSRQ---IIQDFFKERR 149
              +  S +   II+DFFK+ R
Sbjct: 124 KKEKHLSAECANIIKDFFKKIR 145


>gi|304410027|ref|ZP_07391646.1| CMP/dCMP deaminase zinc-binding [Shewanella baltica OS183]
 gi|307302260|ref|ZP_07582018.1| CMP/dCMP deaminase zinc-binding [Shewanella baltica BA175]
 gi|304351436|gb|EFM15835.1| CMP/dCMP deaminase zinc-binding [Shewanella baltica OS183]
 gi|306914298|gb|EFN44719.1| CMP/dCMP deaminase zinc-binding [Shewanella baltica BA175]
          Length = 175

 Score = 89.7 bits (221), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 52/143 (36%), Positives = 73/143 (51%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  A+  A+NA    E+PVGAV V + + I+   N +    D +AHAEIL +R   R++
Sbjct: 16  WMQVAMLMAENAEAEGEVPVGAVLVKDGQQIATGYNLSISQHDPSAHAEILCLREAGRLV 75

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  LYVTLEPC MCA A+  +RI R+ +GA + K G              +H  
Sbjct: 76  ENYRLLDATLYVTLEPCAMCAGAMVHSRIARVVFGARDEKTGAAGTVVNLLQHPAFNHQV 135

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+  GI        +  FFK RR
Sbjct: 136 EVTSGILADACSAQLSRFFKRRR 158


>gi|78485955|ref|YP_391880.1| cytidine/deoxycytidylate deaminase, zinc-binding region
           [Thiomicrospira crunogena XCL-2]
 gi|78364241|gb|ABB42206.1| tRNA-adenosine deaminase [Thiomicrospira crunogena XCL-2]
          Length = 166

 Score = 89.7 bits (221), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 50/143 (34%), Positives = 80/143 (55%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M+ AL  A+ A  + EIPVGAV V ++K+I+   N+  +  D TAHAE++A+R      
Sbjct: 17  WMTHALSLAKKAEQQGEIPVGAVLVKDSKLIAEGWNQTIQAHDPTAHAEVVALRKAGIEE 76

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L ++ LYVTLEPC MCA A+  AR++RL   A + + G   +          +H  
Sbjct: 77  ENYRLNDLTLYVTLEPCPMCAGAMVHARLKRLVIAAKDFRTGAAGSLINLVQEPRLNHQV 136

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           +   G+ E  + +++  FF++RR
Sbjct: 137 KTDFGVLESEASEMLSGFFRKRR 159


>gi|149926554|ref|ZP_01914815.1| putative deaminase [Limnobacter sp. MED105]
 gi|149824917|gb|EDM84131.1| putative deaminase [Limnobacter sp. MED105]
          Length = 256

 Score = 89.7 bits (221), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 52/145 (35%), Positives = 76/145 (52%), Gaps = 2/145 (1%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  AL++A+ AA   E+P+GA  V++ K ++ A N    L D  AHAE+ AIR  C+ +
Sbjct: 24  WMELALQQARLAAQAGEVPIGAAVVIDGKAVADAHNAPVLLNDACAHAEVQAIRQACQAI 83

Query: 67  SQEIL-PEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPK-GGGIENGTQFYTLATCHH 124
               L  +  LYVTL+PC MC  AI  ARI R+  G +  +  G ++     +  A   H
Sbjct: 84  GNYRLGAQATLYVTLQPCLMCIGAILHARIGRVVVGCAQSRYNGDLKQSLSVFEQAQAWH 143

Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149
                 G   Q S +++  FFK RR
Sbjct: 144 PCAFETGCMAQESEELLGSFFKARR 168


>gi|148242392|ref|YP_001227549.1| tRNA-specific adenosine deaminase [Synechococcus sp. RCC307]
 gi|147850702|emb|CAK28196.1| tRNA-specific adenosine deaminase [Synechococcus sp. RCC307]
          Length = 183

 Score = 89.7 bits (221), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 49/144 (34%), Positives = 75/144 (52%), Gaps = 1/144 (0%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           +M   L  A  A  R E+PV AV +    + I    NR    +D   HAE++A+R    +
Sbjct: 27  WMDRLLRLAAKAGQRGEVPVAAVVIDPLGRAIGWGSNRREAAQDPLGHAELVALRQASSL 86

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
                  +  L VTLEPC MCA A+  AR+ R+ +GAS+PK G +       T A+ HH 
Sbjct: 87  RRDWRFNQHTLLVTLEPCPMCAGALVQARMGRVVFGASDPKRGALGGCLNLSTDASAHHH 146

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
            E+  G+  +  R+ +Q +F+++R
Sbjct: 147 MEVIGGVRGEACREQLQAWFRQQR 170


>gi|241764554|ref|ZP_04762572.1| CMP/dCMP deaminase zinc-binding [Acidovorax delafieldii 2AN]
 gi|241365998|gb|EER60615.1| CMP/dCMP deaminase zinc-binding [Acidovorax delafieldii 2AN]
          Length = 454

 Score = 89.7 bits (221), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 45/127 (35%), Positives = 69/127 (54%)

Query: 23  EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEP 82
           E+PVGAV V + ++I+   N   +  D TAHAEI+A+R     L    L    LYVTLEP
Sbjct: 16  EVPVGAVVVKDGQVIATGRNAPVQSHDPTAHAEIVALRAAAEQLGNYRLDGCTLYVTLEP 75

Query: 83  CTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQ 142
           C MC+ A+  AR+ R+ +GA +PK G   +    +     +H  ++  G+       ++ 
Sbjct: 76  CAMCSGAMLHARVPRVVFGAVDPKTGAAGSVLDLFGYTVLNHHTQVQGGVLAHDCGALLS 135

Query: 143 DFFKERR 149
            FF++RR
Sbjct: 136 TFFRQRR 142


>gi|296819611|ref|XP_002849875.1| tRNA specific adenosine deaminase [Arthroderma otae CBS 113480]
 gi|238840328|gb|EEQ29990.1| tRNA specific adenosine deaminase [Arthroderma otae CBS 113480]
          Length = 190

 Score = 89.7 bits (221), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 50/143 (34%), Positives = 74/143 (51%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
           K  VFM  AL+ A+ A    E PVG V V   ++I    N   +  + T HAE LAI   
Sbjct: 10  KHEVFMKMALKMAETALAAGETPVGCVLVNKGRVIGSGMNDTNKSLNGTRHAEFLAIEEA 69

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
            R   + I  E DLYVT+EPC MCA+A+   RIR +Y+G +N + GG       ++ +  
Sbjct: 70  LRSHPRSIFRETDLYVTVEPCIMCASALRQYRIRSVYFGCANERFGGTGGVLTLHSDSAI 129

Query: 123 HHSPEIYPGISEQRSRQIIQDFF 145
                +Y GI  + +  +++ F+
Sbjct: 130 DPPYPVYGGIFRKEAIMLLRQFY 152


>gi|78066752|ref|YP_369521.1| tRNA-adenosine deaminase [Burkholderia sp. 383]
 gi|107028852|ref|YP_625947.1| CMP/dCMP deaminase, zinc-binding [Burkholderia cenocepacia AU 1054]
 gi|116689989|ref|YP_835612.1| CMP/dCMP deaminase, zinc-binding [Burkholderia cenocepacia HI2424]
 gi|170733328|ref|YP_001765275.1| CMP/dCMP deaminase zinc-binding [Burkholderia cenocepacia MC0-3]
 gi|77967497|gb|ABB08877.1| tRNA-adenosine deaminase [Burkholderia sp. 383]
 gi|105898016|gb|ABF80974.1| tRNA-adenosine deaminase [Burkholderia cenocepacia AU 1054]
 gi|116648078|gb|ABK08719.1| tRNA-adenosine deaminase [Burkholderia cenocepacia HI2424]
 gi|169816570|gb|ACA91153.1| CMP/dCMP deaminase zinc-binding [Burkholderia cenocepacia MC0-3]
          Length = 159

 Score = 89.7 bits (221), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 47/122 (38%), Positives = 68/122 (55%)

Query: 24  IPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83
           +PVGAV V  +++I+R  N      D +AHAE+ A+RM  + L    +P  +LYVTLEPC
Sbjct: 17  VPVGAVLVRGDEVIARGFNHPIGGHDPSAHAEMAALRMAAQHLQNYRMPGCELYVTLEPC 76

Query: 84  TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQD 143
            MCA AI  ARI R+ YGA++PK G   +    +     +H  E+  G+        ++ 
Sbjct: 77  LMCAGAIMHARIARVVYGAADPKTGACGSVIDAFANPQLNHHTEVTGGVLADECGAALKS 136

Query: 144 FF 145
           FF
Sbjct: 137 FF 138


>gi|325519416|gb|EGC98819.1| tRNA-adenosine deaminase [Burkholderia sp. TJI49]
          Length = 193

 Score = 89.7 bits (221), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 47/122 (38%), Positives = 68/122 (55%)

Query: 24  IPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83
           +PVGAV V  +++I+R  N      D +AHAE+ A+RM  + L    +P  +LYVTLEPC
Sbjct: 50  VPVGAVLVRGDEVIARGFNHPIGGHDPSAHAEMAALRMAAQHLQNYRMPGCELYVTLEPC 109

Query: 84  TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQD 143
            MCA AI  ARI R+ YGA++PK G   +    +     +H  E+  G+        ++ 
Sbjct: 110 LMCAGAIMHARIARVVYGAADPKTGACGSVIDAFANPQLNHHTEVTGGVLADECGAALKS 169

Query: 144 FF 145
           FF
Sbjct: 170 FF 171


>gi|227547038|ref|ZP_03977087.1| cytidine and deoxycytidylate deaminase [Bifidobacterium longum
           subsp. infantis ATCC 55813]
 gi|227212455|gb|EEI80344.1| cytidine and deoxycytidylate deaminase [Bifidobacterium longum
           subsp. infantis ATCC 55813]
          Length = 177

 Score = 89.7 bits (221), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 55/141 (39%), Positives = 74/141 (52%), Gaps = 3/141 (2%)

Query: 11  ALEEAQNAALRNEIPVGAVAVLN--NKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQ 68
           ALE A  AA   ++PVGAV VL+   +I+ R  N      D  AHAEI+A+R   + L  
Sbjct: 38  ALELAGQAAAAGDVPVGAV-VLDAAGQIVGRGYNTREADGDPLAHAEIIAMRQAAQALGA 96

Query: 69  EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEI 128
             L +  L VTLEPC MCA A     I  + +GA +PK G   +           HSPE+
Sbjct: 97  WNLADCTLAVTLEPCPMCAGACIQTHIGTIAFGAWDPKLGACGSIWDIPRDPHIGHSPEV 156

Query: 129 YPGISEQRSRQIIQDFFKERR 149
           + G+ E   + I+ DFF +RR
Sbjct: 157 HGGVLEGECQSILTDFFAQRR 177


>gi|261392718|emb|CAX50291.1| tRNA-specific adenosine deaminase [Neisseria meningitidis 8013]
          Length = 239

 Score = 89.7 bits (221), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 53/143 (37%), Positives = 78/143 (54%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  AL +A+ ++   EIPVGAV V + KII+ A N      +V+ HAEI A+      +
Sbjct: 95  FMCEALRQAEQSSADGEIPVGAVIVSDGKIIASAHNTCIADCNVSRHAEINALAQAGSEM 154

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L   D+Y+TLEPC MCA+A+  ARIRR+ YGA+ PK G   +    +     +   
Sbjct: 155 QNYRLDGCDIYITLEPCAMCASALIQARIRRVIYGAAEPKTGAAGSIVNLFADKRLNTHT 214

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
            I  GI ++    ++  FF+ +R
Sbjct: 215 AIRGGILQEECCAVLSRFFQNKR 237


>gi|307544260|ref|YP_003896739.1| CMP/dCMP deaminase, zinc-binding [Halomonas elongata DSM 2581]
 gi|307216284|emb|CBV41554.1| CMP/dCMP deaminase, zinc-binding [Halomonas elongata DSM 2581]
          Length = 155

 Score = 89.7 bits (221), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 53/150 (35%), Positives = 78/150 (52%), Gaps = 1/150 (0%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAI 59
           M+    +M  A+++A+ A    E+PVGAV V    +I+    N      D +AHAEI A+
Sbjct: 1   MRSDEYYMHRAMDQARRAEAAGEVPVGAVVVDRAGEIVGSGFNAPVSDHDPSAHAEIRAL 60

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
           R     L    L    L+VTLEPC MC  AI  AR+ R+ YGA+ P+ G +E+    +  
Sbjct: 61  RDAGTRLGNYRLDGCTLFVTLEPCLMCTGAIIHARLARVVYGAAEPRSGMVESRANLFAQ 120

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
              +H  E+  G+   R  + ++ FF ERR
Sbjct: 121 PWYNHRVEVVGGVLAPRIAKHLKAFFAERR 150


>gi|282863444|ref|ZP_06272503.1| CMP/dCMP deaminase zinc-binding [Streptomyces sp. ACTE]
 gi|282561779|gb|EFB67322.1| CMP/dCMP deaminase zinc-binding [Streptomyces sp. ACTE]
          Length = 142

 Score = 89.7 bits (221), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 54/142 (38%), Positives = 74/142 (52%), Gaps = 1/142 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELK-DVTAHAEILAIRMGCRIL 66
           M  AL EA  AA   ++PVGAV +  +      G+  RE   D TAHAE+LA+R    +L
Sbjct: 1   MRQALHEAAQAASAGDVPVGAVVLGPDGAPLATGHNEREATGDPTAHAEVLALRRAASVL 60

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L    L VTLEPCTMCA A+  +R+ R+ YGA + K G   +          +H P
Sbjct: 61  GGWRLTGCTLVVTLEPCTMCAGALVQSRVARVVYGARDEKAGAAGSLWDVLRDRRLNHRP 120

Query: 127 EIYPGISEQRSRQIIQDFFKER 148
           E+  G+ E+     +  FF+ER
Sbjct: 121 EVVYGVLEETCAAQLTAFFRER 142


>gi|325106234|ref|YP_004275888.1| CMP/dCMP deaminase zinc-binding protein [Pedobacter saltans DSM
           12145]
 gi|324975082|gb|ADY54066.1| CMP/dCMP deaminase zinc-binding protein [Pedobacter saltans DSM
           12145]
          Length = 157

 Score = 89.7 bits (221), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 50/143 (34%), Positives = 74/143 (51%), Gaps = 5/143 (3%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  A +EA  A  ++E+P+GA+ V N K++ R  N    L DVTAHAE+ A       +
Sbjct: 18  FMKEAYKEALLAFDKDEVPIGAIIVANGKVVGRGHNLTERLNDVTAHAEMQAFTSASNTI 77

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
             + L    LYVT+EPC MCA A    +I R+ +GA + K G      Q       H   
Sbjct: 78  GAKYLHNCTLYVTVEPCVMCAGASYWTQISRIVFGALDEKRGYSRLNPQI-----IHPKT 132

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           EI  G+  +    ++++FF ++R
Sbjct: 133 EIVGGVMSEECAALMRNFFLKKR 155


>gi|291459912|ref|ZP_06599302.1| cytidine/deoxycytidylate deaminase family protein [Oribacterium sp.
           oral taxon 078 str. F0262]
 gi|291417253|gb|EFE90972.1| cytidine/deoxycytidylate deaminase family protein [Oribacterium sp.
           oral taxon 078 str. F0262]
          Length = 179

 Score = 89.4 bits (220), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 53/158 (33%), Positives = 74/158 (46%), Gaps = 19/158 (12%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNK-------------------IISRAGNRNREL 47
            M  A+ EA+ A    ++P+G + V + +                   II R  NR    
Sbjct: 11  LMRLAIREAKKAERNGDVPIGCLIVYDGRLPGSRADQRAEEQSIRPGEIIGRGYNRRNRD 70

Query: 48  KDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKG 107
           K    HAEI AI   CR L    L +  + VTLEPC MCA AI  ARI RL +GA NPK 
Sbjct: 71  KSALKHAEISAISKACRRLGDWRLEDCTMIVTLEPCPMCAGAILQARIPRLLFGAENPKA 130

Query: 108 GGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
           G   +      L+  +H  E+ P +  +  ++++ DFF
Sbjct: 131 GFCGSVLDILQLSALNHRVELLPPVLREDCKRLMTDFF 168


>gi|206560408|ref|YP_002231172.1| putative deaminase [Burkholderia cenocepacia J2315]
 gi|198036449|emb|CAR52345.1| putative deaminase [Burkholderia cenocepacia J2315]
          Length = 198

 Score = 89.4 bits (220), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 47/122 (38%), Positives = 68/122 (55%)

Query: 24  IPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83
           +PVGAV V  +++I+R  N      D +AHAE+ A+RM  + L    +P  +LYVTLEPC
Sbjct: 56  VPVGAVLVRGDEVIARGFNHPIGGHDPSAHAEMAALRMAAQQLQNYRMPGCELYVTLEPC 115

Query: 84  TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQD 143
            MCA AI  ARI R+ YGA++PK G   +    +     +H  E+  G+        ++ 
Sbjct: 116 LMCAGAIMHARIARVVYGAADPKTGACGSVIDAFANPQLNHHTEVTGGVLADECGAALKS 175

Query: 144 FF 145
           FF
Sbjct: 176 FF 177


>gi|254247929|ref|ZP_04941250.1| Cytidine/deoxycytidylate deaminase, zinc-binding region
           [Burkholderia cenocepacia PC184]
 gi|124872705|gb|EAY64421.1| Cytidine/deoxycytidylate deaminase, zinc-binding region
           [Burkholderia cenocepacia PC184]
          Length = 162

 Score = 89.4 bits (220), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 47/122 (38%), Positives = 68/122 (55%)

Query: 24  IPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83
           +PVGAV V  +++I+R  N      D +AHAE+ A+RM  + L    +P  +LYVTLEPC
Sbjct: 20  VPVGAVLVRGDEVIARGFNHPIGGHDPSAHAEMAALRMAAQHLQNYRMPGCELYVTLEPC 79

Query: 84  TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQD 143
            MCA AI  ARI R+ YGA++PK G   +    +     +H  E+  G+        ++ 
Sbjct: 80  LMCAGAIMHARIARVVYGAADPKTGACGSVIDAFANPQLNHHTEVTGGVLADECGAALKS 139

Query: 144 FF 145
           FF
Sbjct: 140 FF 141


>gi|327292493|ref|XP_003230945.1| tRNA-specific adenosine deaminase subunit TAD2 [Trichophyton rubrum
           CBS 118892]
 gi|326466882|gb|EGD92335.1| tRNA-specific adenosine deaminase subunit TAD2 [Trichophyton rubrum
           CBS 118892]
          Length = 189

 Score = 89.4 bits (220), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 49/145 (33%), Positives = 75/145 (51%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           + K  VFM  AL+ A+ A    E PVG V V  +++I    N   +  + T HAE LAI 
Sbjct: 7   LSKHEVFMKMALKMAETALAVGETPVGCVLVNKDRVIGSGMNDTNKSLNGTRHAEFLAIE 66

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              R   + I  E DLYVT+EPC MCA+A+   +IR +Y+G +N + GG       ++  
Sbjct: 67  EALRSHPRSIFRETDLYVTVEPCIMCASALRQYQIRSVYFGCANERFGGTGGVLTLHSDP 126

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFF 145
                  +Y GI  + +  +++ F+
Sbjct: 127 AIDQPYPVYGGIYRKEAIMLLRKFY 151


>gi|311742000|ref|ZP_07715810.1| cytidine and deoxycytidylate deaminase [Aeromicrobium marinum DSM
           15272]
 gi|311314493|gb|EFQ84400.1| cytidine and deoxycytidylate deaminase [Aeromicrobium marinum DSM
           15272]
          Length = 149

 Score = 89.4 bits (220), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 53/144 (36%), Positives = 74/144 (51%), Gaps = 3/144 (2%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLN--NKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M  ALEEA+ A    ++PVGAV VL+    +I R  N      D   HAE++A+R     
Sbjct: 7   MRLALEEARAALDTGDVPVGAV-VLDPAGDVIGRGRNTRERDGDPLGHAEVVALREAAER 65

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
             Q  L    L VTLEPCTMCA A+  AR+ RL +GA + K G + +          +H 
Sbjct: 66  TGQWRLEGCTLVVTLEPCTMCAGALVGARVDRLVFGAWDDKAGAVGSLWDVVRDRRLNHR 125

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
           PE+  G+    S  ++++FF   R
Sbjct: 126 PEVVSGVLADESATLLREFFASHR 149


>gi|312621259|ref|YP_004022872.1| cmp/dcmp deaminase zinc-binding protein [Caldicellulosiruptor
           kronotskyensis 2002]
 gi|312201726|gb|ADQ45053.1| CMP/dCMP deaminase zinc-binding protein [Caldicellulosiruptor
           kronotskyensis 2002]
          Length = 143

 Score = 89.4 bits (220), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 52/132 (39%), Positives = 74/132 (56%), Gaps = 3/132 (2%)

Query: 18  AALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLY 77
           A+  N+IPV A  V N KIIS   N   + K    HAEILAI      LS + L   +++
Sbjct: 14  ASRSNDIPVAAAIVKNGKIISIKRN---DSKKAIYHAEILAIIDATSKLSTKDLRNCEMF 70

Query: 78  VTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRS 137
           VT EPC MC +AI L++++RLY+GA + K G  E+          +H  E+  GI E   
Sbjct: 71  VTKEPCPMCMSAIVLSKVKRLYFGARDFKMGAAESCFNLSQNPFLNHKVEVIGGICEDEC 130

Query: 138 RQIIQDFFKERR 149
           R +++ FF+E+R
Sbjct: 131 RLLLKRFFEEKR 142


>gi|134295996|ref|YP_001119731.1| tRNA-adenosine deaminase [Burkholderia vietnamiensis G4]
 gi|134139153|gb|ABO54896.1| tRNA-adenosine deaminase [Burkholderia vietnamiensis G4]
          Length = 197

 Score = 89.4 bits (220), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 47/122 (38%), Positives = 68/122 (55%)

Query: 24  IPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83
           +PVGAV V  +++I+R  N      D +AHAE+ A+RM  + L    +P  +LYVTLEPC
Sbjct: 55  VPVGAVLVRGDEVIARGFNHPIGGHDPSAHAEMAALRMAAQHLQNYRMPGCELYVTLEPC 114

Query: 84  TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQD 143
            MCA AI  ARI R+ YGA++PK G   +    +     +H  E+  G+        ++ 
Sbjct: 115 LMCAGAIMHARIARVVYGAADPKTGACGSVIDAFANPQLNHHTEVTGGVLADECGAALKS 174

Query: 144 FF 145
           FF
Sbjct: 175 FF 176


>gi|319793607|ref|YP_004155247.1| cmp/dcmp deaminase zinc-binding protein [Variovorax paradoxus EPS]
 gi|315596070|gb|ADU37136.1| CMP/dCMP deaminase zinc-binding protein [Variovorax paradoxus EPS]
          Length = 368

 Score = 89.4 bits (220), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 45/126 (35%), Positives = 71/126 (56%)

Query: 24  IPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83
           +PVGAV V + ++I+   N      D +AHAEI A+R G   L    L   +L+VTLEPC
Sbjct: 25  VPVGAVLVKDGQVIATGRNTPVAQHDPSAHAEINALRAGASALGNYRLDGCELFVTLEPC 84

Query: 84  TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQD 143
            MCA A+  +R+ R+ +GA++PK G   +    +     +H  ++  G+  Q    ++Q 
Sbjct: 85  AMCAGAMLHSRLARVVFGATDPKTGAAGSVLDLFAEPRLNHRTQVQGGVLAQECSAVLQG 144

Query: 144 FFKERR 149
           FF++RR
Sbjct: 145 FFQQRR 150


>gi|17541138|ref|NP_502546.1| hypothetical protein JC8.4 [Caenorhabditis elegans]
 gi|6425182|emb|CAB05231.1| C. elegans protein JC8.4, partially confirmed by transcript
           evidence [Caenorhabditis elegans]
          Length = 176

 Score = 89.4 bits (220), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 53/150 (35%), Positives = 84/150 (56%), Gaps = 16/150 (10%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR------ 60
           F+  A E AQ A   +E+PVG V V+N   I R  NR  E  D T HAE++A+       
Sbjct: 13  FLEKAFELAQEALDEDEVPVGCVFVVNGTEIGRGRNRVNETGDPTRHAEMVAVTEMWKEH 72

Query: 61  -MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN--GTQFY 117
             GC    +++L +  LYV+LEPC MC++A+    IR++ YGA NP+ GG+ +    + Y
Sbjct: 73  GTGC----EDLLKKSTLYVSLEPCIMCSSAMYQLGIRKMVYGAENPRFGGVRSVGSAEKY 128

Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
            +     + +I  GI  +RS  +++ F+++
Sbjct: 129 RM---EDNVQIVAGIWSERSVAMLKTFYEK 155


>gi|297200779|ref|ZP_06918176.1| deaminase [Streptomyces sviceus ATCC 29083]
 gi|297147728|gb|EDY56383.2| deaminase [Streptomyces sviceus ATCC 29083]
          Length = 162

 Score = 89.4 bits (220), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 55/143 (38%), Positives = 77/143 (53%), Gaps = 4/143 (2%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRE-LKDVTAHAEILAIRMGCRI 65
           M  AL+EA  A    ++PVGAV +  +   +  AG+  RE + D TAHAE+LAIR     
Sbjct: 22  MRLALDEAGRAG--TDVPVGAVVLSPDGTTVLAAGHNEREAVGDPTAHAEVLAIRRAAAE 79

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           L +  L    L VTLEPCTMCA AI  +R+ R+ YGA + K G   +          +H 
Sbjct: 80  LGEWRLTGCTLVVTLEPCTMCAGAIVQSRVDRVVYGARDEKAGAAGSLWDVVRDRRLNHR 139

Query: 126 PEIYPGISEQRSRQIIQDFFKER 148
           PE+  G+      Q++  FF++R
Sbjct: 140 PEVVEGVLAAECAQLLTAFFRDR 162


>gi|296455106|ref|YP_003662250.1| CMP/dCMP deaminase [Bifidobacterium longum subsp. longum JDM301]
 gi|296184538|gb|ADH01420.1| CMP/dCMP deaminase, zinc-binding protein [Bifidobacterium longum
           subsp. longum JDM301]
          Length = 174

 Score = 89.4 bits (220), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 55/141 (39%), Positives = 74/141 (52%), Gaps = 3/141 (2%)

Query: 11  ALEEAQNAALRNEIPVGAVAVLN--NKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQ 68
           ALE A  AA   ++PVGAV VL+   +I+ R  N      D  AHAEI+A+R   + L  
Sbjct: 35  ALELAGQAAAAGDVPVGAV-VLDAAGQIVGRGYNTREADGDPLAHAEIIAMRQAAQALGA 93

Query: 69  EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEI 128
             L +  L VTLEPC MCA A     I  + +GA +PK G   +           HSPE+
Sbjct: 94  WNLADCTLAVTLEPCPMCAGACIQTHIGTIAFGAWDPKLGACGSIWDIPRDPHIGHSPEV 153

Query: 129 YPGISEQRSRQIIQDFFKERR 149
           + G+ E   + I+ DFF +RR
Sbjct: 154 HGGVLEGECQSILTDFFAQRR 174


>gi|325266384|ref|ZP_08133062.1| tRNA-specific adenosine deaminase [Kingella denitrificans ATCC
           33394]
 gi|324982177|gb|EGC17811.1| tRNA-specific adenosine deaminase [Kingella denitrificans ATCC
           33394]
          Length = 241

 Score = 89.4 bits (220), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 53/143 (37%), Positives = 79/143 (55%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  AL +A  AA   E+PVGAV V    I+++A NR     +V+ HAEILA+    ++L
Sbjct: 97  FMQAALVQAALAAEAGEVPVGAVVVHRGNIVAQAYNRCVADCNVSHHAEILALAQAGQVL 156

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L E D+YV+LEPC MCA A+  AR+ R+ + AS PK G   +    +     +   
Sbjct: 157 GSYRLNECDVYVSLEPCAMCAGALMQARVARVIFAASEPKTGAAGSVVNLFANKALNAHT 216

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
            +  G+    ++ I+Q FF+ +R
Sbjct: 217 AVSGGVLADEAQAILQQFFQNKR 239


>gi|217972561|ref|YP_002357312.1| zinc-binding CMP/dCMP deaminase [Shewanella baltica OS223]
 gi|217497696|gb|ACK45889.1| CMP/dCMP deaminase zinc-binding [Shewanella baltica OS223]
          Length = 175

 Score = 89.4 bits (220), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 51/143 (35%), Positives = 73/143 (51%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  A+  A+NA    E+PVGAV V + + I+   N +    D +AHAEIL +R   R++
Sbjct: 16  WMQVAMLMAENAEAEGEVPVGAVLVKDGQQIATGYNLSISQHDPSAHAEILCLREAGRLV 75

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  LYVTLEPC MCA A+  +RI R+ +GA + K G              +H  
Sbjct: 76  ENYRLLDATLYVTLEPCAMCAGAMVHSRIARVVFGARDEKTGAAGTVVNLLQHPAFNHQV 135

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+  G+        +  FFK RR
Sbjct: 136 EVTSGVLADACSAQLSRFFKRRR 158


>gi|192359003|ref|YP_001981836.1| Cytidine and deoxycytidylate deaminase zinc-binding region
           domain-containing protein [Cellvibrio japonicus Ueda107]
 gi|190685168|gb|ACE82846.1| Cytidine and deoxycytidylate deaminase zinc-binding region domain
           protein [Cellvibrio japonicus Ueda107]
          Length = 201

 Score = 89.4 bits (220), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 51/148 (34%), Positives = 72/148 (48%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           +  + +M  A+  A       E+PVGAV V     I    N+    +D +AHAEI+A+R 
Sbjct: 8   QDDSYWMRRAIALASQGEALGEVPVGAVIVREGIAIGEGFNQPITSRDPSAHAEIVALRQ 67

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
               L    LP   LYVTLEPCTMC  A+  ARI RL YG + PK G + +  +      
Sbjct: 68  AAAHLQNYRLPGATLYVTLEPCTMCVGALVHARITRLVYGTAEPKAGAVTSRARLLDADY 127

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H      G+     +  +  FF++RR
Sbjct: 128 VNHRVSYEGGLMAAECQHQLSHFFQQRR 155


>gi|167563146|ref|ZP_02356062.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia
           oklahomensis EO147]
 gi|167570332|ref|ZP_02363206.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia
           oklahomensis C6786]
          Length = 193

 Score = 89.4 bits (220), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 55/143 (38%), Positives = 77/143 (53%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  ALE A  A    E+PVGAV V  +++I+R  N      D +AHAE+ A+R   R L
Sbjct: 31  YMRMALEAADEARAAGEVPVGAVIVRGDEVIARGFNHPIGGHDPSAHAEMAALRAAARAL 90

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               +P  +LYVTLEPC MC+ AI  ARI R+ +GA +PK G   +    +  A  +H  
Sbjct: 91  RNYRMPGCELYVTLEPCLMCSGAIMHARIARVVFGAPDPKTGACGSVVDAFADARLNHHT 150

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
            +  G+        ++ FF ERR
Sbjct: 151 AVEGGVLADECGAALKSFFAERR 173


>gi|312136100|ref|YP_004003438.1| cmp/dcmp deaminase zinc-binding protein [Caldicellulosiruptor
           owensensis OL]
 gi|311776151|gb|ADQ05638.1| CMP/dCMP deaminase zinc-binding protein [Caldicellulosiruptor
           owensensis OL]
          Length = 143

 Score = 89.0 bits (219), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 51/134 (38%), Positives = 75/134 (55%), Gaps = 3/134 (2%)

Query: 16  QNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVD 75
           + A+  N+IPV A  V + KIIS   N +   K    HAEILAI      LS + L   +
Sbjct: 12  EYASHSNDIPVAAAVVKDGKIISIKRNDS---KKAIYHAEILAIIDATSKLSTKDLRSCE 68

Query: 76  LYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQ 135
           ++VT EPC MC +AI L++++RLY+GA + K G  E+          +H  E+  GI E 
Sbjct: 69  MFVTKEPCPMCMSAIVLSKVKRLYFGARDFKMGAAESCFNLSQHPFLNHKVEVIGGICED 128

Query: 136 RSRQIIQDFFKERR 149
             R +++ FF+E+R
Sbjct: 129 ECRLLLKRFFEEKR 142


>gi|170695254|ref|ZP_02886401.1| CMP/dCMP deaminase zinc-binding [Burkholderia graminis C4D1M]
 gi|170139874|gb|EDT08055.1| CMP/dCMP deaminase zinc-binding [Burkholderia graminis C4D1M]
          Length = 166

 Score = 89.0 bits (219), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 46/124 (37%), Positives = 68/124 (54%)

Query: 22  NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81
            E+PVGAV V  +++I+   N      D +AHAE++A+R   ++     LP  +LYVTLE
Sbjct: 15  GEVPVGAVLVRGDEVIATGFNHPIGAHDPSAHAEMVALRAAAQVAQNYRLPGCELYVTLE 74

Query: 82  PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141
           PC MCA AI  ARI R+ +GA +PK G   +    +     +H  E+  G+ E      +
Sbjct: 75  PCLMCAGAIMHARIARVVFGARDPKTGACGSVVDAFANPQLNHHTEVTGGVLESECGAAL 134

Query: 142 QDFF 145
           + FF
Sbjct: 135 KSFF 138


>gi|126657691|ref|ZP_01728845.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [Cyanothece
           sp. CCY0110]
 gi|126620908|gb|EAZ91623.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [Cyanothece
           sp. CCY0110]
          Length = 163

 Score = 89.0 bits (219), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 54/144 (37%), Positives = 74/144 (51%), Gaps = 1/144 (0%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELK-DVTAHAEILAIRMGCRI 65
           +M  AL+ A+ AA   ++PVGAV +     I   G  ++E+  D T HAEI+AIR   + 
Sbjct: 16  WMKEALKLAEIAANLGDVPVGAVIINRQGNILAEGYNSKEVNHDPTGHAEIIAIRQASQT 75

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           L    L E  LYVTLEPC MCA AI  +R+  L YG  + K G I            +H 
Sbjct: 76  LKSWHLEECTLYVTLEPCIMCAGAIIQSRLGLLVYGVDDLKSGSIRTALNLPDSVASNHH 135

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
             +  GI E   RQ ++ +F  +R
Sbjct: 136 LSVLSGILEAECRQQLKKWFINKR 159


>gi|224111764|ref|XP_002315970.1| predicted protein [Populus trichocarpa]
 gi|222865010|gb|EEF02141.1| predicted protein [Populus trichocarpa]
          Length = 1071

 Score = 89.0 bits (219), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 53/103 (51%), Positives = 63/103 (61%)

Query: 2    KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
            K   +FM  AL +A+ AA   E+PVGAV V + KII+R  N   EL+D TAHAE++ IR 
Sbjct: 927  KIDEMFMREALLDAKKAADSWEVPVGAVMVHHGKIIARGYNLVEELRDSTAHAEMICIRE 986

Query: 62   GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASN 104
                L    L E  LYVTLEPC MCA AI  ARI  L +GA N
Sbjct: 987  ASNQLRSWRLSETTLYVTLEPCPMCAGAILQARINTLVWGAPN 1029


>gi|297568295|ref|YP_003689639.1| CMP/dCMP deaminase zinc-binding protein [Desulfurivibrio
           alkaliphilus AHT2]
 gi|296924210|gb|ADH85020.1| CMP/dCMP deaminase zinc-binding protein [Desulfurivibrio
           alkaliphilus AHT2]
          Length = 161

 Score = 89.0 bits (219), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 56/151 (37%), Positives = 82/151 (54%), Gaps = 7/151 (4%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           K    M  ALE A+ AA R E+PVGA+ +    +I++  GNR     D + HAEI+ +R 
Sbjct: 13  KDTSLMHQALEAARAAAARGEVPVGALLIDRQGEILAVDGNRTIGDHDPSGHAEIVVLRR 72

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
               +    L    LYVTLEPC MC   +  ARI RL +GA++PK G +      Y LA 
Sbjct: 73  AAARIGNHRLTGTTLYVTLEPCLMCVGVMIQARIERLVFGANDPKAGAV---VSLYRLAA 129

Query: 122 ---CHHSPEIYPGISEQRSRQIIQDFFKERR 149
               +H  ++  G+  + + Q+++DFF+ RR
Sbjct: 130 DPRLNHRLQVTAGVLARDAGQLLRDFFRARR 160


>gi|295698536|ref|YP_003603191.1| tRNA-specific adenosine deaminase [Candidatus Riesia pediculicola
           USDA]
 gi|291157478|gb|ADD79923.1| tRNA-specific adenosine deaminase [Candidatus Riesia pediculicola
           USDA]
          Length = 171

 Score = 89.0 bits (219), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 52/157 (33%), Positives = 85/157 (54%), Gaps = 13/157 (8%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +KK   +M+ +L+ A+ + +  EIP+GAV +  + I++ +GN      D +AHAEI+ IR
Sbjct: 12  LKKDFFWMNKSLDLAKKSEILGEIPIGAVLIYQDNIVASSGNEVILRNDPSAHAEIIVIR 71

Query: 61  MGCRILSQEILPE-VDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFY-- 117
            G +      L E + +YVT+ PC MC  AI  +RI R+ YG+ N K     N   F+  
Sbjct: 72  EGAKHFKNYRLKENLTIYVTIFPCIMCMGAIFQSRISRVVYGSENYK-----NNLSFFLF 126

Query: 118 -----TLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
                 ++  +    +Y GI  +    I+++FFK+RR
Sbjct: 127 EKNNTNISMNYGHITVYGGILSRSCSSILKNFFKKRR 163


>gi|291455623|ref|ZP_06595013.1| cytidine and deoxycytidylate deaminase family protein
           [Bifidobacterium breve DSM 20213]
 gi|291382551|gb|EFE90069.1| cytidine and deoxycytidylate deaminase family protein
           [Bifidobacterium breve DSM 20213]
          Length = 152

 Score = 89.0 bits (219), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 53/144 (36%), Positives = 73/144 (50%), Gaps = 1/144 (0%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
            M  ALE A+ AA   ++PVGAV V  + +II R  N      D  AHAEI+A+R   R 
Sbjct: 9   MMHGALELAKRAAAAGDVPVGAVVVDADGQIIGRGYNTREADGDPLAHAEIIAMREAARA 68

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           L    L +  L VTLEPC MCA A     I  + +GA + K G   +           H+
Sbjct: 69  LGSWNLSDCTLAVTLEPCPMCAGACVQTHIGTIVFGAWDSKLGACGSIWDIPRDPHIGHA 128

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
           PE++ G++E   + ++  FF  RR
Sbjct: 129 PEVHGGVAEADCQTLLSTFFAHRR 152


>gi|163749537|ref|ZP_02156784.1| cytidine/deoxycytidylate deaminase family protein [Shewanella
           benthica KT99]
 gi|161330647|gb|EDQ01584.1| cytidine/deoxycytidylate deaminase family protein [Shewanella
           benthica KT99]
          Length = 189

 Score = 89.0 bits (219), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 49/143 (34%), Positives = 73/143 (51%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FMS A+E A+ A    E+PVGAV + + +++S   N    L D +AHAE+  +R   +++
Sbjct: 25  FMSMAMEMARKAEAVGEVPVGAVLIKDGELVSAGFNYCIGLHDPSAHAEMQCLRQAGKVI 84

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L    LYVTLEPC MCA A+  +RI RL +GA + K G              +H  
Sbjct: 85  ENYRLLNTTLYVTLEPCAMCAGAMVHSRIERLVFGAKDDKTGAAGTVIDLVRHPAFNHQL 144

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           ++  G+        +  FF+ RR
Sbjct: 145 QVSDGVLADECSAQLSQFFRRRR 167


>gi|320106996|ref|YP_004182586.1| CMP/dCMP deaminase zinc-binding protein [Terriglobus saanensis
           SP1PR4]
 gi|319925517|gb|ADV82592.1| CMP/dCMP deaminase zinc-binding protein [Terriglobus saanensis
           SP1PR4]
          Length = 171

 Score = 89.0 bits (219), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 57/144 (39%), Positives = 75/144 (52%), Gaps = 1/144 (0%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           FM  A+ EAQ A    E+PVGA+ V    +I+SR  NR     D + HAE++A+R     
Sbjct: 9   FMQAAIAEAQAAQAAGEVPVGAIVVSPTGEILSRGQNRVIRDHDPSGHAEMVALRAAGVA 68

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           L    L    LYVTLEPC MCA AI  ARI RL Y A +PK G   +  +       +H 
Sbjct: 69  LENYRLTGCSLYVTLEPCAMCAGAILHARIARLVYAAPDPKAGACGSALEVMNHPRLNHR 128

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
            E+  G+       ++Q FF+ RR
Sbjct: 129 CEVVAGVLADECSTLLQTFFRSRR 152


>gi|254252116|ref|ZP_04945434.1| Cytidine/deoxycytidylate deaminase [Burkholderia dolosa AUO158]
 gi|124894725|gb|EAY68605.1| Cytidine/deoxycytidylate deaminase [Burkholderia dolosa AUO158]
          Length = 206

 Score = 89.0 bits (219), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 47/122 (38%), Positives = 67/122 (54%)

Query: 24  IPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83
           +PVGAV V  +++I+R  N      D +AHAE+ A+RM  + L    +P  +LYVTLEPC
Sbjct: 64  VPVGAVLVRGDEVIARGFNHPIGGHDPSAHAEMAALRMAAQRLQNYRMPGCELYVTLEPC 123

Query: 84  TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQD 143
            MCA AI  ARI R+ YGA +PK G   +    +     +H  E+  G+        ++ 
Sbjct: 124 LMCAGAIMHARIARVVYGAPDPKTGACGSVIDAFANTQLNHHAEVIGGVLADECGAALKS 183

Query: 144 FF 145
           FF
Sbjct: 184 FF 185


>gi|256827679|ref|YP_003151638.1| tRNA-adenosine deaminase [Cryptobacterium curtum DSM 15641]
 gi|256583822|gb|ACU94956.1| tRNA-adenosine deaminase [Cryptobacterium curtum DSM 15641]
          Length = 206

 Score = 89.0 bits (219), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 54/151 (35%), Positives = 76/151 (50%), Gaps = 12/151 (7%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNN------------KIISRAGNRNRELKDVTAHA 54
           +M  AL EA++A    EIP+GAV V               ++I+RAGNR     D   HA
Sbjct: 17  YMQMALNEARHAQGLGEIPIGAVVVYEPIDPATRRPLACPQVIARAGNRRETDADPAGHA 76

Query: 55  EILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           E LA+R   R L    L    +YVTLEPC MCA  +  ARI    +GA +PK G + +  
Sbjct: 77  EFLALREAARRLGVWRLTGCTVYVTLEPCIMCAGLMHQARIDCCVFGAFDPKAGALGSLY 136

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
           + +     +HS  +  G+    S Q+++ FF
Sbjct: 137 RIHEDERLNHSFAVRSGVCADESAQLLRSFF 167


>gi|83647619|ref|YP_436054.1| cytosine/adenosine deaminases [Hahella chejuensis KCTC 2396]
 gi|83635662|gb|ABC31629.1| Cytosine/adenosine deaminases [Hahella chejuensis KCTC 2396]
          Length = 156

 Score = 88.6 bits (218), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 47/128 (36%), Positives = 68/128 (53%)

Query: 22  NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81
           +E+PVGA+ V + +++    N+     D TAHAEI AIR    +     LP   LYVTLE
Sbjct: 15  DEVPVGAILVRDGQVLGEGWNQPIRSHDPTAHAEISAIRKASAVAGNYRLPGSTLYVTLE 74

Query: 82  PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141
           PC MC  A+  AR+ RL +GA   K G + + ++       +   E   G+ EQ   Q++
Sbjct: 75  PCVMCLGALVHARVSRLVFGAYEHKAGAVCSSSRLLDEHNFNWKLEWSGGVLEQPCSQLL 134

Query: 142 QDFFKERR 149
             FF+ RR
Sbjct: 135 SGFFQRRR 142


>gi|311106622|ref|YP_003979475.1| tRNA-specific adenosine deaminase [Achromobacter xylosoxidans A8]
 gi|310761311|gb|ADP16760.1| tRNA-specific adenosine deaminase [Achromobacter xylosoxidans A8]
          Length = 163

 Score = 88.6 bits (218), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 51/127 (40%), Positives = 70/127 (55%), Gaps = 1/127 (0%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           FM  AL+EAQ A    E+PVGA+ V     I+ R  NR     D TAHAEI+A+R   R 
Sbjct: 14  FMELALQEAQAAYDIGEVPVGALVVSAQGDILGRGYNRTIIDHDPTAHAEIVALRGAARA 73

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           L    LP + +YVTLEPC MC  A+  AR+ R+ +GA +PK G   +     ++   +H 
Sbjct: 74  LENYRLPGITVYVTLEPCVMCIGAMLHARLARVVFGAYDPKTGACGSVLDVGSVPKLNHH 133

Query: 126 PEIYPGI 132
             +  G+
Sbjct: 134 TSVTGGV 140


>gi|27904732|ref|NP_777858.1| putative deaminase [Buchnera aphidicola str. Bp (Baizongia
           pistaciae)]
 gi|38372581|sp|Q89AM8|Y236_BUCBP RecName: Full=Uncharacterized protein bbp_236
 gi|27904129|gb|AAO26963.1| putative deaminase [Buchnera aphidicola str. Bp (Baizongia
           pistaciae)]
          Length = 162

 Score = 88.6 bits (218), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 53/143 (37%), Positives = 70/143 (48%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM CA+  A+ + +  E+PVGAV V NN II +  N +    D TAHAEI A+R G + L
Sbjct: 8   FMKCAIFLAKISEMIGEVPVGAVLVFNNTIIGKGLNSSILNHDPTAHAEIKALRNGAKFL 67

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L    LYVTLEPC MC  AI  +RI RL +GA              + +       
Sbjct: 68  KNYRLLHTTLYVTLEPCIMCYGAIIHSRISRLVFGAKYKNLQKYICCKNHFFINKNFRKI 127

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
            I   + E     ++  FFK +R
Sbjct: 128 SITQEVLESECSNLLSSFFKRKR 150


>gi|302872756|ref|YP_003841392.1| CMP/dCMP deaminase zinc-binding [Caldicellulosiruptor obsidiansis
           OB47]
 gi|302575615|gb|ADL43406.1| CMP/dCMP deaminase zinc-binding [Caldicellulosiruptor obsidiansis
           OB47]
          Length = 143

 Score = 88.6 bits (218), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 51/134 (38%), Positives = 75/134 (55%), Gaps = 3/134 (2%)

Query: 16  QNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVD 75
           + A+  N+IPV A  V + KIIS   N +   K    HAEILAI      LS + L   +
Sbjct: 12  EYASHSNDIPVAAAVVKDGKIISIKRNDS---KKAIYHAEILAIIDATSKLSTKDLRSCE 68

Query: 76  LYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQ 135
           ++VT EPC MC +AI L++++RLY+GA + K G  E+          +H  E+  GI E 
Sbjct: 69  MFVTKEPCPMCMSAIVLSKVKRLYFGARDFKMGAAESCFNLSQNPFLNHKVEVIGGICED 128

Query: 136 RSRQIIQDFFKERR 149
             R +++ FF+E+R
Sbjct: 129 ECRLLLKRFFEEKR 142


>gi|306821661|ref|ZP_07455259.1| tRNA-specific adenosine deaminase [Eubacterium yurii subsp.
           margaretiae ATCC 43715]
 gi|304550406|gb|EFM38399.1| tRNA-specific adenosine deaminase [Eubacterium yurii subsp.
           margaretiae ATCC 43715]
          Length = 153

 Score = 88.6 bits (218), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 53/148 (35%), Positives = 76/148 (51%), Gaps = 11/148 (7%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  AL  A  A +++E+PVG V V  +++I+   N  +  K    HAEILAI    R L
Sbjct: 6   FMKKALSNAIRAYIQDEVPVGCVIVKGDEVIASTYNTKKATKSAINHAEILAIDEASRKL 65

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
            + IL + D+YVTLEPC MC  AI  +RI+++Y GA++   G       F +        
Sbjct: 66  GRFILDDCDMYVTLEPCLMCTGAILQSRIKKVYIGATDESMGA------FVSKIALVKDE 119

Query: 127 EIYP-----GISEQRSRQIIQDFFKERR 149
            IYP        +  S  I+  FF++ R
Sbjct: 120 MIYPQKIDYAFKKTISGYILSRFFRKIR 147


>gi|300790762|ref|YP_003771053.1| cytidine and deoxycytidylate deaminase family protein
           [Amycolatopsis mediterranei U32]
 gi|299800276|gb|ADJ50651.1| cytidine and deoxycytidylate deaminase family protein
           [Amycolatopsis mediterranei U32]
          Length = 142

 Score = 88.6 bits (218), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 55/144 (38%), Positives = 79/144 (54%), Gaps = 4/144 (2%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKI-ISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  ALE A+  A   ++P+GAV    + + ++ A N   EL D TAHAEILA+R   +++
Sbjct: 1   MEAALEAAR--APGADVPIGAVVFGPDGVPLAAARNARIELGDPTAHAEILALRAAAQVV 58

Query: 67  SQEI-LPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
                L    L VTLEPCTMCA A+ LARI RL +GA  PK G + +          +H 
Sbjct: 59  GDGWRLEGCTLAVTLEPCTMCAGALVLARIARLVFGAWEPKTGAVGSLWDVVRDRRLNHR 118

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
           PE++ G+       +++ +F  RR
Sbjct: 119 PEVHGGVLLDECAGLLETYFAMRR 142


>gi|238061540|ref|ZP_04606249.1| CMP/dCMP deaminase [Micromonospora sp. ATCC 39149]
 gi|237883351|gb|EEP72179.1| CMP/dCMP deaminase [Micromonospora sp. ATCC 39149]
          Length = 172

 Score = 88.6 bits (218), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 50/126 (39%), Positives = 70/126 (55%), Gaps = 1/126 (0%)

Query: 22  NEIPVGAVAVLNNKIISRAGNRNRELK-DVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80
           +++PVGAV    +     +G   REL  D TAHAE+LA+R     L +  L +  L VTL
Sbjct: 47  DDVPVGAVIYGPDGTELASGRNERELTGDPTAHAEVLALRRAAERLGRWRLDDCTLVVTL 106

Query: 81  EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140
           EPCTMCA AI LARI  + +GA  PK G   +          +H PE+Y G+ E  +  +
Sbjct: 107 EPCTMCAGAIVLARIATVVFGAWEPKTGAAGSLWDVLRDRRLNHRPEVYGGLLEAENSAV 166

Query: 141 IQDFFK 146
           ++ FF+
Sbjct: 167 LRAFFR 172


>gi|312792797|ref|YP_004025720.1| cmp/dcmp deaminase zinc-binding protein [Caldicellulosiruptor
           kristjanssonii 177R1B]
 gi|312878594|ref|ZP_07738458.1| CMP/dCMP deaminase zinc-binding [Caldicellulosiruptor lactoaceticus
           6A]
 gi|311794629|gb|EFR11094.1| CMP/dCMP deaminase zinc-binding [Caldicellulosiruptor lactoaceticus
           6A]
 gi|312179937|gb|ADQ40107.1| CMP/dCMP deaminase zinc-binding protein [Caldicellulosiruptor
           kristjanssonii 177R1B]
          Length = 143

 Score = 88.6 bits (218), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 50/134 (37%), Positives = 75/134 (55%), Gaps = 3/134 (2%)

Query: 16  QNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVD 75
           + A+  N+IPV A  V + KI+S   N +   K    HAEILAI      LS + L   +
Sbjct: 12  EYASRSNDIPVAAAVVKDGKIVSIKRNDS---KKAIYHAEILAIIDATSKLSTKDLRSCE 68

Query: 76  LYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQ 135
           ++VT EPC MC +AI L++++RLY+GA + K G  E+          +H  E+  GI E 
Sbjct: 69  MFVTKEPCPMCMSAIVLSKVKRLYFGARDFKMGAAESCFNLSQHPFLNHKVEVIGGICED 128

Query: 136 RSRQIIQDFFKERR 149
             R +++ FF+E+R
Sbjct: 129 ECRLLLKRFFEEKR 142


>gi|120598186|ref|YP_962760.1| CMP/dCMP deaminase, zinc-binding [Shewanella sp. W3-18-1]
 gi|120558279|gb|ABM24206.1| tRNA-adenosine deaminase [Shewanella sp. W3-18-1]
          Length = 164

 Score = 88.6 bits (218), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 50/143 (34%), Positives = 73/143 (51%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  A++ A+ A    E+PVGAV V + + I+   N +    D +AHAEIL +R   + L
Sbjct: 5   WMQVAMQMAEKAEAAGEVPVGAVLVKDGQQIATGYNLSISQHDPSAHAEILCLRSAGKKL 64

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  LY+TLEPC MCA A+  +RI R+ YGA + K G              +H  
Sbjct: 65  ENYRLLDATLYITLEPCAMCAGAMVHSRIARVVYGARDEKTGAAGTVVNLLQHPAFNHQV 124

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+  G+  +     +  FFK RR
Sbjct: 125 EVTSGVLAEACSAQLSRFFKRRR 147


>gi|319427113|gb|ADV55187.1| CMP/dCMP deaminase zinc-binding protein [Shewanella putrefaciens
           200]
          Length = 169

 Score = 88.2 bits (217), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 50/143 (34%), Positives = 73/143 (51%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  A++ A+ A    E+PVGAV V + + I+   N +    D +AHAEIL +R   + L
Sbjct: 10  WMQVAMQMAEKAEAAGEVPVGAVLVKDGQQIATGYNLSISQHDPSAHAEILCLRSAGKKL 69

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  LY+TLEPC MCA A+  +RI R+ YGA + K G              +H  
Sbjct: 70  ENYRLLDATLYITLEPCAMCAGAMVHSRIARVVYGARDEKTGAAGTVVNLLQHPAFNHQV 129

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+  G+  +     +  FFK RR
Sbjct: 130 EVTSGVLAEACSAQLSRFFKRRR 152


>gi|319943546|ref|ZP_08017828.1| tRNA-specific adenosine deaminase [Lautropia mirabilis ATCC 51599]
 gi|319743361|gb|EFV95766.1| tRNA-specific adenosine deaminase [Lautropia mirabilis ATCC 51599]
          Length = 206

 Score = 88.2 bits (217), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 51/141 (36%), Positives = 71/141 (50%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           +  M  A+++A NA L  E+PVGAV V   ++I+   N      D TAHAEI  +RM   
Sbjct: 22  HAMMRLAMDQALNAQLHGEVPVGAVLVKAGQVIATGYNHPIGSHDPTAHAEIRTLRMAAE 81

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
            L    + E  LYVTLEPC MC  A+  ARI R+ +GA +PK G              +H
Sbjct: 82  QLGNYRVGESTLYVTLEPCMMCLGAMLHARISRVVFGAPDPKTGVCGGVLDLPAEGRLNH 141

Query: 125 SPEIYPGISEQRSRQIIQDFF 145
              +  G+      +++Q FF
Sbjct: 142 QTVVQGGLLADECGKLLQRFF 162


>gi|325846128|ref|ZP_08169222.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Anaerococcus hydrogenalis ACS-025-V-Sch4]
 gi|325481721|gb|EGC84756.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Anaerococcus hydrogenalis ACS-025-V-Sch4]
          Length = 185

 Score = 88.2 bits (217), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 51/139 (36%), Positives = 76/139 (54%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  A+ EA+ A L  E+P+G V V N KII+R+ N   + K    HAEILAI    + +
Sbjct: 6   YMKEAINEAKLARLEEEVPIGCVIVKNGKIIARSHNYTYKGKSALKHAEILAIDKASKYV 65

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  +YVT+EPC+MCA AI  +RI RL    ++ K G   + T      +  H  
Sbjct: 66  GDFRLEDCTMYVTMEPCSMCAGAIINSRIDRLVIALADVKRGACGSNTNITGDRSQLHFL 125

Query: 127 EIYPGISEQRSRQIIQDFF 145
           +   G+ + +S +I+Q FF
Sbjct: 126 DAEFGLMKDQSLEILQSFF 144


>gi|291542828|emb|CBL15938.1| tRNA-adenosine deaminase [Ruminococcus bromii L2-63]
          Length = 152

 Score = 88.2 bits (217), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 48/126 (38%), Positives = 70/126 (55%), Gaps = 1/126 (0%)

Query: 24  IPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83
           +PVGAV V N++I++   NR  + K+   HAE  AI   C+ L    L   ++YVTLEPC
Sbjct: 24  VPVGAVIVRNDEIVATGRNRREQGKNALLHAETDAIYNACQKLGGWRLWNCEIYVTLEPC 83

Query: 84  TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQD 143
            MCA AI  A I ++Y+GA + K G     T  + +   +  PE   GI ++   +++ D
Sbjct: 84  PMCAGAIINAHIPKVYFGAYDLKNGACGTITNLFQMPF-NFKPESVGGIMQEECSKLLTD 142

Query: 144 FFKERR 149
           FFK  R
Sbjct: 143 FFKNLR 148


>gi|312877655|ref|ZP_07737611.1| CMP/dCMP deaminase zinc-binding [Caldicellulosiruptor lactoaceticus
           6A]
 gi|311795548|gb|EFR11921.1| CMP/dCMP deaminase zinc-binding [Caldicellulosiruptor lactoaceticus
           6A]
          Length = 175

 Score = 88.2 bits (217), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 50/132 (37%), Positives = 74/132 (56%), Gaps = 3/132 (2%)

Query: 18  AALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLY 77
           A+  N+IPV A  V + +IIS   N +   K    HAEILAI      LS + L   +++
Sbjct: 46  ASRSNDIPVAAAVVKDGRIISIKRNDS---KKAIYHAEILAIIDATSKLSTKDLRSCEMF 102

Query: 78  VTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRS 137
           VT EPC MC +AI L++++RLY+GA + K G  E+          +H  E+  GI E   
Sbjct: 103 VTKEPCPMCMSAIVLSKVKRLYFGARDFKMGAAESCFNLSQHPFLNHKVEVIGGICEDEC 162

Query: 138 RQIIQDFFKERR 149
           R +++ FF+E+R
Sbjct: 163 RLLLKRFFEEKR 174


>gi|307729964|ref|YP_003907188.1| CMP/dCMP deaminase zinc-binding protein [Burkholderia sp. CCGE1003]
 gi|307584499|gb|ADN57897.1| CMP/dCMP deaminase zinc-binding protein [Burkholderia sp. CCGE1003]
          Length = 350

 Score = 88.2 bits (217), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 51/139 (36%), Positives = 77/139 (55%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM+ A   A+ A    E+PVGAV V  +++I++  N      D +AHAE++A+R   +++
Sbjct: 184 FMALAQAAAEEARAAGEVPVGAVLVRGDEVIAKGFNHPISAHDPSAHAEMVALRAAAQVV 243

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               LP  +LYVTLEPC MCA AI  ARI R+ +GA +PK G   +    +     +H  
Sbjct: 244 ENYRLPGCELYVTLEPCLMCAGAIMHARIARVVFGARDPKTGACGSVVDAFANPQLNHHT 303

Query: 127 EIYPGISEQRSRQIIQDFF 145
           E+  G+ E      ++ FF
Sbjct: 304 EVTGGVLENECGAALKSFF 322


>gi|94986787|ref|YP_594720.1| cytosine/adenosine deaminases [Lawsonia intracellularis PHE/MN1-00]
 gi|94731036|emb|CAJ54399.1| Cytosine/adenosine deaminases [Lawsonia intracellularis PHE/MN1-00]
          Length = 162

 Score = 88.2 bits (217), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 55/144 (38%), Positives = 73/144 (50%), Gaps = 1/144 (0%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
            M  AL EA     +NE+PVGA+ V  N KII +  N      D TAHAEILA+R    +
Sbjct: 18  LMDEALIEANQCTKKNEVPVGAIIVHKNGKIIGKGHNAPITTSDPTAHAEILALRTAGAV 77

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
                L +  L VTLEPC MC  AI  ARI  + YGA+    G I +    + L   ++ 
Sbjct: 78  QQNYRLQDCFLIVTLEPCLMCVGAIIQARIDGIVYGAAELNTGSITSCIAGFDLPFNNYK 137

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
           P    GI   +  Q++ +FF + R
Sbjct: 138 PWHMGGIKATQCSQLLHNFFYKLR 161


>gi|297572271|ref|YP_003698045.1| CMP/dCMP deaminase zinc-binding protein [Arcanobacterium
           haemolyticum DSM 20595]
 gi|296932618|gb|ADH93426.1| CMP/dCMP deaminase zinc-binding protein [Arcanobacterium
           haemolyticum DSM 20595]
          Length = 143

 Score = 88.2 bits (217), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 52/143 (36%), Positives = 75/143 (52%), Gaps = 1/143 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  A+E A+ A    ++PVGAV +  +  +I R  N      D   HAE+ A+R   R L
Sbjct: 1   MHEAMEIARRAGADGDVPVGAVILGPDGGVIGRGWNTREADADPCGHAEVNALREAARAL 60

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
            +  L    L VTLEPCTMCA AI  +R+ R+ +GA + K G   +       A  +H  
Sbjct: 61  GRWNLSGCTLVVTLEPCTMCAGAIVNSRVSRVVFGAWDAKAGAAGSVRDVLRDARLNHVV 120

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+  G+ E  +  I+QD+F+ RR
Sbjct: 121 EVIGGLCEAENVAILQDWFEARR 143


>gi|257066772|ref|YP_003153028.1| CMP/dCMP deaminase zinc-binding [Anaerococcus prevotii DSM 20548]
 gi|256798652|gb|ACV29307.1| CMP/dCMP deaminase zinc-binding [Anaerococcus prevotii DSM 20548]
          Length = 180

 Score = 88.2 bits (217), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 54/148 (36%), Positives = 77/148 (52%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           K+   FM+ A+ EA+ A    E+PVGAV V + KII R  N   + K    HAE++AI+ 
Sbjct: 24  KEDYFFMAEAINEARVARFIEEVPVGAVVVYDGKIIGRGHNLTYKGKSALKHAELMAIKE 83

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
               +    L E  +YVT+EPC+MCA AI  +RI RL  G  + K G   + T      +
Sbjct: 84  ASSWMDDFRLEECTMYVTMEPCSMCAGAIINSRIDRLVVGIRDHKRGACGSNTNVCGDRS 143

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
             H  +   G+ E+ +   IQ FF+  R
Sbjct: 144 QLHFVDAEFGLMEEEALFEIQTFFRYLR 171


>gi|296392969|ref|YP_003657853.1| CMP/dCMP deaminase zinc-binding protein [Segniliparus rotundus DSM
           44985]
 gi|296180116|gb|ADG97022.1| CMP/dCMP deaminase zinc-binding protein [Segniliparus rotundus DSM
           44985]
          Length = 180

 Score = 88.2 bits (217), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 51/129 (39%), Positives = 70/129 (54%), Gaps = 2/129 (1%)

Query: 23  EIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEI-LPEVDLYVTL 80
           ++PVGAV    + K ++RA N      D TAHAEILA+R    IL     L    L VTL
Sbjct: 37  DVPVGAVVFGPDGKELARAANAREAFGDPTAHAEILALRQAAAILGDGWRLIGCTLAVTL 96

Query: 81  EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140
           EPCTMCA A   ARI R+ +GA  PK G + +     T    +H P++  G+ E    ++
Sbjct: 97  EPCTMCAGAAVNARIARIVFGAREPKTGAVGSLWDVVTDPRLNHRPQVRSGVLEAECAEL 156

Query: 141 IQDFFKERR 149
            + FF++ R
Sbjct: 157 TRSFFRKLR 165


>gi|284989070|ref|YP_003407624.1| CMP/dCMP deaminase protein [Geodermatophilus obscurus DSM 43160]
 gi|284062315|gb|ADB73253.1| CMP/dCMP deaminase zinc-binding protein [Geodermatophilus obscurus
           DSM 43160]
          Length = 154

 Score = 88.2 bits (217), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 46/130 (35%), Positives = 71/130 (54%), Gaps = 2/130 (1%)

Query: 22  NEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEI-LPEVDLYVT 79
            + P+GAV +  +  +++ A N   +  D TAHAE+LA+R   R+      L    L VT
Sbjct: 23  GDTPIGAVVLGPDGTVLAEAANEREKQGDPTAHAEVLALRAAARVHGDGWRLTGTTLVVT 82

Query: 80  LEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139
           LEPCTMCA A  LAR+ R+ YGA +PK G   +          +H P++  G+  + S  
Sbjct: 83  LEPCTMCAGASVLARVDRIVYGADDPKAGAAGSLWDVVRDRRLNHRPQVTGGVRAEESAT 142

Query: 140 IIQDFFKERR 149
           +++ FF+ +R
Sbjct: 143 LLRAFFRRQR 152


>gi|254822445|ref|ZP_05227446.1| hypothetical protein MintA_21101 [Mycobacterium intracellulare ATCC
           13950]
          Length = 152

 Score = 87.8 bits (216), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 54/145 (37%), Positives = 76/145 (52%), Gaps = 3/145 (2%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
            +  AL  A  A  R+ +P+GAV +  +   ++RA N    L D TAHAEILA+R    +
Sbjct: 7   LIRSALSVAATAGPRD-VPIGAVVISADGTELARAVNAREALGDPTAHAEILALRAAAEV 65

Query: 66  LSQEI-LPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
           L     L    L VT+EPCTMCA A+ L+RI RL +GA  PK G + +          +H
Sbjct: 66  LGDGWRLEGATLAVTVEPCTMCAGALVLSRIGRLVFGAWEPKTGAVGSLWDVVRDRRLNH 125

Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149
            PE+  G+  Q     ++ FF  +R
Sbjct: 126 RPEVRGGVLAQECAAPLEAFFARQR 150


>gi|296271485|ref|YP_003654117.1| CMP/dCMP deaminase zinc-binding protein [Thermobispora bispora DSM
           43833]
 gi|296094272|gb|ADG90224.1| CMP/dCMP deaminase zinc-binding protein [Thermobispora bispora DSM
           43833]
          Length = 152

 Score = 87.8 bits (216), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 57/143 (39%), Positives = 77/143 (53%), Gaps = 1/143 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  AL EA  A  R E+PVGAV +  +  +++ AGN      D TAHAE+LA+R   R L
Sbjct: 9   MRLALAEAVRAGERGEVPVGAVVLGPDGTVLAAAGNDREASGDPTAHAEVLALRAAARAL 68

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L    L VTLEPCTMCA A  LAR+ R+ YGA++ K G   +          +H P
Sbjct: 69  GTWRLSGCTLVVTLEPCTMCAGAAVLARVDRVVYGAADEKAGAAGSLWDVLRDRRLNHRP 128

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+  G+  +    +++ FF  RR
Sbjct: 129 EVVLGVLAEECGAVLRSFFAGRR 151


>gi|229816552|ref|ZP_04446851.1| hypothetical protein COLINT_03609 [Collinsella intestinalis DSM
           13280]
 gi|229807887|gb|EEP43690.1| hypothetical protein COLINT_03609 [Collinsella intestinalis DSM
           13280]
          Length = 632

 Score = 87.8 bits (216), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 57/143 (39%), Positives = 77/143 (53%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  AL EA+ AA   E+P+GAV V    II+RA NR    +D +AHAE LA+    R L
Sbjct: 20  FMREALAEARAAAEVGEVPIGAVVVHKGTIIARAHNRRELDEDPSAHAEFLAMMQAARTL 79

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
            +  L    +YVTLEPC MC+  +  ARI R  YGA++PKGG +            +H+ 
Sbjct: 80  GRWRLSGCTVYVTLEPCLMCSGLMVNARIDRCVYGATDPKGGALGTLYDVSADPRLNHAF 139

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
            +  GI E      ++ FF+  R
Sbjct: 140 PVVSGILEDECAAELRSFFRRLR 162


>gi|317507917|ref|ZP_07965613.1| cytidine and deoxycytidylate deaminase zinc-binding protein
           [Segniliparus rugosus ATCC BAA-974]
 gi|316253782|gb|EFV13156.1| cytidine and deoxycytidylate deaminase zinc-binding protein
           [Segniliparus rugosus ATCC BAA-974]
          Length = 166

 Score = 87.8 bits (216), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 51/129 (39%), Positives = 70/129 (54%), Gaps = 2/129 (1%)

Query: 23  EIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEI-LPEVDLYVTL 80
           ++PVGAV    +   ++RA N    L D TAHAEILA+R    +L     L    L VTL
Sbjct: 28  DVPVGAVVFGPDGAELARAANAREALGDPTAHAEILALRQAAAVLGDGWRLVGCTLAVTL 87

Query: 81  EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140
           EPCTMCA A   ARI R+ +GA  PK G + +     T    +H P + PG+ E    ++
Sbjct: 88  EPCTMCAGAAVNARIGRIVFGAREPKTGAVGSLWDVVTDPRLNHRPLVRPGVLEPECAEL 147

Query: 141 IQDFFKERR 149
            + FF++ R
Sbjct: 148 TRSFFRKLR 156


>gi|312137792|ref|YP_004005128.1| cmp/dcmp deaminase [Rhodococcus equi 103S]
 gi|325676107|ref|ZP_08155789.1| cytidine and deoxycytidylate deaminase [Rhodococcus equi ATCC
           33707]
 gi|311887131|emb|CBH46440.1| CMP/dCMP deaminase [Rhodococcus equi 103S]
 gi|325553147|gb|EGD22827.1| cytidine and deoxycytidylate deaminase [Rhodococcus equi ATCC
           33707]
          Length = 152

 Score = 87.8 bits (216), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 49/129 (37%), Positives = 70/129 (54%), Gaps = 2/129 (1%)

Query: 23  EIPVGAVAVLNNKI-ISRAGNRNRELKDVTAHAEILAIRMGCRILSQEI-LPEVDLYVTL 80
           ++PVGAV    + + ++RA N      D TAHAEILA+R   R+      L    L VTL
Sbjct: 24  DVPVGAVVFDADGVELARAANAREATGDPTAHAEILALRAAARVHGDGWRLEGATLAVTL 83

Query: 81  EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140
           EPCTMCA A+ LAR+ R+ +GA  PK G + +           H P++  G+ E     I
Sbjct: 84  EPCTMCAGALVLARVERVVFGAWEPKTGAVGSLWDVVRDRRLTHRPQVRGGVLEGECAGI 143

Query: 141 IQDFFKERR 149
           ++ FF+ +R
Sbjct: 144 LESFFQGQR 152


>gi|296160206|ref|ZP_06843025.1| CMP/dCMP deaminase zinc-binding [Burkholderia sp. Ch1-1]
 gi|295889680|gb|EFG69479.1| CMP/dCMP deaminase zinc-binding [Burkholderia sp. Ch1-1]
          Length = 238

 Score = 87.8 bits (216), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 45/124 (36%), Positives = 68/124 (54%)

Query: 22  NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81
            E+PVGAV V  +++I++  N      D +AHAE++A+R   + +    LP  +LYVTLE
Sbjct: 87  GEVPVGAVLVRGDEVIAKGFNHPIGAHDPSAHAEMVALRAAAQAVENYRLPGCELYVTLE 146

Query: 82  PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141
           PC MCA AI  ARI R+ +GA +PK G   +    +     +H   +  G+ E      +
Sbjct: 147 PCLMCAGAIMHARIARVVFGARDPKTGACGSVVDAFANPQLNHHTSVTGGVLESECGAAL 206

Query: 142 QDFF 145
           + FF
Sbjct: 207 KSFF 210


>gi|269792349|ref|YP_003317253.1| CMP/dCMP deaminase zinc-binding protein [Thermanaerovibrio
           acidaminovorans DSM 6589]
 gi|269099984|gb|ACZ18971.1| CMP/dCMP deaminase zinc-binding protein [Thermanaerovibrio
           acidaminovorans DSM 6589]
          Length = 153

 Score = 87.8 bits (216), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 52/146 (35%), Positives = 73/146 (50%), Gaps = 6/146 (4%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  AL EA+ A    ++PVGAV V+N  ++ R  N      D   HAE++AIR  C  L
Sbjct: 3   FMREALREAELAMEAGDVPVGAVVVMNGLVVGRGRNVRELTGDPLGHAEMVAIRDACSAL 62

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L    LYVTLEPC MCA AI   RI  +++   +PK G + +    Y +      P
Sbjct: 63  GTWRLDGASLYVTLEPCVMCAGAILQCRISEVHFALRDPKAGAVGS---LYDVLRDPRQP 119

Query: 127 ---EIYPGISEQRSRQIIQDFFKERR 149
               ++ G    RS  +++ FF+  R
Sbjct: 120 FRCRVHQGEMRDRSAALLRGFFEGLR 145


>gi|262200337|ref|YP_003271545.1| CMP/dCMP deaminase zinc-binding protein [Gordonia bronchialis DSM
           43247]
 gi|262083684|gb|ACY19652.1| CMP/dCMP deaminase zinc-binding protein [Gordonia bronchialis DSM
           43247]
          Length = 143

 Score = 87.4 bits (215), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 53/128 (41%), Positives = 72/128 (56%), Gaps = 2/128 (1%)

Query: 24  IPVGAVAVLNNKI-ISRAGNRNRELKDVTAHAEILAIRMGCRILSQEI-LPEVDLYVTLE 81
           +P+GAV      I ++RA NR     D TAHAEILA+R           LP   + VT+E
Sbjct: 16  VPIGAVVFDPGGIELARAANRREADADPTAHAEILALRAAAAAFGDGWRLPGCTIAVTVE 75

Query: 82  PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141
           PCTMCA AI+LARI  L +GA  PK G + +           H P++  GI E R R+++
Sbjct: 76  PCTMCAGAITLARIDTLLFGAWEPKTGAVGSLWDVVRDPRLTHRPQVRGGIFEDRCRELM 135

Query: 142 QDFFKERR 149
            DFF+++R
Sbjct: 136 IDFFQQQR 143


>gi|222530354|ref|YP_002574236.1| CMP/dCMP deaminase zinc-binding [Caldicellulosiruptor bescii DSM
           6725]
 gi|222457201|gb|ACM61463.1| CMP/dCMP deaminase zinc-binding [Caldicellulosiruptor bescii DSM
           6725]
          Length = 143

 Score = 87.4 bits (215), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 50/134 (37%), Positives = 75/134 (55%), Gaps = 3/134 (2%)

Query: 16  QNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVD 75
           + A+  N+IPV A  V + +IIS   N   + K    HAEILAI      LS + L   +
Sbjct: 12  EYASRSNDIPVAAAVVKDRRIISIKRN---DSKKAIYHAEILAIIDATSKLSTKDLRSCE 68

Query: 76  LYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQ 135
           ++VT EPC MC +AI L++++RLY+GA + K G  E+          +H  E+  GI E 
Sbjct: 69  MFVTKEPCPMCMSAIVLSKVKRLYFGARDFKMGAAESCFNLSQNPFLNHKVEVIGGICED 128

Query: 136 RSRQIIQDFFKERR 149
             R +++ FF+E+R
Sbjct: 129 ECRLLLKRFFEEKR 142


>gi|220910074|ref|YP_002485385.1| CMP/dCMP deaminase [Cyanothece sp. PCC 7425]
 gi|219866685|gb|ACL47024.1| CMP/dCMP deaminase zinc-binding [Cyanothece sp. PCC 7425]
          Length = 174

 Score = 87.4 bits (215), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 55/144 (38%), Positives = 69/144 (47%), Gaps = 1/144 (0%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           +M  A+  A+ A    E+PVGA+ V    +++    NR     D TAHAEILA+R   + 
Sbjct: 13  WMEQAIALAEQAGAAGEVPVGAIVVSPQGELLGTGENRRERDGDPTAHAEILALRAAGQK 72

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           L    L    LYV LEPC MCA AI  ARI  L YGA + K G I             H 
Sbjct: 73  LQTWYLKNCTLYVNLEPCPMCAGAILQARIGLLVYGADDAKTGAIRTVLNLPDSRCSFHR 132

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
                GI E   RQ +Q +F  +R
Sbjct: 133 LTTLGGILETTCRQQLQTWFARKR 156


>gi|159035903|ref|YP_001535156.1| CMP/dCMP deaminase zinc-binding [Salinispora arenicola CNS-205]
 gi|157914738|gb|ABV96165.1| CMP/dCMP deaminase zinc-binding [Salinispora arenicola CNS-205]
          Length = 165

 Score = 87.4 bits (215), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 54/151 (35%), Positives = 79/151 (52%), Gaps = 6/151 (3%)

Query: 2   KKGNVFMSCALEEAQNAA-----LRNEIPVGAVAVLNNKIISRAGNRNRELK-DVTAHAE 55
           ++  ++M  ALE A   A     + ++IPVGAV +  +      G   REL  D TAHAE
Sbjct: 15  QRHELWMRRALEVAVTGADPTVTVVDDIPVGAVLLGPDGTELATGRNERELTGDPTAHAE 74

Query: 56  ILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
           +LA+R     L +  L    L VTLEPCTMCA A+ LAR+  + +GA  PK G   +   
Sbjct: 75  VLALRRAAGRLGRWRLDGCTLVVTLEPCTMCAGALVLARVSTVVFGAWEPKTGAAGSLWD 134

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
                  +H PE+Y G+    +  +++ FF+
Sbjct: 135 VLRDRRLNHRPEVYGGVLATETAAVLRAFFR 165


>gi|239980910|ref|ZP_04703434.1| cytidine/deoxycytidine deaminase [Streptomyces albus J1074]
          Length = 168

 Score = 87.4 bits (215), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 52/142 (36%), Positives = 74/142 (52%), Gaps = 1/142 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  AL EAQ A    ++PVGAV +  + +++S A N      D TAHAEILA+R      
Sbjct: 27  MRQALAEAQRAGRGGDVPVGAVVLDPDGRLLSAAHNEREADGDPTAHAEILALRRAAARS 86

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
            +  L +  L VTLEPCTMCA A   +R+ R+ YGA + K G   +          +H P
Sbjct: 87  GRWRLTDCTLVVTLEPCTMCAGAAVQSRVDRVVYGARDEKAGAAGSLWDVVRDRRLNHRP 146

Query: 127 EIYPGISEQRSRQIIQDFFKER 148
           E+  G+       ++ +FF+ R
Sbjct: 147 EVIEGVLAADCAALLTEFFRAR 168


>gi|257057632|ref|YP_003135464.1| tRNA-adenosine deaminase [Saccharomonospora viridis DSM 43017]
 gi|256587504|gb|ACU98637.1| tRNA-adenosine deaminase [Saccharomonospora viridis DSM 43017]
          Length = 147

 Score = 87.4 bits (215), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 50/141 (35%), Positives = 77/141 (54%), Gaps = 2/141 (1%)

Query: 11  ALEEAQNAALRNEIPVGA-VAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQE 69
           AL  A+ A    ++P+GA V   + ++++ A N    L D TAHAE+LA+R   R+    
Sbjct: 7   ALGFAERAVGTADVPIGAAVFSPDGRLLAGAHNARERLGDPTAHAEVLALREAARVHGDG 66

Query: 70  I-LPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEI 128
             L    L VT+EPCTMCA A+ LAR+ R+ +GA  P+ G + +          +H PE+
Sbjct: 67  WRLEGCTLAVTVEPCTMCAGALVLARVARVVFGAWEPRTGAVCSLWDVVRDRRLNHRPEV 126

Query: 129 YPGISEQRSRQIIQDFFKERR 149
             G+ E     ++ DFF ++R
Sbjct: 127 VGGVLESECAALLNDFFADQR 147


>gi|116669211|ref|YP_830144.1| tRNA-adenosine deaminase [Arthrobacter sp. FB24]
 gi|116609320|gb|ABK02044.1| tRNA-adenosine deaminase [Arthrobacter sp. FB24]
          Length = 167

 Score = 87.4 bits (215), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 55/152 (36%), Positives = 78/152 (51%), Gaps = 11/152 (7%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELK-DVTAHAEILAIRMGCRI 65
           +M  AL EA+ A    ++P+GA+ +  +  I   G   RE   D TAHAE++AIR     
Sbjct: 11  WMGLALAEARRALGTGDVPIGAIVIGPDGDILGTGRNEREAHGDPTAHAEMVAIREAAAR 70

Query: 66  LSQEILPEVD--------LYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFY 117
           L    LP+ D        L VTLEPC MCA A+ LARI R+ +GA + K G   +     
Sbjct: 71  LQS--LPQGDGWRLAECTLVVTLEPCAMCAGAVVLARIPRVVFGAWDEKAGAAGSVFDIL 128

Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
                +H  E+Y G+ EQ    ++++FF   R
Sbjct: 129 RERRLNHWVEVYAGVREQECADLLREFFAGHR 160


>gi|88703683|ref|ZP_01101399.1| Cytidine and deoxycytidylate deaminase [Congregibacter litoralis
           KT71]
 gi|88702397|gb|EAQ99500.1| Cytidine and deoxycytidylate deaminase [Congregibacter litoralis
           KT71]
          Length = 167

 Score = 87.4 bits (215), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 54/149 (36%), Positives = 75/149 (50%), Gaps = 11/149 (7%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM+ AL+ A+ AA   E+PVGA+ V + +I+    N      D TAHAEI A+R     L
Sbjct: 24  FMARALQLAKEAAEAGEVPVGALVVQDGRILGEGRNAQIGATDPTAHAEINALRAAASAL 83

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIE------NGTQFYTLA 120
               +P   LYVTLEPC+MC  A+  ARI  L + A  P+ G +       N + F    
Sbjct: 84  DNYRMPGATLYVTLEPCSMCCGALVHARIGSLVFAAREPRAGAVVSTRNLLNESAFNHRV 143

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
           +     E  P      S  +++ FF+ERR
Sbjct: 144 SWREDAENAPA-----SAALLRAFFRERR 167


>gi|291452772|ref|ZP_06592162.1| deaminase [Streptomyces albus J1074]
 gi|291355721|gb|EFE82623.1| deaminase [Streptomyces albus J1074]
          Length = 142

 Score = 87.4 bits (215), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 52/142 (36%), Positives = 74/142 (52%), Gaps = 1/142 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  AL EAQ A    ++PVGAV +  + +++S A N      D TAHAEILA+R      
Sbjct: 1   MRQALAEAQRAGRGGDVPVGAVVLDPDGRLLSAAHNEREADGDPTAHAEILALRRAAARS 60

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
            +  L +  L VTLEPCTMCA A   +R+ R+ YGA + K G   +          +H P
Sbjct: 61  GRWRLTDCTLVVTLEPCTMCAGAAVQSRVDRVVYGARDEKAGAAGSLWDVVRDRRLNHRP 120

Query: 127 EIYPGISEQRSRQIIQDFFKER 148
           E+  G+       ++ +FF+ R
Sbjct: 121 EVIEGVLAADCAALLTEFFRAR 142


>gi|332140490|ref|YP_004426228.1| cytidine/deoxycytidylate deaminase family protein [Alteromonas
           macleodii str. 'Deep ecotype']
 gi|327550512|gb|AEA97230.1| cytidine/deoxycytidylate deaminase family protein [Alteromonas
           macleodii str. 'Deep ecotype']
          Length = 223

 Score = 87.4 bits (215), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 48/143 (33%), Positives = 73/143 (51%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  AL  A +A    E+PVGA  VLN ++I    N      D +AHAE+ A++     +
Sbjct: 62  WMKHALALADSAESIGEVPVGACVVLNGELIGEGYNTPISDHDPSAHAELRAVKQAASKV 121

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  LYVTLEPC+MCA  +  AR++R+ +GA + K G   +          +H  
Sbjct: 122 QNYRLIDATLYVTLEPCSMCAGMLVHARVKRVVFGAKDAKTGAAGSVMNLLQHPALNHQV 181

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           +I  G+        + DFF++RR
Sbjct: 182 DIVSGVLASTCANKLSDFFRKRR 204


>gi|317403100|gb|EFV83631.1| zinc-binding hydrolase [Achromobacter xylosoxidans C54]
          Length = 163

 Score = 87.4 bits (215), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 50/127 (39%), Positives = 71/127 (55%), Gaps = 1/127 (0%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           FM+ AL+EA+ A    E+PVGA+ V     I+ R  NR     D TAHAEI+A+R   R 
Sbjct: 14  FMTLALDEARAAYDIGEVPVGALVVSAQGDILGRGYNRTIIDHDPTAHAEIVALRGAARA 73

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           L    LP + +YVTLEPC MC  A+  AR+ R+ +GA +PK G   +     ++   +H 
Sbjct: 74  LENYRLPGITVYVTLEPCVMCIGAMLHARLARVVFGAYDPKTGACGSVLDVGSVPRLNHH 133

Query: 126 PEIYPGI 132
             +  G+
Sbjct: 134 TSVTGGV 140


>gi|253580414|ref|ZP_04857679.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
 gi|251848144|gb|EES76109.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
          Length = 181

 Score = 87.0 bits (214), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 48/143 (33%), Positives = 74/143 (51%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  A+ +A+ A    E+P+G V V   KII+R  NR    K+  +HAE+ AIR   + L
Sbjct: 16  FMKEAIRQAKKAEALEEVPIGCVIVHEGKIIARGYNRRNTDKNTLSHAELNAIRKASKKL 75

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L    +YVTLEPC MC+ A+  +RI  +  G  N K G   +      +   +H  
Sbjct: 76  GDWRLEGCTMYVTLEPCQMCSGALVQSRIDEVVIGCMNAKAGCAGSVMNLLQVDGFNHQV 135

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           +I  G+ E+    ++ +FF++ R
Sbjct: 136 KIIQGVLEEECSSMLSEFFRKLR 158


>gi|153001509|ref|YP_001367190.1| CMP/dCMP deaminase zinc-binding [Shewanella baltica OS185]
 gi|151366127|gb|ABS09127.1| CMP/dCMP deaminase zinc-binding [Shewanella baltica OS185]
          Length = 174

 Score = 87.0 bits (214), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 52/149 (34%), Positives = 73/149 (48%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           MK    +M  A+  A+ A    E+PVGAV V +   I+   N +    D +AHAEIL +R
Sbjct: 9   MKLDEHWMQVAMLMAEKAEAEGEVPVGAVLVKDGLQIATGYNLSISQHDPSAHAEILCLR 68

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              R++    L +  LYVTLEPC MCA A+  +RI R+ +GA + K G            
Sbjct: 69  EAGRLVENYRLLDATLYVTLEPCAMCAGAMVHSRIARVVFGARDEKTGAAGTVVNLLQHP 128

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  E+  G+        +  FFK RR
Sbjct: 129 AFNHQVEVTSGVLADACSAQLSRFFKRRR 157


>gi|209518682|ref|ZP_03267499.1| CMP/dCMP deaminase zinc-binding [Burkholderia sp. H160]
 gi|209500881|gb|EEA00920.1| CMP/dCMP deaminase zinc-binding [Burkholderia sp. H160]
          Length = 230

 Score = 87.0 bits (214), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 51/141 (36%), Positives = 74/141 (52%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM+ A   A+      E+PVGAV V  +++I+   N      D +AHAE++A+R   + L
Sbjct: 62  FMALAQAAAEEGRAAGEVPVGAVLVRGDEVIATGFNHPIGAHDPSAHAEMVALRAAAQSL 121

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               LP  +LYVTLEPC MCA AI  ARI R+ +GA +PK G   +    +     +H  
Sbjct: 122 ENYRLPGCELYVTLEPCLMCAGAIMHARISRVVFGARDPKTGACGSVVDAFANPQLNHHT 181

Query: 127 EIYPGISEQRSRQIIQDFFKE 147
            +  G+ E      ++ FF E
Sbjct: 182 TVSGGVLEAECSAALRSFFAE 202


>gi|328676234|gb|AEB27104.1| tRNA-specific adenosine-34 deaminase [Francisella cf. novicida Fx1]
          Length = 153

 Score = 87.0 bits (214), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 49/143 (34%), Positives = 75/143 (52%), Gaps = 1/143 (0%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  A ++A  A    E+P+GAV V +++II++  N+   L D TAHAEIL +R     L
Sbjct: 11  FMQKAYQQALLAYQAGEVPIGAVLVRDDQIIAQNFNQTIGLNDPTAHAEILVLRSAALKL 70

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L    LYVTLEPC MC   +  AR+  L Y   + + G      + +     +H+ 
Sbjct: 71  DNYRLVNTKLYVTLEPCIMCLGGLIQARVPELVYACDDSRVGAFSR-EKLHHNKNINHNL 129

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
            +  G+      ++++DFFK+RR
Sbjct: 130 GVTAGVMADECGKLLKDFFKQRR 152


>gi|157961143|ref|YP_001501177.1| zinc-binding CMP/dCMP deaminase [Shewanella pealeana ATCC 700345]
 gi|157846143|gb|ABV86642.1| CMP/dCMP deaminase zinc-binding [Shewanella pealeana ATCC 700345]
          Length = 163

 Score = 87.0 bits (214), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 48/138 (34%), Positives = 73/138 (52%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  A++ A  A  + E+PVGAV V + +++S   N +  L D +AHAE+  +R   +I+ 
Sbjct: 1   MKMAMDMAIKAEEKGEVPVGAVLVKDGEVVSAGFNFSIGLHDPSAHAEMQCLRQAGQIMQ 60

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
              L +  LYVTLEPC MCA AI  +RI RL +GA + K G           +  +H  +
Sbjct: 61  NYRLLDTTLYVTLEPCAMCAGAIVHSRINRLVFGARDEKTGAAGTVIDIVRHSAFNHQVD 120

Query: 128 IYPGISEQRSRQIIQDFF 145
           +  G+ E    + +  FF
Sbjct: 121 VSSGVLETECSEQLSAFF 138


>gi|256786485|ref|ZP_05524916.1| deaminase [Streptomyces lividans TK24]
          Length = 151

 Score = 87.0 bits (214), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 48/128 (37%), Positives = 71/128 (55%), Gaps = 2/128 (1%)

Query: 23  EIPVGAVAVL-NNKIISRAGNRNRELK-DVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80
           ++PVGAV +  + + +  AG+  RE   D TAHAE+LAIR     L +  L    L VTL
Sbjct: 24  DVPVGAVVLAPDGRTVLSAGHNEREATGDPTAHAEVLAIRRAAGELGEWRLSGCTLVVTL 83

Query: 81  EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140
           EPCTMCA A+  +R+ R+ YGA + K G   +          +H PE+  G+      ++
Sbjct: 84  EPCTMCAGALVQSRVDRVVYGARDDKAGAAGSLWDVVRDRRLNHRPEVIEGVLADDCARL 143

Query: 141 IQDFFKER 148
           + DFF++R
Sbjct: 144 LTDFFRDR 151


>gi|116070709|ref|ZP_01467978.1| cytidine/deoxycytidylate deaminase family protein [Synechococcus
           sp. BL107]
 gi|116066114|gb|EAU71871.1| cytidine/deoxycytidylate deaminase family protein [Synechococcus
           sp. BL107]
          Length = 157

 Score = 87.0 bits (214), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 48/144 (33%), Positives = 73/144 (50%), Gaps = 1/144 (0%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           +M   L+ AQ   L  E+PV AV +  + + I    NR    +D   HAE++A+R    I
Sbjct: 10  WMKVLLQRAQVNGLSGEVPVAAVVLGPDGRAIGHGRNRRETEQDPLGHAELVALRQAALI 69

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           L      +  L VTLEPC MCA A+  AR+  + +GA + K GG+       T  + HH 
Sbjct: 70  LGDWRFNQCCLIVTLEPCPMCAGALVQARMGTVVFGAHDRKRGGLGGTMNLSTHPSAHHK 129

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
             +  G+ E  +   ++ +FK+RR
Sbjct: 130 MTVIGGVMEAEASTQLEQWFKQRR 153


>gi|160876246|ref|YP_001555562.1| zinc-binding CMP/dCMP deaminase [Shewanella baltica OS195]
 gi|160861768|gb|ABX50302.1| CMP/dCMP deaminase zinc-binding [Shewanella baltica OS195]
 gi|315268435|gb|ADT95288.1| CMP/dCMP deaminase zinc-binding protein [Shewanella baltica OS678]
          Length = 175

 Score = 87.0 bits (214), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 50/143 (34%), Positives = 72/143 (50%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  A+  A+ A    E+PVGAV V + + I+   N +    D +AHAEIL +R   R++
Sbjct: 16  WMQVAMLMAEKAEAEGEVPVGAVLVKDGQQIATGYNLSISQHDPSAHAEILCLREAGRLV 75

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  LYVTLEPC MCA A+  +RI R+ +GA + K G              +H  
Sbjct: 76  ENYRLLDATLYVTLEPCAMCAGAMVHSRIARVVFGARDEKTGAAGTVVNLLQHPAFNHQV 135

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+  G+        +  FFK RR
Sbjct: 136 EVTSGVLADACSAQLSRFFKRRR 158


>gi|91783891|ref|YP_559097.1| tRNA-adenosine deaminase [Burkholderia xenovorans LB400]
 gi|91687845|gb|ABE31045.1| tRNA-adenosine deaminase [Burkholderia xenovorans LB400]
          Length = 196

 Score = 87.0 bits (214), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 45/124 (36%), Positives = 68/124 (54%)

Query: 22  NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81
            E+PVGAV V  +++I++  N      D +AHAE++A+R   + +    LP  +LYVTLE
Sbjct: 41  GEVPVGAVLVRGDEVIAKGFNHPIGAHDPSAHAEMVALRAAAQAVENYRLPGCELYVTLE 100

Query: 82  PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141
           PC MCA AI  ARI R+ +GA +PK G   +    +     +H   +  G+ E      +
Sbjct: 101 PCLMCAGAIMHARIARVVFGARDPKTGACGSVVDAFANPQLNHHTTVTGGVLESECGAAL 160

Query: 142 QDFF 145
           + FF
Sbjct: 161 KAFF 164


>gi|328950667|ref|YP_004368002.1| tRNA(Ile)-lysidine synthase [Marinithermus hydrothermalis DSM
           14884]
 gi|328450991|gb|AEB11892.1| tRNA(Ile)-lysidine synthase [Marinithermus hydrothermalis DSM
           14884]
          Length = 528

 Score = 87.0 bits (214), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 47/129 (36%), Positives = 70/129 (54%), Gaps = 7/129 (5%)

Query: 21  RNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80
           + E+P+GAV V +  +++ A N     +D TAHAE+LA+R   R + +++LP   LYVTL
Sbjct: 401 QGEVPIGAVLVRDGAVLAEAANAVEASRDATAHAELLALRTALRRVGEKVLPGATLYVTL 460

Query: 81  EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140
           EPC MC  AI  AR+ R+ YG  N K G        +T+        +  G  E    ++
Sbjct: 461 EPCPMCYGAILEARVARVVYGVENLKAGA-------FTVHGLEPRVALEAGRVEGECAKV 513

Query: 141 IQDFFKERR 149
           ++DFF   R
Sbjct: 514 LKDFFARLR 522


>gi|145298514|ref|YP_001141355.1| cytosine/adenosine deaminase [Aeromonas salmonicida subsp.
           salmonicida A449]
 gi|142851286|gb|ABO89607.1| cytosine/adenosine deaminase [Aeromonas salmonicida subsp.
           salmonicida A449]
          Length = 199

 Score = 87.0 bits (214), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 55/145 (37%), Positives = 76/145 (52%), Gaps = 4/145 (2%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  A+  A  A    EIPVGAV VL ++++   GNR+    D  AHAEI+AIR     L
Sbjct: 39  WMRHAMALAARAEGIGEIPVGAVLVLGDEVVGEGGNRSISEHDACAHAEIMAIRAAGARL 98

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  LYVTLEPC MCA A+  +R++R+ +GA + K G    G+ F  L    H+ 
Sbjct: 99  ENYRLIDTVLYVTLEPCCMCAGALIHSRVKRVVFGARDLKTGAA--GSVFDILQDPRHNH 156

Query: 127 EI--YPGISEQRSRQIIQDFFKERR 149
            +    G+        +  FFK RR
Sbjct: 157 RVSLTGGVLADACSAQLSAFFKRRR 181


>gi|328675327|gb|AEB28002.1| tRNA-specific adenosine-34 deaminase [Francisella cf. novicida
           3523]
          Length = 153

 Score = 86.7 bits (213), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 49/143 (34%), Positives = 74/143 (51%), Gaps = 1/143 (0%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  A E+A  A    E+P+GAV V +++II+   N+   L D TAHAEIL +R     +
Sbjct: 11  FMQKAYEQALLAHQAGEVPIGAVLVRDSQIIAENFNQTITLNDPTAHAEILVLRSAALEV 70

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L    LYVTLEPC MC   +  AR+  L Y   + + G      + +     +H+ 
Sbjct: 71  GNYRLINTKLYVTLEPCIMCLGGLIQARVSELVYACDDSRVGAFSR-EKLHQNKNINHNL 129

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
            +  G+      ++++DFFK+RR
Sbjct: 130 GVTAGVMADECAKLLKDFFKQRR 152


>gi|296128347|ref|YP_003635597.1| CMP/dCMP deaminase zinc-binding protein [Cellulomonas flavigena DSM
           20109]
 gi|296020162|gb|ADG73398.1| CMP/dCMP deaminase zinc-binding protein [Cellulomonas flavigena DSM
           20109]
          Length = 176

 Score = 86.7 bits (213), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 52/145 (35%), Positives = 76/145 (52%), Gaps = 5/145 (3%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  AL EA+ A    ++PVGAV +  +  ++ R  N    + D T HAE++A+R     L
Sbjct: 34  MDLALVEARAALDSGDVPVGAVVLGPDGAVVGRGRNVREAVADPTGHAEVVAMREAAATL 93

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT--CHH 124
            +  L    L VTLEPC MCA A+  AR+ RL  GA + K G    G+Q+  +      H
Sbjct: 94  GRWRLDGCTLVVTLEPCLMCAGAVLQARVPRLVLGAWDEKAGAC--GSQWDVVRDRRALH 151

Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149
             E+ PG+  + S  +++DFF   R
Sbjct: 152 RVEVVPGVRAEESATLLRDFFHPHR 176


>gi|182418731|ref|ZP_02950004.1| tRNA-specific adenosine deaminase [Clostridium butyricum 5521]
 gi|237669698|ref|ZP_04529675.1| tRNA-specific adenosine deaminase [Clostridium butyricum E4 str.
           BoNT E BL5262]
 gi|182377425|gb|EDT74981.1| tRNA-specific adenosine deaminase [Clostridium butyricum 5521]
 gi|237654772|gb|EEP52335.1| tRNA-specific adenosine deaminase [Clostridium butyricum E4 str.
           BoNT E BL5262]
          Length = 149

 Score = 86.7 bits (213), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 49/102 (48%), Positives = 59/102 (57%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           F+  A  EA  A  + EIPVGAV V +  II R  N    L DVTAHAEILAI+     L
Sbjct: 3   FIDEAKAEAIKAYDKGEIPVGAVIVKDGVIIGRGHNLKETLNDVTAHAEILAIKEASNNL 62

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGG 108
               L   ++YVTLEPC MCA+AI  +RI ++Y G  N   G
Sbjct: 63  GDWRLDGAEMYVTLEPCPMCASAIVQSRISKVYIGTFNKDMG 104


>gi|227499915|ref|ZP_03930008.1| nucleoside deaminase [Anaerococcus tetradius ATCC 35098]
 gi|227218024|gb|EEI83297.1| nucleoside deaminase [Anaerococcus tetradius ATCC 35098]
          Length = 169

 Score = 86.7 bits (213), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 53/143 (37%), Positives = 74/143 (51%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  A+ EA+ A    E+PVGAV VL+ KII R  N   + K    HAEI+AI+     +
Sbjct: 19  FMGEAINEARLARFIEEVPVGAVIVLDGKIIGRGHNYTFKGKSALKHAEIMAIKEASAYI 78

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L    +YVT+EPC+MCA AI  +RI RL  G  + K G   + T      +  H  
Sbjct: 79  DDFRLERATMYVTMEPCSMCAGAIINSRIDRLVIGIRDHKRGACGSNTNITGDRSQLHYL 138

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           +   G+ ++ +   IQ FF+  R
Sbjct: 139 DAEFGLRDEEALYEIQTFFRYLR 161


>gi|296141715|ref|YP_003648958.1| CMP/dCMP deaminase zinc-binding protein [Tsukamurella paurometabola
           DSM 20162]
 gi|296029849|gb|ADG80619.1| CMP/dCMP deaminase zinc-binding protein [Tsukamurella paurometabola
           DSM 20162]
          Length = 144

 Score = 86.7 bits (213), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 56/144 (38%), Positives = 73/144 (50%), Gaps = 3/144 (2%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIR-MGCRI 65
           M  ALE A  +   +++PVGAV +  +  +++RAGNR   L D TAHAE+LAIR    R 
Sbjct: 1   MGLALEAAGLSG-PDDVPVGAVILDPDGVVLARAGNRREALADPTAHAEVLAIREAATRF 59

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
                L    L VTLEPC MCA A+  ARI RL +GA  PK G + +           H 
Sbjct: 60  GDGWRLGGCTLAVTLEPCAMCAGALVSARIERLVFGAYEPKTGAVGSVWDVVRDPRVTHR 119

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
             +  GI       ++ DFF   R
Sbjct: 120 VSVRGGIRAGECGALLTDFFAPHR 143


>gi|148828084|ref|YP_001292837.1| hypothetical protein CGSHiGG_08090 [Haemophilus influenzae PittGG]
 gi|148719326|gb|ABR00454.1| hypothetical protein CGSHiGG_08090 [Haemophilus influenzae PittGG]
          Length = 125

 Score = 86.7 bits (213), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 53/111 (47%), Positives = 66/111 (59%), Gaps = 1/111 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNK-IISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  ALE A  A    EIPVGAV V + + II    N +    D TAHAEI+A+R G + +
Sbjct: 15  MRYALELADKAEALGEIPVGAVLVDDARNIIGEGWNLSIVQSDPTAHAEIIALRNGAKNI 74

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFY 117
               L    LYVTLEPCTMCA AI  +RI+RL +GAS+ K G I +   F+
Sbjct: 75  QNYRLLNSTLYVTLEPCTMCAGAILHSRIKRLVFGASDYKTGAIGSRFLFF 125


>gi|168039996|ref|XP_001772482.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162676279|gb|EDQ62764.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 353

 Score = 86.7 bits (213), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 48/114 (42%), Positives = 63/114 (55%), Gaps = 11/114 (9%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  A  EA+ A  R E+PVG V V + ++I R  N   E ++ T HAE++AI M     
Sbjct: 168 FMKLAFIEAREALARLEVPVGCVIVNDGEVIGRGSNCTNETRNATRHAEMVAIDMVLSKW 227

Query: 67  SQ-----------EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109
            Q           E   + DLYVT EPC MCAAA+SL+  R++YYG  N + GG
Sbjct: 228 QQLSATPNVNPSTEGFQQCDLYVTCEPCIMCAAALSLSGFRKIYYGCDNERFGG 281


>gi|317123562|ref|YP_004097674.1| tRNA-adenosine deaminase [Intrasporangium calvum DSM 43043]
 gi|315587650|gb|ADU46947.1| tRNA-adenosine deaminase [Intrasporangium calvum DSM 43043]
          Length = 190

 Score = 86.7 bits (213), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 44/129 (34%), Positives = 68/129 (52%), Gaps = 1/129 (0%)

Query: 22  NEIPVGAVAVLNNK-IISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80
           +++PVGAV + ++  +I R  N   EL D T HAE++A+R     +    L    L VTL
Sbjct: 37  DDVPVGAVVIGSDGLVIGRGRNVREELGDPTGHAEVIALRSAAAAVGTWRLDGATLAVTL 96

Query: 81  EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140
           EPC MCA A   AR+ R+ +GA +PK G   +           H  ++  G+  + +  +
Sbjct: 97  EPCVMCAGAAIAARVERIVFGAWDPKAGACGSVWDLTRDPLATHRADVVGGVRAEEAATL 156

Query: 141 IQDFFKERR 149
           + DFF+ RR
Sbjct: 157 LVDFFERRR 165


>gi|21222441|ref|NP_628220.1| deaminase [Streptomyces coelicolor A3(2)]
 gi|289770376|ref|ZP_06529754.1| deaminase [Streptomyces lividans TK24]
 gi|13122131|emb|CAC32309.1| putative deaminase [Streptomyces coelicolor A3(2)]
 gi|289700575|gb|EFD68004.1| deaminase [Streptomyces lividans TK24]
          Length = 143

 Score = 86.7 bits (213), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 48/128 (37%), Positives = 71/128 (55%), Gaps = 2/128 (1%)

Query: 23  EIPVGAVAVL-NNKIISRAGNRNRELK-DVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80
           ++PVGAV +  + + +  AG+  RE   D TAHAE+LAIR     L +  L    L VTL
Sbjct: 16  DVPVGAVVLAPDGRTVLSAGHNEREATGDPTAHAEVLAIRRAAGELGEWRLSGCTLVVTL 75

Query: 81  EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140
           EPCTMCA A+  +R+ R+ YGA + K G   +          +H PE+  G+      ++
Sbjct: 76  EPCTMCAGALVQSRVDRVVYGARDDKAGAAGSLWDVVRDRRLNHRPEVIEGVLADDCARL 135

Query: 141 IQDFFKER 148
           + DFF++R
Sbjct: 136 LTDFFRDR 143


>gi|254430861|ref|ZP_05044564.1| tRNA-specific adenosine deaminase [Cyanobium sp. PCC 7001]
 gi|197625314|gb|EDY37873.1| tRNA-specific adenosine deaminase [Cyanobium sp. PCC 7001]
          Length = 206

 Score = 86.7 bits (213), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 50/145 (34%), Positives = 77/145 (53%), Gaps = 3/145 (2%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLN--NKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           +M   L  AQ      EIPV A AVL+   + I    NR    +D   HAE++A+R   +
Sbjct: 53  WMERLLRCAQRVGEDGEIPV-AAAVLDQHGRCIGWGCNRRERQQDPLGHAELVALRQASQ 111

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
           +L    L    L VTLEPC MCA A+  ARI  L YGA +PK G + +        + HH
Sbjct: 112 LLGDWRLNSCTLLVTLEPCPMCAGALVQARIGTLVYGAPDPKRGAVGSCLDLVRHPSAHH 171

Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149
              +  G++ +++ ++++ +F++RR
Sbjct: 172 HMRVVGGLAGEQAGELLKAWFRQRR 196


>gi|302383496|ref|YP_003819319.1| CMP/dCMP deaminase zinc-binding protein [Brevundimonas
           subvibrioides ATCC 15264]
 gi|302194124|gb|ADL01696.1| CMP/dCMP deaminase zinc-binding protein [Brevundimonas
           subvibrioides ATCC 15264]
          Length = 150

 Score = 86.7 bits (213), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 54/130 (41%), Positives = 71/130 (54%), Gaps = 2/130 (1%)

Query: 22  NEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVT 79
            E+PVGAV V      +++   N      D TAHAEI AIR          L  + LYVT
Sbjct: 15  GEVPVGAVIVDETTGTVVATGANAPISGHDPTAHAEIQAIRAAAAATGNYRLTGLTLYVT 74

Query: 80  LEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139
           LEPC MCA AIS ARI R+ +GA +PKGG + +G + +   T H  P I  G+    S +
Sbjct: 75  LEPCAMCAGAISHARIGRVVWGADDPKGGAVIHGPRLFDQPTLHSRPVIEGGVLADASAE 134

Query: 140 IIQDFFKERR 149
            ++ FF+ RR
Sbjct: 135 SLRAFFRARR 144


>gi|256827973|ref|YP_003156701.1| CMP/dCMP deaminase zinc-binding [Desulfomicrobium baculatum DSM
           4028]
 gi|256577149|gb|ACU88285.1| CMP/dCMP deaminase zinc-binding [Desulfomicrobium baculatum DSM
           4028]
          Length = 190

 Score = 86.7 bits (213), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 55/144 (38%), Positives = 74/144 (51%), Gaps = 1/144 (0%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNN-KIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           FM  AL+ A  A  R ++PVGAV V  N +I+ R  NR     D TAHAEILA+R     
Sbjct: 35  FMCEALQLAGLAEGRGDVPVGAVVVDGNGRILGRGENRTIFENDPTAHAEILALRQAGAK 94

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           +    L +  L VTLEPC MC  A+  AR+  + Y A +PK G + +      L   +H 
Sbjct: 95  VGNHRLTDAVLVVTLEPCIMCLGAVIQARLAGVVYAAKDPKAGCLVSRMSGTELPWSNHH 154

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
                G+ EQ     +  FF++RR
Sbjct: 155 FWSLGGVLEQECSAKLSGFFQKRR 178


>gi|56707349|ref|YP_169245.1| zinc-binding domain-containing protein [Francisella tularensis
           subsp. tularensis SCHU S4]
 gi|110669819|ref|YP_666376.1| zinc-binding domain-containing protein [Francisella tularensis
           subsp. tularensis FSC198]
 gi|56603841|emb|CAG44817.1| Zinc-binding domain protein [Francisella tularensis subsp.
           tularensis SCHU S4]
 gi|110320152|emb|CAL08200.1| Zinc-binding domain protein [Francisella tularensis subsp.
           tularensis FSC198]
 gi|282158481|gb|ADA77872.1| Zinc-binding domain protein [Francisella tularensis subsp.
           tularensis NE061598]
          Length = 153

 Score = 86.7 bits (213), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 49/143 (34%), Positives = 74/143 (51%), Gaps = 1/143 (0%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  A ++A  A    E+P+GAV V +++II +  N+   L D TAHAEIL +R     L
Sbjct: 11  FMQKAYQQALLAYQAGEVPIGAVLVRDDQIIVQNFNQTIGLNDPTAHAEILVLRSAALKL 70

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L    LYVTLEPC MC   +  AR+  L Y   + + G      + +     +H+ 
Sbjct: 71  GNYRLVNTKLYVTLEPCIMCLGGLIQARVPELVYACDDSRVGAFSR-EKLHHNKNINHNL 129

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
            +  G+      ++++DFFK+RR
Sbjct: 130 GVTAGVMADECSKLLKDFFKQRR 152


>gi|330805063|ref|XP_003290507.1| hypothetical protein DICPUDRAFT_81234 [Dictyostelium purpureum]
 gi|325079386|gb|EGC32989.1| hypothetical protein DICPUDRAFT_81234 [Dictyostelium purpureum]
          Length = 259

 Score = 86.3 bits (212), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 52/121 (42%), Positives = 72/121 (59%), Gaps = 13/121 (10%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  A++E + A    E+PV  V V NN+II+R  N+    K+ T HAE+ A       L
Sbjct: 46  FMKEAVKEGEKALKEGEVPVACVIVHNNQIIARGSNKTNIKKNGTRHAELEAFDQ--IFL 103

Query: 67  SQEI--------LPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
           ++E+        L E DLYVT+EPC MCA A+SLA+I R+++G  N K GG  NG+  Y+
Sbjct: 104 NKELNERFKDTLLVECDLYVTVEPCLMCAGALSLAKINRVFFGCHNDKFGG--NGS-VYS 160

Query: 119 L 119
           L
Sbjct: 161 L 161


>gi|323499747|ref|ZP_08104710.1| tRNA-specific adenosine deaminase [Vibrio sinaloensis DSM 21326]
 gi|323315193|gb|EGA68241.1| tRNA-specific adenosine deaminase [Vibrio sinaloensis DSM 21326]
          Length = 129

 Score = 86.3 bits (212), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 46/100 (46%), Positives = 61/100 (61%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  AL  A+ A    E+PVGAV V N+++I    NR     D TAHAEI+A+R G  +L
Sbjct: 22  WMRHALTLAKRAWDEREVPVGAVLVHNHRVIGEGWNRPIGRHDPTAHAEIMALRQGGLVL 81

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPK 106
               L +  LYVTLEPC MCA A+  +RI R+ +GA + K
Sbjct: 82  QNYRLLDTTLYVTLEPCVMCAGAMVHSRIGRVVFGARDDK 121


>gi|319787039|ref|YP_004146514.1| CMP/dCMP deaminase zinc-binding protein [Pseudoxanthomonas
           suwonensis 11-1]
 gi|317465551|gb|ADV27283.1| CMP/dCMP deaminase zinc-binding protein [Pseudoxanthomonas
           suwonensis 11-1]
          Length = 366

 Score = 86.3 bits (212), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 51/131 (38%), Positives = 76/131 (58%), Gaps = 5/131 (3%)

Query: 22  NEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80
           +EIPVGAV V    ++I    NRN    D +AHAEI+A+R   + LS   L    LYVTL
Sbjct: 233 DEIPVGAVVVSAAGEVIGEGWNRNILDHDPSAHAEIMAMRQAGQALSNHRLVGATLYVTL 292

Query: 81  EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP--EIYPGISEQRSR 138
           EPC MCA A+  ARI R+ YGA++PK G    G+ F  +    H+   ++  G+  + + 
Sbjct: 293 EPCAMCAMALVHARIARVVYGAADPKTGAC--GSVFDVIGDPRHNHRVQVQGGVLGEEAG 350

Query: 139 QIIQDFFKERR 149
           + + ++F+ +R
Sbjct: 351 RRLTNYFRAKR 361


>gi|32490887|ref|NP_871141.1| hypothetical protein WGLp138 [Wigglesworthia glossinidia
           endosymbiont of Glossina brevipalpis]
 gi|25166093|dbj|BAC24284.1| yfhC [Wigglesworthia glossinidia endosymbiont of Glossina
           brevipalpis]
          Length = 151

 Score = 86.3 bits (212), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 53/147 (36%), Positives = 77/147 (52%), Gaps = 11/147 (7%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  AL  A  A    EIP+G+V +L + II    N++ +  D +AHAEILA+R   + ++
Sbjct: 1   MYHALYLANKAKKFGEIPIGSVVILKDNIIGEGWNQSIKKNDPSAHAEILALRSAGKNIN 60

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT---LATC-- 122
              L   ++Y T+EPC MC  AI  AR+ RL +GA   K         F+T   L  C  
Sbjct: 61  NYRLLNTEIYTTIEPCIMCIGAIINARVSRLIFGARKTK------KINFFTKDLLNNCNL 114

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H   +  GI E+  ++II  FF + R
Sbjct: 115 NHKISLTEGILEENCKKIINKFFSKIR 141


>gi|126175184|ref|YP_001051333.1| CMP/dCMP deaminase zinc-binding [Shewanella baltica OS155]
 gi|125998389|gb|ABN62464.1| tRNA-adenosine deaminase [Shewanella baltica OS155]
          Length = 175

 Score = 86.3 bits (212), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 50/143 (34%), Positives = 72/143 (50%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  A+  A+ A    E+PVGAV V + + I+   N +    D +AHAEIL +R   R++
Sbjct: 16  WMQVAMLMAEKAEAEGEVPVGAVLVKDGQQIATGYNLSISQHDPSAHAEILCLREAGRLV 75

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  LYVTLEPC MCA A+  +RI R+ +GA + K G              +H  
Sbjct: 76  ENYRLLDATLYVTLEPCAMCAGAMVHSRIARVVFGARDEKTGAAGTVVNLLQHPAFNHQV 135

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+  G+        +  FFK RR
Sbjct: 136 EVTSGVLADACSAQLSRFFKRRR 158


>gi|119714544|ref|YP_921509.1| tRNA-adenosine deaminase [Nocardioides sp. JS614]
 gi|119535205|gb|ABL79822.1| tRNA-adenosine deaminase [Nocardioides sp. JS614]
          Length = 143

 Score = 86.3 bits (212), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 50/143 (34%), Positives = 78/143 (54%), Gaps = 1/143 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  AL+EA+ A    ++P+GAV +  +   ++R  N      D T HAE++A+R   R  
Sbjct: 1   MRTALDEARAALASGDVPIGAVVLDPDGTPVARGRNVREADHDPTGHAEVVALRAAARAR 60

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
            +  L    L VTLEPCTMCA A  L+R+ R+ +GA +PK G + +          +H P
Sbjct: 61  GEWRLEGHTLVVTLEPCTMCAGAAVLSRVERIVFGAWDPKAGAVGSLWDVVRDRRLNHRP 120

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+  G+  + S  +++DFF  +R
Sbjct: 121 EVISGVLAEESAGLLEDFFLTQR 143


>gi|145592768|ref|YP_001157065.1| CMP/dCMP deaminase, zinc-binding [Salinispora tropica CNB-440]
 gi|145302105|gb|ABP52687.1| tRNA-adenosine deaminase [Salinispora tropica CNB-440]
          Length = 153

 Score = 86.3 bits (212), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 48/126 (38%), Positives = 69/126 (54%), Gaps = 1/126 (0%)

Query: 22  NEIPVGAVAVLNNKIISRAGNRNRELK-DVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80
           ++IPVGA+ +  +      G   REL  D TAHAE+LA+R     L +  L    L VTL
Sbjct: 28  DDIPVGALLLGPDGAELATGRNERELTGDPTAHAEVLALRRAAGRLGRWRLDGCTLVVTL 87

Query: 81  EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140
           EPCTMCA A+ LAR+  + +GA  PK G   +          +H PE+Y G+ E  +  +
Sbjct: 88  EPCTMCAGALVLARVSTVVFGAWEPKTGAAGSLWDVLRDRRLNHRPEVYGGVLETETAAV 147

Query: 141 IQDFFK 146
           ++ FF+
Sbjct: 148 LRAFFR 153


>gi|78184835|ref|YP_377270.1| cytidine/deoxycytidylate deaminase family protein [Synechococcus
           sp. CC9902]
 gi|78169129|gb|ABB26226.1| tRNA-adenosine deaminase [Synechococcus sp. CC9902]
          Length = 147

 Score = 86.3 bits (212), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 47/143 (32%), Positives = 72/143 (50%), Gaps = 1/143 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M   L+ AQ   L  E+PV AV +  N + I    NR    +D   HAE++A++    +L
Sbjct: 1   MKVLLQRAQVNGLSGEVPVAAVVLDANGRAIGHGRNRRETKQDPLGHAELVALQQAALVL 60

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
                 +  L VTLEPC MCA A+  AR+  + +GA + K GG+       T  + HH  
Sbjct: 61  GDWRFNQCCLIVTLEPCPMCAGALVQARMGTVVFGAHDRKRGGLGGTMNLATHTSAHHKM 120

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
            +  G+ E  +   ++ +FK+RR
Sbjct: 121 TVIGGVMEAEASTQLEQWFKQRR 143


>gi|311112334|ref|YP_003983556.1| tRNA-adenosine deaminase [Rothia dentocariosa ATCC 17931]
 gi|310943828|gb|ADP40122.1| tRNA-adenosine deaminase [Rothia dentocariosa ATCC 17931]
          Length = 176

 Score = 86.3 bits (212), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 55/146 (37%), Positives = 76/146 (52%), Gaps = 5/146 (3%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           +M  AL+E + AA   EIP+GAV V    +II    N      D T HAEI AIR   + 
Sbjct: 28  WMRLALDEGKRAACAGEIPIGAVVVNAEGEIIGSGHNSREHDHDPTGHAEIHAIRQAAQH 87

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT--CH 123
           L    L E  L VT+EPC MCA AI +ARI  +  GA   K G +  G+Q+  L      
Sbjct: 88  LKTWRLEECTLVVTVEPCLMCAGAILMARIPTVVMGAWEEKTGAV--GSQYDVLRDRRLG 145

Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149
              ++Y G+  +   ++++ FF+ RR
Sbjct: 146 LDVQVYAGVLREECAELMRTFFEVRR 171


>gi|118496774|ref|YP_897824.1| zinc-binding protein [Francisella tularensis subsp. novicida U112]
 gi|118422680|gb|ABK89070.1| zinc-binding protein [Francisella novicida U112]
          Length = 153

 Score = 86.3 bits (212), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 49/143 (34%), Positives = 74/143 (51%), Gaps = 1/143 (0%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  A ++A  A    E+P+GAV V + +II++  N+   L D TAHAEIL +R     L
Sbjct: 11  FMQKAYQQALLAYQAGEVPIGAVLVRDGQIIAQNFNQTIGLNDPTAHAEILVLRSAALKL 70

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L    LYVTLEPC MC   +  AR+  L Y   + + G      + +     +H+ 
Sbjct: 71  DNYRLVNTKLYVTLEPCIMCLGGLIQARVPELVYACDDSRVGAFSR-EKLHHNKNINHNL 129

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
            +  G+      ++++DFFK+RR
Sbjct: 130 GVTAGVMADECGKLLKDFFKQRR 152


>gi|62262991|gb|AAX78118.1| unknown protein [synthetic construct]
          Length = 188

 Score = 86.3 bits (212), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 49/143 (34%), Positives = 74/143 (51%), Gaps = 1/143 (0%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  A ++A  A    E+P+GAV V +++II +  N+   L D TAHAEIL +R     L
Sbjct: 37  FMQKAYQQALLAYQAGEVPIGAVLVRDDQIIVQNFNQTIGLNDPTAHAEILVLRSAALKL 96

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L    LYVTLEPC MC   +  AR+  L Y   + + G      + +     +H+ 
Sbjct: 97  GNYRLVNTKLYVTLEPCIMCLGGLIQARVPELVYACDDSRVGAFSR-EKLHHNKNINHNL 155

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
            +  G+      ++++DFFK+RR
Sbjct: 156 GVTAGVMADECSKLLKDFFKQRR 178


>gi|54022202|ref|YP_116444.1| putative cytidine/deoxycytidylate deaminase [Nocardia farcinica IFM
           10152]
 gi|54013710|dbj|BAD55080.1| putative cytidine/deoxycytidylate deaminase [Nocardia farcinica IFM
           10152]
          Length = 159

 Score = 86.3 bits (212), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 49/129 (37%), Positives = 68/129 (52%), Gaps = 2/129 (1%)

Query: 23  EIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEI-LPEVDLYVTL 80
           ++PVGAV      + ++RA N      D TAHAEILA+R   ++      L    L VTL
Sbjct: 31  DVPVGAVVFDAQGRELARAANAREASGDPTAHAEILALRRAAQVHGDGWRLAGATLAVTL 90

Query: 81  EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140
           EPCTMCA A+ LAR+ RL +GA  PK G + +          +H PE+  G+ E     +
Sbjct: 91  EPCTMCAGALVLARVDRLVFGAWEPKTGAVGSLWDVVRDRRLNHRPEVRGGVLETECAAL 150

Query: 141 IQDFFKERR 149
           +  FF+  R
Sbjct: 151 LDTFFRTHR 159


>gi|89257159|ref|YP_514521.1| zinc-binding domain-containing protein [Francisella tularensis
           subsp. holarctica LVS]
 gi|115315498|ref|YP_764221.1| cytosine/adenosine deaminase [Francisella tularensis subsp.
           holarctica OSU18]
 gi|134302708|ref|YP_001122676.1| cytidine and deoxycytidylate deaminase zinc-binding
           domain-containing protein [Francisella tularensis subsp.
           tularensis WY96-3418]
 gi|156503384|ref|YP_001429449.1| cytidine/deoxycytidylate deaminase zinc-binding domain-containing
           protein [Francisella tularensis subsp. holarctica
           FTNF002-00]
 gi|187932249|ref|YP_001892234.1| zinc-binding protein [Francisella tularensis subsp. mediasiatica
           FSC147]
 gi|290953357|ref|ZP_06557978.1| zinc-binding protein [Francisella tularensis subsp. holarctica
           URFT1]
 gi|295313404|ref|ZP_06804011.1| zinc-binding protein [Francisella tularensis subsp. holarctica
           URFT1]
 gi|89144990|emb|CAJ80350.1| Zinc-binding domain protein [Francisella tularensis subsp.
           holarctica LVS]
 gi|115130397|gb|ABI83584.1| probable cytosine/adenosine deaminase [Francisella tularensis
           subsp. holarctica OSU18]
 gi|134050485|gb|ABO47556.1| Cytidine and deoxycytidylate deaminase Zinc-binding domain protein
           [Francisella tularensis subsp. tularensis WY96-3418]
 gi|156253987|gb|ABU62493.1| cytidine/deoxycytidylate deaminase, zinc-binding domain protein
           [Francisella tularensis subsp. holarctica FTNF002-00]
 gi|187713158|gb|ACD31455.1| zinc-binding protein [Francisella tularensis subsp. mediasiatica
           FSC147]
          Length = 153

 Score = 85.9 bits (211), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 49/143 (34%), Positives = 74/143 (51%), Gaps = 1/143 (0%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  A ++A  A    E+P+GAV V +++II +  N+   L D TAHAEIL +R     L
Sbjct: 11  FMQKAYQQALLAYQAGEVPIGAVLVRDDQIIVQNFNQTIGLNDPTAHAEILVLRSAALKL 70

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L    LYVTLEPC MC   +  AR+  L Y   + + G      + +     +H+ 
Sbjct: 71  GNYRLVNTKLYVTLEPCIMCLGGLIQARVPELVYACDDSRVGAFSR-EKLHHNKNINHNL 129

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
            +  G+      ++++DFFK+RR
Sbjct: 130 GVTAGVMADECGKLLKDFFKQRR 152


>gi|296166870|ref|ZP_06849287.1| tRNA-specific adenosine deaminase [Mycobacterium parascrofulaceum
           ATCC BAA-614]
 gi|295897747|gb|EFG77336.1| tRNA-specific adenosine deaminase [Mycobacterium parascrofulaceum
           ATCC BAA-614]
          Length = 152

 Score = 85.9 bits (211), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 49/129 (37%), Positives = 70/129 (54%), Gaps = 2/129 (1%)

Query: 23  EIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEI-LPEVDLYVTL 80
           ++P+GAV V  +   ++RA N    L D TAHAEILA+R    +L     L    L VT+
Sbjct: 22  DVPIGAVVVGADGTELARAVNAREALGDPTAHAEILALRAAAGVLGDGWRLEGATLAVTV 81

Query: 81  EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140
           EPCTMCA A+ LAR+ RL +GA  PK G + +          +H PE+  G+  +     
Sbjct: 82  EPCTMCAGALVLARVGRLVFGAWEPKTGAVGSLWDVVRDRRLNHRPEVRGGVLAEECAAP 141

Query: 141 IQDFFKERR 149
           ++ FF  +R
Sbjct: 142 LEAFFARQR 150


>gi|145221806|ref|YP_001132484.1| CMP/dCMP deaminase, zinc-binding [Mycobacterium gilvum PYR-GCK]
 gi|315446457|ref|YP_004079336.1| tRNA-adenosine deaminase [Mycobacterium sp. Spyr1]
 gi|145214292|gb|ABP43696.1| tRNA-adenosine deaminase [Mycobacterium gilvum PYR-GCK]
 gi|315264760|gb|ADU01502.1| tRNA-adenosine deaminase [Mycobacterium sp. Spyr1]
          Length = 149

 Score = 85.9 bits (211), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 51/145 (35%), Positives = 76/145 (52%), Gaps = 3/145 (2%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
            +  AL+ A+ A  R+ +P+GAV        ++RA N   EL D TAHAEILA+R    +
Sbjct: 6   LIRAALDAARGAGPRD-VPIGAVVFDAEGTELARAANAREELGDPTAHAEILALRAAALV 64

Query: 66  LSQEI-LPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
                 L    L VT+EPCTMCA A+ +AR+ R+ +GA  PK G + +           H
Sbjct: 65  HGDGWRLEGATLAVTVEPCTMCAGALVMARVARVVFGAWEPKTGAVGSLWDVVRDRRLTH 124

Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149
            P++  G+ E      +++FF  +R
Sbjct: 125 RPQVRGGVLEAECAAPLEEFFARQR 149


>gi|328943526|ref|ZP_08240991.1| tRNA-specific adenosine deaminase [Atopobium vaginae DSM 15829]
 gi|327491495|gb|EGF23269.1| tRNA-specific adenosine deaminase [Atopobium vaginae DSM 15829]
          Length = 237

 Score = 85.9 bits (211), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 57/146 (39%), Positives = 81/146 (55%), Gaps = 6/146 (4%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M CAL +AQ AAL  E+P+GAV V NN I+S A N  +   + + HAE +A+    + L
Sbjct: 92  YMHCALAQAQKAALEQEVPIGAVVVCNNTILSAAHNLRQHSHNPSDHAEFIAMLQAAKKL 151

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG---IENGTQFYTLATCH 123
               L    +YVTLEPC MCA  +  ARI R  +GA + K G    + N +  + L   +
Sbjct: 152 DSWHLERCCVYVTLEPCLMCAGLMLNARIARCVFGAYDQKAGACGSLYNVSNDFRL---N 208

Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149
           HS E+  G+    S  ++Q FFK +R
Sbjct: 209 HSFELKGGVLADESANLLQQFFKHKR 234


>gi|319779703|ref|YP_004130616.1| tRNA-specific adenosine-34 deaminase [Taylorella equigenitalis
           MCE9]
 gi|317109727|gb|ADU92473.1| tRNA-specific adenosine-34 deaminase [Taylorella equigenitalis
           MCE9]
          Length = 162

 Score = 85.9 bits (211), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 54/145 (37%), Positives = 77/145 (53%), Gaps = 3/145 (2%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           FM  AL+ A+ A    E+PVGAV V  N  I+ +  N+     D TAHAEI+A+R     
Sbjct: 11  FMQLALQNAEKAYKSGEVPVGAVLVGPNQDILGQGYNQVIGTSDSTAHAEIVALREANLS 70

Query: 66  LSQEILPE-VDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
           +    LP    ++VTLEPC MC  A+  AR+  L  G+ +PK G        +     HH
Sbjct: 71  IQNYRLPSGCTMFVTLEPCIMCLGALIHARLEHLVIGSRDPKTGACGGRLSIHASDLNHH 130

Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149
                  +SE+ S+ I++DFF+E+R
Sbjct: 131 MHTTVGVLSEECSK-ILKDFFREKR 154


>gi|124516363|gb|EAY57871.1| putative zinc-binding cytidine/deoxycytidylate deaminase
           [Leptospirillum rubarum]
          Length = 164

 Score = 85.5 bits (210), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 49/144 (34%), Positives = 73/144 (50%), Gaps = 1/144 (0%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           +M+ AL EA+ A  +NEIP+GA+ V  N  ++ R  N+     D TAHAEI+A+R     
Sbjct: 15  WMTEALSEAKTAMEKNEIPIGAILVDANGTVLGRGHNQRVGSTDPTAHAEIVALRTSGLH 74

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           +    LP   LYVT+EPC MC  A+  AR+  + +G   P+ G   +           H 
Sbjct: 75  VKNYRLPGTTLYVTVEPCLMCFGALLEARVETVVFGIREPRWGVTGSLYDLQNDPRFPHR 134

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
             +  G+       ++Q FF+ RR
Sbjct: 135 IRVREGVLSHACLDLLQSFFQSRR 158


>gi|15837614|ref|NP_298302.1| hypothetical protein XF1012 [Xylella fastidiosa 9a5c]
 gi|9105950|gb|AAF83822.1|AE003939_1 conserved hypothetical protein [Xylella fastidiosa 9a5c]
          Length = 167

 Score = 85.5 bits (210), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 52/145 (35%), Positives = 75/145 (51%), Gaps = 2/145 (1%)

Query: 7   FMSCALEEAQNAALR-NEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           +M  AL  A  AA   +EIPVGAV +     ++    N N    D +AHAEI+A+R    
Sbjct: 16  WMRHALTLAHRAATEFDEIPVGAVLISPEGTLLGEGWNYNITSHDPSAHAEIMALRAAGH 75

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
            L    +P   LYVTLEPC MCA AI  ARI  L Y A++PK G   +          +H
Sbjct: 76  QLRNHRMPGCTLYVTLEPCLMCAMAIIHARIAHLIYAAADPKTGACGSTFDILNDPRHNH 135

Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149
              +Y G+  + + + + ++F+ +R
Sbjct: 136 HVHVYGGLLAEEASRRLTNYFRTKR 160


>gi|118468323|ref|YP_890544.1| cytidine and deoxycytidylate deaminase family protein
           [Mycobacterium smegmatis str. MC2 155]
 gi|118169610|gb|ABK70506.1| cytidine and deoxycytidylate deaminase family protein
           [Mycobacterium smegmatis str. MC2 155]
          Length = 149

 Score = 85.5 bits (210), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 50/141 (35%), Positives = 75/141 (53%), Gaps = 3/141 (2%)

Query: 11  ALEEAQNAALRNEIPVGAVA-VLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQE 69
           ALE A+ A  R+ +P+GAV    +   ++RA N      D   HAEI+A+R   ++L   
Sbjct: 10  ALEAARTAGPRD-VPIGAVVYAADGTELARAVNVREAYGDPAGHAEIVAMRAAAKVLGDG 68

Query: 70  I-LPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEI 128
             L    L VT+EPCTMCA A+ LAR+ RL +GA  PK G + +          +H PE+
Sbjct: 69  WRLEGATLAVTVEPCTMCAGALVLARVSRLVFGAWEPKTGAVGSLWDVVRDRRLNHRPEV 128

Query: 129 YPGISEQRSRQIIQDFFKERR 149
             G+       ++++FF  +R
Sbjct: 129 IGGVLADECAALLEEFFARQR 149


>gi|308234244|ref|ZP_07664981.1| CMP/dCMP deaminase zinc-binding protein [Atopobium vaginae DSM
           15829]
          Length = 216

 Score = 85.5 bits (210), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 57/146 (39%), Positives = 81/146 (55%), Gaps = 6/146 (4%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M CAL +AQ AAL  E+P+GAV V NN I+S A N  +   + + HAE +A+    + L
Sbjct: 71  YMHCALAQAQKAALEQEVPIGAVVVCNNTILSAAHNLRQHSHNPSDHAEFIAMLQAAKKL 130

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG---IENGTQFYTLATCH 123
               L    +YVTLEPC MCA  +  ARI R  +GA + K G    + N +  + L   +
Sbjct: 131 DSWHLERCCVYVTLEPCLMCAGLMLNARIARCVFGAYDQKAGACGSLYNVSNDFRL---N 187

Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149
           HS E+  G+    S  ++Q FFK +R
Sbjct: 188 HSFELKGGVLADESANLLQQFFKHKR 213


>gi|288942407|ref|YP_003444647.1| CMP/dCMP deaminase protein [Allochromatium vinosum DSM 180]
 gi|288897779|gb|ADC63615.1| CMP/dCMP deaminase zinc-binding protein [Allochromatium vinosum DSM
           180]
          Length = 166

 Score = 85.5 bits (210), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 49/102 (48%), Positives = 61/102 (59%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  ALE A+ AA   E+PVGAV V   +I+    NR     D +AHAEI A+R   R +
Sbjct: 12  WMRHALELARCAAEEGEVPVGAVLVREGEILGEGWNRPIIRHDPSAHAEIQALRDAGRRV 71

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGG 108
               LP   LYVTLEPC MCA AI  AR+ ++ YGA +PK G
Sbjct: 72  GNYRLPGSILYVTLEPCVMCAGAIVHARVAQVIYGAPDPKAG 113


>gi|300742404|ref|ZP_07072425.1| cytidine/deoxycytidylate deaminase family protein [Rothia
           dentocariosa M567]
 gi|300381589|gb|EFJ78151.1| cytidine/deoxycytidylate deaminase family protein [Rothia
           dentocariosa M567]
          Length = 176

 Score = 85.5 bits (210), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 55/146 (37%), Positives = 75/146 (51%), Gaps = 5/146 (3%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           +M  AL+E + AA   EIP+GAV V    +II    N      D T HAEI AIR   + 
Sbjct: 28  WMRLALDEGKRAACAGEIPIGAVVVNAEGEIIGSGHNSREHDHDPTGHAEIHAIRQAAQH 87

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT--CH 123
           L    L E  L VT+EPC MCA AI +ARI  +  GA   K G +  G+Q+  L      
Sbjct: 88  LKTWRLEECTLVVTVEPCLMCAGAILMARIPTVVMGAWEEKTGAV--GSQYDVLRDRRLG 145

Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149
              ++Y G+  +    +++ FF+ RR
Sbjct: 146 LDVQVYAGVLREECAGLMRTFFEARR 171


>gi|120406536|ref|YP_956365.1| CMP/dCMP deaminase [Mycobacterium vanbaalenii PYR-1]
 gi|119959354|gb|ABM16359.1| tRNA-adenosine deaminase [Mycobacterium vanbaalenii PYR-1]
          Length = 166

 Score = 85.5 bits (210), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 47/129 (36%), Positives = 70/129 (54%), Gaps = 2/129 (1%)

Query: 23  EIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEI-LPEVDLYVTL 80
           ++P+GAV    + + ++RA N   E  D TAHAEILA+R   R L     L    L VT+
Sbjct: 38  DVPIGAVVFAPDGRELARAANAREEFGDPTAHAEILALRAAARELGDGWRLEGATLAVTV 97

Query: 81  EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140
           EPCTMCA A+ +AR+ R+ +GA  PK G + +           H P++  G+ E      
Sbjct: 98  EPCTMCAGALVMARVARVVFGAWEPKTGAVGSLWDVVRDRRLTHRPQVRGGVLEAECAAP 157

Query: 141 IQDFFKERR 149
           +++FF  +R
Sbjct: 158 LEEFFAGQR 166


>gi|312200616|ref|YP_004020677.1| CMP/dCMP deaminase zinc-binding protein [Frankia sp. EuI1c]
 gi|311231952|gb|ADP84807.1| CMP/dCMP deaminase zinc-binding protein [Frankia sp. EuI1c]
          Length = 198

 Score = 85.5 bits (210), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 46/129 (35%), Positives = 69/129 (53%), Gaps = 1/129 (0%)

Query: 22  NEIPVGAVAVLNNKIISRAGNRNRELK-DVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80
            ++P+GAV +  +  +   G+  RE+  D T HAEI+A+R     + +  L    L VTL
Sbjct: 60  GDVPIGAVVIGADGTVLGRGHNIREVAADPTGHAEIVALRAAATAVGEWRLTGATLVVTL 119

Query: 81  EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140
           EPCTMCA A+ LAR+ RL YGA + K G + +          +H PE+  G++      +
Sbjct: 120 EPCTMCAGALVLARVDRLVYGAIDEKAGAVGSLWDVVRDRRLNHRPEVITGVAAPDCTAL 179

Query: 141 IQDFFKERR 149
           +  FF  RR
Sbjct: 180 LDTFFASRR 188


>gi|294791140|ref|ZP_06756297.1| tRNA(Ile)-lysidine synthase [Scardovia inopinata F0304]
 gi|294457611|gb|EFG25965.1| tRNA(Ile)-lysidine synthase [Scardovia inopinata F0304]
          Length = 152

 Score = 85.5 bits (210), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 52/144 (36%), Positives = 77/144 (53%), Gaps = 3/144 (2%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNR--ELKDVTAHAEILAIRMGCRI 65
           M  ALE A+ +A  +EIPVGAV VLN++    A  RN   E  D  +HAEI  +R   R+
Sbjct: 9   MGVALENARKSADFDEIPVGAV-VLNSEGAVLAAERNHREEKADPFSHAEIEVMREAARV 67

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
                  +  L VT+EPC MCA AI  A + R+ +GA + K G + +             
Sbjct: 68  RESWNFEDCTLVVTMEPCPMCAGAIVSAHMGRVVFGAWDEKMGALGSVWDIARDPHVGFR 127

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
           PE++ G+      +I+++FF+E+R
Sbjct: 128 PEVFGGVRADECAEILREFFEEKR 151


>gi|226941431|ref|YP_002796505.1| CumB [Laribacter hongkongensis HLHK9]
 gi|226716358|gb|ACO75496.1| CumB [Laribacter hongkongensis HLHK9]
          Length = 171

 Score = 85.5 bits (210), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 53/131 (40%), Positives = 68/131 (51%)

Query: 15  AQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEV 74
           AQ AA   E+PVGA+ VL  K+I R  N      D TAHAEI A+R          LP  
Sbjct: 8   AQEAAAAGEVPVGALVVLEGKVIGRGANAPIGRHDPTAHAEIAALRAAAERAGNYRLPGA 67

Query: 75  DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISE 134
           +LYVTLEPC MCA AI  ARI R+ +GAS+ K G   +    +     +H  E+  G+  
Sbjct: 68  ELYVTLEPCAMCAGAIQHARIARVVFGASDAKTGAAGSVVDLFAEPRLNHHAEVCGGLLA 127

Query: 135 QRSRQIIQDFF 145
                ++  FF
Sbjct: 128 DECAAVLSGFF 138


>gi|225013101|ref|ZP_03703515.1| CMP/dCMP deaminase zinc-binding [Flavobacteria bacterium MS024-2A]
 gi|225002759|gb|EEG40741.1| CMP/dCMP deaminase zinc-binding [Flavobacteria bacterium MS024-2A]
          Length = 154

 Score = 85.1 bits (209), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 55/143 (38%), Positives = 80/143 (55%), Gaps = 6/143 (4%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  AL EA+ AA  +E+PVGAV V+  +II+RA N    L DVTAHAE+ AI      L
Sbjct: 17  FMKQALAEAEKAAFADEVPVGAVVVVEQRIIARAHNLTERLHDVTAHAEMQAITAAANYL 76

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
           + + L    LYVTLEPC MCA A+  ++  R+ +GAS+ K G  +           H   
Sbjct: 77  NGKYLVGCTLYVTLEPCVMCAGALVWSQFDRVVFGASDSKRGFQQANLDL------HPKT 130

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
            +  G+  + ++ ++  FF ++R
Sbjct: 131 ILSGGVLAEEAKALLDAFFAKKR 153


>gi|301096603|ref|XP_002897398.1| tRNA-specific adenosine deaminase, putative [Phytophthora infestans
           T30-4]
 gi|262107089|gb|EEY65141.1| tRNA-specific adenosine deaminase, putative [Phytophthora infestans
           T30-4]
          Length = 130

 Score = 85.1 bits (209), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 48/108 (44%), Positives = 66/108 (61%), Gaps = 7/108 (6%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI-----RM 61
           FM  AL E + A +R E+PVG V V   +II+ A NR  EL + T HAEI+AI     + 
Sbjct: 9   FMREALLEGERALIRAEVPVGCVFVHKGEIIASASNRVNELCNATMHAEIVAIEAIAAKY 68

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109
           G +  + E+L +  LYVT EPC MCA A++   I+R+Y+G  N + GG
Sbjct: 69  GDK--ACEVLADCTLYVTCEPCIMCAGALAHVSIKRVYFGCHNDRFGG 114


>gi|297623312|ref|YP_003704746.1| tRNA(Ile)-lysidine synthetase [Truepera radiovictrix DSM 17093]
 gi|297164492|gb|ADI14203.1| tRNA(Ile)-lysidine synthetase [Truepera radiovictrix DSM 17093]
          Length = 556

 Score = 85.1 bits (209), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 52/143 (36%), Positives = 73/143 (51%), Gaps = 1/143 (0%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  AL EA+ AA R E+PVGAV V    ++ R  N  RE  D +AHAE+ AIR     L
Sbjct: 406 WMRLALNEARRAAERGELPVGAVVVRGGAVLGRGHNTTRESGDPSAHAELHAIRQAAAAL 465

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L    L+VTLEPC MC  A+  A + R+ YGA+N + G +  G           + 
Sbjct: 466 GDWRLAGCTLFVTLEPCPMCFGALLSAHLPRVVYGATNAREGAL-GGVADLQQHPWKRTV 524

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
            +  G+    +  ++  FF+ RR
Sbjct: 525 AVRGGVLAAEAGALLTAFFRARR 547


>gi|72160431|ref|YP_288088.1| tRNA-adenosine deaminase [Thermobifida fusca YX]
 gi|71914163|gb|AAZ54065.1| tRNA-adenosine deaminase [Thermobifida fusca YX]
          Length = 150

 Score = 85.1 bits (209), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 61/149 (40%), Positives = 81/149 (54%), Gaps = 8/149 (5%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELK-DVTAHAEILAIRMGCRIL 66
           M  ALEEA+  +   ++PVGAV +  + ++  AG+  RE   D TAHAE+LA+R   R L
Sbjct: 1   MRRALEEAEKTSSSGDVPVGAVVLDPDGVVIGAGHNEREATGDPTAHAEVLALRAAARRL 60

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L    L VTLEPCTMCA AI LARI RL YGA + + G + +          +H P
Sbjct: 61  GSWRLSGCTLAVTLEPCTMCAGAIVLARIERLIYGARDERAGAVGSLWDVVRDRRLNHRP 120

Query: 127 EIYPG------ISEQRSRQIIQDFFKERR 149
           E+ P       +S   SR ++ DFF   R
Sbjct: 121 EVIPPDLVDPELSAACSR-LLTDFFARHR 148


>gi|260436012|ref|ZP_05789982.1| tRNA-adenosine deaminase [Synechococcus sp. WH 8109]
 gi|260413886|gb|EEX07182.1| tRNA-adenosine deaminase [Synechococcus sp. WH 8109]
          Length = 167

 Score = 85.1 bits (209), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 45/141 (31%), Positives = 74/141 (52%), Gaps = 3/141 (2%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNN--KIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           +M   L+ A+ A    E+PV AV +L+   + I    NR +  +D   HAE++A++    
Sbjct: 20  WMDVLLQRAEEAGAEGEVPVAAV-ILDGQGRAIGHGRNRRQNDRDPLGHAELVALQQAAI 78

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
           +          L VTLEPC MCA A+  AR+  + + AS+PK GG+       T A+ HH
Sbjct: 79  VQDDWRFNNCTLIVTLEPCPMCAGALVQARMGTVIFAASDPKRGGLGGSLDLSTHASAHH 138

Query: 125 SPEIYPGISEQRSRQIIQDFF 145
             ++  G+ E  +R+ ++ +F
Sbjct: 139 HMKVIEGVREPEAREQLESWF 159


>gi|319760657|ref|YP_004124595.1| tRNA-specific adenosine deaminase [Candidatus Blochmannia vafer
           str. BVAF]
 gi|318039371|gb|ADV33921.1| tRNA-specific adenosine deaminase [Candidatus Blochmannia vafer
           str. BVAF]
          Length = 155

 Score = 85.1 bits (209), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 53/146 (36%), Positives = 74/146 (50%), Gaps = 2/146 (1%)

Query: 6   VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           ++M  A+  A  AAL   + +GAV V + +++    N      D +AHAEI+A+R+G   
Sbjct: 10  IWMRYAITLASVAALSGNVAIGAVLVYDGRLVGYGYNAALIFHDPSAHAEIIALRVGGNY 69

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIE--NGTQFYTLATCH 123
           L    L    LYVT+EPC MC  AI  ARI RL  GA   K   I       F   A  +
Sbjct: 70  LGNYRLLNTTLYVTMEPCIMCVGAIINARIHRLVCGAIGNKIRWINLLRINYFIDHAMIN 129

Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149
           H  +I  G+  +   + I+DFFK +R
Sbjct: 130 HQCDIKTGVLSEVCSKQIRDFFKYKR 155


>gi|288919170|ref|ZP_06413508.1| CMP/dCMP deaminase zinc-binding [Frankia sp. EUN1f]
 gi|288349417|gb|EFC83656.1| CMP/dCMP deaminase zinc-binding [Frankia sp. EUN1f]
          Length = 156

 Score = 85.1 bits (209), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 44/115 (38%), Positives = 60/115 (52%)

Query: 35  KIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLAR 94
           +++ R  N      D TAHAE++A+R     L    L    L VTLEPCTMCA A+ LAR
Sbjct: 29  QVLGRGHNAREATGDPTAHAEVIALRHAAAELGAWRLGGTTLVVTLEPCTMCAGALVLAR 88

Query: 95  IRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
           + R+ YGA +PK G + +          +H PE+  G+ EQ     +  FF  RR
Sbjct: 89  VDRVVYGAVDPKAGAVGSLWDVVRDRRLNHRPEVISGVREQECSDQLAAFFDGRR 143


>gi|308491803|ref|XP_003108092.1| hypothetical protein CRE_10287 [Caenorhabditis remanei]
 gi|308248940|gb|EFO92892.1| hypothetical protein CRE_10287 [Caenorhabditis remanei]
          Length = 171

 Score = 85.1 bits (209), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 49/147 (33%), Positives = 81/147 (55%), Gaps = 8/147 (5%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           F+ CA   AQ A   +E+PVG V V++ K I +  NR  E  D T HAE++A+    +  
Sbjct: 12  FLECAFNLAQEALDGDEVPVGCVFVVDGKEIGKGRNRVNETGDPTRHAEMVAVTEMWKKY 71

Query: 67  SQE---ILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN--GTQFYTLAT 121
            +E    L    LYV+LEPC MC++A+    IR++ YGA NP+ GG+ +    + Y +  
Sbjct: 72  GEECKDFLRRAVLYVSLEPCIMCSSAMYQLGIRKMVYGAENPRFGGVRSVGNAEKYRM-- 129

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKER 148
              + +I   +   RS  +++ F++++
Sbjct: 130 -EDNIQIVSNVWSDRSVAMLKSFYEKQ 155


>gi|310657417|ref|YP_003935138.1| yaaj [Clostridium sticklandii DSM 519]
 gi|308824195|emb|CBH20233.1| YaaJ [Clostridium sticklandii]
          Length = 157

 Score = 84.7 bits (208), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 47/108 (43%), Positives = 63/108 (58%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M     FM  AL+EA  +   NE+P+G V V + +II+RA N   + KD   HAE++AI+
Sbjct: 1   MMNKEFFMREALKEALKSYSINEVPIGCVIVKDGEIIARAHNNREQNKDPLGHAELIAIK 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGG 108
              + L    L   D+YVTLEPC MC+ AI  +RI  LY GA + K G
Sbjct: 61  NAAKHLGGWRLVGCDMYVTLEPCIMCSGAIMDSRIENLYIGAIDDKRG 108


>gi|146321900|ref|YP_001201611.1| cytosine/adenosine deaminase [Streptococcus suis 98HAH33]
 gi|145692706|gb|ABP93211.1| Cytosine/adenosine deaminase [Streptococcus suis 98HAH33]
          Length = 141

 Score = 84.7 bits (208), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 45/119 (37%), Positives = 65/119 (54%)

Query: 31  VLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAI 90
           V + +II R  N   EL     HAE++AI+    +     L +  L+VT+EPC MC+ AI
Sbjct: 3   VKDGQIIGRGHNAREELNQAIMHAEVMAIQEANNVEGNWRLLDSTLFVTIEPCVMCSGAI 62

Query: 91  SLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
            LARI ++ YGA+N K G   +     T    +H  ++  GI E     I+QDFF++RR
Sbjct: 63  GLARIPQVIYGATNKKFGAAGSLYDILTDERLNHRVKVETGILEAECANIMQDFFRQRR 121


>gi|312078286|ref|XP_003141672.1| tRNA-specific adenosine deaminase 2 [Loa loa]
 gi|307763164|gb|EFO22398.1| tRNA-specific adenosine deaminase 2 [Loa loa]
          Length = 205

 Score = 84.7 bits (208), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 49/149 (32%), Positives = 87/149 (58%), Gaps = 9/149 (6%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           F++ A E A +A L NE+PVG V V   + ++   N     K+ T HAE++A+ M  +  
Sbjct: 27  FLNRAFEIAVDAVLNNEVPVGCVFVFEGQEVAFGRNDVNRTKNPTYHAEMVALEMMKQWC 86

Query: 67  S------QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN-GTQFYTL 119
                  ++++    LYVTLEPC MCA+A+   R++++ YGA+N + GG+ + GT+    
Sbjct: 87  MDNGHELEDVMRRSTLYVTLEPCIMCASALYHLRLKKILYGAANERFGGLLSVGTR--EK 144

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKER 148
               H  EI P +S  R+ +++++F++++
Sbjct: 145 YGAEHFIEILPNLSVDRAVKLLKEFYEKQ 173


>gi|148239680|ref|YP_001225067.1| tRNA-specific adenosine deaminase [Synechococcus sp. WH 7803]
 gi|147848219|emb|CAK23770.1| tRNA-specific adenosine deaminase [Synechococcus sp. WH 7803]
          Length = 175

 Score = 84.7 bits (208), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 45/144 (31%), Positives = 73/144 (50%), Gaps = 1/144 (0%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           +M   L  A+      EIPV AV +    + I    NR   L D   HAE++A+R G  +
Sbjct: 18  WMQRLLNRAERVGATGEIPVAAVLLDEAGRCIGHGSNRRECLNDPLGHAELMALRQGAWL 77

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           L    +    L VTLEPC MCA A+  AR+ ++ + A + K GG+ +        + HH 
Sbjct: 78  LGDWRMNHCTLLVTLEPCPMCAGALVQARVGQVIFAARDSKRGGLGSTINLAEHQSAHHH 137

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
             +  G+ E+++  ++  +F++RR
Sbjct: 138 MRVVSGVLEEQASALLAGWFRQRR 161


>gi|226303819|ref|YP_002763777.1| tRNA-specific adenosine deaminase [Rhodococcus erythropolis PR4]
 gi|226182934|dbj|BAH31038.1| putative tRNA-specific adenosine deaminase [Rhodococcus
           erythropolis PR4]
          Length = 153

 Score = 84.7 bits (208), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 51/137 (37%), Positives = 75/137 (54%), Gaps = 2/137 (1%)

Query: 15  AQNAALRNEIPVGAVAVLNNKI-ISRAGNRNRELKDVTAHAEILAIRMGCRILSQEI-LP 72
           A  +A   ++PVGAV    + + ++RA N      D TAHAEILA+R   +I      L 
Sbjct: 16  AARSASDADVPVGAVVFDADGVEVARAANAREAASDPTAHAEILALRAAAKIYGDGWRLE 75

Query: 73  EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGI 132
              L VTLEPCTMCA A+ LAR+ R+ +GA  PK G + +           + P++  G+
Sbjct: 76  GATLAVTLEPCTMCAGALVLARVSRVVFGAWEPKTGAVGSLWDVVRDKRLTYRPQVRGGV 135

Query: 133 SEQRSRQIIQDFFKERR 149
            E     +++DFF+E+R
Sbjct: 136 LEDECAGLLEDFFREQR 152


>gi|332528366|ref|ZP_08404366.1| CMP/dCMP deaminase [Hylemonella gracilis ATCC 19624]
 gi|332042237|gb|EGI78563.1| CMP/dCMP deaminase [Hylemonella gracilis ATCC 19624]
          Length = 375

 Score = 84.7 bits (208), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 47/128 (36%), Positives = 71/128 (55%), Gaps = 6/128 (4%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNN------KIISRAGNRNRELKDVTAHAEILAIR 60
           +M  AL++A  AA   E+PVGAV V  +      ++++ A N      D TAHAE+ A+R
Sbjct: 7   YMRMALDQAYRAAQAGEVPVGAVLVHQDPHGGADRVLATAHNTPIADHDPTAHAEMQALR 66

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
               +L    L +  LYVTLEPC MCA A+  AR++R+ YGA++PK G   +    +   
Sbjct: 67  AAGSVLGNYRLDDCTLYVTLEPCPMCAGAMLHARLKRVVYGAADPKTGAAGSVLDLFAHR 126

Query: 121 TCHHSPEI 128
             +H  ++
Sbjct: 127 QLNHQTQV 134


>gi|262276797|ref|ZP_06054590.1| tRNA-specific adenosine deaminase [alpha proteobacterium HIMB114]
 gi|262223900|gb|EEY74359.1| tRNA-specific adenosine deaminase [alpha proteobacterium HIMB114]
          Length = 158

 Score = 84.7 bits (208), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 41/133 (30%), Positives = 74/133 (55%), Gaps = 2/133 (1%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
           N       +++  A  + E+P+ A+     NN+I+S++ N+N +  +  +HAEI++I   
Sbjct: 12  NYIFDILYQQSIKAQKKKEVPISALIFDPKNNRIVSKSHNQNIQDYNPCSHAEIISIIKA 71

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
           C  L++  L  +DLY +LEPC MC++ I  ++IRR+Y+   + K G + N  +       
Sbjct: 72  CNKLNKNRLDGMDLYCSLEPCLMCSSVIFQSKIRRVYFATDDKKNGALINNYKLGLKKNL 131

Query: 123 HHSPEIYPGISEQ 135
           +H  +IY G  E+
Sbjct: 132 NHRIDIYYGFQEE 144


>gi|293605714|ref|ZP_06688091.1| cytidine/deoxycytidylate deaminase [Achromobacter piechaudii ATCC
           43553]
 gi|292815893|gb|EFF74997.1| cytidine/deoxycytidylate deaminase [Achromobacter piechaudii ATCC
           43553]
          Length = 169

 Score = 84.7 bits (208), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 49/127 (38%), Positives = 71/127 (55%), Gaps = 1/127 (0%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           ++  AL+EAQ A    E+PVGA+ V    +I+ R  NR     D TAHAEI+A+R   R 
Sbjct: 20  YIELALQEAQAAYEIGEVPVGALVVSAQGEILGRGYNRTIIDHDPTAHAEIVALRNAARR 79

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           L    LP + +YVTLEPC MC  A+  AR+ R+ +GA +PK G   +     ++   +H 
Sbjct: 80  LENYRLPGITVYVTLEPCVMCIGAMLHARLARVVFGAYDPKTGACGSVLDVGSVPKLNHH 139

Query: 126 PEIYPGI 132
             +  G+
Sbjct: 140 TSVTGGV 146


>gi|28198227|ref|NP_778541.1| cytosine deaminase [Xylella fastidiosa Temecula1]
 gi|170729545|ref|YP_001774978.1| cytosine deaminase [Xylella fastidiosa M12]
 gi|182680863|ref|YP_001829023.1| CMP/dCMP deaminase zinc-binding [Xylella fastidiosa M23]
 gi|28056297|gb|AAO28190.1| cytosine deaminase [Xylella fastidiosa Temecula1]
 gi|167964338|gb|ACA11348.1| cytosine deaminase [Xylella fastidiosa M12]
 gi|182630973|gb|ACB91749.1| CMP/dCMP deaminase zinc-binding [Xylella fastidiosa M23]
          Length = 165

 Score = 84.3 bits (207), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 52/145 (35%), Positives = 75/145 (51%), Gaps = 2/145 (1%)

Query: 7   FMSCALEEAQNAALR-NEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           +M  AL  A  AA   +EIPVGAV +     ++    N N    D +AHAEI+A+R    
Sbjct: 14  WMRHALTLAHRAATEFDEIPVGAVLISPEGTLLGEGCNYNITSHDPSAHAEIMALRAAGH 73

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
            L    +P   LYVTLEPC MCA AI  ARI  L Y A++PK G   +          +H
Sbjct: 74  QLRNHRMPGCTLYVTLEPCLMCAMAIIHARIAHLIYAAADPKTGACGSTFDILNDPRHNH 133

Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149
              +Y G+  + + + + ++F+ +R
Sbjct: 134 HVHVYGGLLAEEASRRLTNYFRTKR 158


>gi|260654860|ref|ZP_05860348.1| tRNA-specific adenosine deaminase [Jonquetella anthropi E3_33 E1]
 gi|260630362|gb|EEX48556.1| tRNA-specific adenosine deaminase [Jonquetella anthropi E3_33 E1]
          Length = 166

 Score = 84.3 bits (207), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 52/140 (37%), Positives = 70/140 (50%), Gaps = 1/140 (0%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
            M  AL EA+ A    E+PVGAV V     II R  N    L D TAHAEI+A+R   + 
Sbjct: 1   MMEQALCEARRAFAGGEVPVGAVVVDEKGNIIGRGYNLRAALHDPTAHAEIVALREAAQA 60

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           L    L    L+VTLEPC MCA A+  ARI R+ +G  + + G   +          +H 
Sbjct: 61  LGGWNLSGCSLFVTLEPCPMCAGALVQARIARVVFGCRDERAGACGSLYSILRDGRLNHR 120

Query: 126 PEIYPGISEQRSRQIIQDFF 145
            ++  G+     R ++Q FF
Sbjct: 121 CDVAEGLMADECRSLLQSFF 140


>gi|255326091|ref|ZP_05367178.1| tRNA-specific adenosine deaminase [Rothia mucilaginosa ATCC 25296]
 gi|255296802|gb|EET76132.1| tRNA-specific adenosine deaminase [Rothia mucilaginosa ATCC 25296]
          Length = 158

 Score = 84.3 bits (207), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 50/130 (38%), Positives = 64/130 (49%), Gaps = 1/130 (0%)

Query: 21  RNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVT 79
           R EIP+GAV V     II  AGN      D +AHAE+ AIR       Q  L    L VT
Sbjct: 28  RGEIPIGAVVVDEQGAIIGSAGNTREREHDPSAHAEVNAIRQAAAHRGQWRLDGCTLVVT 87

Query: 80  LEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139
           +EPC MCA  I  +R+  + +GA   K G   +            +PE+Y G+      Q
Sbjct: 88  VEPCLMCAGTILASRVSTVVFGAWEEKTGAAGSRYDVLRDGRVAPAPEVYAGVRADECAQ 147

Query: 140 IIQDFFKERR 149
           ++ DFFKERR
Sbjct: 148 LMVDFFKERR 157


>gi|30248454|ref|NP_840524.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Nitrosomonas europaea ATCC 19718]
 gi|30138340|emb|CAD84348.1| Cytidine and deoxycytidylate deaminase zinc-binding region
           [Nitrosomonas europaea ATCC 19718]
          Length = 167

 Score = 84.3 bits (207), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 52/143 (36%), Positives = 72/143 (50%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  AL+ A+ A    E+PVGAV V  ++I+    N      D TAHAEI A+R     +
Sbjct: 17  FMRQALDLARVAGAAGEVPVGAVMVRESRIVGCGHNCPVTTVDPTAHAEIRALRDAASRV 76

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               LP   LYVTLEPC MC  A+  ARI RL Y A++PK G   +          +H  
Sbjct: 77  GNYRLPGCTLYVTLEPCVMCIGAMFHARITRLVYAANDPKTGVCGSLLDLPADTRLNHHL 136

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
            +  G+    +  +++ FF  +R
Sbjct: 137 MVSQGVLADEAGTLLKQFFIAKR 159


>gi|302379537|ref|ZP_07268022.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Finegoldia magna ACS-171-V-Col3]
 gi|302312444|gb|EFK94440.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Finegoldia magna ACS-171-V-Col3]
          Length = 155

 Score = 84.0 bits (206), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 48/143 (33%), Positives = 77/143 (53%), Gaps = 1/143 (0%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  A+E+A+ A   +E+PVG V V N +II++A N      + T HAE+ AI    +++
Sbjct: 8   FMIKAIEQAKIAFDLDEVPVGCVIVKNGEIIAQAYNSVETDNNATMHAELKAINQATKVI 67

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  +YVTLEPC MC  A+  +RI ++ +GA + K G   +          +H  
Sbjct: 68  GNFRLDDCTMYVTLEPCVMCTGALVYSRIPKVVFGAFDKKRGACGSLISLNDYEGLNHKI 127

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+   I E+   +++Q FF+  R
Sbjct: 128 EV-KSIMEKECVELMQSFFRRIR 149


>gi|238026935|ref|YP_002911166.1| CMP/dCMP deaminase, zinc-binding [Burkholderia glumae BGR1]
 gi|237876129|gb|ACR28462.1| CMP/dCMP deaminase, zinc-binding [Burkholderia glumae BGR1]
          Length = 202

 Score = 84.0 bits (206), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 48/102 (47%), Positives = 61/102 (59%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  AL  A  A    E+PVGAV V  +++I+R  N      D +AHAE+ A+R     L
Sbjct: 35  FMRLALAAADAARAAGEVPVGAVLVRGDQVIARGFNHPISGHDPSAHAEMAALREAAHTL 94

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGG 108
               LP  +LYVTLEPC MC+ AI  ARI R+ YGA++PK G
Sbjct: 95  GNYRLPGCELYVTLEPCLMCSGAIMHARIARVVYGAADPKTG 136


>gi|325092201|gb|EGC45511.1| tRNA specific adenosine deaminase [Ajellomyces capsulatus H88]
          Length = 197

 Score = 84.0 bits (206), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 48/129 (37%), Positives = 66/129 (51%), Gaps = 6/129 (4%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           +K   FM  AL+  + A    E PVG V V N+++I    N   +  + T HAE LAI  
Sbjct: 15  QKHEYFMKKALDMGEEALASGETPVGCVLVHNDEVIGSGMNDTNKSMNGTRHAEFLAIEE 74

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
             R   + I  E DLYVT+EPC MCA+A+   +IR +Y+G +N + GG         +  
Sbjct: 75  VLRNYPRSIFRETDLYVTVEPCIMCASALRQYQIRHVYFGCANERFGGTGG------VLN 128

Query: 122 CHHSPEIYP 130
            H  P I P
Sbjct: 129 LHSDPGIDP 137


>gi|222110787|ref|YP_002553051.1| cmp/dcmp deaminase zinc-binding [Acidovorax ebreus TPSY]
 gi|221730231|gb|ACM33051.1| CMP/dCMP deaminase zinc-binding [Acidovorax ebreus TPSY]
          Length = 361

 Score = 84.0 bits (206), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 45/126 (35%), Positives = 67/126 (53%)

Query: 22  NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81
            E+PVGAV V + ++I+   N      D TAHAE+ A+R G   LS   L    LYVTLE
Sbjct: 24  GEVPVGAVLVRDGQVIATGRNAPIAGHDPTAHAEMAALRAGAAQLSNYRLDGCTLYVTLE 83

Query: 82  PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141
           PC MC+ A+  AR+ R+ YGA++ K G   +    +     +H   +  G+       ++
Sbjct: 84  PCAMCSGAMLHARLPRVVYGAADAKTGAAGSVVNLFAEPRLNHQTAVQGGVLADECGALL 143

Query: 142 QDFFKE 147
            DFF++
Sbjct: 144 SDFFRD 149


>gi|121594624|ref|YP_986520.1| CMP/dCMP deaminase [Acidovorax sp. JS42]
 gi|120606704|gb|ABM42444.1| CMP/dCMP deaminase, zinc-binding protein [Acidovorax sp. JS42]
          Length = 361

 Score = 84.0 bits (206), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 45/126 (35%), Positives = 67/126 (53%)

Query: 22  NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81
            E+PVGAV V + ++I+   N      D TAHAE+ A+R G   LS   L    LYVTLE
Sbjct: 24  GEVPVGAVLVRDGQVIATGRNAPIAGHDPTAHAEMAALRAGAAQLSNYRLDGCTLYVTLE 83

Query: 82  PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141
           PC MC+ A+  AR+ R+ YGA++ K G   +    +     +H   +  G+       ++
Sbjct: 84  PCAMCSGAMLHARLPRVVYGAADAKTGAAGSVVNLFAEPRLNHQTAVQGGVLADECGALL 143

Query: 142 QDFFKE 147
            DFF++
Sbjct: 144 SDFFRD 149


>gi|71902073|ref|ZP_00684112.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [Xylella
           fastidiosa Ann-1]
 gi|71728165|gb|EAO30357.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [Xylella
           fastidiosa Ann-1]
          Length = 203

 Score = 84.0 bits (206), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 52/145 (35%), Positives = 75/145 (51%), Gaps = 2/145 (1%)

Query: 7   FMSCALEEAQNAALR-NEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           +M  AL  A  AA   +EIPVGAV +     ++    N N    D +AHAEI+A+R    
Sbjct: 52  WMRHALTLAHRAATEFDEIPVGAVLISPEGTLLGEGCNYNITSHDPSAHAEIMALRAAGH 111

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
            L    +P   LYVTLEPC MCA AI  ARI  L Y A++PK G   +          +H
Sbjct: 112 QLRNHRMPGCTLYVTLEPCLMCAMAIIHARIAHLIYAATDPKTGACGSTFDILNDPRHNH 171

Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149
              +Y G+  + + + + ++F+ +R
Sbjct: 172 HVHVYGGLLAEEASRRLTNYFRTKR 196


>gi|225681358|gb|EEH19642.1| tRNA-specific adenosine deaminase subunit TAD2 [Paracoccidioides
           brasiliensis Pb03]
          Length = 197

 Score = 84.0 bits (206), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 48/143 (33%), Positives = 72/143 (50%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
           K   FM  AL+  + A    E PVG V V N +II    N   +  + T HAE LA+   
Sbjct: 16  KHEYFMRKALDMGEEALASGETPVGCVLVHNEEIIGSGMNDTNKSMNGTRHAEFLAVEEV 75

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
            R   + I  E DLYVT+EPC MCA+A+   RIR +Y+G +N + GG       ++    
Sbjct: 76  LRSHPRSIFHETDLYVTVEPCIMCASALRQYRIRHVYFGCANERFGGTGGVLNLHSDPGI 135

Query: 123 HHSPEIYPGISEQRSRQIIQDFF 145
               E+  G+  + +  +++ F+
Sbjct: 136 DPPYELTGGLFRKEAIMLLRRFY 158


>gi|182437330|ref|YP_001825049.1| putative deaminase [Streptomyces griseus subsp. griseus NBRC 13350]
 gi|326777951|ref|ZP_08237216.1| CMP/dCMP deaminase zinc-binding [Streptomyces cf. griseus
           XylebKG-1]
 gi|178465846|dbj|BAG20366.1| putative deaminase [Streptomyces griseus subsp. griseus NBRC 13350]
 gi|326658284|gb|EGE43130.1| CMP/dCMP deaminase zinc-binding [Streptomyces cf. griseus
           XylebKG-1]
          Length = 142

 Score = 84.0 bits (206), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 52/140 (37%), Positives = 72/140 (51%), Gaps = 1/140 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  AL EA  AA   ++PVGAV +  +   ++ A N      D TAHAEILA+R      
Sbjct: 1   MRRALAEAGRAASAGDVPVGAVVLGPDGTGLATAHNEREATGDPTAHAEILALRRAAEAH 60

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
            +  L    L VTLEPCTMCA A+  +RI R+ YGA + K G   +          +H P
Sbjct: 61  GEWRLTGCTLVVTLEPCTMCAGALVQSRIARVVYGARDEKAGAAGSLWDVVRDRRLNHRP 120

Query: 127 EIYPGISEQRSRQIIQDFFK 146
           E+  G+ E+   + +  FF+
Sbjct: 121 EVIAGVLERECAEQLTAFFR 140


>gi|254568360|ref|XP_002491290.1| Subunit of tRNA-specific adenosine-34 deaminase [Pichia pastoris
           GS115]
 gi|238031087|emb|CAY69010.1| Subunit of tRNA-specific adenosine-34 deaminase [Pichia pastoris
           GS115]
 gi|328352193|emb|CCA38592.1| hypothetical protein PP7435_Chr2-0910 [Pichia pastoris CBS 7435]
          Length = 220

 Score = 84.0 bits (206), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 54/154 (35%), Positives = 82/154 (53%), Gaps = 24/154 (15%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  AL+ AQ A    E+P+G + V  NKII++  N+         HAE+ AI     I+
Sbjct: 9   FMKKALDAAQIALDELEVPIGCIFVYKNKIIAQGSNKTNATSCGINHAEMEAID---EII 65

Query: 67  SQ-----EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
           ++     EILP  DLYVT+EPC MCA+A+    IRR+++G +N + GG  NG    ++ T
Sbjct: 66  AKYPNYKEILPFADLYVTVEPCIMCASALRQLGIRRVFFGCANDRFGG--NG----SVLT 119

Query: 122 CHHSP----------EIYPGISEQRSRQIIQDFF 145
            H              +YPGI  + +  +++ F+
Sbjct: 120 IHSDKLNNKLDSSIYPVYPGIYAKEAVTLLRKFY 153


>gi|15828339|ref|NP_302602.1| cytidine/deoxycytidylate deaminase [Mycobacterium leprae TN]
 gi|221230816|ref|YP_002504232.1| putative cytidine/deoxycytidylate deaminase [Mycobacterium leprae
           Br4923]
 gi|13094032|emb|CAC31991.1| possible cytidine/deoxycytidylate deaminase [Mycobacterium leprae]
 gi|219933923|emb|CAR72573.1| possible cytidine/deoxycytidylate deaminase [Mycobacterium leprae
           Br4923]
          Length = 171

 Score = 84.0 bits (206), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 53/145 (36%), Positives = 74/145 (51%), Gaps = 3/145 (2%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
            +  AL  A  A  R+ +P+GAV +  +   ++RA N    + D TAHAEILA+R     
Sbjct: 20  LIRAALTVATTAGSRD-VPIGAVVLGADGNELARAVNAREAIGDPTAHAEILAMRAAAGT 78

Query: 66  LSQEI-LPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
           L     L    L VT+EPCTMCA A+ LARI RL +GA  PK G + +          +H
Sbjct: 79  LGNGWRLEGTTLAVTVEPCTMCAGALVLARIERLVFGAWQPKTGAVGSLWDVVRDHRLNH 138

Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149
            P +  G+  Q     ++ FF  +R
Sbjct: 139 RPAVRGGVLAQECTAPLEAFFAHQR 163


>gi|328954698|ref|YP_004372031.1| tRNA-adenosine deaminase [Coriobacterium glomerans PW2]
 gi|328455022|gb|AEB06216.1| tRNA-adenosine deaminase [Coriobacterium glomerans PW2]
          Length = 165

 Score = 84.0 bits (206), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 48/143 (33%), Positives = 73/143 (51%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  AL +A+ AA   E+P+GA  V     I+RA NR     + +AHAE +A+     +L
Sbjct: 18  FMREALAQARMAAELGEVPIGAAVVYEGDCIARAHNRRELDGNPSAHAEFVAMLKASAVL 77

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
            +  L    +YVT+EPC MCA  +  ARI R  +GAS+PKGG +            +H+ 
Sbjct: 78  GRWRLTGCTVYVTVEPCLMCAGLMVNARIDRCVFGASDPKGGALGTLFDVSRDPRLNHAF 137

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
            +   +  +    ++  FF + R
Sbjct: 138 GVTRDVEREECSDLLTTFFADLR 160


>gi|332704280|ref|ZP_08424368.1| CMP/dCMP deaminase, zinc-binding protein [Desulfovibrio africanus
           str. Walvis Bay]
 gi|332554429|gb|EGJ51473.1| CMP/dCMP deaminase, zinc-binding protein [Desulfovibrio africanus
           str. Walvis Bay]
          Length = 174

 Score = 83.6 bits (205), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 53/144 (36%), Positives = 74/144 (51%), Gaps = 3/144 (2%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLN--NKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M  AL +A  A    E+PVGA A+L+    ++++A N    L D TAHAE+L +R G   
Sbjct: 23  MDVALRQAHEAGSMGEVPVGA-ALLSAEGSLLAQAHNAPLSLNDPTAHAEMLCLRQGAST 81

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           L    L    L VTLEPC MC  A+  ARI  L  GA +PK G + +  +   L   +H 
Sbjct: 82  LGNYRLTGCILAVTLEPCIMCLGALVHARIAGLVIGARDPKAGAVLSRLKGLRLPFLNHQ 141

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
             +  GI  +   +++  FF  RR
Sbjct: 142 FWVLEGIMAEDCGKLLSSFFLRRR 165


>gi|71892310|ref|YP_278044.1| tRNA-specific adenosine deaminase [Candidatus Blochmannia
           pennsylvanicus str. BPEN]
 gi|71796416|gb|AAZ41167.1| tRNA-specific adenosine deaminase [Candidatus Blochmannia
           pennsylvanicus str. BPEN]
          Length = 155

 Score = 83.6 bits (205), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 54/147 (36%), Positives = 77/147 (52%), Gaps = 6/147 (4%)

Query: 6   VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           ++M  A+  A +A +  EI VGAV + N K+IS   N +    D +AHAEI+A+R G ++
Sbjct: 10  IWMRHAIALAAHAEIIGEISVGAVLIQNGKLISYGWNSSIICHDPSAHAEIVALRTGGKV 69

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKG---GGIENGTQFYTLATC 122
           L    L    LYVTLEPC MC  AI  AR+ RL  GA N K      ++N  +       
Sbjct: 70  LGNYRLLGTTLYVTLEPCMMCIGAIIHARVYRLVCGAKNSKTEQRSWLKNTLRH---PMN 126

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H   +  G+ E+     +  FFK +R
Sbjct: 127 NHHVFLTTGVLEKECAYQLNKFFKRQR 153


>gi|311897119|dbj|BAJ29527.1| putative deaminase [Kitasatospora setae KM-6054]
          Length = 179

 Score = 83.6 bits (205), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 49/143 (34%), Positives = 72/143 (50%), Gaps = 1/143 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  A+EEA  A    ++PVGA  +  +  ++ R  N    + D T HAE++AIR     +
Sbjct: 37  MRLAIEEAALATATGDVPVGAFVLGPDGTVLGRGHNVREAVGDPTGHAEVVAIRAAAAEV 96

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
            +  L    L VTLEPCTMCA AI L+R+ R+ +GA +PK G   +          +H P
Sbjct: 97  GEWRLSGCTLVVTLEPCTMCAGAIVLSRLARVVFGAYDPKAGAAGSLFDVVRDNRLNHRP 156

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+  G+        +  FF  +R
Sbjct: 157 EVIGGVLADACTAQLLAFFDTQR 179


>gi|242794450|ref|XP_002482376.1| cytosine deaminase, putative [Talaromyces stipitatus ATCC 10500]
 gi|218718964|gb|EED18384.1| cytosine deaminase, putative [Talaromyces stipitatus ATCC 10500]
          Length = 186

 Score = 83.6 bits (205), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 48/139 (34%), Positives = 71/139 (51%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  AL   + A    E PVG V VLN KII    N      + T HAE LAI    +  
Sbjct: 22  FMKEALLMGEKALAVGETPVGCVLVLNGKIIGSGMNDTNRSMNGTRHAEFLAIEEALQTY 81

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
            + I  EVDLYVT+EPC MCA+ +    I R+++G +N + GG  +    ++  +     
Sbjct: 82  PRSIFREVDLYVTVEPCVMCASLLRQYNICRVFFGCANERFGGTGSVLSLHSDPSIDPPY 141

Query: 127 EIYPGISEQRSRQIIQDFF 145
            +Y GI +  +  +++ F+
Sbjct: 142 PVYGGIFKNDAIMLLRRFY 160


>gi|33862872|ref|NP_894432.1| putative cytidine/deoxycytidylate deaminase [Prochlorococcus
           marinus str. MIT 9313]
 gi|33634788|emb|CAE20774.1| putative cytidine/deoxycytidylate deaminase [Prochlorococcus
           marinus str. MIT 9313]
          Length = 163

 Score = 83.6 bits (205), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 44/144 (30%), Positives = 75/144 (52%), Gaps = 1/144 (0%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           +M   L  A+      E+PV AV +  + + I    N+    +D   HAE++A+R    +
Sbjct: 6   WMLRLLTRAKQLGDFGEVPVSAVVLDADGRCIGHGSNQRHRRRDPLGHAELIALRQAAWL 65

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
            S     +  L VTLEPC MCA A++ AR+ ++ + A +PK GG+ +        + HH 
Sbjct: 66  RSDWRFNDCTLIVTLEPCPMCAGALTQARMGQVIFAAHDPKRGGLGSTIHLGEHPSAHHK 125

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
             +  G+ E  +RQ ++ +FK++R
Sbjct: 126 MRVLGGVMEVEARQQLEAWFKQQR 149


>gi|325962140|ref|YP_004240046.1| tRNA-adenosine deaminase [Arthrobacter phenanthrenivorans Sphe3]
 gi|323468227|gb|ADX71912.1| tRNA-adenosine deaminase [Arthrobacter phenanthrenivorans Sphe3]
          Length = 157

 Score = 83.6 bits (205), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 53/141 (37%), Positives = 75/141 (53%), Gaps = 16/141 (11%)

Query: 23  EIPVGAVAVLNNKIISRAG-NRNRELKDVTAHAEILAIRMGCRILSQ-----------EI 70
           ++P+GAV +  +  +  +G N+  EL D TAHAE++AIR     L Q             
Sbjct: 16  DVPIGAVVIGPDGAVLGSGRNQREELGDPTAHAEVVAIREAAERLRQLSLNGGGRGDGWR 75

Query: 71  LPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT--CHHSPEI 128
           L +  L VTLEPC MCA AI LARI R+ +GA + K G    G+ F  L     +H  E+
Sbjct: 76  LSDCTLIVTLEPCAMCAGAIVLARIPRVVFGAWDEKAGA--AGSVFDVLRERRLNHWVEV 133

Query: 129 YPGISEQRSRQIIQDFFKERR 149
           YPG+ E     ++++FF   R
Sbjct: 134 YPGVREAECAALLREFFAGHR 154


>gi|320334320|ref|YP_004171031.1| tRNA(Ile)-lysidine synthase [Deinococcus maricopensis DSM 21211]
 gi|319755609|gb|ADV67366.1| tRNA(Ile)-lysidine synthase [Deinococcus maricopensis DSM 21211]
          Length = 529

 Score = 83.6 bits (205), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 52/146 (35%), Positives = 75/146 (51%), Gaps = 2/146 (1%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
           +V M  AL  A+ A    E+PVGAV    + ++++RA N  R   D+T HAE+ A+R   
Sbjct: 383 HVAMGEALAAAREAFGNAEVPVGAVITGPDGQVVARAANTARAHGDMTRHAELDALRAAA 442

Query: 64  RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123
             L    L    LYVTLEPC MC  A   AR+ R+ +GA NPK G +   T     A   
Sbjct: 443 ATLGTAYLTGCTLYVTLEPCPMCLGAALEARVSRIVFGARNPKLGALGGVTDVLAYA-WG 501

Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149
           H P++  G+  + +  ++   F+  R
Sbjct: 502 HRPDVQGGVRAREASALLTGAFRTYR 527


>gi|308235514|ref|ZP_07666251.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Gardnerella vaginalis ATCC 14018]
 gi|311114084|ref|YP_003985305.1| putative cytosine deaminase [Gardnerella vaginalis ATCC 14019]
 gi|310945578|gb|ADP38282.1| possible cytosine deaminase [Gardnerella vaginalis ATCC 14019]
          Length = 154

 Score = 83.6 bits (205), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 55/146 (37%), Positives = 73/146 (50%), Gaps = 5/146 (3%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNK-IISRAGNRNRELKDVTAHAEILAIRMGCRI 65
            M  AL  AQ A+   E+PVGAV V  +  II R  N      D  +HAE+LAI+     
Sbjct: 11  LMQEALRLAQVASDCGEVPVGAVVVDGSGVIIGRGSNLRERDSDPLSHAEVLAIKQAAES 70

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH-- 123
                L +  L VTLEPC MCA AI    I+R+ +GA + K G    G+ +  L   H  
Sbjct: 71  KKSWNLSDCTLVVTLEPCPMCAGAILQTHIKRVVFGAWDSKLGAC--GSVWDILRDPHVG 128

Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149
             P+++  + E    QI+ DFFK  R
Sbjct: 129 SHPQVFGSVCESECVQILSDFFKNCR 154


>gi|71275637|ref|ZP_00651922.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [Xylella
           fastidiosa Dixon]
 gi|71897819|ref|ZP_00680045.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [Xylella
           fastidiosa Ann-1]
 gi|71163528|gb|EAO13245.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [Xylella
           fastidiosa Dixon]
 gi|71732374|gb|EAO34428.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [Xylella
           fastidiosa Ann-1]
          Length = 203

 Score = 83.6 bits (205), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 52/145 (35%), Positives = 75/145 (51%), Gaps = 2/145 (1%)

Query: 7   FMSCALEEAQNAALR-NEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           +M  AL  A  AA   +EIPVGAV +     ++    N N    D +AHAEI+A+R    
Sbjct: 52  WMRHALTLAHRAATEFDEIPVGAVLISPEGTLLGEGCNYNITSHDPSAHAEIMALRAAGH 111

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
            L    +P   LYVTLEPC MCA AI  ARI  L Y A++PK G   +          +H
Sbjct: 112 QLRNHRMPGCTLYVTLEPCLMCAMAIIHARIAHLIYAAADPKTGACGSTFDILNDPRHNH 171

Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149
              +Y G+  + + + + ++F+ +R
Sbjct: 172 HVHVYGGLLAEEASRRLTNYFRTKR 196


>gi|242018582|ref|XP_002429753.1| tRNA-specific adenosine deaminase subunit TAD2, putative [Pediculus
           humanus corporis]
 gi|212514765|gb|EEB17015.1| tRNA-specific adenosine deaminase subunit TAD2, putative [Pediculus
           humanus corporis]
          Length = 188

 Score = 83.6 bits (205), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 48/149 (32%), Positives = 83/149 (55%), Gaps = 13/149 (8%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAE---ILAIRMGC 63
           +M  AL  A+NA   NE+PVG + V +N+II+   N   E K+ T HAE   I  +   C
Sbjct: 16  WMKIALGFAENALKNNEVPVGCIFVYDNEIIANGANTVNETKNATRHAEMNCIDTVLSWC 75

Query: 64  R---ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG---IENGTQFY 117
           +   +   E+   +D+ VT+EPC MC+AA+   +++R+ YG  N + GG   + + ++ Y
Sbjct: 76  KERNLNFTEVFKAMDVVVTVEPCIMCSAALFELKVKRITYGCKNYRFGGCSTVFDISKIY 135

Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDFFK 146
             + C     +  G+ ++ S  +++DF+K
Sbjct: 136 RNSNC----VMVGGVYDEESINLLKDFYK 160


>gi|238021048|ref|ZP_04601474.1| hypothetical protein GCWU000324_00945 [Kingella oralis ATCC 51147]
 gi|237868028|gb|EEP69034.1| hypothetical protein GCWU000324_00945 [Kingella oralis ATCC 51147]
          Length = 238

 Score = 83.2 bits (204), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 45/127 (35%), Positives = 71/127 (55%)

Query: 23  EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEP 82
           E+PVGAV V   +II++A NR      ++ HAEI A+    ++L    L E D+YV+LEP
Sbjct: 112 EVPVGAVVVHRGEIIAQAHNRCVADCSISHHAEIQALAAAGQVLGNYRLNECDVYVSLEP 171

Query: 83  CTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQ 142
           C MCA+A+  AR+ R+ + A  PK G   +    ++    +    +  G+    ++Q +Q
Sbjct: 172 CAMCASAMIQARVARVVFAAHEPKTGAAGSVLNLFSNNQLNQHTAMLGGLLADEAKQQLQ 231

Query: 143 DFFKERR 149
            FF+ RR
Sbjct: 232 AFFRLRR 238


>gi|307579329|gb|ADN63298.1| CMP/dCMP deaminase zinc-binding protein [Xylella fastidiosa subsp.
           fastidiosa GB514]
          Length = 151

 Score = 83.2 bits (204), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 52/144 (36%), Positives = 74/144 (51%), Gaps = 2/144 (1%)

Query: 8   MSCALEEAQNAALR-NEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M  AL  A  AA   +EIPVGAV +     ++    N N    D +AHAEI+A+R     
Sbjct: 1   MRHALTLAHRAATEFDEIPVGAVLISPEGTLLGEGCNYNITSHDPSAHAEIMALRAAGHQ 60

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           L    +P   LYVTLEPC MCA AI  ARI  L Y A++PK G   +          +H 
Sbjct: 61  LRNHRMPGCTLYVTLEPCLMCAMAIIHARIAHLIYAAADPKTGACGSTFDILNDPRHNHH 120

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
             +Y G+  + + + + ++F+ +R
Sbjct: 121 VHVYGGLLAEEASRRLTNYFRTKR 144


>gi|310657385|ref|YP_003935106.1| guanine deaminase [Clostridium sticklandii DSM 519]
 gi|308824163|emb|CBH20201.1| guanine deaminase [Clostridium sticklandii]
          Length = 154

 Score = 83.2 bits (204), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 50/123 (40%), Positives = 69/123 (56%), Gaps = 2/123 (1%)

Query: 7   FMSCALEEA-QNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           FM  A++EA +   LR   P GAV V +NK+I+R  N+  E  D TAHAEI+AIR   ++
Sbjct: 4   FMKEAIKEAFEGIGLRAGGPFGAVIVKDNKVIARGHNKVIETNDPTAHAEIVAIREATKL 63

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIE-NGTQFYTLATCHH 124
           L +  L +  LY T EPC MC +A   A+I  +YYGA+      I  + +  Y +    H
Sbjct: 64  LGRFDLSDCILYTTCEPCPMCYSAAHWAKIPLIYYGATQDDAKDIGFDDSYIYEVLQNKH 123

Query: 125 SPE 127
           S E
Sbjct: 124 SNE 126


>gi|169824845|ref|YP_001692456.1| putative deaminase [Finegoldia magna ATCC 29328]
 gi|167831650|dbj|BAG08566.1| putative deaminase [Finegoldia magna ATCC 29328]
          Length = 155

 Score = 83.2 bits (204), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 48/143 (33%), Positives = 77/143 (53%), Gaps = 1/143 (0%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  A+E+A+ A   +E+PVG V V N +II++A N      + T HAE+ AI    +++
Sbjct: 8   FMIKAIEQARIAFDMDEVPVGCVIVKNGEIIAQAYNSVETDNNATMHAELKAINQATQVI 67

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  +YVTLEPC MC  A+  +RI ++ +GA + K G   +          +H  
Sbjct: 68  GNFRLDDCTMYVTLEPCVMCTGALVYSRIPKVVFGAFDKKRGACGSLLSLNDYEGLNHKI 127

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+   I E+   +++Q FF+  R
Sbjct: 128 EV-KSIMEKECVELMQSFFRRIR 149


>gi|320102361|ref|YP_004177952.1| tRNA-adenosine deaminase [Isosphaera pallida ATCC 43644]
 gi|319749643|gb|ADV61403.1| tRNA-adenosine deaminase [Isosphaera pallida ATCC 43644]
          Length = 185

 Score = 83.2 bits (204), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 50/136 (36%), Positives = 77/136 (56%), Gaps = 3/136 (2%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLN--NKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M+ AL+ A+ A    E+PVGAV VL+   +++++A N    L+D TAHAE L +    R 
Sbjct: 24  MTRALDLARAAVDLGEVPVGAV-VLDPLGRLLAQAHNLRETLEDPTAHAERLVLTWAARG 82

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           L    L    LYVTLEPC MCA AI LAR+ R+ Y  ++PK G   +  +    +  +H 
Sbjct: 83  LGTWRLEGCTLYVTLEPCVMCAGAIVLARVARVVYATNDPKAGACSSLYRILDDSRLNHR 142

Query: 126 PEIYPGISEQRSRQII 141
           P++  G+  + +  ++
Sbjct: 143 PQVEYGLFAREAGDLL 158


>gi|297587228|ref|ZP_06945873.1| tRNA-specific adenosine deaminase [Finegoldia magna ATCC 53516]
 gi|297575209|gb|EFH93928.1| tRNA-specific adenosine deaminase [Finegoldia magna ATCC 53516]
          Length = 155

 Score = 83.2 bits (204), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 48/143 (33%), Positives = 77/143 (53%), Gaps = 1/143 (0%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  A+E+A+ A   +E+PVG V V + +II++A N   + K+ T HAE+ AI      +
Sbjct: 8   FMMKAIEQAKIAYDMDEVPVGCVIVKDGEIIAQAYNSVEKDKNATMHAELKAINQATEFI 67

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  +YVTLEPC MC  A+  +RI ++ +GA + K G   +          +H  
Sbjct: 68  GNFRLDDCIMYVTLEPCVMCTGALVYSRIPKVVFGAFDKKRGACGSLISLNDYEGLNHKI 127

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+   I E+   +++Q FF+  R
Sbjct: 128 EV-KSIMEKECVELMQSFFRRIR 149


>gi|295671881|ref|XP_002796487.1| tRNA-specific adenosine deaminase [Paracoccidioides brasiliensis
           Pb01]
 gi|226283467|gb|EEH39033.1| tRNA-specific adenosine deaminase [Paracoccidioides brasiliensis
           Pb01]
          Length = 197

 Score = 83.2 bits (204), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 47/143 (32%), Positives = 72/143 (50%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
           K   FM  AL+  + A    E PVG V V N +II    N   +  + T HAE LA+   
Sbjct: 16  KHEYFMRKALDMGEEALASGETPVGCVLVHNEEIIGSGMNDTNKSMNGTRHAEFLAVEEV 75

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
            R   + I  E DLYVT+EPC MCA+A+   RIR +++G +N + GG       ++    
Sbjct: 76  LRSYPRSIFHETDLYVTVEPCIMCASALRQYRIRHVFFGCANERFGGTGGVLNLHSDPGI 135

Query: 123 HHSPEIYPGISEQRSRQIIQDFF 145
               E+  G+  + +  +++ F+
Sbjct: 136 DPPYELTGGLFRKEAIMLLRRFY 158


>gi|124023348|ref|YP_001017655.1| cytidine/deoxycytidylate deaminase [Prochlorococcus marinus str.
           MIT 9303]
 gi|123963634|gb|ABM78390.1| putative cytidine/deoxycytidylate deaminase [Prochlorococcus
           marinus str. MIT 9303]
          Length = 163

 Score = 83.2 bits (204), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 44/144 (30%), Positives = 75/144 (52%), Gaps = 1/144 (0%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           +M   L  A+      E+PV AV +  + + I    N+    +D   HAE++A+R    +
Sbjct: 6   WMLRLLTRAKQLGGLGEVPVSAVVLDADGRCIGHGSNQRHRGRDPLGHAELIALRQAAWL 65

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
            S     +  L VTLEPC MCA A++ AR+ ++ + A +PK GG+ +        + HH 
Sbjct: 66  RSDWRFNDCTLIVTLEPCPMCAGALTQARMGQVIFAAHDPKRGGLGSTINLGDHPSAHHK 125

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
             +  G+ E  +RQ ++ +FK++R
Sbjct: 126 MRVLGGVMEVEARQQLEAWFKQQR 149


>gi|77917942|ref|YP_355757.1| putative deaminase [Pelobacter carbinolicus DSM 2380]
 gi|77544025|gb|ABA87587.1| tRNA-adenosine deaminase [Pelobacter carbinolicus DSM 2380]
          Length = 159

 Score = 83.2 bits (204), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 54/142 (38%), Positives = 72/142 (50%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  AL EA  AA   E+PVGAV V +  II R  N      D T HAE++AIR     + 
Sbjct: 1   MQEALVEASAAARLGEVPVGAVVVKDGMIIGRGHNLRETSNDPTTHAEMIAIRQAAAAID 60

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
              L    LYVTLEPC MC  AI LARI RL +G+ +P+ G + +          +H   
Sbjct: 61  SWRLIGCTLYVTLEPCVMCMGAIILARIPRLVFGSRDPRVGAVGSIFDLSRDERFNHQVA 120

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
           +  G+    S  ++  FF++ R
Sbjct: 121 VTEGVLALESSDMLSGFFRQLR 142


>gi|21355527|ref|NP_650610.1| CG5292 [Drosophila melanogaster]
 gi|7300237|gb|AAF55401.1| CG5292 [Drosophila melanogaster]
 gi|18447473|gb|AAL68299.1| RE41712p [Drosophila melanogaster]
 gi|220948458|gb|ACL86772.1| CG5292-PA [synthetic construct]
 gi|220960450|gb|ACL92761.1| CG5292-PA [synthetic construct]
          Length = 160

 Score = 83.2 bits (204), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 49/146 (33%), Positives = 78/146 (53%), Gaps = 9/146 (6%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEIL---AIRMGC 63
           FM  AL EA+ A    E+PVG V V  +K+++R GN     ++ T HAE +   AI   C
Sbjct: 4   FMEEALVEARRARDAGEVPVGCVFVHGDKVVARGGNEVNVHRNATRHAEFICIDAILASC 63

Query: 64  R---ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
           R   + ++++  E+ + VT+EPC MC+AA+    ++ + YG  N + GG    T     A
Sbjct: 64  RERRLPARQLFSEITVVVTVEPCIMCSAALHTLGVKEIIYGCENDRFGG---KTVVDVAA 120

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFK 146
              H  EI  G+    +  +++DF+K
Sbjct: 121 VVGHRIEITGGVRADEAMALLKDFYK 146


>gi|325917446|ref|ZP_08179655.1| tRNA-adenosine deaminase [Xanthomonas vesicatoria ATCC 35937]
 gi|325536320|gb|EGD08107.1| tRNA-adenosine deaminase [Xanthomonas vesicatoria ATCC 35937]
          Length = 171

 Score = 83.2 bits (204), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 55/147 (37%), Positives = 82/147 (55%), Gaps = 6/147 (4%)

Query: 7   FMSCALEEAQNAALR-NEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           +M  AL+ A+ A    +EIPVGAV +    +++    N N    D +AHAEI+A+R G R
Sbjct: 20  WMQHALQLAERAERDYDEIPVGAVLIDAEGQVLGEGWNYNIASHDPSAHAEIMAMREGGR 79

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
            L+   L    LYVTLEPC MCA A+  ARI R+ + AS+PK G    G+ F  LA   H
Sbjct: 80  RLANHRLIGCTLYVTLEPCAMCAMAMIHARIARVVFAASDPKTGAC--GSVFDLLADPRH 137

Query: 125 SPEIY--PGISEQRSRQIIQDFFKERR 149
           +  ++   G+    +   + ++F+ +R
Sbjct: 138 NHRVHVAGGVLAAEASLRLTNYFRAKR 164


>gi|257789865|ref|YP_003180471.1| CMP/dCMP deaminase zinc-binding [Eggerthella lenta DSM 2243]
 gi|317489321|ref|ZP_07947835.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Eggerthella sp. 1_3_56FAA]
 gi|325829718|ref|ZP_08163181.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Eggerthella sp. HGA1]
 gi|257473762|gb|ACV54082.1| CMP/dCMP deaminase zinc-binding [Eggerthella lenta DSM 2243]
 gi|316911566|gb|EFV33161.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Eggerthella sp. 1_3_56FAA]
 gi|325488213|gb|EGC90645.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Eggerthella sp. HGA1]
          Length = 167

 Score = 83.2 bits (204), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 51/157 (32%), Positives = 79/157 (50%), Gaps = 16/157 (10%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNN------------KIISRAGNRNRELKDVTAHA 54
           +M  A+EEA+ A   +E+P+GAV V               ++I+RA N     +D   HA
Sbjct: 6   YMRMAIEEARRAEELDEVPIGAVVVYEPIDPGTRRPLAEPQVIARACNLRETTQDPAGHA 65

Query: 55  EILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           E +A++     L    L    +YVTLEPC MCA  +  AR+ R  YGA++PK G +  GT
Sbjct: 66  EFIALKQAAERLGVWRLTGCTVYVTLEPCVMCAGLMHQARVDRCVYGAADPKAGAL--GT 123

Query: 115 QFYTLAT--CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +   A    +H+ E   G+      ++++ FF  +R
Sbjct: 124 LYAVNADERLNHTFEAVSGVLGDECAELLRSFFARKR 160


>gi|332284214|ref|YP_004416125.1| putative zinc-binding hydrolase [Pusillimonas sp. T7-7]
 gi|330428167|gb|AEC19501.1| putative zinc-binding hydrolase [Pusillimonas sp. T7-7]
          Length = 152

 Score = 83.2 bits (204), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 48/126 (38%), Positives = 67/126 (53%), Gaps = 1/126 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  ALE+A+ A    E+PVGAV +    ++I    NR     D T HAEI+A+R     +
Sbjct: 1   MRLALEQAELAYAAGEVPVGAVVLDAQGQLIGAGSNRTIGAHDPTGHAEIVALRAAAAHV 60

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               LP   LYVTLEPC MC  A+  AR+ R+ YGA +PK G   +    +T+   +H  
Sbjct: 61  RNYRLPGASLYVTLEPCAMCMGAMLHARLARVVYGAVDPKTGACGSVLSVHTVPQLNHQT 120

Query: 127 EIYPGI 132
            +  G+
Sbjct: 121 AVEGGV 126


>gi|167911457|ref|ZP_02498548.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia
           pseudomallei 112]
          Length = 185

 Score = 83.2 bits (204), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 48/128 (37%), Positives = 71/128 (55%)

Query: 22  NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81
            E+PVGAV V  +++I+R  N      D +AHAE+ A+R   R L    +P  +LYVTLE
Sbjct: 51  GEVPVGAVIVRGDEVIARGFNHPIGGHDPSAHAEMAALRAAARALRNYRMPGCELYVTLE 110

Query: 82  PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141
           PC MC+ AI  ARI R+ +GA +PK G   +    +  A  +H   +  G+       ++
Sbjct: 111 PCLMCSGAIMHARIARVVFGAPDPKTGACGSVVDAFADARLNHHTTVEGGVLADECGAVL 170

Query: 142 QDFFKERR 149
           + FF +RR
Sbjct: 171 KSFFAQRR 178


>gi|206603205|gb|EDZ39685.1| Putative zinc-binding cytidine/deoxycytidylate deaminase
           [Leptospirillum sp. Group II '5-way CG']
          Length = 162

 Score = 83.2 bits (204), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 48/144 (33%), Positives = 74/144 (51%), Gaps = 1/144 (0%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNN-KIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           +M+ AL EA+ A  +NEIP+GA+ V  N  ++ R  N+     D TAHAEI+A+R     
Sbjct: 15  WMTEALSEAKTAMKKNEIPIGALLVDGNGTVLGRGHNQRIGSMDPTAHAEIVALRSSGLH 74

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           +    LP   LYVT+EPC MC  A+  AR+  + +G   P+ G   +           H 
Sbjct: 75  VKNYRLPGTTLYVTVEPCLMCFGALLEARVETVVFGIREPRWGVTGSLYDLQNDPRFPHR 134

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
             +  G+     + +++ FF+ RR
Sbjct: 135 IRVREGVLSHACQDLLRSFFQSRR 158


>gi|219127140|ref|XP_002183799.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217404522|gb|EEC44468.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 160

 Score = 83.2 bits (204), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 47/147 (31%), Positives = 80/147 (54%), Gaps = 4/147 (2%)

Query: 7   FMSCALEEAQNAALRNEIPVGAV--AVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           FM+ ALE++  A    E+P+GA+  +V   +I+  + N+  +  D +AHAE+LA+R   R
Sbjct: 12  FMTMALEQSIVAGKCGEVPIGALVPSVHRLQILGSSHNQVEQKYDASAHAELLAMRQAAR 71

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT--C 122
            +    L    LY TLEPC +C A+    R+ R+ YGAS+ + G + +      +A    
Sbjct: 72  RIRNWRLQSCTLYSTLEPCVVCLASCQAFRVSRVVYGASDFRLGAVHSHIALLDMAQHPF 131

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           H+   +  G+    S ++++ FF+ RR
Sbjct: 132 HNVTSVIGGVHNTTSAELLRSFFRSRR 158


>gi|281202068|gb|EFA76273.1| adenosine deaminase [Polysphondylium pallidum PN500]
          Length = 213

 Score = 82.8 bits (203), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 54/160 (33%), Positives = 84/160 (52%), Gaps = 13/160 (8%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI- 59
           ++K + FM  AL EA+ A    E+PVG V V N+ +I+   N+    K+ T HAEI A+ 
Sbjct: 25  IEKHSKFMKLALNEAKKALDEGEVPVGCVIVHNDIVIAAGSNKTNIKKNATRHAEIEALD 84

Query: 60  -----RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGT 114
                    +    ++L +  LYVT+EPC MCAA + LA+I  +Y+G  N K GG  NG+
Sbjct: 85  SIYLSENASKFGGDKLLSDCKLYVTVEPCIMCAAVLQLAKINIVYFGCYNDKFGG--NGS 142

Query: 115 QFYTLA-TCH---HSPEIYPGISEQRSRQIIQDF-FKERR 149
                +  C    H      G+ + ++  ++Q F F+E +
Sbjct: 143 ILPVHSIDCFERGHPYNCVSGVMKDQAIHLLQKFYFQENK 182


>gi|295676796|ref|YP_003605320.1| CMP/dCMP deaminase zinc-binding protein [Burkholderia sp. CCGE1002]
 gi|295436639|gb|ADG15809.1| CMP/dCMP deaminase zinc-binding protein [Burkholderia sp. CCGE1002]
          Length = 249

 Score = 82.8 bits (203), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 45/122 (36%), Positives = 66/122 (54%)

Query: 24  IPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83
           +PVGAV V  +++I+   N      D +AHAE++A+R   + L    LP  +LYVTLEPC
Sbjct: 79  VPVGAVLVRGDEVIATGFNHPIGAHDPSAHAEMVALRAAAQSLENYRLPGCELYVTLEPC 138

Query: 84  TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQD 143
            MCA AI  ARI R+ +GA +PK G   +    +     +H   +  G+ E      ++ 
Sbjct: 139 LMCAGAIMHARIARVVFGARDPKTGACGSVVDAFANPRLNHHTTVSGGVLEAECGAALRS 198

Query: 144 FF 145
           FF
Sbjct: 199 FF 200


>gi|318062198|ref|ZP_07980919.1| cytidine/deoxycytidine deaminase [Streptomyces sp. SA3_actG]
 gi|318079391|ref|ZP_07986723.1| cytidine/deoxycytidine deaminase [Streptomyces sp. SA3_actF]
          Length = 163

 Score = 82.8 bits (203), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 49/131 (37%), Positives = 70/131 (53%), Gaps = 5/131 (3%)

Query: 22  NEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80
            EIPVGAV +  +   ++RA N      D TAHAE+LA+R    +  +  L    L VTL
Sbjct: 35  GEIPVGAVVLDASGTELARARNEREATHDPTAHAEVLALRRAAAVRGEWRLTGCTLVVTL 94

Query: 81  EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT--CHHSPEIYPGISEQRSR 138
           EPC MCA A++ +R+ R+ YGA +PK G    G+Q+  L     +H  E+  G+    S 
Sbjct: 95  EPCPMCAGALTQSRVERVVYGARDPKAGAA--GSQWDLLRDRRLNHRAEVVEGVLAPEST 152

Query: 139 QIIQDFFKERR 149
            ++  FF   R
Sbjct: 153 ALLDAFFTATR 163


>gi|332969045|gb|EGK08085.1| tRNA-specific adenosine deaminase [Kingella kingae ATCC 23330]
          Length = 246

 Score = 82.8 bits (203), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 45/110 (40%), Positives = 65/110 (59%)

Query: 23  EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEP 82
           E+PVGAV V   +II++A NR     D+  HAE+ A+ +  + L    L + DLYV+LEP
Sbjct: 116 EVPVGAVVVHRGEIIAQAHNRCIADCDIGRHAEMNALALAGKTLGNYRLADCDLYVSLEP 175

Query: 83  CTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGI 132
           CTMCA+A+  ARIRR+ + AS PK G   +    +T +  +    +  GI
Sbjct: 176 CTMCASAMIQARIRRVIFAASEPKTGAAGSVINLFTNSQLNQHTAVLGGI 225


>gi|116074668|ref|ZP_01471929.1| cytidine/deoxycytidylate deaminase family protein [Synechococcus
           sp. RS9916]
 gi|116067890|gb|EAU73643.1| cytidine/deoxycytidylate deaminase family protein [Synechococcus
           sp. RS9916]
          Length = 167

 Score = 82.8 bits (203), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 47/145 (32%), Positives = 75/145 (51%), Gaps = 3/145 (2%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNK--IISRAGNRNRELKDVTAHAEILAIRMGCR 64
           +M   L+ A+    + E+PV A+ VL+ K   I   GN     +D   HAE++AIR    
Sbjct: 10  WMGLLLQRAEAIGRQGEVPVSAL-VLDGKGRCIGFGGNTRERDQDPLGHAELVAIRQATV 68

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
           +     L +  L VTLEPC MCA A+  AR+ ++ YGA +PK G +          + HH
Sbjct: 69  LRGDWRLNDCTLLVTLEPCPMCAGALVQARMGQVIYGARDPKRGAMGGTIDLSQHPSAHH 128

Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149
             ++  G+ E+ +  ++  +F+ RR
Sbjct: 129 HMKVIGGVLEEEASTMLAQWFRLRR 153


>gi|167894828|ref|ZP_02482230.1| putative deaminase [Burkholderia pseudomallei 7894]
          Length = 150

 Score = 82.8 bits (203), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 48/128 (37%), Positives = 71/128 (55%)

Query: 22  NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81
            E+PVGAV V  +++I+R  N      D +AHAE+ A+R   R L    +P  +LYVTLE
Sbjct: 3   GEVPVGAVIVRGDEVIARGFNHPIGGHDPSAHAEMAALRAAARALRNYRMPGCELYVTLE 62

Query: 82  PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141
           PC MC+ AI  ARI R+ +GA +PK G   +    +  A  +H   +  G+       ++
Sbjct: 63  PCLMCSGAIMHARIARVVFGAPDPKTGACGSVVDAFADARLNHHTTVEGGVLADECGAVL 122

Query: 142 QDFFKERR 149
           + FF +RR
Sbjct: 123 KSFFAQRR 130


>gi|53723703|ref|YP_103157.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia
           mallei ATCC 23344]
 gi|52427126|gb|AAU47719.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia
           mallei ATCC 23344]
          Length = 162

 Score = 82.8 bits (203), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 48/128 (37%), Positives = 71/128 (55%)

Query: 22  NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81
            E+PVGAV V  +++I+R  N      D +AHAE+ A+R   R L    +P  +LYVTLE
Sbjct: 15  GEVPVGAVIVRGDEVIARGFNHPIGGHDPSAHAEMAALRAAARALRNYRMPGCELYVTLE 74

Query: 82  PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141
           PC MC+ AI  ARI R+ +GA +PK G   +    +  A  +H   +  G+       ++
Sbjct: 75  PCLMCSGAIMHARIARVVFGAPDPKTGACGSVVDAFADARLNHHTTVEGGVLADECGAVL 134

Query: 142 QDFFKERR 149
           + FF +RR
Sbjct: 135 KSFFAQRR 142


>gi|78356822|ref|YP_388271.1| tRNA-adenosine deaminase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
 gi|78219227|gb|ABB38576.1| tRNA-adenosine deaminase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
          Length = 172

 Score = 82.8 bits (203), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 60/151 (39%), Positives = 81/151 (53%), Gaps = 3/151 (1%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELK--DVTAHAEILA 58
            K     M  ALE+A  A L  E+PVGAV V  +  +  +G RNR +   D TAHAEILA
Sbjct: 22  WKSWEALMELALEQAVLAQLHGEVPVGAVVVAPDGAVLGSG-RNRPIATCDPTAHAEILA 80

Query: 59  IRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
           IR  C       L +  L VTLEPC MC  AI  AR+  + YGAS+ + G +++      
Sbjct: 81  IRQACIHTGNYRLDDAVLVVTLEPCHMCTGAIIHARLAGVVYGASDKRAGAVDSCLDGLE 140

Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
           L   +H P    G+ E    +++ +FFKE+R
Sbjct: 141 LPFHNHRPWYMSGVCEAECSRLLAEFFKEKR 171


>gi|168010085|ref|XP_001757735.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162691011|gb|EDQ77375.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 413

 Score = 82.8 bits (203), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 59/157 (37%), Positives = 79/157 (50%), Gaps = 14/157 (8%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  AL+EA+ AA   E+PVGAV V  NKII+R  N      D TAHAE+L IR     L
Sbjct: 214 FMQEALKEAKKAAKLGEVPVGAVLVHKNKIIARFHNEVETTGDPTAHAEMLCIRCAAAQL 273

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC---- 122
               L +V LYVTLEPC MCA AI   R+  + +GA N   G   +  + + +++     
Sbjct: 274 GGWRLTDVTLYVTLEPCPMCAGAILQGRVSEVVWGARNSLLGADGSWIKLFPVSSSGEQE 333

Query: 123 ----------HHSPEIYPGISEQRSRQIIQDFFKERR 149
                     H +  +  G+  +    I+Q FF  RR
Sbjct: 334 PKCKDYLHPFHRTITVRRGVLGEECGDIMQTFFAMRR 370


>gi|313606255|gb|EFR83242.1| tRNA-specific adenosine deaminase [Listeria monocytogenes FSL
           F2-208]
          Length = 116

 Score = 82.8 bits (203), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 38/102 (37%), Positives = 62/102 (60%)

Query: 48  KDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKG 107
           ++   HAE+LAI+  C+  +   L   +LYVTLEPC MC+ AI L+RI ++YYGA +PK 
Sbjct: 7   QNAVTHAELLAIQDACKHQNSWRLSGAELYVTLEPCPMCSGAILLSRIEKVYYGAKDPKA 66

Query: 108 GGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
           G   +          +H+ E+  G+ E+ S ++++ FF++ R
Sbjct: 67  GTAGSLMNLLQDDRFNHTCEVEAGLMEKESSEMLKSFFQDLR 108


>gi|53719734|ref|YP_108720.1| putative deaminase [Burkholderia pseudomallei K96243]
 gi|52210148|emb|CAH36126.1| putative deaminase [Burkholderia pseudomallei K96243]
          Length = 174

 Score = 82.4 bits (202), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 48/128 (37%), Positives = 71/128 (55%)

Query: 22  NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81
            E+PVGAV V  +++I+R  N      D +AHAE+ A+R   R L    +P  +LYVTLE
Sbjct: 27  GEVPVGAVIVRGDEVIARGFNHPIGGHDPSAHAEMAALRAAARALRNYRMPGCELYVTLE 86

Query: 82  PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141
           PC MC+ AI  ARI R+ +GA +PK G   +    +  A  +H   +  G+       ++
Sbjct: 87  PCLMCSGAIMHARIARVVFGAPDPKTGACGSVVDAFADARLNHHTTVEGGVLADECGAVL 146

Query: 142 QDFFKERR 149
           + FF +RR
Sbjct: 147 KSFFAQRR 154


>gi|302697295|ref|XP_003038326.1| hypothetical protein SCHCODRAFT_63904 [Schizophyllum commune H4-8]
 gi|300112023|gb|EFJ03424.1| hypothetical protein SCHCODRAFT_63904 [Schizophyllum commune H4-8]
          Length = 194

 Score = 82.4 bits (202), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 54/150 (36%), Positives = 82/150 (54%), Gaps = 14/150 (9%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M+ A+  AQ A    E+PVG + V +NKII+ A NR  EL++ T HAE+ AI    RIL
Sbjct: 8   WMAEAMNMAQEALDAGEVPVGCIFVRDNKIIASARNRTNELRNATRHAELEAID---RIL 64

Query: 67  SQEIL-PEV--------DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN--GTQ 115
           + + L PE+         LYVT+EPC MCA+A+    I+ ++YG  N + GG  +  G  
Sbjct: 65  ADKTLTPEICEYPLDTTTLYVTVEPCIMCASALRQLGIKEVFYGCGNDRFGGCGSVLGVN 124

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
                  H +   +PG   + +  I++ F+
Sbjct: 125 ESVPHPKHPAYRAHPGYLREEAIMILRRFY 154


>gi|224047988|ref|XP_002195924.1| PREDICTED: adenosine deaminase, tRNA-specific 2, TAD2 homolog (S.
           cerevisiae) [Taeniopygia guttata]
          Length = 172

 Score = 82.4 bits (202), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 43/102 (42%), Positives = 60/102 (58%), Gaps = 6/102 (5%)

Query: 14  EAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQ----- 68
           EA+ A  + E+PVG + V N ++I R  N   E K+ T HAE++AI        Q     
Sbjct: 14  EAKEALEKGEVPVGCLLVYNGEVIGRGRNEVNETKNATGHAEMVAIDQVLDWCKQHKRDY 73

Query: 69  -EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109
            E+ P++ LYVT+EPC MCAAA+ L +I R+ YG  N + GG
Sbjct: 74  REVFPQLVLYVTVEPCIMCAAAVRLMKIPRVVYGCRNERFGG 115


>gi|255017439|ref|ZP_05289565.1| tRNA-specific adenosine deaminase [Listeria monocytogenes FSL
           F2-515]
          Length = 109

 Score = 82.4 bits (202), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 39/101 (38%), Positives = 60/101 (59%)

Query: 49  DVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGG 108
           +   HAE+LAI+  C+  +   L   +LYVTLEPC MC+ AI L+RI ++YYGA +PK G
Sbjct: 1   NAVTHAELLAIQDACKHQNSWRLSGAELYVTLEPCPMCSGAILLSRIEKVYYGAKDPKAG 60

Query: 109 GIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
              +          +H+ E+  G+ E  S ++++ FF+E R
Sbjct: 61  TAGSLMNLLQDDRFNHTCEVEAGLMESESSEMLKSFFQELR 101


>gi|317132506|ref|YP_004091820.1| CMP/dCMP deaminase zinc-binding protein [Ethanoligenens harbinense
           YUAN-3]
 gi|315470485|gb|ADU27089.1| CMP/dCMP deaminase zinc-binding protein [Ethanoligenens harbinense
           YUAN-3]
          Length = 160

 Score = 82.4 bits (202), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 55/144 (38%), Positives = 77/144 (53%), Gaps = 1/144 (0%)

Query: 6   VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
            +M  ALE+A+ A    E+P+GAV V +   ++   NR     +  AHAE  AIR  C  
Sbjct: 11  TWMRLALEQAERAGREGEVPIGAVIVKDGAALAVGRNRRETDHNALAHAEAEAIRAACAA 70

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           L    L    LYVTLEPC MCA AI  AR+  + +GA +PK G   +    ++    HH 
Sbjct: 71  LGSWRLSGCTLYVTLEPCPMCAGAIINARVDTVVFGAYDPKAGASGSVIDLFSCPFNHH- 129

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
           P +  G+ E+  R+++QDFF   R
Sbjct: 130 PAVMGGVLEEDCRRLLQDFFAGLR 153


>gi|320009620|gb|ADW04470.1| CMP/dCMP deaminase zinc-binding protein [Streptomyces flavogriseus
           ATCC 33331]
          Length = 142

 Score = 82.4 bits (202), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 54/142 (38%), Positives = 75/142 (52%), Gaps = 1/142 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELK-DVTAHAEILAIRMGCRIL 66
           M  AL+EA  AA   ++PVGAV +  +  +   G+  RE   D TAHAE+LA+R     L
Sbjct: 1   MRQALDEAAQAASAGDVPVGAVVLGPDGALLATGHNEREASHDPTAHAEVLALRRAAAAL 60

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L    L VTLEPCTMCA A+  +R+ R+ YGA + K G   +          +H P
Sbjct: 61  GSWRLTGCTLVVTLEPCTMCAGALVQSRVARVVYGARDEKAGAAGSLWDVVRDRRLNHRP 120

Query: 127 EIYPGISEQRSRQIIQDFFKER 148
           E+  G+ E     ++  FF+ER
Sbjct: 121 EVIHGVLEDLCADLLTAFFRER 142


>gi|25026753|ref|NP_736807.1| hypothetical protein CE0197 [Corynebacterium efficiens YS-314]
 gi|23492032|dbj|BAC17007.1| conserved hypothetical protein [Corynebacterium efficiens YS-314]
          Length = 160

 Score = 82.4 bits (202), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 52/144 (36%), Positives = 77/144 (53%), Gaps = 3/144 (2%)

Query: 8   MSCALEEAQNAALRNEIPVGAVA-VLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  ALE A+      ++PVGAV    + +I++ A NR    +D TAHAEI+A+R   R  
Sbjct: 18  MRHALEIARQTP-PGDVPVGAVIYAPDGQILATATNRRETDRDPTAHAEIIALRCAARRF 76

Query: 67  SQEI-LPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           +    L +  L VTLEPC+MCA A+  AR+ RL +GA  P+ G   +           H 
Sbjct: 77  TDGWRLTDCTLVVTLEPCSMCAGALVGARVGRLVFGAFEPRTGACGSVFDVVRDPAVLHR 136

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
            E+  G+ E+   +++ DFF  +R
Sbjct: 137 AEVTGGVLEEDCAKLMTDFFSGQR 160


>gi|224087290|ref|XP_002308113.1| predicted protein [Populus trichocarpa]
 gi|222854089|gb|EEE91636.1| predicted protein [Populus trichocarpa]
          Length = 155

 Score = 82.4 bits (202), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 46/112 (41%), Positives = 66/112 (58%), Gaps = 9/112 (8%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI------- 59
           FM  A+E+A++A    E+PVG V V + K+I+   NR  E ++ T HAE+ AI       
Sbjct: 16  FMELAIEQAEDALNSLEVPVGCVIVEDGKVIASGRNRTTETRNATRHAEMEAIDVLLEQW 75

Query: 60  -RMGCRILS-QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109
            ++G  +    E +    LYVT EPC MCAAA+S+  I+ +YYG +N K GG
Sbjct: 76  QKIGLSVSEVAEKISTCSLYVTCEPCIMCAAALSILGIKEVYYGCANDKFGG 127


>gi|270159636|ref|ZP_06188292.1| tRNA-specific adenosine deaminase [Legionella longbeachae D-4968]
 gi|289165578|ref|YP_003455716.1| tRNA-specific adenosine deaminase [Legionella longbeachae NSW150]
 gi|269987975|gb|EEZ94230.1| tRNA-specific adenosine deaminase [Legionella longbeachae D-4968]
 gi|288858751|emb|CBJ12656.1| tRNA-specific adenosine deaminase [Legionella longbeachae NSW150]
          Length = 149

 Score = 82.4 bits (202), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 54/147 (36%), Positives = 78/147 (53%), Gaps = 7/147 (4%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           +M  A E+A  A    E+PVGA+ V N N+++    N  ++  D ++HAEI AIR   + 
Sbjct: 6   WMRQAYEQALLAQTEGEVPVGAILVSNENQLLGAGRNLIQKSHDPSSHAEIQAIRQASQR 65

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPK---GGGIENGTQFYTLATC 122
           L    L +  LYVTLEPC MCA  +  ARI RL +   + K    G + N  Q Y L   
Sbjct: 66  LQNHRLLDTTLYVTLEPCAMCAGLMVHARISRLVFATRDFKSGAAGSVYNLLQGYPL--- 122

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H  +I  GI + +   ++ +FFK  R
Sbjct: 123 NHKVQIDEGIMQAQCASLLSEFFKACR 149


>gi|167824713|ref|ZP_02456184.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia
           pseudomallei 9]
 gi|226200116|ref|ZP_03795662.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia
           pseudomallei Pakistan 9]
 gi|225927800|gb|EEH23841.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia
           pseudomallei Pakistan 9]
          Length = 198

 Score = 82.4 bits (202), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 48/128 (37%), Positives = 71/128 (55%)

Query: 22  NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81
            E+PVGAV V  +++I+R  N      D +AHAE+ A+R   R L    +P  +LYVTLE
Sbjct: 51  GEVPVGAVIVRGDEVIARGFNHPIGGHDPSAHAEMAALRAAARALRNYRMPGCELYVTLE 110

Query: 82  PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141
           PC MC+ AI  ARI R+ +GA +PK G   +    +  A  +H   +  G+       ++
Sbjct: 111 PCLMCSGAIMHARIARVVFGAPDPKTGACGSVVDAFADARLNHHTTVEGGVLADECGAVL 170

Query: 142 QDFFKERR 149
           + FF +RR
Sbjct: 171 KSFFAQRR 178


>gi|259508111|ref|ZP_05751011.1| tRNA-specific adenosine deaminase [Corynebacterium efficiens
           YS-314]
 gi|259164334|gb|EEW48888.1| tRNA-specific adenosine deaminase [Corynebacterium efficiens
           YS-314]
          Length = 159

 Score = 82.4 bits (202), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 52/144 (36%), Positives = 77/144 (53%), Gaps = 3/144 (2%)

Query: 8   MSCALEEAQNAALRNEIPVGAVA-VLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  ALE A+      ++PVGAV    + +I++ A NR    +D TAHAEI+A+R   R  
Sbjct: 17  MRHALEIARQTP-PGDVPVGAVIYAPDGQILATATNRRETDRDPTAHAEIIALRCAARRF 75

Query: 67  SQEI-LPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           +    L +  L VTLEPC+MCA A+  AR+ RL +GA  P+ G   +           H 
Sbjct: 76  TDGWRLTDCTLVVTLEPCSMCAGALVGARVGRLVFGAFEPRTGACGSVFDVVRDPAVLHR 135

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
            E+  G+ E+   +++ DFF  +R
Sbjct: 136 AEVTGGVLEEDCAKLMTDFFSGQR 159


>gi|76811739|ref|YP_333930.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia
           pseudomallei 1710b]
 gi|121599544|ref|YP_993329.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia
           mallei SAVP1]
 gi|124383998|ref|YP_001029233.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia
           mallei NCTC 10229]
 gi|126450143|ref|YP_001080836.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia
           mallei NCTC 10247]
 gi|167000596|ref|ZP_02266407.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia
           mallei PRL-20]
 gi|238562434|ref|ZP_04610071.1| tRNA-specific adenosine deaminase [Burkholderia mallei GB8 horse 4]
 gi|254177488|ref|ZP_04884143.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia
           mallei ATCC 10399]
 gi|254189248|ref|ZP_04895759.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia
           pseudomallei Pasteur 52237]
 gi|254200108|ref|ZP_04906474.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia
           mallei FMH]
 gi|254206447|ref|ZP_04912799.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia
           mallei JHU]
 gi|254259652|ref|ZP_04950706.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia
           pseudomallei 1710a]
 gi|254358144|ref|ZP_04974417.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia
           mallei 2002721280]
 gi|76581192|gb|ABA50667.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia
           pseudomallei 1710b]
 gi|121228354|gb|ABM50872.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia
           mallei SAVP1]
 gi|124292018|gb|ABN01287.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia
           mallei NCTC 10229]
 gi|126243013|gb|ABO06106.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia
           mallei NCTC 10247]
 gi|147749704|gb|EDK56778.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia
           mallei FMH]
 gi|147753890|gb|EDK60955.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia
           mallei JHU]
 gi|148027271|gb|EDK85292.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia
           mallei 2002721280]
 gi|157936927|gb|EDO92597.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia
           pseudomallei Pasteur 52237]
 gi|160698527|gb|EDP88497.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia
           mallei ATCC 10399]
 gi|238522629|gb|EEP86072.1| tRNA-specific adenosine deaminase [Burkholderia mallei GB8 horse 4]
 gi|243063523|gb|EES45709.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia
           mallei PRL-20]
 gi|254218341|gb|EET07725.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia
           pseudomallei 1710a]
          Length = 198

 Score = 82.4 bits (202), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 48/128 (37%), Positives = 71/128 (55%)

Query: 22  NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81
            E+PVGAV V  +++I+R  N      D +AHAE+ A+R   R L    +P  +LYVTLE
Sbjct: 51  GEVPVGAVIVRGDEVIARGFNHPIGGHDPSAHAEMAALRAAARALRNYRMPGCELYVTLE 110

Query: 82  PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141
           PC MC+ AI  ARI R+ +GA +PK G   +    +  A  +H   +  G+       ++
Sbjct: 111 PCLMCSGAIMHARIARVVFGAPDPKTGACGSVVDAFADARLNHHTTVEGGVLADECGAVL 170

Query: 142 QDFFKERR 149
           + FF +RR
Sbjct: 171 KSFFAQRR 178


>gi|330470612|ref|YP_004408355.1| CMP/dCMP deaminase [Verrucosispora maris AB-18-032]
 gi|328813583|gb|AEB47755.1| CMP/dCMP deaminase [Verrucosispora maris AB-18-032]
          Length = 200

 Score = 82.4 bits (202), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 47/126 (37%), Positives = 68/126 (53%), Gaps = 1/126 (0%)

Query: 22  NEIPVGAVAVLNNKIISRAGNRNRELK-DVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80
           +++PVGAV    +      G   REL  D TAHAE+LA+R G   L +  L    L VTL
Sbjct: 75  DDVPVGAVLYGPDGDELAIGRNERELTGDPTAHAEVLALRRGAERLGRWRLDGCILVVTL 134

Query: 81  EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140
           EPCTMCA A+ L+R+  + +GA  PK G   +          +H PE+Y G+    +  +
Sbjct: 135 EPCTMCAGALVLSRVSTVVFGAWEPKTGAAGSLWDVLRDRRLNHRPEVYGGVLATETGTV 194

Query: 141 IQDFFK 146
           ++ FF+
Sbjct: 195 MRAFFR 200


>gi|254198049|ref|ZP_04904471.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia
           pseudomallei S13]
 gi|169654790|gb|EDS87483.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia
           pseudomallei S13]
          Length = 198

 Score = 82.4 bits (202), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 48/128 (37%), Positives = 71/128 (55%)

Query: 22  NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81
            E+PVGAV V  +++I+R  N      D +AHAE+ A+R   R L    +P  +LYVTLE
Sbjct: 51  GEVPVGAVIVRGDEVIARGFNHPIGGHDPSAHAEMAALRAAARALRNYRMPGCELYVTLE 110

Query: 82  PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141
           PC MC+ AI  ARI R+ +GA +PK G   +    +  A  +H   +  G+       ++
Sbjct: 111 PCLMCSGAIMHARIARVVFGAPDPKTGACGSVVDAFADARLNHHTTVEGGVLADECGAVL 170

Query: 142 QDFFKERR 149
           + FF +RR
Sbjct: 171 KSFFAQRR 178


>gi|126441141|ref|YP_001059426.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia
           pseudomallei 668]
 gi|126454685|ref|YP_001066697.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia
           pseudomallei 1106a]
 gi|134277676|ref|ZP_01764391.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia
           pseudomallei 305]
 gi|167739120|ref|ZP_02411894.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia
           pseudomallei 14]
 gi|217421765|ref|ZP_03453269.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia
           pseudomallei 576]
 gi|237812753|ref|YP_002897204.1| tRNA-specific adenosine deaminase [Burkholderia pseudomallei
           MSHR346]
 gi|242317933|ref|ZP_04816949.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia
           pseudomallei 1106b]
 gi|126220634|gb|ABN84140.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia
           pseudomallei 668]
 gi|126228327|gb|ABN91867.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia
           pseudomallei 1106a]
 gi|134251326|gb|EBA51405.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia
           pseudomallei 305]
 gi|217395507|gb|EEC35525.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia
           pseudomallei 576]
 gi|237506312|gb|ACQ98630.1| tRNA-specific adenosine deaminase [Burkholderia pseudomallei
           MSHR346]
 gi|242141172|gb|EES27574.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia
           pseudomallei 1106b]
          Length = 198

 Score = 82.0 bits (201), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 48/128 (37%), Positives = 71/128 (55%)

Query: 22  NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81
            E+PVGAV V  +++I+R  N      D +AHAE+ A+R   R L    +P  +LYVTLE
Sbjct: 51  GEVPVGAVIVRGDEVIARGFNHPIGGHDPSAHAEMAALRAAARALRNYRMPGCELYVTLE 110

Query: 82  PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141
           PC MC+ AI  ARI R+ +GA +PK G   +    +  A  +H   +  G+       ++
Sbjct: 111 PCLMCSGAIMHARIARVVFGAPDPKTGACGSVVDAFADARLNHHTTVEGGVLADECGAVL 170

Query: 142 QDFFKERR 149
           + FF +RR
Sbjct: 171 KSFFAQRR 178


>gi|254297249|ref|ZP_04964702.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia
           pseudomallei 406e]
 gi|157807925|gb|EDO85095.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia
           pseudomallei 406e]
          Length = 198

 Score = 82.0 bits (201), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 48/128 (37%), Positives = 71/128 (55%)

Query: 22  NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81
            E+PVGAV V  +++I+R  N      D +AHAE+ A+R   R L    +P  +LYVTLE
Sbjct: 51  GEVPVGAVIVRGDEVIARGFNHPIGGHDPSAHAEMAALRAAARALRNYRMPGCELYVTLE 110

Query: 82  PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141
           PC MC+ AI  ARI R+ +GA +PK G   +    +  A  +H   +  G+       ++
Sbjct: 111 PCLMCSGAIMHARIARVVFGAPDPKTGACGSVVDAFADARLNHHTTVEGGVLADECGAVL 170

Query: 142 QDFFKERR 149
           + FF +RR
Sbjct: 171 KSFFAQRR 178


>gi|215422331|ref|NP_001135855.1| adenosine deaminase, tRNA-specific 2, TAD2 homolog [Nasonia
           vitripennis]
          Length = 169

 Score = 82.0 bits (201), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 46/147 (31%), Positives = 83/147 (56%), Gaps = 10/147 (6%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR---MGC 63
           +M  ALE+A+ +  + E+PVG + +  NKII+   N   E ++ T HAE+  I    + C
Sbjct: 6   WMDKALEKAEESLKKGEVPVGCLFLYENKIIATGSNTVNETRNATRHAELNCIDDVLVFC 65

Query: 64  RILS---QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
           +  +   +E+   +D+ VT+EPC MCAAA+   +IR + YG +N + GG +     Y ++
Sbjct: 66  QKNNYNYKEVFKNIDVVVTVEPCIMCAAALHQLQIRSIIYGCANDRFGGCK---SVYEVS 122

Query: 121 TCHHSP-EIYPGISEQRSRQIIQDFFK 146
             + S   +   +  + + Q+++DF+K
Sbjct: 123 KVYESKINVVGNVKGEEAMQLLKDFYK 149


>gi|167919469|ref|ZP_02506560.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia
           pseudomallei BCC215]
          Length = 198

 Score = 82.0 bits (201), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 48/128 (37%), Positives = 71/128 (55%)

Query: 22  NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81
            E+PVGAV V  +++I+R  N      D +AHAE+ A+R   R L    +P  +LYVTLE
Sbjct: 51  GEVPVGAVIVRGDEVIARGFNHPIGGHDPSAHAEMAALRAAARALRNYRMPGCELYVTLE 110

Query: 82  PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141
           PC MC+ AI  ARI R+ +GA +PK G   +    +  A  +H   +  G+       ++
Sbjct: 111 PCLMCSGAIMHARIARVVFGAPDPKTGACGSVVDAFADARLNHHTTVEGGVLADECGAVL 170

Query: 142 QDFFKERR 149
           + FF +RR
Sbjct: 171 KSFFAQRR 178


>gi|115452727|ref|NP_001049964.1| Os03g0321900 [Oryza sativa Japonica Group]
 gi|108707878|gb|ABF95673.1| Cytidine and deoxycytidylate deaminase zinc-binding region family
           protein, expressed [Oryza sativa Japonica Group]
 gi|113548435|dbj|BAF11878.1| Os03g0321900 [Oryza sativa Japonica Group]
 gi|218192723|gb|EEC75150.1| hypothetical protein OsI_11352 [Oryza sativa Indica Group]
          Length = 183

 Score = 82.0 bits (201), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 52/134 (38%), Positives = 72/134 (53%), Gaps = 9/134 (6%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  ALE+A+ A    E+PVG V V + K+IS   N+    ++ T HAE+ AI +  R  
Sbjct: 8   FMELALEQAKFALDNLEVPVGCVIVEDGKVISSGSNKTNATRNATRHAEMEAIDILLREW 67

Query: 67  SQEIL--PEV-------DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFY 117
               L  P+V       DLYVT EPC MCA A+S+  IR +Y+G +N K GG  +    +
Sbjct: 68  QGMGLDQPQVAEKFARCDLYVTCEPCIMCAMALSILGIREVYFGCANDKFGGCGSIMSLH 127

Query: 118 TLATCHHSPEIYPG 131
             ++   S E  PG
Sbjct: 128 QSSSAELSGEEIPG 141


>gi|117919687|ref|YP_868879.1| tRNA-adenosine deaminase [Shewanella sp. ANA-3]
 gi|117612019|gb|ABK47473.1| tRNA-adenosine deaminase [Shewanella sp. ANA-3]
          Length = 222

 Score = 82.0 bits (201), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 49/143 (34%), Positives = 69/143 (48%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  A+  A+ A    E+PVGAV V   + I+   N +    D  AHAEI  +R   + +
Sbjct: 62  WMRVAMSMAEKAEAAGEVPVGAVLVKGGQQIAAGYNLSISEHDPCAHAEIQCLRAAGQTI 121

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  LYVTLEPC MCA A+  +RI R+ +GA + K G              +H  
Sbjct: 122 ENYRLLDTTLYVTLEPCAMCAGAMVHSRIARVVFGAKDEKTGAAGTVLNLLQHPAFNHQV 181

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+  G+  Q     +  FFK RR
Sbjct: 182 EVTSGVLAQDCADQLSRFFKRRR 204


>gi|167903219|ref|ZP_02490424.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia
           pseudomallei NCTC 13177]
 gi|254179364|ref|ZP_04885963.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia
           pseudomallei 1655]
 gi|184209904|gb|EDU06947.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia
           pseudomallei 1655]
          Length = 198

 Score = 82.0 bits (201), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 48/128 (37%), Positives = 71/128 (55%)

Query: 22  NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81
            E+PVGAV V  +++I+R  N      D +AHAE+ A+R   R L    +P  +LYVTLE
Sbjct: 51  GEVPVGAVIVRGDEVIARGFNHPIGGHDPSAHAEMAALRAAARALRNYRMPGCELYVTLE 110

Query: 82  PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141
           PC MC+ AI  ARI R+ +GA +PK G   +    +  A  +H   +  G+       ++
Sbjct: 111 PCLMCSGAIMHARIGRVVFGAPDPKTGACGSVVDAFADARLNHHTTVEGGVLADECGAVL 170

Query: 142 QDFFKERR 149
           + FF +RR
Sbjct: 171 KSFFAQRR 178


>gi|219684000|ref|YP_002470383.1| cytidine and deoxycytidylate deaminase [Bifidobacterium animalis
           subsp. lactis AD011]
 gi|219621650|gb|ACL29807.1| possible cytidine and deoxycytidylate deaminase [Bifidobacterium
           animalis subsp. lactis AD011]
          Length = 152

 Score = 82.0 bits (201), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 49/143 (34%), Positives = 71/143 (49%), Gaps = 1/143 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  AL +A+ A    ++PVGAV +  + ++I R  N      D  AHAEI+A+R    + 
Sbjct: 8   MGEALAQARMARSAGDVPVGAVVLDAHGEVIGRGRNLRERDADPLAHAEIVAMREAAAVR 67

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  L VTLEPC MCA A    RI R+ +G  + K G   +           H P
Sbjct: 68  GNWNLADCTLVVTLEPCPMCAGACLQTRIGRIVFGGWDAKLGACGSVWDIPRDPHVGHEP 127

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+Y G+ E+    ++ +FF  RR
Sbjct: 128 EVYGGVCERECTALLAEFFHSRR 150


>gi|146295406|ref|YP_001179177.1| CMP/dCMP deaminase, zinc-binding [Caldicellulosiruptor
           saccharolyticus DSM 8903]
 gi|145408982|gb|ABP65986.1| tRNA-adenosine deaminase [Caldicellulosiruptor saccharolyticus DSM
           8903]
          Length = 143

 Score = 82.0 bits (201), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 46/127 (36%), Positives = 72/127 (56%), Gaps = 3/127 (2%)

Query: 23  EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEP 82
           +IP+ A  + + +IIS   N +   K+   HAEILAI      LS + L   ++ VT EP
Sbjct: 19  DIPIAAAVLRDGEIISIQKNDS---KNAIFHAEILAILDAASKLSTKDLRGCEMVVTKEP 75

Query: 83  CTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQ 142
           C MC +AI L++I RLY+GA + K G  E+  +       +H  E+  GI E+  + +++
Sbjct: 76  CPMCMSAIVLSKIDRLYFGARDFKMGAAESCFKLSQDPNLNHKVEVIGGICEEECKALLK 135

Query: 143 DFFKERR 149
            FF++RR
Sbjct: 136 SFFEKRR 142


>gi|303234521|ref|ZP_07321158.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Finegoldia magna BVS033A4]
 gi|302494355|gb|EFL54124.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Finegoldia magna BVS033A4]
          Length = 155

 Score = 82.0 bits (201), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 48/143 (33%), Positives = 76/143 (53%), Gaps = 1/143 (0%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  A+E+A+ A   +E+PVG V V N +II++A N      + T HAE+ AI    +++
Sbjct: 8   FMIKAIEQARIAFDLDEVPVGCVIVKNGEIIAQAYNSVETDNNATMHAELKAINQATQVI 67

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L    +YVTLEPC MC  A+  +RI ++ +GA + K G   +          +H  
Sbjct: 68  GNFRLDNCTMYVTLEPCVMCTGALVYSRIPKVVFGAFDKKRGACGSLLSLNDYEGLNHKI 127

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+   I E+   +++Q FF+  R
Sbjct: 128 EV-KSIMEKECVELMQSFFRRIR 149


>gi|242279729|ref|YP_002991858.1| CMP/dCMP deaminase zinc-binding [Desulfovibrio salexigens DSM 2638]
 gi|242122623|gb|ACS80319.1| CMP/dCMP deaminase zinc-binding [Desulfovibrio salexigens DSM 2638]
          Length = 169

 Score = 82.0 bits (201), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 48/145 (33%), Positives = 72/145 (49%), Gaps = 2/145 (1%)

Query: 7   FMSCALEEAQNAALRNEIPVGA-VAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
            M  A+ EA  A    E+P+GA +     ++++   N      D T HAE+  IR  C+ 
Sbjct: 23  MMDTAIREAFKARRHEEVPIGAALFTAEGELLATGNNTPLTQNDPTGHAEVNCIRNACKN 82

Query: 66  LSQEILPE-VDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
           L    LP    L VTLEPC MC  AI  AR+  + +GA +PK G + +  +   L+  +H
Sbjct: 83  LDNYRLPRGTILVVTLEPCIMCLGAIIHARVGGVVFGAPDPKAGAVVSNLEGTDLSFANH 142

Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149
                 G+ E   ++I+Q FF  +R
Sbjct: 143 KFWTIGGVCENECKEILQSFFLHKR 167


>gi|183602639|ref|ZP_02964003.1| possible cytidine and deoxycytidylate deaminase [Bifidobacterium
           animalis subsp. lactis HN019]
 gi|241191605|ref|YP_002968999.1| Cytosine/adenosine deaminase [Bifidobacterium animalis subsp.
           lactis Bl-04]
 gi|241197010|ref|YP_002970565.1| Cytosine/adenosine deaminase [Bifidobacterium animalis subsp.
           lactis DSM 10140]
 gi|183218057|gb|EDT88704.1| possible cytidine and deoxycytidylate deaminase [Bifidobacterium
           animalis subsp. lactis HN019]
 gi|240249997|gb|ACS46937.1| Cytosine/adenosine deaminase [Bifidobacterium animalis subsp.
           lactis Bl-04]
 gi|240251564|gb|ACS48503.1| Cytosine/adenosine deaminase [Bifidobacterium animalis subsp.
           lactis DSM 10140]
 gi|295794597|gb|ADG34132.1| Cytosine/adenosine deaminase [Bifidobacterium animalis subsp.
           lactis V9]
          Length = 169

 Score = 82.0 bits (201), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 49/143 (34%), Positives = 71/143 (49%), Gaps = 1/143 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  AL +A+ A    ++PVGAV +  + ++I R  N      D  AHAEI+A+R    + 
Sbjct: 25  MGEALAQARMARSAGDVPVGAVVLDAHGEVIGRGRNLRERDADPLAHAEIVAMREAAAVR 84

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  L VTLEPC MCA A    RI R+ +G  + K G   +           H P
Sbjct: 85  GNWNLADCTLVVTLEPCPMCAGACLQTRIGRIVFGGWDAKLGACGSVWDIPRDPHVGHEP 144

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+Y G+ E+    ++ +FF  RR
Sbjct: 145 EVYGGVCERECTALLAEFFHSRR 167


>gi|156186024|gb|ABU55330.1| cytidine and deoxycytidylate deaminase family protein
           [Callosobruchus chinensis]
          Length = 71

 Score = 82.0 bits (201), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 39/72 (54%), Positives = 50/72 (69%), Gaps = 3/72 (4%)

Query: 34  NKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLA 93
           + ++S A N +    D TAHAE+ AI+  C +LS   L + D+YVTLEPC MCA AIS A
Sbjct: 3   SNVVSSAHNIS---NDPTAHAEMFAIKQECELLSTSTLYDSDIYVTLEPCPMCAQAISFA 59

Query: 94  RIRRLYYGASNP 105
           RI+RLY+GA NP
Sbjct: 60  RIKRLYFGAYNP 71


>gi|115727549|ref|XP_789050.2| PREDICTED: similar to deaminase domain containing 1
           [Strongylocentrotus purpuratus]
 gi|115955250|ref|XP_001190121.1| PREDICTED: similar to deaminase domain containing 1
           [Strongylocentrotus purpuratus]
          Length = 201

 Score = 81.6 bits (200), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 48/148 (32%), Positives = 76/148 (51%), Gaps = 8/148 (5%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M+ A+  A+ A  R E+PVG + V  ++II   GN   E K+ T HAEILA+    R  
Sbjct: 12  WMTEAVNMAKQALGRGEVPVGCLLVYEDQIIGTGGNAVNETKNATRHAEILALEEAMRWC 71

Query: 67  S------QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN--GTQFYT 118
                  +E+     L+VT+EPC MCA A+ +  I+++ YG  N + GG  +        
Sbjct: 72  DDKQLEREEVFSRTKLFVTVEPCIMCAGALRIMGIKKVVYGCRNERFGGCGSILSVNSDE 131

Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFK 146
           L +     E   G+    + Q++Q+F+K
Sbjct: 132 LPSIGEPFECKAGLYADTAVQLLQEFYK 159


>gi|289177738|gb|ADC84984.1| tRNA-specific adenosine deaminase [Bifidobacterium animalis subsp.
           lactis BB-12]
          Length = 204

 Score = 81.6 bits (200), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 48/140 (34%), Positives = 70/140 (50%), Gaps = 1/140 (0%)

Query: 11  ALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQE 69
           AL +A+ A    ++PVGAV +  + ++I R  N      D  AHAEI+A+R    +    
Sbjct: 63  ALAQARMARSAGDVPVGAVVLDAHGEVIGRGRNLRERDADPLAHAEIVAMREAAAVRGNW 122

Query: 70  ILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIY 129
            L +  L VTLEPC MCA A    RI R+ +G  + K G   +           H PE+Y
Sbjct: 123 NLADCTLVVTLEPCPMCAGACLQTRIGRIVFGGWDAKLGACGSVWDIPRDPHVGHEPEVY 182

Query: 130 PGISEQRSRQIIQDFFKERR 149
            G+ E+    ++ +FF  RR
Sbjct: 183 GGVCERECTALLAEFFHSRR 202


>gi|78778025|ref|YP_394340.1| guanine deaminase [Sulfurimonas denitrificans DSM 1251]
 gi|78498565|gb|ABB45105.1| Guanine deaminase [Sulfurimonas denitrificans DSM 1251]
          Length = 149

 Score = 81.6 bits (200), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 45/109 (41%), Positives = 63/109 (57%), Gaps = 1/109 (0%)

Query: 3   KGNVFMSCALEEAQNAALRNEI-PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           K ++FM  A++EA     R +  P GAV V + K+I++A NR  +L D TAHAEI AIR 
Sbjct: 2   KHSIFMKKAIKEATFGVERGDGGPFGAVIVKDGKVIAKAHNRVLKLNDATAHAEIEAIRK 61

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI 110
             + L    L E ++Y T  PC MC  AI  A I+ +Y+GA++     I
Sbjct: 62  ASKKLLTYDLSECEIYTTCMPCPMCMGAIRWANIKSVYFGATSQDADDI 110


>gi|256397666|ref|YP_003119230.1| CMP/dCMP deaminase zinc-binding [Catenulispora acidiphila DSM
           44928]
 gi|256363892|gb|ACU77389.1| CMP/dCMP deaminase zinc-binding [Catenulispora acidiphila DSM
           44928]
          Length = 157

 Score = 81.6 bits (200), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 47/141 (33%), Positives = 69/141 (48%), Gaps = 13/141 (9%)

Query: 22  NEIPVGAVAVLNNKIISRAGNRNRELK-DVTAHAEILAIRMGCRILSQEI---------- 70
            ++P+GAV +     +   G   RE + D T HAEI+AIR     L  +           
Sbjct: 15  GDVPIGAVILDPTGTVIAQGRNTREAEGDPTGHAEIVAIRSAAHTLHTKAAQTDPKAPPT 74

Query: 71  --LPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEI 128
             L +  L VTLEPC MCA AI L+R+ R+ +GA +PK G   +          +H+PE+
Sbjct: 75  WRLTDCTLVVTLEPCPMCAGAIVLSRLTRVVFGAWDPKAGAAGSLYDILRDPRLNHTPEV 134

Query: 129 YPGISEQRSRQIIQDFFKERR 149
            PG+ E +    +  FF+  R
Sbjct: 135 IPGVLEPQCHAALNRFFEHHR 155


>gi|325117380|emb|CBZ52932.1| Cytidine and deoxycytidylate deaminase family protein, related
           [Neospora caninum Liverpool]
          Length = 348

 Score = 81.6 bits (200), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 80/152 (52%), Gaps = 12/152 (7%)

Query: 6   VFMSCALEEAQNAALRNEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAIRM-- 61
           +FMS ALEEA++A    E+PVG V V     +++++  N     K+ T H E+ A+    
Sbjct: 181 LFMSAALEEARSALQEGEVPVGCVLVDSRTRQVVAKGRNATNRTKNATRHCELEALDAYM 240

Query: 62  ----GCRILSQEI---LPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGT 114
                 RI   E    +  +DL+VT EPC MCA A+  + I+R++YG  N + GG  +  
Sbjct: 241 ARFPPTRIGDSEAPVDMSSIDLFVTCEPCVMCAVALQCSGIKRVFYGCGNDRFGGCGSVL 300

Query: 115 QFYTLATCHHSP-EIYPGISEQRSRQIIQDFF 145
            F+   + H +  E  PGI  + +  +++ F+
Sbjct: 301 SFHKKLSAHWTGLECCPGIFREEAIDLLRSFY 332


>gi|212716206|ref|ZP_03324334.1| hypothetical protein BIFCAT_01122 [Bifidobacterium catenulatum DSM
           16992]
 gi|212660866|gb|EEB21441.1| hypothetical protein BIFCAT_01122 [Bifidobacterium catenulatum DSM
           16992]
          Length = 149

 Score = 81.6 bits (200), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 49/143 (34%), Positives = 68/143 (47%), Gaps = 1/143 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  A+E A+ AA   E+PVGAV +     +I R  N      D  AHAE+ A+    R L
Sbjct: 7   MGLAIELAREAAAEGEVPVGAVVLDAGGAVIGRGRNLREAHADPLAHAEVKAMTQAARSL 66

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  L VTLEPC MCA A     + R+ +GA + K G   +           H P
Sbjct: 67  GTWNLADCTLIVTLEPCPMCAGACLQTHVGRIVFGAWDAKLGACGSIWDIPRDPHVGHVP 126

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+  G+ E    +++ DFF  +R
Sbjct: 127 EVVGGVCEMECARLMTDFFAGKR 149


>gi|238508831|ref|XP_002385598.1| cytosine deaminase, putative [Aspergillus flavus NRRL3357]
 gi|317157687|ref|XP_001826520.2| cytidine and deoxycytidylate deaminase zinc-binding domain protein
           [Aspergillus oryzae RIB40]
 gi|220688490|gb|EED44843.1| cytosine deaminase, putative [Aspergillus flavus NRRL3357]
          Length = 174

 Score = 81.6 bits (200), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 45/139 (32%), Positives = 72/139 (51%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  AL   + A    E PVG V V +N+I+S   N      + T HAE +A+    R  
Sbjct: 10  FMKQALLMGEKALETGETPVGCVLVYDNQIVSSGMNDTNRSMNGTRHAEFIALERMLRNY 69

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
            + +L    LYVT+EPC MCA+A+   RI+ +Y+G SN + GG  +    +T  +     
Sbjct: 70  PKSLLRSTKLYVTVEPCVMCASALRQYRIQAVYFGCSNERFGGTGSILSLHTDFSIDPPY 129

Query: 127 EIYPGISEQRSRQIIQDFF 145
            +Y G+  + +  +++ F+
Sbjct: 130 PVYGGLFSKEAVMLLRRFY 148


>gi|212535962|ref|XP_002148137.1| tRNA-specific adenosine deaminase subunit TAD2, putative
           [Penicillium marneffei ATCC 18224]
 gi|210070536|gb|EEA24626.1| tRNA-specific adenosine deaminase subunit TAD2, putative
           [Penicillium marneffei ATCC 18224]
          Length = 190

 Score = 81.6 bits (200), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 47/124 (37%), Positives = 62/124 (50%), Gaps = 6/124 (4%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  AL   + A    E PVG V VL  KII    N      + T HAE LAI    +  
Sbjct: 26  FMKEALSMGEKALEAGETPVGCVLVLQGKIIGSGMNDTNRSMNGTRHAEFLAIEEALQTY 85

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
            + I   VDLYVT+EPC MCA+ +    IRR+++G +N + GG        ++ + H  P
Sbjct: 86  PRSIFKHVDLYVTVEPCVMCASLLRQYNIRRVFFGCANERFGGTG------SVLSLHSDP 139

Query: 127 EIYP 130
            I P
Sbjct: 140 CIDP 143


>gi|56757936|gb|AAW27108.1| SJCHGC09107 protein [Schistosoma japonicum]
          Length = 165

 Score = 81.6 bits (200), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 52/155 (33%), Positives = 79/155 (50%), Gaps = 21/155 (13%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR---MGCR 64
           M  A E AQ A   NE+PVG   V   ++I+   N     +D T HAE++ IR     CR
Sbjct: 1   MDVAFELAQEALKCNEVPVGCAFVYKGEVIASGRNEVNATRDATQHAEMITIRHLEQWCR 60

Query: 65  ---ILSQEILPEVDLYVTLEPCTMCAAAISL---ARIRRLYYGASNPKGGGIENGTQFYT 118
              I   ++L E DLYVT+EPC MC AAI     A ++ + YGA N + GG        +
Sbjct: 61  KNEIEFDKVLTECDLYVTVEPCIMCTAAIRFCLPAHLKSITYGARNERFGGCG------S 114

Query: 119 LATCHHSPE------IYPGISEQRSRQIIQDFFKE 147
           + + H+SP         PG+  + + ++++ F+ +
Sbjct: 115 VLSVHNSPSSVPALNCVPGVEAETAVKLLKRFYAQ 149


>gi|325104971|ref|YP_004274625.1| Guanine deaminase [Pedobacter saltans DSM 12145]
 gi|324973819|gb|ADY52803.1| Guanine deaminase [Pedobacter saltans DSM 12145]
          Length = 158

 Score = 81.3 bits (199), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 44/98 (44%), Positives = 59/98 (60%), Gaps = 1/98 (1%)

Query: 7   FMSCALEEA-QNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           FM+ A+E+A +N       P G+V V N KIIS  GN   +  D TAHAEI AIR+ C+ 
Sbjct: 9   FMNLAIEKASENVKTGKGGPFGSVIVKNGKIISATGNTVNKTCDPTAHAEIAAIRLACQE 68

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
           L    L   ++Y + EPC MC +AI  A+I +LYY A+
Sbjct: 69  LKSVTLEGCEIYASCEPCPMCLSAIYWAKIDKLYYAAT 106


>gi|328883836|emb|CCA57075.1| tRNA-specific adenosine-34 deaminase [Streptomyces venezuelae ATCC
           10712]
          Length = 190

 Score = 81.3 bits (199), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 48/143 (33%), Positives = 71/143 (49%), Gaps = 1/143 (0%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
            M  AL EA  A    ++PVGAV +  +  +++RA N      D TAHAE+LA+R     
Sbjct: 48  VMRIALAEADAALPAGDVPVGAVVLGPDGAVLARAHNEREATGDPTAHAEVLALRRAAVA 107

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
             +  L    L VTLEPC MCA A+  +R+ R+ +GA + K G   +          +H 
Sbjct: 108 TGEWRLTGCTLVVTLEPCVMCAGALVQSRVERVVFGAPDEKAGAAGSLWDLVRDRRLNHR 167

Query: 126 PEIYPGISEQRSRQIIQDFFKER 148
           PE+  G+      + +  FF+ R
Sbjct: 168 PEVIQGVLGAECAEQLTAFFRTR 190


>gi|223937372|ref|ZP_03629277.1| CMP/dCMP deaminase zinc-binding [bacterium Ellin514]
 gi|223893923|gb|EEF60379.1| CMP/dCMP deaminase zinc-binding [bacterium Ellin514]
          Length = 155

 Score = 81.3 bits (199), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 39/92 (42%), Positives = 53/92 (57%)

Query: 25  PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84
           P GAV V N KI+ R  N+     D TAHAE++AIR  C+ L    L + +LY + EPC 
Sbjct: 24  PFGAVVVKNGKIVGRGCNQVTSTNDPTAHAEVVAIRDACKRLKTFQLDDCELYTSCEPCP 83

Query: 85  MCAAAISLARIRRLYYGASNPKGGGIENGTQF 116
           MC +AI  AR++++YYG +      IE    F
Sbjct: 84  MCLSAIYWARLKKVYYGNTRKDAAEIEFDDDF 115


>gi|169627373|ref|YP_001701022.1| cytidine/deoxycytidylate deaminase family protein [Mycobacterium
           abscessus ATCC 19977]
 gi|169239340|emb|CAM60368.1| Cytidine/deoxycytidylate deaminase family protein [Mycobacterium
           abscessus]
          Length = 152

 Score = 81.3 bits (199), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 46/130 (35%), Positives = 67/130 (51%), Gaps = 2/130 (1%)

Query: 22  NEIPVGAVA-VLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEI-LPEVDLYVT 79
            ++P+GAV    +   ++RA N    L D TAHAE+LA+R           L    L VT
Sbjct: 23  QDVPIGAVIYAADGTELARAANARERLGDPTAHAEVLALRAAAAKHGDGWRLEGATLAVT 82

Query: 80  LEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139
           +EPCTMCA A+ LAR+ R+ +GA  PK G + +           H PE+  G+ E     
Sbjct: 83  VEPCTMCAGALVLARVGRVVFGAWEPKTGAVGSLWDVVRDRRQAHRPEVRGGVLEHECAA 142

Query: 140 IIQDFFKERR 149
           +++ FF  +R
Sbjct: 143 LLERFFAAKR 152


>gi|15616866|ref|NP_240079.1| hypothetical protein BU255 [Buchnera aphidicola str. APS
           (Acyrthosiphon pisum)]
 gi|219682178|ref|YP_002468562.1| tRNA-specific adenosine deaminase monomer (YfhC) [Buchnera
           aphidicola str. Tuc7 (Acyrthosiphon pisum)]
 gi|14286004|sp|P57343|Y255_BUCAI RecName: Full=Uncharacterized protein BU255
 gi|25303863|pir||E84959 hypothetical protein yfhC [imported] - Buchnera sp. (strain APS)
 gi|10038930|dbj|BAB12965.1| hypothetical protein yfhC [Buchnera aphidicola str. APS
           (Acyrthosiphon pisum)]
 gi|219621911|gb|ACL30067.1| tRNA-specific adenosine deaminase monomer (YfhC) [Buchnera
           aphidicola str. Tuc7 (Acyrthosiphon pisum)]
 gi|311086568|gb|ADP66649.1| tRNA-specific adenosine deaminase monomer (YfhC) [Buchnera
           aphidicola str. TLW03 (Acyrthosiphon pisum)]
 gi|311087149|gb|ADP67229.1| tRNA-specific adenosine deaminase monomer (YfhC) [Buchnera
           aphidicola str. JF99 (Acyrthosiphon pisum)]
 gi|311087683|gb|ADP67762.1| tRNA-specific adenosine deaminase monomer (YfhC) [Buchnera
           aphidicola str. JF98 (Acyrthosiphon pisum)]
          Length = 161

 Score = 81.3 bits (199), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 47/147 (31%), Positives = 75/147 (51%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
           K   +M  AL+ A  A  + EIP+GA+ V   +II    N +    D TAHAEI+A+R  
Sbjct: 5   KDKNWMKIALKYAYYAKEKGEIPIGAILVFKERIIGIGWNSSISKNDPTAHAEIIALRGA 64

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
            + +    L    LYVTL+PC MC  AI  +RI+RL +GA+        +    +     
Sbjct: 65  GKKIKNYRLLNTTLYVTLQPCIMCCGAIIQSRIKRLVFGANCNSSDHRFSLKNLFCDPQK 124

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
            +  +I   + ++    I+ +FF+++R
Sbjct: 125 DYKLDIKKNVMQRECSDILINFFQKKR 151


>gi|121609574|ref|YP_997381.1| CMP/dCMP deaminase [Verminephrobacter eiseniae EF01-2]
 gi|121554214|gb|ABM58363.1| CMP/dCMP deaminase, zinc-binding [Verminephrobacter eiseniae
           EF01-2]
          Length = 482

 Score = 81.3 bits (199), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 50/126 (39%), Positives = 72/126 (57%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  AL +A++AA   E+PVGAV V + ++I+   N      D +AHAEILA+R   R L
Sbjct: 33  WMRQALAQAEDAARAGEVPVGAVVVKDGQLIATGRNAPLARHDPSAHAEILALRAAARRL 92

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L    LYVTLEPC MC+ A+  AR+ RL YGA++P+ G   +    +  A  +H  
Sbjct: 93  GNYRLDGCSLYVTLEPCAMCSGALLQARLARLVYGAADPRTGAAGSVLDLFGDARLNHQT 152

Query: 127 EIYPGI 132
            +  G+
Sbjct: 153 RVQGGV 158


>gi|219681621|ref|YP_002468007.1| hypothetical protein YfhC [Buchnera aphidicola str. 5A
           (Acyrthosiphon pisum)]
 gi|257471309|ref|ZP_05635308.1| hypothetical protein BaphL_01255 [Buchnera aphidicola str. LSR1
           (Acyrthosiphon pisum)]
 gi|219624464|gb|ACL30619.1| hypothetical protein YfhC [Buchnera aphidicola str. 5A
           (Acyrthosiphon pisum)]
          Length = 161

 Score = 80.9 bits (198), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 47/147 (31%), Positives = 75/147 (51%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
           K   +M  AL+ A  A  + EIP+GA+ V   +II    N +    D TAHAEI+A+R  
Sbjct: 5   KDKNWMKIALKYAYYAKEKGEIPIGAILVFKERIIGIGWNSSISKNDPTAHAEIIALRGA 64

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
            + +    L    LYVTL+PC MC  AI  +RI+RL +GA+        +    +     
Sbjct: 65  GKKIKNYRLLNTTLYVTLQPCIMCCGAIIQSRIKRLVFGANCNSSDHRFSLKNLFCNPQK 124

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
            +  +I   + ++    I+ +FF+++R
Sbjct: 125 DYKLDIKKNVMQRECSDILINFFQKKR 151


>gi|227496672|ref|ZP_03926948.1| cytosine deaminase [Actinomyces urogenitalis DSM 15434]
 gi|226833820|gb|EEH66203.1| cytosine deaminase [Actinomyces urogenitalis DSM 15434]
          Length = 154

 Score = 80.9 bits (198), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 51/129 (39%), Positives = 70/129 (54%), Gaps = 3/129 (2%)

Query: 23  EIPVGAVAVLN--NKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80
           E+PVGAV VL+   ++I+ A N      D TAHAE+ A+R     L+   L    L VTL
Sbjct: 27  EVPVGAV-VLDPGGRVIAEAANARETEHDPTAHAEVRALRAAGARLADSHLDGCTLVVTL 85

Query: 81  EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140
           EPCTMCA AI LAR++R+  GA  PK G   +          +H  E+  G+    S  +
Sbjct: 86  EPCTMCAGAIQLARLQRVVLGAWEPKTGACGSVRDVLRDPRANHQVEVVAGVGASESEAL 145

Query: 141 IQDFFKERR 149
           +++FF  RR
Sbjct: 146 LREFFARRR 154


>gi|119179553|ref|XP_001241350.1| hypothetical protein CIMG_08513 [Coccidioides immitis RS]
          Length = 230

 Score = 80.9 bits (198), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 47/139 (33%), Positives = 68/139 (48%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  AL+ A+ A    E PVG V V + K+I R  N      + T HAE LAI    R  
Sbjct: 54  FMREALQMAEQALAIGETPVGCVLVHDGKVIGRGMNDTNRSLNGTRHAEFLAIEEALRSY 113

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
            + I    DLYVT+EPC MCA+ +    IRR+++G  N + GG       ++        
Sbjct: 114 PRSIFRTTDLYVTVEPCIMCASLLRQNYIRRVFFGCVNDRFGGTGGVLNLHSDRAIDPPY 173

Query: 127 EIYPGISEQRSRQIIQDFF 145
            +Y GI    +  +++ F+
Sbjct: 174 TVYGGIFRNEAIMLLRRFY 192


>gi|226528904|ref|NP_001152082.1| tRNA-specific adenosine deaminase [Zea mays]
 gi|195624114|gb|ACG33887.1| tRNA-specific adenosine deaminase [Zea mays]
 gi|195652465|gb|ACG45700.1| tRNA-specific adenosine deaminase [Zea mays]
          Length = 183

 Score = 80.9 bits (198), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 48/113 (42%), Positives = 64/113 (56%), Gaps = 9/113 (7%)

Query: 6   VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
            FM  ALE+A+ A    E+PVG V V + K+IS   N+    ++ T HAE+ AI +  R 
Sbjct: 4   TFMELALEQAKFALDNLEVPVGCVIVEDGKVISSGSNKTNATRNATRHAEMEAIDVLLRE 63

Query: 66  LSQEIL--PEV-------DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109
                L  P+V       DLYVT EPC MCA A+S+  IR +Y+G +N K GG
Sbjct: 64  WQSMGLDQPQVAEKFAGCDLYVTCEPCIMCATALSIIGIREVYFGCANDKFGG 116


>gi|285018425|ref|YP_003376136.1| cytidine / deoxycytidylate deaminase [Xanthomonas albilineans GPE
           PC73]
 gi|283473643|emb|CBA16146.1| putative cytidine / deoxycytidylate deaminase protein [Xanthomonas
           albilineans]
          Length = 165

 Score = 80.9 bits (198), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 54/147 (36%), Positives = 78/147 (53%), Gaps = 6/147 (4%)

Query: 7   FMSCALEEAQNAALR-NEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           +M  AL  A+ A    +EIPVGAV V   + ++    N N    D +AHAEI+A+R   R
Sbjct: 14  WMRHALALAERAEREFDEIPVGAVLVSAEDAVLGEGWNLNIAEHDPSAHAEIVALRQAGR 73

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
            L    LP   LYVTLEPC MCA A+  AR+  L Y A++PK G    G+ F  L    H
Sbjct: 74  RLGNHRLPGSTLYVTLEPCAMCAMALVHARVAELVYAAADPKTGAC--GSVFDLLGDPRH 131

Query: 125 SP--EIYPGISEQRSRQIIQDFFKERR 149
           +   ++  G+    +   + ++F+ +R
Sbjct: 132 NHRVQVRGGVLAAAASVRLTNYFRAKR 158


>gi|91201072|emb|CAJ74130.1| similar to guanine deaminase [Candidatus Kuenenia stuttgartiensis]
          Length = 182

 Score = 80.9 bits (198), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 41/97 (42%), Positives = 58/97 (59%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  A+ +A+   L  + P GA  + NN++IS   N   +  D+TAHAEI+AIR  C+IL
Sbjct: 32  WMRLAINKAKEGILDGQTPFGACIIKNNRLISCVHNHVWKNTDITAHAEIIAIREACKIL 91

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
           +   L    +Y T EPC MC +A   ARI ++ YGAS
Sbjct: 92  NTVDLSGCTIYSTCEPCPMCFSACHWARIAKIVYGAS 128


>gi|21672527|ref|NP_660594.1| hypothetical protein BUsg246 [Buchnera aphidicola str. Sg
           (Schizaphis graminum)]
 gi|25091621|sp|Q8K9R4|Y246_BUCAP RecName: Full=Uncharacterized protein BUsg_246
 gi|21623150|gb|AAM67805.1| hypothetical 20.0 kDa protein [Buchnera aphidicola str. Sg
           (Schizaphis graminum)]
          Length = 151

 Score = 80.9 bits (198), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 55/149 (36%), Positives = 73/149 (48%), Gaps = 13/149 (8%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  AL+ A  A    E+P+GA+ V   KII    N      D TAHAEI+A+R   R +
Sbjct: 9   WMKIALKYAYYAEENGEVPIGAILVFQEKIIGTGWNSVISQNDSTAHAEIIALREAGRNI 68

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS------NPKGGGIENGTQFYTLA 120
               L    LYVTL+PC MC  AI  +RI+RL +GAS      NP    I     F  L 
Sbjct: 69  KNYRLVNTTLYVTLQPCMMCCGAIINSRIKRLVFGASYKDLKKNPFLKKI-----FINLE 123

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
              +  +I   I      +I+ +FFK +R
Sbjct: 124 --KNKLKIKKHIMRNECAKILSNFFKNKR 150


>gi|294495546|ref|YP_003542039.1| CMP/dCMP deaminase zinc-binding protein [Methanohalophilus mahii
           DSM 5219]
 gi|292666545|gb|ADE36394.1| CMP/dCMP deaminase zinc-binding protein [Methanohalophilus mahii
           DSM 5219]
          Length = 150

 Score = 80.9 bits (198), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 48/121 (39%), Positives = 69/121 (57%), Gaps = 5/121 (4%)

Query: 8   MSCALEEAQNAALRNEI--PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M  A+E+A+   +RN +  P GAV V +  +ISRA NR  +  D TAHAEI+AIR+    
Sbjct: 1   MEIAIEQAR-LGMRNNLGGPFGAVIVKDETVISRAHNRVLDSNDPTAHAEIMAIRIASSK 59

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNP--KGGGIENGTQFYTLATCH 123
           L    L E ++Y T  PC MC +A+  ARI+ LYYG +    +  G ++G  +  L   H
Sbjct: 60  LGTFDLSECEIYTTSYPCPMCMSALYWARIKTLYYGTTTTEVEKIGFDDGQIYRALCKGH 119

Query: 124 H 124
           +
Sbjct: 120 N 120


>gi|195110631|ref|XP_001999883.1| GI24773 [Drosophila mojavensis]
 gi|193916477|gb|EDW15344.1| GI24773 [Drosophila mojavensis]
          Length = 160

 Score = 80.9 bits (198), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 47/146 (32%), Positives = 75/146 (51%), Gaps = 9/146 (6%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC--- 63
           FM  AL EA+ A    E+PVG V V N+K+I+R GN     ++ T HAE + I       
Sbjct: 4   FMEEALVEARRARDAGEVPVGCVFVHNDKVIARGGNEVNVHRNATRHAEFICIDATLAYC 63

Query: 64  ---RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              R+ ++++  E+ + VT+EPC MC+AA+    ++ + YG  N + GG    T     A
Sbjct: 64  REKRLPARQVFSEISVVVTVEPCIMCSAALHTLAVKEIIYGCENDRFGG---KTVIDVAA 120

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFK 146
                  I  G+    +  +++DF+K
Sbjct: 121 VVGQQINITGGVRADEAMALLKDFYK 146


>gi|21231608|ref|NP_637525.1| hypothetical protein XCC2169 [Xanthomonas campestris pv. campestris
           str. ATCC 33913]
 gi|66768270|ref|YP_243032.1| hypothetical protein XC_1949 [Xanthomonas campestris pv. campestris
           str. 8004]
 gi|188991407|ref|YP_001903417.1| Putative cytidine / deoxycytidylate deaminase family protein
           [Xanthomonas campestris pv. campestris str. B100]
 gi|21113299|gb|AAM41449.1| conserved hypothetical protein [Xanthomonas campestris pv.
           campestris str. ATCC 33913]
 gi|66573602|gb|AAY49012.1| conserved hypothetical protein [Xanthomonas campestris pv.
           campestris str. 8004]
 gi|167733167|emb|CAP51365.1| Putative cytidine / deoxycytidylate deaminase family protein
           [Xanthomonas campestris pv. campestris]
          Length = 171

 Score = 80.9 bits (198), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 56/147 (38%), Positives = 81/147 (55%), Gaps = 6/147 (4%)

Query: 7   FMSCALEEAQNAALR-NEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           +M+ AL  A+ A    +EIPVGAV V     ++    N N    D +AHAEI+A+R G R
Sbjct: 20  WMTHALRLAERAERDYDEIPVGAVLVDPTGALLGEGWNFNIASHDPSAHAEIMAMREGGR 79

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
            L+   L    LYVTLEPC MCA A+  ARI R+ + AS+PK G    G+ F  LA   H
Sbjct: 80  RLANHRLIGCTLYVTLEPCAMCAMAMIHARIARVVFAASDPKTGAC--GSVFDLLADPRH 137

Query: 125 SP--EIYPGISEQRSRQIIQDFFKERR 149
           +   ++  G+    +   + ++F+ +R
Sbjct: 138 NHRVQVSGGVLAAEAGLRLTNYFRAKR 164


>gi|303320905|ref|XP_003070447.1| Cytidine and deoxycytidylate deaminase zinc-binding domain
           containing protein [Coccidioides posadasii C735 delta
           SOWgp]
 gi|240110143|gb|EER28302.1| Cytidine and deoxycytidylate deaminase zinc-binding domain
           containing protein [Coccidioides posadasii C735 delta
           SOWgp]
 gi|320033053|gb|EFW15002.1| tRNA-specific adenosine deaminase subunit TAD2 [Coccidioides
           posadasii str. Silveira]
          Length = 207

 Score = 80.9 bits (198), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 47/139 (33%), Positives = 68/139 (48%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  AL+ A+ A    E PVG V V + K+I R  N      + T HAE LAI    R  
Sbjct: 31  FMREALQMAEQALAIGETPVGCVLVHDGKVIGRGMNDTNRSLNGTRHAEFLAIEEALRSY 90

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
            + I    DLYVT+EPC MCA+ +    IRR+++G  N + GG       ++        
Sbjct: 91  PRSIFRTTDLYVTVEPCIMCASLLRQNYIRRVFFGCVNDRFGGTGGVLNLHSDRAIDPPY 150

Query: 127 EIYPGISEQRSRQIIQDFF 145
            +Y GI    +  +++ F+
Sbjct: 151 TVYGGIFRNEAIMLLRRFY 169


>gi|238014692|gb|ACR38381.1| unknown [Zea mays]
          Length = 183

 Score = 80.9 bits (198), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 48/112 (42%), Positives = 64/112 (57%), Gaps = 9/112 (8%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  ALE+A+ A    E+PVG V V + K+IS   N+    ++ T HAE+ AI +  R  
Sbjct: 5   FMELALEQAKFALDNLEVPVGCVIVEDGKVISSGSNKTNATRNATRHAEMEAIDVLLREW 64

Query: 67  SQEIL--PEV-------DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109
               L  P+V       DLYVT EPC MCA A+S+  IR +Y+G +N K GG
Sbjct: 65  QSMGLDQPQVAEKFAGCDLYVTCEPCIMCATALSIIGIREVYFGCANDKFGG 116


>gi|333025914|ref|ZP_08453978.1| putative cytidine/deoxycytidine deaminase [Streptomyces sp. Tu6071]
 gi|332745766|gb|EGJ76207.1| putative cytidine/deoxycytidine deaminase [Streptomyces sp. Tu6071]
          Length = 163

 Score = 80.9 bits (198), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 48/129 (37%), Positives = 69/129 (53%), Gaps = 5/129 (3%)

Query: 24  IPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEP 82
           IPVGAV +  +   ++RA N      D TAHAE+LA+R    +  +  L    L VTLEP
Sbjct: 37  IPVGAVVLDASGTELARARNEREATHDPTAHAEVLALRRAAAVRGEWRLTGCTLVVTLEP 96

Query: 83  CTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT--CHHSPEIYPGISEQRSRQI 140
           C MCA A++ +R+ R+ YGA +PK G    G+Q+  L     +H  E+  G+    S  +
Sbjct: 97  CPMCAGALTQSRVERVVYGARDPKAGAA--GSQWDLLRDRRLNHRAEVVEGVLAPESTAL 154

Query: 141 IQDFFKERR 149
           +  FF   R
Sbjct: 155 LDAFFTATR 163


>gi|325921804|ref|ZP_08183621.1| tRNA-adenosine deaminase [Xanthomonas gardneri ATCC 19865]
 gi|325547681|gb|EGD18718.1| tRNA-adenosine deaminase [Xanthomonas gardneri ATCC 19865]
          Length = 165

 Score = 80.5 bits (197), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 55/147 (37%), Positives = 81/147 (55%), Gaps = 6/147 (4%)

Query: 7   FMSCALEEAQNAALR-NEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           +M  AL+ A+ A    +EIPVGA+ V  +  ++    N N    D TAHAEI+A+R   R
Sbjct: 14  WMQRALQLAERAERDYDEIPVGALLVDADGNVLGEGWNFNIASHDPTAHAEIMAMREAGR 73

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
            L+   L    LYVTLEPC MCA A+  ARI R+ + AS+PK G    G+ F  LA   H
Sbjct: 74  RLANHRLIGCTLYVTLEPCAMCAMAMIHARIARVVFAASDPKTGAC--GSVFDLLADPRH 131

Query: 125 SP--EIYPGISEQRSRQIIQDFFKERR 149
           +   ++  G+    +   + ++F+ +R
Sbjct: 132 NHRVQVSGGVLAAEASLRLTNYFRAKR 158


>gi|317055943|ref|YP_004104410.1| CMP/dCMP deaminase zinc-binding protein [Ruminococcus albus 7]
 gi|315448212|gb|ADU21776.1| CMP/dCMP deaminase zinc-binding protein [Ruminococcus albus 7]
          Length = 158

 Score = 80.5 bits (197), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 46/128 (35%), Positives = 69/128 (53%), Gaps = 3/128 (2%)

Query: 24  IPVGAVAVLNN--KIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81
           +PVGAV V  +  +I+ R  NR    +    HAEI+AI    R L    L + +L+VTLE
Sbjct: 24  VPVGAVVVKKSTGEIVGRGFNRREYGRSPLTHAEIVAIDEASRKLGGWRLIDCELFVTLE 83

Query: 82  PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141
           PC MCA A+  +R+ R+ +GA + K G   +    + L   +H PE   G+ E+    ++
Sbjct: 84  PCPMCAGAVINSRVERVVFGAYDKKAGSCGSVVDLFGLPY-NHKPECIGGVLEEECAAVL 142

Query: 142 QDFFKERR 149
            +FFK  R
Sbjct: 143 TEFFKGLR 150


>gi|318041317|ref|ZP_07973273.1| cytidine/deoxycytidylate deaminase family protein [Synechococcus
           sp. CB0101]
          Length = 178

 Score = 80.5 bits (197), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 43/142 (30%), Positives = 70/142 (49%), Gaps = 1/142 (0%)

Query: 6   VFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           ++M   L  A+      EIPV AV +    + +    NR    +    HAE++A++   R
Sbjct: 16  LWMQRLLRRAEAVGCEGEIPVAAVVLDAQGRAVGWGSNRRERDQQPLGHAELMALQQAAR 75

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
           +       +  L VTLEPC MCA A+  AR+ ++ +GA +PK GG+       T  + HH
Sbjct: 76  LRGDWRFNDCTLLVTLEPCPMCAGALVQARVGQVVFGAHDPKRGGLGGVLDLSTSPSAHH 135

Query: 125 SPEIYPGISEQRSRQIIQDFFK 146
           S  +  G+  +R    ++ +FK
Sbjct: 136 SMLVVGGVEAERCATQLERWFK 157


>gi|240281302|gb|EER44805.1| tRNA specific adenosine deaminase [Ajellomyces capsulatus H143]
          Length = 197

 Score = 80.5 bits (197), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 47/129 (36%), Positives = 64/129 (49%), Gaps = 6/129 (4%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           +K   FM  AL+  + A    E PVG V V N++      N   +  + T HAE LAI  
Sbjct: 15  QKHEYFMKKALDMGEEALASGETPVGCVLVHNDEATGSGMNDTNKSMNGTRHAEFLAIEE 74

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
             R   + I  E DLYVT+EPC MCA+A+   +IR +Y+G +N + GG         +  
Sbjct: 75  VLRNYPRSIFRETDLYVTVEPCIMCASALRQYQIRHVYFGCANERFGGTGG------VLN 128

Query: 122 CHHSPEIYP 130
            H  P I P
Sbjct: 129 LHSDPGIDP 137


>gi|239942817|ref|ZP_04694754.1| putative deaminase [Streptomyces roseosporus NRRL 15998]
 gi|291446287|ref|ZP_06585677.1| deaminase [Streptomyces roseosporus NRRL 15998]
 gi|291349234|gb|EFE76138.1| deaminase [Streptomyces roseosporus NRRL 15998]
          Length = 142

 Score = 80.5 bits (197), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 45/126 (35%), Positives = 67/126 (53%), Gaps = 1/126 (0%)

Query: 22  NEIPVGAVAVLNNKIISRAGNRNRELK-DVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80
            ++PVGAV +  +      G+  RE   D TAHAEILA+R     + +  L +  L VTL
Sbjct: 15  GDVPVGAVVLGPDGTELATGHNEREATGDPTAHAEILALRRAAEAVGEWRLTDCTLVVTL 74

Query: 81  EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140
           EPCTMCA A+  +R+ R+ YGA + K G   +          +H PE+  G+ E+   + 
Sbjct: 75  EPCTMCAGALVQSRVARVVYGARDEKAGAAGSLWDVIRDRRLNHRPEVIAGVLERECAEQ 134

Query: 141 IQDFFK 146
           +  FF+
Sbjct: 135 LTAFFR 140


>gi|229817012|ref|ZP_04447294.1| hypothetical protein BIFANG_02267 [Bifidobacterium angulatum DSM
           20098]
 gi|229785757|gb|EEP21871.1| hypothetical protein BIFANG_02267 [Bifidobacterium angulatum DSM
           20098]
          Length = 147

 Score = 80.5 bits (197), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 51/143 (35%), Positives = 71/143 (49%), Gaps = 3/143 (2%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELK-DVTAHAEILAIRMGCRIL 66
           M CALE A  AA   ++PVGA+ +  +  I+  G   RE+  D  AHAE+ A+R      
Sbjct: 7   MRCALELAHRAAEHGDVPVGALVLDAHGHIAGEGWNTREVDGDPLAHAEVAAMREAAE-- 64

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  L VTLEPC MCA A     I R+ +GA + K G   +             P
Sbjct: 65  HGWNLADCTLVVTLEPCPMCAGACIQTHIGRIVFGAWDAKLGACGSVWDIPRDPHVGSVP 124

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+Y G+ E+   Q++ +FF  RR
Sbjct: 125 EVYGGVMERECAQVLSEFFAARR 147


>gi|254384103|ref|ZP_04999448.1| cytidine/deoxycytidine deaminase [Streptomyces sp. Mg1]
 gi|194342993|gb|EDX23959.1| cytidine/deoxycytidine deaminase [Streptomyces sp. Mg1]
          Length = 142

 Score = 80.5 bits (197), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 50/141 (35%), Positives = 74/141 (52%), Gaps = 1/141 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  AL EA  A    ++PVGAV +  + ++++   N      D TAHAE+LA+R     L
Sbjct: 1   MRLALREAARAVPAGDVPVGAVVLGPDGELLATGYNEREATGDPTAHAEVLALRRAAAAL 60

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
            +  LP   L VTLEPC MCA A+  AR+ R+ YGA + K G   +          +H P
Sbjct: 61  GEWRLPGCTLVVTLEPCVMCAGALVQARVARVVYGAGDEKAGAAGSLWDLVRDRRLNHRP 120

Query: 127 EIYPGISEQRSRQIIQDFFKE 147
           E+  G+  +   + + DFF++
Sbjct: 121 EVIRGVLAEECARQLTDFFRD 141


>gi|325680619|ref|ZP_08160161.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Ruminococcus albus 8]
 gi|324107689|gb|EGC01963.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Ruminococcus albus 8]
          Length = 156

 Score = 80.5 bits (197), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 54/151 (35%), Positives = 80/151 (52%), Gaps = 3/151 (1%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNN--KIISRAGNRNRELKDVTAHAEILA 58
           M +  ++M  ALE A  AA  +E+PVGAV V  +  +I+ R  NR    +    HAEI+A
Sbjct: 1   MTRDEMYMRKALELAALAAEEDEVPVGAVVVKKSTGEIVGRGFNRREYGRSPLTHAEIVA 60

Query: 59  IRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
           I    R L    L + +L+VTLEPC MCA A+  +R+ R+ +GA + K G   +    + 
Sbjct: 61  IEQASRKLGGWRLIDCELFVTLEPCPMCAGAVINSRVERVVFGAYDKKAGSCGSVVDLFG 120

Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
           L   +H PE   G+ E+     +  FF+  R
Sbjct: 121 LPY-NHKPECVGGVLEEECAAALSVFFRGLR 150


>gi|139439263|ref|ZP_01772705.1| Hypothetical protein COLAER_01720 [Collinsella aerofaciens ATCC
           25986]
 gi|133775287|gb|EBA39107.1| Hypothetical protein COLAER_01720 [Collinsella aerofaciens ATCC
           25986]
          Length = 593

 Score = 80.5 bits (197), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 51/143 (35%), Positives = 78/143 (54%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FMS AL EA+ AA   E+P+GAV V   +I++RA NR    +D +AHAE  A+    + L
Sbjct: 10  FMSEALAEARAAAAVGEVPIGAVVVRAGEIVARAHNRRELDQDPSAHAEFSALCAAAQSL 69

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
            +  L +  +YVTLEPC MCA  +  AR+ R  YGA++ K G + +       +  +H  
Sbjct: 70  GRWRLSDCTVYVTLEPCCMCAGLMVNARVGRCVYGAADAKAGALGSLYDLNADSRLNHRF 129

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
            +  G+     R+++  +F   R
Sbjct: 130 NVRAGVLADECREVLSSYFSGLR 152


>gi|326488167|dbj|BAJ89922.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 218

 Score = 80.1 bits (196), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 47/112 (41%), Positives = 65/112 (58%), Gaps = 9/112 (8%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI- 65
           FM  AL++A+ A    E+PVG V V N K+I+   NR    ++ T HAE+ AI +  +  
Sbjct: 42  FMELALDQAKFALDNLEVPVGCVIVENGKVIASGSNRTNATRNATRHAEMEAIDVLLQEW 101

Query: 66  ----LSQEILPE----VDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109
               L Q ++ E     DLYVT EPC MCA+A+S+  IR +Y+G  N K GG
Sbjct: 102 QSIGLDQTLVAEKFAGCDLYVTCEPCIMCASALSILGIREVYFGCPNDKFGG 153


>gi|332671974|ref|YP_004454982.1| CMP/dCMP deaminase zinc-binding protein [Cellulomonas fimi ATCC
           484]
 gi|332341012|gb|AEE47595.1| CMP/dCMP deaminase zinc-binding protein [Cellulomonas fimi ATCC
           484]
          Length = 171

 Score = 80.1 bits (196), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 55/145 (37%), Positives = 81/145 (55%), Gaps = 5/145 (3%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  AL+EA+ A    ++PVGAV V  + ++++R  N    L D T HAE++A+R     L
Sbjct: 20  MGLALDEARRAVQSGDVPVGAVVVGPSGEVVARGHNVREALDDPTGHAEVVALRAAADRL 79

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT--CHH 124
            +  L +  L VTLEPC MCA AI LAR+ RL  GA +PK G    G+Q+  +     +H
Sbjct: 80  GRWRLDDCTLVVTLEPCLMCAGAIVLARVPRLVLGAWDPKAGAC--GSQWDVVRDRRLNH 137

Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149
             E+  G+       ++Q FF+ +R
Sbjct: 138 RVEVVGGVRADECGLLLQHFFEAQR 162


>gi|242041093|ref|XP_002467941.1| hypothetical protein SORBIDRAFT_01g036850 [Sorghum bicolor]
 gi|241921795|gb|EER94939.1| hypothetical protein SORBIDRAFT_01g036850 [Sorghum bicolor]
          Length = 183

 Score = 80.1 bits (196), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 48/114 (42%), Positives = 64/114 (56%), Gaps = 9/114 (7%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
             FM  ALE+A+ A    E+PVG V V + K+IS   N+    ++ T HAE+ AI +  R
Sbjct: 3   TAFMEQALEQAKFALDNLEVPVGCVIVEDGKVISSGSNKTNATRNATRHAEMEAIDVLLR 62

Query: 65  I-----LSQEILPE----VDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109
                 L Q  + E     DLYVT EPC MCA A+S+  IR +Y+G +N K GG
Sbjct: 63  EWQSMGLDQTQVAEKFAGCDLYVTCEPCIMCATALSIIGIREVYFGCANDKFGG 116


>gi|268552503|ref|XP_002634234.1| Hypothetical protein CBG01804 [Caenorhabditis briggsae]
 gi|187037916|emb|CAP22833.1| hypothetical protein CBG_01804 [Caenorhabditis briggsae AF16]
          Length = 426

 Score = 80.1 bits (196), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 49/148 (33%), Positives = 85/148 (57%), Gaps = 8/148 (5%)

Query: 6   VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           +F+  A   A+ A  ++E+PVG V V++ + I R  NR  E  D T HAE++A+      
Sbjct: 11  IFLEQAFTLAEEALNQDEVPVGCVFVVDGEEIGRGRNRVNETGDPTRHAEMVAVTEIWSK 70

Query: 66  LSQE---ILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN--GTQFYTLA 120
             +E   +L +  LYV+LEPC MC++A+    IR++ YGA NP+ GG+ +    + Y   
Sbjct: 71  YGEESNNLLKKSVLYVSLEPCIMCSSAMYQLGIRKMVYGAENPRFGGVRSVGSAEKYRE- 129

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKER 148
              ++ EI  G+  +RS  +++ F++++
Sbjct: 130 --ENNIEIVAGVWAERSVGMLKAFYEKQ 155


>gi|303277403|ref|XP_003057995.1| cytidine/deoxycytidylate deaminase family protein [Micromonas
           pusilla CCMP1545]
 gi|226460652|gb|EEH57946.1| cytidine/deoxycytidylate deaminase family protein [Micromonas
           pusilla CCMP1545]
          Length = 201

 Score = 80.1 bits (196), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 49/105 (46%), Positives = 63/105 (60%), Gaps = 3/105 (2%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAIRMGC-R 64
           MS A+EEA+ A+ R E+PVGAV V     ++++   N   E  D TAHAE+  IR G  R
Sbjct: 1   MSLAIEEAKLASRRLEVPVGAVLVRASTGEVLASHHNTVDEEDDPTAHAELKCIRDGAKR 60

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109
           +     L E  LYVTLEPC MCA A+  AR+  + +GA NP  GG
Sbjct: 61  LGGWRYLAETTLYVTLEPCPMCAGAVLNARLGEVVWGAPNPLIGG 105


>gi|237831707|ref|XP_002365151.1| tRNA-specific adenosine deaminase, putative [Toxoplasma gondii
           ME49]
 gi|211962815|gb|EEA98010.1| tRNA-specific adenosine deaminase, putative [Toxoplasma gondii
           ME49]
 gi|221487001|gb|EEE25247.1| tRNA-specific adenosine deaminase, putative [Toxoplasma gondii GT1]
 gi|221506684|gb|EEE32301.1| tRNA-specific adenosine deaminase, putative [Toxoplasma gondii VEG]
          Length = 178

 Score = 80.1 bits (196), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 79/152 (51%), Gaps = 12/152 (7%)

Query: 6   VFMSCALEEAQNAALRNEIPVGAVAVLNN--KIISRAGNRNRELKDVTAHAEILAIRMGC 63
           +FMS ALEEA+ A    E+PVG V V +   +++SR  N     K+ T H E+ A+    
Sbjct: 11  LFMSAALEEARLALKEGEVPVGCVLVDSKTRQVVSRGRNATNRTKNATRHCELEALDAYM 70

Query: 64  RILS---------QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGT 114
            +L          +  L  +DL+VT EPC MCA A+  + ++R++YG  N + GG  +  
Sbjct: 71  ALLPPPNIGGVEPRVDLSSIDLFVTCEPCVMCAVALQCSGVKRVFYGCGNDRFGGCGSVL 130

Query: 115 QFYT-LATCHHSPEIYPGISEQRSRQIIQDFF 145
            F+  L+      E Y GI  + +  +++ F+
Sbjct: 131 SFHKRLSEQWKGLECYSGIFREEAIDLLRSFY 162


>gi|227502417|ref|ZP_03932466.1| nucleoside deaminase [Corynebacterium accolens ATCC 49725]
 gi|306834972|ref|ZP_07468023.1| tRNA-specific adenosine deaminase [Corynebacterium accolens ATCC
           49726]
 gi|227076786|gb|EEI14749.1| nucleoside deaminase [Corynebacterium accolens ATCC 49725]
 gi|304569138|gb|EFM44652.1| tRNA-specific adenosine deaminase [Corynebacterium accolens ATCC
           49726]
          Length = 147

 Score = 80.1 bits (196), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 48/130 (36%), Positives = 67/130 (51%), Gaps = 2/130 (1%)

Query: 22  NEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEI-LPEVDLYVT 79
            ++PVGAV      + ++   NR  +L+D TAHAEI AIR   RI      L   +L VT
Sbjct: 14  GDVPVGAVLYDATGRELATGVNRREQLRDPTAHAEIEAIRQAVRIHGDGWRLIGCELVVT 73

Query: 80  LEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139
           LEPC MCA A+  ARI  L +GA  PK G   +        T   +P++  G+ E+    
Sbjct: 74  LEPCAMCAGALQAARISSLVFGAFEPKTGACGSLVDVLRAPTAPFTPQVRGGVLEEDCVA 133

Query: 140 IIQDFFKERR 149
           +++ FF   R
Sbjct: 134 LLEKFFTTLR 143


>gi|227549638|ref|ZP_03979687.1| nucleoside deaminase [Corynebacterium lipophiloflavum DSM 44291]
 gi|227078294|gb|EEI16257.1| nucleoside deaminase [Corynebacterium lipophiloflavum DSM 44291]
          Length = 177

 Score = 80.1 bits (196), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 55/145 (37%), Positives = 74/145 (51%), Gaps = 6/145 (4%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M+ ALE A+      ++PVGAV      + +    NR     D TAHAE+ A+R   R L
Sbjct: 9   MARALEVARTTP-PGDVPVGAVIYDALGREVGHGVNRREASGDPTAHAEVEALRAAARTL 67

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L   +L VTLEPCTMCA AI  AR+R L +GA  PK G +  G+ F  L    H  
Sbjct: 68  GAWRLDGCELVVTLEPCTMCAGAILGARVRSLVFGAFEPKTGAV--GSLFDALRDPRHLH 125

Query: 127 --EIYPGISEQRSRQIIQDFFKERR 149
             E+  G+ E     ++ +FF + R
Sbjct: 126 IVEVRAGVREAECAALLTEFFADLR 150


>gi|195349159|ref|XP_002041114.1| GM15219 [Drosophila sechellia]
 gi|194122719|gb|EDW44762.1| GM15219 [Drosophila sechellia]
          Length = 160

 Score = 80.1 bits (196), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 48/146 (32%), Positives = 77/146 (52%), Gaps = 9/146 (6%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEIL---AIRMGC 63
           FM  AL EA+ A    E+PVG V V   K+++R GN     ++ T HAE +   AI   C
Sbjct: 4   FMEEALVEARRARDAGEVPVGCVFVHGGKVVARGGNEVNVHRNATRHAEFICIDAILATC 63

Query: 64  R---ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
           R   + ++++  E+ + VT+EPC MC+AA+    ++ + YG  N + GG    T     A
Sbjct: 64  REKRLPARQLFSEITVVVTVEPCIMCSAALHTLGVKEIIYGCENDRFGG---KTVVDVAA 120

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFK 146
              H  EI  G+    +  ++++F+K
Sbjct: 121 VVGHRIEITGGVRADEAMALLKEFYK 146


>gi|77736501|ref|NP_001029952.1| tRNA-specific adenosine deaminase 2 [Bos taurus]
 gi|75057795|sp|Q5E9J7|ADAT2_BOVIN RecName: Full=tRNA-specific adenosine deaminase 2; AltName:
           Full=Deaminase domain-containing protein 1; AltName:
           Full=tRNA-specific adenosine-34 deaminase subunit ADAT2
 gi|59858211|gb|AAX08940.1| deaminase domain containing 1 [Bos taurus]
 gi|296483948|gb|DAA26063.1| tRNA-specific adenosine deaminase 2 [Bos taurus]
          Length = 191

 Score = 80.1 bits (196), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 47/149 (31%), Positives = 80/149 (53%), Gaps = 8/149 (5%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG---C 63
           +M  A++ A++A    E+PVG + V NN+++ +  N   + K+ T HAE++AI      C
Sbjct: 25  WMEQAMQMAKDALDNTEVPVGCLMVYNNEVVGKGRNEVNQTKNATRHAEMVAIDQALDWC 84

Query: 64  RILSQ---EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT-- 118
           R   +   E+     LYVT+EPC MCAAA+ L RI  + YG  N + GG  +     +  
Sbjct: 85  RRRGRSPSEVFEHTVLYVTVEPCIMCAAALRLMRIPLVVYGCQNERFGGCGSVLDIASAD 144

Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKE 147
           L +     +  PG   + + ++++ F+K+
Sbjct: 145 LPSTGKPFQCTPGYRAEEAVEMLKTFYKQ 173


>gi|66806365|ref|XP_636905.1| adenosine deaminase, tRNA-specific [Dictyostelium discoideum AX4]
 gi|60465302|gb|EAL63394.1| adenosine deaminase, tRNA-specific [Dictyostelium discoideum AX4]
          Length = 254

 Score = 79.7 bits (195), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 44/117 (37%), Positives = 63/117 (53%), Gaps = 10/117 (8%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI------- 59
           FM  A+EE   A    E+PV  V V   +II+R  N+    K+ T HAE+ A        
Sbjct: 50  FMEAAIEEGYKALKEGEVPVACVIVYKGEIIARGSNKTNIKKNGTRHAELEAFDQIFLNK 109

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116
            +  R     +L E DLYVT+EPC MC+ A+   +I+R+++G  N K GG  NG+ +
Sbjct: 110 ELNDR-FKDSLLEECDLYVTVEPCLMCSVALQFCKIKRVFFGCHNDKFGG--NGSVY 163


>gi|195391484|ref|XP_002054390.1| GJ24425 [Drosophila virilis]
 gi|194152476|gb|EDW67910.1| GJ24425 [Drosophila virilis]
          Length = 160

 Score = 79.7 bits (195), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 46/146 (31%), Positives = 76/146 (52%), Gaps = 9/146 (6%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC--- 63
           FM  AL EA+ A    E+PVG V V N+K+I+R GN     ++ T HAE + I       
Sbjct: 4   FMEDALVEARRARDAGEVPVGCVFVHNDKVIARGGNEVNVHRNATRHAEFICIDATLAYC 63

Query: 64  ---RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              R+ ++++  E+ + VT+EPC MC+AA+    ++ + YG  N + GG    T     A
Sbjct: 64  REKRLPARQVFSEISVVVTVEPCIMCSAALHTLAVKEIIYGCENDRFGG---KTVIDVAA 120

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFK 146
                  I  G+  + +  ++++F+K
Sbjct: 121 VVGQRINITGGVRSEEAMALLKEFYK 146


>gi|239989276|ref|ZP_04709940.1| putative deaminase [Streptomyces roseosporus NRRL 11379]
          Length = 174

 Score = 79.7 bits (195), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 45/126 (35%), Positives = 67/126 (53%), Gaps = 1/126 (0%)

Query: 22  NEIPVGAVAVLNNKIISRAGNRNRELK-DVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80
            ++PVGAV +  +      G+  RE   D TAHAEILA+R     + +  L +  L VTL
Sbjct: 47  GDVPVGAVVLGPDGTELATGHNEREATGDPTAHAEILALRRAAEAVGEWRLTDCTLVVTL 106

Query: 81  EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140
           EPCTMCA A+  +R+ R+ YGA + K G   +          +H PE+  G+ E+   + 
Sbjct: 107 EPCTMCAGALVQSRVARVVYGARDEKAGAAGSLWDVIRDRRLNHRPEVIAGVLERECAEQ 166

Query: 141 IQDFFK 146
           +  FF+
Sbjct: 167 LTAFFR 172


>gi|118464690|ref|YP_879612.1| cytidine and deoxycytidylate deaminase family protein
           [Mycobacterium avium 104]
 gi|254773334|ref|ZP_05214850.1| cytidine and deoxycytidylate deaminase family protein
           [Mycobacterium avium subsp. avium ATCC 25291]
 gi|118165977|gb|ABK66874.1| cytidine and deoxycytidylate deaminase family protein
           [Mycobacterium avium 104]
          Length = 152

 Score = 79.7 bits (195), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 56/145 (38%), Positives = 77/145 (53%), Gaps = 3/145 (2%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
            +  AL  A  A  R+ +P+GAV V  +   ++RA N    L D TAHAEILA+R     
Sbjct: 7   LIRSALAVAATAGPRD-VPIGAVVVGADGTELARAVNAREALGDPTAHAEILALRAAAAA 65

Query: 66  LSQEI-LPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
           L     L    L VT+EPCTMCA A+ LARI RL +GA  PK G + +          +H
Sbjct: 66  LGDGWRLEGATLAVTVEPCTMCAGALVLARIARLVFGAWEPKTGAVGSLWDVVRDRRLNH 125

Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149
            PE+  G+ E+    +++ FF  +R
Sbjct: 126 RPEVRGGVLERECAALLEGFFARQR 150


>gi|78779266|ref|YP_397378.1| tRNA-adenosine deaminase [Prochlorococcus marinus str. MIT 9312]
 gi|78712765|gb|ABB49942.1| tRNA-adenosine deaminase [Prochlorococcus marinus str. MIT 9312]
          Length = 171

 Score = 79.7 bits (195), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 45/128 (35%), Positives = 67/128 (52%), Gaps = 1/128 (0%)

Query: 23  EIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81
           E+P+ ++ +    + I R  NR    KD   HAEI+A+R    I +     E      LE
Sbjct: 41  ELPISSIILDERGRCIGRGVNRRSVNKDPLGHAEIMALRQASLIKNDWRFNECITITNLE 100

Query: 82  PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141
           PCTMCA+A+  AR+ ++ +GA + K GG+          + HH  EI  GI E+   QI+
Sbjct: 101 PCTMCASALIQARMGKVVFGAYDKKRGGLGGSIDLSKHKSSHHKMEIVGGILEEECSQIL 160

Query: 142 QDFFKERR 149
           Q +FK+ R
Sbjct: 161 QLWFKKLR 168


>gi|15610888|ref|NP_218269.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis
           H37Rv]
 gi|15843372|ref|NP_338409.1| cytidine and deoxycytidylate deaminase family protein
           [Mycobacterium tuberculosis CDC1551]
 gi|31794922|ref|NP_857415.1| cytidine/deoxycytidylate deaminase [Mycobacterium bovis AF2122/97]
 gi|121639666|ref|YP_979890.1| putative cytidine/deoxycytidylate deaminase [Mycobacterium bovis
           BCG str. Pasteur 1173P2]
 gi|148663618|ref|YP_001285141.1| cytidine and deoxycytidylate deaminase family protein
           [Mycobacterium tuberculosis H37Ra]
 gi|148824957|ref|YP_001289711.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis F11]
 gi|167970913|ref|ZP_02553190.1| hypothetical cytidine/deoxycytidylate deaminase [Mycobacterium
           tuberculosis H37Ra]
 gi|215405807|ref|ZP_03417988.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis
           02_1987]
 gi|215413680|ref|ZP_03422348.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis
           94_M4241A]
 gi|215424998|ref|ZP_03422917.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis T92]
 gi|215448096|ref|ZP_03434848.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis T85]
 gi|218755535|ref|ZP_03534331.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis GM
           1503]
 gi|219559836|ref|ZP_03538912.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis T17]
 gi|224992162|ref|YP_002646851.1| putative cytidine/deoxycytidylate deaminase [Mycobacterium bovis
           BCG str. Tokyo 172]
 gi|253800799|ref|YP_003033800.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis KZN
           1435]
 gi|254366297|ref|ZP_04982341.1| hypothetical cytidine/deoxycytidylate deaminase [Mycobacterium
           tuberculosis str. Haarlem]
 gi|254552866|ref|ZP_05143313.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis
           '98-R604 INH-RIF-EM']
 gi|260184675|ref|ZP_05762149.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis
           CPHL_A]
 gi|260198800|ref|ZP_05766291.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis T46]
 gi|260202955|ref|ZP_05770446.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis K85]
 gi|289441188|ref|ZP_06430932.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis T46]
 gi|289445351|ref|ZP_06435095.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis
           CPHL_A]
 gi|289556017|ref|ZP_06445227.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis KZN
           605]
 gi|289571998|ref|ZP_06452225.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis T17]
 gi|289572402|ref|ZP_06452629.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis K85]
 gi|289747592|ref|ZP_06506970.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis
           02_1987]
 gi|289748271|ref|ZP_06507649.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis T92]
 gi|289759914|ref|ZP_06519292.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis T85]
 gi|289763934|ref|ZP_06523312.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis GM
           1503]
 gi|294995336|ref|ZP_06801027.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis 210]
 gi|297636433|ref|ZP_06954213.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis KZN
           4207]
 gi|297733427|ref|ZP_06962545.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis KZN
           R506]
 gi|298527225|ref|ZP_07014634.1| hypothetical cytidine/deoxycytidylate deaminase [Mycobacterium
           tuberculosis 94_M4241A]
 gi|306778112|ref|ZP_07416449.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis
           SUMu001]
 gi|306778644|ref|ZP_07416981.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis
           SUMu002]
 gi|306786666|ref|ZP_07424988.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis
           SUMu003]
 gi|306791033|ref|ZP_07429355.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis
           SUMu004]
 gi|306791352|ref|ZP_07429654.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis
           SUMu005]
 gi|306795417|ref|ZP_07433719.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis
           SUMu006]
 gi|306801392|ref|ZP_07438060.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis
           SUMu008]
 gi|306805598|ref|ZP_07442266.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis
           SUMu007]
 gi|306969995|ref|ZP_07482656.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis
           SUMu009]
 gi|306974229|ref|ZP_07486890.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis
           SUMu010]
 gi|307081937|ref|ZP_07491107.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis
           SUMu011]
 gi|307086550|ref|ZP_07495663.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis
           SUMu012]
 gi|313660758|ref|ZP_07817638.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis KZN
           V2475]
 gi|2960176|emb|CAA18074.1| POSSIBLE CYTIDINE/DEOXYCYTIDYLATE DEAMINASE [Mycobacterium
           tuberculosis H37Rv]
 gi|13883737|gb|AAK48223.1| cytidine and deoxycytidylate deaminase family protein
           [Mycobacterium tuberculosis CDC1551]
 gi|31620520|emb|CAD95964.1| POSSIBLE CYTIDINE/DEOXYCYTIDYLATE DEAMINASE [Mycobacterium bovis
           AF2122/97]
 gi|121495314|emb|CAL73801.1| Possible cytidine/deoxycytidylate deaminase [Mycobacterium bovis
           BCG str. Pasteur 1173P2]
 gi|134151809|gb|EBA43854.1| hypothetical cytidine/deoxycytidylate deaminase [Mycobacterium
           tuberculosis str. Haarlem]
 gi|148507770|gb|ABQ75579.1| cytidine and deoxycytidylate deaminase family protein
           [Mycobacterium tuberculosis H37Ra]
 gi|148723484|gb|ABR08109.1| hypothetical cytidine/deoxycytidylate deaminase [Mycobacterium
           tuberculosis F11]
 gi|224775277|dbj|BAH28083.1| putative cytidine/deoxycytidylate deaminase [Mycobacterium bovis
           BCG str. Tokyo 172]
 gi|253322302|gb|ACT26905.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis KZN
           1435]
 gi|289414107|gb|EFD11347.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis T46]
 gi|289418309|gb|EFD15510.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis
           CPHL_A]
 gi|289440649|gb|EFD23142.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis KZN
           605]
 gi|289536833|gb|EFD41411.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis K85]
 gi|289545752|gb|EFD49400.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis T17]
 gi|289688120|gb|EFD55608.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis
           02_1987]
 gi|289688858|gb|EFD56287.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis T92]
 gi|289711440|gb|EFD75456.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis GM
           1503]
 gi|289715478|gb|EFD79490.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis T85]
 gi|298497019|gb|EFI32313.1| hypothetical cytidine/deoxycytidylate deaminase [Mycobacterium
           tuberculosis 94_M4241A]
 gi|308213634|gb|EFO73033.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis
           SUMu001]
 gi|308328367|gb|EFP17218.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis
           SUMu002]
 gi|308328772|gb|EFP17623.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis
           SUMu003]
 gi|308332614|gb|EFP21465.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis
           SUMu004]
 gi|308340105|gb|EFP28956.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis
           SUMu005]
 gi|308344093|gb|EFP32944.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis
           SUMu006]
 gi|308347895|gb|EFP36746.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis
           SUMu007]
 gi|308351763|gb|EFP40614.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis
           SUMu008]
 gi|308352546|gb|EFP41397.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis
           SUMu009]
 gi|308356497|gb|EFP45348.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis
           SUMu010]
 gi|308360445|gb|EFP49296.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis
           SUMu011]
 gi|308364027|gb|EFP52878.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis
           SUMu012]
 gi|323717617|gb|EGB26819.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis
           CDC1551A]
 gi|326905590|gb|EGE52523.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis
           W-148]
 gi|328460526|gb|AEB05949.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis KZN
           4207]
          Length = 152

 Score = 79.7 bits (195), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 44/114 (38%), Positives = 62/114 (54%), Gaps = 1/114 (0%)

Query: 37  ISRAGNRNRELKDVTAHAEILAIRMGCRILSQEI-LPEVDLYVTLEPCTMCAAAISLARI 95
           ++RA N    L D TAHAEILA+R+   +L     L    L VT+EPCTMCA A+ LAR+
Sbjct: 37  LARAVNAREALGDPTAHAEILAMRLAAGVLGDGWRLEGTTLAVTVEPCTMCAGALVLARV 96

Query: 96  RRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
            RL +GA  PK G + +          +H PE+  G+  +     ++ FF  +R
Sbjct: 97  ARLVFGAWEPKTGAVGSLWDVVRDRRLNHRPEVRGGVLARECAAPLEAFFARQR 150


>gi|308802662|ref|XP_003078644.1| putative deaminase (ISS) [Ostreococcus tauri]
 gi|116057097|emb|CAL51524.1| putative deaminase (ISS) [Ostreococcus tauri]
          Length = 247

 Score = 79.7 bits (195), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 57/161 (35%), Positives = 83/161 (51%), Gaps = 21/161 (13%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNN--KIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M  ALE A+    R E+P+GAV V N+  ++++   N      D TAHAE+ AIRMG   
Sbjct: 75  MRRALEIARFGGARGEVPIGAVIVENDTGRVVAACANACERDGDPTAHAELRAIRMGAET 134

Query: 66  L-SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL----- 119
           L +   L +  +YVTLEPC MCA  I  AR+ R+ YGA N   G   +G+    L     
Sbjct: 135 LGNWRHLRKTTMYVTLEPCAMCAGGILQARVGRVVYGAKNALLGA--DGSWVSVLRKSDA 192

Query: 120 -------ATCHH--SP--EIYPGISEQRSRQIIQDFFKERR 149
                   T  H  SP  ++  G+  + +  ++++FF+ RR
Sbjct: 193 VDESAATTTRPHAFSPDLDVTGGVLAEETGALMKEFFRARR 233


>gi|257138794|ref|ZP_05587056.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia
           thailandensis E264]
          Length = 187

 Score = 79.7 bits (195), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 48/126 (38%), Positives = 69/126 (54%)

Query: 24  IPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83
           +PVGAV V  +++I+R  N      D +AHAE+ A+R   R L    +P  +LYVTLEPC
Sbjct: 42  VPVGAVIVRGDEVIARGFNHPIGGHDPSAHAEMAALRAAARALRNYRMPGCELYVTLEPC 101

Query: 84  TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQD 143
            MC+ AI  ARI R+ +GA +PK G   +    +  A  +H   +  G+        ++ 
Sbjct: 102 LMCSGAIMHARIARVVFGAPDPKTGACGSVVDAFADARLNHHTTVEGGVLADECGAALKS 161

Query: 144 FFKERR 149
           FF ERR
Sbjct: 162 FFAERR 167


>gi|125975000|ref|YP_001038910.1| guanine deaminase [Clostridium thermocellum ATCC 27405]
 gi|256005114|ref|ZP_05430084.1| CMP/dCMP deaminase zinc-binding [Clostridium thermocellum DSM 2360]
 gi|281418582|ref|ZP_06249601.1| CMP/dCMP deaminase zinc-binding [Clostridium thermocellum JW20]
 gi|125715225|gb|ABN53717.1| Guanine deaminase [Clostridium thermocellum ATCC 27405]
 gi|255990965|gb|EEU01077.1| CMP/dCMP deaminase zinc-binding [Clostridium thermocellum DSM 2360]
 gi|281407666|gb|EFB37925.1| CMP/dCMP deaminase zinc-binding [Clostridium thermocellum JW20]
 gi|316939161|gb|ADU73195.1| CMP/dCMP deaminase zinc-binding protein [Clostridium thermocellum
           DSM 1313]
          Length = 154

 Score = 79.7 bits (195), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 44/105 (41%), Positives = 64/105 (60%), Gaps = 1/105 (0%)

Query: 7   FMSCALEEAQNAALRNEI-PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           FM  A++EA +   +N   P GAV V +N+II+RA N   +  D T HAE++AIR   + 
Sbjct: 4   FMKEAVKEAVSGMRQNHGGPFGAVIVKDNEIIARAHNEVIKNNDPTDHAEMIAIRKAAKK 63

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI 110
           LS+  L + +LY + EPC MC AAI  A+I+++YYG +      I
Sbjct: 64  LSRFDLGDCELYSSCEPCPMCFAAIHWAKIKKVYYGCTREDAAKI 108


>gi|21242782|ref|NP_642364.1| hypothetical protein XAC2038 [Xanthomonas axonopodis pv. citri str.
           306]
 gi|21108264|gb|AAM36900.1| conserved hypothetical protein [Xanthomonas axonopodis pv. citri
           str. 306]
          Length = 169

 Score = 79.7 bits (195), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 55/147 (37%), Positives = 81/147 (55%), Gaps = 6/147 (4%)

Query: 7   FMSCALEEAQNAALR-NEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           +M  AL+ A+ A    +EIPVGAV V     ++    N N    D +AHAEI+A+R   R
Sbjct: 18  WMQHALQLAERAERDYDEIPVGAVLVDAQGNVLGEGWNFNIASHDPSAHAEIVAMREAGR 77

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
            L+   L    LYVTLEPC MCA A+  ARI R+ + AS+PK G    G+ F  LA   H
Sbjct: 78  RLANHRLIGCTLYVTLEPCAMCAMAMIHARIARVVFAASDPKTGAC--GSVFDLLADPRH 135

Query: 125 SP--EIYPGISEQRSRQIIQDFFKERR 149
           +   ++  G+   ++   + ++F+ +R
Sbjct: 136 NHRVQVCGGVLAAQASLRLTNYFRAKR 162


>gi|167836996|ref|ZP_02463879.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia
           thailandensis MSMB43]
          Length = 194

 Score = 79.3 bits (194), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 48/126 (38%), Positives = 69/126 (54%)

Query: 24  IPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83
           +PVGAV V  +++I+R  N      D +AHAE+ A+R   R L    +P  +LYVTLEPC
Sbjct: 49  VPVGAVIVRGDEVIARGFNHPIGGHDPSAHAEMAALRAAARALRNYRMPGCELYVTLEPC 108

Query: 84  TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQD 143
            MC+ AI  ARI R+ +GA +PK G   +    +  A  +H   +  G+        ++ 
Sbjct: 109 LMCSGAIMHARIARVVFGAPDPKTGACGSVVDAFADARLNHHTTVEGGVLADECGAALKS 168

Query: 144 FFKERR 149
           FF ERR
Sbjct: 169 FFAERR 174


>gi|296090277|emb|CBI40096.3| unnamed protein product [Vitis vinifera]
          Length = 205

 Score = 79.3 bits (194), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 46/115 (40%), Positives = 66/115 (57%), Gaps = 15/115 (13%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  A+++A+ A    E+PVG V V + K+I+   NR  E ++ T HAE+ AI +   +L
Sbjct: 30  FMELAIQQAKLALDSLEVPVGCVIVEDGKLIATGRNRTTETRNATRHAEMEAIDV---LL 86

Query: 67  SQ------------EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109
            Q            EI  +  LYVT EPC MCAA++S+  I+ +YYG +N K GG
Sbjct: 87  EQWQKNGLSKLEVAEIFSKCSLYVTCEPCIMCAASLSILGIKEVYYGCANDKFGG 141


>gi|23097839|ref|NP_691305.1| hypothetical protein OB0384 [Oceanobacillus iheyensis HTE831]
 gi|22776063|dbj|BAC12340.1| hypothetical conserved protein [Oceanobacillus iheyensis HTE831]
          Length = 159

 Score = 79.3 bits (194), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 44/105 (41%), Positives = 57/105 (54%)

Query: 6   VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           +FMS A+E A +   +   P GAV + +NKII+   N+     D TAHAE+ AIR  C  
Sbjct: 9   LFMSKAIELAVSNISQGGGPFGAVIIKDNKIIAEGTNQVTNYNDPTAHAEVQAIRQACEK 68

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI 110
           LS   L    LY + EPC MC  AI  AR+  +YYGA+      I
Sbjct: 69  LSTFELKGCTLYTSCEPCPMCLGAIYWARVDAVYYGANRKDAAKI 113


>gi|299138415|ref|ZP_07031594.1| CMP/dCMP deaminase zinc-binding [Acidobacterium sp. MP5ACTX8]
 gi|298599661|gb|EFI55820.1| CMP/dCMP deaminase zinc-binding [Acidobacterium sp. MP5ACTX8]
          Length = 182

 Score = 79.3 bits (194), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 49/131 (37%), Positives = 67/131 (51%), Gaps = 5/131 (3%)

Query: 24  IPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQE--ILPE--VDLYV 78
           +PVGA+ V    +I+SR  N+     D TAHAEI+A+R     L     + PE    LY 
Sbjct: 29  VPVGAIIVSPTGEIVSRGNNQVLRTNDPTAHAEIVALRAAGLALDNYRLLTPEGGCTLYC 88

Query: 79  TLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSR 138
           TLEPC MCA AI  ARI RL + A +PK G   +          +H  E+   I  +   
Sbjct: 89  TLEPCAMCAGAILHARIARLVFAARDPKAGACGSVLSVMNHPALNHRVEVVESILTEECS 148

Query: 139 QIIQDFFKERR 149
            ++ +FF+ RR
Sbjct: 149 AMLTNFFRARR 159


>gi|294625308|ref|ZP_06703945.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 11122]
 gi|294665062|ref|ZP_06730368.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 10535]
 gi|292600377|gb|EFF44477.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 11122]
 gi|292605180|gb|EFF48525.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 10535]
          Length = 169

 Score = 79.3 bits (194), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 55/147 (37%), Positives = 80/147 (54%), Gaps = 6/147 (4%)

Query: 7   FMSCALEEAQNAALR-NEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           +M  AL+ A+ A    +EIPVGAV V     ++    N N    D +AHAEI+A+R   R
Sbjct: 18  WMQHALQLAERAERDYDEIPVGAVLVDAQGNVLGEGWNFNIASHDPSAHAEIVAMREAGR 77

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
            L+   L    LYVTLEPC MCA A+  ARI R+ + AS+PK G    G+ F  LA   H
Sbjct: 78  RLANHRLIGCTLYVTLEPCAMCAMAMIHARIARVVFAASDPKTGAC--GSVFDLLADPRH 135

Query: 125 SP--EIYPGISEQRSRQIIQDFFKERR 149
           +   ++  G+    +   + ++F+ +R
Sbjct: 136 NHRVQVSGGVLAAEASLRLTNYFRAKR 162


>gi|269955016|ref|YP_003324805.1| CMP/dCMP deaminase zinc-binding protein [Xylanimonas
           cellulosilytica DSM 15894]
 gi|269303697|gb|ACZ29247.1| CMP/dCMP deaminase zinc-binding protein [Xylanimonas
           cellulosilytica DSM 15894]
          Length = 190

 Score = 79.3 bits (194), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 48/146 (32%), Positives = 70/146 (47%), Gaps = 1/146 (0%)

Query: 5   NVFMSCALEEAQNA-ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
           +  M  AL EA +A A  +      V   + +++    NR  E  D TAHAE+LA+R   
Sbjct: 42  DALMGMALHEATHALASGDVPVGAVVVGPDGRLLGTGRNRREETGDPTAHAEVLALRQAA 101

Query: 64  RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123
               +  L    L VTLEPC MCA A+  AR+ RL  GA +PK G   +          +
Sbjct: 102 LSRREWRLEGCTLVVTLEPCVMCAGALVAARVHRLVIGAWDPKAGATGSVWDLVRDQRAN 161

Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149
           H+ E+  G+ E     +++ FF+  R
Sbjct: 162 HAVEVVGGVREHECGAMLRAFFESHR 187


>gi|225352824|ref|ZP_03743847.1| hypothetical protein BIFPSEUDO_04457 [Bifidobacterium
           pseudocatenulatum DSM 20438]
 gi|225156335|gb|EEG69904.1| hypothetical protein BIFPSEUDO_04457 [Bifidobacterium
           pseudocatenulatum DSM 20438]
          Length = 149

 Score = 79.3 bits (194), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 49/143 (34%), Positives = 69/143 (48%), Gaps = 1/143 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELK-DVTAHAEILAIRMGCRIL 66
           M  A+E A+ AA   E+PVGAV +     +  +G   RE   D  AHAE+ A+    R L
Sbjct: 7   MELAIELAREAAAEGEVPVGAVVLDAGGAVIGSGRNLREAHADPLAHAEVKAMTQAARSL 66

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  L VTLEPC MCA A     + R+ +GA + K G   +           H P
Sbjct: 67  GTWNLADCTLIVTLEPCPMCAGACLQTHVGRIVFGAWDAKLGACGSIWDIPRDPHVGHVP 126

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+  G+ E    +++ DFF  +R
Sbjct: 127 EVIGGVRESECARLMTDFFAGKR 149


>gi|167619629|ref|ZP_02388260.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia
           thailandensis Bt4]
          Length = 194

 Score = 79.3 bits (194), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 48/126 (38%), Positives = 69/126 (54%)

Query: 24  IPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83
           +PVGAV V  +++I+R  N      D +AHAE+ A+R   R L    +P  +LYVTLEPC
Sbjct: 49  VPVGAVIVRGDEVIARGFNHPIGGHDPSAHAEMAALRAAARALRNYRMPGCELYVTLEPC 108

Query: 84  TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQD 143
            MC+ AI  ARI R+ +GA +PK G   +    +  A  +H   +  G+        ++ 
Sbjct: 109 LMCSGAIMHARIARVVFGAPDPKTGACGSVVDAFADARLNHHTTVEGGVLADECGAALKS 168

Query: 144 FFKERR 149
           FF ERR
Sbjct: 169 FFAERR 174


>gi|83719984|ref|YP_442586.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia
           thailandensis E264]
 gi|83653809|gb|ABC37872.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia
           thailandensis E264]
          Length = 194

 Score = 79.3 bits (194), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 48/126 (38%), Positives = 69/126 (54%)

Query: 24  IPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83
           +PVGAV V  +++I+R  N      D +AHAE+ A+R   R L    +P  +LYVTLEPC
Sbjct: 49  VPVGAVIVRGDEVIARGFNHPIGGHDPSAHAEMAALRAAARALRNYRMPGCELYVTLEPC 108

Query: 84  TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQD 143
            MC+ AI  ARI R+ +GA +PK G   +    +  A  +H   +  G+        ++ 
Sbjct: 109 LMCSGAIMHARIARVVFGAPDPKTGACGSVVDAFADARLNHHTTVEGGVLADECGAALKS 168

Query: 144 FFKERR 149
           FF ERR
Sbjct: 169 FFAERR 174


>gi|194900476|ref|XP_001979783.1| GG22115 [Drosophila erecta]
 gi|190651486|gb|EDV48741.1| GG22115 [Drosophila erecta]
          Length = 160

 Score = 79.3 bits (194), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 48/146 (32%), Positives = 76/146 (52%), Gaps = 9/146 (6%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEIL---AIRMGC 63
           FM  AL EA+ A    E+PVG V V   K+++R GN     ++ T HAE +   AI   C
Sbjct: 4   FMEEALVEARRARDAGEVPVGCVFVHGGKVVARGGNEVNVHRNATRHAEFICIDAILASC 63

Query: 64  R---ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
           R   + ++++  E+ + VT+EPC MC+AA+    ++ + YG  N + GG    T     A
Sbjct: 64  RERRLPARQLFSEITVVVTVEPCIMCSAALHTLGVKEIIYGCENDRFGG---KTVVDVAA 120

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFK 146
                 EI  G+    +  +++DF+K
Sbjct: 121 VVGQRIEITGGVRADEAMALLKDFYK 146


>gi|289704736|ref|ZP_06501159.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Micrococcus luteus SK58]
 gi|289558546|gb|EFD51814.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Micrococcus luteus SK58]
          Length = 168

 Score = 79.3 bits (194), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 44/134 (32%), Positives = 71/134 (52%), Gaps = 7/134 (5%)

Query: 23  EIPVGAVAVLNN-KIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEI------LPEVD 75
           ++P+GA  V  +  +++  GN   +  D TAHAE+LA+R G  + +         L +  
Sbjct: 34  DVPIGAALVAGDGTVLAVVGNEREQHHDPTAHAEVLALRRGAELRAAAGAGDGWRLTDCT 93

Query: 76  LYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQ 135
           L VTLEPC MCA A+ LARI R+ +GA +PK G   +          +H  ++  G+  +
Sbjct: 94  LVVTLEPCPMCAGALLLARIPRVVFGAWDPKAGACGSVLDVVRDPRFNHQVQVRAGVRSE 153

Query: 136 RSRQIIQDFFKERR 149
            S  +++ FF  +R
Sbjct: 154 ESAALLRGFFAAQR 167


>gi|262183239|ref|ZP_06042660.1| hypothetical protein CaurA7_04544 [Corynebacterium aurimucosum ATCC
           700975]
          Length = 147

 Score = 79.3 bits (194), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 50/141 (35%), Positives = 72/141 (51%), Gaps = 3/141 (2%)

Query: 11  ALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQE 69
           ALE A+   +  +IPVGAV    +   ++   NR  +L D TAHAE+ AIR   R+    
Sbjct: 4   ALEVARTTPV-GDIPVGAVLYDASGNELATGVNRREQLNDPTAHAEVEAIRQAVRVHGDG 62

Query: 70  I-LPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEI 128
             L   +L VTLEPC MCA AI  +R+  + +GA  PK G   +  +        H PE+
Sbjct: 63  WRLEGCELVVTLEPCAMCAGAIQASRVSSVVFGAFEPKTGACGSLVEVLRAPGALHVPEV 122

Query: 129 YPGISEQRSRQIIQDFFKERR 149
             G+ E+   +++  FF   R
Sbjct: 123 RSGVLEEECAELLTGFFGGLR 143


>gi|94676768|ref|YP_588482.1| cytidine/deoxycytidylate deaminase family protein [Baumannia
           cicadellinicola str. Hc (Homalodisca coagulata)]
 gi|94219918|gb|ABF14077.1| cytidine/deoxycytidylate deaminase family protein [Baumannia
           cicadellinicola str. Hc (Homalodisca coagulata)]
          Length = 158

 Score = 79.3 bits (194), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 45/129 (34%), Positives = 65/129 (50%)

Query: 21  RNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80
           + E+PVGA+ VL  K I    N +    D TAHAEILA+R G + +    +    +YVTL
Sbjct: 14  KGEVPVGAILVLEGKKIGEGLNSSIHYHDPTAHAEILALRQGGKTIGNYRITGAVMYVTL 73

Query: 81  EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140
           EPC MC  A+  ARI R+ +GA   K   +       +    +H+  + P I  +     
Sbjct: 74  EPCLMCIGAMIHARISRIAFGAKAVKNNEMSLCLSVLSSTQINHNITLCPNILAEACSLQ 133

Query: 141 IQDFFKERR 149
           +  FFK +R
Sbjct: 134 LSTFFKRKR 142


>gi|323697968|ref|ZP_08109880.1| CMP/dCMP deaminase, zinc-binding [Desulfovibrio sp. ND132]
 gi|323457900|gb|EGB13765.1| CMP/dCMP deaminase, zinc-binding [Desulfovibrio desulfuricans
           ND132]
          Length = 144

 Score = 79.3 bits (194), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 49/143 (34%), Positives = 68/143 (47%), Gaps = 1/143 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  A  EA  AA   E PVGA        +++ A NR     D T HAEIL +R   R+L
Sbjct: 1   MDVAFGEACKAAQAGEAPVGAALFTPTGTLLASAHNRPIAAHDPTGHAEILCLREAARVL 60

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               LP+  L VTLEPC MC  A+  AR+  + + A + + G + +  Q   L   +H  
Sbjct: 61  RNYRLPDTILAVTLEPCLMCTGALIHARVAGVVFAARDERAGALVSNMQGCALPFTNHRL 120

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
               G+       +++ FF ERR
Sbjct: 121 WTVEGVMGNECSALLKRFFLERR 143


>gi|156186022|gb|ABU55329.1| cytidine and deoxycytidylate deaminase family protein
           [Callosobruchus chinensis]
          Length = 71

 Score = 79.3 bits (194), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 38/72 (52%), Positives = 49/72 (68%), Gaps = 3/72 (4%)

Query: 34  NKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLA 93
           + ++S A N +    D TAHAE+LAI+  C +LS   L + D+YVTLEPC MCA AIS A
Sbjct: 3   SNVVSSAHNISN---DPTAHAEMLAIKQECELLSTSTLYDSDIYVTLEPCPMCAQAISFA 59

Query: 94  RIRRLYYGASNP 105
            I+R Y+GA NP
Sbjct: 60  GIKRFYFGAYNP 71


>gi|291515557|emb|CBK64767.1| Cytosine/adenosine deaminases [Alistipes shahii WAL 8301]
          Length = 148

 Score = 79.0 bits (193), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 53/139 (38%), Positives = 74/139 (53%), Gaps = 5/139 (3%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  AL EAQ A  + E+P+GAV V    +I R  N    L D TAHAE+ A+      L
Sbjct: 10  FMRLALNEAQKALKQQEVPIGAVVVAGGAVIGRGHNLVETLADPTAHAEMQALTAAAATL 69

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
             + L E  LYVT+EPC MCA AI  A++ R+ +GA +PK      G + Y+ A  H   
Sbjct: 70  GGKYLQECTLYVTVEPCIMCAGAIGWAQVSRVVWGADDPK-----KGFRRYSEAVFHPRT 124

Query: 127 EIYPGISEQRSRQIIQDFF 145
            +  G+  +   +++  FF
Sbjct: 125 TVARGVLREECEELMSGFF 143


>gi|145511355|ref|XP_001441605.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124408855|emb|CAK74208.1| unnamed protein product [Paramecium tetraurelia]
          Length = 158

 Score = 79.0 bits (193), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 52/143 (36%), Positives = 76/143 (53%), Gaps = 14/143 (9%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNN--KIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           +M  ALE+A+      E+PVG V V  N  KI+ +A N   + K+ T H EI+ I    R
Sbjct: 11  YMKMALEQAELGRQNKEVPVGCVIVNRNDGKIVEKAYNNTNKSKNATQHCEIICINRMNR 70

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
            L   IL     +VT EPC MC  A++  +I  +YYG +N + GG  NG    T+ + + 
Sbjct: 71  DLEDCIL-----FVTCEPCIMCGQALNYVKIHSVYYGCNNSRFGG--NG----TVLSLNK 119

Query: 125 SPEIYPGISEQRSRQIIQDFFKE 147
            P  + G  E    +I+QDF++E
Sbjct: 120 YPS-FGGHLEYDCMKILQDFYEE 141


>gi|326772679|ref|ZP_08231963.1| cytidine and deoxycytidylate deaminase family protein [Actinomyces
           viscosus C505]
 gi|326637311|gb|EGE38213.1| cytidine and deoxycytidylate deaminase family protein [Actinomyces
           viscosus C505]
          Length = 196

 Score = 79.0 bits (193), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 57/141 (40%), Positives = 76/141 (53%), Gaps = 3/141 (2%)

Query: 11  ALEEAQNAALRNEIPVGAVAVLNNK--IISRAGNRNRELKDVTAHAEILAIRMGCRILSQ 68
           ALE A+ A    E+PVGAV VL+ +  +++ A N      D TAHAEI A+R     L  
Sbjct: 57  ALELARAAGEAGEVPVGAV-VLSPEGVVLAEAANAREAEHDPTAHAEIRALRAAGAALGD 115

Query: 69  EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEI 128
             L    L VTLEPCTMCA AI LAR+ RL  GA  P+ G   +          +H  E+
Sbjct: 116 SHLDGCTLVVTLEPCTMCAGAIVLARVARLVLGAWEPRTGACGSVRDVVRDTRANHQVEV 175

Query: 129 YPGISEQRSRQIIQDFFKERR 149
             G+  Q S++++  FF +RR
Sbjct: 176 RAGLRAQESQELLTAFFADRR 196


>gi|329948029|ref|ZP_08294930.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Actinomyces sp. oral taxon 170 str. F0386]
 gi|328523168|gb|EGF50269.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Actinomyces sp. oral taxon 170 str. F0386]
          Length = 143

 Score = 79.0 bits (193), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 50/129 (38%), Positives = 66/129 (51%), Gaps = 1/129 (0%)

Query: 22  NEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80
            E+PVGAV +     +++ A N      D TAHAEI A+R     L    L    L VTL
Sbjct: 15  GEVPVGAVVLSPEGTVLAEAANAREAQHDPTAHAEIRALRAAGAALGDSHLDGCTLVVTL 74

Query: 81  EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140
           EPCTMCA AI LAR+ RL  GA  P+ G   +       A  +H  E+  G+  + S+ +
Sbjct: 75  EPCTMCAGAIVLARVARLVLGAWEPRTGACGSVRDVVRDARANHQVEVRAGLRARESQDL 134

Query: 141 IQDFFKERR 149
           +  FF  RR
Sbjct: 135 LTAFFSGRR 143


>gi|326385119|ref|ZP_08206788.1| cytidine/deoxycytidylate deaminase family protein [Gordonia
           neofelifaecis NRRL B-59395]
 gi|326196152|gb|EGD53357.1| cytidine/deoxycytidylate deaminase family protein [Gordonia
           neofelifaecis NRRL B-59395]
          Length = 154

 Score = 79.0 bits (193), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 49/128 (38%), Positives = 68/128 (53%), Gaps = 2/128 (1%)

Query: 24  IPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEI-LPEVDLYVTLE 81
           +P+GAV    + + ++RA NR     D TAHAEILA+R           L +  L VT+E
Sbjct: 24  VPIGAVVFGPDGRELARAANRREADADPTAHAEILALRAAAARHGDGWRLSDCTLAVTVE 83

Query: 82  PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141
           PCTMCA AI LARI R+ +GA  PK G + +           + PE+  G+ E     ++
Sbjct: 84  PCTMCAGAIGLARISRVVFGAWEPKTGAVGSLWDVLRDPRQMYRPEVLAGVREDECAALV 143

Query: 142 QDFFKERR 149
           +DFF   R
Sbjct: 144 RDFFAAHR 151


>gi|152964439|ref|YP_001360223.1| CMP/dCMP deaminase zinc-binding [Kineococcus radiotolerans
           SRS30216]
 gi|151358956|gb|ABS01959.1| CMP/dCMP deaminase zinc-binding [Kineococcus radiotolerans
           SRS30216]
          Length = 144

 Score = 79.0 bits (193), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 54/143 (37%), Positives = 71/143 (49%), Gaps = 1/143 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELK-DVTAHAEILAIRMGCRIL 66
           M  AL+EA+      ++PVGAV V     +  AG   RE   D TAHAE+LA+R   R  
Sbjct: 1   MGLALDEARACLATGDVPVGAVVVDAAGTVLGAGRNEREAAGDPTAHAEVLALRAAARAR 60

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
            +  L    L VTLEPC MCA A  LAR+ RL  GA +P+ G   +       A  +H  
Sbjct: 61  GEWRLTGCTLVVTLEPCVMCAGATVLARVDRLVLGAWDPRFGAAGSLRDVVRDARLNHVV 120

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+   +     R ++  FF  RR
Sbjct: 121 EVAGDVRGAECRALLDGFFAARR 143


>gi|283851075|ref|ZP_06368359.1| CMP/dCMP deaminase zinc-binding [Desulfovibrio sp. FW1012B]
 gi|283573471|gb|EFC21447.1| CMP/dCMP deaminase zinc-binding [Desulfovibrio sp. FW1012B]
          Length = 181

 Score = 79.0 bits (193), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 45/126 (35%), Positives = 68/126 (53%), Gaps = 1/126 (0%)

Query: 25  PVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83
           PVGAV +    +++++ GN      D TAHAEILA+R     +    LP   L VTLEPC
Sbjct: 47  PVGAVLLSGAGEVLAQTGNGPISRADPTAHAEILALRQAAARVGNYRLPGSILVVTLEPC 106

Query: 84  TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQD 143
            MC  A+  AR+  L YGA +P+ G +++      L   +H  ++  G+    S  +++ 
Sbjct: 107 LMCLGAMIHARVGLLVYGAPDPRTGAVDSRLPGPDLPFFNHRFDVLSGVCADASAALLRQ 166

Query: 144 FFKERR 149
           FF+ RR
Sbjct: 167 FFRNRR 172


>gi|255626047|gb|ACU13368.1| unknown [Glycine max]
          Length = 170

 Score = 79.0 bits (193), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 44/99 (44%), Positives = 60/99 (60%), Gaps = 1/99 (1%)

Query: 5   NVFMSCALEEAQNAALRNE-IPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
           N F++ A+EEA  A       P GAV V N++I+S   N      D TAHAEI AIR  C
Sbjct: 16  NKFLTMAIEEAYKAVESGHGRPFGAVIVRNDEILSSCHNMVVRNADPTAHAEITAIREAC 75

Query: 64  RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGA 102
           R L+Q  L + ++Y + EPC MC +AI  ++I++L YGA
Sbjct: 76  RKLNQVELADSEIYASCEPCPMCLSAIHFSKIKKLVYGA 114


>gi|239916882|ref|YP_002956440.1| tRNA-adenosine deaminase [Micrococcus luteus NCTC 2665]
 gi|281414664|ref|ZP_06246406.1| tRNA-adenosine deaminase [Micrococcus luteus NCTC 2665]
 gi|239838089|gb|ACS29886.1| tRNA-adenosine deaminase [Micrococcus luteus NCTC 2665]
          Length = 168

 Score = 79.0 bits (193), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 44/134 (32%), Positives = 71/134 (52%), Gaps = 7/134 (5%)

Query: 23  EIPVGAVAVLNN-KIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEI------LPEVD 75
           ++P+GA  V  +  +++  GN   +  D TAHAE+LA+R G  + +         L +  
Sbjct: 34  DVPIGAALVAGDGTVLAVVGNEREQHHDPTAHAEVLALRRGAELRAAAGAHDGWRLTDCT 93

Query: 76  LYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQ 135
           L VTLEPC MCA A+ LARI R+ +GA +PK G   +          +H  ++  G+  +
Sbjct: 94  LVVTLEPCPMCAGALLLARIPRVVFGAWDPKAGACGSVLDVVRDPRFNHRVQVRAGVRSE 153

Query: 136 RSRQIIQDFFKERR 149
            S  +++ FF  +R
Sbjct: 154 ESAALLRGFFAAQR 167


>gi|255580984|ref|XP_002531310.1| tRNA-specific adenosine deaminase subunit TAD2, putative [Ricinus
           communis]
 gi|223529101|gb|EEF31082.1| tRNA-specific adenosine deaminase subunit TAD2, putative [Ricinus
           communis]
          Length = 223

 Score = 79.0 bits (193), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 47/115 (40%), Positives = 65/115 (56%), Gaps = 15/115 (13%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  ALE+A++A    E+PVG V V + K+I+   NR  E ++ T HAE+ AI +   +L
Sbjct: 46  YMELALEQARHALDSLEVPVGCVIVEDGKVIASGRNRTTETRNATRHAEMEAIDV---LL 102

Query: 67  SQ------------EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109
            Q            E   +  LYVT EPC MCAAA+S+  I  +YYG +N K GG
Sbjct: 103 EQWQKGGLSVSEVAEKFSKCVLYVTCEPCIMCAAALSILGIEEVYYGCANDKFGG 157


>gi|254233244|ref|ZP_04926570.1| hypothetical protein TBCG_03677 [Mycobacterium tuberculosis C]
 gi|124603037|gb|EAY61312.1| hypothetical protein TBCG_03677 [Mycobacterium tuberculosis C]
          Length = 152

 Score = 79.0 bits (193), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 43/114 (37%), Positives = 62/114 (54%), Gaps = 1/114 (0%)

Query: 37  ISRAGNRNRELKDVTAHAEILAIRMGCRILSQEI-LPEVDLYVTLEPCTMCAAAISLARI 95
           ++RA N    L D TAHAEILA+R+   +L     L    L VT+EPCTMCA A+ +AR+
Sbjct: 37  LARAVNAREALGDPTAHAEILAMRLAAGVLGDGWRLEGTTLAVTVEPCTMCAGALVMARV 96

Query: 96  RRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
            RL +GA  PK G + +          +H PE+  G+  +     ++ FF  +R
Sbjct: 97  ARLVFGAWEPKTGAVGSLWDVVRDRRLNHRPEVRGGVLARECAAPLEAFFARQR 150


>gi|115456425|ref|NP_001051813.1| Os03g0833900 [Oryza sativa Japonica Group]
 gi|40714681|gb|AAR88587.1| putative deoxycytidine deaminase [Oryza sativa Japonica Group]
 gi|108711941|gb|ABF99736.1| Guanine deaminase, putative, expressed [Oryza sativa Japonica
           Group]
 gi|113550284|dbj|BAF13727.1| Os03g0833900 [Oryza sativa Japonica Group]
 gi|215707116|dbj|BAG93576.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|218194042|gb|EEC76469.1| hypothetical protein OsI_14201 [Oryza sativa Indica Group]
 gi|222626116|gb|EEE60248.1| hypothetical protein OsJ_13255 [Oryza sativa Japonica Group]
          Length = 186

 Score = 79.0 bits (193), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 42/97 (43%), Positives = 59/97 (60%), Gaps = 1/97 (1%)

Query: 7   FMSCALEEA-QNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           F+S A+EEA Q     +  P GAV V N++I+    N   +  D TAHAE+ AIR  C+ 
Sbjct: 34  FLSKAVEEAYQGVDCGHGGPFGAVVVRNDEIVVSCHNMVLDYTDPTAHAEVTAIREACKK 93

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGA 102
           L +  L + ++Y + EPC MC  A+ L+RI+RL YGA
Sbjct: 94  LGKIELSDCEMYASCEPCPMCFGAVHLSRIKRLVYGA 130


>gi|297833236|ref|XP_002884500.1| deoxycytidine deaminase [Arabidopsis lyrata subsp. lyrata]
 gi|297330340|gb|EFH60759.1| deoxycytidine deaminase [Arabidopsis lyrata subsp. lyrata]
          Length = 191

 Score = 78.6 bits (192), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 39/78 (50%), Positives = 51/78 (65%)

Query: 25  PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84
           P GAV V  N+I+    N   + KD TAHAEI+AIR  C+ L++  L E +LY + EPC 
Sbjct: 62  PFGAVIVHKNEIVVSCHNMVLKYKDPTAHAEIIAIREACKKLNEIKLSECELYASCEPCP 121

Query: 85  MCAAAISLARIRRLYYGA 102
           MC  AI L+R++RL YGA
Sbjct: 122 MCFGAIHLSRLKRLVYGA 139


>gi|15241124|ref|NP_198157.1| cytidine/deoxycytidylate deaminase family protein [Arabidopsis
           thaliana]
 gi|14532498|gb|AAK63977.1| AT5g28050/F15F15_120 [Arabidopsis thaliana]
 gi|22137296|gb|AAM91493.1| AT5g28050/F15F15_120 [Arabidopsis thaliana]
 gi|332006385|gb|AED93768.1| cytidine/deoxycytidylate deaminase-like protein [Arabidopsis
           thaliana]
          Length = 185

 Score = 78.6 bits (192), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 41/97 (42%), Positives = 61/97 (62%), Gaps = 1/97 (1%)

Query: 7   FMSCALEEA-QNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           F++ A+EEA +     +  P GAV V NN++++   N   +  D TAHAE+ AIR  C+ 
Sbjct: 33  FLTQAVEEAYKGVDCGDGGPFGAVIVHNNEVVASCHNMVLKYTDPTAHAEVTAIREACKK 92

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGA 102
           L++  L E ++Y + EPC MC  AI L+R++RL YGA
Sbjct: 93  LNKIELSECEIYASCEPCPMCFGAIHLSRLKRLVYGA 129


>gi|317485386|ref|ZP_07944265.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Bilophila wadsworthia 3_1_6]
 gi|316923345|gb|EFV44552.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Bilophila wadsworthia 3_1_6]
          Length = 189

 Score = 78.6 bits (192), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 50/144 (34%), Positives = 76/144 (52%), Gaps = 1/144 (0%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
            M  A+ +A+ A  + E+PVGA+ V     I++   N+   L D +AHAEI+A+R    +
Sbjct: 46  LMLQAIAKARQAPQQGEVPVGALIVDPAGTILAAEHNQPITLSDPSAHAEIMAMRSAGAV 105

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           L    L    L VTLEPC MC  AI  AR+  + YGA++ K G +E+      L   +H 
Sbjct: 106 LGNYRLEGCILVVTLEPCLMCTGAIVHARLAGVVYGAADNKAGAVESCFNGLDLPFHNHR 165

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
                GI+      ++Q+FF++ R
Sbjct: 166 VWHMGGIAAPECASLLQNFFQKSR 189


>gi|79328917|ref|NP_001031959.1| cytidine/deoxycytidylate deaminase family protein [Arabidopsis
           thaliana]
 gi|332006386|gb|AED93769.1| cytidine/deoxycytidylate deaminase-like protein [Arabidopsis
           thaliana]
          Length = 204

 Score = 78.6 bits (192), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 41/97 (42%), Positives = 61/97 (62%), Gaps = 1/97 (1%)

Query: 7   FMSCALEEA-QNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           F++ A+EEA +     +  P GAV V NN++++   N   +  D TAHAE+ AIR  C+ 
Sbjct: 52  FLTQAVEEAYKGVDCGDGGPFGAVIVHNNEVVASCHNMVLKYTDPTAHAEVTAIREACKK 111

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGA 102
           L++  L E ++Y + EPC MC  AI L+R++RL YGA
Sbjct: 112 LNKIELSECEIYASCEPCPMCFGAIHLSRLKRLVYGA 148


>gi|302535698|ref|ZP_07288040.1| cytidine/deoxycytidine deaminase [Streptomyces sp. C]
 gi|302444593|gb|EFL16409.1| cytidine/deoxycytidine deaminase [Streptomyces sp. C]
          Length = 163

 Score = 78.6 bits (192), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 52/140 (37%), Positives = 73/140 (52%), Gaps = 1/140 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  ALEEA  A    ++PVGAV +    +++S   N      D TAHAE+LA+R     L
Sbjct: 22  MRLALEEAALAVPAGDVPVGAVVLGPGGELLSTGHNEREAAGDPTAHAELLALRRAAARL 81

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
            +  L    L VTLEPC MCA A+  +R+ R+ YGA + K G   +          +H P
Sbjct: 82  GEWRLTGCTLVVTLEPCVMCAGALVQSRVARVVYGAGDEKAGAAGSLWDLVRDRRLNHRP 141

Query: 127 EIYPGISEQRSRQIIQDFFK 146
           E+  G+ EQ   + + DFF+
Sbjct: 142 EVIRGVLEQECARQLTDFFR 161


>gi|170585310|ref|XP_001897427.1| tRNA-specific adenosine deaminase 2 [Brugia malayi]
 gi|158595106|gb|EDP33679.1| tRNA-specific adenosine deaminase 2, putative [Brugia malayi]
          Length = 192

 Score = 78.6 bits (192), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 47/149 (31%), Positives = 87/149 (58%), Gaps = 9/149 (6%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           F++ A E A +A   NE+PVG V V   + ++   N     K+ T HAE++A+ M  +  
Sbjct: 14  FLNRAFEIAVDAVANNEVPVGCVFVFEGQEVAFGRNDVNRSKNPTYHAEMVALEMMKQWC 73

Query: 67  S------QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN-GTQFYTL 119
           +      ++++    LYVTLEPC MCA+A+    ++++ YGA+N + GG+ + GT+    
Sbjct: 74  TDNGRELEDVMRCTTLYVTLEPCIMCASALYHLHLKKILYGAANERFGGLLSVGTREKYG 133

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKER 148
           A   H  EI P ++  R+ +++++F++++
Sbjct: 134 AK--HFIEIMPNLNVSRAVKLLKEFYEKQ 160


>gi|228994217|ref|ZP_04154115.1| Cytosine deaminase [Bacillus pseudomycoides DSM 12442]
 gi|228765510|gb|EEM14166.1| Cytosine deaminase [Bacillus pseudomycoides DSM 12442]
          Length = 169

 Score = 78.6 bits (192), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 45/107 (42%), Positives = 62/107 (57%), Gaps = 3/107 (2%)

Query: 6   VFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           +F+  ALEEA+ A   N  PVGA+ V  NN+I+ +  NR     D +AHAEI AIR   +
Sbjct: 7   LFLEMALEEAKKAMKENTYPVGAIIVGRNNEILGKGRNRVHTQDDASAHAEIDAIRTAGK 66

Query: 65  --ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109
             IL++E    + LY TLEPC MC  AI  +   R+ +  ++ KG G
Sbjct: 67  KLILAKENRLPITLYTTLEPCPMCTGAILFSHFTRVVWILNDDKGFG 113


>gi|311085993|gb|ADP66075.1| hypothetical protein CWO_01335 [Buchnera aphidicola str. LL01
           (Acyrthosiphon pisum)]
          Length = 130

 Score = 78.6 bits (192), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 42/101 (41%), Positives = 58/101 (57%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
           K   +M  AL+ A  A  + EIP+GA+ V   +II    N +    D TAHAEI+A+R  
Sbjct: 5   KDKNWMKIALKYAYYAKEKGEIPIGAILVFKERIIGIGWNSSISKNDPTAHAEIIALRGA 64

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
            + +    L    LYVTL+PC MC  AI  +RI+RL +GA+
Sbjct: 65  GKKIKNYRLLNTTLYVTLQPCIMCCGAIIQSRIKRLVFGAN 105


>gi|169642534|gb|AAI60619.1| Adat2 protein [Danio rerio]
          Length = 238

 Score = 78.6 bits (192), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 51/159 (32%), Positives = 79/159 (49%), Gaps = 28/159 (17%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM---GC 63
           +M+ A + A  A    E+PVG + V NN+II +  N   E K+ T HAE++A+      C
Sbjct: 24  WMAKAFDMAVEAFENGEVPVGCLMVYNNEIIGKGRNEVNETKNATRHAEMVALDQVLDWC 83

Query: 64  RIL---SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI---------- 110
           R+     +E+  +  LYVT+EPC MCAAA+ L RI  + YG  N + GG           
Sbjct: 84  RLREKDCKEVCEQTVLYVTVEPCIMCAAALRLLRIPFVVYGCKNERFGGCGSVLDVSSDH 143

Query: 111 --ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
               GT F  +A          G   + + ++++ F+K+
Sbjct: 144 LPHTGTSFKCIA----------GYRAEEAVEMLKTFYKQ 172


>gi|156186020|gb|ABU55328.1| cytidine and deoxycytidylate deaminase family protein
           [Callosobruchus chinensis]
          Length = 71

 Score = 78.6 bits (192), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 38/72 (52%), Positives = 49/72 (68%), Gaps = 3/72 (4%)

Query: 34  NKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLA 93
           + ++S A N +    D TAHAE+LAI+  C +LS   L + D+YVTLEPC MCA AIS A
Sbjct: 3   SNVVSSAHNISN---DPTAHAEMLAIKQECELLSTSTLYDSDIYVTLEPCPMCAQAISFA 59

Query: 94  RIRRLYYGASNP 105
            I+R Y+GA NP
Sbjct: 60  XIKRXYFGAYNP 71


>gi|239907227|ref|YP_002953968.1| putative deaminase [Desulfovibrio magneticus RS-1]
 gi|239797093|dbj|BAH76082.1| putative deaminase [Desulfovibrio magneticus RS-1]
          Length = 162

 Score = 78.6 bits (192), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 46/129 (35%), Positives = 70/129 (54%), Gaps = 1/129 (0%)

Query: 22  NEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80
            E PVGAV +    ++++RAGN      D TAHAE+  +R     +    LP   L VTL
Sbjct: 29  GETPVGAVLLSAAGELLARAGNAPITTNDPTAHAEMRVLRQAAAKVGNYRLPGTILAVTL 88

Query: 81  EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140
           EPC MC  A+  AR+  L YGA++P+ G +++      L   +H   +  GI  +    I
Sbjct: 89  EPCLMCLGAMIHARVGLLVYGATDPRCGVVDSRLPGPDLPFFNHRFNVVSGIRAEECGGI 148

Query: 141 IQDFFKERR 149
           +++FF+E+R
Sbjct: 149 LRNFFREKR 157


>gi|217071302|gb|ACJ84011.1| unknown [Medicago truncatula]
          Length = 181

 Score = 78.6 bits (192), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 42/97 (43%), Positives = 59/97 (60%), Gaps = 1/97 (1%)

Query: 7   FMSCALEEA-QNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           F+  A+EEA +     +  P GAV VLN+++I+   N      D +AHAE+ AIR  C+ 
Sbjct: 29  FLRKAVEEAYKGVECEDGGPFGAVIVLNDEVIASCHNMVLRNTDPSAHAEVTAIREACKK 88

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGA 102
           L Q  L E ++Y + EPC MC  AI L+R++RL YGA
Sbjct: 89  LKQIELSECEIYASCEPCPMCFGAIHLSRVKRLVYGA 125


>gi|213965664|ref|ZP_03393857.1| tRNA-specific adenosine deaminase [Corynebacterium amycolatum SK46]
 gi|213951615|gb|EEB63004.1| tRNA-specific adenosine deaminase [Corynebacterium amycolatum SK46]
          Length = 147

 Score = 78.6 bits (192), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 47/144 (32%), Positives = 73/144 (50%), Gaps = 3/144 (2%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  A+ EA + A   ++PVGAV V    K++ R  NR     D  AHAE++A+R   R +
Sbjct: 1   MRLAIAEAAHTA-PGDVPVGAVVVDAEGKVVGRGSNRREADGDPLAHAEVIALREATRAV 59

Query: 67  SQEI-LPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
                L +  L VTLEPC MCA A  + R+ R+ +GA +PK G   +            +
Sbjct: 60  GDGWRLEQCTLVVTLEPCVMCAGACVMGRVGRVVFGAWSPKTGACGSIADVIRDPAHAFT 119

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
           P++  G+        +++FF+ +R
Sbjct: 120 PQVRGGVLADECSVYLREFFERQR 143


>gi|74317234|ref|YP_314974.1| tRNA-adenosine deaminase [Thiobacillus denitrificans ATCC 25259]
 gi|74056729|gb|AAZ97169.1| probable cytosine/adenosine deaminases [Thiobacillus denitrificans
           ATCC 25259]
          Length = 151

 Score = 78.6 bits (192), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 47/126 (37%), Positives = 62/126 (49%)

Query: 24  IPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83
           +PVGA+ V   +I+ R  NR     D TAHAE++A+R     L    L    LYVT+EPC
Sbjct: 17  VPVGALVVCGGEIVGRGYNRPISSFDPTAHAEVMALRDAAARLGNYRLVGCTLYVTMEPC 76

Query: 84  TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQD 143
            MCA AI  ARI R+ YGA   K G   +    +     +   E+  G+        I  
Sbjct: 77  VMCAGAILHARIARVVYGAREYKTGAHGSIVDVFAEPRLNFHCEVEGGVLADECAATISG 136

Query: 144 FFKERR 149
           FF+ RR
Sbjct: 137 FFEARR 142


>gi|302794668|ref|XP_002979098.1| hypothetical protein SELMODRAFT_109716 [Selaginella moellendorffii]
 gi|300153416|gb|EFJ20055.1| hypothetical protein SELMODRAFT_109716 [Selaginella moellendorffii]
          Length = 162

 Score = 78.2 bits (191), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 52/149 (34%), Positives = 79/149 (53%), Gaps = 16/149 (10%)

Query: 14  EAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM---GCRILSQEI 70
           +A+ A  R E+PVG V V N ++I+   NR  E ++ T HAE+ AI M        S E 
Sbjct: 1   QARQALNRLEVPVGCVIVENGRVIASGSNRTNETRNATRHAEMEAIDMLLPRWECSSHED 60

Query: 71  LPE----VDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
             +     +LYVT EPC MCAAA+SL  I +++YG  N + GG  +    ++     HSP
Sbjct: 61  FSKRFAGCELYVTCEPCIMCAAALSLLGIGKVFYGCKNDRFGGCGSILSLHSNGV-GHSP 119

Query: 127 E-----IYP---GISEQRSRQIIQDFFKE 147
           E      YP   GI  + +  + ++F+++
Sbjct: 120 ESAGGMTYPCVGGIMAEEAIGLFREFYEQ 148


>gi|134024903|gb|AAI35110.1| Unknown (protein for IMAGE:7163502) [Danio rerio]
          Length = 241

 Score = 78.2 bits (191), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 44/109 (40%), Positives = 63/109 (57%), Gaps = 6/109 (5%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM---GC 63
           +M+ A + A  A    E+PVG + V NN+II +  N   E K+ T HAE++A+      C
Sbjct: 51  WMAKAFDMAVEALENGEVPVGCLMVYNNEIIGKGRNEVNETKNATRHAEMVALDQVLDWC 110

Query: 64  RILSQ---EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109
           R+  +   E+  +  LYVT+EPC MCAAA+ L RI  + YG  N + GG
Sbjct: 111 RLREKDCKEVCEQTVLYVTVEPCIMCAAALRLLRIPFVVYGCKNERFGG 159


>gi|229070516|ref|ZP_04203757.1| Cytosine deaminase [Bacillus cereus F65185]
 gi|228712598|gb|EEL64532.1| Cytosine deaminase [Bacillus cereus F65185]
          Length = 169

 Score = 78.2 bits (191), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 48/106 (45%), Positives = 62/106 (58%), Gaps = 3/106 (2%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIR-MGCR 64
           F+  ALEEA+ A   N  PVGAV V  NN +I+R  NR    KD+TAHAEI AIR  G  
Sbjct: 9   FLEMALEEAEKALKENTYPVGAVIVDGNNNVIARGRNRVHPQKDITAHAEIDAIRNAGEA 68

Query: 65  ILSQEILPE-VDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109
           +   +I  E   +Y TLEPC MC   I  A+I+R+ +  ++  G G
Sbjct: 69  MFDAKIKNEKFTIYSTLEPCPMCTGGILFAKIQRVVWLLNDDLGFG 114


>gi|302329844|gb|ADL20038.1| Cytosine/adenosine deaminase [Corynebacterium pseudotuberculosis
           1002]
          Length = 151

 Score = 78.2 bits (191), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 52/145 (35%), Positives = 72/145 (49%), Gaps = 3/145 (2%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
            M  A+ +AQ A    +IPVGAV    + +++ R  NR    +D   HAEI+AIR     
Sbjct: 8   LMRQAIIQAQ-ATPPGDIPVGAVIFGPDGEVLGRGVNRREADRDPLGHAEIMAIREAVAN 66

Query: 66  LSQEI-LPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
                 L +  L VTLEPCTMCA A+  ARI R+++GA  PK G   +           H
Sbjct: 67  HDDGWRLTDCTLAVTLEPCTMCAGALVGARIGRIFFGAYEPKTGACGSAFDVVRDPAVLH 126

Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149
            PE+  GI +     ++  FF+  R
Sbjct: 127 VPEVRGGILQDECAALVTHFFEGLR 151


>gi|302205290|gb|ADL09632.1| Cytosine/adenosine deaminase [Corynebacterium pseudotuberculosis
           C231]
          Length = 182

 Score = 78.2 bits (191), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 52/145 (35%), Positives = 72/145 (49%), Gaps = 3/145 (2%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
            M  A+ +AQ A    +IPVGAV    + +++ R  NR    +D   HAEI+AIR     
Sbjct: 39  LMRQAIIQAQ-ATPPGDIPVGAVIFGPDGEVLGRGVNRREADRDPLGHAEIMAIREAVAN 97

Query: 66  LSQEI-LPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
                 L +  L VTLEPCTMCA A+  ARI R+++GA  PK G   +           H
Sbjct: 98  HDDGWRLTDCTLAVTLEPCTMCAGALVGARIGRIFFGAYEPKTGACGSAFDVVRDPAVLH 157

Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149
            PE+  GI +     ++  FF+  R
Sbjct: 158 VPEVRGGILQDECAALVTHFFEGLR 182


>gi|303242511|ref|ZP_07328990.1| CMP/dCMP deaminase zinc-binding [Acetivibrio cellulolyticus CD2]
 gi|302589929|gb|EFL59698.1| CMP/dCMP deaminase zinc-binding [Acetivibrio cellulolyticus CD2]
          Length = 157

 Score = 78.2 bits (191), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 49/150 (32%), Positives = 77/150 (51%), Gaps = 2/150 (1%)

Query: 1   MKKGNVFMSCALEEA-QNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
           M+K + FM  A +EA +     +  P GAV V +N II+RA N   +  D T HAE++AI
Sbjct: 1   MRKNSDFMKVAAQEAVEGVKSGHGGPFGAVIVKDNMIIARAHNEVIKNNDPTDHAEMIAI 60

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
           R   ++L +  L + +LY + EPC MC +AI  A+I +++YG +      I    + Y  
Sbjct: 61  RSAAKMLERFDLSDCELYTSCEPCPMCFSAIHWAKIEKVFYGCTREDAASIGFDDK-YIY 119

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
                  E      EQ+ R++  + F E +
Sbjct: 120 DVIKGKAERKKVEFEQKDRELCLEAFDEWK 149


>gi|78212739|ref|YP_381518.1| tRNA-adenosine deaminase [Synechococcus sp. CC9605]
 gi|78197198|gb|ABB34963.1| cytidine/deoxycytidylate deaminase family protein [Synechococcus
           sp. CC9605]
          Length = 174

 Score = 78.2 bits (191), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 43/138 (31%), Positives = 71/138 (51%), Gaps = 3/138 (2%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNN--KIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           +M   L+ A+   L  E+PV AV +L+   + I    NR    +D   HAE++A++    
Sbjct: 27  WMDVLLQRAEGVGLEGEVPVAAV-ILDGQGRAIGHGRNRRENNRDPLGHAELVALQQAAI 85

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
           + +        L VTLEPC MCA A+  AR+  + + AS+PK GG+       T A+ HH
Sbjct: 86  VQNDWRFNNCTLIVTLEPCPMCAGALVQARMGTVVFAASDPKRGGLGGSLDLSTHASAHH 145

Query: 125 SPEIYPGISEQRSRQIIQ 142
             ++   + E  +R+ ++
Sbjct: 146 HMKVIQSVREPEAREQLE 163


>gi|313157371|gb|EFR56794.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Alistipes sp. HGB5]
          Length = 149

 Score = 78.2 bits (191), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 49/144 (34%), Positives = 72/144 (50%), Gaps = 5/144 (3%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           K    FM  AL EA+ A    E+P+GAV V +  ++ R  N    L D TAHAE+ A+  
Sbjct: 6   KTDEKFMRLALNEARKALQLQEVPIGAVVVADGAVVGRGHNLVETLSDPTAHAEMQALTA 65

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
               L  + L    LYVT+EPC MCA A   A++ R+ +GA +PK      G + Y+   
Sbjct: 66  AASTLGGKYLQGCTLYVTVEPCIMCAGATGWAQVGRVVWGADDPK-----KGYRRYSETV 120

Query: 122 CHHSPEIYPGISEQRSRQIIQDFF 145
            H    +  G+  +   +++  FF
Sbjct: 121 FHPKTTVVRGVLGEECEELMTSFF 144


>gi|157413307|ref|YP_001484173.1| putative cytidine/deoxycytidylate deaminase [Prochlorococcus
           marinus str. MIT 9215]
 gi|157387882|gb|ABV50587.1| putative cytidine/deoxycytidylate deaminase [Prochlorococcus
           marinus str. MIT 9215]
          Length = 171

 Score = 78.2 bits (191), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 47/141 (33%), Positives = 71/141 (50%), Gaps = 8/141 (5%)

Query: 17  NAALRNEIPVGAVA------VLN--NKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQ 68
           N+ LR  I +G V       +L+   + I R  NR    KD   HAEI+A+R    I + 
Sbjct: 28  NSLLRRSIEIGKVELPICSIILDERGRCIGRGVNRRNINKDPLGHAEIMALRQASLIKND 87

Query: 69  EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEI 128
               E  +   LEPCTMC++A+  AR+ ++ +GA + K GG+          + HH  EI
Sbjct: 88  WRFNECTIITNLEPCTMCSSALIQARMGKVIFGAYDKKRGGLGGSIDLSKHESAHHKMEI 147

Query: 129 YPGISEQRSRQIIQDFFKERR 149
             G+ E    +I+Q +FK+ R
Sbjct: 148 IGGLLEDECSKILQIWFKKLR 168


>gi|302559794|ref|ZP_07312136.1| cytidine and deoxycytidylate deaminase [Streptomyces griseoflavus
           Tu4000]
 gi|302477412|gb|EFL40505.1| cytidine and deoxycytidylate deaminase [Streptomyces griseoflavus
           Tu4000]
          Length = 107

 Score = 78.2 bits (191), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 39/100 (39%), Positives = 56/100 (56%)

Query: 49  DVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGG 108
           D TAHAE+LA+R     L +  L    L VTLEPCTMCA AI  +R+ R+ YGA + K G
Sbjct: 8   DPTAHAEVLALRRAAAELGEWRLAGCTLVVTLEPCTMCAGAIQQSRVDRVVYGARDEKAG 67

Query: 109 GIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKER 148
              +          +H PE+  G+  +   +++ +FF+ER
Sbjct: 68  AAGSLWDLVRDRRLNHRPEVIEGVLSEECARLLTEFFRER 107


>gi|299747155|ref|XP_002911134.1| tRNA specific adenosine deaminase [Coprinopsis cinerea
           okayama7#130]
 gi|298407392|gb|EFI27640.1| tRNA specific adenosine deaminase [Coprinopsis cinerea
           okayama7#130]
          Length = 188

 Score = 78.2 bits (191), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 44/112 (39%), Positives = 64/112 (57%), Gaps = 11/112 (9%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  A+  A+ A    E+PVG V V + KII++A NR  EL++ T HAE+ AI   C + 
Sbjct: 14  WMKEAMNMAEEALAAGEVPVGCVFVRDEKIIAKARNRTNELRNATRHAELEAI--DCILS 71

Query: 67  SQEILPE---------VDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109
             E+ P+           LYVT+EPC MCA+A+    I+ ++YG  N + GG
Sbjct: 72  DNELTPQKGEPYPLSTTTLYVTVEPCIMCASALRQLGIKEVFYGCGNERFGG 123


>gi|131888897|ref|NP_001076566.1| tRNA-specific adenosine deaminase 2 [Danio rerio]
 gi|55962646|emb|CAI11650.1| novel protein [Danio rerio]
 gi|190337669|gb|AAI63783.1| Adenosine deaminase, tRNA-specific 2, TAD2 homolog (S. cerevisiae)
           [Danio rerio]
 gi|190340014|gb|AAI63804.1| Adenosine deaminase, tRNA-specific 2, TAD2 homolog (S. cerevisiae)
           [Danio rerio]
          Length = 206

 Score = 78.2 bits (191), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 51/161 (31%), Positives = 79/161 (49%), Gaps = 28/161 (17%)

Query: 6   VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM---G 62
            +M+ A + A  A    E+PVG + V NN+II +  N   E K+ T HAE++A+      
Sbjct: 23  TWMAKAFDMAVEALENGEVPVGCLMVYNNEIIGKGRNEVNETKNATRHAEMVALDQVLDW 82

Query: 63  CRILSQ---EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI--------- 110
           CR+  +   E+  +  LYVT+EPC MCAAA+ L RI  + YG  N + GG          
Sbjct: 83  CRLREKDCKEVCEQTVLYVTVEPCIMCAAALRLLRIPFVVYGCKNERFGGCGSVLDVSSD 142

Query: 111 ---ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKER 148
                GT F  +A          G   + + ++++ F+K+ 
Sbjct: 143 HLPHTGTSFKCIA----------GYRAEEAVEMLKTFYKQE 173


>gi|308176278|ref|YP_003915684.1| cytosine deaminase [Arthrobacter arilaitensis Re117]
 gi|307743741|emb|CBT74713.1| putative cytosine deaminase [Arthrobacter arilaitensis Re117]
          Length = 158

 Score = 78.2 bits (191), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 45/135 (33%), Positives = 72/135 (53%), Gaps = 7/135 (5%)

Query: 22  NEIPVGAVAVLNNKIISRAGNRNREL-KDVTAHAEILAIRMGCRILSQE------ILPEV 74
           +++P+GAV +     +   G   RE   D TAHAE++AIR   + L  +       L + 
Sbjct: 23  DDVPIGAVILSPAGEVLATGRNEREAGNDPTAHAEVVAIRNAVKALEAKGEDDGWRLSDC 82

Query: 75  DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISE 134
            L VTLEPC MCA AI L+RI +L +GA + K G   +          +H  E+Y  + E
Sbjct: 83  TLVVTLEPCAMCAGAIVLSRIPKLVFGAWDEKAGACGSVFDIVREPRLNHWVEVYSRVKE 142

Query: 135 QRSRQIIQDFFKERR 149
           +   +++++FF+ +R
Sbjct: 143 EECAELLREFFRGKR 157


>gi|255324366|ref|ZP_05365485.1| tRNA-specific adenosine deaminase [Corynebacterium
           tuberculostearicum SK141]
 gi|255298585|gb|EET77883.1| tRNA-specific adenosine deaminase [Corynebacterium
           tuberculostearicum SK141]
          Length = 143

 Score = 78.2 bits (191), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 45/130 (34%), Positives = 67/130 (51%), Gaps = 2/130 (1%)

Query: 22  NEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEI-LPEVDLYVT 79
            ++PVGAV        ++   NR  EL D TAHAE+ AIR   R+      L   +L VT
Sbjct: 14  GDVPVGAVLYDAAGTELATGVNRREELADPTAHAEVEAIRQAVRVHGDGWRLSGCELVVT 73

Query: 80  LEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139
           LEPC MCA A+  AR+  + +GA  PK G   +        T   +P++  G+ E+    
Sbjct: 74  LEPCAMCAGALQAARVGSVVFGAFEPKTGACGSLIDVLRAPTAPFTPQVRGGVLEEECAA 133

Query: 140 IIQDFFKERR 149
           ++++FF + R
Sbjct: 134 LLRNFFDDLR 143


>gi|300780042|ref|ZP_07089898.1| cytidine and deoxycytidylate deaminase [Corynebacterium genitalium
           ATCC 33030]
 gi|300534152|gb|EFK55211.1| cytidine and deoxycytidylate deaminase [Corynebacterium genitalium
           ATCC 33030]
          Length = 151

 Score = 78.2 bits (191), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 48/139 (34%), Positives = 72/139 (51%), Gaps = 2/139 (1%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  A+E A+   +  +IPVGAV    + + I+   NR    +D   HAE++  R   + L
Sbjct: 1   MRRAIEVARTTPI-GDIPVGAVLYGPDGEEIATGTNRRETDRDPVGHAEVVVTRKAAQAL 59

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L   +L VTLEPCTMCA AI  AR++ L +GA  PK G + +           H+ 
Sbjct: 60  GTWRLDGCELVVTLEPCTMCAGAILGARVQSLVFGAYEPKTGAVGSLIDVLRDPPHLHTV 119

Query: 127 EIYPGISEQRSRQIIQDFF 145
           E+  G+ E  +  +++DFF
Sbjct: 120 EVRGGVLETETASLMRDFF 138


>gi|41406377|ref|NP_959213.1| hypothetical protein MAP0279 [Mycobacterium avium subsp.
           paratuberculosis K-10]
 gi|41394725|gb|AAS02596.1| hypothetical protein MAP_0279 [Mycobacterium avium subsp.
           paratuberculosis K-10]
          Length = 152

 Score = 78.2 bits (191), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 56/145 (38%), Positives = 76/145 (52%), Gaps = 3/145 (2%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
            +  AL  A  A  R+ +P+GAV V  +   ++RA N    L D TAHAEILA+R     
Sbjct: 7   LIRSALAVAATAGPRD-VPIGAVVVGADGTELARAVNAREALGDPTAHAEILALRAAAAA 65

Query: 66  LSQEI-LPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
           L     L    L VT+EPCTMCA A+ LARI RL +GA  PK G + +          +H
Sbjct: 66  LGDGWRLEGATLAVTVEPCTMCAGALVLARIARLVFGAWEPKTGAVGSLWDVVRDRRLNH 125

Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149
            PE+  G+ E+     ++ FF  +R
Sbjct: 126 RPEVRGGVLERECAAPLEGFFARQR 150


>gi|269793794|ref|YP_003313249.1| tRNA-adenosine deaminase [Sanguibacter keddieii DSM 10542]
 gi|269095979|gb|ACZ20415.1| tRNA-adenosine deaminase [Sanguibacter keddieii DSM 10542]
          Length = 147

 Score = 77.8 bits (190), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 42/117 (35%), Positives = 56/117 (47%)

Query: 33  NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISL 92
           +  +I R  N      D TAHAE+LA+R   + L +  L    L VTLEPC MCA A  L
Sbjct: 27  DGTVIGRGHNAREAAGDPTAHAEVLALREAAQTLGEWRLTGCTLVVTLEPCVMCAGATML 86

Query: 93  ARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
           AR+ RL  GA + K G   +           H  E+  G+ E     ++ DFF + R
Sbjct: 87  ARVPRLVLGAWDDKAGATGSMWDLVRDRRSTHRVEVVGGVREAECAALLLDFFADHR 143


>gi|161784292|sp|Q5RIV4|ADAT2_DANRE RecName: Full=tRNA-specific adenosine deaminase 2; AltName:
           Full=Deaminase domain-containing protein 1; AltName:
           Full=tRNA-specific adenosine-34 deaminase subunit ADAT2
          Length = 214

 Score = 77.8 bits (190), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 44/109 (40%), Positives = 63/109 (57%), Gaps = 6/109 (5%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM---GC 63
           +M+ A + A  A    E+PVG + V NN+II +  N   E K+ T HAE++A+      C
Sbjct: 24  WMAKAFDMAVEALENGEVPVGCLMVYNNEIIGKGRNEVNETKNATRHAEMVALDQVLDWC 83

Query: 64  RILSQ---EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109
           R+  +   E+  +  LYVT+EPC MCAAA+ L RI  + YG  N + GG
Sbjct: 84  RLREKDCKEVCEQTVLYVTVEPCIMCAAALRLLRIPFVVYGCKNERFGG 132


>gi|18266045|gb|AAL67435.1|AF458409_1 deoxycytidine deaminase [Brassica oleracea]
          Length = 185

 Score = 77.8 bits (190), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 41/97 (42%), Positives = 60/97 (61%), Gaps = 1/97 (1%)

Query: 7   FMSCALEEA-QNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           F++ A+EEA +     +  P GAV V  N++++   N   +  D TAHAE+ AIR  C+ 
Sbjct: 33  FLTQAVEEAYKGVDCGDGGPFGAVIVHKNEVVASCHNMVLKYTDPTAHAEVTAIREACKK 92

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGA 102
           L+Q  L E ++Y + EPC MC  AI L+R++RL YGA
Sbjct: 93  LNQIELSECEIYASCEPCPMCFGAIHLSRLKRLVYGA 129


>gi|126641614|ref|YP_001084598.1| putative deaminase [Acinetobacter baumannii ATCC 17978]
          Length = 135

 Score = 77.8 bits (190), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 45/113 (39%), Positives = 57/113 (50%), Gaps = 1/113 (0%)

Query: 34  NKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPE-VDLYVTLEPCTMCAAAISL 92
           NK+I    N    L D TAHAEI AIR  C  L    LPE   LYVTLEPCTMC  A+  
Sbjct: 4   NKLIGAGFNAPIGLSDPTAHAEIQAIRAACESLKNYRLPEDATLYVTLEPCTMCVGALVH 63

Query: 93  ARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
           ARI+ + +G + PK G + +  Q       +H      G   ++  Q +  FF
Sbjct: 64  ARIKHVVFGTTEPKAGSLVSARQLLENGYYNHKFTFEHGCLHEKCAQQLSLFF 116


>gi|315605309|ref|ZP_07880353.1| tRNA(Ile)-lysidine synthase (tRNA(Ile)-lysidinesynthetase)
           [Actinomyces sp. oral taxon 180 str. F0310]
 gi|315312989|gb|EFU61062.1| tRNA(Ile)-lysidine synthase (tRNA(Ile)-lysidinesynthetase)
           [Actinomyces sp. oral taxon 180 str. F0310]
          Length = 451

 Score = 77.8 bits (190), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 53/143 (37%), Positives = 70/143 (48%), Gaps = 1/143 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  AL  A  A    ++PVGAV V    +II R  N      D T HAE++A+R     L
Sbjct: 1   MGKALFLANRARETGDVPVGAVVVDAGGRIIGRGWNCREGHHDPTGHAEVVALREAGCAL 60

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L    L VTLEPCTMCA AI  +R+ R+ +GA +PK G   +       A   H  
Sbjct: 61  GTWRLTGCTLVVTLEPCTMCAGAILASRVDRVVFGAWDPKAGAAGSLRDVLRDARMPHPT 120

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+  G+  Q +   ++ FF  RR
Sbjct: 121 EVIGGVLAQEAAMQLRSFFIGRR 143


>gi|300857552|ref|YP_003782535.1| hypothetical protein cpfrc_00135 [Corynebacterium
           pseudotuberculosis FRC41]
 gi|300685006|gb|ADK27928.1| hypothetical protein cpfrc_00135 [Corynebacterium
           pseudotuberculosis FRC41]
 gi|308275531|gb|ADO25430.1| Cytosine/adenosine deaminase [Corynebacterium pseudotuberculosis
           I19]
          Length = 167

 Score = 77.8 bits (190), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 52/145 (35%), Positives = 72/145 (49%), Gaps = 3/145 (2%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
            M  A+ +AQ A    +IPVGAV    + +++ R  NR    +D   HAEI+AIR     
Sbjct: 24  LMRQAIIQAQ-ATPPGDIPVGAVIFGPDGEVLGRGVNRREADRDPLGHAEIMAIREAVAN 82

Query: 66  LSQEI-LPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
                 L +  L VTLEPCTMCA A+  ARI R+++GA  PK G   +           H
Sbjct: 83  HDDGWRLTDCTLAVTLEPCTMCAGALVGARIGRIFFGAYEPKTGACGSAFDVVRDPAVLH 142

Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149
            PE+  GI +     ++  FF+  R
Sbjct: 143 VPEVRGGILQDECAALVTHFFEGLR 167


>gi|304405271|ref|ZP_07386931.1| CMP/dCMP deaminase zinc-binding [Paenibacillus curdlanolyticus YK9]
 gi|304346150|gb|EFM11984.1| CMP/dCMP deaminase zinc-binding [Paenibacillus curdlanolyticus YK9]
          Length = 172

 Score = 77.8 bits (190), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 42/94 (44%), Positives = 53/94 (56%), Gaps = 4/94 (4%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           + CA+E  Q    R E P GA  V N+++I+ A NR    KD T HAE++AIR  C  L 
Sbjct: 17  VDCAMEGTQ----RMEFPFGACLVHNDRVIAIASNRCLSSKDPTMHAEMIAIREACGTLD 72

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
           +  L +  LY T EPC MC  AI  A I R+ YG
Sbjct: 73  RASLQQATLYATTEPCVMCMGAIHWAGIPRIVYG 106


>gi|293194557|ref|ZP_06610019.1| tRNA-specific adenosine deaminase [Actinomyces odontolyticus F0309]
 gi|292819677|gb|EFF78695.1| tRNA-specific adenosine deaminase [Actinomyces odontolyticus F0309]
          Length = 332

 Score = 77.8 bits (190), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 53/139 (38%), Positives = 68/139 (48%), Gaps = 1/139 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  AL  A  A    ++PVGAV V  N +II R  N      D   HAEI+A+R   R  
Sbjct: 1   MGKALFLANRARETGDVPVGAVIVDENGRIIGRGWNCREANHDPAGHAEIVALREAGRAR 60

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L    L VTLEPCTMCA AI  +RI R+ +GA +PK G   +       A   H  
Sbjct: 61  GTWRLTGCTLIVTLEPCTMCAGAILASRIDRVVFGAWDPKAGAAGSLRDVLRDARMPHPT 120

Query: 127 EIYPGISEQRSRQIIQDFF 145
           E+  G+  Q +   ++ FF
Sbjct: 121 EVIGGVLAQEAAMQLRSFF 139


>gi|167581517|ref|ZP_02374391.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia
           thailandensis TXDOH]
          Length = 194

 Score = 77.8 bits (190), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 47/126 (37%), Positives = 68/126 (53%)

Query: 24  IPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83
           +PVGAV V  +++I+R  N      D +AHAE+ A+R   R L    +P  +LYVTLEPC
Sbjct: 49  VPVGAVIVRGDEVIARGFNHPIGGHDPSAHAEMAALRAAARALRNYRMPGCELYVTLEPC 108

Query: 84  TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQD 143
            MC+ AI  ARI R+ +GA +PK G   +    +     +H   +  G+        ++ 
Sbjct: 109 LMCSGAIMHARIARVVFGAPDPKTGACGSVVDAFADVRLNHHTTVEGGVLADECGAALKS 168

Query: 144 FFKERR 149
           FF ERR
Sbjct: 169 FFAERR 174


>gi|223997732|ref|XP_002288539.1| hypothetical protein THAPSDRAFT_268551 [Thalassiosira pseudonana
           CCMP1335]
 gi|220975647|gb|EED93975.1| hypothetical protein THAPSDRAFT_268551 [Thalassiosira pseudonana
           CCMP1335]
          Length = 180

 Score = 77.8 bits (190), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 53/154 (34%), Positives = 79/154 (51%), Gaps = 15/154 (9%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVA---VLNNKIISRAGNRNRELKDVTAHAEILAI-RMG 62
           FM  AL  A+ A    E+PVG +      ++ I+S   N+    +D T HAEI+AI RM 
Sbjct: 5   FMRQALCVARTALDIGEVPVGCIVPYMASHSVIVSHGANQVNATRDATRHAEIVAIDRML 64

Query: 63  CR-------ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
            +        L  EI    DLYVT EPC MCAAA+S+  I R+++G  N + GG  +   
Sbjct: 65  TKGRSSDQLKLPPEIFANCDLYVTCEPCIMCAAALSVMGIGRVFFGCRNDRFGGCGSILH 124

Query: 116 FYTLATC----HHSPEIYPGISEQRSRQIIQDFF 145
            +   T     HH   I+ G+ E+ +  +++ F+
Sbjct: 125 LHKEDTLQSSKHHGFTIHGGLLEEEAVALLRSFY 158


>gi|217071124|gb|ACJ83922.1| unknown [Medicago truncatula]
          Length = 186

 Score = 77.8 bits (190), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 48/125 (38%), Positives = 65/125 (52%), Gaps = 10/125 (8%)

Query: 7   FMSCALEEA-QNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           F+  A+EEA +     +  P GAV V N+++++   N      D TAHAE+ AIR  C+ 
Sbjct: 34  FLRRAVEEAYKGVDCGDGGPFGAVIVHNDEVVASCHNMVLNFTDPTAHAEVTAIREACKK 93

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIE---------NGTQF 116
           L Q  L + ++Y + EPC MC  AI L+RI+RL YGA       I           GT F
Sbjct: 94  LKQIELSDCEIYASCEPCPMCFGAIHLSRIKRLVYGAKAEAAIAIGFDDFIADALRGTGF 153

Query: 117 YTLAT 121
           Y  AT
Sbjct: 154 YQKAT 158


>gi|291303426|ref|YP_003514704.1| CMP/dCMP deaminase zinc-binding protein [Stackebrandtia nassauensis
           DSM 44728]
 gi|290572646|gb|ADD45611.1| CMP/dCMP deaminase zinc-binding protein [Stackebrandtia nassauensis
           DSM 44728]
          Length = 144

 Score = 77.4 bits (189), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 43/127 (33%), Positives = 68/127 (53%), Gaps = 2/127 (1%)

Query: 22  NEIPVGAVAVLNNKI-ISRAGNRNRELKDVTAHAEILAIRMGCRILSQEI-LPEVDLYVT 79
           +++P+GAV    + I ++ A N      D TAHAE++A+R    +      L +  L VT
Sbjct: 13  SDVPIGAVVYSPDGIELAAAHNLREATGDPTAHAELVALRRAAEVHGDGWRLSDCVLVVT 72

Query: 80  LEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139
           +EPCTMCA AI+L+RI  + +GA  PK G + +           H P++Y G+ E     
Sbjct: 73  VEPCTMCAGAITLSRIGTVVFGAWEPKTGAVGSLWDVVRDRRLAHRPQVYSGVLEAECAA 132

Query: 140 IIQDFFK 146
           +++ FF 
Sbjct: 133 LLRGFFS 139


>gi|198443277|pdb|3DH1|A Chain A, Crystal Structure Of Human Trna-Specific Adenosine-34
           Deaminase Subunit Adat2
 gi|198443278|pdb|3DH1|B Chain B, Crystal Structure Of Human Trna-Specific Adenosine-34
           Deaminase Subunit Adat2
 gi|198443279|pdb|3DH1|C Chain C, Crystal Structure Of Human Trna-Specific Adenosine-34
           Deaminase Subunit Adat2
 gi|198443280|pdb|3DH1|D Chain D, Crystal Structure Of Human Trna-Specific Adenosine-34
           Deaminase Subunit Adat2
          Length = 189

 Score = 77.4 bits (189), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 47/155 (30%), Positives = 80/155 (51%), Gaps = 8/155 (5%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M++   +M  A+  A+ A    E+PVG + V NN+++ +  N   + K+ T HAE++AI 
Sbjct: 23  MEETEKWMEEAMHMAKEALENTEVPVGCLMVYNNEVVGKGRNEVNQTKNATRHAEMVAID 82

Query: 61  M---GCRILSQ---EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGT 114
                CR   +   E+     LYVT+EPC MCAAA+ L +I  + YG  N + GG  +  
Sbjct: 83  QVLDWCRQSGKSPSEVFEHTVLYVTVEPCIMCAAALRLMKIPLVVYGCQNERFGGCGSVL 142

Query: 115 QFYT--LATCHHSPEIYPGISEQRSRQIIQDFFKE 147
              +  L       +  PG   + + ++++ F+K+
Sbjct: 143 NIASADLPNTGRPFQCIPGYRAEEAVEMLKTFYKQ 177


>gi|91772283|ref|YP_564975.1| CMP/dCMP deaminase, zinc-binding [Methanococcoides burtonii DSM
           6242]
 gi|91711298|gb|ABE51225.1| Guanine deaminase [Methanococcoides burtonii DSM 6242]
          Length = 159

 Score = 77.4 bits (189), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 47/116 (40%), Positives = 61/116 (52%), Gaps = 3/116 (2%)

Query: 7   FMSCALEEAQNAALRNEI-PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           FM  A++EAQ     NE  P GAV V ++ IIS+  N      D +AHAEI+AIR     
Sbjct: 9   FMDAAVKEAQKGMRNNEGGPFGAVIVKDDTIISKGHNEVLGTNDPSAHAEIVAIRKASAA 68

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGG--GIENGTQFYTL 119
           L    L   +LY T  PC MC +AI  ARI ++YYG S       G ++G  +  L
Sbjct: 69  LEDFDLSGCELYATTMPCPMCLSAIMWARIGKIYYGTSTEDVASLGFDDGDIYAML 124


>gi|113969580|ref|YP_733373.1| CMP/dCMP deaminase, zinc-binding [Shewanella sp. MR-4]
 gi|113884264|gb|ABI38316.1| CMP/dCMP deaminase, zinc-binding [Shewanella sp. MR-4]
          Length = 252

 Score = 77.4 bits (189), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 46/127 (36%), Positives = 62/127 (48%)

Query: 23  EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEP 82
           E+PVGAV V   + I+   N +    D  AHAEI  +R   + +    L +  LYVTLEP
Sbjct: 108 EVPVGAVLVKEGQQIATGYNLSISEHDPCAHAEIQCLRAAGQTIENYRLLDTTLYVTLEP 167

Query: 83  CTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQ 142
           C MCA A+  +RI R+ +GA + K G              +H  EI  G+  Q     + 
Sbjct: 168 CAMCAGAMVHSRIARVVFGAKDEKTGAAGTVLNLLQHPAFNHQVEITSGVLAQDCADQLS 227

Query: 143 DFFKERR 149
            FFK RR
Sbjct: 228 RFFKRRR 234


>gi|289669069|ref|ZP_06490144.1| hypothetical protein XcampmN_11383 [Xanthomonas campestris pv.
           musacearum NCPPB4381]
          Length = 174

 Score = 77.4 bits (189), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 54/147 (36%), Positives = 78/147 (53%), Gaps = 6/147 (4%)

Query: 7   FMSCALEEAQNAALR-NEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           +M  AL  A+ A    +EIPVGA+ V     ++    N N    D +AHAEI+A+R   R
Sbjct: 23  WMQHALHLAERAERDYDEIPVGALVVDAEGNVLGEGWNFNIASHDPSAHAEIVAMREAGR 82

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
            L+   L    LYVTLEPC MCA A+  ARI R+ + AS+PK G    G+ F  LA   H
Sbjct: 83  RLANHRLIGCTLYVTLEPCAMCAMAMIHARIARVVFAASDPKTGAC--GSVFDLLADPRH 140

Query: 125 SPE--IYPGISEQRSRQIIQDFFKERR 149
           +    +  G+    +   + ++F+ +R
Sbjct: 141 NHHVRVSGGVLAAEASLRLTNYFRAKR 167


>gi|33861475|ref|NP_893036.1| putative cytidine/deoxycytidylate deaminase [Prochlorococcus
           marinus subsp. pastoris str. CCMP1986]
 gi|33634052|emb|CAE19377.1| putative cytidine/deoxycytidylate deaminase [Prochlorococcus
           marinus subsp. pastoris str. CCMP1986]
          Length = 165

 Score = 77.4 bits (189), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 42/128 (32%), Positives = 65/128 (50%), Gaps = 1/128 (0%)

Query: 23  EIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81
           E+P+ AV +  N + I R  N+     D   HAE++A+R    I +     E  + V LE
Sbjct: 35  ELPITAVIIDENGRCIGRGSNKREINNDPLGHAELIALRQASWIKNDWRFNECSIIVNLE 94

Query: 82  PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141
           PCTMCAAA+  AR+ ++ YG  + K GG           + HH  ++  G+  Q  +  I
Sbjct: 95  PCTMCAAALVQARMGQVIYGTKDDKRGGFGGTIDLSKHESAHHKMKVVGGVLNQDCKNNI 154

Query: 142 QDFFKERR 149
           + +FK+ R
Sbjct: 155 KLWFKKMR 162


>gi|289665842|ref|ZP_06487423.1| hypothetical protein XcampvN_22891 [Xanthomonas campestris pv.
           vasculorum NCPPB702]
          Length = 174

 Score = 77.4 bits (189), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 54/147 (36%), Positives = 78/147 (53%), Gaps = 6/147 (4%)

Query: 7   FMSCALEEAQNAALR-NEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           +M  AL  A+ A    +EIPVGA+ V     ++    N N    D +AHAEI+A+R   R
Sbjct: 23  WMQHALHLAERAERDYDEIPVGALVVDAEGNVLGEGWNFNIASHDPSAHAEIVAMREAGR 82

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
            L+   L    LYVTLEPC MCA A+  ARI R+ + AS+PK G    G+ F  LA   H
Sbjct: 83  RLANHRLIGCTLYVTLEPCAMCAMAMIHARIARVVFAASDPKTGAC--GSVFDLLADPRH 140

Query: 125 SPE--IYPGISEQRSRQIIQDFFKERR 149
           +    +  G+    +   + ++F+ +R
Sbjct: 141 NHHVRVSGGVLAAEASLRLTNYFRAKR 167


>gi|327356422|gb|EGE85279.1| tRNA specific adenosine deaminase [Ajellomyces dermatitidis ATCC
           18188]
          Length = 174

 Score = 77.4 bits (189), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 44/118 (37%), Positives = 61/118 (51%), Gaps = 6/118 (5%)

Query: 13  EEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILP 72
           E+ + A    E PVG V V N+++I    N   +  + T HAE LAI    R   + I  
Sbjct: 3   EKGEEALASGETPVGCVLVHNDEVIGSGMNDTNKSMNGTRHAEFLAIEEVLRSHPRSIFR 62

Query: 73  EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYP 130
           E DLYVT+EPC MCA+A+   +IR +Y+G +N + GG         +   H  P I P
Sbjct: 63  ETDLYVTVEPCIMCASALRQYQIRHVYFGCANERFGGTGG------VLKLHSDPGIDP 114


>gi|206968817|ref|ZP_03229772.1| cytosine deaminase [Bacillus cereus AH1134]
 gi|206735858|gb|EDZ53016.1| cytosine deaminase [Bacillus cereus AH1134]
          Length = 169

 Score = 77.4 bits (189), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 48/106 (45%), Positives = 62/106 (58%), Gaps = 3/106 (2%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIR-MGCR 64
           F+  ALEEA+ A   N  PVGAV V  NN +I+R  NR    KD+TAHAEI AIR  G  
Sbjct: 9   FLQMALEEAEMALKENTYPVGAVIVDGNNNVIARGRNRVHPQKDITAHAEIDAIRNAGEA 68

Query: 65  ILSQEILPE-VDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109
           +   +I  E   +Y TLEPC MC   I  A+I+R+ +  ++  G G
Sbjct: 69  MFDAKIKNEKFTIYSTLEPCPMCTGGILFAKIQRVVWLLNDDLGFG 114


>gi|52140651|ref|YP_086177.1| cytidine/deoxycytidylate deaminase family protein; guanine
           deaminase [Bacillus cereus E33L]
 gi|51974120|gb|AAU15670.1| cytidine/deoxycytidylate deaminase family protein; probable guanine
           deaminase [Bacillus cereus E33L]
          Length = 153

 Score = 77.4 bits (189), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 44/112 (39%), Positives = 64/112 (57%), Gaps = 3/112 (2%)

Query: 7   FMSCALEEAQNAALRNEI--PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           FM  A++ A N   +NE   P GAV V + +I+++  N      D TAHAE+L IR  CR
Sbjct: 6   FMKLAIDLAYNNT-KNEKGKPFGAVLVKDGEIVAKGVNEVLTTHDPTAHAELLTIREACR 64

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116
           ILS   L +  LY + EPC MC +AI  A ++ +YY  ++ +   I  GT++
Sbjct: 65  ILSTSDLSDCILYASGEPCPMCLSAIYWANLKHVYYSYTSQEEEEIGLGTKY 116


>gi|261188113|ref|XP_002620473.1| tRNA-specific adenosine-34 deaminase subunit Tad2p/ADAT2
           [Ajellomyces dermatitidis SLH14081]
 gi|239593348|gb|EEQ75929.1| tRNA-specific adenosine-34 deaminase subunit Tad2p/ADAT2
           [Ajellomyces dermatitidis SLH14081]
 gi|239609090|gb|EEQ86077.1| tRNA-specific adenosine-34 deaminase subunit Tad2p/ADAT2
           [Ajellomyces dermatitidis ER-3]
          Length = 187

 Score = 77.4 bits (189), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 43/119 (36%), Positives = 63/119 (52%)

Query: 13  EEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILP 72
           E+ + A    E PVG V V N+++I    N   +  + T HAE LAI    R   + I  
Sbjct: 3   EKGEEALASGETPVGCVLVHNDEVIGSGMNDTNKSMNGTRHAEFLAIEEVLRSHPRSIFR 62

Query: 73  EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPG 131
           E DLYVT+EPC MCA+A+   +IR +Y+G +N + GG     + ++  +    P I  G
Sbjct: 63  ETDLYVTVEPCIMCASALRQYQIRHVYFGCANERFGGTGGVLKLHSEKSLLKLPGIISG 121


>gi|254499275|ref|ZP_05111951.1| deaminase [Legionella drancourtii LLAP12]
 gi|254351519|gb|EET10378.1| deaminase [Legionella drancourtii LLAP12]
          Length = 143

 Score = 77.4 bits (189), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 53/146 (36%), Positives = 74/146 (50%), Gaps = 7/146 (4%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  A E+A  A    E+PVGAV V N  +++  + N  +   D + HAE+  IR   + L
Sbjct: 1   MQQAYEQAFLAQNEGEVPVGAVLVSNEGELLGASRNAVQNSHDPSDHAEVRVIRQAAQQL 60

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG---IENGTQFYTLATCH 123
               L +  LYVTLEPC MCA  I  ARI+R+ +   + K G    + N  Q Y L   +
Sbjct: 61  KNHRLLDTTLYVTLEPCPMCAGLIVHARIKRVVFATRDFKAGAAGSVYNLLQGYPL---N 117

Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149
           H  +I  GI +     ++ DFFK  R
Sbjct: 118 HKVQIDEGIMQSECALLLSDFFKACR 143


>gi|158318268|ref|YP_001510776.1| CMP/dCMP deaminase zinc-binding [Frankia sp. EAN1pec]
 gi|158113673|gb|ABW15870.1| CMP/dCMP deaminase zinc-binding [Frankia sp. EAN1pec]
          Length = 185

 Score = 77.4 bits (189), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 41/111 (36%), Positives = 56/111 (50%)

Query: 37  ISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIR 96
           + R  N      D TAHAE++A+R     L    L    L VTLEPCTMCA A+ LAR+ 
Sbjct: 60  LGRGHNAREAAGDPTAHAEVVALRQAAARLGSWRLTGATLVVTLEPCTMCAGALVLARVD 119

Query: 97  RLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
           RL YGA + K G + +          +H PE+  G+  Q   + +  FF +
Sbjct: 120 RLVYGAVDDKAGAVGSLWDVVRDRRLNHRPEVVAGVRGQECSEQLAAFFAD 170


>gi|108805662|ref|YP_645599.1| tRNA-adenosine deaminase [Rubrobacter xylanophilus DSM 9941]
 gi|108766905|gb|ABG05787.1| tRNA-adenosine deaminase [Rubrobacter xylanophilus DSM 9941]
          Length = 167

 Score = 77.4 bits (189), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 51/128 (39%), Positives = 69/128 (53%), Gaps = 4/128 (3%)

Query: 24  IPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83
           +PVGAV     ++++ A N      D TAHAE+LAIR     L    L    LY TLEPC
Sbjct: 38  VPVGAVVARGEEVLALASNEREATGDPTAHAELLAIRRAAAALGGWRLTGCTLYSTLEPC 97

Query: 84  TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT--CHHSPEIYPGISEQRSRQII 141
            MCA A   AR+ R+ Y A +PK G    GT   T +    +H+  +  G+  Q S  ++
Sbjct: 98  PMCAGAAWAARLSRIVYAAPDPKAG--YAGTLHNTPSDRRLNHTASVLGGLLAQESATLL 155

Query: 142 QDFFKERR 149
           +DFF+ERR
Sbjct: 156 RDFFRERR 163


>gi|78047755|ref|YP_363930.1| putative cytidine / deoxycytidylate deaminase family protein
           [Xanthomonas campestris pv. vesicatoria str. 85-10]
 gi|78036185|emb|CAJ23876.1| putative cytidine / deoxycytidylate deaminase family protein
           [Xanthomonas campestris pv. vesicatoria str. 85-10]
          Length = 169

 Score = 77.4 bits (189), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 54/147 (36%), Positives = 80/147 (54%), Gaps = 6/147 (4%)

Query: 7   FMSCALEEAQNAALR-NEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           +M  AL+ A+ A    +EIPVGA+ V     ++    N N    D +AHAEI+A+R   R
Sbjct: 18  WMRHALQLAERAERDYDEIPVGALLVDAQGNVLGEGWNFNIASHDPSAHAEIVAMREAGR 77

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
            L+   L    LYVTLEPC MCA A+  ARI R+ + AS+PK G    G+ F  LA   H
Sbjct: 78  RLANHRLIGCTLYVTLEPCAMCAMAMIHARIARVVFAASDPKTGAC--GSVFDLLADPRH 135

Query: 125 SP--EIYPGISEQRSRQIIQDFFKERR 149
           +   ++  G+    +   + ++F+ +R
Sbjct: 136 NHRVQVCGGVLAAEASLRLTNYFRAKR 162


>gi|325928669|ref|ZP_08189845.1| tRNA-adenosine deaminase [Xanthomonas perforans 91-118]
 gi|325540965|gb|EGD12531.1| tRNA-adenosine deaminase [Xanthomonas perforans 91-118]
          Length = 171

 Score = 77.4 bits (189), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 54/147 (36%), Positives = 80/147 (54%), Gaps = 6/147 (4%)

Query: 7   FMSCALEEAQNAALR-NEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           +M  AL+ A+ A    +EIPVGA+ V     ++    N N    D +AHAEI+A+R   R
Sbjct: 20  WMRHALQLAERAERDYDEIPVGALLVDAQGNVLGEGWNFNIASHDPSAHAEIVAMREAGR 79

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
            L+   L    LYVTLEPC MCA A+  ARI R+ + AS+PK G    G+ F  LA   H
Sbjct: 80  RLANHRLIGCTLYVTLEPCAMCAMAMIHARIARVVFAASDPKTGAC--GSVFDLLADPRH 137

Query: 125 SP--EIYPGISEQRSRQIIQDFFKERR 149
           +   ++  G+    +   + ++F+ +R
Sbjct: 138 NHRVQVCGGVLAAEASLRLTNYFRAKR 164


>gi|87302789|ref|ZP_01085600.1| cytidine/deoxycytidylate deaminase family protein [Synechococcus
           sp. WH 5701]
 gi|87282672|gb|EAQ74630.1| cytidine/deoxycytidylate deaminase family protein [Synechococcus
           sp. WH 5701]
          Length = 169

 Score = 77.4 bits (189), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 44/143 (30%), Positives = 71/143 (49%), Gaps = 3/143 (2%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNN--KIISRAGNRNRELKDVTAHAEILAIRMG 62
             +M   L  AQ A    EIPV A+ VL+   + +    NR +  +D   HAE++A+   
Sbjct: 13  QFWMERLLRMAQRAGEAGEIPVAAI-VLDGAGRALGWGTNRRQTHQDPLGHAELVALSQA 71

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
            R++         L VTLEPC MCA A+  AR+ R+ + A + K G +          + 
Sbjct: 72  ARLIHDWRFNACSLLVTLEPCPMCAGALIQARMGRVVFAAGDAKRGALGGCLNLAADPSS 131

Query: 123 HHSPEIYPGISEQRSRQIIQDFF 145
           HH  E+  G+ E  +R++++ +F
Sbjct: 132 HHHMEVMGGVRELEARELLESWF 154


>gi|195953373|ref|YP_002121663.1| CMP/dCMP deaminase zinc-binding [Hydrogenobaculum sp. Y04AAS1]
 gi|195932985|gb|ACG57685.1| CMP/dCMP deaminase zinc-binding [Hydrogenobaculum sp. Y04AAS1]
          Length = 147

 Score = 77.4 bits (189), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 41/99 (41%), Positives = 61/99 (61%), Gaps = 4/99 (4%)

Query: 12  LEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEIL 71
           LE  + A  ++ IPV A+   N++I+S A N  + ++    HAEILAI     +L+ + L
Sbjct: 11  LELCKEAIAQDRIPVSALVTKNDEIVSWAFNGIKSIE----HAEILAIEKAMNVLNTKRL 66

Query: 72  PEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI 110
              D+YV+LEPC MC  AISLARI ++Y+ + + K G I
Sbjct: 67  DGCDIYVSLEPCPMCTYAISLARIEKVYFFSLDDKNGAI 105


>gi|206895932|ref|YP_002246819.1| tRNA-specific adenosine deaminase [Coprothermobacter proteolyticus
           DSM 5265]
 gi|206738549|gb|ACI17627.1| tRNA-specific adenosine deaminase [Coprothermobacter proteolyticus
           DSM 5265]
          Length = 154

 Score = 77.0 bits (188), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 37/108 (34%), Positives = 61/108 (56%)

Query: 42  NRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
           N   +  D TAHAE++A+R     + +  L    +YVTLEPC MC  A+ LAR+ R+ +G
Sbjct: 45  NLREQSHDPTAHAEVVALRDAAAHMGRWNLSGATVYVTLEPCLMCCYALVLARVDRVVFG 104

Query: 102 ASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
           A++ K G +     F +L   +H  E+  G+ E+   +++  FF++ R
Sbjct: 105 ATDQKAGALVTHMDFLSLPFLNHRFEVRGGVLEKSCSKLLSSFFRKLR 152


>gi|290978118|ref|XP_002671783.1| predicted protein [Naegleria gruberi]
 gi|284085355|gb|EFC39039.1| predicted protein [Naegleria gruberi]
          Length = 214

 Score = 77.0 bits (188), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 55/166 (33%), Positives = 82/166 (49%), Gaps = 23/166 (13%)

Query: 6   VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           ++M  AL  AQ A    E+PVG V V +NKI+ R  N+  + K+ T HAE+ A       
Sbjct: 20  IYMREALNMAQKALEELEVPVGCVIVHDNKIVGRGYNKTNQKKNATRHAELEAFDEITEN 79

Query: 66  LSQEI------LPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG---IENGTQ- 115
            S+E+        E  LYVT+EPC MCA+A+ L +I R+  G  N + GG   + N  Q 
Sbjct: 80  YSEELNNNVNFFKECTLYVTVEPCVMCASALILLKIGRVVCGCMNERFGGCGSVLNIHQS 139

Query: 116 -FYTLATCHHSP------------EIYPGISEQRSRQIIQDFFKER 148
            + +L   HH              E   G+ E+   +I+Q F+++ 
Sbjct: 140 CYNSLNHNHHHDQHGNNNQLNWKYECVHGLFEKECIEILQRFYEQE 185


>gi|296413803|ref|XP_002836598.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295630426|emb|CAZ80789.1| unnamed protein product [Tuber melanosporum]
          Length = 179

 Score = 77.0 bits (188), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 46/103 (44%), Positives = 61/103 (59%), Gaps = 2/103 (1%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGN-RNRELKDVTAHAEILAIRMGCRIL 66
           M  AL+ A +A   NE+PVG V V  ++II+   N  NR L   T HAE++AI       
Sbjct: 1   MQSALQIATSALQSNEVPVGCVFVHGSRIIASGRNDTNRSLCG-TRHAELVAIDKILATH 59

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109
              I  E DLYVT+EPC MCA+A+    IR++Y+G SN + GG
Sbjct: 60  PPSIFKETDLYVTVEPCIMCASALRQIGIRKVYFGCSNDRFGG 102


>gi|114046813|ref|YP_737363.1| tRNA-adenosine deaminase [Shewanella sp. MR-7]
 gi|113888255|gb|ABI42306.1| tRNA-adenosine deaminase [Shewanella sp. MR-7]
          Length = 222

 Score = 77.0 bits (188), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 45/127 (35%), Positives = 62/127 (48%)

Query: 23  EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEP 82
           E+PVGAV V   + I+   N +    D  AHAEI  +R   + +    L +  LYVTLEP
Sbjct: 78  EVPVGAVLVKEGQQIAAGYNLSISEHDPCAHAEIQCLRAAGQTIENYRLLDTTLYVTLEP 137

Query: 83  CTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQ 142
           C MCA A+  +RI R+ +GA + K G              +H  E+  G+  Q     + 
Sbjct: 138 CAMCAGAMVHSRIARVVFGAKDEKTGAAGTVLNLLQHPAFNHQVEVASGVLAQDCADQLS 197

Query: 143 DFFKERR 149
            FFK RR
Sbjct: 198 RFFKRRR 204


>gi|256080810|ref|XP_002576669.1| cytidine/deoxycytidylate deaminase-related [Schistosoma mansoni]
 gi|238661948|emb|CAZ32906.1| cytidine/deoxycytidylate deaminase-related [Schistosoma mansoni]
          Length = 165

 Score = 77.0 bits (188), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 53/155 (34%), Positives = 81/155 (52%), Gaps = 21/155 (13%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR---MGCR 64
           M  A E A  A   NE+PVG   V N ++I+   N     +D T HAE++ IR     CR
Sbjct: 1   MDIAFELACEALRCNEVPVGCAFVYNGEVIASGRNEVNATRDATQHAEMVTIRRLEQWCR 60

Query: 65  ILSQE---ILPEVDLYVTLEPCTMCAAAISL---ARIRRLYYGASNPKGGGIENGTQFYT 118
              +E   IL E DL+VT+EPC MCAAAI     A ++ + YGA N + GG        +
Sbjct: 61  NNQKELDKILVECDLFVTVEPCIMCAAAIRFCLPAHLKSITYGARNERFGGCG------S 114

Query: 119 LATCHHSPE-IYP-----GISEQRSRQIIQDFFKE 147
           + + H+SP  + P     G+  + + ++++ F+ +
Sbjct: 115 VLSVHNSPSAVAPLNCISGVEAEAAVELLKKFYAQ 149


>gi|58581831|ref|YP_200847.1| hypothetical protein XOO2208 [Xanthomonas oryzae pv. oryzae
           KACC10331]
 gi|84623733|ref|YP_451105.1| hypothetical protein XOO_2076 [Xanthomonas oryzae pv. oryzae MAFF
           311018]
 gi|188576614|ref|YP_001913543.1| tRNA-specific adenosine deaminase [Xanthomonas oryzae pv. oryzae
           PXO99A]
 gi|58426425|gb|AAW75462.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae
           KACC10331]
 gi|84367673|dbj|BAE68831.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae MAFF
           311018]
 gi|188521066|gb|ACD59011.1| tRNA-specific adenosine deaminase [Xanthomonas oryzae pv. oryzae
           PXO99A]
          Length = 170

 Score = 77.0 bits (188), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 55/147 (37%), Positives = 78/147 (53%), Gaps = 6/147 (4%)

Query: 7   FMSCALEEAQNAAL-RNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           +M  AL  A+ A    +EIPVGA+ V     ++    N N    D +AHAEI+A+R   R
Sbjct: 19  WMQHALHLAECAERDHDEIPVGALIVGAEGNVLGEGWNFNIASHDPSAHAEIVAMRDAGR 78

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
            LS   L    LYVTLEPC MCA A+  ARI R+ + AS+PK G    G+ F  LA   H
Sbjct: 79  RLSNHRLIGCTLYVTLEPCAMCAMAMIHARIARVVFAASDPKTGAC--GSVFDLLADPRH 136

Query: 125 SPEIY--PGISEQRSRQIIQDFFKERR 149
           +  +    G+    +   + ++F+ +R
Sbjct: 137 NHRVRVCGGVLAAEASLRLTNYFRAKR 163


>gi|170106123|ref|XP_001884273.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164640619|gb|EDR04883.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 183

 Score = 77.0 bits (188), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 47/109 (43%), Positives = 65/109 (59%), Gaps = 6/109 (5%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR--MGCR 64
           +M  AL  A+ A   +E+PVG V V +  II++A NR  EL + T HAE+ AI   M  R
Sbjct: 8   WMREALTMAEEALAASEVPVGCVFVRDGIIIAKARNRTNELCNATRHAELEAIDSIMADR 67

Query: 65  ILSQEI----LPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109
            L+ EI    L    LYVT+EPC MCA+A+    I+ ++YG +N + GG
Sbjct: 68  SLTPEISEYPLSNTTLYVTVEPCIMCASALRQMGIKEVFYGCANDRFGG 116


>gi|317153179|ref|YP_004121227.1| CMP/dCMP deaminase zinc-binding protein [Desulfovibrio aespoeensis
           Aspo-2]
 gi|316943430|gb|ADU62481.1| CMP/dCMP deaminase zinc-binding protein [Desulfovibrio aespoeensis
           Aspo-2]
          Length = 165

 Score = 77.0 bits (188), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 47/144 (32%), Positives = 70/144 (48%), Gaps = 1/144 (0%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
            M  A  +A  AA   E P+GA     +  +++ A N    L D TAHAE+L +R     
Sbjct: 17  LMDVAFAQACMAAKEGESPIGAALFAPDGALLAAARNNPVGLNDPTAHAEVLCLRQAAAR 76

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           L    L    L VTLEPC MC  A+  AR+  +  GA +P+ G + +  Q + L   +H 
Sbjct: 77  LGNYRLTGTILAVTLEPCLMCTGALIHARVAGVVMGALDPRAGAVISNLQGHALPFANHR 136

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
                G+ E+    +++ FF E+R
Sbjct: 137 MWFVQGVMEEECSTLLKRFFLEKR 160


>gi|194743340|ref|XP_001954158.1| GF18139 [Drosophila ananassae]
 gi|190627195|gb|EDV42719.1| GF18139 [Drosophila ananassae]
          Length = 160

 Score = 77.0 bits (188), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 45/146 (30%), Positives = 75/146 (51%), Gaps = 9/146 (6%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC--- 63
           FM  A  EA+ A    E+PVG V VL +K+I+R GN     ++ T HAE + I       
Sbjct: 4   FMEEAFIEARRARDAGEVPVGCVFVLGDKVIARGGNEVNVHRNATRHAEFICIDATLAYC 63

Query: 64  ---RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              R+ ++++  E+ + VT+EPC MC+AA+    ++ + YG  N + GG    T     A
Sbjct: 64  REKRLPARQMFSEITVVVTVEPCIMCSAALHTLGVKEIIYGCENDRFGG---KTVVDVAA 120

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFK 146
                 +I  G+    +  ++++F+K
Sbjct: 121 VVGQRIDITGGVRADEAMALLKEFYK 146


>gi|298714567|emb|CBJ27558.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 504

 Score = 77.0 bits (188), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 48/153 (31%), Positives = 72/153 (47%), Gaps = 12/153 (7%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNREL----------KDVTAHAEI 56
           FM  AL  A  A +  E+P+GA+  L   + +R   R R L          +D +AHAE+
Sbjct: 338 FMRMALRLAGRARMEGEVPIGAI--LAETVPTRRDGRRRVLSTGRNEVEGRRDASAHAEM 395

Query: 57  LAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116
           L ++   +  S   L    LYVT+EPC MC +A  L R+ R+ +GA NP  G        
Sbjct: 396 LCLQAAAKARSNWRLAGTTLYVTVEPCAMCLSAAQLFRVDRVVFGAPNPNLGACGGWVDL 455

Query: 117 YTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +     H  E+  G+  +     ++ FF+ RR
Sbjct: 456 SSQRHAFHELEVKGGVLAEECALPLRGFFRSRR 488


>gi|30021149|ref|NP_832780.1| cytosine deaminase [Bacillus cereus ATCC 14579]
 gi|29896702|gb|AAP09981.1| Cytosine deaminase [Bacillus cereus ATCC 14579]
          Length = 169

 Score = 77.0 bits (188), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 47/106 (44%), Positives = 62/106 (58%), Gaps = 3/106 (2%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIR-MGCR 64
           F+  ALEEA+ A   N  PVGAV V  NN +I+R  NR    KD+TAHAE+ AIR  G  
Sbjct: 9   FLQMALEEAEKALKENTYPVGAVIVDGNNNVIARGRNRVHPEKDITAHAELDAIRNAGEA 68

Query: 65  ILSQEILPE-VDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109
           +   +I  E   +Y TLEPC MC   I  A+I+R+ +  ++  G G
Sbjct: 69  MFDAKIKNERFTIYSTLEPCPMCTGGILFAKIQRVVWLLNDDLGFG 114


>gi|298252974|ref|ZP_06976766.1| cytidine and deoxycytidylate deaminase [Gardnerella vaginalis 5-1]
 gi|297532369|gb|EFH71255.1| cytidine and deoxycytidylate deaminase [Gardnerella vaginalis 5-1]
          Length = 153

 Score = 76.6 bits (187), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 54/154 (35%), Positives = 80/154 (51%), Gaps = 8/154 (5%)

Query: 1   MKKGNVF-MSCALEEAQNAALRNEIPVGAVAVLNN--KIISRAGNRNRELKDVTAHAEIL 57
           M+   VF M+ AL  A+ +A   E+PVGAV VL+    II +  N   +  D  AHAE+L
Sbjct: 3   MRDEIVFAMNQALNLARESASAGEVPVGAV-VLDGGGNIIGKGANMREQSADPLAHAEVL 61

Query: 58  AIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFY 117
           A++          L +  L VTLEPC MCA A+   R++R+ +GA + K G    G+ + 
Sbjct: 62  AMKDAAASRKSWNLSDCTLVVTLEPCPMCAGAVLQTRLKRVIFGAWDAKLGAC--GSVWD 119

Query: 118 TLATCH--HSPEIYPGISEQRSRQIIQDFFKERR 149
            L   H    PE+   + E    Q +++FF  +R
Sbjct: 120 ILRDPHVGSRPEVIGSVCESECAQPLRNFFAHQR 153


>gi|255625685|gb|ACU13187.1| unknown [Glycine max]
          Length = 186

 Score = 76.6 bits (187), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 40/102 (39%), Positives = 61/102 (59%), Gaps = 1/102 (0%)

Query: 2   KKGNVFMSCALEEA-QNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           ++ + F+  A+EEA +     +  P GA+ V N++I++R  N      D TAHAE+  IR
Sbjct: 29  QRDHKFLRIAVEEAYKGVDCEDGGPFGAIIVCNDEIVARCHNMVLRNTDPTAHAEVTVIR 88

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGA 102
             C  L+Q  L + ++Y + EPC MC  AI L+R++RL YGA
Sbjct: 89  KACEKLNQIELSDCEIYASCEPCPMCFGAIHLSRVKRLVYGA 130


>gi|331694222|ref|YP_004330461.1| CMP/dCMP deaminase zinc-binding protein [Pseudonocardia
           dioxanivorans CB1190]
 gi|326948911|gb|AEA22608.1| CMP/dCMP deaminase zinc-binding protein [Pseudonocardia
           dioxanivorans CB1190]
          Length = 153

 Score = 76.6 bits (187), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 53/140 (37%), Positives = 76/140 (54%), Gaps = 1/140 (0%)

Query: 11  ALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQE 69
           A++ A+ A    ++P+GAV V  +   ++ A N    L D TAHAEILA+R    +L + 
Sbjct: 14  AIDVARGALGTGDVPIGAVVVDASGAEVATACNAREALGDPTAHAEILALRAAAAVLGEW 73

Query: 70  ILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIY 129
            L    L VTLEPCTMCA AI LAR+ R+ +GA  P+ G   +          +H PE+ 
Sbjct: 74  RLTGCTLVVTLEPCTMCAGAIWLARVPRVVFGAWEPRTGAAGSLWDVLRDRRLNHRPEVV 133

Query: 130 PGISEQRSRQIIQDFFKERR 149
            G+       +++DFF E R
Sbjct: 134 GGVLADECAALLEDFFGELR 153


>gi|291521262|emb|CBK79555.1| Cytosine/adenosine deaminases [Coprococcus catus GD/7]
          Length = 160

 Score = 76.6 bits (187), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 41/124 (33%), Positives = 63/124 (50%)

Query: 22  NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81
           +E+P+G V V   KII+R  N+  + K+  +HAE+ AIR   + L    L    +Y+TLE
Sbjct: 22  DEVPIGCVIVYEGKIIARGYNKRNKEKNTLSHAEMNAIRKASKYLGDWRLEGCTMYITLE 81

Query: 82  PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141
           PC MCA AI  AR+ R+  G+ N K G   +          +H  E+   +  +    ++
Sbjct: 82  PCPMCAGAIVQARVDRVVIGSMNAKAGCAGSVLNVLQERRFNHQVELTKDVLHEECSSML 141

Query: 142 QDFF 145
             FF
Sbjct: 142 SGFF 145


>gi|213025788|ref|ZP_03340235.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp.
          enterica serovar Typhi str. 404ty]
          Length = 98

 Score = 76.6 bits (187), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 41/88 (46%), Positives = 53/88 (60%)

Query: 7  FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
          +M  AL  A+ A    E+PVGAV V N+++I    NR     D TAHAEI+A+R G  +L
Sbjct: 11 WMRHALTLAKRAWDEREVPVGAVLVHNHRVIGEGWNRPIGRHDPTAHAEIMALRQGGLVL 70

Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLAR 94
              L +  LYVTLEPC MCA A+  +R
Sbjct: 71 QNYRLLDTTLYVTLEPCVMCAGAMVHSR 98


>gi|154508436|ref|ZP_02044078.1| hypothetical protein ACTODO_00935 [Actinomyces odontolyticus ATCC
           17982]
 gi|153798070|gb|EDN80490.1| hypothetical protein ACTODO_00935 [Actinomyces odontolyticus ATCC
           17982]
          Length = 435

 Score = 76.6 bits (187), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 53/139 (38%), Positives = 68/139 (48%), Gaps = 1/139 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  AL  A  A    ++PVGAV V  N +II R  N      D   HAEI+A+R   R  
Sbjct: 1   MGKALFLANRARETGDVPVGAVVVDENGRIIGRGWNCREANHDPAGHAEIVALREAGRSR 60

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L    L VTLEPCTMCA AI  +RI R+ +GA +PK G   +       A   H  
Sbjct: 61  GTWRLTGCTLIVTLEPCTMCAGAILASRIDRVVFGAWDPKAGAAGSLRDVLRDARMPHPT 120

Query: 127 EIYPGISEQRSRQIIQDFF 145
           E+  G+  Q +   ++ FF
Sbjct: 121 EVIGGVLAQEAAMQLRSFF 139


>gi|195443952|ref|XP_002069651.1| GK11635 [Drosophila willistoni]
 gi|194165736|gb|EDW80637.1| GK11635 [Drosophila willistoni]
          Length = 160

 Score = 76.6 bits (187), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 46/146 (31%), Positives = 75/146 (51%), Gaps = 9/146 (6%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG---C 63
           FM  AL EA+ A    E+PVG V V  +K+I+R GN     ++ T HAE + I      C
Sbjct: 4   FMEDALVEARRARDAGEVPVGCVFVYGDKVIARGGNEVNVYRNATRHAEFICIDATLAYC 63

Query: 64  R---ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
           R   + ++++  E+ + VT+EPC MC+AA+    ++ + YG  N + GG    T     A
Sbjct: 64  REKHLPARQLFAEISVVVTVEPCIMCSAALHTLGVKEIIYGCENDRFGG---KTVVDVAA 120

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFK 146
                  I  G+    +  ++++F+K
Sbjct: 121 VVGQRISIIGGVRGDEAMALLKEFYK 146


>gi|24374802|ref|NP_718845.1| cytidine/deoxycytidylate deaminase family protein [Shewanella
           oneidensis MR-1]
 gi|24349479|gb|AAN56289.1|AE015766_5 cytidine/deoxycytidylate deaminase family protein [Shewanella
           oneidensis MR-1]
          Length = 194

 Score = 76.6 bits (187), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 45/126 (35%), Positives = 62/126 (49%)

Query: 24  IPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83
           +PVGAV V +   I+   N +    D  AHAEIL +R   + +    L +  LYVTLEPC
Sbjct: 54  VPVGAVLVKDGLQIATGYNLSISQHDPCAHAEILCLRAAGQTVENYRLLDATLYVTLEPC 113

Query: 84  TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQD 143
            MCA A+  +RI R+ +GA + K G              +H  E+  G+  Q     +  
Sbjct: 114 AMCAGAMVHSRIARVVFGARDEKTGAAGTVLNLLQHPAFNHQVEVTSGVLAQDCADQLSR 173

Query: 144 FFKERR 149
           FFK RR
Sbjct: 174 FFKRRR 179


>gi|225451245|ref|XP_002276494.1| PREDICTED: hypothetical protein [Vitis vinifera]
 gi|298204906|emb|CBI34213.3| unnamed protein product [Vitis vinifera]
          Length = 186

 Score = 76.6 bits (187), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 41/97 (42%), Positives = 59/97 (60%), Gaps = 1/97 (1%)

Query: 7   FMSCALEEA-QNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           F++ A+EEA +     +  P GAV V N++++    N      D TAHAE+ AIR  C+ 
Sbjct: 34  FLTAAVEEAYKGVECGDGGPFGAVVVHNDEVLVSCHNMVLTNTDPTAHAEVTAIREACKK 93

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGA 102
           L+Q  L + ++Y + EPC MC  AI L+RI+RL YGA
Sbjct: 94  LNQIELSDCEIYASCEPCPMCFGAIHLSRIKRLVYGA 130


>gi|148228295|ref|NP_001089483.1| tRNA-specific adenosine deaminase 2 [Xenopus laevis]
 gi|82225873|sp|Q4V7V8|ADAT2_XENLA RecName: Full=tRNA-specific adenosine deaminase 2; AltName:
           Full=Deaminase domain-containing protein 1; AltName:
           Full=tRNA-specific adenosine-34 deaminase subunit ADAT2
 gi|66912051|gb|AAH97698.1| MGC115242 protein [Xenopus laevis]
          Length = 175

 Score = 76.6 bits (187), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 46/160 (28%), Positives = 80/160 (50%), Gaps = 28/160 (17%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM---GC 63
           +M  A + AQ+A    E+PVG + V  N+++ +  N   E K+ T HAE++AI      C
Sbjct: 13  WMHKAFQMAQDALNNGEVPVGCLMVYGNQVVGKGRNEVNETKNATQHAEMVAIDQVLDWC 72

Query: 64  RILSQ---EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI---------- 110
            + S+   ++   + LYVT+EPC MCA A+ L +I  + YG  N + GG           
Sbjct: 73  EMNSKKSTDVFENIVLYVTVEPCIMCAGALRLLKIPLVVYGCRNERFGGCGSVLNVSGDD 132

Query: 111 --ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKER 148
             + GT+F  +           G   +++ ++++ F+K+ 
Sbjct: 133 IPDTGTKFKCIG----------GYQAEKAIELLKTFYKQE 162


>gi|114609579|ref|XP_518775.2| PREDICTED: hypothetical protein LOC463037 isoform 2 [Pan
           troglodytes]
          Length = 191

 Score = 76.6 bits (187), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 46/149 (30%), Positives = 77/149 (51%), Gaps = 8/149 (5%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM---GC 63
           +M  A+  A+ A    E+PVG + V NN+++ +  N   + K+ T HAE++AI      C
Sbjct: 25  WMEEAMHMAKEALENTEVPVGCLMVYNNEVVGKGRNEVNQTKNATRHAEMVAIDQVLDWC 84

Query: 64  RILSQ---EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT-- 118
           R   +   E+     LYVT+EPC MCAAA+ L +I  + YG  N + GG  +     +  
Sbjct: 85  RQSGKSPSEVFEHTVLYVTVEPCIMCAAALRLMKIPLVVYGCQNERFGGCGSVLNIASAD 144

Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKE 147
           L       +  PG   + + ++++ F+K+
Sbjct: 145 LPNTGRPFQCIPGYRAEEAVEMLKTFYKQ 173


>gi|3204108|emb|CAA07230.1| putative cytidine deaminase [Cicer arietinum]
          Length = 186

 Score = 76.6 bits (187), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 41/97 (42%), Positives = 58/97 (59%), Gaps = 1/97 (1%)

Query: 7   FMSCALEEA-QNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           F+  A+EEA +     +  P GAV V N+++++   N      D TAHAE+ AIR  C+ 
Sbjct: 34  FLRKAVEEAYKGVDCGDGGPFGAVIVHNDEVVASCHNMVLNYTDPTAHAEVTAIREACKK 93

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGA 102
           L Q  L + ++Y + EPC MC  AI L+RI+RL YGA
Sbjct: 94  LKQIELSDCEIYASCEPCPMCFGAIHLSRIKRLVYGA 130


>gi|124107608|ref|NP_872309.2| tRNA-specific adenosine deaminase 2 [Homo sapiens]
 gi|74750199|sp|Q7Z6V5|ADAT2_HUMAN RecName: Full=tRNA-specific adenosine deaminase 2; AltName:
           Full=Deaminase domain-containing protein 1; AltName:
           Full=tRNA-specific adenosine-34 deaminase subunit ADAT2
 gi|31652308|emb|CAD92490.1| novel protein similar to yeast and bacterial cytosine deaminase
           [Homo sapiens]
 gi|119568252|gb|EAW47867.1| deaminase domain containing 1, isoform CRA_a [Homo sapiens]
          Length = 191

 Score = 76.6 bits (187), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 46/149 (30%), Positives = 77/149 (51%), Gaps = 8/149 (5%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM---GC 63
           +M  A+  A+ A    E+PVG + V NN+++ +  N   + K+ T HAE++AI      C
Sbjct: 25  WMEEAMHMAKEALENTEVPVGCLMVYNNEVVGKGRNEVNQTKNATRHAEMVAIDQVLDWC 84

Query: 64  RILSQ---EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT-- 118
           R   +   E+     LYVT+EPC MCAAA+ L +I  + YG  N + GG  +     +  
Sbjct: 85  RQSGKSPSEVFEHTVLYVTVEPCIMCAAALRLMKIPLVVYGCQNERFGGCGSVLNIASAD 144

Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKE 147
           L       +  PG   + + ++++ F+K+
Sbjct: 145 LPNTGRPFQCIPGYRAEEAVEMLKTFYKQ 173


>gi|220934212|ref|YP_002513111.1| tRNA-specific adenosine deaminase [Thioalkalivibrio sp. HL-EbGR7]
 gi|219995522|gb|ACL72124.1| tRNA-specific adenosine deaminase [Thioalkalivibrio sp. HL-EbGR7]
          Length = 162

 Score = 76.6 bits (187), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 47/128 (36%), Positives = 68/128 (53%)

Query: 22  NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81
            E+PVGAV V + +++    N      D TAHAEI A+R     +    LP   LYVTLE
Sbjct: 30  GEVPVGAVLVRDGELLGEGCNGPIAAHDPTAHAEIAALRAAAARVGNYRLPGATLYVTLE 89

Query: 82  PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141
           PC MC  A+  AR+ RL YGA++PK G +          + +H  E+  G+  +   + +
Sbjct: 90  PCPMCVGAMIHARVARLVYGAADPKTGAVGGALDLLGHPSHNHRIEVTGGVLAETCAEQL 149

Query: 142 QDFFKERR 149
           + FF+ RR
Sbjct: 150 RAFFRTRR 157


>gi|113816713|gb|AAH37955.2| ADAT2 protein [Homo sapiens]
          Length = 193

 Score = 76.6 bits (187), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 46/149 (30%), Positives = 77/149 (51%), Gaps = 8/149 (5%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM---GC 63
           +M  A+  A+ A    E+PVG + V NN+++ +  N   + K+ T HAE++AI      C
Sbjct: 27  WMEEAMHMAKEALENTEVPVGCLMVYNNEVVGKGRNEVNQTKNATRHAEMVAIDQVLDWC 86

Query: 64  RILSQ---EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT-- 118
           R   +   E+     LYVT+EPC MCAAA+ L +I  + YG  N + GG  +     +  
Sbjct: 87  RQSGKSPSEVFEHTVLYVTVEPCIMCAAALRLMKIPLVVYGCQNERFGGCGSVLNIASAD 146

Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKE 147
           L       +  PG   + + ++++ F+K+
Sbjct: 147 LPNTGRPFQCIPGYRAEEAVEMLKTFYKQ 175


>gi|256823046|ref|YP_003147009.1| CMP/dCMP deaminase zinc-binding [Kangiella koreensis DSM 16069]
 gi|256796585|gb|ACV27241.1| CMP/dCMP deaminase zinc-binding [Kangiella koreensis DSM 16069]
          Length = 159

 Score = 76.6 bits (187), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 43/142 (30%), Positives = 74/142 (52%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  A + A  A  + E+PVGAV   + +I +   N+     D TAHAE++ +R   + L 
Sbjct: 12  MQRAFDLASIAEEKGEVPVGAVLAKDGEIKTEGFNQPIFNHDPTAHAEMVVLRAAGQKLD 71

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
              L +  LYVTLEPC MCA A+  AR+ R+ +  ++P+ G   +        + +H   
Sbjct: 72  NYRLVDTTLYVTLEPCAMCAMAMVHARVSRVVFATTDPRTGAAGSVLNILQNPSFNHQCV 131

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
           +  G+ ++   + ++ FF+ +R
Sbjct: 132 VESGLLQEDCSEQLKRFFRNKR 153


>gi|319948568|ref|ZP_08022697.1| cytidine and deoxycytidylate deaminase family protein [Dietzia
           cinnamea P4]
 gi|319437767|gb|EFV92758.1| cytidine and deoxycytidylate deaminase family protein [Dietzia
           cinnamea P4]
          Length = 143

 Score = 76.3 bits (186), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 48/130 (36%), Positives = 70/130 (53%), Gaps = 2/130 (1%)

Query: 22  NEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEI-LPEVDLYVT 79
            ++PVGAV +  +   ++ A NR     D  AHAE+LA+R   R+L     L +  L VT
Sbjct: 14  EDVPVGAVVIGPDGTELAAATNRRETDGDPFAHAEVLALREAARVLGDGWRLEDCTLVVT 73

Query: 80  LEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139
           LEPCTMCA A   AR+ R+ +GA  P+ G   +           H PE++ G+ E     
Sbjct: 74  LEPCTMCAGAAVAARVGRIVFGAWEPRTGACGSLWDVVRDRRLVHRPEVHGGVLEDECAA 133

Query: 140 IIQDFFKERR 149
           +++DFF+ RR
Sbjct: 134 VLEDFFRARR 143


>gi|309812017|ref|ZP_07705783.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Dermacoccus sp. Ellin185]
 gi|308434075|gb|EFP57941.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Dermacoccus sp. Ellin185]
          Length = 159

 Score = 76.3 bits (186), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 49/146 (33%), Positives = 69/146 (47%), Gaps = 1/146 (0%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELK-DVTAHAEILAIRMGC 63
           + +M  ALE A+      ++PVGA+ V  +  +   G   RE+  D T HAEI+A+R   
Sbjct: 14  DAWMGRALELAREVGAAGDVPVGALVVDPDGEVIGVGANLREVDGDPTGHAEIVAMRRAA 73

Query: 64  RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123
                  L    L VTLEPC MCA A   AR+ R+  GA + K G           +   
Sbjct: 74  ASRGGWRLDGCTLVVTLEPCLMCAGAAVQARLPRIVLGAWDRKAGACGGLWDVVRDSRST 133

Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149
           H  E+  GI E     ++++FF  RR
Sbjct: 134 HRIEVVGGIREDECSAVLKEFFATRR 159


>gi|172041612|ref|YP_001801326.1| putative cytosine/adenosine deaminase [Corynebacterium urealyticum
           DSM 7109]
 gi|171852916|emb|CAQ05892.1| putative cytosine/adenosine deaminase [Corynebacterium urealyticum
           DSM 7109]
          Length = 198

 Score = 76.3 bits (186), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 45/130 (34%), Positives = 69/130 (53%), Gaps = 3/130 (2%)

Query: 22  NEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEI-LPEVDLYVT 79
            ++PVGA+ V  +  +++ A NR  +  D  AHAE+LA+R   R L     L    L VT
Sbjct: 70  GDVPVGALVVDADGTVLATATNRREQDADPLAHAEVLALRQAVRALGDSWRLERCTLVVT 129

Query: 80  LEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139
           LEPC MCA A   AR+ R+ +GA  P+ G   +       A  H + E+  G+ +    Q
Sbjct: 130 LEPCAMCAGAALGARVGRIVFGAYEPRTGACGSVWDLPREALLHKA-EVRGGVLQPECEQ 188

Query: 140 IIQDFFKERR 149
           +++ FF++ R
Sbjct: 189 LLRGFFEKLR 198


>gi|254459431|ref|ZP_05072850.1| guanine deaminase [Campylobacterales bacterium GD 1]
 gi|207083841|gb|EDZ61134.1| guanine deaminase [Campylobacterales bacterium GD 1]
          Length = 152

 Score = 76.3 bits (186), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 52/147 (35%), Positives = 75/147 (51%), Gaps = 5/147 (3%)

Query: 5   NVFMSCALEEAQNAALRNEI-PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
           N +M  A +EA    L N+  P GAV V ++KIIS+A N+  +  D TAHAE+ AIR   
Sbjct: 2   NKWMKIAYDEATEGMLANDGGPFGAVIVKDDKIISQAHNQVLKSNDPTAHAEVNAIRKAS 61

Query: 64  RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKG--GGIENGTQFYTLAT 121
            +L    L    LY +  PC MC  AI  ARI  +YY A+      GG ++  +FY +  
Sbjct: 62  EVLETFDLSGCVLYTSCMPCPMCLGAIFWARIETVYYSATEEDAARGGFDD-KRFYEMLD 120

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKER 148
             +S      I  + S ++  D + E+
Sbjct: 121 GKNSALNLKRIDAENSTKLF-DLWLEK 146


>gi|255076837|ref|XP_002502085.1| predicted protein [Micromonas sp. RCC299]
 gi|226517350|gb|ACO63343.1| predicted protein [Micromonas sp. RCC299]
          Length = 193

 Score = 76.3 bits (186), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 46/112 (41%), Positives = 62/112 (55%), Gaps = 8/112 (7%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI-----RMG 62
           M  ALEEA+ A  R E+PVG V V + ++++   NR  E ++ T HAE  A+     R G
Sbjct: 1   MRVALEEAEGALARWEVPVGCVVVRDGEVVASGSNRTNEKRNGTRHAEFEAVDELLARHG 60

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGT 114
              ++        LYVT+EPC MCA A+SL    R+ YG  N K GG  NG+
Sbjct: 61  GDAVAAG-FDRCSLYVTVEPCIMCAGALSLLGFERVTYGCGNDKFGG--NGS 109


>gi|289643685|ref|ZP_06475797.1| CMP/dCMP deaminase zinc-binding [Frankia symbiont of Datisca
           glomerata]
 gi|289506518|gb|EFD27505.1| CMP/dCMP deaminase zinc-binding [Frankia symbiont of Datisca
           glomerata]
          Length = 163

 Score = 76.3 bits (186), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 48/129 (37%), Positives = 67/129 (51%), Gaps = 1/129 (0%)

Query: 22  NEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80
            ++PVGAV V  +  II R  N     +D TAHAE++A+R          L    L VTL
Sbjct: 30  GDVPVGAVVVDADGTIIGRGRNAREAERDPTAHAEVVALRAAAARAGTWRLSGTTLVVTL 89

Query: 81  EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140
           EPC MCA A+ +AR+ RL YGA +P+ G   +           H  E+  G+ E+   ++
Sbjct: 90  EPCAMCAGALIMARVDRLVYGAYDPRAGAAGSLWDTVRDPRLDHHTEVITGVREEECARL 149

Query: 141 IQDFFKERR 149
           + DFF  RR
Sbjct: 150 LTDFFVARR 158


>gi|162450858|ref|YP_001613225.1| putative zinc-binding hydrolase [Sorangium cellulosum 'So ce 56']
 gi|161161440|emb|CAN92745.1| putative zinc-binding hydrolase [Sorangium cellulosum 'So ce 56']
          Length = 177

 Score = 76.3 bits (186), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 43/128 (33%), Positives = 64/128 (50%), Gaps = 1/128 (0%)

Query: 23  EIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81
           ++PVGA+ V     +++R  NR    +D T HAE+ A+R   R L    L    +Y TLE
Sbjct: 44  DVPVGALVVDAAGTVLARGRNRREIDQDPTGHAEVDALRAAARRLGHWRLEGATVYATLE 103

Query: 82  PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141
           PC MCA A+  ARI RL YG  +PK G ++           +H   +  G+       ++
Sbjct: 104 PCPMCAGALVNARIARLVYGCPDPKAGAVDTLFAIGRDNRLNHRFAVTSGVLADECAGVL 163

Query: 142 QDFFKERR 149
           + FF + R
Sbjct: 164 RAFFAKLR 171


>gi|254525362|ref|ZP_05137414.1| cytosine/adenosine deaminase [Prochlorococcus marinus str. MIT
           9202]
 gi|221536786|gb|EEE39239.1| cytosine/adenosine deaminase [Prochlorococcus marinus str. MIT
           9202]
          Length = 171

 Score = 76.3 bits (186), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 42/128 (32%), Positives = 67/128 (52%), Gaps = 1/128 (0%)

Query: 23  EIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81
           E+P+ ++ +    + I R  NR    KD   HAEI+A+R    I +     E  +   LE
Sbjct: 41  ELPICSIILDERGRCIGRGVNRRNINKDPLGHAEIMALRQASLIKNDWRFNECTIITNLE 100

Query: 82  PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141
           PCTMC++A+  AR+ ++ +GA + K GG+          + HH  EI  G+ E    +I+
Sbjct: 101 PCTMCSSALIQARMGKVIFGAYDKKRGGLGGSIDLSKHESAHHKMEIIGGLLEDECSKIL 160

Query: 142 QDFFKERR 149
           Q +FK+ R
Sbjct: 161 QIWFKKLR 168


>gi|123968475|ref|YP_001009333.1| putative cytidine/deoxycytidylate deaminase [Prochlorococcus
           marinus str. AS9601]
 gi|123198585|gb|ABM70226.1| putative cytidine/deoxycytidylate deaminase [Prochlorococcus
           marinus str. AS9601]
          Length = 145

 Score = 76.3 bits (186), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 43/128 (33%), Positives = 66/128 (51%), Gaps = 1/128 (0%)

Query: 23  EIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81
           E+P+ ++ +    + I R  N     KD   HAEI+A+R    I +     E  +   LE
Sbjct: 15  ELPICSIILDERGRCIGRGVNSRNINKDPLGHAEIMALRQASLIKNDWRFNECTIITNLE 74

Query: 82  PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141
           PCTMC++A+  AR+ ++ +GA + K GG+          + HH  EI  GI E    QI+
Sbjct: 75  PCTMCSSALIQARMGKVIFGAYDKKRGGLGGSIDLSKHESAHHKMEIIGGILEDECSQIL 134

Query: 142 QDFFKERR 149
           Q +FK+ R
Sbjct: 135 QIWFKKLR 142


>gi|325287796|ref|YP_004263586.1| Guanine deaminase [Cellulophaga lytica DSM 7489]
 gi|324323250|gb|ADY30715.1| Guanine deaminase [Cellulophaga lytica DSM 7489]
          Length = 156

 Score = 76.3 bits (186), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 44/110 (40%), Positives = 59/110 (53%), Gaps = 5/110 (4%)

Query: 12  LEEAQNAALR----NEI-PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           ++EA NAAL+    NE  P G V V + KII +  N+     D TAHAE+ AIR  C+ L
Sbjct: 7   MQEAVNAALKGMQNNEGGPFGCVIVKDGKIIGKGNNKVTSTNDPTAHAEVTAIRDACKNL 66

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116
           +   L    +Y + EPC MC  AI  AR  ++YYG+S      I    +F
Sbjct: 67  NSFQLDGCIIYTSCEPCPMCLGAIYWARPEKVYYGSSQADAANIGFDDEF 116


>gi|311741106|ref|ZP_07714931.1| cytidine and deoxycytidylate deaminase [Corynebacterium
           pseudogenitalium ATCC 33035]
 gi|311303908|gb|EFQ79986.1| cytidine and deoxycytidylate deaminase [Corynebacterium
           pseudogenitalium ATCC 33035]
          Length = 143

 Score = 76.3 bits (186), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 50/144 (34%), Positives = 72/144 (50%), Gaps = 3/144 (2%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  AL+ A+ A    ++PVGAV        ++   NR  EL D TAHAE+ AIR   R+ 
Sbjct: 1   MRRALDVAKRAPA-GDVPVGAVLYDAAGTELATGVNRREELADPTAHAEVEAIRQAVRVH 59

Query: 67  SQEI-LPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
                L   +L VTLEPC MCA A+  AR+  + +GA  PK G   +        T   +
Sbjct: 60  GDGWRLSGCELVVTLEPCAMCAGALQAARVSSVVFGAFEPKTGACGSLIDVLRAPTAPFT 119

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
           P++  G+ E     ++++FF   R
Sbjct: 120 PQVRGGVLEGECAGLLRNFFDGLR 143


>gi|121714253|ref|XP_001274737.1| cytidine and deoxycytidylate deaminase zinc-binding domain protein
           [Aspergillus clavatus NRRL 1]
 gi|119402891|gb|EAW13311.1| cytidine and deoxycytidylate deaminase zinc-binding domain protein
           [Aspergillus clavatus NRRL 1]
          Length = 191

 Score = 75.9 bits (185), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 43/139 (30%), Positives = 72/139 (51%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  AL   + A    E PVG V V + ++I    N   +  + T HAE +AI    R  
Sbjct: 21  FMKQALLMGEKALEIGETPVGCVLVRDGQLIGSGMNDTNKSMNGTRHAEFIAIEEMLRSH 80

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
            + +L   DLYVT+EPC MCA+A+   +IR +Y+G +N + GG  +    ++  T     
Sbjct: 81  PRSLLRSTDLYVTVEPCVMCASALRQYQIRSVYFGCANERFGGTGSILSLHSDPTLDPPY 140

Query: 127 EIYPGISEQRSRQIIQDFF 145
            ++ G+  + +  +++ F+
Sbjct: 141 PVHGGLFREEAIMLLRRFY 159


>gi|109072525|ref|XP_001091638.1| PREDICTED: tRNA-specific adenosine deaminase 2 isoform 1 [Macaca
           mulatta]
          Length = 191

 Score = 75.9 bits (185), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 46/149 (30%), Positives = 77/149 (51%), Gaps = 8/149 (5%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM---GC 63
           +M  A+  A+ A    E+PVG + V NN+++ +  N   + K+ T HAE++AI      C
Sbjct: 25  WMEEAMHMAKEALENTEVPVGCLMVYNNEVVGKGRNEVNQTKNATRHAEMVAIDQVLDWC 84

Query: 64  RILSQ---EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT-- 118
           R   +   E+     LYVT+EPC MCAAA+ L +I  + YG  N + GG  +     +  
Sbjct: 85  RRSGKSPSEVFEHTVLYVTVEPCIMCAAALRLMKIPLVVYGCQNERFGGCGSVLNIASAD 144

Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKE 147
           L       +  PG   + + ++++ F+K+
Sbjct: 145 LPNTGRPFQCIPGYRAEEAVEMLKTFYKQ 173


>gi|166712352|ref|ZP_02243559.1| hypothetical protein Xoryp_13070 [Xanthomonas oryzae pv. oryzicola
           BLS256]
          Length = 170

 Score = 75.9 bits (185), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 54/147 (36%), Positives = 78/147 (53%), Gaps = 6/147 (4%)

Query: 7   FMSCALEEAQNAAL-RNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           +M  AL  A+ A    +EIPVGA+ +     ++    N N    D +AHAEI+A+R   R
Sbjct: 19  WMQHALHLAECAERDHDEIPVGALILGAEGNVLGEGWNFNIASHDPSAHAEIVAMRDAGR 78

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
            LS   L    LYVTLEPC MCA A+  ARI R+ + AS+PK G    G+ F  LA   H
Sbjct: 79  RLSNHRLIGCTLYVTLEPCAMCAMAMIHARIARVVFAASDPKTGAC--GSVFDLLADPRH 136

Query: 125 SPEIY--PGISEQRSRQIIQDFFKERR 149
           +  +    G+    +   + ++F+ +R
Sbjct: 137 NHRVRVCGGVLAAEASLRLTNYFRAKR 163


>gi|195501916|ref|XP_002098000.1| GE10118 [Drosophila yakuba]
 gi|194184101|gb|EDW97712.1| GE10118 [Drosophila yakuba]
          Length = 160

 Score = 75.9 bits (185), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 46/146 (31%), Positives = 76/146 (52%), Gaps = 9/146 (6%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEIL---AIRMGC 63
           FM  AL EA+ A    E+PVG V V   K+++R GN     ++ T HAE +   AI   C
Sbjct: 4   FMEEALVEARRARDAGEVPVGCVFVHGGKVVARGGNEVNVHRNATRHAEFICIDAILASC 63

Query: 64  R---ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
           R   + ++++  E+ + VT+EPC MC+AA+    ++ + YG  N + GG    T     A
Sbjct: 64  RERRLPARQLFSEITVVVTVEPCIMCSAALHTLGVKEIIYGCENDRFGG---KTVVDVAA 120

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFK 146
                 +I  G+    +  ++++F+K
Sbjct: 121 VVGQRIQITGGVRADEAMALLKEFYK 146


>gi|21322992|dbj|BAB97621.1| Cytosine/adenosine deaminases [Corynebacterium glutamicum ATCC
           13032]
          Length = 139

 Score = 75.9 bits (185), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 47/130 (36%), Positives = 67/130 (51%), Gaps = 2/130 (1%)

Query: 22  NEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEI-LPEVDLYVT 79
            ++PVGAV      +I++ A NR    +D TAHAEI+A+R   R  S    L +    VT
Sbjct: 10  GDVPVGAVIYAPTGEILATATNRREADRDPTAHAEIIALRRAARRFSDGWRLSDCTAVVT 69

Query: 80  LEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139
           LEPC+MCA A+  ARI R+ +GA  P+ G   +           H  E+  GI E     
Sbjct: 70  LEPCSMCAGALVGARIGRIVFGAFEPRTGACGSVFDVVRDPAVLHKVEVSGGILEPECAA 129

Query: 140 IIQDFFKERR 149
           ++ +FF+  R
Sbjct: 130 LMTEFFELHR 139


>gi|332213485|ref|XP_003255854.1| PREDICTED: tRNA-specific adenosine deaminase 2-like [Nomascus
           leucogenys]
          Length = 191

 Score = 75.9 bits (185), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 46/149 (30%), Positives = 77/149 (51%), Gaps = 8/149 (5%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM---GC 63
           +M  A+  A+ A    E+PVG + V NN+++ +  N   + K+ T HAE++AI      C
Sbjct: 25  WMEEAVRMAKEALENTEVPVGCLMVYNNEVVGKGRNEVNQTKNATRHAEMVAIDQVLDWC 84

Query: 64  RILSQ---EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT-- 118
           R   +   E+     LYVT+EPC MCAAA+ L +I  + YG  N + GG  +     +  
Sbjct: 85  RQSGKSPSEVFEHTVLYVTVEPCIMCAAALRLMKIPLVVYGCQNERFGGCGSVLNIASAD 144

Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKE 147
           L       +  PG   + + ++++ F+K+
Sbjct: 145 LPNTGRPFQCIPGYRAEEAVEMLKTFYKQ 173


>gi|56961816|ref|YP_173538.1| cytosine/adenosine deaminase [Bacillus clausii KSM-K16]
 gi|56908050|dbj|BAD62577.1| cytosine/adenosine deaminase [Bacillus clausii KSM-K16]
          Length = 165

 Score = 75.9 bits (185), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 45/128 (35%), Positives = 63/128 (49%)

Query: 22  NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81
            E+P+GAV +   K+I+ A N         AHAE+LAI    + L    L    LYVTLE
Sbjct: 24  GEVPIGAVIIKEGKLIASAYNLREANHSALAHAELLAIEQANKKLGAWRLEGCTLYVTLE 83

Query: 82  PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141
           PC MCA AI  +RI  + YGA + K G              +H  E+  G+ E+   + +
Sbjct: 84  PCPMCAGAIVQSRIPTVVYGAQDQKAGCAGTLMNLLQEQRFNHRCEVISGVLEEGCGEKL 143

Query: 142 QDFFKERR 149
             FF++ R
Sbjct: 144 SAFFRKLR 151


>gi|317034863|ref|XP_001400634.2| cytidine and deoxycytidylate deaminase zinc-binding domain protein
           [Aspergillus niger CBS 513.88]
          Length = 190

 Score = 75.9 bits (185), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 43/139 (30%), Positives = 69/139 (49%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  AL   + A    E PVG V V + KI+    N   +  + T HAE +AI       
Sbjct: 19  FMKQALLMGEKALETGETPVGCVLVYDKKIVGFGMNDTNKSMNGTRHAEFIAIEEMLETY 78

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
            +  L   DLYVT+EPC MCA+A+   +IR++Y+G  N + GG  +    +   +   S 
Sbjct: 79  PRSALRSTDLYVTVEPCVMCASALRQYQIRKVYFGCGNDRFGGTGSILSLHADRSIDPSY 138

Query: 127 EIYPGISEQRSRQIIQDFF 145
            +  G+  + +  +++ F+
Sbjct: 139 PVQGGLFHKEAIMLLRRFY 157


>gi|325289744|ref|YP_004265925.1| Guanine deaminase [Syntrophobotulus glycolicus DSM 8271]
 gi|324965145|gb|ADY55924.1| Guanine deaminase [Syntrophobotulus glycolicus DSM 8271]
          Length = 154

 Score = 75.9 bits (185), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 44/100 (44%), Positives = 55/100 (55%), Gaps = 1/100 (1%)

Query: 5   NVFMSCALEEAQNAALRNEI-PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
           N+FM  A  EA+      E  P GAV V   K+I+ A N     +D TAHAEI+AIR   
Sbjct: 2   NLFMQQAYREAKTGMTAGEGGPFGAVVVREGKVIASAHNIVLLTQDSTAHAEIVAIRKAE 61

Query: 64  RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
           R+L    L   +LY T  PC MC  AI  ARI ++YYG +
Sbjct: 62  RLLGTHDLSGCELYTTSYPCPMCLGAIMWARISKVYYGCT 101


>gi|226504812|ref|NP_001140513.1| hypothetical protein LOC100272576 [Zea mays]
 gi|194699798|gb|ACF83983.1| unknown [Zea mays]
 gi|195610442|gb|ACG27051.1| cytidine/deoxycytidylate deaminase family protein [Zea mays]
          Length = 186

 Score = 75.9 bits (185), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 41/97 (42%), Positives = 59/97 (60%), Gaps = 1/97 (1%)

Query: 7   FMSCALEEA-QNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           F+S A+EEA +     +  P GAV V N+++I    N   +  D TAHAE+ AIR  C+ 
Sbjct: 34  FLSKAVEEAYRGVDCGDGGPFGAVVVHNDEVIVSCHNMVLKNTDPTAHAEVTAIREACKK 93

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGA 102
           L +  L + ++Y + EPC MC  A+ L+RI+RL YGA
Sbjct: 94  LGKIELSDCEIYASCEPCPMCFGAVHLSRIKRLVYGA 130


>gi|297243273|ref|ZP_06927208.1| cytidine and deoxycytidylate deaminase [Gardnerella vaginalis AMD]
 gi|296888807|gb|EFH27544.1| cytidine and deoxycytidylate deaminase [Gardnerella vaginalis AMD]
          Length = 153

 Score = 75.9 bits (185), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 53/154 (34%), Positives = 81/154 (52%), Gaps = 8/154 (5%)

Query: 1   MKKGNVF-MSCALEEAQNAALRNEIPVGAVAVLNN--KIISRAGNRNRELKDVTAHAEIL 57
           M+   VF M+ AL  A+ +A   E+PVGAV VL+    II +  N   +  D  AHAE+L
Sbjct: 3   MRDEIVFAMNQALNLARESASAGEVPVGAV-VLDGGGNIIGKGANMREQSADPLAHAEVL 61

Query: 58  AIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFY 117
           A++          L +  L VTLEPC MCA A+   R++R+ +GA + K G    G+ + 
Sbjct: 62  AMKDAAISRKSWNLSDCTLVVTLEPCPMCAGAVLQTRLKRVIFGAWDAKLGAC--GSVWD 119

Query: 118 TLATCH--HSPEIYPGISEQRSRQIIQDFFKERR 149
            L   H    PE+   + E    +++++FF  +R
Sbjct: 120 ILRDPHVGSRPEVIGSVCESECARLLRNFFAHQR 153


>gi|326499113|dbj|BAK06047.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 186

 Score = 75.9 bits (185), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 44/109 (40%), Positives = 63/109 (57%), Gaps = 1/109 (0%)

Query: 3   KGNVFMSCALEEAQNAA-LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           K + F+S A+EEA  A    +  P GAV V N+++++   N   +  D TAHAE+ AIR 
Sbjct: 30  KEHKFLSIAVEEAYRAVDCGHGRPFGAVVVRNDQVVASCHNMVLKNTDPTAHAEVTAIRE 89

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI 110
            CR L +  L + ++Y + EP  MC  A+ L+RI+RL YGA      GI
Sbjct: 90  ACRKLGKIDLSDCEMYASCEPFPMCFGAVRLSRIKRLVYGAKAEAAVGI 138


>gi|123448020|ref|XP_001312744.1| Cytidine and deoxycytidylate deaminase zinc-binding region family
           protein [Trichomonas vaginalis G3]
 gi|121894602|gb|EAX99814.1| Cytidine and deoxycytidylate deaminase zinc-binding region family
           protein [Trichomonas vaginalis G3]
          Length = 171

 Score = 75.9 bits (185), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 46/128 (35%), Positives = 67/128 (52%), Gaps = 9/128 (7%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM--GCR 64
           +M  AL+ A +A    E+ VG V + N ++I+  GN+     D T HAE++  +     R
Sbjct: 21  YMQLALKAADDAFDAGEVAVGCVIIHNGQVIASGGNQTNAKNDATRHAELVTFKHLKESR 80

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
              ++IL E  LYVT EPC MCA+AI +  I R+ YG  N + GG       Y +    H
Sbjct: 81  SDYKQILKESTLYVTCEPCIMCASAIKMMGIPRVVYGCLNDRFGGC---GSVYNI----H 133

Query: 125 SPEIYPGI 132
           + EI P +
Sbjct: 134 THEIMPSL 141


>gi|283783769|ref|YP_003374523.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Gardnerella vaginalis 409-05]
 gi|283442021|gb|ADB14487.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Gardnerella vaginalis 409-05]
          Length = 153

 Score = 75.9 bits (185), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 52/153 (33%), Positives = 78/153 (50%), Gaps = 6/153 (3%)

Query: 1   MKKGNVF-MSCALEEAQNAALRNEIPVGAVAVLNN-KIISRAGNRNRELKDVTAHAEILA 58
           M+   VF M+ AL  A+ +A   E+PVGAV +  +  II +  N   +  D  AHAE+LA
Sbjct: 3   MRDEIVFAMNQALNLARESASAGEVPVGAVVLDGSGNIIGKGANMREQSADPLAHAEVLA 62

Query: 59  IRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
           ++          L +  L VTLEPC MCA A+   R++R+ +GA + K G    G+ +  
Sbjct: 63  MKDAATSRKSWNLSDCTLVVTLEPCPMCAGAVLQTRLKRVIFGAWDAKLGAC--GSVWDI 120

Query: 119 LATCH--HSPEIYPGISEQRSRQIIQDFFKERR 149
           L   H    PE+   + E    Q ++ FF  +R
Sbjct: 121 LRDPHVGSRPEVIGSVCEPECAQPLRTFFAHQR 153


>gi|258650784|ref|YP_003199940.1| CMP/dCMP deaminase zinc-binding [Nakamurella multipartita DSM
           44233]
 gi|258554009|gb|ACV76951.1| CMP/dCMP deaminase zinc-binding [Nakamurella multipartita DSM
           44233]
          Length = 159

 Score = 75.9 bits (185), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 50/140 (35%), Positives = 71/140 (50%), Gaps = 1/140 (0%)

Query: 11  ALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQE 69
           AL  A+ A    ++P+GA+ +  +  +I R  N      D TAHAEILA+R       Q 
Sbjct: 16  ALNLARRAPDTGDLPIGALVLDPDGVVIGRGRNAREATGDPTAHAEILALRQAAAARGQW 75

Query: 70  ILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIY 129
            L    L VT+EPCTMCA A+ LARI  + +G   PK G   +           H  ++ 
Sbjct: 76  NLTGCTLAVTVEPCTMCAGAVVLARIETVVFGCWEPKTGAAGSLWDVLRDRRLTHRVQVR 135

Query: 130 PGISEQRSRQIIQDFFKERR 149
            G+ EQ S Q+++ FF + R
Sbjct: 136 GGVLEQESAQLLRTFFADHR 155


>gi|195056037|ref|XP_001994919.1| GH13454 [Drosophila grimshawi]
 gi|193892682|gb|EDV91548.1| GH13454 [Drosophila grimshawi]
          Length = 160

 Score = 75.9 bits (185), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 43/146 (29%), Positives = 76/146 (52%), Gaps = 9/146 (6%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC--- 63
           FM  AL EA+ A    E+PVG V + ++K+I+R GN     ++ T HAE + I       
Sbjct: 4   FMEEALVEARRARDAGEVPVGCVFIHDDKVIARGGNEVNVHRNATRHAEFICIDATLAYC 63

Query: 64  ---RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              R+ ++++  E+ + VT+EPC MC+AA+    ++ + YG  N + GG    +     A
Sbjct: 64  REKRLPARQVFSEISVVVTVEPCIMCSAALHTLAVKEIIYGCENDRFGG---KSVIDVAA 120

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFK 146
                  I  G+  + +  ++++F+K
Sbjct: 121 VVGQRINITGGVRAEEAMTLLKEFYK 146


>gi|118404850|ref|NP_001072562.1| tRNA-specific adenosine deaminase 2 [Xenopus (Silurana) tropicalis]
 gi|123905851|sp|Q0P4H0|ADAT2_XENTR RecName: Full=tRNA-specific adenosine deaminase 2; AltName:
           Full=Deaminase domain-containing protein 1; AltName:
           Full=tRNA-specific adenosine-34 deaminase subunit ADAT2
 gi|112419108|gb|AAI22085.1| deaminase domain containing 1 [Xenopus (Silurana) tropicalis]
          Length = 170

 Score = 75.9 bits (185), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 46/162 (28%), Positives = 82/162 (50%), Gaps = 34/162 (20%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  A + AQ+A    E+PVG + V +N+++ +  N   E K+ T HAE++AI    ++L
Sbjct: 8   WMHKAFQMAQDALNNGEVPVGCLMVYDNQVVGKGRNEVNETKNATRHAEMVAID---QVL 64

Query: 67  ---------SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI------- 110
                    S+++   + LYVT+EPC MCA A+ L +I  + YG  N + GG        
Sbjct: 65  DWCEKNSKKSRDVFENIVLYVTVEPCIMCAGALRLLKIPLVVYGCRNERFGGCGSVLNVA 124

Query: 111 -----ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
                + GT+F  +           G   +++ ++++ F+K+
Sbjct: 125 GDNIPDTGTEFKYIG----------GYQAEKAVELLKTFYKQ 156


>gi|296199377|ref|XP_002747141.1| PREDICTED: tRNA-specific adenosine deaminase 2-like [Callithrix
           jacchus]
          Length = 191

 Score = 75.9 bits (185), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 46/152 (30%), Positives = 78/152 (51%), Gaps = 14/152 (9%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  A+  A+ A    E+PVG + V NN+++ +  N   + K+ T HAE++AI    ++L
Sbjct: 25  WMEEAMHMAKEALENTEVPVGCLMVYNNEVVGKGRNEVNQTKNATRHAEMVAID---QVL 81

Query: 67  ---------SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFY 117
                    S E+     LYVT+EPC MCAAA+ L +I  + YG  N + GG  +     
Sbjct: 82  DWCGRSGKNSSEVFEHTVLYVTVEPCIMCAAALRLMKIPLVVYGCQNERFGGCGSVLNIA 141

Query: 118 T--LATCHHSPEIYPGISEQRSRQIIQDFFKE 147
           +  L       +  PG   + + ++++ F+K+
Sbjct: 142 SADLPNTGRPFQCIPGYRAEEAVEMLKTFYKQ 173


>gi|294790273|ref|ZP_06755431.1| tRNA-specific adenosine deaminase [Scardovia inopinata F0304]
 gi|294458170|gb|EFG26523.1| tRNA-specific adenosine deaminase [Scardovia inopinata F0304]
          Length = 185

 Score = 75.9 bits (185), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 46/143 (32%), Positives = 72/143 (50%), Gaps = 1/143 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M+ AL+ A  AA   ++PVGAV + N  ++IS+  N+ +   D  +HAEI A+R   ++ 
Sbjct: 39  MALALKNAVRAAQAGDVPVGAVLLDNRGRLISQGYNQRQARADPLSHAEIEALRAAGQVK 98

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L    L VT+EPC MCA A     + R+ +G  +PK G   +             P
Sbjct: 99  GDWNLAGCSLIVTMEPCPMCAGAAVSVHLGRIVFGTWDPKMGACGSVWDIPRDPHVGSQP 158

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+  GI  Q   +++  FF++ R
Sbjct: 159 EVVGGILRQDCSRLLSHFFQKTR 181


>gi|242219384|ref|XP_002475472.1| predicted protein [Postia placenta Mad-698-R]
 gi|220725331|gb|EED79323.1| predicted protein [Postia placenta Mad-698-R]
          Length = 175

 Score = 75.9 bits (185), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 41/109 (37%), Positives = 64/109 (58%), Gaps = 6/109 (5%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAE------ILAIR 60
           +M  A++ A+ A    E+PVG + V + ++I++A NR  +L++ T HAE      ILA +
Sbjct: 10  WMRQAMQMAEIALAHGEVPVGCIFVRDGRVIAQARNRTNKLRNATRHAELEAIDEILADK 69

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109
                L+   L E  LYVT+EPC MCA+A+    I+ ++YG  N + GG
Sbjct: 70  QWTPALTPYPLSETTLYVTVEPCIMCASALRQLGIKEVFYGCENDRFGG 118


>gi|299115717|emb|CBN74282.1| tRNA specific adenosine deaminase [Ectocarpus siliculosus]
          Length = 186

 Score = 75.5 bits (184), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 49/145 (33%), Positives = 77/145 (53%), Gaps = 5/145 (3%)

Query: 6   VFMSCALEEAQNAALRNEIPVGAVAVL--NNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
           V+M  AL+EA+ A  + E+PVG V V     +IIS   N   E  + T HAE++AI    
Sbjct: 16  VYMRLALKEAEMALSKGEVPVGCVVVHKPTARIISCGHNETSEAFNATRHAELVAIDGIL 75

Query: 64  RILSQ-EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFY--TLA 120
           R  +   +L E DL+VT EPC MCAAA+   +I+ + +G SN + GG  +    +  +L 
Sbjct: 76  RAQTDLSLLRECDLFVTCEPCIMCAAALRDVKIKTVVFGCSNDRFGGCGSVLSVHDGSLP 135

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFF 145
              H+   + G+    +  + + F+
Sbjct: 136 ISGHTYPCHSGLLADEAIALFKQFY 160


>gi|62389126|ref|YP_224528.1| cytosine deaminase [Corynebacterium glutamicum ATCC 13032]
 gi|41324459|emb|CAF18799.1| PUTATIVE CYTOSINE DEAMINASE [Corynebacterium glutamicum ATCC 13032]
          Length = 143

 Score = 75.5 bits (184), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 47/130 (36%), Positives = 67/130 (51%), Gaps = 2/130 (1%)

Query: 22  NEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEI-LPEVDLYVT 79
            ++PVGAV      +I++ A NR    +D TAHAEI+A+R   R  S    L +    VT
Sbjct: 14  GDVPVGAVIYAPTGEILATATNRREADRDPTAHAEIIALRRAARRFSDGWRLSDCTAVVT 73

Query: 80  LEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139
           LEPC+MCA A+  ARI R+ +GA  P+ G   +           H  E+  GI E     
Sbjct: 74  LEPCSMCAGALVGARIGRIVFGAFEPRTGACGSVFDVVRDPAVLHKVEVSGGILEPECAA 133

Query: 140 IIQDFFKERR 149
           ++ +FF+  R
Sbjct: 134 LMTEFFELHR 143


>gi|299770668|ref|YP_003732694.1| guanine deaminase (Guanase) (guanine aminase) (guanine
           aminohydrolase) (GAH) (GDEase) [Acinetobacter sp. DR1]
 gi|298700756|gb|ADI91321.1| guanine deaminase (Guanase) (guanine aminase) (guanine
           aminohydrolase) (GAH) (GDEase) [Acinetobacter sp. DR1]
          Length = 160

 Score = 75.5 bits (184), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 46/116 (39%), Positives = 62/116 (53%), Gaps = 6/116 (5%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M+KG  F+  A+E A N   +   P GAV V N ++I+   N+     D TAHAE+LAIR
Sbjct: 1   MEKGEQFLRNAIELAYNNIEKGGRPFGAVVVKNGEVIASGVNQILTTNDPTAHAELLAIR 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116
              +IL    L    +Y +  PC MC AA+ LA I+ + Y  SN      E+GT F
Sbjct: 61  AASQILGSANLEGCSVYASGHPCPMCMAAMRLAGIKSVSYAYSN------EDGTPF 110


>gi|255630329|gb|ACU15521.1| unknown [Glycine max]
          Length = 186

 Score = 75.5 bits (184), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 48/125 (38%), Positives = 65/125 (52%), Gaps = 10/125 (8%)

Query: 7   FMSCALEEA-QNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           F+  A+EEA +    ++  P G V V N++I++   N      D TAHAE+ AIR  C+ 
Sbjct: 34  FLRKAVEEAYKGVDCKDGGPFGVVIVHNDEIVASCHNMVLCNTDPTAHAEVTAIREACKK 93

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIE---------NGTQF 116
           L Q  L + ++Y + EPC MC  AI L+RI+RL YGA       I           GT F
Sbjct: 94  LKQIELADCEIYASCEPCPMCFGAIHLSRIKRLVYGAKAEAAIAIGFDDFIADALRGTGF 153

Query: 117 YTLAT 121
           Y  AT
Sbjct: 154 YQKAT 158


>gi|19551479|ref|NP_599481.1| cytosine/adenosine deaminase [Corynebacterium glutamicum ATCC
           13032]
 gi|145294347|ref|YP_001137168.1| hypothetical protein cgR_0302 [Corynebacterium glutamicum R]
 gi|140844267|dbj|BAF53266.1| hypothetical protein [Corynebacterium glutamicum R]
          Length = 159

 Score = 75.5 bits (184), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 47/130 (36%), Positives = 67/130 (51%), Gaps = 2/130 (1%)

Query: 22  NEIPVGAVA-VLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEI-LPEVDLYVT 79
            ++PVGAV      +I++ A NR    +D TAHAEI+A+R   R  S    L +    VT
Sbjct: 30  GDVPVGAVIYAPTGEILATATNRREADRDPTAHAEIIALRRAARRFSDGWRLSDCTAVVT 89

Query: 80  LEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139
           LEPC+MCA A+  ARI R+ +GA  P+ G   +           H  E+  GI E     
Sbjct: 90  LEPCSMCAGALVGARIGRIVFGAFEPRTGACGSVFDVVRDPAVLHKVEVSGGILEPECAA 149

Query: 140 IIQDFFKERR 149
           ++ +FF+  R
Sbjct: 150 LMTEFFELHR 159


>gi|291397092|ref|XP_002714901.1| PREDICTED: deaminase domain containing 1-like [Oryctolagus
           cuniculus]
          Length = 192

 Score = 75.5 bits (184), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 47/149 (31%), Positives = 77/149 (51%), Gaps = 8/149 (5%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM---GC 63
           +M  A+  A+ A    E+PVG + V NN+++ +  N   + K+ T HAE++AI      C
Sbjct: 26  WMEEAMRMAKEALENIEVPVGCLMVYNNEVVGKGRNEVNQTKNATRHAEMVAIDQVLDWC 85

Query: 64  R---ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT-- 118
           R     S E+     LYVT+EPC MCAAA+ L +I  + YG  N + GG  +     +  
Sbjct: 86  RRSGKSSAEVFEHTVLYVTVEPCIMCAAALRLLKIPLVVYGCQNERFGGCGSVLNIASAD 145

Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKE 147
           L       +  PG   + + ++++ F+K+
Sbjct: 146 LPNTGRPFQCLPGYRAEEAVEMLKTFYKQ 174


>gi|257067545|ref|YP_003153800.1| tRNA-adenosine deaminase [Brachybacterium faecium DSM 4810]
 gi|256558363|gb|ACU84210.1| tRNA-adenosine deaminase [Brachybacterium faecium DSM 4810]
          Length = 162

 Score = 75.5 bits (184), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 48/119 (40%), Positives = 65/119 (54%), Gaps = 1/119 (0%)

Query: 24  IPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEP 82
           +P+GAV V  +  +++ AGNR    +D TAHAEILA+R       +  L    L VTLEP
Sbjct: 34  VPIGAVVVAPDGAVLATAGNRREADEDPTAHAEILALRRAAAATGRWNLTGCTLVVTLEP 93

Query: 83  CTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141
           CTMCA AI LARIRR+  GA +PK G   +          +H  E+  G+  Q    ++
Sbjct: 94  CTMCAGAIVLARIRRVVVGAMDPKAGAAGSLYDLVREPRLNHRVELVTGVRGQECGDLL 152


>gi|168007071|ref|XP_001756232.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162692742|gb|EDQ79098.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 185

 Score = 75.5 bits (184), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 40/97 (41%), Positives = 60/97 (61%), Gaps = 1/97 (1%)

Query: 7   FMSCALEEA-QNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           F+S A+EEA +     +  P GAV V +++II R  N   +  D TAHAE+ A+R  C+ 
Sbjct: 33  FLSKAVEEAYEGVRCGDGGPFGAVVVKDDQIIVRCHNMVLKNMDPTAHAEVTAVREACKK 92

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGA 102
           L +  L + ++Y + EPC MC  AI L++++RL YGA
Sbjct: 93  LERYDLSDCEIYASCEPCPMCFGAIHLSKMKRLVYGA 129


>gi|33240486|ref|NP_875428.1| cytosine/adenosine deaminase [Prochlorococcus marinus subsp.
           marinus str. CCMP1375]
 gi|33238014|gb|AAQ00081.1| Cytosine/adenosine deaminase [Prochlorococcus marinus subsp.
           marinus str. CCMP1375]
          Length = 164

 Score = 75.5 bits (184), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 45/145 (31%), Positives = 72/145 (49%), Gaps = 3/145 (2%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNK--IISRAGNRNRELKDVTAHAEILAIRMGCR 64
           +M    + A+      E+P+ A+ +LN K   I    N   +  D   HAE++A+R    
Sbjct: 17  WMMILRKRAKIVGKEGEVPITAI-ILNEKGHCIGHGRNTRNKRFDPMGHAELVALRQAAW 75

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
           +       E  L VTLEPC MCA A+  AR+ R+ +GA + K GG+       T  + HH
Sbjct: 76  LKGDWRFNECTLIVTLEPCQMCAGALIQARMGRVIFGAYDFKRGGLGGTLDLSTHKSAHH 135

Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149
              +  G+ ++  +Q I+++F  RR
Sbjct: 136 KMIVKGGVMKKEIKQEIEEWFSLRR 160


>gi|88855909|ref|ZP_01130571.1| cytosine/adenosine deaminase [marine actinobacterium PHSC20C1]
 gi|88814776|gb|EAR24636.1| cytosine/adenosine deaminase [marine actinobacterium PHSC20C1]
          Length = 155

 Score = 75.5 bits (184), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 54/150 (36%), Positives = 76/150 (50%), Gaps = 1/150 (0%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELK-DVTAHAEILAI 59
           + K + +M+ A+ EA+  A   ++PV A+    N  +   G   REL  D TAHAE++AI
Sbjct: 6   VTKFDQWMTRAVAEAKLTADSADVPVAALVFDENDNLVSIGRNERELTGDPTAHAEVVAI 65

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
           R          L  + L VTLEPCTMCA AI  ARI R+ +GA + K G   +       
Sbjct: 66  RAAAAATGSWRLDTMTLVVTLEPCTMCAGAILQARIPRVVFGAWDEKAGAAGSVNDLLRD 125

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
               H  E+  GI E     ++ +FF+ RR
Sbjct: 126 RRLPHKVEVVAGIQEAECAALLTEFFEARR 155


>gi|311065133|ref|YP_003971859.1| cytosine/adenosine deaminase [Bifidobacterium bifidum PRL2010]
 gi|310867453|gb|ADP36822.1| Cytosine/adenosine deaminase [Bifidobacterium bifidum PRL2010]
          Length = 150

 Score = 75.1 bits (183), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 49/144 (34%), Positives = 70/144 (48%), Gaps = 3/144 (2%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNK--IISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M  A+   + A  + ++PVGAV VL+ +  +I R  NR  E  D  AHAEI A+R   + 
Sbjct: 8   MCEAIALGERAGKQGDVPVGAV-VLDERGTVIGRGRNRREEGHDPLAHAEIEAMREAAQA 66

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
                L +  L VTLEPC MCA A     I R+ +GA + K G   +           H 
Sbjct: 67  RGDWNLADCTLVVTLEPCPMCAGACIQTHIGRIVFGAWDAKLGACGSIWDIPRDPHVGHV 126

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
           P++  G+ E    +++  FF  RR
Sbjct: 127 PQVVGGVREAACARLLTGFFASRR 150


>gi|297679305|ref|XP_002817478.1| PREDICTED: tRNA-specific adenosine deaminase 2-like [Pongo abelii]
          Length = 191

 Score = 75.1 bits (183), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 45/150 (30%), Positives = 75/150 (50%), Gaps = 8/150 (5%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  A+  A+ A    E+PVG + V NN+++ +  N   + K+ T HAE++AI       
Sbjct: 25  WMEEAMHMAKEALENTEVPVGCLMVYNNEVVGKGRNEVNQTKNATRHAEMVAIDQVLDWC 84

Query: 67  SQ------EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT-- 118
            Q      E+     LYVT+EPC MCAAA+ L +I  + YG  N + GG  +     +  
Sbjct: 85  LQSGKSPSEVFEHTVLYVTVEPCIMCAAALRLMKIPLVVYGCQNERFGGCGSVLNIASAD 144

Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKER 148
           L       +  PG   + + ++++ F+K+ 
Sbjct: 145 LPNTGRPFQCIPGYRAEEAVEMLKTFYKQE 174


>gi|332707396|ref|ZP_08427446.1| cytosine/adenosine deaminase [Lyngbya majuscula 3L]
 gi|332353887|gb|EGJ33377.1| cytosine/adenosine deaminase [Lyngbya majuscula 3L]
          Length = 150

 Score = 75.1 bits (183), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 37/92 (40%), Positives = 52/92 (56%)

Query: 25  PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84
           P GAV V + +II++A N+     D TAHAEI+AIR  C++L    L   +LY + EPC 
Sbjct: 19  PFGAVVVKDGEIIAKAHNQVTSTNDPTAHAEIVAIRDACKVLQTFQLTGCELYTSCEPCP 78

Query: 85  MCAAAISLARIRRLYYGASNPKGGGIENGTQF 116
           MC  AI  AR+ ++YY  +      I    +F
Sbjct: 79  MCLGAIYWARLDKVYYANTKADAAQIGFDDKF 110


>gi|320095329|ref|ZP_08027018.1| tRNA-specific adenosine deaminase [Actinomyces sp. oral taxon 178
           str. F0338]
 gi|319977741|gb|EFW09395.1| tRNA-specific adenosine deaminase [Actinomyces sp. oral taxon 178
           str. F0338]
          Length = 443

 Score = 75.1 bits (183), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 49/144 (34%), Positives = 75/144 (52%), Gaps = 3/144 (2%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNN--KIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M  AL  A  A    ++PVGAV VL+   +++ +  N   + +D   HAEI+A+R   R 
Sbjct: 11  MGKALYLADRARETGDVPVGAV-VLDTLGRVVGKGWNCREKDRDPAGHAEIVALRDAART 69

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           L +  L    L V+LEPCTMCA AI  AR+ R+ +GA +PK G   +       +  +H 
Sbjct: 70  LKRWNLVGCTLVVSLEPCTMCAGAIVSARVDRVVFGAWDPKAGAAGSVRDVLRDSRLNHQ 129

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
            E+  G+    +   ++ FF  +R
Sbjct: 130 VEVVGGVLGHEAAMQLRSFFAGKR 153


>gi|310288270|ref|YP_003939529.1| tRNA-specific adenosine deaminase [Bifidobacterium bifidum S17]
 gi|309252207|gb|ADO53955.1| tRNA-specific adenosine deaminase [Bifidobacterium bifidum S17]
          Length = 150

 Score = 75.1 bits (183), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 49/144 (34%), Positives = 70/144 (48%), Gaps = 3/144 (2%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNK--IISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M  A+   + A  + ++PVGAV VL+ +  +I R  NR     D  AHAEI A+R   + 
Sbjct: 8   MCEAIALGERAGKQGDVPVGAV-VLDERGTVIGRGRNRREAGHDPLAHAEIEAMREAAQA 66

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
                L +  L VTLEPC MCA A    RI R+ +GA + K G   +           H 
Sbjct: 67  RGDWNLADCTLVVTLEPCPMCAGACIQTRIGRIVFGAWDAKLGACGSIWDIPRDPHVGHV 126

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
           P++  G+ E    +++  FF  RR
Sbjct: 127 PQVVGGVREAACARLLTGFFASRR 150


>gi|159903565|ref|YP_001550909.1| putative cytidine/deoxycytidylate deaminase [Prochlorococcus
           marinus str. MIT 9211]
 gi|159888741|gb|ABX08955.1| putative cytidine/deoxycytidylate deaminase [Prochlorococcus
           marinus str. MIT 9211]
          Length = 165

 Score = 75.1 bits (183), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 42/145 (28%), Positives = 74/145 (51%), Gaps = 3/145 (2%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNK--IISRAGNRNRELKDVTAHAEILAIRMGCR 64
           +M   L  A      +E+PV A+ +L+NK   I    N     +D   HAE++A+R    
Sbjct: 17  WMRRLLNRANELGKEDEVPVIAM-ILDNKGHCIGHGRNTRNTERDPLGHAELVALRQAKW 75

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
           +       +  + VTLEPC MCA A+  AR+ ++ +GA + K GG+          + HH
Sbjct: 76  LKKDWRFNDCTIIVTLEPCQMCAGALIQARMGKVIFGAPDTKRGGLGGSIDLSIHKSAHH 135

Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149
              ++ G+ +  ++++I+ +F +RR
Sbjct: 136 KMIVHGGVMKYEAQELIRKWFSQRR 160


>gi|194033488|ref|XP_001924271.1| PREDICTED: tRNA-specific adenosine deaminase 2 isoform 1 [Sus
           scrofa]
          Length = 191

 Score = 75.1 bits (183), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 78/152 (51%), Gaps = 14/152 (9%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  A++ A+ A    E+PVG + V NN+++ +  N   + K+ T HAE++AI    ++L
Sbjct: 25  WMEQAMQMAKEALENTEVPVGCLMVYNNEVVGKGRNEVNQTKNATRHAEMVAID---QVL 81

Query: 67  S---------QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFY 117
                      E+     LYVT+EPC MCAAA+ L +I  + YG  N + GG  +     
Sbjct: 82  DWCHRGGKSPSEVFERTVLYVTVEPCIMCAAALRLMKIPLVVYGCQNERFGGCGSVLDIA 141

Query: 118 T--LATCHHSPEIYPGISEQRSRQIIQDFFKE 147
           +  L       +  PG   + + ++++ F+K+
Sbjct: 142 SADLPNTGRPFQCIPGYRAEEAVEMLKTFYKQ 173


>gi|325121723|gb|ADY81246.1| guanine deaminase (Guanase) [Acinetobacter calcoaceticus PHEA-2]
          Length = 145

 Score = 75.1 bits (183), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 51/138 (36%), Positives = 71/138 (51%), Gaps = 7/138 (5%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M+KG  F+  A+E A N   +   P GAV V N +II+   N+     D TAHAE+LAIR
Sbjct: 1   MEKGEQFLRKAIELAYNNIEKGGRPFGAVVVKNGEIIASGVNQILVTNDPTAHAELLAIR 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              ++L    L    +Y +  PC MC AA+ LA I+ + Y  SN      E+GT F  L+
Sbjct: 61  AASQVLGSANLEGCSVYASGHPCPMCMAAMRLAGIKSVSYAYSN------EDGTPF-GLS 113

Query: 121 TCHHSPEIYPGISEQRSR 138
           T     E+    +EQ  +
Sbjct: 114 TAEIYIELAKPFAEQSMK 131


>gi|311030254|ref|ZP_07708344.1| hypothetical protein Bm3-1_06896 [Bacillus sp. m3-13]
          Length = 158

 Score = 75.1 bits (183), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 43/116 (37%), Positives = 55/116 (47%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M     F+  A++ A      N  P GAV   NN+II+   NR     D TAHAE++AIR
Sbjct: 3   MHLHEFFLHRAIDLALQNVQENGGPFGAVITKNNQIIAEGVNRVTSNHDPTAHAEVMAIR 62

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116
             C  L    L +  LY + EPC MC  AI  ARI  +Y+ A       I    +F
Sbjct: 63  KACHSLQTFELRDCILYSSCEPCPMCLGAIYWARIPTVYFAADRKDAASIHFDDEF 118


>gi|67481305|ref|XP_656002.1| cytidine/deoxycytidylate deaminase family protein [Entamoeba
           histolytica HM-1:IMSS]
 gi|56473174|gb|EAL50617.1| cytidine/deoxycytidylate deaminase family protein [Entamoeba
           histolytica HM-1:IMSS]
          Length = 166

 Score = 75.1 bits (183), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 44/112 (39%), Positives = 66/112 (58%), Gaps = 7/112 (6%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNK--IISRAGNRNRELKDVTAHAEILA 58
           M+    +M+ AL+  Q A    E+PVG V V+N+K  I+++  N  +E +D T HAEI+ 
Sbjct: 1   MQDDKYYMNEALKMGQEALNIGEVPVGCV-VINSKGEIVAKGRNHTKEFQDGTQHAEIVC 59

Query: 59  IRMGCRILSQEI-LPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109
           I    +++ + + L E  LYVT EPC MCA A+    I ++ YG SN + GG
Sbjct: 60  IN---QLVEKHVHLSECILYVTCEPCIMCAEALKQCGITKIIYGCSNARFGG 108


>gi|297813065|ref|XP_002874416.1| cytidine/deoxycytidylate deaminase family protein [Arabidopsis
           lyrata subsp. lyrata]
 gi|297320253|gb|EFH50675.1| cytidine/deoxycytidylate deaminase family protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 185

 Score = 75.1 bits (183), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 39/97 (40%), Positives = 60/97 (61%), Gaps = 1/97 (1%)

Query: 7   FMSCALEEA-QNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           F++ A+EEA +     +  P GAV V  +++++   N   +  D TAHAE+ AIR  C+ 
Sbjct: 33  FLTQAVEEAYKGVDCGDGGPFGAVIVHKDEVVASCHNMVLKYTDPTAHAEVTAIREACKK 92

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGA 102
           L++  L E ++Y + EPC MC  AI L+R++RL YGA
Sbjct: 93  LNKIELSECEIYASCEPCPMCFGAIHLSRLKRLVYGA 129


>gi|114778043|ref|ZP_01452943.1| cytidine/deoxycytidylate deaminase family protein [Mariprofundus
           ferrooxydans PV-1]
 gi|114551649|gb|EAU54202.1| cytidine/deoxycytidylate deaminase family protein [Mariprofundus
           ferrooxydans PV-1]
          Length = 157

 Score = 74.7 bits (182), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 46/120 (38%), Positives = 64/120 (53%)

Query: 23  EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEP 82
           E+PVGA+ VL +       N    L D +AHAE+ A+R  C  +    L +  LYVTLEP
Sbjct: 23  EVPVGALVVLPDGREFAGHNAPITLHDPSAHAEMRAMRAACAAVGNYRLNDATLYVTLEP 82

Query: 83  CTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQ 142
           CTMCA AI  ARI R+ YGA +PK G + +  Q       +H P +  G+       +++
Sbjct: 83  CTMCAGAIVHARIGRVVYGADDPKTGAVTSLYQILADHRLNHQPTVTSGVMADECSALLK 142


>gi|218441962|ref|YP_002380291.1| CMP/dCMP deaminase zinc-binding [Cyanothece sp. PCC 7424]
 gi|218174690|gb|ACK73423.1| CMP/dCMP deaminase zinc-binding [Cyanothece sp. PCC 7424]
          Length = 158

 Score = 74.7 bits (182), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 36/79 (45%), Positives = 48/79 (60%)

Query: 25  PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84
           P GAV V   KII++  N+     D TAHAE++AIR  C++L    L   +LY + EPC 
Sbjct: 27  PFGAVIVKEGKIIAKGYNQVISSNDPTAHAEVVAIRHACQVLQNFDLKGCELYTSCEPCP 86

Query: 85  MCAAAISLARIRRLYYGAS 103
           MC  AI  AR+ ++YYG S
Sbjct: 87  MCLGAIYWARLDKIYYGNS 105


>gi|262276493|ref|ZP_06054302.1| tRNA-specific adenosine-34 deaminase [Grimontia hollisae CIP
           101886]
 gi|262220301|gb|EEY71617.1| tRNA-specific adenosine-34 deaminase [Grimontia hollisae CIP
           101886]
          Length = 174

 Score = 74.7 bits (182), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 38/101 (37%), Positives = 58/101 (57%)

Query: 49  DVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGG 108
           D TAHAE++A+R   + L    L E  LYVTLEPC MCA+A+  +RI ++ +GA + K G
Sbjct: 52  DATAHAEMMALRQAGKKLQNYRLLEAVLYVTLEPCPMCASAMVHSRIGKVVFGAPDYKTG 111

Query: 109 GIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
              +     +    +H  +   G+ E+  R+ +Q FF+ RR
Sbjct: 112 AAGSVMNLLSYDGVNHHVQFQGGVLEEECREQLQAFFRRRR 152


>gi|326492115|dbj|BAJ98282.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 186

 Score = 74.7 bits (182), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 41/97 (42%), Positives = 58/97 (59%), Gaps = 1/97 (1%)

Query: 7   FMSCALEEA-QNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           F+S A+EEA +     +  P GAV V N+++I    N      D TAHAE+ AIR  C+ 
Sbjct: 34  FLSKAVEEAYKGVDCGHGGPFGAVVVRNDEVIVGCHNMVLNNTDPTAHAEVTAIREACKK 93

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGA 102
           L +  L + ++Y + EPC MC  A+ L+RI+RL YGA
Sbjct: 94  LGKIELSDCEMYASCEPCPMCFGAVHLSRIKRLVYGA 130


>gi|300933920|ref|ZP_07149176.1| putative cytosine/adenosine deaminase [Corynebacterium resistens
           DSM 45100]
          Length = 173

 Score = 74.7 bits (182), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 50/147 (34%), Positives = 74/147 (50%), Gaps = 4/147 (2%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
             +M  ALE A  A  R ++PVGAV    + + ++   N+  +  D   HAEI AIR   
Sbjct: 29  EAWMRRALEVA-GATPRGDVPVGAVVYGPDGRELAVGFNQREKDSDPLGHAEIAAIRAAV 87

Query: 64  RILSQEI-LPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
             L     L +  L VTLEPC MCA A   AR++R+ YGA  PK G   +       A  
Sbjct: 88  AELGDAWRLEDCTLVVTLEPCAMCAGAALGARVKRIVYGAREPKTGACGSVWDLPREAPL 147

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           H + E++ G+       ++++FF++ R
Sbjct: 148 HKA-EVFGGVLRDECEALVKEFFEQLR 173


>gi|116621653|ref|YP_823809.1| guanine deaminase [Candidatus Solibacter usitatus Ellin6076]
 gi|116224815|gb|ABJ83524.1| Guanine deaminase [Candidatus Solibacter usitatus Ellin6076]
          Length = 154

 Score = 74.7 bits (182), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 40/96 (41%), Positives = 51/96 (53%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           N FM  A+E A     R   P  A+ V +  +I+   N+     D TAHAEI+AIR  CR
Sbjct: 3   NTFMQQAIEMAVANVRRGGGPFAALVVKDGIVIASGANQVTRSNDPTAHAEIVAIREACR 62

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
           +L    LP  ++Y T EPC MC  AI  AR   +YY
Sbjct: 63  VLGDFQLPGCEIYTTCEPCPMCLGAIYWARPAAVYY 98


>gi|228953373|ref|ZP_04115419.1| Cytosine deaminase [Bacillus thuringiensis serovar kurstaki str.
           T03a001]
 gi|229080221|ref|ZP_04212748.1| Cytosine deaminase [Bacillus cereus Rock4-2]
 gi|229191139|ref|ZP_04318128.1| Cytosine deaminase [Bacillus cereus ATCC 10876]
 gi|228592289|gb|EEK50119.1| Cytosine deaminase [Bacillus cereus ATCC 10876]
 gi|228703116|gb|EEL55575.1| Cytosine deaminase [Bacillus cereus Rock4-2]
 gi|228806270|gb|EEM52843.1| Cytosine deaminase [Bacillus thuringiensis serovar kurstaki str.
           T03a001]
          Length = 158

 Score = 74.7 bits (182), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 47/102 (46%), Positives = 60/102 (58%), Gaps = 3/102 (2%)

Query: 11  ALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIR-MGCRILSQ 68
           ALEEA+ A   N  PVGAV V  NN +I+R  NR    KD+TAHAEI AIR  G  +   
Sbjct: 2   ALEEAEKALKENTYPVGAVIVDGNNNVIARGRNRVHPQKDITAHAEIDAIRNAGEAMFDA 61

Query: 69  EILPE-VDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109
           +I  E   +Y TLEPC MC   I  A+I+R+ +  ++  G G
Sbjct: 62  KIKNEKFTIYSTLEPCPMCTGGILFAKIQRVVWLLNDDLGFG 103


>gi|148271718|ref|YP_001221279.1| putative cytosine/adenosine deaminase [Clavibacter michiganensis
           subsp. michiganensis NCPPB 382]
 gi|147829648|emb|CAN00564.1| putative cytosine/adenosine deaminase [Clavibacter michiganensis
           subsp. michiganensis NCPPB 382]
          Length = 149

 Score = 74.7 bits (182), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 50/143 (34%), Positives = 73/143 (51%), Gaps = 1/143 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKI-ISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M+ AL+EA+  A   ++PVGAV V  + + I R  N     +D TAHAE+ A+R    + 
Sbjct: 1   MAVALDEARACAATGDVPVGAVVVDADGVVIGRGRNLREARQDPTAHAEVEALREAAAVT 60

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L    L VTLEPC MCA AI  AR+ R+ +GA + K G   +           H  
Sbjct: 61  GDRHLVGTTLVVTLEPCVMCAGAILAARVPRVVFGAWDEKAGAAGSLYDVLRDRRLPHRA 120

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E++ G++ +    ++  FF  RR
Sbjct: 121 EVFAGVAAEECAALLDGFFAGRR 143


>gi|255542370|ref|XP_002512248.1| Guanine deaminase, putative [Ricinus communis]
 gi|223548209|gb|EEF49700.1| Guanine deaminase, putative [Ricinus communis]
          Length = 211

 Score = 74.7 bits (182), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 40/97 (41%), Positives = 59/97 (60%), Gaps = 1/97 (1%)

Query: 7   FMSCALEEA-QNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           F++ A+EEA +     +  P GAV V N++I+    N   +  D TAHAE+ A+R  C+ 
Sbjct: 59  FLTRAVEEAYKGVECGDGGPFGAVVVRNDEIVVSCHNMVLKHTDPTAHAEVTAVREACKK 118

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGA 102
           L +  L + ++Y + EPC MC  AI L+RI+RL YGA
Sbjct: 119 LDRIELSDCEIYASCEPCPMCFGAIHLSRIKRLVYGA 155


>gi|326915810|ref|XP_003204205.1| PREDICTED: tRNA-specific adenosine deaminase 2-like [Meleagris
           gallopavo]
          Length = 165

 Score = 74.3 bits (181), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 43/108 (39%), Positives = 57/108 (52%), Gaps = 6/108 (5%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M   L EAQ A    E+PVG + V + + I +  N   E K+ T HAE++AI        
Sbjct: 1   MHTKLAEAQEALEAGEVPVGCLLVYDGEAIGKGRNEVNETKNATRHAEMVAIDQVLEWCQ 60

Query: 68  Q------EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109
           Q      E+     LYVT+EPC MCAAA+ L +I R+ YG  N + GG
Sbjct: 61  QHKKAHEEVFSHSVLYVTVEPCIMCAAALRLMKIPRVVYGCRNERFGG 108


>gi|124360458|gb|ABN08468.1| CMP/dCMP deaminase, zinc-binding [Medicago truncatula]
          Length = 178

 Score = 74.3 bits (181), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 44/120 (36%), Positives = 67/120 (55%), Gaps = 15/120 (12%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           ++ ++FM  A+++A+ A    E+PVG V V + K+I+   NR  E ++ T HAE+ AI +
Sbjct: 4   QETHIFMELAIQQAKLAMGALEVPVGCVIVEDGKVIASGRNRTTETRNATRHAEMEAIDV 63

Query: 62  GCRILSQ------------EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109
              +L Q            +      LYVT EPC MCA+A+S   I+ ++YG SN K GG
Sbjct: 64  ---LLEQWQKNGLSMTEVAKKFSNCSLYVTCEPCIMCASALSNLGIKEVFYGCSNDKFGG 120


>gi|300113843|ref|YP_003760418.1| CMP/dCMP deaminase zinc-binding protein [Nitrosococcus watsonii
           C-113]
 gi|299539780|gb|ADJ28097.1| CMP/dCMP deaminase zinc-binding protein [Nitrosococcus watsonii
           C-113]
          Length = 155

 Score = 74.3 bits (181), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 40/86 (46%), Positives = 48/86 (55%)

Query: 25  PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84
           P GAV V + +I+ RA N    L+D TAHAE+ AIRM CR L+   L    LY + EPC 
Sbjct: 24  PFGAVVVRDGEILGRACNDVIALRDPTAHAEVQAIRMACRNLNDFHLEGCTLYCSCEPCP 83

Query: 85  MCAAAISLARIRRLYYGASNPKGGGI 110
           MC  A   ARI R+YY A       I
Sbjct: 84  MCLGAAYWARIARIYYAAGQEDAAHI 109


>gi|323358758|ref|YP_004225154.1| cytosine/adenosine deaminase [Microbacterium testaceum StLB037]
 gi|323275129|dbj|BAJ75274.1| cytosine/adenosine deaminase [Microbacterium testaceum StLB037]
          Length = 183

 Score = 74.3 bits (181), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 45/129 (34%), Positives = 64/129 (49%), Gaps = 1/129 (0%)

Query: 22  NEIPVGAVAVLNNKIISRAGNRNRE-LKDVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80
            ++PVGAV V  +  +   G   RE   D TAHAE++A+R     L    L    L VTL
Sbjct: 52  GDVPVGAVVVDASGTVRGEGRNLREATHDPTAHAEVVALRRAAESLGTWHLAGCTLVVTL 111

Query: 81  EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140
           EPC MCA A+  AR+ R+ +GA + K G   +           H  E+  G++E  +   
Sbjct: 112 EPCVMCAGAVLQARVPRVVFGAWDAKAGAAGSMYDVLRDRRLPHRVEVVGGVAEGEASTR 171

Query: 141 IQDFFKERR 149
           ++ FF  RR
Sbjct: 172 LRAFFDVRR 180


>gi|239815773|ref|YP_002944683.1| CMP/dCMP deaminase zinc-binding [Variovorax paradoxus S110]
 gi|239802350|gb|ACS19417.1| CMP/dCMP deaminase zinc-binding [Variovorax paradoxus S110]
          Length = 369

 Score = 74.3 bits (181), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 45/126 (35%), Positives = 68/126 (53%)

Query: 24  IPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83
           +PVGAV V N + ++   N      D +AHAEI A+R G   L    L   +L+VTLEPC
Sbjct: 32  VPVGAVLVRNGQFVASGRNTPVAQHDPSAHAEINALRAGAAALGNYRLDGCELFVTLEPC 91

Query: 84  TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQD 143
            MCA A+  AR+ R+ +GA++PK G   +    +     +H  ++  G+       ++Q 
Sbjct: 92  AMCAGAMLHARLARVVFGAADPKTGAAGSVLDLFAEPRLNHRTQVQGGVLAAECSALLQG 151

Query: 144 FFKERR 149
           FF+ RR
Sbjct: 152 FFQLRR 157


>gi|319955332|ref|YP_004166599.1| guanine deaminase [Cellulophaga algicola DSM 14237]
 gi|319423992|gb|ADV51101.1| Guanine deaminase [Cellulophaga algicola DSM 14237]
          Length = 158

 Score = 74.3 bits (181), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 35/92 (38%), Positives = 51/92 (55%)

Query: 25  PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84
           P GAV V +++II+   NR     D TAHAE++AIR  C+ L+   L +  +Y + EPC 
Sbjct: 27  PFGAVVVKDDEIIAEGYNRVTSTNDPTAHAEVVAIREACKKLNNFELTDCTIYTSCEPCP 86

Query: 85  MCAAAISLARIRRLYYGASNPKGGGIENGTQF 116
           MC  AI   R + +Y+G +      I+   QF
Sbjct: 87  MCLGAIYWTRPKMVYFGCNREDAAAIQFDDQF 118


>gi|89519331|gb|ABD75808.1| putative cytosine/adenosine deaminase [uncultured bacterium]
          Length = 163

 Score = 74.3 bits (181), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 39/98 (39%), Positives = 56/98 (57%), Gaps = 1/98 (1%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M+ AL+EA+ A +R + P+GAV V    II+R+ NR   L+   AHAE  AI   C   
Sbjct: 13  YMAEALKEAELAGIRGDKPIGAVIVHGGNIIARSSNRFHTLQSPVAHAETTAI-FACAPY 71

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASN 104
            ++   E  LY T+EPC MC   I +A IR + +G  +
Sbjct: 72  LEQYKGECTLYTTVEPCVMCLGTIVIAGIRHIVFGVKD 109


>gi|323507722|emb|CBQ67593.1| related to TAD2-tRNA-specific adenosine deaminase 2 [Sporisorium
            reilianum]
          Length = 1276

 Score = 74.3 bits (181), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 49/124 (39%), Positives = 64/124 (51%), Gaps = 18/124 (14%)

Query: 7    FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
            +M  AL  AQ A   NE+PVG V V   ++I+R  NR  EL + T HAE+ AI     I+
Sbjct: 945  WMREALAMAQEALEANEVPVGGVFVRKGQVIARGRNRTNELLNATRHAELEAIDHILSIM 1004

Query: 67   ---------SQEILPEVD-------LYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI 110
                     +    PE D       LYVT+EPC MC AA+    I R+ +GA N + GG 
Sbjct: 1005 PPSAPDFAVAPHSGPEGDNPFKDTTLYVTIEPCIMCGAALRQIGIGRVVFGAGNERFGG- 1063

Query: 111  ENGT 114
             NG+
Sbjct: 1064 -NGS 1066


>gi|228921710|ref|ZP_04085027.1| Cytosine deaminase [Bacillus thuringiensis serovar huazhongensis
           BGSC 4BD1]
 gi|228837922|gb|EEM83246.1| Cytosine deaminase [Bacillus thuringiensis serovar huazhongensis
           BGSC 4BD1]
          Length = 158

 Score = 74.3 bits (181), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 47/102 (46%), Positives = 60/102 (58%), Gaps = 3/102 (2%)

Query: 11  ALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIR-MGCRILSQ 68
           ALEEA+ A   N  PVGAV V  NN +I+R  NR    KD+TAHAEI AIR  G  +   
Sbjct: 2   ALEEAEKALKENTYPVGAVIVDGNNNVIARGRNRVHPQKDITAHAEIDAIRNAGEAMFDA 61

Query: 69  EILPE-VDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109
           +I  E   +Y TLEPC MC   I  A+I+R+ +  ++  G G
Sbjct: 62  KIKNEKFTIYSTLEPCPMCTDGILFAKIQRVVWLLNDDLGFG 103


>gi|94985096|ref|YP_604460.1| tRNA(Ile)-lysidine synthetase-like protein [Deinococcus
           geothermalis DSM 11300]
 gi|94555377|gb|ABF45291.1| tRNA(Ile)-lysidine synthetase-like protein and cytosine deaminase
           [Deinococcus geothermalis DSM 11300]
          Length = 539

 Score = 73.9 bits (180), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 49/128 (38%), Positives = 70/128 (54%), Gaps = 2/128 (1%)

Query: 23  EIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81
           E+PVGAV +  +  +I R  N +RE  D+T HAE+ A+R     L    L +  L VTLE
Sbjct: 404 EVPVGAVVLGPDGAVIGRGRNTSREHGDMTRHAELAALREAAHSLGTPYLTDCTLVVTLE 463

Query: 82  PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141
           PC MC  AI  AR+ R+ YGA NPK G +   T   T A   H P +  G+    + +++
Sbjct: 464 PCPMCLGAILEARVGRVVYGAPNPKAGALGGVTDLLT-AHWGHRPAVTGGLRAGEAARLL 522

Query: 142 QDFFKERR 149
           ++ F+  R
Sbjct: 523 RETFRGLR 530


>gi|227495664|ref|ZP_03925980.1| deaminase [Actinomyces coleocanis DSM 15436]
 gi|226830896|gb|EEH63279.1| deaminase [Actinomyces coleocanis DSM 15436]
          Length = 191

 Score = 73.9 bits (180), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 46/145 (31%), Positives = 67/145 (46%), Gaps = 1/145 (0%)

Query: 6   VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELK-DVTAHAEILAIRMGCR 64
           VFM  A+  A  A    ++PVGA+ V     +   G   RE   D   HAE+  +R    
Sbjct: 47  VFMRQAMNLAAEAERAGDVPVGALLVSEGGEVIATGFNTREAACDPCGHAEVNVLRAAAA 106

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
            L     P   L VTLEPC MCA AI  AR+ R+ +GA +   G   +          +H
Sbjct: 107 KLGTWRFPSYTLVVTLEPCVMCAGAIVSARVGRVVFGAWDRAAGACGSLRDVVRDPRVNH 166

Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149
             E++ G+ E+     + +FF+ +R
Sbjct: 167 QVEVFSGVLEKECETQLLEFFQAKR 191


>gi|255628537|gb|ACU14613.1| unknown [Glycine max]
          Length = 182

 Score = 73.9 bits (180), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 44/115 (38%), Positives = 63/115 (54%), Gaps = 15/115 (13%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  A+++A+ A    E+PVG V   + K+I+   NR  E ++ T HAE+ AI +   +L
Sbjct: 9   FMELAIQQARLALDVLEVPVGCVIAEDGKVIASGRNRTTETRNATRHAEMEAIDV---LL 65

Query: 67  SQ------------EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109
            Q            E      LYVT EPC MCA+A+S+  I+ ++YG SN K GG
Sbjct: 66  GQWQKHGLSMSEVAEKFSNCSLYVTCEPCIMCASALSILGIKEVFYGCSNDKFGG 120


>gi|167540179|ref|XP_001741595.1| tRNA-specific adenosine deaminase [Entamoeba dispar SAW760]
 gi|165893805|gb|EDR21932.1| tRNA-specific adenosine deaminase, putative [Entamoeba dispar
           SAW760]
          Length = 166

 Score = 73.9 bits (180), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 45/112 (40%), Positives = 66/112 (58%), Gaps = 7/112 (6%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNK--IISRAGNRNRELKDVTAHAEILA 58
           M+    +M+ AL+  Q A    E+PVG V V+N+K  I+++  N  +E +D T HAEI+ 
Sbjct: 1   MQDDKYYMNEALKMGQEALNIGEVPVGCV-VINSKGEIVAKGRNHTKEFQDGTQHAEIVC 59

Query: 59  IRMGCRILSQEI-LPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109
           I    +++ + I L E  LYVT EPC MCA A+    I ++ YG SN + GG
Sbjct: 60  IN---QLVEKHIRLNECILYVTCEPCIMCAEALKQCGITKIIYGCSNARFGG 108


>gi|126311160|ref|XP_001380965.1| PREDICTED: similar to DEADC1 protein [Monodelphis domestica]
          Length = 182

 Score = 73.9 bits (180), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 44/143 (30%), Positives = 74/143 (51%), Gaps = 8/143 (5%)

Query: 14  EAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM---GCRILSQ-- 68
           +A+ A    E+PVG + V NNK++++  N   + K+ T HAE++AI      C    +  
Sbjct: 23  QAKEALENGEVPVGCLMVYNNKVLAKGRNEVNQTKNATRHAEMVAIDQVLEWCHRYGKSP 82

Query: 69  -EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT--LATCHHS 125
            E+     LYVT+EPC MCAAA+ L +I  + YG  N + GG  +     +  L      
Sbjct: 83  TEVFEHTVLYVTVEPCIMCAAALRLMKIPLVVYGCQNERFGGCGSVLDIASADLPNTGTP 142

Query: 126 PEIYPGISEQRSRQIIQDFFKER 148
            +  PG   + + ++++ F+K+ 
Sbjct: 143 FQCIPGYQAEEAVEMLKTFYKQE 165


>gi|327394833|dbj|BAK12255.1| tRNA-specific adenosine deaminase TadA [Pantoea ananatis AJ13355]
          Length = 98

 Score = 73.9 bits (180), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 39/82 (47%), Positives = 49/82 (59%)

Query: 7  FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
          +M  AL  AQ A  + E+PVGAV V  +++I    NR     D TAHAEI+A+R G ++L
Sbjct: 16 WMRRALTLAQRAWEQGEVPVGAVLVQGDRVIGEGWNRPIGQHDPTAHAEIMALRQGGKVL 75

Query: 67 SQEILPEVDLYVTLEPCTMCAA 88
              L    LYVTLEPC MCA 
Sbjct: 76 ENYRLLNTTLYVTLEPCIMCAG 97


>gi|255530772|ref|YP_003091144.1| zinc-binding CMP/dCMP deaminase [Pedobacter heparinus DSM 2366]
 gi|255343756|gb|ACU03082.1| CMP/dCMP deaminase zinc-binding [Pedobacter heparinus DSM 2366]
          Length = 160

 Score = 73.9 bits (180), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 35/92 (38%), Positives = 50/92 (54%)

Query: 25  PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84
           P GAV V N K+I+++ N+     D TAHAE+ AIRM C+ L    L    +Y + EPC 
Sbjct: 29  PFGAVIVKNGKVIAKSANKVTSTNDPTAHAEVSAIRMACKKLKTFDLSGCTVYTSCEPCP 88

Query: 85  MCAAAISLARIRRLYYGASNPKGGGIENGTQF 116
           MC +AI  A+I  +Y+  +      I    +F
Sbjct: 89  MCLSAIYWAKIDAIYFANTKDDAANIGFSDKF 120


>gi|301753666|ref|XP_002912694.1| PREDICTED: tRNA-specific adenosine deaminase 2-like [Ailuropoda
           melanoleuca]
          Length = 192

 Score = 73.9 bits (180), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 44/149 (29%), Positives = 76/149 (51%), Gaps = 8/149 (5%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  A++ A+ A    E+PVG + V NN+++ +  N   + K+ T HAE++AI       
Sbjct: 26  WMEEAMQMAKEALENIEVPVGCLMVYNNEVVGKGRNEVNQTKNATRHAEMVAIDQALDWC 85

Query: 67  SQ------EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT-- 118
            +      E+     LYVT+EPC MCAAA+ L +I  + YG  N + GG  +     +  
Sbjct: 86  HRSGKSPSEVFEHTVLYVTVEPCIMCAAALRLMKIPLVVYGCQNERFGGCGSVLNIASAD 145

Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKE 147
           L       +  PG   + + ++++ F+K+
Sbjct: 146 LPNTGRPFKCIPGYRAEEAVEMLKTFYKQ 174


>gi|326502722|dbj|BAJ98989.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 169

 Score = 73.9 bits (180), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 44/101 (43%), Positives = 59/101 (58%), Gaps = 10/101 (9%)

Query: 19  ALRN-EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI-----LSQEILP 72
           AL N E+PVG V V N K+I+   NR    ++ T HAE+ AI +  +      L Q ++ 
Sbjct: 4   ALDNLEVPVGCVIVENGKVIASGSNRTNATRNATRHAEMEAIDVLLQEWQSIGLDQTLVA 63

Query: 73  E----VDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109
           E     DLYVT EPC MCA+A+S+  IR +Y+G  N K GG
Sbjct: 64  EKFAGCDLYVTCEPCIMCASALSILGIREVYFGCPNDKFGG 104


>gi|190689519|gb|ACE86534.1| adenosine deaminase, tRNA-specific 2, TAD2 homolog (S. cerevisiae)
           protein [synthetic construct]
 gi|190690877|gb|ACE87213.1| adenosine deaminase, tRNA-specific 2, TAD2 homolog (S. cerevisiae)
           protein [synthetic construct]
          Length = 160

 Score = 73.9 bits (180), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 44/141 (31%), Positives = 73/141 (51%), Gaps = 8/141 (5%)

Query: 15  AQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM---GCRILSQ--- 68
           A+ A    E+PVG + V NN+++ +  N   + K+ T HAE++AI      CR   +   
Sbjct: 2   AKEALENTEVPVGCLMVYNNEVVGKGRNEVNQTKNATRHAEMVAIDQVLDWCRQSGKSPS 61

Query: 69  EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT--LATCHHSP 126
           E+     LYVT+EPC MCAAA+ L +I  + YG  N + GG  +     +  L       
Sbjct: 62  EVFEHTVLYVTVEPCIMCAAALRLMKIPLVVYGCQNERFGGCGSVLNIASADLPNTGRPF 121

Query: 127 EIYPGISEQRSRQIIQDFFKE 147
           +  PG   + + ++++ F+K+
Sbjct: 122 QCIPGYRAEEAVEMLKTFYKQ 142


>gi|87311104|ref|ZP_01093228.1| putative nucleotide deaminase [Blastopirellula marina DSM 3645]
 gi|87286195|gb|EAQ78105.1| putative nucleotide deaminase [Blastopirellula marina DSM 3645]
          Length = 162

 Score = 73.9 bits (180), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 33/97 (34%), Positives = 57/97 (58%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
            M  A+E+A+      + P G    ++ ++++ + N   +  D TAHAE+ A+R+ C+ +
Sbjct: 12  LMQLAIEKAKQGIAARQSPFGCAIAVDGEVVAVSHNLVLQTVDATAHAEVTALRVACQKV 71

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
            + +LP   +  T EPC MCAAA+  AR+  +YYGA+
Sbjct: 72  GEILLPRAQVATTCEPCPMCAAALHWARVAEIYYGAT 108


>gi|290959146|ref|YP_003490328.1| deaminase [Streptomyces scabiei 87.22]
 gi|260648672|emb|CBG71785.1| putative deaminase [Streptomyces scabiei 87.22]
          Length = 183

 Score = 73.6 bits (179), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 50/160 (31%), Positives = 74/160 (46%), Gaps = 19/160 (11%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNN--KIISRAGNRNRELKDVTAHAEIL-------- 57
           M  AL EA  AA   ++PVGAV +  +   +++   N      D TAHAE+L        
Sbjct: 24  MRLALAEAGRAAEGGDVPVGAVVLSPDGTTVLATGHNEREATGDPTAHAEVLALRRAAAA 83

Query: 58  ---------AIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGG 108
                    +   G R   +  L +  L VTLEPCTMCA A+  +RI R+ YGA + K G
Sbjct: 84  LRATGARGSSAEEGGRRTGEWRLTDCTLVVTLEPCTMCAGALVQSRIDRVVYGARDEKAG 143

Query: 109 GIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKER 148
              +          +H PE+  G+      +++ +FF+ R
Sbjct: 144 ATGSLWDVVRDRRLNHRPEVVEGVLADDCARLLTEFFRTR 183


>gi|319901465|ref|YP_004161193.1| CMP/dCMP deaminase zinc-binding protein [Bacteroides helcogenes P
           36-108]
 gi|319416496|gb|ADV43607.1| CMP/dCMP deaminase zinc-binding protein [Bacteroides helcogenes P
           36-108]
          Length = 156

 Score = 73.6 bits (179), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 39/97 (40%), Positives = 54/97 (55%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  A++ A +   R   P GAV V + KI+ +  N      D TAHAE++AIR  C+ L
Sbjct: 7   FMETAIQLALDNINRGGGPFGAVIVKDGKIVGQGCNSVTNHLDPTAHAEVMAIRNTCQAL 66

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
              IL   ++Y + EPC MC +AI  A I R+YY  +
Sbjct: 67  DTFILEGCEIYSSCEPCPMCLSAIYWAHIDRIYYACT 103


>gi|229179327|ref|ZP_04306681.1| Cytosine deaminase [Bacillus cereus 172560W]
 gi|228604225|gb|EEK61692.1| Cytosine deaminase [Bacillus cereus 172560W]
          Length = 158

 Score = 73.6 bits (179), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 47/102 (46%), Positives = 60/102 (58%), Gaps = 3/102 (2%)

Query: 11  ALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIR-MGCRILSQ 68
           ALEEA+ A   N  PVGAV V  NN +I+R  NR    KD+TAHAEI AIR  G  +   
Sbjct: 2   ALEEAEMALKENTYPVGAVIVDGNNNVIARGRNRVHPQKDITAHAEIDAIRNAGEAMFDA 61

Query: 69  EILPE-VDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109
           +I  E   +Y TLEPC MC   I  A+I+R+ +  ++  G G
Sbjct: 62  KIKNEKFTIYSTLEPCPMCTGGILFAKIQRVVWLLNDDLGFG 103


>gi|270284659|ref|ZP_05966459.2| cytidine/deoxycytidylate deaminase family protein [Bifidobacterium
           gallicum DSM 20093]
 gi|270276606|gb|EFA22460.1| cytidine/deoxycytidylate deaminase family protein [Bifidobacterium
           gallicum DSM 20093]
          Length = 170

 Score = 73.6 bits (179), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 46/142 (32%), Positives = 65/142 (45%), Gaps = 1/142 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  A+ +A  A    ++P+GA  +    ++I R  N      D  AHAEI A+R     L
Sbjct: 28  MESAIAQALQAKQHGDVPIGACVLDAGGRVIGRGHNMRERNLDPLAHAEIEAMREAAATL 87

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  L VTLEPC MCA A     + R+ +GA + K G   +             P
Sbjct: 88  GSWNLEDCTLVVTLEPCPMCAGACLQTHVGRIVFGAWDAKLGACGSVWDLPRDPHIGAHP 147

Query: 127 EIYPGISEQRSRQIIQDFFKER 148
           E+Y GI E    Q++  FF+ R
Sbjct: 148 EVYGGIRESECAQLLTAFFRLR 169


>gi|255972217|ref|ZP_05422803.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis T1]
 gi|255963235|gb|EET95711.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis T1]
          Length = 102

 Score = 73.6 bits (179), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 39/87 (44%), Positives = 52/87 (59%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  A+ EA+ A    E+P+GAV V   +II R  N     ++ TAHAE+ AI+  CR +
Sbjct: 16  FMREAIAEAKKAEGLAEVPIGAVIVRQGEIIGRGHNLREARQEATAHAEMYAIQEACRGI 75

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLA 93
               L E  L+VTLEPC MC+ A+ LA
Sbjct: 76  ENWRLEETQLFVTLEPCPMCSGAMLLA 102


>gi|226310134|ref|YP_002770028.1| guanine deaminase [Brevibacillus brevis NBRC 100599]
 gi|226093082|dbj|BAH41524.1| guanine deaminase [Brevibacillus brevis NBRC 100599]
          Length = 156

 Score = 73.6 bits (179), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 37/92 (40%), Positives = 47/92 (51%)

Query: 25  PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84
           P GA+ V + +++ R  N      D TAHAEI AIR  CR L    L + DLY + EPC 
Sbjct: 25  PFGALVVKDGQVVGRGRNEVTTSNDPTAHAEIQAIREACRHLETFQLNDCDLYTSCEPCP 84

Query: 85  MCAAAISLARIRRLYYGASNPKGGGIENGTQF 116
           MC  AI  AR R +YY  +      +    QF
Sbjct: 85  MCLGAIYWARPRNVYYACTKEDAAHVGFDDQF 116


>gi|320335249|ref|YP_004171960.1| Guanine deaminase [Deinococcus maricopensis DSM 21211]
 gi|319756538|gb|ADV68295.1| Guanine deaminase [Deinococcus maricopensis DSM 21211]
          Length = 155

 Score = 73.6 bits (179), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 42/113 (37%), Positives = 58/113 (51%), Gaps = 5/113 (4%)

Query: 9   SCALEEAQNAALRNEI-----PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
           S  ++EA   AL N       P GAV V + +II+R  N      D TAHAE+ AIR   
Sbjct: 3   STHMQEAARLALENVTSGHGGPFGAVIVKDGEIIARGANNVTASNDPTAHAEVTAIRAAA 62

Query: 64  RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116
             L +  L + ++Y + EPC MC  AI  AR++R++YG +      I    QF
Sbjct: 63  AKLGRFDLSDCEIYTSCEPCPMCLGAIYWARLQRVHYGCTQADADAIGFSDQF 115


>gi|26388773|dbj|BAB32363.2| unnamed protein product [Mus musculus]
          Length = 191

 Score = 73.6 bits (179), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 47/149 (31%), Positives = 75/149 (50%), Gaps = 12/149 (8%)

Query: 12  LEEAQ---NAALRN-EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           +EEA    N AL N E+PVG + V NN+++ +  N   + K+ T HAE++AI        
Sbjct: 26  MEEATRMANEALENIEVPVGCLMVYNNEVVGKGTNEVNQTKNATRHAEMVAIDQVLDWCH 85

Query: 68  QE------ILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT--L 119
           Q       +     LYVT+EPC MCAAA+ L +I  + YG  N + GG  +     +  L
Sbjct: 86  QHGQSPSTVFEHTVLYVTVEPCIMCAAALRLMKIPLVVYGCQNERFGGCGSVLNIASADL 145

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKER 148
                  +  PG   + + ++++ F+K+ 
Sbjct: 146 PNTGRPFQCIPGYRAEEAVELLKTFYKQE 174


>gi|297563744|ref|YP_003682718.1| CMP/dCMP deaminase zinc-binding protein [Nocardiopsis dassonvillei
           subsp. dassonvillei DSM 43111]
 gi|296848192|gb|ADH70212.1| CMP/dCMP deaminase zinc-binding protein [Nocardiopsis dassonvillei
           subsp. dassonvillei DSM 43111]
          Length = 160

 Score = 73.2 bits (178), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 52/151 (34%), Positives = 72/151 (47%), Gaps = 6/151 (3%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELK-DVTAHAEILAIRMGC 63
           +  +  A+ E + A    ++PVGAV +  +  +   G   RE   D TAHAE+LA+R   
Sbjct: 8   DAALRAAIAEGEAALETGDVPVGAVVLDADGAVLGTGRNEREATGDPTAHAEVLALRAAA 67

Query: 64  RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123
           R   +  L    L VTLEPCTMCA A  L+R+ RL YGA + K G   +          +
Sbjct: 68  RARGEWRLGGCTLVVTLEPCTMCAGATVLSRVDRLVYGARDAKAGAAGSVWDAVRDPRLN 127

Query: 124 HSPEIYPGI-----SEQRSRQIIQDFFKERR 149
           H PE+ P          R   ++  FF  RR
Sbjct: 128 HRPEVVPPDLVPRELSDRCSDLLSRFFARRR 158


>gi|254520799|ref|ZP_05132855.1| CMP/dCMP deaminase [Clostridium sp. 7_2_43FAA]
 gi|226914548|gb|EEH99749.1| CMP/dCMP deaminase [Clostridium sp. 7_2_43FAA]
          Length = 147

 Score = 73.2 bits (178), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 52/142 (36%), Positives = 77/142 (54%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  A+ EA+NA    E+PVG V V + ++I+   N   +LK  TAHAEILAI   C+ L
Sbjct: 3   YMDLAINEAKNAYNIGEVPVGVVVVKDGEVIASQHNLKEKLKLTTAHAEILAIEEACKKL 62

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
           +   L   ++YVTLEPC MCAAAI+ +RI RL+ G  N   G   +          +   
Sbjct: 63  NNWRLSGCEMYVTLEPCPMCAAAIAQSRISRLFIGTFNKDMGACGSTINLIDYNIFNWHV 122

Query: 127 EIYPGISEQRSRQIIQDFFKER 148
           ++    +++ S  +   F K+R
Sbjct: 123 DVKWCYNQECSDLLTSFFIKQR 144


>gi|330825481|ref|YP_004388784.1| CMP/dCMP deaminase zinc-binding protein [Alicycliphilus
           denitrificans K601]
 gi|329310853|gb|AEB85268.1| CMP/dCMP deaminase zinc-binding protein [Alicycliphilus
           denitrificans K601]
          Length = 358

 Score = 73.2 bits (178), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 45/124 (36%), Positives = 63/124 (50%)

Query: 22  NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81
            E+PVGAV V   ++I+   N      D TAHAEI A+R     L    L    LYVTLE
Sbjct: 25  GEVPVGAVLVRGGEVIATGRNAPIAGHDPTAHAEIAALRAAAARLGNYRLDGCTLYVTLE 84

Query: 82  PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141
           PC MCA A+  AR+ R+ YGA++PK G   +    +     +H   +  G+  +    ++
Sbjct: 85  PCAMCAGAMLHARLPRVVYGAADPKTGAAGSVVDLFAEPRLNHQTRVAGGVLAEECGALL 144

Query: 142 QDFF 145
             FF
Sbjct: 145 SGFF 148


>gi|317969787|ref|ZP_07971177.1| tRNA-specific adenosine deaminase [Synechococcus sp. CB0205]
          Length = 182

 Score = 73.2 bits (178), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 41/146 (28%), Positives = 72/146 (49%), Gaps = 1/146 (0%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNN-KIISRAGNRNRELKDVTAHAEILAIR 60
           ++  ++M   L  A+    + EIPV AV +  + + +    NR +  +    HAE++A+ 
Sbjct: 16  QRHELWMRRLLRRAEAVGEKGEIPVAAVLLDGHGRALGWGVNRRQREQRPLGHAELMALE 75

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              R+       +  L VTLEPC MCA A+  AR+ ++ +GA +PK G +       T  
Sbjct: 76  QAARLRGDWRFNDCSLIVTLEPCPMCAGALVQARMGQVIFGAHDPKRGALGGCLNLATDP 135

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFK 146
           + HH   +  G+ E   +  ++ +FK
Sbjct: 136 SAHHHMTVMGGVLELECKSRLEAWFK 161


>gi|319763286|ref|YP_004127223.1| cmp/dcmp deaminase zinc-binding protein [Alicycliphilus
           denitrificans BC]
 gi|317117847|gb|ADV00336.1| CMP/dCMP deaminase zinc-binding protein [Alicycliphilus
           denitrificans BC]
          Length = 358

 Score = 73.2 bits (178), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 45/124 (36%), Positives = 63/124 (50%)

Query: 22  NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81
            E+PVGAV V   ++I+   N      D TAHAEI A+R     L    L    LYVTLE
Sbjct: 25  GEVPVGAVLVRGGEVIATGRNAPIAGHDPTAHAEIAALRAAAARLGNYRLDGCTLYVTLE 84

Query: 82  PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141
           PC MCA A+  AR+ R+ YGA++PK G   +    +     +H   +  G+  +    ++
Sbjct: 85  PCAMCAGAMLHARLPRVVYGAADPKTGAAGSVVDLFAEPRLNHQTRVAGGVLAEECGALL 144

Query: 142 QDFF 145
             FF
Sbjct: 145 SGFF 148


>gi|302835481|ref|XP_002949302.1| hypothetical protein VOLCADRAFT_89616 [Volvox carteri f.
           nagariensis]
 gi|300265604|gb|EFJ49795.1| hypothetical protein VOLCADRAFT_89616 [Volvox carteri f.
           nagariensis]
          Length = 192

 Score = 73.2 bits (178), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 39/78 (50%), Positives = 47/78 (60%)

Query: 24  IPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83
           +PVGAV V  ++I++R  NR   L+   AHAE+L I  G   LS   L    LY TLEPC
Sbjct: 58  VPVGAVLVHGDRILARGHNRVHRLRSPVAHAEMLCITAGASKLSSWRLLGATLYATLEPC 117

Query: 84  TMCAAAISLARIRRLYYG 101
            MCA AI  ARI R+ YG
Sbjct: 118 PMCAGAILQARIARVVYG 135


>gi|229046739|ref|ZP_04192382.1| Cytosine deaminase [Bacillus cereus AH676]
 gi|229110499|ref|ZP_04240069.1| Cytosine deaminase [Bacillus cereus Rock1-15]
 gi|229128373|ref|ZP_04257354.1| Cytosine deaminase [Bacillus cereus BDRD-Cer4]
 gi|228655232|gb|EEL11089.1| Cytosine deaminase [Bacillus cereus BDRD-Cer4]
 gi|228672983|gb|EEL28257.1| Cytosine deaminase [Bacillus cereus Rock1-15]
 gi|228724557|gb|EEL75871.1| Cytosine deaminase [Bacillus cereus AH676]
          Length = 158

 Score = 73.2 bits (178), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 46/102 (45%), Positives = 60/102 (58%), Gaps = 3/102 (2%)

Query: 11  ALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIR-MGCRILSQ 68
           ALEEA+ A   N  PVGAV V  NN +I+R  NR    KD+TAHAE+ AIR  G  +   
Sbjct: 2   ALEEAEKALKENTYPVGAVIVDGNNNVIARGRNRVHPEKDITAHAELDAIRNAGEAMFDA 61

Query: 69  EILPE-VDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109
           +I  E   +Y TLEPC MC   I  A+I+R+ +  ++  G G
Sbjct: 62  KIKNERFTIYSTLEPCPMCTGGILFAKIQRVVWLLNDDLGFG 103


>gi|156087547|ref|XP_001611180.1| cytosine deaminase [Babesia bovis T2Bo]
 gi|154798434|gb|EDO07612.1| cytosine deaminase, putative [Babesia bovis]
          Length = 191

 Score = 73.2 bits (178), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 50/159 (31%), Positives = 73/159 (45%), Gaps = 26/159 (16%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNK--IISRAGNRNRELKDVTAHAEILAIRMGCR 64
           FM+ AL+EA++A  R E+ VG V V   K  I++RAGN   +  + T H E  AI     
Sbjct: 10  FMTAALDEARDALERGEVAVGCVIVDKEKKTIVARAGNSTNQKHNSTWHCEFGAIDTLFS 69

Query: 65  ILS------------QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG--- 109
           ++             Q       L+VT EPC MCA A+ +  +  +YYG  N K GG   
Sbjct: 70  LVPDGKIGANDQANIQAFTSRYALFVTCEPCIMCATALHIVGLTDIYYGCDNEKFGGCGS 129

Query: 110 ---IENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
              +  G   +    CH       GI  + + Q++Q F+
Sbjct: 130 VLSLHEGYGDFPPLNCHK------GIRAEEAIQLLQTFY 162


>gi|20092219|ref|NP_618294.1| cytidine/deoxycytidylate deaminase family protein [Methanosarcina
           acetivorans C2A]
 gi|19917452|gb|AAM06774.1| cytidine/deoxycytidylate deaminase family protein [Methanosarcina
           acetivorans C2A]
          Length = 162

 Score = 73.2 bits (178), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 43/115 (37%), Positives = 59/115 (51%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           +K  +FM  A+E +  +  +   P GAV   N KIIS + N+   L D TAHAEI AIR 
Sbjct: 8   EKDTLFMRRAIELSLESVKKGGGPFGAVITKNGKIISESCNQVTVLNDPTAHAEISAIRE 67

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116
             R L+   L   ++Y + EPC MC  AI  ARI R+++  +      I     F
Sbjct: 68  AARKLNAPDLKGCEIYASCEPCPMCLGAIYWARIDRVFFANTREDADNIGFDDSF 122


>gi|224283917|ref|ZP_03647239.1| Cytosine/adenosine deaminase [Bifidobacterium bifidum NCIMB 41171]
 gi|313141068|ref|ZP_07803261.1| cytosine/adenosine deaminase [Bifidobacterium bifidum NCIMB 41171]
 gi|313133578|gb|EFR51195.1| cytosine/adenosine deaminase [Bifidobacterium bifidum NCIMB 41171]
          Length = 150

 Score = 73.2 bits (178), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 48/144 (33%), Positives = 69/144 (47%), Gaps = 3/144 (2%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNK--IISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M  A+   + A  + ++PVGAV VL+ +  +I R  NR     D  AHAEI A+R   + 
Sbjct: 8   MCEAIALGERAGKQGDVPVGAV-VLDERGTVIGRGRNRREAGHDPLAHAEIEAMREAAQA 66

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
                L +  L VTLEPC MCA A     I R+ +GA + K G   +           H 
Sbjct: 67  RGDWNLADCTLVVTLEPCPMCAGACIQTHIGRIVFGAWDAKLGACGSIWDIPRDPHVGHV 126

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
           P++  G+ E    +++  FF  RR
Sbjct: 127 PQVVGGVREAACARLLTGFFASRR 150


>gi|116794256|gb|ABK27067.1| unknown [Picea sitchensis]
 gi|116794306|gb|ABK27088.1| unknown [Picea sitchensis]
          Length = 186

 Score = 72.8 bits (177), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 40/97 (41%), Positives = 59/97 (60%), Gaps = 1/97 (1%)

Query: 7   FMSCALEEAQNAA-LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           F+S A+EEA +     +  P GA+ V N+++I+   N   +  D TAHAE+ AIR  C  
Sbjct: 34  FLSKAVEEAYSGVNCGHGGPFGAIVVRNDEVIASCHNMVLKNMDPTAHAEVTAIREACNK 93

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGA 102
           L +  L + +++ + EPC MC  AI L+RI+RL YGA
Sbjct: 94  LGRIELSDCEIFASCEPCPMCFGAIHLSRIKRLLYGA 130


>gi|329938756|ref|ZP_08288152.1| putative deaminase [Streptomyces griseoaurantiacus M045]
 gi|329302247|gb|EGG46139.1| putative deaminase [Streptomyces griseoaurantiacus M045]
          Length = 157

 Score = 72.8 bits (177), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 44/126 (34%), Positives = 66/126 (52%), Gaps = 1/126 (0%)

Query: 22  NEIPVGAVAVLNNKIISRAGNRNRE-LKDVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80
            ++PVGAV +  +      G+  RE   D TAHAE+LA+R       +  L    L VTL
Sbjct: 15  GDVPVGAVVLSADGTPLATGHNEREATGDPTAHAEVLALRRAAAATGEWRLSGCTLVVTL 74

Query: 81  EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140
           EPCTMCA A+  +R+ R+ YGA + K G   +          +H PE+  G+  +   ++
Sbjct: 75  EPCTMCAGALQQSRVDRVVYGARDDKAGAAGSLWDLLRDRRLNHRPEVIEGVLAEDCARL 134

Query: 141 IQDFFK 146
           + DFF+
Sbjct: 135 LTDFFR 140


>gi|325838575|ref|ZP_08166576.1| guanine deaminase [Turicibacter sp. HGF1]
 gi|325490801|gb|EGC93104.1| guanine deaminase [Turicibacter sp. HGF1]
          Length = 154

 Score = 72.8 bits (177), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 42/111 (37%), Positives = 62/111 (55%), Gaps = 1/111 (0%)

Query: 7   FMSCALEEAQNAA-LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           +M  A+EEA+N    ++  P GAV V +N++I++A N   +  D T HAEI AIR+  R 
Sbjct: 4   YMKMAIEEAENGVKCKHGGPFGAVIVKDNQVIAKAHNTVVKENDPTCHAEINAIRLASRT 63

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116
           L+   L +  L+ + EPC MC +AI  A I  +YYG +      I    +F
Sbjct: 64  LNTFKLNDCLLFTSSEPCPMCLSAILWAGIETVYYGCTVEDANKIGFADEF 114


>gi|189204912|ref|XP_001938791.1| tRNA-specific adenosine deaminase subunit TAD2 [Pyrenophora
           tritici-repentis Pt-1C-BFP]
 gi|187985890|gb|EDU51378.1| tRNA-specific adenosine deaminase subunit TAD2 [Pyrenophora
           tritici-repentis Pt-1C-BFP]
          Length = 234

 Score = 72.8 bits (177), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 48/142 (33%), Positives = 72/142 (50%), Gaps = 6/142 (4%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  A+  A+ A   +E PVG V V + +II R  N      + T HAE +AI     IL
Sbjct: 12  FMREAIAMAELALKSDETPVGCVFVKDGEIIGRGMNETNRTLNGTRHAEFVAI---AGIL 68

Query: 67  SQE---ILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123
           S+    IL E DLYVT+EPC MCA+ +    IR +Y+G  N + GG       ++  +  
Sbjct: 69  SKHPISILNETDLYVTVEPCVMCASMLRQYGIRAVYFGCWNERFGGTGGVLNIHSDPSVD 128

Query: 124 HSPEIYPGISEQRSRQIIQDFF 145
               +  GI  + +  +++ F+
Sbjct: 129 KPYPVTGGIFREEAIMLLRKFY 150


>gi|50742655|ref|XP_419709.1| PREDICTED: similar to DEADC1 protein [Gallus gallus]
          Length = 172

 Score = 72.8 bits (177), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 43/115 (37%), Positives = 58/115 (50%), Gaps = 6/115 (5%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M+    +M  A   AQ A    E+PVG + V +   I +  N   E K+ T HAE++AI 
Sbjct: 1   MEDEAAWMERAFSMAQEALEAGEVPVGCLLVYDGAAIGKGRNEVNETKNATRHAEMVAID 60

Query: 61  MGCRILSQ------EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109
                  Q      E+     LYVT+EPC MCAAA+ L +I R+ YG  N + GG
Sbjct: 61  QVLEWCQQHKKDHEEVFSHSVLYVTVEPCIMCAAALRLMKIPRVVYGCRNERFGG 115


>gi|328771384|gb|EGF81424.1| hypothetical protein BATDEDRAFT_87367 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 182

 Score = 72.8 bits (177), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 45/113 (39%), Positives = 63/113 (55%), Gaps = 10/113 (8%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNK-IISRAGNRNRELKDVTAHAEILAIR--MGC 63
           +M+ AL+ A +A    E+PVG V V  +K II +  NR  E  +   HAE  AI   M  
Sbjct: 12  YMTMALQLASDAYDVGEVPVGCVFVHASKGIIGQGRNRTNESLNGVRHAEFEAIDQIMSM 71

Query: 64  RILSQEI-------LPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109
           R L  ++        P+ D+YVT+EPC MCA+A+   +IRR+ +G  N K GG
Sbjct: 72  RPLETDLDTYVKTTFPQTDVYVTVEPCIMCASALRHLQIRRVVFGCGNDKFGG 124


>gi|42521730|ref|NP_967110.1| cytidine/deoxycytidylate deaminase family protein [Bdellovibrio
           bacteriovorus HD100]
 gi|39574260|emb|CAE77764.1| cytidine/deoxycytidylate deaminase family protein [Bdellovibrio
           bacteriovorus HD100]
          Length = 155

 Score = 72.8 bits (177), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 37/92 (40%), Positives = 48/92 (52%)

Query: 25  PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84
           P GAV V + KII    N+     D TAHAE+ AIR  C  +S   L   ++Y + EPC 
Sbjct: 24  PFGAVIVKDGKIIGEGWNKVTSSNDPTAHAEVSAIRDACSKISNFELAGAEIYTSCEPCP 83

Query: 85  MCAAAISLARIRRLYYGASNPKGGGIENGTQF 116
           MC +AI  ARI ++YYG +      I     F
Sbjct: 84  MCLSAIYWARIEKIYYGNTRKDAAEINFDDDF 115


>gi|194398441|ref|YP_002036741.1| cytosine/adenosine deaminase [Streptococcus pneumoniae G54]
 gi|194358108|gb|ACF56556.1| Cytosine/adenosine deaminase [Streptococcus pneumoniae G54]
          Length = 106

 Score = 72.8 bits (177), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 44/97 (45%), Positives = 59/97 (60%), Gaps = 4/97 (4%)

Query: 1  MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
          +++  VFM  AL EA+ A   +EIP+G V V + +II R  N   EL+    HAEI+AI 
Sbjct: 5  LEEKEVFMREALREAEIALEHDEIPIGCVIVKDGEIIGRGHNAREELQRAVMHAEIMAIE 64

Query: 61 MGCRILSQEILPEVD--LYVTLEPCTMCAAAISLARI 95
               LS+E    +D  L+VT+EPC MC+ AI LARI
Sbjct: 65 DA--NLSEESWRLLDCTLFVTIEPCVMCSGAIGLARI 99


>gi|293608518|ref|ZP_06690821.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|292829091|gb|EFF87453.1| conserved hypothetical protein [Acinetobacter sp. SH024]
          Length = 161

 Score = 72.8 bits (177), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 50/138 (36%), Positives = 70/138 (50%), Gaps = 7/138 (5%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M+KG  F+  A+E A     +   P GAV V N +II+   N+     D TAHAE+LAIR
Sbjct: 2   MEKGEQFLRKAIELAYKNIEKGGRPFGAVVVKNGEIIASGVNQILVTNDPTAHAELLAIR 61

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              ++L    L    +Y +  PC MC AA+ LA I+ + Y  SN      E+GT F  L+
Sbjct: 62  AASQVLGSANLEGCSVYASGHPCPMCMAAMRLAGIKSVSYAYSN------EDGTPF-GLS 114

Query: 121 TCHHSPEIYPGISEQRSR 138
           T     E+    +EQ  +
Sbjct: 115 TAEIYIELAKPFAEQSMK 132


>gi|293375825|ref|ZP_06622095.1| putative guanine deaminase [Turicibacter sanguinis PC909]
 gi|292645602|gb|EFF63642.1| putative guanine deaminase [Turicibacter sanguinis PC909]
          Length = 154

 Score = 72.8 bits (177), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 42/111 (37%), Positives = 62/111 (55%), Gaps = 1/111 (0%)

Query: 7   FMSCALEEAQNAA-LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           +M  A+EEA+N    ++  P GAV V +N++I++A N   +  D T HAEI AIR+  R 
Sbjct: 4   YMKMAIEEAENGVKCKHGGPFGAVIVKDNQVIAKAHNTVVKENDPTCHAEINAIRLASRT 63

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116
           L+   L +  L+ + EPC MC +AI  A I  +YYG +      I    +F
Sbjct: 64  LNTFKLNDCLLFTSSEPCPMCLSAILWAGIETVYYGCTVEDANKIGFADEF 114


>gi|168002130|ref|XP_001753767.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162695174|gb|EDQ81519.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 191

 Score = 72.8 bits (177), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 43/98 (43%), Positives = 63/98 (64%), Gaps = 3/98 (3%)

Query: 7   FMSCALEEAQNAALRNEI--PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           F++ A +EA + A+R E   P GAV V + +I+++A N   + KD TAHAEI+AI+  C+
Sbjct: 41  FLTVAAKEA-DMAMRKEEGGPFGAVIVRDGEIVAQAHNEVLKQKDPTAHAEIVAIQKACK 99

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGA 102
            L +  L +  +Y + EPC M  AA+ LAR+ RL YGA
Sbjct: 100 KLGKIELSDCVIYSSCEPCPMSFAAMYLARLPRLVYGA 137


>gi|163787392|ref|ZP_02181839.1| cytidine/deoxycytidylate deaminase family protein [Flavobacteriales
           bacterium ALC-1]
 gi|159877280|gb|EDP71337.1| cytidine/deoxycytidylate deaminase family protein [Flavobacteriales
           bacterium ALC-1]
          Length = 159

 Score = 72.8 bits (177), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 42/108 (38%), Positives = 56/108 (51%), Gaps = 5/108 (4%)

Query: 14  EAQNAALR----NEI-PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQ 68
           EA NAAL+    NE  P G V V + +I+ R  N+     D TAHAE+ AIR  C+ L  
Sbjct: 12  EAVNAALKGMNNNEGGPFGCVVVKDGEIVGRGNNKVTSTNDPTAHAEVTAIRDACKNLDS 71

Query: 69  EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116
             L    +Y + EPC MC  AI  AR  ++YYG++      I    +F
Sbjct: 72  FQLEGCQIYTSCEPCPMCLGAIYWARPDKVYYGSNQVDAANIGFDDEF 119


>gi|325283258|ref|YP_004255799.1| tRNA(Ile)-lysidine synthase [Deinococcus proteolyticus MRP]
 gi|324315067|gb|ADY26182.1| tRNA(Ile)-lysidine synthase [Deinococcus proteolyticus MRP]
          Length = 529

 Score = 72.8 bits (177), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 40/90 (44%), Positives = 53/90 (58%), Gaps = 3/90 (3%)

Query: 23  EIPVGAVAVLN--NKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80
           E+PVGA AVL+    ++    NR+RE  D+T HAE+ A+R     L    L    L VTL
Sbjct: 400 EVPVGA-AVLDPAGAVVGLGRNRSRERGDMTRHAELEALRQAASALGTPYLSGCTLAVTL 458

Query: 81  EPCTMCAAAISLARIRRLYYGASNPKGGGI 110
           EPC MC  A   AR+ R+ YGA+NP+ G +
Sbjct: 459 EPCPMCLGAALEARVGRIVYGAANPRAGAL 488


>gi|317051257|ref|YP_004112373.1| CMP/dCMP deaminase zinc-binding protein [Desulfurispirillum indicum
           S5]
 gi|316946341|gb|ADU65817.1| CMP/dCMP deaminase zinc-binding protein [Desulfurispirillum indicum
           S5]
          Length = 157

 Score = 72.8 bits (177), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 43/117 (36%), Positives = 58/117 (49%), Gaps = 1/117 (0%)

Query: 1   MKKGNVFMSCALEEA-QNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
           M    V+M  A+  A QN    +  P GAV V   +++ R  N      D TAHAEI+AI
Sbjct: 1   MSDHRVYMEQAIAMARQNIDSGDGGPFGAVIVREGQVVGRGRNGVTSSLDPTAHAEIVAI 60

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116
           R  C  L    L + D+Y + EPC MC  AI  AR+R +YY A+      +    +F
Sbjct: 61  RDACANLKTFHLEDCDIYTSCEPCPMCLGAIYWARLRAIYYAANRQDAARVNFSDEF 117


>gi|149744219|ref|XP_001497309.1| PREDICTED: similar to deaminase domain containing 1 [Equus
           caballus]
          Length = 186

 Score = 72.8 bits (177), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 45/138 (32%), Positives = 73/138 (52%), Gaps = 9/138 (6%)

Query: 19  ALRN-EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG---CRILSQ---EIL 71
           AL N E+PVG + V NN+++ +  N   + K+ T HAE++AI      CR   +   E+ 
Sbjct: 31  ALENIEVPVGCLMVYNNEVVGKGRNEVNQTKNATRHAEMVAIDQALAWCRGRGRCPAEVF 90

Query: 72  PEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT--LATCHHSPEIY 129
               LYVT+EPC MCAAA+ L +I  + YG  N + GG  +     +  L       +  
Sbjct: 91  ERAVLYVTVEPCVMCAAALRLMKIPLVVYGCQNERFGGCGSVLNIASADLPNTGRPFQCV 150

Query: 130 PGISEQRSRQIIQDFFKE 147
           PG   + + ++++ F+K+
Sbjct: 151 PGYRAEEAVEMLKTFYKQ 168


>gi|227506029|ref|ZP_03936078.1| nucleoside deaminase [Corynebacterium striatum ATCC 6940]
 gi|227197311|gb|EEI77359.1| nucleoside deaminase [Corynebacterium striatum ATCC 6940]
          Length = 156

 Score = 72.8 bits (177), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 51/138 (36%), Positives = 66/138 (47%), Gaps = 18/138 (13%)

Query: 22  NEIPVGAV---AVLNNKIISRAGNRNRELKDVTAHAEILAIRM-------GCRILSQEIL 71
            +IPVGAV   A  N   +S   NR  +  D TAHAE+ AIR        G R+   EI+
Sbjct: 27  GDIPVGAVLYDAAGNE--LSTGVNRREQRGDPTAHAEVEAIRAAVAKHGNGWRLEGCEIV 84

Query: 72  PEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPG 131
                 VTLEPC MCA AI  AR+  + +GA  PK G   +           H PE+  G
Sbjct: 85  ------VTLEPCAMCAGAIQGARVASVVFGAFEPKTGACGSLVDVLRAPGSLHVPEVRAG 138

Query: 132 ISEQRSRQIIQDFFKERR 149
           + E+    ++  FF E R
Sbjct: 139 VCEEECAGLLTGFFGELR 156


>gi|302544137|ref|ZP_07296479.1| cytidine and deoxycytidylate deaminase [Streptomyces hygroscopicus
           ATCC 53653]
 gi|302461755|gb|EFL24848.1| cytidine and deoxycytidylate deaminase [Streptomyces himastatinicus
           ATCC 53653]
          Length = 166

 Score = 72.4 bits (176), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 51/140 (36%), Positives = 70/140 (50%), Gaps = 1/140 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  ALEEA  A    ++PVGAV +  +  ++ R  N      D TAHAE+LA+R   R L
Sbjct: 25  MRLALEEAVRAPETGDVPVGAVVLGPDGTVLGRGRNEREAHGDPTAHAEVLALRAAARRL 84

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L    L VTLEPC MCA AI L+R+ R+ YGA + K G + +          +H P
Sbjct: 85  GGWRLTGCTLVVTLEPCAMCAGAIVLSRLDRVVYGAIDEKAGAVGSLWDIVRDRRLNHRP 144

Query: 127 EIYPGISEQRSRQIIQDFFK 146
           E+   +        +  FF+
Sbjct: 145 EVIHDVLPDECAAPLTAFFR 164


>gi|169599362|ref|XP_001793104.1| hypothetical protein SNOG_02499 [Phaeosphaeria nodorum SN15]
 gi|111069591|gb|EAT90711.1| hypothetical protein SNOG_02499 [Phaeosphaeria nodorum SN15]
          Length = 265

 Score = 72.4 bits (176), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 53/148 (35%), Positives = 75/148 (50%), Gaps = 18/148 (12%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  A+  A+ A   +E PVG V V + +II R  N      + T HAE +AI     IL
Sbjct: 73  FMREAIAMAELALKSDETPVGCVFVKDGEIIGRGMNETNRTLNGTRHAEFVAI---AGIL 129

Query: 67  SQ---EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123
           S+   +IL E DLYVT+EPC MCA+ +    IR +Y+G  N + GG         +   H
Sbjct: 130 SKSPVKILNETDLYVTVEPCVMCASMLRQYGIRAVYFGCWNERFGGTGG------VLNIH 183

Query: 124 HSPEI---YP---GISEQRSRQIIQDFF 145
             P I   YP   GI  + +  +++ F+
Sbjct: 184 SDPSIDKPYPVTGGIFREEAIMLLRKFY 211


>gi|150398810|ref|YP_001322577.1| CMP/dCMP deaminase zinc-binding [Methanococcus vannielii SB]
 gi|150011513|gb|ABR53965.1| CMP/dCMP deaminase zinc-binding [Methanococcus vannielii SB]
          Length = 146

 Score = 72.4 bits (176), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 44/117 (37%), Positives = 62/117 (52%), Gaps = 5/117 (4%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  A++EA+  A+   IP+GAV V  NK+I R  N+  +   V  HAE+ A+    RI 
Sbjct: 4   FMEEAIKEAKLGAIEGGIPIGAVLVYKNKVIGRGHNKRIQKNSVVFHAEMDALENAGRIN 63

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIE----NGTQFYTL 119
           S  I  + +LY TL PC MC+ AI L  I+++  G +    G  E    NG +   L
Sbjct: 64  SS-IYKDCELYTTLSPCIMCSGAILLYNIKKVIIGENKTFKGAEELLEKNGVKLEVL 119


>gi|332666596|ref|YP_004449384.1| CMP/dCMP deaminase zinc-binding protein [Haliscomenobacter
           hydrossis DSM 1100]
 gi|332335410|gb|AEE52511.1| CMP/dCMP deaminase zinc-binding protein [Haliscomenobacter
           hydrossis DSM 1100]
          Length = 137

 Score = 72.4 bits (176), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 50/129 (38%), Positives = 64/129 (49%), Gaps = 4/129 (3%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           F+ C    A +A L N  PVGAV + +  II+      R   DVT HAEI AIR    IL
Sbjct: 10  FLRCHELAATSAELGNP-PVGAVLIRDGLIIAEGLELARSSGDVTRHAEIEAIRAAVHIL 68

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS- 125
               L + +L  T EPC MCA AI   RIRR+ Y  + P  GG+ +     +  T   + 
Sbjct: 69  KTSDLSDCELITTHEPCVMCAYAIRHYRIRRVVYELAVPTVGGVSSKFPVLSDPTFWEAR 128

Query: 126 --PEIYPGI 132
             PEI+ G 
Sbjct: 129 PVPEIHLGF 137


>gi|86143339|ref|ZP_01061741.1| guanine deaminase [Leeuwenhoekiella blandensis MED217]
 gi|85830244|gb|EAQ48704.1| guanine deaminase [Leeuwenhoekiella blandensis MED217]
          Length = 156

 Score = 72.4 bits (176), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 43/110 (39%), Positives = 56/110 (50%), Gaps = 5/110 (4%)

Query: 12  LEEAQNAALR----NEI-PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           ++EA  AAL+    NE  P G V V + KII +  N+     D TAHAE+ AIR  C+ L
Sbjct: 7   MQEAVTAALKGMQNNEGGPFGCVIVKDGKIIGKGNNKVTSTNDPTAHAEVTAIRDACKNL 66

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116
               L    LY + EPC MC  AI  AR  ++YYG++      I     F
Sbjct: 67  GSFQLEGCILYTSCEPCPMCLGAIYWARPEKVYYGSTKTDAAHIGFDDDF 116


>gi|330817316|ref|YP_004361021.1| CMP/dCMP deaminase, zinc-binding protein [Burkholderia gladioli
           BSR3]
 gi|327369709|gb|AEA61065.1| CMP/dCMP deaminase, zinc-binding protein [Burkholderia gladioli
           BSR3]
          Length = 217

 Score = 72.4 bits (176), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 46/124 (37%), Positives = 66/124 (53%)

Query: 22  NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81
            E+PVGAV V  +++I+R  N      D +AHAE+ A+R   + L    LP  +LYVTLE
Sbjct: 52  GEVPVGAVIVRGDEVIARGFNHPIGGHDPSAHAEMAALRAAAQALGNYRLPGCELYVTLE 111

Query: 82  PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141
           PC MC+ AI  ARI R+ YGA +PK G        +     +H   +  G+  +     +
Sbjct: 112 PCLMCSGAIMHARIARVVYGAPDPKTGACGGVVDAFANPQLNHHTSVTGGVLAEECGDAL 171

Query: 142 QDFF 145
           + FF
Sbjct: 172 RSFF 175


>gi|307151761|ref|YP_003887145.1| Guanine deaminase [Cyanothece sp. PCC 7822]
 gi|306981989|gb|ADN13870.1| Guanine deaminase [Cyanothece sp. PCC 7822]
          Length = 158

 Score = 72.4 bits (176), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 36/92 (39%), Positives = 50/92 (54%)

Query: 25  PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84
           P GAV V  +KII++  N+     D TAHAE++AIR  C++L    L   +LY + EPC 
Sbjct: 27  PFGAVIVKEHKIIAKGYNQVTSTNDPTAHAEVVAIRQACQLLQTFELKGCELYTSCEPCP 86

Query: 85  MCAAAISLARIRRLYYGASNPKGGGIENGTQF 116
           MC AAI  A + ++YY  +      I     F
Sbjct: 87  MCLAAIYWASVDKVYYANTKVDAAQIGFDDNF 118


>gi|299139283|ref|ZP_07032459.1| Guanine deaminase [Acidobacterium sp. MP5ACTX8]
 gi|298598963|gb|EFI55125.1| Guanine deaminase [Acidobacterium sp. MP5ACTX8]
          Length = 157

 Score = 72.4 bits (176), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 35/79 (44%), Positives = 45/79 (56%)

Query: 25  PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84
           P GAV V + K+I+   N+     D TAHAE+ AIR  C  L    L   D+Y + EPC 
Sbjct: 26  PFGAVVVKDGKVIATGANQVTATNDPTAHAEVTAIRNACTALGHFQLDGCDVYSSCEPCP 85

Query: 85  MCAAAISLARIRRLYYGAS 103
           MC AA+  +R R +YYG S
Sbjct: 86  MCLAALYWSRCRAIYYGNS 104


>gi|297570087|ref|YP_003691431.1| CMP/dCMP deaminase zinc-binding protein [Desulfurivibrio
           alkaliphilus AHT2]
 gi|296926002|gb|ADH86812.1| CMP/dCMP deaminase zinc-binding protein [Desulfurivibrio
           alkaliphilus AHT2]
          Length = 173

 Score = 72.4 bits (176), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 51/154 (33%), Positives = 78/154 (50%), Gaps = 14/154 (9%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTA--HAEILAI 59
           ++ + FM  ALE+A+ A    E PVGAV V   ++++    +N      T   HAEI+A+
Sbjct: 5   EQHHYFMGLALEQARVALQAGEFPVGAVIVAGGRVVAEGNRQNSGGTAPTELDHAEIVAL 64

Query: 60  RMGCRILSQEILPEVD-----LYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           R    +L+++  PE++     LY T+EPC MC A + L  +RR+ Y   +  GGG     
Sbjct: 65  R---GLLARQ--PEIERGGLTLYATMEPCLMCYATLLLNGVRRIVYAYEDAMGGGTSLPL 119

Query: 115 QFYTLATCHHSP--EIYPGISEQRSRQIIQDFFK 146
                     +P  EI P I  + S  + QDFF+
Sbjct: 120 TELNPLYREMAPAVEITPHIRRRESLALFQDFFR 153


>gi|186476063|ref|YP_001857533.1| CMP/dCMP deaminase zinc-binding [Burkholderia phymatum STM815]
 gi|184192522|gb|ACC70487.1| CMP/dCMP deaminase zinc-binding [Burkholderia phymatum STM815]
          Length = 213

 Score = 72.4 bits (176), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 46/122 (37%), Positives = 66/122 (54%)

Query: 24  IPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83
           +PVGAV V  +++I++  N      D +AHAE+ A+R     L    LP  +LYVTLEPC
Sbjct: 61  VPVGAVLVRGDEVIAKGFNHPIGGHDPSAHAEMAALRAAALTLENYRLPGCELYVTLEPC 120

Query: 84  TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQD 143
            MCA AI  ARI R+ YGA +PK G   +    +     +H   +  G+ E+     ++ 
Sbjct: 121 LMCAGAIMHARIARVVYGARDPKTGACGSVVDAFANTQLNHHTTVTGGVLEEECAAALRA 180

Query: 144 FF 145
           FF
Sbjct: 181 FF 182


>gi|71003327|ref|XP_756344.1| hypothetical protein UM00197.1 [Ustilago maydis 521]
 gi|46096349|gb|EAK81582.1| hypothetical protein UM00197.1 [Ustilago maydis 521]
          Length = 1260

 Score = 72.4 bits (176), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 48/124 (38%), Positives = 64/124 (51%), Gaps = 18/124 (14%)

Query: 7    FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
            +M  AL  AQ A   NE+PVG V V   ++I+R  NR  EL + T HAE+ AI     ++
Sbjct: 937  WMREALVMAQEALDANEVPVGGVFVRKGEVIARGRNRTNELMNATRHAELEAIDHILSVM 996

Query: 67   ---------SQEILPEVD-------LYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI 110
                     +    PE D       LYVT+EPC MC AA+    I R+ +GA N + GG 
Sbjct: 997  PPSAPDFAVAPHSGPEGDNPFKDTTLYVTIEPCIMCGAALRQIGIGRVVFGAGNERFGG- 1055

Query: 111  ENGT 114
             NG+
Sbjct: 1056 -NGS 1058


>gi|79361008|ref|NP_564523.3| emb2191 (embryo defective 2191); catalytic/ hydrolase/ zinc ion
           binding [Arabidopsis thaliana]
 gi|48310033|gb|AAT41740.1| At1g48175 [Arabidopsis thaliana]
 gi|50198832|gb|AAT70448.1| At1g48175 [Arabidopsis thaliana]
 gi|332194138|gb|AEE32259.1| Cytidine/deoxycytidylate deaminase family protein [Arabidopsis
           thaliana]
          Length = 182

 Score = 72.4 bits (176), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 43/115 (37%), Positives = 62/115 (53%), Gaps = 15/115 (13%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  AL +A+ A    E+PVG V + + K+I+   NR  E ++ T HAE+ AI    +++
Sbjct: 12  YMGFALHQAKLALEALEVPVGCVFLEDGKVIASGRNRTNETRNATRHAEMEAID---QLV 68

Query: 67  SQ------------EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109
            Q            E   +  LYVT EPC MCA+A+S   I+ +YYG  N K GG
Sbjct: 69  GQWQKDGLSPSQVAEKFSKCVLYVTCEPCIMCASALSFLGIKEVYYGCPNDKFGG 123


>gi|159471219|ref|XP_001693754.1| predicted protein [Chlamydomonas reinhardtii]
 gi|158283257|gb|EDP09008.1| predicted protein [Chlamydomonas reinhardtii]
          Length = 143

 Score = 72.4 bits (176), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 43/129 (33%), Positives = 63/129 (48%), Gaps = 2/129 (1%)

Query: 22  NEIPVGAVAVLNN--KIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVT 79
           +E+PVGAV V  +   +++   NR   L+   AHAE+L +  G        L    LYVT
Sbjct: 15  DEVPVGAVLVAADGATVLAAGHNRVHRLRSPLAHAEMLCLAAGAARSRAWRLLGTTLYVT 74

Query: 80  LEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139
           LEPC MCA A+  AR+ R+ YGA  P+ G   +          H S  +  G   +    
Sbjct: 75  LEPCPMCAGALMQARVGRVVYGARQPRLGADGSWAPPPPPHPFHDSIVVEGGCLAEECAD 134

Query: 140 IIQDFFKER 148
           +++ FF+ R
Sbjct: 135 VMRAFFRRR 143


>gi|297847068|ref|XP_002891415.1| EMB2191 [Arabidopsis lyrata subsp. lyrata]
 gi|297337257|gb|EFH67674.1| EMB2191 [Arabidopsis lyrata subsp. lyrata]
          Length = 192

 Score = 72.4 bits (176), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 43/115 (37%), Positives = 62/115 (53%), Gaps = 15/115 (13%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  AL +A+ A    E+PVG V + + K+I+   NR  E ++ T HAE+ AI    +++
Sbjct: 15  YMGFALHQAKLALEALEVPVGCVLLEDGKVIASGRNRTNETRNATRHAEMEAID---QLV 71

Query: 67  SQ------------EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109
            Q            E   +  LYVT EPC MCA+A+S   I+ +YYG  N K GG
Sbjct: 72  GQWQEDGLSPSQVAEKFSKCILYVTCEPCIMCASALSFLGIKEVYYGCPNDKFGG 126


>gi|218885276|ref|YP_002434597.1| CMP/dCMP deaminase zinc-binding [Desulfovibrio vulgaris str.
           'Miyazaki F']
 gi|218756230|gb|ACL07129.1| CMP/dCMP deaminase zinc-binding [Desulfovibrio vulgaris str.
           'Miyazaki F']
          Length = 175

 Score = 72.4 bits (176), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 45/130 (34%), Positives = 64/130 (49%), Gaps = 1/130 (0%)

Query: 21  RNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVT 79
           + E+PVGAV V    +II    N      D +AHAE++A+R  CR      L    L VT
Sbjct: 46  QGEVPVGAVVVDRQGRIIGTGHNTPVASHDPSAHAEMVALREACRNTGNYRLDGAVLVVT 105

Query: 80  LEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139
           LEPC MCA A+  AR+  + YGA + K G + +          +H       +       
Sbjct: 106 LEPCLMCAGAMVHARVAGVVYGAPDLKAGAVTSCLDALDQPFHNHRVWHMGHVRAAECGA 165

Query: 140 IIQDFFKERR 149
           ++Q+FF+ERR
Sbjct: 166 LLQEFFRERR 175


>gi|307823574|ref|ZP_07653803.1| CMP/dCMP deaminase zinc-binding [Methylobacter tundripaludum SV96]
 gi|307735559|gb|EFO06407.1| CMP/dCMP deaminase zinc-binding [Methylobacter tundripaludum SV96]
          Length = 155

 Score = 72.0 bits (175), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 38/99 (38%), Positives = 60/99 (60%), Gaps = 1/99 (1%)

Query: 6   VFMSCALE-EAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           VF+  A++  A+NA      P GA+ V +N++++ +GN+     D TAHAE++AIR+ C+
Sbjct: 4   VFLQQAVDLAAENARSGQGGPYGAIIVKDNQLVAASGNKVTSTIDPTAHAEVMAIRLACK 63

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
            L+   L    LY + EPC MC  AI  AR+ ++Y+  S
Sbjct: 64  KLNDFQLQGCILYSSCEPCPMCLGAIYWARLAKVYFACS 102


>gi|61098160|ref|NP_080024.3| tRNA-specific adenosine deaminase 2 [Mus musculus]
 gi|81885246|sp|Q6P6J0|ADAT2_MOUSE RecName: Full=tRNA-specific adenosine deaminase 2; AltName:
           Full=Deaminase domain-containing protein 1; AltName:
           Full=tRNA-specific adenosine-34 deaminase subunit ADAT2
 gi|38328211|gb|AAH62195.1| Adenosine deaminase, tRNA-specific 2, TAD2 homolog (S. cerevisiae)
           [Mus musculus]
 gi|148671551|gb|EDL03498.1| deaminase domain containing 1 [Mus musculus]
          Length = 191

 Score = 72.0 bits (175), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 44/149 (29%), Positives = 74/149 (49%), Gaps = 8/149 (5%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  A+  A+ A    E+PVG + V NN+++ +  N   + K+ T HAE++AI       
Sbjct: 25  WMEEAMRMAKEALENIEVPVGCLMVYNNEVVGKGRNEVNQTKNATRHAEMVAIDQVLDWC 84

Query: 67  SQE------ILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT-- 118
            Q       +     LYVT+EPC MCAAA+ L +I  + YG  N + GG  +     +  
Sbjct: 85  HQHGQSPSTVFEHTVLYVTVEPCIMCAAALRLMKIPLVVYGCQNERFGGCGSVLNIASAD 144

Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKE 147
           L       +  PG   + + ++++ F+K+
Sbjct: 145 LPNTGRPFQCIPGYRAEEAVELLKTFYKQ 173


>gi|308803957|ref|XP_003079291.1| Cytosine deaminase FCY1 and related enzymes (ISS) [Ostreococcus
           tauri]
 gi|116057746|emb|CAL53949.1| Cytosine deaminase FCY1 and related enzymes (ISS) [Ostreococcus
           tauri]
          Length = 205

 Score = 72.0 bits (175), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 49/149 (32%), Positives = 72/149 (48%), Gaps = 16/149 (10%)

Query: 11  ALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEI 70
           AL EA+ A    E+P G   V + +I++R  N     ++ T HAE  A+    R    ++
Sbjct: 34  ALREARRALDAWEVPCGCALVRDGEIVARGRNATNRTRNGTRHAEFEAVDALLRAHDGDV 93

Query: 71  ----LPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT-------- 118
                 E+ LYVT EPC MCA A+S   +RR+ YG +N K GG  NGT            
Sbjct: 94  DACGFEEMTLYVTCEPCVMCAGAMSALGVRRVVYGCANDKFGG--NGTVLDVHDSGCGRC 151

Query: 119 --LATCHHSPEIYPGISEQRSRQIIQDFF 145
             + T   + E   G+ E  + ++ QDF+
Sbjct: 152 DGVGTKGATYESVGGLFETEAIRLFQDFY 180


>gi|327261885|ref|XP_003215757.1| PREDICTED: tRNA-specific adenosine deaminase 2-like [Anolis
           carolinensis]
          Length = 160

 Score = 72.0 bits (175), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 40/102 (39%), Positives = 56/102 (54%), Gaps = 7/102 (6%)

Query: 15  AQNAALRN-EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS------ 67
           A   AL N E+PVG + V NN++I +  N   E K+ T HAE++AI              
Sbjct: 2   AAKEALENGEVPVGCLMVYNNEVIGKGKNEVNETKNATRHAEMVAIDQAIDWCHKQKKRM 61

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109
           +E+     LYVT+EPC MCAAA+ + +I  + YG  N + GG
Sbjct: 62  EEVFLHTVLYVTVEPCIMCAAALRMMKIPLVVYGCQNERFGG 103


>gi|221129263|ref|XP_002158148.1| PREDICTED: similar to tRNA-specific adenosine deaminase [Hydra
           magnipapillata]
          Length = 226

 Score = 72.0 bits (175), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 40/108 (37%), Positives = 61/108 (56%), Gaps = 5/108 (4%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  AL  A+ A  + E+PVG V + +N +I+   N     K+ T HAEI+A+       
Sbjct: 46  FMKKALVMAKVALEKGEVPVGCVIIHDNIVIADGYNDVNRTKNATRHAEIIALEKARFYF 105

Query: 67  SQ-----EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109
            Q       + E  LYVT EPC MCAAA+ ++ +++++YG +N + GG
Sbjct: 106 LQAGKNLNSMSECVLYVTTEPCIMCAAALRISGLKKVFYGCTNQRFGG 153


>gi|169234864|ref|NP_001108500.1| deaminase domain containing 1 [Rattus norvegicus]
 gi|165970946|gb|AAI58617.1| Deadc1 protein [Rattus norvegicus]
          Length = 191

 Score = 72.0 bits (175), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 45/149 (30%), Positives = 75/149 (50%), Gaps = 8/149 (5%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM---GC 63
           +M  A+  A+ A    E+PVG + V NN+++ +  N   + K+ T HAE++AI      C
Sbjct: 25  WMEEAMRMAKEALENIEVPVGCLMVYNNEVVGKGRNEVNQTKNATRHAEMVAIDQVLDWC 84

Query: 64  RILSQE---ILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT-- 118
               Q    +     LYVT+EPC MCAAA+ L +I  + YG  N + GG  +     +  
Sbjct: 85  HRHGQSPSAVFEHTVLYVTVEPCIMCAAALRLMKIPLVVYGCQNERFGGCGSVLNIASAD 144

Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKE 147
           L       +  PG   + + ++++ F+K+
Sbjct: 145 LPNTGRPFQCIPGYRAEEAVELLKTFYKQ 173


>gi|330933338|ref|XP_003304140.1| hypothetical protein PTT_16586 [Pyrenophora teres f. teres 0-1]
 gi|311319472|gb|EFQ87774.1| hypothetical protein PTT_16586 [Pyrenophora teres f. teres 0-1]
          Length = 293

 Score = 72.0 bits (175), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 48/142 (33%), Positives = 71/142 (50%), Gaps = 6/142 (4%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  A+  A+ A   +E PVG V V +  II R  N      + T HAE +AI     IL
Sbjct: 71  FMREAIAMAELALKSDETPVGCVFVKDGHIIGRGMNETNRTLNGTRHAEFVAI---AGIL 127

Query: 67  SQE---ILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123
           S+    IL E DLYVT+EPC MCA+ +    IR +Y+G  N + GG       ++  +  
Sbjct: 128 SKHPISILNETDLYVTVEPCVMCASMLRQYGIRAVYFGCWNERFGGTGGVLNIHSDPSVD 187

Query: 124 HSPEIYPGISEQRSRQIIQDFF 145
               +  GI  + +  +++ F+
Sbjct: 188 KPYPVTGGIFREEAIMLLRKFY 209


>gi|126696279|ref|YP_001091165.1| putative cytidine/deoxycytidylate deaminase [Prochlorococcus
           marinus str. MIT 9301]
 gi|126543322|gb|ABO17564.1| putative cytidine/deoxycytidylate deaminase [Prochlorococcus
           marinus str. MIT 9301]
          Length = 171

 Score = 72.0 bits (175), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 45/144 (31%), Positives = 72/144 (50%), Gaps = 2/144 (1%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           +MS  L  ++    + E+P+ ++ +    + I R  NR     D   HAEI+A+R    I
Sbjct: 26  WMSSILRRSEEIG-KVELPICSIILDERGRCIGRGVNRRNINNDPLGHAEIMALRQASLI 84

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
            +     E  +   LEPCTMCA+A+  AR+ ++ +GA + K GG+          + HH 
Sbjct: 85  KNDWRFNECIIITNLEPCTMCASALIQARMGKVVFGAYDKKRGGLGGSIDLSKHKSSHHK 144

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
            EI  GI E    + +Q +FK+ R
Sbjct: 145 MEIVGGILEDECCKNLQLWFKKLR 168


>gi|89097617|ref|ZP_01170506.1| guanine deaminase [Bacillus sp. NRRL B-14911]
 gi|89087913|gb|EAR67025.1| guanine deaminase [Bacillus sp. NRRL B-14911]
          Length = 159

 Score = 72.0 bits (175), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 53/144 (36%), Positives = 66/144 (45%), Gaps = 18/144 (12%)

Query: 7   FMSCALEEA-QNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           FM  A+E A +NAA     P GAV V +  +I    NR   L D TAHAEI AIR  C  
Sbjct: 9   FMENAVEAALENAAAHLGGPFGAVVVKDGTVIGTGTNRVTSLNDPTAHAEIQAIRAACLH 68

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           L    L   ++Y + EPC MC  AI  AR + +Y+  +           QF         
Sbjct: 69  LQDFQLSGCEIYTSCEPCPMCFGAIYWARPKAVYFACTKEDAAAAGFDDQF--------- 119

Query: 126 PEIYPGIS---EQRS---RQIIQD 143
             IY  +S   EQRS   RQ+  D
Sbjct: 120 --IYEQLSLPLEQRSIEMRQVKMD 141


>gi|149538332|ref|XP_001507477.1| PREDICTED: similar to DEADC1 protein, partial [Ornithorhynchus
           anatinus]
          Length = 121

 Score = 72.0 bits (175), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 42/104 (40%), Positives = 57/104 (54%), Gaps = 12/104 (11%)

Query: 15  AQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQ------ 68
           AQ A    E+PVG + V NNKI+    N   E K+ T HAE++AI    ++L+       
Sbjct: 1   AQEALENGEVPVGCLMVYNNKIVGMGRNEVNETKNATRHAEMVAID---QVLNWCLRRGK 57

Query: 69  ---EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109
              E+     LYVT+EPC MCAAA+ + RI  + YG  N + GG
Sbjct: 58  NPTEVFQRTVLYVTVEPCIMCAAALRIMRIPLVVYGCQNERFGG 101


>gi|50954049|ref|YP_061337.1| cytosine/adenosine deaminase [Leifsonia xyli subsp. xyli str.
           CTCB07]
 gi|50950531|gb|AAT88232.1| cytosine/adenosine deaminase [Leifsonia xyli subsp. xyli str.
           CTCB07]
          Length = 143

 Score = 72.0 bits (175), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 45/132 (34%), Positives = 66/132 (50%), Gaps = 7/132 (5%)

Query: 22  NEIPVGAVAVLNNKIISRAGNRNREL-KDVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80
            ++PV A+ V   + +   G   REL +D TAHAE+LA+R      +   L    L VTL
Sbjct: 15  GDVPVAALVVDAGERVIGTGRNERELLRDPTAHAEVLALREAASSRADWNLEGCTLVVTL 74

Query: 81  EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP---EIYPGISEQRS 137
           EPC MCA AI  AR+  + +GA + K G        Y +      P   E+Y G+  +  
Sbjct: 75  EPCAMCAGAILGARVTTVVFGAWDEKAGA---AGSLYDILRDRRLPARSEVYAGVLAEEC 131

Query: 138 RQIIQDFFKERR 149
           R ++  FF+ +R
Sbjct: 132 RALLLAFFEAKR 143


>gi|313680072|ref|YP_004057811.1| tRNA(ile)-lysidine synthetase [Oceanithermus profundus DSM 14977]
 gi|313152787|gb|ADR36638.1| tRNA(Ile)-lysidine synthetase [Oceanithermus profundus DSM 14977]
          Length = 522

 Score = 72.0 bits (175), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 43/127 (33%), Positives = 65/127 (51%), Gaps = 7/127 (5%)

Query: 23  EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEP 82
           E+P+GAV V   + +  + N      + TAHAE+LA+R       +++LP   LYVTLEP
Sbjct: 399 EVPIGAVVVREGEELGASANAVEARVNATAHAELLALRAAQERAGEKVLPGATLYVTLEP 458

Query: 83  CTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQ 142
           C MC  A+  AR+ R+ +   NPK G +       T      S E+  G   + S  +++
Sbjct: 459 CPMCLGALIEARVGRVVWATENPKAGAV-------TRYGMDASLELEGGRLARESAMLLK 511

Query: 143 DFFKERR 149
            FF + R
Sbjct: 512 GFFADLR 518


>gi|111220122|ref|YP_710916.1| tRNA-specific adenosine deaminase [Frankia alni ACN14a]
 gi|111147654|emb|CAJ59309.1| tRNA-specific adenosine deaminase [Frankia alni ACN14a]
          Length = 163

 Score = 72.0 bits (175), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 56/143 (39%), Positives = 74/143 (51%), Gaps = 1/143 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELK-DVTAHAEILAIRMGCRIL 66
           M  AL +A+ A    ++PVGAV V     +  AG   RE   D TAHAE+LA+R     +
Sbjct: 16  MGLALAQARLAPEHGDVPVGAVVVGPEGTVLGAGRNTRERDGDPTAHAEVLALRAAAARV 75

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L    L VTLEPCTMCA A+ LAR+ RL YGA + K G + +          +H P
Sbjct: 76  GSWRLSGATLVVTLEPCTMCAGALVLARVDRLVYGAVDDKAGAVGSLWDVVRDRRLNHRP 135

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+  G+       ++ DFF  RR
Sbjct: 136 EVISGVRAAECATLLADFFTARR 158


>gi|88812724|ref|ZP_01127970.1| guanine deaminase [Nitrococcus mobilis Nb-231]
 gi|88789962|gb|EAR21083.1| guanine deaminase [Nitrococcus mobilis Nb-231]
          Length = 156

 Score = 72.0 bits (175), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 35/92 (38%), Positives = 48/92 (52%)

Query: 25  PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84
           P GAV V +  +++   NR     D TAHAE++AIR  CRIL    L +  +Y + EPC 
Sbjct: 25  PFGAVIVHDGCVVAEGWNRVWSAMDPTAHAEVVAIRRACRILETYQLADCSIYTSCEPCP 84

Query: 85  MCAAAISLARIRRLYYGASNPKGGGIENGTQF 116
           MC  AI  AR++ +YY  +      I     F
Sbjct: 85  MCLGAIYWARLQVIYYANTRDDAAAIGFDDSF 116


>gi|123966234|ref|YP_001011315.1| putative cytidine/deoxycytidylate deaminase [Prochlorococcus
           marinus str. MIT 9515]
 gi|123200600|gb|ABM72208.1| putative cytidine/deoxycytidylate deaminase [Prochlorococcus
           marinus str. MIT 9515]
          Length = 165

 Score = 72.0 bits (175), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 41/128 (32%), Positives = 62/128 (48%), Gaps = 1/128 (0%)

Query: 23  EIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81
           E+P+ A  +    + I R  N+     D   HAE++A+R    I +     E  + V LE
Sbjct: 35  ELPITAFIIDERGRCIGRGSNKRETNNDPLGHAELIALRQASWIKNDWRFNECSIIVNLE 94

Query: 82  PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141
           PCTMCAAA+  AR+  + YGA + K GG           + HH   +  GI ++     I
Sbjct: 95  PCTMCAAALVQARMGNVIYGAEDHKRGGFGGTIDLSKHESAHHKMNVIRGILDKDCENRI 154

Query: 142 QDFFKERR 149
           + +FK+ R
Sbjct: 155 KIWFKKLR 162


>gi|308272592|emb|CBX29196.1| hypothetical protein N47_J01770 [uncultured Desulfobacterium sp.]
          Length = 172

 Score = 72.0 bits (175), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 50/144 (34%), Positives = 73/144 (50%), Gaps = 6/144 (4%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIIS---RAGNRNRELKDVTAHAEILAIR--M 61
           FM  AL  AQ A  + E PVG V V  +KII+   R G     L +V  HAEI+A+R   
Sbjct: 8   FMEKALNLAQTALEQGEFPVGCVLVHKDKIIATGKREGTAKSVLNEVD-HAEIIALRNLA 66

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
           G +  ++    E+ +Y T+EPC MC  AI LA I ++ +   +  GGG    T+  +   
Sbjct: 67  GMKDYNEISRQEIIIYCTMEPCLMCFGAILLAGIGKIVFAYEDVMGGGTNCNTKDLSPLY 126

Query: 122 CHHSPEIYPGISEQRSRQIIQDFF 145
             +   I PG+  + S  I + +F
Sbjct: 127 KDNKISITPGVLRKESLNIFKMYF 150


>gi|260549627|ref|ZP_05823845.1| guanine deaminase [Acinetobacter sp. RUH2624]
 gi|260407420|gb|EEX00895.1| guanine deaminase [Acinetobacter sp. RUH2624]
          Length = 160

 Score = 72.0 bits (175), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 40/107 (37%), Positives = 59/107 (55%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           MK+  +F+  ALE A +   +   P GAV V + K+I+   N+     D TAHAE+LAIR
Sbjct: 1   MKENQMFLRQALELAYHNVEKGGRPFGAVIVKDGKVIASGVNQILTTNDPTAHAELLAIR 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKG 107
              ++L    L    ++ +  PC MC AA+ LA I+ ++Y  SN  G
Sbjct: 61  AASQVLGTANLEGCSVFASGHPCPMCMAAMRLAGIKTVHYAYSNEDG 107


>gi|124009723|ref|ZP_01694394.1| guanine deaminase [Microscilla marina ATCC 23134]
 gi|123984327|gb|EAY24671.1| guanine deaminase [Microscilla marina ATCC 23134]
          Length = 158

 Score = 72.0 bits (175), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 35/86 (40%), Positives = 49/86 (56%)

Query: 25  PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84
           P GAV V N +II+   NR    +D TAHAE++AIR  C++L+   L +  +Y + EPC 
Sbjct: 27  PFGAVVVKNGEIIAEGHNRVTSTQDPTAHAEVVAIREACKVLNTFQLDDCVIYTSCEPCP 86

Query: 85  MCAAAISLARIRRLYYGASNPKGGGI 110
           MC  AI  AR + +YY  +      I
Sbjct: 87  MCLGAIYWARPKAVYYACNREDAAHI 112


>gi|291244202|ref|XP_002741990.1| PREDICTED: tRNA-specific adenosine deaminase 2-like [Saccoglossus
           kowalevskii]
          Length = 209

 Score = 72.0 bits (175), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 44/148 (29%), Positives = 76/148 (51%), Gaps = 8/148 (5%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM---GC 63
           +M  +L+ A +A    E+PVG + V  +++I +  N   E ++ T HAE++AI      C
Sbjct: 15  WMEKSLDMAHDALFNGEVPVGCLMVYKDEVIGKGRNCVNETRNATRHAEMVAIDEVIGWC 74

Query: 64  RILSQ---EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              +Q    +  +  LYVT+EPC MCA A+ L  +  + YG SN + GG  +    +   
Sbjct: 75  EKSNQVKEAVFSKTVLYVTVEPCIMCAGALRLLHVPLVVYGCSNERFGGCGSVLNVHKDD 134

Query: 121 TCHHSP--EIYPGISEQRSRQIIQDFFK 146
             +H    +   GI  + +  +++DF+K
Sbjct: 135 IDNHGKPFKCISGIFAEEAIALLKDFYK 162


>gi|75764881|ref|ZP_00744241.1| Cytosine deaminase family [Bacillus thuringiensis serovar
           israelensis ATCC 35646]
 gi|74487631|gb|EAO51487.1| Cytosine deaminase family [Bacillus thuringiensis serovar
           israelensis ATCC 35646]
          Length = 104

 Score = 72.0 bits (175), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 33/79 (41%), Positives = 47/79 (59%)

Query: 71  LPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYP 130
           L +  LYVTLEPC MCA  I L+R++R+ YGAS+PKGG         T    +H  E+  
Sbjct: 11  LEDATLYVTLEPCPMCAGGIVLSRVKRVVYGASDPKGGCAGTLMNLLTDERFNHQCEVVT 70

Query: 131 GISEQRSRQIIQDFFKERR 149
           G+ E+    ++ +FF+E R
Sbjct: 71  GVLEEECGTLLTNFFRELR 89


>gi|118586582|ref|ZP_01544023.1| cytidine/deoxycytidylate deaminase [Oenococcus oeni ATCC BAA-1163]
 gi|118432961|gb|EAV39686.1| cytidine/deoxycytidylate deaminase [Oenococcus oeni ATCC BAA-1163]
          Length = 157

 Score = 72.0 bits (175), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 41/103 (39%), Positives = 60/103 (58%), Gaps = 2/103 (1%)

Query: 5   NVFMSCALEEA-QNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
           +V+M  A+E+A +N  L+   P GAV V + ++I  A N      D TAHAEI+AIR  C
Sbjct: 4   SVYMKLAIEQANENIVLKEGGPFGAVIVRDQEVICAAHNMVLANLDPTAHAEIIAIRKAC 63

Query: 64  RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPK 106
           ++L+   L +  LY +  PC MC +A   A I+ + YG + PK
Sbjct: 64  KVLATRDLSDCTLYTSAYPCPMCLSATIWANIKEVRYG-NTPK 105


>gi|159906167|ref|YP_001549829.1| CMP/dCMP deaminase zinc-binding [Methanococcus maripaludis C6]
 gi|159887660|gb|ABX02597.1| CMP/dCMP deaminase zinc-binding [Methanococcus maripaludis C6]
          Length = 145

 Score = 71.6 bits (174), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 46/144 (31%), Positives = 71/144 (49%), Gaps = 18/144 (12%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  A++EA+       IP+GAV V  NKII R  NR  +      HAE+ A+    R L
Sbjct: 4   FMEEAIKEAKLGLEEGGIPIGAVLVYKNKIIGRGHNRRVQTNSAILHAEMDALENAGR-L 62

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG----IENGTQFYTLATC 122
           + +I    +LY TL PC MC+ A+ L +I+++  G +    G     I+NG     L   
Sbjct: 63  TSDIYKNCELYTTLSPCIMCSGAVLLYKIKKVVIGENKTFLGAEDLLIKNGVSVEVL--- 119

Query: 123 HHSPEIYPGISEQRSRQIIQDFFK 146
                     +++R  ++++DF K
Sbjct: 120 ----------NDERCVKMMEDFIK 133


>gi|12060484|dbj|BAB20627.1| hypothetical protein [Thermosynechococcus elongatus]
          Length = 105

 Score = 71.6 bits (174), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 42/92 (45%), Positives = 55/92 (59%), Gaps = 1/92 (1%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
           + +M  A+  A+ A   +E+PVGAV V   N++I+   NR +   D TAHAEI+A+R   
Sbjct: 14  DFWMQQAIALAEQAGAADEVPVGAVIVSAENELIATGENRRQRDHDPTAHAEIIALRRAG 73

Query: 64  RILSQEILPEVDLYVTLEPCTMCAAAISLARI 95
           + L    L    LYVTLEPC MCA AI  ARI
Sbjct: 74  QRLGTWYLTGCRLYVTLEPCPMCAGAIVQARI 105


>gi|319441800|ref|ZP_07990956.1| putative cytosine/adenosine deaminase [Corynebacterium variabile
           DSM 44702]
          Length = 167

 Score = 71.6 bits (174), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 50/145 (34%), Positives = 74/145 (51%), Gaps = 6/145 (4%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKI-ISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M+ ALE A +     ++PVGAV    +   ++ A NR     D TAHAE+LA+R      
Sbjct: 26  MARALEVAASTP-DGDVPVGAVVYAPDGTELAAATNRREADADPTAHAEVLALRAATAAH 84

Query: 67  SQEI-LPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF-YTLATCHH 124
                L +  L VTLEPC MCA A+  AR+R + +GA  P+ G    G+ F     +  H
Sbjct: 85  GDAWRLTDCTLVVTLEPCAMCAGAMVGARVRTVVFGAWEPRTGAC--GSVFDVARESPLH 142

Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149
           + E+  G+       ++++FF  RR
Sbjct: 143 AVEVRGGVLLDECEDLVREFFSSRR 167


>gi|87124293|ref|ZP_01080142.1| putative cytidine/deoxycytidylate deaminase [Synechococcus sp.
           RS9917]
 gi|86167865|gb|EAQ69123.1| putative cytidine/deoxycytidylate deaminase [Synechococcus sp.
           RS9917]
          Length = 147

 Score = 71.6 bits (174), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 68/143 (47%), Gaps = 1/143 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M   L  A       E+PV AV +    + I   GNR    +D   HAE++A+    ++ 
Sbjct: 1   MGRLLRRADQLGREGEVPVCAVILDGLGRCIGYGGNRRERQRDPLGHAELVALGQASQLR 60

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
                 +  L VTLEPC MCA A+  AR+ ++ + A + K G + +        + HH  
Sbjct: 61  QDWRFNDCTLLVTLEPCPMCAGALVQARMGQVIFAAWDSKRGALGSTIDLSQHRSAHHHM 120

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
            +  G+ E  +R  ++ +F++RR
Sbjct: 121 RVVGGVMEPEARTRLEAWFRQRR 143


>gi|154487580|ref|ZP_02028987.1| hypothetical protein BIFADO_01437 [Bifidobacterium adolescentis
           L2-32]
 gi|154083709|gb|EDN82754.1| hypothetical protein BIFADO_01437 [Bifidobacterium adolescentis
           L2-32]
          Length = 149

 Score = 71.6 bits (174), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 43/129 (33%), Positives = 61/129 (47%), Gaps = 1/129 (0%)

Query: 22  NEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80
            E+PVGAV +  + + I R  N      D  AHAE+ A+R     L    L +  L VTL
Sbjct: 21  GEVPVGAVVLDADGRAIGRGRNLRETHADPLAHAEVQAMREAAASLGTWNLADCTLVVTL 80

Query: 81  EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140
           EPC MCA A     + R+ +GA + K G   +             PE+  G+ E    ++
Sbjct: 81  EPCPMCAGACLQTHVGRIVFGAWDAKLGACGSVWDIPRDPHVGPVPEVVGGVCEAECGRL 140

Query: 141 IQDFFKERR 149
           + DFF +RR
Sbjct: 141 MTDFFADRR 149


>gi|17554608|ref|NP_498663.1| hypothetical protein R13A5.10 [Caenorhabditis elegans]
 gi|15144367|gb|AAK84461.1|AC006679_2 Hypothetical protein R13A5.10 [Caenorhabditis elegans]
          Length = 153

 Score = 71.6 bits (174), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 40/110 (36%), Positives = 55/110 (50%), Gaps = 1/110 (0%)

Query: 7   FMSCALEEAQNAALRNEI-PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           FM  A+EEA+    + +  P GAV V + K+I    N     KD TAHAE+ AIR  C+ 
Sbjct: 3   FMKLAIEEAKKGMEKGDGGPFGAVIVKDGKVIGSGHNMVLVTKDPTAHAEVTAIRNTCKN 62

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
           +    L    LY +  PC MC  A   +R+  +YYGA++     I  G  
Sbjct: 63  VDNFDLSGCQLYTSCYPCPMCMGAALWSRVDAIYYGATSQDAANIGFGDH 112


>gi|268575234|ref|XP_002642596.1| Hypothetical protein CBG09150 [Caenorhabditis briggsae]
 gi|187032061|emb|CAP28830.1| hypothetical protein CBG_09150 [Caenorhabditis briggsae AF16]
          Length = 153

 Score = 71.6 bits (174), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 40/110 (36%), Positives = 56/110 (50%), Gaps = 1/110 (0%)

Query: 7   FMSCALEEAQNAALRNEI-PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           FM  A+EEA+   +  +  P GAV V + K+I    N     KD TAHAE+ AIR  C+ 
Sbjct: 3   FMKLAIEEAKKGMVAGDGGPFGAVIVKDGKVIGSGHNMVLVTKDPTAHAEVTAIRNTCKN 62

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
           +    L    LY +  PC MC  A   +R+  +YYGA++ +   I  G  
Sbjct: 63  VDSFDLSGCQLYTSCYPCPMCMGAALWSRVDAIYYGATSSEAAEIGFGDH 112


>gi|315305704|ref|ZP_07875310.1| tRNA-specific adenosine deaminase [Listeria ivanovii FSL F6-596]
 gi|313625927|gb|EFR95453.1| tRNA-specific adenosine deaminase [Listeria ivanovii FSL F6-596]
          Length = 84

 Score = 71.2 bits (173), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 38/79 (48%), Positives = 48/79 (60%)

Query: 7  FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
          FM  ALEEA+ A    E+P+GAV VL+ KII RA N     ++   HAE+LAI+  C   
Sbjct: 6  FMQQALEEAEKAREIGEVPIGAVVVLDGKIIGRAHNLRETSQNAVTHAELLAIQDACNYQ 65

Query: 67 SQEILPEVDLYVTLEPCTM 85
          +   L   +LYVTLEPC M
Sbjct: 66 NSWRLSGAELYVTLEPCPM 84


>gi|281351029|gb|EFB26613.1| hypothetical protein PANDA_000408 [Ailuropoda melanoleuca]
          Length = 158

 Score = 71.2 bits (173), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 43/138 (31%), Positives = 71/138 (51%), Gaps = 9/138 (6%)

Query: 19  ALRN-EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQ------EIL 71
           AL N E+PVG + V NN+++ +  N   + K+ T HAE++AI        +      E+ 
Sbjct: 4   ALENIEVPVGCLMVYNNEVVGKGRNEVNQTKNATRHAEMVAIDQALDWCHRSGKSPSEVF 63

Query: 72  PEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT--LATCHHSPEIY 129
               LYVT+EPC MCAAA+ L +I  + YG  N + GG  +     +  L       +  
Sbjct: 64  EHTVLYVTVEPCIMCAAALRLMKIPLVVYGCQNERFGGCGSVLNIASADLPNTGRPFKCI 123

Query: 130 PGISEQRSRQIIQDFFKE 147
           PG   + + ++++ F+K+
Sbjct: 124 PGYRAEEAVEMLKTFYKQ 141


>gi|332974309|gb|EGK11241.1| guanine deaminase [Desmospora sp. 8437]
          Length = 146

 Score = 71.2 bits (173), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 33/89 (37%), Positives = 53/89 (59%)

Query: 15  AQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEV 74
           A+N +     P GAV V   ++I+   N   +++D TAHAEI AIR  CR L + +L + 
Sbjct: 15  AENVSRHRGEPFGAVIVREGEVIATGVNETGKIQDPTAHAEIQAIREACRKLGKTVLDDC 74

Query: 75  DLYVTLEPCTMCAAAISLARIRRLYYGAS 103
           +++ + EPC+MC  AI  A  R +++ A+
Sbjct: 75  EMFASGEPCSMCMGAIQWAGFRAVWFAAA 103


>gi|229551942|ref|ZP_04440667.1| guanine deaminase [Lactobacillus rhamnosus LMS2-1]
 gi|229314677|gb|EEN80650.1| guanine deaminase [Lactobacillus rhamnosus LMS2-1]
          Length = 167

 Score = 71.2 bits (173), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 41/96 (42%), Positives = 54/96 (56%), Gaps = 1/96 (1%)

Query: 7   FMSCALEEAQ-NAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           FM+ A EEA+ N    +  P G V V N +++SRA NR     D TAH EI AIR   + 
Sbjct: 18  FMAMADEEAKANVNGSDGGPFGCVIVKNGQVVSRAHNRVLVDHDPTAHGEITAIRKAGQA 77

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
           L    L   +LY +  PC MC +AI  A I+++YYG
Sbjct: 78  LGTHDLSGCELYTSAMPCPMCLSAIIWANIKQVYYG 113


>gi|258508144|ref|YP_003170895.1| guanine deaminase [Lactobacillus rhamnosus GG]
 gi|258539359|ref|YP_003173858.1| guanine deaminase [Lactobacillus rhamnosus Lc 705]
 gi|257148071|emb|CAR87044.1| Guanine deaminase [Lactobacillus rhamnosus GG]
 gi|257151035|emb|CAR90007.1| Guanine deaminase [Lactobacillus rhamnosus Lc 705]
 gi|259649462|dbj|BAI41624.1| deaminase [Lactobacillus rhamnosus GG]
          Length = 155

 Score = 71.2 bits (173), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 41/96 (42%), Positives = 54/96 (56%), Gaps = 1/96 (1%)

Query: 7   FMSCALEEAQ-NAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           FM+ A EEA+ N    +  P G V V N +++SRA NR     D TAH EI AIR   + 
Sbjct: 6   FMAMADEEAKANVNGSDGGPFGCVIVKNGQVVSRAHNRVLVDHDPTAHGEITAIRKAGQA 65

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
           L    L   +LY +  PC MC +AI  A I+++YYG
Sbjct: 66  LGTHDLSGCELYTSAMPCPMCLSAIIWANIKQVYYG 101


>gi|320354083|ref|YP_004195422.1| CMP/dCMP deaminase zinc-binding protein [Desulfobulbus propionicus
           DSM 2032]
 gi|320122585|gb|ADW18131.1| CMP/dCMP deaminase zinc-binding protein [Desulfobulbus propionicus
           DSM 2032]
          Length = 173

 Score = 71.2 bits (173), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 48/154 (31%), Positives = 79/154 (51%), Gaps = 14/154 (9%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNREL---KDVTAHAEIL 57
           M +   FM+ ALEEA+ A    E PVG   V NN I++R G R+  +   ++   HAE++
Sbjct: 2   MSEHEQFMAVALEEARLALAEGEFPVGCAMVANNGIVAR-GRRHNSIEGYRNEIDHAEVV 60

Query: 58  AIRMGCRILSQE---ILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGT 114
            +R   R+++++    L  V +Y T+EPC MC A + L+ IR   +   +  GGG     
Sbjct: 61  TLR---RLIAEQPGLDLATVTVYTTMEPCLMCYATLLLSGIRSFVWAYEDVMGGG--ANL 115

Query: 115 QFYTLATCHHSPEIY--PGISEQRSRQIIQDFFK 146
             Y L T +   +++    +    S ++ Q FF+
Sbjct: 116 PLYMLNTLYAQMQVHLIDRVLRTESLRLFQQFFR 149


>gi|294786275|ref|ZP_06751529.1| cytidine and deoxycytidylate deaminase family protein
           [Parascardovia denticolens F0305]
 gi|315225809|ref|ZP_07867597.1| cytidine and deoxycytidylate deaminase [Parascardovia denticolens
           DSM 10105]
 gi|294485108|gb|EFG32742.1| cytidine and deoxycytidylate deaminase family protein
           [Parascardovia denticolens F0305]
 gi|315119941|gb|EFT83073.1| cytidine and deoxycytidylate deaminase [Parascardovia denticolens
           DSM 10105]
          Length = 158

 Score = 71.2 bits (173), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 47/144 (32%), Positives = 73/144 (50%), Gaps = 1/144 (0%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           FM+ A  +A+ A L  ++PVGAV V    K+++++GN  +  K   +HAEI  ++ G   
Sbjct: 11  FMALAQAQARAAGLAGDVPVGAVLVDPQGKVLAQSGNGRQRGKGPLSHAEIEVMQAGAAA 70

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
                L    L VTLEPC MCA A   A + R+ +GA + K G   +             
Sbjct: 71  WGSWNLEGCTLVVTLEPCPMCAGAAVSAHLGRIVFGAWDQKMGACGSVWDIPRDPHIGFQ 130

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
           PE+  G+ E   + ++ +FF+ RR
Sbjct: 131 PEVVGGVGEAECQSLLTNFFRARR 154


>gi|291532926|emb|CBL06039.1| Cytosine/adenosine deaminases [Megamonas hypermegale ART12/1]
          Length = 157

 Score = 71.2 bits (173), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 40/98 (40%), Positives = 53/98 (54%), Gaps = 1/98 (1%)

Query: 7   FMSCALEEAQNAALRNEI-PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           FM  A +EA +    NE  P GAV V + KI+ R  NR     D T HAE+ AIR  C+ 
Sbjct: 6   FMLIATQEADSNLTTNEGGPFGAVIVKDGKIVGRGHNRVLIKHDPTCHAEVEAIRDACQN 65

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
           L    L   +LY +  PC MC +A   A I+++YYG +
Sbjct: 66  LGTHDLTGCELYTSCYPCPMCLSATIWANIKKVYYGNT 103


>gi|171741935|ref|ZP_02917742.1| hypothetical protein BIFDEN_01034 [Bifidobacterium dentium ATCC
           27678]
 gi|306824050|ref|ZP_07457423.1| tRNA(Ile)-lysidine synthase (tRNA(Ile)-lysidinesynthetase)
           [Bifidobacterium dentium ATCC 27679]
 gi|309800761|ref|ZP_07694896.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Bifidobacterium dentium JCVIHMP022]
 gi|171277549|gb|EDT45210.1| hypothetical protein BIFDEN_01034 [Bifidobacterium dentium ATCC
           27678]
 gi|304552703|gb|EFM40617.1| tRNA(Ile)-lysidine synthase (tRNA(Ile)-lysidinesynthetase)
           [Bifidobacterium dentium ATCC 27679]
 gi|308222606|gb|EFO78883.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Bifidobacterium dentium JCVIHMP022]
          Length = 151

 Score = 71.2 bits (173), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 45/130 (34%), Positives = 63/130 (48%), Gaps = 3/130 (2%)

Query: 22  NEIPVGAVAVLN--NKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVT 79
            E+PVGAV VL+   ++I R  N     +D  AHAE+ A+      L    L +  L VT
Sbjct: 21  GEVPVGAV-VLDAAGQVIGRGRNLREADRDPLAHAEVKAMTEAAHALGTWNLADCTLIVT 79

Query: 80  LEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139
           LEPC MCA A     I R+ +GA + K G   +             PE+  G+ E    +
Sbjct: 80  LEPCPMCAGACLQTHIGRIVFGAWDAKLGACGSVWDIPRDPHIGSVPEVIGGMHESECAR 139

Query: 140 IIQDFFKERR 149
           I+ DFF ++R
Sbjct: 140 ILTDFFTDKR 149


>gi|156387791|ref|XP_001634386.1| predicted protein [Nematostella vectensis]
 gi|156221468|gb|EDO42323.1| predicted protein [Nematostella vectensis]
          Length = 156

 Score = 71.2 bits (173), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 37/79 (46%), Positives = 44/79 (55%)

Query: 24  IPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83
           +P GAV   +NKII+   N +    D TAHAE+ AIR  C  L    L   DLY +  PC
Sbjct: 26  MPFGAVIAKDNKIIAETANLSFVNCDPTAHAEVSAIRQACSALKSRDLTGCDLYTSCYPC 85

Query: 84  TMCAAAISLARIRRLYYGA 102
            MC AAI  A I R+YY A
Sbjct: 86  AMCMAAIYWASISRVYYAA 104


>gi|308474568|ref|XP_003099505.1| hypothetical protein CRE_01142 [Caenorhabditis remanei]
 gi|308266694|gb|EFP10647.1| hypothetical protein CRE_01142 [Caenorhabditis remanei]
          Length = 153

 Score = 71.2 bits (173), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 40/110 (36%), Positives = 55/110 (50%), Gaps = 1/110 (0%)

Query: 7   FMSCALEEAQNAALRNEI-PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           FM  A+EEA+    + +  P GAV V + K+I    N     KD TAHAE+ AIR  C+ 
Sbjct: 3   FMKLAIEEAKKGMAKGDGGPFGAVIVKDGKVIGVGHNMVLVNKDPTAHAEVTAIRDACKN 62

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
           +    L    LY +  PC MC  A   +R+  +YYGA++     I  G  
Sbjct: 63  VDNFDLSGCQLYTSCYPCPMCMGAALWSRVDAVYYGATSEDAASIGFGDH 112


>gi|312219914|emb|CBX99856.1| hypothetical protein [Leptosphaeria maculans]
          Length = 259

 Score = 71.2 bits (173), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 47/142 (33%), Positives = 71/142 (50%), Gaps = 6/142 (4%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  A+  A+ A   +E PVG V V + +II R  N      + T HAE +AI     IL
Sbjct: 62  FMREAIAMAELALKSDETPVGCVFVKDGEIIGRGMNETNRTLNGTRHAEFVAI---ASIL 118

Query: 67  SQE---ILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123
           S+    IL E DLYVT+EPC MCA+ +    I+ +Y+G  N + GG       +   +  
Sbjct: 119 SKHPISILNETDLYVTVEPCVMCASMLRQYGIKAVYFGCWNERFGGTGGVLNVHCDPSVD 178

Query: 124 HSPEIYPGISEQRSRQIIQDFF 145
               +  GI  + +  +++ F+
Sbjct: 179 KPYPVTGGIFREEAIMLLRKFY 200


>gi|295395473|ref|ZP_06805668.1| tRNA-specific adenosine deaminase [Brevibacterium mcbrellneri ATCC
           49030]
 gi|294971644|gb|EFG47524.1| tRNA-specific adenosine deaminase [Brevibacterium mcbrellneri ATCC
           49030]
          Length = 142

 Score = 71.2 bits (173), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 37/108 (34%), Positives = 54/108 (50%)

Query: 42  NRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
           NR     D TAHAE++A+R     L +  L    L VTLEPC MCA A   AR+  + +G
Sbjct: 35  NRREADGDPTAHAEVVALRAAASRLGRWRLDGATLVVTLEPCAMCAGAAVGARVDAIVFG 94

Query: 102 ASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
           A + K G   +           H P++Y G+    +  ++++FF  RR
Sbjct: 95  AFDEKAGACGSQWDLPRDRGSLHRPQVYAGVMSVEAVHVLEEFFAARR 142


>gi|251798037|ref|YP_003012768.1| CMP/dCMP deaminase zinc-binding [Paenibacillus sp. JDR-2]
 gi|247545663|gb|ACT02682.1| CMP/dCMP deaminase zinc-binding [Paenibacillus sp. JDR-2]
          Length = 155

 Score = 71.2 bits (173), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 48/152 (31%), Positives = 70/152 (46%), Gaps = 10/152 (6%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M +  +FM  A++ ++ A      P GAV V N +I+    N+     D T HAE   +R
Sbjct: 1   MNQDEIFMREAIKLSKLAVEHGNEPFGAVLVKNGEIVYSNENQIYSATDPTFHAEAGLLR 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASN-------PKGGGIENG 113
             C       L E  LY + EPC MC+ A+   R+ RL Y AS+          G   +G
Sbjct: 61  RFCAETHITDLREYTLYSSCEPCFMCSGAMVWTRLGRLVYAASDMDLCNLLDAKGSPCSG 120

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
             F      HH PE+  GI ++ S  ++ D+F
Sbjct: 121 IVF---KHSHHKPEVLGGILKEESLSVLADYF 149


>gi|283457044|ref|YP_003361608.1| tRNA-specific adenosine deaminase [Bifidobacterium dentium Bd1]
 gi|283103678|gb|ADB10784.1| MesJ tRNA-specific adenosine deaminase [Bifidobacterium dentium
           Bd1]
          Length = 145

 Score = 70.9 bits (172), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 45/130 (34%), Positives = 63/130 (48%), Gaps = 3/130 (2%)

Query: 22  NEIPVGAVAVLN--NKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVT 79
            E+PVGAV VL+   ++I R  N     +D  AHAE+ A+      L    L +  L VT
Sbjct: 15  GEVPVGAV-VLDAAGQVIGRGRNLREADRDPLAHAEVKAMTEAAHALGTWNLADCTLIVT 73

Query: 80  LEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139
           LEPC MCA A     I R+ +GA + K G   +             PE+  G+ E    +
Sbjct: 74  LEPCPMCAGACLQTHIGRIVFGAWDAKLGACGSVWDIPRDPHIGSVPEVIGGMHESECAR 133

Query: 140 IIQDFFKERR 149
           I+ DFF ++R
Sbjct: 134 ILTDFFTDKR 143


>gi|88803350|ref|ZP_01118876.1| guanine deaminase [Polaribacter irgensii 23-P]
 gi|88780916|gb|EAR12095.1| guanine deaminase [Polaribacter irgensii 23-P]
          Length = 157

 Score = 70.9 bits (172), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 39/104 (37%), Positives = 54/104 (51%), Gaps = 1/104 (0%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEI-PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
           MK+   FMS A++ A      NE  P G + V +  II    N+     D TAHAE+ AI
Sbjct: 1   MKQHEEFMSAAVKAALKGMNNNEGGPFGCIIVKDGAIIGSGNNKVTSTNDPTAHAEVTAI 60

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
           R  C+ +    L    +Y + EPC MC  AI  AR  ++YYG++
Sbjct: 61  RDACKNIGSFQLDGCIIYTSCEPCPMCLGAIYWARPDKVYYGSN 104


>gi|170782870|ref|YP_001711204.1| tRNA-specific adenosine deaminase [Clavibacter michiganensis subsp.
           sepedonicus]
 gi|169157440|emb|CAQ02629.1| tRNA-specific adenosine deaminase [Clavibacter michiganensis subsp.
           sepedonicus]
          Length = 158

 Score = 70.9 bits (172), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 46/144 (31%), Positives = 66/144 (45%), Gaps = 1/144 (0%)

Query: 7   FMSCALEEAQNAA-LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           +M+ AL+EA+  A   +      V      +I R  N     +D TAHAE+ A+R     
Sbjct: 12  WMAVALDEARACAETGDVPVGAVVVDAAGVVIGRGRNLREARQDPTAHAEVEALRAAAEA 71

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
                L    L VTLEPC MCA AI  AR+ R+ +GA + K G   +           H 
Sbjct: 72  TGDRHLVGATLVVTLEPCVMCAGAILAARVPRVVFGAWDEKAGAAGSLYDVLRDRRLPHR 131

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
            E++ G+       ++ DFF +RR
Sbjct: 132 AEVFAGVLAAECAAVLDDFFADRR 155


>gi|313683576|ref|YP_004061314.1| cmp/dcmp deaminase zinc-binding protein [Sulfuricurvum kujiense DSM
           16994]
 gi|313156436|gb|ADR35114.1| CMP/dCMP deaminase zinc-binding protein [Sulfuricurvum kujiense DSM
           16994]
          Length = 152

 Score = 70.9 bits (172), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 51/142 (35%), Positives = 72/142 (50%), Gaps = 5/142 (3%)

Query: 5   NVFMSCALEEAQNAALRNEI-PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
           N +M+ A +EA      NE  P GA  V N  +I+ A N   +  D TAHAEI  IR   
Sbjct: 2   NTWMAIARDEALKGMDSNEGGPFGAAIVRNGSLIAAAHNEVLKSNDPTAHAEINVIRKAS 61

Query: 64  RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS--NPKGGGIENGTQFYTLAT 121
             L+   L +  LY T  PC MC  AI  ARI  +YY ++  +   GG ++   FYT+ T
Sbjct: 62  EKLATYDLSDCVLYTTCYPCPMCLGAILWARIPTVYYASTMDDAARGGFDD-KAFYTMIT 120

Query: 122 CHHSP-EIYPGISEQRSRQIIQ 142
              S  +++P  SE+ +R   +
Sbjct: 121 DPKSVLDLHPLDSEEGNRLFFR 142


>gi|325298986|ref|YP_004258903.1| Guanine deaminase [Bacteroides salanitronis DSM 18170]
 gi|324318539|gb|ADY36430.1| Guanine deaminase [Bacteroides salanitronis DSM 18170]
          Length = 155

 Score = 70.9 bits (172), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 36/77 (46%), Positives = 43/77 (55%)

Query: 25  PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84
           P GAV   N +IIS   NR     D TAHAE+ AIR  CR L    L   ++Y + EPC 
Sbjct: 24  PFGAVIARNGEIISTGTNRVTPDHDPTAHAEVSAIRAACRELGTFDLSGCEIYTSCEPCP 83

Query: 85  MCAAAISLARIRRLYYG 101
           MC  AI  A + R+YYG
Sbjct: 84  MCLGAIYWAHLDRMYYG 100


>gi|224130724|ref|XP_002328360.1| predicted protein [Populus trichocarpa]
 gi|222838075|gb|EEE76440.1| predicted protein [Populus trichocarpa]
          Length = 184

 Score = 70.9 bits (172), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 38/95 (40%), Positives = 58/95 (61%), Gaps = 1/95 (1%)

Query: 7   FMSCALEEA-QNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           F++ A+EEA +     +  P GAV V N++II    N   +  D TAHAE+ A+R  C+ 
Sbjct: 32  FLTRAVEEAYKGVECGDGGPFGAVVVQNDEIIMSCHNMVLKNTDPTAHAEVTAVREACKK 91

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
           L++  L + ++Y + EPC MC  AI L+R++RL Y
Sbjct: 92  LNRIELSDCEIYASCEPCPMCFGAIHLSRVKRLVY 126


>gi|145345338|ref|XP_001417171.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144577398|gb|ABO95464.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 170

 Score = 70.9 bits (172), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 50/158 (31%), Positives = 79/158 (50%), Gaps = 16/158 (10%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M  AL  A +A  + E+P+ AV V     ++++ A NR     D TAHAE+L IR+G   
Sbjct: 1   MRRALALALDAGSQGEVPIAAVLVDATTGEVVAEAANRCERDGDPTAHAEMLLIRLGAEK 60

Query: 66  LS-QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN-----------G 113
           L     L    +YVTLEPC MCA AI  +R+  + YGA N   G   +           G
Sbjct: 61  LGGWRHLKRTRMYVTLEPCAMCAGAILQSRVGGVTYGARNALLGADGSWAALLRNEDVGG 120

Query: 114 TQFYTLATCHHSP--EIYPGISEQRSRQIIQDFFKERR 149
           ++   +     +P  ++  G+  + + + +++FF+ RR
Sbjct: 121 SERAPVRAHPFTPDLDVKGGVLAEETGEAMREFFRRRR 158


>gi|326519634|dbj|BAK00190.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 154

 Score = 70.5 bits (171), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 43/98 (43%), Positives = 60/98 (61%), Gaps = 1/98 (1%)

Query: 7   FMSCALEEAQNAALRNE-IPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           F+S A+EEA  A  R    P GAV V N+K++    N   +  D TAHAE+ AIR  C+ 
Sbjct: 14  FLSIAVEEAYRAVDRGHGRPFGAVVVRNDKVVVSCHNMVVKNTDATAHAEVTAIREACKK 73

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
           L +  L + ++Y + EPC MC  A+ L+RI+RL YGA+
Sbjct: 74  LGKTDLSDCEMYASCEPCPMCFGAVRLSRIKRLVYGAT 111


>gi|305680082|ref|ZP_07402892.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Corynebacterium matruchotii ATCC 14266]
 gi|305660702|gb|EFM50199.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Corynebacterium matruchotii ATCC 14266]
          Length = 147

 Score = 70.5 bits (171), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 45/130 (34%), Positives = 62/130 (47%), Gaps = 2/130 (1%)

Query: 22  NEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEI-LPEVDLYVT 79
            ++PVGAV    +  +I R  NR     D TAHAEI+AIR   R       L +  + VT
Sbjct: 18  GDVPVGAVIFDPDGNVIGRGSNRREADGDPTAHAEIIAIREAVRNFHDGWRLTDCTIAVT 77

Query: 80  LEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139
           LEPC MCA A+  ARI  + +GA  PK G   +           + P++  G+       
Sbjct: 78  LEPCCMCAGALVAARIGTIIFGAYEPKMGACGSVFDVVRDPQVLYQPQVIGGVLADECAA 137

Query: 140 IIQDFFKERR 149
            +  FF+E R
Sbjct: 138 QLGVFFQECR 147


>gi|300711978|ref|YP_003737792.1| cytosine deaminase [Halalkalicoccus jeotgali B3]
 gi|299125661|gb|ADJ16000.1| cytosine deaminase [Halalkalicoccus jeotgali B3]
          Length = 280

 Score = 70.5 bits (171), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 36/100 (36%), Positives = 51/100 (51%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  A+E A+ AA R + P G+V V + +I+    NR     D+  H E+   R+  R L
Sbjct: 141 FMRRAIELAREAAERGDNPFGSVLVHDGEIVMEDSNRVATEDDIRRHPELTLARLAVREL 200

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPK 106
             EI  E  +Y + EPC MCA  +  A   R+ Y  S P+
Sbjct: 201 DPEIRSETTMYTSTEPCPMCAGGMVYAGFDRVVYATSGPE 240


>gi|58268162|ref|XP_571237.1| tRNA specific adenosine deaminase [Cryptococcus neoformans var.
           neoformans JEC21]
 gi|134113420|ref|XP_774735.1| hypothetical protein CNBF4140 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|50257379|gb|EAL20088.1| hypothetical protein CNBF4140 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|57227472|gb|AAW43930.1| tRNA specific adenosine deaminase, putative [Cryptococcus
           neoformans var. neoformans JEC21]
          Length = 239

 Score = 70.5 bits (171), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 43/104 (41%), Positives = 58/104 (55%), Gaps = 5/104 (4%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  AL  A+ A   +E+PVG V V   + I+RA NR  E ++ T HAE+ AI     +L 
Sbjct: 1   MREALIMAEEALTNDEVPVGCVFVKGGQAIARARNRTNEWRNATLHAELEAID---HLLP 57

Query: 68  QEILP--EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109
               P   + LYVT+EPC MCA+A+    I R+ YG  N + GG
Sbjct: 58  SHPAPLSTITLYVTVEPCVMCASALRQVGIGRVVYGCGNDRFGG 101


>gi|282163607|ref|YP_003355992.1| putative deaminase [Methanocella paludicola SANAE]
 gi|282155921|dbj|BAI61009.1| putative deaminase [Methanocella paludicola SANAE]
          Length = 154

 Score = 70.1 bits (170), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 36/96 (37%), Positives = 51/96 (53%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  A+E+A+      ++P GA  V + K++  A N     K++TAHAEI  I   C + 
Sbjct: 6   YMRLAIEKAREGVRHGQLPFGACIVKDGKVVGCAHNTILRDKNLTAHAEINTIHEACHVF 65

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGA 102
               L    +Y T EPC MC  A+ LA I R+ YGA
Sbjct: 66  DSLDLSGCTIYCTCEPCPMCLGALGLANIDRIVYGA 101


>gi|320534251|ref|ZP_08034764.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Actinomyces sp. oral taxon 171 str. F0337]
 gi|320133534|gb|EFW25969.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Actinomyces sp. oral taxon 171 str. F0337]
          Length = 108

 Score = 70.1 bits (170), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 42/101 (41%), Positives = 54/101 (53%)

Query: 49  DVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGG 108
           D TAHAEI A+R     L    L    L VTLEPCTMCA AI LAR+ RL  GA  P+ G
Sbjct: 8   DPTAHAEIRALRAAGAALGDSHLDGCTLVVTLEPCTMCAGAIVLARVARLVLGAWEPRTG 67

Query: 109 GIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
              +          +H  E+  G+  Q+S+ ++  FF +RR
Sbjct: 68  ACGSVRDVVRDTRSNHQVEVRAGLRAQQSQDLLTAFFADRR 108


>gi|225020161|ref|ZP_03709353.1| hypothetical protein CORMATOL_00161 [Corynebacterium matruchotii
           ATCC 33806]
 gi|224947126|gb|EEG28335.1| hypothetical protein CORMATOL_00161 [Corynebacterium matruchotii
           ATCC 33806]
          Length = 158

 Score = 70.1 bits (170), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 45/130 (34%), Positives = 62/130 (47%), Gaps = 2/130 (1%)

Query: 22  NEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEI-LPEVDLYVT 79
            ++PVGAV    +  +I R  NR     D TAHAEI+AIR   R       L +  + VT
Sbjct: 29  GDVPVGAVIFDPDGNVIGRGSNRREADGDPTAHAEIIAIREAVRNFHDGWRLTDCTIAVT 88

Query: 80  LEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139
           LEPC MCA A+  ARI  + +GA  PK G   +           + P++  G+       
Sbjct: 89  LEPCCMCAGALVAARIGTIIFGAYEPKMGACGSVFDVVRDPQVLYQPQVIGGVLADECAA 148

Query: 140 IIQDFFKERR 149
            +  FF+E R
Sbjct: 149 QLGVFFQECR 158


>gi|307209295|gb|EFN86380.1| tRNA-specific adenosine deaminase 2 [Harpegnathos saltator]
          Length = 175

 Score = 70.1 bits (170), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 41/148 (27%), Positives = 75/148 (50%), Gaps = 12/148 (8%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  AL++A+ +    E+PVG + V NN+ I+   N   E  + T HAEI  I    R  
Sbjct: 6   WMDAALQKAEESLREGEVPVGCLFVYNNEAIATGNNTVNETCNATRHAEINCIDQVLRFC 65

Query: 67  SQE------ILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
            ++      +   +D+ VT+EPC MC +A+   R+R + YG +N + GG  +  +     
Sbjct: 66  KEKQLEHETVFRNLDVIVTVEPCIMCVSALLQLRVRSIVYGCANDRFGGCTSVLEVPNF- 124

Query: 121 TCHHSPEIY--PGISEQRSRQIIQDFFK 146
              + P+I     +    + +++++F+K
Sbjct: 125 ---YDPKITIQGNVKADEAMKLLKNFYK 149


>gi|332028253|gb|EGI68300.1| tRNA-specific adenosine deaminase 2 [Acromyrmex echinatior]
          Length = 175

 Score = 70.1 bits (170), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 42/147 (28%), Positives = 75/147 (51%), Gaps = 10/147 (6%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  AL++A+ +    E+PVG + + NN+II+   N   E  + T HAEI  I    +  
Sbjct: 6   WMDVALQKAEESLKAGEVPVGCLFIYNNQIIATGNNTVNETCNATRHAEINCIDQVLKFC 65

Query: 67  SQE------ILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
            ++      +   +D+ VT+EPC MC +A+   +I  + YG +N + GG         + 
Sbjct: 66  KEKSMDYEMVFRNLDVIVTVEPCIMCMSALLQLQIHSIVYGCANDRFGGC---ISVLEVP 122

Query: 121 TCHHSPEIYPG-ISEQRSRQIIQDFFK 146
             + S  I  G +  + + +++QDF+K
Sbjct: 123 KFYDSKIIIQGNVKGEEAMRLLQDFYK 149


>gi|312885336|ref|ZP_07745000.1| CMP/dCMP deaminase zinc-binding [Mucilaginibacter paludis DSM
           18603]
 gi|311302187|gb|EFQ79192.1| CMP/dCMP deaminase zinc-binding [Mucilaginibacter paludis DSM
           18603]
          Length = 148

 Score = 70.1 bits (170), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 44/123 (35%), Positives = 57/123 (46%), Gaps = 3/123 (2%)

Query: 25  PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84
           P GAV V +  +I+R+ NR     D TAHAE+ AIR+ C+ L    L    +Y + EPC 
Sbjct: 17  PFGAVIVKDGMVIARSANRVVPQNDPTAHAEVSAIRLACQELQSFSLEGCVIYTSCEPCP 76

Query: 85  MCAAAISLARIRRLYYGASNPKGGGIENGTQF-YTLATCHHSPEIYPGISEQRSRQIIQD 143
           MC  AI  ARI  +YY         I    +F Y    C  +    P +  Q  R   Q 
Sbjct: 77  MCLGAIYWARINEIYYANDKADAAAIGFDDKFIYEEMACSMADRKLPIV--QLMRDEAQG 134

Query: 144 FFK 146
            FK
Sbjct: 135 AFK 137


>gi|225055376|gb|ACN80662.1| Tsr4 [Streptomyces laurentii]
          Length = 142

 Score = 70.1 bits (170), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 44/128 (34%), Positives = 64/128 (50%), Gaps = 1/128 (0%)

Query: 22  NEIPVGAVAVLNNKIISRAGNRNRELK-DVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80
            ++PVGAV +  +  +   G+  RE   D TAHAE+LA+R       +  L    L VTL
Sbjct: 15  GDVPVGAVVLAPDGSVLATGHNEREATGDPTAHAEVLALRRAAAATGEWRLTGCTLVVTL 74

Query: 81  EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140
           EPC MCA A+  AR+ R+ +GA + K G   +          +H PE+  G+ E      
Sbjct: 75  EPCVMCAGALVQARVERVVFGAFDEKAGATGSLWDLVRDRRLNHRPEVIHGVLEAECSAQ 134

Query: 141 IQDFFKER 148
           +  FF+ R
Sbjct: 135 LTAFFRTR 142


>gi|199598355|ref|ZP_03211775.1| Cytosine/adenosine deaminase [Lactobacillus rhamnosus HN001]
 gi|199590808|gb|EDY98894.1| Cytosine/adenosine deaminase [Lactobacillus rhamnosus HN001]
          Length = 155

 Score = 70.1 bits (170), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 41/96 (42%), Positives = 54/96 (56%), Gaps = 1/96 (1%)

Query: 7   FMSCALEEAQ-NAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           FM+ A EEA+ N    +  P G V V N ++ISRA N+     D TAH EI AIR   + 
Sbjct: 6   FMAMADEEAKANVNGSDGGPFGCVIVKNGQVISRAHNQVLVDHDPTAHGEITAIRKAGQA 65

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
           L    L   +LY +  PC MC +AI  A I+++YYG
Sbjct: 66  LGTHDLSGCELYTSAMPCPMCLSAIIWANIKQVYYG 101


>gi|328463817|gb|EGF35361.1| guanine deaminase [Lactobacillus rhamnosus MTCC 5462]
          Length = 127

 Score = 70.1 bits (170), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 41/96 (42%), Positives = 54/96 (56%), Gaps = 1/96 (1%)

Query: 7   FMSCALEEAQ-NAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           FM+ A EEA+ N    +  P G V V N ++ISRA N+     D TAH EI AIR   + 
Sbjct: 6   FMAMANEEAKANVNGSDGGPFGCVIVKNGQVISRAHNQVLVDHDPTAHGEITAIRKAGQA 65

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
           L    L   +LY +  PC MC +AI  A I+++YYG
Sbjct: 66  LGTHDLSGCELYTSAMPCPMCLSAIIWANIKQVYYG 101


>gi|117925508|ref|YP_866125.1| CMP/dCMP deaminase, zinc-binding [Magnetococcus sp. MC-1]
 gi|117609264|gb|ABK44719.1| CMP/dCMP deaminase, zinc-binding protein [Magnetococcus sp. MC-1]
          Length = 150

 Score = 70.1 bits (170), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 50/144 (34%), Positives = 73/144 (50%), Gaps = 19/144 (13%)

Query: 12  LEEAQNAALRNEIPVGA-VAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEI 70
           L +A +AA R E+PVGA +      ++S AGN      D  AHAEI+A+R   R LS   
Sbjct: 20  LVQATDAAARGEVPVGALIYAAQGWVVSMAGNGPIGAHDPMAHAEIVAMRCAARRLSNYR 79

Query: 71  LPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYP 130
           L  + + V+LEPC +C  A  LAR++ + Y  +     G ENG            P+I P
Sbjct: 80  LSGLCMVVSLEPCPVCQQATGLARLQSVRYLTAQ----GAENG---------FVRPDITP 126

Query: 131 GISEQRS-----RQIIQDFFKERR 149
            + E R+       +++ FF+ RR
Sbjct: 127 PLQEDRAFMTAGEMMLKIFFEFRR 150


>gi|261855466|ref|YP_003262749.1| Guanine deaminase [Halothiobacillus neapolitanus c2]
 gi|261835935|gb|ACX95702.1| Guanine deaminase [Halothiobacillus neapolitanus c2]
          Length = 163

 Score = 69.7 bits (169), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 34/86 (39%), Positives = 48/86 (55%)

Query: 25  PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84
           P GAV   N ++I+   N+     D TAHAE+ AIR  C++L+   L   ++Y + EPC 
Sbjct: 32  PFGAVISRNGEVIATGFNQVTSANDPTAHAEVSAIRAACQVLNTFDLSGCEIYTSCEPCP 91

Query: 85  MCAAAISLARIRRLYYGASNPKGGGI 110
           MC +AI  AR+ R+YY  S      I
Sbjct: 92  MCLSAIYWARLDRIYYANSRQDAADI 117


>gi|307170830|gb|EFN62941.1| tRNA-specific adenosine deaminase 2 [Camponotus floridanus]
          Length = 171

 Score = 69.7 bits (169), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 42/151 (27%), Positives = 79/151 (52%), Gaps = 18/151 (11%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  AL++A+ +    E+PVG + + NN+II+   N   E  + T HAEI  I    +  
Sbjct: 6   WMDVALQKAEESLRAGEVPVGCLFIYNNEIIATGNNTVNETCNATRHAEINCIDQVLKFC 65

Query: 67  SQEILP------EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG---IENGTQFY 117
            ++ L        +D+ VT+EPC MC +A+   ++  + YG +N + GG   +    +FY
Sbjct: 66  KEKCLQYETVFRNLDVVVTVEPCIMCISALLQLQVHSIIYGCANDRFGGCVSVLEVPKFY 125

Query: 118 TLATCHHSPE--IYPGISEQRSRQIIQDFFK 146
                   P+  I   + ++++ ++++DF+K
Sbjct: 126 -------DPKVLIQGNVKKEQAMKLLKDFYK 149


>gi|321260564|ref|XP_003195002.1| tRNA specific adenosine deaminase [Cryptococcus gattii WM276]
 gi|317461474|gb|ADV23215.1| tRNA specific adenosine deaminase, putative [Cryptococcus gattii
           WM276]
          Length = 239

 Score = 69.7 bits (169), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 43/104 (41%), Positives = 58/104 (55%), Gaps = 5/104 (4%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  AL  A+ A   +E+PVG V V   + I+RA NR  E ++ T HAE+ AI     +L 
Sbjct: 1   MREALIMAEEALSNDEVPVGCVFVKGGQAIARARNRTNEWRNATLHAELEAID---HLLP 57

Query: 68  QEILP--EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109
               P   + LYVT+EPC MCA+A+    I R+ YG  N + GG
Sbjct: 58  SHPAPLSTITLYVTVEPCVMCASALRQVGIGRVVYGCGNDRFGG 101


>gi|307108051|gb|EFN56292.1| hypothetical protein CHLNCDRAFT_144679 [Chlorella variabilis]
          Length = 250

 Score = 69.7 bits (169), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 40/104 (38%), Positives = 55/104 (52%), Gaps = 6/104 (5%)

Query: 22  NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI----RMGCRILSQEILPEVDLY 77
           NE+PVG V V +  +++   N+  E ++ T HAE +A+    +      +    PE  LY
Sbjct: 29  NEVPVGCVVVRDGAVVAAGSNKTNETRNGTRHAEFVAVDALLQQAGGDAAAARFPECHLY 88

Query: 78  VTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
           VT EPC MCA A+SL R   + YG  N K GG  NG+     AT
Sbjct: 89  VTCEPCIMCAGALSLLRFASVTYGCPNDKFGG--NGSILSVHAT 130


>gi|195143831|ref|XP_002012900.1| GL23678 [Drosophila persimilis]
 gi|194101843|gb|EDW23886.1| GL23678 [Drosophila persimilis]
          Length = 160

 Score = 69.7 bits (169), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 44/146 (30%), Positives = 76/146 (52%), Gaps = 9/146 (6%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEIL---AIRMGC 63
           FM  AL EA+ A    E+PVG V V  +K+++R  N     ++ T HAE +   AI   C
Sbjct: 4   FMEEALMEARRARDAGEVPVGCVFVHEDKVVARGANEVNVSRNATRHAEFICIDAILAYC 63

Query: 64  R---ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
           R   + ++++  E+ + VT+EPC MC+AA+    ++ + +G  N + GG    T     A
Sbjct: 64  REKNLPARQMFSEIIVVVTVEPCIMCSAALHTLGVQEIIFGCENDRFGG---KTVVNVGA 120

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFK 146
                 +I  G+    +  ++++F+K
Sbjct: 121 VVGKKIKITGGVRGDEAMALLKEFYK 146


>gi|167041893|gb|ABZ06633.1| putative cytidine and deoxycytidylate deaminase zinc-binding region
           [uncultured marine microorganism HF4000_133G03]
          Length = 149

 Score = 69.7 bits (169), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 35/87 (40%), Positives = 48/87 (55%)

Query: 25  PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84
           P G+V V + KII+   N+     D TAH EI+AIR  C+ L+   L   +LY T EPC 
Sbjct: 18  PFGSVIVKDEKIIAEGFNKVTSTNDPTAHGEIVAIRKACKSLNNFNLSGCELYSTCEPCP 77

Query: 85  MCAAAISLARIRRLYYGASNPKGGGIE 111
           MC +AI  A I ++YY  +      I+
Sbjct: 78  MCLSAIYWAHIDKVYYANTRDDAKKID 104


>gi|198451012|ref|XP_001358211.2| GA18791 [Drosophila pseudoobscura pseudoobscura]
 gi|198131295|gb|EAL27348.2| GA18791 [Drosophila pseudoobscura pseudoobscura]
          Length = 160

 Score = 69.7 bits (169), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 44/146 (30%), Positives = 76/146 (52%), Gaps = 9/146 (6%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEIL---AIRMGC 63
           FM  AL EA+ A    E+PVG V V  +K+++R  N     ++ T HAE +   AI   C
Sbjct: 4   FMEEALMEARRARDAGEVPVGCVFVHEDKVVARGANEVNVSRNATRHAEFICIDAILAYC 63

Query: 64  R---ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
           R   + ++++  E+ + VT+EPC MC+AA+    ++ + +G  N + GG    T     A
Sbjct: 64  REKNLPARQMFSEIIVVVTVEPCIMCSAALHTLGVQEIIFGCENDRFGG---KTVVNVGA 120

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFK 146
                 +I  G+    +  ++++F+K
Sbjct: 121 VVGKKIKITGGVRGDEAMALLKEFYK 146


>gi|188994253|ref|YP_001928505.1| putative cytidine/deoxycytidylate deaminase [Porphyromonas
           gingivalis ATCC 33277]
 gi|188593933|dbj|BAG32908.1| putative cytidine/deoxycytidylate deaminase [Porphyromonas
           gingivalis ATCC 33277]
          Length = 159

 Score = 69.7 bits (169), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 37/92 (40%), Positives = 47/92 (51%)

Query: 25  PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84
           P GAV V + +II+   NR     D TAHAE+  IRM C+ L    L    +Y + EPC 
Sbjct: 28  PFGAVIVKDGEIIAATSNRVTLDNDPTAHAEVNCIRMACKRLGTFDLSGCTIYTSCEPCP 87

Query: 85  MCAAAISLARIRRLYYGASNPKGGGIENGTQF 116
           MC  AI  ARI R++YG +      I     F
Sbjct: 88  MCLGAIYWARIDRIFYGNNRQDAADIGFDDDF 119


>gi|47207020|emb|CAF91477.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 161

 Score = 69.3 bits (168), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 39/108 (36%), Positives = 59/108 (54%), Gaps = 6/108 (5%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR------M 61
           M  A + A++A    E+PVG + V NN+++ R  N   E K+ T HAE++A+        
Sbjct: 1   MDEAFDMAKDALQNGEVPVGCLMVYNNEVVGRGRNEVNETKNATRHAEMVALDELLNWCH 60

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109
              +   ++  +  LYVT+EPC MCAAA+ L  I  + YG  N + GG
Sbjct: 61  HSNLDVSKVSRKTVLYVTVEPCVMCAAALRLLNIALVVYGCRNERFGG 108


>gi|262372745|ref|ZP_06066024.1| guanine deaminase (Guanase) (guanine aminase) (guanine
           aminohydrolase) (GAH) (GDEase) [Acinetobacter junii
           SH205]
 gi|262312770|gb|EEY93855.1| guanine deaminase (Guanase) (guanine aminase) (guanine
           aminohydrolase) (GAH) (GDEase) [Acinetobacter junii
           SH205]
          Length = 151

 Score = 69.3 bits (168), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 38/98 (38%), Positives = 57/98 (58%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           F+  A++ A     R   P  A+ V NN+IIS   N+ +   D TAHAE+LA+R   R+L
Sbjct: 6   FIQQAVDLALENVKRGGRPFAALVVKNNEIISTGVNQIKLTNDPTAHAELLALREAGRLL 65

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASN 104
           S   L +  +Y + +PC MC AAI +A I ++++  SN
Sbjct: 66  STPNLEDCTVYASGQPCPMCLAAIRMAGISKVFFAFSN 103


>gi|227355507|ref|ZP_03839902.1| guanine deaminase [Proteus mirabilis ATCC 29906]
 gi|227164303|gb|EEI49192.1| guanine deaminase [Proteus mirabilis ATCC 29906]
          Length = 153

 Score = 69.3 bits (168), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 39/118 (33%), Positives = 64/118 (54%), Gaps = 7/118 (5%)

Query: 25  PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84
           P GAV V N ++I+ A N+     D TAHAE+LA+R   ++L +  L +  +Y + +PC 
Sbjct: 24  PFGAVIVKNGQVIAHAVNQITATNDPTAHAELLALREAGKVLGRAKLDDCVVYASGQPCP 83

Query: 85  MCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQ 142
           MC AA+ +A I +++Y  SN       +  Q Y L+T + +  +     +Q   Q +Q
Sbjct: 84  MCLAAMRMAGISQIFYAYSN-------DDAQPYGLSTANIAKALRVAPEQQEGLQFVQ 134


>gi|171909718|ref|ZP_02925188.1| CMP/dCMP deaminase, zinc-binding protein [Verrucomicrobium spinosum
           DSM 4136]
          Length = 169

 Score = 69.3 bits (168), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 37/100 (37%), Positives = 55/100 (55%), Gaps = 4/100 (4%)

Query: 12  LEEAQNAALRNEI----PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           L+EA + A+ N      P GAV V   ++ISR  N      D TAHAE+LA+R   ++L 
Sbjct: 17  LQEAIDLAVANISEGGRPFGAVVVKYGRVISRGVNETHLSNDPTAHAEMLAVRAASQVLQ 76

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKG 107
             +L    LY +  PC MC AA+ +A +  ++Y  +NP+ 
Sbjct: 77  SPLLESCTLYASGHPCPMCLAAMRMAGVTDVFYAFTNPEA 116


>gi|170032967|ref|XP_001844351.1| tRNA-specific adenosine deaminase subunit TAD2 [Culex
           quinquefasciatus]
 gi|167873308|gb|EDS36691.1| tRNA-specific adenosine deaminase subunit TAD2 [Culex
           quinquefasciatus]
          Length = 165

 Score = 69.3 bits (168), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 50/147 (34%), Positives = 72/147 (48%), Gaps = 7/147 (4%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           FM  ALE+A+ A    E+PVG V V   ++II+   NR  E K+ T H E L I      
Sbjct: 4   FMEQALEQARLAEQLKEVPVGCVFVRGQDEIIANGCNRVNETKNATRHVEFLCIDQSLEY 63

Query: 66  LSQEILPEVDLY------VTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
             Q  +P  DL+      VT+EPC MCA A+    +R + YG  N + GG         L
Sbjct: 64  ARQRDIPWEDLFREVTVVVTVEPCIMCAGALLQLGVREIIYGCGNDRFGGCGTVLDVPGL 123

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFK 146
                S  I  G+  + + Q++++F+K
Sbjct: 124 LLEKGSLPIRGGVRAEEAMQLLREFYK 150


>gi|237784829|ref|YP_002905534.1| putative cytosine/adenosine deaminase [Corynebacterium
           kroppenstedtii DSM 44385]
 gi|237757741|gb|ACR16991.1| putative cytosine/adenosine deaminase [Corynebacterium
           kroppenstedtii DSM 44385]
          Length = 163

 Score = 69.3 bits (168), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 46/146 (31%), Positives = 72/146 (49%), Gaps = 4/146 (2%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           +M  AL+ A+      ++PVGAV V  +  ++    N      D TAHAE++A+R   R 
Sbjct: 18  WMQMALDVAKRTP-PGDVPVGAVVVDASGHVVGEGCNERESTGDPTAHAEVIALRAAARE 76

Query: 66  LSQEI-LPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFY-TLATCH 123
           +     L    L VTLEPC MCA A   +RI  + +GA  PK G   +        A   
Sbjct: 77  VGDGWRLENHTLVVTLEPCVMCAGAAVTSRIGGIIFGAYEPKTGACGSVIDVVRDPAWPF 136

Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149
            + ++  G+ E+  + ++++FF  RR
Sbjct: 137 PTVDVRGGVLERECQDLVEEFFARRR 162


>gi|34541357|ref|NP_905836.1| cytidine/deoxycytidylate deaminase family protein [Porphyromonas
           gingivalis W83]
 gi|34397674|gb|AAQ66735.1| cytidine/deoxycytidylate deaminase family protein [Porphyromonas
           gingivalis W83]
          Length = 150

 Score = 69.3 bits (168), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 37/92 (40%), Positives = 47/92 (51%)

Query: 25  PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84
           P GAV V + +II+   NR     D TAHAE+  IRM C+ L    L    +Y + EPC 
Sbjct: 19  PFGAVIVKDGEIIAATSNRVTLDNDPTAHAEVNCIRMACKRLGTFDLSGCTIYTSCEPCP 78

Query: 85  MCAAAISLARIRRLYYGASNPKGGGIENGTQF 116
           MC  AI  ARI R++YG +      I     F
Sbjct: 79  MCLGAIYWARIDRIFYGNNRQDAADIGFDDDF 110


>gi|119026595|ref|YP_910440.1| cytidine and deoxycytidylate deaminase [Bifidobacterium
           adolescentis ATCC 15703]
 gi|118766179|dbj|BAF40358.1| possible cytidine and deoxycytidylate deaminase [Bifidobacterium
           adolescentis ATCC 15703]
          Length = 157

 Score = 69.3 bits (168), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 43/129 (33%), Positives = 60/129 (46%), Gaps = 1/129 (0%)

Query: 22  NEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80
            E+PVGAV +  + ++I R  N      D  AHAE+ A+      L    L +  L VTL
Sbjct: 29  GEVPVGAVVLAADGRVIGRGRNLRETHADPLAHAEVKAMAEAAASLDTWNLADCTLVVTL 88

Query: 81  EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140
           EPC MCA A     I R+ +GA + K G   +             PE+  G+ E    ++
Sbjct: 89  EPCPMCAGACLQTHIGRIVFGAWDAKLGACGSVWDIPRDPHVGLVPEVIGGVREAECGRL 148

Query: 141 IQDFFKERR 149
           + DFF  RR
Sbjct: 149 MTDFFARRR 157


>gi|322783203|gb|EFZ10789.1| hypothetical protein SINV_01360 [Solenopsis invicta]
          Length = 175

 Score = 69.3 bits (168), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 40/148 (27%), Positives = 77/148 (52%), Gaps = 12/148 (8%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC--- 63
           +M+ AL++A+ +    E+PVG + + NN++I+   N   E  + T HAEI  I       
Sbjct: 6   WMNVALQKAEESLRAGEVPVGCLFIYNNEVIATGNNTVNETCNATRHAEINCIDQVLKFC 65

Query: 64  ---RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              R+  + +   +D+ VT+EPC MC +A+   ++  + YG +N + GG  +  +     
Sbjct: 66  KEKRVDYETVFRNLDVIVTVEPCIMCMSALLQLQVHSIVYGCANDRFGGCGSVLEVQKF- 124

Query: 121 TCHHSPEIY--PGISEQRSRQIIQDFFK 146
              + P+I     +  + + +++QDF+K
Sbjct: 125 ---YDPKIVIQGNVKGEEAMRLLQDFYK 149


>gi|312887290|ref|ZP_07746893.1| Guanine deaminase [Mucilaginibacter paludis DSM 18603]
 gi|311300248|gb|EFQ77314.1| Guanine deaminase [Mucilaginibacter paludis DSM 18603]
          Length = 170

 Score = 69.3 bits (168), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 34/77 (44%), Positives = 44/77 (57%)

Query: 25  PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84
           P GA+ V N K+I+  GN      D TAHAE+ AIR  C+ L    L    +Y + EPC 
Sbjct: 32  PFGAIIVKNGKVIACEGNTVTSSNDPTAHAEVNAIRAACQALKSPDLEGCIMYTSCEPCP 91

Query: 85  MCAAAISLARIRRLYYG 101
           MC +AI  A+I  +YYG
Sbjct: 92  MCTSAIYWAQINVVYYG 108


>gi|187924315|ref|YP_001895957.1| CMP/dCMP deaminase zinc-binding [Burkholderia phytofirmans PsJN]
 gi|187715509|gb|ACD16733.1| CMP/dCMP deaminase zinc-binding [Burkholderia phytofirmans PsJN]
          Length = 171

 Score = 69.3 bits (168), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 44/122 (36%), Positives = 64/122 (52%)

Query: 24  IPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83
           +PVGAV V   ++I+   N      D +AHAE+ A+R   + +    LP  +LYVTLEPC
Sbjct: 17  VPVGAVLVRGEEVIATGFNHPIGGHDPSAHAEMAALRAAAQAVENYRLPGCELYVTLEPC 76

Query: 84  TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQD 143
            MCA AI  ARI R+ +GA +PK G   +    +     +H   +  G+ E      ++ 
Sbjct: 77  LMCAGAIMHARIARVVFGARDPKTGACGSVVDAFANPQLNHHTTVIGGVLENECGAALKS 136

Query: 144 FF 145
           FF
Sbjct: 137 FF 138


>gi|256826363|ref|YP_003150323.1| tRNA-adenosine deaminase [Kytococcus sedentarius DSM 20547]
 gi|256689756|gb|ACV07558.1| tRNA-adenosine deaminase [Kytococcus sedentarius DSM 20547]
          Length = 159

 Score = 69.3 bits (168), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 47/144 (32%), Positives = 71/144 (49%), Gaps = 1/144 (0%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           ++  AL   + A    ++PVGAV +    ++I R  NR     D  AHAE++A+R    +
Sbjct: 15  WIGHALRAGEQALAAGDVPVGAVVIGPGGQVIGRGWNRREAEGDPLAHAEVVAMRAAAAV 74

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
                L +  L VTLEPC MCA AI  ARI  + +GA + K G   +       +   H 
Sbjct: 75  RGGWRLEDCALAVTLEPCLMCAGAIGQARIPLVVFGAWDAKAGACGSVWDVLRDSAALHR 134

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
            E+  G+ ++   + + DFF  RR
Sbjct: 135 AEVRGGVRQEDCGRTLGDFFVTRR 158


>gi|193076995|gb|ABO11743.2| CMP/dCMP deaminase zinc-binding [Acinetobacter baumannii ATCC
           17978]
          Length = 160

 Score = 69.3 bits (168), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 40/107 (37%), Positives = 57/107 (53%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           MK    F+  A+E A N   +   P GAV V + K+I+   N+     D TAHAE+LAIR
Sbjct: 1   MKANQEFLRQAIELAYNNIEKGGRPFGAVIVKDGKVIASGVNQILTTNDPTAHAELLAIR 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKG 107
           +  ++L    L    ++ +  PC MC AA+ LA I+ + Y  SN  G
Sbjct: 61  VASQVLGTANLEGCSVFASGHPCPMCMAAMRLAGIKTVNYAYSNEDG 107


>gi|303276308|ref|XP_003057448.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226461800|gb|EEH59093.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 189

 Score = 68.9 bits (167), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 45/136 (33%), Positives = 67/136 (49%), Gaps = 11/136 (8%)

Query: 21  RNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI----RMGCRILSQEILPEVDL 76
           R E+PVG V VL+N+I++R  NR  E ++ T HAE  AI           +     +  L
Sbjct: 25  RWEVPVGCVLVLDNEIVARGSNRTNERRNGTRHAEFEAIDALLAAHANDANAARFEDCVL 84

Query: 77  YVTLEPCTMCAAAISLARIRRLYYGASNPKGGG----IENGTQFYTLATCHHSPEIYP-- 130
           YVT EPC MCA A+SL   R + YG  N K GG    + +G           +   YP  
Sbjct: 85  YVTCEPCIMCAGALSLLGCRAVVYGCGNDKFGGNGSILSDGGDAAASNGARGARRTYPSV 144

Query: 131 -GISEQRSRQIIQDFF 145
            G+  + + ++++ F+
Sbjct: 145 GGLFAEDAVELLRRFY 160


>gi|259506366|ref|ZP_05749268.1| guanine deaminase [Corynebacterium efficiens YS-314]
 gi|259166044|gb|EEW50598.1| guanine deaminase [Corynebacterium efficiens YS-314]
          Length = 155

 Score = 68.9 bits (167), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 41/127 (32%), Positives = 67/127 (52%), Gaps = 7/127 (5%)

Query: 25  PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84
           P GAV    ++II+ A N     KD T HAEI+AIR   R+L    L   +LYV  +PC 
Sbjct: 24  PFGAVIARGDRIIAEAYNTVLATKDPTNHAEIVAIRSAARVLGTVDLTGCELYVNAQPCP 83

Query: 85  MCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT-CHHSPEI----YPGISEQRSRQ 139
           MCA A+  AR+ R+Y+  +  +   I  G     + T  + +P+     +  + ++R+R+
Sbjct: 84  MCAGAVYWARLERVYFANTAAESARI--GFDDVRIDTELNRNPQDRGIPFEHVPDRRARE 141

Query: 140 IIQDFFK 146
           +  D+ +
Sbjct: 142 VFDDWLR 148


>gi|83814096|ref|YP_445447.1| cytidine deaminase [Salinibacter ruber DSM 13855]
 gi|83755490|gb|ABC43603.1| probable cytidine deaminase [Salinibacter ruber DSM 13855]
          Length = 237

 Score = 68.9 bits (167), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 40/99 (40%), Positives = 50/99 (50%), Gaps = 1/99 (1%)

Query: 7   FMSCALEEA-QNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           F+  A+E A QN       P  A+ V + +I+ R  N    L D TAHAE+ AIR  C  
Sbjct: 87  FLREAIEMAVQNVTTGQGGPFAALVVRDGEIVGRGTNVVTTLNDPTAHAEVTAIRRACDA 146

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASN 104
           L    L    LY T EPC MC  A   AR+ R+YY A+ 
Sbjct: 147 LDDFELAGCTLYATCEPCPMCLGAAYWARLDRVYYAATQ 185


>gi|25027973|ref|NP_738027.1| hypothetical protein CE1417 [Corynebacterium efficiens YS-314]
 gi|23493256|dbj|BAC18227.1| conserved hypothetical protein [Corynebacterium efficiens YS-314]
          Length = 157

 Score = 68.9 bits (167), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 41/127 (32%), Positives = 67/127 (52%), Gaps = 7/127 (5%)

Query: 25  PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84
           P GAV    ++II+ A N     KD T HAEI+AIR   R+L    L   +LYV  +PC 
Sbjct: 26  PFGAVIARGDRIIAEAYNTVLATKDPTNHAEIVAIRSAARVLGTVDLTGCELYVNAQPCP 85

Query: 85  MCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT-CHHSPEI----YPGISEQRSRQ 139
           MCA A+  AR+ R+Y+  +  +   I  G     + T  + +P+     +  + ++R+R+
Sbjct: 86  MCAGAVYWARLERVYFANTAAESARI--GFDDVRIDTELNRNPQDRGIPFEHVPDRRARE 143

Query: 140 IIQDFFK 146
           +  D+ +
Sbjct: 144 VFDDWLR 150


>gi|224125580|ref|XP_002319621.1| predicted protein [Populus trichocarpa]
 gi|222857997|gb|EEE95544.1| predicted protein [Populus trichocarpa]
          Length = 186

 Score = 68.9 bits (167), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 37/95 (38%), Positives = 57/95 (60%), Gaps = 1/95 (1%)

Query: 7   FMSCALEEA-QNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           F+S A+EEA +     +  P GAV V N++++    N   +  D TAHAE+  IR  C+ 
Sbjct: 34  FLSRAVEEAYKGVECGDGGPFGAVVVRNDEVVMSCHNMVLKNTDPTAHAEVTVIREACKK 93

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
           L++  L + ++Y + EPC MC  AI L+R++RL Y
Sbjct: 94  LNRIELSDCEIYASCEPCPMCFGAIHLSRLKRLVY 128


>gi|294507332|ref|YP_003571390.1| cytidine deaminase [Salinibacter ruber M8]
 gi|294343661|emb|CBH24439.1| Probable cytidine deaminase [Salinibacter ruber M8]
          Length = 237

 Score = 68.9 bits (167), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 40/99 (40%), Positives = 50/99 (50%), Gaps = 1/99 (1%)

Query: 7   FMSCALEEA-QNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           F+  A+E A QN       P  A+ V + +I+ R  N    L D TAHAE+ AIR  C  
Sbjct: 87  FLREAIEMAVQNVTTGQGGPFAALVVRDGEIVGRGTNVVTTLNDPTAHAEVTAIRRACDA 146

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASN 104
           L    L    LY T EPC MC  A   AR+ R+YY A+ 
Sbjct: 147 LDDFELAGCTLYATCEPCPMCLGAAYWARLDRVYYAATQ 185


>gi|255631480|gb|ACU16107.1| unknown [Glycine max]
          Length = 156

 Score = 68.9 bits (167), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 33/75 (44%), Positives = 47/75 (62%)

Query: 28  AVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCA 87
           A+ V N++I++R  N      D TAHAE+  IR  C  L+Q  L + ++Y + EPC MC 
Sbjct: 26  AIIVCNDEIVARCHNMVLRNTDPTAHAEVTVIRKACEKLNQIELSDCEIYASCEPCPMCF 85

Query: 88  AAISLARIRRLYYGA 102
            AI L+R++RL YGA
Sbjct: 86  GAIHLSRVKRLVYGA 100


>gi|126653720|ref|ZP_01725638.1| cytidine/deoxycytidylate deaminase family protein; probable guanine
           deaminase [Bacillus sp. B14905]
 gi|126589684|gb|EAZ83820.1| cytidine/deoxycytidylate deaminase family protein; probable guanine
           deaminase [Bacillus sp. B14905]
          Length = 132

 Score = 68.9 bits (167), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 42/100 (42%), Positives = 56/100 (56%), Gaps = 2/100 (2%)

Query: 7   FMSCALEEA-QNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           FM  AL+ A +NA   +  P GA+ V N +IIS   N   +  D+T HAEI AIR  C  
Sbjct: 6   FMRKALDLANENALSEHGAPFGALVVKNGQIISSGVNEVAKTNDLTNHAEIQAIRQACHT 65

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY-GASN 104
           L    L   ++Y + EPC MC +AI  A++  +YY  ASN
Sbjct: 66  LQTINLEGCEMYASTEPCPMCLSAIYYAKLTTVYYFHASN 105


>gi|326800631|ref|YP_004318450.1| Guanine deaminase [Sphingobacterium sp. 21]
 gi|326551395|gb|ADZ79780.1| Guanine deaminase [Sphingobacterium sp. 21]
          Length = 160

 Score = 68.9 bits (167), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 39/103 (37%), Positives = 55/103 (53%), Gaps = 1/103 (0%)

Query: 2   KKGNVFMSCALEEAQNAALRNEI-PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           K   +F+  A++ A     +N+  P G + V + KII +  N      D TAHAEI+AIR
Sbjct: 5   KDDIIFLKKAIDLAVTGVKQNKGGPFGCIIVKDGKIIGKGCNSVTSTIDPTAHAEIVAIR 64

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
             C+ L +  L +  LY + EPC MC  AI  AR  R+ Y A+
Sbjct: 65  DACKHLGEYQLDDCTLYASCEPCPMCLGAIYWARPSRVVYAAT 107


>gi|308177840|ref|YP_003917246.1| nucleoside deaminase-like protein [Arthrobacter arilaitensis Re117]
 gi|307745303|emb|CBT76275.1| nucleoside deaminase-like protein [Arthrobacter arilaitensis Re117]
          Length = 156

 Score = 68.9 bits (167), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 37/92 (40%), Positives = 48/92 (52%)

Query: 25  PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84
           P GAV VL  K+IS A N      D TAHAEI AIR   ++L    L E +LY + EPC 
Sbjct: 25  PFGAVVVLEGKVISAACNSVVGSMDPTAHAEINAIRAAGQVLGSFDLSECELYTSCEPCP 84

Query: 85  MCAAAISLARIRRLYYGASNPKGGGIENGTQF 116
           MC  AI  +R + +Y+  +  +   I     F
Sbjct: 85  MCLGAIYWSRFKHVYFANNREEAAAIGFDDDF 116


>gi|220906868|ref|YP_002482179.1| CMP/dCMP deaminase [Cyanothece sp. PCC 7425]
 gi|219863479|gb|ACL43818.1| CMP/dCMP deaminase zinc-binding [Cyanothece sp. PCC 7425]
          Length = 150

 Score = 68.9 bits (167), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 47/139 (33%), Positives = 74/139 (53%), Gaps = 8/139 (5%)

Query: 12  LEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEI- 70
           LE A++A  + +  V A+ +  ++I++   N+  +  D+TAHAE++ +R     LSQ   
Sbjct: 6   LELARSAIAQGKAGVAALMLWRDEILAFDHNQAVDTGDLTAHAEMVVLRQASSRLSQMSD 65

Query: 71  --LPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGG---GIENGTQFYTL-ATCHH 124
               E+ LYVTLEPC MC +AIS A I+R+ Y A N  G     I +G     +  T   
Sbjct: 66  AEKAEITLYVTLEPCLMCLSAISFAGIKRVVYSALNRDGKPEIWISDGITTEEINETLVR 125

Query: 125 SP-EIYPGISEQRSRQIIQ 142
            P E+ PG+  +  + I+ 
Sbjct: 126 GPLELVPGVKREEGQAILD 144


>gi|38232870|ref|NP_938637.1| putative cytosine deaminase [Corynebacterium diphtheriae NCTC
           13129]
 gi|38199128|emb|CAE48752.1| Putative cytosine deaminase [Corynebacterium diphtheriae]
          Length = 147

 Score = 68.6 bits (166), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 43/129 (33%), Positives = 62/129 (48%), Gaps = 2/129 (1%)

Query: 23  EIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEI-LPEVDLYVTL 80
           +IPVGA+    +  I+ R  NR     +   HAEI+AI   C        L +  L VTL
Sbjct: 16  DIPVGAIIYGPDGTILGRGTNRRETDHNPLGHAEIMAITQACTQRGDGWRLTDCTLAVTL 75

Query: 81  EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140
           EPCTMCA A+  +RI  + +GA  PK G   +           H+ ++  GI E    ++
Sbjct: 76  EPCTMCAGALVGSRIGHIIFGAYEPKTGACGSAFDVVRDPAVLHTVQVRGGILEAECAEL 135

Query: 141 IQDFFKERR 149
           + +FF   R
Sbjct: 136 MTNFFGGLR 144


>gi|169796435|ref|YP_001714228.1| guanine deaminase (Guanase) (guanine aminase) (guanine
           aminohydrolase) (GAH) (GDEase) [Acinetobacter baumannii
           AYE]
 gi|213156454|ref|YP_002318874.1| guanine deaminase [Acinetobacter baumannii AB0057]
 gi|215483897|ref|YP_002326122.1| Guanine deaminase(Guanase) [Acinetobacter baumannii AB307-0294]
 gi|301347084|ref|ZP_07227825.1| Guanine deaminase(Guanase) [Acinetobacter baumannii AB056]
 gi|301512279|ref|ZP_07237516.1| Guanine deaminase(Guanase) [Acinetobacter baumannii AB058]
 gi|301596132|ref|ZP_07241140.1| Guanine deaminase(Guanase) [Acinetobacter baumannii AB059]
 gi|332854738|ref|ZP_08435516.1| putative guanine deaminase [Acinetobacter baumannii 6013150]
 gi|332865718|ref|ZP_08436528.1| putative guanine deaminase [Acinetobacter baumannii 6013113]
 gi|169149362|emb|CAM87246.1| Guanine deaminase (Guanase) (Guanine aminase) (Guanine
           aminohydrolase) (GAH) (GDEase) [Acinetobacter baumannii
           AYE]
 gi|213055614|gb|ACJ40516.1| guanine deaminase [Acinetobacter baumannii AB0057]
 gi|213986575|gb|ACJ56874.1| Guanine deaminase(Guanase) [Acinetobacter baumannii AB307-0294]
 gi|332727824|gb|EGJ59227.1| putative guanine deaminase [Acinetobacter baumannii 6013150]
 gi|332735145|gb|EGJ66227.1| putative guanine deaminase [Acinetobacter baumannii 6013113]
          Length = 160

 Score = 68.6 bits (166), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 40/107 (37%), Positives = 56/107 (52%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           MK    F+  A+E A N   +   P GAV V + K+I+   N+     D TAHAE+LAIR
Sbjct: 1   MKANQEFLRQAIELAYNNIEKGGRPFGAVIVKDGKVIASGVNQILTTNDPTAHAELLAIR 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKG 107
              ++L    L    ++ +  PC MC AA+ LA I+ + Y  SN  G
Sbjct: 61  TASQVLGTANLEGCSVFASGHPCPMCMAAMRLAGIKTVNYAYSNEDG 107


>gi|68537118|ref|YP_251823.1| putative cytosine/adenosine deaminase [Corynebacterium jeikeium
           K411]
 gi|68264717|emb|CAI38205.1| putative cytosine/adenosine deaminase [Corynebacterium jeikeium
           K411]
          Length = 142

 Score = 68.6 bits (166), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 45/130 (34%), Positives = 66/130 (50%), Gaps = 3/130 (2%)

Query: 22  NEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEI-LPEVDLYVT 79
            ++PVGAV +  + + + R  NR     D TAHAEILAIR   + L     L +  L VT
Sbjct: 14  GDVPVGAVILGPDGRELGRGVNRREADNDPTAHAEILAIREAVQELGDAWRLEDCTLVVT 73

Query: 80  LEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139
           LEPC MCA A+  ARI  + +GA  P+ G   +       +  H + E+  G+      +
Sbjct: 74  LEPCAMCAGALVGARIGSIIFGAYEPRTGACGSVWDVPRESPLHWA-EVRGGVLAGECEE 132

Query: 140 IIQDFFKERR 149
           +++ FF   R
Sbjct: 133 LLRQFFARLR 142


>gi|328857268|gb|EGG06385.1| hypothetical protein MELLADRAFT_86571 [Melampsora larici-populina
           98AG31]
          Length = 171

 Score = 68.6 bits (166), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 41/111 (36%), Positives = 64/111 (57%), Gaps = 12/111 (10%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           MS A++ A+ A   NEIPVG V +  L+ K+IS+  NR  E ++ + HAE  A+     +
Sbjct: 1   MSEAIKMAEEAFSANEIPVGCVFINELDGKLISKGRNRTNETRNASLHAEFDALS---SL 57

Query: 66  LSQEILPEVD-------LYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109
           L     P +        LYVT+EPC MC++A+    I+++++G SN + GG
Sbjct: 58  LPNPKNPNLKTDFKNLTLYVTVEPCLMCSSALRQIGIKKVFFGCSNDRFGG 108


>gi|241617471|ref|XP_002406922.1| tRNA-specific adenosine deaminase, putative [Ixodes scapularis]
 gi|215500893|gb|EEC10387.1| tRNA-specific adenosine deaminase, putative [Ixodes scapularis]
          Length = 188

 Score = 68.6 bits (166), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 39/144 (27%), Positives = 71/144 (49%), Gaps = 8/144 (5%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M    + A+ A    E+PVG V     ++I+R  NR  + K+   HAE+  +       +
Sbjct: 25  MDACFQLAEEALAAGEVPVGCVMFYAGQVIARGRNRVNKTKNACRHAEMDCVDQVLDWCA 84

Query: 68  Q------EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
           +      E+   V ++VT+EPC MCAAA+   R+ R+ +G  N + GG+  G+    L  
Sbjct: 85  ERGLDTGEVFRGVSVFVTVEPCIMCAAALDSLRVSRVVFGCPNERFGGV--GSVLDVLRG 142

Query: 122 CHHSPEIYPGISEQRSRQIIQDFF 145
                 +  G+  +R+  ++++F+
Sbjct: 143 TGGRTVVVAGVRAERAVNLLKEFY 166


>gi|47156908|gb|AAT12300.1| cytidine and deoxycytidylate deaminase-like protein [Antonospora
           locustae]
          Length = 156

 Score = 68.6 bits (166), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 45/110 (40%), Positives = 57/110 (51%), Gaps = 9/110 (8%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M   + FM  A+ EA+ A    E+PVG V V  + +ISR  N      D  AHAE++A+R
Sbjct: 1   MDYNSQFMDEAVSEAEKALEAGEVPVGCVVVREDAVISRGHNMTNRESDPLAHAELVALR 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIR-RLYYGASNPKGGG 109
                 S E L     Y+T EPC MC     L RIR R++YG  NP  GG
Sbjct: 61  ---HCASAESLV---FYITCEPCIMCLGV--LGRIRARVFYGCRNPIFGG 102


>gi|116494635|ref|YP_806369.1| cytosine/adenosine deaminase [Lactobacillus casei ATCC 334]
 gi|227535386|ref|ZP_03965435.1| guanine deaminase [Lactobacillus paracasei subsp. paracasei ATCC
           25302]
 gi|239631766|ref|ZP_04674797.1| cytosine/adenosine deaminase [Lactobacillus paracasei subsp.
           paracasei 8700:2]
 gi|116104785|gb|ABJ69927.1| Cytosine/adenosine deaminase [Lactobacillus casei ATCC 334]
 gi|227186982|gb|EEI67049.1| guanine deaminase [Lactobacillus paracasei subsp. paracasei ATCC
           25302]
 gi|239526231|gb|EEQ65232.1| cytosine/adenosine deaminase [Lactobacillus paracasei subsp.
           paracasei 8700:2]
          Length = 155

 Score = 68.6 bits (166), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 39/96 (40%), Positives = 54/96 (56%), Gaps = 1/96 (1%)

Query: 7   FMSCALEEAQ-NAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           FM+ A EEA+ N    +  P G V + + K++SRA N+     D TAH EI AIR   + 
Sbjct: 6   FMAMANEEAKANVNGSDGGPFGCVIIKDGKVVSRAHNQVLVDHDPTAHGEITAIRKAGQA 65

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
           L    L   +LY +  PC MC +AI  A I+++YYG
Sbjct: 66  LGTHDLTGCELYTSAMPCPMCLSAIIWANIKQVYYG 101


>gi|150402044|ref|YP_001329338.1| CMP/dCMP deaminase zinc-binding [Methanococcus maripaludis C7]
 gi|150033074|gb|ABR65187.1| CMP/dCMP deaminase zinc-binding [Methanococcus maripaludis C7]
          Length = 145

 Score = 68.6 bits (166), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 44/144 (30%), Positives = 71/144 (49%), Gaps = 18/144 (12%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  A++EA+       IP+GAV V  NKII R  NR  +      HAE+ A+    R L
Sbjct: 4   FMDEAIKEAKLGLKEGGIPIGAVLVYKNKIIGRGHNRRVQNNSAILHAEMDALENAGR-L 62

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG----IENGTQFYTLATC 122
           + ++    +LY TL PC MC+ A+ L +I+++  G +    G     ++NG     L   
Sbjct: 63  TSDVYRNCELYTTLSPCIMCSGAVLLYKIKKVVIGENKTFLGAEDLLLKNGVAVEVL--- 119

Query: 123 HHSPEIYPGISEQRSRQIIQDFFK 146
                     +++R  ++++DF K
Sbjct: 120 ----------NDERCVKMMKDFIK 133


>gi|301066190|ref|YP_003788213.1| cytosine/adenosine deaminase [Lactobacillus casei str. Zhang]
 gi|300438597|gb|ADK18363.1| Cytosine/adenosine deaminase [Lactobacillus casei str. Zhang]
          Length = 155

 Score = 68.6 bits (166), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 39/96 (40%), Positives = 54/96 (56%), Gaps = 1/96 (1%)

Query: 7   FMSCALEEAQ-NAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           FM+ A EEA+ N    +  P G V + + K++SRA N+     D TAH EI AIR   + 
Sbjct: 6   FMAMANEEAKANVNGSDGGPFGCVIIKDGKVVSRAHNQVLVDHDPTAHGEITAIRKAGQA 65

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
           L    L   +LY +  PC MC +AI  A I+++YYG
Sbjct: 66  LGTHDLTGCELYTSAMPCPMCLSAIIWANIKQVYYG 101


>gi|226324154|ref|ZP_03799672.1| hypothetical protein COPCOM_01932 [Coprococcus comes ATCC 27758]
 gi|225207703|gb|EEG90057.1| hypothetical protein COPCOM_01932 [Coprococcus comes ATCC 27758]
          Length = 153

 Score = 68.6 bits (166), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 35/95 (36%), Positives = 50/95 (52%)

Query: 55  EILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           + L  +   +++    L E  LYVTLEPC MC+ AI  ARI R+  G  NPK G   +  
Sbjct: 3   KFLQSKKASKVMGDWRLEECTLYVTLEPCQMCSGAIVQARIPRVVVGCMNPKAGCAGSIL 62

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
               +   +H  E+  GI E+   Q+++ FFKE R
Sbjct: 63  NLLQVEAFNHQAELTTGILEEECSQMMKSFFKELR 97


>gi|310819974|ref|YP_003952332.1| cytidine and deoxycytidylate deaminase zinc-binding
           domain-containing protein [Stigmatella aurantiaca
           DW4/3-1]
 gi|309393046|gb|ADO70505.1| Cytidine and deoxycytidylate deaminase zinc-binding domain protein
           [Stigmatella aurantiaca DW4/3-1]
          Length = 154

 Score = 68.6 bits (166), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 55/143 (38%), Positives = 74/143 (51%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  AL  A+ A    E+PVGAVAV   ++I    NR    +   AHAE+LA+    R L
Sbjct: 6   FMQQALALAREAEALGEVPVGAVAVHQGQVIGTGFNRREIDRHPFAHAELLALDAAARSL 65

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L  V LYVTLEPC MCA A+   R+ RL +G  +PK G   +          +H  
Sbjct: 66  GVWRLTGVTLYVTLEPCAMCAGAMVQGRVTRLVFGTLDPKAGAAGSLYNLVEEPRHNHRL 125

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           ++  GI    SRQ+++ FF+  R
Sbjct: 126 QVTSGILADESRQLLKGFFERLR 148


>gi|209964980|ref|YP_002297895.1| guanine deaminase [Rhodospirillum centenum SW]
 gi|209958446|gb|ACI99082.1| guanine deaminase [Rhodospirillum centenum SW]
          Length = 158

 Score = 68.6 bits (166), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 40/112 (35%), Positives = 54/112 (48%), Gaps = 10/112 (8%)

Query: 25  PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84
           P GAV VL+  ++    NR     D TAHAEI+AIR  C  L +  L    +Y + EPC 
Sbjct: 27  PFGAVIVLDGTVVGEGWNRVTSSNDPTAHAEIVAIREACARLGRFDLRGATVYSSCEPCP 86

Query: 85  MCAAAISLARIRRLYYGASNPKGG--GIENGTQFYTLA--------TCHHSP 126
           MC AAI  AR+ RL Y  +  +    G ++   +  +          CHH P
Sbjct: 87  MCLAAIHWARLDRLVYANTRDEAAAIGFDDALIYDQIPLPPAQRRLPCHHHP 138


>gi|169633781|ref|YP_001707517.1| guanine deaminase (Guanase) (guanine aminase) (guanine
           aminohydrolase) (GAH) (GDEase) [Acinetobacter baumannii
           SDF]
 gi|169152573|emb|CAP01555.1| Guanine deaminase (Guanase) (Guanine aminase) (Guanine
           aminohydrolase) (GAH) (GDEase) [Acinetobacter baumannii]
          Length = 160

 Score = 68.6 bits (166), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 40/107 (37%), Positives = 56/107 (52%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           MK    F+  A+E A N   +   P GAV V + K+I+   N+     D TAHAE+LAIR
Sbjct: 1   MKANQEFLRQAIELAYNNIEKGGRPFGAVIVKDGKVIASGVNQILTTNDPTAHAELLAIR 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKG 107
              ++L    L    ++ +  PC MC AA+ LA I+ + Y  SN  G
Sbjct: 61  AASQVLGTANLEGCSVFASGHPCPMCMAAMRLAGIKTVNYAYSNEDG 107


>gi|330995719|ref|ZP_08319617.1| guanine deaminase [Paraprevotella xylaniphila YIT 11841]
 gi|329574778|gb|EGG56339.1| guanine deaminase [Paraprevotella xylaniphila YIT 11841]
          Length = 155

 Score = 68.2 bits (165), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 39/110 (35%), Positives = 53/110 (48%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  A+E +         P GAV V  ++I++   NR     D TAHAE+ AIR  CR L
Sbjct: 6   FMRKAIELSVENVKNGGGPFGAVIVKGDEIVATGVNRVTAHNDPTAHAEVSAIREACRRL 65

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116
               L   ++Y + EPC MC  AI  A + ++YYG +      I     F
Sbjct: 66  GTFDLSGCEIYTSCEPCPMCLGAIYWAHLDKIYYGNNKDDAADIGFDDSF 115


>gi|332874597|ref|ZP_08442498.1| putative guanine deaminase [Acinetobacter baumannii 6014059]
 gi|322507943|gb|ADX03397.1| guaD [Acinetobacter baumannii 1656-2]
 gi|323517535|gb|ADX91916.1| CMP/dCMP deaminase zinc-binding protein [Acinetobacter baumannii
           TCDC-AB0715]
 gi|332737235|gb|EGJ68161.1| putative guanine deaminase [Acinetobacter baumannii 6014059]
          Length = 160

 Score = 68.2 bits (165), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 40/107 (37%), Positives = 56/107 (52%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           MK    F+  A+E A N   +   P GAV V + K+I+   N+     D TAHAE+LAIR
Sbjct: 1   MKANQEFLRQAIELAYNNIEKGGRPFGAVIVKDGKVIASGVNQILTTNDPTAHAELLAIR 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKG 107
              ++L    L    ++ +  PC MC AA+ LA I+ + Y  SN  G
Sbjct: 61  AASQVLGTANLEGCSVFASGHPCPMCMAAMRLAGIKTVNYAYSNEDG 107


>gi|260555502|ref|ZP_05827723.1| guanine deaminase [Acinetobacter baumannii ATCC 19606]
 gi|260412044|gb|EEX05341.1| guanine deaminase [Acinetobacter baumannii ATCC 19606]
          Length = 160

 Score = 68.2 bits (165), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 40/107 (37%), Positives = 56/107 (52%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           MK    F+  A+E A N   +   P GAV V + K+I+   N+     D TAHAE+LAIR
Sbjct: 1   MKANQEFLRQAIELAYNNIEKGGRPFGAVIVKDGKVIASGVNQILTTNDPTAHAELLAIR 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKG 107
              ++L    L    ++ +  PC MC AA+ LA I+ + Y  SN  G
Sbjct: 61  AASQVLGTANLEGCSVFASGHPCPMCMAAMRLAGIKTVNYAYSNEDG 107


>gi|191638132|ref|YP_001987298.1| Guanine deaminase [Lactobacillus casei BL23]
 gi|190712434|emb|CAQ66440.1| Guanine deaminase [Lactobacillus casei BL23]
 gi|327382160|gb|AEA53636.1| Cytidine/deoxycytidylate deaminase [Lactobacillus casei LC2W]
 gi|327385358|gb|AEA56832.1| Cytidine/deoxycytidylate deaminase [Lactobacillus casei BD-II]
          Length = 155

 Score = 68.2 bits (165), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 40/105 (38%), Positives = 56/105 (53%), Gaps = 1/105 (0%)

Query: 7   FMSCALEEAQ-NAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           FM+ A EEA+ N    +  P G V + + K++SRA N+     D TAH EI AIR   + 
Sbjct: 6   FMAMANEEAKANVNGSDGGPFGCVIIKDGKVVSRAHNQVLVDHDPTAHGEITAIRKAGQA 65

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI 110
           L    L   +LY +  PC MC +AI  A I+++YYG +      I
Sbjct: 66  LGTHDLTGCELYTSAMPCPMCLSAIIWANIKQVYYGNTADDAAAI 110


>gi|146179283|ref|XP_001470903.1| conserved hypothetical protein [Tetrahymena thermophila]
 gi|146144561|gb|EDK31523.1| conserved hypothetical protein [Tetrahymena thermophila SB210]
          Length = 160

 Score = 68.2 bits (165), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 39/101 (38%), Positives = 56/101 (55%), Gaps = 1/101 (0%)

Query: 1   MKKGNVFMSCALEEAQNAALRNE-IPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
           M     F+  A++EA+ A +  +  P G V V + KII RA NR     D TAHAE +AI
Sbjct: 4   MNDHQYFIQEAIKEAELAVITGDGEPFGCVIVRDGKIIVRAHNRLYIDYDPTAHAETVAI 63

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
           R+ C+     IL +  +Y + +PC MC+ AIS    + +YY
Sbjct: 64  RLACKQEKSLILKDCIIYASAQPCPMCSTAISACGAKEVYY 104


>gi|261416951|ref|YP_003250634.1| CMP/dCMP deaminase zinc-binding protein [Fibrobacter succinogenes
           subsp. succinogenes S85]
 gi|261373407|gb|ACX76152.1| CMP/dCMP deaminase zinc-binding protein [Fibrobacter succinogenes
           subsp. succinogenes S85]
 gi|302327524|gb|ADL26725.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein
           [Fibrobacter succinogenes subsp. succinogenes S85]
          Length = 164

 Score = 68.2 bits (165), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 36/110 (32%), Positives = 55/110 (50%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  A++ + +       P GAV V + ++++   NR     D TAHAE+ AIR  C  L
Sbjct: 15  FMQMAIQLSVDNVDNGGGPFGAVIVKDGEVVATGANRVVPNNDPTAHAEVTAIRNACAKL 74

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116
              +L    +Y + EPC MC +A+  AR++R+ Y  +      IE    F
Sbjct: 75  GTFMLDGCTVYTSCEPCPMCLSALYWARVKRICYANTKVDAAAIEFDDSF 124


>gi|15806226|ref|NP_294931.1| cell cycle protein MesJ /cytosine deaminase-like protein
           [Deinococcus radiodurans R1]
 gi|84039866|gb|AAF10777.2|AE001969_6 cell cycle protein MesJ, putative/cytosine deaminase-related
           protein [Deinococcus radiodurans R1]
          Length = 600

 Score = 68.2 bits (165), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 50/131 (38%), Positives = 69/131 (52%), Gaps = 4/131 (3%)

Query: 21  RNEIPVGAVAVLN--NKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYV 78
           R E+PVGAV VLN   +I+ R  N +RE  D+T HAE+ A+R     L    L +  L V
Sbjct: 439 RQEVPVGAV-VLNADGEIVGRGRNTSREDGDMTCHAELAALREAAAGLGTPYLSDCTLVV 497

Query: 79  TLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSR 138
           TLEPC MC  A   ARI  + YGA+NPK G +  G            P +  G+    + 
Sbjct: 498 TLEPCPMCLGAALEARIGHIVYGAANPKAGAL-GGVSDLLADHWGWRPTVQGGVRAGEAA 556

Query: 139 QIIQDFFKERR 149
           +++++ F E R
Sbjct: 557 RLLREVFGEVR 567


>gi|332876785|ref|ZP_08444543.1| guanine deaminase [Capnocytophaga sp. oral taxon 329 str. F0087]
 gi|332685344|gb|EGJ58183.1| guanine deaminase [Capnocytophaga sp. oral taxon 329 str. F0087]
          Length = 155

 Score = 68.2 bits (165), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 39/110 (35%), Positives = 53/110 (48%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  A+E +         P GAV V  ++I++   NR     D TAHAE+ AIR  CR L
Sbjct: 6   FMRKAIELSVENVKNGGGPFGAVIVKGDEIVATGVNRVTAHNDPTAHAEVSAIREACRRL 65

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116
               L   ++Y + EPC MC  AI  A + ++YYG +      I     F
Sbjct: 66  GTFDLSGCEIYTSCEPCPMCLGAIYWAHLDKIYYGNNKDDAADIGFDDSF 115


>gi|52079816|ref|YP_078607.1| guanine deaminase [Bacillus licheniformis ATCC 14580]
 gi|52785186|ref|YP_091015.1| GuaD [Bacillus licheniformis ATCC 14580]
 gi|319646374|ref|ZP_08000604.1| GuaD protein [Bacillus sp. BT1B_CT2]
 gi|52003027|gb|AAU22969.1| guanine deaminase [Bacillus licheniformis ATCC 14580]
 gi|52347688|gb|AAU40322.1| GuaD [Bacillus licheniformis ATCC 14580]
 gi|317392124|gb|EFV72921.1| GuaD protein [Bacillus sp. BT1B_CT2]
          Length = 156

 Score = 68.2 bits (165), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 35/90 (38%), Positives = 48/90 (53%), Gaps = 2/90 (2%)

Query: 25  PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84
           P GAV V + +II+   N      D TAHAE+ AIR+ C  L    L +  LY + EPC 
Sbjct: 25  PFGAVIVKDGQIIAEGKNNVTTSNDPTAHAEVTAIRLACEALGDYQLNDCILYTSCEPCP 84

Query: 85  MCAAAISLARIRRLYYGA--SNPKGGGIEN 112
           MC  AI  AR + +Y+ A  S+    G ++
Sbjct: 85  MCLGAIYWARPKEVYFAAQHSDAASAGFDD 114


>gi|291326525|ref|ZP_06124898.2| tRNA-specific adenosine deaminase [Providencia rettgeri DSM 1131]
 gi|291314071|gb|EFE54524.1| tRNA-specific adenosine deaminase [Providencia rettgeri DSM 1131]
          Length = 169

 Score = 68.2 bits (165), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 45/145 (31%), Positives = 69/145 (47%), Gaps = 6/145 (4%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM+ AL  A +AA     P GAV V NN+++    N      D T HAE+  IR  C   
Sbjct: 23  FMTQALALATDAAKNGNEPFGAVLVKNNQVVMTGENHIHTESDPTYHAELGLIRQYCSEH 82

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPK-----GGGIENGTQFYTLAT 121
               L +  LY + EPC MC+ A+  +++ R+ Y  S+ +     G  I  G+     A 
Sbjct: 83  KVMDLSDYTLYTSCEPCCMCSGAMVWSQLGRMVYSLSHDELAEIAGFNIMLGSD-EIFAK 141

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFK 146
               PE+  G+ ++++  I   +FK
Sbjct: 142 SPFKPEVVKGVLKEQAISIYTQYFK 166


>gi|300120277|emb|CBK19831.2| unnamed protein product [Blastocystis hominis]
          Length = 155

 Score = 68.2 bits (165), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 46/144 (31%), Positives = 70/144 (48%), Gaps = 20/144 (13%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR--MGCR 64
           ++  A EEA  A    E+P+G V V +N                T HAE++AI   +G  
Sbjct: 10  YLELAYEEANVAFEEREVPIGCVFVKDN---------------ATLHAEMVAISRTLGAN 54

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT---LAT 121
                I     LYVT+EPC MCA+AI+   + R+ +GASN + GG  +    +     + 
Sbjct: 55  GNDPTIFEGSTLYVTIEPCIMCASAIAQIGVSRVVFGASNDRFGGCGSVLSLHDQNEFSA 114

Query: 122 CHHSPEIYPGISEQRSRQIIQDFF 145
            H   E+   I ++RS +I+Q F+
Sbjct: 115 GHKHYEVTRHIQKERSIEILQRFY 138


>gi|157691996|ref|YP_001486458.1| guanine deaminase [Bacillus pumilus SAFR-032]
 gi|157680754|gb|ABV61898.1| guanine deaminase [Bacillus pumilus SAFR-032]
          Length = 156

 Score = 68.2 bits (165), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 33/80 (41%), Positives = 45/80 (56%)

Query: 25  PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84
           P GAV V + +II+   N      D TAHAE+ AIR  C+ L+   L +  LY + EPC 
Sbjct: 25  PFGAVIVKDGQIIAEGSNNVTTTNDPTAHAEVTAIRKACQTLNTYQLEDCILYTSCEPCP 84

Query: 85  MCAAAISLARIRRLYYGASN 104
           MC  AI  AR + +Y+ A +
Sbjct: 85  MCLGAIYWARPKAVYFAAGH 104


>gi|326428921|gb|EGD74491.1| tRNA-specific adenosine deaminase [Salpingoeca sp. ATCC 50818]
          Length = 191

 Score = 68.2 bits (165), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 46/140 (32%), Positives = 70/140 (50%), Gaps = 7/140 (5%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELK-DVTAHAEILAI-----RM 61
           M  A+ EAQ A    E+PVG V V +N  +  AG     ++ + T HAE++A      R 
Sbjct: 1   MEAAVAEAQRALAEGEVPVGCVFVDDNGNVQAAGRNQTNIEHNATRHAELVAFDDCVARC 60

Query: 62  GCRI-LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
           G  +  +++I+    LYVT+EPC MCA A+ L  + R+ +G  N + GG  +     T  
Sbjct: 61  GGDVEKAKDIVASCTLYVTVEPCVMCAYALRLLGVTRVVFGCHNDRFGGCGSTMDVATCE 120

Query: 121 TCHHSPEIYPGISEQRSRQI 140
           T    P++       R+R I
Sbjct: 121 TPDGLPKLQLEAGPMRTRAI 140


>gi|115378509|ref|ZP_01465666.1| tRNA-specific adenosine deaminase [Stigmatella aurantiaca DW4/3-1]
 gi|115364478|gb|EAU63556.1| tRNA-specific adenosine deaminase [Stigmatella aurantiaca DW4/3-1]
          Length = 148

 Score = 68.2 bits (165), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 49/128 (38%), Positives = 67/128 (52%)

Query: 22  NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81
            E+PVGAVAV   ++I    NR    +   AHAE+LA+    R L    L  V LYVTLE
Sbjct: 15  GEVPVGAVAVHQGQVIGTGFNRREIDRHPFAHAELLALDAAARSLGVWRLTGVTLYVTLE 74

Query: 82  PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141
           PC MCA A+   R+ RL +G  +PK G   +          +H  ++  GI    SRQ++
Sbjct: 75  PCAMCAGAMVQGRVTRLVFGTLDPKAGAAGSLYNLVEEPRHNHRLQVTSGILADESRQLL 134

Query: 142 QDFFKERR 149
           + FF+  R
Sbjct: 135 KGFFERLR 142


>gi|194015030|ref|ZP_03053647.1| cytidine/deoxycytidylate deaminase family protein [Bacillus pumilus
           ATCC 7061]
 gi|194014056|gb|EDW23621.1| cytidine/deoxycytidylate deaminase family protein [Bacillus pumilus
           ATCC 7061]
          Length = 156

 Score = 68.2 bits (165), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 33/80 (41%), Positives = 45/80 (56%)

Query: 25  PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84
           P GAV V + +II+   N      D TAHAE+ AIR  C+ L+   L +  LY + EPC 
Sbjct: 25  PFGAVIVKDGQIIAEGSNNVTTTNDPTAHAEVTAIRKACQTLNTYQLEDCILYTSCEPCP 84

Query: 85  MCAAAISLARIRRLYYGASN 104
           MC  AI  AR + +Y+ A +
Sbjct: 85  MCLGAIYWARPKAVYFAAGH 104


>gi|188589366|ref|YP_001919994.1| cytidine/deoxycytidylate deaminase family protein [Clostridium
           botulinum E3 str. Alaska E43]
 gi|188499647|gb|ACD52783.1| guanine deaminase [Clostridium botulinum E3 str. Alaska E43]
          Length = 157

 Score = 68.2 bits (165), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 35/79 (44%), Positives = 46/79 (58%)

Query: 25  PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84
           P GA  V ++KII+ A N   +  D TAH E+ AIR  C  LS   L   +LY T EPC 
Sbjct: 25  PFGAAIVKDSKIIALANNTVIKDNDPTAHGEMNAIRQACNKLSTFDLSGCELYTTSEPCP 84

Query: 85  MCAAAISLARIRRLYYGAS 103
           MC +AI  + I ++YYG +
Sbjct: 85  MCMSAIIWSNISKVYYGCT 103


>gi|134045717|ref|YP_001097203.1| cytosine deaminase [Methanococcus maripaludis C5]
 gi|132663342|gb|ABO34988.1| Cytosine deaminase [Methanococcus maripaludis C5]
          Length = 145

 Score = 67.8 bits (164), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 44/144 (30%), Positives = 71/144 (49%), Gaps = 18/144 (12%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           F+  AL+EA+       IP+GAV V  N+II R  NR  +      HAE+ A+    R L
Sbjct: 4   FIDEALKEAKLGLEEGGIPIGAVLVYKNEIIGRGHNRRVQNNSAILHAEMDALENAGR-L 62

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG----IENGTQFYTLATC 122
           + ++    +LY TL PC MC+ A+ L +I+++  G +    G     I+NG     L   
Sbjct: 63  TSDVYKNCELYTTLSPCIMCSGAVLLYKIKKVIIGENETFLGAENLLIKNGVDVEVL--- 119

Query: 123 HHSPEIYPGISEQRSRQIIQDFFK 146
                     +++R  ++++DF K
Sbjct: 120 ----------NDERCVKMMEDFIK 133


>gi|61216750|sp|Q9RV23|TILS_DEIRA RecName: Full=tRNA(Ile)-lysidine synthase; AltName:
           Full=tRNA(Ile)-2-lysyl-cytidine synthase; AltName:
           Full=tRNA(Ile)-lysidine synthetase
          Length = 582

 Score = 67.8 bits (164), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 50/131 (38%), Positives = 69/131 (52%), Gaps = 4/131 (3%)

Query: 21  RNEIPVGAVAVLN--NKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYV 78
           R E+PVGAV VLN   +I+ R  N +RE  D+T HAE+ A+R     L    L +  L V
Sbjct: 421 RQEVPVGAV-VLNADGEIVGRGRNTSREDGDMTCHAELAALREAAAGLGTPYLSDCTLVV 479

Query: 79  TLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSR 138
           TLEPC MC  A   ARI  + YGA+NPK G +  G            P +  G+    + 
Sbjct: 480 TLEPCPMCLGAALEARIGHIVYGAANPKAGAL-GGVSDLLADHWGWRPTVQGGVRAGEAA 538

Query: 139 QIIQDFFKERR 149
           +++++ F E R
Sbjct: 539 RLLREVFGEVR 549


>gi|33323001|gb|AAQ07237.1|AF496545_1 hypothetical protein [Lactobacillus delbrueckii subsp. lactis]
          Length = 89

 Score = 67.8 bits (164), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 27/73 (36%), Positives = 47/73 (64%)

Query: 77  YVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQR 136
           +VTLEPC MCA AI  +RI+ +Y+ A +PK G   +    +++   +H PE+  G+ +++
Sbjct: 1   FVTLEPCAMCAGAIINSRIKEVYFAAMDPKAGAAGSVVDLFSVEKFNHHPEVIRGLYKEQ 60

Query: 137 SRQIIQDFFKERR 149
              +++DFF+E R
Sbjct: 61  GALLLKDFFREIR 73


>gi|184157635|ref|YP_001845974.1| cytosine/adenosine deaminase [Acinetobacter baumannii ACICU]
 gi|183209229|gb|ACC56627.1| Cytosine/adenosine deaminase [Acinetobacter baumannii ACICU]
          Length = 158

 Score = 67.8 bits (164), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 40/107 (37%), Positives = 56/107 (52%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           MK    F+  A+E A N   +   P GAV V + K+I+   N+     D TAHAE+LAIR
Sbjct: 1   MKANQEFLRQAIELAYNNIEKGGRPFGAVIVKDGKVIASGVNQILTTNDPTAHAELLAIR 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKG 107
              ++L    L    ++ +  PC MC AA+ LA I+ + Y  SN  G
Sbjct: 61  AASQVLGTANLEGCSVFASGHPCPMCMAAMRLAGIKTVNYAYSNEDG 107


>gi|311067822|ref|YP_003972745.1| guanine deaminase [Bacillus atrophaeus 1942]
 gi|310868339|gb|ADP31814.1| guanine deaminase [Bacillus atrophaeus 1942]
          Length = 156

 Score = 67.8 bits (164), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 41/103 (39%), Positives = 53/103 (51%), Gaps = 5/103 (4%)

Query: 5   NVFMSCALE---EAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           N F+  A+E   E  NA +    P GAV V + KII+   N      D TAHAE+ AIR 
Sbjct: 4   NEFLQRAVELATEGVNAGIGG--PFGAVIVKDGKIIAEGQNNVTTSNDPTAHAEVTAIRN 61

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASN 104
            C  L    L +  LY + EPC MC  AI  AR + +YY + +
Sbjct: 62  ACEALGSYQLDDCILYTSCEPCPMCLGAIYWARPKAVYYASEH 104


>gi|194476730|ref|YP_002048909.1| cytidine/deoxycytidylate deaminase family protein [Paulinella
           chromatophora]
 gi|171191737|gb|ACB42699.1| cytidine/deoxycytidylate deaminase family protein [Paulinella
           chromatophora]
          Length = 157

 Score = 67.8 bits (164), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 36/129 (27%), Positives = 66/129 (51%), Gaps = 3/129 (2%)

Query: 23  EIPVGAVAVLNN--KIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80
           ++P+ AV +LN   + +    N   + +D   HAE++A+R    +       +  L VTL
Sbjct: 28  DVPIAAV-ILNGAGQCVGWGRNSREKNQDPMGHAELIALRQAAVLRGSWRFDDCTLIVTL 86

Query: 81  EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140
           EPC MCA A+  AR++ + YG+ + K G +         A+ HH  +   G+    + ++
Sbjct: 87  EPCPMCAGALVQARMKFVVYGSYDYKRGALGGTVDLSNHASAHHYMKTKGGLEGTLASEV 146

Query: 141 IQDFFKERR 149
           ++ +F+ RR
Sbjct: 147 LETWFRRRR 155


>gi|72392897|ref|XP_847249.1| deaminase [Trypanosoma brucei TREU927]
 gi|62176083|gb|AAX70202.1| deaminase, putative [Trypanosoma brucei]
 gi|70803279|gb|AAZ13183.1| deaminase, putative [Trypanosoma brucei brucei strain 927/4
           GUTat10.1]
          Length = 225

 Score = 67.8 bits (164), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 54/170 (31%), Positives = 77/170 (45%), Gaps = 44/170 (25%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAV-----------------LNNKIISRAGNRNREL 47
           +VFM  AL+EA  A    E+PVG V V                 L   I++R  N     
Sbjct: 25  DVFMQAALKEATCALEEGEVPVGCVLVKADSSTAAQAQAGDDLALQKLIVARGRNATNRK 84

Query: 48  KDVTAHAEILAIRM-----------------GCRILSQEILPEVDLYVTLEPCTMCAAAI 90
               AHAE +A+                    C  +SQ++   V LYV +EPC MCAA +
Sbjct: 85  GHALAHAEFVAVEELLRQATAGTSENIGGGGNCGAVSQDLADYV-LYVVVEPCIMCAAML 143

Query: 91  SLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140
              R+R++Y+G +NP+ GG  NG    T+ + H+S   Y G S + +  I
Sbjct: 144 LYNRVRKVYFGCTNPRFGG--NG----TVLSVHNS---YKGCSGEDAALI 184


>gi|312129827|ref|YP_003997167.1| cmp/dcmp deaminase zinc-binding protein [Leadbetterella byssophila
           DSM 17132]
 gi|311906373|gb|ADQ16814.1| CMP/dCMP deaminase zinc-binding protein [Leadbetterella byssophila
           DSM 17132]
          Length = 168

 Score = 67.8 bits (164), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 32/81 (39%), Positives = 47/81 (58%)

Query: 24  IPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83
           +P+G V V N +II    N   E  + T+H E++AI   CR ++   L E  +Y TLEPC
Sbjct: 31  LPIGCVIVRNGEIIGEGHNEIFERVNPTSHGEMVAIERACRNINSLQLSECQMYTTLEPC 90

Query: 84  TMCAAAISLARIRRLYYGASN 104
            MC  AI  A+I ++Y+  +N
Sbjct: 91  PMCLGAIYWAKINKVYFANTN 111


>gi|261330463|emb|CBH13447.1| deaminase, putative [Trypanosoma brucei gambiense DAL972]
          Length = 225

 Score = 67.8 bits (164), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 48/144 (33%), Positives = 66/144 (45%), Gaps = 37/144 (25%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAV-----------------LNNKIISRAGNRNREL 47
           +VFM  AL+EA  A    E+PVG V V                 L   I++R  N     
Sbjct: 25  DVFMQAALKEATCALEEGEVPVGCVLVKADSSTAAQAQAGDDLALQKLIVARGRNATNRK 84

Query: 48  KDVTAHAEILAIRM-----------------GCRILSQEILPEVDLYVTLEPCTMCAAAI 90
               AHAE +A+                    C  +SQ++   V LYV +EPC MCAA +
Sbjct: 85  GHALAHAEFVAVEELLRQATAGTSENIGGGGNCGAVSQDLADYV-LYVVVEPCIMCAAML 143

Query: 91  SLARIRRLYYGASNPKGGGIENGT 114
              R+R++Y+G +NP+ GG  NGT
Sbjct: 144 LYNRVRKVYFGCTNPRFGG--NGT 165


>gi|187935669|ref|YP_001884839.1| cytidine/deoxycytidylate deaminase family protein [Clostridium
           botulinum B str. Eklund 17B]
 gi|187723822|gb|ACD25043.1| guanine deaminase [Clostridium botulinum B str. Eklund 17B]
          Length = 157

 Score = 67.8 bits (164), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 35/79 (44%), Positives = 44/79 (55%)

Query: 25  PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84
           P GA  V + +II+ A N      D TAH E+ AIR  C  LS   L   +LY T EPC 
Sbjct: 25  PFGAAIVKDGEIIALANNTVISTNDPTAHGEVNAIRQACSKLSTFDLTGCELYTTSEPCP 84

Query: 85  MCAAAISLARIRRLYYGAS 103
           MC +AI  A I ++YYG +
Sbjct: 85  MCMSAIIWANISKVYYGCT 103


>gi|284037689|ref|YP_003387619.1| CMP/dCMP deaminase zinc-binding protein [Spirosoma linguale DSM 74]
 gi|283816982|gb|ADB38820.1| CMP/dCMP deaminase zinc-binding protein [Spirosoma linguale DSM 74]
          Length = 158

 Score = 67.8 bits (164), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 39/115 (33%), Positives = 57/115 (49%), Gaps = 1/115 (0%)

Query: 3   KGNVFMSCALEEAQNAALRNEI-PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           +  VF+  A++ A+     ++  P G+V V + +I+ +  N      D TAHAE++AIR 
Sbjct: 4   QDEVFLREAIQLAREGMTTDQGGPFGSVIVRDGQIVGKGFNMVTSTNDPTAHAEVVAIRD 63

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116
            CR L    L    LY + EPC MC  AI  AR  R+ Y A +     +    QF
Sbjct: 64  ACRNLGTFQLDGCTLYASCEPCPMCLGAIYWARPSRVVYAAQHADAASVGFDDQF 118


>gi|227538659|ref|ZP_03968708.1| possible cytosine deaminase [Sphingobacterium spiritivorum ATCC
           33300]
 gi|227241578|gb|EEI91593.1| possible cytosine deaminase [Sphingobacterium spiritivorum ATCC
           33300]
          Length = 94

 Score = 67.8 bits (164), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 35/100 (35%), Positives = 52/100 (52%), Gaps = 6/100 (6%)

Query: 50  VTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109
           +TAHAE+ A       L  + L +  LYVT+EPC MCA A    ++ R+ YGA + K G 
Sbjct: 1   MTAHAEMQAFTAASSYLGGKYLKDCTLYVTVEPCVMCAGASYWTQVSRIVYGAPDEKRGA 60

Query: 110 IENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
              G  F      H   EI  G+ ++   ++I  FF+++R
Sbjct: 61  SRYGKLF------HPKTEIISGVLQEECAELITSFFRQKR 94


>gi|220904518|ref|YP_002479830.1| CMP/dCMP deaminase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
 gi|219868817|gb|ACL49152.1| CMP/dCMP deaminase zinc-binding [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
          Length = 155

 Score = 67.8 bits (164), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 40/100 (40%), Positives = 53/100 (53%), Gaps = 2/100 (2%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  A+E ++ +      P GAV V + KII    N      D TAHAE+ AIR  CR L
Sbjct: 6   FMERAIELSKQSMAAGGGPFGAVIVRDGKIIGEGTNNVTPHNDPTAHAEVEAIRNACRAL 65

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPK 106
               L    ++ + EPC MC +AI  ARI ++Y+  SN K
Sbjct: 66  ETFDLSGSAIFTSCEPCPMCLSAIWWARIGKIYF--SNTK 103


>gi|251780701|ref|ZP_04823621.1| guanine deaminase [Clostridium botulinum E1 str. 'BoNT E Beluga']
 gi|243085016|gb|EES50906.1| guanine deaminase [Clostridium botulinum E1 str. 'BoNT E Beluga']
          Length = 157

 Score = 67.8 bits (164), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 35/79 (44%), Positives = 45/79 (56%)

Query: 25  PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84
           P GA  V + KII+ A N   +  D TAH E+ AIR  C  LS   L   +LY T EPC 
Sbjct: 25  PFGAAIVKDGKIIALANNTVIKDNDPTAHGEMNAIRQACNKLSTFDLSGCELYTTSEPCP 84

Query: 85  MCAAAISLARIRRLYYGAS 103
           MC +AI  + I ++YYG +
Sbjct: 85  MCMSAIIWSNISKVYYGCT 103


>gi|302873177|ref|YP_003841810.1| CMP/dCMP deaminase zinc-binding [Clostridium cellulovorans 743B]
 gi|307688659|ref|ZP_07631105.1| CMP/dCMP deaminase zinc-binding protein [Clostridium cellulovorans
           743B]
 gi|302576034|gb|ADL50046.1| CMP/dCMP deaminase zinc-binding [Clostridium cellulovorans 743B]
          Length = 169

 Score = 67.8 bits (164), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 48/145 (33%), Positives = 75/145 (51%), Gaps = 11/145 (7%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNN-KIISRAGNRNRELKDVTAHAEILAIR-MGCR 64
           +++ A EEA  A      P+GAV V ++  I+S+  NR     D TAHAE+ AIR  G +
Sbjct: 8   YLALAFEEANQAFEEGTYPIGAVIVDDDGNIVSKGRNRVFTESDCTAHAEVDAIRKAGHK 67

Query: 65  ILS----QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI---ENGTQFY 117
           +L     + +   + LY T EPC MC   I L+ I+R+ + A + + GGI   + G  F 
Sbjct: 68  LLDIPNKRFVKNNLTLYTTCEPCPMCTCTILLSGIKRVVWAADDDEYGGIRKFKEGPHFI 127

Query: 118 TL-ATCHHSPEIYPGISEQRSRQII 141
            L  T  ++   Y  + E + R ++
Sbjct: 128 NLFDTITYTASPYDDL-ENKQRDLL 151


>gi|260579466|ref|ZP_05847346.1| cytidine/deoxycytidylate deaminase family protein [Corynebacterium
           jeikeium ATCC 43734]
 gi|258602409|gb|EEW15706.1| cytidine/deoxycytidylate deaminase family protein [Corynebacterium
           jeikeium ATCC 43734]
          Length = 193

 Score = 67.4 bits (163), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 45/130 (34%), Positives = 65/130 (50%), Gaps = 3/130 (2%)

Query: 22  NEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEI-LPEVDLYVT 79
            ++PVGAV +  + + + R  NR     D TAHAEILAIR   + L     L +  L VT
Sbjct: 65  GDVPVGAVILGPDGRELGRGVNRREADNDPTAHAEILAIREAVQELGDAWRLEDCTLVVT 124

Query: 80  LEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139
           LEPC MCA A+  ARI  + +GA  P+ G   +       +  H   E+  G+      +
Sbjct: 125 LEPCAMCAGALVGARIGSIIFGAYEPRTGACGSVWDVPRESPLHWV-EVRGGVLAGECEE 183

Query: 140 IIQDFFKERR 149
           +++ FF   R
Sbjct: 184 LLRQFFARLR 193


>gi|163792400|ref|ZP_02186377.1| putative nucleotide deaminase [alpha proteobacterium BAL199]
 gi|159182105|gb|EDP66614.1| putative nucleotide deaminase [alpha proteobacterium BAL199]
          Length = 156

 Score = 67.4 bits (163), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 43/109 (39%), Positives = 54/109 (49%), Gaps = 2/109 (1%)

Query: 11  ALEEAQ-NAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQE 69
           A+E +Q NA      P GAV V +  I+    NR     D TAHAE++AIR  CR L   
Sbjct: 10  AIELSQGNAEAATGGPFGAVVVRDGMIVGEGANRVITDFDPTAHAEVVAIRAACRQLGTY 69

Query: 70  ILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIE-NGTQFY 117
            L    +Y + EPC MC AAI  ARI R+ Y  +      I  +   FY
Sbjct: 70  DLSGAVIYTSCEPCPMCLAAILWARIDRMVYANTRADAAAIGFDDAWFY 118


>gi|315647606|ref|ZP_07900708.1| CMP/dCMP deaminase zinc-binding protein [Paenibacillus vortex V453]
 gi|315277045|gb|EFU40386.1| CMP/dCMP deaminase zinc-binding protein [Paenibacillus vortex V453]
          Length = 159

 Score = 67.4 bits (163), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 40/111 (36%), Positives = 53/111 (47%), Gaps = 1/111 (0%)

Query: 7   FMSCALEEA-QNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           +M  A+EEA QN       P GA+ V   K+I R  N    L D TAHAE+ AIR  C  
Sbjct: 9   WMQIAIEEAHQNVQNVEGGPFGAIVVKEGKVIGRGRNLVTALNDPTAHAEVQAIREACLH 68

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116
           +    L    +Y + EPC MC  AI  +R   +YY ++  +   I     F
Sbjct: 69  MEDFQLKGCTIYTSCEPCPMCLGAIYWSRPDAVYYASTKKEAAEIGFDDHF 119


>gi|149278879|ref|ZP_01885014.1| cytidine/deoxycytidylate deaminase family protein [Pedobacter sp.
           BAL39]
 gi|149230498|gb|EDM35882.1| cytidine/deoxycytidylate deaminase family protein [Pedobacter sp.
           BAL39]
          Length = 168

 Score = 67.4 bits (163), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 34/96 (35%), Positives = 55/96 (57%), Gaps = 1/96 (1%)

Query: 7   FMSCALEEAQNAALRNE-IPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           FM  A++ ++   +  +  P GA  V   ++I+++ N+     D TAHAE+ AIR+ C+ 
Sbjct: 17  FMKIAIDASEENVISGKGTPFGAAIVKEGQLIAKSANKVTADNDPTAHAEVAAIRIACQE 76

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
           L+   L    +Y + EPC MC AAI  ++I  +YYG
Sbjct: 77  LNTYDLTGCVIYTSCEPCPMCLAAIYWSKISVVYYG 112


>gi|268317845|ref|YP_003291564.1| CMP/dCMP deaminase zinc-binding protein [Rhodothermus marinus DSM
           4252]
 gi|262335379|gb|ACY49176.1| CMP/dCMP deaminase zinc-binding protein [Rhodothermus marinus DSM
           4252]
          Length = 155

 Score = 67.4 bits (163), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 34/79 (43%), Positives = 45/79 (56%)

Query: 25  PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84
           P  A+ V + ++++   NR     D TAHAEI+AIR  CR L    L   DLY + EPC 
Sbjct: 24  PFAALVVRDGEVLAAGTNRVTTDNDPTAHAEIVAIREACRRLGHFQLTGCDLYTSCEPCP 83

Query: 85  MCAAAISLARIRRLYYGAS 103
           MC  AI  AR  R++Y A+
Sbjct: 84  MCLGAIYWARPARVFYAAT 102


>gi|268591994|ref|ZP_06126215.1| guanine deaminase [Providencia rettgeri DSM 1131]
 gi|291312385|gb|EFE52838.1| guanine deaminase [Providencia rettgeri DSM 1131]
          Length = 155

 Score = 67.4 bits (163), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 37/97 (38%), Positives = 58/97 (59%), Gaps = 4/97 (4%)

Query: 12  LEEAQNAALRN----EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           L++A N A+ N      P GA+ V + ++++   N+  EL D TAHAE++A+R   + LS
Sbjct: 7   LQQAINLAMENVRAGGRPFGAIVVCDGQVVASGVNQMLELNDPTAHAELMALRQAGQKLS 66

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASN 104
           +  L +  +Y + +PC MC AAI +A I R+ Y  SN
Sbjct: 67  RVKLDDCVVYASGQPCPMCLAAIRMAGISRVVYAYSN 103


>gi|224536998|ref|ZP_03677537.1| hypothetical protein BACCELL_01874 [Bacteroides cellulosilyticus
           DSM 14838]
 gi|224521365|gb|EEF90470.1| hypothetical protein BACCELL_01874 [Bacteroides cellulosilyticus
           DSM 14838]
          Length = 188

 Score = 67.4 bits (163), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 34/77 (44%), Positives = 43/77 (55%)

Query: 25  PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84
           P GAV   N +II+   NR     D TAHAE+ AIR  C+ L    L   ++Y + EPC 
Sbjct: 57  PFGAVIARNGEIIATGVNRVTAEHDPTAHAEVSAIRAACKKLGTFDLSGCEIYTSCEPCP 116

Query: 85  MCAAAISLARIRRLYYG 101
           MC  AI  A I ++YYG
Sbjct: 117 MCLGAIYWAHIDKMYYG 133


>gi|51248026|pdb|1WKQ|A Chain A, Crystal Structure Of Bacillus Subtilis Guanine Deaminase.
           The First Domain-Swapped Structure In The Cytidine
           Deaminase Superfamily
 gi|51248027|pdb|1WKQ|B Chain B, Crystal Structure Of Bacillus Subtilis Guanine Deaminase.
           The First Domain-Swapped Structure In The Cytidine
           Deaminase Superfamily
          Length = 164

 Score = 67.4 bits (163), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 33/80 (41%), Positives = 44/80 (55%)

Query: 25  PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84
           P GAV V +  II+   N      D TAHAE+ AIR  C++L    L +  LY + EPC 
Sbjct: 33  PFGAVIVKDGAIIAEGQNNVTTSNDPTAHAEVTAIRKACKVLGAYQLDDCILYTSCEPCP 92

Query: 85  MCAAAISLARIRRLYYGASN 104
           MC  AI  AR + ++Y A +
Sbjct: 93  MCLGAIYWARPKAVFYAAEH 112


>gi|313682141|ref|YP_004059879.1| cmp/dcmp deaminase zinc-binding protein [Sulfuricurvum kujiense DSM
           16994]
 gi|313155001|gb|ADR33679.1| CMP/dCMP deaminase zinc-binding protein [Sulfuricurvum kujiense DSM
           16994]
          Length = 145

 Score = 67.4 bits (163), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 40/95 (42%), Positives = 50/95 (52%), Gaps = 1/95 (1%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  AL EAQ       IP+G+V V N KII R  NR  +   V  H E+ A+    R L
Sbjct: 4   FMKEALLEAQKGLEEGGIPIGSVLVHNGKIIGRGHNRRIQKGSVILHGEMDALENAGR-L 62

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
           S  +  E  LY TL PC MC+ AI+L  I ++  G
Sbjct: 63  SASLYKECTLYTTLSPCPMCSGAIALYGIPKVVVG 97


>gi|16078382|ref|NP_389200.1| guanine deaminase [Bacillus subtilis subsp. subtilis str. 168]
 gi|221309178|ref|ZP_03591025.1| guanine deaminase [Bacillus subtilis subsp. subtilis str. 168]
 gi|221313504|ref|ZP_03595309.1| guanine deaminase [Bacillus subtilis subsp. subtilis str. NCIB
           3610]
 gi|221318426|ref|ZP_03599720.1| guanine deaminase [Bacillus subtilis subsp. subtilis str. JH642]
 gi|221322700|ref|ZP_03603994.1| guanine deaminase [Bacillus subtilis subsp. subtilis str. SMY]
 gi|321315069|ref|YP_004207356.1| guanine deaminase [Bacillus subtilis BSn5]
 gi|23396605|sp|O34598|GUAD_BACSU RecName: Full=Guanine deaminase; Short=GDEase; Short=Guanase;
           Short=Guanine aminase; AltName: Full=Guanine
           aminohydrolase; Short=GAH
 gi|2632037|emb|CAA05596.1| YkoA [Bacillus subtilis]
 gi|2633671|emb|CAB13174.1| guanine deaminase [Bacillus subtilis subsp. subtilis str. 168]
 gi|291483843|dbj|BAI84918.1| guanine deaminase [Bacillus subtilis subsp. natto BEST195]
 gi|320021343|gb|ADV96329.1| guanine deaminase [Bacillus subtilis BSn5]
          Length = 156

 Score = 67.4 bits (163), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 33/80 (41%), Positives = 44/80 (55%)

Query: 25  PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84
           P GAV V +  II+   N      D TAHAE+ AIR  C++L    L +  LY + EPC 
Sbjct: 25  PFGAVIVKDGAIIAEGQNNVTTSNDPTAHAEVTAIRKACKVLGAYQLDDCILYTSCEPCP 84

Query: 85  MCAAAISLARIRRLYYGASN 104
           MC  AI  AR + ++Y A +
Sbjct: 85  MCLGAIYWARPKAVFYAAEH 104


>gi|116491296|ref|YP_810840.1| cytosine/adenosine deaminase [Oenococcus oeni PSU-1]
 gi|290890847|ref|ZP_06553913.1| hypothetical protein AWRIB429_1303 [Oenococcus oeni AWRIB429]
 gi|116092021|gb|ABJ57175.1| Cytosine/adenosine deaminase [Oenococcus oeni PSU-1]
 gi|290479498|gb|EFD88156.1| hypothetical protein AWRIB429_1303 [Oenococcus oeni AWRIB429]
          Length = 148

 Score = 67.0 bits (162), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 40/100 (40%), Positives = 57/100 (57%), Gaps = 2/100 (2%)

Query: 8   MSCALEEA-QNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  A+E+A +N  L+   P GAV V + ++I  A N      D TAHAEI+AIR  C++L
Sbjct: 1   MKLAIEQANENIVLKEGGPFGAVIVRDQEVICAAHNMVLANLDPTAHAEIIAIRKACKVL 60

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPK 106
           +   L +  LY +  PC MC +A   A I+ + YG + PK
Sbjct: 61  ATCDLSDCTLYTSAYPCPMCLSATIWANIKEVRYG-NTPK 99


>gi|293335013|ref|NP_001169897.1| hypothetical protein LOC100383791 [Zea mays]
 gi|224032231|gb|ACN35191.1| unknown [Zea mays]
          Length = 180

 Score = 67.0 bits (162), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 32/83 (38%), Positives = 51/83 (61%), Gaps = 3/83 (3%)

Query: 25  PVGAVAVL---NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81
           P GAV V    +++++S + N  R+  D +AHAE+ AIR  C+ L +  L   ++Y + E
Sbjct: 45  PFGAVVVHGGGDDEVVSSSHNSVRKDADPSAHAEVTAIRQACKKLGKTSLAGCEIYTSCE 104

Query: 82  PCTMCAAAISLARIRRLYYGASN 104
           PC MC   I LA+I+++ YGA +
Sbjct: 105 PCPMCLGLIRLAKIKKVVYGAKS 127


>gi|224110294|ref|XP_002315474.1| predicted protein [Populus trichocarpa]
 gi|118483375|gb|ABK93588.1| unknown [Populus trichocarpa]
 gi|222864514|gb|EEF01645.1| predicted protein [Populus trichocarpa]
          Length = 186

 Score = 67.0 bits (162), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 42/97 (43%), Positives = 60/97 (61%), Gaps = 1/97 (1%)

Query: 7   FMSCALEEAQNAALRNEI-PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           F++ A+EEA       +  P GAV VLN++++    N   +  D TAHAE+ AIR  C+ 
Sbjct: 34  FLTKAVEEAYKGVDSGDGGPFGAVVVLNDEVVVACHNMVLKHTDPTAHAEVTAIREACKK 93

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGA 102
           L+Q  L + ++Y + EPC MC  AI L+RI+RL YGA
Sbjct: 94  LNQIELSDCEIYASCEPCPMCFGAIHLSRIKRLVYGA 130


>gi|323343460|ref|ZP_08083687.1| guanine deaminase [Prevotella oralis ATCC 33269]
 gi|323095279|gb|EFZ37853.1| guanine deaminase [Prevotella oralis ATCC 33269]
          Length = 156

 Score = 67.0 bits (162), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 37/92 (40%), Positives = 44/92 (47%)

Query: 25  PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84
           P GAV   N +II+ A NR     D TAHAE+ AIR   R L    L   D+Y + EPC 
Sbjct: 25  PFGAVVARNGEIIAEASNRVTIDHDPTAHAEVNAIRKAARELDTFDLSGCDIYTSCEPCP 84

Query: 85  MCAAAISLARIRRLYYGASNPKGGGIENGTQF 116
           MC  AI  A + R+YY         I     F
Sbjct: 85  MCLGAIYWAHLNRIYYANDRKDAARIGFDDDF 116


>gi|240168511|ref|ZP_04747170.1| hypothetical protein MkanA1_04312 [Mycobacterium kansasii ATCC
           12478]
          Length = 152

 Score = 67.0 bits (162), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 49/129 (37%), Positives = 69/129 (53%), Gaps = 2/129 (1%)

Query: 23  EIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEI-LPEVDLYVTL 80
           ++P+GAV V  +   +SRA N    L D TAHAEILA+R    +L     L    L VT+
Sbjct: 22  DVPIGAVVVGADGTELSRAVNAREALGDPTAHAEILALRAAAAVLGDGWRLEGTTLAVTV 81

Query: 81  EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140
           EPCTMCA A+ LAR+ RL +GA  PK G + +          +H P++  G+        
Sbjct: 82  EPCTMCAGALVLARVARLVFGAWEPKTGAVGSLWDVVRDRRLNHRPQVRGGVLAADCAAP 141

Query: 141 IQDFFKERR 149
           ++ FF  +R
Sbjct: 142 LEGFFARQR 150


>gi|148243600|ref|YP_001228757.1| nucleoside deaminase [Synechococcus sp. RCC307]
 gi|147851910|emb|CAK29404.1| Nucleoside deaminase [Synechococcus sp. RCC307]
          Length = 163

 Score = 67.0 bits (162), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 45/113 (39%), Positives = 58/113 (51%), Gaps = 8/113 (7%)

Query: 7   FMSCALEEAQNAAL--RNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           FM+ A+E ++  AL  R+  P GAV V +  +I+  GN      D TAHAEI AIR   R
Sbjct: 10  FMAQAIEISRQTALEERSGEPFGAVIVRDGVVIAAEGNSVNGDSDPTAHAEINAIRAAGR 69

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFY 117
            L    L    LY +   C MC  A   A IR++YYGA      G E+ + FY
Sbjct: 70  ALGTWDLSGCVLYASSRCCPMCYGAAHWAGIRKIYYGA------GWEDYSDFY 116


>gi|116694743|ref|YP_728954.1| cytosine deaminase-related enzyme [Ralstonia eutropha H16]
 gi|113529242|emb|CAJ95589.1| cytosine deaminase-related enzyme [Ralstonia eutropha H16]
          Length = 155

 Score = 67.0 bits (162), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 34/92 (36%), Positives = 53/92 (57%)

Query: 16  QNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVD 75
           +N   RN  P GAV V + ++++RA N+     D +AHAE+ A+R   R L +  L    
Sbjct: 17  ENVRERNTWPFGAVVVRDGEVLARAVNQVDATCDPSAHAEMQAVRAASRALGKPDLSGCT 76

Query: 76  LYVTLEPCTMCAAAISLARIRRLYYGASNPKG 107
           +Y +  PC+MC +A+ LA ++ +YY  SN  G
Sbjct: 77  VYASGYPCSMCLSAMYLAGVKAVYYAYSNEDG 108


>gi|218295213|ref|ZP_03496049.1| tRNA(Ile)-lysidine synthetase [Thermus aquaticus Y51MC23]
 gi|218244416|gb|EED10941.1| tRNA(Ile)-lysidine synthetase [Thermus aquaticus Y51MC23]
          Length = 509

 Score = 66.6 bits (161), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 53/146 (36%), Positives = 72/146 (49%), Gaps = 22/146 (15%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNR--ELKDVTAHAEILAIR-MGC 63
            M  ALEEA+ A    E+PVGAV VL  ++    G RNR   ++D TAHAE+L +R +G 
Sbjct: 377 LMGLALEEARKAYAEGEVPVGAVLVLEGEV---HGERNRVEAMEDPTAHAEMLLLRKLGK 433

Query: 64  RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123
           R           LYVTLEPC MC  A+  A +  + YG  N K G +    Q        
Sbjct: 434 RARGGR------LYVTLEPCRMCHHALMEAGV-EVVYGVENLKEGALTRYGQ-------- 478

Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149
               +  G+ E    ++++DFF   R
Sbjct: 479 -GGRMRGGLREGECAKLLRDFFARLR 503


>gi|152966037|ref|YP_001361821.1| CMP/dCMP deaminase zinc-binding [Kineococcus radiotolerans
           SRS30216]
 gi|151360554|gb|ABS03557.1| CMP/dCMP deaminase zinc-binding [Kineococcus radiotolerans
           SRS30216]
          Length = 161

 Score = 66.6 bits (161), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 43/131 (32%), Positives = 62/131 (47%), Gaps = 3/131 (2%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           F+  A+E A         P GAV V   ++++   NR     D TAHAE+ AIR  CR+ 
Sbjct: 12  FLERAVELATKNVAEGGGPFGAVLVRGGELLAAGQNRVTRDNDPTAHAEVQAIREACRLT 71

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKG--GGIENGTQFYTLATCHH 124
               L    LY + EPC MC A+   AR+ R+ Y A       GG ++ T FY L +   
Sbjct: 72  GTFSLHGTTLYSSCEPCPMCLASSLWARVDRVVYAADRDDAARGGFDDRT-FYELFSTDR 130

Query: 125 SPEIYPGISEQ 135
           +    P + ++
Sbjct: 131 ASWSTPVLQQE 141


>gi|189462876|ref|ZP_03011661.1| hypothetical protein BACCOP_03576 [Bacteroides coprocola DSM 17136]
 gi|189430492|gb|EDU99476.1| hypothetical protein BACCOP_03576 [Bacteroides coprocola DSM 17136]
          Length = 161

 Score = 66.6 bits (161), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 35/79 (44%), Positives = 44/79 (55%)

Query: 25  PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84
           P GAV   N +II+   NR     D TAHAE+ AIR   +IL    L   ++Y + EPC 
Sbjct: 30  PFGAVIAKNGEIIAMGVNRVTPDCDPTAHAEVSAIRTAAKILGTFDLSGCEIYTSCEPCP 89

Query: 85  MCAAAISLARIRRLYYGAS 103
           MC  AI  A + R+YYG S
Sbjct: 90  MCLGAIYWAHLDRMYYGNS 108


>gi|321465150|gb|EFX76153.1| hypothetical protein DAPPUDRAFT_306296 [Daphnia pulex]
          Length = 171

 Score = 66.6 bits (161), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 45/153 (29%), Positives = 72/153 (47%), Gaps = 18/153 (11%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNN-KIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           +M  A E A+ A    E+PVG V  L    II    NR  E K+ T HAE+ AI      
Sbjct: 8   YMDRAFELAREALSVGEVPVGCVLHLEGYGIIGEGRNRVNETKNATRHAELEAIDSALLW 67

Query: 66  LSQ-------EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
           + +       ++  + +++V +EPC  CA A+ +    R+YYG SN + GG  +      
Sbjct: 68  IKKNTSESYSQVFGKTEVWVNVEPCIQCAGALQILGFARVYYGCSNERFGGCGS-----V 122

Query: 119 LATCHHSP-----EIYPGISEQRSRQIIQDFFK 146
           L  C         +I  GI    + ++++DF++
Sbjct: 123 LDVCEKDKRFQRLQIQGGIRANEAIELLKDFYR 155


>gi|221068800|ref|ZP_03544905.1| CMP/dCMP deaminase zinc-binding [Comamonas testosteroni KF-1]
 gi|220713823|gb|EED69191.1| CMP/dCMP deaminase zinc-binding [Comamonas testosteroni KF-1]
          Length = 164

 Score = 66.6 bits (161), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 33/83 (39%), Positives = 51/83 (61%)

Query: 25  PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84
           P GAV V + KI++RA N+  +L D TAHAE+ A+R+  + L    L    +Y +  PC+
Sbjct: 30  PFGAVLVRDGKILARAVNQVDDLCDPTAHAEMQALRIAAKALGSTDLSGAVMYASGYPCS 89

Query: 85  MCAAAISLARIRRLYYGASNPKG 107
           MC  A+ LA ++++Y+  SN  G
Sbjct: 90  MCHTAMLLAGVKQVYFAYSNEDG 112


>gi|148643446|ref|YP_001273959.1| cytosine deaminase [Methanobrevibacter smithii ATCC 35061]
 gi|261349766|ref|ZP_05975183.1| cytosine deaminase [Methanobrevibacter smithii DSM 2374]
 gi|148552463|gb|ABQ87591.1| cytosine deaminase [Methanobrevibacter smithii ATCC 35061]
 gi|288860550|gb|EFC92848.1| cytosine deaminase [Methanobrevibacter smithii DSM 2374]
          Length = 158

 Score = 66.6 bits (161), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 41/101 (40%), Positives = 55/101 (54%), Gaps = 1/101 (0%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M     F++ AL+EA+ +     IP+GAV V + KIISR  NR  +   V  HAEI  I 
Sbjct: 1   MYDDTYFINEALKEAKKSLAEGGIPIGAVLVKDGKIISRGHNRLIQNDSVILHAEIDTIE 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
              R+  ++ L  V LY TL PC MC+ AI L  I ++  G
Sbjct: 61  NAGRLNHEDYLQSV-LYTTLSPCPMCSGAILLYNIPKVIIG 100


>gi|160896585|ref|YP_001562167.1| CMP/dCMP deaminase [Delftia acidovorans SPH-1]
 gi|160362169|gb|ABX33782.1| CMP/dCMP deaminase zinc-binding [Delftia acidovorans SPH-1]
          Length = 171

 Score = 66.6 bits (161), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 37/101 (36%), Positives = 56/101 (55%), Gaps = 1/101 (0%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIR 60
           ++  +++  A+  A  A  R   P GA+ V  + ++++ A N N E  D TAHAE+ AIR
Sbjct: 16  ERDGLYLRRAIAMADRARQRGNRPFGALIVAADGRVLAEASNANGESGDCTAHAELSAIR 75

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
           +   +  +E L    LY + EPC MCA AI  + I R+ YG
Sbjct: 76  LASPLHDREALSAATLYSSAEPCVMCAGAIFWSAIGRVVYG 116


>gi|282859465|ref|ZP_06268570.1| guanine deaminase [Prevotella bivia JCVIHMP010]
 gi|282587693|gb|EFB92893.1| guanine deaminase [Prevotella bivia JCVIHMP010]
          Length = 168

 Score = 66.6 bits (161), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 40/136 (29%), Positives = 61/136 (44%), Gaps = 5/136 (3%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
            M  A+E + N+      P GAV   N +I++   N+     D TAHAE+  IRM C+ L
Sbjct: 19  LMRRAIELSINSVRNGGGPFGAVIARNGEIVAEGSNKVTIDNDPTAHAEVSTIRMACKKL 78

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L   ++Y + EPC MC  AI  A + ++YY         I     F      +   
Sbjct: 79  DSFDLSGCEIYTSCEPCPMCLGAIYWAHLDKIYYANDRKDAANIGFDDDF-----IYQEI 133

Query: 127 EIYPGISEQRSRQIIQ 142
           E+ P   ++ S  ++Q
Sbjct: 134 EVQPQYRKKPSEILLQ 149


>gi|152992774|ref|YP_001358495.1| cytidine/deoxycytidylate deaminase family protein [Sulfurovum sp.
           NBC37-1]
 gi|151424635|dbj|BAF72138.1| cytidine/deoxycytidylate deaminase family protein [Sulfurovum sp.
           NBC37-1]
          Length = 153

 Score = 66.6 bits (161), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 36/76 (47%), Positives = 43/76 (56%)

Query: 25  PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84
           P GAV V + KII+   N   +  D TAHAE++AIR     L    L    LYVT EPC 
Sbjct: 23  PFGAVIVKDGKIIASGHNEVVKTNDPTAHAEMIAIRNASAKLQNFKLEGCTLYVTGEPCP 82

Query: 85  MCAAAISLARIRRLYY 100
           MC +AI  A I R+YY
Sbjct: 83  MCFSAIHWAHIERVYY 98


>gi|315305132|ref|ZP_07875140.1| cytidine/deoxycytidylate deaminase family protein [Listeria
           ivanovii FSL F6-596]
 gi|313626498|gb|EFR95623.1| cytidine/deoxycytidylate deaminase family protein [Listeria
           ivanovii FSL F6-596]
          Length = 81

 Score = 66.6 bits (161), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 30/73 (41%), Positives = 45/73 (61%)

Query: 77  YVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQR 136
           YVTLEPC MC+ AI L+RI ++YYGA +PK G   +          +H+ E+  G+ E  
Sbjct: 1   YVTLEPCPMCSGAILLSRIDKVYYGAKDPKAGTAGSLMNLLQDDRFNHTCEVESGLMEAE 60

Query: 137 SRQIIQDFFKERR 149
           S ++++ FF+E R
Sbjct: 61  SSEMLKSFFQELR 73


>gi|209879105|ref|XP_002140993.1| cytidine/deoxycytidylate deaminase family protein [Cryptosporidium
           muris RN66]
 gi|209556599|gb|EEA06644.1| cytidine/deoxycytidylate deaminase family protein [Cryptosporidium
           muris RN66]
          Length = 189

 Score = 66.6 bits (161), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 48/160 (30%), Positives = 75/160 (46%), Gaps = 20/160 (12%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           FM  AL+ A  A   +EIPVG + V     +I S A N      + T H E++A+     
Sbjct: 11  FMKEALKWATKAFDTDEIPVGCILVNRETKEIESAAHNETNISCNATRHCEVVALERLAD 70

Query: 65  ILSQEI--------------LPEV----DLYVTLEPCTMCAAAISLARIRRLYYGASNPK 106
            L QE+               PE     DL+VT+EPC MC   ++ A I+ +YYG  N +
Sbjct: 71  KLIQELDGINCKDINTKFPLKPEFGQYYDLFVTVEPCIMCIGILNQAGIKGIYYGCKNDR 130

Query: 107 GGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
            GG  +   F+ +   +   +I   I    + +++QDF++
Sbjct: 131 FGGCGSVIDFHDVIDINSEIQIKSNILADEAIKLLQDFYE 170


>gi|264677000|ref|YP_003276906.1| CMP/dCMP deaminase, zinc-binding protein [Comamonas testosteroni
           CNB-2]
 gi|262207512|gb|ACY31610.1| CMP/dCMP deaminase, zinc-binding protein [Comamonas testosteroni
           CNB-2]
          Length = 162

 Score = 66.2 bits (160), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 32/83 (38%), Positives = 51/83 (61%)

Query: 25  PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84
           P GAV V N ++++RA N+  EL D +AHAE+ A+R+G +      L    +Y +  PC+
Sbjct: 31  PFGAVLVRNGQVLARAVNQVDELCDPSAHAEMQALRIGAKAQGSTDLSGAVMYASGYPCS 90

Query: 85  MCAAAISLARIRRLYYGASNPKG 107
           MC  A+ LA ++++Y+  SN  G
Sbjct: 91  MCYTAMLLAGVKQVYFAYSNEDG 113


>gi|21228824|ref|NP_634746.1| hypothetical protein MM_2722 [Methanosarcina mazei Go1]
 gi|20907345|gb|AAM32418.1| hypothetical protein MM_2722 [Methanosarcina mazei Go1]
          Length = 161

 Score = 66.2 bits (160), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 39/106 (36%), Positives = 55/106 (51%)

Query: 11  ALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEI 70
           A+E +  +  R   P GAV V N KI+S + N+     D TAHAEI AIR   R L+   
Sbjct: 16  AIELSLESVKRGGGPFGAVIVKNGKIVSESYNQVTLHNDPTAHAEIGAIREAARKLNTFD 75

Query: 71  LPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116
           L    +Y++ EPC MC  AI  ARI ++++ ++      I     F
Sbjct: 76  LSGCSIYISCEPCPMCLGAIYWARIDKVFFASTRSDAENIGFDDSF 121


>gi|254433467|ref|ZP_05046975.1| hypothetical protein NOC27_398 [Nitrosococcus oceani AFC27]
 gi|207089800|gb|EDZ67071.1| hypothetical protein NOC27_398 [Nitrosococcus oceani AFC27]
          Length = 93

 Score = 66.2 bits (160), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 35/75 (46%), Positives = 43/75 (57%)

Query: 25 PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84
          P GAV V + +I+ RA N    L+D TAHAE+ AIRM CR  +   L    LY + EPC 
Sbjct: 19 PFGAVVVRDGEILGRACNDVIALRDPTAHAEVQAIRMACRNFNDFHLEGCALYCSCEPCP 78

Query: 85 MCAAAISLARIRRLY 99
          MC  A   ARI  +Y
Sbjct: 79 MCLGAAYWARIGWIY 93


>gi|257052125|ref|YP_003129958.1| CMP/dCMP deaminase zinc-binding [Halorhabdus utahensis DSM 12940]
 gi|256690888|gb|ACV11225.1| CMP/dCMP deaminase zinc-binding [Halorhabdus utahensis DSM 12940]
          Length = 155

 Score = 66.2 bits (160), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 41/123 (33%), Positives = 60/123 (48%), Gaps = 7/123 (5%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85
           VGA+ V N  I++       E  D TAH+EI  IR  C+ L  E L    LY T EPC M
Sbjct: 34  VGALLVKNGDIVASGTGAIFERPDATAHSEIEVIREACQRLDSERLDGCWLYSTHEPCPM 93

Query: 86  CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA------TCHHSPEIYPGISEQRSRQ 139
           C AA   ARI  + Y  ++ +    + GT F  ++      +C H PE++ G     + +
Sbjct: 94  CTAACCWARIEGVVYALTD-EDMPADWGTIFSAVSAREIRDSCEHRPELHDGFMHAEATR 152

Query: 140 IIQ 142
           ++ 
Sbjct: 153 LLH 155


>gi|237798885|ref|ZP_04587346.1| cytosine deaminase [Pseudomonas syringae pv. oryzae str. 1_6]
 gi|331021739|gb|EGI01796.1| cytosine deaminase [Pseudomonas syringae pv. oryzae str. 1_6]
          Length = 145

 Score = 66.2 bits (160), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 38/97 (39%), Positives = 50/97 (51%), Gaps = 1/97 (1%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           + FM  A EEAQ+      IP+G+V V + KII R  NR  +    T H E+ A+    R
Sbjct: 2   DAFMRAAFEEAQHGQEEGGIPIGSVIVHDGKIIGRGRNRRVQNASATLHGEMDALENAGR 61

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
                +  E  LY TL PC MC+ AI L  IR++  G
Sbjct: 62  -QPASVYREAVLYTTLSPCAMCSGAILLYGIRKVIVG 97


>gi|313635947|gb|EFS01887.1| tRNA-specific adenosine deaminase [Listeria seeligeri FSL S4-171]
          Length = 81

 Score = 66.2 bits (160), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 30/73 (41%), Positives = 45/73 (61%)

Query: 77  YVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQR 136
           YVTLEPC MC+ AI L+RI ++YYGA +PK G   +          +H+ E+  G+ E  
Sbjct: 1   YVTLEPCPMCSGAILLSRIDKVYYGAKDPKAGTAGSLMNLLQDDRFNHTCEVESGLMEAE 60

Query: 137 SRQIIQDFFKERR 149
           S ++++ FF+E R
Sbjct: 61  SSEMLKSFFQELR 73


>gi|326315881|ref|YP_004233553.1| CMP/dCMP deaminase zinc-binding protein [Acidovorax avenae subsp.
           avenae ATCC 19860]
 gi|323372717|gb|ADX44986.1| CMP/dCMP deaminase zinc-binding protein [Acidovorax avenae subsp.
           avenae ATCC 19860]
          Length = 169

 Score = 66.2 bits (160), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 39/96 (40%), Positives = 53/96 (55%), Gaps = 1/96 (1%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNN-KIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           ++  A+  A  A  R   P GAV V ++  +++ A N N E  D TAHAE  AIR+    
Sbjct: 19  YLRQAIALADKARARGNRPFGAVIVGDDGTVLAEAWNANGETGDCTAHAETSAIRVASPR 78

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
            ++E+L    LY + EPC MCA AI  A I R+ YG
Sbjct: 79  HAREVLARATLYSSGEPCVMCAGAIFWANIGRVVYG 114


>gi|324529700|gb|ADY49034.1| Guanine deaminase [Ascaris suum]
          Length = 153

 Score = 66.2 bits (160), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 41/101 (40%), Positives = 52/101 (51%), Gaps = 2/101 (1%)

Query: 7   FMSCALEEA-QNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           FM  A++EA Q     +  P GAV V NN II+   N   +  D TAHAEI AIR  C  
Sbjct: 3   FMRKAIDEACQGVDNGDGGPFGAVIVRNNSIIATGHNMVLKTNDPTAHAEITAIRNACSA 62

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPK 106
           L    L    LY +  PC MC  A   +R+  +YY A+ P+
Sbjct: 63  LGTFDLSGCQLYTSCYPCPMCMGAALWSRVNAIYY-ATTPE 102


>gi|222445686|ref|ZP_03608201.1| hypothetical protein METSMIALI_01327 [Methanobrevibacter smithii
           DSM 2375]
 gi|222435251|gb|EEE42416.1| hypothetical protein METSMIALI_01327 [Methanobrevibacter smithii
           DSM 2375]
          Length = 158

 Score = 66.2 bits (160), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 41/101 (40%), Positives = 54/101 (53%), Gaps = 1/101 (0%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M     F++ AL EA+ +     IP+GAV V + KIISR  NR  +   V  HAEI  I 
Sbjct: 1   MYDDTYFINEALNEAKKSLAEGGIPIGAVLVKDGKIISRGHNRLIQNDSVILHAEIDTIE 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
              R+  ++ L  V LY TL PC MC+ AI L  I ++  G
Sbjct: 61  NAGRLNHEDYLQSV-LYTTLSPCPMCSGAILLYNIPKVVIG 100


>gi|264677007|ref|YP_003276913.1| CMP/dCMP deaminase, zinc-binding protein [Comamonas testosteroni
           CNB-2]
 gi|262207519|gb|ACY31617.1| CMP/dCMP deaminase, zinc-binding protein [Comamonas testosteroni
           CNB-2]
          Length = 164

 Score = 66.2 bits (160), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 32/83 (38%), Positives = 51/83 (61%)

Query: 25  PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84
           P GAV V + K+++RA N+  +L D TAHAE+ A+R+  + L    L    +Y +  PC+
Sbjct: 30  PFGAVLVRDGKVLARAVNQVDDLCDPTAHAEMQALRIAAKALGSTDLSGAVMYASGYPCS 89

Query: 85  MCAAAISLARIRRLYYGASNPKG 107
           MC  A+ LA ++++Y+  SN  G
Sbjct: 90  MCHTAMLLAGVKQVYFAYSNEDG 112


>gi|256423014|ref|YP_003123667.1| CMP/dCMP deaminase zinc-binding [Chitinophaga pinensis DSM 2588]
 gi|256037922|gb|ACU61466.1| CMP/dCMP deaminase zinc-binding [Chitinophaga pinensis DSM 2588]
          Length = 159

 Score = 66.2 bits (160), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 33/95 (34%), Positives = 54/95 (56%), Gaps = 1/95 (1%)

Query: 7   FMSCALEEAQNAALRNEI-PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           FM  A++ ++    + +  P GA+ V   +I+ R  N+     D TAHAE++AIR  C  
Sbjct: 9   FMQMAVDLSREGMEKGDGGPFGAIVVRGEEIVGRGWNQVLSFNDPTAHAEVVAIRDACAN 68

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
           L+   L + +++ + EPC MC  AI  AR +R+Y+
Sbjct: 69  LNTFQLHDCEIFTSCEPCPMCLGAIYWARPQRVYF 103


>gi|299532967|ref|ZP_07046354.1| CMP/dCMP deaminase, zinc-binding protein [Comamonas testosteroni
           S44]
 gi|298719191|gb|EFI60161.1| CMP/dCMP deaminase, zinc-binding protein [Comamonas testosteroni
           S44]
          Length = 166

 Score = 66.2 bits (160), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 38/92 (41%), Positives = 53/92 (57%), Gaps = 1/92 (1%)

Query: 11  ALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQE 69
           A+  A  A  R   P GA+ V  + ++++RA N N E  D TAHAE+ AIR+   + S++
Sbjct: 20  AIALADTARERGNRPFGALIVAADGRVLARASNANGESGDCTAHAELSAIRLASPLHSRD 79

Query: 70  ILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
            L    LY + EPC MCA AI  + I R+ YG
Sbjct: 80  ELAVATLYSSAEPCVMCAGAIFWSAIGRVVYG 111


>gi|320108633|ref|YP_004184223.1| Guanine deaminase [Terriglobus saanensis SP1PR4]
 gi|319927154|gb|ADV84229.1| Guanine deaminase [Terriglobus saanensis SP1PR4]
          Length = 161

 Score = 66.2 bits (160), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 33/77 (42%), Positives = 42/77 (54%)

Query: 25  PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84
           P G V V + ++I+   N      D TAHAE+ AIR  C  L    L   D+Y + EPC 
Sbjct: 30  PFGCVIVRDGEVIAARANSVTATNDPTAHAEVNAIRAACAALGTFQLTGCDVYTSCEPCP 89

Query: 85  MCAAAISLARIRRLYYG 101
           MC AAI  AR R +Y+G
Sbjct: 90  MCLAAIYWARCRSIYFG 106


>gi|120609775|ref|YP_969453.1| CMP/dCMP deaminase [Acidovorax citrulli AAC00-1]
 gi|120588239|gb|ABM31679.1| CMP/dCMP deaminase, zinc-binding protein [Acidovorax citrulli
           AAC00-1]
          Length = 169

 Score = 65.9 bits (159), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 39/96 (40%), Positives = 52/96 (54%), Gaps = 1/96 (1%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNN-KIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           ++  A+  A  A  R   P GAV V  +  +++ A N N E  D TAHAE  AIR+    
Sbjct: 19  YLRHAIALADKARARGNRPFGAVIVGGDGTVLAEAWNANGETGDCTAHAETSAIRVASPQ 78

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
            ++E+L    LY + EPC MCA AI  A I R+ YG
Sbjct: 79  HAREVLARATLYSSGEPCVMCAGAIFWANIGRVVYG 114


>gi|94263921|ref|ZP_01287724.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [delta
           proteobacterium MLMS-1]
 gi|94264246|ref|ZP_01288041.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [delta
           proteobacterium MLMS-1]
 gi|93455357|gb|EAT05561.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [delta
           proteobacterium MLMS-1]
 gi|93455666|gb|EAT05845.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [delta
           proteobacterium MLMS-1]
          Length = 184

 Score = 65.9 bits (159), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 53/165 (32%), Positives = 76/165 (46%), Gaps = 31/165 (18%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKII-------SRAGNRNRELKDVTA------- 52
           +M  AL+EA+ A    E PVGA+     +++       SR         D TA       
Sbjct: 8   WMGMALDEARGALAAGEFPVGAIIAHQGQMVASGRRQHSRGAAGPVAAPDTTATEVANEL 67

Query: 53  -HAEILAIRMGCRILSQEILPEVD-----LYVTLEPCTMCAAAISLARIRRLYYGASNPK 106
            HAE+LA+R   ++LS+   P  D     LY TLEPC MC AA+ L  +RR+ Y   +  
Sbjct: 68  DHAEMLALR---QLLSRH--PTADRRGLTLYATLEPCLMCYAALLLNGVRRIVYAYEDAM 122

Query: 107 GGGIENGTQFYTLATCHH----SPEIYPGISEQRSRQIIQDFFKE 147
           GGG   G     LA  +     + EI P +  + S  + + FF +
Sbjct: 123 GGG--TGLPLAELAPLYRQMAPAVEIIPHLRRRESLALFKQFFND 165


>gi|295133748|ref|YP_003584424.1| guanine deaminase [Zunongwangia profunda SM-A87]
 gi|294981763|gb|ADF52228.1| guanine deaminase [Zunongwangia profunda SM-A87]
          Length = 158

 Score = 65.9 bits (159), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 36/92 (39%), Positives = 47/92 (51%)

Query: 25  PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84
           P GAV V + +II+   N      D TAHAEI AIR  C  L+   L    LY + EPC 
Sbjct: 27  PFGAVVVKDGEIIAEGWNIVTSSNDPTAHAEITAIRRACENLNTFQLENCVLYTSCEPCP 86

Query: 85  MCAAAISLARIRRLYYGASNPKGGGIENGTQF 116
           MC  AI  AR ++++Y  ++     I    QF
Sbjct: 87  MCLGAIYWARPKKVFYALNHSDAAKIGFDDQF 118


>gi|152988290|ref|YP_001348100.1| putative deaminase [Pseudomonas aeruginosa PA7]
 gi|150963448|gb|ABR85473.1| probable deaminase [Pseudomonas aeruginosa PA7]
          Length = 151

 Score = 65.9 bits (159), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 32/83 (38%), Positives = 47/83 (56%)

Query: 25  PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84
           P GAV V + ++++R  N+  E  D +AHAE+ AIR   R+L    L   ++Y +  PC 
Sbjct: 24  PFGAVLVRDGQVLARGVNQTHESHDPSAHAELQAIRQASRLLGSPRLDGCEIYASGHPCP 83

Query: 85  MCAAAISLARIRRLYYGASNPKG 107
           MC AA+ L  IR  ++  SN  G
Sbjct: 84  MCLAAMHLCGIRAAWFAYSNEDG 106


>gi|198426798|ref|XP_002125101.1| PREDICTED: similar to deaminase domain containing 1 [Ciona
           intestinalis]
          Length = 178

 Score = 65.9 bits (159), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 45/160 (28%), Positives = 78/160 (48%), Gaps = 19/160 (11%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNK-IISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           +M+ A   A++A    E+PVG V V  NK  +S   N+  E K+ T HAE++AI    + 
Sbjct: 9   WMNEAFNYAEDALKEGEVPVGCVLVYKNKEKLSNGRNKVNETKNATRHAELVAIDNAIKT 68

Query: 66  LSQE--------------ILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIE 111
           ++ +              +     +YVT+EPC MC  A+   +I  + +G +N + GG  
Sbjct: 69  VTSDSWKQSLPNDWKFTDVFEHCVMYVTVEPCIMCCGAMRAMKIPLVVFGCNNERFGGCG 128

Query: 112 NGTQFYTLATCHHS--PEI--YPGISEQRSRQIIQDFFKE 147
           +    ++    + S  P I  Y G    R+  +++DF+K+
Sbjct: 129 SVLSLHSNRKLNSSLGPVISTYGGQQTVRAITLLKDFYKQ 168


>gi|162451647|ref|YP_001614014.1| cytidine/deoxycytidylate deaminase [Sorangium cellulosum 'So ce
           56']
 gi|161162229|emb|CAN93534.1| Cytidine/deoxycytidylate deaminase [Sorangium cellulosum 'So ce
           56']
          Length = 151

 Score = 65.9 bits (159), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 39/104 (37%), Positives = 54/104 (51%), Gaps = 2/104 (1%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGA-VAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
           M +    M  ALE A+ A    E P GA VA  +  +++ A +     +D T HAE+ A+
Sbjct: 1   MSRDEALMGRALELARGAQRAGEPPFGALVAAPDGAVVAEATDEVNAQRDFTWHAEVGAV 60

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
           R  C  +  + L    LY T+EPC MC  A  LARI R+ YG +
Sbjct: 61  RRACAAVGPD-LQGYTLYTTVEPCPMCFTAAWLARISRIVYGCT 103


>gi|294674240|ref|YP_003574856.1| guanine deaminase [Prevotella ruminicola 23]
 gi|294472550|gb|ADE81939.1| guanine deaminase [Prevotella ruminicola 23]
          Length = 158

 Score = 65.9 bits (159), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 39/110 (35%), Positives = 53/110 (48%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  A+  A  +  R   P GAV V + +II+ + N      D TAHAE+  IR  C  L
Sbjct: 9   FMREAIRLANESVERGGGPFGAVIVKDGEIIAGSSNSVTIDNDPTAHAEVNTIRKACFKL 68

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116
               L    +Y + EPC MC  AI  ARI +++YG +      I+    F
Sbjct: 69  RTFDLSGCTIYTSCEPCPMCLGAIYWARIGKIFYGNTRKDARDIQFADDF 118


>gi|300727400|ref|ZP_07060809.1| cytidine/deoxycytidylate deaminase family protein [Prevotella
           bryantii B14]
 gi|299775280|gb|EFI71879.1| cytidine/deoxycytidylate deaminase family protein [Prevotella
           bryantii B14]
          Length = 155

 Score = 65.9 bits (159), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 38/110 (34%), Positives = 51/110 (46%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  A+  ++N+      P GAV V + +I++ A N      D TAHAEI  IR   +IL
Sbjct: 6   FMRRAIALSENSVKTGGGPFGAVIVKDGEIVAEASNSVTIDNDPTAHAEINCIRKATKIL 65

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116
               L   D+Y + EPC MC  AI  A +  +YY         I     F
Sbjct: 66  KSFDLAGCDIYTSCEPCPMCLGAIYWAHLDHIYYANDRKDAAKIGFDDDF 115


>gi|299532573|ref|ZP_07045963.1| CMP/dCMP deaminase, zinc-binding protein [Comamonas testosteroni
           S44]
 gi|298719520|gb|EFI60487.1| CMP/dCMP deaminase, zinc-binding protein [Comamonas testosteroni
           S44]
          Length = 164

 Score = 65.5 bits (158), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 32/83 (38%), Positives = 51/83 (61%)

Query: 25  PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84
           P GAV V + K+++RA N+  +L D TAHAE+ A+R+  + L    L    +Y +  PC+
Sbjct: 30  PFGAVLVRDGKVLARAVNQVDDLCDPTAHAEMQALRIAAKALGSTDLSGSVMYASGYPCS 89

Query: 85  MCAAAISLARIRRLYYGASNPKG 107
           MC  A+ LA ++++Y+  SN  G
Sbjct: 90  MCHTAMLLAGVKQVYFAYSNEDG 112


>gi|325279197|ref|YP_004251739.1| Guanine deaminase [Odoribacter splanchnicus DSM 20712]
 gi|324311006|gb|ADY31559.1| Guanine deaminase [Odoribacter splanchnicus DSM 20712]
          Length = 156

 Score = 65.5 bits (158), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 35/80 (43%), Positives = 43/80 (53%)

Query: 25  PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84
           P GAV V   KII+   N      D TAHAE+ AIR  CR L    L   ++Y + EPC 
Sbjct: 25  PFGAVVVKEGKIIAACANTVTPDCDPTAHAEVNAIREACRKLDTFQLGGCEIYASCEPCP 84

Query: 85  MCAAAISLARIRRLYYGASN 104
           MC  AI  AR  R+YY ++ 
Sbjct: 85  MCLGAIYWARPSRVYYASTK 104


>gi|119394655|gb|ABL74489.1| putative cytidine deaminase [Zea mays]
 gi|119394657|gb|ABL74490.1| putative cytidine deaminase [Zea mays]
          Length = 186

 Score = 65.5 bits (158), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 40/101 (39%), Positives = 61/101 (60%), Gaps = 1/101 (0%)

Query: 3   KGNVFMSCALEEA-QNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           K + F++ A+EEA +     +  P GAV V N++++    N   +  D TAHAE+ AIR 
Sbjct: 30  KDHKFLTKAVEEAYRGVDCGDGGPFGAVVVRNDEVVVSCHNMVLKHTDPTAHAEVTAIRE 89

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGA 102
            C+ L +  L + ++Y + EPC MC  A+ L+RI+RL YGA
Sbjct: 90  ACKKLGKIELSDCEIYASCEPCPMCFGAVHLSRIKRLVYGA 130


>gi|83815475|ref|YP_446616.1| putative cytidine and deoxycytidylate deaminase [Salinibacter ruber
           DSM 13855]
 gi|83756869|gb|ABC44982.1| putative cytidine and deoxycytidylate deaminase [Salinibacter ruber
           DSM 13855]
          Length = 221

 Score = 65.5 bits (158), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 37/96 (38%), Positives = 49/96 (51%), Gaps = 1/96 (1%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           F+  A++EA +A      P GAV V     ++ RAGN      D T HAE   +R   + 
Sbjct: 76  FVRAAIDEAGSAQDAGNPPFGAVLVGPGGTVLDRAGNTEGRTGDCTGHAETNLVRAASQE 135

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
              E L +  LY + EPC MCA AI  ARI R+ +G
Sbjct: 136 YDPERLAKATLYASTEPCAMCAGAIFWARIGRVVFG 171


>gi|260909908|ref|ZP_05916596.1| guanine deaminase [Prevotella sp. oral taxon 472 str. F0295]
 gi|260635953|gb|EEX53955.1| guanine deaminase [Prevotella sp. oral taxon 472 str. F0295]
          Length = 155

 Score = 65.5 bits (158), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 35/92 (38%), Positives = 45/92 (48%)

Query: 25  PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84
           P GAV   N +I++ A NR     D TAHAE+ AIR+  R L    L   D+Y + EPC 
Sbjct: 24  PFGAVIARNGEIVAEAANRVTLDHDPTAHAEVSAIRLASRKLGTFNLSGCDIYTSCEPCP 83

Query: 85  MCAAAISLARIRRLYYGASNPKGGGIENGTQF 116
           MC  AI  A +  +YY  +      I     F
Sbjct: 84  MCLGAIYWAHLDNIYYANNREDAANIGFDDDF 115


>gi|296329638|ref|ZP_06872123.1| guanine deaminase [Bacillus subtilis subsp. spizizenii ATCC 6633]
 gi|305674035|ref|YP_003865707.1| guanine deaminase [Bacillus subtilis subsp. spizizenii str. W23]
 gi|296153136|gb|EFG94000.1| guanine deaminase [Bacillus subtilis subsp. spizizenii ATCC 6633]
 gi|305412279|gb|ADM37398.1| guanine deaminase [Bacillus subtilis subsp. spizizenii str. W23]
          Length = 156

 Score = 65.5 bits (158), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 33/80 (41%), Positives = 43/80 (53%)

Query: 25  PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84
           P GA+ V +  II+   N      D TAHAE+ AIR  C+ L    L +  LY + EPC 
Sbjct: 25  PFGALIVKDGSIIAEGQNNVTTSNDPTAHAEVTAIRNACKALGTFQLDDCILYTSCEPCP 84

Query: 85  MCAAAISLARIRRLYYGASN 104
           MC  AI  AR + +YY A +
Sbjct: 85  MCLGAIYWARPKAVYYAAEH 104


>gi|29830136|ref|NP_824770.1| hypothetical protein SAV_3593 [Streptomyces avermitilis MA-4680]
 gi|29607246|dbj|BAC71305.1| hypothetical protein [Streptomyces avermitilis MA-4680]
          Length = 151

 Score = 65.5 bits (158), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 33/90 (36%), Positives = 49/90 (54%)

Query: 15  AQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEV 74
           A+ AA      +GAV +   ++I ++G++  +  D T H EI AIR     L    LP+ 
Sbjct: 8   AREAATTGNYALGAVVIKGGQVIGKSGSKLVQGNDPTGHPEITAIRQAAERLGSRYLPDA 67

Query: 75  DLYVTLEPCTMCAAAISLARIRRLYYGASN 104
            L  TLEPC MC +A   A++R + YGA+ 
Sbjct: 68  YLVTTLEPCPMCTSAAIWAKMRGIAYGATQ 97


>gi|332185432|ref|ZP_08387180.1| cytidine and deoxycytidylate deaminase zinc-binding region family
           protein [Sphingomonas sp. S17]
 gi|332014410|gb|EGI56467.1| cytidine and deoxycytidylate deaminase zinc-binding region family
           protein [Sphingomonas sp. S17]
          Length = 164

 Score = 65.5 bits (158), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 31/78 (39%), Positives = 46/78 (58%)

Query: 25  PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84
           P+G V V   ++++   N+  EL D TAHAE++AIR  C  +    L +  LY TL+PC 
Sbjct: 28  PLGCVIVRGGQVLAAERNQTHELPDATAHAEMMAIRRACESVGDLELRDATLYSTLQPCG 87

Query: 85  MCAAAISLARIRRLYYGA 102
           MC  A   +++ R+ YGA
Sbjct: 88  MCTMASIWSKVGRVVYGA 105


>gi|189218057|ref|YP_001938699.1| Cytosine/adenosine deaminase [Methylacidiphilum infernorum V4]
 gi|189184915|gb|ACD82100.1| Cytosine/adenosine deaminase [Methylacidiphilum infernorum V4]
          Length = 168

 Score = 65.5 bits (158), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 44/122 (36%), Positives = 63/122 (51%), Gaps = 3/122 (2%)

Query: 2   KKGNVFMSCALEEAQNAALRNEI-PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +K N ++  AL+ AQ  + + E  P GAV VL  + I  A N      D TAHAEILAI+
Sbjct: 13  EKHNYWLRLALKLAQYGSEQGEGGPFGAVVVLQEEAIGLAHNEVLSRLDPTAHAEILAIQ 72

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY--GASNPKGGGIENGTQFYT 118
              + +S   L    +Y + EPC MC +AI  A I ++YY  G  + +G G  +   +  
Sbjct: 73  RAAKKISHFDLEGSIIYTSCEPCPMCLSAIYWAGISKVYYACGKEDVQGIGFRDAFLYEE 132

Query: 119 LA 120
           L 
Sbjct: 133 LG 134


>gi|255075667|ref|XP_002501508.1| cytidine/deoxycytidylate deaminase family protein [Micromonas sp.
           RCC299]
 gi|226516772|gb|ACO62766.1| cytidine/deoxycytidylate deaminase family protein [Micromonas sp.
           RCC299]
          Length = 164

 Score = 65.5 bits (158), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 37/86 (43%), Positives = 51/86 (59%), Gaps = 3/86 (3%)

Query: 22  NEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS-QEILPEVDLYV 78
           +E+PVGAV V   + K++S   N      D TAHAE+  +R G ++L     L +  LYV
Sbjct: 15  DEVPVGAVLVHTASGKVLSSHHNTVLAQDDPTAHAEMKCVRDGAKVLGGWRYLRDATLYV 74

Query: 79  TLEPCTMCAAAISLARIRRLYYGASN 104
           TLEPC MCA A+  AR+  + +GA N
Sbjct: 75  TLEPCPMCAGAVLNARLGAVVWGAPN 100


>gi|91201071|emb|CAJ74129.1| strongly similar to fungal cytosine deaminase [Candidatus Kuenenia
           stuttgartiensis]
          Length = 145

 Score = 65.5 bits (158), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 46/140 (32%), Positives = 69/140 (49%), Gaps = 12/140 (8%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  A+EEA+   L   IP+G+V V + +II R  N+  +  +  AHAEI  +    R+ 
Sbjct: 4   FMRTAIEEAKQGLLEGGIPIGSVLVKDGEIIGRGHNKRVQENNPIAHAEIDCLVNSGRVG 63

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
                    LY TL PC +CA AI   RI+++  G S    G  E    F  L    H  
Sbjct: 64  K---YSGTTLYSTLMPCYLCAGAIVQFRIKKIVVGESETFSGAKE----FMEL----HGV 112

Query: 127 EIYPGISEQRSRQIIQDFFK 146
           EI   ++ +  +Q+++DF +
Sbjct: 113 EIID-LNIEECKQLMKDFIQ 131


>gi|50365494|ref|YP_053919.1| cytosine deaminase [Mesoplasma florum L1]
 gi|50364050|gb|AAT76035.1| cytosine deaminase [Mesoplasma florum L1]
          Length = 142

 Score = 65.5 bits (158), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 38/131 (29%), Positives = 65/131 (49%), Gaps = 11/131 (8%)

Query: 23  EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEP 82
           +IPV +  + +NKI+ ++ N + ++K +T HAEI  +    + + +  L E  L+ TLEP
Sbjct: 19  DIPVFSCLIKDNKIVFKSKNNSYKIKKITGHAEINVMNKAFKKIKKGNLSEYTLFTTLEP 78

Query: 83  CTMCAAAISLARIRRLYYGASNPKGGGIENGTQF----YTLATCHHSPEIYPGISEQRSR 138
           C MC  AI  A+I+ + Y   N K     N          +    H         + + +
Sbjct: 79  CLMCYGAIKQAKIKEIIYLTENVK-LSFRNDVNIDQIKINIRKLDHEE------LQSKYQ 131

Query: 139 QIIQDFFKERR 149
           +II DFF+++R
Sbjct: 132 KIISDFFQKKR 142


>gi|221068807|ref|ZP_03544912.1| CMP/dCMP deaminase zinc-binding [Comamonas testosteroni KF-1]
 gi|220713830|gb|EED69198.1| CMP/dCMP deaminase zinc-binding [Comamonas testosteroni KF-1]
          Length = 162

 Score = 65.5 bits (158), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 32/83 (38%), Positives = 51/83 (61%)

Query: 25  PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84
           P GAV V + +I++RA N+  EL D +AHAE+ A+R+G +      L    +Y +  PC+
Sbjct: 31  PFGAVLVRDGQILARAVNQVDELCDPSAHAEMQALRIGAKAQGSTDLSGAVMYASGYPCS 90

Query: 85  MCAAAISLARIRRLYYGASNPKG 107
           MC  A+ LA ++++Y+  SN  G
Sbjct: 91  MCYTAMLLAGVKQVYFAYSNEDG 113


>gi|115955248|ref|XP_001190079.1| PREDICTED: similar to DEADC1 protein [Strongylocentrotus
           purpuratus]
          Length = 108

 Score = 65.5 bits (158), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 35/92 (38%), Positives = 50/92 (54%), Gaps = 6/92 (6%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  A+  A+ A  R E+PVG + V  ++II   GN   E K+ T HAEILA+    R  
Sbjct: 12  WMKEAVNMAKQALGRGEVPVGCLLVYEDQIIGTGGNAANETKNATRHAEILALEEAMRWC 71

Query: 67  SQ------EILPEVDLYVTLEPCTMCAAAISL 92
                   E+  +  L+VT+EPC MCA A+ +
Sbjct: 72  DDKQLERGELFSQTKLFVTVEPCIMCAGALRI 103


>gi|27381264|ref|NP_772793.1| hypothetical protein blr6153 [Bradyrhizobium japonicum USDA 110]
 gi|27354431|dbj|BAC51418.1| blr6153 [Bradyrhizobium japonicum USDA 110]
          Length = 159

 Score = 65.5 bits (158), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 40/105 (38%), Positives = 53/105 (50%), Gaps = 1/105 (0%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           F+  +   A+ +      P G V V  + K++    N      D TAHAE LA    CR 
Sbjct: 9   FLRLSFAVARRSLTHGNHPFGCVVVAADGKVLIETENGYMPDCDGTAHAERLAATQACRT 68

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI 110
           LS+E+L E  LY + EPC MCA AI  A I R+ YG S  +  G+
Sbjct: 69  LSREVLAEATLYSSAEPCAMCAGAIYWAGIGRVVYGLSEHRLRGV 113


>gi|330942469|gb|EGH45066.1| cytosine deaminase [Pseudomonas syringae pv. pisi str. 1704B]
          Length = 145

 Score = 65.1 bits (157), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 38/97 (39%), Positives = 49/97 (50%), Gaps = 1/97 (1%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           + FM  AL+EAQ       IP+G+V V   KII R  NR  +    T H EI A+    R
Sbjct: 2   DAFMQAALDEAQLGLKEGGIPIGSVIVHGGKIIGRGHNRRVQEGSATKHGEIDALENAGR 61

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
                +  +  LY TL PC MC+ AI L  IR++  G
Sbjct: 62  -QPASVYRDSVLYTTLSPCAMCSGAILLYGIRKVIIG 97


>gi|297622621|ref|YP_003704055.1| CMP/dCMP deaminase zinc-binding protein [Truepera radiovictrix DSM
           17093]
 gi|297163801|gb|ADI13512.1| CMP/dCMP deaminase zinc-binding protein [Truepera radiovictrix DSM
           17093]
          Length = 153

 Score = 65.1 bits (157), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 43/137 (31%), Positives = 65/137 (47%), Gaps = 8/137 (5%)

Query: 15  AQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEV 74
           A   A R +   GAV V    +++ A N   + +D +AHAE+  IR  CR L    L   
Sbjct: 19  AAEVAERGQTMFGAVLVRGGALLAEAANTVAKDRDPSAHAELSLIRRACRELVTTDLDGC 78

Query: 75  DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT------CHHSPEI 128
            LY T+EPC MCAAA   + +  + +GAS  +    E G     L+         H+P +
Sbjct: 79  TLYTTVEPCPMCAAACVWSGVSGVVFGASIAEVA--ELGVPQIALSCEELFGRVQHAPTL 136

Query: 129 YPGISEQRSRQIIQDFF 145
             G+  +R  ++ Q F+
Sbjct: 137 RGGVERERCLELCQRFW 153


>gi|115713119|ref|XP_781669.2| PREDICTED: similar to DEADC1 protein, partial [Strongylocentrotus
           purpuratus]
          Length = 104

 Score = 65.1 bits (157), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 35/92 (38%), Positives = 50/92 (54%), Gaps = 6/92 (6%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  A+  A+ A  R E+PVG + V  ++II   GN   E K+ T HAEILA+    R  
Sbjct: 12  WMKEAVNMAKQALGRGEVPVGCLLVYEDQIIGTGGNAANETKNATRHAEILALEEAMRWC 71

Query: 67  SQ------EILPEVDLYVTLEPCTMCAAAISL 92
                   E+  +  L+VT+EPC MCA A+ +
Sbjct: 72  DDKQLERGELFSQTKLFVTVEPCIMCAGALRI 103


>gi|294508554|ref|YP_003572613.1| Conserved hypothetical protein containing cytidine and
           deoxycytidylate deaminase zinc-binding protein
           [Salinibacter ruber M8]
 gi|294344883|emb|CBH25661.1| Conserved hypothetical protein containing cytidine and
           deoxycytidylate deaminase zinc-binding protein
           [Salinibacter ruber M8]
          Length = 158

 Score = 65.1 bits (157), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 37/96 (38%), Positives = 49/96 (51%), Gaps = 1/96 (1%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           F+  A++EA +A      P GAV V     ++ RAGN      D T HAE   +R   + 
Sbjct: 13  FVRAAIDEAASAQDAGNPPFGAVLVGPGGTVLDRAGNTEGRTGDCTGHAETNLVRAASQE 72

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
              E L +  LY + EPC MCA AI  ARI R+ +G
Sbjct: 73  YDPERLAKATLYASTEPCAMCAGAIFWARIGRVVFG 108


>gi|187780095|ref|ZP_02996568.1| hypothetical protein CLOSPO_03691 [Clostridium sporogenes ATCC
           15579]
 gi|187773720|gb|EDU37522.1| hypothetical protein CLOSPO_03691 [Clostridium sporogenes ATCC
           15579]
          Length = 157

 Score = 65.1 bits (157), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 33/79 (41%), Positives = 45/79 (56%)

Query: 25  PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84
           P G+  V + K+I+ A N      D TAH E+ AIR  C+ L+   L   +LY T EPC 
Sbjct: 25  PFGSAIVKDGKVIAVAHNTVIGDNDPTAHGEVNAIRQACKKLNTFDLSGCELYTTSEPCP 84

Query: 85  MCAAAISLARIRRLYYGAS 103
           MC +AI  A I ++YYG +
Sbjct: 85  MCMSAIIWANISKVYYGCT 103


>gi|303237160|ref|ZP_07323730.1| guanine deaminase [Prevotella disiens FB035-09AN]
 gi|302482547|gb|EFL45572.1| guanine deaminase [Prevotella disiens FB035-09AN]
          Length = 155

 Score = 65.1 bits (157), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 37/110 (33%), Positives = 50/110 (45%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
            M  A+E ++N+      P GAV   + +II+   NR     D TAHAE+  IR  C  L
Sbjct: 6   LMRRAIELSENSVRNGGGPFGAVIAKDGEIIAEGSNRVTIDNDPTAHAEVCTIRKACEKL 65

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116
               L    +Y + EPC MC  AI  A + ++YY       G I     F
Sbjct: 66  GTFDLKGCVIYTSCEPCPMCFGAIYWAHLEKIYYANDRKDAGKIGFDDDF 115


>gi|255641124|gb|ACU20840.1| unknown [Glycine max]
          Length = 168

 Score = 65.1 bits (157), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 42/97 (43%), Positives = 60/97 (61%), Gaps = 1/97 (1%)

Query: 7   FMSCALEEA-QNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           F++ A+EEA +     +  P GAV VLN++++    N      D TAHAE+ AIR  C+ 
Sbjct: 41  FLTKAVEEAYKGVECGDGGPFGAVVVLNDEVVVSCHNMVLRNTDPTAHAEVTAIREACQK 100

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGA 102
           L+Q  L + ++Y + EPC MC  AI L+RI+RL YGA
Sbjct: 101 LNQIELADCEIYASCEPCPMCFGAIHLSRIKRLVYGA 137


>gi|55981511|ref|YP_144808.1| cell cycle protein MesJ [Thermus thermophilus HB8]
 gi|61217197|sp|Q5SI38|TILS_THET8 RecName: Full=tRNA(Ile)-lysidine synthase; AltName:
           Full=tRNA(Ile)-2-lysyl-cytidine synthase; AltName:
           Full=tRNA(Ile)-lysidine synthetase
 gi|55772924|dbj|BAD71365.1| probable cell cycle protein MesJ [Thermus thermophilus HB8]
          Length = 507

 Score = 65.1 bits (157), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 50/130 (38%), Positives = 69/130 (53%), Gaps = 22/130 (16%)

Query: 23  EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVD---LYVT 79
           E+PVGAV VL  +++ RA NR   L+D TAHAE+L +R        E  PE     LYVT
Sbjct: 391 EVPVGAVLVLPGRVL-RAHNRVEGLRDPTAHAEMLLLR--------EAGPEARGGRLYVT 441

Query: 80  LEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139
           LEPC MC  A++ A +  + YGA N K G +      + L T         G+ E+   +
Sbjct: 442 LEPCLMCHHALAQAGV-EVVYGAENLKEGALTR----FGLPT-----RARGGVRERECAK 491

Query: 140 IIQDFFKERR 149
           +++DFF   R
Sbjct: 492 LLRDFFARLR 501


>gi|46199478|ref|YP_005145.1| putative cell cycle protein mesJ-like protein [Thermus thermophilus
           HB27]
 gi|61217297|sp|Q72IF6|TILS_THET2 RecName: Full=tRNA(Ile)-lysidine synthase; AltName:
           Full=tRNA(Ile)-2-lysyl-cytidine synthase; AltName:
           Full=tRNA(Ile)-lysidine synthetase
 gi|46197104|gb|AAS81518.1| putative cell cycle protein mesJ-like protein [Thermus thermophilus
           HB27]
          Length = 507

 Score = 65.1 bits (157), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 50/130 (38%), Positives = 69/130 (53%), Gaps = 22/130 (16%)

Query: 23  EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVD---LYVT 79
           E+PVGAV VL  +++ RA NR   L+D TAHAE+L +R        E  PE     LYVT
Sbjct: 391 EVPVGAVLVLPGRVL-RAHNRVEGLRDPTAHAEMLLLR--------EAGPEARGGRLYVT 441

Query: 80  LEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139
           LEPC MC  A++ A +  + YGA N K G +      + L T         G+ E+   +
Sbjct: 442 LEPCLMCHHALAQAGV-EVVYGAENLKEGALTR----FGLPT-----RARGGVRERECAK 491

Query: 140 IIQDFFKERR 149
           +++DFF   R
Sbjct: 492 LLRDFFARLR 501


>gi|182416349|ref|YP_001821415.1| CMP/dCMP deaminase zinc-binding [Opitutus terrae PB90-1]
 gi|177843563|gb|ACB77815.1| CMP/dCMP deaminase zinc-binding [Opitutus terrae PB90-1]
          Length = 183

 Score = 65.1 bits (157), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 35/92 (38%), Positives = 46/92 (50%)

Query: 25  PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84
           P G V V   +I++R  NR     D TAHAE+ AIR   + L    L + +LY + EPC 
Sbjct: 52  PFGCVIVRRGEIVARGQNRVTSTNDPTAHAEVTAIREAAQRLGTFQLGDCELYTSCEPCP 111

Query: 85  MCAAAISLARIRRLYYGASNPKGGGIENGTQF 116
           MC +AI  ARI  +YY  +      I     F
Sbjct: 112 MCLSAIYWARIPTVYYANTRKDAAAIGFDDDF 143


>gi|297570280|ref|YP_003691624.1| Guanine deaminase [Desulfurivibrio alkaliphilus AHT2]
 gi|296926195|gb|ADH87005.1| Guanine deaminase [Desulfurivibrio alkaliphilus AHT2]
          Length = 156

 Score = 65.1 bits (157), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 45/129 (34%), Positives = 58/129 (44%), Gaps = 13/129 (10%)

Query: 25  PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84
           P  A+ V +++II R  NR     D TAHAE+ AIR  C  +    L    LYV  EPC 
Sbjct: 25  PFAALVVRDHEIIGRGWNRVTSANDPTAHAEVEAIRAACAQVGDFSLAGCTLYVNCEPCP 84

Query: 85  MCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIY--PGISEQRSRQIIQ 142
           MC AA   A I ++YY A       I         A  H   E+   P      +RQ+++
Sbjct: 85  MCLAAAYWAGIEQIYYAADRHDAAAI-------GFADLHIYEELTRPPAKRSIPTRQLLR 137

Query: 143 D----FFKE 147
           D     FKE
Sbjct: 138 DKALPLFKE 146


>gi|222624837|gb|EEE58969.1| hypothetical protein OsJ_10660 [Oryza sativa Japonica Group]
          Length = 169

 Score = 65.1 bits (157), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/134 (36%), Positives = 65/134 (48%), Gaps = 23/134 (17%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  ALE+A+ A    E+PVG V V + K               T HAE+ AI +  R  
Sbjct: 8   FMELALEQAKFALDNLEVPVGCVIVEDGK--------------ATRHAEMEAIDILLREW 53

Query: 67  SQEIL--PEV-------DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFY 117
               L  P+V       DLYVT EPC MCA A+S+  IR +Y+G +N K GG  +    +
Sbjct: 54  QGMGLDQPQVAEKFARCDLYVTCEPCIMCAMALSILGIREVYFGCANDKFGGCGSIMSLH 113

Query: 118 TLATCHHSPEIYPG 131
             ++   S E  PG
Sbjct: 114 QSSSAELSGEEIPG 127


>gi|299531573|ref|ZP_07044979.1| CMP/dCMP deaminase, zinc-binding protein [Comamonas testosteroni
           S44]
 gi|298720536|gb|EFI61487.1| CMP/dCMP deaminase, zinc-binding protein [Comamonas testosteroni
           S44]
          Length = 162

 Score = 65.1 bits (157), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 31/83 (37%), Positives = 51/83 (61%)

Query: 25  PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84
           P GAV V + ++++RA N+  EL D +AHAE+ A+R+G +      L    +Y +  PC+
Sbjct: 31  PFGAVLVRDGQVLARAVNQVDELCDPSAHAEMQALRIGAKAQGSTDLSGAVMYASGYPCS 90

Query: 85  MCAAAISLARIRRLYYGASNPKG 107
           MC  A+ LA ++++Y+  SN  G
Sbjct: 91  MCYTAMLLAGVKQVYFAYSNEDG 113


>gi|158523013|ref|YP_001530883.1| CMP/dCMP deaminase zinc-binding [Desulfococcus oleovorans Hxd3]
 gi|158511839|gb|ABW68806.1| CMP/dCMP deaminase zinc-binding [Desulfococcus oleovorans Hxd3]
          Length = 168

 Score = 64.7 bits (156), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 47/148 (31%), Positives = 72/148 (48%), Gaps = 14/148 (9%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIIS---RAGNRNRELKDVTAHAEILAIRMGC 63
           FM+ AL++A+ A    E PVG V      +++   R G R     + T HAEI+A+R   
Sbjct: 6   FMTIALKQARQALDAGEFPVGCVIADGKTVVATGARQGTRQNRFNE-TDHAEIVALR--- 61

Query: 64  RILSQEILPE---VDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
            + + +  P+   + LY TLEPC MC  AI +  I ++ YG  +  GGG   G     L 
Sbjct: 62  NLATLDPAPDRAGLVLYSTLEPCLMCFGAILIHGISKIVYGCEDMMGGG--TGCDLSALP 119

Query: 121 TCHHSP--EIYPGISEQRSRQIIQDFFK 146
             +     EI  G+   +S  + + FF+
Sbjct: 120 PLYREKRVEILAGVMRAQSLALFKAFFQ 147


>gi|264680472|ref|YP_003280382.1| CMP/dCMP deaminase, zinc-binding protein [Comamonas testosteroni
           CNB-2]
 gi|262210988|gb|ACY35086.1| CMP/dCMP deaminase, zinc-binding protein [Comamonas testosteroni
           CNB-2]
          Length = 166

 Score = 64.7 bits (156), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 38/96 (39%), Positives = 54/96 (56%), Gaps = 1/96 (1%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           ++  A+  A  A  R   P GA+ V  + ++++RA N N E  D TAHAE+ AIR+   +
Sbjct: 16  YLREAIALADTARERGNRPFGALIVAADGRVLARASNANGESGDCTAHAELSAIRLASPL 75

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
            S+  L    LY + EPC MCA AI  + I R+ YG
Sbjct: 76  HSRGELAVATLYSSAEPCVMCAGAIFWSAIGRVVYG 111


>gi|209886320|ref|YP_002290177.1| cytidine/deoxycytidylate deaminase family protein [Oligotropha
           carboxidovorans OM5]
 gi|209874516|gb|ACI94312.1| cytidine/deoxycytidylate deaminase family protein [Oligotropha
           carboxidovorans OM5]
          Length = 154

 Score = 64.7 bits (156), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 40/107 (37%), Positives = 52/107 (48%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M     F+  A+E A+N       P GAV V + K+I+   N      D T HAE+ AIR
Sbjct: 1   MSDTERFLCEAIELARNNVRNGGRPFGAVLVKDGKVIATGVNEIGATGDPTTHAELQAIR 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKG 107
              R+L    L    +Y +  PC MC AA+ L  IR L Y  SN +G
Sbjct: 61  AASRVLGTPRLDGCIVYASGHPCPMCLAAMHLTGIRELAYAYSNDEG 107


>gi|195623500|gb|ACG33580.1| cytidine/deoxycytidylate deaminase family protein [Zea mays]
          Length = 186

 Score = 64.7 bits (156), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 39/97 (40%), Positives = 60/97 (61%), Gaps = 1/97 (1%)

Query: 7   FMSCALEEA-QNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           F++ A+EEA +     +  P GAV V N++++    N   +  D TAHAE+ AIR  C+ 
Sbjct: 34  FLTKAVEEAYRGVDCGDGGPFGAVVVCNDEVVVSCHNMVLKHTDPTAHAEVTAIREACKK 93

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGA 102
           L +  L + ++Y + EPC MC +A+ L+RI+RL YGA
Sbjct: 94  LGKIELSDCEIYASCEPCPMCFSAVHLSRIKRLVYGA 130


>gi|218199364|gb|EEC81791.1| hypothetical protein OsI_25504 [Oryza sativa Indica Group]
 gi|222636744|gb|EEE66876.1| hypothetical protein OsJ_23692 [Oryza sativa Japonica Group]
          Length = 186

 Score = 64.7 bits (156), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 39/97 (40%), Positives = 59/97 (60%), Gaps = 1/97 (1%)

Query: 7   FMSCALEEA-QNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           F++ A+EEA +     +  P GAV V N++++    N   +  D TAHAE+ AIR  C+ 
Sbjct: 34  FLTKAVEEAYRGVDCGDGGPFGAVVVRNDEVVVSCHNMVLKHTDPTAHAEVTAIREACKK 93

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGA 102
           L +  L + ++Y + EPC MC  A+ L+RI+RL YGA
Sbjct: 94  LGKIELSDCEIYASCEPCPMCFGAVHLSRIKRLVYGA 130


>gi|115471365|ref|NP_001059281.1| Os07g0245100 [Oryza sativa Japonica Group]
 gi|113610817|dbj|BAF21195.1| Os07g0245100 [Oryza sativa Japonica Group]
          Length = 186

 Score = 64.7 bits (156), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 39/97 (40%), Positives = 59/97 (60%), Gaps = 1/97 (1%)

Query: 7   FMSCALEEA-QNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           F++ A+EEA +     +  P GAV V N++++    N   +  D TAHAE+ AIR  C+ 
Sbjct: 34  FLTKAVEEAYRGVDCGDGGPFGAVVVRNDEVVVSCHNMVLKHTDPTAHAEVTAIREACKK 93

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGA 102
           L +  L + ++Y + EPC MC  A+ L+RI+RL YGA
Sbjct: 94  LGKIELSDCEIYASCEPCPMCFGAVHLSRIKRLVYGA 130


>gi|242043474|ref|XP_002459608.1| hypothetical protein SORBIDRAFT_02g007460 [Sorghum bicolor]
 gi|241922985|gb|EER96129.1| hypothetical protein SORBIDRAFT_02g007460 [Sorghum bicolor]
          Length = 186

 Score = 64.7 bits (156), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 39/97 (40%), Positives = 58/97 (59%), Gaps = 1/97 (1%)

Query: 7   FMSCALEEAQNAALRNEI-PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           F++ A+EEA       +  P GAV V N++++    N   +  D TAHAE+ AIR  C+ 
Sbjct: 34  FLTKAVEEAYRGVDNGDGGPFGAVVVRNDEVVVSCHNMVLKHTDPTAHAEVTAIREACKK 93

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGA 102
           L +  L + ++Y + EPC MC  A+ L+RI+RL YGA
Sbjct: 94  LGKIELSDCEIYASCEPCPMCFGAVHLSRIKRLVYGA 130


>gi|328872297|gb|EGG20664.1| adenosine deaminase [Dictyostelium fasciculatum]
          Length = 307

 Score = 64.7 bits (156), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 55/195 (28%), Positives = 83/195 (42%), Gaps = 52/195 (26%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAI 59
           ++K + +M  A+E+   A    E+PVG V V  N  +I+R  N+    K+ T HAEI A+
Sbjct: 68  IEKHSKYMRLAIEQGYIALNEGEVPVGCVIVHRNGTVIARGFNKTNIKKNATRHAEIEAL 127

Query: 60  RM---------------------------------------------GCRILSQEILPEV 74
                                                          G  I S+++L E 
Sbjct: 128 DSIYLDNVNNYNNNNNNNNNNNNNNNNNNNNNNNNNNNGHHQHVDLNGIDIHSEDLLSEC 187

Query: 75  DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF-YTLATC---HHSPEIYP 130
            LYVT+EPC MCAA + L++I  +Y+G  N K GG  NG+      ATC    H      
Sbjct: 188 TLYVTVEPCIMCAAILQLSKIGMVYFGCYNDKFGG--NGSILPIHNATCVENGHPYNCVS 245

Query: 131 GISEQRSRQIIQDFF 145
           G+ +  +  ++Q F+
Sbjct: 246 GLLKDEAVYLLQKFY 260


>gi|50513754|pdb|1TIY|A Chain A, X-Ray Structure Of Guanine Deaminase From Bacillus
           Subtilis Northeast Structural Genomics Consortium Target
           Sr160
 gi|50513755|pdb|1TIY|B Chain B, X-Ray Structure Of Guanine Deaminase From Bacillus
           Subtilis Northeast Structural Genomics Consortium Target
           Sr160
          Length = 164

 Score = 64.7 bits (156), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 32/80 (40%), Positives = 43/80 (53%)

Query: 25  PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84
           P GAV V +  II+   N      D TAHAE+ AIR  C++L    L +  LY + EPC 
Sbjct: 25  PFGAVIVKDGAIIAEGQNNVTTSNDPTAHAEVTAIRKACKVLGAYQLDDCILYTSCEPCP 84

Query: 85  MCAAAISLARIRRLYYGASN 104
            C  AI  AR + ++Y A +
Sbjct: 85  XCLGAIYWARPKAVFYAAEH 104


>gi|71907361|ref|YP_284948.1| cytidine/deoxycytidylate deaminase, zinc-binding region
           [Dechloromonas aromatica RCB]
 gi|71846982|gb|AAZ46478.1| Cytidine/deoxycytidylate deaminase, zinc-binding region
           [Dechloromonas aromatica RCB]
          Length = 157

 Score = 64.7 bits (156), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 41/111 (36%), Positives = 55/111 (49%), Gaps = 1/111 (0%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEI-PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
           M   + F++ A+E A+  +   E  P GAV V + +II+   NR     D TAHAEI AI
Sbjct: 1   MNPDDQFLARAIELARQGSESGEGGPFGAVIVRDGRIIAEGWNRVVASHDPTAHAEIGAI 60

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI 110
           R  C       L    LY + EPC MC +A   ARI R+ +  S  +   I
Sbjct: 61  RTACAGQDHFHLHGCTLYASSEPCPMCLSAAYWARIERIVFANSRAEAAAI 111


>gi|85118833|ref|XP_965519.1| hypothetical protein NCU01888 [Neurospora crassa OR74A]
 gi|28927329|gb|EAA36283.1| predicted protein [Neurospora crassa OR74A]
          Length = 674

 Score = 64.7 bits (156), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 45/151 (29%), Positives = 66/151 (43%), Gaps = 51/151 (33%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  AL+ A+ A   NE PVG V V  +++I+R  N     ++ T HAE++AI   C +L
Sbjct: 333 FMREALDMARLALKTNETPVGCVLVYKDRVIARGMNATNVSRNGTRHAELMAI---CALL 389

Query: 67  S------------------------------------------------QEILPEVDLYV 78
           S                                                + ++ E  LYV
Sbjct: 390 SYSGDADLEPKNVQPQCNHDEPSVWGDVDPRDGHLFPYGQKLHPAPRVDRSVISECTLYV 449

Query: 79  TLEPCTMCAAAISLARIRRLYYGASNPKGGG 109
           T+EPC MCA+ +   RI+++Y+GA N K GG
Sbjct: 450 TVEPCVMCASLLRQLRIKKVYFGAVNDKFGG 480


>gi|289618605|emb|CBI54849.1| unnamed protein product [Sordaria macrospora]
          Length = 681

 Score = 64.7 bits (156), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 45/151 (29%), Positives = 66/151 (43%), Gaps = 51/151 (33%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  AL+ A+ A   NE PVG V V  +++I+R  N     ++ T HAE++AI   C +L
Sbjct: 339 FMREALDMARLALKTNETPVGCVLVYKDRVIARGMNATNVSRNGTRHAELMAI---CALL 395

Query: 67  S------------------------------------------------QEILPEVDLYV 78
           S                                                + ++ E  LYV
Sbjct: 396 SYSGDADLEPKNAQHQCNHDEPSFWGDVDPRDGHLFPYGQKLHPAPRVDRSVVSECTLYV 455

Query: 79  TLEPCTMCAAAISLARIRRLYYGASNPKGGG 109
           T+EPC MCA+ +   RI+++Y+GA N K GG
Sbjct: 456 TVEPCVMCASLLRQLRIKKVYFGAVNDKFGG 486


>gi|323454898|gb|EGB10767.1| hypothetical protein AURANDRAFT_22290 [Aureococcus anophagefferens]
          Length = 172

 Score = 64.3 bits (155), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 48/142 (33%), Positives = 72/142 (50%), Gaps = 11/142 (7%)

Query: 11  ALEEAQNA-ALRNEIPVGAVAVLNNKI-ISRAGNRNRELKDVTAHAEILAIRMGCRILSQ 68
           ALE A++A A + E+PVG V V +N + I+ A N   E    T HAE++AI    +  + 
Sbjct: 4   ALELAEDAVAEQGEVPVGCVFVNDNNVEIASAANETNEAMCATRHAELVAIDGALKHSAA 63

Query: 69  EILP----EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
              P       LYVT EPC MCA+A+S   I + Y+G  N K GG  +      L+    
Sbjct: 64  RGQPLDWTRCALYVTCEPCIMCASALSQLGIAKCYFGCRNDKFGGCGS-----ILSLHEG 118

Query: 125 SPEIYPGISEQRSRQIIQDFFK 146
           + +I  G+ E  +  + + F+ 
Sbjct: 119 NFDIVEGLREAEAVDLFRRFYD 140


>gi|162461226|ref|NP_001105963.1| cytidine deaminase1 [Zea mays]
 gi|119394643|gb|ABL74483.1| putative cytidine deaminase [Zea mays]
 gi|119394645|gb|ABL74484.1| putative cytidine deaminase [Zea mays]
 gi|195654311|gb|ACG46623.1| cytidine/deoxycytidylate deaminase family protein [Zea mays]
          Length = 186

 Score = 64.3 bits (155), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 39/97 (40%), Positives = 59/97 (60%), Gaps = 1/97 (1%)

Query: 7   FMSCALEEA-QNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           F++ A+EEA +     +  P GAV V N++++    N   +  D TAHAE+ AIR  C+ 
Sbjct: 34  FLTKAVEEAYRGVDCGDGGPFGAVVVRNDEVVVSCHNMVLKHTDPTAHAEVTAIREACKK 93

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGA 102
           L +  L + ++Y + EPC MC  A+ L+RI+RL YGA
Sbjct: 94  LGKIELSDCEIYASCEPCPMCFGAVHLSRIKRLVYGA 130


>gi|23928436|gb|AAN40022.1| putative cytidine deaminase [Zea mays]
          Length = 180

 Score = 64.3 bits (155), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 39/97 (40%), Positives = 59/97 (60%), Gaps = 1/97 (1%)

Query: 7   FMSCALEEA-QNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           F++ A+EEA +     +E P GAV V N++++    N   +  D  AHAE+ AIR  C+ 
Sbjct: 28  FLTKAVEEAYRGVDCGDEGPFGAVVVRNDEVVVSCHNMVLKHTDPIAHAEVTAIREACKK 87

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGA 102
           L +  L + ++Y + EPC MC  A+ L+RI+RL YGA
Sbjct: 88  LGKIELSDCEIYASCEPCPMCFGALHLSRIKRLVYGA 124


>gi|291165661|gb|EFE27710.1| cytidine/deoxycytidylate deaminase family protein [Filifactor
           alocis ATCC 35896]
          Length = 150

 Score = 64.3 bits (155), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 39/106 (36%), Positives = 55/106 (51%), Gaps = 4/106 (3%)

Query: 8   MSCALEEAQNAAL----RNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
           M C +EEA   AL    + E+PVGAV V ++ II R  N     +    HAE++AI+   
Sbjct: 1   MDCYMEEAFREALYSYQKEEVPVGAVIVKDDVIIGRGHNVIETHQSSVCHAEMIAIQQAQ 60

Query: 64  RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109
           + L    L    +YVTLEPC MC  AI  +R+  L+    + + G 
Sbjct: 61  KHLRNWRLNGAKMYVTLEPCLMCMGAILNSRLSELHIATRDFERGA 106


>gi|119394651|gb|ABL74487.1| putative cytidine deaminase [Zea mays]
 gi|119394653|gb|ABL74488.1| putative cytidine deaminase [Zea mays]
          Length = 186

 Score = 64.3 bits (155), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 39/97 (40%), Positives = 59/97 (60%), Gaps = 1/97 (1%)

Query: 7   FMSCALEEA-QNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           F++ A+EEA +     +  P GAV V N++++    N   +  D TAHAE+ AIR  C+ 
Sbjct: 34  FLTKAVEEAYRGVDCGDGGPFGAVVVCNDEVVVSCHNMVLKHTDPTAHAEVTAIREACKK 93

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGA 102
           L +  L + ++Y + EPC MC  A+ L+RI+RL YGA
Sbjct: 94  LGKIELSDCEIYASCEPCPMCFGAVHLSRIKRLVYGA 130


>gi|29654671|ref|NP_820363.1| cytidine/deoxycytidylate deaminase family protein [Coxiella
           burnetii RSA 493]
 gi|153209491|ref|ZP_01947406.1| cytidine/deoxycytidylate deaminase family protein [Coxiella
           burnetii 'MSU Goat Q177']
 gi|154706754|ref|YP_001424808.1| hypothetical protein CBUD_1461 [Coxiella burnetii Dugway 5J108-111]
 gi|161830445|ref|YP_001597217.1| cytidine/deoxycytidylate deaminase family protein [Coxiella
           burnetii RSA 331]
 gi|165923928|ref|ZP_02219760.1| cytidine/deoxycytidylate deaminase family protein [Coxiella
           burnetii RSA 334]
 gi|212212253|ref|YP_002303189.1| cytidine/deoxycytidylate deaminase family protein [Coxiella
           burnetii CbuG_Q212]
 gi|212218777|ref|YP_002305564.1| cytidine/deoxycytidylate deaminase family protein [Coxiella
           burnetii CbuK_Q154]
 gi|29541939|gb|AAO90877.1| cytidine/deoxycytidylate deaminase family protein [Coxiella
           burnetii RSA 493]
 gi|120575344|gb|EAX31968.1| cytidine/deoxycytidylate deaminase family protein [Coxiella
           burnetii 'MSU Goat Q177']
 gi|154356040|gb|ABS77502.1| hypothetical protein CBUD_1461 [Coxiella burnetii Dugway 5J108-111]
 gi|161762312|gb|ABX77954.1| cytidine/deoxycytidylate deaminase family protein [Coxiella
           burnetii RSA 331]
 gi|165916620|gb|EDR35224.1| cytidine/deoxycytidylate deaminase family protein [Coxiella
           burnetii RSA 334]
 gi|212010663|gb|ACJ18044.1| cytidine/deoxycytidylate deaminase family protein [Coxiella
           burnetii CbuG_Q212]
 gi|212013039|gb|ACJ20419.1| cytidine/deoxycytidylate deaminase family protein [Coxiella
           burnetii CbuK_Q154]
          Length = 159

 Score = 64.3 bits (155), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 35/93 (37%), Positives = 49/93 (52%)

Query: 25  PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84
           P GA+ V ++KII++  NR     D TAH+EI+AIR  C+ L+   L    LYV  EPC 
Sbjct: 28  PFGALIVRDSKIIAKGVNRVTTSNDPTAHSEIVAIREACQKLNTFNLTGCYLYVNCEPCP 87

Query: 85  MCAAAISLARIRRLYYGASNPKGGGIENGTQFY 117
           MC  A   ARI ++ +  +      I     +Y
Sbjct: 88  MCLGACYWARIDKIIFSLTKKDAENIGFKDAYY 120


>gi|162461371|ref|NP_001105964.1| cytidine deaminase2 [Zea mays]
 gi|119394647|gb|ABL74485.1| putative cytidine deaminase [Zea mays]
 gi|119394649|gb|ABL74486.1| putative cytidine deaminase [Zea mays]
          Length = 186

 Score = 64.3 bits (155), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 39/97 (40%), Positives = 59/97 (60%), Gaps = 1/97 (1%)

Query: 7   FMSCALEEA-QNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           F++ A+EEA +     +  P GAV V N++++    N   +  D TAHAE+ AIR  C+ 
Sbjct: 34  FLTKAVEEAYRGVDCGDGGPFGAVVVCNDEVVVSCHNMVLKHTDPTAHAEVTAIREACKK 93

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGA 102
           L +  L + ++Y + EPC MC  A+ L+RI+RL YGA
Sbjct: 94  LGKIELSDCEIYASCEPCPMCFGAVHLSRIKRLVYGA 130


>gi|325856346|ref|ZP_08172062.1| guanine deaminase [Prevotella denticola CRIS 18C-A]
 gi|327312522|ref|YP_004327959.1| guanine deaminase [Prevotella denticola F0289]
 gi|325483530|gb|EGC86502.1| guanine deaminase [Prevotella denticola CRIS 18C-A]
 gi|326944415|gb|AEA20300.1| guanine deaminase [Prevotella denticola F0289]
          Length = 155

 Score = 64.3 bits (155), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 36/110 (32%), Positives = 51/110 (46%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
            M  A+E + ++      P GAV   N +II+   N      D TAHAE+  IR  C+ L
Sbjct: 6   LMRRAIELSADSVRNGGGPFGAVIARNGEIIAEGSNGVTIYNDPTAHAEVSTIRKACQKL 65

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116
           +   L   ++Y + EPC MC  AI  A + ++YY        GI     F
Sbjct: 66  NTFDLTGCEIYTSCEPCPMCLGAIYWAHLDKIYYANDRKDAAGIGFDDDF 115


>gi|33865610|ref|NP_897169.1| cytidine/deoxycytidylate deaminase family protein [Synechococcus
           sp. WH 8102]
 gi|33632780|emb|CAE07591.1| cytidine/deoxycytidylate deaminase family protein [Synechococcus
           sp. WH 8102]
          Length = 157

 Score = 64.3 bits (155), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 39/140 (27%), Positives = 64/140 (45%), Gaps = 1/140 (0%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           +M   L  A       E+PV AV +    + I    NR    +D   HAE++A+     I
Sbjct: 10  WMEVLLARASVNGDSGEVPVAAVILDEQGRCIGHGRNRRERCQDPLGHAELVALSQAATI 69

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
                     L VTLEPC MCA A+  AR+  + +GA++ K GG+          + HH 
Sbjct: 70  RGDWRFNPCTLLVTLEPCPMCAGALVQARMGTVIFGATDRKRGGLGGCINLADDPSAHHH 129

Query: 126 PEIYPGISEQRSRQIIQDFF 145
             +   + ++R+ + ++ +F
Sbjct: 130 MRVVGPLMQERAAEQLEIWF 149


>gi|242043476|ref|XP_002459609.1| hypothetical protein SORBIDRAFT_02g007465 [Sorghum bicolor]
 gi|241922986|gb|EER96130.1| hypothetical protein SORBIDRAFT_02g007465 [Sorghum bicolor]
          Length = 175

 Score = 64.3 bits (155), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 35/99 (35%), Positives = 57/99 (57%), Gaps = 1/99 (1%)

Query: 7   FMSCALEEAQNAA-LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           F+  A++EA  A       P GAV V  ++ +  + N  R+  D +AHAE+ AIR  C+ 
Sbjct: 22  FILKAVDEAYRAVECDGGYPFGAVIVHGDEEVVSSHNLVRKDTDPSAHAEVAAIRQACKK 81

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASN 104
           L +  L + ++Y + EPC MC   I L++I+++ YGA +
Sbjct: 82  LGKINLSDCEIYTSCEPCPMCLGLIRLSKIKKVVYGAKS 120


>gi|76160949|gb|ABA40438.1| unknown [Solanum tuberosum]
          Length = 186

 Score = 64.3 bits (155), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 40/97 (41%), Positives = 60/97 (61%), Gaps = 1/97 (1%)

Query: 7   FMSCALEEA-QNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           F++ A+EEA +     +  P GAV V NN+++    N   +  D TAHAE+ A+R  C+ 
Sbjct: 34  FLTQAVEEAYKGVECGDGGPFGAVVVCNNEVVVSCHNMVLKHTDPTAHAEVTAVREACKK 93

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGA 102
           L++  L + ++Y + EPC MC  AI L+RI+RL YGA
Sbjct: 94  LNRIELADCEIYASCEPCPMCFGAIHLSRIKRLVYGA 130


>gi|307565561|ref|ZP_07628041.1| guanine deaminase [Prevotella amnii CRIS 21A-A]
 gi|307345720|gb|EFN91077.1| guanine deaminase [Prevotella amnii CRIS 21A-A]
          Length = 155

 Score = 64.3 bits (155), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 43/145 (29%), Positives = 64/145 (44%), Gaps = 12/145 (8%)

Query: 11  ALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEI 70
           A+E + N+      P GAV   N KII+   N+     D TAHAEI  IR+ C  L    
Sbjct: 10  AIELSINSVRNGGGPFGAVISHNGKIIAEGSNKVTINNDPTAHAEISTIRIACEKLKTFN 69

Query: 71  LPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYP 130
           L   ++Y + EPC MC  AI  A + ++YY         I     F      +   E+ P
Sbjct: 70  LSGCEIYTSCEPCPMCLGAIYWAHLDKIYYANDRKDAAKIGFDDDF-----IYQEIEVEP 124

Query: 131 GISEQRSRQIIQ-------DFFKER 148
              ++ S  ++Q       D ++E+
Sbjct: 125 QYRKKPSEILLQSEAIKAFDLWREK 149


>gi|288561455|ref|YP_003424941.1| CMP/dCMP deaminase [Methanobrevibacter ruminantium M1]
 gi|288544165|gb|ADC48049.1| CMP/dCMP deaminase [Methanobrevibacter ruminantium M1]
          Length = 155

 Score = 64.3 bits (155), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 44/142 (30%), Positives = 69/142 (48%), Gaps = 18/142 (12%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  A++EA+ ++    +P+GAV V  N+IISR  NR  +      HAE+ AI    R L
Sbjct: 5   FMEEAIKEAEISSKEGGLPIGAVLVKENQIISRGHNRLIQKDSSILHAEMDAIENAGR-L 63

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG----IENGTQFYTLATC 122
           + E   +  LY TL PC MC+ A+ L  I R+  G +    G      +NG +   L   
Sbjct: 64  NHEDYQKCTLYTTLSPCPMCSGAVILYNIPRVVIGDNQTLMGAEKLLKDNGVEIIVL--- 120

Query: 123 HHSPEIYPGISEQRSRQIIQDF 144
                     ++ + +++ +DF
Sbjct: 121 ----------NDDKCKELFEDF 132


>gi|299134252|ref|ZP_07027445.1| CMP/dCMP deaminase zinc-binding [Afipia sp. 1NLS2]
 gi|298590999|gb|EFI51201.1| CMP/dCMP deaminase zinc-binding [Afipia sp. 1NLS2]
          Length = 154

 Score = 64.3 bits (155), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 37/107 (34%), Positives = 52/107 (48%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M     F+  A+E A+    +   P GAV V + K+I+   N   E  D T HAE+ AIR
Sbjct: 1   MSDAKGFLCEAIELARENVRKGGRPFGAVLVKDGKVIATGVNEILETGDPTTHAELQAIR 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKG 107
           +   +L    L    +Y +  PC MC +A+ L  IR   Y  SN +G
Sbjct: 61  VASHVLGSPRLDGCTIYASGHPCPMCLSAMHLTGIREFAYAYSNEEG 107


>gi|21673423|ref|NP_661488.1| cytosine deaminase [Chlorobium tepidum TLS]
 gi|21646524|gb|AAM71830.1| cytosine deaminase [Chlorobium tepidum TLS]
          Length = 148

 Score = 64.3 bits (155), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 41/108 (37%), Positives = 56/108 (51%), Gaps = 4/108 (3%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M + + FM+ ALE+A+ +     +PVGAV V N K+++   N+  +  D  AH E+  IR
Sbjct: 1   MNRDHEFMALALEQARKSYDEGGVPVGAVMVENGKVLAAGHNQRVQQGDPIAHGEMDCIR 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS-NPKG 107
              R    +    V LY TL PC MCA AI    I R+  G   N KG
Sbjct: 61  KAGRCARYDT---VTLYTTLSPCMMCAGAIVQFGIGRVVVGEDRNFKG 105


>gi|108763474|ref|YP_633568.1| putative guanine deaminase [Myxococcus xanthus DK 1622]
 gi|108467354|gb|ABF92539.1| putative guanine deaminase [Myxococcus xanthus DK 1622]
          Length = 153

 Score = 64.3 bits (155), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 38/101 (37%), Positives = 54/101 (53%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  A+  A+        P GA+ V + ++I+RA N   + KD TAHAE+LAIR   + L
Sbjct: 8   FMREAIALARTNVKSGGRPFGALLVRDGRVIARAVNEVNQTKDPTAHAELLAIRNASQSL 67

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKG 107
               L    +Y +  PC MC AA+ L  I+  Y+  SN +G
Sbjct: 68  GSASLSGCVVYASGHPCPMCLAAMYLCGIQGAYFAYSNEEG 108


>gi|316971587|gb|EFV55344.1| tRNA-specific adenosine deaminase 2 [Trichinella spiralis]
          Length = 311

 Score = 64.3 bits (155), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 45/144 (31%), Positives = 69/144 (47%), Gaps = 10/144 (6%)

Query: 11  ALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR---MGCR--- 64
           A   A+ A    E+PVG V +  N II R  NR    K+   HAE+ A     + C+   
Sbjct: 11  AFTLARKALSIGEVPVGCVLLYENVIIGRGHNRVNFYKNACRHAEMEAFDEAFLWCKANC 70

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
               ++  +  L+VT EPC MCAA I   +++R+ YG  N + GG   G+      T  H
Sbjct: 71  FSFNDVFLKTTLFVTCEPCMMCAALICKMQLKRVVYGCPNDRFGGF--GSVLDVKETFGH 128

Query: 125 S--PEIYPGISEQRSRQIIQDFFK 146
           +   EI     +  S +++Q F++
Sbjct: 129 TFPSEIVANYRKDESVKLLQIFYE 152


>gi|256851752|ref|ZP_05557140.1| CMP/dCMP deaminase zinc-binding [Lactobacillus jensenii 27-2-CHN]
 gi|260661531|ref|ZP_05862443.1| CMP/dCMP deaminase zinc-binding [Lactobacillus jensenii 115-3-CHN]
 gi|282933582|ref|ZP_06338952.1| tRNA-specific adenosine deaminase [Lactobacillus jensenii 208-1]
 gi|297205374|ref|ZP_06922770.1| CMP/dCMP deaminase zinc-binding [Lactobacillus jensenii JV-V16]
 gi|256615710|gb|EEU20899.1| CMP/dCMP deaminase zinc-binding [Lactobacillus jensenii 27-2-CHN]
 gi|260547588|gb|EEX23566.1| CMP/dCMP deaminase zinc-binding [Lactobacillus jensenii 115-3-CHN]
 gi|281302325|gb|EFA94557.1| tRNA-specific adenosine deaminase [Lactobacillus jensenii 208-1]
 gi|297149952|gb|EFH30249.1| CMP/dCMP deaminase zinc-binding [Lactobacillus jensenii JV-V16]
          Length = 150

 Score = 63.9 bits (154), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 41/144 (28%), Positives = 68/144 (47%), Gaps = 6/144 (4%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  A+E ++ A      P GAV V +N+++    N+     D T HAE   IR  C   
Sbjct: 6   FMQEAIELSKKAVEHGNEPFGAVLVKDNEVVFTNENQIFTANDPTFHAETGLIRRFCTST 65

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPK-----GGGIENGTQFYTLAT 121
               L E  LY + EPC MC+ A+  +++ R+ Y ASN       G    N ++      
Sbjct: 66  GITDLSEYTLYTSCEPCFMCSGAMVWSKLGRMVYAASNDDLEMTMGKHGSNCSKI-VFEN 124

Query: 122 CHHSPEIYPGISEQRSRQIIQDFF 145
            +++P +  G+  + S  +++ +F
Sbjct: 125 YNNAPTVTSGVLREESVAVLKAYF 148


>gi|158522912|ref|YP_001530782.1| CMP/dCMP deaminase zinc-binding [Desulfococcus oleovorans Hxd3]
 gi|158511738|gb|ABW68705.1| CMP/dCMP deaminase zinc-binding [Desulfococcus oleovorans Hxd3]
          Length = 157

 Score = 63.9 bits (154), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 40/105 (38%), Positives = 56/105 (53%), Gaps = 3/105 (2%)

Query: 1   MKKGNVFMSCALEEAQNAALR--NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           M+  + FM  A+E A+ A ++  +  P GAV V + +I+    NR     D TAH EI+A
Sbjct: 1   MEMHDAFMRRAIELAR-AGMKAGDGGPFGAVVVRDGQIVGEGANRVLAHNDPTAHGEIVA 59

Query: 59  IRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
           IR   + L    L    LY T +PC MC  AI  A I+ +Y+G S
Sbjct: 60  IRDAAKRLGTYDLDGCVLYTTGQPCPMCLGAIYWAHIQTVYFGFS 104


>gi|292491509|ref|YP_003526948.1| guanine deaminase [Nitrosococcus halophilus Nc4]
 gi|291580104|gb|ADE14561.1| Guanine deaminase [Nitrosococcus halophilus Nc4]
          Length = 155

 Score = 63.9 bits (154), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 35/86 (40%), Positives = 46/86 (53%)

Query: 25  PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84
           P GA+ V + +I++ A N   E  D TAHAEI AIRM C+ ++   L    LY + EPC 
Sbjct: 24  PFGALIVRDGEILAHACNGVVEACDPTAHAEIQAIRMACKHINHFHLEGCVLYCSCEPCP 83

Query: 85  MCAAAISLARIRRLYYGASNPKGGGI 110
           MC  A   A +  +YY AS      I
Sbjct: 84  MCLGAAYWAHLDGIYYAASREDAANI 109


>gi|126659190|ref|ZP_01730328.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [Cyanothece
           sp. CCY0110]
 gi|126619495|gb|EAZ90226.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [Cyanothece
           sp. CCY0110]
          Length = 143

 Score = 63.9 bits (154), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 48/120 (40%), Positives = 65/120 (54%), Gaps = 9/120 (7%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR-MGCRI 65
           FM  AL EA+    + ++P GA+ V N++II R  N  +   DV+AH EI  +R M  +I
Sbjct: 6   FMREALVEAK----KGDLPYGAILVNNDEIIMRGYNTAQRDNDVSAHGEINVLRAMTQKI 61

Query: 66  -LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
             S + L    LY T EPC MCAAA   A +  + +GAS  +   I  GTQ   L TC +
Sbjct: 62  GYSLDSLKNYTLYTTCEPCPMCAAACVWAGVSHIVFGASTEQ--LISLGTQQINL-TCQN 118


>gi|119962522|ref|YP_949093.1| cytidine/deoxycytidylate deaminase [Arthrobacter aurescens TC1]
 gi|119949381|gb|ABM08292.1| putative cytidine/deoxycytidylate deaminase [Arthrobacter aurescens
           TC1]
          Length = 164

 Score = 63.9 bits (154), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 36/97 (37%), Positives = 49/97 (50%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           F++ ++E A    L +  P GAV V  +       NR     D TAHAE+ AIR  CR L
Sbjct: 10  FLATSIELATANVLNSGGPFGAVIVTADGRAFEGVNRVTATNDPTAHAEVTAIRNACREL 69

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
               L    LY + EPC MC A+   AR+ R+++ A 
Sbjct: 70  GTFDLSGATLYTSCEPCPMCLASALWARVDRVFFAAD 106


>gi|323454906|gb|EGB10775.1| hypothetical protein AURANDRAFT_21935 [Aureococcus anophagefferens]
          Length = 152

 Score = 63.9 bits (154), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 49/144 (34%), Positives = 71/144 (49%), Gaps = 2/144 (1%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRN--RELKDVTAHAEILAIRMGCRI 65
           M  AL+EA+ AA   E+PVGAV V +      A   N     +D +AHAE+LA+R     
Sbjct: 1   MGLALDEARRAAAAGEVPVGAVVVDDATGAVVAAAGNAIEATQDASAHAELLALRRAAAA 60

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
                L    LY TLEPC +C +A    R+ R+ YGA + + G  E+      L    H+
Sbjct: 61  RGNWRLANCTLYSTLEPCVLCMSACYAFRVGRVVYGAPDHRLGAAESWLNMAELGHPFHA 120

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
             +  G+ E  +   ++ FF+ RR
Sbjct: 121 LAVDGGVREPEAADAMRSFFRARR 144


>gi|294930369|ref|XP_002779543.1| cytidine deaminase, putative [Perkinsus marinus ATCC 50983]
 gi|239888855|gb|EER11338.1| cytidine deaminase, putative [Perkinsus marinus ATCC 50983]
          Length = 111

 Score = 63.9 bits (154), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 34/87 (39%), Positives = 51/87 (58%), Gaps = 1/87 (1%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI-RMGCRI 65
           FM  AL  AQ A   +E+PVG   V N  +++ AGN     ++ T HAE++A  ++  + 
Sbjct: 22  FMRVALAAAQEAYDTDEVPVGCAFVSNGVVLATAGNETNHTRNATRHAELVATDKIYDKY 81

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISL 92
            S + +    LYVT+EPC MCAAA+ +
Sbjct: 82  KSCDAIRHSTLYVTVEPCVMCAAALHI 108


>gi|159112692|ref|XP_001706574.1| Cytosine deaminase, putative [Giardia lamblia ATCC 50803]
 gi|157434672|gb|EDO78900.1| Cytosine deaminase, putative [Giardia lamblia ATCC 50803]
          Length = 169

 Score = 63.9 bits (154), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 43/143 (30%), Positives = 76/143 (53%), Gaps = 14/143 (9%)

Query: 12  LEEAQNAALRNEIPVG-AVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEI 70
            +EA  A    E+PVG A+     +I++   N   + ++ T HAEI+A+    ++ S   
Sbjct: 5   FKEASLALAEREVPVGCAIVDSAGRILATGRNATNKTRNSTHHAEIMAL---AQLPSGTD 61

Query: 71  LPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYP 130
           L +  LYVT+EPC MCAAA+S+  +  + Y A N K GG  +      L   +H+   + 
Sbjct: 62  LSDCVLYVTIEPCIMCAAALSIVGLTNIIYFARNSKFGGCGS-----VLDVNNHTARPWT 116

Query: 131 GIS-----EQRSRQIIQDFFKER 148
            ++     ++R+  ++Q+FF+ +
Sbjct: 117 KLNAKYVPDERAIHLLQEFFERK 139


>gi|120435954|ref|YP_861640.1| cytidine/deoxycytidylate deaminase family protein [Gramella
           forsetii KT0803]
 gi|117578104|emb|CAL66573.1| cytidine/deoxycytidylate deaminase family protein [Gramella
           forsetii KT0803]
          Length = 149

 Score = 63.9 bits (154), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 35/100 (35%), Positives = 51/100 (51%), Gaps = 2/100 (2%)

Query: 20  LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVT 79
           + N  P GAV    ++II+ + N+    +D T HAE+ AI+  CR L+   L    L+ +
Sbjct: 24  MDNGGPFGAVITKGDEIIAESCNKVLAKEDCTEHAELRAIQKACRKLNSSSLQGCVLFTS 83

Query: 80  LEPCTMCAAAISLARIRRLYYGAS--NPKGGGIENGTQFY 117
            EPC MC  A   A    +YYGAS  + K  G +    +Y
Sbjct: 84  CEPCMMCLGAAYWADFDNIYYGASALDAKEYGFKYSDMYY 123


>gi|254282421|ref|ZP_04957389.1| guanine deaminase [gamma proteobacterium NOR51-B]
 gi|219678624|gb|EED34973.1| guanine deaminase [gamma proteobacterium NOR51-B]
          Length = 155

 Score = 63.5 bits (153), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 34/76 (44%), Positives = 42/76 (55%)

Query: 25  PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84
           P GAV V NN++I+ + NR     D TAHAE+ AIR     L    L    LY + EPC 
Sbjct: 24  PFGAVIVKNNEMIAESANRVLAHSDPTAHAEVEAIRSAGEALGTFDLSGCTLYASCEPCP 83

Query: 85  MCAAAISLARIRRLYY 100
           MC  AI  ARI  +Y+
Sbjct: 84  MCLGAIYWARISAVYF 99


>gi|261345369|ref|ZP_05973013.1| guanine deaminase [Providencia rustigianii DSM 4541]
 gi|282566412|gb|EFB71947.1| guanine deaminase [Providencia rustigianii DSM 4541]
          Length = 154

 Score = 63.5 bits (153), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 31/80 (38%), Positives = 47/80 (58%)

Query: 25  PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84
           P GAV V +  +++   N+  E  D TAHAE+LA+R    +L +  L +  +Y + +PC 
Sbjct: 24  PFGAVVVYDGSVVATGVNQMLERNDPTAHAELLALRQAGEVLGKVRLDDCVVYASGQPCP 83

Query: 85  MCAAAISLARIRRLYYGASN 104
           MC AA+ +A I R+ Y  SN
Sbjct: 84  MCLAAMRMAGISRIVYAYSN 103


>gi|300114455|ref|YP_003761030.1| CMP/dCMP deaminase zinc-binding protein [Nitrosococcus watsonii
           C-113]
 gi|299540392|gb|ADJ28709.1| CMP/dCMP deaminase zinc-binding protein [Nitrosococcus watsonii
           C-113]
          Length = 187

 Score = 63.5 bits (153), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 36/103 (34%), Positives = 56/103 (54%), Gaps = 1/103 (0%)

Query: 2   KKGNVFMSCALEEAQNAA-LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           ++   +M  A+E ++ A  L +  P G+V     +I+    NR+   +D +AHAEI AIR
Sbjct: 34  ERATQWMRRAIELSRKAMELGDGFPFGSVIAKEGEIVGEGWNRSWVNRDPSAHAEIEAIR 93

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
             C+ L    L   D+Y + +PC MC AAI  A   R+++G S
Sbjct: 94  DACKRLDTLSLEGCDVYASAQPCPMCIAAIYWAGANRIFFGNS 136


>gi|88808480|ref|ZP_01123990.1| putative cytidine/deoxycytidylate deaminase [Synechococcus sp. WH
           7805]
 gi|88787468|gb|EAR18625.1| putative cytidine/deoxycytidylate deaminase [Synechococcus sp. WH
           7805]
          Length = 107

 Score = 63.5 bits (153), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 28/93 (30%), Positives = 50/93 (53%)

Query: 57  LAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116
           +A+R G  +L    +    L VTLEPC MCA A+  AR+ ++ + A + K GG+ +    
Sbjct: 1   MALRQGAWVLGDWRMNHCTLLVTLEPCPMCAGALVQARVGQVIFAAKDRKRGGLGSTINL 60

Query: 117 YTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
               + HH   +  G+ E+ +  ++  +F++RR
Sbjct: 61  ADHESAHHHMHVIGGVMEEEASALLAGWFRQRR 93


>gi|45358432|ref|NP_987989.1| cytidine/deoxycytidylate deaminase [Methanococcus maripaludis S2]
 gi|44921190|emb|CAF30425.1| Cytidine/deoxycytidylate deaminase, zinc-binding region related
           protein [Methanococcus maripaludis S2]
          Length = 141

 Score = 63.5 bits (153), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 40/116 (34%), Positives = 59/116 (50%), Gaps = 5/116 (4%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  A++EA  +     IP+GAV V  NKII R  NR  +      HAE+ A+    R L+
Sbjct: 1   MDEAVKEANLSLKEGGIPIGAVLVYENKIIGRGHNRRVQNNSAILHAEMDALENAGR-LT 59

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG----IENGTQFYTL 119
            ++    +LY TL PC MC+ A+ L +I+++  G +    G     I+NG     L
Sbjct: 60  SDVYKNCELYTTLSPCIMCSGAVLLYKIKKVVIGENKTFLGAEDLLIKNGVAVEVL 115


>gi|189466441|ref|ZP_03015226.1| hypothetical protein BACINT_02816 [Bacteroides intestinalis DSM
           17393]
 gi|189434705|gb|EDV03690.1| hypothetical protein BACINT_02816 [Bacteroides intestinalis DSM
           17393]
          Length = 175

 Score = 63.5 bits (153), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 33/77 (42%), Positives = 42/77 (54%)

Query: 25  PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84
           P GAV   + +II+   NR     D TAHAE+ AIR     L    L   ++Y + EPC 
Sbjct: 44  PFGAVIAKDGEIIATGTNRVTASCDPTAHAEVSAIRAAATKLGTFNLSGCEIYTSCEPCP 103

Query: 85  MCAAAISLARIRRLYYG 101
           MC  AI  AR+ R+YYG
Sbjct: 104 MCLGAIYWARLERMYYG 120


>gi|53804410|ref|YP_113955.1| zinc-binding domain-containing protein [Methylococcus capsulatus
           str. Bath]
 gi|53758171|gb|AAU92462.1| zinc-binding domain protein [Methylococcus capsulatus str. Bath]
          Length = 164

 Score = 63.5 bits (153), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 39/104 (37%), Positives = 55/104 (52%), Gaps = 2/104 (1%)

Query: 2   KKGNVFMSCALEEAQNAAL--RNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
           ++   +M  A++  + A +  R   P GAV V   ++++ AGN      D TAHAEI AI
Sbjct: 9   EQDRAYMRLAIQTMRRAGIVDRTGGPFGAVIVRGGQVLAVAGNSVIRDNDPTAHAEINAI 68

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
           R  CR +    L    LY + E C MC A+   ARI ++YY AS
Sbjct: 69  REACRRIGSYDLSGAVLYSSCECCPMCYASAYWARIDQIYYAAS 112


>gi|213969586|ref|ZP_03397722.1| cytosine deaminase [Pseudomonas syringae pv. tomato T1]
 gi|301383360|ref|ZP_07231778.1| cytosine deaminase [Pseudomonas syringae pv. tomato Max13]
 gi|302058808|ref|ZP_07250349.1| cytosine deaminase [Pseudomonas syringae pv. tomato K40]
 gi|302134497|ref|ZP_07260487.1| cytosine deaminase [Pseudomonas syringae pv. tomato NCPPB 1108]
 gi|213925682|gb|EEB59241.1| cytosine deaminase [Pseudomonas syringae pv. tomato T1]
          Length = 145

 Score = 63.2 bits (152), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 37/100 (37%), Positives = 51/100 (51%), Gaps = 1/100 (1%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           + FM  A++EAQ       IP+G+V V   KII R  NR  +    T H E+ A+    R
Sbjct: 2   DAFMQAAIDEAQLGLDEGGIPIGSVIVHAGKIIGRGHNRRVQEGSATRHGEMDALENAGR 61

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASN 104
                +  E  LY TL PC MC+ AI L  IR++  G ++
Sbjct: 62  -QPASVYREAVLYTTLSPCAMCSGAILLYGIRKVIVGENH 100


>gi|291521867|emb|CBK80160.1| Cytosine/adenosine deaminases [Coprococcus catus GD/7]
          Length = 175

 Score = 63.2 bits (152), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 46/145 (31%), Positives = 64/145 (44%), Gaps = 6/145 (4%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  A+  +Q A      P GAV V N +I+    N+     D T H E   IR  C   
Sbjct: 27  FMREAIRLSQLAVEHGNEPFGAVLVKNGEIVFTNENQIYTRHDPTFHGEAGLIREFCAKT 86

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPK-----GGGIENGTQFYTLAT 121
           S   L +  LY + EPC MC+ A+   ++ RL YGASN       G    N ++      
Sbjct: 87  SITDLHDYTLYSSCEPCFMCSGAMVWVKLGRLVYGASNSDLEAILGNEGCNCSKI-VFDN 145

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFK 146
               P++  GI    S  I++D+F 
Sbjct: 146 SFWQPQVTAGILRAESLMILKDYFD 170


>gi|168185037|ref|ZP_02619701.1| guanine deaminase [Clostridium botulinum Bf]
 gi|237794579|ref|YP_002862131.1| guanine deaminase [Clostridium botulinum Ba4 str. 657]
 gi|182671910|gb|EDT83871.1| guanine deaminase [Clostridium botulinum Bf]
 gi|229262002|gb|ACQ53035.1| guanine deaminase [Clostridium botulinum Ba4 str. 657]
          Length = 157

 Score = 63.2 bits (152), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 32/79 (40%), Positives = 44/79 (55%)

Query: 25  PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84
           P G+  V + ++I+ A N      D TAH E+  IR  C+ LS   L   +LY T EPC 
Sbjct: 25  PFGSAIVKDGEVIAVAHNTVVGDNDPTAHGEVNVIRKACKKLSTFDLSGCELYTTSEPCP 84

Query: 85  MCAAAISLARIRRLYYGAS 103
           MC +AI  A I ++YYG +
Sbjct: 85  MCMSAIIWANISKVYYGCT 103


>gi|221064913|ref|ZP_03541018.1| CMP/dCMP deaminase zinc-binding [Comamonas testosteroni KF-1]
 gi|220709936|gb|EED65304.1| CMP/dCMP deaminase zinc-binding [Comamonas testosteroni KF-1]
          Length = 166

 Score = 63.2 bits (152), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 37/96 (38%), Positives = 54/96 (56%), Gaps = 1/96 (1%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           ++  A+  A  A  R   P GA+ V  + +++++A N N E  D TAHAE+ AIR+   +
Sbjct: 16  YLREAIALADTARERGNRPFGALIVAADGRVLAQASNANGESGDCTAHAELSAIRLASPL 75

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
            S+  L    LY + EPC MCA AI  + I R+ YG
Sbjct: 76  HSRNELAVATLYSSAEPCVMCAGAIFWSAIGRVVYG 111


>gi|307354384|ref|YP_003895435.1| CMP/dCMP deaminase zinc-binding protein [Methanoplanus petrolearius
           DSM 11571]
 gi|307157617|gb|ADN36997.1| CMP/dCMP deaminase zinc-binding protein [Methanoplanus petrolearius
           DSM 11571]
          Length = 148

 Score = 63.2 bits (152), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 41/105 (39%), Positives = 53/105 (50%), Gaps = 3/105 (2%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM+ A+ EA+       IP+GAV V + KII    NR  +  D   HAEI  +R   RI 
Sbjct: 8   FMTAAIIEAKTGHDEGGIPIGAVLVRDGKIIGSGHNRRIQENDPIIHAEIDCLRNAGRIG 67

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIE 111
           S +   +  LY TL PC +CA A+    IRR+  G S    G  E
Sbjct: 68  SYK---DTTLYSTLMPCYLCAGAVVQFGIRRVVVGESRNFAGAKE 109


>gi|28868808|ref|NP_791427.1| cytosine deaminase [Pseudomonas syringae pv. tomato str. DC3000]
 gi|28852047|gb|AAO55122.1| cytosine deaminase [Pseudomonas syringae pv. tomato str. DC3000]
          Length = 145

 Score = 63.2 bits (152), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 37/100 (37%), Positives = 51/100 (51%), Gaps = 1/100 (1%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           + FM  A++EAQ       IP+G+V V   KII R  NR  +    T H E+ A+    R
Sbjct: 2   DAFMQAAIDEAQLGLDEGGIPIGSVIVHAGKIIGRGHNRRVQEGSATRHGEMDALENAGR 61

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASN 104
                +  E  LY TL PC MC+ AI L  IR++  G ++
Sbjct: 62  -QPASVYREAVLYTTLSPCAMCSGAILLYGIRKVIVGENH 100


>gi|170757063|ref|YP_001780911.1| guanine deaminase [Clostridium botulinum B1 str. Okra]
 gi|169122275|gb|ACA46111.1| guanine deaminase [Clostridium botulinum B1 str. Okra]
          Length = 157

 Score = 63.2 bits (152), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 32/79 (40%), Positives = 44/79 (55%)

Query: 25  PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84
           P G+  V N ++I+ A N      D TAH E+  IR  C+ L+   L   +LY T EPC 
Sbjct: 25  PFGSAIVKNGEVIAVAHNTVVGDNDPTAHGEVNVIRKACKKLNTFDLSGCELYTTSEPCP 84

Query: 85  MCAAAISLARIRRLYYGAS 103
           MC +AI  A I ++YYG +
Sbjct: 85  MCMSAIIWANISKVYYGCT 103


>gi|94265695|ref|ZP_01289434.1| Guanine deaminase [delta proteobacterium MLMS-1]
 gi|93453781|gb|EAT04153.1| Guanine deaminase [delta proteobacterium MLMS-1]
          Length = 156

 Score = 63.2 bits (152), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 36/91 (39%), Positives = 45/91 (49%)

Query: 25  PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84
           P  A+ VL+++II +  NR     D TAHAEI AIR  CR      L    LYV  EPC 
Sbjct: 25  PFAALVVLDDEIIGQGCNRVTSDNDPTAHAEIEAIRDACRRRGDFRLTGHTLYVNCEPCP 84

Query: 85  MCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
           MC AA   A ++ + Y A       I+   Q
Sbjct: 85  MCLAAAYWADLKEICYAAERRDAAAIDFADQ 115


>gi|71733993|ref|YP_273732.1| cytosine deaminase [Pseudomonas syringae pv. phaseolicola 1448A]
 gi|257486822|ref|ZP_05640863.1| cytosine deaminase [Pseudomonas syringae pv. tabaci ATCC 11528]
 gi|289625968|ref|ZP_06458922.1| cytosine deaminase [Pseudomonas syringae pv. aesculi str.
           NCPPB3681]
 gi|289647969|ref|ZP_06479312.1| cytosine deaminase [Pseudomonas syringae pv. aesculi str. 2250]
 gi|298488192|ref|ZP_07006229.1| Cytosine deaminase [Pseudomonas savastanoi pv. savastanoi NCPPB
           3335]
 gi|71554546|gb|AAZ33757.1| cytosine deaminase [Pseudomonas syringae pv. phaseolicola 1448A]
 gi|298157471|gb|EFH98554.1| Cytosine deaminase [Pseudomonas savastanoi pv. savastanoi NCPPB
           3335]
 gi|320325406|gb|EFW81471.1| cytosine deaminase [Pseudomonas syringae pv. glycinea str. B076]
 gi|320327453|gb|EFW83466.1| cytosine deaminase [Pseudomonas syringae pv. glycinea str. race 4]
 gi|330869365|gb|EGH04074.1| cytosine deaminase [Pseudomonas syringae pv. aesculi str. 0893_23]
 gi|330877290|gb|EGH11439.1| cytosine deaminase [Pseudomonas syringae pv. glycinea str. race 4]
 gi|330988661|gb|EGH86764.1| cytosine deaminase [Pseudomonas syringae pv. lachrymans str.
           M301315]
 gi|331010292|gb|EGH90348.1| cytosine deaminase [Pseudomonas syringae pv. tabaci ATCC 11528]
          Length = 145

 Score = 63.2 bits (152), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 36/97 (37%), Positives = 51/97 (52%), Gaps = 1/97 (1%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           + FM  A++EAQ       IP+G+V V   KII R  NR  +    T H E+ A+    R
Sbjct: 2   DAFMQAAIDEAQLGLKEGGIPIGSVIVHEGKIIGRGHNRRVQEGSATRHGEMDALENAGR 61

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
             ++ +  +  LY TL PC MC+ AI L  IR++  G
Sbjct: 62  QPAR-VYRDAVLYTTLSPCAMCSGAILLYGIRKVIVG 97


>gi|331017345|gb|EGH97401.1| cytosine deaminase [Pseudomonas syringae pv. lachrymans str.
           M302278PT]
          Length = 145

 Score = 63.2 bits (152), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 37/97 (38%), Positives = 49/97 (50%), Gaps = 1/97 (1%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           + FM  A++EAQ       IP+G+V V   KII R  NR  +    T H E+ A+    R
Sbjct: 2   DAFMQAAIDEAQLGLDEGGIPIGSVIVHAGKIIGRGHNRRVQEGSATRHGEMDALENAGR 61

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
                +  E  LY TL PC MC+ AI L  IR++  G
Sbjct: 62  -QPASVYREAVLYTTLSPCAMCSGAILLYGIRKVIVG 97


>gi|94263276|ref|ZP_01287092.1| Guanine deaminase [delta proteobacterium MLMS-1]
 gi|94266409|ref|ZP_01290105.1| Guanine deaminase [delta proteobacterium MLMS-1]
 gi|93452981|gb|EAT03477.1| Guanine deaminase [delta proteobacterium MLMS-1]
 gi|93456359|gb|EAT06483.1| Guanine deaminase [delta proteobacterium MLMS-1]
          Length = 156

 Score = 63.2 bits (152), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 36/91 (39%), Positives = 45/91 (49%)

Query: 25  PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84
           P  A+ VL+++II +  NR     D TAHAEI AIR  CR      L    LYV  EPC 
Sbjct: 25  PFAALVVLDDEIIGQGCNRVTSDNDPTAHAEIEAIRDACRRRGDFRLTGHTLYVNCEPCP 84

Query: 85  MCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
           MC AA   A ++ + Y A       I+   Q
Sbjct: 85  MCLAAAYWADLKEICYAAERRDAAAIDFADQ 115


>gi|330967403|gb|EGH67663.1| cytosine deaminase [Pseudomonas syringae pv. actinidiae str.
           M302091]
          Length = 145

 Score = 63.2 bits (152), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 37/97 (38%), Positives = 49/97 (50%), Gaps = 1/97 (1%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           + FM  A++EAQ       IP+G+V V   KII R  NR  +    T H E+ A+    R
Sbjct: 2   DAFMQAAIDEAQLGLDEGGIPIGSVIVHAGKIIGRGHNRRVQEGSATRHGEMDALENAGR 61

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
                +  E  LY TL PC MC+ AI L  IR++  G
Sbjct: 62  -QPASVYREAVLYTTLSPCAMCSGAILLYGIRKVIVG 97


>gi|322436459|ref|YP_004218671.1| CMP/dCMP deaminase zinc-binding protein [Acidobacterium sp.
           MP5ACTX9]
 gi|321164186|gb|ADW69891.1| CMP/dCMP deaminase zinc-binding protein [Acidobacterium sp.
           MP5ACTX9]
          Length = 160

 Score = 63.2 bits (152), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 40/98 (40%), Positives = 51/98 (52%), Gaps = 1/98 (1%)

Query: 7   FMSCALEEA-QNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           FM  A++ A QN       P GAV V   ++I+   N      D TAHAE+ AIR  C  
Sbjct: 10  FMQQAIDLATQNVLSGRGGPFGAVIVRAGEVIATGINLVTATNDPTAHAEVTAIRNACAH 69

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
           LS   L    LY + EPC MC  AI  +RI  LY+G++
Sbjct: 70  LSTFELRGATLYSSCEPCPMCLTAILWSRIDTLYFGST 107


>gi|119486171|ref|ZP_01620231.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [Lyngbya
           sp. PCC 8106]
 gi|119456662|gb|EAW37791.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [Lyngbya
           sp. PCC 8106]
          Length = 144

 Score = 63.2 bits (152), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 38/103 (36%), Positives = 56/103 (54%), Gaps = 7/103 (6%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR---MGC 63
           +M  ALEEA+    + ++P GAV V  ++I+ +  N  +   DVTAHAEI  +R   +  
Sbjct: 6   YMKIALEEAK----KGDMPYGAVLVKEDQIVVQGHNTAQRDNDVTAHAEINVLRQFTLEN 61

Query: 64  RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPK 106
           +  S + L    LY T EPC MCAAA     +  + +GAS  +
Sbjct: 62  KSYSIDALKGYTLYTTCEPCPMCAAACVWVGLSEIVFGASTQQ 104


>gi|256374328|ref|YP_003097988.1| CMP/dCMP deaminase zinc-binding [Actinosynnema mirum DSM 43827]
 gi|255918631|gb|ACU34142.1| CMP/dCMP deaminase zinc-binding [Actinosynnema mirum DSM 43827]
          Length = 160

 Score = 63.2 bits (152), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 46/128 (35%), Positives = 66/128 (51%), Gaps = 2/128 (1%)

Query: 23  EIPVGA-VAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEI-LPEVDLYVTL 80
           +IP+GA V   +   ++RA N    L D TAHAE+LA+R    +      L    L VT+
Sbjct: 23  DIPIGAAVFGPDGAELARACNARERLGDPTAHAEVLALRAAAAVFGDGWRLGGCTLAVTV 82

Query: 81  EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140
           EPC MCA A+ LAR+ R+ +GA  PK G   +          +H  E+  G+ E     +
Sbjct: 83  EPCAMCAGALVLARVDRVVFGAWEPKTGAAGSLWDVVRDRRLNHRAEVVGGVREAECAAL 142

Query: 141 IQDFFKER 148
           ++DFF  R
Sbjct: 143 MRDFFAGR 150


>gi|108801923|ref|YP_642120.1| tRNA-adenosine deaminase [Mycobacterium sp. MCS]
 gi|119871075|ref|YP_941027.1| tRNA-adenosine deaminase [Mycobacterium sp. KMS]
 gi|126437904|ref|YP_001073595.1| tRNA-adenosine deaminase [Mycobacterium sp. JLS]
 gi|108772342|gb|ABG11064.1| tRNA-adenosine deaminase [Mycobacterium sp. MCS]
 gi|119697164|gb|ABL94237.1| tRNA-adenosine deaminase [Mycobacterium sp. KMS]
 gi|126237704|gb|ABO01105.1| tRNA-adenosine deaminase [Mycobacterium sp. JLS]
          Length = 150

 Score = 63.2 bits (152), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 45/129 (34%), Positives = 68/129 (52%), Gaps = 2/129 (1%)

Query: 23  EIPVGAVAVLNNKI-ISRAGNRNRELKDVTAHAEILAIRMGCRILSQEI-LPEVDLYVTL 80
           ++P+GAV    +   ++RA N    L D TAHAE+LA+R    +L     L    L VT+
Sbjct: 22  DVPIGAVVFGPDGTELARAANAREALGDPTAHAEVLALRAAAAVLGDGWRLEGTTLAVTV 81

Query: 81  EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140
           EPCTMCA A+ LAR+ R+ +GA  PK G + +          +H P +  G+      + 
Sbjct: 82  EPCTMCAGALVLARVARVVFGAWEPKTGAVGSLWDVVRDRRLNHRPGVRGGVLADECAKP 141

Query: 141 IQDFFKERR 149
           ++ FF  +R
Sbjct: 142 LEAFFARQR 150


>gi|183601156|ref|ZP_02962649.1| hypothetical protein PROSTU_04786 [Providencia stuartii ATCC 25827]
 gi|188019501|gb|EDU57541.1| hypothetical protein PROSTU_04786 [Providencia stuartii ATCC 25827]
          Length = 154

 Score = 63.2 bits (152), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 31/80 (38%), Positives = 47/80 (58%)

Query: 25  PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84
           P GAV V +  +++   N+  EL D TAHAE++A+R     L +  L +  +Y + +PC 
Sbjct: 24  PFGAVIVRDGAVVATGVNQMLELNDPTAHAELMALRQAGETLKRTRLEDCVVYASGQPCP 83

Query: 85  MCAAAISLARIRRLYYGASN 104
           MC AA+ +A I R+ Y  SN
Sbjct: 84  MCLAAMRMAGISRIVYAYSN 103


>gi|77164674|ref|YP_343199.1| cytidine/deoxycytidylate deaminase, zinc-binding region
           [Nitrosococcus oceani ATCC 19707]
 gi|254434877|ref|ZP_05048385.1| Cytidine and deoxycytidylate deaminase zinc-binding region domain
           protein [Nitrosococcus oceani AFC27]
 gi|76882988|gb|ABA57669.1| Cytidine/deoxycytidylate deaminase, zinc-binding region
           [Nitrosococcus oceani ATCC 19707]
 gi|207091210|gb|EDZ68481.1| Cytidine and deoxycytidylate deaminase zinc-binding region domain
           protein [Nitrosococcus oceani AFC27]
          Length = 190

 Score = 63.2 bits (152), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 35/104 (33%), Positives = 57/104 (54%), Gaps = 1/104 (0%)

Query: 2   KKGNVFMSCALEEAQNA-ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           ++   +M  A+E ++ A  L +  P G+V     +I+    NR+   +D +AHAEI AIR
Sbjct: 34  ERATQWMRRAIELSRKAMELGDGFPFGSVIAKEGEIVGEGWNRSWVNRDPSAHAEIEAIR 93

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASN 104
             C+ L    L   D+Y + +PC MC AAI  A   R+++G ++
Sbjct: 94  DACKRLDTLSLEGCDVYASAQPCPMCIAAIYWAGADRIFFGNND 137


>gi|330971095|gb|EGH71161.1| cytosine deaminase [Pseudomonas syringae pv. aceris str. M302273PT]
          Length = 145

 Score = 63.2 bits (152), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 36/97 (37%), Positives = 48/97 (49%), Gaps = 1/97 (1%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           + FM  A +EAQ       IP+G+V V   KII R  NR  +    T H E+ A+    R
Sbjct: 2   DAFMQAAFDEAQLGLKEGGIPIGSVIVHGGKIIGRGHNRRVQEGSATKHGEMDALENAGR 61

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
                +  +  LY TL PC MC+ AI L  IR++  G
Sbjct: 62  -QPASVYRDSVLYTTLSPCAMCSGAILLYGIRKVIIG 97


>gi|261407450|ref|YP_003243691.1| CMP/dCMP deaminase zinc-binding protein [Paenibacillus sp.
           Y412MC10]
 gi|261283913|gb|ACX65884.1| CMP/dCMP deaminase zinc-binding protein [Paenibacillus sp.
           Y412MC10]
          Length = 159

 Score = 63.2 bits (152), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 33/92 (35%), Positives = 44/92 (47%)

Query: 25  PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84
           P GA+ V + ++I R  N    L D TAHAE+ AIR  C  L    L    +Y + EPC 
Sbjct: 28  PFGAIVVKDGQVIGRGRNLVTALNDPTAHAEVQAIREACLHLEDFQLKGCTIYTSCEPCP 87

Query: 85  MCAAAISLARIRRLYYGASNPKGGGIENGTQF 116
           MC  AI  +R   +YY ++      I     F
Sbjct: 88  MCLGAIYWSRPDAVYYASTKQDAAEIGFDDHF 119


>gi|288929191|ref|ZP_06423036.1| guanine deaminase [Prevotella sp. oral taxon 317 str. F0108]
 gi|288329293|gb|EFC67879.1| guanine deaminase [Prevotella sp. oral taxon 317 str. F0108]
          Length = 155

 Score = 63.2 bits (152), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 35/92 (38%), Positives = 44/92 (47%)

Query: 25  PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84
           P GAV     +II+ A NR     D TAHAE+ AIR+    L    L   D+Y + EPC 
Sbjct: 24  PFGAVIARKGEIIAEAANRVTLDHDPTAHAEVSAIRLASSKLGTFNLSGCDIYTSCEPCP 83

Query: 85  MCAAAISLARIRRLYYGASNPKGGGIENGTQF 116
           MC  AI  AR+  +YY  +      I     F
Sbjct: 84  MCLGAIYWARLDNVYYANNREDAANIGFDDDF 115


>gi|224540782|ref|ZP_03681321.1| hypothetical protein BACCELL_05696 [Bacteroides cellulosilyticus
           DSM 14838]
 gi|224517611|gb|EEF86716.1| hypothetical protein BACCELL_05696 [Bacteroides cellulosilyticus
           DSM 14838]
          Length = 155

 Score = 63.2 bits (152), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 32/77 (41%), Positives = 42/77 (54%)

Query: 25  PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84
           P GAV   + +II+   NR     D TAHAE+ AIR     L    L   ++Y + EPC 
Sbjct: 24  PFGAVIAKDGEIIATGTNRVTSSCDPTAHAEVSAIRAAATSLGTFNLSGCEIYTSCEPCP 83

Query: 85  MCAAAISLARIRRLYYG 101
           MC  AI  AR+ ++YYG
Sbjct: 84  MCLGAIYWARLDKMYYG 100


>gi|320451012|ref|YP_004203108.1| tRNA(Ile)-lysidine synthase [Thermus scotoductus SA-01]
 gi|320151181|gb|ADW22559.1| tRNA(Ile)-lysidine synthase [Thermus scotoductus SA-01]
          Length = 514

 Score = 62.8 bits (151), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 43/104 (41%), Positives = 58/104 (55%), Gaps = 7/104 (6%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M+ ALEEA+ A    E+PVGAV V+  ++  RA N+    +D TAHAE+L +R   R  
Sbjct: 382 YMALALEEARQAFQEGEVPVGAVLVVGERVY-RAHNQVEATRDPTAHAEMLLLREVGRGA 440

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI 110
                    LYVTLEPC MC  A+  A +  + YG  N K G +
Sbjct: 441 RGG-----RLYVTLEPCRMCHHALREAGV-EVVYGVENLKEGAL 478


>gi|66047004|ref|YP_236845.1| cytosine deaminase [Pseudomonas syringae pv. syringae B728a]
 gi|289676943|ref|ZP_06497833.1| cytosine deaminase [Pseudomonas syringae pv. syringae FF5]
 gi|302187712|ref|ZP_07264385.1| cytosine deaminase [Pseudomonas syringae pv. syringae 642]
 gi|63257711|gb|AAY38807.1| Cytosine deaminase [Pseudomonas syringae pv. syringae B728a]
 gi|330977861|gb|EGH77764.1| cytosine deaminase [Pseudomonas syringae pv. aptata str. DSM 50252]
          Length = 145

 Score = 62.8 bits (151), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 36/97 (37%), Positives = 48/97 (49%), Gaps = 1/97 (1%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           + FM  A +EAQ       IP+G+V V   KII R  NR  +    T H E+ A+    R
Sbjct: 2   DAFMQAAFDEAQLGLKEGGIPIGSVIVHGGKIIGRGHNRRVQEGSATKHGEMDALENAGR 61

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
                +  +  LY TL PC MC+ AI L  IR++  G
Sbjct: 62  -QPASVYRDSVLYTTLSPCAMCSGAILLYGIRKVIIG 97


>gi|157135264|ref|XP_001656575.1| tRNA-specific adenosine-34 deaminase subunit Tad2p/ADAT2, putative
           [Aedes aegypti]
 gi|108870242|gb|EAT34467.1| tRNA-specific adenosine-34 deaminase subunit Tad2p/ADAT2, putative
           [Aedes aegypti]
          Length = 171

 Score = 62.8 bits (151), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 46/146 (31%), Positives = 68/146 (46%), Gaps = 9/146 (6%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  ALE+A+ A    E+PVG V V   +II+   N   E K+ T H E + I       
Sbjct: 14  FMEQALEQARKAEQLKEVPVGCVFVYRGEIIANGCNLVNETKNATRHVEFICIDQVLEYC 73

Query: 67  SQEILPEVDLY------VTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
               L   D++      VT+EPC MCAAA+    +R + YG  N + GG    T      
Sbjct: 74  KNRSLKHEDVFREVTVVVTVEPCIMCAAALIELNVREVIYGCKNDRFGGC---TVLDVPG 130

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFK 146
               S  I  G+    + +++++F+K
Sbjct: 131 LLKTSIPIRGGVRADEAMELLKEFYK 156


>gi|288905614|ref|YP_003430836.1| guanine deaminase [Streptococcus gallolyticus UCN34]
 gi|288732340|emb|CBI13910.1| putative guanine deaminase [Streptococcus gallolyticus UCN34]
          Length = 154

 Score = 62.8 bits (151), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 35/98 (35%), Positives = 50/98 (51%), Gaps = 1/98 (1%)

Query: 7   FMSCALEEAQNAALRNEI-PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           +M  A++EA +   + +  P G+V V N +I++   N      D TAH E+ AIR     
Sbjct: 5   YMQKAIQEAYDGIKKGDGGPFGSVIVKNGEIVASGHNMVLAHHDPTAHGEVTAIRKAGEK 64

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
           L    L    L+ T EPC MC AA   A I ++YYG +
Sbjct: 65  LGTHDLSGTTLFTTGEPCPMCLAACLWANIDKVYYGCT 102


>gi|189425440|ref|YP_001952617.1| CMP/dCMP deaminase zinc-binding [Geobacter lovleyi SZ]
 gi|189421699|gb|ACD96097.1| CMP/dCMP deaminase zinc-binding [Geobacter lovleyi SZ]
          Length = 145

 Score = 62.8 bits (151), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 37/97 (38%), Positives = 49/97 (50%), Gaps = 1/97 (1%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           + FM  A+EEA+       IP+G+V V NN+II R  NR  +      H E+ A+    R
Sbjct: 2   DSFMQAAIEEAEAGLAEGGIPIGSVIVHNNRIIGRGHNRRVQQGSAILHGEMDALERAGR 61

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
                +  E  LY TL PC MC+ AI L  I R+  G
Sbjct: 62  -QPASVYREAVLYTTLSPCPMCSGAILLYGIPRVVIG 97


>gi|24217029|ref|NP_714510.1| cytidine deaminase [Leptospira interrogans serovar Lai str. 56601]
 gi|24198438|gb|AAN51528.1| cytidine deaminase [Leptospira interrogans serovar Lai str. 56601]
          Length = 201

 Score = 62.8 bits (151), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 46/151 (30%), Positives = 71/151 (47%), Gaps = 4/151 (2%)

Query: 1   MKKGNVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           ++  N  +S  L + +N   R+  EIP         K+IS   N   +  D + H+EIL 
Sbjct: 49  IRTDNKILSDFLNKLENLVTRDREEIPSFTRIYHKEKLISETFNEVEKKSDSSFHSEILC 108

Query: 59  IRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
           IR     L    L +  L  +LEPC MCA  I L+RI ++ Y     +G GI +      
Sbjct: 109 IRNAKEKLKTRYLADCMLITSLEPCLMCAGTILLSRIPKVVYLLPAKQGEGI-SSLSIEM 167

Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
           + + +  PE++  I  + S+   + FFK RR
Sbjct: 168 IYSRNFFPELF-CIPTEISKNAFKSFFKVRR 197


>gi|114609581|ref|XP_001172262.1| PREDICTED: hypothetical protein LOC463037 isoform 1 [Pan
           troglodytes]
 gi|31874632|emb|CAD98054.1| hypothetical protein [Homo sapiens]
 gi|119568253|gb|EAW47868.1| deaminase domain containing 1, isoform CRA_b [Homo sapiens]
 gi|193785142|dbj|BAG54295.1| unnamed protein product [Homo sapiens]
          Length = 144

 Score = 62.8 bits (151), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 38/125 (30%), Positives = 64/125 (51%), Gaps = 8/125 (6%)

Query: 31  VLNNKIISRAGNRNRELKDVTAHAEILAIRM---GCRILSQ---EILPEVDLYVTLEPCT 84
           V NN+++ +  N   + K+ T HAE++AI      CR   +   E+     LYVT+EPC 
Sbjct: 2   VYNNEVVGKGRNEVNQTKNATRHAEMVAIDQVLDWCRQSGKSPSEVFEHTVLYVTVEPCI 61

Query: 85  MCAAAISLARIRRLYYGASNPKGGGIENGTQFYT--LATCHHSPEIYPGISEQRSRQIIQ 142
           MCAAA+ L +I  + YG  N + GG  +     +  L       +  PG   + + ++++
Sbjct: 62  MCAAALRLMKIPLVVYGCQNERFGGCGSVLNIASADLPNTGRPFQCIPGYRAEEAVEMLK 121

Query: 143 DFFKE 147
            F+K+
Sbjct: 122 TFYKQ 126


>gi|193212272|ref|YP_001998225.1| CMP/dCMP deaminase zinc-binding [Chlorobaculum parvum NCIB 8327]
 gi|193085749|gb|ACF11025.1| CMP/dCMP deaminase zinc-binding [Chlorobaculum parvum NCIB 8327]
          Length = 148

 Score = 62.8 bits (151), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 42/108 (38%), Positives = 55/108 (50%), Gaps = 4/108 (3%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M +   FM+ ALE+A+ +     +PVGAV V N K+I+   N+  +  D  AH E+  IR
Sbjct: 1   MDRDREFMALALEQARKSYEEGGVPVGAVMVENGKLIAAGHNQRVQNADPIAHGEMDCIR 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS-NPKG 107
              R    +    V LY TL PC MCA AI    I R+  G   N KG
Sbjct: 61  KAGRRARYDT---VTLYTTLSPCMMCAGAIVQFGIGRVVVGEDRNFKG 105


>gi|256392662|ref|YP_003114226.1| CMP/dCMP deaminase zinc-binding [Catenulispora acidiphila DSM
           44928]
 gi|256358888|gb|ACU72385.1| CMP/dCMP deaminase zinc-binding [Catenulispora acidiphila DSM
           44928]
          Length = 223

 Score = 62.8 bits (151), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 37/102 (36%), Positives = 51/102 (50%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           +  + ++  A+  AQ+       P GAV V +  +I+   N      D TAHAE+LAIR 
Sbjct: 71  QASDDWLGQAIALAQDNVEAGGWPFGAVIVRDGAVIATGVNEVLADGDPTAHAEMLAIRE 130

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
            CR+L    L    LY + EPC MC AAI  A +  + Y A 
Sbjct: 131 ACRVLKDINLAGAVLYASCEPCPMCLAAIKWAGLTGIVYAAD 172


>gi|104782249|ref|YP_608747.1| deaminase [Pseudomonas entomophila L48]
 gi|95111236|emb|CAK15956.1| putative deaminase [Pseudomonas entomophila L48]
          Length = 152

 Score = 62.8 bits (151), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 35/103 (33%), Positives = 52/103 (50%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
             +M  AL+ A+        P GAV V   ++I+RA N     +D T HAE+ AIR    
Sbjct: 4   ETYMREALDLARANIQAGGRPFGAVLVYQGRVIARAVNEIHSTQDPTRHAEMQAIRQASE 63

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKG 107
           +L +  L   ++Y +  PC MC AA+ L  I R ++   N +G
Sbjct: 64  VLGRARLDGAEIYASGHPCPMCLAAMHLCGIERAWFAYDNEEG 106


>gi|302803749|ref|XP_002983627.1| hypothetical protein SELMODRAFT_228959 [Selaginella moellendorffii]
 gi|300148464|gb|EFJ15123.1| hypothetical protein SELMODRAFT_228959 [Selaginella moellendorffii]
          Length = 216

 Score = 62.8 bits (151), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 39/97 (40%), Positives = 59/97 (60%), Gaps = 1/97 (1%)

Query: 7   FMSCALEEA-QNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           F+S A++EA +     +  P GAV V NN+++    N      D TAHAE+ A+R  C+ 
Sbjct: 64  FLSKAVDEAYKGVTCGDGGPFGAVVVRNNEVVVSCHNMVLRHTDPTAHAEVTAVREACKK 123

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGA 102
           L++  L + +++ + EPC MC  AI L+RI+RL YGA
Sbjct: 124 LNRLELSDCEIFASCEPCPMCFGAIHLSRIKRLVYGA 160


>gi|206561430|ref|YP_002232195.1| putative guanine/cytidine deaminase [Burkholderia cenocepacia
           J2315]
 gi|198037472|emb|CAR53408.1| putative guanine/cytidine deaminase [Burkholderia cenocepacia
           J2315]
          Length = 159

 Score = 62.8 bits (151), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 32/92 (34%), Positives = 49/92 (53%)

Query: 16  QNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVD 75
           +N   R   P GAV V + K+++R+ N      D +AHAE+ A+R   + L    L    
Sbjct: 21  ENVRERKTWPFGAVLVRDGKVLARSVNEVEATCDPSAHAEMQAVRAASKALGSTDLSGAV 80

Query: 76  LYVTLEPCTMCAAAISLARIRRLYYGASNPKG 107
           +Y +  PC+MC +A+ LA +  +YY  SN  G
Sbjct: 81  MYASGYPCSMCLSAMYLAGVSEVYYAYSNEDG 112


>gi|158334126|ref|YP_001515298.1| cytosine/adenosine deaminase [Acaryochloris marina MBIC11017]
 gi|158304367|gb|ABW25984.1| Cytosine/adenosine deaminase [Acaryochloris marina MBIC11017]
          Length = 150

 Score = 62.8 bits (151), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 35/100 (35%), Positives = 52/100 (52%), Gaps = 1/100 (1%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           ++FM  A++EAQ       IP+G+V V N  I+ R  N   +      HAE+ A+    R
Sbjct: 4   DLFMDAAIQEAQRGLAAGGIPIGSVVVKNGTIVGRGHNLRVQQGSAILHAEMSALETLGR 63

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASN 104
             +     +V LY TL PC+MC  AI L +I R+  G ++
Sbjct: 64  QPAM-FYQDVTLYTTLSPCSMCTGAILLYKIPRVVIGENH 102


>gi|296130628|ref|YP_003637878.1| Guanine deaminase [Cellulomonas flavigena DSM 20109]
 gi|296022443|gb|ADG75679.1| Guanine deaminase [Cellulomonas flavigena DSM 20109]
          Length = 186

 Score = 62.8 bits (151), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 37/97 (38%), Positives = 50/97 (51%), Gaps = 3/97 (3%)

Query: 25  PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84
           P GAV V +   ++   NR     D TAHAE+ AIR  CR      L  + LY + EPC 
Sbjct: 54  PFGAVVVADGVEVAVGQNRVTRDLDPTAHAEVQAIRAACRAADTFALDGMTLYTSCEPCP 113

Query: 85  MCAAAISLARIRRLYYGAS--NPKGGGIENGTQFYTL 119
           +C AA   AR+ R+ + A   +   GG ++ T FY L
Sbjct: 114 LCLAACLWARLDRVVFSADRHDASRGGFDD-TAFYEL 149


>gi|42560609|ref|NP_975060.1| cytosine deaminase [Mycoplasma mycoides subsp. mycoides SC str.
           PG1]
 gi|42492105|emb|CAE76702.1| CYTOSINE DEAMINASE [Mycoplasma mycoides subsp. mycoides SC str.
           PG1]
          Length = 155

 Score = 62.8 bits (151), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 40/114 (35%), Positives = 58/114 (50%), Gaps = 2/114 (1%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAI 59
           M   N  +   + +++ A   N+IPV    +  NN I+S + N   + KD++ HAEI AI
Sbjct: 9   MDDFNNILDLMIYQSKKAIKHNDIPVCCCIIDDNNNILSMSINTRYKNKDISQHAEINAI 68

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENG 113
                 L+   L E  L  TLEPC MC +AI   +I  +YY   + K  GI+N 
Sbjct: 69  NKLINKLNTFNLSEYKLITTLEPCMMCYSAIKQVKIDTIYYLVDSYK-FGIQNN 121


>gi|332293298|ref|YP_004431907.1| CMP/dCMP deaminase zinc-binding protein [Krokinobacter diaphorus
           4H-3-7-5]
 gi|332171384|gb|AEE20639.1| CMP/dCMP deaminase zinc-binding protein [Krokinobacter diaphorus
           4H-3-7-5]
          Length = 147

 Score = 62.8 bits (151), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 34/96 (35%), Positives = 47/96 (48%), Gaps = 2/96 (2%)

Query: 25  PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84
             GAV V + ++I+   N     +D T HAE+  I++ C+ L  + L + DLY +  PC 
Sbjct: 26  AFGAVIVRSGQVIAACHNLVGGSQDPTQHAELRCIQLACKALGTKDLSDCDLYTSCVPCM 85

Query: 85  MCAAAISLARIRRLYYGASN--PKGGGIENGTQFYT 118
           MC  A   AR   +YYGAS    K  G      FY 
Sbjct: 86  MCLGAARWARFENIYYGASAAMAKDAGFIYSDMFYA 121


>gi|329928171|ref|ZP_08282117.1| guanine deaminase [Paenibacillus sp. HGF5]
 gi|328938048|gb|EGG34447.1| guanine deaminase [Paenibacillus sp. HGF5]
          Length = 188

 Score = 62.8 bits (151), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 38/111 (34%), Positives = 51/111 (45%), Gaps = 1/111 (0%)

Query: 7   FMSCALEEAQ-NAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           +M  A+ EA  N       P GA+ V + ++I R  N    L D TAHAE+ AIR  C  
Sbjct: 38  WMHQAIAEAHRNVQHVEGGPFGAIVVKDGQVIGRGRNLVTALNDPTAHAEVQAIREACLH 97

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116
           L    L    +Y + EPC MC  AI  +R   +YY ++      I     F
Sbjct: 98  LEDFQLKGCTIYTSCEPCPMCLGAIYWSRPDAVYYASTKQDAAEIGFDDHF 148


>gi|256080812|ref|XP_002576670.1| cytidine/deoxycytidylate deaminase-related [Schistosoma mansoni]
 gi|238661949|emb|CAZ32907.1| cytidine/deoxycytidylate deaminase-related [Schistosoma mansoni]
          Length = 89

 Score = 62.4 bits (150), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 38/89 (42%), Positives = 49/89 (55%), Gaps = 6/89 (6%)

Query: 8  MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR---MGCR 64
          M  A E A  A   NE+PVG   V N ++I+   N     +D T HAE++ IR     CR
Sbjct: 1  MDIAFELACEALRCNEVPVGCAFVYNGEVIASGRNEVNATRDATQHAEMVTIRRLEQWCR 60

Query: 65 ILSQE---ILPEVDLYVTLEPCTMCAAAI 90
             +E   IL E DL+VT+EPC MC AA+
Sbjct: 61 NNQKELDKILVECDLFVTVEPCIMCTAAV 89


>gi|110003913|emb|CAK98253.1| putative cytidine and deoxycytidylate deaminase protein
           [Spiroplasma citri]
          Length = 159

 Score = 62.4 bits (150), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 37/117 (31%), Positives = 60/117 (51%), Gaps = 2/117 (1%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAI 59
           MK   +  +   + +Q A  +  +P+ A+ V  N KII+   N+  +   VT HAEI A+
Sbjct: 13  MKDTTLIFNKLYKLSQRAYKKKHVPISALVVDRNGKIIAIGYNKTTK-NSVTTHAEIFAL 71

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116
              CR      + +  ++VT+EPC MC  AI  + I+ + Y  SN K G +++   F
Sbjct: 72  NQACRKKRTNKISDCSIWVTVEPCMMCLGAIINSGIKVINYYLSNEKYGFLKSNHTF 128


>gi|156387793|ref|XP_001634387.1| predicted protein [Nematostella vectensis]
 gi|156221469|gb|EDO42324.1| predicted protein [Nematostella vectensis]
          Length = 96

 Score = 62.4 bits (150), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 33/70 (47%), Positives = 38/70 (54%)

Query: 25 PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84
          P GAV   +NKII+   N +    D TAHAE+ AIR  C  L    L   DLY +  PC 
Sbjct: 27 PFGAVITKDNKIIAETANLSFVNCDPTAHAEVSAIRQACSALKSRDLTGCDLYTSCYPCA 86

Query: 85 MCAAAISLAR 94
          MC AAI  AR
Sbjct: 87 MCMAAIYWAR 96


>gi|330955311|gb|EGH55571.1| cytosine deaminase [Pseudomonas syringae Cit 7]
          Length = 145

 Score = 62.4 bits (150), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 37/97 (38%), Positives = 48/97 (49%), Gaps = 1/97 (1%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           + FM  A +EAQ       IP+G+V V   KII R  NR  +    T H E+ A+    R
Sbjct: 2   DAFMQAAFDEAQLGLKEGGIPIGSVIVHGGKIIGRGHNRRVQEGSATKHGEMDALENAGR 61

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
             +      V LY TL PC MC+ AI L  IR++  G
Sbjct: 62  QPASVYRNSV-LYTTLSPCAMCSGAILLYGIRKVIIG 97


>gi|119511953|ref|ZP_01631050.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [Nodularia
           spumigena CCY9414]
 gi|119463373|gb|EAW44313.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [Nodularia
           spumigena CCY9414]
          Length = 143

 Score = 62.4 bits (150), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 39/97 (40%), Positives = 51/97 (52%), Gaps = 4/97 (4%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  ALEEA+    + + P GAV V + ++++ A N  +   D +AHAEI  IR     L
Sbjct: 6   FMQIALEEAK----KGDAPYGAVIVKHQEVVAVAHNTVKGNSDPSAHAEINVIRSLTAKL 61

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
               L    +Y T EPC MCA A   A I  + YGAS
Sbjct: 62  KSPSLEGYSIYTTGEPCPMCATACVWAGISEIVYGAS 98


>gi|224367573|ref|YP_002601736.1| putative cytidine/deoxycytidylate deaminase [Desulfobacterium
           autotrophicum HRM2]
 gi|223690289|gb|ACN13572.1| putative cytidine/deoxycytidylate deaminase [Desulfobacterium
           autotrophicum HRM2]
          Length = 181

 Score = 62.4 bits (150), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 47/158 (29%), Positives = 77/158 (48%), Gaps = 28/158 (17%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIIS---RAGN-----RNRELKDVTAHAEILA 58
           +M  AL  AQ A  + E PVGAV V + ++++   R G      R  E+     HAE+ A
Sbjct: 13  YMELALASAQKAFDQGEFPVGAVIVCDGRVVAQGHRVGTGALTGRPSEID----HAEMRA 68

Query: 59  IRMGCRILSQEILP------EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI-- 110
           ++        E LP         ++ T+EPC MC +AI L+ I+++ Y   +P GGG   
Sbjct: 69  LK------ELEGLPLGFDPAGAVIFSTMEPCLMCFSAIILSGIKKIVYAYEDPMGGGTCC 122

Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKER 148
           + G       TC    +++PG+  ++S  +   FF++ 
Sbjct: 123 DLGQLPPLYKTC--GIKVFPGVLRKKSLDLFVKFFQKE 158


>gi|160938326|ref|ZP_02085681.1| hypothetical protein CLOBOL_03223 [Clostridium bolteae ATCC
           BAA-613]
 gi|158438699|gb|EDP16456.1| hypothetical protein CLOBOL_03223 [Clostridium bolteae ATCC
           BAA-613]
          Length = 155

 Score = 62.4 bits (150), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 46/151 (30%), Positives = 67/151 (44%), Gaps = 4/151 (2%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M    +FM  A+  +Q A      P GAV V + +II    N+     D T HAE   +R
Sbjct: 1   MMNDEIFMKEAIRLSQLAVSHGNEPFGAVLVKDGEIIFSNENQIYTGSDPTFHAEAGLLR 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI--ENGTQFYT 118
             C       L E  LY + EPC MC  A+   ++ RL YGAS+     I  E G +   
Sbjct: 61  RFCAETHITDLREYTLYSSCEPCFMCCGAMVWTKLGRLVYGASDIDLCSILHEKGAECCK 120

Query: 119 LATCH--HSPEIYPGISEQRSRQIIQDFFKE 147
           +   H    P++  G+    S +I+  +F +
Sbjct: 121 IVFEHSPWKPQVTSGVLRDESLKILTAYFSK 151


>gi|126655546|ref|ZP_01726985.1| cytosine deaminase [Cyanothece sp. CCY0110]
 gi|126623025|gb|EAZ93730.1| cytosine deaminase [Cyanothece sp. CCY0110]
          Length = 145

 Score = 62.4 bits (150), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 36/97 (37%), Positives = 52/97 (53%), Gaps = 3/97 (3%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           F+  A+ EA+       IP+G+V V +NKII R  N+  +  D   HAEI  +R   RI 
Sbjct: 6   FIKAAIAEAKQGLKTGGIPIGSVLVKDNKIIGRGHNKRVQEGDPITHAEIDCLRNAGRIG 65

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
           S +   +  LY TL PC +CA A+    I+++  G S
Sbjct: 66  SYQ---DTVLYSTLMPCYLCAGAVVQFNIKKVIAGES 99


>gi|313203297|ref|YP_004041954.1| cmp/dcmp deaminase zinc-binding protein [Paludibacter
           propionicigenes WB4]
 gi|312442613|gb|ADQ78969.1| CMP/dCMP deaminase zinc-binding protein [Paludibacter
           propionicigenes WB4]
          Length = 156

 Score = 62.4 bits (150), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 38/119 (31%), Positives = 54/119 (45%), Gaps = 5/119 (4%)

Query: 25  PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84
           P  AV V   KII+   NR     D TAHAE+ AIR   + L    L   ++Y + EPC 
Sbjct: 25  PFAAVIVKEGKIIATGANRVTANTDPTAHAEVNAIRKAAKKLGTFDLSGCEIYTSCEPCP 84

Query: 85  MCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQD 143
           MC  A+  A + ++YYG +      I     F      +   E+ P     +S Q++ D
Sbjct: 85  MCLGAVYWAHLDKMYYGNTKADAKNIGFDDSF-----IYDEIELKPENRRLQSVQLLPD 138


>gi|17230776|ref|NP_487324.1| cytosine deaminase [Nostoc sp. PCC 7120]
 gi|17132379|dbj|BAB74983.1| cytosine deaminase [Nostoc sp. PCC 7120]
          Length = 143

 Score = 62.4 bits (150), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 35/97 (36%), Positives = 51/97 (52%), Gaps = 3/97 (3%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  A++EA+       IP+G+V V + KI+ R  N+  + +D   HAEI  +R   RI 
Sbjct: 4   FMQAAIQEAKQGRQEGGIPIGSVLVKDGKILGRGHNKRVQDRDPVTHAEIDCLRNAGRIG 63

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
           S        LY TL PC +CA A+    I+++  G S
Sbjct: 64  SYR---GTTLYSTLMPCYLCAGAVVQFGIKKVIVGES 97


>gi|302833465|ref|XP_002948296.1| hypothetical protein VOLCADRAFT_73641 [Volvox carteri f.
           nagariensis]
 gi|300266516|gb|EFJ50703.1| hypothetical protein VOLCADRAFT_73641 [Volvox carteri f.
           nagariensis]
          Length = 172

 Score = 62.4 bits (150), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 41/106 (38%), Positives = 60/106 (56%), Gaps = 4/106 (3%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM---GCR 64
           M  AL +A +A    E+PVG V V +  ++ R  N   + ++ T HAE++AI      C 
Sbjct: 1   MCQALAQAHDAWACREVPVGCVVVRDGDVVGRGHNLTNKTRNGTRHAEMIAIDQILAACG 60

Query: 65  ILSQEILPE-VDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109
              Q+   E  DLYVT+EPC MCA A+SL   R++++G  N + GG
Sbjct: 61  GAVQDAAFERCDLYVTVEPCIMCAGALSLLGFRKVFFGCGNDRFGG 106


>gi|87120113|ref|ZP_01076009.1| cytosine deaminase [Marinomonas sp. MED121]
 gi|86164815|gb|EAQ66084.1| cytosine deaminase [Marinomonas sp. MED121]
          Length = 173

 Score = 62.4 bits (150), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 41/154 (26%), Positives = 72/154 (46%), Gaps = 12/154 (7%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           ++ N ++   L  +Q A      P GA+ V++N++   A N      D T HAE+  +  
Sbjct: 16  EQDNHWLKQTLNLSQAAVDAGNHPFGALLVIDNRLALEAENTVNTYNDATRHAEMNLVSQ 75

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
            C+ LS+    E  LY + EPC MCA AI  + I+++ Y  S  +   I   +       
Sbjct: 76  ACQNLSESQRKEAVLYTSTEPCAMCAGAIYWSGIKQVVYACSGSELNEIAGKSLI----- 130

Query: 122 CHHSPEIY------PGISEQRSRQIIQDFFKERR 149
           C HS E++      P +   +S+ +I+   ++ +
Sbjct: 131 C-HSEEVFLGAVNPPSVRSTQSQSLIEQACEQHK 163


>gi|56751392|ref|YP_172093.1| hypothetical protein syc1383_d [Synechococcus elongatus PCC 6301]
 gi|56686351|dbj|BAD79573.1| hypothetical protein [Synechococcus elongatus PCC 6301]
          Length = 161

 Score = 62.4 bits (150), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 32/77 (41%), Positives = 42/77 (54%)

Query: 25  PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84
           P G V   N +II+   N+    +D T HAEI AIR  C+ L    L    LY + EPC 
Sbjct: 29  PFGCVITRNGEIIAEGFNQVLTERDPTWHAEIAAIRQACQHLQTVDLSGCTLYTSAEPCP 88

Query: 85  MCAAAISLARIRRLYYG 101
           MCAAA+  A++ RL + 
Sbjct: 89  MCAAAVYWAKLERLVFA 105


>gi|58617314|ref|YP_196513.1| hypothetical protein ERGA_CDS_05870 [Ehrlichia ruminantium str.
           Gardel]
 gi|58416926|emb|CAI28039.1| Hypothetical protein ERGA_CDS_05870 [Ehrlichia ruminantium str.
           Gardel]
          Length = 62

 Score = 62.4 bits (150), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 28/59 (47%), Positives = 38/59 (64%), Gaps = 2/59 (3%)

Query: 85  MCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQD 143
           MCA AIS  RI RLY+G  N K GG+ENG + +    CH  PE+Y GI E+ + ++I +
Sbjct: 1   MCAQAISFTRIHRLYFGVYNKKYGGVENGARVFHF--CHSIPEVYGGILEEENMKLITN 57


>gi|325978643|ref|YP_004288359.1| guanine deaminase [Streptococcus gallolyticus subsp. gallolyticus
           ATCC BAA-2069]
 gi|325178571|emb|CBZ48615.1| guanine deaminase [Streptococcus gallolyticus subsp. gallolyticus
           ATCC BAA-2069]
          Length = 154

 Score = 62.4 bits (150), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 35/98 (35%), Positives = 50/98 (51%), Gaps = 1/98 (1%)

Query: 7   FMSCALEEAQNAALRNEI-PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           +M  A++EA +   + +  P G+V V + +II+   N      D TAH E+ AIR     
Sbjct: 5   YMQKAIQEAYDGIKKGDGGPFGSVIVKDGEIIASGHNMVLAHHDPTAHGEVTAIRKAGEK 64

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
           L    L    L+ T EPC MC AA   A I ++YYG +
Sbjct: 65  LGTHDLSGTTLFTTGEPCPMCLAACLWANIDKIYYGCT 102


>gi|172038865|ref|YP_001805366.1| cytosine deaminase [Cyanothece sp. ATCC 51142]
 gi|171700319|gb|ACB53300.1| probable cytosine deaminase [Cyanothece sp. ATCC 51142]
          Length = 150

 Score = 62.4 bits (150), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 36/97 (37%), Positives = 52/97 (53%), Gaps = 3/97 (3%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  A+ EA+       IP+G+V V +NKII R  N+  +  D   HAEI  +R   RI 
Sbjct: 11  FMKAAIAEAKQGLKTGGIPIGSVLVKHNKIIGRGHNKRVQDGDPITHAEIDCLRNAGRIG 70

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
           + +   +  LY TL PC +CA A+    I+++  G S
Sbjct: 71  NYQ---DTVLYSTLMPCYLCAGAVVQFNIKKVIAGES 104


>gi|58579260|ref|YP_197472.1| hypothetical protein ERWE_CDS_05960 [Ehrlichia ruminantium str.
           Welgevonden]
 gi|58417886|emb|CAI27090.1| Hypothetical protein ERWE_CDS_05960 [Ehrlichia ruminantium str.
           Welgevonden]
          Length = 62

 Score = 62.4 bits (150), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 28/59 (47%), Positives = 39/59 (66%), Gaps = 2/59 (3%)

Query: 85  MCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQD 143
           MCA AIS ARI RLY+G  N K GG+ENG + +    CH  PE+Y GI ++ + ++I +
Sbjct: 1   MCAQAISFARIHRLYFGVYNKKYGGVENGARVFHF--CHSIPEVYGGILKEENMKLITN 57


>gi|126651196|ref|ZP_01723406.1| Guanine deaminase [Bacillus sp. B14905]
 gi|126592034|gb|EAZ86100.1| Guanine deaminase [Bacillus sp. B14905]
          Length = 152

 Score = 62.4 bits (150), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 31/76 (40%), Positives = 44/76 (57%)

Query: 25  PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84
           P GA  V  ++II+  GN      D+TAHAEI+AIR   + L    L +  +Y T EPC 
Sbjct: 22  PFGATIVRGDEIIAVVGNTMMRDTDITAHAEIVAIREASKKLGTMDLSDCVIYATCEPCP 81

Query: 85  MCAAAISLARIRRLYY 100
           MC +AI  + I+ ++Y
Sbjct: 82  MCVSAIIWSGIKEVHY 97


>gi|227824209|ref|YP_002828182.1| CMP/dCMP deaminase, zinc-binding [Sinorhizobium fredii NGR234]
 gi|227343211|gb|ACP27429.1| CMP/dCMP deaminase, zinc-binding [Sinorhizobium fredii NGR234]
          Length = 171

 Score = 62.4 bits (150), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 41/138 (29%), Positives = 67/138 (48%), Gaps = 7/138 (5%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M++   F+  A+  A+    +   P GAV V N ++I R  N   +  D T+HAE+ A+R
Sbjct: 19  MQEEERFLREAVSLARTNLEKGGRPFGAVVVRNGEVIGRGVNEMLDTGDPTSHAELNAVR 78

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              + ++   L +  +Y +  PC MC AA+ +A I  + Y  SN  G       + Y L+
Sbjct: 79  AAAKTIASLRLEDATVYASGHPCPMCLAAMRMAGITEIAYAHSNEDG-------EPYGLS 131

Query: 121 TCHHSPEIYPGISEQRSR 138
           T     E+   ++EQ  R
Sbjct: 132 TAAIYAELAKPLAEQAMR 149


>gi|322433246|ref|YP_004210467.1| CMP/dCMP deaminase zinc-binding protein [Acidobacterium sp.
           MP5ACTX9]
 gi|321165638|gb|ADW71340.1| CMP/dCMP deaminase zinc-binding protein [Acidobacterium sp.
           MP5ACTX9]
          Length = 168

 Score = 62.4 bits (150), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 41/105 (39%), Positives = 54/105 (51%), Gaps = 7/105 (6%)

Query: 3   KGNVFMSCALEEAQNAALRNEIP----VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           K   FM+ ALE+A+   +  E P    VG V V N  I+  + N      D TAHAE++ 
Sbjct: 5   KDLTFMAAALEQAR---IGQETPGGAQVGCVLVENGAIVCSSFNEGDLQFDPTAHAEMVG 61

Query: 59  IRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
           IR  C+      L  V +Y TL+PC MC  A   A + R+ YGAS
Sbjct: 62  IRRLCKERRSISLKGVTVYCTLQPCGMCTMACLWAGVSRIVYGAS 106


>gi|148266168|ref|YP_001232874.1| CMP/dCMP deaminase, zinc-binding [Geobacter uraniireducens Rf4]
 gi|146399668|gb|ABQ28301.1| CMP/dCMP deaminase, zinc-binding protein [Geobacter uraniireducens
           Rf4]
          Length = 160

 Score = 62.4 bits (150), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 36/97 (37%), Positives = 48/97 (49%), Gaps = 1/97 (1%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           + FM  AL EA+       IP+G+V V N +II R  NR  +      H E+ A+    R
Sbjct: 17  DTFMQAALAEAKQGQAEGGIPIGSVIVHNGRIIGRGHNRRVQKGSAILHGEMDALENAGR 76

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
             +  +  E  LY TL PC MC+ AI L  I R+  G
Sbjct: 77  -QTAAVYRECTLYTTLSPCAMCSGAILLYGIPRVIVG 112


>gi|83319309|ref|YP_424006.1| cytidine/deoxycytidylate deaminase zinc-binding domain-containing
           protein [Mycoplasma capricolum subsp. capricolum ATCC
           27343]
 gi|83283195|gb|ABC01127.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein
           [Mycoplasma capricolum subsp. capricolum ATCC 27343]
          Length = 147

 Score = 62.0 bits (149), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 38/109 (34%), Positives = 54/109 (49%), Gaps = 1/109 (0%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAI 59
           M   N  +   + E++ A   N+IPV    +  NN I+S A N   + KD++ HAEI  I
Sbjct: 1   MDDFNNILDLLINESKKAIKHNDIPVSCCIIDSNNNILSLAINSRYKNKDISQHAEINVI 60

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGG 108
                 L+   L +  L  TLEPC MC +AI   +I  +YY   + K G
Sbjct: 61  NDLISKLNSFNLSKYKLITTLEPCMMCYSAIKQVKINTIYYLVDSYKFG 109


>gi|317476774|ref|ZP_07936017.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Bacteroides eggerthii 1_2_48FAA]
 gi|316906949|gb|EFV28660.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Bacteroides eggerthii 1_2_48FAA]
          Length = 187

 Score = 62.0 bits (149), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 33/92 (35%), Positives = 48/92 (52%)

Query: 25  PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84
           P GAV V + ++I+   NR     D TAHAE+ AIR  C+ L    L    +Y + EPC 
Sbjct: 56  PFGAVIVRDGEVIATGVNRVVPNNDPTAHAEVNAIRNACQKLDTFQLEGCTVYSSCEPCP 115

Query: 85  MCAAAISLARIRRLYYGASNPKGGGIENGTQF 116
           MC +A+  A ++R+ YG +      I+    F
Sbjct: 116 MCLSALYWAGVKRICYGNTKADAKAIDFDDSF 147


>gi|196014346|ref|XP_002117032.1| hypothetical protein TRIADDRAFT_50979 [Trichoplax adhaerens]
 gi|190580254|gb|EDV20338.1| hypothetical protein TRIADDRAFT_50979 [Trichoplax adhaerens]
          Length = 151

 Score = 62.0 bits (149), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 36/92 (39%), Positives = 51/92 (55%), Gaps = 6/92 (6%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           N +M  A E A  A +  E+PVG V V  NKII +  N   E+K+ T HAE++AI    +
Sbjct: 9   NEWMEIAFELANEALVAGEVPVGCVLVFGNKIIGKGRNEVNEVKNATRHAEMVAIEEAYK 68

Query: 65  IL-SQEILPEV-----DLYVTLEPCTMCAAAI 90
              + ++ P V      L VT+EPC MC+ A+
Sbjct: 69  WCENNQVRPSVAFSNSQLLVTVEPCIMCSMAL 100


>gi|301320513|gb|ADK69156.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Mycoplasma mycoides subsp. mycoides SC str. Gladysdale]
          Length = 147

 Score = 62.0 bits (149), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 40/114 (35%), Positives = 58/114 (50%), Gaps = 2/114 (1%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAI 59
           M   N  +   + +++ A   N+IPV    +  NN I+S + N   + KD++ HAEI AI
Sbjct: 1   MDDFNNILDLMIYQSKKAIKHNDIPVCCCIIDDNNNILSMSINTRYKNKDISQHAEINAI 60

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENG 113
                 L+   L E  L  TLEPC MC +AI   +I  +YY   + K  GI+N 
Sbjct: 61  NKLINKLNTFNLSEYKLITTLEPCMMCYSAIKQVKIDTIYYLVDSYK-FGIQNN 113


>gi|45659288|ref|YP_003374.1| cytidine deaminase [Leptospira interrogans serovar Copenhageni str.
           Fiocruz L1-130]
 gi|45602534|gb|AAS72011.1| cytidine deaminase [Leptospira interrogans serovar Copenhageni str.
           Fiocruz L1-130]
          Length = 201

 Score = 62.0 bits (149), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 46/151 (30%), Positives = 70/151 (46%), Gaps = 4/151 (2%)

Query: 1   MKKGNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           ++  N  +S  L + +N     R EIP         K+IS   N   +  D + H+EIL 
Sbjct: 49  IRTDNKILSDFLNKLENLVTRYREEIPSFTRIYHKEKLISETFNEVEKKSDSSFHSEILC 108

Query: 59  IRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
           IR     L    L +  L  +LEPC MCA  I L+RI ++ Y     +G GI +      
Sbjct: 109 IRNAKEKLKTRYLADCMLITSLEPCLMCAGTILLSRIPKVVYLLPAKQGEGI-SSLSIEM 167

Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
           + + +  PE++  I  + S+   + FFK RR
Sbjct: 168 IYSRNFFPELF-CIPTEISKNAFKSFFKVRR 197


>gi|81298931|ref|YP_399139.1| cytosine/adenosine deaminase-like [Synechococcus elongatus PCC
           7942]
 gi|81167812|gb|ABB56152.1| Cytosine/adenosine deaminases-like [Synechococcus elongatus PCC
           7942]
          Length = 161

 Score = 62.0 bits (149), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 32/77 (41%), Positives = 42/77 (54%)

Query: 25  PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84
           P G V   N +II+   N+    +D T HAEI AIR  C+ L    L    LY + EPC 
Sbjct: 29  PFGCVITRNGEIIAEGFNQVLTERDPTWHAEIAAIRQACQHLQTVDLSGCTLYTSAEPCP 88

Query: 85  MCAAAISLARIRRLYYG 101
           MCAAA+  A++ RL + 
Sbjct: 89  MCAAAVYWAKLDRLVFA 105


>gi|298244121|ref|ZP_06967927.1| CMP/dCMP deaminase zinc-binding [Ktedonobacter racemifer DSM 44963]
 gi|297551602|gb|EFH85467.1| CMP/dCMP deaminase zinc-binding [Ktedonobacter racemifer DSM 44963]
          Length = 170

 Score = 62.0 bits (149), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 39/96 (40%), Positives = 58/96 (60%), Gaps = 6/96 (6%)

Query: 17  NAALRNEIPVGAVAVLN--NKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQ---EIL 71
           NAAL ++  VG  A+L+  ++I+    N+ +E +D   HAE++ +R   R LSQ   E  
Sbjct: 24  NAAL-DKGSVGIAALLSRRDEILDLEHNQFQETRDAIDHAEMVVLRRMARYLSQLSEEEK 82

Query: 72  PEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKG 107
            E+ LY +LEPC MC AAIS A ++R+ + A N  G
Sbjct: 83  RELTLYSSLEPCLMCMAAISFAGLKRVVFSAYNADG 118


>gi|187250528|ref|YP_001875010.1| cytosine/adenosine deaminase [Elusimicrobium minutum Pei191]
 gi|186970688|gb|ACC97673.1| Cytosine/adenosine deaminase [Elusimicrobium minutum Pei191]
          Length = 163

 Score = 62.0 bits (149), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 31/79 (39%), Positives = 43/79 (54%)

Query: 25  PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84
           P GAV V + K++++  NR     D + HAE+ AIR  C+ L    L    +Y + EPC 
Sbjct: 32  PFGAVIVKDGKMVAKGYNRVTSSNDPSLHAEVDAIRKACKKLGSFELTGCIIYSSCEPCP 91

Query: 85  MCAAAISLARIRRLYYGAS 103
           MC  AI  AR + LY+ A 
Sbjct: 92  MCLGAIYWARPKALYFAAD 110


>gi|302817816|ref|XP_002990583.1| hypothetical protein SELMODRAFT_448085 [Selaginella moellendorffii]
 gi|300141751|gb|EFJ08460.1| hypothetical protein SELMODRAFT_448085 [Selaginella moellendorffii]
          Length = 1449

 Score = 62.0 bits (149), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 39/97 (40%), Positives = 59/97 (60%), Gaps = 1/97 (1%)

Query: 7   FMSCALEEA-QNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           F+S A++EA +     +  P GAV V NN+++    N      D TAHAE+ A+R  C+ 
Sbjct: 64  FLSKAVDEAYKGVTCGDGGPFGAVVVRNNEVVVSCHNMVLRHTDPTAHAEVTAVREACKK 123

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGA 102
           L++  L + +++ + EPC MC  AI L+RI+RL YGA
Sbjct: 124 LNRLELSDCEIFASCEPCPMCFGAIHLSRIKRLVYGA 160


>gi|322805608|emb|CBZ03173.1| tRNA-specific adenosine-34 deaminase [Clostridium botulinum H04402
           065]
          Length = 157

 Score = 62.0 bits (149), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 31/79 (39%), Positives = 44/79 (55%)

Query: 25  PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84
           P G+  V + ++I+ A N      D TAH E+  IR  C+ L+   L   +LY T EPC 
Sbjct: 25  PFGSAIVKDGEVIAVAHNTVVGDNDPTAHGEVNVIRKACKKLNTFDLSGCELYTTSEPCP 84

Query: 85  MCAAAISLARIRRLYYGAS 103
           MC +AI  A I ++YYG +
Sbjct: 85  MCMSAIIWANISKVYYGCT 103


>gi|218130011|ref|ZP_03458815.1| hypothetical protein BACEGG_01594 [Bacteroides eggerthii DSM 20697]
 gi|217987814|gb|EEC54140.1| hypothetical protein BACEGG_01594 [Bacteroides eggerthii DSM 20697]
          Length = 207

 Score = 62.0 bits (149), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 33/92 (35%), Positives = 48/92 (52%)

Query: 25  PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84
           P GAV V + ++I+   NR     D TAHAE+ AIR  C+ L    L    +Y + EPC 
Sbjct: 76  PFGAVIVRDGEVIATGVNRVVPNNDPTAHAEVNAIRNACQKLDTFQLEGCTVYSSCEPCP 135

Query: 85  MCAAAISLARIRRLYYGASNPKGGGIENGTQF 116
           MC +A+  A ++R+ YG +      I+    F
Sbjct: 136 MCLSALYWAGVKRICYGNTKADAKAIDFDDSF 167


>gi|194291404|ref|YP_002007311.1| guanine deaminase; cytidine and deoxycytidylate deaminase family
           [Cupriavidus taiwanensis LMG 19424]
 gi|193225308|emb|CAQ71250.1| Guanine deaminase; cytidine and deoxycytidylate deaminase family
           [Cupriavidus taiwanensis LMG 19424]
          Length = 155

 Score = 62.0 bits (149), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 33/93 (35%), Positives = 48/93 (51%)

Query: 16  QNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVD 75
           +N   RN  P GAV V +  +++RA N      D +AHAE+ A+R   R L +  L    
Sbjct: 17  ENVRERNTWPFGAVVVKDGTVLARAVNEVDATCDPSAHAEMQAVRAASRALGKPDLSGCT 76

Query: 76  LYVTLEPCTMCAAAISLARIRRLYYGASNPKGG 108
           +Y +  PC MC  A+ LA +  ++Y  SN  G 
Sbjct: 77  VYASGYPCPMCLTAMYLAGVEAVFYAYSNEDGA 109


>gi|226948555|ref|YP_002803646.1| guanine deaminase [Clostridium botulinum A2 str. Kyoto]
 gi|226842608|gb|ACO85274.1| guanine deaminase [Clostridium botulinum A2 str. Kyoto]
          Length = 157

 Score = 62.0 bits (149), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 31/79 (39%), Positives = 44/79 (55%)

Query: 25  PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84
           P G+  V + ++I+ A N      D TAH E+  IR  C+ L+   L   +LY T EPC 
Sbjct: 25  PFGSAIVKDGEVIAVAHNTVVGDNDPTAHGEVNVIRKACKKLNTFDLSGCELYTTSEPCP 84

Query: 85  MCAAAISLARIRRLYYGAS 103
           MC +AI  A I ++YYG +
Sbjct: 85  MCMSAIIWANISKVYYGCT 103


>gi|295442884|ref|NP_596505.2| tRNA specific adenosine deaminase subunit Tad2 (predicted)
           [Schizosaccharomyces pombe 972h-]
 gi|259016150|sp|O94642|TAD2_SCHPO RecName: Full=tRNA-specific adenosine deaminase subunit tad2;
           AltName: Full=tRNA-specific adenosine-34 deaminase
           subunit tad2
 gi|254745608|emb|CAB38514.2| tRNA specific adenosine deaminase subunit Tad2 (predicted)
           [Schizosaccharomyces pombe]
          Length = 389

 Score = 62.0 bits (149), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 35/121 (28%), Positives = 56/121 (46%)

Query: 25  PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84
           P   V V   ++I R  N          HAE++AI          +  E  LYVT+EPC 
Sbjct: 238 PGSCVFVYKGEVIGRGFNETNCSLSGIRHAELIAIEKILEHYPASVFKETTLYVTVEPCL 297

Query: 85  MCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
           MCAAA+    I+ +Y+G  N + GG  +        +   S  +YPG+    +  ++++F
Sbjct: 298 MCAAALKQLHIKAVYFGCGNDRFGGCGSVFSINKDQSIDPSYPVYPGLFYSEAVMLMREF 357

Query: 145 F 145
           +
Sbjct: 358 Y 358


>gi|324528898|gb|ADY48965.1| tRNA-specific adenosine deaminase 2 [Ascaris suum]
          Length = 134

 Score = 62.0 bits (149), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 27/81 (33%), Positives = 52/81 (64%), Gaps = 1/81 (1%)

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
           +EIL E  LYVT+EPC MCA A+   +++R+ YGA+N + GG+ +      + +  H  +
Sbjct: 19  KEILKETTLYVTIEPCIMCACALYYLKLKRIVYGAANERFGGLGSVAN-REMYSSKHLIQ 77

Query: 128 IYPGISEQRSRQIIQDFFKER 148
           I   + ++R+ ++++DF+ ++
Sbjct: 78  IDANVDKERAVKMLKDFYDQQ 98


>gi|306831703|ref|ZP_07464860.1| guanine deaminase [Streptococcus gallolyticus subsp. gallolyticus
           TX20005]
 gi|304426128|gb|EFM29243.1| guanine deaminase [Streptococcus gallolyticus subsp. gallolyticus
           TX20005]
          Length = 172

 Score = 62.0 bits (149), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 35/98 (35%), Positives = 50/98 (51%), Gaps = 1/98 (1%)

Query: 7   FMSCALEEAQNAALRNEI-PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           +M  A++EA +   + +  P G+V V + +II+   N      D TAH E+ AIR     
Sbjct: 23  YMQKAIQEAYDGIKKGDGGPFGSVIVKDGEIIASGHNMVLAHHDPTAHGEVTAIRKAGEK 82

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
           L    L    L+ T EPC MC AA   A I ++YYG +
Sbjct: 83  LGTHDLSGTTLFTTGEPCPMCLAACLWANIDKIYYGCT 120


>gi|219113417|ref|XP_002186292.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|209583142|gb|ACI65762.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 180

 Score = 62.0 bits (149), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 48/157 (30%), Positives = 72/157 (45%), Gaps = 21/157 (13%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNK----IISRAGNRNRELKDVTAHAEILAIRMGC 63
           M  AL  A+ A    E+PVG V V+  +    ++S   N+    +D T   E   IR G 
Sbjct: 1   MRQALRVAKAALDIGEVPVGCVIVMPTETGPVVVSHGANQVNATRDGTWKHEKQNIREGT 60

Query: 64  ------------RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIE 111
                       R    E L +  LYVT EPC MCAAA++  +I ++Y+G  N K GG  
Sbjct: 61  GEWRNAYGWGSGRRFKPEELKKCRLYVTCEPCIMCAAALAQVQISKVYFGCRNDKFGGCG 120

Query: 112 NGTQFYTLATCHHSPEIYP---GISEQRSRQIIQDFF 145
           +    +     HH+   YP   G+ E  +  +++ F+
Sbjct: 121 SILHLHKDHPPHHAG--YPVSGGMLEDDAVGLLRSFY 155


>gi|220919906|ref|YP_002495209.1| CMP/dCMP deaminase zinc-binding [Methylobacterium nodulans ORS
           2060]
 gi|219952326|gb|ACL62717.1| CMP/dCMP deaminase zinc-binding [Methylobacterium nodulans ORS
           2060]
          Length = 160

 Score = 61.6 bits (148), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 36/100 (36%), Positives = 51/100 (51%), Gaps = 2/100 (2%)

Query: 7   FMSCALEEAQNAALRNEIP--VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           FM+ A+E ++  +L        G V V + +I++   NR     D T H EI AIR  C+
Sbjct: 8   FMARAIELSEKTSLVESAGGVFGCVIVQDGEILAEGANRVVAENDPTWHGEIEAIRKACK 67

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASN 104
                 L +  LY + EPC MC AA   A I+ +YY A+N
Sbjct: 68  AQGSFKLRDATLYTSAEPCPMCMAAAYWAGIKAIYYAATN 107


>gi|302346851|ref|YP_003815149.1| guanine deaminase [Prevotella melaninogenica ATCC 25845]
 gi|302150909|gb|ADK97170.1| guanine deaminase [Prevotella melaninogenica ATCC 25845]
          Length = 155

 Score = 61.6 bits (148), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 35/110 (31%), Positives = 50/110 (45%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
            M  A+E + ++      P GAV   N +II+   N      D TAHAE+  IR  C+ L
Sbjct: 6   LMRRAIELSADSVRNGGGPFGAVIARNGEIIAEGSNGVTIYNDPTAHAEVSTIRKACQKL 65

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116
           +   L   ++Y + EPC MC  AI  A + ++YY         I     F
Sbjct: 66  NTFDLSGCEIYTSCEPCPMCFGAIYWAHLDKIYYANDRKDAADIGFDDDF 115


>gi|297582994|ref|YP_003698774.1| CMP/dCMP deaminase zinc-binding protein [Bacillus selenitireducens
           MLS10]
 gi|297141451|gb|ADH98208.1| CMP/dCMP deaminase zinc-binding protein [Bacillus selenitireducens
           MLS10]
          Length = 147

 Score = 61.6 bits (148), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 34/104 (32%), Positives = 55/104 (52%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  A+E A+ + +    P GA+ V + +++  A N+     D T H EI+ +R  CR  
Sbjct: 8   WMRQAIELARASKIAGNDPFGALLVKDGEVVMTATNQIHTATDPTHHPEIVLVRDYCRQE 67

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI 110
               L +V LY + EPC MC+ A+  + + RL Y  S+ +  GI
Sbjct: 68  GITDLKDVTLYTSCEPCVMCSGAMVWSNLGRLVYSVSHEQLLGI 111


>gi|146341264|ref|YP_001206312.1| putative cytidine/deoxycytidylate deaminase [Bradyrhizobium sp.
           ORS278]
 gi|146194070|emb|CAL78088.1| putative cytidine/deoxycytidylate deaminase [Bradyrhizobium sp.
           ORS278]
          Length = 165

 Score = 61.6 bits (148), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 39/104 (37%), Positives = 52/104 (50%), Gaps = 1/104 (0%)

Query: 1   MKKGNVFMSCALEEA-QNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
           +K    FM  A++ A Q+ A     P+G V VL + I++   N      D TAHAEI AI
Sbjct: 4   LKTDEHFMQEAIKIATQDGADPALSPIGCVIVLGSDIVAAERNHVAAKHDATAHAEIEAI 63

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
           R   R      L    LY TL+PC MC  A   +++ R+ YGA 
Sbjct: 64  RAAGRGFDDGELRGATLYTTLQPCGMCTMASIWSKVGRIVYGAG 107


>gi|288803845|ref|ZP_06409271.1| guanine deaminase [Prevotella melaninogenica D18]
 gi|288333679|gb|EFC72128.1| guanine deaminase [Prevotella melaninogenica D18]
          Length = 155

 Score = 61.6 bits (148), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 35/110 (31%), Positives = 50/110 (45%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
            M  A+E + ++      P GAV   N +II+   N      D TAHAE+  IR  C+ L
Sbjct: 6   LMRRAIELSADSVRNGGGPFGAVIARNGEIIAEGSNGVTIYNDPTAHAEVSTIRKACQKL 65

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116
           +   L   ++Y + EPC MC  AI  A + ++YY         I     F
Sbjct: 66  NTFDLSGCEIYTSCEPCPMCFGAIYWAHLDKIYYANDRKDAADIGFDDDF 115


>gi|15229953|ref|NP_187181.1| cytidine/deoxycytidylate deaminase family protein [Arabidopsis
           thaliana]
 gi|6729040|gb|AAF27036.1|AC009177_26 unknown protein [Arabidopsis thaliana]
 gi|332640696|gb|AEE74217.1| Cytidine/deoxycytidylate deaminase-like protein [Arabidopsis
           thaliana]
          Length = 113

 Score = 61.6 bits (148), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 28/55 (50%), Positives = 39/55 (70%)

Query: 48  KDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGA 102
           KD TAHAE++AIR  C+ L++  L E ++Y + EPC MC  AI L+R++RL Y A
Sbjct: 6   KDPTAHAEVIAIREACKKLNEIKLSECEIYASCEPCPMCFGAIHLSRLKRLVYEA 60


>gi|297582578|ref|YP_003698358.1| CMP/dCMP deaminase zinc-binding protein [Bacillus selenitireducens
           MLS10]
 gi|297141035|gb|ADH97792.1| CMP/dCMP deaminase zinc-binding protein [Bacillus selenitireducens
           MLS10]
          Length = 152

 Score = 61.6 bits (148), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 34/107 (31%), Positives = 51/107 (47%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  A++ A+ A      P GA+ V + +++ R  N      D T HAE+  IR  C   
Sbjct: 8   FMKQAIDLAKRAREEGNEPFGAILVKDGEVVMRGANHIHSGSDPTFHAELGLIRAYCSAY 67

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENG 113
               L E  LY + EPC MC+ A+  A + ++ Y  S+ +   I  G
Sbjct: 68  QVSDLSEYTLYTSCEPCVMCSGAMVWANLGKVVYSVSHDQLAEIAGG 114


>gi|147919375|ref|YP_686889.1| putative cytosine deaminase [uncultured methanogenic archaeon RC-I]
 gi|110622285|emb|CAJ37563.1| putative cytosine deaminase [uncultured methanogenic archaeon RC-I]
          Length = 144

 Score = 61.6 bits (148), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 53/100 (53%), Gaps = 3/100 (3%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           +VFM  A++EA+       IP+G+V V+N +I+    N+  +  D   HAEI  +R   R
Sbjct: 2   DVFMQAAIDEAKKGLAEGGIPIGSVMVINRRIVGSGHNKRVQDGDPVMHAEIDCLRSAGR 61

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASN 104
           +   +   +  LY TL PC +CA A+    I+++  G S 
Sbjct: 62  VGRYK---DAVLYSTLMPCYLCAGAVVQFGIKKVIVGESK 98


>gi|170761087|ref|YP_001786677.1| guanine deaminase [Clostridium botulinum A3 str. Loch Maree]
 gi|169408076|gb|ACA56487.1| guanine deaminase [Clostridium botulinum A3 str. Loch Maree]
          Length = 157

 Score = 61.6 bits (148), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 31/79 (39%), Positives = 44/79 (55%)

Query: 25  PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84
           P G+  V + ++I+ A N      D TAH E+  IR  C+ L+   L   +LY T EPC 
Sbjct: 25  PFGSAIVKDGEVIAVAHNTVIGDNDPTAHGEVNVIRKACKKLNTFDLSGCELYTTSEPCP 84

Query: 85  MCAAAISLARIRRLYYGAS 103
           MC +AI  A I ++YYG +
Sbjct: 85  MCMSAIIWANISKVYYGCT 103


>gi|326330934|ref|ZP_08197234.1| guanine deaminase [Nocardioidaceae bacterium Broad-1]
 gi|325951292|gb|EGD43332.1| guanine deaminase [Nocardioidaceae bacterium Broad-1]
          Length = 159

 Score = 61.6 bits (148), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 48/154 (31%), Positives = 67/154 (43%), Gaps = 22/154 (14%)

Query: 12  LEEAQNAALRN----EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           LE+A   A+RN      P GA+ + +  ++    NR     D +AHAEI+AIR  C+   
Sbjct: 7   LEQAVALAVRNVNNGGGPFGAIILRDGILLGTGQNRVTRDLDPSAHAEIVAIRSACKEAD 66

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGA--SNPKGGGIENGTQFYTL-----A 120
              L    LY + EPC MC A    AR+ R+ Y A   +   GG ++   FY L     A
Sbjct: 67  SFSLAGCTLYTSCEPCPMCLATALWARLDRVVYAADRDDAAKGGFDD-RAFYDLFGTGRA 125

Query: 121 TCHHS----------PEIYPGISEQRSRQIIQDF 144
             HH           PE Y       ++Q   D+
Sbjct: 126 NEHHDWPTKVDELRIPEAYDPFDAWLAKQDRTDY 159


>gi|282878399|ref|ZP_06287187.1| guanine deaminase [Prevotella buccalis ATCC 35310]
 gi|281299477|gb|EFA91858.1| guanine deaminase [Prevotella buccalis ATCC 35310]
          Length = 155

 Score = 61.6 bits (148), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 37/99 (37%), Positives = 51/99 (51%), Gaps = 4/99 (4%)

Query: 25  PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84
           P GAV   + +II+ A N      D TAHAE+ AIR     L    L   D+Y + EPC 
Sbjct: 24  PFGAVIAKDGEIIAEASNTVTLDHDPTAHAEVNAIRQAAHKLGTFDLTGCDIYTSCEPCP 83

Query: 85  MCAAAISLARIRRLYYGASNPKGG---GIENGTQFYTLA 120
           MC  AI  A + R+YY A+N K     G ++   ++ +A
Sbjct: 84  MCLGAIYWAHLDRIYY-ANNRKDAARIGFDDDFIYHEIA 121


>gi|227509717|ref|ZP_03939766.1| guanine deaminase [Lactobacillus brevis subsp. gravesensis ATCC
           27305]
 gi|227190641|gb|EEI70708.1| guanine deaminase [Lactobacillus brevis subsp. gravesensis ATCC
           27305]
          Length = 160

 Score = 61.6 bits (148), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 40/97 (41%), Positives = 51/97 (52%), Gaps = 3/97 (3%)

Query: 7   FMSCALEEAQNAALR--NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           FMS A +EA+N  LR  +  P GAV      I+  A N+  + +D TAHAEI AIR   +
Sbjct: 9   FMSLAAKEAENN-LRTGDGGPFGAVIANGQDILVTAHNQVLKDQDPTAHAEITAIRKATK 67

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
            L    L    LY +  PC MC  AI  + I+  YYG
Sbjct: 68  KLGSYDLSGYTLYTSCYPCPMCLGAIIWSNIKVAYYG 104


>gi|225555098|gb|EEH03391.1| tRNA specific adenosine deaminase [Ajellomyces capsulatus G186AR]
          Length = 234

 Score = 61.6 bits (148), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 33/80 (41%), Positives = 43/80 (53%), Gaps = 6/80 (7%)

Query: 51  TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI 110
           T HAE LAI    R   + I  E DLYVT+EPC MCA+A+   +IR +Y+G +N + GG 
Sbjct: 101 TRHAEFLAIEEVLRNYPRSIFRETDLYVTVEPCIMCASALRQYQIRHVYFGCANERFGGT 160

Query: 111 ENGTQFYTLATCHHSPEIYP 130
                   +   H  P I P
Sbjct: 161 GG------VLNLHSDPGIDP 174


>gi|148379269|ref|YP_001253810.1| guanine deaminase [Clostridium botulinum A str. ATCC 3502]
 gi|153931455|ref|YP_001383643.1| guanine deaminase [Clostridium botulinum A str. ATCC 19397]
 gi|153935940|ref|YP_001387192.1| guanine deaminase [Clostridium botulinum A str. Hall]
 gi|148288753|emb|CAL82837.1| guanine deaminase [Clostridium botulinum A str. ATCC 3502]
 gi|152927499|gb|ABS32999.1| guanine deaminase [Clostridium botulinum A str. ATCC 19397]
 gi|152931854|gb|ABS37353.1| guanine deaminase [Clostridium botulinum A str. Hall]
          Length = 157

 Score = 61.6 bits (148), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 31/79 (39%), Positives = 44/79 (55%)

Query: 25  PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84
           P G+  V + ++I+ A N      D TAH E+  IR  C+ L+   L   +LY T EPC 
Sbjct: 25  PFGSAIVKDGEVIAVAHNTVIGDNDPTAHGEVNVIRKACKKLNTFDLSGCELYTTSEPCP 84

Query: 85  MCAAAISLARIRRLYYGAS 103
           MC +AI  A I ++YYG +
Sbjct: 85  MCMSAIIWANISKVYYGCT 103


>gi|94496883|ref|ZP_01303457.1| Putative cytosine/adenosine deaminase [Sphingomonas sp. SKA58]
 gi|94423559|gb|EAT08586.1| Putative cytosine/adenosine deaminase [Sphingomonas sp. SKA58]
          Length = 175

 Score = 61.6 bits (148), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 29/81 (35%), Positives = 44/81 (54%)

Query: 22  NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81
            + P+ A+ VL+  ++++  N   E  D TAHAE++A R   ++     L    LY TL+
Sbjct: 36  QDTPIAAIIVLDGAVLAQGVNETDERCDATAHAEMMAFRAAGQVHGDMDLRGATLYSTLQ 95

Query: 82  PCTMCAAAISLARIRRLYYGA 102
           PC MC  A    +I R+ YGA
Sbjct: 96  PCGMCTMASIWTKIGRIVYGA 116


>gi|225874834|ref|YP_002756293.1| guanine deaminase [Acidobacterium capsulatum ATCC 51196]
 gi|225793201|gb|ACO33291.1| guanine deaminase [Acidobacterium capsulatum ATCC 51196]
          Length = 162

 Score = 61.6 bits (148), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 32/76 (42%), Positives = 42/76 (55%)

Query: 25  PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84
           P GAV V  +K+++ A N      D TAHAE+ AIR  CR L    L    +Y + EPC 
Sbjct: 31  PFGAVIVREDKVVAEAANSVFTTNDPTAHAEVNAIRAACRNLGVFELRGCVIYTSSEPCP 90

Query: 85  MCAAAISLARIRRLYY 100
           MC AA   A + R+Y+
Sbjct: 91  MCLAACYWAHLDRIYF 106


>gi|283779562|ref|YP_003370317.1| CMP/dCMP deaminase zinc-binding protein [Pirellula staleyi DSM
           6068]
 gi|283438015|gb|ADB16457.1| CMP/dCMP deaminase zinc-binding protein [Pirellula staleyi DSM
           6068]
          Length = 160

 Score = 61.6 bits (148), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 36/95 (37%), Positives = 50/95 (52%), Gaps = 1/95 (1%)

Query: 7   FMSCALEEA-QNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           F+  A+E A +N       P G+V V   KII R  NR     D +AHAEI+AIR  C+ 
Sbjct: 10  FLEAAIELARENVRSGKGGPFGSVVVKEGKIIGRGENRVTSSLDPSAHAEIVAIRDACQQ 69

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
                L    +Y + +PC MC +AI  +RI R+ +
Sbjct: 70  QQNFSLAGTTIYASCQPCPMCLSAIYWSRIDRVVF 104


>gi|75911133|ref|YP_325429.1| cytidine/deoxycytidylate deaminase [Anabaena variabilis ATCC 29413]
 gi|75704858|gb|ABA24534.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [Anabaena
           variabilis ATCC 29413]
          Length = 143

 Score = 61.6 bits (148), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 35/97 (36%), Positives = 50/97 (51%), Gaps = 3/97 (3%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  A++EA        IP+G+V V + KI+ R  N+  + +D   HAEI  +R   RI 
Sbjct: 4   FMQVAIQEATQGRQEGGIPIGSVLVKDGKILGRGHNKRVQDRDPVTHAEIDCLRNAGRIG 63

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
           S        LY TL PC +CA A+    I+++  G S
Sbjct: 64  SYR---GTTLYSTLMPCYLCAGAVVQFGIKKVIVGES 97


>gi|224025654|ref|ZP_03644020.1| hypothetical protein BACCOPRO_02394 [Bacteroides coprophilus DSM
           18228]
 gi|224018890|gb|EEF76888.1| hypothetical protein BACCOPRO_02394 [Bacteroides coprophilus DSM
           18228]
          Length = 155

 Score = 61.2 bits (147), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 31/77 (40%), Positives = 42/77 (54%)

Query: 25  PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84
           P GAV   N +I++   NR     D TAHAE+ AIR   ++L    L   ++Y + EPC 
Sbjct: 24  PFGAVIARNGEIVATGVNRVTPDCDPTAHAEVSAIRAAAKVLGTFDLSGCEIYTSCEPCP 83

Query: 85  MCAAAISLARIRRLYYG 101
           MC  AI  A +  +YYG
Sbjct: 84  MCLGAIYWAHLDCMYYG 100


>gi|153941176|ref|YP_001390638.1| guanine deaminase [Clostridium botulinum F str. Langeland]
 gi|152937072|gb|ABS42570.1| guanine deaminase [Clostridium botulinum F str. Langeland]
 gi|295318715|gb|ADF99092.1| guanine deaminase [Clostridium botulinum F str. 230613]
          Length = 157

 Score = 61.2 bits (147), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 31/79 (39%), Positives = 44/79 (55%)

Query: 25  PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84
           P G+  V + ++I+ A N      D TAH E+  IR  C+ L+   L   +LY T EPC 
Sbjct: 25  PFGSAIVKDGEMIAVAHNTVVGDNDPTAHGEVNVIRKACKKLNTFDLSGCELYTTSEPCP 84

Query: 85  MCAAAISLARIRRLYYGAS 103
           MC +AI  A I ++YYG +
Sbjct: 85  MCMSAIIWANISKVYYGCT 103


>gi|34557713|ref|NP_907528.1| cytosine deaminase [Wolinella succinogenes DSM 1740]
 gi|34483430|emb|CAE10428.1| CYTOSINE DEAMINASE [Wolinella succinogenes]
          Length = 145

 Score = 61.2 bits (147), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 36/95 (37%), Positives = 49/95 (51%), Gaps = 1/95 (1%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           F+  ALEEAQ       IP+G+V V++ KI+ R  N+  +      HAE+  +    R L
Sbjct: 4   FLEAALEEAQKGLDEGGIPIGSVLVIDGKIVGRGHNQRVQKGSSILHAEMDCLENAGR-L 62

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
           S     +  LY TL PC MC+ AI L  I +L  G
Sbjct: 63  SASDYRKATLYSTLSPCDMCSGAILLYGIPKLVIG 97


>gi|198276275|ref|ZP_03208806.1| hypothetical protein BACPLE_02467 [Bacteroides plebeius DSM 17135]
 gi|198270717|gb|EDY94987.1| hypothetical protein BACPLE_02467 [Bacteroides plebeius DSM 17135]
          Length = 155

 Score = 61.2 bits (147), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 31/77 (40%), Positives = 42/77 (54%)

Query: 25  PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84
           P GAV   + +I++   NR     D TAHAE+ AIR   + L    L   ++Y + EPC 
Sbjct: 24  PFGAVIAKDGEIVATGVNRVTPDCDPTAHAEVSAIRAAAKKLGTFDLSGCEIYTSCEPCP 83

Query: 85  MCAAAISLARIRRLYYG 101
           MC  AI  A + R+YYG
Sbjct: 84  MCLGAIYWAHLDRMYYG 100


>gi|149248448|ref|XP_001528611.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
           YB-4239]
 gi|146448565|gb|EDK42953.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
           YB-4239]
          Length = 271

 Score = 61.2 bits (147), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 42/140 (30%), Positives = 64/140 (45%), Gaps = 4/140 (2%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM+ AL     A L+NE PV  V     +IIS   N      + T HAE +A+    R+ 
Sbjct: 11  FMAVALFVGYKALLKNETPVACVVTRGCQIISIGYNHTNITLNGTKHAEFIALG---RLK 67

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
                  + LYVT+EPC MCA+ +    ++ + YG  N + GG       +      H P
Sbjct: 68  EPVDYKNLTLYVTVEPCIMCASYLRQLGLKNVIYGCGNDRFGGAGTILPLHNDPKLPHKP 127

Query: 127 -EIYPGISEQRSRQIIQDFF 145
                GI    + Q++++F+
Sbjct: 128 LTCIDGICRTEAIQLLRNFY 147


>gi|227541098|ref|ZP_03971147.1| tRNA-specific adenosine deaminase [Corynebacterium glucuronolyticum
           ATCC 51866]
 gi|227183114|gb|EEI64086.1| tRNA-specific adenosine deaminase [Corynebacterium glucuronolyticum
           ATCC 51866]
          Length = 161

 Score = 61.2 bits (147), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 45/130 (34%), Positives = 63/130 (48%), Gaps = 3/130 (2%)

Query: 22  NEIPVGAVAVLN--NKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVT 79
            ++PV A AV +    +I    N  +   D TAHAE+ AIRM  R     IL   +L VT
Sbjct: 27  TDVPVAA-AVFDAEGTMIGWGTNERKATSDPTAHAEVQAIRMAARARRDYILENTELVVT 85

Query: 80  LEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139
           LEPCTMCA A   ARI  L +GA   K G + +           +  E+  G+       
Sbjct: 86  LEPCTMCAGAFLAARIPSLVFGAFEEKTGAVGSVIDVVREPALPNRVEVVGGVLADECAA 145

Query: 140 IIQDFFKERR 149
            ++ FF+++R
Sbjct: 146 PLRAFFRDKR 155


>gi|332977120|gb|EGK13924.1| guanine deaminase [Desmospora sp. 8437]
          Length = 153

 Score = 61.2 bits (147), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 36/95 (37%), Positives = 51/95 (53%), Gaps = 1/95 (1%)

Query: 5  NVFMSCALEEA-QNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
          N +M  A+E A +N       P GA+ V + KI+ +  N+     D T HAE+ AIR   
Sbjct: 4  NHWMQTAIELAYENTRREKGRPFGAIIVKDGKIVGKGVNQILATHDPTMHAELEAIREAS 63

Query: 64 RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98
          R L+   L + +LY + +PC MC AAI  A I R+
Sbjct: 64 RTLATSDLSDCELYASGKPCPMCLAAIYWANIHRV 98


>gi|150004479|ref|YP_001299223.1| cytidine/deoxycytidylate deaminase [Bacteroides vulgatus ATCC 8482]
 gi|254882789|ref|ZP_05255499.1| cytidine/deoxycytidylate deaminase [Bacteroides sp. 4_3_47FAA]
 gi|294778238|ref|ZP_06743664.1| guanine deaminase [Bacteroides vulgatus PC510]
 gi|319643895|ref|ZP_07998478.1| cytidine/deoxycytidylate deaminase [Bacteroides sp. 3_1_40A]
 gi|149932903|gb|ABR39601.1| cytidine/deoxycytidylate deaminase [Bacteroides vulgatus ATCC 8482]
 gi|254835582|gb|EET15891.1| cytidine/deoxycytidylate deaminase [Bacteroides sp. 4_3_47FAA]
 gi|294447866|gb|EFG16440.1| guanine deaminase [Bacteroides vulgatus PC510]
 gi|317384512|gb|EFV65478.1| cytidine/deoxycytidylate deaminase [Bacteroides sp. 3_1_40A]
          Length = 155

 Score = 61.2 bits (147), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 31/77 (40%), Positives = 41/77 (53%)

Query: 25  PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84
           P GAV   + +II+   NR     D TAHAE+ AIR     L    L   ++Y + EPC 
Sbjct: 24  PFGAVIAKDGEIIATGANRVTSQCDPTAHAEVSAIRAAASKLGTFNLSGCEIYTSCEPCP 83

Query: 85  MCAAAISLARIRRLYYG 101
           MC  AI  AR+ ++YY 
Sbjct: 84  MCLGAIYWARLDKMYYA 100


>gi|322830058|gb|EFZ33221.1| deaminase, putative [Trypanosoma cruzi]
          Length = 333

 Score = 61.2 bits (147), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 49/158 (31%), Positives = 73/158 (46%), Gaps = 17/158 (10%)

Query: 4   GNVFMSCALEEAQ-----NAA-LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57
           G V + C L  A+     NA  L +  P  + A L N I +R  N   +     AHAE +
Sbjct: 162 GEVPVGCVLVPAEASCPANAGRLDDNNPNNSGASLGNLIAARGRNATNKEHHALAHAEFV 221

Query: 58  AIRMGCRILSQE------ILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIE 111
           A+    R  +++       L    LYV +EPC MCAA +   RI+++Y+G  NP+ GG  
Sbjct: 222 AVEALLRDAAEKGRKPPASLAGYVLYVVVEPCIMCAAMLLYNRIKKVYFGCGNPRFGG-- 279

Query: 112 NGTQFYTLATCHHSPEIYPGISEQRSRQ---IIQDFFK 146
           NGT     A    S   Y      R+ +   ++Q+F+ 
Sbjct: 280 NGTVLAVHAAKSTSAPAYESCGGHRAEEAITLLQEFYS 317


>gi|153008613|ref|YP_001369828.1| zinc-binding CMP/dCMP deaminase [Ochrobactrum anthropi ATCC 49188]
 gi|151560501|gb|ABS13999.1| CMP/dCMP deaminase zinc-binding [Ochrobactrum anthropi ATCC 49188]
          Length = 156

 Score = 61.2 bits (147), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 31/80 (38%), Positives = 46/80 (57%)

Query: 25  PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84
           P GAV V   K+I+   NR +   D TAHAE+LA+R   + L    L   ++Y + +PC 
Sbjct: 25  PFGAVVVKGGKVIATGVNRMQADCDPTAHAELLALRAAGKTLQSPRLDGCEVYASGQPCP 84

Query: 85  MCAAAISLARIRRLYYGASN 104
           MC AA+ +A I ++ +  SN
Sbjct: 85  MCFAAMRMAGIEKIRFAYSN 104


>gi|162452397|ref|YP_001614764.1| cytosine/adenosine deaminase [Sorangium cellulosum 'So ce 56']
 gi|161162979|emb|CAN94284.1| cytosine/adenosine deaminase [Sorangium cellulosum 'So ce 56']
          Length = 163

 Score = 61.2 bits (147), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 34/104 (32%), Positives = 52/104 (50%), Gaps = 4/104 (3%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELK----DVTAHAEILAIRMG 62
           FM  A++ + +A     +P GAV V   +++  + N+ R       D TAHAE++ IR  
Sbjct: 13  FMQLAVDASSDALRAGNMPFGAVLVQGGQVLQVSCNQRRTANAGEGDCTAHAEVMLIREA 72

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPK 106
                 E L    +Y + EPC MC+ A+  A + R+ Y AS P 
Sbjct: 73  TAAHGPEALAGGTVYASGEPCAMCSGALFWAGVSRIVYAASTPD 116


>gi|78777832|ref|YP_394147.1| cytosine deaminase [Sulfurimonas denitrificans DSM 1251]
 gi|78498372|gb|ABB44912.1| Cytosine deaminase [Sulfurimonas denitrificans DSM 1251]
          Length = 145

 Score = 61.2 bits (147), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 32/95 (33%), Positives = 51/95 (53%), Gaps = 1/95 (1%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           F+  A+EEA+       IP+G+V V++ KI+ R  NR  +      HAE+  +    R+ 
Sbjct: 4   FLQAAIEEAKKGLKEGGIPIGSVLVIDGKIVGRGHNRRVQDSSAILHAEMDCLENAGRMA 63

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
           + E    + LY TL PC+MC+ A  L +I ++  G
Sbjct: 64  ASEYKKAI-LYSTLSPCSMCSGAALLYKIPKIIIG 97


>gi|257080390|ref|ZP_05574751.1| conserved hypothetical protein [Enterococcus faecalis E1Sol]
 gi|256988420|gb|EEU75722.1| conserved hypothetical protein [Enterococcus faecalis E1Sol]
          Length = 158

 Score = 61.2 bits (147), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 41/152 (26%), Positives = 67/152 (44%), Gaps = 4/152 (2%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           K+   F+  A+  A+ +  +   P GA+ V +N I+    N+     D T HAE   IR 
Sbjct: 5   KQDERFIMQAISLAEASKNQGNEPFGAILVKDNTIVFTNENQIHIKSDPTFHAEHGLIRE 64

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI----ENGTQFY 117
            C+      L E  LY + EPC MC+ AI  +++ RL + A       I    E      
Sbjct: 65  FCQKYKITDLSEYTLYSSCEPCFMCSGAIVWSKLGRLVFSAYAKDLDSILGEKEESPCLL 124

Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
                   P++  G+   +  QI++D+F + +
Sbjct: 125 VFEHSVWKPQVSGGVLRDKGVQILKDYFSDHK 156


>gi|227487346|ref|ZP_03917662.1| tRNA-specific adenosine deaminase [Corynebacterium glucuronolyticum
           ATCC 51867]
 gi|227092570|gb|EEI27882.1| tRNA-specific adenosine deaminase [Corynebacterium glucuronolyticum
           ATCC 51867]
          Length = 161

 Score = 61.2 bits (147), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 45/130 (34%), Positives = 63/130 (48%), Gaps = 3/130 (2%)

Query: 22  NEIPVGAVAVLN--NKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVT 79
            ++PV A AV +    +I    N  +   D TAHAE+ AIRM  R     IL   +L VT
Sbjct: 27  TDVPVAA-AVFDAEGTMIGWGTNERKATSDPTAHAEVQAIRMAARARRDYILENTELVVT 85

Query: 80  LEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139
           LEPCTMCA A   ARI  L +GA   K G + +           +  E+  G+       
Sbjct: 86  LEPCTMCAGAFLAARIPSLVFGAFEEKTGAVGSVIDVVREPALPNRVEVVGGVLADDCAA 145

Query: 140 IIQDFFKERR 149
            ++ FF+++R
Sbjct: 146 PLRAFFRDKR 155


>gi|282891755|ref|ZP_06300236.1| hypothetical protein pah_c197o065 [Parachlamydia acanthamoebae str.
           Hall's coccus]
 gi|281498339|gb|EFB40677.1| hypothetical protein pah_c197o065 [Parachlamydia acanthamoebae str.
           Hall's coccus]
          Length = 161

 Score = 60.8 bits (146), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 36/100 (36%), Positives = 53/100 (53%), Gaps = 2/100 (2%)

Query: 7   FMSCALEEAQNAALRNEIP--VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           FM  A+  ++ A++  +     GAV V + KII+   N+  +  D T HAE+ AIR  C+
Sbjct: 9   FMKRAIALSRKASIEEKTGGVFGAVIVKDGKIIAEGYNQVLKHNDPTWHAEMHAIREACK 68

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASN 104
            L +  L   DLY + E C MC +A   A I  +YY A+ 
Sbjct: 69  KLGKPHLEGCDLYTSAECCPMCLSAAYWAHIDHIYYAATT 108


>gi|149392256|gb|ABR25967.1| cytidine/deoxycytidylate deaminase family protein [Oryza sativa
           Indica Group]
 gi|215713595|dbj|BAG94732.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 116

 Score = 60.8 bits (146), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 27/54 (50%), Positives = 37/54 (68%)

Query: 49  DVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGA 102
           D TAHAE+ AIR  C+ L +  L + ++Y + EPC MC  A+ L+RI+RL YGA
Sbjct: 7   DPTAHAEVTAIREACKKLGKIELSDCEIYASCEPCPMCFGAVHLSRIKRLVYGA 60


>gi|53712925|ref|YP_098917.1| cytidine/deoxycytidylate deaminase [Bacteroides fragilis YCH46]
 gi|60681139|ref|YP_211283.1| putative nucleotide deaminase [Bacteroides fragilis NCTC 9343]
 gi|253563096|ref|ZP_04840553.1| cytidine/deoxycytidylate deaminase [Bacteroides sp. 3_2_5]
 gi|265763023|ref|ZP_06091591.1| cytidine/deoxycytidylate deaminase [Bacteroides sp. 2_1_16]
 gi|52215790|dbj|BAD48383.1| cytidine/deoxycytidylate deaminase [Bacteroides fragilis YCH46]
 gi|60492573|emb|CAH07345.1| putative nucleotide deaminase [Bacteroides fragilis NCTC 9343]
 gi|251946872|gb|EES87154.1| cytidine/deoxycytidylate deaminase [Bacteroides sp. 3_2_5]
 gi|263255631|gb|EEZ26977.1| cytidine/deoxycytidylate deaminase [Bacteroides sp. 2_1_16]
 gi|301162628|emb|CBW22175.1| putative nucleotide deaminase [Bacteroides fragilis 638R]
          Length = 155

 Score = 60.8 bits (146), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 31/77 (40%), Positives = 42/77 (54%)

Query: 25  PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84
           P GAV   + +I++   NR     D TAHAE+ AIR     L    L   ++Y + EPC 
Sbjct: 24  PFGAVIAKDGEIVATGVNRVTASCDPTAHAEVSAIRAAASKLGTFNLSGYEIYTSCEPCP 83

Query: 85  MCAAAISLARIRRLYYG 101
           MC  AI  AR+ ++YYG
Sbjct: 84  MCLGAIYWARLDKMYYG 100


>gi|319956637|ref|YP_004167900.1| cmp/dcmp deaminase zinc-binding protein [Nitratifractor salsuginis
           DSM 16511]
 gi|319419041|gb|ADV46151.1| CMP/dCMP deaminase zinc-binding protein [Nitratifractor salsuginis
           DSM 16511]
          Length = 155

 Score = 60.8 bits (146), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 38/94 (40%), Positives = 47/94 (50%)

Query: 25  PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84
           P GAV V   +I+S A N      D TAHAEILAIR+    L +  L    LY T EPC 
Sbjct: 25  PFGAVIVYRGEIVSTAHNEVVLRNDPTAHAEILAIRLAGEKLQRFHLNGCTLYCTGEPCP 84

Query: 85  MCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
           MC +AI  A + R+ Y  +  +   I     F T
Sbjct: 85  MCFSAIHWAHLDRVIYCNTKEEAAKIGFDDTFIT 118


>gi|239996129|ref|ZP_04716653.1| cytidine/deoxycytidylate deaminase family protein [Alteromonas
           macleodii ATCC 27126]
          Length = 109

 Score = 60.8 bits (146), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 27/79 (34%), Positives = 42/79 (53%)

Query: 71  LPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYP 130
           L +  LYVTLEPC+MCA  +  AR++R+ +GA + K G   +          +H  E+  
Sbjct: 12  LIDATLYVTLEPCSMCAGMLVHARVKRVVFGAKDAKTGAAGSVMNLLQHPALNHQLEVVS 71

Query: 131 GISEQRSRQIIQDFFKERR 149
           G+        + DFF++RR
Sbjct: 72  GVLADECANKLSDFFRKRR 90


>gi|157073959|ref|NP_001096831.1| tRNA-specific adenosine deaminase-like protein 3 [Rattus
           norvegicus]
 gi|81882326|sp|Q561R2|ADAT3_RAT RecName: Full=tRNA-specific adenosine deaminase-like protein 3;
           AltName: Full=tRNA-specific adenosine-34 deaminase
           subunit ADAT3
 gi|62531223|gb|AAH93394.1| Adat3 protein [Rattus norvegicus]
 gi|149034525|gb|EDL89262.1| secretory carrier membrane protein 4, isoform CRA_e [Rattus
           norvegicus]
          Length = 349

 Score = 60.8 bits (146), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 36/86 (41%), Positives = 51/86 (59%), Gaps = 9/86 (10%)

Query: 64  RILSQEILPEV----DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF--Y 117
           R L ++ LP V    DLYVT EPC MCA A+  ARI+R++YGA +P G     GT+F  +
Sbjct: 266 RKLDEDSLPYVCTGYDLYVTREPCVMCAMALVHARIQRVFYGAPSPDGA---LGTRFRVH 322

Query: 118 TLATCHHSPEIYPGISEQRSRQIIQD 143
                +H  +++ GI E + RQ+  D
Sbjct: 323 ARPDLNHRFQVFRGILEDQCRQLDPD 348


>gi|51245328|ref|YP_065212.1| cytidine and deoxycytidylate deaminase family protein [Desulfotalea
           psychrophila LSv54]
 gi|50876365|emb|CAG36205.1| related to cytidine and deoxycytidylate deaminase family protein
           [Desulfotalea psychrophila LSv54]
          Length = 169

 Score = 60.8 bits (146), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 42/148 (28%), Positives = 67/148 (45%), Gaps = 4/148 (2%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M     FM  AL +A+ A +  E PVG V V   ++++    RN    +   HAE+ A+R
Sbjct: 1   MDVDESFMEVALAQAERALVAGEFPVGCVIVSQGEVVAVGERRNSVSANELDHAEMNALR 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
                     + ++ +Y T+EPC MC +A+ +  +R + Y   +  GGG         LA
Sbjct: 61  TLLAQGQPADMEKLVVYSTMEPCLMCYSALIVNGVRNIVYAYEDAMGGG--TSLPLSQLA 118

Query: 121 TCHHS--PEIYPGISEQRSRQIIQDFFK 146
             +      I P +   RS ++ Q FF 
Sbjct: 119 PLYAGIRMNIRPHVLRARSLRLFQQFFS 146


>gi|167846243|ref|ZP_02471751.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia
           pseudomallei B7210]
          Length = 141

 Score = 60.8 bits (146), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 36/79 (45%), Positives = 49/79 (62%)

Query: 22  NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81
            E+PVGAV V  +++I+R  N      D +AHAE+ A+R   R L    +P  +LYVTLE
Sbjct: 63  GEVPVGAVIVRGDEVIARGFNHPIGGHDPSAHAEMAALRAAARALRNYRMPGCELYVTLE 122

Query: 82  PCTMCAAAISLARIRRLYY 100
           PC MC+ AI  ARI R+ +
Sbjct: 123 PCLMCSGAIMHARIARVVF 141


>gi|325270746|ref|ZP_08137337.1| guanine deaminase [Prevotella multiformis DSM 16608]
 gi|324986862|gb|EGC18854.1| guanine deaminase [Prevotella multiformis DSM 16608]
          Length = 155

 Score = 60.8 bits (146), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 32/92 (34%), Positives = 41/92 (44%)

Query: 25  PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84
           P GAV   N +II+   N      D TAHAE+  IR  C  L    L   ++Y + EPC 
Sbjct: 24  PFGAVIARNGEIIAEGSNGVTIYNDPTAHAEVSVIRKACHQLHTFDLTGCEIYTSCEPCP 83

Query: 85  MCAAAISLARIRRLYYGASNPKGGGIENGTQF 116
           MC  AI  A + ++YY         I     F
Sbjct: 84  MCLGAIYWAHLDKIYYANDRKDAAAIGFDDDF 115


>gi|303390913|ref|XP_003073687.1| deoxycytidylate deaminase [Encephalitozoon intestinalis ATCC 50506]
 gi|303302834|gb|ADM12327.1| deoxycytidylate deaminase [Encephalitozoon intestinalis ATCC 50506]
          Length = 149

 Score = 60.8 bits (146), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 50/100 (50%), Gaps = 7/100 (7%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           + FM  AL++A+ A  + E+PVG V V +  ++S++ N     K    HAE+++IR    
Sbjct: 9   SFFMDMALDQAEKAFDQLEVPVGCVVVRDGIVVSKSHNMTNANKSPLDHAEVISIR---- 64

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASN 104
                       YVT EPC MC   +   +  R+YYG  N
Sbjct: 65  ---STDCSNSTFYVTCEPCIMCMGILGRLKGVRVYYGCKN 101


>gi|118580396|ref|YP_901646.1| cytosine deaminase [Pelobacter propionicus DSM 2379]
 gi|118503106|gb|ABK99588.1| Cytosine deaminase [Pelobacter propionicus DSM 2379]
          Length = 145

 Score = 60.8 bits (146), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 37/95 (38%), Positives = 48/95 (50%), Gaps = 1/95 (1%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  ALEEA+       IP+G++ V    ++ R  NR  +   V  HAE+ A+    R +
Sbjct: 4   FMQAALEEARKGLAEGGIPIGSLVVHRGAVLGRGHNRRVQKGSVILHAEMDALENAGR-M 62

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
              I  E  LY TL PC MCA AI L  I R+  G
Sbjct: 63  PAAIYRESVLYTTLSPCPMCAGAILLYGIPRVVIG 97


>gi|296118010|ref|ZP_06836592.1| tRNA-specific adenosine deaminase [Corynebacterium ammoniagenes DSM
           20306]
 gi|295968896|gb|EFG82139.1| tRNA-specific adenosine deaminase [Corynebacterium ammoniagenes DSM
           20306]
          Length = 151

 Score = 60.8 bits (146), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 44/130 (33%), Positives = 63/130 (48%), Gaps = 2/130 (1%)

Query: 22  NEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEI-LPEVDLYVT 79
            ++PVGAV    +   ++   NR   L D TAHAE+ AIR   R       L   +L VT
Sbjct: 17  GDVPVGAVIYGPDGAELATGVNRREALADPTAHAEVEAIRAAVREYGDSWRLEGCELVVT 76

Query: 80  LEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139
           LEPC MCA A   AR+  + +GA  PK G   +             PE+  G+ E   ++
Sbjct: 77  LEPCAMCAGAAQAARVSSVVFGAWEPKTGACGSLVDVLRAPGALFVPEVRAGVLEAECQE 136

Query: 140 IIQDFFKERR 149
           +++ FF+  R
Sbjct: 137 VLRKFFENLR 146


>gi|197117867|ref|YP_002138294.1| zinc-dependent cytosine deaminase [Geobacter bemidjiensis Bem]
 gi|197087227|gb|ACH38498.1| zinc-dependent cytosine deaminase [Geobacter bemidjiensis Bem]
          Length = 145

 Score = 60.5 bits (145), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 34/100 (34%), Positives = 53/100 (53%), Gaps = 1/100 (1%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           +++M  A+EEA+       IP+G+V V    I+ R  NR  +      H E+ A+    R
Sbjct: 2   DIYMQSAIEEAKKGLGEGGIPIGSVLVHKGLILGRGHNRRVQKGSSILHGEMDALENAGR 61

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASN 104
           + +Q +  E  LY TL PC+MC+ AI L  I R+  G ++
Sbjct: 62  LPAQ-VYRESVLYTTLSPCSMCSGAILLYGIPRVVIGENS 100


>gi|83775265|dbj|BAE65387.1| unnamed protein product [Aspergillus oryzae]
          Length = 145

 Score = 60.5 bits (145), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 30/95 (31%), Positives = 52/95 (54%)

Query: 51  TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI 110
           T HAE +A+    R   + +L    LYVT+EPC MCA+A+   RI+ +Y+G SN + GG 
Sbjct: 14  TRHAEFIALERMLRNYPKSLLRSTKLYVTVEPCVMCASALRQYRIQAVYFGCSNERFGGT 73

Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
            +    +T  +      +Y G+  + +  +++ F+
Sbjct: 74  GSILSLHTDFSIDPPYPVYGGLFSKEAVMLLRRFY 108


>gi|312378080|gb|EFR24748.1| hypothetical protein AND_10447 [Anopheles darlingi]
          Length = 186

 Score = 60.5 bits (145), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 44/154 (28%), Positives = 70/154 (45%), Gaps = 15/154 (9%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVL-----NNKIISRAGNRNRELKDVTAHAEILAI 59
           + FM  AL++A+ A    E+PVG V V      +  II+R  N   E K+ T H E + I
Sbjct: 2   DCFMEDALQQARLANDLKEVPVGCVFVYGPNEGDGVIIARGCNLVNETKNATRHVEFICI 61

Query: 60  RMGCRIL-------SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN 112
                          + I   + + VT+EPC MCAAA+    +R + YG  N + GG   
Sbjct: 62  DQALEYARAHGFEPPESIFTSISVVVTVEPCIMCAAALLNLGVREIVYGCRNDRFGG--- 118

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
            T          +  I  G+    + +++++F+K
Sbjct: 119 STVLDVARLLKSNIPIRGGVRGDEAMELLKEFYK 152


>gi|310777941|ref|YP_003966274.1| CMP/dCMP deaminase zinc-binding protein [Ilyobacter polytropus DSM
           2926]
 gi|309747264|gb|ADO81926.1| CMP/dCMP deaminase zinc-binding protein [Ilyobacter polytropus DSM
           2926]
          Length = 159

 Score = 60.5 bits (145), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 33/83 (39%), Positives = 42/83 (50%), Gaps = 1/83 (1%)

Query: 25  PVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83
           P GA+ V     I+  +GN     KD+T HAE    ++  +  S+E L E  LY T EPC
Sbjct: 24  PFGALLVDKEGNILIESGNIEVTEKDITGHAETTVAKLAGKKYSKEFLWETTLYTTAEPC 83

Query: 84  TMCAAAISLARIRRLYYGASNPK 106
            MC  AI  A I  + YG S  K
Sbjct: 84  CMCTGAIYWANIGNVVYGISEKK 106


>gi|307109298|gb|EFN57536.1| hypothetical protein CHLNCDRAFT_20896 [Chlorella variabilis]
          Length = 156

 Score = 60.5 bits (145), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 41/92 (44%), Positives = 52/92 (56%), Gaps = 3/92 (3%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNN-KIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           FM  ALE+A+ A    E+PVGAV V    ++++ A N      D TAHAE+L IR     
Sbjct: 11  FMRLALEQARLAFDDGEVPVGAVLVSGGGQVLAAARNAAEGAADPTAHAELLCIRQAATA 70

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRR 97
                L +  LYVTLEPC MCA A  L ++RR
Sbjct: 71  AGGWRLLDATLYVTLEPCPMCAGA--LLQVRR 100


>gi|296455801|gb|ADH22036.1| cytosine deaminase [synthetic Mycoplasma mycoides JCVI-syn1.0]
          Length = 155

 Score = 60.5 bits (145), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 39/114 (34%), Positives = 58/114 (50%), Gaps = 2/114 (1%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAI 59
           M   N  +   + +++ A   N+IPV    +  NN I+S + N   + K+++ HAEI AI
Sbjct: 9   MNDFNNILDLMIYQSKKAIKHNDIPVCCCIIDSNNNILSMSINTRYKNKNISQHAEINAI 68

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENG 113
                 L+   L E  L  TLEPC MC +AI   +I  +YY   + K  GI+N 
Sbjct: 69  NKLINKLNTFNLSEYKLITTLEPCMMCYSAIKQVKINTIYYLVDSYK-FGIQNN 121


>gi|226314093|ref|YP_002773989.1| hypothetical protein BBR47_45080 [Brevibacillus brevis NBRC 100599]
 gi|226097043|dbj|BAH45485.1| conserved hypothetical protein [Brevibacillus brevis NBRC 100599]
          Length = 150

 Score = 60.5 bits (145), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 30/76 (39%), Positives = 42/76 (55%)

Query: 25  PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84
           P GA  V  N+II+   NR     D + HAE++AIR  C+ L    L   ++Y T EPC 
Sbjct: 22  PFGAAVVKGNEIIAVCSNRMMADMDPSQHAEMVAIREACKALGTMDLAGCEIYATCEPCP 81

Query: 85  MCAAAISLARIRRLYY 100
           MC  AI  + I+ ++Y
Sbjct: 82  MCVGAIIWSGIKVVHY 97


>gi|163851859|ref|YP_001639902.1| CMP/dCMP deaminase zinc-binding [Methylobacterium extorquens PA1]
 gi|163663464|gb|ABY30831.1| CMP/dCMP deaminase zinc-binding [Methylobacterium extorquens PA1]
          Length = 301

 Score = 60.5 bits (145), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 44/122 (36%), Positives = 59/122 (48%), Gaps = 22/122 (18%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVL----NNKIISRAGNRNR--ELKDVTAHAEIL 57
           GN +M  A EEA+ +      P GAV +      N++I    N N   E +D TAHAE+ 
Sbjct: 125 GNQWMRMASEEARISVENGGGPFGAVILQIDDETNEVIRYWRNHNHVPEWRDPTAHAEVS 184

Query: 58  AIRMGCRILS----------QEILPE------VDLYVTLEPCTMCAAAISLARIRRLYYG 101
           AIR  CR L           +  LP+        +Y + EPC MC AAI  ARI +L + 
Sbjct: 185 AIRAACRELGVFSLASIKKEESKLPQKGATSHTVIYSSAEPCPMCYAAIYWARIPKLVFA 244

Query: 102 AS 103
           A+
Sbjct: 245 AT 246


>gi|255008429|ref|ZP_05280555.1| putative nucleotide deaminase [Bacteroides fragilis 3_1_12]
          Length = 149

 Score = 60.5 bits (145), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 31/77 (40%), Positives = 41/77 (53%)

Query: 25  PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84
           P GAV   + +I+    NR     D TAHAE+ AIR     L    L   ++Y + EPC 
Sbjct: 18  PFGAVIAKDGEIVVTGVNRVTASCDPTAHAEVTAIRAAASKLGTFNLSGYEIYTSCEPCP 77

Query: 85  MCAAAISLARIRRLYYG 101
           MC  AI  AR+ ++YYG
Sbjct: 78  MCLGAIYWARLDKMYYG 94


>gi|313146154|ref|ZP_07808347.1| cytidine/deoxycytidylate deaminase [Bacteroides fragilis 3_1_12]
 gi|313134921|gb|EFR52281.1| cytidine/deoxycytidylate deaminase [Bacteroides fragilis 3_1_12]
          Length = 155

 Score = 60.5 bits (145), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 31/77 (40%), Positives = 41/77 (53%)

Query: 25  PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84
           P GAV   + +I+    NR     D TAHAE+ AIR     L    L   ++Y + EPC 
Sbjct: 24  PFGAVIAKDGEIVVTGVNRVTASCDPTAHAEVTAIRAAASKLGTFNLSGYEIYTSCEPCP 83

Query: 85  MCAAAISLARIRRLYYG 101
           MC  AI  AR+ ++YYG
Sbjct: 84  MCLGAIYWARLDKMYYG 100


>gi|109900168|ref|YP_663423.1| cytosine deaminase [Pseudoalteromonas atlantica T6c]
 gi|109702449|gb|ABG42369.1| Cytosine deaminase [Pseudoalteromonas atlantica T6c]
          Length = 145

 Score = 60.5 bits (145), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 34/95 (35%), Positives = 50/95 (52%), Gaps = 1/95 (1%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  A++EA+       IP+G+V V NNKII R  N+  +      H E+ A+    R  
Sbjct: 4   FMQAAIDEAKLGLAEGGIPIGSVLVHNNKIIGRGHNKRVQSGSPILHGEMDALENAGRQP 63

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
           ++ +  E  LY TL PC+MC+  I L  I ++  G
Sbjct: 64  AR-VYKESTLYTTLSPCSMCSGTILLYGIPKVVIG 97


>gi|186686613|ref|YP_001869809.1| CMP/dCMP deaminase, zinc-binding [Nostoc punctiforme PCC 73102]
 gi|186469065|gb|ACC84866.1| CMP/dCMP deaminase, zinc-binding [Nostoc punctiforme PCC 73102]
          Length = 143

 Score = 60.5 bits (145), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 34/97 (35%), Positives = 50/97 (51%), Gaps = 3/97 (3%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  A++EA+       IP+G+V V + KI+ R  N+  +  D   HAEI  +R   R+ 
Sbjct: 4   FMEAAIQEAKQGREEGGIPIGSVLVKDGKILGRGHNKRVQDGDPVTHAEIDCLRNAGRVG 63

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
           S        LY TL PC +CA A+    I+++  G S
Sbjct: 64  SYR---GTTLYSTLMPCYLCAGAVVQFGIKKVIVGES 97


>gi|168178781|ref|ZP_02613445.1| guanine deaminase [Clostridium botulinum NCTC 2916]
 gi|182671437|gb|EDT83411.1| guanine deaminase [Clostridium botulinum NCTC 2916]
          Length = 157

 Score = 60.5 bits (145), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 31/79 (39%), Positives = 43/79 (54%)

Query: 25  PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84
           P G+  V   ++I+ A N      D TAH E+  IR  C+ L+   L   +LY T EPC 
Sbjct: 25  PFGSAIVKAGQVIAVAHNTVVGDNDPTAHGEVNVIRKACKKLNTFDLSGCELYTTSEPCP 84

Query: 85  MCAAAISLARIRRLYYGAS 103
           MC +AI  A I ++YYG +
Sbjct: 85  MCMSAIIWANISKVYYGCT 103


>gi|311277409|ref|YP_003939640.1| CMP/dCMP deaminase zinc-binding protein [Enterobacter cloacae SCF1]
 gi|308746604|gb|ADO46356.1| CMP/dCMP deaminase zinc-binding protein [Enterobacter cloacae SCF1]
          Length = 151

 Score = 60.1 bits (144), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 31/93 (33%), Positives = 49/93 (52%), Gaps = 2/93 (2%)

Query: 14  EAQNAALRNEI--PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEIL 71
           +A    + N I  P GA  V N +++    N      D +AHAE++AIR  C+      L
Sbjct: 9   DATIHGMENNIGGPFGATIVRNGEVVVAISNTMTRDTDPSAHAELVAIREACKKRGTFDL 68

Query: 72  PEVDLYVTLEPCTMCAAAISLARIRRLYYGASN 104
            + ++Y T EPC MC A I    I+++YY +++
Sbjct: 69  SDCEIYATCEPCPMCVAVIIWTGIKKVYYCSTH 101


>gi|256383711|gb|ACU78281.1| cytosine deaminase [Mycoplasma mycoides subsp. capri str. GM12]
 gi|256384542|gb|ACU79111.1| cytosine deaminase [Mycoplasma mycoides subsp. capri str. GM12]
          Length = 147

 Score = 60.1 bits (144), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 39/114 (34%), Positives = 58/114 (50%), Gaps = 2/114 (1%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAI 59
           M   N  +   + +++ A   N+IPV    +  NN I+S + N   + K+++ HAEI AI
Sbjct: 1   MNDFNNILDLMIYQSKKAIKHNDIPVCCCIIDSNNNILSMSINTRYKNKNISQHAEINAI 60

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENG 113
                 L+   L E  L  TLEPC MC +AI   +I  +YY   + K  GI+N 
Sbjct: 61  NKLINKLNTFNLSEYKLITTLEPCMMCYSAIKQVKINTIYYLVDSYK-FGIQNN 113


>gi|68466625|ref|XP_722508.1| potential tRNA wobble position adenosine deaminase subunit [Candida
           albicans SC5314]
 gi|68466908|ref|XP_722369.1| potential tRNA wobble position adenosine deaminase subunit [Candida
           albicans SC5314]
 gi|46444339|gb|EAL03614.1| potential tRNA wobble position adenosine deaminase subunit [Candida
           albicans SC5314]
 gi|46444487|gb|EAL03761.1| potential tRNA wobble position adenosine deaminase subunit [Candida
           albicans SC5314]
          Length = 281

 Score = 60.1 bits (144), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 38/110 (34%), Positives = 58/110 (52%), Gaps = 4/110 (3%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           +M+ +L     A L NE PV  + V   ++KIIS   N      + T HAE +A++    
Sbjct: 11  YMAISLFVGYKALLNNETPVSCIVVDSKSDKIISIGYNYTNHSLNGTQHAEFIALQRFGE 70

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGT 114
             S     ++ LYVT+EPC MCA+ +    I+++ +G  N + GG  NGT
Sbjct: 71  QKSSIDYNDLILYVTVEPCIMCASYLRQLGIKKVIFGCGNDRFGG--NGT 118


>gi|194334351|ref|YP_002016211.1| CMP/dCMP deaminase [Prosthecochloris aestuarii DSM 271]
 gi|194312169|gb|ACF46564.1| CMP/dCMP deaminase zinc-binding [Prosthecochloris aestuarii DSM
           271]
          Length = 155

 Score = 60.1 bits (144), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 31/80 (38%), Positives = 44/80 (55%)

Query: 25  PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84
           P GA+ V N ++++   NR     D T+HAE+ AIR   + L    L   +LY + EPC 
Sbjct: 24  PFGALIVRNGEVVATGVNRVTRENDPTSHAEVNAIRAASQKLKTFKLEGCELYSSCEPCP 83

Query: 85  MCAAAISLARIRRLYYGASN 104
           MC  AI  A +  +YYGA +
Sbjct: 84  MCMGAIYWAGVTTVYYGADS 103


>gi|304383618|ref|ZP_07366077.1| guanine deaminase [Prevotella marshii DSM 16973]
 gi|304335142|gb|EFM01413.1| guanine deaminase [Prevotella marshii DSM 16973]
          Length = 155

 Score = 60.1 bits (144), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 33/95 (34%), Positives = 44/95 (46%)

Query: 25  PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84
           P GAV   + +II+   N   +  D TAHAE+ AIR   R L    L   ++Y + EPC 
Sbjct: 24  PFGAVIAKDGEIIAEGANSVTKDHDPTAHAEVNAIRKASRKLGTFDLSGCEIYTSCEPCP 83

Query: 85  MCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
           MC  AI  A + ++YY         I     F  L
Sbjct: 84  MCLGAIYWAHLDKIYYANDRKDAARIGFDDDFIYL 118


>gi|261879068|ref|ZP_06005495.1| guanine deaminase [Prevotella bergensis DSM 17361]
 gi|270334349|gb|EFA45135.1| guanine deaminase [Prevotella bergensis DSM 17361]
          Length = 155

 Score = 60.1 bits (144), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 34/85 (40%), Positives = 45/85 (52%), Gaps = 1/85 (1%)

Query: 25  PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84
           P GAV   N  +++ A N      D TAHAE+ AIR+ C  L    L   ++Y + EPC 
Sbjct: 24  PFGAVIARNGVVLAEASNSVTIDHDPTAHAEVNAIRVACDRLHTFDLSGCEIYCSCEPCP 83

Query: 85  MCAAAISLARIRRLYYGASNPKGGG 109
           MC  AI  AR+  +YY A+N K   
Sbjct: 84  MCLGAIYWARLDHIYY-ANNRKAAA 107


>gi|239832713|ref|ZP_04681042.1| CMP/dCMP deaminase zinc-binding [Ochrobactrum intermedium LMG 3301]
 gi|239824980|gb|EEQ96548.1| CMP/dCMP deaminase zinc-binding [Ochrobactrum intermedium LMG 3301]
          Length = 156

 Score = 60.1 bits (144), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 33/104 (31%), Positives = 55/104 (52%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M     F+  A++ A +   +   P GAV V   ++I+   NR +   D TAHAE+LA+R
Sbjct: 1   MSSDGTFLDQAIKLAFDNIEQGGRPFGAVVVKGGEVIATGVNRMQADCDPTAHAELLALR 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASN 104
              + L    L   ++Y + +PC MC AA+ +A + ++ +  SN
Sbjct: 61  AAGKALRSPRLDGCEVYASGQPCPMCFAAMRMAGVEKIRFAYSN 104


>gi|114703609|emb|CAL46259.1| cytidine deaminase [Paspalum simplex]
          Length = 148

 Score = 60.1 bits (144), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 38/96 (39%), Positives = 56/96 (58%), Gaps = 1/96 (1%)

Query: 7   FMSCALEEA-QNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           F+S A+EEA +     +  P GAV V N++++    N   +  D TAHAE+ AIR  C+ 
Sbjct: 34  FLSKAVEEAYRGVDCGDGGPFGAVVVRNDEVVVSCHNMVLKHTDPTAHAEVTAIREACKK 93

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
           L +  L + ++Y + EPC MC  A+ L  I+RL YG
Sbjct: 94  LGKIELSDCEIYASCEPCPMCFGAVYLFGIKRLVYG 129


>gi|308160868|gb|EFO63335.1| Cytosine deaminase, putative [Giardia lamblia P15]
          Length = 165

 Score = 60.1 bits (144), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 41/138 (29%), Positives = 71/138 (51%), Gaps = 4/138 (2%)

Query: 12  LEEAQNAALRNEIPVG-AVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEI 70
            +EA  A +  E+PVG A+   +  I++   N   + ++ T HAE++A+    ++ S   
Sbjct: 5   FKEASLALVEREVPVGCAIVDSDGHILATGRNATNKTRNSTYHAELVALA---QLPSGIN 61

Query: 71  LPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYP 130
           L    LYVT+EPC MCAAA+S+  +  + Y A N K GG  +            +     
Sbjct: 62  LSNCVLYVTIEPCIMCAAALSIVGLTNIIYFARNNKFGGCGSVLDVNNHIESPWTKLNAK 121

Query: 131 GISEQRSRQIIQDFFKER 148
            I ++R+  ++Q+FF+ +
Sbjct: 122 YIHDERAIYLLQEFFERK 139


>gi|73670513|ref|YP_306528.1| dCMP deaminase [Methanosarcina barkeri str. Fusaro]
 gi|72397675|gb|AAZ71948.1| dCMP deaminase [Methanosarcina barkeri str. Fusaro]
          Length = 157

 Score = 60.1 bits (144), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 40/117 (34%), Positives = 58/117 (49%), Gaps = 2/117 (1%)

Query: 6   VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           +FM  A+E +     +   P GAV V N +I++ + N    L D TAHAEI  IR   R 
Sbjct: 7   LFMKRAIELSLENVKKGGGPFGAVIVRNGEILAESCNMVTALNDPTAHAEINVIREAARK 66

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG--ASNPKGGGIENGTQFYTLA 120
           L    L    +Y + EPC MC  AI  ARI ++ +   AS+ +  G  +   +  +A
Sbjct: 67  LETFDLSGCTIYASCEPCPMCLGAIYWARIGKVVFANTASDAQKIGFADSLIYSEIA 123


>gi|88604201|ref|YP_504379.1| CMP/dCMP deaminase, zinc-binding [Methanospirillum hungatei JF-1]
 gi|88189663|gb|ABD42660.1| CMP/dCMP deaminase, zinc-binding protein [Methanospirillum hungatei
           JF-1]
          Length = 274

 Score = 59.7 bits (143), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 38/105 (36%), Positives = 52/105 (49%), Gaps = 3/105 (2%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  A++EA+       IP+G+V V +  II R  NR  +  D   HAEI  ++   RI 
Sbjct: 134 FMEAAIQEAEKGKEEGGIPIGSVLVRDGVIIGRGHNRRVQNNDPMVHAEIDCLQNAGRIG 193

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIE 111
           S +   +  LY TL PC +CA A+    I R+  G S    G  E
Sbjct: 194 SYQ---DCILYSTLMPCFLCAGAVVQFHIPRVIVGESRTFSGARE 235


>gi|288934196|ref|YP_003438255.1| CMP/dCMP deaminase zinc-binding protein [Klebsiella variicola
           At-22]
 gi|290508399|ref|ZP_06547770.1| cytidine/deoxycytidylate deaminase [Klebsiella sp. 1_1_55]
 gi|288888925|gb|ADC57243.1| CMP/dCMP deaminase zinc-binding protein [Klebsiella variicola
           At-22]
 gi|289777793|gb|EFD85790.1| cytidine/deoxycytidylate deaminase [Klebsiella sp. 1_1_55]
          Length = 152

 Score = 59.7 bits (143), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 42/141 (29%), Positives = 68/141 (48%), Gaps = 11/141 (7%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M   + ++  AL  A+        P GAV V +++I++ A N      D TAHAE+ A+R
Sbjct: 1   MSADDRYLQRALALAKQNIADGGRPFGAVLVRHDEIVAEAVNTFHLNGDPTAHAELNAVR 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
                L  E+L E  +Y + +PC MC +A+ L  +R +++  SN      ++G  F    
Sbjct: 61  ELAARLGSEVLRECVIYASGQPCPMCLSALYLTGVREVFFANSN------QDGEPFQLST 114

Query: 121 TCHHSPEIYPGISEQRSRQII 141
           T      IY  + +  SRQ +
Sbjct: 115 TA-----IYQQLQQPLSRQTL 130


>gi|218438113|ref|YP_002376442.1| CMP/dCMP deaminase zinc-binding [Cyanothece sp. PCC 7424]
 gi|218170841|gb|ACK69574.1| CMP/dCMP deaminase zinc-binding [Cyanothece sp. PCC 7424]
          Length = 147

 Score = 59.7 bits (143), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 42/142 (29%), Positives = 66/142 (46%), Gaps = 12/142 (8%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           + FM  A+ EA+       IP+G+V V + KI+ R  N+  +  D   HAEI  +R   R
Sbjct: 6   DSFMQAAIAEARQGLQEGGIPIGSVLVKDGKILGRGHNKRVQDNDPVTHAEIDCLRNAGR 65

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
           +   +   +  LY TL PC +CA A+    I+++  G S    G  E           H 
Sbjct: 66  VGQYQ---DTILYSTLMPCYLCAGAVVQFGIKKVIAGESATFAGARE-------FMESHG 115

Query: 125 SPEIYPGISEQRSRQIIQDFFK 146
              I   ++E   +Q++QDF +
Sbjct: 116 VEVIDLNLNE--CKQLMQDFIE 135


>gi|186682609|ref|YP_001865805.1| CMP/dCMP deaminase, zinc-binding [Nostoc punctiforme PCC 73102]
 gi|186465061|gb|ACC80862.1| CMP/dCMP deaminase, zinc-binding [Nostoc punctiforme PCC 73102]
          Length = 141

 Score = 59.7 bits (143), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 36/97 (37%), Positives = 49/97 (50%), Gaps = 4/97 (4%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  AL +A+      + P GAV V +N++++ A N      D +AHAEI  IR     L
Sbjct: 6   FMRLALAQAK----EGDTPYGAVIVKDNEVVAVAHNTVSRDNDPSAHAEINVIRSLTAKL 61

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
               L    +Y T EPC MCA A   + +  + YGAS
Sbjct: 62  KNHFLEGYSIYTTCEPCPMCATACVWSGLSEIVYGAS 98


>gi|333031276|ref|ZP_08459337.1| Guanine deaminase [Bacteroides coprosuis DSM 18011]
 gi|332741873|gb|EGJ72355.1| Guanine deaminase [Bacteroides coprosuis DSM 18011]
          Length = 155

 Score = 59.7 bits (143), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 33/96 (34%), Positives = 47/96 (48%)

Query: 21  RNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80
           R+  P GAV   + +I++   NR  +  D TAHAE+ AIR     L    L   ++Y + 
Sbjct: 20  RDGGPFGAVIAKDGEIVATGVNRVTDSCDPTAHAEVSAIRAAAEKLKTFDLSGYEIYSSC 79

Query: 81  EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116
           EPC MC  AI  AR+ +LY+  +      I     F
Sbjct: 80  EPCPMCLGAIYWARLDKLYFANTKTDAKDIGFDDSF 115


>gi|226330044|ref|ZP_03805562.1| hypothetical protein PROPEN_03957 [Proteus penneri ATCC 35198]
 gi|225200839|gb|EEG83193.1| hypothetical protein PROPEN_03957 [Proteus penneri ATCC 35198]
          Length = 324

 Score = 59.7 bits (143), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 33/95 (34%), Positives = 54/95 (56%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           N F+  A+  A +       P GAV V N ++I+ A N+     D TAHAE+LA+R   +
Sbjct: 209 NQFIQQAISLAMDNVKVGGRPFGAVIVNNGQVIASAVNQIVTTNDPTAHAELLALREAGK 268

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLY 99
           +L +  L +  +Y + +PC MC AA+ +A I +++
Sbjct: 269 VLGRTKLDDCIVYASGQPCPMCLAAMRMAGISKIF 303


>gi|50305461|ref|XP_452690.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
 gi|49641823|emb|CAH01541.1| KLLA0C10989p [Kluyveromyces lactis]
          Length = 238

 Score = 59.7 bits (143), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 40/118 (33%), Positives = 61/118 (51%), Gaps = 6/118 (5%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLN--NKIISRAGNRNRELKDVTAHAEILA 58
           M +  + M  A+  A+ A    E PV  + V +  NK+I+   N   E     +HAE + 
Sbjct: 1   MSQDLLHMRTAITLAKYALDHEETPVACIFVHSKLNKVIAYGMNGTNESISGISHAEFMG 60

Query: 59  IRMGCRILSQE--ILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           I+        +  IL EV LYVT+EPC MCA+A+    I+++ +G  N + GG  NG+
Sbjct: 61  IKQIQEKYGTDPKILSEVVLYVTVEPCIMCASALKQLGIKKVVFGCGNERFGG--NGS 116


>gi|71423764|ref|XP_812564.1| deaminase [Trypanosoma cruzi strain CL Brener]
 gi|70877358|gb|EAN90713.1| deaminase, putative [Trypanosoma cruzi]
          Length = 202

 Score = 59.7 bits (143), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 48/157 (30%), Positives = 73/157 (46%), Gaps = 17/157 (10%)

Query: 4   GNVFMSCALEEAQ-----NAA-LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57
           G V + C L  A+     NA  L +  P  + A L + I +R  N   +     AHAE +
Sbjct: 31  GEVPVGCVLVPAEATCPANAGRLDDNNPNNSGASLGSLIAARGRNATNKEHHALAHAEFV 90

Query: 58  AIRMGCRILSQE------ILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIE 111
           A+    R  +++       L    LYV +EPC MCAA +   RI+++Y+G  NP+ GG  
Sbjct: 91  AVEALLRDAAEKGRKPPASLAGYVLYVVVEPCIMCAAMLLYNRIKKVYFGCGNPRFGG-- 148

Query: 112 NGTQFYTLATCHHSPEIYPGISEQRSRQ---IIQDFF 145
           NGT     A    S   Y      R+ +   ++Q+F+
Sbjct: 149 NGTVLAVHAAKSTSAPAYESCGGHRAEEAIALLQEFY 185


>gi|281421106|ref|ZP_06252105.1| guanine deaminase [Prevotella copri DSM 18205]
 gi|281404641|gb|EFB35321.1| guanine deaminase [Prevotella copri DSM 18205]
          Length = 155

 Score = 59.7 bits (143), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 37/110 (33%), Positives = 50/110 (45%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
            M  A+E ++N+      P GAV   +  II+ A N      D TAHAE+  IR   R L
Sbjct: 6   LMHRAIELSKNSVKTGGGPFGAVIAKDGIIIAEASNSVTIDLDPTAHAEVNCIRQATRKL 65

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116
               L   ++Y + EPC MC  AI  A + R+YY         I    +F
Sbjct: 66  KTFNLEGCEIYTSCEPCPMCLGAIYWAHLDRIYYANDRKDAAKIGFDDEF 115


>gi|154759286|ref|NP_001094076.1| tRNA-specific adenosine deaminase-like protein 3 [Mus musculus]
 gi|81892416|sp|Q6PAT0|ADAT3_MOUSE RecName: Full=tRNA-specific adenosine deaminase-like protein 3;
           AltName: Full=tRNA-specific adenosine-34 deaminase
           subunit ADAT3
 gi|148699580|gb|EDL31527.1| secretory carrier membrane protein 4, isoform CRA_d [Mus musculus]
          Length = 349

 Score = 59.7 bits (143), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 36/86 (41%), Positives = 50/86 (58%), Gaps = 9/86 (10%)

Query: 64  RILSQEILPEV----DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF--Y 117
           R L ++ LP V    DLYVT EPC MCA A+  ARI+R++YGA +P G     GT F  +
Sbjct: 266 RKLDEDSLPYVCTGYDLYVTREPCVMCAMALVHARIQRVFYGAPSPDGA---LGTLFRVH 322

Query: 118 TLATCHHSPEIYPGISEQRSRQIIQD 143
                +H  +++ GI E + RQ+  D
Sbjct: 323 ARPDLNHRFQVFRGILEDQCRQLDPD 348


>gi|260593324|ref|ZP_05858782.1| guanine deaminase [Prevotella veroralis F0319]
 gi|260534736|gb|EEX17353.1| guanine deaminase [Prevotella veroralis F0319]
          Length = 155

 Score = 59.7 bits (143), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 31/92 (33%), Positives = 41/92 (44%)

Query: 25  PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84
           P GA+     +II+   N      D TAHAE+ AIR  C  L    L   ++Y + EPC 
Sbjct: 24  PFGAIIARKGEIIAEGSNGVTIYNDPTAHAEVTAIRKACEKLGTFDLTGCEIYTSCEPCP 83

Query: 85  MCAAAISLARIRRLYYGASNPKGGGIENGTQF 116
           MC  AI  A + ++YY         I     F
Sbjct: 84  MCLGAIYWAHLDKIYYANDRKDAADIGFDDDF 115


>gi|237708779|ref|ZP_04539260.1| cytidine/deoxycytidylate deaminase [Bacteroides sp. 9_1_42FAA]
 gi|265755955|ref|ZP_06090422.1| cytidine/deoxycytidylate deaminase [Bacteroides sp. 3_1_33FAA]
 gi|229457205|gb|EEO62926.1| cytidine/deoxycytidylate deaminase [Bacteroides sp. 9_1_42FAA]
 gi|263234033|gb|EEZ19634.1| cytidine/deoxycytidylate deaminase [Bacteroides sp. 3_1_33FAA]
          Length = 155

 Score = 59.7 bits (143), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 31/77 (40%), Positives = 41/77 (53%)

Query: 25  PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84
           P GAV   + +II+   NR     D TAHAE+ AIR     L    L   ++Y + EPC 
Sbjct: 24  PFGAVIAKDGEIIATGVNRVTSQCDPTAHAEVSAIRAAATKLGTFNLSGCEIYTSCEPCP 83

Query: 85  MCAAAISLARIRRLYYG 101
           MC  AI  AR+ ++YY 
Sbjct: 84  MCLGAIYWARLDKMYYA 100


>gi|268680105|ref|YP_003304536.1| cytosine deaminase [Sulfurospirillum deleyianum DSM 6946]
 gi|268618136|gb|ACZ12501.1| Cytosine deaminase [Sulfurospirillum deleyianum DSM 6946]
          Length = 146

 Score = 59.7 bits (143), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 35/95 (36%), Positives = 48/95 (50%), Gaps = 1/95 (1%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           F+  A+EEAQ       IP+G+V V++ KI+ R  N+  +      HAE+  +    R L
Sbjct: 5   FLEAAIEEAQKGLDEGGIPIGSVLVIDGKIVGRGHNQRVQKGSAILHAEMDCLENAGR-L 63

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
           S        LY TL PC MC+ AI L  I +L  G
Sbjct: 64  SAADYRNATLYSTLSPCDMCSGAILLYGIPKLVIG 98


>gi|209885117|ref|YP_002288974.1| CMP/dCMP deaminase, zinc-binding [Oligotropha carboxidovorans OM5]
 gi|209873313|gb|ACI93109.1| CMP/dCMP deaminase, zinc-binding [Oligotropha carboxidovorans OM5]
          Length = 227

 Score = 59.7 bits (143), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 32/98 (32%), Positives = 55/98 (56%), Gaps = 2/98 (2%)

Query: 8   MSCALEEAQNAALRNEI--PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M+ A++  + A + ++   P GAV V + ++++ +GN      D +AHAE+ AIR+ C+ 
Sbjct: 78  MALAIQTMRQAGIVDKTGGPFGAVVVRDGEVLAASGNSVLRDNDPSAHAEVNAIRIACKK 137

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
           +    L    L+ + E C MC A    ARI ++YY A+
Sbjct: 138 IGAPNLRGATLFTSCECCPMCYATAYWARIDKIYYAAA 175


>gi|107101945|ref|ZP_01365863.1| hypothetical protein PaerPA_01002992 [Pseudomonas aeruginosa PACS2]
 gi|254235497|ref|ZP_04928820.1| hypothetical protein PACG_01415 [Pseudomonas aeruginosa C3719]
 gi|254240930|ref|ZP_04934252.1| hypothetical protein PA2G_01610 [Pseudomonas aeruginosa 2192]
 gi|126167428|gb|EAZ52939.1| hypothetical protein PACG_01415 [Pseudomonas aeruginosa C3719]
 gi|126194308|gb|EAZ58371.1| hypothetical protein PA2G_01610 [Pseudomonas aeruginosa 2192]
          Length = 151

 Score = 59.7 bits (143), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 37/118 (31%), Positives = 58/118 (49%), Gaps = 2/118 (1%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
            +FM  A+  A+        P GAV V + ++++R  N+  E  D +AHAE+ AIR   +
Sbjct: 4   EIFMREAIALARANVEAGGRPFGAVLVRDGRVLARGVNQIHETHDPSAHAELQAIRQASQ 63

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGG--GIENGTQFYTLA 120
            L    L    +Y +  PC MC AA+ L  I+  ++  SN  G   G+   T +  +A
Sbjct: 64  ALGSPRLDGCVIYASGHPCPMCLAAMHLCGIQAAWFAYSNEDGEAFGLSTATLYAEMA 121


>gi|298483515|ref|ZP_07001691.1| guanine deaminase [Bacteroides sp. D22]
 gi|298270272|gb|EFI11857.1| guanine deaminase [Bacteroides sp. D22]
          Length = 156

 Score = 59.7 bits (143), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 35/96 (36%), Positives = 50/96 (52%), Gaps = 1/96 (1%)

Query: 7   FMSCALEEAQNAALRNEIPVGAV-AVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
            M  A+E ++   +    P GAV A  + +I++   NR     D TAHAE+ AIR     
Sbjct: 6   LMRKAIELSKENVVNGGGPFGAVIATKDGEIVATGVNRVTASCDPTAHAEVSAIRAAAAK 65

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
           L    L   ++Y + EPC MC  AI  AR+ ++YYG
Sbjct: 66  LGTFDLSGYEIYTSCEPCPMCLGAIYWARLDKMYYG 101


>gi|218891523|ref|YP_002440390.1| putative deaminase [Pseudomonas aeruginosa LESB58]
 gi|218771749|emb|CAW27523.1| probable deaminase [Pseudomonas aeruginosa LESB58]
          Length = 151

 Score = 59.7 bits (143), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 37/118 (31%), Positives = 58/118 (49%), Gaps = 2/118 (1%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
            +FM  A+  A+        P GAV V + ++++R  N+  E  D +AHAE+ AIR   +
Sbjct: 4   EIFMREAIALARANVEAGGRPFGAVLVRDGRVLARGVNQIHETHDPSAHAELQAIRQASQ 63

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGG--GIENGTQFYTLA 120
            L    L    +Y +  PC MC AA+ L  I+  ++  SN  G   G+   T +  +A
Sbjct: 64  ALGSPRLDGCVIYASGHPCPMCLAAMHLCGIQAAWFAYSNEDGEPFGLSTATLYAEMA 121


>gi|27379891|ref|NP_771420.1| cytosine deaminase [Bradyrhizobium japonicum USDA 110]
 gi|27353044|dbj|BAC50045.1| bll4780 [Bradyrhizobium japonicum USDA 110]
          Length = 150

 Score = 59.7 bits (143), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 31/97 (31%), Positives = 54/97 (55%), Gaps = 4/97 (4%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  A+ EA+ +  +  +P+GAV   +N+II+R  N   +  +V  H E+  +R    I 
Sbjct: 10  FMLEAIREAEASIAQGGLPIGAVLTRDNQIIARGHNNRVQENNVILHGEMSCLREAGAIT 69

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
             + +    +Y TL PC+MCA A++L +++ +  G S
Sbjct: 70  FHDTI----MYTTLSPCSMCAGALALFKVKLVVIGES 102


>gi|116050443|ref|YP_790738.1| putative deaminase [Pseudomonas aeruginosa UCBPP-PA14]
 gi|115585664|gb|ABJ11679.1| putative deaminase [Pseudomonas aeruginosa UCBPP-PA14]
          Length = 151

 Score = 59.3 bits (142), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 33/98 (33%), Positives = 51/98 (52%), Gaps = 2/98 (2%)

Query: 25  PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84
           P GAV V + ++++R  N+  E  D +AHAE+ AIR   + L    L    +Y +  PC 
Sbjct: 24  PFGAVLVRDGRVLARGVNQIHETHDPSAHAELQAIRQASQALGSPHLDGCVIYASGHPCP 83

Query: 85  MCAAAISLARIRRLYYGASNPKGG--GIENGTQFYTLA 120
           MC AA+ L  I+  ++  SN  G   G+   T +  +A
Sbjct: 84  MCLAAMHLCGIQAAWFAYSNEDGEAFGLSTATLYAEMA 121


>gi|330957624|gb|EGH57884.1| cytosine deaminase [Pseudomonas syringae pv. maculicola str.
           ES4326]
          Length = 145

 Score = 59.3 bits (142), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 35/97 (36%), Positives = 49/97 (50%), Gaps = 1/97 (1%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           + FM  A++EA+       IP+G+V V + KII R  NR  +    T H E+ A+    R
Sbjct: 2   DAFMQAAIDEARLGLDEGGIPIGSVIVHDGKIIGRGHNRRVQEGSPTRHGEMDALENAGR 61

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
                +  +  LY TL PC MC+ AI L  IR +  G
Sbjct: 62  -QPASVYRDAVLYTTLSPCAMCSGAILLYGIRTVIVG 97


>gi|160876335|ref|YP_001555651.1| cytosine deaminase [Shewanella baltica OS195]
 gi|160861857|gb|ABX50391.1| Cytosine deaminase [Shewanella baltica OS195]
 gi|315268524|gb|ADT95377.1| Cytosine deaminase [Shewanella baltica OS678]
          Length = 145

 Score = 59.3 bits (142), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 31/95 (32%), Positives = 50/95 (52%), Gaps = 1/95 (1%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           F++ A+EEA+   +   IP+G+V V++ KI+ R  N+  +      HAE+  +    R  
Sbjct: 4   FLAAAIEEAKQGLVEGGIPIGSVLVIDGKIVGRGHNKRVQKGSSVLHAEMDCLENAGRFS 63

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
           + E      LY TL PC MC+ A+ L  I ++  G
Sbjct: 64  AAE-YQRATLYSTLSPCDMCSGAVLLYGIPKVIVG 97


>gi|91085973|ref|XP_971753.1| PREDICTED: similar to tRNA-specific adenosine-34 deaminase subunit
           Tad2p/ADAT2, putative [Tribolium castaneum]
          Length = 160

 Score = 59.3 bits (142), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 40/145 (27%), Positives = 63/145 (43%), Gaps = 9/145 (6%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  A + A  A    E+PVG + V NN  I+   N   + K+ T HAEI  I        
Sbjct: 1   MERAFQHAYEALAAQEVPVGCIFVHNNTEIAFGRNTVNQTKNATRHAEINCIEQVTDYCK 60

Query: 68  Q------EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
                  +    V ++VT+EPC MC  A+   +++ + +G  N + GG    T F     
Sbjct: 61  TNNFNLIDFFKGVTVFVTVEPCIMCINALFDLQVQTIVFGCRNDRFGG---RTVFDVAGV 117

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFK 146
            H    I  G     +  ++++F+K
Sbjct: 118 VHPKTIIKGGFRADEAMNLLKEFYK 142


>gi|300718994|ref|YP_003743797.1| Cytidine/deoxycytidylate deaminase [Erwinia billingiae Eb661]
 gi|299064830|emb|CAX61950.1| Cytidine/deoxycytidylate deaminase [Erwinia billingiae Eb661]
          Length = 157

 Score = 59.3 bits (142), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 27/76 (35%), Positives = 43/76 (56%)

Query: 25  PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84
           P   V V N +I++ + N+  +  D TAHAEILAIR  C+ L  E L + ++Y+   PC 
Sbjct: 21  PFATVIVRNGEIVAESANKAAQSHDPTAHAEILAIREACKKLQTENLSDCEIYILASPCP 80

Query: 85  MCAAAISLARIRRLYY 100
           MC  ++     +++ Y
Sbjct: 81  MCLGSLYYCSPKQVIY 96


>gi|17232126|ref|NP_488674.1| hypothetical protein alr4634 [Nostoc sp. PCC 7120]
 gi|17133771|dbj|BAB76333.1| alr4634 [Nostoc sp. PCC 7120]
          Length = 140

 Score = 59.3 bits (142), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/97 (39%), Positives = 51/97 (52%), Gaps = 4/97 (4%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  A+ EA+    + + P GAV V +N++++ A N      D +AHAEI  IR     L
Sbjct: 6   FMRLAIAEAK----KGDAPYGAVIVKDNQVVAFAHNTVARDNDPSAHAEINVIRRLTAQL 61

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
               L    +Y T EPC MCAAA   + I  + YGAS
Sbjct: 62  QSFSLAGYSIYTTGEPCPMCAAACVWSGIAEIIYGAS 98


>gi|206578758|ref|YP_002237260.1| cytidine/deoxycytidylate deaminase family protein [Klebsiella
           pneumoniae 342]
 gi|206567816|gb|ACI09592.1| cytidine/deoxycytidylate deaminase family protein [Klebsiella
           pneumoniae 342]
          Length = 152

 Score = 59.3 bits (142), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/117 (32%), Positives = 60/117 (51%), Gaps = 11/117 (9%)

Query: 25  PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84
           P GAV V +++I++ A N      D TAHAE+ A+R     L  E+L E  +Y + +PC 
Sbjct: 25  PFGAVLVRHDEIVAEAVNTFHLNGDPTAHAELNAVRDLAARLGSEVLRECVIYASGQPCP 84

Query: 85  MCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141
           MC +A+ L  +R +++  SN      ++G  F    T      IY  + +  SRQ +
Sbjct: 85  MCLSALYLTGVREVFFANSN------QDGEPFQLSTTA-----IYQQLQQPLSRQTL 130


>gi|15597695|ref|NP_251189.1| deaminase [Pseudomonas aeruginosa PAO1]
 gi|296389082|ref|ZP_06878557.1| putative deaminase [Pseudomonas aeruginosa PAb1]
 gi|9948552|gb|AAG05887.1|AE004677_4 probable deaminase [Pseudomonas aeruginosa PAO1]
          Length = 151

 Score = 59.3 bits (142), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 33/98 (33%), Positives = 51/98 (52%), Gaps = 2/98 (2%)

Query: 25  PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84
           P GAV V + ++++R  N+  E  D +AHAE+ AIR   + L    L    +Y +  PC 
Sbjct: 24  PFGAVLVRDGRVLARGVNQIHETHDPSAHAELQAIRQASQALGSPRLDGCVIYASGHPCP 83

Query: 85  MCAAAISLARIRRLYYGASNPKGG--GIENGTQFYTLA 120
           MC AA+ L  I+  ++  SN  G   G+   T +  +A
Sbjct: 84  MCLAAMHLCGIQAAWFAYSNEDGEAFGLSTATLYAEMA 121


>gi|49075844|gb|AAT49501.1| PA2499 [synthetic construct]
          Length = 152

 Score = 59.3 bits (142), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 33/98 (33%), Positives = 51/98 (52%), Gaps = 2/98 (2%)

Query: 25  PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84
           P GAV V + ++++R  N+  E  D +AHAE+ AIR   + L    L    +Y +  PC 
Sbjct: 24  PFGAVLVRDGRVLARGVNQIHETHDPSAHAELQAIRQASQALGSPRLDGCVIYASGHPCP 83

Query: 85  MCAAAISLARIRRLYYGASNPKGG--GIENGTQFYTLA 120
           MC AA+ L  I+  ++  SN  G   G+   T +  +A
Sbjct: 84  MCLAAMHLCGIQAAWFAYSNEDGEAFGLSTATLYAEMA 121


>gi|313107393|ref|ZP_07793584.1| putative deaminase [Pseudomonas aeruginosa 39016]
 gi|310880086|gb|EFQ38680.1| putative deaminase [Pseudomonas aeruginosa 39016]
          Length = 151

 Score = 59.3 bits (142), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 33/98 (33%), Positives = 51/98 (52%), Gaps = 2/98 (2%)

Query: 25  PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84
           P GAV V + ++++R  N+  E  D +AHAE+ AIR   + L    L    +Y +  PC 
Sbjct: 24  PFGAVLVRDGRVLARGVNQIHETHDPSAHAELQAIRQASQALGSPRLDGCVIYASGHPCP 83

Query: 85  MCAAAISLARIRRLYYGASNPKGG--GIENGTQFYTLA 120
           MC AA+ L  I+  ++  SN  G   G+   T +  +A
Sbjct: 84  MCLAAMHLCGIQAAWFAYSNEDGEPFGLSTATLYAEMA 121


>gi|319652245|ref|ZP_08006363.1| hypothetical protein HMPREF1013_02976 [Bacillus sp. 2_A_57_CT2]
 gi|317396068|gb|EFV76788.1| hypothetical protein HMPREF1013_02976 [Bacillus sp. 2_A_57_CT2]
          Length = 150

 Score = 59.3 bits (142), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 34/94 (36%), Positives = 45/94 (47%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  A+E A N       P GAV V    II+   N   +  DV+ HAE+LAIR      
Sbjct: 4   FMKRAIELAINNVKDGGQPFGAVLVKEQDIIAEGVNELHKKHDVSGHAELLAIRRAQEQF 63

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
               L    +Y + EPC +C  A+  A I ++YY
Sbjct: 64  QTNDLAGFTMYASGEPCPLCLTAMYFAGIDKVYY 97


>gi|24372975|ref|NP_717017.1| cytosine deaminase [Shewanella oneidensis MR-1]
 gi|24347125|gb|AAN54462.1|AE015583_7 cytosine deaminase [Shewanella oneidensis MR-1]
          Length = 145

 Score = 59.3 bits (142), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 31/95 (32%), Positives = 51/95 (53%), Gaps = 1/95 (1%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           F+  A++EA+       IP+G+V V++ KII+R  N+  +      HAE+  +    R+ 
Sbjct: 4   FLQAAIDEAKQGLAEGGIPIGSVLVIDGKIIARGHNKRVQQGSAVLHAEMDCLENAGRLT 63

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
           + +   +  LY TL PC MC+ AI L  I ++  G
Sbjct: 64  AAD-YQKATLYSTLSPCDMCSGAILLYGIPKVVVG 97


>gi|298715154|emb|CBJ27842.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 364

 Score = 58.9 bits (141), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 26/69 (37%), Positives = 42/69 (60%)

Query: 75  DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISE 134
           DLYVT EPC MCA A+  +R+RR+ YG  + + G + + T  +TL + +H+  ++ G+  
Sbjct: 286 DLYVTREPCLMCAMALVHSRVRRVIYGVRDTERGCLGSVTMLHTLTSLNHNYRVFEGVCA 345

Query: 135 QRSRQIIQD 143
              RQ + D
Sbjct: 346 DECRQSLSD 354


>gi|213409075|ref|XP_002175308.1| tRNA-specific adenosine deaminase subunit tad2 [Schizosaccharomyces
           japonicus yFS275]
 gi|212003355|gb|EEB09015.1| tRNA-specific adenosine deaminase subunit tad2 [Schizosaccharomyces
           japonicus yFS275]
          Length = 365

 Score = 58.9 bits (141), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 32/95 (33%), Positives = 50/95 (52%), Gaps = 4/95 (4%)

Query: 53  HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN 112
           HAE++A+    +     I  EV LYVT+EPC MCAAA+    I+ +Y+G  N + GG   
Sbjct: 242 HAELVAVEDILKRYPPSIFEEVTLYVTVEPCLMCAAALKQLHIKEVYFGCGNDRFGGC-- 299

Query: 113 GTQFYTLATCHHSP--EIYPGISEQRSRQIIQDFF 145
           G+ F         P   +YPG+    +  +++ F+
Sbjct: 300 GSVFSINKDPSVDPPYPVYPGLYRAEAIMLMRQFY 334


>gi|226506666|ref|NP_001147339.1| cytidine/deoxycytidylate deaminase family protein [Zea mays]
 gi|195610278|gb|ACG26969.1| cytidine/deoxycytidylate deaminase family protein [Zea mays]
          Length = 184

 Score = 58.9 bits (141), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 27/67 (40%), Positives = 41/67 (61%)

Query: 38  SRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRR 97
           S + N  R+  D +AHAE+ AIR  C+ L +  L   ++Y + EPC MC   I LA+I++
Sbjct: 65  SSSHNSVRKDADPSAHAEVTAIRQACKKLGKTSLSGCEIYTSCEPCPMCLGLIRLAKIKK 124

Query: 98  LYYGASN 104
           + YGA +
Sbjct: 125 VVYGAKS 131


>gi|327542899|gb|EGF29355.1| cytosine deaminase [Rhodopirellula baltica WH47]
          Length = 149

 Score = 58.9 bits (141), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 33/95 (34%), Positives = 52/95 (54%), Gaps = 1/95 (1%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           F+  AL+EA+     + IP+G+V V++N+I+SR  NR  +      HAE+  +    R+ 
Sbjct: 4   FLQAALDEARLGLNEHGIPIGSVLVIDNEIVSRGHNRRIQNGSSILHAEMDCLERAGRLT 63

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
           + +      LY TL PC MC+ A  L +I R+  G
Sbjct: 64  AND-YSRSTLYSTLSPCDMCSGAALLYKIPRIIVG 97


>gi|212693618|ref|ZP_03301746.1| hypothetical protein BACDOR_03136 [Bacteroides dorei DSM 17855]
 gi|237724217|ref|ZP_04554698.1| cytidine/deoxycytidylate deaminase [Bacteroides sp. D4]
 gi|212663871|gb|EEB24445.1| hypothetical protein BACDOR_03136 [Bacteroides dorei DSM 17855]
 gi|229437405|gb|EEO47482.1| cytidine/deoxycytidylate deaminase [Bacteroides dorei 5_1_36/D4]
          Length = 187

 Score = 58.9 bits (141), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 31/77 (40%), Positives = 41/77 (53%)

Query: 25  PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84
           P GAV   + +II+   NR     D TAHAE+ AIR     L    L   ++Y + EPC 
Sbjct: 56  PFGAVIAKDGEIIATGVNRVTSQCDPTAHAEVSAIRAAATKLGTFNLSGCEIYTSCEPCP 115

Query: 85  MCAAAISLARIRRLYYG 101
           MC  AI  AR+ ++YY 
Sbjct: 116 MCLGAIYWARLDKMYYA 132


>gi|92118729|ref|YP_578458.1| CMP/dCMP deaminase, zinc-binding [Nitrobacter hamburgensis X14]
 gi|91801623|gb|ABE63998.1| CMP/dCMP deaminase, zinc-binding protein [Nitrobacter hamburgensis
           X14]
          Length = 211

 Score = 58.9 bits (141), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 33/98 (33%), Positives = 54/98 (55%), Gaps = 2/98 (2%)

Query: 8   MSCALEEAQNAALRNEI--PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           MS A+   + A + ++   P GAV V + ++++ +GN      D +AHAE+ AIR+ C+ 
Sbjct: 62  MSLAILTMRQAGVVDKTGGPFGAVVVRDGEVLAASGNSVLRDNDPSAHAEVNAIRIACKK 121

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
           +    L    L+ + E C MC A    ARI ++YY A+
Sbjct: 122 IGAPNLRGATLFTSCECCPMCYATAYWARISKIYYAAA 159


>gi|104782115|ref|YP_608613.1| cytosine deaminase [Pseudomonas entomophila L48]
 gi|95111102|emb|CAK15822.1| Cytosine deaminase [Pseudomonas entomophila L48]
          Length = 141

 Score = 58.9 bits (141), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 33/94 (35%), Positives = 47/94 (50%), Gaps = 1/94 (1%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  A++EA+       IP+G+V V + KII R  NR  +      H E+ A+    R   
Sbjct: 1   MQAAIDEARKGLEEGGIPIGSVLVHDGKIIGRGHNRRVQKGSAILHGEMDALENAGR-QP 59

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
             +  +  LY TL PC MC+ AI L  I+R+  G
Sbjct: 60  ASVYQQATLYTTLSPCAMCSGAILLYGIKRVVIG 93


>gi|220907233|ref|YP_002482544.1| CMP/dCMP deaminase [Cyanothece sp. PCC 7425]
 gi|219863844|gb|ACL44183.1| CMP/dCMP deaminase zinc-binding [Cyanothece sp. PCC 7425]
          Length = 144

 Score = 58.9 bits (141), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 43/144 (29%), Positives = 68/144 (47%), Gaps = 12/144 (8%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           + FM  A+ EA+       IP+G+V V N +II R  N+  +  +   HAEI  ++   R
Sbjct: 2   DQFMQAAIAEARTGLQEGGIPIGSVLVKNGEIIGRGHNQRVQQGNPIIHAEIDCLQQAGR 61

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
           I   +   +  LY TL PC +CA A+    I+++  G S    G  E    F       H
Sbjct: 62  IGRYQ---DTTLYSTLMPCYLCAGAVVQFGIKKVIAGESYTFPGARE----FME----SH 110

Query: 125 SPEIYPGISEQRSRQIIQDFFKER 148
             E+   +  Q  +Q++QDF + +
Sbjct: 111 GVEVID-LDLQECKQLMQDFIQAK 133


>gi|119509403|ref|ZP_01628552.1| cytosine deaminase [Nodularia spumigena CCY9414]
 gi|119466017|gb|EAW46905.1| cytosine deaminase [Nodularia spumigena CCY9414]
          Length = 143

 Score = 58.9 bits (141), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 34/97 (35%), Positives = 49/97 (50%), Gaps = 3/97 (3%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  A+ +A+       IP+G+V V + KII R  N+  +  D   HAEI  +R   R+ 
Sbjct: 4   FMEAAIAQAKQGRKEGGIPIGSVLVKDGKIIGRGHNKRVQDNDPVTHAEIDCLRNAGRVG 63

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
           S        LY TL PC +CA A+    I+++  G S
Sbjct: 64  SYR---GTTLYSTLMPCYLCAGAVVQFGIKKVIAGES 97


>gi|312115805|ref|YP_004013401.1| CMP/dCMP deaminase zinc-binding protein [Rhodomicrobium vannielii
           ATCC 17100]
 gi|311220934|gb|ADP72302.1| CMP/dCMP deaminase zinc-binding protein [Rhodomicrobium vannielii
           ATCC 17100]
          Length = 212

 Score = 58.9 bits (141), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 39/127 (30%), Positives = 64/127 (50%), Gaps = 6/127 (4%)

Query: 12  LEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEIL 71
           +E ++ A    + P GA+  L+ +I++ AGNR     D + HAEI+AI    + + +  L
Sbjct: 16  IELSREATREGDYPFGALIALDGEIVAEAGNRAMRDADFSRHAEIIAIAAALKTVGRGGL 75

Query: 72  PEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT------LATCHHS 125
               LY T+EPC MC+  I  A + R+ Y  ++P  GG+   T  +       L     +
Sbjct: 76  ARATLYSTVEPCAMCSFCIREAWVGRVAYALASPAMGGVSKWTILHDADLGRQLPIFGPA 135

Query: 126 PEIYPGI 132
           PE+  G+
Sbjct: 136 PEVVSGL 142


>gi|145347025|ref|XP_001417980.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144578208|gb|ABO96273.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 173

 Score = 58.9 bits (141), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/112 (33%), Positives = 53/112 (47%), Gaps = 16/112 (14%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI-------- 59
           M  AL +A+ A    E+P G     + +I++   N     ++ T HAE  A+        
Sbjct: 1   MRVALAQARLALDEWEVPCGCALARDGEIVAVGRNATNRTRNGTRHAEFEAVDALLDAHG 60

Query: 60  --RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109
             R  CR        +V LYVT EPC MCA A+S   +R + YG +N K GG
Sbjct: 61  GDRAACR------FEDVTLYVTCEPCVMCAGAMSALGVREVVYGCANDKFGG 106


>gi|256376193|ref|YP_003099853.1| CMP/dCMP deaminase zinc-binding [Actinosynnema mirum DSM 43827]
 gi|255920496|gb|ACU36007.1| CMP/dCMP deaminase zinc-binding [Actinosynnema mirum DSM 43827]
          Length = 158

 Score = 58.9 bits (141), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 33/97 (34%), Positives = 50/97 (51%), Gaps = 3/97 (3%)

Query: 25  PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84
           P GA+    +++++   NR     D TAHAE++AIR  CR L    L    L  + EPC 
Sbjct: 27  PFGALVARGDEVVATGANRVTADLDPTAHAEVVAIRAACRALGDFSLAGCVLVSSCEPCP 86

Query: 85  MCAAAISLARIRRLYYGAS--NPKGGGIENGTQFYTL 119
           +C +A   AR+ R+ Y A   +    G ++G  F+ L
Sbjct: 87  LCLSAALWARVERVVYAADRHDAAAVGFDDGV-FHDL 122


>gi|270159339|ref|ZP_06187995.1| cytosine deaminase [Legionella longbeachae D-4968]
 gi|289165841|ref|YP_003455979.1| Cytosine deaminase (Cytosine aminohydrolase) [Legionella
          longbeachae NSW150]
 gi|269987678|gb|EEZ93933.1| cytosine deaminase [Legionella longbeachae D-4968]
 gi|288859014|emb|CBJ12942.1| Cytosine deaminase (Cytosine aminohydrolase) [Legionella
          longbeachae NSW150]
          Length = 149

 Score = 58.9 bits (141), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 33/93 (35%), Positives = 49/93 (52%), Gaps = 9/93 (9%)

Query: 7  FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI----RMG 62
          ++  A+EEA+ +  +  IP+GAV V  ++II R  N+  +      H E+ AI    R  
Sbjct: 8  YLDTAIEEARRSVAQGGIPIGAVLVYKDRIIGRGHNQRVQKGSTILHGEMDAIENAGRQK 67

Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARI 95
           ++  Q I     LY TL PC MC+ AI L +I
Sbjct: 68 AKVYEQSI-----LYTTLSPCAMCSGAILLYKI 95


>gi|294933962|ref|XP_002780922.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
 gi|239891069|gb|EER12717.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
          Length = 294

 Score = 58.9 bits (141), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 39/102 (38%), Positives = 50/102 (49%), Gaps = 1/102 (0%)

Query: 2   KKGNVFMSCALEEAQNAA-LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           K    FM+ A   A     LR+  P GA  V +   IS A N     KD T HAE+ AIR
Sbjct: 17  KVDECFMTAACMSATAGVILRHGGPFGAAVVRDGMPISCAHNTVLYNKDPTCHAEVNAIR 76

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGA 102
              R L +  L +  LY + EPC MC  AI  + ++ +Y GA
Sbjct: 77  HAVRHLGRSELSDCVLYTSCEPCPMCWGAIMASGLKVMYVGA 118


>gi|29345731|ref|NP_809234.1| cytidine/deoxycytidylate deaminase [Bacteroides thetaiotaomicron
           VPI-5482]
 gi|253567719|ref|ZP_04845130.1| cytidine/deoxycytidylate deaminase [Bacteroides sp. 1_1_6]
 gi|298384629|ref|ZP_06994189.1| guanine deaminase [Bacteroides sp. 1_1_14]
 gi|29337624|gb|AAO75428.1| cytidine/deoxycytidylate deaminase [Bacteroides thetaiotaomicron
           VPI-5482]
 gi|251841792|gb|EES69872.1| cytidine/deoxycytidylate deaminase [Bacteroides sp. 1_1_6]
 gi|298262908|gb|EFI05772.1| guanine deaminase [Bacteroides sp. 1_1_14]
          Length = 156

 Score = 58.9 bits (141), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 37/99 (37%), Positives = 51/99 (51%), Gaps = 3/99 (3%)

Query: 25  PVGAV-AVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83
           P GAV A    +II+   NR     D TAHAE+ AIR     L    L   ++Y + EPC
Sbjct: 24  PFGAVIATKEGEIIATGVNRVTSSCDPTAHAEVSAIRAAAAKLGTFNLSGYEIYTSCEPC 83

Query: 84  TMCAAAISLARIRRLYYG--ASNPKGGGIENGTQFYTLA 120
            MC  AI  AR+ ++YYG   ++ K  G ++   +  LA
Sbjct: 84  PMCLGAIYWARLDKMYYGNNKTDAKNIGFDDSFIYDELA 122


>gi|238881956|gb|EEQ45594.1| conserved hypothetical protein [Candida albicans WO-1]
          Length = 270

 Score = 58.9 bits (141), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/109 (34%), Positives = 57/109 (52%), Gaps = 4/109 (3%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M+ +L     A L NE PV  + V   ++KIIS   N      + T HAE +A++     
Sbjct: 1   MAISLFVGYKALLNNETPVSCIVVDSKSDKIISIGYNYTNHSLNGTQHAEFIALQRFGEQ 60

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGT 114
            S     ++ LYVT+EPC MCA+ +    I+++ +G  N + GG  NGT
Sbjct: 61  KSSIDYNDLILYVTVEPCIMCASYLRQLGIKKVIFGCGNDRFGG--NGT 107


>gi|153001599|ref|YP_001367280.1| cytosine deaminase [Shewanella baltica OS185]
 gi|217972471|ref|YP_002357222.1| Cytosine deaminase [Shewanella baltica OS223]
 gi|151366217|gb|ABS09217.1| Cytosine deaminase [Shewanella baltica OS185]
 gi|217497606|gb|ACK45799.1| Cytosine deaminase [Shewanella baltica OS223]
          Length = 145

 Score = 58.9 bits (141), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 41/147 (27%), Positives = 63/147 (42%), Gaps = 26/147 (17%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           F++ A+EEA+       IP+G+V V++ KI+ R  N+  +      HAE+  +    R  
Sbjct: 4   FLAAAIEEAKQGLAEGGIPIGSVLVIDGKIVGRGHNKRVQKGSSVLHAEMDCLENAGRFS 63

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
           + E      LY TL PC MC+ A+ L  I ++  G         EN        T    P
Sbjct: 64  AAE-YQRATLYSTLSPCDMCSGAVLLYGIPKVIVG---------EN--------TTFQGP 105

Query: 127 EIYPG--------ISEQRSRQIIQDFF 145
           E Y          +     +Q++QDF 
Sbjct: 106 EAYVKSRGVDVTVVDNAECKQLMQDFI 132


>gi|332529894|ref|ZP_08405846.1| cmp/dcmp deaminase zinc-binding protein [Hylemonella gracilis ATCC
           19624]
 gi|332040688|gb|EGI77062.1| cmp/dcmp deaminase zinc-binding protein [Hylemonella gracilis ATCC
           19624]
          Length = 170

 Score = 58.9 bits (141), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 32/101 (31%), Positives = 52/101 (51%), Gaps = 1/101 (0%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIR 60
           ++ + ++  A+  + N   R   P GAV V    ++++ A     E  D T HAE  A+R
Sbjct: 15  ERDSSYLRQAITWSANGRARGNRPFGAVIVSEQGEVLAEAWCNTSETGDCTGHAETNAVR 74

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
           +   ++ ++ L    LY + EPC MCA AI  + I R+ YG
Sbjct: 75  LVSPLVDRDTLARATLYSSAEPCVMCAGAIFWSNIGRVVYG 115


>gi|237715975|ref|ZP_04546456.1| cytidine/deoxycytidylate deaminase [Bacteroides sp. D1]
 gi|237722247|ref|ZP_04552728.1| cytidine/deoxycytidylate deaminase [Bacteroides sp. 2_2_4]
 gi|262407589|ref|ZP_06084137.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
 gi|294645725|ref|ZP_06723411.1| guanine deaminase [Bacteroides ovatus SD CC 2a]
 gi|294808352|ref|ZP_06767107.1| guanine deaminase [Bacteroides xylanisolvens SD CC 1b]
 gi|229443622|gb|EEO49413.1| cytidine/deoxycytidylate deaminase [Bacteroides sp. D1]
 gi|229448057|gb|EEO53848.1| cytidine/deoxycytidylate deaminase [Bacteroides sp. 2_2_4]
 gi|262354397|gb|EEZ03489.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
 gi|292638931|gb|EFF57263.1| guanine deaminase [Bacteroides ovatus SD CC 2a]
 gi|294444428|gb|EFG13140.1| guanine deaminase [Bacteroides xylanisolvens SD CC 1b]
 gi|295085135|emb|CBK66658.1| Cytosine/adenosine deaminases [Bacteroides xylanisolvens XB1A]
          Length = 156

 Score = 58.9 bits (141), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 32/78 (41%), Positives = 43/78 (55%), Gaps = 1/78 (1%)

Query: 25  PVGAV-AVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83
           P GAV A  + +I++   NR     D TAHAE+ AIR     L    L   ++Y + EPC
Sbjct: 24  PFGAVIATKDGEIVATGVNRVTASCDPTAHAEVSAIRAAAAKLGTFDLSGYEIYTSCEPC 83

Query: 84  TMCAAAISLARIRRLYYG 101
            MC  AI  AR+ ++YYG
Sbjct: 84  PMCLGAIYWARLDKMYYG 101


>gi|16331502|ref|NP_442230.1| hypothetical protein sll0051 [Synechocystis sp. PCC 6803]
 gi|1001158|dbj|BAA10300.1| sll0051 [Synechocystis sp. PCC 6803]
          Length = 159

 Score = 58.9 bits (141), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 34/98 (34%), Positives = 52/98 (53%), Gaps = 2/98 (2%)

Query: 7   FMSCALEEAQNAALRNEI--PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           +M  A+   ++A + N+   P G V V + ++I  AGN   +  D +AHAE+ AIR  C+
Sbjct: 9   YMRQAIAIMRDAGVVNKTGGPFGVVIVKDGEVIGAAGNSVIQDNDPSAHAEVNAIREACK 68

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGA 102
            +    L    +Y + E C MC A    ARI ++YY A
Sbjct: 69  TVGSWNLEGAVMYSSCECCPMCYATSYWARIDKIYYAA 106


>gi|113971133|ref|YP_734926.1| cytosine deaminase [Shewanella sp. MR-4]
 gi|113885817|gb|ABI39869.1| Cytosine deaminase [Shewanella sp. MR-4]
          Length = 145

 Score = 58.5 bits (140), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 30/95 (31%), Positives = 51/95 (53%), Gaps = 1/95 (1%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           F+  A++EA+       IP+G+V V++ KI++R  N+  +      HAE+  +    R+ 
Sbjct: 4   FLQAAIDEAKQGLAEGGIPIGSVLVIDGKIVARGHNKRVQQGSAVLHAEMDCLENAGRLT 63

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
           + +   +  LY TL PC MC+ AI L  I ++  G
Sbjct: 64  AAD-YQKATLYSTLSPCDMCSGAILLYGIPKVVVG 97


>gi|88809683|ref|ZP_01125190.1| hypothetical protein WH7805_00725 [Synechococcus sp. WH 7805]
 gi|88786433|gb|EAR17593.1| hypothetical protein WH7805_00725 [Synechococcus sp. WH 7805]
          Length = 159

 Score = 58.5 bits (140), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 30/79 (37%), Positives = 43/79 (54%)

Query: 25  PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84
           P GAV   + K++S +GN      D +AHAE+ AIR  C+ L    L    +Y + E C 
Sbjct: 29  PFGAVIAKDGKVVSASGNSVVRDLDPSAHAEVNAIRAACKALGTWDLTGCVMYTSCECCP 88

Query: 85  MCAAAISLARIRRLYYGAS 103
           MC A    A IR+++Y A+
Sbjct: 89  MCYATAYWAGIRKVFYAAA 107


>gi|148508325|gb|ABQ76108.1| cytosine/adenosine deaminases [uncultured haloarchaeon]
          Length = 153

 Score = 58.5 bits (140), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 39/150 (26%), Positives = 66/150 (44%), Gaps = 13/150 (8%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           +     M+ A+E A+ AA R + P G+V V ++ I+ R  NR     D+  H E+     
Sbjct: 8   RSHEAHMTEAIELAREAADRGDDPFGSVLVRDDTIVMRESNREHTESDIRRHPELHLAYR 67

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
            C+  S +    + +Y + EPC MCA  ++ A    + Y        G +   QF    +
Sbjct: 68  ACQAYSPQERAMMAMYTSTEPCPMCAGGMTTAHFGSVIYSV------GTDELAQFIGSQS 121

Query: 122 CHHSPEIYPGISE-------QRSRQIIQDF 144
              + +I  G++E          R+I Q+F
Sbjct: 122 PVRAEDILSGVTEVHGPVLNDDGRRIHQEF 151


>gi|114048372|ref|YP_738922.1| cytosine deaminase [Shewanella sp. MR-7]
 gi|113889814|gb|ABI43865.1| Cytosine deaminase [Shewanella sp. MR-7]
          Length = 145

 Score = 58.5 bits (140), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 30/95 (31%), Positives = 51/95 (53%), Gaps = 1/95 (1%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           F+  A++EA+       IP+G+V V++ KI++R  N+  +      HAE+  +    R+ 
Sbjct: 4   FLQAAIDEAKQGLAEGGIPIGSVLVIDGKIVARGHNKRVQQGSAVLHAEMDCLENAGRLT 63

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
           + +   +  LY TL PC MC+ AI L  I ++  G
Sbjct: 64  AAD-YQKATLYSTLSPCDMCSGAILLYGIPKVVVG 97


>gi|282880633|ref|ZP_06289339.1| guanine deaminase [Prevotella timonensis CRIS 5C-B1]
 gi|281305528|gb|EFA97582.1| guanine deaminase [Prevotella timonensis CRIS 5C-B1]
          Length = 156

 Score = 58.5 bits (140), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 37/99 (37%), Positives = 50/99 (50%), Gaps = 1/99 (1%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  A+  ++ + L    P GAV      II+ A N      D TAHAE+ AIR   + L 
Sbjct: 8   MRRAIALSEESVLSGGGPFGAVIAKGGNIIAEASNTVTIDHDPTAHAEVNAIRKATQKLG 67

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPK 106
              L   D+Y + EPC MC  AI  A + R++Y A+N K
Sbjct: 68  TFDLTGCDIYTSCEPCPMCLGAIYWAHLDRIFY-ANNRK 105


>gi|307154712|ref|YP_003890096.1| CMP/dCMP deaminase zinc-binding protein [Cyanothece sp. PCC 7822]
 gi|306984940|gb|ADN16821.1| CMP/dCMP deaminase zinc-binding protein [Cyanothece sp. PCC 7822]
          Length = 147

 Score = 58.5 bits (140), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 34/97 (35%), Positives = 49/97 (50%), Gaps = 3/97 (3%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  A+ EA+       IP+G+V V + +I+ R  N+  +  D   HAEI  +R   RI 
Sbjct: 8   FMQAAIAEAKQGLQEGGIPIGSVLVKDGQIVGRGHNKRVQDNDPVTHAEIDCLRNAGRIG 67

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
                 +  LY TL PC +CA A+    I+R+  G S
Sbjct: 68  Q---YGDSILYSTLMPCYLCAGAVVQFGIKRVIAGES 101


>gi|331703065|ref|YP_004399752.1| cytosine deaminase [Mycoplasma mycoides subsp. capri LC str. 95010]
 gi|328801620|emb|CBW53773.1| Cytosine deaminase [Mycoplasma mycoides subsp. capri LC str. 95010]
          Length = 147

 Score = 58.5 bits (140), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 36/109 (33%), Positives = 55/109 (50%), Gaps = 1/109 (0%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNK-IISRAGNRNRELKDVTAHAEILAI 59
           M   N  +   + +++ A   N+IPV    + NN  I++ + N   + K+++ HAEI AI
Sbjct: 1   MNDFNNILDLMIYQSKKAIKHNDIPVCCCIIDNNNNILTISINTRYKNKNISQHAEINAI 60

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGG 108
                 L+   L E  L  TLEPC MC +AI   +I  +YY   + K G
Sbjct: 61  NKLINKLNTFNLSEYKLITTLEPCMMCYSAIKQVKINTIYYLVDSYKFG 109


>gi|268574528|ref|XP_002642242.1| Hypothetical protein CBG18226 [Caenorhabditis briggsae]
 gi|187025244|emb|CAP35711.1| hypothetical protein CBG_18226 [Caenorhabditis briggsae AF16]
          Length = 168

 Score = 58.5 bits (140), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 32/80 (40%), Positives = 41/80 (51%), Gaps = 1/80 (1%)

Query: 25  PVGAVAVLNN-KIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83
           P GAV V N   ++++  N     KD T HAE+ AIR  C+ L    L    LY +  PC
Sbjct: 36  PFGAVIVDNKGNVVAKGHNMVLVTKDPTMHAEMTAIRNACKTLGTFDLSGHTLYTSCYPC 95

Query: 84  TMCAAAISLARIRRLYYGAS 103
            MC  A   AR   +YYGA+
Sbjct: 96  PMCMGASLWARFDAIYYGAT 115


>gi|148555831|ref|YP_001263413.1| CMP/dCMP deaminase, zinc-binding [Sphingomonas wittichii RW1]
 gi|148501021|gb|ABQ69275.1| CMP/dCMP deaminase, zinc-binding [Sphingomonas wittichii RW1]
          Length = 163

 Score = 58.5 bits (140), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 36/101 (35%), Positives = 50/101 (49%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           F+  A+E A++   +   P GAV V +  I++   N      D TAHAE+ AIR   R L
Sbjct: 10  FLRAAIELARDNVAQGGRPFGAVVVKDGAIVAVGVNEILATNDPTAHAELGAIRAAGRRL 69

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKG 107
               L    +Y +  PC MC AA+ +A I  + Y  SN  G
Sbjct: 70  GSPDLSGCTVYASGHPCPMCMAAMRMAGIGAVAYAYSNEDG 110


>gi|56965577|ref|YP_177311.1| guanine deaminase [Bacillus clausii KSM-K16]
 gi|56911823|dbj|BAD66350.1| guanine deaminase [Bacillus clausii KSM-K16]
          Length = 156

 Score = 58.5 bits (140), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 31/87 (35%), Positives = 43/87 (49%), Gaps = 1/87 (1%)

Query: 25  PVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83
           P  A+ V  N  II +  N      D TAHAE++AIR  C  ++   L    LY + EPC
Sbjct: 24  PFAAIIVDPNGAIIGQGTNSVTNDNDPTAHAEVVAIRDACNTINDFQLEGCTLYTSCEPC 83

Query: 84  TMCAAAISLARIRRLYYGASNPKGGGI 110
            MC  AI  AR + +Y+ A+      +
Sbjct: 84  PMCLGAIYWARPKAVYFAATQEDAAAV 110


>gi|288925498|ref|ZP_06419431.1| guanine deaminase [Prevotella buccae D17]
 gi|315606630|ref|ZP_07881641.1| guanine deaminase [Prevotella buccae ATCC 33574]
 gi|288337714|gb|EFC76067.1| guanine deaminase [Prevotella buccae D17]
 gi|315251640|gb|EFU31618.1| guanine deaminase [Prevotella buccae ATCC 33574]
          Length = 155

 Score = 58.5 bits (140), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 32/92 (34%), Positives = 42/92 (45%)

Query: 25  PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84
           P GAV   N +I++ A N      D TAHAE+ AIR     L    L   ++Y + EPC 
Sbjct: 24  PFGAVIARNGEIVAEASNSVTIDHDPTAHAEVNAIRKATSKLQNFDLEGCEIYTSCEPCP 83

Query: 85  MCAAAISLARIRRLYYGASNPKGGGIENGTQF 116
           MC  AI  A + ++YY         I     F
Sbjct: 84  MCLGAIYWAHLDKIYYANDRKDAAKIGFDDDF 115


>gi|254458782|ref|ZP_05072206.1| cytosine deaminase [Campylobacterales bacterium GD 1]
 gi|207084548|gb|EDZ61836.1| cytosine deaminase [Campylobacterales bacterium GD 1]
          Length = 145

 Score = 58.5 bits (140), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 31/97 (31%), Positives = 52/97 (53%), Gaps = 1/97 (1%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           ++F+  A++EA+       IP+G+V V++ KI+ R  NR  +      HAE+  +    R
Sbjct: 2   DIFLEEAIKEAKKGLSEGGIPIGSVLVIDGKIVGRGHNRRVQNSSAILHAEMDCLENAGR 61

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
           + + +      +Y TL PC MC+ AI L  I+R+  G
Sbjct: 62  LKAID-YKRATIYSTLSPCDMCSGAILLYGIKRVIIG 97


>gi|183597629|ref|ZP_02959122.1| hypothetical protein PROSTU_00918 [Providencia stuartii ATCC 25827]
 gi|188022897|gb|EDU60937.1| hypothetical protein PROSTU_00918 [Providencia stuartii ATCC 25827]
          Length = 157

 Score = 58.2 bits (139), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 37/127 (29%), Positives = 60/127 (47%), Gaps = 6/127 (4%)

Query: 25  PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84
           P GAV V +N+++    N      D T HAE+  IR  C       L E  LY + EPC 
Sbjct: 29  PFGAVLVKDNQVVMTGENHIHTESDPTYHAELGLIRQYCSEHKIMNLSEYTLYTSCEPCC 88

Query: 85  MCAAAISLARIRRLYYGASNPK-----GGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139
           MC+ A+  +++ R+ Y  S+ +     G  I  G+     A     PE+  G+ ++++  
Sbjct: 89  MCSGAMVWSQLGRMVYSLSHDELAEIAGFNIMLGSD-EIFAKSPFKPEVTHGVLKEKAML 147

Query: 140 IIQDFFK 146
           I   +F+
Sbjct: 148 IYTQYFQ 154


>gi|126175278|ref|YP_001051427.1| cytosine deaminase [Shewanella baltica OS155]
 gi|125998483|gb|ABN62558.1| Cytosine deaminase [Shewanella baltica OS155]
          Length = 145

 Score = 58.2 bits (139), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 31/95 (32%), Positives = 49/95 (51%), Gaps = 1/95 (1%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           F++ A+EEA+       IP+G+V V++ KI+ R  N+  +      HAE+  +    R  
Sbjct: 4   FLAAAIEEAKQGLAEGGIPIGSVLVIDGKIVGRGHNKRVQKGSSVLHAEMDCLENAGRFS 63

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
           + E      LY TL PC MC+ A+ L  I ++  G
Sbjct: 64  AAE-YQRATLYSTLSPCDMCSGAVLLYGIPKVIVG 97


>gi|111145470|gb|ABH06955.1| cytidine/deoxycytidylate deaminase family protein [Desulfovibrio
           vulgaris]
          Length = 88

 Score = 58.2 bits (139), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 28/74 (37%), Positives = 40/74 (54%)

Query: 76  LYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQ 135
           L  TLEPC MCA AI  AR+  + YGA +PK G + +  + +     +H P    G+  +
Sbjct: 13  LVXTLEPCLMCAGAIVHARVEGVVYGAEDPKAGAVTSCLEAFEQPFLNHRPWHMGGVRRR 72

Query: 136 RSRQIIQDFFKERR 149
               I++DFF  RR
Sbjct: 73  ACTAILKDFFNGRR 86


>gi|304410115|ref|ZP_07391734.1| Cytosine deaminase [Shewanella baltica OS183]
 gi|307302173|ref|ZP_07581931.1| Cytosine deaminase [Shewanella baltica BA175]
 gi|304351524|gb|EFM15923.1| Cytosine deaminase [Shewanella baltica OS183]
 gi|306914211|gb|EFN44632.1| Cytosine deaminase [Shewanella baltica BA175]
          Length = 145

 Score = 58.2 bits (139), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 31/95 (32%), Positives = 49/95 (51%), Gaps = 1/95 (1%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           F++ A+EEA+       IP+G+V V++ KI+ R  N+  +      HAE+  +    R  
Sbjct: 4   FLAAAIEEAKQGLAEGGIPIGSVLVIDGKIVGRGHNKRVQKGSSVLHAEMDCLENAGRFS 63

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
           + E      LY TL PC MC+ A+ L  I ++  G
Sbjct: 64  AAE-YQRATLYSTLSPCDMCSGAVLLYGIPKVIVG 97


>gi|163852551|ref|YP_001640594.1| CMP/dCMP deaminase zinc-binding [Methylobacterium extorquens PA1]
 gi|163664156|gb|ABY31523.1| CMP/dCMP deaminase zinc-binding [Methylobacterium extorquens PA1]
          Length = 153

 Score = 58.2 bits (139), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 35/92 (38%), Positives = 51/92 (55%), Gaps = 4/92 (4%)

Query: 12 LEEAQNAALRNEI----PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
          L EA   AL N      P GAV V + ++I+RA NR     D + HAE++AIR   + L 
Sbjct: 8  LREATELALANVAEGGRPYGAVIVRDGEVIARAANRIHATNDPSDHAEMVAIRAASQQLG 67

Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLY 99
          +  L +  +Y +  PC MC AA+ LA +++ Y
Sbjct: 68 RPKLDDCIVYASGRPCPMCHAAMRLAGVKQGY 99


>gi|32475570|ref|NP_868564.1| cytosine deaminase [Rhodopirellula baltica SH 1]
 gi|32446112|emb|CAD75941.1| cytosine deaminase [Rhodopirellula baltica SH 1]
          Length = 187

 Score = 58.2 bits (139), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 33/95 (34%), Positives = 51/95 (53%), Gaps = 1/95 (1%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           F+  AL EA+     + IP+G+V V++N+I+SR  NR  +      HAE+  +    R+ 
Sbjct: 42  FLQAALNEARLGLNEHGIPIGSVLVIDNEIVSRGHNRRIQNGSSILHAEMDCLERAGRLT 101

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
           + +      LY TL PC MC+ A  L +I R+  G
Sbjct: 102 AND-YSRSTLYSTLSPCDMCSGAALLYKIPRIIVG 135


>gi|189219256|ref|YP_001939897.1| Cytosine/adenosine deaminase [Methylacidiphilum infernorum V4]
 gi|189186114|gb|ACD83299.1| Cytosine/adenosine deaminase [Methylacidiphilum infernorum V4]
          Length = 146

 Score = 58.2 bits (139), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 37/117 (31%), Positives = 56/117 (47%), Gaps = 5/117 (4%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           F   A EEA+       IP+GA     ++++ R  NR  +L  V  H E+  +    R  
Sbjct: 4   FWHIAFEEAKIGFEEGGIPIGACLAYKDRVLGRGRNRRVQLGSVIKHGELDCLE-NARRY 62

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS----NPKGGGIENGTQFYTL 119
           + +I  E  LY TL PC MC+ AI L  I+++  G +     P+   I+NG +   L
Sbjct: 63  TAKIYREAILYTTLSPCWMCSGAILLYGIKKVVIGENRNFKGPEEILIQNGVEIIHL 119


>gi|126323601|ref|XP_001371730.1| PREDICTED: similar to hCG22695, [Monodelphis domestica]
          Length = 538

 Score = 58.2 bits (139), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 26/69 (37%), Positives = 43/69 (62%), Gaps = 1/69 (1%)

Query: 75  DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISE 134
           +LY+T EPC MCA A+  +RI+R++YG ++P  G +    + +T    +H  E++ GI E
Sbjct: 470 ELYITSEPCVMCAMALVHSRIQRVFYGIASPD-GALGTKYKIHTRQDLNHRFEVFRGILE 528

Query: 135 QRSRQIIQD 143
            R   +I+D
Sbjct: 529 DRCYSLIKD 537


>gi|239820133|ref|YP_002947318.1| CMP/dCMP deaminase zinc-binding [Variovorax paradoxus S110]
 gi|239804986|gb|ACS22052.1| CMP/dCMP deaminase zinc-binding [Variovorax paradoxus S110]
          Length = 158

 Score = 58.2 bits (139), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 34/92 (36%), Positives = 47/92 (51%)

Query: 16  QNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVD 75
           +N   R   P GAV V   K+++RA N    L D TAHAE+ A+RM  +      L    
Sbjct: 21  RNVRERRTWPFGAVLVREGKVLARAVNEVDALCDPTAHAEMQAVRMAAKAQGGTDLSGSV 80

Query: 76  LYVTLEPCTMCAAAISLARIRRLYYGASNPKG 107
           +Y +  PC MC  A+ LA ++ + Y  SN  G
Sbjct: 81  VYASGYPCPMCLTAMFLAGVKEVCYAYSNEDG 112


>gi|17555996|ref|NP_499418.1| hypothetical protein Y48A6B.7 [Caenorhabditis elegans]
 gi|3881060|emb|CAA19531.1| C. elegans protein Y48A6B.7, confirmed by transcript evidence
           [Caenorhabditis elegans]
          Length = 168

 Score = 58.2 bits (139), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 31/80 (38%), Positives = 42/80 (52%), Gaps = 1/80 (1%)

Query: 25  PVGAVAVLNN-KIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83
           P GAV V +N K++++  N     KD T HAE+ AI+  C+ L    L    LY +  PC
Sbjct: 36  PFGAVVVDSNGKVVAKGHNMVLVTKDPTMHAEMTAIKNACKALGTFDLSGHILYTSCYPC 95

Query: 84  TMCAAAISLARIRRLYYGAS 103
            MC      AR   +YYGA+
Sbjct: 96  PMCMGGCLWARFDAIYYGAT 115


>gi|294953511|ref|XP_002787800.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
 gi|239902824|gb|EER19596.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
          Length = 319

 Score = 58.2 bits (139), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 37/114 (32%), Positives = 54/114 (47%), Gaps = 3/114 (2%)

Query: 7   FMSCALEEAQNAA-LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           FM  A+  A     L+   P GA    N+ ++  A N     +D T HAE+ AIRM   +
Sbjct: 37  FMEAAVLSATTGVKLKEGGPFGACITRNDVVVCCAHNTFFSDRDPTCHAEMNAIRMAMHL 96

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
           L  + L    +Y + EPC MC  AI  + IR LY G    +    +NG ++ + 
Sbjct: 97  LKTDDLAGCVIYSSFEPCPMCWGAILASGIRLLYVGLD--RHTAAKNGVEYLSF 148


>gi|307544360|ref|YP_003896839.1| cytosine deaminase [Halomonas elongata DSM 2581]
 gi|307216384|emb|CBV41654.1| cytosine deaminase [Halomonas elongata DSM 2581]
          Length = 152

 Score = 58.2 bits (139), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 36/95 (37%), Positives = 46/95 (48%), Gaps = 1/95 (1%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  AL+EA+       IP+G+V V    I+    NR  +L     H E+ A+    R  
Sbjct: 4   FMQAALDEARAGLDEGGIPIGSVLVHRGVILGGGRNRRVQLGSTVLHGEMDALENAGR-Q 62

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
           S +I  E  LY TL PC MC  AI L  I R+  G
Sbjct: 63  SADIYRESTLYTTLSPCAMCTGAILLYGIPRVVIG 97


>gi|296273637|ref|YP_003656268.1| cytosine deaminase [Arcobacter nitrofigilis DSM 7299]
 gi|296097811|gb|ADG93761.1| Cytosine deaminase [Arcobacter nitrofigilis DSM 7299]
          Length = 145

 Score = 58.2 bits (139), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 31/95 (32%), Positives = 49/95 (51%), Gaps = 1/95 (1%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           F+  A++EA+       IP+G+V V+++KI+ R  NR  +      HAE+  +    RI 
Sbjct: 4   FLQAAIDEAKKGIDEGGIPIGSVLVIDDKIVGRGHNRRVQNGSAVLHAEMDCLENAGRIK 63

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
           + +      LY TL PC MC+ A+ L  I  +  G
Sbjct: 64  ASD-YKRATLYSTLSPCDMCSGAVLLYGIPNVVIG 97


>gi|149174160|ref|ZP_01852788.1| Cytosine deaminase [Planctomyces maris DSM 8797]
 gi|148847140|gb|EDL61475.1| Cytosine deaminase [Planctomyces maris DSM 8797]
          Length = 145

 Score = 58.2 bits (139), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 33/99 (33%), Positives = 49/99 (49%), Gaps = 9/99 (9%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI----RMG 62
           FM  A+EEA+       +P+G+V V   KII R  N+ ++      H E+ A+    R  
Sbjct: 4   FMQAAIEEAEKGRDAGGVPIGSVLVYEGKIIGRGHNQRQQKGSAILHGEMSALEDAGRQP 63

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
            R+    +     +Y TL PC MC+ AI L +I R+  G
Sbjct: 64  ARVYRNSV-----IYTTLSPCPMCSGAIRLYQIPRVVIG 97


>gi|146292307|ref|YP_001182731.1| cytosine deaminase [Shewanella putrefaciens CN-32]
 gi|145563997|gb|ABP74932.1| Cytosine deaminase [Shewanella putrefaciens CN-32]
          Length = 145

 Score = 58.2 bits (139), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 32/95 (33%), Positives = 50/95 (52%), Gaps = 1/95 (1%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           F+  A++EA+       IP+G+V V++ KI++R  N+  +      HAE+  +    R L
Sbjct: 4   FLQAAIDEAKQGLAEGGIPIGSVLVIDGKIVARGHNKRVQQGSAVLHAEMDCLENAGR-L 62

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
           S     +  LY TL PC MC+ AI L  I ++  G
Sbjct: 63  SAADYQKGTLYSTLSPCDMCSGAILLYGIPKVVVG 97


>gi|152971270|ref|YP_001336379.1| putative adenosine deaminase [Klebsiella pneumoniae subsp.
           pneumoniae MGH 78578]
 gi|330013669|ref|ZP_08307752.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Klebsiella sp. MS 92-3]
 gi|150956119|gb|ABR78149.1| putative adenosine deaminase [Klebsiella pneumoniae subsp.
           pneumoniae MGH 78578]
 gi|328533404|gb|EGF60142.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Klebsiella sp. MS 92-3]
          Length = 152

 Score = 58.2 bits (139), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 30/83 (36%), Positives = 47/83 (56%)

Query: 25  PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84
           P GAV V N++I++ + N      D TAHAE+ A+R     L   +L E  +Y + +PC 
Sbjct: 25  PFGAVLVRNDEIVAESVNTFHLSGDPTAHAELNAVRDLAARLGSAVLRECVIYASGQPCP 84

Query: 85  MCAAAISLARIRRLYYGASNPKG 107
           MC +A+ L  +R +++  SN  G
Sbjct: 85  MCLSALYLTGVREVFFANSNQDG 107


>gi|206562263|ref|YP_002233026.1| guanine deaminase [Burkholderia cenocepacia J2315]
 gi|198038303|emb|CAR54258.1| guanine deaminase [Burkholderia cenocepacia J2315]
          Length = 155

 Score = 58.2 bits (139), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 27/76 (35%), Positives = 42/76 (55%)

Query: 25  PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84
           P   V V + +I++ + N   +  D TAHAEILA+R  CR L  E L + ++Y+   PC 
Sbjct: 21  PFATVIVRDGEIVAESPNLVAQTSDPTAHAEILAVRDACRTLGTEHLTDCEIYILASPCP 80

Query: 85  MCAAAISLARIRRLYY 100
           MC  ++     +R+ Y
Sbjct: 81  MCLGSLYYCSPKRVIY 96


>gi|289208092|ref|YP_003460158.1| CMP/dCMP deaminase zinc-binding protein [Thioalkalivibrio sp.
           K90mix]
 gi|288943723|gb|ADC71422.1| CMP/dCMP deaminase zinc-binding protein [Thioalkalivibrio sp.
           K90mix]
          Length = 146

 Score = 57.8 bits (138), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 34/97 (35%), Positives = 47/97 (48%), Gaps = 1/97 (1%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           N F+  AL+EA+       IP+G+V     +I+ R  NR  +      HAE+ A+    R
Sbjct: 2   NPFLEAALDEARTGWDEGGIPIGSVIEHGGRIVGRGHNRRVQSGSAILHAEMDALENAGR 61

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
                +  E  LY TL PC MC+ AI L  I R+  G
Sbjct: 62  -QPASVYRECTLYTTLSPCAMCSGAIVLYGIPRVVVG 97


>gi|326203162|ref|ZP_08193028.1| CMP/dCMP deaminase zinc-binding [Clostridium papyrosolvens DSM
           2782]
 gi|325986808|gb|EGD47638.1| CMP/dCMP deaminase zinc-binding [Clostridium papyrosolvens DSM
           2782]
          Length = 137

 Score = 57.8 bits (138), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 47/91 (51%), Gaps = 2/91 (2%)

Query: 27  GAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPE-VDLYVTLEPCTM 85
            AV      I+S+     R+  D TAHAEI AIR  C+ L  ++LP+   LY T EPC +
Sbjct: 16  AAVIDAEGNIVSKGKTTVRDDHDPTAHAEINAIRSACKRLKVDVLPKGYWLYSTFEPCPL 75

Query: 86  CAAAISLARIRRLYYGASNPKGGGIENGTQF 116
           CAAAI  A    + Y A+N    G E    F
Sbjct: 76  CAAAIIWAGFEGVVY-ANNADHRGKEINWSF 105


>gi|325528019|gb|EGD05243.1| cytidine/deoxycytidylate deaminase [Burkholderia sp. TJI49]
          Length = 155

 Score = 57.8 bits (138), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 27/76 (35%), Positives = 43/76 (56%)

Query: 25  PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84
           P   V V + +I++ + N   + +D TAHAEILA+R  CR L  E L + ++Y+   PC 
Sbjct: 21  PFATVIVRDGEIVAESPNLVAQTRDPTAHAEILAVRDACRRLGTEHLTDCEIYILASPCP 80

Query: 85  MCAAAISLARIRRLYY 100
           MC  ++     +R+ Y
Sbjct: 81  MCLGSLYYCSPKRVVY 96


>gi|298293557|ref|YP_003695496.1| CMP/dCMP deaminase zinc-binding protein [Starkeya novella DSM 506]
 gi|296930068|gb|ADH90877.1| CMP/dCMP deaminase zinc-binding protein [Starkeya novella DSM 506]
          Length = 158

 Score = 57.8 bits (138), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 30/77 (38%), Positives = 39/77 (50%)

Query: 25  PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84
           P G V V +  I+    N      D T+H E+ AIR   R L    L   +LY T EPC 
Sbjct: 26  PFGCVIVKDGVIVGEGVNNVVNNHDATSHGEVEAIRDAGRRLKSWDLSGCELYTTCEPCE 85

Query: 85  MCAAAISLARIRRLYYG 101
           MC A++  A+I R+YY 
Sbjct: 86  MCVASMFWAKISRMYYA 102


>gi|238895863|ref|YP_002920599.1| putative adenosine deaminase [Klebsiella pneumoniae NTUH-K2044]
 gi|238548181|dbj|BAH64532.1| putative adenosine deaminase [Klebsiella pneumoniae subsp.
           pneumoniae NTUH-K2044]
          Length = 154

 Score = 57.8 bits (138), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 30/83 (36%), Positives = 47/83 (56%)

Query: 25  PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84
           P GAV V N++I++ + N      D TAHAE+ A+R     L   +L E  +Y + +PC 
Sbjct: 27  PFGAVLVRNDEIVAESVNTFHLSGDPTAHAELNAVRDLAARLGSAVLRECVIYASGQPCP 86

Query: 85  MCAAAISLARIRRLYYGASNPKG 107
           MC +A+ L  +R +++  SN  G
Sbjct: 87  MCLSALYLTGVREVFFANSNQDG 109


>gi|39970877|ref|XP_366829.1| hypothetical protein MGG_02905 [Magnaporthe oryzae 70-15]
 gi|149210385|ref|XP_001522567.1| hypothetical protein MGCH7_ch7g670 [Magnaporthe oryzae 70-15]
 gi|86196625|gb|EAQ71263.1| hypothetical protein MGCH7_ch7g670 [Magnaporthe oryzae 70-15]
 gi|145017270|gb|EDK01633.1| hypothetical protein MGG_02905 [Magnaporthe oryzae 70-15]
          Length = 593

 Score = 57.8 bits (138), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 41/147 (27%), Positives = 63/147 (42%), Gaps = 44/147 (29%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM----- 61
           F+  AL+ A+ A   NE PVG V V   ++I+R  N     ++ T HAE +A+       
Sbjct: 212 FIEEALDMARLALKTNETPVGCVLVYRGRVIARGMNATNITRNGTRHAEYMALSSLFGTK 271

Query: 62  ---------GCRI------------------------------LSQEILPEVDLYVTLEP 82
                     C+                               ++  I+ E  LYVT+EP
Sbjct: 272 PDAPPPSHPSCKHEVDDPGEWDAVDVTKSYLYPYGQKLHPSPHVTASIVQESTLYVTVEP 331

Query: 83  CTMCAAAISLARIRRLYYGASNPKGGG 109
           C MCA+ +   +I+++Y+GA N K GG
Sbjct: 332 CVMCASLLKQLKIKKVYFGAVNDKFGG 358


>gi|94312654|ref|YP_585863.1| CMP/dCMP deaminase [Cupriavidus metallidurans CH34]
 gi|93356506|gb|ABF10594.1| CMP/dCMP deaminase [Cupriavidus metallidurans CH34]
          Length = 156

 Score = 57.8 bits (138), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 33/101 (32%), Positives = 52/101 (51%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           ++  A+E A+    +   P GAV V + ++I+   N+     D TAHAE+ AIR   + L
Sbjct: 9   YLGEAIELARTNLEQGGRPFGAVIVKDGEVIATGVNQILSTNDPTAHAELTAIRAASQKL 68

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKG 107
               L    +Y +  PC MC AA+ +A ++ + Y  SN  G
Sbjct: 69  GSPSLDGCAVYASGHPCPMCMAAMRMAGVKEVTYAYSNDDG 109


>gi|19076024|ref|NP_588524.1| cytosine deaminase (predicted) [Schizosaccharomyces pombe 972h-]
 gi|74626752|sp|O59834|FCYS_SCHPO RecName: Full=Probable cytosine deaminase; AltName: Full=Cytosine
           aminohydrolase
 gi|3136043|emb|CAA19074.1| cytosine deaminase (predicted) [Schizosaccharomyces pombe]
          Length = 162

 Score = 57.8 bits (138), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 37/104 (35%), Positives = 57/104 (54%), Gaps = 4/104 (3%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIR 60
           +K   ++  A++ +Q A    + P G + V  N+ +I  AGNR  +  DVT HAE  A+ 
Sbjct: 8   EKDLAYLREAIKVSQQARDEGQHPFGCIIVDENDNVIMSAGNRVPD-GDVTQHAETRAV- 65

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASN 104
            G    ++  L +  LY + EPC MC+ AI  + IRR+ +G SN
Sbjct: 66  -GLITKTRRDLEKCTLYTSTEPCAMCSGAIFWSGIRRMIFGLSN 108


>gi|91215299|ref|ZP_01252271.1| hypothetical protein P700755_13417 [Psychroflexus torquis ATCC
           700755]
 gi|91186904|gb|EAS73275.1| hypothetical protein P700755_13417 [Psychroflexus torquis ATCC
           700755]
          Length = 149

 Score = 57.8 bits (138), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 33/95 (34%), Positives = 45/95 (47%), Gaps = 2/95 (2%)

Query: 25  PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84
             GAV V    II+   N+     D T HAE+  ++  CR L  + L    LY + EPC 
Sbjct: 28  AFGAVIVKEGHIIAEGHNQVGSKTDCTQHAELAMVQEACRKLKSKSLKGCVLYTSCEPCL 87

Query: 85  MCAAAISLARIRRLYYGAS--NPKGGGIENGTQFY 117
           MC  A   A + +++YGAS  + K  G      FY
Sbjct: 88  MCLGATRWADLDQVFYGASADDAKEAGYIYSDLFY 122


>gi|269859573|ref|XP_002649511.1| tRNA-specific adenosine deaminase [Enterocytozoon bieneusi H348]
 gi|220067062|gb|EED44530.1| tRNA-specific adenosine deaminase [Enterocytozoon bieneusi H348]
          Length = 159

 Score = 57.8 bits (138), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 31/83 (37%), Positives = 42/83 (50%), Gaps = 7/83 (8%)

Query: 8  MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR----MGC 63
           + A   A  A ++NE+PVG    +N  I     NR  + KD  AH E LAI     +  
Sbjct: 5  FNVAFNAANQARIKNELPVGCAVFINGVIFCTEHNRTNQYKDPLAHCEFLAINYLKSVDL 64

Query: 64 RILSQEILPEVDLYVTLEPCTMC 86
          RIL+   +   + Y+TLEPC MC
Sbjct: 65 RILN---IHSCEFYITLEPCVMC 84


>gi|8778532|gb|AAF79540.1|AC023673_28 F21D18.9 [Arabidopsis thaliana]
          Length = 331

 Score = 57.8 bits (138), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 34/94 (36%), Positives = 49/94 (52%), Gaps = 15/94 (15%)

Query: 28  AVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQ------------EILPEVD 75
            V + + K+I+   NR  E ++ T HAE+ AI    +++ Q            E   +  
Sbjct: 183 CVFLEDGKVIASGRNRTNETRNATRHAEMEAID---QLVGQWQKDGLSPSQVAEKFSKCV 239

Query: 76  LYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109
           LYVT EPC MCA+A+S   I+ +YYG  N K GG
Sbjct: 240 LYVTCEPCIMCASALSFLGIKEVYYGCPNDKFGG 273


>gi|254562307|ref|YP_003069402.1| Guanine deaminase [Methylobacterium extorquens DM4]
 gi|254269585|emb|CAX25555.1| Guanine deaminase (Guanase) (Guanine aminase) (Guanine
          aminohydrolase) (GAH) (GDEase) [Methylobacterium
          extorquens DM4]
          Length = 153

 Score = 57.8 bits (138), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 34/92 (36%), Positives = 51/92 (55%), Gaps = 4/92 (4%)

Query: 12 LEEAQNAALRNEI----PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
          L EA   AL N      P GAV V + ++++RA NR     D + HAE++AIR   + L 
Sbjct: 8  LREATEIALANVAEGGRPYGAVIVRDGEVVARAANRIHATNDPSDHAEMVAIRAASQQLG 67

Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLY 99
          +  L +  +Y +  PC MC AA+ LA +++ Y
Sbjct: 68 RPKLDDCIVYASGRPCPMCHAAMRLAGVKQGY 99


>gi|91773185|ref|YP_565877.1| CMP/dCMP deaminase, zinc-binding [Methanococcoides burtonii DSM
           6242]
 gi|91712200|gb|ABE52127.1| Cytosine deaminase [Methanococcoides burtonii DSM 6242]
          Length = 143

 Score = 57.8 bits (138), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 36/105 (34%), Positives = 54/105 (51%), Gaps = 3/105 (2%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  A++EA++      IP+G+V V ++ II +  N   +  D  AHAEI  +R   R+ 
Sbjct: 4   FMQVAIDEARSGLNSGGIPIGSVLVRDDLIIGKGHNLRVQQDDPMAHAEISCLRDAGRVG 63

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIE 111
           S     +  LY TL PC +CA A+    I+++  G S    G  E
Sbjct: 64  SYR---DSILYSTLMPCYLCAGAVVQFGIKKVIVGESRTFSGARE 105


>gi|71652572|ref|XP_814939.1| deaminase [Trypanosoma cruzi strain CL Brener]
 gi|70879957|gb|EAN93088.1| deaminase, putative [Trypanosoma cruzi]
          Length = 202

 Score = 57.8 bits (138), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 39/125 (31%), Positives = 60/125 (48%), Gaps = 11/125 (8%)

Query: 30  AVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQE------ILPEVDLYVTLEPC 83
           A L + I +R  N   +     AHAE +A+    R  +++       L    LYV +EPC
Sbjct: 63  ASLGSLIAARGRNATNKEHHALAHAEFVAVEALLRDAAEKGRKPPASLAGYVLYVVVEPC 122

Query: 84  TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ---I 140
            MCAA +   RI+++Y+G  NP+ GG  NGT     A    S   Y      R+ +   +
Sbjct: 123 IMCAAMLLYNRIKKVYFGCGNPRFGG--NGTVLAVHAAKSTSAPAYESCGGHRAEEAIAL 180

Query: 141 IQDFF 145
           +Q+F+
Sbjct: 181 LQEFY 185


>gi|255693462|ref|ZP_05417137.1| guanine deaminase [Bacteroides finegoldii DSM 17565]
 gi|260620746|gb|EEX43617.1| guanine deaminase [Bacteroides finegoldii DSM 17565]
          Length = 156

 Score = 57.8 bits (138), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 32/78 (41%), Positives = 42/78 (53%), Gaps = 1/78 (1%)

Query: 25  PVGAV-AVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83
           P GAV A    +I++   NR     D TAHAE+ AIR     L    L   ++Y + EPC
Sbjct: 24  PFGAVIATKEGEIVATGVNRVTASCDPTAHAEVSAIRAAAAKLGTFNLSGYEIYTSCEPC 83

Query: 84  TMCAAAISLARIRRLYYG 101
            MC  AI  AR+ ++YYG
Sbjct: 84  PMCLGAIYWARLDKMYYG 101


>gi|300856157|ref|YP_003781141.1| putative purine deaminase, zinc-binding domain [Clostridium
           ljungdahlii DSM 13528]
 gi|300436272|gb|ADK16039.1| putative purine deaminase, zinc-binding domain [Clostridium
           ljungdahlii DSM 13528]
          Length = 163

 Score = 57.8 bits (138), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 33/98 (33%), Positives = 47/98 (47%), Gaps = 1/98 (1%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           ++  A E A+N+      P GA+ V  +  I+    N      D T HAE   +R   + 
Sbjct: 9   YLRRANEIAKNSREHGNTPFGALLVDKDGNILLEQENIEISTGDCTGHAEASLMRRASQK 68

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
            S+E L E  LY T EPC MC+ AI    +R + YG +
Sbjct: 69  YSKEFLAECTLYTTFEPCVMCSGAIYWGNVRTVVYGLT 106


>gi|240139885|ref|YP_002964362.1| Guanine deaminase (Guanase) (Guanine aminase) (Guanine
          aminohydrolase) (GAH) (GDEase) [Methylobacterium
          extorquens AM1]
 gi|240009859|gb|ACS41085.1| Guanine deaminase (Guanase) (Guanine aminase) (Guanine
          aminohydrolase) (GAH) (GDEase) [Methylobacterium
          extorquens AM1]
          Length = 153

 Score = 57.8 bits (138), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 34/92 (36%), Positives = 51/92 (55%), Gaps = 4/92 (4%)

Query: 12 LEEAQNAALRNEI----PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
          L EA   AL N      P GAV V + ++++RA NR     D + HAE++AIR   + L 
Sbjct: 8  LREATELALANVAEGGRPYGAVIVRDGEVVARAANRIHATNDPSDHAEMVAIRAASQQLG 67

Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLY 99
          +  L +  +Y +  PC MC AA+ LA +++ Y
Sbjct: 68 RPKLDDCIVYASGRPCPMCHAAMRLAGVKQGY 99


>gi|239816940|ref|YP_002945850.1| CMP/dCMP deaminase zinc-binding [Variovorax paradoxus S110]
 gi|239803517|gb|ACS20584.1| CMP/dCMP deaminase zinc-binding [Variovorax paradoxus S110]
          Length = 176

 Score = 57.8 bits (138), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 35/97 (36%), Positives = 54/97 (55%), Gaps = 2/97 (2%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIR-MGCR 64
           ++  A+  +  A  R   P G+V V    ++++ A N N E  D TAHAE+ A+R +  R
Sbjct: 25  YLRKAIVWSHAARRRGNRPFGSVIVSAAGEVLAEAANSNTESGDCTAHAEMNALRALAGR 84

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
            L++E L    +Y + EPC MCA AI  + I R+ +G
Sbjct: 85  GLTREELAGATIYASGEPCVMCAGAIFWSNIGRVVFG 121


>gi|153808000|ref|ZP_01960668.1| hypothetical protein BACCAC_02286 [Bacteroides caccae ATCC 43185]
 gi|149129609|gb|EDM20823.1| hypothetical protein BACCAC_02286 [Bacteroides caccae ATCC 43185]
          Length = 156

 Score = 57.8 bits (138), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 32/78 (41%), Positives = 40/78 (51%), Gaps = 1/78 (1%)

Query: 25  PVGAVAVLNNKIISRAG-NRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83
           P GAV      +I   G NR     D TAHAE+ AIR     L    L   ++Y + EPC
Sbjct: 24  PFGAVIATKEGVIVATGVNRVTTSCDPTAHAEVSAIRAAAAKLGTFDLSGYEIYTSCEPC 83

Query: 84  TMCAAAISLARIRRLYYG 101
            MC  AI  AR+ ++YYG
Sbjct: 84  PMCLGAIYWARLDKMYYG 101


>gi|222480528|ref|YP_002566765.1| CMP/dCMP deaminase zinc-binding [Halorubrum lacusprofundi ATCC
           49239]
 gi|222453430|gb|ACM57695.1| CMP/dCMP deaminase zinc-binding [Halorubrum lacusprofundi ATCC
           49239]
          Length = 174

 Score = 57.4 bits (137), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 48/98 (48%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           ++  A+E A+ A      P GA+ VL+ +I++ A N      D+ AH E+   R   R L
Sbjct: 29  YVDRAIELAEEAVEMGNTPFGALLVLDGEIVAEAHNETLTEDDLAAHPELALARWAGREL 88

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASN 104
             +      +Y + EPC MCA  I  A I R+ +G + 
Sbjct: 89  DVDERARCTMYASTEPCPMCATGIHYAGIGRVVFGVAG 126


>gi|323136503|ref|ZP_08071585.1| CMP/dCMP deaminase, zinc-binding [Methylocystis sp. ATCC 49242]
 gi|322398577|gb|EFY01097.1| CMP/dCMP deaminase, zinc-binding [Methylocystis sp. ATCC 49242]
          Length = 189

 Score = 57.4 bits (137), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 33/97 (34%), Positives = 47/97 (48%), Gaps = 4/97 (4%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  AL+EA     R + P GAV     ++++   N  +   D TAH E++AIR   +  
Sbjct: 49  YMRIALDEAA----RGDFPFGAVIEKGGRVLATGHNSGKSTNDPTAHGEMVAIRNFIKSH 104

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
               L    +Y T EPC MC  AI     RR+ + AS
Sbjct: 105 PSAELNGATIYTTGEPCPMCMGAIIWCGFRRVVFAAS 141


>gi|92114624|ref|YP_574552.1| cytosine deaminase [Chromohalobacter salexigens DSM 3043]
 gi|91797714|gb|ABE59853.1| Cytosine deaminase [Chromohalobacter salexigens DSM 3043]
          Length = 149

 Score = 57.4 bits (137), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 33/97 (34%), Positives = 48/97 (49%), Gaps = 1/97 (1%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           + FM  A+EEA+       +P+G+V V   +II R  N+ ++      H E+ A+    R
Sbjct: 2   DPFMQAAIEEARKGYEAGGVPIGSVLVHRGEIIGRGHNQRQQRGSAILHGEMDALENAGR 61

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
            L   +  E  LY TL PC MC+ AI L  I  +  G
Sbjct: 62  -LPAHVYREAVLYTTLSPCPMCSGAIVLYGIPEVVIG 97


>gi|284052639|ref|ZP_06382849.1| CMP/dCMP deaminase zinc-binding protein [Arthrospira platensis str.
           Paraca]
          Length = 75

 Score = 57.4 bits (137), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 30/72 (41%), Positives = 36/72 (50%)

Query: 78  VTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRS 137
           VTLEPC MCA AI  ARI  L YG  +PK G I            +H   +  GI E   
Sbjct: 1   VTLEPCPMCAGAILQARIGLLVYGVDDPKTGSIRTVCNLPDSPASYHRLPVLGGILESSC 60

Query: 138 RQIIQDFFKERR 149
           RQ +Q +F + R
Sbjct: 61  RQQLQSWFAQHR 72


>gi|70733728|ref|YP_257368.1| guanine deaminase [Pseudomonas fluorescens Pf-5]
 gi|68348027|gb|AAY95633.1| guanine deaminase, putative [Pseudomonas fluorescens Pf-5]
          Length = 153

 Score = 57.4 bits (137), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 33/83 (39%), Positives = 47/83 (56%), Gaps = 7/83 (8%)

Query: 25  PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVD---LYVTLE 81
           P GA+ V N ++++ A N     +D TAHAE+LAIR   R L     P +D   +Y + +
Sbjct: 25  PFGALLVRNGRVLAEAVNEIHLSQDPTAHAEMLAIRAASRQLG----PRLDDCVIYASGQ 80

Query: 82  PCTMCAAAISLARIRRLYYGASN 104
           PC MC AA+ L  + R  + ASN
Sbjct: 81  PCPMCLAAMYLCGVSRAVFAASN 103


>gi|78063661|ref|YP_373569.1| cytidine/deoxycytidylate deaminase [Burkholderia sp. 383]
 gi|77971546|gb|ABB12925.1| Cytidine/deoxycytidylate deaminase [Burkholderia sp. 383]
          Length = 155

 Score = 57.4 bits (137), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 27/76 (35%), Positives = 42/76 (55%)

Query: 25  PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84
           P   V V + +I++ + N   +  D TAHAEILA+R  CR L  E L + ++Y+   PC 
Sbjct: 21  PFATVIVRDGEIVAESPNLVAQTSDPTAHAEILAVRDACRKLGTEHLTDCEIYILASPCP 80

Query: 85  MCAAAISLARIRRLYY 100
           MC  ++     +R+ Y
Sbjct: 81  MCLGSLYYCSPKRVVY 96


>gi|170751807|ref|YP_001758067.1| CMP/dCMP deaminase zinc-binding [Methylobacterium radiotolerans JCM
           2831]
 gi|170658329|gb|ACB27384.1| CMP/dCMP deaminase zinc-binding [Methylobacterium radiotolerans JCM
           2831]
          Length = 152

 Score = 57.4 bits (137), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 29/79 (36%), Positives = 44/79 (55%)

Query: 25  PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84
           P GAV V +  ++ RA N      D +AHAE++A+R   R+L +  L +  +Y +  PC 
Sbjct: 25  PYGAVIVRDGAVLVRAANTVHATNDPSAHAEMVALREASRLLGRRDLGDCVMYASGRPCP 84

Query: 85  MCAAAISLARIRRLYYGAS 103
           MC AA+ LA  +  Y+  S
Sbjct: 85  MCHAAMRLAGFKEGYFAFS 103


>gi|160883688|ref|ZP_02064691.1| hypothetical protein BACOVA_01660 [Bacteroides ovatus ATCC 8483]
 gi|260170907|ref|ZP_05757319.1| cytidine/deoxycytidylate deaminase [Bacteroides sp. D2]
 gi|293369917|ref|ZP_06616489.1| guanine deaminase [Bacteroides ovatus SD CMC 3f]
 gi|299146282|ref|ZP_07039350.1| guanine deaminase [Bacteroides sp. 3_1_23]
 gi|315919237|ref|ZP_07915477.1| conserved hypothetical protein [Bacteroides sp. D2]
 gi|156110773|gb|EDO12518.1| hypothetical protein BACOVA_01660 [Bacteroides ovatus ATCC 8483]
 gi|292634999|gb|EFF53519.1| guanine deaminase [Bacteroides ovatus SD CMC 3f]
 gi|298516773|gb|EFI40654.1| guanine deaminase [Bacteroides sp. 3_1_23]
 gi|313693112|gb|EFS29947.1| conserved hypothetical protein [Bacteroides sp. D2]
          Length = 156

 Score = 57.4 bits (137), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 32/78 (41%), Positives = 42/78 (53%), Gaps = 1/78 (1%)

Query: 25  PVGAV-AVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83
           P GAV A    +I++   NR     D TAHAE+ AIR     L    L   ++Y + EPC
Sbjct: 24  PFGAVIATKEGEIVATGVNRVTASCDPTAHAEVSAIRAAAAKLGTFNLSGYEIYTSCEPC 83

Query: 84  TMCAAAISLARIRRLYYG 101
            MC  AI  AR+ ++YYG
Sbjct: 84  PMCLGAIYWARLDKMYYG 101


>gi|114775692|ref|ZP_01451260.1| cytosine deaminase [Mariprofundus ferrooxydans PV-1]
 gi|114553803|gb|EAU56184.1| cytosine deaminase [Mariprofundus ferrooxydans PV-1]
          Length = 145

 Score = 57.4 bits (137), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 30/95 (31%), Positives = 49/95 (51%), Gaps = 1/95 (1%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           F+  A++EA+       IP+G+V V++ +I+ R  NR  +      HAE+  +    R+ 
Sbjct: 4   FLRAAIDEARQGMAEGGIPIGSVLVIDGEIVGRGHNRRVQQGSAVLHAEMDCLEQAGRLT 63

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
           + +      LY TL PC MC+ A+ L  I R+  G
Sbjct: 64  AAD-YRRATLYSTLSPCDMCSGAVLLYGIPRVVVG 97


>gi|209548305|ref|YP_002280222.1| CMP/dCMP deaminase zinc-binding [Rhizobium leguminosarum bv.
           trifolii WSM2304]
 gi|209534061|gb|ACI53996.1| CMP/dCMP deaminase zinc-binding [Rhizobium leguminosarum bv.
           trifolii WSM2304]
          Length = 157

 Score = 57.4 bits (137), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 33/110 (30%), Positives = 56/110 (50%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M+    F+  A+  +++A  + + P G+V V + ++I RA N      D+T HAE+  I+
Sbjct: 1   MENHEPFLREAIALSKSAMDQGDEPFGSVLVKDGEVILRAENSVFTGHDMTNHAEMNLIK 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI 110
              +      L +  LY + EPC MC+ AI  + I R+ +  S  + G I
Sbjct: 61  SAAKHYDTGFLADCTLYTSTEPCAMCSGAIYWSGIGRMVFACSEARLGEI 110


>gi|312215394|emb|CBX95346.1| similar to cytosine deaminase [Leptosphaeria maculans]
          Length = 152

 Score = 57.4 bits (137), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 41/149 (27%), Positives = 63/149 (42%), Gaps = 11/149 (7%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAI 59
           M   ++    ALEEA+  +    +P+GA  V    KI+ R  N   +    T HAEI A+
Sbjct: 1   MSSADIGFQAALEEARTGSSEGGLPIGACLVSAQGKILGRGHNMRIQRGSATLHAEISAL 60

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
               R L      +  +Y TL PC MC  A  L +++R+  G +    GG ++       
Sbjct: 61  ERAGR-LPASAYQDATMYTTLSPCDMCTGACILYKVKRVVIGENQTFVGGEDHLKSKGIE 119

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKER 148
                 PE          + ++ DF KE+
Sbjct: 120 VVVLQDPEC---------QNLMADFIKEK 139


>gi|289755883|ref|ZP_06515261.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis
           EAS054]
 gi|289696470|gb|EFD63899.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis
           EAS054]
          Length = 111

 Score = 57.4 bits (137), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 28/74 (37%), Positives = 41/74 (55%)

Query: 76  LYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQ 135
           L VT+EPCTMCA A+ LAR+ RL +GA  PK G + +          +H PE+  G+  +
Sbjct: 36  LAVTVEPCTMCAGALVLARVARLVFGAWEPKTGAVGSLWDVVRDRRLNHRPEVRGGVLAR 95

Query: 136 RSRQIIQDFFKERR 149
                ++ FF  +R
Sbjct: 96  ECAAPLEAFFARQR 109


>gi|86143346|ref|ZP_01061748.1| guanine deaminase [Leeuwenhoekiella blandensis MED217]
 gi|85830251|gb|EAQ48711.1| guanine deaminase [Leeuwenhoekiella blandensis MED217]
          Length = 149

 Score = 57.4 bits (137), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 35/95 (36%), Positives = 45/95 (47%), Gaps = 2/95 (2%)

Query: 29  VAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAA 88
           V V +  II+   NR  E  D T HAE+  I+  C+ L  + L    LY + EPC MC  
Sbjct: 32  VIVKDGSIIAEGHNRVGENTDCTQHAELAMIQEACKKLGSKSLKGCILYTSCEPCLMCLG 91

Query: 89  AISLARIRRLYYGAS--NPKGGGIENGTQFYTLAT 121
           A   A +  +YYGAS  + K  G      FY   T
Sbjct: 92  ASRWAALDAVYYGASAADAKEAGYVYSQLFYNSHT 126


>gi|255724014|ref|XP_002546936.1| hypothetical protein CTRG_01242 [Candida tropicalis MYA-3404]
 gi|240134827|gb|EER34381.1| hypothetical protein CTRG_01242 [Candida tropicalis MYA-3404]
          Length = 279

 Score = 57.4 bits (137), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 42/126 (33%), Positives = 62/126 (49%), Gaps = 13/126 (10%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           +M+ +L     A L NE PV  + V    ++IIS   N      + T HAE +A++   R
Sbjct: 11  YMAISLFVGYKALLNNETPVSCIVVNSKTDEIISIGYNYTNHSLNGTQHAEFIALQ---R 67

Query: 65  ILSQEILPEVDL--YVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
             S E +   DL  YVT+EPC MCA+ +    I ++ +G  N + GG  NG    T+   
Sbjct: 68  FESDESINYSDLILYVTVEPCIMCASYLRQLGIGKVIFGCGNDRFGG--NG----TVLPV 121

Query: 123 HHSPEI 128
           H  P +
Sbjct: 122 HKDPSL 127


>gi|117921416|ref|YP_870608.1| CMP/dCMP deaminase, zinc-binding [Shewanella sp. ANA-3]
 gi|117613748|gb|ABK49202.1| CMP/dCMP deaminase, zinc-binding [Shewanella sp. ANA-3]
          Length = 145

 Score = 57.4 bits (137), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 29/95 (30%), Positives = 51/95 (53%), Gaps = 1/95 (1%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           F+  A++EA+       IP+G+V V++ +I++R  N+  +      HAE+  +    R+ 
Sbjct: 4   FLQAAIDEAKQGLAEGGIPIGSVLVIDGEIVARGHNKRVQQGSAVLHAEMDCLENAGRLT 63

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
           + +   +  LY TL PC MC+ AI L  I ++  G
Sbjct: 64  AAD-YQKATLYSTLSPCDMCSGAILLYGIPKVVVG 97


>gi|188582573|ref|YP_001926018.1| CMP/dCMP deaminase zinc-binding [Methylobacterium populi BJ001]
 gi|179346071|gb|ACB81483.1| CMP/dCMP deaminase zinc-binding [Methylobacterium populi BJ001]
          Length = 153

 Score = 57.0 bits (136), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 34/92 (36%), Positives = 50/92 (54%), Gaps = 4/92 (4%)

Query: 12 LEEAQNAALRNEI----PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
          L EA   AL N      P GAV V   ++++RA NR     D + HAE++AIR   + L 
Sbjct: 8  LREATELALANVAEGGRPYGAVIVREGEVVARAANRIHATNDPSDHAEMVAIRAASQRLG 67

Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLY 99
          +  L +  +Y +  PC MC AA+ LA +++ Y
Sbjct: 68 RPKLDDCIVYASGRPCPMCHAAMRLAGVKQSY 99


>gi|327540848|gb|EGF27409.1| guanine deaminase [Rhodopirellula baltica WH47]
          Length = 155

 Score = 57.0 bits (136), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 33/75 (44%), Positives = 43/75 (57%), Gaps = 8/75 (10%)

Query: 29  VAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAA 88
           +AV +N+++SR         D TAHAE++AI    + L    L  + L  T EPC MC A
Sbjct: 36  IAVAHNQVVSRC--------DPTAHAEVVAIGKAAKKLGDPDLSGLWLVSTGEPCPMCLA 87

Query: 89  AISLARIRRLYYGAS 103
           AI LA I R+ YGAS
Sbjct: 88  AIGLAGIERVAYGAS 102


>gi|229822451|ref|YP_002883977.1| CMP/dCMP deaminase zinc-binding [Beutenbergia cavernae DSM 12333]
 gi|229568364|gb|ACQ82215.1| CMP/dCMP deaminase zinc-binding [Beutenbergia cavernae DSM 12333]
          Length = 176

 Score = 57.0 bits (136), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 35/94 (37%), Positives = 52/94 (55%), Gaps = 5/94 (5%)

Query: 21  RNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC--RILSQEILPEVDLYV 78
           R E+P+GAV      +I RA  + + L     HA++LA+      R   +   P + L V
Sbjct: 30  RGEMPIGAVVFAGEDVIGRAFTQEQSLGRRIVHADLLAMIAADEHRGFDRSAGP-LTLAV 88

Query: 79  TLEPCTMC-AAAISLARIRRLYYGASNPKGGGIE 111
            LEPC MC  AAI+L  + R++YG ++P  GG+E
Sbjct: 89  NLEPCLMCLGAAITLG-VERVFYGLASPNDGGVE 121


>gi|160872356|ref|ZP_02062488.1| cytosine deaminase (Cytosine aminohydrolase) [Rickettsiella grylli]
 gi|159121155|gb|EDP46493.1| cytosine deaminase (Cytosine aminohydrolase) [Rickettsiella grylli]
          Length = 169

 Score = 57.0 bits (136), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 36/102 (35%), Positives = 53/102 (51%), Gaps = 4/102 (3%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKD--VTAHAEILAI 59
           KK   F+  A +EA        IP+G++ V+ NK+  RA  RN+ +++  +  H E   +
Sbjct: 6   KKEREFLDLAYQEALLGLKEGGIPIGSILVVENKV--RAKGRNKRIQEHSMIKHGETDCL 63

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
               R +  E L    LY TL PC+MCA AI L +I R+  G
Sbjct: 64  ENTRRKVLPEDLQRATLYTTLSPCSMCAGAILLHKIPRVIVG 105


>gi|282164705|ref|YP_003357090.1| cytosine deaminase [Methanocella paludicola SANAE]
 gi|282157019|dbj|BAI62107.1| cytosine deaminase [Methanocella paludicola SANAE]
          Length = 145

 Score = 57.0 bits (136), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 36/104 (34%), Positives = 52/104 (50%), Gaps = 2/104 (1%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           N FM  AL+EA+       IP+G+V V++  I+ R  NR  +      HAE+  +    R
Sbjct: 2   NEFMRAALDEAKKGLREGGIPIGSVLVVDGVIVGRGHNRRVQQGSTIKHAEMDCLESAGR 61

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS-NPKG 107
            L      +  LY TL PC MC+ A+ L  I ++  G + N KG
Sbjct: 62  -LRAATYRKSTLYSTLSPCDMCSGAVLLYGIPKVVIGENMNFKG 104


>gi|156040950|ref|XP_001587461.1| hypothetical protein SS1G_11453 [Sclerotinia sclerotiorum 1980]
 gi|154695837|gb|EDN95575.1| hypothetical protein SS1G_11453 [Sclerotinia sclerotiorum 1980
           UF-70]
          Length = 245

 Score = 57.0 bits (136), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 46/145 (31%), Positives = 60/145 (41%), Gaps = 42/145 (28%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAI----- 59
           FM  AL  A  A   NE PVG V V  +  K+++R  N      + T HAE +AI     
Sbjct: 30  FMGEALAMANLALNTNETPVGCVLVDPVLKKVVARGMNATNRSYNGTRHAEFIAIDELLS 89

Query: 60  ---RMGC--------------------------------RILSQEILPEVDLYVTLEPCT 84
              R  C                                R    E +  +DLYVT+EPC 
Sbjct: 90  SSLRSDCGSADETREAKRKREENGSEADHGQGGGSEISGRGYGPENMKNLDLYVTIEPCI 149

Query: 85  MCAAAISLARIRRLYYGASNPKGGG 109
           MCA+ +    IR+++YGA N K GG
Sbjct: 150 MCASLLQQFGIRKVWYGAVNDKFGG 174


>gi|70990810|ref|XP_750254.1| cytosine deaminase [Aspergillus fumigatus Af293]
 gi|119496775|ref|XP_001265161.1| cytosine deaminase, putative [Neosartorya fischeri NRRL 181]
 gi|66847886|gb|EAL88216.1| cytosine deaminase, putative [Aspergillus fumigatus Af293]
 gi|119413323|gb|EAW23264.1| cytosine deaminase, putative [Neosartorya fischeri NRRL 181]
 gi|159130729|gb|EDP55842.1| cytosine deaminase, putative [Aspergillus fumigatus A1163]
          Length = 148

 Score = 57.0 bits (136), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 42/139 (30%), Positives = 65/139 (46%), Gaps = 11/139 (7%)

Query: 11  ALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQE 69
           ALEEA+  A    +P+GA  V  + KI+ R  N   +    T HAE+ A+    R L   
Sbjct: 10  ALEEAKKGAAEGGVPIGAALVSKDGKILGRGHNMRVQKGSATLHAEMSALENSGR-LPAS 68

Query: 70  ILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIY 129
                 +Y TL PC MC  A  L +++R+  G +    GG E     Y L   +   E+ 
Sbjct: 69  AYEGATMYTTLSPCDMCTGACILYKVKRVVIGENKNFMGGEE-----YLL---NRGKEVV 120

Query: 130 PGISEQRSRQIIQDFFKER 148
             +  +  +Q+++ F KE+
Sbjct: 121 V-LDNEECKQLMEKFIKEK 138


>gi|75908250|ref|YP_322546.1| cytidine/deoxycytidylate deaminase [Anabaena variabilis ATCC 29413]
 gi|75701975|gb|ABA21651.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [Anabaena
           variabilis ATCC 29413]
          Length = 141

 Score = 57.0 bits (136), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 36/97 (37%), Positives = 51/97 (52%), Gaps = 4/97 (4%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  A+ EA+    + + P GAV V ++++++ A N      D +AHAEI  +R     L
Sbjct: 6   FMRLAIAEAK----KGDAPYGAVIVKDDQVVAFAHNTVGRDNDPSAHAEINVVRRLTAQL 61

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
               L    +Y T EPC MCAAA   + I  + YGAS
Sbjct: 62  QSFSLEGYSIYTTGEPCPMCAAACVWSGIAEIIYGAS 98


>gi|50290647|ref|XP_447756.1| hypothetical protein [Candida glabrata CBS 138]
 gi|49527067|emb|CAG60703.1| unnamed protein product [Candida glabrata]
          Length = 259

 Score = 57.0 bits (136), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 39/125 (31%), Positives = 62/125 (49%), Gaps = 13/125 (10%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILA 58
           M K    +  AL+ A+ A    E PV  V V   ++ +++   N   +    TAHAE +A
Sbjct: 1   MDKYLKHIDSALKLARYALDHGETPVACVFVHEKSDSVVAYGLNDTNDSLSGTAHAEFVA 60

Query: 59  IRM---------GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109
           +RM            +  +++  E+  YVT+EPC MCA+A+    I ++ +G  N + GG
Sbjct: 61  MRMLRDAVQAQGYASVQLKQLFKEIVCYVTVEPCIMCASALKQMGIHKIVFGCGNDRFGG 120

Query: 110 IENGT 114
             NGT
Sbjct: 121 --NGT 123


>gi|254577709|ref|XP_002494841.1| ZYRO0A10890p [Zygosaccharomyces rouxii]
 gi|238937730|emb|CAR25908.1| ZYRO0A10890p [Zygosaccharomyces rouxii]
          Length = 248

 Score = 57.0 bits (136), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 75/151 (49%), Gaps = 19/151 (12%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVL--NNKIISRAGNR-NRELKDVTAHAEILAIRMGCR 64
           M  AL   + A    E PV  + V    ++I++   N  NR L  V AHAE + I     
Sbjct: 11  METALRLGRYALDHGETPVACIFVHIPTDQIVAFGMNDTNRSLTGV-AHAEFMGIEQIRE 69

Query: 65  ILS-QEILP---EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFY--- 117
            +S  E++P   ++ LYVT+EPC MCA+A+    I ++ +GA N + GG  NGT      
Sbjct: 70  FVSPDELVPFFGDIALYVTVEPCIMCASALKQLGIGKVIFGAGNDRFGG--NGTVLSINQ 127

Query: 118 ---TLATCHHSPEIYPGISEQRSRQIIQDFF 145
              TL   H S    PG+  + +  +++ F+
Sbjct: 128 DSCTLGGKHES---IPGVLRREAIMLLRYFY 155


>gi|258593876|emb|CBE70217.1| Cytosine deaminase (Cytosine aminohydrolase) [NC10 bacterium 'Dutch
           sediment']
          Length = 154

 Score = 57.0 bits (136), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 35/108 (32%), Positives = 52/108 (48%), Gaps = 9/108 (8%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           F+  A E+A+ +     +P+GAV V N+ +I+   NR  +  D TAH E+  +R   R  
Sbjct: 11  FIRAAFEQARKSYNEGGLPIGAVMVENSTVIAVGHNRRVQDGDPTAHGEMDCLRQAGR-- 68

Query: 67  SQEILPEVD---LYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIE 111
                P  D   LY TL PC MC+  +    I+R+  G      G +E
Sbjct: 69  ----RPRYDGITLYTTLSPCMMCSGTVLQFGIKRVVIGEKQNFPGNVE 112


>gi|325964675|ref|YP_004242581.1| cytosine/adenosine deaminase [Arthrobacter phenanthrenivorans
           Sphe3]
 gi|323470762|gb|ADX74447.1| cytosine/adenosine deaminase [Arthrobacter phenanthrenivorans
           Sphe3]
          Length = 164

 Score = 57.0 bits (136), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 34/97 (35%), Positives = 47/97 (48%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           F++ ++  A    L +  P GA+ V  +       NR     D TAHAE+ AIR  CR L
Sbjct: 10  FLARSIRLATANVLNSGGPFGAMIVTADGRAFDGVNRVTADNDPTAHAEVTAIRTACREL 69

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
               L    LY + EPC MC A+   AR+ R+ + A 
Sbjct: 70  GTFDLSGATLYTSCEPCPMCLASALWARVERVVFAAD 106


>gi|170751176|ref|YP_001757436.1| CMP/dCMP deaminase zinc-binding [Methylobacterium radiotolerans JCM
           2831]
 gi|170657698|gb|ACB26753.1| CMP/dCMP deaminase zinc-binding [Methylobacterium radiotolerans JCM
           2831]
          Length = 160

 Score = 57.0 bits (136), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 34/98 (34%), Positives = 48/98 (48%), Gaps = 2/98 (2%)

Query: 7   FMSCALEEAQNAALRNEIP--VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           FM+ A+  ++  +L +      G V V + +II+   NR     D T H EI AIR  C+
Sbjct: 8   FMARAIALSEKTSLVDSAGGVFGCVIVQDGEIIAEGANRVVAENDPTWHGEIEAIRKACK 67

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGA 102
                 L    LY + EPC MC AA   A ++ +YY A
Sbjct: 68  AQGSFKLRNATLYTSAEPCPMCMAAAYWAGVKNVYYAA 105


>gi|302529650|ref|ZP_07281992.1| guanine deaminase [Streptomyces sp. AA4]
 gi|302438545|gb|EFL10361.1| guanine deaminase [Streptomyces sp. AA4]
          Length = 162

 Score = 57.0 bits (136), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 30/76 (39%), Positives = 42/76 (55%)

Query: 25  PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84
           P GA+ V + +I++   NR     D TAHAE++AIR  C+ L    L    L  + EPC 
Sbjct: 31  PFGALVVKDGEIVATGVNRVTPSLDPTAHAEVVAIRAACQALGTFSLAGCVLVSSCEPCP 90

Query: 85  MCAAAISLARIRRLYY 100
           MC A+   AR+ R+ Y
Sbjct: 91  MCLASSLWARVDRVLY 106


>gi|319425606|gb|ADV53680.1| Cytosine deaminase [Shewanella putrefaciens 200]
          Length = 145

 Score = 57.0 bits (136), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 31/95 (32%), Positives = 49/95 (51%), Gaps = 1/95 (1%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           F+  A++EA+       IP+G+V V++  I++R  N+  +      HAE+  +    R L
Sbjct: 4   FLQAAIDEAKQGLAEGGIPIGSVLVIDGNIVARGHNKRVQQGSAVLHAEMDCLENAGR-L 62

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
           S     +  LY TL PC MC+ AI L  I ++  G
Sbjct: 63  SAADYQKATLYSTLSPCDMCSGAILLYGIPKVVVG 97


>gi|86741404|ref|YP_481804.1| tRNA-adenosine deaminase [Frankia sp. CcI3]
 gi|86568266|gb|ABD12075.1| tRNA-adenosine deaminase [Frankia sp. CcI3]
          Length = 196

 Score = 57.0 bits (136), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 40/126 (31%), Positives = 59/126 (46%), Gaps = 1/126 (0%)

Query: 22  NEIPVGAVAVLNNKIISRAGNRNRE-LKDVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80
           ++ PVGAV    +     A + +RE   D TA+AEILA+R   + L    L +  L  TL
Sbjct: 63  DDPPVGAVIYGPDGTEIAAAHHDRERTADPTAYAEILALRQAAQALGTWRLTDCTLVTTL 122

Query: 81  EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140
           EP TM A AI LARI RL  G  +   G + +          +H  E+ P + +     +
Sbjct: 123 EPGTMSAGAIVLARIPRLIIGTWDKYNGAVCSLWDVVRDRRLNHFVEVIPDVLKDECDAL 182

Query: 141 IQDFFK 146
           +  +  
Sbjct: 183 LDSYLD 188


>gi|292494136|ref|YP_003533279.1| Cytidine/deoxycytidylate deaminase, zinc-binding region (TBD)
           [Haloferax volcanii DS2]
 gi|291369169|gb|ADE01399.1| Cytidine/deoxycytidylate deaminase, zinc-binding region (TBD)
           [Haloferax volcanii DS2]
          Length = 153

 Score = 57.0 bits (136), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 31/101 (30%), Positives = 49/101 (48%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  + E A+ AA R + P G+V V ++++I R  NR     D+  H E+      CR   
Sbjct: 14  MRESFELARKAAARGDEPFGSVLVRDDEVIMRDSNRIVTESDIRRHPELQLAYRACREYD 73

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGG 108
            +    + +Y + EPC MCA  ++ A   R+ YG    + G
Sbjct: 74  ADERAAMVMYTSTEPCPMCAGGMATAGFARVVYGVGGDEIG 114


>gi|58261492|ref|XP_568156.1| hypothetical protein CNL06320 [Cryptococcus neoformans var.
           neoformans JEC21]
 gi|57230238|gb|AAW46639.1| hypothetical protein CNL06320 [Cryptococcus neoformans var.
           neoformans JEC21]
          Length = 209

 Score = 57.0 bits (136), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 27/74 (36%), Positives = 40/74 (54%), Gaps = 6/74 (8%)

Query: 33  NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISL 92
           NN+++    N   E+ D T H E+ AIR+       EI P+  +Y T EPC MC + I  
Sbjct: 65  NNELLCSGYNSQLEIGDPTEHGEVNAIRI------TEIWPQSWIYTTAEPCPMCGSTILQ 118

Query: 93  ARIRRLYYGASNPK 106
           +  +R+ YG S+P 
Sbjct: 119 SGFKRVVYGTSSPD 132


>gi|291005515|ref|ZP_06563488.1| guanine deaminase [Saccharopolyspora erythraea NRRL 2338]
          Length = 160

 Score = 56.6 bits (135), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 33/94 (35%), Positives = 49/94 (52%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M+ A+E A  +      P GAV V + +I++   N+     D TAHAE++AIR  C+ L
Sbjct: 11  WMARAIELATRSVADGGGPFGAVVVKDGEIVATGHNQVTTNLDPTAHAEVVAIRNACQAL 70

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
               L    L  + EPC MC A+   AR+  + Y
Sbjct: 71  GTFKLDGCVLVTSCEPCPMCMASALWARMESVVY 104


>gi|294495182|ref|YP_003541675.1| CMP/dCMP deaminase zinc-binding protein [Methanohalophilus mahii
           DSM 5219]
 gi|292666181|gb|ADE36030.1| CMP/dCMP deaminase zinc-binding protein [Methanohalophilus mahii
           DSM 5219]
          Length = 147

 Score = 56.6 bits (135), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 36/97 (37%), Positives = 49/97 (50%), Gaps = 3/97 (3%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  A+ EA     +  IP+G+V V +  II R  N   +  D  AHAEI  +R   RI 
Sbjct: 4   FMKEAINEAMAGRDKGGIPIGSVLVRDGMIIGRGHNLRVQNDDPLAHAEISCMRDAGRIG 63

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
           S     +  LY TL PC +CA A+    I+++  G S
Sbjct: 64  S---YADTVLYSTLMPCYLCAGAVVQFGIKKVVVGES 97


>gi|294654357|ref|XP_456407.2| DEHA2A01584p [Debaryomyces hansenii CBS767]
 gi|199428817|emb|CAG84359.2| DEHA2A01584p [Debaryomyces hansenii]
          Length = 321

 Score = 56.6 bits (135), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 47/158 (29%), Positives = 73/158 (46%), Gaps = 29/158 (18%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVL--NNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M+ AL     A + NE PV  + V    N+I+S   N      + T HAE +AI    ++
Sbjct: 11  MAIALFIGYRAMINNETPVACILVSRSTNQILSIGYNDTNRSLNGTRHAEFIAID---KV 67

Query: 66  LSQ-------------EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN 112
           +SQ                 +V LYVT+EPC MCA+A+    I  + YG  N + GG  N
Sbjct: 68  MSQIPVHDRSDIAKIQGFFGDVILYVTVEPCIMCASALKQIGIGYVVYGCGNDRFGG--N 125

Query: 113 GTQFYTLATCHHSP-----EIYPGISEQRSRQIIQDFF 145
           G    T+ + H        + Y G+    + Q++++F+
Sbjct: 126 G----TILSIHQDKINKAYQSYGGVLRTEAVQLLRNFY 159


>gi|327278242|ref|XP_003223871.1| PREDICTED: tRNA-specific adenosine deaminase-like protein 3-like
           [Anolis carolinensis]
          Length = 353

 Score = 56.6 bits (135), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 42/146 (28%), Positives = 73/146 (50%), Gaps = 14/146 (9%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M  A++ AQ  A +   PVGAV V   + K+++  G+  R+  +   H      + G   
Sbjct: 214 MELAIQAAQQGAKQGMRPVGAVVVDPSSGKVLA-VGHDCRDGLNPIDH------QSGHSS 266

Query: 66  LSQEILPEV----DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
            S   LP +    D+Y+T EPC MCA ++  +RI R++YG  +P  G +      ++   
Sbjct: 267 PSTNGLPYICTGYDMYLTREPCAMCAMSLVHSRIERVFYGVPSPH-GALGTALHIHSRRD 325

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKE 147
            +H  E++ G+ E R R + Q+  ++
Sbjct: 326 LNHRYEVFRGVLEGRCRSLEQESARD 351


>gi|134097849|ref|YP_001103510.1| guanine deaminase [Saccharopolyspora erythraea NRRL 2338]
 gi|133910472|emb|CAM00585.1| guanine deaminase [Saccharopolyspora erythraea NRRL 2338]
          Length = 162

 Score = 56.6 bits (135), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 33/94 (35%), Positives = 49/94 (52%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M+ A+E A  +      P GAV V + +I++   N+     D TAHAE++AIR  C+ L
Sbjct: 13  WMARAIELATRSVADGGGPFGAVVVKDGEIVATGHNQVTTNLDPTAHAEVVAIRNACQAL 72

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
               L    L  + EPC MC A+   AR+  + Y
Sbjct: 73  GTFKLDGCVLVTSCEPCPMCMASALWARMESVVY 106


>gi|21223347|ref|NP_629126.1| deaminase [Streptomyces coelicolor A3(2)]
 gi|256785550|ref|ZP_05523981.1| deaminase [Streptomyces lividans TK24]
 gi|289769446|ref|ZP_06528824.1| deaminase [Streptomyces lividans TK24]
 gi|20520975|emb|CAD30959.1| putative deaminase [Streptomyces coelicolor A3(2)]
 gi|289699645|gb|EFD67074.1| deaminase [Streptomyces lividans TK24]
          Length = 167

 Score = 56.6 bits (135), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 36/115 (31%), Positives = 55/115 (47%), Gaps = 3/115 (2%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  A+E A  +      P GA+     +I++   N+     D TAHAE+ AIR  C+ L
Sbjct: 17  WMDKAIELATTSVRNGGGPFGALIAKGGEIVALGNNQVTAGLDPTAHAEVSAIRAACKAL 76

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS--NPKGGGIENGTQFYTL 119
               L    L  + EPC MC ++   AR+ RL + A   +    G ++  +FY L
Sbjct: 77  DTFSLEGCTLVTSCEPCPMCLSSALWARVDRLVFSADRHDAAVAGFDD-RKFYDL 130


>gi|111021958|ref|YP_704930.1| guanine deaminase [Rhodococcus jostii RHA1]
 gi|110821488|gb|ABG96772.1| possible guanine deaminase [Rhodococcus jostii RHA1]
          Length = 161

 Score = 56.6 bits (135), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 36/95 (37%), Positives = 46/95 (48%), Gaps = 1/95 (1%)

Query: 11  ALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQE 69
           A+E A         P GAVAV  +  +IS   N      DVT HAE+ AI   C      
Sbjct: 17  AIELADETGDAGNRPFGAVAVGADGHVISEGANSVATSADVTEHAELDAITTACGEGRTG 76

Query: 70  ILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASN 104
            L    +Y + EPC MC+AA+  A I R+ Y AS+
Sbjct: 77  DLVGATMYASGEPCPMCSAAMVWAGITRVVYAASS 111


>gi|114045649|ref|YP_736199.1| CMP/dCMP deaminase, zinc-binding protein [Shewanella sp. MR-7]
 gi|113887091|gb|ABI41142.1| CMP/dCMP deaminase, zinc-binding protein [Shewanella sp. MR-7]
          Length = 157

 Score = 56.6 bits (135), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 36/88 (40%), Positives = 47/88 (53%), Gaps = 1/88 (1%)

Query: 12  LEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEI 70
           L  AQ       +P  AV V  + +I++   NR + L D TAHAEI AIRM   +L Q  
Sbjct: 13  LALAQKEVEGTGLPFSAVIVDESGRIVAEGVNRVQALHDCTAHAEIQAIRMATLLLKQVS 72

Query: 71  LPEVDLYVTLEPCTMCAAAISLARIRRL 98
           L  + L  + EPC  C  AI LA+I R+
Sbjct: 73  LEGMTLIASGEPCGFCYMAIQLAKISRV 100


>gi|254495568|ref|ZP_05108490.1| cytosine deaminase [Legionella drancourtii LLAP12]
 gi|254355138|gb|EET13751.1| cytosine deaminase [Legionella drancourtii LLAP12]
          Length = 147

 Score = 56.6 bits (135), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 33/93 (35%), Positives = 48/93 (51%), Gaps = 9/93 (9%)

Query: 7  FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI----RMG 62
          ++  A+EEA+ +     IP+GAV V  ++II R  N+  +      H E+ A+    R  
Sbjct: 6  YLEAAIEEARRSLAEGGIPIGAVLVYQDRIIGRGHNQRVQKGSAILHGEMDALENAGRQQ 65

Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLARI 95
           +I  Q I     LY TL PC MC+ AI L +I
Sbjct: 66 AKIYEQSI-----LYTTLSPCAMCSGAILLYKI 93


>gi|241950789|ref|XP_002418117.1| tRNA-specific adenosine deaminase subunit, putative; tRNA-specific
           adenosine-34 deaminase subunit, putative [Candida
           dubliniensis CD36]
 gi|223641456|emb|CAX43417.1| tRNA-specific adenosine deaminase subunit, putative [Candida
           dubliniensis CD36]
          Length = 280

 Score = 56.6 bits (135), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 37/110 (33%), Positives = 56/110 (50%), Gaps = 4/110 (3%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           +M+ +L     A L NE PV  + V   ++KIIS   N      + T HAE +A++    
Sbjct: 11  YMATSLFVGYKALLNNETPVSCIVVDSKSDKIISIGYNYTNHSLNGTQHAEFIALQRFTE 70

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGT 114
                   ++ LYVT+EPC MCA+ +    I ++ +G  N + GG  NGT
Sbjct: 71  QKPSIGYNDLILYVTVEPCIMCASYLRQLGIGKVIFGCGNDRFGG--NGT 118


>gi|253743085|gb|EES99615.1| Cytosine deaminase, putative [Giardia intestinalis ATCC 50581]
          Length = 163

 Score = 56.6 bits (135), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 70/143 (48%), Gaps = 14/143 (9%)

Query: 12  LEEAQNAALRNEIPVG-AVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEI 70
            EEA  A    E+PVG A+   + +I++   N     ++   HAE++A+    ++     
Sbjct: 5   FEEANLALAEREVPVGCAIVDGSGRILATGRNATNRTRNSMCHAEMVALA---QVPLDAD 61

Query: 71  LPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYP 130
           L    LYVT+EPC MCAAA+S+  +  + Y A N K GG  +      L   +H    + 
Sbjct: 62  LTGCVLYVTIEPCIMCAAALSIVGLTNVVYFARNDKFGGCGS-----VLDVNNHIESPWT 116

Query: 131 GIS-----EQRSRQIIQDFFKER 148
            +       +R+  ++Q+FF+ +
Sbjct: 117 KLDAKYMPNERAVHLLQEFFERK 139


>gi|313664896|ref|YP_004046767.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Mycoplasma leachii PG50]
 gi|312950055|gb|ADR24651.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Mycoplasma leachii PG50]
          Length = 147

 Score = 56.6 bits (135), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 37/109 (33%), Positives = 53/109 (48%), Gaps = 1/109 (0%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAI 59
           M   N  +   + E++     N+IPV    +  NN I+S A N   + KD++ HAEI  I
Sbjct: 1   MDDFNNILDLLINESKKTIKHNDIPVSCCIIDSNNNILSLAINSRYKNKDISQHAEINVI 60

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGG 108
                 L+   L +  L  TLEPC MC +AI   +I  +YY   + K G
Sbjct: 61  NNLINKLNNFNLSKYKLITTLEPCMMCYSAIKQVKINTIYYLVESYKFG 109


>gi|184201786|ref|YP_001855993.1| guanine deaminase [Kocuria rhizophila DC2201]
 gi|183582016|dbj|BAG30487.1| guanine deaminase [Kocuria rhizophila DC2201]
          Length = 170

 Score = 56.6 bits (135), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 31/79 (39%), Positives = 40/79 (50%)

Query: 25  PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84
           P GA+ V  +     A NR     D TAHAE+ AIR  C  L    L    LY + EPC 
Sbjct: 37  PFGALLVTADGREFTAVNRVTADNDPTAHAEVCAIRAACSALGTHDLGGATLYSSCEPCP 96

Query: 85  MCAAAISLARIRRLYYGAS 103
           MC +A   AR+ R+++ A 
Sbjct: 97  MCLSAALWARLDRVFFAAD 115


>gi|85014509|ref|XP_955750.1| deoxycytidylate deaminase [Encephalitozoon cuniculi GB-M1]
 gi|19171444|emb|CAD27169.1| BELONGS TO THE CYTIDINE AND DEOXYCYTIDYLATE DEAMINASE FAMILY
           [Encephalitozoon cuniculi GB-M1]
          Length = 150

 Score = 56.6 bits (135), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 34/104 (32%), Positives = 48/104 (46%), Gaps = 7/104 (6%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           + FM  A++EA  A    E+PVG V V N  ++S++ N     K    HAE+++IR    
Sbjct: 9   SFFMEMAVKEAMRAFDALEVPVGCVVVRNGIVVSKSHNMTNANKSPLDHAEVISIR---- 64

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGG 108
                       YVT EPC MC   +   +   +YYG  N   G
Sbjct: 65  ---DADCSNSTFYVTCEPCIMCMGILGRLKGVEVYYGCRNEVFG 105


>gi|294950861|ref|XP_002786810.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
 gi|239901164|gb|EER18606.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
          Length = 232

 Score = 56.6 bits (135), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 34/105 (32%), Positives = 49/105 (46%), Gaps = 2/105 (1%)

Query: 12  LEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEIL 71
           L       L+   P GA    N+ ++  A N     +D T HAE+ AIRM   +L  + L
Sbjct: 6   LSATTGVKLKEGGPFGACITRNDVVVCCAHNTFFSDRDPTCHAEMNAIRMAMHLLKTDDL 65

Query: 72  PEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116
               +Y + EPC MC  AI  + IR LY G    +    +NG ++
Sbjct: 66  AGCVIYSSFEPCPMCWGAILASGIRLLYVGLD--RHTAAKNGVEY 108


>gi|37521331|ref|NP_924708.1| hypothetical protein gll1762 [Gloeobacter violaceus PCC 7421]
 gi|35212328|dbj|BAC89703.1| gll1762 [Gloeobacter violaceus PCC 7421]
          Length = 182

 Score = 56.6 bits (135), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 42/137 (30%), Positives = 66/137 (48%), Gaps = 8/137 (5%)

Query: 14  EAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL---SQEI 70
           EA  A    +  VGA+     K+++   N+  E  DVTAH E+  +R     L   S E 
Sbjct: 29  EANAAVDEGKAGVGAMLTWRGKVLALEHNQYAETHDVTAHGEMSILRAQAERLDGMSDED 88

Query: 71  LPEVDLYVTLEPCTMCAAAISLARIRRLYYGA----SNPKGGGIENGTQFYTLATCHHSP 126
             ++ +YVTLEPC MC +A+SL  I R+ Y A    +N +   +E  T           P
Sbjct: 89  KKDLCMYVTLEPCLMCLSAMSLVGIPRVVYAALSEDANIEQALLEGATARNVNDALVRGP 148

Query: 127 -EIYPGISEQRSRQIIQ 142
            E+ PG+  +   ++++
Sbjct: 149 LELVPGVRREEGIKLLE 165


>gi|226364462|ref|YP_002782244.1| deaminase [Rhodococcus opacus B4]
 gi|226242951|dbj|BAH53299.1| putative deaminase [Rhodococcus opacus B4]
          Length = 161

 Score = 56.6 bits (135), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 36/95 (37%), Positives = 46/95 (48%), Gaps = 1/95 (1%)

Query: 11  ALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQE 69
           A+E A         P GAVAV  +  +IS   N      DVT HAE+ AI   C      
Sbjct: 17  AIELADETGDAGNRPFGAVAVGADGHVISEGANSVATSADVTEHAELDAITTACGEGRTG 76

Query: 70  ILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASN 104
            L    +Y + EPC MC+AA+  A I R+ Y AS+
Sbjct: 77  DLVGATMYASGEPCPMCSAAMVWAGITRVVYAASS 111


>gi|46205243|ref|ZP_00209765.1| COG0590: Cytosine/adenosine deaminases [Magnetospirillum
          magnetotacticum MS-1]
          Length = 141

 Score = 56.6 bits (135), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 28/75 (37%), Positives = 45/75 (60%)

Query: 25 PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84
          P GAV V + ++I+RA NR     D + HAE++A+R   + L +  L +  +Y +  PC 
Sbjct: 13 PYGAVIVRDGEVIARAANRIHRTNDPSDHAEMVALRAASQRLGRPKLDDCIVYASGRPCP 72

Query: 85 MCAAAISLARIRRLY 99
          MC AA+ LA +++ Y
Sbjct: 73 MCHAAMRLAGVKQGY 87


>gi|260943466|ref|XP_002616031.1| hypothetical protein CLUG_03273 [Clavispora lusitaniae ATCC 42720]
 gi|238849680|gb|EEQ39144.1| hypothetical protein CLUG_03273 [Clavispora lusitaniae ATCC 42720]
          Length = 296

 Score = 56.6 bits (135), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 44/122 (36%), Positives = 62/122 (50%), Gaps = 19/122 (15%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           +M+ A   A  A    E PV  V V   +  I++   N      + T HAE +AI    +
Sbjct: 9   YMAVATFVAYRAFANGETPVACVFVHEPSQTILAFGCNDTNRSLNGTRHAEFMAID---K 65

Query: 65  ILSQEIL----PE--------VDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN 112
           IL +  L    PE        V LYVT+EPC MCA+A+    I+++Y+GA+N + GG  N
Sbjct: 66  ILQENHLLNSSPEKVAAFFSQVVLYVTVEPCVMCASALRHVGIKKVYFGAANDRFGG--N 123

Query: 113 GT 114
           GT
Sbjct: 124 GT 125


>gi|119505172|ref|ZP_01627247.1| putative zinc-binding hydrolase [marine gamma proteobacterium
          HTCC2080]
 gi|119458863|gb|EAW39963.1| putative zinc-binding hydrolase [marine gamma proteobacterium
          HTCC2080]
          Length = 78

 Score = 56.6 bits (135), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 31/65 (47%), Positives = 42/65 (64%), Gaps = 1/65 (1%)

Query: 21 RNEIPVGAV-AVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVT 79
          + E+PVGAV A  + ++++ A N      D TAHAE+LA+R+G   L+   LP   LYVT
Sbjct: 14 KGEVPVGAVLAADSGEVLAVASNAQIMSCDPTAHAEMLALRLGAEKLNNYRLPGCTLYVT 73

Query: 80 LEPCT 84
          LEPCT
Sbjct: 74 LEPCT 78


>gi|46204383|ref|ZP_00209388.1| COG0590: Cytosine/adenosine deaminases [Magnetospirillum
           magnetotacticum MS-1]
          Length = 111

 Score = 56.2 bits (134), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 30/77 (38%), Positives = 39/77 (50%)

Query: 25  PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84
           P GAV V  +  +    NR  +  D TAHAE+ AIR  C  L    L    LY + EPC 
Sbjct: 28  PFGAVLVTADGQVFEGNNRVTQDNDPTAHAEVTAIRRACAALGTFDLTGATLYSSCEPCP 87

Query: 85  MCAAAISLARIRRLYYG 101
           MC A+   AR+  ++Y 
Sbjct: 88  MCLASALWARVHAVHYA 104


>gi|229820162|ref|YP_002881688.1| CMP/dCMP deaminase zinc-binding [Beutenbergia cavernae DSM 12333]
 gi|229566075|gb|ACQ79926.1| CMP/dCMP deaminase zinc-binding [Beutenbergia cavernae DSM 12333]
          Length = 163

 Score = 56.2 bits (134), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 33/104 (31%), Positives = 51/104 (49%), Gaps = 5/104 (4%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNN-----KIISRAGNRNRELKDVTAHAEI 56
            + + F++ A++ A         P GA+ V ++      +++   NR     D TAHAE+
Sbjct: 5   SRDSAFLALAVDLATANVADGGGPFGALIVRSDAQPGDHVVATGTNRVTRDHDATAHAEV 64

Query: 57  LAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
            AIR   R +    L  + LY + EPC +C AA   AR+ RL Y
Sbjct: 65  EAIRAAGRAVGSHALTGMTLYASCEPCPLCLAAALWARLDRLVY 108


>gi|218531388|ref|YP_002422204.1| CMP/dCMP deaminase zinc-binding [Methylobacterium
          chloromethanicum CM4]
 gi|218523691|gb|ACK84276.1| CMP/dCMP deaminase zinc-binding [Methylobacterium
          chloromethanicum CM4]
          Length = 153

 Score = 56.2 bits (134), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 34/92 (36%), Positives = 50/92 (54%), Gaps = 4/92 (4%)

Query: 12 LEEAQNAALRNEI----PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
          L EA   AL N      P GAV V + +++ RA NR     D + HAE++AIR   + L 
Sbjct: 8  LREATEIALANVAEGGRPYGAVIVRDGEVVVRAANRIHATNDPSDHAEMVAIRAASQQLG 67

Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRLY 99
          +  L +  +Y +  PC MC AA+ LA +++ Y
Sbjct: 68 RPKLDDCIVYASGRPCPMCHAAMRLAGVKQGY 99


>gi|298490596|ref|YP_003720773.1| CMP/dCMP deaminase zinc-binding protein ['Nostoc azollae' 0708]
 gi|298232514|gb|ADI63650.1| CMP/dCMP deaminase zinc-binding protein ['Nostoc azollae' 0708]
          Length = 143

 Score = 56.2 bits (134), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 32/96 (33%), Positives = 50/96 (52%), Gaps = 3/96 (3%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  A+ EA+       IP+G+V V N KI+ +  N+  +  D   HAEI  +R   R+ +
Sbjct: 5   MQAAISEAKQGRDEGGIPIGSVLVRNGKILGKGHNKRVQDGDPVTHAEIDCLRNAGRLGN 64

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
            +    + LY TL PC +CA A+    I+++  G S
Sbjct: 65  YK---GITLYSTLMPCYLCAGAVVQFGIKKVIAGES 97


>gi|241203539|ref|YP_002974635.1| CMP/dCMP deaminase zinc-binding [Rhizobium leguminosarum bv.
           trifolii WSM1325]
 gi|240857429|gb|ACS55096.1| CMP/dCMP deaminase zinc-binding [Rhizobium leguminosarum bv.
           trifolii WSM1325]
          Length = 158

 Score = 56.2 bits (134), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 32/110 (29%), Positives = 55/110 (50%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M+    F+  A+  +++A    + P G+V V + ++I RA N      D+T HAE+  ++
Sbjct: 1   MENHEPFLREAIALSKSAMANGDEPFGSVLVKDGEVILRAENSVFTGHDMTNHAEMNLVK 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI 110
           +  +      L    LY + EPC MC+ AI  + I R+ +  S  + G I
Sbjct: 61  LAAQHYDTAFLAGCTLYTSTEPCAMCSGAIYWSGIGRMVFACSETRLGEI 110


>gi|255035691|ref|YP_003086312.1| CMP/dCMP deaminase zinc-binding [Dyadobacter fermentans DSM 18053]
 gi|254948447|gb|ACT93147.1| CMP/dCMP deaminase zinc-binding [Dyadobacter fermentans DSM 18053]
          Length = 140

 Score = 56.2 bits (134), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 37/120 (30%), Positives = 53/120 (44%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M + + F+    E A  A      PVGAV V    I+       R   D+T HAE+ AIR
Sbjct: 1   MDEHHKFLQRCHELALQAGRSGNTPVGAVIVREGVIVGEGIEATRPDNDITRHAEVEAIR 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
                L  + L    +Y T EPC +C+ AI   +I  + +  + P  GG+ +     T A
Sbjct: 61  DALNRLGTDKLTGCAMYTTHEPCILCSYAIRHYQISWVGFEHAVPAVGGVSSPWPILTAA 120


>gi|120599757|ref|YP_964331.1| cytosine deaminase [Shewanella sp. W3-18-1]
 gi|120559850|gb|ABM25777.1| Cytosine deaminase [Shewanella sp. W3-18-1]
          Length = 145

 Score = 56.2 bits (134), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 31/95 (32%), Positives = 49/95 (51%), Gaps = 1/95 (1%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           F+  A++EA+       IP+G+V V++  I++R  N+  +      HAE+  +    R L
Sbjct: 4   FLQAAIDEAKQGLAEGGIPIGSVLVIDGNIVARGHNKRVQQGSAVLHAEMDCLENAGR-L 62

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
           S     +  LY TL PC MC+ AI L  I ++  G
Sbjct: 63  SAADYQKGTLYSTLSPCDMCSGAILLYGIPKVVVG 97


>gi|218245366|ref|YP_002370737.1| CMP/dCMP deaminase [Cyanothece sp. PCC 8801]
 gi|257058401|ref|YP_003136289.1| CMP/dCMP deaminase zinc-binding [Cyanothece sp. PCC 8802]
 gi|218165844|gb|ACK64581.1| CMP/dCMP deaminase zinc-binding [Cyanothece sp. PCC 8801]
 gi|256588567|gb|ACU99453.1| CMP/dCMP deaminase zinc-binding [Cyanothece sp. PCC 8802]
          Length = 139

 Score = 56.2 bits (134), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 32/96 (33%), Positives = 50/96 (52%), Gaps = 3/96 (3%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  A+ EA+       IP+G+V V  ++II +  N+  +  D   HAEI  +R   RI +
Sbjct: 1   MKAAIAEAKQGLQEGGIPIGSVLVKGDQIIGKGHNKRVQDGDPVTHAEIDCLRNAGRIGN 60

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
            +   +  LY TL PC +CA A+    I+++  G S
Sbjct: 61  YQ---DTVLYSTLMPCYLCAGAVVQFGIKKVIAGES 93


>gi|281210912|gb|EFA85078.1| cytidine deaminase-like protein [Polysphondylium pallidum PN500]
          Length = 499

 Score = 56.2 bits (134), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 23/67 (34%), Positives = 41/67 (61%)

Query: 76  LYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQ 135
           LY+T EPC MC+ A+  +RI+R+ +GA  P  GG+    + +T  + +H  ++Y GI E 
Sbjct: 424 LYITREPCIMCSMALVHSRIKRVIFGAVQPNAGGLGGCLKVHTQKSINHRFQVYHGILEN 483

Query: 136 RSRQIIQ 142
           + + + +
Sbjct: 484 QCKLLFE 490


>gi|219129188|ref|XP_002184777.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217403886|gb|EEC43836.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 564

 Score = 56.2 bits (134), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 31/88 (35%), Positives = 47/88 (53%), Gaps = 7/88 (7%)

Query: 23  EIPVGAVAVLNNKIISRAGN-------RNRELKDVTAHAEILAIRMGCRILSQEILPEVD 75
           ++P GAV  +++ I++RA N       R     DVT HAE+  +R+    L+ E      
Sbjct: 28  KMPFGAVLAIDSVIVARAHNQCPAAAKRGGGTGDVTRHAEMELVRLFTSKLTAEERSNAV 87

Query: 76  LYVTLEPCTMCAAAISLARIRRLYYGAS 103
           LY + EPC MCA AI  + + ++ YG S
Sbjct: 88  LYTSTEPCVMCAGAIYWSGVSKVVYGCS 115


>gi|255718193|ref|XP_002555377.1| KLTH0G07832p [Lachancea thermotolerans]
 gi|238936761|emb|CAR24940.1| KLTH0G07832p [Lachancea thermotolerans]
          Length = 250

 Score = 56.2 bits (134), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 38/114 (33%), Positives = 64/114 (56%), Gaps = 9/114 (7%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLN--NKIISRAGNR-NRELKDVTAHAEILAI-RMG 62
           FM  A + A+ A    E PV  + V    +++++   N  NR L  + AHAE + I ++ 
Sbjct: 9   FMRMATKLARYALDHGETPVACIFVHTPADQVVAYGMNDTNRSLTGI-AHAEFMGIEQIQ 67

Query: 63  CRILSQE--ILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGT 114
            +  +Q+  I  ++ LYVT+EPC MCA+A+    I+++ +G  N + GG  NG+
Sbjct: 68  SKFGAQDTSIFKDITLYVTVEPCIMCASALKQLGIQKVVFGCGNERFGG--NGS 119


>gi|116250294|ref|YP_766132.1| purine deaminase [Rhizobium leguminosarum bv. viciae 3841]
 gi|115254942|emb|CAK06016.1| putative purine deaminase [Rhizobium leguminosarum bv. viciae 3841]
          Length = 156

 Score = 56.2 bits (134), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 31/110 (28%), Positives = 56/110 (50%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M+    F+  A+  +++A    + P G++ V + ++I RA N      D+T HAE+  ++
Sbjct: 1   MENHEPFLREAIALSRSAVENGDEPFGSLLVKDGEVILRAENSVFTGHDMTNHAEMNLVK 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI 110
           +  +      L +  LY + EPC MC+ AI  + I R+ +  S  + G I
Sbjct: 61  LAAQHYDTAFLADCTLYTSTEPCAMCSGAIYWSGIGRMVFACSEARLGEI 110


>gi|192291626|ref|YP_001992231.1| CMP/dCMP deaminase zinc-binding [Rhodopseudomonas palustris TIE-1]
 gi|192285375|gb|ACF01756.1| CMP/dCMP deaminase zinc-binding [Rhodopseudomonas palustris TIE-1]
          Length = 214

 Score = 55.8 bits (133), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 33/99 (33%), Positives = 52/99 (52%), Gaps = 2/99 (2%)

Query: 7   FMSCALEEAQNAALRNEI--PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           +M+ A+E  + A +  +     GAV V + +++S  GN      D +AHAE+ AIR  C+
Sbjct: 64  YMTQAIELMRKAGVVEKTGGAFGAVIVRDGEVLSATGNSVLRDNDPSAHAEVNAIRAACK 123

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
            +    L    +Y + E C MC A    AR+ R++Y AS
Sbjct: 124 KVGAPNLRGATMYTSCECCPMCYATAYWARLDRIFYAAS 162


>gi|157092991|gb|ABV22150.1| cytidine/deoxycytidylate deaminase [Perkinsus chesapeaki]
          Length = 295

 Score = 55.8 bits (133), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/78 (41%), Positives = 40/78 (51%)

Query: 25  PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84
           P GA  V N   +S   N     KD T HAE+ AIR   R L +  L +  LY T EPC 
Sbjct: 42  PFGASVVHNGMPVSCGHNTVLFDKDPTCHAEVNAIRHAVRDLGRSELSDCVLYTTCEPCP 101

Query: 85  MCAAAISLARIRRLYYGA 102
           MC  AI  + ++ +Y GA
Sbjct: 102 MCWGAIMASGLKVIYVGA 119


>gi|39935973|ref|NP_948249.1| cytidine/deoxycytidylate deaminase [Rhodopseudomonas palustris
           CGA009]
 gi|39649827|emb|CAE28349.1| Cytidine/deoxycytidylate deaminase:Tat pathway signal
           [Rhodopseudomonas palustris CGA009]
          Length = 214

 Score = 55.8 bits (133), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 33/99 (33%), Positives = 52/99 (52%), Gaps = 2/99 (2%)

Query: 7   FMSCALEEAQNAALRNEI--PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           +M+ A+E  + A +  +     GAV V + +++S  GN      D +AHAE+ AIR  C+
Sbjct: 64  YMTQAIELMRKAGVVEKTGGAFGAVIVRDGEVLSATGNSVLRDNDPSAHAEVNAIRAACK 123

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
            +    L    +Y + E C MC A    AR+ R++Y AS
Sbjct: 124 KVGAPNLRGATMYTSCECCPMCYATAYWARLDRIFYAAS 162


>gi|327192975|gb|EGE59890.1| putative purine deaminase protein [Rhizobium etli CNPAF512]
          Length = 158

 Score = 55.8 bits (133), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 35/137 (25%), Positives = 61/137 (44%), Gaps = 21/137 (15%)

Query: 25  PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84
           P G+V V N ++I RA N      D+T HAE+  +++  +      L +  LY + EPC 
Sbjct: 26  PFGSVLVKNGEVILRAENSVFSGHDMTNHAEMNLVKLAAQHYDTAFLADCTLYTSTEPCA 85

Query: 85  MCAAAISLARIRRLYYGASNPKGGGI-------------ENGTQFYTLATCHHSPEIYPG 131
           MC+ AI  + I  + +  S  + G I             + G +F T+        + P 
Sbjct: 86  MCSGAIYWSGIGHMVFACSETRLGEIAGIGLNVPSRAVLQTGARFVTV--------VGPT 137

Query: 132 ISEQRSRQIIQDFFKER 148
             E  + ++ Q+F+ + 
Sbjct: 138 SLEDEAAEVHQEFWPKH 154


>gi|300786467|ref|YP_003766758.1| deaminase [Amycolatopsis mediterranei U32]
 gi|299795981|gb|ADJ46356.1| deaminase [Amycolatopsis mediterranei U32]
          Length = 160

 Score = 55.8 bits (133), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 35/93 (37%), Positives = 49/93 (52%), Gaps = 4/93 (4%)

Query: 12  LEEAQNAALRN----EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           L+EA   A RN      P GA+ V + KI+S   NR     D TAHAE++AIR  C+ L 
Sbjct: 12  LDEAVRIATRNVENGGGPFGALIVRDGKIVSTGVNRVTANLDPTAHAEVVAIRAACQELG 71

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
              L    L  + EPC MC ++   AR+ ++ +
Sbjct: 72  TFKLDGCVLVSSCEPCPMCLSSALWARVDKVLF 104


>gi|84497975|ref|ZP_00996772.1| putative deaminase [Janibacter sp. HTCC2649]
 gi|84381475|gb|EAP97358.1| putative deaminase [Janibacter sp. HTCC2649]
          Length = 158

 Score = 55.8 bits (133), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 28/71 (39%), Positives = 38/71 (53%)

Query: 25 PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84
          P GAV V    +I    NR     D TAHAE++A+R  CR +    LP   +Y + EPC 
Sbjct: 25 PFGAVVVRGGDVIGEGTNRVTLDLDPTAHAEVVALRNACREVGDFSLPGATVYASCEPCP 84

Query: 85 MCAAAISLARI 95
          +C +A   AR+
Sbjct: 85 LCLSASLWARV 95


>gi|262042008|ref|ZP_06015188.1| conserved hypothetical protein [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
 gi|259040626|gb|EEW41717.1| conserved hypothetical protein [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
          Length = 152

 Score = 55.8 bits (133), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 29/83 (34%), Positives = 47/83 (56%)

Query: 25  PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84
           P GAV V N++I++ + N      + TAHAE+ A+R     L   +L E  +Y + +PC 
Sbjct: 25  PFGAVLVRNDEIVAESVNTFHLSGEPTAHAELNAVRDLAARLGSAVLRECVIYASGQPCP 84

Query: 85  MCAAAISLARIRRLYYGASNPKG 107
           MC +A+ L  +R +++  SN  G
Sbjct: 85  MCLSALYLTGVREVFFANSNQDG 107


>gi|116326904|ref|YP_796624.1| cytosine/adenosine deaminase [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116332428|ref|YP_802146.1| cytosine/adenosine deaminase [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
 gi|116119648|gb|ABJ77691.1| Cytosine/adenosine deaminase [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116126117|gb|ABJ77388.1| Cytosine/adenosine deaminase [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
          Length = 155

 Score = 55.8 bits (133), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 39/129 (30%), Positives = 60/129 (46%), Gaps = 2/129 (1%)

Query: 21  RNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80
           R E+P         ++IS   N   +  D + H+EIL IR   + L    L +  L  +L
Sbjct: 25  REEVPSFTRIYQKEELISETFNEVEKHLDSSFHSEILCIRDAKKKLKTRYLTDCTLITSL 84

Query: 81  EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140
           EPC MC   I L+RI ++ Y     +G GI +      + + +  PE+   I  + S+  
Sbjct: 85  EPCLMCTGTILLSRIPKIIYLLPARQGEGI-SSLSIEMIYSRNFFPELI-CIPAEISKNA 142

Query: 141 IQDFFKERR 149
            + FFK RR
Sbjct: 143 FKSFFKIRR 151


>gi|303328437|ref|ZP_07358874.1| zinc-binding domain protein [Desulfovibrio sp. 3_1_syn3]
 gi|302861431|gb|EFL84368.1| zinc-binding domain protein [Desulfovibrio sp. 3_1_syn3]
          Length = 90

 Score = 55.8 bits (133), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 29/90 (32%), Positives = 46/90 (51%)

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
           R G   L    L    L VTLEPC MCAAA+  AR+  + YGA++   G + +  ++   
Sbjct: 1   RAGGAALGNYRLAGCVLAVTLEPCAMCAAALVHARLAGVVYGAADDLAGAVISRAEYLDA 60

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             C+H      G+  +    +++DFF+ +R
Sbjct: 61  PFCNHRVWHMGGVRAEACAALLRDFFERKR 90


>gi|46447463|ref|YP_008828.1| hypothetical protein pc1829 [Candidatus Protochlamydia amoebophila
           UWE25]
 gi|46401104|emb|CAF24553.1| conserved hypothetical protein [Candidatus Protochlamydia
           amoebophila UWE25]
          Length = 156

 Score = 55.8 bits (133), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 44/144 (30%), Positives = 63/144 (43%), Gaps = 4/144 (2%)

Query: 7   FMSCALEEAQNAALRNEI-PVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           +M  A+E A     ++E  P GA  V    +I++   N   + +D T HAE+  IR   R
Sbjct: 4   YMRRAIESAYEGIDKDEGGPFGACIVDKQGQILAVTHNTVLKDQDPTCHAEMNCIREAAR 63

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGG--GIENGTQFYTLATC 122
            L   IL    L+ T EPC MC AAI  ARI ++Y G         G ++   +  L   
Sbjct: 64  RLKTHILSGYTLFTTAEPCPMCLAAIYWARIEKVYIGVKKECAARYGFDDAFFYEQLLLP 123

Query: 123 HHSPEIYPGISEQRSRQIIQDFFK 146
               E+        S+Q  + F K
Sbjct: 124 PEKREVLATFDPDSSKQCEEIFVK 147


>gi|218663270|ref|ZP_03519200.1| CMP/dCMP deaminase zinc-binding protein [Rhizobium etli IE4771]
          Length = 157

 Score = 55.8 bits (133), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 31/110 (28%), Positives = 54/110 (49%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M+    F+  A+  +++A    + P G+V V +  +I RA N      D+T HAE+  ++
Sbjct: 1   MENHEPFLREAIALSKSAMANGDEPFGSVLVRDGDVILRAENSVFTGHDMTNHAEMNLVK 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI 110
           +  +      L +  LY + EPC MC+ AI  + I  + +  S  + G I
Sbjct: 61  LAAKHYDPAFLADCTLYTSTEPCAMCSGAIYWSGIGHMVFACSETRLGEI 110


>gi|254411343|ref|ZP_05025120.1| Cytidine and deoxycytidylate deaminase zinc-binding region domain
           protein [Microcoleus chthonoplastes PCC 7420]
 gi|196181844|gb|EDX76831.1| Cytidine and deoxycytidylate deaminase zinc-binding region domain
           protein [Microcoleus chthonoplastes PCC 7420]
          Length = 143

 Score = 55.8 bits (133), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 34/105 (32%), Positives = 52/105 (49%), Gaps = 3/105 (2%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM+ A+ +A+       IP+G+V V   +II +  N+  +  D   HAEI  +R   RI 
Sbjct: 4   FMAAAIAQAKQGLREGGIPIGSVLVKEGQIIGQGYNKRVQDNDPVTHAEIDCLRHAGRIG 63

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIE 111
           +     +  LY TL PC +CA A+    I+++  G S    G  E
Sbjct: 64  N---YNDTILYSTLMPCYLCAGAVVQFGIKKVIAGESQTFAGARE 105


>gi|115377134|ref|ZP_01464348.1| riboflavin biosynthesis protein RibD [Stigmatella aurantiaca
           DW4/3-1]
 gi|310822848|ref|YP_003955206.1| Riboflavin biosynthesis protein RibD [Stigmatella aurantiaca
           DW4/3-1]
 gi|115365843|gb|EAU64864.1| riboflavin biosynthesis protein RibD [Stigmatella aurantiaca
           DW4/3-1]
 gi|309395920|gb|ADO73379.1| Riboflavin biosynthesis protein RibD [Stigmatella aurantiaca
           DW4/3-1]
          Length = 387

 Score = 55.8 bits (133), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 54/151 (35%), Positives = 71/151 (47%), Gaps = 27/151 (17%)

Query: 7   FMSCALEEAQNAALRNEI--PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM-GC 63
           FM  ALEEA     R      VGAV V   +II+R  ++    K  TAHAE++A+   G 
Sbjct: 31  FMRIALEEAAKGLGRTSPNPAVGAVLVKGGRIIARGYHK----KAGTAHAEVVALEAAGP 86

Query: 64  RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGAS--NPKGGGIENGTQ 115
           R          DLY TLEPC        C+ AI  A +RR+  G+S  NPK     NG  
Sbjct: 87  RARG------ADLYTTLEPCDHYGRTGPCSQAIIDAGVRRVICGSSDPNPK----VNGKG 136

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
              L       E+  G+ ++ + Q+ Q FFK
Sbjct: 137 VARLKKA--GVEVLTGVLQKDADQLNQPFFK 165


>gi|220913945|ref|YP_002489254.1| CMP/dCMP deaminase zinc-binding [Arthrobacter chlorophenolicus A6]
 gi|219860823|gb|ACL41165.1| CMP/dCMP deaminase zinc-binding [Arthrobacter chlorophenolicus A6]
          Length = 164

 Score = 55.8 bits (133), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 33/97 (34%), Positives = 47/97 (48%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           F++ ++  A    L +  P GA+ V  +       NR     D TAHAE+ AIR  CR +
Sbjct: 10  FLARSIRLATANVLNSGGPFGAMIVTADGKTFDGVNRVTADNDPTAHAEVTAIRTACREM 69

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
               L    LY + EPC MC A+   AR+ R+ + A 
Sbjct: 70  GTFDLSGAVLYTSCEPCPMCLASALWARVERVVFAAD 106


>gi|116075283|ref|ZP_01472543.1| hypothetical protein RS9916_27024 [Synechococcus sp. RS9916]
 gi|116067480|gb|EAU73234.1| hypothetical protein RS9916_27024 [Synechococcus sp. RS9916]
          Length = 159

 Score = 55.8 bits (133), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 29/79 (36%), Positives = 42/79 (53%)

Query: 25  PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84
           P GAV   + ++++ AGN      D +AHAE+ AIR  C+ L    L    +Y + E C 
Sbjct: 29  PFGAVVAKDGEVVAAAGNSVVRDLDPSAHAEVNAIRAACKKLGTWDLSGCVMYTSCECCP 88

Query: 85  MCAAAISLARIRRLYYGAS 103
           MC A    A IR ++Y A+
Sbjct: 89  MCYATAYWAGIRTVFYAAA 107


>gi|332308193|ref|YP_004436044.1| CMP/dCMP deaminase zinc-binding protein [Glaciecola agarilytica
           4H-3-7+YE-5]
 gi|332175522|gb|AEE24776.1| CMP/dCMP deaminase zinc-binding protein [Glaciecola agarilytica
           4H-3-7+YE-5]
          Length = 145

 Score = 55.8 bits (133), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 31/95 (32%), Positives = 46/95 (48%), Gaps = 1/95 (1%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  A++EA+       IP+G+V V  ++II R  NR  +      H E+ A+    R  
Sbjct: 4   FMQAAIDEAKQGLAEGGIPIGSVLVYQDEIIGRGHNRRVQSGSPILHGEMDALENAGR-Q 62

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
              +     LY TL PC+MC+  I L  I ++  G
Sbjct: 63  PASVYKASTLYTTLSPCSMCSGTILLYGIPKVVIG 97


>gi|257067810|ref|YP_003154065.1| cytosine/adenosine deaminase [Brachybacterium faecium DSM 4810]
 gi|256558628|gb|ACU84475.1| cytosine/adenosine deaminase [Brachybacterium faecium DSM 4810]
          Length = 158

 Score = 55.8 bits (133), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 33/90 (36%), Positives = 43/90 (47%)

Query: 11  ALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEI 70
           A+E A  +  R   P GAV +  +       NR     D TAHAE+ AIR  CR      
Sbjct: 13  AVELAVASVARGGGPFGAVVLTADGTAVEGANRVTAAHDPTAHAEVEAIREACRRSGSHE 72

Query: 71  LPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
           L    LY + EPC MC A+   AR+ R+ +
Sbjct: 73  LRGAVLYASCEPCPMCLASALWARVERVEF 102


>gi|218460046|ref|ZP_03500137.1| CMP/dCMP deaminase zinc-binding protein [Rhizobium etli Kim 5]
          Length = 187

 Score = 55.8 bits (133), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 31/110 (28%), Positives = 54/110 (49%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M+    F+  A+  +++A    + P G+V V +  +I RA N      D+T HAE+  ++
Sbjct: 1   MENHEPFLREAIALSKSAMANGDEPFGSVLVRDGDVILRAENSVFTGHDMTNHAEMNLVK 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI 110
           +  +      L +  LY + EPC MC+ AI  + I  + +  S  + G I
Sbjct: 61  LAAKHYDPAFLADCTLYTSTEPCAMCSGAIYWSGIGHMVFACSETRLGEI 110


>gi|254773714|ref|ZP_05215230.1| cytidine/deoxycytidylate deaminase [Mycobacterium avium subsp.
          avium ATCC 25291]
          Length = 177

 Score = 55.8 bits (133), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 26/66 (39%), Positives = 37/66 (56%)

Query: 25 PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84
          P   V V + ++++ + N+  +  D TAHAEILAIR  C  L  E L +  +YV   PC 
Sbjct: 33 PFATVIVQDGEVLAESANKAAQTNDPTAHAEILAIRAACLKLGTEHLVDATIYVLAHPCP 92

Query: 85 MCAAAI 90
          MC  A+
Sbjct: 93 MCLGAL 98


>gi|32473097|ref|NP_866091.1| cytidine and deoxycytidylate deaminase family protein
           [Rhodopirellula baltica SH 1]
 gi|32397776|emb|CAD73777.1| probable cytidine and deoxycytidylate deaminase family protein
           [Rhodopirellula baltica SH 1]
          Length = 165

 Score = 55.8 bits (133), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/75 (42%), Positives = 42/75 (56%), Gaps = 8/75 (10%)

Query: 29  VAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAA 88
           +AV +N+++SR         D TAHAE++AI    + L    L  + L  T EPC MC A
Sbjct: 46  IAVAHNQVVSRC--------DPTAHAEVMAIGKAAKKLGDPDLSGLWLVSTGEPCPMCLA 97

Query: 89  AISLARIRRLYYGAS 103
           AI LA I  + YGAS
Sbjct: 98  AIGLAGIEHVAYGAS 112


>gi|41406760|ref|NP_959596.1| hypothetical protein MAP0662c [Mycobacterium avium subsp.
          paratuberculosis K-10]
 gi|118463808|ref|YP_880050.1| cytidine/deoxycytidylate deaminase [Mycobacterium avium 104]
 gi|41395110|gb|AAS02979.1| hypothetical protein MAP_0662c [Mycobacterium avium subsp.
          paratuberculosis K-10]
 gi|118165095|gb|ABK65992.1| cytidine/deoxycytidylate deaminase [Mycobacterium avium 104]
          Length = 166

 Score = 55.8 bits (133), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 26/66 (39%), Positives = 37/66 (56%)

Query: 25 PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84
          P   V V + ++++ + N+  +  D TAHAEILAIR  C  L  E L +  +YV   PC 
Sbjct: 22 PFATVIVQDGEVLAESANKAAQTNDPTAHAEILAIRAACLKLGTEHLVDATIYVLAHPCP 81

Query: 85 MCAAAI 90
          MC  A+
Sbjct: 82 MCLGAL 87


>gi|119386956|ref|YP_918011.1| CMP/dCMP deaminase, zinc-binding [Paracoccus denitrificans PD1222]
 gi|119377551|gb|ABL72315.1| CMP/dCMP deaminase, zinc-binding protein [Paracoccus denitrificans
           PD1222]
          Length = 157

 Score = 55.8 bits (133), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 37/115 (32%), Positives = 57/115 (49%), Gaps = 6/115 (5%)

Query: 12  LEEAQNAALRN----EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           LE+A   A RN      P GAV V + ++++   N      D TAHAE++A+R     L 
Sbjct: 9   LEQAVMLAHRNVQAGGRPFGAVVVRDGEVLATGVNETVATHDPTAHAELVALRAAALRLG 68

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGG--GIENGTQFYTLA 120
              L    ++ + +PC MC AA+ LA + +++Y  SN  G   G+     +  LA
Sbjct: 69  SPDLSACVVHASGQPCPMCLAAMRLAGVTKVHYAYSNQDGAPYGLSTAALYEELA 123


>gi|302873074|ref|YP_003841707.1| CMP/dCMP deaminase zinc-binding [Clostridium cellulovorans 743B]
 gi|307688768|ref|ZP_07631214.1| CMP/dCMP deaminase zinc-binding protein [Clostridium cellulovorans
           743B]
 gi|302575931|gb|ADL49943.1| CMP/dCMP deaminase zinc-binding [Clostridium cellulovorans 743B]
          Length = 167

 Score = 55.5 bits (132), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 43/160 (26%), Positives = 69/160 (43%), Gaps = 41/160 (25%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  ALE  + +  + E+PVGAV    ++II RA +     +    HAE+           
Sbjct: 7   MRIALEIGKKSLEQGELPVGAVIFKGDEIIGRAYSSGESKQQFLRHAEM----------- 55

Query: 68  QEILPEVD-------------LYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI---- 110
            ++L EVD             L+VTLEPC MC  A   A I  +YY   +P  G +    
Sbjct: 56  -KVLWEVDEQGYSVRDRKNMQLFVTLEPCMMCLGAAMGAFIGEIYYSVPSPIDGAVALAE 114

Query: 111 ----ENGTQF--YTLATCHHSPEIYPGISEQRSRQIIQDF 144
                N  +   YTL  C      + G+ ++  +++++ +
Sbjct: 115 SSLNSNNVEIPSYTLPKC------FGGVLQEEGKELLKRY 148


>gi|325958148|ref|YP_004289614.1| Cytosine deaminase [Methanobacterium sp. AL-21]
 gi|325329580|gb|ADZ08642.1| Cytosine deaminase [Methanobacterium sp. AL-21]
          Length = 157

 Score = 55.5 bits (132), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 37/117 (31%), Positives = 56/117 (47%), Gaps = 5/117 (4%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  AL+EA+ +     IP+GA+ V +  I+ R  N   +      HAE+  I    R+ 
Sbjct: 13  FMMEALKEAKKSLESGGIPIGAILVKDGVIVGRGHNNLLQKNSTILHAEMDCIENSGRLK 72

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS----NPKGGGIENGTQFYTL 119
            ++      LY TL PC MC+  I L +I R+  G +     P+   IE+G +   L
Sbjct: 73  GKD-YKRSTLYTTLSPCEMCSGTIILYKISRVVIGENENLKGPEKCLIESGIELKNL 128


>gi|319795234|ref|YP_004156874.1| cmp/dcmp deaminase zinc-binding protein [Variovorax paradoxus EPS]
 gi|315597697|gb|ADU38763.1| CMP/dCMP deaminase zinc-binding protein [Variovorax paradoxus EPS]
          Length = 176

 Score = 55.5 bits (132), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 31/79 (39%), Positives = 45/79 (56%), Gaps = 2/79 (2%)

Query: 25  PVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIR-MGCRILSQEILPEVDLYVTLEP 82
           P G+V V  + ++++ A N   E  D T HAE  AIR +  R +S++ L    LY + EP
Sbjct: 43  PFGSVIVSADGEVLAEAYNNTGETGDCTGHAETNAIRALAGRGISRDTLAGATLYASGEP 102

Query: 83  CTMCAAAISLARIRRLYYG 101
           C MCA AI  + I R+ +G
Sbjct: 103 CVMCAGAIFWSNIGRVVFG 121


>gi|242280630|ref|YP_002992759.1| CMP/dCMP deaminase zinc-binding [Desulfovibrio salexigens DSM 2638]
 gi|242123524|gb|ACS81220.1| CMP/dCMP deaminase zinc-binding [Desulfovibrio salexigens DSM 2638]
          Length = 145

 Score = 55.5 bits (132), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 33/102 (32%), Positives = 50/102 (49%), Gaps = 3/102 (2%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  A + A+ +  +  +P+G+V V + KII    N+  +  D  AH E+  IR   R  
Sbjct: 6   FMEEAYKLAKKSFDQGGLPIGSVLVRDGKIIGSGHNQRVQKGDPIAHGEMDCIRNAGR-- 63

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGG 108
            Q+   +  +Y TL PC MC+  I    I R+  G +   GG
Sbjct: 64  -QKTYKDTTIYTTLSPCMMCSGTIVQFGISRVVIGENRNFGG 104


>gi|218778327|ref|YP_002429645.1| CMP/dCMP deaminase zinc-binding [Desulfatibacillum alkenivorans
           AK-01]
 gi|218759711|gb|ACL02177.1| CMP/dCMP deaminase zinc-binding [Desulfatibacillum alkenivorans
           AK-01]
          Length = 169

 Score = 55.5 bits (132), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 43/147 (29%), Positives = 67/147 (45%), Gaps = 12/147 (8%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDV--TAHAEILAIRMGCR 64
           FM+ ALE A+ A    E PVG + V + ++I++               HAE++A+    R
Sbjct: 6   FMNKALELARQALEAGEFPVGCILVHDGRVIAQGARVGVAGGGTGELEHAEMVAM---AR 62

Query: 65  ILSQEILP---EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
             + E  P   EV +Y T+EPC MC  A+ +  I ++ Y   +  GGG        TL  
Sbjct: 63  FENMENAPPPSEVTIYCTMEPCLMCFGALMIHGITKIVYAYEDAMGGG--TALDRSTLPP 120

Query: 122 CHHSP--EIYPGISEQRSRQIIQDFFK 146
            +     EI P +   +S  + + FF 
Sbjct: 121 LYRDAEVEITPHVGRSQSLALFKAFFS 147


>gi|268611450|ref|ZP_06145177.1| putative Cytidine/deoxycytidylate deaminase, zinc-binding region
           (CMP/dCMP deaminase, zinc-binding) protein [Ruminococcus
           flavefaciens FD-1]
          Length = 211

 Score = 55.5 bits (132), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 39/115 (33%), Positives = 59/115 (51%), Gaps = 7/115 (6%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGA-VAVLNNKIISRAGNRNRE---LKDVTAHAEI 56
            K  +V     LEEA  A     IPVGA V   + +++ +  NR  E   L   TAHAE+
Sbjct: 2   WKDISVQWQTVLEEAWTAFTSGSIPVGAAVFSKDGELLVKDHNRRNEPGTLNPRTAHAEL 61

Query: 57  LAIR-MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI 110
             I+ + CR      + E +LY ++EPC MC  AI ++ I+ L+ G+ +   G +
Sbjct: 62  NVIQHIDCRYGLN--IRETELYTSMEPCPMCMGAIVMSNIKHLHCGSHDRWCGAL 114


>gi|116671966|ref|YP_832899.1| CMP/dCMP deaminase, zinc-binding [Arthrobacter sp. FB24]
 gi|116612075|gb|ABK04799.1| CMP/dCMP deaminase, zinc-binding protein [Arthrobacter sp. FB24]
          Length = 164

 Score = 55.5 bits (132), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 31/79 (39%), Positives = 38/79 (48%)

Query: 25  PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84
           P GAV V  +       NR     D TAHAE+ AIR  C  L    L    LY + EPC 
Sbjct: 28  PFGAVVVTADGQSFGGVNRVTATNDPTAHAEVTAIRRACSELGTFDLTGATLYTSCEPCP 87

Query: 85  MCAAAISLARIRRLYYGAS 103
           MC A+   AR+ R+ + A 
Sbjct: 88  MCLASALWARVERVVFAAD 106


>gi|51246206|ref|YP_066090.1| cytosine deaminase [Desulfotalea psychrophila LSv54]
 gi|50877243|emb|CAG37083.1| probable cytosine deaminase [Desulfotalea psychrophila LSv54]
          Length = 145

 Score = 55.5 bits (132), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/95 (32%), Positives = 49/95 (51%), Gaps = 1/95 (1%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           F + A+ EA+       IP+G+V V++ +I+ R  N+  +   V  HAE+  +    RI 
Sbjct: 4   FFAVAVAEARKGMATGGIPIGSVLVIDGQIVGRGHNQRVQRGSVVLHAEMDCLENAGRIK 63

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
           + +      LY TL PC MC+ A+ L  I R+  G
Sbjct: 64  AAD-YRRATLYSTLSPCDMCSGAVLLYGIPRVVIG 97


>gi|223938524|ref|ZP_03630416.1| Cytosine deaminase [bacterium Ellin514]
 gi|223892786|gb|EEF59255.1| Cytosine deaminase [bacterium Ellin514]
          Length = 145

 Score = 55.5 bits (132), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 32/97 (32%), Positives = 47/97 (48%), Gaps = 1/97 (1%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           + F+  A+EEA+       IP+G+V V   KII R  N+  +   V  HAE+  +    R
Sbjct: 2   DTFLQAAIEEAKKGLAAGGIPIGSVLVYEGKIIGRGHNQRVQHGSVIHHAEMNCLENSGR 61

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
                +  +  LY TL PC MC+ A  L +I  +  G
Sbjct: 62  -QKASVYQKCTLYSTLSPCPMCSGAALLYKIPHVIVG 97


>gi|188591891|ref|YP_001796489.1| guanine deaminase [Cupriavidus taiwanensis LMG 19424]
 gi|170938265|emb|CAP63250.1| Guanine deaminase [Cupriavidus taiwanensis LMG 19424]
          Length = 145

 Score = 55.5 bits (132), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 29/84 (34%), Positives = 45/84 (53%)

Query: 21  RNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80
           R   P GAV VL+ ++++   N      D T HAE+ A+R   R L +  L    +Y + 
Sbjct: 14  RGARPFGAVLVLDGEVVATGVNDIVHSHDPTTHAEMEAVRAAARKLGRPDLRGSVVYASG 73

Query: 81  EPCTMCAAAISLARIRRLYYGASN 104
            PC MC AA+++A ++ +YY   N
Sbjct: 74  HPCPMCLAAMTMAGVQAVYYAFDN 97


>gi|45185761|ref|NP_983477.1| ACR075Cp [Ashbya gossypii ATCC 10895]
 gi|44981516|gb|AAS51301.1| ACR075Cp [Ashbya gossypii ATCC 10895]
          Length = 245

 Score = 55.5 bits (132), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 42/113 (37%), Positives = 60/113 (53%), Gaps = 9/113 (7%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVL--NNKIISRAGNR-NRELKDVTAHAEILAIRMGCR 64
           M  A+  A+ A    E PV  V V   +++II+   N  NR L  + AHAE  AI     
Sbjct: 8   MRTAIRLARYALDHGETPVACVFVHTPSDQIIAYGMNDTNRSLTGI-AHAEFGAIAQVQE 66

Query: 65  ILSQE---ILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           +  ++   I  EV +YVT+EPC MCA+A+    I R+ +G  N + GG  NG+
Sbjct: 67  LFGEQDASIFKEVTVYVTVEPCVMCASALKQLGIGRVIFGCGNERFGG--NGS 117


>gi|268589808|ref|ZP_06124029.1| tRNA-specific adenosine deaminase [Providencia rettgeri DSM 1131]
 gi|291314796|gb|EFE55249.1| tRNA-specific adenosine deaminase [Providencia rettgeri DSM 1131]
          Length = 157

 Score = 55.5 bits (132), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 36/127 (28%), Positives = 58/127 (45%), Gaps = 6/127 (4%)

Query: 25  PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84
           P GAV V +N+++    N      D T HAE+  IR  C       L E  LY + EPC 
Sbjct: 29  PFGAVLVKDNQVVMTGENHIHTESDPTYHAELGLIRQYCSEHKIMNLSEYTLYTSCEPCC 88

Query: 85  MCAAAISLARIRRLYYGASNPK-----GGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139
           MC+ A+   ++ R+ Y  S+ +     G  I  G+     A     P +  G+ ++++  
Sbjct: 89  MCSGAMVWCQLGRMVYSLSHDELAEIAGFNIMLGSD-EIFAKSPFKPAVTHGVLKEKAML 147

Query: 140 IIQDFFK 146
           I   +F+
Sbjct: 148 IYTQYFQ 154


>gi|192360046|ref|YP_001980851.1| cytosine deaminase [Cellvibrio japonicus Ueda107]
 gi|190686211|gb|ACE83889.1| cytosine deaminase [Cellvibrio japonicus Ueda107]
          Length = 146

 Score = 55.5 bits (132), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 30/95 (31%), Positives = 48/95 (50%), Gaps = 1/95 (1%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  ALEEA+       IP+G+V V++ +I+ R  N+  +      HAE+  +    R+ 
Sbjct: 5   FMQAALEEARKGRREGGIPIGSVLVIDGRIVGRGHNQRVQKGSCVLHAEMDCLENAGRLK 64

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
           + +      LY TL PC MC+  + L  I ++  G
Sbjct: 65  ASD-YRRATLYSTLSPCDMCSGTVLLYGIPKVVVG 98


>gi|317486652|ref|ZP_07945469.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Bilophila wadsworthia 3_1_6]
 gi|316922035|gb|EFV43304.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Bilophila wadsworthia 3_1_6]
          Length = 116

 Score = 55.5 bits (132), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 28/59 (47%), Positives = 35/59 (59%)

Query: 46  ELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASN 104
           E  D TAHAEI+AIR   + L Q  L + +L+ T EPC  C AA   A I R+YYG + 
Sbjct: 4   ETLDPTAHAEIVAIRNATQKLGQLDLSDCELFTTCEPCPQCLAATYWAGISRIYYGITQ 62


>gi|325677177|ref|ZP_08156843.1| guanine deaminase [Rhodococcus equi ATCC 33707]
 gi|325551874|gb|EGD21570.1| guanine deaminase [Rhodococcus equi ATCC 33707]
          Length = 156

 Score = 55.1 bits (131), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 27/66 (40%), Positives = 37/66 (56%)

Query: 25 PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84
          P  AV V + ++++ + NR  +  D TAHAEILAIR  C  L  E L    +YV   PC 
Sbjct: 21 PFAAVIVKDGEVLAESPNRVAQTGDPTAHAEILAIRQACTELGTEHLTGTTIYVLAHPCP 80

Query: 85 MCAAAI 90
          MC  ++
Sbjct: 81 MCLGSL 86


>gi|284054867|ref|ZP_06385077.1| tRNA-adenosine deaminase [Arthrospira platensis str. Paraca]
          Length = 87

 Score = 55.1 bits (131), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 33/77 (42%), Positives = 43/77 (55%), Gaps = 1/77 (1%)

Query: 7  FMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
          +M  AL+    A    E+PVGA+ V    K+I++  NR     D TAHAEI+A+R   +I
Sbjct: 11 WMQQALKLGAAAGEAGEVPVGALIVNQQGKLIAQGENRRERDPDPTAHAEIIALRQASQI 70

Query: 66 LSQEILPEVDLYVTLEP 82
          L    L    LYVTLEP
Sbjct: 71 LGDWHLNTCTLYVTLEP 87


>gi|218516430|ref|ZP_03513270.1| putative purine deaminase protein [Rhizobium etli 8C-3]
          Length = 158

 Score = 55.1 bits (131), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 28/86 (32%), Positives = 44/86 (51%)

Query: 25  PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84
           P G+V V N ++I RA N      D+T HAE+  +++  +      L +  LY + EPC 
Sbjct: 26  PFGSVLVKNGEVILRAENSVFSGHDMTNHAEMNLVKLAAQHYDTAFLADCTLYTSTEPCA 85

Query: 85  MCAAAISLARIRRLYYGASNPKGGGI 110
           MC+ AI  + I  + +  S  + G I
Sbjct: 86  MCSGAIYWSGIGHMVFACSETRLGEI 111


>gi|19923945|ref|NP_612431.1| tRNA-specific adenosine deaminase-like protein 3 [Homo sapiens]
 gi|74731634|sp|Q96EY9|ADAT3_HUMAN RecName: Full=tRNA-specific adenosine deaminase-like protein 3;
           AltName: Full=tRNA-specific adenosine-34 deaminase
           subunit ADAT3
 gi|15080093|gb|AAH11824.1| Adenosine deaminase, tRNA-specific 3, TAD3 homolog (S. cerevisiae)
           [Homo sapiens]
          Length = 351

 Score = 55.1 bits (131), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 29/71 (40%), Positives = 43/71 (60%), Gaps = 5/71 (7%)

Query: 75  DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF--YTLATCHHSPEIYPGI 132
           DLYVT EPC MCA A+  ARI R++YGA +P G     GT+F  +     +H  +++ G+
Sbjct: 283 DLYVTREPCAMCAMALVHARILRVFYGAPSPDGA---LGTRFRIHARPDLNHRFQVFRGV 339

Query: 133 SEQRSRQIIQD 143
            E++ R +  D
Sbjct: 340 LEEQCRWLDPD 350


>gi|332851042|ref|XP_003316032.1| PREDICTED: tRNA-specific adenosine deaminase-like protein 3 [Pan
           troglodytes]
          Length = 367

 Score = 55.1 bits (131), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 29/71 (40%), Positives = 43/71 (60%), Gaps = 5/71 (7%)

Query: 75  DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF--YTLATCHHSPEIYPGI 132
           DLYVT EPC MCA A+  ARI R++YGA +P G     GT+F  +     +H  +++ G+
Sbjct: 299 DLYVTREPCAMCAMALVHARILRVFYGAPSPDGA---LGTRFRIHARPDLNHRFQVFRGV 355

Query: 133 SEQRSRQIIQD 143
            E++ R +  D
Sbjct: 356 LEEQCRWLDPD 366


>gi|119589840|gb|EAW69434.1| hCG22695, isoform CRA_a [Homo sapiens]
 gi|119589842|gb|EAW69436.1| hCG22695, isoform CRA_a [Homo sapiens]
 gi|119589844|gb|EAW69438.1| hCG22695, isoform CRA_a [Homo sapiens]
          Length = 367

 Score = 55.1 bits (131), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 29/71 (40%), Positives = 43/71 (60%), Gaps = 5/71 (7%)

Query: 75  DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF--YTLATCHHSPEIYPGI 132
           DLYVT EPC MCA A+  ARI R++YGA +P G     GT+F  +     +H  +++ G+
Sbjct: 299 DLYVTREPCAMCAMALVHARILRVFYGAPSPDGA---LGTRFRIHARPDLNHRFQVFRGV 355

Query: 133 SEQRSRQIIQD 143
            E++ R +  D
Sbjct: 356 LEEQCRWLDPD 366


>gi|190893255|ref|YP_001979797.1| purine deaminase [Rhizobium etli CIAT 652]
 gi|190698534|gb|ACE92619.1| putative purine deaminase protein [Rhizobium etli CIAT 652]
          Length = 158

 Score = 54.7 bits (130), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 28/86 (32%), Positives = 44/86 (51%)

Query: 25  PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84
           P G+V V N ++I RA N      D+T HAE+  +++  +      L +  LY + EPC 
Sbjct: 26  PFGSVLVKNGEVILRAENSVFSGHDMTNHAEMNLVKLAAQHYDTAFLADCTLYTSTEPCA 85

Query: 85  MCAAAISLARIRRLYYGASNPKGGGI 110
           MC+ AI  + I  + +  S  + G I
Sbjct: 86  MCSGAIYWSGIGHMVFACSETRLGEI 111


>gi|82701279|ref|YP_410845.1| cytidine/deoxycytidylate deaminase, zinc-binding region
           [Nitrosospira multiformis ATCC 25196]
 gi|82409344|gb|ABB73453.1| Cytidine/deoxycytidylate deaminase, zinc-binding region
           [Nitrosospira multiformis ATCC 25196]
          Length = 147

 Score = 54.7 bits (130), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 33/104 (31%), Positives = 50/104 (48%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M +   F+  A+  A+N   R   P  AV V+  + +S   N   +  D T HAE+ A+R
Sbjct: 1   MSQHETFLREAVRLAKNNRERGSRPFAAVLVVEGQAVSTGVNDVVQSNDPTTHAEMEAVR 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASN 104
              R L +  L    +Y +  PC MC AA+ +A +  +YY   N
Sbjct: 61  AASRKLGRPDLRGSIVYASGHPCPMCLAAMVIAGVDAVYYAFDN 104


>gi|210076069|ref|XP_505753.2| YALI0F22517p [Yarrowia lipolytica]
 gi|199424977|emb|CAG78564.2| YALI0F22517p [Yarrowia lipolytica]
          Length = 150

 Score = 54.7 bits (130), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 30/104 (28%), Positives = 54/104 (51%), Gaps = 2/104 (1%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNN-KIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           +M+ A+E+A  +     IP+GAV V  +  ++ +  NR  +      H EI A++   R 
Sbjct: 8   YMAMAIEQATKSKNEGGIPIGAVLVAGDGTVLGKGHNRRIQHGSAVHHGEIDALQNAGR- 66

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109
           L+ ++  +  +Y TL PC MC  A  +  ++R+  G ++   GG
Sbjct: 67  LAGKVYKDATMYTTLSPCDMCTGACIMFGVKRVVMGENDTFVGG 110


>gi|332285213|ref|YP_004417124.1| cytosine deaminase [Pusillimonas sp. T7-7]
 gi|330429166|gb|AEC20500.1| cytosine deaminase [Pusillimonas sp. T7-7]
          Length = 145

 Score = 54.7 bits (130), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 35/103 (33%), Positives = 47/103 (45%), Gaps = 1/103 (0%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  A++EA+       IP+G+V V    II R  NR  +      H E+ A+    R  
Sbjct: 4   FMKAAIQEARLGLQEGGIPIGSVLVHQGTIIGRGHNRRVQCGSTILHGEMDALENAGR-Q 62

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109
              +  E  LY TL PC MC  AI L  I ++  G +    GG
Sbjct: 63  PASVYRESVLYTTLSPCPMCTGAILLYGIPKVVIGENQTFMGG 105


>gi|114765713|ref|ZP_01444811.1| putative deaminase [Pelagibaca bermudensis HTCC2601]
 gi|114541930|gb|EAU44965.1| putative deaminase [Roseovarius sp. HTCC2601]
          Length = 152

 Score = 54.7 bits (130), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 38/123 (30%), Positives = 57/123 (46%), Gaps = 4/123 (3%)

Query: 22  NEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80
            E PV   AVL  +++++ + N   E  D + HAEI+AI    R L    L    L  ++
Sbjct: 25  GEGPVFTAAVLRGDEVLALSANEVSERCDASRHAEIVAIETASRKLGSTKLDGCTLIASM 84

Query: 81  EPCTMCAAAISLARIRRLYYGASN---PKGGGIENGTQFYTLATCHHSPEIYPGISEQRS 137
           +PC MC AA+  A I RL +  +    P      N T       C H+ + + G+  +R 
Sbjct: 85  QPCEMCLAAMRWAGIDRLVFAMTQELAPTFFQFPNLTIADYARACDHAFDWHGGLGAERL 144

Query: 138 RQI 140
            QI
Sbjct: 145 NQI 147


>gi|53804620|ref|YP_113769.1| cytosine deaminase [Methylococcus capsulatus str. Bath]
 gi|53758381|gb|AAU92672.1| cytosine deaminase [Methylococcus capsulatus str. Bath]
          Length = 145

 Score = 54.7 bits (130), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 38/125 (30%), Positives = 57/125 (45%), Gaps = 18/125 (14%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           ++++  A+ EA+       IP+G+V V++ +I+ R  NR  +      HAE+  +    R
Sbjct: 2   DIYLQAAIAEARKGLEEGGIPIGSVLVIDGEIVGRGRNRRVQKGSAILHAEMDCLENAGR 61

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
           + + E      LY TL PC MC+ AI L  I R+  G         EN T         H
Sbjct: 62  LSAAE-YRRATLYSTLSPCDMCSGAILLYGIPRVVAG---------ENRT--------FH 103

Query: 125 SPEIY 129
            PE Y
Sbjct: 104 GPETY 108


>gi|32455816|ref|NP_862468.1| hypothetical protein pADP-1_p031 [Pseudomonas sp. ADP]
 gi|13937453|gb|AAK50264.1|U66917_31 hypothetical protein [Pseudomonas sp. ADP]
 gi|12644709|gb|AAK00500.1| cytosine deaminase-like protein [Acidovorax citrulli]
          Length = 158

 Score = 54.7 bits (130), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 33/103 (32%), Positives = 49/103 (47%), Gaps = 1/103 (0%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
            +  A+EEA+ + L   +P+G+V V   K++SR  N   +      HAE+ A+    R  
Sbjct: 10  MLQIAIEEAEASFLEGGLPIGSVLVHRGKLVSRGRNLRAQTGSTLHHAEMTALANAGR-Q 68

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109
             E   E  LY TL PC MC  A+ L  I ++  G    +  G
Sbjct: 69  PPEFYRETVLYTTLSPCPMCTGAMILYGIPKVVIGTPTVREWG 111


>gi|261188372|ref|XP_002620601.1| cytosine deaminase [Ajellomyces dermatitidis SLH14081]
 gi|239593201|gb|EEQ75782.1| cytosine deaminase [Ajellomyces dermatitidis SLH14081]
 gi|239609343|gb|EEQ86330.1| cytosine deaminase [Ajellomyces dermatitidis ER-3]
 gi|327354444|gb|EGE83301.1| cytosine deaminase [Ajellomyces dermatitidis ATCC 18188]
          Length = 143

 Score = 54.7 bits (130), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 40/143 (27%), Positives = 63/143 (44%), Gaps = 19/143 (13%)

Query: 11  ALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQE 69
           ALEEA+ +A    IP+GA  V  + KI+ R  N   +    T H EI A+    R+ +  
Sbjct: 11  ALEEAKKSAAVGGIPIGACLVARDGKILGRGHNMRVQKGSATLHGEIAALENSGRLPAST 70

Query: 70  ILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG----IENGTQFYTLATCHHS 125
            +    +Y T+ PC MC  A  L +++R+  G +    GG    I  G +   L      
Sbjct: 71  YVGAT-MYTTMSPCDMCTGACVLYKLKRVVVGENTTFMGGEQYLINRGVEVVVL------ 123

Query: 126 PEIYPGISEQRSRQIIQDFFKER 148
                    +   +++Q F +ER
Sbjct: 124 -------DNKECIEMVQKFIQER 139


>gi|83767797|dbj|BAE57936.1| unnamed protein product [Aspergillus oryzae]
          Length = 142

 Score = 54.3 bits (129), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 40/143 (27%), Positives = 62/143 (43%), Gaps = 19/143 (13%)

Query: 11  ALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQE 69
           ALEEA+       +P+GA  V  + KI+ R  N   +    T HAE+ A+    R L   
Sbjct: 10  ALEEAKQGYAEGGVPIGAALVSKDGKILGRGHNMRVQKGSATLHAEMSALENSGR-LPAS 68

Query: 70  ILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIE----NGTQFYTLATCHHS 125
                 +Y TL PC MC  A  L +++R+  G +    GG E     G +   L      
Sbjct: 69  AYEGATMYTTLSPCDMCTGACILYKVKRVVIGENKSFMGGEEYLKNRGKELVVL------ 122

Query: 126 PEIYPGISEQRSRQIIQDFFKER 148
                  + +  +Q+++ F KE+
Sbjct: 123 -------NNEECKQLMEKFMKEK 138


>gi|289640846|ref|ZP_06473017.1| CMP/dCMP deaminase zinc-binding [Frankia symbiont of Datisca
           glomerata]
 gi|289509422|gb|EFD30350.1| CMP/dCMP deaminase zinc-binding [Frankia symbiont of Datisca
           glomerata]
          Length = 157

 Score = 54.3 bits (129), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 45/135 (33%), Positives = 64/135 (47%), Gaps = 7/135 (5%)

Query: 1   MKKGNVFMSCALEEAQNAALRN----EIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAE 55
           M K   +M  ALE A+  AL +    + PVGAV    + + I+ A +  +   D TAHAE
Sbjct: 1   MAKYEPWMRRALEMAR--ALPDPGAGDPPVGAVIYGPDGREITAAHHDRQRTADPTAHAE 58

Query: 56  ILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
           I  +R   R L    L    L  TLEP  M A A+ LAR+ RL  G+ + + G + +   
Sbjct: 59  ITVLRRAGRALGTWKLDGCTLVTTLEPGVMAAGAVVLARMPRLVIGSWDERNGAVCSQWD 118

Query: 116 FYTLATCHHSPEIYP 130
                  +H  E+ P
Sbjct: 119 LVRDPRLNHFVEVIP 133


>gi|146338815|ref|YP_001203863.1| putative cytidine and deoxycytidylate deaminase zinc-binding
           protein [Bradyrhizobium sp. ORS278]
 gi|146191621|emb|CAL75626.1| putative cytidine and deoxycytidylate deaminase zinc-binding
           protein [Bradyrhizobium sp. ORS278]
          Length = 139

 Score = 54.3 bits (129), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 31/80 (38%), Positives = 42/80 (52%), Gaps = 1/80 (1%)

Query: 25  PVGAVAVLNN-KIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83
           P  A+ V  + +++  A N     +D TAHAE L     CR ++ +I     LY + EPC
Sbjct: 7   PFAAILVDGDGRVLIEAENGYMPDRDATAHAERLVATQACRSIAPDIRATATLYSSAEPC 66

Query: 84  TMCAAAISLARIRRLYYGAS 103
            MCA AI  A I R+ YG S
Sbjct: 67  AMCAGAIYWAGIGRVVYGLS 86


>gi|253989703|ref|YP_003041059.1| hypothetical protein PAU_02223 [Photorhabdus asymbiotica subsp.
           asymbiotica ATCC 43949]
 gi|253781153|emb|CAQ84315.1| conserved hypothetical protein [Photorhabdus asymbiotica]
          Length = 193

 Score = 54.3 bits (129), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 35/99 (35%), Positives = 53/99 (53%), Gaps = 7/99 (7%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           +M  A+EEA+ +A   + P GAV V   + +I+SR    N  +K+   H EI AI     
Sbjct: 48  YMREAIEEAKKSA---KYPFGAVIVNRSSGEILSRG--VNSWVKNPILHGEIQAINHYVT 102

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
           +   +    V LY T EPC+MC +A++   IR + +G S
Sbjct: 103 LYGNQGWNNVALYTTAEPCSMCMSALAWTGIREVIWGTS 141


>gi|238486578|ref|XP_002374527.1| cytosine deaminase, putative [Aspergillus flavus NRRL3357]
 gi|317144152|ref|XP_001819938.2| cytosine deaminase [Aspergillus oryzae RIB40]
 gi|220699406|gb|EED55745.1| cytosine deaminase, putative [Aspergillus flavus NRRL3357]
          Length = 148

 Score = 54.3 bits (129), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 40/143 (27%), Positives = 62/143 (43%), Gaps = 19/143 (13%)

Query: 11  ALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQE 69
           ALEEA+       +P+GA  V  + KI+ R  N   +    T HAE+ A+    R L   
Sbjct: 10  ALEEAKQGYAEGGVPIGAALVSKDGKILGRGHNMRVQKGSATLHAEMSALENSGR-LPAS 68

Query: 70  ILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIE----NGTQFYTLATCHHS 125
                 +Y TL PC MC  A  L +++R+  G +    GG E     G +   L      
Sbjct: 69  AYEGATMYTTLSPCDMCTGACILYKVKRVVIGENKSFMGGEEYLKNRGKELVVL------ 122

Query: 126 PEIYPGISEQRSRQIIQDFFKER 148
                  + +  +Q+++ F KE+
Sbjct: 123 -------NNEECKQLMEKFMKEK 138


>gi|300175372|emb|CBK20683.2| unnamed protein product [Blastocystis hominis]
          Length = 155

 Score = 54.3 bits (129), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 38/144 (26%), Positives = 69/144 (47%), Gaps = 12/144 (8%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAG-NRNRELKD------VTAHAEILAI 59
           M  A+E  + AAL   +PVG V +  N  I+   G NR     D      +   +E + +
Sbjct: 1   MRLAIELGRMAALNGNLPVGMVILDKNGNIMGECGDNRKNMFLDHCCFAGIRNQSERMNM 60

Query: 60  RMGCRILSQE---ILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116
           ++G +  S+E   +  + D+ +T EPC MC   +  +R+RR+ YG  + + G   +    
Sbjct: 61  QLGRKRASKEDPYLCTDYDIIITREPCIMCGMCLLHSRVRRVIYGCDD-RNGCFNSHIHL 119

Query: 117 YTLATCHHSPEIYPGISEQRSRQI 140
           +     +H   ++ G+ E + RQ+
Sbjct: 120 HYKEPLNHHFRVFRGVMEAQCRQL 143


>gi|189220330|ref|YP_001940970.1| Cytosine/adenosine deaminase [Methylacidiphilum infernorum V4]
 gi|189187188|gb|ACD84373.1| Cytosine/adenosine deaminase [Methylacidiphilum infernorum V4]
          Length = 159

 Score = 54.3 bits (129), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 32/80 (40%), Positives = 42/80 (52%)

Query: 25  PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84
           P G V VL ++I+ +  NR   L D TAHAEI A+R     L +  L    LY+ + P  
Sbjct: 28  PFGPVVVLEDQIVGQGANRVTVLCDPTAHAEIEAMRQAAIKLGRFDLRGCLLYMNINPYP 87

Query: 85  MCAAAISLARIRRLYYGASN 104
           MC  A   ARI+R+  G  N
Sbjct: 88  MCLTAAYWARIKRIVCGGPN 107


>gi|33595634|ref|NP_883277.1| hypothetical protein BPP0953 [Bordetella parapertussis 12822]
 gi|33600148|ref|NP_887708.1| hypothetical protein BB1162 [Bordetella bronchiseptica RB50]
 gi|33565712|emb|CAE40360.1| conserved hypothetical protein [Bordetella parapertussis]
 gi|33567746|emb|CAE31660.1| conserved hypothetical protein [Bordetella bronchiseptica RB50]
          Length = 169

 Score = 54.3 bits (129), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 43/80 (53%)

Query: 25  PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84
           P GA+   +  +++R  NR     D TAHAE+LA+R   R L    L    +Y + +PC 
Sbjct: 37  PFGALVAKDGVVLARGVNRMLADHDPTAHAELLALREAGRALRSARLDGCVVYASGQPCP 96

Query: 85  MCAAAISLARIRRLYYGASN 104
           MC AA+ ++ + R  Y  SN
Sbjct: 97  MCLAAMRMSGVARAVYAYSN 116


>gi|52841362|ref|YP_095161.1| cytidine/deoxycytidylate deaminase [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
 gi|54294070|ref|YP_126485.1| hypothetical protein lpl1134 [Legionella pneumophila str. Lens]
 gi|54297084|ref|YP_123453.1| hypothetical protein lpp1129 [Legionella pneumophila str. Paris]
 gi|52628473|gb|AAU27214.1| cytidine/deoxycytidylate deaminase [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
 gi|53750869|emb|CAH12280.1| hypothetical protein lpp1129 [Legionella pneumophila str. Paris]
 gi|53753902|emb|CAH15373.1| hypothetical protein lpl1134 [Legionella pneumophila str. Lens]
          Length = 154

 Score = 54.3 bits (129), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 28/76 (36%), Positives = 40/76 (52%)

Query: 25  PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84
           P   + V N KI++ A N   +  D TAHAE+ AIR+    L  E L + D Y+   PC 
Sbjct: 21  PFACLIVQNGKILAEATNTVAQTHDPTAHAEVNAIRIATAKLGCEHLYDCDFYILAHPCP 80

Query: 85  MCAAAISLARIRRLYY 100
           MC AA+     R++ +
Sbjct: 81  MCLAAMYYCSPRKVIF 96


>gi|332295153|ref|YP_004437076.1| CMP/dCMP deaminase zinc-binding protein [Thermodesulfobium
           narugense DSM 14796]
 gi|332178256|gb|AEE13945.1| CMP/dCMP deaminase zinc-binding protein [Thermodesulfobium
           narugense DSM 14796]
          Length = 154

 Score = 54.3 bits (129), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 37/127 (29%), Positives = 63/127 (49%), Gaps = 10/127 (7%)

Query: 23  EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEP 82
           E+P+GA+      I+S + N          HAEILAI+   +  ++  +    +Y +LEP
Sbjct: 21  ELPIGAIICKEGNILSMSQNFCERSNSPIEHAEILAIKKAIQRYNRWYIQGSTIYCSLEP 80

Query: 83  CTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQ 142
           C MCA AI   +I+ + +  S+      +N T+    +      E++    ++R R +I+
Sbjct: 81  CLMCAGAIIECKIKNVIFCVSS------KNSTRQILESNDIFCIEMF----DERFRNLIE 130

Query: 143 DFFKERR 149
            FFKE R
Sbjct: 131 RFFKEIR 137


>gi|307609878|emb|CBW99403.1| hypothetical protein LPW_11791 [Legionella pneumophila 130b]
          Length = 154

 Score = 53.9 bits (128), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 28/76 (36%), Positives = 40/76 (52%)

Query: 25  PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84
           P   + V N KI++ A N   +  D TAHAE+ AIR+    L  E L + D Y+   PC 
Sbjct: 21  PFACLIVQNGKILAEATNTVAQTHDPTAHAEVNAIRIATAKLGCEHLYDCDFYILAHPCP 80

Query: 85  MCAAAISLARIRRLYY 100
           MC AA+     R++ +
Sbjct: 81  MCLAAMYYCSPRKVIF 96


>gi|284167540|ref|YP_003405818.1| CMP/dCMP deaminase zinc-binding protein [Haloterrigena turkmenica
           DSM 5511]
 gi|284017195|gb|ADB63145.1| CMP/dCMP deaminase zinc-binding protein [Haloterrigena turkmenica
           DSM 5511]
          Length = 163

 Score = 53.9 bits (128), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 41/144 (28%), Positives = 59/144 (40%), Gaps = 13/144 (9%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  A E A+ A  R + P G V V ++ +I    NR     D+  H E+      CR L 
Sbjct: 24  MRRAFELAREAIDRGDRPFGTVLVRDDTVIMADSNRVVTEDDIRRHPELHLAYRACRELD 83

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
            +   E  +Y + EPC MCA  +  A   R+ Y        G +    F        S E
Sbjct: 84  PDERAETVMYTSTEPCPMCAGGMISAGFGRVVYSV------GSDELPAFTDSEPAVRSAE 137

Query: 128 IYPGISE-------QRSRQIIQDF 144
           I  G+S+       +  RQ+ +DF
Sbjct: 138 ILDGVSDVTGPVLNEEGRQLHRDF 161


>gi|254820531|ref|ZP_05225532.1| cytidine/deoxycytidylate deaminase [Mycobacterium intracellulare
          ATCC 13950]
          Length = 166

 Score = 53.9 bits (128), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 26/66 (39%), Positives = 36/66 (54%)

Query: 25 PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84
          P   V V   ++++ + NR  +  D TAHAEILAIR  C  L  E L +  +YV   PC 
Sbjct: 22 PFATVIVRGGEVLAESANRVAQTNDPTAHAEILAIREACVKLGTEHLVDTTIYVLAHPCP 81

Query: 85 MCAAAI 90
          MC  ++
Sbjct: 82 MCLGSL 87


>gi|58271532|ref|XP_572922.1| hypothetical protein [Cryptococcus neoformans var. neoformans
           JEC21]
 gi|134115302|ref|XP_773949.1| hypothetical protein CNBH4010 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|50256577|gb|EAL19302.1| hypothetical protein CNBH4010 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|57229181|gb|AAW45615.1| expressed protein [Cryptococcus neoformans var. neoformans JEC21]
          Length = 224

 Score = 53.9 bits (128), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 27/83 (32%), Positives = 42/83 (50%), Gaps = 9/83 (10%)

Query: 33  NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQ---------EILPEVDLYVTLEPC 83
           NN+++    N   E+ D T H E+ AIR   +  ++         EI P+  +Y T EPC
Sbjct: 65  NNELLCSGYNSQLEIGDPTEHGEVNAIRNCVKKYTELGWTPAQITEIWPQSWIYTTAEPC 124

Query: 84  TMCAAAISLARIRRLYYGASNPK 106
            MC + I  +  +R+ YG S+P 
Sbjct: 125 PMCGSTILQSGFKRVVYGTSSPD 147


>gi|332255864|ref|XP_003277047.1| PREDICTED: tRNA-specific adenosine deaminase-like protein 3
           [Nomascus leucogenys]
          Length = 367

 Score = 53.9 bits (128), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 28/71 (39%), Positives = 43/71 (60%), Gaps = 5/71 (7%)

Query: 75  DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF--YTLATCHHSPEIYPGI 132
           DLYVT EPC MCA  +  +RI R++YGAS+P G     GT+F  +     +H  +++ G+
Sbjct: 299 DLYVTREPCAMCAMGLVHSRILRVFYGASSPDGA---LGTRFRIHARPDLNHRFQVFRGV 355

Query: 133 SEQRSRQIIQD 143
            E++ R +  D
Sbjct: 356 LEEQCRWLDPD 366


>gi|321254949|ref|XP_003193256.1| hypothetical protein CGB_D0460W [Cryptococcus gattii WM276]
 gi|317459726|gb|ADV21469.1| Hypothetical Protein CGB_D0460W [Cryptococcus gattii WM276]
          Length = 224

 Score = 53.9 bits (128), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 42/82 (51%), Gaps = 9/82 (10%)

Query: 33  NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQ---------EILPEVDLYVTLEPC 83
           NN+++    N   E+ D T H EI AIR   +  ++         EI P+  +Y T EPC
Sbjct: 65  NNELLCSGYNSQLEIGDPTEHGEINAIRNCVKKYTELGWTPAQITEIWPQSWIYTTAEPC 124

Query: 84  TMCAAAISLARIRRLYYGASNP 105
            MC + I  +  +R+ YG S+P
Sbjct: 125 PMCGSTILQSGFKRVVYGTSSP 146


>gi|301098687|ref|XP_002898436.1| cytosine deaminase [Phytophthora infestans T30-4]
 gi|262105207|gb|EEY63259.1| cytosine deaminase [Phytophthora infestans T30-4]
          Length = 145

 Score = 53.9 bits (128), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 29/95 (30%), Positives = 49/95 (51%), Gaps = 1/95 (1%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           F+  A++EA+       IP+G+V  +++KI +R  NR  +      HAE+  +    R+ 
Sbjct: 4   FLQAAIDEAKLGLSEGGIPIGSVLEIDDKIAARGHNRRVQRGSAVLHAEMDCLENAGRLT 63

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
           + +      LY TL PC MC+ A+ L +I  +  G
Sbjct: 64  AAD-YARATLYSTLSPCDMCSGAVLLYKIPTIVVG 97


>gi|116694008|ref|YP_728219.1| putative cytosine/adenosine deaminase [Ralstonia eutropha H16]
 gi|113528507|emb|CAJ94854.1| Putative Cytosine/adenosine deaminase [Ralstonia eutropha H16]
          Length = 145

 Score = 53.9 bits (128), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 29/84 (34%), Positives = 44/84 (52%)

Query: 21  RNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80
           R   P GAV VL+ + ++   N      D T HAE+ A+R   R L +  L    +Y + 
Sbjct: 14  RGARPFGAVLVLDGEAVATGVNDIVHSHDPTTHAEMEAVRAAARKLGRPDLRGSVVYASG 73

Query: 81  EPCTMCAAAISLARIRRLYYGASN 104
            PC MC AA+++A ++ +YY   N
Sbjct: 74  HPCPMCLAAMTMAGVQAVYYAFDN 97


>gi|71026495|ref|XP_762917.1| cytidine deaminase [Theileria parva strain Muguga]
 gi|68349869|gb|EAN30634.1| cytidine deaminase, putative [Theileria parva]
          Length = 153

 Score = 53.9 bits (128), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 35/120 (29%), Positives = 54/120 (45%), Gaps = 20/120 (16%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           FM  ALEEA+ A  + E+ V  + V     ++++ + N      + T H E+ AI    +
Sbjct: 12  FMKLALEEAKKALDKEEVAVACIIVSKATREVVASSSNATNLTYNSTWHCELEAIN---K 68

Query: 65  ILS---------------QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109
           ++                +E      L+VT EPC MC  A+ L  +  +YYG  N K GG
Sbjct: 69  LIDMEPNGYKSQQDSGKLREFCSGFVLFVTCEPCIMCTTALQLIGLTEVYYGCKNEKFGG 128


>gi|220906017|ref|YP_002481328.1| CMP/dCMP deaminase [Cyanothece sp. PCC 7425]
 gi|219862628|gb|ACL42967.1| CMP/dCMP deaminase zinc-binding [Cyanothece sp. PCC 7425]
          Length = 161

 Score = 53.9 bits (128), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 34/98 (34%), Positives = 45/98 (45%), Gaps = 3/98 (3%)

Query: 25  PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84
           P G V   +  II+   NR     D T H E+ AIR   + L    L    LY + EPC 
Sbjct: 29  PFGCVIAKDGAIIAEGYNRVVAENDPTWHGEMAAIRQAAKQLQTFDLSGCVLYTSAEPCP 88

Query: 85  MCAAAISLARIRRLYYGA---SNPKGGGIENGTQFYTL 119
           MCAAA   AR+ R+ Y +      K GG ++   +  L
Sbjct: 89  MCAAACWWARLDRIVYASRVEDALKYGGFDDREIYLDL 126


>gi|328777317|ref|XP_003249314.1| PREDICTED: tRNA-specific adenosine deaminase-like protein 3-like
           [Apis mellifera]
          Length = 389

 Score = 53.9 bits (128), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 21/68 (30%), Positives = 41/68 (60%)

Query: 77  YVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQR 136
           ++ +EPC +CA A+  +RI R++YG SN   G +   T  + +   +H  +++ G+ EQ 
Sbjct: 316 FLLMEPCPLCAMALLHSRILRIFYGISNKTTGVLGTKTILHAVPGLNHRYQVWSGVLEQE 375

Query: 137 SRQIIQDF 144
            ++++QD 
Sbjct: 376 CQRVLQDI 383


>gi|300713101|ref|YP_003738913.1| Cytidine/deoxycytidylate deaminase, zinc-binding region (TBD)
           [Halalkalicoccus jeotgali B3]
 gi|299126785|gb|ADJ17122.1| Cytidine/deoxycytidylate deaminase, zinc-binding region (TBD)
           [Halalkalicoccus jeotgali B3]
          Length = 191

 Score = 53.9 bits (128), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 41/144 (28%), Positives = 59/144 (40%), Gaps = 13/144 (9%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M    E AQ A  R + P G+V V ++ II    NR     D+  H E+      CR   
Sbjct: 52  MRETFELAQEATARGDKPFGSVLVRDDTIIMSDSNREITEDDIRRHPELHLAYRACREYD 111

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
            +    + +Y +  PC MCA+ ++ A   R+ Y        G +    F  +     S E
Sbjct: 112 ADERAAMVMYTSTGPCPMCASGMATAGFGRVVYSV------GSDGIAVFTGIEPTVRSAE 165

Query: 128 IYPGISE-------QRSRQIIQDF 144
           I  GISE          R+I Q+F
Sbjct: 166 ILDGISEVVGPVLNDEGRRIHQEF 189


>gi|305664674|ref|YP_003860961.1| putative cytosine/adenosine deaminase [Maribacter sp. HTCC2170]
 gi|88707375|gb|EAQ99621.1| putative cytosine/adenosine deaminase [Maribacter sp. HTCC2170]
          Length = 154

 Score = 53.9 bits (128), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 37/121 (30%), Positives = 57/121 (47%), Gaps = 4/121 (3%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M   + +M+  ++ A+ A      PVGA+ V  ++I+       R  KD+T HAEI AI+
Sbjct: 10  MVNHDFYMAKCIQLAEEAKQNGNTPVGALIVSKDEILGIGRENTRSKKDITRHAEIEAIQ 69

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              + +    L    LY T EPC MC+  I    I  + +G  +   GG    ++F  L 
Sbjct: 70  NALKKVKS--LKGAILYTTHEPCVMCSYVIRHYEIGTVVFGLRSKYIGG--KSSEFNLLE 125

Query: 121 T 121
           T
Sbjct: 126 T 126


>gi|134115449|ref|XP_773438.1| hypothetical protein CNBI0520 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|50256064|gb|EAL18791.1| hypothetical protein CNBI0520 [Cryptococcus neoformans var.
           neoformans B-3501A]
          Length = 224

 Score = 53.5 bits (127), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 27/83 (32%), Positives = 42/83 (50%), Gaps = 9/83 (10%)

Query: 33  NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQ---------EILPEVDLYVTLEPC 83
           NN+++    N   E+ D T H E+ AIR   +  ++         EI P+  +Y T EPC
Sbjct: 65  NNELLCSGYNSQLEIGDPTEHGEVNAIRNCVKKYTELGWTPAQITEIWPQSWIYTTAEPC 124

Query: 84  TMCAAAISLARIRRLYYGASNPK 106
            MC + I  +  +R+ YG S+P 
Sbjct: 125 PMCGSTILQSGFKRVIYGTSSPD 147


>gi|325110159|ref|YP_004271227.1| CMP/dCMP deaminase zinc-binding protein [Planctomyces brasiliensis
           DSM 5305]
 gi|324970427|gb|ADY61205.1| CMP/dCMP deaminase zinc-binding protein [Planctomyces brasiliensis
           DSM 5305]
          Length = 154

 Score = 53.5 bits (127), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 33/86 (38%), Positives = 43/86 (50%), Gaps = 6/86 (6%)

Query: 23  EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVD---LYVT 79
           + P GAV   +      A   NR  ++ T H EI+AI       S+E  P+ +   LY T
Sbjct: 23  QFPFGAVITQSGSETILAEGWNRGSENPTWHGEIVAIN---DFFSREQQPDTESLTLYTT 79

Query: 80  LEPCTMCAAAISLARIRRLYYGASNP 105
            EPC MC +AI  A I R+ YG S P
Sbjct: 80  AEPCPMCQSAIHWAGIDRVVYGTSIP 105


>gi|271966223|ref|YP_003340419.1| cytidine/deoxycytidylate deaminase [Streptosporangium roseum DSM
          43021]
 gi|270509398|gb|ACZ87676.1| cytidine/deoxycytidylate deaminase [Streptosporangium roseum DSM
          43021]
          Length = 167

 Score = 53.5 bits (127), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 26/66 (39%), Positives = 36/66 (54%)

Query: 25 PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84
          P   V V + +I++ + N+  +  D TAHAEILAIR  C  L  E L    +YV   PC 
Sbjct: 21 PFATVIVKDGEILAESANKVAQTSDPTAHAEILAIREACMRLGTEHLTGTTIYVLAHPCP 80

Query: 85 MCAAAI 90
          MC  ++
Sbjct: 81 MCLGSL 86


>gi|113968486|ref|YP_732279.1| CMP/dCMP deaminase, zinc-binding [Shewanella sp. MR-4]
 gi|113883170|gb|ABI37222.1| CMP/dCMP deaminase, zinc-binding [Shewanella sp. MR-4]
          Length = 157

 Score = 53.5 bits (127), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 32/76 (42%), Positives = 43/76 (56%), Gaps = 1/76 (1%)

Query: 24  IPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEP 82
           +P  AV V  + +I++   NR + L D TAHAEI AIR    +L Q  L  + L  + EP
Sbjct: 25  LPFSAVIVDESGRIVAEGVNRVQALHDCTAHAEIQAIRKATLLLKQVSLEGMTLIASGEP 84

Query: 83  CTMCAAAISLARIRRL 98
           C  C  AI LA+I R+
Sbjct: 85  CGFCYMAIQLAKISRV 100


>gi|217979127|ref|YP_002363274.1| CMP/dCMP deaminase zinc-binding [Methylocella silvestris BL2]
 gi|217504503|gb|ACK51912.1| CMP/dCMP deaminase zinc-binding [Methylocella silvestris BL2]
          Length = 145

 Score = 53.5 bits (127), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 35/97 (36%), Positives = 46/97 (47%), Gaps = 4/97 (4%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  AL+EA       + P GA+   + + I+   N      D TAHAE++A+R      
Sbjct: 10  FMRAALKEAA----LGDFPFGALIAQDGETIATGRNLGETNDDPTAHAEMVALRGVIAAY 65

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
               L +  LY T EPC MC  AI    + RL Y AS
Sbjct: 66  GAARLRDSTLYATGEPCPMCMGAIIWCGVGRLVYAAS 102


>gi|239978013|ref|ZP_04700537.1| deaminase [Streptomyces albus J1074]
 gi|291449917|ref|ZP_06589307.1| deaminase [Streptomyces albus J1074]
 gi|291352866|gb|EFE79768.1| deaminase [Streptomyces albus J1074]
          Length = 168

 Score = 53.5 bits (127), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 31/97 (31%), Positives = 48/97 (49%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  A+  A ++A     P GA+   +  +++   N+     D +AHAE+ AIR  C+ L
Sbjct: 18  WMEQAISLATDSARSGGGPFGALIAKDGLVVATGHNQVTASLDPSAHAEVSAIRAACKEL 77

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
           +   L    L  + EPC MC +    AR+ RL Y A 
Sbjct: 78  NTFSLAGCVLITSCEPCPMCLSTALWARVDRLVYAAD 114


>gi|332705458|ref|ZP_08425536.1| cytosine/adenosine deaminase [Lyngbya majuscula 3L]
 gi|332355818|gb|EGJ35280.1| cytosine/adenosine deaminase [Lyngbya majuscula 3L]
          Length = 147

 Score = 53.5 bits (127), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 41/138 (29%), Positives = 60/138 (43%), Gaps = 12/138 (8%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR-MGCRIL 66
           M  A +EAQ       IP+G+V V   +I+ R  NR  +      H E+ A+  +G +  
Sbjct: 1   MLAAFKEAQMGFQEGGIPIGSVVVKGGEIVGRGHNRRVQKGSAILHGEMDALEDVGSQPA 60

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
           S     +V LY TL PC+MC  AI L +I  +  G         EN T            
Sbjct: 61  S--FYQDVVLYTTLSPCSMCTGAILLYKIPHVVIG---------ENKTFLGEEELLRSRG 109

Query: 127 EIYPGISEQRSRQIIQDF 144
            I   +++    Q++QDF
Sbjct: 110 VIVEVLNDDSCYQLMQDF 127


>gi|308497160|ref|XP_003110767.1| hypothetical protein CRE_04875 [Caenorhabditis remanei]
 gi|308242647|gb|EFO86599.1| hypothetical protein CRE_04875 [Caenorhabditis remanei]
          Length = 168

 Score = 53.5 bits (127), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 39/80 (48%), Gaps = 1/80 (1%)

Query: 25  PVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83
           P GAV V     ++++  N      D T HAE+ AIR  C+ L    L    LY +  PC
Sbjct: 36  PFGAVIVDKKGNVVAKGHNMVIVTNDPTMHAEMTAIRNACKALGTFDLSGHTLYTSCYPC 95

Query: 84  TMCAAAISLARIRRLYYGAS 103
            MC  A   AR   +YYGA+
Sbjct: 96  PMCMGASLWARFDAIYYGAT 115


>gi|149564876|ref|XP_001516821.1| PREDICTED: similar to hCG22695 [Ornithorhynchus anatinus]
          Length = 373

 Score = 53.5 bits (127), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 28/62 (45%), Positives = 41/62 (66%), Gaps = 5/62 (8%)

Query: 75  DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF--YTLATCHHSPEIYPGI 132
           DLYVT EPC MCA A+  +RI+R++YGAS+P G     GT++  ++    +H  E++ GI
Sbjct: 295 DLYVTSEPCVMCAMALLHSRIQRVFYGASSPDGA---LGTRYKIHSKEDLNHHFEVFRGI 351

Query: 133 SE 134
            E
Sbjct: 352 LE 353


>gi|183984819|ref|YP_001853110.1| deaminase [Mycobacterium marinum M]
 gi|183178145|gb|ACC43255.1| deaminase [Mycobacterium marinum M]
          Length = 166

 Score = 53.5 bits (127), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 25/66 (37%), Positives = 35/66 (53%)

Query: 25 PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84
          P   V V + ++++ + N+  +  D TAHAEILAIR  C  L  E L     YV   PC 
Sbjct: 22 PFATVIVKDGQVLAESANKVAQTNDPTAHAEILAIRAACTKLGTEQLFGTTFYVLAHPCP 81

Query: 85 MCAAAI 90
          MC  ++
Sbjct: 82 MCLGSL 87


>gi|149236051|ref|XP_001523903.1| cytosine deaminase [Lodderomyces elongisporus NRRL YB-4239]
 gi|146452279|gb|EDK46535.1| cytosine deaminase [Lodderomyces elongisporus NRRL YB-4239]
          Length = 160

 Score = 53.5 bits (127), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 41/152 (26%), Positives = 68/152 (44%), Gaps = 22/152 (14%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIR 60
           KKG   M+ ALE+AQ +     IP+G   +  + +++ R  N+  +      H E+  + 
Sbjct: 16  KKG---MAIALEQAQISYNEGGIPIGGCLIHKDGRVLGRGYNKRVQNGSPILHGEMSVLE 72

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIE----NGTQF 116
              R L   I  +  +Y TL PC MC  AI L  I+R+  G ++   GG E    NG + 
Sbjct: 73  NAGR-LPHSIYKDCTMYTTLSPCNMCTGAILLYGIKRVVMGENDTFVGGEELLKQNGVEL 131

Query: 117 YTLATCHHSPEIYPGISEQRSRQIIQDFFKER 148
             L              ++  ++I+  F +E+
Sbjct: 132 VNL-------------QDEGCKEILTKFIQEK 150


>gi|148253573|ref|YP_001238158.1| putative cytidine/deoxycytidylate deaminase family protein
           [Bradyrhizobium sp. BTAi1]
 gi|146405746|gb|ABQ34252.1| Putative Cytidine/deoxycytidylate deaminase family protein
           [Bradyrhizobium sp. BTAi1]
          Length = 240

 Score = 53.5 bits (127), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 31/80 (38%), Positives = 40/80 (50%), Gaps = 1/80 (1%)

Query: 25  PVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83
           P  AV V    +++  A N     +D TAHAE L     C  ++ +I     LY + EPC
Sbjct: 108 PFAAVLVDAGGRVLIEAENGYMPARDATAHAERLVATQACTSIAADIRATATLYSSAEPC 167

Query: 84  TMCAAAISLARIRRLYYGAS 103
            MCA AI  A I R+ YG S
Sbjct: 168 AMCAGAIYWAGIGRVVYGLS 187


>gi|320167576|gb|EFW44475.1| tRNA-specific adenosine deaminase-like protein 3 [Capsaspora
           owczarzaki ATCC 30864]
          Length = 418

 Score = 53.5 bits (127), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 39/150 (26%), Positives = 65/150 (43%), Gaps = 33/150 (22%)

Query: 25  PVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEV-------- 74
           P+GAV V    N I++  G+ +RE     AHA ++AI        QE L  +        
Sbjct: 266 PIGAVVVDPATNTILASVGDCSRE--HTLAHAAMVAIARVADAQRQEYLAALQQGENGAP 323

Query: 75  ---------------------DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENG 113
                                DLY+T EPC MC+ A+  +R+ R+++G  +P  GG+   
Sbjct: 324 ASAEAGNSRPVAELPYLCTSYDLYITREPCVMCSMALVHSRVGRVFFGTPHPDMGGLAGA 383

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQD 143
            + +     +H    + G++E+R   +  D
Sbjct: 384 RRIHAEPKLNHHFLAFRGVAERRCAALFCD 413


>gi|297275690|ref|XP_001096552.2| PREDICTED: tRNA-specific adenosine deaminase-like protein 3-like
           isoform 2 [Macaca mulatta]
          Length = 367

 Score = 53.5 bits (127), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 28/71 (39%), Positives = 42/71 (59%), Gaps = 5/71 (7%)

Query: 75  DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF--YTLATCHHSPEIYPGI 132
           DLYVT EPC MCA A+  +RI R++YGA +P G     GT+F  +     +H  +++ G+
Sbjct: 299 DLYVTREPCAMCAMALVHSRILRVFYGAPSPDGA---LGTRFRIHARPDLNHRFQVFRGV 355

Query: 133 SEQRSRQIIQD 143
            E+  R +  D
Sbjct: 356 LEEECRWLDPD 366


>gi|55379804|ref|YP_137654.1| cytosine deaminase [Haloarcula marismortui ATCC 43049]
 gi|55232529|gb|AAV47948.1| cytosine deaminase [Haloarcula marismortui ATCC 43049]
          Length = 154

 Score = 53.5 bits (127), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 35/124 (28%), Positives = 55/124 (44%), Gaps = 6/124 (4%)

Query: 11  ALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEI 70
           A E A+ A  R + P G+V V +N+++  A NR     DV  H E+       +    + 
Sbjct: 18  AFELARTAVDRGDRPFGSVLVRDNEVVMEASNRVLTESDVRRHPELQLAHRAMQEFDPDE 77

Query: 71  LPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYP 130
             E  +Y + EPC MCA  +  A + R+ Y   + + G      +F        S EI  
Sbjct: 78  RAETVMYTSTEPCPMCAGGLRYAGLGRVVYSVGSDEMG------EFSGHEESVRSGEILA 131

Query: 131 GISE 134
           GI++
Sbjct: 132 GITD 135


>gi|325662502|ref|ZP_08151105.1| hypothetical protein HMPREF0490_01845 [Lachnospiraceae bacterium
           4_1_37FAA]
 gi|325471198|gb|EGC74423.1| hypothetical protein HMPREF0490_01845 [Lachnospiraceae bacterium
           4_1_37FAA]
          Length = 159

 Score = 53.5 bits (127), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 35/98 (35%), Positives = 47/98 (47%), Gaps = 1/98 (1%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           ++  A+E ++ A      P GA+ V  + +II   GN     K  T HAE          
Sbjct: 8   YLRRAIEISKEARGAGNTPFGALLVNKDGEIIMEQGNIEITEKICTGHAEATLAARASHE 67

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
            S+E L +  LY T EPC MCA AI  A I R+ YG +
Sbjct: 68  YSKEYLWDCTLYTTAEPCAMCAGAIYWANIGRVVYGMT 105


>gi|156846411|ref|XP_001646093.1| hypothetical protein Kpol_543p65 [Vanderwaltozyma polyspora DSM
           70294]
 gi|156116765|gb|EDO18235.1| hypothetical protein Kpol_543p65 [Vanderwaltozyma polyspora DSM
           70294]
          Length = 268

 Score = 53.5 bits (127), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 39/115 (33%), Positives = 58/115 (50%), Gaps = 12/115 (10%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNK--IISRAGNRNRELKDVTAHAEILAIRMGCR 64
           +M  AL+ A++A    E PV  + V      I+S   N        T+HAE +AI    R
Sbjct: 11  YMEYALKLARHALDHGETPVACIFVDKKTGGIVSYGMNDTNNSLAGTSHAEFVAID---R 67

Query: 65  ILSQ-----EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           I +Q     +   ++ +YVT+EPC MCA+A+    I  + +G  N + GG  NGT
Sbjct: 68  IKNQFSSTFDKFEDIIVYVTVEPCIMCASALKQLGILNIVFGCGNERFGG--NGT 120


>gi|160897646|ref|YP_001563228.1| CMP/dCMP deaminase [Delftia acidovorans SPH-1]
 gi|160363230|gb|ABX34843.1| CMP/dCMP deaminase zinc-binding [Delftia acidovorans SPH-1]
          Length = 153

 Score = 53.1 bits (126), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 29/94 (30%), Positives = 48/94 (51%)

Query: 11  ALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEI 70
           A++ A +  LR   P GA+     +I+S   N   +  D +AHAE+ A+R G R  +   
Sbjct: 13  AVQLAHDNRLRGGRPFGALLAREGQILSTGVNEIVQSHDPSAHAEMQALRAGTRAQANPS 72

Query: 71  LPEVDLYVTLEPCTMCAAAISLARIRRLYYGASN 104
           L    +Y +  PC MC AA+ +A   ++++   N
Sbjct: 73  LAGCTIYASGHPCPMCLAALVMAGAEQVFFAFDN 106


>gi|240171878|ref|ZP_04750537.1| deaminase [Mycobacterium kansasii ATCC 12478]
          Length = 166

 Score = 53.1 bits (126), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 26/66 (39%), Positives = 36/66 (54%)

Query: 25 PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84
          P   V V + +I++ + N+  +  D TAHAEILAIR  C  L  E L    +YV   PC 
Sbjct: 22 PFATVIVKDGEILAESANKVAQTNDPTAHAEILAIREACTKLGTEHLVGTTIYVLAHPCP 81

Query: 85 MCAAAI 90
          MC  ++
Sbjct: 82 MCLGSL 87


>gi|257067316|ref|YP_003153571.1| cytosine/adenosine deaminase [Brachybacterium faecium DSM 4810]
 gi|256558134|gb|ACU83981.1| cytosine/adenosine deaminase [Brachybacterium faecium DSM 4810]
          Length = 175

 Score = 53.1 bits (126), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 35/96 (36%), Positives = 49/96 (51%), Gaps = 3/96 (3%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKD-VTAHAEILAIRMGCRI 65
           F+S A+E+A+ +     +P+GAV V + K+++ AG+  R  KD    H E   I    R 
Sbjct: 13  FLSLAIEQARKSWDEGGVPIGAVLVHDGKVLA-AGHNQRVQKDSAILHGETDTIEKAGR- 70

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
           L   +  E  LY TL PC MCA    L  I R+  G
Sbjct: 71  LRASVYRESVLYTTLSPCIMCAGTALLYEIPRIVIG 106


>gi|307105321|gb|EFN53571.1| hypothetical protein CHLNCDRAFT_13956 [Chlorella variabilis]
          Length = 131

 Score = 53.1 bits (126), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 29/79 (36%), Positives = 40/79 (50%), Gaps = 2/79 (2%)

Query: 27  GAVAVL--NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84
           GAV V     +++    N+     D T H E+ AIR  C       LP   LY + +PC 
Sbjct: 7   GAVIVDKETGEVVGEGYNKVILHNDPTWHGEMEAIRKACAKRGSPHLPGTVLYTSAQPCP 66

Query: 85  MCAAAISLARIRRLYYGAS 103
           MC+ AI  AR+  +YYGA+
Sbjct: 67  MCSTAIMWARVDHVYYGAT 85


>gi|22298002|ref|NP_681249.1| cytosine deaminase [Thermosynechococcus elongatus BP-1]
 gi|22294180|dbj|BAC08011.1| cytosine deaminase [Thermosynechococcus elongatus BP-1]
          Length = 193

 Score = 53.1 bits (126), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 41/141 (29%), Positives = 68/141 (48%), Gaps = 12/141 (8%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM+ A+ EA+       IP+G+V V + +II R  N+  +      HAEI  +    RI 
Sbjct: 48  FMAAAIAEAEQGLQEGGIPIGSVLVRHGQIIGRGHNQRVQRGSPILHAEIDCLANAGRIG 107

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
             +   +  LY TL PC +CA A+    I+++  G S    G  E     +  A   H  
Sbjct: 108 RYD---DTVLYSTLMPCYLCAGAVVQFGIKKVIAGESQTFAGARE-----FMEA---HGV 156

Query: 127 EIYPGISEQRSRQIIQDFFKE 147
           E+   ++ +R +Q+++DF  +
Sbjct: 157 EVID-LNLERCQQLMRDFIAQ 176


>gi|86749931|ref|YP_486427.1| twin-arginine translocation pathway signal [Rhodopseudomonas
           palustris HaA2]
 gi|86572959|gb|ABD07516.1| Twin-arginine translocation pathway signal [Rhodopseudomonas
           palustris HaA2]
          Length = 176

 Score = 53.1 bits (126), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 27/77 (35%), Positives = 42/77 (54%)

Query: 27  GAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMC 86
           GAV V + ++++  GN      D +AHAE+ AIR  C+ +    L    +Y + E C MC
Sbjct: 48  GAVIVRDGEVLAATGNSVLRDNDPSAHAEVNAIRAACKKVGAPNLRGATMYTSCECCPMC 107

Query: 87  AAAISLARIRRLYYGAS 103
            A    AR+ R+++ AS
Sbjct: 108 YATAYWARLDRIFFAAS 124


>gi|124486136|ref|YP_001030752.1| hypothetical protein Mlab_1318 [Methanocorpusculum labreanum Z]
 gi|124363677|gb|ABN07485.1| CMP/dCMP deaminase, zinc-binding protein [Methanocorpusculum
           labreanum Z]
          Length = 151

 Score = 53.1 bits (126), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 37/97 (38%), Positives = 49/97 (50%), Gaps = 5/97 (5%)

Query: 7   FMSCALEEAQNAALRNE--IPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           +M  A EEA   A RNE  IP+GAV V N +I+ R  N+  +  +   H E+ A+    R
Sbjct: 8   YMRAAYEEA--LAGRNEGGIPIGAVLVRNGEIVGRGHNQRVQKGNPILHGEMDALSNSGR 65

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
                   E  LY TL PC MC+ AI L +I  +  G
Sbjct: 66  -HPASFYKECTLYTTLAPCIMCSGAILLYKIPEVVVG 101


>gi|329890129|ref|ZP_08268472.1| guanine deaminase [Brevundimonas diminuta ATCC 11568]
 gi|328845430|gb|EGF94994.1| guanine deaminase [Brevundimonas diminuta ATCC 11568]
          Length = 150

 Score = 53.1 bits (126), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 34/97 (35%), Positives = 47/97 (48%), Gaps = 4/97 (4%)

Query: 12  LEEAQNAALRN----EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           L +A + AL N      P GAV V +  +I+   NR     D ++HAE+ A+R     L 
Sbjct: 10  LTQAVDLALENVRAGGRPFGAVLVKDGALIASGVNRMLATNDPSSHAEMEALRQAGPALG 69

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASN 104
              L    LY +  PC MC AA  + R+  +YY  SN
Sbjct: 70  GVDLSGAVLYASGHPCPMCLAAAVMTRVSAVYYAFSN 106


>gi|6322425|ref|NP_012499.1| Tad2p [Saccharomyces cerevisiae S288c]
 gi|1352970|sp|P47058|TAD2_YEAST RecName: Full=tRNA-specific adenosine deaminase subunit TAD2;
           AltName: Full=tRNA-specific adenosine-34 deaminase
           subunit TAD2
 gi|1008159|emb|CAA89326.1| unnamed protein product [Saccharomyces cerevisiae]
 gi|6434057|emb|CAB60629.1| tRNA-specific adenosine-34 deaminase subunit Tad2p/ADAT2
           [Saccharomyces cerevisiae]
 gi|51013795|gb|AAT93191.1| YJL035C [Saccharomyces cerevisiae]
 gi|151945050|gb|EDN63301.1| tRNA-specific adenosine deaminase subunit [Saccharomyces cerevisiae
           YJM789]
 gi|285812866|tpg|DAA08764.1| TPA: Tad2p [Saccharomyces cerevisiae S288c]
          Length = 250

 Score = 53.1 bits (126), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 37/129 (28%), Positives = 62/129 (48%), Gaps = 11/129 (8%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLN--NKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M  A+  A+ A   +E PV  + V     ++++   N   +     AHAE + I     +
Sbjct: 7   MRTAVRLARYALDHDETPVACIFVHTPTGQVMAYGMNDTNKSLTGVAHAEFMGIDQIKAM 66

Query: 66  LSQ----EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
           L      ++  ++ LYVT+EPC MCA+A+    I ++ +G  N + GG  NGT    L+ 
Sbjct: 67  LGSRGVVDVFKDITLYVTVEPCIMCASALKQLDIGKVVFGCGNERFGG--NGT---VLSV 121

Query: 122 CHHSPEIYP 130
            H +  + P
Sbjct: 122 NHDTCTLVP 130


>gi|307211478|gb|EFN87584.1| tRNA-specific adenosine deaminase-like protein 3 [Harpegnathos
           saltator]
          Length = 428

 Score = 53.1 bits (126), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 22/74 (29%), Positives = 45/74 (60%)

Query: 76  LYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQ 135
           +++  EPC +CA A+  +R+ R++YGA+NP+ G + +    +T+   +H   ++ GI E+
Sbjct: 353 VFLLTEPCPLCAMALLHSRVARVFYGAANPRVGVLGSRAILHTMPGLNHRYRVWSGILER 412

Query: 136 RSRQIIQDFFKERR 149
             R++ ++    RR
Sbjct: 413 ECRRVAEELDVRRR 426


>gi|256421680|ref|YP_003122333.1| CMP/dCMP deaminase zinc-binding [Chitinophaga pinensis DSM 2588]
 gi|256036588|gb|ACU60132.1| CMP/dCMP deaminase zinc-binding [Chitinophaga pinensis DSM 2588]
          Length = 131

 Score = 53.1 bits (126), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 32/104 (30%), Positives = 51/104 (49%), Gaps = 2/104 (1%)

Query: 15  AQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEV 74
           A  AA   E PVG+V V +  II     ++++ KD+T HAE++AI    R  + + L   
Sbjct: 8   ADIAAKEGESPVGSVIVKDGIIIGEGSEKSKQQKDITRHAEVVAILDALR--NTDSLAGS 65

Query: 75  DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
            LY  +EPC +C+  I   +I  + +   + + GG        T
Sbjct: 66  VLYTNVEPCLLCSYVIRHYKIAEVVFARHSGELGGTHQPFDLLT 109


>gi|325971024|ref|YP_004247215.1| CMP/dCMP deaminase zinc-binding protein [Spirochaeta sp. Buddy]
 gi|324026262|gb|ADY13021.1| CMP/dCMP deaminase zinc-binding protein [Spirochaeta sp. Buddy]
          Length = 156

 Score = 52.8 bits (125), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 34/94 (36%), Positives = 46/94 (48%), Gaps = 1/94 (1%)

Query: 11  ALEEAQNAALRN-EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQE 69
           A+E+A+   L+N   P GA+ V     +  A N      D TAHAE+  IR  C+     
Sbjct: 10  AVEKARETMLQNLGGPFGALLVDTQGQVFVASNTVLGSNDPTAHAEVNVIRQVCKQKGTH 69

Query: 70  ILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
            L    LY T  PC MC +A   A I+ +YYG +
Sbjct: 70  DLQGCILYTTCYPCPMCLSACIWANIKEVYYGCT 103


>gi|260771105|ref|ZP_05880032.1| cytosine deaminase [Vibrio furnissii CIP 102972]
 gi|260613702|gb|EEX38894.1| cytosine deaminase [Vibrio furnissii CIP 102972]
          Length = 158

 Score = 52.8 bits (125), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 33/93 (35%), Positives = 47/93 (50%), Gaps = 1/93 (1%)

Query: 15  AQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPE 73
           A++A  R   P  AV V  N +I+    N      D+T HAE L +    ++   + L +
Sbjct: 18  AEDAKSRGIHPFAAVLVDANGEILLEQINGYLPDLDMTGHAERLIMTQASKLYRPDFLNQ 77

Query: 74  VDLYVTLEPCTMCAAAISLARIRRLYYGASNPK 106
             LYV+ EPC MCA AI  A + R+ YG S  +
Sbjct: 78  CTLYVSAEPCAMCAGAIYWAGVGRVVYGLSETR 110


>gi|316971942|gb|EFV55655.1| guanine deaminase [Trichinella spiralis]
          Length = 161

 Score = 52.8 bits (125), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 27/79 (34%), Positives = 39/79 (49%)

Query: 25  PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84
           P GA+ V N ++++   N      D TAHAE+  IR     L    L   +LY + +PC 
Sbjct: 31  PFGALVVKNGRVLAIGHNEVLLTNDPTAHAEVTVIRRAAAALGHWNLAGCELYTSCKPCP 90

Query: 85  MCAAAISLARIRRLYYGAS 103
           MC  A   + I ++YY  S
Sbjct: 91  MCLGAALWSGIEKIYYSLS 109


>gi|297191556|ref|ZP_06908954.1| deaminase [Streptomyces pristinaespiralis ATCC 25486]
 gi|197719293|gb|EDY63201.1| deaminase [Streptomyces pristinaespiralis ATCC 25486]
          Length = 167

 Score = 52.8 bits (125), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 27/76 (35%), Positives = 41/76 (53%)

Query: 25  PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84
           P GA+ V + +I++   N+     D TAH E+ AIR GC+ L    L    L  + EPC 
Sbjct: 35  PFGALIVKDGEIVAIGNNKVTSNLDPTAHGEVSAIRAGCQKLGTFSLEGCVLVTSCEPCP 94

Query: 85  MCAAAISLARIRRLYY 100
           MC ++   AR+ R+ +
Sbjct: 95  MCLSSALWARVDRIIF 110


>gi|73539205|ref|YP_299572.1| cytidine/deoxycytidylate deaminase, zinc-binding region [Ralstonia
           eutropha JMP134]
 gi|72122542|gb|AAZ64728.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [Ralstonia
           eutropha JMP134]
          Length = 152

 Score = 52.8 bits (125), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 48/98 (48%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
            M  A+E A     R   P GAV  ++ + ++   N      D T HAE+ A+R   R L
Sbjct: 7   LMREAVELAVTNLRRGGRPFGAVLAIDGEAVATGVNDIVHSHDPTTHAEMEAVRAAARKL 66

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASN 104
            +  L    +Y +  PC MC AA+++A ++ +YY   N
Sbjct: 67  GRPDLSGSVVYASGHPCPMCLAAMTMAGVQAVYYAFDN 104


>gi|312141603|ref|YP_004008939.1| cmp/dcmp deaminase [Rhodococcus equi 103S]
 gi|311890942|emb|CBH50261.1| CMP/dCMP deaminase [Rhodococcus equi 103S]
          Length = 156

 Score = 52.8 bits (125), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 26/66 (39%), Positives = 36/66 (54%)

Query: 25 PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84
          P  AV V + ++++ + NR  +  D TAHAEILAI   C  L  E L    +YV   PC 
Sbjct: 21 PFAAVIVKDGEVLAESPNRVAQTGDPTAHAEILAISQACTELGTEHLTGTTIYVLAHPCP 80

Query: 85 MCAAAI 90
          MC  ++
Sbjct: 81 MCLGSL 86


>gi|119486672|ref|XP_001262322.1| hypothetical protein NFIA_028560 [Neosartorya fischeri NRRL 181]
 gi|119410479|gb|EAW20425.1| hypothetical protein NFIA_028560 [Neosartorya fischeri NRRL 181]
          Length = 106

 Score = 52.8 bits (125), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 24/78 (30%), Positives = 45/78 (57%)

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
           + +L   DLYVT+EPC MCA+A+   +IR +Y+G +N + GG  +    ++  T      
Sbjct: 7   KSLLRSTDLYVTVEPCVMCASALRQYQIRAVYFGCANDRFGGTGSILSLHSDFTIDPPYP 66

Query: 128 IYPGISEQRSRQIIQDFF 145
           +Y G+  + +  +++ F+
Sbjct: 67  VYGGLFRKEAIMLLRRFY 84


>gi|118616295|ref|YP_904627.1| hypothetical protein MUL_0449 [Mycobacterium ulcerans Agy99]
 gi|118568405|gb|ABL03156.1| conserved hypothetical protein [Mycobacterium ulcerans Agy99]
          Length = 102

 Score = 52.8 bits (125), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 25/62 (40%), Positives = 33/62 (53%)

Query: 25 PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84
          P   V V + ++++ + N+  +  D TAHAEILAIR  C  L  E L     YV   PC 
Sbjct: 22 PFATVIVKDGQVLAESANKVAQTNDPTAHAEILAIRAACTKLGTEQLFGTTFYVLAHPCP 81

Query: 85 MC 86
          MC
Sbjct: 82 MC 83


>gi|134094405|ref|YP_001099480.1| putative guanine deaminase [Herminiimonas arsenicoxydans]
 gi|133738308|emb|CAL61353.1| Guanine deaminase (Guanase) (Guanine aminase) (Guanine
           aminohydrolase) (GAH) (GDEase) [Herminiimonas
           arsenicoxydans]
          Length = 153

 Score = 52.8 bits (125), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 32/94 (34%), Positives = 47/94 (50%)

Query: 11  ALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEI 70
           A++ AQ    R   P GAV  ++N++I+   N      D T HAE+ AIR   + L +  
Sbjct: 12  AVQLAQENRERGGRPFGAVLAIDNEVIAVGVNNIVHSHDPTTHAEMEAIRSASQRLGRPN 71

Query: 71  LPEVDLYVTLEPCTMCAAAISLARIRRLYYGASN 104
           L    +Y +  PC MC AA+ L  +  +YY   N
Sbjct: 72  LKGSVIYASGHPCPMCLAAMVLTGVDAVYYAFDN 105


>gi|315179290|gb|ADT86204.1| zinc-binding domain protein [Vibrio furnissii NCTC 11218]
          Length = 158

 Score = 52.8 bits (125), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 33/93 (35%), Positives = 47/93 (50%), Gaps = 1/93 (1%)

Query: 15  AQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPE 73
           A++A  R   P  AV V  N +I+    N      D+T HAE L +    ++   + L +
Sbjct: 18  AEDAKSRGIHPFAAVLVDANGEILLEQINGYLPDLDMTGHAERLIMTQASKLYRPDFLNQ 77

Query: 74  VDLYVTLEPCTMCAAAISLARIRRLYYGASNPK 106
             LYV+ EPC MCA AI  A + R+ YG S  +
Sbjct: 78  CTLYVSAEPCAMCAGAIYWAGVGRVVYGLSETR 110


>gi|242011321|ref|XP_002426401.1| cytidine and deoxycytidylate deaminase zinc-binding region,
           putative [Pediculus humanus corporis]
 gi|212510500|gb|EEB13663.1| cytidine and deoxycytidylate deaminase zinc-binding region,
           putative [Pediculus humanus corporis]
          Length = 359

 Score = 52.8 bits (125), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 19/55 (34%), Positives = 34/55 (61%)

Query: 75  DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIY 129
           DLYV  EPC MCA ++  +RI+R+++   NP+ G + +    +T+   +H  E++
Sbjct: 298 DLYVAKEPCVMCAMSLVHSRIKRVFFHVRNPERGALASACHVHTIKDLNHHYEVF 352


>gi|115388491|ref|XP_001211751.1| cytosine deaminase [Aspergillus terreus NIH2624]
 gi|114195835|gb|EAU37535.1| cytosine deaminase [Aspergillus terreus NIH2624]
          Length = 148

 Score = 52.8 bits (125), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 60/143 (41%), Gaps = 19/143 (13%)

Query: 11  ALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQE 69
           A+EEA+  A    +P+GA  V  + KI+ R  N   +    T HAE+ A+    R L   
Sbjct: 10  AVEEAKKGAAEGGVPIGAALVSKDGKILGRGHNMRVQKGSATLHAEMAALENSGR-LPAS 68

Query: 70  ILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIE----NGTQFYTLATCHHS 125
                 +Y TL PC MC  A  L +I R+  G +    GG E     G +   L      
Sbjct: 69  AYAGATMYTTLSPCDMCTGACILYKINRVVIGENQNFLGGEELLLNKGKEVVVL------ 122

Query: 126 PEIYPGISEQRSRQIIQDFFKER 148
                       +Q+++ F KE+
Sbjct: 123 -------DHAECKQLMETFIKEK 138


>gi|162147221|ref|YP_001601682.1| cytidine deaminase [Gluconacetobacter diazotrophicus PAl 5]
 gi|209544272|ref|YP_002276501.1| CMP/dCMP deaminase [Gluconacetobacter diazotrophicus PAl 5]
 gi|161785798|emb|CAP55369.1| putative cytidine deaminase [Gluconacetobacter diazotrophicus PAl
           5]
 gi|209531949|gb|ACI51886.1| CMP/dCMP deaminase zinc-binding [Gluconacetobacter diazotrophicus
           PAl 5]
          Length = 168

 Score = 52.8 bits (125), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 28/76 (36%), Positives = 41/76 (53%), Gaps = 1/76 (1%)

Query: 29  VAVLNNKIISRAGNRNRELK-DVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCA 87
           VA    +++S A N +   + D T HAE+ A+    RIL  + + +  LY + EPC MCA
Sbjct: 35  VADAQGRVVSTAINNSMPPEGDPTQHAELRAVAGAARILPPDAMADCTLYTSAEPCCMCA 94

Query: 88  AAISLARIRRLYYGAS 103
            A+    IRR+ Y  S
Sbjct: 95  GAVYWTNIRRVVYALS 110


>gi|190409464|gb|EDV12729.1| tRNA-specific adenosine deaminase 2 [Saccharomyces cerevisiae
           RM11-1a]
          Length = 250

 Score = 52.8 bits (125), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 42/153 (27%), Positives = 70/153 (45%), Gaps = 17/153 (11%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLN--NKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M  A+  A+ A   +E PV  + V     ++++   N   +     AHAE + I     +
Sbjct: 7   MRTAVRLARYALDHDETPVACIFVHTPTGQVMAYGMNDTNKSLTGVAHAEFMGIDQIKAM 66

Query: 66  LSQ----EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF-YTLA 120
           L      ++  ++ LYVT+EPC MCA+A+    I ++ +G  N + GG  NGT       
Sbjct: 67  LGSRGVVDVFKDITLYVTVEPCIMCASALKQLGIGKVVFGCGNERFGG--NGTVLSVNHD 124

Query: 121 TCHHSP--------EIYPGISEQRSRQIIQDFF 145
           TC   P        E  PGI  + +  +++ F+
Sbjct: 125 TCTLVPKNNSAAGYESIPGILRKEAIMLLRYFY 157


>gi|323333035|gb|EGA74437.1| Tad2p [Saccharomyces cerevisiae AWRI796]
          Length = 244

 Score = 52.4 bits (124), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 42/153 (27%), Positives = 70/153 (45%), Gaps = 17/153 (11%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLN--NKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M  A+  A+ A   +E PV  + V     ++++   N   +     AHAE + I     +
Sbjct: 1   MRTAVRLARYALDHDETPVACIFVHTPTGQVMAYGMNDTNKSLTGVAHAEFMGIDQIKAM 60

Query: 66  LSQ----EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF-YTLA 120
           L      ++  ++ LYVT+EPC MCA+A+    I ++ +G  N + GG  NGT       
Sbjct: 61  LGSRGVVDVFKDITLYVTVEPCIMCASALKQLGIGKVVFGCGNERFGG--NGTVLSVNHD 118

Query: 121 TCHHSP--------EIYPGISEQRSRQIIQDFF 145
           TC   P        E  PGI  + +  +++ F+
Sbjct: 119 TCTLVPKNNSAAGYESIPGILRKEAIMLLRYFY 151


>gi|255935941|ref|XP_002558997.1| Pc13g05630 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211583617|emb|CAP91632.1| Pc13g05630 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 165

 Score = 52.4 bits (124), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 34/97 (35%), Positives = 46/97 (47%), Gaps = 16/97 (16%)

Query: 3  KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRA---GNRNRELKDVTAHAEILAI 59
          K   FM  AL   + A    E PVG V V N++I+       NR+  +K + +H      
Sbjct: 12 KHGYFMKQALLMGEKAIQSGETPVGCVLVHNDQIVGYGMNDTNRSMNVKMLQSHP----- 66

Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIR 96
                  +  L   DLYVT+EPC MCA+A+   RIR
Sbjct: 67 --------RSALQSTDLYVTVEPCVMCASALKQYRIR 95


>gi|325964826|ref|YP_004242732.1| cytosine/adenosine deaminase [Arthrobacter phenanthrenivorans
           Sphe3]
 gi|323470913|gb|ADX74598.1| cytosine/adenosine deaminase [Arthrobacter phenanthrenivorans
           Sphe3]
          Length = 164

 Score = 52.4 bits (124), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 33/102 (32%), Positives = 46/102 (45%), Gaps = 3/102 (2%)

Query: 10  CALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQE 69
            A + AQ +A    IP+GA       +I+   N   +  D  AH E+ A+R   R   Q+
Sbjct: 23  AAYQAAQKSAGEGGIPIGAALARGGVVIAAGHNERVQKGDPIAHGEMSALRAAGR---QK 79

Query: 70  ILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIE 111
              +  LY TL PC MC   I   +I R+  G +   GG  E
Sbjct: 80  SYRDTTLYTTLAPCAMCTGTIIQFKIPRVVVGEARTFGGEFE 121


>gi|207343953|gb|EDZ71253.1| YJL035Cp-like protein [Saccharomyces cerevisiae AWRI1631]
          Length = 250

 Score = 52.4 bits (124), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 37/129 (28%), Positives = 62/129 (48%), Gaps = 11/129 (8%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLN--NKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M  A+  A+ A   +E PV  + V     ++++   N   +     AHAE + I     +
Sbjct: 7   MRTAVRLARYALDHDETPVACIFVHTPTGQVMAYGMNDTNKSLTGVAHAEFMGIDQIKAM 66

Query: 66  LSQ----EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
           L      ++  ++ LYVT+EPC MCA+A+    I ++ +G  N + GG  NGT    L+ 
Sbjct: 67  LGSRGVVDVFKDITLYVTVEPCIMCASALKQLGIGKVVFGCGNERFGG--NGT---VLSV 121

Query: 122 CHHSPEIYP 130
            H +  + P
Sbjct: 122 NHDTCTLVP 130


>gi|183222799|ref|YP_001840795.1| putative cytidine/adenosine deaminase [Leptospira biflexa serovar
           Patoc strain 'Patoc 1 (Paris)']
 gi|189912831|ref|YP_001964386.1| cytosine/adenosine deaminase [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Ames)']
 gi|167777507|gb|ABZ95808.1| Cytosine/adenosine deaminase [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Ames)']
 gi|167781221|gb|ABZ99519.1| Putative cytidine/adenosine deaminase [Leptospira biflexa serovar
           Patoc strain 'Patoc 1 (Paris)']
          Length = 146

 Score = 52.4 bits (124), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 38/130 (29%), Positives = 60/130 (46%), Gaps = 3/130 (2%)

Query: 21  RNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVT 79
           +NEIP    +   +  ++S + N   +  + T H+EILAI      +    L E  L   
Sbjct: 19  KNEIPSYSEIITKDGNLVSSSFNSVEQTLNPTKHSEILAIEKALSHVDGRYLSEHILITA 78

Query: 80  LEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139
           LEPC +CA A+   ++  + Y      G GI + T   ++   +H P+    I E R + 
Sbjct: 79  LEPCILCAGAVVRVKLPEVVYFLPAKPGEGISSYTT-ESIYLLNHFPKC-TLIPESRIKF 136

Query: 140 IIQDFFKERR 149
               FFKE+R
Sbjct: 137 EFLSFFKEKR 146


>gi|118591858|ref|ZP_01549253.1| putative deaminase [Stappia aggregata IAM 12614]
 gi|118435501|gb|EAV42147.1| putative deaminase [Stappia aggregata IAM 12614]
          Length = 155

 Score = 52.4 bits (124), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 32/81 (39%), Positives = 40/81 (49%), Gaps = 1/81 (1%)

Query: 24  IPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEP 82
           IP  A  V  N +I+ R  NR RE  D TAHAE+ AIR  CR      L    L  + EP
Sbjct: 17  IPFTAFVVDRNGEILGRGVNRVREYHDPTAHAEVEAIRDACRTHGTVHLHGATLLASGEP 76

Query: 83  CTMCAAAISLARIRRLYYGAS 103
           C MC  +   A + R+ + A 
Sbjct: 77  CAMCYMSALDAGVSRILFAAD 97


>gi|154505762|ref|ZP_02042500.1| hypothetical protein RUMGNA_03302 [Ruminococcus gnavus ATCC 29149]
 gi|153793780|gb|EDN76200.1| hypothetical protein RUMGNA_03302 [Ruminococcus gnavus ATCC 29149]
          Length = 159

 Score = 52.4 bits (124), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 35/98 (35%), Positives = 46/98 (46%), Gaps = 1/98 (1%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           ++  A+E ++ A      P GA+ V    +II   GN     K  T HAE          
Sbjct: 8   YLRRAIEISKEAREAGNTPFGALLVNKEGEIIMEQGNIEITEKICTGHAEATLAARASHE 67

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
            S+E L +  LY T EPC MCA AI  A I R+ YG +
Sbjct: 68  YSREFLWDCTLYTTAEPCAMCAGAIYWANIGRVVYGMT 105


>gi|323306816|gb|EGA60101.1| Fcy1p [Saccharomyces cerevisiae FostersO]
          Length = 158

 Score = 52.4 bits (124), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 42/145 (28%), Positives = 65/145 (44%), Gaps = 15/145 (10%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNK---IISRAGNRNRELKDVTAHAEILAIRMGCR 64
           M  A EEA        +P+G   ++NNK   ++ R  N   +    T H EI  +   C 
Sbjct: 15  MDIAYEEAALGYKEGGVPIGG-CLINNKDGSVLGRGHNMRFQKGSATLHGEISTLE-NCG 72

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS-NPKGGGIENGTQFYTLATCH 123
            L  ++  +  LY TL PC MC  AI +  I R   G + N K      G ++  L T  
Sbjct: 73  RLEGKVYKDTTLYTTLSPCDMCTGAIIMYGIPRCVVGENXNFK----SKGEKY--LQTRG 126

Query: 124 HSPEIYPGISEQRSRQIIQDFFKER 148
           H   +   + ++R ++I++ F  ER
Sbjct: 127 HEVVV---VDDERCKKIMKQFIDER 148


>gi|34810531|pdb|1P6O|A Chain A, The Crystal Structure Of Yeast Cytosine Deaminase Bound To
           4(R)-Hydroxyl-3,4-Dihydropyrimidine At 1.14 Angstroms.
 gi|34810532|pdb|1P6O|B Chain B, The Crystal Structure Of Yeast Cytosine Deaminase Bound To
           4(R)-Hydroxyl-3,4-Dihydropyrimidine At 1.14 Angstroms.
 gi|46015452|pdb|1RB7|A Chain A, Yeast Cytosine Deaminase Crystal Form P212121 With Sodium
           Acetate.
 gi|46015453|pdb|1RB7|B Chain B, Yeast Cytosine Deaminase Crystal Form P212121 With Sodium
           Acetate
          Length = 161

 Score = 52.4 bits (124), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 42/145 (28%), Positives = 65/145 (44%), Gaps = 15/145 (10%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNK---IISRAGNRNRELKDVTAHAEILAIRMGCR 64
           M  A EEA        +P+G   ++NNK   ++ R  N   +    T H EI  +   C 
Sbjct: 18  MDIAYEEAALGYKEGGVPIGG-CLINNKDGSVLGRGHNMRFQKGSATLHGEISTLE-NCG 75

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS-NPKGGGIENGTQFYTLATCH 123
            L  ++  +  LY TL PC MC  AI +  I R   G + N K      G ++  L T  
Sbjct: 76  RLEGKVYKDTTLYTTLSPCDMCTGAIIMYGIPRCVVGENVNFK----SKGEKY--LQTRG 129

Query: 124 HSPEIYPGISEQRSRQIIQDFFKER 148
           H   +   + ++R ++I++ F  ER
Sbjct: 130 HEVVV---VDDERCKKIMKQFIDER 151


>gi|323304324|gb|EGA58097.1| Tad2p [Saccharomyces cerevisiae FostersB]
          Length = 242

 Score = 52.4 bits (124), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 42/153 (27%), Positives = 70/153 (45%), Gaps = 17/153 (11%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLN--NKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M  A+  A+ A   +E PV  + V     ++++   N   +     AHAE + I     +
Sbjct: 7   MRTAVRLARYALDHDETPVACIFVHTPTGQVMAYGMNDTNKSLTGVAHAEFMGIDQIKAM 66

Query: 66  LSQ----EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF-YTLA 120
           L      ++  ++ LYVT+EPC MCA+A+    I ++ +G  N + GG  NGT       
Sbjct: 67  LGSRGVVDVFKDITLYVTVEPCIMCASALKQLGIGKVVFGCGNERFGG--NGTVLSVNHD 124

Query: 121 TCHHSP--------EIYPGISEQRSRQIIQDFF 145
           TC   P        E  PGI  + +  +++ F+
Sbjct: 125 TCTLVPKNNSAAGYESIPGILRKEAIMLLRYFY 157


>gi|71415321|ref|XP_809731.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
 gi|70874158|gb|EAN87880.1| hypothetical protein, conserved [Trypanosoma cruzi]
          Length = 384

 Score = 52.4 bits (124), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 20/57 (35%), Positives = 37/57 (64%)

Query: 73  EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIY 129
           E+DL+V+ EPC MC+ A+  +R+RR++Y  +NP  GG+ +    +T+   +H   ++
Sbjct: 296 EIDLFVSHEPCVMCSMALVHSRVRRVFYCFANPTHGGLGSVFSIHTIPLLNHHFRVF 352


>gi|6325319|ref|NP_015387.1| Fcy1p [Saccharomyces cerevisiae S288c]
 gi|2493561|sp|Q12178|FCY1_YEAST RecName: Full=Cytosine deaminase; AltName: Full=Cytosine
           aminohydrolase
 gi|30750134|pdb|1UAQ|A Chain A, The Crystal Structure Of Yeast Cytosine Deaminase
 gi|30750135|pdb|1UAQ|B Chain B, The Crystal Structure Of Yeast Cytosine Deaminase
 gi|805042|emb|CAA89179.1| unknown [Saccharomyces cerevisiae]
 gi|1314130|emb|CAA95006.1| unknown [Saccharomyces cerevisiae]
 gi|1762322|gb|AAC13409.1| cytosine deaminase [Saccharomyces cerevisiae]
 gi|2343114|gb|AAB67713.1| cytosine deaminase [Saccharomyces cerevisiae]
 gi|151942846|gb|EDN61192.1| cytosine deaminase [Saccharomyces cerevisiae YJM789]
 gi|190407999|gb|EDV11264.1| cytosine deaminase [Saccharomyces cerevisiae RM11-1a]
 gi|256268919|gb|EEU04266.1| Fcy1p [Saccharomyces cerevisiae JAY291]
 gi|259150215|emb|CAY87018.1| Fcy1p [Saccharomyces cerevisiae EC1118]
 gi|285815591|tpg|DAA11483.1| TPA: Fcy1p [Saccharomyces cerevisiae S288c]
 gi|323302562|gb|EGA56369.1| Fcy1p [Saccharomyces cerevisiae FostersB]
 gi|323335147|gb|EGA76437.1| Fcy1p [Saccharomyces cerevisiae Vin13]
 gi|323346295|gb|EGA80585.1| Fcy1p [Saccharomyces cerevisiae Lalvin QA23]
 gi|323350206|gb|EGA84353.1| Fcy1p [Saccharomyces cerevisiae VL3]
          Length = 158

 Score = 52.4 bits (124), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 42/145 (28%), Positives = 65/145 (44%), Gaps = 15/145 (10%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNK---IISRAGNRNRELKDVTAHAEILAIRMGCR 64
           M  A EEA        +P+G   ++NNK   ++ R  N   +    T H EI  +   C 
Sbjct: 15  MDIAYEEAALGYKEGGVPIGG-CLINNKDGSVLGRGHNMRFQKGSATLHGEISTLE-NCG 72

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS-NPKGGGIENGTQFYTLATCH 123
            L  ++  +  LY TL PC MC  AI +  I R   G + N K      G ++  L T  
Sbjct: 73  RLEGKVYKDTTLYTTLSPCDMCTGAIIMYGIPRCVVGENVNFK----SKGEKY--LQTRG 126

Query: 124 HSPEIYPGISEQRSRQIIQDFFKER 148
           H   +   + ++R ++I++ F  ER
Sbjct: 127 HEVVV---VDDERCKKIMKQFIDER 148


>gi|323308420|gb|EGA61665.1| Tad2p [Saccharomyces cerevisiae FostersO]
 gi|323354467|gb|EGA86306.1| Tad2p [Saccharomyces cerevisiae VL3]
          Length = 244

 Score = 52.4 bits (124), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 37/129 (28%), Positives = 62/129 (48%), Gaps = 11/129 (8%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLN--NKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M  A+  A+ A   +E PV  + V     ++++   N   +     AHAE + I     +
Sbjct: 1   MRTAVRLARYALDHDETPVACIFVHTPTGQVMAYGMNDTNKSLTGVAHAEFMGIDQIKAM 60

Query: 66  LSQ----EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
           L      ++  ++ LYVT+EPC MCA+A+    I ++ +G  N + GG  NGT    L+ 
Sbjct: 61  LGSRGVVDVFKDITLYVTVEPCIMCASALKQLGIGKVVFGCGNERFGG--NGT---VLSV 115

Query: 122 CHHSPEIYP 130
            H +  + P
Sbjct: 116 NHDTCTLVP 124


>gi|317509467|ref|ZP_07967084.1| cytidine and deoxycytidylate deaminase zinc-binding protein
          [Segniliparus rugosus ATCC BAA-974]
 gi|316252241|gb|EFV11694.1| cytidine and deoxycytidylate deaminase zinc-binding protein
          [Segniliparus rugosus ATCC BAA-974]
          Length = 167

 Score = 52.4 bits (124), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 26/66 (39%), Positives = 36/66 (54%)

Query: 25 PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84
          P   V V + +I++ + N+  +  D TAHAEILAIR  C  L  E L    +YV   PC 
Sbjct: 21 PFATVIVRDGEILAESANKVAQTGDPTAHAEILAIREACAKLGTEHLVGATIYVLAHPCP 80

Query: 85 MCAAAI 90
          MC  ++
Sbjct: 81 MCLGSL 86


>gi|242802981|ref|XP_002484082.1| cytosine deaminase, putative [Talaromyces stipitatus ATCC 10500]
 gi|218717427|gb|EED16848.1| cytosine deaminase, putative [Talaromyces stipitatus ATCC 10500]
          Length = 148

 Score = 52.4 bits (124), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 34/102 (33%), Positives = 48/102 (47%), Gaps = 2/102 (1%)

Query: 11  ALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQE 69
           A+EEA+       +P+GA  V  + KI+ R  N   +    T H EI A+    R L   
Sbjct: 10  AVEEARQGQAEGGVPIGACLVSKDGKILGRGHNMRFQKGSATLHGEISALENSGR-LPAS 68

Query: 70  ILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIE 111
                 +Y TL PC MC  A  L +++R+  G +N   GG E
Sbjct: 69  AYEGATMYTTLSPCDMCTGACILYKVKRVVVGENNNFLGGEE 110


>gi|194212402|ref|XP_001914792.1| PREDICTED: similar to hCG22695 [Equus caballus]
          Length = 371

 Score = 52.4 bits (124), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 33/101 (32%), Positives = 55/101 (54%), Gaps = 12/101 (11%)

Query: 54  AEILAIRMG-CRILSQEI------LPEV----DLYVTLEPCTMCAAAISLARIRRLYYGA 102
           A   A+R+G  R L +++      LP V    DLYVT EPC MCA A+  +R++R++YGA
Sbjct: 271 ASAQAVRVGSVRKLDEDVDTDEDGLPYVCTGYDLYVTREPCAMCAMALVHSRVQRVFYGA 330

Query: 103 SNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQD 143
            +P  G +    + +     +H  +++ G+ E   R++  D
Sbjct: 331 PSPD-GALGTRLRLHARPDLNHRFQVFRGVLEAACRRLDPD 370


>gi|33593821|ref|NP_881465.1| hypothetical protein BP2880 [Bordetella pertussis Tohama I]
 gi|33563894|emb|CAE43152.1| conserved hypothetical protein [Bordetella pertussis Tohama I]
 gi|332383223|gb|AEE68070.1| hypothetical protein BPTD_2832 [Bordetella pertussis CS]
          Length = 169

 Score = 52.4 bits (124), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 28/80 (35%), Positives = 42/80 (52%)

Query: 25  PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84
           P GA+   +  +++R  NR     D TAH E+LA+R   R L    L    +Y + +PC 
Sbjct: 37  PFGALVAKDGVVLARGVNRMLADHDPTAHTELLALREAGRALRSARLDGCVVYASGQPCP 96

Query: 85  MCAAAISLARIRRLYYGASN 104
           MC AA+ ++ + R  Y  SN
Sbjct: 97  MCLAAMRMSGVARAVYAYSN 116


>gi|229492959|ref|ZP_04386754.1| tRNA-specific adenosine deaminase [Rhodococcus erythropolis SK121]
 gi|229319989|gb|EEN85815.1| tRNA-specific adenosine deaminase [Rhodococcus erythropolis SK121]
          Length = 166

 Score = 52.4 bits (124), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 33/106 (31%), Positives = 55/106 (51%), Gaps = 3/106 (2%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           ++ AL+ A+      E+P+GAV   +++++ RA  + R L     HA++ A+      L 
Sbjct: 9   LAVALDVAREGMELGEMPIGAVVFDDDRVLGRAYTQERALGRRVVHADLQALLQADEALG 68

Query: 68  -QEILPEVDLYVTLEPCTMC-AAAISLARIRRLYYGASNPKGGGIE 111
                 E+ L V LEPC MC  AAI+L  + R+++   +P  G  E
Sbjct: 69  FTRASGELTLAVNLEPCLMCMGAAITLG-VTRVWFALESPNDGAAE 113


>gi|311248289|ref|XP_003123051.1| PREDICTED: LOW QUALITY PROTEIN: tRNA-specific adenosine
           deaminase-like protein 3-like [Sus scrofa]
          Length = 351

 Score = 52.4 bits (124), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 41/121 (33%), Positives = 62/121 (51%), Gaps = 20/121 (16%)

Query: 40  AGNRNRELKDVTAH--------AEILAIRMG-CRILSQEI--LPEV----DLYVTLEPCT 84
           A  + R   D+T H        A   ++R+G  R L +++  LP V    DLYVT EPC 
Sbjct: 233 AQGQGRGTYDLTHHPACSFAPAAAPESVRVGSVRKLEEDMDGLPYVCTGYDLYVTREPCA 292

Query: 85  MCAAAISLARIRRLYYGASNPKGGGIENGTQF--YTLATCHHSPEIYPGISEQRSRQIIQ 142
           MCA A+  +R+RR++YGA +P G     GT F  +     +H  + + G+ E +  Q+  
Sbjct: 293 MCAMALVHSRVRRVFYGAPSPDGA---LGTHFRIHARPDLNHRFQAFRGVLEAQCCQLDP 349

Query: 143 D 143
           D
Sbjct: 350 D 350


>gi|126644134|ref|XP_001388203.1| cytidine and deoxycytidylate deaminase family [Cryptosporidium
           parvum Iowa II]
 gi|126117276|gb|EAZ51376.1| cytidine and deoxycytidylate deaminase family, putative
           [Cryptosporidium parvum Iowa II]
          Length = 186

 Score = 52.4 bits (124), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 46/162 (28%), Positives = 74/162 (45%), Gaps = 33/162 (20%)

Query: 15  AQNAALRNEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILA-------------- 58
           ++ A   NE+PVG V V     +I S A N     ++ T H EI+A              
Sbjct: 1   SEFAVKSNEVPVGCVIVNRTTKEIESEAHNETNISRNGTRHCEIVALEKLIVKLKSTSGK 60

Query: 59  IRMGCRILSQEI-----------LPEV-DLYVTLEPCTMCAAAISLARIRRLYYGASNPK 106
           I    R+++Q             L ++ DL+VT+EPC MC   I    I  ++YG  N +
Sbjct: 61  INNSTRLITQNQDEYSNTRFRINLGDIYDLFVTVEPCIMCIGFIDQMGIHNIFYGCKNYR 120

Query: 107 GGGIENGTQFYTLATCHHSPEIY--PGISEQRSRQIIQDFFK 146
            GG  +   ++ L   + S +I    GI E  S +I+++F++
Sbjct: 121 FGGCGSVLDYHHL---NKSSKIILTSGICENESIKILKEFYE 159


>gi|318042353|ref|ZP_07974309.1| putative cytosine deaminase [Synechococcus sp. CB0101]
          Length = 144

 Score = 52.4 bits (124), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 33/96 (34%), Positives = 47/96 (48%), Gaps = 4/96 (4%)

Query: 7   FMSCALEEAQNAALRNEIPVGAV-AVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
            M  A +EAQ + +   IP+GAV A  +  I++R  N+  +  D T+H E   IR   R 
Sbjct: 4   LMDAARQEAQQSWMEGGIPIGAVLAREDGTIVARGHNQRVQNGDPTSHGETQCIRNAGR- 62

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
             +    ++ L  TL PC MCA    L   RR+  G
Sbjct: 63  --RRDWRDLTLVTTLSPCPMCAGTAVLLGFRRVLIG 96


>gi|281347275|gb|EFB22859.1| hypothetical protein PANDA_015525 [Ailuropoda melanoleuca]
          Length = 353

 Score = 52.4 bits (124), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 26/68 (38%), Positives = 43/68 (63%), Gaps = 5/68 (7%)

Query: 75  DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF--YTLATCHHSPEIYPGI 132
           DLYVT EPC MCA A+  +R++R++YGA +P G     GT+F  +     +H  +++ G+
Sbjct: 287 DLYVTHEPCAMCAMALVHSRVQRVFYGAPSPDGA---LGTRFRIHARPDLNHRFQVFRGV 343

Query: 133 SEQRSRQI 140
            E + R++
Sbjct: 344 LEAQCRRL 351


>gi|301781056|ref|XP_002925950.1| PREDICTED: LOW QUALITY PROTEIN: tRNA-specific adenosine
           deaminase-like protein 3-like [Ailuropoda melanoleuca]
          Length = 371

 Score = 52.4 bits (124), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 26/68 (38%), Positives = 43/68 (63%), Gaps = 5/68 (7%)

Query: 75  DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF--YTLATCHHSPEIYPGI 132
           DLYVT EPC MCA A+  +R++R++YGA +P G     GT+F  +     +H  +++ G+
Sbjct: 303 DLYVTHEPCAMCAMALVHSRVQRVFYGAPSPDGA---LGTRFRIHARPDLNHRFQVFRGV 359

Query: 133 SEQRSRQI 140
            E + R++
Sbjct: 360 LEAQCRRL 367


>gi|320333701|ref|YP_004170412.1| CMP/dCMP deaminase zinc-binding protein [Deinococcus maricopensis
           DSM 21211]
 gi|319754990|gb|ADV66747.1| CMP/dCMP deaminase zinc-binding protein [Deinococcus maricopensis
           DSM 21211]
          Length = 184

 Score = 52.0 bits (123), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 38/111 (34%), Positives = 56/111 (50%), Gaps = 13/111 (11%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELK------DVT-AHAEI-L 57
           ++   L  A+ A  +   PVGAV V  +  II+R  NR  E +      D + AHAE+ L
Sbjct: 6   YLQETLRLAREAQTQGSAPVGAVLVNEHGDIIARGRNRVGEAQTPQHVGDASVAHAEMDL 65

Query: 58  AIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGG 108
             ++G     Q +     LY +LEPC MC  A +L  +RR+ +   +P GG
Sbjct: 66  YFQIGKLKDPQHLT----LYTSLEPCLMCGGASALLGVRRIVWATDDPWGG 112


>gi|323331315|gb|EGA72733.1| Fcy1p [Saccharomyces cerevisiae AWRI796]
          Length = 153

 Score = 52.0 bits (123), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 42/145 (28%), Positives = 65/145 (44%), Gaps = 15/145 (10%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNK---IISRAGNRNRELKDVTAHAEILAIRMGCR 64
           M  A EEA        +P+G   ++NNK   ++ R  N   +    T H EI  +   C 
Sbjct: 10  MDIAYEEAALGYKEGGVPIGG-CLINNKDGSVLGRGHNMRFQKGSATLHGEISTLE-NCG 67

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS-NPKGGGIENGTQFYTLATCH 123
            L  ++  +  LY TL PC MC  AI +  I R   G + N K      G ++  L T  
Sbjct: 68  RLEGKVYKDTTLYTTLSPCDMCTGAIIMYGIPRCVVGENVNFK----SKGEKY--LQTRG 121

Query: 124 HSPEIYPGISEQRSRQIIQDFFKER 148
           H   +   + ++R ++I++ F  ER
Sbjct: 122 HEVVV---VDDERCKKIMKQFIDER 143


>gi|87307959|ref|ZP_01090102.1| cytosine deaminase [Blastopirellula marina DSM 3645]
 gi|87289573|gb|EAQ81464.1| cytosine deaminase [Blastopirellula marina DSM 3645]
          Length = 145

 Score = 52.0 bits (123), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 28/95 (29%), Positives = 49/95 (51%), Gaps = 1/95 (1%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           F+  A+EEA+       IP+G+V V++ ++  +  NR  +      HAE+  +    R+ 
Sbjct: 4   FLKLAIEEARKGLAEGGIPIGSVLVVDGQVRGQGHNRRVQKGSAILHAEMDCLEAAGRLT 63

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
           +++    V LY TL PC MC+    L +I ++  G
Sbjct: 64  AKDYQRAV-LYSTLSPCDMCSGTALLYKIPKIVIG 97


>gi|328876514|gb|EGG24877.1| cytidine deaminase-like protein [Dictyostelium fasciculatum]
          Length = 504

 Score = 52.0 bits (123), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 21/65 (32%), Positives = 40/65 (61%)

Query: 76  LYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQ 135
           LY++ EPC MC+ A+  +RI R+ YG+    GGG+ +  + +T  + +H  ++Y G+ E+
Sbjct: 390 LYLSREPCVMCSMALVHSRIERVIYGSQQHNGGGLGSCFRIHTEKSVNHKFQVYRGLMEK 449

Query: 136 RSRQI 140
              ++
Sbjct: 450 ECLEL 454


>gi|291244537|ref|XP_002742156.1| PREDICTED: tRNA-specific adenosine deaminase 3-like [Saccoglossus
           kowalevskii]
          Length = 381

 Score = 52.0 bits (123), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 25/68 (36%), Positives = 41/68 (60%), Gaps = 1/68 (1%)

Query: 75  DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISE 134
           DLY+T EPC MCA A+  +RI R++YG   P  G + +  + +T +  +H  E++ GI E
Sbjct: 314 DLYITHEPCIMCAMALVHSRINRVFYGIMCPN-GALGSRYKIHTQSGLNHHFEVFKGILE 372

Query: 135 QRSRQIIQ 142
               Q+++
Sbjct: 373 LDCNQLLK 380


>gi|225387920|ref|ZP_03757684.1| hypothetical protein CLOSTASPAR_01690 [Clostridium asparagiforme
           DSM 15981]
 gi|225045989|gb|EEG56235.1| hypothetical protein CLOSTASPAR_01690 [Clostridium asparagiforme
           DSM 15981]
          Length = 161

 Score = 52.0 bits (123), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 31/80 (38%), Positives = 39/80 (48%), Gaps = 1/80 (1%)

Query: 25  PVGAV-AVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83
           P GA+ A     I+    N     K  T HAE  A     ++ S+E L +  LY T EPC
Sbjct: 27  PFGALLADKEGNILLEQPNVEITEKKCTGHAETQAAERASQLYSREFLKDCTLYTTAEPC 86

Query: 84  TMCAAAISLARIRRLYYGAS 103
            MCA AI  A I R+ YG +
Sbjct: 87  AMCAGAIYWAGIGRVVYGMT 106


>gi|269119566|ref|YP_003307743.1| CMP/dCMP deaminase zinc-binding protein [Sebaldella termitidis ATCC
           33386]
 gi|268613444|gb|ACZ07812.1| CMP/dCMP deaminase zinc-binding protein [Sebaldella termitidis ATCC
           33386]
          Length = 160

 Score = 52.0 bits (123), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 34/106 (32%), Positives = 45/106 (42%), Gaps = 1/106 (0%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIR 60
           K    ++  A+E ++ A      P GA+ V     II   GN     K  T HAE     
Sbjct: 4   KSHEFYLERAIEVSKEARESGNTPFGAILVDKEGNIIMEQGNIEITAKKCTGHAEASLAE 63

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPK 106
                 S+E L +  LY T EPC MCA AI  A I  + Y  +  +
Sbjct: 64  RASHEYSKEFLWDCTLYTTAEPCCMCAGAIYWANIGTVAYAMTEKR 109


>gi|71653641|ref|XP_815455.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
 gi|70880510|gb|EAN93604.1| hypothetical protein, conserved [Trypanosoma cruzi]
          Length = 408

 Score = 51.6 bits (122), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 19/57 (33%), Positives = 37/57 (64%)

Query: 73  EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIY 129
           E+DL+V+ EPC MC+ A+  +R+RR++Y  +NP  GG+ +    + + + +H   ++
Sbjct: 320 EIDLFVSHEPCVMCSMALVHSRVRRVFYCFANPTHGGLGSVFSIHAIPSLNHHFRVF 376


>gi|57102218|ref|XP_542193.1| PREDICTED: similar to CG10927-PA [Canis familiaris]
          Length = 355

 Score = 51.6 bits (122), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 25/68 (36%), Positives = 43/68 (63%), Gaps = 5/68 (7%)

Query: 75  DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF--YTLATCHHSPEIYPGI 132
           DLY+T EPC MCA A+  +R++R++YGA +P G     GT+F  +     +H  +++ G+
Sbjct: 287 DLYITREPCAMCAMALVHSRVQRVFYGAPSPDGA---LGTRFRIHARPDLNHRFQVFRGV 343

Query: 133 SEQRSRQI 140
            E + R++
Sbjct: 344 LEAQCRRL 351


>gi|154305221|ref|XP_001553013.1| hypothetical protein BC1G_08905 [Botryotinia fuckeliana B05.10]
 gi|150853647|gb|EDN28839.1| hypothetical protein BC1G_08905 [Botryotinia fuckeliana B05.10]
          Length = 243

 Score = 51.6 bits (122), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 47/156 (30%), Positives = 62/156 (39%), Gaps = 50/156 (32%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAI------ 59
           M  AL  A  A   NE PVG V V     K+++R  N      + T HAE +AI      
Sbjct: 1   MREALAMANLALSTNETPVGCVLVDPTLKKVVARGMNATNRSYNGTRHAEFIAIDELLSS 60

Query: 60  ----------------------RMGC------------RILSQEILPEVDLYVTLEPCTM 85
                                  + C            R    E +  +DLYVT+EPC M
Sbjct: 61  SPKVERGDVDENRSVKRKRGESEIECHDEKVDESENSKRSYGPEDMRSLDLYVTIEPCIM 120

Query: 86  CAAAISLARIRRLYYGASNPKGGG--------IENG 113
           CA+ +    IR+++YGA N K GG        +ENG
Sbjct: 121 CASLLQQFGIRKVWYGAVNDKFGGNGGVLNIHVENG 156


>gi|331004720|ref|ZP_08328174.1| hypothetical protein HMPREF0491_03036 [Lachnospiraceae oral taxon
           107 str. F0167]
 gi|330409099|gb|EGG88557.1| hypothetical protein HMPREF0491_03036 [Lachnospiraceae oral taxon
           107 str. F0167]
          Length = 160

 Score = 51.6 bits (122), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 34/103 (33%), Positives = 45/103 (43%), Gaps = 1/103 (0%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIR 60
           KK   ++   +E +QNA      P GA+ V    KI+    N     K  T HAE     
Sbjct: 4   KKHEYYLRRCIEISQNARNNGNTPFGAILVDEYGKILLEQENIEITGKICTGHAETTLAE 63

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
               + S+E L    LY T EPC MC  AI  A I R+ +  +
Sbjct: 64  RASHLYSKEFLWRCTLYTTAEPCAMCTGAIYWANIGRVVFAMT 106


>gi|189485534|ref|YP_001956475.1| riboflavin biosynthesis protein RibD [uncultured Termite group 1
           bacterium phylotype Rs-D17]
 gi|170287493|dbj|BAG14014.1| riboflavin biosynthesis protein RibD [uncultured Termite group 1
           bacterium phylotype Rs-D17]
          Length = 355

 Score = 51.6 bits (122), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 48/160 (30%), Positives = 73/160 (45%), Gaps = 36/160 (22%)

Query: 4   GNVFMSCALEEAQNAALR--NEIPVGAVAVLNNKIISRA------GNRNRELKDVTAHAE 55
           GN +M  AL+ AQ    R      VG V V +NKI+ R       GN          HAE
Sbjct: 3   GNKYMQLALDLAQKGKGRVYTNPLVGCVIVKDNKIVGRGWHQCFGGN----------HAE 52

Query: 56  ILAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGG 109
           + AI     I + +     DLYVTLEPC      T C   I  A I+R+YY   +     
Sbjct: 53  VNAI-----IDAGKNAEGADLYVTLEPCNSYGKRTPCTLTIIKAGIKRVYYAVPD---SN 104

Query: 110 IENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
           +  G +        ++ +++ G+ +++SR +I+D+ K  +
Sbjct: 105 VSGGREILE----RNNIKVHEGLLKKQSRILIKDYLKHLK 140


>gi|322821975|gb|EFZ28159.1| hypothetical protein TCSYLVIO_5619 [Trypanosoma cruzi]
          Length = 384

 Score = 51.6 bits (122), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 19/57 (33%), Positives = 37/57 (64%)

Query: 73  EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIY 129
           E+DL+V+ EPC MC+ A+  +R+RR++Y  +NP  GG+ +    + + + +H   ++
Sbjct: 296 EIDLFVSHEPCVMCSMALVHSRVRRVFYCFANPTHGGLGSVFSIHAIPSLNHHFRVF 352


>gi|152981801|ref|YP_001353377.1| hypothetical protein mma_1687 [Janthinobacterium sp. Marseille]
 gi|151281878|gb|ABR90288.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille]
          Length = 150

 Score = 51.6 bits (122), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 32/98 (32%), Positives = 47/98 (47%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           F+  A+  AQ+   R   P GAV  +  + I+   N      D T HAE+ AIR+  + L
Sbjct: 8   FLREAVRLAQDNKARGGRPFGAVLAVGGESIAIGVNNIVHSNDPTTHAEMEAIRVASQKL 67

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASN 104
            +  L    +Y +  PC MC AA+ L  +  +YY   N
Sbjct: 68  GRPNLKGSVIYASGHPCPMCLAAMLLTGVDEVYYAFDN 105


>gi|196001961|ref|XP_002110848.1| hypothetical protein TRIADDRAFT_54182 [Trichoplax adhaerens]
 gi|190586799|gb|EDV26852.1| hypothetical protein TRIADDRAFT_54182 [Trichoplax adhaerens]
          Length = 283

 Score = 51.6 bits (122), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 22/66 (33%), Positives = 37/66 (56%)

Query: 75  DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISE 134
           DLYVT EPC MCA A+  +RI+R++Y   + + G + +  + +     +H  E++  I  
Sbjct: 217 DLYVTKEPCVMCAMALVHSRIKRVFYAVEDKEYGALGSRYKIHVHEGLNHHFEVFKNIYR 276

Query: 135 QRSRQI 140
            R  Q+
Sbjct: 277 DRCLQL 282


>gi|266622681|ref|ZP_06115616.1| putative cytosine deaminase [Clostridium hathewayi DSM 13479]
 gi|288865589|gb|EFC97887.1| putative cytosine deaminase [Clostridium hathewayi DSM 13479]
          Length = 160

 Score = 51.6 bits (122), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 32/98 (32%), Positives = 46/98 (46%), Gaps = 1/98 (1%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           ++  A+E ++ A      P GA+ V  +  I+   GN     K  T HAE          
Sbjct: 9   YLRRAIEISKEARAAGNTPFGALLVNKDGDIVMEQGNIEITDKICTGHAEATLAARASHE 68

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
            +++ L +  LY T EPC MCA AI  A I R+ YG +
Sbjct: 69  FTKDYLWDCTLYTTAEPCAMCAGAIYWANIGRVVYGMT 106


>gi|224370210|ref|YP_002604374.1| RibD [Desulfobacterium autotrophicum HRM2]
 gi|223692927|gb|ACN16210.1| RibD [Desulfobacterium autotrophicum HRM2]
          Length = 381

 Score = 51.6 bits (122), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 48/154 (31%), Positives = 69/154 (44%), Gaps = 31/154 (20%)

Query: 5   NVFMS---CALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           N FM    C  E+ +     N + VGAV V NN+++ +  ++   L    AHAE+ AI  
Sbjct: 18  NSFMEQAICLAEQGRGYTAPNPM-VGAVVVKNNQVVGQGWHKGPGL----AHAEVNAIDD 72

Query: 62  GCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPK----GGGIE 111
                + ++    DLYVTLEPC        C   I  A IRR++ G  +P     GGGI 
Sbjct: 73  -----AGDLARGSDLYVTLEPCNHTGRTPPCTEKILRAGIRRVFVGTEDPNPFVAGGGI- 126

Query: 112 NGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
              +F           +  GI  + S  +I+DF 
Sbjct: 127 ---KFLK----ERGVAVKVGICRRASETLIEDFI 153


>gi|119715379|ref|YP_922344.1| guanine deaminase [Nocardioides sp. JS614]
 gi|119536040|gb|ABL80657.1| Guanine deaminase [Nocardioides sp. JS614]
          Length = 158

 Score = 51.6 bits (122), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 31/80 (38%), Positives = 40/80 (50%), Gaps = 3/80 (3%)

Query: 42  NRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
           NR     D TAHAE+ AIR  C  L    L    LY + EPC +C  A   AR+ R+ Y 
Sbjct: 44  NRVTRDLDPTAHAEVTAIRQACAALGDFSLTGCVLYASCEPCPLCLTASLWARLDRVVYA 103

Query: 102 AS--NPKGGGIENGTQFYTL 119
           A   +   GG ++  +FY L
Sbjct: 104 ADRHDAARGGFDD-REFYDL 122


>gi|289522481|ref|ZP_06439335.1| putative cytosine deaminase [Anaerobaculum hydrogeniformans ATCC
           BAA-1850]
 gi|289504317|gb|EFD25481.1| putative cytosine deaminase [Anaerobaculum hydrogeniformans ATCC
           BAA-1850]
          Length = 165

 Score = 51.6 bits (122), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 28/99 (28%), Positives = 47/99 (47%), Gaps = 1/99 (1%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           ++  A+E ++ A      P GAV V     ++   GN     K  T HAE++ +    +I
Sbjct: 13  YLRLAIETSRKARESGNTPFGAVLVGPEGDVLLEQGNVEITEKRCTGHAELVLVEKASQI 72

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASN 104
             ++ L +  LY ++EPC MC  AI  + +  + Y  S 
Sbjct: 73  YDKDFLWQCILYTSVEPCAMCTGAIYWSNVGTIIYALSE 111


>gi|156843603|ref|XP_001644868.1| hypothetical protein Kpol_1065p25 [Vanderwaltozyma polyspora DSM
           70294]
 gi|156115520|gb|EDO17010.1| hypothetical protein Kpol_1065p25 [Vanderwaltozyma polyspora DSM
           70294]
          Length = 154

 Score = 51.6 bits (122), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 31/96 (32%), Positives = 41/96 (42%), Gaps = 3/96 (3%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLN--NKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M  A EEA        +P+G   + N   KI+ R  N   +    T H EI  +   C  
Sbjct: 11  MDVAYEEASKGYEEGGVPIGGCLINNEDGKILGRGHNMRFQKGSATLHGEISTLE-NCGR 69

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
           L  ++     LY TL PC MC  AI +  I R+  G
Sbjct: 70  LEGKVYKNTTLYTTLSPCDMCTGAILMYGIPRVVVG 105


>gi|323357173|ref|YP_004223569.1| cytosine/adenosine deaminase [Microbacterium testaceum StLB037]
 gi|323273544|dbj|BAJ73689.1| cytosine/adenosine deaminase [Microbacterium testaceum StLB037]
          Length = 159

 Score = 51.2 bits (121), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 38/80 (47%)

Query: 25  PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84
           P GA+ V  +  +  A N     +DVT HAE   +R   + L    LP   LY + EPC 
Sbjct: 30  PFGALLVTADGRVVEAENTVLTERDVTGHAETNLVRRVWKDLDAAELPASTLYTSCEPCA 89

Query: 85  MCAAAISLARIRRLYYGASN 104
           MC  AI  A I R+ Y  S 
Sbjct: 90  MCCGAIFWAGIGRVVYALSG 109


>gi|284031454|ref|YP_003381385.1| CMP/dCMP deaminase zinc-binding protein [Kribbella flavida DSM
           17836]
 gi|283810747|gb|ADB32586.1| CMP/dCMP deaminase zinc-binding protein [Kribbella flavida DSM
           17836]
          Length = 143

 Score = 51.2 bits (121), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 32/141 (22%), Positives = 67/141 (47%), Gaps = 8/141 (5%)

Query: 7   FMSCALEEAQNAALRNEIPVGAV-AVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           F+  A+E A  A      P G++ A  +  +++   N +    D+TAH E+   R     
Sbjct: 9   FLRRAIELAATADKSGNPPFGSLLAGPDGTVLAEDHNTSVTDNDITAHPELKLARWAAAN 68

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           L+ ++     +Y + +PC MC+ A+  + + R+ Y  S  +   ++ G  F  +      
Sbjct: 69  LTPDVAAGTTMYTSCQPCRMCSGALERSGLGRVVYALSGDQLNALKPGGGFAPV------ 122

Query: 126 PEIYPGISEQRSRQIIQDFFK 146
           PE  P + ++  R ++++++K
Sbjct: 123 PEDGPALYDE-GRAVVENYYK 142


>gi|85001518|ref|XP_955475.1| cytidine and deoxycytidylate deaminase family protein [Theileria
           annulata strain Ankara]
 gi|65303621|emb|CAI75999.1| cytidine and deoxycytidylate deaminase family protein, putative
           [Theileria annulata]
          Length = 183

 Score = 51.2 bits (121), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 38/119 (31%), Positives = 53/119 (44%), Gaps = 15/119 (12%)

Query: 6   VFMSCALEEAQNAALRNEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
           +FM  ALEEA+ A  + EI V  + V     ++++ + N      + T H E+ AI    
Sbjct: 11  IFMKLALEEAKKALDKEEIAVACIIVSKATREVVASSSNATNLTYNSTWHCELEAINKLI 70

Query: 64  RILSQEILPEVD------------LYVTLEPCTMCAAAISLARIRRL-YYGASNPKGGG 109
            +       E D            L+VT EPC MC  A+ +  I  L YYG  N K GG
Sbjct: 71  DMEPNGYKSEQDSEKLREFCSGFALFVTCEPCIMCTTALQIIGIFLLMYYGCKNEKFGG 129


>gi|283781867|ref|YP_003372622.1| CMP/dCMP deaminase zinc-binding protein [Pirellula staleyi DSM
           6068]
 gi|283440320|gb|ADB18762.1| CMP/dCMP deaminase zinc-binding protein [Pirellula staleyi DSM
           6068]
          Length = 157

 Score = 51.2 bits (121), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 39/102 (38%), Positives = 54/102 (52%), Gaps = 14/102 (13%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           +M  A+E A++     ++P GAV V   + KII  AG  N+   + T H EI+A+     
Sbjct: 16  YMRAAIELARHVP---QLPFGAVIVDRSSGKII--AGGFNQSAMNPTWHGEIVALN---- 66

Query: 65  ILSQEIL---PEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
            L+Q  L   P + LY T EPC MC  AI  ++I  L YG S
Sbjct: 67  DLAQRGLHDRPSLALYTTAEPCPMCMGAILWSQIEELIYGTS 108


>gi|154150488|ref|YP_001404106.1| cytosine deaminase [Candidatus Methanoregula boonei 6A8]
 gi|153999040|gb|ABS55463.1| Cytosine deaminase [Methanoregula boonei 6A8]
          Length = 177

 Score = 51.2 bits (121), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 46/93 (49%), Gaps = 1/93 (1%)

Query: 11  ALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEI 70
           A+ EA+       IP+G+V V++ KI+ R  NR  +      HAE+  +    R   +E 
Sbjct: 39  AILEARKGLAEGGIPIGSVLVIDGKIVGRGHNRRVQNNSAILHAEMDCLENAGRRTPKE- 97

Query: 71  LPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
                L+ TL PC MC+  + L +I R+  G +
Sbjct: 98  YKRATLFSTLSPCDMCSGVVLLYKIPRVVIGEN 130


>gi|126728506|ref|ZP_01744322.1| hypothetical protein SSE37_20987 [Sagittula stellata E-37]
 gi|126711471|gb|EBA10521.1| hypothetical protein SSE37_20987 [Sagittula stellata E-37]
          Length = 156

 Score = 51.2 bits (121), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 29/84 (34%), Positives = 41/84 (48%), Gaps = 3/84 (3%)

Query: 33  NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISL 92
            + +++R  N      D + HAEI+AI   CR L    L    L  TL+PC MC  AI  
Sbjct: 38  GDTLLARGANEVHLNHDPSRHAEIVAISAACRALGTADLSGCTLLTTLQPCEMCLGAIRF 97

Query: 93  ARIRRLYYGASNPKGGGIENGTQF 116
           A I R+ + A   + GG++    F
Sbjct: 98  AGIGRVIFAA---RKGGVQADKYF 118


>gi|50083486|ref|YP_044996.1| putative cytidine and deoxycytidylate deaminase zinc-binding
           protein [Acinetobacter sp. ADP1]
 gi|49529462|emb|CAG67174.1| putative cytidine and deoxycytidylate deaminase zinc-binding
           protein [Acinetobacter sp. ADP1]
          Length = 184

 Score = 51.2 bits (121), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 32/84 (38%), Positives = 41/84 (48%), Gaps = 2/84 (2%)

Query: 25  PVGAVAV-LNNKIISRAGNRN-RELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEP 82
           P  A+ V  +  I++ AGN +     D T HAE +A     R+ S + L    LY   EP
Sbjct: 52  PFAAIVVDADGNIVTEAGNNSLPPTGDPTRHAETVAAGQAARLKSLKELRTCTLYTNAEP 111

Query: 83  CTMCAAAISLARIRRLYYGASNPK 106
           C MCA AI    I R+ YG S  K
Sbjct: 112 CAMCAGAIYWTGIGRVVYGMSEKK 135


>gi|50286109|ref|XP_445483.1| hypothetical protein [Candida glabrata CBS 138]
 gi|49524788|emb|CAG58394.1| unnamed protein product [Candida glabrata]
 gi|109706861|gb|ABG43005.1| cytosine deaminase [Candida glabrata]
 gi|109706865|gb|ABG43007.1| cytosine deaminase [Candida glabrata]
          Length = 155

 Score = 51.2 bits (121), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 45/100 (45%), Gaps = 5/100 (5%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNK---IISRAGNRNRELKDVTAHAEILAIRMGCR 64
           M  A EEA        +P+G   ++NNK   ++ R  N   +    T H EI  +   C 
Sbjct: 12  MKIAYEEAAKGFEEGGVPIGG-CLINNKDGTVLGRGHNMRFQKGSPTLHGEISTLE-NCG 69

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASN 104
            L  ++  +  LY TL PC MC  AI L  I R   G S+
Sbjct: 70  RLEGKVYKDTTLYTTLSPCDMCTGAILLYGIPRCVIGESD 109


>gi|289583345|ref|YP_003481755.1| CMP/dCMP deaminase zinc-binding protein [Natrialba magadii ATCC
           43099]
 gi|289532843|gb|ADD07193.1| CMP/dCMP deaminase zinc-binding protein [Natrialba magadii ATCC
           43099]
          Length = 156

 Score = 51.2 bits (121), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 28/93 (30%), Positives = 43/93 (46%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  A + A+ A  R + P G+V V +N ++  A NR     D+  H E+       R   
Sbjct: 12  MHRAFDLAREAVARGDRPFGSVLVRDNTVVDSASNRVVTEDDIRRHPELHLAYRAVRGFD 71

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
                E+ +Y + EPC MCA  +  A + R+ Y
Sbjct: 72  PAGRAELVMYTSTEPCPMCAGGLVSAGLDRIVY 104


>gi|307102708|gb|EFN50977.1| hypothetical protein CHLNCDRAFT_33285 [Chlorella variabilis]
          Length = 167

 Score = 51.2 bits (121), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 31/103 (30%), Positives = 48/103 (46%), Gaps = 4/103 (3%)

Query: 5   NVFMSCALEEAQNAALRNEIP--VGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAIR 60
             +M  A+E +  A L  +     GA+ V     +++    N+     D T H E+ AIR
Sbjct: 8   ETYMKRAIELSAKAGLEEQTGGCFGALIVDKETGEVVGEGYNKVILNNDPTWHGEMEAIR 67

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
             C+      +P    Y + +PC MC  AI  AR+  +YYGA+
Sbjct: 68  EACKARGSPHIPGTVCYTSAQPCPMCYTAIMWARVDHVYYGAT 110


>gi|11245466|gb|AAG33626.1|AF312392_1 cytosine deaminase-uracil phosphoribosyltransferase fusion protein
           [synthetic construct]
          Length = 373

 Score = 51.2 bits (121), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 42/145 (28%), Positives = 64/145 (44%), Gaps = 15/145 (10%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNK---IISRAGNRNRELKDVTAHAEILAIRMGCR 64
           M  A EEA        +P+G   ++NNK   ++ R  N   +    T H EI  +   C 
Sbjct: 15  MDIAYEEAALGYKEGGVPIGG-CLINNKDGSVLGRGHNMRFQKGSATLHGEISTLE-NCG 72

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS-NPKGGGIENGTQFYTLATCH 123
            L  ++  +  LY TL PC MC  AI +  I R   G + N K  G +       L T  
Sbjct: 73  RLEGKVYKDTTLYTTLSPCDMCTGAIIMYGIPRCVVGENVNFKSKGEK------YLQTRG 126

Query: 124 HSPEIYPGISEQRSRQIIQDFFKER 148
           H   +   + ++R ++I++ F  ER
Sbjct: 127 HEVVV---VDDERCKKIMKQFIDER 148


>gi|320164019|gb|EFW40918.1| tRNA-specific adenosine deaminase 2 [Capsaspora owczarzaki ATCC
           30864]
          Length = 307

 Score = 51.2 bits (121), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 28/71 (39%), Positives = 37/71 (52%)

Query: 39  RAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98
           RAG+ +         +  L+ R      S +I    DLYVT+EPC MCAAA+ L  I  +
Sbjct: 162 RAGSLSASPHSPPTLSLFLSERATSVATSTQIFQHCDLYVTVEPCVMCAAALRLVGIGAV 221

Query: 99  YYGASNPKGGG 109
           YYG  N + GG
Sbjct: 222 YYGCGNDRFGG 232



 Score = 42.7 bits (99), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 25/55 (45%), Positives = 31/55 (56%), Gaps = 2/55 (3%)

Query: 7  FMSCALEEAQNAALRNEIPVGAVAVL--NNKIISRAGNRNRELKDVTAHAEILAI 59
          FM  AL++A  A    E+PVG V VL    ++I R  NR  E K+ T HAE  AI
Sbjct: 21 FMQSALDKAYEALEVGEVPVGCVIVLRETGQVIGRGCNRTNETKNATRHAEFEAI 75


>gi|109706863|gb|ABG43006.1| cytosine deaminase [Candida glabrata]
          Length = 155

 Score = 51.2 bits (121), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 45/100 (45%), Gaps = 5/100 (5%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNK---IISRAGNRNRELKDVTAHAEILAIRMGCR 64
           M  A EEA        +P+G   ++NNK   ++ R  N   +    T H EI  +   C 
Sbjct: 12  MKIAYEEAAKGFEEGGVPIGG-CLINNKDGTVLGRGHNMRFQKGSPTLHGEISTLE-NCG 69

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASN 104
            L  ++  +  LY TL PC MC  AI L  I R   G S+
Sbjct: 70  RLEGKVYKDTTLYTTLSPCDMCTGAILLYGIPRCVIGESD 109


>gi|67464322|pdb|1YSD|A Chain A, Yeast Cytosine Deaminase Double Mutant
 gi|67464323|pdb|1YSD|B Chain B, Yeast Cytosine Deaminase Double Mutant
          Length = 161

 Score = 51.2 bits (121), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 41/145 (28%), Positives = 65/145 (44%), Gaps = 15/145 (10%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNK---IISRAGNRNRELKDVTAHAEILAIRMGCR 64
           M  A EEA        +P+G   ++NNK   ++ R  N   +    T H EI  +   C 
Sbjct: 18  MDIAYEEALLGYKEGGVPIGG-CLINNKDGSVLGRGHNMRFQKGSATLHGEISTLE-NCG 75

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS-NPKGGGIENGTQFYTLATCH 123
            L  ++  +  LY TL PC MC  AI +  I R   G + N K      G ++  L T  
Sbjct: 76  RLEGKVYKDTTLYTTLSPCDMCTGAIIMYGIPRCVVGENVNFK----SKGEKY--LQTRG 129

Query: 124 HSPEIYPGISEQRSRQIIQDFFKER 148
           H   +   + ++R +++++ F  ER
Sbjct: 130 HEVVV---VDDERCKKLMKQFIDER 151


>gi|110669248|ref|YP_659059.1| cytosine/adenosine deaminases [Haloquadratum walsbyi DSM 16790]
 gi|109626995|emb|CAJ53471.1| cytosine/adenosine deaminases [Haloquadratum walsbyi DSM 16790]
          Length = 154

 Score = 51.2 bits (121), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 27/95 (28%), Positives = 44/95 (46%)

Query: 6   VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           + M  AL+ A+ +A R + P G+V V ++ ++ R  N      D+  H E+      C+ 
Sbjct: 13  MHMQEALKLARESAARGDEPFGSVLVRDDTVVMRESNHEITESDIRRHPELHLAYRACQA 72

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
              +   E+ +Y T EPC MCA  +  A      Y
Sbjct: 73  YDSDERAEMVMYTTTEPCPMCAGGMVTAGFDSTVY 107


>gi|291279486|ref|YP_003496321.1| bifunctional riboflavin biosynthesis protein RibD [Deferribacter
           desulfuricans SSM1]
 gi|290754188|dbj|BAI80565.1| bifunctional riboflavin biosynthesis protein RibD [Deferribacter
           desulfuricans SSM1]
          Length = 384

 Score = 51.2 bits (121), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 42/131 (32%), Positives = 59/131 (45%), Gaps = 27/131 (20%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85
           VGA+ V + KII R  +         +HAEI A+         E L   DLYVTLEPC++
Sbjct: 28  VGAIIVKDGKIIGRGYHEEYG----KSHAEINAMNDAV-----EPLEGADLYVTLEPCSI 78

Query: 86  ------CAAAISLARIRRLYYGASNPK----GGGIENGTQFYTLATCHHSPEIYPGISEQ 135
                 C  AI   +I+R++ G  +P     G GI        +       E++ G  E+
Sbjct: 79  HGKTPPCVDAIIENKIKRVFIGVVDPNPKIAGQGI--------IKLIEAGVEVFVGFDEE 130

Query: 136 RSRQIIQDFFK 146
               II+DF K
Sbjct: 131 LCASIIEDFTK 141


>gi|67464318|pdb|1YSB|A Chain A, Yeast Cytosine Deaminase Triple Mutant
 gi|67464319|pdb|1YSB|B Chain B, Yeast Cytosine Deaminase Triple Mutant
          Length = 161

 Score = 50.8 bits (120), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 41/145 (28%), Positives = 65/145 (44%), Gaps = 15/145 (10%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNK---IISRAGNRNRELKDVTAHAEILAIRMGCR 64
           M  A EEA        +P+G   ++NNK   ++ R  N   +    T H EI  +   C 
Sbjct: 18  MDIAYEEALLGYKEGGVPIGG-CLINNKDGSVLGRGHNMRFQKGSATLHGEISTLE-NCG 75

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS-NPKGGGIENGTQFYTLATCH 123
            L  ++  +  LY TL PC MC  AI +  I R   G + N K      G ++  L T  
Sbjct: 76  RLEGKVYKDTTLYTTLSPCDMCTGAIIMYGIPRCVIGENVNFK----SKGEKY--LQTRG 129

Query: 124 HSPEIYPGISEQRSRQIIQDFFKER 148
           H   +   + ++R +++++ F  ER
Sbjct: 130 HEVVV---VDDERCKKLMKQFIDER 151


>gi|323347994|gb|EGA82253.1| Tad2p [Saccharomyces cerevisiae Lalvin QA23]
          Length = 244

 Score = 50.8 bits (120), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 41/153 (26%), Positives = 69/153 (45%), Gaps = 17/153 (11%)

Query: 8   MSCALEEAQNAALRNEIPVGAV--AVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M  A+  A+ A   +E PV  +       ++++   N   +     AHAE + I     +
Sbjct: 1   MRTAVRLARYALDHDETPVACIFEHTPTGQVMAYGMNDTNKSLTGVAHAEFMGIDQIKAM 60

Query: 66  LSQ----EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF-YTLA 120
           L      ++  ++ LYVT+EPC MCA+A+    I ++ +G  N + GG  NGT       
Sbjct: 61  LGSRGVVDVFKDITLYVTVEPCIMCASALKQLGIGKVVFGCGNERFGG--NGTVLSVNHD 118

Query: 121 TCHHSP--------EIYPGISEQRSRQIIQDFF 145
           TC   P        E  PGI  + +  +++ F+
Sbjct: 119 TCTLVPKNNSAAGYESIPGILRKEAIMLLRYFY 151


>gi|290771180|emb|CAY80744.2| Tad2p [Saccharomyces cerevisiae EC1118]
          Length = 250

 Score = 50.8 bits (120), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 36/129 (27%), Positives = 61/129 (47%), Gaps = 11/129 (8%)

Query: 8   MSCALEEAQNAALRNEIPVGAV--AVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M  A+  A+ A   +E PV  +       ++++   N   +     AHAE + I     +
Sbjct: 7   MRTAVRLARYALDHDETPVACIFEHTPTGQVMAYGMNDTNKSLTGVAHAEFMGIDQIKAM 66

Query: 66  LSQ----EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
           L      ++  ++ LYVT+EPC MCA+A+    I ++ +G  N + GG  NGT    L+ 
Sbjct: 67  LGSRGVVDVFKDITLYVTVEPCIMCASALKQLGIGKVVFGCGNERFGG--NGT---VLSV 121

Query: 122 CHHSPEIYP 130
            H +  + P
Sbjct: 122 NHDTCTLVP 130


>gi|126641361|ref|YP_001084345.1| CMP/dCMP deaminase zinc-binding [Acinetobacter baumannii ATCC
           17978]
          Length = 116

 Score = 50.8 bits (120), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 25/60 (41%), Positives = 35/60 (58%)

Query: 49  DVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGG 108
           D TAHAE+LAIR+  ++L    L    ++ +  PC MC AA+ LA I+ + Y  SN  G 
Sbjct: 5   DPTAHAELLAIRVASQVLGTANLEGCSVFASGHPCPMCMAAMRLAGIKTVNYAYSNEDGA 64


>gi|317494530|ref|ZP_07952943.1| cytidine and deoxycytidylate deaminase zinc-binding protein
           [Enterobacteriaceae bacterium 9_2_54FAA]
 gi|316917460|gb|EFV38806.1| cytidine and deoxycytidylate deaminase zinc-binding protein
           [Enterobacteriaceae bacterium 9_2_54FAA]
          Length = 152

 Score = 50.8 bits (120), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 32/107 (29%), Positives = 51/107 (47%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M   + ++  AL  A  +  +   P GAV V N ++++ A N      D TAHAE+  IR
Sbjct: 1   MSSHDEYLQRALALAAESVEQGGRPFGAVIVRNGEVVAEAVNTIHLNGDPTAHAELNGIR 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKG 107
                     L E  +Y + +PC MC +A+ L  ++ +Y+   N  G
Sbjct: 61  DVSTRHGSTALRECVVYASGQPCPMCLSAMYLTGVQAVYFANGNQDG 107


>gi|256271071|gb|EEU06172.1| Tad2p [Saccharomyces cerevisiae JAY291]
          Length = 250

 Score = 50.8 bits (120), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 36/129 (27%), Positives = 61/129 (47%), Gaps = 11/129 (8%)

Query: 8   MSCALEEAQNAALRNEIPVGAV--AVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M  A+  A+ A   +E PV  +       ++++   N   +     AHAE + I     +
Sbjct: 7   MRTAVRLARYALDHDETPVACIFEHTPTGQVMAYGMNDTNKSLTGVAHAEFMGIDQIKAM 66

Query: 66  LSQ----EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
           L      ++  ++ LYVT+EPC MCA+A+    I ++ +G  N + GG  NGT    L+ 
Sbjct: 67  LGSRGVVDVFKDITLYVTVEPCIMCASALKQLGIGKVVFGCGNERFGG--NGT---VLSV 121

Query: 122 CHHSPEIYP 130
            H +  + P
Sbjct: 122 NHDTCTLVP 130


>gi|307153182|ref|YP_003888566.1| CMP/dCMP deaminase zinc-binding protein [Cyanothece sp. PCC 7822]
 gi|306983410|gb|ADN15291.1| CMP/dCMP deaminase zinc-binding protein [Cyanothece sp. PCC 7822]
          Length = 165

 Score = 50.8 bits (120), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 39/138 (28%), Positives = 66/138 (47%), Gaps = 8/138 (5%)

Query: 15  AQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL---SQEIL 71
           A +A  RN++ V A+    ++II    N   + ++   HAEI+ +      L   SQE  
Sbjct: 21  ASDAISRNKVGVAALLACGDEIIVLDHNPFADTQNPLDHAEIVVLNKAGSYLTKCSQEQK 80

Query: 72  PEVDLYVTLEPCTMCAAAISLARIRRLYYGA----SNPKGGGIENGT-QFYTLATCHHSP 126
            ++ LY TLEPC +C  A S   IRR+ Y A    +N +G  I+  T +           
Sbjct: 81  SKLTLYSTLEPCLICLLAASFVGIRRIVYAALAEDANQQGQLIKGMTARTINPYLTKGEM 140

Query: 127 EIYPGISEQRSRQIIQDF 144
           E+ PG+  ++ + +++  
Sbjct: 141 ELIPGVKREQGKALLEQM 158


>gi|77458955|ref|YP_348461.1| cytidine/deoxycytidylate deaminase, zinc-binding region
           [Pseudomonas fluorescens Pf0-1]
 gi|77382958|gb|ABA74471.1| cytidine/deoxycytidylate deaminase family protein [Pseudomonas
           fluorescens Pf0-1]
          Length = 169

 Score = 50.8 bits (120), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 37/95 (38%), Positives = 48/95 (50%), Gaps = 4/95 (4%)

Query: 11  ALEEAQNAALRNEIPVGA-VAVLNNKIISRAGNRNRELK-DVTAHAEILAIRMGCRILSQ 68
           AL EA     R   P  A VA  N K+I  AGN +   + D T HAE++A     ++LS 
Sbjct: 25  ALSEASKQ--RGRHPFAALVADRNGKVIVEAGNNSMPPEGDPTQHAELVAAAAAAKLLSP 82

Query: 69  EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
           + L    LY + EPC MCA A+    I R+ Y  S
Sbjct: 83  QELELCTLYTSAEPCCMCAGAVYWTGIGRVVYALS 117


>gi|683699|emb|CAA88261.1| orf2 [Saccharomyces cerevisiae]
          Length = 213

 Score = 50.8 bits (120), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 31/93 (33%), Positives = 49/93 (52%), Gaps = 10/93 (10%)

Query: 42  NRNRELKDVTAHAEILAIRMGCRILSQ----EILPEVDLYVTLEPCTMCAAAISLARIRR 97
           + N+ L  V AHAE + I     +L      ++  ++ LYVT+EPC MCA+A+    I +
Sbjct: 7   DTNKSLTGV-AHAEFMGIDQIKAMLGSRGVVDVFKDITLYVTVEPCIMCASALKQLDIGK 65

Query: 98  LYYGASNPKGGGIENGTQFYTLATCHHSPEIYP 130
           + +G  N + GG  NGT    L+  H +  + P
Sbjct: 66  VVFGCGNERFGG--NGT---VLSVNHDTCTLVP 93


>gi|116669980|ref|YP_830913.1| CMP/dCMP deaminase, zinc-binding [Arthrobacter sp. FB24]
 gi|116610089|gb|ABK02813.1| CMP/dCMP deaminase, zinc-binding protein [Arthrobacter sp. FB24]
          Length = 161

 Score = 50.8 bits (120), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 29/76 (38%), Positives = 38/76 (50%)

Query: 25  PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84
           P GA+ V  +       NR     D TAHAE++AIR      +   L    LY + EPC 
Sbjct: 31  PFGALVVTADGTRHFGVNRVTRDNDPTAHAEVVAIRTAAAESANFDLSGAVLYASCEPCP 90

Query: 85  MCAAAISLARIRRLYY 100
           +C AA   ARI R+Y+
Sbjct: 91  LCLAAALWARIDRVYF 106


>gi|158429187|pdb|2O3K|A Chain A, Yeast Cytosine Deaminase D92e Triple Mutant Bound To
           Transition State Analogue Hpy
 gi|158429188|pdb|2O3K|B Chain B, Yeast Cytosine Deaminase D92e Triple Mutant Bound To
           Transition State Analogue Hpy
          Length = 161

 Score = 50.8 bits (120), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 41/145 (28%), Positives = 65/145 (44%), Gaps = 15/145 (10%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNK---IISRAGNRNRELKDVTAHAEILAIRMGCR 64
           M  A EEA        +P+G   ++NNK   ++ R  N   +    T H EI  +   C 
Sbjct: 18  MDIAYEEALLGYKEGGVPIGG-CLINNKDGSVLGRGHNMRFQKGSATLHGEISTLE-NCG 75

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS-NPKGGGIENGTQFYTLATCH 123
            L  ++  +  LY TL PC MC  AI +  I R   G + N K      G ++  L T  
Sbjct: 76  RLEGKVYKDTTLYTTLSPCEMCTGAIIMYGIPRCVIGENVNFK----SKGEKY--LQTRG 129

Query: 124 HSPEIYPGISEQRSRQIIQDFFKER 148
           H   +   + ++R +++++ F  ER
Sbjct: 130 HEVVV---VDDERCKKLMKQFIDER 151


>gi|222082119|ref|YP_002541484.1| hypothetical protein Arad_8671 [Agrobacterium radiobacter K84]
 gi|221726798|gb|ACM29887.1| conserved hypothetical protein [Agrobacterium radiobacter K84]
          Length = 158

 Score = 50.8 bits (120), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 31/99 (31%), Positives = 47/99 (47%), Gaps = 1/99 (1%)

Query: 6   VFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           VF+  + E A  A L    P GA+ V  +  ++    N     +D+T HAE + +    +
Sbjct: 9   VFLRRSFEVAARARLNGNHPFGAILVGPDGTVLMEQENAYNPTQDMTGHAERVLMTRASQ 68

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
             S   L +  +Y + EPC MCA A   A + R+ YG S
Sbjct: 69  QYSPGFLVQCAMYTSAEPCAMCAGAAYWAGVGRVVYGLS 107


>gi|330991695|ref|ZP_08315645.1| putative cytosine deaminase [Gluconacetobacter sp. SXCC-1]
 gi|329761163|gb|EGG77657.1| putative cytosine deaminase [Gluconacetobacter sp. SXCC-1]
          Length = 280

 Score = 50.4 bits (119), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 37/101 (36%), Positives = 49/101 (48%), Gaps = 4/101 (3%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGN-RNRELKDVTAHAE-ILAIRMGC 63
           F+  A   A+ A    + P G + V    K++   GN    E  D+TAHAE +LA R   
Sbjct: 126 FLRRAFAVAERARQGGDHPFGCILVDATGKVVLEQGNGYTAEGGDMTAHAERLLATRASK 185

Query: 64  RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASN 104
           R    E L    +Y + EPC MCA A+  A I R+ YG S 
Sbjct: 186 RFPPAE-LAGCTMYTSAEPCAMCAGAVYWAGIGRVVYGQSE 225


>gi|149391445|gb|ABR25740.1| tRNA-specific adenosine deaminase [Oryza sativa Indica Group]
          Length = 106

 Score = 50.4 bits (119), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 26/63 (41%), Positives = 35/63 (55%)

Query: 69  EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEI 128
           E     DLYVT EPC MCA A+S+  IR +Y+G +N K GG  +    +  ++   S E 
Sbjct: 2   EKFARCDLYVTCEPCIMCAMALSILGIREVYFGCANDKFGGCGSIMSLHQSSSAELSGEE 61

Query: 129 YPG 131
            PG
Sbjct: 62  IPG 64


>gi|291084824|ref|ZP_06542690.2| tRNA-specific adenosine deaminase [Salmonella enterica subsp.
          enterica serovar Typhi str. AG3]
          Length = 76

 Score = 50.4 bits (119), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 27/61 (44%), Positives = 36/61 (59%)

Query: 7  FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
          +M  AL  A+ A    E+PVGAV V N+++I    NR     D TAHAEI+A+R G  +L
Sbjct: 11 WMRHALTLAKRAWDEREVPVGAVLVHNHRVIGEGWNRPIGRHDPTAHAEIMALRQGGLVL 70

Query: 67 S 67
           
Sbjct: 71 Q 71


>gi|255994555|ref|ZP_05427690.1| riboflavin biosynthesis protein RibD [Eubacterium saphenum ATCC
           49989]
 gi|255993268|gb|EEU03357.1| riboflavin biosynthesis protein RibD [Eubacterium saphenum ATCC
           49989]
          Length = 368

 Score = 50.4 bits (119), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 53/160 (33%), Positives = 77/160 (48%), Gaps = 30/160 (18%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57
           +K    +MS ALE A+   L    P   VGAV V N +II +  ++    K  +AHAE+ 
Sbjct: 6   IKDKEKYMSMALELAEKG-LGTTSPNPMVGAVIVKNGEIIGKGFHK----KAGSAHAEVE 60

Query: 58  AIRMGCRILSQEILPE-VDLYVTLEPCT------MCAAAISLARIRRLYYGASNP----K 106
           A++      S++   E  D+YVTLEPC+       C+  +   +I R++ G  +P     
Sbjct: 61  AVQ---DAHSKDYDIEGADMYVTLEPCSHKGRTPACSDLLIKEKIGRVFIGMRDPNPLVN 117

Query: 107 GGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
           GGGIE       L  C        GI E+R RQ+ + F K
Sbjct: 118 GGGIEKLEG--ALIKCE------VGILEERCRQLNKVFLK 149


>gi|322704161|gb|EFY95759.1| cytidine and deoxycytidylate deaminase [Metarhizium anisopliae
           ARSEF 23]
          Length = 469

 Score = 50.4 bits (119), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 25/51 (49%), Positives = 35/51 (68%), Gaps = 1/51 (1%)

Query: 59  IRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109
           I  G R+ S+EI+ E  LYVT+EPC MCA+ +    I+++Y+GA N K GG
Sbjct: 266 IHAGDRV-SREIIRECILYVTVEPCVMCASLLRQLGIKKVYFGAVNDKFGG 315



 Score = 38.9 bits (89), Expect = 0.22,   Method: Composition-based stats.
 Identities = 22/53 (41%), Positives = 30/53 (56%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
           F+  AL+ A+ A   NE PVG V V N  II++  N     ++ T HAE +AI
Sbjct: 151 FIEEALDMARLALRTNETPVGCVLVHNGTIIAKGMNATNVTRNGTRHAEFMAI 203


>gi|293115762|ref|ZP_05792940.2| guanine deaminase [Butyrivibrio crossotus DSM 2876]
 gi|292808437|gb|EFF67642.1| guanine deaminase [Butyrivibrio crossotus DSM 2876]
          Length = 194

 Score = 50.4 bits (119), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 28/104 (26%), Positives = 47/104 (45%), Gaps = 1/104 (0%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNN-KIISRAGNRNRELKDVTAHAEILAI 59
            K    ++  A+E ++ +      P G V V  + +II   GN     K  T HAE + +
Sbjct: 36  WKSDEYYLEKAIEVSRKSRAGGNTPFGCVLVDGDGEIILEQGNVEITEKRCTGHAETVIM 95

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
               ++  ++ L    LY T EPC MCA A+    + ++ Y  +
Sbjct: 96  ERASKLYDKKFLWNCTLYTTCEPCPMCAGAVYWGNVGKVVYAMT 139


>gi|322797886|gb|EFZ19783.1| hypothetical protein SINV_80092 [Solenopsis invicta]
          Length = 423

 Score = 50.4 bits (119), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 20/68 (29%), Positives = 41/68 (60%)

Query: 77  YVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQR 136
           ++ +EPC +CA A+  +R+ R++YG +N   G + + T  +T+   +H   ++ GI E+ 
Sbjct: 349 FLLVEPCPLCAMALLHSRVARIFYGTANESAGVLGSRTVLHTVPGLNHRYRVWSGILERE 408

Query: 137 SRQIIQDF 144
            RQ +++ 
Sbjct: 409 CRQALEEI 416


>gi|146157359|gb|ABQ08114.1| hypothetical protein [Tropheryma whipplei]
          Length = 60

 Score = 50.4 bits (119), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 23/52 (44%), Positives = 32/52 (61%)

Query: 59  IRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI 110
           IR   ++L    L  + L+VT+EPCTMCA AI  +RI R+ +G  N K G +
Sbjct: 1   IRKASQMLKDWRLSGLTLFVTMEPCTMCAGAIVTSRISRVVFGVFNNKTGSV 52


>gi|66815967|ref|XP_642000.1| cytidine deaminase-like protein [Dictyostelium discoideum AX4]
 gi|60470041|gb|EAL68022.1| cytidine deaminase-like protein [Dictyostelium discoideum AX4]
          Length = 519

 Score = 50.4 bits (119), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 25/83 (30%), Positives = 47/83 (56%), Gaps = 6/83 (7%)

Query: 63  CRILS-----QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFY 117
           C ILS     Q +     L++T EPC MC+ A+  +R++R+ YG+S+ + GG+ +  + +
Sbjct: 431 CNILSFVNLGQYLATNFHLFITKEPCIMCSMALVHSRVKRVVYGSSS-RDGGLGSYLKIH 489

Query: 118 TLATCHHSPEIYPGISEQRSRQI 140
           T  + +H  E+Y    E   +++
Sbjct: 490 TEKSLNHRFEVYKDFMEDECKKL 512


>gi|255658129|ref|ZP_05403538.1| riboflavin biosynthesis protein RibD [Mitsuokella multacida DSM
           20544]
 gi|260849436|gb|EEX69443.1| riboflavin biosynthesis protein RibD [Mitsuokella multacida DSM
           20544]
          Length = 363

 Score = 50.4 bits (119), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 50/149 (33%), Positives = 69/149 (46%), Gaps = 23/149 (15%)

Query: 7   FMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
           FM  ALE A+NA  R   P   VGAV V   +I++   +R    K  T HAEI A+RM  
Sbjct: 6   FMREALELARNAEGRTS-PNPMVGAVIVQGGRIVAAGWHR----KAGTPHAEIHALRM-- 58

Query: 64  RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFY 117
              + E+     LYVTLEPC+       CA A+  A I+R      +P       G +  
Sbjct: 59  ---AGELAKGATLYVTLEPCSHYGRTGPCAKAVVEAGIKRCVIAMKDPNPLVAGRGIKIL 115

Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDFFK 146
             A      E   G+ E+ +R++ + F K
Sbjct: 116 EDAGV----ETVCGVLEEEARRLNEVFLK 140


>gi|310793981|gb|EFQ29442.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Glomerella graminicola M1.001]
          Length = 398

 Score = 50.4 bits (119), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 43/162 (26%), Positives = 59/162 (36%), Gaps = 57/162 (35%)

Query: 6   VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI------ 59
            FM  AL+ A+ A   NE PVG V V N  +I+R  N     ++ T HAE +A+      
Sbjct: 83  AFMGQALDMARLALRTNETPVGCVLVYNGSVIARGMNATNVTRNGTRHAEFMAVSALLSY 142

Query: 60  -------------------RMGCRILSQE--ILPEVDLY--------------------- 77
                              R    +   E  + P  D Y                     
Sbjct: 143 RSRNNEEAADTQLRQQASERSKADVTDDESDLFPMDDDYVKEGHLYPYGQKLHRAMRVER 202

Query: 78  ---------VTLEPCTMCAAAISLARIRRLYYGASNPKGGGI 110
                    VT+EPC MCA  +    I+++Y+GA N K GG 
Sbjct: 203 SIVRECTLYVTVEPCVMCAGLLRQLGIKKVYFGAVNDKFGGT 244


>gi|323337097|gb|EGA78353.1| Tad2p [Saccharomyces cerevisiae Vin13]
          Length = 213

 Score = 50.4 bits (119), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 31/93 (33%), Positives = 49/93 (52%), Gaps = 10/93 (10%)

Query: 42  NRNRELKDVTAHAEILAIRMGCRILSQ----EILPEVDLYVTLEPCTMCAAAISLARIRR 97
           + N+ L  V AHAE + I     +L      ++  ++ LYVT+EPC MCA+A+    I +
Sbjct: 7   DTNKSLTGV-AHAEFMGIDQIKAMLGSRGVVDVFKDITLYVTVEPCIMCASALKQLGIGK 65

Query: 98  LYYGASNPKGGGIENGTQFYTLATCHHSPEIYP 130
           + +G  N + GG  NGT    L+  H +  + P
Sbjct: 66  VVFGCGNERFGG--NGT---VLSVNHDTCTLVP 93


>gi|296166409|ref|ZP_06848841.1| possible guanine deaminase [Mycobacterium parascrofulaceum ATCC
          BAA-614]
 gi|295898170|gb|EFG77744.1| possible guanine deaminase [Mycobacterium parascrofulaceum ATCC
          BAA-614]
          Length = 166

 Score = 50.1 bits (118), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 24/66 (36%), Positives = 36/66 (54%)

Query: 25 PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84
          P   V V + ++++ + N   +  D TAHAEILAIR  C  L  E L +  +Y+   PC 
Sbjct: 22 PFATVIVNDGEVLAESANMVAQANDPTAHAEILAIREACMKLGTEHLVDSTVYLMAHPCP 81

Query: 85 MCAAAI 90
          MC  ++
Sbjct: 82 MCLGSL 87


>gi|212540050|ref|XP_002150180.1| cytosine deaminase, putative [Penicillium marneffei ATCC 18224]
 gi|210067479|gb|EEA21571.1| cytosine deaminase, putative [Penicillium marneffei ATCC 18224]
          Length = 148

 Score = 50.1 bits (118), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 32/100 (32%), Positives = 46/100 (46%), Gaps = 2/100 (2%)

Query: 11  ALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQE 69
           A+EEA+       +P+GA  V  + KI+ R  N   +    T H EI A+    R L   
Sbjct: 10  AVEEARQGQAEGGVPIGACLVSKDGKILGRGHNMRFQKGSATLHGEISALENSGR-LPAS 68

Query: 70  ILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109
                 +Y TL PC MC  A  L +++R+  G +    GG
Sbjct: 69  AYEGATMYTTLSPCDMCTGACILYKVKRVVVGENKTFLGG 108


>gi|145229091|ref|XP_001388854.1| cytosine deaminase [Aspergillus niger CBS 513.88]
 gi|134054953|emb|CAK36962.1| unnamed protein product [Aspergillus niger]
          Length = 148

 Score = 50.1 bits (118), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/100 (32%), Positives = 47/100 (47%), Gaps = 2/100 (2%)

Query: 11  ALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQE 69
           A+EEA+  A    +P+GA  V  + KI+ R  N   +      HAE+ A+    R L   
Sbjct: 10  AVEEAKQGAAEGGVPIGACLVSKDGKILGRGHNMRVQKGSPVLHAEMSALENSGR-LPAS 68

Query: 70  ILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109
                 +Y TL PC MC  A  L +++R+  G +    GG
Sbjct: 69  AYEGATMYTTLSPCDMCTGACILYKVKRVVVGENKSFMGG 108


>gi|269838046|ref|YP_003320274.1| CMP/dCMP deaminase zinc-binding protein [Sphaerobacter thermophilus
           DSM 20745]
 gi|269787309|gb|ACZ39452.1| CMP/dCMP deaminase zinc-binding protein [Sphaerobacter thermophilus
           DSM 20745]
          Length = 148

 Score = 50.1 bits (118), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 27/76 (35%), Positives = 38/76 (50%)

Query: 27  GAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMC 86
           GAV V + ++I+   N      D TAHAE +A+R     L    L    LY T +PC MC
Sbjct: 28  GAVVVRDGQVIATGRNEATTTSDPTAHAETIAVRNAGMALGTLDLSGCTLYATFQPCPMC 87

Query: 87  AAAISLARIRRLYYGA 102
             +I ++ I  +  GA
Sbjct: 88  CGSILVSGISTVVIGA 103


>gi|291287235|ref|YP_003504051.1| riboflavin biosynthesis protein RibD [Denitrovibrio acetiphilus DSM
           12809]
 gi|290884395|gb|ADD68095.1| riboflavin biosynthesis protein RibD [Denitrovibrio acetiphilus DSM
           12809]
          Length = 387

 Score = 50.1 bits (118), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 39/127 (30%), Positives = 60/127 (47%), Gaps = 19/127 (14%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85
           VGA+    ++I+SR  +    +     HAE+ AI   C + ++ +    DLYVTLEPC+ 
Sbjct: 32  VGAIVANQSEILSRGWH----MAYGGPHAEVNAID-SCPVSTEGL----DLYVTLEPCSH 82

Query: 86  ------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139
                 C   I  + IRR++ G  +P       G ++      +H  E+Y G  E     
Sbjct: 83  SGKTPPCVEKIVKSGIRRVFIGVVDPNPLVAGKGVEYLK----NHGVEVYVGYMEDLCAS 138

Query: 140 IIQDFFK 146
           II+DF K
Sbjct: 139 IIEDFVK 145


>gi|134107133|ref|XP_777879.1| hypothetical protein CNBA5760 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|50260577|gb|EAL23232.1| hypothetical protein CNBA5760 [Cryptococcus neoformans var.
           neoformans B-3501A]
          Length = 165

 Score = 50.1 bits (118), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/94 (34%), Positives = 49/94 (52%), Gaps = 3/94 (3%)

Query: 7   FMSCALEEAQNAALRNEIPVGA--VAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           FMS A E+A  +     IP+GA  V +  ++IISR  N   +L     H E+  +    R
Sbjct: 17  FMSVAHEQALKSLSEGGIPIGAALVHLPTSRIISRGHNNRVQLSSNVRHGEMDCLENLGR 76

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98
           +  + +L E  ++ TL PC MC+A   L +IR +
Sbjct: 77  V-PEGLLSECAMFTTLSPCIMCSATCILYKIRTV 109


>gi|306821102|ref|ZP_07454718.1| tRNA(Ile)-lysidine synthase (tRNA(Ile)-lysidinesynthetase)
           [Eubacterium yurii subsp. margaretiae ATCC 43715]
 gi|304550795|gb|EFM38770.1| tRNA(Ile)-lysidine synthase (tRNA(Ile)-lysidinesynthetase)
           [Eubacterium yurii subsp. margaretiae ATCC 43715]
          Length = 108

 Score = 50.1 bits (118), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 31/106 (29%), Positives = 47/106 (44%), Gaps = 10/106 (9%)

Query: 51  TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI 110
           T HAE   IR  C       L E  LY + EPC MC+ A+   ++ RL YGASN +   +
Sbjct: 4   TVHAEAGLIREFCAKTGISNLQEYTLYSSCEPCFMCSGAMVWVKLGRLVYGASNME---L 60

Query: 111 EN-------GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
           EN                    PE+  G+    S +++++ F + +
Sbjct: 61  ENILGNEGCNCSKLVFDNSFWKPEVTEGVLRDESLEVLKEHFSKHK 106


>gi|302679520|ref|XP_003029442.1| hypothetical protein SCHCODRAFT_78305 [Schizophyllum commune H4-8]
 gi|300103132|gb|EFI94539.1| hypothetical protein SCHCODRAFT_78305 [Schizophyllum commune H4-8]
          Length = 158

 Score = 50.1 bits (118), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 41/145 (28%), Positives = 63/145 (43%), Gaps = 14/145 (9%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNK----IISRAGNRNRELKDVTAHAEILAIRMGC 63
           M  A EEA   A    IP+G+  V ++     +I+   N   +    T H EI  +    
Sbjct: 13  MQRAFEEADAGAKEGGIPIGSALVQHDDSGDHLIASGRNLRIQKGSATLHGEICCLETAG 72

Query: 64  RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123
           R L   +  +  +Y TL PC MC  AI L +I R+  G +    GG E   Q        
Sbjct: 73  R-LKAGVYRKCTIYTTLSPCIMCTGAILLYKIPRVVIGENANFVGGEELLKQ-------- 123

Query: 124 HSPEIYPGISEQRSRQIIQDFFKER 148
           H  E+   + + R ++++  F KE+
Sbjct: 124 HGVEVVV-LDDNRCKELMAKFIKEK 147


>gi|58259071|ref|XP_566948.1| cytosine deaminase [Cryptococcus neoformans var. neoformans JEC21]
 gi|57223085|gb|AAW41129.1| cytosine deaminase, putative [Cryptococcus neoformans var.
           neoformans JEC21]
          Length = 165

 Score = 50.1 bits (118), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/94 (34%), Positives = 49/94 (52%), Gaps = 3/94 (3%)

Query: 7   FMSCALEEAQNAALRNEIPVGA--VAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           FMS A E+A  +     IP+GA  V +  ++IISR  N   +L     H E+  +    R
Sbjct: 17  FMSVAHEQALKSLSEGGIPIGAALVHLPTSRIISRGHNNRVQLSSNVRHGEMDCLENLGR 76

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98
           +  + +L E  ++ TL PC MC+A   L +IR +
Sbjct: 77  V-PEGLLSECAMFTTLSPCIMCSATCILYKIRTV 109


>gi|158312920|ref|YP_001505428.1| CMP/dCMP deaminase zinc-binding [Frankia sp. EAN1pec]
 gi|158108325|gb|ABW10522.1| CMP/dCMP deaminase zinc-binding [Frankia sp. EAN1pec]
          Length = 188

 Score = 50.1 bits (118), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 35/108 (32%), Positives = 47/108 (43%), Gaps = 32/108 (29%)

Query: 25  PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQE---ILPEVDLYVTLE 81
           P GAV V + +I++R  NR     D TAHAE+ +IR   ++L+ E   I PE     TLE
Sbjct: 25  PFGAVIVKDGEIVARGQNRVLLTGDPTAHAEVESIRKAIQVLNPEGPTIAPEEQDLATLE 84

Query: 82  -----------------------------PCTMCAAAISLARIRRLYY 100
                                        PC MC +AI  +RI  +YY
Sbjct: 85  LVPRPEGSPDRVPKRAKMLMGYSIYTAGIPCPMCMSAIYWSRISDVYY 132


>gi|119961232|ref|YP_946898.1| cytosine deaminase [Arthrobacter aurescens TC1]
 gi|119948091|gb|ABM07002.1| Cytosine deaminase [Arthrobacter aurescens TC1]
          Length = 150

 Score = 50.1 bits (118), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/91 (32%), Positives = 41/91 (45%), Gaps = 3/91 (3%)

Query: 11  ALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEI 70
           A + AQ +     IP+GA      K+I+   N   +  D  AH E+ A+R   R  S   
Sbjct: 15  AYQAAQKSLSEGGIPIGAALARGGKVIASGHNERVQHGDPIAHGEMSALRAAGRQTSYR- 73

Query: 71  LPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
             +  LY TL PC MC   I   +I R+  G
Sbjct: 74  --DTTLYTTLAPCAMCTGTIIQFKIPRVVVG 102


>gi|238006290|gb|ACR34180.1| unknown [Zea mays]
          Length = 130

 Score = 49.7 bits (117), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 21/35 (60%), Positives = 26/35 (74%)

Query: 75  DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109
           DLYVT EPC MCA A+S+  IR +Y+G +N K GG
Sbjct: 29  DLYVTCEPCIMCATALSIIGIREVYFGCANDKFGG 63


>gi|322696336|gb|EFY88130.1| CMP/dCMP deaminase, zinc-binding protein [Metarhizium acridum CQMa
           102]
          Length = 474

 Score = 49.7 bits (117), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 22/44 (50%), Positives = 32/44 (72%)

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109
           +S+EI+ E  LYVT+EPC MCA+ +    I+++Y+GA N K GG
Sbjct: 277 VSREIIRECILYVTVEPCVMCASLLRQLGIKKVYFGAVNDKFGG 320



 Score = 38.1 bits (87), Expect = 0.42,   Method: Composition-based stats.
 Identities = 21/53 (39%), Positives = 30/53 (56%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
           F+  AL+ A+ A   NE PVG V V N  +I++  N     ++ T HAE +AI
Sbjct: 156 FIEEALDMARLALRTNETPVGCVLVHNGTVIAKGMNATNVTRNGTRHAEFMAI 208


>gi|297838959|ref|XP_002887361.1| hydrolase/ zinc ion binding protein [Arabidopsis lyrata subsp.
           lyrata]
 gi|297333202|gb|EFH63620.1| hydrolase/ zinc ion binding protein [Arabidopsis lyrata subsp.
           lyrata]
          Length = 400

 Score = 49.7 bits (117), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 18/36 (50%), Positives = 26/36 (72%)

Query: 75  DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI 110
           D+++ LEPCTMCA A+   RI+R++Y   NP  GG+
Sbjct: 331 DIFLLLEPCTMCAMALVHQRIKRIFYAFPNPTAGGL 366


>gi|194705936|gb|ACF87052.1| unknown [Zea mays]
          Length = 138

 Score = 49.7 bits (117), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 21/35 (60%), Positives = 26/35 (74%)

Query: 75  DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109
           DLYVT EPC MCA A+S+  IR +Y+G +N K GG
Sbjct: 37  DLYVTCEPCIMCATALSIIGIREVYFGCANDKFGG 71


>gi|169627158|ref|YP_001700807.1| cytidine/deoxycytidylate deaminase [Mycobacterium abscessus ATCC
          19977]
 gi|169239125|emb|CAM60153.1| Probable cytidine/deoxycytidylate deaminase [Mycobacterium
          abscessus]
          Length = 166

 Score = 49.7 bits (117), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 24/66 (36%), Positives = 35/66 (53%)

Query: 25 PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84
          P   + V +  +++ + NR  +  D TAHAEILAIR  C  L  E L    +++   PC 
Sbjct: 21 PFATIIVKDGAVLAESPNRVAQTNDPTAHAEILAIREACTRLGTEHLAGSTIFILALPCP 80

Query: 85 MCAAAI 90
          MC  A+
Sbjct: 81 MCLGAL 86


>gi|324520795|gb|ADY47713.1| tRNA-specific adenosine deaminase-like protein 3 [Ascaris suum]
          Length = 297

 Score = 49.7 bits (117), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/111 (30%), Positives = 56/111 (50%), Gaps = 12/111 (10%)

Query: 27  GAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGC---RILSQEILPEV----DLYV 78
           G V V L+  I + +G R R L     HA + A+   C   RI   +I+  +    D+Y+
Sbjct: 185 GCVIVDLDGNIAAESGVRPRPL----GHAVMSAVEDLCESHRIQGSDIVQYLGTGFDVYL 240

Query: 79  TLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIY 129
           T EPC+MCA A+   R+ R+++G  N  GG +E+  +       +H   ++
Sbjct: 241 THEPCSMCAMALVHFRVGRVFFGKRNANGGALESSWRIQEEKRINHHYRVF 291


>gi|312623117|ref|YP_004024730.1| riboflavin biosynthesis protein ribd [Caldicellulosiruptor
           kronotskyensis 2002]
 gi|312203584|gb|ADQ46911.1| riboflavin biosynthesis protein RibD [Caldicellulosiruptor
           kronotskyensis 2002]
          Length = 371

 Score = 49.3 bits (116), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 46/149 (30%), Positives = 70/149 (46%), Gaps = 20/149 (13%)

Query: 7   FMSCALEEAQNAA---LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
           +M+ ALE A+ A+   L N   VG V V N  +I +  ++    K    HAE+LAI    
Sbjct: 9   YMNMALELAKEASPLVLPNP-RVGCVIVKNGTVIGKGYHQKYGEK----HAEVLAIEDAI 63

Query: 64  RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFY 117
           +  +  +L    +YVTLEPC        C  AI  + I+R+     +P    + NG    
Sbjct: 64  K--NGYLLKNSTMYVTLEPCCHYGKQLPCTEAIIKSGIKRVVIATKDP--NPLVNGKGIQ 119

Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDFFK 146
            L    H  E+  G+ ++ +  I +DFFK
Sbjct: 120 ILK--QHGTEVIEGVLQKEAESINKDFFK 146


>gi|156368641|ref|XP_001627801.1| predicted protein [Nematostella vectensis]
 gi|156214721|gb|EDO35701.1| predicted protein [Nematostella vectensis]
          Length = 291

 Score = 49.3 bits (116), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 21/55 (38%), Positives = 33/55 (60%)

Query: 75  DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIY 129
           DLYVT EPC MCA A+  +RIRR++Y   +   G + +  + +T    +H  E++
Sbjct: 231 DLYVTQEPCVMCAMALVHSRIRRVFYSCGDSIRGALGSKYKLHTQKALNHHFEVF 285


>gi|302384487|ref|YP_003820309.1| CMP/dCMP deaminase zinc-binding protein [Clostridium
           saccharolyticum WM1]
 gi|302195115|gb|ADL02686.1| CMP/dCMP deaminase zinc-binding protein [Clostridium
           saccharolyticum WM1]
          Length = 161

 Score = 49.3 bits (116), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 23/53 (43%), Positives = 29/53 (54%)

Query: 51  TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
           T HAE        ++ S++ L +  LY T EPC MCA AI  A I R+ YG S
Sbjct: 54  TGHAETQVAERASQLYSKDFLSDCTLYTTAEPCAMCAGAIYWAGIGRVVYGMS 106


>gi|332025750|gb|EGI65908.1| tRNA-specific adenosine deaminase-like protein 3 [Acromyrmex
           echinatior]
          Length = 423

 Score = 49.3 bits (116), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 21/69 (30%), Positives = 40/69 (57%)

Query: 80  LEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139
           +EPC +CA A+  +R+ R++YG +N   G + + T  +T+   +H   ++ GI E+  RQ
Sbjct: 353 IEPCPLCAMALLHSRVARIFYGTANQNVGVLGSKTILHTVPGLNHRYRVWSGILERECRQ 412

Query: 140 IIQDFFKER 148
            +++    R
Sbjct: 413 TVEEINARR 421


>gi|226304955|ref|YP_002764913.1| deaminase [Rhodococcus erythropolis PR4]
 gi|226184070|dbj|BAH32174.1| putative deaminase [Rhodococcus erythropolis PR4]
          Length = 121

 Score = 49.3 bits (116), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/106 (32%), Positives = 54/106 (50%), Gaps = 7/106 (6%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           +S AL+ A+      E+P+GAV   +++++ RA  + R L     HA++ AI      L 
Sbjct: 8   LSLALDVAREGMELGEMPIGAVVFDDDRVLGRAYTQERALGRRVVHADLQAILQADEALG 67

Query: 68  -QEILPEVDLYVTLEPCTMC-AAAISLARIRRLYYG----ASNPKG 107
                 E+ L V LEPC MC  AAI+L  + R+++      + P G
Sbjct: 68  FTRASGELTLAVNLEPCLMCMGAAITLG-VSRVWFAEYATGTGPAG 112


>gi|170581814|ref|XP_001895850.1| Cytidine and deoxycytidylate deaminase zinc-binding region family
           protein [Brugia malayi]
 gi|158597081|gb|EDP35311.1| Cytidine and deoxycytidylate deaminase zinc-binding region family
           protein [Brugia malayi]
          Length = 292

 Score = 49.3 bits (116), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 33/94 (35%), Positives = 50/94 (53%), Gaps = 12/94 (12%)

Query: 27  GAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGC---RILSQEILPEV----DLYV 78
           G V V L  ++++++GNRN  L     HA + A+   C   R    +IL  +    D+Y+
Sbjct: 180 GCVIVDLKGEVVAKSGNRNIPL----GHAVMAAVSDLCERHRTKQSDILQYLGTGFDVYL 235

Query: 79  TLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN 112
           T EPC MCA A+   R+ R++YG   P  G  E+
Sbjct: 236 TDEPCAMCAMALVHFRVGRVFYGKRAPLDGVYES 269


>gi|118350811|ref|XP_001008684.1| Cytidine and deoxycytidylate deaminase zinc-binding region family
           protein [Tetrahymena thermophila]
 gi|89290451|gb|EAR88439.1| Cytidine and deoxycytidylate deaminase zinc-binding region family
           protein [Tetrahymena thermophila SB210]
          Length = 337

 Score = 49.3 bits (116), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 19/62 (30%), Positives = 35/62 (56%), Gaps = 3/62 (4%)

Query: 74  VDLYVTLEPCTMCAAAISLARIRRLYYGASNPKG---GGIENGTQFYTLATCHHSPEIYP 130
           +D+++  EPC MC+ A+  +R+RR+YY   NPK    GG+        + + +HS  ++ 
Sbjct: 256 LDIFIVQEPCIMCSMALIHSRVRRVYYSLKNPKQEQFGGLNEDLMINHMDSLNHSFLVFQ 315

Query: 131 GI 132
            +
Sbjct: 316 NV 317


>gi|307189599|gb|EFN73960.1| tRNA-specific adenosine deaminase-like protein 3 [Camponotus
           floridanus]
          Length = 418

 Score = 49.3 bits (116), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 20/69 (28%), Positives = 41/69 (59%)

Query: 76  LYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQ 135
           +++ +EPC MCA A+  +R+  ++YGA N   G + +    +T+   +H   ++ GI E+
Sbjct: 343 VFLLMEPCPMCAMALLHSRVAMIFYGAVNQNLGVLGSRAVLHTVPGLNHRYRVWSGILER 402

Query: 136 RSRQIIQDF 144
             RQ++++ 
Sbjct: 403 ECRQMVEEI 411


>gi|294632878|ref|ZP_06711437.1| cytosine deaminase [Streptomyces sp. e14]
 gi|292830659|gb|EFF89009.1| cytosine deaminase [Streptomyces sp. e14]
          Length = 160

 Score = 48.9 bits (115), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/109 (29%), Positives = 50/109 (45%), Gaps = 8/109 (7%)

Query: 15  AQNAALRNEIPVGAV-AVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPE 73
           A  A  + + P G++ A  +  +++ A N  R   D+TAH E+   R   R L      +
Sbjct: 32  AARAVEQGDAPYGSLLAGPDGAVLAEAHNTVRRDDDITAHPELKLARWAARELDPRTAAD 91

Query: 74  VDLYVTLEPCTMCAAAISLARIRRLYYGAS-------NPKGGGIENGTQ 115
           V +Y + +PC MCA  I  + I R+ Y  +       NP+ G     TQ
Sbjct: 92  VTMYTSCQPCGMCAGGILRSGIGRVVYALATDQLIELNPESGQWPTVTQ 140


>gi|325971563|ref|YP_004247754.1| CMP/dCMP deaminase zinc-binding protein [Spirochaeta sp. Buddy]
 gi|324026801|gb|ADY13560.1| CMP/dCMP deaminase zinc-binding protein [Spirochaeta sp. Buddy]
          Length = 169

 Score = 48.9 bits (115), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/93 (32%), Positives = 41/93 (44%), Gaps = 2/93 (2%)

Query: 15  AQNAALRNEIPVGAV-AVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPE 73
           A  A  +   P GA+ A  +  I+   GN   E      HAE L +    R+ + + L  
Sbjct: 24  AHTAKEQGNHPFGALLADKDGNILLEQGNSYEE-GGSAMHAETLLLFKASRLYAPDFLAT 82

Query: 74  VDLYVTLEPCTMCAAAISLARIRRLYYGASNPK 106
             LY   EPC MC  A+    +RRL YG +  K
Sbjct: 83  CSLYTNAEPCVMCTGAMYWTNVRRLVYGITEAK 115


>gi|195952880|ref|YP_002121170.1| riboflavin biosynthesis protein RibD [Hydrogenobaculum sp. Y04AAS1]
 gi|195932492|gb|ACG57192.1| riboflavin biosynthesis protein RibD [Hydrogenobaculum sp. Y04AAS1]
          Length = 357

 Score = 48.9 bits (115), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 42/153 (27%), Positives = 72/153 (47%), Gaps = 21/153 (13%)

Query: 1   MKKGNVFMSCALEEAQN--AALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           + K   +M  ALEEA            VG + V ++KI+S   ++    K  T HAEI+A
Sbjct: 2   INKDKYYMKLALEEAYKYKGQTHPNPAVGVLIVKDDKILSIGAHK----KAGTDHAEIVA 57

Query: 59  IRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIEN 112
           ++      +QE +    +YVTLEPC+       C  AI  + I+++  G+ +P       
Sbjct: 58  LKN-----AQEDVKGATMYVTLEPCSFHGKTPPCCPAIISSGIKKVVIGSVDPNPKVSGK 112

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
           G ++   A      E+  G+ ++   ++ +DFF
Sbjct: 113 GIEWLKSAGI----EVEVGVLKEECDKLNEDFF 141


>gi|311243850|ref|XP_003121217.1| PREDICTED: tRNA-specific adenosine deaminase 2 isoform 2 [Sus
           scrofa]
          Length = 152

 Score = 48.9 bits (115), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/111 (28%), Positives = 55/111 (49%), Gaps = 14/111 (12%)

Query: 48  KDVTAHAEILAIRMGCRILS---------QEILPEVDLYVTLEPCTMCAAAISLARIRRL 98
           ++ T HAE++AI    ++L           E+     LYVT+EPC MCAAA+ L +I  +
Sbjct: 27  ENATRHAEMVAID---QVLDWCHRGGKSPSEVFERTVLYVTVEPCIMCAAALRLMKIPLV 83

Query: 99  YYGASNPKGGGIENGTQFYT--LATCHHSPEIYPGISEQRSRQIIQDFFKE 147
            YG  N + GG  +     +  L       +  PG   + + ++++ F+K+
Sbjct: 84  VYGCQNERFGGCGSVLDIASADLPNTGRPFQCIPGYRAEEAVEMLKTFYKQ 134


>gi|124009330|ref|ZP_01694009.1| cytosine deaminase [Microscilla marina ATCC 23134]
 gi|123985107|gb|EAY25051.1| cytosine deaminase [Microscilla marina ATCC 23134]
          Length = 144

 Score = 48.9 bits (115), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 29/97 (29%), Positives = 50/97 (51%), Gaps = 3/97 (3%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  A+ +A+ +     IP+G+V + N +II++  N+  +  +   H E+  +    RI 
Sbjct: 4   FMEAAIAQAEKSYNEGGIPIGSVLMRNGEIIAQGHNKRVQEANPILHGEMDCLLNAGRIG 63

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
           S +   +  +Y TL PC MCA  I    I+++  G S
Sbjct: 64  SYK---DTVIYSTLMPCYMCAGTIVQFNIKKVVVGES 97


>gi|113868680|ref|YP_727169.1| cytosine/adenosine deaminase [Ralstonia eutropha H16]
 gi|113527456|emb|CAJ93801.1| Cytosine/adenosine deaminase [Ralstonia eutropha H16]
          Length = 169

 Score = 48.9 bits (115), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 40/100 (40%), Positives = 49/100 (49%), Gaps = 4/100 (4%)

Query: 9   SCALEEAQNAALRNEIPVGA-VAVLNNKIISRAGNRNRELK-DVTAHAEILAIRMGCRIL 66
           S AL +A  A  R   P  A VA     II+ AGN +   + D T HAE++A     R L
Sbjct: 23  SIALSDASRA--RGRHPFAALVADQAGNIIASAGNNSMPPEGDPTQHAELVAAAQAARAL 80

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPK 106
             E L +  LY + EPC MCA AI    I R+ Y  S  K
Sbjct: 81  PPEQLADCTLYTSAEPCCMCAGAIYWTGIGRVVYALSEHK 120


>gi|313673619|ref|YP_004051730.1| riboflavin biosynthesis protein ribd [Calditerrivibrio
           nitroreducens DSM 19672]
 gi|312940375|gb|ADR19567.1| riboflavin biosynthesis protein RibD [Calditerrivibrio
           nitroreducens DSM 19672]
          Length = 385

 Score = 48.9 bits (115), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 42/128 (32%), Positives = 59/128 (46%), Gaps = 21/128 (16%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEV-DLYVTLEPCT 84
           VGAV V N K+I R  +    +     HAEI A++        E  PE  DLYVTLEPC+
Sbjct: 28  VGAVVVKNGKVIGRGYHTGFGM----PHAEIEALK------DCEESPEGGDLYVTLEPCS 77

Query: 85  M------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSR 138
                  C  AI  + I+R++ G  +P         +    A      E++ G +E    
Sbjct: 78  TTGKTPPCTDAIIKSGIKRVFIGVVDPNPNHSGKAIKILNDAGI----EVFLGFNEHVCA 133

Query: 139 QIIQDFFK 146
           +II+DF K
Sbjct: 134 EIIEDFTK 141


>gi|310790867|gb|EFQ26400.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Glomerella graminicola M1.001]
          Length = 149

 Score = 48.9 bits (115), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/95 (31%), Positives = 45/95 (47%), Gaps = 2/95 (2%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           ++ A+EEA+  A    +P+GA  V  + K++ R  NR  ++     H E  A+    R L
Sbjct: 7   LAIAIEEAKTGASEGGVPIGAALVSADGKLLGRGHNRRVQMGSAIHHGETDALFNSGR-L 65

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
             +      +Y TL PC MC  A  L  I R+  G
Sbjct: 66  PGKAYKGSTMYTTLSPCDMCTGACLLYGISRVVIG 100


>gi|239624449|ref|ZP_04667480.1| cytidine/deoxycytidylate deaminase family protein [Clostridiales
           bacterium 1_7_47_FAA]
 gi|239520835|gb|EEQ60701.1| cytidine/deoxycytidylate deaminase family protein [Clostridiales
           bacterium 1_7_47FAA]
          Length = 165

 Score = 48.9 bits (115), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 24/53 (45%), Positives = 28/53 (52%)

Query: 51  TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
           T HAE        +  S+E L +  LY T EPC MCA AI  A I R+ YG S
Sbjct: 58  TGHAETQVAEKASQQYSKEFLKDCTLYTTAEPCAMCAGAIYWAGIGRVVYGMS 110


>gi|271964778|ref|YP_003338974.1| guanine deaminase [Streptosporangium roseum DSM 43021]
 gi|270507953|gb|ACZ86231.1| Guanine deaminase [Streptosporangium roseum DSM 43021]
          Length = 188

 Score = 48.9 bits (115), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 38/130 (29%), Positives = 53/130 (40%), Gaps = 33/130 (25%)

Query: 7   FMSCALEEAQNAALRNEI-PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           FM+ A+  A  + +     P G V V +  II+R  NR     D TAH E+ AIR   +I
Sbjct: 6   FMTEAVRLATESVMNGWGGPFGTVIVKDGDIIARGQNRVLLTGDPTAHGEVEAIRKAIQI 65

Query: 66  L-------------------------SQEILPE-------VDLYVTLEPCTMCAAAISLA 93
           L                         S + LP          LY +  PC MC +AI  +
Sbjct: 66  LNPWAPSISEEYQNESTLTLVPRPEGSPDPLPRRAGMLLGCSLYTSGAPCPMCMSAIYWS 125

Query: 94  RIRRLYYGAS 103
           RI  +Y+G+ 
Sbjct: 126 RIDSVYFGSD 135


>gi|330903491|gb|EGH34063.1| cytosine deaminase [Pseudomonas syringae pv. japonica str.
           M301072PT]
          Length = 125

 Score = 48.9 bits (115), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/78 (35%), Positives = 39/78 (50%), Gaps = 1/78 (1%)

Query: 24  IPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83
           +P+G+V     KII R  NR  +    T H E+ A+    R     +  +  LY TL PC
Sbjct: 1   MPIGSVIGHGGKIIGRGHNRRVQEGSATKHGEMDALENAGR-QPASVYRDSVLYTTLSPC 59

Query: 84  TMCAAAISLARIRRLYYG 101
            MC+ AI L  IR++  G
Sbjct: 60  AMCSGAILLYGIRKVIIG 77


>gi|222111201|ref|YP_002553465.1| cmp/dcmp deaminase zinc-binding [Acidovorax ebreus TPSY]
 gi|221730645|gb|ACM33465.1| CMP/dCMP deaminase zinc-binding [Acidovorax ebreus TPSY]
          Length = 155

 Score = 48.9 bits (115), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 29/104 (27%), Positives = 45/104 (43%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M      +  A+  A +   R   P GAV     ++I+   N      D + HAE+ A+R
Sbjct: 1   MSTDTALLRRAVHLAHDNRARGGRPFGAVIARGGEVIATGVNDIVHSHDPSTHAEMQALR 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASN 104
              R  +   L    +Y +  PC MC AA+ +A   R++Y   N
Sbjct: 61  AATRQRANPSLAGCTVYASGHPCPMCLAALVMAGADRVFYAFDN 104


>gi|134094122|ref|YP_001099197.1| putative guanine deaminase [Herminiimonas arsenicoxydans]
 gi|133738025|emb|CAL61070.1| putative Guanine deaminase (Guanase) (Guanine aminase) (Guanine
           aminohydrolase) (GAH) (GDEase) [Herminiimonas
           arsenicoxydans]
          Length = 153

 Score = 48.9 bits (115), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 29/94 (30%), Positives = 45/94 (47%)

Query: 11  ALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEI 70
           A+  A+N   +   P GAV  ++ +II+   N      D T HAE+  +R   + L +  
Sbjct: 11  AVRLAKNNHQQGGRPFGAVLTMDGEIIATGVNNIVHSHDPTTHAEMETLRAASQRLGRPN 70

Query: 71  LPEVDLYVTLEPCTMCAAAISLARIRRLYYGASN 104
           L    +Y +  PC MC AA+ L  +  +YY   N
Sbjct: 71  LKGSVVYASGHPCPMCLAALVLTGVDAVYYAFDN 104


>gi|157364177|ref|YP_001470944.1| CMP/dCMP deaminase zinc-binding [Thermotoga lettingae TMO]
 gi|157314781|gb|ABV33880.1| CMP/dCMP deaminase zinc-binding [Thermotoga lettingae TMO]
          Length = 209

 Score = 48.5 bits (114), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 31/96 (32%), Positives = 48/96 (50%), Gaps = 9/96 (9%)

Query: 24  IPVGAVAV-LNNKIISRAGNRNRE--------LKDVTAHAEILAIRMGCRILSQEILPEV 74
           +P+G V V  +  IIS+  N   E          +  AHAE+ A+    RI     + + 
Sbjct: 20  LPIGCVIVNGSGNIISKGRNAIHESNFSGYPVFGNSIAHAELNALVSMKRIPDNMEISDY 79

Query: 75  DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI 110
            +Y ++EPC MC  AI ++ IR + YG  +  GGG+
Sbjct: 80  VIYTSMEPCVMCFGAIYMSGIRNVVYGMKDGVGGGL 115


>gi|311068845|ref|YP_003973768.1| fused diaminohydroxyphosphoribosylaminopyrimidine deaminase;
           5-amino-6-(5-phosphoribosylamino) uracil reductase
           [Bacillus atrophaeus 1942]
 gi|310869362|gb|ADP32837.1| fused diaminohydroxyphosphoribosylaminopyrimidine deaminase;
           5-amino-6-(5-phosphoribosylamino) uracil reductase
           [Bacillus atrophaeus 1942]
          Length = 363

 Score = 48.5 bits (114), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 37/107 (34%), Positives = 54/107 (50%), Gaps = 17/107 (15%)

Query: 7   FMSCALEEA-QNAALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           +M+ ALE A Q        P VGAV V N +I+    +    LK   AHAE+ AI+M  +
Sbjct: 5   YMNTALELAKQGEGQTGSNPLVGAVVVKNGEIVGMGAH----LKYGEAHAEVHAIKMAGK 60

Query: 65  ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP 105
            +      + D+YVTLEPC+       CA  I  + I+R++    +P
Sbjct: 61  HVK-----DADIYVTLEPCSHYGKTPPCAELIITSGIKRVFVAMRDP 102


>gi|71019211|ref|XP_759836.1| hypothetical protein UM03689.1 [Ustilago maydis 521]
 gi|46099634|gb|EAK84867.1| hypothetical protein UM03689.1 [Ustilago maydis 521]
          Length = 260

 Score = 48.5 bits (114), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 33/92 (35%), Positives = 42/92 (45%), Gaps = 11/92 (11%)

Query: 23  EIPVGA--VAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS------QEILP-- 72
           + P G   V   +N++I    NR     D T H EI AI+    +L       QEIL   
Sbjct: 63  QAPFGTAIVNTTSNELICAIANRVGSTGDPTQHGEITAIQHCTNVLQRKGLSPQEILAAW 122

Query: 73  -EVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
               LY   EPCTMC +AI  A  + + YG S
Sbjct: 123 KHFSLYTNAEPCTMCLSAIRWAGFKEVIYGTS 154


>gi|312794193|ref|YP_004027116.1| riboflavin biosynthesis protein ribd [Caldicellulosiruptor
           kristjanssonii 177R1B]
 gi|312181333|gb|ADQ41503.1| riboflavin biosynthesis protein RibD [Caldicellulosiruptor
           kristjanssonii 177R1B]
          Length = 371

 Score = 48.5 bits (114), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 45/149 (30%), Positives = 69/149 (46%), Gaps = 20/149 (13%)

Query: 7   FMSCALEEAQNAA---LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
           +M+ ALE A+ A+   L N   VG V V N  II +  ++    K    HAE+LAI    
Sbjct: 9   YMNMALELAKKASPLVLPNP-RVGCVIVKNGTIIGKGYHQKYGEK----HAEVLAIEDAI 63

Query: 64  RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFY 117
           +  +  +L    +YV+LEPC        C  AI  + I+++     +P      NG Q  
Sbjct: 64  K--NGYLLKNATMYVSLEPCCHFGKQPPCTEAIIKSGIKKVVVATRDPNPLVNGNGIQIL 121

Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDFFK 146
                 H  E+  G+ ++ +  I +DFFK
Sbjct: 122 K----QHGIEVVEGVLQKEAESINKDFFK 146


>gi|322386627|ref|ZP_08060252.1| tRNA-specific adenosine deaminase [Streptococcus cristatus ATCC
           51100]
 gi|321269300|gb|EFX52235.1| tRNA-specific adenosine deaminase [Streptococcus cristatus ATCC
           51100]
          Length = 67

 Score = 48.5 bits (114), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 27/68 (39%), Positives = 38/68 (55%), Gaps = 6/68 (8%)

Query: 85  MCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT---CHHSPEIYPGISEQRSRQII 141
           MC+ AI LARI ++ YGA N K G    G   Y + T    +H  E+  G+ E+    I+
Sbjct: 1   MCSGAIGLARIPKVIYGAKNQKFGA---GGSLYDILTDERLNHRVEVESGLLEEECAAIM 57

Query: 142 QDFFKERR 149
           Q+FF+ RR
Sbjct: 58  QNFFRNRR 65


>gi|150864126|ref|XP_001382832.2| hypothetical protein PICST_29473 [Scheffersomyces stipitis CBS
           6054]
 gi|149385382|gb|ABN64803.2| tRNA-specific adenosine deaminase subunit [Scheffersomyces stipitis
           CBS 6054]
          Length = 276

 Score = 48.5 bits (114), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 40/136 (29%), Positives = 65/136 (47%), Gaps = 21/136 (15%)

Query: 22  NEIPVGAV--AVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEI---LPEVDL 76
           NE PV  +   +  N+I+S   N      + T HAE +A++   R+    +     +V L
Sbjct: 25  NETPVSCLIEDIETNEILSIGYNYTNISLNGTKHAEFIAVK---RLRDSNLNIDFGKVRL 81

Query: 77  YVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEI-------Y 129
            V++EPC MCA+ +    I  + YG SN + GG  NG    T+   H  P +       Y
Sbjct: 82  IVSVEPCIMCASFLRQLGIGEVVYGCSNDRFGG--NG----TVLPIHSDPNLPQEPYCSY 135

Query: 130 PGISEQRSRQIIQDFF 145
            GI    + Q++++F+
Sbjct: 136 GGILRSEAIQLLRNFY 151


>gi|116669457|ref|YP_830390.1| cytosine deaminase [Arthrobacter sp. FB24]
 gi|116609566|gb|ABK02290.1| Cytosine deaminase [Arthrobacter sp. FB24]
          Length = 176

 Score = 48.5 bits (114), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 41/88 (46%), Gaps = 3/88 (3%)

Query: 24  IPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83
           IP+GA     N++I+   N   +  D  AH E+ A+R   R   Q+   +  LY TL PC
Sbjct: 42  IPIGAALARGNELIASGHNERVQHGDPIAHGEMAALRAAGR---QKSYRDTTLYTTLAPC 98

Query: 84  TMCAAAISLARIRRLYYGASNPKGGGIE 111
            MC   I   +I R+  G +    G  E
Sbjct: 99  AMCTGTIIQFKIPRVVVGEARTFPGEFE 126


>gi|15805630|ref|NP_294326.1| cytidine/deoxycytidylate deaminase/NUDIX/methyltransferase
           domain-containing protein [Deinococcus radiodurans R1]
 gi|6458301|gb|AAF10182.1|AE001918_7 cytidine/deoxycytidylate deaminase/nudix/methyltransferase domains
           protein [Deinococcus radiodurans R1]
          Length = 548

 Score = 48.5 bits (114), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 37/108 (34%), Positives = 50/108 (46%), Gaps = 11/108 (10%)

Query: 11  ALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDV---------TAHAEILAIR 60
           A+ EA N  L    P+GA  V     I+ R  NR  E +            AHAEI A+ 
Sbjct: 12  AMSEAWNGFLYGSYPIGACIVDAQGNIVGRGRNRLGEPRRAHAGVIGGHDLAHAEINALL 71

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGG 108
               +   E L    L  T+EPC  CA A++++ IR + Y A +P GG
Sbjct: 72  SVPDLRRPECLSWTVL-TTVEPCPQCAGAVAMSGIRGVSYAAPDPWGG 118


>gi|297157114|gb|ADI06826.1| cytidine/deoxycytidine deaminase [Streptomyces bingchenggensis
           BCW-1]
          Length = 143

 Score = 48.5 bits (114), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 32/109 (29%), Positives = 47/109 (43%), Gaps = 8/109 (7%)

Query: 15  AQNAALRNEIPVGAV-AVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPE 73
           A  A    + P G++ A  +  I++ A N  R   D+TAH E+   R   R L  +    
Sbjct: 17  AARAVTLGDAPYGSLLAGPDGTILAEAHNTVRRDNDITAHPELKLARWAARELDPDTAAR 76

Query: 74  VDLYVTLEPCTMCAAAISLARIRRLYYGAS-------NPKGGGIENGTQ 115
             LY + +PC MC   I  + + R+ Y  S       NP+ G     TQ
Sbjct: 77  TTLYTSCQPCGMCGGGIVRSGVGRVVYALSTEQLVELNPQSGDWPTVTQ 125


>gi|222528581|ref|YP_002572463.1| riboflavin biosynthesis protein RibD [Caldicellulosiruptor bescii
           DSM 6725]
 gi|222455428|gb|ACM59690.1| riboflavin biosynthesis protein RibD [Caldicellulosiruptor bescii
           DSM 6725]
          Length = 371

 Score = 48.5 bits (114), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 45/149 (30%), Positives = 70/149 (46%), Gaps = 20/149 (13%)

Query: 7   FMSCALEEAQNAA---LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
           +M+ ALE A+ A+   L N   VG V V N  +I +  ++    K    HAE+LAI    
Sbjct: 9   YMNMALELAKKASPLVLPNP-RVGCVIVKNGTVIGKGYHQKYGEK----HAEVLAIEDAI 63

Query: 64  RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFY 117
           +  +  +L    +YVTLEPC        C  AI  + I+++     +P    + NG    
Sbjct: 64  K--NGYLLKNATMYVTLEPCCHFGKQPPCTDAIIKSGIKKVVVATKDP--NPLVNGKGIQ 119

Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDFFK 146
            L    H  E+  G+ ++ +  I +DFFK
Sbjct: 120 ILK--QHGIEVIEGVLQKEAESINKDFFK 146


>gi|255941100|ref|XP_002561319.1| Pc16g10090 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211585942|emb|CAP93679.1| Pc16g10090 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 148

 Score = 48.5 bits (114), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 32/102 (31%), Positives = 47/102 (46%), Gaps = 2/102 (1%)

Query: 11  ALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQE 69
           A+EEA+       +P+GA  V  + KI+ R  N   +      HAE+ A+    R L   
Sbjct: 10  AVEEAKQGLSEGGVPIGAALVSKDGKILGRGHNMRVQKGSAVLHAEMSALENSGR-LPAS 68

Query: 70  ILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIE 111
                 +Y TL PC MC  A  L +++R+  G +    GG E
Sbjct: 69  AYEGATMYTTLSPCDMCTGACILYKVKRVVIGENKNFMGGEE 110


>gi|264678844|ref|YP_003278751.1| CMP/dCMP deaminase, zinc-binding protein [Comamonas testosteroni
           CNB-2]
 gi|262209357|gb|ACY33455.1| CMP/dCMP deaminase, zinc-binding protein [Comamonas testosteroni
           CNB-2]
          Length = 146

 Score = 48.1 bits (113), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 27/97 (27%), Positives = 47/97 (48%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  A++ A    L+   P GAV    N++++   N      D + HAE+ AIR G +  +
Sbjct: 1   MRMAVDLAHANRLKGGRPFGAVLAQGNEVVATGVNEIIASHDPSTHAEMQAIRAGTQKRA 60

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASN 104
              L  + +Y +  PC MC AA+ +    ++++   N
Sbjct: 61  NPSLAGLSIYASGHPCPMCLAALVMNGAEQVFFAFDN 97


>gi|86139939|ref|ZP_01058504.1| cytosine deaminase [Roseobacter sp. MED193]
 gi|85823357|gb|EAQ43567.1| cytosine deaminase [Roseobacter sp. MED193]
          Length = 147

 Score = 48.1 bits (113), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 29/102 (28%), Positives = 47/102 (46%), Gaps = 3/102 (2%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
            +  A EEA+        P+G+V     +++++  N+  +  D  AH E+ A+R   R  
Sbjct: 8   LLRIAYEEAKAGFDEGGCPIGSVLARGGEVVAQGRNQRVQKGDPIAHGEMDALRKAGR-- 65

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGG 108
            Q+   +  LY +L PC MC   I    I R+  G +   GG
Sbjct: 66  -QKTYRDTTLYTSLSPCMMCTGTIIQFGIPRVVIGENKNFGG 106


>gi|85090433|ref|XP_958414.1| cytosine deaminase [Neurospora crassa OR74A]
 gi|28919775|gb|EAA29178.1| cytosine deaminase [Neurospora crassa OR74A]
          Length = 159

 Score = 48.1 bits (113), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 28/94 (29%), Positives = 43/94 (45%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           ++ A +EA+ +  +  IP+GA  + +  I+   G+  R   D   H    A  +    L 
Sbjct: 7   LAIAFKEAKKSYEQGGIPIGAALISSTGIVLGRGHNQRVQLDSPIHHGETATLLNAGRLP 66

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
                   +Y TL PC MC  AI L +IRR+  G
Sbjct: 67  ASTYANSTMYTTLSPCDMCTGAILLYKIRRVVIG 100


>gi|320589823|gb|EFX02279.1| cmp/dcmp deaminase, zinc-binding protein [Grosmannia clavigera
           kw1407]
          Length = 178

 Score = 48.1 bits (113), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 24/52 (46%), Positives = 27/52 (51%)

Query: 53  HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASN 104
           HAE    R+     SQ  L    LY T EPC MC A I  A I R+ +GASN
Sbjct: 68  HAEASLARLAANHYSQPYLWTCTLYSTWEPCAMCTATIYWANIGRVIFGASN 119


>gi|310644100|ref|YP_003948858.1| riboflavin biosynthesis protein
           (diaminohydroxyphosphoribosylaminopyrimidine deaminase
           (riboflavin-specific deaminase) and
           5-amino-6-(5-phosphoribosylamino)uracil reductase)
           [Paenibacillus polymyxa SC2]
 gi|309249050|gb|ADO58617.1| Riboflavin biosynthesis protein
           (Diaminohydroxyphosphoribosylaminopyrimidine deaminase
           (Riboflavin-specific deaminase) and
           5-amino-6-(5-phosphoribosylamino)uracil reductase)
           [Paenibacillus polymyxa SC2]
          Length = 366

 Score = 48.1 bits (113), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 50/147 (34%), Positives = 69/147 (46%), Gaps = 23/147 (15%)

Query: 7   FMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
           +M  ALE A++A  + E P   VG+V V N +I+    +    LK    HAEI A+RM  
Sbjct: 7   YMRLALENARSAKGQTE-PNPLVGSVIVNNGRIVGIGAH----LKPGEPHAEIHALRM-- 59

Query: 64  RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFY 117
              + E      +YVTLEPC+       CA AI  A IRR+   A +P       G Q  
Sbjct: 60  ---AGEHAQGATIYVTLEPCSHHGRTGPCAEAIVKAGIRRVVIAALDPNPLVSGRGVQIL 116

Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDF 144
             A      E+  G+ EQ S ++ + F
Sbjct: 117 KDAGI----EVIVGVCEQESIRMNEVF 139


>gi|320592583|gb|EFX05013.1| tRNA-specific adenosine deaminase [Grosmannia clavigera kw1407]
          Length = 684

 Score = 48.1 bits (113), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 20/46 (43%), Positives = 33/46 (71%)

Query: 64  RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109
           R+++ +I+    LYVT+EPC MCA+ +    I+++Y+GA+N K GG
Sbjct: 431 RVVNPDIVRGCSLYVTVEPCIMCASMLRQYGIKKVYFGAANDKFGG 476



 Score = 37.4 bits (85), Expect = 0.66,   Method: Composition-based stats.
 Identities = 19/53 (35%), Positives = 31/53 (58%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
           +M+ A+  AQ A   NE PVG V V N ++I++  N     ++ T HAE++ +
Sbjct: 317 YMNEAVAMAQLALRTNETPVGCVLVHNGRVIAKGMNATNMTRNGTRHAELMCL 369


>gi|331212549|ref|XP_003307544.1| tRNA-specific adenosine deaminase subunit TAD2 [Puccinia graminis
           f. sp. tritici CRL 75-36-700-3]
 gi|309297947|gb|EFP74538.1| tRNA-specific adenosine deaminase subunit TAD2 [Puccinia graminis
           f. sp. tritici CRL 75-36-700-3]
          Length = 298

 Score = 48.1 bits (113), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 30/76 (39%), Positives = 42/76 (55%), Gaps = 4/76 (5%)

Query: 14  EAQNAALRNEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEIL 71
           +A  A + NEIPVG V V    +K++S+  NR  E K+   HAE  AI     +   + +
Sbjct: 158 KANEALVANEIPVGCVLVSKTTDKVLSKGRNRTNETKNACLHAEFDAIGGLHSVTPADKI 217

Query: 72  P--EVDLYVTLEPCTM 85
              +V LYVT+EPC M
Sbjct: 218 DWNDVKLYVTVEPCLM 233


>gi|254424276|ref|ZP_05037994.1| Cytidine and deoxycytidylate deaminase zinc-binding region domain
           protein [Synechococcus sp. PCC 7335]
 gi|196191765|gb|EDX86729.1| Cytidine and deoxycytidylate deaminase zinc-binding region domain
           protein [Synechococcus sp. PCC 7335]
          Length = 179

 Score = 48.1 bits (113), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 29/81 (35%), Positives = 38/81 (46%), Gaps = 7/81 (8%)

Query: 25  PVGAVAVL--NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEP 82
           P GA+ V   +  ++   GN      D   HAE + +R      S + L    LY T+EP
Sbjct: 47  PFGAILVAPDDQTVLMAQGN-----VDTVNHAESVLLRTAVTNFSAKYLWNCTLYTTVEP 101

Query: 83  CTMCAAAISLARIRRLYYGAS 103
           C MCAA    A + RL YG S
Sbjct: 102 CAMCAATQYWANVGRLVYGLS 122


>gi|308070849|ref|YP_003872454.1| riboflavin biosynthesis protein ribD [Paenibacillus polymyxa E681]
 gi|305860128|gb|ADM71916.1| Riboflavin biosynthesis protein ribD [Paenibacillus polymyxa E681]
          Length = 366

 Score = 48.1 bits (113), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 50/147 (34%), Positives = 69/147 (46%), Gaps = 23/147 (15%)

Query: 7   FMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
           +M  ALE A++A  + E P   VG+V V N +I+    +    LK    HAEI A+RM  
Sbjct: 7   YMRLALENARSAKGQTE-PNPLVGSVIVNNGRIVGIGAH----LKPGEPHAEIHALRM-- 59

Query: 64  RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFY 117
              + E      +YVTLEPC+       CA AI  A IRR+   A +P       G Q  
Sbjct: 60  ---AGEHAQGATIYVTLEPCSHHGRTGPCAEAIVKAGIRRVVIAALDPNPLVSGRGVQIL 116

Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDF 144
             A      E+  G+ EQ S ++ + F
Sbjct: 117 KDAGI----EVIVGVCEQESIRMNEVF 139


>gi|226308791|ref|YP_002768751.1| cytosine deaminase [Rhodococcus erythropolis PR4]
 gi|229489217|ref|ZP_04383083.1| cytosine deaminase [Rhodococcus erythropolis SK121]
 gi|226187908|dbj|BAH36012.1| putative cytosine deaminase [Rhodococcus erythropolis PR4]
 gi|229324721|gb|EEN90476.1| cytosine deaminase [Rhodococcus erythropolis SK121]
          Length = 154

 Score = 47.8 bits (112), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 28/95 (29%), Positives = 43/95 (45%), Gaps = 1/95 (1%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           F+  A+E+A+       +P+GA  +   ++++   NR  ++     H E   I    R L
Sbjct: 11  FLGLAIEQAKIGWEEGGVPIGAALIHRGEVLAVGRNRRVQMNSAIRHGETDCIERAGR-L 69

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
              +  E  LY TL PC MCA    L  I R+  G
Sbjct: 70  PASVYRECVLYTTLSPCFMCAGTARLYEIPRIVVG 104


>gi|255561486|ref|XP_002521753.1| hydrolase, putative [Ricinus communis]
 gi|223538966|gb|EEF40563.1| hydrolase, putative [Ricinus communis]
          Length = 423

 Score = 47.8 bits (112), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 24/36 (66%)

Query: 75  DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI 110
           D+Y+  EPCTMCA A+   RIRR+++   NP  G +
Sbjct: 347 DIYMVWEPCTMCAMALVHQRIRRIFFAFPNPNAGAL 382


>gi|315504158|ref|YP_004083045.1| cmp/dcmp deaminase zinc-binding protein [Micromonospora sp. L5]
 gi|315410777|gb|ADU08894.1| CMP/dCMP deaminase zinc-binding protein [Micromonospora sp. L5]
          Length = 141

 Score = 47.8 bits (112), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 30/99 (30%), Positives = 46/99 (46%), Gaps = 1/99 (1%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           F+  A+E A  A    E P  ++ V  +  ++    N     KDVTAH E+   R   R 
Sbjct: 8   FLRRAVELADRAGASGERPFASLLVGADGTVLIEDHNTVVSDKDVTAHPELKLARWAARQ 67

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASN 104
           L+ E      +Y + +PC MC  AI+ + + R+ Y  S 
Sbjct: 68  LAPEAAVATTMYTSCQPCPMCTVAINASGLGRVVYALST 106


>gi|297843134|ref|XP_002889448.1| hydrolase/ zinc ion binding protein [Arabidopsis lyrata subsp.
           lyrata]
 gi|297335290|gb|EFH65707.1| hydrolase/ zinc ion binding protein [Arabidopsis lyrata subsp.
           lyrata]
          Length = 400

 Score = 47.8 bits (112), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 25/36 (69%)

Query: 75  DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI 110
           D+++ LEPC MCA A+   RI+R++Y   NP  GG+
Sbjct: 331 DIFLLLEPCAMCAMALVHQRIKRIFYAFPNPTAGGL 366


>gi|254474256|ref|ZP_05087646.1| Cytidine and deoxycytidylate deaminase zinc-binding region domain
           protein [Pseudovibrio sp. JE062]
 gi|211956630|gb|EEA91840.1| Cytidine and deoxycytidylate deaminase zinc-binding region domain
           protein [Pseudovibrio sp. JE062]
          Length = 169

 Score = 47.8 bits (112), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 39/133 (29%), Positives = 56/133 (42%), Gaps = 18/133 (13%)

Query: 25  PVG-AVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83
           P G AV     +++++A +   +  D T H EI AIR+          P   LY T EPC
Sbjct: 31  PFGCAVYSSEGELLAQAYDSVIKECDPTCHGEINAIRLASETSKTRSFPGGILYSTCEPC 90

Query: 84  TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT----------LATCHHSPE--IYPG 131
            MC AA   A    L +GA        E+ T F+            A+    PE  I+ G
Sbjct: 91  AMCMAATIWAGFDTLVFGAYTN-----EDATNFWPQEMNLRAKDLAASMVQRPEIAIFEG 145

Query: 132 ISEQRSRQIIQDF 144
           +  Q  +Q+  D+
Sbjct: 146 VERQACQQLFTDY 158


>gi|257388119|ref|YP_003177892.1| CMP/dCMP deaminase zinc-binding [Halomicrobium mukohataei DSM
           12286]
 gi|257170426|gb|ACV48185.1| CMP/dCMP deaminase zinc-binding [Halomicrobium mukohataei DSM
           12286]
          Length = 154

 Score = 47.8 bits (112), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 34/130 (26%), Positives = 55/130 (42%), Gaps = 12/130 (9%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           +  A++ A+ AA R + P G+V V +++ I+ A NR     D+  H E+       R  +
Sbjct: 15  VQSAIDLARAAADRGDRPFGSVLVRDDEQIAAASNRVVTEDDLRRHPELDLALAAERSYT 74

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYY------------GASNPKGGGIENGTQ 115
            E      +Y + EPC MCA  +    + R+ Y            G    + G I +G  
Sbjct: 75  PEERARTVMYTSTEPCPMCAGGLRSVGLGRIVYSVGGDEIHEFTGGEPTVRSGAILDGVT 134

Query: 116 FYTLATCHHS 125
             T   CH +
Sbjct: 135 DVTGPVCHEA 144


>gi|255715725|ref|XP_002554144.1| KLTH0E15290p [Lachancea thermotolerans]
 gi|238935526|emb|CAR23707.1| KLTH0E15290p [Lachancea thermotolerans]
          Length = 152

 Score = 47.4 bits (111), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 37/150 (24%), Positives = 60/150 (40%), Gaps = 13/150 (8%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLN--NKIISRAGNRNRELKDVTAHAEILAI 59
           K   + M  A +EA        +P+G   + N    ++    N   +    T H EI  +
Sbjct: 3   KWDGLGMEIAYKEAAKGMEEGGVPIGGCLIDNRDGTVVGSGHNMRFQKGSATLHGEISTL 62

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS-NPKGGGIENGTQFYT 118
              C  +   +     LY TL PC MC  AI L  I R   G + N KG    +G ++  
Sbjct: 63  E-NCGRMKGSVYKNCTLYTTLSPCDMCTGAILLYGIPRCVVGENVNFKG----DGERYLA 117

Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKER 148
              C         + +++ ++I++ F  ER
Sbjct: 118 ERGCEVRV-----VDDEKCKKIMKQFIDER 142


>gi|159465663|ref|XP_001691042.1| predicted protein [Chlamydomonas reinhardtii]
 gi|158279728|gb|EDP05488.1| predicted protein [Chlamydomonas reinhardtii]
          Length = 93

 Score = 47.4 bits (111), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 27/79 (34%), Positives = 43/79 (54%), Gaps = 14/79 (17%)

Query: 75  DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIE-----NGTQFYTLATCHHSPEIY 129
           +LYVT+EPC MCA A+SL   R++YYG  N + GG       NG        C H    +
Sbjct: 3   ELYVTVEPCIMCAGALSLLGFRQVYYGCGNDRFGGCGSILPVNGE------GCVHVGRGF 56

Query: 130 P---GISEQRSRQIIQDFF 145
           P   G+  + + +++++F+
Sbjct: 57  PAQGGLFPEEAVELLREFY 75


>gi|330825753|ref|YP_004389056.1| CMP/dCMP deaminase zinc-binding protein [Alicycliphilus
           denitrificans K601]
 gi|329311125|gb|AEB85540.1| CMP/dCMP deaminase zinc-binding protein [Alicycliphilus
           denitrificans K601]
          Length = 163

 Score = 47.4 bits (111), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 24/80 (30%), Positives = 39/80 (48%)

Query: 25  PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84
           P GAV   + + ++   N   +  D +AHAE+ A+R   R      L    +Y +  PC 
Sbjct: 32  PFGAVIARDGRQLATGVNETHQTCDPSAHAEMQALREATRARRDASLAGCSVYASGHPCP 91

Query: 85  MCAAAISLARIRRLYYGASN 104
           MC AA+ +A   R+++   N
Sbjct: 92  MCLAALVMAGAERVFFAFDN 111


>gi|319762326|ref|YP_004126263.1| cmp/dcmp deaminase zinc-binding protein [Alicycliphilus
           denitrificans BC]
 gi|317116887|gb|ADU99375.1| CMP/dCMP deaminase zinc-binding protein [Alicycliphilus
           denitrificans BC]
          Length = 163

 Score = 47.4 bits (111), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 24/80 (30%), Positives = 39/80 (48%)

Query: 25  PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84
           P GAV   + + ++   N   +  D +AHAE+ A+R   R      L    +Y +  PC 
Sbjct: 32  PFGAVIARDGRQLATGVNETHQTCDPSAHAEMQALREATRARRDASLAGCSVYASGHPCP 91

Query: 85  MCAAAISLARIRRLYYGASN 104
           MC AA+ +A   R+++   N
Sbjct: 92  MCLAALVMAGAERVFFAFDN 111


>gi|227818281|ref|YP_002822252.1| cytidine/deoxycytidylate deaminase family protein [Sinorhizobium
           fredii NGR234]
 gi|227337280|gb|ACP21499.1| cytidine/deoxycytidylate deaminase family protein [Sinorhizobium
           fredii NGR234]
          Length = 164

 Score = 47.4 bits (111), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 31/96 (32%), Positives = 49/96 (51%), Gaps = 4/96 (4%)

Query: 11  ALEEAQNAALRNEIPVGAVAVL--NNKIISRAGNRNRELKDVTAHAE-ILAIRMGCRILS 67
           A + A+ +    + P G++      N ++ +    + E  D TAHAE +LA R G +   
Sbjct: 16  AFDVARRSREGGDHPFGSILADRDGNVLLEQCNGYSSEGGDRTAHAERLLATRAG-KSYD 74

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
            + L E  +Y + EPC MC+ AI  A I R+ +G S
Sbjct: 75  LDFLAECTMYTSAEPCAMCSGAIYWAGIGRVVFGLS 110


>gi|187608406|ref|NP_001119919.1| hypothetical protein LOC791769 [Danio rerio]
 gi|169145700|emb|CAQ15728.1| novel protein similar to vertebrate tRNA-specific adenosine
           deaminase 3 (ADAT3) [Danio rerio]
          Length = 336

 Score = 47.4 bits (111), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 23/58 (39%), Positives = 34/58 (58%), Gaps = 1/58 (1%)

Query: 75  DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGI 132
           DLYVT EPC MCA A+  +RI R++YGAS    G   +  + +     +H  E++ G+
Sbjct: 269 DLYVTREPCVMCAMALVHSRISRVFYGAST-ADGAFGSRYKIHCQKDLNHRFEVFKGV 325


>gi|22204218|emb|CAD43470.1| novel protein [Danio rerio]
          Length = 336

 Score = 47.4 bits (111), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 23/58 (39%), Positives = 34/58 (58%), Gaps = 1/58 (1%)

Query: 75  DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGI 132
           DLYVT EPC MCA A+  +RI R++YGAS    G   +  + +     +H  E++ G+
Sbjct: 269 DLYVTREPCVMCAMALVHSRISRVFYGAST-ADGAFGSRYKIHCQKDLNHRFEVFKGV 325


>gi|290954851|ref|YP_003486033.1| nucleotide deaminase [Streptomyces scabiei 87.22]
 gi|260644377|emb|CBG67462.1| putative nucleotide deaminase [Streptomyces scabiei 87.22]
          Length = 182

 Score = 47.4 bits (111), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 33/111 (29%), Positives = 48/111 (43%), Gaps = 32/111 (28%)

Query: 25  PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL------------------ 66
           P GAV + + +IISR  NR     D TAHAE+ AIR   + L                  
Sbjct: 19  PFGAVIIRDGEIISRGQNRVLLTGDPTAHAEVEAIRKAVQRLNPEAPSISEEHQNESTLA 78

Query: 67  -------SQEILPE-------VDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
                  S + +PE         +Y++  PC MC +AI  +RI  +Y+ + 
Sbjct: 79  YVSRPEGSPDPVPERARMLMGCSIYISGAPCPMCMSAIYWSRIDAVYFASD 129


>gi|118593750|ref|ZP_01551119.1| hypothetical protein SIAM614_03553 [Stappia aggregata IAM 12614]
 gi|118433660|gb|EAV40323.1| hypothetical protein SIAM614_03553 [Stappia aggregata IAM 12614]
          Length = 189

 Score = 47.4 bits (111), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 30/96 (31%), Positives = 47/96 (48%), Gaps = 2/96 (2%)

Query: 11  ALEEAQNAALRNEIPVGAV-AVLNNKIISRAGN-RNRELKDVTAHAEILAIRMGCRILSQ 68
           A E A+ A    + P G + A  +  ++   GN  + E +D+TAHAE L      +    
Sbjct: 41  AFEIARQARETGDHPFGCLLAGPDGDVLMEQGNGYSAEGQDMTAHAERLLATRASKRWRP 100

Query: 69  EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASN 104
           + L    LY + EPC MC+ A+  A I R+ +G + 
Sbjct: 101 DFLAGCTLYTSAEPCAMCSGAVYWAGIGRVVFGQTE 136


>gi|121702783|ref|XP_001269656.1| cytosine deaminase, putative [Aspergillus clavatus NRRL 1]
 gi|119397799|gb|EAW08230.1| cytosine deaminase, putative [Aspergillus clavatus NRRL 1]
          Length = 148

 Score = 47.4 bits (111), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 32/102 (31%), Positives = 46/102 (45%), Gaps = 2/102 (1%)

Query: 11  ALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQE 69
           A+EEA+       +P+GA  V  + KI+ R  N   +      HAE+ A+    R L   
Sbjct: 10  AVEEAKKGLAEGGVPIGAALVSKDGKILGRGHNMRVQKGSAVLHAEMAALEDSGR-LPGS 68

Query: 70  ILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIE 111
                 +Y TL PC MC  A  L  ++R+  G +    GG E
Sbjct: 69  AYEGATMYTTLSPCDMCTGACILYNVKRVVIGENKNFVGGEE 110


>gi|52627172|ref|NP_001005300.1| tRNA-specific adenosine deaminase-like protein 3 [Danio rerio]
 gi|147742915|sp|Q8JFW4|ADAT3_DANRE RecName: Full=tRNA-specific adenosine deaminase-like protein 3;
           AltName: Full=tRNA-specific adenosine-34 deaminase
           subunit adat3
 gi|22204386|emb|CAD43442.1| SI:dZ72B14.5 (novel protein) [Danio rerio]
 gi|55250228|gb|AAH85551.1| Si:dkey-204g5.2 [Danio rerio]
          Length = 336

 Score = 47.4 bits (111), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 23/58 (39%), Positives = 34/58 (58%), Gaps = 1/58 (1%)

Query: 75  DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGI 132
           DLYVT EPC MCA A+  +RI R++YGAS    G   +  + +     +H  E++ G+
Sbjct: 269 DLYVTREPCVMCAMALVHSRISRVFYGAST-ADGAFGSRYKIHCQKDLNHRFEVFKGV 325


>gi|190347436|gb|EDK39700.2| conserved hypothetical protein [Meyerozyma guilliermondii ATCC
           6260]
          Length = 150

 Score = 47.4 bits (111), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 35/142 (24%), Positives = 59/142 (41%), Gaps = 11/142 (7%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKD-VTAHAEILAIRMGCRIL 66
           ++ A+EEA+       +P+G   +  +  +   G+  R  KD  T H EI  +    R L
Sbjct: 9   LAIAIEEAKKGYEEGGVPIGGALISEDGTVLGRGHNLRFQKDSATLHGEISTLENAGR-L 67

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
              +     +Y TL PC+MC+ A  +  ++R+  G         EN T          S 
Sbjct: 68  KGSVYKNCTMYTTLSPCSMCSGACIMYGVKRVVVG---------ENETFMGAEDWIRKSG 118

Query: 127 EIYPGISEQRSRQIIQDFFKER 148
                ++ Q  + ++  F KER
Sbjct: 119 IEVVNLNNQECKDLMAKFIKER 140


>gi|254466209|ref|ZP_05079620.1| cytosine deaminase [Rhodobacterales bacterium Y4I]
 gi|206687117|gb|EDZ47599.1| cytosine deaminase [Rhodobacterales bacterium Y4I]
          Length = 148

 Score = 47.4 bits (111), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 29/102 (28%), Positives = 47/102 (46%), Gaps = 3/102 (2%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
            +  A EEA+        P+G+V     +++++  N+  +  D  AH E+ A+R   R  
Sbjct: 9   LLRIAYEEAKAGFDEGGCPIGSVLARGGQVVAQGRNQRVQKGDPIAHGEMDALRKAGR-- 66

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGG 108
            Q    +  LY +L PC MC+  I    I R+  G +   GG
Sbjct: 67  -QTSYRDTVLYTSLSPCMMCSGTIVQFGIPRVVIGDTQNFGG 107


>gi|84503628|ref|ZP_01001669.1| probable deaminase [Oceanicola batsensis HTCC2597]
 gi|84387959|gb|EAQ01010.1| probable deaminase [Oceanicola batsensis HTCC2597]
          Length = 155

 Score = 47.4 bits (111), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 28/102 (27%), Positives = 48/102 (47%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           N  M  A++ A+        P   + V + +I++ A N  ++  D + HAEI AIR+  +
Sbjct: 4   NDLMQRAIDLAKENVENGGWPFSTIIVKDGEILAEAVNSVQKSHDPSDHAEIAAIRIASK 63

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPK 106
            L+   L    +YV   PC MC   + +A++  + Y     K
Sbjct: 64  KLASPDLSGCTMYVVGLPCPMCLTCMIMAKLTDVVYAVDVEK 105


>gi|87131002|gb|ABD24095.1| cytosine deaminase [Clavispora lusitaniae]
          Length = 153

 Score = 47.4 bits (111), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 28/95 (29%), Positives = 41/95 (43%), Gaps = 2/95 (2%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  A EEAQ       IP+G   +  +  I+ R  N   +    T H EI  +    R L
Sbjct: 9   MQIAFEEAQKGYAEGGIPIGGALIHEDGTILGRGHNMRIQKNSATLHGEISTLENAGR-L 67

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
              +     +Y TL PC MC+ A  +  ++R+  G
Sbjct: 68  PGGVYKNCTMYTTLSPCHMCSGACLMYGVKRVVLG 102


>gi|312877999|ref|ZP_07737939.1| riboflavin biosynthesis protein RibD [Caldicellulosiruptor
           lactoaceticus 6A]
 gi|311795234|gb|EFR11623.1| riboflavin biosynthesis protein RibD [Caldicellulosiruptor
           lactoaceticus 6A]
          Length = 371

 Score = 47.4 bits (111), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 44/149 (29%), Positives = 69/149 (46%), Gaps = 20/149 (13%)

Query: 7   FMSCALEEAQNAA---LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
           +M+ AL+ A+ A+   L N   VG V V N  II +  ++    K    HAE+LAI    
Sbjct: 9   YMNMALDLAKKASPLVLPNP-RVGCVIVKNGTIIGKGYHQKYGEK----HAEVLAIEDAI 63

Query: 64  RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFY 117
           +  +  +L    +YV+LEPC        C  AI  + I+++     +P      NG Q  
Sbjct: 64  K--NGYLLKNATMYVSLEPCCHFGKQPPCTEAIIKSGIKKVVVATRDPNPLVNGNGIQIL 121

Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDFFK 146
                 H  E+  G+ ++ +  I +DFFK
Sbjct: 122 K----QHGIEVVEGVLQKEAESINKDFFK 146


>gi|94985175|ref|YP_604539.1| CMP/dCMP deaminase, zinc-binding [Deinococcus geothermalis DSM
           11300]
 gi|94555456|gb|ABF45370.1| CMP/dCMP deaminase, zinc-binding protein [Deinococcus geothermalis
           DSM 11300]
          Length = 187

 Score = 47.0 bits (110), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 34/110 (30%), Positives = 50/110 (45%), Gaps = 11/110 (10%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDV-------TAHAEILA 58
           ++  AL  A+ A      PVGAV V    ++I+R  NR  E +          AHAE+  
Sbjct: 19  YLQEALRLAREAQAAGSAPVGAVLVNAAGEVIARGRNRVGEAQTPEHVGAASVAHAEMDV 78

Query: 59  IRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGG 108
                ++     L    LY +LEPC MC  A +L  + R+ +   +P GG
Sbjct: 79  FFSVGKVQDAATL---TLYTSLEPCLMCGGAAALLEVGRVVWATDDPWGG 125


>gi|154333185|ref|XP_001562853.1| deaminase [Leishmania braziliensis MHOM/BR/75/M2904]
 gi|134059858|emb|CAM37286.1| putative deaminase [Leishmania braziliensis MHOM/BR/75/M2904]
          Length = 276

 Score = 47.0 bits (110), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 27/58 (46%), Positives = 34/58 (58%), Gaps = 5/58 (8%)

Query: 71  LPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT--CHHSP 126
           L E  LYVT+EPC MC+A +   RI  +++G  NP+ GG  NGT    L T  C H P
Sbjct: 149 LAEYVLYVTVEPCVMCSAMLLYNRIEHVFFGCRNPRFGG--NGT-VLALHTPLCLHEP 203


>gi|50554041|ref|XP_504429.1| YALI0E26543p [Yarrowia lipolytica]
 gi|49650298|emb|CAG80030.1| YALI0E26543p [Yarrowia lipolytica]
          Length = 357

 Score = 47.0 bits (110), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 20/39 (51%), Positives = 27/39 (69%)

Query: 73  EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIE 111
           E+ +Y T EPC MCA A++ +R+ RL Y  S+P  GGIE
Sbjct: 279 EMHVYTTHEPCPMCAMALNHSRVGRLVYVESSPGSGGIE 317


>gi|321249831|ref|XP_003191590.1| cytosine deaminase [Cryptococcus gattii WM276]
 gi|317458057|gb|ADV19803.1| Cytosine deaminase, putative [Cryptococcus gattii WM276]
          Length = 165

 Score = 47.0 bits (110), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 35/121 (28%), Positives = 57/121 (47%), Gaps = 7/121 (5%)

Query: 7   FMSCALEEAQNAALRNEIPVGA--VAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           FMS A ++A  +     IP+GA  V +  ++IISR  N   +L     H E+  +    R
Sbjct: 17  FMSVAHDQALKSRSEGGIPIGAALVHLPTSRIISRGHNNRVQLSSNVRHGEMDCLENLGR 76

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG----IENGTQFYTLA 120
           +  + +L E  ++ TL PC MC+A   L +I  +    +    GG    ++NG     L 
Sbjct: 77  V-PEGLLRECAMFTTLSPCIMCSATCILYKIPTVVLAENENFLGGEQLLVDNGVNVINLD 135

Query: 121 T 121
           +
Sbjct: 136 S 136


>gi|299529821|ref|ZP_07043254.1| CMP/dCMP deaminase, zinc-binding protein [Comamonas testosteroni
           S44]
 gi|298722235|gb|EFI63159.1| CMP/dCMP deaminase, zinc-binding protein [Comamonas testosteroni
           S44]
          Length = 146

 Score = 47.0 bits (110), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 27/97 (27%), Positives = 47/97 (48%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  A++ A    L+   P GAV    N++++   N      D + HAE+ AIR G +  +
Sbjct: 1   MRLAVDLAHANRLQGGRPFGAVLAQGNEVVATGVNEIIVSHDPSTHAEMQAIRAGTQKRA 60

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASN 104
              L  + +Y +  PC MC AA+ +    ++++   N
Sbjct: 61  NPSLAGLSIYASGHPCPMCLAALVMNGAEQVFFAFDN 97


>gi|157123926|ref|XP_001653977.1| cytidine and deoxycytidylate deaminase zinc-binding region [Aedes
           aegypti]
 gi|108882879|gb|EAT47104.1| cytidine and deoxycytidylate deaminase zinc-binding region [Aedes
           aegypti]
          Length = 387

 Score = 47.0 bits (110), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 23/62 (37%), Positives = 38/62 (61%), Gaps = 6/62 (9%)

Query: 47  LKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPK 106
           L D++ H + LA + G  + +       D+Y+T EPC MCA A++ +R+RR++Y  +  K
Sbjct: 309 LDDISPHEDNLA-KYGPYLCTG-----YDVYLTHEPCIMCAMALTHSRVRRVFYHFNTAK 362

Query: 107 GG 108
           GG
Sbjct: 363 GG 364


>gi|312977170|ref|ZP_07788918.1| riboflavin biosynthesis protein RibD [Lactobacillus crispatus
           CTV-05]
 gi|310895601|gb|EFQ44667.1| riboflavin biosynthesis protein RibD [Lactobacillus crispatus
           CTV-05]
          Length = 355

 Score = 47.0 bits (110), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 45/135 (33%), Positives = 63/135 (46%), Gaps = 26/135 (19%)

Query: 1   MKKGNVFMSCALEEAQNA---ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57
           M+K N +M+ ALEEA+       +N + VGAV V N ++++   + +        HAE  
Sbjct: 4   MEKDNFYMNLALEEAKKGRYQTWKNPM-VGAVIVKNGQVLATGYHHHYGQN----HAE-- 56

Query: 58  AIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPK----G 107
             R     L+ E L    LYVTLEPC        C+  I  + I+R+  G  +P     G
Sbjct: 57  --RDAISKLTPEQLFNSTLYVTLEPCNHYGKQPPCSDLIIKSGIKRVVVGQIDPHKLVTG 114

Query: 108 GGI----ENGTQFYT 118
            GI    ENG Q  T
Sbjct: 115 KGIAKLQENGVQVTT 129


>gi|116193885|ref|XP_001222755.1| hypothetical protein CHGG_06660 [Chaetomium globosum CBS 148.51]
 gi|88182573|gb|EAQ90041.1| hypothetical protein CHGG_06660 [Chaetomium globosum CBS 148.51]
          Length = 551

 Score = 47.0 bits (110), Expect = 0.001,   Method: Composition-based stats.
 Identities = 26/64 (40%), Positives = 37/64 (57%), Gaps = 9/64 (14%)

Query: 70  ILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF-------YTLATC 122
           ++ E  LYVT+EPC MCA+ +    I+++Y+GA N K GG   G  F       YT+A+ 
Sbjct: 344 VITECTLYVTVEPCVMCASLLRQFGIKKVYFGAVNDKFGG--TGGVFRIHKNSPYTMASA 401

Query: 123 HHSP 126
             SP
Sbjct: 402 PPSP 405



 Score = 40.8 bits (94), Expect = 0.055,   Method: Composition-based stats.
 Identities = 28/70 (40%), Positives = 39/70 (55%), Gaps = 5/70 (7%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  AL+ A+ A   NE PVG V V   ++I+R  N     ++ T HAE++AI     +L
Sbjct: 219 FMREALDMARLALKTNETPVGCVLVYKGRVIARGMNATNVTRNGTRHAELMAISA---LL 275

Query: 67  SQEILPEVDL 76
           S   LP+ DL
Sbjct: 276 S--YLPKSDL 283


>gi|332878860|ref|ZP_08446575.1| riboflavin biosynthesis protein RibD [Capnocytophaga sp. oral taxon
           329 str. F0087]
 gi|332683211|gb|EGJ56093.1| riboflavin biosynthesis protein RibD [Capnocytophaga sp. oral taxon
           329 str. F0087]
          Length = 350

 Score = 47.0 bits (110), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 37/126 (29%), Positives = 60/126 (47%), Gaps = 17/126 (13%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85
           VG+V V N+++I    +    ++   AHAE+ AI     +  +++L E  LYV+LEPC+ 
Sbjct: 27  VGSVIVYNDRVIGEGWH----VRAGEAHAEVRAI---ASVKDKQLLSESTLYVSLEPCSH 79

Query: 86  ------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139
                 CA  I   RI R+  G ++P       G Q    A C    E+  G+ ++    
Sbjct: 80  YGKTPPCADLIIAHRIPRVVIGCTDPFAKVAGRGIQKLREAGC----EVVVGVCQEECEA 135

Query: 140 IIQDFF 145
           + + FF
Sbjct: 136 LNKRFF 141


>gi|226357300|ref|YP_002787040.1| cytidine/deoxycytidylate deaminase [Deinococcus deserti VCD115]
 gi|226319290|gb|ACO47286.1| putative Cytidine/deoxycytidylate deaminase, zinc-binding region
           (CMP/dCMP deaminase, zinc-binding) [Deinococcus deserti
           VCD115]
          Length = 221

 Score = 47.0 bits (110), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 36/113 (31%), Positives = 53/113 (46%), Gaps = 21/113 (18%)

Query: 11  ALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTA---------HAEILAIR 60
           AL EA  A L    P+GA  V     +++R  NR  E + V A         HAEI A+ 
Sbjct: 21  ALSEAWEAYLHGSYPIGACVVDREGHVLARGRNRLGEPRRVEAGVISGHDLAHAEINAL- 79

Query: 61  MGCRILSQEILPEVDLY-----VTLEPCTMCAAAISLARIRRLYYGASNPKGG 108
                L+   +P  + Y      T++PC  CA AI+++ +R + Y A +P  G
Sbjct: 80  -----LALTDMPRPECYSWTVLTTVQPCPQCAGAIAMSAVRAVEYAAPDPWAG 127


>gi|330506583|ref|YP_004383011.1| cytosine deaminase [Methanosaeta concilii GP-6]
 gi|328927391|gb|AEB67193.1| cytosine deaminase [Methanosaeta concilii GP-6]
          Length = 154

 Score = 47.0 bits (110), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 36/99 (36%), Positives = 52/99 (52%), Gaps = 3/99 (3%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           ++FM  AL+EA+  +    IP+GAV V   +II R  NR  + +D   HAEI  +R   R
Sbjct: 2   DIFMQAALDEARKGSREGGIPIGAVLVEEGRIIGRGRNRRVQQRDQMMHAEIDCLR-NAR 60

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
           +          LY TL PC MCA A+    I+++  G +
Sbjct: 61  LTGG--YHNAVLYTTLMPCYMCAGAVVYFGIKKVVVGEA 97


>gi|296158395|ref|ZP_06841226.1| CMP/dCMP deaminase zinc-binding [Burkholderia sp. Ch1-1]
 gi|295891339|gb|EFG71126.1| CMP/dCMP deaminase zinc-binding [Burkholderia sp. Ch1-1]
          Length = 180

 Score = 47.0 bits (110), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 40/147 (27%), Positives = 61/147 (41%), Gaps = 17/147 (11%)

Query: 15  AQNAALRNEIPVGAVAVLNNK--IISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILP 72
           A+ A L    P GAV V  ++  ++   GN      D   HAE +  R+     + E L 
Sbjct: 39  AERATLLGHHPFGAVLVGPDQETVLMEQGN-----VDTVNHAESVLARVAALNFTPEYLW 93

Query: 73  EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPK-----GGGIENGTQF----YTLATCH 123
              LY ++EPC MCA  +  A I R+ +G +  +     G   EN T      Y    C 
Sbjct: 94  SCTLYTSVEPCCMCAGTMYWANIGRVVFGMTEKRLLEATGDHAENPTMSVDCRYVFDHCQ 153

Query: 124 HSPEIYPGISEQRSRQI-IQDFFKERR 149
              E+   ++E  +  + +Q  F   R
Sbjct: 154 KPVEVIGPVAEMEAEVMGVQRRFWSSR 180


>gi|222106196|ref|YP_002546987.1| CMP/dCMP deaminase zinc-binding [Agrobacterium vitis S4]
 gi|221737375|gb|ACM38271.1| CMP/dCMP deaminase zinc-binding [Agrobacterium vitis S4]
          Length = 163

 Score = 47.0 bits (110), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 28/98 (28%), Positives = 47/98 (47%), Gaps = 1/98 (1%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           F+  + + A  A      P GA+ V  + +++    N     +D+T HAE + +    + 
Sbjct: 14  FLRLSFKVALRAQETGNHPFGAILVGPDGEVLMEQENAYNPTRDMTGHAERVLMTRASQA 73

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
            + E L +  +Y + EPC MCA A   A I R+ +G S
Sbjct: 74  YTPERLNQCTMYTSAEPCAMCAGAAYWAGIGRVVFGLS 111


>gi|297734758|emb|CBI16992.3| unnamed protein product [Vitis vinifera]
          Length = 402

 Score = 47.0 bits (110), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 23/36 (63%)

Query: 75  DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI 110
           D+Y+  EPC MCA A+   RIRR++Y   NP  G +
Sbjct: 333 DIYLVWEPCAMCAMALVHQRIRRIFYAFPNPNAGAL 368


>gi|261335602|emb|CBH18596.1| deaminase, putative [Trypanosoma brucei gambiense DAL972]
          Length = 365

 Score = 46.6 bits (109), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 17/56 (30%), Positives = 34/56 (60%)

Query: 74  VDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIY 129
           +D++V+ EPC MC+ A+  +R+RR++Y   NP  GG+ +    + +   +H   ++
Sbjct: 282 MDMFVSHEPCVMCSMALVHSRVRRVFYCFPNPVHGGLGSTVSIHAIQELNHHFRVF 337


>gi|74026040|ref|XP_829586.1| deaminase [Trypanosoma brucei TREU927]
 gi|70834972|gb|EAN80474.1| deaminase, putative [Trypanosoma brucei]
          Length = 365

 Score = 46.6 bits (109), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 17/56 (30%), Positives = 34/56 (60%)

Query: 74  VDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIY 129
           +D++V+ EPC MC+ A+  +R+RR++Y   NP  GG+ +    + +   +H   ++
Sbjct: 282 MDMFVSHEPCVMCSMALVHSRVRRVFYCFPNPVHGGLGSTVSIHAIQELNHHFRVF 337


>gi|327179698|gb|AEA30246.1| putative cytosine/adenosine deaminase [Streptomyces sp. Acta 2897]
          Length = 159

 Score = 46.6 bits (109), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 35/132 (26%), Positives = 53/132 (40%), Gaps = 9/132 (6%)

Query: 24  IPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83
           IP   V V + +I+    NR RE  D TAHAE++A+R          +    L  + EPC
Sbjct: 28  IPFSGVVVGSGRILGTGFNRVREDNDPTAHAEVVALREATTKYGIHAVAGATLIASGEPC 87

Query: 84  TMCAAAISLARIRRLYYGASNPKGG--GIENGTQFYTLATCHHSPEIYP----GISEQRS 137
            +C  A   A I  + + A        G +  + +   A     PE +P     +    +
Sbjct: 88  ALCYLAARYAGIGHIVHAADRRTAARYGFDYTSSYAVFAE---DPERWPVKVTALHLPEA 144

Query: 138 RQIIQDFFKERR 149
            Q  QD+    R
Sbjct: 145 EQPFQDYLTMSR 156


>gi|115938354|ref|XP_001201090.1| PREDICTED: hypothetical protein, partial [Strongylocentrotus
           purpuratus]
          Length = 146

 Score = 46.6 bits (109), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 19/33 (57%), Positives = 25/33 (75%)

Query: 75  DLYVTLEPCTMCAAAISLARIRRLYYGASNPKG 107
           DLY+T EPC MCA A+  +RIRR++Y  S+P G
Sbjct: 78  DLYITQEPCVMCAMALVHSRIRRVFYIDSHPDG 110


>gi|115931277|ref|XP_001180302.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus]
          Length = 708

 Score = 46.6 bits (109), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 19/33 (57%), Positives = 25/33 (75%)

Query: 75  DLYVTLEPCTMCAAAISLARIRRLYYGASNPKG 107
           DLY+T EPC MCA A+  +RIRR++Y  S+P G
Sbjct: 640 DLYITQEPCVMCAMALVHSRIRRVFYIDSHPDG 672


>gi|221066605|ref|ZP_03542710.1| CMP/dCMP deaminase zinc-binding [Comamonas testosteroni KF-1]
 gi|220711628|gb|EED66996.1| CMP/dCMP deaminase zinc-binding [Comamonas testosteroni KF-1]
          Length = 146

 Score = 46.6 bits (109), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 27/97 (27%), Positives = 46/97 (47%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  A+  A    L+   P GAV    N++++   N      D + HAE+ AIR G +  +
Sbjct: 1   MRLAVNLAHANRLQGGRPFGAVLAQGNEVVATGVNEIIASHDPSTHAEMQAIRAGTQQRA 60

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASN 104
              L  + +Y +  PC MC AA+ +    ++++   N
Sbjct: 61  NPSLAGLSIYASGHPCPMCLAALVMNGAEQVFFAFDN 97


>gi|271965977|ref|YP_003340173.1| cytosine/adenosine deaminase [Streptosporangium roseum DSM 43021]
 gi|270509152|gb|ACZ87430.1| cytosine/adenosine deaminase [Streptosporangium roseum DSM 43021]
          Length = 141

 Score = 46.6 bits (109), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 29/106 (27%), Positives = 49/106 (46%), Gaps = 1/106 (0%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           F+  A+E A  A    + P G++    +  +I+   N      D+TAH E+   R   R 
Sbjct: 8   FLRRAIELAGTARAAGDPPFGSLLTGPDGSVIAEDRNTVLTDSDITAHPELKLARWAARE 67

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIE 111
           L  E      +Y + +PC MCA AI  + + R+ +  S  +  G++
Sbjct: 68  LDPETAAATTMYTSCQPCGMCAGAIERSGLGRVVFALSTEQLTGLK 113


>gi|146416895|ref|XP_001484417.1| conserved hypothetical protein [Meyerozyma guilliermondii ATCC
           6260]
          Length = 150

 Score = 46.6 bits (109), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 34/142 (23%), Positives = 62/142 (43%), Gaps = 11/142 (7%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKD-VTAHAEILAIRMGCRIL 66
           ++ A+EEA+       +P+G   +  +  +   G+  R  KD  T H EI  +    R L
Sbjct: 9   LAIAIEEAKKGYEEGGVPIGGALISEDGTVLGRGHNLRFQKDSATLHGEISTLENAGR-L 67

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
              +     +Y TL PC+MC+ A  +  ++R+  G  N    G E+  +   +   +   
Sbjct: 68  KGSVYKNCTMYTTLSPCSMCSGACIMYGVKRVVVG-ENETFMGAEDWIRKLGIEVVN--- 123

Query: 127 EIYPGISEQRSRQIIQDFFKER 148
                ++ Q  + ++  F KER
Sbjct: 124 -----LNNQECKDLMAKFIKER 140


>gi|114770250|ref|ZP_01447788.1| cytosine deaminase [alpha proteobacterium HTCC2255]
 gi|114549087|gb|EAU51970.1| cytosine deaminase [alpha proteobacterium HTCC2255]
          Length = 147

 Score = 46.6 bits (109), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 31/105 (29%), Positives = 47/105 (44%), Gaps = 3/105 (2%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
            +  A  EA+        P+G+V     +I+S+  N+  +  D  AH E+ A+R   R  
Sbjct: 8   LLRIAYNEAKLGFEEGGCPIGSVLARGAEIVSQGRNQRVQKGDPIAHGEMDALRKAGR-- 65

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIE 111
            Q+   +  LY +L PC MC   I    I R+  G +   GG  E
Sbjct: 66  -QKTYRDTTLYTSLSPCMMCTGTILQFGIPRVVIGENKNFGGNEE 109


>gi|171676245|ref|XP_001903076.1| hypothetical protein [Podospora anserina S mat+]
 gi|170936188|emb|CAP60848.1| unnamed protein product [Podospora anserina S mat+]
          Length = 685

 Score = 46.6 bits (109), Expect = 0.001,   Method: Composition-based stats.
 Identities = 19/40 (47%), Positives = 29/40 (72%)

Query: 70  ILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109
           ++ E  LYVT+EPC MCA+ +   +I+++Y+GA N K GG
Sbjct: 446 VIQESILYVTVEPCVMCASLLRQLKIKKVYFGAVNDKFGG 485


>gi|163735385|ref|ZP_02142819.1| cytosine deaminase [Roseobacter litoralis Och 149]
 gi|161391394|gb|EDQ15729.1| cytosine deaminase [Roseobacter litoralis Och 149]
          Length = 150

 Score = 46.6 bits (109), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 28/102 (27%), Positives = 47/102 (46%), Gaps = 3/102 (2%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
            +  A +EA+        P+G+V     +++++  N+  +  D  AH E+ A+R   R  
Sbjct: 11  LLRIAYDEAKAGFDEGGCPIGSVLARGGEVVAQGRNQRVQKGDPIAHGEMDALRKAGR-- 68

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGG 108
            Q+   +  LY +L PC MC   I    I R+  G +   GG
Sbjct: 69  -QKSYRDTTLYTSLSPCMMCTGTIIQFGIPRVVIGENKNFGG 109


>gi|225459965|ref|XP_002266270.1| PREDICTED: hypothetical protein, partial [Vitis vinifera]
          Length = 397

 Score = 46.6 bits (109), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 23/36 (63%)

Query: 75  DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI 110
           D+Y+  EPC MCA A+   RIRR++Y   NP  G +
Sbjct: 328 DIYLVWEPCAMCAMALVHQRIRRIFYAFPNPNAGAL 363


>gi|213972523|ref|NP_001135424.1| adenosine deaminase, tRNA-specific 3, TAD3 homolog [Nasonia
           vitripennis]
          Length = 367

 Score = 46.6 bits (109), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 16/53 (30%), Positives = 35/53 (66%)

Query: 77  YVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIY 129
           ++  EPC++CA A+  +R+ R++YGA+NPK G + +    +++   +H  +++
Sbjct: 295 FLLQEPCSLCAMALLHSRVSRIFYGATNPKTGILGSRATLHSVPGLNHRYQVW 347


>gi|225709398|gb|ACO10545.1| tRNA-specific adenosine deaminase-like protein 3 [Caligus
           rogercresseyi]
          Length = 257

 Score = 46.6 bits (109), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 16/56 (28%), Positives = 36/56 (64%)

Query: 74  VDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIY 129
           +D+Y+  EPC MC+ A+   RI+R+++   +P+ G +++  + +TL   +H  +++
Sbjct: 194 LDIYLKNEPCAMCSMALVHMRIKRIFFIQDSPQCGALKSRMKLHTLPGINHVFQVF 249


>gi|126178774|ref|YP_001046739.1| cytosine deaminase [Methanoculleus marisnigri JR1]
 gi|125861568|gb|ABN56757.1| Cytosine deaminase [Methanoculleus marisnigri JR1]
          Length = 140

 Score = 46.6 bits (109), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 38/96 (39%), Positives = 49/96 (51%), Gaps = 3/96 (3%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M CA+EEA+       IP+G+V V + +II R  NR  +  D   HAEI  +R   RI S
Sbjct: 1   MKCAVEEAEAGLREGGIPIGSVLVRDGRIIGRGRNRRVQNDDPVLHAEIDCLRNAGRIGS 60

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
                E  LY TL PC +CA A     I ++  G S
Sbjct: 61  ---YAECTLYSTLMPCYLCAGAAVQFGIGKVVAGES 93


>gi|254580711|ref|XP_002496341.1| ZYRO0C16148p [Zygosaccharomyces rouxii]
 gi|238939232|emb|CAR27408.1| ZYRO0C16148p [Zygosaccharomyces rouxii]
          Length = 155

 Score = 46.6 bits (109), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 34/143 (23%), Positives = 58/143 (40%), Gaps = 11/143 (7%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M  A EEA      N +P+G   +   + +++ R  N   +    T H EI  +   C  
Sbjct: 12  MDIAYEEALIGYKENGVPIGGCLIDSRDGRVLGRGHNLRYQKNSATLHGEISTLE-NCGR 70

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           L   +     +Y TL PC MC  AI +  I R   G  +      ++  + Y  +  H  
Sbjct: 71  LPASVYRHATMYTTLSPCDMCTGAIVMYGIPRCVIGEHD----NFKSPGEVYLESRGHQV 126

Query: 126 PEIYPGISEQRSRQIIQDFFKER 148
                 + ++R + +++ F  ER
Sbjct: 127 VV----VDDKRCKDLMKKFILER 145


>gi|148242060|ref|YP_001227217.1| putative cytosine deaminase [Synechococcus sp. RCC307]
 gi|147850370|emb|CAK27864.1| Putative cytosine deaminase [Synechococcus sp. RCC307]
          Length = 149

 Score = 46.6 bits (109), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 31/96 (32%), Positives = 45/96 (46%), Gaps = 4/96 (4%)

Query: 7   FMSCALEEAQNAALRNEIPVGAV-AVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
            M  A  EA+       IP+GAV A  + ++++R  N+  +  D T+H E   IR   R 
Sbjct: 9   LMDQARAEAELGWAEGGIPIGAVLATESGEVVARGHNQRVQNGDPTSHGETQCIRNAGR- 67

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
             +    ++ L  TL PC MCA    L   RR+  G
Sbjct: 68  --RRDWHQLTLVTTLSPCPMCAGTAVLLGFRRVLIG 101


>gi|70733030|ref|YP_262803.1| cytidine/deoxycytidylate deaminase family protein [Pseudomonas
           fluorescens Pf-5]
 gi|68347329|gb|AAY94935.1| cytidine/deoxycytidylate deaminase family protein [Pseudomonas
           fluorescens Pf-5]
          Length = 169

 Score = 46.2 bits (108), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 35/96 (36%), Positives = 50/96 (52%), Gaps = 2/96 (2%)

Query: 11  ALEEAQNAALRNEIPVGA-VAVLNNKIISRAGNRNRELK-DVTAHAEILAIRMGCRILSQ 68
           +++ A+ A  R   P  A VA  + K+I+ AGN +   + D T HAE+ A  +  + LS 
Sbjct: 23  SIQLAEEAKARGRHPFAALVADRDGKVIASAGNNSMPPEGDPTQHAELAAAALAAKRLSP 82

Query: 69  EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASN 104
           + L    LY + EPC MCA AI    I R+ Y  S 
Sbjct: 83  QALAGCTLYTSAEPCCMCAGAIYWTGIGRVVYALSE 118


>gi|302869363|ref|YP_003838000.1| CMP/dCMP deaminase [Micromonospora aurantiaca ATCC 27029]
 gi|302572222|gb|ADL48424.1| CMP/dCMP deaminase zinc-binding [Micromonospora aurantiaca ATCC
           27029]
          Length = 141

 Score = 46.2 bits (108), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 29/99 (29%), Positives = 46/99 (46%), Gaps = 1/99 (1%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           F+  A+E A  A    E P  ++ V  +  ++    N     KDVTAH E+   R   R 
Sbjct: 8   FLRRAVELADRAGASGERPFASLLVGADGTVLIEDHNTVVSDKDVTAHPELKLARWAARQ 67

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASN 104
           L+ E      ++ + +PC MC  AI+ + + R+ Y  S 
Sbjct: 68  LAPEAAVATTMFTSCQPCPMCTVAINASGLGRVVYALST 106


>gi|255071429|ref|XP_002499388.1| hypothetical protein MICPUN_112644 [Micromonas sp. RCC299]
 gi|226514651|gb|ACO60647.1| hypothetical protein MICPUN_112644 [Micromonas sp. RCC299]
          Length = 353

 Score = 46.2 bits (108), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 20/56 (35%), Positives = 33/56 (58%), Gaps = 1/56 (1%)

Query: 75  DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQ-FYTLATCHHSPEIY 129
           D Y+  EPC MCA A++ +R+RR+ +GA +P  G +  G    +   T +H  ++Y
Sbjct: 277 DAYLVREPCVMCAMALTHSRVRRVIFGAGSPGNGALGGGKHSLHGQRTLNHHYQVY 332


>gi|186473011|ref|YP_001860353.1| CMP/dCMP deaminase zinc-binding [Burkholderia phymatum STM815]
 gi|184195343|gb|ACC73307.1| CMP/dCMP deaminase zinc-binding [Burkholderia phymatum STM815]
          Length = 180

 Score = 46.2 bits (108), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 29/91 (31%), Positives = 42/91 (46%), Gaps = 7/91 (7%)

Query: 15  AQNAALRNEIPVGAVAVLNNK--IISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILP 72
           A+ A L    P GA+ V  ++  ++   GN      D   HAE +  RM     + + L 
Sbjct: 37  AERATLMGHHPFGAILVGPDQESVLIEQGN-----VDTVNHAESVLARMAALNFTPQYLW 91

Query: 73  EVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
              LY T+EPC MCA     A I R+ +G +
Sbjct: 92  SCTLYTTVEPCCMCAGTAYWANIGRVVFGMT 122


>gi|66806435|ref|XP_636940.1| CMP/dCMP deaminase, zinc-binding domain-containing protein
           [Dictyostelium discoideum AX4]
 gi|60465344|gb|EAL63435.1| CMP/dCMP deaminase, zinc-binding domain-containing protein
           [Dictyostelium discoideum AX4]
          Length = 239

 Score = 46.2 bits (108), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 22/62 (35%), Positives = 32/62 (51%)

Query: 42  NRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
           N  R++KD+T HAEI+ I+    +       +  LY T E C MC  AI  +   ++ YG
Sbjct: 85  NLGRQMKDLTQHAEIVVIQKANALYGISNFSDYTLYTTGESCLMCQGAILYSGFSKVVYG 144

Query: 102 AS 103
            S
Sbjct: 145 TS 146


>gi|220910961|ref|YP_002486270.1| CMP/dCMP deaminase zinc-binding [Arthrobacter chlorophenolicus A6]
 gi|219857839|gb|ACL38181.1| CMP/dCMP deaminase zinc-binding [Arthrobacter chlorophenolicus A6]
          Length = 160

 Score = 46.2 bits (108), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 39/88 (44%), Gaps = 3/88 (3%)

Query: 24  IPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83
           IP+GA    N  +I+   N   +  D  AH E+ A+R   R   Q    +  LY TL PC
Sbjct: 38  IPIGAALARNGVVIASGHNERVQNGDPIAHGEMSALRAAGR---QRSYRDTTLYTTLAPC 94

Query: 84  TMCAAAISLARIRRLYYGASNPKGGGIE 111
            MC   I   +I R+  G +    G  E
Sbjct: 95  AMCTGTIIQFKIPRVVVGEARTFPGEFE 122


>gi|312128288|ref|YP_003993162.1| riboflavin biosynthesis protein ribd [Caldicellulosiruptor
           hydrothermalis 108]
 gi|311778307|gb|ADQ07793.1| riboflavin biosynthesis protein RibD [Caldicellulosiruptor
           hydrothermalis 108]
          Length = 371

 Score = 46.2 bits (108), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 47/153 (30%), Positives = 70/153 (45%), Gaps = 28/153 (18%)

Query: 7   FMSCALEEAQNAA---LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
           +M+ ALE A+ A+   L N   VG V V N  II +  ++    K    HAE+LAI    
Sbjct: 9   YMNMALELAKKASPLVLPNP-RVGCVIVKNGTIIGKGYHQKYGEK----HAEVLAIEDAI 63

Query: 64  RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP----KGGGIENG 113
           +  +   L    +YV+LEPC        C  AI  + I+++     +P     G GI+  
Sbjct: 64  K--NGYSLKNATMYVSLEPCCHFGKQPPCTEAIIKSGIKKVVIATRDPNPFVNGKGIQIL 121

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
            Q        H  E+  G+ E+ +  I +DFFK
Sbjct: 122 KQ--------HGIEVVEGVLEKEAESINKDFFK 146


>gi|281200522|gb|EFA74740.1| hypothetical protein PPL_11771 [Polysphondylium pallidum PN500]
          Length = 237

 Score = 46.2 bits (108), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 23/81 (28%), Positives = 41/81 (50%), Gaps = 2/81 (2%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85
           V  +   NN ++    N  +   ++ +H EI+AI     + +  +   + LY T EPC M
Sbjct: 84  VATIYDANNNLMCSGVNTGKP--NMISHGEIVAINNCSALYNTTVFTNMTLYTTGEPCAM 141

Query: 86  CAAAISLARIRRLYYGASNPK 106
           CA+A+  A  + + YG +N +
Sbjct: 142 CASALLWADFKTVVYGTANKR 162


>gi|260940691|ref|XP_002614645.1| hypothetical protein CLUG_05423 [Clavispora lusitaniae ATCC 42720]
 gi|238851831|gb|EEQ41295.1| hypothetical protein CLUG_05423 [Clavispora lusitaniae ATCC 42720]
          Length = 323

 Score = 46.2 bits (108), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 19/33 (57%), Positives = 24/33 (72%)

Query: 76  LYVTLEPCTMCAAAISLARIRRLYYGASNPKGG 108
           +Y T EPCTMCA A+  +RIR+L Y   +PKGG
Sbjct: 252 IYTTHEPCTMCAMALVHSRIRQLIYVYDHPKGG 284


>gi|317968925|ref|ZP_07970315.1| putative cytosine deaminase [Synechococcus sp. CB0205]
          Length = 144

 Score = 46.2 bits (108), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 32/96 (33%), Positives = 44/96 (45%), Gaps = 4/96 (4%)

Query: 7   FMSCALEEAQNAALRNEIPVGAV-AVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
            +  A  EA+       IP+GAV A  +  I++R  N+  +  D T+H E   IR   R 
Sbjct: 4   LVDAARAEAERGWSEGGIPIGAVLAQEDGTIVARGHNQRVQNGDPTSHGETQCIRNPGR- 62

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
             +    E+ L  TL PC MCA    L   RR+  G
Sbjct: 63  --RRDWRELTLVTTLSPCPMCAGTAVLLGFRRVVIG 96


>gi|187924612|ref|YP_001896254.1| CMP/dCMP deaminase zinc-binding [Burkholderia phytofirmans PsJN]
 gi|187715806|gb|ACD17030.1| CMP/dCMP deaminase zinc-binding [Burkholderia phytofirmans PsJN]
          Length = 180

 Score = 46.2 bits (108), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 29/91 (31%), Positives = 43/91 (47%), Gaps = 7/91 (7%)

Query: 15  AQNAALRNEIPVGAVAVLNNK--IISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILP 72
           A+ A L    P GAV V  ++  ++   GN      D   HAE +  R+     + E L 
Sbjct: 39  AERATLLGHHPFGAVLVGPDQETVLMEQGN-----VDTVNHAESVLARVAALNFTPEYLW 93

Query: 73  EVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
              LY ++EPC MCA  +  A I R+ +G +
Sbjct: 94  SCTLYTSVEPCCMCAGTMYWANIGRVVFGMT 124


>gi|294658696|ref|XP_002770827.1| DEHA2F15488p [Debaryomyces hansenii CBS767]
 gi|202953318|emb|CAR66350.1| DEHA2F15488p [Debaryomyces hansenii]
          Length = 147

 Score = 46.2 bits (108), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 30/103 (29%), Positives = 46/103 (44%), Gaps = 5/103 (4%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  A EEA+    +  +P+G   +  +  I+ R  N   +    T H EI  +    R L
Sbjct: 9   MKIAFEEAKK---KGGVPIGGALIHEDGTILGRGHNMRFQSSSATLHGEISTLENAGR-L 64

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109
              I  +  +Y TL PC MC  A  +  I+R+  G ++   GG
Sbjct: 65  KGSIYKKCTMYTTLSPCHMCTGACIMYGIKRVVLGENDNFVGG 107


>gi|53749134|gb|AAU90052.1| At5g24670 [Arabidopsis thaliana]
 gi|55733733|gb|AAV59263.1| At5g24670 [Arabidopsis thaliana]
          Length = 400

 Score = 46.2 bits (108), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 25/36 (69%)

Query: 75  DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI 110
           D+++ LEPCTMCA A+   RI+R++Y   N   GG+
Sbjct: 331 DIFLLLEPCTMCAMALVHQRIKRIFYAFPNTTAGGL 366


>gi|79519581|ref|NP_197855.3| catalytic/ hydrolase/ zinc ion binding [Arabidopsis thaliana]
 gi|332005964|gb|AED93347.1| cytidine/deoxycytidylate deaminase-like protein [Arabidopsis
           thaliana]
          Length = 400

 Score = 46.2 bits (108), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 25/36 (69%)

Query: 75  DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI 110
           D+++ LEPCTMCA A+   RI+R++Y   N   GG+
Sbjct: 331 DIFLLLEPCTMCAMALVHQRIKRIFYAFPNTTAGGL 366


>gi|332005965|gb|AED93348.1| cytidine/deoxycytidylate deaminase-like protein [Arabidopsis
           thaliana]
          Length = 404

 Score = 46.2 bits (108), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 25/36 (69%)

Query: 75  DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI 110
           D+++ LEPCTMCA A+   RI+R++Y   N   GG+
Sbjct: 335 DIFLLLEPCTMCAMALVHQRIKRIFYAFPNTTAGGL 370


>gi|110679616|ref|YP_682623.1| cytosine deaminase [Roseobacter denitrificans OCh 114]
 gi|109455732|gb|ABG31937.1| cytosine deaminase [Roseobacter denitrificans OCh 114]
          Length = 147

 Score = 46.2 bits (108), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 28/102 (27%), Positives = 47/102 (46%), Gaps = 3/102 (2%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
            +  A +EA+        P+G+V     +++++  N+  +  D  AH E+ A+R   R  
Sbjct: 8   MLRIAYDEAKAGFDEGGCPIGSVLARGGEVVAQGRNQRVQKGDPIAHGEMDALRKAGR-- 65

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGG 108
            Q+   +  LY +L PC MC   I    I R+  G +   GG
Sbjct: 66  -QKSYRDTTLYTSLSPCMMCTGTIIQFGIPRVVIGENRNFGG 106


>gi|290993580|ref|XP_002679411.1| purine deaminase [Naegleria gruberi]
 gi|284093027|gb|EFC46667.1| purine deaminase [Naegleria gruberi]
          Length = 203

 Score = 45.8 bits (107), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 27/79 (34%), Positives = 38/79 (48%), Gaps = 2/79 (2%)

Query: 25  PVGAVAVLN--NKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEP 82
           P GA+ + N  N+II  A N      D T HAE+    M  +   ++ L    +Y + EP
Sbjct: 64  PFGALLIDNDTNEIILEAHNTVHTENDRTRHAELNLSSMASKKYPRDYLTNCTMYTSTEP 123

Query: 83  CTMCAAAISLARIRRLYYG 101
           C MCA AI    I ++ Y 
Sbjct: 124 CIMCAGAIFWVGIGKVVYA 142


>gi|157874070|ref|XP_001685530.1| hypothetical protein [Leishmania major strain Friedlin]
 gi|68128602|emb|CAJ08734.1| conserved hypothetical protein [Leishmania major strain Friedlin]
          Length = 542

 Score = 45.8 bits (107), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/56 (37%), Positives = 34/56 (60%)

Query: 74  VDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIY 129
           +DLYVT EPC MCA A+  +RI+R+++   N   GG+      +++A+ +H    Y
Sbjct: 475 LDLYVTHEPCVMCAMALVHSRIQRVFFLFRNAVHGGLGGRYHLHSMASLNHHFSAY 530


>gi|170117507|ref|XP_001889940.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164635076|gb|EDQ99389.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 153

 Score = 45.8 bits (107), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 32/99 (32%), Positives = 51/99 (51%), Gaps = 6/99 (6%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNK-----IISRAGNRNRELKDVTAHAEILAIRMG 62
           M  A+ EAQ    +  IP+G+V +L N+       +  G+ + E    ++   I A+   
Sbjct: 6   MILAISEAQMGHKQGGIPIGSVLLLPNESDAEGTFTLLGSGHNERIQKSSPTLISALENA 65

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
            R LS E+  +  +Y TL PC+MC+ AI L +I R+  G
Sbjct: 66  GR-LSPEVYRKSTIYTTLSPCSMCSGAILLYKIPRVVIG 103


>gi|110736606|dbj|BAF00268.1| hypothetical protein [Arabidopsis thaliana]
          Length = 226

 Score = 45.8 bits (107), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 25/36 (69%)

Query: 75  DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI 110
           D+++ LEPCTMCA A+   RI+R++Y   N   GG+
Sbjct: 157 DIFLLLEPCTMCAMALVHQRIKRIFYAFPNTTAGGL 192


>gi|187735315|ref|YP_001877427.1| riboflavin biosynthesis protein RibD [Akkermansia muciniphila ATCC
           BAA-835]
 gi|187425367|gb|ACD04646.1| riboflavin biosynthesis protein RibD [Akkermansia muciniphila ATCC
           BAA-835]
          Length = 356

 Score = 45.8 bits (107), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 36/111 (32%), Positives = 55/111 (49%), Gaps = 12/111 (10%)

Query: 3   KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           + + +M+ A++ A N   L +  P VGAV V  N++I    ++   L     HAE  AI 
Sbjct: 11  QDDCWMNMAIKLASNGIGLTSPNPCVGAVIVHENQVIGSGFHKKAGL----PHAEREAIA 66

Query: 61  MGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP 105
            G    +  +  +  LYVTLEPC+       C  AI   R +R+ YG+ +P
Sbjct: 67  DGVANGNAPLFADSTLYVTLEPCSTSGKTPPCTDAILKYRFKRVVYGSEDP 117


>gi|241956270|ref|XP_002420855.1| cytosine aminohydrolase, putative; cytosine deaminase, putative
           [Candida dubliniensis CD36]
 gi|223644198|emb|CAX41008.1| cytosine aminohydrolase, putative [Candida dubliniensis CD36]
          Length = 150

 Score = 45.8 bits (107), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 29/101 (28%), Positives = 50/101 (49%), Gaps = 5/101 (4%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVT-AHAEILAIR 60
           KKG   +  AL++A+ +     IP+G+  + ++  +   G+  R  K  +  H E+ A+ 
Sbjct: 6   KKG---LQIALDQAKKSYFEGGIPIGSCIISSDGTVLGQGHNERIQKHSSILHGEMSALE 62

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
              R L  +   +  +Y TL PC+MC  AI L   +R+  G
Sbjct: 63  NAGR-LPGKTYKDCTIYTTLSPCSMCTGAILLYGFKRVVMG 102


>gi|209364139|ref|YP_001424993.2| guanine deaminase [Coxiella burnetii Dugway 5J108-111]
 gi|207082072|gb|ABS77888.2| guanine deaminase [Coxiella burnetii Dugway 5J108-111]
          Length = 298

 Score = 45.8 bits (107), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 38/125 (30%), Positives = 53/125 (42%), Gaps = 28/125 (22%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAG---------NRNRELKDVTAHA 54
           G+ +   A EEA  +A     P GAV V   +I  ++G         N + +  D TAHA
Sbjct: 123 GDKWAKLANEEALKSAKLGSPPFGAVIV---QIDDKSGRVFRYWVDHNHSVDWHDPTAHA 179

Query: 55  EILAIRMGCRILSQEILPEVD----------------LYVTLEPCTMCAAAISLARIRRL 98
           E+  IR   R L+   L  +                 +Y + EPC MC AAI  A I  L
Sbjct: 180 EMSVIRKAARELNVTDLGHIRKEDSKLSQPSEWSHCVIYSSAEPCPMCMAAIYWAGIHYL 239

Query: 99  YYGAS 103
            + A+
Sbjct: 240 VFSAT 244


>gi|108757223|ref|YP_632926.1| riboflavin biosynthesis protein RibD [Myxococcus xanthus DK 1622]
 gi|108461103|gb|ABF86288.1| riboflavin biosynthesis protein RibD [Myxococcus xanthus DK 1622]
          Length = 387

 Score = 45.8 bits (107), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 40/109 (36%), Positives = 55/109 (50%), Gaps = 21/109 (19%)

Query: 7   FMSCALEEAQNAALR---NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM-G 62
           FM  ALEEA     R   N + VGAV V   +II+R  ++    K  +AHAE++A+   G
Sbjct: 31  FMRIALEEAAKGLGRTSPNPV-VGAVLVKGGRIIARGYHK----KAGSAHAEVVALEAAG 85

Query: 63  CRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP 105
            R          DLY TLEPC        C+ AI  A +RR+   +++P
Sbjct: 86  ARAKG------ADLYTTLEPCDHYGRTPPCSMAIIEAGVRRVICASADP 128


>gi|34810500|pdb|1OX7|A Chain A, Crystal Structure Of Yeast Cytosine Deaminase Apo-Enzyme:
           Inorganic Zinc Bound
 gi|34810501|pdb|1OX7|B Chain B, Crystal Structure Of Yeast Cytosine Deaminase Apo-Enzyme:
           Inorganic Zinc Bound
          Length = 161

 Score = 45.8 bits (107), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 40/142 (28%), Positives = 61/142 (42%), Gaps = 15/142 (10%)

Query: 11  ALEEAQNAALRNEIPVGAVAVLNNK---IISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           A EEA        +P+G   ++NNK   ++ R  N   +    T H EI  +   C  L 
Sbjct: 21  AYEEAALGYKEGGVPIGG-CLINNKDGSVLGRGHNXRFQKGSATLHGEISTLEN-CGRLE 78

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS-NPKGGGIENGTQFYTLATCHHSP 126
            ++  +  LY TL PC  C  AI    I R   G + N K      G ++  L T  H  
Sbjct: 79  GKVYKDTTLYTTLSPCDXCTGAIIXYGIPRCVVGENVNFK----SKGEKY--LQTRGHEV 132

Query: 127 EIYPGISEQRSRQIIQDFFKER 148
            +   + ++R ++I + F  ER
Sbjct: 133 VV---VDDERCKKIXKQFIDER 151


>gi|319401871|ref|NP_001187388.1| tRNA-specific adenosine deaminase-like protein 3 [Ictalurus
           punctatus]
 gi|308322883|gb|ADO28579.1| tRNA-specific adenosine deaminase-like protein 3 [Ictalurus
           punctatus]
          Length = 353

 Score = 45.8 bits (107), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 21/61 (34%), Positives = 35/61 (57%), Gaps = 1/61 (1%)

Query: 75  DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISE 134
           +LYVT EPC MCA A+  +RI  ++YG ++P  G +    + +     +H  ++Y G+  
Sbjct: 285 ELYVTREPCVMCAMALVHSRISSVFYGTASPD-GALGTKYKIHCQKELNHHFDVYKGVMR 343

Query: 135 Q 135
           Q
Sbjct: 344 Q 344


>gi|302919326|ref|XP_003052839.1| hypothetical protein NECHADRAFT_67750 [Nectria haematococca mpVI
           77-13-4]
 gi|256733779|gb|EEU47126.1| hypothetical protein NECHADRAFT_67750 [Nectria haematococca mpVI
           77-13-4]
          Length = 482

 Score = 45.8 bits (107), Expect = 0.002,   Method: Composition-based stats.
 Identities = 20/44 (45%), Positives = 30/44 (68%)

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109
           + + I+ E  LYVT+EPC MCA+ +    I+++Y+GA N K GG
Sbjct: 296 VDRSIVRECILYVTVEPCVMCASLLRQLGIKKVYFGAVNDKFGG 339



 Score = 40.4 bits (93), Expect = 0.079,   Method: Composition-based stats.
 Identities = 22/53 (41%), Positives = 32/53 (60%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
           F+  AL+ A+ A   NE PVG V V + K+I+R  N     ++ T HAEI+A+
Sbjct: 178 FIEEALDMARLALRTNETPVGCVLVHDGKVIARGMNATNVTRNGTRHAEIMAL 230


>gi|213962287|ref|ZP_03390550.1| riboflavin biosynthesis protein RibD [Capnocytophaga sputigena
           Capno]
 gi|213954953|gb|EEB66272.1| riboflavin biosynthesis protein RibD [Capnocytophaga sputigena
           Capno]
          Length = 323

 Score = 45.8 bits (107), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 39/126 (30%), Positives = 57/126 (45%), Gaps = 17/126 (13%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85
           VG V V + KII    ++    K    HAE+ AI     +  + +L E  LYV+LEPC  
Sbjct: 22  VGCVIVHDGKIIGEGWHQ----KAGEPHAEVRAI---ASVKDKSLLAESTLYVSLEPCNH 74

Query: 86  ------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139
                 CA  I   RI R+  G ++P       G +    A C    E+  G+ E+  R+
Sbjct: 75  YGKTPPCADLIITHRIPRVVIGTTDPFAKVAGRGIEKLRDAGC----EVTVGVMEKECRE 130

Query: 140 IIQDFF 145
           + + FF
Sbjct: 131 LNKRFF 136


>gi|254392686|ref|ZP_05007860.1| guanine deaminase [Streptomyces clavuligerus ATCC 27064]
 gi|326439435|ref|ZP_08214169.1| Guanine deaminase [Streptomyces clavuligerus ATCC 27064]
 gi|197706347|gb|EDY52159.1| guanine deaminase [Streptomyces clavuligerus ATCC 27064]
          Length = 187

 Score = 45.8 bits (107), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 29/106 (27%), Positives = 47/106 (44%), Gaps = 30/106 (28%)

Query: 25  PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS----------------- 67
           P GAV   N++I++R  NR     D TAH E+ AIR   ++L+                 
Sbjct: 26  PFGAVITKNDEIVARGQNRVLLTGDPTAHGEVEAIRKAIQVLNPWAPSIPETHQNTSTLK 85

Query: 68  ------QEILPE-------VDLYVTLEPCTMCAAAISLARIRRLYY 100
                  ++LP+        ++Y +  PC MC +AI  +R   +Y+
Sbjct: 86  LIRAEPSDLLPKRARMLKGCEIYTSGAPCPMCMSAIYWSRCDAVYF 131


>gi|156059474|ref|XP_001595660.1| hypothetical protein SS1G_03749 [Sclerotinia sclerotiorum 1980]
 gi|154701536|gb|EDO01275.1| hypothetical protein SS1G_03749 [Sclerotinia sclerotiorum 1980
           UF-70]
          Length = 380

 Score = 45.8 bits (107), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 22/55 (40%), Positives = 34/55 (61%), Gaps = 2/55 (3%)

Query: 73  EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI--ENGTQFYTLATCHHS 125
           E++LY+T EPC MC+ AI  +R  R+ +G   PK GG+  +N    Y  A+ ++S
Sbjct: 305 ELELYMTHEPCVMCSMAIVHSRFGRVVFGHRMPKTGGLCADNLLDLYMPASMYNS 359


>gi|294810932|ref|ZP_06769575.1| Cytosine/adenosine deaminase [Streptomyces clavuligerus ATCC 27064]
 gi|294323531|gb|EFG05174.1| Cytosine/adenosine deaminase [Streptomyces clavuligerus ATCC 27064]
          Length = 206

 Score = 45.4 bits (106), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 35/131 (26%), Positives = 56/131 (42%), Gaps = 31/131 (23%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEI-PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
           M K   FM+ A   A  + +     P GAV   N++I++R  NR     D TAH E+ AI
Sbjct: 20  MAKRKKFMAEAARLATESVVNGWGGPFGAVITKNDEIVARGQNRVLLTGDPTAHGEVEAI 79

Query: 60  RMGCRILS-----------------------QEILPE-------VDLYVTLEPCTMCAAA 89
           R   ++L+                        ++LP+        ++Y +  PC MC +A
Sbjct: 80  RKAIQVLNPWAPSIPETHQNTSTLKLIRAEPSDLLPKRARMLKGCEIYTSGAPCPMCMSA 139

Query: 90  ISLARIRRLYY 100
           I  +R   +Y+
Sbjct: 140 IYWSRCDAVYF 150


>gi|157117008|ref|XP_001652931.1| cytidine and deoxycytidylate deaminase zinc-binding region [Aedes
           aegypti]
 gi|108876253|gb|EAT40478.1| cytidine and deoxycytidylate deaminase zinc-binding region [Aedes
           aegypti]
          Length = 376

 Score = 45.4 bits (106), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 17/34 (50%), Positives = 26/34 (76%)

Query: 75  DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGG 108
           D+Y+T EPC MCA A++ +R+RR++Y  +  KGG
Sbjct: 320 DVYLTHEPCIMCAMALTHSRVRRVFYHFNTAKGG 353


>gi|260907588|ref|ZP_05915910.1| cytidine/deoxycytidylate deaminase family protein [Brevibacterium
           linens BL2]
          Length = 264

 Score = 45.4 bits (106), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 32/94 (34%), Positives = 47/94 (50%), Gaps = 2/94 (2%)

Query: 12  LEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELK-DVTAHAEILAIRMGCRILSQE 69
           ++ A +A  R   P  ++ V  +  +I+ AGN +   + D T HAE+ A     R++  E
Sbjct: 112 IDLATDARNRGRHPFASMVVSADGTVIASAGNNSMPPEGDPTQHAELSAAAEAARMVPAE 171

Query: 70  ILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
            LP   LY + EPC MC  AI    I R+ Y  S
Sbjct: 172 ELPTATLYTSAEPCVMCTGAIYWTGIGRIVYALS 205


>gi|295704047|ref|YP_003597122.1| riboflavin biosynthesis protein RibD [Bacillus megaterium DSM 319]
 gi|294801706|gb|ADF38772.1| riboflavin biosynthesis protein RibD [Bacillus megaterium DSM 319]
          Length = 363

 Score = 45.4 bits (106), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 45/149 (30%), Positives = 71/149 (47%), Gaps = 23/149 (15%)

Query: 7   FMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
           +M+ AL+ A++   + E P   VG+V V +N+I+    +    LK    HAEI A+RM  
Sbjct: 7   YMNIALQNARSTKGQTE-PNPLVGSVIVNDNRIVGIGTH----LKAGEPHAEIHALRM-- 59

Query: 64  RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFY 117
              + E       YVTLEPC+       CA A+  A ++++     +P      NG +  
Sbjct: 60  ---AGEQAKGATAYVTLEPCSHHGRTGPCAEALVEAGVKKVVIATLDPNPLVAGNGVEIL 116

Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDFFK 146
             A      E+  G+ E+ SRQ+ + F K
Sbjct: 117 KNAGI----EVITGVCEEESRQMNEVFNK 141


>gi|330797600|ref|XP_003286847.1| hypothetical protein DICPUDRAFT_77728 [Dictyostelium purpureum]
 gi|325083149|gb|EGC36609.1| hypothetical protein DICPUDRAFT_77728 [Dictyostelium purpureum]
          Length = 476

 Score = 45.4 bits (106), Expect = 0.003,   Method: Composition-based stats.
 Identities = 21/54 (38%), Positives = 35/54 (64%), Gaps = 1/54 (1%)

Query: 76  LYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIY 129
           LY+T EPC MC+ A+  +RI+R+ YG+S    GG+ +  + +T  + +H  E+Y
Sbjct: 406 LYLTREPCVMCSMALVHSRIKRVVYGSSGID-GGLGSYLKIHTEKSLNHRFEVY 458


>gi|316978726|gb|EFV61670.1| serine/threonine-protein phosphatase PP1 [Trichinella spiralis]
          Length = 537

 Score = 45.4 bits (106), Expect = 0.003,   Method: Composition-based stats.
 Identities = 22/69 (31%), Positives = 38/69 (55%), Gaps = 1/69 (1%)

Query: 75  DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISE 134
           D YVT EPC MC+ A+  +RIRR++YG      G + +    + L + +H  +++  I E
Sbjct: 237 DCYVTREPCAMCSMALLHSRIRRVFYGYP-VNHGALGSAAMIHMLKSSNHRFDVFKEILE 295

Query: 135 QRSRQIIQD 143
              + + +D
Sbjct: 296 DVIKILAKD 304


>gi|254498335|ref|ZP_05111074.1| cytidine/deoxycytidylate deaminase [Legionella drancourtii LLAP12]
 gi|254352443|gb|EET11239.1| cytidine/deoxycytidylate deaminase [Legionella drancourtii LLAP12]
          Length = 157

 Score = 45.4 bits (106), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 40/142 (28%), Positives = 64/142 (45%), Gaps = 12/142 (8%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNK-IISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           FM+  +E A +  +    P GA+ V ++K I+ ++ N          H E+  I      
Sbjct: 8   FMTATIEIAASNPIA---PYGAIIVYDDKEILLKSVNSAHH--HPLMHGELSVIHTLFNK 62

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNP-----KGGGIE-NGTQFYTL 119
                + ++ LY T EPC MCAAAI  A I ++ YG S P      G  IE   T+ ++ 
Sbjct: 63  GFNGDVSKLSLYTTAEPCPMCAAAIYWAMIPKVVYGTSIPFLHDLFGRQIEVRATEIFSK 122

Query: 120 ATCHHSPEIYPGISEQRSRQII 141
               ++ E+  G+ E    Q+ 
Sbjct: 123 TPNFYTCELVGGVKEAECNQLF 144


>gi|47222036|emb|CAG08291.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 306

 Score = 45.4 bits (106), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 22/67 (32%), Positives = 38/67 (56%), Gaps = 1/67 (1%)

Query: 74  VDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGIS 133
           +DLYVT EPC MCA A+  +RI R++YG      G +    + ++    +H  E++ G+ 
Sbjct: 241 LDLYVTREPCVMCAMALVHSRIGRVFYGTVW-SDGALGTKYKIHSQKDLNHRFEVFRGVL 299

Query: 134 EQRSRQI 140
            +R  ++
Sbjct: 300 GRRCEEL 306


>gi|2493560|sp|P78594|FCA1_CANAL RecName: Full=Cytosine deaminase; AltName: Full=Cytosine
           aminohydrolase
 gi|1762320|gb|AAC15782.1| cytosine deaminase [Candida albicans]
          Length = 150

 Score = 45.4 bits (106), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 39/152 (25%), Positives = 66/152 (43%), Gaps = 22/152 (14%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELK-DVTAHAEILAIR 60
           KKG   +  AL++A+ +     IP+G+  + ++  +   G+  R  K     H E+ A+ 
Sbjct: 6   KKG---LQVALDQAKKSYSEGGIPIGSCIISSDDTVLGQGHNERIQKHSAILHGEMSALE 62

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG----IENGTQF 116
              R L  +   +  +Y TL PC+MC  AI L   +R+  G +    G     IENG + 
Sbjct: 63  NAGR-LPGKTYKDCTIYTTLSPCSMCTGAILLYGFKRVVMGENVNFLGNEKLLIENGVEV 121

Query: 117 YTLATCHHSPEIYPGISEQRSRQIIQDFFKER 148
             L             ++Q    ++  F KE+
Sbjct: 122 VNL-------------NDQECIDLMAKFIKEK 140


>gi|319783713|ref|YP_004143189.1| CMP/dCMP deaminase zinc-binding protein [Mesorhizobium ciceri
           biovar biserrulae WSM1271]
 gi|317169601|gb|ADV13139.1| CMP/dCMP deaminase zinc-binding protein [Mesorhizobium ciceri
           biovar biserrulae WSM1271]
          Length = 164

 Score = 45.4 bits (106), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 28/78 (35%), Positives = 35/78 (44%), Gaps = 6/78 (7%)

Query: 25  PVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83
           P G V V  +++++ R GN      D   HAE    R        E L +  L  T EPC
Sbjct: 35  PFGCVLVGPDDRVLMRQGN-----LDTVRHAETELARRAAAAYEPEFLWQCTLVSTFEPC 89

Query: 84  TMCAAAISLARIRRLYYG 101
            MCA  +  A I RL YG
Sbjct: 90  AMCAGTMYWANIGRLVYG 107


>gi|146283237|ref|YP_001173390.1| cytidine/deoxycytidylate deaminase family protein [Pseudomonas
           stutzeri A1501]
 gi|145571442|gb|ABP80548.1| cytidine/deoxycytidylate deaminase family protein [Pseudomonas
           stutzeri A1501]
 gi|327481632|gb|AEA84942.1| cytidine/deoxycytidylate deaminase family protein [Pseudomonas
           stutzeri DSM 4166]
          Length = 156

 Score = 45.4 bits (106), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 28/81 (34%), Positives = 40/81 (49%), Gaps = 3/81 (3%)

Query: 25  PVGAVAV-LNNKIISRAGNRNRELKDVTAHAE-ILAIRMGCRILSQEILPEVDLYVTLEP 82
           P GA+ V  + +++   GN      D+T HAE +L  R   R  + E L    +Y + EP
Sbjct: 26  PFGAILVGPDGEVLLEQGNAYMPDHDMTGHAERVLMTRASTRY-TPEFLSRCTMYTSAEP 84

Query: 83  CTMCAAAISLARIRRLYYGAS 103
           C MCA A     + R+ YG S
Sbjct: 85  CAMCAGAAYWVGLGRVVYGLS 105


>gi|220912199|ref|YP_002487508.1| CMP/dCMP deaminase zinc-binding [Arthrobacter chlorophenolicus A6]
 gi|219859077|gb|ACL39419.1| CMP/dCMP deaminase zinc-binding [Arthrobacter chlorophenolicus A6]
          Length = 161

 Score = 45.4 bits (106), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 32/94 (34%), Positives = 46/94 (48%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           ++  A+  A +   R   P GAV V  +  +    NR     D TAHAE++AIR      
Sbjct: 13  YLQQAVGLATDNVDRGGGPFGAVVVTADGRVFEGVNRVTLDNDPTAHAEVVAIRAAAAGT 72

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
           +   L    LY + EPC +C A+   ARI R+Y+
Sbjct: 73  ANFNLQGAVLYASCEPCPLCLASALWARIDRVYF 106


>gi|322494303|emb|CBZ29602.1| conserved hypothetical protein [Leishmania mexicana
           MHOM/GT/2001/U1103]
          Length = 547

 Score = 45.4 bits (106), Expect = 0.003,   Method: Composition-based stats.
 Identities = 21/56 (37%), Positives = 33/56 (58%)

Query: 74  VDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIY 129
           +DLYVT EPC MCA A+  +RI+R+++   N   GG+      + +A+ +H    Y
Sbjct: 475 LDLYVTHEPCVMCAMALVHSRIQRVFFLFRNAVHGGLGGRYHVHVMASLNHHFSAY 530


>gi|325676856|ref|ZP_08156529.1| guanine deaminase [Rhodococcus equi ATCC 33707]
 gi|325552404|gb|EGD22093.1| guanine deaminase [Rhodococcus equi ATCC 33707]
          Length = 188

 Score = 45.4 bits (106), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 31/111 (27%), Positives = 47/111 (42%), Gaps = 32/111 (28%)

Query: 25  PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL------------------ 66
           P GAV   +  I++R  NR     DVTAH EI AIR   ++L                  
Sbjct: 25  PFGAVIARDGDIVARGQNRVLLTGDVTAHGEIEAIRKAVQVLNAAAPSISREHVDESTLK 84

Query: 67  -------SQEILPE-------VDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
                  S + +PE       +++Y    PC MC +AI  +R+  +Y+ + 
Sbjct: 85  LVPRPEGSPDRVPERARMLMGMEIYTCGAPCPMCMSAIYWSRLDAVYFASD 135


>gi|254368626|ref|ZP_04984642.1| predicted protein [Francisella tularensis subsp. holarctica
          FSC022]
 gi|157121529|gb|EDO65720.1| predicted protein [Francisella tularensis subsp. holarctica
          FSC022]
          Length = 64

 Score = 45.4 bits (106), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 24/54 (44%), Positives = 34/54 (62%)

Query: 7  FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
          FM  A ++A  A    E+P+GAV V +++II +  N+   L D TAHAEIL +R
Sbjct: 11 FMQKAYQQALLAYQAGEVPIGAVLVRDDQIIVQNFNQTIGLNDPTAHAEILVLR 64


>gi|312139695|ref|YP_004007031.1| cytidine/deoxycytidylate deaminase [Rhodococcus equi 103S]
 gi|311889034|emb|CBH48347.1| putative cytidine/deoxycytidylate deaminase [Rhodococcus equi 103S]
          Length = 194

 Score = 45.4 bits (106), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 31/111 (27%), Positives = 47/111 (42%), Gaps = 32/111 (28%)

Query: 25  PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL------------------ 66
           P GAV   +  I++R  NR     DVTAH EI AIR   ++L                  
Sbjct: 31  PFGAVIARDGDIVARGQNRVLLTGDVTAHGEIEAIRKAVQVLNAAAPSISREHVDESTLK 90

Query: 67  -------SQEILPE-------VDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
                  S + +PE       +++Y    PC MC +AI  +R+  +Y+ + 
Sbjct: 91  LVPRPEGSPDRVPERARMLMGMEIYTCGAPCPMCMSAIYWSRLDAVYFASD 141


>gi|302761778|ref|XP_002964311.1| hypothetical protein SELMODRAFT_438667 [Selaginella moellendorffii]
 gi|300168040|gb|EFJ34644.1| hypothetical protein SELMODRAFT_438667 [Selaginella moellendorffii]
          Length = 336

 Score = 45.4 bits (106), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 19/43 (44%), Positives = 27/43 (62%), Gaps = 2/43 (4%)

Query: 75  DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFY 117
           D+Y+T EPC MCA A+   R RR+ +  SNP  G +  G +F+
Sbjct: 271 DIYLTREPCAMCAMAMVHQRFRRVIFRTSNPDNGAL--GGKFF 311


>gi|302768607|ref|XP_002967723.1| hypothetical protein SELMODRAFT_440166 [Selaginella moellendorffii]
 gi|300164461|gb|EFJ31070.1| hypothetical protein SELMODRAFT_440166 [Selaginella moellendorffii]
          Length = 336

 Score = 45.4 bits (106), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 19/43 (44%), Positives = 27/43 (62%), Gaps = 2/43 (4%)

Query: 75  DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFY 117
           D+Y+T EPC MCA A+   R RR+ +  SNP  G +  G +F+
Sbjct: 271 DIYLTREPCAMCAMAMVHQRFRRVIFRTSNPDNGAL--GGKFF 311


>gi|311896167|dbj|BAJ28575.1| putative deaminase [Kitasatospora setae KM-6054]
          Length = 146

 Score = 45.4 bits (106), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 28/95 (29%), Positives = 46/95 (48%), Gaps = 1/95 (1%)

Query: 11  ALEEAQNAALRNEIPVGAV-AVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQE 69
           A+E A  A    + P G++ A  +  +++ A N  R  +D+TAH E+   R   R L   
Sbjct: 13  AVELAARAVESGDAPYGSLLAGADGAVLAEAHNTVRRERDITAHPELKLARWAARELEPA 72

Query: 70  ILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASN 104
                 LY + +PC MCA A+  + + R+ +  S 
Sbjct: 73  EAARTTLYTSCQPCGMCAGALVRSGLGRVVFALST 107


>gi|226324153|ref|ZP_03799671.1| hypothetical protein COPCOM_01931 [Coprococcus comes ATCC 27758]
 gi|225207702|gb|EEG90056.1| hypothetical protein COPCOM_01931 [Coprococcus comes ATCC 27758]
          Length = 67

 Score = 45.1 bits (105), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 24/56 (42%), Positives = 32/56 (57%)

Query: 7  FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
          +M  A+ +A+ A    E+P+G V V   KII R  NR    K+  AHAEI AI+ G
Sbjct: 11 YMKEAIRQAKKAWKIEEVPIGCVIVYQGKIIGRGYNRRTTDKNPLAHAEISAIKKG 66


>gi|258651669|ref|YP_003200825.1| cytosine deaminase [Nakamurella multipartita DSM 44233]
 gi|258554894|gb|ACV77836.1| Cytosine deaminase [Nakamurella multipartita DSM 44233]
          Length = 153

 Score = 45.1 bits (105), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 27/105 (25%), Positives = 47/105 (44%), Gaps = 1/105 (0%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +++ A+  A+       IP+GA  +++  +++   N+  +L     H E   +    R L
Sbjct: 10  YLAAAVRAARQGLAEGGIPIGAALIVDGGVLATGWNKRVQLGSAIRHGETDCLENAGR-L 68

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIE 111
              +     +  TL PC MC  AI L +I R+  G +    GG E
Sbjct: 69  PATVYARSVMVTTLSPCDMCTGAILLYKIPRVIVGENQTFYGGEE 113


>gi|254474243|ref|ZP_05087633.1| Cytidine and deoxycytidylate deaminase zinc-binding region domain
           protein [Pseudovibrio sp. JE062]
 gi|211956617|gb|EEA91827.1| Cytidine and deoxycytidylate deaminase zinc-binding region domain
           protein [Pseudovibrio sp. JE062]
          Length = 171

 Score = 45.1 bits (105), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 29/95 (30%), Positives = 42/95 (44%), Gaps = 3/95 (3%)

Query: 11  ALEEAQNAALRNEIPV---GAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           AL E    +     P    GA+   +  ++++A NR     D ++H E+ AIR  C+   
Sbjct: 17  ALVEYTATSFETPYPTPFGGALYGSDGTLLAQAYNRMVRECDPSSHGELNAIREACKKYQ 76

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGA 102
               P   LY T EPC MC  A     +  L +GA
Sbjct: 77  TRSFPGSILYATSEPCPMCMTATISIGVETLVFGA 111


>gi|317054543|ref|YP_004118568.1| CMP/dCMP deaminase zinc-binding protein [Pantoea sp. At-9b]
 gi|316952538|gb|ADU72012.1| CMP/dCMP deaminase zinc-binding protein [Pantoea sp. At-9b]
          Length = 158

 Score = 45.1 bits (105), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 28/78 (35%), Positives = 35/78 (44%), Gaps = 5/78 (6%)

Query: 49  DVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPK-- 106
           D   HAE    R+     S E L +  LY  +EPC MCA  I  A I R+ +G S  +  
Sbjct: 48  DTVNHAESTLARIAATNFSAEYLWQCTLYTAVEPCCMCAGTIYWANIGRVVFGMSETRLL 107

Query: 107 ---GGGIENGTQFYTLAT 121
              G   EN T   + AT
Sbjct: 108 ACTGSHEENPTMSLSAAT 125


>gi|117620375|ref|YP_856166.1| cytidine/deoxycytidylate deaminase, zinc-binding region [Aeromonas
           hydrophila subsp. hydrophila ATCC 7966]
 gi|117561782|gb|ABK38730.1| cytidine/deoxycytidylate deaminase, zinc-binding region [Aeromonas
           hydrophila subsp. hydrophila ATCC 7966]
          Length = 167

 Score = 45.1 bits (105), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 30/97 (30%), Positives = 48/97 (49%), Gaps = 7/97 (7%)

Query: 12  LEEAQNAALRNEI----PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           LE+A   AL N      P  A+ V +N++++ A N   +  D T HAE+ A+R   ++  
Sbjct: 27  LEQALQLALHNRRQGGRPFAALLVRDNQLVTSAVNAMHQDGDPTRHAELEALRQASQV-- 84

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASN 104
              L    +Y +  PC MC +A+ +  I  +YY   N
Sbjct: 85  -GPLAGAIVYASGHPCPMCLSALVMNGIAAVYYAFDN 120


>gi|260945269|ref|XP_002616932.1| hypothetical protein CLUG_02376 [Clavispora lusitaniae ATCC 42720]
 gi|238848786|gb|EEQ38250.1| hypothetical protein CLUG_02376 [Clavispora lusitaniae ATCC 42720]
          Length = 590

 Score = 45.1 bits (105), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 38/117 (32%), Positives = 55/117 (47%), Gaps = 13/117 (11%)

Query: 7   FMSCALEEAQN-AALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           FM  ALE A+     + +  VGAV VL+ +++S     +REL   T HAE  A+      
Sbjct: 444 FMELALENARKCGETQTQFNVGAVLVLDGQVLSTG--HSRELPGNT-HAEQCALEKYFEK 500

Query: 66  LSQEILPE-VDLYVTLEPCTM-------CAAAISLARIRRLYYGASNPKGGGIENGT 114
             Q  +PE  ++Y T+EPC++       C   I    I+  Y G   P    +EN T
Sbjct: 501 TGQRNVPEGTEIYTTMEPCSLRLSGNLPCVDRIIATNIKTCYVGVVEPD-TFVENNT 556


>gi|254370029|ref|ZP_04986036.1| predicted protein [Francisella tularensis subsp. tularensis
          FSC033]
 gi|151568274|gb|EDN33928.1| predicted protein [Francisella tularensis subsp. tularensis
          FSC033]
          Length = 66

 Score = 45.1 bits (105), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 24/54 (44%), Positives = 34/54 (62%)

Query: 7  FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
          FM  A ++A  A    E+P+GAV V +++II +  N+   L D TAHAEIL +R
Sbjct: 11 FMQKAYQQALLAYQAGEVPIGAVLVRDDQIIVQNFNQTIGLNDPTAHAEILVLR 64


>gi|145299654|ref|YP_001142495.1| cytidine/deoxycytidylate deaminase [Aeromonas salmonicida subsp.
           salmonicida A449]
 gi|142852426|gb|ABO90747.1| cytidine/deoxycytidylate deaminase [Aeromonas salmonicida subsp.
           salmonicida A449]
          Length = 172

 Score = 45.1 bits (105), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 31/97 (31%), Positives = 48/97 (49%), Gaps = 7/97 (7%)

Query: 12  LEEAQNAALRNEI----PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           LE+A   AL+N      P  A+ V N+++++ A N      D T HAE+ A+R   +   
Sbjct: 27  LEQALQLALQNRQRGGRPFAALLVQNDRLVAGAVNAMHLEGDPTRHAELEALRQASQ--- 83

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASN 104
              L    +Y +  PC MC +A+ +  IR +YY   N
Sbjct: 84  SGPLAGAIIYASGHPCPMCLSALVMNGIRAVYYAFDN 120


>gi|290958302|ref|YP_003489484.1| zinc-binding protein [Streptomyces scabiei 87.22]
 gi|260647828|emb|CBG70933.1| putative zinc-binding protein [Streptomyces scabiei 87.22]
          Length = 161

 Score = 45.1 bits (105), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 29/104 (27%), Positives = 45/104 (43%), Gaps = 4/104 (3%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           +++ A+EEA+       IP+GA     +  ++ R  NR  +  D + HAE  A R   R 
Sbjct: 9   WLATAVEEARTGLAEGGIPIGAALYGPDGTLLGRGHNRRVQDGDPSTHAETAAFRAAGR- 67

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109
             Q       +  TL PC  C+  +    I R+  G +    GG
Sbjct: 68  --QRTYRGTTMVTTLSPCWYCSGLVRQFGISRVVVGEATTFHGG 109


>gi|158315851|ref|YP_001508359.1| CMP/dCMP deaminase zinc-binding [Frankia sp. EAN1pec]
 gi|158111256|gb|ABW13453.1| CMP/dCMP deaminase zinc-binding [Frankia sp. EAN1pec]
          Length = 212

 Score = 45.1 bits (105), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 35/106 (33%), Positives = 53/106 (50%), Gaps = 7/106 (6%)

Query: 11  ALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVT----AHAEILAIRMGCRIL 66
           ALE A  + L   + VGA+   +   I   G RN+     +    AHAE+ A  +     
Sbjct: 25  ALEMAWESYLAGGVGVGAILTDSGGRIIGYG-RNQRFASASPRLLAHAEMEA--LAALPP 81

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN 112
            ++   +  LY TL PC MC  A+ +ARI ++ +GA +P   GIE+
Sbjct: 82  GKDRAHDAVLYTTLHPCPMCLGAVVVARIGQVRFGAFDPTWLGIEH 127


>gi|296270519|ref|YP_003653151.1| cytosine deaminase [Thermobispora bispora DSM 43833]
 gi|296093306|gb|ADG89258.1| Cytosine deaminase [Thermobispora bispora DSM 43833]
          Length = 149

 Score = 45.1 bits (105), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 28/95 (29%), Positives = 44/95 (46%), Gaps = 1/95 (1%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  A+E+A+       IP+GA  V + +++    NR  +      H E   +    R L
Sbjct: 6   YMRLAIEQARIGLSEGGIPIGAALVADGEVLGVGRNRRVQEGSAIRHGETDCLENAGR-L 64

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
              +  +  LY TL PC +CA A+ L  I R+  G
Sbjct: 65  PARVYRKSTLYTTLSPCHLCAGAVLLYGIPRVVIG 99


>gi|302419813|ref|XP_003007737.1| conserved hypothetical protein [Verticillium albo-atrum VaMs.102]
 gi|261353388|gb|EEY15816.1| conserved hypothetical protein [Verticillium albo-atrum VaMs.102]
          Length = 405

 Score = 45.1 bits (105), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 21/44 (47%), Positives = 29/44 (65%)

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109
           + + I+ E  LYVT+EPC MCA  +    IR++Y+GA N K GG
Sbjct: 184 VPRSIIRESVLYVTVEPCVMCAGLLRQLGIRKVYFGAVNDKFGG 227



 Score = 43.1 bits (100), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 23/53 (43%), Positives = 32/53 (60%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
           FM  AL+ A+ A   NE PVG V V NNK+I++  N     ++ T HAE +A+
Sbjct: 59  FMDQALDMARLALRTNETPVGCVIVHNNKVIAKGMNATNVTRNGTRHAEFMAV 111


>gi|154343275|ref|XP_001567583.1| hypothetical protein [Leishmania braziliensis MHOM/BR/75/M2904]
 gi|134064915|emb|CAM43024.1| conserved hypothetical protein [Leishmania braziliensis
           MHOM/BR/75/M2904]
          Length = 539

 Score = 45.1 bits (105), Expect = 0.003,   Method: Composition-based stats.
 Identities = 20/56 (35%), Positives = 34/56 (60%)

Query: 74  VDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIY 129
           +D+YVT EPC MCA A+  +RI+R+++   N   GG+      +++A+ +H    Y
Sbjct: 472 LDMYVTHEPCVMCAMALVHSRIQRVFFLFRNAVHGGLGGRYHVHSIASLNHHFRAY 527


>gi|317508050|ref|ZP_07965736.1| cytidine and deoxycytidylate deaminase zinc-binding protein
           [Segniliparus rugosus ATCC BAA-974]
 gi|316253646|gb|EFV13030.1| cytidine and deoxycytidylate deaminase zinc-binding protein
           [Segniliparus rugosus ATCC BAA-974]
          Length = 196

 Score = 45.1 bits (105), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 31/95 (32%), Positives = 49/95 (51%), Gaps = 5/95 (5%)

Query: 12  LEEAQNAALRN-EIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQ 68
           + +A +AA  N  +P G+V V   +N ++++  N N E  +   H E++A+         
Sbjct: 54  MRKAMHAAAGNPRLPFGSVIVRTSDNAMLAKGVNHNTE--NPMWHGEVVALNDYTARHGN 111

Query: 69  EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
               +V LY T EPC MCA AI  A I R+ + +S
Sbjct: 112 ADWRDVTLYTTGEPCAMCAGAIIWAGIPRVVWASS 146


>gi|312081040|ref|XP_003142857.1| hypothetical protein LOAG_07276 [Loa loa]
 gi|307761980|gb|EFO21214.1| hypothetical protein LOAG_07276 [Loa loa]
          Length = 269

 Score = 45.1 bits (105), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 18/38 (47%), Positives = 25/38 (65%)

Query: 75  DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN 112
           D+Y+T EPC MCA A+   R+ R++YG   P GG  E+
Sbjct: 209 DVYLTDEPCAMCAMALVHFRVGRVFYGKRTPSGGVYES 246


>gi|322501868|emb|CBZ36951.1| unnamed protein product [Leishmania donovani BPK282A1]
          Length = 542

 Score = 45.1 bits (105), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 21/56 (37%), Positives = 33/56 (58%)

Query: 74  VDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIY 129
           +DLYVT EPC MCA A+  +RI R+++   N   GG+ +    + +A+ +H    Y
Sbjct: 475 LDLYVTHEPCVMCAMALVHSRIHRVFFLFRNAVHGGLGSRYNLHLMASLNHHFSAY 530


>gi|257455158|ref|ZP_05620396.1| riboflavin biosynthesis protein RibD [Enhydrobacter aerosaccus
           SK60]
 gi|257447491|gb|EEV22496.1| riboflavin biosynthesis protein RibD [Enhydrobacter aerosaccus
           SK60]
          Length = 359

 Score = 45.1 bits (105), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 47/155 (30%), Positives = 68/155 (43%), Gaps = 25/155 (16%)

Query: 7   FMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           +MS A+E A+      R    VG V V +N+II    +     +    HAE+ A+R    
Sbjct: 16  YMSRAIELAKKGRFTTRPNPSVGCVIVKDNQIIGEGFH----YQAGQPHAEVFALRQAYE 71

Query: 65  ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP----KGGGIENGT 114
             ++ +   +  YVTLEPC+       CA A+  A I R+     +P     GGGI    
Sbjct: 72  RDAKHLQGAI-AYVTLEPCSHHGRTPPCADALIQAGISRVVIAVVDPNPKVDGGGIAKLQ 130

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
           Q           E+  GI EQ + Q+ + FFK  R
Sbjct: 131 QA--------GIEVITGICEQAAYQLNEGFFKVMR 157


>gi|149181584|ref|ZP_01860078.1| cytidine/deoxycytidylate deaminase/nudix/methyltransferase domains
           protein [Bacillus sp. SG-1]
 gi|148850698|gb|EDL64854.1| cytidine/deoxycytidylate deaminase/nudix/methyltransferase domains
           protein [Bacillus sp. SG-1]
          Length = 217

 Score = 45.1 bits (105), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 28/116 (24%), Positives = 52/116 (44%), Gaps = 11/116 (9%)

Query: 12  LEEAQNAALRNEIPVGA---------VAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
            E+A N+      P+GA         +++  NK+  +     +   +  AHAEI AI   
Sbjct: 13  FEQAWNSYCSGSFPIGAAITDENGDVISIGRNKVYEKVIEEGQVCNNKIAHAEINAILKI 72

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIE--NGTQF 116
             + +     +  +Y T+EPC +C  AI ++ I+ +++ A +   G     NG  +
Sbjct: 73  NNLETNTNRKKYSIYSTMEPCALCFGAIVMSSIKNVHFAAGDGLAGATNLINGNDY 128


>gi|51246637|ref|YP_066521.1| riboflavin biosynthesis protein (RibD) [Desulfotalea psychrophila
           LSv54]
 gi|50877674|emb|CAG37514.1| probable riboflavin biosynthesis protein (RibD) [Desulfotalea
           psychrophila LSv54]
          Length = 401

 Score = 45.1 bits (105), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 44/150 (29%), Positives = 67/150 (44%), Gaps = 23/150 (15%)

Query: 7   FMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
           +M  AL EA+    R   P   VGA+ V +  ++ R  ++    K  T HAE+ A+R   
Sbjct: 42  YMLLALAEARRGQGRTS-PNPCVGAIIVGDGSVVGRGYHK----KAGTPHAEVHALRD-- 94

Query: 64  RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFY 117
              + E       YVTLEPC+       C  A++ A + R+  G ++P       G Q+ 
Sbjct: 95  ---AGEKAAGATAYVTLEPCSHTGRTPPCCVALAKAGVLRVVVGMTDPNPLVNGRGVQYL 151

Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
                 H  E+  GI E   R+I + F K+
Sbjct: 152 R----DHGIEVSTGICEADCREINRPFIKK 177


>gi|146096702|ref|XP_001467899.1| hypothetical protein [Leishmania infantum JPCM5]
 gi|134072265|emb|CAM70970.1| conserved hypothetical protein [Leishmania infantum JPCM5]
          Length = 542

 Score = 45.1 bits (105), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 21/56 (37%), Positives = 33/56 (58%)

Query: 74  VDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIY 129
           +DLYVT EPC MCA A+  +RI R+++   N   GG+ +    + +A+ +H    Y
Sbjct: 475 LDLYVTHEPCVMCAMALVHSRIHRVFFLFRNAVHGGLGSRYNLHLMASLNHHFSAY 530


>gi|119718363|ref|YP_925328.1| cytosine deaminase [Nocardioides sp. JS614]
 gi|119539024|gb|ABL83641.1| Cytosine deaminase [Nocardioides sp. JS614]
          Length = 154

 Score = 45.1 bits (105), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 31/105 (29%), Positives = 46/105 (43%), Gaps = 1/105 (0%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
            +  A+EEA+       IP+GAV + + +++    NR  +L     H E   +    R L
Sbjct: 6   MLVLAVEEARRGLAEGGIPIGAVLIHDGEVLGGGHNRRVQLGSAIRHGETDCLENIGR-L 64

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIE 111
              +     +  TL PC MC  AI L  I R+  G +    GG E
Sbjct: 65  PASVYARSTMVTTLSPCDMCTGAILLYGIPRVVVGENRNFLGGEE 109


>gi|38677840|emb|CAE82258.1| putative cytosine deaminase [Candida albicans]
          Length = 150

 Score = 45.1 bits (105), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 39/152 (25%), Positives = 66/152 (43%), Gaps = 22/152 (14%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELK-DVTAHAEILAIR 60
           KKG   +  AL++A+ +     IP+G+  + ++  +   G+  R  K     H E+ A+ 
Sbjct: 6   KKG---LQIALDQAKKSYSEGGIPIGSCIISSDGTVLGQGHNERIQKHSAILHGEMSALE 62

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG----IENGTQF 116
              R L  +   +  +Y TL PC+MC  AI L   +R+  G +    G     IENG + 
Sbjct: 63  NAGR-LPGKTYKDCTIYTTLSPCSMCTGAILLYGFKRVVMGENVNFLGNEKLLIENGVEV 121

Query: 117 YTLATCHHSPEIYPGISEQRSRQIIQDFFKER 148
             L             ++Q    ++  F KE+
Sbjct: 122 VNL-------------NDQECIDLMAKFIKEK 140


>gi|224456420|ref|ZP_03664893.1| zinc-binding domain-containing protein [Francisella tularensis
          subsp. tularensis MA00-2987]
 gi|254874186|ref|ZP_05246896.1| zinc-binding domain-containing protein [Francisella tularensis
          subsp. tularensis MA00-2987]
 gi|254840185|gb|EET18621.1| zinc-binding domain-containing protein [Francisella tularensis
          subsp. tularensis MA00-2987]
          Length = 72

 Score = 44.7 bits (104), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 24/54 (44%), Positives = 34/54 (62%)

Query: 7  FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
          FM  A ++A  A    E+P+GAV V +++II +  N+   L D TAHAEIL +R
Sbjct: 11 FMQKAYQQALLAYQAGEVPIGAVLVRDDQIIVQNFNQTIGLNDPTAHAEILVLR 64


>gi|313675594|ref|YP_004053590.1| riboflavin biosynthesis protein ribd [Marivirga tractuosa DSM 4126]
 gi|312942292|gb|ADR21482.1| riboflavin biosynthesis protein RibD [Marivirga tractuosa DSM 4126]
          Length = 359

 Score = 44.7 bits (104), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 44/153 (28%), Positives = 70/153 (45%), Gaps = 21/153 (13%)

Query: 2   KKGNVFMSCALEEA---QNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           K+  +FM  AL+ A   +  A  N + VG V VL+ K+I    ++    K    HAE++A
Sbjct: 12  KQDELFMQRALQLAGYGKATASPNPM-VGCVIVLDGKVIGEGWHK----KAGEPHAEVMA 66

Query: 59  IRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIEN 112
           IR    + + E+L     YVTLEPC        CA  +   +++++  GA +P       
Sbjct: 67  IR---SVENPELLKSSTAYVTLEPCAHYGKTPPCAELLVEKQLKKVVIGAVDPNPLVAGK 123

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
           G Q    A      E+   + EQ   ++ + FF
Sbjct: 124 GIQILKKAGI----EVESAVLEQECLEVNKAFF 152


>gi|291532792|emb|CBL05905.1| Cytosine/adenosine deaminases [Megamonas hypermegale ART12/1]
          Length = 158

 Score = 44.7 bits (104), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 27/98 (27%), Positives = 44/98 (44%), Gaps = 1/98 (1%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           ++  A+E ++ +      P GA+ V     I+    N      + + HAE   +    + 
Sbjct: 6   YLRKAIEVSKKSREHGNTPFGAILVDGEGNILLEQENIEITESNCSGHAETSLMIKASKK 65

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
            S++ L    LY T EPC MCA AI    + ++ YG S
Sbjct: 66  YSKDFLWNCTLYSTAEPCAMCAGAIYWGNVGKVVYGIS 103


>gi|78222833|ref|YP_384580.1| 5-amino-6-(5-phosphoribosylamino)uracil
           reductase/diaminohydroxyphosphoribosylaminopyrimidine
           deaminase [Geobacter metallireducens GS-15]
 gi|78194088|gb|ABB31855.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Geobacter
           metallireducens GS-15]
          Length = 370

 Score = 44.7 bits (104), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 38/127 (29%), Positives = 58/127 (45%), Gaps = 19/127 (14%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85
           VG V V +  I+    +R    K  T HAE+ A+R      + E+    D+YVTLEPC+ 
Sbjct: 29  VGCVIVRDGAIVGEGWHR----KAGTPHAEVHALRQ-----AGELARGADVYVTLEPCSH 79

Query: 86  ------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139
                 CA A+  A + R++ G  +P       G +   +A      E+  GI E   R+
Sbjct: 80  FGKTPPCADALVEAGVGRVFVGMVDPNPKVSGRGIERLRVAGI----EVVTGIREAECRR 135

Query: 140 IIQDFFK 146
           + + F K
Sbjct: 136 LNEPFVK 142


>gi|154316392|ref|XP_001557517.1| hypothetical protein BC1G_04127 [Botryotinia fuckeliana B05.10]
 gi|150845927|gb|EDN21120.1| hypothetical protein BC1G_04127 [Botryotinia fuckeliana B05.10]
          Length = 393

 Score = 44.7 bits (104), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 18/38 (47%), Positives = 26/38 (68%)

Query: 73  EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI 110
           E++LY+T EPC MC+ AI  +R  R+ +G   PK GG+
Sbjct: 307 ELELYITHEPCVMCSMAIVHSRFGRVIFGQRMPKTGGL 344


>gi|315224801|ref|ZP_07866622.1| riboflavin biosynthesis protein RibD [Capnocytophaga ochracea
           F0287]
 gi|314945204|gb|EFS97232.1| riboflavin biosynthesis protein RibD [Capnocytophaga ochracea
           F0287]
          Length = 331

 Score = 44.7 bits (104), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 37/126 (29%), Positives = 58/126 (46%), Gaps = 17/126 (13%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85
           VG+V V   +II    ++    K   AHAE+ AI     +  + +LP+  +YV+LEPC  
Sbjct: 33  VGSVIVYEGRIIGEGWHQ----KAGEAHAEVRAI---TSVKDKSLLPKSTIYVSLEPCCH 85

Query: 86  ------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139
                 CA  I   +I R+  G ++P       G +    A C    E+  G+ E   R+
Sbjct: 86  FGKTPPCADLIIAHKIGRVVIGTTDPFAKVHGKGIEKLRNAGC----EVTVGVCEAECRE 141

Query: 140 IIQDFF 145
           + + FF
Sbjct: 142 LNKRFF 147


>gi|150865735|ref|XP_001385070.2| cytosine deaminase [Scheffersomyces stipitis CBS 6054]
 gi|149386991|gb|ABN67041.2| cytosine deaminase [Scheffersomyces stipitis CBS 6054]
          Length = 150

 Score = 44.7 bits (104), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 30/101 (29%), Positives = 45/101 (44%), Gaps = 5/101 (4%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKD-VTAHAEILAIR 60
           KKG   M  ALEEA+       +P+G   +  +  +   G+  R  KD    H E+  + 
Sbjct: 6   KKG---MQIALEEAKKGYEEGGVPIGGALISEDGTVLGRGHNMRFQKDSAILHGEMSVLE 62

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
              R L   +     +Y TL PC MC+ A  +  I+R+  G
Sbjct: 63  NAGR-LKGSVYKNCTMYTTLSPCHMCSGACLMYGIKRVVLG 102


>gi|256819357|ref|YP_003140636.1| riboflavin biosynthesis protein RibD [Capnocytophaga ochracea DSM
           7271]
 gi|256580940|gb|ACU92075.1| riboflavin biosynthesis protein RibD [Capnocytophaga ochracea DSM
           7271]
          Length = 331

 Score = 44.7 bits (104), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 37/126 (29%), Positives = 58/126 (46%), Gaps = 17/126 (13%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85
           VG+V V   +II    ++    K   AHAE+ AI     +  + +LP+  +YV+LEPC  
Sbjct: 33  VGSVIVYEGRIIGEGWHQ----KAGEAHAEVRAI---TSVKDKSLLPKSTIYVSLEPCCH 85

Query: 86  ------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139
                 CA  I   +I R+  G ++P       G +    A C    E+  G+ E   R+
Sbjct: 86  FGKTPPCADLIIAHKIGRVVIGTTDPFAKVHGKGIEKLRNAGC----EVIVGVCEAECRE 141

Query: 140 IIQDFF 145
           + + FF
Sbjct: 142 LNKRFF 147


>gi|254567633|ref|XP_002490927.1| Cytosine deaminase, zinc metalloenzyme that catalyzes the
           hydrolytic deamination of cytosine to urac [Pichia
           pastoris GS115]
 gi|238030724|emb|CAY68647.1| Cytosine deaminase, zinc metalloenzyme that catalyzes the
           hydrolytic deamination of cytosine to urac [Pichia
           pastoris GS115]
 gi|328352537|emb|CCA38936.1| cytosine deaminase [Pichia pastoris CBS 7435]
          Length = 150

 Score = 44.7 bits (104), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 30/92 (32%), Positives = 44/92 (47%), Gaps = 2/92 (2%)

Query: 11  ALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTA-HAEILAIRMGCRILSQE 69
           AL+EAQ       IP+GA  V  +  +   G+  R  K  +  HAE+ A+    R L  +
Sbjct: 12  ALKEAQKGYEDGGIPIGAALVSEDGTVLGVGHNLRIQKGSSVFHAEMSALENAGR-LPGK 70

Query: 70  ILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
                 +Y TL PC MC+ A  +  I+R+  G
Sbjct: 71  TYKNCTMYTTLSPCHMCSGACLMYGIKRVVLG 102


>gi|291521186|emb|CBK79479.1| Cytosine/adenosine deaminases [Coprococcus catus GD/7]
          Length = 159

 Score = 44.7 bits (104), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 30/105 (28%), Positives = 45/105 (42%), Gaps = 3/105 (2%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLN--NKIISRAGNRNRELKDVTAHAEILA 58
           M+    ++  A+E +  +      P  A+ V    N I+ +  N   E K  T HAE   
Sbjct: 1   MQSHEAYLKRAIELSVKSRESGNTPFAALLVDKDGNIIMEQMNNEITEHK-CTGHAETQL 59

Query: 59  IRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
           +       S+E L +  LY T EPC MC+ AI    I  + Y  +
Sbjct: 60  VERASHAYSKEFLWDCTLYTTAEPCAMCSGAIYWGNIGHVVYAMT 104


>gi|313212488|emb|CBY36459.1| unnamed protein product [Oikopleura dioica]
          Length = 123

 Score = 44.7 bits (104), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 22/71 (30%), Positives = 38/71 (53%)

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           + + IL  +++Y+  EPC MC+ A+S +RI+RL+Y       G        +TL   +H 
Sbjct: 45  MGEYILTGLEVYMYREPCLMCSMALSHSRIKRLFYLKKCGTDGSCGTRESIHTLPALNHR 104

Query: 126 PEIYPGISEQR 136
            +++ G  E R
Sbjct: 105 FQVFYGGFEDR 115


>gi|157865399|ref|XP_001681407.1| deaminase [Leishmania major strain Friedlin]
 gi|68124703|emb|CAJ02761.1| putative deaminase [Leishmania major strain Friedlin]
          Length = 281

 Score = 44.7 bits (104), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 21/44 (47%), Positives = 28/44 (63%), Gaps = 2/44 (4%)

Query: 71  LPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           L +  LYVT+EPC MC A +   RI  +++G  NP+ GG  NGT
Sbjct: 149 LADYVLYVTVEPCVMCGAMLLYNRIAHVFFGCRNPRFGG--NGT 190


>gi|254823485|ref|ZP_05228486.1| CMP/dCMP deaminase, zinc-binding protein [Mycobacterium
           intracellulare ATCC 13950]
          Length = 143

 Score = 44.7 bits (104), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 37/141 (26%), Positives = 55/141 (39%), Gaps = 13/141 (9%)

Query: 8   MSCALEEAQNAALRNEIPVG-AVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +  A EEA++      IP+G A+   +  ++ R  NR  +  D + HAE+ A R   R  
Sbjct: 2   LDVAFEEARSGLAEGGIPIGAALFTADGVLLGRGRNRRVQQGDPSLHAEVDAFRAAGR-- 59

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
            Q       +  TL PC  C+  +    I  L  G S    GG E   Q     T     
Sbjct: 60  -QRDYRSTVMVTTLSPCWYCSGLVRQFNIGALVVGESRTFTGGHEWLAQHGVTVTV---- 114

Query: 127 EIYPGISEQRSRQIIQDFFKE 147
                + + R  Q++  F  E
Sbjct: 115 -----VDDPRCTQMMSAFIAE 130


>gi|158286349|ref|XP_308696.4| AGAP007066-PA [Anopheles gambiae str. PEST]
 gi|157020426|gb|EAA03932.5| AGAP007066-PA [Anopheles gambiae str. PEST]
          Length = 380

 Score = 44.7 bits (104), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 17/55 (30%), Positives = 32/55 (58%)

Query: 75  DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIY 129
           D+Y+T EPC MCA A+  +R+RR+++    P  G +    + + +   +H  E++
Sbjct: 323 DVYLTHEPCIMCAMALVHSRVRRVFFHRPTPGRGALGTLMKLHAVKELNHHYEVF 377


>gi|309359910|emb|CAP32039.2| hypothetical protein CBG_13218 [Caenorhabditis briggsae AF16]
          Length = 293

 Score = 44.7 bits (104), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 19/55 (34%), Positives = 33/55 (60%)

Query: 75  DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIY 129
           D+++  EPC MC+ A+   RI+RL+Y  S+  G   ++G Q +   + +H  E+Y
Sbjct: 212 DVFLLNEPCAMCSMALVHFRIKRLFYVISSRNGVLKDDGWQLHLEPSINHHYEVY 266


>gi|300855387|ref|YP_003780371.1| riboflavin biosynthesis protein RibD [Clostridium ljungdahlii DSM
           13528]
 gi|300435502|gb|ADK15269.1| riboflavin biosynthesis protein RibD [Clostridium ljungdahlii DSM
           13528]
          Length = 372

 Score = 44.7 bits (104), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 33/86 (38%), Positives = 45/86 (52%), Gaps = 15/86 (17%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85
           VGAV V N KII +  +R        AHAE+ A+R      + +     DLYVTLEPC+ 
Sbjct: 31  VGAVIVKNGKIIGKGYHRFFG----GAHAEVYALRE-----AGDNAQGADLYVTLEPCSH 81

Query: 86  ------CAAAISLARIRRLYYGASNP 105
                 CA AI  A I+++  G+ +P
Sbjct: 82  YGKTPPCAKAIVEAGIKKVVIGSVDP 107


>gi|154686573|ref|YP_001421734.1| hypothetical protein RBAM_021420 [Bacillus amyloliquefaciens FZB42]
 gi|154352424|gb|ABS74503.1| RibD [Bacillus amyloliquefaciens FZB42]
          Length = 371

 Score = 44.7 bits (104), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 35/107 (32%), Positives = 52/107 (48%), Gaps = 17/107 (15%)

Query: 7   FMSCALEEAQ--NAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           +M+ A+E A+      ++   VGAV V N +I+    +    L+   AHAE+ AI M  R
Sbjct: 5   YMNTAIELARRGEGQTQSNPLVGAVVVKNGQIVGMGAH----LQYGEAHAEVHAIHMAGR 60

Query: 65  ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP 105
                     DLYVTLEPC+       CA  I  + I+R++    +P
Sbjct: 61  HAKG-----ADLYVTLEPCSHYGKTPPCAELIIKSGIKRVFIAVKDP 102


>gi|325295467|ref|YP_004281981.1| riboflavin biosynthesis protein RibD [Desulfurobacterium
           thermolithotrophum DSM 11699]
 gi|325065915|gb|ADY73922.1| riboflavin biosynthesis protein RibD [Desulfurobacterium
           thermolithotrophum DSM 11699]
          Length = 362

 Score = 44.3 bits (103), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 50/164 (30%), Positives = 71/164 (43%), Gaps = 33/164 (20%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57
           M +   FM  A+ EA  A  R  +P   VGAV V + K+I+   +    L     HAE +
Sbjct: 1   MTQDEKFMKLAISEAYKAKGRT-LPNPAVGAVIVKDGKVIATGYHERAGL----PHAESV 55

Query: 58  AIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKG---G 108
           AI       + E      LYVTLEPC        C+  I  A I+R+  G  +P     G
Sbjct: 56  AISK-----AGEKAKGATLYVTLEPCNHYGKTPPCSEKIIKAGIKRVVVGIRDPNPVARG 110

Query: 109 GIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF---FKERR 149
           G+E           +   E+  G+ E+   ++I DF    KE+R
Sbjct: 111 GVEK--------LKNAGIEVKVGVLEKECFELIDDFIVNLKEKR 146


>gi|77919046|ref|YP_356861.1| riboflavin biosynthesis protein RibD [Pelobacter carbinolicus DSM
           2380]
 gi|77545129|gb|ABA88691.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase /
           diaminohydroxyphosphoribosylaminopyrimidine deaminase
           [Pelobacter carbinolicus DSM 2380]
          Length = 371

 Score = 44.3 bits (103), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 50/153 (32%), Positives = 68/153 (44%), Gaps = 31/153 (20%)

Query: 7   FMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR-MGC 63
           FM  A++ A+      R    VGA+ V + +I+     R    K    HAEI A+R  G 
Sbjct: 8   FMRQAIDLARRGEGRTRPNPAVGALIVKDGEIV----GRGFHPKAGQPHAEIYALREAGD 63

Query: 64  RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPK----GGGIENG 113
           R          D+YVTLEPC+       CA AI  A + R+Y G  +P     GGGI   
Sbjct: 64  RARG------ADMYVTLEPCSHHGRTGPCADAIIEAGLARVYVGTLDPNPQVAGGGIRK- 116

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
            Q   +       E++ G+ E   R+II  F K
Sbjct: 117 LQGAGI-------EVHCGVLENLCRRIIAPFAK 142


>gi|30021491|ref|NP_833122.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Bacillus
           cereus ATCC 14579]
 gi|29897046|gb|AAP10323.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase [Bacillus
           cereus ATCC 14579]
          Length = 302

 Score = 44.3 bits (103), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 45/156 (28%), Positives = 74/156 (47%), Gaps = 25/156 (16%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP----VGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56
           M +  ++M  ALE A+  A++ +      VG+V V +N+I+    +    +K    HAEI
Sbjct: 1   MLEHELYMKLALENAK--AMKGQTTPNPLVGSVIVNDNRIVGVGAH----MKAGEPHAEI 54

Query: 57  LAIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGI 110
            AIRM     + E +    +YVTLEPC+       CA AI  A I+++     +P     
Sbjct: 55  HAIRM-----AGEQVRGATIYVTLEPCSHHGRTGPCAEAIVQAGIKKVVVATLDPNPLVS 109

Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
             G +    A      E+  G+ E+ S+++ + F K
Sbjct: 110 GRGIKILQDAGI----EVLVGVCEEESKKMNEVFNK 141


>gi|227893613|ref|ZP_04011418.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Lactobacillus ultunensis DSM 16047]
 gi|227864473|gb|EEJ71894.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Lactobacillus ultunensis DSM 16047]
          Length = 352

 Score = 44.3 bits (103), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 39/123 (31%), Positives = 58/123 (47%), Gaps = 22/123 (17%)

Query: 1   MKKGNVFMSCALEEAQNA---ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57
           M+K   +M+ AL+EA+       +N + VGAV V NN++++        +     HAE  
Sbjct: 1   MEKDQYYMNLALQEAKKGRFQTWKNPM-VGAVIVKNNQVLATG----HHIHYGQNHAE-- 53

Query: 58  AIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPK----G 107
             R     L+ E L    LYVTLEPC        C+  I  ++I+R+  G  +P     G
Sbjct: 54  --RDAISKLTPEQLFNSTLYVTLEPCNHYGKQPPCSDLIVKSKIKRVVIGQVDPHKLVTG 111

Query: 108 GGI 110
            GI
Sbjct: 112 KGI 114


>gi|260778186|ref|ZP_05887079.1| putative deaminase [Vibrio coralliilyticus ATCC BAA-450]
 gi|260606199|gb|EEX32484.1| putative deaminase [Vibrio coralliilyticus ATCC BAA-450]
          Length = 159

 Score = 44.3 bits (103), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 31/82 (37%), Positives = 40/82 (48%), Gaps = 3/82 (3%)

Query: 24  IPVGAVAVLNNK--IISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81
           IP  A  V+N+K  ++ +  NR  E  D TAHAE+ AIR  CR      L  + L  + E
Sbjct: 29  IPFTAY-VVNSKGEVLGKGVNRVLENHDPTAHAEVEAIRDACRNTKSSHLRGLTLLASGE 87

Query: 82  PCTMCAAAISLARIRRLYYGAS 103
           PC MC      A I  + Y A 
Sbjct: 88  PCAMCYLNALFAGISEVVYVAD 109


>gi|322489137|emb|CBZ24389.1| putative deaminase [Leishmania mexicana MHOM/GT/2001/U1103]
          Length = 281

 Score = 44.3 bits (103), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 21/44 (47%), Positives = 28/44 (63%), Gaps = 2/44 (4%)

Query: 71  LPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           L +  LYVT+EPC MC A +   RI  +++G  NP+ GG  NGT
Sbjct: 149 LADYVLYVTVEPCVMCGAMLLYNRIAHVFFGCRNPRFGG--NGT 190


>gi|289807927|ref|ZP_06538556.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp.
           enterica serovar Typhi str. AG3]
          Length = 48

 Score = 44.3 bits (103), Expect = 0.005,   Method: Composition-based stats.
 Identities = 19/34 (55%), Positives = 24/34 (70%)

Query: 76  LYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109
           LYVTLEPC MCA A+  +RI R+ +GA + K G 
Sbjct: 3   LYVTLEPCVMCAGAMVHSRIGRVVFGARDAKTGA 36


>gi|332295838|ref|YP_004437761.1| riboflavin biosynthesis protein RibD [Thermodesulfobium narugense
           DSM 14796]
 gi|332178941|gb|AEE14630.1| riboflavin biosynthesis protein RibD [Thermodesulfobium narugense
           DSM 14796]
          Length = 372

 Score = 44.3 bits (103), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 47/149 (31%), Positives = 65/149 (43%), Gaps = 23/149 (15%)

Query: 7   FMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
           FM  AL+ A N       P   VG + V + KIIS+  +R         HAE  A++   
Sbjct: 16  FMKKALDLALNGKYYTS-PNPMVGCIVVKDKKIISQGYHRAYG----EPHAEANALKPKY 70

Query: 64  RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFY 117
              S       DLYVTLEPC        C + I  + I+R++    +P      NG    
Sbjct: 71  IDFSG-----ADLYVTLEPCLHYGKTPSCTSKIISSGIKRVFIATLDPNPK--MNGKSVE 123

Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDFFK 146
            L   +   E+Y GI E+ +R I + FFK
Sbjct: 124 ILK--YAGIEVYTGILEKEARFINRHFFK 150


>gi|313229170|emb|CBY23755.1| unnamed protein product [Oikopleura dioica]
          Length = 123

 Score = 44.3 bits (103), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 22/71 (30%), Positives = 38/71 (53%)

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           + + IL  +++Y+  EPC MC+ A+S +RI+RL+Y       G        +TL   +H 
Sbjct: 45  MGEYILTGLEVYMYREPCLMCSMALSHSRIKRLFYLKKCGTDGSCGTRESIHTLPALNHR 104

Query: 126 PEIYPGISEQR 136
            +++ G  E R
Sbjct: 105 FQVFYGGFEDR 115


>gi|159901995|gb|ABX10725.1| cytidine and deoxycytidylate deaminase family protein [uncultured
           planctomycete 13FN]
          Length = 164

 Score = 44.3 bits (103), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 29/81 (35%), Positives = 39/81 (48%), Gaps = 1/81 (1%)

Query: 25  PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84
           P GAV V +   +  A   NR  K+ T HAEI  I         +    + LY T EPC 
Sbjct: 24  PFGAVIVSSASEVIVAEGVNRSSKNPTLHAEIDVINNYAASGGTD-WHRLTLYTTAEPCP 82

Query: 85  MCAAAISLARIRRLYYGASNP 105
           MC +AI  + ++ + YG S P
Sbjct: 83  MCMSAILWSGVKSIVYGTSIP 103


>gi|297191042|ref|ZP_06908440.1| cytidine/deoxycytidine deaminase [Streptomyces pristinaespiralis
           ATCC 25486]
 gi|197721517|gb|EDY65425.1| cytidine/deoxycytidine deaminase [Streptomyces pristinaespiralis
           ATCC 25486]
          Length = 158

 Score = 44.3 bits (103), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 29/109 (26%), Positives = 49/109 (44%), Gaps = 8/109 (7%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           F+  A+  A +A    + P G++ V  +   ++ A N  +   D++AH E+   R   R 
Sbjct: 24  FLRRAVAIAAHAVTLGDAPYGSLLVGPDGATLAEAHNTVQRDNDISAHPELKLARWAARE 83

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS-------NPKG 107
           L ++      LY + +PC MC   I  + + R+ Y  S       NP G
Sbjct: 84  LDKDTASGTTLYTSCQPCGMCTGGIVRSGLGRVVYALSTEQLIELNPAG 132


>gi|326502140|dbj|BAK06562.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 418

 Score = 44.3 bits (103), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 16/36 (44%), Positives = 23/36 (63%)

Query: 75  DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI 110
           D+Y+  EPCTMCA A+   R +R++Y   NP  G +
Sbjct: 338 DIYLVWEPCTMCAMALVHQRFKRVFYAFPNPVTGAL 373


>gi|119962643|ref|YP_947330.1| guanine deaminase [Arthrobacter aurescens TC1]
 gi|119949502|gb|ABM08413.1| guanine deaminase [Arthrobacter aurescens TC1]
          Length = 160

 Score = 44.3 bits (103), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 29/79 (36%), Positives = 39/79 (49%)

Query: 25  PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84
           P GAV V  +  +    NR     D TAHAE++AIR       +  L    LY + EPC 
Sbjct: 30  PFGAVVVTADGTVHEGVNRVTRDHDPTAHAEVVAIRRAAAASKRFDLTGSVLYASCEPCP 89

Query: 85  MCAAAISLARIRRLYYGAS 103
           +C +A   ARI  +Y+ A 
Sbjct: 90  LCLSATLWARIGHVYFAAD 108


>gi|302559168|ref|ZP_07311510.1| cytosine deaminase [Streptomyces griseoflavus Tu4000]
 gi|302476786|gb|EFL39879.1| cytosine deaminase [Streptomyces griseoflavus Tu4000]
          Length = 152

 Score = 44.3 bits (103), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 30/105 (28%), Positives = 45/105 (42%), Gaps = 4/105 (3%)

Query: 6   VFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
            +++ AL EA+       IP+GA     +  ++ R  NR  +  D +AHAE  A R   R
Sbjct: 11  AWLATALAEARAGGDEGGIPIGAALYGADGTLLGRGHNRRVQDGDPSAHAETAAFRAAGR 70

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109
              Q       +  TL PC  C+  +    I R+  G +    GG
Sbjct: 71  ---QRSYGGTTMVTTLSPCWYCSGLVRQFGISRVVIGEAATFHGG 112


>gi|91776267|ref|YP_546023.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Methylobacillus flagellatus KT]
 gi|91710254|gb|ABE50182.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Methylobacillus flagellatus KT]
          Length = 377

 Score = 44.3 bits (103), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 43/148 (29%), Positives = 68/148 (45%), Gaps = 23/148 (15%)

Query: 7   FMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
           +M+ AL EA    L +  P   VG V V + K++ R  +    L+    HAE+ A+RM  
Sbjct: 19  YMNLALREAARG-LYSTSPNPRVGCVIVKDGKVVGRGAH----LRAGEPHAEVHALRMAG 73

Query: 64  RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFY 117
              +         YVTLEPC+       CA A+  A +RR+     +P    + +G+   
Sbjct: 74  GQAAGADA-----YVTLEPCSHFGRTPPCADALVKAGVRRVVAAMQDPN--PLVSGSGLK 126

Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDFF 145
            L+T  H  E+  G+ E  +R++   F 
Sbjct: 127 RLST--HGIEVAYGLLEHEARELNAGFI 152


>gi|58265046|ref|XP_569679.1| hypothetical protein CNC04270 [Cryptococcus neoformans var.
           neoformans JEC21]
 gi|57225911|gb|AAW42372.1| hypothetical protein CNC04270 [Cryptococcus neoformans var.
           neoformans JEC21]
          Length = 647

 Score = 44.3 bits (103), Expect = 0.006,   Method: Composition-based stats.
 Identities = 20/60 (33%), Positives = 33/60 (55%), Gaps = 2/60 (3%)

Query: 70  ILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIE--NGTQFYTLATCHHSPE 127
           +L  + L+++ EPC MCA A+  +R+R ++Y     KGGG E   G ++   +  H   E
Sbjct: 537 LLTSLSLFISHEPCVMCAMALLHSRVREVFYVFPRKKGGGFEYNEGNEYGEGSPVHQHDE 596


>gi|124265967|ref|YP_001019971.1| hypothetical protein Mpe_A0774 [Methylibium petroleiphilum PM1]
 gi|124258742|gb|ABM93736.1| conserved hypothetical protein [Methylibium petroleiphilum PM1]
          Length = 166

 Score = 44.3 bits (103), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 28/81 (34%), Positives = 37/81 (45%), Gaps = 7/81 (8%)

Query: 25  PVGAV--AVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEP 82
           P GA+  A  +  +++  GN      D   HAE   +R      + E L +  L  T EP
Sbjct: 35  PFGALLLAPDHQTVLAEQGN-----IDTVQHAEATLLRTAAAKHAPEFLWDCTLVTTFEP 89

Query: 83  CTMCAAAISLARIRRLYYGAS 103
           C MCA     A I R+ YGAS
Sbjct: 90  CAMCAGTAYWANIGRVVYGAS 110


>gi|226508300|ref|NP_001147072.1| hydrolase/ zinc ion binding protein [Zea mays]
 gi|195607072|gb|ACG25366.1| hydrolase/ zinc ion binding protein [Zea mays]
          Length = 412

 Score = 44.3 bits (103), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 16/36 (44%), Positives = 23/36 (63%)

Query: 75  DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI 110
           D+Y+  EPCTMCA A+   R +R++Y   NP  G +
Sbjct: 339 DIYLVWEPCTMCAMALVHHRFKRVFYAFPNPVAGAL 374


>gi|146079218|ref|XP_001463726.1| deaminase [Leishmania infantum JPCM5]
 gi|134067813|emb|CAM66093.1| putative deaminase [Leishmania infantum JPCM5]
 gi|322497125|emb|CBZ32196.1| unnamed protein product [Leishmania donovani BPK282A1]
          Length = 281

 Score = 44.3 bits (103), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 21/44 (47%), Positives = 28/44 (63%), Gaps = 2/44 (4%)

Query: 71  LPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           L +  LYVT+EPC MC A +   RI  +++G  NP+ GG  NGT
Sbjct: 149 LADYVLYVTVEPCVMCGAMLLYNRIAHVFFGCRNPRFGG--NGT 190


>gi|134109371|ref|XP_776800.1| hypothetical protein CNBC2910 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|50259480|gb|EAL22153.1| hypothetical protein CNBC2910 [Cryptococcus neoformans var.
           neoformans B-3501A]
          Length = 647

 Score = 44.3 bits (103), Expect = 0.006,   Method: Composition-based stats.
 Identities = 20/60 (33%), Positives = 33/60 (55%), Gaps = 2/60 (3%)

Query: 70  ILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIE--NGTQFYTLATCHHSPE 127
           +L  + L+++ EPC MCA A+  +R+R ++Y     KGGG E   G ++   +  H   E
Sbjct: 537 LLTSLSLFISHEPCVMCAMALLHSRVREVFYVFPRKKGGGFEYNEGNEYGEGSPVHQHDE 596


>gi|312134474|ref|YP_004001812.1| riboflavin biosynthesis protein ribd [Caldicellulosiruptor
           owensensis OL]
 gi|311774525|gb|ADQ04012.1| riboflavin biosynthesis protein RibD [Caldicellulosiruptor
           owensensis OL]
          Length = 371

 Score = 43.9 bits (102), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 43/149 (28%), Positives = 70/149 (46%), Gaps = 20/149 (13%)

Query: 7   FMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
           +M+ ALE A+ A+    +P   VG V V N  II +  ++    K    HAE+LAI    
Sbjct: 9   YMNMALELAKKASYL-VLPNPRVGCVIVKNGTIIGKGYHQKYGEK----HAEVLAIEDAI 63

Query: 64  RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFY 117
           +  +   L    +YV+LEPC+       C  AI  + I+++     +P    I NG    
Sbjct: 64  K--NGYSLKNATMYVSLEPCSHFGKQPPCTEAIIKSGIKKVVVATRDP--NPIVNGKGIQ 119

Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDFFK 146
            L    H  E+  G+ ++ +  + ++FFK
Sbjct: 120 ILK--QHGIEVVEGVLQKEAEIVNKEFFK 146


>gi|171057779|ref|YP_001790128.1| CMP/dCMP deaminase zinc-binding [Leptothrix cholodnii SP-6]
 gi|170775224|gb|ACB33363.1| CMP/dCMP deaminase zinc-binding [Leptothrix cholodnii SP-6]
          Length = 166

 Score = 43.9 bits (102), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 30/81 (37%), Positives = 37/81 (45%), Gaps = 7/81 (8%)

Query: 25  PVGA--VAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEP 82
           P GA  VA  +  ++   GN      D   HAE +  R   R  S   L +  LY T+EP
Sbjct: 35  PFGALLVAADHRTVLLSQGN-----LDSVNHAEAVLAREAARRFSPAELWDCTLYTTVEP 89

Query: 83  CTMCAAAISLARIRRLYYGAS 103
           C MCA     A I RL +G S
Sbjct: 90  CCMCAGTQYWAHIGRLVFGMS 110


>gi|299136120|ref|ZP_07029304.1| CMP/dCMP deaminase zinc-binding [Acidobacterium sp. MP5ACTX8]
 gi|298602244|gb|EFI58398.1| CMP/dCMP deaminase zinc-binding [Acidobacterium sp. MP5ACTX8]
          Length = 156

 Score = 43.9 bits (102), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 30/106 (28%), Positives = 47/106 (44%), Gaps = 4/106 (3%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
            +  A+EEA+       IP+GA     +  ++SR  NR  +  D + H E  A R   R 
Sbjct: 14  MLRVAIEEARAGLAEGGIPIGAAIFRADGSLVSRGHNRRVQQDDPSIHGETDAFRRAGR- 72

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIE 111
             Q+   ++ +  TL PC  C+  +     + +  G S    GGIE
Sbjct: 73  --QKSYRDLIMVTTLAPCFYCSGLVRQFGFQTVVVGESRTFQGGIE 116


>gi|119358266|ref|YP_912910.1| CMP/dCMP deaminase, zinc-binding [Chlorobium phaeobacteroides DSM
           266]
 gi|119355615|gb|ABL66486.1| CMP/dCMP deaminase, zinc-binding protein [Chlorobium
           phaeobacteroides DSM 266]
          Length = 197

 Score = 43.9 bits (102), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 28/102 (27%), Positives = 52/102 (50%), Gaps = 9/102 (8%)

Query: 52  AHAEILAIRMGCRILSQ-----EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS--N 104
           AHAE++AI +  + LS        LP+ +L  + EPC MC  AI  + +++L +GA+   
Sbjct: 82  AHAEMVAILLAQQKLSTYDLGLSSLPDHELVSSCEPCAMCFGAIIWSGVKKLVFGATGKT 141

Query: 105 PKGGGIENGTQ--FYTLATCHHSPEIYPGISEQRSRQIIQDF 144
            K  G + G +   +  A      E+ P +  + +  I++++
Sbjct: 142 AKAAGFDEGPKPRLWIRALEQRGIEVTPRVCCKEAEAILENY 183


>gi|326507252|dbj|BAJ95703.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 249

 Score = 43.9 bits (102), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 16/36 (44%), Positives = 23/36 (63%)

Query: 75  DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI 110
           D+Y+  EPCTMCA A+   R +R++Y   NP  G +
Sbjct: 169 DIYLVWEPCTMCAMALVHQRFKRVFYAFPNPVTGAL 204


>gi|282863790|ref|ZP_06272848.1| CMP/dCMP deaminase zinc-binding [Streptomyces sp. ACTE]
 gi|282561491|gb|EFB67035.1| CMP/dCMP deaminase zinc-binding [Streptomyces sp. ACTE]
          Length = 142

 Score = 43.9 bits (102), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 26/114 (22%), Positives = 51/114 (44%), Gaps = 7/114 (6%)

Query: 33  NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISL 92
           +  +++   N      D+TAH E+   R   R L      E  +Y + +PC MC A I  
Sbjct: 36  DGTVLAEERNTTLTDGDITAHPELKLARWAARELDAATAAETTMYTSCQPCEMCQAVIQR 95

Query: 93  ARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
           A +RR+ +  S  +   I  G+    +      P+  P + ++  R +++ +++
Sbjct: 96  AGLRRVVFALSGRQLLDIRPGSGLPPV------PQTGPALLDE-VRAVVEGYYR 142


>gi|302307191|ref|NP_983768.2| ADL328Cp [Ashbya gossypii ATCC 10895]
 gi|299788881|gb|AAS51592.2| ADL328Cp [Ashbya gossypii ATCC 10895]
          Length = 151

 Score = 43.9 bits (102), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 28/99 (28%), Positives = 41/99 (41%), Gaps = 3/99 (3%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M  A +EA        +P+G   +   +  ++ R  N   +    T H E  A+    R 
Sbjct: 9   MEIAYQEALQGYAEGGVPIGGCLIDQTDGTVLGRGRNMRFQRASATLHGETAALENAGR- 67

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASN 104
           L   +     LY TL PC MCA A+ L  I R   G ++
Sbjct: 68  LPGHVYKHCTLYTTLSPCDMCAGAVLLYGIPRCVVGEND 106


>gi|91784309|ref|YP_559515.1| putative cytidine/deoxycytidylate deaminase family protein
           [Burkholderia xenovorans LB400]
 gi|91688263|gb|ABE31463.1| Putative cytidine/deoxycytidylate deaminase family protein
           [Burkholderia xenovorans LB400]
          Length = 180

 Score = 43.9 bits (102), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 32/107 (29%), Positives = 47/107 (43%), Gaps = 12/107 (11%)

Query: 15  AQNAALRNEIPVGAVAVLNNK--IISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILP 72
           A+ A L    P GAV V  ++  ++   GN      D   HAE +  R+     +   L 
Sbjct: 39  AERATLLGHHPFGAVLVGPDQETVLMEQGN-----VDTVNHAESVLARVAALNFTPAYLW 93

Query: 73  EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPK-----GGGIENGT 114
              LY ++EPC MCA  +  A I R+ +G +  +     G   EN T
Sbjct: 94  SCTLYTSVEPCCMCAGTMYWANIGRVVFGMTEKRLLEATGAHAENPT 140


>gi|326506166|dbj|BAJ86401.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 270

 Score = 43.9 bits (102), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 16/36 (44%), Positives = 23/36 (63%)

Query: 75  DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI 110
           D+Y+  EPCTMCA A+   R +R++Y   NP  G +
Sbjct: 190 DIYLVWEPCTMCAMALVHQRFKRVFYAFPNPVTGAL 225


>gi|118470530|ref|YP_887878.1| cytidine/deoxycytidylate deaminase, zinc-binding region
           [Mycobacterium smegmatis str. MC2 155]
 gi|118171817|gb|ABK72713.1| cytidine/deoxycytidylate deaminase, zinc-binding region
           [Mycobacterium smegmatis str. MC2 155]
          Length = 159

 Score = 43.9 bits (102), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 34/113 (30%), Positives = 56/113 (49%), Gaps = 4/113 (3%)

Query: 12  LEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNR-ELKDVTAHAEILAIRMGCRILSQEI 70
           ++ A+ A    + P G+V ++++   +   +RNR +  D TAH E    R   R L+ + 
Sbjct: 15  VDLAREALDDGDEPFGSV-LVDHTGTTLFEDRNRVKDGDATAHPEFAIARWAARHLTPDR 73

Query: 71  LPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG--IENGTQFYTLAT 121
                +Y + E C MCAAA +   + R+ Y  S+ + GG   E G Q   +AT
Sbjct: 74  RARATVYTSGEHCPMCAAAHAWVGLGRIVYATSSAQLGGWLTEWGAQAPPVAT 126


>gi|319795221|ref|YP_004156861.1| cmp/dcmp deaminase zinc-binding protein [Variovorax paradoxus EPS]
 gi|315597684|gb|ADU38750.1| CMP/dCMP deaminase zinc-binding protein [Variovorax paradoxus EPS]
          Length = 158

 Score = 43.9 bits (102), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 33/94 (35%), Positives = 40/94 (42%), Gaps = 7/94 (7%)

Query: 11  ALEEAQNAALRNEIPVGAVAVLNN--KIISRAGNRNRELKDVTAHAEILAIRMGCRILSQ 68
           A E A+ A      P GAV V  +   I++  GN      D   HAE    R   +    
Sbjct: 13  ADEVARRAMAMGRHPFGAVLVAPDGETILAEQGN-----IDTVNHAEATLARHAAQNWPA 67

Query: 69  EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGA 102
           E L +  L  T EPC MCA     A I R+ YGA
Sbjct: 68  EYLWQCTLVTTFEPCAMCAGTSYWANIGRVVYGA 101


>gi|156055462|ref|XP_001593655.1| hypothetical protein SS1G_05083 [Sclerotinia sclerotiorum 1980]
 gi|154702867|gb|EDO02606.1| hypothetical protein SS1G_05083 [Sclerotinia sclerotiorum 1980
           UF-70]
          Length = 188

 Score = 43.9 bits (102), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 41/93 (44%), Gaps = 2/93 (2%)

Query: 49  DVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGG 108
           D   HAE    R+      +E L    L  T EPC MC+A I  A I R+ Y A+N +  
Sbjct: 73  DQVNHAESSLARLAYSHYKKEYLWRCTLISTWEPCAMCSATIYWAHIGRIVYAATNEQLA 132

Query: 109 GIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141
           G+             H+ +I  G  +Q+  +II
Sbjct: 133 GLTGPGNRENFTLKWHTRDILEG--QQKDIEII 163


>gi|123505764|ref|XP_001329053.1| Cytidine and deoxycytidylate deaminase zinc-binding region family
           protein [Trichomonas vaginalis G3]
 gi|121912003|gb|EAY16830.1| Cytidine and deoxycytidylate deaminase zinc-binding region family
           protein [Trichomonas vaginalis G3]
          Length = 264

 Score = 43.9 bits (102), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 17/39 (43%), Positives = 25/39 (64%)

Query: 74  VDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN 112
           +D+Y   EPC MC  A+  +R+ RL++   NPK GG+ N
Sbjct: 201 LDVYCYYEPCCMCTMAMVHSRVGRLFFIEPNPKYGGVMN 239


>gi|261417115|ref|YP_003250798.1| riboflavin biosynthesis protein RibD [Fibrobacter succinogenes
           subsp. succinogenes S85]
 gi|261373571|gb|ACX76316.1| riboflavin biosynthesis protein RibD [Fibrobacter succinogenes
           subsp. succinogenes S85]
 gi|302326859|gb|ADL26060.1| riboflavin biosynthesis protein RibD [Fibrobacter succinogenes
           subsp. succinogenes S85]
          Length = 421

 Score = 43.9 bits (102), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 35/107 (32%), Positives = 54/107 (50%), Gaps = 17/107 (15%)

Query: 7   FMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           FM  ALE+A  A    R    VGAV V +  ++     + R  +  +AHAE++A+R    
Sbjct: 8   FMQFALEQAFFAIGESRPNPAVGAVVVKDGIVV----GKGRTQRPGSAHAEVMALRD--- 60

Query: 65  ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP 105
             + E+     ++VTLEPC        C  AI  A I+++Y+  S+P
Sbjct: 61  --AGELARGASIFVTLEPCCHYGRTPPCTKAIIEAGIQKVYFAHSDP 105


>gi|242075038|ref|XP_002447455.1| hypothetical protein SORBIDRAFT_06g001320 [Sorghum bicolor]
 gi|241938638|gb|EES11783.1| hypothetical protein SORBIDRAFT_06g001320 [Sorghum bicolor]
          Length = 412

 Score = 43.9 bits (102), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 16/36 (44%), Positives = 23/36 (63%)

Query: 75  DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI 110
           D+Y+  EPCTMCA A+   R +R++Y   NP  G +
Sbjct: 339 DIYLVWEPCTMCAMALVHHRFKRVFYAFPNPVTGAL 374


>gi|284989444|ref|YP_003407998.1| cytosine deaminase [Geodermatophilus obscurus DSM 43160]
 gi|284062689|gb|ADB73627.1| Cytosine deaminase [Geodermatophilus obscurus DSM 43160]
          Length = 165

 Score = 43.9 bits (102), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 27/100 (27%), Positives = 44/100 (44%), Gaps = 1/100 (1%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           ++    +  A+E+A+       +P+GA  V  +++++   NR  ++     H E   I  
Sbjct: 17  ERDRFLLGLAVEQARIGWEEGGVPIGAALVDGDRVLAVGRNRRVQMASAIRHGETDCIER 76

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
             R L   +     LY TL PC MCA    L  I R+  G
Sbjct: 77  AGR-LPASVYRRSVLYTTLSPCLMCAGTALLYDIPRIVVG 115


>gi|150003437|ref|YP_001298181.1| riboflavin biosynthesis protein ribD [Bacteroides vulgatus ATCC
           8482]
 gi|254881264|ref|ZP_05253974.1| riboflavin biosynthesis protein ribD [Bacteroides sp. 4_3_47FAA]
 gi|149931861|gb|ABR38559.1| riboflavin biosynthesis protein ribD [Bacteroides vulgatus ATCC
           8482]
 gi|254834057|gb|EET14366.1| riboflavin biosynthesis protein ribD [Bacteroides sp. 4_3_47FAA]
          Length = 350

 Score = 43.5 bits (101), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 48/158 (30%), Positives = 71/158 (44%), Gaps = 29/158 (18%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57
           M K   ++S  L+ A N  L N  P   VGAV V ++ II         ++   AHAE+ 
Sbjct: 1   MTKDEKYISRCLQLAYNG-LCNTAPNPMVGAVIVYHDTIIGEG----YHIRCGEAHAEVN 55

Query: 58  AIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP----KG 107
           AIR    +  + +L E  +YV+LEPC+       CA  I   RI ++  G  +P     G
Sbjct: 56  AIR---SVKDENLLKESTIYVSLEPCSHYGKTPPCADLIIEKRIPKVVIGCIDPYSQVAG 112

Query: 108 GGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
            GIE   +           E+  G+ E+  R +I+ F 
Sbjct: 113 KGIEKLRK--------AGIEVTVGVLEEECRHLIRRFI 142


>gi|284040576|ref|YP_003390506.1| cytosine deaminase [Spirosoma linguale DSM 74]
 gi|283819869|gb|ADB41707.1| Cytosine deaminase [Spirosoma linguale DSM 74]
          Length = 144

 Score = 43.5 bits (101), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 26/97 (26%), Positives = 46/97 (47%), Gaps = 3/97 (3%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  A+ +A+ +     IP+G+  V N ++++   N+  +  +   H E+  +    R+ 
Sbjct: 4   FMQEAINQARKSLSEGGIPIGSSLVKNGELVASGHNKRVQENNPILHGEMDCLNNAGRVG 63

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
           S        +Y TL PC MCA  I   +I ++  G S
Sbjct: 64  S---FRNTVIYSTLMPCYMCAGTIVQFKIPKVIVGES 97


>gi|262340928|ref|YP_003283783.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Blattabacterium sp. (Blattella germanica)
           str. Bge]
 gi|262272265|gb|ACY40173.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Blattabacterium sp. (Blattella germanica)
           str. Bge]
          Length = 343

 Score = 43.5 bits (101), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 41/123 (33%), Positives = 57/123 (46%), Gaps = 19/123 (15%)

Query: 1   MKKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           MK    FMS A++ A+N   + +  P VG V   N  IIS   +  + +     HAE +A
Sbjct: 1   MKDKETFMSRAIQLAKNGLGMTSPNPMVGCVIERNGFIISEGWHYKKGM----DHAEAIA 56

Query: 59  IRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP----KGG 108
           I    RI ++ +  +  LYVTLEPC        C   I    I R+  G  +P    KG 
Sbjct: 57  IN---RIKNKSLFLDSTLYVTLEPCVHFGETSPCVDLIIKNHIPRIVVGIQDPHDKVKGL 113

Query: 109 GIE 111
           GI+
Sbjct: 114 GIQ 116


>gi|321254023|ref|XP_003192936.1| hypothetical protein CGB_C6380W [Cryptococcus gattii WM276]
 gi|317459405|gb|ADV21149.1| hypothetical protein CNC04270 [Cryptococcus gattii WM276]
          Length = 647

 Score = 43.5 bits (101), Expect = 0.010,   Method: Composition-based stats.
 Identities = 17/42 (40%), Positives = 27/42 (64%)

Query: 70  ILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIE 111
           +L  + L+++ EPC MCA A+  +R+R ++Y     KGGG E
Sbjct: 537 LLTSLSLFISHEPCVMCAMALLHSRVREVFYVFPRRKGGGFE 578


>gi|300789562|ref|YP_003769853.1| cytidine/deoxycytidine deaminase [Amycolatopsis mediterranei U32]
 gi|299799076|gb|ADJ49451.1| cytidine/deoxycytidine deaminase [Amycolatopsis mediterranei U32]
          Length = 141

 Score = 43.5 bits (101), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 1/81 (1%)

Query: 25  PVGAV-AVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83
           P G++ A  + KI++   N +    D+TAH E+   R   + L  E      ++ + +PC
Sbjct: 27  PFGSLLADADGKILAEDRNTSLTDNDITAHPELKLARWAAQNLDPETAAATTMFTSTQPC 86

Query: 84  TMCAAAISLARIRRLYYGASN 104
            MC  AI  + + R+ Y  S 
Sbjct: 87  GMCTGAIERSGLGRVVYALST 107


>gi|328876450|gb|EGG24813.1| CMP/dCMP deaminase [Dictyostelium fasciculatum]
          Length = 251

 Score = 43.5 bits (101), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 23/76 (30%), Positives = 38/76 (50%), Gaps = 1/76 (1%)

Query: 27  GAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMC 86
           GAV V  N  ++  G    ++  +  H EI+AI     + ++ +     LY T EPC MC
Sbjct: 80  GAVIVNENGTLACTGVNQGKINRIN-HGEIVAINNCSNLYTKNMFEGWTLYTTGEPCPMC 138

Query: 87  AAAISLARIRRLYYGA 102
            AAI   + + + +G+
Sbjct: 139 QAAIMWTKFKTVVFGS 154


>gi|164659978|ref|XP_001731113.1| hypothetical protein MGL_2112 [Malassezia globosa CBS 7966]
 gi|159105011|gb|EDP43899.1| hypothetical protein MGL_2112 [Malassezia globosa CBS 7966]
          Length = 58

 Score = 43.5 bits (101), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 21/40 (52%), Positives = 28/40 (70%), Gaps = 2/40 (5%)

Query: 75  DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGT 114
            LYVT+EPC MCA+A+    I+R+ +GA N + GG  NGT
Sbjct: 5   TLYVTIEPCLMCASALRQIGIQRVVFGAGNERFGG--NGT 42


>gi|298249165|ref|ZP_06972969.1| riboflavin biosynthesis protein RibD [Ktedonobacter racemifer DSM
           44963]
 gi|297547169|gb|EFH81036.1| riboflavin biosynthesis protein RibD [Ktedonobacter racemifer DSM
           44963]
          Length = 383

 Score = 43.5 bits (101), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 34/89 (38%), Positives = 42/89 (47%), Gaps = 18/89 (20%)

Query: 25  PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEV--DLYVTLEP 82
           PVGAV V  N++I R             HAEI A+R        E    V  DLY TLEP
Sbjct: 26  PVGAVLVRENQVIGRGATS----PPYGPHAEIHALR------EAETTAAVGADLYTTLEP 75

Query: 83  CTM------CAAAISLARIRRLYYGASNP 105
           C +      C AAI  A I+R+  G+ +P
Sbjct: 76  CCITVHTPPCTAAIIAAGIKRVIIGSLDP 104


>gi|289742059|gb|ADD19777.1| tRNA-specific adenosine-34 deaminase subunit [Glossina morsitans
           morsitans]
          Length = 344

 Score = 43.5 bits (101), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 15/60 (25%), Positives = 35/60 (58%)

Query: 75  DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISE 134
           D+Y++ EPC MC+ A+  +R++R+++   +   G ++   +   +   +H  E+Y  ++E
Sbjct: 284 DVYLSQEPCLMCSMALLHSRVKRIFFLYESKINGSLKTNFKLQQVKDLNHHYEVYQFVAE 343


>gi|19114320|ref|NP_593408.1| tRNA specific adenosine deaminase subunit Tad3 (predicted)
           [Schizosaccharomyces pombe 972h-]
 gi|74638746|sp|Q9P7N4|TAD3_SCHPO RecName: Full=tRNA-specific adenosine deaminase subunit tad3;
           AltName: Full=tRNA-specific adenosine-34 deaminase
           subunit tad3
 gi|7106099|emb|CAB76025.1| tRNA specific adenosine deaminase subunit Tad3 (predicted)
           [Schizosaccharomyces pombe]
          Length = 315

 Score = 43.5 bits (101), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 32/113 (28%), Positives = 50/113 (44%), Gaps = 18/113 (15%)

Query: 22  NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81
           N   + A+ ++  + +SR  NR    KD          R  C+ L+        + +T E
Sbjct: 210 NHCVMNAINLVAKRELSRRQNRTDGSKD----------RYLCKDLT--------VVMTHE 251

Query: 82  PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISE 134
           PC MC+  +  +RIRRL Y    P  GGIE+    +  A  +H    Y G ++
Sbjct: 252 PCVMCSMGLLHSRIRRLIYCKKQPLTGGIESLYGIHWRAELNHRYLAYSGWNK 304


>gi|251795232|ref|YP_003009963.1| CMP/dCMP deaminase zinc-binding [Paenibacillus sp. JDR-2]
 gi|247542858|gb|ACS99876.1| CMP/dCMP deaminase zinc-binding [Paenibacillus sp. JDR-2]
          Length = 159

 Score = 43.5 bits (101), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 24/80 (30%), Positives = 33/80 (41%), Gaps = 1/80 (1%)

Query: 25  PVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83
           P GA+ V    +I+    N     K  T HAE   +           L    LY T EPC
Sbjct: 26  PFGAILVNEQGEIVLEQENVELTEKRCTGHAETALMEKASHQFEHHDLWNYTLYTTFEPC 85

Query: 84  TMCAAAISLARIRRLYYGAS 103
            MC+ AI    + ++ Y A+
Sbjct: 86  AMCSGAIYWGNVGKVVYAAT 105


>gi|152993547|ref|YP_001359268.1| riboflavin biosynthesis protein RibG [Sulfurovum sp. NBC37-1]
 gi|151425408|dbj|BAF72911.1| riboflavin biosynthesis protein RibG [Sulfurovum sp. NBC37-1]
          Length = 330

 Score = 43.5 bits (101), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 36/138 (26%), Positives = 58/138 (42%), Gaps = 37/138 (26%)

Query: 7   FMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           +M  AL++A    L       VGAV  L+  I++   ++    K  T+HAE+LA+     
Sbjct: 6   YMQLALDKAWEYQLLTYPNPAVGAVVTLDGTILAVEAHK----KAGTSHAEVLALLKAYE 61

Query: 65  ILSQ----------------------EILPEVDLYVTLEPCT------MCAAAISLARIR 96
            LSQ                      +   E  +YVTLEPC+       CA  +    ++
Sbjct: 62  TLSQSTVDFDRMDAQKAHNFLHTIPKDFFSECSIYVTLEPCSHEGRTPACATLLEALNLK 121

Query: 97  RLYYGASNP---KGGGIE 111
           ++  G  +P    GGG++
Sbjct: 122 KVIIGTKDPIEGHGGGMD 139


>gi|254518952|ref|ZP_05131008.1| cytidine/deoxycytidylate deaminase [Clostridium sp. 7_2_43FAA]
 gi|226912701|gb|EEH97902.1| cytidine/deoxycytidylate deaminase [Clostridium sp. 7_2_43FAA]
          Length = 160

 Score = 43.5 bits (101), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 26/81 (32%), Positives = 34/81 (41%), Gaps = 1/81 (1%)

Query: 24  IPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEP 82
           +P G + V  +  II    N        T HAE   +       S+  L +  LY T EP
Sbjct: 25  MPFGCILVDKDGNIILEQMNIEGTDYKCTGHAETQLMEKASMKYSKSFLWDCTLYSTAEP 84

Query: 83  CTMCAAAISLARIRRLYYGAS 103
           C MC  AI    + R+ YG S
Sbjct: 85  CAMCTGAIYWGNVGRIVYGLS 105


>gi|29831349|ref|NP_825983.1| cytidine/deoxycytidine deaminase [Streptomyces avermitilis MA-4680]
 gi|29608464|dbj|BAC72518.1| putative cytidine/deoxycytidine deaminase [Streptomyces avermitilis
           MA-4680]
          Length = 153

 Score = 43.5 bits (101), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 29/104 (27%), Positives = 45/104 (43%), Gaps = 4/104 (3%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           +++ A+EEA+       IP+GA     +  ++ R  NR  +  D + HAE  A R   R 
Sbjct: 13  WLATAVEEARAGLAEGGIPIGAALYGADGALLGRGHNRRVQDDDPSMHAETAAFRSAGR- 71

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109
             Q       +  TL PC  C+  +    I R+  G +    GG
Sbjct: 72  --QRTYRGTTMVTTLSPCWYCSGLVRQFGISRVVVGEAATFHGG 113


>gi|294498727|ref|YP_003562427.1| riboflavin biosynthesis protein RibD [Bacillus megaterium QM B1551]
 gi|294348664|gb|ADE68993.1| riboflavin biosynthesis protein RibD [Bacillus megaterium QM B1551]
          Length = 363

 Score = 43.1 bits (100), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 44/149 (29%), Positives = 69/149 (46%), Gaps = 23/149 (15%)

Query: 7   FMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
           +M+ AL+ A+    + + P   VG+V V +N+I+         LK    HAEI A+RM  
Sbjct: 7   YMNIALQNAKATKGQTD-PNPLVGSVIVNDNRIVGIG----THLKAGEPHAEIHALRM-- 59

Query: 64  RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFY 117
              + E       YVTLEPC+       CA A+  A ++++     +P      NG +  
Sbjct: 60  ---AGEQAKGATAYVTLEPCSHHGRTGPCAEALVEAGVKKVVIATLDPNPLVAGNGVKIL 116

Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDFFK 146
             A      E+  G+ E+ SRQ+ + F K
Sbjct: 117 ENAGI----EVITGVCEEESRQMNEVFNK 141


>gi|328883182|emb|CCA56421.1| Cytosine deaminase [Streptomyces venezuelae ATCC 10712]
          Length = 168

 Score = 43.1 bits (100), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 33/118 (27%), Positives = 50/118 (42%), Gaps = 8/118 (6%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           +++ AL EA+       +PVGA     +  ++ R  NR  +  D +AHAE  A R   R 
Sbjct: 27  WLATALAEARAGRDEGGVPVGAALYGADGALLGRGHNRRVQDGDPSAHAETAAFRAAGR- 85

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG----IENGTQFYTL 119
             Q       +  TL PC  C+  +    I R+  G +    GG     E+G +   L
Sbjct: 86  --QRSYRGTTMVTTLSPCWYCSGLVRQFGISRVVVGEAETFHGGHDWLAEHGVEVLVL 141


>gi|13472273|ref|NP_103840.1| hypothetical protein mll2512 [Mesorhizobium loti MAFF303099]
 gi|14023018|dbj|BAB49626.1| mll2512 [Mesorhizobium loti MAFF303099]
          Length = 156

 Score = 43.1 bits (100), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 35/109 (32%), Positives = 44/109 (40%), Gaps = 8/109 (7%)

Query: 1   MKKGNVF--MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEIL 57
           M +  +F  +  A + A+ AA     P G V V  ++ I+ R GN N        HAE  
Sbjct: 1   MTRDQMFAHLRAANDVAREAAAHGHHPFGCVLVGPDDHILMRQGNIN-----TVRHAETE 55

Query: 58  AIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPK 106
             R        E L    L  T EPC MC   +  A I RL YG    K
Sbjct: 56  LGRRAADAYPPEFLWSCTLVSTGEPCAMCTGTLYWANIGRLVYGFEETK 104


>gi|308484008|ref|XP_003104205.1| hypothetical protein CRE_01105 [Caenorhabditis remanei]
 gi|308258513|gb|EFP02466.1| hypothetical protein CRE_01105 [Caenorhabditis remanei]
          Length = 337

 Score = 43.1 bits (100), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 28/108 (25%), Positives = 53/108 (49%), Gaps = 5/108 (4%)

Query: 23  EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR-MGCRILSQEILPEVDLYVTLE 81
           E+  G +AV +N ++S        L     H  +  +R +  R  S  +    D+++  E
Sbjct: 209 EMGDGCIAVQSNSVLSSGCPSTHPL----GHPVMEMVRNLQKRTGSDYLGTGSDVFLVNE 264

Query: 82  PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIY 129
           PC MC+ A+   RI+RL+Y  ++  G   ++G Q +   + +H  E++
Sbjct: 265 PCAMCSMALVHFRIKRLFYVRNSKNGVLKDDGWQLHLEPSINHHYEVF 312


>gi|297201565|ref|ZP_06918962.1| cytidine/deoxycytidine deaminase [Streptomyces sviceus ATCC 29083]
 gi|197711065|gb|EDY55099.1| cytidine/deoxycytidine deaminase [Streptomyces sviceus ATCC 29083]
          Length = 152

 Score = 43.1 bits (100), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 29/104 (27%), Positives = 45/104 (43%), Gaps = 4/104 (3%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           +++ A+EEA+       IP+GA     +  ++ R  NR  +  D + HAE  A R   R 
Sbjct: 12  WLATAVEEARAGLAEGGIPIGAALYGADGTLLGRGHNRRVQDGDPSLHAETAAFRAAGR- 70

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109
             Q       +  TL PC  C+  +    I R+  G +    GG
Sbjct: 71  --QRSYRGTTMVTTLSPCWYCSGLVRQFGIGRVVVGEATTFHGG 112


>gi|239816932|ref|YP_002945842.1| CMP/dCMP deaminase zinc-binding [Variovorax paradoxus S110]
 gi|239803509|gb|ACS20576.1| CMP/dCMP deaminase zinc-binding [Variovorax paradoxus S110]
          Length = 158

 Score = 43.1 bits (100), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 32/94 (34%), Positives = 40/94 (42%), Gaps = 7/94 (7%)

Query: 11  ALEEAQNAALRNEIPVGAVAVLNN--KIISRAGNRNRELKDVTAHAEILAIRMGCRILSQ 68
           A E A+ A      P GAV V  +   I++  GN      D   HAE    R   +    
Sbjct: 13  ADEVARRAMAMGRHPFGAVLVAPDGETILAEQGN-----IDTVNHAEATLARHAAQNWPA 67

Query: 69  EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGA 102
           + L +  L  T EPC MCA     A I R+ YGA
Sbjct: 68  DYLWQCTLVTTFEPCAMCAGTSYWAHIGRIVYGA 101


>gi|302871184|ref|YP_003839820.1| riboflavin biosynthesis protein RibD [Caldicellulosiruptor
           obsidiansis OB47]
 gi|302574043|gb|ADL41834.1| riboflavin biosynthesis protein RibD [Caldicellulosiruptor
           obsidiansis OB47]
          Length = 371

 Score = 43.1 bits (100), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 43/149 (28%), Positives = 69/149 (46%), Gaps = 20/149 (13%)

Query: 7   FMSCALEEAQNAA---LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
           +M+ ALE A+ A+   L N   VG V V N  II +  ++    K    HAE+LAI    
Sbjct: 9   YMNMALELAKKASPLVLPNP-RVGCVIVKNGTIIGKGYHQKYGEK----HAEVLAIEDAI 63

Query: 64  RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFY 117
           +  +   L    +YV+LEPC        C  AI  + I+++     +P    + NG    
Sbjct: 64  K--NGNSLKNATMYVSLEPCCHFGKQPPCTEAIIKSGIKKVIIATRDP--NPLVNGKGIQ 119

Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDFFK 146
            L    H  E+  G+ ++ +  + ++FFK
Sbjct: 120 ILK--QHGIEVVEGVLQKEAESVNKEFFK 146


>gi|254498334|ref|ZP_05111073.1| cytidine and deoxycytidylate deaminase family protein [Legionella
           drancourtii LLAP12]
 gi|254352442|gb|EET11238.1| cytidine and deoxycytidylate deaminase family protein [Legionella
           drancourtii LLAP12]
          Length = 175

 Score = 43.1 bits (100), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 29/104 (27%), Positives = 53/104 (50%), Gaps = 7/104 (6%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNN--KIISRAGNRNRELKDVTAHAEILAI 59
           K    +M  A++ A++     + P  A+ V N   +I+S+  N ++   + T H E++AI
Sbjct: 31  KSDEYYMQIAIDLAKS---NPKAPFAALIVDNKTGEILSKGINASKV--NPTFHGEMVAI 85

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
               +   +    +V LY T EPC+MC +A+   +I R+ +  S
Sbjct: 86  NNCVKEHPKVDWSQVTLYTTAEPCSMCQSAVVWTKISRVVFATS 129


>gi|25144639|ref|NP_499445.2| hypothetical protein Y47D3A.14 [Caenorhabditis elegans]
 gi|19571667|emb|CAB55073.2| C. elegans protein Y47D3A.14, confirmed by transcript evidence
           [Caenorhabditis elegans]
          Length = 287

 Score = 43.1 bits (100), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 16/55 (29%), Positives = 33/55 (60%)

Query: 75  DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIY 129
           D+++  EPC MC+ A+   R++R++Y  ++  G   E+G Q +   + +H  E++
Sbjct: 209 DVFLITEPCAMCSMALVHFRVKRVFYARNSRNGVLKEDGWQLHLEPSINHHYEVF 263


>gi|294777680|ref|ZP_06743131.1| riboflavin biosynthesis protein RibD [Bacteroides vulgatus PC510]
 gi|319640266|ref|ZP_07994991.1| riboflavin biosynthesis protein ribD [Bacteroides sp. 3_1_40A]
 gi|294448748|gb|EFG17297.1| riboflavin biosynthesis protein RibD [Bacteroides vulgatus PC510]
 gi|317388041|gb|EFV68895.1| riboflavin biosynthesis protein ribD [Bacteroides sp. 3_1_40A]
          Length = 350

 Score = 43.1 bits (100), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 48/157 (30%), Positives = 71/157 (45%), Gaps = 29/157 (18%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57
           M K   ++S  L+ A N  L N  P   VGAV V ++ II         ++   AHAE+ 
Sbjct: 1   MTKDEKYISRCLQLAYNG-LCNTAPNPMVGAVIVYHDTIIGEG----YHIRCGEAHAEVN 55

Query: 58  AIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP----KG 107
           AIR    +  + +L E  +YV+LEPC+       CA  I   RI ++  G  +P     G
Sbjct: 56  AIR---SVKDENLLKESTIYVSLEPCSHYGKTPPCADLIIEKRIPKVVIGCIDPFSQVAG 112

Query: 108 GGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
            GIE   +           E+  G+ E+  R +I+ F
Sbjct: 113 RGIEKLRK--------AGIEVTVGVLEEECRHLIRRF 141


>gi|225851435|ref|YP_002731669.1| riboflavin biosynthesis protein RibD [Persephonella marina EX-H1]
 gi|225645583|gb|ACO03769.1| riboflavin biosynthesis protein RibD [Persephonella marina EX-H1]
          Length = 365

 Score = 43.1 bits (100), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 46/159 (28%), Positives = 68/159 (42%), Gaps = 29/159 (18%)

Query: 6   VFMSCALEEAQ-NAALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
           +FM  AL  A+    L +  P VGAV V + KII +  ++   +      A   AI+ G 
Sbjct: 8   IFMKEALRLAELRKGLTHPNPTVGAVIVKDGKIIGKGFHKKAGMPHAEREAINDAIKKGF 67

Query: 64  RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP----KGGGIENG 113
            +          +YVTLEPC        C  AI   RI+R+     +P     G G+E  
Sbjct: 68  NLEGST------MYVTLEPCCHYGRTPPCTEAIIDRRIKRVVIATVDPNPQVSGKGVE-- 119

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFF---KERR 149
                     H  E   G+ +  +R++ +DFF   KE+R
Sbjct: 120 ------ILKKHGIETVVGVLQDEARKLNEDFFVYIKEKR 152


>gi|95929567|ref|ZP_01312309.1| riboflavin biosynthesis protein RibD [Desulfuromonas acetoxidans
           DSM 684]
 gi|95134264|gb|EAT15921.1| riboflavin biosynthesis protein RibD [Desulfuromonas acetoxidans
           DSM 684]
          Length = 364

 Score = 43.1 bits (100), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 42/148 (28%), Positives = 65/148 (43%), Gaps = 21/148 (14%)

Query: 8   MSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M  AL+ A+ A  R     PVGAV V + +++ R  +     K    HAE+ A+R     
Sbjct: 1   MQIALDLARKALGRTTPNPPVGAVIVRDGQVVGRGFHP----KAGEPHAEVFALRD---- 52

Query: 66  LSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
            + +     D YVTLEPC+       C  A+  A + R++ G  +P       G +    
Sbjct: 53  -AADQARGADAYVTLEPCSHHGRTPPCCEALIAAGVSRVFVGLIDPNPQVSGQGVERLRA 111

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKE 147
           A      E+  G+ E + R++I  F K 
Sbjct: 112 AGV----EVEVGVLETQCRRLIAPFIKH 135


>gi|313665291|ref|YP_004047162.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Mycoplasma leachii PG50]
 gi|312949249|gb|ADR23845.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Mycoplasma leachii PG50]
          Length = 160

 Score = 43.1 bits (100), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 26/55 (47%), Positives = 33/55 (60%), Gaps = 6/55 (10%)

Query: 51  TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNP 105
            AHAE+ AI     + S+  L   DLYVTL PC  CA  I  A I+R+YY A++P
Sbjct: 77  VAHAELNAI-----VSSRSDLSNCDLYVTLFPCNECAKIIIQAGIKRIYY-ANDP 125


>gi|42561111|ref|NP_975562.1| dCMP deaminase [Mycoplasma mycoides subsp. mycoides SC str. PG1]
 gi|42492608|emb|CAE77204.1| dCMP deaminase [Mycoplasma mycoides subsp. mycoides SC str. PG1]
 gi|256384072|gb|ACU78642.1| deoxycytidylate deaminase [Mycoplasma mycoides subsp. capri str.
           GM12]
 gi|256384904|gb|ACU79473.1| deoxycytidylate deaminase [Mycoplasma mycoides subsp. capri str.
           GM12]
 gi|296455570|gb|ADH21805.1| deoxycytidylate deaminase (dCMP deaminase) [synthetic Mycoplasma
           mycoides JCVI-syn1.0]
 gi|301320471|gb|ADK69114.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Mycoplasma mycoides subsp. mycoides SC str. Gladysdale]
          Length = 160

 Score = 43.1 bits (100), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 26/55 (47%), Positives = 33/55 (60%), Gaps = 6/55 (10%)

Query: 51  TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNP 105
            AHAE+ AI     + S+  L   DLYVTL PC  CA  I  A I+R+YY A++P
Sbjct: 77  VAHAELNAI-----VSSRSDLSNCDLYVTLFPCNECAKIIIQAGIKRIYY-ANDP 125


>gi|331703568|ref|YP_004400255.1| deoxycytidylate deaminase [Mycoplasma mycoides subsp. capri LC str.
           95010]
 gi|328802123|emb|CBW54277.1| Deoxycytidylate deaminase (dCMP deaminase) [Mycoplasma mycoides
           subsp. capri LC str. 95010]
          Length = 146

 Score = 43.1 bits (100), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 26/55 (47%), Positives = 33/55 (60%), Gaps = 6/55 (10%)

Query: 51  TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNP 105
            AHAE+ AI     + S+  L   DLYVTL PC  CA  I  A I+R+YY A++P
Sbjct: 63  VAHAELNAI-----VSSRSDLSNCDLYVTLFPCNECAKIIIQAGIKRIYY-ANDP 111


>gi|256392530|ref|YP_003114094.1| CMP/dCMP deaminase zinc-binding [Catenulispora acidiphila DSM
           44928]
 gi|256358756|gb|ACU72253.1| CMP/dCMP deaminase zinc-binding [Catenulispora acidiphila DSM
           44928]
          Length = 143

 Score = 43.1 bits (100), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 32/138 (23%), Positives = 63/138 (45%), Gaps = 8/138 (5%)

Query: 11  ALEEAQNAALRNEIPVGAV-AVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQE 69
           A++ A +A    + P G++ A  +  I+    N  R   D+ AH E+   R   R LS E
Sbjct: 13  AIDIAAHAVTLGDAPYGSLLADADGTILIEEHNTVRRDGDIAAHPELKLARWAARELSPE 72

Query: 70  ILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIY 129
                 +Y + +PC MC   I  + + R+ Y  +  +   +  G+++  +      P+  
Sbjct: 73  AAATTTMYTSCQPCGMCTGGIVRSGLGRVVYALATDQLVELNPGSEWPVV------PQDG 126

Query: 130 PGISEQRSRQIIQDFFKE 147
           P + +  +R  I+ ++K+
Sbjct: 127 PALFDA-ARVPIEAYYKK 143


>gi|189195612|ref|XP_001934144.1| conserved hypothetical protein [Pyrenophora tritici-repentis
           Pt-1C-BFP]
 gi|187980023|gb|EDU46649.1| conserved hypothetical protein [Pyrenophora tritici-repentis
           Pt-1C-BFP]
          Length = 501

 Score = 43.1 bits (100), Expect = 0.014,   Method: Composition-based stats.
 Identities = 17/38 (44%), Positives = 25/38 (65%)

Query: 73  EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI 110
           ++D+Y+T EPC MC+ AI  +R RR  +G   P  GG+
Sbjct: 410 DLDIYLTNEPCVMCSMAILHSRFRRCIFGKRMPHTGGM 447


>gi|83319549|ref|YP_424377.1| deoxycytidylate deaminase [Mycoplasma capricolum subsp. capricolum
           ATCC 27343]
 gi|83283435|gb|ABC01367.1| probable deoxycytidylate deaminase [Mycoplasma capricolum subsp.
           capricolum ATCC 27343]
          Length = 153

 Score = 43.1 bits (100), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 26/55 (47%), Positives = 33/55 (60%), Gaps = 6/55 (10%)

Query: 51  TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNP 105
            AHAE+ AI     + S+  L   DLYVTL PC  CA  I  A I+R+YY A++P
Sbjct: 70  VAHAELNAI-----VSSRSDLSNCDLYVTLFPCNECAKIIIQAGIKRIYY-ANDP 118


>gi|237725969|ref|ZP_04556450.1| riboflavin biosynthesis protein ribD [Bacteroides sp. D4]
 gi|229435777|gb|EEO45854.1| riboflavin biosynthesis protein ribD [Bacteroides dorei 5_1_36/D4]
          Length = 355

 Score = 42.7 bits (99), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 47/157 (29%), Positives = 71/157 (45%), Gaps = 29/157 (18%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57
           M K   ++S  L+ A N  L N  P   VGAV V ++ II         ++   AHAE+ 
Sbjct: 1   MTKDEKYISRCLQLAHNG-LCNTAPNPMVGAVIVYHDTIIGEG----YHIRCGEAHAEVN 55

Query: 58  AIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP----KG 107
           AIR    +  + +L E  +YV+LEPC+       CA  I   +I ++  G  +P     G
Sbjct: 56  AIR---SVKDENLLKESTIYVSLEPCSHYGKTPPCADLIIEKKIPKVVIGCMDPFSLVAG 112

Query: 108 GGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
            GIE   +           E+  G+ E+  R +I+ F
Sbjct: 113 RGIEKLRK--------AGIEVTVGVLEEECRHLIRRF 141


>gi|54296165|ref|YP_122534.1| hypothetical protein lpp0188 [Legionella pneumophila str. Paris]
 gi|53749950|emb|CAH11335.1| hypothetical protein lpp0188 [Legionella pneumophila str. Paris]
          Length = 153

 Score = 42.7 bits (99), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 46/100 (46%), Gaps = 10/100 (10%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM+  +E A    +    P GA+ V ++K I      N    +   H E+  I    R+ 
Sbjct: 8   FMAATIEVAATNPMA---PYGAIIVYDDKEILLKSVNNAH-NNPLMHGELSVIH---RLF 60

Query: 67  SQEILPEVD---LYVTLEPCTMCAAAISLARIRRLYYGAS 103
                 +V    LY T EPC MCAAAI  A I ++ YG+S
Sbjct: 61  ENGFDGDVSRLSLYTTAEPCPMCAAAIYWAMIPKVVYGSS 100


>gi|307608893|emb|CBW98292.1| hypothetical protein LPW_01491 [Legionella pneumophila 130b]
          Length = 153

 Score = 42.7 bits (99), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 32/100 (32%), Positives = 48/100 (48%), Gaps = 10/100 (10%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM+  +E A    +    P GA+ V ++K I    + N    +   H E+  I    R+ 
Sbjct: 8   FMAATIEVAVTNPMA---PYGAIIVYDDKEI-LLKSVNSAHNNPLMHGELSVIH---RLF 60

Query: 67  SQEI---LPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
                  + ++ LY T EPC MCAAAI  A I ++ YG+S
Sbjct: 61  ENGFDGDVSKLSLYTTAEPCPMCAAAIYWAMIPKVVYGSS 100


>gi|114330216|ref|YP_746438.1| CMP/dCMP deaminase, zinc-binding [Nitrosomonas eutropha C91]
 gi|114307230|gb|ABI58473.1| CMP/dCMP deaminase, zinc-binding protein [Nitrosomonas eutropha
           C91]
          Length = 195

 Score = 42.7 bits (99), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 26/72 (36%), Positives = 37/72 (51%), Gaps = 5/72 (6%)

Query: 36  IISRAGNRNRELKDVTAHAEILAI-----RMGCRILSQEILPEVDLYVTLEPCTMCAAAI 90
           +I+   NR       TAHAEILA+     ++G   LS + LP  +L  + EPC MC  A+
Sbjct: 62  LIAAGTNRVVSSHCSTAHAEILALSLAQAKLGSHDLSADGLPACELVTSAEPCVMCFGAV 121

Query: 91  SLARIRRLYYGA 102
             + +R L   A
Sbjct: 122 IWSGVRSLVCAA 133


>gi|212695385|ref|ZP_03303513.1| hypothetical protein BACDOR_04934 [Bacteroides dorei DSM 17855]
 gi|237711578|ref|ZP_04542059.1| riboflavin biosynthesis protein ribD [Bacteroides sp. 9_1_42FAA]
 gi|265753006|ref|ZP_06088575.1| riboflavin biosynthesis protein RibD [Bacteroides sp. 3_1_33FAA]
 gi|212662020|gb|EEB22594.1| hypothetical protein BACDOR_04934 [Bacteroides dorei DSM 17855]
 gi|229454273|gb|EEO59994.1| riboflavin biosynthesis protein ribD [Bacteroides sp. 9_1_42FAA]
 gi|263236192|gb|EEZ21687.1| riboflavin biosynthesis protein RibD [Bacteroides sp. 3_1_33FAA]
          Length = 355

 Score = 42.7 bits (99), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 47/157 (29%), Positives = 72/157 (45%), Gaps = 29/157 (18%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57
           M K   ++S  L+ A N  L N  P   VGAV V ++ II    +    ++   AHAE+ 
Sbjct: 1   MTKDEKYISRCLQLAHNG-LCNTAPNPMVGAVIVYHDTIIGEGYH----IRCGEAHAEVN 55

Query: 58  AIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP----KG 107
           AIR    +  + +L E  +YV+LEPC+       CA  I   +I ++  G  +P     G
Sbjct: 56  AIR---SVKDENLLKESTIYVSLEPCSHYGKTPPCADLIIEKKIPKVVIGCMDPFSLVAG 112

Query: 108 GGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
            GIE   +           E+  G+ E+  R +I+ F
Sbjct: 113 RGIEKLRK--------AGIEVTVGVLEEECRHLIRRF 141


>gi|296503905|ref|YP_003665605.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Bacillus
           thuringiensis BMB171]
 gi|296324957|gb|ADH07885.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Bacillus
           thuringiensis BMB171]
          Length = 365

 Score = 42.7 bits (99), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 45/156 (28%), Positives = 73/156 (46%), Gaps = 25/156 (16%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP----VGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56
           M +  ++M  ALE A+  A++ +      VG+V V +N+I+    +    +K    HAEI
Sbjct: 1   MLEHELYMKLALENAK--AMKGQTTPNPLVGSVIVNDNRIVGVGAH----MKAGEPHAEI 54

Query: 57  LAIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGI 110
            AIRM     + E      +YVTLEPC+       CA AI  A I+++     +P     
Sbjct: 55  HAIRM-----AGEQARGATIYVTLEPCSHHGRTGPCAEAIVQAGIKKVVVATLDPNPLVS 109

Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
             G +    A      E+  G+ E+ S+++ + F K
Sbjct: 110 GRGIKILQDAGI----EVLVGVCEEESKKMNEVFNK 141


>gi|288941195|ref|YP_003443435.1| CMP/dCMP deaminase protein [Allochromatium vinosum DSM 180]
 gi|288896567|gb|ADC62403.1| CMP/dCMP deaminase zinc-binding protein [Allochromatium vinosum DSM
           180]
          Length = 189

 Score = 42.7 bits (99), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 33/121 (27%), Positives = 53/121 (43%), Gaps = 17/121 (14%)

Query: 33  NNKIISRAGNRNRELKDVTAHAEILAI-----RMGCRILSQEILPEVDLYVTLEPCTMCA 87
           + ++I+   NR        AHAE++AI     R+G   L Q +     L+ + EPC MC 
Sbjct: 61  SGRLIAAGVNRVVSSGCSIAHAEMVAIGIAQQRLGSFDLRQAVPGGCVLFTSAEPCAMCM 120

Query: 88  AAISLARIRRLYYGA--SNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
            AI  + I R+  GA  S+ +  G + G          H P  +     QR  ++ +D  
Sbjct: 121 GAIPWSGIERVVIGARDSDVRAIGFDEG----------HKPADWIAGYAQRGIEVTRDLL 170

Query: 146 K 146
           +
Sbjct: 171 R 171


>gi|295692792|ref|YP_003601402.1| riboflavin biosynthesis protein ribd [Lactobacillus crispatus ST1]
 gi|295030898|emb|CBL50377.1| Riboflavin biosynthesis protein ribD [Lactobacillus crispatus ST1]
          Length = 352

 Score = 42.7 bits (99), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 43/135 (31%), Positives = 62/135 (45%), Gaps = 26/135 (19%)

Query: 1   MKKGNVFMSCALEEAQNA---ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57
           M+K   +M+ ALEEA+       +N + VGAV V N ++++   + +        HAE  
Sbjct: 1   MEKDTFYMNLALEEAKKGRYQTWKNPM-VGAVIVKNGQVLATGYHHHYGQN----HAE-- 53

Query: 58  AIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPK----G 107
             R     L+ E L    LYVTLEPC        C+  I  + I+R+  G  +P     G
Sbjct: 54  --RDAISKLTPEQLFNSTLYVTLEPCNHYGKQPPCSDLIIKSGIKRVVVGQIDPHKLVTG 111

Query: 108 GGI----ENGTQFYT 118
            GI    +NG Q  T
Sbjct: 112 KGIAQLQKNGIQVTT 126


>gi|326941086|gb|AEA16982.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Bacillus
           thuringiensis serovar chinensis CT-43]
          Length = 365

 Score = 42.7 bits (99), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 45/156 (28%), Positives = 73/156 (46%), Gaps = 25/156 (16%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP----VGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56
           M +  ++M  ALE A+  A++ +      VG+V V +N+I+    +    +K    HAEI
Sbjct: 1   MLEHELYMKLALENAK--AMKGQTTPNPLVGSVIVNDNRIVGVGAH----MKAGEPHAEI 54

Query: 57  LAIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGI 110
            AIRM     + E      +YVTLEPC+       CA AI  A I+++     +P     
Sbjct: 55  HAIRM-----AGEQARGATIYVTLEPCSHYGRTGPCAEAIVQAGIKKVVVATLDPNPLVS 109

Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
             G +    A      E+  G+ E+ S+++ + F K
Sbjct: 110 GRGIKILQDAGI----EVLVGVCEEESKKMNEVFNK 141


>gi|218201691|gb|EEC84118.1| hypothetical protein OsI_30450 [Oryza sativa Indica Group]
          Length = 411

 Score = 42.7 bits (99), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 15/36 (41%), Positives = 23/36 (63%)

Query: 75  DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI 110
           D+Y+  EPC+MCA A+   R +R++Y   NP  G +
Sbjct: 338 DIYLVWEPCSMCAMALVHQRFKRIFYAFPNPITGAL 373


>gi|297192826|ref|ZP_06910224.1| cytidine/deoxycytidine deaminase [Streptomyces pristinaespiralis
           ATCC 25486]
 gi|197722375|gb|EDY66283.1| cytidine/deoxycytidine deaminase [Streptomyces pristinaespiralis
           ATCC 25486]
          Length = 149

 Score = 42.7 bits (99), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 29/106 (27%), Positives = 45/106 (42%), Gaps = 4/106 (3%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
             +++ A+ EA+       IP+GA     +  ++ R  NR  +  D +AHAE  A R   
Sbjct: 7   GTWLATAVAEARAGLAEGGIPIGAALYGADGTLLGRGHNRRVQDGDPSAHAETEAFRAAG 66

Query: 64  RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109
           R   Q       +  TL PC  C+  +    I R+  G +    GG
Sbjct: 67  R---QRSYRGTTMVTTLSPCWYCSGLVRQFGISRVVIGETETFHGG 109


>gi|152990173|ref|YP_001355895.1| riboflavin biosynthesis protein RibG [Nitratiruptor sp. SB155-2]
 gi|151422034|dbj|BAF69538.1| riboflavin biosynthesis protein RibG [Nitratiruptor sp. SB155-2]
          Length = 333

 Score = 42.7 bits (99), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 48/174 (27%), Positives = 70/174 (40%), Gaps = 39/174 (22%)

Query: 5   NVFMSCALEEAQN-AALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
           N FM  AL+EA     L    P VGAV  +NN IIS+  +     K    HAE+ AI+  
Sbjct: 6   NFFMDIALQEAWRYQGLTYPNPAVGAVVAINNCIISKGAHT----KAGAPHAEVEAIKNA 61

Query: 63  CRILS----------------------QEILPEVDLYVTLEPCTM------CAAAISLAR 94
              L+                      +++     +YVTLEPC        C+  I    
Sbjct: 62  YYTLTGDEHVLHLQDALELHEYLVANAKDLFHNATIYVTLEPCNHFGKTPPCSLLIKKLG 121

Query: 95  IRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKER 148
            +R+     +P       G  F  L  C    E+  GI E+R++ +I+ F + R
Sbjct: 122 FQRVVIALKDPNEEA-AGGASF--LRNC--GIEVDIGIQEERAKVLIEPFLQWR 170


>gi|115478038|ref|NP_001062614.1| Os09g0128600 [Oryza sativa Japonica Group]
 gi|50252596|dbj|BAD28768.1| cytidine/deoxycytidylate deaminase-like protein [Oryza sativa
           Japonica Group]
 gi|50252628|dbj|BAD28798.1| cytidine/deoxycytidylate deaminase-like protein [Oryza sativa
           Japonica Group]
 gi|113630847|dbj|BAF24528.1| Os09g0128600 [Oryza sativa Japonica Group]
 gi|215694768|dbj|BAG89959.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|222641086|gb|EEE69218.1| hypothetical protein OsJ_28439 [Oryza sativa Japonica Group]
          Length = 411

 Score = 42.7 bits (99), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 15/36 (41%), Positives = 23/36 (63%)

Query: 75  DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI 110
           D+Y+  EPC+MCA A+   R +R++Y   NP  G +
Sbjct: 338 DIYLVWEPCSMCAMALVHQRFKRIFYAFPNPITGAL 373


>gi|218232159|ref|YP_002368101.1| riboflavin biosynthesis protein RibD [Bacillus cereus B4264]
 gi|218160116|gb|ACK60108.1| riboflavin biosynthesis protein RibD [Bacillus cereus B4264]
          Length = 367

 Score = 42.7 bits (99), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 45/156 (28%), Positives = 74/156 (47%), Gaps = 25/156 (16%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP----VGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56
           M +  ++M  ALE A+  A++ +      VG+V V +N+I+    +    +K   +HAEI
Sbjct: 1   MLEHELYMKLALENAK--AMKGQTTPNPLVGSVIVNDNRIVGVGAH----MKAGESHAEI 54

Query: 57  LAIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGI 110
            AIRM     + E      +YVTLEPC+       CA AI  A I+++     +P     
Sbjct: 55  HAIRM-----AGEQARGGTIYVTLEPCSHHGRTGPCAEAIVQAGIKKVVVATLDPNPLVS 109

Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
             G +    A      E+  G+ E+ S+++ + F K
Sbjct: 110 GRGIKILQDAGI----EVLVGVCEEESKKMNEVFNK 141


>gi|311899518|dbj|BAJ31926.1| putative cytosine deaminase [Kitasatospora setae KM-6054]
          Length = 153

 Score = 42.7 bits (99), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 28/109 (25%), Positives = 46/109 (42%), Gaps = 4/109 (3%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIR 60
           ++   ++  AL EA+       IP+GA     + +++ R  NR  +  D + HAE  A R
Sbjct: 8   EQARAWLDVALAEAETGLAEGGIPIGAALFRRDGELLGRGHNRRVQDGDPSMHAETSAFR 67

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109
              R+       +  +  TL PC  C+  +    I  +  G S    GG
Sbjct: 68  AAGRLRGYR---DTVMVTTLSPCWYCSGLVRQFGIGHVVIGESTTFTGG 113


>gi|239617610|ref|YP_002940932.1| riboflavin biosynthesis protein RibD [Kosmotoga olearia TBF 19.5.1]
 gi|239506441|gb|ACR79928.1| riboflavin biosynthesis protein RibD [Kosmotoga olearia TBF 19.5.1]
          Length = 345

 Score = 42.4 bits (98), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 53/161 (32%), Positives = 68/161 (42%), Gaps = 44/161 (27%)

Query: 7   FMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRA-----GNRNRELKDVTAHAEILAI 59
           FM  A+EEA+    L N  P VGAV V N KI+S       G R         HAEI+AI
Sbjct: 5   FMELAIEEARKGEGLVNPNPLVGAVIVKNGKILSTGYHEYFGGR---------HAEIVAI 55

Query: 60  ----RMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPK--- 106
               +MG  I   EI      YVTLEPC        C   I       +Y G  +P    
Sbjct: 56  ENAKKMGYDIKGAEI------YVTLEPCVHYGKTPPCTDRIIREGFSAVYIGTLDPNPMV 109

Query: 107 -GGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
            G G E   +      C     +  GI E +++++I+ F K
Sbjct: 110 HGKGEE---KLKNAGIC-----VKHGILEVKAKELIEVFAK 142


>gi|20091176|ref|NP_617251.1| cytosine deaminase [Methanosarcina acetivorans C2A]
 gi|19916284|gb|AAM05731.1| cytosine deaminase [Methanosarcina acetivorans C2A]
          Length = 189

 Score = 42.4 bits (98), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 28/97 (28%), Positives = 43/97 (44%), Gaps = 6/97 (6%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNN--KIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           FM  A+  AQ +      P+G V + NN  +I+ +  N   +  D   H E  AIR   R
Sbjct: 44  FMRIAVLLAQKSYDEGGCPIGGVIIDNNTRRIVGKGHNTLVQDNDPYNHGETSAIRDAGR 103

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
               +      ++ TL PC +CA  I + +  R+  G
Sbjct: 104 ----QDFSNTTIFTTLSPCDVCATLIYMRQFDRVVVG 136


>gi|67078030|ref|YP_245650.1| riboflavin biosynthesis protein
           (diaminohydroxyphosphoribosylaminopyrimidine deaminase
           (riboflavin-specific deaminase) and
           5-amino-6-(5-phosphoribosylamino)uracil reductase)
           [Bacillus cereus E33L]
 gi|66970336|gb|AAY60312.1| riboflavin biosynthesis protein
           (diaminohydroxyphosphoribosylaminopyrimidine deaminase
           (riboflavin-specific deaminase) and
           5-amino-6-(5-phosphoribosylamino)uracil reductase)
           [Bacillus cereus E33L]
          Length = 367

 Score = 42.4 bits (98), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 45/156 (28%), Positives = 74/156 (47%), Gaps = 25/156 (16%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP----VGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56
           M +  ++M  ALE A+  A++ +      VG+V V +N+I+    +    +K    HAEI
Sbjct: 1   MLEHELYMKLALENAK--AMKGQTTPNPLVGSVIVNDNRIVGIGAH----MKAGEPHAEI 54

Query: 57  LAIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGI 110
            AIRM     + E      +YVTLEPC+       CA AI  A I+++     +P     
Sbjct: 55  HAIRM-----AGEQARGGTIYVTLEPCSHHGRTGPCAEAIVQAGIKKVVVATLDPNPLVS 109

Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
             G +    A      E+  G+ E++S+++ + F K
Sbjct: 110 GRGIKILQDAGI----EVLVGVCEEKSKKMNEVFNK 141


>gi|118580019|ref|YP_901269.1| riboflavin biosynthesis protein RibD [Pelobacter propionicus DSM
           2379]
 gi|118502729|gb|ABK99211.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Pelobacter
           propionicus DSM 2379]
          Length = 367

 Score = 42.4 bits (98), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 39/132 (29%), Positives = 61/132 (46%), Gaps = 27/132 (20%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85
           VG V V +  I+    +R    K  T+HAEI A+ M     + E     D++VTLEPC  
Sbjct: 28  VGCVIVKDGVIVGTGWHR----KAGTSHAEIHALEM-----AGESARGADVFVTLEPCCH 78

Query: 86  ------CAAAISLARIRRLYYGASNP----KGGGIENGTQFYTLATCHHSPEIYPGISEQ 135
                 C+ A+  A +RR+  G S+P     GGG+    +  T        ++  G+ E+
Sbjct: 79  TGKTPPCSQALIRAGVRRVVAGMSDPNPRVSGGGL---AELETAGI-----QVVCGVLEK 130

Query: 136 RSRQIIQDFFKE 147
             R + + F K+
Sbjct: 131 ECRDLNRPFIKQ 142


>gi|262038723|ref|ZP_06012083.1| riboflavin biosynthesis protein RibD [Leptotrichia goodfellowii
           F0264]
 gi|261747275|gb|EEY34754.1| riboflavin biosynthesis protein RibD [Leptotrichia goodfellowii
           F0264]
          Length = 382

 Score = 42.4 bits (98), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 43/117 (36%), Positives = 54/117 (46%), Gaps = 21/117 (17%)

Query: 7   FMSCALEEAQNAALR-NEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           +M  ALE A+    R N  P VGAV V N KII    ++        AHAE+ AI     
Sbjct: 21  YMKMALELAKKGIGRVNPNPLVGAVIVKNGKIIGEGYHKMFG----EAHAEVHAIEN--- 73

Query: 65  ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPK----GGGIE 111
             + E      +YVTLEPC+       CA  I  A I+R   G+ +P     G GIE
Sbjct: 74  --AGEETKNATIYVTLEPCSHYGKTPPCAEKIIKAGIKRCVIGSGDPNPEVAGKGIE 128


>gi|215405109|ref|ZP_03417290.1| hypothetical protein Mtub0_15737 [Mycobacterium tuberculosis
           02_1987]
 gi|215412978|ref|ZP_03421679.1| hypothetical protein Mtub9_16461 [Mycobacterium tuberculosis
           94_M4241A]
 gi|215428566|ref|ZP_03426485.1| hypothetical protein MtubT9_20149 [Mycobacterium tuberculosis T92]
 gi|215432070|ref|ZP_03429989.1| hypothetical protein MtubE_15680 [Mycobacterium tuberculosis
           EAS054]
 gi|215447396|ref|ZP_03434148.1| hypothetical protein MtubT_16158 [Mycobacterium tuberculosis T85]
 gi|219559156|ref|ZP_03538232.1| hypothetical protein MtubT1_18372 [Mycobacterium tuberculosis T17]
          Length = 187

 Score = 42.4 bits (98), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 35/101 (34%), Positives = 49/101 (48%), Gaps = 11/101 (10%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIIS--RAGNRNRELKDVTAHAEILAIRMGCRI 65
           +  A+E A + A     P GA A+L+   +     GN   E  D  AHAE   +R     
Sbjct: 32  IEAAMELAIDTARHATAPFGA-ALLDVTTLRAFSGGNTYFESGDRFAHAETNVLRA---- 86

Query: 66  LSQEILPEVDLYV---TLEPCTMCAAAISLARIRRLYYGAS 103
            +   LPE+  +V   T EPC MCAAA  L+ +R + +G S
Sbjct: 87  -AMSTLPELSNHVLISTAEPCPMCAAASVLSGVRAIIFGTS 126


>gi|15610251|ref|NP_217630.1| hypothetical protein Rv3114 [Mycobacterium tuberculosis H37Rv]
 gi|148662968|ref|YP_001284491.1| hypothetical protein MRA_3146 [Mycobacterium tuberculosis H37Ra]
 gi|148824307|ref|YP_001289061.1| hypothetical protein TBFG_13134 [Mycobacterium tuberculosis F11]
 gi|253800146|ref|YP_003033147.1| hypothetical protein TBMG_03158 [Mycobacterium tuberculosis KZN
           1435]
 gi|289555386|ref|ZP_06444596.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 605]
 gi|289763297|ref|ZP_06522675.1| cytosine/adenosine deaminase [Mycobacterium tuberculosis GM 1503]
 gi|297635752|ref|ZP_06953532.1| hypothetical protein MtubK4_16592 [Mycobacterium tuberculosis KZN
           4207]
 gi|297732750|ref|ZP_06961868.1| hypothetical protein MtubKR_16752 [Mycobacterium tuberculosis KZN
           R506]
 gi|313660083|ref|ZP_07816963.1| hypothetical protein MtubKV_16757 [Mycobacterium tuberculosis KZN
           V2475]
 gi|2076689|emb|CAB08371.1| CONSERVED HYPOTHETICAL PROTEIN [Mycobacterium tuberculosis H37Rv]
 gi|148507120|gb|ABQ74929.1| conserved hypothetical protein [Mycobacterium tuberculosis H37Ra]
 gi|148722834|gb|ABR07459.1| conserved hypothetical protein [Mycobacterium tuberculosis F11]
 gi|253321649|gb|ACT26252.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN
           1435]
 gi|289440018|gb|EFD22511.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 605]
 gi|289710803|gb|EFD74819.1| cytosine/adenosine deaminase [Mycobacterium tuberculosis GM 1503]
 gi|328459884|gb|AEB05307.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN
           4207]
          Length = 176

 Score = 42.4 bits (98), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 35/98 (35%), Positives = 48/98 (48%), Gaps = 11/98 (11%)

Query: 11  ALEEAQNAALRNEIPVGAVAVLNNKIIS--RAGNRNRELKDVTAHAEILAIRMGCRILSQ 68
           A+E A + A     P GA A+L+   +     GN   E  D  AHAE   +R      + 
Sbjct: 24  AMELAIDTARHATAPFGA-ALLDVTTLRAFSGGNTYFESGDRFAHAETNVLRA-----AM 77

Query: 69  EILPEVDLYV---TLEPCTMCAAAISLARIRRLYYGAS 103
             LPE+  +V   T EPC MCAAA  L+ +R + +G S
Sbjct: 78  STLPELSNHVLISTAEPCPMCAAASVLSGVRAIIFGTS 115


>gi|31794293|ref|NP_856786.1| hypothetical protein Mb3141 [Mycobacterium bovis AF2122/97]
 gi|121638999|ref|YP_979223.1| hypothetical protein BCG_3139 [Mycobacterium bovis BCG str. Pasteur
           1173P2]
 gi|224991491|ref|YP_002646180.1| hypothetical protein JTY_3134 [Mycobacterium bovis BCG str. Tokyo
           172]
 gi|260188150|ref|ZP_05765624.1| hypothetical protein MtubCP_19308 [Mycobacterium tuberculosis
           CPHL_A]
 gi|260202256|ref|ZP_05769747.1| hypothetical protein MtubT4_19746 [Mycobacterium tuberculosis T46]
 gi|260206449|ref|ZP_05773940.1| hypothetical protein MtubK8_19337 [Mycobacterium tuberculosis K85]
 gi|289444678|ref|ZP_06434422.1| conserved hypothetical protein [Mycobacterium tuberculosis T46]
 gi|289448793|ref|ZP_06438537.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A]
 gi|289571322|ref|ZP_06451549.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
 gi|289575826|ref|ZP_06456053.1| conserved hypothetical protein [Mycobacterium tuberculosis K85]
 gi|289746924|ref|ZP_06506302.1| cytidine and deoxycytidylate deaminase [Mycobacterium tuberculosis
           02_1987]
 gi|289751790|ref|ZP_06511168.1| conserved hypothetical protein [Mycobacterium tuberculosis T92]
 gi|289755233|ref|ZP_06514611.1| cytidine and deoxycytidylate deaminase [Mycobacterium tuberculosis
           EAS054]
 gi|289759241|ref|ZP_06518619.1| cytidine and deoxycytidylate deaminase [Mycobacterium tuberculosis
           T85]
 gi|294993219|ref|ZP_06798910.1| hypothetical protein Mtub2_01607 [Mycobacterium tuberculosis 210]
 gi|298526587|ref|ZP_07013996.1| conserved hypothetical protein [Mycobacterium tuberculosis
           94_M4241A]
 gi|31619888|emb|CAD96828.1| CONSERVED HYPOTHETICAL PROTEIN [Mycobacterium bovis AF2122/97]
 gi|121494647|emb|CAL73128.1| Conserved hypothetical protein [Mycobacterium bovis BCG str.
           Pasteur 1173P2]
 gi|224774606|dbj|BAH27412.1| hypothetical protein JTY_3134 [Mycobacterium bovis BCG str. Tokyo
           172]
 gi|289417597|gb|EFD14837.1| conserved hypothetical protein [Mycobacterium tuberculosis T46]
 gi|289421751|gb|EFD18952.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A]
 gi|289540257|gb|EFD44835.1| conserved hypothetical protein [Mycobacterium tuberculosis K85]
 gi|289545076|gb|EFD48724.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
 gi|289687452|gb|EFD54940.1| cytidine and deoxycytidylate deaminase [Mycobacterium tuberculosis
           02_1987]
 gi|289692377|gb|EFD59806.1| conserved hypothetical protein [Mycobacterium tuberculosis T92]
 gi|289695820|gb|EFD63249.1| cytidine and deoxycytidylate deaminase [Mycobacterium tuberculosis
           EAS054]
 gi|289714805|gb|EFD78817.1| cytidine and deoxycytidylate deaminase [Mycobacterium tuberculosis
           T85]
 gi|298496381|gb|EFI31675.1| conserved hypothetical protein [Mycobacterium tuberculosis
           94_M4241A]
 gi|326902663|gb|EGE49596.1| hypothetical protein TBPG_00512 [Mycobacterium tuberculosis W-148]
          Length = 176

 Score = 42.4 bits (98), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 35/98 (35%), Positives = 48/98 (48%), Gaps = 11/98 (11%)

Query: 11  ALEEAQNAALRNEIPVGAVAVLNNKIIS--RAGNRNRELKDVTAHAEILAIRMGCRILSQ 68
           A+E A + A     P GA A+L+   +     GN   E  D  AHAE   +R      + 
Sbjct: 24  AMELAIDTARHATAPFGA-ALLDVTTLRAFSGGNTYFESGDRFAHAETNVLRA-----AM 77

Query: 69  EILPEVDLYV---TLEPCTMCAAAISLARIRRLYYGAS 103
             LPE+  +V   T EPC MCAAA  L+ +R + +G S
Sbjct: 78  STLPELSNHVLISTAEPCPMCAAASVLSGVRAIIFGTS 115


>gi|196037929|ref|ZP_03105239.1| riboflavin biosynthesis protein RibD [Bacillus cereus NVH0597-99]
 gi|196031199|gb|EDX69796.1| riboflavin biosynthesis protein RibD [Bacillus cereus NVH0597-99]
          Length = 367

 Score = 42.4 bits (98), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 45/156 (28%), Positives = 74/156 (47%), Gaps = 25/156 (16%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP----VGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56
           M +  ++M  ALE A+  A++ +      VG+V V +N+I+    +    +K    HAEI
Sbjct: 1   MLEHELYMKLALENAK--AMKGQTTPNPLVGSVIVNDNRIVGIGAH----MKAGEPHAEI 54

Query: 57  LAIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGI 110
            AIRM     + E      +YVTLEPC+       CA AI  A I+++     +P     
Sbjct: 55  HAIRM-----AGEQARGGTIYVTLEPCSHHGRTGPCAEAIVQAGIKKVVVATLDPNPLVS 109

Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
             G +    A      E+  G+ E++S+++ + F K
Sbjct: 110 GRGIKILQDAGI----EVLVGVCEEKSKKMNEVFNK 141


>gi|206969393|ref|ZP_03230348.1| riboflavin biosynthesis protein RibD [Bacillus cereus AH1134]
 gi|206736434|gb|EDZ53592.1| riboflavin biosynthesis protein RibD [Bacillus cereus AH1134]
          Length = 367

 Score = 42.4 bits (98), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 45/156 (28%), Positives = 73/156 (46%), Gaps = 25/156 (16%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP----VGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56
           M +  ++M  ALE A+  A++ +      VG+V V +N+I+    +    +K    HAEI
Sbjct: 1   MLEHELYMKLALENAK--AMKGQTTPNPLVGSVIVNDNRIVGVGAH----MKAGEPHAEI 54

Query: 57  LAIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGI 110
            AIRM     + E      +YVTLEPC+       CA AI  A I+++     +P     
Sbjct: 55  HAIRM-----AGEQARGGTIYVTLEPCSHHGRTGPCAGAIVQAGIKKVVVATLDPNPLVS 109

Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
             G +    A      E+  G+ E+ S+++ + F K
Sbjct: 110 GRGIKILQDAGI----EVLVGVCEEESKKMNEVFNK 141


>gi|53711798|ref|YP_097790.1| riboflavin biosynthesis protein RibD [Bacteroides fragilis YCH46]
 gi|52214663|dbj|BAD47256.1| riboflavin biosynthesis protein RibD [Bacteroides fragilis YCH46]
          Length = 340

 Score = 42.4 bits (98), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 38/126 (30%), Positives = 55/126 (43%), Gaps = 17/126 (13%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85
           VGAV V   +II         ++   AHAE+ AIR    +    +L    +YV+LEPC+ 
Sbjct: 21  VGAVIVCEGQIIGEG----YHIRCGEAHAEVNAIR---SVKDPSLLKHSTIYVSLEPCSH 73

Query: 86  ------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139
                 CA  I   +I R+  G  +P       G Q    A C    E+  G+ E   R+
Sbjct: 74  HGKTPPCADLIIEKQIPRIVIGCQDPFSKVAGKGIQKLRDAGC----EVIVGVLETECRE 129

Query: 140 IIQDFF 145
           +I+ F 
Sbjct: 130 LIRKFI 135


>gi|15842685|ref|NP_337722.1| hypothetical protein MT3196 [Mycobacterium tuberculosis CDC1551]
 gi|167969723|ref|ZP_02552000.1| cytidine and deoxycytidylate deaminase family protein
           [Mycobacterium tuberculosis H37Ra]
 gi|218754887|ref|ZP_03533683.1| hypothetical protein MtubG1_16264 [Mycobacterium tuberculosis GM
           1503]
 gi|254233738|ref|ZP_04927063.1| conserved hypothetical protein [Mycobacterium tuberculosis C]
 gi|254365742|ref|ZP_04981787.1| conserved hypothetical protein [Mycobacterium tuberculosis str.
           Haarlem]
 gi|254552197|ref|ZP_05142644.1| hypothetical protein Mtube_17378 [Mycobacterium tuberculosis
           '98-R604 INH-RIF-EM']
 gi|308406055|ref|ZP_07494962.2| putative cytidine and deoxycytidylate deaminase zinc-binding region
           [Mycobacterium tuberculosis SUMu012]
 gi|13883005|gb|AAK47536.1| cytidine and deoxycytidylate deaminase family protein
           [Mycobacterium tuberculosis CDC1551]
 gi|124599267|gb|EAY58371.1| conserved hypothetical protein [Mycobacterium tuberculosis C]
 gi|134151255|gb|EBA43300.1| conserved hypothetical protein [Mycobacterium tuberculosis str.
           Haarlem]
 gi|308364666|gb|EFP53517.1| putative cytidine and deoxycytidylate deaminase zinc-binding region
           [Mycobacterium tuberculosis SUMu012]
 gi|323718345|gb|EGB27523.1| hypothetical protein TMMG_02246 [Mycobacterium tuberculosis
           CDC1551A]
          Length = 187

 Score = 42.4 bits (98), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 35/101 (34%), Positives = 49/101 (48%), Gaps = 11/101 (10%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIIS--RAGNRNRELKDVTAHAEILAIRMGCRI 65
           +  A+E A + A     P GA A+L+   +     GN   E  D  AHAE   +R     
Sbjct: 32  IEAAMELAIDTARHATAPFGA-ALLDVTTLRAFSGGNTYFESGDRFAHAETNVLRA---- 86

Query: 66  LSQEILPEVDLYV---TLEPCTMCAAAISLARIRRLYYGAS 103
            +   LPE+  +V   T EPC MCAAA  L+ +R + +G S
Sbjct: 87  -AMSTLPELSNHVLISTAEPCPMCAAASVLSGVRAIIFGTS 126


>gi|296166141|ref|ZP_06848586.1| cytosine deaminase [Mycobacterium parascrofulaceum ATCC BAA-614]
 gi|295898550|gb|EFG78111.1| cytosine deaminase [Mycobacterium parascrofulaceum ATCC BAA-614]
          Length = 150

 Score = 42.4 bits (98), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 31/104 (29%), Positives = 44/104 (42%), Gaps = 4/104 (3%)

Query: 7   FMSCALEEAQNAALRNEIPVG-AVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
            M  AL+EA+       IP+G A+   +  ++ R  NR  +  D + HAE+ A R   R 
Sbjct: 8   MMDVALDEARAGLAEGGIPIGAALFTADGVLLGRGRNRRVQRGDPSLHAEVDAFRAAGR- 66

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109
             Q       +  TL PC  C+  +    I  L  G S    GG
Sbjct: 67  --QRDYRSTVMVTTLAPCWYCSGLVRQFNIGSLLVGESRTFTGG 108


>gi|265765179|ref|ZP_06093454.1| riboflavin biosynthesis protein RibD [Bacteroides sp. 2_1_16]
 gi|263254563|gb|EEZ25997.1| riboflavin biosynthesis protein RibD [Bacteroides sp. 2_1_16]
          Length = 340

 Score = 42.4 bits (98), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 38/126 (30%), Positives = 55/126 (43%), Gaps = 17/126 (13%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85
           VGAV V   +II         ++   AHAE+ AIR    +    +L    +YV+LEPC+ 
Sbjct: 21  VGAVIVCEGQIIGEG----YHIRCGEAHAEVNAIR---SVKDPSLLKHSTIYVSLEPCSH 73

Query: 86  ------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139
                 CA  I   +I R+  G  +P       G Q    A C    E+  G+ E   R+
Sbjct: 74  HGKTPPCADLIIEKQIPRIVIGCQDPFSKVAGKGIQKLRDAGC----EVIVGVLETECRE 129

Query: 140 IIQDFF 145
           +I+ F 
Sbjct: 130 LIRKFI 135


>gi|60680029|ref|YP_210173.1| putative riboflavin biosynthesis protein [includes:
           diaminohydroxyphosphoribosylaminopyrimidine deaminase
           [Bacteroides fragilis NCTC 9343]
 gi|60491463|emb|CAH06213.1| putative riboflavin biosynthesis protein [includes:
           diaminohydroxyphosphoribosylaminopyrimidine deaminase
           [Bacteroides fragilis NCTC 9343]
          Length = 340

 Score = 42.4 bits (98), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 38/126 (30%), Positives = 55/126 (43%), Gaps = 17/126 (13%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85
           VGAV V   +II         ++   AHAE+ AIR    +    +L    +YV+LEPC+ 
Sbjct: 21  VGAVIVCEGQIIGEG----YHIRCGEAHAEVNAIR---SVKDPSLLKHSTIYVSLEPCSH 73

Query: 86  ------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139
                 CA  I   +I R+  G  +P       G Q    A C    E+  G+ E   R+
Sbjct: 74  HGKTPPCADLIIEKQIPRIVIGCQDPFSKVAGKGIQKLRDAGC----EVIVGVLETECRE 129

Query: 140 IIQDFF 145
           +I+ F 
Sbjct: 130 LIRKFI 135


>gi|330940147|ref|XP_003305924.1| hypothetical protein PTT_18900 [Pyrenophora teres f. teres 0-1]
 gi|311316849|gb|EFQ85984.1| hypothetical protein PTT_18900 [Pyrenophora teres f. teres 0-1]
          Length = 436

 Score = 42.4 bits (98), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 17/38 (44%), Positives = 25/38 (65%)

Query: 73  EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI 110
           ++D+Y+T EPC MC+ AI  +R RR  +G   P  GG+
Sbjct: 345 DLDIYLTNEPCVMCSMAILHSRFRRCIFGKRMPHTGGM 382


>gi|325680426|ref|ZP_08159976.1| riboflavin biosynthesis protein RibD [Ruminococcus albus 8]
 gi|324107864|gb|EGC02130.1| riboflavin biosynthesis protein RibD [Ruminococcus albus 8]
          Length = 369

 Score = 42.4 bits (98), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 39/112 (34%), Positives = 53/112 (47%), Gaps = 24/112 (21%)

Query: 7   FMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIIS-----RAGNRNRELKDVTAHAEILAI 59
           FM  AL+ A+N     N  P VGAV V + KII+     R G+ + E    +A A+    
Sbjct: 6   FMQAALDSAENGMGFVNPNPMVGAVIVRDGKIIASGFHERYGSLHAER---SAFAQCNKK 62

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP 105
            + C           D+YVTLEPC        C  AI+   IR +Y G+S+P
Sbjct: 63  GINC--------AGADMYVTLEPCCHHGKQPPCTEAIAAHGIRHVYIGSSDP 106


>gi|222055764|ref|YP_002538126.1| riboflavin biosynthesis protein RibD [Geobacter sp. FRC-32]
 gi|221565053|gb|ACM21025.1| riboflavin biosynthesis protein RibD [Geobacter sp. FRC-32]
          Length = 368

 Score = 42.4 bits (98), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 29/86 (33%), Positives = 43/86 (50%), Gaps = 15/86 (17%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85
           VG V V +  I+    +R    K  T HAEI A+R      +  +    D++VTLEPC+ 
Sbjct: 29  VGCVIVKDGAIVGEGWHR----KAGTPHAEIHALRQ-----AGALAEGADVFVTLEPCSH 79

Query: 86  ------CAAAISLARIRRLYYGASNP 105
                 CA A+  A++ R+Y G  +P
Sbjct: 80  FGKTPPCADALIAAKVARVYVGMVDP 105


>gi|86142849|ref|ZP_01061288.1| riboflavin biosynthesis protein RibD [Leeuwenhoekiella blandensis
           MED217]
 gi|85830881|gb|EAQ49339.1| riboflavin biosynthesis protein RibD [Leeuwenhoekiella blandensis
           MED217]
          Length = 343

 Score = 42.4 bits (98), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 41/147 (27%), Positives = 67/147 (45%), Gaps = 21/147 (14%)

Query: 8   MSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           MS  L+ A+N  L N  P   VG+V V  ++II    ++         HAE+ A+     
Sbjct: 1   MSRCLQLAKNG-LGNTYPNPMVGSVIVYEDRIIGEGWHQQAG----QPHAEVNAVN---S 52

Query: 65  ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
           +  Q +L +  +YV+LEPC+       C+  I    I+++  G  +P       G +   
Sbjct: 53  VNDQSLLDKATIYVSLEPCSHFGKTPPCSDLIIAKGIKKVVIGTVDPFAEVAGRGIKKLI 112

Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFF 145
            A C    E+  G+ EQ  +Q+ + FF
Sbjct: 113 DAGC----EVLVGVLEQECQQLNKRFF 135


>gi|308232338|ref|ZP_07415761.2| hypothetical protein TMAG_03287 [Mycobacterium tuberculosis
           SUMu001]
 gi|308369958|ref|ZP_07419664.2| hypothetical protein TMBG_03264 [Mycobacterium tuberculosis
           SUMu002]
 gi|308371237|ref|ZP_07424291.2| hypothetical protein TMCG_01530 [Mycobacterium tuberculosis
           SUMu003]
 gi|308372428|ref|ZP_07428645.2| hypothetical protein TMDG_03356 [Mycobacterium tuberculosis
           SUMu004]
 gi|308373631|ref|ZP_07433119.2| hypothetical protein TMEG_02388 [Mycobacterium tuberculosis
           SUMu005]
 gi|308374775|ref|ZP_07437361.2| hypothetical protein TMFG_00317 [Mycobacterium tuberculosis
           SUMu006]
 gi|308375992|ref|ZP_07445762.2| hypothetical protein TMGG_02655 [Mycobacterium tuberculosis
           SUMu007]
 gi|308377225|ref|ZP_07441571.2| hypothetical protein TMHG_02325 [Mycobacterium tuberculosis
           SUMu008]
 gi|308378194|ref|ZP_07481857.2| hypothetical protein TMIG_02622 [Mycobacterium tuberculosis
           SUMu009]
 gi|308379415|ref|ZP_07486201.2| hypothetical protein TMJG_03286 [Mycobacterium tuberculosis
           SUMu010]
 gi|308380574|ref|ZP_07490420.2| hypothetical protein TMKG_02361 [Mycobacterium tuberculosis
           SUMu011]
 gi|308214311|gb|EFO73710.1| hypothetical protein TMAG_03287 [Mycobacterium tuberculosis
           SUMu001]
 gi|308325963|gb|EFP14814.1| hypothetical protein TMBG_03264 [Mycobacterium tuberculosis
           SUMu002]
 gi|308329489|gb|EFP18340.1| hypothetical protein TMCG_01530 [Mycobacterium tuberculosis
           SUMu003]
 gi|308333335|gb|EFP22186.1| hypothetical protein TMDG_03356 [Mycobacterium tuberculosis
           SUMu004]
 gi|308336989|gb|EFP25840.1| hypothetical protein TMEG_02388 [Mycobacterium tuberculosis
           SUMu005]
 gi|308340803|gb|EFP29654.1| hypothetical protein TMFG_00317 [Mycobacterium tuberculosis
           SUMu006]
 gi|308344671|gb|EFP33522.1| hypothetical protein TMGG_02655 [Mycobacterium tuberculosis
           SUMu007]
 gi|308348621|gb|EFP37472.1| hypothetical protein TMHG_02325 [Mycobacterium tuberculosis
           SUMu008]
 gi|308353346|gb|EFP42197.1| hypothetical protein TMIG_02622 [Mycobacterium tuberculosis
           SUMu009]
 gi|308357180|gb|EFP46031.1| hypothetical protein TMJG_03286 [Mycobacterium tuberculosis
           SUMu010]
 gi|308361131|gb|EFP49982.1| hypothetical protein TMKG_02361 [Mycobacterium tuberculosis
           SUMu011]
          Length = 161

 Score = 42.4 bits (98), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 35/98 (35%), Positives = 48/98 (48%), Gaps = 11/98 (11%)

Query: 11  ALEEAQNAALRNEIPVGAVAVLNNKIIS--RAGNRNRELKDVTAHAEILAIRMGCRILSQ 68
           A+E A + A     P GA A+L+   +     GN   E  D  AHAE   +R      + 
Sbjct: 9   AMELAIDTARHATAPFGA-ALLDVTTLRAFSGGNTYFESGDRFAHAETNVLRA-----AM 62

Query: 69  EILPEVDLYV---TLEPCTMCAAAISLARIRRLYYGAS 103
             LPE+  +V   T EPC MCAAA  L+ +R + +G S
Sbjct: 63  STLPELSNHVLISTAEPCPMCAAASVLSGVRAIIFGTS 100


>gi|145499399|ref|XP_001435685.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124402819|emb|CAK68288.1| unnamed protein product [Paramecium tetraurelia]
          Length = 256

 Score = 42.4 bits (98), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 18/53 (33%), Positives = 27/53 (50%)

Query: 73  EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           E+ L +  EPC MCA A+  +RI+ +YY       GG+ +  Q   L   +H 
Sbjct: 197 EMTLVIYFEPCIMCAMALVHSRIKEVYYYQKRVVDGGLNDQLQLNNLKQLNHK 249


>gi|152996717|ref|YP_001341552.1| zinc-binding CMP/dCMP deaminase [Marinomonas sp. MWYL1]
 gi|150837641|gb|ABR71617.1| CMP/dCMP deaminase zinc-binding [Marinomonas sp. MWYL1]
          Length = 158

 Score = 42.4 bits (98), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 20/55 (36%), Positives = 29/55 (52%)

Query: 49  DVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
           D+T HAE   +    +    + L +  +YV+ EPC MCA +   A + RL YG S
Sbjct: 53  DMTGHAERKLMTRASKAYRPDFLAKCTMYVSAEPCAMCAGSAYWAGLGRLVYGLS 107


>gi|311694330|gb|ADP97203.1| CMP/dCMP deaminase, zinc-binding protein [marine bacterium HP15]
          Length = 159

 Score = 42.4 bits (98), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 28/73 (38%), Positives = 37/73 (50%), Gaps = 1/73 (1%)

Query: 24  IPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEP 82
           +P  AV V  N  ++ +  N+  E  D TAHAEI AIR   R  +   L    L  + EP
Sbjct: 30  LPFSAVIVNQNGDVVGKGVNQVAEHLDCTAHAEIQAIRDASRNENSVSLKGTTLIASGEP 89

Query: 83  CTMCAAAISLARI 95
           C +C  AI +A I
Sbjct: 90  CALCYMAIRMAGI 102


>gi|291533443|emb|CBL06556.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase
           /5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Megamonas hypermegale ART12/1]
          Length = 360

 Score = 42.4 bits (98), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 45/150 (30%), Positives = 68/150 (45%), Gaps = 27/150 (18%)

Query: 8   MSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           M  A++ A NA  R   P   VGAV V +N+++    +R       T HAE+ A+     
Sbjct: 1   MRLAMQLAGNAIGRTS-PNPLVGAVIVKDNRVVGCGWHREAG----TPHAEVHALNQ--- 52

Query: 65  ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYG--ASNPKGGGIENGTQF 116
             + E+    D+YVTLEPC        C+ A+  A+++ +Y G    NPK  G   G + 
Sbjct: 53  --AGELAQGADVYVTLEPCAHYGKTPPCSKALVEAKVKNVYGGLLDVNPKVAG--KGFKI 108

Query: 117 YTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
              A  H    +  G  +   R+  + FFK
Sbjct: 109 LEDAGIH----VEYGFLQDELRKQNEVFFK 134


>gi|153808975|ref|ZP_01961643.1| hypothetical protein BACCAC_03276 [Bacteroides caccae ATCC 43185]
 gi|149128308|gb|EDM19527.1| hypothetical protein BACCAC_03276 [Bacteroides caccae ATCC 43185]
          Length = 348

 Score = 42.4 bits (98), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 45/147 (30%), Positives = 67/147 (45%), Gaps = 21/147 (14%)

Query: 7   FMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
           +M   +E A+N  L N  P   VGAV V + +II    +    ++   AHAE+ AIR   
Sbjct: 6   YMRRCIELAKNG-LCNAAPNPMVGAVIVCDGRIIGEGYH----IRCGEAHAEVNAIR--- 57

Query: 64  RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFY 117
            +  + +L    +YV+LEPC+       CA  I   +I R+  G  +P       G Q  
Sbjct: 58  SVKDESLLKRSTIYVSLEPCSHYGKTPPCADLIIEKQIPRIVIGCQDPFSQVAGRGIQKL 117

Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDF 144
             A      E+  G+ E   RQ+I+ F
Sbjct: 118 KDA----GREVIVGVLESECRQLIRRF 140


>gi|264677369|ref|YP_003277275.1| CMP/dCMP deaminase, zinc-binding protein [Comamonas testosteroni
           CNB-2]
 gi|299533067|ref|ZP_07046453.1| CMP/dCMP deaminase, zinc-binding protein [Comamonas testosteroni
           S44]
 gi|262207881|gb|ACY31979.1| CMP/dCMP deaminase, zinc-binding protein [Comamonas testosteroni
           CNB-2]
 gi|298718952|gb|EFI59923.1| CMP/dCMP deaminase, zinc-binding protein [Comamonas testosteroni
           S44]
          Length = 170

 Score = 42.4 bits (98), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 29/89 (32%), Positives = 36/89 (40%), Gaps = 3/89 (3%)

Query: 15  AQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEV 74
           AQ A      P GAV V  ++        N    D   HAE    RM     + E L   
Sbjct: 29  AQRATQMGHHPFGAVLVGPDQETVLMEQCN---IDTVNHAESTLARMAATNYTAEFLWSC 85

Query: 75  DLYVTLEPCTMCAAAISLARIRRLYYGAS 103
            LY  +EPC MCA     A I R+ +G +
Sbjct: 86  TLYTNVEPCCMCAGTAYWANIGRIVFGMT 114


>gi|329956196|ref|ZP_08296876.1| riboflavin biosynthesis protein RibD [Bacteroides clarus YIT 12056]
 gi|328524670|gb|EGF51731.1| riboflavin biosynthesis protein RibD [Bacteroides clarus YIT 12056]
          Length = 347

 Score = 42.4 bits (98), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 46/147 (31%), Positives = 66/147 (44%), Gaps = 21/147 (14%)

Query: 7   FMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
           +M   ++ AQN  L N  P   VGAV V + KII    +    ++   AHAE+ AIR   
Sbjct: 6   YMRRCIQLAQNG-LCNAAPNPMVGAVVVCDGKIIGEGYH----VRCGEAHAEVNAIR--- 57

Query: 64  RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFY 117
            +    +L    +YV+LEPC+       CA  I   +I R+  G  +P       G Q  
Sbjct: 58  SVKEPSLLKRSTIYVSLEPCSHYGKTPPCADLIIEKQIPRIVIGCQDPFAKVAGRGIQKL 117

Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDF 144
             A      E+  G+ EQ  R +I+ F
Sbjct: 118 KDA----GREVTVGVLEQECRNLIRRF 140


>gi|50303913|ref|XP_451904.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
 gi|49641036|emb|CAH02297.1| KLLA0B08437p [Kluyveromyces lactis]
          Length = 152

 Score = 42.0 bits (97), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 41/102 (40%), Gaps = 6/102 (5%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAI 59
           KKG   M  A EEA        +P+G   +  L  +I+    N   +    T H E   +
Sbjct: 6   KKG---MDKAYEEAAIGYKEGGVPIGGCLIDNLTGEILGSGHNMRFQKGSPTLHGETSTL 62

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
               R L   +     +Y TL PC MC  AI L  I R+  G
Sbjct: 63  ENAGR-LKGSVYKHCTMYTTLSPCDMCTGAILLYGIGRVVVG 103


>gi|253564134|ref|ZP_04841591.1| riboflavin biosynthesis protein RibD [Bacteroides sp. 3_2_5]
 gi|251947910|gb|EES88192.1| riboflavin biosynthesis protein RibD [Bacteroides sp. 3_2_5]
 gi|301161570|emb|CBW21110.1| putative riboflavin biosynthesis protein [includes:
           diaminohydroxyphosphoribosylaminopyrimidine deaminase
           [Bacteroides fragilis 638R]
          Length = 340

 Score = 42.0 bits (97), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 38/126 (30%), Positives = 55/126 (43%), Gaps = 17/126 (13%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85
           VGAV V   +II         ++   AHAE+ AIR    +    +L    +YV+LEPC+ 
Sbjct: 21  VGAVIVCEGQIIGEG----YHIRCGEAHAEVNAIR---SVKDPSLLKHSTIYVSLEPCSH 73

Query: 86  ------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139
                 CA  I   +I R+  G  +P       G Q    A C    E+  G+ E   R+
Sbjct: 74  HGKTPPCADLIIEKQIPRIVIGCQDPFSKVAGKGIQKLRDAGC----EVIVGVLEPECRE 129

Query: 140 IIQDFF 145
           +I+ F 
Sbjct: 130 LIRKFI 135


>gi|302900034|ref|XP_003048181.1| hypothetical protein NECHADRAFT_93328 [Nectria haematococca mpVI
           77-13-4]
 gi|256729113|gb|EEU42468.1| hypothetical protein NECHADRAFT_93328 [Nectria haematococca mpVI
           77-13-4]
          Length = 166

 Score = 42.0 bits (97), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 35/127 (27%), Positives = 55/127 (43%), Gaps = 8/127 (6%)

Query: 11  ALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQE 69
           A+  A+ A    + P G+V V  + K++    NR     D T H E    R   + LS  
Sbjct: 13  AVSLAREALQAGDFPFGSVLVSASGKVLQTDRNRETTGSDSTLHPEFTLARWAEQNLSPT 72

Query: 70  ILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP--- 126
              E  +Y + E C MC+AA +   + R+ Y +S  + G   +    Y +     SP   
Sbjct: 73  ERAESTVYTSGEHCAMCSAAHAWCGLGRIVYASSTEQLGAWRD---EYGIGKSPVSPLSI 129

Query: 127 -EIYPGI 132
            ++ PGI
Sbjct: 130 QQVAPGI 136


>gi|229047052|ref|ZP_04192675.1| Riboflavin biosynthesis protein [Bacillus cereus AH676]
 gi|228724291|gb|EEL75625.1| Riboflavin biosynthesis protein [Bacillus cereus AH676]
          Length = 358

 Score = 42.0 bits (97), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 44/149 (29%), Positives = 70/149 (46%), Gaps = 25/149 (16%)

Query: 8   MSCALEEAQNAALRNEIP----VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
           M  ALE A+  A++ +      VG+V V +N+I+    +    +K    HAEI AIRM  
Sbjct: 1   MKLALENAK--AMKGQTTPNPLVGSVIVNDNRIVGVGAH----MKAGEPHAEIHAIRM-- 52

Query: 64  RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFY 117
              + E +    +YVTLEPC+       CA AI  A I+++     +P       G +  
Sbjct: 53  ---AGEQVRGATIYVTLEPCSHHGRTGPCAEAIVQAGIKKVVVATLDPNPLVSGRGIKIL 109

Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDFFK 146
             A      E+  G+ E+ S+++ + F K
Sbjct: 110 QDAGI----EVLVGVCEEESKKMNEVFNK 134


>gi|322420507|ref|YP_004199730.1| riboflavin biosynthesis protein RibD [Geobacter sp. M18]
 gi|320126894|gb|ADW14454.1| riboflavin biosynthesis protein RibD [Geobacter sp. M18]
          Length = 374

 Score = 42.0 bits (97), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 41/148 (27%), Positives = 65/148 (43%), Gaps = 21/148 (14%)

Query: 7   FMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
            M  AL EA+    +      VG V V + +++ +  ++    K  T HAE+ A+R    
Sbjct: 8   MMRLALSEARKGVGKTAPNPAVGCVIVRDGEVVGKGWHK----KAGTPHAEVHALRA--- 60

Query: 65  ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
             + E+    D YVTLEPC+       CA A+  AR+ R++    +P       G +   
Sbjct: 61  --AGELAAGADAYVTLEPCSHFGKTPPCARALIEARVGRVFVAMVDPNPLVSGRGIKMLQ 118

Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFK 146
            A      E+  G+ E  S +I + F K
Sbjct: 119 DAGI----EVEVGLLEAESLEINRPFVK 142


>gi|319957427|ref|YP_004168690.1| riboflavin biosynthesis protein ribd [Nitratifractor salsuginis DSM
           16511]
 gi|319419831|gb|ADV46941.1| riboflavin biosynthesis protein RibD [Nitratifractor salsuginis DSM
           16511]
          Length = 336

 Score = 42.0 bits (97), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 28/96 (29%), Positives = 48/96 (50%), Gaps = 19/96 (19%)

Query: 64  RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP---KGGGIENGT 114
           + + +E+   V LYVTLEPC        CA A+S   + R+    ++P    GGG+E   
Sbjct: 85  QTVPEELFRGVSLYVTLEPCAHHGRTPSCAWALSRFPLHRVVVATADPIPGHGGGLE--- 141

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF--FKER 148
                    H  E+  G+ E+ +R++++ F  ++ER
Sbjct: 142 -----ILADHGIEVATGVCEEEARELLEPFLIWQER 172


>gi|225159038|ref|ZP_03725347.1| riboflavin biosynthesis protein RibD [Opitutaceae bacterium TAV2]
 gi|224802351|gb|EEG20614.1| riboflavin biosynthesis protein RibD [Opitutaceae bacterium TAV2]
          Length = 388

 Score = 42.0 bits (97), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 37/108 (34%), Positives = 51/108 (47%), Gaps = 18/108 (16%)

Query: 7   FMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
           FM  AL  A+ A   N  P   VGA+ V +  +++   +     +D   HAE    R+  
Sbjct: 11  FMWQALALARRA-WGNTHPNPMVGAIIVEDGAVVAEGWH----ARDGGPHAE----RVAL 61

Query: 64  RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP 105
             L +   P   LYVTLEPC+       C  AI  A IRR+  GA++P
Sbjct: 62  TALGRAPKPGATLYVTLEPCSTHGRTGACCDAIIEAGIRRVVVGATDP 109


>gi|237809037|ref|YP_002893477.1| CMP/dCMP deaminase zinc-binding [Tolumonas auensis DSM 9187]
 gi|237501298|gb|ACQ93891.1| CMP/dCMP deaminase zinc-binding [Tolumonas auensis DSM 9187]
          Length = 203

 Score = 42.0 bits (97), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 34/118 (28%), Positives = 57/118 (48%), Gaps = 9/118 (7%)

Query: 8   MSCALEEAQNAALRNEI-PVGAVAVLNNK--IISRAGNRNRELKDVTAHAEILAIRMGCR 64
           M+ A+E A+   LR    P  ++ V      ++S   N+     + T H E++AI +G +
Sbjct: 42  MTLAIELARQNVLRGTGGPFASIIVHRQSGVLLSVGVNQVVAQNNSTLHGEVMAIMLGEQ 101

Query: 65  ILSQEIL----PEVDLYVTLEPCTMCAAAISLARIRRLYYGAS--NPKGGGIENGTQF 116
            L Q  L     E +L+ + EPC MC  AI  + ++RL   A+  + +  G + G  F
Sbjct: 102 RLQQFSLNSQSGEYELFTSCEPCAMCMGAILWSGVKRLVCAATGEDARAIGFDEGPVF 159


>gi|171779591|ref|ZP_02920547.1| hypothetical protein STRINF_01428 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
 gi|171281693|gb|EDT47127.1| hypothetical protein STRINF_01428 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
          Length = 351

 Score = 42.0 bits (97), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 39/110 (35%), Positives = 56/110 (50%), Gaps = 17/110 (15%)

Query: 5   NVFMSCALEEAQNA---ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           N +MS A+ EA+        N + VGAV V +N +I+R  +    L+    HAE  AI +
Sbjct: 3   NYYMSQAIAEAKKGFRQTYTNPL-VGAVIVKDNHVIARGAH----LQYGHEHAEKNAI-L 56

Query: 62  GCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP 105
            C+  + E L +  LYVTLEPC        C  AI  A I+++  G  +P
Sbjct: 57  HCQ--TPEELVDSTLYVTLEPCHHRGKQPPCTQAILAAGIKKVVVGQLDP 104


>gi|328872021|gb|EGG20391.1| hypothetical protein DFA_07515 [Dictyostelium fasciculatum]
          Length = 330

 Score = 42.0 bits (97), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 20/61 (32%), Positives = 32/61 (52%)

Query: 44  NRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
           N    ++ AH EI+AI+    I    +     +Y T EPC+MCA+AI  +R + + +   
Sbjct: 101 NTGKPNMIAHGEIVAIQNCTEIHGISMYTNYSIYTTGEPCSMCASAILWSRFKTVVWSTY 160

Query: 104 N 104
           N
Sbjct: 161 N 161


>gi|221068442|ref|ZP_03544547.1| CMP/dCMP deaminase zinc-binding [Comamonas testosteroni KF-1]
 gi|220713465|gb|EED68833.1| CMP/dCMP deaminase zinc-binding [Comamonas testosteroni KF-1]
          Length = 170

 Score = 42.0 bits (97), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 30/93 (32%), Positives = 38/93 (40%), Gaps = 3/93 (3%)

Query: 11  ALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEI 70
           A + AQ A      P GAV V  ++        N    D   HAE    RM     + E 
Sbjct: 25  AQDVAQRATQMGHHPFGAVLVGPDQETVLMEQCN---IDTVNHAESTLARMAATNYTAEF 81

Query: 71  LPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
           L    LY  +EPC MCA     A I R+ +G +
Sbjct: 82  LWGCTLYTNVEPCCMCAGTAYWANIGRIVFGMT 114


>gi|54401353|gb|AAV34447.1| predicted diaminohydroxyphosphoribosylaminopyrimidine deaminase
           [uncultured proteobacterium RedeBAC7D11]
          Length = 366

 Score = 42.0 bits (97), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 32/96 (33%), Positives = 45/96 (46%), Gaps = 13/96 (13%)

Query: 24  IPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEV---DLYVTL 80
           + VG V V +NKII R   +    K   +HAEI AI    +      L ++   DL+VTL
Sbjct: 25  VKVGCVIVKDNKIIGRGFYQ----KYGGSHAEINAINDVKKKYKTNYLSKLSGSDLFVTL 80

Query: 81  EPCTM------CAAAISLARIRRLYYGASNPKGGGI 110
           EPC+       C   +     +R+  GA +P   GI
Sbjct: 81  EPCSKKGKTGACVNELKKYDFKRIIVGAKDPTQSGI 116


>gi|152966031|ref|YP_001361815.1| cytosine deaminase [Kineococcus radiotolerans SRS30216]
 gi|151360548|gb|ABS03551.1| Cytosine deaminase [Kineococcus radiotolerans SRS30216]
          Length = 165

 Score = 42.0 bits (97), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 36/147 (24%), Positives = 56/147 (38%), Gaps = 21/147 (14%)

Query: 7   FMSCALEEAQNAALRNEIPVG-AVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
            +  ALE+A+  A    +P+G A+  L+  ++    NR  +  D + H E  A R   R 
Sbjct: 22  LLDVALEQARAGAAEGGVPIGAALFTLDGTLLGAGRNRRVQDDDPSVHGETDAFRNAGRR 81

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG----IENGTQFYTLAT 121
            S        +  TL PC  C+  +    I  L  G S    GG     E+G     L  
Sbjct: 82  ASYR---HTVMVTTLSPCWYCSGLVRQFGIGHLLVGESTTFTGGHAWLAEHGVSVTVL-- 136

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKER 148
                       + R R ++  F ++R
Sbjct: 137 -----------DDDRCRALMTTFIEQR 152


>gi|150864324|ref|XP_001383092.2| tRNA-specific adenosine-34 deaminase subunit [Scheffersomyces
           stipitis CBS 6054]
 gi|149385580|gb|ABN65063.2| tRNA-specific adenosine-34 deaminase subunit [Scheffersomyces
           stipitis CBS 6054]
          Length = 325

 Score = 42.0 bits (97), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 20/57 (35%), Positives = 29/57 (50%)

Query: 76  LYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGI 132
           ++ + EPC MC  A+  +RI RL Y  S+P  GG+E   Q       +   EI+  I
Sbjct: 248 VFSSHEPCVMCCMALVHSRISRLIYLRSSPSSGGLETNYQLGDREGLNWKFEIWKWI 304


>gi|54294122|ref|YP_126537.1| riboflavin biosynthesis protein RibD [Legionella pneumophila str.
          Lens]
 gi|53753954|emb|CAH15425.1| Riboflavin biosynthesis protein RibD [Legionella pneumophila str.
          Lens]
          Length = 357

 Score = 42.0 bits (97), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 34/79 (43%), Positives = 42/79 (53%), Gaps = 11/79 (13%)

Query: 7  FMSCALEEAQ--NAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
          F+  ALE+A+           VGAVAV N  II++A +R       T HAE L +    +
Sbjct: 5  FLLAALEQAKLGRGFCAPNPSVGAVAVQNGNIIAQAWHRGAG----TPHAEQLLLS---Q 57

Query: 65 ILSQEILPEVDLYVTLEPC 83
          IL Q   P V LYVTLEPC
Sbjct: 58 ILPQT--PGVTLYVTLEPC 74


>gi|315444248|ref|YP_004077127.1| cytosine/adenosine deaminase [Mycobacterium sp. Spyr1]
 gi|315262551|gb|ADT99292.1| cytosine/adenosine deaminase [Mycobacterium sp. Spyr1]
          Length = 159

 Score = 42.0 bits (97), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 29/94 (30%), Positives = 48/94 (51%), Gaps = 2/94 (2%)

Query: 12  LEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNR-ELKDVTAHAEILAIRMGCRILSQEI 70
           +E A+ A    + P G++ +L+   ++R  +RNR +  D T H E    +     LS + 
Sbjct: 15  VELAREAQEAGDEPFGSL-LLDADGVTRVEDRNRVKDGDATRHPEYAIAKWAVENLSPDD 73

Query: 71  LPEVDLYVTLEPCTMCAAAISLARIRRLYYGASN 104
                +Y + E CTMCAAA +   + R+ Y AS+
Sbjct: 74  RARATVYTSGEHCTMCAAAHAWVGLGRVVYAASS 107


>gi|294885496|ref|XP_002771343.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
 gi|239874872|gb|EER03159.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
          Length = 76

 Score = 42.0 bits (97), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 21/53 (39%), Positives = 30/53 (56%)

Query: 7  FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
          FM  AL  AQ A   +E+PVG   V N  +++ AGN     ++ T HAE++A 
Sbjct: 22 FMRLALAAAQEAYDTDEVPVGCAFVSNGVVLATAGNETNHTRNATRHAELVAT 74


>gi|330804193|ref|XP_003290082.1| hypothetical protein DICPUDRAFT_154567 [Dictyostelium purpureum]
 gi|325079791|gb|EGC33374.1| hypothetical protein DICPUDRAFT_154567 [Dictyostelium purpureum]
          Length = 321

 Score = 42.0 bits (97), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 19/61 (31%), Positives = 30/61 (49%)

Query: 44  NRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
           N    ++ +H EI+AI     +    +     LY T EPC MCA+A+  A  + + +G  
Sbjct: 98  NMGKPNIISHGEIVAINNCTAMHGITVFTNYTLYTTGEPCAMCASALLWADFKTIVWGTY 157

Query: 104 N 104
           N
Sbjct: 158 N 158


>gi|307609932|emb|CBW99459.1| riboflavin biosynthesis protein RibD [Legionella pneumophila
          130b]
          Length = 357

 Score = 42.0 bits (97), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 34/79 (43%), Positives = 42/79 (53%), Gaps = 11/79 (13%)

Query: 7  FMSCALEEAQ--NAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
          F+  ALE+A+           VGAVAV N  II++A +R       T HAE L +    +
Sbjct: 5  FLLAALEQAKLGRGFCAPNPSVGAVAVQNGNIIAQAWHRGAG----TPHAEQLLLS---Q 57

Query: 65 ILSQEILPEVDLYVTLEPC 83
          IL Q   P V LYVTLEPC
Sbjct: 58 ILPQT--PGVTLYVTLEPC 74


>gi|212703995|ref|ZP_03312123.1| hypothetical protein DESPIG_02048 [Desulfovibrio piger ATCC 29098]
 gi|212672588|gb|EEB33071.1| hypothetical protein DESPIG_02048 [Desulfovibrio piger ATCC 29098]
          Length = 188

 Score = 41.6 bits (96), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 32/95 (33%), Positives = 45/95 (47%), Gaps = 6/95 (6%)

Query: 8   MSCALEEAQNAALRNEI-PVGA-VAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M  A+E A+   L  +  P GA +     +++S A N     +D T HAE+ A+R     
Sbjct: 32  MLAAIEAAREGMLSGKGGPFGALITDPAGRVVSVACNEVLASRDCTMHAEVAALRK---- 87

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
           +    L    LY T  PC MC  AI  +R+  LYY
Sbjct: 88  VGHLDLRGHTLYATGFPCVMCLGAILWSRVSTLYY 122


>gi|254466662|ref|ZP_05080073.1| guanine deaminase [Rhodobacterales bacterium Y4I]
 gi|206687570|gb|EDZ48052.1| guanine deaminase [Rhodobacterales bacterium Y4I]
          Length = 164

 Score = 41.6 bits (96), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 37/123 (30%), Positives = 53/123 (43%), Gaps = 8/123 (6%)

Query: 11  ALEEAQNAALRNEIPVGA-VAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQE 69
           AL EA+ A     +P  A V   + +++    N   E  D TAHAE+ AIR  C    + 
Sbjct: 20  ALSEARVA--EGGVPFSAQVVSADGRVLGAGVNTVMEDHDPTAHAEVCAIRDACARHGRT 77

Query: 70  ILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGG--GIENGTQFYTLATCHHSPE 127
            L    L  + EPC +C  A   A +  + Y  S  +    G   GT +  L+     PE
Sbjct: 78  NLAGTVLLASGEPCALCYMAALFAGVSEVLYAVSADEAARYGYGYGTSYRLLSGF---PE 134

Query: 128 IYP 130
            +P
Sbjct: 135 HFP 137


>gi|29827131|ref|NP_821765.1| cytidine/deoxycytidine deaminase [Streptomyces avermitilis MA-4680]
 gi|29604229|dbj|BAC68300.1| putative cytidine/deoxycytidine deaminase [Streptomyces avermitilis
           MA-4680]
          Length = 145

 Score = 41.6 bits (96), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 30/102 (29%), Positives = 46/102 (45%), Gaps = 8/102 (7%)

Query: 15  AQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPE 73
           A +A    + P G++    +  I++ A N  R   D+ AH E+   R   R L+      
Sbjct: 17  AAHAVTLGDAPYGSLLTGPDGAILAEAHNTVRRDNDIAAHPELKLARWAARELAPAAAAR 76

Query: 74  VDLYVTLEPCTMCAAAISLARIRRLYYGAS-------NPKGG 108
             +Y + +PCTMCA  I  + I R+ Y  S       NP+ G
Sbjct: 77  TTMYTSCQPCTMCAGGIVRSGIGRVVYALSTEQLVELNPQSG 118


>gi|308174118|ref|YP_003920823.1| fused diaminohydroxyphosphoribosylaminopyrimidine deaminase;
           5-amino-6-(5-phosphoribosylamino) uracil reductase
           [Bacillus amyloliquefaciens DSM 7]
 gi|307606982|emb|CBI43353.1| fused diaminohydroxyphosphoribosylaminopyrimidine deaminase;
           5-amino-6-(5-phosphoribosylamino) uracil reductase
           [Bacillus amyloliquefaciens DSM 7]
 gi|328552752|gb|AEB23244.1| fused diaminohydroxyphosphoribosylaminopyrimidine deaminase;
           5-amino-6-(5-phosphoribosylamino) uracil reductase
           [Bacillus amyloliquefaciens TA208]
 gi|328912449|gb|AEB64045.1| fused diaminohydroxyphosphoribosylaminopyrimidine deaminase;
           5-amino-6-(5-phosphoribosylamino) uracil reductase
           [Bacillus amyloliquefaciens LL3]
          Length = 371

 Score = 41.6 bits (96), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 35/108 (32%), Positives = 52/108 (48%), Gaps = 19/108 (17%)

Query: 7   FMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
           +M+ A+E A+    + + P   VGAV V N +I+    +    L+   AHAE+ AI M  
Sbjct: 5   YMNTAIELARRGEGQTQ-PNPLVGAVVVKNGQIVGMGAH----LQYGEAHAEVHAINMAG 59

Query: 64  RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP 105
                      DLYVTLEPC+       CA  I  + I+R++    +P
Sbjct: 60  SHAKG-----ADLYVTLEPCSHYGKTPPCAELIMKSGIKRVFIAVEDP 102


>gi|238925477|ref|YP_002938994.1| riboflavin biosynthesis protein [Eubacterium rectale ATCC 33656]
 gi|238877153|gb|ACR76860.1| riboflavin biosynthesis protein [Eubacterium rectale ATCC 33656]
          Length = 394

 Score = 41.6 bits (96), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 39/108 (36%), Positives = 53/108 (49%), Gaps = 25/108 (23%)

Query: 26  VGAVAVLNNKIISRAGN-RNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84
           VGAV V + +II    + R  EL     HAE  A++  C+   Q      D+YVTLEPC 
Sbjct: 33  VGAVIVKDGRIIGEGWHERYGEL-----HAERNALKH-CKESPQG----ADMYVTLEPCC 82

Query: 85  M------CAAAISLARIRRLYYGASNPK----GGGI----ENGTQFYT 118
                  C  A+  A I+R+Y G+ +P     GGGI    E+G +  T
Sbjct: 83  HHGKQPPCVEAVIEAGIKRVYVGSDDPNPLVAGGGIKILKEHGIEVVT 130


>gi|82541649|ref|XP_725051.1| cytidine/deoxycytidylate deaminase [Plasmodium yoelii yoelii str.
           17XNL]
 gi|23479911|gb|EAA16616.1| Cytidine and deoxycytidylate deaminase zinc-binding region,
           putative [Plasmodium yoelii yoelii]
          Length = 378

 Score = 41.6 bits (96), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 17/59 (28%), Positives = 34/59 (57%)

Query: 77  YVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQ 135
           Y+T EPC MCA A+  +RI+ + +   N + G + +  + + L + +H  ++Y  + E+
Sbjct: 319 YLTHEPCFMCAMAMVHSRIKCVIFDKVNKENGALFSRGKLHCLKSLNHHFKVYKTVREK 377


>gi|299743335|ref|XP_001835696.2| hypothetical protein CC1G_07120 [Coprinopsis cinerea okayama7#130]
 gi|298405607|gb|EAU86041.2| hypothetical protein CC1G_07120 [Coprinopsis cinerea okayama7#130]
          Length = 480

 Score = 41.6 bits (96), Expect = 0.035,   Method: Composition-based stats.
 Identities = 20/58 (34%), Positives = 32/58 (55%)

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
           S  +L    +++T EPC MC+ A+  +R+R ++Y    PK GG  + T   TL   +H
Sbjct: 379 SNYLLTNQTIFLTHEPCIMCSMALLHSRVREVFYLYPMPKTGGCGSLTCLPTLKGVNH 436


>gi|91087043|ref|XP_974513.1| PREDICTED: similar to cytidine and deoxycytidylate deaminase
           zinc-binding region [Tribolium castaneum]
 gi|270010523|gb|EFA06971.1| hypothetical protein TcasGA2_TC009931 [Tribolium castaneum]
          Length = 317

 Score = 41.6 bits (96), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 19/63 (30%), Positives = 35/63 (55%), Gaps = 1/63 (1%)

Query: 76  LYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQ 135
           +Y T EPC  CA A+  +R +R++YG  + K G + +  + + +   +H  E + G+ E+
Sbjct: 255 VYCTTEPCITCAMALVHSRAKRVFYGVKSAK-GALGSLCKIHVVENLNHHYEAFSGLLEE 313

Query: 136 RSR 138
             R
Sbjct: 314 ECR 316


>gi|88799403|ref|ZP_01114981.1| hypothetical protein MED297_17393 [Reinekea sp. MED297]
 gi|88777942|gb|EAR09139.1| hypothetical protein MED297_17393 [Reinekea sp. MED297]
          Length = 161

 Score = 41.6 bits (96), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 28/76 (36%), Positives = 40/76 (52%), Gaps = 1/76 (1%)

Query: 24  IPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEP 82
           +P  A+ V  N +II +  N+  +  D TAHAEI AIR          L  + L V+ EP
Sbjct: 30  LPFAAIVVDQNGEIIGKGVNQVAKHLDCTAHAEIQAIREASGNEKTVSLKGMILIVSGEP 89

Query: 83  CTMCAAAISLARIRRL 98
           C +C  AI +A I ++
Sbjct: 90  CALCYMAIRMAEIMKV 105


>gi|326793664|ref|YP_004311484.1| CMP/dCMP deaminase zinc-binding protein [Marinomonas mediterranea
           MMB-1]
 gi|326544428|gb|ADZ89648.1| CMP/dCMP deaminase zinc-binding protein [Marinomonas mediterranea
           MMB-1]
          Length = 162

 Score = 41.6 bits (96), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 19/55 (34%), Positives = 29/55 (52%)

Query: 49  DVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
           D+T HAE   +    +    + L +  LY++ EPC MCA +   A + R+ YG S
Sbjct: 57  DMTGHAERKLMTRASKAYRPDFLAKCTLYISAEPCAMCAGSAYWAGVGRVVYGLS 111


>gi|145223166|ref|YP_001133844.1| CMP/dCMP deaminase, zinc-binding [Mycobacterium gilvum PYR-GCK]
 gi|145215652|gb|ABP45056.1| CMP/dCMP deaminase, zinc-binding protein [Mycobacterium gilvum
           PYR-GCK]
          Length = 146

 Score = 41.6 bits (96), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 29/104 (27%), Positives = 43/104 (41%), Gaps = 4/104 (3%)

Query: 7   FMSCALEEAQNAALRNEIPVG-AVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
            +  A+EEA+       IP+G A+   +  ++    NR  +L D + HAE  A R   R 
Sbjct: 6   MLDVAVEEARKGLAEGGIPIGAALFAADGTLLGSGHNRRVQLDDPSLHAETDAFRNAGR- 64

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109
             Q       +  TL PC  C+  +    I  +  G S    GG
Sbjct: 65  --QRGYRSTTMVTTLSPCWYCSGLVRQFNIGTVVIGESRTFTGG 106


>gi|312195390|ref|YP_004015451.1| CMP/dCMP deaminase zinc-binding protein [Frankia sp. EuI1c]
 gi|311226726|gb|ADP79581.1| CMP/dCMP deaminase zinc-binding protein [Frankia sp. EuI1c]
          Length = 154

 Score = 41.6 bits (96), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 28/77 (36%), Positives = 35/77 (45%), Gaps = 1/77 (1%)

Query: 25  PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84
           P GAV V  +       NR     D TAHAE +AIR+  +    + L    +  + EPC 
Sbjct: 26  PYGAVLVTADGQAVEERNRVVTTSDPTAHAESMAIRVAAKTWGID-LSGATMVASFEPCP 84

Query: 85  MCAAAISLARIRRLYYG 101
           MC  AI  A I  L  G
Sbjct: 85  MCCGAILEAGITVLAIG 101


>gi|301054889|ref|YP_003793100.1| riboflavin biosynthesis protein ribD [Bacillus anthracis CI]
 gi|300377058|gb|ADK05962.1| riboflavin biosynthesis protein ribD [Bacillus cereus biovar
           anthracis str. CI]
          Length = 367

 Score = 41.6 bits (96), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 45/156 (28%), Positives = 73/156 (46%), Gaps = 25/156 (16%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP----VGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56
           M +  ++M  ALE A+  A++ +      VG+V V +N+I+    +    +K    HAEI
Sbjct: 1   MLEHELYMKLALENAK--AMKGQTTPNPLVGSVIVNDNRIVGIGAH----MKAGEPHAEI 54

Query: 57  LAIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGI 110
            AIRM     + E      +YVTLEPC+       CA AI  A I+++     +P     
Sbjct: 55  HAIRM-----AGEQARGGTIYVTLEPCSHHGRTGPCAEAIVQAGIKKVVVATLDPNPLVS 109

Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
             G +    A      E+  G+ E+ S+++ + F K
Sbjct: 110 GRGIKILQDAGI----EVLVGVCEEESKKMNEVFNK 141


>gi|291524228|emb|CBK89815.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase
           /5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Eubacterium rectale DSM 17629]
          Length = 386

 Score = 41.6 bits (96), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 39/108 (36%), Positives = 53/108 (49%), Gaps = 25/108 (23%)

Query: 26  VGAVAVLNNKIISRAGN-RNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84
           VGAV V + +II    + R  EL     HAE  A++  C+   Q      D+YVTLEPC 
Sbjct: 27  VGAVIVKDGRIIGEGWHERYGEL-----HAERNALKH-CKESPQG----ADMYVTLEPCC 76

Query: 85  M------CAAAISLARIRRLYYGASNPK----GGGI----ENGTQFYT 118
                  C  A+  A I+R+Y G+ +P     GGGI    E+G +  T
Sbjct: 77  HHGKQPPCVEAVIEAGIKRVYVGSDDPNPLVAGGGIKILKEHGIEVVT 124


>gi|239624923|ref|ZP_04667954.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
 gi|239521309|gb|EEQ61175.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
          Length = 161

 Score = 41.6 bits (96), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 23/72 (31%), Positives = 31/72 (43%)

Query: 33  NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISL 92
              I+    N     KD TAH  +  +R      S   L E  +Y  +EPC MC  A+  
Sbjct: 38  EGDILMEQKNEAGTQKDPTAHDVMALVRRAVHEYSPGQLQECTVYALMEPCVMCMGALFW 97

Query: 93  ARIRRLYYGASN 104
           A+I R+ Y  S 
Sbjct: 98  AKIGRVKYAMSE 109


>gi|120434994|ref|YP_860680.1| bifunctional riboflavin biosynthesis protein RibD [Gramella
           forsetii KT0803]
 gi|117577144|emb|CAL65613.1| bifunctional riboflavin biosynthesis protein RibD [Gramella
           forsetii KT0803]
          Length = 347

 Score = 41.6 bits (96), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 42/148 (28%), Positives = 65/148 (43%), Gaps = 21/148 (14%)

Query: 7   FMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
           ++   +E AQN  L    P   VG+V V  NKII    ++    K    HAE+ AI    
Sbjct: 7   YIKRCIELAQNG-LGTTYPNPMVGSVIVYKNKIIGEGWHK----KAGEPHAEVNAIN--- 58

Query: 64  RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFY 117
            +  Q +L    +YV+LEPC+       C+  I    I+++  G  +P       G +  
Sbjct: 59  SVKDQSLLKHAIIYVSLEPCSHFGKTPPCSDLIIAKGIKKVIIGTMDPFAKVAGRGIKKL 118

Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDFF 145
             A C    E+  GI E+   ++ + FF
Sbjct: 119 MDAGC----EVNVGILEEECLELNKRFF 142


>gi|330796315|ref|XP_003286213.1| hypothetical protein DICPUDRAFT_30558 [Dictyostelium purpureum]
 gi|325083800|gb|EGC37243.1| hypothetical protein DICPUDRAFT_30558 [Dictyostelium purpureum]
          Length = 226

 Score = 41.6 bits (96), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 19/61 (31%), Positives = 29/61 (47%)

Query: 44  NRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
           N    ++ +H EI+AI     +    +     LY T EPC MCA A+  A  + + +G  
Sbjct: 98  NMGKPNIISHGEIVAINNCTELHGITVFTNYTLYTTGEPCAMCAGALVWADFKTVVWGTY 157

Query: 104 N 104
           N
Sbjct: 158 N 158


>gi|319645199|ref|ZP_07999432.1| RibD protein [Bacillus sp. BT1B_CT2]
 gi|317393008|gb|EFV73802.1| RibD protein [Bacillus sp. BT1B_CT2]
          Length = 362

 Score = 41.6 bits (96), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 40/120 (33%), Positives = 58/120 (48%), Gaps = 27/120 (22%)

Query: 7   FMSCALE-----EAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           +M+ ALE     E Q  A  N + VGAV V + +++    +    LK   AHAE+ AI+M
Sbjct: 6   YMNLALELARQGEGQTGA--NPL-VGAVVVKDGEVVGMGAH----LKYGEAHAEVHAIQM 58

Query: 62  GCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP----KGGGIE 111
             R     ++     YVTLEPC+       CA  I  + ++R+   A +P     G GIE
Sbjct: 59  AGRHAEGAVI-----YVTLEPCSHYGKTPPCAELIIRSGLKRVVVAAEDPNPLVSGRGIE 113


>gi|70954102|ref|XP_746114.1| hypothetical protein [Plasmodium chabaudi chabaudi]
 gi|56526631|emb|CAH78767.1| conserved hypothetical protein [Plasmodium chabaudi chabaudi]
          Length = 294

 Score = 41.2 bits (95), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 16/59 (27%), Positives = 34/59 (57%)

Query: 77  YVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQ 135
           Y+T EPC MCA A+  +R++ + +   N + G + +  + + L + +H  ++Y  + E+
Sbjct: 235 YLTHEPCFMCAMAMVHSRVKCVIFDKVNKQNGALFSKGKLHCLKSLNHHFKVYKTVREK 293


>gi|52080843|ref|YP_079634.1| riboflavin-specific deaminase [Bacillus licheniformis ATCC 14580]
 gi|52786214|ref|YP_092043.1| hypothetical protein BLi02475 [Bacillus licheniformis ATCC 14580]
 gi|52004054|gb|AAU23996.1| riboflavin-specific deaminase [Bacillus licheniformis ATCC 14580]
 gi|52348716|gb|AAU41350.1| RibD [Bacillus licheniformis ATCC 14580]
          Length = 362

 Score = 41.2 bits (95), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 40/120 (33%), Positives = 58/120 (48%), Gaps = 27/120 (22%)

Query: 7   FMSCALE-----EAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           +M+ ALE     E Q  A  N + VGAV V + +++    +    LK   AHAE+ AI+M
Sbjct: 6   YMNLALELARQGEGQTGA--NPL-VGAVVVKDGEVVGMGAH----LKYGEAHAEVHAIQM 58

Query: 62  GCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP----KGGGIE 111
             R     ++     YVTLEPC+       CA  I  + ++R+   A +P     G GIE
Sbjct: 59  AGRHAEGAVI-----YVTLEPCSHYGKTPPCAELIIRSGLKRVVVAAEDPNPLVSGRGIE 113


>gi|148358764|ref|YP_001249971.1| riboflavin biosynthesis protein RibD [Legionella pneumophila str.
          Corby]
 gi|296106809|ref|YP_003618509.1| riboflavin biosynthesis protein [Legionella pneumophila 2300/99
          Alcoy]
 gi|148280537|gb|ABQ54625.1| riboflavin biosynthesis protein RibD [Legionella pneumophila str.
          Corby]
 gi|295648710|gb|ADG24557.1| riboflavin biosynthesis protein [Legionella pneumophila 2300/99
          Alcoy]
          Length = 357

 Score = 41.2 bits (95), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 34/81 (41%), Positives = 42/81 (51%), Gaps = 15/81 (18%)

Query: 7  FMSCALEEAQ--NAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
          F+  ALE+A+           VGAVAV N  II++A +R       T HAE L       
Sbjct: 5  FLLAALEQAKLGRGFCAPNPSVGAVAVQNGNIIAQAWHRGAG----TPHAEQL------- 53

Query: 65 ILSQ--EILPEVDLYVTLEPC 83
          +LSQ     PEV LY+TLEPC
Sbjct: 54 LLSQIPPQTPEVTLYITLEPC 74


>gi|313674792|ref|YP_004052788.1| cmp/dcmp deaminase zinc-binding protein [Marivirga tractuosa DSM
           4126]
 gi|312941490|gb|ADR20680.1| CMP/dCMP deaminase zinc-binding protein [Marivirga tractuosa DSM
           4126]
          Length = 138

 Score = 41.2 bits (95), Expect = 0.044,   Method: Compositional matrix adjust.
 Identities = 31/87 (35%), Positives = 43/87 (49%), Gaps = 2/87 (2%)

Query: 15  AQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEV 74
           A + A   + P GAV V + +    +G     L    AHAEI AI    + L  +   E+
Sbjct: 10  AIDLAKERKTPFGAVLV-DPEGQHVSGYNTTILDGAVAHAEINAISK-IKQLDYDRAEEL 67

Query: 75  DLYVTLEPCTMCAAAISLARIRRLYYG 101
            L+ T+EPC MC +AI  A I  + YG
Sbjct: 68  TLFTTVEPCPMCMSAIIWAGIGEVIYG 94


>gi|296105681|ref|YP_003617381.1| cytidine/deoxycytidylate deaminase [Legionella pneumophila 2300/99
           Alcoy]
 gi|295647582|gb|ADG23429.1| cytidine/deoxycytidylate deaminase [Legionella pneumophila 2300/99
           Alcoy]
          Length = 160

 Score = 41.2 bits (95), Expect = 0.045,   Method: Compositional matrix adjust.
 Identities = 27/80 (33%), Positives = 40/80 (50%), Gaps = 3/80 (3%)

Query: 25  PVGAVAVLNNK-IISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83
           P GA+ V ++K I+ ++ N          H E+  I           + ++ LY T EPC
Sbjct: 31  PYGAIIVYDDKEILLKSVNSAHH--HPLMHGELSVIHTLFNNGFDGDVSKLSLYTTAEPC 88

Query: 84  TMCAAAISLARIRRLYYGAS 103
            MCAAAI  A I ++ YG+S
Sbjct: 89  PMCAAAIYWAMIPKVVYGSS 108


>gi|167946681|ref|ZP_02533755.1| hypothetical protein Epers_09088 [Endoriftia persephone
           'Hot96_1+Hot96_2']
          Length = 112

 Score = 41.2 bits (95), Expect = 0.045,   Method: Compositional matrix adjust.
 Identities = 25/68 (36%), Positives = 38/68 (55%), Gaps = 5/68 (7%)

Query: 85  MCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT---CHHSPEIYPGISEQRSRQII 141
           MCA AI  AR++R+ Y AS+P+ G    G+ F  L +    +H  E   G+   +S   +
Sbjct: 1   MCAGAIVHARVKRVVYAASDPRSGAA--GSVFDLLPSDQRFNHRVESEGGLLSGQSANRL 58

Query: 142 QDFFKERR 149
           +DFF+ RR
Sbjct: 59  RDFFRARR 66


>gi|282866591|ref|ZP_06275633.1| DEAD/DEAH box helicase domain protein [Streptomyces sp. ACTE]
 gi|282558493|gb|EFB64053.1| DEAD/DEAH box helicase domain protein [Streptomyces sp. ACTE]
          Length = 537

 Score = 41.2 bits (95), Expect = 0.045,   Method: Composition-based stats.
 Identities = 41/150 (27%), Positives = 67/150 (44%), Gaps = 20/150 (13%)

Query: 14  EAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPE 73
           E Q  AL+  + V  V     +++  AG R  +L    +H  +L +     +L    LP+
Sbjct: 141 EPQVEALKKGVDV--VVGTPGRLLDLAGQRKLDL----SHIRVLVLDEADEMLDLGFLPD 194

Query: 74  VDLYVTLEPC---------TMCAAAISLAR---IRRLYYGASNP--KGGGIENGTQFYTL 119
           V+  +T+ P          TM  A ISLAR    +  +  A++P  +G  ++N TQF   
Sbjct: 195 VERIITMLPAKRQTMLFSATMPGAVISLARRYMSQPTHINATSPDDEGTTVKNTTQFVYR 254

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
           A     PE+   I +  SR +   F + +R
Sbjct: 255 AHSMDKPEMVSRILQAESRGLAMIFCRTKR 284


>gi|225620931|ref|YP_002722189.1| riboflavin biosynthesis protein RibD [Brachyspira hyodysenteriae
           WA1]
 gi|225215751|gb|ACN84485.1| riboflavin biosynthesis protein RibD [Brachyspira hyodysenteriae
           WA1]
          Length = 360

 Score = 41.2 bits (95), Expect = 0.045,   Method: Compositional matrix adjust.
 Identities = 47/148 (31%), Positives = 69/148 (46%), Gaps = 22/148 (14%)

Query: 8   MSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M  A+EEA+      +  P VGAV V + K+I    ++    K    HAEI A       
Sbjct: 1   MKMAIEEAKKGEGFTSPNPLVGAVIVKDGKVIGIGYHK----KCGENHAEINAFLDAKE- 55

Query: 66  LSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYG--ASNPKGGGIENGTQFY 117
              E + + D+YVTLEPC+       CA AI   +++R+  G   SNPK  G  NG +  
Sbjct: 56  -KGENVEDADIYVTLEPCSHYGKTPPCADAIIKNKLKRVIIGCVDSNPKVAG--NGIKKL 112

Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDFF 145
             A      E+   + E+  R++ + FF
Sbjct: 113 KDAGI----EVIVNVLEEECRKLNEVFF 136


>gi|148358330|ref|YP_001249537.1| cytidine/deoxycytidylate deaminase [Legionella pneumophila str.
           Corby]
 gi|148280103|gb|ABQ54191.1| cytidine/deoxycytidylate deaminase [Legionella pneumophila str.
           Corby]
          Length = 153

 Score = 41.2 bits (95), Expect = 0.045,   Method: Compositional matrix adjust.
 Identities = 27/80 (33%), Positives = 40/80 (50%), Gaps = 3/80 (3%)

Query: 25  PVGAVAVLNNK-IISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83
           P GA+ V ++K I+ ++ N          H E+  I           + ++ LY T EPC
Sbjct: 24  PYGAIIVYDDKEILLKSVNSAHH--HPLMHGELSVIHTLFNNGFDGDVSKLSLYTTAEPC 81

Query: 84  TMCAAAISLARIRRLYYGAS 103
            MCAAAI  A I ++ YG+S
Sbjct: 82  PMCAAAIYWAMIPKVVYGSS 101


>gi|327398273|ref|YP_004339142.1| CMP/dCMP deaminase zinc-binding protein [Hippea maritima DSM 10411]
 gi|327180902|gb|AEA33083.1| CMP/dCMP deaminase zinc-binding protein [Hippea maritima DSM 10411]
          Length = 183

 Score = 41.2 bits (95), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 32/99 (32%), Positives = 48/99 (48%), Gaps = 4/99 (4%)

Query: 8   MSCALEEAQNAALRNEIPVGA-VAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  A+E A+ +      P GA +     K++S   N   + K    HAEI+A  M  + L
Sbjct: 29  MLFAIELAKLSIRNGGGPFGAAIFSKEGKLVSCGVNLVTKEKLSILHAEIVAFIMAQKKL 88

Query: 67  SQEILPE---VDLYVTLEPCTMCAAAISLARIRRLYYGA 102
               L E    +L+ + EPC MC  AI  + I+R+ +GA
Sbjct: 89  KTYSLSEAGYFELFSSSEPCAMCLGAILWSGIKRVVFGA 127


>gi|317509323|ref|ZP_07966943.1| cytidine and deoxycytidylate deaminase zinc-binding protein
           [Segniliparus rugosus ATCC BAA-974]
 gi|316252379|gb|EFV11829.1| cytidine and deoxycytidylate deaminase zinc-binding protein
           [Segniliparus rugosus ATCC BAA-974]
          Length = 148

 Score = 41.2 bits (95), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 30/104 (28%), Positives = 45/104 (43%), Gaps = 5/104 (4%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
            ++ A+ EA+       +P+GA     + K++ R  NR  +  D   HAE  A R   R 
Sbjct: 6   MLATAVAEARAGLAEGGVPIGAALFTRDGKLLGRGHNRRVQWDDPAIHAETDAFRAAGR- 64

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG-ASNPKGG 108
             Q    +  +  TL PC  C+  +    I  +  G ASN  GG
Sbjct: 65  --QRDYRDTVMVTTLSPCWYCSGLVRQFNIGAVIIGEASNFHGG 106


>gi|228922109|ref|ZP_04085419.1| Riboflavin biosynthesis protein [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
 gi|228837525|gb|EEM82856.1| Riboflavin biosynthesis protein [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
          Length = 360

 Score = 41.2 bits (95), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 44/149 (29%), Positives = 70/149 (46%), Gaps = 25/149 (16%)

Query: 8   MSCALEEAQNAALRNEIP----VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
           M  ALE A+  A++ +      VG+V V +N+I+    +    +K    HAEI AIRM  
Sbjct: 1   MKLALENAK--AMKGQTTPNPLVGSVIVNDNRIVGVGAH----MKAGEPHAEIHAIRM-- 52

Query: 64  RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFY 117
              ++E      +YVTLEPC+       CA AI  A I+++     +P       G +  
Sbjct: 53  ---AEEQARGGTIYVTLEPCSHHGRTGPCAEAIVQAGIKKVVVATLDPNPLVSGRGIKIL 109

Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDFFK 146
             A      E+  G+ E+ S+++ + F K
Sbjct: 110 QDAGI----EVLVGVCEEESKKMNEVFNK 134


>gi|15893879|ref|NP_347228.1| riboflavin biosynthesis protein RIBD (pirimidine deaminase and
           pirimidine reductase) [Clostridium acetobutylicum ATCC
           824]
 gi|15023459|gb|AAK78568.1|AE007574_6 Riboflavin biosynthesis protein RIBD (pirimidine deaminase and
           pirimidine reductase) [Clostridium acetobutylicum ATCC
           824]
          Length = 383

 Score = 41.2 bits (95), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 43/148 (29%), Positives = 66/148 (44%), Gaps = 21/148 (14%)

Query: 7   FMSCALEEAQNAA-LRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           FM  ALE A+  +   N  P VGAV V +NKI+    +     K    HAE+ A+ M  +
Sbjct: 23  FMKRALEIAEKGSGYVNPNPMVGAVIVKDNKIVGEGYHE----KFGGNHAEVNALNMAGK 78

Query: 65  ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
                     +LYVTLEPC+       CA A+  A I+R+     +P       G +   
Sbjct: 79  DAEGS-----ELYVTLEPCSHYGKTPPCALAVVKAGIKRVIIAMEDPNPLVSTKGIKILK 133

Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFK 146
                +  E+  G+ ++ S ++ + F K
Sbjct: 134 ----ENGIEVITGVMKKESEKLNEVFIK 157


>gi|66823805|ref|XP_645257.1| hypothetical protein DDB_G0272442 [Dictyostelium discoideum AX4]
 gi|60473427|gb|EAL71373.1| hypothetical protein DDB_G0272442 [Dictyostelium discoideum AX4]
          Length = 241

 Score = 41.2 bits (95), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 26/92 (28%), Positives = 43/92 (46%), Gaps = 9/92 (9%)

Query: 15  AQNAALRNEIPVGAVAVLNNKII----SRAGNRNRELKDVTAHAEILAIRMGCRILSQEI 70
           A + A+ +    GA  V  N  +    +  G  +R L     H EI AI    ++  QE 
Sbjct: 72  ALDKAIEHNSKFGAAIVHKNGTLMCTAANTGEGSRIL-----HGEIRAILNCTQLYQQET 126

Query: 71  LPEVDLYVTLEPCTMCAAAISLARIRRLYYGA 102
             +  +Y T EPC MC+AA+   +  ++ +G+
Sbjct: 127 WEDYYMYTTGEPCPMCSAALLWTKFEKVIFGS 158


>gi|290994440|ref|XP_002679840.1| predicted protein [Naegleria gruberi]
 gi|284093458|gb|EFC47096.1| predicted protein [Naegleria gruberi]
          Length = 357

 Score = 41.2 bits (95), Expect = 0.047,   Method: Compositional matrix adjust.
 Identities = 22/61 (36%), Positives = 35/61 (57%), Gaps = 5/61 (8%)

Query: 74  VDLYVTLEPCTMCAAAISLARIRRLYY--GASNPKGGGIENGTQFYTL---ATCHHSPEI 128
           +DL+++ EPC MCA A+  +RIRR+Y+     N  GG I    Q Y +   +  +H  ++
Sbjct: 292 LDLFISHEPCCMCAMALLHSRIRRIYFVHECGNNFGGLINKVNQEYCVHENSKLNHHFDV 351

Query: 129 Y 129
           Y
Sbjct: 352 Y 352


>gi|315443623|ref|YP_004076502.1| cytosine/adenosine deaminase [Mycobacterium sp. Spyr1]
 gi|315261926|gb|ADT98667.1| cytosine/adenosine deaminase [Mycobacterium sp. Spyr1]
          Length = 146

 Score = 41.2 bits (95), Expect = 0.047,   Method: Compositional matrix adjust.
 Identities = 29/104 (27%), Positives = 43/104 (41%), Gaps = 4/104 (3%)

Query: 7   FMSCALEEAQNAALRNEIPVG-AVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
            +  A+EEA+       IP+G A+   +  ++    NR  +L D + HAE  A R   R 
Sbjct: 6   MLDVAVEEARKGLAEGGIPIGAALFAADGTLLGSGHNRRVQLDDPSLHAETDAFRNAGR- 64

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109
             Q       +  TL PC  C+  +    I  +  G S    GG
Sbjct: 65  --QRGYRSTTMVTTLSPCWYCSGLVRQFNIGAVVIGESRTFTGG 106


>gi|224536352|ref|ZP_03676891.1| hypothetical protein BACCELL_01226 [Bacteroides cellulosilyticus
           DSM 14838]
 gi|224522049|gb|EEF91154.1| hypothetical protein BACCELL_01226 [Bacteroides cellulosilyticus
           DSM 14838]
          Length = 348

 Score = 41.2 bits (95), Expect = 0.047,   Method: Compositional matrix adjust.
 Identities = 45/148 (30%), Positives = 64/148 (43%), Gaps = 21/148 (14%)

Query: 7   FMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
           +M   ++ AQN  L N  P   VGAV V + KII         ++   AHAE+ AIR   
Sbjct: 9   YMRRCIQLAQNG-LCNAAPNPMVGAVIVCDGKIIGEG----YHVRCGKAHAEVNAIR--- 60

Query: 64  RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFY 117
            +    +L    +YV+LEPC+       CA  I   +I R+  G  +P       G Q  
Sbjct: 61  SVKETSLLKRSTIYVSLEPCSHHGKTPPCADLIIEKQIPRIVIGCQDPFSKVAGRGIQKL 120

Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDFF 145
             A      E+  G+ E   R +I+ F 
Sbjct: 121 KDA----GREVIVGVLEDECRHLIKRFI 144


>gi|325508006|gb|ADZ19642.1| Riboflavin biosynthesis protein RIBD (pirimidine deaminase and
           pirimidine reductase) [Clostridium acetobutylicum EA
           2018]
          Length = 365

 Score = 41.2 bits (95), Expect = 0.047,   Method: Compositional matrix adjust.
 Identities = 43/148 (29%), Positives = 66/148 (44%), Gaps = 21/148 (14%)

Query: 7   FMSCALEEAQNAA-LRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           FM  ALE A+  +   N  P VGAV V +NKI+    +     K    HAE+ A+ M  +
Sbjct: 5   FMKRALEIAEKGSGYVNPNPMVGAVIVKDNKIVGEGYHE----KFGGNHAEVNALNMAGK 60

Query: 65  ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
                     +LYVTLEPC+       CA A+  A I+R+     +P       G +   
Sbjct: 61  DAEGS-----ELYVTLEPCSHYGKTPPCALAVVKAGIKRVIIAMEDPNPLVSTKGIKILK 115

Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFK 146
                +  E+  G+ ++ S ++ + F K
Sbjct: 116 ----ENGIEVITGVMKKESEKLNEVFIK 139


>gi|160888034|ref|ZP_02069037.1| hypothetical protein BACUNI_00442 [Bacteroides uniformis ATCC 8492]
 gi|317478584|ref|ZP_07937741.1| riboflavin biosynthesis protein RibD [Bacteroides sp. 4_1_36]
 gi|156862533|gb|EDO55964.1| hypothetical protein BACUNI_00442 [Bacteroides uniformis ATCC 8492]
 gi|316905225|gb|EFV27022.1| riboflavin biosynthesis protein RibD [Bacteroides sp. 4_1_36]
          Length = 351

 Score = 41.2 bits (95), Expect = 0.047,   Method: Compositional matrix adjust.
 Identities = 46/148 (31%), Positives = 66/148 (44%), Gaps = 21/148 (14%)

Query: 7   FMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
           +M   ++ AQN  L N  P   VGAV V + KII    +    ++   AHAE+ AIR   
Sbjct: 8   YMLRCIQLAQNG-LCNTAPNPMVGAVIVCDGKIIGEGYH----VRCGEAHAEVNAIR--- 59

Query: 64  RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFY 117
            +    +L    +YV+LEPC+       CA  I   +I R+  G  +P       G Q  
Sbjct: 60  SVKDTSLLKRSTIYVSLEPCSHYGKTPPCADLIIEKQIPRIVIGCRDPFSKVAGRGIQKL 119

Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDFF 145
             A      E+  G+ E   RQ+I+ F 
Sbjct: 120 KDA----GREVIVGVLETECRQLIRRFI 143


>gi|290962921|ref|YP_003494103.1| guanine deaminase [Streptomyces scabiei 87.22]
 gi|260652447|emb|CBG75580.1| putative guanine deaminase [Streptomyces scabiei 87.22]
          Length = 226

 Score = 41.2 bits (95), Expect = 0.048,   Method: Compositional matrix adjust.
 Identities = 30/98 (30%), Positives = 41/98 (41%), Gaps = 5/98 (5%)

Query: 7   FMSCALEEAQNAALRN-EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           FM  A+E+A+    RN   P GAV V            N        H E +A+    R 
Sbjct: 68  FMRLAVEQAR----RNPAWPFGAVIVATRTGRVPGSGVNSGADSPLLHGEAVAMNDYVRR 123

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
                     LY T EPC+MC +A+  A +RR+ +  S
Sbjct: 124 HGNRGWAATTLYTTGEPCSMCMSALVWANVRRVVWAGS 161


>gi|168059034|ref|XP_001781510.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162667051|gb|EDQ53690.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 155

 Score = 41.2 bits (95), Expect = 0.048,   Method: Compositional matrix adjust.
 Identities = 32/120 (26%), Positives = 50/120 (41%), Gaps = 8/120 (6%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
            +  A+ EA+     + IP+GA       +++ R  NR  +  D + HAE  A R   R 
Sbjct: 1   MLDVAIAEARTGLGEDGIPIGAALFDAGGQLLGRGRNRRVQENDPSVHAETDAFRKAGR- 59

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI----ENGTQFYTLAT 121
             Q    +  +  TL PC  C+  +    I  +  G +    GG+    ENG Q   L +
Sbjct: 60  --QRSYRDTIMVTTLAPCWYCSGLVRQFNIGTVVVGETVNFQGGVAWLRENGVQVVDLQS 117


>gi|307107383|gb|EFN55626.1| hypothetical protein CHLNCDRAFT_133790 [Chlorella variabilis]
          Length = 449

 Score = 41.2 bits (95), Expect = 0.049,   Method: Composition-based stats.
 Identities = 17/55 (30%), Positives = 32/55 (58%)

Query: 75  DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIY 129
           D YV  EPCTMCA A+  +R+RR+ +  ++ + G +    + +   + +H  ++Y
Sbjct: 386 DCYVLREPCTMCAMALVHSRLRRVVFCCADRRYGALGGAFRLHAQRSLNHHYQVY 440


>gi|332291081|ref|YP_004429690.1| riboflavin biosynthesis protein RibD [Krokinobacter diaphorus
           4H-3-7-5]
 gi|332169167|gb|AEE18422.1| riboflavin biosynthesis protein RibD [Krokinobacter diaphorus
           4H-3-7-5]
          Length = 333

 Score = 41.2 bits (95), Expect = 0.050,   Method: Compositional matrix adjust.
 Identities = 44/158 (27%), Positives = 72/158 (45%), Gaps = 27/158 (17%)

Query: 1   MKKGNVFMSCALEEAQNA---ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57
           MK  N +++  +  A+N    A+ N   VGAV V NNKII+     +        HAE+ 
Sbjct: 1   MKIHNTYINRCIALAKNGLPVAMPNP-SVGAVLVHNNKIIAEGYTSDYG----GPHAEVN 55

Query: 58  AIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP----KG 107
            I    +  + E++ +  LYV+LEPC+       CA  +  + I+++  G  +P     G
Sbjct: 56  CIAF-AKANTPELIAKSTLYVSLEPCSHWGKTPPCADLVVASGIKKVVIGTIDPFAKVAG 114

Query: 108 GGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
            GI+   Q     T         G+ E+  ++I + FF
Sbjct: 115 AGIKRLIQAGVDVTV--------GVQEKECQEINKRFF 144


>gi|229110810|ref|ZP_04240373.1| Riboflavin biosynthesis protein [Bacillus cereus Rock1-15]
 gi|228672689|gb|EEL27970.1| Riboflavin biosynthesis protein [Bacillus cereus Rock1-15]
          Length = 348

 Score = 41.2 bits (95), Expect = 0.051,   Method: Compositional matrix adjust.
 Identities = 38/127 (29%), Positives = 60/127 (47%), Gaps = 19/127 (14%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85
           VG+V V +N+I+    +    +K    HAEI AIRM     + E +    +YVTLEPC+ 
Sbjct: 11  VGSVIVNDNRIVGVGAH----MKAGEPHAEIHAIRM-----AGEQVRGATIYVTLEPCSH 61

Query: 86  ------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139
                 CA AI  A I+++     +P       G +    A      E+  G+ E+ S++
Sbjct: 62  HGRTGPCAEAIVQAGIKKVVVATLDPNPLVSGRGIKILQDAGI----EVLVGVCEEESKK 117

Query: 140 IIQDFFK 146
           + + F K
Sbjct: 118 VNEVFNK 124


>gi|228986473|ref|ZP_04146609.1| Riboflavin biosynthesis protein [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
 gi|228773294|gb|EEM21724.1| Riboflavin biosynthesis protein [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
          Length = 358

 Score = 41.2 bits (95), Expect = 0.051,   Method: Compositional matrix adjust.
 Identities = 45/149 (30%), Positives = 69/149 (46%), Gaps = 25/149 (16%)

Query: 8   MSCALEEAQNAALRNEIP----VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
           M  ALE A+  A++ +      VG+V V +N+I+    +    +K    HAEI AIRM  
Sbjct: 1   MKLALENAK--AMKGQTTPNPLVGSVIVNDNRIVGIGAH----MKAGEPHAEIHAIRM-- 52

Query: 64  RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFY 117
              + E      +YVTLEPC+       CA AI  A I+R+     +P       G Q  
Sbjct: 53  ---AGEQARGGTIYVTLEPCSHHGRTGPCAEAIVQAGIKRVVVATLDPNPLVSGRGIQIL 109

Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDFFK 146
             A      ++  G+ E+ S+++ + F K
Sbjct: 110 QDAGI----DVLVGVCEEESKKMNEVFNK 134


>gi|206890490|ref|YP_002249110.1| riboflavin biosynthesis protein RibD [Thermodesulfovibrio
           yellowstonii DSM 11347]
 gi|206742428|gb|ACI21485.1| riboflavin biosynthesis protein RibD [Thermodesulfovibrio
           yellowstonii DSM 11347]
          Length = 370

 Score = 41.2 bits (95), Expect = 0.051,   Method: Compositional matrix adjust.
 Identities = 41/132 (31%), Positives = 58/132 (43%), Gaps = 28/132 (21%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC-- 83
           VGAV V N KIIS   ++   L     HAE  AIR      + E L    LYVTLEPC  
Sbjct: 32  VGAVIVKNGKIISEGYHKKAGL----PHAEAEAIRN-----ANESLKGATLYVTLEPCCH 82

Query: 84  -----TMCAAAISLARIRRLYYGASNP----KGGGIENGTQFYTLATCHHSPEIYPGISE 134
                  C  AI  + I R+  G  +P     G G+E           +H  ++  G+ E
Sbjct: 83  KDKKTPPCTDAIINSGINRVVIGMRDPNPKVSGKGVE--------ILNNHGIKVIEGVLE 134

Query: 135 QRSRQIIQDFFK 146
           +  +++ + + K
Sbjct: 135 EEVKKLNEFYIK 146


>gi|323145928|gb|ADX32169.1| hypothetical protein [Pseudomonas phage P3_CHA]
 gi|323146114|gb|ADX32354.1| hypothetical protein [Pseudomonas phage PAK_P3]
          Length = 138

 Score = 41.2 bits (95), Expect = 0.052,   Method: Compositional matrix adjust.
 Identities = 38/112 (33%), Positives = 49/112 (43%), Gaps = 17/112 (15%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGN----------RNRE--LKD 49
           K    FM CA E     ++     VGAV V  NKIIS+  N           N E   + 
Sbjct: 4   KHKEAFMRCA-ESFAECSVGVRAKVGAVIVQGNKIISQGYNGLPSGLEGPLENEEGVTRP 62

Query: 50  VTAHAEILAI-RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
              HAE  A+  + C   SQE      ++ T+ PC  CA  I  A I+R+YY
Sbjct: 63  EVRHAEKNALLWLSC---SQESAQGAWMFATMSPCEYCAHDIVDAGIKRVYY 111


>gi|325962810|ref|YP_004240716.1| cytosine/adenosine deaminase [Arthrobacter phenanthrenivorans
           Sphe3]
 gi|323468897|gb|ADX72582.1| cytosine/adenosine deaminase [Arthrobacter phenanthrenivorans
           Sphe3]
          Length = 161

 Score = 41.2 bits (95), Expect = 0.055,   Method: Compositional matrix adjust.
 Identities = 34/93 (36%), Positives = 46/93 (49%), Gaps = 4/93 (4%)

Query: 12  LEEAQNAALRNEI----PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           LE+A   A RN      P GA+ V  +  +    NR     D TAHAE++AIR      +
Sbjct: 14  LEQAVELATRNVSEGGGPFGALVVTPDGRVHEGVNRVTRDNDPTAHAEVVAIRAAAAATA 73

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
              L    LY + EPC +C A+   ARI R+Y+
Sbjct: 74  NYDLHGAVLYASCEPCPLCLASALWARIDRVYF 106


>gi|196231665|ref|ZP_03130522.1| riboflavin biosynthesis protein RibD [Chthoniobacter flavus
           Ellin428]
 gi|196224137|gb|EDY18650.1| riboflavin biosynthesis protein RibD [Chthoniobacter flavus
           Ellin428]
          Length = 344

 Score = 40.8 bits (94), Expect = 0.055,   Method: Compositional matrix adjust.
 Identities = 41/109 (37%), Positives = 50/109 (45%), Gaps = 19/109 (17%)

Query: 7   FMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
           FM  AL EA+   L    P   VGAV V   KII+R  +    L     HAEI A+R   
Sbjct: 6   FMRAALAEARRG-LGQTSPNPAVGAVIVRAGKIIARGYHHRAGLP----HAEIEALRA-- 58

Query: 64  RILSQEILPE-VDLYVTLEPCTM------CAAAISLARIRRLYYGASNP 105
             L +  L     +YVTLEPC+       C  AI  A  RR+  G  +P
Sbjct: 59  --LPKPALARGATIYVTLEPCSTHGRTPPCVEAIIAAGFRRVVIGTIDP 105


>gi|161830583|ref|YP_001596568.1| riboflavin biosynthesis protein RibD [Coxiella burnetii RSA 331]
 gi|161762450|gb|ABX78092.1| riboflavin biosynthesis protein RibD [Coxiella burnetii RSA 331]
          Length = 354

 Score = 40.8 bits (94), Expect = 0.055,   Method: Compositional matrix adjust.
 Identities = 35/97 (36%), Positives = 47/97 (48%), Gaps = 21/97 (21%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR-MGCRILSQEILPEVDLYVTLEPCT 84
           VGAV V ++KIIS   ++   L     HAE+ AI+ +G +           LYVTLEPC 
Sbjct: 29  VGAVVVKDDKIISTGFHKRSGL----PHAEVEAIKSLGDKARGAA------LYVTLEPCC 78

Query: 85  M------CAAAISLARIRRLYYGASNPK----GGGIE 111
                  C   I  + I+ +YYG  +P     G GIE
Sbjct: 79  HFGKTPPCTDLIIQSGIKDVYYGLHDPNLAVCGKGIE 115


>gi|52142146|ref|YP_084683.1| riboflavin biosynthesis protein;
           diaminohydroxyphosphoribosylaminopyrimidine deaminase
           [Bacillus cereus E33L]
 gi|51975615|gb|AAU17165.1| riboflavin biosynthesis protein;
           diaminohydroxyphosphoribosylaminopyrimidine deaminase
           [Bacillus cereus E33L]
          Length = 367

 Score = 40.8 bits (94), Expect = 0.055,   Method: Compositional matrix adjust.
 Identities = 45/156 (28%), Positives = 73/156 (46%), Gaps = 25/156 (16%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP----VGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56
           M +  ++M  ALE A+  A++ +      VG+V V +N+I+    +    +K    HAEI
Sbjct: 1   MLEHELYMKLALENAK--AMKGQTTPNPLVGSVIVNDNRIVGIGAH----MKAGEPHAEI 54

Query: 57  LAIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGI 110
            AIRM     + E      +YVTLEPC+       CA AI  A I+++     +P     
Sbjct: 55  HAIRM-----AGEQACGGTIYVTLEPCSHHGRTGPCAEAIVQAGIKKVVVATLDPNPLVS 109

Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
             G +    A      E+  G+ E+ S+++ + F K
Sbjct: 110 GRGIKILQDAGI----EVLVGVCEEESKKMNEVFNK 141


>gi|330685448|gb|EGG97103.1| riboflavin biosynthesis protein RibD [Staphylococcus epidermidis
           VCU121]
          Length = 347

 Score = 40.8 bits (94), Expect = 0.056,   Method: Compositional matrix adjust.
 Identities = 42/161 (26%), Positives = 66/161 (40%), Gaps = 44/161 (27%)

Query: 7   FMSCALEEAQNAALRNEI--PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           FM+ A++ AQ    +  +  PVG+V V + +I+    +    L+    HAE+ A+ M   
Sbjct: 4   FMNYAIQLAQMVDGQTGVNPPVGSVVVKDGRIVGIGAH----LRKGDKHAEVQALDM--- 56

Query: 65  ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP----------KGG 108
             +Q       +YV+LEPCT       C   I  A I+++ Y   +           K  
Sbjct: 57  --AQSEAKGATIYVSLEPCTHHGSTPPCVDKIIEAGIQKVIYAVKDTTLISKGDDILKNA 114

Query: 109 GIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
           GIE   Q+  +A                  Q+ QDFF  +R
Sbjct: 115 GIEVEFQYNAVAA-----------------QLYQDFFTAKR 138


>gi|284043456|ref|YP_003393796.1| CMP/dCMP deaminase zinc-binding protein [Conexibacter woesei DSM
           14684]
 gi|283947677|gb|ADB50421.1| CMP/dCMP deaminase zinc-binding protein [Conexibacter woesei DSM
           14684]
          Length = 158

 Score = 40.8 bits (94), Expect = 0.056,   Method: Compositional matrix adjust.
 Identities = 33/101 (32%), Positives = 51/101 (50%), Gaps = 5/101 (4%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNREL--KDVTAHAEI-LAIRMGC 63
           ++  A+  +Q A    + P GA+ V    ++  A  RN  +  +DV+AH E+ LA+  G 
Sbjct: 11  WLRMAIALSQQARAAGDEPFGALLVGAGGVL-LAQERNSVVTDRDVSAHPELKLAVWAG- 68

Query: 64  RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASN 104
           R L  E+     +Y + E C MCAAA+  A +  L Y  S 
Sbjct: 69  RNLDPEVARLTTMYTSCENCAMCAAAMVWANLGTLVYSLSG 109


>gi|294655936|ref|XP_458164.2| DEHA2C11066p [Debaryomyces hansenii CBS767]
 gi|199430728|emb|CAG86235.2| DEHA2C11066p [Debaryomyces hansenii]
          Length = 384

 Score = 40.8 bits (94), Expect = 0.056,   Method: Compositional matrix adjust.
 Identities = 23/78 (29%), Positives = 37/78 (47%), Gaps = 4/78 (5%)

Query: 58  AIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFY 117
           A R     L  ++L    +Y T EPC MC+ A+  +RI R+ Y    P+ GG+ +  Q  
Sbjct: 288 ADRTDLNYLCHDLL----VYTTHEPCIMCSMALVHSRIGRIIYMKGVPETGGLSSNYQLG 343

Query: 118 TLATCHHSPEIYPGISEQ 135
                +   +I+  I E+
Sbjct: 344 DRDGLNWKYDIWKWIGEE 361


>gi|83589766|ref|YP_429775.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase /
           diaminohydroxyphosphoribosylaminopyrimidine deaminase
           [Moorella thermoacetica ATCC 39073]
 gi|83572680|gb|ABC19232.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Moorella
           thermoacetica ATCC 39073]
          Length = 376

 Score = 40.8 bits (94), Expect = 0.056,   Method: Compositional matrix adjust.
 Identities = 45/153 (29%), Positives = 66/153 (43%), Gaps = 29/153 (18%)

Query: 6   VFMSCALEEAQNAALRNEI--PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
           +FM+ ALE A+    R      VGAV V + +++    ++    K  T HAEI A+R   
Sbjct: 7   IFMARALELARQGLGRTSPNPTVGAVIVRDGQVVGEGYHQ----KAGTPHAEIHALRA-- 60

Query: 64  RILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPK----GGGIENG 113
              + E      LYVTLEPC        C  AI  A I+R+    ++P     GGG    
Sbjct: 61  ---AGEKARGATLYVTLEPCCHYGRTPPCTEAIIAAGIKRVVAAMADPNPRVAGGGFR-- 115

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
                 A      E+  G+    +R++ + F K
Sbjct: 116 ------ALSQAGIEVETGLLADEARRLNEAFIK 142


>gi|68073195|ref|XP_678512.1| Cytidine and deoxycytidylate deaminase zinc-binding region
           [Plasmodium berghei strain ANKA]
 gi|56499004|emb|CAI00047.1| Cytidine and deoxycytidylate deaminase zinc-binding region,
           putative [Plasmodium berghei]
          Length = 317

 Score = 40.8 bits (94), Expect = 0.056,   Method: Compositional matrix adjust.
 Identities = 16/59 (27%), Positives = 33/59 (55%)

Query: 77  YVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQ 135
           Y+T EPC MCA A+  +R++ + +   N + G + +  + + L   +H  ++Y  + E+
Sbjct: 258 YLTHEPCFMCAMAMVHSRVKCVIFDKVNKQNGALFSREKLHCLKNLNHHFKVYKTVREK 316


>gi|163792387|ref|ZP_02186364.1| hypothetical protein BAL199_16108 [alpha proteobacterium BAL199]
 gi|159182092|gb|EDP66601.1| hypothetical protein BAL199_16108 [alpha proteobacterium BAL199]
          Length = 163

 Score = 40.8 bits (94), Expect = 0.057,   Method: Compositional matrix adjust.
 Identities = 30/95 (31%), Positives = 43/95 (45%), Gaps = 2/95 (2%)

Query: 11  ALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELK-DVTAHAEILAIRMGCRILSQE 69
           ALE A+ A    + P G+V V ++  +  A +RNR    D T H E    R     +   
Sbjct: 13  ALELAREALEAGDAPFGSVLVASDGTVL-AEDRNRTGGGDRTRHPEFALARWAAENMKPA 71

Query: 70  ILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASN 104
             P   +Y + E C MCAAA     + R+ Y  S+
Sbjct: 72  DRPGATVYTSGEHCPMCAAAHGFVGLGRIVYAGSS 106


>gi|298248927|ref|ZP_06972731.1| riboflavin biosynthesis protein RibD [Ktedonobacter racemifer DSM
           44963]
 gi|297546931|gb|EFH80798.1| riboflavin biosynthesis protein RibD [Ktedonobacter racemifer DSM
           44963]
          Length = 383

 Score = 40.8 bits (94), Expect = 0.058,   Method: Compositional matrix adjust.
 Identities = 43/134 (32%), Positives = 56/134 (41%), Gaps = 36/134 (26%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI-RMGCRILSQEILPEVDLYVTLEPCT 84
           VGAV V +N++I R             HAEI A+   G    S       DLY TLEPC 
Sbjct: 27  VGAVIVRDNRVIGRGATS----PPYGPHAEIHALNEAGATAASG-----ADLYTTLEPCC 77

Query: 85  M------CAAAISLARIRRLYYGASNP----KGGGI----ENGTQFYTLATCHHSPEIYP 130
           +      C  AI  A IRR+  GA +P     G G+    E G    T            
Sbjct: 78  IAIHTPPCTKAIIAAGIRRVIIGALDPNPRVSGRGVAQLREAGINVVT------------ 125

Query: 131 GISEQRSRQIIQDF 144
           GI++Q +  +I+ F
Sbjct: 126 GIAQQETSALIRPF 139


>gi|270295600|ref|ZP_06201801.1| riboflavin biosynthesis protein RibD [Bacteroides sp. D20]
 gi|270274847|gb|EFA20708.1| riboflavin biosynthesis protein RibD [Bacteroides sp. D20]
          Length = 351

 Score = 40.8 bits (94), Expect = 0.058,   Method: Compositional matrix adjust.
 Identities = 46/148 (31%), Positives = 66/148 (44%), Gaps = 21/148 (14%)

Query: 7   FMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
           +M   ++ AQN  L N  P   VGAV V + KII    +    ++   AHAE+ AIR   
Sbjct: 8   YMLRCIQLAQNG-LCNTAPNPMVGAVIVCDGKIIGEGYH----VRCGEAHAEVNAIR--- 59

Query: 64  RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFY 117
            +    +L    +YV+LEPC+       CA  I   +I R+  G  +P       G Q  
Sbjct: 60  SVKDTSLLKRSTIYVSLEPCSHYGKTPPCADLIIEKQIPRIVIGCRDPFSKVAGRGIQKL 119

Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDFF 145
             A      E+  G+ E   RQ+I+ F 
Sbjct: 120 KDA----GREVIVGVLETECRQLIRRFI 143


>gi|268611449|ref|ZP_06145176.1| putative Cytidine/deoxycytidylate deaminase, zinc-binding region
           (CMP/dCMP deaminase, zinc-binding) protein [Ruminococcus
           flavefaciens FD-1]
          Length = 210

 Score = 40.8 bits (94), Expect = 0.058,   Method: Compositional matrix adjust.
 Identities = 32/107 (29%), Positives = 51/107 (47%), Gaps = 23/107 (21%)

Query: 14  EAQNAALRNEIPVGAVAVLNNKIISRAGN---------RNRELKDVTAHAEILAIRMGCR 64
           EA +A     +P GAV      I  R GN         +N ++   T+H+ I AI     
Sbjct: 15  EAWDAMKSGSVPSGAV------IYDREGNLLAESHNGFKNTDVNPYTSHSCINAINQ-LS 67

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARI-------RRLYYGASN 104
           + + E    + +Y ++EPC MC  AI+++ I       R L+YGA++
Sbjct: 68  LRNVESNSGLTIYSSMEPCFMCLGAIAISNIKEIHSASRDLFYGAAH 114


>gi|2493562|sp|P70814|RIBD_BACAM RecName: Full=Riboflavin biosynthesis protein RibD; Includes:
           RecName:
           Full=Diaminohydroxyphosphoribosylaminopyrimidine
           deaminase; Short=DRAP deaminase; AltName:
           Full=Riboflavin-specific deaminase; Includes: RecName:
           Full=5-amino-6-(5-phosphoribosylamino)uracil reductase;
           AltName: Full=HTP reductase
 gi|1592688|emb|CAA65189.1| deaminase [Bacillus amyloliquefaciens]
          Length = 371

 Score = 40.8 bits (94), Expect = 0.058,   Method: Compositional matrix adjust.
 Identities = 34/108 (31%), Positives = 52/108 (48%), Gaps = 19/108 (17%)

Query: 7   FMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
           +M+ A+E A+    + + P   VGAV V   +I+    +    L+   AHAE+ AI M  
Sbjct: 5   YMNTAIELARRGEGQTQ-PNPLVGAVVVKKRQIVGMGAH----LQYGEAHAEVHAINMAG 59

Query: 64  RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP 105
            +         DLYVTLEPC+       CA  I  + I+R++    +P
Sbjct: 60  SLAKG-----ADLYVTLEPCSHYGKTPPCAELIMKSGIKRVFIAVEDP 102


>gi|170721237|ref|YP_001748925.1| CMP/dCMP deaminase zinc-binding [Pseudomonas putida W619]
 gi|169759240|gb|ACA72556.1| CMP/dCMP deaminase zinc-binding [Pseudomonas putida W619]
          Length = 169

 Score = 40.8 bits (94), Expect = 0.059,   Method: Compositional matrix adjust.
 Identities = 32/91 (35%), Positives = 46/91 (50%), Gaps = 2/91 (2%)

Query: 15  AQNAALRNEIPVGA-VAVLNNKIISRAGNRNRELK-DVTAHAEILAIRMGCRILSQEILP 72
           A+ +  R   P  A VA    ++I+ AGN +   + D T HAE++A  +  + L  E L 
Sbjct: 27  AEQSKARGRHPFAAIVADAEGRVIASAGNNSMPPEGDPTQHAELVAAALAAKALPPEALA 86

Query: 73  EVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
              LY + EPC MCA A+    I R+ Y  S
Sbjct: 87  NCTLYTSAEPCCMCAGAVYWTGIGRVVYALS 117


>gi|226950300|ref|YP_002805391.1| riboflavin biosynthesis protein RibD [Clostridium botulinum A2 str.
           Kyoto]
 gi|226842626|gb|ACO85292.1| riboflavin biosynthesis protein RibD [Clostridium botulinum A2 str.
           Kyoto]
          Length = 365

 Score = 40.8 bits (94), Expect = 0.060,   Method: Compositional matrix adjust.
 Identities = 45/158 (28%), Positives = 71/158 (44%), Gaps = 29/158 (18%)

Query: 1   MKKGNVFMSCALEEAQNAALR-NEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           M+  N +M  AL+ A+    + N  P VGA+ V NNKII    ++        +HAE+ A
Sbjct: 1   MEDYNFYMEKALKLAERGEGKVNPNPKVGAIVVKNNKIIGEGYHKYFG----GSHAEVYA 56

Query: 59  IRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP----KGG 108
           +R      + E      +YVTLEPC+       CA +I    I +      +P    +G 
Sbjct: 57  LRE-----AGEKAKGATIYVTLEPCSHYGKTPPCAESIVKMGISKAIIAMKDPNPLVEGR 111

Query: 109 GIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
           GI+            +  E+  GI E+ S+++ + F K
Sbjct: 112 GID--------ILKQNGIEVVTGIMEKESKKLNEVFIK 141


>gi|296332262|ref|ZP_06874724.1| fused diaminohydroxyphosphoribosylaminopyrimidine deaminase;
           5-amino-6-(5-phosphoribosylamino) uracil reductase
           [Bacillus subtilis subsp. spizizenii ATCC 6633]
 gi|305674964|ref|YP_003866636.1| fused diaminohydroxyphosphoribosylaminopyrimidine deaminase;
           5-amino-6-(5-phosphoribosylamino) uracil reductase
           [Bacillus subtilis subsp. spizizenii str. W23]
 gi|296150576|gb|EFG91463.1| fused diaminohydroxyphosphoribosylaminopyrimidine deaminase;
           5-amino-6-(5-phosphoribosylamino) uracil reductase
           [Bacillus subtilis subsp. spizizenii ATCC 6633]
 gi|305413208|gb|ADM38327.1| fused diaminohydroxyphosphoribosylaminopyrimidine deaminase;
           5-amino-6-(5-phosphoribosylamino) uracil reductase
           [Bacillus subtilis subsp. spizizenii str. W23]
          Length = 361

 Score = 40.8 bits (94), Expect = 0.060,   Method: Compositional matrix adjust.
 Identities = 34/107 (31%), Positives = 50/107 (46%), Gaps = 17/107 (15%)

Query: 7   FMSCALEEAQNAALRNEIP--VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           +M  AL+ A+    + E    VGAV V + +I+    +    LK   AHAE+ AI M   
Sbjct: 5   YMKLALDLAKQGEGQTESNPLVGAVVVKDGQIVGMGAH----LKYGEAHAEVHAIHMAGS 60

Query: 65  ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP 105
                     D+YVTLEPC+       CA  I  + I+R++    +P
Sbjct: 61  HAKG-----ADIYVTLEPCSHYGKTPPCAELIINSGIKRVFVAMRDP 102


>gi|282880496|ref|ZP_06289203.1| riboflavin biosynthesis protein RibD [Prevotella timonensis CRIS
           5C-B1]
 gi|281305599|gb|EFA97652.1| riboflavin biosynthesis protein RibD [Prevotella timonensis CRIS
           5C-B1]
          Length = 314

 Score = 40.8 bits (94), Expect = 0.062,   Method: Compositional matrix adjust.
 Identities = 35/99 (35%), Positives = 46/99 (46%), Gaps = 12/99 (12%)

Query: 10  CALEEAQNAALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQ 68
           C     Q  AL    P VGAV V  ++II         +K   AHAE+ A     R   +
Sbjct: 16  CLQLAKQGRALAKPNPMVGAVLVCGDRIIGEG----YHIKYGEAHAEVNAF-AAVRQQDE 70

Query: 69  EILPEVDLYVTLEPCTM------CAAAISLARIRRLYYG 101
            +LPE  LYV+LEPC+       CA  I   R++R+  G
Sbjct: 71  HLLPESTLYVSLEPCSHYGKTPPCADLIVEKRVKRVVCG 109


>gi|54112139|gb|AAV28742.1| FCY1p [Cryptococcus gattii]
          Length = 232

 Score = 40.8 bits (94), Expect = 0.062,   Method: Compositional matrix adjust.
 Identities = 28/92 (30%), Positives = 43/92 (46%), Gaps = 11/92 (11%)

Query: 23  EIPVGA--VAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS------QEILP-- 72
           + P G   V   +++++    N+     +   H EI AI     +L+      QEIL   
Sbjct: 57  QAPFGTAIVNTTSDELVCVTSNKVGVTGNPAMHGEISAITHCTEVLTGQGWTPQEILAGW 116

Query: 73  -EVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
            ++ LY   EPC MCA+AI  A  + + YG S
Sbjct: 117 KDLSLYTNGEPCPMCASAIRWAGFKEVIYGTS 148


>gi|332529818|ref|ZP_08405772.1| cmp/dcmp deaminase zinc-binding protein [Hylemonella gracilis ATCC
           19624]
 gi|332040839|gb|EGI77211.1| cmp/dcmp deaminase zinc-binding protein [Hylemonella gracilis ATCC
           19624]
          Length = 158

 Score = 40.8 bits (94), Expect = 0.062,   Method: Compositional matrix adjust.
 Identities = 30/88 (34%), Positives = 39/88 (44%), Gaps = 10/88 (11%)

Query: 21  RNEI---PVGAVAVLNN--KIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVD 75
           R+E+   P GA+ V  +   +++  GN      D   HAE +  R        E L    
Sbjct: 16  RDELGRHPFGAILVAPDGETVLAEQGN-----VDTVNHAESVLARTAALNYPGEYLGRCT 70

Query: 76  LYVTLEPCTMCAAAISLARIRRLYYGAS 103
           L  T+EPC MCA     A I RL YG S
Sbjct: 71  LVTTVEPCAMCAGTQYWANIGRLVYGLS 98


>gi|330507217|ref|YP_004383645.1| hypothetical protein MCON_1091 [Methanosaeta concilii GP-6]
 gi|328928025|gb|AEB67827.1| conserved domain protein [Methanosaeta concilii GP-6]
          Length = 281

 Score = 40.8 bits (94), Expect = 0.062,   Method: Compositional matrix adjust.
 Identities = 34/123 (27%), Positives = 52/123 (42%), Gaps = 22/123 (17%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAV----LNNKIISRAGNRNRELK--DVTAHAEI 56
           +G+ +M  A   A+ +      P  A+ +      ++I+    N N+     D TAHAEI
Sbjct: 100 EGDRWMQLACLAARESVEEKGGPFAALILQIDNCTDQILRYWINHNQVTSALDPTAHAEI 159

Query: 57  LAIRMGC----------------RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
           +AIR  C                ++     L    +Y + EPC MC AAI  A I  L +
Sbjct: 160 MAIRSACASLGVFDLGSIRKDESKLAQPGDLSHCVIYSSAEPCPMCYAAICWANIPMLLF 219

Query: 101 GAS 103
            A+
Sbjct: 220 AAT 222


>gi|325180096|emb|CCA14498.1| hypothetical protein SELMODRAFT_438667 [Albugo laibachii Nc14]
          Length = 313

 Score = 40.8 bits (94), Expect = 0.062,   Method: Compositional matrix adjust.
 Identities = 15/45 (33%), Positives = 27/45 (60%)

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI 110
           L+  +    D+Y+ +EPC MCA A+  +R+RR+++   N   G +
Sbjct: 241 LTSYLCTSYDVYLDVEPCVMCAMALIHSRVRRVFFHERNHSHGAL 285


>gi|328767788|gb|EGF77836.1| hypothetical protein BATDEDRAFT_27114 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 379

 Score = 40.8 bits (94), Expect = 0.063,   Method: Compositional matrix adjust.
 Identities = 17/56 (30%), Positives = 34/56 (60%), Gaps = 1/56 (1%)

Query: 74  VDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIY 129
           +D+Y+T EPC MCA A+  +RI R++YG    + G + +  + +   + +H  +++
Sbjct: 316 LDMYLTREPCAMCAMALVHSRIGRVFYGERR-EYGALGSAYKLHVHPSINHHYQVF 370


>gi|134102530|ref|YP_001108191.1| guanine deaminase [Saccharopolyspora erythraea NRRL 2338]
 gi|291007103|ref|ZP_06565076.1| guanine deaminase [Saccharopolyspora erythraea NRRL 2338]
 gi|133915153|emb|CAM05266.1| guanine deaminase [Saccharopolyspora erythraea NRRL 2338]
          Length = 188

 Score = 40.8 bits (94), Expect = 0.063,   Method: Compositional matrix adjust.
 Identities = 29/126 (23%), Positives = 53/126 (42%), Gaps = 34/126 (26%)

Query: 25  PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQE--------------- 69
           P GAV     +I++R  NR     D TAH E+ AIR   ++L+ +               
Sbjct: 25  PFGAVITDGERIVARGQNRVLLTGDPTAHGEVEAIRKAVQVLNPDAPSIAEERQNGSTLA 84

Query: 70  ILPEVD-----------------LYVTLEPCTMCAAAISLARIRRLYYGAS--NPKGGGI 110
           ++P  +                 +Y +  PC MC +AI  +R+  ++Y +   + +  G 
Sbjct: 85  LVPRPEGSSDPMPARARMLKGHSIYTSGAPCPMCMSAIYWSRLDAVHYSSDLESTRAIGF 144

Query: 111 ENGTQF 116
           ++  Q+
Sbjct: 145 DDAFQY 150


>gi|54112173|gb|AAV28775.1| FCY1p [Cryptococcus gattii]
          Length = 232

 Score = 40.8 bits (94), Expect = 0.063,   Method: Compositional matrix adjust.
 Identities = 28/92 (30%), Positives = 43/92 (46%), Gaps = 11/92 (11%)

Query: 23  EIPVGA--VAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS------QEILP-- 72
           + P G   V   +++++    N+     +   H EI AI     +L+      QEIL   
Sbjct: 57  QAPFGTAIVNTTSDELVCVTSNKVGVTGNPAMHGEISAITHCTEVLTGQGWTPQEILAGW 116

Query: 73  -EVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
            ++ LY   EPC MCA+AI  A  + + YG S
Sbjct: 117 KDLSLYTNGEPCPMCASAIRWAGFKEVIYGTS 148


>gi|294675036|ref|YP_003575652.1| riboflavin biosynthesis protein RibD [Prevotella ruminicola 23]
 gi|294472928|gb|ADE82317.1| riboflavin biosynthesis protein RibD [Prevotella ruminicola 23]
          Length = 307

 Score = 40.8 bits (94), Expect = 0.064,   Method: Compositional matrix adjust.
 Identities = 36/104 (34%), Positives = 51/104 (49%), Gaps = 15/104 (14%)

Query: 7   FMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
           FM   ++ A+N  L N  P   VGAV V N +II    +    ++   AHAE+ A     
Sbjct: 7   FMQRCIQLAKNGQL-NAKPNPMVGAVIVHNGRIIGEGYH----VRCGLAHAEVNAF-ASV 60

Query: 64  RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYG 101
           R   + +LPE  +YV+LEPC+       CA  I    +RR+  G
Sbjct: 61  RAEDEALLPESTIYVSLEPCSHYGKTPPCADLIIEKGVRRVVVG 104


>gi|212212876|ref|YP_002303812.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Coxiella
           burnetii CbuG_Q212]
 gi|212011286|gb|ACJ18667.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Coxiella
           burnetii CbuG_Q212]
          Length = 354

 Score = 40.8 bits (94), Expect = 0.064,   Method: Compositional matrix adjust.
 Identities = 35/97 (36%), Positives = 47/97 (48%), Gaps = 21/97 (21%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR-MGCRILSQEILPEVDLYVTLEPCT 84
           VGAV V ++KIIS   ++   L     HAE+ AI+ +G +           LYVTLEPC 
Sbjct: 29  VGAVVVKDDKIISTGFHKRSGL----PHAEVEAIKSLGDKARGAA------LYVTLEPCC 78

Query: 85  M------CAAAISLARIRRLYYGASNPK----GGGIE 111
                  C   I  + I+ +YYG  +P     G GIE
Sbjct: 79  HFGKTPPCTDLIIQSGIKAVYYGLHDPNLAVCGKGIE 115


>gi|228973365|ref|ZP_04133953.1| Riboflavin biosynthesis protein [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228786345|gb|EEM34336.1| Riboflavin biosynthesis protein [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
          Length = 358

 Score = 40.8 bits (94), Expect = 0.065,   Method: Compositional matrix adjust.
 Identities = 44/149 (29%), Positives = 69/149 (46%), Gaps = 25/149 (16%)

Query: 8   MSCALEEAQNAALRNEIP----VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
           M  ALE A+  A++ +      VG+V V +N+I+    +    +K    HAEI AIRM  
Sbjct: 1   MKLALENAK--AMKGQTTPNPLVGSVIVNDNRIVGVGAH----MKAGEPHAEIHAIRM-- 52

Query: 64  RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFY 117
              + E      +YVTLEPC+       CA AI  A I+++     +P       G +  
Sbjct: 53  ---AGEQARGATIYVTLEPCSHYGRTGPCAEAIVQAGIKKVVVATLDPNPLVSGRGIKIL 109

Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDFFK 146
             A      E+  G+ E+ S+++ + F K
Sbjct: 110 QDAGI----EVLVGVCEEESKKMNEVFNK 134


>gi|254442809|ref|ZP_05056285.1| Cytidine and deoxycytidylate deaminase zinc-binding region domain
           protein [Verrucomicrobiae bacterium DG1235]
 gi|198257117|gb|EDY81425.1| Cytidine and deoxycytidylate deaminase zinc-binding region domain
           protein [Verrucomicrobiae bacterium DG1235]
          Length = 151

 Score = 40.8 bits (94), Expect = 0.065,   Method: Compositional matrix adjust.
 Identities = 38/114 (33%), Positives = 54/114 (47%), Gaps = 17/114 (14%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57
           +++   FM  A+ EA         P   VGAV V + +I+++ G+  R   D   HAE  
Sbjct: 4   IQRDESFMRAAVCEAVRGDAVKTSPNPRVGAVIVEDGEIVAK-GHFER---DGGPHAE-- 57

Query: 58  AIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP 105
             R     L ++      +YVTLEPC+       C  AI  A IRR+  GAS+P
Sbjct: 58  --RQALEALGRKPKEGAVIYVTLEPCSTQGRTGACTDAILEAGIRRVVVGASDP 109


>gi|56566286|gb|AAV98473.1| FCY1 [Cryptococcus neoformans var. neoformans]
          Length = 225

 Score = 40.8 bits (94), Expect = 0.066,   Method: Compositional matrix adjust.
 Identities = 29/92 (31%), Positives = 42/92 (45%), Gaps = 11/92 (11%)

Query: 23  EIPVGA--VAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL------SQEILP-- 72
           + P G   V   +++++    N+     +   H EI AI     +L      SQEIL   
Sbjct: 57  QAPFGTAIVNTTSDELVCVTSNKVGITGNPAMHGEISAITYCTEVLTAKGWTSQEILAGW 116

Query: 73  -EVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
            +  LY   EPC MCA+AI  A  + + YG S
Sbjct: 117 KDFSLYTNGEPCPMCASAIRWAGFKEVIYGTS 148


>gi|51245439|ref|YP_065323.1| hypothetical protein DP1587 [Desulfotalea psychrophila LSv54]
 gi|50876476|emb|CAG36316.1| unknown protein [Desulfotalea psychrophila LSv54]
          Length = 200

 Score = 40.8 bits (94), Expect = 0.066,   Method: Compositional matrix adjust.
 Identities = 25/81 (30%), Positives = 38/81 (46%), Gaps = 11/81 (13%)

Query: 57  LAIRMGCRILSQEILPEVDLYVTLEPC--------TMCAAAISLARIRRLYYGASNPKGG 108
           LA+RM  +IL+ +  PEV+L+    P         T   + ++  R+ R   GA  P  G
Sbjct: 59  LAVRMKKKILNYDEHPEVELFFGANPVAFHTIGTLTQTRSGVTAGRMHR--KGAFTPANG 116

Query: 109 GIENGTQFYTLATCHHSPEIY 129
           G+  G  F   ++ H  PE Y
Sbjct: 117 GL-GGRAFIRASSKHFKPEFY 136


>gi|58265894|ref|XP_570103.1| cytosine deaminase [Cryptococcus neoformans var. neoformans JEC21]
 gi|134110332|ref|XP_775993.1| hypothetical protein CNBD0430 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|50258661|gb|EAL21346.1| hypothetical protein CNBD0430 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|56566313|gb|AAV98489.1| FCY1 [Cryptococcus neoformans var. neoformans]
 gi|57226336|gb|AAW42796.1| cytosine deaminase, putative [Cryptococcus neoformans var.
           neoformans JEC21]
          Length = 225

 Score = 40.8 bits (94), Expect = 0.066,   Method: Compositional matrix adjust.
 Identities = 29/92 (31%), Positives = 42/92 (45%), Gaps = 11/92 (11%)

Query: 23  EIPVGA--VAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL------SQEILP-- 72
           + P G   V   +++++    N+     +   H EI AI     +L      SQEIL   
Sbjct: 57  QAPFGTAIVNTTSDELVCVTSNKVGITGNPAMHGEISAITYCTEVLTAKGWTSQEILAGW 116

Query: 73  -EVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
            +  LY   EPC MCA+AI  A  + + YG S
Sbjct: 117 KDFSLYTNGEPCPMCASAIRWAGFKEVIYGTS 148


>gi|289549140|ref|YP_003474128.1| riboflavin biosynthesis protein RibD [Thermocrinis albus DSM 14484]
 gi|289182757|gb|ADC90001.1| riboflavin biosynthesis protein RibD [Thermocrinis albus DSM 14484]
          Length = 353

 Score = 40.8 bits (94), Expect = 0.067,   Method: Compositional matrix adjust.
 Identities = 38/131 (29%), Positives = 60/131 (45%), Gaps = 29/131 (22%)

Query: 26  VGAVAVLNNKIIS-----RAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80
           VG V V + KIIS     RAG           HAE++A+       + +   +  LYVTL
Sbjct: 21  VGCVVVKDGKIISEGYHERAG---------APHAEVVALSK-----AGQNAKDSTLYVTL 66

Query: 81  EPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISE 134
           EPC+       C  AI  A ++R+     +P    + +G +    A      ++  G+ E
Sbjct: 67  EPCSHYGRTPPCTNAIIEAGVKRVVVATLDPNPKVMGSGIERLRAAGI----QVDVGVLE 122

Query: 135 QRSRQIIQDFF 145
           + +RQ+ +DFF
Sbjct: 123 EEARQLNEDFF 133


>gi|323488255|ref|ZP_08093505.1| riboflavin biosynthesis protein RibD [Planococcus donghaensis
           MPA1U2]
 gi|323398113|gb|EGA90909.1| riboflavin biosynthesis protein RibD [Planococcus donghaensis
           MPA1U2]
          Length = 367

 Score = 40.8 bits (94), Expect = 0.067,   Method: Compositional matrix adjust.
 Identities = 46/155 (29%), Positives = 70/155 (45%), Gaps = 23/155 (14%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57
           M   + +M+ AL  AQ    + + P   VG+V V +N+I+         LK    HAEI 
Sbjct: 1   MSNHDFYMNLALTNAQTLKGQTD-PNPLVGSVIVNDNRIVGIG----THLKAGEPHAEIH 55

Query: 58  AIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIE 111
           A+RM    +SQ       +YVTLEPC+       CA AI  A I ++     +P      
Sbjct: 56  ALRMAGD-MSQG----ATIYVTLEPCSHFGRTGPCAQAIIDAGIEKVVIATLDPNPIVAG 110

Query: 112 NGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
           NG +    A      E+  G+ E+ + ++ + F K
Sbjct: 111 NGVRMLKEAGI----EVIVGVREEEAIKMNEVFNK 141


>gi|261855451|ref|YP_003262734.1| CMP/dCMP deaminase zinc-binding protein [Halothiobacillus
           neapolitanus c2]
 gi|261835920|gb|ACX95687.1| CMP/dCMP deaminase zinc-binding protein [Halothiobacillus
           neapolitanus c2]
          Length = 178

 Score = 40.8 bits (94), Expect = 0.067,   Method: Compositional matrix adjust.
 Identities = 32/110 (29%), Positives = 46/110 (41%), Gaps = 13/110 (11%)

Query: 49  DVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPK-- 106
           D   HAE    R+     S E L +  LY  +EPC MCA     A I R+ +  +  +  
Sbjct: 60  DTVNHAESTLARVAATNYSPEFLWQCTLYTAVEPCCMCAGTAYWANIGRVVFAMTEEQLL 119

Query: 107 ---GGGIENGT----QFYTLATCHHSPEIYPGISE---QRSRQIIQDFFK 146
              G   EN T      Y  A     P +  G  E   + +RQ+ +DF++
Sbjct: 120 AETGNHHENPTMSVSSHYVYAHG-QKPVVLIGPVEELIEETRQVHRDFWR 168


>gi|321262599|ref|XP_003196018.1| cytosine deaminase [Cryptococcus gattii WM276]
 gi|317462493|gb|ADV24231.1| cytosine deaminase, putative [Cryptococcus gattii WM276]
          Length = 252

 Score = 40.8 bits (94), Expect = 0.068,   Method: Compositional matrix adjust.
 Identities = 28/92 (30%), Positives = 43/92 (46%), Gaps = 11/92 (11%)

Query: 23  EIPVGA--VAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS------QEILP-- 72
           + P G   V   +++++    N+     +   H EI AI     +L+      QEIL   
Sbjct: 57  QAPFGTAIVNTTSDELVCVTSNKVGVTGNPAMHGEISAITHCTEVLTGQGWTPQEILAGW 116

Query: 73  -EVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
            ++ LY   EPC MCA+AI  A  + + YG S
Sbjct: 117 KDLSLYTNGEPCPMCASAIRWAGFKEVIYGTS 148


>gi|319651135|ref|ZP_08005268.1| riboflavin specific deaminase [Bacillus sp. 2_A_57_CT2]
 gi|317397189|gb|EFV77894.1| riboflavin specific deaminase [Bacillus sp. 2_A_57_CT2]
          Length = 365

 Score = 40.8 bits (94), Expect = 0.068,   Method: Compositional matrix adjust.
 Identities = 33/96 (34%), Positives = 45/96 (46%), Gaps = 19/96 (19%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85
           VGAV V N +I+    +    LK  T HAE+ AI               D+YVTLEPC+ 
Sbjct: 27  VGAVVVKNGEILGMGAH----LKAGTPHAEVHAIAAAGEKAKG-----ADIYVTLEPCSH 77

Query: 86  ------CAAAISLARIRRLYYGASNP----KGGGIE 111
                 CA  I  + I R++  +++P     G GIE
Sbjct: 78  FGRTPPCADLIINSGINRVFIASADPNPLVSGKGIE 113


>gi|170037228|ref|XP_001846461.1| cytidine and deoxycytidylate deaminase zinc-binding region [Culex
           quinquefasciatus]
 gi|167880295|gb|EDS43678.1| cytidine and deoxycytidylate deaminase zinc-binding region [Culex
           quinquefasciatus]
          Length = 377

 Score = 40.8 bits (94), Expect = 0.068,   Method: Compositional matrix adjust.
 Identities = 14/33 (42%), Positives = 24/33 (72%)

Query: 75  DLYVTLEPCTMCAAAISLARIRRLYYGASNPKG 107
           D+Y+T EPC MCA A++ +R+RR+++     +G
Sbjct: 321 DVYLTHEPCIMCAMALTHSRVRRVFFHRKTSRG 353


>gi|29653981|ref|NP_819673.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Coxiella
           burnetii RSA 493]
 gi|29541244|gb|AAO90187.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Coxiella
           burnetii RSA 493]
          Length = 354

 Score = 40.8 bits (94), Expect = 0.068,   Method: Compositional matrix adjust.
 Identities = 35/97 (36%), Positives = 47/97 (48%), Gaps = 21/97 (21%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR-MGCRILSQEILPEVDLYVTLEPCT 84
           VGAV V ++KIIS   ++   L     HAE+ AI+ +G +           LYVTLEPC 
Sbjct: 29  VGAVVVKDDKIISTGFHKRSGL----PHAEVEAIKSLGDKARGAA------LYVTLEPCC 78

Query: 85  M------CAAAISLARIRRLYYGASNPK----GGGIE 111
                  C   I  + I+ +YYG  +P     G GIE
Sbjct: 79  HFGKTPPCTDLIIQSGIKAVYYGLHDPNLAVCGKGIE 115


>gi|153209016|ref|ZP_01947210.1| riboflavin biosynthesis protein RibD [Coxiella burnetii 'MSU Goat
           Q177']
 gi|165920291|ref|ZP_02219563.1| riboflavin biosynthesis protein RibD [Coxiella burnetii RSA 334]
 gi|212219122|ref|YP_002305909.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Coxiella
           burnetii CbuK_Q154]
 gi|120575553|gb|EAX32177.1| riboflavin biosynthesis protein RibD [Coxiella burnetii 'MSU Goat
           Q177']
 gi|165916847|gb|EDR35451.1| riboflavin biosynthesis protein RibD [Coxiella burnetii RSA 334]
 gi|212013384|gb|ACJ20764.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Coxiella
           burnetii CbuK_Q154]
          Length = 354

 Score = 40.8 bits (94), Expect = 0.069,   Method: Compositional matrix adjust.
 Identities = 35/97 (36%), Positives = 47/97 (48%), Gaps = 21/97 (21%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR-MGCRILSQEILPEVDLYVTLEPCT 84
           VGAV V ++KIIS   ++   L     HAE+ AI+ +G +           LYVTLEPC 
Sbjct: 29  VGAVVVKDDKIISTGFHKRSGL----PHAEVEAIKSLGDKARGAA------LYVTLEPCC 78

Query: 85  M------CAAAISLARIRRLYYGASNPK----GGGIE 111
                  C   I  + I+ +YYG  +P     G GIE
Sbjct: 79  HFGKTPPCTDLIIQSGIKAVYYGLHDPNLAVCGKGIE 115


>gi|260464042|ref|ZP_05812237.1| CMP/dCMP deaminase zinc-binding [Mesorhizobium opportunistum
           WSM2075]
 gi|259030213|gb|EEW31494.1| CMP/dCMP deaminase zinc-binding [Mesorhizobium opportunistum
           WSM2075]
          Length = 156

 Score = 40.8 bits (94), Expect = 0.069,   Method: Compositional matrix adjust.
 Identities = 33/109 (30%), Positives = 45/109 (41%), Gaps = 8/109 (7%)

Query: 1   MKKGNVF--MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEIL 57
           M +  +F  +  A + A++AA     P G V V  +++I+   GN +        HAE  
Sbjct: 1   MTRDRMFAHLRAANDVARDAAAHGHHPFGCVLVGPDDRILMGQGNIS-----TVRHAETK 55

Query: 58  AIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPK 106
             R        E L    L  T EPC MC   +  A I RL YG    K
Sbjct: 56  LARRAADAYPPEFLWSCTLVSTGEPCAMCTGTLYWANIGRLVYGFEETK 104


>gi|159464651|ref|XP_001690555.1| hypothetical protein CHLREDRAFT_144229 [Chlamydomonas reinhardtii]
 gi|158280055|gb|EDP05814.1| predicted protein [Chlamydomonas reinhardtii]
          Length = 420

 Score = 40.8 bits (94), Expect = 0.070,   Method: Compositional matrix adjust.
 Identities = 15/55 (27%), Positives = 33/55 (60%)

Query: 75  DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIY 129
           D+++  EPC MCA  +  +R++R+ Y  S+P+ G +    + +   + +H+ E++
Sbjct: 347 DIFLVREPCIMCAMGLVHSRVQRVIYCQSDPQHGALGGRQRLHACKSLNHNYEVF 401


>gi|268572593|ref|XP_002641361.1| Hypothetical protein CBG13218 [Caenorhabditis briggsae]
          Length = 294

 Score = 40.8 bits (94), Expect = 0.070,   Method: Compositional matrix adjust.
 Identities = 18/53 (33%), Positives = 31/53 (58%)

Query: 75  DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
           D+++  EPC MC+ A+   RI+RL+Y  S+  G   ++G Q +   + +H  E
Sbjct: 212 DVFLLNEPCAMCSMALVHFRIKRLFYVISSRNGVLKDDGWQLHLEPSINHHYE 264


>gi|328886795|emb|CCA60034.1| cytidine or deoxycytidine deaminase [Streptomyces venezuelae ATCC
           10712]
          Length = 145

 Score = 40.4 bits (93), Expect = 0.072,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 45/102 (44%), Gaps = 8/102 (7%)

Query: 15  AQNAALRNEIPVGAV-AVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPE 73
           A  A    + P G++ A  +  +++ A N  R   D+TAH E+   R   R L+ E    
Sbjct: 17  AARAVTLGDAPYGSLLAGPDGTVLAEAHNTVRRDNDITAHPELKLARWAARELAPETAAG 76

Query: 74  VDLYVTLEPCTMCAAAISLARIRRLYYGAS-------NPKGG 108
             LY + +PC MC   I  + I R+ Y  S       NP  G
Sbjct: 77  TTLYTSCQPCGMCGGGIIRSGIGRVVYALSTEQLVELNPPSG 118


>gi|302671281|ref|YP_003831241.1| CMP/dCMP deaminase zinc-binding domain-containing protein
           [Butyrivibrio proteoclasticus B316]
 gi|302395754|gb|ADL34659.1| CMP/dCMP deaminase zinc-binding domain-containing protein
           [Butyrivibrio proteoclasticus B316]
          Length = 172

 Score = 40.4 bits (93), Expect = 0.072,   Method: Compositional matrix adjust.
 Identities = 27/97 (27%), Positives = 43/97 (44%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M    E A +A  +     GAV V + KI+  A N     K +  HAE   +       
Sbjct: 8   YMKRCYELAISAGKKGFDTFGAVLVCDGKILEEAENTADFEKKIFGHAEFNLVHKCANKY 67

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
           + +IL +  +Y +  PC  C AAI+   + ++  G S
Sbjct: 68  TDDILEKSVVYTSCAPCERCLAAIASLGVHKVVCGVS 104


>gi|327399584|ref|YP_004340453.1| riboflavin biosynthesis protein RibD [Hippea maritima DSM 10411]
 gi|327182213|gb|AEA34394.1| riboflavin biosynthesis protein RibD [Hippea maritima DSM 10411]
          Length = 375

 Score = 40.4 bits (93), Expect = 0.073,   Method: Compositional matrix adjust.
 Identities = 40/123 (32%), Positives = 58/123 (47%), Gaps = 20/123 (16%)

Query: 1   MKKGNVFMSCALE---EAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57
           M K  +FM  A+E   +A+N    N + VGAV V   KII +  ++   L     HAE+ 
Sbjct: 13  MNKDELFMKKAIELAKKAKNKTCPNPL-VGAVIVKEGKIIGQGYHKKAGL----PHAEVE 67

Query: 58  AIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASN---PKGG 108
           AI     +  +  L +  +YV LEPC        C+ AI  + I+R+  G  +      G
Sbjct: 68  AIN---SVKDRNQLKDATIYVNLEPCNHYGRTPPCSLAIINSGIKRVVIGMRDINKKASG 124

Query: 109 GIE 111
           GIE
Sbjct: 125 GIE 127


>gi|271969361|ref|YP_003343557.1| guanine deaminase [Streptosporangium roseum DSM 43021]
 gi|270512536|gb|ACZ90814.1| guanine deaminase [Streptosporangium roseum DSM 43021]
          Length = 157

 Score = 40.4 bits (93), Expect = 0.073,   Method: Compositional matrix adjust.
 Identities = 24/78 (30%), Positives = 36/78 (46%), Gaps = 1/78 (1%)

Query: 24  IPVGAVAVLNNKIISRAG-NRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEP 82
           IP   + V     +  +G NR R  +D TAHAEI+A+R   R      L    L  + EP
Sbjct: 30  IPFAGLVVDGTGTVLGSGVNRVRAHRDPTAHAEIVALREAAREHGPHALAGTTLLASGEP 89

Query: 83  CTMCAAAISLARIRRLYY 100
           C +C      + + R+ +
Sbjct: 90  CPLCYVTALWSGVSRIVF 107


>gi|269856949|gb|ACZ51498.1| FCY1p [Cryptococcus heveanensis]
          Length = 231

 Score = 40.4 bits (93), Expect = 0.074,   Method: Compositional matrix adjust.
 Identities = 29/92 (31%), Positives = 43/92 (46%), Gaps = 11/92 (11%)

Query: 23  EIPVGA--VAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS------QEILP-- 72
           + P G+  V   ++++I    N+     +   H EI AI     +L+      QEIL   
Sbjct: 60  QAPFGSAIVNTTSDELICVTSNKVGVTGNPAMHGEISAITHCTDVLTKKGLSPQEILASW 119

Query: 73  -EVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
            +  LY   EPC MCA+AI  A  + + YG S
Sbjct: 120 KDFSLYTNGEPCPMCASAIRWAGFKEVIYGTS 151


>gi|332524984|ref|ZP_08401168.1| cmp/dcmp deaminase zinc-binding protein [Rubrivivax benzoatilyticus
           JA2]
 gi|332108277|gb|EGJ09501.1| cmp/dcmp deaminase zinc-binding protein [Rubrivivax benzoatilyticus
           JA2]
          Length = 161

 Score = 40.4 bits (93), Expect = 0.075,   Method: Compositional matrix adjust.
 Identities = 32/103 (31%), Positives = 45/103 (43%), Gaps = 14/103 (13%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILA 58
           +++ N   + AL E ++       P GAV V    + ++   GN +        HAE + 
Sbjct: 13  LRRANEVAARALAEGRH-------PFGAVLVGPDGDTVLLEQGNVS-----AVEHAEAVL 60

Query: 59  IRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
            R   R  + E L    L  T+EPC MCA     A I RL YG
Sbjct: 61  AREAARRWAPEFLAGCTLVTTVEPCAMCAGTQYWAGIGRLVYG 103


>gi|152981769|ref|YP_001352932.1| cytosine/adenosine deaminase [Janthinobacterium sp. Marseille]
 gi|151281846|gb|ABR90256.1| cytosine/adenosine deaminase [Janthinobacterium sp. Marseille]
          Length = 169

 Score = 40.4 bits (93), Expect = 0.075,   Method: Compositional matrix adjust.
 Identities = 33/91 (36%), Positives = 46/91 (50%), Gaps = 2/91 (2%)

Query: 15  AQNAALRNEIPVGA-VAVLNNKIISRAGNRNRELK-DVTAHAEILAIRMGCRILSQEILP 72
           ++ +  R   P  A VA  +  +I  AGN +   + D T HAE+LA     + LS E L 
Sbjct: 27  SEESKQRGRHPFAALVADEHGNVIVTAGNNSMPPEGDPTQHAELLAAARAAQKLSPEQLA 86

Query: 73  EVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
           +  LY + EPC MC+ AI    I R+ Y  S
Sbjct: 87  KSTLYTSAEPCCMCSGAIYWTGIGRVVYALS 117


>gi|83754218|pdb|2B3Z|A Chain A, Crystal Structure Of A Bifunctional Deaminase And
           Reductase Involved In Riboflavin Biosynthesis
 gi|83754219|pdb|2B3Z|B Chain B, Crystal Structure Of A Bifunctional Deaminase And
           Reductase Involved In Riboflavin Biosynthesis
 gi|83754220|pdb|2B3Z|C Chain C, Crystal Structure Of A Bifunctional Deaminase And
           Reductase Involved In Riboflavin Biosynthesis
 gi|83754221|pdb|2B3Z|D Chain D, Crystal Structure Of A Bifunctional Deaminase And
           Reductase Involved In Riboflavin Biosynthesis
 gi|83754933|pdb|2D5N|A Chain A, Crystal Structure Of A Bifunctional Deaminase And
           Reductase Involved In Riboflavin Biosynthesis
 gi|83754934|pdb|2D5N|B Chain B, Crystal Structure Of A Bifunctional Deaminase And
           Reductase Involved In Riboflavin Biosynthesis
 gi|83754935|pdb|2D5N|C Chain C, Crystal Structure Of A Bifunctional Deaminase And
           Reductase Involved In Riboflavin Biosynthesis
 gi|83754936|pdb|2D5N|D Chain D, Crystal Structure Of A Bifunctional Deaminase And
           Reductase Involved In Riboflavin Biosynthesis
 gi|211939446|pdb|3EX8|A Chain A, Complex Structure Of Bacillus Subtilis Ribg Reduction
           Mechanism In Riboflavin Biosynthesis
 gi|211939447|pdb|3EX8|B Chain B, Complex Structure Of Bacillus Subtilis Ribg Reduction
           Mechanism In Riboflavin Biosynthesis
 gi|211939448|pdb|3EX8|C Chain C, Complex Structure Of Bacillus Subtilis Ribg Reduction
           Mechanism In Riboflavin Biosynthesis
 gi|211939449|pdb|3EX8|D Chain D, Complex Structure Of Bacillus Subtilis Ribg Reduction
           Mechanism In Riboflavin Biosynthesis
          Length = 373

 Score = 40.4 bits (93), Expect = 0.075,   Method: Compositional matrix adjust.
 Identities = 34/107 (31%), Positives = 50/107 (46%), Gaps = 17/107 (15%)

Query: 7   FMSCALEEAQNAALRNEIP--VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           +M  AL+ A+    + E    VGAV V + +I+    +    LK   AHAE+ AI M   
Sbjct: 17  YMKLALDLAKQGEGQTESNPLVGAVVVKDGQIVGMGAH----LKYGEAHAEVHAIHMAGA 72

Query: 65  ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP 105
                     D+YVTLEPC+       CA  I  + I+R++    +P
Sbjct: 73  HAEG-----ADIYVTLEPCSHYGKTPPCAELIINSGIKRVFVAMRDP 114


>gi|260665250|ref|ZP_05866099.1| riboflavin biosynthesis protein RibD [Lactobacillus jensenii
           SJ-7A-US]
 gi|313472797|ref|ZP_07813285.1| riboflavin biosynthesis protein RibD [Lactobacillus jensenii 1153]
 gi|260560987|gb|EEX26962.1| riboflavin biosynthesis protein RibD [Lactobacillus jensenii
           SJ-7A-US]
 gi|313448878|gb|EEQ68026.2| riboflavin biosynthesis protein RibD [Lactobacillus jensenii 1153]
          Length = 352

 Score = 40.4 bits (93), Expect = 0.076,   Method: Compositional matrix adjust.
 Identities = 38/124 (30%), Positives = 56/124 (45%), Gaps = 22/124 (17%)

Query: 1   MKKGNVFMSCALEEAQNA---ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57
           MK    FM  AL EA         N + VGAV V +N++++  G  +R       + ++ 
Sbjct: 2   MKTDEDFMGLALTEASKGRYHTWTNPM-VGAVVVKDNQVLA-TGYHHR-------YGDVH 52

Query: 58  AIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPK----G 107
           A R     L+ E L    LYVTLEPC        C+  I  ++I+R+     +P     G
Sbjct: 53  AERDAISKLTPEQLFNSTLYVTLEPCNHTGKQPPCSDLIIASKIKRVVISEIDPHSLVTG 112

Query: 108 GGIE 111
            GI+
Sbjct: 113 KGIK 116


>gi|238855788|ref|ZP_04646080.1| riboflavin biosynthesis protein RibD [Lactobacillus jensenii 269-3]
 gi|282934748|ref|ZP_06339990.1| riboflavin biosynthesis protein RibD [Lactobacillus jensenii 208-1]
 gi|238831564|gb|EEQ23909.1| riboflavin biosynthesis protein RibD [Lactobacillus jensenii 269-3]
 gi|281301189|gb|EFA93491.1| riboflavin biosynthesis protein RibD [Lactobacillus jensenii 208-1]
          Length = 359

 Score = 40.4 bits (93), Expect = 0.077,   Method: Compositional matrix adjust.
 Identities = 38/124 (30%), Positives = 56/124 (45%), Gaps = 22/124 (17%)

Query: 1   MKKGNVFMSCALEEAQNA---ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57
           MK    FM  AL EA         N + VGAV V +N++++  G  +R       + ++ 
Sbjct: 9   MKTDEDFMGLALTEASKGRYHTWTNPM-VGAVVVKDNQVLA-TGYHHR-------YGDVH 59

Query: 58  AIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPK----G 107
           A R     L+ E L    LYVTLEPC        C+  I  ++I+R+     +P     G
Sbjct: 60  AERDAISKLTPEQLFNSTLYVTLEPCNHTGKQPPCSDLIIASKIKRVVISEIDPHSLVTG 119

Query: 108 GGIE 111
            GI+
Sbjct: 120 KGIK 123


>gi|91216505|ref|ZP_01253471.1| riboflavin biosynthesis protein ribD [Psychroflexus torquis ATCC
           700755]
 gi|91185299|gb|EAS71676.1| riboflavin biosynthesis protein ribD [Psychroflexus torquis ATCC
           700755]
          Length = 347

 Score = 40.4 bits (93), Expect = 0.077,   Method: Compositional matrix adjust.
 Identities = 36/114 (31%), Positives = 52/114 (45%), Gaps = 17/114 (14%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57
           MK    ++   LE A N  L    P   VG V V N++II    +    +K    HAE+ 
Sbjct: 1   MKTNEFYIKRCLELAANG-LGTTYPNPLVGCVIVYNDRIIGEGWH----IKAGDDHAEVR 55

Query: 58  AIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP 105
           AI     +  Q +L +  LYVTLEPC+       C+  I   +I ++  G  +P
Sbjct: 56  AIN---SVKDQSLLKKSILYVTLEPCSHYGKTPPCSDLIIEKKIPKIVIGTLDP 106


>gi|295399034|ref|ZP_06809016.1| riboflavin biosynthesis protein RibD [Geobacillus
           thermoglucosidasius C56-YS93]
 gi|312110361|ref|YP_003988677.1| riboflavin biosynthesis protein RibD [Geobacillus sp. Y4.1MC1]
 gi|294978500|gb|EFG54096.1| riboflavin biosynthesis protein RibD [Geobacillus
           thermoglucosidasius C56-YS93]
 gi|311215462|gb|ADP74066.1| riboflavin biosynthesis protein RibD [Geobacillus sp. Y4.1MC1]
          Length = 361

 Score = 40.4 bits (93), Expect = 0.077,   Method: Compositional matrix adjust.
 Identities = 40/124 (32%), Positives = 58/124 (46%), Gaps = 23/124 (18%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57
           M+    +M  A+E A+ A +    P   VGAV V + +I+    +    LK    HAE+ 
Sbjct: 1   MRNDEQYMRLAIEMAK-AGIGQTSPNPIVGAVVVNSGEIVGFGAH----LKAGEPHAEVH 55

Query: 58  AIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPK----G 107
           AIRM     + E      +YVTLEPC+       CA  +  A +RR+    ++P     G
Sbjct: 56  AIRM-----AGEKAKGATVYVTLEPCSHYGKTPPCADLLIDAGVRRVVIATTDPNPLVAG 110

Query: 108 GGIE 111
            GIE
Sbjct: 111 KGIE 114


>gi|228934673|ref|ZP_04097506.1| Riboflavin biosynthesis protein [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228824925|gb|EEM70724.1| Riboflavin biosynthesis protein [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
          Length = 360

 Score = 40.4 bits (93), Expect = 0.077,   Method: Compositional matrix adjust.
 Identities = 44/149 (29%), Positives = 70/149 (46%), Gaps = 25/149 (16%)

Query: 8   MSCALEEAQNAALRNEIP----VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
           M  ALE A+  A++ +      VG+V V +N+I+    +    +K    HAEI AIRM  
Sbjct: 1   MKLALENAK--AMKGQTTPNPLVGSVIVNDNRIVGIGAH----MKAGEPHAEIHAIRM-- 52

Query: 64  RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFY 117
              + E      +YVTLEPC+       CA AI  A I+++     +P       G +  
Sbjct: 53  ---AGEQARGGTIYVTLEPCSHHGRTGPCAEAIVQAGIKKVVVATLDPNPLVSGRGIKIL 109

Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDFFK 146
             A      E+  G+ E++S+++ + F K
Sbjct: 110 QDAGI----EVLVGVCEEKSKKMNEVFNK 134


>gi|284043910|ref|YP_003394250.1| CMP/dCMP deaminase zinc-binding protein [Conexibacter woesei DSM
           14684]
 gi|283948131|gb|ADB50875.1| CMP/dCMP deaminase zinc-binding protein [Conexibacter woesei DSM
           14684]
          Length = 195

 Score = 40.4 bits (93), Expect = 0.079,   Method: Compositional matrix adjust.
 Identities = 39/139 (28%), Positives = 58/139 (41%), Gaps = 17/139 (12%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKD---VTAHAEILAI 59
            G V++SC L  A  A       VGAV V + +++  A  RNR L+       HAE  A+
Sbjct: 34  DGFVWLSCTL--ALEAMEAGNYGVGAVLVRDGEVV--AEGRNRLLEPYVRTDCHAETEAV 89

Query: 60  -RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
            +   R           L+ +LE C MC   +    IR +YY A +  GG          
Sbjct: 90  DQFEARFRDFPDATGTVLWTSLECCPMCTVRLINTGIREVYYAAPDADGG---------M 140

Query: 119 LATCHHSPEIYPGISEQRS 137
           L+     P  + G++ +R 
Sbjct: 141 LSRWDGLPPFWRGLAARRD 159


>gi|221058419|ref|XP_002259855.1| cytidine and deoxycytidylate deaminase family [Plasmodium knowlesi
           strain H]
 gi|193809928|emb|CAQ41122.1| cytidine and deoxycytidylate deaminase family,putative [Plasmodium
           knowlesi strain H]
          Length = 245

 Score = 40.4 bits (93), Expect = 0.080,   Method: Compositional matrix adjust.
 Identities = 24/78 (30%), Positives = 37/78 (47%)

Query: 69  EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEI 128
           E L +  + VT EPC MC  A+ L  IR +Y+   N + GG  +    +      +   I
Sbjct: 152 ENLRKCCIVVTCEPCIMCVYALKLMGIRNIYFCCLNERFGGCGSVLSLHKTYQDINVNYI 211

Query: 129 YPGISEQRSRQIIQDFFK 146
             G   +RS  ++Q F+K
Sbjct: 212 KSGGCTERSISLMQSFYK 229


>gi|317056285|ref|YP_004104752.1| riboflavin biosynthesis protein RibD [Ruminococcus albus 7]
 gi|315448554|gb|ADU22118.1| riboflavin biosynthesis protein RibD [Ruminococcus albus 7]
          Length = 369

 Score = 40.4 bits (93), Expect = 0.081,   Method: Compositional matrix adjust.
 Identities = 39/132 (29%), Positives = 58/132 (43%), Gaps = 26/132 (19%)

Query: 26  VGAVAVLNNKIIS-----RAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80
           VGAV V +  II+     R G+ + E    +A AE  A  + CR          D+YVTL
Sbjct: 27  VGAVIVRDGNIIASGYHKRYGDLHAER---SAFAECDAKDIDCR--------GADMYVTL 75

Query: 81  EPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISE 134
           EPC        C  A+    I+R++ G+S+P       GT         H  E+  G+ +
Sbjct: 76  EPCCHHGKQPPCTDAVIEHGIKRVFVGSSDPNPLVAGKGTAILR----EHGIEVTEGVLK 131

Query: 135 QRSRQIIQDFFK 146
               ++ + FFK
Sbjct: 132 DECDRLNEIFFK 143


>gi|297569249|ref|YP_003690593.1| riboflavin biosynthesis protein RibD [Desulfurivibrio alkaliphilus
           AHT2]
 gi|296925164|gb|ADH85974.1| riboflavin biosynthesis protein RibD [Desulfurivibrio alkaliphilus
           AHT2]
          Length = 368

 Score = 40.4 bits (93), Expect = 0.081,   Method: Compositional matrix adjust.
 Identities = 35/108 (32%), Positives = 51/108 (47%), Gaps = 19/108 (17%)

Query: 7   FMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
           +M  ALE A+    +   P   VGAV V + +++ R  +R    +    HAEI       
Sbjct: 9   YMKMALELARKGVGKTS-PNPCVGAVLVKDGQVVGRGWHR----RAGEPHAEI-----NA 58

Query: 64  RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP 105
              + ++     +YVTLEPC        C+ AI  A IRR+ YG S+P
Sbjct: 59  LAAAGDLAGGATIYVTLEPCNHQGRTPPCSKAIEAAGIRRVVYGMSDP 106


>gi|321311800|ref|YP_004204087.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino) uracil
           reductase [Bacillus subtilis BSn5]
 gi|320018074|gb|ADV93060.1| fused diaminohydroxyphosphoribosylaminopyrimidine deaminase;
           5-amino-6-(5-phosphoribosylamino) uracil reductase
           [Bacillus subtilis BSn5]
          Length = 361

 Score = 40.4 bits (93), Expect = 0.081,   Method: Compositional matrix adjust.
 Identities = 34/107 (31%), Positives = 50/107 (46%), Gaps = 17/107 (15%)

Query: 7   FMSCALEEAQNAALRNEIP--VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           +M  AL+ A+    + E    VGAV V + +I+    +    LK   AHAE+ AI M   
Sbjct: 5   YMKLALDLAKQGEGQTESNPLVGAVVVKDGQIVGMGAH----LKYGEAHAEVHAIHMAGA 60

Query: 65  ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP 105
                     D+YVTLEPC+       CA  I  + I+R++    +P
Sbjct: 61  HAEG-----ADIYVTLEPCSHYGKTPPCAELIINSGIKRVFVAMRDP 102


>gi|50365203|ref|YP_053628.1| deoxycytidylate deaminase [Mesoplasma florum L1]
 gi|50363759|gb|AAT75744.1| deoxycytidylate deaminase [Mesoplasma florum L1]
          Length = 157

 Score = 40.4 bits (93), Expect = 0.081,   Method: Compositional matrix adjust.
 Identities = 37/108 (34%), Positives = 52/108 (48%), Gaps = 27/108 (25%)

Query: 15  AQNAALRNEIP---VGAVAVLN-NKIISRAGN--------------RNRELKDV----TA 52
           A+  A+R++ P   VGA+ V N N+IIS   N              R  E  D      A
Sbjct: 17  AKVCAMRSKDPSTQVGAILVNNLNQIISTGYNGFPRGVNDDEFPWTREGEWIDTKYPYVA 76

Query: 53  HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
           HAE+ AI     + ++  L + D+YVTL PC  C   I  A I+++YY
Sbjct: 77  HAELNAI-----VSARTNLTDSDVYVTLFPCNECTKIIIQAGIKKVYY 119


>gi|149372326|ref|ZP_01891514.1| riboflavin biosynthesis protein ribD [unidentified eubacterium
           SCB49]
 gi|149354716|gb|EDM43279.1| riboflavin biosynthesis protein ribD [unidentified eubacterium
           SCB49]
          Length = 340

 Score = 40.4 bits (93), Expect = 0.083,   Method: Compositional matrix adjust.
 Identities = 26/86 (30%), Positives = 46/86 (53%), Gaps = 13/86 (15%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85
           VG+V V+++KII    +    L+    HAE+ AI     +  +++L +  +YV+LEPC+ 
Sbjct: 21  VGSVIVVDDKIIGEGWH----LEAGKPHAEVNAIN---SVTDEKLLEKATIYVSLEPCSH 73

Query: 86  ------CAAAISLARIRRLYYGASNP 105
                 CA  I    I+ +  G+++P
Sbjct: 74  FGKTPPCADLIVTKGIKNIVIGSTDP 99


>gi|254491989|ref|ZP_05105167.1| riboflavin biosynthesis protein RibD [Methylophaga thiooxidans
           DMS010]
 gi|224462804|gb|EEF79075.1| riboflavin biosynthesis protein RibD [Methylophaga thiooxydans
           DMS010]
          Length = 368

 Score = 40.4 bits (93), Expect = 0.083,   Method: Compositional matrix adjust.
 Identities = 38/137 (27%), Positives = 62/137 (45%), Gaps = 25/137 (18%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85
           VG V V N++II    +    ++    HAE+ AI+              D YVTLEPC+ 
Sbjct: 28  VGCVIVKNDEIIGEGWH----MRAGEGHAEVNAIQAAGHAAEG-----ADCYVTLEPCSH 78

Query: 86  ------CAAAISLARIRRLYYGASNP----KGGGI----ENGTQFYTLATCHHSPEIYPG 131
                 C  A+  A+++R++   ++P     G GI    + G + +T      S ++ PG
Sbjct: 79  FGRTPPCVDALITAKVKRVFVAMTDPNPVVSGSGITRLRQAGVEVHTDILAAQSEKLNPG 138

Query: 132 ISEQRSRQIIQDFFKER 148
              QR R I + F + +
Sbjct: 139 FC-QRMR-IGKPFIRSK 153


>gi|82751356|ref|YP_417097.1| riboflavin specific deaminase [Staphylococcus aureus RF122]
 gi|82656887|emb|CAI81317.1| riboflavin specific deaminase [Staphylococcus aureus RF122]
          Length = 347

 Score = 40.4 bits (93), Expect = 0.083,   Method: Compositional matrix adjust.
 Identities = 39/151 (25%), Positives = 66/151 (43%), Gaps = 26/151 (17%)

Query: 7   FMSCALEEAQNAALRNEI--PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           FM  A++ A     +  +  PVGAV V   +I+    +    L+    HAE+ A+ M   
Sbjct: 4   FMDYAIQLANMVQGQTGVNPPVGAVVVKEGRIVGIGAH----LRKGDKHAEVQALDM--- 56

Query: 65  ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
             +Q+      +Y+TLEPC+       C   I   +I ++ Y          +N    + 
Sbjct: 57  --AQQNAEGATIYITLEPCSHFGSTPPCVNKIIDCKIAKVVYATK-------DNSLDTHG 107

Query: 119 LATC-HHSPEIYPGISEQRSRQIIQDFFKER 148
             T   H  E+   + ++R+ Q+ QDFFK +
Sbjct: 108 DDTLRDHGIEV-ECVDDERASQLYQDFFKAK 137


>gi|16079385|ref|NP_390209.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino) uracil
           reductase [Bacillus subtilis subsp. subtilis str. 168]
 gi|221310245|ref|ZP_03592092.1| riboflavin-specific deaminase [Bacillus subtilis subsp. subtilis
           str. 168]
 gi|221314569|ref|ZP_03596374.1| riboflavin-specific deaminase [Bacillus subtilis subsp. subtilis
           str. NCIB 3610]
 gi|221319491|ref|ZP_03600785.1| riboflavin-specific deaminase [Bacillus subtilis subsp. subtilis
           str. JH642]
 gi|221323767|ref|ZP_03605061.1| riboflavin-specific deaminase [Bacillus subtilis subsp. subtilis
           str. SMY]
 gi|132565|sp|P17618|RIBD_BACSU RecName: Full=Riboflavin biosynthesis protein RibD; Includes:
           RecName:
           Full=Diaminohydroxyphosphoribosylaminopyrimidine
           deaminase; Short=DRAP deaminase; AltName:
           Full=Riboflavin-specific deaminase; Includes: RecName:
           Full=5-amino-6-(5-phosphoribosylamino)uracil reductase;
           AltName: Full=HTP reductase
 gi|40085|emb|CAA35878.1| unnamed protein product [Bacillus subtilis]
 gi|410125|gb|AAA67481.1| ribG [Bacillus subtilis subsp. subtilis str. 168]
 gi|2634763|emb|CAB14260.1| fused diaminohydroxyphosphoribosylaminopyrimidine deaminase;
           5-amino-6-(5-phosphoribosylamino) uracil reductase
           [Bacillus subtilis subsp. subtilis str. 168]
 gi|34873545|gb|AAQ83285.1| RibG [Cloning vector pRFN4]
          Length = 361

 Score = 40.4 bits (93), Expect = 0.083,   Method: Compositional matrix adjust.
 Identities = 34/107 (31%), Positives = 50/107 (46%), Gaps = 17/107 (15%)

Query: 7   FMSCALEEAQNAALRNEIP--VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           +M  AL+ A+    + E    VGAV V + +I+    +    LK   AHAE+ AI M   
Sbjct: 5   YMKLALDLAKQGEGQTESNPLVGAVVVKDGQIVGMGAH----LKYGEAHAEVHAIHMAGA 60

Query: 65  ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP 105
                     D+YVTLEPC+       CA  I  + I+R++    +P
Sbjct: 61  HAEG-----ADIYVTLEPCSHYGKTPPCAELIINSGIKRVFVAMRDP 102


>gi|291484757|dbj|BAI85832.1| riboflavin-specific deaminase [Bacillus subtilis subsp. natto
           BEST195]
          Length = 361

 Score = 40.4 bits (93), Expect = 0.085,   Method: Compositional matrix adjust.
 Identities = 34/107 (31%), Positives = 50/107 (46%), Gaps = 17/107 (15%)

Query: 7   FMSCALEEAQNAALRNEIP--VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           +M  AL+ A+    + E    VGAV V + +I+    +    LK   AHAE+ AI M   
Sbjct: 5   YMKLALDLAKQGEGQTESNPLVGAVVVKDGQIVGMGAH----LKYGEAHAEVHAIHMAGA 60

Query: 65  ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP 105
                     D+YVTLEPC+       CA  I  + I+R++    +P
Sbjct: 61  HAEG-----ADIYVTLEPCSHYGKTPPCAELIINSGIKRVFVAMRDP 102


>gi|326315894|ref|YP_004233566.1| CMP/dCMP deaminase zinc-binding protein [Acidovorax avenae subsp.
           avenae ATCC 19860]
 gi|323372730|gb|ADX44999.1| CMP/dCMP deaminase zinc-binding protein [Acidovorax avenae subsp.
           avenae ATCC 19860]
          Length = 177

 Score = 40.4 bits (93), Expect = 0.086,   Method: Compositional matrix adjust.
 Identities = 28/80 (35%), Positives = 35/80 (43%), Gaps = 7/80 (8%)

Query: 25  PVGA--VAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEP 82
           P GA  VA   + +++  GN      D   HAE    R        ++L    L  T EP
Sbjct: 46  PFGALLVAPDGDTVLAEQGN-----IDTVNHAESTLAREAAARWPADLLRGCTLVTTFEP 100

Query: 83  CTMCAAAISLARIRRLYYGA 102
           C MCA  I  A I R+ YGA
Sbjct: 101 CAMCAGTIYWAGIGRVLYGA 120


>gi|229128665|ref|ZP_04257643.1| Riboflavin biosynthesis protein [Bacillus cereus BDRD-Cer4]
 gi|228654858|gb|EEL10718.1| Riboflavin biosynthesis protein [Bacillus cereus BDRD-Cer4]
          Length = 348

 Score = 40.4 bits (93), Expect = 0.086,   Method: Compositional matrix adjust.
 Identities = 38/127 (29%), Positives = 60/127 (47%), Gaps = 19/127 (14%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85
           VG+V V +N+I+    +    +K    HAEI AIRM     + E +    +YVTLEPC+ 
Sbjct: 11  VGSVIVNDNRIVGVGAH----MKAGEPHAEIHAIRM-----AGEQVRGATIYVTLEPCSH 61

Query: 86  ------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139
                 CA AI  A I+++     +P       G +    A      E+  G+ E+ S++
Sbjct: 62  HGRTGPCAEAIVQAGIKKVVVATLDPNPLVSGRGIKILQDAGI----EVLVGVCEEESKK 117

Query: 140 IIQDFFK 146
           + + F K
Sbjct: 118 MNEVFNK 124


>gi|56566242|gb|AAV98449.1| FCY1 [Cryptococcus neoformans var. grubii]
          Length = 225

 Score = 40.4 bits (93), Expect = 0.086,   Method: Compositional matrix adjust.
 Identities = 25/60 (41%), Positives = 30/60 (50%), Gaps = 9/60 (15%)

Query: 53  HAEILAIRMGCRIL------SQEILP---EVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
           H EI AI     +L      SQEIL    +  LY   EPC MCA+AI  A  + + YG S
Sbjct: 89  HGEISAITHCTEVLTAQGWTSQEILAGWKDFSLYTNGEPCPMCASAIRWAGFKEVIYGTS 148


>gi|85000845|ref|XP_955141.1| deaminase [Theileria annulata strain Ankara]
 gi|65303287|emb|CAI75665.1| deaminase, putative [Theileria annulata]
          Length = 297

 Score = 40.4 bits (93), Expect = 0.086,   Method: Compositional matrix adjust.
 Identities = 30/119 (25%), Positives = 56/119 (47%), Gaps = 16/119 (13%)

Query: 29  VAVLNNKIISRAGNRNRELKDVTAHAEILAI------RMGCRILSQEILPEV-----DLY 77
           +    +K+IS A ++ R++ ++  HA ILA+      +        +  P+      D+Y
Sbjct: 181 IITFKDKVISTAFDK-RDV-NILKHASILAVGKIAEAKKKRETQKMKDFPDYLCTGCDVY 238

Query: 78  VTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH---SPEIYPGIS 133
           ++ EPC MC  A+  +RI ++ YG  N K G   +    + +   +H   +  + P IS
Sbjct: 239 LSHEPCCMCGMALLHSRISKVIYGIKNQKLGCFGSVWNLHNMIELNHHFRAFTVTPNIS 297


>gi|15605717|ref|NP_213094.1| riboflavin specific deaminase [Aquifex aeolicus VF5]
 gi|6225948|sp|O66534|RIBD_AQUAE RecName: Full=Riboflavin biosynthesis protein RibD; Includes:
           RecName:
           Full=Diaminohydroxyphosphoribosylaminopyrimidine
           deaminase; Short=DRAP deaminase; AltName:
           Full=Riboflavin-specific deaminase; Includes: RecName:
           Full=5-amino-6-(5-phosphoribosylamino)uracil reductase;
           AltName: Full=HTP reductase
 gi|2982867|gb|AAC06487.1| riboflavin specific deaminase [Aquifex aeolicus VF5]
          Length = 356

 Score = 40.4 bits (93), Expect = 0.086,   Method: Compositional matrix adjust.
 Identities = 38/130 (29%), Positives = 57/130 (43%), Gaps = 27/130 (20%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85
           VGAV V   KI+    +     K    HAE++A+       + E      LYVTLEPCT 
Sbjct: 30  VGAVVVKEGKIVGLGYHE----KAGKPHAEVMALGQ-----AGEKAKGATLYVTLEPCTH 80

Query: 86  ------CAAAISLARIRRLYYGASNP----KGGGIENGTQFYTLATCHHSPEIYPGISEQ 135
                 C  AI  + I+R+     +P     G G+E           +   E+  G+ E+
Sbjct: 81  FGRTPPCTDAIIRSGIKRVVVATLDPNPLMSGKGVEK--------LRNAGIEVDVGVCEE 132

Query: 136 RSRQIIQDFF 145
            +R++ +DFF
Sbjct: 133 EARELNEDFF 142


>gi|317053384|ref|YP_004119151.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase [Pantoea sp.
           At-9b]
 gi|316953123|gb|ADU72595.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase [Pantoea sp.
           At-9b]
          Length = 144

 Score = 40.4 bits (93), Expect = 0.087,   Method: Compositional matrix adjust.
 Identities = 37/115 (32%), Positives = 53/115 (46%), Gaps = 21/115 (18%)

Query: 1   MKKGNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           M K   FM  ALE ++ A    R   PVG V V N  ++S+   ++        HAEI A
Sbjct: 1   MSKELDFMLLALEYSRLALPECRPNPPVGCVIVHNGVVVSKGFTQSPG----HHHAEIDA 56

Query: 59  IRMGCRILSQEILP--EVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP 105
           I       S+   P  E D++VTLEPC+       CA  ++  + R +Y    +P
Sbjct: 57  I-------SRLTFPMGECDIFVTLEPCSYQGRTPSCARTLAEMKPRHIYIAIEDP 104


>gi|121595392|ref|YP_987288.1| CMP/dCMP deaminase [Acidovorax sp. JS42]
 gi|120607472|gb|ABM43212.1| CMP/dCMP deaminase, zinc-binding protein [Acidovorax sp. JS42]
          Length = 170

 Score = 40.4 bits (93), Expect = 0.088,   Method: Compositional matrix adjust.
 Identities = 33/105 (31%), Positives = 41/105 (39%), Gaps = 8/105 (7%)

Query: 15  AQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEV 74
           AQ A      P GAV V  ++        N    D   HAE    R+     + E L   
Sbjct: 29  AQRAVSLGHHPFGAVLVGPDQETVLLEQCN---IDTVNHAESTLARVAATNFTPEFLWGC 85

Query: 75  DLYVTLEPCTMCAAAISLARIRRLYYGASNPK-----GGGIENGT 114
            LY  +EPC MCA     A I R+ YG +  +     G   EN T
Sbjct: 86  TLYTAVEPCCMCAGTAYWANIGRVVYGMTEAQLLAETGSHAENPT 130


>gi|49484015|ref|YP_041239.1| bifunctional riboflavin biosynthesis protein [Staphylococcus aureus
           subsp. aureus MRSA252]
 gi|257425881|ref|ZP_05602305.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp.
           aureus 55/2053]
 gi|257428548|ref|ZP_05604946.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp.
           aureus 65-1322]
 gi|257431182|ref|ZP_05607559.1| bifunctional riboflavin biosynthesis protein [Staphylococcus aureus
           subsp. aureus 68-397]
 gi|257433863|ref|ZP_05610221.1| bifunctional riboflavin biosynthesis protein [Staphylococcus aureus
           subsp. aureus E1410]
 gi|257436780|ref|ZP_05612824.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp.
           aureus M876]
 gi|282904343|ref|ZP_06312231.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp.
           aureus C160]
 gi|282906168|ref|ZP_06314023.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp.
           aureus Btn1260]
 gi|282909085|ref|ZP_06316903.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp.
           aureus WW2703/97]
 gi|282911393|ref|ZP_06319195.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp.
           aureus WBG10049]
 gi|282914562|ref|ZP_06322348.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp.
           aureus M899]
 gi|282919530|ref|ZP_06327265.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp.
           aureus C427]
 gi|282924908|ref|ZP_06332574.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp.
           aureus C101]
 gi|283958523|ref|ZP_06375974.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp.
           aureus A017934/97]
 gi|293503640|ref|ZP_06667487.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp.
           aureus 58-424]
 gi|293510656|ref|ZP_06669361.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp.
           aureus M809]
 gi|293537197|ref|ZP_06671877.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp.
           aureus M1015]
 gi|295428344|ref|ZP_06820973.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp.
           aureus EMRSA16]
 gi|297590692|ref|ZP_06949330.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp.
           aureus MN8]
 gi|49242144|emb|CAG40844.1| bifunctional riboflavin biosynthesis protein [Staphylococcus aureus
           subsp. aureus MRSA252]
 gi|257271575|gb|EEV03721.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp.
           aureus 55/2053]
 gi|257275389|gb|EEV06876.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp.
           aureus 65-1322]
 gi|257278130|gb|EEV08778.1| bifunctional riboflavin biosynthesis protein [Staphylococcus aureus
           subsp. aureus 68-397]
 gi|257281956|gb|EEV12093.1| bifunctional riboflavin biosynthesis protein [Staphylococcus aureus
           subsp. aureus E1410]
 gi|257284131|gb|EEV14254.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp.
           aureus M876]
 gi|282313274|gb|EFB43670.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp.
           aureus C101]
 gi|282317340|gb|EFB47714.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp.
           aureus C427]
 gi|282321743|gb|EFB52068.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp.
           aureus M899]
 gi|282325088|gb|EFB55398.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp.
           aureus WBG10049]
 gi|282327349|gb|EFB57644.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp.
           aureus WW2703/97]
 gi|282331460|gb|EFB60974.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp.
           aureus Btn1260]
 gi|282595961|gb|EFC00925.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp.
           aureus C160]
 gi|283790672|gb|EFC29489.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp.
           aureus A017934/97]
 gi|290920042|gb|EFD97110.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp.
           aureus M1015]
 gi|291095306|gb|EFE25571.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp.
           aureus 58-424]
 gi|291466547|gb|EFF09068.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp.
           aureus M809]
 gi|295127744|gb|EFG57381.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp.
           aureus EMRSA16]
 gi|297575578|gb|EFH94294.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp.
           aureus MN8]
 gi|312437774|gb|ADQ76845.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp.
           aureus TCH60]
 gi|315195682|gb|EFU26069.1| bifunctional riboflavin biosynthesis protein [Staphylococcus aureus
           subsp. aureus CGS00]
          Length = 347

 Score = 40.4 bits (93), Expect = 0.088,   Method: Compositional matrix adjust.
 Identities = 39/151 (25%), Positives = 66/151 (43%), Gaps = 26/151 (17%)

Query: 7   FMSCALEEAQNAALRNEI--PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           FM  A++ A     +  +  PVGAV V   +I+    +    L+    HAE+ A+ M   
Sbjct: 4   FMDYAIQLANMVQGQTGVNPPVGAVVVKEGRIVGIGAH----LRKGDKHAEVQALDM--- 56

Query: 65  ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
             +Q+      +Y+TLEPC+       C   I   +I ++ Y          +N    + 
Sbjct: 57  --AQQNAEGATIYITLEPCSHFGSTPPCVNKIIDCKIAKVVYATK-------DNSLDTHG 107

Query: 119 LATC-HHSPEIYPGISEQRSRQIIQDFFKER 148
             T   H  E+   + ++R+ Q+ QDFFK +
Sbjct: 108 DETIRDHGIEV-ECVDDERASQLYQDFFKAK 137


>gi|21283440|ref|NP_646528.1| riboflavin specific deaminase [Staphylococcus aureus subsp. aureus
           MW2]
 gi|49486593|ref|YP_043814.1| bifunctional riboflavin biosynthesis protein [Staphylococcus aureus
           subsp. aureus MSSA476]
 gi|297207517|ref|ZP_06923953.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp.
           aureus ATCC 51811]
 gi|300911601|ref|ZP_07129045.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp.
           aureus TCH70]
 gi|21204881|dbj|BAB95576.1| riboflavin specific deaminase [Staphylococcus aureus subsp. aureus
           MW2]
 gi|49245036|emb|CAG43497.1| bifunctional riboflavin biosynthesis protein [Staphylococcus aureus
           subsp. aureus MSSA476]
 gi|296887853|gb|EFH26750.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp.
           aureus ATCC 51811]
 gi|300887022|gb|EFK82223.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp.
           aureus TCH70]
          Length = 347

 Score = 40.4 bits (93), Expect = 0.088,   Method: Compositional matrix adjust.
 Identities = 39/151 (25%), Positives = 66/151 (43%), Gaps = 26/151 (17%)

Query: 7   FMSCALEEAQNAALRNEI--PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           FM  A++ A     +  +  PVGAV V   +I+    +    L+    HAE+ A+ M   
Sbjct: 4   FMDYAIQLANMVQGQTGVNPPVGAVVVKEGRIVGIGAH----LRKGDKHAEVQALDM--- 56

Query: 65  ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
             +Q+      +Y+TLEPC+       C   I   +I ++ Y          +N    + 
Sbjct: 57  --AQQNAEGATIYITLEPCSHFGSTPPCVNKIIDCKITKVVYATK-------DNSLDTHG 107

Query: 119 LATCH-HSPEIYPGISEQRSRQIIQDFFKER 148
             T   H  E+   + ++R+ Q+ QDFFK +
Sbjct: 108 DETLRAHGIEV-ECVDDERASQLYQDFFKAK 137


>gi|146308130|ref|YP_001188595.1| CMP/dCMP deaminase, zinc-binding [Pseudomonas mendocina ymp]
 gi|145576331|gb|ABP85863.1| CMP/dCMP deaminase, zinc-binding protein [Pseudomonas mendocina
           ymp]
          Length = 186

 Score = 40.4 bits (93), Expect = 0.089,   Method: Compositional matrix adjust.
 Identities = 21/42 (50%), Positives = 27/42 (64%), Gaps = 5/42 (11%)

Query: 72  PEVD-----LYVTLEPCTMCAAAISLARIRRLYYGASNPKGG 108
           P++D     LYV+LEPC MC + I LA IRR+ Y A +  GG
Sbjct: 84  PQLDRSGLTLYVSLEPCLMCHSRILLAGIRRVRYLARDRDGG 125


>gi|283471035|emb|CAQ50246.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp.
           aureus ST398]
          Length = 347

 Score = 40.4 bits (93), Expect = 0.091,   Method: Compositional matrix adjust.
 Identities = 39/151 (25%), Positives = 66/151 (43%), Gaps = 26/151 (17%)

Query: 7   FMSCALEEAQNAALRNEI--PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           FM  A++ A     +  +  PVGAV V   +I+    +    L+    HAE+ A+ M   
Sbjct: 4   FMDYAIQLANMVQGQTGVNPPVGAVVVKEGRIVGIGAH----LRKGDKHAEVQALDM--- 56

Query: 65  ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
             +Q+      +Y+TLEPC+       C   I   +I ++ Y          +N    + 
Sbjct: 57  --AQQNAEGATIYITLEPCSHFGSTPPCVNKIIDCKIAKVVYATK-------DNSLDTHG 107

Query: 119 LATC-HHSPEIYPGISEQRSRQIIQDFFKER 148
             T   H  E+   + ++R+ Q+ QDFFK +
Sbjct: 108 DETLRDHGIEV-ECVDDERASQLYQDFFKAK 137


>gi|325953844|ref|YP_004237504.1| riboflavin biosynthesis protein RibD [Weeksella virosa DSM 16922]
 gi|323436462|gb|ADX66926.1| riboflavin biosynthesis protein RibD [Weeksella virosa DSM 16922]
          Length = 345

 Score = 40.4 bits (93), Expect = 0.091,   Method: Compositional matrix adjust.
 Identities = 46/148 (31%), Positives = 65/148 (43%), Gaps = 21/148 (14%)

Query: 7   FMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
           +M+  L+ A N  L N  P   VG+V V N  II               HAE+ AI    
Sbjct: 10  YMNRCLQLAANG-LGNTYPNPFVGSVIVHNQNIIGEGFTSFYG----GPHAEVNAIH--- 61

Query: 64  RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFY 117
            +  +E+LP   LYVTLEPC        C+  I   +I R+  G  +P    + NG    
Sbjct: 62  SVEKKELLPSSTLYVTLEPCAHFGKTPPCSDLIIEHKIPRVVVGCLDP--FALVNGEGIN 119

Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDFF 145
            + T  H  E+  GI E+   ++ + FF
Sbjct: 120 RMRT--HGIEVSVGILEKECLELNRRFF 145


>gi|77918274|ref|YP_356089.1| cytosine/adenosine deaminase [Pelobacter carbinolicus DSM 2380]
 gi|77544357|gb|ABA87919.1| cytosine/adenosine deaminase [Pelobacter carbinolicus DSM 2380]
          Length = 193

 Score = 40.4 bits (93), Expect = 0.091,   Method: Compositional matrix adjust.
 Identities = 25/100 (25%), Positives = 50/100 (50%), Gaps = 16/100 (16%)

Query: 51  TAHAEILAIRMGCRILSQEILPEV----DLYVTLEPCTMCAAAISLARIRRLYYGA--SN 104
            AHAE++A+ +  + +    L +     +L  + EPC MC  A+  A +++L  GA  ++
Sbjct: 78  VAHAELVALMLAQKYVGSFSLADAGRNAELTSSTEPCAMCLGALPWAGLKQLACGARETD 137

Query: 105 PKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
            +  G + G +          P  +PG+ E+R  ++++D 
Sbjct: 138 ARAVGFDEGDK----------PPQWPGLLEKRGIRVLRDI 167


>gi|282933540|ref|ZP_06338910.1| riboflavin biosynthesis protein RibD [Lactobacillus jensenii 208-1]
 gi|297205330|ref|ZP_06922726.1| riboflavin biosynthesis protein RibD [Lactobacillus jensenii
           JV-V16]
 gi|281302283|gb|EFA94515.1| riboflavin biosynthesis protein RibD [Lactobacillus jensenii 208-1]
 gi|297149908|gb|EFH30205.1| riboflavin biosynthesis protein RibD [Lactobacillus jensenii
           JV-V16]
          Length = 351

 Score = 40.4 bits (93), Expect = 0.092,   Method: Compositional matrix adjust.
 Identities = 44/159 (27%), Positives = 70/159 (44%), Gaps = 22/159 (13%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP--VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           M K   FM+ A+  A            VGAV V + K++  A   + +  DV  HAE   
Sbjct: 1   MNKDEQFMALAINSASKGRYHTWTNPMVGAVVVKDGKVL--ATGYHHKYGDV--HAE--- 53

Query: 59  IRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIEN 112
            R     L+ E L    LYVTLEPC        C+  I  ++I+R+     +P   G+  
Sbjct: 54  -RDAISKLTPEQLFNSTLYVTLEPCNHTGKQPPCSDLIIASKIKRVVISEIDPH--GLVT 110

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQ--DFFKERR 149
           G     L +  H+  +  G+  Q ++++ +  +FF E +
Sbjct: 111 GKGIKKLRS--HNISVTTGVLTQEAKKLNKHYNFFYEHK 147


>gi|110598673|ref|ZP_01386938.1| CMP/dCMP deaminase, zinc-binding [Chlorobium ferrooxidans DSM
           13031]
 gi|110339726|gb|EAT58236.1| CMP/dCMP deaminase, zinc-binding [Chlorobium ferrooxidans DSM
           13031]
          Length = 192

 Score = 40.4 bits (93), Expect = 0.092,   Method: Compositional matrix adjust.
 Identities = 28/104 (26%), Positives = 49/104 (47%), Gaps = 9/104 (8%)

Query: 52  AHAEILAIRMGCRILSQEIL-----PEVDLYVTLEPCTMCAAAISLARIRRLYYGAS--N 104
           AHAE++AI +  + ++   L     P+ +L  + EPC MC  AI  + I RL  GAS  +
Sbjct: 79  AHAEMVAIAIAQKKINSWTLNHAKSPQHELVTSCEPCAMCFGAIIWSGISRLVCGASTAD 138

Query: 105 PKGGGIENG--TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
               G + G   + +         E+  GI    ++ + +D+ +
Sbjct: 139 ATAAGFDEGPKPEKWIEELEKRGIEVVTGICSNDAKMVFRDYLE 182


>gi|312213591|emb|CBX93593.1| similar to tRNA-specific adenosine-34 deaminase subunit Tad3
           [Leptosphaeria maculans]
          Length = 430

 Score = 40.4 bits (93), Expect = 0.093,   Method: Compositional matrix adjust.
 Identities = 16/40 (40%), Positives = 25/40 (62%)

Query: 73  EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN 112
           ++D+Y+T EPC MC+ AI  +R RR  +    P  GG+ +
Sbjct: 339 DLDIYLTNEPCVMCSMAILHSRFRRCVFSKRMPHTGGMTS 378


>gi|194367233|ref|YP_002029843.1| CMP/dCMP deaminase zinc-binding [Stenotrophomonas maltophilia
           R551-3]
 gi|194350037|gb|ACF53160.1| CMP/dCMP deaminase zinc-binding [Stenotrophomonas maltophilia
           R551-3]
          Length = 150

 Score = 40.4 bits (93), Expect = 0.093,   Method: Compositional matrix adjust.
 Identities = 31/120 (25%), Positives = 49/120 (40%), Gaps = 8/120 (6%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNN-KIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
            +  A+ EA+       +P+GA    N+ +++    NR  +  D + H E  A R   R 
Sbjct: 10  LLQTAIAEARQGLAEGGVPIGAALYHNDGRLLGCGHNRRVQESDPSVHGETDAFRKAGR- 68

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI----ENGTQFYTLAT 121
             Q    +  +  TL PC  C+  +    I  +  G S    GGI    ENG +   L +
Sbjct: 69  --QRRYQDTIMVTTLAPCWYCSGLVRQFNIGTVVVGESRTFQGGIDWLRENGVKVIDLDS 126


>gi|282917028|ref|ZP_06324786.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp.
           aureus D139]
 gi|283770846|ref|ZP_06343738.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp.
           aureus H19]
 gi|282319515|gb|EFB49867.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp.
           aureus D139]
 gi|283460993|gb|EFC08083.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp.
           aureus H19]
          Length = 347

 Score = 40.0 bits (92), Expect = 0.094,   Method: Compositional matrix adjust.
 Identities = 39/151 (25%), Positives = 66/151 (43%), Gaps = 26/151 (17%)

Query: 7   FMSCALEEAQNAALRNEI--PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           FM  A++ A     +  +  PVGAV V   +I+    +    L+    HAE+ A+ M   
Sbjct: 4   FMDYAIQLANMVQGQTGVNPPVGAVVVKEGRIVGIGAH----LRKGDKHAEVQALDM--- 56

Query: 65  ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
             +Q+      +Y+TLEPC+       C   I   +I ++ Y          +N    + 
Sbjct: 57  --AQQNAEGATIYITLEPCSHFGSTPPCVNKIIDCKIAKVVYATK-------DNSLDTHG 107

Query: 119 LATC-HHSPEIYPGISEQRSRQIIQDFFKER 148
             T   H  E+   + ++R+ Q+ QDFFK +
Sbjct: 108 DETLRDHGIEV-ECVDDERASQLYQDFFKAK 137


>gi|256851712|ref|ZP_05557100.1| riboflavin biosynthesis protein RibD [Lactobacillus jensenii
           27-2-CHN]
 gi|260661570|ref|ZP_05862482.1| riboflavin biosynthesis protein RibD [Lactobacillus jensenii
           115-3-CHN]
 gi|256615670|gb|EEU20859.1| riboflavin biosynthesis protein RibD [Lactobacillus jensenii
           27-2-CHN]
 gi|260547627|gb|EEX23605.1| riboflavin biosynthesis protein RibD [Lactobacillus jensenii
           115-3-CHN]
          Length = 352

 Score = 40.0 bits (92), Expect = 0.095,   Method: Compositional matrix adjust.
 Identities = 44/159 (27%), Positives = 70/159 (44%), Gaps = 22/159 (13%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP--VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           M K   FM+ A+  A            VGAV V + K++  A   + +  DV  HAE   
Sbjct: 2   MNKDEQFMALAINSASKGRYHTWTNPMVGAVVVKDGKVL--ATGYHHKYGDV--HAE--- 54

Query: 59  IRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIEN 112
            R     L+ E L    LYVTLEPC        C+  I  ++I+R+     +P   G+  
Sbjct: 55  -RDAISKLTPEQLFNSTLYVTLEPCNHTGKQPPCSDLIIASKIKRVVISEIDPH--GLVT 111

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQ--DFFKERR 149
           G     L +  H+  +  G+  Q ++++ +  +FF E +
Sbjct: 112 GKGIKKLRS--HNISVTTGVLTQEAKKLNKHYNFFYEHK 148


>gi|303272905|ref|XP_003055814.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226463788|gb|EEH61066.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 354

 Score = 40.0 bits (92), Expect = 0.095,   Method: Compositional matrix adjust.
 Identities = 20/58 (34%), Positives = 33/58 (56%), Gaps = 5/58 (8%)

Query: 75  DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA---TCHHSPEIY 129
           D+Y   EPC MCA A++ +R+RR+ Y   + + G +  G   Y+L    T +H  ++Y
Sbjct: 293 DVYCAREPCVMCAMALTHSRVRRVIYAIPSARHGALGGGA--YSLQKERTLNHHYDVY 348


>gi|51245792|ref|YP_065676.1| hypothetical protein DP1940 [Desulfotalea psychrophila LSv54]
 gi|50876829|emb|CAG36669.1| hypothetical protein DP1940 [Desulfotalea psychrophila LSv54]
          Length = 164

 Score = 40.0 bits (92), Expect = 0.096,   Method: Compositional matrix adjust.
 Identities = 24/79 (30%), Positives = 37/79 (46%), Gaps = 5/79 (6%)

Query: 33  NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEIL-----PEVDLYVTLEPCTMCA 87
           + +++    NR   L   +AHAE++AI +  + L    L     PE +L V   PC MC 
Sbjct: 29  SGRLVMLGVNRVMPLNCSSAHAEVMAISLAQQKLENFDLGAPGMPEHELVVNWRPCIMCL 88

Query: 88  AAISLARIRRLYYGASNPK 106
            A+  +  R L    S P+
Sbjct: 89  GALMWSGARHLTIAGSGPE 107


>gi|320142810|gb|EFW34610.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp.
           aureus MRSA177]
          Length = 357

 Score = 40.0 bits (92), Expect = 0.098,   Method: Compositional matrix adjust.
 Identities = 39/151 (25%), Positives = 66/151 (43%), Gaps = 26/151 (17%)

Query: 7   FMSCALEEAQNAALRNEI--PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           FM  A++ A     +  +  PVGAV V   +I+    +    L+    HAE+ A+ M   
Sbjct: 14  FMDYAIQLANMVQGQTGVNPPVGAVVVKEGRIVGIGAH----LRKGDKHAEVQALDM--- 66

Query: 65  ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
             +Q+      +Y+TLEPC+       C   I   +I ++ Y          +N    + 
Sbjct: 67  --AQQNAEGATIYITLEPCSHFGSTPPCVNKIIDCKIAKVVYATK-------DNSLDTHG 117

Query: 119 LATCH-HSPEIYPGISEQRSRQIIQDFFKER 148
             T   H  E+   + ++R+ Q+ QDFFK +
Sbjct: 118 DETLRAHGIEV-ECVDDERASQLYQDFFKAK 147


>gi|313895132|ref|ZP_07828689.1| riboflavin biosynthesis protein RibD [Selenomonas sp. oral taxon
           137 str. F0430]
 gi|312976027|gb|EFR41485.1| riboflavin biosynthesis protein RibD [Selenomonas sp. oral taxon
           137 str. F0430]
          Length = 386

 Score = 40.0 bits (92), Expect = 0.099,   Method: Compositional matrix adjust.
 Identities = 42/118 (35%), Positives = 54/118 (45%), Gaps = 23/118 (19%)

Query: 7   FMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
           FM  AL  A+ A  R   P   VGAV V +  ++    +R         HAEI A+RM  
Sbjct: 28  FMWEALHLAEFARGRTS-PNPLVGAVIVRDGIVVGSGWHRAAG----EPHAEIHALRM-- 80

Query: 64  RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPK----GGGIE 111
              + E+     LYVTLEPC+       CA A+  A I R+    S+P     G GIE
Sbjct: 81  ---AGELARGATLYVTLEPCSHHGRTGPCAEAVIAAGIARVVTALSDPNPVVAGHGIE 135


>gi|302333432|gb|ADL23625.1| bifunctional pyrimidine reductase / riboflavin biosynthesis protein
           [Staphylococcus aureus subsp. aureus JKD6159]
          Length = 343

 Score = 40.0 bits (92), Expect = 0.099,   Method: Compositional matrix adjust.
 Identities = 37/136 (27%), Positives = 59/136 (43%), Gaps = 34/136 (25%)

Query: 25  PVGAVAVLNNKIIS-----RAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVT 79
           PVGAV V   +I+      R GN+         HAE+ A+ M     +Q+      +Y+T
Sbjct: 20  PVGAVVVKEGRIVGIGAHLRKGNK---------HAEVQALDM-----AQQNAEGATIYIT 65

Query: 80  LEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH-HSPEIYPGI 132
           LEPC+       C   I   +I ++ Y          +N    +   T   H  E+   +
Sbjct: 66  LEPCSHFGSTPPCVNKIIDCKIAKVVYATK-------DNSLDTHGDDTLRAHGIEV-ECV 117

Query: 133 SEQRSRQIIQDFFKER 148
            ++R+ Q+ QDFFK +
Sbjct: 118 DDERASQLYQDFFKAK 133


>gi|317128514|ref|YP_004094796.1| riboflavin biosynthesis protein RibD [Bacillus cellulosilyticus DSM
           2522]
 gi|315473462|gb|ADU30065.1| riboflavin biosynthesis protein RibD [Bacillus cellulosilyticus DSM
           2522]
          Length = 362

 Score = 40.0 bits (92), Expect = 0.099,   Method: Compositional matrix adjust.
 Identities = 36/110 (32%), Positives = 54/110 (49%), Gaps = 19/110 (17%)

Query: 5   NVFMSCALEEA---QNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           N +M  A+E A   +     N + VGAV V NN+I+    +    LK    HAE  AI M
Sbjct: 3   NKYMKMAIELAKVTEGHTTPNPV-VGAVIVNNNQIVGFGAH----LKAGEHHAEKHAIEM 57

Query: 62  GCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP 105
                +++      +YVTLEPC+       CA A+  A I+++  G+ +P
Sbjct: 58  -----AKDKTEGATIYVTLEPCSHYGRTPPCADAVIEAGIKKVIIGSVDP 102


>gi|229103925|ref|ZP_04234603.1| Riboflavin biosynthesis protein [Bacillus cereus Rock3-28]
 gi|228679493|gb|EEL33692.1| Riboflavin biosynthesis protein [Bacillus cereus Rock3-28]
          Length = 360

 Score = 40.0 bits (92), Expect = 0.099,   Method: Compositional matrix adjust.
 Identities = 46/148 (31%), Positives = 68/148 (45%), Gaps = 23/148 (15%)

Query: 8   MSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           M  ALE A NA      P   VG+V V +N+I+    +    +K    HAEI AIRM   
Sbjct: 1   MKLALENA-NAMKGQTTPNPLVGSVIVNDNRIVGIGAH----MKAGEPHAEIHAIRM--- 52

Query: 65  ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
             + E      +YVTLEPC+       CA AI  A I+++     +P    + +G     
Sbjct: 53  --AGEQARGGTIYVTLEPCSHHGRTGPCAEAIVQAGIKKVVVATLDPN--PLVSGRGIKV 108

Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFK 146
           L       E+  G+ E+ S+++ + F K
Sbjct: 109 LQDA--GIEVLVGVCEEESKKMNEVFNK 134


>gi|329947524|ref|ZP_08294716.1| guanine deaminase family protein [Actinomyces sp. oral taxon 170
          str. F0386]
 gi|328524214|gb|EGF51287.1| guanine deaminase family protein [Actinomyces sp. oral taxon 170
          str. F0386]
          Length = 160

 Score = 40.0 bits (92), Expect = 0.099,   Method: Compositional matrix adjust.
 Identities = 26/64 (40%), Positives = 32/64 (50%), Gaps = 1/64 (1%)

Query: 24 IPVGAVAVLNNKIISRAG-NRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEP 82
          +P   V V   + IS  G NR +E  D +AHAEI+AIR       +  L    L  T EP
Sbjct: 28 LPFVGVIVDGQQAISEFGVNRVQETGDPSAHAEIVAIRDALSSSGETDLRGTTLLATGEP 87

Query: 83 CTMC 86
          C MC
Sbjct: 88 CGMC 91


>gi|23097878|ref|NP_691344.1| riboflavin specific deaminase [Oceanobacillus iheyensis HTE831]
 gi|22776102|dbj|BAC12379.1| riboflavin specific deaminase
           (diaminohydroxyphosphoribosylaminopyrimidine deaminase :
           5-amino-6-(5-phosphoribosylamino) uracil reductase)
           [Oceanobacillus iheyensis HTE831]
          Length = 367

 Score = 40.0 bits (92), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 45/156 (28%), Positives = 69/156 (44%), Gaps = 25/156 (16%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP----VGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56
           M     +M  A+E A+  A++ +      VGAV V +N+I+    +    LK    HAEI
Sbjct: 1   MTDDKHYMKLAIENAK--AMKGQTDPNPLVGAVIVNHNRIVGVGSH----LKAGEPHAEI 54

Query: 57  LAIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGI 110
            A++M     + E      +YVTLEPC+       CA A+  A +RR+     +P     
Sbjct: 55  HALQM-----AGENAKGATIYVTLEPCSHQGRTGPCALALVEAGVRRVVIATLDPNPLVA 109

Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
            NG +    A      E+  G+ E  S  + + F K
Sbjct: 110 GNGVKILEDAGI----EVEVGVLEDESISMNEVFNK 141


>gi|258424182|ref|ZP_05687064.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus A9635]
 gi|257845803|gb|EEV69835.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus A9635]
          Length = 347

 Score = 40.0 bits (92), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 39/151 (25%), Positives = 66/151 (43%), Gaps = 26/151 (17%)

Query: 7   FMSCALEEAQNAALRNEI--PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           FM  A++ A     +  +  PVGAV V   +I+    +    L+    HAE+ A+ M   
Sbjct: 4   FMDYAIQLANMVQGQTGVNPPVGAVVVKEGRIVGIGAH----LRKGDKHAEVQALDM--- 56

Query: 65  ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
             +Q+      +Y+TLEPC+       C   I   +I ++ Y          +N    + 
Sbjct: 57  --AQQNAEGATIYITLEPCSHFGSTPPCVNKIIDCKIAKVVYATK-------DNSLNTHG 107

Query: 119 LATC-HHSPEIYPGISEQRSRQIIQDFFKER 148
             T   H  E+   + ++R+ Q+ QDFFK +
Sbjct: 108 DETLRDHGIEV-ECVDDERASQLYQDFFKAK 137


>gi|328873884|gb|EGG22250.1| hypothetical protein DFA_04368 [Dictyostelium fasciculatum]
          Length = 328

 Score = 40.0 bits (92), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 19/61 (31%), Positives = 28/61 (45%)

Query: 44  NRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
           N    ++ AH E +AI     +   +      LY T EPC MCA A+  A  + + +G  
Sbjct: 101 NTGSPNMIAHGETVAINNCTALYGIKSFTNFTLYTTGEPCAMCAGALVWADFKTIVWGTF 160

Query: 104 N 104
           N
Sbjct: 161 N 161


>gi|308272413|emb|CBX29018.1| hypothetical protein N47_P17230 [uncultured Desulfobacterium sp.]
          Length = 196

 Score = 40.0 bits (92), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 21/57 (36%), Positives = 31/57 (54%), Gaps = 5/57 (8%)

Query: 53  HAEILAI-----RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASN 104
           HAE+LA      ++    L    LP  +L  + EPC MC  AI+ + +RR+  GAS+
Sbjct: 82  HAEVLAFALAQKKVATYDLGGANLPSHELVSSTEPCAMCLGAIAWSGVRRVITGASD 138


>gi|320354782|ref|YP_004196121.1| CMP/dCMP deaminase zinc-binding protein [Desulfobulbus propionicus
           DSM 2032]
 gi|320123284|gb|ADW18830.1| CMP/dCMP deaminase zinc-binding protein [Desulfobulbus propionicus
           DSM 2032]
          Length = 197

 Score = 40.0 bits (92), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 26/79 (32%), Positives = 36/79 (45%), Gaps = 5/79 (6%)

Query: 33  NNKIISRAGNRNRELKDVTAHAEILAIRM-----GCRILSQEILPEVDLYVTLEPCTMCA 87
           + K+I    NR   L   +AHAEI A+ +     G   L    LP   L V   PC MC 
Sbjct: 62  SGKLIVIGVNRVIPLNCSSAHAEITALTLAQQMLGVYDLGGPGLPAHQLVVNWSPCAMCF 121

Query: 88  AAISLARIRRLYYGASNPK 106
            A+  + IR L    ++P+
Sbjct: 122 GAVLWSGIRSLVIAGADPE 140


>gi|57652067|ref|YP_186652.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp.
           aureus COL]
 gi|151221874|ref|YP_001332696.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp.
           aureus str. Newman]
 gi|161509986|ref|YP_001575645.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase
           [Staphylococcus aureus subsp. aureus USA300_TCH1516]
 gi|258450849|ref|ZP_05698907.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus A5948]
 gi|262050319|ref|ZP_06023164.1| riboflavin specific deaminase [Staphylococcus aureus D30]
 gi|262053078|ref|ZP_06025250.1| riboflavin specific deaminase [Staphylococcus aureus 930918-3]
 gi|284024817|ref|ZP_06379215.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase
           [Staphylococcus aureus subsp. aureus 132]
 gi|294849930|ref|ZP_06790669.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus A9754]
 gi|304380637|ref|ZP_07363309.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp.
           aureus ATCC BAA-39]
 gi|57286253|gb|AAW38347.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp.
           aureus COL]
 gi|150374674|dbj|BAF67934.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp.
           aureus str. Newman]
 gi|160368795|gb|ABX29766.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase
           [Staphylococcus aureus subsp. aureus USA300_TCH1516]
 gi|257861473|gb|EEV84276.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus A5948]
 gi|259159032|gb|EEW44104.1| riboflavin specific deaminase [Staphylococcus aureus 930918-3]
 gi|259161579|gb|EEW46176.1| riboflavin specific deaminase [Staphylococcus aureus D30]
 gi|269941247|emb|CBI49636.1| bifunctional riboflavin biosynthesis protein [Staphylococcus aureus
           subsp. aureus TW20]
 gi|294823269|gb|EFG39699.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus A9754]
 gi|304340832|gb|EFM06760.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp.
           aureus ATCC BAA-39]
 gi|315195936|gb|EFU26300.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase
           [Staphylococcus aureus subsp. aureus CGS01]
 gi|329314447|gb|AEB88860.1| Riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp.
           aureus T0131]
 gi|329727002|gb|EGG63459.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp.
           aureus 21189]
          Length = 347

 Score = 40.0 bits (92), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 39/151 (25%), Positives = 66/151 (43%), Gaps = 26/151 (17%)

Query: 7   FMSCALEEAQNAALRNEI--PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           FM  A++ A     +  +  PVGAV V   +I+    +    L+    HAE+ A+ M   
Sbjct: 4   FMDYAIQLANMVQGQTGVNPPVGAVVVKEGRIVGIGAH----LRKGDKHAEVQALDM--- 56

Query: 65  ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
             +Q+      +Y+TLEPC+       C   I   +I ++ Y          +N    + 
Sbjct: 57  --AQQNAEGATIYITLEPCSHFGSTPPCVNKIIDCKIAKVVYATK-------DNSLDTHG 107

Query: 119 LATCH-HSPEIYPGISEQRSRQIIQDFFKER 148
             T   H  E+   + ++R+ Q+ QDFFK +
Sbjct: 108 DETLRAHGIEV-ECVDDERASQLYQDFFKAK 137


>gi|282927316|ref|ZP_06334937.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus A9765]
 gi|282592080|gb|EFB97105.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus A9765]
          Length = 347

 Score = 40.0 bits (92), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 39/151 (25%), Positives = 66/151 (43%), Gaps = 26/151 (17%)

Query: 7   FMSCALEEAQNAALRNEI--PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           FM  A++ A     +  +  PVGAV V   +I+    +    L+    HAE+ A+ M   
Sbjct: 4   FMDYAIQLANMVQGQTGVNPPVGAVVVKEGRIVGIGAH----LRKGDKHAEVQALDM--- 56

Query: 65  ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
             +Q+      +Y+TLEPC+       C   I   +I ++ Y          +N    + 
Sbjct: 57  --AQQNAEGATIYITLEPCSHFGSTPPCVNKIIDCKIAKVVYATK-------DNSLDTHG 107

Query: 119 LATCH-HSPEIYPGISEQRSRQIIQDFFKER 148
             T   H  E+   + ++R+ Q+ QDFFK +
Sbjct: 108 DETLRAHGIEV-ECVDDERASQLYQDFFKAK 137


>gi|219849511|ref|YP_002463944.1| riboflavin biosynthesis protein RibD [Chloroflexus aggregans DSM
           9485]
 gi|219543770|gb|ACL25508.1| riboflavin biosynthesis protein RibD [Chloroflexus aggregans DSM
           9485]
          Length = 409

 Score = 40.0 bits (92), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 45/150 (30%), Positives = 67/150 (44%), Gaps = 23/150 (15%)

Query: 7   FMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
           +M  AL  AQ AA R   P   VGAV V + +I+    +R    +    HAE+ A+R   
Sbjct: 10  YMRRALVLAQQAAGRTS-PNPMVGAVIVKDGRIVGEGYHR----RAGEPHAEVEALR--- 61

Query: 64  RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFY 117
             ++ E      +YVTLEPC        C  AI  A I  +YY  ++P    + +G    
Sbjct: 62  --VAGEAARGATMYVTLEPCAHVGRTPPCTDAIIAAGITEVYYAIADPN--PLVSGKGHA 117

Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
            LA       +  G+ E  + ++ + FFK 
Sbjct: 118 QLAAA--GIRVQCGVCEAEAFELNRPFFKH 145


>gi|319785885|ref|YP_004145360.1| cytosine deaminase [Pseudoxanthomonas suwonensis 11-1]
 gi|317464397|gb|ADV26129.1| Cytosine deaminase [Pseudoxanthomonas suwonensis 11-1]
          Length = 158

 Score = 40.0 bits (92), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 29/104 (27%), Positives = 46/104 (44%), Gaps = 5/104 (4%)

Query: 7   FMSCALEEAQNAALRNEIPVG-AVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
            ++ A+EEA+       IP+G A+   +  ++ R  NR  +  D + H E  A R   R 
Sbjct: 10  MLAIAVEEARQGLAEGGIPIGAALFAADGTLLGRGHNRRVQENDPSVHGETDAFRKAGR- 68

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG-ASNPKGG 108
             Q    +  +  TL PC  C+  +    I  +  G A N +GG
Sbjct: 69  --QRSYRDTIMVTTLSPCWYCSGLVRQFGIGTVVMGEAVNFQGG 110


>gi|299147398|ref|ZP_07040463.1| riboflavin biosynthesis protein RibD [Bacteroides sp. 3_1_23]
 gi|298514676|gb|EFI38560.1| riboflavin biosynthesis protein RibD [Bacteroides sp. 3_1_23]
          Length = 351

 Score = 40.0 bits (92), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 45/148 (30%), Positives = 67/148 (45%), Gaps = 21/148 (14%)

Query: 7   FMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
           +M   +E A+N  L N  P   VGAV V N +II    +    ++   AHAE+ AIR   
Sbjct: 12  YMRRCIELAKNG-LCNVPPNPTVGAVIVCNGRIIGEGYH----IRCGEAHAEVNAIR--- 63

Query: 64  RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFY 117
            +  + +L    +YV+LEPC+       CA  I   +I R+  G  +P       G Q  
Sbjct: 64  SVKDESLLKHSTIYVSLEPCSHYGKTPPCADLIIEKQIPRIVIGCQDPFSEVTGRGIQKL 123

Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDFF 145
             A      E+  GI E+  + +I+ F 
Sbjct: 124 RDA----GREVTVGILEKECQSLIRRFI 147


>gi|254468535|ref|ZP_05081941.1| riboflavin biosynthesis protein RibD [beta proteobacterium KB13]
 gi|207087345|gb|EDZ64628.1| riboflavin biosynthesis protein RibD [beta proteobacterium KB13]
          Length = 363

 Score = 40.0 bits (92), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 39/129 (30%), Positives = 61/129 (47%), Gaps = 21/129 (16%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85
           VGAV V+++KII  A   ++E      HAE++AI   C+   + +L +  L+VTLEPC  
Sbjct: 31  VGAVIVVDDKII--ATGYHQEFG--GPHAEVVAIH-NCK--DKALLKKSTLFVTLEPCAH 83

Query: 86  ------CAAAISLARIRRLYYGAS--NPKGGGIENGTQFYTLATCHHSPEIYPGISEQRS 137
                 C   I    I+R+   +   NPK  GI         +      E+  G+ E ++
Sbjct: 84  EGKTPPCLDLILKHDIKRVVIASQDPNPKVNGIS------IKSLIEKGVEVDVGLMEDQA 137

Query: 138 RQIIQDFFK 146
             + + FFK
Sbjct: 138 FNLNKGFFK 146


>gi|239637909|ref|ZP_04678870.1| riboflavin biosynthesis protein RibD [Staphylococcus warneri
           L37603]
 gi|239596472|gb|EEQ79008.1| riboflavin biosynthesis protein RibD [Staphylococcus warneri
           L37603]
          Length = 347

 Score = 40.0 bits (92), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 42/161 (26%), Positives = 65/161 (40%), Gaps = 44/161 (27%)

Query: 7   FMSCALEEAQNAALRNEI--PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           FM+ A++ AQ    +  +  PVG+V V + +I+    +    L+    HAE+ A+ M   
Sbjct: 4   FMNYAIQLAQMVDGQTGVNPPVGSVVVKDGRIVGIGAH----LRKGDKHAEVQALDM--- 56

Query: 65  ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP----------KGG 108
             +Q       +YV+LEPCT       C   I  A I ++ Y   +           K  
Sbjct: 57  --AQSEANGATIYVSLEPCTHHGSTPPCVDKIIEAGIHKVIYAVKDTTLISKGDDILKNA 114

Query: 109 GIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
           GIE   Q+  +A                  Q+ QDFF  +R
Sbjct: 115 GIEVEFQYNAVAA-----------------QLYQDFFTAKR 138


>gi|229080603|ref|ZP_04213123.1| Riboflavin biosynthesis protein [Bacillus cereus Rock4-2]
 gi|228702704|gb|EEL55170.1| Riboflavin biosynthesis protein [Bacillus cereus Rock4-2]
          Length = 360

 Score = 40.0 bits (92), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 44/149 (29%), Positives = 69/149 (46%), Gaps = 25/149 (16%)

Query: 8   MSCALEEAQNAALRNEIP----VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
           M  ALE A+  A++ +      VG+V V +N+I+    +    +K    HAEI AIRM  
Sbjct: 1   MKLALENAK--AMKGQTTPNPLVGSVIVNDNRIVGVGAH----MKAGEPHAEIHAIRM-- 52

Query: 64  RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFY 117
              + E      +YVTLEPC+       CA AI  A I+++     +P       G +  
Sbjct: 53  ---AGEQARGGTIYVTLEPCSHHGRTGPCAEAIVQAGIKKVVVATLDPNPLVSGRGIKIL 109

Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDFFK 146
             A      E+  G+ E+ S+++ + F K
Sbjct: 110 QDAGI----EVLVGVCEEESKKMNEVFNK 134


>gi|323702710|ref|ZP_08114371.1| riboflavin biosynthesis protein RibD [Desulfotomaculum nigrificans
           DSM 574]
 gi|323532373|gb|EGB22251.1| riboflavin biosynthesis protein RibD [Desulfotomaculum nigrificans
           DSM 574]
          Length = 375

 Score = 40.0 bits (92), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 44/155 (28%), Positives = 67/155 (43%), Gaps = 23/155 (14%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57
           M +   FM  ALE A+ A  R   P   VGAV V + +++     +    K  TAHAE++
Sbjct: 1   MDQDKHFMQMALELARKARGRTS-PNPMVGAVVVKDGQVV----GQGWHAKAGTAHAEVV 55

Query: 58  AIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIE 111
           A+       + E      +YVTLEPC        C  A+  A ++R+    ++P      
Sbjct: 56  ALAD-----AGEQARGATVYVTLEPCCHHGRTGPCTEALLKAGVKRVVAAMTDPNPLVAG 110

Query: 112 NGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
            G      A      E+  G+ E  +RQ+ + F K
Sbjct: 111 KGLAILRDAGV----EVQVGVLESEARQLNEIFIK 141


>gi|300813870|ref|ZP_07094175.1| riboflavin biosynthesis protein RibD [Peptoniphilus sp. oral taxon
           836 str. F0141]
 gi|300512057|gb|EFK39252.1| riboflavin biosynthesis protein RibD [Peptoniphilus sp. oral taxon
           836 str. F0141]
          Length = 372

 Score = 40.0 bits (92), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 71/152 (46%), Gaps = 28/152 (18%)

Query: 7   FMSCALEEAQNA---ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
           +MS A+E A+      L N + VG V V +++II R    +++  D+  HAE +AI    
Sbjct: 10  YMSLAMELAEKGKGFTLTNPM-VGCVIVNDDRIIGRG--YHKKFGDL--HAETMAIEDAK 64

Query: 64  RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP----KGGGIENG 113
           +  + E L    LYV LEPC        C  AI   +I+++     +P     G GI+  
Sbjct: 65  K--NGESLEGSTLYVNLEPCCHYGKQPPCTKAIIENKIKKVVIANVDPNKKVSGKGIK-- 120

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
               TL       E+  GI E+   ++ ++FF
Sbjct: 121 ----TLEDA--GIEVVEGIMEEEGLKLNEEFF 146


>gi|228959585|ref|ZP_04121266.1| Riboflavin biosynthesis protein [Bacillus thuringiensis serovar
           pakistani str. T13001]
 gi|228800077|gb|EEM47013.1| Riboflavin biosynthesis protein [Bacillus thuringiensis serovar
           pakistani str. T13001]
          Length = 358

 Score = 40.0 bits (92), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 44/149 (29%), Positives = 69/149 (46%), Gaps = 25/149 (16%)

Query: 8   MSCALEEAQNAALRNEIP----VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
           M  ALE A+  A++ +      VG+V V +N+I+    +    +K    HAEI AIRM  
Sbjct: 1   MKLALENAK--AMKGQTTPNPLVGSVIVNDNRIVGVGAH----MKAGEPHAEIHAIRM-- 52

Query: 64  RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFY 117
              + E      +YVTLEPC+       CA AI  A I+++     +P       G +  
Sbjct: 53  ---AGEQARGGTIYVTLEPCSHHGRTGPCAEAIVQAGIKKVVVATLDPNPLVSGRGIKIL 109

Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDFFK 146
             A      E+  G+ E+ S+++ + F K
Sbjct: 110 QDAGI----EVLVGVCEEESKKMNEVFNK 134


>gi|332687244|ref|YP_004457018.1| cytosine deaminase [Melissococcus plutonius ATCC 35311]
 gi|332371253|dbj|BAK22209.1| cytosine deaminase [Melissococcus plutonius ATCC 35311]
          Length = 164

 Score = 40.0 bits (92), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 26/104 (25%), Positives = 43/104 (41%), Gaps = 13/104 (12%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDV-------TAHAEILAI 59
           ++   +E ++ A      P GA+      ++  AGN   E +++       T HAE    
Sbjct: 13  YLKRCIEISKQAKKNGNTPFGAL------LVDDAGNILFEQENIEITEHICTGHAETTLA 66

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
               +  S++ L    LY T EPC MC   I    I  + +G +
Sbjct: 67  ARASKKYSKDFLWGCTLYTTAEPCAMCTGTIYWGNIGTIVFGMT 110


>gi|255009912|ref|ZP_05282038.1| putative riboflavin biosynthesis protein [includes:
           diaminohydroxyphosphoribosylaminopyrimidine deaminase
           [Bacteroides fragilis 3_1_12]
 gi|313147700|ref|ZP_07809893.1| riboflavin biosynthesis protein ribD [Bacteroides fragilis 3_1_12]
 gi|313136467|gb|EFR53827.1| riboflavin biosynthesis protein ribD [Bacteroides fragilis 3_1_12]
          Length = 346

 Score = 40.0 bits (92), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 37/126 (29%), Positives = 57/126 (45%), Gaps = 17/126 (13%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85
           VGAV V + +II    +    ++   AHAE+ AIR    +    +L    +YV+LEPC+ 
Sbjct: 27  VGAVIVCDEQIIGEGYH----VRCGEAHAEVNAIR---SVKDPSLLKRSTIYVSLEPCSH 79

Query: 86  ------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139
                 CA  I   +I ++  G  +P       G Q    A      E+  G+ E+  R+
Sbjct: 80  HGKTPPCADLIIEKQIPKIVIGCQDPFSKVAGKGIQKLRNA----GREVIVGVLEKECRE 135

Query: 140 IIQDFF 145
           +IQ F 
Sbjct: 136 LIQKFI 141


>gi|154706505|ref|YP_001424060.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Coxiella
           burnetii Dugway 5J108-111]
 gi|154355791|gb|ABS77253.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Coxiella
           burnetii Dugway 5J108-111]
          Length = 354

 Score = 40.0 bits (92), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 34/96 (35%), Positives = 45/96 (46%), Gaps = 19/96 (19%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85
           VGAV V ++KIIS   ++   L     HAE+ AI+        +      LYVTLEPC  
Sbjct: 29  VGAVVVKDDKIISTGFHKRSGL----PHAEVEAIKS-----LDDKARGAALYVTLEPCCH 79

Query: 86  ------CAAAISLARIRRLYYGASNPK----GGGIE 111
                 C   I  + I+ +YYG  +P     G GIE
Sbjct: 80  FGKTPPCTDLIIQSGIKAVYYGLHDPNLAVCGKGIE 115


>gi|298695036|gb|ADI98258.1| riboflavin specific deaminase [Staphylococcus aureus subsp. aureus
           ED133]
          Length = 343

 Score = 40.0 bits (92), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 35/131 (26%), Positives = 58/131 (44%), Gaps = 24/131 (18%)

Query: 25  PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84
           PVGAV V   +I+    +    L+    HAE+ A+ M     +Q+      +Y+TLEPC+
Sbjct: 20  PVGAVVVKEGRIVGIGAH----LRKGDKHAEVQALDM-----AQQNAEGATIYITLEPCS 70

Query: 85  M------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC-HHSPEIYPGISEQRS 137
                  C   I   +I ++ Y          +N    +   T   H  E+   + ++R+
Sbjct: 71  HFGLTPPCVNKIIDCKIAKVVYATK-------DNSLDTHGDDTLRDHGIEV-ECVDDERA 122

Query: 138 RQIIQDFFKER 148
            Q+ QDFFK +
Sbjct: 123 SQLYQDFFKAK 133


>gi|215918961|ref|NP_819453.2| guanine deaminase [Coxiella burnetii RSA 493]
 gi|206583846|gb|AAO89967.2| guanine deaminase [Coxiella burnetii RSA 493]
          Length = 168

 Score = 40.0 bits (92), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 32/104 (30%), Positives = 44/104 (42%), Gaps = 28/104 (26%)

Query: 25  PVGAVAVLNNKIISRAG---------NRNRELKDVTAHAEILAIRMGCRILSQEILPEVD 75
           P GAV V   +I  ++G         N + +  D TAHAE+  IR   R L+   L  + 
Sbjct: 14  PFGAVIV---QIDDKSGRVFRYWVDHNHSVDWHDPTAHAEMSVIRKAARELNVTDLGHIR 70

Query: 76  ----------------LYVTLEPCTMCAAAISLARIRRLYYGAS 103
                           +Y + EPC MC AAI  A I  L + A+
Sbjct: 71  KEDSKLSQPSEWSHCVIYSSAEPCPMCMAAIYWAGIHYLVFSAT 114


>gi|254515088|ref|ZP_05127149.1| cytosine deaminase [gamma proteobacterium NOR5-3]
 gi|219677331|gb|EED33696.1| cytosine deaminase [gamma proteobacterium NOR5-3]
          Length = 166

 Score = 40.0 bits (92), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 30/106 (28%), Positives = 45/106 (42%), Gaps = 4/106 (3%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNN-KIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
            +  A E+A+       +PVGA     N K++S   NR  +  D + H E  A R   R 
Sbjct: 21  MLGVAFEQAKRGFEEGGVPVGAAMFDGNGKLLSVGRNRRVQEGDPSIHGETDAFRKAGR- 79

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIE 111
             Q+   +  L  TL PC  C+  +   RI  +  G S    G ++
Sbjct: 80  --QKNYRDCVLVSTLAPCWYCSGLVRQFRIGTVVVGESQNFAGHLD 123


>gi|314933920|ref|ZP_07841285.1| riboflavin biosynthesis protein RibD [Staphylococcus caprae C87]
 gi|313654070|gb|EFS17827.1| riboflavin biosynthesis protein RibD [Staphylococcus caprae C87]
          Length = 349

 Score = 39.7 bits (91), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 42/161 (26%), Positives = 65/161 (40%), Gaps = 44/161 (27%)

Query: 7   FMSCALEEAQNAALRNEI--PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           FM+ A++ AQ    +  I  PVG+V V + +I+    +    LK    HAE+ A+ M   
Sbjct: 4   FMNYAIQLAQMVDGQTGINPPVGSVVVKDGRIVGLGAH----LKKGDKHAEVQALDMAG- 58

Query: 65  ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP----------KGG 108
               E   +  +YV+LEPCT       C   I    IR++ Y   +           K  
Sbjct: 59  ----ENAKDATIYVSLEPCTHHGSTPPCVNKIIEFGIRKVIYAVKDTTLASKGDEILKEA 114

Query: 109 GIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
           GIE   QF                  + + ++ +DFF  +R
Sbjct: 115 GIEVEFQF-----------------NENAAELYKDFFTAKR 138


>gi|298529749|ref|ZP_07017152.1| riboflavin biosynthesis protein RibD [Desulfonatronospira
           thiodismutans ASO3-1]
 gi|298511185|gb|EFI35088.1| riboflavin biosynthesis protein RibD [Desulfonatronospira
           thiodismutans ASO3-1]
          Length = 371

 Score = 39.7 bits (91), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 35/125 (28%), Positives = 53/125 (42%), Gaps = 16/125 (12%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85
           VGA+    ++I+ +  +R         HAE+ AI       +   L    +YVTLEPC  
Sbjct: 27  VGALVTCGDRIMGKGWHR----APGENHAEVEAIENARE--NGADLSSCRMYVTLEPCNH 80

Query: 86  ------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139
                 C AA+  A I  +  GA +P       G +F      +H   +  G+ EQ+   
Sbjct: 81  HGRTPPCTAAVIQAGIPEIIIGARDPNSQVQGGGAEFLR----NHGLRVTVGVEEQKCLD 136

Query: 140 IIQDF 144
           +I DF
Sbjct: 137 LIADF 141


>gi|323439574|gb|EGA97294.1| riboflavin specific deaminase [Staphylococcus aureus O11]
 gi|323442021|gb|EGA99657.1| riboflavin specific deaminase [Staphylococcus aureus O46]
          Length = 343

 Score = 39.7 bits (91), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 35/131 (26%), Positives = 58/131 (44%), Gaps = 24/131 (18%)

Query: 25  PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84
           PVGAV V   +I+    +    L+    HAE+ A+ M     +Q+      +Y+TLEPC+
Sbjct: 20  PVGAVVVKEGRIVGIGAH----LRKGDKHAEVQALDM-----AQQNAEGATIYITLEPCS 70

Query: 85  M------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC-HHSPEIYPGISEQRS 137
                  C   I   +I ++ Y          +N    +   T   H  E+   + ++R+
Sbjct: 71  HFGSTPPCVNKIIDCKIAKVVYATK-------DNSLDTHGDETLRDHGIEV-ECVDDERA 122

Query: 138 RQIIQDFFKER 148
            Q+ QDFFK +
Sbjct: 123 SQLYQDFFKAK 133


>gi|313680606|ref|YP_004058345.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase;
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Oceanithermus profundus DSM 14977]
 gi|313153321|gb|ADR37172.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase;
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Oceanithermus profundus DSM 14977]
          Length = 380

 Score = 39.7 bits (91), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 41/122 (33%), Positives = 54/122 (44%), Gaps = 32/122 (26%)

Query: 7   FMSCAL---EEAQNAALRNEIPVGAVAVLNNKIIS-----RAGNRNRELKDVTAHAEILA 58
           FM  AL   E A+     N I VGAV V   +I+      RAG           HAE+ A
Sbjct: 10  FMQRALALAERARGHTSPNPI-VGAVVVSGGRIVGEGFHPRAGE---------PHAEVFA 59

Query: 59  IRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP---KGGG 109
           +R      + E      +YVTLEPC        C+ A+  A + R+ Y A++P    GGG
Sbjct: 60  LRQ-----AGEAARGATVYVTLEPCNHHGRTPPCSLALLEAGVSRVVYAAADPGETSGGG 114

Query: 110 IE 111
            E
Sbjct: 115 AE 116


>gi|238490276|ref|XP_002376375.1| cytosine deaminase, putative [Aspergillus flavus NRRL3357]
 gi|220696788|gb|EED53129.1| cytosine deaminase, putative [Aspergillus flavus NRRL3357]
          Length = 162

 Score = 39.7 bits (91), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 28/91 (30%), Positives = 42/91 (46%), Gaps = 1/91 (1%)

Query: 15  AQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPE 73
           A+ A    + P G+V V    K+I    NR     DVT H E   ++   + L+      
Sbjct: 17  AREALEAGDSPFGSVLVDAAGKVIYEDRNRTVTEADVTWHPEFTIVKWAQKNLTPTERAA 76

Query: 74  VDLYVTLEPCTMCAAAISLARIRRLYYGASN 104
             +Y + E C MCAAA + A + R+ Y +S 
Sbjct: 77  ATVYTSGEHCPMCAAAHANAGLGRIVYASST 107


>gi|153940820|ref|YP_001392147.1| riboflavin biosynthesis protein RibD [Clostridium botulinum F str.
           Langeland]
 gi|152936716|gb|ABS42214.1| riboflavin biosynthesis protein RibD [Clostridium botulinum F str.
           Langeland]
 gi|295320152|gb|ADG00530.1| riboflavin biosynthesis protein RibD [Clostridium botulinum F str.
           230613]
          Length = 365

 Score = 39.7 bits (91), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 46/158 (29%), Positives = 71/158 (44%), Gaps = 29/158 (18%)

Query: 1   MKKGNVFMSCALEEAQNAALR-NEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           M+  N +M  AL+ A+    + N  P VGA+ V NNKII    ++         HAE+ A
Sbjct: 1   MEDYNFYMEKALKLAERGEGKVNPNPKVGAIVVKNNKIIGEGYHKYFG----GPHAEVYA 56

Query: 59  IRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP----KGG 108
           +R      + E      +YVTLEPC+       CA +I    I +      +P    +G 
Sbjct: 57  LRE-----AGEKAKGATIYVTLEPCSHYGKTPPCAESIVKMGISKAIIAMKDPNPLVEGR 111

Query: 109 GIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
           GI+   Q        +  E+  GI E+ S+++ + F K
Sbjct: 112 GIDILKQ--------NGIEVVTGIMEKESKKLNEVFIK 141


>gi|319941823|ref|ZP_08016145.1| AMP deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Sutterella wadsworthensis 3_1_45B]
 gi|319804756|gb|EFW01623.1| AMP deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Sutterella wadsworthensis 3_1_45B]
          Length = 415

 Score = 39.7 bits (91), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 40/114 (35%), Positives = 58/114 (50%), Gaps = 20/114 (17%)

Query: 5   NVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           + +M  AL +A+ A  R   P   VGAV V N +++  AG+  R       HAE++A+R 
Sbjct: 56  DAWMDLALAQARKA-WRISPPNPSVGAVIVRNGRLVG-AGHTQRTGGP---HAEVMALRS 110

Query: 62  GC-RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLY--YGASNPK 106
              R LS E      +YVTLEPC+       CA A+  +++ R+    G  NPK
Sbjct: 111 AFERGLSVE---GATVYVTLEPCSHYGRTPPCALALIQSKVGRVVAAVGDPNPK 161


>gi|299753369|ref|XP_001833230.2| diaminohydroxyphosphoribosylamino-pyrimidine deaminase [Coprinopsis
           cinerea okayama7#130]
 gi|298410269|gb|EAU88503.2| diaminohydroxyphosphoribosylamino-pyrimidine deaminase [Coprinopsis
           cinerea okayama7#130]
          Length = 170

 Score = 39.7 bits (91), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 41/126 (32%), Positives = 57/126 (45%), Gaps = 27/126 (21%)

Query: 6   VFMSCALEEAQNAA-LRNEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
           V+M  ALEEA+ A  +     VG V V  L +K +  +   +REL   T HAE  A+   
Sbjct: 9   VYMKMALEEAEKAVPVPGAFCVGCVLVARLLHKSVVLSTGYSRELPGNT-HAEANALAKV 67

Query: 63  CRILSQE----------------ILPEVDLYVTLEPCTM-------CAAAISLARIRRLY 99
             I  +E                IL   D+Y TLEPC++       CA A+  A++RR  
Sbjct: 68  AEISPKEWSALSESYEASSDLSKILECTDVYTTLEPCSIRTSGLSPCADALIKAKVRRCI 127

Query: 100 YGASNP 105
            G + P
Sbjct: 128 IGVNEP 133


>gi|168179301|ref|ZP_02613965.1| riboflavin biosynthesis protein RibD [Clostridium botulinum NCTC
           2916]
 gi|182669874|gb|EDT81850.1| riboflavin biosynthesis protein RibD [Clostridium botulinum NCTC
           2916]
          Length = 365

 Score = 39.7 bits (91), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 46/158 (29%), Positives = 71/158 (44%), Gaps = 29/158 (18%)

Query: 1   MKKGNVFMSCALEEAQNAALR-NEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           M+  N +M  AL+ A+    + N  P VGA+ V NNKII    ++         HAE+ A
Sbjct: 1   MEDYNFYMEKALKLAKRGEGKVNPNPKVGAIVVKNNKIIGEGYHKYFG----GPHAEVYA 56

Query: 59  IRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP----KGG 108
           +R      + E      +YVTLEPC+       CA +I    I +      +P    +G 
Sbjct: 57  LRE-----AGEKAKGATIYVTLEPCSHYGKTPPCAESIVKMGISKAIIAMKDPNPLVEGR 111

Query: 109 GIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
           GI+   Q        +  E+  GI E+ S+++ + F K
Sbjct: 112 GIDILKQ--------NGIEVVTGIMEKESKKLNEVFIK 141


>gi|120405009|ref|YP_954838.1| CMP/dCMP deaminase [Mycobacterium vanbaalenii PYR-1]
 gi|119957827|gb|ABM14832.1| CMP/dCMP deaminase, zinc-binding protein [Mycobacterium vanbaalenii
           PYR-1]
          Length = 164

 Score = 39.7 bits (91), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 30/104 (28%), Positives = 43/104 (41%), Gaps = 4/104 (3%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAG-NRNRELKDVTAHAEILAIRMGCRI 65
            +  A+EEA+       IP+GA     +  +  +G NR  +L D + HAE  A R   R 
Sbjct: 24  MLEVAVEEARKGLAEGGIPIGAALFSTDGALLGSGHNRRVQLGDPSVHAETDAFRNAGR- 82

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109
             Q       +  TL PC  C+  +    I  +  G S    GG
Sbjct: 83  --QRGYRSTIMVTTLSPCWYCSGLVRQFNIGAVVIGESRTFTGG 124


>gi|87161517|ref|YP_494408.1| riboflavin biosynthesis protein [Staphylococcus aureus subsp.
           aureus USA300_FPR3757]
 gi|88195585|ref|YP_500391.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp.
           aureus NCTC 8325]
 gi|87127491|gb|ABD22005.1| riboflavin biosynthesis protein [Staphylococcus aureus subsp.
           aureus USA300_FPR3757]
 gi|87203143|gb|ABD30953.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp.
           aureus NCTC 8325]
          Length = 334

 Score = 39.7 bits (91), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 35/131 (26%), Positives = 58/131 (44%), Gaps = 24/131 (18%)

Query: 25  PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84
           PVGAV V   +I+    +    L+    HAE+ A+ M     +Q+      +Y+TLEPC+
Sbjct: 11  PVGAVVVKEGRIVGIGAH----LRKGDKHAEVQALDM-----AQQNAEGATIYITLEPCS 61

Query: 85  M------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH-HSPEIYPGISEQRS 137
                  C   I   +I ++ Y          +N    +   T   H  E+   + ++R+
Sbjct: 62  HFGSTPPCVNKIIDCKIAKVVYATK-------DNSLDTHGDETLRAHGIEV-ECVDDERA 113

Query: 138 RQIIQDFFKER 148
            Q+ QDFFK +
Sbjct: 114 SQLYQDFFKAK 124


>gi|254568330|ref|XP_002491275.1| Subunit of tRNA-specific adenosine-34 deaminase [Pichia pastoris
           GS115]
 gi|238031072|emb|CAY68995.1| Subunit of tRNA-specific adenosine-34 deaminase [Pichia pastoris
           GS115]
 gi|328352208|emb|CCA38607.1| hypothetical protein PP7435_Chr2-0926 [Pichia pastoris CBS 7435]
          Length = 305

 Score = 39.7 bits (91), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 30/103 (29%), Positives = 51/103 (49%), Gaps = 11/103 (10%)

Query: 13  EEAQNAALRNEIPV-GAVAVLNNKI--ISRAGNRNRELKDVTAHAEILAIRMGCRILSQE 69
           E + +  L++E+P+   VA    K+  I +   +N +L     H+ +LAIR   ++   +
Sbjct: 165 ELSVSPPLKDELPIFTMVADRKGKVLTIKQDERKNHQLH----HSTMLAIRDVAKLQQND 220

Query: 70  ----ILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGG 108
               +L +  +Y T EPC MC  A+  +RI RL +      GG
Sbjct: 221 PKSYLLLDCVIYTTHEPCPMCCMALLHSRIERLVFLKDMTTGG 263


>gi|298209105|ref|YP_003717284.1| riboflavin biosynthesis protein RibD [Croceibacter atlanticus
           HTCC2559]
 gi|83849032|gb|EAP86901.1| riboflavin biosynthesis protein RibD [Croceibacter atlanticus
           HTCC2559]
          Length = 333

 Score = 39.7 bits (91), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 39/130 (30%), Positives = 60/130 (46%), Gaps = 25/130 (19%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85
           VG+V V +NKII    ++   L    AHAE+ AI     +  + +L +  +YV+LEPC+ 
Sbjct: 28  VGSVIVYDNKIIGEGWHQIAGL----AHAEVNAINA---VKDKSLLKKSTIYVSLEPCSH 80

Query: 86  ------CAAAISLARIRRLYYGASNP----KGGGIENGTQFYTLATCHHSPEIYPGISEQ 135
                 CA  I    I  +  G  +P    KG GI+        A C    +I  G+ E 
Sbjct: 81  YGKTPPCADLIIANNIPNVVIGTVDPFAKVKGQGIKKLLD----AGC----KITVGVLED 132

Query: 136 RSRQIIQDFF 145
             +++ + FF
Sbjct: 133 ECQELNKRFF 142


>gi|194881131|ref|XP_001974702.1| GG21908 [Drosophila erecta]
 gi|190657889|gb|EDV55102.1| GG21908 [Drosophila erecta]
          Length = 360

 Score = 39.7 bits (91), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 16/61 (26%), Positives = 34/61 (55%), Gaps = 1/61 (1%)

Query: 75  DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISE 134
           D+Y+  EPC MC+ A+  +R +R+++   N   G +    Q +++   +H  E++   +E
Sbjct: 296 DVYLLQEPCLMCSMALVHSRAKRVFF-VKNSDNGALATRFQLHSVRELNHHYEVFQFTTE 354

Query: 135 Q 135
           +
Sbjct: 355 E 355


>gi|15924761|ref|NP_372295.1| riboflavin specific deaminase [Staphylococcus aureus subsp. aureus
           Mu50]
 gi|15927345|ref|NP_374878.1| riboflavin specific deaminase [Staphylococcus aureus subsp. aureus
           N315]
 gi|148268246|ref|YP_001247189.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp.
           aureus JH9]
 gi|150394314|ref|YP_001316989.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp.
           aureus JH1]
 gi|156980087|ref|YP_001442346.1| riboflavin specific deaminase [Staphylococcus aureus subsp. aureus
           Mu3]
 gi|253315858|ref|ZP_04839071.1| riboflavin specific deaminase [Staphylococcus aureus subsp. aureus
           str. CF-Marseille]
 gi|255006556|ref|ZP_05145157.2| riboflavin specific deaminase [Staphylococcus aureus subsp. aureus
           Mu50-omega]
 gi|257794151|ref|ZP_05643130.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus A9781]
 gi|258420684|ref|ZP_05683623.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus A9719]
 gi|258438334|ref|ZP_05689618.1| riboflavin specific deaminase [Staphylococcus aureus A9299]
 gi|258443792|ref|ZP_05692131.1| riboflavin specific deaminase [Staphylococcus aureus A8115]
 gi|258446003|ref|ZP_05694179.1| riboflavin specific deaminase [Staphylococcus aureus A6300]
 gi|258448269|ref|ZP_05696396.1| riboflavin specific deaminase [Staphylococcus aureus A6224]
 gi|258454203|ref|ZP_05702174.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus A5937]
 gi|282893262|ref|ZP_06301496.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus A8117]
 gi|282927897|ref|ZP_06335508.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus A10102]
 gi|295406080|ref|ZP_06815888.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus A8819]
 gi|296276038|ref|ZP_06858545.1| riboflavin specific deaminase [Staphylococcus aureus subsp. aureus
           MR1]
 gi|297244995|ref|ZP_06928872.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus A8796]
 gi|13701564|dbj|BAB42857.1| riboflavin specific deaminase [Staphylococcus aureus subsp. aureus
           N315]
 gi|14247543|dbj|BAB57933.1| riboflavin specific deaminase [Staphylococcus aureus subsp. aureus
           Mu50]
 gi|147741315|gb|ABQ49613.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase /
           diaminohydroxyphosphoribosylaminopyrimidine deaminase
           [Staphylococcus aureus subsp. aureus JH9]
 gi|149946766|gb|ABR52702.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp.
           aureus JH1]
 gi|156722222|dbj|BAF78639.1| riboflavin specific deaminase [Staphylococcus aureus subsp. aureus
           Mu3]
 gi|257788123|gb|EEV26463.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus A9781]
 gi|257843288|gb|EEV67698.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus A9719]
 gi|257848378|gb|EEV72369.1| riboflavin specific deaminase [Staphylococcus aureus A9299]
 gi|257851198|gb|EEV75141.1| riboflavin specific deaminase [Staphylococcus aureus A8115]
 gi|257855245|gb|EEV78184.1| riboflavin specific deaminase [Staphylococcus aureus A6300]
 gi|257858508|gb|EEV81384.1| riboflavin specific deaminase [Staphylococcus aureus A6224]
 gi|257863655|gb|EEV86412.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus A5937]
 gi|282590407|gb|EFB95486.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus A10102]
 gi|282764580|gb|EFC04706.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus A8117]
 gi|285817450|gb|ADC37937.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase /
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Staphylococcus aureus 04-02981]
 gi|294969077|gb|EFG45098.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus A8819]
 gi|297178075|gb|EFH37323.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus A8796]
 gi|315130592|gb|EFT86578.1| riboflavin specific deaminase [Staphylococcus aureus subsp. aureus
           CGS03]
 gi|329727599|gb|EGG64055.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp.
           aureus 21172]
          Length = 347

 Score = 39.7 bits (91), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 39/151 (25%), Positives = 66/151 (43%), Gaps = 26/151 (17%)

Query: 7   FMSCALEEAQNAALRNEI--PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           FM  A++ A     +  +  PVGAV V   +I+    +    L+    HAE+ A+ M   
Sbjct: 4   FMDYAIQLANMVQGQTGVNPPVGAVVVNEGRIVGIGAH----LRKGDKHAEVQALDM--- 56

Query: 65  ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
             +Q+      +Y+TLEPC+       C   I   +I ++ Y          +N    + 
Sbjct: 57  --AQQNAEGATIYITLEPCSHFGSTPPCVNKIIDCKIAKVVYATK-------DNSLDTHG 107

Query: 119 LATCH-HSPEIYPGISEQRSRQIIQDFFKER 148
             T   H  E+   + ++R+ Q+ QDFFK +
Sbjct: 108 DETLRAHGIEV-ECVDDERASQLYQDFFKAK 137


>gi|320139809|gb|EFW31673.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp.
           aureus MRSA131]
          Length = 343

 Score = 39.7 bits (91), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 35/131 (26%), Positives = 58/131 (44%), Gaps = 24/131 (18%)

Query: 25  PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84
           PVGAV V   +I+    +    L+    HAE+ A+ M     +Q+      +Y+TLEPC+
Sbjct: 20  PVGAVVVKEGRIVGIGAH----LRKGDKHAEVQALDM-----AQQNAEGATIYITLEPCS 70

Query: 85  M------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH-HSPEIYPGISEQRS 137
                  C   I   +I ++ Y          +N    +   T   H  E+   + ++R+
Sbjct: 71  HFGSTPPCVNKIIDCKIAKVVYATK-------DNSLDTHGDETLRAHGIEV-ECVDDERA 122

Query: 138 RQIIQDFFKER 148
            Q+ QDFFK +
Sbjct: 123 SQLYQDFFKAK 133


>gi|295088113|emb|CBK69636.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase
           /5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Bacteroides xylanisolvens XB1A]
          Length = 351

 Score = 39.7 bits (91), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 44/148 (29%), Positives = 67/148 (45%), Gaps = 21/148 (14%)

Query: 7   FMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
           +M   +E A+N  L N  P   VGAV V N +II    +    ++   AHAE+ AIR   
Sbjct: 12  YMRRCIELAKNG-LCNVSPNPMVGAVIVCNGRIIGEGYH----IRCGEAHAEVNAIR--- 63

Query: 64  RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFY 117
            +  + +L    +YV+LEPC+       CA  I   +I R+  G  +P       G Q  
Sbjct: 64  SVKDESLLKRSTIYVSLEPCSHYGKTPPCADLIIEKQIPRIVIGCQDPFSEVAGRGIQKL 123

Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDFF 145
             A      E+  G+ E+  + +I+ F 
Sbjct: 124 RDA----GREVTVGVLEEECKSLIRRFI 147


>gi|302525979|ref|ZP_07278321.1| cytidine/deoxycytidine deaminase [Streptomyces sp. AA4]
 gi|302434874|gb|EFL06690.1| cytidine/deoxycytidine deaminase [Streptomyces sp. AA4]
          Length = 147

 Score = 39.7 bits (91), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 28/106 (26%), Positives = 45/106 (42%), Gaps = 4/106 (3%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
           +  ++ A EEA+       +P+GA     + K++ R  NR  +  D + HAE  A R   
Sbjct: 3   DDLLAVAREEAEAGKAEGGVPIGAALFDRDGKLLGRGHNRRVQDGDPSLHAETAAFRAAG 62

Query: 64  RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109
           R   +    +  +  TL PC  C+  +    I  +  G S    GG
Sbjct: 63  R---RPHYRDTIMVTTLSPCWYCSGLVRQFGIPHVVIGESRTFTGG 105


>gi|320529850|ref|ZP_08030927.1| riboflavin biosynthesis protein RibD [Selenomonas artemidis F0399]
 gi|320137868|gb|EFW29773.1| riboflavin biosynthesis protein RibD [Selenomonas artemidis F0399]
          Length = 369

 Score = 39.7 bits (91), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 42/118 (35%), Positives = 54/118 (45%), Gaps = 23/118 (19%)

Query: 7   FMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
           FM  AL  A+ A  R   P   VGAV V +  ++    +R         HAEI A+RM  
Sbjct: 11  FMWEALHLAEFARGRTS-PNPLVGAVIVRDGIVVGSGWHRVAG----EPHAEIHALRM-- 63

Query: 64  RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPK----GGGIE 111
              + E+     LYVTLEPC+       CA A+  A I R+    S+P     G GIE
Sbjct: 64  ---AGELARGATLYVTLEPCSHHGRTGPCAEAVIAAGIARVVTALSDPNPVVAGHGIE 118


>gi|308814577|ref|YP_003934851.1| dCMP deaminase [Shigella phage SP18]
 gi|308206169|gb|ADO19568.1| dCMP deaminase [Shigella phage SP18]
          Length = 193

 Score = 39.7 bits (91), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 24/61 (39%), Positives = 34/61 (55%), Gaps = 7/61 (11%)

Query: 40  AGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLY 99
           A ++N E+     HAE+ AI    R+ S   +    +YVTL PC  CA AIS + I++L 
Sbjct: 96  AWSKNNEI-----HAELNAILFAARMGSS--IEGATMYVTLSPCPDCAKAISQSGIKKLV 148

Query: 100 Y 100
           Y
Sbjct: 149 Y 149


>gi|314121791|ref|YP_004063910.1| deoxycytidylate deaminase [Enterobacteria phage vB_EcoM-VR7]
 gi|313151548|gb|ADR32604.1| deoxycytidylate deaminase [Enterobacteria phage vB_EcoM-VR7]
          Length = 193

 Score = 39.7 bits (91), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 24/61 (39%), Positives = 34/61 (55%), Gaps = 7/61 (11%)

Query: 40  AGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLY 99
           A ++N E+     HAE+ AI    R+ S   +    +YVTL PC  CA AIS + I++L 
Sbjct: 96  AWSKNNEI-----HAELNAILFAARMGSS--IEGATMYVTLSPCPDCAKAISQSGIKKLV 148

Query: 100 Y 100
           Y
Sbjct: 149 Y 149


>gi|298482442|ref|ZP_07000628.1| riboflavin biosynthesis protein RibD [Bacteroides sp. D22]
 gi|298271421|gb|EFI12996.1| riboflavin biosynthesis protein RibD [Bacteroides sp. D22]
          Length = 351

 Score = 39.7 bits (91), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 44/148 (29%), Positives = 67/148 (45%), Gaps = 21/148 (14%)

Query: 7   FMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
           +M   +E A+N  L N  P   VGAV V N +II    +    ++   AHAE+ AIR   
Sbjct: 12  YMRRCIELAKNG-LCNVSPNPMVGAVIVCNGRIIGEGYH----IRCGEAHAEVNAIR--- 63

Query: 64  RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFY 117
            +  + +L    +YV+LEPC+       CA  I   +I R+  G  +P       G Q  
Sbjct: 64  SVKDESLLKRSTIYVSLEPCSHYGKTPPCADLIIEKQIPRIVIGCQDPFSEVAGRGIQKL 123

Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDFF 145
             A      E+  G+ E+  + +I+ F 
Sbjct: 124 RDA----GREVTVGVLEEECKSLIRRFI 147


>gi|91763228|ref|ZP_01265192.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Candidatus
           Pelagibacter ubique HTCC1002]
 gi|91717641|gb|EAS84292.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Candidatus
           Pelagibacter ubique HTCC1002]
          Length = 366

 Score = 39.7 bits (91), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 36/112 (32%), Positives = 51/112 (45%), Gaps = 21/112 (18%)

Query: 3   KGNVFMSCALE--EAQNAALRNEIPVGAVAVLNNKIIS--RAGNRNRELKDVTAHAEILA 58
           K  +FM  AL   +A++        VG V V NNKI+S  + G +       T HAE  A
Sbjct: 11  KDKIFMELALNLAKARHGLTGINPSVGCVIVKNNKILSIGQTGFKG------TPHAEFNA 64

Query: 59  IRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASN 104
           I+      S E +    +YVTLEPC+       C   I   +I+ + YG  +
Sbjct: 65  IKN-----SHENIEGSKMYVTLEPCSHYGKTPPCTNIIIKNKIKEVVYGVED 111


>gi|193216732|ref|YP_001999974.1| deoxycytidylate deaminase [Mycoplasma arthritidis 158L3-1]
 gi|193002055|gb|ACF07270.1| deoxycytidylate deaminase [Mycoplasma arthritidis 158L3-1]
          Length = 173

 Score = 39.7 bits (91), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 20/49 (40%), Positives = 27/49 (55%), Gaps = 1/49 (2%)

Query: 53  HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
           HAE  AI +   I S  I P   LYVT  PC MCA  +  ++I+++ Y 
Sbjct: 88  HAEQNAI-INANITSSHIEPGSTLYVTHSPCAMCAKLVVQSKIKKVVYA 135


>gi|153005591|ref|YP_001379916.1| riboflavin biosynthesis protein RibD [Anaeromyxobacter sp. Fw109-5]
 gi|152029164|gb|ABS26932.1| riboflavin biosynthesis protein RibD [Anaeromyxobacter sp. Fw109-5]
          Length = 401

 Score = 39.7 bits (91), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 31/107 (28%), Positives = 49/107 (45%), Gaps = 17/107 (15%)

Query: 7   FMSCALEEAQNAALRNEI--PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           FM  A+ EA     R      VGAV V   ++++R        +    HAE++A+     
Sbjct: 34  FMRAAVREATKGLGRTSPNPAVGAVLVKGGRVVAR----GHHARAGGPHAEVVAL----- 84

Query: 65  ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP 105
             +       DLY TLEPC        C+ A+  A +RR++ G+++P
Sbjct: 85  RAAGARARGADLYTTLEPCDHFGRTPPCSVAVLEAGVRRVFVGSADP 131


>gi|228916001|ref|ZP_04079574.1| Riboflavin biosynthesis protein [Bacillus thuringiensis serovar
           pulsiensis BGSC 4CC1]
 gi|228843596|gb|EEM88672.1| Riboflavin biosynthesis protein [Bacillus thuringiensis serovar
           pulsiensis BGSC 4CC1]
          Length = 350

 Score = 39.7 bits (91), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 39/127 (30%), Positives = 59/127 (46%), Gaps = 19/127 (14%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85
           VG+V V +N+I+    +    +K    HAEI AIRM     + E      +YVTLEPC+ 
Sbjct: 11  VGSVIVNDNRIVGIGAH----MKAGEPHAEIHAIRM-----AGEQARGGTIYVTLEPCSH 61

Query: 86  ------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139
                 CA AI  A I+++     +P       G Q    A      E+  G+ E+ S++
Sbjct: 62  HGRTGPCAEAIVQAGIKKVVVATLDPNPLVSGRGIQILQDAGI----EVLVGVCEEESKK 117

Query: 140 IIQDFFK 146
           + + F K
Sbjct: 118 MNEVFNK 124


>gi|169772375|ref|XP_001820656.1| cytosine deaminase [Aspergillus oryzae RIB40]
 gi|83768517|dbj|BAE58654.1| unnamed protein product [Aspergillus oryzae]
          Length = 162

 Score = 39.7 bits (91), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 28/91 (30%), Positives = 42/91 (46%), Gaps = 1/91 (1%)

Query: 15  AQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPE 73
           A+ A    + P G+V V    K+I    NR     DVT H E   ++   + L+      
Sbjct: 17  AREALEAGDSPFGSVLVDAAGKVIYEDRNRTVTEADVTWHPEFTIVKWAQKNLTPTERAA 76

Query: 74  VDLYVTLEPCTMCAAAISLARIRRLYYGASN 104
             +Y + E C MCAAA + A + R+ Y +S 
Sbjct: 77  ATVYTSGEHCPMCAAAHANAGLGRIVYASST 107


>gi|160885546|ref|ZP_02066549.1| hypothetical protein BACOVA_03546 [Bacteroides ovatus ATCC 8483]
 gi|156109168|gb|EDO10913.1| hypothetical protein BACOVA_03546 [Bacteroides ovatus ATCC 8483]
          Length = 351

 Score = 39.7 bits (91), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 45/148 (30%), Positives = 67/148 (45%), Gaps = 21/148 (14%)

Query: 7   FMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
           +M   +E A+N  L N  P   VGAV V N +II    +    ++   AHAE+ AIR   
Sbjct: 12  YMRRCIELAKNG-LCNVPPNPTVGAVIVCNGRIIGEGYH----IRCGEAHAEVNAIR--- 63

Query: 64  RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFY 117
            +  + +L    +YV+LEPC+       CA  I   +I R+  G  +P       G Q  
Sbjct: 64  SVKDESLLKHSTIYVSLEPCSHYGKTPPCADLIIEKQIPRIVIGCQDPFSEVAGRGIQKL 123

Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDFF 145
             A      E+  GI E+  + +I+ F 
Sbjct: 124 RDA----GREVTVGILEEECQSLIRRFI 147


>gi|54297135|ref|YP_123504.1| riboflavin biosynthesis protein RibD [Legionella pneumophila str.
           Paris]
 gi|53750920|emb|CAH12331.1| Riboflavin biosynthesis protein RibD [Legionella pneumophila str.
           Paris]
          Length = 357

 Score = 39.7 bits (91), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 39/109 (35%), Positives = 50/109 (45%), Gaps = 21/109 (19%)

Query: 7   FMSCALEEAQ--NAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           F+  ALE+A+           VGAVAV N  II++A +R       T HAE L       
Sbjct: 5   FLLAALEQAKLGRGFCAPNPSVGAVAVQNGNIIAQAWHRGAG----TPHAEQL------- 53

Query: 65  ILSQ--EILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP 105
           +LSQ     P V LYVTLEPC        C  AI    I+ + +   +P
Sbjct: 54  LLSQIPPQTPGVTLYVTLEPCNHWGKTPPCVDAIINHGIQEVVFSYFDP 102


>gi|221140247|ref|ZP_03564740.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase
           [Staphylococcus aureus subsp. aureus str. JKD6009]
          Length = 347

 Score = 39.7 bits (91), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 39/151 (25%), Positives = 66/151 (43%), Gaps = 26/151 (17%)

Query: 7   FMSCALEEAQNAALRNEI--PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           FM  A++ A     +  +  PVGAV V   +I+    +    L+    HAE+ A+ M   
Sbjct: 4   FMDYAIQLANMVQGQTGVNPPVGAVIVKEGRIVGIGAH----LRKGDKHAEVQALDM--- 56

Query: 65  ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
             +Q+      +Y+TLEPC+       C   I   +I ++ Y          +N    + 
Sbjct: 57  --AQQNAEGATIYITLEPCSHFGSTPPCVNKIIDCKIAKVVYATK-------DNSLDTHG 107

Query: 119 LATCH-HSPEIYPGISEQRSRQIIQDFFKER 148
             T   H  E+   + ++R+ Q+ QDFFK +
Sbjct: 108 DETLRAHGIEV-ECVDDERASQLYQDFFKAK 137


>gi|215410398|ref|ZP_03419206.1| deaminase [Mycobacterium tuberculosis 94_M4241A]
          Length = 140

 Score = 39.7 bits (91), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 21/48 (43%), Positives = 24/48 (50%)

Query: 43 RNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAI 90
          R  +  D TAHAE LAIR  C  L  E L    L V   PC MC  ++
Sbjct: 10 RWAQTNDPTAHAESLAIRAACTKLGTEHLVGTTLNVLAHPCPMCYGSL 57


>gi|291527733|emb|CBK93319.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase
           /5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Eubacterium rectale M104/1]
          Length = 388

 Score = 39.3 bits (90), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 38/108 (35%), Positives = 53/108 (49%), Gaps = 25/108 (23%)

Query: 26  VGAVAVLNNKIISRAGN-RNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84
           VGAV V + +II    + R  EL     HAE  A++  C+   Q      ++YVTLEPC 
Sbjct: 27  VGAVIVKDGRIIGEGWHERYGEL-----HAERNALKH-CKESPQG----AEMYVTLEPCC 76

Query: 85  M------CAAAISLARIRRLYYGASNPK----GGGI----ENGTQFYT 118
                  C  A+  A I+R+Y G+ +P     GGGI    E+G +  T
Sbjct: 77  HHGKQPPCVEAVIEAGIKRVYVGSDDPNPLVAGGGIKILKEHGIEVVT 124


>gi|322807186|emb|CBZ04760.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Clostridium
           botulinum H04402 065]
          Length = 365

 Score = 39.3 bits (90), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 46/158 (29%), Positives = 71/158 (44%), Gaps = 29/158 (18%)

Query: 1   MKKGNVFMSCALEEAQNAALR-NEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           M+  N +M  AL+ A+    + N  P VGA+ V NNKII    ++         HAE+ A
Sbjct: 1   MEDYNFYMEKALKLAERGEGKVNPNPKVGAIVVKNNKIIGEGYHKYFG----GPHAEVYA 56

Query: 59  IRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP----KGG 108
           +R      + E      +YVTLEPC+       CA +I    I +      +P    +G 
Sbjct: 57  LRE-----AGERAKGATIYVTLEPCSHYGKTPPCAESIVKMGISKAIIAMKDPNPLVEGR 111

Query: 109 GIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
           GI+   Q        +  E+  GI E+ S+++ + F K
Sbjct: 112 GIDILKQ--------NGIEVVTGIMEKESKKLNEVFIK 141


>gi|229145969|ref|ZP_04274348.1| Riboflavin biosynthesis protein [Bacillus cereus BDRD-ST24]
 gi|228637577|gb|EEK94028.1| Riboflavin biosynthesis protein [Bacillus cereus BDRD-ST24]
          Length = 348

 Score = 39.3 bits (90), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 38/127 (29%), Positives = 59/127 (46%), Gaps = 19/127 (14%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85
           VG+V V +N+I+    +    +K    HAEI AIRM     + E      +YVTLEPC+ 
Sbjct: 11  VGSVIVNDNRIVGVGAH----MKAGEPHAEIHAIRM-----AGEQARGATIYVTLEPCSH 61

Query: 86  ------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139
                 CA AI  A I+++     +P       G +    A      E+  G+ E+ S++
Sbjct: 62  HGRTGPCAEAIVQAGIKKVVVATLDPNPLVSGRGIKILQDAGI----EVLVGVCEEESKK 117

Query: 140 IIQDFFK 146
           + + F K
Sbjct: 118 MNEVFNK 124


>gi|15607968|ref|NP_215343.1| deaminase [Mycobacterium tuberculosis H37Rv]
 gi|31792016|ref|NP_854509.1| deaminase [Mycobacterium bovis AF2122/97]
 gi|121636752|ref|YP_976975.1| putative deaminase [Mycobacterium bovis BCG str. Pasteur 1173P2]
 gi|148660606|ref|YP_001282129.1| putative deaminase [Mycobacterium tuberculosis H37Ra]
 gi|148822035|ref|YP_001286788.1| deaminase [Mycobacterium tuberculosis F11]
 gi|167967516|ref|ZP_02549793.1| hypothetical deaminase [Mycobacterium tuberculosis H37Ra]
 gi|215402619|ref|ZP_03414800.1| deaminase [Mycobacterium tuberculosis 02_1987]
 gi|215410407|ref|ZP_03419215.1| deaminase [Mycobacterium tuberculosis 94_M4241A]
 gi|215429679|ref|ZP_03427598.1| deaminase [Mycobacterium tuberculosis EAS054]
 gi|219556687|ref|ZP_03535763.1| deaminase [Mycobacterium tuberculosis T17]
 gi|224989223|ref|YP_002643910.1| putative deaminase [Mycobacterium bovis BCG str. Tokyo 172]
 gi|253797775|ref|YP_003030776.1| deaminase [Mycobacterium tuberculosis KZN 1435]
 gi|254231141|ref|ZP_04924468.1| hypothetical protein TBCG_00818 [Mycobacterium tuberculosis C]
 gi|254363766|ref|ZP_04979812.1| hypothetical deaminase [Mycobacterium tuberculosis str. Haarlem]
 gi|260199843|ref|ZP_05767334.1| deaminase [Mycobacterium tuberculosis T46]
 gi|260204018|ref|ZP_05771509.1| deaminase [Mycobacterium tuberculosis K85]
 gi|289442232|ref|ZP_06431976.1| deaminase [Mycobacterium tuberculosis T46]
 gi|289553086|ref|ZP_06442296.1| deaminase [Mycobacterium tuberculosis KZN 605]
 gi|289568782|ref|ZP_06449009.1| deaminase [Mycobacterium tuberculosis T17]
 gi|289573447|ref|ZP_06453674.1| deaminase [Mycobacterium tuberculosis K85]
 gi|289744553|ref|ZP_06503931.1| deaminase [Mycobacterium tuberculosis 02_1987]
 gi|289752878|ref|ZP_06512256.1| hypothetical deaminase [Mycobacterium tuberculosis EAS054]
 gi|289756916|ref|ZP_06516294.1| deaminase [Mycobacterium tuberculosis T85]
 gi|289760958|ref|ZP_06520336.1| deaminase [Mycobacterium tuberculosis GM 1503]
 gi|294996308|ref|ZP_06801999.1| deaminase [Mycobacterium tuberculosis 210]
 gi|297633340|ref|ZP_06951120.1| deaminase [Mycobacterium tuberculosis KZN 4207]
 gi|297730324|ref|ZP_06959442.1| deaminase [Mycobacterium tuberculosis KZN R506]
 gi|298524324|ref|ZP_07011733.1| hypothetical deaminase [Mycobacterium tuberculosis 94_M4241A]
 gi|306774951|ref|ZP_07413288.1| deaminase [Mycobacterium tuberculosis SUMu001]
 gi|306782137|ref|ZP_07420474.1| deaminase [Mycobacterium tuberculosis SUMu002]
 gi|306783494|ref|ZP_07421816.1| deaminase [Mycobacterium tuberculosis SUMu003]
 gi|306787858|ref|ZP_07426180.1| deaminase [Mycobacterium tuberculosis SUMu004]
 gi|306794851|ref|ZP_07433153.1| deaminase [Mycobacterium tuberculosis SUMu005]
 gi|306796597|ref|ZP_07434899.1| deaminase [Mycobacterium tuberculosis SUMu006]
 gi|306802455|ref|ZP_07439123.1| deaminase [Mycobacterium tuberculosis SUMu008]
 gi|306806664|ref|ZP_07443332.1| deaminase [Mycobacterium tuberculosis SUMu007]
 gi|306966863|ref|ZP_07479524.1| deaminase [Mycobacterium tuberculosis SUMu009]
 gi|306971054|ref|ZP_07483715.1| deaminase [Mycobacterium tuberculosis SUMu010]
 gi|307078786|ref|ZP_07487956.1| deaminase [Mycobacterium tuberculosis SUMu011]
 gi|307083347|ref|ZP_07492460.1| deaminase [Mycobacterium tuberculosis SUMu012]
 gi|313657649|ref|ZP_07814529.1| deaminase [Mycobacterium tuberculosis KZN V2475]
 gi|2916886|emb|CAA17634.1| POSSIBLE DEAMINASE [Mycobacterium tuberculosis H37Rv]
 gi|31617603|emb|CAD93713.1| POSSIBLE DEAMINASE [Mycobacterium bovis AF2122/97]
 gi|121492399|emb|CAL70867.1| Possible deaminase [Mycobacterium bovis BCG str. Pasteur 1173P2]
 gi|124600200|gb|EAY59210.1| hypothetical protein TBCG_00818 [Mycobacterium tuberculosis C]
 gi|134149280|gb|EBA41325.1| hypothetical deaminase [Mycobacterium tuberculosis str. Haarlem]
 gi|148504758|gb|ABQ72567.1| putative deaminase [Mycobacterium tuberculosis H37Ra]
 gi|148720562|gb|ABR05187.1| hypothetical deaminase [Mycobacterium tuberculosis F11]
 gi|224772336|dbj|BAH25142.1| putative deaminase [Mycobacterium bovis BCG str. Tokyo 172]
 gi|253319279|gb|ACT23882.1| deaminase [Mycobacterium tuberculosis KZN 1435]
 gi|289415151|gb|EFD12391.1| deaminase [Mycobacterium tuberculosis T46]
 gi|289437718|gb|EFD20211.1| deaminase [Mycobacterium tuberculosis KZN 605]
 gi|289537878|gb|EFD42456.1| deaminase [Mycobacterium tuberculosis K85]
 gi|289542536|gb|EFD46184.1| deaminase [Mycobacterium tuberculosis T17]
 gi|289685081|gb|EFD52569.1| deaminase [Mycobacterium tuberculosis 02_1987]
 gi|289693465|gb|EFD60894.1| hypothetical deaminase [Mycobacterium tuberculosis EAS054]
 gi|289708464|gb|EFD72480.1| deaminase [Mycobacterium tuberculosis GM 1503]
 gi|289712480|gb|EFD76492.1| deaminase [Mycobacterium tuberculosis T85]
 gi|298494118|gb|EFI29412.1| hypothetical deaminase [Mycobacterium tuberculosis 94_M4241A]
 gi|308216505|gb|EFO75904.1| deaminase [Mycobacterium tuberculosis SUMu001]
 gi|308325158|gb|EFP14009.1| deaminase [Mycobacterium tuberculosis SUMu002]
 gi|308331715|gb|EFP20566.1| deaminase [Mycobacterium tuberculosis SUMu003]
 gi|308335513|gb|EFP24364.1| deaminase [Mycobacterium tuberculosis SUMu004]
 gi|308336856|gb|EFP25707.1| deaminase [Mycobacterium tuberculosis SUMu005]
 gi|308342990|gb|EFP31841.1| deaminase [Mycobacterium tuberculosis SUMu006]
 gi|308346873|gb|EFP35724.1| deaminase [Mycobacterium tuberculosis SUMu007]
 gi|308350814|gb|EFP39665.1| deaminase [Mycobacterium tuberculosis SUMu008]
 gi|308355447|gb|EFP44298.1| deaminase [Mycobacterium tuberculosis SUMu009]
 gi|308359403|gb|EFP48254.1| deaminase [Mycobacterium tuberculosis SUMu010]
 gi|308363308|gb|EFP52159.1| deaminase [Mycobacterium tuberculosis SUMu011]
 gi|308366959|gb|EFP55810.1| deaminase [Mycobacterium tuberculosis SUMu012]
 gi|326904953|gb|EGE51886.1| deaminase [Mycobacterium tuberculosis W-148]
 gi|328457555|gb|AEB02978.1| deaminase [Mycobacterium tuberculosis KZN 4207]
          Length = 140

 Score = 39.3 bits (90), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 21/48 (43%), Positives = 24/48 (50%)

Query: 43 RNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAI 90
          R  +  D TAHAE LAIR  C  L  E L    L V   PC MC  ++
Sbjct: 10 RWAQTNDPTAHAESLAIRAACTKLGTEHLVGTTLNVLAHPCPMCYGSL 57


>gi|212638856|ref|YP_002315376.1| riboflavin-specific pyrimidine reductase/deaminase [Anoxybacillus
           flavithermus WK1]
 gi|212560336|gb|ACJ33391.1| Riboflavin-specific pyrimidine reductase/deaminase [Anoxybacillus
           flavithermus WK1]
          Length = 358

 Score = 39.3 bits (90), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 37/120 (30%), Positives = 57/120 (47%), Gaps = 25/120 (20%)

Query: 7   FMSCALEEAQNAALRNEIP----VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
           +M  AL+ AQ+A  R +      VGAV V + +I+    +    LK    HAE+ A+RM 
Sbjct: 5   YMRFALQLAQSA--RGQTSPNPLVGAVVVKHGEIVGFGAH----LKAGEPHAEVHALRM- 57

Query: 63  CRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPK----GGGIEN 112
               + E      +YVTLEPC+       CA  +   +++R+    ++P     G GIE 
Sbjct: 58  ----AGEKAEGATVYVTLEPCSHYGRTPPCADLLIEKKVKRVVVATTDPNPLVAGKGIEK 113


>gi|146412291|ref|XP_001482117.1| hypothetical protein PGUG_05880 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 365

 Score = 39.3 bits (90), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 18/65 (27%), Positives = 34/65 (52%)

Query: 76  LYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQ 135
           +Y + EPC MC  A+  +RI ++ Y    P  GG+E+  Q     + +   +I+  I E+
Sbjct: 287 VYTSHEPCIMCCMALVHSRISKITYIKPVPSTGGLESHYQLGDRPSLNWRFKIWKWIGEE 346

Query: 136 RSRQI 140
             +++
Sbjct: 347 EMQKL 351


>gi|253735372|ref|ZP_04869537.1| riboflavin specific deaminase [Staphylococcus aureus subsp. aureus
           TCH130]
 gi|269203407|ref|YP_003282676.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp.
           aureus ED98]
 gi|253726661|gb|EES95390.1| riboflavin specific deaminase [Staphylococcus aureus subsp. aureus
           TCH130]
 gi|262075697|gb|ACY11670.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp.
           aureus ED98]
          Length = 343

 Score = 39.3 bits (90), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 35/131 (26%), Positives = 58/131 (44%), Gaps = 24/131 (18%)

Query: 25  PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84
           PVGAV V   +I+    +    L+    HAE+ A+ M     +Q+      +Y+TLEPC+
Sbjct: 20  PVGAVVVNEGRIVGIGAH----LRKGDKHAEVQALDM-----AQQNAEGATIYITLEPCS 70

Query: 85  M------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH-HSPEIYPGISEQRS 137
                  C   I   +I ++ Y          +N    +   T   H  E+   + ++R+
Sbjct: 71  HFGSTPPCVNKIIDCKIAKVVYATK-------DNSLDTHGDETLRAHGIEV-ECVDDERA 122

Query: 138 RQIIQDFFKER 148
            Q+ QDFFK +
Sbjct: 123 SQLYQDFFKAK 133


>gi|320531168|ref|ZP_08032158.1| guanine deaminase family protein [Actinomyces sp. oral taxon 171
          str. F0337]
 gi|320136617|gb|EFW28575.1| guanine deaminase family protein [Actinomyces sp. oral taxon 171
          str. F0337]
          Length = 157

 Score = 39.3 bits (90), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 28/73 (38%), Positives = 35/73 (47%), Gaps = 1/73 (1%)

Query: 24 IPVGAVAVLNNKIISRAG-NRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEP 82
          +P   V V   ++IS  G NR +E  D +AHAEI AIR       +  L    +  T EP
Sbjct: 25 LPFVGVIVDGQQVISEFGVNRVQETGDPSAHAEITAIRDALTSSGRTDLRGTTILATGEP 84

Query: 83 CTMCAAAISLARI 95
          C MC      ARI
Sbjct: 85 CGMCYRHAVNARI 97


>gi|195487415|ref|XP_002091899.1| GE11982 [Drosophila yakuba]
 gi|194178000|gb|EDW91611.1| GE11982 [Drosophila yakuba]
          Length = 360

 Score = 39.3 bits (90), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 16/61 (26%), Positives = 34/61 (55%), Gaps = 1/61 (1%)

Query: 75  DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISE 134
           D+Y+  EPC MC+ A+  +R +R+++   N   G +    Q +++   +H  E++   +E
Sbjct: 296 DVYLLQEPCLMCSMALVHSRAKRVFF-VKNSDNGALATRFQLHSVRELNHHYEVFQFTTE 354

Query: 135 Q 135
           +
Sbjct: 355 E 355


>gi|260185721|ref|ZP_05763195.1| deaminase [Mycobacterium tuberculosis CPHL_A]
 gi|289446393|ref|ZP_06436137.1| deaminase [Mycobacterium tuberculosis CPHL_A]
 gi|289419351|gb|EFD16552.1| deaminase [Mycobacterium tuberculosis CPHL_A]
          Length = 140

 Score = 39.3 bits (90), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 21/48 (43%), Positives = 24/48 (50%)

Query: 43 RNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAI 90
          R  +  D TAHAE LAIR  C  L  E L    L V   PC MC  ++
Sbjct: 10 RWAQTNDPTAHAESLAIRAACTKLGTEHLVGTTLNVLAHPCPMCYGSL 57


>gi|190349179|gb|EDK41782.2| hypothetical protein PGUG_05880 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 365

 Score = 39.3 bits (90), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 18/65 (27%), Positives = 34/65 (52%)

Query: 76  LYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQ 135
           +Y + EPC MC  A+  +RI ++ Y    P  GG+E+  Q     + +   +I+  I E+
Sbjct: 287 VYTSHEPCIMCCMALVHSRISKITYIKPVPSTGGLESHYQLGDRPSLNWRFKIWKWIGEE 346

Query: 136 RSRQI 140
             +++
Sbjct: 347 EMQKL 351


>gi|189464287|ref|ZP_03013072.1| hypothetical protein BACINT_00628 [Bacteroides intestinalis DSM
           17393]
 gi|189438077|gb|EDV07062.1| hypothetical protein BACINT_00628 [Bacteroides intestinalis DSM
           17393]
          Length = 345

 Score = 39.3 bits (90), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 44/148 (29%), Positives = 63/148 (42%), Gaps = 21/148 (14%)

Query: 7   FMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
           +M   ++ AQN    N  P   VGAV V + KII         ++   AHAE+ AIR   
Sbjct: 6   YMRRCIQLAQNG-FCNAAPNPMVGAVIVCDGKIIGEG----YHVRCGEAHAEVNAIR--- 57

Query: 64  RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFY 117
            +    +L    +YV+LEPC+       CA  I   +I R+  G  +P       G Q  
Sbjct: 58  SVKDTSLLKRSTIYVSLEPCSHHGKTPPCADLIIEKQIPRIVIGCQDPFSKVAGRGIQKL 117

Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDFF 145
             A      E+  G+ E   R +I+ F 
Sbjct: 118 KDA----GREVTVGVLENECRHLIRRFI 141


>gi|253681051|ref|ZP_04861854.1| riboflavin biosynthesis protein RibD [Clostridium botulinum D str.
           1873]
 gi|253562900|gb|EES92346.1| riboflavin biosynthesis protein RibD [Clostridium botulinum D str.
           1873]
          Length = 372

 Score = 39.3 bits (90), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 37/127 (29%), Positives = 62/127 (48%), Gaps = 19/127 (14%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85
           VGA+ V +NKII   G   R  ++   HAEI A++      ++E +    +YVTLEPC+ 
Sbjct: 26  VGAIIVKDNKIIGE-GYHKRFGEN---HAEINALKN-----AKEDVSGATMYVTLEPCSH 76

Query: 86  ------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139
                 C  AI  + I+++  G S+P       GT+        +  E+  GI ++  ++
Sbjct: 77  YGKTPPCVNAIIKSGIKKVIIGMSDPNPLVAGRGTRILK----DNGIEVVEGILKEEVKK 132

Query: 140 IIQDFFK 146
           + + F K
Sbjct: 133 VNEIFIK 139


>gi|93279919|pdb|2G84|A Chain A, Cytidine And Deoxycytidylate Deaminase Zinc-Binding Region
           From Nitrosomonas Europaea.
 gi|93279920|pdb|2G84|B Chain B, Cytidine And Deoxycytidylate Deaminase Zinc-Binding Region
           From Nitrosomonas Europaea
          Length = 197

 Score = 39.3 bits (90), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 31/119 (26%), Positives = 51/119 (42%), Gaps = 17/119 (14%)

Query: 36  IISRAGNRNRELKDVTAHAEILAI-----RMGCRILSQEILPEVDLYVTLEPCTMCAAAI 90
           +I+   NR    +   AHAEILA+     ++    LS + LP  +L  + EPC MC  A+
Sbjct: 62  LIAAGTNRVVPGRCSAAHAEILALSLAQAKLDTHDLSADGLPACELVTSAEPCVMCFGAV 121

Query: 91  SLARIRRLYYGA--SNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
             + +R L   A   + +  G + G +          PE + G  E R   +     ++
Sbjct: 122 IWSGVRSLVCAARSDDVEAIGFDEGPR----------PENWMGGLEARGITVTTGLLRD 170


>gi|93006874|ref|YP_581311.1| CMP/dCMP deaminase, zinc-binding [Psychrobacter cryohalolentis K5]
 gi|92394552|gb|ABE75827.1| CMP/dCMP deaminase, zinc-binding [Psychrobacter cryohalolentis K5]
          Length = 165

 Score = 39.3 bits (90), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 25/97 (25%), Positives = 50/97 (51%), Gaps = 2/97 (2%)

Query: 11  ALEEAQNAALRNEIPVGAVAVLNN-KIISRAGNRNRELKDVTAHAEILAIRMGCRILSQE 69
           ++E A  A    + P G+V V  + +++    NR   + D T H EI  ++   + ++ E
Sbjct: 18  SIELATEALEAGDEPFGSVLVAGDGQVLHEDRNRANSV-DATYHPEIAVVQWAAKHMTAE 76

Query: 70  ILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPK 106
              +  +Y + E C MC+AA + + + R+ Y +S+ +
Sbjct: 77  ARAQAVVYTSGEHCAMCSAAHAWSGLGRIVYVSSSKQ 113


>gi|260172134|ref|ZP_05758546.1| riboflavin biosynthesis protein ribD [Bacteroides sp. D2]
 gi|315920443|ref|ZP_07916683.1| conserved hypothetical protein [Bacteroides sp. D2]
 gi|313694318|gb|EFS31153.1| conserved hypothetical protein [Bacteroides sp. D2]
          Length = 351

 Score = 39.3 bits (90), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 44/147 (29%), Positives = 67/147 (45%), Gaps = 21/147 (14%)

Query: 7   FMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
           +M   +E A+N  L N  P   VGAV V N +II    +    ++   AHAE+ AIR   
Sbjct: 12  YMRRCIELAKNG-LCNVPPNPMVGAVIVCNGRIIGEGYH----IRCGEAHAEVNAIR--- 63

Query: 64  RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFY 117
            +  + +L    +YV+LEPC+       CA  I   +I R+  G  +P       G Q  
Sbjct: 64  SVKDESLLKHSTIYVSLEPCSHYGKTPPCADLIIEKQIPRIVIGCQDPFSEVAGRGIQKL 123

Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDF 144
             A      E+  G+ E+  + +I+ F
Sbjct: 124 RDA----GREVIVGVLEEECQSLIRRF 146


>gi|218752491|ref|ZP_03531287.1| deaminase [Mycobacterium tuberculosis GM 1503]
 gi|254549800|ref|ZP_05140247.1| deaminase [Mycobacterium tuberculosis '98-R604 INH-RIF-EM']
          Length = 210

 Score = 39.3 bits (90), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 21/48 (43%), Positives = 24/48 (50%)

Query: 43  RNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAI 90
           R  +  D TAHAE LAIR  C  L  E L    L V   PC MC  ++
Sbjct: 80  RWAQTNDPTAHAESLAIRAACTKLGTEHLVGTTLNVLAHPCPMCYGSL 127


>gi|215444965|ref|ZP_03431717.1| deaminase [Mycobacterium tuberculosis T85]
          Length = 215

 Score = 39.3 bits (90), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 21/48 (43%), Positives = 24/48 (50%)

Query: 43  RNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAI 90
           R  +  D TAHAE LAIR  C  L  E L    L V   PC MC  ++
Sbjct: 85  RWAQTNDPTAHAESLAIRAACTKLGTEHLVGTTLNVLAHPCPMCYGSL 132


>gi|291334222|gb|ADD93888.1| predicted diaminohydroxyphosphoribosylaminopyrimidine deaminase
           [uncultured marine bacterium MedDCM-OCT-S08-C1463]
          Length = 348

 Score = 39.3 bits (90), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 43/98 (43%), Gaps = 13/98 (13%)

Query: 24  IPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEV---DLYVTL 80
           + VG V V  N+II R        K   +HAEI AI        +  L ++   DL+VTL
Sbjct: 25  VKVGCVIVKENRIIGRGFYE----KYGGSHAEINAINDVKEKYKKNYLSKLSGSDLFVTL 80

Query: 81  EPCT------MCAAAISLARIRRLYYGASNPKGGGIEN 112
           EPC+       C   +     +R+  G  +P   GI N
Sbjct: 81  EPCSKKGKTGACVNELKKYDFKRIVVGTKDPTQNGINN 118


>gi|190575897|ref|YP_001973742.1| putative deaminase [Stenotrophomonas maltophilia K279a]
 gi|190013819|emb|CAQ47457.1| putative deaminase [Stenotrophomonas maltophilia K279a]
          Length = 150

 Score = 39.3 bits (90), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 31/120 (25%), Positives = 48/120 (40%), Gaps = 8/120 (6%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNN-KIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
            +  A+ EA+       +P+GA    N+ +++    NR  +  D + H E  A R   R 
Sbjct: 10  LLQTAIAEARQGLAEGGVPIGAALYHNDGRLLGCGHNRRVQEGDPSVHGETDAFRKAGR- 68

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI----ENGTQFYTLAT 121
             Q    +  +  TL PC  C+  +    I  +  G S    GGI    ENG     L +
Sbjct: 69  --QRRYQDTIMVTTLAPCWYCSGLVRQFNIGTVVVGESRTFQGGIDWLRENGVNVIDLDS 126


>gi|30248078|ref|NP_840148.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Nitrosomonas europaea ATCC 19718]
 gi|30179963|emb|CAD83958.1| Cytidine and deoxycytidylate deaminase zinc-binding region
           [Nitrosomonas europaea ATCC 19718]
          Length = 193

 Score = 39.3 bits (90), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 31/119 (26%), Positives = 51/119 (42%), Gaps = 17/119 (14%)

Query: 36  IISRAGNRNRELKDVTAHAEILAI-----RMGCRILSQEILPEVDLYVTLEPCTMCAAAI 90
           +I+   NR    +   AHAEILA+     ++    LS + LP  +L  + EPC MC  A+
Sbjct: 60  LIAAGTNRVVPGRCSAAHAEILALSLAQAKLDTHDLSADGLPACELVTSAEPCVMCFGAV 119

Query: 91  SLARIRRLYYGA--SNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
             + +R L   A   + +  G + G +          PE + G  E R   +     ++
Sbjct: 120 IWSGVRSLVCAARSDDVEAIGFDEGPR----------PENWMGGLEARGITVTTGLLRD 168


>gi|228940450|ref|ZP_04103019.1| Riboflavin biosynthesis protein [Bacillus thuringiensis serovar
           berliner ATCC 10792]
 gi|228979928|ref|ZP_04140248.1| Riboflavin biosynthesis protein [Bacillus thuringiensis Bt407]
 gi|228779807|gb|EEM28054.1| Riboflavin biosynthesis protein [Bacillus thuringiensis Bt407]
 gi|228819215|gb|EEM65271.1| Riboflavin biosynthesis protein [Bacillus thuringiensis serovar
           berliner ATCC 10792]
          Length = 348

 Score = 39.3 bits (90), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 38/127 (29%), Positives = 59/127 (46%), Gaps = 19/127 (14%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85
           VG+V V +N+I+    +    +K    HAEI AIRM     + E      +YVTLEPC+ 
Sbjct: 11  VGSVIVNDNRIVGVGAH----MKAGEPHAEIHAIRM-----AGEQARGATIYVTLEPCSH 61

Query: 86  ------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139
                 CA AI  A I+++     +P       G +    A      E+  G+ E+ S++
Sbjct: 62  YGRTGPCAEAIVQAGIKKVVVATLDPNPLVSGRGIKILQDAGI----EVLVGVCEEESKK 117

Query: 140 IIQDFFK 146
           + + F K
Sbjct: 118 MNEVFNK 124


>gi|241949383|ref|XP_002417414.1| tRNA-specific adenosine deaminase 3, putative; tRNA-specific
           adenosine-34 deaminase subunit, putative [Candida
           dubliniensis CD36]
 gi|223640752|emb|CAX45066.1| tRNA-specific adenosine deaminase 3, putative [Candida dubliniensis
           CD36]
          Length = 327

 Score = 39.3 bits (90), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 17/41 (41%), Positives = 23/41 (56%)

Query: 76  LYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116
           +Y T EPC MCA A+  +RI R+ Y       GG+E+  Q 
Sbjct: 250 VYTTHEPCVMCAMALVHSRIGRIIYLKPEKSSGGLESHYQL 290


>gi|148264237|ref|YP_001230943.1| riboflavin biosynthesis protein RibD [Geobacter uraniireducens Rf4]
 gi|146397737|gb|ABQ26370.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase /
           diaminohydroxyphosphoribosylaminopyrimidine deaminase
           [Geobacter uraniireducens Rf4]
          Length = 368

 Score = 39.3 bits (90), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 27/86 (31%), Positives = 43/86 (50%), Gaps = 15/86 (17%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85
           VG V V +  ++    ++    K  T HAE+ A+R      + E+    D+YVTLEPC  
Sbjct: 29  VGCVIVKDGAVVGEGWHK----KAGTPHAEVHALRQ-----AGEMARGADVYVTLEPCAH 79

Query: 86  ------CAAAISLARIRRLYYGASNP 105
                 CA A+  A++ R++ G  +P
Sbjct: 80  FGKTPPCADALIAAKVCRVHIGMVDP 105


>gi|52841411|ref|YP_095210.1| riboflavin biosynthesis protein RibD [Legionella pneumophila
          subsp. pneumophila str. Philadelphia 1]
 gi|52628522|gb|AAU27263.1| riboflavin biosynthesis protein RibD [Legionella pneumophila
          subsp. pneumophila str. Philadelphia 1]
          Length = 357

 Score = 39.3 bits (90), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 34/81 (41%), Positives = 41/81 (50%), Gaps = 15/81 (18%)

Query: 7  FMSCALEEAQ--NAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
          F+  ALE+A+           VGAVAV N  II++A +R       T HAE L       
Sbjct: 5  FLLAALEQAKLGRGFCAPNPSVGAVAVQNGNIIAQAWHRGAG----TPHAEQL------- 53

Query: 65 ILSQ--EILPEVDLYVTLEPC 83
          +LSQ     P V LYVTLEPC
Sbjct: 54 LLSQIPPQTPGVTLYVTLEPC 74


>gi|254521581|ref|ZP_05133636.1| cytosine deaminase [Stenotrophomonas sp. SKA14]
 gi|219719172|gb|EED37697.1| cytosine deaminase [Stenotrophomonas sp. SKA14]
          Length = 150

 Score = 39.3 bits (90), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 31/120 (25%), Positives = 48/120 (40%), Gaps = 8/120 (6%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNN-KIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
            +  A+ EA+       +P+GA    N+ +++    NR  +  D + H E  A R   R 
Sbjct: 10  LLQTAIAEARQGLAEGGVPIGAALYHNDGRLLGCGHNRRVQEGDPSVHGETDAFRKAGR- 68

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI----ENGTQFYTLAT 121
             Q    +  +  TL PC  C+  +    I  +  G S    GGI    ENG     L +
Sbjct: 69  --QRRYQDTIMVTTLAPCWYCSGLVRQFNIGTVVVGESRTFQGGIAWLRENGVNVIDLDS 126


>gi|195379983|ref|XP_002048750.1| GJ21218 [Drosophila virilis]
 gi|194143547|gb|EDW59943.1| GJ21218 [Drosophila virilis]
          Length = 358

 Score = 39.3 bits (90), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 15/55 (27%), Positives = 31/55 (56%), Gaps = 1/55 (1%)

Query: 75  DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIY 129
           D+Y+  EPC MCA A+  +R++R+++       G +    Q +++   +H  E++
Sbjct: 301 DVYLLREPCLMCAMALVHSRVKRIFF-LEQSDDGALATSFQLHSVKELNHHYEVF 354


>gi|323720752|gb|EGB29824.1| deaminase [Mycobacterium tuberculosis CDC1551A]
          Length = 159

 Score = 39.3 bits (90), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 21/48 (43%), Positives = 24/48 (50%)

Query: 43 RNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAI 90
          R  +  D TAHAE LAIR  C  L  E L    L V   PC MC  ++
Sbjct: 29 RWAQTNDPTAHAESLAIRAACTKLGTEHLVGTTLNVLAHPCPMCYGSL 76


>gi|302751598|gb|ADL65775.1| bifunctional pyrimidine reductase / riboflavin biosynthesis protein
           [Staphylococcus aureus subsp. aureus str. JKD6008]
          Length = 343

 Score = 39.3 bits (90), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 35/131 (26%), Positives = 58/131 (44%), Gaps = 24/131 (18%)

Query: 25  PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84
           PVGAV V   +I+    +    L+    HAE+ A+ M     +Q+      +Y+TLEPC+
Sbjct: 20  PVGAVIVKEGRIVGIGAH----LRKGDKHAEVQALDM-----AQQNAEGATIYITLEPCS 70

Query: 85  M------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH-HSPEIYPGISEQRS 137
                  C   I   +I ++ Y          +N    +   T   H  E+   + ++R+
Sbjct: 71  HFGSTPPCVNKIIDCKIAKVVYATK-------DNSLDTHGDETLRAHGIEV-ECVDDERA 122

Query: 138 RQIIQDFFKER 148
            Q+ QDFFK +
Sbjct: 123 SQLYQDFFKAK 133


>gi|195584645|ref|XP_002082115.1| GD11395 [Drosophila simulans]
 gi|194194124|gb|EDX07700.1| GD11395 [Drosophila simulans]
          Length = 360

 Score = 39.3 bits (90), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 27/104 (25%), Positives = 54/104 (51%), Gaps = 12/104 (11%)

Query: 31  VLNN---KIISRAGNRNRELKDVTAH--AEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85
           ++NN   K ++    ++RE K+V A   A+ LA + G  + +       D+Y+  EPC M
Sbjct: 253 LMNNEDYKDLTFGAEKSRECKEVNADQGADNLA-KFGPYLCTG-----YDIYLLQEPCLM 306

Query: 86  CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIY 129
           C+ A+  +R +R+++   N   G +    Q +++   +H  E++
Sbjct: 307 CSMALVHSRAKRVFF-VKNSDNGALATRFQLHSVRELNHHYEVF 349


>gi|145500018|ref|XP_001435993.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124403130|emb|CAK68596.1| unnamed protein product [Paramecium tetraurelia]
          Length = 256

 Score = 39.3 bits (90), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 19/59 (32%), Positives = 27/59 (45%)

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           SQ    E+ L    EPC MCA A+  +RI  +YY       GG+ +  Q   +   +H 
Sbjct: 191 SQYYAREMTLVTYFEPCIMCAMALIHSRINEVYYYQKRVTDGGLNDQLQVNNMKQLNHK 249


>gi|329964682|ref|ZP_08301736.1| riboflavin biosynthesis protein RibD [Bacteroides fluxus YIT 12057]
 gi|328525082|gb|EGF52134.1| riboflavin biosynthesis protein RibD [Bacteroides fluxus YIT 12057]
          Length = 349

 Score = 38.9 bits (89), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 44/148 (29%), Positives = 66/148 (44%), Gaps = 21/148 (14%)

Query: 7   FMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
           +M   ++ AQN  L N  P   VGAV V + KII         ++   AHAE+ AIR   
Sbjct: 7   YMRRCIQLAQNG-LCNAAPNPMVGAVIVCDGKIIGEG----YHIRCGEAHAEVNAIR--- 58

Query: 64  RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFY 117
            +    +L +  +YV+LEPC+       CA  I   +I R+  G  +P       G Q  
Sbjct: 59  SVKEPALLKKSTIYVSLEPCSHYGKTPPCADLIIEKQIPRIVIGCRDPFSKVAGRGIQKL 118

Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDFF 145
             A      E+  G+ E+  + +I+ F 
Sbjct: 119 KDA----GREVIVGVLEEECKSLIRRFI 142


>gi|209809706|ref|YP_002265245.1| putative cytidine and deoxycytidylate deaminase [Aliivibrio
           salmonicida LFI1238]
 gi|21311445|gb|AAM46726.1|AF452135_11 RibG [Aliivibrio salmonicida]
 gi|208011269|emb|CAQ81710.1| putative cytidine and deoxycytidylate deaminase [Aliivibrio
           salmonicida LFI1238]
          Length = 147

 Score = 38.9 bits (89), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 30/87 (34%), Positives = 43/87 (49%), Gaps = 18/87 (20%)

Query: 26  VGAVAVLNNKIIS------------RAGNRNRELKDV-TAHAEILAIRMGCRILSQEILP 72
           VGAV   +N+I+S             A   +RELK + T HAE  AI     + ++  L 
Sbjct: 27  VGAVITKHNRIVSVGFNGYPHGVSDSADTDDRELKYLKTLHAEENAI-----LFAKRDLE 81

Query: 73  EVDLYVTLEPCTMCAAAISLARIRRLY 99
           + D++VT  PC  CAA I    I ++Y
Sbjct: 82  DCDIWVTHFPCPNCAAKIIQTGISKVY 108


>gi|325000060|ref|ZP_08121172.1| cytosine/adenosine deaminase [Pseudonocardia sp. P1]
          Length = 158

 Score = 38.9 bits (89), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 30/104 (28%), Positives = 49/104 (47%), Gaps = 2/104 (1%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELK-DVTAHAEILAIR 60
           ++  V +   +E A+ A    + P G+V V  + ++ RA +RNR    D T H E    R
Sbjct: 3   EQDRVHLRRCVELAEQALGAGDEPFGSVLVDASGVV-RAEDRNRVAGGDPTRHPEFELAR 61

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASN 104
               +L+        +Y + E C MCAAA +   + R+ Y +S 
Sbjct: 62  RATELLTPGERAGATVYTSGEHCPMCAAAHAWVGLGRIVYASST 105


>gi|260889069|ref|ZP_05900332.1| riboflavin biosynthesis protein RibD [Leptotrichia hofstadii F0254]
 gi|260861129|gb|EEX75629.1| riboflavin biosynthesis protein RibD [Leptotrichia hofstadii F0254]
          Length = 371

 Score = 38.9 bits (89), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 43/148 (29%), Positives = 65/148 (43%), Gaps = 18/148 (12%)

Query: 7   FMSCALEEAQNAA-LRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           +M  A+E A+  A   N  P VGAV V   K+I    ++         HAE+ A+    +
Sbjct: 9   YMRMAIELAKKGAGPVNPNPMVGAVVVQGGKVIGTGYHKYFG----EPHAEVYALDEASK 64

Query: 65  ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
             + + L +  +YVTLEPC+       CA  I    ++R   G+S+P       G Q   
Sbjct: 65  --NSKDLSDATIYVTLEPCSHYGKTPPCAEKIVKLGLKRCVIGSSDPNPKVAGKGIQILK 122

Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFK 146
            A      E+   I ++   +I Q FFK
Sbjct: 123 NAGI----EVTENILKEECDKINQVFFK 146


>gi|330504323|ref|YP_004381192.1| CMP/dCMP deaminase, zinc-binding protein [Pseudomonas mendocina
           NK-01]
 gi|328918609|gb|AEB59440.1| CMP/dCMP deaminase, zinc-binding protein [Pseudomonas mendocina
           NK-01]
          Length = 184

 Score = 38.9 bits (89), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 21/42 (50%), Positives = 25/42 (59%), Gaps = 5/42 (11%)

Query: 72  PEVD-----LYVTLEPCTMCAAAISLARIRRLYYGASNPKGG 108
           P+VD     LYV+LEPC MC   I LA I R+ Y A +  GG
Sbjct: 84  PQVDRRGLTLYVSLEPCLMCYGRILLAGITRVRYLARDRDGG 125


>gi|297538271|ref|YP_003674040.1| riboflavin biosynthesis protein RibD [Methylotenera sp. 301]
 gi|297257618|gb|ADI29463.1| riboflavin biosynthesis protein RibD [Methylotenera sp. 301]
          Length = 370

 Score = 38.9 bits (89), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 43/151 (28%), Positives = 63/151 (41%), Gaps = 25/151 (16%)

Query: 5   NVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR- 60
           + +M+ AL  A+   L    P   VG V V NN+I+ +  +    LK    HAE+ A+R 
Sbjct: 7   HTYMTLALRLAERG-LYTTQPNPRVGCVIVKNNQIVGQGAH----LKAGEPHAEVFALRE 61

Query: 61  MGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGT 114
            G            D YVTLEPC        C  A+  AR++R+     +P      NG 
Sbjct: 62  AGANAEG------ADAYVTLEPCNHHGRTPPCVDALINARVKRVVVAMQDPNPLVAGNGI 115

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
           +        H  E+  G+ E  S+ +   F 
Sbjct: 116 KRLQA----HGIEVEVGLMEAESKSLNLGFI 142


>gi|257467357|ref|ZP_05631668.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Fusobacterium
           gonidiaformans ATCC 25563]
 gi|315918487|ref|ZP_07914727.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase
           [Fusobacterium gonidiaformans ATCC 25563]
 gi|313692362|gb|EFS29197.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase
           [Fusobacterium gonidiaformans ATCC 25563]
          Length = 359

 Score = 38.9 bits (89), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 39/113 (34%), Positives = 53/113 (46%), Gaps = 19/113 (16%)

Query: 7   FMSCALEEAQNAALR-NEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           +M  ALE A++   R N  P VGAV V N KII +  +          HAE+ A++    
Sbjct: 6   YMHLALELAKHGEGRVNPNPLVGAVVVKNGKIIGKGYHHEYG----GPHAEVFALQE--- 58

Query: 65  ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRR--LYYGASNPKGGG 109
             + E      +YVTLEPC+       CA  I  + I+R  +  G  NP  GG
Sbjct: 59  --AGEEAKGATIYVTLEPCSHYGKTPPCAKKIIDSGIKRCVISMGDPNPLVGG 109


>gi|149179738|ref|ZP_01858243.1| riboflavin biosynthesis protein RibD [Bacillus sp. SG-1]
 gi|148851930|gb|EDL66075.1| riboflavin biosynthesis protein RibD [Bacillus sp. SG-1]
          Length = 363

 Score = 38.9 bits (89), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 35/126 (27%), Positives = 53/126 (42%), Gaps = 19/126 (15%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85
           VGAV V + +I+    +    LK    HAE+ AIR              D+YVTLEPC  
Sbjct: 27  VGAVVVKDGEIVGMGAH----LKAGDPHAEVHAIRQAGSKAEG-----ADIYVTLEPCAH 77

Query: 86  ------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139
                 CA  I   +++R++  + +P       G      A      E+  GI E+ + +
Sbjct: 78  TGKTPPCANLIVENKLKRVFIASVDPNPLVAGKGIDILERAGI----EVVTGICEKEALE 133

Query: 140 IIQDFF 145
           +   FF
Sbjct: 134 LNAHFF 139


>gi|156096476|ref|XP_001614272.1| hypothetical protein [Plasmodium vivax SaI-1]
 gi|148803146|gb|EDL44545.1| hypothetical protein, conserved [Plasmodium vivax]
          Length = 245

 Score = 38.9 bits (89), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 21/71 (29%), Positives = 34/71 (47%)

Query: 76  LYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQ 135
           + VT EPC MC  A+ L  I+ +Y+   N + GG  +    +      +   I  G   +
Sbjct: 159 IVVTCEPCIMCVYALKLMGIKDIYFCCLNERFGGCGSVLSLHKTYQDINVNYIKTGGCTE 218

Query: 136 RSRQIIQDFFK 146
           RS  ++Q F+K
Sbjct: 219 RSISLMQSFYK 229


>gi|189425488|ref|YP_001952665.1| CMP/dCMP deaminase zinc-binding [Geobacter lovleyi SZ]
 gi|189421747|gb|ACD96145.1| CMP/dCMP deaminase zinc-binding [Geobacter lovleyi SZ]
          Length = 194

 Score = 38.9 bits (89), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 29/91 (31%), Positives = 37/91 (40%), Gaps = 3/91 (3%)

Query: 11  ALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEI 70
           A E A+ A   +  P GAV V  +         N  L D   HAE +  R        + 
Sbjct: 51  ANEAAKEAMKSDHPPFGAVLVAPDGETVLMKQGNVSLMD---HAETVIARQAFVKYDPDY 107

Query: 71  LPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
           L +  L   +EPC MCA  I  A I  + YG
Sbjct: 108 LWKCTLVTNVEPCAMCAGNIYWANIGNVVYG 138


>gi|317474402|ref|ZP_07933676.1| riboflavin biosynthesis protein RibD [Bacteroides eggerthii
           1_2_48FAA]
 gi|316909083|gb|EFV30763.1| riboflavin biosynthesis protein RibD [Bacteroides eggerthii
           1_2_48FAA]
          Length = 347

 Score = 38.9 bits (89), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 44/147 (29%), Positives = 64/147 (43%), Gaps = 21/147 (14%)

Query: 7   FMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
           +M   ++ AQN  L N  P   VGAV V + KII         ++   AHAE+ AIR   
Sbjct: 6   YMRRCIQLAQNG-LCNTAPNPMVGAVIVCDGKIIGEG----YHIRCGEAHAEVNAIR--- 57

Query: 64  RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFY 117
            +    +L    +YV+LEPC        CA  I   +I R+  G  +P       G Q  
Sbjct: 58  SVKEPSLLKRSTIYVSLEPCAHYGKTPPCADLIIEKQIPRIVIGCQDPFAKVAGRGIQKL 117

Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDF 144
             A      E+  G+ E+  + +I+ F
Sbjct: 118 KDA----GREVIVGVLEEDCKNLIRRF 140


>gi|304440657|ref|ZP_07400541.1| riboflavin biosynthesis protein RibD [Peptoniphilus duerdenii ATCC
           BAA-1640]
 gi|304370844|gb|EFM24466.1| riboflavin biosynthesis protein RibD [Peptoniphilus duerdenii ATCC
           BAA-1640]
          Length = 368

 Score = 38.9 bits (89), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 42/117 (35%), Positives = 52/117 (44%), Gaps = 18/117 (15%)

Query: 7   FMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           FMS A+E A+N   A +    VG V V N KII    ++       + HAE+ AI     
Sbjct: 9   FMSRAIELAKNGIGATKTNPLVGCVIVRNEKIIGEGYHKVFG----SCHAEVNAINDAK- 63

Query: 65  ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP----KGGGIE 111
               E L    LYV LEPC+       CA  I   RI R+  G  +P     G GIE
Sbjct: 64  -AKGENLDGATLYVNLEPCSHYGKTPPCADRIIEERITRVVIGNCDPFEKVSGRGIE 119


>gi|45199011|ref|NP_986040.1| AFR493Cp [Ashbya gossypii ATCC 10895]
 gi|44985086|gb|AAS53864.1| AFR493Cp [Ashbya gossypii ATCC 10895]
          Length = 324

 Score = 38.9 bits (89), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 7/55 (12%)

Query: 73  EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI--ENGTQFYTLATCHHS 125
           + D+Y T EPC+MCA A+  +RI+R  +    P+ G +  E+G  +     C HS
Sbjct: 246 DFDVYTTHEPCSMCAMALIHSRIKRCIFIQPMPETGALRPESGDGY-----CMHS 295


>gi|255020757|ref|ZP_05292816.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase /
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Acidithiobacillus caldus ATCC 51756]
 gi|254969819|gb|EET27322.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase /
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Acidithiobacillus caldus ATCC 51756]
          Length = 369

 Score = 38.9 bits (89), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 32/95 (33%), Positives = 45/95 (47%), Gaps = 19/95 (20%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC-- 83
           VGAV V + +I+ R  +    L+   AHAE+ A+       + E      LYVTLEPC  
Sbjct: 21  VGAVVVRDGQIVGRGAH----LRAGDAHAEVFALAQ-----AGERARGATLYVTLEPCCH 71

Query: 84  ----TMCAAAISLARIRRLYYGASNP----KGGGI 110
                 C  AI  A + R+    ++P    +GGGI
Sbjct: 72  HGRTPPCTDAILTAGVARVVIAIADPNPRVRGGGI 106


>gi|253732422|ref|ZP_04866587.1| riboflavin specific deaminase [Staphylococcus aureus subsp. aureus
           USA300_TCH959]
 gi|253723812|gb|EES92541.1| riboflavin specific deaminase [Staphylococcus aureus subsp. aureus
           USA300_TCH959]
          Length = 357

 Score = 38.9 bits (89), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 37/150 (24%), Positives = 63/150 (42%), Gaps = 24/150 (16%)

Query: 7   FMSCALEEAQNAALRNEI--PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           FM  A++ A     +  +  PVGAV V   +I+    +    L+    HAE+ A+ M   
Sbjct: 14  FMDYAIQLANMVQGQTGVNPPVGAVVVKEGRIVGIGAH----LRKGDKHAEVQALDM--- 66

Query: 65  ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
             +Q+      +Y+TLEPC+       C   I   +I ++ Y          +N    + 
Sbjct: 67  --AQQNAEGATIYITLEPCSHFGSTPPCVNKIIDCKITKVVYATK-------DNSLDTHG 117

Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKER 148
             T          + ++R+ Q+ QDFFK +
Sbjct: 118 DETLRAQGIEVECVDDERALQLYQDFFKAK 147


>gi|282883344|ref|ZP_06291938.1| riboflavin biosynthesis protein RibD [Peptoniphilus lacrimalis
           315-B]
 gi|281296848|gb|EFA89350.1| riboflavin biosynthesis protein RibD [Peptoniphilus lacrimalis
           315-B]
          Length = 372

 Score = 38.9 bits (89), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 44/152 (28%), Positives = 71/152 (46%), Gaps = 28/152 (18%)

Query: 7   FMSCAL---EEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
           +MS A+   E+ +   L N + VG V V +++II R    +++  D+  HAE +AI    
Sbjct: 10  YMSLAMDLAEKGKGFTLTNPM-VGCVIVNDDRIIGRG--YHKKFGDL--HAETMAIEDAQ 64

Query: 64  RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP----KGGGIENG 113
           +  + E L    LYV LEPC        C  AI   +I+++     +P     G GI+  
Sbjct: 65  K--NGESLEGSTLYVNLEPCCHYGKQPPCTKAIIENKIKKVVIANVDPNKKVSGKGIK-- 120

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
               TL       E+  GI E+   ++ ++FF
Sbjct: 121 ----TLEDA--GIEVVEGIMEEEGLKLNEEFF 146


>gi|66824069|ref|XP_645389.1| hypothetical protein DDB_G0272030 [Dictyostelium discoideum AX4]
 gi|60473505|gb|EAL71449.1| hypothetical protein DDB_G0272030 [Dictyostelium discoideum AX4]
          Length = 225

 Score = 38.9 bits (89), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 2/51 (3%)

Query: 53  HAEILAIRMGCRILSQEILPE-VDLYVTLEPCTMCAAAISLARIRRLYYGA 102
           H E+ AI M C  + Q+   E   LY T EPC MC+AAI   + +++ + +
Sbjct: 95  HGEVKAI-MNCTTMYQQATWEDYSLYTTGEPCPMCSAAIMWTKFQKVIFAS 144


>gi|118468256|ref|YP_888948.1| cytosine deaminase [Mycobacterium smegmatis str. MC2 155]
 gi|118169543|gb|ABK70439.1| cytosine deaminase [Mycobacterium smegmatis str. MC2 155]
          Length = 146

 Score = 38.9 bits (89), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 29/106 (27%), Positives = 44/106 (41%), Gaps = 4/106 (3%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
            +  A+EEA+       IP+GA     + +++    NR  +  D + HAE  A R   R 
Sbjct: 6   MLDVAVEEARKGLSEGGIPIGAALFSADGELLGSGHNRRVQDGDPSIHAETDAFRAAGR- 64

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIE 111
             Q    +  +  TL PC  C+  +    I  L  G +    GG E
Sbjct: 65  --QRGYRKTIMVTTLSPCWYCSGLVRQFNIGALVIGEARTFSGGHE 108


>gi|19922544|ref|NP_611345.1| CG10927 [Drosophila melanogaster]
 gi|7302591|gb|AAF57672.1| CG10927 [Drosophila melanogaster]
 gi|17862074|gb|AAL39514.1| LD07624p [Drosophila melanogaster]
 gi|220942946|gb|ACL84016.1| CG10927-PA [synthetic construct]
 gi|220953166|gb|ACL89126.1| CG10927-PA [synthetic construct]
          Length = 360

 Score = 38.9 bits (89), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 15/55 (27%), Positives = 32/55 (58%), Gaps = 1/55 (1%)

Query: 75  DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIY 129
           D+Y+  EPC MC+ A+  +R +R+++   N + G +    Q +++   +H  E++
Sbjct: 296 DIYLLQEPCLMCSMALVHSRAKRVFF-VKNSENGALATRFQLHSVRELNHHYEVF 349


>gi|195027988|ref|XP_001986864.1| GH20299 [Drosophila grimshawi]
 gi|193902864|gb|EDW01731.1| GH20299 [Drosophila grimshawi]
          Length = 356

 Score = 38.9 bits (89), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 16/55 (29%), Positives = 33/55 (60%), Gaps = 1/55 (1%)

Query: 75  DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIY 129
           D+Y+  EPC MCA A+  +R+RR+++   + + G + +  Q + +   +H  E++
Sbjct: 298 DVYLLREPCLMCAMALVHSRVRRIFFLELS-RNGALASTFQLHAVKELNHHYEVF 351


>gi|218131999|ref|ZP_03460803.1| hypothetical protein BACEGG_03622 [Bacteroides eggerthii DSM 20697]
 gi|217985875|gb|EEC52215.1| hypothetical protein BACEGG_03622 [Bacteroides eggerthii DSM 20697]
          Length = 347

 Score = 38.9 bits (89), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 44/147 (29%), Positives = 64/147 (43%), Gaps = 21/147 (14%)

Query: 7   FMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
           +M   ++ AQN  L N  P   VGAV V + KII         ++   AHAE+ AIR   
Sbjct: 6   YMRRCIQLAQNG-LCNTAPNPMVGAVIVCDGKIIGEG----YHIRCGEAHAEVNAIR--- 57

Query: 64  RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFY 117
            +    +L    +YV+LEPC        CA  I   +I R+  G  +P       G Q  
Sbjct: 58  SVKEPSLLKRSTIYVSLEPCAHYGKTPPCADLIIEKQIPRIVIGCQDPFAKVAGRGIQKL 117

Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDF 144
             A      E+  G+ E+  + +I+ F
Sbjct: 118 KDA----GREVIVGVLEEDCKNLIRRF 140


>gi|222085898|ref|YP_002544429.1| deoxycytidylate deaminase family protein [Agrobacterium radiobacter
           K84]
 gi|221723346|gb|ACM26502.1| deoxycytidylate deaminase family protein [Agrobacterium radiobacter
           K84]
          Length = 195

 Score = 38.9 bits (89), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 19/61 (31%), Positives = 31/61 (50%)

Query: 44  NRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
           N EL++   H E+ A++    +  +    ++    T EPCTMC +AI+ A     YY  S
Sbjct: 51  NNELENPLWHGEVHALKRFYELGDRPATKDLIFLSTHEPCTMCMSAITWAGFDNFYYFFS 110

Query: 104 N 104
           +
Sbjct: 111 H 111


>gi|108805629|ref|YP_645566.1| CMP/dCMP deaminase [Rubrobacter xylanophilus DSM 9941]
 gi|108766872|gb|ABG05754.1| CMP/dCMP deaminase, zinc-binding protein [Rubrobacter xylanophilus
           DSM 9941]
          Length = 194

 Score = 38.9 bits (89), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 21/59 (35%), Positives = 30/59 (50%), Gaps = 5/59 (8%)

Query: 51  TAHAEILAIRMGCRILSQEIL-----PEVDLYVTLEPCTMCAAAISLARIRRLYYGASN 104
            AHAE++AI +  R L    L     P   L+ + EPC MC  A + + +R L  GA +
Sbjct: 78  VAHAEVVAIMVAQRSLGHFDLGGPGMPRYQLFASTEPCAMCFGATTWSGVRSLVCGARD 136


>gi|77413098|ref|ZP_00789299.1| riboflavin biosynthesis protein RibD [Streptococcus agalactiae 515]
 gi|77160891|gb|EAO72001.1| riboflavin biosynthesis protein RibD [Streptococcus agalactiae 515]
          Length = 369

 Score = 38.9 bits (89), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 35/113 (30%), Positives = 57/113 (50%), Gaps = 17/113 (15%)

Query: 1   MKKGNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           M K   +M+ AL+EA+     +     VGAV V +++IIS+    ++   D+  HAE  A
Sbjct: 1   MMKKEDYMALALKEAEKGMGFVAPNPLVGAVIVKDDRIISKG--YHKRFGDL--HAERQA 56

Query: 59  IRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP 105
           I+      + E +    LYVTLEPC        C  A+  + I+++  G+ +P
Sbjct: 57  IKN-----ADEDISGSTLYVTLEPCCHVGKQPPCTEALIKSGIKKVVVGSLDP 104


>gi|22536910|ref|NP_687761.1| riboflavin biosynthesis protein RibD [Streptococcus agalactiae
           2603V/R]
 gi|76788660|ref|YP_329494.1| riboflavin biosynthesis protein RibD [Streptococcus agalactiae
           A909]
 gi|77406006|ref|ZP_00783084.1| riboflavin biosynthesis protein RibD [Streptococcus agalactiae
           H36B]
 gi|22533761|gb|AAM99633.1|AE014225_16 riboflavin biosynthesis protein RibD [Streptococcus agalactiae
           2603V/R]
 gi|76563717|gb|ABA46301.1| riboflavin biosynthesis protein RibD [Streptococcus agalactiae
           A909]
 gi|77175401|gb|EAO78192.1| riboflavin biosynthesis protein RibD [Streptococcus agalactiae
           H36B]
          Length = 369

 Score = 38.9 bits (89), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 35/113 (30%), Positives = 57/113 (50%), Gaps = 17/113 (15%)

Query: 1   MKKGNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           M K   +M+ AL+EA+     +     VGAV V +++IIS+    ++   D+  HAE  A
Sbjct: 1   MMKKEDYMALALKEAEKGMGFVAPNPLVGAVIVKDDRIISKG--YHKRFGDL--HAERQA 56

Query: 59  IRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP 105
           I+      + E +    LYVTLEPC        C  A+  + I+++  G+ +P
Sbjct: 57  IKN-----ADEDISGSTLYVTLEPCCHVGKQPPCTEALIKSGIKKVVVGSLDP 104


>gi|258415855|ref|ZP_05682126.1| riboflavin specific deaminase [Staphylococcus aureus A9763]
 gi|257839448|gb|EEV63921.1| riboflavin specific deaminase [Staphylococcus aureus A9763]
          Length = 347

 Score = 38.9 bits (89), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 40/151 (26%), Positives = 69/151 (45%), Gaps = 26/151 (17%)

Query: 7   FMSCALEEAQNAALRNEI--PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           FM  A++ A     +  +  PVGAV V   +I+    +    L+    HAE+ A+ M   
Sbjct: 4   FMDYAIQLANMVQGQTGVNPPVGAVVVNEGRIVGIGAH----LRKGDKHAEVQALDM--- 56

Query: 65  ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIE-NGTQFY 117
             +Q+      +Y+TLEPC+       C   I   +I ++ Y     K   ++ +G +  
Sbjct: 57  --AQQNAEGATIYITLEPCSHFGSTPPCVNKIIDCKIAKVVYAT---KDNSLDTHGDE-- 109

Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDFFKER 148
             A   H  E+   + ++R+ Q+ QDFFK +
Sbjct: 110 --ALRAHGIEV-ECVDDERASQLYQDFFKAK 137


>gi|329733229|gb|EGG69566.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp.
           aureus 21193]
          Length = 347

 Score = 38.9 bits (89), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 37/150 (24%), Positives = 63/150 (42%), Gaps = 24/150 (16%)

Query: 7   FMSCALEEAQNAALRNEI--PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           FM  A++ A     +  +  PVGAV V   +I+    +    L+    HAE+ A+ M   
Sbjct: 4   FMDYAIQLANMVQGQTGVNPPVGAVVVKEGRIVGIGAH----LRKGDKHAEVQALDM--- 56

Query: 65  ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
             +Q+      +Y+TLEPC+       C   I   +I ++ Y          +N    + 
Sbjct: 57  --AQQNAEGATIYITLEPCSHFGSTPPCVNKIIDCKITKVVYATK-------DNSLDTHG 107

Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKER 148
             T          + ++R+ Q+ QDFFK +
Sbjct: 108 DETLRAQGIEVECVDDERALQLYQDFFKAK 137


>gi|299142094|ref|ZP_07035228.1| riboflavin biosynthesis protein RibD [Prevotella oris C735]
 gi|298576556|gb|EFI48428.1| riboflavin biosynthesis protein RibD [Prevotella oris C735]
          Length = 122

 Score = 38.5 bits (88), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 37/118 (31%), Positives = 57/118 (48%), Gaps = 19/118 (16%)

Query: 7   FMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
           +M   L+ A+N   +N  P   VGAV V +++II         ++    HAE+ A     
Sbjct: 6   YMKRCLQLAENGR-QNAKPNPMVGAVIVAHDRIIGEG----YHVRCGEGHAEVNAF-ASV 59

Query: 64  RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP----KGGGIE 111
           R   +++LPE  +YV+LEPC+       CA  I    I+R   G  +P    +G GI+
Sbjct: 60  RPEDEKLLPEATIYVSLEPCSHYGKTPPCADLIISKGIKRCVCGCVDPFAKVQGRGIQ 117


>gi|288818291|ref|YP_003432639.1| riboflavin biosynthesis protein [Hydrogenobacter thermophilus TK-6]
 gi|288787691|dbj|BAI69438.1| riboflavin biosynthesis protein [Hydrogenobacter thermophilus TK-6]
 gi|308751888|gb|ADO45371.1| riboflavin biosynthesis protein RibD [Hydrogenobacter thermophilus
           TK-6]
          Length = 361

 Score = 38.5 bits (88), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 44/148 (29%), Positives = 66/148 (44%), Gaps = 23/148 (15%)

Query: 7   FMSCALEEAQ-NAALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI-RMGC 63
           FM  ALE A+    L +  P VG V V + KII+   +    +     HAE +A+ + G 
Sbjct: 9   FMRRALELAKLRKGLTHPNPTVGCVIVKDGKIIAEGYHEKVGM----PHAEAVALEKAGT 64

Query: 64  RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFY 117
           +           LYVTLEPCT       C  AI  A+++R+     +P       G Q  
Sbjct: 65  QAEGST------LYVTLEPCTHYGRTPPCTDAIIRAKVKRVVIATLDPNPLVSGRGVQKL 118

Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDFF 145
             A      ++  G+ E  +R++ +DFF
Sbjct: 119 RDAGI----DVCVGVLEDEARELNEDFF 142


>gi|25010822|ref|NP_735217.1| riboflavin biosynthesis protein RibD [Streptococcus agalactiae
           NEM316]
 gi|23095201|emb|CAD46411.1| Unknown [Streptococcus agalactiae NEM316]
          Length = 369

 Score = 38.5 bits (88), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 35/113 (30%), Positives = 57/113 (50%), Gaps = 17/113 (15%)

Query: 1   MKKGNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           M K   +M+ AL+EA+     +     VGAV V +++IIS+    ++   D+  HAE  A
Sbjct: 1   MMKKEDYMALALKEAEKGMGFVAPNPLVGAVIVKDDRIISKG--YHKRFGDL--HAERQA 56

Query: 59  IRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP 105
           I+      + E +    LYVTLEPC        C  A+  + I+++  G+ +P
Sbjct: 57  IKN-----ADEDISGSTLYVTLEPCCHVGKQPPCTEALIKSGIKKVVVGSLDP 104


>gi|312830146|emb|CBX34988.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp.
           aureus ECT-R 2]
          Length = 347

 Score = 38.5 bits (88), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 39/151 (25%), Positives = 65/151 (43%), Gaps = 26/151 (17%)

Query: 7   FMSCALEEAQNAALRNEI--PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           FM  A++ A     +  +  PVGAV V   +I+    +    L+    HAE+ A+ M   
Sbjct: 4   FMDYAIQLANMVQGQTGVNPPVGAVVVNEGRIVGIGAH----LRKGDKHAEVQALDM--- 56

Query: 65  ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
              Q+      +Y+TLEPC+       C   I   +I ++ Y          +N    + 
Sbjct: 57  --VQQNAEGATIYITLEPCSHFGSTPPCVNKIIDCKIAKVVYATK-------DNSLDTHG 107

Query: 119 LATCH-HSPEIYPGISEQRSRQIIQDFFKER 148
             T   H  E+   + ++R+ Q+ QDFFK +
Sbjct: 108 DETLRAHGIEV-ECVDDERASQLYQDFFKAK 137


>gi|229174066|ref|ZP_04301602.1| Riboflavin biosynthesis protein [Bacillus cereus MM3]
 gi|228609398|gb|EEK66684.1| Riboflavin biosynthesis protein [Bacillus cereus MM3]
          Length = 350

 Score = 38.5 bits (88), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 38/127 (29%), Positives = 61/127 (48%), Gaps = 19/127 (14%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85
           VG+V V +N+I+    +    +K    HAEI AIRM     + E      +YVTLEPC+ 
Sbjct: 11  VGSVIVNDNRIVGIGAH----MKAGEPHAEIHAIRM-----AGEQARGGTIYVTLEPCSH 61

Query: 86  ------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139
                 CA AI  A I+++     +P    + +G+    L       E+  G+ E+ S++
Sbjct: 62  HGRTGPCAEAIVQAGIKKVVVATLDPN--PLVSGSGIKILQDA--GIEVLVGVCEEESKK 117

Query: 140 IIQDFFK 146
           + + F K
Sbjct: 118 MNEVFNK 124


>gi|3378525|emb|CAA08869.1| riboflavin-specific deaminase [Thermotoga neapolitana]
          Length = 241

 Score = 38.5 bits (88), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 40/117 (34%), Positives = 51/117 (43%), Gaps = 16/117 (13%)

Query: 7   FMSCALEEAQNAALR--NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           FM  A+E A+    R     PVGAV V   +IIS   +    L  V  HAE +AI    R
Sbjct: 5   FMKRAIELAKKGLGRVNPNPPVGAVVVKEGRIISEGFH---PLFLVGPHAERVAIESAKR 61

Query: 65  ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP---KGGGIEN 112
               E L    L VTLEPC        C   I  + I+++  G  +P    G G+E 
Sbjct: 62  --KGEDLTGTTLVVTLEPCDHHGKTPPCTDLIIESGIKKVVIGMRDPNPVSGSGVEK 116


>gi|254495519|ref|ZP_05108443.1| riboflavin biosynthesis protein RibD [Polaribacter sp. MED152]
 gi|85819875|gb|EAQ41032.1| riboflavin biosynthesis protein RibD [Polaribacter sp. MED152]
          Length = 337

 Score = 38.5 bits (88), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 31/96 (32%), Positives = 45/96 (46%), Gaps = 17/96 (17%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85
           VGAV V  NKII+     N        HAE+ AI     +  + +L E  +YVTLEPC+ 
Sbjct: 17  VGAVIVHQNKIIAEGFTSNYG----GNHAEVNAI---IAVKDKSLLKEATIYVTLEPCSH 69

Query: 86  ------CAAAISLARIRRLYYGASNPK----GGGIE 111
                 CA  I   +++++  G  +      G G+E
Sbjct: 70  YGKTPPCADLIIKHKLKKVVIGTLDTNSLVAGKGVE 105


>gi|77410804|ref|ZP_00787162.1| riboflavin biosynthesis protein RibD [Streptococcus agalactiae
           CJB111]
 gi|77163183|gb|EAO74136.1| riboflavin biosynthesis protein RibD [Streptococcus agalactiae
           CJB111]
          Length = 369

 Score = 38.5 bits (88), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 35/113 (30%), Positives = 57/113 (50%), Gaps = 17/113 (15%)

Query: 1   MKKGNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           M K   +M+ AL+EA+     +     VGAV V +++IIS+    ++   D+  HAE  A
Sbjct: 1   MMKKEDYMALALKEAEKGMGFVAPNPLVGAVIVKDDRIISKG--YHKRFGDL--HAERQA 56

Query: 59  IRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP 105
           I+      + E +    LYVTLEPC        C  A+  + I+++  G+ +P
Sbjct: 57  IKN-----ADEDISGSTLYVTLEPCCHVGKQPPCTEALIKSGIKKVVVGSLDP 104


>gi|223043509|ref|ZP_03613554.1| riboflavin biosynthesis protein RibD [Staphylococcus capitis SK14]
 gi|222442997|gb|EEE49097.1| riboflavin biosynthesis protein RibD [Staphylococcus capitis SK14]
          Length = 349

 Score = 38.5 bits (88), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 41/161 (25%), Positives = 65/161 (40%), Gaps = 44/161 (27%)

Query: 7   FMSCALEEAQNAALRNEI--PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           FM+ A++ A+    +  I  PVG+V V + +I+    +    LK    HAE+ A+ M   
Sbjct: 4   FMNYAIQLAKMVDGQTGINPPVGSVVVKDGRIVGLGAH----LKKGDKHAEVQALDMAG- 58

Query: 65  ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP----------KGG 108
               E   +  +YV+LEPCT       C   I    IR++ Y   +           K  
Sbjct: 59  ----EDAKDATIYVSLEPCTHHGSTPPCVNKIIEFGIRKVIYAVKDTTLASKGDEILKEA 114

Query: 109 GIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
           GIE   QF                  + + ++ +DFF  +R
Sbjct: 115 GIEVEFQF-----------------NENAAELYKDFFTAKR 138


>gi|187778552|ref|ZP_02995025.1| hypothetical protein CLOSPO_02147 [Clostridium sporogenes ATCC
           15579]
 gi|187772177|gb|EDU35979.1| hypothetical protein CLOSPO_02147 [Clostridium sporogenes ATCC
           15579]
          Length = 364

 Score = 38.5 bits (88), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 45/158 (28%), Positives = 71/158 (44%), Gaps = 29/158 (18%)

Query: 1   MKKGNVFMSCALEEAQNAALR-NEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           M+  N +M  AL+ A+    + N  P VGA+ + +NKII    ++         HAE+ A
Sbjct: 1   MEDYNFYMEKALKLAKKGEGKVNPNPKVGAIVIKDNKIIGEGYHKYFG----GPHAEVYA 56

Query: 59  IRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP----KGG 108
           +R      + E      +YVTLEPC+       CA AI  A I +      +P    +G 
Sbjct: 57  LRE-----AGEKAKGATIYVTLEPCSHYGKTPPCAKAIVKAGIAKAVIAMKDPNSLVQGR 111

Query: 109 GIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
           GI+   Q        +  E+   I E+ S+++ + F K
Sbjct: 112 GIDILKQ--------NGIEVVTDIMEKESKELNEVFIK 141


>gi|225685288|gb|EEH23572.1| predicted protein [Paracoccidioides brasiliensis Pb03]
          Length = 241

 Score = 38.5 bits (88), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 22/75 (29%), Positives = 34/75 (45%), Gaps = 13/75 (17%)

Query: 42  NRNRELKDVTAHAEILAIRMGCRILSQE-------------ILPEVDLYVTLEPCTMCAA 88
           N N +  + T+H EI AI    ++L+ +                E+ LY   E C+MC +
Sbjct: 92  NENSKTGNPTSHGEIAAITNCTKVLTDKSGRFKMTPSQTLNAFQELTLYSNAESCSMCTS 151

Query: 89  AISLARIRRLYYGAS 103
           AI  A  +   YG+S
Sbjct: 152 AIRWAGFKEYVYGSS 166


>gi|332881258|ref|ZP_08448908.1| riboflavin biosynthesis protein RibD [Capnocytophaga sp. oral taxon
           329 str. F0087]
 gi|332680634|gb|EGJ53581.1| riboflavin biosynthesis protein RibD [Capnocytophaga sp. oral taxon
           329 str. F0087]
          Length = 358

 Score = 38.5 bits (88), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 37/114 (32%), Positives = 54/114 (47%), Gaps = 17/114 (14%)

Query: 1   MKKGNVFMSCALEEAQNA---ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57
           M     +MS  ++ A+N    A  N + VGAV V + KII         ++    HAE+ 
Sbjct: 1   MTTDEKYMSRCIQLARNGFYGAAPNPM-VGAVIVHDGKII----GEGYHVRCGGPHAEVN 55

Query: 58  AIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP 105
           AIR    + + E+L E  +YV+LEPC+       CA  I    I R+  G  +P
Sbjct: 56  AIRF---VRNPELLKESTIYVSLEPCSHYGKTPPCADLIVEKGIPRVVVGCMDP 106


>gi|319744810|gb|EFV97150.1| riboflavin biosynthesis protein RibD [Streptococcus agalactiae ATCC
           13813]
          Length = 369

 Score = 38.5 bits (88), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 35/113 (30%), Positives = 57/113 (50%), Gaps = 17/113 (15%)

Query: 1   MKKGNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           M K   +M+ AL+EA+     +     VGAV V +++IIS+    ++   D+  HAE  A
Sbjct: 1   MMKKEDYMALALKEAEKGMGFVAPNPLVGAVIVKDDRIISKG--YHKRFGDL--HAERQA 56

Query: 59  IRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP 105
           I+      + E +    LYVTLEPC        C  A+  + I+++  G+ +P
Sbjct: 57  IKN-----ADEDISGSTLYVTLEPCCHVGKQPPCTEALIKSGIKKVVVGSLDP 104


>gi|293371696|ref|ZP_06618107.1| riboflavin biosynthesis protein RibD [Bacteroides ovatus SD CMC 3f]
 gi|292633393|gb|EFF51963.1| riboflavin biosynthesis protein RibD [Bacteroides ovatus SD CMC 3f]
          Length = 351

 Score = 38.5 bits (88), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 43/148 (29%), Positives = 67/148 (45%), Gaps = 21/148 (14%)

Query: 7   FMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
           +M   +E A+N  L N  P   VGAV V + +II    +    ++   AHAE+ AIR   
Sbjct: 12  YMKRCIELAKNG-LCNVSPNPMVGAVIVCDGRIIGEGYH----IRCGEAHAEVNAIR--- 63

Query: 64  RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFY 117
            +  + +L    +YV+LEPC+       CA  I   +I R+  G  +P       G Q  
Sbjct: 64  SVKDESLLKHSTIYVSLEPCSHYGKTPPCANLIIEKQIPRIVIGCQDPFSEVAGRGIQKL 123

Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDFF 145
             A      E+  G+ E+  + +I+ F 
Sbjct: 124 RDA----GREVTVGVLEEECKSLIRRFI 147


>gi|152976519|ref|YP_001376036.1| riboflavin biosynthesis protein RibD [Bacillus cereus subsp.
           cytotoxis NVH 391-98]
 gi|152025271|gb|ABS23041.1| riboflavin biosynthesis protein RibD [Bacillus cytotoxicus NVH
           391-98]
          Length = 370

 Score = 38.5 bits (88), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 45/151 (29%), Positives = 68/151 (45%), Gaps = 29/151 (19%)

Query: 7   FMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM-G 62
           +M  AL+ AQ+ A +   P   VGAV V N KI+    +    L+    HAE+ A+RM G
Sbjct: 6   YMKIALQLAQSTAGQTS-PNPMVGAVVVKNGKIVGMGAH----LRAGEEHAEVHALRMAG 60

Query: 63  CRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGA--SNPKGGGIENGT 114
                  +      YVTLEPC+       C   +   +++R+      SNP   G  NG 
Sbjct: 61  AHAKGATV------YVTLEPCSHFGKTPPCCNLLIQKKVKRVVIATLDSNPLVAG--NGK 112

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
           +    A  +    +  GI E+ +R + + FF
Sbjct: 113 KKLEEAGIY----VTTGILEEEARSLNRYFF 139


>gi|195119971|ref|XP_002004502.1| GI19969 [Drosophila mojavensis]
 gi|193909570|gb|EDW08437.1| GI19969 [Drosophila mojavensis]
          Length = 358

 Score = 38.5 bits (88), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 14/55 (25%), Positives = 32/55 (58%), Gaps = 1/55 (1%)

Query: 75  DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIY 129
           D+Y+  EPC MC+ A+  +R++R+++     + G + +  Q + +   +H  E++
Sbjct: 301 DVYLLREPCLMCSMALVHSRVKRIFF-LEQSENGALTSKFQLHAVKELNHHYEVF 354


>gi|160896589|ref|YP_001562171.1| CMP/dCMP deaminase [Delftia acidovorans SPH-1]
 gi|160362173|gb|ABX33786.1| CMP/dCMP deaminase zinc-binding [Delftia acidovorans SPH-1]
          Length = 174

 Score = 38.5 bits (88), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 27/80 (33%), Positives = 33/80 (41%), Gaps = 7/80 (8%)

Query: 25  PVGAV--AVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEP 82
           P GA+  A     +++  GN      D   HAE    R          L +  L  T EP
Sbjct: 43  PFGALLLAPDGETVLAEQGN-----IDTVNHAESTLARTAAANYPGAYLAQCTLVTTFEP 97

Query: 83  CTMCAAAISLARIRRLYYGA 102
           C MCA  I  A I R+ YGA
Sbjct: 98  CAMCAGTIYWAGIGRVLYGA 117


>gi|169827319|ref|YP_001697477.1| riboflavin biosynthesis protein ribD [Lysinibacillus sphaericus
           C3-41]
 gi|168991807|gb|ACA39347.1| Riboflavin biosynthesis protein ribD [Lysinibacillus sphaericus
           C3-41]
          Length = 375

 Score = 38.5 bits (88), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 44/151 (29%), Positives = 65/151 (43%), Gaps = 21/151 (13%)

Query: 3   KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           K   +M  AL+ A +A    N  P VGAV V N+ I+    +R    K    HAE+ A R
Sbjct: 9   KDEKYMQLALDLAASAKGNTNPNPLVGAVIVKNDIIVGTGLHR----KAGEPHAEVHAFR 64

Query: 61  MGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGT 114
           M     + E      LYVTLEPC+       CA  +  + + R+     +P       G 
Sbjct: 65  M-----AGEHAQNATLYVTLEPCSHFGKTPPCANLVKDSGVSRVVVAMQDPNPTVAGRGI 119

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
           Q    A       +  G+ EQ++R++ + F 
Sbjct: 120 QLLRDAGI----TVEVGVLEQQARRLNERFI 146


>gi|255715123|ref|XP_002553843.1| KLTH0E08448p [Lachancea thermotolerans]
 gi|238935225|emb|CAR23406.1| KLTH0E08448p [Lachancea thermotolerans]
          Length = 323

 Score = 38.5 bits (88), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 16/40 (40%), Positives = 25/40 (62%)

Query: 73  EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN 112
           + D+Y T EPC+MC+ A+  +RI+R  Y     K G +E+
Sbjct: 245 DFDVYTTHEPCSMCSMALIHSRIKRCIYLTPMNKTGCLES 284


>gi|229191491|ref|ZP_04318474.1| Riboflavin biosynthesis protein [Bacillus cereus ATCC 10876]
 gi|228591971|gb|EEK49807.1| Riboflavin biosynthesis protein [Bacillus cereus ATCC 10876]
          Length = 350

 Score = 38.5 bits (88), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 38/127 (29%), Positives = 59/127 (46%), Gaps = 19/127 (14%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85
           VG+V V +N+I+    +    +K    HAEI AIRM     + E      +YVTLEPC+ 
Sbjct: 11  VGSVIVNDNRIVGVGAH----MKAGEPHAEIHAIRM-----AGEQARGGTIYVTLEPCSH 61

Query: 86  ------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139
                 CA AI  A I+++     +P       G +    A      E+  G+ E+ S++
Sbjct: 62  HGRTGPCAEAIVQAGIKKVVVATLDPNPLVSGRGIKILQDAGI----EVLVGVCEEESKK 117

Query: 140 IIQDFFK 146
           + + F K
Sbjct: 118 MNEVFNK 124


>gi|161830108|ref|YP_001596350.1| cytidine/deoxycytidylate deaminase family protein [Coxiella
           burnetii RSA 331]
 gi|161761975|gb|ABX77617.1| cytidine/deoxycytidylate deaminase family protein [Coxiella
           burnetii RSA 331]
          Length = 151

 Score = 38.5 bits (88), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 25/78 (32%), Positives = 34/78 (43%), Gaps = 16/78 (20%)

Query: 42  NRNRELKDVTAHAEILAIRMGCRILSQEILPEVD----------------LYVTLEPCTM 85
           N + +  D TAHAE+  IR   R L+   L  +                 +Y + EPC M
Sbjct: 20  NHSVDWHDPTAHAEMSVIRKAARELNVTDLGHIRKEDSKLSQPSEWSHCVIYSSAEPCPM 79

Query: 86  CAAAISLARIRRLYYGAS 103
           C AAI  A I  L + A+
Sbjct: 80  CMAAIYWAGIHYLVFSAT 97


>gi|328873326|gb|EGG21693.1| CMP/dCMP deaminase [Dictyostelium fasciculatum]
          Length = 276

 Score = 38.5 bits (88), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 26/85 (30%), Positives = 36/85 (42%), Gaps = 6/85 (7%)

Query: 25  PVGAVAVLNNKIISRAGNR------NRELKDVTAHAEILAIRMGCRILSQEILPEVDLYV 78
           P GA +  +  I+    N       N+  K +  H EI AI     I  +       LY 
Sbjct: 64  PTGAKSFFSALIVDAVTNEEICYGYNQGGKSMIYHGEIQAIMNCTTITGRNSWSGTYLYT 123

Query: 79  TLEPCTMCAAAISLARIRRLYYGAS 103
           T E C MC AAI  +   ++ YG+S
Sbjct: 124 TGESCPMCQAAIMWSGFDKVIYGSS 148


>gi|313203842|ref|YP_004042499.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase;
           5-aminO-6-(5-phosphoribosylamino)uracil reductase
           [Paludibacter propionicigenes WB4]
 gi|312443158|gb|ADQ79514.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase;
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Paludibacter propionicigenes WB4]
          Length = 360

 Score = 38.5 bits (88), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 41/126 (32%), Positives = 58/126 (46%), Gaps = 17/126 (13%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85
           VGAV V N+KII   G  +R  +   AHAE  AI     +   E+L +  LYV+LEPC+ 
Sbjct: 43  VGAVLVCNDKIIGE-GYHHRYGE---AHAEPNAIN---SVKEVELLGQSTLYVSLEPCSH 95

Query: 86  ------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139
                 CA  I  + I R+  G  +P       G      A      E+  G+ E+  R+
Sbjct: 96  YGKTPPCADLIVSSGIPRVVIGTLDPNPKVAGKGVAKLRNAGV----EVIVGVLEEECRE 151

Query: 140 IIQDFF 145
           + + FF
Sbjct: 152 LNKRFF 157


>gi|261749554|ref|YP_003257240.1| riboflavin biosynthesis protein RibD [Blattabacterium sp.
           (Periplaneta americana) str. BPLAN]
 gi|261497647|gb|ACX84097.1| riboflavin biosynthesis protein RibD [Blattabacterium sp.
           (Periplaneta americana) str. BPLAN]
          Length = 347

 Score = 38.5 bits (88), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 39/130 (30%), Positives = 58/130 (44%), Gaps = 21/130 (16%)

Query: 1   MKKGNVFMSCALEEAQNA-ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
           M    +FM  A++ A+N   L +  P+    +  N +I   G   +   D   HAE+ AI
Sbjct: 1   MNHKKIFMYRAIQLAKNGLGLTSPNPMVGCLIERNGLILSEGWHYKVGMD---HAEVNAI 57

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP----KGGG 109
               R+ +  +L +  LYVTLEPC        C   I  ++I R+  G  +P     G G
Sbjct: 58  N---RVENTSLLTDSTLYVTLEPCVHFGKTPPCVDLIIKSKIPRVVIGIQDPCHKVNGLG 114

Query: 110 I----ENGTQ 115
           I    ENG +
Sbjct: 115 IQKLRENGIE 124


>gi|242764976|ref|XP_002340880.1| cytosine deaminase, putative [Talaromyces stipitatus ATCC 10500]
 gi|218724076|gb|EED23493.1| cytosine deaminase, putative [Talaromyces stipitatus ATCC 10500]
          Length = 154

 Score = 38.5 bits (88), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 26/94 (27%), Positives = 46/94 (48%), Gaps = 1/94 (1%)

Query: 12  LEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEI 70
           ++ A+ A    + P G++ V    +I+  A NR    +D+T H E   +    + LS   
Sbjct: 14  VDLAREAVDAGDAPFGSILVNAAGEILQEARNRVTTEEDITLHPEFTLVIWAQKHLSPTE 73

Query: 71  LPEVDLYVTLEPCTMCAAAISLARIRRLYYGASN 104
                +Y + E C MCA+A + A + R+ Y +S+
Sbjct: 74  RATTTVYTSGEHCPMCASAHAYADLGRIVYVSSS 107


>gi|114705235|ref|ZP_01438143.1| hypothetical protein FP2506_09861 [Fulvimarina pelagi HTCC2506]
 gi|114540020|gb|EAU43140.1| hypothetical protein FP2506_09861 [Fulvimarina pelagi HTCC2506]
          Length = 164

 Score = 38.5 bits (88), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 26/99 (26%), Positives = 40/99 (40%)

Query: 6   VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           V ++  +E A+ A      P G+  V  N  + +         D TAH E    R     
Sbjct: 14  VHLARCVELARQAVEEGHKPFGSRLVAGNGTVLKEDYNRTGDGDPTAHPEFALARWAGLN 73

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASN 104
           +      E  +Y + E C MCA A  +  + R+ YG+S 
Sbjct: 74  MEPSERAEATVYTSGEHCPMCATAHGIVGLGRIVYGSST 112


>gi|319401074|gb|EFV89293.1| riboflavin biosynthesis protein RibD [Staphylococcus epidermidis
           FRI909]
          Length = 347

 Score = 38.5 bits (88), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 35/107 (32%), Positives = 46/107 (42%), Gaps = 19/107 (17%)

Query: 7   FMSCALEEAQ--NAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM-GC 63
           FM  A++ AQ  N       PVG+V V N +I+    +    LK    HAE+ AI M G 
Sbjct: 4   FMDDAIQLAQMVNGQTGVNPPVGSVVVKNGRIVGLGAH----LKKGDKHAEVQAIEMAGL 59

Query: 64  RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASN 104
                 I      YV+LEPCT       C   I  A I ++ Y   +
Sbjct: 60  NAQGATI------YVSLEPCTHHGSTPPCVDKIIEAGISKVIYAVKD 100


>gi|331223607|ref|XP_003324476.1| hypothetical protein PGTG_05282 [Puccinia graminis f. sp. tritici
           CRL 75-36-700-3]
 gi|309303466|gb|EFP80057.1| hypothetical protein PGTG_05282 [Puccinia graminis f. sp. tritici
           CRL 75-36-700-3]
          Length = 406

 Score = 38.5 bits (88), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 22/94 (23%), Positives = 48/94 (51%), Gaps = 19/94 (20%)

Query: 32  LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEIL----PEVDL----------- 76
           ++N I+S + +R +   +   HA    + +   + +Q+++    PE  L           
Sbjct: 278 VSNPILSASVDRRKSSSNRLRHA---VVELTTTVSAQDLIHPRSPETALHPIPYLLTNQI 334

Query: 77  -YVTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109
            +++ EPC +C+ A+  +RI+ L++ A +P+ GG
Sbjct: 335 VFLSHEPCLLCSMALLHSRIKHLFFLAPSPRSGG 368


>gi|195335637|ref|XP_002034470.1| GM21898 [Drosophila sechellia]
 gi|194126440|gb|EDW48483.1| GM21898 [Drosophila sechellia]
          Length = 360

 Score = 38.5 bits (88), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 15/55 (27%), Positives = 31/55 (56%), Gaps = 1/55 (1%)

Query: 75  DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIY 129
           D+Y+  EPC MC+ A+  +R +R+++   N   G +    Q +++   +H  E++
Sbjct: 296 DIYLLQEPCLMCSMALVHSRAKRVFF-VKNSDNGALATRFQLHSVRELNHHYEVF 349


>gi|126650091|ref|ZP_01722324.1| riboflavin specific deaminase [Bacillus sp. B14905]
 gi|126593263|gb|EAZ87225.1| riboflavin specific deaminase [Bacillus sp. B14905]
          Length = 375

 Score = 38.5 bits (88), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 44/151 (29%), Positives = 65/151 (43%), Gaps = 21/151 (13%)

Query: 3   KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           K   +M  AL+ A +A    N  P VGAV V N+ I+    +R    K    HAE+ A R
Sbjct: 9   KDEKYMQLALDLAASAKGNTNPNPLVGAVIVKNDIIVGTGLHR----KAGEPHAEVHAFR 64

Query: 61  MGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGT 114
           M     + E      LYVTLEPC+       CA  +  + + R+     +P       G 
Sbjct: 65  M-----AGEHAKNATLYVTLEPCSHFGKTPPCANLVKESGVSRVVVAMQDPNPTVAGRGI 119

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
           Q    A       +  G+ EQ++R++ + F 
Sbjct: 120 QLLRDAGI----AVEVGVLEQQARRLNERFI 146


>gi|228953669|ref|ZP_04115709.1| Riboflavin biosynthesis protein [Bacillus thuringiensis serovar
           kurstaki str. T03a001]
 gi|229070840|ref|ZP_04204068.1| Riboflavin biosynthesis protein [Bacillus cereus F65185]
 gi|229179672|ref|ZP_04307022.1| Riboflavin biosynthesis protein [Bacillus cereus 172560W]
 gi|228603778|gb|EEK61249.1| Riboflavin biosynthesis protein [Bacillus cereus 172560W]
 gi|228712230|gb|EEL64177.1| Riboflavin biosynthesis protein [Bacillus cereus F65185]
 gi|228805903|gb|EEM52482.1| Riboflavin biosynthesis protein [Bacillus thuringiensis serovar
           kurstaki str. T03a001]
          Length = 350

 Score = 38.5 bits (88), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 38/127 (29%), Positives = 59/127 (46%), Gaps = 19/127 (14%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85
           VG+V V +N+I+    +    +K    HAEI AIRM     + E      +YVTLEPC+ 
Sbjct: 11  VGSVIVNDNRIVGVGAH----MKAGEPHAEIHAIRM-----AGEQARGGTIYVTLEPCSH 61

Query: 86  ------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139
                 CA AI  A I+++     +P       G +    A      E+  G+ E+ S++
Sbjct: 62  HGRTGPCAEAIVQAGIKKVVVATLDPNPLVSGRGIKILQDAGI----EVLVGVCEEESKK 117

Query: 140 IIQDFFK 146
           + + F K
Sbjct: 118 MNEVFNK 124


>gi|319900207|ref|YP_004159935.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase;
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Bacteroides helcogenes P 36-108]
 gi|319415238|gb|ADV42349.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase;
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Bacteroides helcogenes P 36-108]
          Length = 347

 Score = 38.5 bits (88), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 44/147 (29%), Positives = 64/147 (43%), Gaps = 21/147 (14%)

Query: 7   FMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
           +M   ++ AQN  L N  P   VGAV V + KII         +    AHAE+ AIR   
Sbjct: 5   YMRRCIQLAQNG-LCNTAPNPMVGAVIVCDGKIIGEG----YHVHCGEAHAEVNAIR--- 56

Query: 64  RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFY 117
            +    +L    +YV+LEPC+       CA  I   +I R+  G  +P       G Q  
Sbjct: 57  SVKDPSLLQRATIYVSLEPCSHYGKTPPCADLIIEKQIPRIIIGCMDPFSKVAGRGIQKL 116

Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDF 144
             A      E+  G+ E+  + +I+ F
Sbjct: 117 KDA----GREVIVGVLEEECKSLIRRF 139


>gi|260223441|emb|CBA34012.1| hypothetical protein Csp_B21900 [Curvibacter putative symbiont of
           Hydra magnipapillata]
          Length = 468

 Score = 38.5 bits (88), Expect = 0.32,   Method: Composition-based stats.
 Identities = 28/91 (30%), Positives = 38/91 (41%), Gaps = 7/91 (7%)

Query: 15  AQNAALRNEIPVGAVAVL--NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILP 72
           AQ A    + P GA+ V      +++  GN      D   HAE    R      + E L 
Sbjct: 27  AQRALTLGKHPFGAILVAPDGETVLAEQGN-----VDTVNHAESALARTAATNFTPEYLW 81

Query: 73  EVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
           +  L  T+EPC MCA     A I  L +G +
Sbjct: 82  DCTLVTTVEPCAMCAGTQYWANIGTLVFGMT 112


>gi|258621774|ref|ZP_05716805.1| conserved hypothetical protein [Vibrio mimicus VM573]
 gi|258626283|ref|ZP_05721130.1| conserved hypothetical protein [Vibrio mimicus VM603]
 gi|258581335|gb|EEW06237.1| conserved hypothetical protein [Vibrio mimicus VM603]
 gi|258586005|gb|EEW10723.1| conserved hypothetical protein [Vibrio mimicus VM573]
          Length = 110

 Score = 38.5 bits (88), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 28/102 (27%), Positives = 49/102 (48%), Gaps = 6/102 (5%)

Query: 46  ELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNP 105
           E  D TAHAE+ AIR  C+   +  L  + L  + EPC MC      + I ++ + A + 
Sbjct: 2   ENNDPTAHAEVEAIRDACKNTKKPHLRGLTLLASGEPCAMCYLNAMYSGISKVLFAADSN 61

Query: 106 KGG--GIENGTQFYTLATCHHSPEIYP-GISEQRSRQIIQDF 144
           +    G +  + +  LA   + P  +P  IS+ ++   ++ F
Sbjct: 62  EAAVHGFDYRSTYSMLA---NFPTRWPMQISKHQTEGALEPF 100


>gi|166710521|ref|ZP_02241728.1| cytosine deaminase [Xanthomonas oryzae pv. oryzicola BLS256]
          Length = 151

 Score = 38.5 bits (88), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 28/105 (26%), Positives = 43/105 (40%), Gaps = 4/105 (3%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNN-KIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
            +  A+ EA+       IP+GA    N+ +++    NR  +  D + H E  A R   R 
Sbjct: 10  LLDTAITEARQGLAEGGIPIGAALYHNDGRLLGCGHNRRVQENDPSVHGETDAFRKAGR- 68

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI 110
             Q    +  +  TL PC  C+  +    I  +  G S    GGI
Sbjct: 69  --QRRYKDTIMVTTLAPCWYCSGLVRQFNIGTVVVGESVTFQGGI 111


>gi|237880781|gb|ACR33039.1| cytosine/adenine deaminase [Actinoplanes garbadinensis]
          Length = 161

 Score = 38.5 bits (88), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 27/91 (29%), Positives = 41/91 (45%), Gaps = 2/91 (2%)

Query: 15  AQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPE 73
           A+ A    + P G+V V  + K++    NR R   D T H E    R     L+      
Sbjct: 18  AREALDDGDEPFGSVLVSADGKVLFEDRNRVRH-GDATQHPEFAISRWAAEHLTPRERAS 76

Query: 74  VDLYVTLEPCTMCAAAISLARIRRLYYGASN 104
             +Y + E C MC+A+    R+ R+ Y AS+
Sbjct: 77  ATVYTSGEHCPMCSASHGWVRLGRIVYAASS 107


>gi|306833066|ref|ZP_07466197.1| riboflavin biosynthesis protein RibD [Streptococcus bovis ATCC
           700338]
 gi|304424775|gb|EFM27910.1| riboflavin biosynthesis protein RibD [Streptococcus bovis ATCC
           700338]
          Length = 351

 Score = 38.5 bits (88), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 35/96 (36%), Positives = 47/96 (48%), Gaps = 17/96 (17%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85
           VGAV V N ++I+R  +    L+    HAE  AI + C +   E L    LYVTLEPC  
Sbjct: 26  VGAVIVKNGRVIARGAH----LQYGHEHAEKNAI-LHCEV--PEELANSTLYVTLEPCHH 78

Query: 86  ------CAAAISLARIRRLYYGASNPK----GGGIE 111
                 C  AI  A I+++  G  +P     G G+E
Sbjct: 79  TGKQPPCTQAIVEAGIKKVVVGQLDPNPLVAGKGLE 114


>gi|66802007|ref|XP_629827.1| hypothetical protein DDB_G0292096 [Dictyostelium discoideum AX4]
 gi|60463211|gb|EAL61404.1| hypothetical protein DDB_G0292096 [Dictyostelium discoideum AX4]
          Length = 321

 Score = 38.5 bits (88), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 18/61 (29%), Positives = 29/61 (47%)

Query: 44  NRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
           N    ++ +H EI+AI     +          LY + EPC MC+AA+  A  + + +G  
Sbjct: 98  NTGKPNIISHGEIVAINNCTALHGITSFTNYTLYTSGEPCAMCSAALLWADFKTIVWGTF 157

Query: 104 N 104
           N
Sbjct: 158 N 158


>gi|299142759|ref|ZP_07035888.1| riboflavin biosynthesis protein RibD [Prevotella oris C735]
 gi|298575788|gb|EFI47665.1| riboflavin biosynthesis protein RibD [Prevotella oris C735]
          Length = 116

 Score = 38.5 bits (88), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 32/96 (33%), Positives = 46/96 (47%), Gaps = 13/96 (13%)

Query: 16  QNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVD 75
           QNA L     VGAV V +++II         ++    HAE+ A     R   +++LPE  
Sbjct: 19  QNAKLNPM--VGAVIVAHDRIIGEG----YHVRCGEGHAEVNAF-ASVRPEDEKLLPEAT 71

Query: 76  LYVTLEPCTM------CAAAISLARIRRLYYGASNP 105
           +YV+LEPC+       CA  I    I+R   G  +P
Sbjct: 72  IYVSLEPCSHYGKTPPCADLIISKGIKRCVCGCVDP 107


>gi|289664006|ref|ZP_06485587.1| cytosine deaminase [Xanthomonas campestris pv. vasculorum NCPPB702]
 gi|289667443|ref|ZP_06488518.1| cytosine deaminase [Xanthomonas campestris pv. musacearum
           NCPPB4381]
          Length = 151

 Score = 38.5 bits (88), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 28/105 (26%), Positives = 43/105 (40%), Gaps = 4/105 (3%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNN-KIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
            +  A+ EA+       IP+GA    N+ +++    NR  +  D + H E  A R   R 
Sbjct: 10  LLDTAITEARQGLAEGGIPIGAALYHNDGRLLGCGHNRRVQENDPSVHGETDAFRKAGR- 68

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI 110
             Q    +  +  TL PC  C+  +    I  +  G S    GGI
Sbjct: 69  --QRRYKDTIMVTTLAPCWYCSGLVRQFNIGTVVVGESVTFQGGI 111


>gi|171915861|ref|ZP_02931331.1| riboflavin biosynthesis protein RibD [Verrucomicrobium spinosum DSM
           4136]
          Length = 354

 Score = 38.5 bits (88), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 34/110 (30%), Positives = 52/110 (47%), Gaps = 12/110 (10%)

Query: 7   FMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           +M  AL EA+    L +  P VGAV V   ++I +  +     +    HAE+ A+R    
Sbjct: 9   WMRLALAEARRGIGLTSPNPAVGAVLVNEGRLIGQGWHH----RVGQPHAEVEALRNAEA 64

Query: 65  ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGG 108
                 +     YVTLEPC+       C  A++ A + R+ YGA++P  G
Sbjct: 65  NGHGAEIRGATAYVTLEPCSTHGRTGACTVALAKAGVSRVVYGATDPNPG 114


>gi|78046250|ref|YP_362425.1| putative cytosine deaminase [Xanthomonas campestris pv. vesicatoria
           str. 85-10]
 gi|78034680|emb|CAJ22325.1| putative cytosine deaminase [Xanthomonas campestris pv. vesicatoria
           str. 85-10]
          Length = 151

 Score = 38.5 bits (88), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 28/105 (26%), Positives = 43/105 (40%), Gaps = 4/105 (3%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNN-KIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
            +  A+ EA+       IP+GA    N+ +++    NR  +  D + H E  A R   R 
Sbjct: 10  LLDTAITEARQGLAEGGIPIGAALYHNDGRLLGCGHNRRVQENDPSVHGETDAFRKAGR- 68

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI 110
             Q    +  +  TL PC  C+  +    I  +  G S    GGI
Sbjct: 69  --QRRYKDTIMVTTLAPCWYCSGLVRQFNIGTVVVGESVTFQGGI 111


>gi|163847753|ref|YP_001635797.1| riboflavin biosynthesis protein RibD [Chloroflexus aurantiacus
           J-10-fl]
 gi|222525619|ref|YP_002570090.1| riboflavin biosynthesis protein RibD [Chloroflexus sp. Y-400-fl]
 gi|163669042|gb|ABY35408.1| riboflavin biosynthesis protein RibD [Chloroflexus aurantiacus
           J-10-fl]
 gi|222449498|gb|ACM53764.1| riboflavin biosynthesis protein RibD [Chloroflexus sp. Y-400-fl]
          Length = 391

 Score = 38.5 bits (88), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 28/88 (31%), Positives = 39/88 (44%), Gaps = 15/88 (17%)

Query: 25  PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84
           PVGAV V + +++     +         HAE +A+               DLY TLEPCT
Sbjct: 33  PVGAVVVRDGQVVGLGATQPAG----GPHAERIALAAAGERARGA-----DLYTTLEPCT 83

Query: 85  M------CAAAISLARIRRLYYGASNPK 106
                  C  AI  A IRR+++ A +P 
Sbjct: 84  FYGRTPPCTEAIIAAGIRRVFFIAHDPD 111


>gi|325925419|ref|ZP_08186818.1| cytosine/adenosine deaminase [Xanthomonas perforans 91-118]
 gi|325928766|ref|ZP_08189935.1| cytosine/adenosine deaminase [Xanthomonas perforans 91-118]
 gi|325540847|gb|EGD12420.1| cytosine/adenosine deaminase [Xanthomonas perforans 91-118]
 gi|325544179|gb|EGD15563.1| cytosine/adenosine deaminase [Xanthomonas perforans 91-118]
          Length = 151

 Score = 38.5 bits (88), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 28/105 (26%), Positives = 43/105 (40%), Gaps = 4/105 (3%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNN-KIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
            +  A+ EA+       IP+GA    N+ +++    NR  +  D + H E  A R   R 
Sbjct: 10  LLDTAITEARQGLAEGGIPIGAALYHNDGRLLGCGHNRRVQENDPSVHGETDAFRKAGR- 68

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI 110
             Q    +  +  TL PC  C+  +    I  +  G S    GGI
Sbjct: 69  --QRRYKDTIMVTTLAPCWYCSGLVRQFNIGTVVVGESVTFQGGI 111


>gi|88808247|ref|ZP_01123758.1| cytidine/deoxycytidylate deaminase family protein [Synechococcus
           sp. WH 7805]
 gi|88788286|gb|EAR19442.1| cytidine/deoxycytidylate deaminase family protein [Synechococcus
           sp. WH 7805]
          Length = 227

 Score = 38.5 bits (88), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 25/80 (31%), Positives = 40/80 (50%), Gaps = 3/80 (3%)

Query: 28  AVAVLNNKIISRA-GNRNRELKDVTAHAEILAIRMGCRILSQE-ILP-EVDLYVTLEPCT 84
             A+LN   +S    + N+E  +   HAE+  I     +  Q+ + P +V    T EPCT
Sbjct: 58  GAAMLNKHDLSTIIADTNQETLNPLFHAEVQTINHYYSMPKQQHVAPGDVLFLATHEPCT 117

Query: 85  MCAAAISLARIRRLYYGASN 104
           +C++AI+ A     YY  S+
Sbjct: 118 LCSSAITWAGFDNFYYFFSH 137


>gi|70726154|ref|YP_253068.1| riboflavin specific deaminase [Staphylococcus haemolyticus
          JCSC1435]
 gi|68446878|dbj|BAE04462.1| riboflavin specific deaminase [Staphylococcus haemolyticus
          JCSC1435]
          Length = 347

 Score = 38.5 bits (88), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 28/80 (35%), Positives = 40/80 (50%), Gaps = 11/80 (13%)

Query: 7  FMSCALEEAQNAALRNEI--PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
          FM  A++ AQ    +  I  PVGAV V N +I+    +    LK    HAE+ A+ M  +
Sbjct: 4  FMEYAIQLAQMVKGQTGINPPVGAVVVNNGRIVGLGAH----LKQGEKHAEVQALDMAGK 59

Query: 65 ILSQEILPEVDLYVTLEPCT 84
               I+     Y++LEPCT
Sbjct: 60 EAKGGII-----YISLEPCT 74


>gi|288904903|ref|YP_003430125.1| riboflavin-specific deaminase [Streptococcus gallolyticus UCN34]
 gi|288731629|emb|CBI13184.1| riboflavin-specific deaminase [Streptococcus gallolyticus UCN34]
          Length = 351

 Score = 38.1 bits (87), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 40/118 (33%), Positives = 57/118 (48%), Gaps = 21/118 (17%)

Query: 7   FMSCALEEAQNA---ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
           +M+ A+ EA+        N + VGAV V N ++I+R  +    L+    HAE  AI + C
Sbjct: 5   YMAQAIAEAKKGFRQTYTNPL-VGAVIVKNGRVIARGAH----LQYGHEHAEKNAI-LHC 58

Query: 64  RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPK----GGGIE 111
              + E L    LYVTLEPC        C  AI  A I+++  G  +P     G G+E
Sbjct: 59  E--APEELTNSTLYVTLEPCHHTGKQPPCTQAIVEAGIKKVVVGQLDPNPLVAGKGLE 114


>gi|195431281|ref|XP_002063675.1| GK15805 [Drosophila willistoni]
 gi|194159760|gb|EDW74661.1| GK15805 [Drosophila willistoni]
          Length = 352

 Score = 38.1 bits (87), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 17/61 (27%), Positives = 34/61 (55%), Gaps = 1/61 (1%)

Query: 75  DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISE 134
           D+Y+  EPC MC+ A+  +R +R+++  ++   G +    Q +T+   +H  E++    E
Sbjct: 290 DVYLLQEPCLMCSMALVHSRAKRIFFLQTS-DNGALLTRFQLHTVKELNHHYEVFQFTRE 348

Query: 135 Q 135
           Q
Sbjct: 349 Q 349


>gi|238502305|ref|XP_002382386.1| conserved hypothetical protein [Aspergillus flavus NRRL3357]
 gi|220691196|gb|EED47544.1| conserved hypothetical protein [Aspergillus flavus NRRL3357]
          Length = 164

 Score = 38.1 bits (87), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 22/58 (37%), Positives = 26/58 (44%)

Query: 53  HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI 110
           HAE    R      +++ L E     T EPC MCA  I  A I RL Y AS     G+
Sbjct: 56  HAEAELARNAADNYARDYLAETTFISTWEPCAMCAGTIYWANIGRLVYLASEKALQGV 113


>gi|9392602|gb|AAF87213.1|AF228578_2 unknown [Rhizobium leguminosarum bv. viciae]
          Length = 195

 Score = 38.1 bits (87), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 18/61 (29%), Positives = 31/61 (50%)

Query: 44  NRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
           N EL++   H E+  ++    +  ++   ++    T EPCTMC +AI+ A     YY  S
Sbjct: 51  NNELENPLWHGEVHTLKRFYELGDKQPTKDLIFLSTHEPCTMCMSAITWAGFDNFYYFFS 110

Query: 104 N 104
           +
Sbjct: 111 H 111


>gi|327405290|ref|YP_004346128.1| riboflavin biosynthesis protein RibD [Fluviicola taffensis DSM
           16823]
 gi|327320798|gb|AEA45290.1| riboflavin biosynthesis protein RibD [Fluviicola taffensis DSM
           16823]
          Length = 347

 Score = 38.1 bits (87), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 31/96 (32%), Positives = 47/96 (48%), Gaps = 17/96 (17%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85
           VGAV V N +II    ++    K   AHAE+ A+     +  + +L E  +YVTLEPC+ 
Sbjct: 28  VGAVIVHNQQIIGEGYHQ----KYGEAHAEVNAVN---SVKDKSLLSESTIYVTLEPCSH 80

Query: 86  ------CAAAISLARIRRLYYGASNP----KGGGIE 111
                 CA  +  ++ +R+     +P     G GIE
Sbjct: 81  FGKTPPCADLLVHSQFKRVVIAQIDPFSEVAGRGIE 116


>gi|281424669|ref|ZP_06255582.1| riboflavin biosynthesis protein RibD [Prevotella oris F0302]
 gi|281401039|gb|EFB31870.1| riboflavin biosynthesis protein RibD [Prevotella oris F0302]
          Length = 318

 Score = 38.1 bits (87), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 37/118 (31%), Positives = 58/118 (49%), Gaps = 19/118 (16%)

Query: 7   FMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
           +M   L+ A+N   +N  P   VGAV V +++II    +    ++    HAE+ A     
Sbjct: 6   YMKRCLQLAENGR-QNAKPNPMVGAVIVAHDRIIGEGYH----VRCGEGHAEVNAF-ASV 59

Query: 64  RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP----KGGGIE 111
           R   +++LPE  +YV+LEPC+       CA  I    I+R   G  +P    +G GI+
Sbjct: 60  RPEDEKLLPEATIYVSLEPCSHYGKTPPCADLIISKGIKRCVCGCVDPFAKVQGRGIQ 117


>gi|301064689|ref|ZP_07205078.1| riboflavin biosynthesis protein RibD [delta proteobacterium NaphS2]
 gi|300441231|gb|EFK05607.1| riboflavin biosynthesis protein RibD [delta proteobacterium NaphS2]
          Length = 369

 Score = 38.1 bits (87), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 35/118 (29%), Positives = 53/118 (44%), Gaps = 23/118 (19%)

Query: 7   FMSCALEEAQNAALRNEI--PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR-MGC 63
           FM  A++EA+    R      VGAV V   ++++   ++   +     HAE+ A R +G 
Sbjct: 8   FMKLAVKEARKGLGRTSPNPAVGAVIVKEGRVVASGFHKQAGM----PHAEVEAFRKVGN 63

Query: 64  RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPK----GGGIE 111
           R       P   LYVTLEPC        C   I  + ++R+  G  +P     GGG +
Sbjct: 64  RA------PGATLYVTLEPCNHHGKTPPCTELILKSGVKRVVVGMRDPNPLVTGGGCD 115


>gi|282889950|ref|ZP_06298485.1| hypothetical protein pah_c008o037 [Parachlamydia acanthamoebae str.
           Hall's coccus]
 gi|281500143|gb|EFB42427.1| hypothetical protein pah_c008o037 [Parachlamydia acanthamoebae str.
           Hall's coccus]
          Length = 359

 Score = 38.1 bits (87), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 35/130 (26%), Positives = 54/130 (41%), Gaps = 19/130 (14%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85
           VGAV V   KI+     +        AHAEI+A+R          L     YVTLEPC+ 
Sbjct: 21  VGAVIVKQGKIVGEGFTQ----APGEAHAEIMALRQALHQAENSTL-----YVTLEPCSH 71

Query: 86  ------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139
                 C  AI  A+I  +     +P       G Q    A       +  G+ +QR+ +
Sbjct: 72  FGKTPPCVNAIIQAKIAHVVIALEDPDPQVSGRGIQKLKEAGI----SVTVGVEQQRATE 127

Query: 140 IIQDFFKERR 149
           +++ +  +R+
Sbjct: 128 LLEPYLFQRK 137


>gi|291454680|ref|ZP_06594070.1| conserved hypothetical protein [Streptomyces albus J1074]
 gi|291357629|gb|EFE84531.1| conserved hypothetical protein [Streptomyces albus J1074]
          Length = 163

 Score = 38.1 bits (87), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 32/102 (31%), Positives = 46/102 (45%), Gaps = 2/102 (1%)

Query: 12  LEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELK-DVTAHAEILAIRMGCRILSQEI 70
           +E A  A    + P G+V V  +  + RA +RNR    D T H E    R     L+   
Sbjct: 14  VELAAQALDAGDEPFGSVLVDGDGTV-RAEDRNRVASGDSTRHPEFALARWAAENLTVAE 72

Query: 71  LPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN 112
                +Y + E C MCAAA +   + R+ Y AS+ +  G  N
Sbjct: 73  RAAATVYTSGEHCPMCAAAHAWVGLGRIVYAASSEQLTGWLN 114


>gi|171677037|ref|XP_001903470.1| hypothetical protein [Podospora anserina S mat+]
 gi|170936586|emb|CAP61245.1| unnamed protein product [Podospora anserina S mat+]
          Length = 216

 Score = 38.1 bits (87), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 31/113 (27%), Positives = 45/113 (39%), Gaps = 22/113 (19%)

Query: 12  LEEAQNAALRNEIPVGAVA--VLNNK-------IISRAGNRNRELKDVTAHAEILAIRMG 62
           + +A   AL +  P  A    ++N+        +I    N+N    + T H E+ AI   
Sbjct: 28  IHQANTLALSHPCPFAAFGSVIVNHTTGNPQGTLICTGANQNSRTGNPTLHGEMAAIS-N 86

Query: 63  CRIL------------SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
           C  L            S     ++ LY   E C MCAAA+  A +R   YG S
Sbjct: 87  CSSLFVSSAYNMTPAESLAAFKQLTLYTNAESCPMCAAAVRWAGLREYIYGVS 139


>gi|325288196|ref|YP_004263986.1| riboflavin biosynthesis protein RibD [Cellulophaga lytica DSM 7489]
 gi|324323650|gb|ADY31115.1| riboflavin biosynthesis protein RibD [Cellulophaga lytica DSM 7489]
          Length = 350

 Score = 38.1 bits (87), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 39/132 (29%), Positives = 57/132 (43%), Gaps = 19/132 (14%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85
           VGA+ V NN II              +HAE+ AI     I  + +L E  +YVTLEPC+ 
Sbjct: 28  VGALIVHNNAIIGEGFTSPYG----GSHAEVNAIN---SIKDKSVLKESTIYVTLEPCSH 80

Query: 86  ------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139
                 CA  I   +I  +  G  +P      NG +    A C+    +  G+ E+  R+
Sbjct: 81  YGKTPPCADLIIKHKIPNIVIGLKDPHEKVAGNGIKKLRAAGCN----VTIGVLEEECRE 136

Query: 140 IIQDF--FKERR 149
               F  F E++
Sbjct: 137 HHNRFLCFYEKK 148


>gi|310827884|ref|YP_003960241.1| riboflavin biosynthesis protein RibD [Eubacterium limosum KIST612]
 gi|308739618|gb|ADO37278.1| riboflavin biosynthesis protein RibD [Eubacterium limosum KIST612]
          Length = 367

 Score = 38.1 bits (87), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 44/147 (29%), Positives = 57/147 (38%), Gaps = 21/147 (14%)

Query: 7   FMSCALEEA-QNAALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           +M  ALEEA +     N  P VGAV V N  +I R  +          HAE  AI     
Sbjct: 6   YMRLALEEAWKGCGFVNPNPMVGAVIVKNGCVIGRGAHERYG----GPHAERNAIAH--- 58

Query: 65  ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
               E L +  LYVTL PC        C   +    IRR+  G+ +P     E   +   
Sbjct: 59  --CTEDLQDATLYVTLTPCCHFGKTPPCTDVVLENGIRRVVIGSHDPNPLVAEKSIEILR 116

Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFF 145
                H  E+  GI +Q    +   FF
Sbjct: 117 ----QHGVEVTTGILQQECDALNDAFF 139


>gi|325920349|ref|ZP_08182285.1| cytosine/adenosine deaminase [Xanthomonas gardneri ATCC 19865]
 gi|325549169|gb|EGD20087.1| cytosine/adenosine deaminase [Xanthomonas gardneri ATCC 19865]
          Length = 186

 Score = 38.1 bits (87), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 31/91 (34%), Positives = 42/91 (46%), Gaps = 5/91 (5%)

Query: 17  NAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS----QEIL 71
           N   R+  P GAV    +N+II+ A NR        AHAE +A  +  + L      ++L
Sbjct: 41  NVQERSGGPFGAVVFGPDNRIIAAAVNRVVPQTTSLAHAENMAYMLAQQRLQTPRLNDVL 100

Query: 72  PEVDLYVTLEPCTMCAAAISLARIRRLYYGA 102
             V L  + +PC  C  A   A I RL  GA
Sbjct: 101 SPVTLATSAQPCCQCYGATVWAGIDRLLIGA 131


>gi|332703475|ref|ZP_08423563.1| riboflavin biosynthesis protein RibD [Desulfovibrio africanus str.
           Walvis Bay]
 gi|332553624|gb|EGJ50668.1| riboflavin biosynthesis protein RibD [Desulfovibrio africanus str.
           Walvis Bay]
          Length = 380

 Score = 38.1 bits (87), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 29/79 (36%), Positives = 37/79 (46%), Gaps = 14/79 (17%)

Query: 75  DLYVTLEPCTM------CAAAISLARIRRLYYGAS--NPKGGGIENGTQFYTLATCHHSP 126
           D+YVTLEPC+       C  AI  A IRR++ G    NP   G   GT++          
Sbjct: 71  DMYVTLEPCSHHGKTPPCTEAILEAGIRRVFVGCKDLNPTVPG--RGTEYLL----SKGV 124

Query: 127 EIYPGISEQRSRQIIQDFF 145
           ++  GI EQ  R  I DF 
Sbjct: 125 QVELGILEQECRDAIADFM 143


>gi|239982837|ref|ZP_04705361.1| hypothetical protein SalbJ_25624 [Streptomyces albus J1074]
          Length = 166

 Score = 38.1 bits (87), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 32/102 (31%), Positives = 46/102 (45%), Gaps = 2/102 (1%)

Query: 12  LEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELK-DVTAHAEILAIRMGCRILSQEI 70
           +E A  A    + P G+V V  +  + RA +RNR    D T H E    R     L+   
Sbjct: 17  VELAAQALDAGDEPFGSVLVDGDGTV-RAEDRNRVASGDSTRHPEFALARWAAENLTVAE 75

Query: 71  LPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN 112
                +Y + E C MCAAA +   + R+ Y AS+ +  G  N
Sbjct: 76  RAAATVYTSGEHCPMCAAAHAWVGLGRIVYAASSEQLTGWLN 117


>gi|227872741|ref|ZP_03991064.1| hypothetical protein HMPREF6123_1003 [Oribacterium sinus F0268]
 gi|227841402|gb|EEJ51709.1| hypothetical protein HMPREF6123_1003 [Oribacterium sinus F0268]
          Length = 83

 Score = 38.1 bits (87), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 24/83 (28%), Positives = 35/83 (42%), Gaps = 19/83 (22%)

Query: 1  MKKGNVFMSCALEEAQNAALRNEIPVGAV-------------------AVLNNKIISRAG 41
          MK    +M  AL  A+ AA R ++P+GA+                    +L   I+ R  
Sbjct: 1  MKTEKDYMKMALSLAKKAASRGDVPIGALIVYDGTKPDSPMGRLCQAKGILPGTILGRGY 60

Query: 42 NRNRELKDVTAHAEILAIRMGCR 64
          NR  +  +   H EILAI   C+
Sbjct: 61 NRRNQKNNALYHGEILAIEKACK 83


>gi|21241410|ref|NP_640992.1| cytosine deaminase [Xanthomonas axonopodis pv. citri str. 306]
 gi|294625645|ref|ZP_06704268.1| cytosine deaminase [Xanthomonas fuscans subsp. aurantifolii str.
           ICPB 11122]
 gi|294666814|ref|ZP_06732047.1| cytosine deaminase [Xanthomonas fuscans subsp. aurantifolii str.
           ICPB 10535]
 gi|21106745|gb|AAM35528.1| cytosine deaminase [Xanthomonas axonopodis pv. citri str. 306]
 gi|292600068|gb|EFF44182.1| cytosine deaminase [Xanthomonas fuscans subsp. aurantifolii str.
           ICPB 11122]
 gi|292603398|gb|EFF46816.1| cytosine deaminase [Xanthomonas fuscans subsp. aurantifolii str.
           ICPB 10535]
          Length = 151

 Score = 38.1 bits (87), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 28/105 (26%), Positives = 43/105 (40%), Gaps = 4/105 (3%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNN-KIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
            +  A+ EA+       IP+GA    N+ +++    NR  +  D + H E  A R   R 
Sbjct: 10  LLDTAIAEARQGLAEGGIPIGAALYHNDGRLLGCGHNRRVQENDPSVHGETDAFRKAGR- 68

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI 110
             Q    +  +  TL PC  C+  +    I  +  G S    GGI
Sbjct: 69  --QRRYKDTIMVTTLAPCWYCSGLVRQFNIGTVVVGESVTFQGGI 111


>gi|260886861|ref|ZP_05898124.1| riboflavin biosynthesis protein RibD [Selenomonas sputigena ATCC
           35185]
 gi|330839340|ref|YP_004413920.1| riboflavin biosynthesis protein RibD [Selenomonas sputigena ATCC
           35185]
 gi|260863460|gb|EEX77960.1| riboflavin biosynthesis protein RibD [Selenomonas sputigena ATCC
           35185]
 gi|329747104|gb|AEC00461.1| riboflavin biosynthesis protein RibD [Selenomonas sputigena ATCC
           35185]
          Length = 367

 Score = 38.1 bits (87), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 43/155 (27%), Positives = 68/155 (43%), Gaps = 23/155 (14%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57
           M++   FM  AL  A NA  R   P   VGAV V   +I+    +R    K  T HAE+ 
Sbjct: 1   MQQDEDFMREALLLAANARGRTA-PNPLVGAVIVREGRIVGAGWHR----KAGTPHAEVH 55

Query: 58  AIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIE 111
           A+ M     + ++     +YVTLEPC+       CA A+  A ++R+     +P      
Sbjct: 56  ALAM-----AGDLAHGATVYVTLEPCSHHGRTGPCAEALVKAGVKRVVTAMLDPNPLVAG 110

Query: 112 NGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
            G      A      E+  G+  + +R++ + + K
Sbjct: 111 KGKAMLEAAGV----EVTVGVLAEEARRLNEAYLK 141


>gi|225558752|gb|EEH07036.1| conserved hypothetical protein [Ajellomyces capsulatus G186AR]
          Length = 197

 Score = 38.1 bits (87), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 23/66 (34%), Positives = 30/66 (45%), Gaps = 4/66 (6%)

Query: 42  NRNRELKDVTAHAEILAIRMGCRILSQ----EILPEVDLYVTLEPCTMCAAAISLARIRR 97
           N+  E+  +T   +IL  + G   L+     E   E  LY   E C MCAAAI  A  + 
Sbjct: 83  NKTWEIAAITNCTDILTNKHGRFKLTSLEALEAFKEFTLYTNAESCPMCAAAIRWAGFKE 142

Query: 98  LYYGAS 103
             YG S
Sbjct: 143 YVYGTS 148


>gi|170756114|ref|YP_001782503.1| riboflavin biosynthesis protein RibD [Clostridium botulinum B1 str.
           Okra]
 gi|169121326|gb|ACA45162.1| riboflavin biosynthesis protein RibD [Clostridium botulinum B1 str.
           Okra]
          Length = 365

 Score = 38.1 bits (87), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 46/158 (29%), Positives = 70/158 (44%), Gaps = 29/158 (18%)

Query: 1   MKKGNVFMSCALEEAQNAALR-NEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           M+  N  M  AL+ A+    + N  P VGA+ V NNKII    ++         HAE+ A
Sbjct: 1   MEDYNFHMEKALKLAERGEGKVNPNPKVGAIVVKNNKIIGEGYHKYFG----GPHAEVYA 56

Query: 59  IRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP----KGG 108
           +R      + E      +YVTLEPC+       CA +I    I +      +P    +G 
Sbjct: 57  LRE-----AGEKAKGATIYVTLEPCSHYGKTPPCAESIVKMGISKAIIAMKDPNPLVEGR 111

Query: 109 GIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
           GI+   Q        +  E+  GI E+ S+++ + F K
Sbjct: 112 GIDILKQ--------NGIEVVTGIMEKESKKLNEVFIK 141


>gi|148380824|ref|YP_001255365.1| riboflavin biosynthesis protein RibD [Clostridium botulinum A str.
           ATCC 3502]
 gi|153933315|ref|YP_001385131.1| riboflavin biosynthesis protein RibD [Clostridium botulinum A str.
           ATCC 19397]
 gi|153935215|ref|YP_001388600.1| riboflavin biosynthesis protein RibD [Clostridium botulinum A str.
           Hall]
 gi|148290308|emb|CAL84432.1| riboflavin biosynthesis protein ribd [includes:
           diaminohydroxyphosphoribosylaminopyrimidine deaminase
           and 5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Clostridium botulinum A str. ATCC 3502]
 gi|152929359|gb|ABS34859.1| riboflavin biosynthesis protein RibD [Clostridium botulinum A str.
           ATCC 19397]
 gi|152931129|gb|ABS36628.1| riboflavin biosynthesis protein RibD [Clostridium botulinum A str.
           Hall]
          Length = 365

 Score = 38.1 bits (87), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 45/158 (28%), Positives = 71/158 (44%), Gaps = 29/158 (18%)

Query: 1   MKKGNVFMSCALEEAQNAALR-NEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           M+  N +M  AL+ A+    + N  P VGA+ V NNKII    ++         HAE+ A
Sbjct: 1   MEDYNFYMEKALKLAERGEGKVNPNPKVGAIVVNNNKIIGEGYHKYFG----GPHAEVYA 56

Query: 59  IRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP----KGG 108
           ++      + E      +YVTLEPC+       CA +I    I +      +P    +G 
Sbjct: 57  LKE-----AGEKAKGATIYVTLEPCSHYGKTPPCAESIVKMGISKAIIAMKDPNPLVEGR 111

Query: 109 GIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
           GI+   Q        +  E+  GI E+ S+++ + F K
Sbjct: 112 GIDILKQ--------NGIEVITGIMEKESKKLNEVFIK 141


>gi|332662070|ref|YP_004444858.1| riboflavin biosynthesis protein RibD [Haliscomenobacter hydrossis
          DSM 1100]
 gi|332330884|gb|AEE47985.1| riboflavin biosynthesis protein RibD [Haliscomenobacter hydrossis
          DSM 1100]
          Length = 351

 Score = 38.1 bits (87), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 24/58 (41%), Positives = 35/58 (60%), Gaps = 5/58 (8%)

Query: 26 VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83
          VGAV V +NKII    ++    K   AHAE+ A+     + ++ ++PE  LYV+LEPC
Sbjct: 29 VGAVLVYDNKIIGEGYHQ----KYGGAHAEVNAL-ASVSLSNRPLIPESTLYVSLEPC 81


>gi|299143100|ref|ZP_07036209.1| riboflavin biosynthesis protein RibD [Prevotella oris C735]
 gi|298575428|gb|EFI47325.1| riboflavin biosynthesis protein RibD [Prevotella oris C735]
          Length = 318

 Score = 38.1 bits (87), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 35/106 (33%), Positives = 52/106 (49%), Gaps = 17/106 (16%)

Query: 16  QNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVD 75
           QNA L     VGAV V +++II    +    ++    HAE+ A     R   +++LPE  
Sbjct: 19  QNAKLNPM--VGAVIVAHDRIIGEGYH----VRCGEGHAEVNAF-ASVRPEDEKLLPEAT 71

Query: 76  LYVTLEPCTM------CAAAISLARIRRLYYGASNP----KGGGIE 111
           +YV+LEPC+       CA  I    I+R   G  +P    +G GI+
Sbjct: 72  IYVSLEPCSHYGKTPPCADLIISKGIKRCVCGCVDPFAKVQGRGIQ 117


>gi|237719659|ref|ZP_04550140.1| riboflavin biosynthesis protein ribD [Bacteroides sp. 2_2_4]
 gi|229450928|gb|EEO56719.1| riboflavin biosynthesis protein ribD [Bacteroides sp. 2_2_4]
          Length = 345

 Score = 38.1 bits (87), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 43/147 (29%), Positives = 67/147 (45%), Gaps = 21/147 (14%)

Query: 7   FMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
           +M   +E A+N  L N  P   VGAV V + +II    +    ++   AHAE+ AIR   
Sbjct: 6   YMRRCIELAKNG-LCNVSPNPMVGAVIVCDGRIIGEGYH----IRCGEAHAEVNAIR--- 57

Query: 64  RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFY 117
            +  + +L    +YV+LEPC+       CA  I   +I R+  G  +P       G Q  
Sbjct: 58  SVKDESLLKRSTIYVSLEPCSHYGKTPPCADLIIEKQIPRIVIGCQDPFSEVAGRGIQKL 117

Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDF 144
             A      E+  G+ E+  + +I+ F
Sbjct: 118 RDA----GREVTVGVLEEECKSLIRRF 140


>gi|329768554|ref|ZP_08260041.1| riboflavin biosynthesis protein RibD [Gemella haemolysans M341]
 gi|328836595|gb|EGF86254.1| riboflavin biosynthesis protein RibD [Gemella haemolysans M341]
          Length = 356

 Score = 38.1 bits (87), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 42/128 (32%), Positives = 58/128 (45%), Gaps = 23/128 (17%)

Query: 7   FMSCALEEAQNAALRNEIP--VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           FM+ AL EA+  A        VGA+ V +NKI++R  +    L+    HAE  AI   C+
Sbjct: 5   FMNLALLEAKRGAKYTHTNPLVGAIIVKDNKIVARGSH----LRYGCEHAEKNAIST-CK 59

Query: 65  ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP----KGGGI---- 110
             + E +    LYVTLEPC        C  AI    I ++     +P     G GI    
Sbjct: 60  --TPEKIFNSTLYVTLEPCNHKGKQPPCTEAILKMGISKVVVAQLDPNPIVSGKGIKFLR 117

Query: 111 ENGTQFYT 118
           +NG +  T
Sbjct: 118 DNGIEVTT 125


>gi|326384274|ref|ZP_08205956.1| CMP/dCMP deaminase zinc-binding protein [Gordonia neofelifaecis
           NRRL B-59395]
 gi|326197139|gb|EGD54331.1| CMP/dCMP deaminase zinc-binding protein [Gordonia neofelifaecis
           NRRL B-59395]
          Length = 148

 Score = 38.1 bits (87), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 27/90 (30%), Positives = 44/90 (48%), Gaps = 2/90 (2%)

Query: 15  AQNAALRNEIPVGAVAVLNNKIISRAGNRNR-ELKDVTAHAEILAIRMGCRILSQEILPE 73
           A+ A    + P G++ V++     R  +RNR    D T H E    R   + L++E   +
Sbjct: 4   AREALDEGDQPFGSL-VVDAAGDVRFADRNRVSGGDHTRHPEFAIARWAAKNLTEEQRAQ 62

Query: 74  VDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
             +Y + E C MC+AA +   + R+ Y AS
Sbjct: 63  ATVYTSGEHCPMCSAAHAWVGLGRIVYAAS 92


>gi|167762046|ref|ZP_02434173.1| hypothetical protein BACSTE_00394 [Bacteroides stercoris ATCC
           43183]
 gi|167700138|gb|EDS16717.1| hypothetical protein BACSTE_00394 [Bacteroides stercoris ATCC
           43183]
          Length = 347

 Score = 38.1 bits (87), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 44/148 (29%), Positives = 63/148 (42%), Gaps = 21/148 (14%)

Query: 7   FMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
           +M   ++ AQN  L N  P   VGAV V + KII    +    ++   AHAE+ AIR   
Sbjct: 6   YMRRCIQLAQNG-LCNAAPNPMVGAVIVCDGKIIGEGYH----VRCGEAHAEVNAIR--- 57

Query: 64  RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFY 117
            +    +L    +YV+LEPC        CA  I    I R+  G  +P       G +  
Sbjct: 58  SVKDPSLLKRSTIYVSLEPCAHYGKTPPCADLIIEKEIPRIVIGCQDPFAKVAGRGIRKL 117

Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDFF 145
             A      E+  G+ E   R +I+ F 
Sbjct: 118 KDA----GREVITGVLEDECRSLIRRFI 141


>gi|310799415|gb|EFQ34308.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Glomerella graminicola M1.001]
          Length = 247

 Score = 38.1 bits (87), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 30/108 (27%), Positives = 43/108 (39%), Gaps = 21/108 (19%)

Query: 17  NAALRNEIPVGAVA--VLNN------KIISRAGNRNRELKDVTAHAEILAIRMGCRILSQ 68
           N AL N  P  A    V+N+      +++    N+N    + T H E++AI     I   
Sbjct: 69  NLALPNPCPFAAFGSVVVNHTAAGLGELVCTGANKNSVTGNPTFHGEMVAINNCSAIFVD 128

Query: 69  EILP-------------EVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
              P             ++ LY   E C MCA+AI  A  +   YG S
Sbjct: 129 PQGPFKMTPAEALAAFADLTLYTNAESCPMCASAIRWAGFKEYVYGTS 176


>gi|323487730|ref|ZP_08092988.1| hypothetical protein GPDM_00245 [Planococcus donghaensis MPA1U2]
 gi|323398464|gb|EGA91252.1| hypothetical protein GPDM_00245 [Planococcus donghaensis MPA1U2]
          Length = 162

 Score = 38.1 bits (87), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 26/95 (27%), Positives = 42/95 (44%)

Query: 12  LEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEIL 71
           +E A+ A  + + P G+V V     +    + +    D T H E    R     LS E  
Sbjct: 14  VELAETALEKGDEPFGSVLVSETGDVLYEDHNHVAGGDHTQHPEFAIARWAATNLSLEER 73

Query: 72  PEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPK 106
            +  +Y + E C MCAAA     + R+ Y +S+ +
Sbjct: 74  SKATVYTSGEHCPMCAAAHGWVGLGRIVYASSSKQ 108


>gi|89097868|ref|ZP_01170755.1| riboflavin specific deaminase [Bacillus sp. NRRL B-14911]
 gi|89087370|gb|EAR66484.1| riboflavin specific deaminase [Bacillus sp. NRRL B-14911]
          Length = 371

 Score = 38.1 bits (87), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 29/86 (33%), Positives = 43/86 (50%), Gaps = 15/86 (17%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85
           VGAV V + +I     +    LK  T HAE+ AIRM     +  +    ++YVTLEPC+ 
Sbjct: 27  VGAVVVKDGQIAGMGAH----LKAGTQHAEVHAIRM-----ADGLARGAEIYVTLEPCSH 77

Query: 86  ------CAAAISLARIRRLYYGASNP 105
                 CA  I  + I+R+   + +P
Sbjct: 78  HGKTPPCADLIIESGIKRVVIASIDP 103


>gi|294793755|ref|ZP_06758892.1| riboflavin biosynthesis protein RibD [Veillonella sp. 3_1_44]
 gi|294455325|gb|EFG23697.1| riboflavin biosynthesis protein RibD [Veillonella sp. 3_1_44]
          Length = 403

 Score = 38.1 bits (87), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 40/119 (33%), Positives = 56/119 (47%), Gaps = 23/119 (19%)

Query: 6   VFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
           V+M  A+E A+ A      P   VGAV V +N II    +     K  TAHAE+ A+   
Sbjct: 5   VYMKRAIELAKLATGHTS-PNPLVGAVVVKDNTIIGEGYHH----KAGTAHAEVHALNQ- 58

Query: 63  CRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP----KGGGIE 111
               + +      LYVTLEPC+       CA  I  A I ++  G+++P     G G+E
Sbjct: 59  ----AGDNAKGATLYVTLEPCSHYGKTPPCALRIIEAGIAKVIVGSTDPNPLVSGKGME 113


>gi|222148580|ref|YP_002549537.1| hypothetical protein Avi_2145 [Agrobacterium vitis S4]
 gi|221735566|gb|ACM36529.1| conserved hypothetical protein [Agrobacterium vitis S4]
          Length = 195

 Score = 38.1 bits (87), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 19/61 (31%), Positives = 29/61 (47%)

Query: 44  NRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
           N EL +   H E+  ++    +  +    E+    T EPCTMC +AI+ A     YY  S
Sbjct: 51  NNELDNPLWHGEVHTLKRFYELGERPPTSELIFLSTHEPCTMCMSAITWAGFDNFYYFFS 110

Query: 104 N 104
           +
Sbjct: 111 H 111


>gi|325915009|ref|ZP_08177339.1| cytosine/adenosine deaminase [Xanthomonas vesicatoria ATCC 35937]
 gi|325538779|gb|EGD10445.1| cytosine/adenosine deaminase [Xanthomonas vesicatoria ATCC 35937]
          Length = 151

 Score = 38.1 bits (87), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 28/105 (26%), Positives = 43/105 (40%), Gaps = 4/105 (3%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNN-KIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
            +  A+ EA+       IP+GA    N+ +++    NR  +  D + H E  A R   R 
Sbjct: 10  LLDTAIAEARQGLAEGGIPIGAALYHNDGRLLGCGHNRRVQENDPSVHGETDAFRKAGR- 68

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI 110
             Q    +  +  TL PC  C+  +    I  +  G S    GGI
Sbjct: 69  --QRRYKDTIMVTTLAPCWYCSGLVRQFNIGTVVVGESVTFQGGI 111


>gi|269798015|ref|YP_003311915.1| riboflavin biosynthesis protein RibD [Veillonella parvula DSM 2008]
 gi|269094644|gb|ACZ24635.1| riboflavin biosynthesis protein RibD [Veillonella parvula DSM 2008]
          Length = 404

 Score = 38.1 bits (87), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 40/119 (33%), Positives = 56/119 (47%), Gaps = 23/119 (19%)

Query: 6   VFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
           V+M  A+E A+ A      P   VGAV V +N II    +     K  TAHAE+ A+   
Sbjct: 6   VYMKRAIELAKLATGHTS-PNPLVGAVVVKDNTIIGEGYHH----KAGTAHAEVHALNQ- 59

Query: 63  CRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP----KGGGIE 111
               + +      LYVTLEPC+       CA  I  A I ++  G+++P     G G+E
Sbjct: 60  ----AGDNAKGATLYVTLEPCSHYGKTPPCALRIIEAGIAKVIVGSTDPNPLVSGKGME 114


>gi|282850242|ref|ZP_06259621.1| riboflavin biosynthesis protein RibD [Veillonella parvula ATCC
           17745]
 gi|282579735|gb|EFB85139.1| riboflavin biosynthesis protein RibD [Veillonella parvula ATCC
           17745]
          Length = 403

 Score = 38.1 bits (87), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 40/119 (33%), Positives = 56/119 (47%), Gaps = 23/119 (19%)

Query: 6   VFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
           V+M  A+E A+ A      P   VGAV V +N II    +     K  TAHAE+ A+   
Sbjct: 5   VYMKRAIELAKLATGHTS-PNPLVGAVVVKDNTIIGEGYHH----KAGTAHAEVHALNQ- 58

Query: 63  CRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP----KGGGIE 111
               + +      LYVTLEPC+       CA  I  A I ++  G+++P     G G+E
Sbjct: 59  ----AGDNAKGATLYVTLEPCSHYGKTPPCALRIIEAGIAKVIVGSTDPNPLVSGKGME 113


>gi|258510931|ref|YP_003184365.1| riboflavin biosynthesis protein RibD [Alicyclobacillus
           acidocaldarius subsp. acidocaldarius DSM 446]
 gi|257477657|gb|ACV57976.1| riboflavin biosynthesis protein RibD [Alicyclobacillus
           acidocaldarius subsp. acidocaldarius DSM 446]
          Length = 371

 Score = 38.1 bits (87), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 36/128 (28%), Positives = 58/128 (45%), Gaps = 23/128 (17%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85
           VGA+ V   +++ +  +    L   T HAE+ A+RM     + +      LYVTLEPC  
Sbjct: 28  VGAIVVNGGRVVGQGAH----LMAGTPHAEVHALRM-----AGDAAQGATLYVTLEPCNH 78

Query: 86  ------CAAAISLARIRRLYYGA--SNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRS 137
                 C  AI    +RR+   A   +P+  G+  G +    A      E+  G+ E  +
Sbjct: 79  HGRTPPCTDAILATGVRRVVVAALDVDPRTAGL--GVKRLQEAGI----EVTVGVLEAEA 132

Query: 138 RQIIQDFF 145
           R++ + FF
Sbjct: 133 RELNRHFF 140


>gi|9759207|dbj|BAB09649.1| unnamed protein product [Arabidopsis thaliana]
          Length = 438

 Score = 38.1 bits (87), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 16/42 (38%), Positives = 25/42 (59%), Gaps = 6/42 (14%)

Query: 75  DLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGI 110
           D+++ LEPCT+      CA A+   RI+R++Y   N   GG+
Sbjct: 363 DIFLLLEPCTIRDMFPRCAMALVHQRIKRIFYAFPNTTAGGL 404


>gi|294791895|ref|ZP_06757043.1| riboflavin biosynthesis protein RibD [Veillonella sp. 6_1_27]
 gi|294457125|gb|EFG25487.1| riboflavin biosynthesis protein RibD [Veillonella sp. 6_1_27]
          Length = 404

 Score = 38.1 bits (87), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 40/119 (33%), Positives = 56/119 (47%), Gaps = 23/119 (19%)

Query: 6   VFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
           V+M  A+E A+ A      P   VGAV V +N II    +     K  TAHAE+ A+   
Sbjct: 6   VYMKRAIELAKLATGHTS-PNPLVGAVVVKDNTIIGEGYHH----KAGTAHAEVHALNQ- 59

Query: 63  CRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP----KGGGIE 111
               + +      LYVTLEPC+       CA  I  A I ++  G+++P     G G+E
Sbjct: 60  ----AGDNAKGATLYVTLEPCSHYGKTPPCALRIIEAGIAKVIVGSTDPNPLVSGKGME 114


>gi|255947438|ref|XP_002564486.1| Pc22g04480 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211591503|emb|CAP97736.1| Pc22g04480 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 170

 Score = 38.1 bits (87), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 30/93 (32%), Positives = 40/93 (43%), Gaps = 5/93 (5%)

Query: 12  LEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEI 70
           + +AQ   L  + P  A+ +  +N+ I  + N    ++    HAE    R          
Sbjct: 25  VHQAQAQDLHKKRPFAAILLAPDNETILLSSNSLSHVR----HAESELARNAADNYDWAY 80

Query: 71  LPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
           L    L  T EPC MCA AI  A I RL Y AS
Sbjct: 81  LARCTLVSTWEPCAMCAGAIYWAHIGRLVYMAS 113


>gi|120609786|ref|YP_969464.1| CMP/dCMP deaminase [Acidovorax citrulli AAC00-1]
 gi|120588250|gb|ABM31690.1| CMP/dCMP deaminase, zinc-binding protein [Acidovorax citrulli
           AAC00-1]
          Length = 119

 Score = 37.7 bits (86), Expect = 0.47,   Method: Compositional matrix adjust.
 Identities = 22/54 (40%), Positives = 23/54 (42%)

Query: 49  DVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGA 102
           D   HAE    R         IL    L  T EPC MCA  I  A I R+ YGA
Sbjct: 9   DTVNHAESTLAREAAARWPAGILRGCTLVTTFEPCAMCAGTIYWAGIGRVLYGA 62


>gi|229092353|ref|ZP_04223525.1| Riboflavin biosynthesis protein [Bacillus cereus Rock3-42]
 gi|228691055|gb|EEL44822.1| Riboflavin biosynthesis protein [Bacillus cereus Rock3-42]
          Length = 350

 Score = 37.7 bits (86), Expect = 0.47,   Method: Compositional matrix adjust.
 Identities = 38/127 (29%), Positives = 59/127 (46%), Gaps = 19/127 (14%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85
           VG+V V +N+I+    +    +K    HAEI AIRM     + E      +YVTLEPC+ 
Sbjct: 11  VGSVIVNDNRIVGIGAH----MKAGEPHAEIHAIRM-----AGEQARGGTIYVTLEPCSH 61

Query: 86  ------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139
                 CA AI  A I+++     +P       G +    A      E+  G+ E+ S++
Sbjct: 62  HGRTGPCAEAIVQAGIKKVVVATLDPNPLVSGRGIKILQDAGI----EVLVGVCEEESKK 117

Query: 140 IIQDFFK 146
           + + F K
Sbjct: 118 MNEVFNK 124


>gi|148654182|ref|YP_001281275.1| riboflavin biosynthesis protein RibD [Psychrobacter sp. PRwf-1]
 gi|148573266|gb|ABQ95325.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Psychrobacter sp. PRwf-1]
          Length = 368

 Score = 37.7 bits (86), Expect = 0.47,   Method: Compositional matrix adjust.
 Identities = 42/157 (26%), Positives = 69/157 (43%), Gaps = 22/157 (14%)

Query: 2   KKGNVF-MSCALEEAQNAAL--RNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           KK +++ M+ A+EEA+      R    VG V ++NN +I   G   +  +    HAE+ A
Sbjct: 27  KKQDIYYMNLAIEEAKKGLFTTRPNPAVGCV-IVNNNLIVGTGYHPQAGQ---PHAEVFA 82

Query: 59  IRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIEN 112
           +R      +++       YVTLEPC+       CA A+  + + R+     +P       
Sbjct: 83  LRE-----AKDNAKGATAYVTLEPCSHTGRTPPCAQALINSGVSRVVVAGLDPNPKVAGR 137

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
           G      A      E+  G+S Q++ Q+   F K  R
Sbjct: 138 GIAMLKAAGI----EVTVGVSTQQAEQLNLGFLKAMR 170


>gi|169775663|ref|XP_001822298.1| hypothetical protein AOR_1_92134 [Aspergillus oryzae RIB40]
 gi|83771033|dbj|BAE61165.1| unnamed protein product [Aspergillus oryzae]
          Length = 164

 Score = 37.7 bits (86), Expect = 0.47,   Method: Compositional matrix adjust.
 Identities = 22/58 (37%), Positives = 26/58 (44%)

Query: 53  HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI 110
           HAE    R      +++ L E     T EPC MCA  I  A I RL Y AS     G+
Sbjct: 56  HAEAELARNAADNYARDYLAETTFISTWEPCAMCAGTIYWANIGRLVYLASEKALQGV 113


>gi|242374059|ref|ZP_04819633.1| possible diaminohydroxyphosphoribosylaminopyrimidine deaminase
           [Staphylococcus epidermidis M23864:W1]
 gi|242348184|gb|EES39786.1| possible diaminohydroxyphosphoribosylaminopyrimidine deaminase
           [Staphylococcus epidermidis M23864:W1]
          Length = 347

 Score = 37.7 bits (86), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 36/128 (28%), Positives = 55/128 (42%), Gaps = 27/128 (21%)

Query: 7   FMSCALEEAQNAALRNEI--PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           FM+ A++ AQ    +  I  PVG+V V + +I+    +    LK    HAE+ A+ M  +
Sbjct: 4   FMNYAIQLAQMVDGQTGINPPVGSVVVKDGRIVGLGAH----LKKGDKHAEVQALDMAGQ 59

Query: 65  ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP----------KGG 108
                   +  +YV+LEPCT       C   I    I+++ Y   +           K  
Sbjct: 60  AAK-----DATIYVSLEPCTHHGSTPPCVDKIIEFGIKKVIYAIKDTTLVSKGDEILKEA 114

Query: 109 GIENGTQF 116
           GIE   QF
Sbjct: 115 GIEVEFQF 122


>gi|306830959|ref|ZP_07464121.1| riboflavin biosynthesis protein RibD [Streptococcus gallolyticus
           subsp. gallolyticus TX20005]
 gi|304426982|gb|EFM30092.1| riboflavin biosynthesis protein RibD [Streptococcus gallolyticus
           subsp. gallolyticus TX20005]
          Length = 351

 Score = 37.7 bits (86), Expect = 0.49,   Method: Compositional matrix adjust.
 Identities = 40/118 (33%), Positives = 57/118 (48%), Gaps = 21/118 (17%)

Query: 7   FMSCALEEAQNA---ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
           +M+ A+ EA+        N + VGAV V N ++I+R  +    L+    HAE  AI + C
Sbjct: 5   YMAQAIAEAKKGFRQTYTNPL-VGAVIVKNGRVIARGAH----LQYGHEHAEKNAI-LYC 58

Query: 64  RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPK----GGGIE 111
              + E L    LYVTLEPC        C  AI  A I+++  G  +P     G G+E
Sbjct: 59  E--APEELANSTLYVTLEPCHHTGKQPPCTQAIVEAGIKKVVVGQLDPNPLVAGKGLE 114


>gi|269121379|ref|YP_003309556.1| riboflavin biosynthesis protein RibD [Sebaldella termitidis ATCC
           33386]
 gi|268615257|gb|ACZ09625.1| riboflavin biosynthesis protein RibD [Sebaldella termitidis ATCC
           33386]
          Length = 363

 Score = 37.7 bits (86), Expect = 0.49,   Method: Compositional matrix adjust.
 Identities = 43/152 (28%), Positives = 67/152 (44%), Gaps = 29/152 (19%)

Query: 7   FMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           +M  ALE A+      N  P VGAV V +  ++ +  +          HAE+ A+    +
Sbjct: 5   YMEMALEIAEKGLGHVNPNPLVGAVVVKDGTVVGKGYHGVYG----GPHAEVYALDEAGK 60

Query: 65  ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPK----GGGIENGT 114
             S E     D+YVTLEPC+       CA  I  + I+R + G+ +P     G GIE   
Sbjct: 61  --SAE---GADIYVTLEPCSHYGKTPPCAKKIIESGIKRCFVGSIDPNPLVSGKGIE--- 112

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
                    +  E++ G+ ++    I + FFK
Sbjct: 113 -----MLKENDIEVHTGVLKEECDNINKAFFK 139


>gi|326328847|ref|ZP_08195181.1| cytidine/deoxycytidylate deaminase, zinc-binding region
           [Nocardioidaceae bacterium Broad-1]
 gi|325953332|gb|EGD45338.1| cytidine/deoxycytidylate deaminase, zinc-binding region
           [Nocardioidaceae bacterium Broad-1]
          Length = 162

 Score = 37.7 bits (86), Expect = 0.49,   Method: Compositional matrix adjust.
 Identities = 29/94 (30%), Positives = 39/94 (41%), Gaps = 1/94 (1%)

Query: 12  LEEAQNAALRNEIPVGAV-AVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEI 70
           LE A  A    + P G+V A      +    NR     D TAH EI   R     L    
Sbjct: 17  LELAAEALADGDGPFGSVLADSAGNALQEGRNREHTTGDPTAHPEIELARWAAIQLDPAT 76

Query: 71  LPEVDLYVTLEPCTMCAAAISLARIRRLYYGASN 104
                +Y + E C MC+AA   + + R+ Y AS+
Sbjct: 77  RAGATVYTSGEHCPMCSAAHGWSGVGRIVYIASS 110


>gi|163961159|gb|ABY50083.1| cytosine deaminase [Candida tropicalis]
          Length = 120

 Score = 37.7 bits (86), Expect = 0.49,   Method: Compositional matrix adjust.
 Identities = 31/121 (25%), Positives = 48/121 (39%), Gaps = 20/121 (16%)

Query: 33  NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISL 92
           + K++ +  N   +      H E+ A+    R L  +   +  +Y TL PC MC  AI L
Sbjct: 5   DGKVLGKGHNERIQKGSAILHGEMSALEDAGR-LPGKAYKDCTIYTTLSPCNMCTGAILL 63

Query: 93  ARIRRLYYGASNPKGGGIE-----NGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
             I+R+  G  N    G E     NG +   L              +   ++I+  F KE
Sbjct: 64  YGIKRVVMG-ENVNFQGAEDLLRANGVEVINL-------------DDNDCKEIMSKFIKE 109

Query: 148 R 148
           R
Sbjct: 110 R 110


>gi|288929017|ref|ZP_06422863.1| riboflavin biosynthesis protein RibD [Prevotella sp. oral taxon 317
           str. F0108]
 gi|288330001|gb|EFC68586.1| riboflavin biosynthesis protein RibD [Prevotella sp. oral taxon 317
           str. F0108]
          Length = 348

 Score = 37.7 bits (86), Expect = 0.50,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 44/100 (44%), Gaps = 15/100 (15%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85
           VGAV V N++II         +     HAE+ A     R   +  LP   LYV+LEPC+ 
Sbjct: 66  VGAVIVYNDRIIGEG----YHIHCGEGHAEVNAF-AAIRPEDEPFLPHSTLYVSLEPCSH 120

Query: 86  ------CAAAISLARIRRLYYGASNP----KGGGIENGTQ 115
                 CA  I    + R+  G  +P    +G GIE   Q
Sbjct: 121 YGKTPPCADLIIRKGVPRVVVGCVDPFSKVQGRGIEKLRQ 160


>gi|223939370|ref|ZP_03631249.1| riboflavin biosynthesis protein RibD [bacterium Ellin514]
 gi|223891974|gb|EEF58456.1| riboflavin biosynthesis protein RibD [bacterium Ellin514]
          Length = 365

 Score = 37.7 bits (86), Expect = 0.50,   Method: Compositional matrix adjust.
 Identities = 31/87 (35%), Positives = 46/87 (52%), Gaps = 14/87 (16%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPE-VDLYVTLEPCT 84
           VGAV V + K+I R G  +R  +    HAE+ A++      S+   P+   LYVTLEPC 
Sbjct: 21  VGAVLVKHGKVIGR-GWHHRAGQ---PHAEVEALKDAA---SKGNDPKGATLYVTLEPCC 73

Query: 85  M------CAAAISLARIRRLYYGASNP 105
                  C  AI  A+I+++   A++P
Sbjct: 74  THGRTPPCTEAIKAAKIKKVVVAATDP 100


>gi|126663421|ref|ZP_01734418.1| riboflavin biosynthesis protein RibD [Flavobacteria bacterium
           BAL38]
 gi|126624369|gb|EAZ95060.1| riboflavin biosynthesis protein RibD [Flavobacteria bacterium
           BAL38]
          Length = 346

 Score = 37.7 bits (86), Expect = 0.51,   Method: Compositional matrix adjust.
 Identities = 33/126 (26%), Positives = 53/126 (42%), Gaps = 17/126 (13%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85
           VG+V V  NKII    ++    K    HAE+ A+     +  + +L E  +YV+LEPC+ 
Sbjct: 28  VGSVIVYENKIIGEGWHK----KAGEPHAEVNAVN---SVKDKSLLKEATIYVSLEPCSH 80

Query: 86  ------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139
                 C   I +  I  +  G  +P      NG +           ++  GI E    +
Sbjct: 81  FGKTPPCCDLIIVNEIPNVVVGTVDPFAKVAGNGIK----KLVESGKKVTVGILEDECNE 136

Query: 140 IIQDFF 145
           + + FF
Sbjct: 137 LNKRFF 142


>gi|325977849|ref|YP_004287565.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Streptococcus gallolyticus subsp. gallolyticus ATCC
           BAA-2069]
 gi|325177777|emb|CBZ47821.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Streptococcus gallolyticus subsp. gallolyticus ATCC
           BAA-2069]
          Length = 351

 Score = 37.7 bits (86), Expect = 0.52,   Method: Compositional matrix adjust.
 Identities = 40/118 (33%), Positives = 57/118 (48%), Gaps = 21/118 (17%)

Query: 7   FMSCALEEAQNA---ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
           +M+ A+ EA+        N + VGAV V N ++I+R  +    L+    HAE  AI + C
Sbjct: 5   YMAQAIAEAKKGFRQTYTNPL-VGAVIVKNGRVIARGAH----LQYGHEHAEKNAI-LYC 58

Query: 64  RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPK----GGGIE 111
              + E L    LYVTLEPC        C  AI  A I+++  G  +P     G G+E
Sbjct: 59  E--APEELANSTLYVTLEPCHHTGKQPPCTQAIVEAGIKKVVVGQLDPNPLVAGKGLE 114


>gi|327198164|ref|YP_004306740.1| putative dCMP deaminase [Pseudomonas phage KPP10]
 gi|297591690|dbj|BAJ09110.1| putative dCMP deaminase [Pseudomonas phage KPP10]
          Length = 129

 Score = 37.7 bits (86), Expect = 0.52,   Method: Compositional matrix adjust.
 Identities = 32/88 (36%), Positives = 41/88 (46%), Gaps = 16/88 (18%)

Query: 26  VGAVAVLNNKIISRAGN----------RNRE--LKDVTAHAEILAI-RMGCRILSQEILP 72
           VGAV V  NKIIS+  N           N E   +    HAE  A+  + C   SQE   
Sbjct: 18  VGAVIVQGNKIISQGYNGLPGGLEGPLENEEGVTRPEVRHAEKNALLWLSC---SQESAQ 74

Query: 73  EVDLYVTLEPCTMCAAAISLARIRRLYY 100
              ++ T+ PC  CA  I  A I+R+YY
Sbjct: 75  GAWMFATMSPCEYCAHDIVDAGIKRVYY 102


>gi|46446676|ref|YP_008041.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Candidatus Protochlamydia amoebophila UWE25]
 gi|46400317|emb|CAF23766.1| probable diaminohydroxyphosphoribosylaminopyrimidine deaminase /
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Candidatus Protochlamydia amoebophila UWE25]
          Length = 368

 Score = 37.7 bits (86), Expect = 0.52,   Method: Compositional matrix adjust.
 Identities = 44/153 (28%), Positives = 63/153 (41%), Gaps = 23/153 (15%)

Query: 5   NVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           + FM  A+ E+  A L    P   VG V V + KII     +        AHAEI A++ 
Sbjct: 8   HTFMLEAIAESWKARLHAP-PNPWVGCVIVKDQKII----GKGYTYPSGQAHAEINALKS 62

Query: 62  GCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQ 115
                + E      LYVTLEPC+       C  AI  A I  +Y    +P       G Q
Sbjct: 63  -----ASENAKGASLYVTLEPCSHHGKTPPCTEAIIRAGILNVYVALKDPDSRVRGQGIQ 117

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKER 148
               A  H    +  GI E+ ++ ++  +  +R
Sbjct: 118 KLREAGIH----VKVGIGEKEAKVVLTPYLYQR 146


>gi|171691546|ref|XP_001910698.1| hypothetical protein [Podospora anserina S mat+]
 gi|170945721|emb|CAP71834.1| unnamed protein product [Podospora anserina S mat+]
          Length = 233

 Score = 37.7 bits (86), Expect = 0.55,   Method: Compositional matrix adjust.
 Identities = 30/111 (27%), Positives = 40/111 (36%), Gaps = 22/111 (19%)

Query: 12  LEEAQNAALRNEIPVGAVAVL---------NNKIISRAGNRNRELKDVTAHAEILAIRMG 62
           + +A   AL +  P  A   +            +I    N N  + + T H EI AI   
Sbjct: 49  IHQANTLALSHPCPFAAFGTVIVNHTSANPQGTLICTGSNGNSRIGNPTLHGEIAAIN-N 107

Query: 63  CRIL------------SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
           C  L            S     ++ LY   E C MCAAA+  A  R   YG
Sbjct: 108 CSSLFVSSAYNMTPAESLAAFKDLTLYTNAESCLMCAAAVRWAGFREYVYG 158


>gi|167768613|ref|ZP_02440666.1| hypothetical protein CLOSS21_03172 [Clostridium sp. SS2/1]
 gi|167710137|gb|EDS20716.1| hypothetical protein CLOSS21_03172 [Clostridium sp. SS2/1]
          Length = 361

 Score = 37.7 bits (86), Expect = 0.55,   Method: Compositional matrix adjust.
 Identities = 29/81 (35%), Positives = 38/81 (46%), Gaps = 18/81 (22%)

Query: 75  DLYVTLEPCTM------CAAAISLARIRRLYYG--ASNPK--GGGIENGTQFYTLATCHH 124
           ++YVTLEPC        C  A+  A I+++Y G    NPK  GGGI+            H
Sbjct: 61  EIYVTLEPCCHYGKTPPCTEALIEAGIKKVYVGNLDPNPKVAGGGIK--------ILNDH 112

Query: 125 SPEIYPGISEQRSRQIIQDFF 145
             E   GI E+  RQ+   FF
Sbjct: 113 GIETETGILEEECRQLNDIFF 133


>gi|254975336|ref|ZP_05271808.1| riboflavin biosynthesis protein [Clostridium difficile QCD-66c26]
 gi|255092726|ref|ZP_05322204.1| riboflavin biosynthesis protein [Clostridium difficile CIP 107932]
 gi|255314465|ref|ZP_05356048.1| riboflavin biosynthesis protein [Clostridium difficile QCD-76w55]
 gi|255517142|ref|ZP_05384818.1| riboflavin biosynthesis protein [Clostridium difficile QCD-97b34]
 gi|255650247|ref|ZP_05397149.1| riboflavin biosynthesis protein [Clostridium difficile QCD-37x79]
 gi|260683365|ref|YP_003214650.1| riboflavin biosynthesis protein [Clostridium difficile CD196]
 gi|260686960|ref|YP_003218093.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Clostridium difficile R20291]
 gi|306520226|ref|ZP_07406573.1| riboflavin biosynthesis protein [Clostridium difficile QCD-32g58]
 gi|260209528|emb|CBA63111.1| riboflavin biosynthesis protein [Clostridium difficile CD196]
 gi|260212976|emb|CBE04276.1| riboflavin biosynthesis protein [Clostridium difficile R20291]
          Length = 367

 Score = 37.7 bits (86), Expect = 0.55,   Method: Compositional matrix adjust.
 Identities = 40/147 (27%), Positives = 66/147 (44%), Gaps = 21/147 (14%)

Query: 7   FMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           +M  A+E A+N     N  P VG V V ++ II +  +     K  + HAE+ AI     
Sbjct: 10  YMKKAIELAKNGEGFVNPNPLVGCVIVKDSNIIGKGYHE----KFGSNHAEVNAINS--- 62

Query: 65  ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
             +++ L +  LYV LEPC+       C   I   +I+R+     +P      NG +   
Sbjct: 63  --AKQSLKDSTLYVNLEPCSHYGKTPPCVDKIIQNKIKRVVISTLDPNPLVCGNGVKKLK 120

Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFF 145
                ++ ++  GI E  +R + + FF
Sbjct: 121 ----DNNIDVTVGILEDEARDLNEAFF 143


>gi|317497909|ref|ZP_07956219.1| riboflavin biosynthesis protein RibD [Lachnospiraceae bacterium
           5_1_63FAA]
 gi|316894890|gb|EFV17062.1| riboflavin biosynthesis protein RibD [Lachnospiraceae bacterium
           5_1_63FAA]
          Length = 366

 Score = 37.7 bits (86), Expect = 0.55,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 66/151 (43%), Gaps = 29/151 (19%)

Query: 7   FMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           +M  A+E A+      N  P VGAV V + K+I    +     K    HAE  A++  C 
Sbjct: 5   YMRRAIELAKKGCGYTNPNPLVGAVIVKDQKVIGEGYHE----KIGGLHAERNALK-NCI 59

Query: 65  ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYG--ASNPK--GGGIENGT 114
               E     ++YVTLEPC        C  A+  A I+++Y G    NPK  GGGI+   
Sbjct: 60  ----EDPKGAEIYVTLEPCCHYGKTPPCTEALIEAGIKKVYVGNLDPNPKVAGGGIK--- 112

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
                    H  E   GI E+  RQ+   FF
Sbjct: 113 -----ILNDHGIETETGILEEECRQLNDIFF 138


>gi|126699306|ref|YP_001088203.1| riboflavin biosynthesis protein [Clostridium difficile 630]
 gi|255100831|ref|ZP_05329808.1| riboflavin biosynthesis protein [Clostridium difficile QCD-63q42]
 gi|255306720|ref|ZP_05350891.1| riboflavin biosynthesis protein [Clostridium difficile ATCC 43255]
 gi|115250743|emb|CAJ68567.1| Riboflavin biosynthesis protein ribD [Includes:
           Diaminohydroxyphosphoribosylaminopyrimidine deaminase ;
           5-amino-6-(5-phosphoribosylamino)uracil reductase]
           [Clostridium difficile]
          Length = 370

 Score = 37.7 bits (86), Expect = 0.55,   Method: Compositional matrix adjust.
 Identities = 40/147 (27%), Positives = 66/147 (44%), Gaps = 21/147 (14%)

Query: 7   FMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           +M  A+E A+N     N  P VG V V ++ II +  +     K  + HAE+ AI     
Sbjct: 13  YMKKAIELAKNGEGFVNPNPLVGCVIVKDSNIIGKGYHE----KFGSNHAEVNAINS--- 65

Query: 65  ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
             +++ L +  LYV LEPC+       C   I   +I+R+     +P      NG +   
Sbjct: 66  --AKQSLKDSTLYVNLEPCSHYGKTPPCVDKIIQNKIKRVVISTLDPNPLVCGNGVK--- 120

Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFF 145
                ++ ++  GI E  +R + + FF
Sbjct: 121 -KLKDNNIDVTVGILEDEARDLNEAFF 146


>gi|332885428|gb|EGK05677.1| riboflavin biosynthesis protein RibD [Dysgonomonas mossii DSM
          22836]
          Length = 348

 Score = 37.7 bits (86), Expect = 0.56,   Method: Compositional matrix adjust.
 Identities = 24/58 (41%), Positives = 32/58 (55%), Gaps = 7/58 (12%)

Query: 26 VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83
          VGAV V N+KII    +R        AHAE+ AI     +  + +L E  +YV+LEPC
Sbjct: 28 VGAVVVHNDKIIGEGFHREYG----KAHAEVNAI---ASVKDKSLLKESTIYVSLEPC 78


>gi|325922230|ref|ZP_08184016.1| cytosine/adenosine deaminase [Xanthomonas gardneri ATCC 19865]
 gi|325547300|gb|EGD18368.1| cytosine/adenosine deaminase [Xanthomonas gardneri ATCC 19865]
          Length = 151

 Score = 37.7 bits (86), Expect = 0.56,   Method: Compositional matrix adjust.
 Identities = 27/105 (25%), Positives = 43/105 (40%), Gaps = 4/105 (3%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNN-KIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
            +  A+ EA+       IP+GA    N+ +++    NR  +  D + H E  A R   R 
Sbjct: 10  LLDTAIAEARQGLAEGGIPIGAALYHNDGRLLGCGHNRRVQENDPSVHGETDAFRKAGR- 68

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI 110
             Q    +  +  TL PC  C+  +    I  +  G S    GG+
Sbjct: 69  --QRRYKDTIMVTTLAPCWYCSGLVRQFNIGTVVVGESVTFQGGV 111


>gi|218673827|ref|ZP_03523496.1| putative guanine/cytosine deaminase protein [Rhizobium etli GR56]
          Length = 195

 Score = 37.7 bits (86), Expect = 0.56,   Method: Compositional matrix adjust.
 Identities = 18/61 (29%), Positives = 30/61 (49%)

Query: 44  NRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
           N EL++   H E+  ++    +  +    ++    T EPCTMC +AI+ A     YY  S
Sbjct: 51  NNELENPLWHGEVHTLKRFYELGDKPATKDLIFLSTHEPCTMCMSAITWAGFDNFYYFFS 110

Query: 104 N 104
           +
Sbjct: 111 H 111


>gi|150016108|ref|YP_001308362.1| riboflavin biosynthesis protein RibD [Clostridium beijerinckii
           NCIMB 8052]
 gi|149902573|gb|ABR33406.1| riboflavin biosynthesis protein RibD [Clostridium beijerinckii
           NCIMB 8052]
          Length = 361

 Score = 37.7 bits (86), Expect = 0.57,   Method: Compositional matrix adjust.
 Identities = 43/152 (28%), Positives = 65/152 (42%), Gaps = 29/152 (19%)

Query: 7   FMSCALEEAQNAALR-NEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           +M  ALE A+    + N  P VGAV V +N+II    +         AHAE  A++   +
Sbjct: 5   YMEIALELAKRGIGKVNPNPLVGAVIVKDNEIIGEGYHECYG----EAHAERNAVKNATK 60

Query: 65  ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP----KGGGIENGT 114
            +      E  +YVTLEPC        C   I   + +R+  G  +P     G  +E   
Sbjct: 61  SVE-----ESTIYVTLEPCAHYGKTPPCVDLIIEKKFKRVVIGMLDPNELVSGKSVEKLK 115

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
           Q        H  E+  GI E+  +++ + F K
Sbjct: 116 Q--------HGIEVVVGIKEKECKELNEIFIK 139


>gi|251796359|ref|YP_003011090.1| riboflavin biosynthesis protein RibD [Paenibacillus sp. JDR-2]
 gi|247543985|gb|ACT01004.1| riboflavin biosynthesis protein RibD [Paenibacillus sp. JDR-2]
          Length = 368

 Score = 37.7 bits (86), Expect = 0.58,   Method: Compositional matrix adjust.
 Identities = 46/156 (29%), Positives = 68/156 (43%), Gaps = 37/156 (23%)

Query: 7   FMSCALEEAQNAALRNEI--PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           +MS ALE A  A+ +  I   VG V V + +II         LK  T HAE+ A++M   
Sbjct: 9   YMSLALELAAKASGQTGINPVVGCVVVKDGRII----GVGTHLKRGTGHAEVHALQM--- 61

Query: 65  ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPK----GGGI---- 110
             + +      +YVTLEPC+       C   I  A+  R+    ++P     G GI    
Sbjct: 62  --AGDEAEGATVYVTLEPCSHYGKTPPCCERIINAKAARVVVATTDPNPQVAGRGIARLR 119

Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
           E G             E+  G+ E++SR + + F K
Sbjct: 120 EEGI------------EVEVGLLEEQSRSMNEKFNK 143


>gi|167630209|ref|YP_001680708.1| riboflavin biosynthesis protein ribd [Heliobacterium modesticaldum
           Ice1]
 gi|167592949|gb|ABZ84697.1| riboflavin biosynthesis protein ribd [Heliobacterium modesticaldum
           Ice1]
          Length = 374

 Score = 37.7 bits (86), Expect = 0.58,   Method: Compositional matrix adjust.
 Identities = 30/86 (34%), Positives = 41/86 (47%), Gaps = 15/86 (17%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85
           VGAV V + ++I    +R    K  T HAE+ A+R      + E      LYVTLEPC  
Sbjct: 29  VGAVVVKDGRVIGEGYHR----KAGTPHAEVHALRQ-----AGEAACGGTLYVTLEPCNH 79

Query: 86  ------CAAAISLARIRRLYYGASNP 105
                 C  AI  A+I R+    ++P
Sbjct: 80  HGRTPPCTEAIIAAKISRVVAAVADP 105


>gi|313891665|ref|ZP_07825272.1| riboflavin biosynthesis protein RibD [Dialister microaerophilus
           UPII 345-E]
 gi|313119943|gb|EFR43128.1| riboflavin biosynthesis protein RibD [Dialister microaerophilus
           UPII 345-E]
          Length = 378

 Score = 37.7 bits (86), Expect = 0.59,   Method: Compositional matrix adjust.
 Identities = 33/107 (30%), Positives = 50/107 (46%), Gaps = 17/107 (15%)

Query: 7   FMSCALEEAQNAALRNEIP--VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           +MS AL+ A++     E    VGAV V N K+I      +++  DV  HAE+ A +  C+
Sbjct: 9   WMSHALDLAKHGYWYTETNPLVGAVLVKNGKVIGEG--WHKKYGDV--HAEVNAFK-NCK 63

Query: 65  ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP 105
               E      LYVTLEPC        C   +   +++R+     +P
Sbjct: 64  ----ENTEHATLYVTLEPCCHYGKTPPCLNLVLQKKVKRVVIAMKDP 106


>gi|297196280|ref|ZP_06913678.1| cytidine/deoxycytidylate deaminase [Streptomyces pristinaespiralis
           ATCC 25486]
 gi|297153148|gb|EDY66892.2| cytidine/deoxycytidylate deaminase [Streptomyces pristinaespiralis
           ATCC 25486]
          Length = 140

 Score = 37.7 bits (86), Expect = 0.59,   Method: Compositional matrix adjust.
 Identities = 29/95 (30%), Positives = 44/95 (46%), Gaps = 3/95 (3%)

Query: 12  LEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRE--LKDVTAHAEILAIRMGCRILSQE 69
           +E A  A    + P G+V V  +  + RA +RNRE  L D T H E    R     ++ +
Sbjct: 18  VELAAEAVEAGDEPFGSVLVDGDGRV-RAEDRNRETSLADQTQHPEFALARWAAEHMTAQ 76

Query: 70  ILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASN 104
                 ++ + E C MCAAA     + R+ Y  S+
Sbjct: 77  ERRAATVFTSGEHCPMCAAAHGWVGLGRIVYIVSS 111


>gi|325104661|ref|YP_004274315.1| CMP/dCMP deaminase zinc-binding protein [Pedobacter saltans DSM
           12145]
 gi|324973509|gb|ADY52493.1| CMP/dCMP deaminase zinc-binding protein [Pedobacter saltans DSM
           12145]
          Length = 157

 Score = 37.7 bits (86), Expect = 0.60,   Method: Compositional matrix adjust.
 Identities = 41/134 (30%), Positives = 62/134 (46%), Gaps = 27/134 (20%)

Query: 6   VFMSCALEEAQNA-ALRNEIPVGAVAVLNNKIIS------RAGNRN-----------REL 47
           +FM+ A + AQ +  ++N   VGAV   + +IIS       AG  N           R+ 
Sbjct: 8   IFMNLASDLAQKSHCVKNH--VGAVLTKDTRIISIGYNGPPAGTHNCDEEWPEEGCPRDS 65

Query: 48  KD---VTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASN 104
           K+   +  HAE  AI    +  +Q  +    LY TL PC  CA  I  + I+R++Y  S 
Sbjct: 66  KNSCSLALHAEENAILYAVKNGAQ--IQGATLYTTLSPCISCARLIYASGIQRVFYKYSY 123

Query: 105 P--KGGGIENGTQF 116
              KG  ++ G +F
Sbjct: 124 AAYKGLSLDEGVEF 137


>gi|239827589|ref|YP_002950213.1| riboflavin biosynthesis protein RibD [Geobacillus sp. WCH70]
 gi|239807882|gb|ACS24947.1| riboflavin biosynthesis protein RibD [Geobacillus sp. WCH70]
          Length = 361

 Score = 37.7 bits (86), Expect = 0.60,   Method: Compositional matrix adjust.
 Identities = 44/145 (30%), Positives = 64/145 (44%), Gaps = 29/145 (20%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57
           M+    +M  A+E A+ A +    P   VGAV V + +I+    +    LK    HAE+ 
Sbjct: 1   MRNDEQYMRLAIEIAK-AGIGQTSPNPVVGAVVVKDGEIVGFGAH----LKAGELHAEVH 55

Query: 58  AIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGG-GIENGTQF 116
           AIRM     + E      +YVTLEPC+              +YG + P     +E G Q 
Sbjct: 56  AIRM-----AGEKAKGSTVYVTLEPCS--------------HYGKTPPCADLLVETGVQR 96

Query: 117 YTLATCHHSPEIY-PGISEQRSRQI 140
             +AT   +P +   GI + RS  I
Sbjct: 97  VVIATTDPNPLVAGKGIEKLRSAGI 121


>gi|257055207|ref|YP_003133039.1| cytosine/adenosine deaminase [Saccharomonospora viridis DSM 43017]
 gi|256585079|gb|ACU96212.1| cytosine/adenosine deaminase [Saccharomonospora viridis DSM 43017]
          Length = 163

 Score = 37.7 bits (86), Expect = 0.60,   Method: Compositional matrix adjust.
 Identities = 31/99 (31%), Positives = 45/99 (45%), Gaps = 2/99 (2%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNR-ELKDVTAHAEILAIRMGCRI 65
           ++   +E A  A    + P G+V V    ++ RA +RNR    D T H E    R     
Sbjct: 9   YLRRCVELASEALEAGDEPFGSVLVDAEGVV-RAEDRNRIAGGDRTRHPEFELARWSTTA 67

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASN 104
           L+ E      +Y + E C MCAAA     + R+ Y AS+
Sbjct: 68  LTPEERRGATVYTSGEHCPMCAAAHGWVGLGRIVYVASS 106


>gi|18976434|ref|NP_577791.1| riboflavin-specific deaminase [Pyrococcus furiosus DSM 3638]
 gi|18891968|gb|AAL80186.1| riboflavin-specific deaminase [Pyrococcus furiosus DSM 3638]
          Length = 354

 Score = 37.4 bits (85), Expect = 0.61,   Method: Compositional matrix adjust.
 Identities = 38/107 (35%), Positives = 47/107 (43%), Gaps = 14/107 (13%)

Query: 7   FMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           FM  AL  A+    L N  P VGAV V +NKII    ++    K    HAE+ AI    R
Sbjct: 6   FMKLALRLARKGEGLTNPNPMVGAVLVKDNKIIGTGWHKRFGDK----HAEVNAIEDAKR 61

Query: 65  ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP 105
                 +    LYVTLEPC+       CA  I    I R+     +P
Sbjct: 62  --KGYTIEGATLYVTLEPCSHWGKQPPCADRIIEEGISRVVIAMVDP 106


>gi|254469111|ref|ZP_05082516.1| riboflavin biosynthesis protein RibD [Pseudovibrio sp. JE062]
 gi|211960946|gb|EEA96141.1| riboflavin biosynthesis protein RibD [Pseudovibrio sp. JE062]
          Length = 381

 Score = 37.4 bits (85), Expect = 0.61,   Method: Compositional matrix adjust.
 Identities = 33/107 (30%), Positives = 46/107 (42%), Gaps = 13/107 (12%)

Query: 7   FMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           FM+ AL     A  R     PVGA+   +         +   L    +HAE+LAI+    
Sbjct: 18  FMAAALSYGIRAKGRTWPNPPVGAILTKDFGDGPVIVGQGATLPPGGSHAEVLAIKD--- 74

Query: 65  ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP 105
             + E       YVTLEPC        CA A+  A + R+ YG ++P
Sbjct: 75  --AGEHAKGATAYVTLEPCAHYGRTGPCARALVAAGVSRVVYGTADP 119


>gi|238878760|gb|EEQ42398.1| conserved hypothetical protein [Candida albicans WO-1]
          Length = 275

 Score = 37.4 bits (85), Expect = 0.62,   Method: Compositional matrix adjust.
 Identities = 16/41 (39%), Positives = 22/41 (53%)

Query: 76  LYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116
           +Y T EPC MC  A+  +RI R+ Y       GG+E+  Q 
Sbjct: 198 VYTTHEPCVMCCMALVHSRIGRIIYLKPEKSSGGLESHYQL 238


>gi|164658437|ref|XP_001730344.1| hypothetical protein MGL_2726 [Malassezia globosa CBS 7966]
 gi|159104239|gb|EDP43130.1| hypothetical protein MGL_2726 [Malassezia globosa CBS 7966]
          Length = 489

 Score = 37.4 bits (85), Expect = 0.62,   Method: Composition-based stats.
 Identities = 20/71 (28%), Positives = 35/71 (49%), Gaps = 14/71 (19%)

Query: 53  HAEILAIRMGCRILSQE--------------ILPEVDLYVTLEPCTMCAAAISLARIRRL 98
           HA + A+R    I SQ               +L  + +++T EPC  CA A+  +R+R +
Sbjct: 362 HAVLNAVRRVAHIRSQSRSSTNEEAENGQDYLLTGLTMFITHEPCVYCAMALIHSRVRSV 421

Query: 99  YYGASNPKGGG 109
           ++   +P+ GG
Sbjct: 422 FFLFPSPRSGG 432


>gi|258647712|ref|ZP_05735181.1| riboflavin biosynthesis protein RibD [Prevotella tannerae ATCC
           51259]
 gi|260852547|gb|EEX72416.1| riboflavin biosynthesis protein RibD [Prevotella tannerae ATCC
           51259]
          Length = 322

 Score = 37.4 bits (85), Expect = 0.63,   Method: Compositional matrix adjust.
 Identities = 48/162 (29%), Positives = 68/162 (41%), Gaps = 35/162 (21%)

Query: 1   MKKGNVFMSCALEEAQNAALR---NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57
           M+  +++M   L  A+N  L    N + VGAV V  ++II          K   AHAE+ 
Sbjct: 1   MEIKDIYMHRCLRLAENGRLSAPPNPM-VGAVIVYKDRIIGEG----YHAKCGQAHAEVN 55

Query: 58  AIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP----KG 107
           AI    R   +  L +  LYV+LEPC        CA  I    I R+  G  +P    +G
Sbjct: 56  AI-ASVRPDDRPHLQDSTLYVSLEPCAHYGRTPPCARLILNTGIPRVVVGCEDPFDKVEG 114

Query: 108 GGI----ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
            GI    + G Q               G+ EQ  R++ + FF
Sbjct: 115 RGITMLRDGGVQVTV------------GVLEQECRELNRHFF 144


>gi|111024048|ref|YP_707020.1| cytosine/ adenosine deaminase [Rhodococcus jostii RHA1]
 gi|110823578|gb|ABG98862.1| possible cytosine/ adenosine deaminase [Rhodococcus jostii RHA1]
          Length = 109

 Score = 37.4 bits (85), Expect = 0.63,   Method: Compositional matrix adjust.
 Identities = 15/26 (57%), Positives = 17/26 (65%)

Query: 76  LYVTLEPCTMCAAAISLARIRRLYYG 101
           LY T EPC+MCA AI    + RL YG
Sbjct: 78  LYTTAEPCSMCAGAIDWGNVLRLVYG 103


>gi|145223918|ref|YP_001134596.1| CMP/dCMP deaminase, zinc-binding [Mycobacterium gilvum PYR-GCK]
 gi|145216404|gb|ABP45808.1| CMP/dCMP deaminase, zinc-binding protein [Mycobacterium gilvum
           PYR-GCK]
          Length = 163

 Score = 37.4 bits (85), Expect = 0.64,   Method: Compositional matrix adjust.
 Identities = 29/92 (31%), Positives = 47/92 (51%), Gaps = 7/92 (7%)

Query: 14  EAQNAALRNEIPVGAVAVLNNKIISRAGNRNR-ELKDVTAHAEILAIRMGCRILSQEILP 72
           EAQ+A    + P G++ +L+   ++R  +RNR +  D T H E    +     LS +   
Sbjct: 26  EAQDA---GDEPFGSL-LLDADGVTRVEDRNRVKDGDATRHPEYAIAKWAVENLSPDD-- 79

Query: 73  EVDLYVTLEPCTMCAAAISLARIRRLYYGASN 104
              +Y + E C MCAAA +   + R+ Y AS+
Sbjct: 80  RATVYTSGEHCPMCAAAHAWVGLGRVVYAASS 111


>gi|330996373|ref|ZP_08320256.1| riboflavin biosynthesis protein RibD [Paraprevotella xylaniphila
           YIT 11841]
 gi|329573231|gb|EGG54845.1| riboflavin biosynthesis protein RibD [Paraprevotella xylaniphila
           YIT 11841]
          Length = 358

 Score = 37.4 bits (85), Expect = 0.64,   Method: Compositional matrix adjust.
 Identities = 37/114 (32%), Positives = 54/114 (47%), Gaps = 17/114 (14%)

Query: 1   MKKGNVFMSCALEEAQNA---ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57
           M     +MS  ++ A+N    A  N + VGAV V + KII         ++    HAE+ 
Sbjct: 1   MTTDEKYMSRCIQLARNGFYGAAPNPM-VGAVIVHDGKII----GEGYHVRCGGPHAEVN 55

Query: 58  AIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP 105
           AIR    + + E+L E  +YV+LEPC+       CA  I    I R+  G  +P
Sbjct: 56  AIR---SVGNPELLKESTIYVSLEPCSHYGKTPPCADLIVEKGIPRVVVGCMDP 106


>gi|291541288|emb|CBL14399.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase
           /5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Roseburia intestinalis XB6B4]
          Length = 396

 Score = 37.4 bits (85), Expect = 0.64,   Method: Compositional matrix adjust.
 Identities = 40/127 (31%), Positives = 55/127 (43%), Gaps = 24/127 (18%)

Query: 2   KKGNVFM--------SCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAH 53
           +KG +FM        +  L E      +    VGAV V  ++II      +++   + A 
Sbjct: 25  RKGKIFMQQERYMRRAMELAELGRGWTKTNPVVGAVLVKEDRIIGE--GYHKKFGGLHAE 82

Query: 54  AEILAIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGAS--NP 105
            E LA    CR   ++     DLYVTLEPC        C  A+  A I  ++ GA   NP
Sbjct: 83  REALA---DCRSRGED-PAGADLYVTLEPCCHYGKTPPCTQAVIEAGISHVFVGAKDINP 138

Query: 106 --KGGGI 110
              GGGI
Sbjct: 139 LVAGGGI 145


>gi|327440271|dbj|BAK16636.1| pyrimidine deaminase [Solibacillus silvestris StLB046]
          Length = 371

 Score = 37.4 bits (85), Expect = 0.65,   Method: Compositional matrix adjust.
 Identities = 35/113 (30%), Positives = 51/113 (45%), Gaps = 17/113 (15%)

Query: 1   MKKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           MK    +M  ALE A +A    N  P VGAV V +  I+    +R    K    HAE+ A
Sbjct: 1   MKTDQDYMQLALELAASARGNTNPNPLVGAVIVKDGVIVGTGLHR----KAGEPHAEVHA 56

Query: 59  IRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP 105
           + M     + E   +  +YVTLEPC+       CA  +  +  +R+     +P
Sbjct: 57  VNM-----AGEHTKDATIYVTLEPCSHYGKTPPCAKLLKESGFKRVVVATEDP 104


>gi|253571299|ref|ZP_04848706.1| riboflavin biosynthesis protein ribD [Bacteroides sp. 1_1_6]
 gi|251839252|gb|EES67336.1| riboflavin biosynthesis protein ribD [Bacteroides sp. 1_1_6]
          Length = 345

 Score = 37.4 bits (85), Expect = 0.65,   Method: Compositional matrix adjust.
 Identities = 44/147 (29%), Positives = 66/147 (44%), Gaps = 21/147 (14%)

Query: 7   FMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
           +M   +E A+N  L N  P   VGAV V +  II    +    ++   AHAE+ AIR   
Sbjct: 6   YMRRCIELAKNG-LCNVAPNPMVGAVIVCDGLIIGEGYH----IRCGEAHAEVNAIR--- 57

Query: 64  RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFY 117
            +  + +L    +YV+LEPC+       CA  I   +I R+  G  +P       G Q  
Sbjct: 58  SVKDKSLLSRSTIYVSLEPCSHYGKTPPCADLIIEKQIPRIVIGCQDPFSQVAGRGIQKL 117

Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDF 144
             A      E+  G+ E+  R +I+ F
Sbjct: 118 RDA----GREVTVGVLEKECRYLIRRF 140


>gi|187932958|ref|YP_001885493.1| riboflavin biosynthesis protein RibD [Clostridium botulinum B str.
           Eklund 17B]
 gi|187721111|gb|ACD22332.1| riboflavin biosynthesis protein RibD [Clostridium botulinum B str.
           Eklund 17B]
          Length = 378

 Score = 37.4 bits (85), Expect = 0.66,   Method: Compositional matrix adjust.
 Identities = 40/148 (27%), Positives = 66/148 (44%), Gaps = 21/148 (14%)

Query: 7   FMSCALEEAQNAALR-NEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           +M  ALE A+    + N  P VGAV V +N+II    +         AHAE+ AI    +
Sbjct: 20  YMDLALELAKKGIGKVNPNPLVGAVIVKDNEIIGTGYHEYYG----GAHAEVDAINNTTK 75

Query: 65  ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
            L         +Y+TLEPC        C   I   +I+++  G  +P    + +G     
Sbjct: 76  SLEGS-----TIYITLEPCAHYGKTPPCVNLIIEKKIKKVVIGMLDP--NPMVSGKSVKK 128

Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFK 146
           L    +  E+  G+ E++ +++ + F K
Sbjct: 129 LK--ENDIEVIVGVEEEKCKKLNESFIK 154


>gi|308803240|ref|XP_003078933.1| COG1985: Pyrimidine reductase, riboflavin biosynthesis (ISS)
           [Ostreococcus tauri]
 gi|116057386|emb|CAL51813.1| COG1985: Pyrimidine reductase, riboflavin biosynthesis (ISS)
           [Ostreococcus tauri]
          Length = 207

 Score = 37.4 bits (85), Expect = 0.66,   Method: Compositional matrix adjust.
 Identities = 31/103 (30%), Positives = 44/103 (42%), Gaps = 23/103 (22%)

Query: 53  HAEILAIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPK 106
           HAE+ A+R      + E+      YVTLEPC        CA A+  A ++R+  G  +P 
Sbjct: 108 HAEVFALRA-----AGELARGATAYVTLEPCNHFGRTPPCARALVDAGVKRVVVGFVDPD 162

Query: 107 ----GGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
               GGGI+               ++  G  E R R+I  DF 
Sbjct: 163 PRVSGGGIQT--------LLDAGIDVAVGCEEARCREINADFI 197


>gi|68476669|ref|XP_717627.1| potential tRNA wobble position adenosine deaminase subunit [Candida
           albicans SC5314]
 gi|68476816|ref|XP_717553.1| potential tRNA wobble position adenosine deaminase subunit [Candida
           albicans SC5314]
 gi|46439268|gb|EAK98588.1| potential tRNA wobble position adenosine deaminase subunit [Candida
           albicans SC5314]
 gi|46439345|gb|EAK98664.1| potential tRNA wobble position adenosine deaminase subunit [Candida
           albicans SC5314]
          Length = 326

 Score = 37.4 bits (85), Expect = 0.66,   Method: Compositional matrix adjust.
 Identities = 16/41 (39%), Positives = 22/41 (53%)

Query: 76  LYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116
           +Y T EPC MC  A+  +RI R+ Y       GG+E+  Q 
Sbjct: 249 VYTTHEPCVMCCMALVHSRIGRIIYLKPEKSSGGLESHYQL 289


>gi|218458238|ref|ZP_03498329.1| putative guanine/cytosine deaminase protein [Rhizobium etli Kim 5]
          Length = 188

 Score = 37.4 bits (85), Expect = 0.68,   Method: Compositional matrix adjust.
 Identities = 18/61 (29%), Positives = 30/61 (49%)

Query: 44  NRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
           N EL++   H E+  ++    +  +    ++    T EPCTMC +AI+ A     YY  S
Sbjct: 51  NNELENPLWHGEVHTLKRFYELGDKPATKDLIFLSTHEPCTMCMSAITWAGFDNFYYFFS 110

Query: 104 N 104
           +
Sbjct: 111 H 111


>gi|171683047|ref|XP_001906466.1| hypothetical protein [Podospora anserina S mat+]
 gi|170941483|emb|CAP67134.1| unnamed protein product [Podospora anserina S mat+]
          Length = 243

 Score = 37.4 bits (85), Expect = 0.68,   Method: Compositional matrix adjust.
 Identities = 24/79 (30%), Positives = 31/79 (39%), Gaps = 11/79 (13%)

Query: 36  IISRAGNRNRELKDVTAHAEILAIRMGCRIL-----------SQEILPEVDLYVTLEPCT 84
           +I    N+N    + T H E+ AI     I            S     ++ LY   E C 
Sbjct: 90  LICTGANQNSLAGNPTLHGEMAAINNCSSIFVSSAYNMTPAESLAAFKDLSLYTNAESCP 149

Query: 85  MCAAAISLARIRRLYYGAS 103
           MCAAA+  A  R   YG S
Sbjct: 150 MCAAAVRWAGFREYVYGVS 168


>gi|251811149|ref|ZP_04825622.1| possible diaminohydroxyphosphoribosylaminopyrimidine deaminase
           [Staphylococcus epidermidis BCM-HMP0060]
 gi|282875812|ref|ZP_06284679.1| riboflavin biosynthesis protein RibD [Staphylococcus epidermidis
           SK135]
 gi|251805369|gb|EES58026.1| possible diaminohydroxyphosphoribosylaminopyrimidine deaminase
           [Staphylococcus epidermidis BCM-HMP0060]
 gi|281294837|gb|EFA87364.1| riboflavin biosynthesis protein RibD [Staphylococcus epidermidis
           SK135]
 gi|329730651|gb|EGG67035.1| riboflavin biosynthesis protein RibD [Staphylococcus epidermidis
           VCU144]
 gi|329737423|gb|EGG73677.1| riboflavin biosynthesis protein RibD [Staphylococcus epidermidis
           VCU028]
          Length = 347

 Score = 37.4 bits (85), Expect = 0.69,   Method: Compositional matrix adjust.
 Identities = 34/107 (31%), Positives = 46/107 (42%), Gaps = 19/107 (17%)

Query: 7   FMSCALEEAQ--NAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM-GC 63
           FM  A++ A+  N       PVG+V V N +I+    +    LK    HAE+ AI M G 
Sbjct: 4   FMDDAIQLAKMVNGQTGVNPPVGSVVVKNGRIVGLGAH----LKKGDKHAEVQAIEMAGL 59

Query: 64  RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASN 104
                 I      YV+LEPCT       C   I  A I ++ Y   +
Sbjct: 60  NTQGATI------YVSLEPCTHHGSTPPCVDKIIEAGISKVIYAVKD 100


>gi|289663533|ref|ZP_06485114.1| hypothetical protein XcampvN_10764 [Xanthomonas campestris pv.
           vasculorum NCPPB702]
 gi|289670923|ref|ZP_06491998.1| hypothetical protein XcampmN_21153 [Xanthomonas campestris pv.
           musacearum NCPPB4381]
          Length = 186

 Score = 37.4 bits (85), Expect = 0.69,   Method: Compositional matrix adjust.
 Identities = 37/137 (27%), Positives = 60/137 (43%), Gaps = 12/137 (8%)

Query: 17  NAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS----QEIL 71
           N   R+  P GAV    +++II+ A NR        AHAE +A  +  + L      ++L
Sbjct: 41  NVQERSGGPFGAVVFGPDHRIIAAAVNRVVPQTTSLAHAENMAYMLAQQRLQTPRLNDVL 100

Query: 72  PEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPG 131
             V L  + +PC  C  A   A I RL  GA   +   +   TQF         P  + G
Sbjct: 101 APVTLATSAQPCCQCYGATVWAGIDRLLIGA---RADDVMALTQFDEGPL----PADWVG 153

Query: 132 ISEQRSRQIIQDFFKER 148
              +R  ++++D  +++
Sbjct: 154 ELSRRGIEVVRDVLRDQ 170


>gi|57867218|ref|YP_188900.1| riboflavin biosynthesis protein RibD [Staphylococcus epidermidis
           RP62A]
 gi|57637876|gb|AAW54664.1| riboflavin biosynthesis protein RibD [Staphylococcus epidermidis
           RP62A]
          Length = 347

 Score = 37.4 bits (85), Expect = 0.70,   Method: Compositional matrix adjust.
 Identities = 34/107 (31%), Positives = 46/107 (42%), Gaps = 19/107 (17%)

Query: 7   FMSCALEEAQ--NAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM-GC 63
           FM  A++ A+  N       PVG+V V N +I+    +    LK    HAE+ AI M G 
Sbjct: 4   FMDDAIQLAKMVNGQTGVNPPVGSVVVKNGRIVGLGAH----LKKGDKHAEVQAIEMAGL 59

Query: 64  RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASN 104
                 I      YV+LEPCT       C   I  A I ++ Y   +
Sbjct: 60  NTQGATI------YVSLEPCTHHGSTPPCVDKIIEAGISKVIYAVKD 100


>gi|298386833|ref|ZP_06996388.1| riboflavin biosynthesis protein RibD [Bacteroides sp. 1_1_14]
 gi|298260507|gb|EFI03376.1| riboflavin biosynthesis protein RibD [Bacteroides sp. 1_1_14]
          Length = 345

 Score = 37.4 bits (85), Expect = 0.72,   Method: Compositional matrix adjust.
 Identities = 44/147 (29%), Positives = 66/147 (44%), Gaps = 21/147 (14%)

Query: 7   FMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
           +M   +E A+N  L N  P   VGAV V +  II    +    ++   AHAE+ AIR   
Sbjct: 6   YMRRCIELAKNG-LCNVAPNPMVGAVIVCDGLIIGEGYH----IRCGEAHAEVNAIR--- 57

Query: 64  RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFY 117
            +  + +L    +YV+LEPC+       CA  I   +I R+  G  +P       G Q  
Sbjct: 58  SVKDKSLLSRSTIYVSLEPCSHYGKTPPCADLIIEKQIPRIVIGCQDPFSQVAGRGIQKL 117

Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDF 144
             A      E+  G+ E+  R +I+ F
Sbjct: 118 RDA----GREVTIGVLEKECRYLIRRF 140


>gi|218508930|ref|ZP_03506808.1| putative guanine/cytosine deaminase protein [Rhizobium etli Brasil
           5]
          Length = 163

 Score = 37.4 bits (85), Expect = 0.73,   Method: Compositional matrix adjust.
 Identities = 18/61 (29%), Positives = 30/61 (49%)

Query: 44  NRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
           N EL++   H E+  ++    +  +    ++    T EPCTMC +AI+ A     YY  S
Sbjct: 19  NNELENPLWHGEVHTLKRFYELGDKPATRDLIFLSTHEPCTMCMSAITWAGFDNFYYFFS 78

Query: 104 N 104
           +
Sbjct: 79  H 79


>gi|241204550|ref|YP_002975646.1| CMP/dCMP deaminase zinc-binding [Rhizobium leguminosarum bv.
           trifolii WSM1325]
 gi|240858440|gb|ACS56107.1| CMP/dCMP deaminase zinc-binding [Rhizobium leguminosarum bv.
           trifolii WSM1325]
          Length = 195

 Score = 37.4 bits (85), Expect = 0.74,   Method: Compositional matrix adjust.
 Identities = 18/61 (29%), Positives = 30/61 (49%)

Query: 44  NRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
           N EL++   H E+  ++    +  +    ++    T EPCTMC +AI+ A     YY  S
Sbjct: 51  NNELENPLWHGEVHTLKRFYELGDKPPTKDLIFLSTHEPCTMCMSAITWAGFDNFYYFFS 110

Query: 104 N 104
           +
Sbjct: 111 H 111


>gi|190571227|ref|YP_001975585.1| riboflavin biosynthesis protein RibD [Wolbachia endosymbiont of
           Culex quinquefasciatus Pel]
 gi|190357499|emb|CAQ54935.1| riboflavin biosynthesis protein RibD [Wolbachia endosymbiont of
           Culex quinquefasciatus Pel]
          Length = 405

 Score = 37.4 bits (85), Expect = 0.75,   Method: Compositional matrix adjust.
 Identities = 37/124 (29%), Positives = 58/124 (46%), Gaps = 31/124 (25%)

Query: 5   NVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRA----GNRNRELKDVTAHAEIL 57
           + FMS AL+ A+ + L +  P   VG + V N  +I       G R         HAE++
Sbjct: 4   DYFMSIALKLAEKS-LGSVAPNPAVGCIIVKNGMVIGEGYTGIGGR--------PHAEVV 54

Query: 58  AIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPK----G 107
           A++      ++++     +YVTLEPC        C A I  + I+R+   A +P     G
Sbjct: 55  ALQN-----AKDLTHSATMYVTLEPCCHFGVTEPCTAEIIKSGIKRVVIAAIDPDSRVSG 109

Query: 108 GGIE 111
           GGI+
Sbjct: 110 GGIK 113


>gi|260910408|ref|ZP_05917080.1| riboflavin biosynthesis protein RibD [Prevotella sp. oral taxon 472
           str. F0295]
 gi|260635484|gb|EEX53502.1| riboflavin biosynthesis protein RibD [Prevotella sp. oral taxon 472
           str. F0295]
          Length = 351

 Score = 37.4 bits (85), Expect = 0.76,   Method: Compositional matrix adjust.
 Identities = 31/97 (31%), Positives = 45/97 (46%), Gaps = 15/97 (15%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85
           VGAV V  ++II    +    +     HAE+ A     R   + +LP+  LYV+LEPC+ 
Sbjct: 74  VGAVIVYRDRIIGEGYH----VHCGEGHAEVNAF-AAVRPEDESLLPQSTLYVSLEPCSH 128

Query: 86  ------CAAAISLARIRRLYYGASNP----KGGGIEN 112
                 CA  I    + R+  G  +P    +G GIE 
Sbjct: 129 YGKTPPCADLIIRKEVARVVVGCIDPFAKVQGRGIEK 165


>gi|115385499|ref|XP_001209296.1| hypothetical protein ATEG_09994 [Aspergillus terreus NIH2624]
 gi|114187743|gb|EAU29443.1| hypothetical protein ATEG_09994 [Aspergillus terreus NIH2624]
          Length = 163

 Score = 37.4 bits (85), Expect = 0.77,   Method: Compositional matrix adjust.
 Identities = 22/51 (43%), Positives = 23/51 (45%)

Query: 53  HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
           HAE    R      + E L    L  T EPC MCA  I  A I RL Y AS
Sbjct: 56  HAECELARNAADNFAPEYLARSTLVSTWEPCAMCAGTIYWANIGRLVYLAS 106


>gi|21230291|ref|NP_636208.1| hypothetical protein XCC0817 [Xanthomonas campestris pv. campestris
           str. ATCC 33913]
 gi|66769715|ref|YP_244477.1| hypothetical protein XC_3413 [Xanthomonas campestris pv. campestris
           str. 8004]
 gi|188992931|ref|YP_001904941.1| hypothetical protein xccb100_3536 [Xanthomonas campestris pv.
           campestris str. B100]
 gi|21111839|gb|AAM40132.1| conserved hypothetical protein [Xanthomonas campestris pv.
           campestris str. ATCC 33913]
 gi|66575047|gb|AAY50457.1| conserved hypothetical protein [Xanthomonas campestris pv.
           campestris str. 8004]
 gi|167734691|emb|CAP52901.1| Conserved hypothetical protein [Xanthomonas campestris pv.
           campestris]
          Length = 186

 Score = 37.4 bits (85), Expect = 0.77,   Method: Compositional matrix adjust.
 Identities = 30/91 (32%), Positives = 42/91 (46%), Gaps = 5/91 (5%)

Query: 17  NAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS----QEIL 71
           N   R+  P GAV    +++II+ A NR        AHAE +A  +  + L      ++L
Sbjct: 41  NVEARSGGPFGAVVFGPDDRIIAAAVNRVVPQNTSLAHAENMAYMLAQQRLQTPRLNDVL 100

Query: 72  PEVDLYVTLEPCTMCAAAISLARIRRLYYGA 102
             V L  + +PC  C  A   A I RL  GA
Sbjct: 101 SPVTLATSAQPCCQCYGATVWAGIDRLLIGA 131


>gi|27468359|ref|NP_764996.1| riboflavin specific deaminase [Staphylococcus epidermidis ATCC
           12228]
 gi|27315905|gb|AAO05040.1|AE016748_274 riboflavin specific deaminase [Staphylococcus epidermidis ATCC
           12228]
          Length = 347

 Score = 37.4 bits (85), Expect = 0.77,   Method: Compositional matrix adjust.
 Identities = 34/107 (31%), Positives = 46/107 (42%), Gaps = 19/107 (17%)

Query: 7   FMSCALEEAQ--NAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM-GC 63
           FM  A++ A+  N       PVG+V V N +I+    +    LK    HAE+ AI M G 
Sbjct: 4   FMDDAIQLAKMVNGQTGVNPPVGSVVVKNGRIVGLGAH----LKKGDKHAEVQAIEMAGL 59

Query: 64  RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASN 104
                 I      YV+LEPCT       C   I  A I ++ Y   +
Sbjct: 60  NTQGATI------YVSLEPCTHHGSTPPCVHKIIEAGISKVIYAVKD 100


>gi|295698401|ref|YP_003603056.1| riboflavin biosynthesis protein RibD [Candidatus Riesia
           pediculicola USDA]
 gi|291157057|gb|ADD79502.1| riboflavin biosynthesis protein RibD [Candidatus Riesia
           pediculicola USDA]
          Length = 373

 Score = 37.4 bits (85), Expect = 0.77,   Method: Compositional matrix adjust.
 Identities = 31/108 (28%), Positives = 49/108 (45%), Gaps = 19/108 (17%)

Query: 7   FMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
           FMS A+  A+        P   VG V V NN+I+  + +     K   +HAE+LA++   
Sbjct: 8   FMSRAIFLAKKGKFTTS-PNPNVGCVIVQNNRIVGESYHS----KTGESHAEVLAMKKAG 62

Query: 64  RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP 105
             L         +YVTLEPC        C   +  A+I +++   ++P
Sbjct: 63  HFLKG-----ATVYVTLEPCNHYGLTPPCVDELINAKISKIFVSMTDP 105


>gi|238019274|ref|ZP_04599700.1| hypothetical protein VEIDISOL_01138 [Veillonella dispar ATCC 17748]
 gi|237863973|gb|EEP65263.1| hypothetical protein VEIDISOL_01138 [Veillonella dispar ATCC 17748]
          Length = 404

 Score = 37.4 bits (85), Expect = 0.77,   Method: Compositional matrix adjust.
 Identities = 30/86 (34%), Positives = 42/86 (48%), Gaps = 15/86 (17%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85
           VGAV V +N II    +     K  TAHAE+ A+       + +      LYVTLEPC+ 
Sbjct: 28  VGAVVVKDNTIIGEGYHH----KAGTAHAEVHALNQ-----AGDNAKGATLYVTLEPCSH 78

Query: 86  ------CAAAISLARIRRLYYGASNP 105
                 CA  I  A I ++  G+++P
Sbjct: 79  YGKTPPCALRIIEAGIAKVVVGSTDP 104


>gi|312885990|ref|ZP_07745618.1| CMP/dCMP deaminase zinc-binding [Mucilaginibacter paludis DSM
           18603]
 gi|311301527|gb|EFQ78568.1| CMP/dCMP deaminase zinc-binding [Mucilaginibacter paludis DSM
           18603]
          Length = 150

 Score = 37.4 bits (85), Expect = 0.78,   Method: Compositional matrix adjust.
 Identities = 42/138 (30%), Positives = 60/138 (43%), Gaps = 33/138 (23%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIIS------RAGNRN-----------REL 47
           ++FM+ AL+ AQ +    +  VGAV   + +IIS       AG  N           R+ 
Sbjct: 8   HIFMNLALDLAQRSHCV-KAQVGAVLAKDTRIISIGYNGPPAGTHNCDEEWPETGCARDA 66

Query: 48  K---DVTAHAE----ILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
           K    +  HAE    + A++ G R      L    LY TL PC  CA  I  A I+ +Y+
Sbjct: 67  KGSCSLALHAEENAILYAVKNGAR------LEGATLYTTLSPCLPCARLIFSAGIKHVYF 120

Query: 101 GASNP--KGGGIENGTQF 116
             S    KG   + G +F
Sbjct: 121 KKSYAAYKGLPFDEGVEF 138


>gi|303258272|ref|ZP_07344279.1| riboflavin biosynthesis protein RibD [Burkholderiales bacterium
           1_1_47]
 gi|302859025|gb|EFL82109.1| riboflavin biosynthesis protein RibD [Burkholderiales bacterium
           1_1_47]
          Length = 363

 Score = 37.4 bits (85), Expect = 0.79,   Method: Compositional matrix adjust.
 Identities = 43/157 (27%), Positives = 68/157 (43%), Gaps = 30/157 (19%)

Query: 7   FMSCALEEAQNAALRNEIP----VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
           +M  ALE A+ A  R   P    VG V V + +II     +    K   AHAE++A+R  
Sbjct: 8   YMRRALELAKKA--RFNCPPNPAVGCVIVKDRRIIGEGFTQ----KTGEAHAEVMALRDA 61

Query: 63  CRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPK----GGGIEN 112
                 E +    +YVTLEPC+       CA A+  A++ R+     +P     G G++ 
Sbjct: 62  AS--RGESVEGATVYVTLEPCSHYGRTPPCALALKNAKVARVVAALKDPNPLVAGKGLKM 119

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +      C        G+  + + +I + F K +R
Sbjct: 120 LEEAGVKVEC--------GLEAEEAEEINRGFLKRQR 148


>gi|253578467|ref|ZP_04855739.1| riboflavin biosynthesis protein [Ruminococcus sp. 5_1_39B_FAA]
 gi|251850785|gb|EES78743.1| riboflavin biosynthesis protein [Ruminococcus sp. 5_1_39BFAA]
          Length = 375

 Score = 37.4 bits (85), Expect = 0.79,   Method: Compositional matrix adjust.
 Identities = 41/114 (35%), Positives = 52/114 (45%), Gaps = 19/114 (16%)

Query: 1   MKKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           M+K   +M  ALE AQ         P VGAV V   K+I +  +R    K    HAE  A
Sbjct: 7   MEKDRQYMKMALELAQKGMGFTAPNPMVGAVIVKRGKVIGQGYHR----KYGEPHAEREA 62

Query: 59  IRMGCRILSQEILPE-VDLYVTLEPCTM------CAAAISLARIRRLYYGASNP 105
           +       S    PE   +YVTLEPC        C  AI  + IRR+  G+S+P
Sbjct: 63  L------ASCTEQPEGASIYVTLEPCCHYGKQPPCVNAILESGIRRVIIGSSDP 110


>gi|34540017|ref|NP_904496.1| riboflavin biosynthesis protein RibD [Porphyromonas gingivalis
          W83]
 gi|34396328|gb|AAQ65395.1| riboflavin biosynthesis protein RibD [Porphyromonas gingivalis
          W83]
          Length = 330

 Score = 37.0 bits (84), Expect = 0.79,   Method: Compositional matrix adjust.
 Identities = 30/86 (34%), Positives = 45/86 (52%), Gaps = 9/86 (10%)

Query: 1  MKKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
          M    ++M  A+E AQNA    +  P VGAV V + +II    +    +     HAE++A
Sbjct: 1  MTPDPLYMRRAIELAQNAEGFTSPNPLVGAVLVAHGRIIGEGYHHCAGMP----HAEVIA 56

Query: 59 IRMGCRILSQEILPEVDLYVTLEPCT 84
          I     +  + +L E  LYV+LEPC+
Sbjct: 57 IN---SVRDRALLRESTLYVSLEPCS 79


>gi|154482616|ref|ZP_02025064.1| hypothetical protein EUBVEN_00283 [Eubacterium ventriosum ATCC
           27560]
 gi|149736516|gb|EDM52402.1| hypothetical protein EUBVEN_00283 [Eubacterium ventriosum ATCC
           27560]
          Length = 163

 Score = 37.0 bits (84), Expect = 0.80,   Method: Compositional matrix adjust.
 Identities = 40/113 (35%), Positives = 50/113 (44%), Gaps = 33/113 (29%)

Query: 15  AQNAALRNEIP---VGAVAVLN-NKIISRAGN------------RNRELKD-------VT 51
           A  AALR++ P   VGA  V + NKI+S   N             NRE  D        T
Sbjct: 20  ASLAALRSKDPNTQVGACIVSDDNKILSMGYNGLPVGCSDDEFPWNRESDDPYDNKYFYT 79

Query: 52  AHAEILAI---RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
            H+E+ AI   R G        L    +YVTL PC  CA AI    I+++ YG
Sbjct: 80  THSELNAILNYRGGS-------LEGAKIYVTLFPCNECAKAIIQCGIKKVIYG 125


>gi|295135421|ref|YP_003586097.1| bifunctional riboflavin biosynthesis protein RibD [Zunongwangia
           profunda SM-A87]
 gi|294983436|gb|ADF53901.1| bifunctional riboflavin biosynthesis protein RibD [Zunongwangia
           profunda SM-A87]
          Length = 348

 Score = 37.0 bits (84), Expect = 0.81,   Method: Compositional matrix adjust.
 Identities = 31/126 (24%), Positives = 59/126 (46%), Gaps = 17/126 (13%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85
           VG+V V  N+II    ++    K    HAE+ A+     + ++++L +  +YV+LEPC+ 
Sbjct: 30  VGSVIVYKNQIIGEGWHQ----KAGEPHAEVNAVN---SVKNRDLLKKSTIYVSLEPCSH 82

Query: 86  ------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139
                 C+  I    I+++     +P       G +    A C    ++  G+ EQ ++ 
Sbjct: 83  FGKTPPCSDLIIAKGIKKVVVATVDPFAEVAGRGIKKLMEAGC----DVTLGVLEQEAQH 138

Query: 140 IIQDFF 145
           + + FF
Sbjct: 139 LNKRFF 144


>gi|260642492|ref|ZP_05859416.1| riboflavin biosynthesis protein RibD [Bacteroides finegoldii DSM
           17565]
 gi|260621884|gb|EEX44755.1| riboflavin biosynthesis protein RibD [Bacteroides finegoldii DSM
           17565]
          Length = 373

 Score = 37.0 bits (84), Expect = 0.81,   Method: Compositional matrix adjust.
 Identities = 43/148 (29%), Positives = 65/148 (43%), Gaps = 21/148 (14%)

Query: 7   FMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
           +M   +E A+N  L N  P   VGAV V + +II         ++   AHAE+ AIR   
Sbjct: 34  YMRRCIELAKNG-LCNVAPNPMVGAVIVCDGRIIGEG----YHVRCGEAHAEVNAIR--- 85

Query: 64  RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFY 117
            +  + +L    +YV+LEPC+       CA  I   +I R+  G  +P       G Q  
Sbjct: 86  SVKDESLLKRSTIYVSLEPCSHYGKTPPCADLIIEKQIPRIVIGCRDPFSKVAGRGIQKL 145

Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDFF 145
             A      E+  G+ E+    +I+ F 
Sbjct: 146 QNA----GREVIVGVLEEECLHLIRRFI 169


>gi|169605061|ref|XP_001795951.1| hypothetical protein SNOG_05546 [Phaeosphaeria nodorum SN15]
 gi|160706699|gb|EAT86610.2| hypothetical protein SNOG_05546 [Phaeosphaeria nodorum SN15]
          Length = 393

 Score = 37.0 bits (84), Expect = 0.82,   Method: Compositional matrix adjust.
 Identities = 15/42 (35%), Positives = 25/42 (59%)

Query: 73  EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           ++D+Y+T EPC MC+ AI  +R RR  +       GG+ + +
Sbjct: 296 DLDIYLTNEPCVMCSMAILHSRFRRCIFSTRMSHTGGMTSDS 337


>gi|154250091|ref|YP_001410916.1| riboflavin biosynthesis protein RibD [Fervidobacterium nodosum
           Rt17-B1]
 gi|154154027|gb|ABS61259.1| riboflavin biosynthesis protein RibD [Fervidobacterium nodosum
           Rt17-B1]
          Length = 365

 Score = 37.0 bits (84), Expect = 0.82,   Method: Compositional matrix adjust.
 Identities = 34/131 (25%), Positives = 57/131 (43%), Gaps = 23/131 (17%)

Query: 25  PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84
           PVGAV V + KI+S   ++          A + A+  G  I          +YVTLEPC 
Sbjct: 33  PVGAVIVKDGKILSMGYHKYYGGYHAERDAILSALNAGIDISGST------MYVTLEPCD 86

Query: 85  M------CAAAISLARIRRLYYGASNP---KGGGIENGTQFYTLATCHHSPEIYPGISEQ 135
                  C   I  + I+ +Y   ++P    G G E   +        +  +++ G+ E+
Sbjct: 87  HYGKTPPCTDLIIQSGIKEVYIACTDPNPISGNGAEKLRK--------NGVDVHIGLLEE 138

Query: 136 RSRQIIQDFFK 146
            +R++ + FFK
Sbjct: 139 EARELAKFFFK 149


>gi|304407004|ref|ZP_07388658.1| riboflavin biosynthesis protein RibD [Paenibacillus curdlanolyticus
           YK9]
 gi|304343991|gb|EFM09831.1| riboflavin biosynthesis protein RibD [Paenibacillus curdlanolyticus
           YK9]
          Length = 373

 Score = 37.0 bits (84), Expect = 0.83,   Method: Compositional matrix adjust.
 Identities = 38/119 (31%), Positives = 52/119 (43%), Gaps = 22/119 (18%)

Query: 7   FMSCALEEAQNAALRNEI--PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           +M  AL+ AQ A  +  I   VG V V   +II    +    LK    HAE+ A+RM   
Sbjct: 10  YMRLALQMAQGATGQTSINPVVGCVIVKEGRIIGMGAH----LKRGEGHAEVNALRM--- 62

Query: 65  ILSQEILPEVDLYVTLEPCTM-------CAAAISLARIRRLYYGASNPK----GGGIEN 112
             + +       YVTLEPC+        C   +  ARI R+   A +P     G G+E 
Sbjct: 63  --AGDEAEGATAYVTLEPCSHYRKKTPPCCDRLIEARIARVVVAAQDPNPQVAGTGVEK 119


>gi|313894496|ref|ZP_07828060.1| riboflavin biosynthesis protein RibD [Veillonella sp. oral taxon
           158 str. F0412]
 gi|313440892|gb|EFR59320.1| riboflavin biosynthesis protein RibD [Veillonella sp. oral taxon
           158 str. F0412]
          Length = 404

 Score = 37.0 bits (84), Expect = 0.84,   Method: Compositional matrix adjust.
 Identities = 30/86 (34%), Positives = 42/86 (48%), Gaps = 15/86 (17%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85
           VGAV V +N II    +     K  TAHAE+ A+       + +      LYVTLEPC+ 
Sbjct: 28  VGAVVVKDNTIIGEGYHH----KAGTAHAEVHALNQ-----AGDNAKGATLYVTLEPCSH 78

Query: 86  ------CAAAISLARIRRLYYGASNP 105
                 CA  I  A I ++  G+++P
Sbjct: 79  YGKTPPCALRIIEAGIAKVVVGSTDP 104


>gi|196248758|ref|ZP_03147458.1| riboflavin biosynthesis protein RibD [Geobacillus sp. G11MC16]
 gi|196211634|gb|EDY06393.1| riboflavin biosynthesis protein RibD [Geobacillus sp. G11MC16]
          Length = 366

 Score = 37.0 bits (84), Expect = 0.84,   Method: Compositional matrix adjust.
 Identities = 35/108 (32%), Positives = 51/108 (47%), Gaps = 19/108 (17%)

Query: 7   FMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
           +M  AL+ A+ A +    P   VGAV V +  I+    +    LK    HAE+ AIRM  
Sbjct: 7   YMRLALDVAK-AGVGQTSPNPAVGAVVVNDGTIVGIGAH----LKAGEPHAEVHAIRM-- 59

Query: 64  RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP 105
              + E      +YVTLEPC+       CA  +  A +RR+    ++P
Sbjct: 60  ---AGEKARGATVYVTLEPCSHYGKTPPCADLLIEAGVRRVVVATTDP 104


>gi|116252043|ref|YP_767881.1| guanine/cytosine deaminase [Rhizobium leguminosarum bv. viciae
           3841]
 gi|115256691|emb|CAK07779.1| putative guanine/cytosine deaminase [Rhizobium leguminosarum bv.
           viciae 3841]
          Length = 195

 Score = 37.0 bits (84), Expect = 0.84,   Method: Compositional matrix adjust.
 Identities = 22/86 (25%), Positives = 40/86 (46%), Gaps = 1/86 (1%)

Query: 19  ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYV 78
           +L N++  GA  +  + +       N EL++   H E+  ++    +  +    ++    
Sbjct: 27  SLGNKV-FGAAILRKSDLSLVVAETNNELENPLWHGEVHTLKRFYELGDKPPTKDLIFLS 85

Query: 79  TLEPCTMCAAAISLARIRRLYYGASN 104
           T EPCTMC +AI+ A     YY  S+
Sbjct: 86  THEPCTMCMSAITWAGFDNFYYFFSH 111


>gi|329735920|gb|EGG72197.1| riboflavin biosynthesis protein RibD [Staphylococcus epidermidis
           VCU045]
          Length = 347

 Score = 37.0 bits (84), Expect = 0.85,   Method: Compositional matrix adjust.
 Identities = 34/107 (31%), Positives = 46/107 (42%), Gaps = 19/107 (17%)

Query: 7   FMSCALEEAQ--NAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM-GC 63
           FM  A++ A+  N       PVG+V V N +I+    +    LK    HAE+ AI M G 
Sbjct: 4   FMDDAIQLAKMVNGQTGVNPPVGSVVVKNGRIVGLGAH----LKKGDKHAEVQAIEMAGL 59

Query: 64  RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASN 104
                 I      YV+LEPCT       C   I  A I ++ Y   +
Sbjct: 60  NTQGATI------YVSLEPCTHHGSTPPCVHKIIEAGISKVIYAVKD 100


>gi|299538422|ref|ZP_07051705.1| riboflavin biosynthesis protein ribD [Lysinibacillus fusiformis
           ZC1]
 gi|298726009|gb|EFI66601.1| riboflavin biosynthesis protein ribD [Lysinibacillus fusiformis
           ZC1]
          Length = 370

 Score = 37.0 bits (84), Expect = 0.85,   Method: Compositional matrix adjust.
 Identities = 43/147 (29%), Positives = 63/147 (42%), Gaps = 21/147 (14%)

Query: 7   FMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           +M  AL+ A +A    N  P VGAV V N  I+    +R    K    HAE+ A RM   
Sbjct: 8   YMQLALDLAASAKGNTNPNPLVGAVIVKNGVIVGTGLHR----KAGEPHAEVHAFRM--- 60

Query: 65  ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
             + E      LYVTLEPC+       CA  +  + + R+     +P       G Q   
Sbjct: 61  --AGEHAMGATLYVTLEPCSHYGKTPPCANLVKESGVSRVVVAMQDPNPAVAGRGIQLLQ 118

Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFF 145
            A       +  G+ EQ++R++ + F 
Sbjct: 119 DAGI----VVEVGVLEQQARRLNERFI 141


>gi|209549234|ref|YP_002281151.1| CMP/dCMP deaminase zinc-binding [Rhizobium leguminosarum bv.
           trifolii WSM2304]
 gi|209534990|gb|ACI54925.1| CMP/dCMP deaminase zinc-binding [Rhizobium leguminosarum bv.
           trifolii WSM2304]
          Length = 195

 Score = 37.0 bits (84), Expect = 0.85,   Method: Compositional matrix adjust.
 Identities = 22/86 (25%), Positives = 39/86 (45%), Gaps = 1/86 (1%)

Query: 19  ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYV 78
           +L N++  GA  +  + +       N EL +   H E+  ++    +  +    ++    
Sbjct: 27  SLGNKV-FGAAILRKSDLSLVVAETNNELDNPLWHGEVHTLKRFYELGEKPATKDLIFLS 85

Query: 79  TLEPCTMCAAAISLARIRRLYYGASN 104
           T EPCTMC +AI+ A     YY  S+
Sbjct: 86  THEPCTMCMSAITWAGFDNFYYFFSH 111


>gi|188994131|ref|YP_001928383.1| putative riboflavin biosynthesis protein [Porphyromonas
          gingivalis ATCC 33277]
 gi|188593811|dbj|BAG32786.1| putative riboflavin biosynthesis protein [Porphyromonas
          gingivalis ATCC 33277]
          Length = 330

 Score = 37.0 bits (84), Expect = 0.86,   Method: Compositional matrix adjust.
 Identities = 30/86 (34%), Positives = 45/86 (52%), Gaps = 9/86 (10%)

Query: 1  MKKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
          M    ++M  A+E AQNA    +  P VGAV V + +II    +    +     HAE++A
Sbjct: 1  MTPDPLYMRRAIELAQNAEGFTSPNPLVGAVLVAHGRIIGEGYHHCAGMP----HAEVIA 56

Query: 59 IRMGCRILSQEILPEVDLYVTLEPCT 84
          I     +  + +L E  LYV+LEPC+
Sbjct: 57 IN---SVRDRALLRESTLYVSLEPCS 79


>gi|58583602|ref|YP_202618.1| cytosine deaminase [Xanthomonas oryzae pv. oryzae KACC10331]
 gi|84625409|ref|YP_452781.1| cytosine deaminase [Xanthomonas oryzae pv. oryzae MAFF 311018]
 gi|188575147|ref|YP_001912076.1| cytosine deaminase [Xanthomonas oryzae pv. oryzae PXO99A]
 gi|58428196|gb|AAW77233.1| cytosine deaminase [Xanthomonas oryzae pv. oryzae KACC10331]
 gi|84369349|dbj|BAE70507.1| cytosine deaminase [Xanthomonas oryzae pv. oryzae MAFF 311018]
 gi|188519599|gb|ACD57544.1| cytosine deaminase [Xanthomonas oryzae pv. oryzae PXO99A]
          Length = 151

 Score = 37.0 bits (84), Expect = 0.86,   Method: Compositional matrix adjust.
 Identities = 28/105 (26%), Positives = 43/105 (40%), Gaps = 4/105 (3%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNN-KIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
            +  A+ EA+       IP+GA    N+ +++    NR  +  D + H E  A R   R 
Sbjct: 10  LLDTAIIEARQGLAEGGIPIGAALYHNDGRLLGCGHNRRVQENDPSVHGETDAFRKAGR- 68

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI 110
             Q    +  +  TL PC  C+  +    I  +  G S    GGI
Sbjct: 69  --QRRYKDTIMVTTLAPCWYCSGLVRQFNIGTVVVGESLTFQGGI 111


>gi|39996788|ref|NP_952739.1| riboflavin biosynthesis protein RibD [Geobacter sulfurreducens PCA]
 gi|39983676|gb|AAR35066.1| riboflavin biosynthesis protein RibD [Geobacter sulfurreducens PCA]
 gi|307634902|gb|ADI84522.2| 2,5-diamino-6-(5'-phosphoribosylamino)-4-(3H)-pyrimidinone
           deaminase and 5-amino-6-(5'-phosphoribosylamino)uracil
           reductase [Geobacter sulfurreducens KN400]
          Length = 369

 Score = 37.0 bits (84), Expect = 0.86,   Method: Compositional matrix adjust.
 Identities = 27/86 (31%), Positives = 41/86 (47%), Gaps = 15/86 (17%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85
           VG V V    ++    +R    K  T HAE+ A+R      +  +    D+YVTLEPC+ 
Sbjct: 29  VGCVIVREGVVVGEGWHR----KAGTPHAEVHALRE-----AGPLARGADVYVTLEPCSH 79

Query: 86  ------CAAAISLARIRRLYYGASNP 105
                 CA A+  A + R++ G  +P
Sbjct: 80  FGRTPPCADALVAAGVARVFVGMVDP 105


>gi|170017119|ref|YP_001728038.1| riboflavin biosynthesis protein RibD [Leuconostoc citreum KM20]
 gi|169803976|gb|ACA82594.1| Riboflavin biosynthesis protein RibD [Leuconostoc citreum KM20]
          Length = 347

 Score = 37.0 bits (84), Expect = 0.88,   Method: Compositional matrix adjust.
 Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 13/86 (15%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85
           VGA+ V N +I++   + +       AHAEI A      +  Q  + +  +YVTLEPC +
Sbjct: 28  VGAIIVKNGQILATGYHHSFG----AAHAEINAFE---NLRDQTDIVDSTMYVTLEPCFV 80

Query: 86  ------CAAAISLARIRRLYYGASNP 105
                 CA AI+   ++R+  G+ +P
Sbjct: 81  TGKVGACALAIAQWGVKRVVVGSFDP 106


>gi|255038066|ref|YP_003088687.1| riboflavin biosynthesis protein RibD [Dyadobacter fermentans DSM
           18053]
 gi|254950822|gb|ACT95522.1| riboflavin biosynthesis protein RibD [Dyadobacter fermentans DSM
           18053]
          Length = 354

 Score = 37.0 bits (84), Expect = 0.88,   Method: Compositional matrix adjust.
 Identities = 33/113 (29%), Positives = 51/113 (45%), Gaps = 12/113 (10%)

Query: 1   MKKGNVFMSCALEEAQ--NAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           M+  N +M  AL+ A     A+     VG V V + +II    +R         HAE+ A
Sbjct: 1   METDNQWMERALQLAGYGRGAVSPNPMVGCVIVHDGRIIGEGWHRAYG----GPHAEVRA 56

Query: 59  IRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP 105
           I       +  +LP+   YVTLEPC+       CA  +   R++R+    ++P
Sbjct: 57  IEDTDARGNSHLLPQATAYVTLEPCSHTGKTPPCADLLVSRRLKRVVICNNDP 109


>gi|71083736|ref|YP_266456.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Candidatus
           Pelagibacter ubique HTCC1062]
 gi|71062849|gb|AAZ21852.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Candidatus
           Pelagibacter ubique HTCC1062]
          Length = 351

 Score = 37.0 bits (84), Expect = 0.88,   Method: Compositional matrix adjust.
 Identities = 30/87 (34%), Positives = 41/87 (47%), Gaps = 19/87 (21%)

Query: 26  VGAVAVLNNKIIS--RAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83
           VG V V NNKI+S  + G +       T HAE  AI+      S E +    +YVTLEPC
Sbjct: 21  VGCVIVKNNKILSIGQTGFKG------TPHAEFNAIKN-----SHENIEGSKMYVTLEPC 69

Query: 84  TM------CAAAISLARIRRLYYGASN 104
           +       C   I   +I+ + YG  +
Sbjct: 70  SHYGKTPPCTNIIIKNKIKEVVYGVED 96


>gi|300743929|ref|ZP_07072949.1| guanine deaminase [Rothia dentocariosa M567]
 gi|300380290|gb|EFJ76853.1| guanine deaminase [Rothia dentocariosa M567]
          Length = 163

 Score = 37.0 bits (84), Expect = 0.89,   Method: Compositional matrix adjust.
 Identities = 23/64 (35%), Positives = 31/64 (48%), Gaps = 1/64 (1%)

Query: 24 IPVGAVAVLNNKIISRAG-NRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEP 82
          +P   V V +   +S  G NR  E  D +AHAE++A+R     L    L    L  T EP
Sbjct: 27 LPFVGVVVQSGVAVSNFGFNRVYETGDASAHAEVVAMRDAMSRLKCSDLSGTVLLATGEP 86

Query: 83 CTMC 86
          C +C
Sbjct: 87 CGLC 90


>gi|188990100|ref|YP_001902110.1| cytosine deaminase [Xanthomonas campestris pv. campestris str.
           B100]
 gi|167731860|emb|CAP50044.1| cytosine deaminase [Xanthomonas campestris pv. campestris]
          Length = 151

 Score = 37.0 bits (84), Expect = 0.89,   Method: Compositional matrix adjust.
 Identities = 27/106 (25%), Positives = 44/106 (41%), Gaps = 4/106 (3%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNN-KIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
            +  A+ EA+       IP+GA    ++ +++    NR  +  D + H E  A R   R 
Sbjct: 10  LLDTAIAEARQGLAEGGIPIGAALYHSDGRLLGCGHNRRVQENDPSVHGETDAFRKAGR- 68

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIE 111
             Q    +  +  TL PC  C+  +    I  +  G S    GGI+
Sbjct: 69  --QRRYQDTIMVTTLAPCWYCSGLVRQFNIGTVVVGESVTFQGGID 112


>gi|151940847|gb|EDN59229.1| tRNA-specific adenosine deaminase subunit [Saccharomyces cerevisiae
           YJM789]
 gi|190405371|gb|EDV08638.1| tRNA-specific adenosine deaminase 3 [Saccharomyces cerevisiae
           RM11-1a]
 gi|259148298|emb|CAY81545.1| Tad3p [Saccharomyces cerevisiae EC1118]
          Length = 322

 Score = 37.0 bits (84), Expect = 0.89,   Method: Compositional matrix adjust.
 Identities = 13/39 (33%), Positives = 26/39 (66%)

Query: 73  EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIE 111
           + D+Y+T EPC+MC+ A+  +R+RR+ +     + G ++
Sbjct: 244 DYDVYLTHEPCSMCSMALIHSRVRRVVFLTEMQRTGSLK 282


>gi|149197492|ref|ZP_01874543.1| riboflavin biosynthesis protein RibD [Lentisphaera araneosa
           HTCC2155]
 gi|149139510|gb|EDM27912.1| riboflavin biosynthesis protein RibD [Lentisphaera araneosa
           HTCC2155]
          Length = 342

 Score = 37.0 bits (84), Expect = 0.90,   Method: Compositional matrix adjust.
 Identities = 31/92 (33%), Positives = 43/92 (46%), Gaps = 12/92 (13%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85
           VGAV V + ++I+   ++    K  T HAE  AI        ++ L    +YVTLEPC  
Sbjct: 26  VGAVIVKDGEVIADGWHK----KAGTHHAEKDAITNAKEAGREDDLYGSTIYVTLEPCCT 81

Query: 86  ------CAAAISLARIRRLYYGA--SNPKGGG 109
                 C   I  A I ++ YG   SNP+  G
Sbjct: 82  YGRTEPCTEWIMDAGIAKVVYGCTDSNPEHAG 113


>gi|302408545|ref|XP_003002107.1| FCY1p [Verticillium albo-atrum VaMs.102]
 gi|261359028|gb|EEY21456.1| FCY1p [Verticillium albo-atrum VaMs.102]
          Length = 239

 Score = 37.0 bits (84), Expect = 0.91,   Method: Compositional matrix adjust.
 Identities = 27/98 (27%), Positives = 40/98 (40%), Gaps = 20/98 (20%)

Query: 25  PVGAVAVLNNKIISRAG------NRNRELKDVTAHAEILAIRMGCRILSQEILP------ 72
           P G V ++N+ +  R G      N + +  +   H E+ AI     IL+    P      
Sbjct: 70  PFGTV-IVNHTVSGRGGIVCTGENTSHQSGNPIMHGEMAAIANCSHILTDPTGPYNMTVA 128

Query: 73  -------EVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
                  ++ +Y   E C MCA+AI  A  R   YG S
Sbjct: 129 EALAAFSDLTIYTNAESCPMCASAIRWAGFREYVYGTS 166


>gi|329122085|ref|ZP_08250693.1| riboflavin biosynthesis protein RibD [Dialister micraerophilus DSM
           19965]
 gi|327466892|gb|EGF12408.1| riboflavin biosynthesis protein RibD [Dialister micraerophilus DSM
           19965]
          Length = 378

 Score = 37.0 bits (84), Expect = 0.91,   Method: Compositional matrix adjust.
 Identities = 32/107 (29%), Positives = 50/107 (46%), Gaps = 17/107 (15%)

Query: 7   FMSCALEEAQNAALRNEIP--VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           +MS AL+ A++     E    VGAV V N K++      +++  DV  HAE+ A +  C+
Sbjct: 9   WMSHALDLAKHGYWYTETNPLVGAVLVKNGKVVGEG--WHKKYGDV--HAEVNAFK-NCK 63

Query: 65  ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP 105
               E      LYVTLEPC        C   +   +++R+     +P
Sbjct: 64  ----ENTEHATLYVTLEPCCHYGKTPPCLNLVLQKKVKRVVIAMKDP 106


>gi|317154550|ref|YP_004122598.1| CMP/dCMP deaminase zinc-binding protein [Desulfovibrio aespoeensis
           Aspo-2]
 gi|316944801|gb|ADU63852.1| CMP/dCMP deaminase zinc-binding protein [Desulfovibrio aespoeensis
           Aspo-2]
          Length = 176

 Score = 37.0 bits (84), Expect = 0.91,   Method: Compositional matrix adjust.
 Identities = 31/86 (36%), Positives = 40/86 (46%), Gaps = 5/86 (5%)

Query: 22  NEIPVGAV-AVLNNKIISRAGNRNRELKDVTAHAE-ILAIRMGCRILSQE--ILPEVDLY 77
            E P GAV A  +  ++          +D T HAE +LA R  CR    +        LY
Sbjct: 33  GEGPFGAVVAGPDGMVVMTQQAETIATQDHTRHAEAVLASRF-CRAHYDDPAFRAGSTLY 91

Query: 78  VTLEPCTMCAAAISLARIRRLYYGAS 103
            ++EPC MC  A+  A I RL YG S
Sbjct: 92  SSMEPCAMCMFAMFKAGIGRLVYGLS 117


>gi|37651679|ref|NP_932553.1| Cd [Aeromonas phage 44RR2.8t]
 gi|66392000|ref|YP_238925.1| cd dCMP deaminase [Aeromonas phage 31]
 gi|34732979|gb|AAQ81516.1| dCMP deaminase [Aeromonas phage 44RR2.8t]
 gi|62114837|gb|AAX63685.1| cd dCMP deaminase [Aeromonas phage 31]
          Length = 172

 Score = 37.0 bits (84), Expect = 0.92,   Method: Compositional matrix adjust.
 Identities = 17/48 (35%), Positives = 30/48 (62%), Gaps = 2/48 (4%)

Query: 53  HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
           HAE+ AI    +  S + +   ++YVT+ PC  CA AI+ + I++++Y
Sbjct: 85  HAELNAILYAAK--SGQSIDGAEMYVTVSPCRECAKAIAQSGIKKVFY 130


>gi|304373353|ref|YP_003856562.1| deoxycytidylate deaminase [Mycoplasma hyorhinis HUB-1]
 gi|304309544|gb|ADM22024.1| deoxycytidylate deaminase [Mycoplasma hyorhinis HUB-1]
          Length = 162

 Score = 37.0 bits (84), Expect = 0.93,   Method: Compositional matrix adjust.
 Identities = 23/64 (35%), Positives = 33/64 (51%), Gaps = 3/64 (4%)

Query: 38  SRAGNRNRELK-DVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIR 96
           S+  N+  E+K     HAEI AI     IL    + +  LYV+L PC+ CA  I+   I 
Sbjct: 64  SKDSNKASEVKYSYVIHAEINAILNS--ILPLNTVEDAKLYVSLFPCSNCAKVIAQTGIT 121

Query: 97  RLYY 100
            +Y+
Sbjct: 122 TIYF 125


>gi|9755339|ref|NP_013420.2| Tad3p [Saccharomyces cerevisiae S288c]
 gi|23822264|sp|Q9URQ3|TAD3_YEAST RecName: Full=tRNA-specific adenosine deaminase subunit TAD3;
           AltName: Full=tRNA-specific adenosine-34 deaminase
           subunit TAD3
 gi|6434059|emb|CAB60630.1| tRNA-specific adenosine-34 deaminase subunit Tad3p/ADAT3
           [Saccharomyces cerevisiae]
 gi|285813730|tpg|DAA09626.1| TPA: Tad3p [Saccharomyces cerevisiae S288c]
          Length = 322

 Score = 37.0 bits (84), Expect = 0.94,   Method: Compositional matrix adjust.
 Identities = 13/39 (33%), Positives = 26/39 (66%)

Query: 73  EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIE 111
           + D+Y+T EPC+MC+ A+  +R+RR+ +     + G ++
Sbjct: 244 DYDVYLTHEPCSMCSMALIHSRVRRVVFLTEMQRTGSLK 282


>gi|257899304|ref|ZP_05678957.1| riboflavin specific deaminase [Enterococcus faecium Com15]
 gi|257837216|gb|EEV62290.1| riboflavin specific deaminase [Enterococcus faecium Com15]
          Length = 364

 Score = 37.0 bits (84), Expect = 0.95,   Method: Compositional matrix adjust.
 Identities = 46/154 (29%), Positives = 65/154 (42%), Gaps = 26/154 (16%)

Query: 1   MKKGNV-----FMSCALEEAQNA---ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTA 52
           M KG +     FM  A+ EA+        N + VGA  V   K+IS   +    L    +
Sbjct: 1   MLKGGIYMHQSFMLAAIAEAKKGKGNTFTNPL-VGAAIVKEGKLISLGAH----LHYGES 55

Query: 53  HAEILAIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPK 106
           HAE+ AI+  C   S E L    LYVTLEPC        C  AI  + I  +  G  +P 
Sbjct: 56  HAEVNAIQ-NCS--SPEELFNSTLYVTLEPCNHQGKQPPCTQAIVQSGITTVVIGQLDPN 112

Query: 107 GGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140
                 G +F       H  ++  G+ E++ R +
Sbjct: 113 PLVAGKGREFLQ----KHGIKVIVGVEEEKCRAL 142


>gi|21232920|ref|NP_638837.1| cytosine deaminase [Xanthomonas campestris pv. campestris str. ATCC
           33913]
 gi|66767007|ref|YP_241769.1| cytosine deaminase [Xanthomonas campestris pv. campestris str.
           8004]
 gi|21114755|gb|AAM42761.1| cytosine deaminase [Xanthomonas campestris pv. campestris str. ATCC
           33913]
 gi|66572339|gb|AAY47749.1| cytosine deaminase [Xanthomonas campestris pv. campestris str.
           8004]
          Length = 151

 Score = 37.0 bits (84), Expect = 0.95,   Method: Compositional matrix adjust.
 Identities = 27/106 (25%), Positives = 44/106 (41%), Gaps = 4/106 (3%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNN-KIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
            +  A+ EA+       IP+GA    ++ +++    NR  +  D + H E  A R   R 
Sbjct: 10  LLDTAIAEARQGLAEGGIPIGAALYHSDGRLLGCGHNRRVQENDPSVHGETDAFRKAGR- 68

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIE 111
             Q    +  +  TL PC  C+  +    I  +  G S    GGI+
Sbjct: 69  --QRRYQDTIMVTTLAPCWYCSGLVRQFNIGTVVVGESVTFQGGID 112


>gi|242243028|ref|ZP_04797473.1| possible diaminohydroxyphosphoribosylaminopyrimidine deaminase
           [Staphylococcus epidermidis W23144]
 gi|242233486|gb|EES35798.1| possible diaminohydroxyphosphoribosylaminopyrimidine deaminase
           [Staphylococcus epidermidis W23144]
          Length = 343

 Score = 37.0 bits (84), Expect = 0.95,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 39/87 (44%), Gaps = 17/87 (19%)

Query: 25  PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM-GCRILSQEILPEVDLYVTLEPC 83
           PVG+V V N +I+    +    LK    HAE+ AI M G +     I      YV+LEPC
Sbjct: 20  PVGSVVVKNGRIVGLGAH----LKKGDKHAEVQAIEMAGLKAQGATI------YVSLEPC 69

Query: 84  TM------CAAAISLARIRRLYYGASN 104
           T       C   I  A I ++ Y   +
Sbjct: 70  THHGSTPPCVDKIIEAGISKVIYAVKD 96


>gi|218516842|ref|ZP_03513682.1| putative guanine/cytosine deaminase protein [Rhizobium etli 8C-3]
          Length = 195

 Score = 37.0 bits (84), Expect = 0.96,   Method: Compositional matrix adjust.
 Identities = 18/61 (29%), Positives = 30/61 (49%)

Query: 44  NRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
           N EL++   H E+  ++    +  +    ++    T EPCTMC +AI+ A     YY  S
Sbjct: 51  NNELENPLWHGEVHTLKRFYELGDKPATRDLIFLSTHEPCTMCMSAITWAGFDNFYYFFS 110

Query: 104 N 104
           +
Sbjct: 111 H 111


>gi|91202314|emb|CAJ75374.1| strongly similar to riboflavin biosynthesis protein RibD
          [Candidatus Kuenenia stuttgartiensis]
          Length = 367

 Score = 37.0 bits (84), Expect = 0.96,   Method: Compositional matrix adjust.
 Identities = 31/82 (37%), Positives = 42/82 (51%), Gaps = 17/82 (20%)

Query: 7  FMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG-- 62
          +M+ ALE A+    +    P VGAV V NN+I+ +  ++N       AHAEI AI  G  
Sbjct: 11 YMTLALELAEKGRGMVEPNPMVGAVIVKNNEIVGKGYHKNYG----GAHAEIHAINEGGV 66

Query: 63 -CRILSQEILPEVDLYVTLEPC 83
           C+           LYVT+EPC
Sbjct: 67 NCK--------GATLYVTMEPC 80


>gi|224025262|ref|ZP_03643628.1| hypothetical protein BACCOPRO_01999 [Bacteroides coprophilus DSM
           18228]
 gi|224018498|gb|EEF76496.1| hypothetical protein BACCOPRO_01999 [Bacteroides coprophilus DSM
           18228]
          Length = 306

 Score = 37.0 bits (84), Expect = 0.97,   Method: Compositional matrix adjust.
 Identities = 46/162 (28%), Positives = 69/162 (42%), Gaps = 39/162 (24%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKII-----SRAGNRNRELKDVTA 52
           M K   ++   ++ A+N  L N  P   VGAV V  ++II     +R G           
Sbjct: 1   MTKDEKYIRRCIQLARNG-LCNAAPNPMVGAVVVYRDRIIGEGYHARCGE---------G 50

Query: 53  HAEILAIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP- 105
           HAE+ A+R    +  + +L E  LYV+LEPC+       CA  I    I R+  G  +P 
Sbjct: 51  HAEVNALR---SVRDESLLKEATLYVSLEPCSHYGKTPPCADLIVSKGIPRVVVGCMDPF 107

Query: 106 ---KGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
               G GI    +     T         G+ E+  R++I+ F
Sbjct: 108 PLVAGRGIRKLEEAGIDVTV--------GVLEEECRELIRRF 141


>gi|256078948|ref|XP_002575754.1| cytidine deaminase; dCTP deaminase [Schistosoma mansoni]
 gi|238661001|emb|CAZ31988.1| cytidine deaminase [Schistosoma mansoni]
          Length = 655

 Score = 37.0 bits (84), Expect = 0.98,   Method: Composition-based stats.
 Identities = 16/55 (29%), Positives = 26/55 (47%)

Query: 75  DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIY 129
           D Y +LEPC MC  A+   RIRR++        G   N ++ +     +H   ++
Sbjct: 598 DAYFSLEPCLMCGMALLHNRIRRVFCCQKLAGDGAFTNASRLHVQEQLNHRFRVF 652


>gi|258405543|ref|YP_003198285.1| riboflavin biosynthesis protein RibD [Desulfohalobium retbaense DSM
           5692]
 gi|257797770|gb|ACV68707.1| riboflavin biosynthesis protein RibD [Desulfohalobium retbaense DSM
           5692]
          Length = 384

 Score = 37.0 bits (84), Expect = 0.98,   Method: Compositional matrix adjust.
 Identities = 37/102 (36%), Positives = 44/102 (43%), Gaps = 18/102 (17%)

Query: 53  HAEILAIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPK 106
           HAE+ AI    R    + L E  L+VTLEPC        C  AI  A IR +  G  +P 
Sbjct: 44  HAEVEAIAQ-ARAAGVD-LSECTLWVTLEPCNHHGRTPPCTKAIIEAGIRSVGIGTLDPN 101

Query: 107 ---GGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
              GGG   GT F          E+  GI E   R +I DF 
Sbjct: 102 PHVGGG---GTAFLR----DQGVEVEVGILEPACRDLIADFL 136


>gi|72162124|ref|YP_289781.1| hypothetical protein Tfu_1723 [Thermobifida fusca YX]
 gi|71915856|gb|AAZ55758.1| conserved hypothetical protein [Thermobifida fusca YX]
          Length = 163

 Score = 37.0 bits (84), Expect = 0.98,   Method: Compositional matrix adjust.
 Identities = 26/93 (27%), Positives = 39/93 (41%)

Query: 12  LEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEIL 71
           +E A  A    + P G+V V  +  +    +      D T H E    R   R L+    
Sbjct: 14  VELAAQALEAGDEPFGSVLVAGDGTVLAEDHNRVASGDRTRHPEFALARWAVRNLTPNER 73

Query: 72  PEVDLYVTLEPCTMCAAAISLARIRRLYYGASN 104
            E  +Y + E C MCAAA     + R+ Y +S+
Sbjct: 74  AEATVYTSGEHCPMCAAAHGWVGLGRIVYASSS 106


>gi|170088388|ref|XP_001875417.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164650617|gb|EDR14858.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 164

 Score = 37.0 bits (84), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 17/43 (39%), Positives = 26/43 (60%), Gaps = 7/43 (16%)

Query: 70  ILPEVDLYVTLEPCTM-------CAAAISLARIRRLYYGASNP 105
           IL + D+Y TLEPC++       C AA+  A++RR + G + P
Sbjct: 84  ILSQSDVYTTLEPCSIRTSGLAPCVAALIGAKVRRCFIGVAEP 126


>gi|156976611|ref|YP_001447517.1| deoxycytidylate deaminase [Vibrio harveyi ATCC BAA-1116]
 gi|156528205|gb|ABU73290.1| hypothetical protein VIBHAR_05385 [Vibrio harveyi ATCC BAA-1116]
          Length = 168

 Score = 37.0 bits (84), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 32/86 (37%), Positives = 40/86 (46%), Gaps = 18/86 (20%)

Query: 26  VGAVAVLNNKIISRAGN------------RNRELKDV-TAHAEILAIRMGCRILSQEILP 72
           VGAV   NN+I+S   N              RELK + T HAE  AI     + S+  L 
Sbjct: 43  VGAVITKNNRIVSVGFNGYPHGVSDSVDTDERELKYLKTLHAEENAI-----LFSKRDLD 97

Query: 73  EVDLYVTLEPCTMCAAAISLARIRRL 98
             D++VT  PC  CAA I    I R+
Sbjct: 98  GCDIWVTHFPCPNCAAKIIQTGIARV 123


>gi|327189580|gb|EGE56732.1| putative guanine/cytosine deaminase protein [Rhizobium etli
           CNPAF512]
          Length = 195

 Score = 37.0 bits (84), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 18/61 (29%), Positives = 30/61 (49%)

Query: 44  NRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
           N EL++   H E+  ++    +  +    ++    T EPCTMC +AI+ A     YY  S
Sbjct: 51  NNELENPLWHGEVHTLKRFYELGDKPATRDLIFLSTHEPCTMCMSAITWAGFDNFYYFFS 110

Query: 104 N 104
           +
Sbjct: 111 H 111


>gi|212528944|ref|XP_002144629.1| conserved hypothetical protein [Penicillium marneffei ATCC 18224]
 gi|210074027|gb|EEA28114.1| conserved hypothetical protein [Penicillium marneffei ATCC 18224]
          Length = 162

 Score = 37.0 bits (84), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 28/91 (30%), Positives = 41/91 (45%), Gaps = 1/91 (1%)

Query: 15  AQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPE 73
           A+ A    + P G+V V    +II    NR     DVT H E        + L+Q     
Sbjct: 17  AREALEAGDAPFGSVLVNAAGEIIKEDRNRVVTQADVTWHPEFTLAGWAQKNLTQTERAA 76

Query: 74  VDLYVTLEPCTMCAAAISLARIRRLYYGASN 104
             +Y + E C MCA A + A + R+ Y +S+
Sbjct: 77  ATVYTSGEHCPMCATAHAYAGLGRIVYASSS 107


>gi|29349136|ref|NP_812639.1| riboflavin biosynthesis protein ribD [Bacteroides thetaiotaomicron
           VPI-5482]
 gi|29341044|gb|AAO78833.1| riboflavin biosynthesis protein ribD [Bacteroides thetaiotaomicron
           VPI-5482]
          Length = 339

 Score = 37.0 bits (84), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 37/125 (29%), Positives = 56/125 (44%), Gaps = 17/125 (13%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85
           VGAV V +  II    +    ++   AHAE+ AIR    +  + +L    +YV+LEPC+ 
Sbjct: 21  VGAVIVCDGLIIGEGYH----IRCGEAHAEVNAIR---SVKDKSLLSRSTIYVSLEPCSH 73

Query: 86  ------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139
                 CA  I   +I R+  G  +P       G Q    A      E+  G+ E+  R 
Sbjct: 74  YGKTPPCADLIIEKQIPRIVIGCQDPFSQVAGRGIQKLRDA----GREVTVGVLEKECRY 129

Query: 140 IIQDF 144
           +I+ F
Sbjct: 130 LIRRF 134


>gi|1078080|pir||S53395 hypothetical protein YLR316c - yeast (Saccharomyces cerevisiae)
          Length = 299

 Score = 37.0 bits (84), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 13/39 (33%), Positives = 26/39 (66%)

Query: 73  EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIE 111
           + D+Y+T EPC+MC+ A+  +R+RR+ +     + G ++
Sbjct: 221 DYDVYLTHEPCSMCSMALIHSRVRRVVFLTEMQRTGSLK 259


>gi|302691412|ref|XP_003035385.1| hypothetical protein SCHCODRAFT_51868 [Schizophyllum commune H4-8]
 gi|300109081|gb|EFJ00483.1| hypothetical protein SCHCODRAFT_51868 [Schizophyllum commune H4-8]
          Length = 163

 Score = 36.6 bits (83), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 7/46 (15%)

Query: 68  QEILPEVDLYVTLEPCTM-------CAAAISLARIRRLYYGASNPK 106
            +IL +VD+Y TLEPC++       CA A+  A +RR + G   P 
Sbjct: 82  DDILRQVDVYTTLEPCSIRTSGLAPCADALIAAGVRRCFIGVGEPD 127


>gi|190891665|ref|YP_001978207.1| guanine/cytosine deaminase [Rhizobium etli CIAT 652]
 gi|190696944|gb|ACE91029.1| putative guanine/cytosine deaminase protein [Rhizobium etli CIAT
           652]
          Length = 195

 Score = 36.6 bits (83), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 18/61 (29%), Positives = 30/61 (49%)

Query: 44  NRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
           N EL++   H E+  ++    +  +    ++    T EPCTMC +AI+ A     YY  S
Sbjct: 51  NNELENPLWHGEVHTLKRFYELGDKPATRDLIFLSTHEPCTMCMSAITWAGFDNFYYFFS 110

Query: 104 N 104
           +
Sbjct: 111 H 111


>gi|194333661|ref|YP_002015521.1| riboflavin biosynthesis protein RibD [Prosthecochloris aestuarii
           DSM 271]
 gi|194311479|gb|ACF45874.1| riboflavin biosynthesis protein RibD [Prosthecochloris aestuarii
           DSM 271]
          Length = 373

 Score = 36.6 bits (83), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 41/152 (26%), Positives = 66/152 (43%), Gaps = 27/152 (17%)

Query: 7   FMSCALEEA-QNAALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           +M   LE A + A L +  P VG+V V+ ++++    +          HAE+ A+     
Sbjct: 14  YMHRCLELARKGAGLVSPNPMVGSVIVVEDRVVGEGFHERYG----GPHAEVNAL---AS 66

Query: 65  ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPK----GGGIENGT 114
           +    +LP   LYV LEPC+       C+  I   +IRR+  G  +P     G GIE   
Sbjct: 67  VSDASLLPSSTLYVNLEPCSHYGKTPPCSDLIISKKIRRVVVGCLDPHEKVAGKGIEKLR 126

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
           Q           E+  G+ ++ S  + + F K
Sbjct: 127 QAGV--------EVTIGVLQRESEALNEAFIK 150


>gi|153832876|ref|ZP_01985543.1| deoxycytidylate deaminase [Vibrio harveyi HY01]
 gi|148870799|gb|EDL69698.1| deoxycytidylate deaminase [Vibrio harveyi HY01]
          Length = 152

 Score = 36.6 bits (83), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 32/86 (37%), Positives = 40/86 (46%), Gaps = 18/86 (20%)

Query: 26  VGAVAVLNNKIISRAGN------------RNRELKDV-TAHAEILAIRMGCRILSQEILP 72
           VGAV   NN+I+S   N              RELK + T HAE  AI     + S+  L 
Sbjct: 27  VGAVITKNNRIVSVGFNGYPHGVSDSVDTDERELKYLKTLHAEENAI-----LFSKRDLD 81

Query: 73  EVDLYVTLEPCTMCAAAISLARIRRL 98
             D++VT  PC  CAA I    I R+
Sbjct: 82  GCDIWVTHFPCPNCAAKIIQTGIARV 107


>gi|115399304|ref|XP_001215241.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
 gi|114192124|gb|EAU33824.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
          Length = 165

 Score = 36.6 bits (83), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 28/94 (29%), Positives = 42/94 (44%), Gaps = 1/94 (1%)

Query: 12  LEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEI 70
           +E A+ A    + P G+V V     I+    NR     DVT H E+       + LSQ  
Sbjct: 14  VELAREALQAGDAPFGSVLVDAAGNILKEDRNRTVTDADVTLHPELTLALWAQKNLSQNE 73

Query: 71  LPEVDLYVTLEPCTMCAAAISLARIRRLYYGASN 104
                +Y + E C MCAA  +   + R+ Y +S+
Sbjct: 74  RATATVYTSGEHCPMCAAVHANVGLGRIVYASSS 107


>gi|269960107|ref|ZP_06174484.1| deoxycytidylate deaminase, putative [Vibrio harveyi 1DA3]
 gi|269835406|gb|EEZ89488.1| deoxycytidylate deaminase, putative [Vibrio harveyi 1DA3]
          Length = 152

 Score = 36.6 bits (83), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 32/86 (37%), Positives = 40/86 (46%), Gaps = 18/86 (20%)

Query: 26  VGAVAVLNNKIISRAGN------------RNRELKDV-TAHAEILAIRMGCRILSQEILP 72
           VGAV   NN+I+S   N              RELK + T HAE  AI     + S+  L 
Sbjct: 27  VGAVITKNNRIVSVGFNGYPHGVSDSVDTDERELKYLKTLHAEENAI-----LFSKRDLD 81

Query: 73  EVDLYVTLEPCTMCAAAISLARIRRL 98
             D++VT  PC  CAA I    I R+
Sbjct: 82  GCDIWVTHFPCPNCAAKIIQTGIARV 107


>gi|149247534|ref|XP_001528176.1| hypothetical protein LELG_00696 [Lodderomyces elongisporus NRRL
           YB-4239]
 gi|146448130|gb|EDK42518.1| hypothetical protein LELG_00696 [Lodderomyces elongisporus NRRL
           YB-4239]
          Length = 360

 Score = 36.6 bits (83), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 16/38 (42%), Positives = 22/38 (57%)

Query: 76  LYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENG 113
           +Y T EPC MC+ A+  +RI R  Y      GGG+E+ 
Sbjct: 284 VYTTHEPCVMCSMALVHSRIVRCTYLKPVANGGGMESS 321


>gi|148544108|ref|YP_001271478.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Lactobacillus reuteri DSM 20016]
 gi|184153479|ref|YP_001841820.1| riboflavin biosynthesis protein [Lactobacillus reuteri JCM 1112]
 gi|148531142|gb|ABQ83141.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Lactobacillus reuteri DSM 20016]
 gi|183224823|dbj|BAG25340.1| riboflavin biosynthesis protein [Lactobacillus reuteri JCM 1112]
          Length = 352

 Score = 36.6 bits (83), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 38/109 (34%), Positives = 50/109 (45%), Gaps = 20/109 (18%)

Query: 7   FMSCALEEAQNAALRNEIP----VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
           FM  A+ EA  A   NE      VGAV V N ++++R      E   +  HAE  AI   
Sbjct: 6   FMQMAIAEAAKAG--NETWKNPRVGAVVVKNGQVLARG--HTHEYGGI--HAERDAIGK- 58

Query: 63  CRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP 105
              L+ +      LYVTLEPC        C+ AI  A IRR+    ++P
Sbjct: 59  ---LTPKQGQGATLYVTLEPCNHYGKQPPCSQAIIDAGIRRVVIAETDP 104


>gi|294054578|ref|YP_003548236.1| riboflavin biosynthesis protein RibD [Coraliomargarita akajimensis
           DSM 45221]
 gi|293613911|gb|ADE54066.1| riboflavin biosynthesis protein RibD [Coraliomargarita akajimensis
           DSM 45221]
          Length = 369

 Score = 36.6 bits (83), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 36/116 (31%), Positives = 50/116 (43%), Gaps = 18/116 (15%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85
           VGAV V +  I++   +          HAEI A+    R  + + +    LYVTLEPC+ 
Sbjct: 32  VGAVIVEDGAIVAEGWHTAAG----QPHAEIEALAALGRAPASDAV----LYVTLEPCST 83

Query: 86  ------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQ 135
                 C  AI  A I+ +  GA++P      NG      A  H    +  GI EQ
Sbjct: 84  SGRTGACTDAILRAGIQNVVIGATDPNPDHAGNGLDLLREAGVH----VQAGILEQ 135


>gi|257453179|ref|ZP_05618478.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Fusobacterium
           sp. 3_1_5R]
 gi|317059713|ref|ZP_07924198.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase
           [Fusobacterium sp. 3_1_5R]
 gi|313685389|gb|EFS22224.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase
           [Fusobacterium sp. 3_1_5R]
          Length = 359

 Score = 36.6 bits (83), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 35/107 (32%), Positives = 49/107 (45%), Gaps = 17/107 (15%)

Query: 7   FMSCALEEAQNAALR-NEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           +M  ALE A++   R N  P VGAV V N KII +  +          HAE+ A++    
Sbjct: 6   YMHLALELAKHGEGRVNPNPLVGAVVVKNGKIIGKGYHHEYG----GPHAEVFALQE--- 58

Query: 65  ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP 105
             + E      +YVTLEPC+       CA  I  + I+R      +P
Sbjct: 59  --AGEEAKGATIYVTLEPCSHYGKTPPCAKKIIDSGIKRCVISMGDP 103


>gi|86357578|ref|YP_469470.1| deoxycytidylate deaminase family protein [Rhizobium etli CFN 42]
 gi|86281680|gb|ABC90743.1| probable deoxycytidylate deaminase family protein [Rhizobium etli
           CFN 42]
          Length = 195

 Score = 36.6 bits (83), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 18/61 (29%), Positives = 29/61 (47%)

Query: 44  NRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
           N EL +   H E+  ++    +  +    ++    T EPCTMC +AI+ A     YY  S
Sbjct: 51  NNELDNPLWHGEVHTLKRFYELGDKPQTKDLIFLSTHEPCTMCMSAITWAGFDNFYYFFS 110

Query: 104 N 104
           +
Sbjct: 111 H 111


>gi|71027665|ref|XP_763476.1| hypothetical protein [Theileria parva strain Muguga]
 gi|68350429|gb|EAN31193.1| hypothetical protein, conserved [Theileria parva]
          Length = 312

 Score = 36.6 bits (83), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 31/119 (26%), Positives = 58/119 (48%), Gaps = 16/119 (13%)

Query: 29  VAVLNNKIISRAGNRNRELKDVTAHAEILAI----RMGCRILSQEI--LPEV-----DLY 77
           +    +K+IS A +  R++ ++  HA ILA+        +  +Q+I   P+      ++Y
Sbjct: 181 IITFKDKVISTAFDE-RDV-NILKHASILAVNKIAEAKKKRETQKIKDYPDYLCTGCEVY 238

Query: 78  VTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH---SPEIYPGIS 133
           ++ EPC MC  A+  +RI ++ YG  N K G   +    + +   +H   +  + P IS
Sbjct: 239 LSHEPCCMCGMALLHSRISKVIYGIKNHKLGCFGSVWNLHNMIELNHRFRAFTVTPNIS 297


>gi|227364534|ref|ZP_03848595.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Lactobacillus reuteri MM2-3]
 gi|325682351|ref|ZP_08161868.1| riboflavin specific deaminase [Lactobacillus reuteri MM4-1A]
 gi|227070371|gb|EEI08733.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Lactobacillus reuteri MM2-3]
 gi|324978190|gb|EGC15140.1| riboflavin specific deaminase [Lactobacillus reuteri MM4-1A]
          Length = 355

 Score = 36.6 bits (83), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 38/109 (34%), Positives = 50/109 (45%), Gaps = 20/109 (18%)

Query: 7   FMSCALEEAQNAALRNEIP----VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
           FM  A+ EA  A   NE      VGAV V N ++++R      E   +  HAE  AI   
Sbjct: 9   FMQMAIAEAAKAG--NETWKNPRVGAVVVKNGQVLARG--HTHEYGGI--HAERDAIGK- 61

Query: 63  CRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP 105
              L+ +      LYVTLEPC        C+ AI  A IRR+    ++P
Sbjct: 62  ---LTPKQGQGATLYVTLEPCNHYGKQPPCSQAIIDAGIRRVVIAETDP 107


>gi|170076474|ref|YP_001733112.1| hypothetical protein SYNPCC7002_G0004 [Synechococcus sp. PCC 7002]
 gi|169887336|gb|ACB01044.1| Conserved hypothetical protein, with zinc-binding domain
           [Synechococcus sp. PCC 7002]
          Length = 191

 Score = 36.6 bits (83), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 5/55 (9%)

Query: 53  HAEILAIRMGCRILSQEIL-----PEVDLYVTLEPCTMCAAAISLARIRRLYYGA 102
           HAE++AI +     +Q+ L     P ++L  + EPC MC   I  + ++R+  GA
Sbjct: 81  HAEMVAIAIAQHKFNQDNLSTANLPALELIASTEPCGMCLGGIHWSNLKRVVSGA 135


>gi|281210887|gb|EFA85053.1| hypothetical protein PPL_02049 [Polysphondylium pallidum PN500]
          Length = 234

 Score = 36.6 bits (83), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 25/86 (29%), Positives = 34/86 (39%), Gaps = 2/86 (2%)

Query: 18  AALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLY 77
           A  +  I    +   N  +     N+N   K    H EI+AI     I ++       LY
Sbjct: 57  AVAKKSIFTTVIVAPNGTVACTGLNQNE--KSAIYHGEIVAILNCSAIYNKNTWEGYSLY 114

Query: 78  VTLEPCTMCAAAISLARIRRLYYGAS 103
            T E C MC AA   A   ++ YG S
Sbjct: 115 TTGESCAMCQAAAMWAGFDQIIYGTS 140


>gi|320546418|ref|ZP_08040733.1| riboflavin biosynthesis protein RibD [Streptococcus equinus ATCC
           9812]
 gi|320448803|gb|EFW89531.1| riboflavin biosynthesis protein RibD [Streptococcus equinus ATCC
           9812]
          Length = 351

 Score = 36.6 bits (83), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 37/108 (34%), Positives = 53/108 (49%), Gaps = 17/108 (15%)

Query: 7   FMSCALEEAQNA---ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
           +M  A+EEA+        N + VGAV V +N +I+R  +    L+    HAE  AI + C
Sbjct: 5   YMLQAIEEAKRGFRQTYTNPL-VGAVIVKDNHVIARGAH----LQYGHEHAEKNAI-LHC 58

Query: 64  RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP 105
           +  + E L    LYVTLEPC        C  AI    I+++  G  +P
Sbjct: 59  Q--TPEELFNSTLYVTLEPCHHGGKQPPCTQAIVEVGIKKVVAGQFDP 104


>gi|148262423|ref|YP_001229129.1| CMP/dCMP deaminase, zinc-binding [Geobacter uraniireducens Rf4]
 gi|146395923|gb|ABQ24556.1| CMP/dCMP deaminase, zinc-binding protein [Geobacter uraniireducens
           Rf4]
          Length = 196

 Score = 36.6 bits (83), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 15/30 (50%), Positives = 19/30 (63%)

Query: 75  DLYVTLEPCTMCAAAISLARIRRLYYGASN 104
           DL+ T EPC MC  AI  + +RRL  GA +
Sbjct: 106 DLFATTEPCAMCFGAIPWSGVRRLVCGARD 135


>gi|305667257|ref|YP_003863544.1| putative riboflavin biosynthesis protein [Maribacter sp. HTCC2170]
 gi|88709304|gb|EAR01537.1| putative riboflavin biosynthesis protein [Maribacter sp. HTCC2170]
          Length = 350

 Score = 36.6 bits (83), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 39/111 (35%), Positives = 49/111 (44%), Gaps = 17/111 (15%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57
           M   +++M  AL  A+N  L    P   VGAV V N KII+             AHAE+ 
Sbjct: 1   MSLDHLYMQRALLLAKNG-LGTTAPNPMVGAVLVCNEKIIAEGYTSPYG----GAHAEVN 55

Query: 58  AIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGA 102
           AI     +  + IL    LYVTLEPC+       CA  I    I R+  G 
Sbjct: 56  AIN---SVEDKSILANSTLYVTLEPCSHHGKTPPCADLIIKHNIPRVVIGT 103


>gi|325299195|ref|YP_004259112.1| riboflavin biosynthesis protein RibD [Bacteroides salanitronis DSM
           18170]
 gi|324318748|gb|ADY36639.1| riboflavin biosynthesis protein RibD [Bacteroides salanitronis DSM
           18170]
          Length = 356

 Score = 36.6 bits (83), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 43/153 (28%), Positives = 68/153 (44%), Gaps = 21/153 (13%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57
           M +   ++S  ++ A+N  L N  P   VGAV V  ++II         ++    HAE+ 
Sbjct: 1   MTQDEKYISRCIQLAKNG-LCNTPPNPMVGAVIVYQDRIIGEG----YHIRCGEGHAEVN 55

Query: 58  AIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIE 111
           AI     +  + +L +  LYV+LEPC+       CA  I    I R+  G ++P      
Sbjct: 56  AI---ASVKDESLLRQSTLYVSLEPCSHYGKTPPCADLIIRKGIPRVVVGCTDPFPLVSG 112

Query: 112 NGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
            G Q    A      E+  G+ EQ  + +I+ F
Sbjct: 113 RGIQKLRDAGV----EVKVGVLEQECKDLIRRF 141


>gi|157691490|ref|YP_001485952.1| bifunctional 5-amino-6-(5-phosphoribosylamino)uracil
           reductase/diaminohydroxyphosphoribosylaminopyrimidine
           deaminase [Bacillus pumilus SAFR-032]
 gi|157680248|gb|ABV61392.1| bifunctional 5-amino-6-(5-phosphoribosylamino)uracil
           reductase/diaminohydroxyphosphoribosylaminopyrimidine
           deaminase [Bacillus pumilus SAFR-032]
          Length = 361

 Score = 36.6 bits (83), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 33/115 (28%), Positives = 53/115 (46%), Gaps = 21/115 (18%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP----VGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56
           MK    +M  A+  A+  A++ +      VGAV V   +I+    +    +K    HAEI
Sbjct: 1   MKDDVFYMELAIANAK--AMKGQTSPNPLVGAVIVQQGEIVGMGAH----MKAGEPHAEI 54

Query: 57  LAIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP 105
            A++M     ++E      LYVTLEPC+       C  AI  + ++R+     +P
Sbjct: 55  HALQM-----AREKAKGAHLYVTLEPCSHYGKTGPCTEAIIKSGVKRVVIATQDP 104


>gi|294141969|ref|YP_003557947.1| riboflavin biosynthesis protein RibD [Shewanella violacea DSS12]
 gi|293328438|dbj|BAJ03169.1| riboflavin biosynthesis protein RibD [Shewanella violacea DSS12]
          Length = 379

 Score = 36.6 bits (83), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 32/107 (29%), Positives = 49/107 (45%), Gaps = 12/107 (11%)

Query: 7   FMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           FMS A++ A+      R    VG V  L+++I+    +    ++    HAE+ A+ M  +
Sbjct: 9   FMSRAIKLARRGLYTTRPNPCVGCVITLDDQILGEGFH----IQAGGPHAEVHALAMATK 64

Query: 65  ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP 105
             SQ  L     YVTLEPC+       CA A+    I R+     +P
Sbjct: 65  RASQAALKGATAYVTLEPCSHYGRTPPCAEALIKHGISRVVVAVEDP 111


>gi|332672108|ref|YP_004455116.1| CMP/dCMP deaminase zinc-binding protein [Cellulomonas fimi ATCC
           484]
 gi|332341146|gb|AEE47729.1| CMP/dCMP deaminase zinc-binding protein [Cellulomonas fimi ATCC
           484]
          Length = 161

 Score = 36.6 bits (83), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 32/94 (34%), Positives = 44/94 (46%), Gaps = 2/94 (2%)

Query: 12  LEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNR-ELKDVTAHAEILAIRMGCRILSQEI 70
           LE A+ A    + P G+V V     +  A +RNR +  D T H E+   R     L  E 
Sbjct: 15  LELAREALDDGDEPFGSVLVDAGGTVLLA-DRNRVKDGDGTRHPELEIARWAAAHLPVEE 73

Query: 71  LPEVDLYVTLEPCTMCAAAISLARIRRLYYGASN 104
                +Y + E C MCAAA   A + R+ Y AS+
Sbjct: 74  RAGCTVYTSGEHCPMCAAAHGWAGLGRIVYVASS 107


>gi|315646375|ref|ZP_07899493.1| riboflavin biosynthesis protein RibD [Paenibacillus vortex V453]
 gi|315278018|gb|EFU41338.1| riboflavin biosynthesis protein RibD [Paenibacillus vortex V453]
          Length = 366

 Score = 36.6 bits (83), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 39/148 (26%), Positives = 64/148 (43%), Gaps = 21/148 (14%)

Query: 7   FMSCALEEAQNAALRNEI-PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM-GCR 64
           +MS AL+ A+ A  +  I PV    ++ N  ++  G     L+  T HAEI A+ M G +
Sbjct: 9   YMSLALDLAERAQGQTGINPVVGCVIVKNGALAGVGTH---LERGTPHAEIHALNMAGTK 65

Query: 65  ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
                +      YVTLEPC+       C+  +    ++R+     +P       G Q   
Sbjct: 66  AAGSTV------YVTLEPCSHYGATPPCSERLIAEGVKRVVVACEDPNPLVAGKGIQMLR 119

Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFK 146
            A      E+  GI  +R+ ++ + F K
Sbjct: 120 AAGI----EVVTGILRERALRLNEAFIK 143


>gi|281212623|gb|EFA86783.1| hypothetical protein PPL_00588 [Polysphondylium pallidum PN500]
          Length = 217

 Score = 36.6 bits (83), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 23/83 (27%), Positives = 34/83 (40%), Gaps = 2/83 (2%)

Query: 21  RNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80
           +N +    +   N  +     N+N        H E++AI    RI ++       LY T 
Sbjct: 60  KNNLFTTVIVAPNGTVACTGLNQNE--NSAIYHGEMVAIMNCSRIHNKNTWEGYSLYTTG 117

Query: 81  EPCTMCAAAISLARIRRLYYGAS 103
           E C MC AA   A   ++ YG S
Sbjct: 118 ESCVMCHAAAMWAGFSKVIYGTS 140


>gi|312139813|ref|YP_004007149.1| cytidine/deoxycytidylate deaminase [Rhodococcus equi 103S]
 gi|311889152|emb|CBH48465.1| putative cytidine/deoxycytidylate deaminase [Rhodococcus equi 103S]
          Length = 166

 Score = 36.6 bits (83), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 42/94 (44%), Gaps = 2/94 (2%)

Query: 12  LEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELK-DVTAHAEILAIRMGCRILSQEI 70
           +E A  A L  + P G+V    +   + A +RNR    D T H E    R     LS E 
Sbjct: 22  VELAAEALLAGDEPFGSVLATADGT-AVAEDRNRIADGDSTRHPEFELARWAAENLSAEE 80

Query: 71  LPEVDLYVTLEPCTMCAAAISLARIRRLYYGASN 104
                +Y + E C MCAAA +   + R+ Y AS 
Sbjct: 81  RAGATVYTSGEHCPMCAAAHAWVGLGRIVYVAST 114


>gi|306820099|ref|ZP_07453747.1| riboflavin biosynthesis protein RibD [Eubacterium yurii subsp.
           margaretiae ATCC 43715]
 gi|304551877|gb|EFM39820.1| riboflavin biosynthesis protein RibD [Eubacterium yurii subsp.
           margaretiae ATCC 43715]
          Length = 365

 Score = 36.6 bits (83), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 35/108 (32%), Positives = 52/108 (48%), Gaps = 19/108 (17%)

Query: 7   FMSCALEEAQNAALR---NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
           +M  A++ A+N   R   N I VGAV V +N+II R  +     K   AHAE+ A+   C
Sbjct: 9   YMKLAIDLAKNGIGRTSPNPI-VGAVIVKDNQIIGRGWHE----KYGEAHAEVNALD-NC 62

Query: 64  RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP 105
           ++          +YVTLEPC        C + I  + I  +  G+ +P
Sbjct: 63  QVSPNG----ATMYVTLEPCCHFGKQPPCTSKIIESGISHVVIGSFDP 106


>gi|330858731|ref|YP_004415106.1| putative deoxycytidylate deaminase [Shigella phage Shfl2]
 gi|327397665|gb|AEA73167.1| putative deoxycytidylate deaminase [Shigella phage Shfl2]
          Length = 193

 Score = 36.6 bits (83), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 20/48 (41%), Positives = 27/48 (56%), Gaps = 2/48 (4%)

Query: 53  HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
           HAE+ AI    R  S   +    +YVTL PC  CA AI+ + I++L Y
Sbjct: 104 HAELNAILFAARNGSS--IEGATMYVTLSPCPDCAKAIAQSGIKKLVY 149


>gi|309791156|ref|ZP_07685688.1| hypothetical protein OSCT_1639 [Oscillochloris trichoides DG6]
 gi|308226718|gb|EFO80414.1| hypothetical protein OSCT_1639 [Oscillochloris trichoides DG6]
          Length = 196

 Score = 36.6 bits (83), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 5/61 (8%)

Query: 51  TAHAEILAI-----RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNP 105
           +AHAEI+A+     R+G   L    LP   + +   PC MC  A+  + +R +    + P
Sbjct: 80  SAHAEIMALSLAQHRLGTYDLGAAGLPTHQIVINWRPCAMCFGALLWSGVRSVVIAGAGP 139

Query: 106 K 106
           +
Sbjct: 140 E 140


>gi|331270609|ref|YP_004397101.1| riboflavin biosynthesis protein RibD [Clostridium botulinum
           BKT015925]
 gi|329127159|gb|AEB77104.1| riboflavin biosynthesis protein RibD [Clostridium botulinum
           BKT015925]
          Length = 372

 Score = 36.6 bits (83), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 35/127 (27%), Positives = 59/127 (46%), Gaps = 19/127 (14%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85
           VGAV V +NKII    ++         HAEI A++       +E +    +YVTLEPC+ 
Sbjct: 26  VGAVIVKDNKIIGEGYHQYFG----ENHAEINALKN-----VKEDVNGATMYVTLEPCSH 76

Query: 86  ------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139
                 CA AI  + I+++  G  +P       G +       ++  E+  G+ E+  ++
Sbjct: 77  YGKTPPCANAIVKSGIKKVIIGMRDPNSLVAGRGIRILK----NNGIEVIQGVLEEEIKK 132

Query: 140 IIQDFFK 146
           + + F K
Sbjct: 133 VNEIFIK 139


>gi|256839100|ref|ZP_05544610.1| riboflavin biosynthesis protein RibD [Parabacteroides sp. D13]
 gi|256740019|gb|EEU53343.1| riboflavin biosynthesis protein RibD [Parabacteroides sp. D13]
          Length = 359

 Score = 36.6 bits (83), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 36/126 (28%), Positives = 55/126 (43%), Gaps = 17/126 (13%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85
           VGAV V   +II    +R    K   AHAE+ AI     +  + +L +  +YV+LEPC+ 
Sbjct: 29  VGAVVVHKGRIIGEGFHR----KCGEAHAEVNAI---ASVKDESLLKDSTIYVSLEPCSH 81

Query: 86  ------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139
                 CA  I    I R+  G  +P       G +    A      E+  G+ E+ +R 
Sbjct: 82  YGKTPPCAELIIRKGIPRVVVGCLDPFPEVSGRGVRMLREAGV----EVVTGVMEEEARA 137

Query: 140 IIQDFF 145
           + + F 
Sbjct: 138 LNKAFM 143


>gi|331005895|ref|ZP_08329246.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase [gamma
           proteobacterium IMCC1989]
 gi|330420291|gb|EGG94606.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase [gamma
           proteobacterium IMCC1989]
          Length = 397

 Score = 36.6 bits (83), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 50/158 (31%), Positives = 70/158 (44%), Gaps = 36/158 (22%)

Query: 7   FMSCALEEAQNA--ALRNEIPVGAVAVLNNKIIS-----RAGNRNRELKDVTAHAEILAI 59
           FMS A++ A+      R    VG V V N ++IS     RAG          AHAEI A+
Sbjct: 10  FMSLAIQLAEKGRYTTRPNPCVGCVLVKNGQVISEGWHYRAGE---------AHAEIHAL 60

Query: 60  RMGCRILSQEILPE-VDLYVTLEPCT------MCAAAI---SLARIRRLYYGASNPKGGG 109
           +     L  E+  E +  YVTLEPC+       CA A+   +   I R+ YG  +P    
Sbjct: 61  QQ----LPIEVKAENITAYVTLEPCSHQGRTGSCAMALADRTNTGIIRVVYGMEDPNPLV 116

Query: 110 IENGTQFYTLATCHHSPEIYPG-ISEQRSRQIIQDFFK 146
              G     LA    S  +  G + EQ++  + Q FF+
Sbjct: 117 AGKG-----LAILRESGCVVEGPLMEQQAAALNQGFFR 149


>gi|301308353|ref|ZP_07214307.1| riboflavin biosynthesis protein RibD [Bacteroides sp. 20_3]
 gi|300833823|gb|EFK64439.1| riboflavin biosynthesis protein RibD [Bacteroides sp. 20_3]
          Length = 359

 Score = 36.6 bits (83), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 36/126 (28%), Positives = 55/126 (43%), Gaps = 17/126 (13%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85
           VGAV V   +II    +R    K   AHAE+ AI     +  + +L +  +YV+LEPC+ 
Sbjct: 29  VGAVVVHKGRIIGEGFHR----KCGEAHAEVNAI---ASVKDESLLKDSTIYVSLEPCSH 81

Query: 86  ------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139
                 CA  I    I R+  G  +P       G +    A      E+  G+ E+ +R 
Sbjct: 82  YGKTPPCAELIIRKGIPRVVVGCLDPFPEVSGRGVRMLREAGV----EVVTGVMEEEARA 137

Query: 140 IIQDFF 145
           + + F 
Sbjct: 138 LNKAFM 143


>gi|9632715|ref|NP_049828.1| Cd dCMP deaminase [Enterobacteria phage T4]
 gi|118398|sp|P16006|DCTD_BPT4 RecName: Full=Deoxycytidylate deaminase; AltName: Full=dCMP
           deaminase; Short=dCD
 gi|5354339|gb|AAD42546.1|AF158101_133 Cd dCMP deaminase [Enterobacteria phage T4]
 gi|215838|gb|AAA32489.1| deoxycytidylate deaminase (EC 3.5.4.12) [Enterobacteria phage T4]
 gi|299780576|gb|ADJ39938.1| deoxycytidylate deaminase [Enterobacteria phage T4T]
          Length = 193

 Score = 36.6 bits (83), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 20/48 (41%), Positives = 27/48 (56%), Gaps = 2/48 (4%)

Query: 53  HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
           HAE+ AI    R  S   +    +YVTL PC  CA AI+ + I++L Y
Sbjct: 104 HAELNAILFAARNGSS--IEGATMYVTLSPCPDCAKAIAQSGIKKLVY 149


>gi|303238038|ref|ZP_07324581.1| riboflavin biosynthesis protein RibD [Prevotella disiens
           FB035-09AN]
 gi|302481828|gb|EFL44880.1| riboflavin biosynthesis protein RibD [Prevotella disiens
           FB035-09AN]
          Length = 335

 Score = 36.6 bits (83), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 39/122 (31%), Positives = 57/122 (46%), Gaps = 18/122 (14%)

Query: 3   KGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
           +  ++M   L+ A+N  L N  P   VGAV V ++  I   G   R  +    HAE+ A 
Sbjct: 8   RDEMYMCRCLQLAKNGRL-NAKPNPMVGAVIVSHDGKIIGEGYHVRCGE---GHAEVNAF 63

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP----KGGG 109
               R   + +L E  +YV+LEPC+       CA  I    +RR+  G  +P    +G G
Sbjct: 64  H-SVRPTDEHLLSESTIYVSLEPCSHYGKTPPCADLIVRKGVRRMVCGCVDPFSEVQGRG 122

Query: 110 IE 111
           IE
Sbjct: 123 IE 124


>gi|189462016|ref|ZP_03010801.1| hypothetical protein BACCOP_02688 [Bacteroides coprocola DSM 17136]
 gi|189431230|gb|EDV00215.1| hypothetical protein BACCOP_02688 [Bacteroides coprocola DSM 17136]
          Length = 344

 Score = 36.6 bits (83), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 37/125 (29%), Positives = 55/125 (44%), Gaps = 17/125 (13%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85
           VGAV V N++II         ++    HAE+ AIR    +  + +L +  +YV+LEPC+ 
Sbjct: 28  VGAVIVCNDRIIGEG----YHVRCGEGHAEVNAIR---SVKDESLLKKSTIYVSLEPCSH 80

Query: 86  ------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139
                 CA  I    I R+  G  +P       G Q    A      E+  G+ E   R 
Sbjct: 81  YGKTPPCADLIISKGIPRVVVGCVDPFSLVSGRGIQKLRDAGI----EVTVGVLENECRA 136

Query: 140 IIQDF 144
           +I+ F
Sbjct: 137 LIKRF 141


>gi|116326433|ref|YP_803153.1| dCMP deaminase [Enterobacteria phage RB32]
 gi|228861145|ref|YP_002854168.1| dCMP deaminase [Enterobacteria phage RB51]
 gi|228861526|ref|YP_002854547.1| dCMP deaminase [Enterobacteria phage RB14]
 gi|115344026|gb|ABI95035.1| dCMP deaminase [Enterobacteria phage RB32]
 gi|227438542|gb|ACP30855.1| dCMP deaminase [Enterobacteria phage RB14]
 gi|227438819|gb|ACP31131.1| dCMP deaminase [Enterobacteria phage RB51]
 gi|291290435|dbj|BAI83230.1| dCMP deaminase [Enterobacteria phage AR1]
          Length = 193

 Score = 36.2 bits (82), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 20/48 (41%), Positives = 27/48 (56%), Gaps = 2/48 (4%)

Query: 53  HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
           HAE+ AI    R  S   +    +YVTL PC  CA AI+ + I++L Y
Sbjct: 104 HAELNAILFAARNGSS--IEGATMYVTLSPCPDCAKAIAQSGIKKLVY 149


>gi|34558827|gb|AAQ75171.1| riboflavin biosynthesis protein [Alvinella pompejana epibiont 7G3]
          Length = 335

 Score = 36.2 bits (82), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 35/144 (24%), Positives = 59/144 (40%), Gaps = 37/144 (25%)

Query: 1   MKKGNVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           M   ++FM  A++ A    L       VGA+  LN ++++   +R       T+HAE+L 
Sbjct: 1   MLTDDIFMRVAIDRAWEYQLITYPNPAVGALVELNGRVLAVEAHREAG----TSHAEVLV 56

Query: 59  I---------------RMGCRI-------LSQEILPEVDLYVTLEPCTM------CAAAI 90
           +               R+   +       L +       +YVTLEPC+       CA  +
Sbjct: 57  LLRAYEELSNRKIEFNRLDANLAHNFLLSLPRGFFSNCSIYVTLEPCSHTGKTPSCATLL 116

Query: 91  SLARIRRLYYGASNP---KGGGIE 111
           S  + +R+  G  +P     GG+E
Sbjct: 117 SKLKPKRVVVGTLDPISSHSGGVE 140


>gi|118397|sp|P00814|DCTD_BPT2 RecName: Full=Deoxycytidylate deaminase; AltName: Full=dCMP
           deaminase
          Length = 188

 Score = 36.2 bits (82), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 20/48 (41%), Positives = 27/48 (56%), Gaps = 2/48 (4%)

Query: 53  HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
           HAE+ AI    R  S   +    +YVTL PC  CA AI+ + I++L Y
Sbjct: 104 HAELNAILFAARNGSS--IEGATMYVTLSPCPDCAKAIAQSGIKKLVY 149


>gi|255012465|ref|ZP_05284591.1| riboflavin biosynthesis protein ribD [Bacteroides sp. 2_1_7]
          Length = 359

 Score = 36.2 bits (82), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 36/126 (28%), Positives = 55/126 (43%), Gaps = 17/126 (13%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85
           VGAV V   +II    +R    K   AHAE+ AI     +  + +L +  +YV+LEPC+ 
Sbjct: 29  VGAVVVHKGRIIGEGFHR----KCGEAHAEVNAI---ASVKDESLLKDSTIYVSLEPCSH 81

Query: 86  ------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139
                 CA  I    I R+  G  +P       G +    A      E+  G+ E+ +R 
Sbjct: 82  YGKTPPCAELIIRKGIPRVVVGCLDPFPEVSGRGVRMLREAGV----EVVTGVMEEEARA 137

Query: 140 IIQDFF 145
           + + F 
Sbjct: 138 LNKAFM 143


>gi|218962081|ref|YP_001741856.1| riboflavin biosynthesis protein RibD [Candidatus Cloacamonas
           acidaminovorans]
 gi|167730738|emb|CAO81650.1| riboflavin biosynthesis protein RibD [Candidatus Cloacamonas
           acidaminovorans]
          Length = 368

 Score = 36.2 bits (82), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 33/95 (34%), Positives = 47/95 (49%), Gaps = 19/95 (20%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85
           VG+V V NN++IS        L+  + H+EI A++   +      L     +VTLEPC+ 
Sbjct: 30  VGSVIVKNNQVISEGWT----LEYGSDHSEIQALKKAGKKAKDATL-----FVTLEPCSH 80

Query: 86  ------CAAAISLARIRRLYYGASNP----KGGGI 110
                 CA AI  A I+ +Y G  +P    KG GI
Sbjct: 81  YGKTPPCAQAIIDAGIKEVYIGIYDPNPLVKGKGI 115


>gi|311993209|ref|YP_004010075.1| dCMP deaminase [Enterobacteria phage CC31]
 gi|284178047|gb|ADB81713.1| dCMP deaminase [Enterobacteria phage CC31]
          Length = 188

 Score = 36.2 bits (82), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 20/48 (41%), Positives = 27/48 (56%), Gaps = 2/48 (4%)

Query: 53  HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
           HAE+ AI    R  S   +    +YVTL PC  CA AI+ + I++L Y
Sbjct: 96  HAELNAILFAARNGSS--IEGATMYVTLSPCPDCAKAIAQSGIKKLVY 141


>gi|325292783|ref|YP_004278647.1| deoxycytidylate deaminase family protein [Agrobacterium sp. H13-3]
 gi|325060636|gb|ADY64327.1| deoxycytidylate deaminase family protein [Agrobacterium sp. H13-3]
          Length = 210

 Score = 36.2 bits (82), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 18/56 (32%), Positives = 28/56 (50%)

Query: 44  NRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLY 99
           N EL++   H E+ A++    +  +    E+    T EPCTMC +AI+ A     Y
Sbjct: 66  NNELENPLWHGEVHALKRFYELGEKPNTKELIFLSTHEPCTMCMSAITWAGFDNFY 121


>gi|300775167|ref|ZP_07085029.1| riboflavin biosynthesis protein RibD [Chryseobacterium gleum ATCC
           35910]
 gi|300505907|gb|EFK37043.1| riboflavin biosynthesis protein RibD [Chryseobacterium gleum ATCC
           35910]
          Length = 341

 Score = 36.2 bits (82), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 34/111 (30%), Positives = 52/111 (46%), Gaps = 17/111 (15%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57
           M    +++   +E AQ  AL    P   VG+V V N +II    +     K    HAEI 
Sbjct: 1   MNNDELYIKRCIELAQ-KALGKTYPNPLVGSVIVHNGEIIGEGYHH----KAGENHAEIN 55

Query: 58  AIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGA 102
           AI     + +++++PE  +YV+LEPC        CA  I     +++  GA
Sbjct: 56  AIN---SVKNKDLIPESTIYVSLEPCAHYGKTPPCALKIRELGFKKVVIGA 103


>gi|313889107|ref|ZP_07822763.1| riboflavin biosynthesis protein RibD [Peptoniphilus harei
           ACS-146-V-Sch2b]
 gi|312844847|gb|EFR32252.1| riboflavin biosynthesis protein RibD [Peptoniphilus harei
           ACS-146-V-Sch2b]
          Length = 371

 Score = 36.2 bits (82), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 35/107 (32%), Positives = 52/107 (48%), Gaps = 14/107 (13%)

Query: 7   FMSCALEEAQNAALRNEIP--VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           +M  ALE A+    + +    VG V V ++KII +  +    LK    HAE+ AI +  +
Sbjct: 11  YMERALEIAREGTGKTKTNPLVGCVIVKDDKIIGQGAH----LKFGENHAEVNAI-LDAK 65

Query: 65  ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP 105
              ++I     LYV LEPC+       CA  I    IRR+  G ++P
Sbjct: 66  SRGEDIRGAT-LYVNLEPCSHYGKTPPCAERIVKEGIRRVVIGTADP 111


>gi|150010266|ref|YP_001305009.1| riboflavin biosynthesis protein ribD [Parabacteroides distasonis
           ATCC 8503]
 gi|149938690|gb|ABR45387.1| riboflavin biosynthesis protein ribD [Parabacteroides distasonis
           ATCC 8503]
          Length = 359

 Score = 36.2 bits (82), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 36/126 (28%), Positives = 55/126 (43%), Gaps = 17/126 (13%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85
           VGAV V   +II    +R    K   AHAE+ AI     +  + +L +  +YV+LEPC+ 
Sbjct: 29  VGAVVVHKGRIIGEGFHR----KCGEAHAEVNAI---ASVKDESLLKDSTIYVSLEPCSH 81

Query: 86  ------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139
                 CA  I    I R+  G  +P       G +    A      E+  G+ E+ +R 
Sbjct: 82  YGKTPPCAELIIRKGIPRVVVGCLDPFPEVSGRGVRMLREAGV----EVVTGVMEEEARA 137

Query: 140 IIQDFF 145
           + + F 
Sbjct: 138 LNKAFM 143


>gi|145588458|ref|YP_001155055.1| riboflavin biosynthesis protein RibD [Polynucleobacter necessarius
           subsp. asymbioticus QLW-P1DMWA-1]
 gi|145046864|gb|ABP33491.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Polynucleobacter
           necessarius subsp. asymbioticus QLW-P1DMWA-1]
          Length = 371

 Score = 36.2 bits (82), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 41/116 (35%), Positives = 57/116 (49%), Gaps = 18/116 (15%)

Query: 7   FMSCALEEAQNAA-LRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           +M  AL EAQ A  L N  P VG V V + ++I R G+  R      AHAEI AI    +
Sbjct: 9   WMGEALGEAQKALYLANPNPRVGCVIVKDGQVIGR-GHTQRV---GGAHAEIQAI-ADAK 63

Query: 65  ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP----KGGGI 110
              ++I     +YVTLEPC+       C  A+ +AR  ++     +P     GGG+
Sbjct: 64  ANGKDIAGST-IYVTLEPCSHTGRTPPCVNALVVARPAKVIVSMLDPNPLVSGGGL 118


>gi|66808325|ref|XP_637885.1| hypothetical protein DDB_G0286161 [Dictyostelium discoideum AX4]
 gi|60466312|gb|EAL64373.1| hypothetical protein DDB_G0286161 [Dictyostelium discoideum AX4]
          Length = 422

 Score = 36.2 bits (82), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 25/103 (24%), Positives = 53/103 (51%), Gaps = 6/103 (5%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           ++K  +FM  ALE     A+++++   ++ V  +  +  +G  ++E  +   H+E++AI 
Sbjct: 65  LEKHEMFMKIALE----IAIKSKVKFVSIIVSPDDRVLCSGIFSKE--NAILHSELVAIT 118

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
                          +Y T EP ++ ++AI  AR +++ YG+S
Sbjct: 119 NCSSSHKMVTFENHTIYSTAEPDSLSSSAIVWARFKQVVYGSS 161


>gi|323332396|gb|EGA73805.1| Tad3p [Saccharomyces cerevisiae AWRI796]
          Length = 163

 Score = 36.2 bits (82), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 13/39 (33%), Positives = 26/39 (66%)

Query: 73  EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIE 111
           + D+Y+T EPC+MC+ A+  +R+RR+ +     + G ++
Sbjct: 85  DYDVYLTHEPCSMCSMALIHSRVRRVVFLTEMQRTGSLK 123


>gi|313205464|ref|YP_004044121.1| cmp/dcmp deaminase zinc-binding protein [Paludibacter
           propionicigenes WB4]
 gi|312444780|gb|ADQ81136.1| CMP/dCMP deaminase zinc-binding protein [Paludibacter
           propionicigenes WB4]
          Length = 141

 Score = 36.2 bits (82), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 34/98 (34%), Positives = 38/98 (38%), Gaps = 14/98 (14%)

Query: 26  VGAVAVLNNKIISRAGN------------RNRELKDVTAHAEILAIRMGCRILSQEILPE 73
           VGA+ V N  IIS   N             N   K    HAE  AI    R  S      
Sbjct: 30  VGALLVKNQMIISDGYNGTPSGFENKCEDENNVSKPYVLHAEANAISKIAR--SHNSSDN 87

Query: 74  VDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIE 111
             LYVT  PC  CA  I  A I+R+ YG       G+E
Sbjct: 88  ATLYVTASPCIECAKLIIQAGIKRVVYGEKYRIMDGVE 125


>gi|326536349|ref|YP_004300790.1| Cd dCMP deaminase [Acinetobacter phage 133]
 gi|299483430|gb|ADJ19524.1| Cd dCMP deaminase [Acinetobacter phage 133]
          Length = 185

 Score = 36.2 bits (82), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 20/48 (41%), Positives = 27/48 (56%), Gaps = 2/48 (4%)

Query: 53  HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
           HAE+ AI    R  +   +    LYVTL PC  CA AI+ + I++L Y
Sbjct: 93  HAELNAILYAAR--NGTAIEGATLYVTLSPCADCAKAIAQSGIKQLVY 138


>gi|298374645|ref|ZP_06984603.1| riboflavin biosynthesis protein RibD [Bacteroides sp. 3_1_19]
 gi|298269013|gb|EFI10668.1| riboflavin biosynthesis protein RibD [Bacteroides sp. 3_1_19]
          Length = 359

 Score = 36.2 bits (82), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 36/126 (28%), Positives = 55/126 (43%), Gaps = 17/126 (13%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85
           VGAV V   +II    +R    K   AHAE+ AI     +  + +L +  +YV+LEPC+ 
Sbjct: 29  VGAVVVHKGRIIGEGFHR----KCGEAHAEVNAI---ASVKDESLLTDSTIYVSLEPCSH 81

Query: 86  ------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139
                 CA  I    I R+  G  +P       G +    A      E+  G+ E+ +R 
Sbjct: 82  YGKTPPCAELIIRKGIPRVVVGCLDPFPEVSGRGVRMLREAGV----EVVTGVMEEEARA 137

Query: 140 IIQDFF 145
           + + F 
Sbjct: 138 LNKAFM 143


>gi|228475866|ref|ZP_04060576.1| riboflavin biosynthesis protein RibD [Staphylococcus hominis
          SK119]
 gi|314936136|ref|ZP_07843483.1| riboflavin biosynthesis protein RibD [Staphylococcus hominis
          subsp. hominis C80]
 gi|228270021|gb|EEK11491.1| riboflavin biosynthesis protein RibD [Staphylococcus hominis
          SK119]
 gi|313654755|gb|EFS18500.1| riboflavin biosynthesis protein RibD [Staphylococcus hominis
          subsp. hominis C80]
          Length = 347

 Score = 36.2 bits (82), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 25/80 (31%), Positives = 41/80 (51%), Gaps = 11/80 (13%)

Query: 7  FMSCALEEAQNAALRNEI--PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
          FM  A++ AQ    +  +  PVG+V V + +I+    +    LK    HAE+ A+ M   
Sbjct: 4  FMKYAIQLAQMVEGQTGVNPPVGSVVVKDGRIVGLGAH----LKQGEKHAEVQALDM--- 56

Query: 65 ILSQEILPEVDLYVTLEPCT 84
            +Q+      +Y++LEPCT
Sbjct: 57 --AQDKAKGGTIYISLEPCT 74


>gi|325676735|ref|ZP_08156408.1| cytidine/deoxycytidylate deaminase [Rhodococcus equi ATCC 33707]
 gi|325552283|gb|EGD21972.1| cytidine/deoxycytidylate deaminase [Rhodococcus equi ATCC 33707]
          Length = 172

 Score = 36.2 bits (82), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 42/94 (44%), Gaps = 2/94 (2%)

Query: 12  LEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELK-DVTAHAEILAIRMGCRILSQEI 70
           +E A  A L  + P G+V    +   + A +RNR    D T H E    R     LS E 
Sbjct: 28  VELAAEALLAGDEPFGSVLATADGT-AVAEDRNRIADGDSTRHPEFELARWAAENLSAEE 86

Query: 71  LPEVDLYVTLEPCTMCAAAISLARIRRLYYGASN 104
                +Y + E C MCAAA +   + R+ Y AS 
Sbjct: 87  RAGATVYTSGEHCPMCAAAHAWVGLGRIVYVAST 120


>gi|2258167|gb|AAB64529.1| Ylr316cp [Saccharomyces cerevisiae]
 gi|207342844|gb|EDZ70483.1| YLR316Cp-like protein [Saccharomyces cerevisiae AWRI1631]
 gi|323303779|gb|EGA57563.1| Tad3p [Saccharomyces cerevisiae FostersB]
 gi|323307960|gb|EGA61217.1| Tad3p [Saccharomyces cerevisiae FostersO]
 gi|323336362|gb|EGA77630.1| Tad3p [Saccharomyces cerevisiae Vin13]
 gi|323353850|gb|EGA85705.1| Tad3p [Saccharomyces cerevisiae VL3]
          Length = 163

 Score = 36.2 bits (82), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 13/39 (33%), Positives = 26/39 (66%)

Query: 73  EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIE 111
           + D+Y+T EPC+MC+ A+  +R+RR+ +     + G ++
Sbjct: 85  DYDVYLTHEPCSMCSMALIHSRVRRVVFLTEMQRTGSLK 123


>gi|323436092|ref|ZP_08088234.1| riboflavin biosynthesis protein RibD [Dokdonia donghaensis MED134]
 gi|321496407|gb|EAQ38739.2| riboflavin biosynthesis protein RibD [Dokdonia donghaensis MED134]
          Length = 346

 Score = 36.2 bits (82), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 43/158 (27%), Positives = 70/158 (44%), Gaps = 27/158 (17%)

Query: 1   MKKGNVFMSCALEEAQN---AALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57
           +K  N ++   +  A+N   AA+ N   VGAV V NN II+              HAE+ 
Sbjct: 14  VKIHNTYIKRCIALAKNGLPAAMPNP-SVGAVLVHNNTIIAEGYTSAYG----GPHAEVN 68

Query: 58  AIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP----KG 107
            I    +  + E++ +  LYV+LEPC+       CA  +  + I+R+  G  +P     G
Sbjct: 69  CIAFA-KANTPELIAKSTLYVSLEPCSHWGKTPPCADLVIDSGIKRVVIGTIDPFAKVAG 127

Query: 108 GGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
            GI+   Q     T         G+ E+  +++ + FF
Sbjct: 128 AGIKKLMQAGVDVTV--------GVLEKECQEVNKRFF 157


>gi|291617164|ref|YP_003519906.1| RibD [Pantoea ananatis LMG 20103]
 gi|291152194|gb|ADD76778.1| RibD [Pantoea ananatis LMG 20103]
          Length = 162

 Score = 36.2 bits (82), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 31/106 (29%), Positives = 49/106 (46%), Gaps = 17/106 (16%)

Query: 8   MSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M  ALE ++ A    R   PVG V V + +++++   +         HAEI AI      
Sbjct: 1   MMLALEYSRQALPECRPNPPVGCVIVRDGEVVAKGFTQ----PPGQHHAEIDAIAKLTFP 56

Query: 66  LSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP 105
           +S     E ++YVTLEPC+       CA  I+  + + +Y    +P
Sbjct: 57  IS-----ECEIYVTLEPCSFQGRTPSCALTIAELKPKHIYIAMDDP 97


>gi|261867792|ref|YP_003255714.1| riboflavin biosynthesis protein RibD [Aggregatibacter
           actinomycetemcomitans D11S-1]
 gi|261413124|gb|ACX82495.1| riboflavin biosynthesis protein RibD [Aggregatibacter
           actinomycetemcomitans D11S-1]
          Length = 374

 Score = 36.2 bits (82), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 39/151 (25%), Positives = 61/151 (40%), Gaps = 21/151 (13%)

Query: 7   FMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           FM  AL+ A+           VG V V N KI+ +  +     K    HAE++A+R    
Sbjct: 12  FMQLALDLAKQGEFTTTPNPSVGCVLVKNGKIVGKGFH----FKAGEPHAEVMALRE--- 64

Query: 65  ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
             + E       YVTLEPC+       CA  +  A + ++     +P       G Q   
Sbjct: 65  --AGENARGATAYVTLEPCSHFGRTPPCAKGLVEAGVSKVIAAMCDPNPQVAGKGLQILA 122

Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
            A    +     G+ E+++ Q+ + F K  R
Sbjct: 123 DAGIQSA----VGLLEEKAEQLNKGFLKRMR 149


>gi|118445111|ref|YP_879181.1| riboflavin biosynthesis protein RibD [Clostridium novyi NT]
 gi|118135567|gb|ABK62611.1| riboflavin biosynthesis protein RibD [Clostridium novyi NT]
          Length = 377

 Score = 36.2 bits (82), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 39/135 (28%), Positives = 60/135 (44%), Gaps = 35/135 (25%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85
           VGAV V +NKII +  +         AHAE+ A++      + E +    +YVTLEPC+ 
Sbjct: 31  VGAVIVKDNKIIGQGYHERFG----GAHAEVNALKN-----ATEDVTGATMYVTLEPCSH 81

Query: 86  ------CAAAISLARIRRLYYGASNPK----GGGI----ENGTQFYTLATCHHSPEIYPG 131
                 CA  I  + I+ +  G  +P     G GI    ENG +            +  G
Sbjct: 82  YGKTPPCANTIVKSGIKEVIVGMRDPNELVAGRGINILKENGIK------------VIVG 129

Query: 132 ISEQRSRQIIQDFFK 146
           + E+  ++I + F K
Sbjct: 130 VFEEEIKKINEIFIK 144


>gi|331001110|ref|ZP_08324741.1| riboflavin biosynthesis protein RibD [Parasutterella
           excrementihominis YIT 11859]
 gi|329569415|gb|EGG51193.1| riboflavin biosynthesis protein RibD [Parasutterella
           excrementihominis YIT 11859]
          Length = 355

 Score = 36.2 bits (82), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 35/134 (26%), Positives = 58/134 (43%), Gaps = 24/134 (17%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85
           VG V V + +II     +    K   AHAE++A+R        E +    +YVTLEPC+ 
Sbjct: 21  VGCVIVKDRRIIGEGFTQ----KTGEAHAEVMALRDAAS--RGESVAGATVYVTLEPCSH 74

Query: 86  ------CAAAISLARIRRLYYGASNPK----GGGIENGTQFYTLATCHHSPEIYPGISEQ 135
                 CA A+  A++ R+     +P     G G++   +      C        G+  +
Sbjct: 75  YGRTPPCALALKNAKVARVVAALKDPNPLVAGKGLKMLEEAGVKVEC--------GLEAE 126

Query: 136 RSRQIIQDFFKERR 149
            + +I + F K +R
Sbjct: 127 EAEEINRGFLKRQR 140


>gi|269839638|ref|YP_003324330.1| riboflavin biosynthesis protein RibD [Thermobaculum terrenum ATCC
           BAA-798]
 gi|269791368|gb|ACZ43508.1| riboflavin biosynthesis protein RibD [Thermobaculum terrenum ATCC
           BAA-798]
          Length = 364

 Score = 36.2 bits (82), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 42/150 (28%), Positives = 63/150 (42%), Gaps = 21/150 (14%)

Query: 8   MSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M  ALE A++A  R      VGAV V +  +I +   +         HAE++A+      
Sbjct: 1   MRRALELAESALGRTWPNPAVGAVVVRDGLVIGKGATQ----PPGGPHAEVVALAEAGEA 56

Query: 66  LSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
               IL     YVTLEPC+       C  AI  A +R ++    +P       G      
Sbjct: 57  ARGAIL-----YVTLEPCSHWGRTPPCTEAIIRAGVREVHAATLDPNPKVHGRGVAQLRE 111

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
           A      E++ G+ E+ + +I + FFK  R
Sbjct: 112 AGI----EVHLGLCEREATRINEGFFKRVR 137


>gi|86134833|ref|ZP_01053415.1| Deoxycytidylate deaminase [Polaribacter sp. MED152]
 gi|85821696|gb|EAQ42843.1| Deoxycytidylate deaminase [Polaribacter sp. MED152]
          Length = 141

 Score = 36.2 bits (82), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 34/123 (27%), Positives = 51/123 (41%), Gaps = 15/123 (12%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGN------------RNRELK 48
           +K    ++  ALE  + +  + +  VGA+ V +  IIS   N             N   K
Sbjct: 7   LKYDKAYLRMALEWGKLSHCKRK-QVGALIVKDRMIISDGFNGTPTGFDNCCEDENGATK 65

Query: 49  DVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGG 108
               HAE  AI       S +      LY+TL PCT C+  I  A I+R+ Y  +     
Sbjct: 66  WEVLHAEANAILKVAS--STQSAKNATLYITLSPCTQCSKLIHQAGIKRVVYANAYKDPS 123

Query: 109 GIE 111
           G++
Sbjct: 124 GLD 126


>gi|209879740|ref|XP_002141310.1| cytidine/deoxycytidylate deaminase family protein [Cryptosporidium
           muris RN66]
 gi|209556916|gb|EEA06961.1| cytidine/deoxycytidylate deaminase family protein [Cryptosporidium
           muris RN66]
          Length = 314

 Score = 36.2 bits (82), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 13/53 (24%), Positives = 32/53 (60%)

Query: 77  YVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIY 129
           Y++ EPC  C+ A+  +RI +++Y  +N + GG+ +  + + + + +H   ++
Sbjct: 256 YLSHEPCVSCSMALLHSRISQVFYEYTNNESGGLGSRCKLHCITSLNHHFTVF 308


>gi|320585958|gb|EFW98637.1| ribonuclease [Grosmannia clavigera kw1407]
          Length = 974

 Score = 36.2 bits (82), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 15/37 (40%), Positives = 24/37 (64%)

Query: 74  VDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI 110
           ++LYVT EPC MC+ AI  +R+ ++ +    P  GG+
Sbjct: 384 LELYVTHEPCAMCSMAILHSRMGKVVFANRMPLTGGL 420


>gi|218289836|ref|ZP_03494036.1| riboflavin biosynthesis protein RibD [Alicyclobacillus
           acidocaldarius LAA1]
 gi|218240127|gb|EED07312.1| riboflavin biosynthesis protein RibD [Alicyclobacillus
           acidocaldarius LAA1]
          Length = 371

 Score = 36.2 bits (82), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 43/156 (27%), Positives = 69/156 (44%), Gaps = 27/156 (17%)

Query: 1   MKKGNVFMSCALEEA---QNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57
           M +   +M  ALE A   +     N + VGA+ V    ++ +  +    L   T HAE+ 
Sbjct: 1   MTEDERYMRMALEVARLGEGQTSPNPM-VGAIVVNGGLVVGQGAH----LMAGTPHAEVH 55

Query: 58  AIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGA--SNPKGGG 109
           A+RM     + +      LYVTLEPC        C  AI  + +RR+   A   +P+  G
Sbjct: 56  ALRM-----AGDAAKGATLYVTLEPCNHHGRTPPCTDAILASGVRRVVVAALDVDPRTAG 110

Query: 110 IENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
           +  G +    A      E+  G+ E  +R++ + FF
Sbjct: 111 L--GVKRLQDAGL----EVSVGVLEVEARELNRHFF 140


>gi|293366290|ref|ZP_06612971.1| riboflavin biosynthesis protein RibD [Staphylococcus epidermidis
           M23864:W2(grey)]
 gi|291319592|gb|EFE59957.1| riboflavin biosynthesis protein RibD [Staphylococcus epidermidis
           M23864:W2(grey)]
          Length = 343

 Score = 36.2 bits (82), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 38/87 (43%), Gaps = 17/87 (19%)

Query: 25  PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM-GCRILSQEILPEVDLYVTLEPC 83
           PVG+V V N +I+    +    LK    HAE+ AI M G       I      YV+LEPC
Sbjct: 20  PVGSVVVKNGRIVGLGAH----LKKGDKHAEVQAIEMAGLNTQGATI------YVSLEPC 69

Query: 84  TM------CAAAISLARIRRLYYGASN 104
           T       C   I  A I ++ Y   +
Sbjct: 70  THHGSTPPCVHKIIEAGISKVIYAVKD 96


>gi|281204851|gb|EFA79046.1| hypothetical protein PPL_08516 [Polysphondylium pallidum PN500]
          Length = 246

 Score = 36.2 bits (82), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 33/111 (29%), Positives = 48/111 (43%), Gaps = 16/111 (14%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           +M  AL  A    L  E P GA+ V  ++N I     N   +  +V +H EI A     +
Sbjct: 48  YMRIAL--AFGVTLNRERPYGAIIVNHVSNNISCYGVNSGND--NVLSHGEIAAFNNCTK 103

Query: 65  IL-----SQEILPEVD-----LYVTLEPCTMCAAAISLARIRRLYYGASNP 105
           +      +    P ++     LY + EPC MCAAA     + R+ YG   P
Sbjct: 104 LYPSPTGNDRTNPGINWANHTLYTSAEPCPMCAAASVWRGLGRMVYGTDIP 154


>gi|157694276|ref|YP_001488738.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Bacillus pumilus SAFR-032]
 gi|157683034|gb|ABV64178.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Bacillus pumilus SAFR-032]
          Length = 363

 Score = 36.2 bits (82), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 33/109 (30%), Positives = 53/109 (48%), Gaps = 21/109 (19%)

Query: 7   FMSCALEEAQNAALRNEIP----VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
           +M+ ALE A+  A++ +      VGAV V  N+I+    +    +K    HAEI A++M 
Sbjct: 7   YMNLALENAR--AMKGQTSPNPLVGAVIVRENEIVGVGAH----MKAGEPHAEIHALKM- 59

Query: 63  CRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP 105
               + +      +YVTLEPC+       CA A+  A +  +   A +P
Sbjct: 60  ----AGDKAKGATIYVTLEPCSHHGRTGPCAEALVKAGVETVVVAALDP 104


>gi|161622500|ref|YP_001595339.1| Cd dCMP deaminase [Enterobacteria phage JS98]
 gi|238695364|ref|YP_002922557.1| Cd dCMP deaminase [Enterobacteria phage JS10]
 gi|160213806|gb|ABX11145.1| Cd dCMP deaminase [Enterobacteria phage JS98]
 gi|220029500|gb|ACL78434.1| Cd dCMP deaminase [Enterobacteria phage JS10]
          Length = 181

 Score = 35.8 bits (81), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 22/58 (37%), Positives = 30/58 (51%), Gaps = 5/58 (8%)

Query: 53  HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGA---SNPKG 107
           HAE+ AI    R  S   +    +YVTL PC  CA +I+ + I+ L Y      NP+G
Sbjct: 92  HAELNAILFAARTGSS--IDGATMYVTLSPCADCAKSIAQSGIKTLVYAELYDRNPEG 147


>gi|229916731|ref|YP_002885377.1| riboflavin biosynthesis protein RibD [Exiguobacterium sp. AT1b]
 gi|229468160|gb|ACQ69932.1| riboflavin biosynthesis protein RibD [Exiguobacterium sp. AT1b]
          Length = 354

 Score = 35.8 bits (81), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 33/107 (30%), Positives = 50/107 (46%), Gaps = 17/107 (15%)

Query: 7   FMSCALEEAQNAALRNEIP--VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           +M  A++ A++A  +  +   VGAV V + +I+    +    LK    HAE+ AIRM   
Sbjct: 4   YMEQAIQLAKSADGQTGVNPLVGAVLVKDGRIVGMGAH----LKAGEPHAEVHAIRMAGA 59

Query: 65  ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP 105
                 L     YVTLEPC+       CA  I  + I+R+     +P
Sbjct: 60  AAYGATL-----YVTLEPCSHHGKTPPCADLIVESGIKRVVIAMKDP 101


>gi|138895866|ref|YP_001126319.1| riboflavin biosynthesis protein RibD [Geobacillus
           thermodenitrificans NG80-2]
 gi|134267379|gb|ABO67574.1| Riboflavin biosynthesis protein RibD [Geobacillus
           thermodenitrificans NG80-2]
          Length = 359

 Score = 35.8 bits (81), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 29/86 (33%), Positives = 41/86 (47%), Gaps = 15/86 (17%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85
           VGAV V +  I+    +    LK    HAE+ AIRM     + E      +YVTLEPC+ 
Sbjct: 21  VGAVVVNDGTIVGIGAH----LKAGEPHAEVHAIRM-----AGEKARGATVYVTLEPCSH 71

Query: 86  ------CAAAISLARIRRLYYGASNP 105
                 CA  +  A +RR+    ++P
Sbjct: 72  YGKTPPCADLLIEAGVRRVVVATTDP 97


>gi|76798747|ref|ZP_00780965.1| riboflavin biosynthesis protein RibD [Streptococcus agalactiae
           18RS21]
 gi|76585902|gb|EAO62442.1| riboflavin biosynthesis protein RibD [Streptococcus agalactiae
           18RS21]
          Length = 362

 Score = 35.8 bits (81), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 33/106 (31%), Positives = 54/106 (50%), Gaps = 17/106 (16%)

Query: 8   MSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M+ AL+EA+     +     VGAV V +++IIS+    ++   D+  HAE  AI+     
Sbjct: 1   MALALKEAEKGMGFVAPNPLVGAVIVKDDRIISKG--YHKRFGDL--HAERQAIKN---- 52

Query: 66  LSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP 105
            + E +    LYVTLEPC        C  A+  + I+++  G+ +P
Sbjct: 53  -ADEDISGSTLYVTLEPCCHVGKQPPCTEALIKSGIKKVVVGSLDP 97


>gi|299779161|ref|YP_003734355.1| Cd dCMP deaminase [Enterobacteria phage IME08]
 gi|298105890|gb|ADI55534.1| Cd dCMP deaminase [Enterobacteria phage IME08]
          Length = 181

 Score = 35.8 bits (81), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 22/58 (37%), Positives = 30/58 (51%), Gaps = 5/58 (8%)

Query: 53  HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGA---SNPKG 107
           HAE+ AI    R  S   +    +YVTL PC  CA +I+ + I+ L Y      NP+G
Sbjct: 92  HAELNAILFAARTGSS--IDGATMYVTLSPCADCAKSIAQSGIKTLVYAELYDRNPEG 147


>gi|293390135|ref|ZP_06634469.1| riboflavin biosynthesis protein RibD [Aggregatibacter
           actinomycetemcomitans D7S-1]
 gi|290950669|gb|EFE00788.1| riboflavin biosynthesis protein RibD [Aggregatibacter
           actinomycetemcomitans D7S-1]
          Length = 374

 Score = 35.8 bits (81), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 39/151 (25%), Positives = 61/151 (40%), Gaps = 21/151 (13%)

Query: 7   FMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           FM  AL+ A+           VG V V N KI+ +  +     K    HAE++A+R    
Sbjct: 12  FMQLALDLAKQGEFTTTPNPSVGCVLVKNGKIVGKGFH----FKAGEPHAEVMALRE--- 64

Query: 65  ILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
             + E       YVTLEPC        CA  ++ A + ++     +P       G Q   
Sbjct: 65  --AGENARGATAYVTLEPCFHFGRTPPCAKGLAEAGVSKVIAAMYDPNPQVAGKGLQILA 122

Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
            A    +     G+ E+++ Q+ + F K  R
Sbjct: 123 DAGIQSA----VGLLEEKAEQLNKGFLKRMR 149


>gi|253743502|gb|EES99877.1| Hypothetical protein GL50581_2888 [Giardia intestinalis ATCC 50581]
          Length = 282

 Score = 35.8 bits (81), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 15/50 (30%), Positives = 23/50 (46%)

Query: 75  DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
           D++   EPC  C+  +  ARIRR++Y       GG+        L   +H
Sbjct: 225 DVFTLEEPCIFCSMCLLHARIRRVFYSVPMEHNGGLNESLMVPALPGVNH 274


>gi|328952293|ref|YP_004369627.1| riboflavin biosynthesis protein RibD [Desulfobacca acetoxidans DSM
           11109]
 gi|328452617|gb|AEB08446.1| riboflavin biosynthesis protein RibD [Desulfobacca acetoxidans DSM
           11109]
          Length = 362

 Score = 35.8 bits (81), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 35/94 (37%), Positives = 42/94 (44%), Gaps = 19/94 (20%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85
           VGAV V +  I+ R  +R         HAE+ A+R      SQ       LYVTLEPC  
Sbjct: 21  VGAVVVRDGYIVGRGYHRRYG----GPHAEVEALRQAG---SQA--DGATLYVTLEPCNH 71

Query: 86  ------CAAAISLARIRRLYYGASNPK----GGG 109
                 C  AI  A IRR+    S+P     GGG
Sbjct: 72  YGQTPPCTEAILAAGIRRVVIANSDPNPHVAGGG 105


>gi|313768407|ref|YP_004062087.1| hypothetical protein MpV1_204 [Micromonas sp. RCC1109 virus MpV1]
 gi|312599103|gb|ADQ91127.1| hypothetical protein MpV1_204 [Micromonas sp. RCC1109 virus MpV1]
          Length = 145

 Score = 35.8 bits (81), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 31/103 (30%), Positives = 51/103 (49%), Gaps = 16/103 (15%)

Query: 12  LEEAQNAALRN---EIPVGAVAVLNNKIISRAGN-------RNRELKD----VTAHAEIL 57
           ++ AQ A++R+    + VG V V NN++IS   N           ++D     T HAEI 
Sbjct: 12  MQTAQLASVRSPCERLKVGCVLVKNNRLISMGYNGFLGGCEHKSIVRDGHEQATIHAEIN 71

Query: 58  AIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
           AI    +  +   + +   YVT  PC  C  A++ + I+++YY
Sbjct: 72  AITDAAKRGAS--IDDCVAYVTHYPCLNCYKALASSGIKKVYY 112


>gi|237715308|ref|ZP_04545789.1| riboflavin biosynthesis protein ribD [Bacteroides sp. D1]
 gi|294643551|ref|ZP_06721357.1| riboflavin biosynthesis protein RibD [Bacteroides ovatus SD CC 2a]
 gi|294807058|ref|ZP_06765877.1| riboflavin biosynthesis protein RibD [Bacteroides xylanisolvens SD
           CC 1b]
 gi|229444617|gb|EEO50408.1| riboflavin biosynthesis protein ribD [Bacteroides sp. D1]
 gi|292641126|gb|EFF59338.1| riboflavin biosynthesis protein RibD [Bacteroides ovatus SD CC 2a]
 gi|294445757|gb|EFG14405.1| riboflavin biosynthesis protein RibD [Bacteroides xylanisolvens SD
           CC 1b]
          Length = 345

 Score = 35.8 bits (81), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 42/148 (28%), Positives = 66/148 (44%), Gaps = 21/148 (14%)

Query: 7   FMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
           +M   +E A+N  L N  P   VGAV V + +II    +    ++   AHAE+ AI    
Sbjct: 6   YMRRCIELAKNG-LCNVSPNPMVGAVIVCDGRIIGEGYH----IRCGEAHAEVNAIH--- 57

Query: 64  RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFY 117
            +  + +L    +YV+LEPC+       CA  I   +I R+  G  +P       G Q  
Sbjct: 58  SVKDESLLKRSTIYVSLEPCSHYGKTPPCADLIIEKQIPRIVIGCQDPFSEVAGRGIQKL 117

Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDFF 145
             A      E+  G+ E+  + +I+ F 
Sbjct: 118 RDA----GREVSVGVLEEECKSLIRRFI 141


>gi|182417348|ref|ZP_02948682.1| riboflavin biosynthesis protein RibD [Clostridium butyricum 5521]
 gi|237668576|ref|ZP_04528560.1| riboflavin biosynthesis protein RibD [Clostridium butyricum E4 str.
           BoNT E BL5262]
 gi|182378778|gb|EDT76300.1| riboflavin biosynthesis protein RibD [Clostridium butyricum 5521]
 gi|237656924|gb|EEP54480.1| riboflavin biosynthesis protein RibD [Clostridium butyricum E4 str.
           BoNT E BL5262]
          Length = 360

 Score = 35.8 bits (81), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 41/148 (27%), Positives = 66/148 (44%), Gaps = 21/148 (14%)

Query: 7   FMSCALEEA-QNAALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           +M  ALE A +   + N  P VGAV V +NK+I    +     K   AHAE  A++    
Sbjct: 5   YMKRALELAIKGVGMVNPNPMVGAVIVKDNKVIGEGFHE----KYGHAHAERNAVKNAV- 59

Query: 65  ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
               E +    +YVTLEPC        C   +   ++R++  G  +P    +  G     
Sbjct: 60  ----EDIEGATVYVTLEPCAHYGKTPPCVDLLIEKKVRKVVIGMLDP--NPLVAGKSIKK 113

Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFK 146
           L    ++ E+  G+ E+  R++ + F K
Sbjct: 114 LK--ENNIEVKVGVKEKECRKLNEVFIK 139


>gi|262405149|ref|ZP_06081699.1| riboflavin biosynthesis protein RibD [Bacteroides sp. 2_1_22]
 gi|262356024|gb|EEZ05114.1| riboflavin biosynthesis protein RibD [Bacteroides sp. 2_1_22]
          Length = 351

 Score = 35.8 bits (81), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 42/148 (28%), Positives = 66/148 (44%), Gaps = 21/148 (14%)

Query: 7   FMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
           +M   +E A+N  L N  P   VGAV V + +II    +    ++   AHAE+ AI    
Sbjct: 12  YMRRCIELAKNG-LCNVSPNPMVGAVIVCDGRIIGEGYH----IRCGEAHAEVNAIH--- 63

Query: 64  RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFY 117
            +  + +L    +YV+LEPC+       CA  I   +I R+  G  +P       G Q  
Sbjct: 64  SVKDESLLKRSTIYVSLEPCSHYGKTPPCADLIIEKQIPRIVIGCQDPFSEVAGRGIQKL 123

Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDFF 145
             A      E+  G+ E+  + +I+ F 
Sbjct: 124 RDA----GREVSVGVLEEECKSLIRRFI 147


>gi|257413677|ref|ZP_04743810.2| riboflavin biosynthesis protein RibD [Roseburia intestinalis L1-82]
 gi|257202725|gb|EEV01010.1| riboflavin biosynthesis protein RibD [Roseburia intestinalis L1-82]
          Length = 173

 Score = 35.8 bits (81), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 35/117 (29%), Positives = 50/117 (42%), Gaps = 20/117 (17%)

Query: 2   KKGNVFM--------SCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAH 53
           +KG VFM        +  L E      +    VGAV V  ++II      +++   + A 
Sbjct: 25  RKGKVFMQQERYMRRAMELAELGRGWTKTNPVVGAVLVKEDRIIGEG--YHKKFGGLHAE 82

Query: 54  AEILAIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASN 104
            E LA    CR   ++     DLYVTLEPC        C  A+  A I  ++ GA +
Sbjct: 83  REALA---DCRSRGEDP-AGADLYVTLEPCCHYGKTPPCTQAVIEAGISHVFVGAED 135


>gi|77409347|ref|ZP_00786049.1| riboflavin biosynthesis protein RibD [Streptococcus agalactiae
           COH1]
 gi|77172049|gb|EAO75216.1| riboflavin biosynthesis protein RibD [Streptococcus agalactiae
           COH1]
          Length = 362

 Score = 35.8 bits (81), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 33/106 (31%), Positives = 54/106 (50%), Gaps = 17/106 (16%)

Query: 8   MSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M+ AL+EA+     +     VGAV V +++IIS+    ++   D+  HAE  AI+     
Sbjct: 1   MALALKEAEKGMGFVAPNPLVGAVIVKDDRIISKG--YHKRFGDL--HAERQAIKN---- 52

Query: 66  LSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP 105
            + E +    LYVTLEPC        C  A+  + I+++  G+ +P
Sbjct: 53  -ADEDISGSTLYVTLEPCCHVGKQPPCTEALIKSGIKKVVVGSLDP 97


>gi|302907570|ref|XP_003049675.1| predicted protein [Nectria haematococca mpVI 77-13-4]
 gi|256730611|gb|EEU43962.1| predicted protein [Nectria haematococca mpVI 77-13-4]
          Length = 433

 Score = 35.8 bits (81), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 13/39 (33%), Positives = 24/39 (61%)

Query: 74  VDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN 112
           ++LYVT EPC  C+  I  +R+ ++ +    P+ GG+ +
Sbjct: 350 LELYVTHEPCVSCSMGILHSRMGKVVFATHMPRSGGLSS 388


>gi|330752436|emb|CBL87386.1| riboflavin biosynthesis protein [uncultured Flavobacteria
           bacterium]
          Length = 310

 Score = 35.8 bits (81), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 22/60 (36%), Positives = 32/60 (53%), Gaps = 9/60 (15%)

Query: 52  AHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP 105
           +HAE+ AI+    + +QE+L    LYVTLEPC+       C   I   +I R+  G  +P
Sbjct: 24  SHAEVNAIK---SVKNQELLKSATLYVTLEPCSHHGKTPPCCDLILSRQIPRVVIGCIDP 80


>gi|88801568|ref|ZP_01117096.1| deoxycytidylate deaminase [Polaribacter irgensii 23-P]
 gi|88782226|gb|EAR13403.1| deoxycytidylate deaminase [Polaribacter irgensii 23-P]
          Length = 141

 Score = 35.8 bits (81), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 36/128 (28%), Positives = 55/128 (42%), Gaps = 25/128 (19%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIIS----------------RAGNRN 44
           +K    ++  ALE  + +  + +  VGA+ V N  IIS                 +GN  
Sbjct: 7   LKYDRAYLKMALEWGKLSHCKRK-QVGALIVKNRMIISDGFNGTPTGFENCCEDSSGNTK 65

Query: 45  RELKDVTAHAEILAIRMGCRILSQEILPE-VDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
            E+     HAE  AI    ++ S     E   LY+TL PCT C+  I  A I+R+ Y  +
Sbjct: 66  WEV----LHAEANAI---LKVASSTQSAEGATLYITLSPCTQCSKLIHQAGIKRVVYANA 118

Query: 104 NPKGGGIE 111
                G++
Sbjct: 119 YKDDAGLK 126


>gi|145589924|ref|YP_001156521.1| CMP/dCMP deaminase, zinc-binding [Polynucleobacter necessarius
           subsp. asymbioticus QLW-P1DMWA-1]
 gi|145048330|gb|ABP34957.1| CMP/dCMP deaminase, zinc-binding protein [Polynucleobacter
           necessarius subsp. asymbioticus QLW-P1DMWA-1]
          Length = 186

 Score = 35.8 bits (81), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 24/82 (29%), Positives = 40/82 (48%), Gaps = 6/82 (7%)

Query: 25  PVGAVAVLNNK---IISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81
           P GA A+ N+K   I+++    N+   +   H E++ I         +    + LY T E
Sbjct: 54  PFGA-AITNSKSGKILAQG--VNKTFSNPVLHGEMVCINQYVAQHGNQGWANLILYTTGE 110

Query: 82  PCTMCAAAISLARIRRLYYGAS 103
           PC MC +A+  + I  + YG+S
Sbjct: 111 PCPMCMSALIWSGIGGVVYGSS 132


>gi|198273955|ref|ZP_03206487.1| hypothetical protein BACPLE_00091 [Bacteroides plebeius DSM 17135]
 gi|198273033|gb|EDY97302.1| hypothetical protein BACPLE_00091 [Bacteroides plebeius DSM 17135]
          Length = 346

 Score = 35.8 bits (81), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 36/125 (28%), Positives = 55/125 (44%), Gaps = 17/125 (13%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85
           VGAV V + KII         ++    HAE+ AI     +  + +L +  +YV+LEPC+ 
Sbjct: 28  VGAVIVRDGKIIGEG----YHVRCGEGHAEVNAI---ASVKDESLLKDATIYVSLEPCSH 80

Query: 86  ------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139
                 CA  I    I R+  G  +P       G Q    A      E+  G+ E+  R+
Sbjct: 81  YGKTPPCADLIIRKGIPRVVVGCVDPFSLVAGRGIQKLRDAGI----EVTVGVLEKECRE 136

Query: 140 IIQDF 144
           +I+ F
Sbjct: 137 LIRAF 141


>gi|134096905|ref|YP_001102566.1| cytidine/deoxycytidylate deaminase, zinc-binding region
           [Saccharopolyspora erythraea NRRL 2338]
 gi|291006653|ref|ZP_06564626.1| cytidine/deoxycytidylate deaminase, zinc-binding region
           [Saccharopolyspora erythraea NRRL 2338]
 gi|133909528|emb|CAL99640.1| cytidine/deoxycytidylate deaminase, zinc-binding region
           [Saccharopolyspora erythraea NRRL 2338]
          Length = 159

 Score = 35.8 bits (81), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 23/91 (25%), Positives = 43/91 (47%), Gaps = 1/91 (1%)

Query: 11  ALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQE 69
           A+E +  A    + P G++ V  +  +++   N  R  +D++AH E+       R L   
Sbjct: 12  AIELSARARESGDEPFGSLLVGPDGAVLAEDVNTVRTDRDISAHPELKLAVWAARHLDPA 71

Query: 70  ILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
                 +Y + E C MC+AA+  + + RL +
Sbjct: 72  TSAATTMYTSCENCAMCSAAMVSSGVGRLVF 102


>gi|159038151|ref|YP_001537404.1| CMP/dCMP deaminase zinc-binding [Salinispora arenicola CNS-205]
 gi|157916986|gb|ABV98413.1| CMP/dCMP deaminase zinc-binding [Salinispora arenicola CNS-205]
          Length = 162

 Score = 35.8 bits (81), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 29/96 (30%), Positives = 39/96 (40%), Gaps = 11/96 (11%)

Query: 21  RNEIPVGAVAVLNNKIISRAGNRNRE----LKDVTAHAEILAIRMGCRILSQEILPEVDL 76
           R   PVG    +   I++ AG++  E      D   HAE  A+    R+     L    L
Sbjct: 20  RGSSPVGTAYSVGAIIVAAAGDQLTEGYSRDTDAHTHAEESAVAKVERLAPHPDLTGATL 79

Query: 77  YVTLEPCT-------MCAAAISLARIRRLYYGASNP 105
           Y ++EPCT        C   I  A IRR+ Y    P
Sbjct: 80  YSSMEPCTSRKSRPRTCTELILAAGIRRVVYALREP 115


>gi|439727|emb|CAA52372.1| hygromycin phosphotransferase [Burkholderia pseudomallei]
 gi|1094885|prf||2107161A glpA gene
          Length = 420

 Score = 35.8 bits (81), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 21/68 (30%), Positives = 35/68 (51%), Gaps = 3/68 (4%)

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLY-YGASNPKGGGIENGTQFYTLATCHHSP 126
           ++ LPE +L   L+PCT  A AI+ A +     +    P+G G E  T +     C+  P
Sbjct: 275 EQDLPETELPAVLQPCTGMAHAIAAADLSHTSGFAPFGPQGMGQE--TPWRDKRDCYFDP 332

Query: 127 EIYPGISE 134
           ++Y  +S+
Sbjct: 333 QVYYWLSQ 340


>gi|255729574|ref|XP_002549712.1| hypothetical protein CTRG_04009 [Candida tropicalis MYA-3404]
 gi|240132781|gb|EER32338.1| hypothetical protein CTRG_04009 [Candida tropicalis MYA-3404]
          Length = 325

 Score = 35.8 bits (81), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 15/37 (40%), Positives = 22/37 (59%)

Query: 76  LYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN 112
           +Y T EPC MC  A+  +RI R+ Y  +    GG+E+
Sbjct: 248 VYTTHEPCIMCCMALVHSRIARVTYINTAKNSGGLES 284


>gi|221059810|ref|XP_002260550.1| Cytidine and deoxycytidylate deaminase-like protein [Plasmodium
           knowlesi strain H]
 gi|193810624|emb|CAQ42522.1| Cytidine and deoxycytidylate deaminase-like protein, putative
           [Plasmodium knowlesi strain H]
          Length = 365

 Score = 35.8 bits (81), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 14/56 (25%), Positives = 31/56 (55%)

Query: 77  YVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGI 132
           Y++ EPC MCA A+  +RI+ + +   N   G + +  + +++   +H  ++Y  +
Sbjct: 306 YLSHEPCFMCAMAMVHSRIKCVIFDELNRDNGALFSRAKLHSVKNLNHHFKVYKTV 361


>gi|254787586|ref|YP_003075015.1| riboflavin biosynthesis protein RibD [Teredinibacter turnerae
           T7901]
 gi|237683563|gb|ACR10827.1| riboflavin biosynthesis protein RibD [Teredinibacter turnerae
           T7901]
          Length = 363

 Score = 35.8 bits (81), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 37/110 (33%), Positives = 51/110 (46%), Gaps = 17/110 (15%)

Query: 5   NVFMSCAL---EEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
            VFM  AL   EE  N    N   VG V V +  +I   G  +R  +    HAE+ A++ 
Sbjct: 8   TVFMQQALRLAEEGLNTTTPNPR-VGCVLVKDGVVIGE-GYHHRAGE---PHAEVNALK- 61

Query: 62  GCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP 105
              ++ ++ L     YVTLEPC+       CA A+  A I RL Y   +P
Sbjct: 62  --SVIDRQQLAGATAYVTLEPCSHTGKTGPCADALVDAGIGRLVYAMEDP 109


>gi|262382448|ref|ZP_06075585.1| riboflavin biosynthesis protein RibD [Bacteroides sp. 2_1_33B]
 gi|262295326|gb|EEY83257.1| riboflavin biosynthesis protein RibD [Bacteroides sp. 2_1_33B]
          Length = 345

 Score = 35.8 bits (81), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 36/126 (28%), Positives = 55/126 (43%), Gaps = 17/126 (13%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85
           VGAV V   +II    +R    K   AHAE+ AI     +  + +L +  +YV+LEPC+ 
Sbjct: 29  VGAVVVHKGRIIGEGFHR----KCGEAHAEVNAI---ASVKDESLLKDSTIYVSLEPCSH 81

Query: 86  ------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139
                 CA  I    I R+  G  +P       G +    A      E+  G+ E+ +R 
Sbjct: 82  YGKTPPCAELIIRKGIPRVVVGCLDPFPEVSGRGVRMLREAGV----EVVTGVMEEEARV 137

Query: 140 IIQDFF 145
           + + F 
Sbjct: 138 LNKAFM 143


>gi|260900445|ref|ZP_05908840.1| conserved hypothetical protein [Vibrio parahaemolyticus AQ4037]
 gi|308106996|gb|EFO44536.1| conserved hypothetical protein [Vibrio parahaemolyticus AQ4037]
 gi|328470945|gb|EGF41856.1| putative deoxycytidylate deaminase [Vibrio parahaemolyticus 10329]
          Length = 154

 Score = 35.8 bits (81), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 31/87 (35%), Positives = 40/87 (45%), Gaps = 18/87 (20%)

Query: 26  VGAVAVLNNKIISRAGN------------RNRELKDV-TAHAEILAIRMGCRILSQEILP 72
           VGAV    N+I+S   N              RELK + T HAE  AI     + S+  L 
Sbjct: 27  VGAVITKQNRIVSVGFNGYPHGVSDSVDTDERELKYLKTLHAEENAI-----LFSKRDLD 81

Query: 73  EVDLYVTLEPCTMCAAAISLARIRRLY 99
             D++VT  PC  CAA I    I R++
Sbjct: 82  GCDIWVTHFPCPNCAAKIIQTGISRVH 108


>gi|46138639|ref|XP_391010.1| hypothetical protein FG10834.1 [Gibberella zeae PH-1]
          Length = 173

 Score = 35.8 bits (81), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 30/102 (29%), Positives = 45/102 (44%), Gaps = 11/102 (10%)

Query: 11  ALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELK--------DVTAHAEILAIRM 61
           A+  A  A    + P G+V V  +NK++    +RNR +         D T H E    R 
Sbjct: 13  AVSLAHEALKAGDAPFGSVLVSSDNKVLQT--DRNRTVTGSDGDSRPDATLHPEFTLARW 70

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
               LS E      +Y + E C MC+AA +   + R+ Y +S
Sbjct: 71  AQLNLSAEERKNSTVYTSGEHCAMCSAAHAWCGLGRIVYVSS 112


>gi|255528573|ref|ZP_05395347.1| riboflavin biosynthesis protein RibD [Clostridium carboxidivorans
           P7]
 gi|296188130|ref|ZP_06856522.1| riboflavin biosynthesis protein RibD [Clostridium carboxidivorans
           P7]
 gi|255507738|gb|EET84204.1| riboflavin biosynthesis protein RibD [Clostridium carboxidivorans
           P7]
 gi|296047256|gb|EFG86698.1| riboflavin biosynthesis protein RibD [Clostridium carboxidivorans
           P7]
          Length = 370

 Score = 35.8 bits (81), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 32/127 (25%), Positives = 58/127 (45%), Gaps = 19/127 (14%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85
           VGAV V N  I+ +  ++         HAE+ A++      + E     +LYV+LEPC+ 
Sbjct: 33  VGAVIVNNGNIVGQGYHKFYG----GPHAEVYALKE-----AGESAKGGELYVSLEPCSH 83

Query: 86  ------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139
                 CA A+  A I+++     +P      NG +        +  E+  G+ E+ +++
Sbjct: 84  YGKTPPCAEAVLKAGIKKVVIAMKDPNSLVAGNGIKLLE----KNGVEVIVGVLEEEAKK 139

Query: 140 IIQDFFK 146
           + + F K
Sbjct: 140 VNEIFIK 146


>gi|114777284|ref|ZP_01452295.1| cytidine and deoxycytidylate deaminase family protein
           [Mariprofundus ferrooxydans PV-1]
 gi|114552429|gb|EAU54912.1| cytidine and deoxycytidylate deaminase family protein
           [Mariprofundus ferrooxydans PV-1]
          Length = 195

 Score = 35.8 bits (81), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 22/57 (38%), Positives = 30/57 (52%), Gaps = 4/57 (7%)

Query: 52  AHAEILAIRMGCRILSQEIL----PEVDLYVTLEPCTMCAAAISLARIRRLYYGASN 104
           AHAE++AI    + L    L       +L  + EPC MC  AI  + IR+L  GAS+
Sbjct: 80  AHAEMVAISSAQQKLGSFDLGSGTARYELVTSCEPCAMCFGAIPWSGIRQLVCGASD 136


>gi|27904888|ref|NP_778014.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Buchnera
           aphidicola str. Bp (Baizongia pistaciae)]
 gi|46396884|sp|Q89AB0|RIBD_BUCBP RecName: Full=Riboflavin biosynthesis protein RibD; Includes:
           RecName:
           Full=Diaminohydroxyphosphoribosylaminopyrimidine
           deaminase; Short=DRAP deaminase; AltName:
           Full=Riboflavin-specific deaminase; Includes: RecName:
           Full=5-amino-6-(5-phosphoribosylamino)uracil reductase;
           AltName: Full=HTP reductase
 gi|27904286|gb|AAO27119.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Buchnera
           aphidicola str. Bp (Baizongia pistaciae)]
          Length = 372

 Score = 35.8 bits (81), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 41/151 (27%), Positives = 65/151 (43%), Gaps = 27/151 (17%)

Query: 7   FMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
           +M  A++ A+  +L    P   VG + V NN I+    ++   +K    HAEI A++   
Sbjct: 6   YMKKAIKLAKKGSLTTS-PNPNVGCIIVNNNIIVGSGWHKKTGMK----HAEIYALKT-- 58

Query: 64  RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGA--SNPKGGGIENGTQ 115
              S E       Y+TLEPC+       C  A++   I R+       NPK  G  NG +
Sbjct: 59  ---SGEKAKGATAYITLEPCSHFGKTPPCCVALTKYGISRVVIATLDPNPKVSG--NGVK 113

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
           +       H   +  G   + S +I + FF+
Sbjct: 114 WLK----KHGILVTIGTLSKESIKINKGFFQ 140


>gi|194016088|ref|ZP_03054703.1| riboflavin biosynthesis protein RibD [Bacillus pumilus ATCC 7061]
 gi|194012443|gb|EDW22010.1| riboflavin biosynthesis protein RibD [Bacillus pumilus ATCC 7061]
          Length = 361

 Score = 35.8 bits (81), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 33/115 (28%), Positives = 51/115 (44%), Gaps = 21/115 (18%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP----VGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56
           MK    +M  A+  A+  A++ +      VGAV V   +I+    +    +K    HAEI
Sbjct: 1   MKDDVFYMKLAIANAK--AMKGQTSPNPLVGAVIVQQGEIVGMGAH----MKAGEPHAEI 54

Query: 57  LAIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP 105
            A+ M     + E      LYVTLEPC+       C  AI  + ++R+     +P
Sbjct: 55  HALHM-----AGEKAEGAHLYVTLEPCSHHGKTGPCTEAIIKSGVKRVVIATQDP 104


>gi|226294624|gb|EEH50044.1| predicted protein [Paracoccidioides brasiliensis Pb18]
          Length = 264

 Score = 35.8 bits (81), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 22/79 (27%), Positives = 39/79 (49%), Gaps = 4/79 (5%)

Query: 29  VAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG-CRILSQEIL---PEVDLYVTLEPCT 84
           ++VL + +I     R  E+  +T   ++L  + G  ++   + L    E+ LY   E C+
Sbjct: 111 LSVLGSTLIQLPFQRTGEIAAITNCTKVLTDKSGRFKMTPSQTLNAFKELTLYSNAESCS 170

Query: 85  MCAAAISLARIRRLYYGAS 103
           MC +AI  A  +   YG+S
Sbjct: 171 MCTSAIRWAGFKEYVYGSS 189


>gi|121533690|ref|ZP_01665517.1| riboflavin biosynthesis protein RibD [Thermosinus carboxydivorans
           Nor1]
 gi|121307681|gb|EAX48596.1| riboflavin biosynthesis protein RibD [Thermosinus carboxydivorans
           Nor1]
          Length = 379

 Score = 35.8 bits (81), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 28/86 (32%), Positives = 40/86 (46%), Gaps = 15/86 (17%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85
           VGAV V +  I+    +     +  T HAEI AI       + ++  +  LYVTLEPC+ 
Sbjct: 27  VGAVIVKDGTIVGEGWHH----RAGTPHAEIHAINQ-----AGDLAKDATLYVTLEPCSH 77

Query: 86  ------CAAAISLARIRRLYYGASNP 105
                 C  AI  A I R+    ++P
Sbjct: 78  YGRTGPCVQAIVQAGITRVVAAMTDP 103


>gi|91225503|ref|ZP_01260625.1| putative riboflavin deaminase [Vibrio alginolyticus 12G01]
 gi|269968858|ref|ZP_06182841.1| putative riboflavin deaminase [Vibrio alginolyticus 40B]
 gi|91189866|gb|EAS76139.1| putative riboflavin deaminase [Vibrio alginolyticus 12G01]
 gi|269826538|gb|EEZ80889.1| putative riboflavin deaminase [Vibrio alginolyticus 40B]
          Length = 141

 Score = 35.8 bits (81), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 39/123 (31%), Positives = 53/123 (43%), Gaps = 33/123 (26%)

Query: 7   FMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRA------GNRNRELKDVTAHAEILA 58
           FM  ALE ++NA    +   PVG V V +N+I+S        GN          HAE+ A
Sbjct: 5   FMRRALEVSKNALPECQPNPPVGCVLVKDNQIVSEGHTQAIGGN----------HAEVEA 54

Query: 59  IRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP----KGG 108
           +        Q  L  V  YVTLEPC+       CA  +  + I ++     +P     G 
Sbjct: 55  LNA-----YQGSLESVTAYVTLEPCSFVGRTPACAVTLVKSGISKVVVAILDPDPRNSGR 109

Query: 109 GIE 111
           GIE
Sbjct: 110 GIE 112


>gi|317122797|ref|YP_004102800.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase;
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Thermaerobacter marianensis DSM 12885]
 gi|315592777|gb|ADU52073.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase;
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Thermaerobacter marianensis DSM 12885]
          Length = 427

 Score = 35.4 bits (80), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 37/109 (33%), Positives = 49/109 (44%), Gaps = 19/109 (17%)

Query: 7   FMSCALEEAQNAALR---NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
           FM  AL  A  A  R   N + VGAV V + +++    +R    +    HAEI A+RM  
Sbjct: 38  FMRRALRLASRARGRTHPNPM-VGAVIVRDGEVVGEGFHR----RAGEPHAEIEALRM-- 90

Query: 64  RILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPK 106
              + E      LYVTLEPC        C  AI  A +RR+     +P 
Sbjct: 91  ---AGERARGATLYVTLEPCCHYGRTPPCTGAIISAGLRRVVVAMVDPD 136


>gi|261213199|ref|ZP_05927482.1| putative deoxycytidylate deaminase [Vibrio sp. RC341]
 gi|260837617|gb|EEX64311.1| putative deoxycytidylate deaminase [Vibrio sp. RC341]
          Length = 243

 Score = 35.4 bits (80), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 26/80 (32%), Positives = 37/80 (46%), Gaps = 7/80 (8%)

Query: 47  LKDVT-----AHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
           +KD+T      HAE+ AI    R  S     + DLY T  PC  CA  I  + I+R+ Y 
Sbjct: 83  IKDITEYGRVVHAEMEAILACAR--SDISTKDADLYCTTFPCHNCAKHIVASGIKRVVYV 140

Query: 102 ASNPKGGGIENGTQFYTLAT 121
              PK   ++  +   TL +
Sbjct: 141 EPYPKSKALDFHSDSITLES 160


>gi|300871035|ref|YP_003785907.1| riboflavin biosynthesis protein RibD [Brachyspira pilosicoli
           95/1000]
 gi|300688735|gb|ADK31406.1| riboflavin biosynthesis protein, RibD [Brachyspira pilosicoli
           95/1000]
          Length = 365

 Score = 35.4 bits (80), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 38/117 (32%), Positives = 58/117 (49%), Gaps = 18/117 (15%)

Query: 7   FMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           +M  A+EEA+      +  P VGAV V ++++I    ++    K    HAEI A      
Sbjct: 5   YMRMAIEEAKKGEGFTSPNPLVGAVIVKDDRVIGIGYHK----KYGENHAEINAFLNAKE 60

Query: 65  ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYG--ASNPK--GGGIE 111
             + E +    +YVTLEPC+       CA AI   +++++  G   SNPK  G GI+
Sbjct: 61  --NGEDVEGASIYVTLEPCSHYGKTPPCADAIIKNKLKKVIIGCVDSNPKVAGNGIK 115


>gi|119356772|ref|YP_911416.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase /
           diaminohydroxyphosphoribosylaminopyrimidine deaminase
           [Chlorobium phaeobacteroides DSM 266]
 gi|119354121|gb|ABL64992.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase /
           diaminohydroxyphosphoribosylaminopyrimidine deaminase
           [Chlorobium phaeobacteroides DSM 266]
          Length = 366

 Score = 35.4 bits (80), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 33/99 (33%), Positives = 45/99 (45%), Gaps = 17/99 (17%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85
           VG+V V N +I+    +     +    HAE+ AI     + + E+L    LYV LEPC+ 
Sbjct: 30  VGSVIVHNGEIVGEGYHE----RFGGPHAEVHAI---ASVGNAEVLQNSTLYVNLEPCSH 82

Query: 86  ------CAAAISLARIRRLYYGASNPK----GGGIENGT 114
                 CA  I   RI R+  G  +P     G GIE  T
Sbjct: 83  FGKTPPCADLILAKRIPRVVIGCRDPHEKVAGKGIERLT 121


>gi|282877095|ref|ZP_06285937.1| riboflavin biosynthesis protein RibD [Prevotella buccalis ATCC
           35310]
 gi|281300777|gb|EFA93104.1| riboflavin biosynthesis protein RibD [Prevotella buccalis ATCC
           35310]
          Length = 326

 Score = 35.4 bits (80), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 32/103 (31%), Positives = 45/103 (43%), Gaps = 12/103 (11%)

Query: 10  CALEEAQNAALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQ 68
           C     Q  AL    P VGAV V   +I+         ++   AHAE+ A     R   +
Sbjct: 14  CLQLAKQGRALAKPNPMVGAVIVYQGRILGEG----YHVRCGQAHAEVNAF-ASVRPADE 68

Query: 69  EILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP 105
            +LP+  LYV+LEPC        CA  I    ++R+  G  +P
Sbjct: 69  PLLPQSTLYVSLEPCCHTGKTPPCADLIIRKHVKRVVCGCIDP 111


>gi|257126309|ref|YP_003164423.1| riboflavin biosynthesis protein RibD [Leptotrichia buccalis
           C-1013-b]
 gi|257050248|gb|ACV39432.1| riboflavin biosynthesis protein RibD [Leptotrichia buccalis
           C-1013-b]
          Length = 371

 Score = 35.4 bits (80), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 33/107 (30%), Positives = 50/107 (46%), Gaps = 14/107 (13%)

Query: 7   FMSCALEEAQNAA-LRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           +M  A+E A+  A   N  P VGAV V   K+I    ++         HAE+ A+    +
Sbjct: 9   YMRMAIELAKKGARAVNPNPMVGAVVVQAGKVIGTGYHKYFG----GPHAEVYALDEASK 64

Query: 65  ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP 105
             + + L    +YVTLEPC+       CA  I    ++R   G+S+P
Sbjct: 65  --NSKDLSNATIYVTLEPCSHYGKTPPCAEKIVKLGLKRCVIGSSDP 109


>gi|291449353|ref|ZP_06588743.1| conserved hypothetical protein [Streptomyces roseosporus NRRL
           15998]
 gi|291352300|gb|EFE79204.1| conserved hypothetical protein [Streptomyces roseosporus NRRL
           15998]
          Length = 316

 Score = 35.4 bits (80), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 30/95 (31%), Positives = 37/95 (38%), Gaps = 13/95 (13%)

Query: 43  RNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL---- 98
           RN   +DV+    + A R G R+   + +P   L     P     A  SLA  RR+    
Sbjct: 65  RNAAGQDVSIERAVAAARSGTRLYGPDPVPVAALDTDRTPHIEVTAESSLAAARRMTGEA 124

Query: 99  --------YYGASNPKGGGIENGTQFYTLATCHHS 125
                   Y  A NP GGG  NG Q    A C  S
Sbjct: 125 PGRVAVLNYASARNP-GGGYLNGAQAQEEALCRGS 158


>gi|157376789|ref|YP_001475389.1| CMP/dCMP deaminase, zinc-binding [Shewanella sediminis HAW-EB3]
 gi|157319163|gb|ABV38261.1| CMP/dCMP deaminase, zinc-binding [Shewanella sediminis HAW-EB3]
          Length = 145

 Score = 35.4 bits (80), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 31/87 (35%), Positives = 41/87 (47%), Gaps = 18/87 (20%)

Query: 26  VGAVAVLNNKIIS------------RAGNRNRELKDV-TAHAEILAIRMGCRILSQEILP 72
           VGAV   NN+I+S             A   NRE+K + T HAE  AI    R LS     
Sbjct: 27  VGAVITENNRIVSLGFNGYPHGISDSAETDNREMKLLKTLHAEENAILHAKRDLS----- 81

Query: 73  EVDLYVTLEPCTMCAAAISLARIRRLY 99
             +++VT  PC  CAA I    +R ++
Sbjct: 82  SCEIWVTHFPCPNCAAKIIQTGLRAVH 108


>gi|189345709|ref|YP_001942238.1| CMP/dCMP deaminase, zinc-binding [Chlorobium limicola DSM 245]
 gi|189339856|gb|ACD89259.1| CMP/dCMP deaminase, zinc-binding [Chlorobium limicola DSM 245]
          Length = 112

 Score = 35.4 bits (80), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 2/54 (3%)

Query: 71  LPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS--NPKGGGIENGTQFYTLATC 122
           LP+++L  + EPC MC  AI  + IR++  GA+  + +  G + G +      C
Sbjct: 21  LPDLELVTSTEPCAMCFGAIIWSGIRKVISGATSRDAEAAGFDEGPKPDNWIAC 74


>gi|333029739|ref|ZP_08457800.1| riboflavin biosynthesis protein RibD [Bacteroides coprosuis DSM
           18011]
 gi|332740336|gb|EGJ70818.1| riboflavin biosynthesis protein RibD [Bacteroides coprosuis DSM
           18011]
          Length = 348

 Score = 35.4 bits (80), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 27/86 (31%), Positives = 40/86 (46%), Gaps = 13/86 (15%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85
           VGAV V    II    +    ++   AHAE+ AI     +  Q +LPE  ++V+LEPC+ 
Sbjct: 27  VGAVIVHKGIIIGEGFH----IQSGKAHAEVNAIN---SVKDQSLLPESTIFVSLEPCSH 79

Query: 86  ------CAAAISLARIRRLYYGASNP 105
                 C   I   +I  +  G  +P
Sbjct: 80  TGKTPPCVDLIINKKIPHVVIGCQDP 105


>gi|269114924|ref|YP_003302687.1| Deoxycytidylate deaminase [Mycoplasma hominis]
 gi|268322549|emb|CAX37284.1| Deoxycytidylate deaminase [Mycoplasma hominis ATCC 23114]
          Length = 158

 Score = 35.4 bits (80), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 1/51 (1%)

Query: 53  HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
           HAE  AI +   I + +I+P   LYVT  PC  CA  I  ++I ++ Y  +
Sbjct: 73  HAEANAI-INANITNSKIIPGSILYVTHSPCYHCAKLIVQSKISKVVYAVA 122


>gi|116617932|ref|YP_818303.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase /
           diaminohydroxyphosphoribosylaminopyrimidine deaminase
           [Leuconostoc mesenteroides subsp. mesenteroides ATCC
           8293]
 gi|116096779|gb|ABJ61930.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase /
           diaminohydroxyphosphoribosylaminopyrimidine deaminase
           [Leuconostoc mesenteroides subsp. mesenteroides ATCC
           8293]
          Length = 344

 Score = 35.4 bits (80), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 31/96 (32%), Positives = 46/96 (47%), Gaps = 17/96 (17%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85
           VGAV V + ++I+   +     K   AHAEI A     R+ ++       LYVTLEPC+ 
Sbjct: 28  VGAVIVKDGQVITTGYHE----KFGEAHAEINAFN---RVKNKTEFLGATLYVTLEPCST 80

Query: 86  ------CAAAISLARIRRLYYGASNP----KGGGIE 111
                 CA  I    ++R+  G+ +P     G GI+
Sbjct: 81  QGKVGSCAVQIQNWGLKRVVVGSIDPNPSTNGKGIK 116


>gi|308516912|emb|CBW47017.1| hypothetical protein [Roseovarius sp. 217 phage 1]
          Length = 143

 Score = 35.4 bits (80), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 31/110 (28%), Positives = 50/110 (45%), Gaps = 13/110 (11%)

Query: 7   FMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGN----RNRELKDVTA------H 53
           F   AL  AQ  +LR+  P   VGAV +  +K I+  G     R  + KD+        +
Sbjct: 5   FTEWALGLAQAVSLRSRDPSTKVGAVIIRPDKTIASMGYNGFPRTMQDKDIWWNDRTEKY 64

Query: 54  AEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
           A ++   M   + ++E +  + LY T   C  CA  +  A IR +++  S
Sbjct: 65  ARVIHAEMNALLNAKESVNGMQLYCTHPCCEHCAKHVIAAGIRHVHFYTS 114


>gi|170760325|ref|YP_001788192.1| riboflavin biosynthesis protein RibD [Clostridium botulinum A3 str.
           Loch Maree]
 gi|169407314|gb|ACA55725.1| riboflavin biosynthesis protein RibD [Clostridium botulinum A3 str.
           Loch Maree]
          Length = 365

 Score = 35.4 bits (80), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 44/158 (27%), Positives = 69/158 (43%), Gaps = 29/158 (18%)

Query: 1   MKKGNVFMSCALEEAQNAALR-NEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           M+  N +M  AL+ A+    + N  P VGA+ V NNKII    ++         HAE+ A
Sbjct: 1   MEDYNFYMEKALKLAERGEGKVNPNPKVGAIVVKNNKIIGEGYHKYFG----GPHAEVYA 56

Query: 59  IRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP----KGG 108
           +R      + E      +Y+TLEPC+       CA  I    I +      +P    +G 
Sbjct: 57  LRE-----ASEKAKGATMYITLEPCSHYGKTPPCAEYIVKMGISKAIIAMKDPNPLVEGR 111

Query: 109 GIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
           GI+   Q        +  E+   I E+ S+++ + F K
Sbjct: 112 GIDILKQ--------NGIEVVTEIMEKESKKLNEVFIK 141


>gi|114564723|ref|YP_752237.1| CMP/dCMP deaminase, zinc-binding [Shewanella frigidimarina NCIMB
           400]
 gi|114336016|gb|ABI73398.1| CMP/dCMP deaminase, zinc-binding [Shewanella frigidimarina NCIMB
           400]
          Length = 144

 Score = 35.4 bits (80), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 32/92 (34%), Positives = 42/92 (45%), Gaps = 18/92 (19%)

Query: 26  VGAVAVLNNKIISRAGN------------RNRELKDV-TAHAEILAIRMGCRILSQEILP 72
           VGAV   NN+I+S   N             NRE+K + T HAE  AI    R LS     
Sbjct: 27  VGAVITENNRIVSLGFNGYPHGISDSAETDNREMKLLKTLHAEENAILHAKRDLSS---- 82

Query: 73  EVDLYVTLEPCTMCAAAISLARIRRLYYGASN 104
             +++VT  PC  CAA I    +R ++    N
Sbjct: 83  -CEIWVTHFPCPNCAAKIIQTGLRAVHSPKPN 113


>gi|317485112|ref|ZP_07943994.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Bilophila wadsworthia 3_1_6]
 gi|316923647|gb|EFV44851.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Bilophila wadsworthia 3_1_6]
          Length = 194

 Score = 35.4 bits (80), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 26/89 (29%), Positives = 39/89 (43%), Gaps = 2/89 (2%)

Query: 16  QNAALRNEIPVGAV-AVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEV 74
           ++ A  NE P G V A  + +++    N      D  AH E+   R   +    E L + 
Sbjct: 39  KSLAYGNE-PYGCVLAGPSGELLLEGLNTCLTEHDPLAHGEMNLCREAAQKYDPEFLWQC 97

Query: 75  DLYVTLEPCTMCAAAISLARIRRLYYGAS 103
            +YV   PC+MC  AI    I R+ +  S
Sbjct: 98  SIYVPGSPCSMCTCAIFYTNIGRIVHATS 126


>gi|307543864|ref|YP_003896343.1| hypothetical protein HELO_1275 [Halomonas elongata DSM 2581]
 gi|307215888|emb|CBV41158.1| hypothetical protein HELO_1275 [Halomonas elongata DSM 2581]
          Length = 157

 Score = 35.4 bits (80), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 26/82 (31%), Positives = 38/82 (46%), Gaps = 4/82 (4%)

Query: 25  PVGAVAV-LNNKIISRAGNRNR-ELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEP 82
           P G+V V  + K+++   +RNR    D T H E    R     L  E      +Y + E 
Sbjct: 27  PFGSVLVGADGKVLAE--DRNRIAGGDSTRHPEFALARWAAENLPAESRAAATVYTSGEH 84

Query: 83  CTMCAAAISLARIRRLYYGASN 104
           C MCAAA +   + R+ Y +S 
Sbjct: 85  CPMCAAAHAWVGLGRIVYASST 106


>gi|255655719|ref|ZP_05401128.1| riboflavin biosynthesis protein [Clostridium difficile QCD-23m63]
 gi|296451726|ref|ZP_06893457.1| riboflavin biosynthesis protein RibD [Clostridium difficile NAP08]
 gi|296878970|ref|ZP_06902968.1| riboflavin biosynthesis protein RibD [Clostridium difficile NAP07]
 gi|296259427|gb|EFH06291.1| riboflavin biosynthesis protein RibD [Clostridium difficile NAP08]
 gi|296429997|gb|EFH15846.1| riboflavin biosynthesis protein RibD [Clostridium difficile NAP07]
          Length = 370

 Score = 35.4 bits (80), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 39/147 (26%), Positives = 66/147 (44%), Gaps = 21/147 (14%)

Query: 7   FMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           +M  A+E A+N     N  P VG V V ++ II +  +     K  + HAE+ AI     
Sbjct: 13  YMKKAIELAKNGEGFVNPNPLVGCVIVKDDYIIGKGYHE----KFGSNHAEVNAINS--- 65

Query: 65  ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
             +++ L +  LYV LEPC+       C   I   +I+R+     +P      NG +   
Sbjct: 66  --AKQSLKDSTLYVNLEPCSHYGKTPPCVDKIIQNKIKRVVISTLDPNPLVCGNGVK--- 120

Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFF 145
                ++ ++  G  E+ +R + + FF
Sbjct: 121 -KLRDNNIDVTVGTLEEEARDLNEVFF 146


>gi|257067270|ref|YP_003153525.1| cytosine/adenosine deaminase [Brachybacterium faecium DSM 4810]
 gi|256558088|gb|ACU83935.1| cytosine/adenosine deaminase [Brachybacterium faecium DSM 4810]
          Length = 163

 Score = 35.4 bits (80), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 2/81 (2%)

Query: 25  PVGAVAVLNNKIISRAGNRNR-ELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83
           P G++ +++     R  +RNR +  D T H E    R     LS +      +Y + E C
Sbjct: 32  PFGSL-LVDADGTERFADRNRVQGGDHTRHPEFEIARWAANHLSPQERARATVYTSGEHC 90

Query: 84  TMCAAAISLARIRRLYYGASN 104
            MCAAA +   + R+ Y +S 
Sbjct: 91  PMCAAAHAWVGLGRIVYASST 111


>gi|156742645|ref|YP_001432774.1| CMP/dCMP deaminase [Roseiflexus castenholzii DSM 13941]
 gi|156233973|gb|ABU58756.1| CMP/dCMP deaminase zinc-binding [Roseiflexus castenholzii DSM
           13941]
          Length = 190

 Score = 35.4 bits (80), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 26/91 (28%), Positives = 41/91 (45%), Gaps = 8/91 (8%)

Query: 33  NNKIISRAGNRNRELKDVTAHAEILAI-----RMGCRILSQEILPEVDLYVTLEPCTMCA 87
           +  ++S   N    L +   HAE++A+     R+G   L +      DL  + EPC MC 
Sbjct: 61  DGVLVSAGVNSVTRLTNAVLHAEVVALMFAQARVGAYTL-RAANTSYDLVTSCEPCAMCL 119

Query: 88  AAISLARIRRLYYGASNPKGG--GIENGTQF 116
            AI  + ++RL  GA+       G + G  F
Sbjct: 120 GAILWSGVQRLVCGATRDDAERIGFDEGPVF 150


>gi|269958267|ref|YP_003328054.1| riboflavin biosynthesis protein [Anaplasma centrale str. Israel]
 gi|269848096|gb|ACZ48740.1| riboflavin biosynthesis protein [Anaplasma centrale str. Israel]
          Length = 365

 Score = 35.4 bits (80), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 43/149 (28%), Positives = 63/149 (42%), Gaps = 18/149 (12%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVA-VLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           FMS AL  A+   L N  P   V  V+ N   S  G R         HAE++A+R     
Sbjct: 7   FMSIALRLARRG-LGNTYPNPTVGCVITNGAGSIVG-RGWTAMGGRPHAEVVALRH---- 60

Query: 66  LSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
            + E       YVTLEPC        C AA+  A +RR+   A +P       G +  + 
Sbjct: 61  -AGEAAAGSTAYVTLEPCCHRGQTGPCTAALINAGVRRVVIAALDPDERVSGKGAKSLSE 119

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKER 148
           A      E+  G+ +Q++ ++   FF  +
Sbjct: 120 A----GVEVKLGVLQQQAEELNAGFFYSK 144


>gi|149187995|ref|ZP_01866290.1| pyrimidine reductase [Vibrio shilonii AK1]
 gi|148837983|gb|EDL54925.1| pyrimidine reductase [Vibrio shilonii AK1]
          Length = 369

 Score = 35.4 bits (80), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 35/128 (27%), Positives = 53/128 (41%), Gaps = 19/128 (14%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85
           VG V  LNN+++    ++    K    HAE+ A+RM       E       YVTLEPC+ 
Sbjct: 32  VGCVITLNNEVVGEGYHK----KAGEPHAEVHALRMAA-----ERAKGATAYVTLEPCSH 82

Query: 86  ------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139
                 CA  +  A + ++    S+P       G      A      E+  G+ EQ +R 
Sbjct: 83  YGRTPPCAEGLIKAGVSKVICAMSDPNPQVAGRGFNMLREAGI----EVSVGLLEQDARA 138

Query: 140 IIQDFFKE 147
           +   F K+
Sbjct: 139 LNPGFLKK 146


>gi|315657966|ref|ZP_07910840.1| riboflavin biosynthesis protein RibD [Staphylococcus lugdunensis
           M23590]
 gi|315497002|gb|EFU85323.1| riboflavin biosynthesis protein RibD [Staphylococcus lugdunensis
           M23590]
          Length = 383

 Score = 35.4 bits (80), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 27/84 (32%), Positives = 44/84 (52%), Gaps = 11/84 (13%)

Query: 3   KGNVFMSCALEEAQNAALRNEI--PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           K ++++S A++ A+    +  +  PVGAV V N +II    +    LK    HAE+ AI 
Sbjct: 36  KLDLYLSKAIQLAKMVKGQTGVNPPVGAVVVKNGRIIGLGAH----LKQGEKHAEVQAID 91

Query: 61  MGCRILSQEILPEVDLYVTLEPCT 84
           M     + +      +YV+L+PCT
Sbjct: 92  M-----AGDEAQGATIYVSLQPCT 110


>gi|313200621|ref|YP_004039279.1| riboflavin biosynthesis protein ribd [Methylovorus sp. MP688]
 gi|312439937|gb|ADQ84043.1| riboflavin biosynthesis protein RibD [Methylovorus sp. MP688]
          Length = 368

 Score = 35.4 bits (80), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 26/86 (30%), Positives = 41/86 (47%), Gaps = 15/86 (17%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85
           VG V V + +I+    +    LK    HAE+ A+R      + ++    D YVTLEPC+ 
Sbjct: 30  VGCVIVKDGQIVGEGAH----LKAGEPHAEVHALRQ-----AGDLAQGADAYVTLEPCSH 80

Query: 86  ------CAAAISLARIRRLYYGASNP 105
                 CA A+  A ++R+     +P
Sbjct: 81  HGRTPPCADALIKAGVKRVVAAMQDP 106


>gi|222151486|ref|YP_002560642.1| late competence operon required for DNA binding and uptake ComEB
           [Macrococcus caseolyticus JCSC5402]
 gi|222120611|dbj|BAH17946.1| late competence operon required for DNA binding and uptake ComEB
           [Macrococcus caseolyticus JCSC5402]
          Length = 153

 Score = 35.4 bits (80), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 30/112 (26%), Positives = 47/112 (41%), Gaps = 30/112 (26%)

Query: 12  LEEAQNAALRN---EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQ 68
           + ++Q  ALR+    + VGA  V NN+II  AG  N  +       E+  I  GC +   
Sbjct: 11  MAQSQLLALRSTCTRLSVGATIVKNNRII--AGGYNGSVS-----GEVHCIDAGCYVEGG 63

Query: 69  EILPEV--------------------DLYVTLEPCTMCAAAISLARIRRLYY 100
             +  +                    D+YVT  PC  C  ++  A I+++YY
Sbjct: 64  HCIRTIHAEMNALLQCAKMGVTTEGADIYVTHFPCIHCTKSLIQAGIKKIYY 115


>gi|59714100|ref|YP_206875.1| deoxycytidylate deaminase [Vibrio fischeri ES114]
 gi|197337866|ref|YP_002158583.1| RibG [Vibrio fischeri MJ11]
 gi|59482348|gb|AAW87987.1| deoxycytidylate deaminase [Vibrio fischeri ES114]
 gi|197315118|gb|ACH64567.1| RibG [Vibrio fischeri MJ11]
          Length = 147

 Score = 35.4 bits (80), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 41/87 (47%), Gaps = 18/87 (20%)

Query: 26  VGAVAVLNNKIIS------------RAGNRNRELKDV-TAHAEILAIRMGCRILSQEILP 72
           VGAV   +N+I+S             A    RE+K + T HAE  AI     + ++  L 
Sbjct: 27  VGAVITKHNRIVSVGFNGYPHGVSDSADTDEREIKYLKTLHAEENAI-----LFAKRDLE 81

Query: 73  EVDLYVTLEPCTMCAAAISLARIRRLY 99
             D++VT  PC  CAA I    I ++Y
Sbjct: 82  GCDIWVTHFPCPNCAAKIIQTGISKVY 108


>gi|289550476|ref|YP_003471380.1| Diaminohydroxyphosphoribosylaminopyrimidine
          deaminase/5-amino-6-(5-phosphoribosylamino)uracil
          reductase [Staphylococcus lugdunensis HKU09-01]
 gi|289180008|gb|ADC87253.1| Diaminohydroxyphosphoribosylaminopyrimidine
          deaminase/5-amino-6-(5-phosphoribosylamino)uracil
          reductase [Staphylococcus lugdunensis HKU09-01]
          Length = 368

 Score = 35.4 bits (80), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 27/84 (32%), Positives = 43/84 (51%), Gaps = 11/84 (13%)

Query: 3  KGNVFMSCALEEAQNAALRNEI--PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
          K ++++S A++ A+    +  +  PVGAV V N +II    +    LK    HAE+ AI 
Sbjct: 21 KLDLYLSKAIQLAKMVKGQTGVNPPVGAVVVKNGRIIGLGAH----LKQGEKHAEVQAID 76

Query: 61 MGCRILSQEILPEVDLYVTLEPCT 84
          M       +      +YV+L+PCT
Sbjct: 77 MAG-----DEAQGATIYVSLQPCT 95


>gi|332982092|ref|YP_004463533.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase;
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Mahella australiensis 50-1 BON]
 gi|332699770|gb|AEE96711.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase;
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Mahella australiensis 50-1 BON]
          Length = 363

 Score = 35.4 bits (80), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 47/156 (30%), Positives = 67/156 (42%), Gaps = 35/156 (22%)

Query: 6   VFMSCALEEAQ-NAALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM-- 61
           +FM  ALE A+      N  P VGAV V   +II    ++    K    HAEI A+R   
Sbjct: 5   IFMQRALELARMGWGTTNPNPMVGAVIVKGGRIIGEGYHK----KAGEPHAEINALREAG 60

Query: 62  -GCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPK----GGGI 110
            G R  +        +YVTLEPC+       CA A+  A ++ +     +P     G GI
Sbjct: 61  EGARGST--------VYVTLEPCSHFGRTPPCADALVKAGVKEVVIAMEDPNPRVAGRGI 112

Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
                    A      ++  GI EQ +R++ + F K
Sbjct: 113 N--------ALRQAGIKVITGIMEQEARRLNEVFIK 140


>gi|124513702|ref|XP_001350207.1| cytidine and deoxycytidylate deaminase, putative [Plasmodium
           falciparum 3D7]
 gi|23615624|emb|CAD52616.1| cytidine and deoxycytidylate deaminase, putative [Plasmodium
           falciparum 3D7]
          Length = 232

 Score = 35.4 bits (80), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 14/32 (43%), Positives = 19/32 (59%)

Query: 78  VTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109
           VT EPC MC  A+ L  I+ +Y+   N + GG
Sbjct: 148 VTCEPCIMCVYALKLIGIKNIYFCCLNERFGG 179


>gi|153836433|ref|ZP_01989100.1| diaminohydroxyphosphoribosylamino-pyrimidine deaminase [Vibrio
           parahaemolyticus AQ3810]
 gi|260901767|ref|ZP_05910162.1| riboflavin biosynthesis protein RibD [Vibrio parahaemolyticus
           AQ4037]
 gi|149750335|gb|EDM61080.1| diaminohydroxyphosphoribosylamino-pyrimidine deaminase [Vibrio
           parahaemolyticus AQ3810]
 gi|308108841|gb|EFO46381.1| riboflavin biosynthesis protein RibD [Vibrio parahaemolyticus
           AQ4037]
          Length = 141

 Score = 35.4 bits (80), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 39/123 (31%), Positives = 53/123 (43%), Gaps = 33/123 (26%)

Query: 7   FMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRA------GNRNRELKDVTAHAEILA 58
           FM  ALE ++NA    +   PVG V V +N+I+S        GN          HAE+ A
Sbjct: 5   FMRRALEVSKNALPECQPNPPVGCVLVKDNQIVSEGHTQAIGGN----------HAEVEA 54

Query: 59  IRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP----KGG 108
           +        Q  L  V  YVTLEPC+       CA  +  + I ++     +P     G 
Sbjct: 55  LNA-----YQGSLESVTAYVTLEPCSFVGRTPACAVTLVKSGIGKVVVAMLDPDPRNSGR 109

Query: 109 GIE 111
           GIE
Sbjct: 110 GIE 112


>gi|117923484|ref|YP_864101.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Magnetococcus sp. MC-1]
 gi|117607240|gb|ABK42695.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Magnetococcus sp. MC-1]
          Length = 376

 Score = 35.4 bits (80), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 35/111 (31%), Positives = 46/111 (41%), Gaps = 17/111 (15%)

Query: 3   KGNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           K   +M  AL  A       R    VG V V  ++II R  +R    K    HAE+ A+R
Sbjct: 8   KDRAYMDHALRLAARGLGRTRPNPTVGCVIVKEDRIIGRGWHR----KAGGPHAEVEALR 63

Query: 61  MGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP 105
           M     + E       YVTLEPC+       C   +  A IRR+     +P
Sbjct: 64  M-----AGEAARGATAYVTLEPCSHHGRTPPCCEGLIKAGIRRVVAAMEDP 109


>gi|229524866|ref|ZP_04414271.1| deoxycytidylate deaminase-related protein [Vibrio cholerae bv.
           albensis VL426]
 gi|229338447|gb|EEO03464.1| deoxycytidylate deaminase-related protein [Vibrio cholerae bv.
           albensis VL426]
          Length = 506

 Score = 35.4 bits (80), Expect = 2.9,   Method: Composition-based stats.
 Identities = 26/80 (32%), Positives = 37/80 (46%), Gaps = 7/80 (8%)

Query: 47  LKDVT-----AHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
           +KD+T      HAE+ AI    R  S     + DLY T  PC  CA  I  + I+R+ Y 
Sbjct: 346 IKDITEYGRVVHAEMEAILACAR--SDISTKDADLYCTTFPCHNCAKHIVASGIKRVVYV 403

Query: 102 ASNPKGGGIENGTQFYTLAT 121
              PK   ++  +   TL +
Sbjct: 404 EPYPKSKALDFHSDSITLES 423


>gi|28900546|ref|NP_800201.1| putative riboflavin deaminase [Vibrio parahaemolyticus RIMD
           2210633]
 gi|260365428|ref|ZP_05777965.1| riboflavin biosynthesis protein RibD [Vibrio parahaemolyticus
           K5030]
 gi|260877493|ref|ZP_05889848.1| riboflavin biosynthesis protein RibD [Vibrio parahaemolyticus
           AN-5034]
 gi|260894835|ref|ZP_05903331.1| riboflavin biosynthesis protein RibD [Vibrio parahaemolyticus
           Peru-466]
 gi|28808926|dbj|BAC62034.1| putative riboflavin deaminase [Vibrio parahaemolyticus RIMD
           2210633]
 gi|308085328|gb|EFO35023.1| riboflavin biosynthesis protein RibD [Vibrio parahaemolyticus
           Peru-466]
 gi|308090602|gb|EFO40297.1| riboflavin biosynthesis protein RibD [Vibrio parahaemolyticus
           AN-5034]
 gi|308114425|gb|EFO51965.1| riboflavin biosynthesis protein RibD [Vibrio parahaemolyticus
           K5030]
          Length = 141

 Score = 35.4 bits (80), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 39/123 (31%), Positives = 53/123 (43%), Gaps = 33/123 (26%)

Query: 7   FMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRA------GNRNRELKDVTAHAEILA 58
           FM  ALE ++NA    +   PVG V V +N+I+S        GN          HAE+ A
Sbjct: 5   FMRRALEVSKNALPECQPNPPVGCVLVKDNQIVSEGHTQAIGGN----------HAEVEA 54

Query: 59  IRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP----KGG 108
           +        Q  L  V  YVTLEPC+       CA  +  + I ++     +P     G 
Sbjct: 55  LNA-----YQGSLESVTAYVTLEPCSFVGRTPACAVTLVKSGIGKVVVAMLDPDPRNSGR 109

Query: 109 GIE 111
           GIE
Sbjct: 110 GIE 112


>gi|328470490|gb|EGF41401.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Vibrio
           parahaemolyticus 10329]
          Length = 141

 Score = 35.4 bits (80), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 39/123 (31%), Positives = 53/123 (43%), Gaps = 33/123 (26%)

Query: 7   FMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRA------GNRNRELKDVTAHAEILA 58
           FM  ALE ++NA    +   PVG V V +N+I+S        GN          HAE+ A
Sbjct: 5   FMRRALEVSKNALPECQPNPPVGCVLVKDNQIVSEGHTQAIGGN----------HAEVEA 54

Query: 59  IRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP----KGG 108
           +        Q  L  V  YVTLEPC+       CA  +  + I ++     +P     G 
Sbjct: 55  LNA-----YQGSLESVTAYVTLEPCSFVGRTPACAVTLVKSGIGKVVVAMLDPDPRNSGR 109

Query: 109 GIE 111
           GIE
Sbjct: 110 GIE 112


>gi|254229831|ref|ZP_04923237.1| Pyrimidine deaminase [Vibrio sp. Ex25]
 gi|262395603|ref|YP_003287456.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Vibrio sp.
           Ex25]
 gi|151937667|gb|EDN56519.1| Pyrimidine deaminase [Vibrio sp. Ex25]
 gi|262339197|gb|ACY52991.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Vibrio sp.
           Ex25]
          Length = 141

 Score = 35.4 bits (80), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 39/123 (31%), Positives = 53/123 (43%), Gaps = 33/123 (26%)

Query: 7   FMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRA------GNRNRELKDVTAHAEILA 58
           FM  ALE ++NA    +   PVG V V +N+I+S        GN          HAE+ A
Sbjct: 5   FMRRALEVSKNALPECQPNPPVGCVLVKDNQIVSEGHTQAIGGN----------HAEVEA 54

Query: 59  IRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP----KGG 108
           +        Q  L  V  YVTLEPC+       CA  +  + I ++     +P     G 
Sbjct: 55  LNA-----YQGSLESVTAYVTLEPCSFVGRTPACAVTLVKSGIGKVVVAMLDPDPRNSGR 109

Query: 109 GIE 111
           GIE
Sbjct: 110 GIE 112


>gi|465877|sp|P33968|YLXG_VIBFI RecName: Full=Uncharacterized deaminase in luxG 3'region
 gi|396216|emb|CAA49769.1| unnamed protein product [Aliivibrio fischeri]
 gi|119116595|dbj|BAF40863.1| putative deoxycytidylate deaminase [Vibrio fischeri]
          Length = 147

 Score = 35.4 bits (80), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 41/87 (47%), Gaps = 18/87 (20%)

Query: 26  VGAVAVLNNKIIS------------RAGNRNRELKDV-TAHAEILAIRMGCRILSQEILP 72
           VGAV   +N+I+S             A    RE+K + T HAE  AI     + ++  L 
Sbjct: 27  VGAVITKHNRIVSVGFNGYPHGVSDSADTDEREIKYLKTLHAEENAI-----LFAKRDLE 81

Query: 73  EVDLYVTLEPCTMCAAAISLARIRRLY 99
             D++VT  PC  CAA I    I ++Y
Sbjct: 82  GCDIWVTHFPCPNCAAKIIQTGISKVY 108


>gi|163783070|ref|ZP_02178065.1| riboflavin specific deaminase [Hydrogenivirga sp. 128-5-R1-1]
 gi|159881750|gb|EDP75259.1| riboflavin specific deaminase [Hydrogenivirga sp. 128-5-R1-1]
          Length = 362

 Score = 35.0 bits (79), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 32/103 (31%), Positives = 46/103 (44%), Gaps = 23/103 (22%)

Query: 53  HAEILAIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPK 106
           HAE++A+       + E      LYVTLEPCT       C  A+  A IR+      +P 
Sbjct: 50  HAEVVALEQ-----AGEKAKGSTLYVTLEPCTHFGRTPPCTDALIRAGIRKAVVAVKDPN 104

Query: 107 ----GGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
               G GIE       L       E+  G+ E+ +R++ +DFF
Sbjct: 105 PVVGGKGIER------LREAGLDVEV--GVLEEEARELNEDFF 139


>gi|21229130|ref|NP_635052.1| deoxycytidylate deaminase [Methanosarcina mazei Go1]
 gi|20907690|gb|AAM32724.1| Deoxycytidylate deaminase [Methanosarcina mazei Go1]
          Length = 172

 Score = 35.0 bits (79), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 25/97 (25%), Positives = 42/97 (43%), Gaps = 6/97 (6%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLN--NKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
            M  A+  AQ +      P+G V + +  ++I+ +  N   +  D   H E  AIR   R
Sbjct: 23  IMCIAVLLAQKSYDEGGCPIGGVIIDSKTHRIVGKGHNTLVQDNDPYNHGETSAIRDAGR 82

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
               +      ++ TL PC +CA  I + +  R+  G
Sbjct: 83  ----QDFSNATIFTTLSPCDVCATLIYMRQFDRVVIG 115


>gi|28901047|ref|NP_800702.1| putative deoxycytidylate deaminase [Vibrio parahaemolyticus RIMD
           2210633]
 gi|260362476|ref|ZP_05775409.1| conserved hypothetical protein [Vibrio parahaemolyticus K5030]
 gi|260879896|ref|ZP_05892251.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein
           [Vibrio parahaemolyticus AN-5034]
 gi|260894571|ref|ZP_05903067.1| protein RibG [Vibrio parahaemolyticus Peru-466]
 gi|28809560|dbj|BAC62535.1| putative deoxycytidylate deaminase [Vibrio parahaemolyticus RIMD
           2210633]
 gi|308086410|gb|EFO36105.1| protein RibG [Vibrio parahaemolyticus Peru-466]
 gi|308091689|gb|EFO41384.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein
           [Vibrio parahaemolyticus AN-5034]
 gi|308113341|gb|EFO50881.1| conserved hypothetical protein [Vibrio parahaemolyticus K5030]
          Length = 154

 Score = 35.0 bits (79), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 31/87 (35%), Positives = 40/87 (45%), Gaps = 18/87 (20%)

Query: 26  VGAVAVLNNKIISRAGN------------RNRELKDV-TAHAEILAIRMGCRILSQEILP 72
           VGAV    N+I+S   N              RELK + T HAE  AI     + S+  L 
Sbjct: 27  VGAVITNQNRIVSVGFNGYPHGVSDSVDTDERELKYLKTLHAEENAI-----LFSKRDLD 81

Query: 73  EVDLYVTLEPCTMCAAAISLARIRRLY 99
             D++VT  PC  CAA I    I R++
Sbjct: 82  GCDIWVTHFPCPNCAAKIIQTGISRVH 108


>gi|226355049|ref|YP_002784789.1| riboflavin biosynthesis protein [Deinococcus deserti VCD115]
 gi|226317039|gb|ACO45035.1| putative Riboflavin biosynthesis protein ribD [Deinococcus deserti
           VCD115]
          Length = 368

 Score = 35.0 bits (79), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 36/113 (31%), Positives = 51/113 (45%), Gaps = 19/113 (16%)

Query: 7   FMSCALEEAQNAALRNEI--PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           +M  AL EA     R     PVG V V + +++ R G   R  +    HAE+ A+R    
Sbjct: 11  YMRLALNEAARGMGRTSPNPPVGCVIVRDGQVVGR-GFHPRAGE---PHAEVFALRE--- 63

Query: 65  ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGA--SNPKGGG 109
             + E       YVTLEPC+       CA A+  A + ++   A   NP+ GG
Sbjct: 64  --AGEYARGATAYVTLEPCSHFGRTPPCADALVAAGVSQVVIAALDPNPRVGG 114


>gi|310800736|gb|EFQ35629.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Glomerella graminicola M1.001]
          Length = 169

 Score = 35.0 bits (79), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 39/143 (27%), Positives = 59/143 (41%), Gaps = 20/143 (13%)

Query: 12  LEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNR--------ELKDVTAHAEILAIRMGC 63
           +E A+ A    + P G+V V  N  I R  +RNR          +D T H E        
Sbjct: 14  IELAKEALDAGDDPFGSVLVGANGSIIRE-DRNRVNTGESGDGRRDGTLHPEFTLAHWAQ 72

Query: 64  RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNP------KGGGIENGTQFY 117
             LS E   +  +Y + E C MCAAA +   +  + + +S+       K  G+E G +  
Sbjct: 73  LNLSAEERAKASVYTSGEHCPMCAAAHAWVGLGPIVFVSSSAQFSAWLKEFGVERGAKVK 132

Query: 118 TLATCHHSPEI-----YPGISEQ 135
            L     +P I      PG+ E+
Sbjct: 133 PLPINEVAPNIPFQGPIPGLDEE 155


>gi|238695103|ref|YP_002922297.1| dCMP deaminase [Enterobacteria phage JSE]
 gi|220029239|gb|ACL78174.1| dCMP deaminase [Enterobacteria phage JSE]
          Length = 168

 Score = 35.0 bits (79), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 2/57 (3%)

Query: 53  HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109
           HAE+ AI    R  S   +    ++ T  PC  CA AI+ + I+ LYY  +  + GG
Sbjct: 83  HAELNAILFAAR--SGVSIEGASMWCTASPCPDCAKAIANSGIKHLYYCDTYDRNGG 137


>gi|227548982|ref|ZP_03979031.1| guanine deaminase [Corynebacterium lipophiloflavum DSM 44291]
 gi|227078933|gb|EEI16896.1| guanine deaminase [Corynebacterium lipophiloflavum DSM 44291]
          Length = 150

 Score = 35.0 bits (79), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 34/95 (35%), Positives = 44/95 (46%), Gaps = 15/95 (15%)

Query: 11 ALEEAQNAALRNEIPVGAVAVL-------NNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
          A+E A  +A     P G V V        +N+++SR         D +AHAEI AIR   
Sbjct: 7  AVEIAVESARTGGGPFGCVVVTERGVYEGHNEVVSRC--------DPSAHAEIQAIRAAA 58

Query: 64 RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98
          R      L    LY + +PC MC AAI  ARI  +
Sbjct: 59 RAQRSHELSGAVLYASGQPCPMCFAAIRWARIDEV 93


>gi|126139263|ref|XP_001386154.1| DRAP deaminase [Scheffersomyces stipitis CBS 6054]
 gi|126093436|gb|ABN68125.1| DRAP deaminase [Scheffersomyces stipitis CBS 6054]
          Length = 585

 Score = 35.0 bits (79), Expect = 3.1,   Method: Composition-based stats.
 Identities = 33/108 (30%), Positives = 49/108 (45%), Gaps = 12/108 (11%)

Query: 7   FMSCALEEAQNA-ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           FM  +LE A      + +  VGAV V   K++  A   +REL   T HAE  A+      
Sbjct: 436 FMELSLEMANKCDETQTQYNVGAVLVNRGKVL--ATGHSRELPGNT-HAEQCALEKYFEE 492

Query: 66  LSQEILPE-VDLYVTLEPCTM-------CAAAISLARIRRLYYGASNP 105
             +  +P+  ++Y T+EPCT+       CA  I    I+  + G   P
Sbjct: 493 TGKREIPKGTEIYTTMEPCTLRLSGNIPCADRIIGTTIKTCFVGIVEP 540


>gi|5726586|gb|AAD48481.1|AF170104_9 unknown [Aliivibrio fischeri]
          Length = 124

 Score = 35.0 bits (79), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 41/87 (47%), Gaps = 18/87 (20%)

Query: 26 VGAVAVLNNKIIS------------RAGNRNRELKDV-TAHAEILAIRMGCRILSQEILP 72
          VGAV   +N+I+S             A    RE+K + T HAE  AI     + ++  L 
Sbjct: 4  VGAVITKHNRIVSVGFNGYPHGVSDSADTDEREIKYLKTLHAEENAI-----LFAKRDLE 58

Query: 73 EVDLYVTLEPCTMCAAAISLARIRRLY 99
            D++VT  PC  CAA I    I ++Y
Sbjct: 59 GCDIWVTHFPCPNCAAKIIQTGISKVY 85


>gi|315639223|ref|ZP_07894385.1| riboflavin biosynthesis protein RibD [Campylobacter upsaliensis
           JV21]
 gi|315480549|gb|EFU71191.1| riboflavin biosynthesis protein RibD [Campylobacter upsaliensis
           JV21]
          Length = 327

 Score = 35.0 bits (79), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 43/177 (24%), Positives = 68/177 (38%), Gaps = 46/177 (25%)

Query: 6   VFMSCALEEAQNAALRNEIPVGAVAVL----NNKIISRAGNRNRELKDVTAHAEILAIRM 61
            +MS AL+EA         P  AV  +    NN+I+S   +     K   AHAE+ AI+ 
Sbjct: 4   FYMSLALKEAWKYQFLT-YPNPAVGCVILDKNNQILSIKAHE----KQGEAHAELNAIKE 58

Query: 62  GCRILS--------------------QEILPEVDLYVTLEPCTM------CAAAISLARI 95
             ++L                     Q++L     +VTLEPC        CA   S    
Sbjct: 59  ALKLLKPEFNFPKEPNALHEFILTNHQKLLQNATAFVTLEPCAHQGKTPPCAKLFSTLEF 118

Query: 96  RRLYYGASNPK---GGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
           ++++    +      GG E   Q   L           GI E+  R++++ F K ++
Sbjct: 119 KKVFVSVKDENQIASGGAEFLRQNGILVEM--------GILEKEGRELLKPFLKWQK 167


>gi|260063122|ref|YP_003196202.1| riboflavin biosynthesis protein RibD [Robiginitalea biformata
           HTCC2501]
 gi|88784691|gb|EAR15861.1| riboflavin biosynthesis protein RibD [Robiginitalea biformata
           HTCC2501]
          Length = 350

 Score = 35.0 bits (79), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 23/59 (38%), Positives = 29/59 (49%), Gaps = 9/59 (15%)

Query: 53  HAEILAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNP 105
           HAE+ AIR    +     LP+  LYVTLEPC        C   I  + IRR+  G  +P
Sbjct: 51  HAEVNAIR---SVADPGKLPDSTLYVTLEPCCHHGKTPPCTDRIIESGIRRVVVGLPDP 106


>gi|332290249|ref|YP_004421101.1| hypothetical protein UMN179_02191 [Gallibacterium anatis UMN179]
 gi|330433145|gb|AEC18204.1| conserved hypothetical protein [Gallibacterium anatis UMN179]
          Length = 372

 Score = 35.0 bits (79), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 39/156 (25%), Positives = 66/156 (42%), Gaps = 21/156 (13%)

Query: 2   KKGNVFMSCALEEAQNAALR--NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
           ++ + FM+ A+E A+           VG V V N +I+ +  +     K    HAE++A+
Sbjct: 8   QQDHQFMALAIELAKKGRFTCTPNPAVGCVLVKNGEIVGKGYHE----KAGEPHAEVMAM 63

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENG 113
           R      + E       YVTLEPC+       CA  +  A ++R+     +P       G
Sbjct: 64  RE-----AGEKANGATAYVTLEPCSHYGRTPPCAKGLIEAGVKRVVAAMQDPNPQVAGRG 118

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +    A      E   G+ +Q++ Q+ + F K  R
Sbjct: 119 LKMLADAGI----ETAVGLLQQQAEQLNKGFLKRMR 150


>gi|283769499|ref|ZP_06342395.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Bulleidia extructa W1219]
 gi|283103767|gb|EFC05153.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Bulleidia extructa W1219]
          Length = 157

 Score = 35.0 bits (79), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 24/70 (34%), Positives = 34/70 (48%), Gaps = 5/70 (7%)

Query: 38  SRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRR 97
           SR GN          HAE+ AI     + S+  + +  +YV+L PC  CA AI  + IRR
Sbjct: 58  SREGNVLETKYPYVVHAELNAI-----LNSKWPVKDCTIYVSLFPCNECAKAIIQSGIRR 112

Query: 98  LYYGASNPKG 107
           + Y +    G
Sbjct: 113 VVYESDKYNG 122


>gi|157311519|ref|YP_001469562.1| deoxycytidylate deaminase [Enterobacteria phage Phi1]
 gi|149380723|gb|ABR24728.1| Cd dCMP deaminase [Enterobacteria phage Phi1]
          Length = 168

 Score = 35.0 bits (79), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 2/57 (3%)

Query: 53  HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109
           HAE+ AI    R  S   +    ++ T  PC  CA AI+ + I+ LYY  +  + GG
Sbjct: 83  HAELNAILFAAR--SGVSIEGASMWCTASPCPDCAKAIANSGIKHLYYCDTYDRNGG 137


>gi|154491828|ref|ZP_02031454.1| hypothetical protein PARMER_01449 [Parabacteroides merdae ATCC
           43184]
 gi|154088069|gb|EDN87114.1| hypothetical protein PARMER_01449 [Parabacteroides merdae ATCC
           43184]
          Length = 395

 Score = 35.0 bits (79), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 29/86 (33%), Positives = 41/86 (47%), Gaps = 13/86 (15%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85
           VGAV V   KII    +R    K   AHAE+ A+     +  + +L +  +YV+LEPC+ 
Sbjct: 76  VGAVIVHKGKIIGEGFHR----KCGEAHAEVNAV---ASVRDEALLRDSTIYVSLEPCSH 128

Query: 86  ------CAAAISLARIRRLYYGASNP 105
                 CA  I    I R+  G  +P
Sbjct: 129 YGKTPPCAELIIRKGIPRVVVGTLDP 154


>gi|127513983|ref|YP_001095180.1| CMP/dCMP deaminase, zinc-binding [Shewanella loihica PV-4]
 gi|126639278|gb|ABO24921.1| CMP/dCMP deaminase, zinc-binding [Shewanella loihica PV-4]
          Length = 149

 Score = 35.0 bits (79), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 30/78 (38%), Positives = 37/78 (47%), Gaps = 18/78 (23%)

Query: 26 VGAVAVLNNKIIS------------RAGNRNRELKDV-TAHAEILAIRMGCRILSQEILP 72
          VGAV   NN+I+S             A   NRE+K + T HAE  AI    R LS     
Sbjct: 27 VGAVITENNRIVSLGFNGYPHGISDSAETDNREMKLLKTLHAEENAILYAKRDLSS---- 82

Query: 73 EVDLYVTLEPCTMCAAAI 90
            +++VT  PC  CAA I
Sbjct: 83 -CEIWVTHFPCPNCAAKI 99


>gi|281491487|ref|YP_003353467.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Lactococcus lactis subsp. lactis KF147]
 gi|281375205|gb|ADA64718.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase/
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Lactococcus lactis subsp. lactis KF147]
          Length = 362

 Score = 35.0 bits (79), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 39/113 (34%), Positives = 50/113 (44%), Gaps = 17/113 (15%)

Query: 1   MKKGNVFMSCALEEAQNAALR-NEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           MKK   +M  A+  A+      N  P VGA+ V   +II +  +     K   AHAEI A
Sbjct: 1   MKKDEYYMDLAIVLAKKGGGNVNPNPQVGALIVKEGRIIGQGYHE----KYGEAHAEINA 56

Query: 59  IRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP 105
            +  C     E      LYVTLEPC        C  AI   RI+R+  G  +P
Sbjct: 57  FK-DCN----ESPEGATLYVTLEPCAHQGKQPPCFEAIIKNRIKRVVIGHLDP 104


>gi|159898944|ref|YP_001545191.1| riboflavin biosynthesis protein RibD [Herpetosiphon aurantiacus
           ATCC 23779]
 gi|159891983|gb|ABX05063.1| riboflavin biosynthesis protein RibD [Herpetosiphon aurantiacus
           ATCC 23779]
          Length = 371

 Score = 35.0 bits (79), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 29/86 (33%), Positives = 40/86 (46%), Gaps = 15/86 (17%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85
           VGAV V   +I+ R   +        AHAE++A+R      + E      LYVTLEPCT+
Sbjct: 30  VGAVVVQAGQIVGRGHTQPAG----QAHAEVMALRE-----AGEQARGASLYVTLEPCTI 80

Query: 86  ------CAAAISLARIRRLYYGASNP 105
                 C  AI  A I  +   + +P
Sbjct: 81  WGRTPPCTDAIIAAGIAEVIIASRDP 106


>gi|270157224|ref|ZP_06185881.1| riboflavin biosynthesis protein RibD [Legionella longbeachae
           D-4968]
 gi|289164378|ref|YP_003454516.1| Riboflavin biosynthesis protein RibD [Legionella longbeachae
           NSW150]
 gi|269989249|gb|EEZ95503.1| riboflavin biosynthesis protein RibD [Legionella longbeachae
           D-4968]
 gi|288857551|emb|CBJ11389.1| Riboflavin biosynthesis protein RibD [Legionella longbeachae
           NSW150]
          Length = 357

 Score = 35.0 bits (79), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 37/110 (33%), Positives = 51/110 (46%), Gaps = 23/110 (20%)

Query: 7   FMSCALEEA---QNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
           F+  ALE+A   Q     N   VGAVAV N  II++A +R       T HAE L      
Sbjct: 5   FLLAALEQARLGQGHCAPNPC-VGAVAVQNGTIIAQAHHRGAG----TPHAEQL------ 53

Query: 64  RILSQ--EILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP 105
            +L+Q     P + LY++LEPC        C  AI    +  + +G  +P
Sbjct: 54  -LLTQIPPKTPGICLYISLEPCNHWGRTPPCVDAIINHGVEEVVFGYLDP 102


>gi|15614117|ref|NP_242420.1| riboflavin specific deaminase [Bacillus halodurans C-125]
 gi|10174171|dbj|BAB05273.1| riboflavin specific
           deaminase(diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase) [Bacillus halodurans C-125]
          Length = 368

 Score = 35.0 bits (79), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 31/104 (29%), Positives = 45/104 (43%), Gaps = 15/104 (14%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           ++ AL E+          VGAV V + +I+    +    LK    HAE+ AIRM     +
Sbjct: 9   LALALAESARGQTSPNPLVGAVVVKDGQIVGMGAH----LKAGEPHAEVHAIRM-----A 59

Query: 68  QEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP 105
            E       YVTLEPC+       CA  +  A + R+     +P
Sbjct: 60  GEKAKGATAYVTLEPCSHYGKTPPCADLLIEAGVARVVIATEDP 103


>gi|302387516|ref|YP_003823338.1| riboflavin biosynthesis protein RibD [Clostridium saccharolyticum
           WM1]
 gi|302198144|gb|ADL05715.1| riboflavin biosynthesis protein RibD [Clostridium saccharolyticum
           WM1]
          Length = 368

 Score = 35.0 bits (79), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 44/118 (37%), Positives = 53/118 (44%), Gaps = 21/118 (17%)

Query: 7   FMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           +M  A+  AQ    L N  P VGAV V   +II   G   R       HAE  AI + CR
Sbjct: 6   YMGMAVRLAQKGCGLVNPNPMVGAVLVKEGRIIGE-GYYERY---GALHAERNAI-LNCR 60

Query: 65  ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP----KGGGIEN 112
               E      LYVTLEPC        C  AI  + IRR+  G+ +P    KG GI+ 
Sbjct: 61  ----ESPEGTTLYVTLEPCCHHGKTPPCTEAILQSGIRRVVIGSHDPNPLVKGKGIKQ 114


>gi|218264485|ref|ZP_03478318.1| hypothetical protein PRABACTJOHN_04018 [Parabacteroides johnsonii
           DSM 18315]
 gi|218221978|gb|EEC94628.1| hypothetical protein PRABACTJOHN_04018 [Parabacteroides johnsonii
           DSM 18315]
          Length = 354

 Score = 35.0 bits (79), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 29/86 (33%), Positives = 41/86 (47%), Gaps = 13/86 (15%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85
           VGAV V   KII    +R    K   AHAE+ A+     +  + +L +  +YV+LEPC+ 
Sbjct: 35  VGAVIVHKGKIIGEGFHR----KCGEAHAEVNAV---ASVRDEALLRDSTIYVSLEPCSH 87

Query: 86  ------CAAAISLARIRRLYYGASNP 105
                 CA  I    I R+  G  +P
Sbjct: 88  YGKTPPCAELIIKKGIPRVVVGTLDP 113


>gi|300769800|ref|ZP_07079680.1| riboflavin biosynthesis protein RibD [Sphingobacterium spiritivorum
           ATCC 33861]
 gi|300763251|gb|EFK60067.1| riboflavin biosynthesis protein RibD [Sphingobacterium spiritivorum
           ATCC 33861]
          Length = 350

 Score = 35.0 bits (79), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 43/100 (43%), Gaps = 19/100 (19%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL---SQEILPEVDLYVTLEP 82
           VGAV V  NKII               HAE+ AI+         +  +L E D+YV+LEP
Sbjct: 28  VGAVIVHENKIIGEGYTSPYG----GPHAEVNAIQQVKDQYPDSADRLLEESDMYVSLEP 83

Query: 83  CTM------CAAAISLARIRRLYYGASNP------KGGGI 110
           C        CA  I    +R++Y    +P      KG GI
Sbjct: 84  CAHFGKTPPCANLIVKHNLRKVYIACMDPFAQVNGKGLGI 123


>gi|183601038|ref|ZP_02962531.1| hypothetical protein PROSTU_04659 [Providencia stuartii ATCC 25827]
 gi|188019376|gb|EDU57416.1| hypothetical protein PROSTU_04659 [Providencia stuartii ATCC 25827]
          Length = 371

 Score = 35.0 bits (79), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 34/114 (29%), Positives = 53/114 (46%), Gaps = 19/114 (16%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57
           +++  ++M+ ALE AQ        P   VG V V + +I+    ++    K    HAE+ 
Sbjct: 2   IEQDRIYMARALELAQKGRFTTS-PNPNVGCVIVRDGEIVGEGYHQ----KAGEPHAEVH 56

Query: 58  AIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP 105
           A+RM     + E       YVTLEPC+       CA A+  A +RR+     +P
Sbjct: 57  ALRM-----AGEKAKGATAYVTLEPCSHHGRTPPCAEALINAGVRRVVAAMQDP 105


>gi|159107798|ref|XP_001704175.1| Hypothetical protein GL50803_8208 [Giardia lamblia ATCC 50803]
 gi|157432229|gb|EDO76501.1| Hypothetical protein GL50803_8208 [Giardia lamblia ATCC 50803]
          Length = 299

 Score = 35.0 bits (79), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 19/83 (22%), Positives = 38/83 (45%), Gaps = 4/83 (4%)

Query: 46  ELKDVTAHAEILAIRMGCRILSQE----ILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
           ++ D+  H    AI    +  +++    +L   D++   EPC  C+  +  AR++R++Y 
Sbjct: 204 KISDMLRHPVYTAIEQAMKQAAEDDKAYLLTGYDVFALEEPCIFCSMCLLHARVKRVFYS 263

Query: 102 ASNPKGGGIENGTQFYTLATCHH 124
           A     GG+       +L   +H
Sbjct: 264 AFMGHNGGLNESLMVPSLPGVNH 286


>gi|323699086|ref|ZP_08110998.1| riboflavin biosynthesis protein RibD [Desulfovibrio sp. ND132]
 gi|323459018|gb|EGB14883.1| riboflavin biosynthesis protein RibD [Desulfovibrio desulfuricans
           ND132]
          Length = 364

 Score = 35.0 bits (79), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 24/79 (30%), Positives = 34/79 (43%), Gaps = 17/79 (21%)

Query: 76  LYVTLEPCTM------CAAAISLARIRRLYYGASNPK---GGGIENGTQFYTLATCHHSP 126
           +YVTLEPC        C  A+  A +  ++ G  +P     GG+E            H  
Sbjct: 65  MYVTLEPCNHHGKTPPCTEALIEAGVAEVFVGTRDPNPVAAGGVEKLRA--------HGI 116

Query: 127 EIYPGISEQRSRQIIQDFF 145
           E+  G+ EQ  R +I DF 
Sbjct: 117 EVTVGVLEQPCRDLIADFL 135


>gi|159184765|ref|NP_354460.2| hypothetical protein Atu1453 [Agrobacterium tumefaciens str. C58]
 gi|159140053|gb|AAK87245.2| conserved hypothetical protein [Agrobacterium tumefaciens str. C58]
          Length = 195

 Score = 35.0 bits (79), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 21/85 (24%), Positives = 39/85 (45%), Gaps = 1/85 (1%)

Query: 15  AQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEV 74
           A+  +L N++  GA  +  + +       N EL++   H E+  ++    +  +    ++
Sbjct: 23  ARGVSLGNKV-FGAAILRKSDLSLVVAETNNELENPLWHGEVHTLKRFYELGEKPNTKDL 81

Query: 75  DLYVTLEPCTMCAAAISLARIRRLY 99
               T EPCTMC +AI+ A     Y
Sbjct: 82  IFLSTHEPCTMCMSAITWAGFDNFY 106


>gi|23098113|ref|NP_691579.1| hypothetical protein OB0658 [Oceanobacillus iheyensis HTE831]
 gi|22776338|dbj|BAC12614.1| hypothetical conserved protein [Oceanobacillus iheyensis HTE831]
          Length = 158

 Score = 35.0 bits (79), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 35/137 (25%), Positives = 57/137 (41%), Gaps = 17/137 (12%)

Query: 12  LEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEIL 71
           +E A+ A    + P G+V V  N  +      +    D T H E    +     ++ E  
Sbjct: 14  IELAKAALETGDEPFGSVLVSANGDVLAEDYNHVSGGDHTQHPEFALAKWAAGNMTSEER 73

Query: 72  PEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPG 131
            +  +Y + E C MCAAA     + R+ Y +S+      E   Q+          EI  G
Sbjct: 74  GKATVYTSGEHCPMCAAAHGWVGLGRIVYASSS------EQLVQWLN--------EI--G 117

Query: 132 ISEQRSRQI-IQDFFKE 147
           ++E R R + IQD  ++
Sbjct: 118 VTESRVRNLPIQDVIRD 134


>gi|226314399|ref|YP_002774295.1| riboflavin biosynthesis protein RibD [Brevibacillus brevis NBRC
          100599]
 gi|226097349|dbj|BAH45791.1| riboflavin biosynthesis protein RibD [Brevibacillus brevis NBRC
          100599]
          Length = 368

 Score = 35.0 bits (79), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 45/88 (51%), Gaps = 15/88 (17%)

Query: 1  MKKGNVFMSCALEEAQNAALRNEIP----VGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56
          M++ + +M  ALE A++A  R +      VGAV V +  I+    +    L+    HAE+
Sbjct: 1  MEQDSKYMDLALELARSA--RGQTSPNPMVGAVIVKDGTIVGMGAH----LRAGEPHAEV 54

Query: 57 LAIRMGCRILSQEILPEVDLYVTLEPCT 84
           A+RM     + E      +YVTLEPC+
Sbjct: 55 HALRM-----AGEKAQGATVYVTLEPCS 77


>gi|254456442|ref|ZP_05069871.1| riboflavin biosynthesis protein RibD [Candidatus Pelagibacter sp.
           HTCC7211]
 gi|207083444|gb|EDZ60870.1| riboflavin biosynthesis protein RibD [Candidatus Pelagibacter sp.
           HTCC7211]
          Length = 353

 Score = 35.0 bits (79), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 32/102 (31%), Positives = 51/102 (50%), Gaps = 17/102 (16%)

Query: 8   MSCALEEAQ-NAALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M  AL+ A+ N  L    P VG + V ++KIIS      +   +   HAE+ AI+     
Sbjct: 1   MDLALDLARSNEGLTGTNPSVGCIIVKHDKIISIG----QTSYNGRPHAEVNAIKN---- 52

Query: 66  LSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYG 101
            S E L +  +YVTLEPC+       C ++I  ++++ + Y 
Sbjct: 53  -SIENLNDATMYVTLEPCSHHGVTPPCTSSIIKSKLKEVIYS 93


>gi|221502412|gb|EEE28139.1| cytidine and deoxycytidylate deaminase zinc-binding region,
           putative [Toxoplasma gondii VEG]
          Length = 692

 Score = 34.7 bits (78), Expect = 3.9,   Method: Composition-based stats.
 Identities = 15/38 (39%), Positives = 23/38 (60%)

Query: 76  LYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENG 113
           +Y + EPC +CA A+  +RI+ L++   N   GGI  G
Sbjct: 625 VYCSHEPCVLCAMALIHSRIKLLFFVHDNKVHGGITRG 662


>gi|221482209|gb|EEE20570.1| cytidine and deoxycytidylate deaminase zinc-binding region
           domain-containing protein, putative [Toxoplasma gondii
           GT1]
          Length = 692

 Score = 34.7 bits (78), Expect = 4.0,   Method: Composition-based stats.
 Identities = 15/38 (39%), Positives = 23/38 (60%)

Query: 76  LYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENG 113
           +Y + EPC +CA A+  +RI+ L++   N   GGI  G
Sbjct: 625 VYCSHEPCVLCAMALIHSRIKLLFFVHDNKVHGGITRG 662


>gi|269961115|ref|ZP_06175483.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
 gi|269834066|gb|EEZ88157.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
          Length = 159

 Score = 34.7 bits (78), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 33/108 (30%), Positives = 50/108 (46%), Gaps = 17/108 (15%)

Query: 7   FMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           FM  ALE ++NA  A +   PVG V V + +I+S    +         HAE+ A++    
Sbjct: 23  FMLRALEVSRNALPACQPNPPVGCVLVKDGEIVSEGHTQAIG----GNHAEVEALKAYNG 78

Query: 65  ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPK 106
            LS     +V  YVTLEPC+       CA  +    I+++     +P 
Sbjct: 79  DLS-----DVTAYVTLEPCSFVGRTPACAKTLVTCGIKKVVVAMLDPD 121


>gi|134299939|ref|YP_001113435.1| riboflavin biosynthesis protein RibD [Desulfotomaculum reducens
           MI-1]
 gi|134052639|gb|ABO50610.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase /
           diaminohydroxyphosphoribosylaminopyrimidine deaminase
           [Desulfotomaculum reducens MI-1]
          Length = 376

 Score = 34.7 bits (78), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 40/150 (26%), Positives = 65/150 (43%), Gaps = 25/150 (16%)

Query: 7   FMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI-RMG 62
           +M+ ALE A  A  R   P   VGAV V + +++     +    K   AHAE++A+   G
Sbjct: 7   YMNMALELAAKARGRTS-PNPMVGAVLVKDGEVV----GKGFHAKAGGAHAEVVALADAG 61

Query: 63  CRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116
            R     +      YVTLEPC        C  A+  A ++R+    ++P       G   
Sbjct: 62  DRAKGATV------YVTLEPCCHHGKTGPCTEALKKAGVKRVVAAMTDPNPLVAGKGLNI 115

Query: 117 YTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
              A      E+  G+ E+ ++++ + F K
Sbjct: 116 LKDAGI----EVVSGLLEEEAKELNEVFIK 141


>gi|227537349|ref|ZP_03967398.1| possible diaminohydroxyphosphoribosylaminopyrimidine deaminase
           [Sphingobacterium spiritivorum ATCC 33300]
 gi|227242852|gb|EEI92867.1| possible diaminohydroxyphosphoribosylaminopyrimidine deaminase
           [Sphingobacterium spiritivorum ATCC 33300]
          Length = 350

 Score = 34.7 bits (78), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 34/103 (33%), Positives = 45/103 (43%), Gaps = 25/103 (24%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQ------EILPEVDLYVT 79
           VGAV V  NKII               HAE+ AI+   ++  Q       +L E D+YV+
Sbjct: 28  VGAVIVHENKIIGEGYTSPYG----GPHAEVNAIQ---QVKDQYPDSADRLLAESDMYVS 80

Query: 80  LEPCTM------CAAAISLARIRRLYYGASNP------KGGGI 110
           LEPC        CA  I    +R++Y    +P      KG GI
Sbjct: 81  LEPCAHFGKTPPCANLIVKHNLRKVYIACMDPFAQVNGKGLGI 123


>gi|71892014|ref|YP_277744.1| pyrimidine deaminase/reductase [Candidatus Blochmannia
           pennsylvanicus str. BPEN]
 gi|71796120|gb|AAZ40871.1| pyrimidine deaminase/reductase [Candidatus Blochmannia
           pennsylvanicus str. BPEN]
          Length = 379

 Score = 34.7 bits (78), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 33/108 (30%), Positives = 49/108 (45%), Gaps = 19/108 (17%)

Query: 7   FMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
           F++ AL+ A        +P   VG V V NNKII         ++   AHAEI A+R   
Sbjct: 12  FLTRALQLAWKGRF-TTMPNPNVGCVIVRNNKIIGEG----YHIRAGEAHAEIHALR--- 63

Query: 64  RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP 105
             ++  +      Y+TLEPC+       C  A+  A I+R+     +P
Sbjct: 64  --IAGNLAQGATAYITLEPCSHYGRTPPCTTALINAGIKRVVVAMLDP 109


>gi|255003850|ref|ZP_05278651.1| riboflavin biosynthesis protein (ribD) [Anaplasma marginale str.
           Virginia]
          Length = 360

 Score = 34.7 bits (78), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 41/149 (27%), Positives = 62/149 (41%), Gaps = 18/149 (12%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVA-VLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           FMS AL  A    L N  P   V  V+ N   S  G R         HAE++A++     
Sbjct: 7   FMSIALRLAHRG-LGNTYPNPTVGCVVTNSAGSIVG-RGWTAMGGRPHAEVVALKQ---- 60

Query: 66  LSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
            + E      +YVTLEPC        C AA+  A +RR+   A +P       G +    
Sbjct: 61  -AGEAAAGSTVYVTLEPCCHHGQTGPCTAALISAGVRRVVIAALDPDKRVSGKGAR---- 115

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKER 148
           +      E+  G+ +Q++ ++   FF  +
Sbjct: 116 SLADSGVEVKLGVLQQQAEELNVGFFYSK 144


>gi|308161963|gb|EFO64392.1| Hypothetical protein GLP15_944 [Giardia lamblia P15]
          Length = 306

 Score = 34.7 bits (78), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 17/61 (27%), Positives = 29/61 (47%), Gaps = 1/61 (1%)

Query: 75  DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS-PEIYPGIS 133
           D++   EPC  C+  +  AR++R++Y       GG+       +L   +H  P +  G S
Sbjct: 229 DVFALEEPCIFCSMCLLHARVKRVFYSTFMRHNGGLNETLMVPSLPGVNHRFPVVKFGWS 288

Query: 134 E 134
           E
Sbjct: 289 E 289


>gi|329929844|ref|ZP_08283520.1| riboflavin biosynthesis protein RibD [Paenibacillus sp. HGF5]
 gi|328935822|gb|EGG32283.1| riboflavin biosynthesis protein RibD [Paenibacillus sp. HGF5]
          Length = 366

 Score = 34.7 bits (78), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 39/148 (26%), Positives = 64/148 (43%), Gaps = 21/148 (14%)

Query: 7   FMSCALEEAQNAALRNEI-PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM-GCR 64
           +MS AL+ A+ A  +  I PV    V+ +  ++  G     L+  T HAE+ A+ M G +
Sbjct: 9   YMSLALDLAERAQGQTGINPVVGCVVVKDGALAGVGTH---LERGTPHAEVHALNMAGPK 65

Query: 65  ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
                +      YVTLEPC+       C+  +    +RR+     +P       G Q   
Sbjct: 66  AAGSTV------YVTLEPCSHYGATPPCSERLIAKGVRRVVVACEDPNPLVAGRGIQMLR 119

Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFK 146
            A      E+  GI + R+ ++ + F K
Sbjct: 120 AAGI----EVETGILKDRALRLNEAFVK 143


>gi|315125800|ref|YP_004067803.1| riboflavin biosynthesis protein [Pseudoalteromonas sp. SM9913]
 gi|315014314|gb|ADT67652.1| riboflavin biosynthesis protein [Pseudoalteromonas sp. SM9913]
          Length = 375

 Score = 34.7 bits (78), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 39/129 (30%), Positives = 56/129 (43%), Gaps = 23/129 (17%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85
           VG V V NNKII    +R         HAE+ A+ M     + E       YVTLEPC+ 
Sbjct: 35  VGCVLVKNNKIIGEGFHRLAG----QGHAEVNALTM-----AGENAKGATAYVTLEPCSH 85

Query: 86  ------CAAAISLARIRRLYYGA--SNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRS 137
                 CA  +  A ++++      SNP+  G   G +    A      E+  G+ E ++
Sbjct: 86  YGRTPPCAEGLKAAGVKKVIAAMVDSNPQVAG--KGLKILADAGI----EVAYGLLEAQA 139

Query: 138 RQIIQDFFK 146
           R +   FFK
Sbjct: 140 RALNFGFFK 148


>gi|56416383|ref|YP_153457.1| riboflavin biosynthesis protein [Anaplasma marginale str. St.
           Maries]
 gi|222474753|ref|YP_002563168.1| riboflavin biosynthesis protein (ribD) [Anaplasma marginale str.
           Florida]
 gi|254994610|ref|ZP_05276800.1| riboflavin biosynthesis protein (ribD) [Anaplasma marginale str.
           Mississippi]
 gi|56387615|gb|AAV86202.1| riboflavin biosynthesis protein [Anaplasma marginale str. St.
           Maries]
 gi|222418889|gb|ACM48912.1| riboflavin biosynthesis protein (ribD) [Anaplasma marginale str.
           Florida]
          Length = 371

 Score = 34.7 bits (78), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 43/149 (28%), Positives = 64/149 (42%), Gaps = 18/149 (12%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVA-VLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           FMS AL  A    L N  P   V  V+ N   S  G R         HAE++A++     
Sbjct: 7   FMSIALRLAHRG-LGNTYPNPTVGCVVTNSAGSIVG-RGWTAMGGRPHAEVVALKQ---- 60

Query: 66  LSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
            + E      +YVTLEPC        C AA+  A +RR+   A +P       G +  +L
Sbjct: 61  -AGEAAAGSTVYVTLEPCCHHGQTGPCTAALISAGVRRVVIAALDPDKRVSGKGAR--SL 117

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKER 148
           A      E+  G+ +Q++ ++   FF  +
Sbjct: 118 ADS--GVEVKLGVLQQQAEELNVGFFYSK 144


>gi|46199115|ref|YP_004782.1| trk system potassium uptake protein trkG [Thermus thermophilus
           HB27]
 gi|55981142|ref|YP_144439.1| Trk system potassium uptake protein TrkG [Thermus thermophilus HB8]
 gi|46196739|gb|AAS81155.1| trk system potassium uptake protein trkG [Thermus thermophilus
           HB27]
 gi|55772555|dbj|BAD70996.1| Trk system potassium uptake protein (TrkG) [Thermus thermophilus
           HB8]
          Length = 490

 Score = 34.7 bits (78), Expect = 4.3,   Method: Composition-based stats.
 Identities = 18/68 (26%), Positives = 34/68 (50%)

Query: 45  RELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASN 104
           RE+        +L +R+G R+LS+E+L +V +++ L        A++LA + + +  A  
Sbjct: 371 REITRTLHPQAVLPLRLGGRVLSEEVLRQVSVFILLYTLLFVLGAVALAFLEKDFVVAFT 430

Query: 105 PKGGGIEN 112
                I N
Sbjct: 431 ASAQAIGN 438


>gi|326388321|ref|ZP_08209917.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Novosphingobium nitrogenifigens DSM 19370]
 gi|326207053|gb|EGD57874.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Novosphingobium nitrogenifigens DSM 19370]
          Length = 321

 Score = 34.7 bits (78), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 30/92 (32%), Positives = 41/92 (44%), Gaps = 24/92 (26%)

Query: 26  VGAVAVLNNKII----SRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81
           VGAV V  N+++    +RAG R         HAE  A+ M     + +      LYVTLE
Sbjct: 28  VGAVLVRENRVVGRGFTRAGGRP--------HAEAEALAM-----AGDATRGATLYVTLE 74

Query: 82  PCT-------MCAAAISLARIRRLYYGASNPK 106
           PC         CA  +  AR  R+  G ++P 
Sbjct: 75  PCAHVSPRGPACADLVVAARPARVVVGCTDPD 106


>gi|330799923|ref|XP_003287990.1| hypothetical protein DICPUDRAFT_78829 [Dictyostelium purpureum]
 gi|325082014|gb|EGC35511.1| hypothetical protein DICPUDRAFT_78829 [Dictyostelium purpureum]
          Length = 234

 Score = 34.7 bits (78), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 20/55 (36%), Positives = 27/55 (49%), Gaps = 5/55 (9%)

Query: 53  HAEILAIR-----MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGA 102
           HAEI AI      M  R + Q       LYVT EPC MC +A+  ++   + +G 
Sbjct: 97  HAEINAILNCTDIMAARGIKQSSWEGYYLYVTGEPCPMCTSALIWSKFDAVIFGT 151


>gi|218660442|ref|ZP_03516372.1| nucleoside triphosphate pyrophosphohydrolase [Rhizobium etli
           IE4771]
          Length = 465

 Score = 34.7 bits (78), Expect = 4.4,   Method: Composition-based stats.
 Identities = 17/57 (29%), Positives = 28/57 (49%)

Query: 44  NRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
           N EL++   H E+  ++    +  +    ++    T EPCTMC +AI+ A     YY
Sbjct: 71  NNELENPLWHGEVHTLKRFYELGDKPATKDLIFLSTHEPCTMCMSAITWAGFDNFYY 127


>gi|294657495|ref|XP_459803.2| DEHA2E11374p [Debaryomyces hansenii CBS767]
 gi|199432736|emb|CAG88042.2| DEHA2E11374p [Debaryomyces hansenii]
          Length = 582

 Score = 34.7 bits (78), Expect = 4.4,   Method: Composition-based stats.
 Identities = 31/108 (28%), Positives = 48/108 (44%), Gaps = 12/108 (11%)

Query: 7   FMSCALEEAQNAA-LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           +M  ALE A      + +  VGAV V N +++  A   +REL   T HAE  A+      
Sbjct: 436 YMELALEMANKCGETQTQFNVGAVLVNNGEVL--ATGHSRELPGNT-HAEQCALEKYFEQ 492

Query: 66  LSQEILPE-VDLYVTLEPCTM-------CAAAISLARIRRLYYGASNP 105
             +  +P   ++Y T+EPC++       C   I    I+  + G   P
Sbjct: 493 TGKREVPAGTEIYTTMEPCSLRLSGNLPCVDRILETNIKTCFVGVVEP 540


>gi|295658617|ref|XP_002789869.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb01]
 gi|226283013|gb|EEH38579.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb01]
          Length = 499

 Score = 34.7 bits (78), Expect = 4.5,   Method: Composition-based stats.
 Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 2/36 (5%)

Query: 74  VDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109
           +DLY+T EPC  CA  + L+R R + Y    P G G
Sbjct: 410 LDLYITHEPCVCCAMGMLLSRFRAVVY--LQPAGEG 443


>gi|330903778|gb|EGH34350.1| cytosine deaminase [Pseudomonas syringae pv. japonica str.
          M301072PT]
          Length = 40

 Score = 34.7 bits (78), Expect = 4.5,   Method: Composition-based stats.
 Identities = 17/39 (43%), Positives = 21/39 (53%)

Query: 5  NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNR 43
          + FM  A +EAQ       IP+G+V V   KII R  NR
Sbjct: 2  DAFMQAAFDEAQLGLKEGGIPIGSVIVHGGKIIGRGHNR 40


>gi|222099734|ref|YP_002534302.1| Riboflavin biosynthesis protein RibD [Thermotoga neapolitana DSM
           4359]
 gi|221572124|gb|ACM22936.1| Riboflavin biosynthesis protein RibD [Thermotoga neapolitana DSM
           4359]
          Length = 348

 Score = 34.7 bits (78), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 38/117 (32%), Positives = 49/117 (41%), Gaps = 17/117 (14%)

Query: 7   FMSCALEEAQNAALR--NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           FM  A+E A+    R     PVGAV V   +IIS   +          HAE +AI    R
Sbjct: 5   FMKRAIELAKKGLGRVNPNPPVGAVVVKEGRIISEGFHPYFG----GPHAERVAIESAKR 60

Query: 65  ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP---KGGGIEN 112
               E L    L VTLEPC        C   I  + I+++  G  +P    G G+E 
Sbjct: 61  --KGEDLTGTTLVVTLEPCDHHGKTPPCTDLIIESGIKKVVIGMRDPNPVSGSGVEK 115


>gi|218246081|ref|YP_002371452.1| riboflavin biosynthesis protein RibD [Cyanothece sp. PCC 8801]
 gi|218166559|gb|ACK65296.1| riboflavin biosynthesis protein RibD [Cyanothece sp. PCC 8801]
          Length = 360

 Score = 34.7 bits (78), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 35/130 (26%), Positives = 54/130 (41%), Gaps = 27/130 (20%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85
           VG+V V N +I+    +     K    HAEI A+R      +QE      +YV+LEPC  
Sbjct: 31  VGSVIVQNGEIVGEGFHP----KAGEPHAEIFALRQ-----AQERAKGATVYVSLEPCNH 81

Query: 86  ------CAAAISLARIRRLYYGASNP----KGGGIENGTQFYTLATCHHSPEIYPGISEQ 135
                 C  A+  A + ++  G  +P     G G+E   +           E+  G+ E 
Sbjct: 82  YGRTPPCTDALIAAGVSKVVVGMVDPNPLVSGKGVEKLQE--------SGIEVVVGVEES 133

Query: 136 RSRQIIQDFF 145
             RQ+ + F 
Sbjct: 134 ACRQLNEAFI 143


>gi|238755138|ref|ZP_04616485.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Yersinia ruckeri
           ATCC 29473]
 gi|238706698|gb|EEP99068.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Yersinia ruckeri
           ATCC 29473]
          Length = 369

 Score = 34.7 bits (78), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 34/114 (29%), Positives = 49/114 (42%), Gaps = 19/114 (16%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57
           M    ++M+ A E A+        P   VG V V + KI+         L+    HAE+ 
Sbjct: 1   MHPDEIYMARAFELARLGRFTTS-PNPNVGCVIVRDGKIV----GEGYHLRAGEPHAEVH 55

Query: 58  AIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP 105
           A+RM     + +       YVTLEPC+       CA A+  A IRR+     +P
Sbjct: 56  ALRM-----AGDAARGATAYVTLEPCSHHGRTPPCADALVAAGIRRVVTAMQDP 104


>gi|258515514|ref|YP_003191736.1| riboflavin biosynthesis protein RibD [Desulfotomaculum acetoxidans
           DSM 771]
 gi|257779219|gb|ACV63113.1| riboflavin biosynthesis protein RibD [Desulfotomaculum acetoxidans
           DSM 771]
          Length = 367

 Score = 34.7 bits (78), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 35/108 (32%), Positives = 49/108 (45%), Gaps = 19/108 (17%)

Query: 7   FMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
           +M  AL+ A  A  R   P   VG+V V N  ++ R  ++    K  T HAEI A++   
Sbjct: 5   YMKMALDLAARARGRTS-PNPMVGSVIVKNGAVVGRGYHK----KAGTPHAEIHALKE-- 57

Query: 64  RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP 105
              + E      +YVTLEPC        C  AI  A I+R     ++P
Sbjct: 58  ---AGEAARGATIYVTLEPCCHHGRTGPCTEAILSAGIKRAVVAMTDP 102


>gi|78188601|ref|YP_378939.1| riboflavin biosynthesis protein RibD [Chlorobium chlorochromatii
           CaD3]
 gi|78170800|gb|ABB27896.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Chlorobium chlorochromatii CaD3]
          Length = 366

 Score = 34.7 bits (78), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 36/108 (33%), Positives = 51/108 (47%), Gaps = 17/108 (15%)

Query: 7   FMSCALEEAQNAALR---NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
           +M  ALE A   A R   N + VGA+ V   +II    +     +   AHAE+ AI    
Sbjct: 9   YMQRALELALRGAGRVSPNPM-VGALLVQEGEIIGEGWHE----RYGEAHAEVNAI---A 60

Query: 64  RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP 105
            + ++  L E  LYVTLEPC+       C+  I   +I R+  G  +P
Sbjct: 61  AVTNEAWLREATLYVTLEPCSHFGKTPPCSDLIIAKQIPRVVVGCRDP 108


>gi|332977386|gb|EGK14164.1| riboflavin biosynthesis protein RibD [Desmospora sp. 8437]
          Length = 368

 Score = 34.7 bits (78), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 40/152 (26%), Positives = 62/152 (40%), Gaps = 23/152 (15%)

Query: 7   FMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
           +M  AL  A+ AA     P   VGAV V + +++    +    LK  T HAE+ A+    
Sbjct: 11  WMELALRLAE-AARGQTSPNPLVGAVVVKDGQLLGSGAH----LKAGTPHAEVHALEQAG 65

Query: 64  RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFY 117
           +      L     YVTLEPC        C      + +RR+  G+++P       G Q  
Sbjct: 66  KSAKGSTL-----YVTLEPCNHYGRTPPCTERTISSGVRRVVVGSTDPDPLVSGKGVQRL 120

Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             A       +  G+   R  ++ + +F  RR
Sbjct: 121 REAGL----SVKTGVLADRCTRLNEAYFHHRR 148


>gi|237843195|ref|XP_002370895.1| Cytidine and deoxycytidylate deaminase zinc-binding
           domain-containing protein [Toxoplasma gondii ME49]
 gi|211968559|gb|EEB03755.1| Cytidine and deoxycytidylate deaminase zinc-binding
           domain-containing protein [Toxoplasma gondii ME49]
          Length = 178

 Score = 34.7 bits (78), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 15/38 (39%), Positives = 23/38 (60%)

Query: 76  LYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENG 113
           +Y + EPC +CA A+  +RI+ L++   N   GGI  G
Sbjct: 111 VYCSHEPCVLCAMALIHSRIKLLFFVHDNNVHGGITRG 148


>gi|153833299|ref|ZP_01985966.1| riboflavin biosynthesis protein RibD [Vibrio harveyi HY01]
 gi|148870435|gb|EDL69356.1| riboflavin biosynthesis protein RibD [Vibrio harveyi HY01]
          Length = 159

 Score = 34.7 bits (78), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 33/108 (30%), Positives = 50/108 (46%), Gaps = 17/108 (15%)

Query: 7   FMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           FM  ALE ++NA  A +   PVG V V + +I+S    +         HAE+ A++    
Sbjct: 23  FMLRALEVSRNALPACQPNPPVGCVLVKDGEIVSEGHTQAIG----GNHAEVEALKAYNG 78

Query: 65  ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPK 106
            LS     +V  YVTLEPC+       CA  +    I+++     +P 
Sbjct: 79  DLS-----DVTAYVTLEPCSFVGRTPACAKTLVTCGIKKVVVAMLDPD 121


>gi|89092520|ref|ZP_01165473.1| putative cytosine deaminase [Oceanospirillum sp. MED92]
 gi|89083032|gb|EAR62251.1| putative cytosine deaminase [Oceanospirillum sp. MED92]
          Length = 188

 Score = 34.7 bits (78), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 20/59 (33%), Positives = 28/59 (47%), Gaps = 9/59 (15%)

Query: 76  LYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISE 134
           L V+LEPC MC A I  A I R+ Y   +  GG          L+ C   P+ +  +S+
Sbjct: 101 LLVSLEPCPMCTARILAAGIGRVIYLVEDQLGG---------MLSHCDRLPDAWVNLSQ 150


>gi|260914242|ref|ZP_05920715.1| riboflavin biosynthesis protein RibD [Pasteurella dagmatis ATCC
           43325]
 gi|260631875|gb|EEX50053.1| riboflavin biosynthesis protein RibD [Pasteurella dagmatis ATCC
           43325]
          Length = 377

 Score = 34.7 bits (78), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 39/152 (25%), Positives = 59/152 (38%), Gaps = 21/152 (13%)

Query: 6   VFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
           VFM  AL+ AQ           VG V V +  I+ +  +     K    HAE++A+R   
Sbjct: 10  VFMQMALDLAQQGQFTTTPNPSVGCVLVKDGSIVGKGFH----FKAGEPHAEVMALRD-- 63

Query: 64  RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFY 117
              + E       YVTLEPC+       CA  +  A + R+     +P       G Q  
Sbjct: 64  ---AGEQAKGATAYVTLEPCSHFGRTPPCAKGLIEAGVARVVSAMRDPNPQVAGKGLQML 120

Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
                    E   G+ E+++  + + F K  R
Sbjct: 121 ----AEQGIESAVGLLEEKAEWLNRGFLKRMR 148


>gi|126662522|ref|ZP_01733521.1| putative deoxycytidylate deaminase [Flavobacteria bacterium BAL38]
 gi|126625901|gb|EAZ96590.1| putative deoxycytidylate deaminase [Flavobacteria bacterium BAL38]
          Length = 142

 Score = 34.7 bits (78), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 31/111 (27%), Positives = 43/111 (38%), Gaps = 14/111 (12%)

Query: 13  EEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRE------------LKDVTAHAEILAIR 60
           +E  N +      VGA+ V N  IIS   N                 K    HAE  AI 
Sbjct: 18  KEWGNLSYCQRKKVGAIIVKNKMIISDGYNGTPSGFENCCEDDANITKWYVLHAEANAIL 77

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIE 111
              R  S +   +  LY+TL PC  C+  I  + I+R+ Y        G++
Sbjct: 78  KVAR--STQSCEDATLYITLSPCKDCSKLIHQSGIKRVVYHQEYKDTSGVD 126


>gi|221135084|ref|ZP_03561387.1| riboflavin biosynthesis protein RibD [Glaciecola sp. HTCC2999]
          Length = 381

 Score = 34.7 bits (78), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 29/91 (31%), Positives = 42/91 (46%), Gaps = 15/91 (16%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQ-----EILPEVDLYVTL 80
           VG V  L+ +II    ++       TAHAE+ A+     +++Q       L E   YVTL
Sbjct: 33  VGCVITLDGEIIGEGHHQQAG----TAHAEVNALWQVNELIAQGKLVATQLKEATAYVTL 88

Query: 81  EPCTM------CAAAISLARIRRLYYGASNP 105
           EPC+       CA A+  A I R+     +P
Sbjct: 89  EPCSHTGRTGPCADALIDAYIGRVVIAMQDP 119


>gi|46109124|ref|XP_381620.1| hypothetical protein FG01444.1 [Gibberella zeae PH-1]
          Length = 428

 Score = 34.7 bits (78), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 13/39 (33%), Positives = 23/39 (58%)

Query: 74  VDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN 112
           ++LYVT EPC  C+  I  +R+ +  +    P+ GG+ +
Sbjct: 345 LELYVTHEPCVSCSMGILHSRMGKAVFATHMPRSGGLSS 383


>gi|257059130|ref|YP_003137018.1| riboflavin biosynthesis protein RibD [Cyanothece sp. PCC 8802]
 gi|256589296|gb|ACV00183.1| riboflavin biosynthesis protein RibD [Cyanothece sp. PCC 8802]
          Length = 360

 Score = 34.7 bits (78), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 35/130 (26%), Positives = 54/130 (41%), Gaps = 27/130 (20%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85
           VG+V V N +I+    +     K    HAEI A+R      +QE      +YV+LEPC  
Sbjct: 31  VGSVIVQNGEIVGEGFHP----KAGEPHAEIFALRQ-----AQERAKGATVYVSLEPCNH 81

Query: 86  ------CAAAISLARIRRLYYGASNP----KGGGIENGTQFYTLATCHHSPEIYPGISEQ 135
                 C  A+  A + ++  G  +P     G G+E   +           E+  G+ E 
Sbjct: 82  YGRTPPCTDALIAAGVSKVVVGMVDPNPLVSGKGVEKLQE--------SGIEVVVGVEES 133

Query: 136 RSRQIIQDFF 145
             RQ+ + F 
Sbjct: 134 ACRQLNEAFI 143


>gi|294101414|ref|YP_003553272.1| CMP/dCMP deaminase zinc-binding protein [Aminobacterium colombiense
           DSM 12261]
 gi|293616394|gb|ADE56548.1| CMP/dCMP deaminase zinc-binding protein [Aminobacterium colombiense
           DSM 12261]
          Length = 168

 Score = 34.7 bits (78), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 33/120 (27%), Positives = 54/120 (45%), Gaps = 10/120 (8%)

Query: 29  VAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAA 88
           V  L +K+   +G R+   +   +HAEI AI     + ++       LY T EPC+ C  
Sbjct: 58  VGCLRDKLGIPSGERHEICRG--SHAEINAIAQAAAVGTRT--EGAVLYCTHEPCSFCTK 113

Query: 89  AISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKER 148
           AI  A IRR+ +    P     E  +Q  +L  C  S +++     Q     ++ F ++R
Sbjct: 114 AIINAGIRRIVFVYPYPDALASEMRSQ-ASLEVCQLSEKVF-----QEMDLALKAFLQQR 167


>gi|289621391|emb|CBI52174.1| unnamed protein product [Sordaria macrospora]
          Length = 157

 Score = 34.7 bits (78), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 17/40 (42%), Positives = 23/40 (57%), Gaps = 3/40 (7%)

Query: 76  LYVTLEPCTMCAAAISLARIRRLYYGAS---NPKGGGIEN 112
           +Y TL PC MC  AI L +I R+  G +    P+ GG E+
Sbjct: 56  IYTTLSPCDMCTGAILLYKIPRVVIGENRTFKPENGGGED 95


>gi|190572874|ref|YP_001970719.1| putative nucleotide deaminase [Stenotrophomonas maltophilia K279a]
 gi|254523836|ref|ZP_05135891.1| CMP/dCMP deaminase, zinc-binding protein [Stenotrophomonas sp.
           SKA14]
 gi|190010796|emb|CAQ44405.1| putative nucleotide deaminase [Stenotrophomonas maltophilia K279a]
 gi|219721427|gb|EED39952.1| CMP/dCMP deaminase, zinc-binding protein [Stenotrophomonas sp.
           SKA14]
          Length = 186

 Score = 34.3 bits (77), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 27/85 (31%), Positives = 39/85 (45%), Gaps = 5/85 (5%)

Query: 25  PVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS----QEILPEVDLYVT 79
           P GAV    ++K+I+   NR        AHAE +A  +  + L       +L  V L  +
Sbjct: 49  PFGAVVFGPDDKVIAAGVNRVMPHATSLAHAENMAYMLAQQRLQTPRLNAVLSPVTLATS 108

Query: 80  LEPCTMCAAAISLARIRRLYYGASN 104
            +PC  C  A   A I RL  GA++
Sbjct: 109 SQPCCQCYGATVWAGIDRLLIGANS 133


>gi|305665639|ref|YP_003861926.1| deoxycytidylate deaminase [Maribacter sp. HTCC2170]
 gi|88710395|gb|EAR02627.1| deoxycytidylate deaminase [Maribacter sp. HTCC2170]
          Length = 147

 Score = 34.3 bits (77), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 30/98 (30%), Positives = 41/98 (41%), Gaps = 14/98 (14%)

Query: 26  VGAVAVLNNKIISRAGN----------RNRE--LKDVTAHAEILAIRMGCRILSQEILPE 73
           VGA+ V +  IIS   N           + E   K    HAE  AI       S +    
Sbjct: 31  VGAIVVKDRMIISDGYNGTPTGFENVCEDEEGYTKWYVLHAEANAISKVAS--STQSCEG 88

Query: 74  VDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIE 111
             LY+TL PC  C+  I  + I+R+ Y  +   G G+E
Sbjct: 89  ATLYITLSPCRECSKLIHQSGIKRVVYKKAYKDGSGLE 126


>gi|323144123|ref|ZP_08078762.1| riboflavin biosynthesis protein RibD [Succinatimonas hippei YIT
           12066]
 gi|322416100|gb|EFY06795.1| riboflavin biosynthesis protein RibD [Succinatimonas hippei YIT
           12066]
          Length = 366

 Score = 34.3 bits (77), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 35/127 (27%), Positives = 54/127 (42%), Gaps = 19/127 (14%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85
           VG V V N  II    +     K    HAEI+A+R     ++         YVTLEPC+ 
Sbjct: 21  VGCVIVRNGMIIGEGYHH----KAGEPHAEIMAMRSAGSSVAG-----ATCYVTLEPCSH 71

Query: 86  ------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139
                 CA A+  A ++R+     +P       G +    A      E+  G+ E ++ +
Sbjct: 72  YGRTPPCAKALVKAGVKRVVIACGDPNPQVAGRGVKILKDAGI----EVDVGLYENKALK 127

Query: 140 IIQDFFK 146
           + + FFK
Sbjct: 128 LNRAFFK 134


>gi|253998546|ref|YP_003050609.1| riboflavin biosynthesis protein RibD [Methylovorus sp. SIP3-4]
 gi|253985225|gb|ACT50082.1| riboflavin biosynthesis protein RibD [Methylovorus sp. SIP3-4]
          Length = 368

 Score = 34.3 bits (77), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 26/86 (30%), Positives = 39/86 (45%), Gaps = 15/86 (17%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85
           VG V V + +I+    +    LK    HAE+ A+R    +         D YVTLEPC+ 
Sbjct: 30  VGCVIVKDGQIVGEGAH----LKAGEPHAEVHALRQAGNLAQ-----GADAYVTLEPCSH 80

Query: 86  ------CAAAISLARIRRLYYGASNP 105
                 CA A+  A ++R+     +P
Sbjct: 81  HGRTPPCADALIKAGVKRVVAAMQDP 106


>gi|171463092|ref|YP_001797205.1| riboflavin biosynthesis protein RibD [Polynucleobacter necessarius
           subsp. necessarius STIR1]
 gi|171192630|gb|ACB43591.1| riboflavin biosynthesis protein RibD [Polynucleobacter necessarius
           subsp. necessarius STIR1]
          Length = 372

 Score = 34.3 bits (77), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 39/117 (33%), Positives = 52/117 (44%), Gaps = 18/117 (15%)

Query: 7   FMSCALEEAQNAA-LRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           FMS AL EAQ A  L N  P VG V     KII R   +        AHAE+ A+    +
Sbjct: 9   FMSEALSEAQKALYLSNPNPRVGCVIAKEGKIIGRGFTQAAG----KAHAEVQAL-ADAK 63

Query: 65  ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPK----GGGIE 111
               +      +YVTLEPC+       C  A+  A+  ++    S+P     G G+E
Sbjct: 64  ARGNDATGST-IYVTLEPCSHTGKTPPCVDALIAAKPSKVIVAMSDPNPLVAGQGLE 119


>gi|162452084|ref|YP_001614451.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Sorangium cellulosum 'So ce 56']
 gi|161162666|emb|CAN93971.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Sorangium cellulosum 'So ce 56']
          Length = 381

 Score = 34.3 bits (77), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 42/153 (27%), Positives = 61/153 (39%), Gaps = 32/153 (20%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG---- 62
            M  A+EEA  A      PVGAV      +++ AG    E+  V  HA     R G    
Sbjct: 16  MMRLAIEEAHKAMPSPNPPVGAV------VLNAAG----EVVAVAHHA-----RAGEEHA 60

Query: 63  ---CRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113
                  + +      LYVTLEPC        C  A+  A I+R+  GA +P    +  G
Sbjct: 61  EGLALAAAGDAARGGTLYVTLEPCNHEGRTPPCVDAVLSAGIKRVVVGAPDPNPSVVGGG 120

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
            Q  + A       +  G++   +R +I  + K
Sbjct: 121 AQRLSDAGL----AVDVGVAGAEARALIAPWTK 149


>gi|149237721|ref|XP_001524737.1| DRAP deaminase [Lodderomyces elongisporus NRRL YB-4239]
 gi|146451334|gb|EDK45590.1| DRAP deaminase [Lodderomyces elongisporus NRRL YB-4239]
          Length = 622

 Score = 34.3 bits (77), Expect = 5.2,   Method: Composition-based stats.
 Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 14/86 (16%)

Query: 7   FMSCALEEAQNAA-LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM---- 61
           +M  AL+EA+     + +  VG V VL+ ++IS     +REL+  T HAE  A+      
Sbjct: 458 YMEMALDEARKCGETQTQFNVGCVLVLDGEVISTG--HSRELEGNT-HAEQCALEKYFAK 514

Query: 62  --GCRILSQEILPEVDLYVTLEPCTM 85
             G R    ++    +LY T+EPC++
Sbjct: 515 NGGIR----DVPLGTELYTTMEPCSL 536


>gi|194016547|ref|ZP_03055161.1| riboflavin biosynthesis protein RibD [Bacillus pumilus ATCC 7061]
 gi|194012020|gb|EDW21588.1| riboflavin biosynthesis protein RibD [Bacillus pumilus ATCC 7061]
          Length = 356

 Score = 34.3 bits (77), Expect = 5.3,   Method: Compositional matrix adjust.
 Identities = 32/108 (29%), Positives = 53/108 (49%), Gaps = 21/108 (19%)

Query: 8   MSCALEEAQNAALRNEIP----VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
           M+ +LE A+  A++ +      VGAV V +N+I+    +    +K    HAEI A++M  
Sbjct: 1   MNLSLENAR--AMKGQTSPNPLVGAVIVRDNEIVGVGAH----MKAGEPHAEIHALKM-- 52

Query: 64  RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP 105
              + +      +YVTLEPC+       CA A+  A +  +   A +P
Sbjct: 53  ---AGDKAKGATIYVTLEPCSHHGRTGPCAEALVKAGVETVVVAALDP 97


>gi|261405997|ref|YP_003242238.1| riboflavin biosynthesis protein RibD [Paenibacillus sp. Y412MC10]
 gi|261282460|gb|ACX64431.1| riboflavin biosynthesis protein RibD [Paenibacillus sp. Y412MC10]
          Length = 369

 Score = 34.3 bits (77), Expect = 5.3,   Method: Compositional matrix adjust.
 Identities = 39/148 (26%), Positives = 64/148 (43%), Gaps = 21/148 (14%)

Query: 7   FMSCALEEAQNAALRNEI-PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM-GCR 64
           +MS AL+ A+ A  +  I PV    V+ +  ++  G     L+  T HAE+ A+ M G +
Sbjct: 12  YMSLALDLAERAQGQTGINPVVGCVVVKDGALAGVGTH---LERGTPHAEVHALNMAGPK 68

Query: 65  ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
                +      YVTLEPC+       C+  +    +RR+     +P       G Q   
Sbjct: 69  AAGSTV------YVTLEPCSHYGATPPCSERLIAEGVRRVVVACEDPNPLVAGRGIQMLR 122

Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFK 146
            A      E+  GI + R+ ++ + F K
Sbjct: 123 AAGI----EVETGILKDRALRLNEAFVK 146


>gi|168187451|ref|ZP_02622086.1| riboflavin biosynthesis protein RibD [Clostridium botulinum C str.
           Eklund]
 gi|169294672|gb|EDS76805.1| riboflavin biosynthesis protein RibD [Clostridium botulinum C str.
           Eklund]
          Length = 372

 Score = 34.3 bits (77), Expect = 5.3,   Method: Compositional matrix adjust.
 Identities = 39/135 (28%), Positives = 60/135 (44%), Gaps = 35/135 (25%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85
           VGAV V +NKII +  +     +    HAE+ A++      + E +    +YVTLEPC+ 
Sbjct: 26  VGAVIVKDNKIIGQGYHE----RFGGLHAEVNALKN-----ATEDVTGATMYVTLEPCSH 76

Query: 86  ------CAAAISLARIRRLYYGASNPK----GGGI----ENGTQFYTLATCHHSPEIYPG 131
                 CA  I  + I+ +  G  +P     G GI    ENG +            +  G
Sbjct: 77  YGKTPPCANTIVKSGIKEVIVGMRDPNELVAGRGINILKENGIK------------VTVG 124

Query: 132 ISEQRSRQIIQDFFK 146
           I E+  ++I + F K
Sbjct: 125 IFEEEIKKINEIFIK 139


>gi|320583405|gb|EFW97618.1| DRAP deaminase, putative [Pichia angusta DL-1]
          Length = 569

 Score = 34.3 bits (77), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 28/84 (33%), Positives = 43/84 (51%), Gaps = 13/84 (15%)

Query: 7   FMSCALEEAQN-AALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI-----R 60
           +M+ ALE+A+    + +   VGAV     ++IS      REL+  T HAE  A+     +
Sbjct: 421 YMALALEQAEKCPQIDSAFRVGAVITCGGEVISTG--HTRELEGNT-HAEQCAMEKYFEK 477

Query: 61  MGCRILSQEILPEVDLYVTLEPCT 84
            G R L     P  ++Y T+EPC+
Sbjct: 478 TGSRTLP----PGCEIYTTMEPCS 497


>gi|298373394|ref|ZP_06983383.1| cytidine/deoxycytidylate deaminase family protein [Bacteroidetes
           oral taxon 274 str. F0058]
 gi|298274446|gb|EFI15998.1| cytidine/deoxycytidylate deaminase family protein [Bacteroidetes
           oral taxon 274 str. F0058]
          Length = 141

 Score = 34.3 bits (77), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 33/98 (33%), Positives = 38/98 (38%), Gaps = 14/98 (14%)

Query: 26  VGAVAVLNNKIISRAGN------------RNRELKDVTAHAEILAIRMGCRILSQEILPE 73
           VGA+ V +  IIS   N             +   K    HAE  AI    R  S      
Sbjct: 32  VGALLVKDKMIISDGYNGTPSGFENCCEDEHNNSKPYVLHAEANAISKVAR--SNNSSDG 89

Query: 74  VDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIE 111
             LYVT  PC  CA  I  A IRR+ YG       G+E
Sbjct: 90  ATLYVTASPCMECAKLIIQAGIRRVVYGEEYRIADGLE 127


>gi|308801951|ref|XP_003078289.1| Scamp4 protein (ISS) [Ostreococcus tauri]
 gi|116056740|emb|CAL53029.1| Scamp4 protein (ISS) [Ostreococcus tauri]
          Length = 363

 Score = 34.3 bits (77), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 14/39 (35%), Positives = 25/39 (64%), Gaps = 1/39 (2%)

Query: 75  DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENG 113
           D+++  EPC MCA A+  +R++R+ + A +   G + NG
Sbjct: 302 DVFLAREPCVMCAMALVHSRLKRVIFAAPDDVNGAL-NG 339


>gi|15618780|ref|NP_225066.1| riboflavin deaminase [Chlamydophila pneumoniae CWL029]
 gi|15836404|ref|NP_300928.1| riboflavin deaminase [Chlamydophila pneumoniae J138]
 gi|16752168|ref|NP_445535.1| riboflavin-specific deaminase [Chlamydophila pneumoniae AR39]
 gi|33242231|ref|NP_877172.1| riboflavin-specific deaminase [Chlamydophila pneumoniae TW-183]
 gi|6225949|sp|Q9Z735|RIBD_CHLPN RecName: Full=Riboflavin biosynthesis protein RibD; Includes:
           RecName:
           Full=Diaminohydroxyphosphoribosylaminopyrimidine
           deaminase; Short=DRAP deaminase; AltName:
           Full=Riboflavin-specific deaminase; Includes: RecName:
           Full=5-amino-6-(5-phosphoribosylamino)uracil reductase;
           AltName: Full=HTP reductase
 gi|4377188|gb|AAD19009.1| Riboflavin Deaminase [Chlamydophila pneumoniae CWL029]
 gi|7189911|gb|AAF38776.1| riboflavin-specific deaminase [Chlamydophila pneumoniae AR39]
 gi|8979245|dbj|BAA99079.1| riboflavin deaminase [Chlamydophila pneumoniae J138]
 gi|33236742|gb|AAP98829.1| riboflavin-specific deaminase [Chlamydophila pneumoniae TW-183]
          Length = 376

 Score = 34.3 bits (77), Expect = 5.5,   Method: Compositional matrix adjust.
 Identities = 33/129 (25%), Positives = 53/129 (41%), Gaps = 19/129 (14%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85
           VG V V  N+II    +          HAE LAI+     +S       D+YV+LEPC+ 
Sbjct: 32  VGCVVVQENRIIGEGFHAYAG----GPHAEELAIQNASMPISGS-----DVYVSLEPCSH 82

Query: 86  ------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139
                 CA  +   ++ R++    +P       G      A      ++Y GI E  ++ 
Sbjct: 83  FGSCPPCANLLIKHKVSRVFVALVDPDPKVAGQGIAMLRQAGI----QVYVGIGESEAQA 138

Query: 140 IIQDFFKER 148
            +Q +  +R
Sbjct: 139 SLQPYLYQR 147


>gi|298373665|ref|ZP_06983654.1| riboflavin biosynthesis protein RibD [Bacteroidetes oral taxon
          274 str. F0058]
 gi|298274717|gb|EFI16269.1| riboflavin biosynthesis protein RibD [Bacteroidetes oral taxon
          274 str. F0058]
          Length = 349

 Score = 34.3 bits (77), Expect = 5.5,   Method: Compositional matrix adjust.
 Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 7/59 (11%)

Query: 26 VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84
          VGAV V + KII    +R    +   AHAE+ A+     +L++++L    LYV LEPC+
Sbjct: 28 VGAVIVRDGKIIGEGYHR----RYGEAHAEVNAVN---SVLNKDLLRRSTLYVNLEPCS 79


>gi|261880389|ref|ZP_06006816.1| cytidine/deoxycytidylate deaminase [Prevotella bergensis DSM 17361]
 gi|270332934|gb|EFA43720.1| cytidine/deoxycytidylate deaminase [Prevotella bergensis DSM 17361]
          Length = 156

 Score = 34.3 bits (77), Expect = 5.5,   Method: Compositional matrix adjust.
 Identities = 34/97 (35%), Positives = 37/97 (38%), Gaps = 14/97 (14%)

Query: 26  VGAVAVLNNKIISRAGN------------RNRELKDVTAHAEILAIRMGCRILSQEILPE 73
           VGA+ V N  IIS   N             N   K    HAE  AI    R  S      
Sbjct: 35  VGALVVKNKMIISDGYNGTPSGFENVCEDDNDLTKPYVLHAEANAITKLAR--SHNNSEG 92

Query: 74  VDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI 110
             LYVT  PC  CA  I  A I+R+ YG       GI
Sbjct: 93  ATLYVTASPCIECAKLIIQAGIKRVVYGEKYRLDDGI 129


>gi|15805190|ref|NP_293877.1| riboflavin-specific deaminase [Deinococcus radiodurans R1]
 gi|6457821|gb|AAF09742.1|AE001878_1 riboflavin-specific deaminase [Deinococcus radiodurans R1]
          Length = 357

 Score = 34.3 bits (77), Expect = 5.5,   Method: Compositional matrix adjust.
 Identities = 28/80 (35%), Positives = 35/80 (43%), Gaps = 7/80 (8%)

Query: 7  FMSCALEEAQNAALRNEI--PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
          +M  AL EA     R     PVG V V + +I S    R    K    HAE+ A+R    
Sbjct: 11 YMQLALNEAAKGLGRTSPNPPVGCVIVRDGEIASEIVGRGFHPKAGEPHAEVFALRE--- 67

Query: 65 ILSQEILPEVDLYVTLEPCT 84
            + E       YVTLEPC+
Sbjct: 68 --AGERARGATAYVTLEPCS 85


>gi|328956808|ref|YP_004374194.1| fused diaminohydroxyphosphoribosylaminopyrimidine deaminase;
           5-amino-6-(5-phosphoribosylamino) uracil reductase
           [Carnobacterium sp. 17-4]
 gi|328673132|gb|AEB29178.1| fused diaminohydroxyphosphoribosylaminopyrimidine deaminase;
           5-amino-6-(5-phosphoribosylamino) uracil reductase
           [Carnobacterium sp. 17-4]
          Length = 355

 Score = 34.3 bits (77), Expect = 5.6,   Method: Compositional matrix adjust.
 Identities = 37/135 (27%), Positives = 61/135 (45%), Gaps = 35/135 (25%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85
           VGAV V   ++I +  ++    K    HAE+ AI     + +++ +    LYVTLEPC+ 
Sbjct: 19  VGAVIVKGGRVIGQGYHQ----KYGQPHAEVNAI-----VSAKKDVTGATLYVTLEPCSH 69

Query: 86  ------CAAAISLARIRRLYYGASNPK----GGGIE----NGTQFYTLATCHHSPEIYPG 131
                 C+  +    I+R+  G  +P     G GIE    NG +  T            G
Sbjct: 70  FGKTPPCSDLLIDKNIKRVVVGTLDPNPLVAGKGIERLRSNGIEVVT------------G 117

Query: 132 ISEQRSRQIIQDFFK 146
           + E+ S+++ + F K
Sbjct: 118 VLEEESQKLNEIFIK 132


>gi|304383732|ref|ZP_07366191.1| riboflavin biosynthesis protein RibD [Prevotella marshii DSM
          16973]
 gi|304335256|gb|EFM01527.1| riboflavin biosynthesis protein RibD [Prevotella marshii DSM
          16973]
          Length = 315

 Score = 34.3 bits (77), Expect = 5.7,   Method: Compositional matrix adjust.
 Identities = 23/58 (39%), Positives = 30/58 (51%), Gaps = 5/58 (8%)

Query: 26 VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83
          VGAV V+ N+II         ++   AHAE+ A    C      +LP   LYV+LEPC
Sbjct: 31 VGAVIVVENRIIGEG----YHVRYGEAHAEVNAFASICP-KDAALLPSATLYVSLEPC 83


>gi|218668008|ref|YP_002424804.1| riboflavin biosynthesis protein RibD [Acidithiobacillus
           ferrooxidans ATCC 23270]
 gi|218520221|gb|ACK80807.1| riboflavin biosynthesis protein RibD [Acidithiobacillus
           ferrooxidans ATCC 23270]
          Length = 366

 Score = 34.3 bits (77), Expect = 5.7,   Method: Compositional matrix adjust.
 Identities = 38/118 (32%), Positives = 53/118 (44%), Gaps = 23/118 (19%)

Query: 7   FMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
           FMS AL  A+   L +  P   VGAV V + ++I R  +    L+    HAE+LA++   
Sbjct: 9   FMSEALVLAEQG-LYSAHPNPCVGAVLVKDGRVIGRGAH----LQAGEPHAEVLALKEAG 63

Query: 64  RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPK----GGGIE 111
                        YVTLEPC+       CA A+  A I R+     +P     G G+E
Sbjct: 64  AAARGATA-----YVTLEPCSHYGRTPPCADALIAAGIARVVIAMRDPNPLVAGRGVE 116


>gi|91788744|ref|YP_549696.1| 5-amino-6-(5-phosphoribosylamino)uracil
           reductase/diaminohydroxyphosphoribosylaminopyrimidine
           deaminase [Polaromonas sp. JS666]
 gi|91697969|gb|ABE44798.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Polaromonas sp.
           JS666]
          Length = 373

 Score = 34.3 bits (77), Expect = 5.7,   Method: Compositional matrix adjust.
 Identities = 40/151 (26%), Positives = 65/151 (43%), Gaps = 12/151 (7%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           MK    F+  ALE A++A  R+E       V+ +    R            AHAEI+A+R
Sbjct: 1   MKPPPPFIDQALELARHAVGRSEPNPRVGCVIASADDQRVLGTGDTQAVGGAHAEIMALR 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGT 114
                  + ++     YVTLEPC+       C  A+  A I+++    ++P    + +G 
Sbjct: 61  DAA--ARRHVVAGATAYVTLEPCSHHGRTGPCCDALIAAGIKKVVASIADPN--PLVSGQ 116

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
            F  +        + PG +E  SR++   FF
Sbjct: 117 GFERMRAAGIEVVVGPGAAE--SRELNIGFF 145


>gi|320586926|gb|EFW99589.1| cytosine deaminase [Grosmannia clavigera kw1407]
          Length = 170

 Score = 34.3 bits (77), Expect = 5.8,   Method: Compositional matrix adjust.
 Identities = 29/110 (26%), Positives = 45/110 (40%), Gaps = 9/110 (8%)

Query: 8   MSCALEEAQNAALRNEIP-------VGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAI 59
           +  AL+EA+       +P       +GA  V  +  ++ +  N+  +L     H E   +
Sbjct: 8   LQIALDEAKAGFAEGGVPPRLTMAQIGAALVSADGTLMGKGRNQRVQLGSPIHHGETSTL 67

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109
               R LS        +Y TL PC MC  A  L  I+R+  G +    GG
Sbjct: 68  YNTGR-LSASAYKGSTMYTTLSPCDMCTGACILYGIKRVVIGENRTFLGG 116


>gi|297621124|ref|YP_003709261.1| putative CMP/dCMP deaminase [Waddlia chondrophila WSU 86-1044]
 gi|297376425|gb|ADI38255.1| putative CMP/dCMP deaminase [Waddlia chondrophila WSU 86-1044]
          Length = 165

 Score = 34.3 bits (77), Expect = 5.8,   Method: Compositional matrix adjust.
 Identities = 24/70 (34%), Positives = 36/70 (51%), Gaps = 1/70 (1%)

Query: 35  KIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLAR 94
           +II+ A NR  E  +V AH EI   +     L++       +Y T E C MCAAA  L  
Sbjct: 40  EIIAEARNRINE-HNVLAHPEIELAQWAANHLTRNKRKLTTMYTTGEHCPMCAAAHGLVG 98

Query: 95  IRRLYYGASN 104
           + ++ Y +S+
Sbjct: 99  LGKIVYISSS 108


>gi|313207146|ref|YP_004046323.1| riboflavin biosynthesis protein ribd [Riemerella anatipestifer DSM
           15868]
 gi|312446462|gb|ADQ82817.1| riboflavin biosynthesis protein RibD [Riemerella anatipestifer DSM
           15868]
 gi|315022456|gb|EFT35483.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase [Riemerella
           anatipestifer RA-YM]
 gi|325335416|gb|ADZ11690.1| Pyrimidine deaminase [Riemerella anatipestifer RA-GD]
          Length = 339

 Score = 34.3 bits (77), Expect = 5.8,   Method: Compositional matrix adjust.
 Identities = 39/128 (30%), Positives = 57/128 (44%), Gaps = 21/128 (16%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85
           VGAV V N  II    +     K    HAEI AI     + ++ +L E  +YV+LEPC+ 
Sbjct: 27  VGAVIVHNGIIIGEGYHH----KAGEPHAEINAIN---SVENKGLLKESTIYVSLEPCSH 79

Query: 86  ------CAAAISLARIRRLYYGA--SNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRS 137
                 CA  I+    +++  G+  SN K  G   G      A      E+   + E+R 
Sbjct: 80  FGRTPPCATKITEIGFKKVVIGSADSNEKVSG--KGKAMIEEAGI----EVVDKVLEERC 133

Query: 138 RQIIQDFF 145
           R + + FF
Sbjct: 134 RWLNRRFF 141


>gi|150024567|ref|YP_001295393.1| dCMP deaminase [Flavobacterium psychrophilum JIP02/86]
 gi|149771108|emb|CAL42575.1| dCMP deaminase [Flavobacterium psychrophilum JIP02/86]
          Length = 142

 Score = 34.3 bits (77), Expect = 5.8,   Method: Compositional matrix adjust.
 Identities = 30/102 (29%), Positives = 41/102 (40%), Gaps = 14/102 (13%)

Query: 22  NEIPVGAVAVLNNKIISRAGN------------RNRELKDVTAHAEILAIRMGCRILSQE 69
           N   VGA+ V +  IIS   N            ++   K    HAE  AI    R  S +
Sbjct: 27  NRKQVGAIIVRDKMIISDGYNGSPSGFENCCEEQDGTTKWYILHAEANAILKVAR--STQ 84

Query: 70  ILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIE 111
                 LY+TL PC  C+  I  + I+R+ Y        G+E
Sbjct: 85  SCEGATLYITLSPCKECSKLIHQSGIKRVVYLEDYKDNSGLE 126


>gi|319955752|ref|YP_004167019.1| riboflavin biosynthesis protein ribd [Cellulophaga algicola DSM
           14237]
 gi|319424412|gb|ADV51521.1| riboflavin biosynthesis protein RibD [Cellulophaga algicola DSM
           14237]
          Length = 351

 Score = 34.3 bits (77), Expect = 5.9,   Method: Compositional matrix adjust.
 Identities = 38/131 (29%), Positives = 54/131 (41%), Gaps = 19/131 (14%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85
           VGAV V  NKII               HAE+ AI     +  + +L    +YVTLEPC+ 
Sbjct: 28  VGAVIVHENKIIGEGYTSPYG----GPHAEVNAINA---VADKNLLVNATIYVTLEPCSH 80

Query: 86  ------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139
                 CA  I   +I+ +  G  +P       G Q    A C     +  G+ E   R+
Sbjct: 81  HGKTPPCADLIIKHKIKNVVVGLLDPHEKVAGQGIQKLKDAGC----TVTVGVLENECRE 136

Query: 140 IIQDF--FKER 148
             + F  F+E+
Sbjct: 137 HHKRFLTFQEK 147


>gi|116748817|ref|YP_845504.1| riboflavin biosynthesis protein RibD [Syntrophobacter fumaroxidans
           MPOB]
 gi|116697881|gb|ABK17069.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Syntrophobacter fumaroxidans MPOB]
          Length = 363

 Score = 34.3 bits (77), Expect = 5.9,   Method: Compositional matrix adjust.
 Identities = 28/101 (27%), Positives = 41/101 (40%), Gaps = 15/101 (14%)

Query: 53  HAEILAIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPK 106
           HAE+ A+R      + +      LYVTLEPC        C  A+  + +  +  G  +P 
Sbjct: 44  HAEVNALRQ-----AGDKARGATLYVTLEPCNHQGRTPPCTRAVLDSGVATVVIGMEDPN 98

Query: 107 GGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
            G    G  F       H   ++ GI E+  R + Q F K 
Sbjct: 99  PGVRGGGASFLR----SHGLRVHAGILEKECRALNQPFIKH 135


>gi|327400004|ref|YP_004340843.1| CMP/dCMP deaminase zinc-binding protein [Archaeoglobus veneficus
           SNP6]
 gi|327315512|gb|AEA46128.1| CMP/dCMP deaminase zinc-binding protein [Archaeoglobus veneficus
           SNP6]
          Length = 159

 Score = 34.3 bits (77), Expect = 5.9,   Method: Compositional matrix adjust.
 Identities = 16/36 (44%), Positives = 21/36 (58%)

Query: 76  LYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIE 111
           LY T +PC MCA  I  A I+++ YG     G G+E
Sbjct: 102 LYTTHQPCIMCAKMIINAGIKKVVYGRRYADGRGLE 137


>gi|94265528|ref|ZP_01289276.1| Riboflavin biosynthesis protein RibD:Riboflavin-specific
           deaminase-like [delta proteobacterium MLMS-1]
 gi|93453969|gb|EAT04315.1| Riboflavin biosynthesis protein RibD:Riboflavin-specific
           deaminase-like [delta proteobacterium MLMS-1]
          Length = 374

 Score = 34.3 bits (77), Expect = 6.1,   Method: Compositional matrix adjust.
 Identities = 37/108 (34%), Positives = 52/108 (48%), Gaps = 19/108 (17%)

Query: 7   FMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
           +M  AL EA+    +   P   VGAV V N +++ +  +R    K    HAE  A+R   
Sbjct: 8   YMRLALAEARKGVGKTA-PNPCVGAVVVKNGRVVGKGWHR----KIGQPHAEAEALRA-- 60

Query: 64  RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP 105
              + E      +YVTLEPC        C+ AI  A IRR+ YG ++P
Sbjct: 61  ---AGEAAAGATIYVTLEPCNHHGRTPPCSEAIIAAGIRRVVYGLADP 105


>gi|314055285|ref|YP_004063623.1| putative CMP/dCMP deaminase zinc-binding [Ostreococcus tauri virus
           2]
 gi|313575176|emb|CBI70189.1| putative CMP/dCMP deaminase zinc-binding [Ostreococcus tauri virus
           2]
          Length = 136

 Score = 34.3 bits (77), Expect = 6.1,   Method: Compositional matrix adjust.
 Identities = 29/107 (27%), Positives = 52/107 (48%), Gaps = 24/107 (22%)

Query: 12  LEEAQNAALR---NEIPVGAVAVLNNKIISRA-------GNRNRELKD----VTAHAEIL 57
           ++ A+ A++R   + + VG V V NN++IS          N    ++D     T HAEI 
Sbjct: 12  MKTAELASVRSPCDRLNVGCVLVKNNRLISMGYNGFLGGSNHTSIVRDGHEQATIHAEIN 71

Query: 58  AI----RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
           A+    + G  I   E+      Y+T  PC  C  A++ + +++++Y
Sbjct: 72  AVTDAAKRGVSIDGTEV------YITHYPCLNCYKALASSGVKKIHY 112


>gi|163789730|ref|ZP_02184167.1| Riboflavin biosynthesis protein RIBD (pirimidine deaminase and
           pirimidine reductase) [Carnobacterium sp. AT7]
 gi|159874952|gb|EDP69019.1| Riboflavin biosynthesis protein RIBD (pirimidine deaminase and
           pirimidine reductase) [Carnobacterium sp. AT7]
          Length = 351

 Score = 34.3 bits (77), Expect = 6.1,   Method: Compositional matrix adjust.
 Identities = 37/135 (27%), Positives = 60/135 (44%), Gaps = 35/135 (25%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85
           VGA+ V   ++I +  ++    K    HAE+ AI       ++E +    LYVTLEPC+ 
Sbjct: 15  VGAIIVKGGRVIGQGYHQ----KYGQPHAEVNAIAS-----AKEDVTGATLYVTLEPCSH 65

Query: 86  ------CAAAISLARIRRLYYGASNPK----GGGIE----NGTQFYTLATCHHSPEIYPG 131
                 C+  +    I+R+  G  +P     G GIE    NG +  T            G
Sbjct: 66  FGKTPPCSDLLIDKNIKRVVVGTLDPNPLVAGKGIERLRSNGIEVVT------------G 113

Query: 132 ISEQRSRQIIQDFFK 146
           + E+ S+++ + F K
Sbjct: 114 VLEEESQKLNEIFIK 128


>gi|253576364|ref|ZP_04853694.1| riboflavin biosynthesis protein RibD [Paenibacillus sp. oral taxon
           786 str. D14]
 gi|251844257|gb|EES72275.1| riboflavin biosynthesis protein RibD [Paenibacillus sp. oral taxon
           786 str. D14]
          Length = 373

 Score = 34.3 bits (77), Expect = 6.2,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 53/119 (44%), Gaps = 25/119 (21%)

Query: 7   FMSCAL---EEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM-G 62
           +M+ AL   E AQ     N + VGAV V +  ++         LK  T HAE+ A+ M G
Sbjct: 9   YMALALDMAERAQGQTGTNPV-VGAVVVKDGALV----GLGTHLKRGTPHAEVHALNMAG 63

Query: 63  CRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPK----GGGIE 111
            +     +      YVTLEPC+       CA  +   +++R+     +P     G GIE
Sbjct: 64  SQAEGSTV------YVTLEPCSHHGLTPPCAERLIHEKVQRVVVACEDPNPLVAGKGIE 116


>gi|113461193|ref|YP_719262.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Haemophilus somnus 129PT]
 gi|112823236|gb|ABI25325.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Haemophilus
           somnus 129PT]
          Length = 376

 Score = 34.3 bits (77), Expect = 6.2,   Method: Compositional matrix adjust.
 Identities = 34/108 (31%), Positives = 45/108 (41%), Gaps = 19/108 (17%)

Query: 7   FMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR-MGC 63
           FM  ALE A+           VG V V N +I+ R  +     K    HAE++A+R  G 
Sbjct: 12  FMQIALELAKKGIFTTTPNPAVGCVLVKNGEIVGRGFH----FKAGQPHAEVMALRDAGD 67

Query: 64  RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP 105
           R            YVTLEPC+       CA  +  A IR +     +P
Sbjct: 68  RAKG------ATAYVTLEPCSHFGRTPPCAQGLIEAGIRNVIVAMKDP 109


>gi|19704838|ref|NP_602333.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Fusobacterium
           nucleatum subsp. nucleatum ATCC 25586]
 gi|296327621|ref|ZP_06870165.1| riboflavin biosynthesis protein RibD [Fusobacterium nucleatum
           subsp. nucleatum ATCC 23726]
 gi|19712714|gb|AAL93632.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase
           [Fusobacterium nucleatum subsp. nucleatum ATCC 25586]
 gi|296155267|gb|EFG96040.1| riboflavin biosynthesis protein RibD [Fusobacterium nucleatum
           subsp. nucleatum ATCC 23726]
          Length = 369

 Score = 34.3 bits (77), Expect = 6.2,   Method: Compositional matrix adjust.
 Identities = 37/127 (29%), Positives = 55/127 (43%), Gaps = 19/127 (14%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85
           VGAV V + KII    ++    K    HAE+ A+       + E      +YVTLEPC+ 
Sbjct: 30  VGAVIVKDGKIIGEGWHK----KFGGPHAEVWALNE-----AGENAKGATVYVTLEPCSH 80

Query: 86  ------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139
                 CA  I  A I+R      +P       G +    A      E+  G+ E+ +++
Sbjct: 81  QGKTPPCAKRIIEAGIKRCVVACIDPNPLVAGKGMKIIENAGI----EVELGVLEKEAKE 136

Query: 140 IIQDFFK 146
           I + FFK
Sbjct: 137 INKIFFK 143


>gi|303228926|ref|ZP_07315736.1| riboflavin biosynthesis protein RibD [Veillonella atypica
           ACS-134-V-Col7a]
 gi|302516340|gb|EFL58272.1| riboflavin biosynthesis protein RibD [Veillonella atypica
           ACS-134-V-Col7a]
          Length = 406

 Score = 34.3 bits (77), Expect = 6.2,   Method: Compositional matrix adjust.
 Identities = 32/101 (31%), Positives = 44/101 (43%), Gaps = 15/101 (14%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85
           VGAV V NN I+    +     K   AHAE+ A+       + +      LYVTLEPC  
Sbjct: 28  VGAVVVKNNTIVGEGYHH----KAGEAHAEVHALDA-----AGDNARGATLYVTLEPCAH 78

Query: 86  ------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
                 CA  +  + I R+  G+++P       G Q  T A
Sbjct: 79  YGKTPPCAKRVVESGIARVVIGSTDPNPLVAGKGIQILTEA 119


>gi|323344020|ref|ZP_08084246.1| cytidine/deoxycytidylate deaminase [Prevotella oralis ATCC 33269]
 gi|323094749|gb|EFZ37324.1| cytidine/deoxycytidylate deaminase [Prevotella oralis ATCC 33269]
          Length = 148

 Score = 34.3 bits (77), Expect = 6.3,   Method: Compositional matrix adjust.
 Identities = 32/88 (36%), Positives = 35/88 (39%), Gaps = 14/88 (15%)

Query: 26  VGAVAVLNNKIISRAGN------------RNRELKDVTAHAEILAIRMGCRILSQEILPE 73
           VGA+ V N  IIS   N             N   K    HAE  AI    R  S      
Sbjct: 33  VGALVVKNKMIISDGYNGTPSGFENVCEDENSITKPYVLHAEANAITKLAR--SSNNSDG 90

Query: 74  VDLYVTLEPCTMCAAAISLARIRRLYYG 101
             LYVT  PC  CA  I  A I+R+ YG
Sbjct: 91  STLYVTASPCIECAKLIIQAGIKRVVYG 118


>gi|325119282|emb|CBZ54836.1| putative cytidine and deoxycytidylate deaminase zinc-binding region
           domain-containing protein [Neospora caninum Liverpool]
          Length = 693

 Score = 34.3 bits (77), Expect = 6.3,   Method: Composition-based stats.
 Identities = 15/38 (39%), Positives = 22/38 (57%)

Query: 76  LYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENG 113
           +Y + EPC +CA A+  +RI+ L +   N   GGI  G
Sbjct: 626 VYCSHEPCVLCAMALIHSRIKLLVFAHDNKVHGGITRG 663


>gi|239613670|gb|EEQ90657.1| conserved hypothetical protein [Ajellomyces dermatitidis ER-3]
          Length = 464

 Score = 34.3 bits (77), Expect = 6.4,   Method: Composition-based stats.
 Identities = 13/27 (48%), Positives = 18/27 (66%)

Query: 74  VDLYVTLEPCTMCAAAISLARIRRLYY 100
           +DLY+T EPC  CA  + L+R R + Y
Sbjct: 373 LDLYITHEPCVCCAMGMLLSRFRAVVY 399


>gi|213018626|ref|ZP_03334434.1| riboflavin biosynthesis protein RibD [Wolbachia endosymbiont of
           Culex quinquefasciatus JHB]
 gi|212995577|gb|EEB56217.1| riboflavin biosynthesis protein RibD [Wolbachia endosymbiont of
           Culex quinquefasciatus JHB]
          Length = 399

 Score = 34.3 bits (77), Expect = 6.4,   Method: Compositional matrix adjust.
 Identities = 36/121 (29%), Positives = 56/121 (46%), Gaps = 31/121 (25%)

Query: 8   MSCALEEAQNAALRNEIP---VGAVAVLNNKIISRA----GNRNRELKDVTAHAEILAIR 60
           MS AL+ A+ + L +  P   VG + V N  +I       G R         HAE++A++
Sbjct: 1   MSIALKLAEKS-LGSVAPNPAVGCIIVKNGMVIGEGYTGIGGR--------PHAEVVALQ 51

Query: 61  MGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPK----GGGI 110
                 ++++     +YVTLEPC        C A I  + I+R+   A +P     GGGI
Sbjct: 52  N-----AKDLTHSATMYVTLEPCCHFGVTEPCTAEIIKSGIKRVVIAAIDPDSRVSGGGI 106

Query: 111 E 111
           +
Sbjct: 107 K 107


>gi|261193096|ref|XP_002622954.1| conserved hypothetical protein [Ajellomyces dermatitidis SLH14081]
 gi|239589089|gb|EEQ71732.1| conserved hypothetical protein [Ajellomyces dermatitidis SLH14081]
          Length = 459

 Score = 34.3 bits (77), Expect = 6.5,   Method: Composition-based stats.
 Identities = 13/27 (48%), Positives = 18/27 (66%)

Query: 74  VDLYVTLEPCTMCAAAISLARIRRLYY 100
           +DLY+T EPC  CA  + L+R R + Y
Sbjct: 368 LDLYITHEPCVCCAMGMLLSRFRAVVY 394


>gi|312131512|ref|YP_003998852.1| riboflavin biosynthesis protein ribd [Leadbetterella byssophila
          DSM 17132]
 gi|311908058|gb|ADQ18499.1| riboflavin biosynthesis protein RibD [Leadbetterella byssophila
          DSM 17132]
          Length = 322

 Score = 34.3 bits (77), Expect = 6.6,   Method: Compositional matrix adjust.
 Identities = 23/58 (39%), Positives = 31/58 (53%), Gaps = 7/58 (12%)

Query: 26 VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83
          VG V V N+KII    +R    K    HAE+ A+     +  + +L E  +YVTLEPC
Sbjct: 24 VGCVIVHNDKIIGEGFHR----KYGQPHAEVNAVD---SVEDKSLLSESTVYVTLEPC 74


>gi|269302657|gb|ACZ32757.1| riboflavin biosynthesis protein RibD [Chlamydophila pneumoniae
           LPCoLN]
          Length = 376

 Score = 34.3 bits (77), Expect = 6.6,   Method: Compositional matrix adjust.
 Identities = 33/129 (25%), Positives = 53/129 (41%), Gaps = 19/129 (14%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85
           VG V V  N+II    +          HAE LAI+     +S       D+YV+LEPC+ 
Sbjct: 32  VGCVVVQENRIIGEGFHAYAG----GPHAEELAIQNASMPISGS-----DVYVSLEPCSH 82

Query: 86  ------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139
                 CA  +   ++ R++    +P       G      A      ++Y GI E  ++ 
Sbjct: 83  FGSRPPCANLLIKYKVSRVFVALVDPDPKVAGQGIAMLRQAGI----QVYVGIGESEAQA 138

Query: 140 IIQDFFKER 148
            +Q +  +R
Sbjct: 139 SLQPYLYQR 147


>gi|327352571|gb|EGE81428.1| tRNA-specific adenosine-34 deaminase subunit Tad3 [Ajellomyces
           dermatitidis ATCC 18188]
          Length = 496

 Score = 34.3 bits (77), Expect = 6.7,   Method: Composition-based stats.
 Identities = 13/27 (48%), Positives = 18/27 (66%)

Query: 74  VDLYVTLEPCTMCAAAISLARIRRLYY 100
           +DLY+T EPC  CA  + L+R R + Y
Sbjct: 405 LDLYITHEPCVCCAMGMLLSRFRAVVY 431


>gi|296118298|ref|ZP_06836879.1| cytidine/deoxycytidylate deaminase, zinc-binding region
           [Corynebacterium ammoniagenes DSM 20306]
 gi|295968856|gb|EFG82100.1| cytidine/deoxycytidylate deaminase, zinc-binding region
           [Corynebacterium ammoniagenes DSM 20306]
          Length = 183

 Score = 34.3 bits (77), Expect = 6.7,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 43/100 (43%), Gaps = 2/100 (2%)

Query: 6   VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELK-DVTAHAEILAIRMGCR 64
            F+   +E A  A    + P G++ V  +  +    +RNR    D T H E    R    
Sbjct: 29  AFLRRCVELAHEALEAGDEPFGSILVSADGDVLFE-DRNRVASGDNTQHPEFAIARWAAA 87

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASN 104
            LS E       Y + E C MCAAA +   + R+ Y +S+
Sbjct: 88  NLSPEERAVATAYTSGEHCPMCAAAHAWVGLGRIVYASSS 127


>gi|310657724|ref|YP_003935445.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino) uracil
           reductase [Clostridium sticklandii DSM 519]
 gi|308824502|emb|CBH20540.1| fused diaminohydroxyphosphoribosylaminopyrimidine deaminase;
           5-amino-6-(5-phosphoribosylamino) uracil reductase
           [Clostridium sticklandii]
          Length = 382

 Score = 33.9 bits (76), Expect = 6.7,   Method: Compositional matrix adjust.
 Identities = 40/121 (33%), Positives = 52/121 (42%), Gaps = 21/121 (17%)

Query: 7   FMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           FM  AL  A+      N  P VGAV V + K+I   G      K   +HAEI AI     
Sbjct: 24  FMKLALSLAEKGRGYVNPNPLVGAVIVKDGKVIGE-GYHTAFGK---SHAEIEAINS--- 76

Query: 65  ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP----KGGGIENGT 114
             + E +    +YVTLEPC        C  AI   ++ R+    ++P     G GIE   
Sbjct: 77  --ATEDIKSATMYVTLEPCCHQGKTPPCTEAIIKNQLARVVVATTDPNPLVSGSGIEKLK 134

Query: 115 Q 115
           Q
Sbjct: 135 Q 135


>gi|297838973|ref|XP_002887368.1| hypothetical protein ARALYDRAFT_894978 [Arabidopsis lyrata subsp.
          lyrata]
 gi|297333209|gb|EFH63627.1| hypothetical protein ARALYDRAFT_894978 [Arabidopsis lyrata subsp.
          lyrata]
          Length = 81

 Score = 33.9 bits (76), Expect = 6.7,   Method: Compositional matrix adjust.
 Identities = 13/24 (54%), Positives = 19/24 (79%)

Query: 75 DLYVTLEPCTMCAAAISLARIRRL 98
          D+++ LEPCTMCA A+   RI+R+
Sbjct: 50 DIFLMLEPCTMCAMALVHQRIKRI 73


>gi|302384784|ref|YP_003820606.1| dCMP deaminase [Clostridium saccharolyticum WM1]
 gi|302195412|gb|ADL02983.1| dCMP deaminase [Clostridium saccharolyticum WM1]
          Length = 164

 Score = 33.9 bits (76), Expect = 6.8,   Method: Compositional matrix adjust.
 Identities = 16/32 (50%), Positives = 20/32 (62%)

Query: 76  LYVTLEPCTMCAAAISLARIRRLYYGASNPKG 107
           LYVTL PC  CA AI  A I+ + YG+   +G
Sbjct: 101 LYVTLFPCNECAKAIIQAGIKTIVYGSDKYEG 132


>gi|237742612|ref|ZP_04573093.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase
           [Fusobacterium sp. 4_1_13]
 gi|229430260|gb|EEO40472.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase
           [Fusobacterium sp. 4_1_13]
          Length = 369

 Score = 33.9 bits (76), Expect = 6.8,   Method: Compositional matrix adjust.
 Identities = 36/127 (28%), Positives = 55/127 (43%), Gaps = 19/127 (14%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85
           VGAV V + KII    ++    K    HAE+ A+       ++E      +YVTLEPC+ 
Sbjct: 30  VGAVIVKDGKIIGEGWHK----KFGGPHAEVWALNE-----AEENAEGATIYVTLEPCSH 80

Query: 86  ------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139
                 CA  I  A I+R      +P       G +    A       +  G+ E+ +++
Sbjct: 81  QGKTPPCAKRIVEAGIKRCVVACIDPNPLVAGKGIKIIENAGIT----VKLGVLEKEAKE 136

Query: 140 IIQDFFK 146
           I + FFK
Sbjct: 137 INKIFFK 143


>gi|312129766|ref|YP_003997106.1| cmp/dcmp deaminase zinc-binding protein [Leadbetterella byssophila
           DSM 17132]
 gi|311906312|gb|ADQ16753.1| CMP/dCMP deaminase zinc-binding protein [Leadbetterella byssophila
           DSM 17132]
          Length = 152

 Score = 33.9 bits (76), Expect = 6.9,   Method: Compositional matrix adjust.
 Identities = 40/142 (28%), Positives = 62/142 (43%), Gaps = 35/142 (24%)

Query: 2   KKGNVFMSCALEEAQNA-ALRNEIPVGAVAVLNNKIIS------RAGNRN---------- 44
           K  ++FM  A++ A+ +  +R +  VGAV V + +IIS       AG  N          
Sbjct: 5   KFDDIFMDLAIQLAKRSHCVRAQ--VGAVLVNDTRIISIGYNGPPAGTHNCDDEFGEQGC 62

Query: 45  -RELK---DVTAHAE----ILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIR 96
            R+ K    +  HAE    + A + G  +          LYVTL PC  CA  I   +I+
Sbjct: 63  PRDSKGSCSLALHAEQNAILYATKNGANVEGST------LYVTLSPCIACARVIFSMKIK 116

Query: 97  RLYY--GASNPKGGGIENGTQF 116
           +++Y    +  KG   + G  F
Sbjct: 117 KVFYLNSYAEYKGLSSDEGVDF 138


>gi|297622519|ref|YP_003703953.1| riboflavin biosynthesis protein RibD [Truepera radiovictrix DSM
           17093]
 gi|297163699|gb|ADI13410.1| riboflavin biosynthesis protein RibD [Truepera radiovictrix DSM
           17093]
          Length = 393

 Score = 33.9 bits (76), Expect = 6.9,   Method: Compositional matrix adjust.
 Identities = 39/118 (33%), Positives = 53/118 (44%), Gaps = 34/118 (28%)

Query: 7   FMSCALEEAQ---NAALRNEIPVGAVAVLNNKIIS-----RAGNRNRELKDVTAHAEILA 58
           +MS ALE A+    +   N + VG V V +++II      RAG          AHAE+ A
Sbjct: 15  YMSRALELAERGRGSTAPNPM-VGCVIVRDDEIIGEGWHERAGE---------AHAEVRA 64

Query: 59  IR----MGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPK 106
           ++     G R+          LYVTLEPC        C  AI  A +RR+   A +P 
Sbjct: 65  LQDARSRGARVRG------ATLYVTLEPCNHTGRTPPCTEAILEAGVRRVVIAALDPD 116


>gi|258651398|ref|YP_003200554.1| CMP/dCMP deaminase zinc-binding [Nakamurella multipartita DSM
           44233]
 gi|258554623|gb|ACV77565.1| CMP/dCMP deaminase zinc-binding [Nakamurella multipartita DSM
           44233]
          Length = 164

 Score = 33.9 bits (76), Expect = 7.1,   Method: Compositional matrix adjust.
 Identities = 25/93 (26%), Positives = 37/93 (39%)

Query: 12  LEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEIL 71
           +E A+ A    + P G+V V  +  +    +      D T H E    R     LS    
Sbjct: 13  VELAEQALDSGDEPFGSVLVTGDGTVLAEDHNRVAGGDRTRHPEFELARWAAANLSPHER 72

Query: 72  PEVDLYVTLEPCTMCAAAISLARIRRLYYGASN 104
               +Y + E C MCAAA +   + R+ Y  S 
Sbjct: 73  RAATVYTSGEHCPMCAAAHAWVGLGRIVYATST 105


>gi|316934111|ref|YP_004109093.1| riboflavin biosynthesis protein RibD [Rhodopseudomonas palustris
           DX-1]
 gi|315601825|gb|ADU44360.1| riboflavin biosynthesis protein RibD [Rhodopseudomonas palustris
           DX-1]
          Length = 389

 Score = 33.9 bits (76), Expect = 7.1,   Method: Compositional matrix adjust.
 Identities = 34/107 (31%), Positives = 45/107 (42%), Gaps = 17/107 (15%)

Query: 7   FMSCALEEAQNAALRNEI--PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           FM  AL   +    R      VGAV V +  I+ R   ++        HAE+ A+R    
Sbjct: 30  FMQLALALGRRGQGRTGTNPAVGAVLVKDGVIVGRGWTQDGGRP----HAEVEALRR--- 82

Query: 65  ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP 105
             + E      LYVTLEPC+       CA AI  A I R+     +P
Sbjct: 83  --AGEAARGATLYVTLEPCSHHGRSPPCADAIVAAGIARVVSAIEDP 127


>gi|238918989|ref|YP_002932503.1| riboflavin biosynthesis protein RibD, [Edwardsiella ictaluri
           93-146]
 gi|238868557|gb|ACR68268.1| riboflavin biosynthesis protein RibD, putative [Edwardsiella
           ictaluri 93-146]
          Length = 373

 Score = 33.9 bits (76), Expect = 7.1,   Method: Compositional matrix adjust.
 Identities = 27/86 (31%), Positives = 41/86 (47%), Gaps = 15/86 (17%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85
           VG V V +++I+    +    L+    HAE+LA+RM     + E       YVTLEPC+ 
Sbjct: 33  VGCVLVRDDRIVGEGFH----LRAGEPHAEVLALRM-----AGEQARGATAYVTLEPCSH 83

Query: 86  ------CAAAISLARIRRLYYGASNP 105
                 CA A+  A + R+     +P
Sbjct: 84  HGRTPPCADALVAAGVSRVVAAMQDP 109


>gi|297154385|gb|ADI04097.1| cytidine/deoxycytidylate deaminase, zinc-binding region
           [Streptomyces bingchenggensis BCW-1]
          Length = 158

 Score = 33.9 bits (76), Expect = 7.2,   Method: Compositional matrix adjust.
 Identities = 25/93 (26%), Positives = 39/93 (41%)

Query: 12  LEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEIL 71
           +E A  A    + P G+V V  +  +    + +    D T H E    R     L+ E  
Sbjct: 14  VELAAEALEAGDEPFGSVLVAADGAVLFEDHNHVAGGDHTRHPEFEIARWAAAHLTPEER 73

Query: 72  PEVDLYVTLEPCTMCAAAISLARIRRLYYGASN 104
               +Y + E C MCAAA     + R+ Y +S+
Sbjct: 74  AAATVYTSGEHCPMCAAAHGWVGLGRIVYASSS 106


>gi|167746303|ref|ZP_02418430.1| hypothetical protein ANACAC_01012 [Anaerostipes caccae DSM 14662]
 gi|167654296|gb|EDR98425.1| hypothetical protein ANACAC_01012 [Anaerostipes caccae DSM 14662]
          Length = 354

 Score = 33.9 bits (76), Expect = 7.2,   Method: Compositional matrix adjust.
 Identities = 25/79 (31%), Positives = 38/79 (48%), Gaps = 14/79 (17%)

Query: 75  DLYVTLEPCTM------CAAAISLARIRRLYYG--ASNPKGGGIENGTQFYTLATCHHSP 126
           +LYVTLEPC        C  A+  + IR++Y G    NPK  G+  G +        H  
Sbjct: 61  ELYVTLEPCCHYGKTPPCTEAVIKSGIRKVYVGNVDPNPKVAGM--GIKILR----EHGI 114

Query: 127 EIYPGISEQRSRQIIQDFF 145
           ++  GI ++  R++   FF
Sbjct: 115 KVETGILDEECRELNDIFF 133


>gi|68171296|ref|ZP_00544696.1| Riboflavin biosynthesis protein RibD [Ehrlichia chaffeensis str.
           Sapulpa]
 gi|88658608|ref|YP_506994.1| riboflavin biosynthesis protein RibD [Ehrlichia chaffeensis str.
           Arkansas]
 gi|67999277|gb|EAM85926.1| Riboflavin biosynthesis protein RibD [Ehrlichia chaffeensis str.
           Sapulpa]
 gi|88600065|gb|ABD45534.1| riboflavin biosynthesis protein RibD [Ehrlichia chaffeensis str.
           Arkansas]
          Length = 360

 Score = 33.9 bits (76), Expect = 7.2,   Method: Compositional matrix adjust.
 Identities = 36/122 (29%), Positives = 52/122 (42%), Gaps = 31/122 (25%)

Query: 7   FMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRA----GNRNRELKDVTAHAEILAI 59
           FMS AL  A+   L N  P   VG + V +  ++ R     G R         HAE++A+
Sbjct: 8   FMSLALRIARRG-LGNVFPNPAVGCIVVNHGMVVGRGYTQVGGR--------PHAEVIAL 58

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPK----GGG 109
                +     +     YVTLEPC+       CA  +  A ++R+   A +P     G G
Sbjct: 59  NNAGHLAKGSTV-----YVTLEPCSHYGQTGPCALKLIDAGVKRMVIAAKDPDVRVSGNG 113

Query: 110 IE 111
           IE
Sbjct: 114 IE 115


>gi|311993486|ref|YP_004010351.1| Cd dCMP deaminase [Acinetobacter phage Acj9]
 gi|295917443|gb|ADG60114.1| Cd dCMP deaminase [Acinetobacter phage Acj9]
          Length = 181

 Score = 33.9 bits (76), Expect = 7.3,   Method: Compositional matrix adjust.
 Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 2/48 (4%)

Query: 53  HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
           HAE+ AI    +  +   +    +YVTL PC  CA AI+ + IR+L Y
Sbjct: 92  HAELNAILYAAK--NGLAIDGATMYVTLSPCADCAKAIANSGIRQLVY 137


>gi|281357052|ref|ZP_06243542.1| riboflavin biosynthesis protein RibD [Victivallis vadensis ATCC
           BAA-548]
 gi|281316610|gb|EFB00634.1| riboflavin biosynthesis protein RibD [Victivallis vadensis ATCC
           BAA-548]
          Length = 346

 Score = 33.9 bits (76), Expect = 7.3,   Method: Compositional matrix adjust.
 Identities = 39/131 (29%), Positives = 52/131 (39%), Gaps = 24/131 (18%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI----RMGCRILSQEILPEVDLYVTLE 81
           VGAV V + +II     R    K    HAEI A+    + G       I      YVTLE
Sbjct: 32  VGAVIVRDGEII----GRGYHCKAGEPHAEINALIDVEKHGLDAKGATI------YVTLE 81

Query: 82  PCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQ 135
           PC+       C  AI  A I R+  G+ +P       G Q    A      ++  G+   
Sbjct: 82  PCSTVGRTPACTDAIRAAGISRVVIGSLDPNPKHAGRGVQLLEEAGI----QVTVGVERA 137

Query: 136 RSRQIIQDFFK 146
              +I + FFK
Sbjct: 138 ACGEINRPFFK 148


>gi|168181552|ref|ZP_02616216.1| riboflavin biosynthesis protein RibD [Clostridium botulinum Bf]
 gi|237796324|ref|YP_002863876.1| riboflavin biosynthesis protein RibD [Clostridium botulinum Ba4
           str. 657]
 gi|182674971|gb|EDT86932.1| riboflavin biosynthesis protein RibD [Clostridium botulinum Bf]
 gi|229264059|gb|ACQ55092.1| riboflavin biosynthesis protein RibD [Clostridium botulinum Ba4
           str. 657]
          Length = 365

 Score = 33.9 bits (76), Expect = 7.4,   Method: Compositional matrix adjust.
 Identities = 44/158 (27%), Positives = 68/158 (43%), Gaps = 29/158 (18%)

Query: 1   MKKGNVFMSCALEEAQNAALR-NEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           M+  N +M   L+ A+    + N  P VGA+ V NNKII    ++         HAE+ A
Sbjct: 1   MEDYNFYMEKTLKLAERGEGKVNPNPKVGAIVVKNNKIIGEGYHKYFG----GPHAEVYA 56

Query: 59  IRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP----KGG 108
           +R      + E      +YVTLEPC+       CA  I    I +      +P    +G 
Sbjct: 57  LRE-----AGEKAKGATIYVTLEPCSHYGKTPPCAEYIVKMGISKAIIAMKDPNPLVEGR 111

Query: 109 GIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
           GI+   Q        +  E+   I E+ S+++ + F K
Sbjct: 112 GIDILKQ--------NGIEVVTEIMEKESKKLNEVFIK 141


>gi|296133286|ref|YP_003640533.1| riboflavin biosynthesis protein RibD [Thermincola sp. JR]
 gi|296031864|gb|ADG82632.1| riboflavin biosynthesis protein RibD [Thermincola potens JR]
          Length = 385

 Score = 33.9 bits (76), Expect = 7.4,   Method: Compositional matrix adjust.
 Identities = 29/81 (35%), Positives = 41/81 (50%), Gaps = 13/81 (16%)

Query: 7  FMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
          +M  ALE A  A   N  P   VGAV V + ++I +       +K  T HAE+ A+R   
Sbjct: 8  YMRMALELAAKAR-GNTSPNPMVGAVIVKDGRVIGKG----YHMKAGTPHAEVHALRE-- 60

Query: 64 RILSQEILPEVDLYVTLEPCT 84
             + E+     +YVTLEPC+
Sbjct: 61 ---AGELSRGATMYVTLEPCS 78


>gi|332829184|gb|EGK01848.1| hypothetical protein HMPREF9455_01996 [Dysgonomonas gadei ATCC
           BAA-286]
          Length = 147

 Score = 33.9 bits (76), Expect = 7.5,   Method: Compositional matrix adjust.
 Identities = 31/97 (31%), Positives = 39/97 (40%), Gaps = 16/97 (16%)

Query: 26  VGAVAVLNNKIISRAGN------------RNRELKDVTAHAEILAI-RMGCRILSQEILP 72
           VGA+ V +  IIS   N             N E K    HAE  AI ++ C   S     
Sbjct: 31  VGALIVKDKMIISDGYNGTPAGFENICEDENNETKPYVLHAEANAITKVAC---SHNSSM 87

Query: 73  EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109
              +YVT  PC  CA  I  A I+R+ Y     +  G
Sbjct: 88  GATMYVTTSPCIECAKLIIQAGIKRVVYNQKYRRSDG 124


>gi|120404037|ref|YP_953866.1| CMP/dCMP deaminase [Mycobacterium vanbaalenii PYR-1]
 gi|119956855|gb|ABM13860.1| CMP/dCMP deaminase, zinc-binding protein [Mycobacterium vanbaalenii
           PYR-1]
          Length = 159

 Score = 33.9 bits (76), Expect = 7.5,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 45/100 (45%), Gaps = 2/100 (2%)

Query: 6   VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNR-ELKDVTAHAEILAIRMGCR 64
           VF+   +  A+ A    + P G++ V +   + R  + NR +  D T H E    R    
Sbjct: 9   VFLRRCVSLARTALDGGDEPFGSLLVDHEGSV-RFEDHNRVKDGDATRHPEFAIARWAVE 67

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASN 104
            LS        +Y + E C MCAAA +   + R+ Y AS+
Sbjct: 68  HLSPAQRNRSTVYTSGEHCPMCAAAHAWVGLGRVVYAASS 107


>gi|94264512|ref|ZP_01288299.1| Riboflavin biosynthesis protein RibD:Riboflavin-specific
           deaminase-like [delta proteobacterium MLMS-1]
 gi|93455071|gb|EAT05298.1| Riboflavin biosynthesis protein RibD:Riboflavin-specific
           deaminase-like [delta proteobacterium MLMS-1]
          Length = 374

 Score = 33.9 bits (76), Expect = 7.6,   Method: Compositional matrix adjust.
 Identities = 37/108 (34%), Positives = 52/108 (48%), Gaps = 19/108 (17%)

Query: 7   FMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
           +M  AL EA+    +   P   VGAV V N +++ +  +R    K    HAE  A+R   
Sbjct: 8   YMRLALAEARKGVGKTA-PNPCVGAVVVKNGRVVGKGWHR----KIGQPHAEAEALRA-- 60

Query: 64  RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP 105
              + E      +YVTLEPC        C+ AI  A IRR+ YG ++P
Sbjct: 61  ---AGEAAAGATIYVTLEPCNHLGRTPPCSEAIIAAGIRRVVYGLADP 105


>gi|310722262|ref|YP_003969086.1| dCMP deaminase [Aeromonas phage phiAS4]
 gi|306021105|gb|ADM79640.1| dCMP deaminase [Aeromonas phage phiAS4]
          Length = 172

 Score = 33.9 bits (76), Expect = 7.6,   Method: Compositional matrix adjust.
 Identities = 19/58 (32%), Positives = 32/58 (55%), Gaps = 5/58 (8%)

Query: 53  HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGA---SNPKG 107
           HAE+ AI    +  + + +   +++VT+ PC  CA AI+ + I+R+ Y      NP G
Sbjct: 85  HAELNAILYAAK--TGQSIDGAEMHVTVSPCPDCAKAIAQSGIKRVVYNELYDRNPSG 140


>gi|189500554|ref|YP_001960024.1| riboflavin biosynthesis protein RibD [Chlorobium phaeobacteroides
           BS1]
 gi|189495995|gb|ACE04543.1| riboflavin biosynthesis protein RibD [Chlorobium phaeobacteroides
           BS1]
          Length = 371

 Score = 33.9 bits (76), Expect = 7.7,   Method: Compositional matrix adjust.
 Identities = 43/148 (29%), Positives = 63/148 (42%), Gaps = 19/148 (12%)

Query: 7   FMSCALEEA-QNAALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           +MS  LE A + A   +  P VG++ VL+ +II    +          HAE+ AI     
Sbjct: 15  YMSRCLELAGKGAGYVSPNPMVGSLLVLDGQIIGEGYHERYG----GPHAEVNAI---AS 67

Query: 65  ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
           +   E L E  LYV LEPC+       C+  I    I R+     +P       G Q   
Sbjct: 68  VKDSEQLRESTLYVNLEPCSHHGKTPPCSDLIIQKNIPRVVVACRDPHRMVAGRGIQKLL 127

Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFK 146
            A      E+  G+ E+RS ++ + F K
Sbjct: 128 DAGV----EVIEGVLEERSLKLNEAFMK 151


>gi|57640359|ref|YP_182837.1| riboflavin biosynthesis protein RibD [Thermococcus kodakarensis
           KOD1]
 gi|57158683|dbj|BAD84613.1| riboflavin biosynthesis protein RibD [Thermococcus kodakarensis
           KOD1]
          Length = 353

 Score = 33.9 bits (76), Expect = 7.8,   Method: Compositional matrix adjust.
 Identities = 40/118 (33%), Positives = 51/118 (43%), Gaps = 18/118 (15%)

Query: 7   FMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           FM  ALE A+      N  P VGAV V + KII    +R    K    HAEI AI    +
Sbjct: 8   FMRLALELAKRGEGWTNPNPMVGAVIVKDGKIIGVGWHR----KFGEKHAEINAIE-DAK 62

Query: 65  ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPK----GGGIEN 112
               ++     +YVTLEPC+       CA  I     +R+     +P     G GIE 
Sbjct: 63  AKGYDVR-GATMYVTLEPCSHWGKQPPCADRIIQEGFKRVVVAMEDPNPLVAGQGIEK 119


>gi|302549165|ref|ZP_07301507.1| cytidine/deoxycytidylate deaminase [Streptomyces viridochromogenes
           DSM 40736]
 gi|302466783|gb|EFL29876.1| cytidine/deoxycytidylate deaminase [Streptomyces viridochromogenes
           DSM 40736]
          Length = 161

 Score = 33.9 bits (76), Expect = 7.9,   Method: Compositional matrix adjust.
 Identities = 26/93 (27%), Positives = 39/93 (41%)

Query: 12  LEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEIL 71
           +E A  A    + P G+V V  +  +    +      D T H E    R     L+ E  
Sbjct: 15  VELAAEALDAGDEPFGSVLVGGDGTVLGEDHNRVASGDHTRHPEFELARWSASHLTPEER 74

Query: 72  PEVDLYVTLEPCTMCAAAISLARIRRLYYGASN 104
               +Y + E C MCAAA +   + R+ Y AS+
Sbjct: 75  AAATVYTSGEHCPMCAAAHAWVGLGRIVYVASS 107


>gi|58698891|ref|ZP_00373757.1| riboflavin biosynthesis protein RibD [Wolbachia endosymbiont of
           Drosophila ananassae]
 gi|58534587|gb|EAL58720.1| riboflavin biosynthesis protein RibD [Wolbachia endosymbiont of
           Drosophila ananassae]
          Length = 167

 Score = 33.9 bits (76), Expect = 7.9,   Method: Compositional matrix adjust.
 Identities = 41/155 (26%), Positives = 65/155 (41%), Gaps = 31/155 (20%)

Query: 7   FMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRA----GNRNRELKDVTAHAEILAI 59
           FMS AL  A+   L N  P   VG V V +  I+S      G R         HAE++A+
Sbjct: 6   FMSIALRLAEKN-LGNVAPNPAVGCVIVKDGTIVSEGYTGIGGR--------PHAEVVAL 56

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENG 113
           +      +++      +Y+TLEPC        C A I  A I+R+     +P       G
Sbjct: 57  QN-----AKDSTHGATIYITLEPCCHHGVTGPCTAKIIKASIKRVVIATIDPDSRVSGRG 111

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKER 148
            +    A      E+  GI ++ ++++   FF  +
Sbjct: 112 MKALKEA----GIEVEQGIMQKEAKELNVGFFTTK 142


>gi|58699421|ref|ZP_00374173.1| riboflavin biosynthesis protein RibD [Wolbachia endosymbiont of
           Drosophila ananassae]
 gi|225630417|ref|YP_002727208.1| riboflavin biosynthesis protein RibD [Wolbachia sp. wRi]
 gi|58534061|gb|EAL58308.1| riboflavin biosynthesis protein RibD [Wolbachia endosymbiont of
           Drosophila ananassae]
 gi|225592398|gb|ACN95417.1| riboflavin biosynthesis protein RibD [Wolbachia sp. wRi]
          Length = 360

 Score = 33.9 bits (76), Expect = 7.9,   Method: Compositional matrix adjust.
 Identities = 41/155 (26%), Positives = 65/155 (41%), Gaps = 31/155 (20%)

Query: 7   FMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRA----GNRNRELKDVTAHAEILAI 59
           FMS AL  A+   L N  P   VG V V +  I+S      G R         HAE++A+
Sbjct: 6   FMSIALRLAEKN-LGNVAPNPAVGCVIVKDGTIVSEGYTGIGGR--------PHAEVVAL 56

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENG 113
           +      +++      +Y+TLEPC        C A I  A I+R+     +P       G
Sbjct: 57  QN-----AKDSTHGATIYITLEPCCHHGVTGPCTAKIIKASIKRVVIATIDPDSRVSGRG 111

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKER 148
            +    A      E+  GI ++ ++++   FF  +
Sbjct: 112 MK----ALKEAGIEVEQGIMQKEAKELNVGFFTTK 142


>gi|289432876|ref|YP_003462749.1| riboflavin biosynthesis protein RibD [Dehalococcoides sp. GT]
 gi|288946596|gb|ADC74293.1| riboflavin biosynthesis protein RibD [Dehalococcoides sp. GT]
          Length = 365

 Score = 33.9 bits (76), Expect = 8.0,   Method: Compositional matrix adjust.
 Identities = 42/150 (28%), Positives = 68/150 (45%), Gaps = 25/150 (16%)

Query: 7   FMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           +MS AL  A+ A   +     VGAV V N +++ + G       D   HAEI+A++    
Sbjct: 3   YMSQALSLAKLAIGQVSPNPSVGAVIVKNGEVVGQ-GFTQPPGGD---HAEIVALKQ--- 55

Query: 65  ILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGA--SNPKGGGIENGTQF 116
             + E      LYVTLEPC        C  ++  + I+ +Y      NP   G   G + 
Sbjct: 56  --AAEKAKGATLYVTLEPCCHQGRTPPCTGSVIASGIKEVYIATLDDNPLVSG--KGKKE 111

Query: 117 YTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
              A      +++ G+ E+ +RQ+ + +FK
Sbjct: 112 LEAAGI----KVHLGMMEREARQMNEAYFK 137


>gi|229819944|ref|YP_002881470.1| CMP/dCMP deaminase zinc-binding [Beutenbergia cavernae DSM 12333]
 gi|229565857|gb|ACQ79708.1| CMP/dCMP deaminase zinc-binding [Beutenbergia cavernae DSM 12333]
          Length = 163

 Score = 33.9 bits (76), Expect = 8.2,   Method: Compositional matrix adjust.
 Identities = 28/91 (30%), Positives = 43/91 (47%), Gaps = 2/91 (2%)

Query: 15  AQNAALRNEIPVGAVAVLNNKIISRAGNRNR-ELKDVTAHAEILAIRMGCRILSQEILPE 73
           A+ A    + P G++ V     + R  +RNR +  D T H E+   R     LS E    
Sbjct: 20  AREALDDGDEPFGSLLVDATGAV-RFEDRNRVKGGDQTRHPELEIARWAAAHLSPEERAA 78

Query: 74  VDLYVTLEPCTMCAAAISLARIRRLYYGASN 104
             +Y + E C MC+AA +   + R+ Y AS+
Sbjct: 79  AVVYTSGEHCPMCSAAHAWVGLGRIVYAASS 109


>gi|194364457|ref|YP_002027067.1| CMP/dCMP deaminase zinc-binding [Stenotrophomonas maltophilia
           R551-3]
 gi|194347261|gb|ACF50384.1| CMP/dCMP deaminase zinc-binding [Stenotrophomonas maltophilia
           R551-3]
          Length = 186

 Score = 33.9 bits (76), Expect = 8.2,   Method: Compositional matrix adjust.
 Identities = 27/85 (31%), Positives = 38/85 (44%), Gaps = 5/85 (5%)

Query: 25  PVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS----QEILPEVDLYVT 79
           P GAV     +K+I+   NR        AHAE +A  +  + L       +L  V L  +
Sbjct: 49  PFGAVVFGPEDKVIAAGVNRVMPHSTSLAHAENMAYMLAQQRLQTPRLNAVLSPVTLATS 108

Query: 80  LEPCTMCAAAISLARIRRLYYGASN 104
            +PC  C  A   A I RL  GA++
Sbjct: 109 SQPCCQCYGATVWAGIDRLLIGANS 133


>gi|32491211|ref|NP_871465.1| hypothetical protein WGLp462 [Wigglesworthia glossinidia
           endosymbiont of Glossina brevipalpis]
 gi|25166418|dbj|BAC24608.1| ribD [Wigglesworthia glossinidia endosymbiont of Glossina
           brevipalpis]
          Length = 384

 Score = 33.9 bits (76), Expect = 8.2,   Method: Compositional matrix adjust.
 Identities = 33/130 (25%), Positives = 58/130 (44%), Gaps = 19/130 (14%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85
           VG V VLN  I+    ++       + HAEI A+++  +           +YVTLEPC+ 
Sbjct: 30  VGCVIVLNKSIVGEGYHKIPG----SDHAEICALKLAGKYAKGS-----TVYVTLEPCSH 80

Query: 86  ------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139
                 CA A+  A+++ +   A +P    + +G  F  L       ++   I  ++S +
Sbjct: 81  HGKTPSCAQALINAKVKEVIASAVDP--NPLVSGKGFSMLKNA--GIKVKYNIMSEKSIK 136

Query: 140 IIQDFFKERR 149
           +   FFK  +
Sbjct: 137 LNLGFFKRMK 146


>gi|320102303|ref|YP_004177894.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Isosphaera
           pallida ATCC 43644]
 gi|319749585|gb|ADV61345.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Isosphaera
           pallida ATCC 43644]
          Length = 387

 Score = 33.9 bits (76), Expect = 8.3,   Method: Compositional matrix adjust.
 Identities = 40/151 (26%), Positives = 64/151 (42%), Gaps = 27/151 (17%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           ++ AL E     +     VGA+ V   +++ R  +R    +    HAE+ A+R     LS
Sbjct: 3   LALALAERGRGHVEPNPMVGALIVRGGEVVGRGWHR----RFGGPHAEVEALRS----LS 54

Query: 68  QEILPE-VDLYVTLEPC------TMCAAAISLARIRRLYYGASNP----KGGGIENGTQF 116
              L     L+VTLEPC        C  AI  A I R+    ++P     GGG+    + 
Sbjct: 55  DPALARGATLFVTLEPCCHVGKTPPCTQAILEAGITRVVAAMADPFPKVAGGGL-AALRA 113

Query: 117 YTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
             +  CH       G+ E  +R++   + K+
Sbjct: 114 AGVEVCH-------GLEETAARRLNAAYLKQ 137


>gi|258510212|ref|YP_003183646.1| CMP/dCMP deaminase zinc-binding [Alicyclobacillus acidocaldarius
           subsp. acidocaldarius DSM 446]
 gi|257476938|gb|ACV57257.1| CMP/dCMP deaminase zinc-binding [Alicyclobacillus acidocaldarius
           subsp. acidocaldarius DSM 446]
          Length = 151

 Score = 33.9 bits (76), Expect = 8.6,   Method: Compositional matrix adjust.
 Identities = 23/99 (23%), Positives = 40/99 (40%), Gaps = 27/99 (27%)

Query: 22  NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEV------- 74
             + VG V V + +II+   N        + H +   + +GC+++    +  +       
Sbjct: 28  TRLQVGCVVVRDKRIIASGYNG-------SIHGDEHCVDVGCKVVDGHCVRAIHAEQNAL 80

Query: 75  -------------DLYVTLEPCTMCAAAISLARIRRLYY 100
                        DLYVT  PC  C  ++  A IRR++Y
Sbjct: 81  LQCARFGIAAEGADLYVTHTPCLTCTKSLIQAGIRRVFY 119


>gi|195576792|ref|XP_002078257.1| GD22640 [Drosophila simulans]
 gi|194190266|gb|EDX03842.1| GD22640 [Drosophila simulans]
          Length = 500

 Score = 33.9 bits (76), Expect = 8.6,   Method: Composition-based stats.
 Identities = 25/82 (30%), Positives = 37/82 (45%), Gaps = 5/82 (6%)

Query: 71  LPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG---IENGTQFYT-LATCHHSP 126
           +P +D  +T E      A  SL R+    Y   +P GG    +E GT  +  +   H+ P
Sbjct: 345 MPYLDQTIT-ETLRKYPALSSLTRLASEDYEIPSPDGGDPVVLEKGTSVHIPVLAIHYDP 403

Query: 127 EIYPGISEQRSRQIIQDFFKER 148
           E+YP   E R  +   D  +ER
Sbjct: 404 EVYPEPHEFRPERFAPDACRER 425


>gi|317052209|ref|YP_004113325.1| riboflavin biosynthesis protein RibD [Desulfurispirillum indicum
           S5]
 gi|316947293|gb|ADU66769.1| riboflavin biosynthesis protein RibD [Desulfurispirillum indicum
           S5]
          Length = 377

 Score = 33.9 bits (76), Expect = 8.6,   Method: Compositional matrix adjust.
 Identities = 27/84 (32%), Positives = 40/84 (47%), Gaps = 14/84 (16%)

Query: 31  VLNNKIISRAG---NRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM-- 85
           V+ + I+  AG         K   AHAE++A++      + E      LYVTLEPC +  
Sbjct: 30  VVGSVIVDAAGAIVGMGYHAKAGMAHAEVVALKD-----AGEKARGATLYVTLEPCCVQG 84

Query: 86  ----CAAAISLARIRRLYYGASNP 105
               C  AI  A I+++ Y A +P
Sbjct: 85  RTPPCTDAIIRAGIQKVVYAAQDP 108


>gi|109290173|ref|YP_656422.1| dCMP deaminase [Aeromonas phage 25]
 gi|104345846|gb|ABF72746.1| dCMP deaminase [Aeromonas phage 25]
          Length = 172

 Score = 33.9 bits (76), Expect = 8.6,   Method: Compositional matrix adjust.
 Identities = 19/58 (32%), Positives = 32/58 (55%), Gaps = 5/58 (8%)

Query: 53  HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGA---SNPKG 107
           HAE+ AI    +  + + +   +++VT+ PC  CA AI+ + I+R+ Y      NP G
Sbjct: 85  HAELNAILYAAK--TGQSIDGAEMHVTVSPCPDCAKAIAQSGIKRVVYNELYDRNPSG 140


>gi|86159164|ref|YP_465949.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase /
           diaminohydroxyphosphoribosylaminopyrimidine deaminase
           [Anaeromyxobacter dehalogenans 2CP-C]
 gi|85775675|gb|ABC82512.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase /
           diaminohydroxyphosphoribosylaminopyrimidine deaminase
           [Anaeromyxobacter dehalogenans 2CP-C]
          Length = 392

 Score = 33.9 bits (76), Expect = 8.6,   Method: Compositional matrix adjust.
 Identities = 15/37 (40%), Positives = 23/37 (62%), Gaps = 6/37 (16%)

Query: 75  DLYVTLEPCTM------CAAAISLARIRRLYYGASNP 105
           D+Y TLEPC        C+ A+  A +RR++ G+S+P
Sbjct: 89  DVYTTLEPCDHFGKTPPCSVALLEAGVRRVFVGSSDP 125


>gi|319778563|ref|YP_004129476.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase [Taylorella
           equigenitalis MCE9]
 gi|317108587|gb|ADU91333.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase [Taylorella
           equigenitalis MCE9]
          Length = 379

 Score = 33.9 bits (76), Expect = 8.7,   Method: Compositional matrix adjust.
 Identities = 27/95 (28%), Positives = 45/95 (47%), Gaps = 14/95 (14%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85
           VG V V N++II     +       + HAEI+A++       ++++ +  LYVTLEPC+ 
Sbjct: 21  VGCVIVHNDEIIGEGATQIAG----SHHAEIMALKDARMRGHEDLIADAILYVTLEPCSH 76

Query: 86  ------CAAAISLARIRRLYYGASNPK----GGGI 110
                 C  A+    I+ +   + +P     G GI
Sbjct: 77  FGRTPPCTDALISNGIKHVVIASPDPNPIVGGNGI 111


>gi|33620697|ref|NP_891789.1| dCMP deaminase [Enterobacteria phage RB49]
 gi|33438567|gb|AAL15123.2| dCMP deaminase [Enterobacteria phage RB49]
          Length = 168

 Score = 33.9 bits (76), Expect = 8.7,   Method: Compositional matrix adjust.
 Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 2/57 (3%)

Query: 53  HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109
           HAE+ AI    R  +   +    ++ T  PC  CA AI+ + I+ LYY  +  + GG
Sbjct: 83  HAELNAILFAAR--NGVSIEGASMWCTASPCPDCAKAIANSGIKHLYYCDTYDRNGG 137


>gi|113969440|ref|YP_733233.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Shewanella sp. MR-4]
 gi|113884124|gb|ABI38176.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Shewanella sp. MR-4]
          Length = 381

 Score = 33.9 bits (76), Expect = 8.7,   Method: Compositional matrix adjust.
 Identities = 35/115 (30%), Positives = 53/115 (46%), Gaps = 19/115 (16%)

Query: 5   NVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
           N  MS A++ A+      R    VG V V +N+I+    ++    K    HAE+ A+RM 
Sbjct: 8   NQMMSRAIQLARKGFYTTRPNPSVGCVIVKDNQIVGEGYHQ----KAGEPHAEVHALRM- 62

Query: 63  CRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGAS--NPKGGG 109
               + E+      YVTLEPC+       CA A+    ++R+       NP+ GG
Sbjct: 63  ----AGELARGATAYVTLEPCSHYGRTPPCALALINIGVKRVVVAVEDPNPQVGG 113


>gi|156977316|ref|YP_001448222.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Vibrio
           harveyi ATCC BAA-1116]
 gi|156528910|gb|ABU73995.1| hypothetical protein VIBHAR_06102 [Vibrio harveyi ATCC BAA-1116]
          Length = 201

 Score = 33.5 bits (75), Expect = 8.8,   Method: Compositional matrix adjust.
 Identities = 32/107 (29%), Positives = 49/107 (45%), Gaps = 17/107 (15%)

Query: 7   FMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           FM  ALE + NA  A +   PVG V V + +I+S    +         HAE+ A++    
Sbjct: 65  FMLRALEVSLNALPACQPNPPVGCVLVKDGEIVSEGHTQAIG----GNHAEVEALKA--- 117

Query: 65  ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP 105
              +  L +V  YVTLEPC+       CA  +    I+++     +P
Sbjct: 118 --YKGDLSDVTAYVTLEPCSFVGRTPACAKTLVTCGIKKVVVAMLDP 162


>gi|255732273|ref|XP_002551060.1| DRAP deaminase [Candida tropicalis MYA-3404]
 gi|240131346|gb|EER30906.1| DRAP deaminase [Candida tropicalis MYA-3404]
          Length = 590

 Score = 33.5 bits (75), Expect = 9.0,   Method: Composition-based stats.
 Identities = 26/82 (31%), Positives = 42/82 (51%), Gaps = 6/82 (7%)

Query: 7   FMSCALEEAQNAA-LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR--MGC 63
           FM  A+E+A+     + +  VG V V N K+IS     +REL   T HAE  A+      
Sbjct: 439 FMEMAIEQAEKCGETQTQFNVGCVLVNNGKVISTG--HSRELPGNT-HAEQCALEKYFAE 495

Query: 64  RILSQEILPEVDLYVTLEPCTM 85
               +E+    +++ T+EPC++
Sbjct: 496 HDGVKEVPEGTEIFTTMEPCSL 517


>gi|114046668|ref|YP_737218.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase /
           diaminohydroxyphosphoribosylaminopyrimidine deaminase
           [Shewanella sp. MR-7]
 gi|113888110|gb|ABI42161.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase /
           diaminohydroxyphosphoribosylaminopyrimidine deaminase
           [Shewanella sp. MR-7]
          Length = 381

 Score = 33.5 bits (75), Expect = 9.0,   Method: Compositional matrix adjust.
 Identities = 35/115 (30%), Positives = 53/115 (46%), Gaps = 19/115 (16%)

Query: 5   NVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
           N  MS A++ A+      R    VG V V +N+I+    ++    K    HAE+ A+RM 
Sbjct: 8   NQMMSRAIQLARKGFYTTRPNPSVGCVIVKDNQIVGEGYHQ----KAGEPHAEVHALRM- 62

Query: 63  CRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGAS--NPKGGG 109
               + E+      YVTLEPC+       CA A+    ++R+       NP+ GG
Sbjct: 63  ----AGELARGATAYVTLEPCSHYGRTPPCALALINIGVKRVVVAVEDPNPQVGG 113


>gi|197123236|ref|YP_002135187.1| riboflavin biosynthesis protein RibD [Anaeromyxobacter sp. K]
 gi|196173085|gb|ACG74058.1| riboflavin biosynthesis protein RibD [Anaeromyxobacter sp. K]
          Length = 392

 Score = 33.5 bits (75), Expect = 9.1,   Method: Compositional matrix adjust.
 Identities = 15/37 (40%), Positives = 23/37 (62%), Gaps = 6/37 (16%)

Query: 75  DLYVTLEPCTM------CAAAISLARIRRLYYGASNP 105
           D+Y TLEPC        C+ A+  A +RR++ G+S+P
Sbjct: 89  DVYTTLEPCDHFGKTPPCSVALLEAGVRRVFVGSSDP 125


>gi|253996924|ref|YP_003048988.1| riboflavin biosynthesis protein RibD [Methylotenera mobilis JLW8]
 gi|253983603|gb|ACT48461.1| riboflavin biosynthesis protein RibD [Methylotenera mobilis JLW8]
          Length = 372

 Score = 33.5 bits (75), Expect = 9.1,   Method: Compositional matrix adjust.
 Identities = 24/86 (27%), Positives = 39/86 (45%), Gaps = 15/86 (17%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85
           VG V V + +I+ +  +     K    HAE+ A+R    +         D+YVTLEPC+ 
Sbjct: 32  VGCVIVRDQQIVGQGAHH----KAGEPHAEVFALRQAGALAE-----GADVYVTLEPCSH 82

Query: 86  ------CAAAISLARIRRLYYGASNP 105
                 C  A+  A+ +R+     +P
Sbjct: 83  FGRTPPCVQAVIAAKPKRVVIAMQDP 108


>gi|304437387|ref|ZP_07397346.1| riboflavin biosynthesis protein RibD [Selenomonas sp. oral taxon
           149 str. 67H29BP]
 gi|304369643|gb|EFM23309.1| riboflavin biosynthesis protein RibD [Selenomonas sp. oral taxon
           149 str. 67H29BP]
          Length = 367

 Score = 33.5 bits (75), Expect = 9.2,   Method: Compositional matrix adjust.
 Identities = 23/59 (38%), Positives = 29/59 (49%), Gaps = 11/59 (18%)

Query: 53  HAEILAIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP 105
           HAEI A+RM     + E+     LYVTLEPC        CA A+  A I R+     +P
Sbjct: 52  HAEIHALRM-----AGELARGATLYVTLEPCAHQGRTGPCAKAVIAAGITRVVVALRDP 105


>gi|297529535|ref|YP_003670810.1| riboflavin biosynthesis protein RibD [Geobacillus sp. C56-T3]
 gi|297252787|gb|ADI26233.1| riboflavin biosynthesis protein RibD [Geobacillus sp. C56-T3]
          Length = 380

 Score = 33.5 bits (75), Expect = 9.2,   Method: Compositional matrix adjust.
 Identities = 23/65 (35%), Positives = 32/65 (49%), Gaps = 11/65 (16%)

Query: 47  LKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYY 100
           LK    HAE+ AIRM     + E      +YVTLEPC+       CA  +  A +RR+  
Sbjct: 45  LKAGEPHAEVYAIRM-----AGEKARGATVYVTLEPCSHYGKTPPCADLLIQAGVRRVVV 99

Query: 101 GASNP 105
             ++P
Sbjct: 100 ATTDP 104


>gi|261417867|ref|YP_003251549.1| riboflavin biosynthesis protein RibD [Geobacillus sp. Y412MC61]
 gi|319767321|ref|YP_004132822.1| riboflavin biosynthesis protein RibD [Geobacillus sp. Y412MC52]
 gi|261374324|gb|ACX77067.1| riboflavin biosynthesis protein RibD [Geobacillus sp. Y412MC61]
 gi|317112187|gb|ADU94679.1| riboflavin biosynthesis protein RibD [Geobacillus sp. Y412MC52]
          Length = 380

 Score = 33.5 bits (75), Expect = 9.2,   Method: Compositional matrix adjust.
 Identities = 23/65 (35%), Positives = 32/65 (49%), Gaps = 11/65 (16%)

Query: 47  LKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYY 100
           LK    HAE+ AIRM     + E      +YVTLEPC+       CA  +  A +RR+  
Sbjct: 45  LKAGEPHAEVYAIRM-----AGEKARGATVYVTLEPCSHYGKTPPCADLLIQAGVRRVVV 99

Query: 101 GASNP 105
             ++P
Sbjct: 100 ATTDP 104


>gi|333030069|ref|ZP_08458130.1| CMP/dCMP deaminase zinc-binding [Bacteroides coprosuis DSM 18011]
 gi|332740666|gb|EGJ71148.1| CMP/dCMP deaminase zinc-binding [Bacteroides coprosuis DSM 18011]
          Length = 146

 Score = 33.5 bits (75), Expect = 9.3,   Method: Compositional matrix adjust.
 Identities = 32/99 (32%), Positives = 40/99 (40%), Gaps = 16/99 (16%)

Query: 26  VGAVAVLNNKIISRAGN------------RNRELKDVTAHAEILAI-RMGCRILSQEILP 72
           VGA+ V +  IIS   N             N   K    HAE  AI ++ C   S     
Sbjct: 36  VGALIVKDKMIISDGYNGTPSGFENICEDDNNTTKPYVLHAEANAITKIAC---SNNSSD 92

Query: 73  EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIE 111
              +YVT  PC  CA  I  A I+R+ Y  S     GI+
Sbjct: 93  GATMYVTAAPCIECAKLIIQAGIKRVVYSESYRLDDGIQ 131


>gi|164687268|ref|ZP_02211296.1| hypothetical protein CLOBAR_00909 [Clostridium bartlettii DSM
           16795]
 gi|164603692|gb|EDQ97157.1| hypothetical protein CLOBAR_00909 [Clostridium bartlettii DSM
           16795]
          Length = 370

 Score = 33.5 bits (75), Expect = 9.4,   Method: Compositional matrix adjust.
 Identities = 39/152 (25%), Positives = 67/152 (44%), Gaps = 21/152 (13%)

Query: 2   KKGNVFMSCALEEAQ--NAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
           ++ N +M  ALE A+    A+     VG + V + K+I         +K    HAE+ AI
Sbjct: 8   QEDNYYMKKALELAKLGIGAVNPNPLVGCIIVKDGKVIGEG----YHMKFGEPHAEVNAI 63

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENG 113
                  ++E +    +YVTLEPC+       CA  +   +++R+    ++P      NG
Sbjct: 64  NS-----AKEDIEGATVYVTLEPCSHFGKTPPCADNLVRHKVKRVVICNNDPNPLVAGNG 118

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
            +    A      E+  GI E+   ++ + FF
Sbjct: 119 IKKLQNAGI----EVTTGILEEEGLKLNEVFF 146


>gi|56420832|ref|YP_148150.1| riboflavin-specific deaminase [Geobacillus kaustophilus HTA426]
 gi|56380674|dbj|BAD76582.1| riboflavin-specific deaminase
           (diaminohydroxyphosphoribosylaminopyrimidine deaminase ;
           5-amino-6-(5-phosphoribosylamino)uracil reductase )
           [Geobacillus kaustophilus HTA426]
          Length = 380

 Score = 33.5 bits (75), Expect = 9.4,   Method: Compositional matrix adjust.
 Identities = 23/65 (35%), Positives = 32/65 (49%), Gaps = 11/65 (16%)

Query: 47  LKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYY 100
           LK    HAE+ AIRM     + E      +YVTLEPC+       CA  +  A +RR+  
Sbjct: 45  LKAGEPHAEVYAIRM-----AGEKARGATVYVTLEPCSHYGKTPPCADLLIQAGVRRVVV 99

Query: 101 GASNP 105
             ++P
Sbjct: 100 ATTDP 104


>gi|288924860|ref|ZP_06418797.1| cytidine/deoxycytidylate deaminase family protein [Prevotella
           buccae D17]
 gi|315607887|ref|ZP_07882880.1| competence protein ComEB [Prevotella buccae ATCC 33574]
 gi|288338647|gb|EFC76996.1| cytidine/deoxycytidylate deaminase family protein [Prevotella
           buccae D17]
 gi|315250356|gb|EFU30352.1| competence protein ComEB [Prevotella buccae ATCC 33574]
          Length = 148

 Score = 33.5 bits (75), Expect = 9.5,   Method: Compositional matrix adjust.
 Identities = 35/106 (33%), Positives = 40/106 (37%), Gaps = 17/106 (16%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGN------------RNRELKDVTAHAE 55
           M+C   E      R    VGA+ V +  IIS   N             N   K    HAE
Sbjct: 18  MACIWSENSYCERR---KVGALVVKDKMIISDGYNGTPSGFENVCEDENHITKPYVLHAE 74

Query: 56  ILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
             AI    R  S        LYVT  PC  CA  I  A I+R+ YG
Sbjct: 75  ANAITKLAR--SSNNSDGSTLYVTASPCIECAKLIIQAGIKRVVYG 118


>gi|220918025|ref|YP_002493329.1| riboflavin biosynthesis protein RibD [Anaeromyxobacter dehalogenans
           2CP-1]
 gi|219955879|gb|ACL66263.1| riboflavin biosynthesis protein RibD [Anaeromyxobacter dehalogenans
           2CP-1]
          Length = 392

 Score = 33.5 bits (75), Expect = 9.5,   Method: Compositional matrix adjust.
 Identities = 15/37 (40%), Positives = 23/37 (62%), Gaps = 6/37 (16%)

Query: 75  DLYVTLEPCTM------CAAAISLARIRRLYYGASNP 105
           D+Y TLEPC        C+ A+  A +RR++ G+S+P
Sbjct: 89  DVYTTLEPCDHFGKTPPCSVALLEAGVRRVFVGSSDP 125


>gi|116753576|ref|YP_842694.1| CMP/dCMP deaminase, zinc-binding [Methanosaeta thermophila PT]
 gi|116665027|gb|ABK14054.1| CMP/dCMP deaminase, zinc-binding protein [Methanosaeta thermophila
           PT]
          Length = 144

 Score = 33.5 bits (75), Expect = 9.5,   Method: Compositional matrix adjust.
 Identities = 33/114 (28%), Positives = 48/114 (42%), Gaps = 21/114 (18%)

Query: 16  QNAALRNEIPVGAVAVLNNKIISR--------------AGNRNRELKDVTAHAEILAIRM 61
           ++  LRN   VGAV V + +I+S               AG    +++  T H    A+  
Sbjct: 20  RSTCLRNR--VGAVIVRDKRILSTGYNGAPTGLEHCDVAGCLREKVESGTRHELCRAVHA 77

Query: 62  GCRILSQEILPEVD-----LYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI 110
               + Q  L  V      LY T +PC +CA  +  ARIRR+ Y    P  G +
Sbjct: 78  EQNAIIQAALHGVSIEGATLYCTHQPCILCAKMMINARIRRVVYRNQYPDEGAL 131


>gi|270308361|ref|YP_003330419.1| riboflavin biosynthesis protein,
           5-amino-6-(5-phosphoribosylamino)uracil reductase,
           diaminohydroxyphosphoribosylaminopyrimidine deaminase
           [Dehalococcoides sp. VS]
 gi|270154253|gb|ACZ62091.1| riboflavin biosynthesis protein,
           5-amino-6-(5-phosphoribosylamino)uracil reductase,
           diaminohydroxyphosphoribosylaminopyrimidine deaminase
           [Dehalococcoides sp. VS]
          Length = 365

 Score = 33.5 bits (75), Expect = 9.6,   Method: Compositional matrix adjust.
 Identities = 44/158 (27%), Positives = 70/158 (44%), Gaps = 41/158 (25%)

Query: 7   FMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           +MS AL  A+ A   +     VGAV V N +++ + G       D   HAEI+A++    
Sbjct: 3   YMSQALSLAKLAIGQVSPNPSVGAVIVKNGEVVGQ-GFTQPPGGD---HAEIVALKQ--- 55

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNP-KGGGIENGTQFYTLATCH 123
             + E      LYVTLEPC  C            + G + P  G  IE+G +   +AT  
Sbjct: 56  --AAEKAKGAALYVTLEPC--C------------HQGRTPPCTGSIIESGIKEVYIATLD 99

Query: 124 HSP---------------EIYPGISEQRSRQIIQDFFK 146
            +P               +++ G+ E+ +RQ+ + +FK
Sbjct: 100 DNPLVSGKGKKELENAGIKVHLGMMEREARQMNEAYFK 137


>gi|145346176|ref|XP_001417569.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144577796|gb|ABO95862.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 147

 Score = 33.5 bits (75), Expect = 9.6,   Method: Compositional matrix adjust.
 Identities = 31/103 (30%), Positives = 42/103 (40%), Gaps = 23/103 (22%)

Query: 53  HAEILAIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPK 106
           HAE+ A+R      + E+      YVTLEPC        CA A+  A + R+  G  +P 
Sbjct: 47  HAEVFALRA-----AGELARGATAYVTLEPCNHYGRTPPCARALVDAGVARVVVGFIDPD 101

Query: 107 ----GGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
               GGGI+               E+  G  E   R+I  DF 
Sbjct: 102 PRVSGGGIQT--------LLDAGIEVAVGCEEALCREINADFI 136


>gi|57234067|ref|YP_181903.1| riboflavin biosynthesis protein RibD [Dehalococcoides ethenogenes
           195]
 gi|57224515|gb|AAW39572.1| riboflavin biosynthesis protein RibD [Dehalococcoides ethenogenes
           195]
          Length = 365

 Score = 33.5 bits (75), Expect = 9.6,   Method: Compositional matrix adjust.
 Identities = 44/150 (29%), Positives = 68/150 (45%), Gaps = 25/150 (16%)

Query: 7   FMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           +MS AL  A+ A   +     VGAV V N +++ + G       D   HAEI+A++    
Sbjct: 3   YMSQALSLAKLAIGQVSPNPAVGAVIVKNGEVVGQ-GFTQPPGGD---HAEIVALKQ--- 55

Query: 65  ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGA--SNPKGGGIENGTQF 116
             + E      LYVTLEPC        C  AI  + I+ +Y      NP   G   G + 
Sbjct: 56  --AAEKAKGAALYVTLEPCCHQGRTPPCTVAIIESGIKEVYIATLDDNPLVSG--KGKKE 111

Query: 117 YTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
              A      +++ G+ E+ +RQ+ + +FK
Sbjct: 112 LEDAGI----KVHLGMMEREARQMNEAYFK 137


>gi|197119395|ref|YP_002139822.1| bifunctional
           2,
           5-diamino-6-(5'-phosphoribosylamino)-4-(3H)-pyrimidinone
           deaminase/5-amino-6-(5'-phosphoribosylamino)uracil
           reductase [Geobacter bemidjiensis Bem]
 gi|197088755|gb|ACH40026.1| 2,5-diamino-6-(5'-phosphoribosylamino)-4-(3H)-pyrimidinone
           deaminase and 5-amino-6-(5'-phosphoribosylamino)uracil
           reductase [Geobacter bemidjiensis Bem]
          Length = 369

 Score = 33.5 bits (75), Expect = 9.8,   Method: Compositional matrix adjust.
 Identities = 39/148 (26%), Positives = 66/148 (44%), Gaps = 21/148 (14%)

Query: 7   FMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
            M  AL EA+    +      VG V V N +++    ++    K  T HAE+ A++    
Sbjct: 8   MMRLALAEARKGIGKTAPNPAVGCVIVRNGEVVGTGWHK----KAGTPHAEVHALKA--- 60

Query: 65  ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
             + +     D YVTLEPC+       CA A+  AR+ R++    +P    + +G     
Sbjct: 61  --AGDKAAGADAYVTLEPCSHFGKTPPCAKALIEARVARVFVAMVDPN--PLVSGRGIQM 116

Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFK 146
           L     + E+  G+ ++ SR++   F K
Sbjct: 117 LKDAGIAVEV--GLLKEESRELNLPFIK 142


>gi|225555471|gb|EEH03763.1| conserved hypothetical protein [Ajellomyces capsulatus G186AR]
          Length = 486

 Score = 33.5 bits (75), Expect = 9.9,   Method: Compositional matrix adjust.
 Identities = 13/27 (48%), Positives = 18/27 (66%)

Query: 74  VDLYVTLEPCTMCAAAISLARIRRLYY 100
           +DLY+T EPC  CA  + L+R R + Y
Sbjct: 404 LDLYITHEPCVCCAMGMLLSRFRAVVY 430


>gi|189502659|ref|YP_001958376.1| hypothetical protein Aasi_1340 [Candidatus Amoebophilus asiaticus
           5a2]
 gi|189498100|gb|ACE06647.1| hypothetical protein Aasi_1340 [Candidatus Amoebophilus asiaticus
           5a2]
          Length = 160

 Score = 33.5 bits (75), Expect = 9.9,   Method: Compositional matrix adjust.
 Identities = 39/134 (29%), Positives = 60/134 (44%), Gaps = 25/134 (18%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIIS------RAGNRN-----------REL 47
           ++F+  AL+ A+ +    ++ VGAV   + +IIS       +G  N           R++
Sbjct: 8   DIFIQLALQLAKRSHCV-KLQVGAVLAKDTRIISIGYNGPPSGTYNCDEQWPGIGCPRDV 66

Query: 48  K---DVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASN 104
           K    +  HAE  AI     + +Q  +    LY+TL PC  CA  I    I+R+ Y  S 
Sbjct: 67  KGGCSLAIHAEQNAILYA--LSNQAAVTGATLYITLSPCLPCARIIFTVGIKRVVYVQSY 124

Query: 105 P--KGGGIENGTQF 116
              KG   E G +F
Sbjct: 125 AAYKGLSKEEGLEF 138


>gi|328954436|ref|YP_004371770.1| CMP/dCMP deaminase zinc-binding protein [Desulfobacca acetoxidans
           DSM 11109]
 gi|328454760|gb|AEB10589.1| CMP/dCMP deaminase zinc-binding protein [Desulfobacca acetoxidans
           DSM 11109]
          Length = 186

 Score = 33.5 bits (75), Expect = 9.9,   Method: Compositional matrix adjust.
 Identities = 13/25 (52%), Positives = 19/25 (76%)

Query: 76  LYVTLEPCTMCAAAISLARIRRLYY 100
           LYVTLEPC +C   ++ A+I R+Y+
Sbjct: 105 LYVTLEPCYVCLKLLATAQIDRVYF 129


Searching..................................................done


Results from round 2




>gi|314937113|ref|ZP_07844460.1| cytidine/deoxycytidylate deaminase family protein [Staphylococcus
           hominis subsp. hominis C80]
 gi|313655732|gb|EFS19477.1| cytidine/deoxycytidylate deaminase family protein [Staphylococcus
           hominis subsp. hominis C80]
          Length = 163

 Score =  239 bits (611), Expect = 9e-62,   Method: Composition-based stats.
 Identities = 58/149 (38%), Positives = 85/149 (57%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M     +M CA+EEA+ A    E+P+GAV V +N+IISRA N    L+  TAHAE LAI 
Sbjct: 1   MTNDEFYMKCAIEEAKKARQLGEVPIGAVIVKDNEIISRAHNLRETLQQPTAHAEHLAIE 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              +++    L +  LYVTLEPC MCA  + ++RI R+ YGA +PKGG   +        
Sbjct: 61  RAAKVIGSWRLEDCTLYVTLEPCVMCAGTVVMSRIPRVVYGAMDPKGGCSGSLMDLLQQP 120

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H   +  G+ E+    +++ FF++ R
Sbjct: 121 QFNHRAIVEQGVLEEECSNLLRQFFRDLR 149


>gi|251794142|ref|YP_003008873.1| CMP/dCMP deaminase zinc-binding [Paenibacillus sp. JDR-2]
 gi|247541768|gb|ACS98786.1| CMP/dCMP deaminase zinc-binding [Paenibacillus sp. JDR-2]
          Length = 156

 Score =  239 bits (610), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 52/148 (35%), Positives = 80/148 (54%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           ++   +M  A+EEA+ A    E+P+GA+ V N +++ R  N      D TAHAE++AIR 
Sbjct: 5   QEDQAWMQLAIEEAKKAEQIGEVPIGAILVKNGEVVGRGYNLRETNHDPTAHAEMVAIRE 64

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
            C  L    L +  LYVTLEPC MCA AI  +R++R+ YG  +PK G             
Sbjct: 65  ACERLGAWRLLDCTLYVTLEPCPMCAGAIVQSRVKRVVYGTGDPKAGCAGTLMNLLQEPR 124

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H  E+  G+ +    +++ +FF+  R
Sbjct: 125 FNHETELTSGVLQAECAELLTNFFRNLR 152


>gi|212637865|ref|YP_002314385.1| cytosine/adenosine deaminase [Anoxybacillus flavithermus WK1]
 gi|212559345|gb|ACJ32400.1| Cytosine/adenosine deaminase [Anoxybacillus flavithermus WK1]
          Length = 177

 Score =  237 bits (606), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 60/149 (40%), Positives = 87/149 (58%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           MK    +M  A+EEA+ A    E+P+GAV V N+++I+RA N     +   AHAE+LAI 
Sbjct: 16  MKNDEYYMHLAIEEAKKAEKIGEVPIGAVIVYNDQVIARAHNLRERDQRSIAHAELLAID 75

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
             C+ L    L +  LYVTLEPC MCA AI L+RI+R+ +GAS+PKGG            
Sbjct: 76  EACKKLGTWRLEQATLYVTLEPCAMCAGAIVLSRIKRVVFGASDPKGGCAGTLMNLLQEP 135

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  E+  GI  ++   ++ +FF++ R
Sbjct: 136 RFNHQVEVVSGILGEQCGNMLSEFFRQLR 164


>gi|223983492|ref|ZP_03633678.1| hypothetical protein HOLDEFILI_00958 [Holdemania filiformis DSM
           12042]
 gi|223964664|gb|EEF68990.1| hypothetical protein HOLDEFILI_00958 [Holdemania filiformis DSM
           12042]
          Length = 181

 Score =  236 bits (604), Expect = 7e-61,   Method: Composition-based stats.
 Identities = 58/148 (39%), Positives = 86/148 (58%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           K    FM  A++EA+ A   +E+P+GAV V + KI++R  N   + +   AHAEI+AI  
Sbjct: 8   KNDEYFMRQAIKEARKAEALDEVPIGAVLVHDGKILARGHNLREKKQSSLAHAEIVAIEK 67

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
            CR      L +  LYVTLEPC MCA AI  +RI ++ YGA++PKGG +      Y +  
Sbjct: 68  ACRKTGSWRLEDCVLYVTLEPCPMCAGAILQSRIAKVVYGAADPKGGSVGTCFNLYDIPG 127

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H PE+  G+       +++ FFK++R
Sbjct: 128 FNHYPEVLGGVLSVDCAMLLKTFFKQKR 155


>gi|228475284|ref|ZP_04060009.1| tRNA-specific adenosine deaminase [Staphylococcus hominis SK119]
 gi|228270749|gb|EEK12158.1| tRNA-specific adenosine deaminase [Staphylococcus hominis SK119]
          Length = 162

 Score =  236 bits (604), Expect = 7e-61,   Method: Composition-based stats.
 Identities = 58/149 (38%), Positives = 84/149 (56%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M     +M CA+EEA+ A    E+P+GAV V +N IISRA N    L+  TAHAE LAI 
Sbjct: 1   MTNDEFYMKCAIEEAKKARQLGEVPIGAVIVKDNDIISRAHNLRETLQQPTAHAEHLAIE 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              +++    L +  LYVTLEPC MCA  + ++RI R+ YGA +PKGG   +        
Sbjct: 61  RAAKVIGSWRLEDCTLYVTLEPCVMCAGTVVMSRIPRVVYGAMDPKGGCSGSLMDLLQQP 120

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H   +  G+ E+    +++ FF++ R
Sbjct: 121 QFNHHAIVEQGVLEEECSNLLRQFFRDLR 149


>gi|310639569|ref|YP_003944327.1| cmp/dcmp deaminase zinc-binding protein [Paenibacillus polymyxa
           SC2]
 gi|309244519|gb|ADO54086.1| CMP/dCMP deaminase zinc-binding protein [Paenibacillus polymyxa
           SC2]
          Length = 165

 Score =  236 bits (603), Expect = 8e-61,   Method: Composition-based stats.
 Identities = 53/149 (35%), Positives = 78/149 (52%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +     +M  A++EA  A    E+P+GAV V +N+II R  N      D TAHAE++AIR
Sbjct: 3   IMDHAYWMREAIQEAYKAEALGEVPIGAVIVKDNEIIGRGYNLRETDTDPTAHAEMVAIR 62

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
                L    L +  LYVTLEPC MCA AI  +R+  L YG ++PK G            
Sbjct: 63  QASEHLGAWRLLDCRLYVTLEPCPMCAGAIVQSRVPHLIYGTTDPKAGCAGTLMNLLQEP 122

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  E+  G+ ++    ++ +FF++ R
Sbjct: 123 RFNHCTEVTSGVLQEECASMLTNFFRQLR 151


>gi|226309631|ref|YP_002769525.1| tRNA specific adenosine deaminase [Brevibacillus brevis NBRC
           100599]
 gi|226092579|dbj|BAH41021.1| putative tRNA specific adenosine deaminase [Brevibacillus brevis
           NBRC 100599]
          Length = 160

 Score =  236 bits (603), Expect = 8e-61,   Method: Composition-based stats.
 Identities = 54/148 (36%), Positives = 79/148 (53%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
            + + +M  A+EEA+ AA   E+P+GAV V + +I+ R  N     KD T HAE++AIR 
Sbjct: 5   NEHDYYMKQAMEEARKAAAIGEVPIGAVIVRDGEIVGRGYNLRETQKDPTLHAELIAIRE 64

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
               L    L    LYVTLEPC MCA AI  +RI ++ YGA +PK G             
Sbjct: 65  ASERLGGWRLIGCTLYVTLEPCPMCAGAIVQSRIEKVVYGARDPKAGCAGTLMNLLAEPR 124

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H   +  G+  +   Q++++FF+  R
Sbjct: 125 FNHQVPVIEGVLAEECGQMLKEFFRGLR 152


>gi|242372784|ref|ZP_04818358.1| deaminase [Staphylococcus epidermidis M23864:W1]
 gi|242349557|gb|EES41158.1| deaminase [Staphylococcus epidermidis M23864:W1]
          Length = 168

 Score =  236 bits (603), Expect = 8e-61,   Method: Composition-based stats.
 Identities = 58/149 (38%), Positives = 84/149 (56%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M+  N +M  A++EA+ A    E+P+GAV V +N +I+RA N    L+  TAHAE +AI 
Sbjct: 1   MRTDNDYMRLAIKEARKAQELGEVPIGAVIVKDNHVIARAHNLRETLQQPTAHAEHIAIE 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
               ++    L +  LYVTLEPC MCA AI ++RI R+ YGA +PKGG   +        
Sbjct: 61  RASEVIGSWRLEDCTLYVTLEPCVMCAGAIVMSRIPRVVYGAIDPKGGCTGSLMNLLAQP 120

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H   +  GI E     ++++FFK  R
Sbjct: 121 QFNHRAIVESGILENECSTLLREFFKNIR 149


>gi|220932912|ref|YP_002509820.1| tRNA-adenosine deaminase [Halothermothrix orenii H 168]
 gi|219994222|gb|ACL70825.1| tRNA-adenosine deaminase [Halothermothrix orenii H 168]
          Length = 159

 Score =  236 bits (603), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 67/149 (44%), Positives = 84/149 (56%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           MK    FM  ALEEA+ A    E+P+GAV V N +I+    N      D TAHAEI+AIR
Sbjct: 1   MKTDEDFMELALEEARKALALEEVPIGAVVVCNGEIVGSGHNLKETENDPTAHAEIVAIR 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              R LS   L E  LYVT+EPC MCA AI  AR++R+ YGA +PK G   +        
Sbjct: 61  DAARKLSSWRLNECQLYVTIEPCPMCAGAIMQARLQRVVYGAVDPKAGVAGSLYNLLQDN 120

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H+ E+  G+     RQII+DFF E R
Sbjct: 121 RFNHTVELKSGVLAAECRQIIKDFFSELR 149


>gi|70727433|ref|YP_254349.1| hypothetical protein SH2434 [Staphylococcus haemolyticus JCSC1435]
 gi|68448159|dbj|BAE05743.1| unnamed protein product [Staphylococcus haemolyticus JCSC1435]
          Length = 157

 Score =  235 bits (602), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 58/149 (38%), Positives = 86/149 (57%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M     +M  A+EEA+ A    E+P+GA+ V NN++I+ A N     +  TAHAE +AI 
Sbjct: 1   MANDEYYMKLAIEEAKKAQKLGEVPIGAIIVKNNEVIASAHNLRETAQLPTAHAEHIAIE 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              ++L    L    LYVTLEPC MCA AI ++RI ++ YGA++PKGG   +       +
Sbjct: 61  RASKVLGSWRLEGCTLYVTLEPCVMCAGAIVMSRIPKVVYGATDPKGGCSGSLMNLLEES 120

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  EI  G+ EQ    ++++FF+E R
Sbjct: 121 QFNHRAEIVKGVLEQECGDLLRNFFRELR 149


>gi|302390668|ref|YP_003826489.1| tRNA-adenosine deaminase [Thermosediminibacter oceani DSM 16646]
 gi|302201296|gb|ADL08866.1| tRNA-adenosine deaminase [Thermosediminibacter oceani DSM 16646]
          Length = 152

 Score =  235 bits (602), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 60/148 (40%), Positives = 87/148 (58%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           K    FM  AL+EA+ A  ++E+PVGAV      II+RA N     +D TAHAE+LAI+ 
Sbjct: 4   KDHEFFMREALKEARKAFEQDEVPVGAVIAYEGSIIARAHNLRERSQDATAHAEVLAIKA 63

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
            C  +    L    LYVTLEPC MCA AI LAR+ R+ +GA +PK G   +    + +  
Sbjct: 64  ACEAMGTWRLTGCSLYVTLEPCPMCAGAIILARLDRVVFGAPDPKAGAAGSVVDLFKVER 123

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H PE+  G+  +    +++DFF+++R
Sbjct: 124 FNHHPEVVSGVLAEECGILLKDFFRQKR 151


>gi|224475714|ref|YP_002633320.1| putative deaminase [Staphylococcus carnosus subsp. carnosus TM300]
 gi|222420321|emb|CAL27135.1| putative deaminase [Staphylococcus carnosus subsp. carnosus TM300]
          Length = 159

 Score =  235 bits (601), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 57/149 (38%), Positives = 82/149 (55%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M     +M  ALEEA+ A    E+P+GA+ V   ++I+RA N    ++  TAHAE +AI 
Sbjct: 1   MATDENYMKLALEEAKKAERIGEVPIGAIVVKEGEVIARAHNLRETVQQPTAHAEHIAIE 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
                +    L +  LYVTLEPC MC+ AI ++RI R+ YGAS+PKGG   +        
Sbjct: 61  KAAEAVGSWRLEDCTLYVTLEPCVMCSGAIVMSRIPRVVYGASDPKGGCSGSLMDLLQEP 120

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  E+  G+ E     I++ FFK+ R
Sbjct: 121 RFNHRAEVVSGVLENECGAILKSFFKQLR 149


>gi|78043781|ref|YP_361468.1| cytidine/deoxycytidylate deaminase family protein [Carboxydothermus
           hydrogenoformans Z-2901]
 gi|77995896|gb|ABB14795.1| cytidine/deoxycytidylate deaminase family protein [Carboxydothermus
           hydrogenoformans Z-2901]
          Length = 153

 Score =  235 bits (600), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 62/147 (42%), Positives = 84/147 (57%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
               FM+ AL+EA+ AAL+ E+PVGAV V N +II R  N      D TAHAEI+A++  
Sbjct: 2   DHEKFMAEALKEAEKAALQGEVPVGAVVVYNGEIIGRGHNLRETFSDPTAHAEIVALKEA 61

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
              L    L +  LYVT+EPC MCA AI  ARI+ L YGA + K G ++           
Sbjct: 62  ASKLKNWQLKDCTLYVTVEPCPMCAGAIYQARIKTLVYGAPDLKAGAVDTLFDLVRNPRL 121

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H  E+  G+    + +II DFF+E+R
Sbjct: 122 NHRVEVISGVLAAEASKIITDFFREKR 148


>gi|309390267|gb|ADO78147.1| tRNA-adenosine deaminase [Halanaerobium praevalens DSM 2228]
          Length = 154

 Score =  235 bits (600), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 62/149 (41%), Positives = 89/149 (59%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M+    +M  AL EA+ A  R E+P+GAV V N++++ R  N   + +D T HAEI+A+R
Sbjct: 1   MENDIKYMKMALAEARKAYQRAEVPIGAVVVCNDQVVGRGFNLREQTQDPTTHAEIIALR 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
                     L +  LYVTLEPC MCA AI  +RI+RL YGAS+PK G + +  Q     
Sbjct: 61  EAASNKVSWRLEDCQLYVTLEPCPMCAGAILQSRIKRLVYGASDPKAGAVRSLYQLLDDN 120

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  ++  GI E+ S Q+++DFF+E R
Sbjct: 121 RFNHQVKVEAGIMEKESAQLLKDFFRELR 149


>gi|226328060|ref|ZP_03803578.1| hypothetical protein PROPEN_01951 [Proteus penneri ATCC 35198]
 gi|225203764|gb|EEG86118.1| hypothetical protein PROPEN_01951 [Proteus penneri ATCC 35198]
          Length = 176

 Score =  234 bits (598), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 61/148 (41%), Positives = 85/148 (57%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           K    +M  A+E+A  A    EIPVGAV V++NKII++  N +    D TAHAEI+A+R 
Sbjct: 5   KDDIYWMHKAIEQAHKAQEIGEIPVGAVLVVDNKIIAKGWNHSIIDNDPTAHAEIMALRK 64

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
           G + L    L +  LY+TLEPC MCA AI  +R++R+ YGAS+ K G   +         
Sbjct: 65  GGKHLQNYRLLDATLYITLEPCVMCAGAIVHSRVKRVVYGASDLKTGAAGSFIDILQHPG 124

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H  EI  G+  +   Q++  FFK RR
Sbjct: 125 MNHKVEITSGVLGEECSQLLSQFFKMRR 152


>gi|303243154|ref|ZP_07329591.1| CMP/dCMP deaminase zinc-binding [Acetivibrio cellulolyticus CD2]
 gi|302589304|gb|EFL59115.1| CMP/dCMP deaminase zinc-binding [Acetivibrio cellulolyticus CD2]
          Length = 154

 Score =  234 bits (598), Expect = 4e-60,   Method: Composition-based stats.
 Identities = 64/149 (42%), Positives = 89/149 (59%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M++G +FM  AL+EA+ A  ++E PVGAV V +  IISR  N      D T HAEI AI+
Sbjct: 1   MEQGYLFMKEALKEAKKAYKKDETPVGAVIVKDGVIISRGHNEKEMKNDPTLHAEISAIK 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
             C+ L+   L + DLYVTLEPC MCA AI  AR+ RL+ G  +PK G + +      + 
Sbjct: 61  KACKKLNTWRLNDCDLYVTLEPCAMCAGAIIQARVGRLFIGTPDPKAGAVGSVVDILGVE 120

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  E++ G+  +    I++DFFKE R
Sbjct: 121 KFNHKVEVFYGLLMEECSMILKDFFKELR 149


>gi|227356250|ref|ZP_03840639.1| tRNA-specific adenosine deaminase [Proteus mirabilis ATCC 29906]
 gi|227163714|gb|EEI48630.1| tRNA-specific adenosine deaminase [Proteus mirabilis ATCC 29906]
          Length = 176

 Score =  234 bits (597), Expect = 4e-60,   Method: Composition-based stats.
 Identities = 61/149 (40%), Positives = 85/149 (57%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +K    +M  A+E+A  A    EIPVGAV V +NKII++  N +    D TAHAEI+A+R
Sbjct: 4   IKDDIYWMHKAIEQAHKAQQLGEIPVGAVLVADNKIIAKGWNHSIIDNDPTAHAEIMALR 63

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
            G + L    L +  LY+TLEPC MCA AI  +R++R+ YGAS+ K G   +        
Sbjct: 64  KGGKHLQNYRLLDATLYITLEPCVMCAGAIVHSRVKRVVYGASDLKTGAAGSFIDILQHP 123

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  EI  G+  +   Q++  FFK RR
Sbjct: 124 GMNHKVEITSGVLGEECAQLLSQFFKMRR 152


>gi|317126762|ref|YP_004093044.1| CMP/dCMP deaminase zinc-binding protein [Bacillus cellulosilyticus
           DSM 2522]
 gi|315471710|gb|ADU28313.1| CMP/dCMP deaminase zinc-binding protein [Bacillus cellulosilyticus
           DSM 2522]
          Length = 161

 Score =  234 bits (597), Expect = 4e-60,   Method: Composition-based stats.
 Identities = 57/148 (38%), Positives = 87/148 (58%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           K+   FM  AL EA+ A    E+P+GA+ V +N II+R  N   + + VT HAE++AI+ 
Sbjct: 7   KEDIFFMEQALVEAEKAMEIGEVPIGAIIVRDNVIIARGHNLREQQQMVTNHAELIAIQK 66

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
            C  +    L +  LYVTLEPC MCA AI  +R++R+ YGA++PK G   +         
Sbjct: 67  ACEEVGSWRLEDCTLYVTLEPCPMCAGAIVQSRMKRVVYGAADPKAGCCGSLMNLLDEPR 126

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H   +  G+ E+ S ++++DFFK+ R
Sbjct: 127 LNHQVYVTSGLYEEESSRLLKDFFKKLR 154


>gi|296123852|ref|YP_003631630.1| CMP/dCMP deaminase zinc-binding protein [Planctomyces limnophilus
           DSM 3776]
 gi|296016192|gb|ADG69431.1| CMP/dCMP deaminase zinc-binding protein [Planctomyces limnophilus
           DSM 3776]
          Length = 166

 Score =  234 bits (597), Expect = 4e-60,   Method: Composition-based stats.
 Identities = 60/149 (40%), Positives = 88/149 (59%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           ++  + +M  AL+ AQ A    E+P+GAV V +++II  A N+  +LKD TAHAEI+AI 
Sbjct: 13  LQPHDRWMRQALDLAQQAFAEEEVPIGAVIVKDDQIIGAAWNQREQLKDPTAHAEIVAIT 72

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
               ++    L +  LYVTLEPC MCA AI  ARI R+ YG ++PK G      Q    A
Sbjct: 73  QAAEVIGDWRLEDCTLYVTLEPCPMCAGAIVQARIPRVVYGITDPKAGACHTLYQITDDA 132

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H   +  G+  Q  ++I+Q+FF+ +R
Sbjct: 133 RLNHRCAVLGGVLAQECKEILQEFFRLQR 161


>gi|223043054|ref|ZP_03613102.1| tRNA-specific adenosine deaminase [Staphylococcus capitis SK14]
 gi|222443908|gb|EEE50005.1| tRNA-specific adenosine deaminase [Staphylococcus capitis SK14]
          Length = 168

 Score =  233 bits (596), Expect = 5e-60,   Method: Composition-based stats.
 Identities = 60/149 (40%), Positives = 84/149 (56%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M+    +M  A++EAQ A    E+P+GAV V NN++I+ A N    L+  TAHAE +AI 
Sbjct: 1   MRTDKDYMRLAIKEAQKAQALGEVPIGAVIVKNNQVIAHAHNLRESLQLPTAHAEHIAIE 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              +++    L E  LYVTLEPC MCA AI ++RI R+ YGA +PKGG   +        
Sbjct: 61  RASKVVGSWRLEECTLYVTLEPCVMCAGAIVMSRIPRVVYGAVDPKGGCTGSLMNLLEQP 120

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H   +  GI E     +++DFFK  R
Sbjct: 121 QFNHRAIVESGILENECSTLLRDFFKNIR 149


>gi|152981408|ref|YP_001353698.1| hypothetical protein mma_2008 [Janthinobacterium sp. Marseille]
 gi|151281485|gb|ABR89895.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille]
          Length = 159

 Score =  233 bits (596), Expect = 6e-60,   Method: Composition-based stats.
 Identities = 55/147 (37%), Positives = 84/147 (57%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
           +  +FM  AL++A+NA    E+PVGAV V + ++I+   N+     D TAHAEI+A+R  
Sbjct: 2   QDAIFMRQALDQARNAWTLGEVPVGAVVVKDGEVIATGFNQPIGTHDPTAHAEIMALRAA 61

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
             IL    LP  +L+VTLEPC MC+ A+  AR+ R+ +GA +PK G   +    +     
Sbjct: 62  ASILGNYRLPGCELFVTLEPCVMCSGAMMHARLARVVFGAPDPKTGACGSVVNLFEQNQL 121

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H  +   G+       +++DFF ERR
Sbjct: 122 NHHTQFIGGVLADECSALLKDFFAERR 148


>gi|27467245|ref|NP_763882.1| Cu binding protein (Mn oxidation [Staphylococcus epidermidis ATCC
           12228]
 gi|27314788|gb|AAO03924.1|AE016745_23 Cu binding protein (Mn oxidation [Staphylococcus epidermidis ATCC
           12228]
 gi|329734672|gb|EGG70979.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Staphylococcus epidermidis VCU028]
          Length = 168

 Score =  233 bits (596), Expect = 6e-60,   Method: Composition-based stats.
 Identities = 58/149 (38%), Positives = 84/149 (56%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           MKK + +M  A+ EA  A    E+P+GAV V   ++I+RA N    L+  TAHAE +AI 
Sbjct: 1   MKKNHDYMRLAINEAHKAKALGEVPIGAVIVKEGQVIARAHNLRETLQQPTAHAEHIAIE 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
               ++    L E  LYVTLEPC MCA  I ++RI ++ YGA++PKGG   +        
Sbjct: 61  RASEVVGSWRLEECTLYVTLEPCVMCAGTIIMSRIPKVVYGATDPKGGCSGSLMNLLEQP 120

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H   +  GI E+   ++++ FFKE R
Sbjct: 121 QFNHRATVEKGILEEECAELLRSFFKEIR 149


>gi|229159196|ref|ZP_04287222.1| hypothetical protein bcere0009_110 [Bacillus cereus R309803]
 gi|228624277|gb|EEK81077.1| hypothetical protein bcere0009_110 [Bacillus cereus R309803]
          Length = 166

 Score =  233 bits (596), Expect = 6e-60,   Method: Composition-based stats.
 Identities = 62/151 (41%), Positives = 87/151 (57%), Gaps = 2/151 (1%)

Query: 1   MKKGN--VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           M++     FM  A+EEAQ A    E+P+GAV VL+ ++IS A N     +   AHAE+LA
Sbjct: 1   MEQDQDIYFMQLAIEEAQKAEEIQEVPIGAVIVLDGEVISSAHNLRETEQRSIAHAELLA 60

Query: 59  IRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
           I   C+ L    L +  LYVTLEPC MCA  I L+R++R+ YGAS+PKGG         T
Sbjct: 61  IDEACKKLGTWRLEDATLYVTLEPCPMCAGGIVLSRVKRVVYGASDPKGGCAGTLMNLLT 120

Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
               +H  E+  G+ E+    ++ +FF+E R
Sbjct: 121 DERFNHQCEVVTGVLEEECGTLLTNFFRELR 151


>gi|229009532|ref|ZP_04166761.1| hypothetical protein bmyco0001_110 [Bacillus mycoides DSM 2048]
 gi|229131029|ref|ZP_04259944.1| hypothetical protein bcere0014_100 [Bacillus cereus BDRD-ST196]
 gi|228652424|gb|EEL08346.1| hypothetical protein bcere0014_100 [Bacillus cereus BDRD-ST196]
 gi|228751743|gb|EEM01540.1| hypothetical protein bmyco0001_110 [Bacillus mycoides DSM 2048]
          Length = 164

 Score =  233 bits (596), Expect = 6e-60,   Method: Composition-based stats.
 Identities = 63/149 (42%), Positives = 87/149 (58%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M++   FM  A+EEA+ A    E+P+GAV VL+ ++IS A N     +   AHAE+LAI 
Sbjct: 1   MERDIYFMQLAIEEAKKAEAIQEVPIGAVIVLDGEVISVAHNLRETEQRSIAHAELLAID 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
             C+ L    L +  LYVTLEPC MCA  I L+RI+R+ YGAS+PKGG         T  
Sbjct: 61  EACKKLGTWRLEDATLYVTLEPCPMCAGGIVLSRIKRVVYGASDPKGGCAGTLMNLLTDE 120

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  E+ PG+ E+    ++  FF+E R
Sbjct: 121 RFNHQCEVVPGVLEEECGTLLTIFFRELR 149


>gi|158319077|ref|YP_001511584.1| CMP/dCMP deaminase zinc-binding [Alkaliphilus oremlandii OhILAs]
 gi|158139276|gb|ABW17588.1| CMP/dCMP deaminase zinc-binding [Alkaliphilus oremlandii OhILAs]
          Length = 154

 Score =  233 bits (596), Expect = 6e-60,   Method: Composition-based stats.
 Identities = 57/149 (38%), Positives = 85/149 (57%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M     FM  A+EEA+ A  + E+P+GAV V +N+II R  N     K+  +HAEI+AI+
Sbjct: 1   MVLEENFMLEAIEEAKKAFNKKEVPIGAVVVKDNEIIGRGHNLRETTKNSISHAEIMAIQ 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
             C+ L    L +  LYVT+EPC MCA AI  +RI+++  GA +PK G   +       +
Sbjct: 61  EACKFLGGWRLTDCTLYVTIEPCPMCAGAILQSRIQKVVIGAMDPKAGACGSLVNLLNDS 120

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  EI  G+ E+    ++++FFK  R
Sbjct: 121 RFNHQTEIEQGVLEEECSLLMKEFFKALR 149


>gi|206889673|ref|YP_002249189.1| cytosine deaminase [Thermodesulfovibrio yellowstonii DSM 11347]
 gi|206741611|gb|ACI20668.1| cytosine deaminase [Thermodesulfovibrio yellowstonii DSM 11347]
          Length = 154

 Score =  233 bits (595), Expect = 6e-60,   Method: Composition-based stats.
 Identities = 69/146 (47%), Positives = 88/146 (60%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
              FM  AL+EA+ A  + EIPVGA+ V+N +IIS+A N      D TAHAEILAIR   
Sbjct: 7   DEYFMKEALKEAEKAYEKGEIPVGALIVVNGEIISKAHNIKETTFDPTAHAEILAIREAA 66

Query: 64  RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123
           RIL    L +  LYVT EPC MC+ AI  +RI+RL YG ++PKGG + +          +
Sbjct: 67  RILGAWRLTDATLYVTKEPCIMCSGAIVNSRIKRLVYGCNDPKGGAVVSLYNILNDKRLN 126

Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149
           H  EI  GI E+  R I++ FFKE R
Sbjct: 127 HQVEITNGILEEECRVILKRFFKELR 152


>gi|329729486|gb|EGG65889.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Staphylococcus epidermidis VCU144]
          Length = 168

 Score =  233 bits (595), Expect = 7e-60,   Method: Composition-based stats.
 Identities = 58/149 (38%), Positives = 84/149 (56%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           MKK + +M  A+ EA  A    E+P+GAV V   ++I+RA N    L+  TAHAE +AI 
Sbjct: 1   MKKNHDYMRLAINEAHKAKALGEVPIGAVIVKEGQVIARAHNLRETLQQPTAHAEHIAIE 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
               ++    L E  LYVTLEPC MCA  I ++RI ++ YGA++PKGG   +        
Sbjct: 61  RASEVVGSWRLEECTLYVTLEPCVMCAGTIIMSRIPKVVYGATDPKGGCSGSLMNLLEQP 120

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H   +  GI E+   ++++ FFKE R
Sbjct: 121 QFNHRATVEKGILEEECAELLRSFFKEIR 149


>gi|332800258|ref|YP_004461757.1| CMP/dCMP deaminase zinc-binding protein [Tepidanaerobacter sp. Re1]
 gi|332697993|gb|AEE92450.1| CMP/dCMP deaminase zinc-binding protein [Tepidanaerobacter sp. Re1]
          Length = 160

 Score =  233 bits (595), Expect = 7e-60,   Method: Composition-based stats.
 Identities = 62/148 (41%), Positives = 88/148 (59%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           K    FM  A++EA+ A   +E+P+GAV V  +++I+RA N    L+D TAHAE+LAIR 
Sbjct: 8   KDDFFFMRQAIQEAKRAMEIDEVPIGAVIVKADEVIARAHNLRETLQDATAHAELLAIRK 67

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
            C +L    L    LYVTLEPC MCA A+ L+R+ RL +GA +PKGG   +         
Sbjct: 68  ACEVLGTWRLEGCTLYVTLEPCPMCAGAVILSRVDRLVFGAKDPKGGACGSLMNLPADER 127

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H P+I  GI       I++ FF+++R
Sbjct: 128 FNHRPKIAAGIMADECGNILKKFFQDKR 155


>gi|228918972|ref|ZP_04082353.1| hypothetical protein bthur0011_100 [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
 gi|228840687|gb|EEM85947.1| hypothetical protein bthur0011_100 [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
          Length = 166

 Score =  233 bits (595), Expect = 8e-60,   Method: Composition-based stats.
 Identities = 62/151 (41%), Positives = 87/151 (57%), Gaps = 2/151 (1%)

Query: 1   MKKGN--VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           MK+     FM  A+EEA+ A    E+P+GAV VL+ ++IS A N     +   AHAE+LA
Sbjct: 1   MKQDQDIYFMQLAIEEAKKAEEIQEVPIGAVIVLDGEVISVAHNLRETEQRSIAHAELLA 60

Query: 59  IRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
           I   C+ L    L +  LYVTLEPC MCA  I L+R++R+ YGAS+PKGG         T
Sbjct: 61  IDEACKKLGTWRLEDATLYVTLEPCPMCAGGIVLSRVKRVVYGASDPKGGCAGTLMNLLT 120

Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
               +H  E+  G+ E+    ++ +FF+E R
Sbjct: 121 DERFNHQCEVVSGVLEEECGTLLTNFFRELR 151


>gi|134094605|ref|YP_001099680.1| tRNA-specific adenosine deaminase [Herminiimonas arsenicoxydans]
 gi|133738508|emb|CAL61553.1| tRNA-specific adenosine deaminase [Herminiimonas arsenicoxydans]
          Length = 170

 Score =  232 bits (594), Expect = 9e-60,   Method: Composition-based stats.
 Identities = 57/148 (38%), Positives = 86/148 (58%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
            +  ++M  AL++A NA    E+PVGAV V + ++I+   N+     D TAHAEI+A+R 
Sbjct: 9   TQDEIWMRQALDQAHNAWALGEVPVGAVVVKDGQVIATGFNQPIGTHDPTAHAEIMALRA 68

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
              IL    LP  +LYVTLEPC MC+ A+  AR+ R+ +GAS+PK G   +    +    
Sbjct: 69  AATILGNYRLPGCELYVTLEPCVMCSGAMMHARLARVVFGASDPKTGACGSIVNLFEQNQ 128

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H  ++  G+  Q    +++DFF ERR
Sbjct: 129 LNHHTQLTGGLMAQECGALLKDFFAERR 156


>gi|229039926|ref|ZP_04189692.1| hypothetical protein bcere0027_100 [Bacillus cereus AH676]
 gi|228727416|gb|EEL78607.1| hypothetical protein bcere0027_100 [Bacillus cereus AH676]
          Length = 166

 Score =  232 bits (594), Expect = 9e-60,   Method: Composition-based stats.
 Identities = 62/151 (41%), Positives = 87/151 (57%), Gaps = 2/151 (1%)

Query: 1   MKKGN--VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           MK+     FM  A+EEA+ A    E+P+GAV VL+ ++IS A N     +   AHAE+LA
Sbjct: 1   MKQDQDIYFMQLAIEEAKKAEEIQEVPIGAVIVLDGEVISVAHNLRETEQRSIAHAELLA 60

Query: 59  IRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
           I   C+ L    L +  LYVTLEPC MCA  I L+R++R+ YGAS+PKGG         T
Sbjct: 61  IDDACKKLGTWRLEDATLYVTLEPCPMCAGGIVLSRVKRVVYGASDPKGGCAGTLMNLLT 120

Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
               +H  E+  G+ E+    ++ +FF+E R
Sbjct: 121 DERFNHQCEVVSGVLEEECGTLLTNFFRELR 151


>gi|308066929|ref|YP_003868534.1| hypothetical protein PPE_00098 [Paenibacillus polymyxa E681]
 gi|305856208|gb|ADM67996.1| Conserved hypothetical protein [Paenibacillus polymyxa E681]
          Length = 163

 Score =  232 bits (594), Expect = 9e-60,   Method: Composition-based stats.
 Identities = 53/147 (36%), Positives = 75/147 (51%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
               +M  A++EA  A    E+P+GAV V +N+II R  N      D TAHAE++AIR  
Sbjct: 2   DHAYWMKEAIQEAYKAEALGEVPIGAVIVKDNEIIGRGYNLRETDADPTAHAEMVAIRQA 61

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
              L    L +  LYVTLEPC MCA AI  +R+  L YG ++PK G              
Sbjct: 62  SEHLGAWRLLDCRLYVTLEPCPMCAGAIVQSRVPHLIYGTTDPKAGCAGTLMNLLQEPRF 121

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H  E+  G+ ++    ++  FF+  R
Sbjct: 122 NHCTEVNSGVLQEECASLLTSFFRNLR 148


>gi|291549089|emb|CBL25351.1| Cytosine/adenosine deaminases [Ruminococcus torques L2-14]
          Length = 163

 Score =  232 bits (594), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 56/149 (37%), Positives = 80/149 (53%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M     +M  AL++A+ A    E P+G V V  +KII+R  NR    K+  AHAE+ AI+
Sbjct: 1   MTTDEKYMRAALKQAEKAYNLGETPIGCVIVHEDKIIARGYNRRNTDKNPLAHAEVAAIK 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              + L    L E  LYVTLEPC MCA AI  +RI R+  G  NPK G   +      + 
Sbjct: 61  KASKKLGDWRLEECTLYVTLEPCQMCAGAIVQSRIPRVVVGCMNPKAGCTGSILNLLDIQ 120

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  ++  G+ E+   Q+++ FF+E R
Sbjct: 121 AFNHQADLTTGVLEEECSQLMKQFFRELR 149


>gi|314932786|ref|ZP_07840155.1| cytidine/deoxycytidylate deaminase family protein [Staphylococcus
           caprae C87]
 gi|313654467|gb|EFS18220.1| cytidine/deoxycytidylate deaminase family protein [Staphylococcus
           caprae C87]
          Length = 168

 Score =  232 bits (594), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 59/149 (39%), Positives = 84/149 (56%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M+    +M  A++EAQ A    E+P+GAV V N+++I+ A N    L+  TAHAE +AI 
Sbjct: 1   MRTDKDYMRLAIKEAQKAQALGEVPIGAVIVKNDQVIAHAHNLRESLQLPTAHAEHIAIE 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              +++    L E  LYVTLEPC MCA AI ++RI R+ YGA +PKGG   +        
Sbjct: 61  RASKVVGSWRLEECTLYVTLEPCVMCAGAIVMSRIPRVVYGAVDPKGGCTGSLMNLLEKP 120

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H   +  GI E     +++DFFK  R
Sbjct: 121 QFNHRAIVESGILENECSTLLRDFFKNIR 149


>gi|228937324|ref|ZP_04099972.1| hypothetical protein bthur0008_110 [Bacillus thuringiensis serovar
           berliner ATCC 10792]
 gi|228970210|ref|ZP_04130871.1| hypothetical protein bthur0003_100 [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228976780|ref|ZP_04137194.1| hypothetical protein bthur0002_100 [Bacillus thuringiensis Bt407]
 gi|228782942|gb|EEM31106.1| hypothetical protein bthur0002_100 [Bacillus thuringiensis Bt407]
 gi|228789511|gb|EEM37429.1| hypothetical protein bthur0003_100 [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228822349|gb|EEM68329.1| hypothetical protein bthur0008_110 [Bacillus thuringiensis serovar
           berliner ATCC 10792]
 gi|326937814|gb|AEA13710.1| cytosine deaminase [Bacillus thuringiensis serovar chinensis CT-43]
          Length = 166

 Score =  232 bits (594), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 61/151 (40%), Positives = 87/151 (57%), Gaps = 2/151 (1%)

Query: 1   MKKGN--VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           M++     FM  A+EEA+ A    E+P+GAV VL+ ++IS A N     +   AHAE+LA
Sbjct: 1   MEQDQDIYFMQLAIEEAKKAEEIQEVPIGAVIVLDGEVISVAHNLRETEQRSIAHAELLA 60

Query: 59  IRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
           I   C+ L    L +  LYVTLEPC MCA  I L+R++R+ YGAS+PKGG         T
Sbjct: 61  IDEACKKLGTWRLEDATLYVTLEPCPMCAGGIVLSRVKRVVYGASDPKGGCAGTLMNLLT 120

Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
               +H  E+  G+ E+    ++ +FF+E R
Sbjct: 121 DERFNHQCEVVSGVLEEECGTLLTNFFRELR 151


>gi|206972670|ref|ZP_03233610.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein
           [Bacillus cereus AH1134]
 gi|228950569|ref|ZP_04112705.1| hypothetical protein bthur0006_110 [Bacillus thuringiensis serovar
           kurstaki str. T03a001]
 gi|229077294|ref|ZP_04209977.1| hypothetical protein bcere0023_200 [Bacillus cereus Rock4-2]
 gi|229176621|ref|ZP_04304027.1| hypothetical protein bcere0005_100 [Bacillus cereus 172560W]
 gi|206732390|gb|EDZ49572.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein
           [Bacillus cereus AH1134]
 gi|228606851|gb|EEK64266.1| hypothetical protein bcere0005_100 [Bacillus cereus 172560W]
 gi|228706017|gb|EEL58322.1| hypothetical protein bcere0023_200 [Bacillus cereus Rock4-2]
 gi|228809112|gb|EEM55595.1| hypothetical protein bthur0006_110 [Bacillus thuringiensis serovar
           kurstaki str. T03a001]
          Length = 166

 Score =  232 bits (593), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 61/151 (40%), Positives = 86/151 (56%), Gaps = 2/151 (1%)

Query: 1   MKKGN--VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           M++     FM  A+EEA+ A    E+P+GAV VL+ ++IS A N     +   AHAE+LA
Sbjct: 1   MEQDQDIYFMQLAIEEAKKAEEIQEVPIGAVIVLDGEVISVAHNLRETEQRSIAHAELLA 60

Query: 59  IRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
           I   C+ L    L +  LYVTLEPC MCA  I L+R++R+ YGAS+PKGG         T
Sbjct: 61  IDEACKKLGTWRLEDATLYVTLEPCPMCAGGIVLSRVKRVVYGASDPKGGCAGTLMNLLT 120

Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
               +H  E+  G+ E+    ++  FF+E R
Sbjct: 121 DERFNHQCEVVSGVLEEECGTLLTSFFRELR 151


>gi|228956462|ref|ZP_04118260.1| hypothetical protein bthur0005_100 [Bacillus thuringiensis serovar
           pakistani str. T13001]
 gi|228803219|gb|EEM50039.1| hypothetical protein bthur0005_100 [Bacillus thuringiensis serovar
           pakistani str. T13001]
          Length = 166

 Score =  232 bits (593), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 62/151 (41%), Positives = 87/151 (57%), Gaps = 2/151 (1%)

Query: 1   MKKGN--VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           M++     FM  A+EEA+ A    E+P+GAV VL+ +IIS A N     +   AHAE+LA
Sbjct: 1   MEQDQDIYFMQLAIEEAKKAEEIQEVPIGAVIVLDGEIISVAHNLRETEQRSIAHAELLA 60

Query: 59  IRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
           I   C+ L    L +  LYVTLEPC MCA  I L+R++R+ YGAS+PKGG         T
Sbjct: 61  IDDACKKLGTWRLEDATLYVTLEPCPMCAGGIVLSRVKRVVYGASDPKGGCAGTLMNLLT 120

Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
               +H  E+  G+ E+    ++ +FF+E R
Sbjct: 121 DERFNHQCEVVSGVLEEECGTLLTNFFRELR 151


>gi|312142718|ref|YP_003994164.1| CMP/dCMP deaminase zinc-binding protein [Halanaerobium sp.
           'sapolanicus']
 gi|311903369|gb|ADQ13810.1| CMP/dCMP deaminase zinc-binding protein [Halanaerobium sp.
           'sapolanicus']
          Length = 149

 Score =  232 bits (593), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 57/149 (38%), Positives = 90/149 (60%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M     +M  AL EA+ A  R E+P+GAV V +++++ R  N   + +D T+HAEI+A++
Sbjct: 1   MNFDQKYMQMALAEARKAYQRAEVPIGAVVVCDDRVVGRGFNLREQTQDPTSHAEIIALK 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              +  +   L +  LYVTLEPC MCA AI  +RI+RL Y A++PK G +++  Q     
Sbjct: 61  EAAKEQASWRLEDCQLYVTLEPCPMCAGAILQSRIKRLVYAAADPKAGAVKSLYQLLGDD 120

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  E+  G+ E  + Q+++DFF+E R
Sbjct: 121 RFNHQVEVVSGVMEAEAAQLLKDFFRELR 149


>gi|218234516|ref|YP_002364872.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein
           [Bacillus cereus B4264]
 gi|218162473|gb|ACK62465.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein
           [Bacillus cereus B4264]
          Length = 166

 Score =  232 bits (593), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 61/151 (40%), Positives = 87/151 (57%), Gaps = 2/151 (1%)

Query: 1   MKKGN--VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           M++     FM  A+EEA+ A    E+P+GAV VL+ ++IS A N     +   AHAE+LA
Sbjct: 1   MEQDQDIYFMQLAIEEAKKAEEIQEVPIGAVIVLDGEVISVAHNLRETEQRSIAHAELLA 60

Query: 59  IRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
           I   C+ L    L +  LYVTLEPC MCA  I L+R++R+ YGAS+PKGG         T
Sbjct: 61  IDDACKKLGTWRLEDATLYVTLEPCPMCAGGIVLSRVKRVVYGASDPKGGCAGTLMNLLT 120

Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
               +H  E+  G+ E+    ++ +FF+E R
Sbjct: 121 DDRFNHQCEVVSGVLEEECGTLLTNFFRELR 151


>gi|315644422|ref|ZP_07897555.1| CMP/dCMP deaminase zinc-binding protein [Paenibacillus vortex V453]
 gi|315280172|gb|EFU43465.1| CMP/dCMP deaminase zinc-binding protein [Paenibacillus vortex V453]
          Length = 163

 Score =  232 bits (593), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 51/147 (34%), Positives = 74/147 (50%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
               +M  A+ EA+ A    E+P+GAV V  ++II R  N      D TAHAE++AIR  
Sbjct: 15  NHEHWMREAIAEARKAEELGEVPIGAVIVRGDEIIGRGYNLRETTYDGTAHAEMVAIREA 74

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
            + L    L +  LYVTLEPC MCA AI  +R+ +L YG  +PK G              
Sbjct: 75  SQHLGAWRLLDCRLYVTLEPCPMCAGAIVQSRVPQLIYGTGDPKAGCAGTLMNLLQEPRF 134

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H   +  G+ ++    ++  FF+  R
Sbjct: 135 NHRTTVIDGVLQEECASLLTQFFRRLR 161


>gi|282849118|ref|ZP_06258503.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Veillonella parvula ATCC 17745]
 gi|282580822|gb|EFB86220.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Veillonella parvula ATCC 17745]
          Length = 181

 Score =  232 bits (593), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 70/148 (47%), Positives = 88/148 (59%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
            +   FM  ALEEA  A    EIP+GA+ V NN IISR  NR     D TAHAE+L IR 
Sbjct: 17  SRDEYFMGFALEEAHKAYALGEIPIGAILVQNNTIISRHHNRRELDHDATAHAEVLVIRE 76

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
            C +L +  L    LYVT+EPC MCA AI  +RI R+ YGAS+ KGG +E+     +   
Sbjct: 77  ACDVLKRWRLTGCTLYVTIEPCPMCAGAIINSRIDRVVYGASDYKGGAVESLFNVLSHPG 136

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H PE+  G+      QI++DFFKERR
Sbjct: 137 LNHEPELASGVLGDECSQIMKDFFKERR 164


>gi|294795071|ref|ZP_06760206.1| LOW QUALITY PROTEIN: cytidine/deoxycytidylate deaminase family
           protein [Veillonella sp. 3_1_44]
 gi|294454433|gb|EFG22807.1| LOW QUALITY PROTEIN: cytidine/deoxycytidylate deaminase family
           protein [Veillonella sp. 3_1_44]
          Length = 164

 Score =  232 bits (593), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 70/148 (47%), Positives = 88/148 (59%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
            +   FM  ALEEA  A    EIP+GA+ V NN IISR  NR     D TAHAE+L IR 
Sbjct: 17  SRDEYFMGFALEEAHKAYALGEIPIGAILVQNNTIISRHHNRRELDHDATAHAEVLVIRE 76

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
            C +L +  L    LYVT+EPC MCA AI  +RI R+ YGAS+ KGG +E+     +   
Sbjct: 77  ACDVLKRWRLTGCTLYVTIEPCPMCAGAIINSRIDRVVYGASDYKGGAVESLFNVLSHPG 136

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H PE+  G+      QI++DFFKERR
Sbjct: 137 LNHEPELASGVLGDECSQIMKDFFKERR 164


>gi|152973870|ref|YP_001373387.1| CMP/dCMP deaminase zinc-binding [Bacillus cereus subsp. cytotoxis
           NVH 391-98]
 gi|152022622|gb|ABS20392.1| CMP/dCMP deaminase zinc-binding [Bacillus cytotoxicus NVH 391-98]
          Length = 164

 Score =  232 bits (593), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 62/149 (41%), Positives = 85/149 (57%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M++   FM  A+EEA+ A    E+P+GAV VL+ K+IS A N     +   AHAE+LAI 
Sbjct: 1   MEQDMYFMKLAIEEAKKAEKIEEVPIGAVLVLDGKVISSAHNLRETEQRSIAHAELLAID 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
             C+ L    L    LYVTLEPC MCA  I L+R++R+ YGAS+PKGG         T  
Sbjct: 61  KACKALGTWRLEHATLYVTLEPCPMCAGGIVLSRVKRVVYGASDPKGGCAGTLMNLLTDE 120

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  E+  G+ E+    ++  FF+E R
Sbjct: 121 RFNHQCEVVSGVMEEECGALLTSFFRELR 149


>gi|319399688|gb|EFV87937.1| cytidine and deoxycytidylate deaminase zinc-binding region family
           protein [Staphylococcus epidermidis FRI909]
          Length = 168

 Score =  232 bits (593), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 58/149 (38%), Positives = 86/149 (57%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           MKK + +M  A++EA  A    E+P+GAV V  +++I+RA N    L+  TAHAE +AI 
Sbjct: 1   MKKNHDYMRLAIKEAHKAKALGEVPIGAVIVKEDQVIARAHNLRETLQQPTAHAEHIAIE 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
               ++    L E  LYVTLEPC MCA  I ++RI ++ YGA++PKGG   +        
Sbjct: 61  RASEVVGSWRLEECTLYVTLEPCVMCAGTIIMSRIPKVVYGATDPKGGCSGSLMNLLEQP 120

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H   +  GI E+   ++++ FFKE R
Sbjct: 121 QFNHRAIVEKGILEEECAELLRSFFKEIR 149


>gi|229188306|ref|ZP_04315357.1| Uncharacterized deaminase yaaJ [Bacillus cereus ATCC 10876]
 gi|228595174|gb|EEK52942.1| Uncharacterized deaminase yaaJ [Bacillus cereus ATCC 10876]
          Length = 166

 Score =  232 bits (592), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 62/151 (41%), Positives = 86/151 (56%), Gaps = 2/151 (1%)

Query: 1   MKKGN--VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           M++     FM  A+EEA+ A    E+P+GAV VLN ++IS A N     +   AHAE+LA
Sbjct: 1   MEQDQDIYFMQLAIEEAKKAEEIQEVPIGAVIVLNGEVISVAHNLRETEQRSIAHAELLA 60

Query: 59  IRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
           I   C+ L    L +  LYVTLEPC MCA  I L+R++R+ YGAS+PKGG         T
Sbjct: 61  IDEACKKLGTWRLEDATLYVTLEPCPMCAGGIVLSRVKRVVYGASDPKGGCAGTLMNLLT 120

Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
               +H  E+  G+ E+    ++  FF+E R
Sbjct: 121 DERFNHQCEVVSGVLEEECGTLLTSFFRELR 151


>gi|229067785|ref|ZP_04201104.1| hypothetical protein bcere0025_110 [Bacillus cereus F65185]
 gi|228715338|gb|EEL67195.1| hypothetical protein bcere0025_110 [Bacillus cereus F65185]
          Length = 166

 Score =  232 bits (592), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 61/151 (40%), Positives = 86/151 (56%), Gaps = 2/151 (1%)

Query: 1   MKKGN--VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           M++     FM  A+EEA+ A    E+P+GAV VL+ ++IS A N     +   AHAE+LA
Sbjct: 1   MEQDQDIYFMQLAIEEAKKAEEIQEVPIGAVIVLDGEVISVAHNLRETEQRSIAHAELLA 60

Query: 59  IRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
           I   C+ L    L +  LYVTLEPC MCA  I L+R++R+ YGAS+PKGG         T
Sbjct: 61  IDEACKKLGTWRLEDATLYVTLEPCPMCAGGIVLSRVKRVVYGASDPKGGCAGTLMNLLT 120

Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
               +H  E+  G+ E+    ++  FF+E R
Sbjct: 121 DERFNHQCEVVSGVLEEECGTLLTSFFRELR 151


>gi|196251180|ref|ZP_03149855.1| CMP/dCMP deaminase zinc-binding [Geobacillus sp. G11MC16]
 gi|196209306|gb|EDY04090.1| CMP/dCMP deaminase zinc-binding [Geobacillus sp. G11MC16]
          Length = 169

 Score =  232 bits (592), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 57/149 (38%), Positives = 80/149 (53%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M     +M  A+EEA+ A    E+P+GAV V + ++I+RA N     +   AHAEILAI 
Sbjct: 10  MNNDEYYMRLAIEEAKKAEQIGEVPIGAVIVQDGRVIARAHNLRETEQRAIAHAEILAID 69

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
             C+      L    LYVTLEPC MCA AI L+RI R+ +GAS+PKGG           +
Sbjct: 70  EACQATGSWRLERATLYVTLEPCAMCAGAIVLSRIERVVFGASDPKGGCAGTLMNLLQES 129

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  ++  G+       ++ DFF+  R
Sbjct: 130 RFNHQADVTSGVLASECGSLLSDFFRRLR 158


>gi|229165011|ref|ZP_04292809.1| hypothetical protein bcere0007_110 [Bacillus cereus AH621]
 gi|228618463|gb|EEK75490.1| hypothetical protein bcere0007_110 [Bacillus cereus AH621]
          Length = 164

 Score =  232 bits (592), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 63/149 (42%), Positives = 87/149 (58%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M++   FM  A+EEA+ A    E+P+GAV VL+ ++IS A N     +   AHAE+LAI 
Sbjct: 1   MERDIYFMQLAIEEAKKAEAIQEVPIGAVIVLDGEVISVAHNLRETEQRSIAHAELLAID 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
             C+ L    L +  LYVTLEPC MCA  I L+RI+R+ YGAS+PKGG         T  
Sbjct: 61  EACKKLGTWRLEDATLYVTLEPCPMCAGGIVLSRIKRVIYGASDPKGGCAGTLMNLLTDE 120

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  E+ PG+ E+    ++  FF+E R
Sbjct: 121 RFNHQCEVVPGVLEEECGTLLTIFFRELR 149


>gi|229142827|ref|ZP_04271271.1| hypothetical protein bcere0012_100 [Bacillus cereus BDRD-ST24]
 gi|229148430|ref|ZP_04276688.1| hypothetical protein bcere0011_100 [Bacillus cereus m1550]
 gi|296500855|ref|YP_003662555.1| cytosine deaminase [Bacillus thuringiensis BMB171]
 gi|228635039|gb|EEK91610.1| hypothetical protein bcere0011_100 [Bacillus cereus m1550]
 gi|228640641|gb|EEK97027.1| hypothetical protein bcere0012_100 [Bacillus cereus BDRD-ST24]
 gi|296321907|gb|ADH04835.1| cytosine deaminase [Bacillus thuringiensis BMB171]
          Length = 166

 Score =  232 bits (592), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 61/151 (40%), Positives = 87/151 (57%), Gaps = 2/151 (1%)

Query: 1   MKKGN--VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           M++     FM  A+EEA+ A    E+P+GAV VL+ ++IS A N     +   AHAE+LA
Sbjct: 1   MEQDQDIYFMQLAIEEAKKAEEIQEVPIGAVIVLDGEVISVAHNLRETEQRSIAHAELLA 60

Query: 59  IRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
           I   C+ L    L +  LYVTLEPC MCA  I L+R++R+ YGAS+PKGG         T
Sbjct: 61  IDDACKKLGTWRLEDATLYVTLEPCPMCAGGIVLSRVKRVVYGASDPKGGCAGTLMNLLT 120

Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
               +H  E+  G+ E+    ++ +FF+E R
Sbjct: 121 DERFNHQCEVVSGVLEEECGTLLTNFFRELR 151


>gi|197285737|ref|YP_002151609.1| tRNA-specific adenosine deaminase [Proteus mirabilis HI4320]
 gi|194683224|emb|CAR43904.1| tRNA-specific adenosine deaminase [Proteus mirabilis HI4320]
          Length = 176

 Score =  232 bits (592), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 61/149 (40%), Positives = 84/149 (56%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +K    +M  A+E+A  A    EIPVGAV V  NKII++  N +    D TAHAEI+A+R
Sbjct: 4   IKDDIYWMHKAIEQAHKAQQLGEIPVGAVLVAENKIIAKGWNHSIIDNDPTAHAEIMALR 63

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
            G + L    L +  LY+TLEPC MCA AI  +R++R+ YGAS+ K G   +        
Sbjct: 64  KGGKHLQNYRLLDATLYITLEPCVMCAGAIVHSRVKRVVYGASDLKTGAAGSFIDILQHP 123

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  EI  G+  +   Q++  FFK RR
Sbjct: 124 GMNHKVEITSGVLGEECAQLLSQFFKMRR 152


>gi|291537693|emb|CBL10805.1| Cytosine/adenosine deaminases [Roseburia intestinalis M50/1]
          Length = 154

 Score =  232 bits (592), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 51/149 (34%), Positives = 80/149 (53%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M +   +M  A+ +A+ A   +E+P+G V V ++KII+R  NR     +  AHAE+ AIR
Sbjct: 1   MNQDEKYMKAAIRQAKKAYALDEVPIGCVIVQDDKIIARGYNRRNTEGNTLAHAELTAIR 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              +      L +  +YVTLEPC MCA AI  +R++++  G+ NPK G   +      + 
Sbjct: 61  KASKKTGDWRLEDCTMYVTLEPCQMCAGAIVQSRMKKVVIGSMNPKAGCAGSVLNLLQMQ 120

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  EI  G+  +    ++  FFKE R
Sbjct: 121 QFNHQVEIEKGVLGEECSAMLSTFFKELR 149


>gi|229107707|ref|ZP_04237345.1| hypothetical protein bcere0018_100 [Bacillus cereus Rock1-15]
 gi|228675747|gb|EEL30953.1| hypothetical protein bcere0018_100 [Bacillus cereus Rock1-15]
          Length = 166

 Score =  231 bits (591), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 61/151 (40%), Positives = 87/151 (57%), Gaps = 2/151 (1%)

Query: 1   MKKGN--VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           M++     FM  A+EEA+ A    E+P+GAV VL+ ++IS A N     +   AHAE+LA
Sbjct: 1   MEQDQDIYFMQLAIEEAKKAEEIQEVPIGAVIVLDGEVISVAHNLRETEQRSIAHAELLA 60

Query: 59  IRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
           I   C+ L    L +  LYVTLEPC MCA  I L+R++R+ YGAS+PKGG         T
Sbjct: 61  IDDACKKLGTWRLEDATLYVTLEPCPMCAGGIVLSRVKRVVYGASDPKGGCAGTLMNLLT 120

Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
               +H  E+  G+ E+    ++ +FF+E R
Sbjct: 121 DERFNHQCEVVSGVLEEECGALLTNFFRELR 151


>gi|166031359|ref|ZP_02234188.1| hypothetical protein DORFOR_01047 [Dorea formicigenerans ATCC
           27755]
 gi|166028764|gb|EDR47521.1| hypothetical protein DORFOR_01047 [Dorea formicigenerans ATCC
           27755]
          Length = 157

 Score =  231 bits (591), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 54/149 (36%), Positives = 81/149 (54%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M     +M  A+++A+ A    E+P+G V V  +KII+R  NR    K+  AHAE+ AIR
Sbjct: 1   MTADEKYMREAIKQAKKAYAIGEVPIGCVIVYQDKIIARGYNRRTIDKNTLAHAELQAIR 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              + +    L E  +YVTLEPC MC+ AI  +R+ R+  G  NPK G   +      + 
Sbjct: 61  KASKKMEDWRLEECTMYVTLEPCQMCSGAIVQSRMTRVVVGCMNPKAGCAGSILNLLQMP 120

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  E+  G+ E+   Q+++ FFKE R
Sbjct: 121 QFNHQVELTTGVLEEECSQMMKTFFKELR 149


>gi|294792948|ref|ZP_06758094.1| LOW QUALITY PROTEIN: cytidine/deoxycytidylate deaminase family
           protein [Veillonella sp. 6_1_27]
 gi|294455893|gb|EFG24257.1| LOW QUALITY PROTEIN: cytidine/deoxycytidylate deaminase family
           protein [Veillonella sp. 6_1_27]
          Length = 164

 Score =  231 bits (591), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 70/148 (47%), Positives = 89/148 (60%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
            +   FM+ ALEEA  A    EIP+GA+ V NN IISR  NR     D TAHAE+L IR 
Sbjct: 17  TRDEYFMAFALEEAHKAYDLGEIPIGAILVQNNTIISRHHNRRELDHDATAHAEVLVIRE 76

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
            C +L +  L    LYVT+EPC MCA AI  +RI R+ YGAS+ KGG +E+     +   
Sbjct: 77  ACGVLKRWRLTGCTLYVTIEPCPMCAGAIINSRIDRVVYGASDYKGGAVESLFNVLSHPG 136

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H PE+  G+      QI++DFFKERR
Sbjct: 137 LNHEPELASGVLGDECSQIMKDFFKERR 164


>gi|229015424|ref|ZP_04172427.1| hypothetical protein bcere0030_220 [Bacillus cereus AH1273]
 gi|229021629|ref|ZP_04178217.1| hypothetical protein bcere0029_110 [Bacillus cereus AH1272]
 gi|228739675|gb|EEL90083.1| hypothetical protein bcere0029_110 [Bacillus cereus AH1272]
 gi|228745866|gb|EEL95865.1| hypothetical protein bcere0030_220 [Bacillus cereus AH1273]
          Length = 164

 Score =  231 bits (591), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 61/149 (40%), Positives = 87/149 (58%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M +   FM  A+EEA+ A    E+P+GAV VL++++IS A N     +   AHAE+LAI 
Sbjct: 1   MDRDIYFMQLAIEEAKKAEAIQEVPIGAVIVLDDEVISVAHNLRETEQRSIAHAELLAID 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
             C+ L    L +  LYVTLEPC MCA  I L+R++R+ YGAS+PKGG         T  
Sbjct: 61  EACKKLGTWRLEDATLYVTLEPCPMCAGGIVLSRVKRVVYGASDPKGGCAGTLMNLLTDE 120

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  E+  G+ E+    ++ +FF+E R
Sbjct: 121 RFNHQCEVVAGVLEEECGTLLTNFFRELR 149


>gi|240145078|ref|ZP_04743679.1| tRNA-specific adenosine deaminase [Roseburia intestinalis L1-82]
 gi|257202749|gb|EEV01034.1| tRNA-specific adenosine deaminase [Roseburia intestinalis L1-82]
 gi|291537828|emb|CBL10939.1| Cytosine/adenosine deaminases [Roseburia intestinalis XB6B4]
          Length = 154

 Score =  231 bits (591), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 52/149 (34%), Positives = 80/149 (53%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M +   +M  A+ +A+ A   +E+P+G V V N+KII+R  NR     +  AHAE+ AIR
Sbjct: 1   MNQDEKYMKAAIRQAKKAYALDEVPIGCVIVQNDKIIARGYNRRNTEGNTLAHAELTAIR 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              +      L +  +YVTLEPC MCA AI  +R++++  G+ NPK G   +      + 
Sbjct: 61  KASKKTGDWRLEDCTMYVTLEPCQMCAGAIVQSRMKKVVIGSMNPKAGCAGSVLNLLQMQ 120

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  EI  G+  +    ++  FFKE R
Sbjct: 121 QFNHQVEIEKGVLGEECSAMLSTFFKELR 149


>gi|57866115|ref|YP_187800.1| cytidine/deoxycytidylate deaminase family protein [Staphylococcus
           epidermidis RP62A]
 gi|242241897|ref|ZP_04796342.1| deaminase [Staphylococcus epidermidis W23144]
 gi|251809981|ref|ZP_04824454.1| deaminase [Staphylococcus epidermidis BCM-HMP0060]
 gi|282874984|ref|ZP_06283859.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Staphylococcus epidermidis SK135]
 gi|57636773|gb|AAW53561.1| cytidine/deoxycytidylate deaminase family protein [Staphylococcus
           epidermidis RP62A]
 gi|242234675|gb|EES36987.1| deaminase [Staphylococcus epidermidis W23144]
 gi|251806524|gb|EES59181.1| deaminase [Staphylococcus epidermidis BCM-HMP0060]
 gi|281296312|gb|EFA88831.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Staphylococcus epidermidis SK135]
          Length = 168

 Score =  231 bits (591), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 58/149 (38%), Positives = 85/149 (57%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           MKK + +M  A+ EA  A    E+P+GAV V  +++I+RA N    L+  TAHAE +AI 
Sbjct: 1   MKKNHDYMRLAINEAHKAKALGEVPIGAVIVKEDQVIARAHNLRETLQQPTAHAEHIAIE 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
               ++    L E  LYVTLEPC MCA  I ++RI ++ YGA++PKGG   +        
Sbjct: 61  RASEVVGSWRLEECTLYVTLEPCVMCAGTIIMSRIPKVVYGATDPKGGCSGSLMNLLEQP 120

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H   +  GI E+   ++++ FFKE R
Sbjct: 121 QFNHRAIVEKGILEEECAELLRSFFKEIR 149


>gi|289551636|ref|YP_003472540.1| tRNA-specific adenosine-34 deaminase [Staphylococcus lugdunensis
           HKU09-01]
 gi|289181167|gb|ADC88412.1| tRNA-specific adenosine-34 deaminase [Staphylococcus lugdunensis
           HKU09-01]
          Length = 158

 Score =  231 bits (591), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 56/149 (37%), Positives = 81/149 (54%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M+    +M  A+ EA+ A    E+P+GAV V + ++I+RA N     +  TAHAE +AI 
Sbjct: 1   MRNDEYYMKIAIAEARKAEAIGEVPIGAVIVKDTQVIARAHNLRETSQQPTAHAEHIAIE 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
               +L    L    LYVTLEPC MCA AI ++RI R+ YGA +PKGG   +        
Sbjct: 61  RASEVLGSWRLEACTLYVTLEPCVMCAGAIVMSRIPRVVYGAIDPKGGCSGSLMNLLEQP 120

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H   +  G+ EQ   Q+++ FF+  R
Sbjct: 121 QLNHQAIVKTGVLEQECGQLLRSFFQRLR 149


>gi|229074082|ref|ZP_04207131.1| hypothetical protein bcere0024_110 [Bacillus cereus Rock4-18]
 gi|229094742|ref|ZP_04225750.1| hypothetical protein bcere0020_110 [Bacillus cereus Rock3-29]
 gi|229100808|ref|ZP_04231626.1| hypothetical protein bcere0019_200 [Bacillus cereus Rock3-28]
 gi|228682615|gb|EEL36674.1| hypothetical protein bcere0019_200 [Bacillus cereus Rock3-28]
 gi|228688680|gb|EEL42550.1| hypothetical protein bcere0020_110 [Bacillus cereus Rock3-29]
 gi|228709045|gb|EEL61169.1| hypothetical protein bcere0024_110 [Bacillus cereus Rock4-18]
          Length = 166

 Score =  231 bits (590), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 61/151 (40%), Positives = 87/151 (57%), Gaps = 2/151 (1%)

Query: 1   MKKGN--VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           M++     FM  A+EEA+ A    E+P+GAV VL+ ++IS A N     +   AHAE+LA
Sbjct: 1   MEQDQDIYFMQLAIEEAKKAEEIQEVPIGAVIVLDGEVISVAHNLRETEQRSIAHAELLA 60

Query: 59  IRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
           I   C+ L    L +  LYVTLEPC MCA  I L+R++R+ YGAS+PKGG         T
Sbjct: 61  IDEACKKLGTWRLEDATLYVTLEPCPMCAGGIVLSRVKRVVYGASDPKGGCAGTLMNLLT 120

Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
               +H  E+  G+ E+    ++ +FF+E R
Sbjct: 121 DERFNHQCEVVTGVLEEECGTLLTNFFRELR 151


>gi|332971231|gb|EGK10194.1| zinc-binding domain protein [Desmospora sp. 8437]
          Length = 152

 Score =  231 bits (590), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 60/145 (41%), Positives = 84/145 (57%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           + +M  A+ EA+ A  + E+P+GAV V   +II R  N     +D TAHAE++AIR   R
Sbjct: 4   DQWMMEAIREAEQAEAKGEVPIGAVLVREGEIIGRGHNLRESHQDPTAHAEMIAIREAAR 63

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
           +L    L   +LYVTLEPC MCA AI L+R+  L YGA +PKGG              +H
Sbjct: 64  LLGGWRLAGCELYVTLEPCPMCAGAILLSRLDTLIYGAYDPKGGCAGTLMNLPRDDRFNH 123

Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149
             E+  GI EQ   ++++DFF++ R
Sbjct: 124 QVEVVGGILEQECGELLRDFFRKLR 148


>gi|259048082|ref|ZP_05738483.1| tRNA-specific adenosine deaminase [Granulicatella adiacens ATCC
           49175]
 gi|259035143|gb|EEW36398.1| tRNA-specific adenosine deaminase [Granulicatella adiacens ATCC
           49175]
          Length = 168

 Score =  231 bits (590), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 60/149 (40%), Positives = 88/149 (59%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +++   FM  AL+EAQ A  + E+P+GAV VLN +II R  N   + +D T HAEI AIR
Sbjct: 3   LQEKEFFMREALKEAQKAYDQEEVPIGAVVVLNGEIIGRGHNLREKEQDATLHAEIKAIR 62

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              + L    L + +L+VTLEPC MC+ A+ LAR++++ +GA +PK G           +
Sbjct: 63  QANQHLGSWRLEDCELFVTLEPCPMCSGAMILARMKKVVFGAFDPKAGTAGTFMNLLQDS 122

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  E+  GI E   ++I+Q FFK  R
Sbjct: 123 RFNHQVEVEQGILEDECKEILQQFFKGLR 151


>gi|239825602|ref|YP_002948226.1| CMP/dCMP deaminase zinc-binding [Geobacillus sp. WCH70]
 gi|239805895|gb|ACS22960.1| CMP/dCMP deaminase zinc-binding [Geobacillus sp. WCH70]
          Length = 160

 Score =  231 bits (590), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 60/149 (40%), Positives = 83/149 (55%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M     +M  A+EEA+ A    E+P+GA+ V +  II+RA N     +   AHAEILAI 
Sbjct: 1   MVNDEYYMRLAIEEAKKAEQIGEVPIGAIIVQDGHIIARAHNLRETEQRAIAHAEILAID 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
             C+ +    L +  LYVTLEPC MCA AI LARI+R+ +GAS+PKGG            
Sbjct: 61  KACKEVGSWRLEDATLYVTLEPCAMCAGAIVLARIKRVVFGASDPKGGCAGTLMNLLQEG 120

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  E+  GI  +   Q++  FF++ R
Sbjct: 121 RFNHQAEVTSGILGEECGQMLSSFFRKLR 149


>gi|229053868|ref|ZP_04195305.1| hypothetical protein bcere0026_110 [Bacillus cereus AH603]
 gi|228721478|gb|EEL72995.1| hypothetical protein bcere0026_110 [Bacillus cereus AH603]
          Length = 164

 Score =  231 bits (590), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 62/149 (41%), Positives = 86/149 (57%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M++   FM  A+EEA+ A    E+P+GAV VL+ ++IS A N     +   AHAE+LAI 
Sbjct: 1   MERDIYFMQLAIEEAKKAEAIQEVPIGAVIVLDGEVISVAHNLRETEQRSIAHAELLAID 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
             C+ L    L +  LYVTLEPC MCA  I L+RI+R+ YGAS+PKGG         T  
Sbjct: 61  EACKKLGTWRLEDATLYVTLEPCPMCAGGIVLSRIKRVVYGASDPKGGCAGTLMNLLTDE 120

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  E+  G+ E+    ++  FF+E R
Sbjct: 121 RFNHQCEVVAGVLEEECGTLLTIFFRELR 149


>gi|315659096|ref|ZP_07911961.1| zinc-binding domain protein [Staphylococcus lugdunensis M23590]
 gi|315495820|gb|EFU84150.1| zinc-binding domain protein [Staphylococcus lugdunensis M23590]
          Length = 158

 Score =  231 bits (590), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 56/149 (37%), Positives = 81/149 (54%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M+    +M  A+ EA+ A    E+P+GAV V + ++I+RA N     +  TAHAE +AI 
Sbjct: 1   MRNDEYYMKIAIAEARKAEAIGEVPIGAVIVKDTQVIARAHNLRETSQQPTAHAEHIAIE 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
               +L    L    LYVTLEPC MCA AI ++RI R+ YGA +PKGG   +        
Sbjct: 61  RASEVLGSWRLEACTLYVTLEPCVMCAGAIVMSRIPRVVYGAIDPKGGCSGSLMNLLEQP 120

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H   +  G+ EQ   Q+++ FF+  R
Sbjct: 121 QFNHQAIVKTGVLEQECGQLLRSFFQRLR 149


>gi|167464544|ref|ZP_02329633.1| possible nucleoside deaminase [Paenibacillus larvae subsp. larvae
           BRL-230010]
          Length = 152

 Score =  230 bits (589), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 55/149 (36%), Positives = 75/149 (50%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M++   +M  A+ EA  A   +E+P+GAV V   +II R  N      D TAHAE++AIR
Sbjct: 1   MEEHEQWMQEAISEALKAETIHEVPIGAVIVHEGRIIGRGHNLRETSMDPTAHAEMIAIR 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
                L    L    LYVTLEPC MCA AI  +RI R+ YG  +PK G            
Sbjct: 61  EASEYLRAWRLLNCTLYVTLEPCPMCAGAIVQSRILRVVYGTIDPKAGCAGTLMNLLQED 120

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  E+  GI  +    ++  FF++ R
Sbjct: 121 RFNHRVEVINGILREECSSLLTSFFRKLR 149


>gi|228963119|ref|ZP_04124290.1| Uncharacterized deaminase yaaJ [Bacillus thuringiensis serovar
           sotto str. T04001]
 gi|228796575|gb|EEM44012.1| Uncharacterized deaminase yaaJ [Bacillus thuringiensis serovar
           sotto str. T04001]
          Length = 195

 Score =  230 bits (589), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 61/151 (40%), Positives = 87/151 (57%), Gaps = 2/151 (1%)

Query: 1   MKKGN--VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           M++     FM  A+EEA+ A    E+P+GAV VL+ ++IS A N     +   AHAE+LA
Sbjct: 1   MEQDRDIYFMQLAIEEAKKAEEMQEVPIGAVIVLDGEVISVAHNLRETEQRSIAHAELLA 60

Query: 59  IRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
           I   C+ L    L +  LYVTLEPC MCA  I L+R++R+ YGAS+PKGG         T
Sbjct: 61  IDEACKKLGTWRLEDATLYVTLEPCPMCAGGIVLSRVKRVVYGASDPKGGCAGTLMNLLT 120

Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
               +H  E+  G+ E+    ++ +FF+E R
Sbjct: 121 DERFNHQCEVVTGVLEEECGTLLTNFFRELR 151


>gi|146312685|ref|YP_001177759.1| tRNA-specific adenosine deaminase [Enterobacter sp. 638]
 gi|145319561|gb|ABP61708.1| tRNA-adenosine deaminase [Enterobacter sp. 638]
          Length = 169

 Score =  230 bits (589), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 54/147 (36%), Positives = 76/147 (51%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
               +M  AL  A+ A    E+PVGAV V NN++I    NR     D TAHAEI+A+R G
Sbjct: 7   NHEYWMRHALLLAKRAWDEGEVPVGAVLVHNNQVIGEGWNRPIGRHDPTAHAEIMALRQG 66

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
             +L    L +  LYVTLEPC MC+ A+  +RI  L +GA + K G   +          
Sbjct: 67  GLVLQNYRLLDTTLYVTLEPCVMCSGAMVHSRIGTLVFGARDEKTGAAGSLMNVLGHPGM 126

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H  ++  G+       ++ DFF+ RR
Sbjct: 127 NHQVQVIDGVLAPECSGLLSDFFRMRR 153


>gi|325288211|ref|YP_004264392.1| tRNA-adenosine deaminase [Syntrophobotulus glycolicus DSM 8271]
 gi|324963612|gb|ADY54391.1| tRNA-adenosine deaminase [Syntrophobotulus glycolicus DSM 8271]
          Length = 148

 Score =  230 bits (589), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 59/147 (40%), Positives = 86/147 (58%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
           K   +M  AL++A+ A  ++E+P+GAV V N +I++ A N     +D TAHAE+LAI+  
Sbjct: 2   KHEDWMRLALKQAETALEKDEVPIGAVIVKNGEILALAHNEKETNQDPTAHAEMLAIKRA 61

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
            + L    L    LYVTLEPC MCA AI  +RI  L YGA + KGG + +          
Sbjct: 62  AQKLGAWRLSGATLYVTLEPCPMCAGAIIQSRIETLVYGADDSKGGAVGSVLNVLQHQLW 121

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H  EI  GI E+ S ++++ FF+ +R
Sbjct: 122 NHKVEIITGILEEESARLLKGFFRSKR 148


>gi|85857921|ref|YP_460123.1| tRNA-specific adenosine deaminase [Syntrophus aciditrophicus SB]
 gi|85721012|gb|ABC75955.1| tRNA-specific adenosine deaminase [Syntrophus aciditrophicus SB]
          Length = 187

 Score =  230 bits (589), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 61/146 (41%), Positives = 88/146 (60%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
              +M  ALEEA+ AA   E+P+GAV V  N++I+R+ N   +  D TAHAEILAIR   
Sbjct: 28  DERWMRLALEEARLAASEGEVPIGAVIVRENEVIARSHNMPVDRHDPTAHAEILAIREAA 87

Query: 64  RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123
             +    L  + LYVTLEPC MCA AI  AR++RL YG  +PKGG +++  +    +  +
Sbjct: 88  EKMKNYRLTGMTLYVTLEPCIMCAGAILQARLKRLVYGTGDPKGGAVDSLYRLLQDSRLN 147

Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149
           H  E+  G+ +    +I+  FF+E+R
Sbjct: 148 HFVEVTGGVLQASCAEILSGFFREKR 173


>gi|311028951|ref|ZP_07707041.1| CMP/dCMP deaminase zinc-binding protein [Bacillus sp. m3-13]
          Length = 161

 Score =  230 bits (589), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 55/147 (37%), Positives = 78/147 (53%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
           +   FM  A+EEA+ A    E+P+GAV V + K+IS+  N     +    HAEI+ I   
Sbjct: 2   QDEHFMKLAIEEAKKAEALKEVPIGAVLVHDGKVISKGYNLRETTQRSITHAEIMVIDQA 61

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
           C  L    L E  LYVTLEPC MCA AI  +RI ++ YGA +PK G           +  
Sbjct: 62  CEALQTWRLEEATLYVTLEPCPMCAGAIIQSRIMKVVYGAKDPKAGCAGTLMNILQDSRF 121

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H  E+  GI E+   +++  FF++ R
Sbjct: 122 NHQTEVVSGIMEEECGELLSSFFRKLR 148


>gi|163119172|ref|YP_077304.2| putative cytidine/deoxycytidylate deaminase, zinc-binding region
           YaaJ [Bacillus licheniformis ATCC 14580]
 gi|145902675|gb|AAU21666.2| putative Cytidine/deoxycytidylate deaminase, zinc-binding region
           YaaJ [Bacillus licheniformis ATCC 14580]
          Length = 196

 Score =  230 bits (589), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 58/149 (38%), Positives = 84/149 (56%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M +   +M  A+ EA+ A  + E+P+GAV VL+ +II+RA N     +   AHAE+L I 
Sbjct: 37  MTQDEFYMKEAVNEARKAEEKGEVPIGAVLVLDGEIIARAHNLRETEQRSVAHAEMLVIE 96

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
             CR L    L    LYVTLEPC MCA A  L+RI ++ +GAS+PKGG            
Sbjct: 97  EACRKLGTWRLERAVLYVTLEPCPMCAGAAVLSRIDKVVFGASDPKGGCAGTLMNLLQEE 156

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  E+  G+ E+   +++ DFF++ R
Sbjct: 157 RFNHQAEVVSGVMEEECGRMLSDFFRKLR 185


>gi|30018294|ref|NP_829925.1| cytosine deaminase [Bacillus cereus ATCC 14579]
 gi|229125538|ref|ZP_04254572.1| hypothetical protein bcere0015_100 [Bacillus cereus BDRD-Cer4]
 gi|29893834|gb|AAP07126.1| Cytosine deaminase [Bacillus cereus ATCC 14579]
 gi|228657922|gb|EEL13726.1| hypothetical protein bcere0015_100 [Bacillus cereus BDRD-Cer4]
          Length = 166

 Score =  230 bits (589), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 61/151 (40%), Positives = 87/151 (57%), Gaps = 2/151 (1%)

Query: 1   MKKGN--VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           M++     FM  A+EEA+ A    E+P+GAV VL+ ++IS A N     +   AHAE+LA
Sbjct: 1   MEQDQDIYFMQLAIEEAKKAEEIQEVPIGAVIVLDGEVISVAHNLRETEQRSIAHAELLA 60

Query: 59  IRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
           I   C+ L    L +  LYVTLEPC MCA  I L+R++R+ YGAS+PKGG         T
Sbjct: 61  IDDACKKLGTWRLEDATLYVTLEPCPMCAGGIVLSRVKRVVYGASDPKGGCAGTLMNLLT 120

Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
               +H  E+  G+ E+    ++ +FF+E R
Sbjct: 121 DERFNHQCEVVSGVLEEECGTLLTNFFRELR 151


>gi|308187798|ref|YP_003931929.1| tRNA-specific adenosine deaminase [Pantoea vagans C9-1]
 gi|308058308|gb|ADO10480.1| tRNA-specific adenosine deaminase [Pantoea vagans C9-1]
          Length = 163

 Score =  230 bits (589), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 57/148 (38%), Positives = 83/148 (56%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           ++   +M  AL  A+ A  + E+PVGAV V N+++I    NR     D TAHAEI+A+R 
Sbjct: 3   QQDEYWMRHALSLARRAWEQGEVPVGAVLVQNDRVIGEGWNRPIGQHDPTAHAEIMALRQ 62

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
           G ++L    L +  LYVTLEPC MCA A+  +RI RL YGA + K G   +         
Sbjct: 63  GGKVLENYRLLDTTLYVTLEPCVMCAGAMVHSRISRLVYGAHDIKSGAAGSLLDVLGHPG 122

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H  E++ G+  +    ++ DFF+ RR
Sbjct: 123 MNHQVELHSGVLAEECAAMLSDFFRMRR 150


>gi|218283248|ref|ZP_03489309.1| hypothetical protein EUBIFOR_01897 [Eubacterium biforme DSM 3989]
 gi|218216003|gb|EEC89541.1| hypothetical protein EUBIFOR_01897 [Eubacterium biforme DSM 3989]
          Length = 158

 Score =  230 bits (589), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 59/150 (39%), Positives = 91/150 (60%), Gaps = 1/150 (0%)

Query: 1   MKKGN-VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
           M   +  +M  A+++A+ A   +E+P+G V V ++KII+R  N+   L+   AHAEI+AI
Sbjct: 1   MNMDDVKWMKEAIKQAKKAESYDEVPIGCVIVKDDKIIARGYNKRETLQQSIAHAEIMAI 60

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
           +  C+ L    L +  LYVTLEPC MCA AI  +RI+ + YGAS+PKGG +   T  + +
Sbjct: 61  QKACKKLGTWRLEDCVLYVTLEPCPMCAGAIIQSRIKEVVYGASDPKGGCVGTCTNLFEV 120

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
           +  +H P    GI E     +++ FFK++R
Sbjct: 121 SEFNHHPIYRRGILESDCSDLLKHFFKKKR 150


>gi|293367940|ref|ZP_06614578.1| tRNA-specific adenosine deaminase [Staphylococcus epidermidis
           M23864:W2(grey)]
 gi|291317969|gb|EFE58377.1| tRNA-specific adenosine deaminase [Staphylococcus epidermidis
           M23864:W2(grey)]
 gi|329737844|gb|EGG74076.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Staphylococcus epidermidis VCU045]
          Length = 168

 Score =  230 bits (588), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 57/149 (38%), Positives = 83/149 (55%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           MKK + +M  A+ EA  A    E+P+GAV V   ++I+RA N    L+  TAHAE +AI 
Sbjct: 1   MKKNHDYMRLAINEAHKAKALGEVPIGAVIVKEGQVIARAHNLRETLQQPTAHAEHIAIE 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
               ++    L E  LYVTLEPC MCA  I ++RI ++ YGA++ KGG   +        
Sbjct: 61  RASEVVGSWRLEECTLYVTLEPCVMCAGTIIMSRIPKVVYGATDSKGGCSGSLMNLLEQP 120

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H   +  GI E+   ++++ FFKE R
Sbjct: 121 QFNHRATVEKGILEEECAELLRSFFKEIR 149


>gi|225575495|ref|ZP_03784105.1| hypothetical protein RUMHYD_03586 [Blautia hydrogenotrophica DSM
           10507]
 gi|225037292|gb|EEG47538.1| hypothetical protein RUMHYD_03586 [Blautia hydrogenotrophica DSM
           10507]
          Length = 183

 Score =  230 bits (588), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 52/149 (34%), Positives = 80/149 (53%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M +   +M  A+ +A+ A   +E+P+G V V + KII+R  NR    ++  +HAE+ AI+
Sbjct: 24  MTEQEKYMREAIRQAKKAWALDEVPIGCVIVFDGKIIARGYNRRNTDRNTLSHAELNAIK 83

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              + L    L    +YVTLEPC MCA AI  ARI  +  G+ NPK G   +      + 
Sbjct: 84  KASKKLGDWRLEGCTMYVTLEPCQMCAGAIVQARIDEVVIGSMNPKAGCAGSVLNLLDIP 143

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  +I  GI ++    ++ DFF+E R
Sbjct: 144 QFNHQVKITRGILQEECSALLSDFFRELR 172


>gi|282915881|ref|ZP_06323646.1| tRNA-adenosine deaminase [Staphylococcus aureus subsp. aureus D139]
 gi|283769715|ref|ZP_06342607.1| tRNA-adenosine deaminase [Staphylococcus aureus subsp. aureus H19]
 gi|282320177|gb|EFB50522.1| tRNA-adenosine deaminase [Staphylococcus aureus subsp. aureus D139]
 gi|283459862|gb|EFC06952.1| tRNA-adenosine deaminase [Staphylococcus aureus subsp. aureus H19]
          Length = 156

 Score =  230 bits (588), Expect = 5e-59,   Method: Composition-based stats.
 Identities = 56/149 (37%), Positives = 83/149 (55%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M     FM+ A+EEA+ AA   E+P+GAV   ++++I+RA N    L+  TAHAE +AI 
Sbjct: 1   MTNDIYFMTLAIEEAKKAARLGEVPIGAVITKDDEVIARAHNLRETLQQPTAHAEHIAIE 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              ++L    L    LYVTLEPC MCA  I ++RI R+ YGA +PKGG   +       +
Sbjct: 61  RAAKVLGSWRLEGCTLYVTLEPCVMCAGTIVMSRIPRVVYGADDPKGGCSGSLMNLLQQS 120

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H   +  G+ ++    ++  FFK  R
Sbjct: 121 NFNHRAIVDKGVLKEACSTLLTTFFKNLR 149


>gi|154484290|ref|ZP_02026738.1| hypothetical protein EUBVEN_02003 [Eubacterium ventriosum ATCC
           27560]
 gi|149734767|gb|EDM50684.1| hypothetical protein EUBVEN_02003 [Eubacterium ventriosum ATCC
           27560]
          Length = 178

 Score =  230 bits (588), Expect = 5e-59,   Method: Composition-based stats.
 Identities = 57/148 (38%), Positives = 84/148 (56%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           KK N +M  A+++A+ AA   E+P+G V V  +KII R  NR    K+  +HAE+ AI+ 
Sbjct: 25  KKANKYMKEAIKQAKKAASIGEVPIGCVIVYQDKIIGRGYNRRMVDKNTLSHAELNAIKK 84

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
             + L    L + +LYVT EPC MCA AI  ARI+++Y G  NPK G   +      +  
Sbjct: 85  ASKKLDDWRLDDCELYVTTEPCQMCAGAIVQARIKKVYIGCMNPKAGCAGSIMNLLQVDK 144

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H  E+  GI E+    +++DFF+  R
Sbjct: 145 FNHQVEMEKGILEEECSNLLKDFFRNLR 172


>gi|329930226|ref|ZP_08283839.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Paenibacillus sp. HGF5]
 gi|328935248|gb|EGG31729.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Paenibacillus sp. HGF5]
          Length = 164

 Score =  230 bits (588), Expect = 5e-59,   Method: Composition-based stats.
 Identities = 52/148 (35%), Positives = 75/148 (50%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           +    +M  A+ EA+ A    E+P+GAV V  ++II R  N      D TAHAE++AIR 
Sbjct: 14  ENHERWMREAIAEARKAEELGEVPIGAVIVRGDEIIGRGYNLRETTYDGTAHAEMVAIRE 73

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
             R L    L +  LYVTLEPC MCA AI  +R+ +L YG  +PK G             
Sbjct: 74  ASRHLGAWRLLDCRLYVTLEPCPMCAGAIVQSRVPQLIYGTGDPKAGCAGTLMNLLQEPR 133

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H   +  G+ ++    ++  FF+  R
Sbjct: 134 FNHRTHVVDGVLQEECASLLTQFFRRLR 161


>gi|288549944|ref|ZP_05968716.2| tRNA-specific adenosine deaminase [Enterobacter cancerogenus ATCC
           35316]
 gi|288317287|gb|EFC56225.1| tRNA-specific adenosine deaminase [Enterobacter cancerogenus ATCC
           35316]
          Length = 168

 Score =  230 bits (588), Expect = 5e-59,   Method: Composition-based stats.
 Identities = 55/148 (37%), Positives = 77/148 (52%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           +    +M  AL  AQ A    E+PVGAV V NN++I    NR     D TAHAEI+A+R 
Sbjct: 6   RDHEYWMRHALTLAQRAWEEGEVPVGAVLVHNNQVIGEGWNRPIGRHDPTAHAEIMALRQ 65

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
           G  ++    L +  LYVTLEPC MC+ A+  +RI  L +GA + K G   +         
Sbjct: 66  GGLVMQNYRLLDTTLYVTLEPCVMCSGAMVHSRIGTLVFGARDEKTGAAGSLMDVLGHPG 125

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H  +I  G+       ++ DFF+ RR
Sbjct: 126 MNHQVKIIGGVLAPECSGLLSDFFRMRR 153


>gi|157144506|ref|YP_001451825.1| tRNA-specific adenosine deaminase [Citrobacter koseri ATCC BAA-895]
 gi|157081711|gb|ABV11389.1| hypothetical protein CKO_00224 [Citrobacter koseri ATCC BAA-895]
          Length = 180

 Score =  230 bits (588), Expect = 5e-59,   Method: Composition-based stats.
 Identities = 57/147 (38%), Positives = 77/147 (52%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
               +M  AL  A+ A    E+PVGAV V NN++I    NR     D TAHAEI+A+R G
Sbjct: 20  SHEYWMRHALTLAKRAWDEREVPVGAVLVHNNRVIGEGWNRPIGHHDPTAHAEIMALRQG 79

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
             +L    L +  LYVTLEPC MCA A+  +RI R+ +GA + K G   +          
Sbjct: 80  GLVLQNYRLLDTTLYVTLEPCVMCAGAMVHSRIGRVVFGARDAKTGAAGSLMDVLHHPGM 139

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H  EI  G+       ++ DFF+ RR
Sbjct: 140 NHRVEITEGVLRDECAALLSDFFRMRR 166


>gi|228898775|ref|ZP_04063059.1| hypothetical protein bthur0014_110 [Bacillus thuringiensis IBL
           4222]
 gi|228860867|gb|EEN05243.1| hypothetical protein bthur0014_110 [Bacillus thuringiensis IBL
           4222]
          Length = 166

 Score =  230 bits (588), Expect = 5e-59,   Method: Composition-based stats.
 Identities = 61/151 (40%), Positives = 87/151 (57%), Gaps = 2/151 (1%)

Query: 1   MKKGN--VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           M++     FM  A+EEA+ A    E+P+GAV VL+ ++IS A N     +   AHAE+LA
Sbjct: 1   MEQDRDIYFMQLAIEEAKKAEEIQEVPIGAVIVLDGEVISVAHNLRETEQRSIAHAELLA 60

Query: 59  IRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
           I   C+ L    L +  LYVTLEPC MCA  I L+R++R+ YGAS+PKGG         T
Sbjct: 61  IDEACKKLGTWRLEDATLYVTLEPCPMCAGGIVLSRVKRVVYGASDPKGGCAGTLMNLLT 120

Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
               +H  E+  G+ E+    ++ +FF+E R
Sbjct: 121 DERFNHQCEVVTGVLEEECGTLLTNFFRELR 151


>gi|229113696|ref|ZP_04243133.1| Uncharacterized deaminase yaaJ [Bacillus cereus Rock1-3]
 gi|228669762|gb|EEL25167.1| Uncharacterized deaminase yaaJ [Bacillus cereus Rock1-3]
          Length = 166

 Score =  230 bits (588), Expect = 5e-59,   Method: Composition-based stats.
 Identities = 61/151 (40%), Positives = 87/151 (57%), Gaps = 2/151 (1%)

Query: 1   MKKGN--VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           M++     FM  A+EEA+ A    E+P+GAV VL+ ++IS A N     +   AHAE+LA
Sbjct: 1   MEQDQDIYFMQLAIEEAKKAEEIQEVPIGAVIVLDGEVISVAHNLRETEQRSIAHAELLA 60

Query: 59  IRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
           I   C+ L    L +  LYVTLEPC MCA  I L+R++R+ YGAS+PKGG         T
Sbjct: 61  IDEACKNLGTWRLEDATLYVTLEPCPMCAGGIVLSRVKRVVYGASDPKGGCAGTLMNLLT 120

Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
               +H  E+  G+ E+    ++ +FF+E R
Sbjct: 121 DERFNHQCEVVTGVLEEECGTLLTNFFRELR 151


>gi|56418551|ref|YP_145869.1| hypothetical protein GK0016 [Geobacillus kaustophilus HTA426]
 gi|261417515|ref|YP_003251197.1| CMP/dCMP deaminase zinc-binding protein [Geobacillus sp. Y412MC61]
 gi|297528391|ref|YP_003669666.1| CMP/dCMP deaminase zinc-binding protein [Geobacillus sp. C56-T3]
 gi|319765173|ref|YP_004130674.1| CMP/dCMP deaminase zinc-binding protein [Geobacillus sp. Y412MC52]
 gi|56378393|dbj|BAD74301.1| hypothetical conserved protein [Geobacillus kaustophilus HTA426]
 gi|261373972|gb|ACX76715.1| CMP/dCMP deaminase zinc-binding protein [Geobacillus sp. Y412MC61]
 gi|297251643|gb|ADI25089.1| CMP/dCMP deaminase zinc-binding protein [Geobacillus sp. C56-T3]
 gi|317110039|gb|ADU92531.1| CMP/dCMP deaminase zinc-binding protein [Geobacillus sp. Y412MC52]
          Length = 165

 Score =  230 bits (588), Expect = 5e-59,   Method: Composition-based stats.
 Identities = 56/149 (37%), Positives = 78/149 (52%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M     +M  A+EEA+ A    E+P+GAV V + ++I+RA N     +   AHAEILAI 
Sbjct: 1   MNTDEYYMRLAMEEAKKAEQIGEVPIGAVIVQDGRVIARAHNLRETEQRAIAHAEILAID 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
             CR      L    LYVTLEPC MCA AI L+RI R+ +GA +PKGG           +
Sbjct: 61  EACRATGSWRLERATLYVTLEPCAMCAGAIVLSRIERVVFGAFDPKGGCAGTLMNLLQES 120

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  ++  G+       ++  FF+  R
Sbjct: 121 RFNHQVKVVSGVLADECGSLLSQFFRRLR 149


>gi|238917935|ref|YP_002931452.1| hypothetical protein EUBELI_02023 [Eubacterium eligens ATCC 27750]
 gi|238873295|gb|ACR73005.1| Hypothetical protein EUBELI_02023 [Eubacterium eligens ATCC 27750]
          Length = 176

 Score =  230 bits (588), Expect = 5e-59,   Method: Composition-based stats.
 Identities = 58/148 (39%), Positives = 78/148 (52%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           K    +M  A+ +A+ A   NE+P+G V V   K+I R  NR    K    HAEI AI+ 
Sbjct: 15  KDDYRYMKQAITQAKKAYKLNEVPIGCVIVYEGKVIGRGYNRRNTDKTSLGHAEITAIKK 74

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
             R ++   L    LYVTLEPC MCA AI  ARI R+  G+ NPK G   +      + T
Sbjct: 75  ASRYMNDWRLENCTLYVTLEPCQMCAGAIVQARIPRVVIGSMNPKAGCAGSILNILQIPT 134

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H  EI  G+ E+   +++  FFKE R
Sbjct: 135 FNHQCEITKGVCEEECSEMLTTFFKELR 162


>gi|269797481|ref|YP_003311381.1| CMP/dCMP deaminase zinc-binding protein [Veillonella parvula DSM
           2008]
 gi|269094110|gb|ACZ24101.1| CMP/dCMP deaminase zinc-binding protein [Veillonella parvula DSM
           2008]
          Length = 169

 Score =  230 bits (587), Expect = 6e-59,   Method: Composition-based stats.
 Identities = 70/148 (47%), Positives = 88/148 (59%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
            +   FM  ALEEA  A    EIP+GA+ V NN IISR  NR     D TAHAE+L IR 
Sbjct: 5   SRDEYFMGFALEEAHKAYALGEIPIGAILVQNNTIISRHHNRRELDHDATAHAEVLVIRE 64

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
            C +L +  L    LYVT+EPC MCA AI  +RI R+ YGAS+ KGG +E+     +   
Sbjct: 65  ACDVLKRWRLTGCTLYVTIEPCPMCAGAIINSRIDRVVYGASDYKGGAVESLFNVLSHPG 124

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H PE+  G+      QI++DFFKERR
Sbjct: 125 LNHEPELASGVLGDECSQIMKDFFKERR 152


>gi|49482788|ref|YP_040012.1| deaminase [Staphylococcus aureus subsp. aureus MRSA252]
 gi|257424672|ref|ZP_05601099.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           55/2053]
 gi|257427340|ref|ZP_05603739.1| tRNA-adenosine deaminase [Staphylococcus aureus subsp. aureus
           65-1322]
 gi|257429977|ref|ZP_05606361.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           68-397]
 gi|257432678|ref|ZP_05609038.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           E1410]
 gi|257435582|ref|ZP_05611630.1| tRNA-adenosine deaminase [Staphylococcus aureus subsp. aureus M876]
 gi|282903146|ref|ZP_06311037.1| cytidine/deoxycytidylate deaminase family protein [Staphylococcus
           aureus subsp. aureus C160]
 gi|282904936|ref|ZP_06312794.1| tRNA-adenosine deaminase [Staphylococcus aureus subsp. aureus
           Btn1260]
 gi|282907886|ref|ZP_06315721.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus
           WW2703/97]
 gi|282910199|ref|ZP_06318003.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus
           WBG10049]
 gi|282913391|ref|ZP_06321180.1| cytidine/deoxycytidylate deaminase family protein [Staphylococcus
           aureus subsp. aureus M899]
 gi|282923308|ref|ZP_06330988.1| tRNA-adenosine deaminase [Staphylococcus aureus subsp. aureus C101]
 gi|283957356|ref|ZP_06374809.1| cytidine/deoxycytidylate deaminase family protein [Staphylococcus
           aureus subsp. aureus A017934/97]
 gi|293500437|ref|ZP_06666288.1| tRNA-adenosine deaminase [Staphylococcus aureus subsp. aureus
           58-424]
 gi|293509382|ref|ZP_06668093.1| tRNA-adenosine deaminase [Staphylococcus aureus subsp. aureus M809]
 gi|293523969|ref|ZP_06670656.1| cytidine/deoxycytidylate deaminase family protein [Staphylococcus
           aureus subsp. aureus M1015]
 gi|295427097|ref|ZP_06819733.1| tRNA-adenosine deaminase [Staphylococcus aureus subsp. aureus
           EMRSA16]
 gi|297590551|ref|ZP_06949190.1| tRNA-specific adenosine deaminase [Staphylococcus aureus subsp.
           aureus MN8]
 gi|49240917|emb|CAG39584.1| putative deaminase [Staphylococcus aureus subsp. aureus MRSA252]
 gi|257272242|gb|EEV04365.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           55/2053]
 gi|257275533|gb|EEV07006.1| tRNA-adenosine deaminase [Staphylococcus aureus subsp. aureus
           65-1322]
 gi|257279174|gb|EEV09775.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           68-397]
 gi|257282093|gb|EEV12228.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           E1410]
 gi|257284773|gb|EEV14892.1| tRNA-adenosine deaminase [Staphylococcus aureus subsp. aureus M876]
 gi|282314176|gb|EFB44566.1| tRNA-adenosine deaminase [Staphylococcus aureus subsp. aureus C101]
 gi|282322423|gb|EFB52745.1| cytidine/deoxycytidylate deaminase family protein [Staphylococcus
           aureus subsp. aureus M899]
 gi|282325591|gb|EFB55899.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus
           WBG10049]
 gi|282328270|gb|EFB58548.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus
           WW2703/97]
 gi|282331761|gb|EFB61272.1| tRNA-adenosine deaminase [Staphylococcus aureus subsp. aureus
           Btn1260]
 gi|282596101|gb|EFC01062.1| cytidine/deoxycytidylate deaminase family protein [Staphylococcus
           aureus subsp. aureus C160]
 gi|283790807|gb|EFC29622.1| cytidine/deoxycytidylate deaminase family protein [Staphylococcus
           aureus subsp. aureus A017934/97]
 gi|290920932|gb|EFD97993.1| cytidine/deoxycytidylate deaminase family protein [Staphylococcus
           aureus subsp. aureus M1015]
 gi|291095442|gb|EFE25703.1| tRNA-adenosine deaminase [Staphylococcus aureus subsp. aureus
           58-424]
 gi|291467479|gb|EFF09994.1| tRNA-adenosine deaminase [Staphylococcus aureus subsp. aureus M809]
 gi|295128885|gb|EFG58515.1| tRNA-adenosine deaminase [Staphylococcus aureus subsp. aureus
           EMRSA16]
 gi|297576850|gb|EFH95565.1| tRNA-specific adenosine deaminase [Staphylococcus aureus subsp.
           aureus MN8]
 gi|312439022|gb|ADQ78093.1| tRNA-specific adenosine deaminase [Staphylococcus aureus subsp.
           aureus TCH60]
 gi|315193922|gb|EFU24316.1| putative deaminase [Staphylococcus aureus subsp. aureus CGS00]
          Length = 156

 Score =  230 bits (587), Expect = 6e-59,   Method: Composition-based stats.
 Identities = 55/149 (36%), Positives = 84/149 (56%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M     FM+ A+EEA+ AA   E+P+GA+   ++++I+RA N    L+  TAHAE +AI 
Sbjct: 1   MTNDIYFMTLAIEEAKKAAQLGEVPIGAIITKDDEVIARAHNLRETLQQPTAHAEHIAIE 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              ++L    L +  LYVTLEPC MCA  I ++RI R+ YGA +PKGG   +       +
Sbjct: 61  RAAKVLGSWRLEDCTLYVTLEPCVMCAGTIVMSRIPRVVYGADDPKGGCSGSLMNLLQQS 120

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H   +  G+ ++    ++  FFK  R
Sbjct: 121 NFNHRAIVDKGVLKEACSTLLTTFFKNLR 149


>gi|330686241|gb|EGG97853.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Staphylococcus epidermidis VCU121]
          Length = 168

 Score =  230 bits (587), Expect = 6e-59,   Method: Composition-based stats.
 Identities = 57/149 (38%), Positives = 88/149 (59%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M+    +M  A+EEA+ A L  E+P+GA+ V NN +I+RA N    L+  TAHAE LAI 
Sbjct: 1   METDEYYMKIAIEEAKKAELLGEVPIGAIIVKNNHVIARAHNMRETLQQPTAHAEHLAIE 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              ++L    L +  LYVTLEPC MCA  I ++RI  + YGA++PKGG   +        
Sbjct: 61  RAAKVLGSWRLEDCTLYVTLEPCVMCAGTIVMSRIPYIKYGAADPKGGCSGSLMNLLNQP 120

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  ++  G+ E++   ++++FF++ R
Sbjct: 121 DFNHRAQVESGLLEEQCGDLLRNFFRKLR 149


>gi|228905818|ref|ZP_04069717.1| hypothetical protein bthur0013_110 [Bacillus thuringiensis IBL 200]
 gi|228853826|gb|EEM98584.1| hypothetical protein bthur0013_110 [Bacillus thuringiensis IBL 200]
          Length = 166

 Score =  230 bits (587), Expect = 6e-59,   Method: Composition-based stats.
 Identities = 61/151 (40%), Positives = 87/151 (57%), Gaps = 2/151 (1%)

Query: 1   MKKGN--VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           M++     FM  A+EEA+ A    E+P+GAV VL+ ++IS A N     +   AHAE+LA
Sbjct: 1   MEQDRDIYFMQLAIEEAKKAEEIQEVPIGAVIVLDGEVISVAHNLRETEQRSIAHAELLA 60

Query: 59  IRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
           I   C+ L    L +  LYVTLEPC MCA  I L+R++R+ YGAS+PKGG         T
Sbjct: 61  IDEACKKLGTWRLEDATLYVTLEPCPMCAGGIVLSRVKRVVYGASDPKGGCAGTLMNLLT 120

Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
               +H  E+  G+ E+    ++ +FF+E R
Sbjct: 121 DERFNHQCEVVTGVLEEECGTLLTNFFRELR 151


>gi|238922727|ref|YP_002936240.1| cytidine and deoxycytidylate deaminase family protein [Eubacterium
           rectale ATCC 33656]
 gi|238874399|gb|ACR74106.1| cytidine and deoxycytidylate deaminase family protein [Eubacterium
           rectale ATCC 33656]
          Length = 162

 Score =  230 bits (587), Expect = 7e-59,   Method: Composition-based stats.
 Identities = 56/149 (37%), Positives = 78/149 (52%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M +   +M  A+++A+ A   +E+P+G V V  +KII+R  NR    K+  AHAE+ AIR
Sbjct: 6   MTQDEKYMKQAIKQAKKAYALDEVPIGCVIVAGDKIIARGYNRRNTDKNPLAHAELSAIR 65

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              +      L E  +YVTLEPC MCA AI  ARI R+  GA NPK G   +      + 
Sbjct: 66  KASKKTGDWRLEECTMYVTLEPCQMCAGAIVQARIPRVVIGAMNPKAGCAGSIINLLQMQ 125

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  +   GI       ++  FFKE R
Sbjct: 126 QFNHQVQTDIGICGDECSTMLSTFFKELR 154


>gi|239637751|ref|ZP_04678718.1| tRNA-specific adenosine deaminase [Staphylococcus warneri L37603]
 gi|239596653|gb|EEQ79183.1| tRNA-specific adenosine deaminase [Staphylococcus warneri L37603]
          Length = 168

 Score =  230 bits (587), Expect = 7e-59,   Method: Composition-based stats.
 Identities = 54/149 (36%), Positives = 87/149 (58%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M+    +M  A++EA+ A L  E+P+GA+ V N  +I+RA N    ++  TAHAE LAI 
Sbjct: 1   METDEYYMKLAIQEAKKAELLGEVPIGAIIVKNGHVIARAHNLRETMQQPTAHAEHLAIE 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              ++L    L +  LYVTLEPC MCA  I ++RI  + YGA++PKGG   +        
Sbjct: 61  RAAKVLGSWRLEDCTLYVTLEPCVMCAGTIVMSRIPYIKYGAADPKGGCSGSLMNLLNQP 120

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  ++  G+ E++   ++++FF++ R
Sbjct: 121 DFNHRAQVESGLLEEQCGDLLRNFFRKLR 149


>gi|88192205|pdb|2B3J|A Chain A, Crystal Structure Of Staphylococcus Aureus Trna Adenosine
           Deaminase, Tada, In Complex With Rna
 gi|88192206|pdb|2B3J|B Chain B, Crystal Structure Of Staphylococcus Aureus Trna Adenosine
           Deaminase, Tada, In Complex With Rna
 gi|88192207|pdb|2B3J|C Chain C, Crystal Structure Of Staphylococcus Aureus Trna Adenosine
           Deaminase, Tada, In Complex With Rna
 gi|88192208|pdb|2B3J|D Chain D, Crystal Structure Of Staphylococcus Aureus Trna Adenosine
           Deaminase, Tada, In Complex With Rna
          Length = 159

 Score =  230 bits (587), Expect = 7e-59,   Method: Composition-based stats.
 Identities = 55/149 (36%), Positives = 83/149 (55%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M     FM+ A+EEA+ AA   E+P+GA+   ++++I+RA N    L+  TAHAE +AI 
Sbjct: 4   MTNDIYFMTLAIEEAKKAAQLGEVPIGAIITKDDEVIARAHNLRETLQQPTAHAEHIAIE 63

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              ++L    L    LYVTLEPC MCA  I ++RI R+ YGA +PKGG   +       +
Sbjct: 64  RAAKVLGSWRLEGCTLYVTLEPCVMCAGTIVMSRIPRVVYGADDPKGGCSGSLMNLLQQS 123

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H   +  G+ ++    ++  FFK  R
Sbjct: 124 NFNHRAIVDKGVLKEACSTLLTTFFKNLR 152


>gi|15923548|ref|NP_371082.1| cytosine deaminase [Staphylococcus aureus subsp. aureus Mu50]
 gi|15926236|ref|NP_373769.1| hypothetical protein SA0516 [Staphylococcus aureus subsp. aureus
           N315]
 gi|21282242|ref|NP_645330.1| hypothetical protein MW0513 [Staphylococcus aureus subsp. aureus
           MW2]
 gi|49485423|ref|YP_042644.1| putative deaminase [Staphylococcus aureus subsp. aureus MSSA476]
 gi|87160687|ref|YP_493246.1| putative deaminase [Staphylococcus aureus subsp. aureus
           USA300_FPR3757]
 gi|88194321|ref|YP_499113.1| hypothetical protein SAOUHSC_00541 [Staphylococcus aureus subsp.
           aureus NCTC 8325]
 gi|148267018|ref|YP_001245961.1| CMP/dCMP deaminase, zinc-binding [Staphylococcus aureus subsp.
           aureus JH9]
 gi|150393065|ref|YP_001315740.1| CMP/dCMP deaminase zinc-binding [Staphylococcus aureus subsp.
           aureus JH1]
 gi|151220732|ref|YP_001331554.1| hypothetical protein NWMN_0520 [Staphylococcus aureus subsp. aureus
           str. Newman]
 gi|156978887|ref|YP_001441146.1| hypothetical protein SAHV_0556 [Staphylococcus aureus subsp. aureus
           Mu3]
 gi|161508798|ref|YP_001574457.1| deaminase [Staphylococcus aureus subsp. aureus USA300_TCH1516]
 gi|221141004|ref|ZP_03565497.1| deaminase [Staphylococcus aureus subsp. aureus str. JKD6009]
 gi|253315668|ref|ZP_04838881.1| putative deaminase [Staphylococcus aureus subsp. aureus str.
           CF-Marseille]
 gi|253732567|ref|ZP_04866732.1| deaminase [Staphylococcus aureus subsp. aureus TCH130]
 gi|255005352|ref|ZP_05143953.2| putative deaminase [Staphylococcus aureus subsp. aureus Mu50-omega]
 gi|257795343|ref|ZP_05644322.1| deaminase [Staphylococcus aureus A9781]
 gi|258408970|ref|ZP_05681251.1| deaminase [Staphylococcus aureus A9763]
 gi|258420392|ref|ZP_05683335.1| tRNA-adenosine deaminase [Staphylococcus aureus A9719]
 gi|258422595|ref|ZP_05685501.1| CMP/dCMP deaminase, zinc-binding [Staphylococcus aureus A9635]
 gi|258439312|ref|ZP_05690244.1| cytosine deaminase [Staphylococcus aureus A9299]
 gi|258444052|ref|ZP_05692389.1| tRNA-adenosine deaminase [Staphylococcus aureus A8115]
 gi|258446321|ref|ZP_05694479.1| CMP/dCMP deaminase zinc-binding [Staphylococcus aureus A6300]
 gi|258448414|ref|ZP_05696529.1| deaminase [Staphylococcus aureus A6224]
 gi|258452708|ref|ZP_05700706.1| conserved hypothetical protein [Staphylococcus aureus A5948]
 gi|258453770|ref|ZP_05701744.1| cytosine deaminase [Staphylococcus aureus A5937]
 gi|262049601|ref|ZP_06022470.1| hypothetical protein SAD30_0395 [Staphylococcus aureus D30]
 gi|262052438|ref|ZP_06024638.1| hypothetical protein SA930_0274 [Staphylococcus aureus 930918-3]
 gi|269202181|ref|YP_003281450.1| putative tRNA-specific adenosine deaminase [Staphylococcus aureus
           subsp. aureus ED98]
 gi|282894994|ref|ZP_06303217.1| tRNA-adenosine deaminase [Staphylococcus aureus A8117]
 gi|282924473|ref|ZP_06332145.1| tRNA-adenosine deaminase [Staphylococcus aureus A9765]
 gi|282928896|ref|ZP_06336487.1| tRNA-adenosine deaminase [Staphylococcus aureus A10102]
 gi|294850335|ref|ZP_06791069.1| tRNA-adenosine deaminase [Staphylococcus aureus A9754]
 gi|295406935|ref|ZP_06816738.1| tRNA-adenosine deaminase [Staphylococcus aureus A8819]
 gi|297208728|ref|ZP_06925156.1| tRNA-specific adenosine deaminase [Staphylococcus aureus subsp.
           aureus ATCC 51811]
 gi|297246241|ref|ZP_06930090.1| tRNA-adenosine deaminase [Staphylococcus aureus A8796]
 gi|300912818|ref|ZP_07130260.1| tRNA-specific adenosine deaminase [Staphylococcus aureus subsp.
           aureus TCH70]
 gi|304381843|ref|ZP_07364490.1| tRNA-specific adenosine deaminase [Staphylococcus aureus subsp.
           aureus ATCC BAA-39]
 gi|13700450|dbj|BAB41747.1| SA0516 [Staphylococcus aureus subsp. aureus N315]
 gi|14246326|dbj|BAB56720.1| similar to cytosine deaminase [Staphylococcus aureus subsp. aureus
           Mu50]
 gi|21203678|dbj|BAB94378.1| MW0513 [Staphylococcus aureus subsp. aureus MW2]
 gi|49243866|emb|CAG42291.1| putative deaminase [Staphylococcus aureus subsp. aureus MSSA476]
 gi|87126661|gb|ABD21175.1| putative deaminase [Staphylococcus aureus subsp. aureus
           USA300_FPR3757]
 gi|87201879|gb|ABD29689.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           NCTC 8325]
 gi|147740087|gb|ABQ48385.1| tRNA-adenosine deaminase [Staphylococcus aureus subsp. aureus JH9]
 gi|149945517|gb|ABR51453.1| CMP/dCMP deaminase zinc-binding [Staphylococcus aureus subsp.
           aureus JH1]
 gi|150373532|dbj|BAF66792.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           str. Newman]
 gi|156721022|dbj|BAF77439.1| hypothetical protein [Staphylococcus aureus subsp. aureus Mu3]
 gi|160367607|gb|ABX28578.1| deaminase [Staphylococcus aureus subsp. aureus USA300_TCH1516]
 gi|253729496|gb|EES98225.1| deaminase [Staphylococcus aureus subsp. aureus TCH130]
 gi|257789315|gb|EEV27655.1| deaminase [Staphylococcus aureus A9781]
 gi|257840321|gb|EEV64784.1| deaminase [Staphylococcus aureus A9763]
 gi|257843582|gb|EEV67988.1| tRNA-adenosine deaminase [Staphylococcus aureus A9719]
 gi|257847167|gb|EEV71175.1| CMP/dCMP deaminase, zinc-binding [Staphylococcus aureus A9635]
 gi|257847649|gb|EEV71648.1| cytosine deaminase [Staphylococcus aureus A9299]
 gi|257850722|gb|EEV74667.1| tRNA-adenosine deaminase [Staphylococcus aureus A8115]
 gi|257854915|gb|EEV77860.1| CMP/dCMP deaminase zinc-binding [Staphylococcus aureus A6300]
 gi|257858283|gb|EEV81170.1| deaminase [Staphylococcus aureus A6224]
 gi|257859581|gb|EEV82431.1| conserved hypothetical protein [Staphylococcus aureus A5948]
 gi|257864026|gb|EEV86780.1| cytosine deaminase [Staphylococcus aureus A5937]
 gi|259159684|gb|EEW44728.1| hypothetical protein SA930_0274 [Staphylococcus aureus 930918-3]
 gi|259162341|gb|EEW46914.1| hypothetical protein SAD30_0395 [Staphylococcus aureus D30]
 gi|262074471|gb|ACY10444.1| putative tRNA-specific adenosine deaminase [Staphylococcus aureus
           subsp. aureus ED98]
 gi|269940131|emb|CBI48507.1| putative deaminase [Staphylococcus aureus subsp. aureus TW20]
 gi|282589504|gb|EFB94593.1| tRNA-adenosine deaminase [Staphylococcus aureus A10102]
 gi|282592884|gb|EFB97888.1| tRNA-adenosine deaminase [Staphylococcus aureus A9765]
 gi|282762676|gb|EFC02813.1| tRNA-adenosine deaminase [Staphylococcus aureus A8117]
 gi|285816259|gb|ADC36746.1| tRNA-specific adenosine-34 deaminase [Staphylococcus aureus
           04-02981]
 gi|294822847|gb|EFG39282.1| tRNA-adenosine deaminase [Staphylococcus aureus A9754]
 gi|294968166|gb|EFG44192.1| tRNA-adenosine deaminase [Staphylococcus aureus A8819]
 gi|296886673|gb|EFH25578.1| tRNA-specific adenosine deaminase [Staphylococcus aureus subsp.
           aureus ATCC 51811]
 gi|297176839|gb|EFH36097.1| tRNA-adenosine deaminase [Staphylococcus aureus A8796]
 gi|300885922|gb|EFK81125.1| tRNA-specific adenosine deaminase [Staphylococcus aureus subsp.
           aureus TCH70]
 gi|302332271|gb|ADL22464.1| tRNA-specific adenosine deaminase [Staphylococcus aureus subsp.
           aureus JKD6159]
 gi|302750450|gb|ADL64627.1| tRNA-specific adenosine deaminase [Staphylococcus aureus subsp.
           aureus str. JKD6008]
 gi|304339629|gb|EFM05576.1| tRNA-specific adenosine deaminase [Staphylococcus aureus subsp.
           aureus ATCC BAA-39]
 gi|312829054|emb|CBX33896.1| cytidine and deoxycytidylate deaminase zinc-binding region family
           protein [Staphylococcus aureus subsp. aureus ECT-R 2]
 gi|315128851|gb|EFT84850.1| deaminase [Staphylococcus aureus subsp. aureus CGS03]
 gi|315196629|gb|EFU26976.1| deaminase [Staphylococcus aureus subsp. aureus CGS01]
 gi|320141577|gb|EFW33416.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Staphylococcus aureus subsp. aureus MRSA131]
 gi|320141794|gb|EFW33622.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Staphylococcus aureus subsp. aureus MRSA177]
 gi|323439830|gb|EGA97547.1| putative deaminase [Staphylococcus aureus O11]
 gi|323443069|gb|EGB00689.1| putative deaminase [Staphylococcus aureus O46]
 gi|329313279|gb|AEB87692.1| tRNA-adenosine deaminase [Staphylococcus aureus subsp. aureus
           T0131]
 gi|329727928|gb|EGG64377.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Staphylococcus aureus subsp. aureus 21172]
 gi|329731027|gb|EGG67400.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Staphylococcus aureus subsp. aureus 21189]
 gi|329731987|gb|EGG68343.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Staphylococcus aureus subsp. aureus 21193]
          Length = 156

 Score =  230 bits (587), Expect = 7e-59,   Method: Composition-based stats.
 Identities = 55/149 (36%), Positives = 83/149 (55%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M     FM+ A+EEA+ AA   E+P+GA+   ++++I+RA N    L+  TAHAE +AI 
Sbjct: 1   MTNDIYFMTLAIEEAKKAAQLGEVPIGAIITKDDEVIARAHNLRETLQQPTAHAEHIAIE 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              ++L    L    LYVTLEPC MCA  I ++RI R+ YGA +PKGG   +       +
Sbjct: 61  RAAKVLGSWRLEGCTLYVTLEPCVMCAGTIVMSRIPRVVYGADDPKGGCSGSLMNLLQQS 120

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H   +  G+ ++    ++  FFK  R
Sbjct: 121 NFNHRAIVDKGVLKEACSTLLTTFFKNLR 149


>gi|261403958|ref|YP_003240199.1| CMP/dCMP deaminase zinc-binding protein [Paenibacillus sp.
           Y412MC10]
 gi|261280421|gb|ACX62392.1| CMP/dCMP deaminase zinc-binding protein [Paenibacillus sp.
           Y412MC10]
          Length = 164

 Score =  229 bits (586), Expect = 8e-59,   Method: Composition-based stats.
 Identities = 52/148 (35%), Positives = 75/148 (50%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           +    +M  A+ EA+ A    E+P+GAV V  ++II R  N      D TAHAE++AIR 
Sbjct: 14  ENHERWMREAIAEARKAEELGEVPIGAVIVRGDEIIGRGYNLRETTYDGTAHAEMVAIRE 73

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
             R L    L +  LYVTLEPC MCA AI  +R+ +L YG  +PK G             
Sbjct: 74  ASRHLGAWRLLDCRLYVTLEPCPMCAGAIVQSRVPQLIYGTGDPKAGCAGTLMNLLQEPR 133

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H   +  G+ ++    ++  FF+  R
Sbjct: 134 FNHRTHVVDGVLQEECASLLTQFFRRLR 161


>gi|218895158|ref|YP_002443569.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein
           [Bacillus cereus G9842]
 gi|218541226|gb|ACK93620.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein
           [Bacillus cereus G9842]
          Length = 166

 Score =  229 bits (586), Expect = 8e-59,   Method: Composition-based stats.
 Identities = 61/151 (40%), Positives = 87/151 (57%), Gaps = 2/151 (1%)

Query: 1   MKKGN--VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           M++     FM  A+EEA+ A    E+P+GAV VL+ ++IS A N     +   AHAE+LA
Sbjct: 1   MEQDRDIYFMQLAIEEAKKAEEMQEVPIGAVIVLDGEVISVAHNLRETEQRSIAHAELLA 60

Query: 59  IRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
           I   C+ L    L +  LYVTLEPC MCA  I L+R++R+ YGAS+PKGG         T
Sbjct: 61  IDEACKKLGTWRLEDATLYVTLEPCPMCAGGIVLSRVKRVVYGASDPKGGCAGTLMNLLT 120

Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
               +H  E+  G+ E+    ++ +FF+E R
Sbjct: 121 DERFNHQCEVVTGVLEEECGTLLTNFFRELR 151


>gi|237732543|ref|ZP_04563024.1| tRNA-specific adenosine deaminase [Citrobacter sp. 30_2]
 gi|226908082|gb|EEH94000.1| tRNA-specific adenosine deaminase [Citrobacter sp. 30_2]
          Length = 182

 Score =  229 bits (586), Expect = 8e-59,   Method: Composition-based stats.
 Identities = 56/147 (38%), Positives = 77/147 (52%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
               +M  AL  A+ A    E+PVGAV V NN++I    NR     D TAHAEI+A+R G
Sbjct: 24  SHEYWMRHALTLAKRAWDEREVPVGAVLVHNNRVIGEGWNRPIGHHDPTAHAEIMALRQG 83

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
             +L    L +  LYVTLEPC MCA A+  +RI R+ +GA + K G   +          
Sbjct: 84  GLVLQNYRLLDATLYVTLEPCVMCAGAMVHSRIGRVVFGARDAKTGAAGSLMDVLHHPGM 143

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H  E+  G+       ++ DFF+ RR
Sbjct: 144 NHRVEVTEGVLRDECATLLSDFFRMRR 170


>gi|295402713|ref|ZP_06812655.1| CMP/dCMP deaminase zinc-binding [Geobacillus thermoglucosidasius
           C56-YS93]
 gi|312109168|ref|YP_003987484.1| CMP/dCMP deaminase zinc-binding protein [Geobacillus sp. Y4.1MC1]
 gi|294975244|gb|EFG50880.1| CMP/dCMP deaminase zinc-binding [Geobacillus thermoglucosidasius
           C56-YS93]
 gi|311214269|gb|ADP72873.1| CMP/dCMP deaminase zinc-binding protein [Geobacillus sp. Y4.1MC1]
          Length = 161

 Score =  229 bits (586), Expect = 8e-59,   Method: Composition-based stats.
 Identities = 58/149 (38%), Positives = 83/149 (55%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M     +M  A+EEA+ A    E+P+GA+ V    +I+RA N     +   AHAEILAI 
Sbjct: 1   MVNDEYYMRLAIEEAKQAEQIGEVPIGAIIVQGGNVIARAHNLRETAQRAIAHAEILAID 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
             C+      L +  LYVTLEPC MCA AI LARI+R+ +GAS+PKGG            
Sbjct: 61  EACKKAGSWRLEDATLYVTLEPCAMCAGAIVLARIKRVVFGASDPKGGCAGTLMNLLQEG 120

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  E+  G+ ++   Q++ +FF++ R
Sbjct: 121 RFNHQAEVIGGVLQEECGQMLSNFFRKLR 149


>gi|299542082|ref|ZP_07052398.1| hypothetical protein BFZC1_24048 [Lysinibacillus fusiformis ZC1]
 gi|298725397|gb|EFI66045.1| hypothetical protein BFZC1_24048 [Lysinibacillus fusiformis ZC1]
          Length = 171

 Score =  229 bits (586), Expect = 9e-59,   Method: Composition-based stats.
 Identities = 61/146 (41%), Positives = 84/146 (57%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
             +FM  ALEEAQ AAL  E+P+GAV V   KII+RA N     ++ T HAE+L I+  C
Sbjct: 7   DRLFMKQALEEAQQAALLGEVPIGAVLVYEGKIIARAHNLRETTQNATTHAELLVIQEAC 66

Query: 64  RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123
           + +    L +  LYVTLEPC MCA AI  +R+ R+ YGA + K G +++          +
Sbjct: 67  KKIGSWRLEDTTLYVTLEPCPMCAGAILQSRVPRVVYGARDQKAGCVDSLYHLLNDERFN 126

Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149
           H  ++  GI  +   QI+ DFFK  R
Sbjct: 127 HDCDVTEGILAEECGQILTDFFKALR 152


>gi|163791639|ref|ZP_02186036.1| cytidine/deoxycytidylate deaminase family protein [Carnobacterium
           sp. AT7]
 gi|159873088|gb|EDP67195.1| cytidine/deoxycytidylate deaminase family protein [Carnobacterium
           sp. AT7]
          Length = 174

 Score =  229 bits (586), Expect = 9e-59,   Method: Composition-based stats.
 Identities = 63/149 (42%), Positives = 87/149 (58%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +++   FM  A++EA  A  + E+P+GAV VLN KII R  N   E  D T HAE+LAI+
Sbjct: 4   IEEKTYFMQEAIKEAHKAKEKLEVPIGAVVVLNGKIIGRGHNIREESNDATTHAEMLAIQ 63

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              R L    L E  L+VTLEPC MC+ A+ L+RI+ LYYGAS+PKGG            
Sbjct: 64  EANRYLGNWRLEETQLFVTLEPCPMCSGAMILSRIKELYYGASDPKGGTAGTLMNLLDDN 123

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  +I  G+ E+    ++ +FF+E R
Sbjct: 124 RFNHQVQIEKGLLEEECSDLLSNFFRELR 152


>gi|311070665|ref|YP_003975588.1| tRNA specific adenosine deaminase [Bacillus atrophaeus 1942]
 gi|310871182|gb|ADP34657.1| tRNA specific adenosine deaminase [Bacillus atrophaeus 1942]
          Length = 161

 Score =  229 bits (586), Expect = 9e-59,   Method: Composition-based stats.
 Identities = 59/149 (39%), Positives = 84/149 (56%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M K   +M  A++EA+ A    E+P+GAV V+N+ I++RA N     +   AHAE+LAI 
Sbjct: 1   MTKDEFYMLEAIKEAKKAEEIGEVPIGAVLVMNDDIVARAHNLRETEQRSIAHAEMLAID 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
             CR L    L    LYVTLEPC MCA A+ L+R+ R+ +GA +PKGG            
Sbjct: 61  EACRTLGTWRLEGASLYVTLEPCPMCAGAVVLSRVDRVVFGAFDPKGGCSGTLMNLLQEE 120

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  E+  G+ E+   Q++ DFF+  R
Sbjct: 121 RFNHQAEVVSGVLEKECGQMLSDFFRNLR 149


>gi|293376812|ref|ZP_06623032.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Turicibacter sanguinis PC909]
 gi|325845379|ref|ZP_08168678.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Turicibacter sp. HGF1]
 gi|292644564|gb|EFF62654.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Turicibacter sanguinis PC909]
 gi|325488594|gb|EGC91004.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Turicibacter sp. HGF1]
          Length = 162

 Score =  229 bits (585), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 54/147 (36%), Positives = 80/147 (54%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
           K   +M  A+EEA+ A    E+P+GAV V + +II+R  N     +   AHAE++AI   
Sbjct: 2   KHITYMQAAIEEAKKAQNLGEVPIGAVIVKDGEIIARGYNLRETSQLSNAHAEMIAIAKA 61

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
             ++    L +  LYVTLEPC MCA AI  +RI  + +GA +PKGG           +  
Sbjct: 62  NEMVGSWRLEDCTLYVTLEPCPMCAGAIVQSRIPTVVFGAHDPKGGCCGTIYNLLDESKF 121

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H  E+  G+ E+   Q++ DFF+  R
Sbjct: 122 NHRCELVSGVLEEECGQLLSDFFRNLR 148


>gi|253731164|ref|ZP_04865329.1| deaminase [Staphylococcus aureus subsp. aureus USA300_TCH959]
 gi|253725129|gb|EES93858.1| deaminase [Staphylococcus aureus subsp. aureus USA300_TCH959]
          Length = 156

 Score =  229 bits (585), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 54/149 (36%), Positives = 83/149 (55%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M     FM+ A++EA+ AA   E+P+GA+   ++++I+RA N    L+  TAHAE +AI 
Sbjct: 1   MTNDIYFMTLAIKEAKKAAQLGEVPIGAIITKDDEVIARAHNLRETLQQPTAHAEHIAIE 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              ++L    L    LYVTLEPC MCA  I ++RI R+ YGA +PKGG   +       +
Sbjct: 61  RAAKVLGSWRLEGCTLYVTLEPCVMCAGTIVMSRIPRVVYGADDPKGGCSGSLMNLLQQS 120

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H   +  G+ ++    ++  FFK  R
Sbjct: 121 NFNHRAIVDKGVLKEACSTLLTTFFKNLR 149


>gi|296104233|ref|YP_003614379.1| tRNA-specific adenosine deaminase [Enterobacter cloacae subsp.
           cloacae ATCC 13047]
 gi|295058692|gb|ADF63430.1| tRNA-specific adenosine deaminase [Enterobacter cloacae subsp.
           cloacae ATCC 13047]
          Length = 168

 Score =  229 bits (585), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 54/147 (36%), Positives = 75/147 (51%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
               +M  AL  A+ A    E+PVGAV V NN++I    NR     D TAHAEI+A+R G
Sbjct: 7   SHEYWMRHALTLARRAWDEGEVPVGAVLVHNNQVIGEGWNRPIGRHDPTAHAEIMALRQG 66

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
             +L    L +  LYVTLEPC MC+ A+  +RI  L +GA + K G   +          
Sbjct: 67  GLVLQNYRLLDTTLYVTLEPCVMCSGAMVHSRIGTLVFGARDEKTGAAGSLMDVLGHPGM 126

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H  +   G+       ++ DFF+ RR
Sbjct: 127 NHQVKTIGGVLAPECSGLLSDFFRMRR 153


>gi|260893961|ref|YP_003240058.1| CMP/dCMP deaminase zinc-binding protein [Ammonifex degensii KC4]
 gi|260866102|gb|ACX53208.1| CMP/dCMP deaminase zinc-binding protein [Ammonifex degensii KC4]
          Length = 151

 Score =  229 bits (585), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 62/142 (43%), Positives = 84/142 (59%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  AL EA+ A +R E+PVGAVAVLN +II R  N    LKD TAHAEILA+R   + + 
Sbjct: 1   MREALSEAEKAYVRGEVPVGAVAVLNGEIIGRGHNLRETLKDATAHAEILALREAAKKIG 60

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
              L EV LY TLEPC MCA A+   R++R+ +GA +PK G   +          +H  E
Sbjct: 61  DWRLEEVTLYTTLEPCPMCAGALIQFRVKRVVFGAFDPKAGAAGSVVDLLRDPRFNHQVE 120

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
           +  G+  + S  +++ FF+E R
Sbjct: 121 VVGGVLAEESGALLKRFFQELR 142


>gi|331092011|ref|ZP_08340842.1| hypothetical protein HMPREF9477_01485 [Lachnospiraceae bacterium
           2_1_46FAA]
 gi|330402212|gb|EGG81783.1| hypothetical protein HMPREF9477_01485 [Lachnospiraceae bacterium
           2_1_46FAA]
          Length = 155

 Score =  229 bits (585), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 51/149 (34%), Positives = 84/149 (56%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M +   +M  A+++A+ A   NE+P+G V V  +KIISR  NR    K+  AHAE++AI+
Sbjct: 1   MNQDEKYMREAIKQAKKAYEINEVPIGCVIVCEDKIISRGYNRRTTDKNPLAHAEMIAIK 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              + +    L +  +YVTLEPC MC+ AI  +R++++  G  N K G   +      + 
Sbjct: 61  KASKKVGDWRLEDCTMYVTLEPCQMCSGAIVQSRMKKVVVGCMNAKAGCAGSILNLLQMD 120

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  E+  G+ E+    ++++FFKE R
Sbjct: 121 EFNHQVELETGVLEEECSLLMKNFFKELR 149


>gi|255764464|ref|YP_003064771.2| Cytidine/deoxycytidylate deaminase, zinc-binding region [Candidatus
           Liberibacter asiaticus str. psy62]
 gi|254547815|gb|ACT56831.2| Cytidine/deoxycytidylate deaminase, zinc-binding region [Candidatus
           Liberibacter asiaticus str. psy62]
          Length = 149

 Score =  229 bits (585), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 149/149 (100%), Positives = 149/149 (100%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR
Sbjct: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
           MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA
Sbjct: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
           TCHHSPEIYPGISEQRSRQIIQDFFKERR
Sbjct: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149


>gi|210613778|ref|ZP_03289892.1| hypothetical protein CLONEX_02100 [Clostridium nexile DSM 1787]
 gi|210150987|gb|EEA81995.1| hypothetical protein CLONEX_02100 [Clostridium nexile DSM 1787]
          Length = 158

 Score =  229 bits (585), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 51/149 (34%), Positives = 83/149 (55%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M K   +M  A+++A+ A    E+P+G V V  +KII R  NR    K+  AHAE++AI+
Sbjct: 2   MNKDEKYMKEAIKQAKKAYALGEVPIGCVIVYEDKIIGRGYNRRTIDKNTIAHAEMMAIK 61

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              + +    L +  +YVTLEPC MC+ AI  +R++++  G  NPK G   +      + 
Sbjct: 62  KASKKMDDWRLEDCTMYVTLEPCQMCSGAIVQSRMKKVVVGCMNPKAGCAGSILNLLQME 121

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  E+  G+ E+    ++++FFKE R
Sbjct: 122 EFNHQVELEIGVLEEECSALMKNFFKELR 150


>gi|284023569|ref|ZP_06377967.1| putative tRNA-specific adenosine deaminase [Staphylococcus aureus
           subsp. aureus 132]
          Length = 156

 Score =  229 bits (584), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 55/149 (36%), Positives = 83/149 (55%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M     FM+ A+EEA+ AA   E+P+GA+   ++++I+RA N    L+  TAHAE +AI 
Sbjct: 1   MTNDIFFMTLAIEEAKKAAQLGEVPIGAIITKDDEVIARAHNLRETLQQPTAHAEHIAIE 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              ++L    L    LYVTLEPC MCA  I ++RI R+ YGA +PKGG   +       +
Sbjct: 61  RAAKVLGSWRLEGCTLYVTLEPCVMCAGTIVMSRIPRVVYGADDPKGGCSGSLMNLLQQS 120

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H   +  G+ ++    ++  FFK  R
Sbjct: 121 NFNHRAIVDKGVLKEACSTLLTTFFKNLR 149


>gi|145589597|ref|YP_001156194.1| CMP/dCMP deaminase, zinc-binding [Polynucleobacter necessarius
           subsp. asymbioticus QLW-P1DMWA-1]
 gi|145048003|gb|ABP34630.1| CMP/dCMP deaminase, zinc-binding protein [Polynucleobacter
           necessarius subsp. asymbioticus QLW-P1DMWA-1]
          Length = 152

 Score =  229 bits (584), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 59/146 (40%), Positives = 87/146 (59%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
              FM  A+E+A+ AAL  E+PVGAV V + K+IS A N+     D +AHAE+LA+R   
Sbjct: 7   DQQFMQQAIEQAKLAALAGEVPVGAVVVRDGKVISSAFNKPISTHDPSAHAEMLALRAAA 66

Query: 64  RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123
           +      LP   LYVTLEPC MC+ A+  AR+ R+ YGA++PK G   +    ++    +
Sbjct: 67  QSEENYRLPGTTLYVTLEPCVMCSGAMLHARLDRVVYGAADPKTGAAGSVFDVFSSKQIN 126

Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149
           H   +  G+  +   Q++++FFKERR
Sbjct: 127 HQTSVEGGVMGEECGQLLRNFFKERR 152


>gi|296332941|ref|ZP_06875399.1| tRNA specific adenosine deaminase [Bacillus subtilis subsp.
           spizizenii ATCC 6633]
 gi|305672716|ref|YP_003864387.1| tRNA specific adenosine deaminase [Bacillus subtilis subsp.
           spizizenii str. W23]
 gi|296149905|gb|EFG90796.1| tRNA specific adenosine deaminase [Bacillus subtilis subsp.
           spizizenii ATCC 6633]
 gi|305410959|gb|ADM36077.1| tRNA specific adenosine deaminase [Bacillus subtilis subsp.
           spizizenii str. W23]
          Length = 161

 Score =  229 bits (584), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 55/149 (36%), Positives = 85/149 (57%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M +  ++M  A++EA+ A  + E+P+GAV V+N++II+RA N     +   AHAE+L I 
Sbjct: 1   MTQDELYMKEAIKEAKKAEEKGEVPIGAVLVVNDEIIARAHNLRETEQRSIAHAEMLVID 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
             C+ L    L    LYVTLEPC MCA A+ L+R+ ++ +GA +PKGG            
Sbjct: 61  EACKALGTWRLEGATLYVTLEPCPMCAGAVVLSRVEKVVFGAFDPKGGCSGTIMNLLQEE 120

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  E+  G+ E+    ++  FF+E R
Sbjct: 121 RFNHQAEVVSGVLEEECGGMLSSFFRELR 149


>gi|323488468|ref|ZP_08093714.1| hypothetical protein GPDM_03987 [Planococcus donghaensis MPA1U2]
 gi|323397860|gb|EGA90660.1| hypothetical protein GPDM_03987 [Planococcus donghaensis MPA1U2]
          Length = 162

 Score =  229 bits (584), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 53/149 (35%), Positives = 82/149 (55%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M+K + +M  A+EEA  AA + E+P+GAV V  +++I+RA N      +   HAE+LAI+
Sbjct: 4   MEKDHFYMQLAIEEANKAAAKGEVPIGAVIVYKDEVIARAHNLRETTNNAVTHAELLAIQ 63

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
             C  L    L +  LYVTLEPC MCA AI  +RI  + YGA + K G +++  +     
Sbjct: 64  EACLHLGNWRLEDTKLYVTLEPCPMCAGAILQSRIPHIVYGARDAKAGCVDSLYRLLNDD 123

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  ++   +      Q++  FF+  R
Sbjct: 124 RFNHQCQVTENVLADECGQLLTQFFRNLR 152


>gi|291526516|emb|CBK92103.1| Cytosine/adenosine deaminases [Eubacterium rectale DSM 17629]
 gi|291527005|emb|CBK92591.1| Cytosine/adenosine deaminases [Eubacterium rectale M104/1]
          Length = 157

 Score =  229 bits (584), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 56/149 (37%), Positives = 78/149 (52%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M +   +M  A+++A+ A   +E+P+G V V  +KII+R  NR    K+  AHAE+ AIR
Sbjct: 1   MTQDEKYMKQAIKQAKKAYALDEVPIGCVIVAGDKIIARGYNRRNTDKNPLAHAELSAIR 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              +      L E  +YVTLEPC MCA AI  ARI R+  GA NPK G   +      + 
Sbjct: 61  KASKKTGDWRLEECTMYVTLEPCQMCAGAIVQARIPRVVIGAMNPKAGCAGSIINLLQMQ 120

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  +   GI       ++  FFKE R
Sbjct: 121 QFNHQVQTDIGICGDECSTMLSTFFKELR 149


>gi|298693889|gb|ADI97111.1| cytosine deaminase [Staphylococcus aureus subsp. aureus ED133]
          Length = 156

 Score =  229 bits (584), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 55/149 (36%), Positives = 83/149 (55%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M     FM+ A+EEA+ AA   E+P+GA+   ++++I+RA N    L+  TAHAE +AI 
Sbjct: 1   MTNDIYFMTLAIEEAKKAAQLGEVPIGAIITKDDEVIARAHNLRETLQQPTAHAEHIAIE 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              ++L    L    LYVTLEPC MCA  I ++RI R+ YGA +PKGG   +       +
Sbjct: 61  RAAKVLGSWRLEGCTLYVTLEPCVMCAGTIVMSRIPRVVYGADDPKGGCSGSLMNLLQQS 120

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H   +  G+ ++    ++  FFK  R
Sbjct: 121 NFNHRAIVDKGVLKEACSTLLTTFFKNLR 149


>gi|296136215|ref|YP_003643457.1| CMP/dCMP deaminase zinc-binding protein [Thiomonas intermedia K12]
 gi|295796337|gb|ADG31127.1| CMP/dCMP deaminase zinc-binding protein [Thiomonas intermedia K12]
          Length = 187

 Score =  229 bits (584), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 63/149 (42%), Positives = 87/149 (58%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           ++    FM  AL++AQNA L  E+PVGAV V + K+I+   NR     D TAHAEI+A+R
Sbjct: 9   LEADRAFMRLALDQAQNAWLLGEVPVGAVIVKDGKVIATGYNRPIGDHDPTAHAEIVALR 68

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
               +L    LPE  LYVTLEPC MCA A+  AR  R+ +GA +PK G   +    +   
Sbjct: 69  QAAHLLGNYRLPECTLYVTLEPCAMCAMALLHARFARVVFGARDPKTGAAGSVVDLFAEP 128

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  +I P I ++    ++QDFF+ RR
Sbjct: 129 RLNHHCDITPEIEQEACSALLQDFFRARR 157


>gi|296276694|ref|ZP_06859201.1| putative tRNA-specific adenosine deaminase [Staphylococcus aureus
           subsp. aureus MR1]
          Length = 156

 Score =  229 bits (584), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 55/149 (36%), Positives = 83/149 (55%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M     FM+ A+EEA+ AA   E+P+GA+   ++++I+RA N    L+  TAHAE +AI 
Sbjct: 1   MTNDIYFMTLAIEEAKKAAQLGEVPIGAIITKDDEVIARAHNLRETLQQPTAHAEHIAIE 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              ++L    L    LYVTLEPC MCA  I ++RI R+ YGA +PKGG   +       +
Sbjct: 61  RAAKVLGSWRLEGCTLYVTLEPCVMCAGTIVMSRIPRVVYGADDPKGGCSSSLMNLLQQS 120

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H   +  G+ ++    ++  FFK  R
Sbjct: 121 NFNHRAIVDKGVLKEACSTLLTTFFKNLR 149


>gi|253577340|ref|ZP_04854657.1| CMP/dCMP deaminase, zinc-binding [Paenibacillus sp. oral taxon 786
           str. D14]
 gi|251843240|gb|EES71271.1| CMP/dCMP deaminase, zinc-binding [Paenibacillus sp. oral taxon 786
           str. D14]
          Length = 165

 Score =  228 bits (583), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 52/146 (35%), Positives = 74/146 (50%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
              +M+ A+ EA+ A    E+P+GAV V  ++I+ R  N      D TAHAE++AIR   
Sbjct: 18  HEYWMAEAIREARKAEAIGEVPIGAVIVRGDEIVGRGHNLRESSLDGTAHAEMIAIREAS 77

Query: 64  RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123
             L    L    LYVTLEPC MCA AI   R+  + YGA +PK G              +
Sbjct: 78  ERLGAWRLLHCRLYVTLEPCPMCAGAIVQCRVPHVIYGAPDPKAGCAGTLMNLLQEPRFN 137

Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149
           H  +I  GI ++    ++ +FF+  R
Sbjct: 138 HRTDITSGILQEECASLLTEFFRRLR 163


>gi|194018067|ref|ZP_03056672.1| tRNA-specific adenosine deaminase [Bacillus pumilus ATCC 7061]
 gi|194010259|gb|EDW19836.1| tRNA-specific adenosine deaminase [Bacillus pumilus ATCC 7061]
          Length = 158

 Score =  228 bits (583), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 54/149 (36%), Positives = 82/149 (55%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M +   FM  A+ EA  A    E+P+GA+ V++++I+SRA N     +   AHAE+LAI 
Sbjct: 1   MTRDEQFMQEAISEALKAEQIGEVPIGAIIVVDDQIVSRAHNLRETEQRSIAHAELLAID 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
             C+      L +  LYVTLEPC MCA AI L+R++++ +GA +PKGG            
Sbjct: 61  EACKTTGSWRLEDAVLYVTLEPCPMCAGAIVLSRVKKVVFGAYDPKGGCAGTLMNLLDDE 120

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  E+  G+ E    +++  FF+  R
Sbjct: 121 RFNHQSEVIGGVLENECGELLSQFFRNLR 149


>gi|313616657|gb|EFR89453.1| tRNA-specific adenosine deaminase [Listeria innocua FSL S4-378]
          Length = 156

 Score =  228 bits (583), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 59/149 (39%), Positives = 87/149 (58%), Gaps = 1/149 (0%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M++   FM  ALEEA+ A    E+P+GAV VL+ +II RA N     ++   HAE+LAI 
Sbjct: 1   MEQD-FFMQQALEEAKKAREIGEVPIGAVVVLDGEIIGRAHNLRETTQNAVTHAELLAIE 59

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
             C+  +   L   +LYVTLEPC MC+ AI L+RI ++YYGA +PK G   +        
Sbjct: 60  DACKHQNSWRLSGAELYVTLEPCPMCSGAILLSRIDKVYYGAKDPKAGTAGSLMNLLQDD 119

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H+ ++  G+ E  S  +++ FF+E R
Sbjct: 120 RFNHTCKVEAGLLEAESSAMLKSFFRELR 148


>gi|283469850|emb|CAQ49061.1| tRNA-specific adenosine deaminase [Staphylococcus aureus subsp.
           aureus ST398]
          Length = 156

 Score =  228 bits (583), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 56/149 (37%), Positives = 82/149 (55%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M     FM+ A+EEA+ AA   E+P+GAV    +++I+RA N    L+  TAHAE +AI 
Sbjct: 1   MTNDIYFMTLAIEEAKKAARLGEVPIGAVITKGDEVIARAHNLRETLQQPTAHAEHIAIE 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              ++L    L    LYVTLEPC MCA  I ++RI R+ YGA +PKGG   +       +
Sbjct: 61  RAAKVLGSWRLEGCTLYVTLEPCVMCAGTIVMSRIPRVVYGADDPKGGCSGSLMNLLQQS 120

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H   +  G+ ++    ++  FFK  R
Sbjct: 121 NFNHRAIVDKGVLKEACSTLLTTFFKNLR 149


>gi|160914820|ref|ZP_02077034.1| hypothetical protein EUBDOL_00828 [Eubacterium dolichum DSM 3991]
 gi|158433360|gb|EDP11649.1| hypothetical protein EUBDOL_00828 [Eubacterium dolichum DSM 3991]
          Length = 152

 Score =  228 bits (583), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 60/146 (41%), Positives = 86/146 (58%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
              FM  A++EA+ A L +E+P+G V V ++KII+R  N     +  TAHAEI+AI   C
Sbjct: 2   NEKFMVEAIKEAKKAELIDEVPIGCVIVKDDKIIARGHNLRESKQRSTAHAEIIAIEKAC 61

Query: 64  RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123
           R L    L    LYVTLEPC MC+ AI  +RI  + YGA +PKGG +E+    Y +   +
Sbjct: 62  RKLKSWRLEGCSLYVTLEPCPMCSGAILQSRIEHVVYGAKDPKGGCMESCMNMYEVKGFN 121

Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149
           H P++  G+ E     +++ FFK +R
Sbjct: 122 HYPDVIGGVLEDECGSLLKTFFKRKR 147


>gi|73663465|ref|YP_302246.1| cytosine adenosine deaminase [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
 gi|72495980|dbj|BAE19301.1| putative cytosine adenosine deaminase [Staphylococcus saprophyticus
           subsp. saprophyticus ATCC 15305]
          Length = 163

 Score =  228 bits (583), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 57/149 (38%), Positives = 81/149 (54%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M     +M  A+EEA+ A    E+P+GA+ V N++II+RA N     ++ TAHAE +AI+
Sbjct: 1   MTNHEFYMEVAIEEAKKAGNIGEVPIGAIIVKNDEIIARAHNLRESEQNPTAHAEHIAIQ 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
                L    L    LYVTLEPC MCA +I ++RI  + YGA +PKGG   +        
Sbjct: 61  RAAAALGSWRLEGCTLYVTLEPCVMCAGSIVMSRIPSVIYGAKDPKGGCAGSLMNLLQEP 120

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H   +  GI E+   Q++  FFK  R
Sbjct: 121 RFNHRATVEFGILEESCSQLLTAFFKNIR 149


>gi|238753915|ref|ZP_04615275.1| tRNA-specific adenosine deaminase [Yersinia ruckeri ATCC 29473]
 gi|238707903|gb|EEQ00261.1| tRNA-specific adenosine deaminase [Yersinia ruckeri ATCC 29473]
          Length = 171

 Score =  228 bits (583), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 61/147 (41%), Positives = 80/147 (54%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
               +M  ALE AQ A    E+PVGAV VL+N+ I    NR     D TAHAE++A+R G
Sbjct: 6   NDEYWMRQALELAQRAQEEGEVPVGAVLVLDNQAIGIGWNRPIVHHDPTAHAEMMALRQG 65

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
            + L    L    LYVTLEPC MCA A+  +RIRRL YGA++ K G   +          
Sbjct: 66  GQALQNYRLLNATLYVTLEPCVMCAGAMVHSRIRRLVYGANDIKTGAAGSLLDILRHPGM 125

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H  EI  G+  +   Q +  FF++RR
Sbjct: 126 NHQVEITAGVLAEECSQTLSTFFRQRR 152


>gi|254361249|ref|ZP_04977392.1| cytosine deaminase [Mannheimia haemolytica PHL213]
 gi|153092745|gb|EDN73788.1| cytosine deaminase [Mannheimia haemolytica PHL213]
          Length = 174

 Score =  228 bits (583), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 62/149 (41%), Positives = 86/149 (57%), Gaps = 1/149 (0%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIR 60
           ++   FM  AL+ A  A  + EIPVGAV V  N +II R  N+  +L D +AHAE+ AIR
Sbjct: 16  EQDIAFMQYALDLADLAEAKGEIPVGAVLVDKNQQIIGRGWNQTIQLCDPSAHAEMQAIR 75

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              + L    L +  LYVTLEPC MCA AI  +RI+RL +GAS+ K G + +    +   
Sbjct: 76  QAGQTLGNYRLLDCTLYVTLEPCPMCAGAILHSRIKRLVFGASDYKTGAVGSRYHLFEDY 135

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  E++  +  +   Q I DFFK+RR
Sbjct: 136 KMNHFLEVHGNVLGRECSQKISDFFKQRR 164


>gi|294340450|emb|CAZ88831.1| tRNA-specific adenosine deaminase [Thiomonas sp. 3As]
          Length = 187

 Score =  228 bits (583), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 64/149 (42%), Positives = 87/149 (58%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           ++    FM  AL++AQNA L  E+PVGAV V + K+I+   NR     D TAHAEI+AIR
Sbjct: 9   LEADRAFMRLALDQAQNAWLLGEVPVGAVIVKDGKVIATGYNRPIGDHDPTAHAEIVAIR 68

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
               +L    LPE  LYVTLEPC MCA A+  AR  R+ +GA +PK G   +    +   
Sbjct: 69  QAAHLLGNYRLPECTLYVTLEPCAMCAMALLHARFARVVFGARDPKTGAAGSVVDLFAEP 128

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  +I P I ++    ++QDFF+ RR
Sbjct: 129 RLNHHCDITPEIEQEACSALLQDFFRARR 157


>gi|138893694|ref|YP_001124147.1| cytosine deaminase [Geobacillus thermodenitrificans NG80-2]
 gi|134265207|gb|ABO65402.1| Cytosine deaminase [Geobacillus thermodenitrificans NG80-2]
          Length = 161

 Score =  228 bits (583), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 57/149 (38%), Positives = 80/149 (53%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M     +M  A+EEA+ A    E+P+GAV V + ++I+RA N     +   AHAEILAI 
Sbjct: 2   MNNDEYYMRLAIEEAKKAEQIGEVPIGAVIVQDGRVIARAHNLRETEQRAIAHAEILAIA 61

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
             C+      L    LYVTLEPC MCA AI L+RI R+ +GAS+PKGG           +
Sbjct: 62  EACQATGSWRLERATLYVTLEPCAMCAGAIVLSRIERVVFGASDPKGGCAGTLMNLLQES 121

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  ++  G+       ++ DFF+  R
Sbjct: 122 RFNHQADVTSGVLASECGSLLSDFFRRLR 150


>gi|317049171|ref|YP_004116819.1| CMP/dCMP deaminase zinc-binding protein [Pantoea sp. At-9b]
 gi|316950788|gb|ADU70263.1| CMP/dCMP deaminase zinc-binding protein [Pantoea sp. At-9b]
          Length = 165

 Score =  228 bits (583), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 56/148 (37%), Positives = 79/148 (53%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           +    +M  AL  A+ A  + E+PVGAV V  + +I    NR     D TAHAEI+A+R 
Sbjct: 4   QTDEYWMRHALRLARLAWEQGEVPVGAVLVQGDTVIGEGWNRPIGQHDPTAHAEIMALRQ 63

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
           G ++L    L +  LYVTLEPC MCA A+  +RI RL YGA + K G   +         
Sbjct: 64  GGKVLENYRLLDTTLYVTLEPCVMCAGAMVHSRITRLVYGAKDEKTGAAGSLLDVIGHPG 123

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H  +I  G+  +    ++ DFF+ RR
Sbjct: 124 MNHQIQIDSGVLAEECAAMLSDFFRMRR 151


>gi|261492526|ref|ZP_05989079.1| cytosine deaminase [Mannheimia haemolytica serotype A2 str. BOVINE]
 gi|261496801|ref|ZP_05993175.1| cytosine deaminase [Mannheimia haemolytica serotype A2 str. OVINE]
 gi|261307548|gb|EEY08877.1| cytosine deaminase [Mannheimia haemolytica serotype A2 str. OVINE]
 gi|261311685|gb|EEY12835.1| cytosine deaminase [Mannheimia haemolytica serotype A2 str. BOVINE]
          Length = 174

 Score =  228 bits (582), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 62/149 (41%), Positives = 85/149 (57%), Gaps = 1/149 (0%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIR 60
           ++   FM  AL+ A  A  + EIPVGAV V  N +II R  N+  +L D +AHAE+ AIR
Sbjct: 16  EQDIAFMQYALDLADLAEAKGEIPVGAVLVDKNQQIIGRGWNQTIQLCDPSAHAEMQAIR 75

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              + L    L +  LYVTLEPC MCA AI  +RI+RL +GAS+ K G + +    +   
Sbjct: 76  QAGQTLGNYRLLDCTLYVTLEPCPMCAGAILHSRIKRLVFGASDYKTGAVGSRYHLFEDY 135

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  E+   +  +   Q I DFFK+RR
Sbjct: 136 KMNHFLEVQGNVLGRECSQKISDFFKQRR 164


>gi|242240191|ref|YP_002988372.1| CMP/dCMP deaminase zinc-binding [Dickeya dadantii Ech703]
 gi|242132248|gb|ACS86550.1| CMP/dCMP deaminase zinc-binding [Dickeya dadantii Ech703]
          Length = 164

 Score =  228 bits (582), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 57/147 (38%), Positives = 77/147 (52%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
               +M  AL  AQ A    E+PVGAV V   K+I    NR     D TAHAE++A+R G
Sbjct: 6   DDEYWMRHALILAQRAWDEGEVPVGAVLVQGGKVIGEGWNRPIGQHDPTAHAEMMALRQG 65

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
            R+L    L +  LY+TLEPC MCA A+  +RI RL YGA++ K G   +          
Sbjct: 66  GRVLQNYRLLDTTLYITLEPCIMCAGAMVHSRISRLVYGAADAKTGAAGSLVDILRHPGM 125

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H   I  G+  +    ++ DFF+ RR
Sbjct: 126 NHQVAITSGVLAEACSTLLSDFFRMRR 152


>gi|268318039|ref|YP_003291758.1| CMP/dCMP deaminase zinc-binding protein [Rhodothermus marinus DSM
           4252]
 gi|262335573|gb|ACY49370.1| CMP/dCMP deaminase zinc-binding protein [Rhodothermus marinus DSM
           4252]
          Length = 158

 Score =  228 bits (582), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 60/149 (40%), Positives = 84/149 (56%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           ++    +M  AL EA+ A    E+PVGAV V +++I+ R  N   +LKD TAHAE+LAI 
Sbjct: 7   LEGHRRWMEAALREAEQAFEEGEVPVGAVVVKDDRIVGRGHNCVEQLKDPTAHAEMLAIT 66

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
             C  L  + L    LYVTLEPC MCA AI  AR+ R+ +GA + K G            
Sbjct: 67  AACATLDTKYLRGCTLYVTLEPCPMCAGAIVWARLDRVVFGAFDEKAGAASTLYNILQDP 126

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  E+  G+  +R+  ++Q FF+ERR
Sbjct: 127 RLNHRVEVISGVEAERAAALLQRFFRERR 155


>gi|206978348|ref|ZP_03239222.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein
           [Bacillus cereus H3081.97]
 gi|217957598|ref|YP_002336140.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein
           [Bacillus cereus AH187]
 gi|222093791|ref|YP_002527839.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein
           [Bacillus cereus Q1]
 gi|228983277|ref|ZP_04143492.1| Uncharacterized deaminase yaaJ [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
 gi|229136865|ref|ZP_04265494.1| Uncharacterized deaminase yaaJ [Bacillus cereus BDRD-ST26]
 gi|229153801|ref|ZP_04281933.1| Uncharacterized deaminase yaaJ [Bacillus cereus ATCC 4342]
 gi|206743440|gb|EDZ54873.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein
           [Bacillus cereus H3081.97]
 gi|217065488|gb|ACJ79738.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein
           [Bacillus cereus AH187]
 gi|221237837|gb|ACM10547.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein
           [Bacillus cereus Q1]
 gi|228629670|gb|EEK86365.1| Uncharacterized deaminase yaaJ [Bacillus cereus ATCC 4342]
 gi|228646600|gb|EEL02805.1| Uncharacterized deaminase yaaJ [Bacillus cereus BDRD-ST26]
 gi|228776457|gb|EEM24808.1| Uncharacterized deaminase yaaJ [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
          Length = 166

 Score =  228 bits (582), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 62/151 (41%), Positives = 87/151 (57%), Gaps = 2/151 (1%)

Query: 1   MKKGN--VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           M++     FM  A+EEA+ A    E+P+GAV VLN ++IS A N     +   AHAE+LA
Sbjct: 1   MERDQDIYFMQLAIEEAKKAEAIQEVPIGAVIVLNGEVISVAHNLRETEQRSIAHAELLA 60

Query: 59  IRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
           I   C+ L    L +  LYVTLEPC MCA  I L+R++R+ YGAS+PKGG         T
Sbjct: 61  IDEACKKLGTWRLEDATLYVTLEPCPMCAGGIVLSRVKRVVYGASDPKGGCAGTLMNLLT 120

Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
               +H  E+  G+ E+    ++ +FF+E R
Sbjct: 121 DERFNHQCEVVAGVLEEECGTLLTNFFRELR 151


>gi|326802964|ref|YP_004320782.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Aerococcus urinae ACS-120-V-Col10a]
 gi|326651114|gb|AEA01297.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Aerococcus urinae ACS-120-V-Col10a]
          Length = 162

 Score =  228 bits (582), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 60/148 (40%), Positives = 90/148 (60%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
            K + FM  A+++A+ A   +E+P+GAVAV   ++I R  N   + +D T HAE+ AIR 
Sbjct: 3   DKADYFMQAAIDQAKKAQDLDEVPIGAVAVYRGQVIGRGYNLREQSQDATDHAEMQAIRQ 62

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
             R L+   L +VDLYVTLEPC+MC+ AI L+RIR LY+GAS+PK G   +         
Sbjct: 63  ANRYLNNWRLNDVDLYVTLEPCSMCSGAIVLSRIRCLYFGASDPKAGTCGSLMNLVQDPR 122

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H  ++  G+  +   Q+++ FFK+ R
Sbjct: 123 LNHQVDLVSGLRGEECSQLLKSFFKDLR 150


>gi|307132102|ref|YP_003884118.1| tRNA-specific adenosine-34 deaminase [Dickeya dadantii 3937]
 gi|306529631|gb|ADM99561.1| tRNA-specific adenosine-34 deaminase [Dickeya dadantii 3937]
          Length = 167

 Score =  228 bits (582), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 56/147 (38%), Positives = 76/147 (51%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
               +M  AL  AQ A    E+PVGAV V  +KII    NR     D TAHAEI+A++ G
Sbjct: 6   DDEFWMRHALTLAQRAWDAGEVPVGAVLVRGDKIIGEGWNRPISRNDPTAHAEIMALQQG 65

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
            + L    L +  LY+TLEPC MCA A+  +RI RL YGA++ K G   +          
Sbjct: 66  GQALQNYRLLDTTLYITLEPCVMCAGAMIHSRINRLVYGAADAKTGAAGSLVDILRHPGM 125

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H   I  G+      +++  FF+ RR
Sbjct: 126 NHHIVITDGVLADECSELLSRFFRMRR 152


>gi|16801927|ref|NP_472195.1| hypothetical protein lin2867 [Listeria innocua Clip11262]
 gi|16415402|emb|CAC98093.1| lin2867 [Listeria innocua Clip11262]
          Length = 154

 Score =  227 bits (581), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 59/149 (39%), Positives = 87/149 (58%), Gaps = 1/149 (0%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M++   FM  ALEEA+ A    E+P+GAV VL+ +II RA N     ++   HAE+LAI 
Sbjct: 1   MEQD-FFMQQALEEAKKAREIGEVPIGAVVVLDGEIIGRAHNLRETTQNAVTHAELLAIE 59

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
             C+  +   L   +LYVTLEPC MC+ AI L+RI ++YYGA +PK G   +        
Sbjct: 60  DACKHQNSWRLSGAELYVTLEPCPMCSGAILLSRIDKVYYGAKDPKAGTAGSLMNLLQDD 119

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H+ ++  G+ E  S  +++ FF+E R
Sbjct: 120 RFNHTCKVEAGLLEAESSAMLKSFFRELR 148


>gi|319648541|ref|ZP_08002756.1| YaaJ protein [Bacillus sp. BT1B_CT2]
 gi|317389389|gb|EFV70201.1| YaaJ protein [Bacillus sp. BT1B_CT2]
          Length = 160

 Score =  227 bits (581), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 58/149 (38%), Positives = 84/149 (56%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M +   +M  A+ EA+ A  + E+P+GAV VL+ +II+RA N     +   AHAE+L I 
Sbjct: 1   MTQDEFYMKEAVNEARKAEEKGEVPIGAVLVLDGEIIARAHNLRETEQRSVAHAEMLVIE 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
             CR L    L    LYVTLEPC MCA A  L+RI ++ +GAS+PKGG            
Sbjct: 61  EACRKLGTWRLERAVLYVTLEPCPMCAGAAVLSRIDKVVFGASDPKGGCAGTLMNLLQEE 120

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  E+  G+ E+   +++ DFF++ R
Sbjct: 121 RFNHQAEVVSGVMEEECGRMLSDFFRKLR 149


>gi|197302614|ref|ZP_03167668.1| hypothetical protein RUMLAC_01343 [Ruminococcus lactaris ATCC
           29176]
 gi|197298196|gb|EDY32742.1| hypothetical protein RUMLAC_01343 [Ruminococcus lactaris ATCC
           29176]
          Length = 180

 Score =  227 bits (581), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 55/147 (37%), Positives = 76/147 (51%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
           +   +M  AL++A+ A    E P+G V V   KII+R  NR    K   AHAEI AI+  
Sbjct: 21  RDEKYMKEALKQAKKAYALEETPIGCVIVHEGKIIARGYNRRNTDKSPLAHAEISAIKKA 80

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
            + L    L E  LYVTLEPC MCA AI  +RI R+  G  NPK G   +      +   
Sbjct: 81  SKKLGDWRLEECTLYVTLEPCQMCAGAIIQSRIPRVVVGCMNPKAGCAGSVLNLLDVQAF 140

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H  E+   + E+    +++ FF+E R
Sbjct: 141 NHQAEVKTKVLEEECSLMMKQFFRELR 167


>gi|154505232|ref|ZP_02041970.1| hypothetical protein RUMGNA_02745 [Ruminococcus gnavus ATCC 29149]
 gi|153794430|gb|EDN76850.1| hypothetical protein RUMGNA_02745 [Ruminococcus gnavus ATCC 29149]
          Length = 179

 Score =  227 bits (581), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 54/149 (36%), Positives = 81/149 (54%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M +   +M  A+ +A+ A    E+P+G V V  +KII R  NR    K+  AHAE+ AIR
Sbjct: 20  MNQDEKYMREAIRQAKKAYALEEVPIGCVIVYQDKIIGRGYNRRTVDKNTLAHAELQAIR 79

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              + +    L +  +YVTLEPC MC+ AI  ARI+R+  G  NPK G   +      + 
Sbjct: 80  KASKKMDDWRLEDCTMYVTLEPCQMCSGAIVQARIKRVVVGCMNPKAGCAGSILNLLDMK 139

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  E+  G+ E++   +++ FFKE R
Sbjct: 140 EFNHQVELTTGVLEEQCSGMMKQFFKELR 168


>gi|293400048|ref|ZP_06644194.1| cytidine/deoxycytidylate deaminase family protein
           [Erysipelotrichaceae bacterium 5_2_54FAA]
 gi|291306448|gb|EFE47691.1| cytidine/deoxycytidylate deaminase family protein
           [Erysipelotrichaceae bacterium 5_2_54FAA]
          Length = 157

 Score =  227 bits (581), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 59/146 (40%), Positives = 87/146 (59%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
              FM  A++EA+ A   +E+P+G V V  NKII+RA N     +   AHAEILAI   C
Sbjct: 2   HENFMLEAIKEAEKAFAIDEVPIGCVIVYQNKIIARAHNLRESKQSAIAHAEILAIEKAC 61

Query: 64  RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123
            I+    L +  LYVTLEPC MC+ AI  +R++ + +GA +PKGG I++  + Y     +
Sbjct: 62  NIIGSWRLEDCTLYVTLEPCPMCSGAIIQSRMKTVVFGAYDPKGGCIKSCMKMYETPGFN 121

Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149
           H PE   GI E+    +++ FF+++R
Sbjct: 122 HYPETIGGILEEECGALLKQFFRQKR 147


>gi|264677875|ref|YP_003277782.1| CMP/dCMP deaminase, zinc-binding protein [Comamonas testosteroni
           CNB-2]
 gi|262208388|gb|ACY32486.1| CMP/dCMP deaminase, zinc-binding protein [Comamonas testosteroni
           CNB-2]
          Length = 457

 Score =  227 bits (581), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 55/146 (37%), Positives = 81/146 (55%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
              FM  ALE+A+ AA   E+PVGAV V + ++I R  N     +D TAHAE+LA+R   
Sbjct: 8   HEHFMRQALEQARRAAACGEVPVGAVVVKDGQVIGRGHNSPLSAQDPTAHAEVLALREAA 67

Query: 64  RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123
           R L    L    LYVTLEPCTMC+ A+  AR+  + YGA+ P+ G   +    +     +
Sbjct: 68  RTLGNYRLEGCTLYVTLEPCTMCSGAMLHARVDAVVYGAAEPRTGAAGSVLDVFGYPAIN 127

Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149
           H   +  G+   +   ++ +FF++RR
Sbjct: 128 HQTRVLRGVLAAQCSALMAEFFQQRR 153


>gi|52145192|ref|YP_081636.1| cytidine/deoxycytidylate deaminase family protein [Bacillus cereus
           E33L]
 gi|51978661|gb|AAU20211.1| probable cytidine/deoxycytidylate deaminase family protein
           [Bacillus cereus E33L]
          Length = 166

 Score =  227 bits (581), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 61/151 (40%), Positives = 86/151 (56%), Gaps = 2/151 (1%)

Query: 1   MKKGN--VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           M++     FM  A+EEA+ A    E+P+GAV VLN ++IS A N     +   AHAE+LA
Sbjct: 1   MERDQDIYFMQLAIEEAKKAEAIQEVPIGAVIVLNGEVISAAHNLRETEQRSIAHAELLA 60

Query: 59  IRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
           I   C+ L    L +  LYVTLEPC MCA  I L+R++R+ YGA +PKGG         T
Sbjct: 61  IDEACKKLGTWRLEDATLYVTLEPCPMCAGGIVLSRVKRVVYGAGDPKGGCAGTLMNLLT 120

Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
               +H  E+  G+ E+    ++ +FF+E R
Sbjct: 121 DERFNHQCEVVDGVLEEECGTLLTNFFRELR 151


>gi|317499420|ref|ZP_07957687.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Lachnospiraceae bacterium 5_1_63FAA]
 gi|316893292|gb|EFV15507.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Lachnospiraceae bacterium 5_1_63FAA]
          Length = 161

 Score =  227 bits (581), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 58/149 (38%), Positives = 89/149 (59%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M +   +M  A+++A+ AA+  ++P+G V V ++KII+RA N+  + K   AHAE+LAI+
Sbjct: 1   MTQEEKYMKEAIKQAKKAAVIGDVPIGCVIVEDDKIIARAYNQRNKKKTTLAHAELLAIQ 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              + ++   L +  +Y+TLEPC MCA AI  ARI ++  GA NPK G   +      + 
Sbjct: 61  KASKKVNDWRLEDCTMYITLEPCQMCAGAIVQARIPKVVIGAMNPKAGCAGSVLNILQID 120

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  EI  GI E+   Q++ DFFKE R
Sbjct: 121 KFNHQVEIERGILEEECSQMLSDFFKELR 149


>gi|169825638|ref|YP_001695796.1| hypothetical protein Bsph_0024 [Lysinibacillus sphaericus C3-41]
 gi|168990126|gb|ACA37666.1| Hypothetical yaaJ protein [Lysinibacillus sphaericus C3-41]
          Length = 170

 Score =  227 bits (581), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 58/148 (39%), Positives = 87/148 (58%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           +   +FM  ALEEA+ AA+  E+P+GAV V + +II+RA N     ++ T HAE++ I+ 
Sbjct: 5   ETDRLFMKQALEEAKKAAILGEVPIGAVLVYDGEIIARAHNLRETTQNATTHAELMVIQE 64

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
            C+ +    L +  LYVTLEPC MCA AI  +R+ R+ YGA + K G +++  +    A 
Sbjct: 65  ACQKIGSWRLEKTTLYVTLEPCPMCAGAILQSRVPRVVYGARDIKAGCVDSLYRILNDAR 124

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H  E+  GI      QI+ DFF+  R
Sbjct: 125 FNHECEVSEGILADECGQILTDFFRALR 152


>gi|325662866|ref|ZP_08151435.1| hypothetical protein HMPREF0490_02175 [Lachnospiraceae bacterium
           4_1_37FAA]
 gi|325470918|gb|EGC74147.1| hypothetical protein HMPREF0490_02175 [Lachnospiraceae bacterium
           4_1_37FAA]
          Length = 163

 Score =  227 bits (581), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 52/149 (34%), Positives = 83/149 (55%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M +   +M  A+ +A+ A    E+P+G V V  +KII+R  NR    K+  AHAE++AIR
Sbjct: 1   MNQDEKYMKEAIRQAKKAYALKEVPIGCVIVYQDKIIARGYNRRTIDKNTLAHAELIAIR 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              R +    L +  +YVTLEPC MC+ AI  +R++++  G  NPK G   +      + 
Sbjct: 61  KASRKMDDWRLEDCTMYVTLEPCQMCSGAIVQSRMKKVVVGCMNPKAGCAGSIFNLLQVP 120

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  E+  G+ E+   Q+++ FF+E R
Sbjct: 121 QFNHQVELEIGVLEEECSQLMKSFFRELR 149


>gi|167766023|ref|ZP_02438076.1| hypothetical protein CLOSS21_00515 [Clostridium sp. SS2/1]
 gi|167712103|gb|EDS22682.1| hypothetical protein CLOSS21_00515 [Clostridium sp. SS2/1]
          Length = 161

 Score =  227 bits (581), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 58/149 (38%), Positives = 89/149 (59%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M +   +M  A+++A+ AA+  ++P+G V V ++KII+RA N+  + K   AHAE+LAI+
Sbjct: 1   MTQEEKYMKEAIKQAKKAAVIGDVPIGCVIVEDDKIIARAYNQRNKKKTTLAHAELLAIQ 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              + ++   L +  +Y+TLEPC MCA AI  ARI ++  GA NPK G   +      + 
Sbjct: 61  KASKKVNDWRLEDCTMYITLEPCQMCAGAIVQARIPKVVIGAMNPKAGCAGSVLNILQID 120

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  EI  GI E+   Q++ DFFKE R
Sbjct: 121 KFNHQVEIERGILEEECSQMLSDFFKELR 149


>gi|150387879|ref|YP_001317928.1| CMP/dCMP deaminase, zinc-binding [Alkaliphilus metalliredigens
           QYMF]
 gi|149947741|gb|ABR46269.1| CMP/dCMP deaminase, zinc-binding [Alkaliphilus metalliredigens
           QYMF]
          Length = 151

 Score =  227 bits (581), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 61/144 (42%), Positives = 81/144 (56%)

Query: 6   VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
            +MS ALEEA+ A    E+P+GA+ +  NK+I+ A N      D TAHAEI+AI+  CR 
Sbjct: 4   YYMSLALEEAKKAYELGEVPIGAIILRENKVIAAAHNLRESHHDATAHAEIIAIQAACRR 63

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           L    L    L+VT+EPC MCA AI  +RI R+  GA +PK G   +          +H 
Sbjct: 64  LGGWRLTNSTLFVTIEPCPMCAGAILQSRIDRVVIGAMDPKAGACGSIINLLNNNQFNHQ 123

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
            EI  G+ E    QI++DFFK  R
Sbjct: 124 TEIVTGVLEDECSQIMKDFFKSLR 147


>gi|260584497|ref|ZP_05852244.1| cytidine/deoxycytidylate deaminase [Granulicatella elegans ATCC
           700633]
 gi|260158015|gb|EEW93084.1| cytidine/deoxycytidylate deaminase [Granulicatella elegans ATCC
           700633]
          Length = 170

 Score =  227 bits (581), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 60/148 (40%), Positives = 90/148 (60%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           K+  +FM  AL+EAQ A  + E+P+GAV VLN +II R  N   + +D T HAEI AIR 
Sbjct: 7   KEKEMFMREALKEAQKAYDKEEVPIGAVVVLNGEIIGRGHNLREKEQDATLHAEIKAIRQ 66

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
             ++L    L + +L+VTLEPC MC+ A+ L+R++++ +GA +PK G             
Sbjct: 67  ANQVLGSWRLEDCELFVTLEPCPMCSGAMILSRLKKVTFGAFDPKAGTAGTFMNLLQDER 126

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H  E+  G+ E+  +QI++DFFK  R
Sbjct: 127 FNHQVEVEHGVLEEECQQILKDFFKGLR 154


>gi|329902676|ref|ZP_08273230.1| tRNA-specific adenosine-34 deaminase [Oxalobacteraceae bacterium
           IMCC9480]
 gi|327548648|gb|EGF33298.1| tRNA-specific adenosine-34 deaminase [Oxalobacteraceae bacterium
           IMCC9480]
          Length = 161

 Score =  227 bits (581), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 60/147 (40%), Positives = 87/147 (59%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
             +VFM  A+++A NA    E+PVGAV V + ++I+   N++    D TAHAEI+A+R G
Sbjct: 2   DDSVFMRLAMDQAHNAWALGEVPVGAVLVKDGQVIATGFNQSIGTHDPTAHAEIMALRAG 61

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
             +L    LP  +LYVTLEPC MCA A+  AR+ R+ YGAS+PK G   +    +  A  
Sbjct: 62  ASLLGNYRLPGCELYVTLEPCAMCAGAMMHARLARVVYGASDPKTGCCGSVLDLFGQAQL 121

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H   +  G+       +++DFF ERR
Sbjct: 122 NHHTGLVGGVLADACSALLKDFFAERR 148


>gi|324324011|gb|ADY19271.1| cytidine/deoxycytidylate deaminase zinc-binding domain-containing
           protein [Bacillus thuringiensis serovar finitimus
           YBT-020]
          Length = 166

 Score =  227 bits (580), Expect = 4e-58,   Method: Composition-based stats.
 Identities = 60/151 (39%), Positives = 86/151 (56%), Gaps = 2/151 (1%)

Query: 1   MKKGN--VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           M++     FM  A+EEA+ A    E+P+GAV VL+ ++IS A N     +   AHAE+LA
Sbjct: 1   MERDQDIYFMQLAIEEAKKAEAIQEVPIGAVIVLDGEVISVAHNLRETEQRSIAHAELLA 60

Query: 59  IRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
           I   C+ L    L +  LYVTLEPC MCA  I L+R++R+ YGAS+PKGG         T
Sbjct: 61  IDEACKKLGTWRLEDATLYVTLEPCPMCAGGIVLSRVKRVVYGASDPKGGCAGTLMNLLT 120

Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
               +H  E+  G+ E+    ++ +FF+  R
Sbjct: 121 DERFNHQCEVVAGVLEEECGTLLTNFFRALR 151


>gi|322383121|ref|ZP_08056948.1| tRNA specific adenosine deaminase-like protein [Paenibacillus
           larvae subsp. larvae B-3650]
 gi|321152783|gb|EFX45409.1| tRNA specific adenosine deaminase-like protein [Paenibacillus
           larvae subsp. larvae B-3650]
          Length = 157

 Score =  227 bits (580), Expect = 4e-58,   Method: Composition-based stats.
 Identities = 54/148 (36%), Positives = 74/148 (50%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           ++   +M  A+ EA  A   +E+P+GAV V   +II R  N      D TAHAE++AIR 
Sbjct: 7   EEHEQWMQEAISEALKAETIHEVPIGAVIVHEGRIIGRGHNLRETSMDPTAHAEMIAIRE 66

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
               L    L    LYVTLEPC MCA AI  +RI R+ YG  +PK G             
Sbjct: 67  ASEYLRAWRLLNCTLYVTLEPCPMCAGAIVQSRILRVVYGTIDPKAGCAGTLMNLLQEDR 126

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H  E+  GI  +    ++  FF++ R
Sbjct: 127 FNHRVEVINGILREECSSLLTSFFRKLR 154


>gi|52783876|ref|YP_089705.1| YaaJ [Bacillus licheniformis ATCC 14580]
 gi|52346378|gb|AAU39012.1| YaaJ [Bacillus licheniformis ATCC 14580]
          Length = 162

 Score =  227 bits (580), Expect = 4e-58,   Method: Composition-based stats.
 Identities = 58/149 (38%), Positives = 84/149 (56%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M +   +M  A+ EA+ A  + E+P+GAV VL+ +II+RA N     +   AHAE+L I 
Sbjct: 3   MTQDEFYMKEAVNEARKAEEKGEVPIGAVLVLDGEIIARAHNLRETEQRSVAHAEMLVIE 62

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
             CR L    L    LYVTLEPC MCA A  L+RI ++ +GAS+PKGG            
Sbjct: 63  EACRKLGTWRLERAVLYVTLEPCPMCAGAAVLSRIDKVVFGASDPKGGCAGTLMNLLQEE 122

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  E+  G+ E+   +++ DFF++ R
Sbjct: 123 RFNHQAEVVSGVMEEECGRMLSDFFRKLR 151


>gi|153853556|ref|ZP_01994936.1| hypothetical protein DORLON_00926 [Dorea longicatena DSM 13814]
 gi|149753711|gb|EDM63642.1| hypothetical protein DORLON_00926 [Dorea longicatena DSM 13814]
          Length = 169

 Score =  227 bits (580), Expect = 4e-58,   Method: Composition-based stats.
 Identities = 50/148 (33%), Positives = 80/148 (54%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
                +M  A+++A+ A    E+P+G V V  +KII R  NR     +  AHAE++AI+ 
Sbjct: 5   STDEKYMKEAIKQAKKAYAIGEVPIGCVIVYQDKIIGRGYNRRTIDNNTLAHAELIAIKK 64

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
             + ++   L +  +YVTLEPC MC+ AI  +R+ R+  G  NPK G   +      +  
Sbjct: 65  ASKKMNDWRLEDCTMYVTLEPCQMCSGAIVQSRMTRVVVGCMNPKAGCAGSILNLLDIPE 124

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H  E+  G+ E+   Q+++ FFKE R
Sbjct: 125 FNHQVELTTGVMEEECSQMMKSFFKELR 152


>gi|229170871|ref|ZP_04298476.1| hypothetical protein bcere0006_110 [Bacillus cereus MM3]
 gi|228612606|gb|EEK69823.1| hypothetical protein bcere0006_110 [Bacillus cereus MM3]
          Length = 166

 Score =  227 bits (580), Expect = 4e-58,   Method: Composition-based stats.
 Identities = 59/148 (39%), Positives = 85/148 (57%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
            +   FM  A+EEA+ A    E+P+GAV VL+ ++IS A N     +   AHAE+LA+  
Sbjct: 4   DQDIYFMQLAIEEAKKAEAIQEVPIGAVIVLDGEVISVAHNLRETEQRSIAHAELLALDE 63

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
            C+ L    L +  LYVTLEPC MCA  I L+R++R+ YGAS+PKGG         T   
Sbjct: 64  ACKKLGTWRLEDATLYVTLEPCPMCAGGIVLSRVKRVVYGASDPKGGCAGTLMNLLTDER 123

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H  E+  G+ E+    ++ +FF+E R
Sbjct: 124 FNHQCEVVAGVLEEECGTLLTNFFRELR 151


>gi|317493152|ref|ZP_07951575.1| cytidine and deoxycytidylate deaminase zinc-binding protein
           [Enterobacteriaceae bacterium 9_2_54FAA]
 gi|316918812|gb|EFV40148.1| cytidine and deoxycytidylate deaminase zinc-binding protein
           [Enterobacteriaceae bacterium 9_2_54FAA]
          Length = 170

 Score =  227 bits (580), Expect = 4e-58,   Method: Composition-based stats.
 Identities = 57/147 (38%), Positives = 83/147 (56%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
               +M  AL  AQ A  + E+PVGA+ VL++++I +  NR     D TAHAEI+A++ G
Sbjct: 5   NDAYWMKQALALAQKAWEQGEVPVGAILVLDDEVIGQGWNRPITRHDPTAHAEIMALQQG 64

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
            +I+    L    LYVTLEPC MCA A+  +RI+RL YGAS+ K G   +          
Sbjct: 65  GQIVQNYRLLNATLYVTLEPCVMCAGAMVHSRIKRLVYGASDLKTGAAGSLLDVLRHPGM 124

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H  EI  G+      +++  FF++RR
Sbjct: 125 NHQIEITAGVMANECSEMLSQFFQQRR 151


>gi|157691308|ref|YP_001485770.1| nucleoside deaminase [Bacillus pumilus SAFR-032]
 gi|157680066|gb|ABV61210.1| possible nucleoside deaminase [Bacillus pumilus SAFR-032]
          Length = 158

 Score =  227 bits (580), Expect = 4e-58,   Method: Composition-based stats.
 Identities = 54/149 (36%), Positives = 82/149 (55%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M +   FM  A+ EA  A    E+P+GA+ V++++I+SRA N     +   AHAE+LAI 
Sbjct: 1   MTRDEQFMQEAISEALKAEQIGEVPIGAIIVVDDQIVSRAHNLRETEQRSIAHAELLAID 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
             C+      L +  LYVTLEPC MCA AI L+R++++ +GA +PKGG            
Sbjct: 61  EACKTTESWRLEDAVLYVTLEPCPMCAGAIVLSRVKKVVFGAYDPKGGCAGTLMNLLDDE 120

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  E+  G+ E    +++  FF+  R
Sbjct: 121 RFNHQSEVIGGVLENECGELLSQFFRNLR 149


>gi|229917437|ref|YP_002886083.1| CMP/dCMP deaminase zinc-binding [Exiguobacterium sp. AT1b]
 gi|229468866|gb|ACQ70638.1| CMP/dCMP deaminase zinc-binding [Exiguobacterium sp. AT1b]
          Length = 166

 Score =  227 bits (580), Expect = 5e-58,   Method: Composition-based stats.
 Identities = 53/149 (35%), Positives = 81/149 (54%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M++   FM  A+EEA+ A    E+P+G V V  +++I+   NR    +   AHAE++AI 
Sbjct: 1   MERDERFMQLAIEEAKKAEAIGEVPIGCVIVKGDQVIATGHNRRETDRLAAAHAEMIAIE 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
                L    L + +LYVTLEPC MCA AI L+R++R+ +GA +PKGG            
Sbjct: 61  TANETLGNWRLEDCELYVTLEPCPMCAGAIVLSRVKRVIFGAHDPKGGCCGTLMNLVQDE 120

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  E+   +  +   Q++ DFF+  R
Sbjct: 121 RFNHQAEVTENVLAEECGQLLTDFFRALR 149


>gi|266621805|ref|ZP_06114740.1| tRNA-specific adenosine deaminase [Clostridium hathewayi DSM 13479]
 gi|288866494|gb|EFC98792.1| tRNA-specific adenosine deaminase [Clostridium hathewayi DSM 13479]
          Length = 165

 Score =  227 bits (579), Expect = 5e-58,   Method: Composition-based stats.
 Identities = 54/149 (36%), Positives = 81/149 (54%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M     +M  A+ +A+ A    E+P+G V V  +KII+R  NR    K+V +HAEI+AI+
Sbjct: 1   MNADEKYMRAAIGQARKAGAIGEVPIGCVIVYEDKIIARGYNRRTIDKNVLSHAEIIAIK 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
             C+ +    L    +YVTLEPC MCA AI  ARI ++  G  NPK G   +        
Sbjct: 61  KACKKIGDWRLEGCTMYVTLEPCPMCAGAIVQARIPKVVIGCMNPKAGCAGSVLDLLHED 120

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  E+  G+ E+   +++++FFK  R
Sbjct: 121 GFNHQVEMEKGVLEEECSRLMKEFFKALR 149


>gi|30260212|ref|NP_842589.1| cytidine/deoxycytidylate deaminase zinc-binding domain-containing
           protein [Bacillus anthracis str. Ames]
 gi|47525273|ref|YP_016622.1| cytidine/deoxycytidylate deaminase zinc-binding domain-containing
           protein [Bacillus anthracis str. 'Ames Ancestor']
 gi|49183056|ref|YP_026308.1| cytidine/deoxycytidylate deaminase zinc-binding domain-containing
           protein [Bacillus anthracis str. Sterne]
 gi|49481561|ref|YP_034377.1| cytidine/deoxycytidylate deaminase family protein [Bacillus
           thuringiensis serovar konkukian str. 97-27]
 gi|65317484|ref|ZP_00390443.1| COG0590: Cytosine/adenosine deaminases [Bacillus anthracis str.
           A2012]
 gi|118475795|ref|YP_892946.1| tRNA-adenosine deaminase [Bacillus thuringiensis str. Al Hakam]
 gi|165873229|ref|ZP_02217840.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein
           [Bacillus anthracis str. A0488]
 gi|167635069|ref|ZP_02393386.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein
           [Bacillus anthracis str. A0442]
 gi|167642053|ref|ZP_02400280.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein
           [Bacillus anthracis str. A0193]
 gi|170688894|ref|ZP_02880096.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein
           [Bacillus anthracis str. A0465]
 gi|170707544|ref|ZP_02897997.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein
           [Bacillus anthracis str. A0389]
 gi|177655687|ref|ZP_02937012.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein
           [Bacillus anthracis str. A0174]
 gi|190569336|ref|ZP_03022228.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein
           [Bacillus anthracis Tsiankovskii-I]
 gi|196036359|ref|ZP_03103756.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein
           [Bacillus cereus W]
 gi|196041943|ref|ZP_03109230.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein
           [Bacillus cereus NVH0597-99]
 gi|196047685|ref|ZP_03114889.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein
           [Bacillus cereus 03BB108]
 gi|218901223|ref|YP_002449057.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein
           [Bacillus cereus AH820]
 gi|225862074|ref|YP_002747452.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein
           [Bacillus cereus 03BB102]
 gi|227812695|ref|YP_002812704.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein
           [Bacillus anthracis str. CDC 684]
 gi|228912760|ref|ZP_04076409.1| Uncharacterized deaminase yaaJ [Bacillus thuringiensis serovar
           pulsiensis BGSC 4CC1]
 gi|228925275|ref|ZP_04088373.1| Uncharacterized deaminase yaaJ [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|228931524|ref|ZP_04094432.1| Uncharacterized deaminase yaaJ [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228943828|ref|ZP_04106215.1| Uncharacterized deaminase yaaJ [Bacillus thuringiensis serovar
           monterrey BGSC 4AJ1]
 gi|229089154|ref|ZP_04220437.1| Uncharacterized deaminase yaaJ [Bacillus cereus Rock3-42]
 gi|229119684|ref|ZP_04248947.1| Uncharacterized deaminase yaaJ [Bacillus cereus 95/8201]
 gi|229182416|ref|ZP_04309669.1| Uncharacterized deaminase yaaJ [Bacillus cereus BGSC 6E1]
 gi|229604522|ref|YP_002864673.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein
           [Bacillus anthracis str. A0248]
 gi|254686610|ref|ZP_05150469.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein
           [Bacillus anthracis str. CNEVA-9066]
 gi|254724163|ref|ZP_05185948.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein
           [Bacillus anthracis str. A1055]
 gi|254737002|ref|ZP_05194707.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein
           [Bacillus anthracis str. Western North America USA6153]
 gi|254744200|ref|ZP_05201881.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein
           [Bacillus anthracis str. Kruger B]
 gi|254751191|ref|ZP_05203230.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein
           [Bacillus anthracis str. Vollum]
 gi|254761661|ref|ZP_05213679.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein
           [Bacillus anthracis str. Australia 94]
 gi|30253533|gb|AAP24075.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein
           [Bacillus anthracis str. Ames]
 gi|47500421|gb|AAT29097.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein
           [Bacillus anthracis str. 'Ames Ancestor']
 gi|49176983|gb|AAT52359.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein
           [Bacillus anthracis str. Sterne]
 gi|49333117|gb|AAT63763.1| probable cytidine/deoxycytidylate deaminase family protein
           [Bacillus thuringiensis serovar konkukian str. 97-27]
 gi|118415020|gb|ABK83439.1| tRNA-adenosine deaminase [Bacillus thuringiensis str. Al Hakam]
 gi|164711027|gb|EDR16593.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein
           [Bacillus anthracis str. A0488]
 gi|167509987|gb|EDR85406.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein
           [Bacillus anthracis str. A0193]
 gi|167529543|gb|EDR92293.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein
           [Bacillus anthracis str. A0442]
 gi|170127540|gb|EDS96414.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein
           [Bacillus anthracis str. A0389]
 gi|170667118|gb|EDT17879.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein
           [Bacillus anthracis str. A0465]
 gi|172080027|gb|EDT65127.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein
           [Bacillus anthracis str. A0174]
 gi|190559558|gb|EDV13551.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein
           [Bacillus anthracis Tsiankovskii-I]
 gi|195990989|gb|EDX54960.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein
           [Bacillus cereus W]
 gi|196021470|gb|EDX60173.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein
           [Bacillus cereus 03BB108]
 gi|196027198|gb|EDX65818.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein
           [Bacillus cereus NVH0597-99]
 gi|218537868|gb|ACK90266.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein
           [Bacillus cereus AH820]
 gi|225787894|gb|ACO28111.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein
           [Bacillus cereus 03BB102]
 gi|227005774|gb|ACP15517.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein
           [Bacillus anthracis str. CDC 684]
 gi|228601062|gb|EEK58629.1| Uncharacterized deaminase yaaJ [Bacillus cereus BGSC 6E1]
 gi|228663775|gb|EEL19352.1| Uncharacterized deaminase yaaJ [Bacillus cereus 95/8201]
 gi|228694177|gb|EEL47857.1| Uncharacterized deaminase yaaJ [Bacillus cereus Rock3-42]
 gi|228815852|gb|EEM62086.1| Uncharacterized deaminase yaaJ [Bacillus thuringiensis serovar
           monterrey BGSC 4AJ1]
 gi|228828142|gb|EEM73868.1| Uncharacterized deaminase yaaJ [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228834389|gb|EEM79928.1| Uncharacterized deaminase yaaJ [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|228846887|gb|EEM91890.1| Uncharacterized deaminase yaaJ [Bacillus thuringiensis serovar
           pulsiensis BGSC 4CC1]
 gi|229268930|gb|ACQ50567.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein
           [Bacillus anthracis str. A0248]
          Length = 166

 Score =  227 bits (579), Expect = 5e-58,   Method: Composition-based stats.
 Identities = 61/151 (40%), Positives = 86/151 (56%), Gaps = 2/151 (1%)

Query: 1   MKKGN--VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           M++     FM  A+EEA+ A    E+P+GAV VLN ++IS A N     +   AHAE+LA
Sbjct: 1   MERDQDIYFMQLAIEEAKKAEAIQEVPIGAVIVLNGEVISAAHNLRETEQRSIAHAELLA 60

Query: 59  IRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
           I   C+ L    L +  LYVTLEPC MCA  I L+R++R+ YGA +PKGG         T
Sbjct: 61  IDEACKKLGTWRLEDATLYVTLEPCPMCAGGIVLSRVKRVVYGAGDPKGGCAGTLMNLLT 120

Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
               +H  E+  G+ E+    ++ +FF+E R
Sbjct: 121 DERFNHQCEVVAGVLEEECGTLLTNFFRELR 151


>gi|311278508|ref|YP_003940739.1| CMP/dCMP deaminase zinc-binding protein [Enterobacter cloacae SCF1]
 gi|308747703|gb|ADO47455.1| CMP/dCMP deaminase zinc-binding protein [Enterobacter cloacae SCF1]
          Length = 165

 Score =  227 bits (579), Expect = 5e-58,   Method: Composition-based stats.
 Identities = 56/147 (38%), Positives = 76/147 (51%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
               +M  AL  AQ A    E+PVGAV V  N++I    NR     D TAHAEI+A+R G
Sbjct: 7   NHEYWMRHALGLAQRAWDEGEVPVGAVLVYQNQVIGEGWNRPIGRHDPTAHAEIMALRQG 66

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
             +L    L +  LYVTLEPC MCA A+  +RI R+ +GA + K G   +          
Sbjct: 67  GLVLQNYRLIDTTLYVTLEPCVMCAGAMVHSRIGRVVFGARDAKTGAAGSLMDVLHHPGM 126

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H  E+  G+       ++ DFF+ RR
Sbjct: 127 NHRVEVTEGVLAGECSAMLSDFFRARR 153


>gi|42779100|ref|NP_976347.1| cytidine/deoxycytidylate deaminase zinc-binding domain-containing
           protein [Bacillus cereus ATCC 10987]
 gi|42735015|gb|AAS38955.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein
           [Bacillus cereus ATCC 10987]
          Length = 166

 Score =  227 bits (579), Expect = 5e-58,   Method: Composition-based stats.
 Identities = 61/151 (40%), Positives = 86/151 (56%), Gaps = 2/151 (1%)

Query: 1   MKKGN--VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           M++     FM  A+EEA+ A    E+P+GAV VLN ++IS A N     +   AHAE+LA
Sbjct: 1   MERDQDIYFMQLAIEEAKKAEAIQEVPIGAVIVLNGEVISVAHNLRETEQRSIAHAELLA 60

Query: 59  IRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
           I   C+ L    L +  LYVTLEPC MCA  I L+R++R+ YGAS+PKGG         T
Sbjct: 61  IDEACKKLGTWRLEDATLYVTLEPCPMCAGGIVLSRVKRVVYGASDPKGGCAGTLMNLLT 120

Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
               +H  E+  G+ E+    ++ +FF+  R
Sbjct: 121 DERFNHQCEVVAGVLEEECGTLLTNFFRALR 151


>gi|302384616|ref|YP_003820438.1| CMP/dCMP deaminase zinc-binding protein [Clostridium
           saccharolyticum WM1]
 gi|302195244|gb|ADL02815.1| CMP/dCMP deaminase zinc-binding protein [Clostridium
           saccharolyticum WM1]
          Length = 164

 Score =  227 bits (579), Expect = 5e-58,   Method: Composition-based stats.
 Identities = 55/149 (36%), Positives = 77/149 (51%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M     +M  A+ +A+ A    E+P+G V V  +KII+R  NR    K+V +HAEI AIR
Sbjct: 1   MTIDEKYMRAAIRQAEKAGAMGEVPIGCVIVYEDKIIARGYNRRTIDKNVLSHAEINAIR 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
             CR +    L    +YVTLEPC MCA AI  ARI ++  G  N K G   +    +   
Sbjct: 61  KACRKVGDWRLEGCTMYVTLEPCPMCAGAIVQARIPKVIMGCMNAKAGCAGSVLDLFHQD 120

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  E   G+      ++++DFFK  R
Sbjct: 121 GLNHQVETESGVLGDECSRLMKDFFKALR 149


>gi|282918346|ref|ZP_06326083.1| tRNA-adenosine deaminase [Staphylococcus aureus subsp. aureus C427]
 gi|282317480|gb|EFB47852.1| tRNA-adenosine deaminase [Staphylococcus aureus subsp. aureus C427]
          Length = 156

 Score =  227 bits (579), Expect = 5e-58,   Method: Composition-based stats.
 Identities = 55/149 (36%), Positives = 84/149 (56%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M     FM+ A+EEA+ AA   E+P+GA+   ++++I+RA N    L+  TAHAE +AI 
Sbjct: 1   MTNDIYFMTLAIEEAKKAAQLGEVPIGAIITKDDEVIARANNLRETLQQPTAHAEHIAIE 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              ++L    L +  LYVTLEPC MCA  I ++RI R+ YGA +PKGG   +       +
Sbjct: 61  RAAKVLGSWRLEDCTLYVTLEPCVMCAGTIVMSRIPRVVYGADDPKGGCSGSLMNLLQQS 120

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H   +  G+ ++    ++  FFK  R
Sbjct: 121 NFNHRAIVDKGVLKEACSTLLTTFFKNLR 149


>gi|225181888|ref|ZP_03735323.1| CMP/dCMP deaminase zinc-binding [Dethiobacter alkaliphilus AHT 1]
 gi|225167402|gb|EEG76218.1| CMP/dCMP deaminase zinc-binding [Dethiobacter alkaliphilus AHT 1]
          Length = 158

 Score =  227 bits (579), Expect = 6e-58,   Method: Composition-based stats.
 Identities = 61/147 (41%), Positives = 82/147 (55%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
               FM  AL+EAQ A  + EIP+GAV V +  II+R  NR  EL D TAHAEIL +R  
Sbjct: 2   TDQDFMREALKEAQLAFEKGEIPIGAVLVRDGNIIARDHNRREELDDPTAHAEILVLREA 61

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
            R L    LP   LYVT+EPC MCA  +  AR+ R+ YGA++ K G + +          
Sbjct: 62  GRTLGGWRLPNTTLYVTIEPCPMCAGGLVQARVARVVYGAADIKAGAVHSLYTVTEDERL 121

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H  E+  G+  +    I++ FF+ RR
Sbjct: 122 NHRLEVTGGVLAEECADIMRTFFRSRR 148


>gi|297582358|ref|YP_003698138.1| CMP/dCMP deaminase zinc-binding protein [Bacillus selenitireducens
           MLS10]
 gi|297140815|gb|ADH97572.1| CMP/dCMP deaminase zinc-binding protein [Bacillus selenitireducens
           MLS10]
          Length = 174

 Score =  227 bits (579), Expect = 6e-58,   Method: Composition-based stats.
 Identities = 57/147 (38%), Positives = 77/147 (52%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
           K   +M  AL EA  A    E+P+GAV V ++ II+R  N     +  T HAE++AI   
Sbjct: 8   KDEAYMKEALTEADKAEAIGEVPIGAVIVKDDIIIARGYNERETKQRATGHAELVAIEEA 67

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
           CRIL    L    LYVTLEPC MCA AI  +RI R+ YGA +PKGG              
Sbjct: 68  CRILKTWRLEGCTLYVTLEPCPMCAGAIVQSRIDRVVYGADDPKGGSCGTVVNLLDEPKF 127

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H+P +  G  ++ +   +  FF+  R
Sbjct: 128 NHAPLVTSGTLKEEAADRLSSFFRALR 154


>gi|172056061|ref|YP_001812521.1| CMP/dCMP deaminase zinc-binding [Exiguobacterium sibiricum 255-15]
 gi|171988582|gb|ACB59504.1| CMP/dCMP deaminase zinc-binding [Exiguobacterium sibiricum 255-15]
          Length = 169

 Score =  226 bits (578), Expect = 6e-58,   Method: Composition-based stats.
 Identities = 55/149 (36%), Positives = 81/149 (54%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M++   +M  A+EEA+ A    E+P+G V V  +++I+   N        TAHAE+LAI 
Sbjct: 2   MERHEHYMRLAIEEAKKAKAIGEVPIGCVIVKGDEVIATGYNHRETNHQATAHAELLAIE 61

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
             C  L+   L   +LYVTLEPC MCA AI L+RI  + +GA +PKGG            
Sbjct: 62  EACNKLANWRLEGCELYVTLEPCPMCAGAIMLSRIEHVIFGAVDPKGGCCGTLMNLVQDE 121

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  ++  G+ EQ   +++  FF+E R
Sbjct: 122 RFNHVSQLTGGVLEQECGEMLTSFFRELR 150


>gi|229027869|ref|ZP_04184026.1| Uncharacterized deaminase yaaJ [Bacillus cereus AH1271]
 gi|228733445|gb|EEL84270.1| Uncharacterized deaminase yaaJ [Bacillus cereus AH1271]
          Length = 166

 Score =  226 bits (578), Expect = 7e-58,   Method: Composition-based stats.
 Identities = 61/148 (41%), Positives = 85/148 (57%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
            +   FM  A+EEA+ A    E+P+GAV VLN ++IS A N     +   AHAE+LAI  
Sbjct: 4   DQDIYFMQLAIEEAKKAEAIQEVPIGAVIVLNGEVISVAHNLRETEQRSIAHAELLAIDE 63

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
            C+ L    L +  LYVTLEPC MCA  I L+R++R+ YGAS+PKGG         T   
Sbjct: 64  ACKKLGTWRLEDATLYVTLEPCPMCAGGIVLSRVKRVVYGASDPKGGCAGTLMNLLTDER 123

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H  E+  G+ E+    ++ +FF+E R
Sbjct: 124 FNHQCEVVAGVLEKECGTLLTNFFRELR 151


>gi|125974987|ref|YP_001038897.1| tRNA-adenosine deaminase [Clostridium thermocellum ATCC 27405]
 gi|256003803|ref|ZP_05428790.1| CMP/dCMP deaminase zinc-binding [Clostridium thermocellum DSM 2360]
 gi|281418595|ref|ZP_06249614.1| CMP/dCMP deaminase zinc-binding [Clostridium thermocellum JW20]
 gi|125715212|gb|ABN53704.1| tRNA-adenosine deaminase [Clostridium thermocellum ATCC 27405]
 gi|255992141|gb|EEU02236.1| CMP/dCMP deaminase zinc-binding [Clostridium thermocellum DSM 2360]
 gi|281407679|gb|EFB37938.1| CMP/dCMP deaminase zinc-binding [Clostridium thermocellum JW20]
 gi|316939149|gb|ADU73183.1| CMP/dCMP deaminase zinc-binding protein [Clostridium thermocellum
           DSM 1313]
          Length = 161

 Score =  226 bits (578), Expect = 7e-58,   Method: Composition-based stats.
 Identities = 61/147 (41%), Positives = 84/147 (57%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
             + FM  AL+EA  A  +NE P+GAV V +  II+R  N+     D T HAE+  IR  
Sbjct: 7   SHHWFMREALKEAYKAYGKNETPIGAVMVKDGSIIARGHNQKELTNDPTNHAEMAVIREA 66

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
           C  L    L + DLYVTLEPCTMCA AI  AR+ RL+ G+ +PK G   +      +   
Sbjct: 67  CAKLGTWRLNDCDLYVTLEPCTMCAGAIIQARVGRLFIGSLDPKAGAAGSVIDVLKVDAF 126

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H  E+  GI ++   +I+++FFKE R
Sbjct: 127 NHRVEVTYGILQEECSEILKNFFKELR 153


>gi|291618438|ref|YP_003521180.1| TadA [Pantoea ananatis LMG 20103]
 gi|291153468|gb|ADD78052.1| TadA [Pantoea ananatis LMG 20103]
          Length = 171

 Score =  226 bits (578), Expect = 7e-58,   Method: Composition-based stats.
 Identities = 57/148 (38%), Positives = 81/148 (54%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           ++   +M  AL  AQ A  + E+PVGAV V  +++I    NR     D TAHAEI+A+R 
Sbjct: 11  EQDEYWMRRALTLAQRAWEQGEVPVGAVLVQGDRVIGEGWNRPIGQHDPTAHAEIMALRQ 70

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
           G ++L    L    LYVTLEPC MCA A+  +RI RL YGA + K G   +         
Sbjct: 71  GGKVLENYRLLNTTLYVTLEPCIMCAGAMVHSRIGRLVYGAHDVKTGAAGSLIDILGHPG 130

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H   ++ G+ E+    ++ DFF+ RR
Sbjct: 131 MNHQVALHQGVLEEECAAMLSDFFRMRR 158


>gi|332754092|gb|EGJ84463.1| tRNA-specific adenosine deaminase [Shigella flexneri 4343-70]
          Length = 178

 Score =  226 bits (578), Expect = 7e-58,   Method: Composition-based stats.
 Identities = 57/147 (38%), Positives = 78/147 (53%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
               +M  AL  A+ A    E+PVGAV V NN++I    NR     D TAHAEI+A+R G
Sbjct: 18  SHEYWMRHALTLAKRAWDEREVPVGAVLVHNNRVIGEGWNRPIGRHDPTAHAEIMALRQG 77

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
             ++    L +  LYVTLEPC MCA A+  +RI R+ +GA + K G + +          
Sbjct: 78  GLVMQNYRLIDATLYVTLEPCVMCAGAMIHSRIGRVVFGARDAKTGAVGSLMDVLHHPGM 137

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H  EI  GI       ++ DFF+ RR
Sbjct: 138 NHRVEITEGILADECAALLSDFFRMRR 164


>gi|20806575|ref|NP_621746.1| cytosine/adenosine deaminase [Thermoanaerobacter tengcongensis MB4]
 gi|20515016|gb|AAM23350.1| Cytosine/adenosine deaminases [Thermoanaerobacter tengcongensis
           MB4]
          Length = 148

 Score =  226 bits (578), Expect = 8e-58,   Method: Composition-based stats.
 Identities = 64/145 (44%), Positives = 87/145 (60%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           N FM  AL+EA+ +    E+PVGAV V + +II+R  N+    KD TAHAEI+AIR  CR
Sbjct: 3   NKFMEEALKEAKKSYELGEVPVGAVIVKDGEIIARGHNQKESSKDATAHAEIIAIREACR 62

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
            L    L +  LYVTLEPC MCA AI  ARI+R+Y G  +PK G   +            
Sbjct: 63  RLGSWRLEDCSLYVTLEPCPMCAGAIVEARIKRVYIGTESPKEGAAGSVINILNNKELGT 122

Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149
           S E+Y GI E+ ++++++ FF+  R
Sbjct: 123 STEVYFGIMEEEAKELLKKFFENLR 147


>gi|257062766|ref|YP_003142438.1| tRNA-adenosine deaminase [Slackia heliotrinireducens DSM 20476]
 gi|256790419|gb|ACV21089.1| tRNA-adenosine deaminase [Slackia heliotrinireducens DSM 20476]
          Length = 172

 Score =  226 bits (578), Expect = 8e-58,   Method: Composition-based stats.
 Identities = 54/149 (36%), Positives = 82/149 (55%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           ++    FM  A+E+A  A L  E+P+GAV V   +II+   N     +D +AHAE  AI 
Sbjct: 13  LEDDERFMRAAIEQAHLAELDGEVPIGAVVVCQGEIIAEGRNHRETDQDPSAHAEFSAIM 72

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              R L +  LP+  +YVTLEPC MC+  +  ARI R  YGA +PK G +    Q +   
Sbjct: 73  QASRELERWRLPDCTVYVTLEPCIMCSGLMHQARIGRCVYGAPDPKAGALGTLYQVHADE 132

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H+ E+  G+ +    ++++DFF  +R
Sbjct: 133 RLNHTFEVTSGVLQDECARLLKDFFARKR 161


>gi|260598940|ref|YP_003211511.1| tRNA-specific adenosine deaminase [Cronobacter turicensis z3032]
 gi|260218117|emb|CBA32906.1| tRNA-specific adenosine deaminase [Cronobacter turicensis z3032]
          Length = 196

 Score =  226 bits (577), Expect = 9e-58,   Method: Composition-based stats.
 Identities = 56/147 (38%), Positives = 76/147 (51%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
               +M  AL  AQ A    E+PVGAV V NN++I    NR     D TAHAEI+A+R G
Sbjct: 30  THEYWMRHALTLAQRAWDEGEVPVGAVLVHNNQVIGEGWNRPIGRHDPTAHAEIMALRQG 89

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
             +L    L +  LYVTLEPC MCA A+   RI  L +GA + K G + +          
Sbjct: 90  GLVLQNYRLLDTTLYVTLEPCVMCAGAMVHGRIGTLVFGARDAKTGAVGSLMDITGHPGM 149

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H  ++  GI       ++  FF++RR
Sbjct: 150 NHQVQVIEGILATECSAMLSAFFRQRR 176


>gi|309775004|ref|ZP_07670019.1| cytidine/deoxycytidylate deaminase family protein
           [Erysipelotrichaceae bacterium 3_1_53]
 gi|308917222|gb|EFP62947.1| cytidine/deoxycytidylate deaminase family protein
           [Erysipelotrichaceae bacterium 3_1_53]
          Length = 162

 Score =  226 bits (577), Expect = 9e-58,   Method: Composition-based stats.
 Identities = 62/149 (41%), Positives = 95/149 (63%), Gaps = 2/149 (1%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           MK+   +M  A++EA  A +++E+P+G V V ++KII+R  N     +    HAEI+AI+
Sbjct: 12  MKED--YMRAAIKEAVKANMKDEVPIGCVIVKDDKIIARGHNLRESKQQSINHAEIIAIQ 69

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
             C+ +    L + DLYVTLEPC MCA AI  +RIR + YGAS+PKGG I++    Y   
Sbjct: 70  KACKKIGSWRLEDCDLYVTLEPCCMCAGAILQSRIRTVIYGASDPKGGSIDSTMHMYEQP 129

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H P +Y G+ ++   Q++++FFKE+R
Sbjct: 130 GFNHYPCVYSGVLQEECSQLLKNFFKEKR 158


>gi|319891528|ref|YP_004148403.1| tRNA-specific adenosine-34 deaminase [Staphylococcus
           pseudintermedius HKU10-03]
 gi|317161224|gb|ADV04767.1| tRNA-specific adenosine-34 deaminase [Staphylococcus
           pseudintermedius HKU10-03]
          Length = 157

 Score =  226 bits (577), Expect = 9e-58,   Method: Composition-based stats.
 Identities = 57/149 (38%), Positives = 81/149 (54%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M     +MS ALEEA+ AA + E+P+GAV V N KII+RA N     +  TAHAE LA+ 
Sbjct: 1   MTSHQYYMSIALEEAKKAAKKGEVPIGAVVVKNGKIIARAHNLRETDQSPTAHAEHLAME 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
                L    L    LYVTLEPC MCA  I ++R+  + +GA +PKGG + +       +
Sbjct: 61  RAAAQLGTWRLEGCTLYVTLEPCVMCAGTIVMSRVDTVVFGAMDPKGGCVGSLMNLVQDS 120

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H   +  G+      +I++ FF+  R
Sbjct: 121 RMNHRASVVSGVLAYSCGEILRQFFRALR 149


>gi|313900948|ref|ZP_07834438.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Clostridium sp. HGF2]
 gi|312954368|gb|EFR36046.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Clostridium sp. HGF2]
          Length = 151

 Score =  225 bits (576), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 61/149 (40%), Positives = 90/149 (60%), Gaps = 2/149 (1%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           MK    +M  AL EA+ A   +E+P+G V V ++KII+R  N     +    HAEI+AI+
Sbjct: 1   MK--EEYMRAALREAEKAKKIDEVPIGCVIVKDDKIIARGHNLRETKQQSINHAEIIAIQ 58

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
             C+ +    L + DLYVTLEPC MCA AI  +RIR + YG ++PKGG IE+    Y   
Sbjct: 59  KACKKVGSWRLEDCDLYVTLEPCCMCAGAILQSRIRTVIYGTADPKGGSIESTLHMYEQP 118

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H P++  G+ +    Q++++FFKE+R
Sbjct: 119 GYNHYPKVESGVLQNECSQLLKNFFKEKR 147


>gi|331086590|ref|ZP_08335668.1| hypothetical protein HMPREF0987_01971 [Lachnospiraceae bacterium
           9_1_43BFAA]
 gi|330410423|gb|EGG89855.1| hypothetical protein HMPREF0987_01971 [Lachnospiraceae bacterium
           9_1_43BFAA]
          Length = 163

 Score =  225 bits (576), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 51/149 (34%), Positives = 83/149 (55%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M +   +M  A+ +A+ A    E+P+G V V  +KII+R  NR    K+  AHAE++AI+
Sbjct: 1   MNQDEKYMKEAIRQAKKAYALKEVPIGCVIVYQDKIIARGYNRRTIDKNTLAHAELIAIK 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              R +    L +  +YVTLEPC MC+ AI  +R++++  G  NPK G   +      + 
Sbjct: 61  KASRKMDDWRLEDCTMYVTLEPCQMCSGAIVQSRMKKVVVGCMNPKAGCAGSIFNLLQVP 120

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  E+  G+ E+   Q+++ FF+E R
Sbjct: 121 QFNHQVELEIGVLEEECSQLMKSFFRELR 149


>gi|90108580|pdb|1Z3A|A Chain A, Crystal Structure Of Trna Adenosine Deaminase Tada From
           Escherichia Coli
 gi|90108581|pdb|1Z3A|B Chain B, Crystal Structure Of Trna Adenosine Deaminase Tada From
           Escherichia Coli
          Length = 168

 Score =  225 bits (576), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 57/147 (38%), Positives = 77/147 (52%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
               +M  AL  A+ A    E+PVGAV V NN++I    NR     D TAHAEI+A+R G
Sbjct: 8   SHEYWMRHALTLAKRAWDEREVPVGAVLVHNNRVIGEGWNRPIGRHDPTAHAEIMALRQG 67

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
             ++    L +  LYVTLEPC MCA A+  +RI R+ +GA + K G   +          
Sbjct: 68  GLVMQNYRLIDATLYVTLEPCVMCAGAMIHSRIGRVVFGARDAKTGAAGSLMDVLHHPGM 127

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H  EI  GI       ++ DFF+ RR
Sbjct: 128 NHRVEITEGILADECAALLSDFFRMRR 154


>gi|283778333|ref|YP_003369088.1| CMP/dCMP deaminase zinc-binding protein [Pirellula staleyi DSM
           6068]
 gi|283436786|gb|ADB15228.1| CMP/dCMP deaminase zinc-binding protein [Pirellula staleyi DSM
           6068]
          Length = 155

 Score =  225 bits (576), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 56/147 (38%), Positives = 84/147 (57%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
             + +M  AL EA  A   +E+PVGAV V + ++I+ A N+   L D TAHAE++AI   
Sbjct: 4   THDYYMQLALNEASAAFDEDEVPVGAVIVHSGRVIAAAHNQREALHDPTAHAEMIAITQA 63

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
              +    L    LYVTLEPC MC+ AI  AR+  + YGA++PK G + +     T    
Sbjct: 64  AESMGDWRLEGCTLYVTLEPCIMCSGAILQARVPTVVYGATDPKAGAVGSLFHLLTDERL 123

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H  ++ PGI  + S +I+  FF+++R
Sbjct: 124 NHRCQVVPGILAKPSGEILTRFFQQQR 150


>gi|251788710|ref|YP_003003431.1| CMP/dCMP deaminase zinc-binding [Dickeya zeae Ech1591]
 gi|247537331|gb|ACT05952.1| CMP/dCMP deaminase zinc-binding [Dickeya zeae Ech1591]
          Length = 168

 Score =  225 bits (576), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 54/147 (36%), Positives = 74/147 (50%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
               +M  AL  AQ A    E+PVGAV V    +I    NR     D TAHAEI+A++ G
Sbjct: 6   DDEFWMRHALSLAQRAWDEGEVPVGAVLVQGGNVIGEGWNRPIGRHDPTAHAEIMALQQG 65

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
            + L    L +  LY+TLEPC MCA A+  +RI RL YGA++ K G   +          
Sbjct: 66  GQTLQNYRLLDTTLYITLEPCVMCAGAMIHSRISRLVYGAADAKTGAAGSLVDILRHPGI 125

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H   I  G+      +++  FF+ RR
Sbjct: 126 NHHIMITDGVLADECAELLSRFFRMRR 152


>gi|323465305|gb|ADX77458.1| tRNA-specific adenosine deaminase [Staphylococcus pseudintermedius
           ED99]
          Length = 157

 Score =  225 bits (576), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 57/149 (38%), Positives = 81/149 (54%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M     +MS ALEEA+ AA + E+P+GAV V N KII+RA N     +  TAHAE LA+ 
Sbjct: 1   MTSHQYYMSIALEEARKAAKKGEVPIGAVVVKNGKIIARAHNLRETDQSPTAHAEHLAME 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
                L    L    LYVTLEPC MCA  I ++R+  + +GA +PKGG + +       +
Sbjct: 61  RAAAQLGTWRLEGCTLYVTLEPCVMCAGTIVMSRVDTVVFGAMDPKGGCVGSLMNLVQDS 120

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H   +  G+      +I++ FF+  R
Sbjct: 121 RMNHRASVVSGVLAYSCGEILRQFFRALR 149


>gi|145698301|ref|NP_417054.2| tRNA-specific adenosine deaminase [Escherichia coli str. K-12
           substr. MG1655]
 gi|170082169|ref|YP_001731489.1| tRNA-specific adenosine deaminase [Escherichia coli str. K-12
           substr. DH10B]
 gi|170682913|ref|YP_001744748.1| tRNA-specific adenosine deaminase [Escherichia coli SMS-3-5]
 gi|191167978|ref|ZP_03029780.1| tRNA-specific adenosine deaminase [Escherichia coli B7A]
 gi|194437606|ref|ZP_03069702.1| tRNA-specific adenosine deaminase [Escherichia coli 101-1]
 gi|238901724|ref|YP_002927520.1| tRNA-specific adenosine deaminase [Escherichia coli BW2952]
 gi|253772543|ref|YP_003035374.1| tRNA-specific adenosine deaminase [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|256021756|ref|ZP_05435621.1| tRNA-specific adenosine deaminase [Escherichia sp. 4_1_40B]
 gi|260856653|ref|YP_003230544.1| tRNA-specific adenosine deaminase [Escherichia coli O26:H11 str.
           11368]
 gi|260869246|ref|YP_003235648.1| tRNA-specific adenosine deaminase [Escherichia coli O111:H- str.
           11128]
 gi|297516926|ref|ZP_06935312.1| tRNA-specific adenosine deaminase [Escherichia coli OP50]
 gi|307139195|ref|ZP_07498551.1| tRNA-specific adenosine deaminase [Escherichia coli H736]
 gi|307313870|ref|ZP_07593486.1| CMP/dCMP deaminase zinc-binding [Escherichia coli W]
 gi|150421688|sp|P68398|TADA_ECOLI RecName: Full=tRNA-specific adenosine deaminase
 gi|150421691|sp|P68397|TADA_SHIFL RecName: Full=tRNA-specific adenosine deaminase
 gi|145693172|gb|AAC75612.2| tRNA-specific adenosine deaminase [Escherichia coli str. K-12
           substr. MG1655]
 gi|169890004|gb|ACB03711.1| tRNA-specific adenosine deaminase [Escherichia coli str. K-12
           substr. DH10B]
 gi|170520631|gb|ACB18809.1| tRNA-specific adenosine deaminase [Escherichia coli SMS-3-5]
 gi|190901985|gb|EDV61732.1| tRNA-specific adenosine deaminase [Escherichia coli B7A]
 gi|194423412|gb|EDX39403.1| tRNA-specific adenosine deaminase [Escherichia coli 101-1]
 gi|238863717|gb|ACR65715.1| tRNA-specific adenosine deaminase [Escherichia coli BW2952]
 gi|253323587|gb|ACT28189.1| CMP/dCMP deaminase zinc-binding [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|257755302|dbj|BAI26804.1| tRNA-specific adenosine deaminase [Escherichia coli O26:H11 str.
           11368]
 gi|257765602|dbj|BAI37097.1| tRNA-specific adenosine deaminase [Escherichia coli O111:H- str.
           11128]
 gi|260448361|gb|ACX38783.1| CMP/dCMP deaminase zinc-binding protein [Escherichia coli DH1]
 gi|306906371|gb|EFN36886.1| CMP/dCMP deaminase zinc-binding [Escherichia coli W]
 gi|313651052|gb|EFS15452.1| tRNA-specific adenosine deaminase [Shigella flexneri 2a str. 2457T]
 gi|313848716|emb|CAQ32934.2| tRNA-specific adenosine deaminase monomer, subunit of tRNA-specific
           adenosine deaminase [Escherichia coli BL21(DE3)]
 gi|315061878|gb|ADT76205.1| tRNA-specific adenosine deaminase [Escherichia coli W]
 gi|320186358|gb|EFW61092.1| tRNA-specific adenosine-34 deaminase [Shigella flexneri CDC 796-83]
 gi|320200123|gb|EFW74712.1| tRNA-specific adenosine-34 deaminase [Escherichia coli EC4100B]
 gi|323377541|gb|ADX49809.1| CMP/dCMP deaminase zinc-binding protein [Escherichia coli KO11]
 gi|323936299|gb|EGB32590.1| cytidine and deoxycytidylate deaminase zinc-binding protein
           [Escherichia coli E1520]
 gi|323941178|gb|EGB37363.1| cytidine and deoxycytidylate deaminase zinc-binding protein
           [Escherichia coli E482]
 gi|323944616|gb|EGB40684.1| cytidine and deoxycytidylate deaminase zinc-binding protein
           [Escherichia coli H120]
 gi|323961174|gb|EGB56787.1| cytidine and deoxycytidylate deaminase zinc-binding protein
           [Escherichia coli H489]
 gi|323971115|gb|EGB66362.1| cytidine and deoxycytidylate deaminase zinc-binding protein
           [Escherichia coli TA007]
 gi|324113086|gb|EGC07062.1| cytidine and deoxycytidylate deaminase zinc-binding protein
           [Escherichia fergusonii B253]
 gi|324118231|gb|EGC12127.1| cytidine and deoxycytidylate deaminase zinc-binding protein
           [Escherichia coli E1167]
 gi|332092598|gb|EGI97670.1| tRNA-specific adenosine deaminase [Shigella boydii 3594-74]
 gi|332344434|gb|AEE57768.1| tRNA-specific adenosine deaminase [Escherichia coli UMNK88]
 gi|332756134|gb|EGJ86485.1| tRNA-specific adenosine deaminase [Shigella flexneri 2747-71]
 gi|332765914|gb|EGJ96125.1| tRNA-specific adenosine deaminase monomer [Shigella flexneri
           2930-71]
 gi|333002351|gb|EGK21915.1| tRNA-specific adenosine deaminase [Shigella flexneri K-272]
 gi|333016173|gb|EGK35505.1| tRNA-specific adenosine deaminase [Shigella flexneri K-227]
 gi|333016472|gb|EGK35803.1| tRNA-specific adenosine deaminase [Shigella flexneri K-304]
          Length = 167

 Score =  225 bits (576), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 57/147 (38%), Positives = 77/147 (52%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
               +M  AL  A+ A    E+PVGAV V NN++I    NR     D TAHAEI+A+R G
Sbjct: 7   SHEYWMRHALTLAKRAWDEREVPVGAVLVHNNRVIGEGWNRPIGRHDPTAHAEIMALRQG 66

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
             ++    L +  LYVTLEPC MCA A+  +RI R+ +GA + K G   +          
Sbjct: 67  GLVMQNYRLIDATLYVTLEPCVMCAGAMIHSRIGRVVFGARDAKTGAAGSLMDVLHHPGM 126

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H  EI  GI       ++ DFF+ RR
Sbjct: 127 NHRVEITEGILADECAALLSDFFRMRR 153


>gi|95928326|ref|ZP_01311074.1| CMP/dCMP deaminase, zinc-binding [Desulfuromonas acetoxidans DSM
           684]
 gi|95135597|gb|EAT17248.1| CMP/dCMP deaminase, zinc-binding [Desulfuromonas acetoxidans DSM
           684]
          Length = 165

 Score =  225 bits (576), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 57/148 (38%), Positives = 85/148 (57%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
            +   +M  AL+ A+ A    E+PVGAV VLN K+I+ AGNR    +D TAHAE++A+R 
Sbjct: 4   SQDEHYMRRALDLARQAEQLGEVPVGAVVVLNGKVIAAAGNRRETWQDPTAHAELIALRE 63

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
             + +    L E  LYVTLEPC MC   I L+RI RL +GA +P+ G + +         
Sbjct: 64  AAKRIDSWRLEEATLYVTLEPCIMCMGGIILSRIPRLVFGARDPRVGAVGSVFDLADDER 123

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H  E+  G+  +   +I+ +FF++ R
Sbjct: 124 FNHRVEVSEGVLAEECSEILSNFFRQLR 151


>gi|74313082|ref|YP_311501.1| tRNA-specific adenosine deaminase [Shigella sonnei Ss046]
 gi|73856559|gb|AAZ89266.1| putative deaminase [Shigella sonnei Ss046]
 gi|323169455|gb|EFZ55128.1| tRNA-specific adenosine deaminase [Shigella sonnei 53G]
          Length = 178

 Score =  225 bits (576), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 57/147 (38%), Positives = 77/147 (52%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
               +M  AL  A+ A    E+PVGAV V NN++I    NR     D TAHAEI+A+R G
Sbjct: 18  SHEYWMRHALTLAKRAWDEREVPVGAVLVHNNRVIGEGWNRPIGRHDPTAHAEIMALRQG 77

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
             ++    L +  LYVTLEPC MCA A+  +RI R+ +GA + K G   +          
Sbjct: 78  GLVMQNYRLIDATLYVTLEPCVMCAGAMIHSRIGRVVFGARDAKTGAAGSLMDVLHHPGM 137

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H  EI  GI       ++ DFF+ RR
Sbjct: 138 NHRVEITEGILADECAALLSDFFRMRR 164


>gi|24113886|ref|NP_708396.1| tRNA-specific adenosine deaminase [Shigella flexneri 2a str. 301]
 gi|30063946|ref|NP_838117.1| tRNA-specific adenosine deaminase [Shigella flexneri 2a str. 2457T]
 gi|82545011|ref|YP_408958.1| tRNA-specific adenosine deaminase [Shigella boydii Sb227]
 gi|89109365|ref|AP_003145.1| tRNA-specific adenosine deaminase [Escherichia coli str. K-12
           substr. W3110]
 gi|157162036|ref|YP_001459354.1| tRNA-specific adenosine deaminase [Escherichia coli HS]
 gi|187730453|ref|YP_001881338.1| tRNA-specific adenosine deaminase [Shigella boydii CDC 3083-94]
 gi|188496019|ref|ZP_03003289.1| tRNA-specific adenosine deaminase [Escherichia coli 53638]
 gi|209920038|ref|YP_002294122.1| tRNA-specific adenosine deaminase [Escherichia coli SE11]
 gi|218547914|ref|YP_002381705.1| tRNA-specific adenosine deaminase [Escherichia fergusonii ATCC
           35469]
 gi|218555084|ref|YP_002387997.1| tRNA-specific adenosine deaminase [Escherichia coli IAI1]
 gi|218696186|ref|YP_002403853.1| tRNA-specific adenosine deaminase [Escherichia coli 55989]
 gi|254162534|ref|YP_003045642.1| tRNA-specific adenosine deaminase [Escherichia coli B str. REL606]
 gi|256017292|ref|ZP_05431157.1| tRNA-specific adenosine deaminase [Shigella sp. D9]
 gi|293410974|ref|ZP_06654550.1| tRNA-specific adenosine deaminase [Escherichia coli B354]
 gi|300817664|ref|ZP_07097879.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Escherichia coli MS 107-1]
 gi|300820763|ref|ZP_07100913.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Escherichia coli MS 119-7]
 gi|300904258|ref|ZP_07122117.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Escherichia coli MS 84-1]
 gi|300920727|ref|ZP_07137133.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Escherichia coli MS 115-1]
 gi|300927064|ref|ZP_07142816.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Escherichia coli MS 182-1]
 gi|300927685|ref|ZP_07143253.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Escherichia coli MS 187-1]
 gi|300951723|ref|ZP_07165542.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Escherichia coli MS 116-1]
 gi|300958800|ref|ZP_07170912.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Escherichia coli MS 175-1]
 gi|301022068|ref|ZP_07185995.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Escherichia coli MS 196-1]
 gi|301024846|ref|ZP_07188483.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Escherichia coli MS 69-1]
 gi|301302925|ref|ZP_07209053.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Escherichia coli MS 124-1]
 gi|301330339|ref|ZP_07222986.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Escherichia coli MS 78-1]
 gi|301648323|ref|ZP_07248063.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Escherichia coli MS 146-1]
 gi|312973195|ref|ZP_07787367.1| tRNA-specific adenosine deaminase [Escherichia coli 1827-70]
 gi|331643182|ref|ZP_08344317.1| tRNA-specific adenosine deaminase [Escherichia coli H736]
 gi|331664126|ref|ZP_08365036.1| tRNA-specific adenosine deaminase [Escherichia coli TA143]
 gi|331669308|ref|ZP_08370156.1| tRNA-specific adenosine deaminase [Escherichia coli TA271]
 gi|331678554|ref|ZP_08379229.1| tRNA-specific adenosine deaminase [Escherichia coli H591]
 gi|331684208|ref|ZP_08384804.1| tRNA-specific adenosine deaminase [Escherichia coli H299]
 gi|332278286|ref|ZP_08390699.1| tRNA-specific adenosine deaminase [Shigella sp. D9]
 gi|296183|emb|CAA51064.1| unnamed protein product [Escherichia coli]
 gi|987637|dbj|BAA10909.1| YFHC-ECOLI protein [Escherichia coli K-12]
 gi|1033148|gb|AAA79821.1| alternate name yfhC; orf178 of GenBank Accession Number X72336
           [Escherichia coli str. K-12 substr. MG1655]
 gi|24052985|gb|AAN44103.1| putative deaminase [Shigella flexneri 2a str. 301]
 gi|30042202|gb|AAP17927.1| putative deaminase [Shigella flexneri 2a str. 2457T]
 gi|81246422|gb|ABB67130.1| putative deaminase [Shigella boydii Sb227]
 gi|85675450|dbj|BAE76735.1| tRNA-specific adenosine deaminase [Escherichia coli str. K12
           substr. W3110]
 gi|157067716|gb|ABV06971.1| tRNA-specific adenosine deaminase [Escherichia coli HS]
 gi|187427445|gb|ACD06719.1| tRNA-specific adenosine deaminase [Shigella boydii CDC 3083-94]
 gi|188491218|gb|EDU66321.1| tRNA-specific adenosine deaminase [Escherichia coli 53638]
 gi|209913297|dbj|BAG78371.1| putative deaminase [Escherichia coli SE11]
 gi|218352918|emb|CAU98717.1| tRNA-specific adenosine deaminase [Escherichia coli 55989]
 gi|218355455|emb|CAQ88064.1| tRNA-specific adenosine deaminase [Escherichia fergusonii ATCC
           35469]
 gi|218361852|emb|CAQ99452.1| tRNA-specific adenosine deaminase [Escherichia coli IAI1]
 gi|253974435|gb|ACT40106.1| tRNA-specific adenosine deaminase [Escherichia coli B str. REL606]
 gi|253978602|gb|ACT44272.1| tRNA-specific adenosine deaminase [Escherichia coli BL21(DE3)]
 gi|281601959|gb|ADA74943.1| tRNA-specific adenosine deaminase [Shigella flexneri 2002017]
 gi|291471442|gb|EFF13926.1| tRNA-specific adenosine deaminase [Escherichia coli B354]
 gi|299881373|gb|EFI89584.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Escherichia coli MS 196-1]
 gi|300314548|gb|EFJ64332.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Escherichia coli MS 175-1]
 gi|300396377|gb|EFJ79915.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Escherichia coli MS 69-1]
 gi|300403791|gb|EFJ87329.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Escherichia coli MS 84-1]
 gi|300412298|gb|EFJ95608.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Escherichia coli MS 115-1]
 gi|300416948|gb|EFK00259.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Escherichia coli MS 182-1]
 gi|300449007|gb|EFK12627.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Escherichia coli MS 116-1]
 gi|300464238|gb|EFK27731.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Escherichia coli MS 187-1]
 gi|300526516|gb|EFK47585.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Escherichia coli MS 119-7]
 gi|300529652|gb|EFK50714.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Escherichia coli MS 107-1]
 gi|300841860|gb|EFK69620.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Escherichia coli MS 124-1]
 gi|300843673|gb|EFK71433.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Escherichia coli MS 78-1]
 gi|301073599|gb|EFK88405.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Escherichia coli MS 146-1]
 gi|309702891|emb|CBJ02222.1| tRNA-specific adenosine deaminase [Escherichia coli ETEC H10407]
 gi|310331790|gb|EFP99025.1| tRNA-specific adenosine deaminase [Escherichia coli 1827-70]
 gi|315137183|dbj|BAJ44342.1| tRNA-specific adenosine deaminase [Escherichia coli DH1]
 gi|315256586|gb|EFU36554.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Escherichia coli MS 85-1]
 gi|315615821|gb|EFU96453.1| tRNA-specific adenosine deaminase [Escherichia coli 3431]
 gi|320196395|gb|EFW71019.1| tRNA-specific adenosine-34 deaminase [Escherichia coli WV_060327]
 gi|323156217|gb|EFZ42376.1| tRNA-specific adenosine deaminase [Escherichia coli EPECa14]
 gi|323170158|gb|EFZ55811.1| tRNA-specific adenosine deaminase [Escherichia coli LT-68]
 gi|323177311|gb|EFZ62899.1| tRNA-specific adenosine deaminase [Escherichia coli 1180]
 gi|323184561|gb|EFZ69935.1| tRNA-specific adenosine deaminase [Escherichia coli 1357]
 gi|324020017|gb|EGB89236.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Escherichia coli MS 117-3]
 gi|325496361|gb|EGC94220.1| tRNA-specific adenosine deaminase [Escherichia fergusonii ECD227]
 gi|331039980|gb|EGI12200.1| tRNA-specific adenosine deaminase [Escherichia coli H736]
 gi|331059925|gb|EGI31902.1| tRNA-specific adenosine deaminase [Escherichia coli TA143]
 gi|331064502|gb|EGI36413.1| tRNA-specific adenosine deaminase [Escherichia coli TA271]
 gi|331075014|gb|EGI46334.1| tRNA-specific adenosine deaminase [Escherichia coli H591]
 gi|331079160|gb|EGI50362.1| tRNA-specific adenosine deaminase [Escherichia coli H299]
 gi|332100638|gb|EGJ03984.1| tRNA-specific adenosine deaminase [Shigella sp. D9]
 gi|333000545|gb|EGK20124.1| tRNA-specific adenosine deaminase [Shigella flexneri VA-6]
          Length = 178

 Score =  225 bits (576), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 57/147 (38%), Positives = 77/147 (52%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
               +M  AL  A+ A    E+PVGAV V NN++I    NR     D TAHAEI+A+R G
Sbjct: 18  SHEYWMRHALTLAKRAWDEREVPVGAVLVHNNRVIGEGWNRPIGRHDPTAHAEIMALRQG 77

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
             ++    L +  LYVTLEPC MCA A+  +RI R+ +GA + K G   +          
Sbjct: 78  GLVMQNYRLIDATLYVTLEPCVMCAGAMIHSRIGRVVFGARDAKTGAAGSLMDVLHHPGM 137

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H  EI  GI       ++ DFF+ RR
Sbjct: 138 NHRVEITEGILADECAALLSDFFRMRR 164


>gi|271501609|ref|YP_003334635.1| CMP/dCMP deaminase zinc-binding protein [Dickeya dadantii Ech586]
 gi|270345164|gb|ACZ77929.1| CMP/dCMP deaminase zinc-binding protein [Dickeya dadantii Ech586]
          Length = 170

 Score =  225 bits (575), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 55/147 (37%), Positives = 78/147 (53%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
               +M  AL  AQ A    E+PVGAV V  +++I    NR     D TAHAEI+A++ G
Sbjct: 6   DDEFWMRHALSLAQRAWDEGEVPVGAVLVQGDRVIGEGWNRPIGRHDPTAHAEIMALQQG 65

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
            ++L    L +  LY+TLEPC MCA A+  +RI RL YGA++ K G   +          
Sbjct: 66  GQVLQNYRLLDTTLYITLEPCVMCAGAMIHSRITRLVYGAADAKTGAAGSLVDILRHPGM 125

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H   I  G+  Q   +++  FF+ RR
Sbjct: 126 NHQIAITDGVLAQECSELLSRFFRMRR 152


>gi|229194412|ref|ZP_04321217.1| hypothetical protein bcere0001_100 [Bacillus cereus m1293]
 gi|228589068|gb|EEK47081.1| hypothetical protein bcere0001_100 [Bacillus cereus m1293]
          Length = 166

 Score =  225 bits (575), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 60/151 (39%), Positives = 86/151 (56%), Gaps = 2/151 (1%)

Query: 1   MKKGN--VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           M++     FM  A+EEA+ A    E+P+GAV VL+ ++IS A N     +   AHAE+LA
Sbjct: 1   MERDQDIHFMQLAIEEAKKAEAIQEVPIGAVIVLDGEVISVAHNLRETEQRSIAHAELLA 60

Query: 59  IRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
           I   C+ L    L +  LYVTLEPC MCA  I L+R++R+ YGAS+PKGG         T
Sbjct: 61  IDEACKKLGTWRLEDATLYVTLEPCPMCAGGIVLSRVKRVVYGASDPKGGCAGTLMNLLT 120

Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
               +H  E+  G+ E+    ++ +FF+  R
Sbjct: 121 DERFNHQCEVVAGVLEEECGTLLTNFFRALR 151


>gi|163938030|ref|YP_001642914.1| CMP/dCMP deaminase zinc-binding [Bacillus weihenstephanensis KBAB4]
 gi|163860227|gb|ABY41286.1| CMP/dCMP deaminase zinc-binding [Bacillus weihenstephanensis KBAB4]
          Length = 164

 Score =  225 bits (575), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 61/145 (42%), Positives = 84/145 (57%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M++   FM  A+EEA+ A    E+P+GAV VL+ ++IS A N     +   AHAE+LAI 
Sbjct: 1   MERDIYFMQLAIEEAKKAEAIQEVPIGAVIVLDGEVISVAHNLRETEQRSIAHAELLAID 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
             C+ L    L +  LYVTLEPC MCA  I L+RI+R+ YGAS+PKGG         T  
Sbjct: 61  EACKKLGTWRLEDATLYVTLEPCPMCAGGIVLSRIKRVVYGASDPKGGCAGTLMNLLTDE 120

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFF 145
             +H  E+ PG+ E+    ++  FF
Sbjct: 121 RFNHQCEVVPGVLEEECGTLLTIFF 145


>gi|323978411|gb|EGB73496.1| cytidine and deoxycytidylate deaminase zinc-binding protein
           [Escherichia coli TW10509]
          Length = 167

 Score =  225 bits (575), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 57/147 (38%), Positives = 77/147 (52%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
               +M  AL  A+ A    E+PVGAV V NN++I    NR     D TAHAEI+A+R G
Sbjct: 7   SHEYWMRHALTLAKRAWDEREVPVGAVLVHNNRVIGEGWNRPIGRHDPTAHAEIMALRQG 66

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
             ++    L +  LYVTLEPC MCA A+  +RI R+ +GA + K G   +          
Sbjct: 67  GLVMQNYRLIDATLYVTLEPCVMCAGAMIHSRISRVVFGARDAKTGAAGSLMDVLHHPGM 126

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H  EI  GI       ++ DFF+ RR
Sbjct: 127 NHRVEITEGILADECAALLSDFFRMRR 153


>gi|325264602|ref|ZP_08131332.1| cytidine/deoxycytidylate deaminase family protein [Clostridium sp.
           D5]
 gi|324030264|gb|EGB91549.1| cytidine/deoxycytidylate deaminase family protein [Clostridium sp.
           D5]
          Length = 159

 Score =  225 bits (575), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 56/149 (37%), Positives = 80/149 (53%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M     +M  A+ +A+ A    E+P+G V V  +KII R  NR    K+  AHAE+ AIR
Sbjct: 1   MNADEKYMKEAIRQAKKAYALEEVPIGCVIVYQDKIIGRGYNRRTIDKNPLAHAELTAIR 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              + L+   L E  LYVTLEPC MC+ AI  AR++R+  G  NPK G   +      + 
Sbjct: 61  RASKKLNDWRLEECTLYVTLEPCQMCSGAIIQARVQRVVVGCMNPKAGCAGSILNLLEMK 120

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  E+  G+ E+    +++ FFKE R
Sbjct: 121 EFNHQAELTTGVLEKECSTMMKQFFKELR 149


>gi|110806489|ref|YP_690009.1| tRNA-specific adenosine deaminase [Shigella flexneri 5 str. 8401]
 gi|110616037|gb|ABF04704.1| putative deaminase [Shigella flexneri 5 str. 8401]
          Length = 167

 Score =  225 bits (575), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 57/147 (38%), Positives = 77/147 (52%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
               +M  AL  A+ A    E+PVGAV V NN++I    NR     D TAHAEI+A+R G
Sbjct: 7   SHEYWMRHALTLAKRAWDEREVPVGAVLVHNNRVIGEGWNRPIGRHDPTAHAEIMALRQG 66

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
             ++    L +  LYVTLEPC MCA A+  +RI R+ +GA + K G   +          
Sbjct: 67  GLVMQNYRLIDATLYVTLEPCVMCAGAMLHSRIGRVVFGARDAKTGAAGSLMDVLHHPGM 126

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H  EI  GI       ++ DFF+ RR
Sbjct: 127 NHRVEITEGILADECAALLSDFFRMRR 153


>gi|325108107|ref|YP_004269175.1| tRNA-adenosine deaminase [Planctomyces brasiliensis DSM 5305]
 gi|324968375|gb|ADY59153.1| tRNA-adenosine deaminase [Planctomyces brasiliensis DSM 5305]
          Length = 162

 Score =  225 bits (575), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 54/146 (36%), Positives = 81/146 (55%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
              +M  AL+EA  A    E+PVGA+ V +  +I+ A N+   L D TAHAE++A+    
Sbjct: 12  HEEYMRMALDEAVAAFDEKEVPVGAIIVHDGHVIAAAHNQRETLNDPTAHAEMIALTQAA 71

Query: 64  RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123
             L    L +  LYVTLEPC MCA AI  AR+ R+ YG ++ K G   +     +    +
Sbjct: 72  TALESWRLEDCTLYVTLEPCPMCAGAIVQARVPRVVYGTTDLKAGACHSLYSITSDPRLN 131

Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149
           H  E+ PG+     + I+Q+FF+++R
Sbjct: 132 HRSEVLPGVLAPDCKAILQEFFRQQR 157


>gi|253689423|ref|YP_003018613.1| CMP/dCMP deaminase zinc-binding [Pectobacterium carotovorum subsp.
           carotovorum PC1]
 gi|251756001|gb|ACT14077.1| CMP/dCMP deaminase zinc-binding [Pectobacterium carotovorum subsp.
           carotovorum PC1]
          Length = 165

 Score =  225 bits (575), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 61/149 (40%), Positives = 78/149 (52%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M     +M  AL  AQ A    E+PVGAV VL+N+ I    NR     D TAHAEI+A+R
Sbjct: 1   MSNDEYWMRYALTLAQRAQDEGEVPVGAVLVLDNEAIGEGWNRPIGHHDPTAHAEIMALR 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
            G ++L    L +  LYVTLEPC MCA A+  +RI RL YGAS+ K G   +        
Sbjct: 61  QGGQVLQNYRLLDTTLYVTLEPCIMCAGAMIHSRIGRLVYGASDEKTGAAGSLVDILRHP 120

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H   I  GI  +     +  FF+ RR
Sbjct: 121 GMNHQIVIESGILAEECSATLSAFFRLRR 149


>gi|268593242|ref|ZP_06127463.1| tRNA-specific adenosine deaminase [Providencia rettgeri DSM 1131]
 gi|291311137|gb|EFE51590.1| tRNA-specific adenosine deaminase [Providencia rettgeri DSM 1131]
          Length = 160

 Score =  225 bits (575), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 56/149 (37%), Positives = 83/149 (55%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           ++    +M  A+E A  A    EIPVGAV V +N +++   NR+    + TAHAEI+A++
Sbjct: 4   IEIDEYWMQQAIELALKAQDLGEIPVGAVLVKDNHLVASGWNRSIIDHNPTAHAEIMALQ 63

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              + LS   L +  LYVTLEPC MCA A+  +RI R+ YGA + K G   +       A
Sbjct: 64  QAGQELSNYRLLDTTLYVTLEPCIMCAGAMIHSRISRVVYGAKDFKTGACGSYLDIMGQA 123

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  ++  G+ EQ+   ++  FFK RR
Sbjct: 124 GLNHYVDVTGGVLEQQCSSMLSAFFKLRR 152


>gi|301051758|ref|YP_003789969.1| putative cytidine/deoxycytidylate deaminase family protein
           [Bacillus anthracis CI]
 gi|300373927|gb|ADK02831.1| probable cytidine/deoxycytidylate deaminase family protein
           [Bacillus cereus biovar anthracis str. CI]
          Length = 166

 Score =  225 bits (575), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 61/151 (40%), Positives = 85/151 (56%), Gaps = 2/151 (1%)

Query: 1   MKKGN--VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           M++     FM  A+EEA+ A    E+P+GAV VLN ++IS A N     +   AHAE+LA
Sbjct: 1   MERDQDIYFMQLAIEEAKKAEAIQEVPIGAVIVLNGEVISAAHNLRETEQRSIAHAELLA 60

Query: 59  IRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
           I   C+ L    L +  LYVTLEPC MCA  I L+R+ R+ YGA +PKGG         T
Sbjct: 61  IDEACKKLGTWRLEDATLYVTLEPCPMCAGGIVLSRVNRVVYGAGDPKGGCAGTLMNLLT 120

Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
               +H  E+  G+ E+    ++ +FF+E R
Sbjct: 121 DERFNHQCEVVAGVLEEECGTLLTNFFRELR 151


>gi|329298459|ref|ZP_08255795.1| CMP/dCMP deaminase zinc-binding protein [Plautia stali symbiont]
          Length = 164

 Score =  225 bits (575), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 57/148 (38%), Positives = 80/148 (54%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           +    +M  ALE A+ A  + E+PVGAV V  +++I    NR     D TAHAEI+A+R 
Sbjct: 4   QTDEYWMRHALELARRAWEQGEVPVGAVLVQGDRVIGEGWNRPISQCDPTAHAEIMALRQ 63

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
           G +++    L +  LYVTLEPC MCA A+  +RI RL YGA + K G   +         
Sbjct: 64  GGKVIDNYRLLDTTLYVTLEPCVMCAGAMVHSRITRLVYGAKDEKTGAAGSLLDVIGHPG 123

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H  EI  G+       ++ DFF+ RR
Sbjct: 124 MNHQIEIAHGVLAGECATLLSDFFRMRR 151


>gi|283786173|ref|YP_003366038.1| tRNA-specific adenosine deaminase [Citrobacter rodentium ICC168]
 gi|282949627|emb|CBG89246.1| tRNA-specific adenosine deaminase [Citrobacter rodentium ICC168]
          Length = 180

 Score =  225 bits (575), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 57/147 (38%), Positives = 77/147 (52%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
               +M  AL  A+ A    E+PVGAV V NN++I    NR     D TAHAEI+A+R G
Sbjct: 20  SHEYWMRHALTLAKRAWDEREVPVGAVLVHNNRVIGEGWNRPIGRHDPTAHAEIMALRQG 79

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
             +L    L +  LYVTLEPC MCA A+  +RI R+ +GA + K G   +          
Sbjct: 80  GLVLQNYRLIDATLYVTLEPCVMCAGAMVHSRISRVVFGARDAKTGAAGSLIDVLHHPGM 139

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H  EI  G+       ++ DFF+ RR
Sbjct: 140 NHRVEITEGVLRDECATLLSDFFRMRR 166


>gi|16761480|ref|NP_457097.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp.
           enterica serovar Typhi str. CT18]
 gi|16765888|ref|NP_461503.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp.
           enterica serovar Typhimurium str. LT2]
 gi|29140823|ref|NP_804165.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp.
           enterica serovar Typhi str. Ty2]
 gi|62181133|ref|YP_217550.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. SC-B67]
 gi|224582890|ref|YP_002636688.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp.
           enterica serovar Paratyphi C strain RKS4594]
 gi|25303877|pir||AF0827 conserved hypothetical protein STY2814 [imported] - Salmonella
           enterica subsp. enterica serovar Typhi (strain CT18)
 gi|303325222|pdb|3OCQ|A Chain A, Crystal Structure Of Trna-Specific Adenosine Deaminase
           From Salmonella Enterica
 gi|16421115|gb|AAL21462.1| putative cytosine/adenosine deaminase [Salmonella enterica subsp.
           enterica serovar Typhimurium str. LT2]
 gi|16503780|emb|CAD02770.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Typhi]
 gi|29136448|gb|AAO68014.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
 gi|62128766|gb|AAX66469.1| putative Cytosine/adenosine deaminase [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. SC-B67]
 gi|224467417|gb|ACN45247.1| hypothetical protein SPC_1081 [Salmonella enterica subsp. enterica
           serovar Paratyphi C strain RKS4594]
 gi|261247763|emb|CBG25591.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Typhimurium str. D23580]
 gi|267994694|gb|ACY89579.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp.
           enterica serovar Typhimurium str. 14028S]
 gi|301159116|emb|CBW18630.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Typhimurium str. SL1344]
 gi|322715623|gb|EFZ07194.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. A50]
 gi|323130899|gb|ADX18329.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp.
           enterica serovar Typhimurium str. 4/74]
 gi|332989495|gb|AEF08478.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp.
           enterica serovar Typhimurium str. UK-1]
          Length = 183

 Score =  225 bits (575), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 56/147 (38%), Positives = 77/147 (52%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
               +M  AL  A+ A    E+PVGAV V N+++I    NR     D TAHAEI+A+R G
Sbjct: 18  DHEYWMRHALTLAKRAWDEREVPVGAVLVHNHRVIGEGWNRPIGRHDPTAHAEIMALRQG 77

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
             +L    L +  LYVTLEPC MCA A+  +RI R+ +GA + K G   +          
Sbjct: 78  GLVLQNYRLLDTTLYVTLEPCVMCAGAMVHSRIGRVVFGARDAKTGAAGSLIDVLHHPGM 137

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H  EI  G+       ++ DFF+ RR
Sbjct: 138 NHRVEIIEGVLRDECATLLSDFFRMRR 164


>gi|193068331|ref|ZP_03049294.1| tRNA-specific adenosine deaminase [Escherichia coli E110019]
 gi|260845189|ref|YP_003222967.1| tRNA-specific adenosine deaminase [Escherichia coli O103:H2 str.
           12009]
 gi|192958283|gb|EDV88723.1| tRNA-specific adenosine deaminase [Escherichia coli E110019]
 gi|257760336|dbj|BAI31833.1| tRNA-specific adenosine deaminase [Escherichia coli O103:H2 str.
           12009]
          Length = 167

 Score =  225 bits (574), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 57/147 (38%), Positives = 77/147 (52%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
               +M  AL  A+ A    E+PVGAV V NN++I    NR     D TAHAEI+A+R G
Sbjct: 7   SHEYWMRHALTLAKRAWDEREVPVGAVLVHNNRVIGEGWNRPIGRHDPTAHAEIMALRQG 66

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
             ++    L +  LYVTLEPC MCA A+  +RI R+ +GA + K G   +          
Sbjct: 67  GLVMQNYRLIDATLYVTLEPCVMCAGAMIHSRIGRVVFGAHDAKTGAAGSLMDVLHHPGM 126

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H  EI  GI       ++ DFF+ RR
Sbjct: 127 NHRVEITEGILADECAALLSDFFRMRR 153


>gi|238788214|ref|ZP_04632009.1| tRNA-specific adenosine deaminase [Yersinia frederiksenii ATCC
           33641]
 gi|238723801|gb|EEQ15446.1| tRNA-specific adenosine deaminase [Yersinia frederiksenii ATCC
           33641]
          Length = 191

 Score =  225 bits (574), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 57/147 (38%), Positives = 78/147 (53%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
               +M  AL  A  A    E+PVGA+ VL+N++I    NR     D TAHAEI+A+R G
Sbjct: 31  SDEYWMQRALALALRAQEEGEVPVGAILVLDNQVIGEGWNRPIRDNDPTAHAEIMALRQG 90

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
            R +    L +  LYVTLEPC MCA A+  +RIRRL YGA++ K G   +          
Sbjct: 91  GRAVQNYRLIDATLYVTLEPCVMCAGAMVHSRIRRLVYGANDLKTGAAGSLLDILRHPGM 150

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H  E+  G+        +  FF++RR
Sbjct: 151 NHQIEVCSGVLADACSHQLSAFFRQRR 177


>gi|157157409|ref|YP_001463881.1| tRNA-specific adenosine deaminase [Escherichia coli E24377A]
 gi|193064070|ref|ZP_03045155.1| tRNA-specific adenosine deaminase [Escherichia coli E22]
 gi|194427252|ref|ZP_03059802.1| tRNA-specific adenosine deaminase [Escherichia coli B171]
 gi|293446913|ref|ZP_06663335.1| yfhC [Escherichia coli B088]
 gi|309794388|ref|ZP_07688811.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Escherichia coli MS 145-7]
 gi|157079439|gb|ABV19147.1| tRNA-specific adenosine deaminase [Escherichia coli E24377A]
 gi|192929305|gb|EDV82914.1| tRNA-specific adenosine deaminase [Escherichia coli E22]
 gi|194414573|gb|EDX30845.1| tRNA-specific adenosine deaminase [Escherichia coli B171]
 gi|195183132|dbj|BAG66679.1| putative deaminase [Escherichia coli O111:H-]
 gi|291323743|gb|EFE63171.1| yfhC [Escherichia coli B088]
 gi|308121844|gb|EFO59106.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Escherichia coli MS 145-7]
 gi|323159237|gb|EFZ45226.1| tRNA-specific adenosine deaminase [Escherichia coli E128010]
          Length = 178

 Score =  225 bits (574), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 57/147 (38%), Positives = 77/147 (52%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
               +M  AL  A+ A    E+PVGAV V NN++I    NR     D TAHAEI+A+R G
Sbjct: 18  SHEYWMRHALTLAKRAWDEREVPVGAVLVHNNRVIGEGWNRPIGRHDPTAHAEIMALRQG 77

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
             ++    L +  LYVTLEPC MCA A+  +RI R+ +GA + K G   +          
Sbjct: 78  GLVMQNYRLIDATLYVTLEPCVMCAGAMIHSRIGRVVFGAHDAKTGAAGSLMDVLHHPGM 137

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H  EI  GI       ++ DFF+ RR
Sbjct: 138 NHRVEITEGILADECAALLSDFFRMRR 164


>gi|229826609|ref|ZP_04452678.1| hypothetical protein GCWU000182_01985 [Abiotrophia defectiva ATCC
           49176]
 gi|229789479|gb|EEP25593.1| hypothetical protein GCWU000182_01985 [Abiotrophia defectiva ATCC
           49176]
          Length = 167

 Score =  225 bits (574), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 54/149 (36%), Positives = 80/149 (53%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M     +M  A+++A+ A   +E+P+G V VL+ KII+R  NR        AHAE++AI+
Sbjct: 1   MTTDEKWMKEAIKQAEKAKKLDEVPIGCVIVLDGKIIARGYNRRNTDHTSLAHAEMMAIK 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
             C+ +    L +  LYVTLEPC MCA AI  +R+ R+  GA N K G   +        
Sbjct: 61  KACKKIRDWRLEKCTLYVTLEPCQMCAGAIVQSRVERVVIGAMNKKAGCAGSIFNLLEED 120

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  E+  G+ E    +++  FFKE R
Sbjct: 121 RFNHKAEVVRGVLENECSEMMSMFFKELR 149


>gi|170767485|ref|ZP_02901938.1| tRNA-specific adenosine deaminase [Escherichia albertii TW07627]
 gi|170123819|gb|EDS92750.1| tRNA-specific adenosine deaminase [Escherichia albertii TW07627]
          Length = 178

 Score =  225 bits (574), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 57/147 (38%), Positives = 77/147 (52%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
               +M  AL  A+ A    E+PVGAV V NN++I    NR     D TAHAEI+A+R G
Sbjct: 18  SHEYWMRHALTLAKRAWDEREVPVGAVLVHNNRVIGEGWNRPIGRHDPTAHAEIMALRQG 77

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
             ++    L +  LYVTLEPC MCA A+  +RI R+ +GA + K G   +          
Sbjct: 78  GLVMQNYRLIDATLYVTLEPCVMCAGAMIHSRIGRVVFGARDAKTGAAGSLMDVLHHPGM 137

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H  EI  GI       ++ DFF+ RR
Sbjct: 138 NHRVEITEGILADECAALLSDFFRMRR 164


>gi|16077086|ref|NP_387899.1| tRNA specific adenosine deaminase [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|221307827|ref|ZP_03589674.1| hypothetical protein Bsubs1_00090 [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|221312149|ref|ZP_03593954.1| hypothetical protein BsubsN3_00090 [Bacillus subtilis subsp.
           subtilis str. NCIB 3610]
 gi|221317082|ref|ZP_03598376.1| hypothetical protein BsubsJ_00090 [Bacillus subtilis subsp.
           subtilis str. JH642]
 gi|221321345|ref|ZP_03602639.1| hypothetical protein BsubsS_00090 [Bacillus subtilis subsp.
           subtilis str. SMY]
 gi|112703|sp|P21335|TADA_BACSU RecName: Full=tRNA-specific adenosine deaminase
 gi|40011|emb|CAA36389.1| unnamed protein product [Bacillus subtilis subsp. subtilis str.
           168]
 gi|467408|dbj|BAA05254.1| unknown [Bacillus subtilis]
 gi|2632285|emb|CAB11794.1| tRNA specific adenosine deaminase [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|227231|prf||1617102A 17kD protein
          Length = 161

 Score =  225 bits (574), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 54/148 (36%), Positives = 83/148 (56%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M +  ++M  A++EA+ A  + E+P+GAV V+N +II+RA N     +   AHAE+L I 
Sbjct: 1   MTQDELYMKEAIKEAKKAEEKGEVPIGAVLVINGEIIARAHNLRETEQRSIAHAEMLVID 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
             C+ L    L    LYVTLEPC MCA A+ L+R+ ++ +GA +PKGG            
Sbjct: 61  EACKALGTWRLEGATLYVTLEPCPMCAGAVVLSRVEKVVFGAFDPKGGCSGTLMNLLQEE 120

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKER 148
             +H  E+  G+ E+    ++  FF+E 
Sbjct: 121 RFNHQAEVVSGVLEEECGGMLSAFFREL 148


>gi|212710654|ref|ZP_03318782.1| hypothetical protein PROVALCAL_01720 [Providencia alcalifaciens DSM
           30120]
 gi|212686735|gb|EEB46263.1| hypothetical protein PROVALCAL_01720 [Providencia alcalifaciens DSM
           30120]
          Length = 170

 Score =  225 bits (574), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 54/146 (36%), Positives = 79/146 (54%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
              +M  ALE A+ A    EIPVGA+ V +N++++   N + E  D TAHAEI+ ++   
Sbjct: 7   DEYWMLQALELAKKAQNAGEIPVGALLVKDNQLVATGWNHSIENHDPTAHAEIVTLKQAG 66

Query: 64  RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123
             L    L +  LYVTLEPC MCA A+  +RI R+ YGA + K G   +     +    +
Sbjct: 67  TALQNYRLLDTTLYVTLEPCIMCAGAMIHSRIGRVVYGAKDFKTGACGSFINIMSQPGLN 126

Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149
           H  E+  G+ E     ++ +FFK RR
Sbjct: 127 HYVEVTSGVLEDACSSMLSEFFKMRR 152


>gi|288575144|ref|ZP_06393501.1| CMP/dCMP deaminase zinc-binding [Dethiosulfovibrio peptidovorans
           DSM 11002]
 gi|288570885|gb|EFC92442.1| CMP/dCMP deaminase zinc-binding [Dethiosulfovibrio peptidovorans
           DSM 11002]
          Length = 162

 Score =  225 bits (574), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 65/149 (43%), Positives = 83/149 (55%), Gaps = 1/149 (0%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           MK  N FM  A+EEA+ AA   +IPVGAV V  N +I R  N  R   D TAHAEI+AIR
Sbjct: 1   MKNKN-FMDLAIEEAKKAASEGDIPVGAVVVYKNDVIGRGRNLRRIDHDPTAHAEIVAIR 59

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              +      L   ++YVTLEPC MCA AI  +RI ++ YG ++PK G            
Sbjct: 60  QAAKARGSWNLSGCEIYVTLEPCPMCAGAIVQSRIAKVVYGCTDPKAGASGTLYDITRDT 119

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  E+  GI E R R +++DFF E R
Sbjct: 120 RLNHRCEVIKGIEEDRCRNMLRDFFSECR 148


>gi|149182698|ref|ZP_01861165.1| probable cytidine/deoxycytidylate deaminase family protein
           [Bacillus sp. SG-1]
 gi|148849608|gb|EDL63791.1| probable cytidine/deoxycytidylate deaminase family protein
           [Bacillus sp. SG-1]
          Length = 173

 Score =  225 bits (574), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 54/147 (36%), Positives = 82/147 (55%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
            K   FM  A++EA+ A  + E+P+GAV VL+ ++I+ A N     ++   HAE+LAI  
Sbjct: 3   TKQEYFMKLAIDEAKKAEDKAEVPIGAVVVLDGEVIASAHNLRETTQNAVTHAELLAIEE 62

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
            C+ L    L   +LYVTLEPC MC+ AI L+RI+ + YGA +PK G             
Sbjct: 63  ACKKLGTWRLENAELYVTLEPCPMCSGAIILSRIKTVVYGAPDPKAGCAGTLMNLLEDDR 122

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKER 148
            +H  E+ PG+ ++   Q++  FF+  
Sbjct: 123 FNHQCEVVPGVLQEECGQLLTHFFRGL 149


>gi|255279741|ref|ZP_05344296.1| tRNA-specific adenosine deaminase [Bryantella formatexigens DSM
           14469]
 gi|255269514|gb|EET62719.1| tRNA-specific adenosine deaminase [Bryantella formatexigens DSM
           14469]
          Length = 166

 Score =  225 bits (574), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 48/148 (32%), Positives = 78/148 (52%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           K    FM  A+ +A+ A   +E+P+G V V + KII+R  NR    K+  +HAE++AI+ 
Sbjct: 7   KIHEKFMREAIRQAKKAYALDEVPIGCVIVQDGKIIARGYNRRNTDKNTLSHAELIAIKK 66

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
             +      L    +Y+TLEPC MCA A+  AR+     G+ NPK G   +      +  
Sbjct: 67  AAKKTGDWRLEGCTMYITLEPCQMCAGAMVQARLTEAVIGSMNPKAGCAGSILNILEMPE 126

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H  ++  G+ E+   +++  FF+E R
Sbjct: 127 FNHQVQVTRGVLEEECSELLSRFFRELR 154


>gi|328956593|ref|YP_004373979.1| tRNA specific adenosine deaminase [Carnobacterium sp. 17-4]
 gi|328672917|gb|AEB28963.1| tRNA specific adenosine deaminase [Carnobacterium sp. 17-4]
          Length = 174

 Score =  225 bits (574), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 63/148 (42%), Positives = 86/148 (58%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           +    FM  A++EA  A  + E+P+GA+ VLN KII R  NR  E  D T HAE+LAI+ 
Sbjct: 5   EDKTYFMQEAIKEAHKAEEKLEVPIGAIVVLNGKIIGRGHNRREESNDATTHAEMLAIQE 64

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
             R L    L E  L+VTLEPC MC+ A+ L+R++ LYYGAS+PKGG         T   
Sbjct: 65  ANRYLGNWRLEEAQLFVTLEPCPMCSGAMILSRVKELYYGASDPKGGTAGTLMNLLTDER 124

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H  +I   + EQ   +++  FF+E R
Sbjct: 125 FNHQVQIESSLLEQECGELLSTFFRELR 152


>gi|56412555|ref|YP_149630.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. ATCC 9150]
 gi|197361490|ref|YP_002141126.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. AKU_12601]
 gi|56126812|gb|AAV76318.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|197092966|emb|CAR58397.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
 gi|320087069|emb|CBY96838.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp.
           enterica serovar Weltevreden str. 2007-60-3289-1]
          Length = 183

 Score =  225 bits (574), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 55/147 (37%), Positives = 77/147 (52%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
               +M  AL  A+ A    E+PVGAV V N+++I    NR     D TAHAEI+A+R G
Sbjct: 18  DHEYWMRHALTLAKRAWDEREVPVGAVLVHNHRVIGEGWNRPIGRHDPTAHAEIMALRQG 77

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
             +L    L +  LYVTLEPC MCA A+  +RI R+ +GA + K G   +          
Sbjct: 78  GLVLQNYRLLDTTLYVTLEPCVMCAGAMVHSRIGRVVFGARDAKTGAAGSLIDVLHHPGM 137

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H  +I  G+       ++ DFF+ RR
Sbjct: 138 NHRVDIIEGVLRDECATLLSDFFRMRR 164


>gi|109899420|ref|YP_662675.1| CMP/dCMP deaminase, zinc-binding [Pseudoalteromonas atlantica T6c]
 gi|109701701|gb|ABG41621.1| tRNA-adenosine deaminase [Pseudoalteromonas atlantica T6c]
          Length = 162

 Score =  225 bits (574), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 56/149 (37%), Positives = 82/149 (55%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +++  ++M  AL  A  AA   EIPVGAV V + KI+    N++  L D +AHAE+LAIR
Sbjct: 3   LEQDQLWMRHALSLASKAAQAGEIPVGAVLVKDQKIVGEGWNQSITLNDPSAHAEMLAIR 62

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
                +    L +  LYVTLEPCTMCA  +  +RI+RL +GA + K G   +        
Sbjct: 63  QAGINVKNYRLIDTTLYVTLEPCTMCAGLLVHSRIKRLVFGAYDAKTGAAGSIMDVLNDT 122

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  E+  G+  +   + I  FF++RR
Sbjct: 123 RLNHQVEVVGGVLGEECGETISAFFRQRR 151


>gi|188533151|ref|YP_001906948.1| tRNA-specific adenosine deaminase [Erwinia tasmaniensis Et1/99]
 gi|188028193|emb|CAO96051.1| tRNA-specific adenosine deaminase [Erwinia tasmaniensis Et1/99]
          Length = 186

 Score =  225 bits (574), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 52/148 (35%), Positives = 79/148 (53%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           +    +M  AL+ A+ A    E+PVGAV VL+ ++I    NR     D TAHAE++A+R 
Sbjct: 24  RNDEYWMRHALQLARRAWNEGEVPVGAVLVLDGQVIGEGWNRPIGHHDPTAHAEMMALRQ 83

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
           G +++    L +  LYVTLEPC MCA A+   R+ RL YGA + K G   +         
Sbjct: 84  GGKVIENYRLMDTTLYVTLEPCVMCAGAMVHGRVGRLVYGARDAKTGAAGSLLDVLGHPG 143

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H   +  G+       ++ +FF++RR
Sbjct: 144 MNHRVRVDCGVLADECAAMLSEFFRQRR 171


>gi|15612596|ref|NP_240899.1| Cu binding protein (Mn oxidation) [Bacillus halodurans C-125]
 gi|10172645|dbj|BAB03752.1| Cu binding protein (Mn oxidation) [Bacillus halodurans C-125]
          Length = 159

 Score =  224 bits (573), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 54/150 (36%), Positives = 79/150 (52%), Gaps = 1/150 (0%)

Query: 1   MKKGN-VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
           M+K +  +M  AL +A  A    E+P+GAV V +  ++++A N     +   AHAE+LAI
Sbjct: 1   MQKDDLYYMREALVQADEAERLGEVPIGAVIVKDGVVVAKAYNLREINQQAIAHAELLAI 60

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
              C+ L    L    LYVTLEPC MCA AI  +RI R+ YGA++PK G           
Sbjct: 61  EKACKALGTWRLTGCTLYVTLEPCPMCAGAIVQSRIERVVYGATDPKAGCAGTLMNLLNE 120

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
              +H   +  G+ E+   Q +  FF++ R
Sbjct: 121 ERFNHQTIVESGVLEEECSQRLTAFFRKLR 150


>gi|329768262|ref|ZP_08259763.1| hypothetical protein HMPREF0428_01460 [Gemella haemolysans M341]
 gi|328837461|gb|EGF87090.1| hypothetical protein HMPREF0428_01460 [Gemella haemolysans M341]
          Length = 155

 Score =  224 bits (573), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 55/149 (36%), Positives = 84/149 (56%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           MK  + +M  ALEEA+ A  + E+P+GAV V++ ++I++A N   E +    HAE+LAI+
Sbjct: 1   MKDHSYYMEMALEEARRAYAKGEVPIGAVLVVDGEVIAKAHNTREEHQQALNHAEMLAIK 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
             C       L    LY T+EPC MC+ AI  AR+  + YGAS+PK G   +        
Sbjct: 61  EACEKQGFWRLDNSYLYTTVEPCVMCSGAIVQARVENVIYGASDPKYGCCGSCIDLVGEN 120

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  E+  G+ E+    ++++FFKE R
Sbjct: 121 KFNHQAEVISGVLEEECSMLMKNFFKELR 149


>gi|218132702|ref|ZP_03461506.1| hypothetical protein BACPEC_00563 [Bacteroides pectinophilus ATCC
           43243]
 gi|217992428|gb|EEC58431.1| hypothetical protein BACPEC_00563 [Bacteroides pectinophilus ATCC
           43243]
          Length = 160

 Score =  224 bits (573), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 53/149 (35%), Positives = 76/149 (51%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +     +M  A+++A+ A    E P+G V V  NKII+R  NR    K    HAEI AIR
Sbjct: 6   LNDDEKYMKEAIKQARKAYKIGESPIGCVIVYQNKIIARGYNRRNIDKTTLGHAEITAIR 65

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              +++    L +  +YVTLEPC MCA AI  ARI R+  GA NPK G   +      + 
Sbjct: 66  KASKVIGDWRLEDCTIYVTLEPCQMCAGAIVQARIPRVVIGAMNPKAGCAGSVLNLLEIP 125

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  ++  G+       ++  FF+E R
Sbjct: 126 QFNHQCDVERGVLADECSGLMSSFFRELR 154


>gi|320176139|gb|EFW51206.1| tRNA-specific adenosine-34 deaminase [Shigella dysenteriae CDC
           74-1112]
          Length = 178

 Score =  224 bits (573), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 57/147 (38%), Positives = 78/147 (53%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
               +M  AL  A+ A    E+PVGAV V NN++I    NR     D TAHAEI+A+R G
Sbjct: 18  SHEYWMRHALTLAKRAWDEREVPVGAVLVHNNRVIGEGWNRPIGRHDPTAHAEIMALRQG 77

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
             ++    L +  LYVTLEPC MCA A++ +RI R+ +GA + K G   +          
Sbjct: 78  GLVMQNYRLIDATLYVTLEPCVMCAGAMTHSRIGRVVFGARDAKTGAAGSLMDVLHHPGM 137

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H  EI  GI       ++ DFF+ RR
Sbjct: 138 NHRVEITEGILADECAALLSDFFRMRR 164


>gi|304405747|ref|ZP_07387405.1| CMP/dCMP deaminase zinc-binding [Paenibacillus curdlanolyticus YK9]
 gi|304344990|gb|EFM10826.1| CMP/dCMP deaminase zinc-binding [Paenibacillus curdlanolyticus YK9]
          Length = 148

 Score =  224 bits (573), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 53/142 (37%), Positives = 77/142 (54%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M+ A+EEA+ A    E+P+GAV V N ++I R  N      D TAHAEI+AIR   + + 
Sbjct: 1   MAEAIEEARKAEAIGEVPIGAVIVRNGEVIGRGYNLRETDHDATAHAEIIAIREASKHIE 60

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
              L +  LYVTLEPC MCA AI  +R++R+ YG  +PK G              +H  E
Sbjct: 61  AWRLLDSTLYVTLEPCPMCAGAIVQSRVKRVVYGTHDPKAGCAGTLMNLLQEPRFNHETE 120

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
           +  G+ ++    ++  FF+  R
Sbjct: 121 LTSGVMQEECASLLTTFFRRLR 142


>gi|87310742|ref|ZP_01092869.1| cytosine deaminase [Blastopirellula marina DSM 3645]
 gi|87286499|gb|EAQ78406.1| cytosine deaminase [Blastopirellula marina DSM 3645]
          Length = 166

 Score =  224 bits (573), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 60/146 (41%), Positives = 85/146 (58%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
             +FM  ALE A+ AA   E+PVGA+ V NN++I+ A N+   L D TAHAE++AI    
Sbjct: 16  HQIFMYQALELAEQAAREKEVPVGAIIVHNNRVIAAAHNQRETLHDPTAHAEMIAITQAA 75

Query: 64  RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123
             L    L +  LYVTLEPC MCA AI  ARI  + +GA +PK G + +     + +  +
Sbjct: 76  ESLQNWRLADCTLYVTLEPCPMCAGAILQARIPTVVFGAIDPKAGAVTSLYTLLSDSRLN 135

Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149
           H  E+ PGI   +   ++ +FF+ RR
Sbjct: 136 HRCEVVPGILAPQCGDVLTEFFRARR 161


>gi|284049062|ref|YP_003399401.1| CMP/dCMP deaminase zinc-binding protein [Acidaminococcus fermentans
           DSM 20731]
 gi|283953283|gb|ADB48086.1| CMP/dCMP deaminase zinc-binding protein [Acidaminococcus fermentans
           DSM 20731]
          Length = 159

 Score =  224 bits (573), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 65/148 (43%), Positives = 88/148 (59%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           ++   FM  ALEEA+ AA   EIPVGAV V + ++++R  NR  + +D TAHAE L IR 
Sbjct: 12  QRDVHFMEMALEEARQAAREGEIPVGAVLVRDGQVLARDHNRREQDRDATAHAEFLVIRQ 71

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
            CR+L +  L +  LYVTLEPC MCA AI  AR+ RL YGA +   G   +        +
Sbjct: 72  ACRLLRRWRLSDTTLYVTLEPCPMCAGAIWNARVGRLVYGAWDSAAGSCGSQFNLPAHPS 131

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +   E+  G+ E+  R+I+QDF K RR
Sbjct: 132 LNFRTEVTAGVLEEECRKILQDFLKARR 159


>gi|154684537|ref|YP_001419698.1| YaaJ [Bacillus amyloliquefaciens FZB42]
 gi|154350388|gb|ABS72467.1| YaaJ [Bacillus amyloliquefaciens FZB42]
          Length = 160

 Score =  224 bits (573), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 53/147 (36%), Positives = 84/147 (57%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
               +M  A++EA+ A  + E+P+GAV VL+++I++RA N     +   AHAE+LAI   
Sbjct: 2   NDEYYMREAIKEAKKAEAKGEVPIGAVLVLHDEIVARAHNLRETEQRSLAHAEMLAIDEA 61

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
           CR L    L +  LYVTLEPC MCA A+ L+R+ ++ +GA +PKGG              
Sbjct: 62  CRKLGTWRLEDAVLYVTLEPCPMCAGAVVLSRVDKVVFGAFDPKGGCTGTLMNLLQEERF 121

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H  E+  G+  +   +++  FF++ R
Sbjct: 122 NHQAEVVSGVLGEECGEMLSAFFRKLR 148


>gi|118580679|ref|YP_901929.1| CMP/dCMP deaminase [Pelobacter propionicus DSM 2379]
 gi|118503389|gb|ABK99871.1| tRNA-adenosine deaminase [Pelobacter propionicus DSM 2379]
          Length = 181

 Score =  224 bits (573), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 55/141 (39%), Positives = 80/141 (56%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           +    +M  A+ EA  A  R+E+P+G V V +N+II+R  N     +D +AHAE++AIR 
Sbjct: 13  RSHEYWMQRAIAEAGKARSRDEVPIGCVIVRDNRIIARGHNLRESSQDPSAHAEMIAIRK 72

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
             R LS   L +  LYVTLEPCTMC  AI L+RI R+ +G  +PKGG   +         
Sbjct: 73  AARKLSSWRLLDTTLYVTLEPCTMCMGAIILSRIPRVVFGCLDPKGGAAGSLYDLSNDPR 132

Query: 122 CHHSPEIYPGISEQRSRQIIQ 142
            +H  E+ PG+ E+    ++ 
Sbjct: 133 LNHRVELLPGVLERDCSSLLS 153


>gi|171463305|ref|YP_001797418.1| CMP/dCMP deaminase zinc-binding [Polynucleobacter necessarius
           subsp. necessarius STIR1]
 gi|171192843|gb|ACB43804.1| CMP/dCMP deaminase zinc-binding [Polynucleobacter necessarius
           subsp. necessarius STIR1]
          Length = 152

 Score =  224 bits (573), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 56/146 (38%), Positives = 83/146 (56%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
              +M  A+E+AQ AA   E+PVGAV V + ++I++A N+     D +AHAE+LA+R   
Sbjct: 7   DQQYMRMAIEQAQLAAQAGEVPVGAVLVKDGQVIAKAFNKPIANHDPSAHAEMLALREAA 66

Query: 64  RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123
                  +P   LYVTLEPC MC+ A+  ARI R+ +GA +PK G   +    +     +
Sbjct: 67  LAQENYRIPGSTLYVTLEPCAMCSGAMLHARIDRVVFGAPDPKTGAAGSVLDLFASKQIN 126

Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149
           H   +  GI  +   Q+++DFFK RR
Sbjct: 127 HQTSVEGGIMSEECGQLLRDFFKRRR 152


>gi|329666788|gb|AEB92736.1| cytosine/adenosine deaminase [Lactobacillus johnsonii DPC 6026]
          Length = 160

 Score =  224 bits (572), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 54/149 (36%), Positives = 89/149 (59%), Gaps = 1/149 (0%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIR 60
           ++   +M  A E+A+ A  + E+P+GAV V  +  +I    NR    +D T HAE++AIR
Sbjct: 5   EQKEKYMHLAFEQAKKAEEQGEVPIGAVVVDKDGNVIGEGYNRRELDEDATQHAEMIAIR 64

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
             C+ L+   L +  L++TLEPC MC+ AI  +R+  +YYGA +PK G   +    + + 
Sbjct: 65  QACKKLNSWRLVDCSLFITLEPCPMCSGAIINSRLAEVYYGAFDPKAGAAGSVIDLFKVE 124

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H P+IY G+   ++ Q+++DFF+E R
Sbjct: 125 KFNHHPKIYGGLFRDQASQMLKDFFREIR 153


>gi|313905719|ref|ZP_07839079.1| Cof-like hydrolase [Eubacterium cellulosolvens 6]
 gi|313469426|gb|EFR64768.1| Cof-like hydrolase [Eubacterium cellulosolvens 6]
          Length = 450

 Score =  224 bits (572), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 50/145 (34%), Positives = 79/145 (54%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
             +M  A+ EA+ AA   E+P+GAV V + +II+R  NR     +  +HAE+ A+R   +
Sbjct: 299 EKYMRAAIREAKRAASIGEVPIGAVIVRDGEIIARGYNRRNTDHNTLSHAELNALRKASK 358

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
            L    L    +YVT+EPC MCA A+  +RI ++  G  +PK G   +      +   +H
Sbjct: 359 KLGDWRLEGCTMYVTMEPCQMCAGALVQSRIDKVVIGCMSPKTGCAGSVMNLMQVPVFNH 418

Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149
           S E+  GI E+   +I+ +FF+  R
Sbjct: 419 SVELEKGILEEECSRILTEFFENLR 443


>gi|262281785|ref|ZP_06059554.1| cytidine/deoxycytidylate deaminase [Streptococcus sp. 2_1_36FAA]
 gi|262262239|gb|EEY80936.1| cytidine/deoxycytidylate deaminase [Streptococcus sp. 2_1_36FAA]
          Length = 162

 Score =  224 bits (572), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 59/148 (39%), Positives = 84/148 (56%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           ++   FM  AL+EA+ A   +EIP+G V V + +II R  N   EL+    HAEI+AI  
Sbjct: 13  EEKEYFMLEALKEARIALENDEIPIGCVIVRDGQIIGRGHNAREELQRAVMHAEIMAIEE 72

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
             +  +   L +  L+VT+EPC MC+ AI LARI  + YGASN K G   +     T   
Sbjct: 73  ANQHENSWRLLDTTLFVTIEPCVMCSGAIGLARIPHVVYGASNQKFGAAGSLYDILTDER 132

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H  E+  G+ ++   QI+QDFF+ RR
Sbjct: 133 LNHRVEVETGVLQEECAQIMQDFFRNRR 160


>gi|183599769|ref|ZP_02961262.1| hypothetical protein PROSTU_03276 [Providencia stuartii ATCC 25827]
 gi|188022032|gb|EDU60072.1| hypothetical protein PROSTU_03276 [Providencia stuartii ATCC 25827]
          Length = 178

 Score =  224 bits (572), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 60/148 (40%), Positives = 85/148 (57%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           +    +M  ALE A+NA    EIPVGA+ V +N++I+   NR+ E  D TAHAEI+ ++ 
Sbjct: 5   EVDEFWMKRALELAKNAQDAGEIPVGALLVKDNQLIASGWNRSIESHDPTAHAEIMVLQQ 64

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
           G R LS   L +  LYVTLEPC MCA A+  +RI RL YGA + K G   +         
Sbjct: 65  GGRALSNYRLLDTTLYVTLEPCIMCAGALVHSRIGRLVYGARDFKTGACGSFINILERPG 124

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H  ++  G+ E+    ++ +FFK RR
Sbjct: 125 LNHYVDVKGGVLEETCSAMLSNFFKMRR 152


>gi|291482388|dbj|BAI83463.1| hypothetical protein BSNT_00036 [Bacillus subtilis subsp. natto
           BEST195]
          Length = 161

 Score =  224 bits (572), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 54/148 (36%), Positives = 84/148 (56%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M +  ++M  A++EA+ A  + E+P+GAV V+N++II+RA N     +   AHAE+L I 
Sbjct: 1   MTQDELYMKEAIKEAKKAEEKGEVPIGAVLVVNDEIIARAHNLRETEQRSIAHAEMLVID 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
             C+ L    L    LYVTLEPC MCA A+ L+R+ ++ +GA +PKGG            
Sbjct: 61  EACKALGTWRLEGATLYVTLEPCPMCAGAVVLSRVEKVVFGAFDPKGGCSGTLMNLLQEE 120

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKER 148
             +H  E+  G+ E+    ++  FF+E 
Sbjct: 121 RFNHQAEVVSGVLEEECGGMLSAFFREL 148


>gi|322613338|gb|EFY10280.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 315996572]
 gi|322633869|gb|EFY30608.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 515920-1]
 gi|322635475|gb|EFY32186.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 515920-2]
 gi|322654860|gb|EFY51177.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp.
           enterica serovar Montevideo str. CASC_09SCPH15965]
 gi|322661716|gb|EFY57934.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 81038-01]
 gi|322669697|gb|EFY65843.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp.
           enterica serovar Montevideo str. MD_MDA09249507]
 gi|322673296|gb|EFY69401.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 414877]
 gi|322674915|gb|EFY71002.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 366867]
 gi|322682938|gb|EFY78956.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 413180]
 gi|322685599|gb|EFY81594.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 446600]
 gi|323191973|gb|EFZ77211.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 609458-1]
 gi|323211560|gb|EFZ96398.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 556152]
 gi|323215992|gb|EGA00724.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB101509-0077]
 gi|323225619|gb|EGA09846.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB110209-0055]
 gi|323229337|gb|EGA13461.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB111609-0052]
 gi|323235348|gb|EGA19432.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 2009083312]
 gi|323237466|gb|EGA21529.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 2009085258]
 gi|323254025|gb|EGA37846.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008282]
 gi|323269662|gb|EGA53114.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008287]
          Length = 183

 Score =  224 bits (572), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 56/147 (38%), Positives = 77/147 (52%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
               +M  AL  A+ A    E+PVGAV V N+++I    NR     D TAHAEI+A+R G
Sbjct: 18  DHEYWMRHALTLAKRAWDEREVPVGAVLVHNHRVIGEGWNRPIGRHDPTAHAEIMALRQG 77

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
             +L    L +  LYVTLEPC MCA AI  +RI R+ +GA + K G   +          
Sbjct: 78  GLVLQNYRLLDTTLYVTLEPCVMCAGAIVHSRIGRVVFGARDAKTGAAGSLIDVLHHPGM 137

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H  +I  G+       ++ DFF+ RR
Sbjct: 138 NHRVDIIEGVLRDECATLLSDFFRMRR 164


>gi|83588899|ref|YP_428908.1| tRNA-adenosine deaminase [Moorella thermoacetica ATCC 39073]
 gi|83571813|gb|ABC18365.1| tRNA-adenosine deaminase [Moorella thermoacetica ATCC 39073]
          Length = 150

 Score =  224 bits (572), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 64/147 (43%), Positives = 88/147 (59%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
             + +M  AL+EA+ A    E+P+GAV V   +II+RAGNR   L D TAHAEI+A+R  
Sbjct: 2   DHHFYMGEALDEARKAFDLGEVPIGAVIVAGGEIIARAGNRRETLADPTAHAEIIALRAA 61

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
            R+     L    LYVTLEPC MCA A+  ARIR+L YGA + + G +++          
Sbjct: 62  ARVRGDWRLTGATLYVTLEPCPMCAGALVQARIRQLVYGAPDLRSGAVDSVVNLVENPHF 121

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
            H  E+ PGI E+  R++I+ FF+ RR
Sbjct: 122 DHQVEVIPGIREEECRELIKKFFQMRR 148


>gi|323487362|ref|ZP_08092661.1| tRNA-specific adenosine deaminase [Clostridium symbiosum WAL-14163]
 gi|323399323|gb|EGA91722.1| tRNA-specific adenosine deaminase [Clostridium symbiosum WAL-14163]
          Length = 184

 Score =  224 bits (572), Expect = 4e-57,   Method: Composition-based stats.
 Identities = 54/149 (36%), Positives = 77/149 (51%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M     +M  A+ EA+ A    E+P+G V V   KII R  NR    K+V +HAEI AI+
Sbjct: 30  MTDDEKYMRAAIREAKKAYALGEVPIGCVIVFEGKIIGRGYNRRIADKNVLSHAEINAIK 89

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
             C+ +    L    +Y+TLEPC MCA AI  ARI ++  G+ NPK G   +        
Sbjct: 90  KACKKMGDWRLEGCTMYITLEPCPMCAGAIVQARIPKVLIGSMNPKAGCAGSVMNLLDEK 149

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  E   GI  +    ++++FF+E R
Sbjct: 150 GFNHQVETEIGILGEECSGMLKEFFRELR 178


>gi|156932900|ref|YP_001436816.1| hypothetical protein ESA_00702 [Cronobacter sakazakii ATCC BAA-894]
 gi|156531154|gb|ABU75980.1| hypothetical protein ESA_00702 [Cronobacter sakazakii ATCC BAA-894]
          Length = 213

 Score =  224 bits (572), Expect = 4e-57,   Method: Composition-based stats.
 Identities = 56/147 (38%), Positives = 76/147 (51%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
               +M  AL  AQ A    E+PVGAV V NN++I    NR     D TAHAEI+A+R G
Sbjct: 47  THEYWMRHALTLAQRAWDEGEVPVGAVLVHNNQVIGEGWNRPIGRHDPTAHAEIMALRQG 106

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
             +L    L +  LYVTLEPC MCA A+   RI  L +GA + K G + +          
Sbjct: 107 GLVLQNYRLLDTTLYVTLEPCVMCAGAMVHGRIGTLVFGARDAKTGAVGSLMDITGHPGM 166

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H  ++  GI       ++  FF++RR
Sbjct: 167 NHQVQVIEGILATECSAMLSAFFRQRR 193


>gi|170019158|ref|YP_001724112.1| tRNA-specific adenosine deaminase [Escherichia coli ATCC 8739]
 gi|169754086|gb|ACA76785.1| CMP/dCMP deaminase zinc-binding [Escherichia coli ATCC 8739]
          Length = 167

 Score =  224 bits (572), Expect = 4e-57,   Method: Composition-based stats.
 Identities = 57/147 (38%), Positives = 78/147 (53%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
               +M  AL  A+ A    E+PVGAV V NN++I    NR     D TAHAEI+A+R G
Sbjct: 7   SHEYWMRHALTLAKRAWDEREVPVGAVLVHNNRVIGEGWNRPIGRHDPTAHAEIMALRQG 66

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
             ++    L +  LYVTLEPC MCA A+  +RI R+ +GA + K G   +       +  
Sbjct: 67  GLVMQNYRLIDATLYVTLEPCVMCAGAMIHSRIGRVVFGARDAKTGAAGSLMDVLHHSGM 126

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H  EI  GI       ++ DFF+ RR
Sbjct: 127 NHRVEITEGILADECAALLSDFFRMRR 153


>gi|149176635|ref|ZP_01855247.1| cytosine deaminase [Planctomyces maris DSM 8797]
 gi|148844514|gb|EDL58865.1| cytosine deaminase [Planctomyces maris DSM 8797]
          Length = 171

 Score =  224 bits (572), Expect = 4e-57,   Method: Composition-based stats.
 Identities = 55/146 (37%), Positives = 82/146 (56%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
              +M  A +EA+ A   +E+PVGAV V  ++II+ A N+   L D TAHAE++AI    
Sbjct: 21  HTRWMRYAYDEARAAFEEDEVPVGAVIVYQDRIIAAAHNQREMLSDPTAHAEMIAITQAA 80

Query: 64  RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123
             L    L +  LYVTLEPC MCA AI  +R+  + YG  + K G   +  Q  + A  +
Sbjct: 81  ESLGSWRLSDCVLYVTLEPCPMCAGAIVQSRLPLVIYGTRDEKAGACHSLFQITSDARLN 140

Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149
           H   +  G+ ++  R I+Q+FF+ +R
Sbjct: 141 HQSTVISGVMQEECRGILQEFFRRKR 166


>gi|160936895|ref|ZP_02084259.1| hypothetical protein CLOBOL_01784 [Clostridium bolteae ATCC
           BAA-613]
 gi|158440085|gb|EDP17832.1| hypothetical protein CLOBOL_01784 [Clostridium bolteae ATCC
           BAA-613]
          Length = 244

 Score =  224 bits (572), Expect = 4e-57,   Method: Composition-based stats.
 Identities = 58/148 (39%), Positives = 83/148 (56%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           +K   FM  AL +AQ AA   ++P+G V V  +KII+R  NR    K V +HAEI++I+ 
Sbjct: 93  QKDEGFMREALRQAQKAAAIGDVPIGCVIVRGDKIIARGYNRRNADKSVLSHAEIISIKK 152

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
            C+ +    L +  +YVTLEPC MCA AI  ARI R+  G  NPK G   +      +  
Sbjct: 153 ACKKIGDWRLEDCTMYVTLEPCPMCAGAIVQARIPRIAVGCMNPKAGCAGSVLDMLHVPG 212

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H  E+  G+ EQ   +++ DFF+  R
Sbjct: 213 FNHQAEVTEGVLEQECSKLMSDFFQSLR 240


>gi|37527198|ref|NP_930542.1| tRNA-specific adenosine deaminase [Photorhabdus luminescens subsp.
           laumondii TTO1]
 gi|36786632|emb|CAE15694.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii
           TTO1]
          Length = 173

 Score =  224 bits (571), Expect = 4e-57,   Method: Composition-based stats.
 Identities = 60/147 (40%), Positives = 82/147 (55%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
               +M  A+E A  A  + EIPVGA+ V +NKIIS   N++    D TAHAEI+ +R G
Sbjct: 6   SDEYWMQQAIERAIKAWEQGEIPVGAILVADNKIISEGWNQSIIAHDPTAHAEIIVLRKG 65

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
              L    L    LYVTLEPCTMCA A+  +RI+RL YGAS+ K G + +          
Sbjct: 66  GERLRNYRLINTTLYVTLEPCTMCAGAMIHSRIQRLVYGASDMKTGAVGSLVDILRHPGM 125

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H  +I  G+  +    ++  FFK+RR
Sbjct: 126 NHQIDITSGVLAEECSTMLSAFFKQRR 152


>gi|168757783|ref|ZP_02782790.1| tRNA-specific adenosine deaminase [Escherichia coli O157:H7 str.
           EC4401]
 gi|168768660|ref|ZP_02793667.1| tRNA-specific adenosine deaminase [Escherichia coli O157:H7 str.
           EC4486]
 gi|188024727|ref|ZP_02773396.2| tRNA-specific adenosine deaminase [Escherichia coli O157:H7 str.
           EC4113]
 gi|189403941|ref|ZP_02786184.2| tRNA-specific adenosine deaminase [Escherichia coli O157:H7 str.
           EC4501]
 gi|195936706|ref|ZP_03082088.1| tRNA-specific adenosine deaminase [Escherichia coli O157:H7 str.
           EC4024]
 gi|208806459|ref|ZP_03248796.1| tRNA-specific adenosine deaminase [Escherichia coli O157:H7 str.
           EC4206]
 gi|208812941|ref|ZP_03254270.1| tRNA-specific adenosine deaminase [Escherichia coli O157:H7 str.
           EC4045]
 gi|208820370|ref|ZP_03260690.1| tRNA-specific adenosine deaminase [Escherichia coli O157:H7 str.
           EC4042]
 gi|209400171|ref|YP_002272033.1| tRNA-specific adenosine deaminase [Escherichia coli O157:H7 str.
           EC4115]
 gi|215487903|ref|YP_002330334.1| tRNA-specific adenosine deaminase [Escherichia coli O127:H6 str.
           E2348/69]
 gi|217327122|ref|ZP_03443205.1| tRNA-specific adenosine deaminase [Escherichia coli O157:H7 str.
           TW14588]
 gi|254794508|ref|YP_003079345.1| tRNA-specific adenosine deaminase [Escherichia coli O157:H7 str.
           TW14359]
 gi|261223005|ref|ZP_05937286.1| tRNA-specific adenosine deaminase [Escherichia coli O157:H7 str.
           FRIK2000]
 gi|261259444|ref|ZP_05951977.1| tRNA-specific adenosine deaminase [Escherichia coli O157:H7 str.
           FRIK966]
 gi|306814377|ref|ZP_07448539.1| tRNA-specific adenosine deaminase [Escherichia coli NC101]
 gi|150421686|sp|Q8XA44|TADA_ECO57 RecName: Full=tRNA-specific adenosine deaminase
 gi|150421687|sp|Q8FF24|TADA_ECOL6 RecName: Full=tRNA-specific adenosine deaminase
 gi|188017152|gb|EDU55274.1| tRNA-specific adenosine deaminase [Escherichia coli O157:H7 str.
           EC4113]
 gi|189355294|gb|EDU73713.1| tRNA-specific adenosine deaminase [Escherichia coli O157:H7 str.
           EC4401]
 gi|189362211|gb|EDU80630.1| tRNA-specific adenosine deaminase [Escherichia coli O157:H7 str.
           EC4486]
 gi|189368357|gb|EDU86773.1| tRNA-specific adenosine deaminase [Escherichia coli O157:H7 str.
           EC4501]
 gi|208726260|gb|EDZ75861.1| tRNA-specific adenosine deaminase [Escherichia coli O157:H7 str.
           EC4206]
 gi|208734218|gb|EDZ82905.1| tRNA-specific adenosine deaminase [Escherichia coli O157:H7 str.
           EC4045]
 gi|208740493|gb|EDZ88175.1| tRNA-specific adenosine deaminase [Escherichia coli O157:H7 str.
           EC4042]
 gi|209161571|gb|ACI39004.1| tRNA-specific adenosine deaminase [Escherichia coli O157:H7 str.
           EC4115]
 gi|215265975|emb|CAS10384.1| tRNA-specific adenosine deaminase [Escherichia coli O127:H6 str.
           E2348/69]
 gi|217319489|gb|EEC27914.1| tRNA-specific adenosine deaminase [Escherichia coli O157:H7 str.
           TW14588]
 gi|254593908|gb|ACT73269.1| tRNA-specific adenosine deaminase [Escherichia coli O157:H7 str.
           TW14359]
 gi|305851771|gb|EFM52223.1| tRNA-specific adenosine deaminase [Escherichia coli NC101]
 gi|312947130|gb|ADR27957.1| tRNA-specific adenosine deaminase [Escherichia coli O83:H1 str. NRG
           857C]
 gi|320180559|gb|EFW55490.1| tRNA-specific adenosine-34 deaminase [Shigella boydii ATCC 9905]
 gi|320188900|gb|EFW63559.1| tRNA-specific adenosine-34 deaminase [Escherichia coli O157:H7 str.
           EC1212]
 gi|320640908|gb|EFX10396.1| tRNA-specific adenosine deaminase [Escherichia coli O157:H7 str.
           G5101]
 gi|320646350|gb|EFX15277.1| tRNA-specific adenosine deaminase [Escherichia coli O157:H- str.
           493-89]
 gi|320651530|gb|EFX19917.1| tRNA-specific adenosine deaminase [Escherichia coli O157:H- str. H
           2687]
 gi|320657241|gb|EFX25050.1| tRNA-specific adenosine deaminase [Escherichia coli O55:H7 str.
           3256-97 TW 07815]
 gi|320662847|gb|EFX30179.1| tRNA-specific adenosine deaminase [Escherichia coli O55:H7 str.
           USDA 5905]
 gi|320667651|gb|EFX34566.1| tRNA-specific adenosine deaminase [Escherichia coli O157:H7 str.
           LSU-61]
 gi|323955795|gb|EGB51553.1| cytidine and deoxycytidylate deaminase zinc-binding protein
           [Escherichia coli H263]
 gi|323968007|gb|EGB63419.1| cytidine and deoxycytidylate deaminase zinc-binding protein
           [Escherichia coli M863]
 gi|326340365|gb|EGD64169.1| tRNA-specific adenosine-34 deaminase [Escherichia coli O157:H7 str.
           1125]
 gi|332088011|gb|EGI93136.1| tRNA-specific adenosine deaminase [Shigella boydii 5216-82]
 gi|332089781|gb|EGI94882.1| tRNA-specific adenosine deaminase [Shigella dysenteriae 155-74]
          Length = 167

 Score =  224 bits (571), Expect = 4e-57,   Method: Composition-based stats.
 Identities = 56/147 (38%), Positives = 77/147 (52%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
               +M  A+  A+ A    E+PVGAV V NN++I    NR     D TAHAEI+A+R G
Sbjct: 7   SHEYWMRHAMTLAKRAWDEREVPVGAVLVHNNRVIGEGWNRPIGRHDPTAHAEIMALRQG 66

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
             ++    L +  LYVTLEPC MCA A+  +RI R+ +GA + K G   +          
Sbjct: 67  GLVMQNYRLIDATLYVTLEPCVMCAGAMIHSRIGRVVFGARDAKTGAAGSLMDVLHHPGM 126

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H  EI  GI       ++ DFF+ RR
Sbjct: 127 NHRVEITEGILADECAALLSDFFRMRR 153


>gi|15803084|ref|NP_289115.1| tRNA-specific adenosine deaminase [Escherichia coli O157:H7 EDL933]
 gi|15832679|ref|NP_311452.1| tRNA-specific adenosine deaminase [Escherichia coli O157:H7 str.
           Sakai]
 gi|82777934|ref|YP_404283.1| tRNA-specific adenosine deaminase [Shigella dysenteriae Sd197]
 gi|91211884|ref|YP_541870.1| tRNA-specific adenosine deaminase [Escherichia coli UTI89]
 gi|110642721|ref|YP_670451.1| tRNA-specific adenosine deaminase [Escherichia coli 536]
 gi|117624781|ref|YP_853694.1| tRNA-specific adenosine deaminase [Escherichia coli APEC O1]
 gi|187775816|ref|ZP_02798525.2| tRNA-specific adenosine deaminase [Escherichia coli O157:H7 str.
           EC4196]
 gi|189009982|ref|ZP_02803540.2| tRNA-specific adenosine deaminase [Escherichia coli O157:H7 str.
           EC4076]
 gi|189405037|ref|ZP_02812923.2| tRNA-specific adenosine deaminase [Escherichia coli O157:H7 str.
           EC869]
 gi|189405736|ref|ZP_02823945.2| tRNA-specific adenosine deaminase [Escherichia coli O157:H7 str.
           EC508]
 gi|191172647|ref|ZP_03034186.1| tRNA-specific adenosine deaminase [Escherichia coli F11]
 gi|194432153|ref|ZP_03064442.1| tRNA-specific adenosine deaminase [Shigella dysenteriae 1012]
 gi|218559479|ref|YP_002392392.1| tRNA-specific adenosine deaminase [Escherichia coli S88]
 gi|218690674|ref|YP_002398886.1| tRNA-specific adenosine deaminase [Escherichia coli ED1a]
 gi|237705067|ref|ZP_04535548.1| tRNA-specific adenosine deaminase [Escherichia sp. 3_2_53FAA]
 gi|291283784|ref|YP_003500602.1| tRNA-specific adenosine deaminase [Escherichia coli O55:H7 str.
           CB9615]
 gi|293415828|ref|ZP_06658471.1| tRNA-specific adenosine deaminase [Escherichia coli B185]
 gi|300935691|ref|ZP_07150661.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Escherichia coli MS 21-1]
 gi|300974171|ref|ZP_07172489.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Escherichia coli MS 200-1]
 gi|309784689|ref|ZP_07679322.1| tRNA-specific adenosine deaminase [Shigella dysenteriae 1617]
 gi|331648252|ref|ZP_08349342.1| tRNA-specific adenosine deaminase [Escherichia coli M605]
 gi|331653994|ref|ZP_08354995.1| tRNA-specific adenosine deaminase [Escherichia coli M718]
 gi|331658703|ref|ZP_08359647.1| tRNA-specific adenosine deaminase [Escherichia coli TA206]
 gi|12516972|gb|AAG57673.1|AE005486_4 putative deaminase [Escherichia coli O157:H7 str. EDL933]
 gi|13362896|dbj|BAB36848.1| putative deaminase [Escherichia coli O157:H7 str. Sakai]
 gi|81242082|gb|ABB62792.1| putative deaminase [Shigella dysenteriae Sd197]
 gi|91073458|gb|ABE08339.1| putative deaminase [Escherichia coli UTI89]
 gi|110344313|gb|ABG70550.1| hypothetical protein YfhC [Escherichia coli 536]
 gi|115513905|gb|ABJ01980.1| tRNA-specific adenosine deaminase [Escherichia coli APEC O1]
 gi|187770595|gb|EDU34439.1| tRNA-specific adenosine deaminase [Escherichia coli O157:H7 str.
           EC4196]
 gi|189003519|gb|EDU72505.1| tRNA-specific adenosine deaminase [Escherichia coli O157:H7 str.
           EC4076]
 gi|189372298|gb|EDU90714.1| tRNA-specific adenosine deaminase [Escherichia coli O157:H7 str.
           EC869]
 gi|189378592|gb|EDU97008.1| tRNA-specific adenosine deaminase [Escherichia coli O157:H7 str.
           EC508]
 gi|190907120|gb|EDV66720.1| tRNA-specific adenosine deaminase [Escherichia coli F11]
 gi|194419682|gb|EDX35762.1| tRNA-specific adenosine deaminase [Shigella dysenteriae 1012]
 gi|209762958|gb|ACI79791.1| putative deaminase [Escherichia coli]
 gi|209762960|gb|ACI79792.1| putative deaminase [Escherichia coli]
 gi|209762962|gb|ACI79793.1| putative deaminase [Escherichia coli]
 gi|209762964|gb|ACI79794.1| putative deaminase [Escherichia coli]
 gi|209762966|gb|ACI79795.1| putative deaminase [Escherichia coli]
 gi|218366248|emb|CAR03995.1| tRNA-specific adenosine deaminase [Escherichia coli S88]
 gi|218428238|emb|CAR09014.1| tRNA-specific adenosine deaminase [Escherichia coli ED1a]
 gi|222034264|emb|CAP77005.1| tRNA-specific adenosine deaminase [Escherichia coli LF82]
 gi|226901433|gb|EEH87692.1| tRNA-specific adenosine deaminase [Escherichia sp. 3_2_53FAA]
 gi|290763657|gb|ADD57618.1| tRNA-specific adenosine deaminase [Escherichia coli O55:H7 str.
           CB9615]
 gi|291433476|gb|EFF06455.1| tRNA-specific adenosine deaminase [Escherichia coli B185]
 gi|294489520|gb|ADE88276.1| tRNA-specific adenosine deaminase [Escherichia coli IHE3034]
 gi|300308910|gb|EFJ63430.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Escherichia coli MS 200-1]
 gi|300459125|gb|EFK22618.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Escherichia coli MS 21-1]
 gi|307625893|gb|ADN70197.1| tRNA-specific adenosine deaminase [Escherichia coli UM146]
 gi|308927059|gb|EFP72533.1| tRNA-specific adenosine deaminase [Shigella dysenteriae 1617]
 gi|315288035|gb|EFU47437.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Escherichia coli MS 110-3]
 gi|315300515|gb|EFU59744.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Escherichia coli MS 16-3]
 gi|323188326|gb|EFZ73618.1| tRNA-specific adenosine deaminase [Escherichia coli RN587/1]
 gi|323949213|gb|EGB45104.1| cytidine and deoxycytidylate deaminase zinc-binding protein
           [Escherichia coli H252]
 gi|324013577|gb|EGB82796.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Escherichia coli MS 60-1]
 gi|326345048|gb|EGD68792.1| tRNA-specific adenosine-34 deaminase [Escherichia coli O157:H7 str.
           1044]
 gi|327252269|gb|EGE63941.1| tRNA-specific adenosine deaminase [Escherichia coli STEC_7v]
 gi|330912330|gb|EGH40840.1| tRNA-specific adenosine-34 deaminase [Escherichia coli AA86]
 gi|331043112|gb|EGI15252.1| tRNA-specific adenosine deaminase [Escherichia coli M605]
 gi|331048843|gb|EGI20919.1| tRNA-specific adenosine deaminase [Escherichia coli M718]
 gi|331054368|gb|EGI26395.1| tRNA-specific adenosine deaminase [Escherichia coli TA206]
          Length = 178

 Score =  224 bits (571), Expect = 4e-57,   Method: Composition-based stats.
 Identities = 56/147 (38%), Positives = 77/147 (52%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
               +M  A+  A+ A    E+PVGAV V NN++I    NR     D TAHAEI+A+R G
Sbjct: 18  SHEYWMRHAMTLAKRAWDEREVPVGAVLVHNNRVIGEGWNRPIGRHDPTAHAEIMALRQG 77

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
             ++    L +  LYVTLEPC MCA A+  +RI R+ +GA + K G   +          
Sbjct: 78  GLVMQNYRLIDATLYVTLEPCVMCAGAMIHSRIGRVVFGARDAKTGAAGSLMDVLHHPGM 137

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H  EI  GI       ++ DFF+ RR
Sbjct: 138 NHRVEITEGILADECAALLSDFFRMRR 164


>gi|205353664|ref|YP_002227465.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp.
           enterica serovar Gallinarum str. 287/91]
 gi|207857975|ref|YP_002244626.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp.
           enterica serovar Enteritidis str. P125109]
 gi|205273445|emb|CAR38422.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 287/91]
 gi|206709778|emb|CAR34130.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
 gi|326628768|gb|EGE35111.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp.
           enterica serovar Gallinarum str. 9]
          Length = 183

 Score =  224 bits (571), Expect = 4e-57,   Method: Composition-based stats.
 Identities = 55/147 (37%), Positives = 77/147 (52%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
               +M  AL  A+ A    E+PVGAV V N+++I    NR     D TAHAEI+A+R G
Sbjct: 18  DHEYWMRHALTLAKRAWDEREVPVGAVLVHNHRVIGEGWNRPIGRHDPTAHAEIMALRQG 77

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
             +L    L +  LYVTLEPC MCA A+  +RI R+ +GA + K G   +          
Sbjct: 78  GLVLQNYRLLDTTLYVTLEPCVMCAGAMVHSRIGRVVFGARDAKTGAAGSLIDVLHHPGM 137

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H  +I  G+       ++ DFF+ RR
Sbjct: 138 NHRVDIIEGVLRDECATLLSDFFRMRR 164


>gi|167758650|ref|ZP_02430777.1| hypothetical protein CLOSCI_00991 [Clostridium scindens ATCC 35704]
 gi|167663846|gb|EDS07976.1| hypothetical protein CLOSCI_00991 [Clostridium scindens ATCC 35704]
          Length = 157

 Score =  224 bits (571), Expect = 4e-57,   Method: Composition-based stats.
 Identities = 54/146 (36%), Positives = 80/146 (54%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
              +M  A+ +A+ A    E+P+G V V  +KII R  NR    K+  +HAE++AIR   
Sbjct: 5   DEKYMKEAIRQARKAYAIGEVPIGCVIVYKDKIIGRGYNRRMADKNTLSHAELIAIRKAS 64

Query: 64  RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123
           R +    L E  +YVTLEPC MC+ AI  +R+ R+  G  NPK G   +      +   +
Sbjct: 65  RKMGDWRLEECTMYVTLEPCQMCSGAIVQSRMSRVVVGCMNPKAGCAGSILNLLQMTEFN 124

Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149
           H  E+  G+ E+   Q+++DFFKE R
Sbjct: 125 HQAELTTGVLEEECSQMMKDFFKELR 150


>gi|329770051|ref|ZP_08261446.1| hypothetical protein HMPREF0433_01210 [Gemella sanguinis M325]
 gi|328837362|gb|EGF86992.1| hypothetical protein HMPREF0433_01210 [Gemella sanguinis M325]
          Length = 155

 Score =  224 bits (571), Expect = 4e-57,   Method: Composition-based stats.
 Identities = 50/149 (33%), Positives = 82/149 (55%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           MK+ + +M  ALEEA++A  + E+P+GAV V++ ++++   N   E +    HAE++AI+
Sbjct: 1   MKEHSYYMELALEEARSAYEKGEVPIGAVLVVDGQVVACGHNTREETQQALNHAEMIAIK 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
             C       L    LY T+EPC MC+ AI  AR+  + YGA +PK G   +     +  
Sbjct: 61  KACEKQGFWRLDNSYLYTTIEPCVMCSGAIVQARVENVIYGAKDPKYGCCGSCMDLVSDN 120

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H   +  G+ E     ++++FFKE R
Sbjct: 121 KFNHQANVISGVLEDECSSLMRNFFKELR 149


>gi|161502277|ref|YP_001569389.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:-- str. RSK2980]
 gi|160863624|gb|ABX20247.1| hypothetical protein SARI_00307 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 176

 Score =  224 bits (571), Expect = 5e-57,   Method: Composition-based stats.
 Identities = 57/147 (38%), Positives = 78/147 (53%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
               +M  AL  A+ A    E+PVGAV V N+++I    NR     D TAHAEI+A+R G
Sbjct: 18  DHEYWMRHALTLAKRAWDEREVPVGAVLVHNHRVIGEGWNRPIGRHDPTAHAEIMALRQG 77

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
             +L    L +  LYVTLEPC MCA A+  +RIRR+ +GA + K G   +          
Sbjct: 78  GLVLQNYRLLDTTLYVTLEPCVMCAGAMVHSRIRRVVFGARDAKTGAAGSLIDVLHHPGM 137

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H  EI  G+       ++ DFF+ RR
Sbjct: 138 NHRVEIIEGVLHDECAMLLSDFFRMRR 164


>gi|157371891|ref|YP_001479880.1| CMP/dCMP deaminase zinc-binding [Serratia proteamaculans 568]
 gi|157323655|gb|ABV42752.1| CMP/dCMP deaminase zinc-binding [Serratia proteamaculans 568]
          Length = 170

 Score =  224 bits (571), Expect = 5e-57,   Method: Composition-based stats.
 Identities = 58/147 (39%), Positives = 78/147 (53%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
               +M  AL  A  A    E+PVGA+ VL+N++I    NR     D TAHAEI+A+R G
Sbjct: 5   NDEYWMRQALRLALRAQEEGEVPVGALLVLDNQVIGEGWNRPIGRHDPTAHAEIMALRQG 64

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
             +L    L    LYVTLEPC MCA A+  +RIRRL YGA++ K G   +          
Sbjct: 65  GAVLQNYRLLNATLYVTLEPCVMCAGAMVHSRIRRLVYGAADVKTGAAGSLVDILRHPGM 124

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H  EI  G+  +     + +FF+ RR
Sbjct: 125 NHQVEILSGVLAEECAATLSNFFRMRR 151


>gi|126652937|ref|ZP_01725079.1| probable cytidine/deoxycytidylate deaminase family protein
           [Bacillus sp. B14905]
 gi|126590267|gb|EAZ84389.1| probable cytidine/deoxycytidylate deaminase family protein
           [Bacillus sp. B14905]
          Length = 170

 Score =  224 bits (571), Expect = 5e-57,   Method: Composition-based stats.
 Identities = 58/148 (39%), Positives = 87/148 (58%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           +   +FM  ALEEA+ AA+  E+P+GAV V + +II+RA N     ++ T HAE++ I+ 
Sbjct: 5   ETDRLFMKQALEEAKKAAILGEVPIGAVLVYDGEIIARAHNLRETTQNATTHAELMVIQE 64

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
            C+ +    L +  LYVTLEPC MCA AI  +R+ R+ YGA + K G +++  +    A 
Sbjct: 65  ACQKIGSWRLEKTTLYVTLEPCPMCAGAILQSRVPRVVYGARDMKAGCVDSLYRLLNDAR 124

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H  E+  GI      QI+ DFF+  R
Sbjct: 125 FNHECEVSEGILAAECGQILTDFFRALR 152


>gi|297616226|ref|YP_003701385.1| CMP/dCMP deaminase zinc-binding protein [Syntrophothermus
           lipocalidus DSM 12680]
 gi|297144063|gb|ADI00820.1| CMP/dCMP deaminase zinc-binding protein [Syntrophothermus
           lipocalidus DSM 12680]
          Length = 155

 Score =  223 bits (570), Expect = 5e-57,   Method: Composition-based stats.
 Identities = 54/146 (36%), Positives = 79/146 (54%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
              FM  A+E    A  + E+PVGAV V N +IIS A N   + +D TAHAE+LAI+   
Sbjct: 7   DEDFMRRAVELGWAAFHQGEVPVGAVVVKNGEIISSAHNEKEKRQDATAHAEMLAIQRAS 66

Query: 64  RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123
           + L    L +  LY T+EPC MCA AI  ARI+++ +GA + K G   +          +
Sbjct: 67  QALGTWRLQDTTLYSTIEPCPMCAGAIVQARIKKVVFGARDLKAGAGGSLINVLDFPGLN 126

Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149
           H  E+  G+ E    +++ +FF+  R
Sbjct: 127 HRVEVIEGVLEDECTELMTEFFRRLR 152


>gi|167038582|ref|YP_001666160.1| CMP/dCMP deaminase [Thermoanaerobacter pseudethanolicus ATCC 33223]
 gi|167038705|ref|YP_001661690.1| CMP/dCMP deaminase [Thermoanaerobacter sp. X514]
 gi|256751425|ref|ZP_05492303.1| CMP/dCMP deaminase zinc-binding [Thermoanaerobacter ethanolicus
           CCSD1]
 gi|300913736|ref|ZP_07131053.1| CMP/dCMP deaminase zinc-binding [Thermoanaerobacter sp. X561]
 gi|307723248|ref|YP_003902999.1| CMP/dCMP deaminase zinc-binding protein [Thermoanaerobacter sp.
           X513]
 gi|320116977|ref|YP_004187136.1| CMP/dCMP deaminase zinc-binding protein [Thermoanaerobacter brockii
           subsp. finnii Ako-1]
 gi|166852945|gb|ABY91354.1| CMP/dCMP deaminase, zinc-binding [Thermoanaerobacter sp. X514]
 gi|166857416|gb|ABY95824.1| CMP/dCMP deaminase, zinc-binding [Thermoanaerobacter
           pseudethanolicus ATCC 33223]
 gi|256749644|gb|EEU62670.1| CMP/dCMP deaminase zinc-binding [Thermoanaerobacter ethanolicus
           CCSD1]
 gi|300890421|gb|EFK85566.1| CMP/dCMP deaminase zinc-binding [Thermoanaerobacter sp. X561]
 gi|307580309|gb|ADN53708.1| CMP/dCMP deaminase zinc-binding protein [Thermoanaerobacter sp.
           X513]
 gi|319930068|gb|ADV80753.1| CMP/dCMP deaminase zinc-binding protein [Thermoanaerobacter brockii
           subsp. finnii Ako-1]
          Length = 148

 Score =  223 bits (570), Expect = 5e-57,   Method: Composition-based stats.
 Identities = 60/145 (41%), Positives = 81/145 (55%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           N FM  AL EA+ +    E+PVGAV V   +II R  N+     D TAHAEI+AI+  C+
Sbjct: 3   NKFMEAALLEAKKSYQLGEVPVGAVIVKEGQIIGRGFNQKESTNDATAHAEIIAIKEACK 62

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
            L    L +  +YVTLEPC MCA AI  ARI+R+Y GA + K G           +    
Sbjct: 63  TLGSWRLDDCSMYVTLEPCPMCAGAILEARIKRVYIGAESDKSGAAGTVVDILNNSYLGS 122

Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149
             E+Y GI E+  + +++DFF+  R
Sbjct: 123 KTEVYFGIMEEECKTLLKDFFENLR 147


>gi|218701072|ref|YP_002408701.1| tRNA-specific adenosine deaminase [Escherichia coli IAI39]
 gi|218371058|emb|CAR18885.1| tRNA-specific adenosine deaminase [Escherichia coli IAI39]
          Length = 178

 Score =  223 bits (570), Expect = 5e-57,   Method: Composition-based stats.
 Identities = 56/147 (38%), Positives = 77/147 (52%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
               +M  A+  A+ A    E+PVGAV V NN++I    NR     D TAHAEI+A+R G
Sbjct: 18  SHEYWMRHAMTLAKRAWDEREVPVGAVLVHNNRVIGEGWNRPIGRHDPTAHAEIMALRQG 77

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
             ++    L +  LYVTLEPC MCA A+  +RI R+ +GA + K G   +          
Sbjct: 78  GLVMQNYRLIDATLYVTLEPCVMCAGAMIHSRIGRVVFGARDAKTGAAGSLMDVLHHPGM 137

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H  EI  GI       ++ DFF+ RR
Sbjct: 138 NHRVEIIEGILADECAALLSDFFRMRR 164


>gi|228989231|ref|ZP_04149225.1| hypothetical protein bpmyx0001_110 [Bacillus pseudomycoides DSM
           12442]
 gi|228995414|ref|ZP_04155085.1| hypothetical protein bmyco0003_200 [Bacillus mycoides Rock3-17]
 gi|229003028|ref|ZP_04160886.1| hypothetical protein bmyco0002_210 [Bacillus mycoides Rock1-4]
 gi|228758228|gb|EEM07415.1| hypothetical protein bmyco0002_210 [Bacillus mycoides Rock1-4]
 gi|228764340|gb|EEM13216.1| hypothetical protein bmyco0003_200 [Bacillus mycoides Rock3-17]
 gi|228770506|gb|EEM19076.1| hypothetical protein bpmyx0001_110 [Bacillus pseudomycoides DSM
           12442]
          Length = 165

 Score =  223 bits (570), Expect = 6e-57,   Method: Composition-based stats.
 Identities = 59/145 (40%), Positives = 82/145 (56%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M++   FM  A+EEA+ A    E+P+GAV VL  ++IS A N     +   AHAE+LAI 
Sbjct: 1   MEQDIYFMQLAIEEAKKAEEIQEVPIGAVIVLGGEVISVAHNLRETEQRSIAHAELLAID 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
             C+ L    L    LYVTLEPC MCA  I L+R++R+ YGAS+PKGG         T  
Sbjct: 61  EACKKLGTWRLENATLYVTLEPCPMCAGGIVLSRVKRVVYGASDPKGGCAGTLMNLLTDE 120

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFF 145
             +H  E+  G+ E+    ++ +FF
Sbjct: 121 RFNHQCEVVSGVMEEECGMLLTNFF 145


>gi|260589044|ref|ZP_05854957.1| tRNA-specific adenosine deaminase [Blautia hansenii DSM 20583]
 gi|331083249|ref|ZP_08332362.1| hypothetical protein HMPREF0992_01286 [Lachnospiraceae bacterium
           6_1_63FAA]
 gi|260540823|gb|EEX21392.1| tRNA-specific adenosine deaminase [Blautia hansenii DSM 20583]
 gi|330404330|gb|EGG83875.1| hypothetical protein HMPREF0992_01286 [Lachnospiraceae bacterium
           6_1_63FAA]
          Length = 164

 Score =  223 bits (570), Expect = 6e-57,   Method: Composition-based stats.
 Identities = 57/149 (38%), Positives = 77/149 (51%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M +   FM  A ++A  A    E+P+G V V   KII+R  NR    K+  +HAEI AIR
Sbjct: 1   MTEDERFMREAKKQAMKAYALREVPIGCVIVYEGKIIARGYNRRNTDKNTVSHAEINAIR 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              + L    L    LYVTLEPC MCA AI  AR+ R+  G+ NPK G   +      + 
Sbjct: 61  KASKKLGDWRLEGCTLYVTLEPCQMCAGAIIQARVDRVVIGSMNPKAGCAGSVLNLLEMD 120

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  E+  G+ E+    ++  FFKE R
Sbjct: 121 GFNHKAEVTRGVLEEECSSMLSGFFKELR 149


>gi|225376320|ref|ZP_03753541.1| hypothetical protein ROSEINA2194_01960 [Roseburia inulinivorans DSM
           16841]
 gi|225211696|gb|EEG94050.1| hypothetical protein ROSEINA2194_01960 [Roseburia inulinivorans DSM
           16841]
          Length = 166

 Score =  223 bits (570), Expect = 6e-57,   Method: Composition-based stats.
 Identities = 49/145 (33%), Positives = 76/145 (52%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M +   +M  A+ EA+ A   +E+P+G V V +  II+R  NR     +  AHAE+ AI+
Sbjct: 3   MTQDEKYMKAAIREAKKAYALDEVPIGCVIVQDGTIIARGYNRRNTEGNTLAHAELTAIK 62

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              +      L +  +YVTLEPC MCA AI  +R++++     NPK G   +      +A
Sbjct: 63  KASKKTGDWRLEDCTMYVTLEPCQMCAGAIVQSRMKKVVIATMNPKAGCAGSVLNLLQMA 122

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFF 145
             +H  EI  G+ E+    ++ DFF
Sbjct: 123 AFNHQVEIEKGVLEEECSMMLSDFF 147


>gi|229083334|ref|ZP_04215694.1| hypothetical protein bcere0022_180 [Bacillus cereus Rock3-44]
 gi|228699981|gb|EEL52606.1| hypothetical protein bcere0022_180 [Bacillus cereus Rock3-44]
          Length = 165

 Score =  223 bits (570), Expect = 6e-57,   Method: Composition-based stats.
 Identities = 58/145 (40%), Positives = 83/145 (57%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M++   FM  A+EEA+ A    E+P+GAV VL+ +++S A N     +   AHAE+LAI 
Sbjct: 1   MEQDIYFMQLAIEEAKKAEEIQEVPIGAVIVLDGEVVSVAHNLRETEQRSIAHAELLAID 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
             C+ L    L    LYVTLEPC MCA  I L+R++R+ YGAS+PKGG         T  
Sbjct: 61  EACKKLGTWRLENATLYVTLEPCPMCAGGIVLSRVKRVVYGASDPKGGCAGTLMNLLTDE 120

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFF 145
             +H  E+  G+ E+    ++ +FF
Sbjct: 121 RFNHQCEVVSGVMEEECGTLLTNFF 145


>gi|16804756|ref|NP_466241.1| hypothetical protein lmo2719 [Listeria monocytogenes EGD-e]
 gi|224502871|ref|ZP_03671178.1| hypothetical protein LmonFR_10179 [Listeria monocytogenes FSL
           R2-561]
 gi|255029049|ref|ZP_05301000.1| hypothetical protein LmonL_07681 [Listeria monocytogenes LO28]
 gi|16412219|emb|CAD00932.1| lmo2719 [Listeria monocytogenes EGD-e]
          Length = 156

 Score =  223 bits (570), Expect = 6e-57,   Method: Composition-based stats.
 Identities = 59/144 (40%), Positives = 86/144 (59%)

Query: 6   VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
            FM  ALEEA+ A    E+P+GAV VL+ +II RA N     ++   HAE+LAI+  C+ 
Sbjct: 5   FFMQQALEEAEKARDIGEVPIGAVVVLDGEIIGRAHNLRETSQNAVTHAELLAIQDACKH 64

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
            +   L   +LYVTLEPC MC+ AI L+RI ++YYGA +PK G   +          +H+
Sbjct: 65  QNSWRLSGAELYVTLEPCPMCSGAILLSRIEKVYYGAKDPKAGTAGSLMNLLQDDRFNHT 124

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
            E+  G+ E  S ++++ FF+E R
Sbjct: 125 CEVEAGLMESESSEMLKSFFQELR 148


>gi|148543562|ref|YP_001270932.1| tRNA-adenosine deaminase [Lactobacillus reuteri DSM 20016]
 gi|184152969|ref|YP_001841310.1| cytosine/adenosine deaminase [Lactobacillus reuteri JCM 1112]
 gi|227363478|ref|ZP_03847600.1| tRNA-adenosine deaminase [Lactobacillus reuteri MM2-3]
 gi|325681912|ref|ZP_08161430.1| tRNA-specific adenosine deaminase [Lactobacillus reuteri MM4-1A]
 gi|148530596|gb|ABQ82595.1| tRNA-adenosine deaminase [Lactobacillus reuteri DSM 20016]
 gi|183224313|dbj|BAG24830.1| cytosine/adenosine deaminase [Lactobacillus reuteri JCM 1112]
 gi|227071492|gb|EEI09793.1| tRNA-adenosine deaminase [Lactobacillus reuteri MM2-3]
 gi|324978556|gb|EGC15505.1| tRNA-specific adenosine deaminase [Lactobacillus reuteri MM4-1A]
          Length = 170

 Score =  223 bits (570), Expect = 6e-57,   Method: Composition-based stats.
 Identities = 59/152 (38%), Positives = 90/152 (59%), Gaps = 7/152 (4%)

Query: 1   MKKGN-------VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAH 53
           MKK N        FM  A+ EA+ A + +E+P+GA+ V + ++I R  N   + +DVT H
Sbjct: 1   MKKNNSSLSEQQKFMKMAIAEAKQARILDEVPIGAIVVHDGQVIGRGHNMREKFQDVTYH 60

Query: 54  AEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENG 113
           AE+LAI   C  L    L + DLYVTLEPC MC+ AI  ARI+ +YYGA++PK G +++ 
Sbjct: 61  AEMLAIMEACTNLGSWRLEDCDLYVTLEPCIMCSGAIINARIKNVYYGAADPKAGAVDSL 120

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
               + +  +H   ++ GI      Q++++FF
Sbjct: 121 YHLLSDSRLNHQVNVHSGILGDECSQMLKNFF 152


>gi|26248923|ref|NP_754963.1| tRNA-specific adenosine deaminase [Escherichia coli CFT073]
 gi|227887593|ref|ZP_04005398.1| tRNA-specific adenosine deaminase [Escherichia coli 83972]
 gi|300982262|ref|ZP_07175973.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Escherichia coli MS 45-1]
 gi|301047197|ref|ZP_07194289.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Escherichia coli MS 185-1]
 gi|312965474|ref|ZP_07779706.1| tRNA-specific adenosine deaminase [Escherichia coli 2362-75]
 gi|26109329|gb|AAN81531.1|AE016764_213 Hypothetical protein yfhC [Escherichia coli CFT073]
 gi|227835943|gb|EEJ46409.1| tRNA-specific adenosine deaminase [Escherichia coli 83972]
 gi|300300874|gb|EFJ57259.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Escherichia coli MS 185-1]
 gi|300408816|gb|EFJ92354.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Escherichia coli MS 45-1]
 gi|307554578|gb|ADN47353.1| tRNA-specific adenosine deaminase [Escherichia coli ABU 83972]
 gi|312289894|gb|EFR17782.1| tRNA-specific adenosine deaminase [Escherichia coli 2362-75]
 gi|315292466|gb|EFU51818.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Escherichia coli MS 153-1]
 gi|324008467|gb|EGB77686.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Escherichia coli MS 57-2]
          Length = 178

 Score =  223 bits (570), Expect = 6e-57,   Method: Composition-based stats.
 Identities = 56/147 (38%), Positives = 77/147 (52%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
               +M  A+  A+ A    E+PVGAV V NN++I    NR     D TAHAEI+A+R G
Sbjct: 18  SHEYWMRHAMTLAKRAWDEREVPVGAVLVHNNRVIGEGWNRPIGRHDPTAHAEIMALRQG 77

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
             ++    L +  LYVTLEPC MCA A+  +RI R+ +GA + K G   +          
Sbjct: 78  GLVMQNYRLIDATLYVTLEPCVMCAGAMIHSRIGRVVFGARDAKTGAAGSLMDVLHHPGM 137

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H  EI  GI       ++ DFF+ RR
Sbjct: 138 NHRVEITEGILADECAALLSDFFRMRR 164


>gi|238784197|ref|ZP_04628210.1| tRNA-specific adenosine deaminase [Yersinia bercovieri ATCC 43970]
 gi|238714906|gb|EEQ06905.1| tRNA-specific adenosine deaminase [Yersinia bercovieri ATCC 43970]
          Length = 181

 Score =  223 bits (570), Expect = 6e-57,   Method: Composition-based stats.
 Identities = 59/147 (40%), Positives = 82/147 (55%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
               +M  AL  A  A    E+PVGAV VL+N++I    NR+    D TAHAEI+A+R G
Sbjct: 18  SDEYWMQRALMLALRAQEEGEVPVGAVLVLDNQVIGEGWNRSICDSDPTAHAEIMALRQG 77

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
            +++    L +  LYVTLEPC MCA A+  +RIRRL YGA++ K G   +          
Sbjct: 78  GQVVQNYRLLDATLYVTLEPCVMCAGAMVHSRIRRLVYGANDLKTGAAGSLLDILRHPGM 137

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H  EI  G+  +   Q +  FF++RR
Sbjct: 138 NHQVEISAGVLAEACSQQLSAFFRQRR 164


>gi|308050412|ref|YP_003913978.1| tRNA-adenosine deaminase [Ferrimonas balearica DSM 9799]
 gi|307632602|gb|ADN76904.1| tRNA-adenosine deaminase [Ferrimonas balearica DSM 9799]
          Length = 170

 Score =  223 bits (570), Expect = 6e-57,   Method: Composition-based stats.
 Identities = 54/149 (36%), Positives = 83/149 (55%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M++   +M+ A++ A+ A    E+PVGAV V + ++I+   N++  L D +AHAE+L +R
Sbjct: 1   MEQHQKWMAHAMKLAEQAEALGEVPVGAVLVRDGEVIAEGFNQSITLNDPSAHAEMLCLR 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              + L    L +  LYVTLEPC+MCA A+  ARI  L YGAS+ K G   +        
Sbjct: 61  AAGQALENYRLLDTTLYVTLEPCSMCAGAMVHARIGTLVYGASDAKTGAAGSVMDLVRHP 120

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  E+  G+  +     +  FFK+RR
Sbjct: 121 ALNHQLEVISGVLSEPCATQLSAFFKKRR 149


>gi|197264537|ref|ZP_03164611.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA23]
 gi|205356928|ref|ZP_02343159.2| tRNA-specific adenosine deaminase [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA29]
 gi|197242792|gb|EDY25412.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA23]
 gi|205325427|gb|EDZ13266.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA29]
          Length = 172

 Score =  223 bits (570), Expect = 6e-57,   Method: Composition-based stats.
 Identities = 56/147 (38%), Positives = 77/147 (52%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
               +M  AL  A+ A    E+PVGAV V N+++I    NR     D TAHAEI+A+R G
Sbjct: 7   DHEYWMRHALTLAKRAWDEREVPVGAVLVHNHRVIGEGWNRPIGRHDPTAHAEIMALRQG 66

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
             +L    L +  LYVTLEPC MCA A+  +RI R+ +GA + K G   +          
Sbjct: 67  GLVLQNYRLLDTTLYVTLEPCVMCAGAMVHSRIGRVVFGARDAKTGAAGSLIDVLHHPGM 126

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H  EI  G+       ++ DFF+ RR
Sbjct: 127 NHRVEIIEGVLRDECATLLSDFFRMRR 153


>gi|312173235|emb|CBX81490.1| tRNA-specific adenosine deaminase [Erwinia amylovora ATCC BAA-2158]
          Length = 166

 Score =  223 bits (570), Expect = 6e-57,   Method: Composition-based stats.
 Identities = 55/147 (37%), Positives = 78/147 (53%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
               +M  AL  A+ A    E+PVGAV VL+N++I    NR     D TAHAE++A+R G
Sbjct: 5   NDEYWMRHALRLARRAWDEGEVPVGAVLVLDNQVIGEGWNRPIGHHDPTAHAEMMALRQG 64

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
            +++    L +  LYVTLEPC MCA A+  +RI RL YGA + K G   +          
Sbjct: 65  GKMIENYRLLDTTLYVTLEPCVMCAGAMIHSRIGRLVYGARDAKTGAAGSLLDVLGHPGM 124

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H      G+       ++ DFF++RR
Sbjct: 125 NHQVPAECGLLNDECAAMLSDFFRQRR 151


>gi|330007694|ref|ZP_08306033.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Klebsiella sp. MS 92-3]
 gi|328535375|gb|EGF61857.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Klebsiella sp. MS 92-3]
          Length = 180

 Score =  223 bits (570), Expect = 6e-57,   Method: Composition-based stats.
 Identities = 58/147 (39%), Positives = 79/147 (53%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
               +M  AL  A+ A    E+PVGAV V NN++I    NR     D TAHAEI+A+R G
Sbjct: 18  NDEYWMRHALTLAKRAWEEGEVPVGAVLVHNNQVIGEGWNRPIGRHDPTAHAEIMALRQG 77

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
             +L    L +  LYVTLEPC MCA A+  +RI RL +GA + K G + +          
Sbjct: 78  GLVLQNYRLIDATLYVTLEPCVMCAGAMVHSRIARLVFGARDAKTGAVGSLMDVLHHPGM 137

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H  EI  G+  +    ++ DFF+ RR
Sbjct: 138 NHRVEISEGVLAESCSAMLSDFFRWRR 164


>gi|323694203|ref|ZP_08108379.1| cytidine and deoxycytidylate deaminase [Clostridium symbiosum
           WAL-14673]
 gi|323501676|gb|EGB17562.1| cytidine and deoxycytidylate deaminase [Clostridium symbiosum
           WAL-14673]
          Length = 155

 Score =  223 bits (570), Expect = 6e-57,   Method: Composition-based stats.
 Identities = 54/149 (36%), Positives = 77/149 (51%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M     +M  A+ EA+ A    E+P+G V V   KII R  NR    K+V +HAEI AI+
Sbjct: 1   MTDDEKYMRAAIREAKKAYALGEVPIGCVIVFEGKIIGRGYNRRIADKNVLSHAEINAIK 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
             C+ +    L    +Y+TLEPC MCA AI  ARI ++  G+ NPK G   +        
Sbjct: 61  KACKKMGDWRLEGCTMYITLEPCPMCAGAIVQARIPKVLIGSMNPKAGCAGSVMNLLDEK 120

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  E   GI  +    ++++FF+E R
Sbjct: 121 GFNHQVETEIGILGEECSGMLKEFFRELR 149


>gi|218706062|ref|YP_002413581.1| tRNA -specific adenosine deaminase [Escherichia coli UMN026]
 gi|293406001|ref|ZP_06649993.1| tRNA-specific adenosine deaminase [Escherichia coli FVEC1412]
 gi|298381801|ref|ZP_06991400.1| tRNA-specific adenosine deaminase [Escherichia coli FVEC1302]
 gi|300898326|ref|ZP_07116674.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Escherichia coli MS 198-1]
 gi|218433159|emb|CAR14055.1| tRNA-specific adenosine deaminase [Escherichia coli UMN026]
 gi|284922509|emb|CBG35596.1| tRNA-specific adenosine deaminase [Escherichia coli 042]
 gi|291428209|gb|EFF01236.1| tRNA-specific adenosine deaminase [Escherichia coli FVEC1412]
 gi|298279243|gb|EFI20757.1| tRNA-specific adenosine deaminase [Escherichia coli FVEC1302]
 gi|300357988|gb|EFJ73858.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Escherichia coli MS 198-1]
          Length = 178

 Score =  223 bits (570), Expect = 6e-57,   Method: Composition-based stats.
 Identities = 56/147 (38%), Positives = 77/147 (52%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
               +M  A+  A+ A    E+PVGAV V NN++I    NR     D TAHAEI+A+R G
Sbjct: 18  SHEYWMRHAMTLAKRAWDEREVPVGAVLVHNNRVIGEGWNRPIGRHDPTAHAEIMALRQG 77

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
             ++    L +  LYVTLEPC MCA A+  +RI R+ +GA + K G   +          
Sbjct: 78  GLVMQNYRLIDATLYVTLEPCVMCAGAMIHSRIGRVVFGARDAKTGAAGSLMDVLHHPGM 137

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H  EI  GI       ++ DFF+ RR
Sbjct: 138 NHRVEITEGILADECAALLSDFFRMRR 164


>gi|89100955|ref|ZP_01173801.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein
           [Bacillus sp. NRRL B-14911]
 gi|89084326|gb|EAR63481.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein
           [Bacillus sp. NRRL B-14911]
          Length = 180

 Score =  223 bits (570), Expect = 6e-57,   Method: Composition-based stats.
 Identities = 60/146 (41%), Positives = 85/146 (58%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
             + +M  A+EEA+ A    E+P+GAV VL+ KIISRA N     ++  AHAE+LAI   
Sbjct: 11  NDDDYMKEAIEEAKKAGELGEVPIGAVVVLDGKIISRAHNLRESNQNAVAHAELLAIEEA 70

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
           C +L    L +  LYVTLEPC MC+ AI L+RI+R+ YGA++PKGG              
Sbjct: 71  CGMLGTWRLEDAALYVTLEPCAMCSGAIILSRIKRVVYGAADPKGGCAGTFMNLLQDERF 130

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKER 148
           +H  E+  G+ E+    ++ DFF+  
Sbjct: 131 NHQSEVSAGVLEEECGSLLTDFFRAL 156


>gi|290476033|ref|YP_003468930.1| TadA, tRNA-specific adenosine deaminase [Xenorhabdus bovienii
           SS-2004]
 gi|289175363|emb|CBJ82166.1| TadA, tRNA-specific adenosine deaminase [Xenorhabdus bovienii
           SS-2004]
          Length = 169

 Score =  223 bits (570), Expect = 7e-57,   Method: Composition-based stats.
 Identities = 63/147 (42%), Positives = 80/147 (54%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
               +M  A+E A  A  ++EIPVGAV V NNKII+   N      D TAHAEI+A+R G
Sbjct: 6   SDEYWMRRAMELAMQAQSQDEIPVGAVLVANNKIIAEGYNHPITEHDPTAHAEIIALRRG 65

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
              L    L    LYVTLEPC MCA A+  +RI+RL YGAS+ K G   +          
Sbjct: 66  GIELQNYRLLNTTLYVTLEPCVMCAGAMVHSRIQRLVYGASDMKTGAAGSLIDILRHPGM 125

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H  EI  G+  Q    ++  FFK+RR
Sbjct: 126 NHQIEITAGVLAQECATMLSTFFKQRR 152


>gi|90579814|ref|ZP_01235622.1| Putative cytosine/adenosine deaminase [Vibrio angustum S14]
 gi|90438699|gb|EAS63882.1| Putative cytosine/adenosine deaminase [Vibrio angustum S14]
          Length = 175

 Score =  223 bits (569), Expect = 7e-57,   Method: Composition-based stats.
 Identities = 55/147 (37%), Positives = 77/147 (52%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
               FM  A+E A  A    E+PVGAV V N +++    NR+    D TAHAEI+A+R  
Sbjct: 9   NDEYFMRRAIELAAKAEEEGEVPVGAVVVYNGQVVGEGWNRSIGQHDATAHAEIMALRQA 68

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
            ++L    L +  LYVTLEPC MCA A+   R+ ++ YGA + K G   +     +    
Sbjct: 69  GKVLENYRLIDTTLYVTLEPCPMCAGAMVHCRVGKVVYGADDLKTGAAGSTMNLLSYDGV 128

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H  E   G+  +  R  +Q FFK RR
Sbjct: 129 NHHVEQTSGVLVEECRAQLQAFFKRRR 155


>gi|294496892|ref|YP_003560592.1| tRNA-specific adenosine deaminase [Bacillus megaterium QM B1551]
 gi|294346829|gb|ADE67158.1| tRNA-specific adenosine deaminase [Bacillus megaterium QM B1551]
          Length = 156

 Score =  223 bits (569), Expect = 7e-57,   Method: Composition-based stats.
 Identities = 54/149 (36%), Positives = 83/149 (55%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M     +M  A++EA  A  + E+P+GAV V N+++++ A N     +   AHAE+LAI 
Sbjct: 1   MLNDEKYMRLAIDEALKAKDKLEVPIGAVIVQNDEVVASAYNLRETEQRSVAHAELLAID 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
             C+ L    L +  LYVTLEPC MCA AI L+R++R+ +GA +PKGG            
Sbjct: 61  EACKKLGTWRLEDATLYVTLEPCPMCAGAIVLSRVKRVVFGAYDPKGGCAGTLLNLLEFE 120

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  ++  G+ E+    ++  FF+E R
Sbjct: 121 KFNHQAQVVGGMLEEECGSLLTTFFRELR 149


>gi|146293740|ref|YP_001184164.1| CMP/dCMP deaminase, zinc-binding [Shewanella putrefaciens CN-32]
 gi|145565430|gb|ABP76365.1| tRNA-adenosine deaminase [Shewanella putrefaciens CN-32]
          Length = 164

 Score =  223 bits (569), Expect = 7e-57,   Method: Composition-based stats.
 Identities = 51/146 (34%), Positives = 73/146 (50%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
              +M  A++ A+ A    E+PVGAV V + + I+   N +    D TAHAEIL +R   
Sbjct: 2   DEYWMQVAMQMAEKAEAAGEVPVGAVLVKDGQQIATGYNLSISQHDPTAHAEILCLRSAG 61

Query: 64  RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123
           + L    L +  LY+TLEPC MCA A+  +RI R+ YGA + K G              +
Sbjct: 62  KKLENYRLLDATLYITLEPCAMCAGAMVHSRIARVVYGARDEKTGAAGTVVNLLQHPAFN 121

Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149
           H  E+  G+  +     +  FFK RR
Sbjct: 122 HQVEVTSGVLAEACSAQLSRFFKRRR 147


>gi|194735718|ref|YP_002115631.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. CVM19633]
 gi|197301052|ref|ZP_02663371.2| tRNA-specific adenosine deaminase [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. SL480]
 gi|204929496|ref|ZP_03220570.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp.
           enterica serovar Javiana str. GA_MM04042433]
 gi|194711220|gb|ACF90441.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. CVM19633]
 gi|197288879|gb|EDY28252.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. SL480]
 gi|204321215|gb|EDZ06415.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp.
           enterica serovar Javiana str. GA_MM04042433]
          Length = 172

 Score =  223 bits (569), Expect = 7e-57,   Method: Composition-based stats.
 Identities = 55/147 (37%), Positives = 77/147 (52%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
               +M  AL  A+ A    E+PVGAV V N+++I    NR     D TAHAEI+A+R G
Sbjct: 7   DHEYWMRHALTLAKRAWDEREVPVGAVLVHNHRVIGEGWNRPIGRHDPTAHAEIMALRQG 66

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
             +L    L +  LYVTLEPC MCA A+  +RI R+ +GA + K G   +          
Sbjct: 67  GLVLQNYRLLDTTLYVTLEPCVMCAGAMVHSRIGRVVFGARDAKTGAAGSLIDVLHHPGM 126

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H  +I  G+       ++ DFF+ RR
Sbjct: 127 NHRVDIIEGVLRDECATLLSDFFRMRR 153


>gi|197119924|ref|YP_002140351.1| tRNA (adenosine-34) deaminase [Geobacter bemidjiensis Bem]
 gi|197089284|gb|ACH40555.1| tRNA (adenosine-34) deaminase [Geobacter bemidjiensis Bem]
          Length = 166

 Score =  223 bits (569), Expect = 7e-57,   Method: Composition-based stats.
 Identities = 52/148 (35%), Positives = 82/148 (55%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           +  + +M  A+ +A+ A    E+P+GAV V +  II+R  N     +D  AHAE++AIR 
Sbjct: 3   RDDHYWMGKAIAQARRAEAIGEVPIGAVIVKDGVIIARGHNLRESNQDPAAHAEMIAIRK 62

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
             + L+   L    LYVTLEPCTMC  A+ L+R+ R+ +G+ +PKGG   +         
Sbjct: 63  AAKKLASWRLTGATLYVTLEPCTMCMGAVILSRLDRVVFGSYDPKGGAAGSLYDLSDDKR 122

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +HS  + PG+  + +  ++  FF E R
Sbjct: 123 LNHSVVLTPGVRGEETSSMLSGFFAELR 150


>gi|47095526|ref|ZP_00233135.1| cytidine/deoxycytidylate deaminase family protein [Listeria
           monocytogenes str. 1/2a F6854]
 gi|254899824|ref|ZP_05259748.1| cytidine/deoxycytidylate deaminase family protein [Listeria
           monocytogenes J0161]
 gi|254912971|ref|ZP_05262983.1| cytidine/deoxycytidylate deaminase family protein [Listeria
           monocytogenes J2818]
 gi|254937352|ref|ZP_05269049.1| cytidine/deoxycytidylate deaminase [Listeria monocytogenes F6900]
 gi|255025258|ref|ZP_05297244.1| cytidine/deoxycytidylate deaminase family protein [Listeria
           monocytogenes FSL J2-003]
 gi|284800395|ref|YP_003412260.1| hypothetical protein LM5578_0141 [Listeria monocytogenes 08-5578]
 gi|284993581|ref|YP_003415349.1| hypothetical protein LM5923_0141 [Listeria monocytogenes 08-5923]
 gi|47016136|gb|EAL07060.1| cytidine/deoxycytidylate deaminase family protein [Listeria
           monocytogenes str. 1/2a F6854]
 gi|258609958|gb|EEW22566.1| cytidine/deoxycytidylate deaminase [Listeria monocytogenes F6900]
 gi|284055957|gb|ADB66898.1| hypothetical protein LM5578_0141 [Listeria monocytogenes 08-5578]
 gi|284059048|gb|ADB69987.1| hypothetical protein LM5923_0141 [Listeria monocytogenes 08-5923]
 gi|293590973|gb|EFF99307.1| cytidine/deoxycytidylate deaminase family protein [Listeria
           monocytogenes J2818]
          Length = 156

 Score =  223 bits (569), Expect = 7e-57,   Method: Composition-based stats.
 Identities = 59/144 (40%), Positives = 86/144 (59%)

Query: 6   VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
            FM  ALEEA+ A    E+P+GAV VL+ +II RA N     ++   HAE+LAI+  C+ 
Sbjct: 5   FFMQQALEEAEKARDIGEVPIGAVVVLDGEIIGRAHNLRETSQNAVTHAELLAIQDACKH 64

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
            +   L   +LYVTLEPC MC+ AI L+RI ++YYGA +PK G   +          +H+
Sbjct: 65  QNSWRLSGAELYVTLEPCPMCSGAILLSRIEKVYYGAKDPKAGTAGSLMNLLQDDRFNHT 124

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
            E+  G+ E  S ++++ FF+E R
Sbjct: 125 CEVEAGLMESESSEMLKSFFQELR 148


>gi|254827285|ref|ZP_05231972.1| cytidine/deoxycytidylate deaminase [Listeria monocytogenes FSL
           N3-165]
 gi|258599666|gb|EEW12991.1| cytidine/deoxycytidylate deaminase [Listeria monocytogenes FSL
           N3-165]
          Length = 156

 Score =  223 bits (569), Expect = 8e-57,   Method: Composition-based stats.
 Identities = 58/144 (40%), Positives = 86/144 (59%)

Query: 6   VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
            FM  ALEEA+ A    E+P+GAV VL+ +II RA N     ++   HAE+LAI+  C+ 
Sbjct: 5   FFMQQALEEAEKARDIGEVPIGAVVVLDGEIIGRAHNLRETSQNAVTHAELLAIQDACKH 64

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
            +   L   +LYVTLEPC MC+ AI L+RI ++YYGA +PK G   +          +H+
Sbjct: 65  QNSWRLSGAELYVTLEPCPMCSGAILLSRIEKVYYGAKDPKAGTAGSLMNLLQDDRFNHT 124

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
            E+  G+ E+ S ++++ FF+  R
Sbjct: 125 CEVEAGLMEKESSEMLKSFFQNLR 148


>gi|223939608|ref|ZP_03631483.1| CMP/dCMP deaminase zinc-binding [bacterium Ellin514]
 gi|223891766|gb|EEF58252.1| CMP/dCMP deaminase zinc-binding [bacterium Ellin514]
          Length = 168

 Score =  223 bits (569), Expect = 8e-57,   Method: Composition-based stats.
 Identities = 66/149 (44%), Positives = 85/149 (57%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           ++  N FM  AL +A  A  R E+P+GAV V   +II+RA N+   LKD TAHAE+LAI 
Sbjct: 9   LQSDNYFMGEALRQAVKAYDREEVPIGAVIVREGRIIARAFNQVETLKDATAHAEMLAIT 68

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
                +    L E  LYVT EPC MCA AI   R+ R+ +G S+PKGGG           
Sbjct: 69  QAEAAVGDWRLNECTLYVTKEPCPMCAGAIVHVRLSRVVFGLSDPKGGGAGGAMNLLQFP 128

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
           T +H  EI  G+ EQ  R ++Q FF E+R
Sbjct: 129 TLNHRAEITHGVREQECRSLLQQFFSEQR 157


>gi|46908898|ref|YP_015287.1| cytidine/deoxycytidylate deaminase family protein [Listeria
           monocytogenes serotype 4b str. F2365]
 gi|254851976|ref|ZP_05241324.1| cytidine/deoxycytidylate deaminase [Listeria monocytogenes FSL
           R2-503]
 gi|254931009|ref|ZP_05264368.1| cytidine/deoxycytidylate deaminase [Listeria monocytogenes HPB2262]
 gi|254994111|ref|ZP_05276301.1| cytidine/deoxycytidylate deaminase family protein [Listeria
           monocytogenes FSL J2-064]
 gi|300763522|ref|ZP_07073520.1| cytidine/deoxycytidylate deaminase family protein [Listeria
           monocytogenes FSL N1-017]
 gi|46882171|gb|AAT05464.1| cytidine/deoxycytidylate deaminase family protein [Listeria
           monocytogenes serotype 4b str. F2365]
 gi|258605274|gb|EEW17882.1| cytidine/deoxycytidylate deaminase [Listeria monocytogenes FSL
           R2-503]
 gi|293582555|gb|EFF94587.1| cytidine/deoxycytidylate deaminase [Listeria monocytogenes HPB2262]
 gi|300515799|gb|EFK42848.1| cytidine/deoxycytidylate deaminase family protein [Listeria
           monocytogenes FSL N1-017]
 gi|328469576|gb|EGF40517.1| cytidine/deoxycytidylate deaminase family protein [Listeria
           monocytogenes 220]
 gi|332313149|gb|EGJ26244.1| tRNA-specific adenosine deaminase [Listeria monocytogenes str.
           Scott A]
          Length = 156

 Score =  223 bits (569), Expect = 8e-57,   Method: Composition-based stats.
 Identities = 58/144 (40%), Positives = 87/144 (60%)

Query: 6   VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
            FM  ALEEA+ A    E+P+GAV VL+ +II RA N     ++   HAE+LAI+  C+ 
Sbjct: 5   FFMQQALEEAEKARDIGEVPIGAVVVLDGEIIGRAHNLRETSQNAVTHAELLAIQDACKH 64

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
            +   L   +LYVTLEPC MC+ AI L+RI ++YYGA +PK G   +          +H+
Sbjct: 65  QNSWRLSGAELYVTLEPCPMCSGAILLSRIEKVYYGAKDPKAGTAGSLMNLLQDDRFNHT 124

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
            E+  G+ E+ S ++++ FF++ R
Sbjct: 125 CEVEAGLMEKESSEMLKSFFQDLR 148


>gi|227888770|ref|ZP_04006575.1| nucleoside deaminase [Lactobacillus johnsonii ATCC 33200]
 gi|227850607|gb|EEJ60693.1| nucleoside deaminase [Lactobacillus johnsonii ATCC 33200]
          Length = 160

 Score =  223 bits (569), Expect = 8e-57,   Method: Composition-based stats.
 Identities = 54/149 (36%), Positives = 89/149 (59%), Gaps = 1/149 (0%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIR 60
           ++   +M  A E+A+ A  + E+P+GAV V  +  +I    NR    +D T HAE++AIR
Sbjct: 5   EQKEKYMHLAFEQAKKAEEQGEVPIGAVVVDKDGNVIGEGYNRRELDEDATQHAEMIAIR 64

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
             C+ L+   L +  L++TLEPC MC+ AI  +R+  +YYGA +PK G   +    + + 
Sbjct: 65  QACKKLNSWRLVDCSLFITLEPCPMCSGAIINSRLVEVYYGAFDPKAGAAGSVIDLFKVE 124

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H P+IY G+   ++ Q+++DFF+E R
Sbjct: 125 KFNHHPKIYGGLFRDQAAQMLKDFFREIR 153


>gi|194451068|ref|YP_002046630.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL476]
 gi|195874089|ref|ZP_02700525.2| tRNA-specific adenosine deaminase [Salmonella enterica subsp.
           enterica serovar Newport str. SL317]
 gi|205357850|ref|ZP_02573795.2| tRNA-specific adenosine deaminase [Salmonella enterica subsp.
           enterica serovar 4,[5],12:i:- str. CVM23701]
 gi|205359212|ref|ZP_02668290.2| tRNA-specific adenosine deaminase [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL486]
 gi|205360435|ref|ZP_02683354.2| tRNA-specific adenosine deaminase [Salmonella enterica subsp.
           enterica serovar Hadar str. RI_05P066]
 gi|213053109|ref|ZP_03345987.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp.
           enterica serovar Typhi str. E00-7866]
 gi|213425288|ref|ZP_03358038.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp.
           enterica serovar Typhi str. E02-1180]
 gi|213586542|ref|ZP_03368368.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-0664]
 gi|213650179|ref|ZP_03380232.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp.
           enterica serovar Typhi str. J185]
 gi|213857782|ref|ZP_03384753.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp.
           enterica serovar Typhi str. M223]
 gi|150421689|sp|Q8XGY4|TADA_SALTI RecName: Full=tRNA-specific adenosine deaminase
 gi|150421690|sp|Q7CQ08|TADA_SALTY RecName: Full=tRNA-specific adenosine deaminase
 gi|194409372|gb|ACF69591.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL476]
 gi|195630767|gb|EDX49359.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp.
           enterica serovar Newport str. SL317]
 gi|205329109|gb|EDZ15873.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp.
           enterica serovar 4,[5],12:i:- str. CVM23701]
 gi|205337614|gb|EDZ24378.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL486]
 gi|205349365|gb|EDZ35996.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp.
           enterica serovar Hadar str. RI_05P066]
 gi|312913557|dbj|BAJ37531.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp.
           enterica serovar Typhimurium str. T000240]
 gi|321222726|gb|EFX47797.1| tRNA-specific adenosine-34 deaminase [Salmonella enterica subsp.
           enterica serovar Typhimurium str. TN061786]
          Length = 172

 Score =  223 bits (569), Expect = 8e-57,   Method: Composition-based stats.
 Identities = 56/147 (38%), Positives = 77/147 (52%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
               +M  AL  A+ A    E+PVGAV V N+++I    NR     D TAHAEI+A+R G
Sbjct: 7   DHEYWMRHALTLAKRAWDEREVPVGAVLVHNHRVIGEGWNRPIGRHDPTAHAEIMALRQG 66

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
             +L    L +  LYVTLEPC MCA A+  +RI R+ +GA + K G   +          
Sbjct: 67  GLVLQNYRLLDTTLYVTLEPCVMCAGAMVHSRIGRVVFGARDAKTGAAGSLIDVLHHPGM 126

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H  EI  G+       ++ DFF+ RR
Sbjct: 127 NHRVEIIEGVLRDECATLLSDFFRMRR 153


>gi|290891900|ref|ZP_06554897.1| cytidine/deoxycytidylate deaminase [Listeria monocytogenes FSL
           J2-071]
 gi|290558494|gb|EFD92011.1| cytidine/deoxycytidylate deaminase [Listeria monocytogenes FSL
           J2-071]
          Length = 156

 Score =  222 bits (568), Expect = 9e-57,   Method: Composition-based stats.
 Identities = 58/144 (40%), Positives = 86/144 (59%)

Query: 6   VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
            FM  ALEEA+ A    E+P+GAV VL+ +II RA N     ++   HAE+LAI+  C+ 
Sbjct: 5   FFMQQALEEAEKAREIGEVPIGAVVVLDGEIIGRAHNLRETSQNAVTHAELLAIQDACKH 64

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
            +   L   +LYVTLEPC MC+ AI L+RI ++YYGA +PK G   +          +H+
Sbjct: 65  QNSWRLSGAELYVTLEPCPMCSGAILLSRIEKVYYGAKDPKAGTAGSLMNLLQDDRFNHT 124

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
            E+  G+ E+ S ++++ FF+  R
Sbjct: 125 CEVEAGLMEKESSEMLKSFFQNLR 148


>gi|78224707|ref|YP_386454.1| tRNA-adenosine deaminase [Geobacter metallireducens GS-15]
 gi|78195962|gb|ABB33729.1| tRNA-adenosine deaminase [Geobacter metallireducens GS-15]
          Length = 171

 Score =  222 bits (568), Expect = 9e-57,   Method: Composition-based stats.
 Identities = 57/148 (38%), Positives = 79/148 (53%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           +  + +M  AL EA+ AA R+E+P+GAV V N  +I R  N     +D +AHAE++AIR 
Sbjct: 10  RDDSYWMGKALREAEKAAARDEVPIGAVVVRNGAVIGRGHNLRENKQDPSAHAEMIAIRQ 69

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
             R L    L    LYVTLEPC MC  AI LAR  R+ +G  +PKGG   +         
Sbjct: 70  AARRLGCWRLTGCVLYVTLEPCLMCMGAIILARFDRVVFGCHDPKGGAAGSLYDLSDDRR 129

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H  E+   + E+    I+  FF + R
Sbjct: 130 LNHRVELTSRVREEECSAILSGFFADLR 157


>gi|169830233|ref|YP_001716215.1| CMP/dCMP deaminase [Candidatus Desulforudis audaxviator MP104C]
 gi|169637077|gb|ACA58583.1| CMP/dCMP deaminase, zinc-binding [Candidatus Desulforudis
           audaxviator MP104C]
          Length = 156

 Score =  222 bits (568), Expect = 9e-57,   Method: Composition-based stats.
 Identities = 55/146 (37%), Positives = 80/146 (54%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
              +M  AL EA+ A  + E+PVGAV V +  II R  N      D +AHAE+LA+R   
Sbjct: 10  HAGYMREALREAEKAYAKGEVPVGAVVVQDGTIIGRGHNLREADNDASAHAELLAMRQAA 69

Query: 64  RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123
           ++     L    +YVT+EPC MCA A+   R+RR+ YG ++PK G   +  +       +
Sbjct: 70  QVSGDWRLSGATVYVTMEPCPMCAGALVQFRVRRVVYGTADPKAGAAGSVVELLREPRFN 129

Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149
           H  E+ PG+ E   R+I+Q FF+  R
Sbjct: 130 HQVEVIPGVLEAECREIVQRFFRALR 155


>gi|146319707|ref|YP_001199419.1| cytosine/adenosine deaminase [Streptococcus suis 05ZYH33]
 gi|253752698|ref|YP_003025839.1| deaminase [Streptococcus suis SC84]
 gi|253754524|ref|YP_003027665.1| deaminase [Streptococcus suis P1/7]
 gi|253756457|ref|YP_003029597.1| deaminase [Streptococcus suis BM407]
 gi|145690513|gb|ABP91019.1| Cytosine/adenosine deaminase [Streptococcus suis 05ZYH33]
 gi|251816987|emb|CAZ52636.1| putative deaminase [Streptococcus suis SC84]
 gi|251818921|emb|CAZ56764.1| putative deaminase [Streptococcus suis BM407]
 gi|251820770|emb|CAR47532.1| putative deaminase [Streptococcus suis P1/7]
 gi|292559319|gb|ADE32320.1| Cytosine/adenosine deaminase [Streptococcus suis GZ1]
 gi|319759114|gb|ADV71056.1| cytosine/adenosine deaminase [Streptococcus suis JS14]
          Length = 173

 Score =  222 bits (568), Expect = 9e-57,   Method: Composition-based stats.
 Identities = 56/148 (37%), Positives = 85/148 (57%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           ++   FM+ AL+EA+ +  ++EIP+G V V + +II R  N   EL     HAE++AI+ 
Sbjct: 6   EEKEYFMTQALQEARKSLEKDEIPIGCVIVKDGQIIGRGHNAREELNQAIMHAEVMAIQE 65

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
              +     L +  L+VT+EPC MC+ AI LARI ++ YGA+N K G   +     T   
Sbjct: 66  ANNVEGNWRLLDSTLFVTIEPCVMCSGAIGLARIPQVIYGATNKKFGAAGSLYDILTDER 125

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H  ++  GI E     I+QDFF++RR
Sbjct: 126 LNHRVKVETGILEAECANIMQDFFRQRR 153


>gi|291562950|emb|CBL41766.1| Cytosine/adenosine deaminases [butyrate-producing bacterium SS3/4]
          Length = 186

 Score =  222 bits (568), Expect = 9e-57,   Method: Composition-based stats.
 Identities = 59/149 (39%), Positives = 80/149 (53%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M     +M  A+ +A+ AA   E+P+G V V + +II+R  NR    K+V AHAEI+A+R
Sbjct: 10  MTIEEHYMKEAIRQAKKAAALKEVPIGCVIVYDGRIIARGYNRRTVDKNVLAHAEIIAMR 69

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
             CRIL    L    +YVTLEPC MCA AI  ARI ++  G  NPK G   +        
Sbjct: 70  RACRILGDWRLEGCTMYVTLEPCPMCAGAIVQARIPKVVIGCMNPKAGCAGSVLDMLHED 129

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  E   G+      Q+++DFFK  R
Sbjct: 130 GFNHQVETEVGLLGDECSQMLKDFFKALR 158


>gi|217966083|ref|YP_002351761.1| tRNA-specific adenosine deaminase [Listeria monocytogenes HCC23]
 gi|217335353|gb|ACK41147.1| tRNA-specific adenosine deaminase [Listeria monocytogenes HCC23]
 gi|307572307|emb|CAR85486.1| tRNA-specific adenosine deaminase, putative [Listeria monocytogenes
           L99]
          Length = 156

 Score =  222 bits (568), Expect = 9e-57,   Method: Composition-based stats.
 Identities = 58/144 (40%), Positives = 87/144 (60%)

Query: 6   VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
            FM  ALEEA+ A    E+P+GAV VL+ +II RA N     ++   HAE+LAI+  C+ 
Sbjct: 5   FFMQQALEEAEKAREIGEVPIGAVVVLDGEIIGRAHNLRETSQNAVTHAELLAIQDACKH 64

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
            +   L   +LYVTLEPC MC+ AI L+RI ++YYGA +PK G   +          +H+
Sbjct: 65  QNSWRLSGAELYVTLEPCPMCSGAILLSRIEKVYYGAKDPKAGTAGSLMNLLQDDRFNHT 124

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
            E+  G+ E+ S ++++ FF++ R
Sbjct: 125 CEVEAGLMEKESSEMLKSFFQDLR 148


>gi|152971415|ref|YP_001336524.1| tRNA-specific adenosine deaminase [Klebsiella pneumoniae subsp.
           pneumoniae MGH 78578]
 gi|150956264|gb|ABR78294.1| tRNA-specific adenosine deaminase [Klebsiella pneumoniae subsp.
           pneumoniae MGH 78578]
          Length = 172

 Score =  222 bits (568), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 58/147 (39%), Positives = 78/147 (53%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
               +M  AL  A+ A    E+PVGAV V NN++I    NR     D TAHAEI+A+R G
Sbjct: 10  NDEYWMRHALTLAKRAWEEGEVPVGAVLVHNNQVIGEGWNRPIGRHDPTAHAEIMALRQG 69

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
             +L    L +  LYVTLEPC MCA A+  +RI RL +GA + K G   +          
Sbjct: 70  GLVLQNYRLIDATLYVTLEPCVMCAGAMVHSRIARLVFGARDAKTGAAGSLMDVLHHPGM 129

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H  EI  G+  +    ++ DFF+ RR
Sbjct: 130 NHRVEISEGVLAESCSAMLSDFFRWRR 156


>gi|304558173|gb|ADM40837.1| tRNA-specific adenosine-34 deaminase [Edwardsiella tarda FL6-60]
          Length = 170

 Score =  222 bits (568), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 59/148 (39%), Positives = 83/148 (56%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           +  + +M  AL+ A+ A  + E+PVGAV VLN+++I    NR     D TAHAEI+A++ 
Sbjct: 4   RDDSDWMRHALQLAEKARAQGEVPVGAVLVLNDRVIGEGWNRPITRHDPTAHAEIMALQQ 63

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
           G  I+    L E  LYVTLEPC MCA A+  +RIRRL YGA + K G   +         
Sbjct: 64  GGAIMQNYRLLEATLYVTLEPCVMCAGAMVHSRIRRLVYGAPDLKTGAAGSLLDVLGHPG 123

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H  E+  G+        + DFF++RR
Sbjct: 124 MNHRIEVCGGVLADACAAQLSDFFRQRR 151


>gi|295702259|ref|YP_003595334.1| tRNA-specific adenosine deaminase [Bacillus megaterium DSM 319]
 gi|294799918|gb|ADF36984.1| tRNA-specific adenosine deaminase [Bacillus megaterium DSM 319]
          Length = 156

 Score =  222 bits (568), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 55/149 (36%), Positives = 83/149 (55%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M     +M  A++EA  A  + E+P+GAV V N+++++ A N     +   AHAE+LAI 
Sbjct: 1   MLNDEKYMRLAIDEALKAKDKLEVPIGAVIVQNDEVVASAYNLRETEQRSVAHAELLAID 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
             C+ L    L +  LYVTLEPC MCA AI L+R++R+ +GA +PKGG            
Sbjct: 61  EACKKLRTWRLEDATLYVTLEPCPMCAGAIVLSRVKRVVFGAYDPKGGCAGTLLNLLKFE 120

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  E+  G+ E+    ++  FF+E R
Sbjct: 121 KFNHQAEVVGGMLEEECGSLLTTFFRELR 149


>gi|255023462|ref|ZP_05295448.1| tRNA-specific adenosine deaminase [Listeria monocytogenes FSL
           J1-208]
          Length = 156

 Score =  222 bits (568), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 58/144 (40%), Positives = 88/144 (61%)

Query: 6   VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
            FM  ALEEA+ A    E+P+GAV VL+ +II RA N     ++   HAE+LAI+  C+ 
Sbjct: 5   FFMQQALEEAEKAREIGEVPIGAVVVLDGEIIGRAHNLRETSQNAVTHAELLAIQDACKH 64

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
            +   L   +LYVTLEPC MC+ AI L+RI ++YYGA +PK G   +          +H+
Sbjct: 65  QNSWRLSGAELYVTLEPCPMCSGAILLSRIEKVYYGAKDPKAGTAGSLMNLLQDDRFNHT 124

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
            E+  G+ E+ S +++++FF++ R
Sbjct: 125 CEVEAGLMEKESSEMLKNFFQDLR 148


>gi|224498434|ref|ZP_03666783.1| hypothetical protein LmonF1_01565 [Listeria monocytogenes Finland
           1988]
          Length = 156

 Score =  222 bits (568), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 59/144 (40%), Positives = 86/144 (59%)

Query: 6   VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
            FM  ALEEA+ A    E+P+GAV VL+ +II RA N     ++   HAE+LAI+  C+ 
Sbjct: 5   FFMQQALEEAEKARDIGEVPIGAVVVLDGEIIGRAHNLRETSQNAVTHAELLAIQDACKH 64

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
            +   L   +LYVTLEPC MC+ AI L+RI ++YYGA +PK G   +          +H+
Sbjct: 65  QNSWRLSGAELYVTLEPCPMCSGAILLSRIEKVYYGAKDPKAGTAGSLMNLLQDDRFNHT 124

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
            E+  G+ E  S ++++ FF+E R
Sbjct: 125 CEVEAGLMESESSEMLKSFFQELR 148


>gi|194469725|ref|ZP_03075709.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp.
           enterica serovar Kentucky str. CVM29188]
 gi|197248207|ref|YP_002147526.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp.
           enterica serovar Agona str. SL483]
 gi|200387835|ref|ZP_03214447.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp.
           enterica serovar Virchow str. SL491]
 gi|205358526|ref|ZP_02657204.2| tRNA-specific adenosine deaminase [Salmonella enterica subsp.
           enterica serovar Kentucky str. CDC 191]
 gi|205359943|ref|ZP_02833442.2| tRNA-specific adenosine deaminase [Salmonella enterica subsp.
           enterica serovar Weltevreden str. HI_N05-537]
 gi|194456089|gb|EDX44928.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp.
           enterica serovar Kentucky str. CVM29188]
 gi|197211910|gb|ACH49307.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp.
           enterica serovar Agona str. SL483]
 gi|199604933|gb|EDZ03478.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp.
           enterica serovar Virchow str. SL491]
 gi|205333662|gb|EDZ20426.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp.
           enterica serovar Kentucky str. CDC 191]
 gi|205341963|gb|EDZ28727.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp.
           enterica serovar Weltevreden str. HI_N05-537]
          Length = 172

 Score =  222 bits (568), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 55/147 (37%), Positives = 77/147 (52%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
               +M  AL  A+ A    E+PVGAV V N+++I    NR     D TAHAEI+A+R G
Sbjct: 7   DHEYWMRHALTLAKRAWDEREVPVGAVLVHNHRVIGEGWNRPIGRHDPTAHAEIMALRQG 66

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
             +L    L +  LYVTLEPC MCA A+  +RI R+ +GA + K G   +          
Sbjct: 67  GLVLQNYRLLDTTLYVTLEPCVMCAGAMVHSRIGRVVFGARDAKTGAAGSLIDVLHHPGM 126

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H  +I  G+       ++ DFF+ RR
Sbjct: 127 NHRVDIIEGVLRDECATLLSDFFRMRR 153


>gi|281179608|dbj|BAI55938.1| putative deaminase [Escherichia coli SE15]
          Length = 178

 Score =  222 bits (568), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 56/145 (38%), Positives = 77/145 (53%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
             +M  A+  A+ A    E+PVGAV V NN++I    NR     D TAHAEI+A+R G  
Sbjct: 20  EYWMRHAMTLAKRAWDEREVPVGAVLVHNNRVIGEGWNRPIGRHDPTAHAEIMALRQGGL 79

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
           ++    L +  LYVTLEPC MCA A+  +RI R+ +GA + K G   +          +H
Sbjct: 80  VMQNYRLIDATLYVTLEPCVMCAGAMIHSRIGRVVFGARDAKTGAAGSLMDVLHHPGMNH 139

Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149
             EI  GI       ++ DFF+ RR
Sbjct: 140 RVEITEGILADECAALLSDFFRMRR 164


>gi|126175184|ref|YP_001051333.1| CMP/dCMP deaminase zinc-binding [Shewanella baltica OS155]
 gi|125998389|gb|ABN62464.1| tRNA-adenosine deaminase [Shewanella baltica OS155]
          Length = 175

 Score =  222 bits (568), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 50/148 (33%), Positives = 74/148 (50%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           ++   +M  A+  A+ A    E+PVGAV V + + I+   N +    D +AHAEIL +R 
Sbjct: 11  EQDEQWMQVAMLMAEKAEAEGEVPVGAVLVKDGQQIATGYNLSISQHDPSAHAEILCLRE 70

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
             R++    L +  LYVTLEPC MCA A+  +RI R+ +GA + K G             
Sbjct: 71  AGRLVENYRLLDATLYVTLEPCAMCAGAMVHSRIARVVFGARDEKTGAAGTVVNLLQHPA 130

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H  E+  G+        +  FFK RR
Sbjct: 131 FNHQVEVTSGVLADACSAQLSRFFKRRR 158


>gi|284046792|ref|YP_003397132.1| CMP/dCMP deaminase zinc-binding protein [Conexibacter woesei DSM
           14684]
 gi|283951013|gb|ADB53757.1| CMP/dCMP deaminase zinc-binding protein [Conexibacter woesei DSM
           14684]
          Length = 154

 Score =  222 bits (568), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 51/147 (34%), Positives = 77/147 (52%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
           +   +M  A+ EA  A   +++PVGAV V + ++++   N     +D TAHAE +A+R  
Sbjct: 8   RDEYYMRLAMREADRALEHDDVPVGAVVVHDGEVVATGHNERELRQDPTAHAEAIALREA 67

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
            R L    + +  LYVTLEPC MCA AI LAR+ R+ +G  +PK G   +          
Sbjct: 68  ARHLGSWRVLDTVLYVTLEPCAMCAGAIVLARVPRVVFGTWDPKAGAAGSVLDVLDQPQL 127

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H PE+  G+        ++ FF  RR
Sbjct: 128 NHRPEVDGGLLADECAAQLRAFFASRR 154


>gi|147676360|ref|YP_001210575.1| cytosine/adenosine deaminases [Pelotomaculum thermopropionicum SI]
 gi|146272457|dbj|BAF58206.1| cytosine/adenosine deaminases [Pelotomaculum thermopropionicum SI]
          Length = 156

 Score =  222 bits (567), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 63/147 (42%), Positives = 81/147 (55%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
               +M  AL EA+ A    E+PVGAV V + +II R  N    LKD TAHAEILA+R  
Sbjct: 5   NHAGYMREALAEAKKAYGLGEVPVGAVVVRDGEIIGRGHNLRETLKDSTAHAEILAMREA 64

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
            RI+    L    LY T+EPC MCA AI   R+  L YGA++PK G   +          
Sbjct: 65  ARIVGDWRLNGTVLYSTIEPCAMCAGAIIQFRVATLVYGAADPKAGAAGSVIDVIGQPRF 124

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H  E+  G+ E+  R+IIQ FF+E R
Sbjct: 125 NHRVEVVSGVLEEECREIIQKFFRELR 151


>gi|194445660|ref|YP_002041831.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp.
           enterica serovar Newport str. SL254]
 gi|194404323|gb|ACF64545.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp.
           enterica serovar Newport str. SL254]
          Length = 172

 Score =  222 bits (567), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 56/147 (38%), Positives = 77/147 (52%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
               +M  AL  A+ A    E+PVGAV V N+++I    NR     D TAHAEI+A+R G
Sbjct: 7   DHEYWMRHALTLAKRAWDEREVPVGAVLVHNHRVIGEGWNRPIGRHDPTAHAEIMALRQG 66

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
             +L    L +  LYVTLEPC MCA A+  +RI R+ +GA + K G   +          
Sbjct: 67  GLVLQNYRLLDTTLYVTLEPCVMCAGAMVHSRIGRVVFGARDAKTGAAGSLIDVLHHPGM 126

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H  EI  G+       ++ DFF+ RR
Sbjct: 127 NHRVEIIEGVLRDECATLLSDFFRMRR 153


>gi|321313686|ref|YP_004205973.1| tRNA specific adenosine deaminase [Bacillus subtilis BSn5]
 gi|320019960|gb|ADV94946.1| tRNA specific adenosine deaminase [Bacillus subtilis BSn5]
          Length = 161

 Score =  222 bits (567), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 53/148 (35%), Positives = 84/148 (56%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M +  ++M  A++EA+ A  + E+P+GAV V+N++II+RA N     +   AHAE+L + 
Sbjct: 1   MTQDELYMKEAIKEAKKAEEKGEVPIGAVLVVNDEIIARAHNLRETEQRSIAHAEMLVMD 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
             C+ L    L    LYVTLEPC MCA A+ L+R+ ++ +GA +PKGG            
Sbjct: 61  EACKALGTWRLEGATLYVTLEPCPMCAGAVVLSRVEKVVFGAFDPKGGCSGTLMNLLQEE 120

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKER 148
             +H  E+  G+ E+    ++  FF+E 
Sbjct: 121 RFNHQAEVVSGVLEEECGGMLSAFFREL 148


>gi|54307981|ref|YP_129001.1| putative cytosine/adenosine deaminase [Photobacterium profundum
           SS9]
 gi|46912407|emb|CAG19199.1| Putative cytosine/adenosine deaminase [Photobacterium profundum
           SS9]
          Length = 171

 Score =  222 bits (567), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 52/146 (35%), Positives = 80/146 (54%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
              +M  A+E A  A    E+PVGAV V N +++    NR+    D TAHAE++A+R   
Sbjct: 10  DEQYMRRAIELASQAEAEGEVPVGAVVVYNGQVVGEGWNRSIGQHDATAHAEMMALRQAG 69

Query: 64  RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123
           +++    L +  LYVTLEPC MCA A+  +RI ++ +GAS+ K G   +     +    +
Sbjct: 70  KVVQNYRLLDATLYVTLEPCPMCAGAMVHSRIGKVIFGASDLKTGAAGSVMNLLSYDEVN 129

Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149
           H  +   G+ ++  R  +Q FFK RR
Sbjct: 130 HHVDCQSGVLDEECRAQLQAFFKRRR 155


>gi|292489080|ref|YP_003531967.1| tRNA-specific adenosine deaminase [Erwinia amylovora CFBP1430]
 gi|291554514|emb|CBA22074.1| tRNA-specific adenosine deaminase [Erwinia amylovora CFBP1430]
          Length = 159

 Score =  222 bits (567), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 55/147 (37%), Positives = 78/147 (53%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
               +M  AL  A+ A    E+PVGAV VL+N++I    NR     D TAHAE++A+R G
Sbjct: 5   NDEYWMRHALRLARRAWDEGEVPVGAVLVLDNQVIGEGWNRPIGHHDPTAHAEMMALRQG 64

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
            +++    L +  LYVTLEPC MCA A+  +RI RL YGA + K G   +          
Sbjct: 65  GKMIENYRLLDTTLYVTLEPCVMCAGAMIHSRIGRLVYGARDAKTGAAGSLLDVLGHPGM 124

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H      G+       ++ DFF++RR
Sbjct: 125 NHQVPAECGLLNDECAAMLSDFFRQRR 151


>gi|322620458|gb|EFY17323.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-1]
 gi|322625074|gb|EFY21903.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-3]
 gi|322629482|gb|EFY26258.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-4]
 gi|322639849|gb|EFY36528.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 531954]
 gi|322644265|gb|EFY40809.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp.
           enterica serovar Montevideo str. NC_MB110209-0054]
 gi|322649957|gb|EFY46377.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp.
           enterica serovar Montevideo str. OH_2009072675]
 gi|322658212|gb|EFY54478.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 19N]
 gi|323200394|gb|EFZ85475.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 556150-1]
 gi|323201294|gb|EFZ86361.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 609460]
 gi|323208364|gb|EFZ93304.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 507440-20]
 gi|323221772|gb|EGA06180.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB102109-0047]
 gi|323245221|gb|EGA29222.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 315731156]
 gi|323248795|gb|EGA32722.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2009159199]
 gi|323259073|gb|EGA42721.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008283]
 gi|323261995|gb|EGA45560.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008284]
 gi|323267779|gb|EGA51260.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008285]
          Length = 172

 Score =  222 bits (567), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 56/147 (38%), Positives = 77/147 (52%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
               +M  AL  A+ A    E+PVGAV V N+++I    NR     D TAHAEI+A+R G
Sbjct: 7   DHEYWMRHALTLAKRAWDEREVPVGAVLVHNHRVIGEGWNRPIGRHDPTAHAEIMALRQG 66

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
             +L    L +  LYVTLEPC MCA AI  +RI R+ +GA + K G   +          
Sbjct: 67  GLVLQNYRLLDTTLYVTLEPCVMCAGAIVHSRIGRVVFGARDAKTGAAGSLIDVLHHPGM 126

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H  +I  G+       ++ DFF+ RR
Sbjct: 127 NHRVDIIEGVLRDECATLLSDFFRMRR 153


>gi|283796876|ref|ZP_06346029.1| tRNA-specific adenosine deaminase [Clostridium sp. M62/1]
 gi|291075284|gb|EFE12648.1| tRNA-specific adenosine deaminase [Clostridium sp. M62/1]
          Length = 215

 Score =  222 bits (567), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 57/149 (38%), Positives = 78/149 (52%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           + +   +M  A+ +A+ A    E+P+G V V   KII R  NR     +V AHAEILAIR
Sbjct: 40  LTEDERYMREAVRQAKKAWALGEVPIGCVIVHRGKIIGRGYNRRTTDGNVLAHAEILAIR 99

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
             CRI+    L E  +YVTLEPC MCA AI  ARI ++  G  NPK G   +        
Sbjct: 100 KACRIIGDWRLEECTMYVTLEPCPMCAGAIVQARIPKVVIGCMNPKAGCAGSVLDLLHEE 159

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  E   G   +    ++++FF+E R
Sbjct: 160 GFNHQAETEVGTLGEECSSMLKEFFRELR 188


>gi|194468109|ref|ZP_03074095.1| CMP/dCMP deaminase zinc-binding [Lactobacillus reuteri 100-23]
 gi|194452962|gb|EDX41860.1| CMP/dCMP deaminase zinc-binding [Lactobacillus reuteri 100-23]
          Length = 170

 Score =  222 bits (567), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 59/152 (38%), Positives = 90/152 (59%), Gaps = 7/152 (4%)

Query: 1   MKKGN-------VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAH 53
           MKK N        FM  A+ EA+ A + +E+P+GA+ V + ++I    N   + +DVT H
Sbjct: 1   MKKNNSSLSEQQKFMKMAIAEAKQARILDEVPIGAIVVHDGQVIGCGHNMREKFQDVTYH 60

Query: 54  AEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENG 113
           AE+LAI   C  L    L + DLYVTLEPC MC+ AI  ARI+ +YYGA++PK G +++ 
Sbjct: 61  AEMLAIMEACTNLESWRLEDCDLYVTLEPCIMCSGAIINARIKNVYYGATDPKAGAVDSL 120

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
               + +  +H   ++ GI E    Q++++FF
Sbjct: 121 YHLLSDSRLNHQVNVHSGILEDECSQMLKNFF 152


>gi|288934060|ref|YP_003438119.1| CMP/dCMP deaminase zinc-binding protein [Klebsiella variicola
           At-22]
 gi|288888789|gb|ADC57107.1| CMP/dCMP deaminase zinc-binding protein [Klebsiella variicola
           At-22]
          Length = 169

 Score =  222 bits (567), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 57/147 (38%), Positives = 77/147 (52%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
               +M  AL  A+ A    E+PVGAV V NN++I    NR     D TAHAEI+A+R G
Sbjct: 7   NDEYWMRHALTLAKRAWEEGEVPVGAVLVYNNQVIGEGWNRPIGRHDPTAHAEIMALRQG 66

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
             +     L +  LYVTLEPC MCA A+  +RI RL +GA + K G   +          
Sbjct: 67  GLVQQNYRLIDATLYVTLEPCVMCAGAMVHSRIARLVFGARDAKTGAAGSLIDVLHHPGM 126

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H  EI  G+  +    ++ DFF+ RR
Sbjct: 127 NHRVEISEGVLAESCSTMLSDFFRWRR 153


>gi|161612662|ref|YP_001586627.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|161362026|gb|ABX65794.1| hypothetical protein SPAB_00358 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
          Length = 172

 Score =  222 bits (567), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 56/147 (38%), Positives = 77/147 (52%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
               +M  AL  A+ A    E+PVGAV V N+++I    NR     D TAHAEI+A+R G
Sbjct: 7   DHEYWMRHALTLAKRAWDEREVPVGAVLVHNHRVIGEGWNRPIGRHDPTAHAEIMALRQG 66

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
             +L    L +  LYVTLEPC MCA A+  +RI R+ +GA + K G   +          
Sbjct: 67  GLVLQNYRLLDTTLYVTLEPCVMCAGAMVHSRIGRVVFGARDAKTGAAGSLIDVLHHPGM 126

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H  EI  G+       ++ DFF+ RR
Sbjct: 127 NHRVEIIEGVLRDECATLLSDFFRMRR 153


>gi|254830845|ref|ZP_05235500.1| hypothetical protein Lmon1_05774 [Listeria monocytogenes 10403S]
          Length = 156

 Score =  222 bits (567), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 59/144 (40%), Positives = 86/144 (59%)

Query: 6   VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
            FM  ALEEA+ A    E+P+GAV VL+ +II RA N     ++   HAE+LAI+  C+ 
Sbjct: 5   FFMQQALEEAEKARDIGEVPIGAVVVLDGEIIGRAHNLRETSQNAVTHAELLAIQDACKH 64

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
            +   L   +LYVTLEPC MC+ AI L+RI ++YYGA +PK G   +          +H+
Sbjct: 65  QNSWRLSGAELYVTLEPCPMCSGAILLSRIEKVYYGAKDPKAGTAGSLMNLLQDDRFNHT 124

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
            E+  G+ E  S ++++ FF+E R
Sbjct: 125 CEVEAGLMESESSEMLKSFFQELR 148


>gi|322834117|ref|YP_004214144.1| CMP/dCMP deaminase zinc-binding protein [Rahnella sp. Y9602]
 gi|321169318|gb|ADW75017.1| CMP/dCMP deaminase zinc-binding protein [Rahnella sp. Y9602]
          Length = 180

 Score =  222 bits (567), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 57/149 (38%), Positives = 79/149 (53%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M     +M  A+  A  A    E+PVGAV VL+N++I    NR+    D TAHAEI+A+R
Sbjct: 9   MNDDEHWMRQAMNLALKAQDEGEVPVGAVLVLDNQVIGEGWNRSIGHHDPTAHAEIMALR 68

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
            G   +    L    LYVTLEPC MCA A+  +RIRR+ YGA++ K G   +        
Sbjct: 69  QGGNAVQNYRLLNATLYVTLEPCVMCAGAMIHSRIRRVVYGAADAKTGAAGSLLDVLRHP 128

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  EI  G+  +   + +  FF+ RR
Sbjct: 129 GMNHQVEITAGVLAEACSEQLSAFFRFRR 157


>gi|319427113|gb|ADV55187.1| CMP/dCMP deaminase zinc-binding protein [Shewanella putrefaciens
           200]
          Length = 169

 Score =  222 bits (567), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 51/152 (33%), Positives = 76/152 (50%), Gaps = 3/152 (1%)

Query: 1   MKK---GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57
           M++      +M  A++ A+ A    E+PVGAV V + + I+   N +    D +AHAEIL
Sbjct: 1   MEQTELDEYWMQVAMQMAEKAEAAGEVPVGAVLVKDGQQIATGYNLSISQHDPSAHAEIL 60

Query: 58  AIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFY 117
            +R   + L    L +  LY+TLEPC MCA A+  +RI R+ YGA + K G         
Sbjct: 61  CLRSAGKKLENYRLLDATLYITLEPCAMCAGAMVHSRIARVVYGARDEKTGAAGTVVNLL 120

Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
                +H  E+  G+  +     +  FFK RR
Sbjct: 121 QHPAFNHQVEVTSGVLAEACSAQLSRFFKRRR 152


>gi|292900205|ref|YP_003539574.1| tRNA-specific adenosine deaminase [Erwinia amylovora ATCC 49946]
 gi|291200053|emb|CBJ47178.1| tRNA-specific adenosine deaminase [Erwinia amylovora ATCC 49946]
          Length = 164

 Score =  222 bits (567), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 55/147 (37%), Positives = 78/147 (53%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
               +M  AL  A+ A    E+PVGAV VL+N++I    NR     D TAHAE++A+R G
Sbjct: 10  NDEYWMRHALRLARRAWDEGEVPVGAVLVLDNQVIGEGWNRPIGHHDPTAHAEMMALRQG 69

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
            +++    L +  LYVTLEPC MCA A+  +RI RL YGA + K G   +          
Sbjct: 70  GKMIENYRLLDTTLYVTLEPCVMCAGAMIHSRIGRLVYGARDAKTGAAGSLLDVLGHPGM 129

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H      G+       ++ DFF++RR
Sbjct: 130 NHQVPAECGLLNDECAAMLSDFFRQRR 156


>gi|315284032|ref|ZP_07872011.1| tRNA-specific adenosine deaminase [Listeria marthii FSL S4-120]
 gi|313612324|gb|EFR86487.1| tRNA-specific adenosine deaminase [Listeria marthii FSL S4-120]
          Length = 156

 Score =  222 bits (567), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 59/144 (40%), Positives = 86/144 (59%)

Query: 6   VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
            FM  ALEEA+ A    E+P+GAV VL+ +II RA N     ++   HAE+LAI+  C+ 
Sbjct: 5   FFMQQALEEAEKAREIGEVPIGAVVVLDGEIIGRAHNLRETSQNAVTHAELLAIQDACKH 64

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
            +   L   +LYVTLEPC MC+ AI L+RI ++YYGA +PK G   +          +H+
Sbjct: 65  QNSWRLSGAELYVTLEPCPMCSGAILLSRIEKVYYGAKDPKAGTAGSLMNLLQDDRFNHT 124

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
            E+  G+ E  S ++++ FF+E R
Sbjct: 125 CEVEAGLMEAESSEMLKSFFQELR 148


>gi|228478058|ref|ZP_04062669.1| tRNA-specific adenosine deaminase [Streptococcus salivarius SK126]
 gi|228250238|gb|EEK09491.1| tRNA-specific adenosine deaminase [Streptococcus salivarius SK126]
          Length = 172

 Score =  222 bits (567), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 56/148 (37%), Positives = 87/148 (58%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           ++ + FMS AL+EA+ +  + EIP+G V V + +++ R  N   EL     HAE++AI+ 
Sbjct: 7   EEKDFFMSEALKEAEKSLDKAEIPIGCVIVKDGEVVGRGHNAREELNQAIMHAEVMAIQE 66

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
             R +    L +  L+VT+EPC MC+ AI LARI ++ YGASN K GG  +         
Sbjct: 67  ANRTVGNWRLLDCTLFVTIEPCVMCSGAIGLARIPKVIYGASNQKFGGAGSLYDILRDER 126

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H  E+  G+ E+   +I+QDFF++ R
Sbjct: 127 LNHRVEVETGVMEEECAKIMQDFFRQSR 154


>gi|91201429|emb|CAJ74489.1| conserved hypothetical protein [Candidatus Kuenenia
           stuttgartiensis]
          Length = 158

 Score =  222 bits (567), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 61/144 (42%), Positives = 81/144 (56%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
                FM  A++EA+ AA  NE+PVGAV V +N+II+RA N+   LKD TAHAE++AI  
Sbjct: 8   SNHEYFMRQAIKEAEKAADINEVPVGAVIVYDNRIIARAHNQREMLKDPTAHAEMIAITQ 67

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
           G   L    L    +YVTLEPC MCA A+  +RI +L YGA + K G   +         
Sbjct: 68  GAEYLQNWRLTGSTIYVTLEPCVMCAGALVQSRIDKLVYGAVDKKAGACVSVMNLVQNTK 127

Query: 122 CHHSPEIYPGISEQRSRQIIQDFF 145
            +H  E+ P I     R I++ FF
Sbjct: 128 LNHRLEVIPDILADECRDILKRFF 151


>gi|238896010|ref|YP_002920746.1| tRNA-specific adenosine deaminase [Klebsiella pneumoniae
           NTUH-K2044]
 gi|238548328|dbj|BAH64679.1| tRNA-specific adenosine deaminase [Klebsiella pneumoniae subsp.
           pneumoniae NTUH-K2044]
          Length = 180

 Score =  222 bits (567), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 58/147 (39%), Positives = 78/147 (53%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
               +M  AL  A+ A    E+PVGAV V NN++I    NR     D TAHAEI+A+R G
Sbjct: 18  NDEYWMRHALTLAKRAWEEGEVPVGAVLVHNNQVIGEGWNRPIGRHDPTAHAEIMALRQG 77

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
             +L    L +  LYVTLEPC MCA A+  +RI RL +GA + K G   +          
Sbjct: 78  GLVLQNYRLIDATLYVTLEPCVMCAGAMVHSRIARLVFGARDAKTGAAGSLMDVLHHPGM 137

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H  EI  G+  +    ++ DFF+ RR
Sbjct: 138 NHRVEISEGVLAESCSAMLSDFFRWRR 164


>gi|163802511|ref|ZP_02196404.1| molecular chaperone DnaK [Vibrio sp. AND4]
 gi|159173812|gb|EDP58627.1| molecular chaperone DnaK [Vibrio sp. AND4]
          Length = 178

 Score =  222 bits (566), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 57/147 (38%), Positives = 77/147 (52%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
           +   FM  A+E A+ A    E+PVGAV V + KII+   NR+    D TAHAEI  +R  
Sbjct: 9   QDERFMRRAMELAEQAEAEGEVPVGAVLVKDGKIIAEGWNRSICSHDATAHAEIQTLRKA 68

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
              L    L +  LYVTLEPC MCA A+  +R++R+ YGA + K G        +     
Sbjct: 69  GETLGNYRLLDTTLYVTLEPCPMCAGALLHSRVKRVVYGAPDLKAGAAGTVLNLFESQAA 128

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H   +  G+ E   R  +Q FFK RR
Sbjct: 129 YHYATVESGLLENECRTQLQAFFKRRR 155


>gi|293394841|ref|ZP_06639131.1| tRNA-specific adenosine deaminase [Serratia odorifera DSM 4582]
 gi|291422592|gb|EFE95831.1| tRNA-specific adenosine deaminase [Serratia odorifera DSM 4582]
          Length = 179

 Score =  222 bits (566), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 58/147 (39%), Positives = 79/147 (53%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
             + +M  AL  A  A    E+PVGA+ VL+N++I    NR     D TAHAEI+A+R G
Sbjct: 16  NDDYWMRQALTLALRAQEEGEVPVGALLVLDNQVIGEGWNRPIGRHDPTAHAEIMALRQG 75

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
             +L    L    LYVTLEPC MCA A+  +RIRRL YGAS+ K G   +          
Sbjct: 76  GAVLQNYRLLNATLYVTLEPCVMCAGAMVHSRIRRLVYGASDEKTGAAGSLVDILRHPGM 135

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H  +I  G+  +     + +FF+ RR
Sbjct: 136 NHQVDITAGVLAEECAATLSNFFRLRR 162


>gi|88858578|ref|ZP_01133220.1| hypothetical protein PTD2_14349 [Pseudoalteromonas tunicata D2]
 gi|88820195|gb|EAR30008.1| hypothetical protein PTD2_14349 [Pseudoalteromonas tunicata D2]
          Length = 165

 Score =  222 bits (566), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 56/149 (37%), Positives = 80/149 (53%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           MK    +M  AL  A  A    EIPVGA+ V  ++II+   NR+    D +AHAE+LAIR
Sbjct: 1   MKSDEYWMQQALLRADKAEAEGEIPVGAIVVYQDEIIAEGWNRSIISHDPSAHAEMLAIR 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
                L    + +  LYVTLEPC MCA A+  +R++R+ YGA + K G +++       +
Sbjct: 61  NAGIALQNYRMIDCTLYVTLEPCAMCAGALVHSRMKRVVYGADDLKTGAVKSVMNIVQHS 120

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  E+  G+  Q     +  FFK RR
Sbjct: 121 QFNHQLEVTEGVLAQECGLRLSAFFKRRR 149


>gi|330833669|ref|YP_004402494.1| cytosine/adenosine deaminase [Streptococcus suis ST3]
 gi|329307892|gb|AEB82308.1| cytosine/adenosine deaminase [Streptococcus suis ST3]
          Length = 173

 Score =  222 bits (566), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 56/148 (37%), Positives = 85/148 (57%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           ++   FM+ AL+EA+ +  ++EIP+G V V + +II R  N   EL     HAE++AI+ 
Sbjct: 6   EEKEYFMTQALQEARKSLEKDEIPIGCVIVKDGQIIGRGHNAREELNQAIMHAEVMAIQE 65

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
              +     L +  L+VT+EPC MC+ AI LARI ++ YGA+N K G   +     T   
Sbjct: 66  ANNVEGNWRLLDSTLFVTIEPCVMCSGAIGLARIPQVIYGATNKKFGAAGSLYDILTDER 125

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H  ++  GI E     I+QDFF++RR
Sbjct: 126 LNHRVKVETGILEAECANIMQDFFRQRR 153


>gi|313631569|gb|EFR98838.1| tRNA-specific adenosine deaminase [Listeria seeligeri FSL N1-067]
          Length = 156

 Score =  222 bits (566), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 58/144 (40%), Positives = 83/144 (57%)

Query: 6   VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
            FM  AL EA+ A    E+P+GAV VL+ +II RA N     ++   HAE+LAI+  C  
Sbjct: 5   FFMQQALVEAEKAREIGEVPIGAVVVLDGEIIGRAHNLRETSQNAVTHAELLAIQDACNH 64

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
                L   +LYVTLEPC MC+ AI L+RI ++YYGA +PK G   +          +H+
Sbjct: 65  QKSWRLSGAELYVTLEPCPMCSGAILLSRIDKVYYGAKDPKAGTAGSLMNLLQDDRFNHT 124

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
            E+  G+ E  S ++++ FF+E R
Sbjct: 125 CEVESGLMEAESSEMLKSFFQELR 148


>gi|307267454|ref|ZP_07548942.1| CMP/dCMP deaminase zinc-binding [Thermoanaerobacter wiegelii
           Rt8.B1]
 gi|306917535|gb|EFN47821.1| CMP/dCMP deaminase zinc-binding [Thermoanaerobacter wiegelii
           Rt8.B1]
          Length = 148

 Score =  222 bits (566), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 57/145 (39%), Positives = 82/145 (56%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           N FM  A+ EA+ +    E+PVGAV V + +II +  N+     D TAHAEILAI+  C+
Sbjct: 3   NRFMEAAILEAKKSYQLGEVPVGAVIVKDGQIIGKGFNQKESSNDATAHAEILAIKEACK 62

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
            L    L +  +YVTLEPC MCA AI  +RI+R+Y GA + + G           +    
Sbjct: 63  TLGSWRLDDCSMYVTLEPCPMCAGAILESRIKRVYIGAESERTGAAGTVVDILNNSYLGS 122

Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149
             E+Y GI E+  + +++DFF+  R
Sbjct: 123 KTEVYFGIMEEECKTLLKDFFENLR 147


>gi|206578910|ref|YP_002237098.1| tRNA-specific adenosine deaminase [Klebsiella pneumoniae 342]
 gi|206567968|gb|ACI09744.1| tRNA-specific adenosine deaminase [Klebsiella pneumoniae 342]
          Length = 180

 Score =  222 bits (566), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 58/147 (39%), Positives = 78/147 (53%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
               +M  AL  A+ A    E+PVGAV V NN++I    NR     D TAHAEI+A+R G
Sbjct: 18  NDEYWMRHALTLAKRAWKEGEVPVGAVLVYNNQVIGEGWNRPIGRHDPTAHAEIMALRQG 77

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
             +L    L +  LYVTLEPC MCA A+  +RI RL +GA + K G   +          
Sbjct: 78  GLVLQNYRLIDATLYVTLEPCVMCAGAMVHSRIARLVFGARDAKTGAAGSLIDVLHHPGM 137

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H  EI  G+  +    ++ DFF+ RR
Sbjct: 138 NHRVEISEGVLAESCSTMLSDFFRWRR 164


>gi|47092339|ref|ZP_00230130.1| cytidine/deoxycytidylate deaminase family protein [Listeria
           monocytogenes str. 4b H7858]
 gi|226225270|ref|YP_002759377.1| hypothetical protein Lm4b_02693 [Listeria monocytogenes Clip81459]
 gi|254824916|ref|ZP_05229917.1| cytidine/deoxycytidylate deaminase [Listeria monocytogenes FSL
           J1-194]
 gi|255520888|ref|ZP_05388125.1| hypothetical protein LmonocFSL_06656 [Listeria monocytogenes FSL
           J1-175]
 gi|47019318|gb|EAL10060.1| cytidine/deoxycytidylate deaminase family protein [Listeria
           monocytogenes str. 4b H7858]
 gi|225877732|emb|CAS06447.1| Conserved hypothetical proteins [Listeria monocytogenes serotype 4b
           str. CLIP 80459]
 gi|293594156|gb|EFG01917.1| cytidine/deoxycytidylate deaminase [Listeria monocytogenes FSL
           J1-194]
 gi|328468199|gb|EGF39205.1| hypothetical protein LM1816_02662 [Listeria monocytogenes 1816]
          Length = 156

 Score =  222 bits (566), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 58/144 (40%), Positives = 87/144 (60%)

Query: 6   VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
            FM  ALEEA+ A    E+P+GAV VL+ +II RA N     ++   HAE+LAI+  C+ 
Sbjct: 5   FFMQQALEEAEKARDIGEVPIGAVVVLDGEIIGRAHNLRETSQNAVTHAELLAIQDACKH 64

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
            +   L   +LYVTLEPC MC+ AI L+RI ++YYGA +PK G   +          +H+
Sbjct: 65  QNSWRLSGAELYVTLEPCPMCSGAILLSRIEKVYYGAKDPKAGTAGSLMNLLQDDRFNHT 124

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
            E+  G+ E+ S ++++ FF++ R
Sbjct: 125 CEVEAGLMEKESSEMLRSFFQDLR 148


>gi|290508256|ref|ZP_06547627.1| tRNA-specific adenosine deaminase yfhC [Klebsiella sp. 1_1_55]
 gi|289777650|gb|EFD85647.1| tRNA-specific adenosine deaminase yfhC [Klebsiella sp. 1_1_55]
          Length = 180

 Score =  222 bits (566), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 58/147 (39%), Positives = 78/147 (53%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
               +M  AL  A+ A    E+PVGAV V NN++I    NR     D TAHAEI+A+R G
Sbjct: 18  NDEYWMRHALTLAKRAWEEGEVPVGAVLVYNNQVIGEGWNRPIGRHDPTAHAEIMALRQG 77

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
             +L    L +  LYVTLEPC MCA A+  +RI RL +GA + K G   +          
Sbjct: 78  GLVLQNYRLIDATLYVTLEPCVMCAGAMVHSRIARLVFGARDAKTGAAGSLIDVLHHPGM 137

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H  EI  G+  +    ++ DFF+ RR
Sbjct: 138 NHRVEISEGVLAESCSTMLSDFFRWRR 164


>gi|282600107|ref|ZP_05973017.2| tRNA-specific adenosine deaminase [Providencia rustigianii DSM
           4541]
 gi|282566416|gb|EFB71951.1| tRNA-specific adenosine deaminase [Providencia rustigianii DSM
           4541]
          Length = 176

 Score =  222 bits (566), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 56/149 (37%), Positives = 83/149 (55%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           ++    +M+ A+E A+ A    EIPVGA+ V +N++I+   N + E  D TAHAEI+ ++
Sbjct: 13  LEIDEYWMAQAIELAKQAQDIGEIPVGALLVKDNQLIATGWNHSIEQHDPTAHAEIITLQ 72

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              +IL    L +  LYVTLEPC MCA A+  +RI R+ YGA + K G   +       A
Sbjct: 73  QAGKILKNYRLLDTTLYVTLEPCIMCAGAMIHSRIGRVVYGAKDFKTGACGSFINIMGQA 132

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  ++  GI E     ++  FFK RR
Sbjct: 133 GLNHYVDVTGGILEDVCSSMLSAFFKMRR 161


>gi|300214872|gb|ADJ79288.1| Cytosine/adenosine deaminase [Lactobacillus salivarius CECT 5713]
          Length = 166

 Score =  222 bits (566), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 57/144 (39%), Positives = 78/144 (54%)

Query: 6   VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
            FM  AL EA+ AA   E+P+G V V + KII R  N     ++ T HAE+LAI      
Sbjct: 10  KFMKEALFEAKLAAKIGEVPIGCVIVKDGKIIGRGHNLREHSQNATLHAEMLAIEEANET 69

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           ++   L +  L+VTLEPC MC+ AI  +RI  +YYGAS+PK G +         +  +H 
Sbjct: 70  VNSWRLVDTQLFVTLEPCPMCSGAIINSRIPEVYYGASDPKAGTVGTLMNLLEDSRFNHQ 129

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
             +  GI E     I++DFFK  R
Sbjct: 130 SFVEKGILENECASILKDFFKSIR 153


>gi|268318938|ref|YP_003292594.1| hypothetical protein FI9785_445 [Lactobacillus johnsonii FI9785]
 gi|262397313|emb|CAX66327.1| conserved hypothetical proteins [Lactobacillus johnsonii FI9785]
          Length = 160

 Score =  222 bits (566), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 54/149 (36%), Positives = 89/149 (59%), Gaps = 1/149 (0%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIR 60
           ++   +M  A E+A+ A  + E+P+GAV V  +  +I    NR    +D T HAE++AIR
Sbjct: 5   EQKEKYMHLAFEQAKKAEEQGEVPIGAVVVDKDGNVIGEGYNRRELDEDATQHAEMIAIR 64

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
             C+ L+   L +  L++TLEPC MC+ AI  +R+  +YYGA +PK G   +    + + 
Sbjct: 65  QACKKLNSWRLVDCSLFITLEPCPMCSGAIINSRLAEVYYGAFDPKAGAAGSVIDLFKVE 124

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H P+IY G+   ++ Q+++DFF+E R
Sbjct: 125 KFNHHPKIYGGLFRNQAAQMLKDFFREIR 153


>gi|89073121|ref|ZP_01159660.1| Putative cytosine/adenosine deaminase [Photobacterium sp. SKA34]
 gi|89051074|gb|EAR56531.1| Putative cytosine/adenosine deaminase [Photobacterium sp. SKA34]
          Length = 175

 Score =  222 bits (566), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 55/148 (37%), Positives = 78/148 (52%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           +    FM  A+E A  A    E+PVGAV V N +++    NR+    D TAHAEI+A+R 
Sbjct: 8   QNDEHFMRRAIELAAKAEEEGEVPVGAVVVYNGRVVGEGWNRSIGQHDATAHAEIMALRQ 67

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
             ++L    L +  LYVTLEPC MCA A+   R+ ++ YGA + K G   +     +   
Sbjct: 68  AGKVLENYRLIDTTLYVTLEPCPMCAGAMVHCRVGKVVYGADDLKTGAAGSTMNLLSYDG 127

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H  E   G+  +  R  +Q FFK RR
Sbjct: 128 VNHHVEQTSGVLVEECRAQLQAFFKRRR 155


>gi|209886356|ref|YP_002290213.1| tRNA-specific adenosine deaminase [Oligotropha carboxidovorans OM5]
 gi|209874552|gb|ACI94348.1| tRNA-specific adenosine deaminase [Oligotropha carboxidovorans OM5]
          Length = 181

 Score =  222 bits (566), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 78/143 (54%), Positives = 99/143 (69%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  AL +AQNA    E+P+G V V N  +I+ AGNR    +D TAHAE+LA+R     L
Sbjct: 39  FMDLALRQAQNAEANGEVPIGCVVVQNGTVIAAAGNRTITDRDPTAHAEMLALREAASKL 98

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
            +E L + DLYVTLEPCTMCA AIS ARIRRLYYGA +PKGG I++G +F+   TCHH P
Sbjct: 99  GRERLADCDLYVTLEPCTMCAGAISHARIRRLYYGALDPKGGAIDSGVRFFAQPTCHHVP 158

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+Y  + E  +  +++DFFK RR
Sbjct: 159 EVYSAVGEAEAAALLRDFFKTRR 181


>gi|260437836|ref|ZP_05791652.1| tRNA-specific adenosine deaminase [Butyrivibrio crossotus DSM 2876]
 gi|292809861|gb|EFF69066.1| tRNA-specific adenosine deaminase [Butyrivibrio crossotus DSM 2876]
          Length = 157

 Score =  222 bits (566), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 54/149 (36%), Positives = 81/149 (54%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M +   FM  A+ +A+ A   NE+P+G V V + KII+R  NR    K   AHAEI+AI+
Sbjct: 1   MTENEGFMKEAIRQAKKAEKLNEVPIGCVIVYDGKIIARGYNRRNTDKSTLAHAEIIAIK 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              +++    L +  LYVTLEPC MCA AI  ARI ++  G  N K G   +      + 
Sbjct: 61  RASKVIKDWRLEDCTLYVTLEPCQMCAGAIVQARIPKVVIGTMNSKAGCAGSVINVLQMK 120

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  +I  G+     ++++Q+FF+  R
Sbjct: 121 EFNHQVDICKGVLADECKEMMQNFFRNLR 149


>gi|198245375|ref|YP_002216635.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp.
           enterica serovar Dublin str. CT_02021853]
 gi|197939891|gb|ACH77224.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp.
           enterica serovar Dublin str. CT_02021853]
          Length = 172

 Score =  221 bits (565), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 55/147 (37%), Positives = 77/147 (52%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
               +M  AL  A+ A    E+PVGAV V N+++I    NR     D TAHAEI+A+R G
Sbjct: 7   DHEYWMRHALTLAKRAWDEREVPVGAVLVHNHRVIGEGWNRPIGRHDPTAHAEIMALRQG 66

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
             +L    L +  LYVTLEPC MCA A+  +RI R+ +GA + K G   +          
Sbjct: 67  GLVLQNYRLLDTTLYVTLEPCVMCAGAMVHSRIGRVVFGARDAKTGAAGSLIDVLHHPGM 126

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H  +I  G+       ++ DFF+ RR
Sbjct: 127 NHRVDIIEGVLRDECATLLSDFFRMRR 153


>gi|225569894|ref|ZP_03778919.1| hypothetical protein CLOHYLEM_05989 [Clostridium hylemonae DSM
           15053]
 gi|225161364|gb|EEG73983.1| hypothetical protein CLOHYLEM_05989 [Clostridium hylemonae DSM
           15053]
          Length = 159

 Score =  221 bits (565), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 54/146 (36%), Positives = 72/146 (49%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
              FM  A+++A  A   NE P+G V V   +II R  NR    K+  AHAEI AIR   
Sbjct: 5   DEKFMKEAIKQAGKAYALNETPIGCVIVYEGRIIGRGYNRRNTDKNTLAHAEITAIRKAS 64

Query: 64  RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123
           R +    L    LYVTLEPC MCA AI  +R+ R+  G  NPK G   +          +
Sbjct: 65  RKMGDWRLEGCTLYVTLEPCPMCAGAIVQSRMDRVVVGCMNPKAGCAGSVLNVLQTEGFN 124

Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149
           H  E+  G+       +++ FF+E R
Sbjct: 125 HQTELTTGVCGGECSSMMKSFFRELR 150


>gi|116629038|ref|YP_814210.1| cytosine/adenosine deaminase [Lactobacillus gasseri ATCC 33323]
 gi|238853616|ref|ZP_04643985.1| tRNA-specific adenosine deaminase [Lactobacillus gasseri 202-4]
 gi|311111167|ref|ZP_07712564.1| cytidine/deoxycytidylate deaminase family protein [Lactobacillus
           gasseri MV-22]
 gi|116094620|gb|ABJ59772.1| tRNA-adenosine deaminase [Lactobacillus gasseri ATCC 33323]
 gi|238833760|gb|EEQ26028.1| tRNA-specific adenosine deaminase [Lactobacillus gasseri 202-4]
 gi|311066321|gb|EFQ46661.1| cytidine/deoxycytidylate deaminase family protein [Lactobacillus
           gasseri MV-22]
          Length = 160

 Score =  221 bits (565), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 51/149 (34%), Positives = 87/149 (58%), Gaps = 1/149 (0%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIR 60
           K    +M  A  +A+ A  + E+P+GA+ V  +  +I    NR    +D T HAE++AIR
Sbjct: 5   KDKEKYMQLAFAQAKKAEDQGEVPIGAIVVDKDGNVIGEGYNRRELDEDATQHAEMIAIR 64

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
             C+ L    L +  L++TLEPC MC+ AI  +R+  +YYGA +PK G   +    + + 
Sbjct: 65  QACQNLGSWRLVDCSLFITLEPCPMCSGAIINSRLAEVYYGAFDPKAGAAGSVIDLFKVE 124

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H P+++ G+ + ++ Q+++DFF+E R
Sbjct: 125 KFNHHPKVFGGLFKDQAAQMLKDFFREIR 153


>gi|221067789|ref|ZP_03543894.1| CMP/dCMP deaminase zinc-binding [Comamonas testosteroni KF-1]
 gi|220712812|gb|EED68180.1| CMP/dCMP deaminase zinc-binding [Comamonas testosteroni KF-1]
          Length = 463

 Score =  221 bits (565), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 57/146 (39%), Positives = 82/146 (56%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
              FM  ALE+A+ AA   E+PVGAV V + ++I R  N     +D TAHAE+LA+R   
Sbjct: 8   HEHFMRQALEQARCAAACGEVPVGAVVVKDGQVIGRGHNSPLSAQDPTAHAEVLALREAA 67

Query: 64  RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123
           R L    L    LYVTLEPCTMC+ A+  AR+  + YGA+ P+ G   +    +  +T +
Sbjct: 68  RTLGNYRLEGCTLYVTLEPCTMCSGAMLHARVDAVVYGAAEPRTGAAGSVLDVFGYSTIN 127

Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149
           H   +  G+   +   +I +FF+ RR
Sbjct: 128 HQTRVLRGVLAAQCSALIAEFFQLRR 153


>gi|325697330|gb|EGD39216.1| tRNA-specific adenosine deaminase [Streptococcus sanguinis SK160]
          Length = 165

 Score =  221 bits (565), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 60/149 (40%), Positives = 85/149 (57%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +++   FM  AL+EA+ A   +EIP+G V V   KII R  N   EL+    HAEI+AI 
Sbjct: 15  IEEKEAFMREALKEAEIALAHDEIPIGCVLVKEGKIIGRGHNAREELQRAVMHAEIMAIE 74

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              R  +   L +  L+VT+EPC MC+ AI LARI  + YGA+N K G   +     T  
Sbjct: 75  EANRHENSWRLLDTTLFVTIEPCVMCSGAIGLARIPHVVYGAANQKFGAAGSLYDILTDE 134

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  E+  G+ ++   QI+QDFF++RR
Sbjct: 135 RLNHRVEVETGVLQEECAQIMQDFFRQRR 163


>gi|269138128|ref|YP_003294828.1| tRNA-specific adenosine deaminase [Edwardsiella tarda EIB202]
 gi|267983788|gb|ACY83617.1| tRNA-specific adenosine deaminase [Edwardsiella tarda EIB202]
          Length = 180

 Score =  221 bits (565), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 59/148 (39%), Positives = 83/148 (56%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           +  + +M  AL+ A+ A  + E+PVGAV VLN+++I    NR     D TAHAEI+A++ 
Sbjct: 14  RDDSDWMRHALQLAEKARAQGEVPVGAVLVLNDRVIGEGWNRPITRHDPTAHAEIMALQQ 73

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
           G  I+    L E  LYVTLEPC MCA A+  +RIRRL YGA + K G   +         
Sbjct: 74  GGAIMQNYRLLEATLYVTLEPCVMCAGAMVHSRIRRLVYGAPDLKTGAAGSLLDVLGHPG 133

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H  E+  G+        + DFF++RR
Sbjct: 134 MNHRIEVCGGVLADACAAQLSDFFRQRR 161


>gi|71280259|ref|YP_270337.1| cytidine/deoxycytidylate deaminase zinc-binding domain-containing
           protein [Colwellia psychrerythraea 34H]
 gi|71145999|gb|AAZ26472.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein
           [Colwellia psychrerythraea 34H]
          Length = 182

 Score =  221 bits (565), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 55/142 (38%), Positives = 72/142 (50%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
              FM  A E AQ A   +EIPVGAV V   KII    N++  L D ++HAE+ AIR   
Sbjct: 22  DLTFMRRAFELAQQAEQHDEIPVGAVVVHQGKIIGEGFNQSIMLNDPSSHAEMNAIRQAG 81

Query: 64  RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123
             L+   L +  LYVTLEPC MCA  +  +RI RL Y  S+ K G   +          +
Sbjct: 82  EFLNNYRLLDCTLYVTLEPCPMCAGLLVHSRINRLVYACSDLKTGAAGSAFNLVNNPQLN 141

Query: 124 HSPEIYPGISEQRSRQIIQDFF 145
           H  E+   I E+   Q++  FF
Sbjct: 142 HQLEVCSNILEEECSQLLSAFF 163


>gi|295089886|emb|CBK75993.1| Cytosine/adenosine deaminases [Clostridium cf. saccharolyticum K10]
          Length = 214

 Score =  221 bits (565), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 57/149 (38%), Positives = 78/149 (52%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           + +   +M  A+ +A+ A    E+P+G V V   KII R  NR     +V AHAEILAIR
Sbjct: 39  LTEDERYMREAVRQAKKAWALGEVPIGCVIVHRGKIIGRGYNRRTTDGNVLAHAEILAIR 98

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
             CRI+    L E  +YVTLEPC MCA AI  ARI ++  G  NPK G   +        
Sbjct: 99  KACRIIGDWRLEECTMYVTLEPCPMCAGAIVQARIPKVVIGCMNPKAGCAGSVLDLLHEE 158

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  E   G   +    ++++FF+E R
Sbjct: 159 GFNHQAETEVGTLGEECSSMLKEFFRELR 187


>gi|42518517|ref|NP_964447.1| hypothetical protein LJ0422 [Lactobacillus johnsonii NCC 533]
 gi|41582802|gb|AAS08413.1| hypothetical protein LJ_0422 [Lactobacillus johnsonii NCC 533]
          Length = 160

 Score =  221 bits (565), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 54/149 (36%), Positives = 89/149 (59%), Gaps = 1/149 (0%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIR 60
           ++   +M  A E+A+ A  + E+P+GAV V  +  +I    NR    +D T HAE++AIR
Sbjct: 5   EQKEKYMHLAFEQAKKAEEQGEVPIGAVVVDKDGNVIGEGYNRRELDEDATQHAEMIAIR 64

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
             C+ L+   L +  L++TLEPC MC+ AI  +R+  +YYGA +PK G   +    + + 
Sbjct: 65  QACKNLNSWRLVDCSLFITLEPCPMCSGAIINSRLAEVYYGAFDPKAGAASSVIDLFKVE 124

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H P+IY G+   ++ Q+++DFF+E R
Sbjct: 125 KFNHHPKIYGGLFRDQAAQMLKDFFREIR 153


>gi|289435993|ref|YP_003465865.1| cytidine/deoxycytidylate deaminase family protein [Listeria
           seeligeri serovar 1/2b str. SLCC3954]
 gi|289172237|emb|CBH28783.1| cytidine/deoxycytidylate deaminase family protein [Listeria
           seeligeri serovar 1/2b str. SLCC3954]
          Length = 156

 Score =  221 bits (565), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 58/144 (40%), Positives = 83/144 (57%)

Query: 6   VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
            FM  AL EA+ A    E+P+GAV VL+ +II RA N     ++   HAE+LAI+  C  
Sbjct: 5   FFMQQALVEAEKAREIGEVPIGAVVVLDGEIIGRAHNLRETSQNAVTHAELLAIQDACNH 64

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
                L   +LYVTLEPC MC+ AI L+RI ++YYGA +PK G   +          +H+
Sbjct: 65  QKSWRLSGAELYVTLEPCPMCSGAILLSRIDKVYYGAKDPKAGTAGSLMNLLQDDRFNHT 124

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
            E+  G+ E  S ++++ FF+E R
Sbjct: 125 CEVESGLMEAESSEMLKSFFQELR 148


>gi|261417404|ref|YP_003251087.1| CMP/dCMP deaminase zinc-binding protein [Fibrobacter succinogenes
           subsp. succinogenes S85]
 gi|261373860|gb|ACX76605.1| CMP/dCMP deaminase zinc-binding protein [Fibrobacter succinogenes
           subsp. succinogenes S85]
          Length = 210

 Score =  221 bits (565), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 54/148 (36%), Positives = 76/148 (51%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
            +   FM  AL +AQ A    EIP+G V V +  +I +  N+  +LKD TAHAEI+AI  
Sbjct: 50  SEDEKFMRMALRQAQIAFDMKEIPIGCVIVKDGVVIGKGYNQVEQLKDATAHAEIIAIGT 109

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
               L    L    LYVTLEPC MCA AI  +R+ R+ YG+ + + GG        T   
Sbjct: 110 AASTLDNWRLDGCTLYVTLEPCPMCAGAILNSRVSRIVYGSPDSRFGGCGTTIDVITGNA 169

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
              + E+  GI       +++ FF++ R
Sbjct: 170 LKRAVEVTGGILADECLGLLKGFFQQMR 197


>gi|270264772|ref|ZP_06193037.1| hypothetical protein SOD_i01890 [Serratia odorifera 4Rx13]
 gi|270041455|gb|EFA14554.1| hypothetical protein SOD_i01890 [Serratia odorifera 4Rx13]
          Length = 168

 Score =  221 bits (565), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 59/147 (40%), Positives = 78/147 (53%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
               +M  AL  AQ A    E+PVGA+ VL+N++I    NR     D TAHAEI+A+R G
Sbjct: 5   NDEYWMRQALLLAQRAQEEGEVPVGALLVLDNQVIGEGWNRPIGRHDPTAHAEIMALRQG 64

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
             +L    L    LYVTLEPC MCA A+  +RIRRL YGA++ K G   +          
Sbjct: 65  GAVLQNYRLLNATLYVTLEPCVMCAGAMVHSRIRRLVYGAADVKTGAAGSLVDILRHPGM 124

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H  EI  G+        + +FF+ RR
Sbjct: 125 NHQVEIASGVLADECAATLSNFFRLRR 151


>gi|120598186|ref|YP_962760.1| CMP/dCMP deaminase, zinc-binding [Shewanella sp. W3-18-1]
 gi|120558279|gb|ABM24206.1| tRNA-adenosine deaminase [Shewanella sp. W3-18-1]
          Length = 164

 Score =  221 bits (564), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 50/146 (34%), Positives = 73/146 (50%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
              +M  A++ A+ A    E+PVGAV V + + I+   N +    D +AHAEIL +R   
Sbjct: 2   DEYWMQVAMQMAEKAEAAGEVPVGAVLVKDGQQIATGYNLSISQHDPSAHAEILCLRSAG 61

Query: 64  RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123
           + L    L +  LY+TLEPC MCA A+  +RI R+ YGA + K G              +
Sbjct: 62  KKLENYRLLDATLYITLEPCAMCAGAMVHSRIARVVYGARDEKTGAAGTVVNLLQHPAFN 121

Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149
           H  E+  G+  +     +  FFK RR
Sbjct: 122 HQVEVTSGVLAEACSAQLSRFFKRRR 147


>gi|255659416|ref|ZP_05404825.1| tRNA-specific adenosine deaminase [Mitsuokella multacida DSM 20544]
 gi|260848379|gb|EEX68386.1| tRNA-specific adenosine deaminase [Mitsuokella multacida DSM 20544]
          Length = 169

 Score =  221 bits (564), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 57/150 (38%), Positives = 87/150 (58%), Gaps = 1/150 (0%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAI 59
           M++   +M  ALEEAQ A    E+P+GAV V    ++++R  N      D TAHAE++AI
Sbjct: 1   MQEDAYYMRLALEEAQKAYDLEEVPIGAVLVDREGEVVARGHNMREVWHDATAHAEMIAI 60

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
           R  C    +  L  + LYVT+EPC MCA AI ++R+ R+ YG+++ + G  E+       
Sbjct: 61  REACAKEGRWRLSGLTLYVTIEPCPMCAGAIVMSRVDRVVYGSTDARAGACESVFNIPGC 120

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
              +H PE+  G+ ++    I++ FFKERR
Sbjct: 121 PALNHRPEMTAGVLQEECAGIMKRFFKERR 150


>gi|189426160|ref|YP_001953337.1| CMP/dCMP deaminase zinc-binding [Geobacter lovleyi SZ]
 gi|189422419|gb|ACD96817.1| CMP/dCMP deaminase zinc-binding [Geobacter lovleyi SZ]
          Length = 157

 Score =  221 bits (564), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 58/148 (39%), Positives = 79/148 (53%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           +  + +M  A+ EA+ A +  E+P+G V V NN+II+RA N     +D  AHAE+LAIR 
Sbjct: 3   RTHDYWMDKAIAEARKAEVIAEVPIGCVIVQNNRIIARAHNLREAKQDPAAHAELLAIRK 62

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
             R L    L E  LYVTLEPC MC  AI LARI  + +G  +PK G   +         
Sbjct: 63  AARKLGNWRLLETTLYVTLEPCLMCMGAILLARIPTVVFGCHDPKAGAAGSLYDLSNDPR 122

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H  E+  GI  Q    ++ +FF   R
Sbjct: 123 LNHRFELVSGIRRQECSSMLSEFFAALR 150


>gi|114562317|ref|YP_749830.1| CMP/dCMP deaminase, zinc-binding [Shewanella frigidimarina NCIMB
           400]
 gi|114333610|gb|ABI70992.1| tRNA-adenosine deaminase [Shewanella frigidimarina NCIMB 400]
          Length = 189

 Score =  221 bits (564), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 51/146 (34%), Positives = 77/146 (52%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
              +M  A++ A+ A L+ E+PVGAV V ++ +I+   N +    D TAHAE+  IR   
Sbjct: 32  DEKWMRLAMQLAEQAELKGEVPVGAVLVKDDVLIASGCNLSIVNHDPTAHAEMECIRQAG 91

Query: 64  RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123
           ++L    + +  LYVTLEPCTMCA A+  +RI R+ YGA + K G   +          +
Sbjct: 92  KVLENYRMLDTTLYVTLEPCTMCAGAMVHSRITRVVYGADDLKTGAAGSVINLLQHPVFN 151

Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149
           H  E+  G+        +  FF+ RR
Sbjct: 152 HQLEVSSGVLAAECGAQLSAFFQRRR 177


>gi|326390318|ref|ZP_08211877.1| CMP/dCMP deaminase, zinc-binding [Thermoanaerobacter ethanolicus JW
           200]
 gi|325993595|gb|EGD52028.1| CMP/dCMP deaminase, zinc-binding [Thermoanaerobacter ethanolicus JW
           200]
          Length = 148

 Score =  221 bits (564), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 56/145 (38%), Positives = 81/145 (55%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           N FM  A+ EA+ +    E+PVGAV V + +II +  N+     D T HAEILAI+  C+
Sbjct: 3   NRFMEAAILEAKKSYQLGEVPVGAVIVKDGQIIGKGFNQKESSNDATTHAEILAIKEACK 62

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
            L    L +  +YVTLEPC MCA AI  +RI+R+Y GA + + G           +    
Sbjct: 63  TLGSWRLDDCSMYVTLEPCPMCAGAILESRIKRVYIGAESERTGAAGTVVDILNNSYLGS 122

Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149
             E+Y GI E+  + +++DFF+  R
Sbjct: 123 KTEVYFGIMEEECKTLLKDFFENLR 147


>gi|320157222|ref|YP_004189601.1| tRNA-specific adenosine-34 deaminase [Vibrio vulnificus MO6-24/O]
 gi|319932534|gb|ADV87398.1| tRNA-specific adenosine-34 deaminase [Vibrio vulnificus MO6-24/O]
          Length = 181

 Score =  221 bits (564), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 55/147 (37%), Positives = 79/147 (53%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
           +  VFM  A+E A  A    E+PVGAV V + ++I+   N++    D TAHAEI  +R  
Sbjct: 11  QDEVFMRRAIELAAIAESEGEVPVGAVLVKDGEVIAEGWNQSIGQHDATAHAEIQTLRQA 70

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
            + L    L +  LYVTLEPC MCA A+  +R++R+ +GA + K G        ++    
Sbjct: 71  GQSLGNYRLLDTTLYVTLEPCPMCAGALLHSRVKRIVFGAPDLKAGAAGTVLDLFSSQAA 130

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H   I  G+ E   R  +Q FFK RR
Sbjct: 131 YHYATIEKGLLESECRDQLQAFFKRRR 157


>gi|322418061|ref|YP_004197284.1| CMP/dCMP deaminase zinc-binding protein [Geobacter sp. M18]
 gi|320124448|gb|ADW12008.1| CMP/dCMP deaminase zinc-binding protein [Geobacter sp. M18]
          Length = 162

 Score =  220 bits (563), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 56/150 (37%), Positives = 86/150 (57%), Gaps = 1/150 (0%)

Query: 1   MKK-GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
           MKK  + +M  A+++A+ A    E+P+GAV V +  +I+R  N     +D  AHAE++AI
Sbjct: 1   MKKNDHYWMGKAIDQARKAESIGEVPIGAVIVKDGAVIARGHNLRESKQDPAAHAELIAI 60

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
           R   + LS   L    LYVTLEPCTMC  AI L+R+ R+ +G+ +PKGG   +   F   
Sbjct: 61  RKAAKKLSSWRLTGATLYVTLEPCTMCMGAIILSRLDRVVFGSYDPKGGAAGSLFDFSDD 120

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
              +HS  + PG+  + +  ++  FF + R
Sbjct: 121 KRLNHSVVLTPGVRGEETSSMLSCFFAKLR 150


>gi|227112728|ref|ZP_03826384.1| tRNA-specific adenosine deaminase [Pectobacterium carotovorum
           subsp. brasiliensis PBR1692]
          Length = 168

 Score =  220 bits (563), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 61/149 (40%), Positives = 78/149 (52%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           ++    +M  AL  AQ A    E+PVGAV VL+N+ I    NR     D TAHAEI+A+R
Sbjct: 4   LRNDEYWMRHALMLAQRAQDEGEVPVGAVLVLDNEAIGEGWNRPIGHHDPTAHAEIMALR 63

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
            G ++L    L E  LYVTLEPC MCA A+  +RI RL YGAS+ K G   +        
Sbjct: 64  QGGQVLQNYRLLETTLYVTLEPCIMCAGAMVHSRIGRLVYGASDEKTGAAGSLVDILRHP 123

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H   I  GI        +  FF+ RR
Sbjct: 124 GMNHQIVIESGILADECSATLSTFFRLRR 152


>gi|153834810|ref|ZP_01987477.1| tRNA-specific adenosine deaminase [Vibrio harveyi HY01]
 gi|148868738|gb|EDL67812.1| tRNA-specific adenosine deaminase [Vibrio harveyi HY01]
          Length = 177

 Score =  220 bits (563), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 56/147 (38%), Positives = 80/147 (54%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
           +  +FM  A+E A+ A    E+PVGAV V + +II+   NR+    D TAHAEI  +R  
Sbjct: 9   QDELFMRRAMELAEQAEAEGEVPVGAVLVKDGEIIAEGWNRSICAHDATAHAEIQTLRKA 68

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
            + L    L +  LYVTLEPC MCA A+  +R++R+ YGA + K G        +     
Sbjct: 69  GKALGNYRLLDTTLYVTLEPCPMCAGALLHSRVKRVVYGAPDLKAGAAGTVLNLFESQAA 128

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H   +  G+ E+  R  +Q FFK RR
Sbjct: 129 YHYATVENGLLEEECRSQLQAFFKRRR 155


>gi|229823590|ref|ZP_04449659.1| hypothetical protein GCWU000282_00889 [Catonella morbi ATCC 51271]
 gi|229787034|gb|EEP23148.1| hypothetical protein GCWU000282_00889 [Catonella morbi ATCC 51271]
          Length = 178

 Score =  220 bits (563), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 52/147 (35%), Positives = 80/147 (54%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
           +   +M  ALE A  A    E+P+GA+ V +  +++ A N        TAHAE+LAI   
Sbjct: 14  QHEYWMQQALELADQAQALGEVPIGALLVKDGVLLASAYNLREVNHQATAHAELLAIEAA 73

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
            + L    L    LYVTLEPC MCA A+ L+R+ ++ YGAS+PKGG   +       +  
Sbjct: 74  NQALGAWRLEGCTLYVTLEPCPMCAGALVLSRVDQVVYGASDPKGGCAGSLMNLLEDSRF 133

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H P++  G+ E +    +++FF+  R
Sbjct: 134 NHQPQVIRGVLEAQCSDKLKNFFQGLR 160


>gi|157150388|ref|YP_001449474.1| putative cytidine/deoxycytidylate deaminase [Streptococcus gordonii
           str. Challis substr. CH1]
 gi|157075182|gb|ABV09865.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus
           gordonii str. Challis substr. CH1]
          Length = 177

 Score =  220 bits (563), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 58/148 (39%), Positives = 83/148 (56%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           ++   FM  AL+EA+ A   +EIP+G V V + +II R  N   EL+    HAEI+AI  
Sbjct: 28  EEKEYFMLEALKEARIALENDEIPIGCVIVRDGQIIGRGHNAREELQRAVMHAEIMAIEE 87

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
                +   L +  L+VT+EPC MC+ AI LARI  + YGA+N K G   +     T   
Sbjct: 88  ANHHENGWRLLDTTLFVTIEPCVMCSGAIGLARIPHVVYGAANQKFGAAGSLYDILTDER 147

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H  E+  G+ ++   QI+QDFF+ RR
Sbjct: 148 LNHRVEVETGVLQEECAQIMQDFFRNRR 175


>gi|253996102|ref|YP_003048166.1| CMP/dCMP deaminase zinc-binding [Methylotenera mobilis JLW8]
 gi|253982781|gb|ACT47639.1| CMP/dCMP deaminase zinc-binding [Methylotenera mobilis JLW8]
          Length = 165

 Score =  220 bits (563), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 59/148 (39%), Positives = 78/148 (52%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           ++   FM+ AL  A+ AAL  E+PVGA+ V +  II R  N    L D +AHAEI A+R 
Sbjct: 10  EQDQAFMNIALTLAKQAALAGEVPVGAIVVKDGVIIGRGSNAPITLHDPSAHAEIQAMRD 69

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
             + L    L +  LYVTLEPC MCA AI  ARI +L YGAS+ K G   +         
Sbjct: 70  AAQHLGNYRLVDCTLYVTLEPCAMCAGAIQHARIAKLVYGASDQKTGACGSVVNLMAEQK 129

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H   +  G+       ++  FF ERR
Sbjct: 130 LNHHTTVASGLLADECGMMLSSFFSERR 157


>gi|237745836|ref|ZP_04576316.1| tRNA-specific adenosine deaminase [Oxalobacter formigenes HOxBLS]
 gi|229377187|gb|EEO27278.1| tRNA-specific adenosine deaminase [Oxalobacter formigenes HOxBLS]
          Length = 150

 Score =  220 bits (563), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 56/147 (38%), Positives = 83/147 (56%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
             +VFM  AL++A  A    E+PVGAV VL  ++I+   N      D TAHAEI+A+R  
Sbjct: 2   TDDVFMRAALDQAALAKEAGEVPVGAVVVLEGRVIASGFNCPISRHDPTAHAEIMALRNA 61

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
            +I     LP  +LYVTLEPC+MCA A+  AR++R+ +GA +PK G   +    +     
Sbjct: 62  AKICGNYRLPACELYVTLEPCSMCAGAMIHARLKRVVFGAFDPKTGACGSVVDLFGQKEL 121

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H   +  G+ +     +++ FF ERR
Sbjct: 122 NHHTTVTSGVLQDECSLLLKMFFAERR 148


>gi|148262140|ref|YP_001228846.1| CMP/dCMP deaminase, zinc-binding [Geobacter uraniireducens Rf4]
 gi|146395640|gb|ABQ24273.1| tRNA-adenosine deaminase [Geobacter uraniireducens Rf4]
          Length = 176

 Score =  220 bits (563), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 56/148 (37%), Positives = 77/148 (52%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           K    +M  A+ EA+ AA R E+P+GAV V + KIISR  N     +D  AHAE++AIR 
Sbjct: 20  KDDVWWMGSAIREAEKAAERGEVPIGAVIVRDGKIISRGYNLREGKQDPAAHAELIAIRK 79

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
             + L    L    LYVTLEPC MC  AI LAR+ ++ +G  +PKGG   +         
Sbjct: 80  AAKKLGNWRLAGTTLYVTLEPCIMCMGAILLARVEKVVFGCYDPKGGAAGSLYDLSDDKR 139

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H   +  GI +     ++  FF   R
Sbjct: 140 LNHRVTLVAGIRQAECAALLSGFFAALR 167


>gi|262395051|ref|YP_003286905.1| tRNA-specific adenosine-34 deaminase [Vibrio sp. Ex25]
 gi|262338645|gb|ACY52440.1| tRNA-specific adenosine-34 deaminase [Vibrio sp. Ex25]
          Length = 182

 Score =  220 bits (563), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 53/147 (36%), Positives = 78/147 (53%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
           +  +FM  A+  A+ A    E+PVGAV V + +II+   NR+    D TAHAEI  +R  
Sbjct: 9   QDELFMRRAMVLAEQAEAEGEVPVGAVLVKDGEIIAEGWNRSIGTNDATAHAEIQTLRKA 68

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
            + +    L +  LYVTLEPC MCA A+  +R++R+ +GA + K G        +     
Sbjct: 69  GQKIENYRLLDTTLYVTLEPCPMCAGALLHSRVKRVVFGAPDLKAGAAGTVLNLFESQAA 128

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H   +  G+ E   R  +Q FFK RR
Sbjct: 129 YHYALVEKGLLEDECRTQLQAFFKRRR 155


>gi|17989385|ref|NP_542018.1| cytosine deaminase [Brucella melitensis bv. 1 str. 16M]
 gi|148558663|ref|YP_001257252.1| cytidine and deoxycytidylate deaminase family protein [Brucella
           ovis ATCC 25840]
 gi|297249905|ref|ZP_06933606.1| cytosine deaminase [Brucella abortus bv. 5 str. B3196]
 gi|17985258|gb|AAL54282.1| cytosine deaminase [Brucella melitensis bv. 1 str. 16M]
 gi|148369948|gb|ABQ62820.1| cytidine and deoxycytidylate deaminase family protein [Brucella
           ovis ATCC 25840]
 gi|297173774|gb|EFH33138.1| cytosine deaminase [Brucella abortus bv. 5 str. B3196]
          Length = 204

 Score =  220 bits (563), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 93/142 (65%), Positives = 110/142 (77%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  ALEEA  A  R E+P+GAV V + +II+RAGNR RE  DVTAHAEIL IR    +L 
Sbjct: 63  MDIALEEAHAAGERGEVPIGAVIVRDGEIIARAGNRTREFNDVTAHAEILTIRQAGEMLG 122

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
            E L + DLYVTLEPC MCAAAIS ARIRRLYYGAS+PKGGGIE+G +FYT  TCHH+PE
Sbjct: 123 SERLIDCDLYVTLEPCAMCAAAISFARIRRLYYGASDPKGGGIEHGGRFYTQPTCHHAPE 182

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
           IYPG  E  +R+I++DFF+E+R
Sbjct: 183 IYPGFCEADARKILKDFFREKR 204


>gi|331265454|ref|YP_004325084.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus
           oralis Uo5]
 gi|326682126|emb|CBY99742.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus
           oralis Uo5]
          Length = 155

 Score =  220 bits (563), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 58/148 (39%), Positives = 80/148 (54%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           ++   FM  AL+EA+ A   +EIP+G V V + +II R  N   EL+    HAEI+AI  
Sbjct: 6   EEKESFMREALKEAEIALEHDEIPIGCVIVKDGEIIGRGHNAREELQRAVMHAEIMAIEN 65

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
                    L +  L+VT+EPC MC+ AI LARI ++ YGA N K G   +     T   
Sbjct: 66  ANLSEESWRLLDCTLFVTIEPCVMCSGAIGLARIPKVVYGAKNQKFGAAGSLYDILTDER 125

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H  E+  G+ E     I+QDFF+ RR
Sbjct: 126 LNHRVEVETGVLESECAAIMQDFFRNRR 153


>gi|196228535|ref|ZP_03127402.1| CMP/dCMP deaminase zinc-binding [Chthoniobacter flavus Ellin428]
 gi|196227938|gb|EDY22441.1| CMP/dCMP deaminase zinc-binding [Chthoniobacter flavus Ellin428]
          Length = 156

 Score =  220 bits (563), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 61/147 (41%), Positives = 84/147 (57%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
               FM  AL +A+ A  + E+P+GAV V   +II+RA N+   LKD TAHAE+LAI   
Sbjct: 9   SDTYFMGEALRQARRAWEQEEVPIGAVIVHQGRIIARACNQVEVLKDATAHAEMLAITQA 68

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
             +L    L E DLYVT EPC MCA A+   R++R+ +G  +PK G   +  Q       
Sbjct: 69  ESVLGDWRLNECDLYVTKEPCPMCAGALVHVRMKRVVFGCPSPKDGAGGSLLQILQHPKL 128

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +HS EI  G+ +     ++Q FF+ERR
Sbjct: 129 NHSCEITTGVRQDECAAMLQAFFRERR 155


>gi|253580414|ref|ZP_04857679.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
 gi|251848144|gb|EES76109.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
          Length = 181

 Score =  220 bits (563), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 48/149 (32%), Positives = 75/149 (50%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +     FM  A+ +A+ A    E+P+G V V   KII+R  NR    K+  +HAE+ AIR
Sbjct: 10  LTDQERFMKEAIRQAKKAEALEEVPIGCVIVHEGKIIARGYNRRNTDKNTLSHAELNAIR 69

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              + L    L    +YVTLEPC MC+ A+  +RI  +  G  N K G   +      + 
Sbjct: 70  KASKKLGDWRLEGCTMYVTLEPCQMCSGALVQSRIDEVVIGCMNAKAGCAGSVMNLLQVD 129

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  +I  G+ E+    ++ +FF++ R
Sbjct: 130 GFNHQVKIIQGVLEEECSSMLSEFFRKLR 158


>gi|238918820|ref|YP_002932334.1| cytidine and deoxycytidylate deaminase family protein [Edwardsiella
           ictaluri 93-146]
 gi|238868388|gb|ACR68099.1| cytidine and deoxycytidylate deaminase family protein [Edwardsiella
           ictaluri 93-146]
          Length = 170

 Score =  220 bits (563), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 58/148 (39%), Positives = 83/148 (56%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           +  + +M  AL+ A+ A  + E+PVGAV VLN+++I    NR     D TAHAEI+A++ 
Sbjct: 4   RDDSDWMRHALQLAEKARAQGEVPVGAVLVLNDRVIGEGWNRPITRHDPTAHAEIMALQQ 63

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
           G  ++    L E  LYVTLEPC MCA A+  +RIRRL YGA + K G   +         
Sbjct: 64  GGAVMQNYRLLEATLYVTLEPCVMCAGAMVHSRIRRLVYGAPDLKTGAAGSLLDVLGHPG 123

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H  E+  G+        + DFF++RR
Sbjct: 124 MNHRIEVCGGVLADACAAQLSDFFRQRR 151


>gi|94310515|ref|YP_583725.1| tRNA-adenosine deaminase [Cupriavidus metallidurans CH34]
 gi|93354367|gb|ABF08456.1| tRNA-specific adenosine deaminase [Cupriavidus metallidurans CH34]
          Length = 189

 Score =  220 bits (562), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 55/144 (38%), Positives = 87/144 (60%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           ++   +M+ AL+EA+ A    E+PVGAV V ++KII+R  N      D +AHAE+ A+R 
Sbjct: 12  ERDRFYMAAALDEARLAEAAGEVPVGAVVVWDDKIIARGHNLPIRSVDPSAHAEMQALRA 71

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
             ++L    +PE ++YVTLEPC MC+ AI  AR+R + +GA++PK G   +    +  AT
Sbjct: 72  AAKVLGNYRMPECEIYVTLEPCPMCSGAILHARLRHVVFGATDPKTGAAGSVVDLFAQAT 131

Query: 122 CHHSPEIYPGISEQRSRQIIQDFF 145
            +H   +  G+      Q+++DFF
Sbjct: 132 LNHQTTLTRGVMADECGQLLRDFF 155


>gi|319655047|ref|ZP_08009117.1| cytidine/deoxycytidylate deaminase [Bacillus sp. 2_A_57_CT2]
 gi|317393271|gb|EFV74039.1| cytidine/deoxycytidylate deaminase [Bacillus sp. 2_A_57_CT2]
          Length = 178

 Score =  220 bits (562), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 55/147 (37%), Positives = 83/147 (56%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
            +  ++M  A++EA+ A    E+P+GAV VL  +II+RA N     +   AHAE+LAI  
Sbjct: 7   TEDELYMQEAIKEAKLAEGLEEVPIGAVIVLEGEIIARAHNLREVNQTAIAHAELLAIDQ 66

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
            C+ L    L    LYVTLEPC MC+ +I L+RI+++ YGA +PKGG             
Sbjct: 67  ACKNLGTWRLENAVLYVTLEPCPMCSGSIILSRIKKVVYGAKDPKGGCAGTLMNLLQDER 126

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKER 148
            +H  E+ PG+ E+   +++  FF+  
Sbjct: 127 FNHQSEVVPGVLEEECGEMLSSFFRGL 153


>gi|289825514|ref|ZP_06544721.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-3139]
          Length = 172

 Score =  220 bits (562), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 56/147 (38%), Positives = 77/147 (52%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
               +M  AL  A+ A    E+PVGAV V N+++I    NR     D TAHAEI+A+R G
Sbjct: 7   DHEYWMRHALTLAKRAWDEREVPVGAVLVHNHRVIGEGWNRPIGRHDPTAHAEIMALRQG 66

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
             +L    L +  LYVTLEPC MCA A+  +RI R+ +GA + K G   +          
Sbjct: 67  GLVLQNYRLLDTTLYVTLEPCVMCAGAMVHSRIGRVVFGARDAKTGAARSLIDVLHHPGM 126

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H  EI  G+       ++ DFF+ RR
Sbjct: 127 NHRVEIIEGVLRDECATLLSDFFRMRR 153


>gi|298571687|gb|ADI87839.1| hypothetical protein AKSOIL_0331 [uncultured bacterium Ak20-3]
          Length = 156

 Score =  220 bits (562), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 60/148 (40%), Positives = 81/148 (54%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           K    FM   LE A  A    E+P+GAV V + KIIS + N+  +  D T HAEILAI  
Sbjct: 6   KNHEYFMKRCLELAHEAEKNLEVPIGAVIVHDGKIISESSNKREKNHDATGHAEILAIHD 65

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
            C+ L    L   DLYVTLEPC MCA A+  ARIR +Y+GA +PKGG + +  + +    
Sbjct: 66  ACQKLQSWRLSACDLYVTLEPCLMCAGALVQARIRNVYFGAYDPKGGALGSLYKIHEDTR 125

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H      G+       ++  FFK++R
Sbjct: 126 LNHRFPAVGGVLGDECGSLLSTFFKKKR 153


>gi|170023497|ref|YP_001720002.1| tRNA-specific adenosine deaminase [Yersinia pseudotuberculosis
           YPIII]
 gi|169750031|gb|ACA67549.1| CMP/dCMP deaminase zinc-binding [Yersinia pseudotuberculosis YPIII]
          Length = 187

 Score =  220 bits (562), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 59/147 (40%), Positives = 77/147 (52%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
               +M  AL  A  A    E+PVGAV VL NK+I    NR     D TAHAEI+A+R G
Sbjct: 24  SDEYWMRHALTLALRAQEEGEVPVGAVLVLGNKVIGEGWNRPIRDNDPTAHAEIMALRQG 83

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
            + +    L +  LYVTLEPC MCA A+  +RIRRL YGA++ K G   +          
Sbjct: 84  GQAVQNYRLLDATLYVTLEPCVMCAGAMVHSRIRRLVYGANDVKTGAAGSLVDILRHPGM 143

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H  E+  GI        +  FF++RR
Sbjct: 144 NHQIEVSAGILATACSHQLSAFFRQRR 170


>gi|259907686|ref|YP_002648042.1| tRNA-specific adenosine deaminase [Erwinia pyrifoliae Ep1/96]
 gi|224963308|emb|CAX54793.1| tRNA-specific adenosine deaminase [Erwinia pyrifoliae Ep1/96]
 gi|310764806|gb|ADP09756.1| tRNA-specific adenosine deaminase [Erwinia sp. Ejp617]
          Length = 166

 Score =  220 bits (562), Expect = 5e-56,   Method: Composition-based stats.
 Identities = 55/151 (36%), Positives = 79/151 (52%), Gaps = 2/151 (1%)

Query: 1   MKKG--NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           M       +M  AL  A+ A    E+PVGAV VL+ + I    NR     D TAHAE++A
Sbjct: 1   MTDHNEEYWMRHALRLARRAWDEGEVPVGAVLVLDGQAIGEGWNRPIGQHDPTAHAEMMA 60

Query: 59  IRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
           +R G +++    L +  LYVTLEPC MCA A+   R+ RL YGA + K G   +      
Sbjct: 61  LRQGGKVIENYRLLDTTLYVTLEPCVMCAGAMIHGRVGRLVYGARDAKTGAAGSLLDVLG 120

Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
            A  +H  ++  G+       ++ DFF++RR
Sbjct: 121 HAGMNHHVQVDCGVLRDECAAMLSDFFRQRR 151


>gi|37679027|ref|NP_933636.1| cytosine/adenosine deaminase [Vibrio vulnificus YJ016]
 gi|37197769|dbj|BAC93607.1| cytosine/adenosine deaminase [Vibrio vulnificus YJ016]
          Length = 181

 Score =  220 bits (562), Expect = 5e-56,   Method: Composition-based stats.
 Identities = 55/147 (37%), Positives = 80/147 (54%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
           +  VFM  A+E A  A    E+PVGAV V + ++I+   N++    D TAHAEI  +R  
Sbjct: 11  QDEVFMRRAIELAAIAESEGEVPVGAVLVKDGEVIAEGWNQSIGQHDATAHAEIQTLRQA 70

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
            + L    L +  LYVTLEPC MCA A+  +R++R+ +GA + K G        ++    
Sbjct: 71  GQSLGNYRLLDTTLYVTLEPCPMCAGALLHSRVKRIVFGAPDLKAGAAGTVLDLFSSQAA 130

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H   I  G+ E   R+ +Q FFK RR
Sbjct: 131 YHYATIDKGLLESECREQLQAFFKRRR 157


>gi|85712706|ref|ZP_01043751.1| Cytosine/adenosine deaminase putative [Idiomarina baltica OS145]
 gi|85693438|gb|EAQ31391.1| Cytosine/adenosine deaminase putative [Idiomarina baltica OS145]
          Length = 179

 Score =  220 bits (562), Expect = 5e-56,   Method: Composition-based stats.
 Identities = 57/149 (38%), Positives = 83/149 (55%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M    ++M  ALE A  AA  +E+PVGAV VLN+ I+    N+   L D +AHAE  AIR
Sbjct: 15  MTTDEIYMQRALELAHKAADEDEVPVGAVLVLNDMIVGEGYNQVITLSDPSAHAEAQAIR 74

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              + +    L +  LYVTLEPC MCA  I+ AR++RL +GA +P+ G      +     
Sbjct: 75  AAGKNVDNYRLTDSTLYVTLEPCAMCAGLITHARVKRLVFGAPDPRTGATGTAIEVLNHV 134

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
           + +H  E+  G+  +    I++ FF+ RR
Sbjct: 135 SMNHRVEVTSGVLAEPCGDILRQFFRARR 163


>gi|295094398|emb|CBK83489.1| Cytosine/adenosine deaminases [Coprococcus sp. ART55/1]
          Length = 169

 Score =  220 bits (562), Expect = 5e-56,   Method: Composition-based stats.
 Identities = 50/146 (34%), Positives = 77/146 (52%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
              +M  A+ +A+ A    ++P+G V V +++II+R  N+    K   AHAEILAI    
Sbjct: 17  HEKYMDKAIAQAKRAYANGDVPIGCVIVHDDRIIARGFNKRNLKKTTLAHAEILAIEQAS 76

Query: 64  RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123
           + L    L E  +YVTLEPC MCA AI  ARI  +  G  NPK G   +      +   +
Sbjct: 77  KKLGDWRLEECTMYVTLEPCQMCAGAIVQARIPNVVIGCMNPKAGCAGSIINLLDMKQFN 136

Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149
           H  E+  G+ +    ++++ FF++ R
Sbjct: 137 HQVEVIRGVRQDECSEMMKSFFRDLR 162


>gi|328472552|gb|EGF43415.1| tRNA-specific adenosine deaminase [Vibrio parahaemolyticus 10329]
          Length = 199

 Score =  220 bits (562), Expect = 5e-56,   Method: Composition-based stats.
 Identities = 55/147 (37%), Positives = 80/147 (54%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
           +  +FM  AL  A+ A L  E+PVGAV V + ++I+   NR+    D TAHAEI  +R  
Sbjct: 34  QDEIFMRRALALAEQAELEGEVPVGAVLVKDGEVIAEGWNRSICSHDATAHAEIQTLRNA 93

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
             +L    L +  LYVTLEPC MCA A+  +R++R+ +GA + K G        +     
Sbjct: 94  GAVLENYRLLDTTLYVTLEPCPMCAGALLHSRVKRVVFGAPDLKAGAAGTVLNLFESQAA 153

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H   +  G+ E   R+ +Q FFK RR
Sbjct: 154 YHYATVERGLLEDECREQLQAFFKRRR 180


>gi|320539250|ref|ZP_08038920.1| putative cytidine and deoxycytidylate deaminase zinc-binding
           protein [Serratia symbiotica str. Tucson]
 gi|320030642|gb|EFW12651.1| putative cytidine and deoxycytidylate deaminase zinc-binding
           protein [Serratia symbiotica str. Tucson]
          Length = 170

 Score =  220 bits (562), Expect = 5e-56,   Method: Composition-based stats.
 Identities = 59/151 (39%), Positives = 78/151 (51%), Gaps = 2/151 (1%)

Query: 1   MKK--GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           M K     +M  AL  A  A    E+PVGA+ VL+N++I    NR     D TAHAEI+A
Sbjct: 2   MTKYSDQYWMCQALRLALRAQEEGEVPVGALLVLDNQVIGEGWNRPIGRHDPTAHAEIMA 61

Query: 59  IRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
           +R G  +L    L    LYVTLEPC MCA A+  +RIRRL YG ++ K G   +      
Sbjct: 62  LRQGGAVLQNYRLLNATLYVTLEPCVMCAGAMVHSRIRRLVYGTADEKTGAAGSLMDILR 121

Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
               +H  EI  G+       ++  FF+ RR
Sbjct: 122 HPGMNHQVEIASGVLADECAAMLSHFFRLRR 152


>gi|225387328|ref|ZP_03757092.1| hypothetical protein CLOSTASPAR_01081 [Clostridium asparagiforme
           DSM 15981]
 gi|225046577|gb|EEG56823.1| hypothetical protein CLOSTASPAR_01081 [Clostridium asparagiforme
           DSM 15981]
          Length = 162

 Score =  220 bits (562), Expect = 5e-56,   Method: Composition-based stats.
 Identities = 53/149 (35%), Positives = 79/149 (53%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M     +M  A+ +A+ A+   E+P+G V V  +KII+R  NR    ++V +HAEI+AIR
Sbjct: 1   MTTDERYMKEAVRQAKKASALGEVPIGCVIVYEDKIIARGYNRRMVDQNVLSHAEIIAIR 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
             C+ +    L    LYVTLEPC MCA AI  AR+ ++  G  NPK G   +        
Sbjct: 61  KACKKMGDWRLENCTLYVTLEPCPMCAGAIVQARVPQVVIGCMNPKAGCAGSVLDMLHED 120

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  E   GI  +    ++++FF+  R
Sbjct: 121 GFNHQVETKIGILGEECSAMMKEFFRALR 149


>gi|205371946|ref|ZP_03224765.1| hypothetical protein Bcoam_00240 [Bacillus coahuilensis m4-4]
          Length = 160

 Score =  220 bits (562), Expect = 5e-56,   Method: Composition-based stats.
 Identities = 52/145 (35%), Positives = 78/145 (53%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
             FM  A+EEA  A    E+P+GAV V + ++I+   N     ++   HAE++AI+  C 
Sbjct: 4   EHFMKLAIEEALKAKEILEVPIGAVIVKDGEVIATGHNLRETTQNAITHAEVIAIQKACE 63

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
            L    L   +LYVTLEPC MC+ AI  +RI ++ YGA +PK G   +       +  +H
Sbjct: 64  KLGTWRLEGAELYVTLEPCPMCSGAIVQSRIEKVIYGAKDPKAGCAGSLMNLLQDSRFNH 123

Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149
             E+  GI E    +++  FF+E R
Sbjct: 124 QCEVEHGILEVECGELLSSFFRELR 148


>gi|51597197|ref|YP_071388.1| tRNA-specific adenosine deaminase [Yersinia pseudotuberculosis IP
           32953]
 gi|186896294|ref|YP_001873406.1| tRNA-specific adenosine deaminase [Yersinia pseudotuberculosis
           PB1/+]
 gi|51590479|emb|CAH22119.1| putative zinc-binding protein [Yersinia pseudotuberculosis IP
           32953]
 gi|186699320|gb|ACC89949.1| CMP/dCMP deaminase zinc-binding [Yersinia pseudotuberculosis PB1/+]
          Length = 187

 Score =  220 bits (562), Expect = 5e-56,   Method: Composition-based stats.
 Identities = 59/147 (40%), Positives = 77/147 (52%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
               +M  AL  A  A    E+PVGAV VL NK+I    NR     D TAHAEI+A+R G
Sbjct: 24  SDEYWMRHALTLALRAQEEGEVPVGAVLVLGNKVIGEGWNRPIRDNDPTAHAEIMALRQG 83

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
            + +    L +  LYVTLEPC MCA A+  +RIRRL YGA++ K G   +          
Sbjct: 84  GQAVQNYRLLDATLYVTLEPCVMCAGAMVHSRIRRLVYGANDVKTGAAGSLVDILRHPGM 143

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H  E+  GI        +  FF++RR
Sbjct: 144 NHQIEVSAGILATACSHQLSAFFRQRR 170


>gi|288554625|ref|YP_003426560.1| CMP/dCMP deaminase zinc-binding protein [Bacillus pseudofirmus OF4]
 gi|288545785|gb|ADC49668.1| CMP/dCMP deaminase zinc-binding protein [Bacillus pseudofirmus OF4]
          Length = 162

 Score =  220 bits (562), Expect = 6e-56,   Method: Composition-based stats.
 Identities = 54/148 (36%), Positives = 75/148 (50%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           +    +M  AL EA  A    E+P+GAV V + ++I+ A NR        AHAE+LAI+ 
Sbjct: 3   ETHEDWMKLALREADAAEQIGEVPIGAVIVKDGEVIAAAHNRRECDHQAIAHAELLAIKE 62

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
            C +L    L    LYVTLEPC MCA AI  +RI  + YGA++PK G             
Sbjct: 63  ACDVLGSWRLSGCTLYVTLEPCPMCAGAIVQSRIDLVVYGAADPKAGCAGTLMNLLDDPR 122

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H  E+  G  E    + +  FF++ R
Sbjct: 123 FNHRAEVISGCLETECGERLTAFFRKLR 150


>gi|188584656|ref|YP_001916201.1| tRNA-adenosine deaminase [Natranaerobius thermophilus JW/NM-WN-LF]
 gi|179349343|gb|ACB83613.1| tRNA-adenosine deaminase [Natranaerobius thermophilus JW/NM-WN-LF]
          Length = 158

 Score =  220 bits (561), Expect = 6e-56,   Method: Composition-based stats.
 Identities = 54/148 (36%), Positives = 85/148 (57%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
                +M  A+++A+ A  + E+P+GAV V + ++I+   N+    +D T+HAEI+AI+ 
Sbjct: 6   NTDKYWMQQAIDQAKLAYNKGEVPIGAVIVKDEQLIATGFNKRETSQDATSHAEIIAIQS 65

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
            C  L    L +  LYVT+EPC MCA AI  +RI +L +G  +PK  G  + +Q      
Sbjct: 66  ACNYLGGWRLLDCTLYVTIEPCPMCAGAILQSRITKLVFGTEDPKAWGELSISQLLQNPQ 125

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H  +I  GI ++ S+ II+ FF E R
Sbjct: 126 LNHQVDIVEGICKEESKDIIKQFFHELR 153


>gi|153001509|ref|YP_001367190.1| CMP/dCMP deaminase zinc-binding [Shewanella baltica OS185]
 gi|151366127|gb|ABS09127.1| CMP/dCMP deaminase zinc-binding [Shewanella baltica OS185]
          Length = 174

 Score =  220 bits (561), Expect = 6e-56,   Method: Composition-based stats.
 Identities = 52/149 (34%), Positives = 73/149 (48%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           MK    +M  A+  A+ A    E+PVGAV V +   I+   N +    D +AHAEIL +R
Sbjct: 9   MKLDEHWMQVAMLMAEKAEAEGEVPVGAVLVKDGLQIATGYNLSISQHDPSAHAEILCLR 68

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              R++    L +  LYVTLEPC MCA A+  +RI R+ +GA + K G            
Sbjct: 69  EAGRLVENYRLLDATLYVTLEPCAMCAGAMVHSRIARVVFGARDEKTGAAGTVVNLLQHP 128

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  E+  G+        +  FFK RR
Sbjct: 129 AFNHQVEVTSGVLADACSAQLSRFFKRRR 157


>gi|238762806|ref|ZP_04623775.1| tRNA-specific adenosine deaminase [Yersinia kristensenii ATCC
           33638]
 gi|238699111|gb|EEP91859.1| tRNA-specific adenosine deaminase [Yersinia kristensenii ATCC
           33638]
          Length = 194

 Score =  220 bits (561), Expect = 6e-56,   Method: Composition-based stats.
 Identities = 57/147 (38%), Positives = 78/147 (53%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
               +M  AL  A  A    E+PVGA+ VL+N++I    NR+    D TAHAEI+A+R G
Sbjct: 29  SDEYWMQRALVLALRAQAEGEVPVGAILVLDNQVIGEGWNRSIGDNDPTAHAEIMALRQG 88

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
            + +    L +  LYVTLEPC MCA A+  +RIRRL YGA++ K G   +          
Sbjct: 89  GQAVQNYRLIDATLYVTLEPCVMCAGAMVHSRIRRLVYGANDLKTGAAGSLVDILRHPGM 148

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H  EI  G+        +  FF+ RR
Sbjct: 149 NHQIEITAGVLADACSHQLSAFFRLRR 175


>gi|148981936|ref|ZP_01816576.1| cytosine/adenosine deaminase [Vibrionales bacterium SWAT-3]
 gi|145960698|gb|EDK26041.1| cytosine/adenosine deaminase [Vibrionales bacterium SWAT-3]
          Length = 181

 Score =  220 bits (561), Expect = 6e-56,   Method: Composition-based stats.
 Identities = 54/147 (36%), Positives = 82/147 (55%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
           +  +FM  A+E A+ A    E+PVGAV V + ++IS   NR+    D TAHAE+  +R  
Sbjct: 9   QDEIFMRRAIEVAKKAESEGEVPVGAVLVKDGEVISEGWNRSIGSHDATAHAEVETLRKA 68

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
            ++L    L +  LYVTLEPC MCA A+  +R++R+ +GA + K G        +     
Sbjct: 69  GQVLENYRLLDTTLYVTLEPCPMCAGALLHSRVKRIVFGAPDLKAGAAGTVLNLFESQAS 128

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H  ++  G+ E   R+ +Q FFK RR
Sbjct: 129 YHYADVEHGLLEDECREQLQAFFKRRR 155


>gi|332365217|gb|EGJ42980.1| tRNA-specific adenosine deaminase [Streptococcus sanguinis SK1059]
          Length = 179

 Score =  220 bits (561), Expect = 6e-56,   Method: Composition-based stats.
 Identities = 59/149 (39%), Positives = 85/149 (57%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +++   FM  AL+EA+ A   +EIP+G V V   KII R  N   EL+    HAEI+AI 
Sbjct: 29  IEEKEAFMREALKEAEIALAHDEIPIGCVLVKEGKIIGRGHNAREELQRAVMHAEIMAIE 88

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              R  +   L +  L+VT+EPC MC+ AI LARI  + YGA+N K G   +     T  
Sbjct: 89  EANRHENSWRLLDTTLFVTIEPCVMCSGAIGLARIPHVVYGAANQKFGAAGSLYDILTDE 148

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  E+  G+ ++   QI+Q+FF++RR
Sbjct: 149 RLNHRVEVEIGVLQEECAQIMQEFFRQRR 177


>gi|117919687|ref|YP_868879.1| tRNA-adenosine deaminase [Shewanella sp. ANA-3]
 gi|117612019|gb|ABK47473.1| tRNA-adenosine deaminase [Shewanella sp. ANA-3]
          Length = 222

 Score =  220 bits (561), Expect = 6e-56,   Method: Composition-based stats.
 Identities = 49/146 (33%), Positives = 69/146 (47%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
              +M  A+  A+ A    E+PVGAV V   + I+   N +    D  AHAEI  +R   
Sbjct: 59  DEHWMRVAMSMAEKAEAAGEVPVGAVLVKGGQQIAAGYNLSISEHDPCAHAEIQCLRAAG 118

Query: 64  RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123
           + +    L +  LYVTLEPC MCA A+  +RI R+ +GA + K G              +
Sbjct: 119 QTIENYRLLDTTLYVTLEPCAMCAGAMVHSRIARVVFGAKDEKTGAAGTVLNLLQHPAFN 178

Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149
           H  E+  G+  Q     +  FFK RR
Sbjct: 179 HQVEVTSGVLAQDCADQLSRFFKRRR 204


>gi|90407089|ref|ZP_01215278.1| hypothetical protein PCNPT3_02575 [Psychromonas sp. CNPT3]
 gi|90311811|gb|EAS39907.1| hypothetical protein PCNPT3_02575 [Psychromonas sp. CNPT3]
          Length = 182

 Score =  220 bits (561), Expect = 6e-56,   Method: Composition-based stats.
 Identities = 56/147 (38%), Positives = 75/147 (51%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
               +M  AL  A  A    E+PVGAV V +N++I+   N +    D  AHAE++A+R  
Sbjct: 21  NDEKWMQYALLLADKAEALGEVPVGAVLVKDNEVIAEGWNLSILSHDACAHAEVMAVREA 80

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
              L    L +  LYVTLEPC MCA A+  ARI+RL YGA + K G   +     +    
Sbjct: 81  GHKLQNYRLIDCTLYVTLEPCPMCAGALVHARIKRLVYGAPDLKTGAAGSVFNLLSHVKL 140

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H  +I  GI   +    I  FFK RR
Sbjct: 141 NHQVDITSGILSDQCSTKISQFFKRRR 167


>gi|330830279|ref|YP_004393231.1| CMP/dCMP deaminase zinc-binding protein [Aeromonas veronii B565]
 gi|328805415|gb|AEB50614.1| CMP/dCMP deaminase zinc-binding protein [Aeromonas veronii B565]
          Length = 201

 Score =  220 bits (561), Expect = 6e-56,   Method: Composition-based stats.
 Identities = 53/148 (35%), Positives = 79/148 (53%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           ++   +M  A+  A  A    EIPVGAV VL+ +++    NR+    D  AHAE++AIR 
Sbjct: 36  EQDEQWMRHAMALAARAEGIGEIPVGAVLVLDGQVVGEGWNRSISEHDACAHAEVMAIRA 95

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
             + L+   L +  LYVTLEPC MCA A+  +R++R+ YGA + K G   +  +      
Sbjct: 96  AGKQLANYRLLDTTLYVTLEPCCMCAGALIHSRVKRVVYGARDLKTGAAGSVFEILQDPR 155

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +HS E+  G+        +  FFK RR
Sbjct: 156 HNHSVELIGGVLADACSAQLSAFFKRRR 183


>gi|254509189|ref|ZP_05121287.1| tRNA-specific adenosine deaminase [Vibrio parahaemolyticus 16]
 gi|219547894|gb|EED24921.1| tRNA-specific adenosine deaminase [Vibrio parahaemolyticus 16]
          Length = 187

 Score =  220 bits (561), Expect = 7e-56,   Method: Composition-based stats.
 Identities = 53/147 (36%), Positives = 81/147 (55%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
           +   +M  A+E A +A    E+PVGAV V + +II+   N++    D TAHAE+  IR  
Sbjct: 16  QDEQYMRRAMELAAHAETEGEVPVGAVLVKDGEIIAEGWNQSIGCHDATAHAEMQTIRKA 75

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
            ++L    L +  LYVTLEPC MCA A+  +R++R+ +GA + K G        +     
Sbjct: 76  GQVLENYRLLDTTLYVTLEPCPMCAGALLHSRVKRVVFGAPDLKAGAAGTVLNLFEHQAA 135

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H  ++  G+ E+  R  +Q FFK RR
Sbjct: 136 YHYADVEQGLLEEECRVQLQSFFKRRR 162


>gi|238793763|ref|ZP_04637384.1| tRNA-specific adenosine deaminase [Yersinia intermedia ATCC 29909]
 gi|238726827|gb|EEQ18360.1| tRNA-specific adenosine deaminase [Yersinia intermedia ATCC 29909]
          Length = 181

 Score =  220 bits (561), Expect = 7e-56,   Method: Composition-based stats.
 Identities = 57/147 (38%), Positives = 79/147 (53%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
               +M  AL  A  A    E+PVGAV VL N++I    N++    D TAHAEI+A+R G
Sbjct: 18  SDEYWMQRALTLALRAQNEGEVPVGAVLVLGNQVIGEGWNKSIRDNDPTAHAEIMALRQG 77

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
            +++    L E  LYVTLEPC MCA A+  +RIRRL YGA++ K G   +          
Sbjct: 78  GQVVQNYRLLEATLYVTLEPCVMCAGAMIHSRIRRLVYGANDLKTGAAGSLVDILHHPGM 137

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H  E+  G+  +     +  FF+ RR
Sbjct: 138 NHQIEVSAGVLAETCSHQLSAFFRLRR 164


>gi|160882011|ref|YP_001560979.1| CMP/dCMP deaminase zinc-binding [Clostridium phytofermentans ISDg]
 gi|160430677|gb|ABX44240.1| CMP/dCMP deaminase zinc-binding [Clostridium phytofermentans ISDg]
          Length = 161

 Score =  220 bits (561), Expect = 7e-56,   Method: Composition-based stats.
 Identities = 56/149 (37%), Positives = 83/149 (55%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M +   +M  A+ +A+ AAL  E+P+G V V +NKII+R  N+    K   AHAEILAI 
Sbjct: 1   MDEKIKYMKAAIVQAKKAALIGEVPIGCVIVYDNKIIARGYNKRNTKKTTLAHAEILAIE 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              R L+   L    +YVTLEPC MC+ AI  +R+ R+  G+ NPK G   +      + 
Sbjct: 61  KASRYLNDWRLEGCTMYVTLEPCQMCSGAIVQSRMDRVVIGSMNPKAGCAGSILNLLQME 120

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  E+  G+ ++   +++QDFF   R
Sbjct: 121 QFNHQVELETGVMQEECTKLLQDFFVMLR 149


>gi|303258084|ref|ZP_07344092.1| cytidine/deoxycytidylate deaminase family protein [Burkholderiales
           bacterium 1_1_47]
 gi|330998703|ref|ZP_08322432.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Parasutterella excrementihominis YIT 11859]
 gi|302859103|gb|EFL82186.1| cytidine/deoxycytidylate deaminase family protein [Burkholderiales
           bacterium 1_1_47]
 gi|329576442|gb|EGG57954.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Parasutterella excrementihominis YIT 11859]
          Length = 281

 Score =  219 bits (560), Expect = 7e-56,   Method: Composition-based stats.
 Identities = 57/149 (38%), Positives = 79/149 (53%), Gaps = 1/149 (0%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIR 60
            +   FM  AL EA+ A    E+PVGAV V    KII R  N      D + HAEI+A++
Sbjct: 125 SRDEYFMREALVEAEKAHQAGEVPVGAVVVDKEGKIIGRGHNLVVAGHDPSGHAEIIALK 184

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              + L    L    +YVTLEPC MC+ AI  AR+ RL YGA + K G  E+  + +   
Sbjct: 185 NASQNLKNYRLDNCTIYVTLEPCPMCSGAIIGARLARLVYGAKDQKAGAAESVFKLFDEK 244

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  ++  G+ E+   +I+Q FF E R
Sbjct: 245 RVNHHTDVTAGVLEEDCLRILQSFFVELR 273


>gi|332883068|gb|EGK03352.1| hypothetical protein HMPREF9456_01989 [Dysgonomonas mossii DSM
           22836]
          Length = 148

 Score =  219 bits (560), Expect = 7e-56,   Method: Composition-based stats.
 Identities = 52/147 (35%), Positives = 82/147 (55%), Gaps = 5/147 (3%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
             + +M  AL EA+ A  + E+P+GAV V   +II+R  N    L DVTAHAE+ AI   
Sbjct: 7   NDDYYMRQALNEARQAFDKGEVPIGAVVVCKGRIIARGHNLTETLTDVTAHAEMQAITAA 66

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
             +L  + L +  LYVT+EPC MCA  +  ++I ++ YGA + K G        ++ +  
Sbjct: 67  ANVLGGKYLTDCILYVTIEPCPMCAGGLLWSQISKIVYGAKDEKKG-----YSVFSPSIL 121

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           H   E+  G+ E     ++++FFK++R
Sbjct: 122 HPKTEVVSGVMEDECASLMKEFFKQKR 148


>gi|225628666|ref|ZP_03786700.1| cytidine and deoxycytidylate deaminase family protein [Brucella
           ceti str. Cudo]
 gi|237816711|ref|ZP_04595703.1| cytidine and deoxycytidylate deaminase family protein [Brucella
           abortus str. 2308 A]
 gi|225616512|gb|EEH13560.1| cytidine and deoxycytidylate deaminase family protein [Brucella
           ceti str. Cudo]
 gi|237787524|gb|EEP61740.1| cytidine and deoxycytidylate deaminase family protein [Brucella
           abortus str. 2308 A]
          Length = 171

 Score =  219 bits (560), Expect = 7e-56,   Method: Composition-based stats.
 Identities = 93/142 (65%), Positives = 110/142 (77%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  ALEEA  A  R E+P+GAV V + +II+RAGNR RE  DVTAHAEIL IR    +L 
Sbjct: 30  MDIALEEAHAAGERGEVPIGAVIVRDGEIIARAGNRTREFNDVTAHAEILTIRQAGEMLG 89

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
            E L + DLYVTLEPC MCAAAIS ARIRRLYYGAS+PKGGGIE+G +FYT  TCHH+PE
Sbjct: 90  SERLIDCDLYVTLEPCAMCAAAISFARIRRLYYGASDPKGGGIEHGGRFYTQPTCHHAPE 149

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
           IYPG  E  +R+I++DFF+E+R
Sbjct: 150 IYPGFCEADARKILKDFFREKR 171


>gi|218289065|ref|ZP_03493302.1| CMP/dCMP deaminase zinc-binding [Alicyclobacillus acidocaldarius
           LAA1]
 gi|218240890|gb|EED08068.1| CMP/dCMP deaminase zinc-binding [Alicyclobacillus acidocaldarius
           LAA1]
          Length = 156

 Score =  219 bits (560), Expect = 7e-56,   Method: Composition-based stats.
 Identities = 65/151 (43%), Positives = 89/151 (58%), Gaps = 2/151 (1%)

Query: 1   MKK--GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           M++     FM  ALE A+ AA   E+PVGAV V N +I+    NR    +D TAHAE+LA
Sbjct: 2   MEQAADERFMRRALELAEEAARWGEVPVGAVVVENGRIVGEGFNRRETWRDGTAHAEMLA 61

Query: 59  IRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
           I    R L    L    LYVTLEPC MCA AI L+R++RL YGA++ KGG + +  +   
Sbjct: 62  IEEASRRLGGWRLTNCVLYVTLEPCPMCAGAIVLSRVQRLVYGATDAKGGAVASKVRLLE 121

Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
               +H+P+I  GI      +++ DFF++RR
Sbjct: 122 PGLWNHAPQITSGILADDCAKLLTDFFRKRR 152


>gi|153948638|ref|YP_001400126.1| tRNA-specific adenosine deaminase [Yersinia pseudotuberculosis IP
           31758]
 gi|152960133|gb|ABS47594.1| tRNA-specific adenosine deaminase [Yersinia pseudotuberculosis IP
           31758]
          Length = 200

 Score =  219 bits (560), Expect = 8e-56,   Method: Composition-based stats.
 Identities = 59/147 (40%), Positives = 77/147 (52%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
               +M  AL  A  A    E+PVGAV VL NK+I    NR     D TAHAEI+A+R G
Sbjct: 37  SDEYWMRHALTLALRAQEEGEVPVGAVLVLGNKVIGEGWNRPIRDNDPTAHAEIMALRQG 96

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
            + +    L +  LYVTLEPC MCA A+  +RIRRL YGA++ K G   +          
Sbjct: 97  GQAVQNYRLLDATLYVTLEPCVMCAGAMVHSRIRRLVYGANDVKTGAAGSLVDILRHPGM 156

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H  E+  GI        +  FF++RR
Sbjct: 157 NHQIEVSAGILATACSHQLSAFFRQRR 183


>gi|153813521|ref|ZP_01966189.1| hypothetical protein RUMOBE_03942 [Ruminococcus obeum ATCC 29174]
 gi|149830392|gb|EDM85484.1| hypothetical protein RUMOBE_03942 [Ruminococcus obeum ATCC 29174]
          Length = 164

 Score =  219 bits (560), Expect = 8e-56,   Method: Composition-based stats.
 Identities = 51/142 (35%), Positives = 76/142 (53%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  A+ +A+ A    E+P+G V V + KII+R  NR    K+  +HAE+ AIR   + L 
Sbjct: 1   MKEAIRQAKKARALEEVPIGCVIVSDGKIIARGYNRRNTDKNTLSHAELNAIRKASKKLG 60

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
              L    +YVTLEPC MCA A+  +RI  +  G+ NPK G   +      +   +H  +
Sbjct: 61  DWRLEGCTMYVTLEPCQMCAGALVQSRIDEVVIGSMNPKAGCAGSVLNLLQVDNFNHQVK 120

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
           I  G+ E+    ++ DFF+E R
Sbjct: 121 ITRGVLEEECSMMLSDFFRELR 142


>gi|254490420|ref|ZP_05103607.1| Cytidine and deoxycytidylate deaminase zinc-binding region domain
           protein [Methylophaga thiooxidans DMS010]
 gi|224464386|gb|EEF80648.1| Cytidine and deoxycytidylate deaminase zinc-binding region domain
           protein [Methylophaga thiooxydans DMS010]
          Length = 149

 Score =  219 bits (560), Expect = 8e-56,   Method: Composition-based stats.
 Identities = 59/149 (39%), Positives = 86/149 (57%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M     +M  AL  AQ A    E+PVGAV VLNN+II    N+     D TAHAEI+A+R
Sbjct: 1   MSDEIRWMQRALALAQRAEAEGEVPVGAVIVLNNEIIGEGWNQPISANDATAHAEIIALR 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
             C++++   LP  D+Y+TLEPC MCA A+  ARI ++ Y  + PK G   +    +TL 
Sbjct: 61  QACQLMNNYRLPGADMYITLEPCAMCAGALVHARINKVVYATAEPKTGAAGSCVDIFTLP 120

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H      G+  ++S Q+++ FF+ +R
Sbjct: 121 NLNHRVSTESGLLAEQSSQLLRQFFRGKR 149


>gi|153837700|ref|ZP_01990367.1| tRNA-specific adenosine deaminase [Vibrio parahaemolyticus AQ3810]
 gi|260366298|ref|ZP_05778754.1| tRNA-specific adenosine deaminase [Vibrio parahaemolyticus K5030]
 gi|260876398|ref|ZP_05888753.1| tRNA-specific adenosine deaminase [Vibrio parahaemolyticus AN-5034]
 gi|308095607|ref|ZP_05907165.2| tRNA-specific adenosine deaminase [Vibrio parahaemolyticus
           Peru-466]
 gi|308126068|ref|ZP_05907632.2| tRNA-specific adenosine deaminase [Vibrio parahaemolyticus AQ4037]
 gi|149748895|gb|EDM59726.1| tRNA-specific adenosine deaminase [Vibrio parahaemolyticus AQ3810]
 gi|308086905|gb|EFO36600.1| tRNA-specific adenosine deaminase [Vibrio parahaemolyticus
           Peru-466]
 gi|308092990|gb|EFO42685.1| tRNA-specific adenosine deaminase [Vibrio parahaemolyticus AN-5034]
 gi|308106632|gb|EFO44172.1| tRNA-specific adenosine deaminase [Vibrio parahaemolyticus AQ4037]
 gi|308112714|gb|EFO50254.1| tRNA-specific adenosine deaminase [Vibrio parahaemolyticus K5030]
          Length = 174

 Score =  219 bits (560), Expect = 8e-56,   Method: Composition-based stats.
 Identities = 55/147 (37%), Positives = 80/147 (54%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
           +  +FM  AL  A+ A L  E+PVGAV V + ++I+   NR+    D TAHAEI  +R  
Sbjct: 9   QDEIFMRRALALAEQAELEGEVPVGAVLVKDGEVIAEGWNRSICSHDATAHAEIQTLRNA 68

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
             +L    L +  LYVTLEPC MCA A+  +R++R+ +GA + K G        +     
Sbjct: 69  GAVLENYRLLDTTLYVTLEPCPMCAGALLHSRVKRVVFGAPDLKAGAAGTVLNLFESQAA 128

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H   +  G+ E   R+ +Q FFK RR
Sbjct: 129 YHYATVEKGLLEDECREQLQAFFKRRR 155


>gi|327472530|gb|EGF17961.1| tRNA-specific adenosine deaminase [Streptococcus sanguinis SK408]
          Length = 156

 Score =  219 bits (560), Expect = 8e-56,   Method: Composition-based stats.
 Identities = 60/149 (40%), Positives = 85/149 (57%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +++   FM  AL+EA+ A   +EIP+G V V   KII R  N   EL+    HAEI+AI 
Sbjct: 6   IEEKEAFMREALKEAEIALAHDEIPIGCVLVKEGKIIGRGHNAREELQRAVMHAEIMAIE 65

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              R  +   L +  L+VT+EPC MC+ AI LARI  + YGASN K G   +     T  
Sbjct: 66  EANRHENSWRLLDTTLFVTIEPCVMCSGAIGLARIPHVVYGASNQKFGAAGSLYDILTDE 125

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  E+  G+ ++   QI+Q+FF++RR
Sbjct: 126 RLNHRVEVETGVLQEECAQIMQEFFRQRR 154


>gi|308171910|ref|YP_003918615.1| tRNA specific adenosine deaminase [Bacillus amyloliquefaciens DSM
           7]
 gi|307604774|emb|CBI41145.1| tRNA specific adenosine deaminase [Bacillus amyloliquefaciens DSM
           7]
 gi|328551718|gb|AEB22210.1| tRNA specific adenosine deaminase [Bacillus amyloliquefaciens
           TA208]
 gi|328909978|gb|AEB61574.1| tRNA specific adenosine deaminase [Bacillus amyloliquefaciens LL3]
          Length = 160

 Score =  219 bits (560), Expect = 8e-56,   Method: Composition-based stats.
 Identities = 53/143 (37%), Positives = 82/143 (57%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
               +M  A++EA+ A  + E+P+GAV VL+++I++RA N     +   AHAE+LAI   
Sbjct: 2   NDEYYMREAIKEAKKAEAKGEVPIGAVLVLHDEIVARAHNLRETEQRSLAHAEMLAIDEA 61

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
           CR L    L +  LYVTLEPC MCA A+ L+R+ ++ +GA +PKGG              
Sbjct: 62  CRKLGTWRLEDAVLYVTLEPCPMCAGAVVLSRVDKVVFGAFDPKGGCTGTLMNLLQEERF 121

Query: 123 HHSPEIYPGISEQRSRQIIQDFF 145
           +H  E+  G+ E+   +++  FF
Sbjct: 122 NHQAEVVSGVLEEECGEMLSAFF 144


>gi|253988801|ref|YP_003040157.1| tRNA -specific adenosine deaminase [Photorhabdus asymbiotica subsp.
           asymbiotica ATCC 43949]
 gi|253780251|emb|CAQ83412.1| similar to ecoli yfhc protein, tRNA-specific adenosine deaminase
           [Photorhabdus asymbiotica]
          Length = 169

 Score =  219 bits (560), Expect = 9e-56,   Method: Composition-based stats.
 Identities = 58/147 (39%), Positives = 81/147 (55%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
               +M  A+E A  A  + EIPVGAV V +N+II+   N++    D +AHAE++A+R G
Sbjct: 6   SDEYWMQQAMERAIKAWEQGEIPVGAVLVADNEIIAEGWNQSIIAHDPSAHAEVIALRKG 65

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
              L    L    LYVTLEPC MCA A+  +RI+RL YGAS+ K G   +          
Sbjct: 66  GEQLQNYRLLNTTLYVTLEPCAMCAGAMIHSRIQRLVYGASDMKTGAAGSLIDILRHPGM 125

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H  EI  G+  +    ++  FFK+RR
Sbjct: 126 NHQIEITGGVLAEACSTMLSVFFKQRR 152


>gi|89892755|ref|YP_516242.1| hypothetical protein DSY0009 [Desulfitobacterium hafniense Y51]
 gi|219666080|ref|YP_002456515.1| CMP/dCMP deaminase zinc-binding [Desulfitobacterium hafniense
           DCB-2]
 gi|89332203|dbj|BAE81798.1| hypothetical protein [Desulfitobacterium hafniense Y51]
 gi|219536340|gb|ACL18079.1| CMP/dCMP deaminase zinc-binding [Desulfitobacterium hafniense
           DCB-2]
          Length = 148

 Score =  219 bits (560), Expect = 9e-56,   Method: Composition-based stats.
 Identities = 60/147 (40%), Positives = 89/147 (60%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
               +M  ALEEA+ A  + E+P+GAV V   +II+RA N     +D TAHAE+LA++  
Sbjct: 2   NHQDYMRLALEEAEIAFAQGEVPIGAVVVHKGEIIARAHNEKELRQDPTAHAEVLAVQRA 61

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
            + L    L E  LYVTLEPC MCA ++  AR++ L +GA++ KGG + + T    +   
Sbjct: 62  TQALGIWRLSEATLYVTLEPCPMCAGSLVQARLKTLVFGAADLKGGAVGSVTNVLDVNRW 121

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H  E+  GI E+   QI++DFF++ R
Sbjct: 122 NHRVEVVAGILEEECAQILKDFFRKLR 148


>gi|332305596|ref|YP_004433447.1| CMP/dCMP deaminase zinc-binding protein [Glaciecola agarilytica
           4H-3-7+YE-5]
 gi|332172925|gb|AEE22179.1| CMP/dCMP deaminase zinc-binding protein [Glaciecola agarilytica
           4H-3-7+YE-5]
          Length = 162

 Score =  219 bits (560), Expect = 9e-56,   Method: Composition-based stats.
 Identities = 54/149 (36%), Positives = 80/149 (53%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +++  ++M  AL  A  AA   EIPVGAV V + ++I    N++  L D +AHAE+ AIR
Sbjct: 3   LEQDQLWMRHALALATKAADAGEIPVGAVLVKDQQVIGEGWNQSIMLNDPSAHAEMQAIR 62

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
                +    L    LYVTLEPCTMCA  +  +RI RL +GA + K G   +        
Sbjct: 63  QAGEFIQNYRLIGTTLYVTLEPCTMCAGLLVHSRIERLVFGAHDAKTGAAGSIMDVLRDT 122

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  E+  G+  ++  + I  FF++RR
Sbjct: 123 RLNHQVEVVGGVLGEQCGETISAFFRKRR 151


>gi|323499761|ref|ZP_08104720.1| tRNA-specific adenosine-34 deaminase [Vibrio sinaloensis DSM 21326]
 gi|323315002|gb|EGA68054.1| tRNA-specific adenosine-34 deaminase [Vibrio sinaloensis DSM 21326]
          Length = 179

 Score =  219 bits (560), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 53/147 (36%), Positives = 81/147 (55%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
           +  +FM  A++ A+ A    E+PVGAV V + +II+   N++    D TAHAEI  +R  
Sbjct: 9   QDELFMRRAMDLAKQAEAEGEVPVGAVLVKDGEIIAEGWNQSIGQNDATAHAEIQTLRKA 68

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
            ++L    L +  LYVTLEPC MCA A+  +R++R+ +GA + K G        +     
Sbjct: 69  GQVLENYRLLDTTLYVTLEPCPMCAGALLHSRVKRIVFGAPDLKAGAAGTVLNLFEHQAA 128

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H  ++  G+ E   R  +Q FFK RR
Sbjct: 129 YHYADVERGLLETECRTQLQAFFKRRR 155


>gi|315125849|ref|YP_004067852.1| tRNA-specific adenosine deaminase [Pseudoalteromonas sp. SM9913]
 gi|315014363|gb|ADT67701.1| tRNA-specific adenosine deaminase [Pseudoalteromonas sp. SM9913]
          Length = 168

 Score =  219 bits (560), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 56/147 (38%), Positives = 84/147 (57%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
               +M  AL  A+ A   +EIPVGA+ V +N++IS   NR+    D +AHAE++A+R  
Sbjct: 6   DDQYWMEQALVYAKQAEQLDEIPVGAIIVKDNQLISAGYNRSITDNDPSAHAEMIAVREA 65

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
            ++L+   L +  LYVTLEPC+MCA  +  +RI+RL +GA++ K G   +          
Sbjct: 66  GKVLNNYRLIDCTLYVTLEPCSMCAGLLVHSRIKRLVFGAADAKTGSAGSIMNLLQEPRL 125

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H  EI  G+ E +  + I  FFK RR
Sbjct: 126 NHQVEITGGVLETQCAETISSFFKRRR 152


>gi|153830778|ref|ZP_01983445.1| zinc-binding domain protein [Vibrio cholerae 623-39]
 gi|148873734|gb|EDL71869.1| zinc-binding domain protein [Vibrio cholerae 623-39]
          Length = 193

 Score =  219 bits (560), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 55/147 (37%), Positives = 79/147 (53%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
           +   FM  A+  A  A  + E+PVGAV V + +II+   N +    D TAHAEI  IR  
Sbjct: 27  QDEQFMRRAIALATQAEAQGEVPVGAVLVRDGEIIAEGWNGSITNHDATAHAEIEVIRKA 86

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
            + LS   L +  LYVTLEPC MCA A+  +R++R+ YGA + K G        ++    
Sbjct: 87  GKALSNYRLLDTTLYVTLEPCPMCAGALLHSRVKRIVYGAPDLKAGAAGTVMDLFSSQAA 146

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H   +  G+ E+  R  +Q FF+ RR
Sbjct: 147 YHYATVEKGLLEEECRAQLQAFFQRRR 173


>gi|27363814|ref|NP_759342.1| tRNA-specific adenosine-34 deaminase [Vibrio vulnificus CMCP6]
 gi|27359931|gb|AAO08869.1| tRNA-specific adenosine-34 deaminase [Vibrio vulnificus CMCP6]
          Length = 181

 Score =  219 bits (560), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 55/147 (37%), Positives = 80/147 (54%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
           +  VFM  A+E A  A    E+PVGAV V + ++I+   N++    D TAHAEI  +R  
Sbjct: 11  QDEVFMRRAIELAAIAESEGEVPVGAVLVKDGEVIAEGWNQSIGQHDATAHAEIQTLRQA 70

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
            + L    L +  LYVTLEPC MCA A+  +R++R+ +GA + K G        ++    
Sbjct: 71  GQSLGNYRLLDTTLYVTLEPCPMCAGALLHSRVKRIVFGAPDLKAGAAGTVLDLFSSQAA 130

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H   I  G+ E   R+ +Q FFK RR
Sbjct: 131 YHYATIEKGLLELECREQLQAFFKRRR 157


>gi|307704429|ref|ZP_07641340.1| tRNA-specific adenosine deaminase [Streptococcus mitis SK597]
 gi|307707916|ref|ZP_07644391.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus
           mitis NCTC 12261]
 gi|307615981|gb|EFN95179.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus
           mitis NCTC 12261]
 gi|307622002|gb|EFO01028.1| tRNA-specific adenosine deaminase [Streptococcus mitis SK597]
          Length = 155

 Score =  219 bits (559), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 60/148 (40%), Positives = 79/148 (53%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           ++  VFM  AL EA+ A   +EIP+G V V + +II R  N   EL+    HAEI+AI  
Sbjct: 6   EEKEVFMREALREAEIALEHDEIPIGCVIVKDGEIIGRGHNAREELQRAVMHAEIMAIEN 65

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
                    L +  L+VT+EPC MC+ AI LARI  + YGA N K G   +     T   
Sbjct: 66  ANLSEESWRLLDCTLFVTIEPCVMCSGAIGLARIPNVVYGAKNQKFGAAGSLYDILTDER 125

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H  E+  GI E     I+QDFF+ RR
Sbjct: 126 LNHRVEVETGILEDECAAIMQDFFRNRR 153


>gi|262040295|ref|ZP_06013546.1| tRNA-specific adenosine deaminase [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
 gi|259042404|gb|EEW43424.1| tRNA-specific adenosine deaminase [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
          Length = 180

 Score =  219 bits (559), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 57/147 (38%), Positives = 77/147 (52%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
               +M  AL  A+ A    E+PVGAV V NN++I    NR     D TAHAEI+A+R G
Sbjct: 18  NDEYWMRHALTLAKRAWEEGEVPVGAVLVHNNQVIGEGWNRPIGRHDPTAHAEIMALRQG 77

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
             +L    L +  LYVTLEPC MCA A+  +RI RL +GA + K G   +          
Sbjct: 78  GLVLQNYRLIDATLYVTLEPCVMCAGAMVHSRIARLVFGARDAKTGAAGSLMDVLHHPGM 137

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H   I  G+  +    ++ DFF+ RR
Sbjct: 138 NHRVAISEGVLAESCSAMLSDFFRWRR 164


>gi|15902066|ref|NP_357616.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus
           pneumoniae R6]
 gi|116516620|ref|YP_815440.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus
           pneumoniae D39]
 gi|148987738|ref|ZP_01819201.1| adenylosuccinate synthetase [Streptococcus pneumoniae SP6-BS73]
 gi|15457551|gb|AAK98826.1| Conserved hypothetical protein [Streptococcus pneumoniae R6]
 gi|116077196|gb|ABJ54916.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus
           pneumoniae D39]
 gi|147926202|gb|EDK77275.1| adenylosuccinate synthetase [Streptococcus pneumoniae SP6-BS73]
          Length = 155

 Score =  219 bits (559), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 60/149 (40%), Positives = 80/149 (53%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +++  VFM  AL EA+ A   +EIP+G V V + +II R  N   EL+    HAEI+AI 
Sbjct: 5   LEEKEVFMREALREAEIALEHDEIPIGCVIVKDGEIIGRGHNAREELQRAVMHAEIMAIE 64

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
                     L +  L+VT+EPC MC+ AI LARI  + YGA N K G   +     T  
Sbjct: 65  DANLSEESWRLLDCTLFVTIEPCVMCSGAIGLARIPNVVYGAKNQKFGAAGSLYDILTDE 124

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  E+  GI E     I+QDFF+ RR
Sbjct: 125 RLNHRVEVETGILEDECAAIMQDFFRNRR 153


>gi|238796745|ref|ZP_04640251.1| tRNA-specific adenosine deaminase [Yersinia mollaretii ATCC 43969]
 gi|238719476|gb|EEQ11286.1| tRNA-specific adenosine deaminase [Yersinia mollaretii ATCC 43969]
          Length = 181

 Score =  219 bits (559), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 58/147 (39%), Positives = 78/147 (53%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
               +M  A+  A  A    E+PVGAV VL+N++I    NR+    D TAHAEI+A+R G
Sbjct: 18  SDEYWMQRAMTLALRAQEEGEVPVGAVLVLDNQVIGEGWNRSIRDNDPTAHAEIMALRQG 77

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
            + +    L E  LYVTLEPC MCA A+  +RIRRL YGA++ K G   +          
Sbjct: 78  GQAVQNYRLLEATLYVTLEPCVMCAGAMVHSRIRRLVYGANDLKTGAAGSLVDILRHPGM 137

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H  EI  G+        +  FF+ RR
Sbjct: 138 NHQVEISAGVLADACSHQLSAFFRLRR 164


>gi|306828458|ref|ZP_07461653.1| tRNA-specific adenosine deaminase [Streptococcus mitis ATCC 6249]
 gi|304429257|gb|EFM32342.1| tRNA-specific adenosine deaminase [Streptococcus mitis ATCC 6249]
          Length = 155

 Score =  219 bits (559), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 60/148 (40%), Positives = 80/148 (54%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           ++   FM  AL EA+ A   +EIP+G V V + +IISR  N   EL+    HAEI+AI  
Sbjct: 6   EEKESFMREALREAEIALEHDEIPIGCVIVKDGEIISRGHNAREELQRAVMHAEIMAIEN 65

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
                    L +  L+VT+EPC MC+ AI LARI ++ YGA N K G   +     T   
Sbjct: 66  ANLSEESWRLLDCTLFVTIEPCVMCSGAIGLARIPKVVYGAKNQKFGAAGSLYDILTDER 125

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H  E+  GI E     I+QDFF+ RR
Sbjct: 126 LNHRVEVETGILEDECAGIMQDFFRNRR 153


>gi|300362312|ref|ZP_07058488.1| cytidine/deoxycytidylate deaminase [Lactobacillus gasseri JV-V03]
 gi|300353303|gb|EFJ69175.1| cytidine/deoxycytidylate deaminase [Lactobacillus gasseri JV-V03]
          Length = 160

 Score =  219 bits (559), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 50/149 (33%), Positives = 86/149 (57%), Gaps = 1/149 (0%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIR 60
                +M  A  +A+ A  + E+P+GA+ V  +  +I    NR    +D T HAE++AIR
Sbjct: 5   SDKEEYMQLAFAQAKKAEDQGEVPIGAIVVDKDGNVIGEGYNRRELDEDATQHAEMIAIR 64

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
             C+ L    L +  L++TLEPC MC+ AI  +R+  +YYGA +PK G   +    + + 
Sbjct: 65  EACKNLGSWRLVDCSLFITLEPCPMCSGAIINSRLAEVYYGAFDPKAGAAGSVIDLFKVE 124

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H P+++ G+ + ++ Q+++DFF+E R
Sbjct: 125 KFNHHPQVFGGLFKDQAAQMLKDFFREIR 153


>gi|297170608|gb|ADI21634.1| cytosine/adenosine deaminases [uncultured myxobacterium
           HF0130_06F04]
          Length = 159

 Score =  219 bits (559), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 53/149 (35%), Positives = 79/149 (53%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M +   +M  A  EA+ A    E+PVGA+ +  ++++ R  NR     D  AHAEILAI 
Sbjct: 1   MGRDESWMQAAFAEAEKARALGEVPVGALVIYEDRVVGRGFNRRETDHDPLAHAEILAIG 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              + L +  L   +LYVTLEPC MCA AI  +R+ RL +GA++P+ G            
Sbjct: 61  EAAKTLGRWRLSGCELYVTLEPCPMCAGAIVNSRLDRLVFGATDPRAGAAGTVFDIVRDQ 120

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  E+  G+  +   +I+ DFF + R
Sbjct: 121 RLNHQVEVVSGVLGEPCSRILSDFFADLR 149


>gi|307710059|ref|ZP_07646503.1| tRNA-specific adenosine deaminase [Streptococcus mitis SK564]
 gi|307619039|gb|EFN98171.1| tRNA-specific adenosine deaminase [Streptococcus mitis SK564]
          Length = 155

 Score =  219 bits (559), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 61/148 (41%), Positives = 79/148 (53%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           ++  VFM  AL EA+ A   +EIP+G V V + KII R  N   EL+    HAEI+AI  
Sbjct: 6   EEKEVFMREALREAEIALEHDEIPIGCVIVKDGKIIGRGHNAREELQRAVMHAEIMAIEN 65

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
                    L +  L+VT+EPC MC+ AI LARI  + YGA N K G   +     T   
Sbjct: 66  ANLREESWRLLDCTLFVTIEPCVMCSGAIGLARIPNVVYGAKNQKFGAAGSLYDILTDER 125

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H  E+  GI E     I+QDFF+ RR
Sbjct: 126 LNHRVEVETGILEDECAAIMQDFFRNRR 153


>gi|121533374|ref|ZP_01665202.1| CMP/dCMP deaminase, zinc-binding [Thermosinus carboxydivorans Nor1]
 gi|121307933|gb|EAX48847.1| CMP/dCMP deaminase, zinc-binding [Thermosinus carboxydivorans Nor1]
          Length = 149

 Score =  219 bits (559), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 56/147 (38%), Positives = 87/147 (59%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
               +M  ALEEA+ A    E+P+GAV V++  ++++A NR     D TAHAEI+ I+  
Sbjct: 2   DDYDYMGIALEEARKAYAIGEVPIGAVLVMDGAVVAKAHNRRETWHDATAHAEIIVIQQA 61

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
           C++L +  L    LYVT+EPC MCA A+  +RI RL YG+++ K G +E+          
Sbjct: 62  CKLLGRWRLTGAALYVTIEPCPMCAGALVNSRIDRLVYGSADYKAGAVESLFNIVQHPAL 121

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H  E+  G+      +I++DFF++RR
Sbjct: 122 NHRLEVTAGVRADECAEIMRDFFRQRR 148


>gi|116874087|ref|YP_850868.1| cytidine/deoxycytidylate deaminase zinc-binding domain-containing
           protein [Listeria welshimeri serovar 6b str. SLCC5334]
 gi|116742965|emb|CAK22089.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein
           [Listeria welshimeri serovar 6b str. SLCC5334]
          Length = 156

 Score =  219 bits (559), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 58/144 (40%), Positives = 85/144 (59%)

Query: 6   VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
            FM  AL EA+ A    E+P+GAV VL+ +II RA N     ++   HAE+LAI+  C+ 
Sbjct: 5   FFMQQALAEAEKAQEIGEVPIGAVVVLDGEIIGRAHNLRETSQNAVTHAELLAIQDACKH 64

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
            +   L   +LYVTLEPC MC+ AI L+RI ++YYGA +PK G   +          +H+
Sbjct: 65  QNSWRLSGAELYVTLEPCPMCSGAILLSRIEKVYYGAKDPKAGTAGSLMNLLQDNRFNHT 124

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
            E+  G+ E  S ++++ FF+E R
Sbjct: 125 CEVEAGLMEVESSEMLKKFFQELR 148


>gi|91975752|ref|YP_568411.1| CMP/dCMP deaminase, zinc-binding [Rhodopseudomonas palustris BisB5]
 gi|91682208|gb|ABE38510.1| tRNA-adenosine deaminase [Rhodopseudomonas palustris BisB5]
          Length = 148

 Score =  219 bits (559), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 76/143 (53%), Positives = 99/143 (69%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  AL  A  A    E+P+G V V   ++I+ AGNR    +D TAHAE+LAIR   + L
Sbjct: 6   FMDLALAAANIAGRSGEVPIGCVIVRGGEVIATAGNRTLTDRDPTAHAELLAIREAAQKL 65

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
             E LP+ DLYVTLEPCTMCA AIS ARIRRLY+GA +PKGG +E+G +F+   TCHH+P
Sbjct: 66  GSERLPDCDLYVTLEPCTMCAGAISFARIRRLYFGAFDPKGGAVESGVRFFGQPTCHHAP 125

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+Y G+ E+ +  +++ FFK RR
Sbjct: 126 EVYSGVGEREAAAMLRAFFKARR 148


>gi|227545162|ref|ZP_03975211.1| tRNA-adenosine deaminase [Lactobacillus reuteri CF48-3A]
 gi|300909163|ref|ZP_07126624.1| tRNA-specific adenosine deaminase [Lactobacillus reuteri SD2112]
 gi|227184845|gb|EEI64916.1| tRNA-adenosine deaminase [Lactobacillus reuteri CF48-3A]
 gi|300893028|gb|EFK86387.1| tRNA-specific adenosine deaminase [Lactobacillus reuteri SD2112]
          Length = 170

 Score =  219 bits (558), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 55/145 (37%), Positives = 86/145 (59%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           + +   FM  A+ EA+ A + +E+P+GA+ V   ++I R  N   + +DVT HAE+LAI 
Sbjct: 8   LSEQQKFMKMAIAEAKQARILDEVPIGAIVVHEGQVIGRGHNMREKFQDVTYHAEMLAIM 67

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
             C  L    L + DLYVTLEPC MC+ AI  ARI+ +YYGA++PK G +++       +
Sbjct: 68  EACTNLGSWRLEDCDLYVTLEPCIMCSGAIINARIKNVYYGAADPKAGAVDSLYHLLNDS 127

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFF 145
             +H   ++ GI      Q++++FF
Sbjct: 128 RLNHQVNVHSGILGDECSQMLKNFF 152


>gi|332365640|gb|EGJ43399.1| tRNA-specific adenosine deaminase [Streptococcus sanguinis SK355]
          Length = 156

 Score =  219 bits (558), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 60/149 (40%), Positives = 84/149 (56%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +++   FM  AL+EA+ A   +EIP+G V V   KII R  N   EL+    HAEI+AI 
Sbjct: 6   IEEKEDFMREALKEAEIALAHDEIPIGCVLVKEGKIIGRGHNAREELQRAVMHAEIMAIE 65

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              R  +   L +  L+VT+EPC MC+ AI LARI  + YGA+N K G   +     T  
Sbjct: 66  EANRHENSWRLLDTTLFVTIEPCVMCSGAIGLARIPHVVYGAANQKFGAAGSLYDILTDE 125

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  E+  G+ ++   QI+QDFF+ RR
Sbjct: 126 RLNHRVEVETGVLQEECAQIMQDFFRNRR 154


>gi|260886684|ref|ZP_05897947.1| tRNA-specific adenosine deaminase [Selenomonas sputigena ATCC
           35185]
 gi|330839487|ref|YP_004414067.1| CMP/dCMP deaminase zinc-binding protein [Selenomonas sputigena ATCC
           35185]
 gi|260863536|gb|EEX78036.1| tRNA-specific adenosine deaminase [Selenomonas sputigena ATCC
           35185]
 gi|329747251|gb|AEC00608.1| CMP/dCMP deaminase zinc-binding protein [Selenomonas sputigena ATCC
           35185]
          Length = 168

 Score =  219 bits (558), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 58/150 (38%), Positives = 85/150 (56%), Gaps = 1/150 (0%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAI 59
           M     FM  AL+EAQ A    E+P+GAV V  +  +++RA N      D TAHAEI+A+
Sbjct: 1   MLDDIAFMKEALKEAQEAFQAGEVPIGAVLVDADGTVVARAHNMRETWHDGTAHAEIIAL 60

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
           +   R L +  L  + LYVT+EPC MCA A+ ++R+ R+ YGA++ K G  E+       
Sbjct: 61  QEAARKLGRWRLSGLTLYVTIEPCPMCAGALVMSRVDRVVYGATDAKAGACESLFNIVRH 120

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
              +H  E+  G+ E   R I++ FF +RR
Sbjct: 121 PALNHQLEMRAGVLEDECRAIMKRFFGQRR 150


>gi|300113226|ref|YP_003759801.1| CMP/dCMP deaminase zinc-binding protein [Nitrosococcus watsonii
           C-113]
 gi|299539163|gb|ADJ27480.1| CMP/dCMP deaminase zinc-binding protein [Nitrosococcus watsonii
           C-113]
          Length = 188

 Score =  219 bits (558), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 59/148 (39%), Positives = 78/148 (52%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           +K   +M  AL  A+ A    E+PVGAV V  ++I+    N     +D TAHAEI AIR 
Sbjct: 41  EKDIPWMYHALALARYAEETGEVPVGAVVVQEDEIVGEGWNCPINSRDPTAHAEIQAIRA 100

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
             + L    L    LYVTLEPC MCA AI  ARIRR+ +GA +PKGG + +         
Sbjct: 101 ASQQLGNYRLVGTTLYVTLEPCAMCAGAIIQARIRRVVFGAFDPKGGAVGSALSILPGER 160

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H  E   G+  +    I+  FF+ RR
Sbjct: 161 LNHQVECQGGVLAEACGAILSAFFRARR 188


>gi|306840968|ref|ZP_07473709.1| cytidine and deoxycytidylate deaminase family protein [Brucella sp.
           BO2]
 gi|306289025|gb|EFM60290.1| cytidine and deoxycytidylate deaminase family protein [Brucella sp.
           BO2]
          Length = 157

 Score =  219 bits (558), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 95/142 (66%), Positives = 111/142 (78%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  ALEEA  A  R E+P+GAV V N +II+RAGNR RE  DVTAHAEILAIR    +L 
Sbjct: 16  MDIALEEAHAAGERGEVPIGAVIVRNGEIIARAGNRTREFNDVTAHAEILAIRQAGEVLG 75

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
            E L + DLYVTLEPC MCAAAIS ARIRRLYYGAS+PKGGGIE+G +FYT  TCHH+PE
Sbjct: 76  SERLIDCDLYVTLEPCAMCAAAISFARIRRLYYGASDPKGGGIEHGGRFYTQPTCHHAPE 135

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
           IYPG  E  +R+I++DFF+E+R
Sbjct: 136 IYPGFCEADARKILKDFFREKR 157


>gi|304436805|ref|ZP_07396772.1| tRNA-specific adenosine deaminase [Selenomonas sp. oral taxon 149
           str. 67H29BP]
 gi|304370198|gb|EFM23856.1| tRNA-specific adenosine deaminase [Selenomonas sp. oral taxon 149
           str. 67H29BP]
          Length = 153

 Score =  219 bits (558), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 56/150 (37%), Positives = 85/150 (56%), Gaps = 1/150 (0%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAI 59
           M      M  ALEEA+ A    E+P+GAV + +   +IS   N      D TAHAE++AI
Sbjct: 1   MPDDLHGMRLALEEARRAYQCGEVPIGAVILDDVGSVISSGYNLRETEHDATAHAELIAI 60

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
           R  C+ L +  L  + LYVT+EPC MCA AI ++RI R+ YG+++ K G  E+       
Sbjct: 61  RRACKALGRWRLTGMTLYVTIEPCPMCAGAIVMSRISRVVYGSTDSKAGACESLFNITGC 120

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
              +H P++  G+  +    ++++FF+ERR
Sbjct: 121 PGLNHQPDVCAGVLAEECAALLKNFFRERR 150


>gi|296131565|ref|YP_003638812.1| CMP/dCMP deaminase zinc-binding protein [Thermincola sp. JR]
 gi|296030143|gb|ADG80911.1| CMP/dCMP deaminase zinc-binding protein [Thermincola potens JR]
          Length = 155

 Score =  219 bits (558), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 54/149 (36%), Positives = 89/149 (59%), Gaps = 1/149 (0%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           +K   +M  ALEEA+ A    E+P+GAV V+ + +++RA N   + KD TAHAE++AI+ 
Sbjct: 6   EKHIQYMQLALEEARAAFKLGEVPIGAVIVIGDDVVARAHNMKEQWKDATAHAELVAIKE 65

Query: 62  GCRILSQEI-LPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
             + L     L +  LYVT+EPC MCA A+  +RI ++ YGA++PK G + +        
Sbjct: 66  AVQKLGHWRYLKDAALYVTIEPCPMCAGAMVQSRIEKVVYGAADPKAGAMGSLMNLAQDP 125

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  E+  G+ E+   +++++FF+  R
Sbjct: 126 RLNHRVEVVAGVLEEECSELMKEFFRRLR 154


>gi|218708682|ref|YP_002416303.1| tRNA-specific adenosine deaminase [Vibrio splendidus LGP32]
 gi|218321701|emb|CAV17655.1| tRNA-specific adenosine deaminase [Vibrio splendidus LGP32]
          Length = 212

 Score =  219 bits (558), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 55/147 (37%), Positives = 82/147 (55%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
           +  +FM  A+E A+ A    E+PVGAV V + ++IS   NR+    D TAHAEI  +R  
Sbjct: 27  QDEIFMRRAIEVAKQAEKEGEVPVGAVLVKDGEVISEGWNRSIGCHDATAHAEIETLRKA 86

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
            + L    L +  LYVTLEPC MCA A+  +R++R+ +GA + K G        +     
Sbjct: 87  GQALENYRLLDTTLYVTLEPCPMCAGALLHSRVKRIVFGAPDLKAGAAGTVLNLFESQAS 146

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H  ++  G+ E+  R+ +Q FFK RR
Sbjct: 147 YHYADVEHGLLEEECREQLQAFFKRRR 173


>gi|50122182|ref|YP_051349.1| tRNA-specific adenosine deaminase [Pectobacterium atrosepticum
           SCRI1043]
 gi|49612708|emb|CAG76158.1| putative cytidine and deoxycytidylate deaminase [Pectobacterium
           atrosepticum SCRI1043]
          Length = 174

 Score =  219 bits (558), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 60/149 (40%), Positives = 77/149 (51%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           ++    +M  AL  AQ A    E+PVGAV VL+N+ I    NR     D TAHAEI+A+R
Sbjct: 10  LRDNEYWMRYALTLAQRAQDEGEVPVGAVLVLDNEAIGEGWNRPIGHHDPTAHAEIMALR 69

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
            G  +L    L E  LYVTLEPC MCA A+  +RI RL YGAS+ K G   +        
Sbjct: 70  QGGLVLQNYRLLETTLYVTLEPCIMCAGAMIHSRIGRLVYGASDEKTGAAGSLVDILRHP 129

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H   I  G+        +  FF+ RR
Sbjct: 130 GMNHQIVIESGVLADECSATLSAFFRMRR 158


>gi|86145643|ref|ZP_01063973.1| Cytosine/adenosine deaminase [Vibrio sp. MED222]
 gi|85836614|gb|EAQ54740.1| Cytosine/adenosine deaminase [Vibrio sp. MED222]
          Length = 212

 Score =  219 bits (558), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 55/147 (37%), Positives = 82/147 (55%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
           +  +FM  A+E A+ A    E+PVGAV V + ++IS   NR+    D TAHAEI  +R  
Sbjct: 27  QDEIFMRRAIEVAKQAEKEGEVPVGAVLVKDGEVISEGWNRSIGCHDATAHAEIETLRKA 86

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
            + L    L +  LYVTLEPC MCA A+  +R++R+ +GA + K G        +     
Sbjct: 87  GQALENYRLLDTTLYVTLEPCPMCAGALLHSRVKRIVFGAPDLKAGAAGTVLNLFESQAS 146

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H  ++  G+ E+  R+ +Q FFK RR
Sbjct: 147 YHYADVEHGLLEEECREQLQAFFKRRR 173


>gi|332360091|gb|EGJ37905.1| tRNA-specific adenosine deaminase [Streptococcus sanguinis SK1056]
          Length = 156

 Score =  218 bits (557), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 60/149 (40%), Positives = 85/149 (57%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +++   FM  AL+EA+ A   +EIP+G V V   KII R  N   EL+    HAEI+AI 
Sbjct: 6   IEEKEAFMREALKEAEIALAYDEIPIGCVLVKEGKIIGRGHNAREELQRAVMHAEIMAIE 65

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              R  +   L +  L+VT+EPC MC+ AI LARI  + YGA+N K G   +     T  
Sbjct: 66  EANRHENSWRLLDTTLFVTIEPCVMCSGAIGLARIPHVVYGAANQKFGAAGSLYDILTDE 125

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  E+  G+ ++   QI+QDFF++RR
Sbjct: 126 RLNHRVEVETGVLQEECAQIMQDFFRQRR 154


>gi|332358122|gb|EGJ35954.1| tRNA-specific adenosine deaminase [Streptococcus sanguinis SK49]
          Length = 156

 Score =  218 bits (557), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 60/149 (40%), Positives = 84/149 (56%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +++   FM  AL+EA+ A   +EIP+G V V   KII R  N   EL+    HAEI+AI 
Sbjct: 6   IEEKEAFMREALKEAEIALAHDEIPIGCVLVKEGKIIGRGHNAREELQRAVMHAEIMAIE 65

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              R  +   L +  L+VT+EPC MC+ AI LARI  + YGA+N K G   +     T  
Sbjct: 66  EANRHENSWRLLDTTLFVTIEPCVMCSGAIGLARIPHVVYGAANQKFGAAGSLYDILTDE 125

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  E+  G+ ++   QI+QDFF+ RR
Sbjct: 126 RLNHRVEVETGVLQEECAQIMQDFFRNRR 154


>gi|167629244|ref|YP_001679743.1| cytidine and deoxycytidylate deaminase zinc-binding region protein,
           putative [Heliobacterium modesticaldum Ice1]
 gi|167591984|gb|ABZ83732.1| cytidine and deoxycytidylate deaminase zinc-binding region protein,
           putative [Heliobacterium modesticaldum Ice1]
          Length = 152

 Score =  218 bits (557), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 53/146 (36%), Positives = 77/146 (52%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
            + FM  ALEE + A  + E+P+G V V + ++I R  N     K+  AHAE+LAI+   
Sbjct: 5   DDKFMGLALEEGRQAYAKGEVPIGCVIVKDGEVIGRGHNLRETEKNPVAHAEVLAIQDAA 64

Query: 64  RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123
             +    L    LYVT+EPC MCA AI LARI R+ +   +PKGG              +
Sbjct: 65  NRIGGWRLAGATLYVTVEPCPMCAGAIVLARIPRVVFAVMDPKGGAAGTCFNILESPWTN 124

Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149
           H   +  G+ E  +R+++Q FF+  R
Sbjct: 125 HRVSVISGVREGEARELMQSFFQRLR 150


>gi|322386624|ref|ZP_08060249.1| tRNA-specific adenosine deaminase [Streptococcus cristatus ATCC
           51100]
 gi|321269297|gb|EFX52232.1| tRNA-specific adenosine deaminase [Streptococcus cristatus ATCC
           51100]
          Length = 166

 Score =  218 bits (557), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 59/149 (39%), Positives = 86/149 (57%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +++  +FM  AL+EA+ A   +EIP+G V V N +II R  N   EL+    HAEI+AI 
Sbjct: 16  IEEKEMFMREALKEAEIALANDEIPIGCVLVKNGQIIGRGHNAREELQRAVMHAEIMAIE 75

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              +  +   L +  L+VT+EPC MC+ AI LARI ++ YGA N K G   +     T A
Sbjct: 76  EANQHENSWRLLDTTLFVTIEPCVMCSGAIGLARIPKVIYGAKNQKFGAGGSLYDILTDA 135

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  E+  G+ E+    I+Q+FF+ RR
Sbjct: 136 RLNHRVEVESGLLEEECAAIMQNFFRNRR 164


>gi|160876246|ref|YP_001555562.1| zinc-binding CMP/dCMP deaminase [Shewanella baltica OS195]
 gi|160861768|gb|ABX50302.1| CMP/dCMP deaminase zinc-binding [Shewanella baltica OS195]
 gi|315268435|gb|ADT95288.1| CMP/dCMP deaminase zinc-binding protein [Shewanella baltica OS678]
          Length = 175

 Score =  218 bits (557), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 50/146 (34%), Positives = 72/146 (49%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
              +M  A+  A+ A    E+PVGAV V + + I+   N +    D +AHAEIL +R   
Sbjct: 13  DEQWMQVAMLMAEKAEAEGEVPVGAVLVKDGQQIATGYNLSISQHDPSAHAEILCLREAG 72

Query: 64  RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123
           R++    L +  LYVTLEPC MCA A+  +RI R+ +GA + K G              +
Sbjct: 73  RLVENYRLLDATLYVTLEPCAMCAGAMVHSRIARVVFGARDEKTGAAGTVVNLLQHPAFN 132

Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149
           H  E+  G+        +  FFK RR
Sbjct: 133 HQVEVTSGVLADACSAQLSRFFKRRR 158


>gi|258620044|ref|ZP_05715084.1| zinc-binding domain protein [Vibrio mimicus VM573]
 gi|258587777|gb|EEW12486.1| zinc-binding domain protein [Vibrio mimicus VM573]
          Length = 178

 Score =  218 bits (557), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 55/147 (37%), Positives = 79/147 (53%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
           +   FM  A+  A  A  + E+PVGAV V + +II+   N +    D TAHAEI  IR  
Sbjct: 17  QDEQFMRRAIMLAAQAEEQGEVPVGAVLVRDGEIIAEGWNCSITHHDATAHAEIEVIRKA 76

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
            ++LS   L +  LYVTLEPC MCA A+  +R++R+ YGA + K G        +     
Sbjct: 77  GKVLSNYRLLDTTLYVTLEPCPMCAGALLHSRVKRIVYGAPDLKAGAAGTVMDLFNSQAS 136

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H   +  G+ E+  R  +Q FF+ RR
Sbjct: 137 YHYATVEKGLLEEECRAQLQAFFQRRR 163


>gi|284006748|emb|CBA72005.1| tRNA-specific adenosine deaminase [Arsenophonus nasoniae]
          Length = 164

 Score =  218 bits (557), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 58/148 (39%), Positives = 78/148 (52%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           KK   +M  A+  A+ A  + EIPVGAV V  +K+I+   N+     D  AHAEI+A+R 
Sbjct: 5   KKDVYWMRKAILLAEKAQAKGEIPVGAVLVHEDKLIAEGWNQPISDHDPCAHAEIIALRA 64

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
           G + L    L    LYVTLEPC MCA A+  ARI RL YGA + K G   +    +    
Sbjct: 65  GGQYLQNYRLLNTTLYVTLEPCIMCAGAMIHARISRLVYGACDQKTGAAGSIIDVFNHPD 124

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H   +  GI       ++  FFK+RR
Sbjct: 125 MNHRILVLGGILSDECSAMLSRFFKQRR 152


>gi|299134221|ref|ZP_07027414.1| CMP/dCMP deaminase zinc-binding [Afipia sp. 1NLS2]
 gi|298590968|gb|EFI51170.1| CMP/dCMP deaminase zinc-binding [Afipia sp. 1NLS2]
          Length = 148

 Score =  218 bits (557), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 76/143 (53%), Positives = 105/143 (73%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  AL++A+ AA   E+P+G V V +  +I++AGNR    +D TAHAE++A+R   R L
Sbjct: 6   FMDLALKQAEIAASGGEVPIGCVVVHDGAVIAQAGNRTLADRDPTAHAEMVALREAARKL 65

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
            +E L + DLYVTLEPCTMCA AIS ARIRRLYYGA +PKGG I++G +F+   TCHH P
Sbjct: 66  GRERLTDCDLYVTLEPCTMCAGAISHARIRRLYYGALDPKGGAIDSGVRFFGSPTCHHVP 125

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           ++YP + E+++  +++DFFK RR
Sbjct: 126 DVYPAVGEEQAAALLRDFFKARR 148


>gi|300311527|ref|YP_003775619.1| cytosine/adenosine deaminases protein [Herbaspirillum seropedicae
           SmR1]
 gi|300074312|gb|ADJ63711.1| cytosine/adenosine deaminases protein [Herbaspirillum seropedicae
           SmR1]
          Length = 185

 Score =  218 bits (557), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 55/148 (37%), Positives = 84/148 (56%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           +   + M  ALE+A++A    E+PVGAV V +  +I+   N+     D TAHAEI+A+R 
Sbjct: 16  EADLLHMRAALEQARHAWALGEVPVGAVVVKDGVVIATGFNQPIGKHDPTAHAEIMALRR 75

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
              IL    LP  +LYVTLEPC MC+ A+  AR+ R+ +GA++PK G   +    +    
Sbjct: 76  AAEILGNYRLPGCELYVTLEPCVMCSGAMMHARLARVVFGAADPKTGACGSVLNLFEQDQ 135

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H   +  G+  +   Q+++DFF  RR
Sbjct: 136 LNHHTALLGGVMAEECGQLLKDFFAMRR 163


>gi|325688867|gb|EGD30875.1| tRNA-specific adenosine deaminase [Streptococcus sanguinis SK115]
          Length = 156

 Score =  218 bits (557), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 61/149 (40%), Positives = 86/149 (57%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +++  VFM  AL+EA+ A   +EIP+G V V   KII R  N   EL+    HAEI+AI 
Sbjct: 6   IEEKEVFMREALKEAEIALAHDEIPIGCVLVKEGKIIGRGHNAREELQRAVMHAEIMAIE 65

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              R  +   L +  L+VT+EPC MC+ AI LARI  + YGA+N K G   +     T  
Sbjct: 66  EANRHENSWRLLDTTLFVTIEPCVMCSGAIGLARIPHVVYGAANQKFGAAGSLYDILTDE 125

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  E+  G+ ++   QI+QDFF++RR
Sbjct: 126 RLNHRVEVEVGVLQEECVQIMQDFFRQRR 154


>gi|90410888|ref|ZP_01218902.1| Putative cytosine/adenosine deaminase [Photobacterium profundum
           3TCK]
 gi|90328101|gb|EAS44412.1| Putative cytosine/adenosine deaminase [Photobacterium profundum
           3TCK]
          Length = 175

 Score =  218 bits (557), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 51/146 (34%), Positives = 80/146 (54%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
             ++M  A+E A  A    E+PVGAV V   +++    NR+    D TAHAE++A+R   
Sbjct: 14  DELYMRRAIELASQAEAEGEVPVGAVVVYEGRVVGEGWNRSIGQHDATAHAEMMALRQAG 73

Query: 64  RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123
           +++    L +  LYVTLEPC MCA A+  +RI ++ +GAS+ K G   +     +    +
Sbjct: 74  KVIQNYRLLDATLYVTLEPCPMCAGAMVHSRIGKVIFGASDLKTGAAGSVMNLLSYDEVN 133

Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149
           H  +   G+ ++  R  +Q FFK RR
Sbjct: 134 HHVDCQAGVLDEECRAQLQAFFKRRR 159


>gi|302390826|ref|YP_003826646.1| tRNA-adenosine deaminase [Acetohalobium arabaticum DSM 5501]
 gi|302202903|gb|ADL11581.1| tRNA-adenosine deaminase [Acetohalobium arabaticum DSM 5501]
          Length = 155

 Score =  218 bits (556), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 55/148 (37%), Positives = 81/148 (54%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
                +M  AL EAQ A  + E+P+GAV V  +++I+R+ N   +L D TAHAEILAI+ 
Sbjct: 3   SDDEFYMKLALAEAQKAYDKAEVPIGAVVVKGDEVIARSHNLREKLADPTAHAEILAIKE 62

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
               L    L    +YVT+EPC MCA A+  AR+ RL YG ++ K G   +       + 
Sbjct: 63  AANTLGDWRLYNCTIYVTVEPCVMCAGALVQARVERLVYGTADLKAGAAGSILDLVQFSD 122

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H  E+   I E   + I++ FF++ R
Sbjct: 123 FNHQLEVKSAILEDECKDIMESFFQDLR 150


>gi|45442315|ref|NP_993854.1| tRNA-specific adenosine deaminase [Yersinia pestis biovar Microtus
           str. 91001]
 gi|108808356|ref|YP_652272.1| tRNA-specific adenosine deaminase [Yersinia pestis Antiqua]
 gi|108811379|ref|YP_647146.1| tRNA-specific adenosine deaminase [Yersinia pestis Nepal516]
 gi|145599538|ref|YP_001163614.1| tRNA-specific adenosine deaminase [Yersinia pestis Pestoides F]
 gi|149365378|ref|ZP_01887413.1| tRNA-specific adenosine deaminase [Yersinia pestis CA88-4125]
 gi|229838506|ref|ZP_04458665.1| tRNA-specific adenosine-34 deaminase [Yersinia pestis biovar
           Orientalis str. PEXU2]
 gi|229895510|ref|ZP_04510681.1| tRNA-specific adenosine-34 deaminase [Yersinia pestis Pestoides A]
 gi|229899076|ref|ZP_04514220.1| tRNA-specific adenosine-34 deaminase [Yersinia pestis biovar
           Orientalis str. India 195]
 gi|229901629|ref|ZP_04516751.1| tRNA-specific adenosine-34 deaminase [Yersinia pestis Nepal516]
 gi|45437179|gb|AAS62731.1| putative zinc-binding protein [Yersinia pestis biovar Microtus str.
           91001]
 gi|108775027|gb|ABG17546.1| tRNA-adenosine deaminase [Yersinia pestis Nepal516]
 gi|108780269|gb|ABG14327.1| tRNA-adenosine deaminase [Yersinia pestis Antiqua]
 gi|145211234|gb|ABP40641.1| tRNA-adenosine deaminase [Yersinia pestis Pestoides F]
 gi|149291791|gb|EDM41865.1| tRNA-specific adenosine deaminase [Yersinia pestis CA88-4125]
 gi|229681558|gb|EEO77652.1| tRNA-specific adenosine-34 deaminase [Yersinia pestis Nepal516]
 gi|229688021|gb|EEO80093.1| tRNA-specific adenosine-34 deaminase [Yersinia pestis biovar
           Orientalis str. India 195]
 gi|229694872|gb|EEO84919.1| tRNA-specific adenosine-34 deaminase [Yersinia pestis biovar
           Orientalis str. PEXU2]
 gi|229701316|gb|EEO89344.1| tRNA-specific adenosine-34 deaminase [Yersinia pestis Pestoides A]
 gi|320016065|gb|ADV99636.1| tRNA-specific adenosine-34 deaminase [Yersinia pestis biovar
           Medievalis str. Harbin 35]
          Length = 187

 Score =  218 bits (556), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 59/147 (40%), Positives = 77/147 (52%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
               +M  AL  A  A    E+PVGAV VL NK+I    NR     D TAHAEI+A+R G
Sbjct: 24  SDEYWMRHALTLALRAQEEGEVPVGAVLVLGNKVIGEGWNRPIRDNDPTAHAEIMALRQG 83

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
            + +    L +  LYVTLEPC MCA A+  +RIRRL YGA++ K G   +          
Sbjct: 84  GQAVQNYRLLDATLYVTLEPCVMCAGAMVHSRIRRLVYGANDVKTGAAGSLVDILRHPGM 143

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H  E+  GI        +  FF++RR
Sbjct: 144 NHQIEVSAGILAIACSHQLSAFFRQRR 170


>gi|152978402|ref|YP_001344031.1| CMP/dCMP deaminase zinc-binding [Actinobacillus succinogenes 130Z]
 gi|150840125|gb|ABR74096.1| CMP/dCMP deaminase zinc-binding [Actinobacillus succinogenes 130Z]
          Length = 182

 Score =  218 bits (556), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 62/147 (42%), Positives = 84/147 (57%), Gaps = 1/147 (0%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMG 62
              FM+ AL  A  A +  EIPVGAV V   N+II    N +    D TAHAEI+A+R G
Sbjct: 13  DEFFMNHALALADKARMLGEIPVGAVLVDEHNQIIGEGWNLSIIHSDPTAHAEIVALRRG 72

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
            + +    L    LYVTLEPCTMCA AI  +RI+RL +GA++ K G + +   F+     
Sbjct: 73  AQKIQNYRLLNCTLYVTLEPCTMCAGAILHSRIKRLVFGAADEKTGAVGSRFHFFEDYKM 132

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H  E+  G+  ++  Q + DFFK RR
Sbjct: 133 NHVIEVTGGVLAEKCGQKLSDFFKMRR 159


>gi|213612302|ref|ZP_03370128.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-2068]
          Length = 163

 Score =  218 bits (556), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 56/144 (38%), Positives = 77/144 (53%)

Query: 6   VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
            +M  AL  A+ A    E+PVGAV V N+++I    NR     D TAHAEI+A+R G  +
Sbjct: 1   YWMRHALTLAKRAWDEREVPVGAVLVHNHRVIGEGWNRPIGRHDPTAHAEIMALRQGGLV 60

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           L    L +  LYVTLEPC MCA A+  +RI R+ +GA + K G   +          +H 
Sbjct: 61  LQNYRLLDTTLYVTLEPCVMCAGAMVHSRIGRVVFGARDAKTGAAGSLIDVLHHPGMNHR 120

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
            EI  G+       ++ DFF+ RR
Sbjct: 121 VEIIEGVLRDECATLLSDFFRMRR 144


>gi|297543592|ref|YP_003675894.1| CMP/dCMP deaminase zinc-binding protein [Thermoanaerobacter
           mathranii subsp. mathranii str. A3]
 gi|296841367|gb|ADH59883.1| CMP/dCMP deaminase zinc-binding protein [Thermoanaerobacter
           mathranii subsp. mathranii str. A3]
          Length = 148

 Score =  218 bits (556), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 58/145 (40%), Positives = 79/145 (54%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           N FM  A+ EA  +    E+PVGAV V +++II R  N+     D TAHAEI+AI+  C+
Sbjct: 3   NKFMKAAILEANKSYQLREVPVGAVIVKDDQIIGRGFNQKEATNDATAHAEIMAIKEACK 62

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
            L    L +  +YVTLEPC MCA AI  ARI+R+Y G  + K G                
Sbjct: 63  TLGSWRLDDCSMYVTLEPCPMCAGAILEARIKRVYIGTESDKSGAAGTVINLLNNPDLGS 122

Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149
             E+Y GI E   + ++++FFK  R
Sbjct: 123 KTEVYFGIMEDECKMLLENFFKTLR 147


>gi|119476440|ref|ZP_01616791.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [marine
           gamma proteobacterium HTCC2143]
 gi|119450304|gb|EAW31539.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [marine
           gamma proteobacterium HTCC2143]
          Length = 159

 Score =  218 bits (556), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 62/148 (41%), Positives = 86/148 (58%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
              + +M  A++ AQ A    E+PVGAV VLN+K+I    N+   L D TAHAE++AI+ 
Sbjct: 4   DTDHHYMEAAIKLAQKAGALGEVPVGAVVVLNDKVIGEGFNQPISLSDPTAHAEMVAIKD 63

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
             + L    LPE  LYVT+EPCTMCA A+  AR++R+ YGA+  K G  E+    +    
Sbjct: 64  AAKALQNYRLPEATLYVTIEPCTMCAGAMVHARVKRVVYGATESKSGVAESNGCLFDNTY 123

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H  E+  GI  +R   +I DFF  RR
Sbjct: 124 LNHKVEVVGGIMAERCSNLISDFFAARR 151


>gi|92118638|ref|YP_578367.1| CMP/dCMP deaminase, zinc-binding [Nitrobacter hamburgensis X14]
 gi|91801532|gb|ABE63907.1| tRNA-adenosine deaminase [Nitrobacter hamburgensis X14]
          Length = 148

 Score =  218 bits (556), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 75/143 (52%), Positives = 99/143 (69%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  ALE A +A    E+P+G V V + ++I+ AGNR    +D TAHAE+LA+R     +
Sbjct: 6   FMDLALEAANSAGKSGEVPIGCVIVRDGEVIAAAGNRTLTDRDPTAHAEVLALRAAAHAI 65

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
             E L + DLYVTLEPCTMCA AIS ARIRRLYYGA +PKGG +++G +F+   TCHH P
Sbjct: 66  GSERLTDCDLYVTLEPCTMCAGAISFARIRRLYYGAPDPKGGAVDSGVRFFAAPTCHHRP 125

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+YP + E  +  +++DFFK RR
Sbjct: 126 EVYPAVGESEAATLLRDFFKARR 148


>gi|327463521|gb|EGF09840.1| tRNA-specific adenosine deaminase [Streptococcus sanguinis SK1057]
 gi|327467872|gb|EGF13362.1| tRNA-specific adenosine deaminase [Streptococcus sanguinis SK330]
          Length = 156

 Score =  218 bits (556), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 59/149 (39%), Positives = 85/149 (57%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +++   FM  AL+EA+ A   +EIP+G V V   KII R  N   EL+    HAEI+AI 
Sbjct: 6   IEEKEAFMREALKEAEIALAHDEIPIGCVLVKEGKIIGRGHNAREELQRAVMHAEIMAIE 65

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              R  +   L +  L+VT+EPC MC+ AI LARI  + YGA+N K G   +     T  
Sbjct: 66  EANRHENSWRLLDTTLFVTIEPCVMCSGAIGLARIPHVVYGAANQKFGAAGSLYDILTDE 125

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  E+  G+ ++   QI+Q+FF++RR
Sbjct: 126 RLNHRVEVETGVLQEECAQIMQEFFRQRR 154


>gi|324989861|gb|EGC21804.1| tRNA-specific adenosine deaminase [Streptococcus sanguinis SK353]
 gi|325686683|gb|EGD28709.1| tRNA-specific adenosine deaminase [Streptococcus sanguinis SK72]
          Length = 156

 Score =  218 bits (556), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 61/149 (40%), Positives = 85/149 (57%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +++  VFM  AL+EA+ A   +EIP+G V V   KII R  N   EL+    HAEI+AI 
Sbjct: 6   IEEKEVFMREALKEAEIALAHDEIPIGCVLVKEGKIIGRGHNAREELQRAVMHAEIMAIE 65

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              R  +   L +  L+VT+EPC MC+ AI LARI  + YGA+N K G   +     T  
Sbjct: 66  EANRHENSWRLLDTTLFVTIEPCVMCSGAIGLARIPHVVYGAANQKFGAAGSLYDILTDE 125

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  E+  G+ ++   QI+QDFF+ RR
Sbjct: 126 RLNHRVEVEVGVLQEECAQIMQDFFRNRR 154


>gi|333000872|gb|EGK20443.1| tRNA-specific adenosine deaminase [Shigella flexneri K-218]
          Length = 156

 Score =  218 bits (556), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 57/142 (40%), Positives = 77/142 (54%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  AL  A+ A    E+PVGAV V NN++I    NR     D TAHAEI+A+R G  ++ 
Sbjct: 1   MRHALTLAKRAWDEREVPVGAVLVHNNRVIGEGWNRPIGRHDPTAHAEIMALRQGGLVMQ 60

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
              L +  LYVTLEPC MCA A+  +RI R+ +GA + K G + +          +H  E
Sbjct: 61  NYRLIDATLYVTLEPCVMCAGAMIHSRIGRVVFGARDAKTGAVGSLMDVLHHPGMNHRVE 120

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
           I  GI       ++ DFF+ RR
Sbjct: 121 ITEGILADECAALLSDFFRMRR 142


>gi|225860063|ref|YP_002741572.1| tRNA-specific adenosine deaminase [Streptococcus pneumoniae
           Taiwan19F-14]
 gi|298229197|ref|ZP_06962878.1| tRNA-specific adenosine deaminase [Streptococcus pneumoniae str.
           Canada MDR_19F]
 gi|298254029|ref|ZP_06977615.1| tRNA-specific adenosine deaminase [Streptococcus pneumoniae str.
           Canada MDR_19A]
 gi|298501811|ref|YP_003723751.1| cytosine deaminase [Streptococcus pneumoniae TCH8431/19A]
 gi|225728250|gb|ACO24101.1| tRNA-specific adenosine deaminase [Streptococcus pneumoniae
           Taiwan19F-14]
 gi|298237406|gb|ADI68537.1| possible cytosine deaminase [Streptococcus pneumoniae TCH8431/19A]
 gi|327390436|gb|EGE88776.1| cytidine and deoxycytidylate deaminase zinc-binding region family
           protein [Streptococcus pneumoniae GA04375]
          Length = 155

 Score =  218 bits (556), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 60/149 (40%), Positives = 80/149 (53%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +++  VFM  AL EA+ A   +EIP+G V V + +II R  N   EL+    HAEI+AI 
Sbjct: 5   LEEKEVFMREALREAEIALEHDEIPIGCVIVKDGEIIGRGHNAREELQRAVMHAEIMAIE 64

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
                     L +  L+VT+EPC MC+ AI LARI  + YGA N K G   +     T  
Sbjct: 65  DANLSKESWRLLDCTLFVTIEPCVMCSGAIGLARIPNVVYGAKNQKFGAAGSLYDILTDE 124

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  E+  GI E     I+QDFF+ RR
Sbjct: 125 RLNHRVEVEIGILEDECAAIMQDFFRNRR 153


>gi|227510688|ref|ZP_03940737.1| possible guanine deaminase [Lactobacillus brevis subsp. gravesensis
           ATCC 27305]
 gi|227189809|gb|EEI69876.1| possible guanine deaminase [Lactobacillus brevis subsp. gravesensis
           ATCC 27305]
          Length = 157

 Score =  218 bits (556), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 57/144 (39%), Positives = 82/144 (56%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
            K   FM  AL EAQ A L  E+P+GAV   + +II R  N    L D  AHAEI+AI  
Sbjct: 4   NKDEKFMKMALIEAQKAYLIGEVPIGAVITQDGQIIGRGHNLREHLNDGVAHAEIMAIEE 63

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
            CR L    L + +LYVT+EPC MC+ AI  +RI R+ +GA + K G + +  +    + 
Sbjct: 64  ACRYLRSWRLVDCELYVTIEPCLMCSGAIVNSRIDRVVFGARDKKAGAVRSLYKVLEDSR 123

Query: 122 CHHSPEIYPGISEQRSRQIIQDFF 145
            +H+ E+  G+ +    +I++DFF
Sbjct: 124 LNHNVEVLEGVLQPACSKIMKDFF 147


>gi|149006819|ref|ZP_01830505.1| deoxyuridine 5'-triphosphate nucleotidohydrolase [Streptococcus
           pneumoniae SP18-BS74]
 gi|307126250|ref|YP_003878281.1| tRNA-specific adenosine deaminase [Streptococcus pneumoniae 670-6B]
 gi|147761734|gb|EDK68698.1| deoxyuridine 5'-triphosphate nucleotidohydrolase [Streptococcus
           pneumoniae SP18-BS74]
 gi|306483312|gb|ADM90181.1| tRNA-specific adenosine deaminase [Streptococcus pneumoniae 670-6B]
 gi|332076481|gb|EGI86943.1| cytidine and deoxycytidylate deaminase zinc-binding region family
           protein [Streptococcus pneumoniae GA17545]
          Length = 155

 Score =  218 bits (556), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 61/149 (40%), Positives = 81/149 (54%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +++  VFM  AL EA+ A   +EIP+G V V + +II R  N   EL+    HAEI+AI 
Sbjct: 5   LEEKEVFMREALREAEIALEHDEIPIGCVIVKDGEIIGRGHNAREELQRAVMHAEIMAIE 64

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
                     L +  L+VT+EPC MC+ AI LARI  + YGA N K GG  +     T  
Sbjct: 65  DANLSEESWRLLDCTLFVTIEPCVMCSGAIGLARIPNVVYGAKNQKFGGAGSLYNILTDE 124

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  E+  GI E     I+QDFF+ RR
Sbjct: 125 RLNHRVEVEIGILEDECAAIMQDFFRNRR 153


>gi|171911154|ref|ZP_02926624.1| cytidine/deoxycytidylate deaminase family protein [Verrucomicrobium
           spinosum DSM 4136]
          Length = 176

 Score =  218 bits (556), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 57/146 (39%), Positives = 83/146 (56%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
              +M  AL +A+ AA ++E+P+GAV V  ++II+RA N+   LKD TAHAE++A+    
Sbjct: 13  DEHYMREALRQARKAARQDEVPIGAVIVHGSQIIARAWNQVETLKDATAHAEMIALTQAQ 72

Query: 64  RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123
             L    L E DLYVT EPC MCA AI   R+RR+ +G  + KGG              +
Sbjct: 73  GALGDWRLNECDLYVTKEPCPMCAGAIMHCRVRRVIFGCPDLKGGAAGGYWNLLQSPNLN 132

Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149
           H  EI  G+  +   ++++ FF+E R
Sbjct: 133 HRSEITAGVLGEECVEVLKSFFREAR 158


>gi|160894462|ref|ZP_02075238.1| hypothetical protein CLOL250_02014 [Clostridium sp. L2-50]
 gi|156863773|gb|EDO57204.1| hypothetical protein CLOL250_02014 [Clostridium sp. L2-50]
          Length = 214

 Score =  217 bits (555), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 52/148 (35%), Positives = 82/148 (55%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           K   ++M  A++ AQ A ++ ++P+G V V +NK+I+R  N+    K   AHAE+LAI  
Sbjct: 57  KMYEIYMKKAIKLAQKAYVQGDVPIGCVIVKDNKVIARGYNKRNLKKTTLAHAELLAIEQ 116

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
             + L    L +  +YVTLEPC MCA AI  ARI ++  G  N K G   +    + ++ 
Sbjct: 117 ASKKLGDWRLEDCTMYVTLEPCQMCAGAIVQARIPKVVIGCMNKKAGCAGSILNMFDMSA 176

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H  E   GI ++    +++DFF + R
Sbjct: 177 FNHQVETVYGICQEECSSLMKDFFADLR 204


>gi|309800211|ref|ZP_07694392.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus
           infantis SK1302]
 gi|308116152|gb|EFO53647.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus
           infantis SK1302]
          Length = 166

 Score =  217 bits (555), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 59/148 (39%), Positives = 81/148 (54%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           ++  VFM  AL+EA+ A   +EIP+G V V + +II R  N   EL+    HAEI+AI  
Sbjct: 6   EEKEVFMREALKEAEIALEHDEIPIGCVIVKDGEIIGRGHNAREELQRAVMHAEIMAIEN 65

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
                    L +  L+VT+EPC MC+ AI LARI ++ YGA N K G   +     T   
Sbjct: 66  ANVREESWRLLDCTLFVTIEPCVMCSGAIGLARIPKVVYGAKNQKFGAAGSLYDILTDER 125

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H  E+  GI E     I+Q+FF+ RR
Sbjct: 126 LNHRVEVETGILESECAGIMQEFFRNRR 153


>gi|291520377|emb|CBK75598.1| Cytosine/adenosine deaminases [Butyrivibrio fibrisolvens 16/4]
          Length = 179

 Score =  217 bits (555), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 59/149 (39%), Positives = 85/149 (57%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +K    +M+ AL+EA+ A   NE+P+G V V N+KII+R  NR    K V AHAEI AI+
Sbjct: 24  LKTYEKYMAQALKEARKAYDINEVPIGCVIVQNDKIIARGYNRRNTDKSVLAHAEIAAIQ 83

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
             C+      L +  LYVTLEPC MCA AI  ARI R+  GA NPK G   +      + 
Sbjct: 84  KACKKTGDWRLEDCTLYVTLEPCQMCAGAIVQARIPRVVVGAMNPKAGCAGSILNILQMH 143

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  ++   +  +  +++++ FF+E R
Sbjct: 144 QFNHVCDLETDVLGEECKEMMKSFFEELR 172


>gi|84388906|ref|ZP_00991114.1| Cytosine/adenosine deaminase [Vibrio splendidus 12B01]
 gi|84376970|gb|EAP93842.1| Cytosine/adenosine deaminase [Vibrio splendidus 12B01]
          Length = 194

 Score =  217 bits (555), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 57/147 (38%), Positives = 80/147 (54%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
           +  +FM  A+E A+ A    E+PVGAV V   +IIS   NR+    D TAHAEI  +R  
Sbjct: 9   QDEIFMRRAIEVAKQAEKEGEVPVGAVLVKEGEIISEGWNRSIGSHDATAHAEIETLRKA 68

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
            + L    L +  LYVTLEPC MCA A+  +R++R+ +GA + K G        +     
Sbjct: 69  GQALENYRLLDTTLYVTLEPCPMCAGALLHSRVKRIVFGAPDLKAGAAGTVLNLFESQAS 128

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H  ++  G+ EQ  R  +Q FFK RR
Sbjct: 129 YHYADVENGLLEQECRDQLQAFFKRRR 155


>gi|163814785|ref|ZP_02206174.1| hypothetical protein COPEUT_00936 [Coprococcus eutactus ATCC 27759]
 gi|158450420|gb|EDP27415.1| hypothetical protein COPEUT_00936 [Coprococcus eutactus ATCC 27759]
          Length = 181

 Score =  217 bits (555), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 54/146 (36%), Positives = 77/146 (52%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
              +M  AL +A+ A    ++P+G V V   KII+R  N+    K   AHAEILAI    
Sbjct: 29  HEKYMDKALAQARRAYANGDVPIGCVIVHEGKIIARGFNKRNLKKTTLAHAEILAIEQAS 88

Query: 64  RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123
           + L    L E  +YVTLEPC MCA AI  ARI ++  G  NPK G   +      +   +
Sbjct: 89  KKLGDWRLEECTMYVTLEPCQMCAGAIVQARIPKVVIGCMNPKAGCAGSIINLLQMQQFN 148

Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149
           H  ++  G+ EQ    ++++FFK+ R
Sbjct: 149 HQVDVIRGVREQECSGMMKEFFKDLR 174


>gi|324992584|gb|EGC24505.1| tRNA-specific adenosine deaminase [Streptococcus sanguinis SK405]
          Length = 156

 Score =  217 bits (555), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 59/149 (39%), Positives = 84/149 (56%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +++   FM  AL+EA+ A   +EIP+G V V   KII R  N   EL+    HAEI+AI 
Sbjct: 6   IEEKEAFMREALKEAEIALAHDEIPIGCVLVKEGKIIGRGHNAREELQRAVMHAEIMAIE 65

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              R  +   L    L+VT+EPC MC+ AI LARI  + YGA+N K G   +     T  
Sbjct: 66  EANRHENSWRLLGTTLFVTIEPCVMCSGAIGLARIPHVVYGAANQKFGAAGSLYDILTDE 125

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  E+  G+ ++   QI+Q+FF++RR
Sbjct: 126 RLNHRVEVETGVLQEECAQIMQEFFRQRR 154


>gi|229542244|ref|ZP_04431304.1| CMP/dCMP deaminase zinc-binding [Bacillus coagulans 36D1]
 gi|229326664|gb|EEN92339.1| CMP/dCMP deaminase zinc-binding [Bacillus coagulans 36D1]
          Length = 169

 Score =  217 bits (555), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 52/148 (35%), Positives = 80/148 (54%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
            +   +M  A++EA  A    E+P+GAV VL+ K+I+ A N     +   AHAE+LAI  
Sbjct: 3   NRDEYYMRLAIQEAVKAQRLREVPIGAVIVLDEKVIAAAHNLRETTQRAAAHAELLAIEK 62

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
            C +     L   +LYVTLEPC MC+ A+  +RI+R+ YGA +PK G   +         
Sbjct: 63  ACEVTGSWRLENAELYVTLEPCPMCSGAVLQSRIKRVVYGAKDPKAGCAGSLMNLLEDGR 122

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H  E+  G+ E    ++++ FF+  R
Sbjct: 123 FNHRSEVVSGVLETECGELLRSFFRSLR 150


>gi|270291666|ref|ZP_06197882.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus
           sp. M143]
 gi|270279751|gb|EFA25592.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus
           sp. M143]
          Length = 155

 Score =  217 bits (555), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 59/148 (39%), Positives = 78/148 (52%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           ++   FM  AL EA+ A   +EIP+G V V N +II R  N   EL+    HAEI+AI  
Sbjct: 6   EEKEAFMREALREAEIALEHDEIPIGCVIVKNGEIIGRGHNAREELQRAVMHAEIMAIEN 65

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
                    L +  L+VT+EPC MC+ AI LARI  + YGA N K G   +     T   
Sbjct: 66  ANASEESWRLLDCTLFVTIEPCVMCSGAIGLARIPNVVYGAKNQKFGAAGSLYDILTDER 125

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H  E+  G+ E     I+QDFF+ RR
Sbjct: 126 LNHRVEVETGVLESECAAIMQDFFRNRR 153


>gi|254719939|ref|ZP_05181750.1| cytidine and deoxycytidylate deaminase family protein [Brucella sp.
           83/13]
 gi|265984947|ref|ZP_06097682.1| CMP/dCMP deaminase zinc-binding protein [Brucella sp. 83/13]
 gi|306838528|ref|ZP_07471366.1| cytidine and deoxycytidylate deaminase family protein [Brucella sp.
           NF 2653]
 gi|264663539|gb|EEZ33800.1| CMP/dCMP deaminase zinc-binding protein [Brucella sp. 83/13]
 gi|306406395|gb|EFM62636.1| cytidine and deoxycytidylate deaminase family protein [Brucella sp.
           NF 2653]
          Length = 157

 Score =  217 bits (555), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 93/142 (65%), Positives = 110/142 (77%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  ALEEA  A  R E+P+GAV V + +II+RAGNR RE  DVTAHAEIL IR    +L 
Sbjct: 16  MDIALEEAHAAGERGEVPIGAVIVRDGEIIARAGNRTREFNDVTAHAEILTIRQAGEVLG 75

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
            E L + DLYVTLEPC MCAAAIS ARIRRLYYGAS+PKGGGIE+G +FYT  TCHH+PE
Sbjct: 76  SERLVDCDLYVTLEPCAMCAAAISFARIRRLYYGASDPKGGGIEHGGRFYTQPTCHHAPE 135

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
           IYPG  E  +R+I++DFF+E+R
Sbjct: 136 IYPGFCEADARKILKDFFREKR 157


>gi|73541535|ref|YP_296055.1| tRNA-adenosine deaminase [Ralstonia eutropha JMP134]
 gi|72118948|gb|AAZ61211.1| tRNA-adenosine deaminase [Ralstonia eutropha JMP134]
          Length = 177

 Score =  217 bits (555), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 57/149 (38%), Positives = 87/149 (58%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           + +   ++  A++EA+ A    E+PVGAV V N+ II+R  N   +  D +AHAE+ A+R
Sbjct: 10  IARDERYLRAAMDEARLAEAAGEVPVGAVVVWNDAIIARGHNLPIKSMDPSAHAEMQALR 69

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              ++L    +PE +LYVTLEPC MC+ AI  AR+R + +GAS+PK G   +    +  A
Sbjct: 70  AAAQVLGNYRMPECELYVTLEPCAMCSGAILHARLRHVVFGASDPKTGAAGSVVNLFEQA 129

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H   I  G+      Q+++DFF  RR
Sbjct: 130 QLNHQTTITGGVLADECGQMLKDFFGARR 158


>gi|222152093|ref|YP_002561253.1| hypothetical protein MCCL_1850 [Macrococcus caseolyticus JCSC5402]
 gi|222121222|dbj|BAH18557.1| conserved hypothetical protein [Macrococcus caseolyticus JCSC5402]
          Length = 161

 Score =  217 bits (555), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 50/147 (34%), Positives = 79/147 (53%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
              +FM  A++EA+ A   NE+P+GAV + + ++I R  N     ++   HAE++AI   
Sbjct: 2   NHEIFMQMAIDEAKKAYKINEVPIGAVVIKHGEVIGRGHNLRESSQNPLMHAEVVAINEA 61

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
            + +    L E  LYVTLEPC MC+ AI ++RI  + YGA + KGG   +       +  
Sbjct: 62  SKNIGSWRLEECVLYVTLEPCVMCSGAIVMSRIPTVVYGAHDAKGGCSGSLMNLLHESRF 121

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H   +  GI  +    +++DFFK  R
Sbjct: 122 NHQATVIAGIKHEECSMLLKDFFKSLR 148


>gi|315122181|ref|YP_004062670.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [Candidatus
           Liberibacter solanacearum CLso-ZC1]
 gi|313495583|gb|ADR52182.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [Candidatus
           Liberibacter solanacearum CLso-ZC1]
          Length = 150

 Score =  217 bits (555), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 125/149 (83%), Positives = 132/149 (88%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M   N FMS ALEEA NA+LRNEIPVGAVAVLNNKII RAGNRNRELKDVTAHAEILAIR
Sbjct: 1   MILKNNFMSLALEEALNASLRNEIPVGAVAVLNNKIIGRAGNRNRELKDVTAHAEILAIR 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
           M C+ LSQE LP VDLYVTLEPCTMCAAAIS ARIRRLYYGASNPKGG IENG +FYTLA
Sbjct: 61  MSCQTLSQETLPGVDLYVTLEPCTMCAAAISFARIRRLYYGASNPKGGAIENGIEFYTLA 120

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
           TCHH PEIY GI+E+RS+QI+Q FFKERR
Sbjct: 121 TCHHKPEIYSGIAEKRSKQIMQKFFKERR 149


>gi|22125207|ref|NP_668630.1| tRNA-specific adenosine deaminase [Yersinia pestis KIM 10]
 gi|162421541|ref|YP_001607945.1| tRNA-specific adenosine deaminase [Yersinia pestis Angola]
 gi|165928230|ref|ZP_02224062.1| tRNA-specific adenosine deaminase [Yersinia pestis biovar
           Orientalis str. F1991016]
 gi|165939213|ref|ZP_02227763.1| tRNA-specific adenosine deaminase [Yersinia pestis biovar
           Orientalis str. IP275]
 gi|166008235|ref|ZP_02229133.1| tRNA-specific adenosine deaminase [Yersinia pestis biovar Antiqua
           str. E1979001]
 gi|166212350|ref|ZP_02238385.1| tRNA-specific adenosine deaminase [Yersinia pestis biovar Antiqua
           str. B42003004]
 gi|167399598|ref|ZP_02305122.1| tRNA-specific adenosine deaminase [Yersinia pestis biovar Antiqua
           str. UG05-0454]
 gi|167421139|ref|ZP_02312892.1| tRNA-specific adenosine deaminase [Yersinia pestis biovar
           Orientalis str. MG05-1020]
 gi|167423684|ref|ZP_02315437.1| tRNA-specific adenosine deaminase [Yersinia pestis biovar
           Mediaevalis str. K1973002]
 gi|167467717|ref|ZP_02332421.1| tRNA-specific adenosine deaminase [Yersinia pestis FV-1]
 gi|270489818|ref|ZP_06206892.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Yersinia pestis KIM D27]
 gi|294504520|ref|YP_003568582.1| deaminase [Yersinia pestis Z176003]
 gi|21958073|gb|AAM84881.1|AE013733_2 putative deaminase [Yersinia pestis KIM 10]
 gi|162354356|gb|ABX88304.1| tRNA-specific adenosine deaminase [Yersinia pestis Angola]
 gi|165912813|gb|EDR31440.1| tRNA-specific adenosine deaminase [Yersinia pestis biovar
           Orientalis str. IP275]
 gi|165919737|gb|EDR37070.1| tRNA-specific adenosine deaminase [Yersinia pestis biovar
           Orientalis str. F1991016]
 gi|165992617|gb|EDR44918.1| tRNA-specific adenosine deaminase [Yersinia pestis biovar Antiqua
           str. E1979001]
 gi|166206281|gb|EDR50761.1| tRNA-specific adenosine deaminase [Yersinia pestis biovar Antiqua
           str. B42003004]
 gi|166960628|gb|EDR56649.1| tRNA-specific adenosine deaminase [Yersinia pestis biovar
           Orientalis str. MG05-1020]
 gi|167052102|gb|EDR63510.1| tRNA-specific adenosine deaminase [Yersinia pestis biovar Antiqua
           str. UG05-0454]
 gi|167057854|gb|EDR67600.1| tRNA-specific adenosine deaminase [Yersinia pestis biovar
           Mediaevalis str. K1973002]
 gi|262362488|gb|ACY59209.1| deaminase [Yersinia pestis D106004]
 gi|262366507|gb|ACY63064.1| deaminase [Yersinia pestis D182038]
 gi|270338322|gb|EFA49099.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Yersinia pestis KIM D27]
 gi|294354979|gb|ADE65320.1| deaminase [Yersinia pestis Z176003]
          Length = 200

 Score =  217 bits (555), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 59/147 (40%), Positives = 77/147 (52%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
               +M  AL  A  A    E+PVGAV VL NK+I    NR     D TAHAEI+A+R G
Sbjct: 37  SDEYWMRHALTLALRAQEEGEVPVGAVLVLGNKVIGEGWNRPIRDNDPTAHAEIMALRQG 96

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
            + +    L +  LYVTLEPC MCA A+  +RIRRL YGA++ K G   +          
Sbjct: 97  GQAVQNYRLLDATLYVTLEPCVMCAGAMVHSRIRRLVYGANDVKTGAAGSLVDILRHPGM 156

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H  E+  GI        +  FF++RR
Sbjct: 157 NHQIEVSAGILAIACSHQLSAFFRQRR 183


>gi|291085019|ref|ZP_06351792.2| tRNA-specific adenosine deaminase [Citrobacter youngae ATCC 29220]
 gi|291071670|gb|EFE09779.1| tRNA-specific adenosine deaminase [Citrobacter youngae ATCC 29220]
          Length = 154

 Score =  217 bits (555), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 56/142 (39%), Positives = 76/142 (53%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  AL  A+ A    E+PVGAV V NN++I    NR     D TAHAEI+A+R G  +L 
Sbjct: 1   MRHALTLAKRAWDEREVPVGAVLVHNNRVIGEGWNRPIGHHDPTAHAEIMALRQGGLVLQ 60

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
              L +  LYVTLEPC MCA A+  +RI R+ +GA + K G   +          +H  E
Sbjct: 61  NYRLLDATLYVTLEPCVMCAGAMVHSRIGRVVFGARDAKTGAAGSLMDVLHHPGMNHRVE 120

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
           +  G+       ++ DFF+ RR
Sbjct: 121 VTEGVLRDECATLLSDFFRMRR 142


>gi|289577296|ref|YP_003475923.1| CMP/dCMP deaminase zinc-binding protein [Thermoanaerobacter
           italicus Ab9]
 gi|289527009|gb|ADD01361.1| CMP/dCMP deaminase zinc-binding protein [Thermoanaerobacter
           italicus Ab9]
          Length = 148

 Score =  217 bits (555), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 59/145 (40%), Positives = 80/145 (55%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           N FM  A+ EA  +    E+PVGAV V +++II R  N+     DVTAHAEI+AI+  C+
Sbjct: 3   NKFMKAAILEANKSYQLREVPVGAVIVKDDQIIGRGFNQKEATNDVTAHAEIMAIKEACK 62

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
            L    L +  +YVTLEPC MCA AI  ARI+R+Y G  + K G                
Sbjct: 63  TLGSWRLDDCSIYVTLEPCPMCAGAILEARIKRVYIGTESDKSGAAGTVINLLNNPDLGS 122

Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149
             E+Y GI E   + ++++FFK  R
Sbjct: 123 KTEVYFGIMEDECKMLLENFFKTLR 147


>gi|148985360|ref|ZP_01818565.1| adenylosuccinate synthetase [Streptococcus pneumoniae SP3-BS71]
 gi|148986205|ref|ZP_01819157.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus
           pneumoniae SP3-BS71]
 gi|148995215|ref|ZP_01824050.1| deoxyuridine 5'-triphosphate nucleotidohydrolase [Streptococcus
           pneumoniae SP9-BS68]
 gi|149004172|ref|ZP_01828969.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus
           pneumoniae SP14-BS69]
 gi|149023458|ref|ZP_01836047.1| adenylosuccinate synthetase [Streptococcus pneumoniae SP23-BS72]
 gi|168483689|ref|ZP_02708641.1| tRNA-specific adenosine deaminase [Streptococcus pneumoniae
           CDC1873-00]
 gi|168486729|ref|ZP_02711237.1| tRNA-specific adenosine deaminase [Streptococcus pneumoniae
           CDC1087-00]
 gi|169833520|ref|YP_001693493.1| tRNA-specific adenosine deaminase [Streptococcus pneumoniae
           Hungary19A-6]
 gi|221230966|ref|YP_002510118.1| deaminase [Streptococcus pneumoniae ATCC 700669]
 gi|225853633|ref|YP_002735145.1| tRNA-specific adenosine deaminase [Streptococcus pneumoniae JJA]
 gi|225857883|ref|YP_002739393.1| tRNA-specific adenosine deaminase [Streptococcus pneumoniae 70585]
 gi|237650015|ref|ZP_04524267.1| tRNA-specific adenosine deaminase [Streptococcus pneumoniae CCRI
           1974]
 gi|237822610|ref|ZP_04598455.1| tRNA-specific adenosine deaminase [Streptococcus pneumoniae CCRI
           1974M2]
 gi|147757834|gb|EDK64845.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus
           pneumoniae SP14-BS69]
 gi|147921819|gb|EDK72947.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus
           pneumoniae SP3-BS71]
 gi|147922318|gb|EDK73438.1| adenylosuccinate synthetase [Streptococcus pneumoniae SP3-BS71]
 gi|147926817|gb|EDK77872.1| deoxyuridine 5'-triphosphate nucleotidohydrolase [Streptococcus
           pneumoniae SP9-BS68]
 gi|147929781|gb|EDK80771.1| adenylosuccinate synthetase [Streptococcus pneumoniae SP23-BS72]
 gi|168996022|gb|ACA36634.1| tRNA-specific adenosine deaminase [Streptococcus pneumoniae
           Hungary19A-6]
 gi|172043028|gb|EDT51074.1| tRNA-specific adenosine deaminase [Streptococcus pneumoniae
           CDC1873-00]
 gi|183570307|gb|EDT90835.1| tRNA-specific adenosine deaminase [Streptococcus pneumoniae
           CDC1087-00]
 gi|220673426|emb|CAR67886.1| putative deaminase [Streptococcus pneumoniae ATCC 700669]
 gi|225721389|gb|ACO17243.1| tRNA-specific adenosine deaminase [Streptococcus pneumoniae 70585]
 gi|225723035|gb|ACO18888.1| tRNA-specific adenosine deaminase [Streptococcus pneumoniae JJA]
 gi|301793341|emb|CBW35702.1| putative deaminase [Streptococcus pneumoniae INV104]
 gi|301799211|emb|CBW31724.1| putative deaminase [Streptococcus pneumoniae OXC141]
 gi|332075677|gb|EGI86144.1| cytidine and deoxycytidylate deaminase zinc-binding region family
           protein [Streptococcus pneumoniae GA17570]
 gi|332204048|gb|EGJ18113.1| cytidine and deoxycytidylate deaminase zinc-binding region family
           protein [Streptococcus pneumoniae GA47901]
 gi|332205041|gb|EGJ19104.1| cytidine and deoxycytidylate deaminase zinc-binding region family
           protein [Streptococcus pneumoniae GA47368]
          Length = 155

 Score =  217 bits (555), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 60/149 (40%), Positives = 80/149 (53%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +++  VFM  AL EA+ A   +EIP+G V V + +II R  N   EL+    HAEI+AI 
Sbjct: 5   LEEKEVFMREALREAEIALEHDEIPIGCVIVKDGEIIGRGHNAREELQRAVMHAEIMAIE 64

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
                     L +  L+VT+EPC MC+ AI LARI  + YGA N K G   +     T  
Sbjct: 65  DANLSEESWRLLDCTLFVTIEPCVMCSGAIGLARIPNVVYGAKNQKFGAAGSLYDILTDE 124

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  E+  GI E     I+QDFF+ RR
Sbjct: 125 RLNHRVEVEIGILEDECAAIMQDFFRNRR 153


>gi|225026664|ref|ZP_03715856.1| hypothetical protein EUBHAL_00916 [Eubacterium hallii DSM 3353]
 gi|224956034|gb|EEG37243.1| hypothetical protein EUBHAL_00916 [Eubacterium hallii DSM 3353]
          Length = 178

 Score =  217 bits (554), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 49/148 (33%), Positives = 83/148 (56%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
            +   FM  A+++A+ A    ++P+G V V + KII+R  N+  + K V AHAE+LA++ 
Sbjct: 10  TEDEKFMKEAIKQAKKAEAIGDVPIGCVIVHDGKIIARGYNKRNKDKTVLAHAELLAMKK 69

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
            C+ L    L +  +Y+TLEPC MCA AI  AR+ R+  G+ N K G   +      +  
Sbjct: 70  ACKKLGDWRLEDCTMYITLEPCQMCAGAIVQARVTRVVIGSMNAKAGCGGSILNLLEMQE 129

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H  E+  G+ ++   +++  FF++ R
Sbjct: 130 FNHQAEVERGVLQEECSEMLSAFFRKLR 157


>gi|153824574|ref|ZP_01977241.1| zinc-binding domain protein [Vibrio cholerae MZO-2]
 gi|149741792|gb|EDM55821.1| zinc-binding domain protein [Vibrio cholerae MZO-2]
          Length = 193

 Score =  217 bits (554), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 55/147 (37%), Positives = 79/147 (53%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
           +   FM  A+  A  A  + E+PVGAV V + +II+   N +    D TAHAEI  IR  
Sbjct: 27  QDEQFMRRAIVLAAQAEAQGEVPVGAVLVRDGEIIAEGWNGSITNHDATAHAEIEVIRKA 86

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
            + LS   L +  LYVTLEPC MCA A+  +R++R+ YGA + K G        ++    
Sbjct: 87  GKALSNYRLLDTTLYVTLEPCPMCAGALLHSRVKRIVYGAPDLKAGAAGTVLDLFSSQAA 146

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H   +  G+ E+  R  +Q FF+ RR
Sbjct: 147 YHYATVEKGLLEEECRAQLQAFFQRRR 173


>gi|75676735|ref|YP_319156.1| cytidine/deoxycytidylate deaminase, zinc-binding region
           [Nitrobacter winogradskyi Nb-255]
 gi|74421605|gb|ABA05804.1| tRNA-adenosine deaminase [Nitrobacter winogradskyi Nb-255]
          Length = 148

 Score =  217 bits (554), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 79/143 (55%), Positives = 100/143 (69%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  ALE A+ A    E+P+G V V + +II+ AGNR    +D TAHAE+LA+R    +L
Sbjct: 6   FMDMALEAAEKAGQAGEVPIGCVIVRDGEIIAAAGNRTLTDRDPTAHAEVLALRAAAHVL 65

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
             E L   DLYVTLEPCTMCAAAIS ARIRRLYYGAS+PKGG +E G +F+   TCHH P
Sbjct: 66  GSERLTGCDLYVTLEPCTMCAAAISFARIRRLYYGASDPKGGAVEYGVRFFAAPTCHHRP 125

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+Y  + E ++  +++DFFK RR
Sbjct: 126 EVYSSVGESQAATLLRDFFKARR 148


>gi|315633684|ref|ZP_07888974.1| tRNA-specific adenosine deaminase [Aggregatibacter segnis ATCC
           33393]
 gi|315477726|gb|EFU68468.1| tRNA-specific adenosine deaminase [Aggregatibacter segnis ATCC
           33393]
          Length = 175

 Score =  217 bits (554), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 61/147 (41%), Positives = 82/147 (55%), Gaps = 1/147 (0%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMG 62
              FM  AL  A  A    EIPVGAV V    +II    N +    D TAHAEI+A+R G
Sbjct: 9   DEQFMRHALMLADKAEALGEIPVGAVLVSEEGEIIGEGWNLSIIDSDPTAHAEIVALRQG 68

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
            + L    L    LYVTLEPCTMCA AI  +RI+RL +GA++ K G + +   F+     
Sbjct: 69  GQRLQNYRLLNATLYVTLEPCTMCAGAILHSRIKRLVFGAADYKTGAVGSRFHFFDDYKM 128

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H+ EI  G+ +Q   + +  FF++RR
Sbjct: 129 NHAIEITGGVLQQECSEKLSAFFQKRR 155


>gi|210631978|ref|ZP_03297143.1| hypothetical protein COLSTE_01034 [Collinsella stercoris DSM 13279]
 gi|210159780|gb|EEA90751.1| hypothetical protein COLSTE_01034 [Collinsella stercoris DSM 13279]
          Length = 647

 Score =  217 bits (554), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 58/146 (39%), Positives = 82/146 (56%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
              FMS ALEEA+ AA   E+P+GAV V   ++I+RA NR    +D +AHAE  A+    
Sbjct: 8   DERFMSMALEEARAAASIGEVPIGAVVVHEGRVIARAHNRREADEDPSAHAEFAAMMEAS 67

Query: 64  RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123
           R L +  L    +YVTLEPC MCA  +  ARI R  +GA +PKGG +            +
Sbjct: 68  RALGRWRLTGCTVYVTLEPCLMCAGLMVNARIDRCVFGAYDPKGGAVGTLYDVSCDERLN 127

Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149
           H+ ++ PG+ E     +++ FF+E R
Sbjct: 128 HAFDVTPGVLEDECAAVLRAFFQELR 153


>gi|15899968|ref|NP_344572.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus
           pneumoniae TIGR4]
 gi|111657255|ref|ZP_01408023.1| hypothetical protein SpneT_02001535 [Streptococcus pneumoniae
           TIGR4]
 gi|148996424|ref|ZP_01824142.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus
           pneumoniae SP11-BS70]
 gi|149010880|ref|ZP_01832185.1| adenylosuccinate synthetase [Streptococcus pneumoniae SP19-BS75]
 gi|168492307|ref|ZP_02716450.1| tRNA-specific adenosine deaminase [Streptococcus pneumoniae
           CDC0288-04]
 gi|168576944|ref|ZP_02722786.1| tRNA-specific adenosine deaminase [Streptococcus pneumoniae
           MLV-016]
 gi|225855809|ref|YP_002737320.1| tRNA-specific adenosine deaminase [Streptococcus pneumoniae P1031]
 gi|307066702|ref|YP_003875668.1| cytosine/adenosine deaminase [Streptococcus pneumoniae AP200]
 gi|14971484|gb|AAK74212.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus
           pneumoniae TIGR4]
 gi|147756999|gb|EDK64038.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus
           pneumoniae SP11-BS70]
 gi|147764516|gb|EDK71446.1| adenylosuccinate synthetase [Streptococcus pneumoniae SP19-BS75]
 gi|183573448|gb|EDT93976.1| tRNA-specific adenosine deaminase [Streptococcus pneumoniae
           CDC0288-04]
 gi|183577431|gb|EDT97959.1| tRNA-specific adenosine deaminase [Streptococcus pneumoniae
           MLV-016]
 gi|225725405|gb|ACO21257.1| tRNA-specific adenosine deaminase [Streptococcus pneumoniae P1031]
 gi|306408239|gb|ADM83666.1| Cytosine/adenosine deaminase [Streptococcus pneumoniae AP200]
 gi|332077311|gb|EGI87772.1| cytidine and deoxycytidylate deaminase zinc-binding region family
           protein [Streptococcus pneumoniae GA41301]
 gi|332201950|gb|EGJ16019.1| cytidine and deoxycytidylate deaminase zinc-binding region family
           protein [Streptococcus pneumoniae GA41317]
          Length = 155

 Score =  217 bits (554), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 60/149 (40%), Positives = 80/149 (53%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +++  VFM  AL EA+ A   +EIP+G V V + +II R  N   EL+    HAEI+AI 
Sbjct: 5   LEEKEVFMREALREAEIALEHDEIPIGCVIVKDGEIIGRGHNAREELQRAVMHAEIMAIE 64

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
                     L +  L+VT+EPC MC+ AI LARI  + YGA N K G   +     T  
Sbjct: 65  DANLSEESWRLLDCTLFVTIEPCVMCSGAIGLARIPNVVYGAKNQKFGAAGSLYNILTDE 124

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  E+  GI E     I+QDFF+ RR
Sbjct: 125 RLNHRVEVEIGILEDECAAIMQDFFRNRR 153


>gi|307706899|ref|ZP_07643700.1| tRNA-specific adenosine deaminase [Streptococcus mitis SK321]
 gi|307617691|gb|EFN96857.1| tRNA-specific adenosine deaminase [Streptococcus mitis SK321]
          Length = 155

 Score =  217 bits (554), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 60/148 (40%), Positives = 78/148 (52%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           ++  VFM  AL EA+ A   +EIP+G V V   +II R  N   EL+    HAEI+AI  
Sbjct: 6   EEKEVFMREALREAEIALEHDEIPIGCVIVKEGEIIGRGHNAREELQRAVMHAEIMAIEN 65

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
                    L +  L+VT+EPC MC+ AI LARI  + YGA N K G   +     T   
Sbjct: 66  ANLSEESWRLLDCTLFVTIEPCVMCSGAIGLARIPNVVYGAKNQKFGAAGSLYDILTDER 125

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H  E+  GI E     I+QDFF+ RR
Sbjct: 126 LNHRVEVETGILEDECAAIMQDFFRNRR 153


>gi|327459989|gb|EGF06328.1| tRNA-specific adenosine deaminase [Streptococcus sanguinis SK1]
          Length = 156

 Score =  217 bits (554), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 60/149 (40%), Positives = 84/149 (56%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +++   FM  AL+EA+ A   +EIP+G V V   KII R  N   EL+    HAEI+AI 
Sbjct: 6   IEEKEAFMREALKEAEIALAHDEIPIGCVLVKEGKIIGRGHNAREELQRAVMHAEIMAIE 65

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              R  +   L +  L+VT+EPC MC+ AI LARI  + YGA+N K G   +     T  
Sbjct: 66  EANRHENSWRLLDTTLFVTIEPCVMCSGAIGLARIPHVIYGAANQKFGAAGSLYDILTDE 125

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  E+  G+ ++   QI+QDFF+ RR
Sbjct: 126 RLNHRVEVETGVLQEECAQIMQDFFRNRR 154


>gi|15640880|ref|NP_230511.1| yfhC protein [Vibrio cholerae O1 biovar El Tor str. N16961]
 gi|121585742|ref|ZP_01675537.1| zinc-binding domain protein [Vibrio cholerae 2740-80]
 gi|121728321|ref|ZP_01681351.1| zinc-binding domain protein [Vibrio cholerae V52]
 gi|147675155|ref|YP_001216345.1| zinc-binding domain-containing protein [Vibrio cholerae O395]
 gi|153802057|ref|ZP_01956643.1| zinc-binding domain protein [Vibrio cholerae MZO-3]
 gi|153819008|ref|ZP_01971675.1| zinc-binding domain protein [Vibrio cholerae NCTC 8457]
 gi|153823068|ref|ZP_01975735.1| zinc-binding domain protein [Vibrio cholerae B33]
 gi|227081040|ref|YP_002809591.1| yfhC protein [Vibrio cholerae M66-2]
 gi|229505525|ref|ZP_04395035.1| tRNA-specific adenosine-34 deaminase [Vibrio cholerae BX 330286]
 gi|229510804|ref|ZP_04400283.1| tRNA-specific adenosine-34 deaminase [Vibrio cholerae B33]
 gi|229517925|ref|ZP_04407369.1| tRNA-specific adenosine-34 deaminase [Vibrio cholerae RC9]
 gi|229608545|ref|YP_002879193.1| tRNA-specific adenosine-34 deaminase [Vibrio cholerae MJ-1236]
 gi|254848002|ref|ZP_05237352.1| zinc-binding domain-containing protein [Vibrio cholerae MO10]
 gi|298499008|ref|ZP_07008815.1| zinc-binding domain-containing protein [Vibrio cholerae MAK 757]
 gi|9655317|gb|AAF94026.1| yfhC protein [Vibrio cholerae O1 biovar El Tor str. N16961]
 gi|121550105|gb|EAX60121.1| zinc-binding domain protein [Vibrio cholerae 2740-80]
 gi|121629376|gb|EAX61806.1| zinc-binding domain protein [Vibrio cholerae V52]
 gi|124122416|gb|EAY41159.1| zinc-binding domain protein [Vibrio cholerae MZO-3]
 gi|126510441|gb|EAZ73035.1| zinc-binding domain protein [Vibrio cholerae NCTC 8457]
 gi|126519394|gb|EAZ76617.1| zinc-binding domain protein [Vibrio cholerae B33]
 gi|146317038|gb|ABQ21577.1| zinc-binding domain protein [Vibrio cholerae O395]
 gi|227008928|gb|ACP05140.1| yfhC protein [Vibrio cholerae M66-2]
 gi|227012684|gb|ACP08894.1| yfhC protein [Vibrio cholerae O395]
 gi|229344640|gb|EEO09614.1| tRNA-specific adenosine-34 deaminase [Vibrio cholerae RC9]
 gi|229350769|gb|EEO15710.1| tRNA-specific adenosine-34 deaminase [Vibrio cholerae B33]
 gi|229357748|gb|EEO22665.1| tRNA-specific adenosine-34 deaminase [Vibrio cholerae BX 330286]
 gi|229371200|gb|ACQ61623.1| tRNA-specific adenosine-34 deaminase [Vibrio cholerae MJ-1236]
 gi|254843707|gb|EET22121.1| zinc-binding domain-containing protein [Vibrio cholerae MO10]
 gi|297543341|gb|EFH79391.1| zinc-binding domain-containing protein [Vibrio cholerae MAK 757]
          Length = 193

 Score =  217 bits (554), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 55/147 (37%), Positives = 79/147 (53%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
           +   FM  A+  A  A  + E+PVGAV V + +II+   N +    D TAHAEI  IR  
Sbjct: 27  QDEQFMRRAIVLAAQAEAQGEVPVGAVLVRDGEIIAEGWNGSITNHDATAHAEIEVIRKA 86

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
            + LS   L +  LYVTLEPC MCA A+  +R++R+ YGA + K G        ++    
Sbjct: 87  GKALSNYRLLDTTLYVTLEPCPMCAGALLHSRVKRIVYGAPDLKAGAAGTVMDLFSSQAA 146

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H   +  G+ E+  R  +Q FF+ RR
Sbjct: 147 YHYATVEKGLLEEECRAQLQAFFQRRR 173


>gi|254225102|ref|ZP_04918716.1| zinc-binding domain protein [Vibrio cholerae V51]
 gi|125622489|gb|EAZ50809.1| zinc-binding domain protein [Vibrio cholerae V51]
          Length = 193

 Score =  217 bits (554), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 55/147 (37%), Positives = 79/147 (53%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
           +   FM  A+  A  A  + E+PVGAV V + +II+   N +    D TAHAEI  IR  
Sbjct: 27  QDEQFMRRAIVLAAQAEAQGEVPVGAVLVRDGEIIAEGWNGSITNHDATAHAEIEVIRKA 86

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
            + LS   L +  LYVTLEPC MCA A+  +R++R+ YGA + K G        ++    
Sbjct: 87  GKALSNYRLLDTTLYVTLEPCPMCAGALLHSRVKRIVYGAPDLKAGAAGTVMDLFSSQAA 146

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H   +  G+ E+  R  +Q FF+ RR
Sbjct: 147 YHYATVEKGLLEEECRAQLQAFFQRRR 173


>gi|118590701|ref|ZP_01548102.1| cytidine and deoxycytidylate deaminase [Stappia aggregata IAM
           12614]
 gi|118436677|gb|EAV43317.1| cytidine and deoxycytidylate deaminase [Stappia aggregata IAM
           12614]
          Length = 154

 Score =  217 bits (554), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 80/143 (55%), Positives = 103/143 (72%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  ALEEA  AA R E+PVGAV V    +I+R GNR  EL D TAHAE+L IR  C + 
Sbjct: 12  FMDLALEEAVKAADRGEVPVGAVLVRGGDVIARDGNRTLELNDPTAHAEVLVIRSACALA 71

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
             + LP+ DLYVTLEPC MCA AIS ARIRRLYYGA + KGG +++GT+F+   TCHH+P
Sbjct: 72  GSQRLPDCDLYVTLEPCPMCAGAISFARIRRLYYGAGDEKGGAVDHGTRFFCQPTCHHAP 131

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           ++Y GI E R+ ++++ FF+ +R
Sbjct: 132 DVYSGIGETRAGELLKTFFQAKR 154


>gi|260913765|ref|ZP_05920241.1| tRNA-specific adenosine deaminase [Pasteurella dagmatis ATCC 43325]
 gi|260632304|gb|EEX50479.1| tRNA-specific adenosine deaminase [Pasteurella dagmatis ATCC 43325]
          Length = 170

 Score =  217 bits (554), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 60/147 (40%), Positives = 81/147 (55%), Gaps = 1/147 (0%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMG 62
              +M  ALE A  A    EIPVGAV V     ++    N +    D TAHAEI+A+R G
Sbjct: 6   DEKWMRYALELADKAEQLGEIPVGAVLVDEEGNVLGEGWNLSIIESDPTAHAEIVALRQG 65

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
            + L    L    LYVTLEPCTMCA AI  +RI+RL +GAS+ K G + +   F+     
Sbjct: 66  GKTLQNYRLVNTTLYVTLEPCTMCAGAILHSRIKRLVFGASDYKTGAVGSRFHFFDDYKM 125

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H+ EI  G+ +    Q +  FF++RR
Sbjct: 126 NHTVEITAGVLQDECSQKLSVFFQKRR 152


>gi|332754174|gb|EGJ84543.1| tRNA-specific adenosine deaminase [Shigella flexneri K-671]
          Length = 156

 Score =  217 bits (554), Expect = 5e-55,   Method: Composition-based stats.
 Identities = 57/142 (40%), Positives = 76/142 (53%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  AL  A+ A    E+PVGAV V NN++I    NR     D TAHAEI+A+R G  ++ 
Sbjct: 1   MRHALTLAKRAWDEREVPVGAVLVHNNRVIGEGWNRPIGRHDPTAHAEIMALRQGGLVMQ 60

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
              L +  LYVTLEPC MCA A+  +RI R+ +GA + K G   +          +H  E
Sbjct: 61  NYRLIDATLYVTLEPCVMCAGAMIHSRIGRVVFGARDAKTGAAGSLMDVLHHPGMNHRVE 120

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
           I  GI       ++ DFF+ RR
Sbjct: 121 ITEGILADECAALLSDFFRMRR 142


>gi|262402782|ref|ZP_06079343.1| tRNA-specific adenosine-34 deaminase [Vibrio sp. RC586]
 gi|262351564|gb|EEZ00697.1| tRNA-specific adenosine-34 deaminase [Vibrio sp. RC586]
          Length = 170

 Score =  217 bits (554), Expect = 5e-55,   Method: Composition-based stats.
 Identities = 57/148 (38%), Positives = 79/148 (53%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
            +   FM  A+E A  A    E+PVGAV V   KII+   N +   +D TAHAEI  IR 
Sbjct: 8   TQDEQFMRRAIELAAQAEALGEVPVGAVLVQEGKIIAEGWNCSITHQDATAHAEIEVIRE 67

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
             ++LS   L +  LYVTLEPC MCA A+  +R++R+ YGA + K G        +    
Sbjct: 68  AGKVLSNYRLLDTTLYVTLEPCPMCAGALLHSRVKRIVYGAPDLKAGAAGTVMDLFNSQA 127

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H   +  G+ E+  R  +Q FF+ RR
Sbjct: 128 SYHYATVEKGLLEEECRTQLQAFFQRRR 155


>gi|125718966|ref|YP_001036099.1| hypothetical protein SSA_2184 [Streptococcus sanguinis SK36]
 gi|125498883|gb|ABN45549.1| Conserved hypothetical protein [Streptococcus sanguinis SK36]
          Length = 156

 Score =  217 bits (554), Expect = 5e-55,   Method: Composition-based stats.
 Identities = 59/149 (39%), Positives = 85/149 (57%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +++   FM  AL+EA+ A   +EIP+G V V   KII R  N   EL+    HAEI+AI 
Sbjct: 6   IEEKEAFMREALKEAEIALAHDEIPIGCVLVKEGKIIGRGHNAREELQRAVMHAEIMAIE 65

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              R  +   L +  L+VT+EPC MC+ AI LARI  + YGA+N K G   +     T  
Sbjct: 66  EANRHENSWRLLDTTLFVTIEPCVMCSGAIGLARIPHVVYGAANQKFGAAGSLYDILTDE 125

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  E+  G+ ++   QI+Q+FF++RR
Sbjct: 126 RLNHRVEVEAGVLQEECAQIMQEFFRQRR 154


>gi|324995886|gb|EGC27797.1| tRNA-specific adenosine deaminase [Streptococcus sanguinis SK678]
 gi|325695392|gb|EGD37292.1| tRNA-specific adenosine deaminase [Streptococcus sanguinis SK150]
 gi|327488579|gb|EGF20379.1| tRNA-specific adenosine deaminase [Streptococcus sanguinis SK1058]
 gi|328944679|gb|EGG38840.1| tRNA-specific adenosine deaminase [Streptococcus sanguinis SK1087]
          Length = 156

 Score =  217 bits (553), Expect = 5e-55,   Method: Composition-based stats.
 Identities = 59/149 (39%), Positives = 85/149 (57%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +++   FM  AL+EA+ A   +EIP+G V V   KII R  N   EL+    HAEI+AI 
Sbjct: 6   IEEKEAFMREALKEAEIALAYDEIPIGCVLVKEGKIIGRGHNAREELQRAVMHAEIMAIE 65

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              R  +   L +  L+VT+EPC MC+ AI LARI  + YGA+N K G   +     T  
Sbjct: 66  EANRHENSWRLLDTTLFVTIEPCVMCSGAIGLARIPHVVYGAANQKFGAAGSLYDILTDE 125

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  E+  G+ ++   QI+Q+FF++RR
Sbjct: 126 RLNHRVEVETGVLQEECAQIMQEFFRQRR 154


>gi|62317152|ref|YP_223005.1| cytidine and deoxycytidylate deaminase family protein [Brucella
           abortus bv. 1 str. 9-941]
 gi|83269135|ref|YP_418426.1| cytidine/deoxycytidylate deaminase [Brucella melitensis biovar
           Abortus 2308]
 gi|161620282|ref|YP_001594168.1| CMP/dCMP deaminase zinc-binding [Brucella canis ATCC 23365]
 gi|189022411|ref|YP_001932152.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [Brucella
           abortus S19]
 gi|254691365|ref|ZP_05154619.1| cytidine and deoxycytidylate deaminase family protein [Brucella
           abortus bv. 6 str. 870]
 gi|254695335|ref|ZP_05157163.1| cytidine and deoxycytidylate deaminase family protein [Brucella
           abortus bv. 3 str. Tulya]
 gi|254698431|ref|ZP_05160259.1| cytidine and deoxycytidylate deaminase family protein [Brucella
           abortus bv. 2 str. 86/8/59]
 gi|254699495|ref|ZP_05161323.1| cytidine and deoxycytidylate deaminase family protein [Brucella
           suis bv. 5 str. 513]
 gi|254702619|ref|ZP_05164447.1| cytidine and deoxycytidylate deaminase family protein [Brucella
           suis bv. 3 str. 686]
 gi|254706250|ref|ZP_05168078.1| cytidine and deoxycytidylate deaminase family protein [Brucella
           pinnipedialis M163/99/10]
 gi|254711456|ref|ZP_05173267.1| cytidine and deoxycytidylate deaminase family protein [Brucella
           pinnipedialis B2/94]
 gi|254712059|ref|ZP_05173870.1| cytidine and deoxycytidylate deaminase family protein [Brucella
           ceti M644/93/1]
 gi|254715129|ref|ZP_05176940.1| cytidine and deoxycytidylate deaminase family protein [Brucella
           ceti M13/05/1]
 gi|254731878|ref|ZP_05190456.1| cytidine and deoxycytidylate deaminase family protein [Brucella
           abortus bv. 4 str. 292]
 gi|256014990|ref|YP_003104999.1| cytidine and deoxycytidylate deaminase family protein [Brucella
           microti CCM 4915]
 gi|256029913|ref|ZP_05443527.1| cytidine and deoxycytidylate deaminase family protein [Brucella
           pinnipedialis M292/94/1]
 gi|256043124|ref|ZP_05446066.1| cytidine and deoxycytidylate deaminase family protein [Brucella
           melitensis bv. 1 str. Rev.1]
 gi|256059562|ref|ZP_05449761.1| cytidine and deoxycytidylate deaminase family protein [Brucella
           neotomae 5K33]
 gi|256111894|ref|ZP_05452850.1| cytidine and deoxycytidylate deaminase family protein [Brucella
           melitensis bv. 3 str. Ether]
 gi|256158082|ref|ZP_05456000.1| cytidine and deoxycytidylate deaminase family protein [Brucella
           ceti M490/95/1]
 gi|256252963|ref|ZP_05458499.1| cytidine and deoxycytidylate deaminase family protein [Brucella
           ceti B1/94]
 gi|256256550|ref|ZP_05462086.1| cytidine and deoxycytidylate deaminase family protein [Brucella
           abortus bv. 9 str. C68]
 gi|260166985|ref|ZP_05753796.1| cytidine and deoxycytidylate deaminase family protein [Brucella sp.
           F5/99]
 gi|260544385|ref|ZP_05820206.1| cytidine/deoxycytidylate deaminase [Brucella abortus NCTC 8038]
 gi|260564346|ref|ZP_05834831.1| cytidine/deoxycytidylate deaminase [Brucella melitensis bv. 1 str.
           16M]
 gi|260568473|ref|ZP_05838942.1| cytidine/deoxycytidylate deaminase [Brucella suis bv. 4 str. 40]
 gi|260756977|ref|ZP_05869325.1| CMP/dCMP deaminase zinc-binding protein [Brucella abortus bv. 6
           str. 870]
 gi|260759649|ref|ZP_05871997.1| CMP/dCMP deaminase zinc-binding protein [Brucella abortus bv. 4
           str. 292]
 gi|260762892|ref|ZP_05875224.1| CMP/dCMP deaminase zinc-binding protein [Brucella abortus bv. 2
           str. 86/8/59]
 gi|260882788|ref|ZP_05894402.1| cytidine/deoxycytidylate deaminase [Brucella abortus bv. 9 str.
           C68]
 gi|261215706|ref|ZP_05929987.1| CMP/dCMP deaminase zinc-binding protein [Brucella abortus bv. 3
           str. Tulya]
 gi|261216837|ref|ZP_05931118.1| CMP/dCMP deaminase zinc-binding protein [Brucella ceti M13/05/1]
 gi|261220056|ref|ZP_05934337.1| cytidine/deoxycytidylate deaminase [Brucella ceti B1/94]
 gi|261313693|ref|ZP_05952890.1| CMP/dCMP deaminase zinc-binding protein [Brucella pinnipedialis
           M163/99/10]
 gi|261319065|ref|ZP_05958262.1| CMP/dCMP deaminase zinc-binding protein [Brucella pinnipedialis
           B2/94]
 gi|261319704|ref|ZP_05958901.1| CMP/dCMP deaminase zinc-binding protein [Brucella ceti M644/93/1]
 gi|261323530|ref|ZP_05962727.1| cytidine/deoxycytidylate deaminase [Brucella neotomae 5K33]
 gi|261749950|ref|ZP_05993659.1| CMP/dCMP deaminase zinc-binding protein [Brucella suis bv. 5 str.
           513]
 gi|261753203|ref|ZP_05996912.1| CMP/dCMP deaminase zinc-binding protein [Brucella suis bv. 3 str.
           686]
 gi|261756372|ref|ZP_06000081.1| cytidine/deoxycytidylate deaminase [Brucella sp. F5/99]
 gi|265986931|ref|ZP_06099488.1| CMP/dCMP deaminase zinc-binding protein [Brucella pinnipedialis
           M292/94/1]
 gi|265989556|ref|ZP_06102113.1| CMP/dCMP deaminase zinc-binding protein [Brucella melitensis bv. 1
           str. Rev.1]
 gi|265993342|ref|ZP_06105899.1| cytidine/deoxycytidylate deaminase [Brucella melitensis bv. 3 str.
           Ether]
 gi|265996597|ref|ZP_06109154.1| CMP/dCMP deaminase zinc-binding protein [Brucella ceti M490/95/1]
 gi|294853219|ref|ZP_06793891.1| cytosine deaminase [Brucella sp. NVSL 07-0026]
 gi|62197345|gb|AAX75644.1| cytidine and deoxycytidylate deaminase family protein [Brucella
           abortus bv. 1 str. 9-941]
 gi|82939409|emb|CAJ12363.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [Brucella
           melitensis biovar Abortus 2308]
 gi|161337093|gb|ABX63397.1| CMP/dCMP deaminase zinc-binding [Brucella canis ATCC 23365]
 gi|189020985|gb|ACD73706.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [Brucella
           abortus S19]
 gi|255997650|gb|ACU49337.1| cytidine and deoxycytidylate deaminase family protein [Brucella
           microti CCM 4915]
 gi|260097656|gb|EEW81530.1| cytidine/deoxycytidylate deaminase [Brucella abortus NCTC 8038]
 gi|260151989|gb|EEW87082.1| cytidine/deoxycytidylate deaminase [Brucella melitensis bv. 1 str.
           16M]
 gi|260155138|gb|EEW90219.1| cytidine/deoxycytidylate deaminase [Brucella suis bv. 4 str. 40]
 gi|260669967|gb|EEX56907.1| CMP/dCMP deaminase zinc-binding protein [Brucella abortus bv. 4
           str. 292]
 gi|260673313|gb|EEX60134.1| CMP/dCMP deaminase zinc-binding protein [Brucella abortus bv. 2
           str. 86/8/59]
 gi|260677085|gb|EEX63906.1| CMP/dCMP deaminase zinc-binding protein [Brucella abortus bv. 6
           str. 870]
 gi|260872316|gb|EEX79385.1| cytidine/deoxycytidylate deaminase [Brucella abortus bv. 9 str.
           C68]
 gi|260917313|gb|EEX84174.1| CMP/dCMP deaminase zinc-binding protein [Brucella abortus bv. 3
           str. Tulya]
 gi|260918640|gb|EEX85293.1| cytidine/deoxycytidylate deaminase [Brucella ceti B1/94]
 gi|260921926|gb|EEX88494.1| CMP/dCMP deaminase zinc-binding protein [Brucella ceti M13/05/1]
 gi|261292394|gb|EEX95890.1| CMP/dCMP deaminase zinc-binding protein [Brucella ceti M644/93/1]
 gi|261298288|gb|EEY01785.1| CMP/dCMP deaminase zinc-binding protein [Brucella pinnipedialis
           B2/94]
 gi|261299510|gb|EEY03007.1| cytidine/deoxycytidylate deaminase [Brucella neotomae 5K33]
 gi|261302719|gb|EEY06216.1| CMP/dCMP deaminase zinc-binding protein [Brucella pinnipedialis
           M163/99/10]
 gi|261736356|gb|EEY24352.1| cytidine/deoxycytidylate deaminase [Brucella sp. F5/99]
 gi|261739703|gb|EEY27629.1| CMP/dCMP deaminase zinc-binding protein [Brucella suis bv. 5 str.
           513]
 gi|261742956|gb|EEY30882.1| CMP/dCMP deaminase zinc-binding protein [Brucella suis bv. 3 str.
           686]
 gi|262550894|gb|EEZ07055.1| CMP/dCMP deaminase zinc-binding protein [Brucella ceti M490/95/1]
 gi|262764212|gb|EEZ10244.1| cytidine/deoxycytidylate deaminase [Brucella melitensis bv. 3 str.
           Ether]
 gi|263000225|gb|EEZ12915.1| CMP/dCMP deaminase zinc-binding protein [Brucella melitensis bv. 1
           str. Rev.1]
 gi|264659128|gb|EEZ29389.1| CMP/dCMP deaminase zinc-binding protein [Brucella pinnipedialis
           M292/94/1]
 gi|294818874|gb|EFG35874.1| cytosine deaminase [Brucella sp. NVSL 07-0026]
          Length = 157

 Score =  217 bits (553), Expect = 5e-55,   Method: Composition-based stats.
 Identities = 93/142 (65%), Positives = 110/142 (77%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  ALEEA  A  R E+P+GAV V + +II+RAGNR RE  DVTAHAEIL IR    +L 
Sbjct: 16  MDIALEEAHAAGERGEVPIGAVIVRDGEIIARAGNRTREFNDVTAHAEILTIRQAGEMLG 75

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
            E L + DLYVTLEPC MCAAAIS ARIRRLYYGAS+PKGGGIE+G +FYT  TCHH+PE
Sbjct: 76  SERLIDCDLYVTLEPCAMCAAAISFARIRRLYYGASDPKGGGIEHGGRFYTQPTCHHAPE 135

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
           IYPG  E  +R+I++DFF+E+R
Sbjct: 136 IYPGFCEADARKILKDFFREKR 157


>gi|289166926|ref|YP_003445193.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus
           mitis B6]
 gi|288906491|emb|CBJ21321.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus
           mitis B6]
          Length = 155

 Score =  217 bits (553), Expect = 6e-55,   Method: Composition-based stats.
 Identities = 59/148 (39%), Positives = 78/148 (52%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           ++  VFM  AL EA  A   +EIP+G V V + +II R  N   EL+    HAEI+AI  
Sbjct: 6   EEKEVFMREALREADIALEHDEIPIGCVIVKDGEIIGRGHNAREELQRAVMHAEIMAIEN 65

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
                    L +  L+VT+EPC MC+ AI LARI  + YGA N K G   +     T   
Sbjct: 66  ANLSEESWRLIDCTLFVTIEPCVMCSGAIGLARIPNVVYGAKNQKFGAAGSLYDILTDER 125

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H  ++  GI E     I+QDFF+ RR
Sbjct: 126 LNHRVDVETGILEDECAAIMQDFFRNRR 153


>gi|292670885|ref|ZP_06604311.1| deaminase [Selenomonas noxia ATCC 43541]
 gi|292647506|gb|EFF65478.1| deaminase [Selenomonas noxia ATCC 43541]
          Length = 179

 Score =  217 bits (553), Expect = 6e-55,   Method: Composition-based stats.
 Identities = 64/150 (42%), Positives = 87/150 (58%), Gaps = 1/150 (0%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAI 59
           M      M  ALEEA++A    E+P+GAV +     +I+R  N      D TAHAE++AI
Sbjct: 26  MLDDITGMRMALEEAKHAYALGEVPIGAVIIDKAGTLIARGCNLRETQHDATAHAELIAI 85

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
           R  C+ L +  L E+ LYVT+EPC MCA AI ++RI R+ YG+++ K GG E+     + 
Sbjct: 86  RRACKSLGRWRLTEMTLYVTIEPCPMCAGAIVMSRISRIVYGSTDRKAGGCESLFNITSC 145

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
              +H PEI  GI       II+ FFKERR
Sbjct: 146 PGLNHQPEICAGILADECSAIIKKFFKERR 175


>gi|323350632|ref|ZP_08086294.1| tRNA-specific adenosine deaminase [Streptococcus sanguinis VMC66]
 gi|322123314|gb|EFX94999.1| tRNA-specific adenosine deaminase [Streptococcus sanguinis VMC66]
          Length = 156

 Score =  217 bits (553), Expect = 6e-55,   Method: Composition-based stats.
 Identities = 60/149 (40%), Positives = 84/149 (56%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +++   FM  AL+EA+ A   +EIP+G V V   KII R  N   EL+    HAEI+AI 
Sbjct: 6   IEEKEDFMREALKEAEIALAHDEIPIGCVLVKEGKIIGRGHNAREELQRAVMHAEIMAIE 65

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              R  +   L +  L+VT+EPC MC+ AI LARI  + YGA+N K G   +     T  
Sbjct: 66  EANRHENSWRLLDTTLFVTIEPCVMCSGAIGLARIPHVVYGAANQKFGAAGSLYDILTDE 125

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  E+  G+ ++   QI+QDFF+ RR
Sbjct: 126 RLNHRVEVETGVLQEDCAQIMQDFFRNRR 154


>gi|118586639|ref|ZP_01544079.1| cytidine/deoxycytidylate deaminase [Oenococcus oeni ATCC BAA-1163]
 gi|118432954|gb|EAV39680.1| cytidine/deoxycytidylate deaminase [Oenococcus oeni ATCC BAA-1163]
          Length = 156

 Score =  217 bits (553), Expect = 6e-55,   Method: Composition-based stats.
 Identities = 58/145 (40%), Positives = 86/145 (59%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
             FM  AL++AQ A    E+P+GAV V +N++I+   NR  +    TAHAE L I    R
Sbjct: 9   EEFMQLALKQAQTAFDEGEVPIGAVLVKDNQVIAADHNRKEQSGIATAHAEKLVIEGANR 68

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
            L    L +  L+VT+EPC MC  AI  +RI RL+YGA++PK GG+ +       +  +H
Sbjct: 69  SLGDWRLNDCSLFVTIEPCVMCCGAIIQSRIPRLFYGAADPKFGGVSSLYHLLEDSRSNH 128

Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149
             E+YP +  ++S  ++QDFF++ R
Sbjct: 129 FVEVYPDVLAKQSADLMQDFFRKLR 153


>gi|20428822|emb|CAD21697.1| hypothetical protein [Azoarcus evansii]
          Length = 154

 Score =  217 bits (553), Expect = 6e-55,   Method: Composition-based stats.
 Identities = 55/147 (37%), Positives = 81/147 (55%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
               +M  ALE+A+ A   +E+PVGAV VL+ +I+ R  N+     D TAHAE++A+R  
Sbjct: 2   NDEDYMRVALEQAREAGSCDEVPVGAVVVLDGEIVGRGFNQPIGRHDPTAHAEVMALRDA 61

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
              L    LP  +LYVTLEPC MC+ AI  +RI R+ +GA +PK G   +    +  +  
Sbjct: 62  AARLGNYRLPGCELYVTLEPCAMCSGAIMHSRIARVVFGARDPKTGVAGSVIDLFAESRL 121

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H   I  G+  +    ++  FF  RR
Sbjct: 122 NHHATISGGVLAEECGGLLSSFFAARR 148


>gi|262172118|ref|ZP_06039796.1| tRNA-specific adenosine-34 deaminase [Vibrio mimicus MB-451]
 gi|261893194|gb|EEY39180.1| tRNA-specific adenosine-34 deaminase [Vibrio mimicus MB-451]
          Length = 170

 Score =  216 bits (552), Expect = 6e-55,   Method: Composition-based stats.
 Identities = 55/147 (37%), Positives = 79/147 (53%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
           +   FM  A+  A  A  + E+PVGAV V + +II+   N +    D TAHAEI  IR  
Sbjct: 9   QDEQFMRRAIMLAAQAEEQGEVPVGAVLVRDGEIIAEGWNCSITHHDATAHAEIEVIRKA 68

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
            ++LS   L +  LYVTLEPC MCA A+  +R++R+ YGA + K G        +     
Sbjct: 69  GKVLSNYRLLDTTLYVTLEPCPMCAGALLHSRVKRIVYGAPDLKAGAAGTVMDLFNSQAS 128

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H   +  G+ E+  R  +Q FF+ RR
Sbjct: 129 YHYATVEKGLLEEECRAQLQAFFQRRR 155


>gi|184154758|ref|YP_001843098.1| cytosine/adenosine deaminase [Lactobacillus fermentum IFO 3956]
 gi|227514025|ref|ZP_03944074.1| nucleoside deaminase [Lactobacillus fermentum ATCC 14931]
 gi|260663213|ref|ZP_05864105.1| cytosine/adenosine deaminase [Lactobacillus fermentum 28-3-CHN]
 gi|183226102|dbj|BAG26618.1| cytosine/adenosine deaminase [Lactobacillus fermentum IFO 3956]
 gi|227087611|gb|EEI22923.1| nucleoside deaminase [Lactobacillus fermentum ATCC 14931]
 gi|260552405|gb|EEX25456.1| cytosine/adenosine deaminase [Lactobacillus fermentum 28-3-CHN]
          Length = 174

 Score =  216 bits (552), Expect = 6e-55,   Method: Composition-based stats.
 Identities = 56/143 (39%), Positives = 85/143 (59%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  A +EA  AAL  E+P+GAV V   KII R  N   + +D T HAE+LAI   C+ L
Sbjct: 10  YMKEAFKEANQAALLGEVPIGAVVVYKGKIIGRGHNMREKFQDATYHAEVLAIMEACQAL 69

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L E DLYVTLEPC MC+ AI  +RI+R+++ A + K G + +          +H  
Sbjct: 70  GSWRLEECDLYVTLEPCIMCSGAIINSRIKRVFFAAPDEKAGAVSSLYHLLEDTRLNHQV 129

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E++ G+ ++ + Q++++FF+  R
Sbjct: 130 EVHQGLMQEEASQMLKEFFRAIR 152


>gi|312862370|ref|ZP_07722613.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Streptococcus vestibularis F0396]
 gi|311102013|gb|EFQ60213.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Streptococcus vestibularis F0396]
          Length = 172

 Score =  216 bits (552), Expect = 7e-55,   Method: Composition-based stats.
 Identities = 57/148 (38%), Positives = 85/148 (57%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           ++   FMS AL+EAQ +  + EIP+G V V + +I+ R  N   EL     HAE++AI+ 
Sbjct: 7   EEKEFFMSEALKEAQKSLDKAEIPIGCVIVKDREIVGRGHNAREELNQAIMHAEVMAIQE 66

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
             R +    L +  L+VT+EPC MC+ AI LARI ++ YGA N K GG  +         
Sbjct: 67  ANRTVGNWRLLDCTLFVTIEPCVMCSGAIGLARIPKVIYGACNQKFGGAGSLYDILRDER 126

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H  E+  G+ E+   +I+QDFF++ R
Sbjct: 127 LNHRVEVETGVMEEECAKIMQDFFRQSR 154


>gi|260776578|ref|ZP_05885473.1| tRNA-specific adenosine-34 deaminase [Vibrio coralliilyticus ATCC
           BAA-450]
 gi|260607801|gb|EEX34066.1| tRNA-specific adenosine-34 deaminase [Vibrio coralliilyticus ATCC
           BAA-450]
          Length = 169

 Score =  216 bits (552), Expect = 7e-55,   Method: Composition-based stats.
 Identities = 54/147 (36%), Positives = 79/147 (53%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
           +   FM  A+E A  A    E+PVGAV V   +I++   N++    D TAHAE+  +R  
Sbjct: 9   QDEFFMRRAMELAAQAEAEGEVPVGAVLVKGGEIVAEGWNQSIGHHDATAHAEMQVLRKA 68

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
            ++L    L +  LYVTLEPC MCA A+  +R++R+ YGA + K G        +     
Sbjct: 69  GQVLENYRLLDTTLYVTLEPCPMCAGALLHSRVKRIVYGAPDLKAGAAGTVLNLFEHQAA 128

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H  +I  G+ E+  R  +Q FFK RR
Sbjct: 129 YHYADIEQGLMEEECRGQLQAFFKRRR 155


>gi|332528366|ref|ZP_08404366.1| CMP/dCMP deaminase [Hylemonella gracilis ATCC 19624]
 gi|332042237|gb|EGI78563.1| CMP/dCMP deaminase [Hylemonella gracilis ATCC 19624]
          Length = 375

 Score =  216 bits (552), Expect = 7e-55,   Method: Composition-based stats.
 Identities = 48/147 (32%), Positives = 76/147 (51%), Gaps = 6/147 (4%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNN------KIISRAGNRNRELKDVTAHA 54
           M     +M  AL++A  AA   E+PVGAV V  +      ++++ A N      D TAHA
Sbjct: 1   MNTDLEYMRMALDQAYRAAQAGEVPVGAVLVHQDPHGGADRVLATAHNTPIADHDPTAHA 60

Query: 55  EILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           E+ A+R    +L    L +  LYVTLEPC MCA A+  AR++R+ YGA++PK G   +  
Sbjct: 61  EMQALRAAGSVLGNYRLDDCTLYVTLEPCPMCAGAMLHARLKRVVYGAADPKTGAAGSVL 120

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQII 141
             +     +H  ++   +  +    ++
Sbjct: 121 DLFAHRQLNHQTQVQGSVLAEECGALL 147


>gi|322374121|ref|ZP_08048655.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus
           sp. C150]
 gi|321277087|gb|EFX54158.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus
           sp. C150]
          Length = 172

 Score =  216 bits (552), Expect = 7e-55,   Method: Composition-based stats.
 Identities = 56/148 (37%), Positives = 87/148 (58%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           ++ + FMS AL+EAQ +  + EIP+G V V + +I+ R  N   EL     HAE++AI+ 
Sbjct: 7   EEKDFFMSEALKEAQKSLDKAEIPIGCVIVKDGEIVGRGHNAREELNQAIMHAEVMAIQE 66

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
             R +    L +  L+VT+EPC MC+ AI LARI ++ YGASN K GG  +         
Sbjct: 67  ANRTIGNWRLLDCTLFVTIEPCVMCSGAIGLARIPKVIYGASNQKFGGAGSLYDILRDER 126

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H  ++  G+ E+   +I+Q+FF++ R
Sbjct: 127 LNHRVDLETGVMEKECAEIMQNFFRQSR 154


>gi|260221448|emb|CBA30021.1| hypothetical protein Csp_A15070 [Curvibacter putative symbiont of
           Hydra magnipapillata]
          Length = 408

 Score =  216 bits (552), Expect = 7e-55,   Method: Composition-based stats.
 Identities = 54/149 (36%), Positives = 82/149 (55%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           ++    FMS ALE+A  A L  E+PVGAV V   ++I++  NR  E  D +AHAE++A++
Sbjct: 4   IQSDEYFMSLALEQAIEAELAGEVPVGAVIVKGGQVIAKGRNRTIEWNDPSAHAEVVALK 63

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              R      L  + L+VTLEPC MC+ AI   RI R+ +GA++PK G   +    + + 
Sbjct: 64  EAARACGTHRLSGLQLFVTLEPCAMCSGAIFHGRIERVVFGAADPKTGCAGSVLNLFAVD 123

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  E+  G+       I+  FF+  R
Sbjct: 124 KLNHHAEVSGGVLSHECSDILVRFFERSR 152


>gi|261208197|ref|ZP_05922870.1| cytidine/deoxycytidylate deaminase [Enterococcus faecium TC 6]
 gi|289566587|ref|ZP_06447008.1| cytidine/deoxycytidylate deaminase [Enterococcus faecium D344SRF]
 gi|294615830|ref|ZP_06695673.1| tRNA-specific adenosine deaminase [Enterococcus faecium E1636]
 gi|260077454|gb|EEW65172.1| cytidine/deoxycytidylate deaminase [Enterococcus faecium TC 6]
 gi|289161632|gb|EFD09511.1| cytidine/deoxycytidylate deaminase [Enterococcus faecium D344SRF]
 gi|291591320|gb|EFF22986.1| tRNA-specific adenosine deaminase [Enterococcus faecium E1636]
          Length = 171

 Score =  216 bits (552), Expect = 7e-55,   Method: Composition-based stats.
 Identities = 53/143 (37%), Positives = 79/143 (55%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
           +   +M  AL EA+ A + +E+P+GAV VL+ K++ R  N     +D T HAE+LAI+  
Sbjct: 10  EKEKWMRLALAEAKKAEMLHEVPIGAVVVLDGKVVGRGYNLRETTQDATTHAEMLAIKEA 69

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
           C  +    L +  L+VTLEPC MC+ A+ L+R+  +Y+GA +PKGG              
Sbjct: 70  CEKVGSWRLEDATLFVTLEPCPMCSGAMILSRVAEVYFGAYDPKGGTAGTLMNLLEDERF 129

Query: 123 HHSPEIYPGISEQRSRQIIQDFF 145
           +H   +  GI E     I+ DFF
Sbjct: 130 NHQAYVEGGILEDECGMILTDFF 152


>gi|319940016|ref|ZP_08014370.1| tRNA-specific adenosine deaminase [Streptococcus anginosus
           1_2_62CV]
 gi|319810730|gb|EFW07057.1| tRNA-specific adenosine deaminase [Streptococcus anginosus
           1_2_62CV]
          Length = 155

 Score =  216 bits (552), Expect = 7e-55,   Method: Composition-based stats.
 Identities = 60/148 (40%), Positives = 85/148 (57%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           ++   FM  AL+EA+ A + +EIP+G V V N +II R  N   EL+    HAE++AI  
Sbjct: 6   EEKEFFMREALKEAEIALVNDEIPIGCVIVKNGEIIGRGHNAREELQRAVMHAEVMAIEK 65

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
             +      L +  L+VT+EPC MC+ AI LARI ++ YGA NPK G   +     T   
Sbjct: 66  ANQHEHSWRLLDTTLFVTIEPCVMCSGAIGLARIPQVIYGAKNPKFGAAGSLYDILTDER 125

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H  E+  GI E    Q++QDFF++RR
Sbjct: 126 LNHRVELETGILEVECAQMMQDFFRKRR 153


>gi|269468375|gb|EEZ80040.1| cytosine/adenosine deaminase [uncultured SUP05 cluster bacterium]
          Length = 156

 Score =  216 bits (552), Expect = 7e-55,   Method: Composition-based stats.
 Identities = 58/146 (39%), Positives = 82/146 (56%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
              +M  ALE+A+ A  +NE+PVGA+ V N+++I+ A N+     D TAHAEI  +R+  
Sbjct: 8   DEKWMKIALEQARFAQAKNEVPVGAILVKNDQLIASAHNQPISNNDPTAHAEIQLLRVAG 67

Query: 64  RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123
           + L+   LP   LYVTLEPCTMC  A+  AR+ R+ +GA + K G   +     T    +
Sbjct: 68  KRLNNYRLPNTTLYVTLEPCTMCLGAMIHARVSRVVFGAYDKKTGVCGSCQDLVTSKCFN 127

Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149
           H  +   GI E     +I  FFK RR
Sbjct: 128 HQLQAQGGILESECSSLISQFFKNRR 153


>gi|257783881|ref|YP_003179098.1| CMP/dCMP deaminase zinc-binding [Atopobium parvulum DSM 20469]
 gi|257472388|gb|ACV50507.1| CMP/dCMP deaminase zinc-binding [Atopobium parvulum DSM 20469]
          Length = 166

 Score =  216 bits (552), Expect = 7e-55,   Method: Composition-based stats.
 Identities = 53/146 (36%), Positives = 80/146 (54%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
              +M  ALE+A+ AA   E+P+GAV V   ++++ A NR     D +AHAE LA++   
Sbjct: 16  DQKYMKLALEQAELAAQIGEVPIGAVVVCGGEVVAVAHNRREIDNDPSAHAEFLAMQKAS 75

Query: 64  RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123
           + L +  L    +YVTLEPC MCA  +  ARI R  +GA +PKGG         + +  +
Sbjct: 76  KKLGRWRLSGCTVYVTLEPCLMCAGLMVNARIDRCVFGAFDPKGGATGTLFDVSSDSRLN 135

Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149
           H   +  G+  + +   ++ FFKERR
Sbjct: 136 HEFAVLGGVLAEEASAQLKAFFKERR 161


>gi|302672151|ref|YP_003832111.1| CMP/dCMP deaminase zinc-binding domain-containing protein
           [Butyrivibrio proteoclasticus B316]
 gi|302396624|gb|ADL35529.1| CMP/dCMP deaminase zinc-binding domain-containing protein
           [Butyrivibrio proteoclasticus B316]
          Length = 190

 Score =  216 bits (552), Expect = 7e-55,   Method: Composition-based stats.
 Identities = 52/147 (35%), Positives = 75/147 (51%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
           +   FM  A+ +A+ A +  E+P+G V V   KII R  NR    K   AHAEI AI+  
Sbjct: 26  QDIKFMKAAITQARKAYVLGEVPIGCVIVYEGKIIGRGYNRRNTDKTTLAHAEITAIKRA 85

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
            +++    L    LYVTLEPC MCA AI  ARI  +   A NPK G   +          
Sbjct: 86  GKVIGDWRLEGCKLYVTLEPCQMCAGAIVQARIPEVIMAAENPKAGCAGSVLDILNNPGF 145

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H  ++  G+ +    +++++FF E R
Sbjct: 146 NHQVQVKRGVLKDECAKMLKEFFVELR 172


>gi|322391142|ref|ZP_08064614.1| tRNA-specific adenosine deaminase [Streptococcus peroris ATCC
           700780]
 gi|321145895|gb|EFX41284.1| tRNA-specific adenosine deaminase [Streptococcus peroris ATCC
           700780]
          Length = 166

 Score =  216 bits (552), Expect = 8e-55,   Method: Composition-based stats.
 Identities = 58/149 (38%), Positives = 80/149 (53%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +++   FM  AL+EA+ A   +EIP+G V V + KII R  N   EL+    HAEI+AI 
Sbjct: 16  LEEKEAFMREALKEAEIALEHDEIPIGCVIVKDGKIIGRGHNAREELQRAVMHAEIMAIE 75

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
                     L +  L+VT+EPC MC+ AI LARI  + YGA N K G   +     T  
Sbjct: 76  DANLSEESWRLLDCTLFVTIEPCVMCSGAIGLARIPNVVYGAKNQKFGAAGSLYDILTDE 135

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  ++  G+ E     I+QDFF+ RR
Sbjct: 136 RLNHRVDVETGVLESECAAIMQDFFRNRR 164


>gi|114330609|ref|YP_746831.1| CMP/dCMP deaminase, zinc-binding [Nitrosomonas eutropha C91]
 gi|114307623|gb|ABI58866.1| tRNA-adenosine deaminase [Nitrosomonas eutropha C91]
          Length = 167

 Score =  216 bits (552), Expect = 8e-55,   Method: Composition-based stats.
 Identities = 56/147 (38%), Positives = 76/147 (51%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
           +   FM  AL+ A+ A    E+PVGAV V N++I     N    L D TAHAEI+A+R  
Sbjct: 13  EDEYFMRQALDLARVAGDSGEVPVGAVVVRNSQIAGYGYNCPVTLMDPTAHAEIMALRDA 72

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
              L    LPE  LYVTLEPC MC  ++  ARI+RL Y A +PK G   +          
Sbjct: 73  ANKLGNYRLPECTLYVTLEPCVMCIGSMFHARIKRLVYAAEDPKTGVCGSLLDLPADTRL 132

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H   +  G+    +  +++ FF  RR
Sbjct: 133 NHHLVVSQGVLADEASTLLKQFFIIRR 159


>gi|306845521|ref|ZP_07478090.1| cytidine and deoxycytidylate deaminase family protein [Brucella sp.
           BO1]
 gi|306273842|gb|EFM55669.1| cytidine and deoxycytidylate deaminase family protein [Brucella sp.
           BO1]
          Length = 157

 Score =  216 bits (552), Expect = 8e-55,   Method: Composition-based stats.
 Identities = 93/142 (65%), Positives = 110/142 (77%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  ALEEA  A  R E+P+GAV V + +II+RAGNR RE  DVTAHAEIL IR    +L 
Sbjct: 16  MDIALEEAHAAGERGEVPIGAVIVRDGEIIARAGNRTREFNDVTAHAEILTIRQAGEVLG 75

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
            E L + DLYVTLEPC MCAAAIS ARIRRLYYGAS+PKGGGIE+G +FYT  TCHH+PE
Sbjct: 76  SERLIDCDLYVTLEPCAMCAAAISFARIRRLYYGASDPKGGGIEHGGRFYTQPTCHHAPE 135

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
           IYPG  E  +R+I++DFF+E+R
Sbjct: 136 IYPGFCEADARKILRDFFREKR 157


>gi|290890962|ref|ZP_06554026.1| hypothetical protein AWRIB429_1416 [Oenococcus oeni AWRIB429]
 gi|290479361|gb|EFD88021.1| hypothetical protein AWRIB429_1416 [Oenococcus oeni AWRIB429]
          Length = 156

 Score =  216 bits (551), Expect = 8e-55,   Method: Composition-based stats.
 Identities = 58/145 (40%), Positives = 86/145 (59%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
             FM  AL++AQ A    E+P+GAV V +N++I+   NR  +    TAHAE L I    R
Sbjct: 9   EEFMQLALKQAQTAFDEGEVPIGAVLVKDNQVIAADHNRKEQSGIATAHAEKLVIEGANR 68

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
            L    L +  L+VT+EPC MC  AI  +RI RL+YGA++PK GG+ +       +  +H
Sbjct: 69  SLGDWRLNDCSLFVTIEPCVMCCGAIIQSRIPRLFYGAADPKFGGVSSLYHLLEDSRSNH 128

Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149
             E+YP +  ++S  ++QDFF++ R
Sbjct: 129 FVEVYPDVLAKQSANLMQDFFRKLR 153


>gi|332994184|gb|AEF04239.1| cytidine/deoxycytidylate deaminase family protein [Alteromonas sp.
           SN2]
          Length = 180

 Score =  216 bits (551), Expect = 9e-55,   Method: Composition-based stats.
 Identities = 54/149 (36%), Positives = 74/149 (49%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M K   +M  AL  A  A    E+PVGA  V N ++I    N      D +AHAE+ A+R
Sbjct: 11  MVKHTKWMQHALSLADKAEAMGEVPVGACVVHNGELIGEGWNTPITDSDPSAHAEMNAVR 70

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
           M  + L      +  LYVTLEPC+MCA  +  ARI+R+ YGAS+ K G   +        
Sbjct: 71  MAAKHLQNYRTTDATLYVTLEPCSMCAGMLVHARIKRVVYGASDAKTGAAGSEMNILNHP 130

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
           + +H  ++  G+        I  FFK RR
Sbjct: 131 SLNHQVDVISGVLADDCADKISAFFKRRR 159


>gi|293364574|ref|ZP_06611295.1| tRNA-specific adenosine deaminase [Streptococcus oralis ATCC 35037]
 gi|307702826|ref|ZP_07639774.1| tRNA-specific adenosine deaminase [Streptococcus oralis ATCC 35037]
 gi|291316832|gb|EFE57264.1| tRNA-specific adenosine deaminase [Streptococcus oralis ATCC 35037]
 gi|307623506|gb|EFO02495.1| tRNA-specific adenosine deaminase [Streptococcus oralis ATCC 35037]
          Length = 155

 Score =  216 bits (551), Expect = 9e-55,   Method: Composition-based stats.
 Identities = 59/148 (39%), Positives = 78/148 (52%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           ++   FM  AL EA+ A   +EIP+G V V + +II R  N   EL+    HAEI+AI  
Sbjct: 6   EEKEAFMREALREAEIALEHDEIPIGCVIVKDGEIIGRGHNAREELQRAVMHAEIMAIEN 65

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
                    L +  L+VT+EPC MC+ AI LARI  + YGA N K G   +     T   
Sbjct: 66  ANVSEESWRLLDCTLFVTIEPCVMCSGAIGLARIPNVVYGAKNQKFGAAGSLYDILTDER 125

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H  E+  GI E     I+QDFF+ RR
Sbjct: 126 LNHRVEVETGILEDDCAAIMQDFFRNRR 153


>gi|90962204|ref|YP_536120.1| cytosine/adenosine deaminase [Lactobacillus salivarius UCC118]
 gi|301300462|ref|ZP_07206662.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Lactobacillus salivarius ACS-116-V-Col5a]
 gi|90821398|gb|ABE00037.1| Cytosine/adenosine deaminase [Lactobacillus salivarius UCC118]
 gi|300851959|gb|EFK79643.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Lactobacillus salivarius ACS-116-V-Col5a]
          Length = 166

 Score =  216 bits (551), Expect = 9e-55,   Method: Composition-based stats.
 Identities = 55/140 (39%), Positives = 76/140 (54%)

Query: 6   VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
            FM  AL EA+ AA   E+P+G V V + KII R  N     ++ T HAE+LAI      
Sbjct: 10  KFMKEALFEAKLAAKIGEVPIGCVIVKDGKIIGRGHNLREHSQNATLHAEMLAIEEANET 69

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           ++   L +  L+VTLEPC MC+ AI  +RI  +YYGAS+PK G +         +  +H 
Sbjct: 70  VNSWRLVDTQLFVTLEPCPMCSGAIINSRIPEVYYGASDPKAGTVGTLMNLLEDSRFNHQ 129

Query: 126 PEIYPGISEQRSRQIIQDFF 145
             +  GI E     I++DFF
Sbjct: 130 SFVEKGILENECASILKDFF 149


>gi|217972561|ref|YP_002357312.1| zinc-binding CMP/dCMP deaminase [Shewanella baltica OS223]
 gi|217497696|gb|ACK45889.1| CMP/dCMP deaminase zinc-binding [Shewanella baltica OS223]
          Length = 175

 Score =  216 bits (551), Expect = 9e-55,   Method: Composition-based stats.
 Identities = 51/146 (34%), Positives = 73/146 (50%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
              +M  A+  A+NA    E+PVGAV V + + I+   N +    D +AHAEIL +R   
Sbjct: 13  DEHWMQVAMLMAENAEAEGEVPVGAVLVKDGQQIATGYNLSISQHDPSAHAEILCLREAG 72

Query: 64  RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123
           R++    L +  LYVTLEPC MCA A+  +RI R+ +GA + K G              +
Sbjct: 73  RLVENYRLLDATLYVTLEPCAMCAGAMVHSRIARVVFGARDEKTGAAGTVVNLLQHPAFN 132

Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149
           H  E+  G+        +  FFK RR
Sbjct: 133 HQVEVTSGVLADACSAQLSRFFKRRR 158


>gi|257871097|ref|ZP_05650750.1| cytidine/deoxycytidylate deaminase [Enterococcus gallinarum EG2]
 gi|257805261|gb|EEV34083.1| cytidine/deoxycytidylate deaminase [Enterococcus gallinarum EG2]
          Length = 173

 Score =  216 bits (551), Expect = 9e-55,   Method: Composition-based stats.
 Identities = 57/148 (38%), Positives = 85/148 (57%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
            +   FM  AL+EAQ A    E+P+GAV VL  +II R  N   + ++ TAHAE+ AI+ 
Sbjct: 15  SEKEYFMREALKEAQKAEAIAEVPIGAVVVLEGQIIGRGHNLREKQQEATAHAEMFAIQQ 74

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
            C+ +    L +  L+VTLEPC MC+ A+ LAR+  +Y+GA +PKGG   +         
Sbjct: 75  ACQAIESWRLEQAQLFVTLEPCPMCSGAMMLARVEEVYFGAYDPKGGAAGSLLNLLEDER 134

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H   +  GI E+   Q+++DFF+  R
Sbjct: 135 FNHWSYVEGGILEEACGQVLKDFFRALR 162


>gi|170718532|ref|YP_001783741.1| CMP/dCMP deaminase zinc-binding [Haemophilus somnus 2336]
 gi|168826661|gb|ACA32032.1| CMP/dCMP deaminase zinc-binding [Haemophilus somnus 2336]
          Length = 166

 Score =  216 bits (551), Expect = 9e-55,   Method: Composition-based stats.
 Identities = 59/147 (40%), Positives = 78/147 (53%), Gaps = 1/147 (0%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
               M  AL  A  A    EIPVGAV V     I++   N +    D TAHAEI+A+R  
Sbjct: 6   DEKMMRYALSLADKAEALGEIPVGAVLVDKQGDILAEGWNLSIIHNDPTAHAEIIALRQA 65

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
            + L    L +  LYVTLEPCTMCA AI  +RI RL +GA + K G + +   F+     
Sbjct: 66  GQKLQNYRLLDTTLYVTLEPCTMCAGAILHSRIGRLVFGAYDYKTGAVGSRFHFFNDYKM 125

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H  EI  G+ ++   Q I  FF++RR
Sbjct: 126 NHMLEITGGVLQEECSQKISTFFQKRR 152


>gi|327182903|gb|AEA31350.1| cytidine-deoxycytidylate deaminase [Lactobacillus amylovorus GRL
           1118]
          Length = 168

 Score =  216 bits (551), Expect = 9e-55,   Method: Composition-based stats.
 Identities = 54/149 (36%), Positives = 84/149 (56%), Gaps = 1/149 (0%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIR 60
                +M  A+ +A+ A  + E+P+GAV V  + K+I    NR    KD T HAE++AI+
Sbjct: 5   DDKQKYMQLAIAQAKEAEKQGEVPIGAVIVDPDGKVIGTGYNRRELDKDATQHAEMIAIK 64

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
             C+ L    L +  L+VTLEPC MCA AI  +RI+ +Y+GA +PK G   +    +T+ 
Sbjct: 65  EACKNLGMWRLIDCSLFVTLEPCPMCAGAIINSRIKDVYFGALDPKAGACGSVVDLFTVE 124

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H P    G+   +  Q+++DFF+  R
Sbjct: 125 KFNHHPHAIRGLYRDQCAQMLKDFFRAIR 153


>gi|29840517|ref|NP_829623.1| cytidine/deoxycytidylate deaminase family protein [Chlamydophila
           caviae GPIC]
 gi|29834866|gb|AAP05501.1| cytidine/deoxycytidylate deaminase family protein [Chlamydophila
           caviae GPIC]
          Length = 157

 Score =  216 bits (551), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 62/149 (41%), Positives = 88/149 (59%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           ++K   FM+ AL+EA+ A  ++E+PVG V V +NKII+R  N   + +D TAHAEIL I 
Sbjct: 3   IEKDIFFMNQALKEARQAYDQDEVPVGCVIVKDNKIIARGHNTTEKFQDPTAHAEILCIG 62

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              + L    L +  LY TLEPC MCA AI LARIRR+ + A + + G   +    +T  
Sbjct: 63  AAAQYLENWRLVDTVLYCTLEPCLMCAGAIQLARIRRIVWAAPDLRLGAGGSWINVFTAK 122

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
              H  E + GI  + S Q+++ FF E+R
Sbjct: 123 HPFHQVECFSGICREESEQLMKQFFIEKR 151


>gi|261212078|ref|ZP_05926364.1| tRNA-specific adenosine-34 deaminase [Vibrio sp. RC341]
 gi|260838686|gb|EEX65337.1| tRNA-specific adenosine-34 deaminase [Vibrio sp. RC341]
          Length = 170

 Score =  216 bits (551), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 54/147 (36%), Positives = 79/147 (53%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
           +   FM  A+  A  A  + E+PVGAV V + +II+   N +    D TAHAEI  IR  
Sbjct: 9   QDEQFMRRAITLAAQAEAQGEVPVGAVLVRDGEIIAEGWNCSITHHDATAHAEIEVIRKA 68

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
             +L+   L +  LYVTLEPC MCA A+  +R++R+ YGA + K G        ++    
Sbjct: 69  GNVLNNYRLLDTTLYVTLEPCPMCAGALLHSRVKRIVYGAPDLKAGAAGTVMDLFSSQAA 128

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H   +  G+ E+  R  +Q FF+ RR
Sbjct: 129 YHYATVEKGLLEEECRTQLQAFFQRRR 155


>gi|251791894|ref|YP_003006614.1| tRNA-specific adenosine deaminase [Aggregatibacter aphrophilus
           NJ8700]
 gi|247533281|gb|ACS96527.1| tRNA-specific adenosine deaminase [Aggregatibacter aphrophilus
           NJ8700]
          Length = 174

 Score =  216 bits (551), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 61/147 (41%), Positives = 81/147 (55%), Gaps = 1/147 (0%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
              FM  AL  A  A    EIPVGAV V    +II    N +    D TAHAEI+A+R G
Sbjct: 9   DEKFMRHALMLADKAEALGEIPVGAVLVSAEGEIIGEGWNLSIIDSDPTAHAEIVALRQG 68

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
            + L    L    LYVTLEPCTMCA AI  +RI+RL +GA++ K G + +   F+     
Sbjct: 69  GQRLQNYRLLNATLYVTLEPCTMCAGAILHSRIKRLVFGAADYKTGAVGSRFHFFDDYKM 128

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H  EI  G+ +Q   + +  FF++RR
Sbjct: 129 NHVVEITGGVLQQECSEKLSAFFQKRR 155


>gi|262190740|ref|ZP_06048969.1| tRNA-specific adenosine-34 deaminase [Vibrio cholerae CT 5369-93]
 gi|262033384|gb|EEY51893.1| tRNA-specific adenosine-34 deaminase [Vibrio cholerae CT 5369-93]
          Length = 175

 Score =  216 bits (551), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 55/147 (37%), Positives = 79/147 (53%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
           +   FM  A+  A  A  + E+PVGAV V + +II+   N +    D TAHAEI  IR  
Sbjct: 9   QDEQFMRRAIVLAAQAEAQGEVPVGAVLVRDGEIIAEGWNGSITNHDATAHAEIEVIRKA 68

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
            + LS   L +  LYVTLEPC MCA A+  +R++R+ YGA + K G        ++    
Sbjct: 69  GKALSNYRLLDTTLYVTLEPCPMCAGALLHSRVKRIVYGAPDLKAGAAGTVMDLFSSQAA 128

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H   +  G+ E+  R  +Q FF+ RR
Sbjct: 129 YHYATVEKGLLEEECRAQLQAFFQRRR 155


>gi|77361256|ref|YP_340831.1| tRNA-specific adenosine deaminase [Pseudoalteromonas haloplanktis
           TAC125]
 gi|76876167|emb|CAI87389.1| tRNA-specific adenosine deaminase [Pseudoalteromonas haloplanktis
           TAC125]
          Length = 168

 Score =  216 bits (551), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 56/147 (38%), Positives = 85/147 (57%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
             N +M  AL  A+ A   +EIPVGA+ V +N++++   NR+    D +AHAE++A+R G
Sbjct: 6   DDNYWMQQALTYAKQAEQLDEIPVGAILVKDNQLVAAGYNRSITDNDPSAHAEMMAVRKG 65

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
            + L+   L +  LYVTLEPC+MCA  +  +RI+RL +GA++ K G   +          
Sbjct: 66  GKALNNYRLIDCTLYVTLEPCSMCAGLLVHSRIKRLVFGAADAKTGSAGSIMNLLQEPKL 125

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H  E+  G+ E +   II  FFK RR
Sbjct: 126 NHQVEVLGGVLEGQCATIISGFFKRRR 152


>gi|295425582|ref|ZP_06818269.1| cytidine/deoxycytidylate deaminase [Lactobacillus amylolyticus DSM
           11664]
 gi|295064598|gb|EFG55519.1| cytidine/deoxycytidylate deaminase [Lactobacillus amylolyticus DSM
           11664]
          Length = 166

 Score =  216 bits (551), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 52/145 (35%), Positives = 87/145 (60%), Gaps = 1/145 (0%)

Query: 6   VFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
            +M  A+ EA+ A  ++E+P+GA+ V  + +++ +  NR    +D T HAE++AIR  C+
Sbjct: 9   KYMQLAIIEAKKAERQDEVPIGAIVVAPDGQVVGKGYNRRELDQDATQHAEMIAIREACK 68

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
            +    L +  L+VTLEPC MCA AI  ARI+ +Y+GA +PK G   +    +T+   +H
Sbjct: 69  NIGFWRLIDCSLFVTLEPCPMCAGAIINARIKDVYFGAMDPKAGAAGSVVDLFTVEKFNH 128

Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149
            P++  G+ +    Q++ DFF+  R
Sbjct: 129 HPQVIRGLYQDECSQMLTDFFRAIR 153


>gi|239630121|ref|ZP_04673152.1| tRNA-adenosine deaminase [Lactobacillus paracasei subsp. paracasei
           8700:2]
 gi|301067271|ref|YP_003789294.1| cytosine/adenosine deaminase [Lactobacillus casei str. Zhang]
 gi|239527733|gb|EEQ66734.1| tRNA-adenosine deaminase [Lactobacillus paracasei subsp. paracasei
           8700:2]
 gi|300439678|gb|ADK19444.1| Cytosine/adenosine deaminase [Lactobacillus casei str. Zhang]
          Length = 168

 Score =  216 bits (551), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 57/148 (38%), Positives = 78/148 (52%), Gaps = 2/148 (1%)

Query: 1   MKKG--NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           M +   N FM  AL EA+ AA   E+P+GAV V   +II R  N     +D T HAE+LA
Sbjct: 1   MDEHDINQFMDAALTEAKKAAAIGEVPIGAVIVHQGEIIGRGYNLRETTQDATHHAEMLA 60

Query: 59  IRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
           I+  C+ L    L +  L+VTLEPC MCA A+  AR+   Y+GA++PK G          
Sbjct: 61  IQAACKTLGTWRLEDCSLFVTLEPCPMCAGAMINARVATCYFGATDPKAGVAGTFYNLLA 120

Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFK 146
               +H   +  GI    S  ++Q FF+
Sbjct: 121 DTRFNHQVVVVSGIKADESATLLQTFFR 148


>gi|163844392|ref|YP_001622047.1| hypothetical protein BSUIS_B0208 [Brucella suis ATCC 23445]
 gi|163675115|gb|ABY39225.1| Hypothetical protein, conserved [Brucella suis ATCC 23445]
          Length = 157

 Score =  216 bits (551), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 92/142 (64%), Positives = 110/142 (77%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  ALEEA  A  R E+P+GA+ V + +II+RAGNR RE  DVTAHAEIL IR    +L 
Sbjct: 16  MDIALEEAHAAGERGEVPIGAIIVRDGEIIARAGNRTREFNDVTAHAEILTIRQAGEMLG 75

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
            E L + DLYVTLEPC MCAAAIS ARIRRLYYGAS+PKGGGIE+G +FYT  TCHH+PE
Sbjct: 76  SERLIDCDLYVTLEPCAMCAAAISFARIRRLYYGASDPKGGGIEHGGRFYTQPTCHHTPE 135

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
           IYPG  E  +R+I++DFF+E+R
Sbjct: 136 IYPGFCEADARKILKDFFREKR 157


>gi|258517370|ref|YP_003193592.1| CMP/dCMP deaminase zinc-binding [Desulfotomaculum acetoxidans DSM
           771]
 gi|257781075|gb|ACV64969.1| CMP/dCMP deaminase zinc-binding [Desulfotomaculum acetoxidans DSM
           771]
          Length = 160

 Score =  216 bits (551), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 62/146 (42%), Positives = 85/146 (58%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
              FM  ALEEA  A L+ E+P+GAVAVL  ++I R  N    L D TAHAE+LA+R   
Sbjct: 2   HTGFMRIALEEANKAYLKGEVPIGAVAVLGRQVIGRGHNLRESLNDSTAHAEMLALREAA 61

Query: 64  RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123
           R +    L EV LY T+EPC MC+ A+   R++ L YGA + K G +++G      A  +
Sbjct: 62  RFIGDWRLNEVILYSTIEPCAMCSGALVQFRVKLLVYGAPDVKFGAVDSGLDIVRQARFN 121

Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149
           H  E+  G+     R+I+Q FF+E R
Sbjct: 122 HRVEVVSGVLADECREIMQRFFRELR 147


>gi|322388496|ref|ZP_08062098.1| tRNA-specific adenosine deaminase [Streptococcus infantis ATCC
           700779]
 gi|321140614|gb|EFX36117.1| tRNA-specific adenosine deaminase [Streptococcus infantis ATCC
           700779]
          Length = 166

 Score =  215 bits (550), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 57/149 (38%), Positives = 81/149 (54%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +++   FM  AL+EA+ A   +EIP+G V V + K+I R  N   EL+    HAEI+AI 
Sbjct: 16  LEEKEAFMREALKEAEIALEHDEIPIGCVIVKDGKVIGRGHNAREELQRAVMHAEIMAIE 75

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
                     L +  L+VT+EPC MC+ AI LARI  + YGA N K G   +     T  
Sbjct: 76  NANLSEESWRLLDCTLFVTIEPCVMCSGAIGLARIPNVIYGAKNQKFGAAGSLYDILTDE 135

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  ++  G+ E    +I+QDFF+ RR
Sbjct: 136 RLNHRVDVETGVLENECAEIMQDFFRNRR 164


>gi|301169624|emb|CBW29225.1| tRNA-specific adenosine deaminase [Haemophilus influenzae 10810]
          Length = 173

 Score =  215 bits (550), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 62/147 (42%), Positives = 81/147 (55%), Gaps = 1/147 (0%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMG 62
               M  ALE A  A    EIPVGAV V +   II    N +    D TAHAEI+A+R G
Sbjct: 11  DEKMMRYALELADKAEALGEIPVGAVLVDDAGNIIGEGWNLSIVQSDPTAHAEIIALRNG 70

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
            + +    L    LYVTLEPCTMCA AI  +RI+RL +GAS+ K G I +   F+     
Sbjct: 71  AKNIQNYRLLNSTLYVTLEPCTMCAGAILHSRIKRLVFGASDYKTGAIGSRFHFFDDYKM 130

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H+ EI  G+  +   Q +  FF++RR
Sbjct: 131 NHTLEITSGVLAEECSQKLSTFFQKRR 157


>gi|304410027|ref|ZP_07391646.1| CMP/dCMP deaminase zinc-binding [Shewanella baltica OS183]
 gi|307302260|ref|ZP_07582018.1| CMP/dCMP deaminase zinc-binding [Shewanella baltica BA175]
 gi|304351436|gb|EFM15835.1| CMP/dCMP deaminase zinc-binding [Shewanella baltica OS183]
 gi|306914298|gb|EFN44719.1| CMP/dCMP deaminase zinc-binding [Shewanella baltica BA175]
          Length = 175

 Score =  215 bits (550), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 52/146 (35%), Positives = 73/146 (50%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
              +M  A+  A+NA    E+PVGAV V + + I+   N +    D +AHAEIL +R   
Sbjct: 13  DEHWMQVAMLMAENAEAEGEVPVGAVLVKDGQQIATGYNLSISQHDPSAHAEILCLREAG 72

Query: 64  RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123
           R++    L +  LYVTLEPC MCA A+  +RI R+ +GA + K G              +
Sbjct: 73  RLVENYRLLDATLYVTLEPCAMCAGAMVHSRIARVVFGARDEKTGAAGTVVNLLQHPAFN 132

Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149
           H  E+  GI        +  FFK RR
Sbjct: 133 HQVEVTSGILADACSAQLSRFFKRRR 158


>gi|15888031|ref|NP_353712.1| cytidine and deoxycytidylate deaminase [Agrobacterium tumefaciens
           str. C58]
 gi|15155649|gb|AAK86497.1| cytidine and deoxycytidylate deaminase [Agrobacterium tumefaciens
           str. C58]
          Length = 152

 Score =  215 bits (550), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 89/149 (59%), Positives = 116/149 (77%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M +   FM  AL EA++A  R+E+P+GAV VL+ ++I+R+GNR REL DVTAHAEI  IR
Sbjct: 1   MAERTHFMELALVEARSAGERDEVPIGAVLVLDGRVIARSGNRTRELNDVTAHAEIAVIR 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
           M C  L QE LP  DLYVTLEPCTMCAAAIS ARIRRLYYGA +PKGG +E+G +F++  
Sbjct: 61  MACEALGQERLPGADLYVTLEPCTMCAAAISFARIRRLYYGAQDPKGGAVESGVRFFSQP 120

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
           TCHH+P++Y G++E  S +I++ FF+E+R
Sbjct: 121 TCHHAPDVYSGLAESESAEILRQFFREKR 149


>gi|224101625|ref|XP_002312358.1| predicted protein [Populus trichocarpa]
 gi|222852178|gb|EEE89725.1| predicted protein [Populus trichocarpa]
          Length = 1364

 Score =  215 bits (550), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 64/165 (38%), Positives = 82/165 (49%), Gaps = 17/165 (10%)

Query: 2    KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
            K   +FM  AL EA+ AA   E+PVGAV V + +II+R  N   EL+D TAHAE++ IR 
Sbjct: 1161 KTDEMFMREALLEAKKAADSWEVPVGAVLVHHGRIIARGHNLVEELRDSTAHAEMICIRE 1220

Query: 62   GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
                L    L E  LY+TLEPC MCA AI  ARI+ L +GA N   G   +  + +  A 
Sbjct: 1221 ASNKLRTWRLSETTLYITLEPCPMCAGAILQARIKTLVWGAPNKLLGADGSWIRLFPDAG 1280

Query: 122  -----------------CHHSPEIYPGISEQRSRQIIQDFFKERR 149
                              H    I  GI E     ++Q FF+ RR
Sbjct: 1281 EENGSELSNKPAAPVHPFHRKMTIRRGILESECADVMQQFFQLRR 1325


>gi|238926792|ref|ZP_04658552.1| deaminase [Selenomonas flueggei ATCC 43531]
 gi|238885324|gb|EEQ48962.1| deaminase [Selenomonas flueggei ATCC 43531]
          Length = 152

 Score =  215 bits (550), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 57/150 (38%), Positives = 87/150 (58%), Gaps = 1/150 (0%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAI 59
           M      M  ALEEA+ A L  E+P+GAV + +   +IS   N      D TAHAE++AI
Sbjct: 1   MPDDLHGMRLALEEAKRAYLCGEVPIGAVILDDAGSVISSGYNLRETEHDATAHAELIAI 60

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
           R  C+ L +  L  + LYVT+EPC MCA AI ++RI R+ YG+++ K G  E+       
Sbjct: 61  RRACKALGRWRLTGLTLYVTIEPCPMCAGAIVMSRISRVVYGSADSKAGACESLFNITGC 120

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
           +  +H P++  G+  +    ++++FF+ERR
Sbjct: 121 SGLNHQPDVCAGVLAEECAALLRNFFQERR 150


>gi|227513704|ref|ZP_03943753.1| possible guanine deaminase [Lactobacillus buchneri ATCC 11577]
 gi|227522506|ref|ZP_03952555.1| possible guanine deaminase [Lactobacillus hilgardii ATCC 8290]
 gi|227083023|gb|EEI18335.1| possible guanine deaminase [Lactobacillus buchneri ATCC 11577]
 gi|227090328|gb|EEI25640.1| possible guanine deaminase [Lactobacillus hilgardii ATCC 8290]
          Length = 157

 Score =  215 bits (550), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 58/144 (40%), Positives = 83/144 (57%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
            K   FM  AL EAQ A L  E+P+GAV   + +II R  N    L D  AHAEI+AI  
Sbjct: 4   NKDERFMKMALIEAQKAYLIGEVPIGAVITQDGQIIGRGHNLREHLNDGVAHAEIMAIEE 63

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
            CR L    L + +LYVT+EPC MC+ AI  +RI R+ +GA + K G + +  +    + 
Sbjct: 64  ACRYLRSWRLVDCELYVTIEPCLMCSGAIVNSRIDRVVFGARDKKAGAVRSLYRVLEDSR 123

Query: 122 CHHSPEIYPGISEQRSRQIIQDFF 145
            +H+ E++ G+ +    +II+DFF
Sbjct: 124 LNHNVEVFEGVLQPACSKIIKDFF 147


>gi|116495716|ref|YP_807450.1| cytosine/adenosine deaminase [Lactobacillus casei ATCC 334]
 gi|116105866|gb|ABJ71008.1| tRNA-adenosine deaminase [Lactobacillus casei ATCC 334]
          Length = 168

 Score =  215 bits (550), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 57/148 (38%), Positives = 78/148 (52%), Gaps = 2/148 (1%)

Query: 1   MKKG--NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           M +   N FM  AL EA+ AA   E+P+GAV V   +II R  N     +D T HAE+LA
Sbjct: 1   MDEHDINQFMDAALTEAKKAAAIGEVPIGAVIVHQGEIIGRGYNLRETTQDATYHAEMLA 60

Query: 59  IRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
           I+  C+ L    L +  L+VTLEPC MCA A+  AR+   Y+GA++PK G          
Sbjct: 61  IQAACKTLGTWRLEDCSLFVTLEPCPMCAGAMINARVATCYFGATDPKAGVAGTFYNLLA 120

Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFK 146
               +H   +  GI    S  ++Q FF+
Sbjct: 121 DTRFNHQVAVVSGIKADESATLLQTFFR 148


>gi|225867781|ref|YP_002743729.1| deaminase [Streptococcus equi subsp. zooepidemicus]
 gi|225701057|emb|CAW97859.1| putative deaminase [Streptococcus equi subsp. zooepidemicus]
          Length = 164

 Score =  215 bits (550), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 56/148 (37%), Positives = 80/148 (54%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           ++   FM  AL+EA+ + L++EIP+G V V    II R  N   E      HAEI+AI  
Sbjct: 6   QEQEYFMREALKEAEKSLLKDEIPIGCVIVKAGHIIGRGHNAREERNQAIMHAEIMAINE 65

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
                    L +  L+VT+EPC MC+ AI LARI  + YGASN K GG  +  Q  T   
Sbjct: 66  ANAHEGNWRLLDTTLFVTIEPCVMCSGAIGLARIPHVVYGASNQKFGGAGSLYQILTDKR 125

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H  ++  G+      +++Q FF++RR
Sbjct: 126 LNHRVQLEVGLLADDCAKLMQTFFRQRR 153


>gi|119468555|ref|ZP_01611646.1| tRNA-specific adenosine deaminase [Alteromonadales bacterium TW-7]
 gi|119448063|gb|EAW29328.1| tRNA-specific adenosine deaminase [Alteromonadales bacterium TW-7]
          Length = 165

 Score =  215 bits (549), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 55/147 (37%), Positives = 81/147 (55%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
               +M  AL  A+ A   NEIPVGAV V +N++I+   NR+    D +AHAE++A+R  
Sbjct: 6   DNAYWMEQALLYAKQAEQLNEIPVGAVLVKDNQLIASGYNRSITDNDPSAHAEMIAVREA 65

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
            + L+   L +  LYVTLEPC+MCA  +  +RI+RL +GA + K G   +          
Sbjct: 66  GKALNNYRLIDCTLYVTLEPCSMCAGLLVHSRIKRLVFGAPDAKTGSAGSIMNLLQEPRL 125

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H  E+  G+   +    I +FFK RR
Sbjct: 126 NHQVEVVGGVLADKCGNTISEFFKRRR 152


>gi|257464722|ref|ZP_05629093.1| tRNA-adenosine deaminase [Actinobacillus minor 202]
 gi|257450382|gb|EEV24425.1| tRNA-adenosine deaminase [Actinobacillus minor 202]
          Length = 150

 Score =  215 bits (549), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 64/143 (44%), Positives = 78/143 (54%), Gaps = 1/143 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  AL  A  A    EIPVGAV V  + KI+    NR+  L D TAHAEI AIRM  + L
Sbjct: 1   MQYALSLADKAEQEGEIPVGAVLVDKSGKIVGEGWNRSIILSDPTAHAEIQAIRMAGQHL 60

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  LYVTLEPC MCA AI  +RI RL +GAS+ K G I +    +     +H  
Sbjct: 61  QNYRLLDTTLYVTLEPCPMCAGAILHSRIGRLVFGASDYKTGAIGSRFHLFEDYKMNHFL 120

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           +I  G+      Q I  FFK+RR
Sbjct: 121 QIRGGVMRDECSQKISAFFKKRR 143


>gi|315612142|ref|ZP_07887058.1| tRNA-specific adenosine deaminase [Streptococcus sanguinis ATCC
           49296]
 gi|315315805|gb|EFU63841.1| tRNA-specific adenosine deaminase [Streptococcus sanguinis ATCC
           49296]
          Length = 155

 Score =  215 bits (549), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 59/148 (39%), Positives = 78/148 (52%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           ++   FM  AL EA+ A   +EIP+G V V + +II R  N   EL+    HAEI+AI  
Sbjct: 6   EEKEAFMREALREAEIALEHDEIPIGCVIVKDGEIIGRGHNAREELQRAVMHAEIMAIEN 65

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
                    L    L+VT+EPC MC+ AI LARI ++ YGA N K G   +     T   
Sbjct: 66  ANVSEESWRLLNCTLFVTIEPCVMCSGAIGLARIPKVVYGAKNQKFGAAGSLYDILTDER 125

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H  E+  GI E     I+QDFF+ RR
Sbjct: 126 LNHRVEVETGILEDDCVAIMQDFFRNRR 153


>gi|309782085|ref|ZP_07676815.1| tRNA-specific adenosine deaminase [Ralstonia sp. 5_7_47FAA]
 gi|308919151|gb|EFP64818.1| tRNA-specific adenosine deaminase [Ralstonia sp. 5_7_47FAA]
          Length = 182

 Score =  215 bits (549), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 52/148 (35%), Positives = 79/148 (53%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           ++   +M  AL +A+ A  + E+PVGAV V  N+I+    N      D +AHAE+ A+R 
Sbjct: 17  ERDGYWMQQALVQAKFAWGQGEVPVGAVVVRGNEIVGVGYNAPIGTHDPSAHAEMRALRQ 76

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
               L    LP+ +++VTLEPC MCA A+  AR+ R+ YGA +PK G   +    +    
Sbjct: 77  AAEKLGNYRLPDCEVFVTLEPCVMCAGAMLHARVARVVYGAPDPKTGAAGSILDLFAETR 136

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H   I   +  Q    +++ FF ERR
Sbjct: 137 LNHQTAITGSVLAQECGDMLRAFFAERR 164


>gi|253702219|ref|YP_003023408.1| CMP/dCMP deaminase zinc-binding [Geobacter sp. M21]
 gi|251777069|gb|ACT19650.1| CMP/dCMP deaminase zinc-binding protein [Geobacter sp. M21]
          Length = 166

 Score =  215 bits (549), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 51/148 (34%), Positives = 81/148 (54%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           K  + +M  A+ +A+ A    E+P+GAV V +  +I+R  N     +D  AHAE++AIR 
Sbjct: 3   KDDHYWMGQAIAQARRAEAIGEVPIGAVVVKDGVVIARGHNLRESKQDPAAHAEMIAIRK 62

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
             + L+   L    LYVTLEPCTMC  A+ L+R+ R+ +G+ +PKGG   +         
Sbjct: 63  AAKKLASWRLTGATLYVTLEPCTMCMGAVILSRLERVVFGSYDPKGGAAGSLYDLSDDKR 122

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +HS  + PG+  + +  ++  FF   R
Sbjct: 123 LNHSVILTPGVRGEETSSMLSGFFAGLR 150


>gi|191639204|ref|YP_001988370.1| Putative Cytidine/deoxycytidylate deaminase, zinc-binding region
           YaaJ [Lactobacillus casei BL23]
 gi|227533725|ref|ZP_03963774.1| zinc-binding cytidine/deoxycytidylate deaminase [Lactobacillus
           paracasei subsp. paracasei ATCC 25302]
 gi|190713506|emb|CAQ67512.1| Putative Cytidine/deoxycytidylate deaminase, zinc-binding region
           YaaJ [Lactobacillus casei BL23]
 gi|227188709|gb|EEI68776.1| zinc-binding cytidine/deoxycytidylate deaminase [Lactobacillus
           paracasei subsp. paracasei ATCC 25302]
 gi|327383282|gb|AEA54758.1| Nucleoside deaminase [Lactobacillus casei LC2W]
 gi|327386465|gb|AEA57939.1| Nucleoside deaminase [Lactobacillus casei BD-II]
          Length = 168

 Score =  215 bits (549), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 57/148 (38%), Positives = 78/148 (52%), Gaps = 2/148 (1%)

Query: 1   MKKG--NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           M +   N FM  AL EA+ AA   E+P+GAV V   +II R  N     +D T HAE+LA
Sbjct: 1   MDEHDINQFMDAALTEAKKAAAIGEVPIGAVIVHQGEIIGRGYNLRETTQDATHHAEMLA 60

Query: 59  IRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
           I+  C+ L    L +  L+VTLEPC MCA A+  AR+   Y+GA++PK G          
Sbjct: 61  IQAACKTLGTWRLEDCSLFVTLEPCPMCAGAMINARVATCYFGATDPKAGVAGTFYNLLA 120

Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFK 146
               +H   +  GI    S  ++Q FF+
Sbjct: 121 DTRFNHQVAVVSGIKADESATLLQTFFR 148


>gi|195977341|ref|YP_002122585.1| tRNA-specific adenosine-34 deaminase [Streptococcus equi subsp.
           zooepidemicus MGCS10565]
 gi|195974046|gb|ACG61572.1| tRNA-specific adenosine-34 deaminase [Streptococcus equi subsp.
           zooepidemicus MGCS10565]
          Length = 164

 Score =  215 bits (549), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 55/148 (37%), Positives = 80/148 (54%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           ++   FM  AL+EA+ + L++EIP+G V V    II R  N   E      HAEI+AI  
Sbjct: 6   QEQEYFMREALKEAKKSLLKDEIPIGCVIVKAGHIIGRGHNAREERNQAIMHAEIMAISE 65

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
                    L +  L+VT+EPC MC+ AI LARI  + YGASN K GG  +  Q  T   
Sbjct: 66  ANVHEGNWRLLDTTLFVTIEPCVMCSGAIGLARIPHVVYGASNQKFGGAGSLYQILTDER 125

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H  ++  G+      +++Q FF+++R
Sbjct: 126 LNHRVQLETGLLADDCAKLMQTFFQQKR 153


>gi|23499966|ref|NP_699406.1| cytidine and deoxycytidylate deaminase family protein [Brucella
           suis 1330]
 gi|23463547|gb|AAN33411.1| cytidine and deoxycytidylate deaminase family protein [Brucella
           suis 1330]
          Length = 157

 Score =  215 bits (549), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 93/142 (65%), Positives = 110/142 (77%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  ALEEA  A  R E+P+GAV V + +II+RAGNR RE  DVTAHAEIL IR    +L 
Sbjct: 16  MDIALEEAHAAGERGEVPIGAVIVRDGEIIARAGNRTREFNDVTAHAEILIIRQAGEMLG 75

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
            E L + DLYVTLEPC MCAAAIS ARIRRLYYGAS+PKGGGIE+G +FYT  TCHH+PE
Sbjct: 76  SERLIDCDLYVTLEPCAMCAAAISFARIRRLYYGASDPKGGGIEHGGRFYTQPTCHHAPE 135

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
           IYPG  E  +R+I++DFF+E+R
Sbjct: 136 IYPGFCEADARKILKDFFREKR 157


>gi|322376101|ref|ZP_08050611.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus
           sp. C300]
 gi|321279051|gb|EFX56094.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus
           sp. C300]
          Length = 155

 Score =  215 bits (549), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 59/148 (39%), Positives = 78/148 (52%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           ++   FM  AL EA+ A   +EIP+G V V + +II R  N   EL+    HAEI+AI  
Sbjct: 6   EEKEAFMREALREAEIALEHDEIPIGCVIVKDGEIIGRGHNAREELQRAVMHAEIMAIEN 65

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
                    L +  L+VT+EPC MC+ AI LARI  + YGA N K G   +     T   
Sbjct: 66  ANVSEESWRLLDCTLFVTIEPCVMCSGAIGLARIPNVVYGAKNQKFGAAGSLYDILTDER 125

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H  E+  GI E     I+QDFF+ RR
Sbjct: 126 LNHRVEVEAGILEDDCAAIMQDFFRNRR 153


>gi|34498926|ref|NP_903141.1| cytidine deaminase [Chromobacterium violaceum ATCC 12472]
 gi|34104775|gb|AAQ61132.1| probable cytidine deaminase [Chromobacterium violaceum ATCC 12472]
          Length = 244

 Score =  215 bits (549), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 52/143 (36%), Positives = 77/143 (53%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  A + AQ AA   E+PVGA+ V + +II R  N+     D +AHAE+ A+R     L
Sbjct: 96  YMRQARDLAQQAAAEGEVPVGALVVKDGEIIGRGYNQPIGRHDPSAHAEMQALRDAAARL 155

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L   DLYVTLEPC MC+ AI  AR+ R+ YGA++ K G   +    +     +H  
Sbjct: 156 RNYRLDGCDLYVTLEPCPMCSGAILHARVARVIYGAADAKTGAAGSTVDLFADPRLNHHA 215

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
            ++ G+  +     +  FF++RR
Sbjct: 216 AVFGGVEAEACAAQLSAFFRQRR 238


>gi|237653174|ref|YP_002889488.1| CMP/dCMP deaminase zinc-binding [Thauera sp. MZ1T]
 gi|237624421|gb|ACR01111.1| CMP/dCMP deaminase zinc-binding [Thauera sp. MZ1T]
          Length = 154

 Score =  215 bits (549), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 56/147 (38%), Positives = 78/147 (53%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
               +M  ALE+A+ A   +E+PVGAV V   +I+ R  N+     D TAHAEI+A+R  
Sbjct: 2   NDEDYMRAALEQARAAGAADEVPVGAVVVCGGEIVGRGFNQPIGRHDPTAHAEIMALRDA 61

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
              L    LP  +LYVTLEPC MC+ AI  ARI R+ +GA +PK G   +    +     
Sbjct: 62  AAHLGNYRLPGCELYVTLEPCAMCSGAIMHARIARVVFGARDPKTGVAGSVLDLFAEPRL 121

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H   I  G+      +++  FF  RR
Sbjct: 122 NHHATIEGGLLADECGRMLSSFFAARR 148


>gi|182682990|ref|YP_001834737.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus
           pneumoniae CGSP14]
 gi|303255537|ref|ZP_07341594.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus
           pneumoniae BS455]
 gi|303260656|ref|ZP_07346619.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus
           pneumoniae SP-BS293]
 gi|303260820|ref|ZP_07346769.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus
           pneumoniae SP14-BS292]
 gi|303263147|ref|ZP_07349070.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus
           pneumoniae BS397]
 gi|303267493|ref|ZP_07353343.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus
           pneumoniae BS457]
 gi|303269460|ref|ZP_07355227.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus
           pneumoniae BS458]
 gi|182628324|gb|ACB89272.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus
           pneumoniae CGSP14]
 gi|301800992|emb|CBW33654.1| putative deaminase [Streptococcus pneumoniae INV200]
 gi|302597498|gb|EFL64587.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus
           pneumoniae BS455]
 gi|302637657|gb|EFL68143.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus
           pneumoniae SP14-BS292]
 gi|302638186|gb|EFL68658.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus
           pneumoniae SP-BS293]
 gi|302640994|gb|EFL71374.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus
           pneumoniae BS458]
 gi|302642968|gb|EFL73265.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus
           pneumoniae BS457]
 gi|302646920|gb|EFL77144.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus
           pneumoniae BS397]
          Length = 155

 Score =  215 bits (549), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 60/149 (40%), Positives = 81/149 (54%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +++  VFM  AL EA+ A   +EIP+G V V + +II R  N   EL+    HAEI+AI 
Sbjct: 5   LEEKEVFMREALREAEIALEHDEIPIGCVIVKDGEIIGRGHNAREELQRAVMHAEIMAIE 64

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
                     L +  L+VT+EPC MC+ AI LARI  + YGA N K G   +     T  
Sbjct: 65  DANLSEESWRLLDCTLFVTIEPCVMCSGAIGLARIPNVVYGAKNQKFGAAGSLYDILTDE 124

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  E+  GI E +   I+QDFF+ RR
Sbjct: 125 RLNHRVEVEIGILEDKCAAIMQDFFRNRR 153


>gi|220930799|ref|YP_002507708.1| CMP/dCMP deaminase zinc-binding [Clostridium cellulolyticum H10]
 gi|220001127|gb|ACL77728.1| CMP/dCMP deaminase zinc-binding [Clostridium cellulolyticum H10]
          Length = 152

 Score =  215 bits (549), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 56/148 (37%), Positives = 82/148 (55%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
            K   FM  A+++A+ A    E PVGAV V N +II+   NR  E  DVT+HAEI A++ 
Sbjct: 3   TKNEQFMLAAIQQAKEAYKNGESPVGAVIVKNGEIIAYGCNRREEKLDVTSHAEIEALKK 62

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
             + +    L   D+YVTLEPC MCA AI  +RI+ LY GA + K G   +    + +  
Sbjct: 63  AAKEIGTWKLDGCDMYVTLEPCPMCAGAIIQSRIKTLYIGAMDKKSGSAGSVVDLFRVPQ 122

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H  ++  G+  +    I+ +FFK+ R
Sbjct: 123 FNHRVDVVYGLMFEECGTILTEFFKQLR 150


>gi|308275014|emb|CBX31613.1| tRNA-specific adenosine deaminase [uncultured Desulfobacterium sp.]
          Length = 156

 Score =  215 bits (549), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 59/150 (39%), Positives = 88/150 (58%), Gaps = 1/150 (0%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAI 59
           M +   +M  A++EA+ A    E+P+GA+ V    +++S A N    L D  AHAEILA+
Sbjct: 5   MNEHEAYMELAIKEAKKAGQNCEVPIGAILVDEKGQVVSLAHNSTITLCDPCAHAEILAL 64

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
           R  C I+    L  + +YVT+EPC MC  AI  AR+++L +GA +PK G   +   F   
Sbjct: 65  RNACSIVGNYRLLNMTIYVTIEPCIMCMGAIIHARLKKLVFGAYDPKWGAAGSLYNFAND 124

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
              +H  EI PGI E+  + ++QDFFK++R
Sbjct: 125 NRLNHKTEIIPGICEKECKDLMQDFFKKKR 154


>gi|293570161|ref|ZP_06681239.1| tRNA-specific adenosine deaminase [Enterococcus faecium E1071]
 gi|291587310|gb|EFF19196.1| tRNA-specific adenosine deaminase [Enterococcus faecium E1071]
          Length = 171

 Score =  215 bits (549), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 54/143 (37%), Positives = 79/143 (55%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
           +   +M  AL EA+ A + +E+P+GAV VL+ K+I R  N     +D T HAE+LAI+  
Sbjct: 10  EKEKWMRLALAEAKKAEMLHEVPIGAVVVLDGKVIGRGYNLRETTQDATTHAEMLAIKEA 69

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
           C  +    L +  L+VTLEPC MC+ A+ L+R+  +Y+GA +PKGG              
Sbjct: 70  CEKVGSWRLEDAALFVTLEPCPMCSGAMILSRVAEVYFGAYDPKGGTAGTLMNLLEDERF 129

Query: 123 HHSPEIYPGISEQRSRQIIQDFF 145
           +H   +  GI E     I+ DFF
Sbjct: 130 NHQAYVEGGILEDECGMILTDFF 152


>gi|149190045|ref|ZP_01868322.1| cytosine/adenosine deaminase [Vibrio shilonii AK1]
 gi|148836075|gb|EDL53035.1| cytosine/adenosine deaminase [Vibrio shilonii AK1]
          Length = 178

 Score =  215 bits (549), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 55/148 (37%), Positives = 79/148 (53%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
            +   FM  A+E A +A    E+PVGAV V   KII+   N++    D TAHAE+  IR 
Sbjct: 12  DEDRRFMQRAMELANHAESEGEVPVGAVLVRGGKIIAEGWNQSIGNHDATAHAEMQVIRK 71

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
             + L    L +  LYVTLEPC MCA A+  +R++R+ +GA + K G        +    
Sbjct: 72  AGQNLENYRLLDTTLYVTLEPCPMCAGALLHSRVKRVVFGAPDLKAGAAGTVLNLFESQA 131

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H  ++  G+ E+  R  +Q FFK RR
Sbjct: 132 SYHYADVESGLLEEECRHQLQAFFKRRR 159


>gi|299820898|ref|ZP_07052787.1| tRNA-specific adenosine deaminase [Listeria grayi DSM 20601]
 gi|299817919|gb|EFI85154.1| tRNA-specific adenosine deaminase [Listeria grayi DSM 20601]
          Length = 173

 Score =  215 bits (549), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 55/146 (37%), Positives = 86/146 (58%), Gaps = 1/146 (0%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M+K  +FM  A++EA+ A    E+P+GAV VL+N+II R  N     ++   HAEILAI+
Sbjct: 14  MEKA-IFMEEAIKEARKAQALGEVPIGAVVVLDNEIIGRGHNLRETTQNAITHAEILAIQ 72

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
             C+      L E ++YVTLEPC MC+ AI L+R++++YYGA +PK G            
Sbjct: 73  AACQNRESWRLSEAEIYVTLEPCPMCSGAILLSRLKKVYYGAPDPKAGTAGTLMNLLQDD 132

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFK 146
             +H+ E+  G+ +    +++  FF+
Sbjct: 133 RFNHTCEVEAGLLQTECAELLTSFFR 158


>gi|302037080|ref|YP_003797402.1| tRNA-specific adenosine deaminase [Candidatus Nitrospira defluvii]
 gi|300605144|emb|CBK41477.1| tRNA-specific adenosine deaminase [Candidatus Nitrospira defluvii]
          Length = 162

 Score =  215 bits (548), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 55/146 (37%), Positives = 81/146 (55%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
              FM  AL  A++A L  E+P+ A+ V    +I++A N     +D TAHAE++ I+   
Sbjct: 8   DTRFMQQALTLARSAPLIGEVPIAALLVHEGIVIAQAHNLRETRQDPTAHAEVIVIQDAA 67

Query: 64  RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123
           R +    L    LYVTLEPCTMC  AI LARI RL + A++PK G   +          +
Sbjct: 68  RHMGSWRLINTTLYVTLEPCTMCIGAIVLARIPRLVFAATDPKAGACGSIMNIPPEPRLN 127

Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149
           H  E+  G+  + S+ ++QDFF++ R
Sbjct: 128 HRVEVVGGVCAEESQALLQDFFQQLR 153


>gi|261820536|ref|YP_003258642.1| tRNA-specific adenosine deaminase [Pectobacterium wasabiae WPP163]
 gi|261604549|gb|ACX87035.1| CMP/dCMP deaminase zinc-binding protein [Pectobacterium wasabiae
           WPP163]
          Length = 168

 Score =  215 bits (548), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 61/147 (41%), Positives = 74/147 (50%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
               +M  AL  AQ A    E+PVGAV VL+NK I    NR     D TAHAEI+A+R G
Sbjct: 6   NDEYWMRYALALAQRAQDEGEVPVGAVLVLDNKAIGEGWNRPIGHHDPTAHAEIMALRQG 65

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
             +L    L E  LYVTLEPC MCA A+   RI RL YGAS+ K G   +          
Sbjct: 66  GAVLQNYRLLETTLYVTLEPCIMCAGAMIHGRIGRLVYGASDEKTGAAGSLLDILRHPGM 125

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H   I  G+        +  FF+ RR
Sbjct: 126 NHQIVIESGVLAGECSATLSAFFRLRR 152


>gi|315180919|gb|ADT87833.1| zinc-binding domain protein [Vibrio furnissii NCTC 11218]
          Length = 189

 Score =  215 bits (548), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 56/147 (38%), Positives = 77/147 (52%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
           +   FM  A+  A+ A    E+PVGAV V +  II+   NR+    D TAHAEI  +R  
Sbjct: 11  EDEQFMRRAMALAEQAEAEGEVPVGAVLVKDGHIIAEGWNRSIGACDATAHAEIQVLRQA 70

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
              L    L E  LYVTLEPC MCA A+  +R++R+ YGA + K G        ++    
Sbjct: 71  GEALHNYRLLETTLYVTLEPCPMCAGALLHSRVKRIVYGAPDLKAGAAGTVLDLFSSQAA 130

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H   +  G+ E   RQ +Q FF+ RR
Sbjct: 131 YHYATVEKGLLEDECRQQLQAFFQRRR 157


>gi|312864368|ref|ZP_07724601.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Streptococcus downei F0415]
 gi|311100089|gb|EFQ58300.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Streptococcus downei F0415]
          Length = 157

 Score =  215 bits (548), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 58/148 (39%), Positives = 80/148 (54%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
            +   FM  AL+EAQ +  + EIP+G V V + +II R  N   EL     HAEI+AI  
Sbjct: 7   DQKKAFMQEALKEAQKSLAKEEIPIGCVIVKDGQIIGRGHNAREELNQAIMHAEIMAINQ 66

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
             +      L +  L+VT+EPC MC+ AI LARI ++ YGA N K G   +     T   
Sbjct: 67  ANQTEGNWRLLDSALFVTIEPCVMCSGAIGLARIPQVIYGAPNQKFGAAGSLYDILTDQR 126

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H  ++  GI E    +I+QDFF+ RR
Sbjct: 127 LNHHVQVETGILEADCAKIMQDFFRNRR 154


>gi|319775162|ref|YP_004137650.1| tRNA-specific adenosine deaminase [Haemophilus influenzae F3047]
 gi|329122920|ref|ZP_08251491.1| tRNA-specific adenosine deaminase [Haemophilus aegyptius ATCC
           11116]
 gi|317449753|emb|CBY85960.1| tRNA-specific adenosine deaminase [Haemophilus influenzae F3047]
 gi|327471851|gb|EGF17291.1| tRNA-specific adenosine deaminase [Haemophilus aegyptius ATCC
           11116]
          Length = 173

 Score =  215 bits (548), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 63/147 (42%), Positives = 81/147 (55%), Gaps = 1/147 (0%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMG 62
               M  ALE A  A    EIPVGAV V +   II    N +    D TAHAEI+A+R G
Sbjct: 11  DEKMMRYALELADKAEALGEIPVGAVLVDDAGNIIGEGWNLSIVQSDPTAHAEIIALRNG 70

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
            + +    L    LYVTLEPCTMCA AI  +RIRRL +GAS+ K G I +   F+     
Sbjct: 71  AKNIQNYRLLNSTLYVTLEPCTMCAGAILHSRIRRLVFGASDYKTGAIGSRFHFFDDYKM 130

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H+ EI  G+  +   Q +  FF++RR
Sbjct: 131 NHTLEITSGVLAEECSQKLSTFFQKRR 157


>gi|94501251|ref|ZP_01307773.1| cytidine/deoxycytidylate deaminase family protein [Oceanobacter sp.
           RED65]
 gi|94426678|gb|EAT11664.1| cytidine/deoxycytidylate deaminase family protein [Oceanobacter sp.
           RED65]
          Length = 164

 Score =  215 bits (548), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 64/147 (43%), Positives = 90/147 (61%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
           +   FM+ A+++A+ A   NE+PVGAV VL+ ++I    N+     D TAHAE++A+R  
Sbjct: 6   QDEHFMALAIQQAKKADALNEVPVGAVVVLDGEVIGEGYNQPISGCDPTAHAEVMALRQA 65

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
            + +S   L   DLYVT+EPCTMCA AI  +RIRRL YGA+ PK G IE+     T +  
Sbjct: 66  AKNVSNYRLVNADLYVTIEPCTMCAGAIVHSRIRRLVYGATEPKAGVIESQQTILTQSYF 125

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H  E+  GI   +   I+Q FF+ RR
Sbjct: 126 NHRVEVVSGILLDQCTDIVQAFFRRRR 152


>gi|91792629|ref|YP_562280.1| CMP/dCMP deaminase, zinc-binding [Shewanella denitrificans OS217]
 gi|91714631|gb|ABE54557.1| CMP/dCMP deaminase, zinc-binding [Shewanella denitrificans OS217]
          Length = 177

 Score =  215 bits (548), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 52/147 (35%), Positives = 77/147 (52%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
           K   +M  A+  A+ A  + E+PVGAV V +N++++   N +    D +AHAE+  IR  
Sbjct: 20  KDEHWMRVAMSMAEEAEAKGEVPVGAVLVKDNQLLATGFNLSISEHDCSAHAEMACIRAA 79

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
             ++    L +  LYVTLEPC MCA A+  ARI RL +GA++ K G   +          
Sbjct: 80  GTLIENYRLLDTTLYVTLEPCPMCAGAMVHARIARLVFGATDLKTGAAGSVMNLLQHPGL 139

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H  EI  G+  +     +  FFK RR
Sbjct: 140 NHQLEITSGVLAEPCAAQLSAFFKRRR 166


>gi|114565589|ref|YP_752743.1| hypothetical protein Swol_0013 [Syntrophomonas wolfei subsp. wolfei
           str. Goettingen]
 gi|114336524|gb|ABI67372.1| tRNA-adenosine deaminase [Syntrophomonas wolfei subsp. wolfei str.
           Goettingen]
          Length = 151

 Score =  215 bits (548), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 58/147 (39%), Positives = 80/147 (54%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
           +   FM  ALEEA+ A  R EIPVGA+ V N KII+RA N     +D TAHAE+LA++  
Sbjct: 2   QHEDFMRHALEEAREAYKRGEIPVGAIVVHNGKIIARAHNEKESYQDATAHAEMLALQRA 61

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
            R L    L E  LY TLEPC MCA A+   R+  L YG ++PK G   +          
Sbjct: 62  ARHLGHWRLNESVLYCTLEPCVMCAGAMVNVRLGHLVYGVTDPKAGSAGSIYDIVRSPAL 121

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H   +  G+ ++   ++++ FF   R
Sbjct: 122 NHQVVVEGGVLKEECSELLKRFFASLR 148


>gi|187928419|ref|YP_001898906.1| CMP/dCMP deaminase zinc-binding [Ralstonia pickettii 12J]
 gi|187725309|gb|ACD26474.1| CMP/dCMP deaminase zinc-binding [Ralstonia pickettii 12J]
          Length = 182

 Score =  215 bits (548), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 52/148 (35%), Positives = 79/148 (53%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           ++   +M  AL +A+ A  + E+PVGAV V  N+I+    N      D +AHAE+ A+R 
Sbjct: 17  ERDGYWMQQALVQAKFAWGQGEVPVGAVVVRGNEIVGVGYNAPIGTHDPSAHAEMRALRQ 76

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
               L    LP+ +++VTLEPC MCA A+  AR+ R+ YGA +PK G   +    +    
Sbjct: 77  AAEKLGNYRLPDCEVFVTLEPCVMCAGAMLHARVARVVYGAPDPKTGAAGSILDLFAETR 136

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H   I   +  Q    +++ FF ERR
Sbjct: 137 LNHQTAITGSVLAQECGDMLRAFFAERR 164


>gi|241662996|ref|YP_002981356.1| CMP/dCMP deaminase zinc-binding [Ralstonia pickettii 12D]
 gi|240865023|gb|ACS62684.1| CMP/dCMP deaminase zinc-binding [Ralstonia pickettii 12D]
          Length = 182

 Score =  215 bits (548), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 52/148 (35%), Positives = 79/148 (53%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           ++   +M  AL +A+ A  + E+PVGAV V  N+I+    N      D +AHAE+ A+R 
Sbjct: 17  ERDGYWMQQALVQAKFAWGQGEVPVGAVVVRGNEIVGVGYNAPIGTHDPSAHAEMRALRQ 76

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
               L    LP+ +++VTLEPC MCA A+  AR+ R+ YGA +PK G   +    +    
Sbjct: 77  AAEKLGNYRLPDCEVFVTLEPCVMCAGAMLHARVARVVYGAPDPKTGAAGSILDLFAETR 136

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H   I   +  Q    +++ FF ERR
Sbjct: 137 LNHQTAITGSVLAQECGDMLRAFFAERR 164


>gi|225869728|ref|YP_002745675.1| deaminase [Streptococcus equi subsp. equi 4047]
 gi|225699132|emb|CAW92326.1| putative deaminase [Streptococcus equi subsp. equi 4047]
          Length = 164

 Score =  215 bits (548), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 56/148 (37%), Positives = 80/148 (54%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           ++   FM  AL+EA+ + L++EIP+G V V    II R  N   E      HAEI+AI  
Sbjct: 6   QEQEYFMREALKEAEKSLLKDEIPIGCVIVKAGHIIGRGHNAREERNQAIMHAEIMAINE 65

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
                    L +  L+VT+EPC MC+ AI LARI  + YGASN K GG  +  Q  T   
Sbjct: 66  ANAHEGNWRLLDTTLFVTIEPCVMCSGAIGLARIPHVVYGASNQKFGGAGSLYQILTDER 125

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H  ++  G+      +++Q FF++RR
Sbjct: 126 LNHRVQLEVGLLADDCAKLMQTFFRQRR 153


>gi|237808810|ref|YP_002893250.1| CMP/dCMP deaminase zinc-binding [Tolumonas auensis DSM 9187]
 gi|237501071|gb|ACQ93664.1| CMP/dCMP deaminase zinc-binding [Tolumonas auensis DSM 9187]
          Length = 164

 Score =  215 bits (548), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 57/148 (38%), Positives = 80/148 (54%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           ++   +M  A++ A+ A    E+PVGAV VLNN++I    N +    D  AHAEI+AIR 
Sbjct: 5   EQDIHWMQYAMQLARRAEEAGEVPVGAVLVLNNEVIGEGWNLSICRHDPCAHAEIMAIRQ 64

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
             + +    L    LYVTLEPC MCA A+  +RI RL YGAS+ K G   +     T   
Sbjct: 65  AGQNIGNYRLLGATLYVTLEPCIMCAGAMIHSRIERLVYGASDLKTGAAGSVFDVLTDPR 124

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H   +  GI  +   Q + +FF+ RR
Sbjct: 125 HNHIVSVIGGIEAEACSQQLSNFFRRRR 152


>gi|255744661|ref|ZP_05418612.1| tRNA-specific adenosine-34 deaminase [Vibrio cholera CIRS 101]
 gi|262161205|ref|ZP_06030316.1| tRNA-specific adenosine-34 deaminase [Vibrio cholerae INDRE 91/1]
 gi|262168710|ref|ZP_06036405.1| tRNA-specific adenosine-34 deaminase [Vibrio cholerae RC27]
 gi|255737692|gb|EET93086.1| tRNA-specific adenosine-34 deaminase [Vibrio cholera CIRS 101]
 gi|262022828|gb|EEY41534.1| tRNA-specific adenosine-34 deaminase [Vibrio cholerae RC27]
 gi|262028955|gb|EEY47608.1| tRNA-specific adenosine-34 deaminase [Vibrio cholerae INDRE 91/1]
          Length = 175

 Score =  215 bits (548), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 55/147 (37%), Positives = 79/147 (53%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
           +   FM  A+  A  A  + E+PVGAV V + +II+   N +    D TAHAEI  IR  
Sbjct: 9   QDEQFMRRAIVLAAQAEAQGEVPVGAVLVRDGEIIAEGWNGSITNHDATAHAEIEVIRKA 68

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
            + LS   L +  LYVTLEPC MCA A+  +R++R+ YGA + K G        ++    
Sbjct: 69  GKALSNYRLLDTTLYVTLEPCPMCAGALLHSRVKRIVYGAPDLKAGAAGTVMDLFSSQAA 128

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H   +  G+ E+  R  +Q FF+ RR
Sbjct: 129 YHYATVEKGLLEEECRAQLQAFFQRRR 155


>gi|212634313|ref|YP_002310838.1| cytidine/deoxycytidylate deaminase [Shewanella piezotolerans WP3]
 gi|212555797|gb|ACJ28251.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [Shewanella
           piezotolerans WP3]
          Length = 186

 Score =  215 bits (548), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 52/144 (36%), Positives = 77/144 (53%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           +  + FM  A+E A  A  + E+PVGAV V + +++S   N +  L D +AHAE+  IR 
Sbjct: 18  EDDSRFMKMAMEMAAKAEEKGEVPVGAVLVKDGEVVSAGFNYSIGLHDPSAHAEMQCIRQ 77

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
             ++L    L +  LYVTLEPC MCA AI  +RI RL YGA++ K G             
Sbjct: 78  AGQLLENYRLLDTTLYVTLEPCAMCAGAIVHSRISRLVYGANDEKTGAAGTVIDIVRHPA 137

Query: 122 CHHSPEIYPGISEQRSRQIIQDFF 145
            +H  E+  G+ ++   + +  FF
Sbjct: 138 FNHQVEVTAGVRDEACSEQLSAFF 161


>gi|304398612|ref|ZP_07380484.1| CMP/dCMP deaminase zinc-binding [Pantoea sp. aB]
 gi|304353823|gb|EFM18198.1| CMP/dCMP deaminase zinc-binding [Pantoea sp. aB]
          Length = 155

 Score =  214 bits (547), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 57/142 (40%), Positives = 81/142 (57%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  AL  A+ A  ++E+PVGAV V N+++I    NR     D TAHAEI+A+R G ++L 
Sbjct: 1   MRHALGLARRAWEQSEVPVGAVLVQNDQVIGEGWNRPIGQHDPTAHAEIMALRQGGKVLE 60

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
              L +  LYVTLEPC MCA A+  +RI RL YGA + K G   +          +H  E
Sbjct: 61  NYRLLDTTLYVTLEPCVMCAGAMVHSRITRLVYGAHDVKSGAAGSLLDVLGHPGMNHQIE 120

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
           ++ G+  +    ++ DFF+ RR
Sbjct: 121 LHSGVLAEECAAMLSDFFRMRR 142


>gi|15601943|ref|NP_245015.1| hypothetical protein PM0078 [Pasteurella multocida subsp. multocida
           str. Pm70]
 gi|12720287|gb|AAK02162.1| unknown [Pasteurella multocida subsp. multocida str. Pm70]
          Length = 166

 Score =  214 bits (547), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 60/147 (40%), Positives = 81/147 (55%), Gaps = 1/147 (0%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMG 62
              +M  AL  A  A    EIPVGAV V     ++    N +    D TAHAEI+A+R G
Sbjct: 6   DEKWMRHALRLADKAEQLGEIPVGAVLVDEQGNLLGEGWNLSISESDPTAHAEIVALRQG 65

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
            + L    L    LYVTLEPCTMCA AI  +RI+RL +GAS+ K G + +   F+     
Sbjct: 66  GQRLQNYRLLNTTLYVTLEPCTMCAGAILHSRIKRLVFGASDYKTGAVGSRFHFFDDYKM 125

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H+ EI  G+ ++   Q I  FF++RR
Sbjct: 126 NHAIEITAGVLQEECSQKISAFFQKRR 152


>gi|254473540|ref|ZP_05086936.1| cytosine deaminase [Pseudovibrio sp. JE062]
 gi|211957252|gb|EEA92456.1| cytosine deaminase [Pseudovibrio sp. JE062]
          Length = 148

 Score =  214 bits (547), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 78/146 (53%), Positives = 105/146 (71%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
            + FM  AL EA+ A  R E+P+G V V + K++S AGNR  EL D TAHAE+LAIR   
Sbjct: 2   NSTFMDMALNEARAAEARGEVPIGCVVVKDGKVLSAAGNRTLELNDPTAHAEVLAIREAG 61

Query: 64  RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123
           + L+ + L   DLYVTLEPC MCAAAIS ARIRRLYYGA + KGGG+++G +FY+  TCH
Sbjct: 62  KQLNSQRLEGCDLYVTLEPCPMCAAAISFARIRRLYYGAGDAKGGGVDHGVRFYSSPTCH 121

Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149
           H+P++Y G++E  S  +++ FF+ +R
Sbjct: 122 HTPDVYSGLAETDSAAMLKTFFQGKR 147


>gi|256848137|ref|ZP_05553581.1| tRNA-adenosine deaminase [Lactobacillus coleohominis 101-4-CHN]
 gi|256715197|gb|EEU30174.1| tRNA-adenosine deaminase [Lactobacillus coleohominis 101-4-CHN]
          Length = 169

 Score =  214 bits (547), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 54/143 (37%), Positives = 80/143 (55%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  A+ EA  A L  E+P+GAV V + +II    N   + +    HAEILAI   C  L
Sbjct: 12  FMRAAINEAHQAELLGEVPIGAVIVKDGQIIGAGHNMREKYQQSIYHAEILAIMEACDAL 71

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L + DLYVTLEPC MC+ AI  +R+R++YY A +PK G + +       +  +H  
Sbjct: 72  HSWRLEDCDLYVTLEPCIMCSGAIIHSRLRQVYYAAPDPKAGAVNSLYTLLNDSRLNHQV 131

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
            ++ G+ +    Q+++ FF+E R
Sbjct: 132 TVHQGLLQDECSQMLKHFFREIR 154


>gi|282852744|ref|ZP_06262086.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Lactobacillus gasseri 224-1]
 gi|282556486|gb|EFB62106.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Lactobacillus gasseri 224-1]
          Length = 150

 Score =  214 bits (547), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 50/143 (34%), Positives = 85/143 (59%), Gaps = 1/143 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  A  +A+ A  + E+P+GA+ V  +  +I    NR    +D T HAE++AIR  C+ L
Sbjct: 1   MQLAFAQAKKAEDQGEVPIGAIVVDKDGNVIGEGYNRRELDEDATQHAEMIAIRQACQNL 60

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  L++TLEPC MC+ AI  +R+  +YYGA +PK G   +    + +   +H P
Sbjct: 61  GSWRLVDCSLFITLEPCPMCSGAIINSRLAEVYYGAFDPKAGAAGSVIDLFKVEKFNHHP 120

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           +++ G+ + ++ Q+++DFF+E R
Sbjct: 121 KVFGGLFKDQAAQMLKDFFREIR 143


>gi|78485955|ref|YP_391880.1| cytidine/deoxycytidylate deaminase, zinc-binding region
           [Thiomicrospira crunogena XCL-2]
 gi|78364241|gb|ABB42206.1| tRNA-adenosine deaminase [Thiomicrospira crunogena XCL-2]
          Length = 166

 Score =  214 bits (547), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 50/148 (33%), Positives = 82/148 (55%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           ++   +M+ AL  A+ A  + EIPVGAV V ++K+I+   N+  +  D TAHAE++A+R 
Sbjct: 12  EQDIFWMTHALSLAKKAEQQGEIPVGAVLVKDSKLIAEGWNQTIQAHDPTAHAEVVALRK 71

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
                    L ++ LYVTLEPC MCA A+  AR++RL   A + + G   +         
Sbjct: 72  AGIEEENYRLNDLTLYVTLEPCPMCAGAMVHARLKRLVIAAKDFRTGAAGSLINLVQEPR 131

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H  +   G+ E  + +++  FF++RR
Sbjct: 132 LNHQVKTDFGVLESEASEMLSGFFRKRR 159


>gi|77166061|ref|YP_344586.1| cytidine/deoxycytidylate deaminase, zinc-binding region
           [Nitrosococcus oceani ATCC 19707]
 gi|254436457|ref|ZP_05049961.1| Cytidine and deoxycytidylate deaminase zinc-binding region domain
           protein [Nitrosococcus oceani AFC27]
 gi|76884375|gb|ABA59056.1| tRNA-adenosine deaminase [Nitrosococcus oceani ATCC 19707]
 gi|207087927|gb|EDZ65202.1| Cytidine and deoxycytidylate deaminase zinc-binding region domain
           protein [Nitrosococcus oceani AFC27]
          Length = 155

 Score =  214 bits (547), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 57/148 (38%), Positives = 76/148 (51%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           +K   +M  AL  A+ A    E+PVGAV V   +++ +  N      D TAHAEI AIR 
Sbjct: 8   EKDIPWMHHALALARYAEEAGEVPVGAVVVQEGEMVGKGWNCPINSHDPTAHAEIQAIRA 67

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
             + L    L    LYVTLEPC MCA AI  ARI+R+ +GA +PKGG   +         
Sbjct: 68  ASQKLGNYRLVGTTLYVTLEPCAMCAGAIIQARIQRVVFGAFDPKGGAAGSALNILPGER 127

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H  E   G+  +    I+  FF+ RR
Sbjct: 128 LNHQVECQGGVLAESCGAILSAFFRARR 155


>gi|294140156|ref|YP_003556134.1| cytidine/deoxycytidylate deaminase family protein [Shewanella
           violacea DSS12]
 gi|293326625|dbj|BAJ01356.1| cytidine/deoxycytidylate deaminase family protein [Shewanella
           violacea DSS12]
          Length = 169

 Score =  214 bits (547), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 52/149 (34%), Positives = 74/149 (49%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M     FMS A+E A  A    E+PVGAV V + ++IS   N    L D +AHAE+  +R
Sbjct: 1   MALDQHFMSMAMEMAHKAEAVGEVPVGAVLVKHGQVISAGFNYCIGLHDPSAHAEMQCLR 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              ++     L +  LYVTLEPC MCA A+  +RI RL +GA + K G            
Sbjct: 61  QAGKVTENYRLLDTTLYVTLEPCAMCAGAMVHSRIARLVFGAKDEKTGAAGTVIDLVRHP 120

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  ++  G+      + +  FF+ RR
Sbjct: 121 DFNHQLQVSDGVLADECSEQLSQFFRRRR 149


>gi|330718918|ref|ZP_08313518.1| cytosine/adenosine deaminase [Leuconostoc fallax KCTC 3537]
          Length = 169

 Score =  214 bits (547), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 61/148 (41%), Positives = 87/148 (58%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           ++ N FM  AL+EA+ A    E+P+GAV V +N+II+RA N   + +  TAHAE+LAI  
Sbjct: 10  EQINDFMQAALDEARQAGSEGEVPIGAVIVHDNQIIARAHNHREQGQQATAHAELLAIEA 69

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
             +      L    L+VTLEPC MCA AI  +RI  +YYGA + KGG +++         
Sbjct: 70  ANQAAQSWRLENTALFVTLEPCMMCAGAIINSRIPVIYYGAQDAKGGAVKSLYTLLEDER 129

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H  E++PGI      Q++Q+FF E R
Sbjct: 130 LNHRVEVHPGIKSDECGQLLQNFFSEIR 157


>gi|187735588|ref|YP_001877700.1| CMP/dCMP deaminase zinc-binding [Akkermansia muciniphila ATCC
           BAA-835]
 gi|187425640|gb|ACD04919.1| CMP/dCMP deaminase zinc-binding [Akkermansia muciniphila ATCC
           BAA-835]
          Length = 181

 Score =  214 bits (547), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 50/148 (33%), Positives = 74/148 (50%), Gaps = 1/148 (0%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
               FM  A++E++ A ++ E+PVGA+ V + ++I R  N+   LKD TAHAE++A+   
Sbjct: 12  SDEWFMRQAMKESRKALVKGEVPVGAIVVKDGRVIGRGWNQVETLKDATAHAEMIALTAA 71

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT-LAT 121
              L    L    LYVT EPC MCA AI   R  R+ +G  + K G              
Sbjct: 72  QEALGDWRLEGCTLYVTKEPCPMCAGAIVHCRPDRVVFGCPDAKTGAAGGWINLLDSNPP 131

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H  E+ PG+        +Q+FF+  R
Sbjct: 132 LNHKCEVRPGVLGDECLLHLQEFFRAAR 159


>gi|52424459|ref|YP_087596.1| hypothetical protein MS0404 [Mannheimia succiniciproducens MBEL55E]
 gi|52306511|gb|AAU37011.1| unknown [Mannheimia succiniciproducens MBEL55E]
          Length = 176

 Score =  214 bits (547), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 59/147 (40%), Positives = 79/147 (53%), Gaps = 1/147 (0%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMG 62
               M+ AL  A  A    EIPVGAV V     II    N +    D TAHAEI+A+R  
Sbjct: 8   DEKMMNRALFLADKAEALGEIPVGAVLVDERGNIIGEGWNLSIVNSDPTAHAEIIALRNA 67

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
            + +    L    LYVTLEPCTMCA AI  +RI+RL +GAS+ K G + +   F+     
Sbjct: 68  AQKIQNYRLLNTTLYVTLEPCTMCAGAILHSRIKRLVFGASDYKTGAVGSRFHFFEDYKM 127

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H  EI  G+ + +  Q +  FF++RR
Sbjct: 128 NHGVEITSGVLQDQCSQKLSRFFQKRR 154


>gi|302334869|ref|YP_003800076.1| tRNA-adenosine deaminase [Olsenella uli DSM 7084]
 gi|301318709|gb|ADK67196.1| tRNA-adenosine deaminase [Olsenella uli DSM 7084]
          Length = 163

 Score =  214 bits (547), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 61/147 (41%), Positives = 83/147 (56%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
           +   FM  ALEEA  AA  +E+P+GAV V   ++I+RA NR     D +AHAE  A+   
Sbjct: 11  EDERFMGLALEEACIAATEDEVPIGAVVVCGGEVIARAHNRRETDGDPSAHAEFSAMVQA 70

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
            R L +  L    +YVTLEPC MCA  +  AR+ R  YGA++PKGG +         A  
Sbjct: 71  ARALGRWRLTGCTVYVTLEPCLMCAGLMVNARVDRCVYGAADPKGGAVGTLYDVSDDARL 130

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +HS  +  G+ E    QI++DFF+ RR
Sbjct: 131 NHSFPVTAGVLEDECAQILRDFFRVRR 157


>gi|330445259|ref|ZP_08308911.1| tRNA-specific adenosine deaminase monomer [Photobacterium
           leiognathi subsp. mandapamensis svers.1.1.]
 gi|328489450|dbj|GAA03408.1| tRNA-specific adenosine deaminase monomer [Photobacterium
           leiognathi subsp. mandapamensis svers.1.1.]
          Length = 163

 Score =  214 bits (546), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 53/142 (37%), Positives = 76/142 (53%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  A+E A  A    E+PVGAV V N ++I    NR+    D TAHAEI+A+R   ++L 
Sbjct: 1   MRRAMELAAKAEGEGEVPVGAVVVHNGQVIGEGWNRSIGQHDATAHAEIMALRQAGKVLE 60

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
              L +  +YVTLEPC MCA A+  +R+ ++ YGA + K G   +     +    +H   
Sbjct: 61  NYRLLDTTVYVTLEPCPMCAGAMVHSRVGKVVYGADDLKTGAAGSTMNLLSYDGVNHHVG 120

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
           +  G+     R  +Q FFK RR
Sbjct: 121 LVSGVLADECRAQLQAFFKRRR 142


>gi|239833547|ref|ZP_04681875.1| CMP/dCMP deaminase zinc-binding [Ochrobactrum intermedium LMG 3301]
 gi|239821610|gb|EEQ93179.1| CMP/dCMP deaminase zinc-binding [Ochrobactrum intermedium LMG 3301]
          Length = 173

 Score =  214 bits (546), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 91/148 (61%), Positives = 109/148 (73%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           +     M  ALEEA+ A  R E+P+GAV V    II+RAGNR REL DVTAHAE+LAIR 
Sbjct: 26  QNDTTPMEIALEEARAAGARGEVPIGAVIVHQGTIIARAGNRTRELNDVTAHAEVLAIRE 85

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
               L  E L   DLYVTLEPC MCAAAIS ARIRRLYYGA++PKGGG+E+G +FYT  T
Sbjct: 86  AGETLQSERLVGCDLYVTLEPCAMCAAAISFARIRRLYYGATDPKGGGVEHGPRFYTQPT 145

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
           CHH PEIY G SE  S++I+++FF++RR
Sbjct: 146 CHHVPEIYAGFSEGDSQKILREFFRDRR 173


>gi|27382607|ref|NP_774136.1| nitrogen fixation protein [Bradyrhizobium japonicum USDA 110]
 gi|27355779|dbj|BAC52761.1| nitrogen fixation protein [Bradyrhizobium japonicum USDA 110]
          Length = 152

 Score =  214 bits (546), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 73/143 (51%), Positives = 103/143 (72%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  AL+ A+NA    E+P+G V V N ++I+ A NR     D TAHAEI+A+R   + +
Sbjct: 10  FMDLALKTAENAGKAGEVPIGCVVVRNYEVIATAANRTLTDYDPTAHAEIVALREAAKKI 69

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
             E L + DLYVTLEPCTMCA AIS AR+RRLYYGA++PKGG +E+G +F+   TCHH+P
Sbjct: 70  GSERLVDCDLYVTLEPCTMCAGAISFARVRRLYYGAADPKGGAVESGVRFFASPTCHHAP 129

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           ++Y G+ E  + +++++FF+ERR
Sbjct: 130 DVYSGVGESEAARLLKEFFRERR 152


>gi|149908700|ref|ZP_01897361.1| putative zinc-binding protein [Moritella sp. PE36]
 gi|149808242|gb|EDM68181.1| putative zinc-binding protein [Moritella sp. PE36]
          Length = 182

 Score =  214 bits (546), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 56/149 (37%), Positives = 83/149 (55%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           ++    +M  A+  A  A   +E+PVGAV VLN+KII    N++    D TAHAEI+A+R
Sbjct: 22  LQADERWMQHAIMLAGKAEAIDEVPVGAVIVLNDKIIGEGWNQSIISHDATAHAEIMALR 81

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              + +    L +  LYVTLEPC+MCA A+  +R++RL YGA + K G   +       A
Sbjct: 82  EAGKTVENYRLIDATLYVTLEPCSMCAGAMVHSRVKRLVYGAVDLKTGAAGSVFNLVEHA 141

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  E+  G+    +  ++  FFK RR
Sbjct: 142 QLNHQIEVRSGVFASETGALLSQFFKRRR 170


>gi|69245245|ref|ZP_00603323.1| Cytidine/deoxycytidylate deaminase, zinc-binding region
           [Enterococcus faecium DO]
 gi|257880130|ref|ZP_05659783.1| cytidine/deoxycytidylate deaminase [Enterococcus faecium 1,230,933]
 gi|257882362|ref|ZP_05662015.1| cytidine/deoxycytidylate deaminase [Enterococcus faecium 1,231,502]
 gi|257885559|ref|ZP_05665212.1| cytidine/deoxycytidylate deaminase [Enterococcus faecium 1,231,501]
 gi|257891221|ref|ZP_05670874.1| cytidine/deoxycytidylate deaminase [Enterococcus faecium 1,231,410]
 gi|257894033|ref|ZP_05673686.1| cytidine/deoxycytidylate deaminase [Enterococcus faecium 1,231,408]
 gi|258614535|ref|ZP_05712305.1| cytidine/deoxycytidylate deaminase family protein [Enterococcus
           faecium DO]
 gi|260560261|ref|ZP_05832437.1| cytidine/deoxycytidylate deaminase [Enterococcus faecium C68]
 gi|293560645|ref|ZP_06677132.1| tRNA-specific adenosine deaminase [Enterococcus faecium E1162]
 gi|294617818|ref|ZP_06697430.1| tRNA-specific adenosine deaminase [Enterococcus faecium E1679]
 gi|294621156|ref|ZP_06700343.1| tRNA-specific adenosine deaminase [Enterococcus faecium U0317]
 gi|314938786|ref|ZP_07846059.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Enterococcus faecium TX0133a04]
 gi|314941552|ref|ZP_07848438.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Enterococcus faecium TX0133C]
 gi|314947607|ref|ZP_07851016.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Enterococcus faecium TX0082]
 gi|314951363|ref|ZP_07854416.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Enterococcus faecium TX0133A]
 gi|314993109|ref|ZP_07858496.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Enterococcus faecium TX0133B]
 gi|314996760|ref|ZP_07861775.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Enterococcus faecium TX0133a01]
 gi|68195920|gb|EAN10354.1| Cytidine/deoxycytidylate deaminase, zinc-binding region
           [Enterococcus faecium DO]
 gi|257814358|gb|EEV43116.1| cytidine/deoxycytidylate deaminase [Enterococcus faecium 1,230,933]
 gi|257818020|gb|EEV45348.1| cytidine/deoxycytidylate deaminase [Enterococcus faecium 1,231,502]
 gi|257821415|gb|EEV48545.1| cytidine/deoxycytidylate deaminase [Enterococcus faecium 1,231,501]
 gi|257827581|gb|EEV54207.1| cytidine/deoxycytidylate deaminase [Enterococcus faecium 1,231,410]
 gi|257830412|gb|EEV57019.1| cytidine/deoxycytidylate deaminase [Enterococcus faecium 1,231,408]
 gi|260073606|gb|EEW61932.1| cytidine/deoxycytidylate deaminase [Enterococcus faecium C68]
 gi|291595929|gb|EFF27210.1| tRNA-specific adenosine deaminase [Enterococcus faecium E1679]
 gi|291599272|gb|EFF30302.1| tRNA-specific adenosine deaminase [Enterococcus faecium U0317]
 gi|291605396|gb|EFF34843.1| tRNA-specific adenosine deaminase [Enterococcus faecium E1162]
 gi|313589110|gb|EFR67955.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Enterococcus faecium TX0133a01]
 gi|313592389|gb|EFR71234.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Enterococcus faecium TX0133B]
 gi|313596469|gb|EFR75314.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Enterococcus faecium TX0133A]
 gi|313599640|gb|EFR78483.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Enterococcus faecium TX0133C]
 gi|313641895|gb|EFS06475.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Enterococcus faecium TX0133a04]
 gi|313645848|gb|EFS10428.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Enterococcus faecium TX0082]
          Length = 171

 Score =  214 bits (546), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 54/141 (38%), Positives = 78/141 (55%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
             +M  AL EA+ A + +E+P+GAV VL+ K+I R  N     +D T HAE+LAI+  C 
Sbjct: 12  EKWMRLALAEAKKAEMLHEVPIGAVVVLDGKVIGRGYNLRETTQDATTHAEMLAIKEACE 71

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
            +    L +  L+VTLEPC MC+ A+ L+R+  +Y+GA +PKGG              +H
Sbjct: 72  KVGSWRLEDAALFVTLEPCPMCSGAMILSRVAEVYFGAYDPKGGTAGTLMNLLEDERFNH 131

Query: 125 SPEIYPGISEQRSRQIIQDFF 145
              +  GI E     I+ DFF
Sbjct: 132 QAYVEGGILEDECGMILTDFF 152


>gi|225686059|ref|YP_002734031.1| cytidine and deoxycytidylate deaminase family protein [Brucella
           melitensis ATCC 23457]
 gi|256262820|ref|ZP_05465352.1| cytidine/deoxycytidylate deaminase [Brucella melitensis bv. 2 str.
           63/9]
 gi|225642164|gb|ACO02077.1| cytidine and deoxycytidylate deaminase family protein [Brucella
           melitensis ATCC 23457]
 gi|263092641|gb|EEZ16862.1| cytidine/deoxycytidylate deaminase [Brucella melitensis bv. 2 str.
           63/9]
 gi|326410383|gb|ADZ67447.1| cytidine and deoxycytidylate deaminase family protein [Brucella
           melitensis M28]
          Length = 157

 Score =  214 bits (546), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 93/142 (65%), Positives = 110/142 (77%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  ALEEA  A  R E+P+GAV V + +II+RAGNR RE  DVTAHAEIL IR    +L 
Sbjct: 16  MDIALEEAHAAGERGEVPIGAVIVRDGEIIARAGNRTREFNDVTAHAEILTIRQAGEMLG 75

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
            E L + DLYVTLEPC MCAAAIS ARIRRLYYGAS+PKGGGIE+G +FYT  TCHH+PE
Sbjct: 76  SERLIDCDLYVTLEPCAMCAAAISFARIRRLYYGASDPKGGGIEHGGRFYTQLTCHHAPE 135

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
           IYPG  E  +R+I++DFF+E+R
Sbjct: 136 IYPGFCEADARKILKDFFREKR 157


>gi|157376253|ref|YP_001474853.1| cytidine/deoxycytidylate deaminase family protein [Shewanella
           sediminis HAW-EB3]
 gi|157318627|gb|ABV37725.1| cytidine/deoxycytidylate deaminase family protein [Shewanella
           sediminis HAW-EB3]
          Length = 177

 Score =  214 bits (546), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 51/149 (34%), Positives = 80/149 (53%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           + +   FM+ A+ +A  A  R E+PVGAV V ++K+++   N      D +AHAE+  +R
Sbjct: 4   LDRDIHFMALAMLQAAEAEARGEVPVGAVLVKDDKVVAVGSNDCIGQHDPSAHAEMQCLR 63

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              R++    L +  LYVTLEPC MCA A+  +R+ RL +GA + K G   +        
Sbjct: 64  EAGRLVENYRLLDTTLYVTLEPCAMCAGAMVHSRVSRLVFGAKDEKTGAAGSVVDLVRHP 123

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  E+  G+ EQ   + +  FF+ RR
Sbjct: 124 RFNHQLEVNNGVLEQECSEQLSQFFRRRR 152


>gi|89898061|ref|YP_515171.1| cytosine/adenosine deaminases [Chlamydophila felis Fe/C-56]
 gi|89331433|dbj|BAE81026.1| cytosine/adenosine deaminases [Chlamydophila felis Fe/C-56]
          Length = 157

 Score =  214 bits (546), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 61/149 (40%), Positives = 85/149 (57%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           ++K   FM  AL EA+ A   +E+PVG V V +NKII+R  N   +L+D TAHAEIL I 
Sbjct: 3   IEKDIFFMKQALREARQAYDEDEVPVGCVIVKDNKIIARGHNTIEKLQDPTAHAEILCIG 62

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              + L    L +  LY TLEPC MCA AI  AR+RR+ + A + + G   +    +T  
Sbjct: 63  AAAQYLENWRLVDTVLYCTLEPCLMCAGAIQQARVRRIVWAAPDLRLGAGGSWINVFTEK 122

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
              H  E + GI  + S Q+++ FF E+R
Sbjct: 123 HPFHRVECFSGICREESEQLMKQFFIEKR 151


>gi|269216548|ref|ZP_06160402.1| tRNA-specific adenosine deaminase [Slackia exigua ATCC 700122]
 gi|269130077|gb|EEZ61159.1| tRNA-specific adenosine deaminase [Slackia exigua ATCC 700122]
          Length = 212

 Score =  214 bits (546), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 51/149 (34%), Positives = 80/149 (53%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           ++K   FM  A  EA+ A    E+P+GAV V + ++++RA NR    +D + HAE  A+R
Sbjct: 54  IEKDESFMREAYAEARRAFEEGEVPIGAVVVCDGRVVARAHNRREADRDPSGHAEFSAMR 113

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              + L +  L    +YVT+EPC MCA  +  ARI R  +GA +PK G + +    +   
Sbjct: 114 AAAQALGRWRLSGCTVYVTVEPCIMCAGLMHQARIDRCVWGAPDPKAGALGSLYAIHADE 173

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  E   G+   +   +++DFF  RR
Sbjct: 174 RLNHRFESTGGVWATQCGSLMRDFFACRR 202


>gi|310828329|ref|YP_003960686.1| alpha amylase catalytic region [Eubacterium limosum KIST612]
 gi|308740063|gb|ADO37723.1| alpha amylase catalytic region [Eubacterium limosum KIST612]
          Length = 630

 Score =  214 bits (546), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 57/142 (40%), Positives = 86/142 (60%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           MS A+EEA+      E+PVGAV + N +II+ A N+   L+D TAHAE+L IR   + L 
Sbjct: 489 MSKAIEEAERGIEEGEVPVGAVILHNGEIIAAAHNQKETLQDPTAHAEMLVIREASKKLG 548

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
           +  L + +LYVT EPC MC  A+  +RIR+L YG    + GG+E   +        ++ E
Sbjct: 549 RWRLDDCELYVTAEPCPMCMGAVIQSRIRKLVYGTWETRFGGVETTAELGKHPMLSNATE 608

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
           IY GI E++ +++++ FF+  R
Sbjct: 609 IYSGICEEKCQELLERFFQNNR 630


>gi|300717977|ref|YP_003742780.1| tRNA-specific adenosine deaminase [Erwinia billingiae Eb661]
 gi|299063813|emb|CAX60933.1| tRNA-specific adenosine deaminase [Erwinia billingiae Eb661]
          Length = 171

 Score =  214 bits (546), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 56/147 (38%), Positives = 77/147 (52%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
               +M  AL  A+ A    E+PVGAV V  +K I    NR     D TAHAEI+A+R G
Sbjct: 6   SDEFWMRHALMLARRAWEEGEVPVGAVLVQGDKAIGEGWNRPIGHHDPTAHAEIMALRQG 65

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
            ++L    L +  LYVTLEPC MCA A+   RI RL +GA + K G   +       A  
Sbjct: 66  GKVLENYRLLDTTLYVTLEPCVMCAGAMVHGRIGRLVFGARDEKTGAAGSLIDVLGHAGM 125

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H  ++  G+  +    ++ DFF+ RR
Sbjct: 126 NHQVKVEEGMLAEECAGMLSDFFRHRR 152


>gi|293390603|ref|ZP_06634937.1| tRNA-specific adenosine deaminase [Aggregatibacter
           actinomycetemcomitans D7S-1]
 gi|290951137|gb|EFE01256.1| tRNA-specific adenosine deaminase [Aggregatibacter
           actinomycetemcomitans D7S-1]
          Length = 175

 Score =  214 bits (546), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 61/147 (41%), Positives = 82/147 (55%), Gaps = 1/147 (0%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMG 62
              FM  AL  A  A    EIPVGAV V    +II    N +    D TAHAEI+A+R G
Sbjct: 9   DEKFMRHALMLAGKAEALGEIPVGAVLVSEAGEIIGEGWNLSIIHSDPTAHAEIVALRQG 68

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
            + L    L  + LYVTLEPCTMCA AI  +RI+RL +GA++ K G + +   F+     
Sbjct: 69  GQKLQNYRLLNITLYVTLEPCTMCAGAILHSRIKRLVFGAADYKTGAVGSRFHFFDDYKM 128

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H  EI  G+ +Q   + +  FF++RR
Sbjct: 129 NHVIEITGGVLQQECSEKLSAFFQKRR 155


>gi|103488226|ref|YP_617787.1| CMP/dCMP deaminase, zinc-binding [Sphingopyxis alaskensis RB2256]
 gi|98978303|gb|ABF54454.1| tRNA-adenosine deaminase [Sphingopyxis alaskensis RB2256]
          Length = 155

 Score =  214 bits (546), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 73/142 (51%), Positives = 91/142 (64%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  AL+ A+ AA   E+PVGAV V +  +I+   NR RE  D TAHAEI+A+RM    L 
Sbjct: 10  MRRALDLARIAADWGEVPVGAVIVKDGAVIAEGHNRPRESHDPTAHAEIVAMRMAAAKLG 69

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
            E L   DLYVTLEPC MCA AI+ ARI RLYYGA +PKGG + +G + +   T HH PE
Sbjct: 70  NERLDGCDLYVTLEPCAMCAGAIAHARIARLYYGADDPKGGAVVHGPRLFAQPTVHHRPE 129

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
           IY GI E  +  +++ FF  RR
Sbjct: 130 IYDGIGESEAAGLLRAFFAARR 151


>gi|322378196|ref|ZP_08052680.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus
           sp. M334]
 gi|321280826|gb|EFX57842.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus
           sp. M334]
          Length = 155

 Score =  214 bits (546), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 58/148 (39%), Positives = 78/148 (52%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           ++  VFM  AL EA+ A   +EIP+G V V +  II R  N   EL+    HAEI+AI  
Sbjct: 6   EEKEVFMREALREAEIALEHDEIPIGCVIVKDGAIIGRGHNAREELQRAVMHAEIMAIEN 65

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
                    L +  L+VT+EPC MC+ AI LARI  + YGA N K G   +     T   
Sbjct: 66  ANLSEESWRLLDCTLFVTIEPCVMCSGAIGLARIPNVVYGAKNQKFGAAGSLYDILTDER 125

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H  ++  GI E     I+Q+FF+ RR
Sbjct: 126 LNHRVDVETGILEDECAAIMQNFFRNRR 153


>gi|119946930|ref|YP_944610.1| CMP/dCMP deaminase, zinc-binding [Psychromonas ingrahamii 37]
 gi|119865534|gb|ABM05011.1| CMP/dCMP deaminase, zinc-binding [Psychromonas ingrahamii 37]
          Length = 176

 Score =  214 bits (546), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 57/147 (38%), Positives = 77/147 (52%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
               +M+ AL  A  A    EIPVGAV V +NKI++   N +    +  AHAEI+AI+  
Sbjct: 13  NDQKWMAYALSLADKAESFGEIPVGAVIVKDNKIVAEGWNLSIINHNACAHAEIMAIQSA 72

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
            + +    L +  LYVTLEPC MCA A+  ARI+RL YGA + K G   +          
Sbjct: 73  GQKIQNYRLIDCTLYVTLEPCAMCAGALVHARIKRLVYGAGDYKTGAAGSVFNLVQSEQL 132

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H  E+  G+  + S   I  FFK RR
Sbjct: 133 NHQLEVTAGVFAEESATKISAFFKRRR 159


>gi|315037609|ref|YP_004031177.1| cytidine-deoxycytidylate deaminase [Lactobacillus amylovorus GRL
           1112]
 gi|325956088|ref|YP_004286698.1| cytidine-deoxycytidylate deaminase [Lactobacillus acidophilus 30SC]
 gi|312275742|gb|ADQ58382.1| cytidine-deoxycytidylate deaminase [Lactobacillus amylovorus GRL
           1112]
 gi|325332653|gb|ADZ06561.1| cytidine-deoxycytidylate deaminase [Lactobacillus acidophilus 30SC]
          Length = 168

 Score =  214 bits (545), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 53/149 (35%), Positives = 84/149 (56%), Gaps = 1/149 (0%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIR 60
                +M  A+ +A+ A  + E+P+GAV V  + K+I    NR    +D T HAE++AI+
Sbjct: 5   DDKQKYMQLAIAQAKEAEKQGEVPIGAVIVDPDGKVIGTGYNRRELDEDATQHAEMIAIK 64

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
             C+ L    L +  L+VTLEPC MCA AI  +RI+ +Y+GA +PK G   +    +T+ 
Sbjct: 65  EACKNLGMWRLIDCSLFVTLEPCPMCAGAIINSRIKDVYFGALDPKAGACGSVVDLFTVE 124

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H P    G+   +  Q+++DFF+  R
Sbjct: 125 KFNHHPHAIRGLYRDQCAQMLKDFFRAIR 153


>gi|269965211|ref|ZP_06179345.1| zinc-binding domain protein [Vibrio alginolyticus 40B]
 gi|269830197|gb|EEZ84424.1| zinc-binding domain protein [Vibrio alginolyticus 40B]
          Length = 169

 Score =  214 bits (545), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 54/142 (38%), Positives = 76/142 (53%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  A+E A+ A    E+PVGAV V + +II+   NR+    D TAHAEI  +R   + L 
Sbjct: 1   MRRAMELAEQAEAEGEVPVGAVLVKDGEIIAEGWNRSIGTNDATAHAEIQTLRKAGQKLE 60

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
              L +  LYVTLEPC MCA A+  +R++R+ +GA + K G        +     +H   
Sbjct: 61  NYRLLDTTLYVTLEPCPMCAGALLHSRVKRVVFGAPDLKAGAAGTVLNLFESQAAYHYAL 120

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
           +  G+ E   R  +Q FFK RR
Sbjct: 121 VEKGLLEDECRTQLQAFFKRRR 142


>gi|145628165|ref|ZP_01783966.1| preprotein translocase subunit SecA [Haemophilus influenzae
           22.1-21]
 gi|144979940|gb|EDJ89599.1| preprotein translocase subunit SecA [Haemophilus influenzae
           22.1-21]
          Length = 159

 Score =  214 bits (545), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 62/143 (43%), Positives = 81/143 (56%), Gaps = 1/143 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  ALE A  A    EIPVGAV V +   II    N +    D TAHAEI+A+R G + +
Sbjct: 1   MRYALELADKAEALGEIPVGAVLVDDAGNIIGEGWNLSIVQSDPTAHAEIIALRNGAKNI 60

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L    LYVTLEPCTMCA AI  +RI+RL +GAS+ K G I +   F+     +H+ 
Sbjct: 61  QNYRLLNSTLYVTLEPCTMCAGAILHSRIKRLVFGASDYKTGAIGSRFHFFDDYKMNHTL 120

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           EI  G+  +   Q +  FF++RR
Sbjct: 121 EITSGVLAEECSQKLSTFFQKRR 143


>gi|260771319|ref|ZP_05880245.1| tRNA-specific adenosine-34 deaminase [Vibrio furnissii CIP 102972]
 gi|260613635|gb|EEX38828.1| tRNA-specific adenosine-34 deaminase [Vibrio furnissii CIP 102972]
          Length = 189

 Score =  214 bits (545), Expect = 5e-54,   Method: Composition-based stats.
 Identities = 56/147 (38%), Positives = 77/147 (52%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
           +   FM  A+  A+ A    E+PVGAV V +  II+   NR+    D TAHAEI  +R  
Sbjct: 11  EDEQFMRRAMALAEQAEAEGEVPVGAVLVKDGHIIAEGWNRSIGACDATAHAEIQVLRQA 70

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
              L    L E  LYVTLEPC MCA A+  +R++R+ YGA + K G        ++    
Sbjct: 71  GEALHNYRLLETTLYVTLEPCPMCAGALLHSRVKRIVYGAPDLKAGAAGTVLDLFSSQAA 130

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H   +  G+ E   RQ +Q FF+ RR
Sbjct: 131 YHYATVEKGLLEDECRQQLQAFFQRRR 157


>gi|332534515|ref|ZP_08410352.1| tRNA-specific adenosine-34 deaminase [Pseudoalteromonas
           haloplanktis ANT/505]
 gi|332036083|gb|EGI72560.1| tRNA-specific adenosine-34 deaminase [Pseudoalteromonas
           haloplanktis ANT/505]
          Length = 171

 Score =  213 bits (544), Expect = 5e-54,   Method: Composition-based stats.
 Identities = 56/147 (38%), Positives = 85/147 (57%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
             + +M  AL  A+ A L +EIPVGA+ V +N++IS   NR+    D +AHAE++A+R  
Sbjct: 6   NDSYWMEQALLYAKQAELLDEIPVGAIVVKDNQLISVGYNRSITDNDPSAHAEMIAVREA 65

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
            ++L+   L +  LYVTLEPC+MCA  +  +RI+RL +GA + K G   +          
Sbjct: 66  GKVLNNYRLIDCTLYVTLEPCSMCAGLLVHSRIKRLVFGALDAKTGSAGSIMNLLQEPRL 125

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H  E+  G+  Q+    I +FFK RR
Sbjct: 126 NHQVEVCGGVLAQQCGDTISNFFKRRR 152


>gi|227891209|ref|ZP_04009014.1| nucleoside deaminase [Lactobacillus salivarius ATCC 11741]
 gi|227867083|gb|EEJ74504.1| nucleoside deaminase [Lactobacillus salivarius ATCC 11741]
          Length = 169

 Score =  213 bits (544), Expect = 6e-54,   Method: Composition-based stats.
 Identities = 54/140 (38%), Positives = 75/140 (53%)

Query: 6   VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
            FM  AL EA+ AA   E+P+G V V + KII R  N     ++ T HAE+LAI      
Sbjct: 13  KFMKEALFEAKLAAKIGEVPIGCVIVKDGKIIGRGHNLREHSQNATLHAEMLAIEEANET 72

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           ++   L +  L+VTLEPC MC+ AI  +RI  +YYGAS+ K G +         +  +H 
Sbjct: 73  VNSWRLVDTQLFVTLEPCPMCSGAIINSRIPEVYYGASDSKAGTVGTLMNLLEDSRFNHQ 132

Query: 126 PEIYPGISEQRSRQIIQDFF 145
             +  GI E     I++DFF
Sbjct: 133 SFVEKGILENECASILKDFF 152


>gi|116491396|ref|YP_810940.1| tRNA-adenosine deaminase [Oenococcus oeni PSU-1]
 gi|116092121|gb|ABJ57275.1| tRNA-adenosine deaminase [Oenococcus oeni PSU-1]
          Length = 156

 Score =  213 bits (544), Expect = 6e-54,   Method: Composition-based stats.
 Identities = 57/145 (39%), Positives = 85/145 (58%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
             FM  AL++AQ A    E+P+GAV V +N++I+   NR  +    TAHAE L I     
Sbjct: 9   EEFMQLALKQAQTAFDEGEVPIGAVLVKDNQVIAADHNRKEQSGIATAHAEKLVIEGANC 68

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
            L    L +  L+VT+EPC MC  AI  +RI RL+YGA++PK GG+ +       +  +H
Sbjct: 69  SLGDWRLNDCSLFVTIEPCVMCCGAIIQSRIPRLFYGAADPKFGGVSSLYHLLEDSRSNH 128

Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149
             E+YP +  ++S  ++QDFF++ R
Sbjct: 129 FVEVYPDVLAKQSANLMQDFFRKLR 153


>gi|315173580|gb|EFU17597.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Enterococcus faecalis TX1346]
          Length = 173

 Score =  213 bits (544), Expect = 6e-54,   Method: Composition-based stats.
 Identities = 56/148 (37%), Positives = 82/148 (55%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           ++   FM  A+ EA+ A   +E+P+GAV V   +II R  N     ++ TAHAE+ AI+ 
Sbjct: 11  EEKEFFMREAIAEAKKAEGLDEVPIGAVIVRQGEIIGRGHNLREARQEATAHAEMYAIQE 70

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
            CR +    L E  L+VTLEPC MC+ A+ LARI  +YYGA++PK G             
Sbjct: 71  ACRGIENWRLEETQLFVTLEPCPMCSGAMLLARIPEVYYGATDPKAGTAGTLMNLLEDER 130

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H   +  G+ E+  R ++  FFK+ R
Sbjct: 131 FNHVAYVEAGVLEEECRLLLVQFFKKLR 158


>gi|239623044|ref|ZP_04666075.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
 gi|239522411|gb|EEQ62277.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
          Length = 202

 Score =  213 bits (544), Expect = 6e-54,   Method: Composition-based stats.
 Identities = 49/146 (33%), Positives = 76/146 (52%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
              FM  A+ +A  AA   ++P+G V V   +II+R  NR    K V +HAEI++I+  C
Sbjct: 54  DEGFMGEAIRQAHKAAALGDVPIGCVIVRQGQIIARGYNRRNADKSVLSHAEIISIKRAC 113

Query: 64  RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123
           + L    L +  +YVTLEPC MC+ AI  ARI R+  G  N K G   +          +
Sbjct: 114 KKLGDWRLEDCTMYVTLEPCPMCSGAIVQARIPRVVIGCMNAKAGCAGSVLDLLHEPGFN 173

Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149
           H  +   G+  +    ++++FF++ R
Sbjct: 174 HQVDTRAGVLGEECSGMMKEFFRKIR 199


>gi|221195061|ref|ZP_03568117.1| tRNA-specific adenosine deaminase [Atopobium rimae ATCC 49626]
 gi|221184964|gb|EEE17355.1| tRNA-specific adenosine deaminase [Atopobium rimae ATCC 49626]
          Length = 198

 Score =  213 bits (544), Expect = 6e-54,   Method: Composition-based stats.
 Identities = 52/147 (35%), Positives = 79/147 (53%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
           +   +M  AL EA  AA   E+P+GAV V + ++I+ A NR       +AHAE LA+   
Sbjct: 43  RDEKYMRLALSEAAAAAAEGEVPIGAVVVCDGEVIASAHNRREVDNSPSAHAEFLAMEEA 102

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
            R+L +  L    +YVTLEPC MCA  +  +RI R  +GA +PKGG +         +  
Sbjct: 103 SRVLKRWRLTGCTVYVTLEPCLMCAGLMVNSRIDRCVFGACDPKGGALGTLYDVSCDSRL 162

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H  ++  G+    +   ++ FF+ERR
Sbjct: 163 NHEFQVTSGVLANEAAAQLKAFFRERR 189


>gi|293552936|ref|ZP_06673591.1| tRNA-specific adenosine deaminase [Enterococcus faecium E1039]
 gi|291602912|gb|EFF33109.1| tRNA-specific adenosine deaminase [Enterococcus faecium E1039]
          Length = 171

 Score =  213 bits (544), Expect = 6e-54,   Method: Composition-based stats.
 Identities = 53/141 (37%), Positives = 78/141 (55%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
             +M  AL EA+ A + +E+P+GAV VL+ K++ R  N     +D T HAE+LAI+  C 
Sbjct: 12  EKWMRLALAEAKKAEMLHEVPIGAVVVLDGKVVGRGYNLRETTQDATTHAEMLAIKEACE 71

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
            +    L +  L+VTLEPC MC+ A+ L+R+  +Y+GA +PKGG              +H
Sbjct: 72  KVGSWRLEDAALFVTLEPCPMCSGAMILSRVAEVYFGAYDPKGGTAGTLMNLLEDERFNH 131

Query: 125 SPEIYPGISEQRSRQIIQDFF 145
              +  GI E     I+ DFF
Sbjct: 132 QAYVEGGILEDECGMILTDFF 152


>gi|113867903|ref|YP_726392.1| cytosine deaminase [Ralstonia eutropha H16]
 gi|113526679|emb|CAJ93024.1| cytosine deaminase [Ralstonia eutropha H16]
          Length = 200

 Score =  213 bits (544), Expect = 7e-54,   Method: Composition-based stats.
 Identities = 56/144 (38%), Positives = 84/144 (58%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           ++   +M  ALEEA+ A    E+PVGAV V N+ II+R  N      D +AHAE+ A+R 
Sbjct: 24  ERDARYMRAALEEARLAEAAGEVPVGAVVVWNDTIIARGHNLPIRSVDPSAHAEMQALRA 83

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
             +++    +PE +LYVTLEPC MC+ AI  AR+R + +GA++PK G   +    +  A 
Sbjct: 84  AAQVIGNYRMPECELYVTLEPCVMCSGAILHARLRHVVFGAADPKTGAAGSVLNLFEQAQ 143

Query: 122 CHHSPEIYPGISEQRSRQIIQDFF 145
            +H   I  G+      Q+++DFF
Sbjct: 144 LNHQTTIAGGVLADTCGQMLKDFF 167


>gi|94969013|ref|YP_591061.1| tRNA-adenosine deaminase [Candidatus Koribacter versatilis
           Ellin345]
 gi|94551063|gb|ABF40987.1| tRNA-adenosine deaminase [Candidatus Koribacter versatilis
           Ellin345]
          Length = 152

 Score =  213 bits (544), Expect = 7e-54,   Method: Composition-based stats.
 Identities = 65/147 (44%), Positives = 87/147 (59%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
              +FM  AL EA  A    E+P+GAV V  +KII R  NR     D TAHAEI+AIR  
Sbjct: 2   SDELFMEEALREAARAQASGEVPIGAVVVYQDKIIGRGWNRPAFECDPTAHAEIIAIREA 61

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
            R L    L + +L+VTLEPC MCA AI+ ARIRRL Y A +PK G +++  Q       
Sbjct: 62  GRELGNYRLTDCELFVTLEPCAMCAGAITHARIRRLIYAADDPKAGAVKSALQVLNHPAL 121

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H  EI  G+   R+ +++Q FF+++R
Sbjct: 122 NHQVEITSGVLAGRAMEMLQAFFRDKR 148


>gi|326203924|ref|ZP_08193786.1| CMP/dCMP deaminase zinc-binding [Clostridium papyrosolvens DSM
           2782]
 gi|325986022|gb|EGD46856.1| CMP/dCMP deaminase zinc-binding [Clostridium papyrosolvens DSM
           2782]
          Length = 151

 Score =  213 bits (543), Expect = 7e-54,   Method: Composition-based stats.
 Identities = 52/148 (35%), Positives = 83/148 (56%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
            +   FM  A+++A+ A  + E PVGA+ V + ++I+   N+  E +DVT+HAEI A++ 
Sbjct: 3   TRNEQFMQEAIKQAKEAYAKGESPVGAIVVKDGELIASGCNQKEEKQDVTSHAEIEALKK 62

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
             + L    L   D+YVTLEPC MCA AI  +RI+ LY GA + K G   +    + +  
Sbjct: 63  AAKKLGTWRLDGCDMYVTLEPCAMCAGAIIQSRIKTLYIGAMDKKAGAAGSVIDLFRVPQ 122

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H  ++  G+  +    I+ +FFK  R
Sbjct: 123 FNHRVDVVYGLMFEECGNILTEFFKRLR 150


>gi|325270697|ref|ZP_08137293.1| tRNA-specific adenosine deaminase [Prevotella multiformis DSM
           16608]
 gi|324986992|gb|EGC18979.1| tRNA-specific adenosine deaminase [Prevotella multiformis DSM
           16608]
          Length = 199

 Score =  213 bits (543), Expect = 7e-54,   Method: Composition-based stats.
 Identities = 67/149 (44%), Positives = 87/149 (58%), Gaps = 5/149 (3%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           MKK   +M  AL EA+ A    EIPVGAV V  ++II+RA N    L DVTAHAE+ AI 
Sbjct: 56  MKKDLYYMRQALAEAEAAYREGEIPVGAVVVCRDRIIARAHNLTETLNDVTAHAEMQAIT 115

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
           M    L  + L +  LYVTLEPCTMCA AI  A++RR+ YG  + K G      + Y   
Sbjct: 116 MAASGLGGKYLQDCTLYVTLEPCTMCAGAIGWAQLRRMVYGCPDEKRG-----YRLYAPR 170

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             H   E+  G+ E+  + ++Q FF+ERR
Sbjct: 171 ALHPRAEVVCGVMEEECKALMQRFFRERR 199


>gi|145641906|ref|ZP_01797480.1| preprotein translocase subunit SecA [Haemophilus influenzae R3021]
 gi|145273385|gb|EDK13257.1| preprotein translocase subunit SecA [Haemophilus influenzae
           22.4-21]
          Length = 147

 Score =  213 bits (543), Expect = 7e-54,   Method: Composition-based stats.
 Identities = 60/143 (41%), Positives = 79/143 (55%), Gaps = 1/143 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  AL  A  A    EIPVGAV V +   II    N +    D TAHAEI+A+R G + +
Sbjct: 1   MRYALTLADKAEALGEIPVGAVLVDDSGNIIGEGWNLSIVQNDPTAHAEIIALRNGAKNI 60

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L    LYVTLEPCTMCA AI  +RI+RL +G S+ K G I +   F+     +H+ 
Sbjct: 61  QNYRLLNTTLYVTLEPCTMCAGAILHSRIKRLVFGTSDYKTGAIGSRFHFFDDYKMNHTL 120

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           EI  G+  +   Q +  FF++RR
Sbjct: 121 EITSGVLAEECSQKLSTFFQKRR 143


>gi|167623310|ref|YP_001673604.1| zinc-binding CMP/dCMP deaminase [Shewanella halifaxensis HAW-EB4]
 gi|167353332|gb|ABZ75945.1| CMP/dCMP deaminase zinc-binding [Shewanella halifaxensis HAW-EB4]
          Length = 163

 Score =  213 bits (543), Expect = 8e-54,   Method: Composition-based stats.
 Identities = 52/142 (36%), Positives = 76/142 (53%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  A++ A  A  + E+PVGAV V + +++S   N +  L D +AHAE+  +R   +I+ 
Sbjct: 1   MKMAMDMAIKAEEKGEVPVGAVLVKDGEVLSAGFNFSIGLHDPSAHAEMQCLRQAGQIMQ 60

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
              L +  LYVTLEPC MCA AI  +RI RL +GA + K G           +  +H  E
Sbjct: 61  NYRLLDTTLYVTLEPCAMCAGAIVHSRIGRLVFGAKDEKTGAAGTVIDIVRHSAFNHQVE 120

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
           +  G+ E    + +  FFK RR
Sbjct: 121 VSSGVLESECSEQLSAFFKRRR 142


>gi|294102217|ref|YP_003554075.1| CMP/dCMP deaminase zinc-binding protein [Aminobacterium colombiense
           DSM 12261]
 gi|293617197|gb|ADE57351.1| CMP/dCMP deaminase zinc-binding protein [Aminobacterium colombiense
           DSM 12261]
          Length = 156

 Score =  213 bits (543), Expect = 8e-54,   Method: Composition-based stats.
 Identities = 61/148 (41%), Positives = 84/148 (56%), Gaps = 2/148 (1%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
                FM+ AL+EA+ AA   E+PV A+ V NN++I +  N   +  D TAHAEI+AIR 
Sbjct: 5   DTDIFFMNMALDEARKAAEHGEVPVAALVVRNNEVIGKGSNS--KHLDPTAHAEIIAIRE 62

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
               L    L    LYVTLEPC MCA AI L+RI+ L YGA++P+ G           + 
Sbjct: 63  ATERLGTWNLRGSTLYVTLEPCPMCAGAIVLSRIKCLVYGAADPRAGACGTLYNIVQDSR 122

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H  E+  G+  Q S  ++ D+FK+RR
Sbjct: 123 LNHRCEVIKGVLAQESANLLWDYFKKRR 150


>gi|312884996|ref|ZP_07744685.1| tRNA-specific adenosine deaminase [Vibrio caribbenthicus ATCC
           BAA-2122]
 gi|309367328|gb|EFP94891.1| tRNA-specific adenosine deaminase [Vibrio caribbenthicus ATCC
           BAA-2122]
          Length = 156

 Score =  213 bits (543), Expect = 8e-54,   Method: Composition-based stats.
 Identities = 55/142 (38%), Positives = 79/142 (55%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  A+E A  A    E+PVGA+ V + +II+   NR+    D TAHAEI  +R   +IL 
Sbjct: 1   MRRAIELAHKAEQEGEVPVGALLVKDGEIIAEGWNRSISTHDATAHAEIEVLRKAGKILE 60

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
              L +  LYVTLEPC MCA A+  +R++R+ +GA + K G   +    +     +H  +
Sbjct: 61  NYRLNDTTLYVTLEPCPMCAGALLHSRVKRIVFGAFDKKTGAAGSVLNLFEHQAAYHYAD 120

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
           I  G+ E + R  +Q FFK RR
Sbjct: 121 IEKGVLEHQCRTQLQSFFKRRR 142


>gi|227903275|ref|ZP_04021080.1| nucleoside deaminase [Lactobacillus acidophilus ATCC 4796]
 gi|227869080|gb|EEJ76501.1| nucleoside deaminase [Lactobacillus acidophilus ATCC 4796]
          Length = 231

 Score =  213 bits (543), Expect = 8e-54,   Method: Composition-based stats.
 Identities = 53/144 (36%), Positives = 83/144 (57%), Gaps = 1/144 (0%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           +M  A+++A+ A  + E+P+GAV V    KII    NR    +D T HAE++AI+  C+ 
Sbjct: 73  YMQLAIDKAKEAEKQGEVPIGAVVVDPTGKIIGTGYNRRELDEDSTQHAEMIAIKEACKN 132

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           L    L +  L+VTLEPC MCA AI  +RI+ +Y+GA +PK G   +    + +   +H 
Sbjct: 133 LGMWRLIDCSLFVTLEPCPMCAGAIINSRIKDVYFGALDPKAGACGSVVDLFAVERFNHH 192

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
           P    G+   +  Q+++DFF+  R
Sbjct: 193 PHAIRGLYRDQCAQMLKDFFRAIR 216


>gi|145629986|ref|ZP_01785768.1| hypothetical protein CGSHi22421_08043 [Haemophilus influenzae
           R3021]
 gi|144984267|gb|EDJ91690.1| hypothetical protein CGSHi22421_08043 [Haemophilus influenzae
           R3021]
          Length = 159

 Score =  213 bits (543), Expect = 8e-54,   Method: Composition-based stats.
 Identities = 62/143 (43%), Positives = 82/143 (57%), Gaps = 1/143 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  ALE A  A +  EIPVGAV V +   II    N +    D TAHAEI+A+R G + +
Sbjct: 1   MRYALELADKAEVLGEIPVGAVLVDDAGNIIGEGWNLSIVQSDPTAHAEIIALRNGAKNI 60

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L    LYVTLEPCTMCA AI  +RI+RL +GAS+ K G I +   F+     +H+ 
Sbjct: 61  QNYRLLNSTLYVTLEPCTMCAGAILHSRIKRLVFGASDYKTGAIGSRFHFFDDYKMNHTL 120

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           EI  G+  +   Q +  FF++RR
Sbjct: 121 EITSGVLAEECSQKLSTFFQKRR 143


>gi|32477503|ref|NP_870497.1| cytosine deaminase [Rhodopirellula baltica SH 1]
 gi|32448057|emb|CAD77574.1| cytosine deaminase [Rhodopirellula baltica SH 1]
 gi|327542170|gb|EGF28663.1| CMP/dCMP deaminase zinc-binding protein [Rhodopirellula baltica
           WH47]
          Length = 159

 Score =  213 bits (543), Expect = 8e-54,   Method: Composition-based stats.
 Identities = 57/146 (39%), Positives = 86/146 (58%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
              +M  A+E AQ+AAL +E+PVGA+ V +   I+ A N+   L D TAHAE++AI    
Sbjct: 9   DRHWMQRAIEMAQSAALEDEVPVGAIIVRSGTAIAAAANQREALHDPTAHAEMIAITQAA 68

Query: 64  RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123
             +    L +  LYVTLEPC MCA AI  AR+ R+ +GAS+PK G + +  +  T +  +
Sbjct: 69  ASIENWRLEQTTLYVTLEPCLMCAGAILQARVPRVVFGASDPKAGAVTSLYEVLTDSRLN 128

Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149
           H  EI  G+  ++   ++ +FF  +R
Sbjct: 129 HRCEITHGVMAEQCGHLLTEFFSAKR 154


>gi|332686456|ref|YP_004456230.1| tRNA-specific adenosine-34 deaminase [Melissococcus plutonius ATCC
           35311]
 gi|332370465|dbj|BAK21421.1| tRNA-specific adenosine-34 deaminase [Melissococcus plutonius ATCC
           35311]
          Length = 163

 Score =  213 bits (543), Expect = 9e-54,   Method: Composition-based stats.
 Identities = 61/148 (41%), Positives = 86/148 (58%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
            +   FM+ AL EA+ A    E+P+GAV V   +II+R  N   +++  TAHAEILAI  
Sbjct: 7   SEKKFFMNEALTEAKKAEKLGEVPIGAVVVYQKQIIARGYNLREKIQKATAHAEILAINE 66

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
            C  L+   L E  L+VTLEPC+MC+ A+ LARI  +YYGA +PKGG           + 
Sbjct: 67  ACTFLNSWRLEETRLFVTLEPCSMCSGAMLLARIPEVYYGAKDPKGGAAGTLINLLADSR 126

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H  +   G+ E+   QI+ +FFK+ R
Sbjct: 127 FNHVAKTESGVLEEPCSQILTNFFKQLR 154


>gi|24378807|ref|NP_720762.1| putative deaminase [Streptococcus mutans UA159]
 gi|24376681|gb|AAN58068.1|AE014879_5 putative deaminase [Streptococcus mutans UA159]
          Length = 156

 Score =  213 bits (543), Expect = 9e-54,   Method: Composition-based stats.
 Identities = 58/145 (40%), Positives = 78/145 (53%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
             FM  AL+EAQ +  + EIP+G V V + +II    N   E      HAEI+AI    R
Sbjct: 10  EFFMGEALKEAQLSLQKEEIPIGCVIVKDGQIIGCGHNAREEENLAIMHAEIMAINQANR 69

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
                 L +  L+VT+EPC MC+ AI LARI ++ YGA N K GG  +     T    +H
Sbjct: 70  TQESWRLLDCTLFVTIEPCIMCSGAIGLARIPQVIYGAKNAKFGGAGSLYDILTDERLNH 129

Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149
             E+  GI E+   Q++Q FF+ RR
Sbjct: 130 RVEVERGILEKECAQMMQSFFRYRR 154


>gi|312279157|gb|ADQ63814.1| Cytidine/deoxycytidylate deaminase family protein, putative
           [Streptococcus thermophilus ND03]
          Length = 172

 Score =  212 bits (542), Expect = 9e-54,   Method: Composition-based stats.
 Identities = 57/148 (38%), Positives = 85/148 (57%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           ++  +FMS AL+EAQ +  + EIP+G V V + +I+ R  N   EL     HAE++AI+ 
Sbjct: 7   EEKEIFMSEALKEAQKSLDKAEIPIGCVIVKDKEIVGRGHNAREELNQAIMHAEVMAIQE 66

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
             R +    L +  L+VT+EPC MC+ AI LARI ++ YGA N K GG  +         
Sbjct: 67  ANRTVGNWRLLDCTLFVTIEPCVMCSGAIGLARIPKVIYGACNQKFGGAGSLYDILRDER 126

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H  E+  G+ E    +I+QDFF++ R
Sbjct: 127 LNHRVEVETGVMEADCAKIMQDFFRQSR 154


>gi|16272843|ref|NP_439066.1| hypothetical protein HI0906 [Haemophilus influenzae Rd KW20]
 gi|260579996|ref|ZP_05847826.1| ComE operon protein 2 [Haemophilus influenzae RdAW]
 gi|1175980|sp|P44931|TADA_HAEIN RecName: Full=tRNA-specific adenosine deaminase
 gi|1573925|gb|AAC22565.1| conserved hypothetical protein [Haemophilus influenzae Rd KW20]
 gi|260093280|gb|EEW77213.1| ComE operon protein 2 [Haemophilus influenzae RdAW]
          Length = 173

 Score =  212 bits (542), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 61/147 (41%), Positives = 82/147 (55%), Gaps = 1/147 (0%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNK-IISRAGNRNRELKDVTAHAEILAIRMG 62
               M  ALE A  A    EIPVGAV V + + II    N +    D TAHAEI+A+R G
Sbjct: 11  DEKMMRYALELADKAEALGEIPVGAVLVDDARNIIGEGWNLSIVQSDPTAHAEIIALRNG 70

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
            + +    L    LYVTLEPCTMCA AI  +RI+RL +GAS+ K G I +   F+     
Sbjct: 71  AKNIQNYRLLNSTLYVTLEPCTMCAGAILHSRIKRLVFGASDYKTGAIGSRFHFFDDYKM 130

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H+ E+  G+  +   Q +  FF++RR
Sbjct: 131 NHTLEVTSGVLAEECSQKLSTFFQKRR 157


>gi|89053709|ref|YP_509160.1| CMP/dCMP deaminase, zinc-binding [Jannaschia sp. CCS1]
 gi|88863258|gb|ABD54135.1| CMP/dCMP deaminase zinc-binding protein [Jannaschia sp. CCS1]
          Length = 142

 Score =  212 bits (542), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 79/142 (55%), Positives = 96/142 (67%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  AL++A+ AA R E+PVGAV   N +II+RAGNR RE  D T HAEILAIR  C  L 
Sbjct: 1   MEAALDQARQAAARGEVPVGAVISRNGEIIARAGNRTREDHDPTGHAEILAIRSACAALQ 60

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
            E LP  DL+VTLEPC  CAA IS ARIRRLYY A +PK GGI  G + +T    HH PE
Sbjct: 61  SERLPGCDLWVTLEPCPACAATISAARIRRLYYAAPDPKSGGIAQGPRIFTHPQAHHVPE 120

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
           IY G+ E+ +  +++DFF  +R
Sbjct: 121 IYTGLLEEEAATLLRDFFAGKR 142


>gi|117617810|ref|YP_857319.1| tRNA-specific adenosine deaminase [Aeromonas hydrophila subsp.
           hydrophila ATCC 7966]
 gi|117559217|gb|ABK36165.1| tRNA-specific adenosine deaminase [Aeromonas hydrophila subsp.
           hydrophila ATCC 7966]
          Length = 179

 Score =  212 bits (542), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 52/148 (35%), Positives = 76/148 (51%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           ++   +M  A+  A  A    EIPVGAV VL  +++    NR+    D  AHAE++AIR 
Sbjct: 14  EQDERWMRHAMALAARAEGIGEIPVGAVLVLGGEVVGEGWNRSISEHDACAHAEVMAIRA 73

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
               L    L +  LYVTLEPC MCA A+  +R++R+ YGA + K G   +  +      
Sbjct: 74  AGVRLQNYRLLDTTLYVTLEPCCMCAGALIHSRVKRVVYGARDLKTGAAGSVFEILQDPR 133

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H  E+  G+        + DFF+ RR
Sbjct: 134 HNHGVELTGGVLADACSAQLSDFFRRRR 161


>gi|146308436|ref|YP_001188901.1| CMP/dCMP deaminase, zinc-binding [Pseudomonas mendocina ymp]
 gi|145576637|gb|ABP86169.1| CMP/dCMP deaminase, zinc-binding protein [Pseudomonas mendocina
           ymp]
          Length = 158

 Score =  212 bits (542), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 56/148 (37%), Positives = 83/148 (56%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
            +   FM  AL +A+  A + E+PVGAV V + +++ +  N      D +AHAE++AIR 
Sbjct: 10  SRDEHFMRLALVQARLGAEQGEVPVGAVLVQDGEVVGQGFNCPILRHDPSAHAEMVAIRA 69

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
             + +    LP   LYVTLEPC+MCA  I  ARI R+ Y AS P+ G   +  QF+    
Sbjct: 70  AAQSVQNYRLPGSTLYVTLEPCSMCAGLIVHARIARVVYAASEPRAGVAISQGQFFDQGF 129

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H   +  G+  + S  +++DFFK RR
Sbjct: 130 LNHRVLVEGGLLAEESGALLKDFFKARR 157


>gi|326553676|gb|ADZ88315.1| cytidine and deoxycytidylate deaminase family protein [Brucella
           melitensis M5-90]
          Length = 142

 Score =  212 bits (542), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 93/142 (65%), Positives = 110/142 (77%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  ALEEA  A  R E+P+GAV V + +II+RAGNR RE  DVTAHAEIL IR    +L 
Sbjct: 1   MDIALEEAHAAGERGEVPIGAVIVRDGEIIARAGNRTREFNDVTAHAEILTIRQAGEMLG 60

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
            E L + DLYVTLEPC MCAAAIS ARIRRLYYGAS+PKGGGIE+G +FYT  TCHH+PE
Sbjct: 61  SERLIDCDLYVTLEPCAMCAAAISFARIRRLYYGASDPKGGGIEHGGRFYTQLTCHHAPE 120

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
           IYPG  E  +R+I++DFF+E+R
Sbjct: 121 IYPGFCEADARKILKDFFREKR 142


>gi|322514212|ref|ZP_08067274.1| tRNA-specific adenosine deaminase [Actinobacillus ureae ATCC 25976]
 gi|322119905|gb|EFX91914.1| tRNA-specific adenosine deaminase [Actinobacillus ureae ATCC 25976]
          Length = 196

 Score =  212 bits (542), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 60/148 (40%), Positives = 81/148 (54%), Gaps = 1/148 (0%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRM 61
           +   FM  AL  A  A   +EIPVGAV +  +  II    N+  +L D +AHAE+LAIR 
Sbjct: 39  QDIHFMQYALALADRAEAIDEIPVGAVLIDSDGNIIGEGWNQVIQLADPSAHAEMLAIRQ 98

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
             ++ +   L    LYVTLEPCTMCA AI  +R+ RL +GAS+ K G I +    +    
Sbjct: 99  AGKVQNNYRLLGCTLYVTLEPCTMCAGAILHSRLHRLVFGASDYKTGAIGSRFHLFEDYK 158

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H  EI  G+  +   Q I  FF+ RR
Sbjct: 159 MNHFLEIRGGVLAEDCSQKISRFFQRRR 186


>gi|254442522|ref|ZP_05055998.1| Cytidine and deoxycytidylate deaminase zinc-binding region domain
           protein [Verrucomicrobiae bacterium DG1235]
 gi|198256830|gb|EDY81138.1| Cytidine and deoxycytidylate deaminase zinc-binding region domain
           protein [Verrucomicrobiae bacterium DG1235]
          Length = 177

 Score =  212 bits (541), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 50/148 (33%), Positives = 77/148 (52%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           +    +M  A  +A  A   NE+P+GAV     +++  A NR     D TAHAE+LAI  
Sbjct: 23  RNDRYYMELAYNQAIEAWRENEVPIGAVIEYKGEVVGSAHNRVESTNDPTAHAEMLAITQ 82

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
               +    L E  LYVT EPC MC+ A  ++R++R+ Y   +PK GG+       +  T
Sbjct: 83  ASSAIKNWRLNEATLYVTKEPCPMCSGASMMSRLKRVVYAVPDPKMGGLGGLYDVNSYPT 142

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +HS E+  G+      +++Q FF+ +R
Sbjct: 143 INHSLEVEIGVLRDDCLELLQAFFQLKR 170


>gi|110833682|ref|YP_692541.1| cytidine/deoxycytidylate deaminase family protein [Alcanivorax
           borkumensis SK2]
 gi|110646793|emb|CAL16269.1| cytidine/deoxycytidylate deaminase family protein [Alcanivorax
           borkumensis SK2]
          Length = 152

 Score =  212 bits (541), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 55/147 (37%), Positives = 81/147 (55%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
               +M  AL  A+ AA + E+PVGA+ V   +++ +  N+     D +AHAEI+A+R  
Sbjct: 2   DDQDWMQQALMLARQAADQGEVPVGALVVRGGQLLGQGYNQPITANDPSAHAEIIAMRSA 61

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
                   L    LYVTLEPCTMC  A+  ARI RL YGAS P+ G  E+  Q  ++   
Sbjct: 62  SLAEKNYRLSGCTLYVTLEPCTMCFGAMVHARIGRLVYGASEPRAGVCESQLQLPSVDFY 121

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H  E+  G+  + S  +++ FF +RR
Sbjct: 122 NHRVEVEKGVLAEESAMLLKRFFADRR 148


>gi|317503805|ref|ZP_07961817.1| cytosine deaminase [Prevotella salivae DSM 15606]
 gi|315665102|gb|EFV04757.1| cytosine deaminase [Prevotella salivae DSM 15606]
          Length = 148

 Score =  212 bits (541), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 71/148 (47%), Positives = 89/148 (60%), Gaps = 5/148 (3%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
            K   FM  AL EAQ AA   EIP+GAV V N++IISRA N   +L DVTAHAE+ AI  
Sbjct: 6   DKDEQFMRKALYEAQRAAEEGEIPIGAVIVCNDRIISRAHNLTEKLHDVTAHAEMQAITA 65

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
              +L  + L +  LYVT+EPC MCA AI  A+I R+ YGAS+ K G      QFY    
Sbjct: 66  AADLLGGKYLSDCTLYVTVEPCVMCAGAIGWAQIGRIVYGASDEKRG-----YQFYAPRA 120

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            H    +  G+ E   RQ++QDFFK++R
Sbjct: 121 LHPKAVVTRGVLEAECRQMMQDFFKQKR 148


>gi|304393183|ref|ZP_07375111.1| tRNA-specific adenosine deaminase [Ahrensia sp. R2A130]
 gi|303294190|gb|EFL88562.1| tRNA-specific adenosine deaminase [Ahrensia sp. R2A130]
          Length = 153

 Score =  212 bits (541), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 77/153 (50%), Positives = 103/153 (67%), Gaps = 4/153 (2%)

Query: 1   MKKGNV----FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56
           M K N     FM  AL EA+ AA R E+PVGAV V + +++++AGNR  EL D +AHAE+
Sbjct: 1   MTKDNYDVASFMEQALVEARAAAERGEVPVGAVLVRDGEVVAKAGNRTLELHDPSAHAEL 60

Query: 57  LAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116
           L IR  C     + LP+ DLYVTLEPCT+CA AIS ARIRR+Y+ A + KGG + NG +F
Sbjct: 61  LVIRQACAAAKSQRLPDCDLYVTLEPCTLCATAISFARIRRVYFAADDAKGGAVTNGVRF 120

Query: 117 YTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
           +   TCHH PE+Y G+ E  + ++++ FF  RR
Sbjct: 121 FDQPTCHHEPEVYSGMCEVEAGELLRSFFAARR 153


>gi|153010358|ref|YP_001371572.1| CMP/dCMP deaminase zinc-binding [Ochrobactrum anthropi ATCC 49188]
 gi|151562246|gb|ABS15743.1| CMP/dCMP deaminase zinc-binding [Ochrobactrum anthropi ATCC 49188]
          Length = 173

 Score =  212 bits (541), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 89/142 (62%), Positives = 107/142 (75%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  AL EA+ A  R E+P+GAV V    II+RAGNR RE  DVTAHAE+LAIR   + L 
Sbjct: 32  MEIALAEARAAGSRGEVPIGAVIVHQGTIIARAGNRTREFNDVTAHAEVLAIREAGKALQ 91

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
            E L + DLYVTLEPC MCA AIS ARIRRLYYGAS+PKGGG+E+G +FYT  TCHH PE
Sbjct: 92  SERLVDCDLYVTLEPCAMCATAISFARIRRLYYGASDPKGGGVEHGPRFYTQPTCHHVPE 151

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
           IY G SE  S++I++DFF+++R
Sbjct: 152 IYAGFSEGDSQKILRDFFRDKR 173


>gi|290581189|ref|YP_003485581.1| putative deaminase [Streptococcus mutans NN2025]
 gi|254998088|dbj|BAH88689.1| putative deaminase [Streptococcus mutans NN2025]
          Length = 156

 Score =  212 bits (541), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 58/147 (39%), Positives = 79/147 (53%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
           +   FM  AL+EAQ +  + EIP+G V V + +II    N   E      HAEI+AI   
Sbjct: 8   EKEFFMGEALKEAQLSLQKEEIPIGCVIVKDGQIIGCGHNAREEENLAIMHAEIMAINQA 67

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
            R      L +  L+VT+EPC MC+ AI LARI ++ YGA N K GG  +     T    
Sbjct: 68  NRTQESWRLLDCTLFVTIEPCIMCSGAIGLARIPQVIYGAKNAKFGGAGSLYDILTDERL 127

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H  E+  GI E+   Q++Q FF+ RR
Sbjct: 128 NHRVEVERGILEKECAQMMQSFFRYRR 154


>gi|170725917|ref|YP_001759943.1| zinc-binding CMP/dCMP deaminase [Shewanella woodyi ATCC 51908]
 gi|169811264|gb|ACA85848.1| CMP/dCMP deaminase zinc-binding [Shewanella woodyi ATCC 51908]
          Length = 169

 Score =  212 bits (541), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 49/148 (33%), Positives = 79/148 (53%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           ++   +M  A++ A  A  + E+PVGA+ V N+++IS   N      D +AHAE+  +R 
Sbjct: 5   ERDIHYMKLAMDMAAKAEEKGEVPVGAILVKNDEVISAGFNFCIGSHDPSAHAEMQCLRQ 64

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
             +++    L +  LYVTLEPC MCA A+  +R+ RL +GAS+ K G           + 
Sbjct: 65  AGKVIENYRLLDTTLYVTLEPCAMCAGAMVHSRVSRLVFGASDAKTGAAGTVIDLVRHSA 124

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H  E+  G+ E    + +  FF+ RR
Sbjct: 125 FNHQLEVTQGVLELECAEQLSQFFRRRR 152


>gi|124266938|ref|YP_001020942.1| tRNA-adenosine deaminase [Methylibium petroleiphilum PM1]
 gi|124259713|gb|ABM94707.1| tRNA-adenosine deaminase [Methylibium petroleiphilum PM1]
          Length = 205

 Score =  212 bits (541), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 55/148 (37%), Positives = 84/148 (56%), Gaps = 4/148 (2%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVL--NN--KIISRAGNRNRELKDVTAHAEIL 57
           +K    M  AL++AQNA L  E+PVGAV V   +   ++++   NR     D TAHAEI+
Sbjct: 9   RKDEAAMRLALDQAQNAWLVGEVPVGAVIVREVDGVHQVVATGYNRPITTHDPTAHAEIV 68

Query: 58  AIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFY 117
           A+R   ++L    LP+ +LYVTLEPC MCA A+  AR +R+ Y A++PK G   +    +
Sbjct: 69  ALRHAAQLLGNYRLPDCELYVTLEPCAMCAMALVHARFKRVVYAAADPKTGAAGSVIDLF 128

Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDFF 145
                +H   +  G+      Q++++FF
Sbjct: 129 AQRQLNHHTAVQGGVLADTCGQLLREFF 156


>gi|283477539|emb|CAY73455.1| tRNA-specific adenosine deaminase [Erwinia pyrifoliae DSM 12163]
          Length = 157

 Score =  212 bits (541), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 54/142 (38%), Positives = 77/142 (54%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  AL  A+ A    E+PVGAV VL+ + I    NR     D TAHAE++A+R G +++ 
Sbjct: 1   MRHALRLARRAWDEGEVPVGAVLVLDGQAIGEGWNRPIGQHDPTAHAEMMALRQGGKVIE 60

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
              L +  LYVTLEPC MCA A+   R+ RL YGA + K G   +       A  +H  +
Sbjct: 61  NYRLLDTTLYVTLEPCVMCAGAMIHGRVGRLVYGARDAKTGAAGSLLDVLGHAGMNHHVQ 120

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
           +  G+       ++ DFF++RR
Sbjct: 121 VDCGVLRDECAAMLSDFFRQRR 142


>gi|306826204|ref|ZP_07459538.1| tRNA-specific adenosine deaminase [Streptococcus sp. oral taxon 071
           str. 73H25AP]
 gi|304431480|gb|EFM34462.1| tRNA-specific adenosine deaminase [Streptococcus sp. oral taxon 071
           str. 73H25AP]
          Length = 155

 Score =  212 bits (541), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 59/148 (39%), Positives = 78/148 (52%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           ++   FM  AL EA+ A   +EIP+G V V + +II R  N   EL+    HAEI+AI  
Sbjct: 6   EEKEAFMREALREAEIALEHDEIPIGCVIVKDREIIGRGHNAREELQRAVMHAEIMAIEN 65

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
                    L +  L+VT+EPC MC+ AI LARI  + YGA N K G   +     T   
Sbjct: 66  ANVSEESWRLLDCTLFVTIEPCVMCSGAIGLARIPNVVYGAKNQKFGAAGSLYDILTDER 125

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H  E+  GI E     I+QDFF+ RR
Sbjct: 126 LNHRVEVETGILEDDCAAIMQDFFRNRR 153


>gi|221133296|ref|ZP_03559601.1| CMP/dCMP deaminase, zinc-binding protein [Glaciecola sp. HTCC2999]
          Length = 175

 Score =  212 bits (541), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 55/149 (36%), Positives = 83/149 (55%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M++  ++M+ AL  A  A    E+PVGAV VL+N+II    NR+    D   HAEI+AI+
Sbjct: 7   MEQDELWMTHALSLADKAQQTGEVPVGAVIVLDNQIIGEGYNRSIINHDPCGHAEIMAIQ 66

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              + ++   + +  +YVTLEPC MCA AI  AR++R+ +GAS+ K G   +        
Sbjct: 67  SAAQHINNYRILDATMYVTLEPCAMCAGAIVHARMKRVVFGASDLKTGCAGSILNLLQHD 126

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  E+  G+  +     I  FFK+RR
Sbjct: 127 KLNHQVELQRGVLSELCSAKISQFFKDRR 155


>gi|160947058|ref|ZP_02094225.1| hypothetical protein PEPMIC_00989 [Parvimonas micra ATCC 33270]
 gi|158446192|gb|EDP23187.1| hypothetical protein PEPMIC_00989 [Parvimonas micra ATCC 33270]
          Length = 155

 Score =  212 bits (541), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 58/149 (38%), Positives = 82/149 (55%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M +   FM  AL+EA+ A  + E+P+G V V ++KI+SR  N+    K    HAEI+AI 
Sbjct: 1   MSRDEYFMDIALKEAKKAYNKGEVPIGCVIVKDDKIVSRGHNQVLSKKSGVNHAEIIAIN 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              + L    L + +L+VTLEPC MCA AI  +RI+R+  GA + K G   +        
Sbjct: 61  KAGQKLGDFRLEDTELFVTLEPCCMCAGAIVNSRIKRVIIGAMDVKRGFCGSIENVLDRQ 120

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H   I  G+ EQ+   I+QDFFK  R
Sbjct: 121 ELNHRSIIKTGVLEQKCLDILQDFFKNLR 149


>gi|119897879|ref|YP_933092.1| cytidine deaminase [Azoarcus sp. BH72]
 gi|119670292|emb|CAL94205.1| cytidine deaminase [Azoarcus sp. BH72]
          Length = 154

 Score =  212 bits (541), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 59/147 (40%), Positives = 79/147 (53%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
           K  +FM  ALE+A  A   +E+PVGAV V   +I+ R  N+     D TAHAE++A+R  
Sbjct: 2   KDEMFMRAALEQAHLAGACDEVPVGAVVVCEGEIVGRGFNQPIGRHDPTAHAEVMALRDA 61

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
              L    LP  +LYVTLEPC MC+ AI  ARI R+ YGA +PK G   +    Y     
Sbjct: 62  AARLGNYRLPGCELYVTLEPCVMCSGAIMHARIARVVYGARDPKTGVAGSVIDLYAEGRL 121

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H   I  G+  +    ++  FF  RR
Sbjct: 122 NHHASIEGGLLAEECGGLLSSFFAARR 148


>gi|91225086|ref|ZP_01260308.1| YfhC protein [Vibrio alginolyticus 12G01]
 gi|91190029|gb|EAS76300.1| YfhC protein [Vibrio alginolyticus 12G01]
          Length = 169

 Score =  212 bits (541), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 54/142 (38%), Positives = 76/142 (53%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  A+E A+ A    E+PVGAV V + +II+   NR+    D TAHAEI  +R   + L 
Sbjct: 1   MRRAMELAEQAEAEGEVPVGAVLVKDGEIIAEGRNRSIGTHDATAHAEIQTLRKAGQKLE 60

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
              L +  LYVTLEPC MCA A+  +R++R+ +GA + K G        +     +H   
Sbjct: 61  NYRLLDTTLYVTLEPCPMCAGALLHSRVKRVVFGAPDLKAGAAGTVLNLFESQAAYHYAL 120

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
           +  G+ E   R  +Q FFK RR
Sbjct: 121 VEKGLLEDECRTQLQAFFKRRR 142


>gi|171058718|ref|YP_001791067.1| CMP/dCMP deaminase zinc-binding [Leptothrix cholodnii SP-6]
 gi|170776163|gb|ACB34302.1| CMP/dCMP deaminase zinc-binding [Leptothrix cholodnii SP-6]
          Length = 231

 Score =  212 bits (541), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 56/152 (36%), Positives = 87/152 (57%), Gaps = 4/152 (2%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVL---NN-KIISRAGNRNRELKDVTAHAEIL 57
            +    M  AL++A NA L  E+PVGAV V    +  ++I+   NR     D TAHAE++
Sbjct: 9   SRDENTMRLALDQALNAHLAGEVPVGAVIVRHTADGPQVIATGYNRPVTTNDPTAHAELV 68

Query: 58  AIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFY 117
           A+R    +L    LP+ ++Y+TLEPC MCA A+  AR+RR+ +GA +PK G   +    +
Sbjct: 69  ALRHAATLLENYRLPDCEIYITLEPCAMCAMALLHARLRRVVFGAWDPKTGAAGSVVNLF 128

Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
            L   +H  E+  G+      +++++FF ERR
Sbjct: 129 DLPQLNHQTEVQGGVLADSCGRVLREFFVERR 160


>gi|165975988|ref|YP_001651581.1| tRNA-specific adenosine deaminase [Actinobacillus pleuropneumoniae
           serovar 3 str. JL03]
 gi|190149887|ref|YP_001968412.1| tRNA-specific adenosine deaminase [Actinobacillus pleuropneumoniae
           serovar 7 str. AP76]
 gi|307247548|ref|ZP_07529592.1| tRNA-specific adenosine deaminase [Actinobacillus pleuropneumoniae
           serovar 2 str. S1536]
 gi|307252128|ref|ZP_07534027.1| tRNA-specific adenosine deaminase [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
 gi|307256596|ref|ZP_07538377.1| tRNA-specific adenosine deaminase [Actinobacillus pleuropneumoniae
           serovar 10 str. D13039]
 gi|307261030|ref|ZP_07542712.1| tRNA-specific adenosine deaminase [Actinobacillus pleuropneumoniae
           serovar 12 str. 1096]
 gi|307263211|ref|ZP_07544831.1| tRNA-specific adenosine deaminase [Actinobacillus pleuropneumoniae
           serovar 13 str. N273]
 gi|165876089|gb|ABY69137.1| tRNA-specific adenosine deaminase [Actinobacillus pleuropneumoniae
           serovar 3 str. JL03]
 gi|189915018|gb|ACE61270.1| tRNA-specific adenosine deaminase [Actinobacillus pleuropneumoniae
           serovar 7 str. AP76]
 gi|306855913|gb|EFM88072.1| tRNA-specific adenosine deaminase [Actinobacillus pleuropneumoniae
           serovar 2 str. S1536]
 gi|306860428|gb|EFM92442.1| tRNA-specific adenosine deaminase [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
 gi|306865006|gb|EFM96908.1| tRNA-specific adenosine deaminase [Actinobacillus pleuropneumoniae
           serovar 10 str. D13039]
 gi|306869332|gb|EFN01127.1| tRNA-specific adenosine deaminase [Actinobacillus pleuropneumoniae
           serovar 12 str. 1096]
 gi|306871428|gb|EFN03152.1| tRNA-specific adenosine deaminase [Actinobacillus pleuropneumoniae
           serovar 13 str. N273]
          Length = 196

 Score =  212 bits (541), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 61/145 (42%), Positives = 79/145 (54%), Gaps = 1/145 (0%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIR 60
           ++   FM  ALE A  A    EIPVGAV V     II    N+  +L D +AHAE+LAIR
Sbjct: 38  EQDIHFMRYALELADRAEAIGEIPVGAVLVDQEGNIIGEGWNQVIQLSDPSAHAEMLAIR 97

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              ++     L +  LYVTLEPCTMCA AI  +R+RRL +GAS+ K G I +    +   
Sbjct: 98  QAGKVQRNYRLLDCTLYVTLEPCTMCAGAILHSRLRRLVFGASDYKTGAIGSRFHLFEDY 157

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFF 145
             +H  EI  G+  +   Q I  FF
Sbjct: 158 KMNHFLEIRGGVLAEECSQKISRFF 182


>gi|227877638|ref|ZP_03995691.1| nucleoside deaminase [Lactobacillus crispatus JV-V01]
 gi|227862786|gb|EEJ70252.1| nucleoside deaminase [Lactobacillus crispatus JV-V01]
          Length = 185

 Score =  212 bits (541), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 50/149 (33%), Positives = 85/149 (57%), Gaps = 1/149 (0%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIR 60
           +    +M  A+++A+ A  + E+P+GAV V  + +++    NR    +D T HAE++AI+
Sbjct: 24  EDKRKYMQLAIDQAKEAEKQGEVPIGAVVVDPDGRVVGTGYNRRELDEDATQHAEMIAIK 83

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
             C  L    L +  L+VTLEPC MCA AI  +RI+ +Y+GA +PK G   +    +++ 
Sbjct: 84  EACSKLGMWRLIDCSLFVTLEPCPMCAGAIINSRIKDVYFGALDPKAGACGSVVDLFSVE 143

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H P    G+   +  Q+++DFF+  R
Sbjct: 144 KFNHHPHAIRGLYRDQCAQMLKDFFRAIR 172


>gi|87198248|ref|YP_495505.1| tRNA-adenosine deaminase [Novosphingobium aromaticivorans DSM
           12444]
 gi|87133929|gb|ABD24671.1| tRNA-adenosine deaminase [Novosphingobium aromaticivorans DSM
           12444]
          Length = 151

 Score =  212 bits (541), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 71/142 (50%), Positives = 99/142 (69%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  AL+EA  AA   E+P+GAV V + K+++ A NR R L+D TAHAE+LAIR     L 
Sbjct: 10  MRLALDEALRAADEGEVPIGAVVVKDGKVVAAAHNRPRTLRDPTAHAEMLAIRAAAAQLG 69

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
           QE L   DL+V+LEPC MCA AI+ ARI R+YY AS+PKGG +E+G++ +   TC H PE
Sbjct: 70  QERLEGCDLWVSLEPCAMCAGAIAHARIARVYYAASDPKGGAVEHGSRVFDQPTCLHRPE 129

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
           +Y G+ E  + ++++ FF++RR
Sbjct: 130 VYSGMGEAEAAEMLRTFFRDRR 151


>gi|222085014|ref|YP_002543543.1| cytosine deaminase protein [Agrobacterium radiobacter K84]
 gi|221722462|gb|ACM25618.1| cytosine deaminase protein [Agrobacterium radiobacter K84]
          Length = 152

 Score =  212 bits (541), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 92/149 (61%), Positives = 115/149 (77%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M   N FM  AL EA++A  R E+P+GAV VL+N +I++AGNR REL DVTAHAEI AIR
Sbjct: 1   MANTNHFMKLALAEARSAGARGEVPIGAVLVLDNAVIAKAGNRTRELNDVTAHAEIAAIR 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
           + C  L QE L   DLYVTLEPCTMCAAAIS ARIRRLYYGA +PKGGG++NG +FY   
Sbjct: 61  IACEALGQERLTGADLYVTLEPCTMCAAAISFARIRRLYYGAEDPKGGGVDNGVRFYRQP 120

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
           TCHH+PE+Y GI+E+ +  I+++FF+ +R
Sbjct: 121 TCHHAPEVYSGIAERDAADILREFFQLKR 149


>gi|295694717|ref|YP_003587955.1| CMP/dCMP deaminase zinc-binding protein [Bacillus tusciae DSM 2912]
 gi|295410319|gb|ADG04811.1| CMP/dCMP deaminase zinc-binding protein [Bacillus tusciae DSM 2912]
          Length = 174

 Score =  212 bits (541), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 52/147 (35%), Positives = 77/147 (52%), Gaps = 1/147 (0%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
           +   +M  AL+ A  A    E+P+GAV V   KI+    N      D TAHAE++A+R  
Sbjct: 6   RDLQYMERALQLAAYAGEMGEVPIGAVVVAGGKILGEGCNLREMWNDPTAHAEMVALRQA 65

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
            + +    L    LYVTLEPC MC  A  LAR+ R+ +GA +PK G   +  Q    A  
Sbjct: 66  AQAVGGWRLSGTTLYVTLEPCAMCVGAAVLARVERVVFGAPDPKAGACGSVLQV-ADAPL 124

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H  ++  G+ +Q    +++ FF+E R
Sbjct: 125 NHRLKVEGGVLQQSCSHLLKQFFRELR 151


>gi|218247490|ref|YP_002372861.1| CMP/dCMP deaminase [Cyanothece sp. PCC 8801]
 gi|257061174|ref|YP_003139062.1| CMP/dCMP deaminase zinc-binding [Cyanothece sp. PCC 8802]
 gi|218167968|gb|ACK66705.1| CMP/dCMP deaminase zinc-binding [Cyanothece sp. PCC 8801]
 gi|256591340|gb|ACV02227.1| CMP/dCMP deaminase zinc-binding [Cyanothece sp. PCC 8802]
          Length = 154

 Score =  212 bits (540), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 57/147 (38%), Positives = 77/147 (52%), Gaps = 1/147 (0%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
              +M  AL +A+ A    E+PVGA+ V     +++  GNR    +D TAHAE+LAIR  
Sbjct: 7   HRYWMEKALNQAKLAGEIGEVPVGAIIVDHQGNLLAETGNRKETNQDPTAHAEMLAIRQA 66

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
            + L    L    LYVTLEPC MC  A+  +R+  L YG   PK G I         A  
Sbjct: 67  SQRLQTWHLNNCTLYVTLEPCPMCTGALIQSRLGLLVYGCDEPKSGTIRTVMNLPDSACS 126

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H   +  GI E+  RQ +Q +F+ERR
Sbjct: 127 NHRLAVISGILEEECRQQLQQWFRERR 153


>gi|22536583|ref|NP_687434.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus
           agalactiae 2603V/R]
 gi|25010509|ref|NP_734904.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus
           agalactiae NEM316]
 gi|76788440|ref|YP_329120.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus
           agalactiae A909]
 gi|77408782|ref|ZP_00785512.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus
           agalactiae COH1]
 gi|77412323|ref|ZP_00788636.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus
           agalactiae CJB111]
 gi|77413967|ref|ZP_00790141.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus
           agalactiae 515]
 gi|22533418|gb|AAM99306.1|AE014209_19 cytidine/deoxycytidylate deaminase family protein [Streptococcus
           agalactiae 2603V/R]
 gi|23094862|emb|CAD46080.1| Unknown [Streptococcus agalactiae NEM316]
 gi|76563497|gb|ABA46081.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus
           agalactiae A909]
 gi|77160003|gb|EAO71140.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus
           agalactiae 515]
 gi|77161612|gb|EAO72610.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus
           agalactiae CJB111]
 gi|77172627|gb|EAO75766.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus
           agalactiae COH1]
 gi|319744400|gb|EFV96759.1| cytidine/deoxycytidylate deaminase [Streptococcus agalactiae ATCC
           13813]
          Length = 168

 Score =  212 bits (540), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 55/148 (37%), Positives = 82/148 (55%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           ++   FM+ AL+EA+++  + EIP+G V V +  II R  N   E      HAEI+AI  
Sbjct: 7   EEKEWFMTEALKEAKSSLEKEEIPIGCVIVKDGHIIGRGHNAREEFNKAILHAEIMAINN 66

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
               +    L +  L+VT+EPC MC+ AI LARI  + YGA N K G   +     + + 
Sbjct: 67  ANEKVGNWRLLDTTLFVTVEPCVMCSGAIGLARIPHVIYGAKNTKFGAAGSLYDILSDSR 126

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H  E+  GI E +  +I+QDFF++ R
Sbjct: 127 LNHRVEVETGILEDQCAKIMQDFFRKGR 154


>gi|260581733|ref|ZP_05849530.1| ComE operon protein 2 [Haemophilus influenzae NT127]
 gi|319897607|ref|YP_004135804.1| tRNA-specific adenosine deaminase [Haemophilus influenzae F3031]
 gi|260095326|gb|EEW79217.1| ComE operon protein 2 [Haemophilus influenzae NT127]
 gi|317433113|emb|CBY81487.1| tRNA-specific adenosine deaminase [Haemophilus influenzae F3031]
          Length = 173

 Score =  212 bits (540), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 62/147 (42%), Positives = 82/147 (55%), Gaps = 1/147 (0%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNK-IISRAGNRNRELKDVTAHAEILAIRMG 62
               M  ALE A  A    EIPVGAV V + + II    N +    D TAHAEI+A+R G
Sbjct: 11  DEKMMRYALELADKAEALGEIPVGAVLVDDARNIIGEGWNLSIVQSDPTAHAEIIALRNG 70

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
            + +    L    LYVTLEPCTMCA AI  +RI+RL +GAS+ K G I +   F+     
Sbjct: 71  AKNIQNYRLLNSTLYVTLEPCTMCAGAILHSRIKRLVFGASDYKTGAIGSRFHFFDDYKM 130

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H+ EI  G+  +   Q +  FF++RR
Sbjct: 131 NHTLEITSGVLAEECSQKLSTFFQKRR 157


>gi|330936949|gb|EGH41059.1| cytidine/deoxycytidylate deaminase, zinc-binding region
           [Pseudomonas syringae pv. pisi str. 1704B]
          Length = 169

 Score =  212 bits (540), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 59/148 (39%), Positives = 81/148 (54%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
                FM  AL  A   AL  E+PVGAV V N +II R  N      D +AHAE++AIR 
Sbjct: 10  SNDQYFMREALALASQGALLGEVPVGAVVVQNGEIIGRGYNCPISGSDPSAHAEMVAIRD 69

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
             + L    LP   LYVTLEPC+MCA  I  +R+ R+ YGA  PK G +++  QF++ A 
Sbjct: 70  AAKALDNYRLPGSTLYVTLEPCSMCAGLIVHSRVARVVYGALEPKAGIVQSQGQFFSQAF 129

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H      G+  +    ++ +FF+ RR
Sbjct: 130 LNHRVLFEGGVLGEECGTMLSEFFRMRR 157


>gi|323143534|ref|ZP_08078213.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Succinatimonas hippei YIT 12066]
 gi|322416695|gb|EFY07350.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Succinatimonas hippei YIT 12066]
          Length = 175

 Score =  212 bits (540), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 58/148 (39%), Positives = 83/148 (56%), Gaps = 1/148 (0%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRM 61
               FMS AL +A++A    EIPVGAV V    +I+S   NR     D  AHAEI+A+R 
Sbjct: 5   NDEYFMSLALSQARHAWDLGEIPVGAVIVNAAKEIVSVGCNRTIIDNDPCAHAEIVALRN 64

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
             +IL    L ++ +YVTLEPC MC+ A+  AR++RL YGA +PK G   +       + 
Sbjct: 65  AGKILDTYRLTDLTMYVTLEPCCMCSGALIHARLKRLVYGAKDPKTGACGSVFDILIDSR 124

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H  ++  G+ E     +++ FFK RR
Sbjct: 125 HNHKIDVEGGVLESSCSDLLKSFFKMRR 152


>gi|55821816|ref|YP_140258.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus
           thermophilus LMG 18311]
 gi|55737801|gb|AAV61443.1| cytidine/deoxycytidylate deaminase family protein, putative
           [Streptococcus thermophilus LMG 18311]
          Length = 172

 Score =  212 bits (540), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 57/148 (38%), Positives = 85/148 (57%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           ++  +FMS AL+EAQ +  + EIP+G V V + +I+ R  N   EL     HAE++AI+ 
Sbjct: 7   EEKEIFMSEALKEAQKSLDKAEIPIGCVIVKDREIVGRGHNAREELNQAIMHAEVMAIQE 66

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
             R +    L +  L+VT+EPC MC+ AI LARI ++ YGA N K GG  +         
Sbjct: 67  ANRTVGNWRLLDCTLFVTIEPCVMCSGAIGLARIPKVIYGACNQKFGGAGSLYDILRDDR 126

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H  E+  G+ E    +I+QDFF++ R
Sbjct: 127 LNHRVEVETGVMEADCAKIMQDFFRQSR 154


>gi|317496201|ref|ZP_07954561.1| cytidine and deoxycytidylate deaminase zinc-binding protein
           [Gemella moribillum M424]
 gi|316913776|gb|EFV35262.1| cytidine and deoxycytidylate deaminase zinc-binding protein
           [Gemella moribillum M424]
          Length = 153

 Score =  212 bits (540), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 53/149 (35%), Positives = 83/149 (55%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           MK  N +M  ALEEA+ A  + E+PVGAV V++++++++A N     + V  HAE+L I+
Sbjct: 1   MKDHNYYMEMALEEARRAYQKGEVPVGAVLVIDDEVVAKAHNTREASQQVLNHAEMLVIK 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
             C  +    L    LY T+EPC MC+ AI  AR+  + YGA++ K G   +        
Sbjct: 61  EACEKIGFWRLDNSYLYTTVEPCVMCSGAIVQARVENVIYGAADVKYGCCGSCIDLVANN 120

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H   I  G+ E+    +++DFF+E R
Sbjct: 121 KFNHQAHIISGVLEEECAALMKDFFRELR 149


>gi|306834459|ref|ZP_07467572.1| tRNA-specific adenosine deaminase [Streptococcus bovis ATCC 700338]
 gi|304423261|gb|EFM26414.1| tRNA-specific adenosine deaminase [Streptococcus bovis ATCC 700338]
          Length = 168

 Score =  212 bits (540), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 59/148 (39%), Positives = 80/148 (54%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           ++   FM  AL+EAQ +  + EIP+G V V N  II R  N   E +    HAEI+AI  
Sbjct: 7   EEKEYFMREALKEAQKSLAKEEIPIGCVIVKNGDIIGRGHNAREERQKAILHAEIMAIDD 66

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
                    L +  L+VT+EPC MC+ AI LARI ++ YGA+N K GG  +     T   
Sbjct: 67  ANENEGNWRLLDSTLFVTIEPCVMCSGAIGLARIPQVIYGAANQKFGGAGSLYDILTDVR 126

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H  E+  GI E     I+QDFF++ R
Sbjct: 127 LNHRVEVETGILETECAAIMQDFFRKNR 154


>gi|161869845|ref|YP_001599014.1| cytidine and deoxycytidylate deaminase family protein [Neisseria
           meningitidis 053442]
 gi|161595398|gb|ABX73058.1| cytidine and deoxycytidylate deaminase family protein [Neisseria
           meningitidis 053442]
          Length = 239

 Score =  212 bits (540), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 56/148 (37%), Positives = 82/148 (55%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           ++   FM  AL +A+ +A   EIPVGAV V + KII+ A N      +V+ HAEI A+  
Sbjct: 90  EEMEHFMREALRQAEQSAADGEIPVGAVIVSDGKIIASAHNTCIADCNVSRHAEINALAQ 149

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
             R +    L   D+Y+TLEPC MCA+A+  ARIRR+ YGA+ PK G   +    +    
Sbjct: 150 AGREIQNYRLDGCDIYITLEPCAMCASALIQARIRRVIYGAAEPKTGAAGSIVNLFADKR 209

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +    I  GI ++  R ++  FF+ +R
Sbjct: 210 LNTHTAIRGGILQEECRAVLSRFFQNKR 237


>gi|331003430|ref|ZP_08326929.1| hypothetical protein HMPREF0491_01791 [Lachnospiraceae oral taxon
           107 str. F0167]
 gi|330412476|gb|EGG91865.1| hypothetical protein HMPREF0491_01791 [Lachnospiraceae oral taxon
           107 str. F0167]
          Length = 155

 Score =  212 bits (540), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 52/151 (34%), Positives = 79/151 (52%), Gaps = 2/151 (1%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M + N F+  A+++A+ A    ++P+G V V  +KII+R  NR  + K   +HAEI+AI+
Sbjct: 1   MDRDNYFLKEAVKQAKKAGEIGDVPIGCVIVFEDKIIARGYNRRNKDKSTLSHAEIIAIK 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
             C+ +    L +  +Y+TLEPC MCA AI  +RI+R+  GA NPK G   +        
Sbjct: 61  KACKKIGDWRLEDCTMYITLEPCPMCAGAIIQSRIKRVVLGAMNPKAGCAGSIINILQTE 120

Query: 121 TCHHSPEI--YPGISEQRSRQIIQDFFKERR 149
             +H  EI             ++  FFK  R
Sbjct: 121 GFNHKTEISLIDEPLHSECVSLLTSFFKALR 151


>gi|326624390|gb|EGE30735.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp.
           enterica serovar Dublin str. 3246]
          Length = 161

 Score =  212 bits (540), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 55/142 (38%), Positives = 76/142 (53%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  AL  A+ A    E+PVGAV V N+++I    NR     D TAHAEI+A+R G  +L 
Sbjct: 1   MRHALTLAKRAWDEREVPVGAVLVHNHRVIGEGWNRPIGRHDPTAHAEIMALRQGGLVLQ 60

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
              L +  LYVTLEPC MCA A+  +RI R+ +GA + K G   +          +H  +
Sbjct: 61  NYRLLDTTLYVTLEPCVMCAGAMVHSRIGRVVFGARDAKTGAAGSLIDVLHHPGMNHRVD 120

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
           I  G+       ++ DFF+ RR
Sbjct: 121 IIEGVLRDECATLLSDFFRMRR 142


>gi|328952357|ref|YP_004369691.1| CMP/dCMP deaminase zinc-binding protein [Desulfobacca acetoxidans
           DSM 11109]
 gi|328452681|gb|AEB08510.1| CMP/dCMP deaminase zinc-binding protein [Desulfobacca acetoxidans
           DSM 11109]
          Length = 167

 Score =  212 bits (540), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 57/147 (38%), Positives = 82/147 (55%), Gaps = 1/147 (0%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
              +M  A+ EA+ A+   E+PVGAV +    KII +  N+     D +AHAEI+A+R  
Sbjct: 20  DQAYMCLAIGEAKKASSLQEVPVGAVVIDKAGKIIGQGHNQPIASHDPSAHAEIVALRQA 79

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
                   LP+  +YVTLEPC MC  A+  AR+RRL YGA +PKGG   +  +       
Sbjct: 80  SACSRNYRLPDCTMYVTLEPCIMCIGAVLQARLRRLVYGADDPKGGACVSLYRLPEDTRL 139

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H  E+  G+ E   R ++Q+FF+ RR
Sbjct: 140 NHRLEVVRGVCEAECRTLLQEFFRRRR 166


>gi|68249492|ref|YP_248604.1| hypothetical protein NTHI1073 [Haemophilus influenzae 86-028NP]
 gi|145636963|ref|ZP_01792627.1| preprotein translocase subunit SecA [Haemophilus influenzae PittHH]
 gi|145638273|ref|ZP_01793883.1| preprotein translocase subunit SecA [Haemophilus influenzae PittII]
 gi|68057691|gb|AAX87944.1| conserved hypothetical protein [Haemophilus influenzae 86-028NP]
 gi|145269821|gb|EDK09760.1| preprotein translocase subunit SecA [Haemophilus influenzae PittHH]
 gi|145272602|gb|EDK12509.1| preprotein translocase subunit SecA [Haemophilus influenzae PittII]
 gi|309751427|gb|ADO81411.1| tRNA-specific adenosine deaminase [Haemophilus influenzae R2866]
 gi|309973597|gb|ADO96798.1| tRNA-specific adenosine deaminase [Haemophilus influenzae R2846]
          Length = 173

 Score =  212 bits (540), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 62/147 (42%), Positives = 82/147 (55%), Gaps = 1/147 (0%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNK-IISRAGNRNRELKDVTAHAEILAIRMG 62
               M  ALE A  A    EIPVGAV V + + II    N +    D TAHAEI+A+R G
Sbjct: 11  DEKMMRYALELADKAEALGEIPVGAVLVDDARNIIGEGWNLSIVQSDPTAHAEIIALRNG 70

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
            + +    L    LYVTLEPCTMCA AI  +RI+RL +GAS+ K G I +   F+     
Sbjct: 71  AKNIQNYRLLNSTLYVTLEPCTMCAGAILHSRIKRLVFGASDYKTGAIGSRFHFFDDYKM 130

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H+ EI  G+  +   Q +  FF++RR
Sbjct: 131 NHTLEITSGVLAEECSQKLSTFFQKRR 157


>gi|167749860|ref|ZP_02421987.1| hypothetical protein EUBSIR_00828 [Eubacterium siraeum DSM 15702]
 gi|167657172|gb|EDS01302.1| hypothetical protein EUBSIR_00828 [Eubacterium siraeum DSM 15702]
          Length = 150

 Score =  212 bits (540), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 54/150 (36%), Positives = 82/150 (54%), Gaps = 2/150 (1%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAI 59
           M     +M+  +E A+ AA + E PVGA+ V  + +II    N     +  TAHAEI+AI
Sbjct: 1   MTADEEYMTLCIELAKKAAEKGECPVGAIVVDKDGRIIGEGYNMREAEQMPTAHAEIIAI 60

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
               + ++   L E  LYVTLEPC MCA AI  +RI+RL YGA + KGG   +  + +  
Sbjct: 61  EQAAKAMNSWRLTECTLYVTLEPCPMCAGAIINSRIKRLVYGAFDEKGGACASLMEIFDY 120

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
              +H P +   + +    +++ +FFK+ R
Sbjct: 121 P-FNHRPMVRSRVLQDECAKLLTEFFKDLR 149


>gi|207723447|ref|YP_002253846.1| cytosine/adenosine deaminase protein [Ralstonia solanacearum MolK2]
 gi|206588648|emb|CAQ35611.1| cytosine/adenosine deaminase protein [Ralstonia solanacearum MolK2]
          Length = 194

 Score =  212 bits (540), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 53/148 (35%), Positives = 78/148 (52%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           ++   +M  AL +A+ A    E+PVGAV V  N+I+    N      D +AHAE+ A+R 
Sbjct: 28  ERDGYWMQQALVQARLAWGEGEVPVGAVVVRGNEIVGVGYNAPIGTHDPSAHAEMRALRQ 87

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
               L    LPE +++VTLEPC MCA A+  AR+ R+ YGA +PK G   +    +    
Sbjct: 88  AAVTLGNYRLPECEVFVTLEPCVMCAGAMLHARVARVVYGAPDPKTGAAGSVLDLFAETR 147

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H   I   +  Q    +++ FF ERR
Sbjct: 148 LNHQTAILGSVLAQECGDMLRAFFAERR 175


>gi|163758411|ref|ZP_02165499.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [Hoeflea
           phototrophica DFL-43]
 gi|162284700|gb|EDQ34983.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [Hoeflea
           phototrophica DFL-43]
          Length = 148

 Score =  212 bits (540), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 85/143 (59%), Positives = 109/143 (76%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  ALEE + AA R E+PVGAV VL+ ++I+RAGNR REL DVTAHAEILAIR     L
Sbjct: 6   YMDLALEEGRQAAERGEVPVGAVIVLDGEVIARAGNRTRELNDVTAHAEILAIRQAAMQL 65

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
           S E L   DLYVTLEPCTMCAAAIS AR+RRLYY A + KGG + +G +F+   TCHH+P
Sbjct: 66  SSERLIGADLYVTLEPCTMCAAAISFARLRRLYYAADDEKGGAVTSGVRFFDQPTCHHAP 125

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           ++YPG++   + ++++DFF+ERR
Sbjct: 126 DVYPGLAASDAMRLLKDFFRERR 148


>gi|145632283|ref|ZP_01788018.1| hypothetical protein CGSHi3655_07509 [Haemophilus influenzae 3655]
 gi|145634073|ref|ZP_01789784.1| hypothetical protein CGSHiAA_08515 [Haemophilus influenzae PittAA]
 gi|229844039|ref|ZP_04464180.1| hypothetical protein CGSHi6P18H1_06366 [Haemophilus influenzae
           6P18H1]
 gi|144987190|gb|EDJ93720.1| hypothetical protein CGSHi3655_07509 [Haemophilus influenzae 3655]
 gi|145268517|gb|EDK08510.1| hypothetical protein CGSHiAA_08515 [Haemophilus influenzae PittAA]
 gi|229813033|gb|EEP48721.1| hypothetical protein CGSHi6P18H1_06366 [Haemophilus influenzae
           6P18H1]
          Length = 173

 Score =  212 bits (540), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 62/147 (42%), Positives = 82/147 (55%), Gaps = 1/147 (0%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNK-IISRAGNRNRELKDVTAHAEILAIRMG 62
               M  ALE A  A    EIPVGAV V + + II    N +    D TAHAEI+A+R G
Sbjct: 11  DEKMMRYALELADKAEALGEIPVGAVLVDDARNIIGEGWNLSIVQSDPTAHAEIIALRNG 70

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
            + +    L    LYVTLEPCTMCA AI  +RI+RL +GAS+ K G I +   F+     
Sbjct: 71  AKNIQNYRLLNSTLYVTLEPCTMCAGAILHSRIKRLVFGASDYKTGAIGSRFHFFNDYKM 130

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H+ EI  G+  +   Q +  FF++RR
Sbjct: 131 NHTLEITSGVLAEECSQKLSTFFQKRR 157


>gi|163749537|ref|ZP_02156784.1| cytidine/deoxycytidylate deaminase family protein [Shewanella
           benthica KT99]
 gi|161330647|gb|EDQ01584.1| cytidine/deoxycytidylate deaminase family protein [Shewanella
           benthica KT99]
          Length = 189

 Score =  212 bits (540), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 49/146 (33%), Positives = 73/146 (50%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
              FMS A+E A+ A    E+PVGAV + + +++S   N    L D +AHAE+  +R   
Sbjct: 22  DKHFMSMAMEMARKAEAVGEVPVGAVLIKDGELVSAGFNYCIGLHDPSAHAEMQCLRQAG 81

Query: 64  RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123
           +++    L    LYVTLEPC MCA A+  +RI RL +GA + K G              +
Sbjct: 82  KVIENYRLLNTTLYVTLEPCAMCAGAMVHSRIERLVFGAKDDKTGAAGTVIDLVRHPAFN 141

Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149
           H  ++  G+        +  FF+ RR
Sbjct: 142 HQLQVSDGVLADECSAQLSQFFRRRR 167


>gi|302379537|ref|ZP_07268022.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Finegoldia magna ACS-171-V-Col3]
 gi|302312444|gb|EFK94440.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Finegoldia magna ACS-171-V-Col3]
          Length = 155

 Score =  212 bits (540), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 48/148 (32%), Positives = 77/148 (52%), Gaps = 1/148 (0%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
                FM  A+E+A+ A   +E+PVG V V N +II++A N      + T HAE+ AI  
Sbjct: 3   NNDEKFMIKAIEQAKIAFDLDEVPVGCVIVKNGEIIAQAYNSVETDNNATMHAELKAINQ 62

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
             +++    L +  +YVTLEPC MC  A+  +RI ++ +GA + K G   +         
Sbjct: 63  ATKVIGNFRLDDCTMYVTLEPCVMCTGALVYSRIPKVVFGAFDKKRGACGSLISLNDYEG 122

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H  E+   I E+   +++Q FF+  R
Sbjct: 123 LNHKIEVKS-IMEKECVELMQSFFRRIR 149


>gi|300724136|ref|YP_003713453.1| TadA, tRNA -specific adenosine deaminase [Xenorhabdus nematophila
           ATCC 19061]
 gi|297630670|emb|CBJ91335.1| TadA, tRNA-specific adenosine deaminase [Xenorhabdus nematophila
           ATCC 19061]
          Length = 170

 Score =  212 bits (540), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 57/147 (38%), Positives = 79/147 (53%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
           +   +M  A+  A  A  + EIPVGA+ V +N+I++   N      D TAHAEI+A+R G
Sbjct: 12  RDEYWMRRAMALAMQAQAQGEIPVGAILVADNEILAEGFNLPITYHDPTAHAEIIALRQG 71

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
              L    L    LYVTLEPC MCA A+  +RI+RL YGAS+ K G   +          
Sbjct: 72  GSRLQNYRLLNTTLYVTLEPCVMCAGAMVHSRIKRLVYGASDMKTGAAGSLIDILRHPGM 131

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H  EI  G+  +    ++  FFK+RR
Sbjct: 132 NHQIEIIGGVLAEECSTMLSSFFKQRR 158


>gi|304383698|ref|ZP_07366157.1| tRNA-specific adenosine deaminase [Prevotella marshii DSM 16973]
 gi|304335222|gb|EFM01493.1| tRNA-specific adenosine deaminase [Prevotella marshii DSM 16973]
          Length = 160

 Score =  212 bits (540), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 64/148 (43%), Positives = 83/148 (56%), Gaps = 5/148 (3%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           K    FM  AL EA+ A    EIPVGA+ V   +I+SRA N    L DVTAHAE+ AI  
Sbjct: 18  KTDEAFMRKALAEAEMAFEEGEIPVGAIIVCKGRILSRAHNLTETLHDVTAHAEMQAITA 77

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
               L  + L    LYVT+EPC MCA A++ A++ R+ YGAS+ K G      + Y    
Sbjct: 78  AADALGGKYLTGCTLYVTVEPCPMCAGALAWAQLSRIVYGASDTKRG-----YRLYAPDV 132

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            H   E+  GI  +  R+++Q FFKERR
Sbjct: 133 LHPKTEVMGGILAEECRELMQRFFKERR 160


>gi|77407016|ref|ZP_00784028.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus
           agalactiae H36B]
 gi|77174376|gb|EAO77233.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus
           agalactiae H36B]
          Length = 168

 Score =  211 bits (539), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 55/148 (37%), Positives = 81/148 (54%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           ++   FM  AL+EA+++  + EIP+G V V +  II R  N   E      HAEI+AI  
Sbjct: 7   EEKEWFMXEALKEAKSSLEKEEIPIGCVIVKDGHIIGRGHNAREEFNKAILHAEIMAINN 66

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
               +    L +  L+VT+EPC MC+ AI LARI  + YGA N K G   +     + + 
Sbjct: 67  ANEKVGNWRLLDTTLFVTVEPCVMCSGAIGLARIPHVIYGAKNTKFGAAGSLYDILSDSR 126

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H  E+  GI E +  +I+QDFF++ R
Sbjct: 127 LNHRVEVETGILEDQCAKIMQDFFRKGR 154


>gi|300860777|ref|ZP_07106864.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Enterococcus faecalis TUSoD Ef11]
 gi|300849816|gb|EFK77566.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Enterococcus faecalis TUSoD Ef11]
 gi|315146059|gb|EFT90075.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Enterococcus faecalis TX2141]
          Length = 173

 Score =  211 bits (539), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 56/148 (37%), Positives = 81/148 (54%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           ++   FM  A+ EA+ A    E+P+GAV V   +II R  N     ++ TAHAE+ AI+ 
Sbjct: 11  EEKEFFMREAIAEAKKAEGLAEVPIGAVIVRQGEIIGRGHNLREARQEATAHAEMYAIQE 70

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
            CR +    L E  L+VTLEPC MC+ A+ LARI  +YYGA++PK G             
Sbjct: 71  ACRGIENWRLEETQLFVTLEPCPMCSGAMLLARIPEVYYGATDPKAGTAGTLMNLLEDER 130

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H   +  G+ E+  R ++  FFK+ R
Sbjct: 131 FNHVAYVEAGVLEEECRLLLVQFFKKLR 158


>gi|116628523|ref|YP_821142.1| cytidine/deoxycytidylate deaminase family protein, putative
           [Streptococcus thermophilus LMD-9]
 gi|116101800|gb|ABJ66946.1| tRNA-adenosine deaminase [Streptococcus thermophilus LMD-9]
          Length = 172

 Score =  211 bits (539), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 57/148 (38%), Positives = 85/148 (57%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           ++  +FMS AL+EAQ +  + EIP+G V V + +I+ R  N   EL     HAE++AI+ 
Sbjct: 7   EEKEIFMSEALKEAQKSLDKAEIPIGCVIVKDREIVGRGHNAREELNQAIMHAEVMAIQE 66

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
             R +    L +  L+VT+EPC MC+ AI LARI ++ YGA N K GG  +         
Sbjct: 67  ANRTVGNWRLLDCTLFVTIEPCVMCSGAIGLARIPKVIYGACNQKFGGAGSLYDILRDER 126

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H  E+  G+ E    +I+QDFF++ R
Sbjct: 127 LNHRVEVETGVMEADCAKIMQDFFRQSR 154


>gi|90422427|ref|YP_530797.1| CMP/dCMP deaminase, zinc-binding [Rhodopseudomonas palustris
           BisB18]
 gi|90104441|gb|ABD86478.1| tRNA-adenosine deaminase [Rhodopseudomonas palustris BisB18]
          Length = 148

 Score =  211 bits (539), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 80/143 (55%), Positives = 100/143 (69%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  AL+ A+ A    E+P+G V VLNN +I+ AGNR    +D TAHAE+LAIR     L
Sbjct: 6   FMDLALKAAETAQNAGEVPIGCVIVLNNAVIASAGNRTLTDRDPTAHAEVLAIRQAAAAL 65

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
             E L   DLYVTLEPCTMCA AIS ARIRRLYYGA++PKGG +E+G +F+   TCHH P
Sbjct: 66  GSERLSGCDLYVTLEPCTMCAGAISFARIRRLYYGAADPKGGAVESGVRFFAQPTCHHVP 125

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+Y  + E RS Q+++ FF+ RR
Sbjct: 126 EVYSALGESRSAQMLRQFFQARR 148


>gi|315641449|ref|ZP_07896521.1| tRNA-specific adenosine deaminase [Enterococcus italicus DSM 15952]
 gi|315482737|gb|EFU73261.1| tRNA-specific adenosine deaminase [Enterococcus italicus DSM 15952]
          Length = 186

 Score =  211 bits (539), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 55/148 (37%), Positives = 80/148 (54%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           ++   FM  A+ EA+ A    E+P+GAV VL  +II R  N     +D T HAE++AIR 
Sbjct: 25  EEKAYFMCAAIGEAKKAQAIAEVPIGAVVVLEGEIIGRGHNLRETTQDATMHAEMIAIRE 84

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
            C  +    L +  L+VTLEPC MC  A  L+R+  +Y+GA +PKGG   +     T   
Sbjct: 85  ACAKVGSWRLEDSQLFVTLEPCPMCGGAAMLSRVEEIYFGAYDPKGGATGSLLNLATDER 144

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H   +  GI +     +++ FFKE R
Sbjct: 145 FNHWSYVEAGILQAECSDLLRTFFKELR 172


>gi|108758559|ref|YP_630178.1| cytidine and deoxycytidylate deaminase zinc-binding
           domain-containing protein [Myxococcus xanthus DK 1622]
 gi|108462439|gb|ABF87624.1| cytidine and deoxycytidylate deaminase zinc-binding domain protein
           [Myxococcus xanthus DK 1622]
          Length = 154

 Score =  211 bits (539), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 55/147 (37%), Positives = 78/147 (53%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
               FM  AL  A+ AA   E+PVGAVAVLN +++    NR    ++  AHAE+LA+   
Sbjct: 2   SDEAFMQQALSLAREAAELGEVPVGAVAVLNGEVVGAGFNRREVDRNPLAHAEMLAMDAA 61

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
            R +    L  V LYVTLEPC MCA  +  +R+ RL +GA +PK G + +          
Sbjct: 62  ARKIGAWRLSGVTLYVTLEPCAMCAGGLVQSRVTRLVFGAFDPKAGAVGSLYNLVEEPRH 121

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H  ++  GI    SR +++ FF   R
Sbjct: 122 NHRLQVTSGILADESRLLLKTFFGRLR 148


>gi|227894597|ref|ZP_04012402.1| nucleoside deaminase [Lactobacillus ultunensis DSM 16047]
 gi|227863588|gb|EEJ71009.1| nucleoside deaminase [Lactobacillus ultunensis DSM 16047]
          Length = 174

 Score =  211 bits (539), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 53/149 (35%), Positives = 85/149 (57%), Gaps = 1/149 (0%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIR 60
                +M  A+++A+ A  + E+P+GAV V  + K+I    NR    +D T HAE++AI+
Sbjct: 10  DDKKKYMQLAMDQAKIAEQQGEVPIGAVIVDPDGKVIGTGYNRRELDEDSTQHAEMIAIK 69

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
             C+ L    L +  L+VTLEPC MCA AI  +RI+ +Y+GA +PK G   +    +T+ 
Sbjct: 70  EACKNLGMWRLIDCSLFVTLEPCPMCAGAIINSRIKDVYFGALDPKAGACGSVVDLFTVD 129

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H P    G+   +  Q+++DFF+  R
Sbjct: 130 KFNHHPRAIRGLYRDQCAQMLKDFFRGIR 158


>gi|46143725|ref|ZP_00134574.2| COG0590: Cytosine/adenosine deaminases [Actinobacillus
           pleuropneumoniae serovar 1 str. 4074]
 gi|126208056|ref|YP_001053281.1| tRNA-specific adenosine deaminase [Actinobacillus pleuropneumoniae
           L20]
 gi|126096848|gb|ABN73676.1| tRNA-specific adenosine deaminase [Actinobacillus pleuropneumoniae
           serovar 5b str. L20]
          Length = 189

 Score =  211 bits (539), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 61/145 (42%), Positives = 79/145 (54%), Gaps = 1/145 (0%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIR 60
           ++   FM  ALE A  A    EIPVGAV V     II    N+  +L D +AHAE+LAIR
Sbjct: 31  EQDIHFMRYALELADRAEAIGEIPVGAVLVDQEGNIIGEGWNQVIQLSDPSAHAEMLAIR 90

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              ++     L +  LYVTLEPCTMCA AI  +R+RRL +GAS+ K G I +    +   
Sbjct: 91  QAGKVQRNYRLLDCTLYVTLEPCTMCAGAILHSRLRRLVFGASDYKTGAIGSRFHLFEDY 150

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFF 145
             +H  EI  G+  +   Q I  FF
Sbjct: 151 KMNHFLEIRGGVLAEECSQKISRFF 175


>gi|303251559|ref|ZP_07337733.1| tRNA-specific adenosine deaminase [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
 gi|303252205|ref|ZP_07338373.1| tRNA-specific adenosine deaminase [Actinobacillus pleuropneumoniae
           serovar 2 str. 4226]
 gi|302648988|gb|EFL79176.1| tRNA-specific adenosine deaminase [Actinobacillus pleuropneumoniae
           serovar 2 str. 4226]
 gi|302649557|gb|EFL79739.1| tRNA-specific adenosine deaminase [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
          Length = 174

 Score =  211 bits (539), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 61/145 (42%), Positives = 79/145 (54%), Gaps = 1/145 (0%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIR 60
           ++   FM  ALE A  A    EIPVGAV V     II    N+  +L D +AHAE+LAIR
Sbjct: 16  EQDIHFMRYALELADRAEAIGEIPVGAVLVDQEGNIIGEGWNQVIQLSDPSAHAEMLAIR 75

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              ++     L +  LYVTLEPCTMCA AI  +R+RRL +GAS+ K G I +    +   
Sbjct: 76  QAGKVQRNYRLLDCTLYVTLEPCTMCAGAILHSRLRRLVFGASDYKTGAIGSRFHLFEDY 135

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFF 145
             +H  EI  G+  +   Q I  FF
Sbjct: 136 KMNHFLEIRGGVLAEECSQKISRFF 160


>gi|166368572|ref|YP_001660845.1| cytidine and deoxycytidylate deaminase [Microcystis aeruginosa
           NIES-843]
 gi|166090945|dbj|BAG05653.1| cytidine and deoxycytidylate deaminase [Microcystis aeruginosa
           NIES-843]
          Length = 162

 Score =  211 bits (539), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 59/149 (39%), Positives = 82/149 (55%), Gaps = 1/149 (0%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +K   +M  AL  A  A  R ++PVGAV V     +I++  N   +  D TAHAEILAIR
Sbjct: 14  EKHRQWMQLALNLAATAGDRGDVPVGAVIVDKQGHLIAQGANCKEKHHDPTAHAEILAIR 73

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              ++L    L +  LYVTLEPC MCA AI  AR+  L YGA +PK G I     F    
Sbjct: 74  AASQVLGNWHLNDCTLYVTLEPCPMCAGAIIQARLGLLVYGADDPKTGVIRTVANFIDSP 133

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H   +  GI  + S +++Q +F+++R
Sbjct: 134 FSNHRLPVIAGILAKESGELLQTWFEKKR 162


>gi|126662495|ref|ZP_01733494.1| putative cytosine/adenosine deaminase [Flavobacteria bacterium
           BAL38]
 gi|126625874|gb|EAZ96563.1| putative cytosine/adenosine deaminase [Flavobacteria bacterium
           BAL38]
          Length = 146

 Score =  211 bits (539), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 59/147 (40%), Positives = 86/147 (58%), Gaps = 6/147 (4%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
             + FM  AL+EA+ A  + EIPVGAV V++NK+I+R  N    L DVTAHAE+ AI   
Sbjct: 6   TDDYFMKKALQEAETAFEKGEIPVGAVIVIDNKVIARTHNLTELLHDVTAHAEMQAITSA 65

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
              L  + L +  LYVTLEPC MCA A+  ++I ++ +GAS+   G  + GTQ       
Sbjct: 66  ANFLGGKYLKDCTLYVTLEPCQMCAGALYWSQISKIVFGASDENRGFQKMGTQL------ 119

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           H   ++  G+ E+    +++ FFK +R
Sbjct: 120 HPKTQVISGVLEKECADLMKSFFKNKR 146


>gi|323492402|ref|ZP_08097552.1| tRNA-specific adenosine-34 deaminase [Vibrio brasiliensis LMG
           20546]
 gi|323313363|gb|EGA66477.1| tRNA-specific adenosine-34 deaminase [Vibrio brasiliensis LMG
           20546]
          Length = 181

 Score =  211 bits (538), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 52/143 (36%), Positives = 77/143 (53%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
           +  +FM  A+E AQ+A  + E+PVGAV V + +II+   N +    D TAHAE+  IR  
Sbjct: 9   QDELFMRRAMELAQHAEEQGEVPVGAVLVKDGEIIAEGWNESIGSHDATAHAEMQTIRKA 68

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
              L    L +  LYVTLEPC MCA A+  +R++R+ +GA + K G        +     
Sbjct: 69  GLALENYRLLDTTLYVTLEPCPMCAGALLHSRVKRIVFGAPDLKAGAAGTVLNLFEHQAA 128

Query: 123 HHSPEIYPGISEQRSRQIIQDFF 145
           +H  ++  G+ E   R  +Q FF
Sbjct: 129 YHYADVEQGLLEDECRVQLQSFF 151


>gi|269302803|gb|ACZ32903.1| cytidine/deoxycytidylate deaminase family protein [Chlamydophila
           pneumoniae LPCoLN]
          Length = 155

 Score =  211 bits (538), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 59/149 (39%), Positives = 85/149 (57%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M+K   FM  A +EA+ A  ++E+PVG V V ++KII+RA N   +LKD TAHAEIL I 
Sbjct: 1   MEKDIFFMQQAFKEARKAYDQDEVPVGCVIVKDDKIIARAHNSVEKLKDATAHAEILCIG 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              + L    L +  LY TLEPC MCA AI LARI R+ + A + + G   +    +T  
Sbjct: 61  SAAQDLDNWRLLDTVLYCTLEPCLMCAGAIQLARIPRIVWAAPDVRLGAGGSWVNIFTEK 120

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
              H+     G+  + +  +++ FF E+R
Sbjct: 121 HPFHTVSCTGGVCSEEAEHLMKKFFVEKR 149


>gi|218780678|ref|YP_002431996.1| CMP/dCMP deaminase zinc-binding [Desulfatibacillum alkenivorans
           AK-01]
 gi|218762062|gb|ACL04528.1| CMP/dCMP deaminase zinc-binding [Desulfatibacillum alkenivorans
           AK-01]
          Length = 156

 Score =  211 bits (538), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 60/150 (40%), Positives = 90/150 (60%), Gaps = 1/150 (0%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNK-IISRAGNRNRELKDVTAHAEILAI 59
           M+K + +M  AL+EA+ A   +E+PVGAV VL ++ +I +A NR   L D  AHAEILA+
Sbjct: 1   MEKHSKYMQMALDEAKTAWDEDEVPVGAVLVLPDQDLIIKAHNRTIGLNDAAAHAEILAL 60

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
           R   R++    L    LY T+EPC MC  A+  AR+ ++ +GA + K G   +   F + 
Sbjct: 61  REAGRVIGNYRLLNSVLYCTVEPCIMCMGAVIHARVSKVVFGAPDLKWGACGSLYDFASD 120

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
              +H PEI  G+ E+  R I+Q+FF+ +R
Sbjct: 121 PGLNHHPEIVSGVCEEACRTIMQEFFRLKR 150


>gi|148253230|ref|YP_001237815.1| tRNA-adenosine deaminase [Bradyrhizobium sp. BTAi1]
 gi|146405403|gb|ABQ33909.1| tRNA-adenosine deaminase [Bradyrhizobium sp. BTAi1]
          Length = 148

 Score =  211 bits (538), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 76/143 (53%), Positives = 105/143 (73%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  AL+ A++AA+  E+P+G V V +N +I+ A NR    +D TAHAEILA+R   +++
Sbjct: 6   FMDLALKAAESAAISGEVPIGCVVVRDNAVIATAANRTLTDRDPTAHAEILALRQAAQVI 65

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
             E L + DLYVTLEPCTMCA AIS ARIRRLYYGA++PKGG +E+G +F+   TCHH P
Sbjct: 66  GSERLVDCDLYVTLEPCTMCAGAISFARIRRLYYGAADPKGGAVESGVRFFAAPTCHHVP 125

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+Y  + EQ++ ++++ FFK RR
Sbjct: 126 EVYSAVGEQQAAEMLKAFFKARR 148


>gi|282879130|ref|ZP_06287889.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Prevotella buccalis ATCC 35310]
 gi|281298772|gb|EFA91182.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Prevotella buccalis ATCC 35310]
          Length = 181

 Score =  211 bits (538), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 61/148 (41%), Positives = 83/148 (56%), Gaps = 5/148 (3%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           K+   FM  AL EA  A    E+P+GAV     +II+RA N+   L DVTAHAE+LAI  
Sbjct: 39  KQDEQFMQKALAEAHAAYDEGEVPIGAVITCQGRIIARAHNQTETLNDVTAHAEMLAITA 98

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
               L  + LP+  LYVT+EPC MCA A+  A++ R+ YGA + K G      Q Y    
Sbjct: 99  AAAQLGGKYLPQCTLYVTVEPCPMCAGAMGWAQVSRIVYGAGDDKRG-----YQRYAPNV 153

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            H    +  G+ E+  +Q++Q FFK +R
Sbjct: 154 LHTKATVTGGVLEEECKQLMQQFFKAKR 181


>gi|153207852|ref|ZP_01946429.1| tRNA-specific adenosine deaminase [Coxiella burnetii 'MSU Goat
           Q177']
 gi|154706920|ref|YP_001424041.1| tRNA-specific adenosine deaminase [Coxiella burnetii Dugway
           5J108-111]
 gi|161830554|ref|YP_001596549.1| tRNA-specific adenosine deaminase [Coxiella burnetii RSA 331]
 gi|165918843|ref|ZP_02218929.1| tRNA-specific adenosine deaminase [Coxiella burnetii RSA 334]
 gi|212212896|ref|YP_002303832.1| tRNA-specific adenosine deaminase [Coxiella burnetii CbuG_Q212]
 gi|212219141|ref|YP_002305928.1| tRNA-specific adenosine deaminase [Coxiella burnetii CbuK_Q154]
 gi|215919009|ref|NP_819652.2| zinc-binding domain-containing protein [Coxiella burnetii RSA 493]
 gi|120576278|gb|EAX32902.1| tRNA-specific adenosine deaminase [Coxiella burnetii 'MSU Goat
           Q177']
 gi|154356206|gb|ABS77668.1| tRNA-specific adenosine deaminase [Coxiella burnetii Dugway
           5J108-111]
 gi|161762421|gb|ABX78063.1| tRNA-specific adenosine deaminase [Coxiella burnetii RSA 331]
 gi|165917475|gb|EDR36079.1| tRNA-specific adenosine deaminase [Coxiella burnetii RSA 334]
 gi|206583894|gb|AAO90166.2| tRNA-specific adenosine deaminase [Coxiella burnetii RSA 493]
 gi|212011306|gb|ACJ18687.1| tRNA-specific adenosine deaminase [Coxiella burnetii CbuG_Q212]
 gi|212013403|gb|ACJ20783.1| tRNA-specific adenosine deaminase [Coxiella burnetii CbuK_Q154]
          Length = 148

 Score =  211 bits (538), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 56/147 (38%), Positives = 80/147 (54%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
              +FM  AL  A+ A   NE+P+GAV V  N+I+    N    L D TAHAEILA+R  
Sbjct: 2   TDELFMHEALALAKKANENNEVPIGAVLVKENEIVGHGFNEPITLNDPTAHAEILALRNA 61

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
            + +    L +  LYVTLEPC MC  A+  ARI+RL +GA +P+ G +E+  Q       
Sbjct: 62  AKRVGNYRLVDTTLYVTLEPCAMCVGAMIQARIKRLVFGAFDPRAGAVESVFQLLNEPRL 121

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H      G+  +   + ++ FF+ RR
Sbjct: 122 NHRIVWTSGVIAEACAEPLKAFFRARR 148


>gi|254804815|ref|YP_003083036.1| probable cytidine deaminase [Neisseria meningitidis alpha14]
 gi|304387765|ref|ZP_07369945.1| tRNA-specific adenosine deaminase [Neisseria meningitidis ATCC
           13091]
 gi|254668357|emb|CBA05413.1| probable cytidine deaminase [Neisseria meningitidis alpha14]
 gi|254671348|emb|CBA08775.1| putative hydrolase protein [Neisseria meningitidis alpha153]
 gi|304338241|gb|EFM04371.1| tRNA-specific adenosine deaminase [Neisseria meningitidis ATCC
           13091]
 gi|319410268|emb|CBY90609.1| K01485 cytosine deaminase [Neisseria meningitidis WUE 2594]
          Length = 239

 Score =  211 bits (538), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 55/148 (37%), Positives = 81/148 (54%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           ++   FM  AL +A+ +A   EIPVGAV V + KII+ A N      +V+ HAEI A+  
Sbjct: 90  EEMEHFMREALRQAEQSAADGEIPVGAVIVSDGKIIASAHNTCIADCNVSRHAEINALAQ 149

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
               +    L   D+Y+TLEPC MCA+A+  ARIRR+ YGA+ PK G   +    +    
Sbjct: 150 AGSEMQNYRLDGCDIYITLEPCAMCASALIQARIRRVIYGAAEPKTGAAGSIVNLFADKR 209

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +    I  GI ++  R ++  FF+ +R
Sbjct: 210 LNTHTAIRGGILQEECRAVLSRFFQNKR 237


>gi|288906283|ref|YP_003431505.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus
           gallolyticus UCN34]
 gi|306832338|ref|ZP_07465492.1| tRNA-specific adenosine deaminase [Streptococcus gallolyticus
           subsp. gallolyticus TX20005]
 gi|325979296|ref|YP_004289012.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus
           gallolyticus subsp. gallolyticus ATCC BAA-2069]
 gi|288733009|emb|CBI14590.1| putative cytidine/deoxycytidylate deaminase family protein
           [Streptococcus gallolyticus UCN34]
 gi|304425777|gb|EFM28895.1| tRNA-specific adenosine deaminase [Streptococcus gallolyticus
           subsp. gallolyticus TX20005]
 gi|325179224|emb|CBZ49268.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus
           gallolyticus subsp. gallolyticus ATCC BAA-2069]
          Length = 168

 Score =  211 bits (538), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 59/148 (39%), Positives = 80/148 (54%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           ++   FM  AL+EAQ +  + EIP+G V V N  II R  N   E +    HAEI+AI  
Sbjct: 7   EEKEYFMREALKEAQKSLAKEEIPIGCVIVKNGVIIGRGHNAREERQKAILHAEIMAIDD 66

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
                    L +  L+VT+EPC MC+ AI LARI ++ YGA+N K GG  +     T   
Sbjct: 67  ANENEGSWRLLDSTLFVTIEPCVMCSGAIGLARIPQVIYGAANQKFGGAGSLYDILTDVR 126

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H  E+  GI E     I+QDFF++ R
Sbjct: 127 LNHRVEVETGILETECAAIMQDFFRKNR 154


>gi|225023945|ref|ZP_03713137.1| hypothetical protein EIKCOROL_00812 [Eikenella corrodens ATCC
           23834]
 gi|224942970|gb|EEG24179.1| hypothetical protein EIKCOROL_00812 [Eikenella corrodens ATCC
           23834]
          Length = 254

 Score =  211 bits (538), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 58/148 (39%), Positives = 77/148 (52%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           ++   +M  AL+ A+ A    E+PVGAV V   +II R  N       V  HAEI A+  
Sbjct: 105 EESEHWMQQALQLAEQALAAGEVPVGAVVVRRGEIIGRGANACVTEHSVCRHAEIAALTE 164

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
             R L    L   DLYVTLEPC+MCA AI  +RIRRL Y A+ PK G   +    +    
Sbjct: 165 AGRRLGNYRLDGCDLYVTLEPCSMCAGAIMQSRIRRLIYAAAEPKTGAAGSMLDLFANKQ 224

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +    +  G+    S Q++Q FF+ERR
Sbjct: 225 LNPHTAVQGGVLAAESAQLLQRFFQERR 252


>gi|313889859|ref|ZP_07823501.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Streptococcus pseudoporcinus SPIN 20026]
 gi|313121904|gb|EFR45001.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Streptococcus pseudoporcinus SPIN 20026]
          Length = 174

 Score =  211 bits (538), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 58/148 (39%), Positives = 82/148 (55%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           ++   FM  AL+EA+ + ++ EIP+G V V + KII R  N   EL     HAEI+AI  
Sbjct: 7   EEKEFFMREALKEAEKSLVKAEIPIGCVIVKDGKIIGRGHNAREELNQAIMHAEIMAINE 66

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
                    L E  L+VT+EPC MC+ AI LARI  + +GA N K GG  +  Q  T   
Sbjct: 67  ANAHEKNWRLLETSLFVTIEPCVMCSGAIGLARIPHVVFGAPNQKFGGAGSLYQILTDQR 126

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H  E+  G+ E    +++QDFF++ R
Sbjct: 127 LNHRVELESGLLEAECAKMMQDFFRQGR 154


>gi|114705782|ref|ZP_01438685.1| CMP/dCMP deaminase, zinc-binding protein [Fulvimarina pelagi
           HTCC2506]
 gi|114538628|gb|EAU41749.1| CMP/dCMP deaminase, zinc-binding protein [Fulvimarina pelagi
           HTCC2506]
          Length = 148

 Score =  211 bits (538), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 87/143 (60%), Positives = 108/143 (75%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  ALEEA+ AA R E+PVGAV V + +II++AGN  R  KD TAHAE+LAIR  C  L
Sbjct: 5   FMDEALEEARRAATRGEVPVGAVIVRDGEIIAKAGNETRAAKDPTAHAELLAIRRACLAL 64

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
             E L + DLYVTLEPC MCA AIS ARIRRLY+GA++PKGG +ENG +F++ +TCHH+P
Sbjct: 65  EAERLTDCDLYVTLEPCAMCAGAISFARIRRLYFGAADPKGGAVENGARFFSQSTCHHAP 124

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           EIY G+SE  S  +++ FF ERR
Sbjct: 125 EIYSGLSETASADLLKAFFAERR 147


>gi|307245435|ref|ZP_07527523.1| tRNA-specific adenosine deaminase [Actinobacillus pleuropneumoniae
           serovar 1 str. 4074]
 gi|307254389|ref|ZP_07536227.1| tRNA-specific adenosine deaminase [Actinobacillus pleuropneumoniae
           serovar 9 str. CVJ13261]
 gi|307258848|ref|ZP_07540580.1| tRNA-specific adenosine deaminase [Actinobacillus pleuropneumoniae
           serovar 11 str. 56153]
 gi|306853776|gb|EFM85993.1| tRNA-specific adenosine deaminase [Actinobacillus pleuropneumoniae
           serovar 1 str. 4074]
 gi|306862688|gb|EFM94644.1| tRNA-specific adenosine deaminase [Actinobacillus pleuropneumoniae
           serovar 9 str. CVJ13261]
 gi|306867199|gb|EFM99055.1| tRNA-specific adenosine deaminase [Actinobacillus pleuropneumoniae
           serovar 11 str. 56153]
          Length = 196

 Score =  211 bits (538), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 60/145 (41%), Positives = 78/145 (53%), Gaps = 1/145 (0%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIR 60
           ++   FM  ALE A  A    EIPVGAV V     II    N+  +L D +AHAE+LAIR
Sbjct: 38  EQDIHFMRYALELADRAEAIGEIPVGAVLVDQEGNIIGEGWNQVIQLSDPSAHAEMLAIR 97

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              ++     L +  LY TLEPCTMCA AI  +R+RRL +GAS+ K G I +    +   
Sbjct: 98  QAGKVQRNYRLLDCTLYATLEPCTMCAGAILHSRLRRLVFGASDYKTGAIGSRFHLFEDY 157

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFF 145
             +H  EI  G+  +   Q I  FF
Sbjct: 158 KMNHFLEIRGGVLAEECSQKISRFF 182


>gi|113461754|ref|YP_719823.1| tRNA-adenosine deaminase [Haemophilus somnus 129PT]
 gi|112823797|gb|ABI25886.1| tRNA-adenosine deaminase [Haemophilus somnus 129PT]
          Length = 158

 Score =  211 bits (538), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 59/143 (41%), Positives = 78/143 (54%), Gaps = 1/143 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  AL  A  A    EIPVGAV V     I++   N +    D TAHAEI+A+R   + L
Sbjct: 2   MRYALSLADKAEALGEIPVGAVLVDKQGDILAEGWNLSIIHNDPTAHAEIIALRQAGQKL 61

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  LYVTLEPCTMCA AI  +RI RL +GA + K G + +   F+     +H  
Sbjct: 62  QNYRLLDTTLYVTLEPCTMCAGAILHSRIGRLVFGAYDYKTGAVGSRFHFFNDYKMNHIL 121

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           EI  G+ ++   Q I  FF++RR
Sbjct: 122 EITGGVLQEECSQKISVFFQKRR 144


>gi|116511524|ref|YP_808740.1| hypothetical protein LACR_0760 [Lactococcus lactis subsp. cremoris
           SK11]
 gi|116107178|gb|ABJ72318.1| tRNA-adenosine deaminase [Lactococcus lactis subsp. cremoris SK11]
          Length = 155

 Score =  211 bits (538), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 62/148 (41%), Positives = 87/148 (58%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           ++   FM+ AL+EAQ AA   E+P+G V V + +II+R  NR       T HAE+ AI  
Sbjct: 6   EEKEFFMTEALKEAQKAAENEEVPIGVVIVKDGEIIARDFNRRELDGRATHHAEVCAIEA 65

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
             + +    L +  L+VT+EPC MCA AI LARI ++Y+GA+NPK GG  +  Q      
Sbjct: 66  ANQAVGNWRLLDCALFVTIEPCVMCAGAIGLARIPQVYFGATNPKFGGTVSLYQILEDKR 125

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H  ++  GI E    +I+QDFFK RR
Sbjct: 126 LNHRVQVESGILEYECAKIMQDFFKNRR 153


>gi|332289514|ref|YP_004420366.1| tRNA-specific adenosine deaminase [Gallibacterium anatis UMN179]
 gi|330432410|gb|AEC17469.1| tRNA-specific adenosine deaminase [Gallibacterium anatis UMN179]
          Length = 153

 Score =  211 bits (538), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 61/143 (42%), Positives = 81/143 (56%), Gaps = 1/143 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  AL  A NAA+  EIPVGAV V     I++   N++  L D TAHAEI+A+R   + L
Sbjct: 1   MQYALALADNAAMMGEIPVGAVLVDEQGNIVAEGWNQSITLSDPTAHAEIMALRQAGQKL 60

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L  + LYVTLEPC MCA AI  +RI+RL +GAS+ K G I +    +     +H  
Sbjct: 61  QNYRLLNLTLYVTLEPCPMCAGAILHSRIKRLVFGASDYKTGAIGSRFHLFEDYRMNHIV 120

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           EI  G+  +     I  FF++RR
Sbjct: 121 EITAGVLAEECSAKISQFFQKRR 143


>gi|225011298|ref|ZP_03701754.1| CMP/dCMP deaminase zinc-binding [Flavobacteria bacterium MS024-3C]
 gi|225004554|gb|EEG42520.1| CMP/dCMP deaminase zinc-binding [Flavobacteria bacterium MS024-3C]
          Length = 166

 Score =  211 bits (538), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 61/156 (39%), Positives = 88/156 (56%), Gaps = 9/156 (5%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
               FM  AL EA +A  + E+PVGA+ V N++II+R  N   +L DVTAHAE+ AI   
Sbjct: 11  TDAYFMKLALAEAAHAFEKGEVPVGALVVANDRIIARGHNLTEQLTDVTAHAEMQAITAA 70

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIE---------NG 113
              L  + L    LYVTLEPC MCA A+  ++I ++ YGAS+PK GG+          + 
Sbjct: 71  AHHLGGKYLHNCTLYVTLEPCLMCAGALYWSQISKVVYGASDPKRGGLSVYSQHQASLSV 130

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
            Q +  +  H   E+  G+    + Q++QDFF ++R
Sbjct: 131 PQSHPPSPLHPKTEVIGGVMATEATQLLQDFFAKKR 166


>gi|187478486|ref|YP_786510.1| zinc-binding cytidine/deoxycytidylate deaminase [Bordetella avium
           197N]
 gi|115423072|emb|CAJ49603.1| putative zinc-binding cytidine/deoxycytidylate deaminase
           [Bordetella avium 197N]
          Length = 157

 Score =  211 bits (538), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 54/147 (36%), Positives = 82/147 (55%), Gaps = 1/147 (0%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMG 62
             ++M  ALE+A+ A  + E+PVGAV V    +++    NR     D TAHAE++A+R  
Sbjct: 5   DEIYMHMALEQARLAYDQGEVPVGAVVVDGEGRVLGAGYNRTILDSDPTAHAEVMALRAA 64

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
            R L+   LP + LYVTLEPC MC  A+  AR+ R+ +GA +PK G   +      +A  
Sbjct: 65  SRHLANYRLPGLTLYVTLEPCVMCIGAMLHARLTRVVFGAHDPKTGACGSVLDVGAVAQL 124

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H   +  G+       +++ FF+ERR
Sbjct: 125 NHHTTVVGGVLAPPCGDLLRAFFRERR 151


>gi|320527136|ref|ZP_08028323.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Solobacterium moorei F0204]
 gi|320132464|gb|EFW25007.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Solobacterium moorei F0204]
          Length = 164

 Score =  211 bits (538), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 57/145 (39%), Positives = 83/145 (57%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           MK    +M  ALEEA+ A   +E+PVG V V + ++ISR  N   +L    AHAE++AI+
Sbjct: 1   MKTHEEYMELALEEARKAEEIDEVPVGCVIVCDGEVISRGHNLKEQLNQAYAHAEMMAIQ 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
               +     L + DLYVTLEPC MC   I+L+RIR +YYG  +PKGG +E       + 
Sbjct: 61  KAAEVKGNWCLNDCDLYVTLEPCMMCTGIINLSRIRTVYYGTQDPKGGCLETVIDLKKIN 120

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFF 145
             +H P I   I ++   +I+ ++F
Sbjct: 121 RLNHYPNIVGNILQKECSEILTNYF 145


>gi|307249782|ref|ZP_07531760.1| tRNA-specific adenosine deaminase [Actinobacillus pleuropneumoniae
           serovar 4 str. M62]
 gi|306858197|gb|EFM90275.1| tRNA-specific adenosine deaminase [Actinobacillus pleuropneumoniae
           serovar 4 str. M62]
          Length = 196

 Score =  211 bits (538), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 61/145 (42%), Positives = 80/145 (55%), Gaps = 1/145 (0%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIR 60
           ++   FM  ALE A  A +  EIPVGAV V     II    N+  +L D +AHAE+LAIR
Sbjct: 38  EQDIHFMQYALELADRAEVIGEIPVGAVLVDQEGNIIGEGWNQVIQLSDPSAHAEMLAIR 97

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              ++     L +  LYVTLEPCTMCA AI  +R+RRL +GAS+ K G I +    +   
Sbjct: 98  QAGKVQRNYRLLDCTLYVTLEPCTMCAGAILHSRLRRLVFGASDYKTGAIGSRFHLFEDY 157

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFF 145
             +H  EI  G+  +   Q I  FF
Sbjct: 158 KMNHFLEIRGGVLAEECSQKISRFF 182


>gi|227328190|ref|ZP_03832214.1| tRNA-specific adenosine deaminase [Pectobacterium carotovorum
           subsp. carotovorum WPP14]
          Length = 158

 Score =  211 bits (538), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 61/142 (42%), Positives = 75/142 (52%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  AL  AQ A    E+PVGAV VL+N+ I    NR     D TAHAEI+A+R G ++L 
Sbjct: 1   MRYALTLAQRAQDEGEVPVGAVLVLDNEAIGEGWNRPIGHHDPTAHAEIMALRQGGQVLQ 60

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
              L E  LYVTLEPC MCA A+  +RI RL YGAS+ K G   +          +H   
Sbjct: 61  NYRLLETTLYVTLEPCIMCAGAMIHSRIGRLVYGASDEKTGAAGSLVDILRHPGMNHQIV 120

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
           I  GI        +  FF+ RR
Sbjct: 121 IESGILADECSATLSAFFRLRR 142


>gi|313848259|emb|CBY17260.1| putative cytidine/deoxycytidylate deaminase family protein
           [Chlamydophila psittaci RD1]
 gi|328914938|gb|AEB55771.1| cytidine/deoxycytidylate deaminase family protein [Chlamydophila
           psittaci 6BC]
          Length = 157

 Score =  211 bits (538), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 59/149 (39%), Positives = 84/149 (56%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           ++K   FM+ AL+EA+ A   +E+PVG V V +NKII+R  N   +L+D TAHAEIL I 
Sbjct: 3   IEKDIFFMNQALKEARQAYDEDEVPVGCVIVKDNKIIARGHNTTEKLQDPTAHAEILCIG 62

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              + L    L +  LY TLEPC MCA AI  ARIRR+ + A + + G   +    +   
Sbjct: 63  AAAQYLENWRLVDTVLYCTLEPCLMCAGAIQQARIRRIVWAAPDLRLGAGGSWINVFKEK 122

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
              H  E   GI  + + Q+++ FF  +R
Sbjct: 123 HPFHQVECCSGICREDAEQLMKQFFIGKR 151


>gi|224025750|ref|ZP_03644116.1| hypothetical protein BACCOPRO_02491 [Bacteroides coprophilus DSM
           18228]
 gi|224018986|gb|EEF76984.1| hypothetical protein BACCOPRO_02491 [Bacteroides coprophilus DSM
           18228]
          Length = 144

 Score =  211 bits (538), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 63/149 (42%), Positives = 84/149 (56%), Gaps = 5/149 (3%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M     +M  AL+EA+ AA R E+PVGAV V  ++II+RA N    L DVTAHAE+ AI 
Sbjct: 1   MADDTYYMRQALQEAREAANRGEVPVGAVVVCRDRIIARAHNLTETLTDVTAHAEMQAIT 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
                L  + L    LYVT+EPC MCA AI+ A+  RL YGA + K G      Q Y   
Sbjct: 61  AAAGWLGGKYLNNCTLYVTIEPCVMCAGAIAWAQTGRLVYGADDEKRG-----FQRYAPQ 115

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             H   ++  G+      Q+++DFF++RR
Sbjct: 116 ALHPKTQVTSGVLADECAQLMKDFFQKRR 144


>gi|297172082|gb|ADI23064.1| cytosine/adenosine deaminases [uncultured gamma proteobacterium
           HF0770_07M15]
          Length = 150

 Score =  211 bits (538), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 56/142 (39%), Positives = 80/142 (56%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  A+ +A  A   +E+PVGAV V    +I+RA N+   LKD TAHAE++A+      + 
Sbjct: 1   MQAAIRQAVKAYEEDEVPVGAVVVREGAVIARAWNQVELLKDATAHAEMIALTAAEAAVG 60

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
              L    LYVT EPC MCA A+   RI R+ +GA++P+GG            T +H+ +
Sbjct: 61  DWRLTGCTLYVTKEPCPMCAGALVHCRIDRVVFGATDPRGGAAGGAMNLLQFPTLNHACD 120

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
           I  G+ E   R ++Q FFKE+R
Sbjct: 121 ITGGVMEPDCRNLLQTFFKEKR 142


>gi|323340129|ref|ZP_08080393.1| tRNA-specific adenosine deaminase [Lactobacillus ruminis ATCC
           25644]
 gi|323092320|gb|EFZ34928.1| tRNA-specific adenosine deaminase [Lactobacillus ruminis ATCC
           25644]
          Length = 153

 Score =  211 bits (538), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 57/151 (37%), Positives = 75/151 (49%), Gaps = 2/151 (1%)

Query: 1   MKKGNV--FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           M +     FM  AL+EA++A    E+P+G V V   +II R  NR  EL+D T HAE++A
Sbjct: 1   MTEEEKIAFMKEALKEAKSAYEAGEVPIGCVIVSGGRIIGRGHNRREELQDATEHAEMIA 60

Query: 59  IRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
           IR   R L    L    L+VTLEPC MC  AI  ARI  ++YGA + K G          
Sbjct: 61  IREANRTLGSFRLENCALFVTLEPCPMCTGAIINARIPEVFYGAPDEKAGTCGTLMNLLG 120

Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
               +H   I  G       +++ DFF   R
Sbjct: 121 DERFNHRASIEKGCLGNECGKLLSDFFASLR 151


>gi|184199963|ref|YP_001854170.1| putative deaminase [Kocuria rhizophila DC2201]
 gi|183580193|dbj|BAG28664.1| putative tRNA-specific adenosine deaminase [Kocuria rhizophila
           DC2201]
          Length = 158

 Score =  211 bits (538), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 51/146 (34%), Positives = 75/146 (51%), Gaps = 1/146 (0%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
             +M  AL EA   A   ++P+GAV +  + ++I    NR  E  D TAHAE+LA+R   
Sbjct: 13  EGWMDLALSEAALTAASGDVPIGAVVLDTDGRVIGTGRNRREECGDPTAHAEVLALREAA 72

Query: 64  RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123
               +  L    L VTLEPC MCA A+ LAR+  + +GA +PK G   +          +
Sbjct: 73  AHRGEWRLEGCTLVVTLEPCAMCAGAVVLARVPTVVFGAWDPKAGACGSVFDIVRDPRLN 132

Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149
           H  E+  G+ E     +++DFF+  R
Sbjct: 133 HWVEVTGGVREDECAALLRDFFRTHR 158


>gi|148244957|ref|YP_001219651.1| hypothetical protein COSY_0821 [Candidatus Vesicomyosocius okutanii
           HA]
 gi|146326784|dbj|BAF61927.1| conserved hypothetical protein [Candidatus Vesicomyosocius okutanii
           HA]
          Length = 153

 Score =  211 bits (538), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 56/144 (38%), Positives = 80/144 (55%)

Query: 6   VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
            +M+ A+E+A+ A    EIPVGA+ + NN++I  A N+     D TAHAEI  +R+  + 
Sbjct: 7   AWMTLAIEQAKQAQQIGEIPVGAILIQNNQLIGGAHNQTILNNDPTAHAEIQLLRIAGKK 66

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           L+   L    LYVTLEPCTMC  AI  ARI  + +GA + K G   +          +H 
Sbjct: 67  LNNYRLSGTTLYVTLEPCTMCLGAIVHARISCIVFGAYDKKSGACGSCIDLLNNRCFNHL 126

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
             I  GI   + + ++QDFFK +R
Sbjct: 127 ISIKSGILADQCKNLLQDFFKNKR 150


>gi|169824845|ref|YP_001692456.1| putative deaminase [Finegoldia magna ATCC 29328]
 gi|167831650|dbj|BAG08566.1| putative deaminase [Finegoldia magna ATCC 29328]
          Length = 155

 Score =  210 bits (537), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 48/148 (32%), Positives = 77/148 (52%), Gaps = 1/148 (0%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
                FM  A+E+A+ A   +E+PVG V V N +II++A N      + T HAE+ AI  
Sbjct: 3   NNDEKFMIKAIEQARIAFDMDEVPVGCVIVKNGEIIAQAYNSVETDNNATMHAELKAINQ 62

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
             +++    L +  +YVTLEPC MC  A+  +RI ++ +GA + K G   +         
Sbjct: 63  ATQVIGNFRLDDCTMYVTLEPCVMCTGALVYSRIPKVVFGAFDKKRGACGSLLSLNDYEG 122

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H  E+   I E+   +++Q FF+  R
Sbjct: 123 LNHKIEVKS-IMEKECVELMQSFFRRIR 149


>gi|261868753|ref|YP_003256675.1| tRNA-specific adenosine deaminase [Aggregatibacter
           actinomycetemcomitans D11S-1]
 gi|261414085|gb|ACX83456.1| tRNA-specific adenosine deaminase [Aggregatibacter
           actinomycetemcomitans D11S-1]
          Length = 175

 Score =  210 bits (537), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 60/147 (40%), Positives = 81/147 (55%), Gaps = 1/147 (0%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMG 62
              FM  AL  A  A    EIPVGAV V    +II    N +    D TAHAEI+ +R G
Sbjct: 9   DEKFMHHALMLAGKAEALGEIPVGAVLVSEAGEIIGEGWNLSIIHSDPTAHAEIVTLRQG 68

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
            + L    L    LYVTLEPCTMCA AI  +RI+RL +GA++ K G + +   F+     
Sbjct: 69  GQKLQNYRLLNTTLYVTLEPCTMCAGAILHSRIKRLVFGAADYKTGAVGSRFHFFDDYKM 128

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H+ EI  G+ +Q   + +  FF++RR
Sbjct: 129 NHAIEITGGVLQQECSEKLSAFFQKRR 155


>gi|171777570|ref|ZP_02919258.1| hypothetical protein STRINF_00093 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
 gi|171283179|gb|EDT48603.1| hypothetical protein STRINF_00093 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
          Length = 168

 Score =  210 bits (537), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 58/148 (39%), Positives = 80/148 (54%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           ++   FM  AL+EAQ +  + EIP+G V V N  II R  N   E +    HAEI+AI  
Sbjct: 7   EEKEYFMREALKEAQKSLAKEEIPIGCVIVKNGDIIGRGHNAREERQKAILHAEIMAIDD 66

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
                    L +  L+VT+EPC MC+ AI LAR+ ++ YGA+N K GG  +     T   
Sbjct: 67  ANENEGSWRLLDSTLFVTIEPCVMCSGAIGLARVPQVIYGAANQKFGGAGSLYDILTDVR 126

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H  E+  GI E     I+QDFF++ R
Sbjct: 127 LNHRVEVETGILETECAAIMQDFFRKNR 154


>gi|511885|gb|AAA96138.1| nitrogen fixation protein [Bradyrhizobium japonicum]
          Length = 142

 Score =  210 bits (537), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 72/142 (50%), Positives = 102/142 (71%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  AL+ A+NA    E+P+G V V N ++I+ A NR     D TAHAEI+A+R   + + 
Sbjct: 1   MDLALKTAENAGKAGEVPIGCVVVRNYEVIATAANRTLTDYDPTAHAEIVALREAAKKIG 60

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
            E L + DLYVTLEPCTMCA AIS AR+RRLYYGA++PKGG +E+G +F+   TCHH+P+
Sbjct: 61  SERLVDCDLYVTLEPCTMCAGAISFARVRRLYYGAADPKGGAVESGVRFFASPTCHHAPD 120

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
           +Y G+ E  + +++++FF+ERR
Sbjct: 121 VYSGVGESEAARLLKEFFRERR 142


>gi|197335350|ref|YP_002155408.1| tRNA-specific adenosine deaminase [Vibrio fischeri MJ11]
 gi|197316840|gb|ACH66287.1| tRNA-specific adenosine deaminase [Vibrio fischeri MJ11]
          Length = 174

 Score =  210 bits (537), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 59/144 (40%), Positives = 82/144 (56%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           +  + +M  A+E A  A    E+PVGAV VL+++II    NR+    D TAHAE++AI+ 
Sbjct: 8   RDASFYMQRAMELAAIAEQEGEVPVGAVIVLDDEIIGEGWNRSISTHDATAHAEMMAIKQ 67

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
               +    L +  LYVTLEPC MCA AI  +RI+R+ +GAS+ K G   +    +T AT
Sbjct: 68  AGSKIENYRLVDATLYVTLEPCPMCAGAIVHSRIKRVIFGASDMKTGASGSVINLFTSAT 127

Query: 122 CHHSPEIYPGISEQRSRQIIQDFF 145
             HS E   G+ E   R  +Q FF
Sbjct: 128 AFHSVECESGVMEDACRSQLQAFF 151


>gi|194289718|ref|YP_002005625.1| tRNA-specific adenosine deaminase [Cupriavidus taiwanensis LMG
           19424]
 gi|193223553|emb|CAQ69558.1| tRNA-specific adenosine deaminase [Cupriavidus taiwanensis LMG
           19424]
          Length = 194

 Score =  210 bits (537), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 57/144 (39%), Positives = 84/144 (58%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           ++   +M  ALEEA+ A    E+PVGAV V N+ II+R  N      D +AHAE+ A+R 
Sbjct: 24  ERDARYMRAALEEARLAEAAGEVPVGAVVVWNDTIIARGHNLPIRSVDPSAHAEMQALRA 83

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
             +++    +PE +LYVTLEPC MC+ AI  AR+R + +GAS+PK G   +    +  A 
Sbjct: 84  AAQVIGNYRMPECELYVTLEPCAMCSGAILHARLRHVVFGASDPKTGAAGSVVNLFEQAQ 143

Query: 122 CHHSPEIYPGISEQRSRQIIQDFF 145
            +H   I  G+      Q+++DFF
Sbjct: 144 LNHQTTIAGGVLADPCGQMLKDFF 167


>gi|28897437|ref|NP_797042.1| YfhC protein [Vibrio parahaemolyticus RIMD 2210633]
 gi|28805649|dbj|BAC58926.1| YfhC protein [Vibrio parahaemolyticus RIMD 2210633]
          Length = 161

 Score =  210 bits (537), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 54/142 (38%), Positives = 77/142 (54%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  AL  A+ A L  E+PVGAV V + ++I+   NR+    D TAHAEI  +R    +L 
Sbjct: 1   MRRALALAEQAELEGEVPVGAVLVKDGEVIAEGWNRSICSHDATAHAEIQTLRNAGAVLE 60

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
              L +  LYVTLEPC MCA A+  +R++R+ +GA + K G        +     +H   
Sbjct: 61  NYRLLDTTLYVTLEPCPMCAGALLHSRVKRVVFGAPDLKAGAAGTVLNLFESQAAYHYAT 120

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
           +  G+ E   R+ +Q FFK RR
Sbjct: 121 VEKGLLEDECREQLQAFFKRRR 142


>gi|166154188|ref|YP_001654306.1| cytosine deaminase [Chlamydia trachomatis 434/Bu]
 gi|166155063|ref|YP_001653318.1| cytosine deaminase [Chlamydia trachomatis L2b/UCH-1/proctitis]
 gi|255311685|ref|ZP_05354255.1| cytosine deaminase [Chlamydia trachomatis 6276]
 gi|255317986|ref|ZP_05359232.1| cytosine deaminase [Chlamydia trachomatis 6276s]
 gi|255349249|ref|ZP_05381256.1| cytosine deaminase [Chlamydia trachomatis 70]
 gi|255503786|ref|ZP_05382176.1| cytosine deaminase [Chlamydia trachomatis 70s]
 gi|255507467|ref|ZP_05383106.1| cytosine deaminase [Chlamydia trachomatis D(s)2923]
 gi|301335433|ref|ZP_07223677.1| cytosine deaminase [Chlamydia trachomatis L2tet1]
 gi|165930176|emb|CAP03660.1| Cytosine deaminase [Chlamydia trachomatis 434/Bu]
 gi|165931051|emb|CAP06614.1| Cytosine deaminase [Chlamydia trachomatis L2b/UCH-1/proctitis]
 gi|289525890|emb|CBJ15372.1| Cytosine deaminase [Chlamydia trachomatis Sweden2]
 gi|296435476|gb|ADH17654.1| cytosine deaminase [Chlamydia trachomatis E/150]
 gi|296437331|gb|ADH19501.1| cytosine deaminase [Chlamydia trachomatis G/11222]
 gi|296439193|gb|ADH21346.1| cytosine deaminase [Chlamydia trachomatis E/11023]
          Length = 163

 Score =  210 bits (537), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 59/149 (39%), Positives = 85/149 (57%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           ++K   FM  AL+EA+ A  ++E+PVG + V  +KII+R  N   +LKD TAHAE++ I 
Sbjct: 3   IEKDLFFMKKALDEARKAYEQDEVPVGCIIVHGDKIIARGHNSVEQLKDPTAHAEMICIS 62

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
                L    L +  LY TLEPC MCA AI LARI R+ +GA + + G   +    +   
Sbjct: 63  AAAEYLENWRLKDTILYCTLEPCLMCAGAIQLARIPRIVWGAPDLRLGAGGSWLNVFLEK 122

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
              H  E   G+  Q S Q++++FF E+R
Sbjct: 123 HPFHQVECCSGVCYQESEQLMKNFFLEKR 151


>gi|258540446|ref|YP_003174945.1| CMP/dCMP deaminase zinc-binding [Lactobacillus rhamnosus Lc 705]
 gi|257152122|emb|CAR91094.1| CMP/dCMP deaminase, zinc-binding [Lactobacillus rhamnosus Lc 705]
          Length = 168

 Score =  210 bits (537), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 61/145 (42%), Positives = 80/145 (55%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           N +M  AL EA+ AA   E+P+GAV V + +II R  N     +D T HAEILAI+  CR
Sbjct: 7   NQYMIAALVEAKKAAAIGEVPIGAVVVHDQQIIGRGYNLRETTQDATQHAEILAIQAACR 66

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
            L    L +  L+VTLEPC MCA A+  ARI   Y+GA++PK G              +H
Sbjct: 67  QLGTWRLEDCSLFVTLEPCPMCAGAMINARIATCYFGATDPKAGVAGTFYNLLEDTRFNH 126

Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149
              + PGI    S  ++QDFF+  R
Sbjct: 127 QVAVVPGIQATASAALLQDFFRAIR 151


>gi|150395640|ref|YP_001326107.1| CMP/dCMP deaminase zinc-binding [Sinorhizobium medicae WSM419]
 gi|150027155|gb|ABR59272.1| CMP/dCMP deaminase zinc-binding [Sinorhizobium medicae WSM419]
          Length = 149

 Score =  210 bits (537), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 84/149 (56%), Positives = 107/149 (71%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M     FM  AL+EA+ AA R E+P+GAV V   ++++ AGNR REL D+TAHAEI AIR
Sbjct: 1   MTDTAPFMQAALQEARKAAARGEVPIGAVIVHEGEVVAAAGNRTRELNDITAHAEIEAIR 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
           M    +  E L   DLYVTLEPCTMCAAAIS ARIRRLYYGA +PKGG ++NG +FY+  
Sbjct: 61  MAATAIGGERLSGADLYVTLEPCTMCAAAISFARIRRLYYGAEDPKGGAVDNGVRFYSSP 120

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
           TCHH P++Y G++E+ +  I++ FF  RR
Sbjct: 121 TCHHVPDVYSGLAEREAADILRAFFAARR 149


>gi|15618909|ref|NP_225195.1| cytosine deaminase [Chlamydophila pneumoniae CWL029]
 gi|16752024|ref|NP_445390.1| cytidine/deoxycytidylate deaminase family protein [Chlamydophila
           pneumoniae AR39]
 gi|4377331|gb|AAD19138.1| cytosine deaminase [Chlamydophila pneumoniae CWL029]
 gi|8163513|gb|AAF73712.1| cytidine/deoxycytidylate deaminase family protein [Chlamydophila
           pneumoniae AR39]
          Length = 155

 Score =  210 bits (537), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 59/149 (39%), Positives = 85/149 (57%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M+K   FM  A +EA+ A  ++E+PVG V V ++KII+RA N   +LKD TAHAEIL I 
Sbjct: 1   MEKDIFFMQQAFKEARKAYDQDEVPVGCVIVKDDKIIARAHNSVEKLKDATAHAEILCIG 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              + L    L +  LY TLEPC MCA AI LARI R+ + A + + G   +    +T  
Sbjct: 61  SAAQDLDNWRLLDTVLYCTLEPCLMCAGAIQLARIPRIVWAAPDVRLGAGGSWVNIFTEE 120

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
              H+     G+  + +  +++ FF E+R
Sbjct: 121 HPFHTVSCTGGVCSEEAEHLMKKFFVEKR 149


>gi|255320509|ref|ZP_05361690.1| tRNA-specific adenosine deaminase [Acinetobacter radioresistens
           SK82]
 gi|262378401|ref|ZP_06071558.1| conserved hypothetical protein [Acinetobacter radioresistens SH164]
 gi|255302481|gb|EET81717.1| tRNA-specific adenosine deaminase [Acinetobacter radioresistens
           SK82]
 gi|262299686|gb|EEY87598.1| conserved hypothetical protein [Acinetobacter radioresistens SH164]
          Length = 163

 Score =  210 bits (537), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 57/148 (38%), Positives = 85/148 (57%), Gaps = 1/148 (0%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
             + +M  A E+A  AA + E+PVGAV V NN++I    N+     D TAHAEI A+R  
Sbjct: 7   DDHYWMQLAYEQAALAASKGEVPVGAVIVSNNQVIGVGHNQPIFKHDPTAHAEIQALREA 66

Query: 63  CRILSQEILP-EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
           C++     LP +  LYVTLEPCTMC  A+  AR++R+ +GA+ PK G + +  +      
Sbjct: 67  CQLTQNYRLPDDTTLYVTLEPCTMCVGALIHARVQRVVFGATEPKAGSLVSARRLLESGY 126

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H  +   G  +++  Q + DFF+ RR
Sbjct: 127 YNHLFQFESGCLQEQCSQQLSDFFRMRR 154


>gi|59711257|ref|YP_204033.1| tRNA-specific adenosine deaminase [Vibrio fischeri ES114]
 gi|59479358|gb|AAW85145.1| tRNA-specific adenosine deaminase [Vibrio fischeri ES114]
          Length = 171

 Score =  210 bits (537), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 58/144 (40%), Positives = 82/144 (56%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           +  + +M  A+E A  A    E+PVGAV VL+++II    NR+    D TAHAE++AI+ 
Sbjct: 8   RDASFYMQRAMELAAIAEQEGEVPVGAVIVLDDEIIGEGWNRSISTHDATAHAEMMAIKQ 67

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
               +    L +  LYVTLEPC MCA AI  +RI+R+ +GAS+ K G   +    +T AT
Sbjct: 68  AGSKIENYRLVDATLYVTLEPCPMCAGAIVHSRIKRVIFGASDMKTGASGSVINLFTSAT 127

Query: 122 CHHSPEIYPGISEQRSRQIIQDFF 145
             H  E   G+ E+  R  +Q FF
Sbjct: 128 AFHFVECESGVMEEACRSQLQAFF 151


>gi|330504655|ref|YP_004381524.1| CMP/dCMP deaminase, zinc-binding protein [Pseudomonas mendocina
           NK-01]
 gi|328918941|gb|AEB59772.1| CMP/dCMP deaminase, zinc-binding protein [Pseudomonas mendocina
           NK-01]
          Length = 158

 Score =  210 bits (536), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 55/148 (37%), Positives = 83/148 (56%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
            +   FM  AL +A+  A + E+PVGAV V + +++ +  N      D +AHAE++AIR 
Sbjct: 10  SRDEHFMRLALAQARLGAGQGEVPVGAVLVQDGEVVGQGFNCPILRHDPSAHAEMVAIRA 69

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
             + +    LP   LYVTLEPC+MCA  I  ARI R+ + AS P+ G   +  QF+    
Sbjct: 70  AAQSVQNYRLPGSTLYVTLEPCSMCAGLIVHARIARVVFAASEPRAGVAISQGQFFDQGF 129

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H   +  G+  + S  +++DFFK RR
Sbjct: 130 LNHRVLVEGGLLAEESGALLKDFFKARR 157


>gi|29376713|ref|NP_815867.1| cytidine/deoxycytidylate deaminase family protein [Enterococcus
           faecalis V583]
 gi|227520261|ref|ZP_03950310.1| nucleoside deaminase [Enterococcus faecalis TX0104]
 gi|227555305|ref|ZP_03985352.1| nucleoside deaminase [Enterococcus faecalis HH22]
 gi|229549515|ref|ZP_04438240.1| nucleoside deaminase [Enterococcus faecalis ATCC 29200]
 gi|256617220|ref|ZP_05474066.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis ATCC
           4200]
 gi|256763008|ref|ZP_05503588.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis T3]
 gi|256853656|ref|ZP_05559021.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis T8]
 gi|256956593|ref|ZP_05560764.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis DS5]
 gi|256963481|ref|ZP_05567652.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis HIP11704]
 gi|257079519|ref|ZP_05573880.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis JH1]
 gi|257084716|ref|ZP_05579077.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis Fly1]
 gi|257087338|ref|ZP_05581699.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis D6]
 gi|257090472|ref|ZP_05584833.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis CH188]
 gi|294779058|ref|ZP_06744471.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Enterococcus faecalis PC1.1]
 gi|307270381|ref|ZP_07551686.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Enterococcus faecalis TX4248]
 gi|307272388|ref|ZP_07553644.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Enterococcus faecalis TX0855]
 gi|307277264|ref|ZP_07558368.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Enterococcus faecalis TX2134]
 gi|307287809|ref|ZP_07567847.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Enterococcus faecalis TX0109]
 gi|307290876|ref|ZP_07570767.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Enterococcus faecalis TX0411]
 gi|312901462|ref|ZP_07760737.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Enterococcus faecalis TX0470]
 gi|312903780|ref|ZP_07762953.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Enterococcus faecalis TX0635]
 gi|312953348|ref|ZP_07772190.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Enterococcus faecalis TX0102]
 gi|29344177|gb|AAO81937.1| cytidine/deoxycytidylate deaminase family protein [Enterococcus
           faecalis V583]
 gi|227072340|gb|EEI10303.1| nucleoside deaminase [Enterococcus faecalis TX0104]
 gi|227175516|gb|EEI56488.1| nucleoside deaminase [Enterococcus faecalis HH22]
 gi|229305333|gb|EEN71329.1| nucleoside deaminase [Enterococcus faecalis ATCC 29200]
 gi|256596747|gb|EEU15923.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis ATCC
           4200]
 gi|256684259|gb|EEU23954.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis T3]
 gi|256710599|gb|EEU25642.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis T8]
 gi|256947089|gb|EEU63721.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis DS5]
 gi|256953977|gb|EEU70609.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis HIP11704]
 gi|256987549|gb|EEU74851.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis JH1]
 gi|256992746|gb|EEU80048.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis Fly1]
 gi|256995368|gb|EEU82670.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis D6]
 gi|256999284|gb|EEU85804.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis CH188]
 gi|294453888|gb|EFG22277.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Enterococcus faecalis PC1.1]
 gi|306498076|gb|EFM67602.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Enterococcus faecalis TX0411]
 gi|306501197|gb|EFM70502.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Enterococcus faecalis TX0109]
 gi|306506194|gb|EFM75360.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Enterococcus faecalis TX2134]
 gi|306510942|gb|EFM79956.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Enterococcus faecalis TX0855]
 gi|306513289|gb|EFM81916.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Enterococcus faecalis TX4248]
 gi|310628736|gb|EFQ12019.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Enterococcus faecalis TX0102]
 gi|310632854|gb|EFQ16137.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Enterococcus faecalis TX0635]
 gi|311291451|gb|EFQ70007.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Enterococcus faecalis TX0470]
 gi|315025888|gb|EFT37820.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Enterococcus faecalis TX2137]
 gi|315028203|gb|EFT40135.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Enterococcus faecalis TX4000]
 gi|315035707|gb|EFT47639.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Enterococcus faecalis TX0027]
 gi|315149190|gb|EFT93206.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Enterococcus faecalis TX0012]
 gi|315154468|gb|EFT98484.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Enterococcus faecalis TX0031]
 gi|315157427|gb|EFU01444.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Enterococcus faecalis TX0312]
 gi|315161835|gb|EFU05852.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Enterococcus faecalis TX0645]
 gi|315164307|gb|EFU08324.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Enterococcus faecalis TX1302]
 gi|315166488|gb|EFU10505.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Enterococcus faecalis TX1341]
 gi|315171494|gb|EFU15511.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Enterococcus faecalis TX1342]
 gi|315575193|gb|EFU87384.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Enterococcus faecalis TX0309B]
 gi|315578180|gb|EFU90371.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Enterococcus faecalis TX0630]
 gi|315582620|gb|EFU94811.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Enterococcus faecalis TX0309A]
 gi|323481270|gb|ADX80709.1| cytidine and deoxycytidylate deaminase family protein [Enterococcus
           faecalis 62]
 gi|327535599|gb|AEA94433.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis OG1RF]
          Length = 173

 Score =  210 bits (536), Expect = 5e-53,   Method: Composition-based stats.
 Identities = 56/148 (37%), Positives = 81/148 (54%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           ++   FM  A+ EA+ A    E+P+GAV V   +II R  N     ++ TAHAE+ AI+ 
Sbjct: 11  EEKEFFMREAIAEAKKAEGLAEVPIGAVIVRQGEIIGRGHNLREARQEATAHAEMYAIQE 70

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
            CR +    L E  L+VTLEPC MC+ A+ LARI  +YYGA++PK G             
Sbjct: 71  ACRGIENWRLEETQLFVTLEPCPMCSGAMLLARIPEVYYGATDPKAGTAGTLMNLLEDER 130

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H   +  G+ E+  R ++  FFK+ R
Sbjct: 131 FNHVAYVEAGVLEEECRLLLVQFFKKLR 158


>gi|319946112|ref|ZP_08020360.1| tRNA-specific adenosine deaminase [Streptococcus australis ATCC
           700641]
 gi|319747758|gb|EFW00004.1| tRNA-specific adenosine deaminase [Streptococcus australis ATCC
           700641]
          Length = 170

 Score =  210 bits (536), Expect = 5e-53,   Method: Composition-based stats.
 Identities = 57/149 (38%), Positives = 82/149 (55%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +++   FM  AL+EA+ A    EIP+G V V + +II R  N   EL+    HAE++AI 
Sbjct: 6   LEEKEAFMREALKEAEIALAHEEIPIGCVIVKDGEIIGRGHNAREELQRAVMHAEVMAIE 65

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              +      L +  L+VT+EPC MC+ AI LARI ++ YGA+N K GG  +     T  
Sbjct: 66  EANQKEKSWRLLDTTLFVTIEPCVMCSGAIGLARIPQVIYGATNQKFGGAGSLYDILTDE 125

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  E+  GI E     I+Q FF++ R
Sbjct: 126 RLNHRVEVETGILEAECAAIMQTFFRQGR 154


>gi|315146338|gb|EFT90354.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Enterococcus faecalis TX4244]
          Length = 173

 Score =  210 bits (536), Expect = 5e-53,   Method: Composition-based stats.
 Identities = 56/148 (37%), Positives = 80/148 (54%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           ++   FM  A+ EA+ A    E+P+GAV V   +II R  N      + TAHAE+ AI+ 
Sbjct: 11  EEKEFFMREAIAEAKKAEGLAEVPIGAVIVRQGEIIGRGHNLREARHEATAHAEMYAIQE 70

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
            CR +    L E  L+VTLEPC MC+ A+ LARI  +YYGA++PK G             
Sbjct: 71  ACRGIENWRLEETQLFVTLEPCPMCSGAMLLARIPEVYYGATDPKAGTAGTLMNLLEDER 130

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H   +  G+ E+  R ++  FFK+ R
Sbjct: 131 FNHVAYVEAGVLEEECRLLLVQFFKKLR 158


>gi|296875658|ref|ZP_06899727.1| possible cytosine deaminase [Streptococcus parasanguinis ATCC
           15912]
 gi|322390383|ref|ZP_08063906.1| tRNA-specific adenosine deaminase [Streptococcus parasanguinis ATCC
           903]
 gi|296433342|gb|EFH19120.1| possible cytosine deaminase [Streptococcus parasanguinis ATCC
           15912]
 gi|321142924|gb|EFX38379.1| tRNA-specific adenosine deaminase [Streptococcus parasanguinis ATCC
           903]
          Length = 180

 Score =  210 bits (536), Expect = 5e-53,   Method: Composition-based stats.
 Identities = 57/149 (38%), Positives = 84/149 (56%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +++  +FM  AL+EA+ A   +EIP+G V V + +II R  N   EL+    HAEI+AI 
Sbjct: 16  IEEKAMFMREALKEAEIALANDEIPIGCVLVKDGQIIGRGHNAREELQRAVMHAEIMAIE 75

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              +  +   L +  L+VT+EPC MC+ AI LARI ++ YGA+N K GG  +        
Sbjct: 76  EANQRENSWRLLDTTLFVTIEPCVMCSGAIGLARIPQVIYGATNQKFGGAGSLYDILADE 135

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  E+  GI E     I+Q FF++ R
Sbjct: 136 RLNHRVEVETGILEAECAAIMQTFFRQGR 164


>gi|257094052|ref|YP_003167693.1| CMP/dCMP deaminase zinc-binding [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
 gi|257046576|gb|ACV35764.1| CMP/dCMP deaminase zinc-binding [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
          Length = 153

 Score =  210 bits (536), Expect = 5e-53,   Method: Composition-based stats.
 Identities = 57/147 (38%), Positives = 77/147 (52%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
               FM  AL  AQ A    E+PVGA+ V +  I+ R  N      D TAHAEI A+R  
Sbjct: 2   DDEYFMREALSLAQAAECLGEVPVGALVVRDGVIVGRGFNSPIGEHDPTAHAEIAALRDA 61

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
            R L    LP  +L+VTLEPC MCA A+  AR+ RL YGA +PK G   +    + +   
Sbjct: 62  ARTLRNYRLPGCELFVTLEPCAMCAGAMLQARLARLVYGARDPKTGVHGSVVDLFAVGRL 121

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H  ++  G+      +++ DFF  RR
Sbjct: 122 NHHTQVVGGVLAAECGRLLSDFFAARR 148


>gi|303234521|ref|ZP_07321158.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Finegoldia magna BVS033A4]
 gi|302494355|gb|EFL54124.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Finegoldia magna BVS033A4]
          Length = 155

 Score =  210 bits (536), Expect = 5e-53,   Method: Composition-based stats.
 Identities = 48/148 (32%), Positives = 76/148 (51%), Gaps = 1/148 (0%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
                FM  A+E+A+ A   +E+PVG V V N +II++A N      + T HAE+ AI  
Sbjct: 3   NNDEKFMIKAIEQARIAFDLDEVPVGCVIVKNGEIIAQAYNSVETDNNATMHAELKAINQ 62

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
             +++    L    +YVTLEPC MC  A+  +RI ++ +GA + K G   +         
Sbjct: 63  ATQVIGNFRLDNCTMYVTLEPCVMCTGALVYSRIPKVVFGAFDKKRGACGSLLSLNDYEG 122

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H  E+   I E+   +++Q FF+  R
Sbjct: 123 LNHKIEVKS-IMEKECVELMQSFFRRIR 149


>gi|268611568|ref|ZP_06145295.1| cytosine/adenosine deaminase [Ruminococcus flavefaciens FD-1]
          Length = 153

 Score =  210 bits (536), Expect = 5e-53,   Method: Composition-based stats.
 Identities = 62/147 (42%), Positives = 83/147 (56%), Gaps = 3/147 (2%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLN--NKIISRAGNRNRELKDVTAHAEILAIRMG 62
           + +M  ALE A+ A    E+PVGAV V     +I+    NR    K+  AHAEI AI   
Sbjct: 2   DNYMKRALELAREAFDEGEVPVGAVVVKKTTGEIVGEGRNRRETAKNALAHAEIEAIDQA 61

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
           CR L    LPE  LYVTLEPC MC  AI  +RI  +Y+GA + K G  E+  + ++L   
Sbjct: 62  CRKLGGWRLPECALYVTLEPCPMCCGAIINSRIDNVYFGAYDYKSGSAESVQKMFSLPY- 120

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           ++ PE+  GI E+    I+ +FFKE R
Sbjct: 121 NYRPEVMGGIMEEECSAILSEFFKELR 147


>gi|149196365|ref|ZP_01873420.1| Putative cytosine/adenosine deaminase [Lentisphaera araneosa
           HTCC2155]
 gi|149140626|gb|EDM29024.1| Putative cytosine/adenosine deaminase [Lentisphaera araneosa
           HTCC2155]
          Length = 174

 Score =  210 bits (536), Expect = 5e-53,   Method: Composition-based stats.
 Identities = 56/147 (38%), Positives = 77/147 (52%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
               +M  AL +A+ A    E+P+GAV V   ++I++A N+   LKD TAHAEILA+   
Sbjct: 19  SDEHYMRMALRQAEQAFQAGEVPIGAVVVHEGEVIAKAWNQVEMLKDATAHAEILALTQA 78

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
              L +  L    LYVT EPC MCA A+  +RI R+ +G ++ KGGG       +     
Sbjct: 79  SAHLDRWRLHGCTLYVTKEPCPMCAGALVNSRIDRVVFGLADEKGGGCGGSFHIHDHDGL 138

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
            H  +      E   R +IQ FFK RR
Sbjct: 139 LHKVKSEGHCCEDECRLLIQSFFKMRR 165


>gi|299067502|emb|CBJ38701.1| tRNA-specific adenosine deaminase [Ralstonia solanacearum CMR15]
          Length = 183

 Score =  210 bits (536), Expect = 5e-53,   Method: Composition-based stats.
 Identities = 53/148 (35%), Positives = 78/148 (52%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           ++   +M  AL +A+ A    E+PVGAV V  N+I+    N      D +AHAE+ A+R 
Sbjct: 17  ERDGYWMQQALVQARLAWGEGEVPVGAVVVRGNEIVGVGYNAPIGTHDPSAHAEMRALRQ 76

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
               L    LPE +++VTLEPC MCA A+  AR+ R+ YGA +PK G   +    +    
Sbjct: 77  AAVRLGNYRLPECEVFVTLEPCVMCAGAMLHARVARVVYGAPDPKTGAAGSVLDLFAETR 136

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H   I   +  Q    +++ FF ERR
Sbjct: 137 LNHQTAIIGSVLAQDCGDMLRAFFAERR 164


>gi|241889023|ref|ZP_04776327.1| tRNA-specific adenosine deaminase [Gemella haemolysans ATCC 10379]
 gi|241864272|gb|EER68650.1| tRNA-specific adenosine deaminase [Gemella haemolysans ATCC 10379]
          Length = 165

 Score =  210 bits (536), Expect = 5e-53,   Method: Composition-based stats.
 Identities = 55/148 (37%), Positives = 82/148 (55%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           K  + +M  ALEEA+ A  + E+P+GAV V+ +K++++A N   E +    HAEIL I+ 
Sbjct: 13  KDHSYYMEMALEEARRAYAKGEVPIGAVLVIGDKVVAKAHNTREENQQALNHAEILVIKE 72

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
            C       L    LY T+EPC MC+ AI  ARI  + YGAS+PK G   +         
Sbjct: 73  SCEKQGFWRLDNSYLYTTVEPCVMCSGAIVQARIENVIYGASDPKYGCCGSCIDLVGENK 132

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H  +I  G+ E+    ++++FFKE R
Sbjct: 133 FNHQAKIISGVLEEECSILMKNFFKELR 160


>gi|120611742|ref|YP_971420.1| CMP/dCMP deaminase [Acidovorax citrulli AAC00-1]
 gi|120590206|gb|ABM33646.1| CMP/dCMP deaminase, zinc-binding protein [Acidovorax citrulli
           AAC00-1]
          Length = 484

 Score =  210 bits (536), Expect = 6e-53,   Method: Composition-based stats.
 Identities = 54/145 (37%), Positives = 76/145 (52%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           +    +M  AL+EA  AA R EIPVGAV V + ++++R  N      D TAHAEI+A+R 
Sbjct: 17  QADEAWMRIALQEAAEAAARGEIPVGAVVVRDGELVARGSNAPIAGHDPTAHAEIVALRA 76

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
               L    L    LYVTLEPC MC+ A+  AR+ R+ YGA + K G   +    +    
Sbjct: 77  AAGRLGNYRLDGCTLYVTLEPCAMCSGAMLHARLDRVVYGAPDAKTGAAGSVVDLFAQPA 136

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFK 146
            +H   I  G+  Q    ++  FF+
Sbjct: 137 LNHHTRIEGGVLAQECGALLSGFFQ 161


>gi|146342901|ref|YP_001207949.1| putative cytidine and deoxycytidylate deaminase [Bradyrhizobium sp.
           ORS278]
 gi|146195707|emb|CAL79734.1| putative cytidine and deoxycytidylate deaminase [Bradyrhizobium sp.
           ORS278]
          Length = 148

 Score =  210 bits (536), Expect = 6e-53,   Method: Composition-based stats.
 Identities = 76/143 (53%), Positives = 104/143 (72%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  AL+ A++AA+  E+P+G V V +  +I+ A NR    +D TAHAEILA+R   + +
Sbjct: 6   FMDLALKAAESAAISGEVPIGCVVVRDGTVIAAAANRTLTDRDPTAHAEILALRQAAQAI 65

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
             E L + DLYVTLEPCTMCA AIS ARIRRLYYGA++ KGG +E+G +F+   TCHH+P
Sbjct: 66  GSERLIDCDLYVTLEPCTMCAGAISFARIRRLYYGAADSKGGAVESGVRFFAAPTCHHAP 125

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+Y  + EQ+S Q++++FFK RR
Sbjct: 126 EVYSAVGEQQSAQMLREFFKARR 148


>gi|257082102|ref|ZP_05576463.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis E1Sol]
 gi|257419759|ref|ZP_05596753.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis T11]
 gi|257422022|ref|ZP_05599012.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis X98]
 gi|256990132|gb|EEU77434.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis E1Sol]
 gi|257161587|gb|EEU91547.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis T11]
 gi|257163846|gb|EEU93806.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis X98]
 gi|315157050|gb|EFU01067.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Enterococcus faecalis TX0043]
          Length = 173

 Score =  210 bits (536), Expect = 6e-53,   Method: Composition-based stats.
 Identities = 56/148 (37%), Positives = 81/148 (54%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           ++   FM  A+ EA+ A    E+P+GAV V   +II R  N     ++ TAHAE+ AI+ 
Sbjct: 11  EEKEFFMREAIAEAKKAEGLAEVPIGAVIVRKGEIIGRGHNLREARQEATAHAEMYAIQE 70

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
            CR +    L E  L+VTLEPC MC+ A+ LARI  +YYGA++PK G             
Sbjct: 71  ACRGIENWRLEETQLFVTLEPCPMCSGAMLLARIPEVYYGATDPKAGTAGTLMNLLEDER 130

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H   +  G+ E+  R ++  FFK+ R
Sbjct: 131 FNHVAYVEAGVLEEECRLLLVQFFKKLR 158


>gi|148826450|ref|YP_001291203.1| preprotein translocase subunit SecA [Haemophilus influenzae PittEE]
 gi|148716610|gb|ABQ98820.1| preprotein translocase subunit SecA [Haemophilus influenzae PittEE]
          Length = 161

 Score =  210 bits (535), Expect = 6e-53,   Method: Composition-based stats.
 Identities = 62/147 (42%), Positives = 82/147 (55%), Gaps = 1/147 (0%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNK-IISRAGNRNRELKDVTAHAEILAIRMG 62
               M  ALE A  A    EIPVGAV V + + II    N +    D TAHAEI+A+R G
Sbjct: 11  DEKMMRYALELADKAEALGEIPVGAVLVDDARNIIGEGWNLSIVQSDPTAHAEIIALRNG 70

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
            + +    L    LYVTLEPCTMCA AI  +RI+RL +GAS+ K G I +   F+     
Sbjct: 71  AKNIQNYRLLNSTLYVTLEPCTMCAGAILHSRIKRLVFGASDYKTGAIGSRFHFFDDYKM 130

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H+ EI  G+  +   Q +  FF++RR
Sbjct: 131 NHTLEITSGVLAEECSQKLSTFFQKRR 157


>gi|256844520|ref|ZP_05550006.1| cytidine/deoxycytidylate deaminase [Lactobacillus crispatus
           125-2-CHN]
 gi|256849091|ref|ZP_05554524.1| cytidine/deoxycytidylate deaminase [Lactobacillus crispatus
           MV-1A-US]
 gi|262047573|ref|ZP_06020528.1| cytidine/deoxycytidylate deaminase [Lactobacillus crispatus
           MV-3A-US]
 gi|312977923|ref|ZP_07789669.1| cytidine/deoxycytidylate deaminase family protein [Lactobacillus
           crispatus CTV-05]
 gi|256613598|gb|EEU18801.1| cytidine/deoxycytidylate deaminase [Lactobacillus crispatus
           125-2-CHN]
 gi|256713867|gb|EEU28855.1| cytidine/deoxycytidylate deaminase [Lactobacillus crispatus
           MV-1A-US]
 gi|260572149|gb|EEX28714.1| cytidine/deoxycytidylate deaminase [Lactobacillus crispatus
           MV-3A-US]
 gi|310895230|gb|EFQ44298.1| cytidine/deoxycytidylate deaminase family protein [Lactobacillus
           crispatus CTV-05]
          Length = 166

 Score =  210 bits (535), Expect = 6e-53,   Method: Composition-based stats.
 Identities = 50/149 (33%), Positives = 85/149 (57%), Gaps = 1/149 (0%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIR 60
           +    +M  A+++A+ A  + E+P+GAV V  + +++    NR    +D T HAE++AI+
Sbjct: 5   EDKRKYMQLAIDQAKEAEKQGEVPIGAVVVDPDGRVVGTGYNRRELDEDATQHAEMIAIK 64

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
             C  L    L +  L+VTLEPC MCA AI  +RI+ +Y+GA +PK G   +    +++ 
Sbjct: 65  EACSKLGMWRLIDCSLFVTLEPCPMCAGAIINSRIKDVYFGALDPKAGACGSVVDLFSVE 124

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H P    G+   +  Q+++DFF+  R
Sbjct: 125 KFNHHPHAIRGLYRDQCAQMLKDFFRAIR 153


>gi|71909993|ref|YP_281543.1| tRNA-specific adenosine deaminase [Streptococcus pyogenes MGAS5005]
 gi|60416281|sp|P68999|TADA_STRP1 RecName: Full=tRNA-specific adenosine deaminase
 gi|71852775|gb|AAZ50798.1| tRNA-specific adenosine deaminase [Streptococcus pyogenes MGAS5005]
          Length = 171

 Score =  210 bits (535), Expect = 6e-53,   Method: Composition-based stats.
 Identities = 54/149 (36%), Positives = 81/149 (54%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +++   FM  AL+EA+ +  + EIP+G V V + +II R  N   E      HAE++AI 
Sbjct: 5   LEEQTYFMQEALKEAEKSLQKAEIPIGCVIVKDGEIIGRGHNAREESNQAIMHAEMMAIN 64

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
                     L +  L+VT+EPC MC+ AI LARI  + YGASN K GG+++  Q  T  
Sbjct: 65  EANAHEGNWRLLDTTLFVTIEPCVMCSGAIGLARIPHVIYGASNQKFGGVDSLYQILTDE 124

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  ++  G+       I+Q FF++ R
Sbjct: 125 RLNHRVQVERGLLAADCANIMQTFFRQGR 153


>gi|315652559|ref|ZP_07905540.1| cytidine/deoxycytidylate deaminase [Eubacterium saburreum DSM 3986]
 gi|315485188|gb|EFU75589.1| cytidine/deoxycytidylate deaminase [Eubacterium saburreum DSM 3986]
          Length = 157

 Score =  210 bits (535), Expect = 6e-53,   Method: Composition-based stats.
 Identities = 51/153 (33%), Positives = 80/153 (52%), Gaps = 5/153 (3%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M + + F+  A+++A+ A    ++P+G V V  +KII+R  NR  + K   +HAEI+AI+
Sbjct: 1   MYRDDYFLKEAVKQAKKALSIGDVPIGCVIVFEDKIIARGYNRRNKDKSTLSHAEIIAIK 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
             C+ +    L +  +Y+TLEPC MCA AI  +RI+R   GA NPK G   +        
Sbjct: 61  KACKKMGDWRLEDCTMYITLEPCPMCAGAIVQSRIKRAVLGAMNPKAGCAGSVLNILQTD 120

Query: 121 TCHHSPEIYPGI----SEQRSRQIIQDFFKERR 149
             +H  E+   I     +     ++  FFK  R
Sbjct: 121 GFNHKTEVEL-ISCESLKNECSLLLSSFFKSLR 152


>gi|207743199|ref|YP_002259591.1| cytosine/adenosine deaminase protein [Ralstonia solanacearum
           IPO1609]
 gi|206594596|emb|CAQ61523.1| cytosine/adenosine deaminase protein [Ralstonia solanacearum
           IPO1609]
          Length = 178

 Score =  210 bits (535), Expect = 6e-53,   Method: Composition-based stats.
 Identities = 53/148 (35%), Positives = 78/148 (52%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           ++   +M  AL +A+ A    E+PVGAV V  N+I+    N      D +AHAE+ A+R 
Sbjct: 12  ERDGYWMQQALVQARLAWGEGEVPVGAVVVRGNEIVGVGYNAPIGTHDPSAHAEMRALRQ 71

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
               L    LPE +++VTLEPC MCA A+  AR+ R+ YGA +PK G   +    +    
Sbjct: 72  AAVTLGNYRLPECEVFVTLEPCVMCAGAMLHARVARVVYGAPDPKTGAAGSVLDLFAETR 131

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H   I   +  Q    +++ FF ERR
Sbjct: 132 LNHQTAILGSVLAQECGDMLRAFFAERR 159


>gi|89094120|ref|ZP_01167063.1| hypothetical protein MED92_16295 [Oceanospirillum sp. MED92]
 gi|89081595|gb|EAR60824.1| hypothetical protein MED92_16295 [Oceanospirillum sp. MED92]
          Length = 168

 Score =  210 bits (535), Expect = 7e-53,   Method: Composition-based stats.
 Identities = 56/148 (37%), Positives = 85/148 (57%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           K    +M  ALE A  A   NE+PVGA+ VL+ +++    N      D TAHAE++A+R 
Sbjct: 5   KTDLHWMERALELADRAEQLNEVPVGALVVLDGEVVGEGWNHPISGNDPTAHAEMMALRA 64

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
             + +    L   +L+VT+EPCTMC+ AI  ARI+R+ YGA+  K G +++  Q ++   
Sbjct: 65  AAQKVGNYRLVGAELFVTIEPCTMCSGAIVHARIKRVIYGATEAKSGAVDSNCQLFSQPW 124

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H  EI  G+  +R  + I  FF+ RR
Sbjct: 125 INHDVEITRGVLAERCSKKISAFFQRRR 152


>gi|296314748|ref|ZP_06864689.1| tRNA-specific adenosine deaminase [Neisseria polysaccharea ATCC
           43768]
 gi|296838389|gb|EFH22327.1| tRNA-specific adenosine deaminase [Neisseria polysaccharea ATCC
           43768]
          Length = 239

 Score =  210 bits (535), Expect = 7e-53,   Method: Composition-based stats.
 Identities = 54/148 (36%), Positives = 81/148 (54%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           ++   FM  AL +A+ +A   EIPVGAV V + KII+ A N      +V+ HAEI A+  
Sbjct: 90  EEMEHFMREALRQAEQSAADGEIPVGAVIVSDGKIIASAHNTCIADCNVSCHAEINALAQ 149

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
               +    L   D+Y+TLEPC MCA+A+  ARI+R+ YGA+ PK G   +    +    
Sbjct: 150 AGSEMQNYRLDGCDIYITLEPCAMCASALIQARIKRVIYGAAEPKTGAAGSIVNLFADKR 209

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +    I  GI ++  R ++  FF+ +R
Sbjct: 210 LNTHTAIRGGILQEECRAVLSRFFQNKR 237


>gi|315033440|gb|EFT45372.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Enterococcus faecalis TX0017]
          Length = 173

 Score =  210 bits (535), Expect = 7e-53,   Method: Composition-based stats.
 Identities = 56/148 (37%), Positives = 82/148 (55%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           ++  +FM  A+ EA+ A    E+P+GAV V   +II R  N     ++ TAHAE+ AI+ 
Sbjct: 11  EEKELFMREAIAEAKKAEGLAEVPIGAVIVRQGEIIGRGHNLREARQEATAHAEMYAIQE 70

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
            CR +    L E  L+VTLEPC MC+ A+ LARI  +YYGA++PK G             
Sbjct: 71  ACRGIENWRLEETQLFVTLEPCPMCSGAMLLARIPEVYYGATDPKAGTAGTLMNLLEDER 130

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H   +  G+ E+  R ++  FFK+ R
Sbjct: 131 FNHVAYVEAGVLEEECRLLLVQFFKKLR 158


>gi|293399195|ref|ZP_06643360.1| cytosine deaminase [Neisseria gonorrhoeae F62]
 gi|291610609|gb|EFF39719.1| cytosine deaminase [Neisseria gonorrhoeae F62]
          Length = 239

 Score =  210 bits (535), Expect = 7e-53,   Method: Composition-based stats.
 Identities = 55/148 (37%), Positives = 81/148 (54%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           ++   FM  AL +A+ +A   EIPVGAV V + KII+ A N      +V+ HAEI A+  
Sbjct: 90  EEMGYFMREALRQAEQSAADGEIPVGAVIVSDGKIIASAHNTCIADCNVSRHAEINALAQ 149

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
               +    L   D+Y+TLEPC MCA+A+  ARIRR+ YGA+ PK G   +    +    
Sbjct: 150 AGSEMQNYRLDGCDIYITLEPCAMCASALIQARIRRVIYGATEPKTGAAGSIVNLFADKR 209

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +    I  GI ++  R ++  FF+ +R
Sbjct: 210 LNTHTAIRGGILQEECRAVLSRFFQNKR 237


>gi|229845957|ref|ZP_04466069.1| hypothetical protein CGSHi7P49H1_03883 [Haemophilus influenzae
           7P49H1]
 gi|229810961|gb|EEP46678.1| hypothetical protein CGSHi7P49H1_03883 [Haemophilus influenzae
           7P49H1]
          Length = 159

 Score =  210 bits (535), Expect = 7e-53,   Method: Composition-based stats.
 Identities = 62/143 (43%), Positives = 82/143 (57%), Gaps = 1/143 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNK-IISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  ALE A  A    EIPVGAV V + + II    N +    D TAHAEI+A+R G + +
Sbjct: 1   MRYALELADKAEALGEIPVGAVLVDDARNIIGEGWNLSIVQSDPTAHAEIIALRNGAKNI 60

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L    LYVTLEPCTMCA AI  +RI+RL +GAS+ K G I +   F+     +H+ 
Sbjct: 61  QNYRLLNSTLYVTLEPCTMCAGAILHSRIKRLVFGASDYKTGAIGSRFHFFDDYKMNHTL 120

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           EI  G+  +   Q +  FF++RR
Sbjct: 121 EITSGVLAEECSQKLSTFFQKRR 143


>gi|229552943|ref|ZP_04441668.1| nucleoside deaminase [Lactobacillus rhamnosus LMS2-1]
 gi|229313687|gb|EEN79660.1| nucleoside deaminase [Lactobacillus rhamnosus LMS2-1]
          Length = 170

 Score =  210 bits (535), Expect = 7e-53,   Method: Composition-based stats.
 Identities = 61/145 (42%), Positives = 80/145 (55%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           N +M  AL EA+ AA   E+P+GAV V + +II R  N     +D T HAEILAI+  CR
Sbjct: 9   NQYMIAALVEAKKAAAIGEVPIGAVVVHDQQIIGRGYNLRETTQDATQHAEILAIQAACR 68

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
            L    L +  L+VTLEPC MCA A+  ARI   Y+GA++PK G              +H
Sbjct: 69  QLGTWRLEDCSLFVTLEPCPMCAGAMINARIATCYFGATDPKAGVAGTFYNLLEDTRFNH 128

Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149
              + PGI    S  ++QDFF+  R
Sbjct: 129 QVAVVPGIQATASAALLQDFFRAIR 153


>gi|17546170|ref|NP_519572.1| hydrolase [Ralstonia solanacearum GMI1000]
 gi|17428466|emb|CAD15153.1| putative cytosine/adenosine deaminase protein [Ralstonia
           solanacearum GMI1000]
          Length = 183

 Score =  210 bits (535), Expect = 7e-53,   Method: Composition-based stats.
 Identities = 53/148 (35%), Positives = 78/148 (52%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           ++   +M  AL +A+ A    E+PVGAV V  N+I+    N      D +AHAE+ A+R 
Sbjct: 17  ERDGYWMQQALVQARLAWGEGEVPVGAVVVRGNEIVGVGYNAPIGTHDPSAHAEMRALRQ 76

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
               L    LPE +++VTLEPC MCA A+  AR+ R+ YGA +PK G   +    +    
Sbjct: 77  AAVRLGNYRLPECEVFVTLEPCVMCAGAMLHARVARVVYGAPDPKTGAAGSVLDLFAETR 136

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H   I   +  Q    +++ FF ERR
Sbjct: 137 LNHQTAIIGSVLAQDCGDMLRAFFAERR 164


>gi|256961376|ref|ZP_05565547.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis Merz96]
 gi|293383665|ref|ZP_06629574.1| tRNA-specific adenosine deaminase [Enterococcus faecalis R712]
 gi|293387223|ref|ZP_06631781.1| tRNA-specific adenosine deaminase [Enterococcus faecalis S613]
 gi|312906213|ref|ZP_07765225.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Enterococcus faecalis DAPTO 512]
 gi|312909559|ref|ZP_07768414.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Enterococcus faecalis DAPTO 516]
 gi|256951872|gb|EEU68504.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis Merz96]
 gi|291079001|gb|EFE16365.1| tRNA-specific adenosine deaminase [Enterococcus faecalis R712]
 gi|291083361|gb|EFE20324.1| tRNA-specific adenosine deaminase [Enterococcus faecalis S613]
 gi|310627859|gb|EFQ11142.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Enterococcus faecalis DAPTO 512]
 gi|311290232|gb|EFQ68788.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Enterococcus faecalis DAPTO 516]
          Length = 173

 Score =  210 bits (535), Expect = 7e-53,   Method: Composition-based stats.
 Identities = 56/148 (37%), Positives = 82/148 (55%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           ++  +FM  A+ EA+ A    E+P+GAV V   +II R  N     ++ TAHAE+ AI+ 
Sbjct: 11  EEKEIFMREAIAEAKKAEGLAEVPIGAVIVRQGEIIGRGHNLREARQEATAHAEMYAIQE 70

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
            CR +    L E  L+VTLEPC MC+ A+ LARI  +YYGA++PK G             
Sbjct: 71  ACRGIENWRLEETQLFVTLEPCPMCSGAMLLARIPEVYYGATDPKAGTAGTLMNLLEDER 130

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H   +  G+ E+  R ++  FFK+ R
Sbjct: 131 FNHVAYVEAGVLEEECRLLLVQFFKKLR 158


>gi|209558752|ref|YP_002285224.1| Cytosine deaminase [Streptococcus pyogenes NZ131]
 gi|209539953|gb|ACI60529.1| Cytosine deaminase [Streptococcus pyogenes NZ131]
          Length = 171

 Score =  210 bits (535), Expect = 7e-53,   Method: Composition-based stats.
 Identities = 54/149 (36%), Positives = 80/149 (53%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +++   FM  AL+EA+ +  + EIP+G V V + +II R  N   E      HAE++AI 
Sbjct: 5   LEEQTYFMQEALKEAEKSLQKAEIPIGCVIVKDGEIIGRGHNAREESNQAIMHAEMMAIN 64

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
                     L +  L+VT+EPC MC+ AI LARI  + YGASN K GG ++  Q  T  
Sbjct: 65  EANAHEGNWRLLDTTLFVTIEPCVMCSGAIGLARIPHVIYGASNQKFGGADSLYQILTDE 124

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  ++  G+       I+Q FF++ R
Sbjct: 125 RLNHRVQVERGLLAADCANIMQTFFRQGR 153


>gi|55823732|ref|YP_142173.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus
           thermophilus CNRZ1066]
 gi|55739717|gb|AAV63358.1| cytidine/deoxycytidylate deaminase family protein, putative
           [Streptococcus thermophilus CNRZ1066]
          Length = 172

 Score =  210 bits (535), Expect = 7e-53,   Method: Composition-based stats.
 Identities = 58/148 (39%), Positives = 85/148 (57%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           ++  +FMS AL+EAQ +  + EIP+G V V + +I+ R  N   EL     HAE++AI+ 
Sbjct: 7   EEKEIFMSEALKEAQKSLDKAEIPIGCVIVKDREIVGRGHNAREELNQAIMHAEVMAIQE 66

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
             R +    L +  L+VT+EPC MC+ AI LARI ++ YGA N K GG  +         
Sbjct: 67  ANRTVGNWRLLDCTLFVTIEPCVMCSGAIGLARIPKVIYGACNQKFGGAGSLYDILRDER 126

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H  E+  GI E    +I+QDFF++ R
Sbjct: 127 LNHRVEVETGIMEVDCAKIMQDFFRQSR 154


>gi|332830410|gb|EGK03038.1| hypothetical protein HMPREF9455_01288 [Dysgonomonas gadei ATCC
           BAA-286]
          Length = 147

 Score =  210 bits (535), Expect = 7e-53,   Method: Composition-based stats.
 Identities = 55/147 (37%), Positives = 81/147 (55%), Gaps = 5/147 (3%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
               +M  AL EAQ A  + E+P+GAV V  N+II+RA N    L DVTAHAE+ AI   
Sbjct: 6   TDEHYMRQALNEAQIAFEKKEVPIGAVIVCQNRIIARAHNLTETLNDVTAHAEMQAITAA 65

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
              L  + L    LYVTLEPC MCA  +  ++I ++ +GA + K G        ++    
Sbjct: 66  ANFLGGKYLTNCTLYVTLEPCPMCAGGLLWSQIPKVVFGAKDEKKG-----YSLFSPNIL 120

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           H+   I  GI E+    ++++FF+++R
Sbjct: 121 HNKTSIISGILEEECAFLLKEFFRQKR 147


>gi|283131328|dbj|BAI63333.1| tRNA-specific adenosine deaminase [Streptococcus dysgalactiae
           subsp. equisimilis]
          Length = 183

 Score =  210 bits (535), Expect = 7e-53,   Method: Composition-based stats.
 Identities = 54/149 (36%), Positives = 81/149 (54%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +++   FM  AL+EA+ +  + EIP+G V V + +II R  N   E      HAE++AI 
Sbjct: 13  LEEQTYFMQEALKEAEKSLQKAEIPIGCVIVKDGEIIGRGHNAREESNQAIMHAEMMAIN 72

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
                     L +  L+VT+EPC MC+ AI LARI  + YGASN K GG ++  Q  T  
Sbjct: 73  EANAHEGNWRLLDTTLFVTIEPCVMCSGAIGLARIPHVIYGASNQKFGGADSLYQILTDE 132

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  ++  G+  +    I+Q FF++ R
Sbjct: 133 RLNHRVQVERGLLAEDCANIMQTFFRQGR 161


>gi|58336712|ref|YP_193297.1| cytidine-deoxycytidylate deaminase [Lactobacillus acidophilus NCFM]
 gi|58254029|gb|AAV42266.1| cytidine-deoxycytidylate deaminase [Lactobacillus acidophilus NCFM]
          Length = 168

 Score =  210 bits (535), Expect = 7e-53,   Method: Composition-based stats.
 Identities = 53/144 (36%), Positives = 83/144 (57%), Gaps = 1/144 (0%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           +M  A+++A+ A  + E+P+GAV V    KII    NR    +D T HAE++AI+  C+ 
Sbjct: 10  YMQLAIDKAKEAEKQGEVPIGAVVVDPTGKIIGTGYNRRELDEDSTQHAEMIAIKEACKN 69

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           L    L +  L+VTLEPC MCA AI  +RI+ +Y+GA +PK G   +    + +   +H 
Sbjct: 70  LGMWRLIDCSLFVTLEPCPMCAGAIINSRIKDVYFGALDPKAGACGSVVDLFAVERFNHH 129

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
           P    G+   +  Q+++DFF+  R
Sbjct: 130 PHAIRGLYRDQCAQMLKDFFRAIR 153


>gi|81427949|ref|YP_394948.1| putative cytidine deaminase [Lactobacillus sakei subsp. sakei 23K]
 gi|78609590|emb|CAI54636.1| Putative cytidine deaminase [Lactobacillus sakei subsp. sakei 23K]
          Length = 172

 Score =  210 bits (535), Expect = 7e-53,   Method: Composition-based stats.
 Identities = 52/141 (36%), Positives = 77/141 (54%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           + +M  A++EA  A +  E+P+GAV V + +II R  N     +D T HAEI+AI+  C 
Sbjct: 9   DQWMQVAIDEANQARIIGEVPIGAVIVKDGQIIGRGHNIREHAQDATLHAEIIAIQEACM 68

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
           +     L +  ++VTLEPC MCA AI  +RI  +Y+GAS+PK G         T    +H
Sbjct: 69  VEKSWRLEDTAIFVTLEPCPMCAGAIINSRIPNVYFGASDPKAGVTGTLMNLLTDKRFNH 128

Query: 125 SPEIYPGISEQRSRQIIQDFF 145
              +  G+ E     ++Q FF
Sbjct: 129 QATVVAGVREAECAALLQTFF 149


>gi|229545278|ref|ZP_04434003.1| nucleoside deaminase [Enterococcus faecalis TX1322]
 gi|229309628|gb|EEN75615.1| nucleoside deaminase [Enterococcus faecalis TX1322]
          Length = 173

 Score =  209 bits (534), Expect = 8e-53,   Method: Composition-based stats.
 Identities = 56/148 (37%), Positives = 80/148 (54%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           ++   FM  A+ EA+ A    E+P+GAV V   +II R  N     ++ TAHAE+ AI+ 
Sbjct: 11  EEKEFFMREAIAEAKKAEGLAEVPIGAVIVRQGEIIGRGHNLREARQEATAHAEMYAIQE 70

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
            CR +    L E  L+VTLEPC MC+ A+ LARI  +YYGA++PK G             
Sbjct: 71  ACRGIENWRLEETQLFVTLEPCPMCSGAMLLARIPEVYYGATDPKAGTAGTLMNLLEDER 130

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H   +  G+ E+  R ++  FFK  R
Sbjct: 131 FNHVAYVEAGVLEEECRLLLVQFFKRLR 158


>gi|257416518|ref|ZP_05593512.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis AR01/DG]
 gi|257158346|gb|EEU88306.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis ARO1/DG]
          Length = 173

 Score =  209 bits (534), Expect = 8e-53,   Method: Composition-based stats.
 Identities = 55/148 (37%), Positives = 81/148 (54%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           ++   FM  A+ EA+ A    E+P+GAV V   +II R  N     ++ T+HAE+ AI+ 
Sbjct: 11  EEKEFFMREAIAEAKKAEGLAEVPIGAVIVRQGEIIGRGHNLREARQEATSHAEMYAIQE 70

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
            CR +    L E  L+VTLEPC MC+ A+ LARI  +YYGA++PK G             
Sbjct: 71  ACRGIENWRLEETQLFVTLEPCPMCSGAMLLARIPEVYYGATDPKAGTAGTLMNLLEDER 130

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H   +  G+ E+  R ++  FFK+ R
Sbjct: 131 FNHVAYVEAGVLEEECRLLLVQFFKKLR 158


>gi|239930296|ref|ZP_04687249.1| cytidine/deoxycytidine deaminase [Streptomyces ghanaensis ATCC
           14672]
 gi|291438644|ref|ZP_06578034.1| cytidine/deoxycytidine deaminase [Streptomyces ghanaensis ATCC
           14672]
 gi|291341539|gb|EFE68495.1| cytidine/deoxycytidine deaminase [Streptomyces ghanaensis ATCC
           14672]
          Length = 161

 Score =  209 bits (534), Expect = 8e-53,   Method: Composition-based stats.
 Identities = 54/143 (37%), Positives = 78/143 (54%), Gaps = 2/143 (1%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNK--IISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M  AL+EA+ A    ++PVGAV +  +   +++R  N      D TAHAE+LA+R     
Sbjct: 19  MRLALDEAERAVRGGDVPVGAVVLAPDGTTVLARGHNEREAAGDPTAHAEVLAVRRAAAE 78

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           L Q  L    L VTLEPCTMCA AI  AR+ R+ YGA + K G   +          +H 
Sbjct: 79  LGQWRLAGCTLVVTLEPCTMCAGAIQQARVDRVVYGARDEKAGAAGSLWDLLRDRRLNHR 138

Query: 126 PEIYPGISEQRSRQIIQDFFKER 148
           PE+  G+  +   +++ +FF+ER
Sbjct: 139 PEVVEGVLAEECARLLTEFFRER 161


>gi|295692237|ref|YP_003600847.1| tRNA-specific adenosine deaminase [Lactobacillus crispatus ST1]
 gi|295030343|emb|CBL49822.1| tRNA-specific adenosine deaminase [Lactobacillus crispatus ST1]
          Length = 166

 Score =  209 bits (534), Expect = 8e-53,   Method: Composition-based stats.
 Identities = 50/149 (33%), Positives = 85/149 (57%), Gaps = 1/149 (0%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIR 60
           +    +M  A+++A+ A  + E+P+GAV V  + +++    NR    +D T HAE++AI+
Sbjct: 5   EDKRKYMQLAIDQAKEAEKQGEVPIGAVVVDPDGRVVGTGYNRRELDEDATQHAEMIAIK 64

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
             C  L    L +  L+VTLEPC MCA AI  +RI+ +Y+GA +PK G   +    +++ 
Sbjct: 65  EACSKLGMWRLIDCSLFVTLEPCPMCAGAIINSRIKDVYFGALDPKAGACGSVVDLFSVE 124

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H P    G+   +  Q+++DFF+  R
Sbjct: 125 KFNHHPHAIRGLYRDQCAQMLKDFFRAIR 153


>gi|76799055|ref|ZP_00781248.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus
           agalactiae 18RS21]
 gi|76585592|gb|EAO62157.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus
           agalactiae 18RS21]
          Length = 168

 Score =  209 bits (534), Expect = 8e-53,   Method: Composition-based stats.
 Identities = 54/148 (36%), Positives = 81/148 (54%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           ++   FM+ AL+ A+++  + EIP+G V V +  II R  N   E      HAEI+AI  
Sbjct: 7   EEKEWFMTEALKXAKSSLEKEEIPIGCVIVKDGHIIGRGHNAREEFNKAILHAEIMAINN 66

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
               +    L +  L+VT+EPC MC+ AI LARI  + YGA N K G   +     + + 
Sbjct: 67  ANEKVGNWRLLDTTLFVTVEPCVMCSGAIGLARIPHVIYGAKNTKFGAAGSLYDILSDSR 126

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H  E+  GI E +  +I+QDFF++ R
Sbjct: 127 LNHRVEVETGILEDQCAKIMQDFFRKGR 154


>gi|145298514|ref|YP_001141355.1| cytosine/adenosine deaminase [Aeromonas salmonicida subsp.
           salmonicida A449]
 gi|142851286|gb|ABO89607.1| cytosine/adenosine deaminase [Aeromonas salmonicida subsp.
           salmonicida A449]
          Length = 199

 Score =  209 bits (534), Expect = 8e-53,   Method: Composition-based stats.
 Identities = 52/148 (35%), Positives = 75/148 (50%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           ++   +M  A+  A  A    EIPVGAV VL ++++   GNR+    D  AHAEI+AIR 
Sbjct: 34  EQDERWMRHAMALAARAEGIGEIPVGAVLVLGDEVVGEGGNRSISEHDACAHAEIMAIRA 93

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
               L    L +  LYVTLEPC MCA A+  +R++R+ +GA + K G   +         
Sbjct: 94  AGARLENYRLIDTVLYVTLEPCCMCAGALIHSRVKRVVFGARDLKTGAAGSVFDILQDPR 153

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H   +  G+        +  FFK RR
Sbjct: 154 HNHRVSLTGGVLADACSAQLSAFFKRRR 181


>gi|257899803|ref|ZP_05679456.1| cytidine/deoxycytidylate deaminase [Enterococcus faecium Com15]
 gi|293571142|ref|ZP_06682180.1| tRNA-specific adenosine deaminase [Enterococcus faecium E980]
 gi|257837715|gb|EEV62789.1| cytidine/deoxycytidylate deaminase [Enterococcus faecium Com15]
 gi|291608755|gb|EFF38039.1| tRNA-specific adenosine deaminase [Enterococcus faecium E980]
          Length = 165

 Score =  209 bits (534), Expect = 9e-53,   Method: Composition-based stats.
 Identities = 52/143 (36%), Positives = 76/143 (53%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
               +M  AL EA+ A + +E+P+GAV VL  ++I +  N     +D T HAE+LAI+  
Sbjct: 10  DKEKWMRLALAEAKKAEVLHEVPIGAVVVLEGEVIGKGYNLRETTQDATTHAEMLAIKEA 69

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
           C  +    L    L+VTLEPC MC+ A+ L+R+  +Y+GA +PKGG              
Sbjct: 70  CEKVGSWRLENASLFVTLEPCPMCSGAMILSRVAEVYFGAYDPKGGTAGTLMNLLEDERF 129

Query: 123 HHSPEIYPGISEQRSRQIIQDFF 145
           +H   +  GI E     I+ DFF
Sbjct: 130 NHQAYVEGGILEDECGMILTDFF 152


>gi|227552392|ref|ZP_03982441.1| nucleoside deaminase [Enterococcus faecium TX1330]
 gi|257888367|ref|ZP_05668020.1| cytidine/deoxycytidylate deaminase [Enterococcus faecium 1,141,733]
 gi|257896743|ref|ZP_05676396.1| cytidine/deoxycytidylate deaminase [Enterococcus faecium Com12]
 gi|293378075|ref|ZP_06624251.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Enterococcus faecium PC4.1]
 gi|227178480|gb|EEI59452.1| nucleoside deaminase [Enterococcus faecium TX1330]
 gi|257824421|gb|EEV51353.1| cytidine/deoxycytidylate deaminase [Enterococcus faecium 1,141,733]
 gi|257833308|gb|EEV59729.1| cytidine/deoxycytidylate deaminase [Enterococcus faecium Com12]
 gi|292643330|gb|EFF61464.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Enterococcus faecium PC4.1]
          Length = 171

 Score =  209 bits (534), Expect = 9e-53,   Method: Composition-based stats.
 Identities = 51/143 (35%), Positives = 77/143 (53%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
               +M  AL EA+ A + +E+P+GAV VL  ++I +  N     +D T HAE+LAI+  
Sbjct: 10  DKEKWMRLALAEAKKAEVLHEVPIGAVVVLEGEVIGKGYNLRETTQDATTHAEMLAIKEA 69

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
           C  +    L    L+VTLEPC MC+ A+ L+R+  +Y+GA +PKGG              
Sbjct: 70  CEKVGSWRLENASLFVTLEPCPMCSGAMILSRVAEVYFGAYDPKGGTAGTLMNLLEDERF 129

Query: 123 HHSPEIYPGISEQRSRQIIQDFF 145
           +H   +  GI E    +++ DFF
Sbjct: 130 NHQAYVEGGILEDECGRVLTDFF 152


>gi|156973452|ref|YP_001444359.1| hypothetical protein VIBHAR_01142 [Vibrio harveyi ATCC BAA-1116]
 gi|156525046|gb|ABU70132.1| hypothetical protein VIBHAR_01142 [Vibrio harveyi ATCC BAA-1116]
          Length = 164

 Score =  209 bits (534), Expect = 9e-53,   Method: Composition-based stats.
 Identities = 55/142 (38%), Positives = 76/142 (53%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  A+E A+ A    E+PVGAV V + +II+   NR+    D TAHAEI  +R     L 
Sbjct: 1   MRRAMELAEQAEAEGEVPVGAVLVKDGEIIAEGWNRSICAHDATAHAEIQTLRKAGEALG 60

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
              L +  LYVTLEPC MCA A+  +R++R+ YGA + K G        +     +H   
Sbjct: 61  NYRLLDTTLYVTLEPCPMCAGALLHSRVKRVVYGAPDLKAGAAGTVLNLFESQAAYHYAT 120

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
           +  G+ E+  R  +Q FFK RR
Sbjct: 121 VENGLLEEECRSQLQAFFKRRR 142


>gi|50913560|ref|YP_059532.1| tRNA-specific adenosine deaminase [Streptococcus pyogenes
           MGAS10394]
 gi|71902843|ref|YP_279646.1| tRNA-specific adenosine deaminase [Streptococcus pyogenes MGAS6180]
 gi|94987813|ref|YP_595914.1| tRNA-specific adenosine deaminase [Streptococcus pyogenes MGAS9429]
 gi|94989691|ref|YP_597791.1| tRNA-specific adenosine deaminase [Streptococcus pyogenes
           MGAS10270]
 gi|94991689|ref|YP_599788.1| tRNA-specific adenosine deaminase [Streptococcus pyogenes MGAS2096]
 gi|94993570|ref|YP_601668.1| tRNA-specific adenosine deaminase [Streptococcus pyogenes
           MGAS10750]
 gi|306828137|ref|ZP_07461400.1| cytidine/deoxycytidylate deaminase [Streptococcus pyogenes ATCC
           10782]
 gi|50902634|gb|AAT86349.1| tRNA-specific adenosine deaminase [Streptococcus pyogenes
           MGAS10394]
 gi|71801938|gb|AAX71291.1| tRNA-specific adenosine deaminase [Streptococcus pyogenes MGAS6180]
 gi|94541321|gb|ABF31370.1| tRNA-specific adenosine deaminase [Streptococcus pyogenes MGAS9429]
 gi|94543199|gb|ABF33247.1| tRNA-specific adenosine deaminase [Streptococcus pyogenes
           MGAS10270]
 gi|94545197|gb|ABF35244.1| tRNA-specific adenosine deaminase [Streptococcus pyogenes MGAS2096]
 gi|94547078|gb|ABF37124.1| tRNA-specific adenosine deaminase [Streptococcus pyogenes
           MGAS10750]
 gi|304429674|gb|EFM32720.1| cytidine/deoxycytidylate deaminase [Streptococcus pyogenes ATCC
           10782]
          Length = 179

 Score =  209 bits (534), Expect = 9e-53,   Method: Composition-based stats.
 Identities = 54/149 (36%), Positives = 80/149 (53%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +++   FM  AL+EA+ +  + EIP+G V V + +II R  N   E      HAE++AI 
Sbjct: 13  LEEQTYFMQEALKEAEKSLQKAEIPIGCVIVKDGEIIGRGHNAREESNQAIMHAEMMAIN 72

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
                     L +  L+VT+EPC MC+ AI LARI  + YGASN K GG ++  Q  T  
Sbjct: 73  EANAHEGNWRLLDTTLFVTIEPCVMCSGAIGLARIPHVIYGASNQKFGGADSLYQILTDE 132

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  ++  G+       I+Q FF++ R
Sbjct: 133 RLNHRVQVERGLLAADCANIMQTFFRQGR 161


>gi|283131371|dbj|BAI63375.1| tRNA-specific adenosine deaminase [Streptococcus dysgalactiae
           subsp. equisimilis]
 gi|283131431|dbj|BAI63432.1| tRNA-specific adenosine deaminase [Streptococcus dysgalactiae
           subsp. equisimilis]
          Length = 183

 Score =  209 bits (534), Expect = 9e-53,   Method: Composition-based stats.
 Identities = 53/149 (35%), Positives = 81/149 (54%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +++   FM  AL+EA+ +  + EIP+G V V + +II R  N   E      HAE++AI 
Sbjct: 13  LEEQTYFMQEALKEAEKSLQKAEIPIGCVIVKDGEIIGRGHNAREESNQAIMHAEMMAIN 72

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
                     L +  ++VT+EPC MC+ AI LARI  + YGASN K GG ++  Q  T  
Sbjct: 73  EANAYEGNWRLLDTTMFVTIEPCVMCSGAIGLARIPHVIYGASNQKFGGTDSLYQILTDE 132

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  ++  G+  +    I+Q FF++ R
Sbjct: 133 RLNHRVQVERGLLAEDCANIMQTFFRQGR 161


>gi|39995176|ref|NP_951127.1| cytidine/deoxycytidylate deaminase family protein [Geobacter
           sulfurreducens PCA]
 gi|39981938|gb|AAR33400.1| cytidine/deoxycytidylate deaminase family protein [Geobacter
           sulfurreducens PCA]
 gi|307634647|gb|ADI82903.2| tRNA (adenosine-34) deaminase [Geobacter sulfurreducens KN400]
          Length = 179

 Score =  209 bits (534), Expect = 9e-53,   Method: Composition-based stats.
 Identities = 54/149 (36%), Positives = 81/149 (54%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           ++    +M  A+ EA  AA R+E+P+GAV V +  +I R  N      D +AHAE++AIR
Sbjct: 9   IRDDAYWMGKAIREAAKAAARDEVPIGAVIVRDGAVIGRGHNLREGSNDPSAHAEMIAIR 68

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              R  +   L    LYVTLEPC MC  AI LAR+ R+ +G  +PKGG   +        
Sbjct: 69  QAARRSANWRLTGATLYVTLEPCLMCMGAIILARLERVVFGCYDPKGGAAGSLYDLSADP 128

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H   + PG+ ++    ++ DFF++ R
Sbjct: 129 RLNHQVRLSPGVCQEECGTMLSDFFRDLR 157


>gi|158424013|ref|YP_001525305.1| cytidine and deoxycytidylate deaminase family protein [Azorhizobium
           caulinodans ORS 571]
 gi|158330902|dbj|BAF88387.1| cytidine and deoxycytidylate deaminase family protein [Azorhizobium
           caulinodans ORS 571]
          Length = 147

 Score =  209 bits (534), Expect = 9e-53,   Method: Composition-based stats.
 Identities = 83/145 (57%), Positives = 108/145 (74%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
             FM  AL EA+ AA R E+PVGAV V N+++I+R GNR REL D TAHAE+  +R G +
Sbjct: 3   ETFMQTALSEARAAAERGEVPVGAVLVRNSQVIARDGNRTRELSDPTAHAEMQVLRAGAK 62

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
            L  E L   DLYVTLEPC MCA AIS ARIRRLYYGA +PKGG +++G +F+T  TCHH
Sbjct: 63  ALGAERLLTCDLYVTLEPCAMCAGAISFARIRRLYYGALDPKGGAVDSGPRFFTQPTCHH 122

Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149
           +P++Y GI+E+ S +I+++FF+ RR
Sbjct: 123 APDVYGGIAERHSAEILRNFFQARR 147


>gi|308389629|gb|ADO31949.1| cytidine and deoxycytidylate deaminase family protein [Neisseria
           meningitidis alpha710]
          Length = 239

 Score =  209 bits (534), Expect = 9e-53,   Method: Composition-based stats.
 Identities = 55/148 (37%), Positives = 81/148 (54%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           ++   FM  AL +A+ +A   EIPVGAV V + KII+ A N      +V+ HAEI A+  
Sbjct: 90  EEMEHFMREALRQAEQSAADGEIPVGAVIVSDGKIIASAHNTCIADCNVSCHAEINALAQ 149

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
               +    L   D+Y+TLEPC MCA+A+  ARIRR+ YGA+ PK G   +    +    
Sbjct: 150 AGSEMQNYRLDGCDIYITLEPCAMCASALIQARIRRVIYGAAEPKTGAAGSIVNLFADKR 209

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +    I  GI ++  R ++  FF+ +R
Sbjct: 210 LNTHTAIRGGILQEECRAVLSRFFQNKR 237


>gi|209694336|ref|YP_002262264.1| tRNA-specific adenosine deaminase [Aliivibrio salmonicida LFI1238]
 gi|208008287|emb|CAQ78433.1| tRNA-specific adenosine deaminase [Aliivibrio salmonicida LFI1238]
          Length = 177

 Score =  209 bits (534), Expect = 9e-53,   Method: Composition-based stats.
 Identities = 57/144 (39%), Positives = 80/144 (55%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           K    +M  A+E A  A    E+PVGAV VLN +II    NR+    D TAHAE++AI+ 
Sbjct: 8   KSATFYMQRAIELASIAEGEGEVPVGAVIVLNGEIIGEGWNRSIGTHDATAHAEMMAIKQ 67

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
             + +    L    LYVTLEPC MCA AI  +RI+++++GA++ K G   +    +T AT
Sbjct: 68  AGQTVENYRLVNATLYVTLEPCPMCAGAIVQSRIKQVFFGAADLKTGASGSVINLFTAAT 127

Query: 122 CHHSPEIYPGISEQRSRQIIQDFF 145
             H  E   G+     R+ +Q FF
Sbjct: 128 AFHFVECESGLMADECREQLQAFF 151


>gi|125624632|ref|YP_001033115.1| hypothetical protein llmg_1843 [Lactococcus lactis subsp. cremoris
           MG1363]
 gi|124493440|emb|CAL98414.1| conserved hypothetical protein [Lactococcus lactis subsp. cremoris
           MG1363]
 gi|300071423|gb|ADJ60823.1| hypothetical protein LLNZ_09485 [Lactococcus lactis subsp. cremoris
           NZ9000]
          Length = 155

 Score =  209 bits (534), Expect = 9e-53,   Method: Composition-based stats.
 Identities = 63/148 (42%), Positives = 88/148 (59%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           ++   FM+ AL+EAQ AA   E+P+G V V + +II+R  NR       T HAE+ AI  
Sbjct: 6   EEKEFFMTEALKEAQKAAENEEVPIGVVIVKDGEIIARDFNRRELDGRATHHAEVCAIEA 65

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
             + +    L +  L+VT+EPC MCA AI LARI ++Y+GA+NPK GG  +  Q      
Sbjct: 66  ANQAVGNWRLLDCALFVTIEPCVMCAGAIGLARIPQVYFGATNPKFGGTVSLYQILEDKR 125

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H  ++  GI E  S +I+QDFFK RR
Sbjct: 126 LNHRVQVESGILEYESAKIMQDFFKNRR 153


>gi|315500440|ref|YP_004089243.1| cmp/dcmp deaminase zinc-binding protein [Asticcacaulis excentricus
           CB 48]
 gi|315418452|gb|ADU15092.1| CMP/dCMP deaminase zinc-binding protein [Asticcacaulis excentricus
           CB 48]
          Length = 162

 Score =  209 bits (534), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 67/149 (44%), Positives = 99/149 (66%), Gaps = 2/149 (1%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNN--KIISRAGNRNRELKDVTAHAEILAIR 60
                M  AL+EA+ AA   E+P+GA+    +   II+RA N   +L D +AHAEILA+R
Sbjct: 2   TDKTLMRLALDEAEKAAQAGEVPIGALIYDPSSKTIIARAKNAPIKLNDPSAHAEILALR 61

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              +++    L ++ +YVTLEPC MCA A+S ARI R+ YGAS+PKGG +E+G +F+   
Sbjct: 62  AAGQVVGNYRLTDLWIYVTLEPCVMCAGALSHARIGRVIYGASDPKGGAVESGPRFFAQP 121

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
           TCH +PE+  G+ E  + Q+++DFF++RR
Sbjct: 122 TCHWAPEVTGGVLEAETGQVLKDFFRQRR 150


>gi|227820996|ref|YP_002824966.1| putative cytidine and deoxycytidylate deaminase [Sinorhizobium
           fredii NGR234]
 gi|227339995|gb|ACP24213.1| putative cytidine and deoxycytidylate deaminase [Sinorhizobium
           fredii NGR234]
          Length = 150

 Score =  209 bits (533), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 83/149 (55%), Positives = 109/149 (73%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M +   +M  AL+EA+ AA R E+P+GAV VL+ ++++ AGNR REL+D+TAHAEI AIR
Sbjct: 2   MAETTRYMDAALDEARKAAARGEVPIGAVVVLDGEVVAAAGNRTRELRDITAHAEIEAIR 61

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
                +  E L   DLYVTLEPCTMCAAAIS ARIRRLYYGA +PKGG +ENG +FY   
Sbjct: 62  QAAAAVGDERLSGADLYVTLEPCTMCAAAISFARIRRLYYGAEDPKGGAVENGVRFYGSP 121

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
           TCHH P++Y G++E+ +  +++ FF  RR
Sbjct: 122 TCHHVPDVYSGLAEREAADLLRAFFTARR 150


>gi|225016548|ref|ZP_03705740.1| hypothetical protein CLOSTMETH_00455 [Clostridium methylpentosum
           DSM 5476]
 gi|224950657|gb|EEG31866.1| hypothetical protein CLOSTMETH_00455 [Clostridium methylpentosum
           DSM 5476]
          Length = 254

 Score =  209 bits (533), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 56/138 (40%), Positives = 74/138 (53%), Gaps = 1/138 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  ALE+A  AA   E+PVGAV V   +++++A NR    K+  AHAE+LAI   CR L 
Sbjct: 1   MRLALEQAARAAELGEVPVGAVLVRGGEVVAQAYNRRETDKNALAHAELLAIDQACRALG 60

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
              L    LYVTLEPC MC  AI  ARI  + YGA + K G   +          +H P+
Sbjct: 61  GWRLFGATLYVTLEPCPMCTGAIINARIDHVVYGAKDQKAGSCGSVIDLTEYPY-NHKPQ 119

Query: 128 IYPGISEQRSRQIIQDFF 145
           +  G+ EQ    ++  FF
Sbjct: 120 LTGGVLEQECAGMLSQFF 137


>gi|30248454|ref|NP_840524.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Nitrosomonas europaea ATCC 19718]
 gi|30138340|emb|CAD84348.1| Cytidine and deoxycytidylate deaminase zinc-binding region
           [Nitrosomonas europaea ATCC 19718]
          Length = 167

 Score =  209 bits (533), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 52/148 (35%), Positives = 73/148 (49%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
            +   FM  AL+ A+ A    E+PVGAV V  ++I+    N      D TAHAEI A+R 
Sbjct: 12  TEDEYFMRQALDLARVAGAAGEVPVGAVMVRESRIVGCGHNCPVTTVDPTAHAEIRALRD 71

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
               +    LP   LYVTLEPC MC  A+  ARI RL Y A++PK G   +         
Sbjct: 72  AASRVGNYRLPGCTLYVTLEPCVMCIGAMFHARITRLVYAANDPKTGVCGSLLDLPADTR 131

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H   +  G+    +  +++ FF  +R
Sbjct: 132 LNHHLMVSQGVLADEAGTLLKQFFIAKR 159


>gi|90416322|ref|ZP_01224254.1| cytidine/deoxycytidylate deaminase family protein [marine gamma
           proteobacterium HTCC2207]
 gi|90332047|gb|EAS47261.1| cytidine/deoxycytidylate deaminase family protein [marine gamma
           proteobacterium HTCC2207]
          Length = 160

 Score =  209 bits (533), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 54/149 (36%), Positives = 80/149 (53%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M     FM  A+E A  AA   E+PVGA+ V   ++I    N+     D T HAEI+A+R
Sbjct: 1   MSLDEEFMGRAMELAHQAAAVGEVPVGALVVKEGRVIGEGYNQPITSCDPTGHAEIIAMR 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              + L    L   DLYVT+EPCTMC  A+  ARI ++ +GA  P+ G +E+  +    +
Sbjct: 61  NAAQTLGNYRLSGCDLYVTIEPCTMCVGAMVHARIGKIVFGAKEPRAGALESQLRLMDES 120

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +HS E   G+  ++   I+  FF+ +R
Sbjct: 121 HYNHSIEWQGGVLAEQCGAIMSGFFRAKR 149


>gi|283131444|dbj|BAI63444.1| tRNA-specific adenosine deaminase [Streptococcus dysgalactiae
           subsp. equisimilis]
          Length = 183

 Score =  209 bits (533), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 53/149 (35%), Positives = 81/149 (54%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +++   FM  AL+EA+ +  + EIP+G V V + +II R  N   E      HAE++AI 
Sbjct: 13  LEEQTYFMQEALKEAEKSLQKAEIPIGCVIVKDGEIIGRGHNAREESNQAIMHAEMMAIN 72

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
                     L +  ++VT+EPC MC+ AI LARI  + YGASN K GG ++  Q  T  
Sbjct: 73  EANAHEGNWRLLDTTMFVTIEPCVMCSGAIGLARIPHVIYGASNQKFGGTDSLYQILTDE 132

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  ++  G+  +    I+Q FF++ R
Sbjct: 133 RLNHRVQVERGLLAEDCANIMQTFFRQGR 161


>gi|255994527|ref|ZP_05427662.1| tRNA-specific adenosine deaminase [Eubacterium saphenum ATCC 49989]
 gi|255993240|gb|EEU03329.1| tRNA-specific adenosine deaminase [Eubacterium saphenum ATCC 49989]
          Length = 151

 Score =  209 bits (533), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 64/145 (44%), Positives = 83/145 (57%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
             FM  ALEEA+ A  + E+PVGAV V N K+IS+A N  R+ K+  AHAEILAI   C+
Sbjct: 3   EDFMRVALEEAKKAYKQGEVPVGAVIVKNGKVISKAHNETRQKKNAVAHAEILAIDKACK 62

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
            L  E L + ++YVTLEPC MCA AI  ARI  +  G  + K G              +H
Sbjct: 63  KLENERLVDTEMYVTLEPCAMCAGAIVQARIPEVMIGTRDLKSGAANTILNVLENEKLNH 122

Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149
             E+  GI E+   +I++ FFKE R
Sbjct: 123 RAELRFGIFEEECSEILKTFFKELR 147


>gi|21909689|ref|NP_663957.1| putative cytidine/deoxycytidylate deaminase family protein
           [Streptococcus pyogenes MGAS315]
 gi|56807966|ref|ZP_00365780.1| COG0590: Cytosine/adenosine deaminases [Streptococcus pyogenes M49
           591]
 gi|73921034|sp|Q8K8Q9|TADA_STRP3 RecName: Full=tRNA-specific adenosine deaminase
 gi|73921083|sp|Q5XE14|TADA_STRP6 RecName: Full=tRNA-specific adenosine deaminase
 gi|21903872|gb|AAM78760.1| putative cytidine/deoxycytidylate deaminase family protein
           [Streptococcus pyogenes MGAS315]
          Length = 171

 Score =  209 bits (533), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 54/149 (36%), Positives = 80/149 (53%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +++   FM  AL+EA+ +  + EIP+G V V + +II R  N   E      HAE++AI 
Sbjct: 5   LEEQTYFMQEALKEAEKSLQKAEIPIGCVIVKDGEIIGRGHNAREESNQAIMHAEMMAIN 64

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
                     L +  L+VT+EPC MC+ AI LARI  + YGASN K GG ++  Q  T  
Sbjct: 65  EANAHEGNWRLLDTTLFVTIEPCVMCSGAIGLARIPHVIYGASNQKFGGADSLYQILTDE 124

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  ++  G+       I+Q FF++ R
Sbjct: 125 RLNHRVQVERGLLAADCANIMQTFFRQGR 153


>gi|325577729|ref|ZP_08148004.1| tRNA-specific adenosine deaminase [Haemophilus parainfluenzae ATCC
           33392]
 gi|325160474|gb|EGC72600.1| tRNA-specific adenosine deaminase [Haemophilus parainfluenzae ATCC
           33392]
          Length = 172

 Score =  209 bits (533), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 58/143 (40%), Positives = 78/143 (54%), Gaps = 1/143 (0%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMG 62
              FM  AL  A  A    EIPVGAV V +   I+    N +    D TAHAEI+A+R  
Sbjct: 6   DEKFMQHALMLADRAEALGEIPVGAVLVGDEGNILGEGWNLSIIENDPTAHAEIVALRNA 65

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
            + +    L    LYVTLEPCTMCA AI  +RI+RL +GAS+ K G + +   F+     
Sbjct: 66  AQNIQNYRLLNTTLYVTLEPCTMCAGAILHSRIKRLVFGASDYKTGAVGSRFHFFDDYKM 125

Query: 123 HHSPEIYPGISEQRSRQIIQDFF 145
           +H+ EI  G+  ++  Q + DFF
Sbjct: 126 NHALEITSGVLAEKCGQKLSDFF 148


>gi|323128130|gb|ADX25427.1| tRNA-specific adenosine deaminase [Streptococcus dysgalactiae
           subsp. equisimilis ATCC 12394]
          Length = 175

 Score =  209 bits (533), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 53/149 (35%), Positives = 81/149 (54%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +++   FM  AL+EA+ +  + EIP+G V V + +II R  N   E      HAE++AI 
Sbjct: 5   LEEQTYFMQEALKEAEKSLQKAEIPIGCVIVKDGEIIGRGHNAREESNQAIMHAEMMAIN 64

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
                     L +  ++VT+EPC MC+ AI LARI  + YGASN K GG ++  Q  T  
Sbjct: 65  EANAYEGNWRLLDTTMFVTIEPCVMCSGAIGLARIPHVIYGASNQKFGGTDSLYQILTDE 124

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  ++  G+  +    I+Q FF++ R
Sbjct: 125 RLNHRVQVERGLLAEDCANIMQTFFRQGR 153


>gi|255975330|ref|ZP_05425916.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis T2]
 gi|307281893|ref|ZP_07562108.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Enterococcus faecalis TX0860]
 gi|255968202|gb|EET98824.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis T2]
 gi|306503847|gb|EFM73069.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Enterococcus faecalis TX0860]
          Length = 173

 Score =  209 bits (533), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 55/148 (37%), Positives = 81/148 (54%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           ++   FM  A+ EA+ A    E+P+G+V V   +II R  N     ++ TAHAE+ AI+ 
Sbjct: 11  EEKEFFMREAIAEAKKAEGLAEVPIGSVIVRQGEIIGRGHNLREARQEATAHAEMYAIQE 70

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
            CR +    L E  L+VTLEPC MC+ A+ LARI  +YYGA++PK G             
Sbjct: 71  ACRGIENWRLEETQLFVTLEPCPMCSGAMLLARIPEVYYGATDPKAGTAGTLMNLLEDER 130

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H   +  G+ E+  R ++  FFK+ R
Sbjct: 131 FNHVAYVEAGVLEEECRLLLVQFFKKLR 158


>gi|76789589|ref|YP_328675.1| tRNA-specific adenosine deaminase [Chlamydia trachomatis A/HAR-13]
 gi|237803276|ref|YP_002888470.1| Cytosine deaminase [Chlamydia trachomatis B/Jali20/OT]
 gi|237805197|ref|YP_002889351.1| Cytosine deaminase [Chlamydia trachomatis B/TZ1A828/OT]
 gi|76168119|gb|AAX51127.1| tRNA-specific adenosine deaminase [Chlamydia trachomatis A/HAR-13]
 gi|231273497|emb|CAX10413.1| Cytosine deaminase [Chlamydia trachomatis B/TZ1A828/OT]
 gi|231274510|emb|CAX11306.1| Cytosine deaminase [Chlamydia trachomatis B/Jali20/OT]
          Length = 163

 Score =  209 bits (533), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 59/149 (39%), Positives = 85/149 (57%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           ++K   FM  AL+EA+ A  ++E+PVG + V  +KII+R  N   +LKD TAHAE++ I 
Sbjct: 3   IEKDLFFMKKALDEARKAYEQDEVPVGCIIVHGDKIIARGHNSVEQLKDSTAHAEMICIS 62

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
                L    L +  LY TLEPC MCA AI LARI R+ +GA + + G   +    +   
Sbjct: 63  AAAEYLENWRLKDTILYCTLEPCLMCAGAIQLARIPRIVWGAPDLRLGAGGSWLNVFLEK 122

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
              H  E   G+  Q S Q++++FF E+R
Sbjct: 123 HPFHQVECCSGVCYQESEQLMKNFFLEKR 151


>gi|331270688|ref|YP_004397180.1| CMP/dCMP deaminase, zinc-binding protein [Clostridium botulinum
           BKT015925]
 gi|329127238|gb|AEB77183.1| CMP/dCMP deaminase, zinc-binding protein [Clostridium botulinum
           BKT015925]
          Length = 147

 Score =  209 bits (533), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 60/145 (41%), Positives = 83/145 (57%), Gaps = 1/145 (0%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
             FM  AL+EA+ A  + E+PVGAV V N K+I+ A N    LKD TAHAEILAI+  C 
Sbjct: 3   EEFMKLALKEAEIAKNKEEVPVGAVIVKNGKVIASAHNLRETLKDPTAHAEILAIKKACG 62

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
           IL    L E ++YVTLEPC MC  AI  +RI+++Y G  +P  G   +          + 
Sbjct: 63  ILGNWRLSECEMYVTLEPCPMCTGAIIQSRIKKIYIGTFDPVAGCCGSVVDLAQNRYLNT 122

Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149
             ++   I ++   +I+ +FFK RR
Sbjct: 123 MVDVTW-IYDKECSEILTNFFKNRR 146


>gi|239998824|ref|ZP_04718748.1| putative cytosine deaminase [Neisseria gonorrhoeae 35/02]
 gi|240014261|ref|ZP_04721174.1| putative cytosine deaminase [Neisseria gonorrhoeae DGI18]
 gi|240016697|ref|ZP_04723237.1| putative cytosine deaminase [Neisseria gonorrhoeae FA6140]
 gi|240121824|ref|ZP_04734786.1| putative cytosine deaminase [Neisseria gonorrhoeae PID24-1]
 gi|260440688|ref|ZP_05794504.1| putative cytosine deaminase [Neisseria gonorrhoeae DGI2]
 gi|268594667|ref|ZP_06128834.1| cytidine and deoxycytidylate deaminase [Neisseria gonorrhoeae
           35/02]
 gi|291043998|ref|ZP_06569714.1| cytidine and deoxycytidylate deaminase [Neisseria gonorrhoeae DGI2]
 gi|268548056|gb|EEZ43474.1| cytidine and deoxycytidylate deaminase [Neisseria gonorrhoeae
           35/02]
 gi|291012461|gb|EFE04450.1| cytidine and deoxycytidylate deaminase [Neisseria gonorrhoeae DGI2]
 gi|317164113|gb|ADV07654.1| putative cytosine deaminase [Neisseria gonorrhoeae TCDC-NG08107]
          Length = 239

 Score =  209 bits (533), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 55/148 (37%), Positives = 81/148 (54%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           ++   FM  AL +A+ +A   EIPVGAV V + KII+ A N      +V+ HAEI A+  
Sbjct: 90  EEMGYFMREALRQAEQSAADGEIPVGAVIVSDGKIIASAHNTCIADCNVSRHAEINALAQ 149

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
               +    L   D+Y+TLEPC MCA+A+  ARIRR+ YGA+ PK G   +    +    
Sbjct: 150 AGSEMQNYRLDGCDIYITLEPCAMCASALIQARIRRVIYGAAEPKTGAAGSIVNLFADKR 209

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +    I  GI ++  R ++  FF+ +R
Sbjct: 210 LNTHTAIRGGILQEECRAVLSRFFQNKR 237


>gi|240112750|ref|ZP_04727240.1| putative cytosine deaminase [Neisseria gonorrhoeae MS11]
 gi|240115501|ref|ZP_04729563.1| putative cytosine deaminase [Neisseria gonorrhoeae PID18]
 gi|240123350|ref|ZP_04736306.1| putative cytosine deaminase [Neisseria gonorrhoeae PID332]
 gi|240128054|ref|ZP_04740715.1| putative cytosine deaminase [Neisseria gonorrhoeae SK-93-1035]
 gi|254493609|ref|ZP_05106780.1| cytidine and deoxycytidylate deaminase [Neisseria gonorrhoeae 1291]
 gi|268598817|ref|ZP_06132984.1| cytidine and deoxycytidylate deaminase [Neisseria gonorrhoeae MS11]
 gi|268601174|ref|ZP_06135341.1| cytidine and deoxycytidylate deaminase [Neisseria gonorrhoeae
           PID18]
 gi|268681975|ref|ZP_06148837.1| cytidine and deoxycytidylate deaminase [Neisseria gonorrhoeae
           PID332]
 gi|268686443|ref|ZP_06153305.1| cytidine and deoxycytidylate deaminase [Neisseria gonorrhoeae
           SK-93-1035]
 gi|226512649|gb|EEH61994.1| cytidine and deoxycytidylate deaminase [Neisseria gonorrhoeae 1291]
 gi|268582948|gb|EEZ47624.1| cytidine and deoxycytidylate deaminase [Neisseria gonorrhoeae MS11]
 gi|268585305|gb|EEZ49981.1| cytidine and deoxycytidylate deaminase [Neisseria gonorrhoeae
           PID18]
 gi|268622259|gb|EEZ54659.1| cytidine and deoxycytidylate deaminase [Neisseria gonorrhoeae
           PID332]
 gi|268626727|gb|EEZ59127.1| cytidine and deoxycytidylate deaminase [Neisseria gonorrhoeae
           SK-93-1035]
          Length = 239

 Score =  209 bits (533), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 55/148 (37%), Positives = 81/148 (54%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           ++   FM  AL +A+ +A   EIPVGAV V + KII+ A N      +V+ HAEI A+  
Sbjct: 90  EEMGYFMREALRQAEQSAADGEIPVGAVIVSDGKIIASAHNTCIADCNVSRHAEINALAQ 149

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
               +    L   D+Y+TLEPC MCA+A+  ARIRR+ YGA+ PK G   +    +    
Sbjct: 150 AGSEMQNYRLDGCDIYITLEPCAMCASALIQARIRRVIYGAAEPKTGAAGSIVNLFADKR 209

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +    I  GI ++  R ++  FF+ +R
Sbjct: 210 LNTHTAIRGGILQEECRAVLSRFFQNKR 237


>gi|127512231|ref|YP_001093428.1| CMP/dCMP deaminase, zinc-binding [Shewanella loihica PV-4]
 gi|126637526|gb|ABO23169.1| tRNA-adenosine deaminase [Shewanella loihica PV-4]
          Length = 178

 Score =  209 bits (533), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 51/147 (34%), Positives = 79/147 (53%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
           K   +M  A+  A  A LR E+PVGA+ V ++ +I+   N +    D +AHAE+  IR  
Sbjct: 17  KDEAYMRQAMALAAQAELRGEVPVGALLVKDDSVIATGYNLSICRHDASAHAEMECIRAA 76

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
            +++    L +  LYVTLEPC MCA A+  ARI RL +GA++ K G   +       +  
Sbjct: 77  GQVMENYRLLDTTLYVTLEPCAMCAGAMVHARIGRLVFGAADLKTGAAGSVVDLVRSSAF 136

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H  E+  G+  +   + +  FF+ RR
Sbjct: 137 NHQLEVTAGVLAEDCGEQLSAFFRRRR 163


>gi|300691564|ref|YP_003752559.1| tRNA-specific adenosine deaminase [Ralstonia solanacearum PSI07]
 gi|299078624|emb|CBJ51281.1| tRNA-specific adenosine deaminase [Ralstonia solanacearum PSI07]
          Length = 169

 Score =  209 bits (533), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 53/148 (35%), Positives = 78/148 (52%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           ++   +M  AL +A+ A    E+PVGAV V  N+I+    N      D +AHAE+ A+R 
Sbjct: 5   ERDGYWMQQALVQARLAWGEGEVPVGAVVVRGNEIVGVGYNAPIGTHDPSAHAEMRALRQ 64

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
               L    LPE +++VTLEPC MCA A+  AR+ R+ YGA +PK G   +    +    
Sbjct: 65  AAVRLGNYRLPECEVFVTLEPCVMCAGAMLHARVARVVYGAPDPKTGAAGSVLDLFAETR 124

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H   I   +  Q    +++ FF ERR
Sbjct: 125 LNHQTAIIGSVLAQECGDMLRAFFAERR 152


>gi|300704191|ref|YP_003745793.1| tRNA-specific adenosine deaminase [Ralstonia solanacearum CFBP2957]
 gi|299071854|emb|CBJ43182.1| tRNA-specific adenosine deaminase [Ralstonia solanacearum CFBP2957]
          Length = 183

 Score =  209 bits (533), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 52/148 (35%), Positives = 78/148 (52%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           ++   +M  AL +A+ A    E+PVGAV V  N+I+    N      D +AHAE+ A+R 
Sbjct: 17  ERDGYWMQQALVQARLAWGEGEVPVGAVVVRGNEIVGVGYNAPIGTHDPSAHAEMRALRQ 76

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
               L    LPE +++VTLEPC MCA A+  AR+ R+ YGA +PK G   +    +    
Sbjct: 77  AAVTLGNYRLPECEVFVTLEPCVMCAGAMLHARVARVVYGAPDPKTGAAGSVLDLFAETR 136

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H   +   +  Q    +++ FF ERR
Sbjct: 137 LNHQTAMLGSVLAQECGDMLRAFFAERR 164


>gi|283131399|dbj|BAI63401.1| tRNA-specific adenosine deaminase [Streptococcus dysgalactiae
           subsp. equisimilis]
          Length = 175

 Score =  209 bits (533), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 54/149 (36%), Positives = 80/149 (53%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           + +   FM  AL+EA+ +  + EIP+G V V + +II R  N   E      HAE++AI 
Sbjct: 5   LDEQTYFMQEALKEAEKSLQKAEIPIGCVIVKDGEIIGRGHNAREESNQAIMHAEMMAIN 64

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
                     L +  L+VT+EPC MC+ AI LARI  + YGASN K GG ++  Q  T  
Sbjct: 65  EANAHEGNWRLLDTTLFVTIEPCVMCSGAIGLARIPHVIYGASNQKFGGTDSLYQILTDE 124

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  ++  G+  +    I+Q FF++ R
Sbjct: 125 RLNHRVQVERGLLAEDCANIMQTFFRQGR 153


>gi|291544028|emb|CBL17137.1| tRNA-adenosine deaminase [Ruminococcus sp. 18P13]
          Length = 151

 Score =  208 bits (532), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 55/149 (36%), Positives = 78/149 (52%), Gaps = 3/149 (2%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLN--NKIISRAGNRNRELKDVTAHAEILAIR 60
               +M  A+E A+ AA   EIPVGA+ V +   +++ R  NR     D TAHAE+LAIR
Sbjct: 2   DDFAYMRQAMELAEQAAALGEIPVGALVVQDATGEVLGRGYNRREVDHDPTAHAEVLAIR 61

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
                +    L    LYVTLEPC MC   I  AR+RR+ +GA + K G  ++    + L 
Sbjct: 62  QAALAIGSWRLSGCTLYVTLEPCPMCCGTIINARVRRVVFGAYDSKAGSADSVINLFALP 121

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H P +  G+ E   ++ +Q FF   R
Sbjct: 122 Y-NHKPAVTGGLLEDACKEQLQRFFSGLR 149


>gi|283131386|dbj|BAI63389.1| tRNA-specific adenosine deaminase [Streptococcus dysgalactiae
           subsp. equisimilis]
          Length = 183

 Score =  208 bits (532), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 54/149 (36%), Positives = 80/149 (53%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           + +   FM  AL+EA+ +  + EIP+G V V + +II R  N   E      HAE++AI 
Sbjct: 13  LDEQTYFMQEALKEAEKSLQKAEIPIGCVIVKDGEIIGRGHNAREESNQAIMHAEMMAIN 72

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
                     L +  L+VT+EPC MC+ AI LARI  + YGASN K GG ++  Q  T  
Sbjct: 73  EANAHEGNWRLLDTTLFVTIEPCVMCSGAIGLARIPHVIYGASNQKFGGTDSLYQILTDE 132

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  ++  G+  +    I+Q FF++ R
Sbjct: 133 RLNHRVQVERGLLAEDCANIMQTFFRQGR 161


>gi|46370356|gb|AAS89964.1| deaminase [Agrobacterium vitis]
          Length = 149

 Score =  208 bits (532), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 86/149 (57%), Positives = 108/149 (72%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M     FM  ALEEA+ A  R E+P+GAV V +  I+++AGN  R L+DVTAHAEILAIR
Sbjct: 1   MTLTTRFMDVALEEARLAGARGEVPIGAVLVKDGVILAQAGNETRALQDVTAHAEILAIR 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
             C IL  E L   DLYVTLEPCTMCAAAIS ARIRRLYYGA + KGGG+++G +FY+  
Sbjct: 61  RACTILEDERLAGADLYVTLEPCTMCAAAISFARIRRLYYGAPDEKGGGVDHGARFYSQP 120

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
           TCHH+P++Y GI E  +  +++DFF  +R
Sbjct: 121 TCHHAPDVYAGIGETEAAALLKDFFTTKR 149


>gi|260102436|ref|ZP_05752673.1| tRNA-specific adenosine deaminase [Lactobacillus helveticus DSM
           20075]
 gi|260083756|gb|EEW67876.1| tRNA-specific adenosine deaminase [Lactobacillus helveticus DSM
           20075]
          Length = 168

 Score =  208 bits (532), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 52/148 (35%), Positives = 82/148 (55%), Gaps = 1/148 (0%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRM 61
               +M  A+++A+ A  + E+P+GAV V    K+I    NR    +D T HAE++AI+ 
Sbjct: 6   DKKKYMELAIDQAKEAEKQGEVPIGAVVVDPEGKVIGTGYNRRELDEDSTQHAEMIAIKE 65

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
            C  L    L +  L+VTLEPC MCA AI  +RI+ +Y+GA +PK G   +    + +  
Sbjct: 66  ACHNLGMWRLIDCSLFVTLEPCPMCAGAIINSRIKDVYFGALDPKAGACGSVVDLFEVEK 125

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H P    G+   +  Q+++DFF+  R
Sbjct: 126 FNHHPHSISGLYRDQCAQMLKDFFRAIR 153


>gi|291532344|emb|CBL05457.1| tRNA-adenosine deaminase [Megamonas hypermegale ART12/1]
          Length = 159

 Score =  208 bits (532), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 59/150 (39%), Positives = 83/150 (55%), Gaps = 1/150 (0%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAI 59
           +K     M  AL EA+ A    EIP+GA+   +   IISR  N   +  D TAHAEI+AI
Sbjct: 6   IKNDIEGMKEALIEAKKAFAIGEIPIGAIICDDKGNIISRGHNLREKTFDATAHAEIVAI 65

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
           R  C  L    L ++ LYVT+EPC MCA AI  +R++RL YGA++ + GG E+       
Sbjct: 66  RKACTKLQNWRLSDLTLYVTVEPCPMCAGAIFSSRLKRLVYGATDWRAGGCESVFNIVNN 125

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
              +H  +I  G+ E     +++ FF+ RR
Sbjct: 126 HWLNHQTQIRAGVLEDECSLLVKKFFQTRR 155


>gi|313204491|ref|YP_004043148.1| cmp/dcmp deaminase zinc-binding protein [Paludibacter
           propionicigenes WB4]
 gi|312443807|gb|ADQ80163.1| CMP/dCMP deaminase zinc-binding protein [Paludibacter
           propionicigenes WB4]
          Length = 158

 Score =  208 bits (532), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 60/146 (41%), Positives = 82/146 (56%), Gaps = 5/146 (3%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
              FM  AL EAQ A  R+E+P+GAV V   +II+R  N    L DVTAHAE+ AI    
Sbjct: 17  DEYFMRQALMEAQRAGERDEVPIGAVIVCQGRIIARGHNLTETLTDVTAHAEMQAITAAA 76

Query: 64  RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123
           + L  + L +  LYVT+EPC MCA A+  ++I R+ YGAS+ K G +      +     H
Sbjct: 77  QFLGGKYLIDCSLYVTVEPCVMCAGALGWSQISRVVYGASDEKRGFVR-----FAPNALH 131

Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149
              EI  GI E    ++++ FFK +R
Sbjct: 132 PKTEIVSGILEADCSKLVKKFFKRKR 157


>gi|71907824|ref|YP_285411.1| tRNA-adenosine deaminase [Dechloromonas aromatica RCB]
 gi|71847445|gb|AAZ46941.1| tRNA-adenosine deaminase [Dechloromonas aromatica RCB]
          Length = 146

 Score =  208 bits (532), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 56/142 (39%), Positives = 77/142 (54%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  A+  A+ A    E+PVGAV VLN +I+ R  N      D TAHAEI A+R   R+L 
Sbjct: 1   MREAISLARAAECLGEVPVGAVVVLNGEIVGRGFNSPIGESDPTAHAEIAALRDAARVLG 60

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
              LP  +L+VTLEPC MCA AI  +RI R+ YGA +PK G   +    + +   +H   
Sbjct: 61  NYRLPGCELFVTLEPCAMCAGAIMHSRISRVIYGARDPKTGVHGSVVDLFGVERLNHHAT 120

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
           +  G+  +    ++  FF  RR
Sbjct: 121 VEGGVLAEECSTLLSGFFASRR 142


>gi|222147690|ref|YP_002548647.1| cytidine and deoxycytidylate deaminase [Agrobacterium vitis S4]
 gi|221734678|gb|ACM35641.1| cytidine and deoxycytidylate deaminase [Agrobacterium vitis S4]
          Length = 149

 Score =  208 bits (532), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 89/149 (59%), Positives = 108/149 (72%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M     FM  ALEEAQ A  R E+P+GAV V N  I++RAGN  R L+DVTAHAEILAIR
Sbjct: 1   MTLTIRFMDVALEEAQLAGARGEVPIGAVLVKNGVILARAGNETRALQDVTAHAEILAIR 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
             C IL  E L   DLYVTLEPCTMCAAAIS ARIRRLYYGA + KGGG+++G +FY+  
Sbjct: 61  RACAILEDERLAGADLYVTLEPCTMCAAAISFARIRRLYYGAPDEKGGGVDHGARFYSQP 120

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
           TCHH+P++Y GI E  +  +++DFF  +R
Sbjct: 121 TCHHAPDVYAGIGETEAAALLKDFFTAKR 149


>gi|78188173|ref|YP_378511.1| cytosine deaminase, putative [Chlorobium chlorochromatii CaD3]
 gi|78170372|gb|ABB27468.1| tRNA-adenosine deaminase [Chlorobium chlorochromatii CaD3]
          Length = 153

 Score =  208 bits (532), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 59/150 (39%), Positives = 82/150 (54%), Gaps = 1/150 (0%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAI 59
           M   N FMS AL EA  A  + E+PVGAV +  N  II R  N+   L D TAHAE++A+
Sbjct: 1   MIDFNTFMSAALREAIKAYEQREVPVGAVVLDSNGHIIGRGHNQVETLHDATAHAEMIAL 60

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
                 L  + L +  L VT+EPC MCA AI  A++ R+ +GA + K G           
Sbjct: 61  TAAMATLGNKYLDDCTLAVTMEPCPMCAGAIVNAKVGRVIFGAYDSKMGACGTVLNITGN 120

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
              +H PE++ GI E + ++++Q FFK  R
Sbjct: 121 RVLNHQPEVFGGIMEHKCQELLQSFFKSLR 150


>gi|224824536|ref|ZP_03697643.1| CMP/dCMP deaminase zinc-binding [Lutiella nitroferrum 2002]
 gi|224603029|gb|EEG09205.1| CMP/dCMP deaminase zinc-binding [Lutiella nitroferrum 2002]
          Length = 242

 Score =  208 bits (532), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 55/148 (37%), Positives = 82/148 (55%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           ++   FM+ A+  A+ AA   E+PVGAV V   +II R  NR     D +AHAE++A+R 
Sbjct: 92  EEAQRFMAEAIRLAKAAAAEGEVPVGAVVVKEGRIIGRGFNRPVTSHDPSAHAEMVALRE 151

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
               L    L   DLYVTLEPC MC  AI  +R+ R+ YGA +PK G   +    +    
Sbjct: 152 AAATLGNYRLSGCDLYVTLEPCPMCGGAILHSRLDRVIYGARDPKIGAAGSVLNLFGERA 211

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H   ++ GI  +   +++ +FF++RR
Sbjct: 212 LNHQTALFSGIEAEACGRLLSEFFRQRR 239


>gi|172036189|ref|YP_001802690.1| putative cytidine/deoxycytidylate deaminase [Cyanothece sp. ATCC
           51142]
 gi|171697643|gb|ACB50624.1| putative cytidine/deoxycytidylate deaminase [Cyanothece sp. ATCC
           51142]
          Length = 184

 Score =  208 bits (532), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 58/149 (38%), Positives = 77/149 (51%), Gaps = 1/149 (0%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +    +M  AL+ A  AA   ++PVGAV +   N II+   N   +  D T HAEI+AI 
Sbjct: 33  QTHCHWMRQALQLANKAAELGDVPVGAVIINHQNNIIAEGYNSKEQNHDPTGHAEIMAIH 92

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
               IL    L E  LYVTLEPC MCA AI  +R+  L YG  +PK G I         A
Sbjct: 93  RASEILQSWHLEECTLYVTLEPCIMCAGAIIQSRLGLLVYGLDDPKSGSIRTVLNLPDSA 152

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H   +  GI E   RQ ++D+F ++R
Sbjct: 153 ASNHRLSVLSGILEDECRQQLRDWFTDKR 181


>gi|322515941|ref|ZP_08068882.1| tRNA-specific adenosine deaminase [Streptococcus vestibularis ATCC
           49124]
 gi|322125615|gb|EFX96945.1| tRNA-specific adenosine deaminase [Streptococcus vestibularis ATCC
           49124]
          Length = 172

 Score =  208 bits (532), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 56/148 (37%), Positives = 83/148 (56%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           ++   FMS AL+EAQ +  + EIP+G V V + +I+ R  N   EL     HAE++AI+ 
Sbjct: 7   EEKEFFMSEALKEAQKSLDKAEIPIGCVIVKDREIVGRGHNAREELNQAIMHAEVMAIQE 66

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
             R +    L +  L+VT+EPC MC+ AI LARI ++ YGA N K GG  +         
Sbjct: 67  ANRTVGNWRLLDCTLFVTIEPCVMCSGAIGLARIPKVIYGACNQKFGGAGSLYDILRDER 126

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H  E+   + E    +I+QDFF++ R
Sbjct: 127 LNHRVEVETSVMEADCAKIMQDFFRQSR 154


>gi|254672230|emb|CBA05187.1| putative hydrolase protein [Neisseria meningitidis alpha275]
          Length = 197

 Score =  208 bits (531), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 55/148 (37%), Positives = 81/148 (54%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           ++   FM  AL +A+ +A   EIPVGAV V + KII+ A N      +V+ HAEI A+  
Sbjct: 48  EEMEHFMREALRQAEQSAADGEIPVGAVIVSDGKIIASAHNTCIADCNVSRHAEINALAQ 107

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
               +    L   D+Y+TLEPC MCA+A+  ARIRR+ YGA+ PK G   +    +    
Sbjct: 108 AGSEMQNYRLDGCDIYITLEPCAMCASALIQARIRRVIYGAAEPKTGAAGSIVNLFADKR 167

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +    I  GI ++  R ++  FF+ +R
Sbjct: 168 LNTHTAIRGGILQEECRAVLSRFFQNKR 195


>gi|322434989|ref|YP_004217201.1| CMP/dCMP deaminase zinc-binding protein [Acidobacterium sp.
           MP5ACTX9]
 gi|321162716|gb|ADW68421.1| CMP/dCMP deaminase zinc-binding protein [Acidobacterium sp.
           MP5ACTX9]
          Length = 292

 Score =  208 bits (531), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 65/149 (43%), Positives = 84/149 (56%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M     F+  A+ EA+ A    E+PVGAV VLNN+II+R  NR     D TAHAEI+A+R
Sbjct: 1   MTPDEQFLREAIAEARAAEQAGEVPVGAVLVLNNEIIARGRNRVILDSDPTAHAEIVALR 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              RIL    L   DLY TLEPC MCA AI  ARIRRL Y A++PK G   +        
Sbjct: 61  EAGRILGNYRLENCDLYTTLEPCAMCAGAILHARIRRLIYAAADPKAGACGSALDVMNHP 120

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  E+  G+  +   +++  FF+ RR
Sbjct: 121 RLNHRMEVAVGLLAEECGEMLTSFFRTRR 149


>gi|315222391|ref|ZP_07864296.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Streptococcus anginosus F0211]
 gi|315188552|gb|EFU22262.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Streptococcus anginosus F0211]
          Length = 155

 Score =  208 bits (531), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 58/148 (39%), Positives = 81/148 (54%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           ++   FM  AL+EA+ A   +EIP+G V V + KII    N   EL+    HAE++AI  
Sbjct: 6   EEKEEFMLEALKEAEIALANDEIPIGCVIVKDGKIIGHGHNAREELQRAVMHAEVMAIEE 65

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
                    L +  L+VT+EPC MC+ AI LARI ++ YGA N K G   +     T   
Sbjct: 66  ANAYEKSWRLLDTTLFVTIEPCVMCSGAIGLARIPQVIYGAKNQKFGAAGSLYDILTDER 125

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H  E+  GI E    Q++QDFF++RR
Sbjct: 126 LNHRVELENGILEAECAQMMQDFFRKRR 153


>gi|297193429|ref|ZP_06910827.1| deaminase [Streptomyces pristinaespiralis ATCC 25486]
 gi|297151779|gb|EDY67096.2| deaminase [Streptomyces pristinaespiralis ATCC 25486]
          Length = 176

 Score =  208 bits (531), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 52/142 (36%), Positives = 74/142 (52%), Gaps = 1/142 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  AL EA  AA   ++PVGAV +     I++   N      D TAHAE+LAIR    +L
Sbjct: 31  MRLALGEADRAAQGGDVPVGAVVLSGEGTILAVGHNEREATGDPTAHAEVLAIRRAAAVL 90

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
            +  L    L VTLEPCTMCA A+  +R+ R+ YGA + K G   +          +H P
Sbjct: 91  GEWRLTGCTLVVTLEPCTMCAGALVQSRVARVVYGARDDKAGAAGSLWDVVRDRRLNHRP 150

Query: 127 EIYPGISEQRSRQIIQDFFKER 148
           E+  G+  +   + +  FF++R
Sbjct: 151 EVVSGVLGEECSKQLTAFFRDR 172


>gi|167855119|ref|ZP_02477891.1| hypothetical protein HPS_06809 [Haemophilus parasuis 29755]
 gi|167853754|gb|EDS24996.1| hypothetical protein HPS_06809 [Haemophilus parasuis 29755]
          Length = 157

 Score =  208 bits (531), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 63/143 (44%), Positives = 76/143 (53%), Gaps = 1/143 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  AL  A  A    EIPVGAV V     II    NR   L D TAHAEI AIRM  + L
Sbjct: 1   MQYALSLADKAEAEGEIPVGAVLVDKTGNIIGEGWNRAIILSDPTAHAEIQAIRMAGQQL 60

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  LYVTLEPCTMCA AI  +RI RL +GAS+ K G + +    +     +H  
Sbjct: 61  QNYRLLDTTLYVTLEPCTMCAGAILHSRIGRLVFGASDYKTGALGSRFHLFEDYKMNHFL 120

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           +I  G+      Q I  FF++RR
Sbjct: 121 QIRGGVMANECSQKISAFFRKRR 143


>gi|77460805|ref|YP_350312.1| tRNA-adenosine deaminase [Pseudomonas fluorescens Pf0-1]
 gi|77384808|gb|ABA76321.1| putative deaminase [Pseudomonas fluorescens Pf0-1]
          Length = 165

 Score =  208 bits (531), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 56/148 (37%), Positives = 81/148 (54%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
            +   FM  ALE A   A   E+PVGAV V + +II R  N      D +AHAE++AIR 
Sbjct: 13  SRDRDFMREALELAAQGAALGEVPVGAVLVQDGEIIGRGFNCPISTSDPSAHAEMVAIRA 72

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
             + +    LP   LYVTLEPC+MCA  I  +R+ R+ +GA  PK G +++  QF+T   
Sbjct: 73  AAQAVDNYRLPGSTLYVTLEPCSMCAGLIVHSRVSRVVFGALEPKAGIVQSQGQFFTQGF 132

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H      G+  +    ++ +FF+ RR
Sbjct: 133 LNHRVLYEGGVLAEECGAVLTEFFRARR 160


>gi|295398379|ref|ZP_06808419.1| cytidine/deoxycytidylate deaminase [Aerococcus viridans ATCC 11563]
 gi|294973332|gb|EFG49119.1| cytidine/deoxycytidylate deaminase [Aerococcus viridans ATCC 11563]
          Length = 175

 Score =  208 bits (531), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 52/128 (40%), Positives = 72/128 (56%)

Query: 22  NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81
            E+P+GAV V   +II R  N     +D T HAEILAIR   R  +   L + DLYVTLE
Sbjct: 34  GEVPIGAVVVYQGEIIGRGHNLRETSQDATTHAEILAIREANRNRASWRLADADLYVTLE 93

Query: 82  PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141
           PC MC+ A+  +RIR +Y+GA + KGG           +  +H  E+  G+  +  + ++
Sbjct: 94  PCPMCSGAMIQSRIRHVYFGAYDQKGGTAGTLMNLLDDSRFNHQVEVIGGVMHEECKALL 153

Query: 142 QDFFKERR 149
           QDFF E R
Sbjct: 154 QDFFIELR 161


>gi|326317008|ref|YP_004234680.1| CMP/dCMP deaminase zinc-binding protein [Acidovorax avenae subsp.
           avenae ATCC 19860]
 gi|323373844|gb|ADX46113.1| CMP/dCMP deaminase zinc-binding protein [Acidovorax avenae subsp.
           avenae ATCC 19860]
          Length = 484

 Score =  208 bits (531), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 54/143 (37%), Positives = 74/143 (51%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
              +M  AL+EA  AA R EIPVGAV V   ++++R  N      D TAHAEI+A+R   
Sbjct: 19  DEDWMRVALQEAAEAAARGEIPVGAVVVRGGELVARGSNAPIAGHDPTAHAEIVALRAAA 78

Query: 64  RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123
             L    L    LYVTLEPC MC+ A+  AR+ R+ YGA + K G   +    +     +
Sbjct: 79  GRLGNYRLDGCTLYVTLEPCAMCSGAMLHARLDRVVYGAPDAKTGAAGSVVDLFAQPALN 138

Query: 124 HSPEIYPGISEQRSRQIIQDFFK 146
           H   I  G+  Q    ++  FF+
Sbjct: 139 HHTRIEGGVLAQECGALLSGFFQ 161


>gi|251783385|ref|YP_002997690.1| tRNA-specific adenosine deaminase [Streptococcus dysgalactiae
           subsp. equisimilis GGS_124]
 gi|242392017|dbj|BAH82476.1| tRNA-specific adenosine deaminase [Streptococcus dysgalactiae
           subsp. equisimilis GGS_124]
          Length = 175

 Score =  208 bits (531), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 53/149 (35%), Positives = 80/149 (53%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           + +   FM  AL+EA+ +  + EIP+G V V + +II R  N   E      HAE++AI 
Sbjct: 5   LDEQTYFMQEALKEAEKSLQKAEIPIGCVIVKDGEIIGRGHNAREESNQAIMHAEMMAIN 64

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
                     L +  ++VT+EPC MC+ AI LARI  + YGASN K GG ++  Q  T  
Sbjct: 65  EANAHEGNWRLLDTTMFVTIEPCVMCSGAIGLARIPHVIYGASNQKFGGTDSLYQILTDE 124

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  ++  G+  +    I+Q FF++ R
Sbjct: 125 RLNHRVQVERGLLAEDCANIMQTFFRQGR 153


>gi|269962366|ref|ZP_06176716.1| zinc-binding domain protein [Vibrio harveyi 1DA3]
 gi|269832862|gb|EEZ86971.1| zinc-binding domain protein [Vibrio harveyi 1DA3]
          Length = 164

 Score =  208 bits (531), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 54/142 (38%), Positives = 75/142 (52%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  A+E A+ A    E+PVGAV V + +I++   NR+    D TAHAEI  +R     L 
Sbjct: 1   MRRAMELAEQAEAEGEVPVGAVLVKDGEIVAEGWNRSICAHDATAHAEIQTLRKAGEALE 60

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
              L +  LYVTLEPC MCA A+  +R++R+ YGA + K G        +     +H   
Sbjct: 61  NYRLLDTTLYVTLEPCPMCAGALLHSRVKRVVYGAPDLKAGAAGTVLNLFKSQAAYHYAT 120

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
           +  G+ E   R  +Q FFK RR
Sbjct: 121 VESGLLEDECRSQLQAFFKRRR 142


>gi|85059758|ref|YP_455460.1| tRNA-specific adenosine deaminase [Sodalis glossinidius str.
           'morsitans']
 gi|84780278|dbj|BAE75055.1| conserved hypothetical protein [Sodalis glossinidius str.
           'morsitans']
          Length = 169

 Score =  208 bits (531), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 59/147 (40%), Positives = 75/147 (51%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
              V+M  AL  A  A    E+PVGAV VLN  II    NR+    D TAHAEI+A+R G
Sbjct: 6   SDEVWMRHALMLAGRAEAEGEVPVGAVLVLNGAIIGEGWNRSIGHHDPTAHAEIMALRQG 65

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
            +      L +  LYVTLEPC MCA A+  ARI RL +GA + K G   +          
Sbjct: 66  GQQAGNYRLLKATLYVTLEPCVMCAGAMIHARIGRLVFGARDEKTGAAGSLMDVLGHPGM 125

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H  E+   +  Q     + DFF+ RR
Sbjct: 126 NHRIELTGDMLAQACAAQLSDFFRRRR 152


>gi|91776192|ref|YP_545948.1| tRNA-adenosine deaminase [Methylobacillus flagellatus KT]
 gi|91710179|gb|ABE50107.1| tRNA-adenosine deaminase [Methylobacillus flagellatus KT]
          Length = 168

 Score =  208 bits (531), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 59/146 (40%), Positives = 72/146 (49%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
              FM  AL+ AQ AAL  E+PVGAV V +  +I R  N      D +AHAEI A+R   
Sbjct: 12  DEDFMRIALQLAQEAALAGEVPVGAVVVKDGVVIGRGSNAPIAYHDPSAHAEIRAMRDAA 71

Query: 64  RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123
             L    L    LYVTLEPC MCA AI  ARI RL +GA + K G   +          +
Sbjct: 72  ARLGNYRLTGCALYVTLEPCAMCAGAIQHARIARLVFGAHDYKTGACGSVIDLMAEERLN 131

Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149
           H   +  G+  Q     +  FF ERR
Sbjct: 132 HHTLVKSGVLVQECSATLTQFFAERR 157


>gi|159794935|pdb|2NX8|A Chain A, The Crystal Structure Of The Trna-Specific Adenosine
           Deaminase From Streptococcus Pyogenes
          Length = 179

 Score =  208 bits (531), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 53/149 (35%), Positives = 81/149 (54%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +++   FM  AL+E++ +  + EIP+G V V + +II R  N   E      HAE++AI 
Sbjct: 13  LEEQTYFMQEALKESEKSLQKAEIPIGCVIVKDGEIIGRGHNAREESNQAIMHAEMMAIN 72

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
                     L +  L+VT+EPC MC+ AI LARI  + YGASN K GG+++  Q  T  
Sbjct: 73  EANAHEGNWRLLDTTLFVTIEPCVMCSGAIGLARIPHVIYGASNQKFGGVDSLYQILTDE 132

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  ++  G+       I+Q FF++ R
Sbjct: 133 RLNHRVQVERGLLAADCANIMQTFFRQGR 161


>gi|19745357|ref|NP_606493.1| hypothetical protein spyM18_0196 [Streptococcus pyogenes MGAS8232]
 gi|73921072|sp|Q8P2R7|Y196_STRP8 RecName: Full=Uncharacterized deaminase spyM18_0196
 gi|19747462|gb|AAL96992.1| conserved hypothetical protein [Streptococcus pyogenes MGAS8232]
          Length = 159

 Score =  208 bits (531), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 54/149 (36%), Positives = 80/149 (53%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +++   FM  AL+EA+ +  + EIP+G V V + +II R  N   E      HAE++AI 
Sbjct: 5   LEEQTYFMQEALKEAEKSLQKAEIPIGCVIVKDGEIIGRGHNAREESNQAIMHAEMMAIN 64

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
                     L +  L+VT+EPC MC+ AI LARI  + YGASN K GG ++  Q  T  
Sbjct: 65  EANAHEGNWRLLDTTLFVTIEPCVMCSGAIGLARIPHVIYGASNQKFGGADSLYQILTDE 124

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  ++  G+       I+Q FF++ R
Sbjct: 125 RLNHRVQVERGLLAADCANIMQTFFRQGR 153


>gi|15605579|ref|NP_220365.1| cytosine deaminase [Chlamydia trachomatis D/UW-3/CX]
 gi|3329316|gb|AAC68441.1| cytosine deaminase [Chlamydia trachomatis D/UW-3/CX]
 gi|297748972|gb|ADI51518.1| tRNA-specific adenosine deaminase [Chlamydia trachomatis D-EC]
 gi|297749852|gb|ADI52530.1| tRNA-specific adenosine deaminase [Chlamydia trachomatis D-LC]
          Length = 163

 Score =  208 bits (530), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 58/149 (38%), Positives = 84/149 (56%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           ++K   FM  AL+EA+ A  ++E+PVG + V  +KII+R  N   +LKD T HAE++ I 
Sbjct: 3   IEKDLFFMKKALDEARKAYEQDEVPVGCIIVHGDKIIARGHNSVEQLKDPTVHAEMICIS 62

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
                L    L +  LY TLEPC MCA AI LARI R+ +GA + + G   +    +   
Sbjct: 63  AAAEYLENWRLKDTILYCTLEPCLMCAGAIQLARIPRIVWGAPDLRLGAGGSWLNVFLEK 122

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
              H  E   G+  Q S Q++++FF E+R
Sbjct: 123 HPFHQVECCSGVCYQESEQLMKNFFLEKR 151


>gi|218768019|ref|YP_002342531.1| putative cytosine deaminase [Neisseria meningitidis Z2491]
 gi|121052027|emb|CAM08336.1| putative cytosine deaminase [Neisseria meningitidis Z2491]
          Length = 239

 Score =  208 bits (530), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 54/148 (36%), Positives = 81/148 (54%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           ++   FM  AL +A+ +A   EIPVGAV V + KII+ A N      +V+ HAEI A+  
Sbjct: 90  EEMEHFMCEALRQAEQSAADGEIPVGAVIVSDGKIIASAHNTCIADCNVSRHAEINALAQ 149

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
             R +    L   D+Y+TLEPC MCA+A+  AR++R+ YGA  PK G   +    +    
Sbjct: 150 AGREMQNYRLDGCDIYITLEPCAMCASALIQARVKRVIYGAGEPKTGAAGSIVNLFADKR 209

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +    I  GI ++  R ++  FF+ +R
Sbjct: 210 LNTHTAIRGGILQEECRAVLSRFFQNKR 237


>gi|241760058|ref|ZP_04758156.1| cytidine and deoxycytidylate deaminase family protein [Neisseria
           flavescens SK114]
 gi|241319512|gb|EER55942.1| cytidine and deoxycytidylate deaminase family protein [Neisseria
           flavescens SK114]
          Length = 240

 Score =  208 bits (530), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 53/148 (35%), Positives = 81/148 (54%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
                FM  A+E+A+ +A   E+PVGAV V   + I+ A N      +V+ HAEI A+  
Sbjct: 90  SDMEAFMRLAIEQARQSAALGEVPVGAVIVYQGEAIAAAHNTCIGDHNVSHHAEINALAT 149

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
             + L    L + D+Y+TLEPC+MCA+A+  AR+ R+ YGA+ PK GG  +    +    
Sbjct: 150 AGKALQNYRLEDCDVYITLEPCSMCASALIQARVGRVIYGAAEPKTGGAGSVVDLFADKR 209

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +    I  GI  +  + ++QDFF  +R
Sbjct: 210 LNKHTAILGGILAEECQSVLQDFFAAKR 237


>gi|261377687|ref|ZP_05982260.1| tRNA-specific adenosine deaminase [Neisseria cinerea ATCC 14685]
 gi|269145955|gb|EEZ72373.1| tRNA-specific adenosine deaminase [Neisseria cinerea ATCC 14685]
          Length = 239

 Score =  208 bits (530), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 55/145 (37%), Positives = 79/145 (54%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
             FM  AL +A+ +AL  EIPVGAV V + KII+ A N      +V+ HAEI A+     
Sbjct: 93  EYFMRQALVQAEMSALMGEIPVGAVIVSDGKIIASAHNTCIADCNVSRHAEINALAQASS 152

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
            +    L   D+Y+TLEPC MCA+A+  ARI+R+ YGA  PK G   +    +     + 
Sbjct: 153 EMQNYRLDGCDIYITLEPCAMCASALIQARIKRVIYGAVEPKTGAAGSIVNLFADKRLNT 212

Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149
              I  GI ++  R ++  FF+ +R
Sbjct: 213 HTAIRGGILQEECRSVLSCFFQNKR 237


>gi|255546921|ref|XP_002514518.1| conserved hypothetical protein [Ricinus communis]
 gi|223546122|gb|EEF47624.1| conserved hypothetical protein [Ricinus communis]
          Length = 1624

 Score =  208 bits (530), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 63/165 (38%), Positives = 81/165 (49%), Gaps = 17/165 (10%)

Query: 2    KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
            K   +FM  AL EA+ AA   E+PVGAV V + KII+R  N   EL+D TAHAE++ IR 
Sbjct: 1098 KIDEMFMREALLEAKKAADTWEVPVGAVLVQHGKIIARGYNLVEELRDSTAHAEMICIRE 1157

Query: 62   GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL-- 119
                L    L E  LYVTLEPC MCA AI  ARI  + +GA N   G   +  + +    
Sbjct: 1158 ASNQLRSWRLAETTLYVTLEPCPMCAGAILQARIDTVVWGAPNKLLGADGSWIRLFPNGG 1217

Query: 120  ---------------ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
                              H + +I  GI       ++Q FF+ RR
Sbjct: 1218 GGSGSELVDKPPAPVHPFHPNMKIRRGILAPECADVMQQFFQLRR 1262


>gi|121634737|ref|YP_974982.1| putative cytosine deaminase [Neisseria meningitidis FAM18]
 gi|120866443|emb|CAM10189.1| putative cytosine deaminase (EC 3.5.4.1) [Neisseria meningitidis
           FAM18]
 gi|325132183|gb|EGC54879.1| tRNA-specific adenosine deaminase [Neisseria meningitidis M6190]
 gi|325136130|gb|EGC58739.1| tRNA-specific adenosine deaminase [Neisseria meningitidis M0579]
 gi|325198167|gb|ADY93623.1| tRNA-specific adenosine deaminase [Neisseria meningitidis G2136]
 gi|325202278|gb|ADY97732.1| tRNA-specific adenosine deaminase [Neisseria meningitidis
           M01-240149]
          Length = 239

 Score =  208 bits (530), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 57/144 (39%), Positives = 81/144 (56%)

Query: 6   VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
            FM  ALE+A+ +AL  EIPVGAV V + KII+ A N      +V+ HAEI A+      
Sbjct: 94  HFMGLALEQAKLSALMGEIPVGAVIVSDGKIIASAHNTCIADCNVSRHAEINALAQAGSE 153

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           +    L   D+Y+TLEPC MCA+A+  ARIRR+ YGA+ PK G   +    +     +  
Sbjct: 154 MQNYRLDGCDIYITLEPCAMCASALIQARIRRVIYGAAEPKTGAAGSIVNLFADKRLNTH 213

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
             I  GI ++  R ++  FF+ +R
Sbjct: 214 TAIRGGILQEECRAVLSRFFQNKR 237


>gi|33152629|ref|NP_873982.1| hypothetical protein HD1591 [Haemophilus ducreyi 35000HP]
 gi|33148853|gb|AAP96371.1| conserved hypothetical protein [Haemophilus ducreyi 35000HP]
          Length = 183

 Score =  208 bits (530), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 59/148 (39%), Positives = 79/148 (53%), Gaps = 1/148 (0%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRM 61
           +    M  AL  A+ A    EIPVGAV V +   II    N+   L D +AHAEILAIR 
Sbjct: 26  QDIQLMQYALTLAKRAETMGEIPVGAVLVDSKGNIIGEGWNQVIALSDPSAHAEILAIRQ 85

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
               L    L +  LYVTLEPCTMCA AI  +R+ RL +GAS+ K G I +    +    
Sbjct: 86  ASHRLQNYRLLDCTLYVTLEPCTMCAGAILHSRLSRLVFGASDYKTGAIGSRFHLFEDYK 145

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H   +  G+ ++   + I +FF+ RR
Sbjct: 146 MNHLLTVQGGVLKEACSKQISEFFQRRR 173


>gi|261367117|ref|ZP_05980000.1| tRNA-specific adenosine deaminase [Subdoligranulum variabile DSM
           15176]
 gi|282571240|gb|EFB76775.1| tRNA-specific adenosine deaminase [Subdoligranulum variabile DSM
           15176]
          Length = 153

 Score =  208 bits (530), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 60/147 (40%), Positives = 86/147 (58%), Gaps = 1/147 (0%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
                M  ALEEA+ AA   E+PVGAV   + +I++RA N     K+ T HAE+LAI   
Sbjct: 2   TDEQLMQVALEEARIAAALGEVPVGAVIAKDGEIVARAHNLRERGKNATYHAELLAIDAA 61

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
           C+ L    L + +L+VTLEPC MC+ AI  +R+RR+ YGA +PK G     T  + L   
Sbjct: 62  CKALGGWRLWQCELFVTLEPCPMCSGAIINSRLRRVVYGARDPKAGCCGGLTDLFALP-F 120

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H P I  G+ ++ ++ ++QDFF   R
Sbjct: 121 NHHPVIEQGLLQEDAQALLQDFFVMLR 147


>gi|161506947|ref|YP_001576901.1| cytidine/deoxycytidylate deaminase, zinc-binding region
           [Lactobacillus helveticus DPC 4571]
 gi|160347936|gb|ABX26610.1| Cytidine/deoxycytidylate deaminase, zinc-binding region
           [Lactobacillus helveticus DPC 4571]
          Length = 168

 Score =  208 bits (530), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 52/148 (35%), Positives = 82/148 (55%), Gaps = 1/148 (0%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRM 61
               +M  A+++A+ A  + E+P+GAV V    K+I    NR    +D T HAE++AI+ 
Sbjct: 6   DKKKYMELAIDQAKEAEKQGEVPIGAVVVDPEGKVIGTGYNRRELDEDSTQHAEMIAIKE 65

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
            C  L    L +  L+VTLEPC MCA AI  +RI+ +Y+GA +PK G   +    + +  
Sbjct: 66  ACHNLGMWRLIDCSLFVTLEPCPMCAGAIINSRIKNVYFGALDPKAGACGSVVDLFEVEK 125

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H P    G+   +  Q+++DFF+  R
Sbjct: 126 FNHHPHSIRGLYRDQCAQMLKDFFRAIR 153


>gi|332526241|ref|ZP_08402370.1| tRNA-adenosine deaminase [Rubrivivax benzoatilyticus JA2]
 gi|332110075|gb|EGJ10703.1| tRNA-adenosine deaminase [Rubrivivax benzoatilyticus JA2]
          Length = 188

 Score =  208 bits (530), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 55/148 (37%), Positives = 82/148 (55%), Gaps = 4/148 (2%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNN----KIISRAGNRNRELKDVTAHAEIL 57
           ++    M+ AL++AQNA L  E+PVGAV +       ++++   NR     D TAHAEI+
Sbjct: 9   ERDLHAMAIALDQAQNAWLVGEVPVGAVIMRPGPEGPQVLATGYNRPITTHDPTAHAEIV 68

Query: 58  AIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFY 117
           A+R    +L    LPE +LYVTLEPC MCA A+  AR +R+ YGA +PK G   +    +
Sbjct: 69  ALRHAATLLGNYRLPECELYVTLEPCAMCAMALMHARFKRIVYGAPDPKTGAAGSVVDLF 128

Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDFF 145
                +H  +I  G+       +++ FF
Sbjct: 129 ADRRLNHHTQIVGGVMAAECGDLLRRFF 156


>gi|301154746|emb|CBW14209.1| tRNA-specific adenosine deaminase [Haemophilus parainfluenzae T3T1]
          Length = 172

 Score =  208 bits (530), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 58/143 (40%), Positives = 78/143 (54%), Gaps = 1/143 (0%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMG 62
              FM  AL  A  A    EIPVGAV V +   I+    N +    D TAHAEI+A+R  
Sbjct: 6   DEKFMQHALMLADRAEALGEIPVGAVLVDDEGNILGEGWNLSIIEHDPTAHAEIVALRNA 65

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
            + +    L    LYVTLEPCTMCA AI  +RI+RL +GAS+ K G + +   F+     
Sbjct: 66  AQNIQNYRLLNTTLYVTLEPCTMCAGAILHSRIKRLVFGASDYKTGAVGSRFHFFDDYKM 125

Query: 123 HHSPEIYPGISEQRSRQIIQDFF 145
           +H+ EI  G+  ++  Q + DFF
Sbjct: 126 NHTLEITSGVLVEKCGQKLSDFF 148


>gi|296436400|gb|ADH18574.1| cytosine deaminase [Chlamydia trachomatis G/9768]
 gi|296438259|gb|ADH20420.1| cytosine deaminase [Chlamydia trachomatis G/11074]
 gi|297140760|gb|ADH97518.1| cytosine deaminase [Chlamydia trachomatis G/9301]
          Length = 163

 Score =  208 bits (530), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 58/149 (38%), Positives = 85/149 (57%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           ++K   FM  AL+EA+ A  ++E+PVG + V  +KII+R  N   +LKD TAHAE++ + 
Sbjct: 3   IEKDLFFMKKALDEARKAYEQDEVPVGCIIVHGDKIIARGHNSVEQLKDPTAHAEMICVS 62

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
                L    L +  LY TLEPC MCA AI LARI R+ +GA + + G   +    +   
Sbjct: 63  AAAEYLENWRLKDTILYCTLEPCLMCAGAIQLARIPRIVWGAPDLRLGAGGSWLNVFLEK 122

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
              H  E   G+  Q S Q++++FF E+R
Sbjct: 123 HPFHQVECCSGVCYQESEQLMKNFFLEKR 151


>gi|170723352|ref|YP_001751040.1| CMP/dCMP deaminase zinc-binding [Pseudomonas putida W619]
 gi|169761355|gb|ACA74671.1| CMP/dCMP deaminase zinc-binding [Pseudomonas putida W619]
          Length = 159

 Score =  208 bits (530), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 57/148 (38%), Positives = 82/148 (55%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
            +   FM  AL+ A   A   E+PVGAV V + ++I +  NR     D +AHAE++AIR 
Sbjct: 9   SRDQEFMRMALDLAAQGAALGEVPVGAVLVQHGQVIGQGFNRPIIDSDPSAHAEMVAIRA 68

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
             +  S   LP   LYVTLEPC+MCA  I  +R+ R+ YGA  PK G +++  QF++   
Sbjct: 69  AAKSASNYRLPGSTLYVTLEPCSMCAGLIVHSRVARVVYGALEPKAGIVQSQGQFFSQGF 128

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H      G+  +    I+ +FFK RR
Sbjct: 129 LNHRVMFEGGVLAEECGAILSEFFKARR 156


>gi|82702354|ref|YP_411920.1| cytidine/deoxycytidylate deaminase, zinc-binding region
           [Nitrosospira multiformis ATCC 25196]
 gi|82410419|gb|ABB74528.1| tRNA-adenosine deaminase [Nitrosospira multiformis ATCC 25196]
          Length = 163

 Score =  208 bits (530), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 56/148 (37%), Positives = 75/148 (50%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
                FM  ALE +  A    E+PVGA+ V N  I+ R  N      D TAHAE++A+R 
Sbjct: 3   SSDAGFMHVALELSAQAEQAGEVPVGAIVVRNGTIVGRGYNCPISTSDPTAHAEVMALRD 62

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
             R L    L +  LYVTLEPC MC  AI  ARI RL YGA++PK G   +         
Sbjct: 63  AGRHLGNYRLGDCTLYVTLEPCAMCMGAIFHARIARLVYGAADPKTGACGSVINLSAELR 122

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H  ++  G+  +     ++ FF +RR
Sbjct: 123 LNHHLQVTRGVLAEEGGYKLKQFFAKRR 150


>gi|121604898|ref|YP_982227.1| CMP/dCMP deaminase [Polaromonas naphthalenivorans CJ2]
 gi|120593867|gb|ABM37306.1| CMP/dCMP deaminase, zinc-binding protein [Polaromonas
           naphthalenivorans CJ2]
          Length = 411

 Score =  208 bits (530), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 61/147 (41%), Positives = 86/147 (58%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
               FM  AL +A+ AA   E+PVGAV V   K+I+   N   E  D TAHAEI+A+R  
Sbjct: 2   SDEAFMEMALVQARVAAAFGEVPVGAVVVRQGKVIATGRNAPVEAHDPTAHAEIMALRAA 61

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
              L    L E +L+VTLEPC MC+ A+  AR++R+ +GAS PK G   +    +  A  
Sbjct: 62  ALALGNYRLDECELFVTLEPCAMCSGAMLNARLKRVVFGASEPKTGAAGSVINLFAQARL 121

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H  E+  G+  + SR ++QDFF++RR
Sbjct: 122 NHQTELQGGVLAESSRALLQDFFRQRR 148


>gi|240949642|ref|ZP_04753977.1| tRNA-adenosine deaminase, cytosine/adenosine deaminases
           [Actinobacillus minor NM305]
 gi|240295900|gb|EER46576.1| tRNA-adenosine deaminase, cytosine/adenosine deaminases
           [Actinobacillus minor NM305]
          Length = 150

 Score =  208 bits (530), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 65/143 (45%), Positives = 78/143 (54%), Gaps = 1/143 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  AL  A  A    EIPVGAV +  N KI+    NR+  L D TAHAEI AIRM    L
Sbjct: 1   MQYALSLADKAEQEGEIPVGAVLIDKNGKILGEGWNRSIILSDSTAHAEIQAIRMAGEQL 60

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  LYVTLEPCTMCA AI  +RI RL +GAS+ K G I +    +     +H  
Sbjct: 61  QNYRLLDTTLYVTLEPCTMCAGAILHSRIGRLVFGASDYKTGAIGSRFHLFEDYKMNHFL 120

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           +I  G+      Q I  FFK+RR
Sbjct: 121 QIRGGVMRDECSQKISAFFKKRR 143


>gi|56478507|ref|YP_160096.1| cytosine/adenosine deaminase [Aromatoleum aromaticum EbN1]
 gi|56314550|emb|CAI09195.1| probable cytosine/adenosine deaminases [Aromatoleum aromaticum
           EbN1]
          Length = 154

 Score =  208 bits (530), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 52/147 (35%), Positives = 80/147 (54%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
               FM  ALE+A+ A   +E+PVGAV VL+ +I+ R  N+     D +AHAE++A+R  
Sbjct: 2   SDEDFMRAALEQARMAGACDEVPVGAVVVLDGEIVGRGFNQPIRRHDPSAHAEVMALRDA 61

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
              L     P  +L+VTLEPC MC+ AI  AR+ R+ +GA +P+ G   +    +     
Sbjct: 62  GERLGNYRFPGCELFVTLEPCAMCSGAIMHARVARVVFGARDPRTGVAGSIIDLFAERRL 121

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H  E+  G+      +++  FF  RR
Sbjct: 122 NHHAEVAGGVLADECGRLLSGFFAARR 148


>gi|225163582|ref|ZP_03725891.1| CMP/dCMP deaminase zinc-binding [Opitutaceae bacterium TAV2]
 gi|224801817|gb|EEG20104.1| CMP/dCMP deaminase zinc-binding [Opitutaceae bacterium TAV2]
          Length = 202

 Score =  207 bits (529), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 52/149 (34%), Positives = 79/149 (53%), Gaps = 1/149 (0%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           +    +MS A  +A +A  R+E+P+G V   + ++I+ A N      D TAHAE+LAI  
Sbjct: 32  RDDVFYMSLAYNQAIDAWRRDEVPIGCVIERSGEVIASAHNGVESANDPTAHAEMLAITQ 91

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
               L    L E  LYVT EPC MC+ A  ++R++R+ Y   +PK G +   T    L  
Sbjct: 92  AASALGDWRLEECTLYVTKEPCPMCSGATLMSRLKRVCYAVPDPKMGCLGGATDLNALPR 151

Query: 122 CHHSPEIY-PGISEQRSRQIIQDFFKERR 149
            +H   I   G+ E   R ++Q FF+++R
Sbjct: 152 VNHHLGITAGGVLEDECRVLLQTFFRQKR 180


>gi|313112820|ref|ZP_07798467.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Faecalibacterium cf. prausnitzii KLE1255]
 gi|310624890|gb|EFQ08198.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Faecalibacterium cf. prausnitzii KLE1255]
          Length = 160

 Score =  207 bits (529), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 58/147 (39%), Positives = 87/147 (59%), Gaps = 1/147 (0%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
             +  M  ALEEA+ AA   E+PVGAV   N ++++ A N     K+   HAE+LAI   
Sbjct: 2   TDSELMGLALEEARKAAALGEVPVGAVVARNGEVVAAAHNTRETEKNALHHAELLAIDAA 61

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
           C+ L    L E +L+VTLEPC MCA AI  +RIRR+ YGA++ K G   + T  + +   
Sbjct: 62  CKKLGGWRLWECELFVTLEPCPMCAGAIINSRIRRVVYGAADTKAGCCGSVTDLFAMP-F 120

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H P +  G+  + +++++Q FFK+ R
Sbjct: 121 NHHPVVEQGLRAEEAQELLQAFFKDLR 147


>gi|254463267|ref|ZP_05076683.1| cytosine deaminase [Rhodobacterales bacterium HTCC2083]
 gi|206679856|gb|EDZ44343.1| cytosine deaminase [Rhodobacteraceae bacterium HTCC2083]
          Length = 157

 Score =  207 bits (529), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 74/147 (50%), Positives = 91/147 (61%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
           K   FM  AL EA+ A    E+PVGAV V +  II R  N  R   D +AHAEILAIR  
Sbjct: 10  KFTSFMEAALVEARLAEAAGEVPVGAVVVKDGAIIGRGRNATRTGCDPSAHAEILAIREA 69

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
           C +L Q+ L + DLYVTLEPC MCA AI+ AR+ RLYYGAS+PK GG+  G + +  A  
Sbjct: 70  CAVLGQDRLVDCDLYVTLEPCAMCAGAIAHARVARLYYGASDPKSGGVTVGARVFDHAQS 129

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           HH PE+Y GI    S  ++  FF  +R
Sbjct: 130 HHRPEVYDGIGADESGALLSAFFARKR 156


>gi|67922696|ref|ZP_00516200.1| Cytidine/deoxycytidylate deaminase, zinc-binding region
           [Crocosphaera watsonii WH 8501]
 gi|67855478|gb|EAM50733.1| Cytidine/deoxycytidylate deaminase, zinc-binding region
           [Crocosphaera watsonii WH 8501]
          Length = 165

 Score =  207 bits (529), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 59/149 (39%), Positives = 81/149 (54%), Gaps = 1/149 (0%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIR 60
           +    +M  AL   Q AA   ++PVGAV +    K+I++  N   +  D TAHAEI+AIR
Sbjct: 10  ETHCYWMKQALNLGQEAAKAGDVPVGAVIIDSQGKLIAQGLNCKEQNHDPTAHAEIIAIR 69

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              + L    L +  LYVTLEPC MCA AI  +R+  L YG  +PK G I +       A
Sbjct: 70  QATQKLHSWYLNKCTLYVTLEPCIMCAGAIIHSRLGLLVYGVDDPKSGTIRSVLNLPDSA 129

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H   +  GI E   RQ +QD+FK++R
Sbjct: 130 ASNHRLSVLSGILEAECRQQLQDWFKQKR 158


>gi|320547592|ref|ZP_08041877.1| tRNA-specific adenosine deaminase [Streptococcus equinus ATCC 9812]
 gi|320447667|gb|EFW88425.1| tRNA-specific adenosine deaminase [Streptococcus equinus ATCC 9812]
          Length = 168

 Score =  207 bits (529), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 58/148 (39%), Positives = 81/148 (54%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           ++   FM  AL+EAQ +  + EIP+G V V + +II R  N   E +    HAEI+AI  
Sbjct: 7   EEKEFFMREALKEAQKSLEKEEIPIGCVIVKDGEIIGRGHNAREEQQKAILHAEIMAINE 66

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
                    L +  L+VT+EPC MC+ AI LARI ++ YGA+N K GG  +     T   
Sbjct: 67  ANENEGNWRLLDSMLFVTIEPCVMCSGAIGLARIPQVIYGAANQKFGGAGSLYDILTDIR 126

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H  E+  GI E     I+QDFF++ R
Sbjct: 127 LNHRVEVETGILEAECAGIMQDFFRKNR 154


>gi|222153804|ref|YP_002562981.1| deaminase [Streptococcus uberis 0140J]
 gi|222114617|emb|CAR43628.1| putative deaminase [Streptococcus uberis 0140J]
          Length = 167

 Score =  207 bits (529), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 53/148 (35%), Positives = 77/148 (52%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           ++   FM  AL+EA+ +  + EIP+G V V   +II R  N   E      HAEI+AI  
Sbjct: 6   EEKEFFMREALKEAKKSLDKGEIPIGCVIVKEGRIIGRGHNAREERNQAIMHAEIMAINE 65

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
               +    L +  L+VT+EPC MC+ AI LARI ++ +GA N K GG  +     T   
Sbjct: 66  ANATVGNWRLLDTTLFVTIEPCVMCSGAIGLARIPQVIFGAHNQKFGGAGSLYAILTDQR 125

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H  E+  G+  +    I+Q FF+  R
Sbjct: 126 LNHRVELETGLLAEECAAIMQTFFRAGR 153


>gi|116493223|ref|YP_804958.1| tRNA-adenosine deaminase [Pediococcus pentosaceus ATCC 25745]
 gi|116103373|gb|ABJ68516.1| tRNA-adenosine deaminase [Pediococcus pentosaceus ATCC 25745]
          Length = 161

 Score =  207 bits (529), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 52/145 (35%), Positives = 84/145 (57%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           N +M+ A++EAQ A + +E+P+GAV V + KII R  N     +D T HAE+LAI   C 
Sbjct: 10  NFYMNEAIKEAQFAKMIDEVPIGAVVVHDGKIIGRGHNLREHSQDSTTHAEVLAITEACA 69

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
            L    L +  L+VT+EPC MC+  I  +++ ++++GA +PK G + +          +H
Sbjct: 70  YLKSWRLWDCQLFVTIEPCLMCSGTIINSQLPQVFFGARDPKAGAVRSLYTVLEDTRLNH 129

Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149
              ++ GI   R+  +++ FFKE R
Sbjct: 130 QVTVHEGIEADRASMLMKTFFKEIR 154


>gi|261252226|ref|ZP_05944799.1| tRNA-specific adenosine-34 deaminase [Vibrio orientalis CIP 102891]
 gi|260935617|gb|EEX91606.1| tRNA-specific adenosine-34 deaminase [Vibrio orientalis CIP 102891]
          Length = 178

 Score =  207 bits (529), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 51/143 (35%), Positives = 76/143 (53%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
           +   FM  A+E A +A  + E+PVGAV V + +II+   N +    D TAHAE+  IR  
Sbjct: 9   QDERFMRRAMELAAHAETQGEVPVGAVLVKDGEIIAEGWNESIGQHDATAHAEMQTIRKA 68

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
             +L    L +  LYVTLEPC MCA A+  +R++R+ +GA + K G        +     
Sbjct: 69  GEVLENYRLLDTTLYVTLEPCPMCAGALLHSRVKRIVFGAPDLKAGAAGTVLNLFEHQAA 128

Query: 123 HHSPEIYPGISEQRSRQIIQDFF 145
           +H  ++  G+ E   R  +Q FF
Sbjct: 129 YHYADVEKGLLEDECRVQLQAFF 151


>gi|118602884|ref|YP_904099.1| CMP/dCMP deaminase, zinc-binding [Candidatus Ruthia magnifica str.
           Cm (Calyptogena magnifica)]
 gi|118567823|gb|ABL02628.1| CMP/dCMP deaminase, zinc-binding protein [Candidatus Ruthia
           magnifica str. Cm (Calyptogena magnifica)]
          Length = 156

 Score =  207 bits (529), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 57/147 (38%), Positives = 82/147 (55%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
               +M+ A+E+A+ A   NE+PVGA+ + NN++IS A N+     D TAHAEI  +R  
Sbjct: 7   TDAQWMTLAIEQAKQAQKVNEVPVGAILIQNNQLISSAYNQPISNNDPTAHAEIQLLRAA 66

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
            + L+   L +  LYVTLEPCTMC  AI  AR+  + +GA + K G   +          
Sbjct: 67  GKQLNNYRLYDTTLYVTLEPCTMCLGAIVHARVSYIVFGAYDQKSGVCGSCINLQNSQCF 126

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +HS  I  GI   + + ++Q FFK RR
Sbjct: 127 NHSINIQGGILADQCKDLLQQFFKSRR 153


>gi|15834852|ref|NP_296611.1| cytidine/deoxycytidylate deaminase family protein [Chlamydia
           muridarum Nigg]
 gi|301336416|ref|ZP_07224618.1| cytidine/deoxycytidylate deaminase family protein [Chlamydia
           muridarum MopnTet14]
 gi|8163170|gb|AAF73539.1| cytidine/deoxycytidylate deaminase family protein [Chlamydia
           muridarum Nigg]
          Length = 157

 Score =  207 bits (529), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 59/149 (39%), Positives = 82/149 (55%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           ++K   FM  AL+EA+ A   +E+PVG + V  + II+R  N    LKD TAHAE++ I 
Sbjct: 3   IEKDLFFMKKALDEARKAYELDEVPVGCIIVQGDAIIARGHNSVERLKDPTAHAEMICIS 62

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
                L    L +  LY TLEPC MCA AI LARI R+ +GA + + G   +    +   
Sbjct: 63  AAAEYLQNWRLKDTTLYCTLEPCLMCAGAIQLARIPRIVWGAPDLRLGAGGSWLNVFLEK 122

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
              H  E  PGI  Q S  ++++FF E+R
Sbjct: 123 HPFHQVECCPGICHQESEWLMKNFFWEKR 151


>gi|15676827|ref|NP_273972.1| cytidine and deoxycytidylate deaminase family protein [Neisseria
           meningitidis MC58]
 gi|7226171|gb|AAF41340.1| cytidine and deoxycytidylate deaminase family protein [Neisseria
           meningitidis MC58]
 gi|316985330|gb|EFV64279.1| cytidine and deoxycytidylate deaminase zinc-binding region family
           protein [Neisseria meningitidis H44/76]
 gi|325140176|gb|EGC62703.1| tRNA-specific adenosine deaminase [Neisseria meningitidis CU385]
 gi|325200381|gb|ADY95836.1| tRNA-specific adenosine deaminase [Neisseria meningitidis H44/76]
          Length = 239

 Score =  207 bits (529), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 55/148 (37%), Positives = 82/148 (55%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           ++   FM  AL +A+ ++   EIPVGAV V + KII+ A N      +V+ HAEI A+  
Sbjct: 90  EEMEHFMCEALRQAEQSSADGEIPVGAVIVSDGKIIASAHNTCIADCNVSRHAEINALAQ 149

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
             R +    L   D+Y+TLEPC MCA+A+  ARIRR+ YGA+ PK G   +    +    
Sbjct: 150 AGREIQNYRLDGCDIYITLEPCAMCASALIQARIRRVIYGAAEPKTGAAGSIVNLFADKR 209

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +    I  GI ++  R ++  FF+ +R
Sbjct: 210 LNTHTAIRGGILQEECRAVLSRFFQNKR 237


>gi|325204006|gb|ADY99459.1| tRNA-specific adenosine deaminase [Neisseria meningitidis
           M01-240355]
          Length = 239

 Score =  207 bits (529), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 55/148 (37%), Positives = 82/148 (55%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           ++   FM  AL +A+ ++   EIPVGAV V + KII+ A N      +V+ HAEI A+  
Sbjct: 90  EEMEHFMCEALRQAEQSSADGEIPVGAVIVSDGKIIASAHNTCIADCNVSRHAEINALAQ 149

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
             R +    L   D+Y+TLEPC MCA+A+  ARIRR+ YGA+ PK G   +    +    
Sbjct: 150 AGREIQNYRLDGCDIYITLEPCAMCASALIQARIRRVIYGAAEPKTGAAGSIVNLFADKR 209

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +    I  GI ++  R ++  FF+ +R
Sbjct: 210 LNTHTAIRGGILQEECRAVLSRFFQNKR 237


>gi|313668625|ref|YP_004048909.1| cytosine deaminase [Neisseria lactamica ST-640]
 gi|313006087|emb|CBN87548.1| putative cytosine deaminase (EC 3.5.4.1) [Neisseria lactamica
           020-06]
          Length = 239

 Score =  207 bits (529), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 55/144 (38%), Positives = 80/144 (55%)

Query: 6   VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
            FM  ALE+A+ +AL  EIPVGAV V + KII+ A N      +V+ HAEI A+      
Sbjct: 94  HFMGLALEQAKLSALMGEIPVGAVIVSDGKIIASAHNTCIADCNVSRHAEINALAQAGSK 153

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           +    L   D+Y+TLEPC MCA+A+  AR++R+ YGA  PK G   +    +     +  
Sbjct: 154 IQNYRLDGCDIYITLEPCAMCASALIQARVKRVIYGAGEPKTGAAGSIVNLFADKRLNTH 213

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
             I  GI ++  R ++  FF+ +R
Sbjct: 214 TAIRGGILQEECRAVLSRFFQNKR 237


>gi|283131456|dbj|BAI63455.1| tRNA-specific adenosine deaminase [Streptococcus dysgalactiae
           subsp. equisimilis]
          Length = 183

 Score =  207 bits (529), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 53/149 (35%), Positives = 80/149 (53%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           + +   FM  AL+EA+ +  + EIP+G V V + +II R  N   E      HAE++AI 
Sbjct: 13  LDEQTYFMQEALKEAEKSLQKAEIPIGCVIVKDGEIIGRGHNVREESNQAIMHAEMMAIN 72

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
                     L +  ++VT+EPC MC+ AI LARI  + YGASN K GG ++  Q  T  
Sbjct: 73  EANAHEGNWRLLDTTMFVTIEPCVMCSGAIGLARIPHVIYGASNQKFGGTDSLYQILTDE 132

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  ++  G+  +    I+Q FF++ R
Sbjct: 133 RLNHRVQVERGLLAEDCANIMQTFFRQGR 161


>gi|326798488|ref|YP_004316307.1| CMP/dCMP deaminase zinc-binding protein [Sphingobacterium sp. 21]
 gi|326549252|gb|ADZ77637.1| CMP/dCMP deaminase zinc-binding protein [Sphingobacterium sp. 21]
          Length = 156

 Score =  207 bits (529), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 55/147 (37%), Positives = 78/147 (53%), Gaps = 5/147 (3%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
               FM  AL EAQ A   +E+P+GAV V + KII+R  N    L DVTAHAE+ A    
Sbjct: 14  SDEFFMKEALREAQKAFDADEVPIGAVIVHDGKIIARGHNLTETLNDVTAHAEMQAFTAA 73

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
              +  + L +  LYVT+EPC MCA A   ++I+R+ +GA + K G              
Sbjct: 74  ANYIGGKYLKDCTLYVTIEPCVMCAGASYWSQIKRIVFGARDEKRGYATISKDIV----- 128

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           H    +  GI E+  R+++Q FF+ +R
Sbjct: 129 HPKTTVVSGIMEETCRELMQRFFQLKR 155


>gi|149369606|ref|ZP_01889458.1| putative cytosine/adenosine deaminase [unidentified eubacterium
           SCB49]
 gi|149357033|gb|EDM45588.1| putative cytosine/adenosine deaminase [unidentified eubacterium
           SCB49]
          Length = 152

 Score =  207 bits (529), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 57/147 (38%), Positives = 82/147 (55%), Gaps = 6/147 (4%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
               FM  A +EA+ A  + EIP+GAV V +NKII+RA N    L DVTAHAE+ AI   
Sbjct: 9   DDTYFMKRAFQEAETAYSQGEIPIGAVIVADNKIIARAHNLTETLNDVTAHAEMQAITAA 68

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
              L  + L    LYVT+EPC MCA A+  ++I  + YGA + + G +E GT+       
Sbjct: 69  ANYLGGKYLKGCTLYVTIEPCQMCAGALYWSQISNVVYGARDEQRGCLEMGTKL------ 122

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           H   ++  G+  +    +++ FF E+R
Sbjct: 123 HPKTKMTGGVLAEECATLLKRFFIEKR 149


>gi|134297898|ref|YP_001111394.1| CMP/dCMP deaminase [Desulfotomaculum reducens MI-1]
 gi|134050598|gb|ABO48569.1| tRNA-adenosine deaminase [Desulfotomaculum reducens MI-1]
          Length = 151

 Score =  207 bits (529), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 64/147 (43%), Positives = 87/147 (59%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
              +FM  AL EAQ AA++ E+P+GAV V  +++I R  +    L D +AHAEILA+R  
Sbjct: 2   SHALFMREALIEAQKAAVKGEVPIGAVVVWKDEVIGRGYDLRESLCDASAHAEILAMRKA 61

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
            + L    L +  LYVT+EPC MCA AI   RI RL YGA N K G ++        A  
Sbjct: 62  AKHLGDWRLNDATLYVTVEPCAMCAGAIVQFRINRLVYGAPNAKSGSVDTILNIVQEARF 121

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H  E+  GI E + ++IIQ+FF+E R
Sbjct: 122 NHRVEVIAGILEDQCKEIIQNFFRELR 148


>gi|323142068|ref|ZP_08076916.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Phascolarctobacterium sp. YIT 12067]
 gi|322413455|gb|EFY04326.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Phascolarctobacterium sp. YIT 12067]
          Length = 166

 Score =  207 bits (529), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 58/149 (38%), Positives = 81/149 (54%), Gaps = 2/149 (1%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVL--NNKIISRAGNRNRELKDVTAHAEILAIR 60
           +   +M  AL EA+ AA   EIP+GAV       ++I+ A N      D TAHAE++ IR
Sbjct: 2   EDKKYMQLALAEARKAAELGEIPIGAVLADMTTGEVIAAAHNMRETWHDATAHAEVIVIR 61

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
             C  L +  L    LYVT+EPC MC+ AI   R+ R+ YG  + K GG E+     T  
Sbjct: 62  EACERLGRWRLSGCALYVTVEPCPMCSGAIVNGRVDRVVYGCHDVKAGGAESIFNIITNP 121

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  E+  GI E+   Q+++DFF+ RR
Sbjct: 122 NLNHCAEVISGICEEECAQVMRDFFRRRR 150


>gi|224368847|ref|YP_002603009.1| putative riboflavin biosynthesis protein ribD [Desulfobacterium
           autotrophicum HRM2]
 gi|223691564|gb|ACN14847.1| putative riboflavin biosynthesis protein ribD [Desulfobacterium
           autotrophicum HRM2]
          Length = 150

 Score =  207 bits (529), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 63/148 (42%), Positives = 87/148 (58%), Gaps = 1/148 (0%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRM 61
               +M  ALEEA+ AA  +E+PVGAV V    +I++R  N+   L D TAHAE+LA+RM
Sbjct: 2   NDLFYMKIALEEAEKAARMDEVPVGAVLVDGTGRILARTHNQPITLCDPTAHAEMLALRM 61

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
           G        LP   LY T+EPC MC  AI  AR+ R+ YGA +PK G   +   F   A 
Sbjct: 62  GGEKTGNYRLPGATLYSTIEPCVMCMGAIIHARLSRIVYGACDPKWGAAGSLYNFAFDAR 121

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H+ EI PG+ +  + +II+ FF+ +R
Sbjct: 122 LNHTLEIVPGVCKDEATEIIRGFFRNKR 149


>gi|89901064|ref|YP_523535.1| CMP/dCMP deaminase [Rhodoferax ferrireducens T118]
 gi|89345801|gb|ABD70004.1| CMP/dCMP deaminase, zinc-binding [Rhodoferax ferrireducens T118]
          Length = 363

 Score =  207 bits (529), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 53/149 (35%), Positives = 82/149 (55%), Gaps = 1/149 (0%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M      M  AL +A  AAL  E+PVGAV + +  +I+   N + E +D +AHAEI+A+R
Sbjct: 15  MTDDQA-MQLALTQAGLAALAGEVPVGAVVLKDGVLIASGRNASIETQDPSAHAEIVALR 73

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
                L    L   +L+VTLEPC MC  A+  AR++R+ YGA +PK G   +    +   
Sbjct: 74  AAALALGNYRLDGCELFVTLEPCAMCVGAMLHARLQRVVYGAPDPKTGAAGSVLDLFANP 133

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  E+  G+      +++Q FF+++R
Sbjct: 134 QLNHHTEVQGGVLADACAELLQRFFQQKR 162


>gi|258625208|ref|ZP_05720121.1| zinc-binding domain protein [Vibrio mimicus VM603]
 gi|258582498|gb|EEW07334.1| zinc-binding domain protein [Vibrio mimicus VM603]
          Length = 157

 Score =  207 bits (528), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 54/142 (38%), Positives = 77/142 (54%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  A+  A  A  + E+PVGAV V + +II+   N +    D TAHAEI  IR   ++LS
Sbjct: 1   MRRAIMLAAQAEEQGEVPVGAVLVRDGEIIAEGWNCSITHHDATAHAEIEVIRKAGKVLS 60

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
              L +  LYVTLEPC MCA A+  +R++R+ YGA + K G        +     +H   
Sbjct: 61  NYRLLDTTLYVTLEPCPMCAGALLHSRVKRIVYGAPDLKAGAAGTVMDLFNSQASYHYAT 120

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
           +  G+ E+  R  +Q FF+ RR
Sbjct: 121 VEKGLLEEECRAQLQAFFQRRR 142


>gi|59801336|ref|YP_208048.1| putative cytosine deaminase [Neisseria gonorrhoeae FA 1090]
 gi|194098422|ref|YP_002001481.1| putative cytosine deaminase [Neisseria gonorrhoeae NCCP11945]
 gi|240080887|ref|ZP_04725430.1| putative cytosine deaminase [Neisseria gonorrhoeae FA19]
 gi|240117796|ref|ZP_04731858.1| putative cytosine deaminase [Neisseria gonorrhoeae PID1]
 gi|240125599|ref|ZP_04738485.1| putative cytosine deaminase [Neisseria gonorrhoeae SK-92-679]
 gi|268597004|ref|ZP_06131171.1| cytidine and deoxycytidylate deaminase [Neisseria gonorrhoeae FA19]
 gi|268603495|ref|ZP_06137662.1| cytidine and deoxycytidylate deaminase [Neisseria gonorrhoeae PID1]
 gi|268684187|ref|ZP_06151049.1| cytidine and deoxycytidylate deaminase [Neisseria gonorrhoeae
           SK-92-679]
 gi|59718231|gb|AAW89636.1| putative cytosine deaminase [Neisseria gonorrhoeae FA 1090]
 gi|193933712|gb|ACF29536.1| putative cytosine deaminase [Neisseria gonorrhoeae NCCP11945]
 gi|268550792|gb|EEZ45811.1| cytidine and deoxycytidylate deaminase [Neisseria gonorrhoeae FA19]
 gi|268587626|gb|EEZ52302.1| cytidine and deoxycytidylate deaminase [Neisseria gonorrhoeae PID1]
 gi|268624471|gb|EEZ56871.1| cytidine and deoxycytidylate deaminase [Neisseria gonorrhoeae
           SK-92-679]
          Length = 239

 Score =  207 bits (528), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 55/148 (37%), Positives = 81/148 (54%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           ++   FM  AL +A+ +A   EIPVGAV V + KII+ A N      +V+ HAEI A+  
Sbjct: 90  EEMGYFMREALRQAEQSAADGEIPVGAVIVSDGKIITSAHNTCIADCNVSRHAEINALAQ 149

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
               +    L   D+Y+TLEPC MCA+A+  ARIRR+ YGA+ PK G   +    +    
Sbjct: 150 AGSEMQNYRLDGCDIYITLEPCAMCASALIQARIRRVIYGAAEPKTGAAGSIVNLFADKR 209

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +    I  GI ++  R ++  FF+ +R
Sbjct: 210 LNTHTAIRGGILQEECRAVLSRFFQNKR 237


>gi|322412766|gb|EFY03674.1| putative cytidine/deoxycytidylate deaminase family protein
           [Streptococcus dysgalactiae subsp. dysgalactiae ATCC
           27957]
          Length = 175

 Score =  207 bits (528), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 52/149 (34%), Positives = 80/149 (53%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           + +   FM  AL+EA+ +  + EIP+G V V + +II R  N   E      HAE++AI 
Sbjct: 5   LDEQTYFMQEALKEAEKSLQKAEIPIGCVIVKDGEIIGRGHNAREESNQAIMHAEMMAIN 64

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
                     L +  ++VT+EPC MC+ AI LARI  + YGA+N K GG ++  Q  T  
Sbjct: 65  EANAHEGNWRLLDTTMFVTIEPCVMCSGAIGLARIPHVIYGANNQKFGGTDSLYQILTDE 124

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  ++  G+  +    I+Q FF++ R
Sbjct: 125 RLNHRVQVERGLLAEDCANIMQTFFRQGR 153


>gi|62185341|ref|YP_220126.1| putative cytidine/deoxycytidylate deaminase family protein
           [Chlamydophila abortus S26/3]
 gi|62148408|emb|CAH64175.1| putative cytidine/deoxycytidylate deaminase family protein
           [Chlamydophila abortus S26/3]
          Length = 157

 Score =  207 bits (528), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 61/149 (40%), Positives = 86/149 (57%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           ++K   FM+ AL+EA+ A   +E+PVG V V +NKII+R  N   +L+D TAHAEIL I 
Sbjct: 3   IEKDIFFMNQALKEARQAYDEDEVPVGCVIVKDNKIIARGHNTTEKLQDPTAHAEILCIG 62

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              + L    L +  LY TLEPC MCA AI LARIRR+ + A + + G   +    +   
Sbjct: 63  AAAQYLENWRLVDTVLYCTLEPCLMCAGAIQLARIRRIVWAAPDLRLGAGGSWLNVFKEK 122

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
              H  E + GI    + Q+++ FF E+R
Sbjct: 123 HPFHQVECFFGICCADAEQLMKQFFIEKR 151


>gi|154508436|ref|ZP_02044078.1| hypothetical protein ACTODO_00935 [Actinomyces odontolyticus ATCC
           17982]
 gi|153798070|gb|EDN80490.1| hypothetical protein ACTODO_00935 [Actinomyces odontolyticus ATCC
           17982]
          Length = 435

 Score =  207 bits (528), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 54/143 (37%), Positives = 69/143 (48%), Gaps = 1/143 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  AL  A  A    ++PVGAV V  N +II R  N      D   HAEI+A+R   R  
Sbjct: 1   MGKALFLANRARETGDVPVGAVVVDENGRIIGRGWNCREANHDPAGHAEIVALREAGRSR 60

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L    L VTLEPCTMCA AI  +RI R+ +GA +PK G   +       A   H  
Sbjct: 61  GTWRLTGCTLIVTLEPCTMCAGAILASRIDRVVFGAWDPKAGAAGSLRDVLRDARMPHPT 120

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+  G+  Q +   ++ FF   R
Sbjct: 121 EVIGGVLAQEAAMQLRSFFLSCR 143


>gi|309380104|emb|CBX21515.1| unnamed protein product [Neisseria lactamica Y92-1009]
          Length = 239

 Score =  207 bits (528), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 57/145 (39%), Positives = 81/145 (55%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
             FM  ALE+A+ +AL  EIPVGAV V + KII+ A N      +V+ HAEI A+     
Sbjct: 93  EHFMGLALEQAKLSALMGEIPVGAVIVSDGKIIASAHNTCIADCNVSRHAEINALAQAGS 152

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
            +    L   D+Y+TLEPC MCA+A+  ARIRR+ YGA+ PK G   +    +     + 
Sbjct: 153 EMQNYRLDGCDIYITLEPCAMCASALIQARIRRVIYGAAEPKTGAAGSIVNLFADKRLNT 212

Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149
              I  GI ++  R ++  FF+ +R
Sbjct: 213 HSAIRGGILQEECRAVLSRFFQNKR 237


>gi|325295641|ref|YP_004282155.1| CMP/dCMP deaminase zinc-binding protein [Desulfurobacterium
           thermolithotrophum DSM 11699]
 gi|325066089|gb|ADY74096.1| CMP/dCMP deaminase zinc-binding protein [Desulfurobacterium
           thermolithotrophum DSM 11699]
          Length = 155

 Score =  207 bits (528), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 60/149 (40%), Positives = 88/149 (59%), Gaps = 1/149 (0%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M+  ++F+  AL+EA+ A    E+P+GA+ V + KIISRA NR   L+D TAHAE+LAI+
Sbjct: 1   MELDHLFLLEALKEAKKAFKLGEVPIGAIIVKDRKIISRAFNRKEFLQDPTAHAELLAIK 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              R L+   L    LY T+EPC MC   I  +RI RL Y   +PK GGIE+    +   
Sbjct: 61  EASRKLNSWRLNGCTLYSTVEPCIMCCGVIIQSRIDRLVYSVPDPKFGGIESLYTIFKDK 120

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  E+   I  + + +++++FFK  R
Sbjct: 121 KVNHRLEVKK-IYIKEAEELLKEFFKALR 148


>gi|297737907|emb|CBI27108.3| unnamed protein product [Vitis vinifera]
          Length = 1151

 Score =  207 bits (528), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 64/166 (38%), Positives = 80/166 (48%), Gaps = 18/166 (10%)

Query: 2    KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
            K   +FM  AL EA+ AA   E+PVGAV V + KII+R  NR  EL+D TAHAE++ IR 
Sbjct: 948  KIDEMFMREALLEAKKAANAWEVPVGAVLVQHGKIIARGCNRVEELRDSTAHAEMICIRE 1007

Query: 62   GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL-- 119
               +L    L E  LYVTLEPC MCA AI  ARI  L +GA N   G   +  + +    
Sbjct: 1008 ASNLLRTWRLSETTLYVTLEPCPMCAGAILQARIDTLVWGAPNKLLGADGSWIRLFPNGG 1067

Query: 120  ----------------ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
                               H    I  G+        +Q FF+ RR
Sbjct: 1068 EGGSGSELTDKTQAPAHPFHPKMTIRRGVLASECSDAMQQFFQLRR 1113


>gi|225423812|ref|XP_002277950.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 1358

 Score =  207 bits (528), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 64/166 (38%), Positives = 80/166 (48%), Gaps = 18/166 (10%)

Query: 2    KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
            K   +FM  AL EA+ AA   E+PVGAV V + KII+R  NR  EL+D TAHAE++ IR 
Sbjct: 1155 KIDEMFMREALLEAKKAANAWEVPVGAVLVQHGKIIARGCNRVEELRDSTAHAEMICIRE 1214

Query: 62   GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL-- 119
               +L    L E  LYVTLEPC MCA AI  ARI  L +GA N   G   +  + +    
Sbjct: 1215 ASNLLRTWRLSETTLYVTLEPCPMCAGAILQARIDTLVWGAPNKLLGADGSWIRLFPNGG 1274

Query: 120  ----------------ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
                               H    I  G+        +Q FF+ RR
Sbjct: 1275 EGGSGSELTDKTQAPAHPFHPKMTIRRGVLASECSDAMQQFFQLRR 1320


>gi|261401120|ref|ZP_05987245.1| tRNA-specific adenosine deaminase [Neisseria lactamica ATCC 23970]
 gi|269208892|gb|EEZ75347.1| tRNA-specific adenosine deaminase [Neisseria lactamica ATCC 23970]
          Length = 239

 Score =  207 bits (528), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 57/144 (39%), Positives = 81/144 (56%)

Query: 6   VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
            FM  ALE+A+ +AL  EIPVGAV V + KII+ A N      +V+ HAEI A+      
Sbjct: 94  HFMGLALEQAKLSALMGEIPVGAVIVSDGKIIASAHNTCIADCNVSRHAEINALAQAGSE 153

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           +    L   D+Y+TLEPC MCA+A+  ARIRR+ YGA+ PK G   +    +     +  
Sbjct: 154 MQNYRLDGCDIYITLEPCAMCASALIQARIRRVIYGAAEPKTGAAGSIVNLFADKRLNTH 213

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
             I  GI ++  R ++  FF+ +R
Sbjct: 214 TAIRGGILQEECRAVLSRFFQNKR 237


>gi|323465896|gb|ADX69583.1| Cytidine/deoxycytidylate deaminase, zinc-binding region
           [Lactobacillus helveticus H10]
 gi|328462872|gb|EGF34721.1| cytidine/deoxycytidylate deaminase, zinc-binding region
           [Lactobacillus helveticus MTCC 5463]
          Length = 168

 Score =  207 bits (528), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 52/148 (35%), Positives = 82/148 (55%), Gaps = 1/148 (0%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRM 61
               +M  A+++A+ A  + E+P+GAV V    K+I    NR    +D T HAE++AI+ 
Sbjct: 6   DKKKYMELAIDQAKEAEKQGEVPIGAVVVDPEGKVIGTGYNRRELDEDSTQHAEMIAIKE 65

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
            C  L    L +  L+VTLEPC MCA AI  +RI+ +Y+GA +PK G   +    + +  
Sbjct: 66  ACHNLGMWRLIDCSLFVTLEPCPMCAGAIINSRIKDVYFGALDPKAGACGSVVDLFEVEK 125

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H P    G+   +  Q+++DFF+  R
Sbjct: 126 FNHHPHSIRGLYRDQCAQMLKDFFRAIR 153


>gi|332522875|ref|ZP_08399127.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Streptococcus porcinus str. Jelinkova 176]
 gi|332314139|gb|EGJ27124.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Streptococcus porcinus str. Jelinkova 176]
          Length = 176

 Score =  207 bits (528), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 60/148 (40%), Positives = 79/148 (53%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
            +   FM  AL+EA+ + ++ EIP+G V V   KII R  N   EL     HAEI+AI  
Sbjct: 6   DEKEFFMREALKEAEKSLVKAEIPIGCVIVKEGKIIGRGHNAREELNQAIMHAEIMAINE 65

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
                    L E  L+VT+EPC MC+ AI LARI  + +GA N K GG  +  Q  T   
Sbjct: 66  ANVHEGNWRLLETSLFVTIEPCVMCSGAIGLARIPHVIFGAPNQKFGGAGSLYQILTDQR 125

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H  E+  G+ E    QI+QDFF + R
Sbjct: 126 LNHRVELESGLLEAECAQIMQDFFHQSR 153


>gi|219870714|ref|YP_002475089.1| tRNA-adenosine deaminase [Haemophilus parasuis SH0165]
 gi|219690918|gb|ACL32141.1| tRNA-adenosine deaminase, cytosine/adenosine deaminases
           [Haemophilus parasuis SH0165]
          Length = 157

 Score =  207 bits (528), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 62/143 (43%), Positives = 76/143 (53%), Gaps = 1/143 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  AL  A  A    EIPVGAV V     II    NR   L D TAHAEI AIRM  + +
Sbjct: 1   MQYALSLADKAEAEGEIPVGAVLVDKTGNIIGEGWNRAIILSDPTAHAEIQAIRMAGQQI 60

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  LYVTLEPCTMCA AI  +RI RL +GAS+ K G + +    +     +H  
Sbjct: 61  QNYRLLDTTLYVTLEPCTMCAGAILHSRIGRLVFGASDYKTGALGSRFHLFEDYKMNHFL 120

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           +I  G+      Q I  FF++RR
Sbjct: 121 QIRGGVMANECSQKISAFFRKRR 143


>gi|329117262|ref|ZP_08245979.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Streptococcus parauberis NCFD 2020]
 gi|326907667|gb|EGE54581.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Streptococcus parauberis NCFD 2020]
          Length = 169

 Score =  207 bits (528), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 56/149 (37%), Positives = 82/149 (55%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +++   FM  AL EA+ +  + EIP+G V V + +II R  N   EL     HAE++AI 
Sbjct: 5   LEEKENFMREALREAEKSLAKEEIPIGCVIVKDGQIIGRGHNAREELNQAIMHAEMMAIS 64

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
                     L E  ++VT+EPC MC+ AI LARI ++ YGA+N K GG ++  Q  T  
Sbjct: 65  QANAHEGNWRLLETTMFVTIEPCVMCSGAIGLARIPKVIYGAANQKFGGAQSLYQILTDE 124

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  E+  G+ E     I+Q FF++ R
Sbjct: 125 RLNHRVELETGVLEADCAAIMQSFFRQNR 153


>gi|153815558|ref|ZP_01968226.1| hypothetical protein RUMTOR_01794 [Ruminococcus torques ATCC 27756]
 gi|317502188|ref|ZP_07960362.1| tRNA-specific adenosine deaminase [Lachnospiraceae bacterium
           8_1_57FAA]
 gi|331088753|ref|ZP_08337663.1| hypothetical protein HMPREF1025_01246 [Lachnospiraceae bacterium
           3_1_46FAA]
 gi|145847200|gb|EDK24118.1| hypothetical protein RUMTOR_01794 [Ruminococcus torques ATCC 27756]
 gi|316896397|gb|EFV18494.1| tRNA-specific adenosine deaminase [Lachnospiraceae bacterium
           8_1_57FAA]
 gi|330407276|gb|EGG86779.1| hypothetical protein HMPREF1025_01246 [Lachnospiraceae bacterium
           3_1_46FAA]
          Length = 162

 Score =  207 bits (528), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 55/149 (36%), Positives = 78/149 (52%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +K    +M  A+++AQ A   NE P+G V V   KII R  NR    KD  AHAEI AI+
Sbjct: 7   LKLDEKYMRAAIKQAQKAYAINETPIGCVIVYEGKIIGRGYNRRNTDKDPLAHAEIKAIK 66

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              + +    L +  +YVTLEPC MCA AI  +R+ R+  G  NPK G   +      + 
Sbjct: 67  KASKKMGDWRLEQCTMYVTLEPCQMCAGAIIQSRLTRVVVGCMNPKAGCAGSVLNLLDIK 126

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  E+  G+ E+    ++  FF+E R
Sbjct: 127 QFNHQAELTTGVLEEECSALMTGFFRELR 155


>gi|123441377|ref|YP_001005364.1| tRNA-specific adenosine deaminase [Yersinia enterocolitica subsp.
           enterocolitica 8081]
 gi|122088338|emb|CAL11129.1| putative zinc-binding protein [Yersinia enterocolitica subsp.
           enterocolitica 8081]
          Length = 161

 Score =  207 bits (528), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 57/142 (40%), Positives = 78/142 (54%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  AL  A  A +  E+PVGA+ VL+N++I    NR     D TAHAEI+A+R G +++ 
Sbjct: 1   MQRALALALRAQVEGEVPVGAILVLDNQVIGEGWNRPIRDNDPTAHAEIMALRQGGQVVQ 60

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
              L +  LYVTLEPC MCA A+  +RIRRL YGA++ K G   +          +H  E
Sbjct: 61  NYRLIDATLYVTLEPCVMCAGAMVHSRIRRLVYGANDLKTGAAGSLVDILRHPGMNHQIE 120

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
           I  G+        +  FF+ RR
Sbjct: 121 ITAGVMADACAHQLSAFFRLRR 142


>gi|315605309|ref|ZP_07880353.1| tRNA(Ile)-lysidine synthase (tRNA(Ile)-lysidinesynthetase)
           [Actinomyces sp. oral taxon 180 str. F0310]
 gi|315312989|gb|EFU61062.1| tRNA(Ile)-lysidine synthase (tRNA(Ile)-lysidinesynthetase)
           [Actinomyces sp. oral taxon 180 str. F0310]
          Length = 451

 Score =  207 bits (528), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 53/143 (37%), Positives = 70/143 (48%), Gaps = 1/143 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  AL  A  A    ++PVGAV V    +II R  N      D T HAE++A+R     L
Sbjct: 1   MGKALFLANRARETGDVPVGAVVVDAGGRIIGRGWNCREGHHDPTGHAEVVALREAGCAL 60

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L    L VTLEPCTMCA AI  +R+ R+ +GA +PK G   +       A   H  
Sbjct: 61  GTWRLTGCTLVVTLEPCTMCAGAILASRVDRVVFGAWDPKAGAAGSLRDVLRDARMPHPT 120

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+  G+  Q +   ++ FF  RR
Sbjct: 121 EVIGGVLAQEAAMQLRSFFIGRR 143


>gi|23097481|ref|NP_690947.1| hypothetical protein OB0026 [Oceanobacillus iheyensis HTE831]
 gi|22775704|dbj|BAC11982.1| hypothetical conserved protein [Oceanobacillus iheyensis HTE831]
          Length = 166

 Score =  207 bits (528), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 53/148 (35%), Positives = 84/148 (56%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
            +  +FM+ A+ EA+ A + NE+P+GAV V + +I+ +  N    ++    HAE+LA++ 
Sbjct: 8   SQDELFMAAAIREARRAWILNEVPIGAVIVHDGEIVGKGFNLRESMQATLTHAELLAMQE 67

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
               +    L +  LYVTLEPC MCA AI  +R++R+ YGA +PK G             
Sbjct: 68  ANNEIGSWRLEDCTLYVTLEPCPMCAGAIVQSRMKRVVYGAPDPKAGCAGTIMNLLNEPR 127

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H  E+  G+ EQ+   I+++FFKE R
Sbjct: 128 FNHQVEVTSGVLEQQCSTILKEFFKELR 155


>gi|294674558|ref|YP_003575174.1| cytidine/deoxycytidylate deaminase zinc-binding domain-containing
           protein [Prevotella ruminicola 23]
 gi|294472670|gb|ADE82059.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein
           [Prevotella ruminicola 23]
          Length = 150

 Score =  207 bits (527), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 62/148 (41%), Positives = 83/148 (56%), Gaps = 5/148 (3%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           KK   +M  AL+EA  A    EIP+GAV V  ++++SRA N    L DVTAHAE+ AI  
Sbjct: 8   KKDERYMQMALDEAHLALEAGEIPIGAVVVCKDRVVSRAHNLTETLCDVTAHAEMQAITA 67

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
               L  + L E  LYVT+EPCTMCA AI  A+I R+ YGA + K G             
Sbjct: 68  AANTLGGKYLTECTLYVTVEPCTMCAGAIGWAQIPRIVYGAPDDKRG-----YHLLAPHA 122

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            H   ++  G+ E   R+++Q+FFK +R
Sbjct: 123 FHPKAQVTQGVLEDECRELMQNFFKAKR 150


>gi|242095760|ref|XP_002438370.1| hypothetical protein SORBIDRAFT_10g014230 [Sorghum bicolor]
 gi|241916593|gb|EER89737.1| hypothetical protein SORBIDRAFT_10g014230 [Sorghum bicolor]
          Length = 1607

 Score =  207 bits (527), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 63/167 (37%), Positives = 81/167 (48%), Gaps = 19/167 (11%)

Query: 2    KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
            K   +FM  AL EAQ AA   E+PVGAV V N +II+R  N   +L+D TAHAEI+ IR 
Sbjct: 1407 KVDELFMREALLEAQRAADIWEVPVGAVLVQNGEIIARGCNLVEDLRDSTAHAEIVCIRE 1466

Query: 62   GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFY---- 117
                L    L +  LYVTLEPC MCA AI  ARI  + +GA N   G   +  + +    
Sbjct: 1467 ASNKLKTWRLADTTLYVTLEPCAMCAGAILQARIDTVVWGAPNKLLGADGSWVRLFPGDG 1526

Query: 118  ---------------TLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
                            +   H    I  G+      +I+Q FF+ RR
Sbjct: 1527 QTNTLDSTNQSKAAGPVHPFHPKITIRRGVLSTECSEIMQQFFQLRR 1573


>gi|315653116|ref|ZP_07906041.1| tRNA-specific adenosine deaminase [Lactobacillus iners ATCC 55195]
 gi|315489481|gb|EFU79118.1| tRNA-specific adenosine deaminase [Lactobacillus iners ATCC 55195]
          Length = 158

 Score =  207 bits (527), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 57/149 (38%), Positives = 85/149 (57%), Gaps = 1/149 (0%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIR 60
           ++    M  A  EA  A  + EIP+GAV V     +I R  NR    +D T HAEI+AI+
Sbjct: 5   EEKEKIMKLAFLEADKAEKQGEIPIGAVIVDAEGNLIGRGYNRRELDEDATRHAEIIAIQ 64

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
             C+ L+   L +  L+VTLEPC MCA AI  AR++ +YYGA +PK G   +    +   
Sbjct: 65  EACKNLNSWRLIDCSLFVTLEPCPMCAGAIINARLKNVYYGAFDPKAGACGSVVDLFAFT 124

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H P+I+ G+  +++ Q +++FFK  R
Sbjct: 125 KFNHHPQIFGGLYREQAAQQLKNFFKNIR 153


>gi|270291185|ref|ZP_06197408.1| cytidine deaminase [Pediococcus acidilactici 7_4]
 gi|270280581|gb|EFA26416.1| cytidine deaminase [Pediococcus acidilactici 7_4]
          Length = 163

 Score =  207 bits (527), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 52/145 (35%), Positives = 81/145 (55%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
             +M  AL+EAQ A + +E+P+GAV V + KII R  N     +D T HAE+LAI   C 
Sbjct: 12  QFYMGEALKEAQFAKMIDEVPIGAVVVHDGKIIGRGHNLREHSQDATTHAEVLAITEACA 71

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
            L    L +  L+VT+EPC MC+  I  ++I  +Y+GA +PK G + +          +H
Sbjct: 72  YLRSWRLWDCQLFVTIEPCLMCSGTIINSQIPEVYFGARDPKAGAVRSLYTVLEDQRLNH 131

Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149
             E+  G++  ++  +++ FFK  R
Sbjct: 132 QVEVREGVAADQAAGLMKSFFKAIR 156


>gi|323701686|ref|ZP_08113358.1| CMP/dCMP deaminase zinc-binding protein [Desulfotomaculum
           nigrificans DSM 574]
 gi|323533459|gb|EGB23326.1| CMP/dCMP deaminase zinc-binding protein [Desulfotomaculum
           nigrificans DSM 574]
          Length = 144

 Score =  207 bits (527), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 62/142 (43%), Positives = 80/142 (56%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  AL EAQ AA + E+P+GAV V    I+ R  +    L D +AHAEILA+R   + L 
Sbjct: 1   MREALVEAQKAAEKGEVPIGAVVVAEGAIVGRGHDLRESLCDASAHAEILAMREAAKQLG 60

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
              L    LYVT+EPC MCA AI   R+RRL YGA NPK G +++          +H  E
Sbjct: 61  DWRLNHATLYVTVEPCAMCAGAIVQFRVRRLVYGAPNPKAGSVDSILDIVHQPRFNHRVE 120

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
           +  GI E   R +IQ+FF+  R
Sbjct: 121 VISGIMEDECRAVIQNFFRSLR 142


>gi|257876509|ref|ZP_05656162.1| cytidine/deoxycytidylate deaminase [Enterococcus casseliflavus
           EC20]
 gi|257810675|gb|EEV39495.1| cytidine/deoxycytidylate deaminase [Enterococcus casseliflavus
           EC20]
          Length = 168

 Score =  207 bits (527), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 56/144 (38%), Positives = 79/144 (54%)

Query: 6   VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
            FM  A++EA+ A    E+P+GAV VL+ KII R  N     +   AHAE+ AI   CR 
Sbjct: 14  FFMEEAIKEARKAEGLAEVPIGAVVVLDGKIIGRGHNLRETQQQAAAHAEMFAIEEACRT 73

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           +    L +  L+VTLEPC MC+ A+ LAR+  +Y+GA +PKGG              +H 
Sbjct: 74  VGSWRLEQAQLFVTLEPCPMCSGAMLLARVEEVYFGAYDPKGGTAGTLMNLLEDERFNHW 133

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
             +  GI E+   Q++ DFF+  R
Sbjct: 134 SYVEGGILEEACGQLLTDFFRALR 157


>gi|325144274|gb|EGC66579.1| tRNA-specific adenosine deaminase [Neisseria meningitidis
           M01-240013]
          Length = 239

 Score =  207 bits (527), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 55/148 (37%), Positives = 81/148 (54%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           ++   FM  AL +A+ +A   EIPVGAV V + KII+ A N      +V+ HAEI A+  
Sbjct: 90  EEMEHFMREALRQAEQSAADGEIPVGAVIVSDGKIIASAHNTCIADCNVSCHAEINALAQ 149

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
               +    L   D+Y+TLEPC MCA+A+  ARIRR+ YGA+ PK G   +    +    
Sbjct: 150 AGSEMQNYRLDGCDIYITLEPCAMCASALIQARIRRVIYGAAEPKTGAAGSIVNLFADKR 209

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +    I  GI ++  R ++  FF+ +R
Sbjct: 210 LNTHTAIRGGILQEECRAVLNRFFQNKR 237


>gi|254448832|ref|ZP_05062288.1| zinc-binding domain protein [gamma proteobacterium HTCC5015]
 gi|198261522|gb|EDY85811.1| zinc-binding domain protein [gamma proteobacterium HTCC5015]
          Length = 163

 Score =  207 bits (527), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 60/147 (40%), Positives = 83/147 (56%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
           +   +M  ALE+A+ AA   E+PVGAV V  +++I+ A NR     D TAHAEI  +R  
Sbjct: 8   RDECYMQLALEQAELAAQVGEVPVGAVLVQGDEVIASAFNRPIAEHDPTAHAEIQVLRQA 67

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
            +      L +  LYVTLEPC MC  AI  ARI RL Y A+ PK G +++          
Sbjct: 68  GQSQQNYRLCDTTLYVTLEPCVMCVGAILHARIGRLVYAAAEPKMGAVDSAFSLLRDERH 127

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
            H  ++  G+ E  SR++IQ FF++RR
Sbjct: 128 FHRMQVASGVLEAPSRELIQSFFRQRR 154


>gi|209527530|ref|ZP_03276032.1| CMP/dCMP deaminase zinc-binding [Arthrospira maxima CS-328]
 gi|209492018|gb|EDZ92371.1| CMP/dCMP deaminase zinc-binding [Arthrospira maxima CS-328]
          Length = 157

 Score =  207 bits (527), Expect = 6e-52,   Method: Composition-based stats.
 Identities = 59/149 (39%), Positives = 77/149 (51%), Gaps = 1/149 (0%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIR 60
              + +M  AL+    A    E+PVGAV V    K+I++  NR    +D TAHAEI+A+R
Sbjct: 6   TTHSHWMRQALKLGAAAGEAGEVPVGAVIVNQQGKLIAQGENRRERDRDPTAHAEIIALR 65

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              ++L    L    LYVTLEPC MCA AI  ARI  L YGA +PK G I          
Sbjct: 66  QASQVLGDWHLDTCTLYVTLEPCPMCAGAIIQARIGLLVYGADDPKTGSIRTVFNLPDSP 125

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H   +  GI E   RQ +Q +F + R
Sbjct: 126 ASYHRLPVLGGILESSCRQQLQSWFAQHR 154


>gi|293194557|ref|ZP_06610019.1| tRNA-specific adenosine deaminase [Actinomyces odontolyticus F0309]
 gi|292819677|gb|EFF78695.1| tRNA-specific adenosine deaminase [Actinomyces odontolyticus F0309]
          Length = 332

 Score =  207 bits (527), Expect = 6e-52,   Method: Composition-based stats.
 Identities = 54/143 (37%), Positives = 69/143 (48%), Gaps = 1/143 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  AL  A  A    ++PVGAV V  N +II R  N      D   HAEI+A+R   R  
Sbjct: 1   MGKALFLANRARETGDVPVGAVIVDENGRIIGRGWNCREANHDPAGHAEIVALREAGRAR 60

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L    L VTLEPCTMCA AI  +RI R+ +GA +PK G   +       A   H  
Sbjct: 61  GTWRLTGCTLIVTLEPCTMCAGAILASRIDRVVFGAWDPKAGAAGSLRDVLRDARMPHPT 120

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+  G+  Q +   ++ FF   R
Sbjct: 121 EVIGGVLAQEAAMQLRSFFLSCR 143


>gi|302325469|gb|ADL24670.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein
           [Fibrobacter succinogenes subsp. succinogenes S85]
          Length = 155

 Score =  207 bits (527), Expect = 6e-52,   Method: Composition-based stats.
 Identities = 53/142 (37%), Positives = 74/142 (52%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  AL +AQ A    EIP+G V V +  +I +  N+  +LKD TAHAEI+AI      L 
Sbjct: 1   MRMALRQAQIAFDMKEIPIGCVIVKDGVVIGKGYNQVEQLKDATAHAEIIAIGTAASTLD 60

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
              L    LYVTLEPC MCA AI  +R+ R+ YG+ + + GG        T      + E
Sbjct: 61  NWRLDGCTLYVTLEPCPMCAGAILNSRVSRIVYGSPDSRFGGCGTTIDVITGNALKRAVE 120

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
           +  GI       +++ FF++ R
Sbjct: 121 VTGGILADECLGLLKGFFQQMR 142


>gi|261364637|ref|ZP_05977520.1| tRNA-specific adenosine deaminase [Neisseria mucosa ATCC 25996]
 gi|288567233|gb|EFC88793.1| tRNA-specific adenosine deaminase [Neisseria mucosa ATCC 25996]
          Length = 243

 Score =  207 bits (527), Expect = 6e-52,   Method: Composition-based stats.
 Identities = 60/145 (41%), Positives = 82/145 (56%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
             FM  AL +A+ +A   EIPVGAV V +N+II+ A N      D++ HAEI A+ +   
Sbjct: 96  ETFMRAALVQAEQSARIGEIPVGAVVVADNQIIAAAHNTCVSDHDISRHAEIRALAVAGA 155

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
            L    L E DLY+TLEPC MCA+AI  AR+RR+ YGA+ PK G   +    +     + 
Sbjct: 156 ALQNYRLDECDLYITLEPCAMCASAIIQARVRRVIYGAAEPKTGAAGSVVNLFANPLLNK 215

Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149
              I  GI E   + ++Q FF+ RR
Sbjct: 216 HTAIKGGILEDECKDVLQAFFQTRR 240


>gi|51245291|ref|YP_065175.1| hypothetical protein DP1439 [Desulfotalea psychrophila LSv54]
 gi|50876328|emb|CAG36168.1| conserved hypothetical protein [Desulfotalea psychrophila LSv54]
          Length = 166

 Score =  207 bits (527), Expect = 6e-52,   Method: Composition-based stats.
 Identities = 55/147 (37%), Positives = 82/147 (55%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
           +  ++M  AL+EA  A    E+PVGAV V + ++I+   N      D +AHAEI+A+R  
Sbjct: 9   RDALWMGYALDEAARAGANGEVPVGAVLVQDGELIATGLNGMITHNDPSAHAEIVALRQA 68

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
            ++L+    PE  LYVTLEPC MC  AI  ARI+RL + A + K G   +          
Sbjct: 69  GQVLNNYRFPEATLYVTLEPCIMCMGAIIQARIKRLVFAAFDTKTGAAGSLYDIGRDGAL 128

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H  EI  G+  + S  +++ FF++RR
Sbjct: 129 NHRVEIMGGVLAETSAALLKAFFRDRR 155


>gi|332140490|ref|YP_004426228.1| cytidine/deoxycytidylate deaminase family protein [Alteromonas
           macleodii str. 'Deep ecotype']
 gi|327550512|gb|AEA97230.1| cytidine/deoxycytidylate deaminase family protein [Alteromonas
           macleodii str. 'Deep ecotype']
          Length = 223

 Score =  207 bits (527), Expect = 6e-52,   Method: Composition-based stats.
 Identities = 48/149 (32%), Positives = 76/149 (51%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +++   +M  AL  A +A    E+PVGA  VLN ++I    N      D +AHAE+ A++
Sbjct: 56  LEQHIRWMKHALALADSAESIGEVPVGACVVLNGELIGEGYNTPISDHDPSAHAELRAVK 115

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
                +    L +  LYVTLEPC+MCA  +  AR++R+ +GA + K G   +        
Sbjct: 116 QAASKVQNYRLIDATLYVTLEPCSMCAGMLVHARVKRVVFGAKDAKTGAAGSVMNLLQHP 175

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  +I  G+        + DFF++RR
Sbjct: 176 ALNHQVDIVSGVLASTCANKLSDFFRKRR 204


>gi|319638138|ref|ZP_07992901.1| cytidine and deoxycytidylate deaminase [Neisseria mucosa C102]
 gi|317400411|gb|EFV81069.1| cytidine and deoxycytidylate deaminase [Neisseria mucosa C102]
          Length = 240

 Score =  207 bits (527), Expect = 6e-52,   Method: Composition-based stats.
 Identities = 53/148 (35%), Positives = 79/148 (53%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
                FM  A+E+A+ +A   E+PVGAV V   K I+ A N      +V+ HAEI A+  
Sbjct: 90  NDMEAFMRLAIEQARQSAALGEVPVGAVIVYQGKAIAAAHNTCIGDHNVSHHAEINALAA 149

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
             + L    L + D+Y+TLEPC MCA+A+  AR+ R+ YGA+ PK G   +    +    
Sbjct: 150 AGKALQNYRLEDCDVYITLEPCAMCASALIQARVGRVIYGAAEPKTGAAGSVVDLFADKR 209

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +    I  GI  +  + ++QDFF  +R
Sbjct: 210 LNKHTAILGGILVEECQSVLQDFFAAKR 237


>gi|139473043|ref|YP_001127758.1| deaminase [Streptococcus pyogenes str. Manfredo]
 gi|134271289|emb|CAM29505.1| putative deaminase [Streptococcus pyogenes str. Manfredo]
          Length = 157

 Score =  207 bits (527), Expect = 6e-52,   Method: Composition-based stats.
 Identities = 55/149 (36%), Positives = 80/149 (53%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +++   FM  AL+EA+ +  + EIP+G V V + +II R  N   E      HAEI+AI 
Sbjct: 5   LEEQTYFMQEALKEAEKSLQKAEIPIGCVIVKDGEIIGRGHNAREESNQAIMHAEIMAIN 64

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
                     L +  L+VT+EPC MC+ AI LARI  + YGASN K GG ++  Q  T  
Sbjct: 65  EANAHEGNWRLLDTTLFVTIEPCVMCSGAIGLARIPHVIYGASNQKFGGADSLYQILTDE 124

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  ++  G+       I+Q FF++ R
Sbjct: 125 RLNHRVQVERGLLAADCANIMQTFFRQGR 153


>gi|168210507|ref|ZP_02636132.1| cytidine/deoxycytidylate deaminase family protein [Clostridium
           perfringens B str. ATCC 3626]
 gi|170711409|gb|EDT23591.1| cytidine/deoxycytidylate deaminase family protein [Clostridium
           perfringens B str. ATCC 3626]
          Length = 143

 Score =  207 bits (527), Expect = 6e-52,   Method: Composition-based stats.
 Identities = 58/142 (40%), Positives = 84/142 (59%), Gaps = 1/142 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           +S ALEEA+ A  + E+PVGAV V + +II+RA N    LKD TAHAEILAIR  C  L+
Sbjct: 2   LSLALEEAEKAREKGEVPVGAVIVKDGEIIARAHNLKETLKDPTAHAEILAIREACNKLN 61

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
              L   ++YVTLEPC MCA AI  +R+ ++Y G  +   G   +          ++  E
Sbjct: 62  NWRLNGCEMYVTLEPCPMCAGAILQSRLSKIYIGTFDDTTGAAGSVVNILQNHNLNYFLE 121

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
           +    ++++  +I+  FFK+RR
Sbjct: 122 VVWE-NDEKCSKILTKFFKDRR 142


>gi|167771010|ref|ZP_02443063.1| hypothetical protein ANACOL_02364 [Anaerotruncus colihominis DSM
           17241]
 gi|167666680|gb|EDS10810.1| hypothetical protein ANACOL_02364 [Anaerotruncus colihominis DSM
           17241]
          Length = 151

 Score =  207 bits (527), Expect = 6e-52,   Method: Composition-based stats.
 Identities = 65/147 (44%), Positives = 84/147 (57%), Gaps = 1/147 (0%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
             N FM  AL  A  AA R E+PVGAV V + +I+    NR    K+  AHAE+ AI   
Sbjct: 2   NDNDFMGEALRLAGCAAERGEVPVGAVVVCDGQIVGTGFNRRETGKNALAHAELEAIDAA 61

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
           CR L    L   +LYVTLEPC MCA AI  ARIRRL +GA +PK G   + + F  LA  
Sbjct: 62  CRRLGGWRLHRCELYVTLEPCPMCAGAIINARIRRLVFGARDPKSGCFGSVSDFNALA-F 120

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H P++  G+  +   QI+  FF++ R
Sbjct: 121 NHKPQVVCGVRGEECAQILSAFFQKLR 147


>gi|259501366|ref|ZP_05744268.1| tRNA-specific adenosine deaminase [Lactobacillus iners DSM 13335]
 gi|302190913|ref|ZP_07267167.1| hypothetical protein LineA_02730 [Lactobacillus iners AB-1]
 gi|309808233|ref|ZP_07702142.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Lactobacillus iners LactinV 01V1-a]
 gi|312872162|ref|ZP_07732235.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Lactobacillus iners LEAF 2062A-h1]
 gi|312873556|ref|ZP_07733603.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Lactobacillus iners LEAF 2052A-d]
 gi|312875738|ref|ZP_07735733.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Lactobacillus iners LEAF 2053A-b]
 gi|325912947|ref|ZP_08175321.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Lactobacillus iners UPII 60-B]
 gi|259167219|gb|EEW51714.1| tRNA-specific adenosine deaminase [Lactobacillus iners DSM 13335]
 gi|308168521|gb|EFO70630.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Lactobacillus iners LactinV 01V1-a]
 gi|311088730|gb|EFQ47179.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Lactobacillus iners LEAF 2053A-b]
 gi|311090809|gb|EFQ49206.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Lactobacillus iners LEAF 2052A-d]
 gi|311092246|gb|EFQ50617.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Lactobacillus iners LEAF 2062A-h1]
 gi|325477761|gb|EGC80899.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Lactobacillus iners UPII 60-B]
          Length = 158

 Score =  207 bits (527), Expect = 6e-52,   Method: Composition-based stats.
 Identities = 57/149 (38%), Positives = 85/149 (57%), Gaps = 1/149 (0%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIR 60
           ++    M  A  EA  A  + EIP+GAV V     +I R  NR    +D T HAEI+AI+
Sbjct: 5   EEKEKIMKLAFLEADKAEQQGEIPIGAVIVDAEGNLIGRGYNRRELDEDATRHAEIIAIQ 64

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
             C+ L+   L +  L+VTLEPC MCA AI  AR++ +YYGA +PK G   +    +   
Sbjct: 65  EACKNLNSWRLIDCSLFVTLEPCPMCAGAIINARLKNVYYGAFDPKAGACGSVVDLFAFT 124

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H P+I+ G+  +++ Q +++FFK  R
Sbjct: 125 KFNHHPQIFGGLYREQAAQQLKNFFKNIR 153


>gi|297587228|ref|ZP_06945873.1| tRNA-specific adenosine deaminase [Finegoldia magna ATCC 53516]
 gi|297575209|gb|EFH93928.1| tRNA-specific adenosine deaminase [Finegoldia magna ATCC 53516]
          Length = 155

 Score =  206 bits (526), Expect = 7e-52,   Method: Composition-based stats.
 Identities = 48/148 (32%), Positives = 77/148 (52%), Gaps = 1/148 (0%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
                FM  A+E+A+ A   +E+PVG V V + +II++A N   + K+ T HAE+ AI  
Sbjct: 3   NNDEKFMMKAIEQAKIAYDMDEVPVGCVIVKDGEIIAQAYNSVEKDKNATMHAELKAINQ 62

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
               +    L +  +YVTLEPC MC  A+  +RI ++ +GA + K G   +         
Sbjct: 63  ATEFIGNFRLDDCIMYVTLEPCVMCTGALVYSRIPKVVFGAFDKKRGACGSLISLNDYEG 122

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H  E+   I E+   +++Q FF+  R
Sbjct: 123 LNHKIEVKS-IMEKECVELMQSFFRRIR 149


>gi|254882842|ref|ZP_05255552.1| cytosine deaminase [Bacteroides sp. 4_3_47FAA]
 gi|319643397|ref|ZP_07998023.1| cytosine/adenosine deaminase [Bacteroides sp. 3_1_40A]
 gi|254835635|gb|EET15944.1| cytosine deaminase [Bacteroides sp. 4_3_47FAA]
 gi|317385026|gb|EFV65979.1| cytosine/adenosine deaminase [Bacteroides sp. 3_1_40A]
          Length = 144

 Score =  206 bits (526), Expect = 7e-52,   Method: Composition-based stats.
 Identities = 61/149 (40%), Positives = 81/149 (54%), Gaps = 5/149 (3%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M     +M  AL EA  AA + E+PVGAV V  ++II R  N    L DVTAHAE+ AI 
Sbjct: 1   MADDTYYMKQALMEAVKAAEQGEVPVGAVVVCRDRIIGRGHNLTETLNDVTAHAEMQAIT 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
                L  + L E  LYVT+EPC MCA AI+ A+  +L +GA +PK G      Q Y   
Sbjct: 61  AAANTLGGKYLNECTLYVTVEPCVMCAGAIAWAQTGKLVFGAEDPKRG-----YQKYAPD 115

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             H    +  GI      ++++DFFK++R
Sbjct: 116 ALHPKTIVVKGILADECVRLMKDFFKKKR 144


>gi|229588606|ref|YP_002870725.1| putative deaminase [Pseudomonas fluorescens SBW25]
 gi|229360472|emb|CAY47329.1| putative deaminase [Pseudomonas fluorescens SBW25]
          Length = 166

 Score =  206 bits (526), Expect = 8e-52,   Method: Composition-based stats.
 Identities = 58/148 (39%), Positives = 80/148 (54%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
            +   FM  AL  A   A   E+PVGAV V + +II R  N      D +AHAE++AIR 
Sbjct: 14  SRDQDFMREALVLAAQGAALGEVPVGAVLVQDGEIIGRGFNCPISGNDPSAHAEMVAIRA 73

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
             + +S   L    LYVTLEPC+MCA  I  +RI R+ YGA  PK G +++  QF+T   
Sbjct: 74  AAQAISNYRLVGSTLYVTLEPCSMCAGLIVHSRIARVVYGALEPKAGIVQSQGQFFTQGF 133

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H      G+  Q    ++ +FF+ RR
Sbjct: 134 LNHRVVFEGGVLAQECGTVLSEFFRARR 161


>gi|258510122|ref|YP_003183556.1| CMP/dCMP deaminase zinc-binding [Alicyclobacillus acidocaldarius
           subsp. acidocaldarius DSM 446]
 gi|257476848|gb|ACV57167.1| CMP/dCMP deaminase zinc-binding [Alicyclobacillus acidocaldarius
           subsp. acidocaldarius DSM 446]
          Length = 161

 Score =  206 bits (526), Expect = 8e-52,   Method: Composition-based stats.
 Identities = 60/145 (41%), Positives = 83/145 (57%), Gaps = 2/145 (1%)

Query: 1   MKK--GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           M++     FM  ALE A+ AA   E+PVGAV V N +I+    NR    +D TAHAE+LA
Sbjct: 2   MEQAADERFMRRALELAEEAARWGEVPVGAVVVENGRIVGEGFNRRETWRDGTAHAEMLA 61

Query: 59  IRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
           I    R L    L    LYVTLEPC MCA AI L+R++R+ YGA++ KGG + +  +   
Sbjct: 62  IEEASRRLGGWRLTNCVLYVTLEPCPMCAGAIVLSRVQRVVYGATDAKGGAVASKVRLLE 121

Query: 119 LATCHHSPEIYPGISEQRSRQIIQD 143
               +H+P+I  GI      +++ D
Sbjct: 122 PGLWNHAPQITSGILADDCAKLLTD 146


>gi|18309013|ref|NP_560947.1| cytidine/deoxycytidylate deaminase family protein [Clostridium
           perfringens str. 13]
 gi|18143688|dbj|BAB79737.1| conserved hypothetical protein [Clostridium perfringens str. 13]
          Length = 143

 Score =  206 bits (526), Expect = 8e-52,   Method: Composition-based stats.
 Identities = 58/142 (40%), Positives = 84/142 (59%), Gaps = 1/142 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           +S ALEEA+ A  + E+PVGAV V + +II+RA N    LKD TAHAEILAIR  C  L+
Sbjct: 2   LSLALEEAEKAREKGEVPVGAVIVKDGEIIARAHNLKETLKDPTAHAEILAIREACNKLN 61

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
              L   ++YVTLEPC MCA AI  +R+ ++Y G  +   G   +          ++  E
Sbjct: 62  NWRLHGCEMYVTLEPCPMCAGAILQSRLSKIYIGTFDDTTGAAGSVVNILQNHNLNYFLE 121

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
           +    ++++  +I+  FFK+RR
Sbjct: 122 VVWQ-NDEKCSKILTKFFKDRR 142


>gi|309805439|ref|ZP_07699486.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Lactobacillus iners LactinV 09V1-c]
 gi|309810071|ref|ZP_07703917.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Lactobacillus iners SPIN 2503V10-D]
 gi|308165257|gb|EFO67493.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Lactobacillus iners LactinV 09V1-c]
 gi|308169570|gb|EFO71617.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Lactobacillus iners SPIN 2503V10-D]
          Length = 158

 Score =  206 bits (526), Expect = 8e-52,   Method: Composition-based stats.
 Identities = 57/149 (38%), Positives = 84/149 (56%), Gaps = 1/149 (0%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIR 60
           ++    M  A  EA  A  + EIP+GAV V     +I R  NR    +D T HAEI+AI+
Sbjct: 5   EEKEKIMKLAFLEADKAEQQGEIPIGAVIVDAEGNLIGRGYNRRELDEDATRHAEIIAIQ 64

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
             C+ L+   L +  L+VTLEPC MCA AI  AR++ +YYGA +PK G   +    +   
Sbjct: 65  EACKNLNSWRLIDCSLFVTLEPCPMCAGAIINARLKNVYYGAFDPKAGACGSVVDLFAFT 124

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H P+I+ G+  +++ Q ++ FFK  R
Sbjct: 125 KFNHHPQIFGGLYREQAAQQLKKFFKNIR 153


>gi|253682749|ref|ZP_04863545.1| tRNA-specific adenosine deaminase [Clostridium botulinum D str.
           1873]
 gi|253561071|gb|EES90524.1| tRNA-specific adenosine deaminase [Clostridium botulinum D str.
           1873]
          Length = 147

 Score =  206 bits (526), Expect = 8e-52,   Method: Composition-based stats.
 Identities = 58/149 (38%), Positives = 84/149 (56%), Gaps = 3/149 (2%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           MK    FM  AL+EA+ A   +E+PVGA+ V   K+I+ A N   +LKD TAHAEILAI+
Sbjct: 1   MK--EEFMKLALKEAKIAKNMDEVPVGAIIVKEGKVIASAHNLREKLKDPTAHAEILAIK 58

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
             C IL    L + ++YVTLEPC MC  AI  +RI+++Y G  +P  G   +        
Sbjct: 59  KACEILGDWRLSDCEMYVTLEPCPMCTGAIIQSRIKKIYIGTFDPVAGCCGSVVDLVQNR 118

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +   ++   +  +   +I+ +FFK RR
Sbjct: 119 YLNTMIDVIW-LYHKECSEILTNFFKNRR 146


>gi|269129124|ref|YP_003302494.1| CMP/dCMP deaminase zinc-binding protein [Thermomonospora curvata
           DSM 43183]
 gi|268314082|gb|ACZ00457.1| CMP/dCMP deaminase zinc-binding protein [Thermomonospora curvata
           DSM 43183]
          Length = 168

 Score =  206 bits (526), Expect = 8e-52,   Method: Composition-based stats.
 Identities = 51/143 (35%), Positives = 75/143 (52%), Gaps = 1/143 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  AL++A+ A    ++PVGAV +    ++I+   N   +  D TAHAE++A+R     L
Sbjct: 24  MRLALDQARLAMESGDVPVGAVILDSGGRVIATGRNEREQTADPTAHAEVVALRSAAARL 83

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L    L VTLEPCTMCA A  LAR+ R+ YGA +PK G + +          +H P
Sbjct: 84  GSWRLEGCTLVVTLEPCTMCAGAAVLARVDRIVYGAVDPKAGAVGSLWDVVRDRRLNHRP 143

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+   +       ++ +FF  RR
Sbjct: 144 EVIAEVLADECGAVLTEFFARRR 166


>gi|300024099|ref|YP_003756710.1| CMP/dCMP deaminase zinc-binding protein [Hyphomicrobium
           denitrificans ATCC 51888]
 gi|299525920|gb|ADJ24389.1| CMP/dCMP deaminase zinc-binding protein [Hyphomicrobium
           denitrificans ATCC 51888]
          Length = 145

 Score =  206 bits (525), Expect = 8e-52,   Method: Composition-based stats.
 Identities = 84/143 (58%), Positives = 106/143 (74%), Gaps = 1/143 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           MS AL+EA+ AA R E+PVGAV V  +  ++  AGNR REL D TAHAEILAIR  C +L
Sbjct: 1   MSLALDEARAAAERGEVPVGAVIVSASGDVLVLAGNRTRELNDPTAHAEILAIRAACSVL 60

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
             E L + DLYVTLEPC MCAAAIS ARIRRLYYGA +PK GG+E+G + ++  TCHH+P
Sbjct: 61  ETERLVDCDLYVTLEPCPMCAAAISFARIRRLYYGAGDPKSGGVEHGPRIFSQQTCHHAP 120

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+YPG++E  S  +++ FF  +R
Sbjct: 121 EVYPGLAEPESAALLKSFFAAKR 143


>gi|300770195|ref|ZP_07080074.1| tRNA-specific adenosine deaminase [Sphingobacterium spiritivorum
           ATCC 33861]
 gi|300762671|gb|EFK59488.1| tRNA-specific adenosine deaminase [Sphingobacterium spiritivorum
           ATCC 33861]
          Length = 154

 Score =  206 bits (525), Expect = 8e-52,   Method: Composition-based stats.
 Identities = 52/149 (34%), Positives = 75/149 (50%), Gaps = 6/149 (4%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +     +M  AL  A+ A   +E+P+GAV V   KII +  N    L DVTAHAE+ A  
Sbjct: 12  IDPDEFYMKAALTLAKKAYEEDEVPIGAVIVSQGKIIGKGYNLTERLNDVTAHAEMQAFT 71

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
                L  + L +  LYVT+EPC MCA A    ++ R+ YGA + K G    G       
Sbjct: 72  AASSYLGGKYLKDCTLYVTVEPCVMCAGASYWTQVSRIVYGAPDEKRGASRYG------K 125

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             H   EI  G+ ++   ++I  FF+++R
Sbjct: 126 LFHPKTEIISGVLQEECAELITSFFRQKR 154


>gi|168217743|ref|ZP_02643368.1| cytidine/deoxycytidylate deaminase family protein [Clostridium
           perfringens NCTC 8239]
 gi|182380212|gb|EDT77691.1| cytidine/deoxycytidylate deaminase family protein [Clostridium
           perfringens NCTC 8239]
          Length = 143

 Score =  206 bits (525), Expect = 8e-52,   Method: Composition-based stats.
 Identities = 59/142 (41%), Positives = 84/142 (59%), Gaps = 1/142 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           +S ALEEA+ A  + E+PVGAV V N +II+RA N    LKD TAHAEILAIR  C  L+
Sbjct: 2   LSLALEEAEKAREKGEVPVGAVIVKNGEIIARAHNLKETLKDPTAHAEILAIREACNKLN 61

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
              L   ++YVTLEPC MCA AI  +R+ ++Y G  +   G   +          ++  E
Sbjct: 62  NWRLNGCEMYVTLEPCPMCAGAILQSRLSKIYIGTFDDTTGAAGSVVNILQNHNLNYFLE 121

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
           +    ++++  +I+  FFK+RR
Sbjct: 122 VVWE-NDEKCSKILTKFFKDRR 142


>gi|153877830|ref|ZP_02004382.1| cytosine/adenosine deaminase [Beggiatoa sp. PS]
 gi|152065706|gb|EDN65618.1| cytosine/adenosine deaminase [Beggiatoa sp. PS]
          Length = 156

 Score =  206 bits (525), Expect = 9e-52,   Method: Composition-based stats.
 Identities = 51/148 (34%), Positives = 75/148 (50%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +     +M  AL  A+ AA + EIPVGAV +     I+   N++    D TAHAEI+A+R
Sbjct: 6   LNNDKKWMRHALHLAERAAKQGEIPVGAVIIHGESCIAEGWNQSILAHDPTAHAEIVALR 65

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
                L    L +  LYVTLEPC MCA AI  AR++R+ +GA + K G   +        
Sbjct: 66  KAAHYLKNYRLIDTTLYVTLEPCVMCAGAILQARVKRVVFGAYDEKAGAAGSRFDILRDT 125

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKER 148
             +H  E    +  +     + DFF+++
Sbjct: 126 RHNHQVECVSQVLAEECGACLTDFFRQK 153


>gi|218929978|ref|YP_002347853.1| tRNA-specific adenosine deaminase [Yersinia pestis CO92]
 gi|115348589|emb|CAL21531.1| putative zinc-binding protein [Yersinia pestis CO92]
          Length = 159

 Score =  206 bits (525), Expect = 9e-52,   Method: Composition-based stats.
 Identities = 59/142 (41%), Positives = 76/142 (53%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  AL  A  A    E+PVGAV VL NK+I    NR     D TAHAEI+A+R G + + 
Sbjct: 1   MRHALTLALRAQEEGEVPVGAVLVLGNKVIGEGWNRPIRDNDPTAHAEIMALRQGGQAVQ 60

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
              L +  LYVTLEPC MCA A+  +RIRRL YGA++ K G   +          +H  E
Sbjct: 61  NYRLLDATLYVTLEPCVMCAGAMVHSRIRRLVYGANDVKTGAAGSLVDILRHPGMNHQIE 120

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
           +  GI        +  FF++RR
Sbjct: 121 VSAGILAIACSHQLSAFFRQRR 142


>gi|325566945|ref|ZP_08143723.1| tRNA-specific adenosine deaminase [Enterococcus casseliflavus ATCC
           12755]
 gi|325159117|gb|EGC71262.1| tRNA-specific adenosine deaminase [Enterococcus casseliflavus ATCC
           12755]
          Length = 168

 Score =  206 bits (525), Expect = 9e-52,   Method: Composition-based stats.
 Identities = 56/144 (38%), Positives = 79/144 (54%)

Query: 6   VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
            FM  A++EA+ A    E+P+GAV VL+ KII R  N     +   AHAE+ AI   CR 
Sbjct: 14  FFMEEAIKEARKAEGVAEVPIGAVVVLDGKIIGRGHNLRETQQQAAAHAEMFAIEEACRT 73

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           +    L +  L+VTLEPC MC+ A+ LAR+  +Y+GA +PKGG              +H 
Sbjct: 74  VGSWRLEQAQLFVTLEPCPMCSGAMLLARVEEVYFGAYDPKGGTAGTLMNLLEDERFNHW 133

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
             +  GI E+   Q++ DFF+  R
Sbjct: 134 SYVEGGILEEACGQLLTDFFRALR 157


>gi|153006601|ref|YP_001380926.1| CMP/dCMP deaminase [Anaeromyxobacter sp. Fw109-5]
 gi|152030174|gb|ABS27942.1| CMP/dCMP deaminase zinc-binding [Anaeromyxobacter sp. Fw109-5]
          Length = 150

 Score =  206 bits (525), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 60/142 (42%), Positives = 82/142 (57%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  AL  A+ AA R E+PVGAVAV   +++ R  N      D TAHAE+LAI+   R L 
Sbjct: 1   MQEALALARGAAERGEVPVGAVAVFEGRVVGRGANAREAAHDPTAHAELLAIQDAARALG 60

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
           +  L  V +YVTLEPC MCA A+ LARI RL Y AS+PK G + +     T    +H   
Sbjct: 61  RWRLTGVTVYVTLEPCAMCAGAMVLARIDRLVYAASDPKAGAVGSLVDLSTDPRLNHRFP 120

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
           +  G+  + +  +++ FF+ RR
Sbjct: 121 VDKGLLAEEAGDLLRAFFRARR 142


>gi|15964553|ref|NP_384906.1| putative deaminase protein [Sinorhizobium meliloti 1021]
 gi|307314743|ref|ZP_07594339.1| CMP/dCMP deaminase zinc-binding [Sinorhizobium meliloti BL225C]
 gi|307320037|ref|ZP_07599458.1| CMP/dCMP deaminase zinc-binding [Sinorhizobium meliloti AK83]
 gi|15073731|emb|CAC45372.1| Putative tRNA-specific adenosine deaminase [Sinorhizobium meliloti
           1021]
 gi|306894252|gb|EFN25017.1| CMP/dCMP deaminase zinc-binding [Sinorhizobium meliloti AK83]
 gi|306898967|gb|EFN29613.1| CMP/dCMP deaminase zinc-binding [Sinorhizobium meliloti BL225C]
          Length = 149

 Score =  206 bits (525), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 86/149 (57%), Positives = 109/149 (73%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M +   FM  AL+EA+ AA R E+P+GAV VL+ K+I+ AGNR REL D+TAHAEI AIR
Sbjct: 1   MAETARFMQAALQEARKAAARGEVPIGAVVVLDGKMIAAAGNRTRELNDITAHAEIEAIR 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
                +  E L   DLYVTLEPCTMCAAAIS ARIRRLYYGA +PKGG ++NG +FY   
Sbjct: 61  HAAAAVGDERLSGADLYVTLEPCTMCAAAISFARIRRLYYGAEDPKGGAVDNGVRFYASP 120

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
           TCHH P++Y G++E+ +  I+++FF  RR
Sbjct: 121 TCHHVPDVYSGLAEREAADILREFFAGRR 149


>gi|329897048|ref|ZP_08271820.1| tRNA-specific adenosine-34 deaminase [gamma proteobacterium
           IMCC3088]
 gi|328921488|gb|EGG28874.1| tRNA-specific adenosine-34 deaminase [gamma proteobacterium
           IMCC3088]
          Length = 159

 Score =  206 bits (525), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 52/149 (34%), Positives = 80/149 (53%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M +   +M  AL +A+ A    E+PVG V V +  +I+   N      D +AHAEI+A+R
Sbjct: 1   MNEDEYWMRQALLQAEQAYACGEVPVGCVIVRDGSLIASGHNVVISSADPSAHAEIVALR 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
                +    L +  LYVTLEPC MC  A+  AR++RL + A+ PK G + +  +     
Sbjct: 61  HAGSRIGNYRLVDASLYVTLEPCLMCVGAMVHARVQRLIFAATEPKAGAVCSRCEALNFD 120

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  +   G+  Q+S +++  FFKERR
Sbjct: 121 HLNHRVQWQGGVMGQQSSELLSRFFKERR 149


>gi|282858963|ref|ZP_06268101.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Prevotella bivia JCVIHMP010]
 gi|282588243|gb|EFB93410.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Prevotella bivia JCVIHMP010]
          Length = 150

 Score =  206 bits (525), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 59/148 (39%), Positives = 83/148 (56%), Gaps = 5/148 (3%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           KK   +M  AL+EA+ A    EIP+GA+ V  NKII+RA N    L DVTAHAE+ AI +
Sbjct: 8   KKDIYYMQRALDEAKQAYKEGEIPIGAIVVCKNKIIARAHNLTETLHDVTAHAEMQAITI 67

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
               L  + L +  LYVT+EPC MCA A+  ++I+R+ +G  + K G        Y    
Sbjct: 68  AANELGGKYLEDCTLYVTVEPCIMCAGALGWSQIKRVVFGCLDEKRG-----YHEYAPKA 122

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            H    +  G+ +   + ++Q FFKERR
Sbjct: 123 LHPKANVIGGVLDSECKALMQRFFKERR 150


>gi|262278921|ref|ZP_06056706.1| conserved hypothetical protein [Acinetobacter calcoaceticus
           RUH2202]
 gi|262259272|gb|EEY78005.1| conserved hypothetical protein [Acinetobacter calcoaceticus
           RUH2202]
          Length = 167

 Score =  206 bits (525), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 60/148 (40%), Positives = 80/148 (54%), Gaps = 1/148 (0%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
               +M  A E+A+ AA + EIPVGAV V  N++I    N    L D TAHAEI AIR  
Sbjct: 5   SDEYWMQLAYEQAELAAQQGEIPVGAVVVSQNRVIGSGYNAPISLLDPTAHAEIQAIRAA 64

Query: 63  CRILSQEILP-EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
           C  L    LP +  LYVTLEPCTMC  A+  ARI+ + +G + PK G + +  Q      
Sbjct: 65  CLSLENYRLPEDATLYVTLEPCTMCVGALVHARIKHVVFGTTEPKAGSLVSTRQLLQHGY 124

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H      G  +++  Q +  FFK+RR
Sbjct: 125 YNHRFTFEHGCLQEKCAQQLSHFFKQRR 152


>gi|307293957|ref|ZP_07573801.1| CMP/dCMP deaminase zinc-binding [Sphingobium chlorophenolicum L-1]
 gi|306880108|gb|EFN11325.1| CMP/dCMP deaminase zinc-binding [Sphingobium chlorophenolicum L-1]
          Length = 152

 Score =  206 bits (525), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 71/142 (50%), Positives = 93/142 (65%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  AL+ A++AA   E+P+GAV  L+ +I+    NRNR   D TAHAEI+AIR     L 
Sbjct: 11  MRRALDLARSAAEAGEVPIGAVVTLDGRIVGEGENRNRRDNDPTAHAEIVAIRAAAAHLG 70

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
              L   DL+VTLEPC MCA AIS ARI RLYY A++PKGG IE G +F+T   C H PE
Sbjct: 71  DFRLNGCDLWVTLEPCAMCAGAISHARIARLYYAAADPKGGAIEQGPRFFTQPQCLHRPE 130

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
           +Y G+++  +  +++DFF  RR
Sbjct: 131 VYGGLAQAEASMLLRDFFVARR 152


>gi|110597776|ref|ZP_01386060.1| CMP/dCMP deaminase, zinc-binding [Chlorobium ferrooxidans DSM
           13031]
 gi|110340683|gb|EAT59163.1| CMP/dCMP deaminase, zinc-binding [Chlorobium ferrooxidans DSM
           13031]
          Length = 153

 Score =  206 bits (525), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 58/150 (38%), Positives = 80/150 (53%), Gaps = 1/150 (0%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAI 59
           M      M  A  EA  A  + E+PVGAV V  N  +I R  N+   L D TAHAE++A+
Sbjct: 1   MLDFTWCMELAFREAIKAFEKKEVPVGAVIVDSNGHVIGRGYNQVESLCDATAHAEMIAL 60

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
                 +  + L +  L VT+EPC MCA AI  A++ R+ +GA +PK G           
Sbjct: 61  TSAMATIGNKYLEDCTLAVTMEPCPMCAGAIVNAKVGRVVFGAYDPKMGASGTVMNITGC 120

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
              +H PE+Y GI E + R ++QDFF+E R
Sbjct: 121 QQLNHQPEVYGGIMENKCRTLLQDFFRELR 150


>gi|313896633|ref|ZP_07830182.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Selenomonas sp. oral taxon 137 str. F0430]
 gi|320529093|ref|ZP_08030185.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Selenomonas artemidis F0399]
 gi|312974818|gb|EFR40284.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Selenomonas sp. oral taxon 137 str. F0430]
 gi|320138723|gb|EFW30613.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Selenomonas artemidis F0399]
          Length = 156

 Score =  205 bits (524), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 60/150 (40%), Positives = 81/150 (54%), Gaps = 1/150 (0%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAI 59
           M      M  AL EA+ A    E+P+GAV +     I+S   N      D TAHAE++AI
Sbjct: 1   MPDDVKGMRLALAEAERAYALGEVPIGAVVMDGAGNIVSTGHNLRESEHDATAHAELIAI 60

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
           R  CR L +  L  + LYVT+EPC MCA AI ++RI R+ YGA++ K G  E+       
Sbjct: 61  RRACRALGRWRLTGMTLYVTIEPCPMCAGAIVMSRISRVVYGAADSKAGACESLFNIPGC 120

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
            T +H PE+Y  +       I++ FF ERR
Sbjct: 121 MTLNHRPEVYGQVMADECHAIMRRFFNERR 150


>gi|182416390|ref|YP_001821456.1| CMP/dCMP deaminase zinc-binding [Opitutus terrae PB90-1]
 gi|177843604|gb|ACB77856.1| CMP/dCMP deaminase zinc-binding [Opitutus terrae PB90-1]
          Length = 178

 Score =  205 bits (524), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 1/149 (0%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           +    +MS A  +A +A   +E+P+GAV  L  ++++ A N   E +D TAHAE+LAI  
Sbjct: 19  RDDTFYMSLAFNQAIDAWRLDEVPIGAVIELGGEVVAAAHNTVEEARDPTAHAEMLAITQ 78

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
               L    L    +YVT EPC MC+ A+ ++R++R+ Y   +PK G +   T    L  
Sbjct: 79  AAAKLGDWRLEGATVYVTKEPCPMCSGAMLMSRVKRVCYAVRDPKMGCLGGATNLNDLPR 138

Query: 122 CHHSPEIY-PGISEQRSRQIIQDFFKERR 149
            +H  E+   G+ E   R ++Q FFK +R
Sbjct: 139 VNHHVELTAGGVLEDECRALLQAFFKLKR 167


>gi|255534275|ref|YP_003094646.1| tRNA-specific adenosine-34 deaminase [Flavobacteriaceae bacterium
           3519-10]
 gi|255340471|gb|ACU06584.1| tRNA-specific adenosine-34 deaminase [Flavobacteriaceae bacterium
           3519-10]
          Length = 143

 Score =  205 bits (524), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 58/149 (38%), Positives = 82/149 (55%), Gaps = 6/149 (4%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M     +M  AL+EAQ A  ++E+P+G + V NN+II++A N    L DVTAHAE+ AI 
Sbjct: 1   MFTDEYYMKIALQEAQQALEKDEVPIGCIIVSNNRIIAKAHNLTEALNDVTAHAEMQAIT 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
                L  + L    LYVTLEPC MC  A+S ++I ++  GA + + G I          
Sbjct: 61  SAANYLGGKYLQNCTLYVTLEPCVMCCGALSWSQISKVVIGARDEQRGFINKNLSI---- 116

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             H   EI  G+ E    Q+++DFFK +R
Sbjct: 117 --HPKTEIVLGVLENECSQLVKDFFKSKR 143


>gi|154247024|ref|YP_001417982.1| CMP/dCMP deaminase zinc-binding [Xanthobacter autotrophicus Py2]
 gi|154161109|gb|ABS68325.1| CMP/dCMP deaminase zinc-binding [Xanthobacter autotrophicus Py2]
          Length = 147

 Score =  205 bits (524), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 82/143 (57%), Positives = 108/143 (75%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  AL EA+ AA R E+PVGAV V   ++I+R GNR REL D TAHAE+L +R     L
Sbjct: 5   YMQMALNEARAAAERGEVPVGAVLVRGAEVIARDGNRTRELNDPTAHAEVLVLRTAGARL 64

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
             E L   DLYVTLEPC MCAAA+S ARIRRLYYGAS+PKGGG+E+G +F++  TCHH P
Sbjct: 65  KSERLVNCDLYVTLEPCAMCAAALSFARIRRLYYGASDPKGGGVEHGPRFFSQPTCHHMP 124

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+Y GI+E+++ ++++ FF++RR
Sbjct: 125 EVYGGIAERQAAEVLRSFFQDRR 147


>gi|303237080|ref|ZP_07323650.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Prevotella disiens FB035-09AN]
 gi|302482467|gb|EFL45492.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Prevotella disiens FB035-09AN]
          Length = 150

 Score =  205 bits (524), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 62/149 (41%), Positives = 84/149 (56%), Gaps = 5/149 (3%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +KK   +M  AL  A+ A  + E+PVGAV V  N IISRA N    L DVTAHAE+ AI 
Sbjct: 7   IKKDEYYMGRALAMAEEAFEKGEVPVGAVIVCRNHIISRAHNLTEALTDVTAHAEMQAIT 66

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
           M    L  + L +  LYVT+EPC MCA A+  ++I+R+ YG S+ K G        +   
Sbjct: 67  MSANELGGKYLQDCTLYVTVEPCIMCAGALGWSQIKRIVYGCSDDKRG-----FSLHAPK 121

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             H    +  G+ E+  + ++Q FFKERR
Sbjct: 122 ALHPKTVVTKGVREEECKALMQRFFKERR 150


>gi|298368702|ref|ZP_06980020.1| tRNA-specific adenosine deaminase [Neisseria sp. oral taxon 014
           str. F0314]
 gi|298282705|gb|EFI24192.1| tRNA-specific adenosine deaminase [Neisseria sp. oral taxon 014
           str. F0314]
          Length = 241

 Score =  205 bits (524), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 55/145 (37%), Positives = 81/145 (55%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
            +FM  ALE+A  +A   EIPVGA  V N  +I+ A N   + +DV+ HAEI A+     
Sbjct: 93  EIFMRIALEQAVQSAAAGEIPVGAAVVKNGSVIAAAHNTCIQSRDVSRHAEISALAQAGA 152

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
           +L    L   D+YVTLEPC MCA+A+  AR+ R+ +GA  PK G   +    +     + 
Sbjct: 153 VLGNYRLDGCDVYVTLEPCAMCASALIQARVARVIFGADEPKTGAAGSIIDLFAAHGINK 212

Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149
              +  GI ++  R ++Q FF+E+R
Sbjct: 213 HTAVTGGILKKECRTLLQQFFREKR 237


>gi|163867550|ref|YP_001608749.1| cytosine/adenosine deaminase [Bartonella tribocorum CIP 105476]
 gi|161017196|emb|CAK00754.1| Cytosine/adenosine deaminase [Bartonella tribocorum CIP 105476]
          Length = 148

 Score =  205 bits (524), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 83/142 (58%), Positives = 99/142 (69%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  AL EAQ AA ++E+PVGAV      II+RAGN  +   D T HAEI  IRM C  L 
Sbjct: 6   MEIALLEAQWAAKKDEVPVGAVITRGKTIIARAGNFIKTAYDPTGHAEIRVIRMACETLQ 65

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
            E LP+ DLYVTLEPC MCAAAIS ARIRRLYY  ++PKGG IENG +FY   TCHH PE
Sbjct: 66  SERLPDCDLYVTLEPCAMCAAAISFARIRRLYYATNDPKGGAIENGPRFYQQPTCHHKPE 125

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
           IY G  E+ + Q+++DFF ++R
Sbjct: 126 IYSGFKEKEAAQLLKDFFIQKR 147


>gi|257866910|ref|ZP_05646563.1| cytidine/deoxycytidylate deaminase [Enterococcus casseliflavus
           EC30]
 gi|257872573|ref|ZP_05652226.1| cytidine/deoxycytidylate deaminase [Enterococcus casseliflavus
           EC10]
 gi|257800868|gb|EEV29896.1| cytidine/deoxycytidylate deaminase [Enterococcus casseliflavus
           EC30]
 gi|257806737|gb|EEV35559.1| cytidine/deoxycytidylate deaminase [Enterococcus casseliflavus
           EC10]
          Length = 168

 Score =  205 bits (524), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 56/144 (38%), Positives = 79/144 (54%)

Query: 6   VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
            FM  A++EA+ A    E+P+GAV VL+ KII R  N     +   AHAE+ AI   CR 
Sbjct: 14  FFMEEAIKEARKAEGLAEVPIGAVVVLDGKIIGRGHNLRETQQQAAAHAEMFAIEEACRT 73

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           +    L +  L+VTLEPC MC+ A+ LAR+  +Y+GA +PKGG              +H 
Sbjct: 74  VGSWRLEQAQLFVTLEPCPMCSGAMLLARVEEVYFGAYDPKGGTAGTLMNLLEDERFNHW 133

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
             +  GI E+   Q++ DFF+  R
Sbjct: 134 SYVEGGILEEACGQLLTDFFRVLR 157


>gi|168214007|ref|ZP_02639632.1| cytidine/deoxycytidylate deaminase family protein [Clostridium
           perfringens CPE str. F4969]
 gi|170714472|gb|EDT26654.1| cytidine/deoxycytidylate deaminase family protein [Clostridium
           perfringens CPE str. F4969]
          Length = 143

 Score =  205 bits (524), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 58/142 (40%), Positives = 84/142 (59%), Gaps = 1/142 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           +S ALEEA+ A  + E+PVGAV V N +II+RA N    LKD TAHAE+LAIR  C  L+
Sbjct: 2   LSLALEEAEKAREKGEVPVGAVIVKNGEIIARAHNLKETLKDPTAHAEMLAIREACNKLN 61

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
              L   ++YVTLEPC MCA AI  +R+ ++Y G  +   G   +          ++  E
Sbjct: 62  NWRLHGCEMYVTLEPCPMCAGAILQSRLSKIYIGTFDDTTGAAGSVVNILQNHNLNYFLE 121

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
           +    ++++  +I+  FFK+RR
Sbjct: 122 VVWE-NDEKCSKILTKFFKDRR 142


>gi|297539076|ref|YP_003674845.1| CMP/dCMP deaminase zinc-binding protein [Methylotenera sp. 301]
 gi|297258423|gb|ADI30268.1| CMP/dCMP deaminase zinc-binding protein [Methylotenera sp. 301]
          Length = 162

 Score =  205 bits (524), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 59/146 (40%), Positives = 78/146 (53%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
              +M  AL  AQ AA   E+PVGA+ V +  +I R GN   +  D TAHAEI A+R   
Sbjct: 14  DEHYMQIALALAQEAAAAGEVPVGAIIVKDGVVIGRGGNSPIDTHDPTAHAEIAALRDAA 73

Query: 64  RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123
           + L    L    LYVTLEPC MC  AI  ARI RL YGA++PK G   +          +
Sbjct: 74  KNLGNYRLVGCSLYVTLEPCAMCTGAIQHARIARLVYGANDPKTGACGSVVNLMAEPKLN 133

Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149
           H  E++ G   +    ++ +FFK+RR
Sbjct: 134 HHTEVFSGELAKECGAMLSEFFKQRR 159


>gi|88813490|ref|ZP_01128725.1| zinc-binding domain protein [Nitrococcus mobilis Nb-231]
 gi|88789280|gb|EAR20412.1| zinc-binding domain protein [Nitrococcus mobilis Nb-231]
          Length = 181

 Score =  205 bits (524), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 55/148 (37%), Positives = 80/148 (54%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
            +   FM+ ALE A+ A    E+PVGAV V   +++    NR    +D TAHAEI A+R 
Sbjct: 24  DQDQAFMARALELARRAQAHGEVPVGAVVVQRERVVGEGYNRPIATRDPTAHAEIEALRA 83

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
             + L    LP   LYVTLEPC MC  A+  AR+ RL +GA +PK G      +     +
Sbjct: 84  AGQALGAYRLPATTLYVTLEPCAMCVGALIHARVARLVFGAHDPKTGACGGALRLIDYPS 143

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H   +  G+  +   +I++ FF++RR
Sbjct: 144 HNHRIALCGGVLAETCSEILRAFFRDRR 171


>gi|325911630|ref|ZP_08174038.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Lactobacillus iners UPII 143-D]
 gi|325476616|gb|EGC79774.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Lactobacillus iners UPII 143-D]
          Length = 158

 Score =  205 bits (523), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 57/149 (38%), Positives = 85/149 (57%), Gaps = 1/149 (0%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIR 60
           ++    M  A  EA  A  + EIP+GAV V     +I R  NR    +D T HAEI+AI+
Sbjct: 5   EEKERIMKLAFLEADKAEQQGEIPIGAVIVDAKGNLIGRGYNRRELDEDATRHAEIIAIQ 64

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
             C+ L+   L +  L+VTLEPC MCA AI  AR++ +YYGA +PK G   +    +   
Sbjct: 65  EACKNLNSWRLIDCSLFVTLEPCPMCAGAIINARLKNVYYGAFDPKAGACGSVVDLFAFT 124

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H P+I+ G+  +++ Q +++FFK  R
Sbjct: 125 KFNHHPQIFGGLYREQAAQQLKNFFKNIR 153


>gi|256823046|ref|YP_003147009.1| CMP/dCMP deaminase zinc-binding [Kangiella koreensis DSM 16069]
 gi|256796585|gb|ACV27241.1| CMP/dCMP deaminase zinc-binding [Kangiella koreensis DSM 16069]
          Length = 159

 Score =  205 bits (523), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 45/153 (29%), Positives = 76/153 (49%), Gaps = 4/153 (2%)

Query: 1   MKKGNVF----MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56
           M     F    M  A + A  A  + E+PVGAV   + +I +   N+     D TAHAE+
Sbjct: 1   MTDFTDFDQHCMQRAFDLASIAEEKGEVPVGAVLAKDGEIKTEGFNQPIFNHDPTAHAEM 60

Query: 57  LAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116
           + +R   + L    L +  LYVTLEPC MCA A+  AR+ R+ +  ++P+ G   +    
Sbjct: 61  VVLRAAGQKLDNYRLVDTTLYVTLEPCAMCAMAMVHARVSRVVFATTDPRTGAAGSVLNI 120

Query: 117 YTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
               + +H   +  G+ ++   + ++ FF+ +R
Sbjct: 121 LQNPSFNHQCVVESGLLQEDCSEQLKRFFRNKR 153


>gi|312870914|ref|ZP_07731019.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Lactobacillus iners LEAF 3008A-a]
 gi|311093604|gb|EFQ51943.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Lactobacillus iners LEAF 3008A-a]
          Length = 158

 Score =  205 bits (523), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 57/149 (38%), Positives = 85/149 (57%), Gaps = 1/149 (0%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIR 60
           ++    M  A  EA  A  + EIP+GAV V     +I R  NR    +D T HAEI+AI+
Sbjct: 5   EEKERIMKLAFLEADKAEQQGEIPIGAVIVDAEGNLIGRGYNRRELDEDATRHAEIIAIQ 64

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
             C+ L+   L +  L+VTLEPC MCA AI  AR++ +YYGA +PK G   +    +   
Sbjct: 65  EACKNLNSWRLIDCSLFVTLEPCPMCAGAIINARLKNVYYGAFDPKAGACGSVVDLFAFT 124

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H P+I+ G+  +++ Q +++FFK  R
Sbjct: 125 KFNHHPQIFGGLYREQAAQQLKNFFKNIR 153


>gi|125597284|gb|EAZ37064.1| hypothetical protein OsJ_21407 [Oryza sativa Japonica Group]
          Length = 1528

 Score =  205 bits (523), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 63/167 (37%), Positives = 80/167 (47%), Gaps = 19/167 (11%)

Query: 2    KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
            K   +FM  AL EAQ AA   E+PVGAV V N +II+R  N   +L+D TAHAEI+ IR 
Sbjct: 1326 KTDELFMREALHEAQRAADLWEVPVGAVLVQNGEIIARGCNLVEDLRDSTAHAEIVCIRE 1385

Query: 62   GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFY---- 117
                L    L +  LYVTLEPC MCA AI  AR+  + +GA N   G   +  + +    
Sbjct: 1386 ASNKLKTWRLADTTLYVTLEPCAMCAGAILQARVDTVVWGAPNKLLGADGSWVRLFPGDG 1445

Query: 118  ---------------TLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
                            +   H    I  GI      +I+Q FF  RR
Sbjct: 1446 QTSSLDSANTNQGAGPVHPFHPKISIRRGILSAECSEIMQQFFHLRR 1492


>gi|125555393|gb|EAZ00999.1| hypothetical protein OsI_23033 [Oryza sativa Indica Group]
          Length = 1593

 Score =  205 bits (523), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 63/167 (37%), Positives = 80/167 (47%), Gaps = 19/167 (11%)

Query: 2    KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
            K   +FM  AL EAQ AA   E+PVGAV V N +II+R  N   +L+D TAHAEI+ IR 
Sbjct: 1390 KTDELFMREALHEAQRAADLWEVPVGAVLVQNGEIIARGCNLVEDLRDSTAHAEIVCIRE 1449

Query: 62   GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFY---- 117
                L    L +  LYVTLEPC MCA AI  AR+  + +GA N   G   +  + +    
Sbjct: 1450 ASNKLKTWRLADTTLYVTLEPCAMCAGAILQARVDTVVWGAPNKLLGADGSWVRLFPGDG 1509

Query: 118  ---------------TLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
                            +   H    I  GI      +I+Q FF  RR
Sbjct: 1510 QTSSLDSANTNQGAGPVHPFHPKISIRRGILSAECSEIMQQFFHLRR 1556


>gi|110798954|ref|YP_694504.1| cytidine/deoxycytidylate deaminase family protein [Clostridium
           perfringens ATCC 13124]
 gi|169343373|ref|ZP_02864377.1| cytidine/deoxycytidylate deaminase family protein [Clostridium
           perfringens C str. JGS1495]
 gi|182625368|ref|ZP_02953141.1| tRNA-specific adenosine deaminase [Clostridium perfringens D str.
           JGS1721]
 gi|110673601|gb|ABG82588.1| cytidine/deoxycytidylate deaminase family protein [Clostridium
           perfringens ATCC 13124]
 gi|169298459|gb|EDS80545.1| cytidine/deoxycytidylate deaminase family protein [Clostridium
           perfringens C str. JGS1495]
 gi|177909365|gb|EDT71817.1| tRNA-specific adenosine deaminase [Clostridium perfringens D str.
           JGS1721]
          Length = 143

 Score =  205 bits (523), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 58/142 (40%), Positives = 84/142 (59%), Gaps = 1/142 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           +S ALEEA+ A  + E+PVGAV V + +II+RA N    LKD TAHAEILAIR  C  L+
Sbjct: 2   LSLALEEAEKAREKGEVPVGAVIVKDGEIIARAHNLKETLKDPTAHAEILAIREACNKLN 61

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
              L   ++YVTLEPC MCA AI  +R+ ++Y G  +   G   +          ++  E
Sbjct: 62  NWRLHGCEMYVTLEPCPMCAGAILQSRLSKIYIGTFDDTTGAAGSVVNILQNHNLNYFLE 121

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
           +    ++++  +I+  FFK+RR
Sbjct: 122 VVWE-NDEKCSKILTKFFKDRR 142


>gi|115468148|ref|NP_001057673.1| Os06g0489500 [Oryza sativa Japonica Group]
 gi|51535686|dbj|BAD37705.1| putative cytosine deaminase [Oryza sativa Japonica Group]
 gi|113595713|dbj|BAF19587.1| Os06g0489500 [Oryza sativa Japonica Group]
          Length = 1590

 Score =  205 bits (523), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 63/167 (37%), Positives = 80/167 (47%), Gaps = 19/167 (11%)

Query: 2    KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
            K   +FM  AL EAQ AA   E+PVGAV V N +II+R  N   +L+D TAHAEI+ IR 
Sbjct: 1388 KTDELFMREALHEAQRAADLWEVPVGAVLVQNGEIIARGCNLVEDLRDSTAHAEIVCIRE 1447

Query: 62   GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFY---- 117
                L    L +  LYVTLEPC MCA AI  AR+  + +GA N   G   +  + +    
Sbjct: 1448 ASNKLKTWRLADTTLYVTLEPCAMCAGAILQARVDTVVWGAPNKLLGADGSWVRLFPGDG 1507

Query: 118  ---------------TLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
                            +   H    I  GI      +I+Q FF  RR
Sbjct: 1508 QTSSLDSANTNQGAGPVHPFHPKISIRRGILSAECSEIMQQFFHLRR 1554


>gi|241764554|ref|ZP_04762572.1| CMP/dCMP deaminase zinc-binding [Acidovorax delafieldii 2AN]
 gi|241365998|gb|EER60615.1| CMP/dCMP deaminase zinc-binding [Acidovorax delafieldii 2AN]
          Length = 454

 Score =  205 bits (523), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 45/128 (35%), Positives = 69/128 (53%)

Query: 22  NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81
            E+PVGAV V + ++I+   N   +  D TAHAEI+A+R     L    L    LYVTLE
Sbjct: 15  GEVPVGAVVVKDGQVIATGRNAPVQSHDPTAHAEIVALRAAAEQLGNYRLDGCTLYVTLE 74

Query: 82  PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141
           PC MC+ A+  AR+ R+ +GA +PK G   +    +     +H  ++  G+       ++
Sbjct: 75  PCAMCSGAMLHARVPRVVFGAVDPKTGAAGSVLDLFGYTVLNHHTQVQGGVLAHDCGALL 134

Query: 142 QDFFKERR 149
             FF++RR
Sbjct: 135 STFFRQRR 142


>gi|258649234|ref|ZP_05736703.1| tRNA-specific adenosine deaminase [Prevotella tannerae ATCC 51259]
 gi|260850414|gb|EEX70283.1| tRNA-specific adenosine deaminase [Prevotella tannerae ATCC 51259]
          Length = 143

 Score =  205 bits (523), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 58/147 (39%), Positives = 82/147 (55%), Gaps = 5/147 (3%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
               +M  AL EA+ A    E+PVGAV V  ++II+RA N    L DVTAHAE+ AI   
Sbjct: 2   TDQEYMQKALIEAKQAFEEGEVPVGAVIVCRDRIIARAHNLTERLTDVTAHAEMQAITAA 61

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
              L  + L +  LYVT+EPC MCA A++ A++ R+ YGAS+PK G        +     
Sbjct: 62  ANALGGKYLTDCTLYVTVEPCVMCAGALAWAQLSRIVYGASDPKRG-----FSVFAPNAL 116

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           H   E+  G+  +    +++DFF+ RR
Sbjct: 117 HPRTEVTEGVLAEECANLMKDFFQRRR 143


>gi|332707760|ref|ZP_08427787.1| tRNA-adenosine deaminase [Lyngbya majuscula 3L]
 gi|332353463|gb|EGJ32976.1| tRNA-adenosine deaminase [Lyngbya majuscula 3L]
          Length = 163

 Score =  205 bits (523), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 65/147 (44%), Positives = 80/147 (54%), Gaps = 1/147 (0%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMG 62
              +M+ A+E AQ A    E+PVGAV V N  K+I+   NR    KD TAHAEILA+R  
Sbjct: 14  HRKWMTVAIEIAQKAGEAGEVPVGAVIVDNEGKLIATGENRRERDKDPTAHAEILALRAA 73

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
            + L    L    LYVTLEPC MCA AI LAR+  L YG  +PK G I         A  
Sbjct: 74  GQQLQSWHLNHCTLYVTLEPCPMCAGAIILARLGLLVYGVDDPKTGSIRTVANLPDSACS 133

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H   +  GI E   R+ +Q +F ERR
Sbjct: 134 NHRLPVLGGIMESVCREQLQSWFAERR 160


>gi|157961143|ref|YP_001501177.1| zinc-binding CMP/dCMP deaminase [Shewanella pealeana ATCC 700345]
 gi|157846143|gb|ABV86642.1| CMP/dCMP deaminase zinc-binding [Shewanella pealeana ATCC 700345]
          Length = 163

 Score =  205 bits (523), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 48/138 (34%), Positives = 73/138 (52%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  A++ A  A  + E+PVGAV V + +++S   N +  L D +AHAE+  +R   +I+ 
Sbjct: 1   MKMAMDMAIKAEEKGEVPVGAVLVKDGEVVSAGFNFSIGLHDPSAHAEMQCLRQAGQIMQ 60

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
              L +  LYVTLEPC MCA AI  +RI RL +GA + K G           +  +H  +
Sbjct: 61  NYRLLDTTLYVTLEPCAMCAGAIVHSRINRLVFGARDEKTGAAGTVIDIVRHSAFNHQVD 120

Query: 128 IYPGISEQRSRQIIQDFF 145
           +  G+ E    + +  FF
Sbjct: 121 VSSGVLETECSEQLSAFF 138


>gi|327438138|dbj|BAK14503.1| cytosine/adenosine deaminase [Solibacillus silvestris StLB046]
          Length = 167

 Score =  205 bits (523), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 58/148 (39%), Positives = 85/148 (57%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
            K + +M  AL+EA+ AA   E+P+GAV V  ++II+RA N     ++   HAE +AI+ 
Sbjct: 4   NKDHQYMQEALKEAKKAAALGEVPIGAVIVYKDEIIARAHNLRETTQNALTHAESMAIQE 63

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
            C+ +    L E  LYVTLEPC MCA AI  +RI R+ YGA + K G +++  +    A 
Sbjct: 64  ACKKVGSWRLEETTLYVTLEPCPMCAGAILQSRIPRVVYGARDIKAGCVDSLYRLLNDAR 123

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H   +  G+  +   QI+ DFFK  R
Sbjct: 124 FNHECTVTEGVMAEECGQILTDFFKALR 151


>gi|33597610|ref|NP_885253.1| putative zinc-binding hydrolase [Bordetella parapertussis 12822]
 gi|33602013|ref|NP_889573.1| putative zinc-binding hydrolase [Bordetella bronchiseptica RB50]
 gi|33574038|emb|CAE38361.1| putative zinc-binding hydrolase [Bordetella parapertussis]
 gi|33576451|emb|CAE33529.1| putative zinc-binding hydrolase [Bordetella bronchiseptica RB50]
          Length = 168

 Score =  205 bits (523), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 58/148 (39%), Positives = 81/148 (54%), Gaps = 1/148 (0%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRM 61
                M+ ALE+AQ AA   E+PVGAV V    +++    NR    +D TAHAEI+A+R 
Sbjct: 15  DDARLMALALEQAQEAARLGEVPVGAVVVDAQGEVLGAGYNRTIIDRDPTAHAEIVALRA 74

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
             R L    LP V LYVTLEPC MC  A+  AR+ R+ YGA +PK G   +      +  
Sbjct: 75  AARRLDNYRLPGVSLYVTLEPCVMCIGAMLHARLARVVYGARDPKTGACGSVLDVGAVGQ 134

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H   I  G+  +   ++++ FF+ RR
Sbjct: 135 LNHHTTITGGVLAEPCGELLRGFFRARR 162


>gi|297838639|ref|XP_002887201.1| cytidine/deoxycytidylate deaminase family protein [Arabidopsis lyrata
            subsp. lyrata]
 gi|297333042|gb|EFH63460.1| cytidine/deoxycytidylate deaminase family protein [Arabidopsis lyrata
            subsp. lyrata]
          Length = 1135

 Score =  205 bits (523), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 62/162 (38%), Positives = 81/162 (50%), Gaps = 16/162 (9%)

Query: 4    GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
              +FM  AL EA+ AA   E+PVGAV V + KII+R  N   EL+D TAHAE++ IR G 
Sbjct: 939  DEIFMREALVEAKKAADTWEVPVGAVLVHDGKIIARGYNLVEELRDSTAHAEMICIREGS 998

Query: 64   RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123
            + L    L +  LYVTLEPC MCA AI  AR+  L +GA N   G   +  + +     +
Sbjct: 999  KALRSWRLADTTLYVTLEPCPMCAGAILQARVNTLVWGAPNKLLGADGSWIRLFPGGEGN 1058

Query: 124  ----------------HSPEIYPGISEQRSRQIIQDFFKERR 149
                                I  G+ E    Q +Q FF+ RR
Sbjct: 1059 GSEVSEKPPPPVHPFHPKMTIRRGVLESECAQTMQQFFQLRR 1100


>gi|294012909|ref|YP_003546369.1| putative deaminase [Sphingobium japonicum UT26S]
 gi|292676239|dbj|BAI97757.1| putative deaminase [Sphingobium japonicum UT26S]
          Length = 156

 Score =  205 bits (523), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 70/142 (49%), Positives = 90/142 (63%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  ALE A+ A    E+P+GAV  L+ + I    NRNR   D TAHAE++AIR     L 
Sbjct: 15  MRRALELARAAGEAGEVPIGAVVTLDGRTIGEGENRNRRDNDPTAHAEMVAIRAAAAHLG 74

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
              L   DL+VTLEPC MCA AIS ARI RLYY A++PKGG IE G +F+T   C H PE
Sbjct: 75  DFRLAGCDLWVTLEPCAMCAGAISHARIARLYYAAADPKGGAIEQGPRFFTQPQCLHRPE 134

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
           +Y G+++  +  +++DFF  RR
Sbjct: 135 VYGGLAQAEASTLLRDFFLARR 156


>gi|110803707|ref|YP_697380.1| cytidine/deoxycytidylate deaminase family protein [Clostridium
           perfringens SM101]
 gi|110684208|gb|ABG87578.1| cytidine/deoxycytidylate deaminase family protein [Clostridium
           perfringens SM101]
          Length = 143

 Score =  205 bits (523), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 59/142 (41%), Positives = 84/142 (59%), Gaps = 1/142 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           +S ALEEA+ A  + E+PVGAV V N +II+RA N    LKD TAHAEILAIR  C  L+
Sbjct: 2   LSLALEEAEKAREKGEVPVGAVIVKNGEIIARAHNLKETLKDPTAHAEILAIREACNKLN 61

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
              L   ++YVTLEPC MCA AI  +R+ ++Y G  +   G   +          ++  E
Sbjct: 62  NWRLHGCEMYVTLEPCPMCAGAILQSRLSKIYIGTFDDTTGAAGSVVNILQNHNLNYFLE 121

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
           +    ++ +  +I+ +FFK+RR
Sbjct: 122 VVWE-NDDKCSKILTNFFKDRR 142


>gi|15221490|ref|NP_177039.1| TADA (TRNA ARGININE ADENOSINE DEAMINASE); catalytic/ hydrolase/ zinc
            ion binding [Arabidopsis thaliana]
 gi|75336834|sp|Q9S7I0|TADA_ARATH RecName: Full=tRNA-specific adenosine deaminase, chloroplastic;
            Short=TADA; Flags: Precursor
 gi|5734706|gb|AAD49971.1|AC008075_4 Contains similarity to gi|3329316 cytosine deaminase from Chlamydia
            trachomatis genome gb|AE001357 and contains a PF|00383
            cytidine deaminase zinc-binding region. EST gb|W43306
            comes from this gene [Arabidopsis thaliana]
 gi|12324145|gb|AAG52046.1|AC011914_16 unknown protein; 92941-88668 [Arabidopsis thaliana]
 gi|332196710|gb|AEE34831.1| tRNA-specific adenosine deaminase [Arabidopsis thaliana]
          Length = 1307

 Score =  205 bits (523), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 62/162 (38%), Positives = 81/162 (50%), Gaps = 16/162 (9%)

Query: 4    GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
              +FM  AL EA+ AA   E+PVGAV V + KII+R  N   EL+D TAHAE++ IR G 
Sbjct: 1110 DEIFMREALVEAKKAADTWEVPVGAVLVHDGKIIARGYNLVEELRDSTAHAEMICIREGS 1169

Query: 64   RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123
            + L    L +  LYVTLEPC MCA AI  AR+  L +GA N   G   +  + +     +
Sbjct: 1170 KALRSWRLADTTLYVTLEPCPMCAGAILQARVNTLVWGAPNKLLGADGSWIRLFPGGEGN 1229

Query: 124  ----------------HSPEIYPGISEQRSRQIIQDFFKERR 149
                                I  G+ E    Q +Q FF+ RR
Sbjct: 1230 GSEASEKPPPPVHPFHPKMTIRRGVLESECAQTMQQFFQLRR 1271


>gi|26450841|dbj|BAC42528.1| putative deaminase [Arabidopsis thaliana]
 gi|38564244|gb|AAR23701.1| At1g68720 [Arabidopsis thaliana]
          Length = 1307

 Score =  205 bits (523), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 62/162 (38%), Positives = 81/162 (50%), Gaps = 16/162 (9%)

Query: 4    GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
              +FM  AL EA+ AA   E+PVGAV V + KII+R  N   EL+D TAHAE++ IR G 
Sbjct: 1110 DEIFMREALVEAKKAADTWEVPVGAVLVHDGKIIARGYNLVEELRDSTAHAEMICIREGS 1169

Query: 64   RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123
            + L    L +  LYVTLEPC MCA AI  AR+  L +GA N   G   +  + +     +
Sbjct: 1170 KALRSWRLADTTLYVTLEPCPMCAGAILQARVNTLVWGAPNKLLGADGSWIRLFPGGEGN 1229

Query: 124  ----------------HSPEIYPGISEQRSRQIIQDFFKERR 149
                                I  G+ E    Q +Q FF+ RR
Sbjct: 1230 GSEASEKPPPPVHPFHPKMTIRRGVLESECAQTMQQFFQLRR 1271


>gi|240849921|ref|YP_002971310.1| cytidine and deoxycytidylate deaminase [Bartonella grahamii as4aup]
 gi|240267044|gb|ACS50632.1| cytidine and deoxycytidylate deaminase [Bartonella grahamii as4aup]
          Length = 148

 Score =  205 bits (523), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 83/142 (58%), Positives = 100/142 (70%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  AL EAQ AA ++E+PVGAV      II+RAGN  +   D T HAE+ AIRM C  L 
Sbjct: 6   MEIALLEAQWAAKKDEVPVGAVITRGKAIIARAGNFIKSAYDPTGHAEMRAIRMACETLQ 65

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
            E LP+ DLYVTLEPC MCAAAIS ARIRRLYY  ++PKGG IENG +FY   TCHH PE
Sbjct: 66  SERLPDCDLYVTLEPCAMCAAAISFARIRRLYYATNDPKGGAIENGPRFYQQPTCHHKPE 125

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
           IY G  E+ + Q+++DFF ++R
Sbjct: 126 IYSGFKEKEAAQLLKDFFVQKR 147


>gi|218674406|ref|ZP_03524075.1| CMP/dCMP deaminase zinc-binding protein [Rhizobium etli GR56]
          Length = 157

 Score =  205 bits (522), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 90/147 (61%), Positives = 112/147 (76%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
           K N FM  ALEEA+ A  R E+P+GAV V+++  +SR+GNR REL DVTAHAEI AIR+ 
Sbjct: 8   KTNRFMEMALEEARAAGERGEVPIGAVVVIDDIAVSRSGNRTRELNDVTAHAEIAAIRLA 67

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
           C  L QE L   DLYVTLEPCTMCAAAIS ARIRRLYYGA +PKGG ++NG +FY   TC
Sbjct: 68  CEALGQERLAGADLYVTLEPCTMCAAAISFARIRRLYYGAEDPKGGAVDNGVRFYAQPTC 127

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           HH+PE+Y G +E +S +I++ FF ++R
Sbjct: 128 HHAPEVYSGFNEVQSAEILRTFFSQKR 154


>gi|33592773|ref|NP_880417.1| putative zinc-binding hydrolase [Bordetella pertussis Tohama I]
 gi|33572421|emb|CAE41987.1| putative zinc-binding hydrolase [Bordetella pertussis Tohama I]
 gi|332382186|gb|AEE67033.1| putative zinc-binding hydrolase [Bordetella pertussis CS]
          Length = 149

 Score =  205 bits (522), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 58/143 (40%), Positives = 81/143 (56%), Gaps = 1/143 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M+ ALE+AQ AA   E+PVGAV V    +++    NR    +D TAHAEI+A+R   R L
Sbjct: 1   MALALEQAQEAARLGEVPVGAVVVDAQGEVLGTGYNRTIIDRDPTAHAEIVALRAAARRL 60

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               LP V LYVTLEPC MC  A+  AR+ R+ YGA +PK G   +      +   +H  
Sbjct: 61  DNYRLPGVSLYVTLEPCVMCIGAMLHARLARVVYGARDPKTGACGSVLDVGAVGQLNHHT 120

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
            I  G+  +   ++++ FF+ RR
Sbjct: 121 TITGGVLAEPCGELLRGFFRARR 143


>gi|295102136|emb|CBK99681.1| tRNA-adenosine deaminase [Faecalibacterium prausnitzii L2-6]
          Length = 162

 Score =  205 bits (522), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 59/149 (39%), Positives = 85/149 (57%), Gaps = 2/149 (1%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M    + M  ALEEA+ AA   E+PVGAV   + +IIS A N     K+   HAE+LAI 
Sbjct: 1   MTDFEL-MGAALEEARKAAALGEVPVGAVVAKDGEIISAAHNTRETEKNALHHAELLAID 59

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
             C+ L    L + +L+VTLEPC MC+ AI  +RI+R+ YGA++ K G   + T  +   
Sbjct: 60  AACKKLGGWRLWQCELFVTLEPCPMCSGAIINSRIKRVVYGAADVKAGCCGSVTDLFAQP 119

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H P I  G+    ++Q++Q+FF   R
Sbjct: 120 -FNHHPVIEKGLRADEAQQLLQEFFVSLR 147


>gi|192359003|ref|YP_001981836.1| Cytidine and deoxycytidylate deaminase zinc-binding region
           domain-containing protein [Cellvibrio japonicus Ueda107]
 gi|190685168|gb|ACE82846.1| Cytidine and deoxycytidylate deaminase zinc-binding region domain
           protein [Cellvibrio japonicus Ueda107]
          Length = 201

 Score =  205 bits (522), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 51/148 (34%), Positives = 72/148 (48%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           +  + +M  A+  A       E+PVGAV V     I    N+    +D +AHAEI+A+R 
Sbjct: 8   QDDSYWMRRAIALASQGEALGEVPVGAVIVREGIAIGEGFNQPITSRDPSAHAEIVALRQ 67

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
               L    LP   LYVTLEPCTMC  A+  ARI RL YG + PK G + +  +      
Sbjct: 68  AAAHLQNYRLPGATLYVTLEPCTMCVGALVHARITRLVYGTAEPKAGAVTSRARLLDADY 127

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H      G+     +  +  FF++RR
Sbjct: 128 VNHRVSYEGGLMAAECQHQLSHFFQQRR 155


>gi|302552546|ref|ZP_07304888.1| deaminase [Streptomyces viridochromogenes DSM 40736]
 gi|302470164|gb|EFL33257.1| deaminase [Streptomyces viridochromogenes DSM 40736]
          Length = 143

 Score =  205 bits (522), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 52/143 (36%), Positives = 75/143 (52%), Gaps = 2/143 (1%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNK--IISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M  AL+EA  A    ++PVGAV +  +   +++   N      D TAHAE+LA+R     
Sbjct: 1   MRLALDEAAGAVRGGDVPVGAVVLAPDGTTVLASGHNEREAGGDPTAHAELLALRRAAAE 60

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           L    L    L VTLEPCTMCA AI  +R+ RL YGA + K G + +          +H 
Sbjct: 61  LGTWRLAGCTLVVTLEPCTMCAGAIQQSRVDRLVYGARDEKAGAVGSLWDLVRDRRLNHR 120

Query: 126 PEIYPGISEQRSRQIIQDFFKER 148
           PE+  G+  +   Q++ +FF+ R
Sbjct: 121 PEVIEGVLAEECAQLLTEFFRAR 143


>gi|86134359|ref|ZP_01052941.1| cytidine and deoxycytidylate deaminase [Polaribacter sp. MED152]
 gi|85821222|gb|EAQ42369.1| cytidine and deoxycytidylate deaminase [Polaribacter sp. MED152]
          Length = 149

 Score =  205 bits (522), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 64/147 (43%), Positives = 84/147 (57%), Gaps = 6/147 (4%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
               FM  A +EA+ A  + EIPVGAV VLNN+II+RA N    L DVTAHAE+ A    
Sbjct: 6   DDTYFMKKAYQEAEIAFDKGEIPVGAVIVLNNQIIARAHNLTETLNDVTAHAEMQAFTAA 65

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
              L  + L +  LYVTLEPC MCA A   ++I+R+ YGAS PK G +  GTQ       
Sbjct: 66  ANFLGGKYLKDCILYVTLEPCQMCAGASYWSQIQRIVYGASEPKRGFVNLGTQL------ 119

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           H   ++  G+ E     +++ FF E+R
Sbjct: 120 HPKTKVTSGVLENDCSLLLKRFFIEKR 146


>gi|160900241|ref|YP_001565823.1| CMP/dCMP deaminase [Delftia acidovorans SPH-1]
 gi|160365825|gb|ABX37438.1| CMP/dCMP deaminase zinc-binding [Delftia acidovorans SPH-1]
          Length = 475

 Score =  205 bits (522), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 55/147 (37%), Positives = 79/147 (53%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
               +M  ALE A+ AA   E+PVGAV V +  I+ +  N      D TAHAE+LA+R  
Sbjct: 32  DDEAWMRAALELARAAAQAGEVPVGAVIVKDGAIVGQGRNAPVAQGDPTAHAEVLALRDA 91

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
              L    L +  LYVTLEPCTMC+ A+  AR+ R+ YGA+ P+ G   +    + L   
Sbjct: 92  AARLGNYRLDDCTLYVTLEPCTMCSGAMLHARLGRVVYGAAEPRTGAAGSVLDVFALPQI 151

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H  ++  G+       ++ DFF+ RR
Sbjct: 152 NHHTQVTRGVLAGECAALMSDFFRTRR 178


>gi|293379949|ref|ZP_06626050.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Lactobacillus crispatus 214-1]
 gi|290923462|gb|EFE00364.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Lactobacillus crispatus 214-1]
          Length = 156

 Score =  205 bits (522), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 50/143 (34%), Positives = 83/143 (58%), Gaps = 1/143 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  A+++A+ A  + E+P+GAV V  + +++    NR    +D T HAE++AI+  C  L
Sbjct: 1   MQLAIDQAKEAEKQGEVPIGAVVVDPDGRVVGTGYNRRELDEDATQHAEMIAIKEACSKL 60

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  L+VTLEPC MCA AI  +RI+ +Y+GA +PK G   +    +++   +H P
Sbjct: 61  GMWRLIDCSLFVTLEPCPMCAGAIINSRIKDVYFGALDPKAGACGSVVDLFSVEKFNHHP 120

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
               G+   +  Q+++DFF+  R
Sbjct: 121 HAIRGLYRDQCAQMLKDFFRAIR 143


>gi|22297721|ref|NP_680968.1| putative cytidine or deoxycytidylate [Thermosynechococcus elongatus
           BP-1]
 gi|22293898|dbj|BAC07730.1| tlr0177 [Thermosynechococcus elongatus BP-1]
          Length = 164

 Score =  205 bits (522), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 57/147 (38%), Positives = 81/147 (55%), Gaps = 1/147 (0%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
            + +M  A+  A+ A   +E+PVGAV V   N++I+   NR +   D TAHAEI+A+R  
Sbjct: 13  HDFWMQQAIALAEQAGAADEVPVGAVIVSAENELIATGENRRQRDHDPTAHAEIIALRRA 72

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
            + L    L    LYVTLEPC MCA AI  ARI  L YG ++PK G I++  Q       
Sbjct: 73  GQRLGTWYLTGCRLYVTLEPCPMCAGAIVQARIHTLIYGTTDPKSGAIDSVLQLPQSPAV 132

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
            H  ++  G+     RQ +Q +F++ R
Sbjct: 133 FHRIQVIRGVQAVACRQQLQRWFRQHR 159


>gi|168206176|ref|ZP_02632181.1| cytidine/deoxycytidylate deaminase family protein [Clostridium
           perfringens E str. JGS1987]
 gi|170662306|gb|EDT14989.1| cytidine/deoxycytidylate deaminase family protein [Clostridium
           perfringens E str. JGS1987]
          Length = 143

 Score =  205 bits (522), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 59/142 (41%), Positives = 84/142 (59%), Gaps = 1/142 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           +S ALEEA+ A  + E+PVGAV V N +II+RA N    LKD TAHAEILAIR  C  L+
Sbjct: 2   LSLALEEAEKAREKGEVPVGAVIVKNGEIIARAHNLKETLKDPTAHAEILAIREACNKLN 61

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
              L   ++YVTLEPC MCA AI  +R+ ++Y G  +   G   +          ++  E
Sbjct: 62  NWRLHGCEMYVTLEPCPMCAGAILQSRLSKIYIGTFDDTTGAAGSVVNILQNHNLNYFLE 121

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
           +    ++++  +I+  FFK+RR
Sbjct: 122 VVWE-NDEKCSKILTKFFKDRR 142


>gi|88799915|ref|ZP_01115487.1| hypothetical protein MED297_15045 [Reinekea sp. MED297]
 gi|88777346|gb|EAR08549.1| hypothetical protein MED297_15045 [Reinekea sp. MED297]
          Length = 162

 Score =  205 bits (522), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 52/149 (34%), Positives = 79/149 (53%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           ++    +M  AL++A+ A    E+P+GAV    ++II    N+     D +AHAE+LAIR
Sbjct: 2   IRSDEDYMRAALQQAEQAYRAGEVPIGAVVTYQDRIIGEGYNQTITQLDPSAHAEMLAIR 61

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              + +    L    LYVT+EPCTMC   +  +RI  L +GA  PK G I + +  +  A
Sbjct: 62  AAAQAIGNYRLVGCTLYVTIEPCTMCVGLLVHSRIDCLVFGAPEPKAGAIRSASCVHEQA 121

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  EI  G+  +     +  FF+ERR
Sbjct: 122 HFNHEFEIRSGVLAEDCSGTMSRFFRERR 150


>gi|300172664|ref|YP_003771829.1| tRNA-specific adenosine deaminase [Leuconostoc gasicomitatum LMG
           18811]
 gi|299887042|emb|CBL91010.1| tRNA-specific adenosine deaminase [Leuconostoc gasicomitatum LMG
           18811]
          Length = 165

 Score =  205 bits (522), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 62/148 (41%), Positives = 85/148 (57%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           ++ + FM  AL EA+ A    E+P+GAV V +N II+RA N     +  TAHAE+LAI  
Sbjct: 10  EQIDYFMQVALNEAKFAENDGEVPIGAVIVKDNVIIARAHNHREAEQMATAHAELLAIES 69

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
             R+LS   L +  L+VTLEPC MCA AI  ARI  +YYGA + KGGG  +  Q      
Sbjct: 70  ANRLLSSWRLEDTALFVTLEPCIMCAGAIINARIPSVYYGAEDSKGGGTRSLYQLLEDDR 129

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H  +++  I       ++Q FFK+ R
Sbjct: 130 LNHRADVHTNIRGDEGGALLQHFFKKIR 157


>gi|309806673|ref|ZP_07700669.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Lactobacillus iners LactinV 03V1-b]
 gi|308166978|gb|EFO69161.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Lactobacillus iners LactinV 03V1-b]
          Length = 148

 Score =  205 bits (522), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 57/143 (39%), Positives = 83/143 (58%), Gaps = 1/143 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  A  EA  A  + EIP+GAV V     +I R  NR    +D T HAEI+AI+  C+ L
Sbjct: 1   MKLAFLEADKAEQQGEIPIGAVIVDAEGNLIGRGYNRRELDEDATRHAEIIAIQEACKNL 60

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
           +   L +  L+VTLEPC MCA AI  AR++ +YYGA +PK G   +    +     +H P
Sbjct: 61  NSWRLIDCSLFVTLEPCPMCAGAIINARLKNVYYGAFDPKAGACGSVVDLFAFTKFNHHP 120

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           +I+ G+  +++ Q +++FFK  R
Sbjct: 121 QIFGGLYREQAAQQLKNFFKNIR 143


>gi|309803507|ref|ZP_07697600.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Lactobacillus iners LactinV 11V1-d]
 gi|308164391|gb|EFO66645.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Lactobacillus iners LactinV 11V1-d]
          Length = 158

 Score =  205 bits (522), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 57/149 (38%), Positives = 84/149 (56%), Gaps = 1/149 (0%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIR 60
           ++    M  A  EA  A  + EIP+GAV V     +I R  NR    +D T HAEI+AI+
Sbjct: 5   EEKEKIMKLAFLEADKAEKQGEIPIGAVIVDAEGNLIGRGYNRRELDEDATRHAEIIAIQ 64

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
             C+ L+   L +  L+VTLEPC MCA AI  AR++ +YYGA +PK G   +    +   
Sbjct: 65  EACKNLNSWRLIDCSLFVTLEPCPMCAGAIINARLKNVYYGAFDPKAGACGSVVDLFAFT 124

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H P+I+ G+  +++ Q ++ FFK  R
Sbjct: 125 KFNHHPQIFGGLYREQAAQQLKIFFKNIR 153


>gi|163753582|ref|ZP_02160705.1| putative cytosine/adenosine deaminase [Kordia algicida OT-1]
 gi|161325796|gb|EDP97122.1| putative cytosine/adenosine deaminase [Kordia algicida OT-1]
          Length = 151

 Score =  204 bits (521), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 56/147 (38%), Positives = 84/147 (57%), Gaps = 6/147 (4%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
             N FM  AL+EA+ A  + E+PVGAV V++N++I+R  N    L DVTAHAE+ AI   
Sbjct: 8   DDNYFMKKALQEAEMAFEKGEVPVGAVIVIDNRVIARGHNLTETLNDVTAHAEMQAITAA 67

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
              L  + L    LYVTLEPC MCA A+  ++I  + YGA + + G I+  T+       
Sbjct: 68  ANFLGGKYLKRCTLYVTLEPCQMCAGALYWSQISNIVYGARDEERGCIKLNTKL------ 121

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           H    +  G+  + + Q+++ FF ++R
Sbjct: 122 HPKTVMKGGVLAEEASQLLKRFFIQKR 148


>gi|257454187|ref|ZP_05619457.1| tRNA-specific adenosine deaminase [Enhydrobacter aerosaccus SK60]
 gi|257448360|gb|EEV23333.1| tRNA-specific adenosine deaminase [Enhydrobacter aerosaccus SK60]
          Length = 187

 Score =  204 bits (521), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 62/149 (41%), Positives = 86/149 (57%), Gaps = 1/149 (0%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
              + FM  AL+ A     R E+PVGAV V    II++  N+     D TAHAEI+AIR 
Sbjct: 25  DSDDAFMQAALDVAAEGGERGEVPVGAVIVHQGTIIAKGYNQPILSHDATAHAEIVAIRQ 84

Query: 62  GCRILSQEILP-EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
            C+      LP + +L+VTLEPCTMC  AI  AR+ RL + A+ PK G I +   F  +A
Sbjct: 85  ACQYFDNYRLPADCELFVTLEPCTMCLGAIIHARVSRLVFAATEPKAGMIVSQQDFSQVA 144

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H   +  G+  ++SR ++QDFF+ RR
Sbjct: 145 FYNHFLTVKQGVMAEQSRALLQDFFRHRR 173


>gi|300774752|ref|ZP_07084615.1| cytosine deaminase [Chryseobacterium gleum ATCC 35910]
 gi|300506567|gb|EFK37702.1| cytosine deaminase [Chryseobacterium gleum ATCC 35910]
          Length = 143

 Score =  204 bits (521), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 56/149 (37%), Positives = 82/149 (55%), Gaps = 6/149 (4%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M     +M  AL+EA+ A  ++E+P+G V V NN+II+RA N    L DVTAHAE+ AI 
Sbjct: 1   MFTDEYYMKMALQEAEAALEKDEVPIGCVVVSNNRIIARAHNLTETLNDVTAHAEMQAIT 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
                L  + L +  LYVT+EPC MC+ A+S ++I ++  GA + + G            
Sbjct: 61  SAANFLGGKYLKDCTLYVTMEPCVMCSGALSWSQISKVVIGARDEQRGF------INKHL 114

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
           + H   E+  GI E     I++ FFK +R
Sbjct: 115 SLHPKTEVITGIMEAECSSIVKQFFKSKR 143


>gi|229828779|ref|ZP_04454848.1| hypothetical protein GCWU000342_00853 [Shuttleworthia satelles DSM
           14600]
 gi|229793373|gb|EEP29487.1| hypothetical protein GCWU000342_00853 [Shuttleworthia satelles DSM
           14600]
          Length = 154

 Score =  204 bits (521), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 57/142 (40%), Positives = 73/142 (51%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  A+ +A+ A    E+P+G V     KII+R  NR      V  HAEI AI+  CR L 
Sbjct: 1   MKEAIRQARKAEAIEEVPIGCVIEREGKIIARGYNRRNIDHSVLKHAEITAIQKACRKLG 60

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
              L +  LYVTLEPC MCA AI  ARI R+  GA NPK G   +      +   +H  E
Sbjct: 61  DWRLEDCTLYVTLEPCQMCAGAIVQARIPRVVIGAMNPKAGSAGSVINLLQMREFNHQAE 120

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
           I  G+ E+    ++  FF E R
Sbjct: 121 IEKGVMEEDCSALLSHFFAELR 142


>gi|281421269|ref|ZP_06252268.1| tRNA-specific adenosine deaminase [Prevotella copri DSM 18205]
 gi|281404804|gb|EFB35484.1| tRNA-specific adenosine deaminase [Prevotella copri DSM 18205]
          Length = 148

 Score =  204 bits (521), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 65/148 (43%), Positives = 85/148 (57%), Gaps = 5/148 (3%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           KK   +M  AL EAQ A   +EIPVGA+ V  ++IISRA N    L DVTAHAE+ AI  
Sbjct: 6   KKDEAYMRRALMEAQAAFDEDEIPVGAIIVCKDRIISRAHNLTEMLTDVTAHAEMQAITS 65

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
           G  +L  + L +  LYVT+EPC MCA A+  A+I R+ YGAS+ K G        Y    
Sbjct: 66  GANMLGGKYLKDCTLYVTVEPCVMCAGALGWAQISRVVYGASDEKRG-----YTKYAPDA 120

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            H    +  G+ E   R ++QDFF+ +R
Sbjct: 121 LHPKTTVTSGVLEDECRALMQDFFQRKR 148


>gi|331701735|ref|YP_004398694.1| CMP/dCMP deaminase zinc-binding protein [Lactobacillus buchneri
           NRRL B-30929]
 gi|329129078|gb|AEB73631.1| CMP/dCMP deaminase zinc-binding protein [Lactobacillus buchneri
           NRRL B-30929]
          Length = 165

 Score =  204 bits (521), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 57/144 (39%), Positives = 80/144 (55%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           +  + FM  AL EA  A L  E+P+GAV V +  I+ R  N    L D TAHAEILAI+ 
Sbjct: 3   QADSRFMKAALIEANKAYLIGEVPIGAVVVHDGTIVGRGHNLREHLNDGTAHAEILAIQE 62

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
            CR L    L + DLYVT+EPC MCA AI  +RI  + +G+ +PK G   +       + 
Sbjct: 63  ACRTLRSWRLIDCDLYVTIEPCLMCAGAIINSRIENVCFGSRDPKAGATRSLYAVLEDSR 122

Query: 122 CHHSPEIYPGISEQRSRQIIQDFF 145
            +H   +  G+    + +I++DFF
Sbjct: 123 LNHQVNVVEGLYADAASRIMKDFF 146


>gi|150004434|ref|YP_001299178.1| putative cytosine/adenosine deaminase [Bacteroides vulgatus ATCC
           8482]
 gi|212695454|ref|ZP_03303582.1| hypothetical protein BACDOR_05008 [Bacteroides dorei DSM 17855]
 gi|237708840|ref|ZP_04539321.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
 gi|237724273|ref|ZP_04554754.1| cytosine deaminase [Bacteroides sp. D4]
 gi|265755901|ref|ZP_06090368.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
 gi|294775508|ref|ZP_06741020.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Bacteroides vulgatus PC510]
 gi|149932858|gb|ABR39556.1| putative cytosine/adenosine deaminase [Bacteroides vulgatus ATCC
           8482]
 gi|212661991|gb|EEB22565.1| hypothetical protein BACDOR_05008 [Bacteroides dorei DSM 17855]
 gi|229437461|gb|EEO47538.1| cytosine deaminase [Bacteroides dorei 5_1_36/D4]
 gi|229457266|gb|EEO62987.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
 gi|263233979|gb|EEZ19580.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
 gi|294450653|gb|EFG19141.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Bacteroides vulgatus PC510]
          Length = 144

 Score =  204 bits (521), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 60/149 (40%), Positives = 81/149 (54%), Gaps = 5/149 (3%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M     +M  AL EA  AA + E+PVGAV V  ++II R  N    L DVTAHAE+ A+ 
Sbjct: 1   MADDTYYMKQALMEAVKAAEQGEVPVGAVVVCRDRIIGRGHNLTETLNDVTAHAEMQAVT 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
                L  + L E  LYVT+EPC MCA AI+ A+  +L +GA +PK G      Q Y   
Sbjct: 61  AAANTLGGKYLNECTLYVTVEPCVMCAGAIAWAQTGKLVFGAEDPKRG-----YQKYAPD 115

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             H    +  GI      ++++DFFK++R
Sbjct: 116 ALHPKTIVVKGILADECARLMKDFFKKKR 144


>gi|292493710|ref|YP_003529149.1| CMP/dCMP deaminase zinc-binding protein [Nitrosococcus halophilus
           Nc4]
 gi|291582305|gb|ADE16762.1| CMP/dCMP deaminase zinc-binding protein [Nitrosococcus halophilus
           Nc4]
          Length = 142

 Score =  204 bits (521), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 58/142 (40%), Positives = 76/142 (53%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  AL  A++A  R E+PVGAV V   ++++   N     KD TAHAEI AIR   + L 
Sbjct: 1   MHHALVLARHAEERGEVPVGAVLVQEGEMVAEGWNCPITAKDPTAHAEIQAIRAASQQLG 60

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
              L    LYVTLEPC MCA AI  ARI+R+ +GA +PKGG   +          +H  +
Sbjct: 61  NYRLVGTTLYVTLEPCAMCAGAIIQARIQRVVFGAFDPKGGAAGSVLSILPGDRLNHQVQ 120

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
              GI  +    I+  FF+ RR
Sbjct: 121 CQGGILAEPCGAILSAFFRARR 142


>gi|261392718|emb|CAX50291.1| tRNA-specific adenosine deaminase [Neisseria meningitidis 8013]
          Length = 239

 Score =  204 bits (521), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 53/148 (35%), Positives = 80/148 (54%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           ++   FM  AL +A+ ++   EIPVGAV V + KII+ A N      +V+ HAEI A+  
Sbjct: 90  EEMEHFMCEALRQAEQSSADGEIPVGAVIVSDGKIIASAHNTCIADCNVSRHAEINALAQ 149

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
               +    L   D+Y+TLEPC MCA+A+  ARIRR+ YGA+ PK G   +    +    
Sbjct: 150 AGSEMQNYRLDGCDIYITLEPCAMCASALIQARIRRVIYGAAEPKTGAAGSIVNLFADKR 209

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +    I  GI ++    ++  FF+ +R
Sbjct: 210 LNTHTAIRGGILQEECCAVLSRFFQNKR 237


>gi|153952715|ref|YP_001393480.1| hypothetical protein CKL_0054 [Clostridium kluyveri DSM 555]
 gi|219853386|ref|YP_002470508.1| hypothetical protein CKR_0043 [Clostridium kluyveri NBRC 12016]
 gi|146345596|gb|EDK32132.1| TadA [Clostridium kluyveri DSM 555]
 gi|219567110|dbj|BAH05094.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 145

 Score =  204 bits (521), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 61/145 (42%), Positives = 80/145 (55%), Gaps = 1/145 (0%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           + FM  A+++A+ A    E+PVGAV V NN IISRA N    LKD TAHAEILAIR   +
Sbjct: 2   DGFMFEAIKQAEMALQLGEVPVGAVVVKNNNIISRAYNLKETLKDSTAHAEILAIRSASK 61

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
           ++    L +  +YVTLEPC MCA AI   RI RLY G  +P  G   +          +H
Sbjct: 62  VVKNWRLKDCSMYVTLEPCPMCAGAILQCRISRLYIGTFDPVMGACGSVVNILQNNFLNH 121

Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149
             +I   +       +++ FFK RR
Sbjct: 122 WIDIQW-LYNNECSNMLKKFFKNRR 145


>gi|78101280|pdb|2A8N|A Chain A, Biochemical And Structural Studies Of A-To-I Editing By
           Trna:a34 Deaminases At The Wobble Position Of Transfer
           Rna
 gi|78101281|pdb|2A8N|B Chain B, Biochemical And Structural Studies Of A-To-I Editing By
           Trna:a34 Deaminases At The Wobble Position Of Transfer
           Rna
          Length = 144

 Score =  204 bits (521), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 86/144 (59%), Positives = 111/144 (77%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M +   FM  AL EA++A  R+E+P+GAV VL+ ++I+R+GNR REL DVTAHAEI  IR
Sbjct: 1   MAERTHFMELALVEARSAGERDEVPIGAVLVLDGRVIARSGNRTRELNDVTAHAEIAVIR 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
           M C  L QE LP  DLYVTLEPCTMCAAAIS ARIRRLYYGA +PKGG +E+G +F++  
Sbjct: 61  MACEALGQERLPGADLYVTLEPCTMCAAAISFARIRRLYYGAQDPKGGAVESGVRFFSQP 120

Query: 121 TCHHSPEIYPGISEQRSRQIIQDF 144
           TCHH+P++Y G++E  S +I++ F
Sbjct: 121 TCHHAPDVYSGLAESESAEILRQF 144


>gi|170017868|ref|YP_001728787.1| cytosine/adenosine deaminase [Leuconostoc citreum KM20]
 gi|169804725|gb|ACA83343.1| Cytosine/adenosine deaminase [Leuconostoc citreum KM20]
          Length = 169

 Score =  204 bits (520), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 57/148 (38%), Positives = 82/148 (55%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           ++ + FM  AL EA  A    E+P+GAV V NN+II++A N     +  TAHAE++AI  
Sbjct: 10  EQIDYFMQVALNEASIAFNEGEVPIGAVIVKNNQIIAKAHNHREAEQLATAHAELMAIEK 69

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
               L    L    L+VTLEPC MCA AI  +RI  +YYGA + KGG   +  +    A 
Sbjct: 70  ANLKLKSWRLENTALFVTLEPCVMCAGAIINSRIPAVYYGADDVKGGATRSLYRLLEDAR 129

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H   ++ GI  +   Q+++ FF + R
Sbjct: 130 LNHRVAVHHGIRSEDCGQLLKQFFAQIR 157


>gi|119961460|ref|YP_946593.1| cytidine/deoxycytidylate deaminase [Arthrobacter aurescens TC1]
 gi|119948319|gb|ABM07230.1| putative cytidine/deoxycytidylate deaminase [Arthrobacter aurescens
           TC1]
          Length = 177

 Score =  204 bits (520), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 54/159 (33%), Positives = 78/159 (49%), Gaps = 12/159 (7%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRM 61
               +M  AL+EA+ A   +++P+GAV +  +  ++    N      D TAHAEI+AIR 
Sbjct: 10  DHLAWMGLALDEARLALKTDDVPIGAVVLGPDGGVLGSGRNEREAHGDPTAHAEIVAIRE 69

Query: 62  GCRILSQ-----------EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI 110
               L Q             L +  L VTLEPC MCA AI LARI R+ +GA + K G +
Sbjct: 70  AAAALRQLAHDSGASGDGWRLEDCTLVVTLEPCAMCAGAIVLARIPRVVFGAWDEKAGAV 129

Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +          +H  E+Y G+ E     +++DFF   R
Sbjct: 130 GSVFDILRERRLNHWVEVYAGVREDECAALLRDFFATHR 168


>gi|262372477|ref|ZP_06065756.1| ComE operon protein 2 [Acinetobacter junii SH205]
 gi|262312502|gb|EEY93587.1| ComE operon protein 2 [Acinetobacter junii SH205]
          Length = 167

 Score =  204 bits (520), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 61/149 (40%), Positives = 82/149 (55%), Gaps = 1/149 (0%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
            K   +M  A E+A  AA + EIPVGAV V  +KII    N   +L D TAHAEI A+R 
Sbjct: 4   NKDEYWMQFAYEQAAIAASQGEIPVGAVIVSQDKIIGSGYNAPIQLSDPTAHAEIQALRS 63

Query: 62  GCRILSQEILP-EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
            CR +    LP +  LYVTLEPCTMC  A+  ARI+++ +  + PK G + +  Q     
Sbjct: 64  ACRAIENYRLPDDAVLYVTLEPCTMCVGALIHARIQKVIFATTEPKAGSVVSARQLLDNG 123

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H      G  +Q+    + DFFK+RR
Sbjct: 124 YYNHKFVFEQGCLQQQCSAQLSDFFKQRR 152


>gi|312898548|ref|ZP_07757938.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Megasphaera micronuciformis F0359]
 gi|310620467|gb|EFQ04037.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Megasphaera micronuciformis F0359]
          Length = 158

 Score =  204 bits (520), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 60/149 (40%), Positives = 85/149 (57%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M +   +M  A+EEA+ AA   EIP+GAV +   K I+RA N    L   TAHAEILAI 
Sbjct: 1   MTQDEFYMGKAIEEAKKAAAIGEIPIGAVIIYKKKAIARAHNLRETLPSATAHAEILAIE 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
             CR+LS+  L +  LYVT EPC MCA A+  +R+ R+ YG  +PKGGG  +        
Sbjct: 61  EACRVLSRWRLTDCTLYVTAEPCPMCAGAVVNSRLDRIVYGCPDPKGGGTRSLYTIVEDE 120

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  ++  G+       +++ FF++RR
Sbjct: 121 RLNHRAQVTAGVRADECADLLKKFFQKRR 149


>gi|304385470|ref|ZP_07367815.1| tRNA-specific adenosine deaminase [Pediococcus acidilactici DSM
           20284]
 gi|304328677|gb|EFL95898.1| tRNA-specific adenosine deaminase [Pediococcus acidilactici DSM
           20284]
          Length = 161

 Score =  204 bits (520), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 51/145 (35%), Positives = 80/145 (55%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
             +M  AL+EAQ A + +E+P+GAV V + KII R  N     +D T HAE+LAI   C 
Sbjct: 10  QFYMGEALKEAQFAKMIDEVPIGAVVVHDGKIIGRGHNLREHSQDATTHAEVLAITEACA 69

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
            L    L +  L+VT+EPC MC+  I  ++I  +Y+GA + K G + +          +H
Sbjct: 70  YLRSWRLWDCQLFVTIEPCLMCSGTIINSQIPEVYFGARDSKAGAVRSLYTVLEDQRLNH 129

Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149
             E+  G++  ++  +++ FFK  R
Sbjct: 130 QVEVREGVAADQAAGLMKSFFKAIR 154


>gi|311742000|ref|ZP_07715810.1| cytidine and deoxycytidylate deaminase [Aeromicrobium marinum DSM
           15272]
 gi|311314493|gb|EFQ84400.1| cytidine and deoxycytidylate deaminase [Aeromicrobium marinum DSM
           15272]
          Length = 149

 Score =  203 bits (519), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 51/143 (35%), Positives = 72/143 (50%), Gaps = 1/143 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  ALEEA+ A    ++PVGAV +     +I R  N      D   HAE++A+R      
Sbjct: 7   MRLALEEARAALDTGDVPVGAVVLDPAGDVIGRGRNTRERDGDPLGHAEVVALREAAERT 66

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
            Q  L    L VTLEPCTMCA A+  AR+ RL +GA + K G + +          +H P
Sbjct: 67  GQWRLEGCTLVVTLEPCTMCAGALVGARVDRLVFGAWDDKAGAVGSLWDVVRDRRLNHRP 126

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+  G+    S  ++++FF   R
Sbjct: 127 EVVSGVLADESATLLREFFASHR 149


>gi|282897517|ref|ZP_06305518.1| Cytidine/deoxycytidylate deaminase, zinc-binding region protein
           [Raphidiopsis brookii D9]
 gi|281197612|gb|EFA72507.1| Cytidine/deoxycytidylate deaminase, zinc-binding region protein
           [Raphidiopsis brookii D9]
          Length = 185

 Score =  203 bits (519), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 61/150 (40%), Positives = 80/150 (53%), Gaps = 1/150 (0%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAI 59
           +K    +MS AL+ AQ A    E+PVG + V     +I +  NR +  +D TAHAEI+AI
Sbjct: 14  IKYHQGWMSEALKLAQIAGDAGEVPVGCIIVNSQGDLIGQGENRKQRDQDPTAHAEIVAI 73

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
           R   R L    L +  LYVTLEPC MCA AI  AR++ L Y   +PK G I       + 
Sbjct: 74  RSAARTLQNWHLDQCTLYVTLEPCPMCAGAIIHARLQTLVYAVDDPKTGAIRTVINIPSS 133

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
              +H   I  GI E  SRQ +Q +F  +R
Sbjct: 134 PASNHRLRIIGGILESASRQQLQSWFVYQR 163


>gi|328883836|emb|CCA57075.1| tRNA-specific adenosine-34 deaminase [Streptomyces venezuelae ATCC
           10712]
          Length = 190

 Score =  203 bits (519), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 48/142 (33%), Positives = 71/142 (50%), Gaps = 1/142 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  AL EA  A    ++PVGAV +  +  +++RA N      D TAHAE+LA+R      
Sbjct: 49  MRIALAEADAALPAGDVPVGAVVLGPDGAVLARAHNEREATGDPTAHAEVLALRRAAVAT 108

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
            +  L    L VTLEPC MCA A+  +R+ R+ +GA + K G   +          +H P
Sbjct: 109 GEWRLTGCTLVVTLEPCVMCAGALVQSRVERVVFGAPDEKAGAAGSLWDLVRDRRLNHRP 168

Query: 127 EIYPGISEQRSRQIIQDFFKER 148
           E+  G+      + +  FF+ R
Sbjct: 169 EVIQGVLGAECAEQLTAFFRTR 190


>gi|218461412|ref|ZP_03501503.1| putative nitrogen fixation symbiosis related protein [Rhizobium
           etli Kim 5]
          Length = 157

 Score =  203 bits (519), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 89/147 (60%), Positives = 113/147 (76%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
           K N FM  ALEEA+ A  R E+P+GAV V+++  +SR+GNR REL DVTAHAEI AIR+ 
Sbjct: 8   KTNRFMEMALEEARAAGERGEVPIGAVVVIDDIAVSRSGNRTRELNDVTAHAEIAAIRLA 67

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
           C  L QE L   DLYVTLEPCTMCAAAIS AR+RRLYYGA +PKGG ++NG +FY   TC
Sbjct: 68  CEALGQERLAGADLYVTLEPCTMCAAAISFARVRRLYYGAEDPKGGAVDNGVRFYAQPTC 127

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           HH+PE+Y G++E +S +I++ FF ++R
Sbjct: 128 HHAPEVYSGLNEVQSAEILRKFFSQKR 154


>gi|91788312|ref|YP_549264.1| CMP/dCMP deaminase [Polaromonas sp. JS666]
 gi|91697537|gb|ABE44366.1| CMP/dCMP deaminase, zinc-binding protein [Polaromonas sp. JS666]
          Length = 461

 Score =  203 bits (519), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 53/147 (36%), Positives = 84/147 (57%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
               FM  AL +A+ AA   E+PVGAV V + ++I+   N   +  D TAHAEI+A+R  
Sbjct: 2   DDAFFMQLALAQAREAAAVGEVPVGAVVVRHGEVIATGRNAPVDANDPTAHAEIVALRAA 61

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
            + L    L E +L+VTLEPC MC+ A+  AR++R+ +GA++PK G   +    +  +  
Sbjct: 62  AQALGNYRLDECELFVTLEPCAMCSGAMLHARLQRVVFGATDPKTGAAGSVINLFAESRL 121

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H      G+  +   +++Q FF+ RR
Sbjct: 122 NHQTGWQGGVLAEECGELLQAFFRRRR 148


>gi|29830723|ref|NP_825357.1| cytidine/deoxycytidine deaminase [Streptomyces avermitilis MA-4680]
 gi|29607836|dbj|BAC71892.1| putative cytidine/deoxycytidine deaminase [Streptomyces avermitilis
           MA-4680]
          Length = 142

 Score =  203 bits (519), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 53/142 (37%), Positives = 75/142 (52%), Gaps = 1/142 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  AL EA  AA   ++PVGAV +  +  +I+R  N      D TAHAE+LA+R     L
Sbjct: 1   MRLALTEAVRAAESADVPVGAVVLAPDGSVIARGHNEREATGDPTAHAEVLAVRRAAERL 60

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
            +  L    L VTLEPCTMCA A+  +R+ R+ YGA + K G   +          +H P
Sbjct: 61  GRWRLSGCTLVVTLEPCTMCAGALVQSRVDRVVYGARDEKAGAAGSLWDVVRDRRLNHRP 120

Query: 127 EIYPGISEQRSRQIIQDFFKER 148
           E+  G+       ++ +FF+ER
Sbjct: 121 EVIEGVLADECAGLLTEFFRER 142


>gi|15672703|ref|NP_266877.1| hypothetical protein L127182 [Lactococcus lactis subsp. lactis
           Il1403]
 gi|281491217|ref|YP_003353197.1| tRNA-specific adenosine deaminase [Lactococcus lactis subsp. lactis
           KF147]
 gi|12723633|gb|AAK04819.1|AE006305_11 conserved hypothetical protein [Lactococcus lactis subsp. lactis
           Il1403]
 gi|281374958|gb|ADA64476.1| tRNA-specific adenosine deaminase [Lactococcus lactis subsp. lactis
           KF147]
 gi|326406265|gb|ADZ63336.1| tRNA-specific adenosine deaminase [Lactococcus lactis subsp. lactis
           CV56]
          Length = 155

 Score =  203 bits (519), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 60/139 (43%), Positives = 82/139 (58%)

Query: 11  ALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEI 70
           AL+EAQ AA   E+P+G V V + +II+R  NR       T HAE+ AI    + +    
Sbjct: 15  ALKEAQKAAENEEVPIGVVIVKDGEIIARDFNRRELDGRATHHAEVCAIEAANQAVGNWR 74

Query: 71  LPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYP 130
           L +  L+VT+EPC MCA AI LARI ++Y+GA+NPK GG  +  Q       +H  ++  
Sbjct: 75  LLDCALFVTIEPCVMCAGAIGLARIPQVYFGATNPKFGGTVSLYQILEDKRLNHRVQVES 134

Query: 131 GISEQRSRQIIQDFFKERR 149
           GI E    +I+QDFFK RR
Sbjct: 135 GILEDECAKIMQDFFKNRR 153


>gi|15606234|ref|NP_213612.1| hypothetical protein aq_903 [Aquifex aeolicus VF5]
 gi|6226405|sp|O67050|TADA_AQUAE RecName: Full=tRNA-specific adenosine deaminase
 gi|2983443|gb|AAC07025.1| hypothetical protein aq_903 [Aquifex aeolicus VF5]
          Length = 151

 Score =  203 bits (518), Expect = 6e-51,   Method: Composition-based stats.
 Identities = 57/145 (39%), Positives = 87/145 (60%), Gaps = 1/145 (0%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
             F+  AL EA+ A  + E+PVGA+ V   +IIS+A N   ELKD TAHAE+LAI+  CR
Sbjct: 4   EYFLKVALREAKRAFEKGEVPVGAIIVKEGEIISKAHNSVEELKDPTAHAEMLAIKEACR 63

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
            L+ + L   +LYVTLEPC MC+ A+ L+RI ++ + A + K GG+ +        T +H
Sbjct: 64  RLNTKYLEGCELYVTLEPCIMCSYALVLSRIEKVIFSALDKKHGGVVSVFNILDEPTLNH 123

Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149
             +       + + +++ +FFK+ R
Sbjct: 124 RVKWEYYPL-EEASELLSEFFKKLR 147


>gi|254467918|ref|ZP_05081324.1| tRNA-specific adenosine deaminase [beta proteobacterium KB13]
 gi|207086728|gb|EDZ64011.1| tRNA-specific adenosine deaminase [beta proteobacterium KB13]
          Length = 160

 Score =  203 bits (518), Expect = 6e-51,   Method: Composition-based stats.
 Identities = 60/149 (40%), Positives = 85/149 (57%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M     FM  AL+EA+ A   +EIP+GA+  LNN+II R  N   +  D T HAEI+A+R
Sbjct: 12  MTDHTQFMQAALDEAEKARSLDEIPIGAIVTLNNEIIGRGFNSVIKNSDPTCHAEIMALR 71

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
                LS   LPEV+LYVTLEPC MC  AI  AR++++Y+GA + K    +   Q     
Sbjct: 72  DAAHHLSNYRLPEVNLYVTLEPCIMCLGAIFHARVKQVYFGAYDTKFHSCDPSQQLVNNK 131

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H      GI E+    +++++FK +R
Sbjct: 132 IINHHTSFEGGILEEECSTLLKNYFKNKR 160


>gi|86607357|ref|YP_476120.1| cytidine/deoxycytidylate deaminase zinc-binding domain-containing
           protein [Synechococcus sp. JA-3-3Ab]
 gi|86555899|gb|ABD00857.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein
           [Synechococcus sp. JA-3-3Ab]
          Length = 174

 Score =  203 bits (518), Expect = 6e-51,   Method: Composition-based stats.
 Identities = 57/150 (38%), Positives = 85/150 (56%), Gaps = 1/150 (0%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNK-IISRAGNRNRELKDVTAHAEILAI 59
            ++   +M  AL+EA+ A    E+PV A+ V   + +++ + NR    +D TAHAEILA+
Sbjct: 19  WQRHRAWMQLALQEAERAGEAGEVPVAALVVGPGEELLALSSNRRERDRDPTAHAEILAL 78

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
           R   + L    L    LYVTLEPC MCA AIS +R+ ++ YGA +PK G + +       
Sbjct: 79  RQAGQRLGDWQLQGCRLYVTLEPCPMCAGAISQSRLAQVIYGADDPKAGALRSVLNLPAS 138

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
           A   H PE+  G+ E   R+++Q +F  RR
Sbjct: 139 AASFHCPEVIGGVCEAECRRLLQQWFSRRR 168


>gi|60593936|pdb|1WWR|A Chain A, Crystal Structure Of Trna Adenosine Deaminase Tada From
           Aquifex Aeolicus
 gi|60593937|pdb|1WWR|B Chain B, Crystal Structure Of Trna Adenosine Deaminase Tada From
           Aquifex Aeolicus
 gi|60593938|pdb|1WWR|C Chain C, Crystal Structure Of Trna Adenosine Deaminase Tada From
           Aquifex Aeolicus
 gi|60593939|pdb|1WWR|D Chain D, Crystal Structure Of Trna Adenosine Deaminase Tada From
           Aquifex Aeolicus
          Length = 171

 Score =  203 bits (518), Expect = 6e-51,   Method: Composition-based stats.
 Identities = 57/145 (39%), Positives = 87/145 (60%), Gaps = 1/145 (0%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
             F+  AL EA+ A  + E+PVGA+ V   +IIS+A N   ELKD TAHAE+LAI+  CR
Sbjct: 24  EYFLKVALREAKRAFEKGEVPVGAIIVKEGEIISKAHNSVEELKDPTAHAEMLAIKEACR 83

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
            L+ + L   +LYVTLEPC MC+ A+ L+RI ++ + A + K GG+ +        T +H
Sbjct: 84  RLNTKYLEGCELYVTLEPCIMCSYALVLSRIEKVIFSALDKKHGGVVSVFNILDEPTLNH 143

Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149
             +       + + +++ +FFK+ R
Sbjct: 144 RVKWEYYPL-EEASELLSEFFKKLR 167


>gi|50085441|ref|YP_046951.1| putative deaminase [Acinetobacter sp. ADP1]
 gi|49531417|emb|CAG69129.1| putative deaminase [Acinetobacter sp. ADP1]
          Length = 174

 Score =  203 bits (518), Expect = 6e-51,   Method: Composition-based stats.
 Identities = 61/148 (41%), Positives = 81/148 (54%), Gaps = 1/148 (0%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
               +M  A E+A  AA  NE+PVGAV V  NK+I    N    L D TAHAEI AIRM 
Sbjct: 8   NDEYWMQLAYEQAVRAAEHNEVPVGAVIVSQNKVIGSGYNAPITLNDPTAHAEIRAIRMA 67

Query: 63  CRILSQEILP-EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
           C  +    LP +  LYVTLEPCTMC  A+  ARI R+ +  + PK G + +  Q   +  
Sbjct: 68  CESVKNYRLPEDATLYVTLEPCTMCVGALVHARIHRVVFATTEPKAGSLVSARQLLNMGY 127

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H   I  G  + +  + + DFF++RR
Sbjct: 128 YNHKFLIEHGCMQAQCSKQLSDFFRKRR 155


>gi|330998189|ref|ZP_08322015.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Paraprevotella xylaniphila YIT 11841]
 gi|329568881|gb|EGG50679.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Paraprevotella xylaniphila YIT 11841]
          Length = 144

 Score =  203 bits (518), Expect = 6e-51,   Method: Composition-based stats.
 Identities = 60/149 (40%), Positives = 83/149 (55%), Gaps = 5/149 (3%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M     +M  ALEEA+ A   +EIPVGAV V  ++I++RA N    L D TAHAE+  I 
Sbjct: 1   MADDAFYMKKALEEARRAYDEDEIPVGAVVVCGDRILARAHNLTETLTDATAHAEMQVIT 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
                L  + L E  LYVTLEPC MCA AI  A+++RL YGA++ K G      + +   
Sbjct: 61  AAANALGGKYLNECTLYVTLEPCVMCAGAIGWAQVKRLVYGATDEKRG-----YKMFAPQ 115

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             H   E+  G+    +  +++DFFK +R
Sbjct: 116 AIHPRTEVVSGVMADEAVALLKDFFKGKR 144


>gi|254786582|ref|YP_003074011.1| cytidine and deoxycytidylate deaminase family protein
           [Teredinibacter turnerae T7901]
 gi|237687430|gb|ACR14694.1| cytidine and deoxycytidylate deaminase family protein
           [Teredinibacter turnerae T7901]
          Length = 164

 Score =  203 bits (518), Expect = 6e-51,   Method: Composition-based stats.
 Identities = 58/147 (39%), Positives = 78/147 (53%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
               +M+ AL  A+ AA + E+PVGAV V +  II R  N      D + HAEI A+R  
Sbjct: 4   NDEHWMTEALVLAREAAAQGEVPVGAVLVQDGAIIGRGSNNPIGSCDASGHAEICALRDA 63

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
            +      LP   LYVT+EPCTMC  AI  ARI R+ +GA  PK G +E+  +  +    
Sbjct: 64  GQRQKNYRLPNATLYVTIEPCTMCLGAIVHARIARVVFGAPEPKAGVLESNPELLSAKYF 123

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H      G+  Q   ++IQ FFK RR
Sbjct: 124 NHEFAWSGGVCAQECSELIQQFFKFRR 150


>gi|329921024|ref|ZP_08277552.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Lactobacillus iners SPIN 1401G]
 gi|328935300|gb|EGG31780.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Lactobacillus iners SPIN 1401G]
          Length = 158

 Score =  203 bits (518), Expect = 7e-51,   Method: Composition-based stats.
 Identities = 57/149 (38%), Positives = 84/149 (56%), Gaps = 1/149 (0%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIR 60
           ++    M  A  EA  A  + EIP+GAV V     +I R  NR    +D T HAEI+AI+
Sbjct: 5   EEKERIMKLAFLEADKAEQQGEIPIGAVIVDAEGNLIGRGYNRRELDEDATRHAEIIAIQ 64

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
             C+ L+   L +  L+VTLEPC MCA AI  AR++ +YYGA +PK G   +    +   
Sbjct: 65  EACKNLNSWRLIDCSLFVTLEPCPMCAGAIINARLKNVYYGAFDPKAGACGSVVDLFAFT 124

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H P+I+ G+  +++ Q ++ FFK  R
Sbjct: 125 KFNHHPQIFGGLYREQAAQQLKIFFKNIR 153


>gi|307328842|ref|ZP_07608012.1| CMP/dCMP deaminase zinc-binding [Streptomyces violaceusniger Tu
           4113]
 gi|306885507|gb|EFN16523.1| CMP/dCMP deaminase zinc-binding [Streptomyces violaceusniger Tu
           4113]
          Length = 166

 Score =  203 bits (518), Expect = 7e-51,   Method: Composition-based stats.
 Identities = 53/141 (37%), Positives = 73/141 (51%), Gaps = 1/141 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  ALEEA  A    ++PVGAV +  +  ++ R  N      D TAHAE+LA+R     L
Sbjct: 25  MRLALEEAVRAPETGDVPVGAVVLGPDGSVLGRGRNEREAHGDPTAHAEVLALRAAAHHL 84

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L    L VTLEPCTMCA AI L+R+ RL YGA + K G + +          +H P
Sbjct: 85  GGWRLTGCTLVVTLEPCTMCAGAIVLSRLNRLVYGAVDEKAGAVGSLWDVVRDRRLNHRP 144

Query: 127 EIYPGISEQRSRQIIQDFFKE 147
           E+  G+  +     +  FF++
Sbjct: 145 EVIAGVLAEACAAPLTAFFRK 165


>gi|319408052|emb|CBI81706.1| Cytosine/adenosine deaminase [Bartonella schoenbuchensis R1]
          Length = 161

 Score =  203 bits (517), Expect = 7e-51,   Method: Composition-based stats.
 Identities = 80/142 (56%), Positives = 101/142 (71%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  AL EAQ AA ++EIPVGAV +    II+R GN  + + D T HAEI AIR+ C IL 
Sbjct: 6   MEIALLEAQLAAKQDEIPVGAVIMRGKTIIARVGNYTKTVCDPTGHAEIRAIRIACEILQ 65

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
            E +P+ DLYVTLEPC MCAAAIS ARIRRLYY  S+PKGG IE+G +FY   TCHH PE
Sbjct: 66  SERIPDCDLYVTLEPCAMCAAAISFARIRRLYYATSDPKGGAIEHGPRFYQQPTCHHIPE 125

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
           +Y G  E+ +  ++++FF ++R
Sbjct: 126 VYSGFKEKEASHLLKEFFAQKR 147


>gi|113969580|ref|YP_733373.1| CMP/dCMP deaminase, zinc-binding [Shewanella sp. MR-4]
 gi|113884264|gb|ABI38316.1| CMP/dCMP deaminase, zinc-binding [Shewanella sp. MR-4]
          Length = 252

 Score =  203 bits (517), Expect = 7e-51,   Method: Composition-based stats.
 Identities = 50/146 (34%), Positives = 69/146 (47%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
              +M  A+  A+ A    E+PVGAV V   + I+   N +    D  AHAEI  +R   
Sbjct: 89  DEHWMRVAMAMAEKAEAAGEVPVGAVLVKEGQQIATGYNLSISEHDPCAHAEIQCLRAAG 148

Query: 64  RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123
           + +    L +  LYVTLEPC MCA A+  +RI R+ +GA + K G              +
Sbjct: 149 QTIENYRLLDTTLYVTLEPCAMCAGAMVHSRIARVVFGAKDEKTGAAGTVLNLLQHPAFN 208

Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149
           H  EI  G+  Q     +  FFK RR
Sbjct: 209 HQVEITSGVLAQDCADQLSRFFKRRR 234


>gi|229525486|ref|ZP_04414891.1| tRNA-specific adenosine-34 deaminase [Vibrio cholerae bv. albensis
           VL426]
 gi|229339067|gb|EEO04084.1| tRNA-specific adenosine-34 deaminase [Vibrio cholerae bv. albensis
           VL426]
          Length = 193

 Score =  203 bits (517), Expect = 7e-51,   Method: Composition-based stats.
 Identities = 55/147 (37%), Positives = 80/147 (54%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
           +   FM  A+  A  A  + E+PVGAV V + +II+   N +    D TAHAEI  IR  
Sbjct: 27  QDEQFMRRAIALAAQAEAQGEVPVGAVLVRDGEIIAEGWNSSITNHDATAHAEIEVIRKA 86

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
            ++LS   L +  LYVTLEPC MCA A+  +R++R+ YGA + K G        ++    
Sbjct: 87  GKVLSNYRLLDTTLYVTLEPCPMCAGALLHSRVKRIVYGAPDLKAGAAGTVMDLFSSQAA 146

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H   +  G+ E+  R  +Q FF+ RR
Sbjct: 147 YHYATVEKGLLEEECRAQLQAFFQRRR 173


>gi|227547038|ref|ZP_03977087.1| cytidine and deoxycytidylate deaminase [Bifidobacterium longum
           subsp. infantis ATCC 55813]
 gi|227212455|gb|EEI80344.1| cytidine and deoxycytidylate deaminase [Bifidobacterium longum
           subsp. infantis ATCC 55813]
          Length = 177

 Score =  203 bits (517), Expect = 7e-51,   Method: Composition-based stats.
 Identities = 55/150 (36%), Positives = 75/150 (50%), Gaps = 2/150 (1%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAI 59
           M+     M  ALE A  AA   ++PVGAV +    +I+ R  N      D  AHAEI+A+
Sbjct: 29  MEYDEA-MRRALELAGQAAAAGDVPVGAVVLDAAGQIVGRGYNTREADGDPLAHAEIIAM 87

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
           R   + L    L +  L VTLEPC MCA A     I  + +GA +PK G   +       
Sbjct: 88  RQAAQALGAWNLADCTLAVTLEPCPMCAGACIQTHIGTIAFGAWDPKLGACGSIWDIPRD 147

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
               HSPE++ G+ E   + I+ DFF +RR
Sbjct: 148 PHIGHSPEVHGGVLEGECQSILTDFFAQRR 177


>gi|325128107|gb|EGC51002.1| tRNA-specific adenosine deaminase [Neisseria meningitidis N1568]
          Length = 163

 Score =  203 bits (517), Expect = 7e-51,   Method: Composition-based stats.
 Identities = 56/148 (37%), Positives = 82/148 (55%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           ++   FM  AL +A+ +A   EIPVGAV V + KII+ A N      +V+ HAEI A+  
Sbjct: 14  EEMEHFMREALRQAEQSAADGEIPVGAVIVSDGKIIASAHNTCIADCNVSRHAEINALAQ 73

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
             R +    L   D+Y+TLEPC MCA+A+  ARIRR+ YGA+ PK G   +    +    
Sbjct: 74  AGREIQNYRLDGCDIYITLEPCAMCASALIQARIRRVIYGAAEPKTGAAGSIVNLFADKR 133

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +    I  GI ++  R ++  FF+ +R
Sbjct: 134 LNTHTAIRGGILQEECRAVLSRFFQNKR 161


>gi|297158628|gb|ADI08340.1| cytidine/deoxycytidine deaminase [Streptomyces bingchenggensis
           BCW-1]
          Length = 144

 Score =  203 bits (517), Expect = 8e-51,   Method: Composition-based stats.
 Identities = 53/143 (37%), Positives = 74/143 (51%), Gaps = 1/143 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  ALEEA  A    ++PVGAV +  +   +    N      D TAHAE+LA+R     L
Sbjct: 1   MRLALEEAARAPETGDVPVGAVVLGPDGSPLGHGRNEREAHGDPTAHAEVLALRDAAGRL 60

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L    L VTLEPCTMCA AI L+R+ R+ YGA++ K G + +          +H P
Sbjct: 61  GSWRLTGCTLVVTLEPCTMCAGAIVLSRVDRVVYGATDDKAGAVGSLWDVVRDRRLNHRP 120

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+ PG+   +   ++  FF+  R
Sbjct: 121 EVVPGVLADQCAALLTAFFRAPR 143


>gi|294630214|ref|ZP_06708774.1| cytidine and deoxycytidylate deaminase [Streptomyces sp. e14]
 gi|292833547|gb|EFF91896.1| cytidine and deoxycytidylate deaminase [Streptomyces sp. e14]
          Length = 142

 Score =  203 bits (517), Expect = 8e-51,   Method: Composition-based stats.
 Identities = 50/142 (35%), Positives = 74/142 (52%), Gaps = 1/142 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  AL EA+ A    ++PVGAV +  +  ++    N      D TAHAE+LAIR     +
Sbjct: 1   MRLALAEARRAVEGGDVPVGAVVLSADGAVLGAGHNEREATGDPTAHAEVLAIRRAAERV 60

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
            +  L    L VTLEPCTMCA A+ L+R+ R+ YGA + K G   +          +H P
Sbjct: 61  GEWRLSGCTLVVTLEPCTMCAGALVLSRVDRVVYGARDEKAGAAGSLWDVVRDRRLNHRP 120

Query: 127 EIYPGISEQRSRQIIQDFFKER 148
           E+  G+  +    ++ +FF+ R
Sbjct: 121 EVIEGVLAEDCAALLTEFFRAR 142


>gi|87121678|ref|ZP_01077565.1| cytidine/deoxycytidylate deaminase family protein [Marinomonas sp.
           MED121]
 gi|86162929|gb|EAQ64207.1| cytidine/deoxycytidylate deaminase family protein [Marinomonas sp.
           MED121]
          Length = 162

 Score =  203 bits (517), Expect = 8e-51,   Method: Composition-based stats.
 Identities = 64/142 (45%), Positives = 85/142 (59%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  AL  A  AA   E+PVGA+ VL+N+II    N      D TAHAEI AIR  C+ ++
Sbjct: 1   MERALVLADKAATEGEVPVGAILVLDNEIIGEGYNSPISTCDPTAHAEIQAIRDACKNVA 60

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
              LP+  LYVTLEPC+MCA AI  ARI R+ Y A+ PK G +E+  QF+     +HS +
Sbjct: 61  NYRLPKATLYVTLEPCSMCAGAIVHARIARVVYAATEPKSGVVESQNQFFEQDFLNHSVK 120

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
           +  G+    + Q + DFF+ RR
Sbjct: 121 VEAGVLGPFASQKLSDFFQYRR 142


>gi|296111508|ref|YP_003621890.1| hypothetical protein LKI_06910 [Leuconostoc kimchii IMSNU 11154]
 gi|295833040|gb|ADG40921.1| hypothetical protein LKI_06910 [Leuconostoc kimchii IMSNU 11154]
          Length = 164

 Score =  203 bits (517), Expect = 8e-51,   Method: Composition-based stats.
 Identities = 61/148 (41%), Positives = 86/148 (58%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           ++ + FM  AL EAQ A    E+P+GAV V +N+II+RA N     +  TAHAE++AI  
Sbjct: 10  EQIDYFMQVALNEAQLADEAGEVPIGAVIVKDNEIIARAHNHREAHQLATAHAELVAIES 69

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
              IL+   L    L+VTLEPC MCA AI  ARI  +Y+GA++ KGGG  +         
Sbjct: 70  ANHILNSWRLENTALFVTLEPCIMCAGAIINARIPTVYFGAADSKGGGTRSLYHLLEDDR 129

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H  E++P I      +++QDFF + R
Sbjct: 130 LNHRVEVHPDIRASEGGRLLQDFFGKIR 157


>gi|56459694|ref|YP_154975.1| cytosine/adenosine deaminase putative [Idiomarina loihiensis L2TR]
 gi|56178704|gb|AAV81426.1| Cytosine/adenosine deaminase putative [Idiomarina loihiensis L2TR]
          Length = 150

 Score =  203 bits (517), Expect = 8e-51,   Method: Composition-based stats.
 Identities = 54/142 (38%), Positives = 82/142 (57%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  ALE A+ A   +E+PVGAV V+++KI+    N+   L D +AHAE  AIR   + + 
Sbjct: 1   MQRALELAEQAQNADEVPVGAVLVMDDKIVGEGYNQVISLSDPSAHAEAQAIRSAGQAID 60

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
              L    LYVTLEPC MCA  I+ AR++RL +GA++P+ G      +    A+ +H  +
Sbjct: 61  NYRLVNATLYVTLEPCAMCAGLITHARVKRLVFGATDPRTGATGTAIEVINHASMNHKVD 120

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
           +  G+  +    I++ FF+ RR
Sbjct: 121 VESGVLAEECGDILRRFFRARR 142


>gi|116669211|ref|YP_830144.1| tRNA-adenosine deaminase [Arthrobacter sp. FB24]
 gi|116609320|gb|ABK02044.1| tRNA-adenosine deaminase [Arthrobacter sp. FB24]
          Length = 167

 Score =  203 bits (517), Expect = 9e-51,   Method: Composition-based stats.
 Identities = 52/154 (33%), Positives = 76/154 (49%), Gaps = 7/154 (4%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           +   +M  AL EA+ A    ++P+GA+ +  +  I+    N      D TAHAE++AIR 
Sbjct: 7   RHAEWMGLALAEARRALGTGDVPIGAIVIGPDGDILGTGRNEREAHGDPTAHAEMVAIRE 66

Query: 62  GCRILSQ------EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
               L          L E  L VTLEPC MCA A+ LARI R+ +GA + K G   +   
Sbjct: 67  AAARLQSLPQGDGWRLAECTLVVTLEPCAMCAGAVVLARIPRVVFGAWDEKAGAAGSVFD 126

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
                  +H  E+Y G+ EQ    ++++FF   R
Sbjct: 127 ILRERRLNHWVEVYAGVREQECADLLREFFAGHR 160


>gi|332637118|ref|ZP_08415981.1| tRNA-adenosine deaminase [Weissella cibaria KACC 11862]
          Length = 181

 Score =  203 bits (517), Expect = 9e-51,   Method: Composition-based stats.
 Identities = 56/145 (38%), Positives = 84/145 (57%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           + FM  A++EA+ A    E+P+GAV V + +II R  N    L+D + HAE+ AI    R
Sbjct: 10  DYFMGEAIKEAKKAGALGEVPIGAVVVQHGEIIGRGFNLRERLEDASQHAELQAITEANR 69

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
           ++    LP+  L+VTLEPC MCA  I  +RI  +YYGA +PK G + +          +H
Sbjct: 70  LVKSWRLPDAQLFVTLEPCIMCAGIIQQSRISDVYYGAEDPKAGAVHSMYHILEDERLNH 129

Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149
              ++ GI EQ S  ++++FF+E R
Sbjct: 130 QVHVHQGIREQESGDMLRNFFREIR 154


>gi|307825441|ref|ZP_07655660.1| CMP/dCMP deaminase zinc-binding [Methylobacter tundripaludum SV96]
 gi|307733616|gb|EFO04474.1| CMP/dCMP deaminase zinc-binding [Methylobacter tundripaludum SV96]
          Length = 142

 Score =  203 bits (517), Expect = 9e-51,   Method: Composition-based stats.
 Identities = 55/142 (38%), Positives = 78/142 (54%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  A+  AQ A  + E+PVGA+ V +N+ I+   N      D TAHAE++A+R     + 
Sbjct: 1   MRHAIRLAQRAEQQGEVPVGAIVVRDNRCIAEGWNIPITSHDPTAHAEVVAMRGAGVHVQ 60

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
              L +  LYVTLEPC MC  A+S ARI+RL +GA +PK G + N          +H   
Sbjct: 61  NYRLNDATLYVTLEPCVMCIGAMSHARIKRLVFGAYDPKRGAVCNALSLTDAPFLNHRIS 120

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
              G+ E    ++++DFFK RR
Sbjct: 121 WDGGVLETECSEMLRDFFKARR 142


>gi|330443784|ref|YP_004376770.1| cytidine/deoxycytidylate deaminase family protein [Chlamydophila
           pecorum E58]
 gi|328806894|gb|AEB41067.1| cytidine/deoxycytidylate deaminase family protein [Chlamydophila
           pecorum E58]
          Length = 156

 Score =  203 bits (517), Expect = 9e-51,   Method: Composition-based stats.
 Identities = 58/149 (38%), Positives = 85/149 (57%), Gaps = 1/149 (0%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           ++K   FM+ AL+EA+ A  ++E+PVG V V ++KII+R  N   +L+D TAHAEIL I 
Sbjct: 3   IEKNLFFMNEALKEARKAYSQDEVPVGCVLVKDDKIIARGHNSVEKLQDPTAHAEILCIG 62

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
                +    L    LY TLEPC MCA AI LARI R+ +GA + + G   +    +   
Sbjct: 63  AAAEFVQNWRLVNTTLYCTLEPCLMCAGAIQLARISRVVWGAPDLRLGACGSWINVFAQK 122

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
              H+ E    I  + S ++++ FF E+R
Sbjct: 123 HPFHTVEC-SKIYCEESERLMKQFFIEKR 150


>gi|255261482|ref|ZP_05340824.1| tRNA-specific adenosine deaminase [Thalassiobium sp. R2A62]
 gi|255103817|gb|EET46491.1| tRNA-specific adenosine deaminase [Thalassiobium sp. R2A62]
          Length = 147

 Score =  203 bits (517), Expect = 9e-51,   Method: Composition-based stats.
 Identities = 75/143 (52%), Positives = 94/143 (65%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  ALE+A+ A  R E+PVGAV V + K+++  GNR RE  D TAHAE+LAIR  C   
Sbjct: 5   FMDQALEQARLAGARGEVPVGAVVVADGKVVAAQGNRTRERNDPTAHAEVLAIREACAAA 64

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
             E L   DLYVTLEPC MCA  IS ARI RLYYGA +PK GGI  G + +T + CHH P
Sbjct: 65  GSERLVGHDLYVTLEPCPMCATVISNARIARLYYGAGDPKSGGIVQGPRIFTHSQCHHVP 124

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+Y GI  + + ++++ FF   R
Sbjct: 125 EVYDGIGAEAASEMLRAFFAGLR 147


>gi|296455106|ref|YP_003662250.1| CMP/dCMP deaminase [Bifidobacterium longum subsp. longum JDM301]
 gi|296184538|gb|ADH01420.1| CMP/dCMP deaminase, zinc-binding protein [Bifidobacterium longum
           subsp. longum JDM301]
          Length = 174

 Score =  202 bits (516), Expect = 9e-51,   Method: Composition-based stats.
 Identities = 55/150 (36%), Positives = 75/150 (50%), Gaps = 2/150 (1%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAI 59
           M+     M  ALE A  AA   ++PVGAV +    +I+ R  N      D  AHAEI+A+
Sbjct: 26  MEYDEA-MRRALELAGQAAAAGDVPVGAVVLDAAGQIVGRGYNTREADGDPLAHAEIIAM 84

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
           R   + L    L +  L VTLEPC MCA A     I  + +GA +PK G   +       
Sbjct: 85  RQAAQALGAWNLADCTLAVTLEPCPMCAGACIQTHIGTIAFGAWDPKLGACGSIWDIPRD 144

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
               HSPE++ G+ E   + I+ DFF +RR
Sbjct: 145 PHIGHSPEVHGGVLEGECQSILTDFFAQRR 174


>gi|325298404|ref|YP_004258321.1| CMP/dCMP deaminase zinc-binding protein [Bacteroides salanitronis
           DSM 18170]
 gi|324317957|gb|ADY35848.1| CMP/dCMP deaminase zinc-binding protein [Bacteroides salanitronis
           DSM 18170]
          Length = 144

 Score =  202 bits (516), Expect = 9e-51,   Method: Composition-based stats.
 Identities = 59/149 (39%), Positives = 82/149 (55%), Gaps = 5/149 (3%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M     +M  AL EA+ A+ R E+PVGAV V   +II+RA N    L DVTAHAE+ AI 
Sbjct: 1   MADDTFYMKQALAEAEKASARGEVPVGAVVVCQGRIIARAHNLTETLNDVTAHAEMQAIT 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
                L  + L +  LYVT+EPC MCA AI+ A++ +L +GA + K G        Y  A
Sbjct: 61  AAANALGAKYLNDCTLYVTVEPCVMCAGAIAWAQLGKLVFGAGDEKRG-----YMRYAPA 115

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             H   E+  G+ +     ++  FF++RR
Sbjct: 116 ALHPKTEVVSGVLKDECAGLMTAFFRKRR 144


>gi|288802991|ref|ZP_06408427.1| cytidine/deoxycytidylate deaminase family protein [Prevotella
           melaninogenica D18]
 gi|302345191|ref|YP_003813544.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Prevotella melaninogenica ATCC 25845]
 gi|288334508|gb|EFC72947.1| cytidine/deoxycytidylate deaminase family protein [Prevotella
           melaninogenica D18]
 gi|302149710|gb|ADK95972.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Prevotella melaninogenica ATCC 25845]
          Length = 150

 Score =  202 bits (516), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 63/148 (42%), Positives = 83/148 (56%), Gaps = 5/148 (3%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           KK   FM  AL EA+ A    EIP+GAV V  ++II+RA N    L DVTAHAE+ AI M
Sbjct: 8   KKDLYFMQRALAEAEAAYKEGEIPIGAVVVCRDRIIARAHNLTETLNDVTAHAEMQAITM 67

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
               L  + L +  LYVT+EPC MCA AI  A+++R+ YG  + K G        Y    
Sbjct: 68  AANELGGKYLQDCTLYVTVEPCIMCAGAIGWAQLQRIVYGCPDEKRG-----YHEYAPKA 122

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            H    +  G+ E+  R ++Q FF+ERR
Sbjct: 123 FHPKANVTYGVMEEECRALMQRFFQERR 150


>gi|311112334|ref|YP_003983556.1| tRNA-adenosine deaminase [Rothia dentocariosa ATCC 17931]
 gi|310943828|gb|ADP40122.1| tRNA-adenosine deaminase [Rothia dentocariosa ATCC 17931]
          Length = 176

 Score =  202 bits (516), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 52/148 (35%), Positives = 73/148 (49%), Gaps = 1/148 (0%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           +   +M  AL+E + AA   EIP+GAV V    +II    N      D T HAEI AIR 
Sbjct: 24  EHERWMRLALDEGKRAACAGEIPIGAVVVNAEGEIIGSGHNSREHDHDPTGHAEIHAIRQ 83

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
             + L    L E  L VT+EPC MCA AI +ARI  +  GA   K G + +         
Sbjct: 84  AAQHLKTWRLEECTLVVTVEPCLMCAGAILMARIPTVVMGAWEEKTGAVGSQYDVLRDRR 143

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
                ++Y G+  +   ++++ FF+ RR
Sbjct: 144 LGLDVQVYAGVLREECAELMRTFFEVRR 171


>gi|1296969|emb|CAA65178.1| orf150 [Porphyromonas gingivalis]
          Length = 150

 Score =  202 bits (516), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 62/148 (41%), Positives = 82/148 (55%), Gaps = 5/148 (3%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
                +M  ALEEA+ AA   EIP+GAV V   +I++RA NR   L D TAHAE+LAI M
Sbjct: 8   TDDIRYMRIALEEARAAADEGEIPIGAVIVCKGQIVARAHNRVERLNDPTAHAEMLAITM 67

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
               +  + L +  LYVT+EPC MCA A+   +I R+ YGAS PK G      + +T   
Sbjct: 68  AVDAIGGKYLRDCTLYVTVEPCLMCAGALRWTQIPRVVYGASEPKVG-----YRLFTDHA 122

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            H    +  GI    S  +++ FF ERR
Sbjct: 123 LHPKCLVEGGILADESENLMRSFFAERR 150


>gi|329943103|ref|ZP_08291877.1| cytidine and deoxycytidylate deaminase zinc-binding region family
           protein [Chlamydophila psittaci Cal10]
 gi|332287685|ref|YP_004422586.1| cytidine/deoxycytidylate deaminase family protein [Chlamydophila
           psittaci 6BC]
 gi|325506881|gb|ADZ18519.1| cytidine/deoxycytidylate deaminase family protein [Chlamydophila
           psittaci 6BC]
 gi|328814650|gb|EGF84640.1| cytidine and deoxycytidylate deaminase zinc-binding region family
           protein [Chlamydophila psittaci Cal10]
          Length = 148

 Score =  202 bits (516), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 57/142 (40%), Positives = 80/142 (56%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M+ AL+EA+ A   +E+PVG V V +NKII+R  N   +L+D TAHAEIL I    + L 
Sbjct: 1   MNQALKEARQAYDEDEVPVGCVIVKDNKIIARGHNTTEKLQDPTAHAEILCIGAAAQYLE 60

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
              L +  LY TLEPC MCA AI  ARIRR+ + A + + G   +    +      H  E
Sbjct: 61  NWRLVDTVLYCTLEPCLMCAGAIQQARIRRIVWAAPDLRLGAGGSWINVFKEKHPFHQVE 120

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
              GI  + + Q+++ FF  +R
Sbjct: 121 CCSGICREDAEQLMKQFFIGKR 142


>gi|21673220|ref|NP_661285.1| cytosine deaminase, putative [Chlorobium tepidum TLS]
 gi|21646303|gb|AAM71627.1| cytosine deaminase, putative [Chlorobium tepidum TLS]
          Length = 152

 Score =  202 bits (516), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 59/150 (39%), Positives = 80/150 (53%), Gaps = 1/150 (0%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNK-IISRAGNRNRELKDVTAHAEILAI 59
           M   N  M  A  EA  A    E+PVGAV +  N  II R  N+   L D TAHAE++A+
Sbjct: 1   MSDLNHCMELAFREAIKAYESKEVPVGAVVLDPNGLIIGRGYNQVETLSDATAHAEMIAL 60

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
                 +  + L    L VTLEPC MCA AI L++I R+ +GA +PK G           
Sbjct: 61  TSAMATIGSKYLEGCTLAVTLEPCPMCAGAIVLSKISRVVFGAWDPKMGAAGTVLNITAC 120

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
              +H PE+Y GI E+++  ++QDFF+  R
Sbjct: 121 NALNHQPEVYGGIMERKAESLLQDFFRGLR 150


>gi|222053168|ref|YP_002535530.1| CMP/dCMP deaminase zinc-binding [Geobacter sp. FRC-32]
 gi|221562457|gb|ACM18429.1| CMP/dCMP deaminase zinc-binding [Geobacter sp. FRC-32]
          Length = 161

 Score =  202 bits (516), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 55/148 (37%), Positives = 81/148 (54%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           +    +M  A+ +A+ AA R E+P+GAV V + KII+R  N    ++D +AHAE++AIR 
Sbjct: 5   RDDAFWMGKAIAQAEKAAARGEVPIGAVIVRDGKIIARGHNLREGMQDPSAHAELIAIRR 64

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
           G +      L    LYVTLEPC MC  AI LAR+ ++ +G  +PKGG   +       + 
Sbjct: 65  GAKKNGNWRLLGTTLYVTLEPCLMCMGAILLARVEKVVFGCHDPKGGAAGSLYNLSDDSR 124

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H   +  GI E     ++ DFF   R
Sbjct: 125 LNHRVTLVSGIREAECAALLSDFFAALR 152


>gi|118444046|ref|YP_879269.1| cytidine/deoxycytidylate deaminase family protein, pytative
           [Clostridium novyi NT]
 gi|118134502|gb|ABK61546.1| cytidine/deoxycytidylate deaminase family protein, pytative
           [Clostridium novyi NT]
          Length = 147

 Score =  202 bits (516), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 60/146 (41%), Positives = 84/146 (57%), Gaps = 1/146 (0%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
              FM  AL+EA+ AAL++E+PVGAV V N ++I+ A N    L D TAHAEILAI+   
Sbjct: 2   DKKFMEIALDEAKIAALKDEVPVGAVIVKNGEVIASAHNLRETLNDPTAHAEILAIKKAS 61

Query: 64  RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123
            IL    L E ++YVTLEPC MC+ AI  +RIR+LY G  +P  G   +           
Sbjct: 62  SILKNWRLNECEMYVTLEPCPMCSGAILQSRIRKLYIGTIDPSMGCCGSVVDLVQNRYLK 121

Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149
            + +I    ++ R   I+ +FF+ +R
Sbjct: 122 TALDIKW-FNDDRCSSILTNFFRSKR 146


>gi|157964979|ref|YP_001499803.1| cytosine deaminase [Rickettsia massiliae MTU5]
 gi|157844755|gb|ABV85256.1| Cytosine deaminase [Rickettsia massiliae MTU5]
          Length = 190

 Score =  202 bits (516), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 66/148 (44%), Positives = 96/148 (64%), Gaps = 2/148 (1%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVL--NNKIISRAGNRNRELKDVTAHAEILAIRM 61
            N FM  AL++A+ A  +NE+PVGAV V   N KII+   N      +   HAEI+AI  
Sbjct: 14  NNFFMEQALKQAKIAFDKNEVPVGAVIVDRLNQKIIASTHNNTEAKNNALYHAEIIAINE 73

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
            C ++S + L + D+YVTLEPC MCAAAI+ +R++RL+YGAS+ K G +E+  +++  + 
Sbjct: 74  ACNLISSKNLNDYDIYVTLEPCAMCAAAIAHSRLKRLFYGASDSKHGAVESNLRYFNSSA 133

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
           C H PEIY GI  + S  ++++FFK  R
Sbjct: 134 CFHRPEIYSGILAEDSGLLMKEFFKRIR 161


>gi|332880818|ref|ZP_08448489.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Capnocytophaga sp. oral taxon 329 str. F0087]
 gi|332681201|gb|EGJ54127.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Capnocytophaga sp. oral taxon 329 str. F0087]
          Length = 144

 Score =  202 bits (516), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 62/149 (41%), Positives = 84/149 (56%), Gaps = 5/149 (3%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M     +M  ALEEA+ A   +EIPVGAV V  ++I++RA N    L DVTAHAE+  I 
Sbjct: 1   MATDAFYMKKALEEARRAYEEDEIPVGAVVVCGDRILARAHNLTETLTDVTAHAEMQVIT 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
                L  + L E  LYVTLEPC MCA AI  A+++RL YGA++ K G      + +   
Sbjct: 61  AAANALGGKYLNECTLYVTLEPCVMCAGAIGWAQVKRLVYGATDEKRG-----YRMFAPQ 115

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             H   E+  G+    S  +++DFFK +R
Sbjct: 116 AIHPRTEVVSGVMADESMALLKDFFKGKR 144


>gi|168705456|ref|ZP_02737733.1| cytidine/deoxycytidylate deaminase family protein [Gemmata
           obscuriglobus UQM 2246]
          Length = 167

 Score =  202 bits (516), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 54/143 (37%), Positives = 75/143 (52%), Gaps = 1/143 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNN-KIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  AL+EA  AA  +E+PVGA+ V     +I +A N    L D TAHAE++AI      L
Sbjct: 20  MEMALDEAAVAASEDEVPVGALIVHPELGVIGQAHNMRERLNDPTAHAEMIAITQAATAL 79

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  LYVTLEPC MCA  I  AR+  + YG ++PK G      Q  +    +H  
Sbjct: 80  KSWRLEKCILYVTLEPCPMCAGGIVQARVPMVVYGCTDPKAGACHTLFQIASDPRLNHRA 139

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           ++  G+   R    + DFF+ +R
Sbjct: 140 QVVGGVLADRCAAALTDFFRRKR 162


>gi|262370390|ref|ZP_06063716.1| conserved hypothetical protein [Acinetobacter johnsonii SH046]
 gi|262314732|gb|EEY95773.1| conserved hypothetical protein [Acinetobacter johnsonii SH046]
          Length = 166

 Score =  202 bits (516), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 58/150 (38%), Positives = 84/150 (56%), Gaps = 1/150 (0%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +K  + +M  ALE+A  AA + E+PVGAV V  NKII    N    L D TAHAE+ A+R
Sbjct: 5   LKIDSEWMQLALEQAAIAASKGEVPVGAVIVSQNKIIGSGFNAPITLNDPTAHAEVQALR 64

Query: 61  MGCRILSQEILP-EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
             C+      LP +  +YVTLEPCTMC  A+  AR+ ++ +GA+ PK G + +  + +  
Sbjct: 65  DACQNTQNYRLPDDAVMYVTLEPCTMCVGALVHARVSKVVFGATEPKAGSLISARKLFET 124

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
              +H   +  G   ++  Q +  FFK RR
Sbjct: 125 GYYNHQFLVESGCLHEQCSQQLSHFFKMRR 154


>gi|229530028|ref|ZP_04419418.1| tRNA-specific adenosine-34 deaminase [Vibrio cholerae 12129(1)]
 gi|229333802|gb|EEN99288.1| tRNA-specific adenosine-34 deaminase [Vibrio cholerae 12129(1)]
          Length = 193

 Score =  202 bits (515), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 55/147 (37%), Positives = 79/147 (53%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
           +   FM  A+  A  A  + E+PVGAV V + +II+   N +    D TAHAEI  IR  
Sbjct: 27  QDEQFMRRAIALAAQAEAQGEVPVGAVLVRDGEIIAEGWNGSITNHDATAHAEIEVIRKA 86

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
            + LS   L +  LYVTLEPC MCA A+  +R++R+ YGA + K G        ++    
Sbjct: 87  GKALSNYRLLDTTLYVTLEPCPMCAGALLHSRVKRIVYGAPDLKAGAAGTVLDLFSSQAA 146

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H   +  G+ E+  R  +Q FF+ RR
Sbjct: 147 YHYATVEKGLLEEECRAQLQAFFQRRR 173


>gi|28895070|ref|NP_801420.1| hypothetical protein SPs0158 [Streptococcus pyogenes SSI-1]
 gi|28810315|dbj|BAC63253.1| conserved hypothetical protein [Streptococcus pyogenes SSI-1]
          Length = 160

 Score =  202 bits (515), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 53/142 (37%), Positives = 76/142 (53%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  AL+EA+ +  + EIP+G V V + +II R  N   E      HAE++AI        
Sbjct: 1   MQEALKEAEKSLQKAEIPIGCVIVKDGEIIGRGHNAREESNQAIMHAEMMAINEANAHEG 60

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
              L +  L+VT+EPC MC+ AI LARI  + YGASN K GG ++  Q  T    +H  +
Sbjct: 61  NWRLLDTTLFVTIEPCVMCSGAIGLARIPHVIYGASNQKFGGADSLYQILTDERLNHRVQ 120

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
           +  G+       I+Q FF++ R
Sbjct: 121 VERGLLAADCANIMQTFFRQGR 142


>gi|194335892|ref|YP_002017686.1| CMP/dCMP deaminase zinc-binding [Pelodictyon phaeoclathratiforme
           BU-1]
 gi|194308369|gb|ACF43069.1| CMP/dCMP deaminase zinc-binding [Pelodictyon phaeoclathratiforme
           BU-1]
          Length = 155

 Score =  202 bits (515), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 59/150 (39%), Positives = 80/150 (53%), Gaps = 1/150 (0%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAI 59
           M      M  A  EA  A  R E+PVGAV +  N  +I R  N+   L D TAHAE++A+
Sbjct: 1   MMDFAYCMELAFREAIKAFERKEVPVGAVVLDSNGHVIGRGYNQVEALCDSTAHAEMIAL 60

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
                 L  + L +  L VTLEPC MCA AI  A++ R+ +GA +PK G           
Sbjct: 61  TSAMATLGSKYLNDCTLAVTLEPCPMCAGAIVNAKVGRVIFGAYDPKMGAAGTVMNVTGS 120

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
              +H PE++ GI E + R ++QDFF+E R
Sbjct: 121 RQLNHQPEVFGGIMENKCRNLLQDFFRELR 150


>gi|34540529|ref|NP_905008.1| cytidine/deoxycytidylate deaminase family protein [Porphyromonas
           gingivalis W83]
 gi|188994633|ref|YP_001928885.1| putative cytosine/adenosine deaminase [Porphyromonas gingivalis
           ATCC 33277]
 gi|34396842|gb|AAQ65907.1| cytidine/deoxycytidylate deaminase family protein [Porphyromonas
           gingivalis W83]
 gi|188594313|dbj|BAG33288.1| putative cytosine/adenosine deaminase [Porphyromonas gingivalis
           ATCC 33277]
          Length = 150

 Score =  202 bits (515), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 62/148 (41%), Positives = 82/148 (55%), Gaps = 5/148 (3%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
                +M  ALEEA+ AA   EIP+GAV V   +I++RA NR   L D TAHAE+LAI M
Sbjct: 8   TDDIRYMRIALEEARAAADEGEIPIGAVIVCKGQIVARAHNRVERLNDPTAHAEMLAITM 67

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
               +  + L +  LYVT+EPC MCA A+   +I R+ YGAS PK G      + +T   
Sbjct: 68  AVDAIGGKYLRDCTLYVTVEPCLMCAGALRWTQIPRVVYGASEPKVG-----YRLFTDHA 122

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            H    +  GI    S  +++ FF ERR
Sbjct: 123 LHPKCHVEGGILADESENLMRSFFAERR 150


>gi|317120920|ref|YP_004100923.1| tRNA-adenosine deaminase [Thermaerobacter marianensis DSM 12885]
 gi|315590900|gb|ADU50196.1| tRNA-adenosine deaminase [Thermaerobacter marianensis DSM 12885]
          Length = 207

 Score =  202 bits (515), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 56/128 (43%), Positives = 73/128 (57%)

Query: 22  NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81
            E+PVGAVAV + +II+R  N    L D TAHAEIL +R     L    L  V LYVTLE
Sbjct: 63  GEVPVGAVAVHDGRIIARGHNLRERLGDPTAHAEILVLREAAARLGGWRLEGVTLYVTLE 122

Query: 82  PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141
           PC MCA AI LAR+ RL YGA +PK G   +          +H  E+  G+  + S  ++
Sbjct: 123 PCPMCAGAIVLARVPRLVYGAPDPKAGAAGSLMNLVQHDKLNHRVELRAGVLAEASAALL 182

Query: 142 QDFFKERR 149
           + FF++ R
Sbjct: 183 RGFFRQLR 190


>gi|297581254|ref|ZP_06943178.1| zinc-binding domain-containing protein [Vibrio cholerae RC385]
 gi|297534570|gb|EFH73407.1| zinc-binding domain-containing protein [Vibrio cholerae RC385]
          Length = 193

 Score =  202 bits (515), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 55/147 (37%), Positives = 79/147 (53%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
           +   FM  A+  A  A  + E+PVGAV V + +II+   N +    D TAHAEI  IR  
Sbjct: 27  QDEQFMRRAIALAAQAEAQGEVPVGAVLVRDGEIIAEGWNGSITNHDATAHAEIEVIRKA 86

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
            + LS   L +  LYVTLEPC MCA A+  +R++R+ YGA + K G        ++    
Sbjct: 87  GKALSNYRLLDTTLYVTLEPCPMCAGALLHSRVKRIVYGAPDLKAGAAGTVMDLFSSQAA 146

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H   +  G+ E+  R  +Q FF+ RR
Sbjct: 147 YHYATVEKGLLEEECRAQLQAFFQRRR 173


>gi|193213141|ref|YP_001999094.1| CMP/dCMP deaminase zinc-binding [Chlorobaculum parvum NCIB 8327]
 gi|193086618|gb|ACF11894.1| CMP/dCMP deaminase zinc-binding [Chlorobaculum parvum NCIB 8327]
          Length = 152

 Score =  202 bits (515), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 59/150 (39%), Positives = 80/150 (53%), Gaps = 1/150 (0%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNK-IISRAGNRNRELKDVTAHAEILAI 59
           M   N  M  A  EA  A    E+PVGAV +  N  +I R  N+   L D TAHAE++A+
Sbjct: 1   MSDLNRCMELAFREAIKAYESKEVPVGAVVLDPNGLVIGRGYNQVETLSDATAHAEMIAL 60

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
                 L  + L    L VTLEPC MCA AI L++I R+ +GA +PK G           
Sbjct: 61  TSAMATLDNKYLEGCTLAVTLEPCPMCAGAIVLSKISRVVFGAWDPKMGASGTVLNVTGC 120

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
           +  +H PE+Y GI E ++  ++QDFF+  R
Sbjct: 121 SALNHQPEVYGGIMEHKAESLLQDFFRGLR 150


>gi|312796599|ref|YP_004029521.1| tRNA-specific adenosine deaminase [Burkholderia rhizoxinica HKI
           454]
 gi|312168374|emb|CBW75377.1| tRNA-specific adenosine deaminase (EC 3.5.4.-) [Burkholderia
           rhizoxinica HKI 454]
          Length = 173

 Score =  202 bits (515), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 53/147 (36%), Positives = 80/147 (54%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
           +   FM+ A   A+ A    E+PVGAV V  +++I++  N+     D +AHAE++A+R  
Sbjct: 14  RDLHFMALARAAARRAYAIGEVPVGAVVVRGDEVIAQGFNQPISTHDPSAHAEMVALRAA 73

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
            + LS   +P  +LYVTLEPC MCA AI  ARI R+ +GA +PK G   +    ++    
Sbjct: 74  AQSLSNYRMPGCELYVTLEPCLMCAGAIMHARIARVVFGAHDPKTGACGSVVDVFSQPRL 133

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H   +  G+        +  FF ERR
Sbjct: 134 NHHTSVVGGVLADECSHELSQFFVERR 160


>gi|260654860|ref|ZP_05860348.1| tRNA-specific adenosine deaminase [Jonquetella anthropi E3_33 E1]
 gi|260630362|gb|EEX48556.1| tRNA-specific adenosine deaminase [Jonquetella anthropi E3_33 E1]
          Length = 166

 Score =  202 bits (515), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 53/143 (37%), Positives = 71/143 (49%), Gaps = 1/143 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  AL EA+ A    E+PVGAV V     II R  N    L D TAHAEI+A+R   + L
Sbjct: 2   MEQALCEARRAFAGGEVPVGAVVVDEKGNIIGRGYNLRAALHDPTAHAEIVALREAAQAL 61

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L    L+VTLEPC MCA A+  ARI R+ +G  + + G   +          +H  
Sbjct: 62  GGWNLSGCSLFVTLEPCPMCAGALVQARIARVVFGCRDERAGACGSLYSILRDGRLNHRC 121

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           ++  G+     R ++Q FF   R
Sbjct: 122 DVAEGLMADECRSLLQSFFLAAR 144


>gi|222110787|ref|YP_002553051.1| cmp/dcmp deaminase zinc-binding [Acidovorax ebreus TPSY]
 gi|221730231|gb|ACM33051.1| CMP/dCMP deaminase zinc-binding [Acidovorax ebreus TPSY]
          Length = 361

 Score =  202 bits (515), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 49/146 (33%), Positives = 74/146 (50%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
                +M  A+ +A  A    E+PVGAV V + ++I+   N      D TAHAE+ A+R 
Sbjct: 4   SDDAHWMREAIAQAHAAQQAGEVPVGAVLVRDGQVIATGRNAPIAGHDPTAHAEMAALRA 63

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
           G   LS   L    LYVTLEPC MC+ A+  AR+ R+ YGA++ K G   +    +    
Sbjct: 64  GAAQLSNYRLDGCTLYVTLEPCAMCSGAMLHARLPRVVYGAADAKTGAAGSVVNLFAEPR 123

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKE 147
            +H   +  G+       ++ DFF++
Sbjct: 124 LNHQTAVQGGVLADECGALLSDFFRD 149


>gi|93006499|ref|YP_580936.1| CMP/dCMP deaminase, zinc-binding [Psychrobacter cryohalolentis K5]
 gi|92394177|gb|ABE75452.1| tRNA-adenosine deaminase [Psychrobacter cryohalolentis K5]
          Length = 197

 Score =  202 bits (515), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 58/148 (39%), Positives = 86/148 (58%), Gaps = 1/148 (0%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
           +   +M+ AL+ A+  A + E+PVGAV V N +II +  N      D TAHAEI+A+R  
Sbjct: 39  EDIKWMTEALKLAKQGAEKEEVPVGAVLVHNQQIIGQGFNEPIGRCDATAHAEIVALRDA 98

Query: 63  CRILSQEILP-EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
           C  L+   LP +  LYVTLEPCTMC  A+  AR+ RL Y A  P+ G + +         
Sbjct: 99  CTRLNNYRLPLKTTLYVTLEPCTMCMGAMIHARVDRLVYAAHEPRAGVLGSQMNLAEQPF 158

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H  ++  G+  + S Q+++DFF++RR
Sbjct: 159 YNHRMQVDAGLCREHSSQMLKDFFRQRR 186


>gi|325856324|ref|ZP_08172040.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Prevotella denticola CRIS 18C-A]
 gi|325483508|gb|EGC86480.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Prevotella denticola CRIS 18C-A]
          Length = 144

 Score =  202 bits (515), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 62/149 (41%), Positives = 83/149 (55%), Gaps = 5/149 (3%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           MKK   +M  AL+EA  A    EIPVGAV V  ++II+RA N    L DVTAHAE+ AI 
Sbjct: 1   MKKDLYYMQRALDEAGAAYREGEIPVGAVVVCRDRIIARAHNLTETLNDVTAHAEMQAIT 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
           M    L  + L +  LYVT+EPC MCA AI  A+ RR+ YG  + K G        Y   
Sbjct: 61  MAAGELGGKYLQDCTLYVTVEPCVMCAGAIGWAQFRRIVYGCPDEKRG-----YHLYAPK 115

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             H   ++  G+  +  + +++ FF+ERR
Sbjct: 116 ALHPRADVTYGVMGEECKALMRRFFQERR 144


>gi|319943546|ref|ZP_08017828.1| tRNA-specific adenosine deaminase [Lautropia mirabilis ATCC 51599]
 gi|319743361|gb|EFV95766.1| tRNA-specific adenosine deaminase [Lautropia mirabilis ATCC 51599]
          Length = 206

 Score =  202 bits (514), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 51/142 (35%), Positives = 71/142 (50%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
            +  M  A+++A NA L  E+PVGAV V   ++I+   N      D TAHAEI  +RM  
Sbjct: 21  DHAMMRLAMDQALNAQLHGEVPVGAVLVKAGQVIATGYNHPIGSHDPTAHAEIRTLRMAA 80

Query: 64  RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123
             L    + E  LYVTLEPC MC  A+  ARI R+ +GA +PK G              +
Sbjct: 81  EQLGNYRVGESTLYVTLEPCMMCLGAMLHARISRVVFGAPDPKTGVCGGVLDLPAEGRLN 140

Query: 124 HSPEIYPGISEQRSRQIIQDFF 145
           H   +  G+      +++Q FF
Sbjct: 141 HQTVVQGGLLADECGKLLQRFF 162


>gi|229513031|ref|ZP_04402497.1| tRNA-specific adenosine-34 deaminase [Vibrio cholerae TMA 21]
 gi|254285542|ref|ZP_04960506.1| zinc-binding domain protein [Vibrio cholerae AM-19226]
 gi|150424404|gb|EDN16341.1| zinc-binding domain protein [Vibrio cholerae AM-19226]
 gi|229349924|gb|EEO14878.1| tRNA-specific adenosine-34 deaminase [Vibrio cholerae TMA 21]
          Length = 193

 Score =  202 bits (514), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 55/147 (37%), Positives = 79/147 (53%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
           +   FM  A+  A  A  + E+PVGAV V + +II+   N +    D TAHAEI  IR  
Sbjct: 27  QDEQFMRRAIALAAQAEAQGEVPVGAVLVRDGEIIAEGWNGSITNHDATAHAEIEVIRKA 86

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
            + LS   L +  LYVTLEPC MCA A+  +R++R+ YGA + K G        ++    
Sbjct: 87  GKALSNYRLLDTTLYVTLEPCPMCAGALLHSRVKRIVYGAPDLKAGAAGTVMDLFSSQAA 146

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H   +  G+ E+  R  +Q FF+ RR
Sbjct: 147 YHYATVEKGLLEEECRAQLQAFFQRRR 173


>gi|288926032|ref|ZP_06419961.1| cytidine/deoxycytidylate deaminase family protein [Prevotella
           buccae D17]
 gi|288337252|gb|EFC75609.1| cytidine/deoxycytidylate deaminase family protein [Prevotella
           buccae D17]
          Length = 147

 Score =  202 bits (514), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 62/149 (41%), Positives = 87/149 (58%), Gaps = 5/149 (3%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           ++    +M  AL+EA+ A  + EIP+GAV V   +IISRA N    L DVTAHAE+ AI 
Sbjct: 4   LEVDEQYMRKALQEAEAACQKGEIPIGAVVVCKGRIISRAHNLTETLHDVTAHAEMQAIT 63

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
               +L  + L +  LYVT+EPCTMCA AI  A++ R+ YGA + K G      + Y   
Sbjct: 64  AAADLLGGKYLTDCTLYVTVEPCTMCAGAIGWAQVPRIVYGAPDEKRG-----YRHYAPH 118

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             H   +I  GI E   R+++Q FF+++R
Sbjct: 119 AMHPKADIVGGILEDECRELMQKFFRDKR 147


>gi|121594624|ref|YP_986520.1| CMP/dCMP deaminase [Acidovorax sp. JS42]
 gi|120606704|gb|ABM42444.1| CMP/dCMP deaminase, zinc-binding protein [Acidovorax sp. JS42]
          Length = 361

 Score =  202 bits (514), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 49/146 (33%), Positives = 75/146 (51%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
                +M  A+ +A+ A    E+PVGAV V + ++I+   N      D TAHAE+ A+R 
Sbjct: 4   SDDAHWMREAIAQARAAQQAGEVPVGAVLVRDGQVIATGRNAPIAGHDPTAHAEMAALRA 63

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
           G   LS   L    LYVTLEPC MC+ A+  AR+ R+ YGA++ K G   +    +    
Sbjct: 64  GAAQLSNYRLDGCTLYVTLEPCAMCSGAMLHARLPRVVYGAADAKTGAAGSVVNLFAEPR 123

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKE 147
            +H   +  G+       ++ DFF++
Sbjct: 124 LNHQTAVQGGVLADECGALLSDFFRD 149


>gi|94498766|ref|ZP_01305314.1| CMP/dCMP deaminase, zinc-binding protein [Sphingomonas sp. SKA58]
 gi|94421775|gb|EAT06828.1| CMP/dCMP deaminase, zinc-binding protein [Sphingomonas sp. SKA58]
          Length = 152

 Score =  202 bits (514), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 70/142 (49%), Positives = 89/142 (62%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  ALE A+ A   NE+P+GAV   +  II    NRNR   D TAHAE++A+R     L 
Sbjct: 11  MRRALELARAAQAANEVPIGAVVTRDGVIIGEGENRNRRDCDPTAHAEMVAMRAAAVRLH 70

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
              L   DL+VTLEPC MCA AIS ARI RLYYGA++PKGG IE G + +    C H PE
Sbjct: 71  DFRLTGCDLWVTLEPCPMCAGAISHARIARLYYGAADPKGGAIEQGPRLFMQPQCLHRPE 130

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
           +Y G++E  +  +++DFF  RR
Sbjct: 131 VYAGLAEAEASALLRDFFAARR 152


>gi|307941692|ref|ZP_07657047.1| CMP/dCMP deaminase zinc-binding [Roseibium sp. TrichSKD4]
 gi|307775300|gb|EFO34506.1| CMP/dCMP deaminase zinc-binding [Roseibium sp. TrichSKD4]
          Length = 262

 Score =  202 bits (514), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 75/129 (58%), Positives = 97/129 (75%)

Query: 21  RNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80
           R E+PVGAV V + K++++ GNR  EL D TAHAE+L IR  C  L+ + LPE DLYVTL
Sbjct: 131 RGEVPVGAVLVRDGKVLAKDGNRTLELNDPTAHAEVLVIRAACNTLASQRLPECDLYVTL 190

Query: 81  EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140
           EPC MCA AIS ARIRRLYYGA + KGG +ENGT+F+   TCHH+PE+Y G  EQ S ++
Sbjct: 191 EPCPMCAGAISFARIRRLYYGAGDTKGGAVENGTRFFCQPTCHHAPEVYSGFQEQASAEL 250

Query: 141 IQDFFKERR 149
           ++ FF+++R
Sbjct: 251 LKSFFQKKR 259


>gi|194333451|ref|YP_002015311.1| CMP/dCMP deaminase [Prosthecochloris aestuarii DSM 271]
 gi|194311269|gb|ACF45664.1| CMP/dCMP deaminase zinc-binding [Prosthecochloris aestuarii DSM
           271]
          Length = 154

 Score =  202 bits (514), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 60/145 (41%), Positives = 79/145 (54%), Gaps = 1/145 (0%)

Query: 6   VFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
            FM  A  EA  A  + EIPVGAV    N  I+ R  N+   L D TAHAEI+A+     
Sbjct: 5   YFMEQAFREAIKAYEKKEIPVGAVVFDSNGSIVGRGYNQVEALSDATAHAEIIALTSAMA 64

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
            L  + L +  L VTLEPC MCA AI  A++ RL +GA +PK G              +H
Sbjct: 65  TLGSKYLSDCTLAVTLEPCPMCAGAIVNAKVGRLIFGAYDPKMGACGTVMNITGNRQLNH 124

Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149
            PE+Y GI E +++ ++QDFF+  R
Sbjct: 125 QPEVYGGILEHKAQSLLQDFFRGLR 149


>gi|300742404|ref|ZP_07072425.1| cytidine/deoxycytidylate deaminase family protein [Rothia
           dentocariosa M567]
 gi|300381589|gb|EFJ78151.1| cytidine/deoxycytidylate deaminase family protein [Rothia
           dentocariosa M567]
          Length = 176

 Score =  202 bits (514), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 52/148 (35%), Positives = 72/148 (48%), Gaps = 1/148 (0%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           +   +M  AL+E + AA   EIP+GAV V    +II    N      D T HAEI AIR 
Sbjct: 24  EHERWMRLALDEGKRAACAGEIPIGAVVVNAEGEIIGSGHNSREHDHDPTGHAEIHAIRQ 83

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
             + L    L E  L VT+EPC MCA AI +ARI  +  GA   K G + +         
Sbjct: 84  AAQHLKTWRLEECTLVVTVEPCLMCAGAILMARIPTVVMGAWEEKTGAVGSQYDVLRDRR 143

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
                ++Y G+  +    +++ FF+ RR
Sbjct: 144 LGLDVQVYAGVLREECAGLMRTFFEARR 171


>gi|294635160|ref|ZP_06713669.1| tRNA-specific adenosine deaminase [Edwardsiella tarda ATCC 23685]
 gi|291091465|gb|EFE24026.1| tRNA-specific adenosine deaminase [Edwardsiella tarda ATCC 23685]
          Length = 182

 Score =  202 bits (514), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 59/147 (40%), Positives = 83/147 (56%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
             + +M  AL  A+ A  + E+PVGAV VL++++I    NR     D TAHAEI+A++ G
Sbjct: 15  DDSYWMRRALALAERARAQGEVPVGAVLVLDDQVIGEGWNRPITRHDPTAHAEIMALQQG 74

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
             +L    L E  LYVTLEPC MCA A+  +RIRRL YGAS+ K G   +          
Sbjct: 75  GAVLQNYRLLEATLYVTLEPCVMCAGAMVHSRIRRLVYGASDLKTGAAGSLLDVLGHPGM 134

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H  E+  G+  +     + DFF++RR
Sbjct: 135 NHRIEVCGGVLAEACAAQLSDFFRQRR 161


>gi|126735087|ref|ZP_01750833.1| hypothetical protein RCCS2_14459 [Roseobacter sp. CCS2]
 gi|126715642|gb|EBA12507.1| hypothetical protein RCCS2_14459 [Roseobacter sp. CCS2]
          Length = 148

 Score =  202 bits (514), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 79/147 (53%), Positives = 102/147 (69%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
               +M+ AL+EA+ A  R E+PVGAV V  + ++++AGN+ RE  D TAHAE+LAIR  
Sbjct: 2   DFRTYMNVALDEARVAGARGEVPVGAVIVGPDGVVAQAGNQTRERSDPTAHAEVLAIRAA 61

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
           C  L QE L   DLYVTLEPC MCAAAIS ARI RLYYGA++PK GG+  G + ++ A C
Sbjct: 62  CAALGQERLIRCDLYVTLEPCPMCAAAISNARIARLYYGAADPKSGGVAQGPRVFSHAQC 121

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           HH PE+Y GI  + S  +++DFF  RR
Sbjct: 122 HHVPEVYDGIGAKASEALLKDFFAGRR 148


>gi|117929225|ref|YP_873776.1| tRNA-adenosine deaminase [Acidothermus cellulolyticus 11B]
 gi|117649688|gb|ABK53790.1| tRNA-adenosine deaminase [Acidothermus cellulolyticus 11B]
          Length = 144

 Score =  202 bits (514), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 56/143 (39%), Positives = 77/143 (53%), Gaps = 1/143 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNK-IISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  AL+EA  A    ++PVGA+ +     ++ R  N+     D TAHAEI+A+R     L
Sbjct: 1   MRLALQEAARAEKVADVPVGAIVLGPGGDVLGRGHNQREAAADPTAHAEIVALRAAAWRL 60

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
            +  L    L VTLEPCTMCA AI LAR+ RL YGA +PK G + +          +H P
Sbjct: 61  GRWRLDGCTLVVTLEPCTMCAGAIVLARLDRLVYGAVDPKSGAVGSLWDVVRDRRLNHRP 120

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+  G+      Q+++ FF  RR
Sbjct: 121 EVIAGVLADECGQVLRTFFSGRR 143


>gi|253998683|ref|YP_003050746.1| CMP/dCMP deaminase zinc-binding [Methylovorus sp. SIP3-4]
 gi|253985362|gb|ACT50219.1| CMP/dCMP deaminase zinc-binding [Methylovorus sp. SIP3-4]
          Length = 175

 Score =  202 bits (514), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 61/146 (41%), Positives = 76/146 (52%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
              FM  AL+ AQ AA   E+PVGA+ VL+ KII R  N      D TAHAEI A+R   
Sbjct: 16  DQAFMQQALQLAQAAADAGEVPVGALVVLDGKIIGRGMNAPIGSHDPTAHAEIQAMREAA 75

Query: 64  RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123
             +    L    LYVTLEPC MC+ AI  ARI RL YGA +PK G   +       +  +
Sbjct: 76  AAIGNYRLVGCTLYVTLEPCAMCSGAIQHARIARLVYGARDPKTGSCGSVIDLMAESRLN 135

Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149
           H  E+  GI  +    ++  FF  RR
Sbjct: 136 HHTEVAGGILAEECGSMLSRFFSARR 161


>gi|327312523|ref|YP_004327960.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Prevotella denticola F0289]
 gi|326945985|gb|AEA21870.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Prevotella denticola F0289]
          Length = 144

 Score =  202 bits (514), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 62/149 (41%), Positives = 83/149 (55%), Gaps = 5/149 (3%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           MK+   +M  AL+EA  A    EIPVGAV V  ++II+RA N    L DVTAHAE+ AI 
Sbjct: 1   MKRDLYYMQRALDEAGAAYREGEIPVGAVVVCRDRIIARAHNLTETLNDVTAHAEMQAIT 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
           M    L  + L +  LYVT+EPC MCA AI  A+ RR+ YG  + K G        Y   
Sbjct: 61  MAAGELGGKYLQDCTLYVTVEPCVMCAGAIGWAQFRRIVYGCPDEKRG-----YHLYAPK 115

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             H   ++  G+  +  + ++Q FF+ERR
Sbjct: 116 ALHPRADVTYGVMGEECKALMQRFFQERR 144


>gi|288800754|ref|ZP_06406211.1| cytidine/deoxycytidylate deaminase family protein [Prevotella sp.
           oral taxon 299 str. F0039]
 gi|288332215|gb|EFC70696.1| cytidine/deoxycytidylate deaminase family protein [Prevotella sp.
           oral taxon 299 str. F0039]
          Length = 144

 Score =  202 bits (514), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 67/149 (44%), Positives = 87/149 (58%), Gaps = 5/149 (3%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           MK    FM+ ALE+AQ A    EIPVGAV V  +KII+R+ N    L DVTAHAE+ AI 
Sbjct: 1   MKGDEWFMTKALEQAQLALEAGEIPVGAVVVAKDKIIARSHNLTEMLCDVTAHAEMQAIT 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
            G   L  + L E  LYVTLEPC MCA AI  +++ RL YGAS+ K G        +   
Sbjct: 61  SGTNSLGGKYLNECTLYVTLEPCVMCAGAIGWSQLGRLVYGASDDKRG-----FMRFAPN 115

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             H   ++  G+ E+  + IIQ+FF+ +R
Sbjct: 116 ALHPKTKVTKGVMEEECKTIIQNFFRSKR 144


>gi|226946009|ref|YP_002801082.1| Cytidine/deoxycytidylate deaminase-like protein [Azotobacter
           vinelandii DJ]
 gi|226720936|gb|ACO80107.1| Cytidine/deoxycytidylate deaminase-like protein [Azotobacter
           vinelandii DJ]
          Length = 158

 Score =  202 bits (514), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 56/148 (37%), Positives = 77/148 (52%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
            +   FM  AL  A   A   E+PVGAV V   +I+ R  N     +D +AHAE++AIR 
Sbjct: 10  SQDEHFMREALVLAAEGAGLGEVPVGAVLVRGGEIVGRGFNCPISRRDPSAHAEMVAIRA 69

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
               L    LP   LYVTLEPC+MCA  I  AR+ R+ +GAS P+ G   +   F+    
Sbjct: 70  AAAALDNYRLPGSTLYVTLEPCSMCAGLIVHARVARVVFGASEPRAGVAVSRGDFFAQDF 129

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H   I  G+  +    I++ FF+ RR
Sbjct: 130 LNHRVLIEGGLLAEECGAILKAFFRARR 157


>gi|298491580|ref|YP_003721757.1| CMP/dCMP deaminase zinc-binding protein ['Nostoc azollae' 0708]
 gi|298233498|gb|ADI64634.1| CMP/dCMP deaminase zinc-binding protein ['Nostoc azollae' 0708]
          Length = 165

 Score =  201 bits (513), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 58/148 (39%), Positives = 76/148 (51%), Gaps = 1/148 (0%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRM 61
           K   +M+ ALE AQ A    E+PVGAV V   + +I+   NR    +D T HAEI+AIR 
Sbjct: 16  KHQKWMNHALELAQVAGDAGEVPVGAVIVDAADNLIATGENRKERDQDPTGHAEIMAIRA 75

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
             + L    L +  LYVTLEPC MCA AI  AR+  L YG  + K G I           
Sbjct: 76  ASQSLQNWRLDKYTLYVTLEPCPMCAGAIVHARLATLVYGVDDTKTGAIRTVINIPNSPA 135

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H  ++  GI E   R  +Q +F  +R
Sbjct: 136 SNHPLQVVGGILESACRHQLQTWFTTKR 163


>gi|85717177|ref|ZP_01048135.1| cytidine/deoxycytidylate deaminase, zinc-binding region
           [Nitrobacter sp. Nb-311A]
 gi|85696010|gb|EAQ33910.1| cytidine/deoxycytidylate deaminase, zinc-binding region
           [Nitrobacter sp. Nb-311A]
          Length = 142

 Score =  201 bits (513), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 80/142 (56%), Positives = 100/142 (70%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  ALE A+ A    E+P+G V V + ++I+ AGNR    +D TAHAEILA+R   + L 
Sbjct: 1   MDMALEAAKKAGQAGEVPIGCVIVRDGEVIATAGNRTLTDRDPTAHAEILALRAAAQALG 60

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
            E L   DLYVTLEPCTMCAAAIS ARIRRLYYGAS+PKGG +E+G +F    TCHH PE
Sbjct: 61  SERLTGCDLYVTLEPCTMCAAAISFARIRRLYYGASDPKGGAVESGVRFLAAPTCHHRPE 120

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
           +YP + E R+  +++DFFK RR
Sbjct: 121 VYPSVGESRAAALLRDFFKTRR 142


>gi|115522956|ref|YP_779867.1| CMP/dCMP deaminase, zinc-binding [Rhodopseudomonas palustris
           BisA53]
 gi|115516903|gb|ABJ04887.1| tRNA-adenosine deaminase [Rhodopseudomonas palustris BisA53]
          Length = 148

 Score =  201 bits (513), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 72/129 (55%), Positives = 94/129 (72%)

Query: 21  RNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80
             E+P+G V V + ++I+ A NR    +D TAHAEILAIR     L  E L + DLYVTL
Sbjct: 20  AGEVPIGCVIVRDGEVIATAHNRTLSDRDPTAHAEILAIRQAAASLGSERLVDCDLYVTL 79

Query: 81  EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140
           EPCTMCA AISLARIRRLYYGAS+PKGG +E+G +F+   TCHH+PE+Y  + E+RS  +
Sbjct: 80  EPCTMCAGAISLARIRRLYYGASDPKGGAVESGARFFAQPTCHHAPEVYSAVGERRSATL 139

Query: 141 IQDFFKERR 149
           +++FF+ RR
Sbjct: 140 LREFFQARR 148


>gi|325286553|ref|YP_004262343.1| CMP/dCMP deaminase zinc-binding protein [Cellulophaga lytica DSM
           7489]
 gi|324322007|gb|ADY29472.1| CMP/dCMP deaminase zinc-binding protein [Cellulophaga lytica DSM
           7489]
          Length = 149

 Score =  201 bits (513), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 60/147 (40%), Positives = 84/147 (57%), Gaps = 6/147 (4%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
               FM  ALEEAQ A  + E+PVGAV V+ ++II+RA N   +L DVTAHAE+ AI   
Sbjct: 6   DDTYFMKKALEEAQAAYDKGEVPVGAVIVIKDRIIARAHNLTEQLNDVTAHAEMQAITSA 65

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
              L  + L    LYVTLEPC MCA A+  ++I ++ Y A + K G     T      T 
Sbjct: 66  ANFLGGKYLENCTLYVTLEPCQMCAGALYWSQISKIVYAAKDVKRGFTAMST------TL 119

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           H   +I  G+ E+ + ++++ FF E+R
Sbjct: 120 HPKTKISGGLLEKEASELLKRFFIEKR 146


>gi|310816563|ref|YP_003964527.1| cytidine and deoxycytidylate deaminase family protein
           [Ketogulonicigenium vulgare Y25]
 gi|308755298|gb|ADO43227.1| cytidine and deoxycytidylate deaminase family protein
           [Ketogulonicigenium vulgare Y25]
          Length = 150

 Score =  201 bits (513), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 74/148 (50%), Positives = 101/148 (68%), Gaps = 1/148 (0%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRM 61
           +   +M  ALEEA+ AA+R E+PVGAV +    +II+RAGNR REL D TAHAE+LAIR 
Sbjct: 2   QFRSYMIHALEEAKLAAMRGEVPVGAVVIGPSGQIIARAGNRTRELHDPTAHAEVLAIRA 61

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
            C ++  E L + DLYVTLEPC +CA  I+ ARIRRLY+GA +PK GG+ +G + +    
Sbjct: 62  ACAVIGSERLIDHDLYVTLEPCPICAGTIAAARIRRLYFGAEDPKSGGVLHGARVFNHPQ 121

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
           CHH PE+Y  +    +  +++DFF  +R
Sbjct: 122 CHHRPEVYGDLGAPEAETLLRDFFAAKR 149


>gi|89889508|ref|ZP_01201019.1| cytosine/adenosine deaminase [Flavobacteria bacterium BBFL7]
 gi|89517781|gb|EAS20437.1| cytosine/adenosine deaminase [Flavobacteria bacterium BBFL7]
          Length = 149

 Score =  201 bits (513), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 64/147 (43%), Positives = 82/147 (55%), Gaps = 6/147 (4%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
               FM  AL+EAQ A  R EIPVGAV V  N+II++  N    L DVTAHAE+ AI  G
Sbjct: 6   DHEYFMKKALQEAQTALDRGEIPVGAVIVTQNRIIAKGHNLTETLTDVTAHAEMQAITAG 65

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
              L  + L +  LYVTLEPC MCA A+  ++I  + YGA +   G ++ GTQ       
Sbjct: 66  ASFLGGKYLKDCTLYVTLEPCQMCAGALYWSQISNIVYGARDEHRGYLKMGTQL------ 119

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           H   ++  GI E+    II +FF  RR
Sbjct: 120 HPKTKVVSGILEEECSAIINEFFTRRR 146


>gi|86608124|ref|YP_476886.1| cytidine and deoxycytidylate deaminase family protein
           [Synechococcus sp. JA-2-3B'a(2-13)]
 gi|86556666|gb|ABD01623.1| cytidine and deoxycytidylate deaminase family protein
           [Synechococcus sp. JA-2-3B'a(2-13)]
          Length = 171

 Score =  201 bits (513), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 57/150 (38%), Positives = 84/150 (56%), Gaps = 1/150 (0%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNK-IISRAGNRNRELKDVTAHAEILAI 59
            ++   +M  AL EA+ A    E+PV A+ V   + +++ + NR    +D TAHAEILA+
Sbjct: 13  WQRHRAWMQLALREAEQAGEAGEVPVAALVVGPGEKLLALSSNRRERDRDPTAHAEILAL 72

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
           R   + L    L    LYVTLEPC MCA AIS +R+ ++ YGA +PK G + +       
Sbjct: 73  RQAGQRLGDWQLQGCRLYVTLEPCPMCAGAISQSRLAQVIYGADDPKAGALRSVLNLPAS 132

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
           A   H PE+  G+ E   R+++Q +F  RR
Sbjct: 133 AASFHCPEVIGGVCEAECRRLLQQWFCRRR 162


>gi|158334188|ref|YP_001515360.1| cytidine/deoxycytidylate deaminase region [Acaryochloris marina
           MBIC11017]
 gi|158304429|gb|ABW26046.1| cytidine/deoxycytidylate deaminase, zinc-binding region
           [Acaryochloris marina MBIC11017]
          Length = 165

 Score =  201 bits (513), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 56/148 (37%), Positives = 75/148 (50%), Gaps = 1/148 (0%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           +   +M  A+  A  A    E+PVGAV +  +   I+   NR     D TAHAEI+A+R 
Sbjct: 8   EHQQWMEKAIALATQAGAAGEVPVGAVIIGPDGDCIAEGENRRERDHDPTAHAEIVALRA 67

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
             +++    L E  LYVTLEPC MCA AI  AR+  L YGA +PK G I           
Sbjct: 68  ASQVIQSWRLHECRLYVTLEPCPMCAGAIIQARLGLLVYGAHDPKTGAIRTVLNLPGSPC 127

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
             H   +  G+ E   RQ +Q++F  RR
Sbjct: 128 SFHKLPVIAGVLEPTCRQQLQEWFARRR 155


>gi|120437789|ref|YP_863475.1| cytidine/deoxycytidylate deaminase family protein [Gramella
           forsetii KT0803]
 gi|117579939|emb|CAL68408.1| cytidine/deoxycytidylate deaminase family protein [Gramella
           forsetii KT0803]
          Length = 149

 Score =  201 bits (513), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 58/147 (39%), Positives = 83/147 (56%), Gaps = 6/147 (4%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
               FM  ALEEA++A  + EIPVG V V+N+KII+R  N    L DVTAHAE+ AI   
Sbjct: 6   NDEYFMKKALEEAESAYEKGEIPVGVVVVINDKIIARGHNLTETLNDVTAHAEMQAITAA 65

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
              L  + L    +Y+TLEPC MCA A+  ++I ++ +GA + + G  + G Q       
Sbjct: 66  ANFLGGKYLQNCTMYITLEPCQMCAGALYWSQISKIVFGAEDSQRGYRKFGVQL------ 119

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           H   E+  GI  + +  I++ FF E+R
Sbjct: 120 HPKTEVKSGIMAEEASSILKRFFIEKR 146


>gi|326693434|ref|ZP_08230439.1| hypothetical protein LargK3_06881 [Leuconostoc argentinum KCTC
           3773]
          Length = 169

 Score =  201 bits (513), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 58/145 (40%), Positives = 80/145 (55%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           + FM  AL EA+ AA   E+P+GAV V +N+I++RA N     +  TAHAE+LAI     
Sbjct: 13  DYFMQVALNEAKLAATEGEVPIGAVIVKDNQIVARAHNHREAHQLATAHAELLAIEAAND 72

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
            L    L    L+VTLEPC MCA AI  AR+  +YYGA + KGG   +  Q       +H
Sbjct: 73  ALQSWRLENTALFVTLEPCIMCAGAIINARVPVVYYGADDAKGGATRSLYQLLEDERLNH 132

Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149
              ++P +       ++QDFF + R
Sbjct: 133 RVVVHPQVRGDEGGALLQDFFGQIR 157


>gi|261380282|ref|ZP_05984855.1| tRNA-specific adenosine deaminase [Neisseria subflava NJ9703]
 gi|284796794|gb|EFC52141.1| tRNA-specific adenosine deaminase [Neisseria subflava NJ9703]
          Length = 240

 Score =  201 bits (513), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 50/148 (33%), Positives = 79/148 (53%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
                FM  A+E+A+ +A+  E+PVGAV V   + I+   N      +V+ HAEI A+  
Sbjct: 90  SDMETFMRLAIEQAKQSAVLGEVPVGAVIVYQGEAIAATHNTCIGDHNVSHHAEINALAA 149

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
             + L    L + D+Y+TLEPC+MCA+A+  AR+ R+ YGA+  K G   +    +    
Sbjct: 150 AGKTLQNYRLEDCDVYITLEPCSMCASALIQARVGRVIYGAAEAKTGAAGSVVDLFADKR 209

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +    I  GI  +  + ++QDFF  +R
Sbjct: 210 LNKHTAILGGILAEECQSVLQDFFAAKR 237


>gi|315606353|ref|ZP_07881369.1| tRNA-specific adenosine deaminase [Prevotella buccae ATCC 33574]
 gi|315252044|gb|EFU32017.1| tRNA-specific adenosine deaminase [Prevotella buccae ATCC 33574]
          Length = 147

 Score =  201 bits (513), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 62/149 (41%), Positives = 87/149 (58%), Gaps = 5/149 (3%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           ++    +M  AL+EA+ A  + EIP+GAV V   +IISRA N    L DVTAHAE+ AI 
Sbjct: 4   LEIDEQYMRKALQEAEAACQKGEIPIGAVVVCKGRIISRAHNLTETLHDVTAHAEMQAIT 63

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
               +L  + L +  LYVT+EPCTMCA AI  A++ R+ YGA + K G      + Y   
Sbjct: 64  AAADLLGGKYLTDCTLYVTVEPCTMCAGAIGWAQVPRIVYGAPDEKRG-----YRHYAPH 118

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             H   +I  GI E   R+++Q FF+++R
Sbjct: 119 AMHPRADIVGGILEDECRELMQKFFRDKR 147


>gi|23466072|ref|NP_696675.1| cytidine and deoxycytidylate deaminase [Bifidobacterium longum
           NCC2705]
 gi|213693307|ref|YP_002323893.1| CMP/dCMP deaminase, zinc-binding [Bifidobacterium longum subsp.
           infantis ATCC 15697]
 gi|23326799|gb|AAN25311.1| possible cytidine and deoxycytidylate deaminase [Bifidobacterium
           longum NCC2705]
 gi|213524768|gb|ACJ53515.1| CMP/dCMP deaminase, zinc-binding [Bifidobacterium longum subsp.
           infantis ATCC 15697]
          Length = 158

 Score =  201 bits (513), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 55/150 (36%), Positives = 75/150 (50%), Gaps = 2/150 (1%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAI 59
           M+     M  ALE A  AA   ++PVGAV +    +I+ R  N      D  AHAEI+A+
Sbjct: 10  MEYDEA-MRRALELAGQAAAAGDVPVGAVVLDAAGQIVGRGYNTREADGDPLAHAEIIAM 68

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
           R   + L    L +  L VTLEPC MCA A     I  + +GA +PK G   +       
Sbjct: 69  RQAAQALGAWNLADCTLAVTLEPCPMCAGACIQTHIGTIAFGAWDPKLGACGSIWDIPRD 128

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
               HSPE++ G+ E   + I+ DFF +RR
Sbjct: 129 PHIGHSPEVHGGVLEGECQSILTDFFAQRR 158


>gi|46190701|ref|ZP_00121128.2| COG0590: Cytosine/adenosine deaminases [Bifidobacterium longum
           DJO10A]
 gi|189440344|ref|YP_001955425.1| cytosine/adenosine deaminase [Bifidobacterium longum DJO10A]
 gi|239622901|ref|ZP_04665932.1| conserved hypothetical protein [Bifidobacterium longum subsp.
           infantis CCUG 52486]
 gi|312133678|ref|YP_004001017.1| cumb [Bifidobacterium longum subsp. longum BBMN68]
 gi|317482318|ref|ZP_07941338.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Bifidobacterium sp. 12_1_47BFAA]
 gi|189428779|gb|ACD98927.1| Cytosine/adenosine deaminase [Bifidobacterium longum DJO10A]
 gi|239514898|gb|EEQ54765.1| conserved hypothetical protein [Bifidobacterium longum subsp.
           infantis CCUG 52486]
 gi|291517778|emb|CBK71394.1| tRNA-adenosine deaminase [Bifidobacterium longum subsp. longum F8]
 gi|311772943|gb|ADQ02431.1| CumB [Bifidobacterium longum subsp. longum BBMN68]
 gi|316916198|gb|EFV37600.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Bifidobacterium sp. 12_1_47BFAA]
 gi|320459488|dbj|BAJ70109.1| putative cytidine/deoxycytidine deaminase [Bifidobacterium longum
           subsp. infantis ATCC 15697]
          Length = 149

 Score =  201 bits (513), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 55/150 (36%), Positives = 75/150 (50%), Gaps = 2/150 (1%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAI 59
           M+     M  ALE A  AA   ++PVGAV +    +I+ R  N      D  AHAEI+A+
Sbjct: 1   MEYDEA-MRRALELAGQAAAAGDVPVGAVVLDAAGQIVGRGYNTREADGDPLAHAEIIAM 59

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
           R   + L    L +  L VTLEPC MCA A     I  + +GA +PK G   +       
Sbjct: 60  RQAAQALGAWNLADCTLAVTLEPCPMCAGACIQTHIGTIAFGAWDPKLGACGSIWDIPRD 119

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
               HSPE++ G+ E   + I+ DFF +RR
Sbjct: 120 PHIGHSPEVHGGVLEGECQSILTDFFAQRR 149


>gi|326796823|ref|YP_004314643.1| CMP/dCMP deaminase zinc-binding protein [Marinomonas mediterranea
           MMB-1]
 gi|326547587|gb|ADZ92807.1| CMP/dCMP deaminase zinc-binding protein [Marinomonas mediterranea
           MMB-1]
          Length = 159

 Score =  201 bits (512), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 67/146 (45%), Positives = 88/146 (60%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
            N +M  AL  A+ AA  +EIPVGA+ V N++II R  NR     D TAHAEI AIR  C
Sbjct: 3   DNDWMKAALALAEEAAQESEIPVGAIVVQNDEIIGRGFNRPITTCDPTAHAEIQAIRDAC 62

Query: 64  RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123
             ++   LP   LYVTLEPC+MCA AI  ARI ++ YGA+ PK G  E+  +F+  A  +
Sbjct: 63  ANVNNYRLPGATLYVTLEPCSMCAGAIVHARIEKVVYGATEPKSGVTESQGRFFEQAFLN 122

Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149
           H  E+  G+  + + Q +  FFK RR
Sbjct: 123 HKVEVVGGVLAEEASQQLTAFFKFRR 148


>gi|91206241|ref|YP_538596.1| cytosine deaminase [Rickettsia bellii RML369-C]
 gi|157827858|ref|YP_001496922.1| cytosine deaminase [Rickettsia bellii OSU 85-389]
 gi|91069785|gb|ABE05507.1| Cytosine deaminase [Rickettsia bellii RML369-C]
 gi|157803162|gb|ABV79885.1| Cytosine deaminase [Rickettsia bellii OSU 85-389]
          Length = 152

 Score =  201 bits (512), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 71/151 (47%), Positives = 100/151 (66%), Gaps = 2/151 (1%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVL--NNKIISRAGNRNRELKDVTAHAEILA 58
           M   N FM  AL++A+ A  +NE+PVGAV V   N KIIS++ N   E  +   HAEI+A
Sbjct: 1   MNFDNFFMREALKQAEIAFSKNEVPVGAVIVDRENQKIISKSYNNTEEKNNALYHAEIIA 60

Query: 59  IRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
           I   CRI+S + L + D+YVTLEPC MCAAAI+ +R++RL+YGAS+ K G +E+  +++ 
Sbjct: 61  INEACRIISSKNLSDYDIYVTLEPCAMCAAAIAHSRLKRLFYGASDSKHGAVESNLRYFN 120

Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
              C H PEIY GI  + S  +++ FFK+ R
Sbjct: 121 SKACFHRPEIYSGIFAEDSALLMKGFFKKIR 151


>gi|78186386|ref|YP_374429.1| cytosine deaminase, putative [Chlorobium luteolum DSM 273]
 gi|78166288|gb|ABB23386.1| tRNA-adenosine deaminase [Chlorobium luteolum DSM 273]
          Length = 153

 Score =  201 bits (512), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 57/148 (38%), Positives = 82/148 (55%), Gaps = 1/148 (0%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRM 61
               FM  A  EA+ A    E+PVGAV +  ++ ++ R  N+   L D TAHAEI+A+  
Sbjct: 2   DFTYFMELAFREARKAFEAGEVPVGAVVLDASSHVVGRGYNQVETLSDATAHAEIIALTA 61

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
               L  + L +  L VTLEPC MCA AI  A++ R+ +GA +PK G   +         
Sbjct: 62  AMATLGNKYLNDCTLVVTLEPCPMCAGAIVNAKVGRVVFGAYDPKMGAAGSVLNVTGCRA 121

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H PE++ GI E R++ ++QDFF E R
Sbjct: 122 LNHQPEVFGGIMEARAQGLLQDFFAELR 149


>gi|159028687|emb|CAO88158.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
          Length = 143

 Score =  201 bits (512), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 58/143 (40%), Positives = 78/143 (54%), Gaps = 1/143 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  AL  A  A  R ++PVGAV V     +I++  N   +  D TAHAEILAIR   ++L
Sbjct: 1   MQLALNLAATAGDRGDVPVGAVIVDKQGHLIAQGANCKEKHHDPTAHAEILAIRAASQVL 60

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L    LYVTLEPC MCA AI  AR+  L YGA +PK G I     F      +H  
Sbjct: 61  GNWHLNGCTLYVTLEPCPMCAGAIIQARLGLLVYGADDPKTGVIRTVANFMDSPFSNHRL 120

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
            +  GI  + S +++Q +F+++R
Sbjct: 121 PVIAGILAKESGELLQTWFEKKR 143


>gi|118595115|ref|ZP_01552462.1| Cytidine/deoxycytidylate deaminase, zinc-binding region
           [Methylophilales bacterium HTCC2181]
 gi|118440893|gb|EAV47520.1| Cytidine/deoxycytidylate deaminase, zinc-binding region
           [Methylophilales bacterium HTCC2181]
          Length = 149

 Score =  201 bits (512), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 61/142 (42%), Positives = 81/142 (57%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  AL  A+ A   +E+PVGAV V +N II R  N   +  D T HAE+ AIR   R + 
Sbjct: 1   MQEALAMAKIAYANHEVPVGAVIVNDNIIIGRGCNELIQKNDPTGHAEMHAIREAARTIK 60

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
              L   D+YVTLEPC MC  AI  +RI+ L++GA + K G  E+     +  T +H   
Sbjct: 61  NYRLTNCDIYVTLEPCPMCIGAIFNSRIKNLFFGAYDHKTGVCESVVNLGSFKTLNHHCN 120

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
           I+ GI E  S+ I+Q FF+ERR
Sbjct: 121 IFGGILENESKNILQKFFRERR 142


>gi|325954716|ref|YP_004238376.1| CMP/dCMP deaminase zinc-binding protein [Weeksella virosa DSM
           16922]
 gi|323437334|gb|ADX67798.1| CMP/dCMP deaminase zinc-binding protein [Weeksella virosa DSM
           16922]
          Length = 146

 Score =  201 bits (512), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 62/147 (42%), Positives = 83/147 (56%), Gaps = 6/147 (4%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
               FM  AL+EAQ A  R+EIPVGA+ V  NKII++  N    L DVTAHAE+ AI   
Sbjct: 6   SDEYFMRKALQEAQVAFDRDEIPVGALIVSQNKIIAKTHNLTETLTDVTAHAEMQAITSA 65

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
              L  + L +  LYVTLEPC MCA A+  ++I R+  GAS+ K G      +       
Sbjct: 66  ANYLGGKYLKDCTLYVTLEPCVMCAGALYWSQISRIVIGASDEKRGFRSQLVKL------ 119

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           H   +I  G+  + S ++IQ FFK++R
Sbjct: 120 HPKTQITEGVLAKESTELIQKFFKDKR 146


>gi|326560079|gb|EGE10469.1| tRNA-specific adenosine deaminase [Moraxella catarrhalis 46P47B1]
 gi|326561665|gb|EGE12002.1| tRNA-specific adenosine deaminase [Moraxella catarrhalis 103P14B1]
 gi|326565806|gb|EGE15968.1| tRNA-specific adenosine deaminase [Moraxella catarrhalis BC1]
 gi|326570459|gb|EGE20499.1| tRNA-specific adenosine deaminase [Moraxella catarrhalis BC8]
 gi|326573436|gb|EGE23404.1| tRNA-specific adenosine deaminase [Moraxella catarrhalis 101P30B1]
          Length = 181

 Score =  201 bits (512), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 58/148 (39%), Positives = 81/148 (54%), Gaps = 1/148 (0%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
           +    M+ ALE A+  A   EIPVGAV V   +I+    N     +D TAHAEI+A+R  
Sbjct: 24  RDVEMMNRALEIAKQGAKFGEIPVGAVVVYEGRILGEGYNCPITTQDPTAHAEIVAVRRA 83

Query: 63  CRILSQEILP-EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
           C  L+   LP    LYVTLEPCTMC  A+  ARI R+ +GA  PK G + +  +      
Sbjct: 84  CETLNNYRLPKGCILYVTLEPCTMCFGALIHARISRVVFGAFEPKAGVVVSQLKLPEQVF 143

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H   +Y G+   +S  ++  FF++RR
Sbjct: 144 YNHHLSVYGGLLADKSSALLSGFFRQRR 171


>gi|104783359|ref|YP_609857.1| cytidine/deoxycytidylate deaminase [Pseudomonas entomophila L48]
 gi|95112346|emb|CAK17073.1| putative cytidine/deoxycytidylate deaminase [Pseudomonas
           entomophila L48]
          Length = 145

 Score =  201 bits (512), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 58/142 (40%), Positives = 80/142 (56%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  ALE A   A   E+PVGAV V + ++I +  NR     D +AHAE++AIR   +  S
Sbjct: 1   MRLALELAAQGAALGEVPVGAVLVQHGQVIGQGFNRPIIDSDPSAHAEMVAIRAAAKSAS 60

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
              LP   LYVTLEPC+MCA  I  +R+ R+ YGA  PK G +++  QF++    +H   
Sbjct: 61  NYRLPGSTLYVTLEPCSMCAGLIVHSRVARVVYGALEPKAGIVQSQGQFFSQGFLNHRVM 120

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
              G+  Q    I+ +FFK RR
Sbjct: 121 FEGGVLAQECGAILSEFFKARR 142


>gi|304311855|ref|YP_003811453.1| Cytidine/deoxycytidylate deaminase, zinc-binding protein [gamma
           proteobacterium HdN1]
 gi|301797588|emb|CBL45809.1| Cytidine/deoxycytidylate deaminase, zinc-binding protein [gamma
           proteobacterium HdN1]
          Length = 171

 Score =  201 bits (512), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 54/147 (36%), Positives = 76/147 (51%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
           +   +M  AL  A+  A   E+PVGAV V + + I    N      D TAHAEI A+R  
Sbjct: 18  EDRRWMERALALARQGAEAGEVPVGAVVVRDGEAIGEGFNCPIGTHDPTAHAEICALRAA 77

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
            R +    L    LYV+LEPC MCA AI  ARI R+ Y A  PK G + +   F+     
Sbjct: 78  GRAIENYRLAGATLYVSLEPCAMCAGAIVHARIDRVVYAAMEPKAGAVASTQNFFEQPQL 137

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           ++  +   G+  Q + + ++ FFK+RR
Sbjct: 138 NYRVKAEGGLLNQEAGEQLRTFFKDRR 164


>gi|119775487|ref|YP_928227.1| cytidine/deoxycytidylate deaminase family protein [Shewanella
           amazonensis SB2B]
 gi|119767987|gb|ABM00558.1| tRNA-adenosine deaminase [Shewanella amazonensis SB2B]
          Length = 190

 Score =  201 bits (512), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 55/146 (37%), Positives = 77/146 (52%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
              FMS ALE A+ A  R E+PVGAV V    +I+   N N  L D +AHAE+  +R   
Sbjct: 27  DKHFMSLALEAAKEAEARGEVPVGAVLVREGLVIATGYNHNIGLNDPSAHAEMQCLREAG 86

Query: 64  RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123
           R+L    L +  LYVTLEPC MCA  +  +RI RL +GA + K G   +          +
Sbjct: 87  RMLGNYRLLDTTLYVTLEPCAMCAGVMVHSRIERLVFGAKDEKTGAAGSVVDLVRHPAFN 146

Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149
           H  ++  G+  +    ++ DFF+ RR
Sbjct: 147 HQIQVEEGVLAEECSGMLSDFFRRRR 172


>gi|119485470|ref|ZP_01619798.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [Lyngbya
           sp. PCC 8106]
 gi|119457226|gb|EAW38352.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [Lyngbya
           sp. PCC 8106]
          Length = 161

 Score =  201 bits (512), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 60/149 (40%), Positives = 79/149 (53%), Gaps = 1/149 (0%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIR 60
                +M  ALE A++A    E+PVGAV +    ++++ A NR     D TAHAEIL +R
Sbjct: 5   TTHCHWMKRALELARSAGEAGEVPVGAVIINPQGQLLAEAENRRERDNDPTAHAEILVLR 64

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              + L    L +  LYVTLEPC MCA AI  ARI+ L YG  +PK G I         A
Sbjct: 65  QAGQKLKDWHLNQCTLYVTLEPCPMCAGAIVQARIQLLVYGVDDPKTGTIRTVANIPDSA 124

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
              H  ++  GI E   RQ +Q +F +RR
Sbjct: 125 YSFHRLQVLGGILESACRQQLQSWFAQRR 153


>gi|51891149|ref|YP_073840.1| putative Cu-binding protein [Symbiobacterium thermophilum IAM
           14863]
 gi|51854838|dbj|BAD38996.1| putative Cu-binding protein [Symbiobacterium thermophilum IAM
           14863]
          Length = 152

 Score =  200 bits (511), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 58/147 (39%), Positives = 83/147 (56%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
               FM  AL EA+ AA   E+P+GAV V +++I+ R  N      D TAHAE+LAIR  
Sbjct: 2   TDEAFMRAALAEAEKAARLGEVPIGAVIVRDSEILVRTHNLRETTHDATAHAEVLAIREA 61

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
            R+L    L    LYVT+EPC MCA A+  +RI R+ +GA +PK     +  +F      
Sbjct: 62  GRLLGGWRLTGCTLYVTIEPCPMCAGALLQSRIDRVVFGARDPKAWADRSILEFLQNPGL 121

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H  E+  G+  +   ++I+ FF+ERR
Sbjct: 122 NHRVEVRDGVLAEACSEVIRQFFRERR 148


>gi|291614449|ref|YP_003524606.1| CMP/dCMP deaminase zinc-binding protein [Sideroxydans
           lithotrophicus ES-1]
 gi|291584561|gb|ADE12219.1| CMP/dCMP deaminase zinc-binding protein [Sideroxydans
           lithotrophicus ES-1]
          Length = 148

 Score =  200 bits (511), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 52/142 (36%), Positives = 76/142 (53%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  AL+ A+ AA   E+PVGAV V +  II    N      D +AHAEI A+R   + + 
Sbjct: 1   MRAALDLARQAAQAGEVPVGAVVVRDGLIIGHGCNAPISRHDPSAHAEIAALRDAAQHIG 60

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
              L + +L+VTLEPC MC  A+  ARI R+ +GA +PK G   +    +     +H   
Sbjct: 61  NYRLVDCELFVTLEPCVMCVGAMFHARIARVVFGAQDPKTGAAGSVFNLFNETRLNHHAR 120

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
           I+ G+  +   +++ DFF  RR
Sbjct: 121 IHGGVLAEECGKVLSDFFAMRR 142


>gi|237756081|ref|ZP_04584658.1| tRNA-specific adenosine deaminase [Sulfurihydrogenibium
           yellowstonense SS-5]
 gi|237691753|gb|EEP60784.1| tRNA-specific adenosine deaminase [Sulfurihydrogenibium
           yellowstonense SS-5]
          Length = 149

 Score =  200 bits (511), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 54/149 (36%), Positives = 85/149 (57%), Gaps = 1/149 (0%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M     F+  A++EA+ A  +NE+PVGA+ V + KIIS+A N+     +   HAEILAI 
Sbjct: 1   MNYHKKFIDQAVKEAEKALKKNEVPVGAIIVKDGKIISKAHNQRISKNNALYHAEILAIE 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
             C+ L    L +  LY TLEPC MC  A+  ARI+++ + A + KGG + +    +   
Sbjct: 61  KACKKLKTWRLDDAVLYTTLEPCLMCTGAVMQARIKKVVFCAKDEKGGAVLSKYTVFDDK 120

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
               + E Y  I ++R  +++++FFK+ R
Sbjct: 121 KLPFNVE-YEYIPDERCSKLLKEFFKKLR 148


>gi|294055423|ref|YP_003549081.1| CMP/dCMP deaminase zinc-binding protein [Coraliomargarita
           akajimensis DSM 45221]
 gi|293614756|gb|ADE54911.1| CMP/dCMP deaminase zinc-binding protein [Coraliomargarita
           akajimensis DSM 45221]
          Length = 181

 Score =  200 bits (511), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 56/148 (37%), Positives = 82/148 (55%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           +  + FM+ A  EA  A  ++E+P+GAV     +II+ A N++R   D TAHAEILAI  
Sbjct: 17  RNEDYFMAHAFNEAIEAWKKDEVPIGAVIEYEGRIIASAHNQSRSTNDPTAHAEILAISQ 76

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
               L    L E  LYVT EPC MC+ A+ +ARI ++YYG  + K G +        L  
Sbjct: 77  AANTLGDWRLNECRLYVTKEPCPMCSGALVIARIGKVYYGLPDEKMGCVGGAVDLGALPR 136

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H  E   G+ E  +  I++ FF+++R
Sbjct: 137 SNHHFESIGGVMEDANHAILKAFFEKKR 164


>gi|28377565|ref|NP_784457.1| cytosine/adenosine deaminase [Lactobacillus plantarum WCFS1]
 gi|254555738|ref|YP_003062155.1| cytosine/adenosine deaminase [Lactobacillus plantarum JDM1]
 gi|300769759|ref|ZP_07079641.1| possible guanine deaminase [Lactobacillus plantarum subsp.
           plantarum ATCC 14917]
 gi|28270397|emb|CAD63300.1| cytosine/adenosine deaminase [Lactobacillus plantarum WCFS1]
 gi|254044665|gb|ACT61458.1| cytosine/adenosine deaminase [Lactobacillus plantarum JDM1]
 gi|300492667|gb|EFK27853.1| possible guanine deaminase [Lactobacillus plantarum subsp.
           plantarum ATCC 14917]
          Length = 168

 Score =  200 bits (511), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 54/142 (38%), Positives = 80/142 (56%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
             +M  AL EA+ A L  E+P+GAV V   +II R  N     +D T HAEI+AI+  C 
Sbjct: 7   EDWMQEALHEARMAYLIGEVPIGAVIVHQGEIIGRGHNLREHGQDATMHAEIIAIQEACE 66

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
            L    L +  LYVTLEPC MC+ AI  AR+  LY+GA +PK G + +  Q       +H
Sbjct: 67  YLHSWRLADCQLYVTLEPCLMCSGAIINARLPELYFGARDPKAGAVRSLYQVMDDTRLNH 126

Query: 125 SPEIYPGISEQRSRQIIQDFFK 146
              ++  I  + + +++++FF+
Sbjct: 127 QVTVHERILARPAGEMLENFFR 148


>gi|322692072|ref|YP_004221642.1| cytidine/deoxycytidine deaminase [Bifidobacterium longum subsp.
           longum JCM 1217]
 gi|320456928|dbj|BAJ67550.1| putative cytidine/deoxycytidine deaminase [Bifidobacterium longum
           subsp. longum JCM 1217]
          Length = 149

 Score =  200 bits (511), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 56/150 (37%), Positives = 76/150 (50%), Gaps = 2/150 (1%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAI 59
           M+     M CALE A  AA   ++PVGAV +    +I+ R  N      D  AHAEI+A+
Sbjct: 1   MEYDEA-MRCALELAGQAAAAGDVPVGAVVLDAAGQIVGRGYNTREADGDPLAHAEIIAM 59

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
           R   + L    L +  L VTLEPC MCA A     I  + +GA +PK G   +       
Sbjct: 60  RQAAQALGAWNLADCTLAVTLEPCPMCAGACIQTHIGTIAFGAWDPKLGACGSIWDIPRD 119

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
               HSPE++ G+ E   + I+ DFF +RR
Sbjct: 120 PHIGHSPEVHGGVLEGECQSILTDFFAQRR 149


>gi|225849713|ref|YP_002729947.1| tRNA-specific adenosine deaminase [Persephonella marina EX-H1]
 gi|225645628|gb|ACO03814.1| tRNA-specific adenosine deaminase [Persephonella marina EX-H1]
          Length = 154

 Score =  200 bits (511), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 52/149 (34%), Positives = 83/149 (55%), Gaps = 1/149 (0%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M +   F+  A EEA  A  ++E+P+GAV V + +II +  N+  E  +   HAEI+AI 
Sbjct: 1   MSEDIKFLDIAYEEALKAYEKDEVPIGAVIVKDGEIIGKGHNQRIEKNNALYHAEIVAIE 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
             CR      L    LYVT+EPC MCA AI  +RI+++ +GA + KGG + +  + +   
Sbjct: 61  EACRNTGSWRLDGCTLYVTVEPCVMCAGAIMQSRIKKVVFGALDQKGGAVVSKYRLFDDG 120

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
                 + Y  I+ +++  I++DFF  +R
Sbjct: 121 KLPFKVD-YSLINYEKASIILKDFFLNKR 148


>gi|167755137|ref|ZP_02427264.1| hypothetical protein CLORAM_00641 [Clostridium ramosum DSM 1402]
 gi|167705187|gb|EDS19766.1| hypothetical protein CLORAM_00641 [Clostridium ramosum DSM 1402]
          Length = 177

 Score =  200 bits (511), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 58/149 (38%), Positives = 82/149 (55%), Gaps = 2/149 (1%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M +   FM  A +EA      +E+PVGAV V + KII+   N     K  TAHAEI+AI 
Sbjct: 26  MDQDLEFMEIAYQEALKCLDMDEVPVGAVIVKDGKIIACGRNLRETSKRATAHAEIIAIE 85

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
             CR L+   L E  LYVTLEPC MC+ AI  +RI+R+ +GA   +   +    Q  +  
Sbjct: 86  EACRTLNSWYLDECTLYVTLEPCVMCSGAIINSRIQRVVFGAFESRWLALTTIYQ--SDI 143

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H P I  G+   +  ++I+D+FK +R
Sbjct: 144 PVNHQPVIVSGVLGDKCSKVIKDYFKNKR 172


>gi|326564207|gb|EGE14443.1| tRNA-specific adenosine deaminase [Moraxella catarrhalis 12P80B1]
          Length = 184

 Score =  200 bits (511), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 58/148 (39%), Positives = 81/148 (54%), Gaps = 1/148 (0%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
           +    M+ ALE A+  A   EIPVGAV V   +I+    N     +D TAHAEI+A+R  
Sbjct: 27  RDVEMMNHALEIAKQGAKFGEIPVGAVVVYEGRILGEGYNCPITTQDPTAHAEIVAVRRA 86

Query: 63  CRILSQEILP-EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
           C  L+   LP    LYVTLEPCTMC  A+  ARI R+ +GA  PK G + +  +      
Sbjct: 87  CETLNNYRLPKGCILYVTLEPCTMCFGALIHARISRVVFGAFEPKAGVVVSQLKLPEQVF 146

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H   +Y G+   +S  ++  FF++RR
Sbjct: 147 YNHHLSVYGGLLADKSSALLSGFFRQRR 174


>gi|53802428|ref|YP_112823.1| zinc-binding domain-containing protein [Methylococcus capsulatus
           str. Bath]
 gi|53756189|gb|AAU90480.1| zinc-binding domain protein [Methylococcus capsulatus str. Bath]
          Length = 137

 Score =  200 bits (511), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 51/136 (37%), Positives = 75/136 (55%)

Query: 14  EAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPE 73
            A+ A    E+P+GAV V N +I+    N+     D TAHAEI+A+R     L    L +
Sbjct: 2   LARTAETAGEVPIGAVLVKNGEILGEGHNQPISTHDPTAHAEIVALRAAGARLGNYRLVD 61

Query: 74  VDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGIS 133
             LYVTLEPC MC  AI  AR+ RL +GA++P+ G   +  +       +H  E+  G+ 
Sbjct: 62  TTLYVTLEPCAMCMGAILHARVGRLVFGAADPRRGAAISALRLNEAEFMNHRVELLEGVL 121

Query: 134 EQRSRQIIQDFFKERR 149
            +   Q+++DFF+ RR
Sbjct: 122 AEECSQLLRDFFRNRR 137


>gi|229523332|ref|ZP_04412739.1| tRNA-specific adenosine-34 deaminase [Vibrio cholerae TM 11079-80]
 gi|229339695|gb|EEO04710.1| tRNA-specific adenosine-34 deaminase [Vibrio cholerae TM 11079-80]
          Length = 177

 Score =  200 bits (511), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 55/147 (37%), Positives = 79/147 (53%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
           +   FM  A+  A  A  + E+PVGAV V + +II+   N +    D TAHAEI  IR  
Sbjct: 11  QDEQFMRRAIALAAQAEAQGEVPVGAVLVRDGEIIAEGWNGSITNHDATAHAEIEVIRKA 70

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
            + LS   L +  LYVTLEPC MCA A+  +R++R+ YGA + K G        ++    
Sbjct: 71  GKALSNYRLLDTTLYVTLEPCPMCAGALLHSRVKRIVYGAPDLKAGAAGTVLDLFSSQAA 130

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H   +  G+ E+  R  +Q FF+ RR
Sbjct: 131 YHYATVEKGLLEEECRAQLQAFFQRRR 157


>gi|313885505|ref|ZP_07819255.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Eremococcus coleocola ACS-139-V-Col8]
 gi|312619235|gb|EFR30674.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Eremococcus coleocola ACS-139-V-Col8]
          Length = 175

 Score =  200 bits (510), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 51/146 (34%), Positives = 73/146 (50%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
              +M  AL+EA  A + +E+P+GAV V   +I+ R  N     +    HAE++AI    
Sbjct: 15  HETWMQEALKEADKALVLDEVPIGAVLVYQGQIVGRGHNVRESQERALGHAELMAIETAN 74

Query: 64  RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123
           + L    L E  LYVTLEPC MCA A+   RI+ + YGAS+ K G              +
Sbjct: 75  QQLGHWRLEEASLYVTLEPCPMCAGALMNCRIKEVIYGASDLKAGCAGTLMNLLEEDRFN 134

Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149
           H  ++  G+ EQ     +  FFK+ R
Sbjct: 135 HRAQVIQGVLEQECSHKLSQFFKDLR 160


>gi|16330356|ref|NP_441084.1| hypothetical protein sll1631 [Synechocystis sp. PCC 6803]
 gi|1652846|dbj|BAA17764.1| sll1631 [Synechocystis sp. PCC 6803]
          Length = 164

 Score =  200 bits (510), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 55/148 (37%), Positives = 81/148 (54%), Gaps = 1/148 (0%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRM 61
               +M  A+  A+ A    EIPVGAV V    ++++   NR +  ++  AHAE+LAI+ 
Sbjct: 7   THEDWMQMAIALAEEAGNVGEIPVGAVVVNAMGEVLATGQNRKQRDQNPIAHAEMLAIQT 66

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
            CR L    L E  LYVTLEPC MC  AI  AR+  L YG  +PK G I++       A 
Sbjct: 67  ACRRLGHWRLNECTLYVTLEPCPMCTGAIIQARLGLLVYGTPDPKTGTIDSVFDLAASAA 126

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H  +   G+ +++ R+ +QD+F + R
Sbjct: 127 SNHHLQSLGGVCQEQCREQLQDWFAQHR 154


>gi|319901083|ref|YP_004160811.1| CMP/dCMP deaminase zinc-binding protein [Bacteroides helcogenes P
           36-108]
 gi|319416114|gb|ADV43225.1| CMP/dCMP deaminase zinc-binding protein [Bacteroides helcogenes P
           36-108]
          Length = 159

 Score =  200 bits (510), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 58/147 (39%), Positives = 80/147 (54%), Gaps = 5/147 (3%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
             + +M  AL EA+ A  R E+PVGAV V  ++II+RA N    L DVTAHAE+ AI   
Sbjct: 17  DDSYYMKQALLEARKAGERGEVPVGAVVVCKDRIIARAHNLTETLTDVTAHAEMQAITAA 76

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
              L  + L E  LYVT+EPC MCA AI+ A++ +L +GA + K G      Q Y     
Sbjct: 77  ASTLGGKYLNECTLYVTVEPCVMCAGAIAWAQMGKLVFGAVDEKRG-----YQRYASQAL 131

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           H    +  GI       ++++FF  +R
Sbjct: 132 HPKTIVVQGILADECAALMKEFFAGKR 158


>gi|239980910|ref|ZP_04703434.1| cytidine/deoxycytidine deaminase [Streptomyces albus J1074]
          Length = 168

 Score =  200 bits (510), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 52/142 (36%), Positives = 74/142 (52%), Gaps = 1/142 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  AL EAQ A    ++PVGAV +  + +++S A N      D TAHAEILA+R      
Sbjct: 27  MRQALAEAQRAGRGGDVPVGAVVLDPDGRLLSAAHNEREADGDPTAHAEILALRRAAARS 86

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
            +  L +  L VTLEPCTMCA A   +R+ R+ YGA + K G   +          +H P
Sbjct: 87  GRWRLTDCTLVVTLEPCTMCAGAAVQSRVDRVVYGARDEKAGAAGSLWDVVRDRRLNHRP 146

Query: 127 EIYPGISEQRSRQIIQDFFKER 148
           E+  G+       ++ +FF+ R
Sbjct: 147 EVIEGVLAADCAALLTEFFRAR 168


>gi|327483608|gb|AEA78015.1| tRNA-specific adenosine-34 deaminase [Vibrio cholerae LMA3894-4]
          Length = 175

 Score =  200 bits (510), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 55/147 (37%), Positives = 79/147 (53%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
           +   FM  A+  A  A  + E+PVGAV V + +II+   N +    D TAHAEI  IR  
Sbjct: 9   QDEQFMRRAIALAAQAEAQGEVPVGAVLVRDGEIIAEGWNGSITNHDATAHAEIEVIRKA 68

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
            + LS   L +  LYVTLEPC MCA A+  +R++R+ YGA + K G        ++    
Sbjct: 69  GKALSNYRLLDTTLYVTLEPCPMCAGALLHSRVKRIVYGAPDLKAGAAGTVLDLFSSQAA 128

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H   +  G+ E+  R  +Q FF+ RR
Sbjct: 129 YHYATVEKGLLEEECRAQLQAFFQRRR 155


>gi|238750377|ref|ZP_04611878.1| tRNA-specific adenosine deaminase [Yersinia rohdei ATCC 43380]
 gi|238711308|gb|EEQ03525.1| tRNA-specific adenosine deaminase [Yersinia rohdei ATCC 43380]
          Length = 195

 Score =  200 bits (510), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 56/147 (38%), Positives = 78/147 (53%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
               +M  AL  A  A    E+PVGA+ VL+N++I    NR     D TAHAEI+A+R G
Sbjct: 31  SDEYWMQRALALALRAQAEGEVPVGAILVLDNQVIGEGWNRPIRNNDPTAHAEIMALRQG 90

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
            + +    L +  LYVTLEPC MCA A+  +RIRRL YGA++ K G   +          
Sbjct: 91  GQAVQNYRLIDATLYVTLEPCVMCAGAMVHSRIRRLVYGANDLKTGAAGSLLDILRHPGM 150

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H  E+  G+  +     +  FF+ RR
Sbjct: 151 NHQIEVCAGVLAESCSHQLSAFFRLRR 177


>gi|153216547|ref|ZP_01950510.1| zinc-binding domain protein [Vibrio cholerae 1587]
 gi|124114222|gb|EAY33042.1| zinc-binding domain protein [Vibrio cholerae 1587]
          Length = 193

 Score =  200 bits (510), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 55/147 (37%), Positives = 79/147 (53%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
           +   FM  A+  A  A  + E+PVGAV V + +II+   N +    D TAHAEI  IR  
Sbjct: 27  QDEQFMRRAIALAAQAEAQGEVPVGAVLVRDGEIIAEGCNGSITNHDATAHAEIEVIRKA 86

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
            + LS   L +  LYVTLEPC MCA A+  +R++R+ YGA + K G        ++    
Sbjct: 87  GKALSNYRLLDTTLYVTLEPCPMCAGALLHSRVKRIVYGAPDLKAGAAGTVMDLFSSQAA 146

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H   +  G+ E+  R  +Q FF+ RR
Sbjct: 147 YHYATVEKGLLEEECRAQLQAFFQRRR 173


>gi|282880121|ref|ZP_06288841.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Prevotella timonensis CRIS 5C-B1]
 gi|281305994|gb|EFA98034.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Prevotella timonensis CRIS 5C-B1]
          Length = 151

 Score =  200 bits (510), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 64/149 (42%), Positives = 84/149 (56%), Gaps = 5/149 (3%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +K+   FM  AL EAQ A    EIP+GAV V   +IISRA N    L DVTAHAE+LAI 
Sbjct: 7   LKRDEYFMRKALIEAQAAFDEGEIPIGAVVVCKGQIISRAHNLTERLHDVTAHAEMLAIT 66

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
                L  + L +  LYVT+EPC MCA+A   A++ R+ +GAS+ K G      + Y   
Sbjct: 67  AATNQLGGKYLTDCTLYVTIEPCPMCASACGWAQLSRVVFGASDDKRG-----FKRYAPK 121

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             H   EI  G+  +    ++Q FFK+RR
Sbjct: 122 VLHPKAEITNGVLREDCMALMQLFFKKRR 150


>gi|237733437|ref|ZP_04563918.1| tRNA-adenosine deaminase [Mollicutes bacterium D7]
 gi|229383472|gb|EEO33563.1| tRNA-adenosine deaminase [Coprobacillus sp. D7]
          Length = 152

 Score =  200 bits (510), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 58/149 (38%), Positives = 82/149 (55%), Gaps = 2/149 (1%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M +   FM  A +EA      +E+PVGAV V + KII+   N     K  TAHAEI+AI 
Sbjct: 1   MDQDLEFMEIAYQEALKCLDMDEVPVGAVIVKDGKIIACGRNLRETSKRATAHAEIIAIE 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
             CR L+   L E  LYVTLEPC MC+ AI  +RI+R+ +GA   +   +    Q  +  
Sbjct: 61  EACRTLNSWYLDECTLYVTLEPCVMCSGAIINSRIQRVVFGAFESRWLALTTIYQ--SDI 118

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H P I  G+   +  ++I+D+FK +R
Sbjct: 119 PVNHQPVIVSGVLGDKCSKVIKDYFKNKR 147


>gi|333029805|ref|ZP_08457866.1| CMP/dCMP deaminase zinc-binding [Bacteroides coprosuis DSM 18011]
 gi|332740402|gb|EGJ70884.1| CMP/dCMP deaminase zinc-binding [Bacteroides coprosuis DSM 18011]
          Length = 145

 Score =  200 bits (510), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 61/147 (41%), Positives = 86/147 (58%), Gaps = 5/147 (3%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
             + FM  AL+EA++A    EIPVGAV V + ++I+RA N    L DVTAHAE+ AI M 
Sbjct: 4   DDSYFMKMALQEAESAMKMGEIPVGAVVVSHGQVIARAHNMTERLTDVTAHAEMQAITMA 63

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
             +L  + L +  LYVTLEPC MCA AIS A++ +L  GA++ K G      +       
Sbjct: 64  ADLLGGKYLSDCTLYVTLEPCVMCAGAISWAQLGKLVIGANDSKRG-----YKLLAPDVL 118

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           H   E+  G+   +S +++Q FF+ RR
Sbjct: 119 HPKTEVIEGVLADKSTEMLQSFFRARR 145


>gi|302879427|ref|YP_003847991.1| CMP/dCMP deaminase zinc-binding [Gallionella capsiferriformans
           ES-2]
 gi|302582216|gb|ADL56227.1| CMP/dCMP deaminase zinc-binding [Gallionella capsiferriformans
           ES-2]
          Length = 240

 Score =  200 bits (510), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 52/128 (40%), Positives = 69/128 (53%)

Query: 22  NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81
            E+PVGAV V + +II R  N    L D +AHAE+ A+R   + L    L   +L+VTLE
Sbjct: 96  GEVPVGAVVVKDGQIIGRGYNAPISLHDPSAHAEMQALRAAAQYLGNYRLVGCELFVTLE 155

Query: 82  PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141
           PC MCA AI  ARIRRL YGAS+ K G   +    +     +H  E+  G+  +     +
Sbjct: 156 PCVMCAGAIMHARIRRLVYGASDFKTGVCGSLLDLFAEQRLNHHTEVAGGVLAEACGATL 215

Query: 142 QDFFKERR 149
             FF  RR
Sbjct: 216 SRFFSLRR 223


>gi|291569301|dbj|BAI91573.1| putative cytidine/deoxycytidylate deaminase [Arthrospira platensis
           NIES-39]
          Length = 157

 Score =  200 bits (510), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 57/149 (38%), Positives = 75/149 (50%), Gaps = 1/149 (0%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIR 60
              + +M  AL+    A    E+PVGA+ V    K+I++  NR     D TAHAEI+A+R
Sbjct: 6   TTHSHWMQQALKLGAAAGEAGEVPVGALIVNQQGKLIAQGENRRERDPDPTAHAEIIALR 65

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              ++L    L    LYVTLEPC MCA AI  ARI  L YG  +PK G I          
Sbjct: 66  QASQVLGDWHLNTCTLYVTLEPCPMCAGAILQARIGLLVYGVDDPKTGSIRTVCNLPDSP 125

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H   +  GI E   RQ +Q +F + R
Sbjct: 126 ASYHRLPVLGGILESSCRQQLQSWFAQHR 154


>gi|188996445|ref|YP_001930696.1| CMP/dCMP deaminase zinc-binding [Sulfurihydrogenibium sp. YO3AOP1]
 gi|188931512|gb|ACD66142.1| CMP/dCMP deaminase zinc-binding [Sulfurihydrogenibium sp. YO3AOP1]
          Length = 149

 Score =  200 bits (510), Expect = 6e-50,   Method: Composition-based stats.
 Identities = 56/149 (37%), Positives = 86/149 (57%), Gaps = 1/149 (0%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M     F+  A++EA+ A  +NE+PVGAV V + KIIS+A N+     +   HAEILAI 
Sbjct: 1   MNYHKKFIDQAVKEAEKALKKNEVPVGAVIVKDGKIISKAHNQRISKNNALYHAEILAIE 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
             C+ L    L +  LY TLEPC MCA A+  ARI+++ + A + KGG + +    +   
Sbjct: 61  KSCKKLKTWRLDDAVLYTTLEPCLMCAGAVMQARIKKVVFCAKDEKGGAVLSKYTVFDDK 120

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
               + E Y  I ++R  +++++FFK+ R
Sbjct: 121 KLPFNVE-YEYIPDERCSKLLKEFFKKLR 148


>gi|305665590|ref|YP_003861877.1| putative cytosine/adenosine deaminase [Maribacter sp. HTCC2170]
 gi|88710346|gb|EAR02578.1| putative cytosine/adenosine deaminase [Maribacter sp. HTCC2170]
          Length = 149

 Score =  200 bits (510), Expect = 6e-50,   Method: Composition-based stats.
 Identities = 55/147 (37%), Positives = 86/147 (58%), Gaps = 6/147 (4%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
               FM  AL+EA+ A  + E+P+GA+ V++++II+RA N   +L DVTAHAE+ AI   
Sbjct: 6   DDTYFMKKALQEAEAAYEKGEVPIGAIIVIDDRIIARAHNLTEQLNDVTAHAEMQAITAA 65

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
              L  + L    +YVTLEPC MCA A+  ++I ++ +GA + + G    GT+       
Sbjct: 66  ANFLGGKYLQNCTMYVTLEPCQMCAGALYWSQISKIVFGAKDTERGCGAMGTKL------ 119

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           H   +I  G+ E  + ++++ FF ERR
Sbjct: 120 HPKTKITGGVMENEASELLKRFFIERR 146


>gi|323344759|ref|ZP_08084983.1| tRNA-specific adenosine deaminase [Prevotella oralis ATCC 33269]
 gi|323094029|gb|EFZ36606.1| tRNA-specific adenosine deaminase [Prevotella oralis ATCC 33269]
          Length = 151

 Score =  200 bits (510), Expect = 6e-50,   Method: Composition-based stats.
 Identities = 66/148 (44%), Positives = 85/148 (57%), Gaps = 5/148 (3%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           +K   FM  AL EA+ A    EIP+GAV V  ++II+RA N    L DVTAHAE+ AI  
Sbjct: 9   QKDEQFMQKALIEAKAAFDAGEIPIGAVIVCKDRIIARAHNLTETLHDVTAHAEMQAITA 68

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
               L  + LPE  LYVT+EPCTMCA AI  A++RR+ YGA++ K G        Y    
Sbjct: 69  AADALGGKYLPECTLYVTIEPCTMCAGAIGWAQLRRIVYGATDEKRG-----FHKYAPEA 123

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            H    I  GI EQ  R++++ FF  +R
Sbjct: 124 LHPKATITAGILEQECRELMRQFFLSKR 151


>gi|241203269|ref|YP_002974365.1| CMP/dCMP deaminase zinc-binding [Rhizobium leguminosarum bv.
           trifolii WSM1325]
 gi|240857159|gb|ACS54826.1| CMP/dCMP deaminase zinc-binding [Rhizobium leguminosarum bv.
           trifolii WSM1325]
          Length = 145

 Score =  200 bits (509), Expect = 7e-50,   Method: Composition-based stats.
 Identities = 89/142 (62%), Positives = 110/142 (77%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  ALEEA+ A  R E+P+GAV V+++  +SR+GNR RELKDVTAHAEI AIR+ C  L 
Sbjct: 1   MEMALEEARAAGERGEVPIGAVVVIDDIAVSRSGNRTRELKDVTAHAEIAAIRLACEALG 60

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
           QE L   DLYVTLEPCTMCAAAIS ARIRRLYYGA +PKGGG++NG +FY   TCHH+PE
Sbjct: 61  QERLAGADLYVTLEPCTMCAAAISFARIRRLYYGAEDPKGGGVDNGVRFYGQPTCHHAPE 120

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
           +Y G +E +S  +++ FF +RR
Sbjct: 121 VYSGFNEVQSANLLRRFFSQRR 142


>gi|77917942|ref|YP_355757.1| putative deaminase [Pelobacter carbinolicus DSM 2380]
 gi|77544025|gb|ABA87587.1| tRNA-adenosine deaminase [Pelobacter carbinolicus DSM 2380]
          Length = 159

 Score =  200 bits (509), Expect = 7e-50,   Method: Composition-based stats.
 Identities = 54/142 (38%), Positives = 72/142 (50%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  AL EA  AA   E+PVGAV V +  II R  N      D T HAE++AIR     + 
Sbjct: 1   MQEALVEASAAARLGEVPVGAVVVKDGMIIGRGHNLRETSNDPTTHAEMIAIRQAAAAID 60

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
              L    LYVTLEPC MC  AI LARI RL +G+ +P+ G + +          +H   
Sbjct: 61  SWRLIGCTLYVTLEPCVMCMGAIILARIPRLVFGSRDPRVGAVGSIFDLSRDERFNHQVA 120

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
           +  G+    S  ++  FF++ R
Sbjct: 121 VTEGVLALESSDMLSGFFRQLR 142


>gi|297620926|ref|YP_003709063.1| tRNA-specific adenosine deaminase [Waddlia chondrophila WSU
           86-1044]
 gi|297376227|gb|ADI38057.1| tRNA-specific adenosine deaminase [Waddlia chondrophila WSU
           86-1044]
          Length = 176

 Score =  200 bits (509), Expect = 7e-50,   Method: Composition-based stats.
 Identities = 52/148 (35%), Positives = 80/148 (54%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
            +   +M  AL+EA  A ++ E+PVGA+ V   K+I+R  N+   L+D TAHAE+L I +
Sbjct: 17  NEDETYMLAALKEAWKAFVKGEVPVGAILVKEGKVIARGHNQVEMLRDATAHAEMLCITV 76

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
                    L    LY T+EPC+MCA A+ L+R+  L +GA + + G   +    +    
Sbjct: 77  AEAAEDNWRLNGATLYCTIEPCSMCAGAMLLSRVSTLVWGAPDIRHGANGSWVNLFGKPH 136

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
             H  ++  GI       ++QDFFK+RR
Sbjct: 137 PTHEIQVRNGILADFCAMLMQDFFKKRR 164


>gi|270285018|ref|ZP_06194412.1| cytidine/deoxycytidylate deaminase family protein [Chlamydia
           muridarum Nigg]
 gi|270289043|ref|ZP_06195345.1| cytidine/deoxycytidylate deaminase family protein [Chlamydia
           muridarum Weiss]
          Length = 148

 Score =  200 bits (509), Expect = 7e-50,   Method: Composition-based stats.
 Identities = 57/142 (40%), Positives = 78/142 (54%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  AL+EA+ A   +E+PVG + V  + II+R  N    LKD TAHAE++ I      L 
Sbjct: 1   MKKALDEARKAYELDEVPVGCIIVQGDAIIARGHNSVERLKDPTAHAEMICISAAAEYLQ 60

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
              L +  LY TLEPC MCA AI LARI R+ +GA + + G   +    +      H  E
Sbjct: 61  NWRLKDTTLYCTLEPCLMCAGAIQLARIPRIVWGAPDLRLGAGGSWLNVFLEKHPFHQVE 120

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
             PGI  Q S  ++++FF E+R
Sbjct: 121 CCPGICHQESEWLMKNFFWEKR 142


>gi|227431250|ref|ZP_03913304.1| tRNA-adenosine deaminase [Leuconostoc mesenteroides subsp. cremoris
           ATCC 19254]
 gi|227353012|gb|EEJ43184.1| tRNA-adenosine deaminase [Leuconostoc mesenteroides subsp. cremoris
           ATCC 19254]
          Length = 168

 Score =  200 bits (509), Expect = 7e-50,   Method: Composition-based stats.
 Identities = 60/148 (40%), Positives = 82/148 (55%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           ++ + FM  AL EA+ A    E+P+GAV V  N++I+RA N     +  TAHAE+LAI  
Sbjct: 10  EQIDYFMQEALNEAKIAQSEGEVPIGAVIVYENQMIARAHNHREADQLATAHAELLAIES 69

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
               L    L    L+VTLEPC MCA AI  ARI  +YYGA++PKGG   +         
Sbjct: 70  ANTKLKSWRLENTALFVTLEPCIMCAGAIINARIPVVYYGANDPKGGATRSLYSLLEDNR 129

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H  ++Y GI  + S  ++Q FF   R
Sbjct: 130 LNHMVKVYEGIRGEESGLLLQRFFSNIR 157


>gi|170078671|ref|YP_001735309.1| cytidine and deoxycytidylate deaminase zinc-binding protein
           [Synechococcus sp. PCC 7002]
 gi|169886340|gb|ACB00054.1| Cytidine and deoxycytidylate deaminase zinc-binding protein
           [Synechococcus sp. PCC 7002]
          Length = 158

 Score =  200 bits (509), Expect = 7e-50,   Method: Composition-based stats.
 Identities = 54/146 (36%), Positives = 87/146 (59%), Gaps = 1/146 (0%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIR 60
           ++   +M  A+  A+ A    EIPVGAV V   N+ ++++GNR  + +D TAHAE+L IR
Sbjct: 8   RRHYHWMQKAIALAKVAGQSGEIPVGAVIVDGKNQCLAQSGNRKEKTQDPTAHAEMLVIR 67

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              ++     L +  LYVTLEPC MCA A+  +R++++ YGA +PK G + +   F    
Sbjct: 68  AASQMRQDWHLQDCTLYVTLEPCPMCAGAMIHSRLKQVVYGADDPKTGALRSMANFPDAP 127

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFK 146
             +HS  +  GI+    RQ++Q++F+
Sbjct: 128 FSNHSFPVLGGIAAMECRQLLQNWFQ 153


>gi|322690120|ref|YP_004209854.1| cytidine/deoxycytidine deaminase [Bifidobacterium longum subsp.
           infantis 157F]
 gi|320461456|dbj|BAJ72076.1| putative cytidine/deoxycytidine deaminase [Bifidobacterium longum
           subsp. infantis 157F]
          Length = 149

 Score =  200 bits (509), Expect = 7e-50,   Method: Composition-based stats.
 Identities = 56/150 (37%), Positives = 76/150 (50%), Gaps = 2/150 (1%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAI 59
           M+     M CALE A  AA   ++PVGAV +    +I+ R  N      D  AHAEI+A+
Sbjct: 1   MEYDEA-MRCALELAGQAAAAGDVPVGAVVLDAAGQIVGRGYNTREADGDPLAHAEIIAM 59

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
           R   + L    L +  L VTLEPC MCA A     I  + +GA +PK G   +       
Sbjct: 60  RQAAQALGAWNLADCTLAVTLEPCPMCAGACIQTHIGTIAFGAWDPKLGACGSIWDIPRD 119

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
               HSPE++ G+ E   + I+ DFF +RR
Sbjct: 120 PHIGHSPEVHGGVLEVECQSILTDFFAQRR 149


>gi|210623915|ref|ZP_03294124.1| hypothetical protein CLOHIR_02076 [Clostridium hiranonis DSM 13275]
 gi|210153279|gb|EEA84285.1| hypothetical protein CLOHIR_02076 [Clostridium hiranonis DSM 13275]
          Length = 371

 Score =  200 bits (509), Expect = 7e-50,   Method: Composition-based stats.
 Identities = 57/149 (38%), Positives = 74/149 (49%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M     FM  AL EA+ A  + E P+GAV V + +II R  N    LKD TAH+EILAI+
Sbjct: 223 MSDDEYFMMEALREAKKAYDKEETPIGAVIVKDGEIIGRGHNLTEHLKDATAHSEILAIK 282

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              + L    L    +YVT+EPC MC  AI  +RIR +  GA   K   IE  + F    
Sbjct: 283 NAAKKLKGWRLFGCKMYVTMEPCVMCCGAIVNSRIREVVIGAKRVKNAKIEKQSDFKKEY 342

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
                 E   G+ E+    ++  FFK  R
Sbjct: 343 FEDSKVEYKYGVLEEECAGMLGSFFKRLR 371


>gi|225076485|ref|ZP_03719684.1| hypothetical protein NEIFLAOT_01531 [Neisseria flavescens
           NRL30031/H210]
 gi|224952164|gb|EEG33373.1| hypothetical protein NEIFLAOT_01531 [Neisseria flavescens
           NRL30031/H210]
          Length = 240

 Score =  200 bits (509), Expect = 7e-50,   Method: Composition-based stats.
 Identities = 51/148 (34%), Positives = 78/148 (52%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
                FM  A+E+A+ +A   E+PVGAV V   K I+ A N      +V+ HAEI A+  
Sbjct: 90  SDMEAFMRLAIEQARQSATLGEVPVGAVIVYQGKAIAAAHNTCIGDHNVSHHAEINALAA 149

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
             + L    L + D+Y+TLEPC+MCA+A+  AR+ R+ YGA+  K G   +    +    
Sbjct: 150 AGKALQNYRLEDCDVYITLEPCSMCASALIQARVGRVIYGAAEAKTGAAGSVVDLFADKR 209

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +    I   I  +  + ++QDFF  +R
Sbjct: 210 LNKHTAILGSILAEECQSVLQDFFAAKR 237


>gi|189462552|ref|ZP_03011337.1| hypothetical protein BACCOP_03242 [Bacteroides coprocola DSM 17136]
 gi|189430713|gb|EDU99697.1| hypothetical protein BACCOP_03242 [Bacteroides coprocola DSM 17136]
          Length = 144

 Score =  200 bits (509), Expect = 7e-50,   Method: Composition-based stats.
 Identities = 62/149 (41%), Positives = 82/149 (55%), Gaps = 5/149 (3%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M     +M  AL EAQ AA R E+PVGAV V  ++II+R+ N    L DVTAHAE+ AI 
Sbjct: 1   MADDVFYMKQALIEAQKAADRGEVPVGAVVVCRDRIIARSHNLTETLNDVTAHAEMQAIT 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
                L  + L E  LYVT+EPC MCA AI+ A+  +L +GA + K G      Q Y   
Sbjct: 61  AAANTLGGKYLNECTLYVTVEPCVMCAGAIAWAQTGKLVFGAEDEKRG-----YQRYAPD 115

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             H    +  GI      Q+++ FFK++R
Sbjct: 116 ALHPKTVVVKGILADDCAQLMKGFFKKKR 144


>gi|167586888|ref|ZP_02379276.1| CMP/dCMP deaminase, zinc-binding protein [Burkholderia ubonensis
           Bu]
          Length = 191

 Score =  200 bits (509), Expect = 7e-50,   Method: Composition-based stats.
 Identities = 53/143 (37%), Positives = 75/143 (52%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
           +   FM  A   A  A    E+PVGAV V  +++I+R  N      D +AHAE+ A+RM 
Sbjct: 28  RDTHFMRLAQAAADEARAAGEVPVGAVLVRGDEVIARGFNHPIGGHDPSAHAEMAALRMA 87

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
            + L    +P  +LYVTLEPC MCA AI  ARI R+ YGA++PK G   +    +     
Sbjct: 88  AQHLQNYRMPGCELYVTLEPCLMCAGAIMHARIARVVYGAADPKTGACGSVIDAFANPQL 147

Query: 123 HHSPEIYPGISEQRSRQIIQDFF 145
           +H  E+  G+        ++ FF
Sbjct: 148 NHHTEVVGGVLADECGAALKSFF 170


>gi|71066051|ref|YP_264778.1| tRNA-adenosine deaminase [Psychrobacter arcticus 273-4]
 gi|71039036|gb|AAZ19344.1| tRNA-adenosine deaminase [Psychrobacter arcticus 273-4]
          Length = 195

 Score =  200 bits (509), Expect = 7e-50,   Method: Composition-based stats.
 Identities = 59/148 (39%), Positives = 85/148 (57%), Gaps = 1/148 (0%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
           +   +M+ AL+ A+  A R E+PVGAV V N +II +  N      D TAHAEI+A+R  
Sbjct: 37  EDIKWMTEALKLAKQGAEREEVPVGAVLVHNQQIIGQGFNEPIGRCDATAHAEIVALREA 96

Query: 63  CRILSQEILP-EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
           C  L    LP +  LYVTLEPCTMC  A+  AR+ RL Y  + P+ G + +         
Sbjct: 97  CAHLKNYRLPLQTTLYVTLEPCTMCIGALIHARVDRLVYSTNEPRAGMVGSQMNLAAQPF 156

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H  ++  G+  + S Q+++DFF+ERR
Sbjct: 157 YNHHMQVDTGLCREHSSQMLKDFFRERR 184


>gi|318606786|emb|CBY28284.1| tRNA-specific adenosine-34 deaminase [Yersinia enterocolitica
           subsp. palearctica Y11]
          Length = 183

 Score =  200 bits (509), Expect = 8e-50,   Method: Composition-based stats.
 Identities = 57/147 (38%), Positives = 78/147 (53%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
               +M  AL  A  A    E+PVGA+ VL+N++I    NR     D TAHAEI+A+R G
Sbjct: 18  SDEYWMQRALALALRAQAEGEVPVGAILVLDNQVIGEGWNRPIRDNDPTAHAEIMALRQG 77

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
            +++    L +  LYVTLEPC MCA A+  +RIRRL YGA++ K G   +          
Sbjct: 78  GQVVQNYRLIDATLYVTLEPCVMCAGAMVHSRIRRLVYGANDLKTGAAGSLVDILRHPGM 137

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H  EI  G+        +  FF+ RR
Sbjct: 138 NHQIEITAGVMADVCAHQLSAFFRVRR 164


>gi|149923193|ref|ZP_01911606.1| cytidine and deoxycytidylate deaminase zinc-binding domain protein
           [Plesiocystis pacifica SIR-1]
 gi|149815967|gb|EDM75483.1| cytidine and deoxycytidylate deaminase zinc-binding domain protein
           [Plesiocystis pacifica SIR-1]
          Length = 165

 Score =  200 bits (509), Expect = 8e-50,   Method: Composition-based stats.
 Identities = 50/138 (36%), Positives = 72/138 (52%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  A+     AA R ++PVGA+ V + KI+    N   +  D T HAE++A+R  CR   
Sbjct: 1   MRMAMALGAEAATRGDVPVGALVVRDGKILGVGFNTREQDHDPTGHAEVVAMREACRQAR 60

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
           +  L    LYVTLEPC MCA  +   RI RL YGA + K G + +  Q       +H  E
Sbjct: 61  RWRLDGATLYVTLEPCPMCAGTLVNTRIARLVYGAHDAKAGAVRSLYQLCEDPRLNHRLE 120

Query: 128 IYPGISEQRSRQIIQDFF 145
           +  G+  +    +++DFF
Sbjct: 121 VVGGVLAEECAALLKDFF 138


>gi|326575668|gb|EGE25591.1| tRNA-specific adenosine deaminase [Moraxella catarrhalis CO72]
          Length = 181

 Score =  200 bits (509), Expect = 8e-50,   Method: Composition-based stats.
 Identities = 57/143 (39%), Positives = 79/143 (55%), Gaps = 1/143 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M+ ALE A+  A   EIPVGAV V   +I+    N     +D TAHAEI+A+R  C  L+
Sbjct: 29  MNRALEIAKQGAKFGEIPVGAVVVYEGRILGEGYNCPITTQDPTAHAEIVAVRRACETLN 88

Query: 68  QEILP-EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
              LP    LYVTLEPCTMC   +  ARI R+ +GA  PK G + +  +       +H  
Sbjct: 89  NYRLPKGCILYVTLEPCTMCFGTLIHARISRVVFGAFEPKAGVVVSQLKLPEQVFYNHHL 148

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
            +Y G+   +S  ++  FF++RR
Sbjct: 149 SVYGGLLADKSSALLSGFFRQRR 171


>gi|325281446|ref|YP_004253988.1| CMP/dCMP deaminase zinc-binding protein [Odoribacter splanchnicus
           DSM 20712]
 gi|324313255|gb|ADY33808.1| CMP/dCMP deaminase zinc-binding protein [Odoribacter splanchnicus
           DSM 20712]
          Length = 145

 Score =  200 bits (509), Expect = 8e-50,   Method: Composition-based stats.
 Identities = 66/149 (44%), Positives = 82/149 (55%), Gaps = 5/149 (3%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M     +M  AL+EA+ AA   EIPVGAV V   KII+RA N   +L DVTAHAE+LAI 
Sbjct: 1   MTTHEYYMHKALQEARQAAEEGEIPVGAVVVCKGKIIARAHNETEKLNDVTAHAEMLAIT 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
           M    L  + L E  LYVT+EPCTMCA A+S A++  L  GA +P  G         T  
Sbjct: 61  MATSYLGGKYLNECTLYVTMEPCTMCAGALSWAQLGELVTGAPDPHRG-----YSRLTPP 115

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             H    I  GI      +I++ FFK +R
Sbjct: 116 VLHPKTRITSGILTGECSEIVKQFFKAKR 144


>gi|270294540|ref|ZP_06200742.1| conserved hypothetical protein [Bacteroides sp. D20]
 gi|270276007|gb|EFA21867.1| conserved hypothetical protein [Bacteroides sp. D20]
          Length = 144

 Score =  199 bits (508), Expect = 8e-50,   Method: Composition-based stats.
 Identities = 59/147 (40%), Positives = 80/147 (54%), Gaps = 5/147 (3%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
             + +M  AL EA  A  R E+PVGAV V  ++II+RA N    L DVTAHAE+ AI   
Sbjct: 2   DDSYYMKQALLEAHKAGERGEVPVGAVVVCKDRIIARAHNLTETLTDVTAHAEMQAITAA 61

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
              L  + L E  LYVT+EPC MCA AI+ A++ RL +GA + K G      Q Y     
Sbjct: 62  AATLGGKYLNECTLYVTVEPCVMCAGAIAWAQMGRLVFGAEDEKRG-----YQRYASQAL 116

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           H   ++  GI       ++++FF  +R
Sbjct: 117 HPKTQVVKGILADECAALMKEFFAAKR 143


>gi|218682181|ref|ZP_03529782.1| CMP/dCMP deaminase zinc-binding protein [Rhizobium etli CIAT 894]
          Length = 145

 Score =  199 bits (508), Expect = 8e-50,   Method: Composition-based stats.
 Identities = 88/142 (61%), Positives = 110/142 (77%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  ALEEA+ A  R E+P+GAV V+++  +SR+GNR REL DVTAHAEI AIR+ C  L 
Sbjct: 1   MEMALEEARAAGERGEVPIGAVVVIDDIAVSRSGNRTRELNDVTAHAEIAAIRLACEALG 60

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
           QE L   DLYVTLEPCTMCAAAIS ARIRRLYYGA +PKGGG++NG +FY   TCHH+PE
Sbjct: 61  QERLAGADLYVTLEPCTMCAAAISFARIRRLYYGAEDPKGGGVDNGVRFYAQPTCHHAPE 120

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
           +Y G +E +S +I++ FF ++R
Sbjct: 121 VYSGFNEVQSAEILRRFFSQKR 142


>gi|15836532|ref|NP_301056.1| cytosine deaminase [Chlamydophila pneumoniae J138]
 gi|33242370|ref|NP_877311.1| putative cytosine deaminase [Chlamydophila pneumoniae TW-183]
 gi|8979374|dbj|BAA99208.1| cytosine deaminase [Chlamydophila pneumoniae J138]
 gi|33236881|gb|AAP98968.1| putative cytosine deaminase [Chlamydophila pneumoniae TW-183]
          Length = 148

 Score =  199 bits (508), Expect = 8e-50,   Method: Composition-based stats.
 Identities = 56/142 (39%), Positives = 81/142 (57%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  A +EA+ A  ++E+PVG V V ++KII+RA N   +LKD TAHAEIL I    + L 
Sbjct: 1   MQQAFKEARKAYDQDEVPVGCVIVKDDKIIARAHNSVEKLKDATAHAEILCIGSAAQDLD 60

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
              L +  LY TLEPC MCA AI LARI R+ + A + + G   +    +T     H+  
Sbjct: 61  NWRLLDTVLYCTLEPCLMCAGAIQLARIPRIVWAAPDVRLGAGGSWVNIFTEEHPFHTVS 120

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
              G+  + +  +++ FF E+R
Sbjct: 121 CTGGVCSEEAEHLMKKFFVEKR 142


>gi|320095329|ref|ZP_08027018.1| tRNA-specific adenosine deaminase [Actinomyces sp. oral taxon 178
           str. F0338]
 gi|319977741|gb|EFW09395.1| tRNA-specific adenosine deaminase [Actinomyces sp. oral taxon 178
           str. F0338]
          Length = 443

 Score =  199 bits (508), Expect = 8e-50,   Method: Composition-based stats.
 Identities = 47/143 (32%), Positives = 73/143 (51%), Gaps = 1/143 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  AL  A  A    ++PVGAV +    +++ +  N   + +D   HAEI+A+R   R L
Sbjct: 11  MGKALYLADRARETGDVPVGAVVLDTLGRVVGKGWNCREKDRDPAGHAEIVALRDAARTL 70

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
            +  L    L V+LEPCTMCA AI  AR+ R+ +GA +PK G   +       +  +H  
Sbjct: 71  KRWNLVGCTLVVSLEPCTMCAGAIVSARVDRVVFGAWDPKAGAAGSVRDVLRDSRLNHQV 130

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+  G+    +   ++ FF  +R
Sbjct: 131 EVVGGVLGHEAAMQLRSFFAGKR 153


>gi|255067649|ref|ZP_05319504.1| tRNA-specific adenosine deaminase [Neisseria sicca ATCC 29256]
 gi|255048123|gb|EET43587.1| tRNA-specific adenosine deaminase [Neisseria sicca ATCC 29256]
          Length = 243

 Score =  199 bits (508), Expect = 8e-50,   Method: Composition-based stats.
 Identities = 60/145 (41%), Positives = 80/145 (55%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
             FM  AL +A+ +A   EIPVGAV V NN+II+ A N      D++ HAEI A+     
Sbjct: 96  ETFMRAALTQAEQSASIGEIPVGAVVVSNNQIIAAAHNTCVSDHDISRHAEIRALAAAGA 155

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
            L    L   DLY+TLEPC MCA+AI  AR+RR+ YGA+ PK G   +    +     + 
Sbjct: 156 ALQNYRLDGCDLYITLEPCAMCASAIIQARVRRVIYGAAEPKTGAAGSVVNLFANPLLNK 215

Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149
              I  GI E   + ++Q FF+ RR
Sbjct: 216 HTAIKGGILEDECKAVLQAFFQTRR 240


>gi|255007517|ref|ZP_05279643.1| cytosine deaminase [Bacteroides fragilis 3_1_12]
 gi|313145211|ref|ZP_07807404.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
 gi|313133978|gb|EFR51338.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
          Length = 145

 Score =  199 bits (508), Expect = 8e-50,   Method: Composition-based stats.
 Identities = 60/149 (40%), Positives = 80/149 (53%), Gaps = 5/149 (3%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M   + FM  AL EA  A  R E+PVGAV V   +II+RA N    L DVTAHAE+ AI 
Sbjct: 1   MLDDSYFMKQALVEAAKAGERGEVPVGAVVVCKERIIARAHNLTETLNDVTAHAEMQAIT 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
               +L  + L E  LYVT+EPC MCA AI+ A+  +L +GA + K G      Q Y   
Sbjct: 61  AAANVLGGKYLNECTLYVTVEPCVMCAGAIAWAQTGKLVFGAEDEKRG-----YQRYAPK 115

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
           + H    +  GI       ++++FF  +R
Sbjct: 116 SLHPKTVVVKGILADECANLMKNFFASKR 144


>gi|261855229|ref|YP_003262512.1| CMP/dCMP deaminase zinc-binding protein [Halothiobacillus
           neapolitanus c2]
 gi|261835698|gb|ACX95465.1| CMP/dCMP deaminase zinc-binding protein [Halothiobacillus
           neapolitanus c2]
          Length = 153

 Score =  199 bits (508), Expect = 8e-50,   Method: Composition-based stats.
 Identities = 60/146 (41%), Positives = 81/146 (55%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
              F+  AL+EA  AA   E+PVGAV V   K+I+   N    L D +AHAEILA+R   
Sbjct: 8   DRQFIQQALDEANLAAADGEVPVGAVVVRQGKVIATGRNAPIRLNDPSAHAEILALRAAG 67

Query: 64  RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123
             L+   L +  LYVTLEPC MC AAIS ARI R+ + A +P+ G              H
Sbjct: 68  MALANYRLDDCTLYVTLEPCPMCMAAISHARIARVVFAAPDPRAGACGGAIDLNRAPWHH 127

Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149
           HS  +  G  EQ + ++++ FF+E+R
Sbjct: 128 HSVVVDTGPCEQEAAELLRHFFQEKR 153


>gi|114773341|ref|ZP_01450545.1| hypothetical protein OM2255_12392 [alpha proteobacterium HTCC2255]
 gi|114546275|gb|EAU49186.1| hypothetical protein OM2255_12392 [alpha proteobacterium HTCC2255]
          Length = 150

 Score =  199 bits (508), Expect = 9e-50,   Method: Composition-based stats.
 Identities = 83/149 (55%), Positives = 97/149 (65%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M     FM  A+ EA+ AA R E+PVGA+  +N +IIS AGNR RELKD TAHAEIL IR
Sbjct: 1   MNNFTSFMPIAIIEAKKAASRGEVPVGALIEINGEIISSAGNRTRELKDPTAHAEILVIR 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
             C IL  E L   +LYVTLEPC MCAAAIS  RI  LY+GA + K GGI  G   +   
Sbjct: 61  NACSILGVERLIGANLYVTLEPCPMCAAAISNTRIANLYFGARDIKSGGINQGPCIFNHP 120

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             HH PEIY GISE   R+++ DFFK +R
Sbjct: 121 QSHHKPEIYDGISELECRKLLLDFFKHKR 149


>gi|325130078|gb|EGC52865.1| tRNA-specific adenosine deaminase [Neisseria meningitidis
           OX99.30304]
 gi|325138115|gb|EGC60688.1| tRNA-specific adenosine deaminase [Neisseria meningitidis ES14902]
 gi|325142208|gb|EGC64629.1| tRNA-specific adenosine deaminase [Neisseria meningitidis 961-5945]
          Length = 163

 Score =  199 bits (508), Expect = 9e-50,   Method: Composition-based stats.
 Identities = 57/144 (39%), Positives = 81/144 (56%)

Query: 6   VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
            FM  ALE+A+ +AL  EIPVGAV V + KII+ A N      +V+ HAEI A+      
Sbjct: 18  HFMGLALEQAKLSALMGEIPVGAVIVSDGKIIASAHNTCIADCNVSRHAEINALAQAGSE 77

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           +    L   D+Y+TLEPC MCA+A+  ARIRR+ YGA+ PK G   +    +     +  
Sbjct: 78  MQNYRLDGCDIYITLEPCAMCASALIQARIRRVIYGAAEPKTGAAGSIVNLFADKRLNTH 137

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
             I  GI ++  R ++  FF+ +R
Sbjct: 138 TAIRGGILQEECRAVLSRFFQNKR 161


>gi|189499637|ref|YP_001959107.1| CMP/dCMP deaminase zinc-binding [Chlorobium phaeobacteroides BS1]
 gi|189495078|gb|ACE03626.1| CMP/dCMP deaminase zinc-binding [Chlorobium phaeobacteroides BS1]
          Length = 156

 Score =  199 bits (508), Expect = 9e-50,   Method: Composition-based stats.
 Identities = 56/146 (38%), Positives = 79/146 (54%), Gaps = 1/146 (0%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
           + FM  A  EA  A  + E+PVGAV    N  II R  N+   L D TAHAE++A+    
Sbjct: 4   SYFMEPAFREAIKAYEKKEVPVGAVVFDANGHIIGRGYNQVEALTDATAHAEMIALTSAM 63

Query: 64  RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123
             L  + L +  L VTLEPC MCA AI  A++ R+ +GA + K G              +
Sbjct: 64  ATLGSKYLSDCTLAVTLEPCPMCAGAIVNAKVGRVVFGAYDAKMGACGTVMNITASRDLN 123

Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149
           H PE+Y GI E +++ ++Q+FF+  R
Sbjct: 124 HQPEVYGGILEHKAQSLLQEFFRGLR 149


>gi|260592642|ref|ZP_05858100.1| tRNA-specific adenosine deaminase [Prevotella veroralis F0319]
 gi|260535412|gb|EEX18029.1| tRNA-specific adenosine deaminase [Prevotella veroralis F0319]
          Length = 150

 Score =  199 bits (508), Expect = 9e-50,   Method: Composition-based stats.
 Identities = 60/149 (40%), Positives = 84/149 (56%), Gaps = 5/149 (3%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +KK   FM  A++EA+ A    EIP+GAV V  ++II+RA N    L DVTAHAE+ AI 
Sbjct: 7   IKKDMYFMQRAIDEAKAAYREGEIPIGAVVVCRDRIIARAHNLTETLNDVTAHAEMQAIT 66

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
           +    L  + L +  LYVT+EPC MCA AI  A++ R+ YG  + K G        Y   
Sbjct: 67  IAESELGGKYLQDCTLYVTVEPCIMCAGAIGWAQLHRIVYGCPDIKRG-----YHEYAPK 121

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             H    +  G+ E+  + ++Q FF+ERR
Sbjct: 122 AFHPKANVTSGVLEEECKALMQRFFQERR 150


>gi|317481165|ref|ZP_07940240.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Bacteroides sp. 4_1_36]
 gi|316902661|gb|EFV24540.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Bacteroides sp. 4_1_36]
          Length = 146

 Score =  199 bits (508), Expect = 9e-50,   Method: Composition-based stats.
 Identities = 59/147 (40%), Positives = 80/147 (54%), Gaps = 5/147 (3%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
             + +M  AL EA  A  R E+PVGAV V  ++II+RA N    L DVTAHAE+ AI   
Sbjct: 4   DDSYYMKQALLEAHKAGERGEVPVGAVVVCKDRIIARAHNLTETLTDVTAHAEMQAITAA 63

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
              L  + L E  LYVT+EPC MCA AI+ A++ RL +GA + K G      Q Y     
Sbjct: 64  AATLGGKYLNECTLYVTVEPCVMCAGAIAWAQMGRLVFGAEDEKRG-----YQRYASQAL 118

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           H   ++  GI       ++++FF  +R
Sbjct: 119 HPKTQVVKGILADECAALMKEFFAAKR 145


>gi|168187922|ref|ZP_02622557.1| tRNA-specific adenosine deaminase [Clostridium botulinum C str.
           Eklund]
 gi|169294234|gb|EDS76367.1| tRNA-specific adenosine deaminase [Clostridium botulinum C str.
           Eklund]
          Length = 147

 Score =  199 bits (508), Expect = 9e-50,   Method: Composition-based stats.
 Identities = 60/149 (40%), Positives = 86/149 (57%), Gaps = 3/149 (2%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           MKK   FM  AL+EA+ A  ++E+PVGAV V N +II+ A N    L D TAHAE+LAI+
Sbjct: 1   MKK--KFMDIALDEAKLAMEKDEVPVGAVIVRNGEIIASAHNLRETLNDPTAHAEMLAIK 58

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
               +L    L E ++YVTLEPC MCA AI  +RIR++Y G  +P  G   +        
Sbjct: 59  KASSVLKNWRLNECEMYVTLEPCPMCAGAIIQSRIRKIYIGTIDPCAGCCGSVLNLTENI 118

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             + +  +    ++ R  +I+ +FFK +R
Sbjct: 119 YLNTALGVKW-FNDNRCSEILINFFKSKR 146


>gi|326577134|gb|EGE27028.1| tRNA-specific adenosine deaminase [Moraxella catarrhalis O35E]
          Length = 181

 Score =  199 bits (508), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 58/148 (39%), Positives = 81/148 (54%), Gaps = 1/148 (0%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
           +    M+ ALE A+  A   EIPVGAV V   +I+    N     +D TAHAEI+A+R  
Sbjct: 24  RDVEMMNRALEIAKQGAKFGEIPVGAVVVYEGRILGEGYNCPITTQDPTAHAEIVAVRRA 83

Query: 63  CRILSQEILP-EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
           C  L+   LP    LYVTLEPCTMC  A+  ARI  + +GA  PK G + +  +    A 
Sbjct: 84  CETLNNYRLPKGCILYVTLEPCTMCFGALIHARISHVVFGAFEPKAGVVISQLKLPEQAF 143

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H   +Y G+   +S  ++  FF++RR
Sbjct: 144 YNHRLSVYGGLLADKSSALLSGFFRQRR 171


>gi|319793607|ref|YP_004155247.1| cmp/dcmp deaminase zinc-binding protein [Variovorax paradoxus EPS]
 gi|315596070|gb|ADU37136.1| CMP/dCMP deaminase zinc-binding protein [Variovorax paradoxus EPS]
          Length = 368

 Score =  199 bits (508), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 45/126 (35%), Positives = 71/126 (56%)

Query: 24  IPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83
           +PVGAV V + ++I+   N      D +AHAEI A+R G   L    L   +L+VTLEPC
Sbjct: 25  VPVGAVLVKDGQVIATGRNTPVAQHDPSAHAEINALRAGASALGNYRLDGCELFVTLEPC 84

Query: 84  TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQD 143
            MCA A+  +R+ R+ +GA++PK G   +    +     +H  ++  G+  Q    ++Q 
Sbjct: 85  AMCAGAMLHSRLARVVFGATDPKTGAAGSVLDLFAEPRLNHRTQVQGGVLAQECSAVLQG 144

Query: 144 FFKERR 149
           FF++RR
Sbjct: 145 FFQQRR 150


>gi|116750214|ref|YP_846901.1| zinc-binding CMP/dCMP deaminase [Syntrophobacter fumaroxidans MPOB]
 gi|116699278|gb|ABK18466.1| tRNA-adenosine deaminase [Syntrophobacter fumaroxidans MPOB]
          Length = 158

 Score =  199 bits (508), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 56/150 (37%), Positives = 78/150 (52%), Gaps = 1/150 (0%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAI 59
           +   + FM  ALEEA      +E+PVGAV      ++++R  NR   L D TAHAEIL +
Sbjct: 4   LTDHDYFMGIALEEALAGREESEVPVGAVLAGPGGEVLARGHNRPIALCDPTAHAEILVL 63

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
           R          LP   LYVTLEPC MC  A+  AR+R L +GA +PK G   +      +
Sbjct: 64  REAAAAAGNYRLPGSVLYVTLEPCAMCVGALLQARVRTLVFGAPDPKSGAAGSVVDLTKV 123

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
              +H  E+  GI      ++++ FF +RR
Sbjct: 124 DAFNHYVEVIGGIRMAECSELLKKFFLDRR 153


>gi|308235514|ref|ZP_07666251.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Gardnerella vaginalis ATCC 14018]
 gi|311114084|ref|YP_003985305.1| putative cytosine deaminase [Gardnerella vaginalis ATCC 14019]
 gi|310945578|gb|ADP38282.1| possible cytosine deaminase [Gardnerella vaginalis ATCC 14019]
          Length = 154

 Score =  199 bits (508), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 52/143 (36%), Positives = 68/143 (47%), Gaps = 1/143 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  AL  AQ A+   E+PVGAV V     II R  N      D  +HAE+LAI+      
Sbjct: 12  MQEALRLAQVASDCGEVPVGAVVVDGSGVIIGRGSNLRERDSDPLSHAEVLAIKQAAESK 71

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  L VTLEPC MCA AI    I+R+ +GA + K G   +             P
Sbjct: 72  KSWNLSDCTLVVTLEPCPMCAGAILQTHIKRVVFGAWDSKLGACGSVWDILRDPHVGSHP 131

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           +++  + E    QI+ DFFK  R
Sbjct: 132 QVFGSVCESECVQILSDFFKNCR 154


>gi|88801642|ref|ZP_01117170.1| putative cytosine/adenosine deaminase [Polaribacter irgensii 23-P]
 gi|88782300|gb|EAR13477.1| putative cytosine/adenosine deaminase [Polaribacter irgensii 23-P]
          Length = 149

 Score =  199 bits (508), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 65/147 (44%), Positives = 83/147 (56%), Gaps = 6/147 (4%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
               FM  A +EA+NA  + EIPVGAV VL ++II+RA N    L DVTAHAE+ A    
Sbjct: 6   DDIYFMKKAFQEAENAFDKGEIPVGAVIVLKDQIIARAHNLTETLNDVTAHAEMQAFTSA 65

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
              L  + L E  LYVTLEPC MCA A   A+I ++ YGAS P+ G  +N        T 
Sbjct: 66  ADFLGGKYLKECVLYVTLEPCQMCAGASYWAQIGKIVYGASEPERG-FKNL-----QTTL 119

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           H   ++  GI E    QI++ FF E+R
Sbjct: 120 HPKTKVIGGILENECSQILKRFFIEKR 146


>gi|325921804|ref|ZP_08183621.1| tRNA-adenosine deaminase [Xanthomonas gardneri ATCC 19865]
 gi|325547681|gb|EGD18718.1| tRNA-adenosine deaminase [Xanthomonas gardneri ATCC 19865]
          Length = 165

 Score =  199 bits (507), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 51/148 (34%), Positives = 77/148 (52%), Gaps = 2/148 (1%)

Query: 4   GNVFMSCALEEAQNA-ALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRM 61
              +M  AL+ A+ A    +EIPVGA+ V  +  ++    N N    D TAHAEI+A+R 
Sbjct: 11  DQQWMQRALQLAERAERDYDEIPVGALLVDADGNVLGEGWNFNIASHDPTAHAEIMAMRE 70

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
             R L+   L    LYVTLEPC MCA A+  ARI R+ + AS+PK G   +         
Sbjct: 71  AGRRLANHRLIGCTLYVTLEPCAMCAMAMIHARIARVVFAASDPKTGACGSVFDLLADPR 130

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H  ++  G+    +   + ++F+ +R
Sbjct: 131 HNHRVQVSGGVLAAEASLRLTNYFRAKR 158


>gi|283768643|ref|ZP_06341555.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Bulleidia extructa W1219]
 gi|283105035|gb|EFC06407.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Bulleidia extructa W1219]
          Length = 195

 Score =  199 bits (507), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 51/148 (34%), Positives = 84/148 (56%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
            +   +MS A+EEA+ A L +E+P+G V V ++ +I+R  N      +   HAE+ AI  
Sbjct: 43  NREEYYMSLAIEEAKKAELSDEVPIGCVIVCDDMVIARNHNHKESKNNAIYHAEVEAILE 102

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
             ++ +   L + DLYVTLEPC MC  AI  +R+R +YYGA + K G ++       +  
Sbjct: 103 ASKVKNNWNLNDCDLYVTLEPCMMCTGAILNSRLRTIYYGADSFKAGFLKTKINLEAIRG 162

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H P I  G+ E+   Q++  +F+++R
Sbjct: 163 LNHYPVIKKGVLERECAQLLSRYFQKKR 190


>gi|163838825|ref|YP_001623230.1| tRNA-specific adenosine deaminase [Renibacterium salmoninarum ATCC
           33209]
 gi|162952301|gb|ABY21816.1| tRNA-specific adenosine deaminase [Renibacterium salmoninarum ATCC
           33209]
          Length = 161

 Score =  199 bits (507), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 53/149 (35%), Positives = 77/149 (51%), Gaps = 1/149 (0%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIR 60
            K   +M  AL EAQ A    ++P+GAV +  +  ++    NR     D TAHAE+LA+R
Sbjct: 11  DKFRSWMGAALVEAQAALQTEDVPIGAVVLDASGNVVGTGRNRREADGDPTAHAEVLALR 70

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
                     L    L VTLEPC MCA AI LA++ R+ +GA + K G   +  +     
Sbjct: 71  AAAEATGSWRLDGCTLVVTLEPCAMCAGAIVLAKVPRVVFGAWDAKAGAAGSVFEILREP 130

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  E+YPG+ E  S  ++++FF   R
Sbjct: 131 RLNHWVEVYPGVREAESAILLREFFAGHR 159


>gi|209548083|ref|YP_002280000.1| CMP/dCMP deaminase zinc-binding [Rhizobium leguminosarum bv.
           trifolii WSM2304]
 gi|209533839|gb|ACI53774.1| CMP/dCMP deaminase zinc-binding [Rhizobium leguminosarum bv.
           trifolii WSM2304]
          Length = 145

 Score =  199 bits (507), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 88/142 (61%), Positives = 110/142 (77%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  ALEEA+ A  R E+P+GAV V+++  +SR+GNR REL DVTAHAEI AIR+ C  L 
Sbjct: 1   MEMALEEARAAGERGEVPIGAVVVIDDIAVSRSGNRTRELNDVTAHAEIAAIRLACEGLG 60

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
           QE L   DLYVTLEPCTMCAAAIS ARIRRLYYGA +PKGGG++NG +FY   TCHH+PE
Sbjct: 61  QERLVGADLYVTLEPCTMCAAAISFARIRRLYYGAEDPKGGGVDNGVRFYAQPTCHHAPE 120

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
           +Y G +E +S +I++ FF ++R
Sbjct: 121 VYSGFNEVQSAEILRTFFSQKR 142


>gi|49473908|ref|YP_031950.1| nitrogen fixation protein [Bartonella quintana str. Toulouse]
 gi|49239411|emb|CAF25749.1| Nitrogen fixation protein [Bartonella quintana str. Toulouse]
          Length = 148

 Score =  199 bits (507), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 78/142 (54%), Positives = 97/142 (68%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  AL EAQ A  ++E+PVGAV      II+R GN  +   D T HAE+  IRM C    
Sbjct: 6   MEIALLEAQWAEKKDEVPVGAVITHGQSIIARTGNYIKAAYDPTGHAEMRVIRMACETFQ 65

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
            E LP+ DLYVTLEPC MCAAAIS ARIRRLYY  S+PKGG IE+G +FY  +TCHH PE
Sbjct: 66  SERLPDCDLYVTLEPCAMCAAAISFARIRRLYYAISDPKGGAIEHGPRFYQQSTCHHRPE 125

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
           +Y G  E+ + Q+++DFF ++R
Sbjct: 126 VYSGFKEKEAAQLLKDFFAQKR 147


>gi|189347424|ref|YP_001943953.1| CMP/dCMP deaminase zinc-binding [Chlorobium limicola DSM 245]
 gi|189341571|gb|ACD90974.1| CMP/dCMP deaminase zinc-binding [Chlorobium limicola DSM 245]
          Length = 152

 Score =  199 bits (507), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 56/150 (37%), Positives = 77/150 (51%), Gaps = 1/150 (0%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAI 59
           M   N +M  A  EA  A  + E+PVGAV    N  I  R  N+   L D TAHAE++A+
Sbjct: 1   MHNLNFYMEQAFREALKAYEKKEVPVGAVVFDSNGNIAGRGHNQVEALSDATAHAEMIAL 60

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
                 L  + L    L VT+EPC MCA AI  A++ R+ +GA +PK G           
Sbjct: 61  TSAMATLGSKYLDACTLAVTMEPCPMCAGAIVNAKVGRVIFGAYDPKMGASGTVLNITGC 120

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
              +H PE+  GI E +  ++++DFF E R
Sbjct: 121 RELNHQPEVIGGIMENKCSELLRDFFSELR 150


>gi|311897119|dbj|BAJ29527.1| putative deaminase [Kitasatospora setae KM-6054]
          Length = 179

 Score =  199 bits (507), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 50/143 (34%), Positives = 72/143 (50%), Gaps = 1/143 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGA-VAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  A+EEA  A    ++PVGA V   +  ++ R  N    + D T HAE++AIR     +
Sbjct: 37  MRLAIEEAALATATGDVPVGAFVLGPDGTVLGRGHNVREAVGDPTGHAEVVAIRAAAAEV 96

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
            +  L    L VTLEPCTMCA AI L+R+ R+ +GA +PK G   +          +H P
Sbjct: 97  GEWRLSGCTLVVTLEPCTMCAGAIVLSRLARVVFGAYDPKAGAAGSLFDVVRDNRLNHRP 156

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+  G+        +  FF  +R
Sbjct: 157 EVIGGVLADACTAQLLAFFDTQR 179


>gi|313902768|ref|ZP_07836165.1| tRNA-adenosine deaminase [Thermaerobacter subterraneus DSM 13965]
 gi|313466888|gb|EFR62405.1| tRNA-adenosine deaminase [Thermaerobacter subterraneus DSM 13965]
          Length = 200

 Score =  199 bits (507), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 56/128 (43%), Positives = 70/128 (54%)

Query: 22  NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81
            E+PVGAVAV  + II+R  N    L D TAHAEIL +R     L    L  V LYVTLE
Sbjct: 46  GEVPVGAVAVYQDAIIARGHNLRERLGDPTAHAEILVLREAAARLGGWRLEGVTLYVTLE 105

Query: 82  PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141
           PC MCA AI LAR+ RL YGA +PK G   +          +H  E+  G+    S  ++
Sbjct: 106 PCPMCAGAIVLARVPRLVYGARDPKAGAAGSLMNLVQHDRLNHRVELRSGVLADASAALL 165

Query: 142 QDFFKERR 149
           + FF+  R
Sbjct: 166 RGFFRRLR 173


>gi|254479893|ref|ZP_05093141.1| Cytidine and deoxycytidylate deaminase zinc-binding region domain
           protein [marine gamma proteobacterium HTCC2148]
 gi|214039455|gb|EEB80114.1| Cytidine and deoxycytidylate deaminase zinc-binding region domain
           protein [marine gamma proteobacterium HTCC2148]
          Length = 153

 Score =  199 bits (507), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 52/147 (35%), Positives = 77/147 (52%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
           +   +M  AL  A  A    E+P+GAV V + +++    N     KD TAHAE++A+R  
Sbjct: 6   EHEQWMRRALALADRAGNEGEVPIGAVIVKDGQLLGEGWNSVIAFKDPTAHAEVVAMRDA 65

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
            ++     LP   +YVTLEPCTMCA A+  AR+  L + A  PK G + +          
Sbjct: 66  AQMTGNYRLPGSTVYVTLEPCTMCAGAMIHARVAELVFAAKEPKAGVVCSTCSLLDEPRY 125

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H      G+  + SR+ +Q FF+ERR
Sbjct: 126 NHRIRWQGGVLAEMSRERLQAFFRERR 152


>gi|126657691|ref|ZP_01728845.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [Cyanothece
           sp. CCY0110]
 gi|126620908|gb|EAZ91623.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [Cyanothece
           sp. CCY0110]
          Length = 163

 Score =  199 bits (507), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 53/148 (35%), Positives = 72/148 (48%), Gaps = 1/148 (0%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRM 61
               +M  AL+ A+ AA   ++PVGAV +     I++   N      D T HAEI+AIR 
Sbjct: 12  THRHWMKEALKLAEIAANLGDVPVGAVIINRQGNILAEGYNSKEVNHDPTGHAEIIAIRQ 71

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
             + L    L E  LYVTLEPC MCA AI  +R+  L YG  + K G I           
Sbjct: 72  ASQTLKSWHLEECTLYVTLEPCIMCAGAIIQSRLGLLVYGVDDLKSGSIRTALNLPDSVA 131

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H   +  GI E   RQ ++ +F  +R
Sbjct: 132 SNHHLSVLSGILEAECRQQLKKWFINKR 159


>gi|332162680|ref|YP_004299257.1| tRNA-specific adenosine deaminase [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|325666910|gb|ADZ43554.1| tRNA-specific adenosine deaminase [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|330860305|emb|CBX70619.1| tRNA-specific adenosine deaminase [Yersinia enterocolitica W22703]
          Length = 196

 Score =  199 bits (507), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 57/147 (38%), Positives = 78/147 (53%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
               +M  AL  A  A    E+PVGA+ VL+N++I    NR     D TAHAEI+A+R G
Sbjct: 31  SDEYWMQRALALALRAQAEGEVPVGAILVLDNQVIGEGWNRPIRDNDPTAHAEIMALRQG 90

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
            +++    L +  LYVTLEPC MCA A+  +RIRRL YGA++ K G   +          
Sbjct: 91  GQVVQNYRLIDATLYVTLEPCVMCAGAMVHSRIRRLVYGANDLKTGAAGSLVDILRHPGM 150

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H  EI  G+        +  FF+ RR
Sbjct: 151 NHQIEITAGVMADVCAHQLSAFFRVRR 177


>gi|84495278|ref|ZP_00994397.1| possible cytidine and deoxycytidylate deaminase [Janibacter sp.
           HTCC2649]
 gi|84384771|gb|EAQ00651.1| possible cytidine and deoxycytidylate deaminase [Janibacter sp.
           HTCC2649]
          Length = 143

 Score =  199 bits (507), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 54/143 (37%), Positives = 71/143 (49%), Gaps = 1/143 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNK-IISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  AL+ A  A    ++PVGAV +     +I    N      D TAHAE++A+R   R  
Sbjct: 1   MRHALDLAVRAGSAGDVPVGAVVLDPGGAVIGEGWNLREVDADPTAHAEVVALRAAARHT 60

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  L VTLEPC MCA A  LARI R+  GA +PK G   +           H  
Sbjct: 61  GSWRLEDCTLVVTLEPCPMCAGAAMLARISRIVLGAWDPKLGATGSVWDVVRDRRATHRI 120

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+  G+ E  + Q++ DFF ERR
Sbjct: 121 EVVGGVLEAEASQLLLDFFGERR 143


>gi|226952955|ref|ZP_03823419.1| deaminase [Acinetobacter sp. ATCC 27244]
 gi|294650537|ref|ZP_06727894.1| cytosine deaminase [Acinetobacter haemolyticus ATCC 19194]
 gi|226836276|gb|EEH68659.1| deaminase [Acinetobacter sp. ATCC 27244]
 gi|292823534|gb|EFF82380.1| cytosine deaminase [Acinetobacter haemolyticus ATCC 19194]
          Length = 174

 Score =  199 bits (507), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 59/148 (39%), Positives = 79/148 (53%), Gaps = 1/148 (0%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
               +M  A E+A  AA + EIPVGAV V  +KII    N    L D +AHAEI A+RM 
Sbjct: 12  DDEYWMQFAYEQAALAAEQGEIPVGAVIVSQSKIIGAGYNAPILLSDPSAHAEIQALRMA 71

Query: 63  CRILSQEILP-EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
           C+ +    LP +  LYVTLEPCTMC  A+  ARI+R+ +    PK G + +  Q      
Sbjct: 72  CQSIQNYRLPEDATLYVTLEPCTMCVGALIHARIQRVVFATPEPKAGSLVSARQLLDSGY 131

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H      G  + +    + DFFK+RR
Sbjct: 132 YNHKFVFEHGCMQAKCSAQLSDFFKQRR 159


>gi|238650838|ref|YP_002916693.1| tRNA-specific adenosine deaminase [Rickettsia peacockii str.
           Rustic]
 gi|238624936|gb|ACR47642.1| tRNA-specific adenosine deaminase [Rickettsia peacockii str.
           Rustic]
          Length = 168

 Score =  199 bits (507), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 67/148 (45%), Positives = 97/148 (65%), Gaps = 2/148 (1%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVL--NNKIISRAGNRNRELKDVTAHAEILAIRM 61
            N FM  AL++A+ A  +NE+PVGAV V   N KII+   N   E  +   HAEI+AI  
Sbjct: 12  NNFFMEQALKQAKIAFDKNEVPVGAVVVDRLNQKIIASTHNNTEEKNNALYHAEIIAINK 71

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
            C ++S + L + D+YVTLEPC MCAAAI+ +R++RL+YGAS+ K G +E+  +++  + 
Sbjct: 72  ACNLISSKNLNDYDIYVTLEPCAMCAAAIAHSRLKRLFYGASDSKHGAVESNLRYFNSSA 131

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
           C H PEIY GI  + S  ++++FFK  R
Sbjct: 132 CFHRPEIYSGILAEDSGLLMKEFFKRIR 159


>gi|34581121|ref|ZP_00142601.1| cytosine deaminase [Rickettsia sibirica 246]
 gi|229587195|ref|YP_002845696.1| Cytosine deaminase [Rickettsia africae ESF-5]
 gi|28262506|gb|EAA26010.1| cytosine deaminase [Rickettsia sibirica 246]
 gi|228022245|gb|ACP53953.1| Cytosine deaminase [Rickettsia africae ESF-5]
          Length = 168

 Score =  199 bits (507), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 67/148 (45%), Positives = 97/148 (65%), Gaps = 2/148 (1%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVL--NNKIISRAGNRNRELKDVTAHAEILAIRM 61
            N FM  AL++A+ A  +NE+PVGAV V   N KII+   N   E  +   HAEI+AI  
Sbjct: 12  NNFFMEQALKQAKIAFDKNEVPVGAVVVDRLNQKIIASTHNNTEEKNNALYHAEIIAINE 71

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
            C ++S + L + D+YVTLEPC MCAAAI+ +R++RL+YGAS+ K G +E+  +++  + 
Sbjct: 72  ACNLISSKNLNDYDIYVTLEPCAMCAAAIAHSRLKRLFYGASDSKHGAVESNLRYFNSSA 131

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
           C H PEIY GI  + S  ++++FFK  R
Sbjct: 132 CFHRPEIYSGILAEDSGLLMKEFFKRIR 159


>gi|157829120|ref|YP_001495362.1| cytosine deaminase [Rickettsia rickettsii str. 'Sheila Smith']
 gi|165933844|ref|YP_001650633.1| tRNA-specific adenosine deaminase [Rickettsia rickettsii str. Iowa]
 gi|157801601|gb|ABV76854.1| cytosine deaminase [Rickettsia rickettsii str. 'Sheila Smith']
 gi|165908931|gb|ABY73227.1| tRNA-specific adenosine deaminase [Rickettsia rickettsii str. Iowa]
          Length = 168

 Score =  199 bits (507), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 68/148 (45%), Positives = 97/148 (65%), Gaps = 2/148 (1%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVL--NNKIISRAGNRNRELKDVTAHAEILAIRM 61
            N FM  AL++A+ A  +NE+PVGAV V   N KII+   N   E  +   HAEI+AI  
Sbjct: 12  NNFFMEQALKQAKIAFDKNEVPVGAVVVDRLNQKIIASTHNNTEEKNNALYHAEIIAINE 71

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
            C ++S + L + D+YVTLEPC MCAAAI+ +R++RL+YGAS+ K G IE+  +++  + 
Sbjct: 72  ACNLISSKNLNDYDIYVTLEPCAMCAAAIAHSRLKRLFYGASDSKHGAIESNLRYFNSSA 131

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
           C H PEIY GI  + S  ++++FFK  R
Sbjct: 132 CFHRPEIYSGILAEDSGLLMKEFFKRIR 159


>gi|315223581|ref|ZP_07865436.1| tRNA-specific adenosine deaminase [Capnocytophaga ochracea F0287]
 gi|314946497|gb|EFS98491.1| tRNA-specific adenosine deaminase [Capnocytophaga ochracea F0287]
          Length = 158

 Score =  199 bits (507), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 58/149 (38%), Positives = 82/149 (55%), Gaps = 6/149 (4%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M     FM  ALEEAQ A   +EIPVGA+  ++N+II++A N    L DVTAHAE+ AI 
Sbjct: 15  MNTDEYFMQKALEEAQLAFEEDEIPVGAIITIDNRIIAKAHNLTERLNDVTAHAEMQAIT 74

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
           M    L  + L    +Y+TLEPC MCA A+  +++ RL Y A +   G    G       
Sbjct: 75  MAAHYLGGKYLTGCTMYLTLEPCAMCAGALYWSQLSRLVYAAPDTHRGYSVMG------G 128

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             H   E+  GI  Q +  +++ FF+++R
Sbjct: 129 KLHPKTEVVTGILSQEATALLKQFFQQKR 157


>gi|167648591|ref|YP_001686254.1| CMP/dCMP deaminase zinc-binding [Caulobacter sp. K31]
 gi|167351021|gb|ABZ73756.1| CMP/dCMP deaminase zinc-binding [Caulobacter sp. K31]
          Length = 146

 Score =  199 bits (507), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 67/144 (46%), Positives = 90/144 (62%), Gaps = 2/144 (1%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLN--NKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M+ AL+EA+ AA   E PVGAV +     +I++RAGN      D TAHAEI AIR+    
Sbjct: 1   MAVALDEARAAAQAGETPVGAVILDPASGEILARAGNGPIGAHDPTAHAEISAIRLAAAK 60

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           L    L ++ L VTLEPC MCA AIS ARI R+ +GA +PKGG + +G +F+   TCH  
Sbjct: 61  LGNYRLTDLTLVVTLEPCAMCAGAISHARIGRVVFGAEDPKGGAVVHGPRFFAQPTCHWR 120

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
           PE+  G+  Q S  +++ FF+ RR
Sbjct: 121 PEVTGGVMAQESADLLRGFFRARR 144


>gi|241895205|ref|ZP_04782501.1| tRNA-adenosine deaminase [Weissella paramesenteroides ATCC 33313]
 gi|241871511|gb|EER75262.1| tRNA-adenosine deaminase [Weissella paramesenteroides ATCC 33313]
          Length = 175

 Score =  199 bits (507), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 55/145 (37%), Positives = 83/145 (57%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           + FM  AL EA+ AA+  E+P+GAV V + +++SRA N    ++D + HAE  AI    R
Sbjct: 11  DYFMGLALAEARKAAMIGEVPIGAVVVQDGQVVSRAFNLREHMQDGSQHAEYQAIIEANR 70

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
            L    LP+  L+VTLEPC MCA  I   R+  +YYGA +PK GG+ +  +  T    +H
Sbjct: 71  QLHSWRLPDAQLFVTLEPCIMCAGLIQQTRLTDVYYGADDPKAGGVTSMYELLTDERLNH 130

Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149
              ++ G+    +  +++ FFK  R
Sbjct: 131 QVNVHAGVRADEASSLLKQFFKAVR 155


>gi|121998459|ref|YP_001003246.1| CMP/dCMP deaminase, zinc-binding [Halorhodospira halophila SL1]
 gi|121589864|gb|ABM62444.1| CMP/dCMP deaminase, zinc-binding protein [Halorhodospira halophila
           SL1]
          Length = 142

 Score =  199 bits (507), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 58/142 (40%), Positives = 82/142 (57%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M+ ALE A+ AA + E+PVGAV V +  ++    N+    +D TAHAEI A+R   +   
Sbjct: 1   MARALELARYAADQGEVPVGAVVVRDGVLLGEGRNQPIVSRDPTAHAEINALRAAGQAAG 60

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
              LP   LYVTLEPC MCA A+  ARI RL YGA++PK G          L   +H  E
Sbjct: 61  AYRLPGATLYVTLEPCFMCAGALIHARIERLVYGAADPKTGACGGQFDLLGLPGHNHRVE 120

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
           +  G+S + +  ++++FF+ RR
Sbjct: 121 VTAGVSGEAAAGLLREFFRARR 142


>gi|319405143|emb|CBI78749.1| Cytosine/adenosine deaminase [Bartonella sp. AR 15-3]
          Length = 150

 Score =  198 bits (506), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 76/142 (53%), Positives = 100/142 (70%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  AL EAQ+A  ++E+PVGAV      II+RAGN  ++  D T HAE+  IR+ C+I  
Sbjct: 6   MEIALLEAQSAKKQDEVPVGAVITHGQTIIARAGNYTKKSHDPTGHAEMRVIRIACQIFK 65

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
            E +PE DLYVTLEPCTMCAAAIS ARIR LYY   + KGG IE+G++FY  +TCHH P 
Sbjct: 66  SERIPECDLYVTLEPCTMCAAAISFARIRNLYYATKDSKGGAIEHGSRFYQQSTCHHKPN 125

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
           +Y G  E+ + Q+++DFF ++R
Sbjct: 126 VYSGFKEKEASQLLKDFFIQKR 147


>gi|86738996|ref|YP_479396.1| tRNA-adenosine deaminase [Frankia sp. CcI3]
 gi|86565858|gb|ABD09667.1| tRNA-adenosine deaminase [Frankia sp. CcI3]
          Length = 176

 Score =  198 bits (506), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 54/143 (37%), Positives = 74/143 (51%), Gaps = 1/143 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  AL EA+ A    ++PVGA+ V  +  ++    N      D TAHAE++A+R   R  
Sbjct: 29  MGLALREARLAPDHADVPVGALVVTEDGTVLGLGHNERERGADPTAHAEMIALRAAARRT 88

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               LP   L VTLEPCTMCA A+ LAR+ RL YGA + K G + +          +H P
Sbjct: 89  GSWRLPGATLVVTLEPCTMCAGALVLARVDRLVYGAVDEKAGAVGSLWDVVRDRRLNHRP 148

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+  GI       ++ +FF  RR
Sbjct: 149 EVVAGIRADECGALLAEFFAARR 171


>gi|284028320|ref|YP_003378251.1| CMP/dCMP deaminase zinc-binding protein [Kribbella flavida DSM
           17836]
 gi|283807613|gb|ADB29452.1| CMP/dCMP deaminase zinc-binding protein [Kribbella flavida DSM
           17836]
          Length = 144

 Score =  198 bits (506), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 54/143 (37%), Positives = 76/143 (53%), Gaps = 1/143 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  AL EA++A    ++P+GAV V    ++I R  N      D TAHAE+LAIR   R +
Sbjct: 1   MELALAEAEHARGSADVPIGAVVVDAGGEVIGRGHNEREATGDPTAHAEVLAIRAAARHV 60

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
            +  L    L VTLEPCTMCA AI L+R+ RL + A + K G + +          +H P
Sbjct: 61  GEWRLTGCTLVVTLEPCTMCAGAIVLSRLDRLVFAAYDEKAGAVGSLWDVVRDRRLNHRP 120

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+  G+    +   ++DFF   R
Sbjct: 121 EVVGGVLADEAGARLRDFFIGHR 143


>gi|283457271|ref|YP_003361841.1| cytosine/adenosine deaminase [Rothia mucilaginosa DY-18]
 gi|283133256|dbj|BAI64021.1| cytosine/adenosine deaminase [Rothia mucilaginosa DY-18]
          Length = 175

 Score =  198 bits (506), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 55/149 (36%), Positives = 74/149 (49%), Gaps = 1/149 (0%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIR 60
            + + +M+ AL E   A  R EIP+GAV V     II  AGN   +  D +AHAE+ AIR
Sbjct: 26  SEHSEWMAHALVEGAAAGERGEIPIGAVVVDEQGVIIGSAGNTREQEHDPSAHAEVNAIR 85

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
                  Q  L    L VT+EPC MCA  I  +R+  + +GA   K G   +        
Sbjct: 86  QAAACRGQWRLDGCTLVVTVEPCLMCAGTILASRVSTVVFGAWEEKTGAAGSRYDVLRDG 145

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
               +PE+Y G+      Q++ DFFKERR
Sbjct: 146 RVAPAPEVYAGVRADECAQLMVDFFKERR 174


>gi|255527107|ref|ZP_05393995.1| CMP/dCMP deaminase zinc-binding [Clostridium carboxidivorans P7]
 gi|296187896|ref|ZP_06856289.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Clostridium carboxidivorans P7]
 gi|255509209|gb|EET85561.1| CMP/dCMP deaminase zinc-binding [Clostridium carboxidivorans P7]
 gi|296047517|gb|EFG86958.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Clostridium carboxidivorans P7]
          Length = 145

 Score =  198 bits (506), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 53/149 (35%), Positives = 79/149 (53%), Gaps = 4/149 (2%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           MK    FM  A++EA+ + +  E+PVG V V +N II+RA N    L+D  AHAEILAI+
Sbjct: 1   MKN---FMREAIKEAEKSLVLGEVPVGVVIVKDNIIIARAHNLRETLQDTLAHAEILAIK 57

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              +  +   L    +YVTLEPC MCA AI  +RI  +Y G   P  G   +        
Sbjct: 58  EASQYTNNWRLSGCSMYVTLEPCPMCAGAILQSRISNVYIGTFEPNTGACGSVINILQND 117

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +    +Y    +++   I+++FF ++R
Sbjct: 118 NLNRWTNVYWNY-DEKCSNILEEFFSKKR 145


>gi|218258211|ref|ZP_03474613.1| hypothetical protein PRABACTJOHN_00267 [Parabacteroides johnsonii
           DSM 18315]
 gi|218225660|gb|EEC98310.1| hypothetical protein PRABACTJOHN_00267 [Parabacteroides johnsonii
           DSM 18315]
          Length = 147

 Score =  198 bits (506), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 59/147 (40%), Positives = 83/147 (56%), Gaps = 5/147 (3%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
               FM  AL EA+ AA   E+PVGAV V NN+II+RA N+   L D TAHAE+LAI   
Sbjct: 6   NDEYFMKQALIEARAAAKEGEVPVGAVIVCNNRIIARAHNQTERLNDPTAHAEMLAITAA 65

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
             +L  + L    LYVT+EPC MCA AI  +++ ++ YGA++ K G      Q Y     
Sbjct: 66  VGVLGAKYLTGCSLYVTVEPCVMCAGAIGWSQLSKIVYGATDEKRG-----FQQYAPKAL 120

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           H    +  G+ E    + +++FF+ +R
Sbjct: 121 HPKSTVKKGVLENECAEEMRNFFQRKR 147


>gi|58698581|ref|ZP_00373480.1| cytidine and deoxycytidylate deaminase family protein [Wolbachia
           endosymbiont of Drosophila ananassae]
 gi|58534906|gb|EAL59006.1| cytidine and deoxycytidylate deaminase family protein [Wolbachia
           endosymbiont of Drosophila ananassae]
          Length = 148

 Score =  198 bits (506), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 72/144 (50%), Positives = 93/144 (64%), Gaps = 8/144 (5%)

Query: 6   VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
            +M  A+E+A+ A   +E+P+GAV V  + IIS A N      D TAHAE+LAIR     
Sbjct: 12  QYMELAIEQAKLAQKNDEVPIGAVIVSGDNIISSAHN---ISSDPTAHAEMLAIRQA--- 65

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
            S   L + D+YVTLEPC MCA AIS ARI+RLY+GA NPKGGGIENG + +    C H 
Sbjct: 66  FSTSTLCDTDMYVTLEPCPMCAQAISFARIKRLYFGAYNPKGGGIENGAKIFQF--CSHI 123

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
           PE+Y GI E     +++DFF++ R
Sbjct: 124 PEVYGGILETECSFLLKDFFEKLR 147


>gi|329957514|ref|ZP_08297989.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Bacteroides clarus YIT 12056]
 gi|328522391|gb|EGF49500.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Bacteroides clarus YIT 12056]
          Length = 144

 Score =  198 bits (506), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 60/147 (40%), Positives = 78/147 (53%), Gaps = 5/147 (3%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
               +M  AL EAQ A  R E+PVGAV V  ++II+RA N    L DVTAHAE+ AI   
Sbjct: 2   TDTDYMKQALLEAQKAGERGEVPVGAVVVCKDRIIARAHNLTETLTDVTAHAEMQAITAA 61

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
              L  + L E  LYVT+EPC MCA AI+ A+  RL +GA + K G      Q Y     
Sbjct: 62  AATLGGKYLNECTLYVTVEPCVMCAGAIAWAQTGRLVFGAEDEKRG-----YQRYAPQAL 116

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           H    +  G+       +++DFF  +R
Sbjct: 117 HPKTSVVKGVLADECAALMKDFFAAKR 143


>gi|190574881|ref|YP_001972726.1| putative cytidine and deoxycytidylate deaminase [Stenotrophomonas
           maltophilia K279a]
 gi|190012803|emb|CAQ46432.1| putative cytidine and deoxycytidylate deaminase [Stenotrophomonas
           maltophilia K279a]
          Length = 174

 Score =  198 bits (506), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 57/148 (38%), Positives = 83/148 (56%), Gaps = 2/148 (1%)

Query: 4   GNVFMSCALEEAQNAALR-NEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRM 61
              +M  AL  A+ A    +EIPVGAV V  + +++    N N    D +AHAEI+A+R 
Sbjct: 13  DEHWMRHALALAERAQREFDEIPVGAVLVGADGQLLGEGWNLNIASHDPSAHAEIVAMRA 72

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
           G ++L+   L    LYVTLEPC MCA AI  AR+ RL YGAS+PK G   +       A 
Sbjct: 73  GGKLLANHRLLGSTLYVTLEPCAMCAMAIVHARVSRLVYGASDPKTGACGSVFDLLGDAR 132

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H  EI+ G+  + +   + ++F+ +R
Sbjct: 133 HNHRVEIHGGVLAKEASTRLTNYFRAKR 160


>gi|114046813|ref|YP_737363.1| tRNA-adenosine deaminase [Shewanella sp. MR-7]
 gi|113888255|gb|ABI42306.1| tRNA-adenosine deaminase [Shewanella sp. MR-7]
          Length = 222

 Score =  198 bits (506), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 49/146 (33%), Positives = 69/146 (47%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
              +M  A+  A+ A    E+PVGAV V   + I+   N +    D  AHAEI  +R   
Sbjct: 59  DEHWMRVAMAMAEKAEAAGEVPVGAVLVKEGQQIAAGYNLSISEHDPCAHAEIQCLRAAG 118

Query: 64  RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123
           + +    L +  LYVTLEPC MCA A+  +RI R+ +GA + K G              +
Sbjct: 119 QTIENYRLLDTTLYVTLEPCAMCAGAMVHSRIARVVFGAKDEKTGAAGTVLNLLQHPAFN 178

Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149
           H  E+  G+  Q     +  FFK RR
Sbjct: 179 HQVEVASGVLAQDCADQLSRFFKRRR 204


>gi|86132518|ref|ZP_01051112.1| cytidine/deoxycytidylate deaminase family protein [Dokdonia
           donghaensis MED134]
 gi|85817079|gb|EAQ38263.1| cytidine/deoxycytidylate deaminase family protein [Dokdonia
           donghaensis MED134]
          Length = 149

 Score =  198 bits (506), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 63/147 (42%), Positives = 85/147 (57%), Gaps = 6/147 (4%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
               FM  AL+EAQ A  + EIPVGAV V++N II+RA N    L DVTAHAE+ AI   
Sbjct: 6   DDTYFMKKALQEAQAAFDQGEIPVGAVVVIDNMIIARAHNLTERLTDVTAHAEMQAITSA 65

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
              +  + L +  LYVTLEPC MCA A+  ++I R+ YGAS+ + G  + GT      T 
Sbjct: 66  SNYIGGKYLQQCTLYVTLEPCQMCAGALYWSQIGRIVYGASDERRGYEKMGT------TL 119

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           H   ++  GI      QI++ FF ++R
Sbjct: 120 HPKTKVERGILAHECEQIMKRFFIDKR 146


>gi|284928847|ref|YP_003421369.1| tRNA-adenosine deaminase [cyanobacterium UCYN-A]
 gi|284809306|gb|ADB95011.1| tRNA-adenosine deaminase [cyanobacterium UCYN-A]
          Length = 162

 Score =  198 bits (506), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 57/149 (38%), Positives = 78/149 (52%), Gaps = 1/149 (0%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIR 60
           K  + +M  AL  AQ A    ++PVGAV V N   +I++  N  +   D T HAEI+AIR
Sbjct: 6   KIHHQWMKKALSLAQKAENLEDVPVGAVIVDNYGNLIAQGHNCKKRNNDPTGHAEIVAIR 65

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              + L    L +  LYVTLEPC MC  AI  +RI  L YG  +PK G I          
Sbjct: 66  QASQKLQSCYLEKCVLYVTLEPCIMCTGAIIHSRIGLLVYGIDDPKTGAIRTVLNLPDSN 125

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H   +  GI +Q  +Q +Q++FK+ R
Sbjct: 126 ASNHRLPVISGILKQDCQQHLQEWFKKIR 154


>gi|312131614|ref|YP_003998954.1| cmp/dcmp deaminase zinc-binding protein [Leadbetterella byssophila
           DSM 17132]
 gi|311908160|gb|ADQ18601.1| CMP/dCMP deaminase zinc-binding protein [Leadbetterella byssophila
           DSM 17132]
          Length = 153

 Score =  198 bits (506), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 53/148 (35%), Positives = 81/148 (54%), Gaps = 6/148 (4%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNK-IISRAGNRNRELKDVTAHAEILAIRM 61
               FM  AL  A+ A  + EIPVGA+ V + K II +  N+  +L DVTAHAEILA+  
Sbjct: 10  SHEYFMQKALTLAEEAFDQGEIPVGALVVADGKTIIGKGYNQTEKLTDVTAHAEILALSA 69

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
             + L  + L +  LYVTLEPC MCA A++ +++ R+ + AS+ K G        +  + 
Sbjct: 70  ASQYLGAKYLKDCTLYVTLEPCMMCAGALAWSQVSRIVFAASDEKRG-----FSLWEPSV 124

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            H   E+  G+    +  +++ FF+  R
Sbjct: 125 LHPKTEVIKGVLANEAGALLKAFFRRLR 152


>gi|254521455|ref|ZP_05133510.1| tRNA-specific adenosine deaminase [Stenotrophomonas sp. SKA14]
 gi|219719046|gb|EED37571.1| tRNA-specific adenosine deaminase [Stenotrophomonas sp. SKA14]
          Length = 174

 Score =  198 bits (506), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 58/148 (39%), Positives = 84/148 (56%), Gaps = 2/148 (1%)

Query: 4   GNVFMSCALEEAQNAALR-NEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRM 61
              +M  AL  A+ A    +EIPVGAV V  + +++    N N    D +AHAEI+A+R+
Sbjct: 13  DEHWMRHALALAERAQREFDEIPVGAVLVGADGQLLGEGWNLNIASHDPSAHAEIVAMRV 72

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
           G ++LS   L    LYVTLEPC MCA AI  AR+ RL YGAS+PK G   +       A 
Sbjct: 73  GGKVLSNHRLLGSTLYVTLEPCAMCAMAIVHARVSRLVYGASDPKTGACGSVFDLLGDAR 132

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H  EI+ G+  + +   + ++F+ +R
Sbjct: 133 HNHRVEIHGGVLAKEASTRLTNYFRAKR 160


>gi|157804219|ref|YP_001492768.1| cytosine deaminase [Rickettsia canadensis str. McKiel]
 gi|157785482|gb|ABV73983.1| cytosine deaminase [Rickettsia canadensis str. McKiel]
          Length = 200

 Score =  198 bits (506), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 68/148 (45%), Positives = 98/148 (66%), Gaps = 2/148 (1%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVL--NNKIISRAGNRNRELKDVTAHAEILAIRM 61
            N FM  AL++A+ A  +NE+PVGAV V   N KII+ + N   E  +   HAEI+ I  
Sbjct: 12  NNFFMQQALKQARIAFDKNEVPVGAVIVDRLNQKIIASSYNNTEEKNNALYHAEIITINE 71

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
            C I+S + L + D+YVTLEPC MCAAAIS +R++RL+YG S+PK G +E+  +++  + 
Sbjct: 72  ACNIISCKNLNDYDIYVTLEPCAMCAAAISHSRLKRLFYGVSDPKHGAVESNLRYFNSSA 131

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
           C H PEIY GI  + S  ++++FFK+ R
Sbjct: 132 CFHRPEIYSGILAEDSGLLMKEFFKKIR 159


>gi|290969052|ref|ZP_06560587.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Megasphaera genomosp. type_1 str. 28L]
 gi|290781008|gb|EFD93601.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Megasphaera genomosp. type_1 str. 28L]
          Length = 157

 Score =  198 bits (506), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 56/139 (40%), Positives = 70/139 (50%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M    ++M  AL EA+ A    EIP+GAV V  N II+RA N    L   TAHAE+LAI 
Sbjct: 1   MTLDELYMGKALAEAETAFAVEEIPIGAVIVHENTIIARAYNLRETLPCATAHAELLAIE 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
             CR L++  L    LYVT EPC MCA AI  +R+ RL YG  +PK G +          
Sbjct: 61  KACRHLNRWRLSGCTLYVTTEPCPMCAGAIVNSRLDRLVYGCPDPKAGAVHTLFHLTDHP 120

Query: 121 TCHHSPEIYPGISEQRSRQ 139
             +H   +  GI       
Sbjct: 121 RLNHRVAVTAGIRADECAD 139


>gi|163782336|ref|ZP_02177334.1| hypothetical protein HG1285_06100 [Hydrogenivirga sp. 128-5-R1-1]
 gi|159882369|gb|EDP75875.1| hypothetical protein HG1285_06100 [Hydrogenivirga sp. 128-5-R1-1]
          Length = 147

 Score =  198 bits (506), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 57/146 (39%), Positives = 85/146 (58%), Gaps = 3/146 (2%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
            VF+  AL+EA+ A    E+PVG V V    +++RA NR  ELKD +AHAE+LA+R   +
Sbjct: 3   EVFLKEALKEAERAYALGEVPVGCVVVKGGNVLARAHNRTEELKDASAHAELLALREAAK 62

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
           +L    L   +LYVTLEPC MCA A+ L R+ R+ +G  + K GG+ +          +H
Sbjct: 63  VLGDWRLEGCELYVTLEPCVMCAYALILFRVDRVVFGTPDRKHGGVMSLYSLLDDERFNH 122

Query: 125 SP-EIYPGISEQRSRQIIQDFFKERR 149
               +Y     +   +++++FFKERR
Sbjct: 123 RVKWVYEPC--EECGRLLREFFKERR 146


>gi|119356459|ref|YP_911103.1| tRNA-adenosine deaminase [Chlorobium phaeobacteroides DSM 266]
 gi|119353808|gb|ABL64679.1| tRNA-adenosine deaminase [Chlorobium phaeobacteroides DSM 266]
          Length = 153

 Score =  198 bits (506), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 56/145 (38%), Positives = 84/145 (57%), Gaps = 1/145 (0%)

Query: 6   VFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
            +M+ A +EA  A  + E+PVGAV    N  I+ +  N+  EL D TAHAE++A+     
Sbjct: 5   HYMAIAFKEALKAVEKKEVPVGAVVFDSNGNIVGKGYNQVEELSDATAHAEMIALTSAMA 64

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
            L+ + L +  + VT+EPC MCA A+  A+I RL +GA +PK G              +H
Sbjct: 65  TLNTKYLDDCTIAVTMEPCPMCAGALVNAKIGRLIFGAYDPKMGAAGTVLNITGCRELNH 124

Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149
           +PE++ GI EQ+   ++QDFF+E R
Sbjct: 125 NPEVFGGIMEQQCSGLLQDFFRELR 149


>gi|163786614|ref|ZP_02181062.1| putative cytosine/adenosine deaminase [Flavobacteriales bacterium
           ALC-1]
 gi|159878474|gb|EDP72530.1| putative cytosine/adenosine deaminase [Flavobacteriales bacterium
           ALC-1]
          Length = 149

 Score =  198 bits (506), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 57/147 (38%), Positives = 85/147 (57%), Gaps = 6/147 (4%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
               FM  AL+EA+ A  + EIPVGA+ V+ ++II+R  N    L DVTAHAE+ AI   
Sbjct: 6   DDTYFMRKALQEAEVAFEKGEIPVGAIIVVKDRIIARTHNLTELLNDVTAHAEMQAITSA 65

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
              L  + L +  LYVTLEPC MCA A+  ++I ++ YGAS+ + G    GT+       
Sbjct: 66  ANFLGGKYLIDCTLYVTLEPCQMCAGALYWSQISKIVYGASDEQRGFETMGTKL------ 119

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           H   ++  GI  + + ++++ FF E+R
Sbjct: 120 HPKTKVVSGILAEEASELMKRFFIEKR 146


>gi|301058427|ref|ZP_07199448.1| cytidine and deoxycytidylate deaminase zinc-binding region [delta
           proteobacterium NaphS2]
 gi|300447483|gb|EFK11227.1| cytidine and deoxycytidylate deaminase zinc-binding region [delta
           proteobacterium NaphS2]
          Length = 159

 Score =  198 bits (505), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 56/143 (39%), Positives = 76/143 (53%), Gaps = 1/143 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M+ AL EA+ A  + E+PVGAV       I+SRA N+   L D TAHAEILAIR  C I 
Sbjct: 2   MAQALLEAKKAYSKGEVPVGAVLADAQGYILSRAHNQPISLCDPTAHAEILAIRKACSIC 61

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L    L  T+EPC MC  A   +R+  + +GA + KGG   +          +H  
Sbjct: 62  GNYRLTRCLLVATIEPCIMCMGAAIHSRVSTVIFGAHDVKGGAAGSLYDLSRDYRLNHRM 121

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           EI  G+ E   R++++ FF+ RR
Sbjct: 122 EIVSGVREDECRELMRAFFRARR 144


>gi|84515288|ref|ZP_01002650.1| hypothetical protein SKA53_01481 [Loktanella vestfoldensis SKA53]
 gi|84510571|gb|EAQ07026.1| hypothetical protein SKA53_01481 [Loktanella vestfoldensis SKA53]
          Length = 148

 Score =  198 bits (505), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 81/142 (57%), Positives = 99/142 (69%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  AL EA+ AA R E+PVGAV   +  II++AGNR REL D TAHAE+LAIR  C  L 
Sbjct: 7   MDIALTEARAAAARGEVPVGAVITQDGAIIAQAGNRTRELNDPTAHAEMLAIRAACAALG 66

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
           QE L   DLYVTLEPC MCAAAIS ARI RLYY A++PK GG+  G + +T   CHH P+
Sbjct: 67  QERLTGCDLYVTLEPCPMCAAAISNARIARLYYAAADPKSGGVAQGPRIFTHPQCHHRPD 126

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
           +Y GIS   + Q+++DFF  +R
Sbjct: 127 VYDGISATAAEQLLRDFFAAKR 148


>gi|167765018|ref|ZP_02437139.1| hypothetical protein BACSTE_03412 [Bacteroides stercoris ATCC
           43183]
 gi|167697687|gb|EDS14266.1| hypothetical protein BACSTE_03412 [Bacteroides stercoris ATCC
           43183]
          Length = 144

 Score =  198 bits (505), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 60/147 (40%), Positives = 79/147 (53%), Gaps = 5/147 (3%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
               +M  AL EAQ A  R E+PVGAV V  ++II+RA N    L DVTAHAE+ AI   
Sbjct: 2   TDTDYMKQALLEAQKAGERGEVPVGAVVVCKDRIIARAHNLTETLTDVTAHAEMQAITAA 61

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
              L  + L E  LYVT+EPC MCA AI+ A++ RL +GA + K G      Q Y     
Sbjct: 62  AATLGGKYLNECTLYVTVEPCVMCAGAIAWAQMGRLVFGAEDEKRG-----YQRYAPKAL 116

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           H    +  G+       +++DFF  +R
Sbjct: 117 HPKTAVVKGVLADECAALMKDFFAAKR 143


>gi|291459912|ref|ZP_06599302.1| cytidine/deoxycytidylate deaminase family protein [Oribacterium sp.
           oral taxon 078 str. F0262]
 gi|291417253|gb|EFE90972.1| cytidine/deoxycytidylate deaminase family protein [Oribacterium sp.
           oral taxon 078 str. F0262]
          Length = 179

 Score =  198 bits (505), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 54/164 (32%), Positives = 75/164 (45%), Gaps = 19/164 (11%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNN-------------------KIISRAGNRNR 45
              M  A+ EA+ A    ++P+G + V +                    +II R  NR  
Sbjct: 9   EELMRLAIREAKKAERNGDVPIGCLIVYDGRLPGSRADQRAEEQSIRPGEIIGRGYNRRN 68

Query: 46  ELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNP 105
             K    HAEI AI   CR L    L +  + VTLEPC MCA AI  ARI RL +GA NP
Sbjct: 69  RDKSALKHAEISAISKACRRLGDWRLEDCTMIVTLEPCPMCAGAILQARIPRLLFGAENP 128

Query: 106 KGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
           K G   +      L+  +H  E+ P +  +  ++++ DFF   R
Sbjct: 129 KAGFCGSVLDILQLSALNHRVELLPPVLREDCKRLMTDFFGRLR 172


>gi|282883358|ref|ZP_06291951.1| tRNA-specific adenosine deaminase [Peptoniphilus lacrimalis 315-B]
 gi|281296769|gb|EFA89272.1| tRNA-specific adenosine deaminase [Peptoniphilus lacrimalis 315-B]
          Length = 157

 Score =  198 bits (505), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 53/144 (36%), Positives = 81/144 (56%)

Query: 6   VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
            FM  ALE A+ +    ++PVG V V + KII +  N+  + K+   HAEI AI   C+ 
Sbjct: 10  YFMKKALELAKISYENFDVPVGCVIVKDKKIIGKGYNQKEKNKNPLCHAEINAINSACKN 69

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           L+   L + D+YVTLEPC MC  AI  ARI+ LY+GA N + G + +  +       +H 
Sbjct: 70  LNSYHLEDCDMYVTLEPCLMCVGAIINARIKNLYFGAYNYRFGAVLSHVELLKDGGFNHK 129

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
            +   GI ++ S +++  FF++ R
Sbjct: 130 TKYQGGILKEESARLLNSFFEKLR 153


>gi|167748009|ref|ZP_02420136.1| hypothetical protein ANACAC_02746 [Anaerostipes caccae DSM 14662]
 gi|167652586|gb|EDR96715.1| hypothetical protein ANACAC_02746 [Anaerostipes caccae DSM 14662]
          Length = 152

 Score =  198 bits (505), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 56/149 (37%), Positives = 82/149 (55%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M +   FM  A+++A+ AA   ++P+G V VL+ KII+RA N+  + K   AHAE+LAI 
Sbjct: 1   MNENEKFMKEAIKQAKKAAAIGDVPIGCVIVLDGKIIARAYNQRNKRKTTLAHAELLAIE 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              +      L E  +Y+TLEPC MCA AI  ARI ++  GA NPK G   +        
Sbjct: 61  KASKKTGDWRLEECTMYITLEPCQMCAGAIVQARIPKVVIGAMNPKAGCAGSILNILQRE 120

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  EI  G+  +    ++ DFF++ R
Sbjct: 121 EFNHQAEIESGVLREECSHMMSDFFRQLR 149


>gi|11068000|gb|AAG28837.1| cytosine deaminase [Bifidobacterium longum]
          Length = 143

 Score =  198 bits (505), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 55/143 (38%), Positives = 74/143 (51%), Gaps = 1/143 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M CALE A  AA   ++PVGAV +    +I+ R  N      D  AHAEI+A+R   + L
Sbjct: 1   MRCALELAGQAAAAGDVPVGAVVLDAAGQIVGRGYNTREADGDPLAHAEIIAMRQAAQAL 60

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  L VTLEPC MCA A     I  + +GA +PK G   +           HSP
Sbjct: 61  GAWNLADCTLAVTLEPCPMCAGACIQTHIGTIAFGAWDPKLGACGSIWDIPRDPHIGHSP 120

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E++ G+ E   + I+ DFF +RR
Sbjct: 121 EVHGGVLEGECQSILTDFFAQRR 143


>gi|296113086|ref|YP_003627024.1| tRNA-specific adenosine deaminase [Moraxella catarrhalis RH4]
 gi|295920780|gb|ADG61131.1| tRNA-specific adenosine deaminase [Moraxella catarrhalis RH4]
          Length = 159

 Score =  198 bits (505), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 58/148 (39%), Positives = 81/148 (54%), Gaps = 1/148 (0%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
           +    M+ ALE A+  A   EIPVGAV V   +I+    N     +D TAHAEI+A+R  
Sbjct: 2   RDVEMMNRALEIAKQGAKFGEIPVGAVVVYEGRILGEGYNCPITTQDPTAHAEIVAVRRA 61

Query: 63  CRILSQEILP-EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
           C  L+   LP    LYVTLEPCTMC  A+  ARI R+ +GA  PK G + +  +      
Sbjct: 62  CETLNNYRLPKGCILYVTLEPCTMCFGALIHARISRVVFGAFEPKAGVVVSQLKLPEQVF 121

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H   +Y G+   +S  ++  FF++RR
Sbjct: 122 YNHHLSVYGGLLADKSSALLSGFFRQRR 149


>gi|313200758|ref|YP_004039416.1| cmp/dcmp deaminase zinc-binding protein [Methylovorus sp. MP688]
 gi|312440074|gb|ADQ84180.1| CMP/dCMP deaminase zinc-binding protein [Methylovorus sp. MP688]
          Length = 175

 Score =  198 bits (505), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 61/146 (41%), Positives = 75/146 (51%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
              FM  AL+ AQ AA   E+PVGA+ VL+  II R  N      D TAHAEI A+R   
Sbjct: 16  DQAFMQQALQLAQAAADAGEVPVGALVVLDGAIIGRGMNAPIGRHDPTAHAEIQAMREAA 75

Query: 64  RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123
             +    L    LYVTLEPC MC+ AI  ARI RL YGA +PK G   +          +
Sbjct: 76  SAIGNYRLVGCTLYVTLEPCAMCSGAIQHARIARLVYGARDPKTGSCGSVIDLMAEPRLN 135

Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149
           H  E+  GI  + S  ++  FF  RR
Sbjct: 136 HHTEVAGGILAEESGSMLSRFFSARR 161


>gi|213962212|ref|ZP_03390476.1| cytidine/deoxycytidylate deaminase family protein [Capnocytophaga
           sputigena Capno]
 gi|213955218|gb|EEB66536.1| cytidine/deoxycytidylate deaminase family protein [Capnocytophaga
           sputigena Capno]
          Length = 144

 Score =  198 bits (504), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 59/149 (39%), Positives = 85/149 (57%), Gaps = 6/149 (4%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M     FM  ALEEAQ A   +EIPVGA+  ++N+II++A N    LKDVTAHAE+ AI 
Sbjct: 1   MNTDEYFMQKALEEAQIAFEEDEIPVGAIITIDNRIIAKAHNLTERLKDVTAHAEMQAIT 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
           M    L  + L +  +Y+TLEPC MCA A+  +++ RL Y A +P  G    G       
Sbjct: 61  MAAHYLGGKYLTDCTMYITLEPCAMCAGALYWSQLSRLVYAADDPHRGFKAMG------G 114

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             H   E+  GI  + +  +++ FF+++R
Sbjct: 115 KLHPKTEVVMGILSEEATTLLKQFFQQKR 143


>gi|255534103|ref|YP_003094475.1| zinc-binding CMP/dCMP deaminase [Pedobacter heparinus DSM 2366]
 gi|255347087|gb|ACU06413.1| CMP/dCMP deaminase zinc-binding [Pedobacter heparinus DSM 2366]
          Length = 157

 Score =  198 bits (504), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 55/147 (37%), Positives = 74/147 (50%), Gaps = 5/147 (3%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
           +   FM  AL+EAQ A    EIP+GA+ V   KI+ R  N   +L DVTAHAE+ A    
Sbjct: 15  EDEHFMRLALQEAQKAYDLKEIPIGAIVVCKGKIVGRGHNLTEQLNDVTAHAEMQAFTAA 74

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
            + L  + L +  LYVT+EPC MCA A    +I +L YGA  PK G      Q       
Sbjct: 75  SQTLGGKYLKDCTLYVTIEPCVMCAGASYWTQIGKLVYGAPEPKRGFTTKSNQL-----L 129

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           H    +  G+  Q    ++  FF ++R
Sbjct: 130 HPKTVLKSGVLAQECGALMTKFFADKR 156


>gi|291455623|ref|ZP_06595013.1| cytidine and deoxycytidylate deaminase family protein
           [Bifidobacterium breve DSM 20213]
 gi|291382551|gb|EFE90069.1| cytidine and deoxycytidylate deaminase family protein
           [Bifidobacterium breve DSM 20213]
          Length = 152

 Score =  198 bits (504), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 54/150 (36%), Positives = 75/150 (50%), Gaps = 2/150 (1%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAI 59
           M    + M  ALE A+ AA   ++PVGAV V  + +II R  N      D  AHAEI+A+
Sbjct: 4   MGYDEM-MHGALELAKRAAAAGDVPVGAVVVDADGQIIGRGYNTREADGDPLAHAEIIAM 62

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
           R   R L    L +  L VTLEPC MCA A     I  + +GA + K G   +       
Sbjct: 63  REAARALGSWNLSDCTLAVTLEPCPMCAGACVQTHIGTIVFGAWDSKLGACGSIWDIPRD 122

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
               H+PE++ G++E   + ++  FF  RR
Sbjct: 123 PHIGHAPEVHGGVAEADCQTLLSTFFAHRR 152


>gi|317473697|ref|ZP_07932984.1| cytidine and deoxycytidylate deaminase zinc-binding protein
           [Anaerostipes sp. 3_2_56FAA]
 gi|316898818|gb|EFV20845.1| cytidine and deoxycytidylate deaminase zinc-binding protein
           [Anaerostipes sp. 3_2_56FAA]
          Length = 152

 Score =  198 bits (504), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 57/149 (38%), Positives = 82/149 (55%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M +   FM  A+++A+ AA   ++P+G V VL+ KII+RA N+  + K   AHAE+LAI 
Sbjct: 1   MNENEKFMKEAIKQAKKAAAIGDVPIGCVIVLDGKIIARAYNQRNKRKTTLAHAELLAIE 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              +      L E  +Y+TLEPC MCA AI  ARI ++  GA NPK G   +        
Sbjct: 61  KASKKTGDWRLEECTMYITLEPCQMCAGAIVQARIPKVVIGAMNPKAGCAGSILNILQRE 120

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  EI  G+  +    ++ DFF+E R
Sbjct: 121 EFNHQAEIESGVLREECSHMMSDFFRELR 149


>gi|121602446|ref|YP_989463.1| cytidine and deoxycytidylate deaminase zinc-binding protein
           [Bartonella bacilliformis KC583]
 gi|120614623|gb|ABM45224.1| cytidine and deoxycytidylate deaminase zinc-binding protein
           [Bartonella bacilliformis KC583]
          Length = 148

 Score =  198 bits (504), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 77/142 (54%), Positives = 96/142 (67%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  AL EAQ AA + E+PVGAV      IISRAGN  ++  D T HAEI  IRM C  L 
Sbjct: 6   MEIALLEAQLAAEKGEVPVGAVITRGKTIISRAGNSIKKPYDPTGHAEIRVIRMACETLK 65

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
            E LP+ +LYVTLEPC MCAAAIS  RI+ LYY AS+ KGG IE+G + Y   TCHH P+
Sbjct: 66  SERLPDCNLYVTLEPCAMCAAAISFTRIQHLYYAASDSKGGAIEHGPRLYQQPTCHHRPD 125

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
           +Y G  E+ + Q+++DFF ++R
Sbjct: 126 VYSGFKEREAIQLLKDFFAQKR 147


>gi|319787039|ref|YP_004146514.1| CMP/dCMP deaminase zinc-binding protein [Pseudoxanthomonas
           suwonensis 11-1]
 gi|317465551|gb|ADV27283.1| CMP/dCMP deaminase zinc-binding protein [Pseudoxanthomonas
           suwonensis 11-1]
          Length = 366

 Score =  198 bits (504), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 54/148 (36%), Positives = 80/148 (54%), Gaps = 2/148 (1%)

Query: 4   GNVFMSCALEEAQNAALR-NEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRM 61
               M  AL+ A+ A    +EIPVGAV V    ++I    NRN    D +AHAEI+A+R 
Sbjct: 214 DERHMCHALDLAERAEKEFDEIPVGAVVVSAAGEVIGEGWNRNILDHDPSAHAEIMAMRQ 273

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
             + LS   L    LYVTLEPC MCA A+  ARI R+ YGA++PK G   +         
Sbjct: 274 AGQALSNHRLVGATLYVTLEPCAMCAMALVHARIARVVYGAADPKTGACGSVFDVIGDPR 333

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H  ++  G+  + + + + ++F+ +R
Sbjct: 334 HNHRVQVQGGVLGEEAGRRLTNYFRAKR 361


>gi|291452772|ref|ZP_06592162.1| deaminase [Streptomyces albus J1074]
 gi|291355721|gb|EFE82623.1| deaminase [Streptomyces albus J1074]
          Length = 142

 Score =  198 bits (504), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 52/142 (36%), Positives = 74/142 (52%), Gaps = 1/142 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  AL EAQ A    ++PVGAV +  + +++S A N      D TAHAEILA+R      
Sbjct: 1   MRQALAEAQRAGRGGDVPVGAVVLDPDGRLLSAAHNEREADGDPTAHAEILALRRAAARS 60

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
            +  L +  L VTLEPCTMCA A   +R+ R+ YGA + K G   +          +H P
Sbjct: 61  GRWRLTDCTLVVTLEPCTMCAGAAVQSRVDRVVYGARDEKAGAAGSLWDVVRDRRLNHRP 120

Query: 127 EIYPGISEQRSRQIIQDFFKER 148
           E+  G+       ++ +FF+ R
Sbjct: 121 EVIEGVLAADCAALLTEFFRAR 142


>gi|282863444|ref|ZP_06272503.1| CMP/dCMP deaminase zinc-binding [Streptomyces sp. ACTE]
 gi|282561779|gb|EFB67322.1| CMP/dCMP deaminase zinc-binding [Streptomyces sp. ACTE]
          Length = 142

 Score =  198 bits (504), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 52/142 (36%), Positives = 73/142 (51%), Gaps = 1/142 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  AL EA  AA   ++PVGAV +  +   ++   N      D TAHAE+LA+R    +L
Sbjct: 1   MRQALHEAAQAASAGDVPVGAVVLGPDGAPLATGHNEREATGDPTAHAEVLALRRAASVL 60

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L    L VTLEPCTMCA A+  +R+ R+ YGA + K G   +          +H P
Sbjct: 61  GGWRLTGCTLVVTLEPCTMCAGALVQSRVARVVYGARDEKAGAAGSLWDVLRDRRLNHRP 120

Query: 127 EIYPGISEQRSRQIIQDFFKER 148
           E+  G+ E+     +  FF+ER
Sbjct: 121 EVVYGVLEETCAAQLTAFFRER 142


>gi|317475163|ref|ZP_07934430.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Bacteroides eggerthii 1_2_48FAA]
 gi|316908616|gb|EFV30303.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Bacteroides eggerthii 1_2_48FAA]
          Length = 144

 Score =  198 bits (504), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 59/147 (40%), Positives = 79/147 (53%), Gaps = 5/147 (3%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
             N +M  AL EAQ A  R E+PVGAV V  +++I+RA N    L DVTAHAE+ AI   
Sbjct: 2   DDNYYMKQALLEAQKAGDRGEVPVGAVVVCKDRVIARAHNLTETLTDVTAHAEMQAITAA 61

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
              L  + L E  LYVT+EPC MCA AI+ A+  RL +GA + K G      Q Y     
Sbjct: 62  ASTLGGKYLNECTLYVTVEPCVMCAGAIAWAQTGRLVFGAEDEKRG-----YQRYAPHAL 116

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           H    +  G+       ++++FF  +R
Sbjct: 117 HPKTVVVKGVLGDECAALMKNFFAGKR 143


>gi|325207969|gb|ADZ03421.1| putative tRNA-specific adenosine deaminase [Neisseria meningitidis
           NZ-05/33]
          Length = 148

 Score =  198 bits (504), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 57/144 (39%), Positives = 81/144 (56%)

Query: 6   VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
            FM  ALE+A+ +AL  EIPVGAV V + KII+ A N      +V+ HAEI A+      
Sbjct: 3   HFMGLALEQAKLSALMGEIPVGAVIVSDGKIIASAHNTCIADCNVSRHAEINALAQAGSE 62

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           +    L   D+Y+TLEPC MCA+A+  ARIRR+ YGA+ PK G   +    +     +  
Sbjct: 63  MQNYRLDGCDIYITLEPCAMCASALIQARIRRVIYGAAEPKTGAAGSIVNLFADKRLNTH 122

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
             I  GI ++  R ++  FF+ +R
Sbjct: 123 TAIRGGILQEECRAVLSRFFQNKR 146


>gi|326571142|gb|EGE21166.1| tRNA-specific adenosine deaminase [Moraxella catarrhalis BC7]
          Length = 159

 Score =  198 bits (504), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 58/143 (40%), Positives = 80/143 (55%), Gaps = 1/143 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M+ ALE A+  A   EIPVGAV V   +I+    N     +D TAHAEI+A+R  C  L+
Sbjct: 7   MNRALEIAKQGAKFGEIPVGAVVVYEGRILGEGYNCPITTQDPTAHAEIVAVRRACETLN 66

Query: 68  QEILP-EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
              LP    LYVTLEPCTMC  A+  ARI R+ +GA  PK G + +  +       +H  
Sbjct: 67  NYRLPKGCILYVTLEPCTMCFGALIHARISRVVFGAFEPKAGVVVSQLKLPEQVFYNHHL 126

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
            +Y G+   +S  ++  FF++RR
Sbjct: 127 SVYGGLLADKSSALLSGFFRQRR 149


>gi|328545044|ref|YP_004305153.1| Cytidine and deoxycytidylate deaminase zinc-binding region domain
           protein [polymorphum gilvum SL003B-26A1]
 gi|326414788|gb|ADZ71851.1| Cytidine and deoxycytidylate deaminase zinc-binding region domain
           protein [Polymorphum gilvum SL003B-26A1]
          Length = 176

 Score =  198 bits (504), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 69/128 (53%), Positives = 93/128 (72%)

Query: 22  NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81
            E+PVGAV V + ++++  GNR  EL D TAHAE+L IR  C  L  + L   DLYVTLE
Sbjct: 49  GEVPVGAVLVCDGRVVAADGNRTLELNDPTAHAEMLVIRAACAALGSQRLSGCDLYVTLE 108

Query: 82  PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141
           PC MCA AIS ARIRRLYYGA + KGG +++G +F+   TCHH+PE+Y GI E+ + +++
Sbjct: 109 PCPMCAGAISFARIRRLYYGAGDEKGGAVDHGVRFFASPTCHHAPEVYAGIGERPAGELL 168

Query: 142 QDFFKERR 149
           +DFF++RR
Sbjct: 169 KDFFRDRR 176


>gi|332666401|ref|YP_004449189.1| CMP/dCMP deaminase zinc-binding protein [Haliscomenobacter
           hydrossis DSM 1100]
 gi|332335215|gb|AEE52316.1| CMP/dCMP deaminase zinc-binding protein [Haliscomenobacter
           hydrossis DSM 1100]
          Length = 148

 Score =  198 bits (504), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 62/146 (42%), Positives = 84/146 (57%), Gaps = 5/146 (3%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
              FM  AL+EAQ A    EIPVGAV    N+II+R  N   +L DVTAHAEIL+I    
Sbjct: 7   DEYFMQEALKEAQLAFEEGEIPVGAVIACENRIIARGHNTTEKLLDVTAHAEILSITAAS 66

Query: 64  RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123
             L+ + LP+  LYVTLEPC MCA AI  A++ RL YGA + K G +  G +       H
Sbjct: 67  NYLNSKYLPDCTLYVTLEPCNMCAGAIFWAQMGRLVYGAGDEKRGFMRIGKEL-----LH 121

Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149
               +  G+  +   Q++++FF++ R
Sbjct: 122 PKTTLEYGVLHEECSQLLKEFFQKIR 147


>gi|319406589|emb|CBI80231.1| Cytosine/adenosine deaminase [Bartonella sp. 1-1C]
          Length = 150

 Score =  198 bits (504), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 77/142 (54%), Positives = 96/142 (67%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  AL EAQ A  ++EIPVGAV      II+RAGN  +   D T HAE+  IR+ C+I  
Sbjct: 6   MEIALLEAQLAKKQDEIPVGAVITHGQTIIARAGNYIKTPHDPTGHAEMRVIRIACQIFK 65

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
            E +PE DLYVTLEPC MCAA IS ARIR LYY  S+PKGG IE+G +FY   TCHH P 
Sbjct: 66  SERIPECDLYVTLEPCAMCAATISFARIRNLYYATSDPKGGAIEHGPRFYQQQTCHHRPN 125

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
           +Y G  E+ + Q+++DFF ++R
Sbjct: 126 VYSGFKEKEASQLLKDFFIQKR 147


>gi|225847988|ref|YP_002728151.1| tRNA-specific adenosine deaminase [Sulfurihydrogenibium azorense
           Az-Fu1]
 gi|225643800|gb|ACN98850.1| tRNA-specific adenosine deaminase [Sulfurihydrogenibium azorense
           Az-Fu1]
          Length = 157

 Score =  197 bits (503), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 55/150 (36%), Positives = 86/150 (57%), Gaps = 2/150 (1%)

Query: 1   MKK-GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
           MK+    F+  A++EA+ A  + E+PVGAV V ++K++S+  N     K+   HAEI+AI
Sbjct: 1   MKEINTKFIELAIKEAEKALKKGEVPVGAVLVKDDKVVSKGYNLRISKKNALYHAEIVAI 60

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
              C+ L    L +  LY TLEPC MCA AI  ARI+++ + A + KGG + +    +  
Sbjct: 61  ERACKKLKSWRLDDTVLYTTLEPCLMCAGAIMQARIKKVVFLAKDEKGGAVLSNYTVFDD 120

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
                  E Y  I ++R+ ++++DFFK  R
Sbjct: 121 KKLPFKVE-YSYIPDERAEKLLKDFFKILR 149


>gi|300813981|ref|ZP_07094274.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Peptoniphilus sp. oral taxon 836 str. F0141]
 gi|300511875|gb|EFK39082.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Peptoniphilus sp. oral taxon 836 str. F0141]
          Length = 157

 Score =  197 bits (503), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 53/144 (36%), Positives = 80/144 (55%)

Query: 6   VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
            FM  ALE A+ +    ++PVG V V + KII +  N+  + K+   HAEI AI   C+ 
Sbjct: 10  YFMKKALELAKISYKNFDVPVGCVIVKDKKIIGQGYNQKEKKKNPLCHAEINAINSACKN 69

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           L+   L + D+YVTLEPC MC  AI  ARI+ LY+GA N + G + +  +       +H 
Sbjct: 70  LNSYHLEDCDMYVTLEPCLMCVGAIINARIKNLYFGAYNYRFGAVLSHVELLKDGGFNHK 129

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
                GI ++ S +++  FF++ R
Sbjct: 130 TNYQGGILKEESARLLNSFFEKLR 153


>gi|325134098|gb|EGC56751.1| tRNA-specific adenosine deaminase [Neisseria meningitidis M13399]
 gi|325206234|gb|ADZ01687.1| tRNA-specific adenosine deaminase [Neisseria meningitidis
           M04-240196]
          Length = 163

 Score =  197 bits (503), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 55/148 (37%), Positives = 81/148 (54%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           ++   FM  AL +A+ +A   EIPVGAV V + KII+ A N      +V+ HAEI A+  
Sbjct: 14  EEMEHFMREALRQAEQSAADGEIPVGAVIVSDGKIIASAHNTCIADCNVSCHAEINALAQ 73

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
               +    L   D+Y+TLEPC MCA+A+  ARIRR+ YGA+ PK G   +    +    
Sbjct: 74  AGSEMQNYRLDGCDIYITLEPCAMCASALIQARIRRVIYGAAEPKTGAAGSIVNLFADKR 133

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +    I  GI ++  R ++  FF+ +R
Sbjct: 134 LNTHTAIRGGILQEECRAVLNRFFQNKR 161


>gi|293608246|ref|ZP_06690549.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|292828819|gb|EFF87181.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|325122022|gb|ADY81545.1| tRNA-specific adenosine deaminase [Acinetobacter calcoaceticus
           PHEA-2]
          Length = 167

 Score =  197 bits (503), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 57/144 (39%), Positives = 75/144 (52%), Gaps = 1/144 (0%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
               +M  A E+A+ AA + EIPVGAV V  N++I    N    L D TAHAEI AIR  
Sbjct: 5   SDEYWMQLAYEQAELAAQQGEIPVGAVLVSQNRVIGSGYNAPITLLDPTAHAEIQAIRAA 64

Query: 63  CRILSQEILP-EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
           C  L    LP +  LYVTLEPCTMC  A+  ARI+ + +G   PK G + +  Q      
Sbjct: 65  CSSLENYRLPEDTTLYVTLEPCTMCVGALVHARIKHVVFGTPEPKAGSLVSARQLLQQGY 124

Query: 122 CHHSPEIYPGISEQRSRQIIQDFF 145
            +H      G  +++  Q +  FF
Sbjct: 125 YNHRFTFQNGCLQEKCAQQLSHFF 148


>gi|297200779|ref|ZP_06918176.1| deaminase [Streptomyces sviceus ATCC 29083]
 gi|297147728|gb|EDY56383.2| deaminase [Streptomyces sviceus ATCC 29083]
          Length = 162

 Score =  197 bits (503), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 52/143 (36%), Positives = 75/143 (52%), Gaps = 4/143 (2%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNK--IISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M  AL+EA  A    ++PVGAV +  +   +++   N    + D TAHAE+LAIR     
Sbjct: 22  MRLALDEAGRAGT--DVPVGAVVLSPDGTTVLAAGHNEREAVGDPTAHAEVLAIRRAAAE 79

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           L +  L    L VTLEPCTMCA AI  +R+ R+ YGA + K G   +          +H 
Sbjct: 80  LGEWRLTGCTLVVTLEPCTMCAGAIVQSRVDRVVYGARDEKAGAAGSLWDVVRDRRLNHR 139

Query: 126 PEIYPGISEQRSRQIIQDFFKER 148
           PE+  G+      Q++  FF++R
Sbjct: 140 PEVVEGVLAAECAQLLTAFFRDR 162


>gi|228472860|ref|ZP_04057617.1| cytidine/deoxycytidylate deaminase family protein [Capnocytophaga
           gingivalis ATCC 33624]
 gi|228275442|gb|EEK14219.1| cytidine/deoxycytidylate deaminase family protein [Capnocytophaga
           gingivalis ATCC 33624]
          Length = 145

 Score =  197 bits (503), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 58/147 (39%), Positives = 84/147 (57%), Gaps = 6/147 (4%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
               FM  AL+EAQ A  + E+PVGAV  +  +II++A N   +L DVTAHAE+ AI   
Sbjct: 4   SDTYFMQKALQEAQIAFEQGEVPVGAVITIGERIIAKAHNLTEKLTDVTAHAEMQAITAA 63

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
              L  + L +  LYVTLEPC MCA A+  ++I ++ YGA++ K G        +     
Sbjct: 64  SEYLGGKYLMDCTLYVTLEPCVMCAGALYWSQIGKVVYGATDSKRG-----YHLFGN-LL 117

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           H   ++  G+ E+   QI++DFF +RR
Sbjct: 118 HPKTQVVQGVLEEPCSQIVKDFFLQRR 144


>gi|86140825|ref|ZP_01059384.1| putative cytosine/adenosine deaminase [Leeuwenhoekiella blandensis
           MED217]
 gi|85832767|gb|EAQ51216.1| putative cytosine/adenosine deaminase [Leeuwenhoekiella blandensis
           MED217]
          Length = 151

 Score =  197 bits (503), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 63/147 (42%), Positives = 86/147 (58%), Gaps = 6/147 (4%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
             + FM  AL+EA+ A    EIPVGAV  +NN+II+RA N    L DVTAHAE+ AI   
Sbjct: 8   DDHYFMKKALQEAETAFELGEIPVGAVVTVNNRIIARAHNLTERLHDVTAHAEMQAITAA 67

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
              L  + L +  LYVTLEPC MCA A+  ++I R+ +GA++   G  + GTQ       
Sbjct: 68  ANFLGGKYLTDSTLYVTLEPCQMCAGALYWSQISRIVFGAADTTRGYQKMGTQL------ 121

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           H   ++  GI E  + Q+++ FF ERR
Sbjct: 122 HPKTQVTSGIMETEAAQLLKRFFIERR 148


>gi|327191131|gb|EGE58176.1| CMP/dCMP deaminase zinc-binding protein [Rhizobium etli CNPAF512]
          Length = 145

 Score =  197 bits (503), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 86/142 (60%), Positives = 108/142 (76%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  ALEEA+ A  R E+P+GAV V+++  +SR+GNR RE  DVTAHAEI AIR+ C  L 
Sbjct: 1   MEMALEEARAAGERGEVPIGAVVVIDDIAVSRSGNRTRERNDVTAHAEIAAIRLACEALG 60

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
           QE L   DLYVTLEPCTMCAAAIS ARIRRLYYGA +PKGG ++NG +FY   TCHH+PE
Sbjct: 61  QERLAGADLYVTLEPCTMCAAAISFARIRRLYYGAEDPKGGAVDNGVRFYAQPTCHHAPE 120

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
           +Y G +E +S +I++ FF ++R
Sbjct: 121 VYSGFNEVQSAEILRTFFSQKR 142


>gi|317051389|ref|YP_004112505.1| CMP/dCMP deaminase zinc-binding protein [Desulfurispirillum indicum
           S5]
 gi|316946473|gb|ADU65949.1| CMP/dCMP deaminase zinc-binding protein [Desulfurispirillum indicum
           S5]
          Length = 167

 Score =  197 bits (503), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 71/147 (48%), Positives = 91/147 (61%), Gaps = 1/147 (0%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
               FM+ ALEEA+ AA R E+PVGAV V + +II+RAGNR  E +D TAHAE+LAIR  
Sbjct: 9   DAERFMAVALEEARQAAQRGEVPVGAVIVRHGEIIARAGNRKEEHRDPTAHAEVLAIREA 68

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
               +   L +V+LYVTLEPC MC  AI  ARI R+YY  S+ K GGI +          
Sbjct: 69  AAACANWRLEDVELYVTLEPCVMCCGAIIAARIPRVYYACSDEKYGGI-SLFAMTADQRL 127

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H  +   G+ EQR RQ+++ FF  RR
Sbjct: 128 NHQVDARRGLLEQRCRQLLEAFFSTRR 154


>gi|220910074|ref|YP_002485385.1| CMP/dCMP deaminase [Cyanothece sp. PCC 7425]
 gi|219866685|gb|ACL47024.1| CMP/dCMP deaminase zinc-binding [Cyanothece sp. PCC 7425]
          Length = 174

 Score =  197 bits (503), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 55/149 (36%), Positives = 71/149 (47%), Gaps = 1/149 (0%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIR 60
           ++   +M  A+  A+ A    E+PVGA+ V    +++    NR     D TAHAEILA+R
Sbjct: 8   QQHCEWMEQAIALAEQAGAAGEVPVGAIVVSPQGELLGTGENRRERDGDPTAHAEILALR 67

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              + L    L    LYV LEPC MCA AI  ARI  L YGA + K G I          
Sbjct: 68  AAGQKLQTWYLKNCTLYVNLEPCPMCAGAILQARIGLLVYGADDAKTGAIRTVLNLPDSR 127

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
              H      GI E   RQ +Q +F  +R
Sbjct: 128 CSFHRLTTLGGILETTCRQQLQTWFARKR 156


>gi|167752821|ref|ZP_02424948.1| hypothetical protein ALIPUT_01082 [Alistipes putredinis DSM 17216]
 gi|167659890|gb|EDS04020.1| hypothetical protein ALIPUT_01082 [Alistipes putredinis DSM 17216]
          Length = 148

 Score =  197 bits (503), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 51/152 (33%), Positives = 79/152 (51%), Gaps = 8/152 (5%)

Query: 1   MKK---GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57
           M++      FM  AL EA+ A    E+P+GAV V + +I+ R  N    L D TAHAE+ 
Sbjct: 1   MEQQQPDEKFMRLALNEAEKALEEQEVPIGAVVVADGRIVGRGHNLVETLADATAHAEMQ 60

Query: 58  AIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFY 117
           A+      +  + L E  LYVT+EPC MCA AI+ +++ R+ YGA +PK G      + Y
Sbjct: 61  ALTAAASTVGGKYLSECTLYVTVEPCIMCAGAIAWSQVGRVVYGADDPKRG-----YRRY 115

Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
           +         +  G+  +   ++++ FF   R
Sbjct: 116 SEQVFPPRTTVTRGVLAEECERLVRSFFAALR 147


>gi|28209851|ref|NP_780795.1| cytosine deaminase [Clostridium tetani E88]
 gi|28202286|gb|AAO34732.1| cytosine deaminase [Clostridium tetani E88]
          Length = 146

 Score =  197 bits (503), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 53/145 (36%), Positives = 77/145 (53%), Gaps = 1/145 (0%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
             FM  A+ EA+ A   NE+P+GAV V  NKII R  N   + K+  AHAEI+AIR  C+
Sbjct: 3   EYFMKEAVLEARKALNINEVPIGAVIVKENKIIGRGHNLVEKSKNPLAHAEIIAIREACK 62

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
            ++   L    +YVTLEPC MCA AI  +R+ ++Y G  +P  G              + 
Sbjct: 63  SINNWRLNGCHMYVTLEPCPMCAGAIIRSRMDKVYIGTFDPNSGACGTIINLTQNKYLNT 122

Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149
           +  I   + ++ S  +++ FF  RR
Sbjct: 123 NININW-LYDEESSTLLKKFFYSRR 146


>gi|256820484|ref|YP_003141763.1| CMP/dCMP deaminase zinc-binding [Capnocytophaga ochracea DSM 7271]
 gi|256582067|gb|ACU93202.1| CMP/dCMP deaminase zinc-binding [Capnocytophaga ochracea DSM 7271]
          Length = 144

 Score =  197 bits (503), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 58/149 (38%), Positives = 82/149 (55%), Gaps = 6/149 (4%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M     FM  ALEEAQ A   +EIPVGA+  ++N+II++A N    L DVTAHAE+ AI 
Sbjct: 1   MNTDEYFMQKALEEAQLAFEEDEIPVGAIITIDNRIIAKAHNLTERLNDVTAHAEMQAIT 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
           M    L  + L    +Y+TLEPC MCA A+  +++ RL Y A +   G    G       
Sbjct: 61  MAAHYLGGKYLIGCTMYLTLEPCAMCAGALYWSQLSRLVYAAPDTHRGYSVMG------G 114

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             H   E+  GI  Q +  +++ FF+++R
Sbjct: 115 KLHPKTEVVTGILSQEATTLLKQFFQQKR 143


>gi|326560462|gb|EGE10844.1| tRNA-specific adenosine deaminase [Moraxella catarrhalis 7169]
          Length = 159

 Score =  197 bits (503), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 58/148 (39%), Positives = 81/148 (54%), Gaps = 1/148 (0%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
           +    M+ ALE A+  A   EIPVGAV V   +I+    N     +D TAHAEI+A+R  
Sbjct: 2   RDVEMMNHALEIAKQGAKFGEIPVGAVVVYEGRILGEGYNCPITTQDPTAHAEIVAVRRA 61

Query: 63  CRILSQEILP-EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
           C  L+   LP    LYVTLEPCTMC  A+  ARI R+ +GA  PK G + +  +      
Sbjct: 62  CETLNNYRLPKGCILYVTLEPCTMCFGALIHARISRVVFGAFEPKAGVVVSQLKLPEQVF 121

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H   +Y G+   +S  ++  FF++RR
Sbjct: 122 YNHHLSVYGGLLADKSSALLSGFFRQRR 149


>gi|326790135|ref|YP_004307956.1| CMP/dCMP deaminase zinc-binding protein [Clostridium lentocellum
           DSM 5427]
 gi|326540899|gb|ADZ82758.1| CMP/dCMP deaminase zinc-binding protein [Clostridium lentocellum
           DSM 5427]
          Length = 175

 Score =  197 bits (503), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 55/149 (36%), Positives = 85/149 (57%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M+K   FM  AL EA+ A   +E P+GAV V   ++I R  NR    K+  AHAE++AI 
Sbjct: 1   MEKDIEFMKQALIEAEKAFTLDEAPIGAVIVYKEQVIGRGHNRRNTDKNALAHAEVMAIN 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
             C+ +    L E  +Y+TLEPC MC+ AI  AR+ R+ +GA +PK G   +      + 
Sbjct: 61  EACKHIKDWRLEECTIYITLEPCPMCSGAIVQARLPRVVFGARSPKAGFGGSVLNILQMD 120

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  E+  G+ E+ + Q+++ +FK+ R
Sbjct: 121 ELNHRCEVVEGVCEEEASQLLKSYFKQMR 149


>gi|83309336|ref|YP_419600.1| cytosine/adenosine deaminase [Magnetospirillum magneticum AMB-1]
 gi|82944177|dbj|BAE49041.1| Cytosine/adenosine deaminase [Magnetospirillum magneticum AMB-1]
          Length = 148

 Score =  197 bits (503), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 75/129 (58%), Positives = 96/129 (74%)

Query: 21  RNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80
           R E+PVGAV V + ++I++AGNR  EL D TAHAE+LA+R     L  + L + DLYVTL
Sbjct: 20  RGEVPVGAVIVKDGQVIAQAGNRVEELGDSTAHAEMLALRAATLFLGDKRLEDCDLYVTL 79

Query: 81  EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140
           EPC MCAAAISLARIRRLY+GA +PK GG+E+G + +  ATCHH PE+Y G+ E+RS  +
Sbjct: 80  EPCPMCAAAISLARIRRLYFGAYDPKSGGVEHGAKVFDHATCHHRPEVYGGLEERRSASL 139

Query: 141 IQDFFKERR 149
           +  FF ERR
Sbjct: 140 LSRFFAERR 148


>gi|259502690|ref|ZP_05745592.1| tRNA-specific adenosine deaminase [Lactobacillus antri DSM 16041]
 gi|259169335|gb|EEW53830.1| tRNA-specific adenosine deaminase [Lactobacillus antri DSM 16041]
          Length = 173

 Score =  197 bits (503), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 64/146 (43%), Positives = 88/146 (60%), Gaps = 1/146 (0%)

Query: 1   MKKG-NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
           MK+    FM+ A+ EA+ AAL NE+P+GAV V + +II R  N     +DVT HAE+LAI
Sbjct: 10  MKQEQEQFMAAAVAEARQAALLNEVPIGAVVVKDQQIIGRGHNMREHFQDVTYHAEMLAI 69

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
              C  L    L   DLYVTLEPC MC+ AI  ARI  LYYGA++PK G +E+       
Sbjct: 70  MEACERLHSWRLEGCDLYVTLEPCIMCSGAIINARIANLYYGAADPKAGAVESLYHLMND 129

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFF 145
              +H  ++  G+ ++   Q+++DFF
Sbjct: 130 PRLNHQVQVASGVMQEECSQMLKDFF 155


>gi|49475071|ref|YP_033112.1| nitrogen fixation protein [Bartonella henselae str. Houston-1]
 gi|49237876|emb|CAF27072.1| Nitrogen fixation protein [Bartonella henselae str. Houston-1]
          Length = 148

 Score =  197 bits (503), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 81/142 (57%), Positives = 98/142 (69%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  AL EAQ AA ++E+PVGAV      II RAGN  +   D T HAEI  IRM C    
Sbjct: 6   MEIALLEAQWAAKKDEVPVGAVITRGQSIIVRAGNSIKAAYDPTGHAEIRVIRMACAAFQ 65

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
            E LP+ DLYVTLEPC MCAAAIS ARIRRLYY  S+PKGG IE+G + Y  +TCHHSPE
Sbjct: 66  SERLPDCDLYVTLEPCAMCAAAISFARIRRLYYATSDPKGGAIEHGPRLYKQSTCHHSPE 125

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
           +Y G  E+ + Q+++DFF ++R
Sbjct: 126 VYSGFKEKEAAQLLKDFFAQKR 147


>gi|186684043|ref|YP_001867239.1| CMP/dCMP deaminase, zinc-binding [Nostoc punctiforme PCC 73102]
 gi|186466495|gb|ACC82296.1| CMP/dCMP deaminase, zinc-binding [Nostoc punctiforme PCC 73102]
          Length = 161

 Score =  197 bits (502), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 61/147 (41%), Positives = 81/147 (55%), Gaps = 1/147 (0%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMG 62
              +MSCALE A+ A    E+PVGAV + +  K++++  NR    KD TAHAEILA++  
Sbjct: 11  HQEWMSCALELAKVAGDAGEVPVGAVIIDSTGKLLAQGENRKERDKDPTAHAEILALKTA 70

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
              L    L E  LYVTLEPC MCA AI  AR+ +L YG  + K G I         A  
Sbjct: 71  ATTLQNWHLNECTLYVTLEPCPMCAGAILQARVGQLVYGVDDTKTGAIRTVINIPDSAAS 130

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H  ++  GI E   R+ +Q +F  RR
Sbjct: 131 NHGLQVIGGILESACREQLQAWFATRR 157


>gi|92112967|ref|YP_572895.1| tRNA-adenosine deaminase [Chromohalobacter salexigens DSM 3043]
 gi|91796057|gb|ABE58196.1| tRNA-adenosine deaminase [Chromohalobacter salexigens DSM 3043]
          Length = 151

 Score =  197 bits (502), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 51/150 (34%), Positives = 76/150 (50%), Gaps = 1/150 (0%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAI 59
           M+    +M  AL++A  A    E+PVGAV V  +  I+    N      D +AHAE+ A+
Sbjct: 1   MRSDTFYMHRALDQAHRALEAGEVPVGAVVVARDGDIVGTGFNAPVSSHDPSAHAEVRAL 60

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
           R     L    L    L+VTLEPC MC  AI  AR+ R+ Y A+ P+ G +E+    +  
Sbjct: 61  RDAAERLGNYRLEGCTLFVTLEPCLMCTGAIIHARVARVVYAAAEPRSGMVESRANLFAQ 120

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
              +H  E+  G+   R+  +++ FF  RR
Sbjct: 121 PWFNHRVEVEGGVLASRATHLLKAFFAARR 150


>gi|218440469|ref|YP_002378798.1| CMP/dCMP deaminase zinc-binding [Cyanothece sp. PCC 7424]
 gi|218173197|gb|ACK71930.1| CMP/dCMP deaminase zinc-binding [Cyanothece sp. PCC 7424]
          Length = 162

 Score =  197 bits (502), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 56/148 (37%), Positives = 76/148 (51%), Gaps = 1/148 (0%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRM 61
               +MS A+  AQ AA   ++PVGAV +    K+I+   NR    +D TAHAEI+ +R 
Sbjct: 15  DHKRWMSRAITLAQEAAQAGDVPVGAVIIDEKGKLIAEGSNRKERDQDPTAHAEIIVLRR 74

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
             ++L    L +  LYVTLEPC MC  AI  ARI  L YG  +PK G I           
Sbjct: 75  ASQVLQTWHLQQCKLYVTLEPCPMCTGAIIQARIALLIYGVDDPKTGTIRTVANLPDSPC 134

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H   +  GI E   R  +Q +F ++R
Sbjct: 135 SNHRLSVISGIMESACRHQLQTWFAQKR 162


>gi|169351621|ref|ZP_02868559.1| hypothetical protein CLOSPI_02401 [Clostridium spiroforme DSM 1552]
 gi|169291843|gb|EDS73976.1| hypothetical protein CLOSPI_02401 [Clostridium spiroforme DSM 1552]
          Length = 148

 Score =  197 bits (502), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 59/149 (39%), Positives = 83/149 (55%), Gaps = 2/149 (1%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M +   FM  A +EA     ++E+PVGAV V NN++IS A N        TAHAEILAI 
Sbjct: 1   MNQDIKFMEIAYQEALKCLEKDEVPVGAVIVKNNEVISCAHNLRETTNLATAHAEILAIN 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
             C+ L    L E  LYVTLEPC MC+ AI  +RI+++ +GA   +   + +        
Sbjct: 61  EACKKLESWYLDECTLYVTLEPCVMCSGAIINSRIKKVVFGAFENRWLALTSIYN--CNF 118

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H PEI  GI   +  +II+++FK +R
Sbjct: 119 PVNHRPEIVTGILGDKCSKIIKEYFKIKR 147


>gi|53711997|ref|YP_097989.1| putative cytosine/adenosine deaminase [Bacteroides fragilis YCH46]
 gi|60680198|ref|YP_210342.1| cytosine deaminase [Bacteroides fragilis NCTC 9343]
 gi|253563968|ref|ZP_04841425.1| cytosine deaminase [Bacteroides sp. 3_2_5]
 gi|265765335|ref|ZP_06093610.1| ComE operon protein 2 [Bacteroides sp. 2_1_16]
 gi|52214862|dbj|BAD47455.1| putative cytosine/adenosine deaminase [Bacteroides fragilis YCH46]
 gi|60491632|emb|CAH06384.1| possible cytosine deaminase [Bacteroides fragilis NCTC 9343]
 gi|251947744|gb|EES88026.1| cytosine deaminase [Bacteroides sp. 3_2_5]
 gi|263254719|gb|EEZ26153.1| ComE operon protein 2 [Bacteroides sp. 2_1_16]
 gi|301161723|emb|CBW21263.1| possible cytosine deaminase [Bacteroides fragilis 638R]
          Length = 145

 Score =  197 bits (502), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 61/149 (40%), Positives = 79/149 (53%), Gaps = 5/149 (3%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M   + FM  AL EA  A  R E+PVGAV V   +II+RA N    L DVTAHAE+ AI 
Sbjct: 1   MLDDSYFMKQALIEAVKAGERGEVPVGAVVVCKERIIARAHNLTETLNDVTAHAEMQAIT 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
               +L  + L E  LYVT+EPC MCA AI+ A+  +L +GA + K G      Q Y   
Sbjct: 61  AAANVLGGKYLNECTLYVTVEPCVMCAGAIAWAQTGKLVFGAEDDKRG-----YQRYAPQ 115

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             H    +  GI       +++DFF  +R
Sbjct: 116 ALHPKTVVVKGILADECAGLMKDFFAAKR 144


>gi|288942407|ref|YP_003444647.1| CMP/dCMP deaminase protein [Allochromatium vinosum DSM 180]
 gi|288897779|gb|ADC63615.1| CMP/dCMP deaminase zinc-binding protein [Allochromatium vinosum DSM
           180]
          Length = 166

 Score =  197 bits (502), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 52/139 (37%), Positives = 73/139 (52%), Gaps = 1/139 (0%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
              +M  ALE A+ AA   E+PVGAV V   +I+    NR     D +AHAEI A+R   
Sbjct: 9   DVHWMRHALELARCAAEEGEVPVGAVLVREGEILGEGWNRPIIRHDPSAHAEIQALRDAG 68

Query: 64  RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFY-TLATC 122
           R +    LP   LYVTLEPC MCA AI  AR+ ++ YGA +PK G   +      +    
Sbjct: 69  RRVGNYRLPGSILYVTLEPCVMCAGAIVHARVAQVIYGAPDPKAGACGSVFDLLPSDGRF 128

Query: 123 HHSPEIYPGISEQRSRQII 141
           +H  E+  G+  +   +++
Sbjct: 129 NHRTEVRGGLLAEDCGEVL 147


>gi|332185526|ref|ZP_08387274.1| cytidine and deoxycytidylate deaminase zinc-binding region family
           protein [Sphingomonas sp. S17]
 gi|332014504|gb|EGI56561.1| cytidine and deoxycytidylate deaminase zinc-binding region family
           protein [Sphingomonas sp. S17]
          Length = 142

 Score =  197 bits (502), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 75/142 (52%), Positives = 93/142 (65%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  AL+ A+ A    E+PVGAV V + +++S A N  R L D TAHAEI AIR     L 
Sbjct: 1   MRLALDAARRAGEEGEVPVGAVIVRHGQVVSVAANAPRRLHDPTAHAEIQAIRAAAEKLG 60

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
           +E L E DL+VTLEPC MCA AI+ ARI RLYY AS+PKGG +E+G +F+   TCHH PE
Sbjct: 61  RERLEECDLWVTLEPCAMCAGAIAHARIARLYYAASDPKGGAVEHGPRFFGQPTCHHRPE 120

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
           IY GI E     +++ FF  RR
Sbjct: 121 IYAGIGEAEGAALLRSFFAARR 142


>gi|229816552|ref|ZP_04446851.1| hypothetical protein COLINT_03609 [Collinsella intestinalis DSM
           13280]
 gi|229807887|gb|EEP43690.1| hypothetical protein COLINT_03609 [Collinsella intestinalis DSM
           13280]
          Length = 632

 Score =  197 bits (502), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 57/148 (38%), Positives = 78/148 (52%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           +    FM  AL EA+ AA   E+P+GAV V    II+RA NR    +D +AHAE LA+  
Sbjct: 15  EDDERFMREALAEARAAAEVGEVPIGAVVVHKGTIIARAHNRRELDEDPSAHAEFLAMMQ 74

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
             R L +  L    +YVTLEPC MC+  +  ARI R  YGA++PKGG +           
Sbjct: 75  AARTLGRWRLSGCTVYVTLEPCLMCSGLMVNARIDRCVYGATDPKGGALGTLYDVSADPR 134

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H+  +  GI E      ++ FF+  R
Sbjct: 135 LNHAFPVVSGILEDECAAELRSFFRRLR 162


>gi|194366203|ref|YP_002028813.1| CMP/dCMP deaminase zinc-binding [Stenotrophomonas maltophilia
           R551-3]
 gi|194349007|gb|ACF52130.1| CMP/dCMP deaminase zinc-binding [Stenotrophomonas maltophilia
           R551-3]
          Length = 174

 Score =  197 bits (502), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 56/150 (37%), Positives = 82/150 (54%), Gaps = 2/150 (1%)

Query: 2   KKGNVFMSCALEEAQNAALR-NEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAI 59
                +M  AL  A+ A    +EIPVGAV V  + +++    N N    D +AHAEI+A+
Sbjct: 11  DTDEHWMRHALALAERAQREFDEIPVGAVLVSADGQLLGEGWNLNIASHDPSAHAEIVAM 70

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
           R G ++L+   L    LYVTLEPC MCA AI  AR+ RL YGAS+PK G   +       
Sbjct: 71  RSGGKLLANHRLLGSTLYVTLEPCAMCAMAIVHARVARLVYGASDPKTGACGSVFDLLGD 130

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
              +H  EI+ G+  + +   + ++F+ +R
Sbjct: 131 GRHNHRVEIHGGVLAKEASMRLTNYFRTKR 160


>gi|332519171|ref|ZP_08395638.1| CMP/dCMP deaminase, zinc-binding [Lacinutrix algicola 5H-3-7-4]
 gi|332045019|gb|EGI81212.1| CMP/dCMP deaminase, zinc-binding [Lacinutrix algicola 5H-3-7-4]
          Length = 149

 Score =  197 bits (502), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 59/147 (40%), Positives = 84/147 (57%), Gaps = 6/147 (4%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
             N FM  AL+EA+ A  + EIPVGAV V+ N+II+RA N    L DVTAHAE+ AI   
Sbjct: 6   DDNYFMKKALQEAEVAFDKGEIPVGAVIVIENRIIARAHNLTELLNDVTAHAEMQAITAA 65

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
              L  + L    LYVTLEPC MCA A+  +++ ++ YGA + + G I   T+       
Sbjct: 66  ANFLGGKYLKNCTLYVTLEPCQMCAGALYWSQVSKIVYGARDEERGCINLQTKL------ 119

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           H   ++  GI  + +  +++ FF E+R
Sbjct: 120 HPKTKLEGGILAKEASSLMKRFFIEKR 146


>gi|319790641|ref|YP_004152274.1| CMP/dCMP deaminase zinc-binding protein [Thermovibrio ammonificans
           HB-1]
 gi|317115143|gb|ADU97633.1| CMP/dCMP deaminase zinc-binding protein [Thermovibrio ammonificans
           HB-1]
          Length = 148

 Score =  197 bits (502), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 54/147 (36%), Positives = 84/147 (57%), Gaps = 1/147 (0%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
               F+  AL EA+ A    E+P+GAV V N ++I++A NR   L+D TAHAE++AIR  
Sbjct: 2   NDLYFLRLALREAEKALSFGEVPIGAVVVRNGEVIAKAFNRKEFLQDPTAHAELIAIREA 61

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
            R L+   L +  +Y T+EPC MC  AI  +RI+R+ Y   +PK GG+E+  +       
Sbjct: 62  ARKLNSWRLNDCTIYSTVEPCIMCCGAIIQSRIKRVVYSTPDPKFGGVESLYRLLGDERN 121

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H PE+      +   ++++ FF+  R
Sbjct: 122 NHRPEVVKLELPES-EELLKAFFRSLR 147


>gi|299143513|ref|ZP_07036593.1| cytidine/deoxycytidylate deaminase family protein [Peptoniphilus
           sp. oral taxon 386 str. F0131]
 gi|298517998|gb|EFI41737.1| cytidine/deoxycytidylate deaminase family protein [Peptoniphilus
           sp. oral taxon 386 str. F0131]
          Length = 153

 Score =  197 bits (502), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 54/149 (36%), Positives = 86/149 (57%), Gaps = 1/149 (0%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M + + FM+ AL+ A+ +    +IP+GA+ V N++II R  N+   LKD +AHAE++A++
Sbjct: 1   MNRNDFFMNEALKLAKISYDNGDIPIGAIIVFNDEIIGRGFNKKELLKDASAHAELIAMK 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              + L+   L +  +YVTLEPC MCA AI   R++++Y GA N + G   +        
Sbjct: 61  EASKFLNSYHLEDCTMYVTLEPCAMCAGAILNFRLKKIYIGAKNERFGCCGSKINLLN-Y 119

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H+ E   GI E   + +I +FF E R
Sbjct: 120 NFNHTCECEFGILEDDCKNLISNFFIELR 148


>gi|62262991|gb|AAX78118.1| unknown protein [synthetic construct]
          Length = 188

 Score =  197 bits (502), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 49/148 (33%), Positives = 76/148 (51%), Gaps = 1/148 (0%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
            +   FM  A ++A  A    E+P+GAV V +++II +  N+   L D TAHAEIL +R 
Sbjct: 32  DQDIFFMQKAYQQALLAYQAGEVPIGAVLVRDDQIIVQNFNQTIGLNDPTAHAEILVLRS 91

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
               L    L    LYVTLEPC MC   +  AR+  L Y   + + G   +  + +    
Sbjct: 92  AALKLGNYRLVNTKLYVTLEPCIMCLGGLIQARVPELVYACDDSRVGAF-SREKLHHNKN 150

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H+  +  G+      ++++DFFK+RR
Sbjct: 151 INHNLGVTAGVMADECSKLLKDFFKQRR 178


>gi|190571610|ref|YP_001975968.1| cytidine and deoxycytidylate deaminase family protein [Wolbachia
           endosymbiont of Culex quinquefasciatus Pel]
 gi|190357882|emb|CAQ55341.1| cytidine and deoxycytidylate deaminase family protein [Wolbachia
           endosymbiont of Culex quinquefasciatus Pel]
          Length = 141

 Score =  197 bits (501), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 71/144 (49%), Positives = 95/144 (65%), Gaps = 8/144 (5%)

Query: 6   VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
            +M+ A+E+A+ A    E+P+GAV V  N IIS A N      D TAHAE+L IR     
Sbjct: 5   QYMALAIEQAKLAQKDGEVPIGAVIVNGNNIISSAHN---ISNDPTAHAEMLTIRQA--- 58

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
            S   L E ++YVTLEPC MCA AIS A+I+RLY+GA NPKGGG+ENGT+ +    C+H 
Sbjct: 59  FSTSTLYEAEMYVTLEPCPMCAQAISFAKIKRLYFGAYNPKGGGVENGTRIFQF--CNHI 116

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
           PE+Y GI E +   +++DFF++ R
Sbjct: 117 PEVYGGILETKCSLLLKDFFEKLR 140


>gi|307152204|ref|YP_003887588.1| CMP/dCMP deaminase zinc-binding protein [Cyanothece sp. PCC 7822]
 gi|306982432|gb|ADN14313.1| CMP/dCMP deaminase zinc-binding protein [Cyanothece sp. PCC 7822]
          Length = 162

 Score =  197 bits (501), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 61/148 (41%), Positives = 80/148 (54%), Gaps = 1/148 (0%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           K   +MS A+  AQ AAL  ++PVGAV +    ++I+ A NR    +D TAHAEIL +R 
Sbjct: 15  KHQQWMSRAIVLAQQAALAGDVPVGAVILDREGRLIAEASNRKERDQDPTAHAEILVLRR 74

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
             +IL    L    LYVTLEPC MC  AI  ARI  L YG  +PK G I         + 
Sbjct: 75  ASQILKTWHLEACYLYVTLEPCPMCTGAIIQARIGLLVYGVDDPKTGTIRTVANLPDSSC 134

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H   +  GI E   R+ +Q +F +RR
Sbjct: 135 SNHRLSVLSGIMESACREQLQTWFAQRR 162


>gi|118496774|ref|YP_897824.1| zinc-binding protein [Francisella tularensis subsp. novicida U112]
 gi|118422680|gb|ABK89070.1| zinc-binding protein [Francisella novicida U112]
          Length = 153

 Score =  197 bits (501), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 49/148 (33%), Positives = 76/148 (51%), Gaps = 1/148 (0%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
            +   FM  A ++A  A    E+P+GAV V + +II++  N+   L D TAHAEIL +R 
Sbjct: 6   DQDIFFMQKAYQQALLAYQAGEVPIGAVLVRDGQIIAQNFNQTIGLNDPTAHAEILVLRS 65

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
               L    L    LYVTLEPC MC   +  AR+  L Y   + + G   +  + +    
Sbjct: 66  AALKLDNYRLVNTKLYVTLEPCIMCLGGLIQARVPELVYACDDSRVGAF-SREKLHHNKN 124

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H+  +  G+      ++++DFFK+RR
Sbjct: 125 INHNLGVTAGVMADECGKLLKDFFKQRR 152


>gi|116617403|ref|YP_817774.1| tRNA-adenosine deaminase [Leuconostoc mesenteroides subsp.
           mesenteroides ATCC 8293]
 gi|116096250|gb|ABJ61401.1| tRNA-adenosine deaminase [Leuconostoc mesenteroides subsp.
           mesenteroides ATCC 8293]
          Length = 168

 Score =  197 bits (501), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 59/148 (39%), Positives = 81/148 (54%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           ++ + FM  AL EA+ A    E+P+GAV V  N++I+ A N     +  TAHAE+LAI  
Sbjct: 10  EQIDYFMQEALNEAKIAQSEGEVPIGAVIVYENQMIACAHNHREADQLATAHAELLAIES 69

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
               L    L    L+VTLEPC MCA AI  ARI  +YYGA++PKGG   +         
Sbjct: 70  ANTKLKSWRLENTALFVTLEPCIMCAGAIINARIPVVYYGANDPKGGATRSLYSLLEDNR 129

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H  ++Y GI  + S  ++Q FF   R
Sbjct: 130 LNHMVKVYEGIRGEESGLLLQRFFSNIR 157


>gi|86748295|ref|YP_484791.1| CMP/dCMP deaminase, zinc-binding [Rhodopseudomonas palustris HaA2]
 gi|86571323|gb|ABD05880.1| tRNA-adenosine deaminase [Rhodopseudomonas palustris HaA2]
          Length = 148

 Score =  197 bits (501), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 70/127 (55%), Positives = 92/127 (72%)

Query: 23  EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEP 82
           E+P+G V V    +I+ AGNR    +D TAHAE+LAIR   R L  E L + DLYVTLEP
Sbjct: 22  EVPIGCVIVRAGAVIASAGNRTLTDRDPTAHAELLAIREAARKLGSERLVDCDLYVTLEP 81

Query: 83  CTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQ 142
           CTMCA AIS ARIRRLY+GA +PKGG +E+G +F+   TCHH+PEIY G+ E+ +  +++
Sbjct: 82  CTMCAGAISFARIRRLYFGAFDPKGGAVESGVRFFGQPTCHHAPEIYSGVGEREAAALLR 141

Query: 143 DFFKERR 149
           +FF+ RR
Sbjct: 142 EFFRARR 148


>gi|116333248|ref|YP_794775.1| cytosine/adenosine deaminase [Lactobacillus brevis ATCC 367]
 gi|116098595|gb|ABJ63744.1| tRNA-adenosine deaminase [Lactobacillus brevis ATCC 367]
          Length = 183

 Score =  197 bits (501), Expect = 6e-49,   Method: Composition-based stats.
 Identities = 52/140 (37%), Positives = 79/140 (56%)

Query: 6   VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
            +M  AL EA+ AA+  E+P+G+V V + +II R  N      D T HAEI AI   C  
Sbjct: 12  HYMEEALFEAEQAAVIGEVPIGSVIVHDGQIIGRGHNLREHGHDATLHAEIRAIEEACAT 71

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           L    L +  LYVT+EPC MC+ AI  ARI  ++YGA +PK G +++     T +  +H+
Sbjct: 72  LQSWRLNDCQLYVTIEPCLMCSGAIINARIPEVFYGARDPKAGAVDSLYATLTDSRLNHT 131

Query: 126 PEIYPGISEQRSRQIIQDFF 145
             ++ G+  + + + +  FF
Sbjct: 132 VAVHEGLLAKDAGERMVAFF 151


>gi|167563146|ref|ZP_02356062.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia
           oklahomensis EO147]
 gi|167570332|ref|ZP_02363206.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia
           oklahomensis C6786]
          Length = 193

 Score =  197 bits (501), Expect = 6e-49,   Method: Composition-based stats.
 Identities = 55/148 (37%), Positives = 79/148 (53%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           ++   +M  ALE A  A    E+PVGAV V  +++I+R  N      D +AHAE+ A+R 
Sbjct: 26  ERDRRYMRMALEAADEARAAGEVPVGAVIVRGDEVIARGFNHPIGGHDPSAHAEMAALRA 85

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
             R L    +P  +LYVTLEPC MC+ AI  ARI R+ +GA +PK G   +    +  A 
Sbjct: 86  AARALRNYRMPGCELYVTLEPCLMCSGAIMHARIARVVFGAPDPKTGACGSVVDAFADAR 145

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H   +  G+        ++ FF ERR
Sbjct: 146 LNHHTAVEGGVLADECGAALKSFFAERR 173


>gi|319936699|ref|ZP_08011112.1| tRNA-adenosine deaminase [Coprobacillus sp. 29_1]
 gi|319808256|gb|EFW04821.1| tRNA-adenosine deaminase [Coprobacillus sp. 29_1]
          Length = 148

 Score =  197 bits (501), Expect = 6e-49,   Method: Composition-based stats.
 Identities = 60/147 (40%), Positives = 87/147 (59%), Gaps = 3/147 (2%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
               +M  A +EA  A   +E+P+GA+ V ++ +I+ A N+    +DVTAHAE+LAI+  
Sbjct: 2   TDIEYMKLAYQEAIKAKDIDEVPIGAIIVKDDCVIASAYNQKESKRDVTAHAEMLAIQKA 61

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
           C+IL    L    LY TLEPC MC+ AI  +RI ++ YGAS  +  GI    Q+    T 
Sbjct: 62  CKILGTWHLDGCTLYSTLEPCMMCSGAIIQSRIAKVVYGASGQRWHGIS---QYLHNHTF 118

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H P+I  GI E+   Q+I D+FK +R
Sbjct: 119 NHYPDITSGILEEDCCQLISDYFKSKR 145


>gi|237748635|ref|ZP_04579115.1| tRNA-specific adenosine deaminase [Oxalobacter formigenes OXCC13]
 gi|229379997|gb|EEO30088.1| tRNA-specific adenosine deaminase [Oxalobacter formigenes OXCC13]
          Length = 171

 Score =  197 bits (501), Expect = 6e-49,   Method: Composition-based stats.
 Identities = 56/147 (38%), Positives = 82/147 (55%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
              +FM  AL +A  A    E+PVGAV VL+ +II+R  N+     D TAHAEI+A+R  
Sbjct: 2   SDEIFMREALAQAALAEEAGEVPVGAVVVLDGQIIARGFNQPITAHDPTAHAEIVALRNA 61

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
            R      LP+ +LYVTLEPC+MC  A+  AR++R+ +GA  P+ G   +    +     
Sbjct: 62  ARFCGNYRLPDCELYVTLEPCSMCVGAMIHARLKRVIFGAKEPRTGACGSIIDLFAQNEL 121

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H   +  G+ E  S  +++ FF  RR
Sbjct: 122 NHHTTVTGGVLENESSVLLKTFFAGRR 148


>gi|212550942|ref|YP_002309259.1| cytosine/adenosine deaminase [Candidatus Azobacteroides
           pseudotrichonymphae genomovar. CFP2]
 gi|212549180|dbj|BAG83848.1| putative cytosine/adenosine deaminase [Candidatus Azobacteroides
           pseudotrichonymphae genomovar. CFP2]
          Length = 146

 Score =  197 bits (501), Expect = 6e-49,   Method: Composition-based stats.
 Identities = 54/149 (36%), Positives = 82/149 (55%), Gaps = 5/149 (3%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +++   +M  AL EAQ A  + E+P+GAV V + +II+R+ N    L D TAHAE+ AI 
Sbjct: 2   LQEDEYYMKQALLEAQKAFEKAEVPIGAVIVSDKRIIARSHNLTETLNDTTAHAEMQAIT 61

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
                L  + L    LYVT+EPC MCA A++ A+I+R+ YG  + K G         T  
Sbjct: 62  AASIALGGKYLTNCVLYVTVEPCPMCAGALAWAQIKRIVYGIKDEKRG-----YHKITPF 116

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             H   ++   I  + S  +++ FFK++R
Sbjct: 117 ILHPKTKVTSKILAEESGFLMKKFFKDKR 145


>gi|154494050|ref|ZP_02033370.1| hypothetical protein PARMER_03395 [Parabacteroides merdae ATCC
           43184]
 gi|154086310|gb|EDN85355.1| hypothetical protein PARMER_03395 [Parabacteroides merdae ATCC
           43184]
          Length = 147

 Score =  197 bits (501), Expect = 6e-49,   Method: Composition-based stats.
 Identities = 59/147 (40%), Positives = 82/147 (55%), Gaps = 5/147 (3%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
               FM  AL EA +AA   E+PVGAV V NN+II+RA N+   L D TAHAE+LAI   
Sbjct: 6   NDEYFMKQALVEACSAAEEGEVPVGAVIVCNNQIIARAHNQTERLNDPTAHAEMLAITAA 65

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
             +L  + L    LYVT+EPC MCA AI  +++ ++ YGA++ K G      Q Y     
Sbjct: 66  VGVLGAKYLTGCSLYVTVEPCVMCAGAIGWSQLSKIVYGATDEKRG-----FQQYAPKAL 120

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           H    +  G+ E    + ++ FF+ +R
Sbjct: 121 HPKATVKKGVLENECAEEMRKFFQRKR 147


>gi|328954698|ref|YP_004372031.1| tRNA-adenosine deaminase [Coriobacterium glomerans PW2]
 gi|328455022|gb|AEB06216.1| tRNA-adenosine deaminase [Coriobacterium glomerans PW2]
          Length = 165

 Score =  196 bits (500), Expect = 7e-49,   Method: Composition-based stats.
 Identities = 48/147 (32%), Positives = 73/147 (49%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
               FM  AL +A+ AA   E+P+GA  V     I+RA NR     + +AHAE +A+   
Sbjct: 14  DDARFMREALAQARMAAELGEVPIGAAVVYEGDCIARAHNRRELDGNPSAHAEFVAMLKA 73

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
             +L +  L    +YVT+EPC MCA  +  ARI R  +GAS+PKGG +            
Sbjct: 74  SAVLGRWRLTGCTVYVTVEPCLMCAGLMVNARIDRCVFGASDPKGGALGTLFDVSRDPRL 133

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H+  +   +  +    ++  FF + R
Sbjct: 134 NHAFGVTRDVEREECSDLLTTFFADLR 160


>gi|307544260|ref|YP_003896739.1| CMP/dCMP deaminase, zinc-binding [Halomonas elongata DSM 2581]
 gi|307216284|emb|CBV41554.1| CMP/dCMP deaminase, zinc-binding [Halomonas elongata DSM 2581]
          Length = 155

 Score =  196 bits (500), Expect = 7e-49,   Method: Composition-based stats.
 Identities = 53/150 (35%), Positives = 78/150 (52%), Gaps = 1/150 (0%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAI 59
           M+    +M  A+++A+ A    E+PVGAV V    +I+    N      D +AHAEI A+
Sbjct: 1   MRSDEYYMHRAMDQARRAEAAGEVPVGAVVVDRAGEIVGSGFNAPVSDHDPSAHAEIRAL 60

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
           R     L    L    L+VTLEPC MC  AI  AR+ R+ YGA+ P+ G +E+    +  
Sbjct: 61  RDAGTRLGNYRLDGCTLFVTLEPCLMCTGAIIHARLARVVYGAAEPRSGMVESRANLFAQ 120

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
              +H  E+  G+   R  + ++ FF ERR
Sbjct: 121 PWYNHRVEVVGGVLAPRIAKHLKAFFAERR 150


>gi|300865868|ref|ZP_07110611.1| tRNA-adenosine deaminase [Oscillatoria sp. PCC 6506]
 gi|300336131|emb|CBN55769.1| tRNA-adenosine deaminase [Oscillatoria sp. PCC 6506]
          Length = 169

 Score =  196 bits (500), Expect = 7e-49,   Method: Composition-based stats.
 Identities = 60/148 (40%), Positives = 75/148 (50%), Gaps = 1/148 (0%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRM 61
               +MS A++ AQ A    E+PVGA  V    K+I++  NR     D TAHAEILA+R 
Sbjct: 17  THCQWMSRAIKLAQEAGEAGEVPVGAAIVDSQGKLIAQGQNRRERDCDPTAHAEILALRG 76

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
               L    L    LYVTLEPC MCA AI  ARI  L YG  +PK G I           
Sbjct: 77  AGIALQNWHLNACTLYVTLEPCPMCAGAIVQARIGLLVYGVDDPKSGTIRTVGNIPDSDC 136

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H   +  GI E   R+ +Q +F +RR
Sbjct: 137 SYHRLPVLGGIMESECREQLQSWFAKRR 164


>gi|15893419|ref|NP_346768.1| cytosine deaminase [Clostridium acetobutylicum ATCC 824]
 gi|15022950|gb|AAK78108.1|AE007525_2 Cytosine deaminase [Clostridium acetobutylicum ATCC 824]
 gi|325507531|gb|ADZ19167.1| Cytosine deaminase [Clostridium acetobutylicum EA 2018]
          Length = 147

 Score =  196 bits (500), Expect = 7e-49,   Method: Composition-based stats.
 Identities = 56/149 (37%), Positives = 82/149 (55%), Gaps = 3/149 (2%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           MK  N F++ A++EA+ A    E+PVGAV V +NKII+ + N    LK+ +AHAEI+AI 
Sbjct: 1   MK--NEFLNEAIKEAKLAKKEGEVPVGAVIVKDNKIIATSHNLKESLKNPSAHAEIIAIE 58

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              + L+   L   ++YVTLEPC MCAA I  +RI ++Y G  +P  G   +        
Sbjct: 59  RAAKYLNNWRLNGCEMYVTLEPCPMCAACICQSRISKVYVGTFDPISGACGSVVNITEND 118

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
              +  E+   +       I++ FFK RR
Sbjct: 119 YLRYHTEVEW-LYSNECSDILKGFFKARR 146


>gi|225630106|ref|YP_002726897.1| cytidine and deoxycytidylate deaminase family protein [Wolbachia
           sp. wRi]
 gi|225592087|gb|ACN95106.1| cytidine and deoxycytidylate deaminase family protein [Wolbachia
           sp. wRi]
          Length = 135

 Score =  196 bits (500), Expect = 7e-49,   Method: Composition-based stats.
 Identities = 72/142 (50%), Positives = 92/142 (64%), Gaps = 8/142 (5%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  A+E+A+ A   +E+P+GAV V  + IIS A N      D TAHAE+LAIR      S
Sbjct: 1   MELAIEQAKLAQKNDEVPIGAVIVSGDNIISSAHN---ISSDPTAHAEMLAIRQA---FS 54

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
              L + D+YVTLEPC MCA AIS ARI+RLY+GA NPKGGGIENG + +    C H PE
Sbjct: 55  TSTLCDTDMYVTLEPCPMCAQAISFARIKRLYFGAYNPKGGGIENGAKIFQF--CSHIPE 112

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
           +Y GI E     +++DFF++ R
Sbjct: 113 VYGGILETECSFLLKDFFEKLR 134


>gi|254425304|ref|ZP_05039022.1| Cytidine and deoxycytidylate deaminase zinc-binding region domain
           protein [Synechococcus sp. PCC 7335]
 gi|196192793|gb|EDX87757.1| Cytidine and deoxycytidylate deaminase zinc-binding region domain
           protein [Synechococcus sp. PCC 7335]
          Length = 162

 Score =  196 bits (500), Expect = 7e-49,   Method: Composition-based stats.
 Identities = 56/137 (40%), Positives = 79/137 (57%), Gaps = 1/137 (0%)

Query: 14  EAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILP 72
            AQ A    E+PV A+ V  +N++++ A NR    +D TAHAE+LAIR   + L    L 
Sbjct: 7   LAQEAGTAGEVPVAAIIVGPDNQLVASAANRKERDQDPTAHAEVLAIRAAAKHLGDWHLN 66

Query: 73  EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGI 132
           +  LYVTLEPC MCA AI  AR+  L YG S+PK G I +        + +H   +  G+
Sbjct: 67  QCTLYVTLEPCPMCAGAIIHARLGLLVYGTSDPKTGAIRSVLNLPDGPSSNHKLVVIGGV 126

Query: 133 SEQRSRQIIQDFFKERR 149
            E   +Q +QD+FK++R
Sbjct: 127 LETVCKQQLQDWFKQKR 143


>gi|149375103|ref|ZP_01892875.1| cytidine/deoxycytidylate deaminase family protein [Marinobacter
           algicola DG893]
 gi|149360467|gb|EDM48919.1| cytidine/deoxycytidylate deaminase family protein [Marinobacter
           algicola DG893]
          Length = 166

 Score =  196 bits (500), Expect = 7e-49,   Method: Composition-based stats.
 Identities = 57/144 (39%), Positives = 74/144 (51%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           ++   +MS AL+ A  A    E+PVGAV VL+ K I    N      D TAHAEI A+R 
Sbjct: 5   EEDEAWMSRALQLAGQAGAAGEVPVGAVVVLDGKEIGTGFNAPISGCDPTAHAEIRALRD 64

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
               +    LP   LYVTLEPCTMC  AI  +RI RL YGA+ PK G + +  Q      
Sbjct: 65  AAARVGNYRLPGATLYVTLEPCTMCVGAIVHSRISRLVYGAAEPKAGAVASARQTLNEPH 124

Query: 122 CHHSPEIYPGISEQRSRQIIQDFF 145
            +   E   G+   +   +I +FF
Sbjct: 125 LNWRVESVGGVLADQCSHVISEFF 148


>gi|254412813|ref|ZP_05026586.1| Cytidine and deoxycytidylate deaminase zinc-binding region domain
           protein [Microcoleus chthonoplastes PCC 7420]
 gi|196180548|gb|EDX75539.1| Cytidine and deoxycytidylate deaminase zinc-binding region domain
           protein [Microcoleus chthonoplastes PCC 7420]
          Length = 186

 Score =  196 bits (500), Expect = 8e-49,   Method: Composition-based stats.
 Identities = 60/149 (40%), Positives = 84/149 (56%), Gaps = 1/149 (0%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIR 60
           +K   +M+ +L  AQ+A    E+PVGAV + N + +I+   NR    +D TAHAEILA+R
Sbjct: 11  QKHRHWMNRSLAIAQSAGEAGEVPVGAVIIDNQDNLIATGENRRERDRDPTAHAEILALR 70

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              + L+   L    LYVTLEPC MC+ AI LAR+  L YGA +PK G I         A
Sbjct: 71  AAGQALNTWHLNTCTLYVTLEPCAMCSGAIILARLGLLVYGADDPKTGTIRTVANSPDSA 130

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H   +  GI E   R+ ++ +F +RR
Sbjct: 131 YSNHRLPVLAGIMETECREYLKSWFAQRR 159


>gi|328676234|gb|AEB27104.1| tRNA-specific adenosine-34 deaminase [Francisella cf. novicida Fx1]
          Length = 153

 Score =  196 bits (500), Expect = 8e-49,   Method: Composition-based stats.
 Identities = 49/148 (33%), Positives = 77/148 (52%), Gaps = 1/148 (0%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
            +   FM  A ++A  A    E+P+GAV V +++II++  N+   L D TAHAEIL +R 
Sbjct: 6   DQDIFFMQKAYQQALLAYQAGEVPIGAVLVRDDQIIAQNFNQTIGLNDPTAHAEILVLRS 65

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
               L    L    LYVTLEPC MC   +  AR+  L Y   + + G   +  + +    
Sbjct: 66  AALKLDNYRLVNTKLYVTLEPCIMCLGGLIQARVPELVYACDDSRVGAF-SREKLHHNKN 124

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H+  +  G+      ++++DFFK+RR
Sbjct: 125 INHNLGVTAGVMADECGKLLKDFFKQRR 152


>gi|313812411|gb|EFS50125.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Propionibacterium acnes HL025PA1]
 gi|327334354|gb|EGE76065.1| tRNA-specific adenosine deaminase [Propionibacterium acnes
           HL097PA1]
          Length = 149

 Score =  196 bits (500), Expect = 8e-49,   Method: Composition-based stats.
 Identities = 54/143 (37%), Positives = 79/143 (55%), Gaps = 1/143 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M+ AL+ A+ AA   ++P+GAV +  N +++S AGN      D TAHAE+LAIR      
Sbjct: 1   MTQALDVARRAATWGDVPIGAVILGANGEVLSEAGNERERTGDPTAHAEVLAIRRAAEAR 60

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  L VTLEPCTMCA  I  ARI R+ +GA +PK G + +           H P
Sbjct: 61  DGWRLGDCTLVVTLEPCTMCAGTIVAARIPRVVFGAFDPKAGAVSSLFDVMRDPRLPHRP 120

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           ++  G+  + S  ++++FF   R
Sbjct: 121 KVVTGVMAEESSALLREFFDGHR 143


>gi|39934239|ref|NP_946515.1| CMP/dCMP deaminase zinc-binding [Rhodopseudomonas palustris CGA009]
 gi|192289765|ref|YP_001990370.1| CMP/dCMP deaminase zinc-binding [Rhodopseudomonas palustris TIE-1]
 gi|39648087|emb|CAE26607.1| possible cytidine and deoxycytidylate deaminase [Rhodopseudomonas
           palustris CGA009]
 gi|192283514|gb|ACE99894.1| CMP/dCMP deaminase zinc-binding [Rhodopseudomonas palustris TIE-1]
          Length = 148

 Score =  196 bits (500), Expect = 8e-49,   Method: Composition-based stats.
 Identities = 69/128 (53%), Positives = 92/128 (71%)

Query: 22  NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81
            E+P+G V V +  +I++AGNR    +D TAHAE+LAIR     L  E L + DLYVTLE
Sbjct: 21  GEVPIGCVIVRDGVVIAKAGNRTLTDRDPTAHAELLAIREAAAKLGSERLVDCDLYVTLE 80

Query: 82  PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141
           PCTMCA AIS ARIRRLY+GA +PKGG +E+G +FY   TCHH+PE+Y  + E+ +  ++
Sbjct: 81  PCTMCAGAISFARIRRLYFGAFDPKGGAVESGVRFYGQPTCHHAPEVYSAVGEREAATML 140

Query: 142 QDFFKERR 149
           ++FFK RR
Sbjct: 141 REFFKARR 148


>gi|329889978|ref|ZP_08268321.1| tRNA-specific adenosine deaminase [Brevundimonas diminuta ATCC
           11568]
 gi|328845279|gb|EGF94843.1| tRNA-specific adenosine deaminase [Brevundimonas diminuta ATCC
           11568]
          Length = 154

 Score =  196 bits (500), Expect = 8e-49,   Method: Composition-based stats.
 Identities = 60/142 (42%), Positives = 84/142 (59%), Gaps = 2/142 (1%)

Query: 10  CALEEAQNAALRNEIPVGAVAVLN--NKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
            AL+ AQ AA   E+PVGAV V     +++ R  N      D +AHAEI+A+R     L 
Sbjct: 1   MALDLAQAAAEAGEVPVGAVIVDENTGEVLGRGQNGPITAHDPSAHAEIVALRDAAAKLQ 60

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
              L ++ LYVTLEPC MCA AIS ARI R+ +GA +PKGG + +G +F+   TCH  P 
Sbjct: 61  NYRLTDLTLYVTLEPCAMCAGAISHARIGRVVWGADDPKGGAVLHGGRFFDQPTCHWRPR 120

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
              G+    + ++++ FF+ RR
Sbjct: 121 TESGVMADPAAEMLRSFFRSRR 142


>gi|295132290|ref|YP_003582966.1| cytidine/deoxycytidylate deaminase family protein [Zunongwangia
           profunda SM-A87]
 gi|294980305|gb|ADF50770.1| cytidine/deoxycytidylate deaminase family protein [Zunongwangia
           profunda SM-A87]
          Length = 149

 Score =  196 bits (499), Expect = 9e-49,   Method: Composition-based stats.
 Identities = 56/147 (38%), Positives = 77/147 (52%), Gaps = 6/147 (4%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
               FM  A EEAQ A  + EIPVG V V+ N+II+R  N    L DVTAHAE+ +I   
Sbjct: 6   DDTYFMKKAFEEAQIAFEKGEIPVGVVVVIKNRIIARGHNLTETLNDVTAHAEMQSITAA 65

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
              L  + L    +YVTLEPC MCA A+  +++ RL + A +   G  + G Q       
Sbjct: 66  ASFLGGKYLKGCTMYVTLEPCQMCAGALYWSQLSRLVFAAKDDHRGYQKFGVQL------ 119

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           H   E+  GI      Q+++ FF ++R
Sbjct: 120 HPKTEVSQGIMANECSQLLKKFFIQKR 146


>gi|327481727|gb|AEA85037.1| cytidine/deoxycytidylate deaminase [Pseudomonas stutzeri DSM 4166]
          Length = 160

 Score =  196 bits (499), Expect = 9e-49,   Method: Composition-based stats.
 Identities = 54/148 (36%), Positives = 81/148 (54%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
            +   FM  A+  A   A   E+PVGAV V   +I+ R  N      D +AHAE++AIR 
Sbjct: 10  SQDERFMREAMALAAQGAALGEVPVGAVLVHEGQIVGRGFNCPISRHDPSAHAEMVAIRA 69

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
             + L    LP   LYVTLEPC+MCA  I  +R++R+ YGA+ PK G + +  QF+    
Sbjct: 70  AAQALQNYRLPGSTLYVTLEPCSMCAGLIVHSRVQRVVYGATEPKAGVVVSRGQFFDQGF 129

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H   +  G+  +    ++ +FF++RR
Sbjct: 130 LNHRVLVEGGVLAEECGAVLSEFFRQRR 157


>gi|224538014|ref|ZP_03678553.1| hypothetical protein BACCELL_02903 [Bacteroides cellulosilyticus
           DSM 14838]
 gi|224520361|gb|EEF89466.1| hypothetical protein BACCELL_02903 [Bacteroides cellulosilyticus
           DSM 14838]
          Length = 144

 Score =  196 bits (499), Expect = 9e-49,   Method: Composition-based stats.
 Identities = 60/147 (40%), Positives = 82/147 (55%), Gaps = 5/147 (3%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
             N +M  AL EA+ A+ R E+PVGAV V  ++II+RA N    L DVTAHAE+ AI   
Sbjct: 2   DDNYYMKQALIEARKASERGEVPVGAVVVCKDRIIARAHNLTETLTDVTAHAEMQAITAA 61

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
              L  + L E  LYVT+EPC MCA AI+ A++ RL +GA + K G      Q Y     
Sbjct: 62  ASTLGGKYLNECTLYVTVEPCVMCAGAIAWAQMGRLVFGAGDEKRG-----YQRYASQAL 116

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           H    +  G+  +    +++DFF  +R
Sbjct: 117 HPKTAVSQGVLGEECAVLMKDFFAAKR 143


>gi|217967615|ref|YP_002353121.1| CMP/dCMP deaminase zinc-binding [Dictyoglomus turgidum DSM 6724]
 gi|217336714|gb|ACK42507.1| CMP/dCMP deaminase zinc-binding [Dictyoglomus turgidum DSM 6724]
          Length = 156

 Score =  196 bits (499), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 53/146 (36%), Positives = 74/146 (50%), Gaps = 2/146 (1%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
              FM  A++EA+ A  + E+PVGAV V N +I+ R  N     K+  +HAE++AI    
Sbjct: 9   DEYFMHEAIKEAKKALRKGEVPVGAVIVYNGQIVGRGYNLRESKKNPISHAEMIAIEKAA 68

Query: 64  RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123
           + L    L    LYVTLEPC MC  AI  +RI RL YG  N + G  +            
Sbjct: 69  KKLKGWRLCNCTLYVTLEPCIMCFGAILNSRISRLVYGTENREEGFTQFVN--IRDYKKW 126

Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149
              EI  GI +     ++++FFK+ R
Sbjct: 127 KDIEIISGIKKDVCESLLKEFFKDMR 152


>gi|56707349|ref|YP_169245.1| zinc-binding domain-containing protein [Francisella tularensis
           subsp. tularensis SCHU S4]
 gi|110669819|ref|YP_666376.1| zinc-binding domain-containing protein [Francisella tularensis
           subsp. tularensis FSC198]
 gi|56603841|emb|CAG44817.1| Zinc-binding domain protein [Francisella tularensis subsp.
           tularensis SCHU S4]
 gi|110320152|emb|CAL08200.1| Zinc-binding domain protein [Francisella tularensis subsp.
           tularensis FSC198]
 gi|282158481|gb|ADA77872.1| Zinc-binding domain protein [Francisella tularensis subsp.
           tularensis NE061598]
          Length = 153

 Score =  196 bits (499), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 49/148 (33%), Positives = 76/148 (51%), Gaps = 1/148 (0%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
            +   FM  A ++A  A    E+P+GAV V +++II +  N+   L D TAHAEIL +R 
Sbjct: 6   DQDIFFMQKAYQQALLAYQAGEVPIGAVLVRDDQIIVQNFNQTIGLNDPTAHAEILVLRS 65

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
               L    L    LYVTLEPC MC   +  AR+  L Y   + + G   +  + +    
Sbjct: 66  AALKLGNYRLVNTKLYVTLEPCIMCLGGLIQARVPELVYACDDSRVGAF-SREKLHHNKN 124

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H+  +  G+      ++++DFFK+RR
Sbjct: 125 INHNLGVTAGVMADECSKLLKDFFKQRR 152


>gi|164686927|ref|ZP_02210955.1| hypothetical protein CLOBAR_00529 [Clostridium bartlettii DSM
           16795]
 gi|164604030|gb|EDQ97495.1| hypothetical protein CLOBAR_00529 [Clostridium bartlettii DSM
           16795]
          Length = 150

 Score =  195 bits (498), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 56/144 (38%), Positives = 77/144 (53%)

Query: 6   VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
            FM+ A+ EA+ A  + E P+GAV V +++II R  N    L+D TAHAE+LAI+     
Sbjct: 5   FFMNEAINEAKKAYDKGETPIGAVIVKDSEIIGRGHNLTETLRDSTAHAEMLAIKDASET 64

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           L    L + DLYVT+EPC MC+ AI  +RI+ +  G  + K   IE    F         
Sbjct: 65  LGGWRLTDCDLYVTMEPCIMCSGAIVNSRIKNIIIGTKHIKNANIEKQHTFKMEYFKDSR 124

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
             +  GI E     I+Q FFK+ R
Sbjct: 125 VNVEFGIMEDECSIILQRFFKDLR 148


>gi|145219369|ref|YP_001130078.1| tRNA-adenosine deaminase [Prosthecochloris vibrioformis DSM 265]
 gi|145205533|gb|ABP36576.1| tRNA-adenosine deaminase [Chlorobium phaeovibrioides DSM 265]
          Length = 153

 Score =  195 bits (498), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 54/150 (36%), Positives = 79/150 (52%), Gaps = 1/150 (0%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNK-IISRAGNRNRELKDVTAHAEILAI 59
           M   +  M  A  EA  A    E+PVGAV +     ++ +  N+   L D TAHAE++A+
Sbjct: 1   MMDFSYCMELAFREALKAFESREVPVGAVVLDGGGHVVGKGYNQVEALCDATAHAEMIAL 60

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
                 L  + L +  L VT+EPC MCA AI  A++ R+ +GA + K G   +       
Sbjct: 61  TSAMATLGTKYLQDCTLAVTMEPCPMCAGAIVNAKVGRVVFGAYDAKMGASGSVLNVTGC 120

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
              +H PE++ GI E R + ++QDFFKE R
Sbjct: 121 RPLNHQPEVFGGIMEGRCQGLLQDFFKELR 150


>gi|225352824|ref|ZP_03743847.1| hypothetical protein BIFPSEUDO_04457 [Bifidobacterium
           pseudocatenulatum DSM 20438]
 gi|225156335|gb|EEG69904.1| hypothetical protein BIFPSEUDO_04457 [Bifidobacterium
           pseudocatenulatum DSM 20438]
          Length = 149

 Score =  195 bits (498), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 48/143 (33%), Positives = 67/143 (46%), Gaps = 1/143 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNK-IISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  A+E A+ AA   E+PVGAV +     +I    N      D  AHAE+ A+    R L
Sbjct: 7   MELAIELAREAAAEGEVPVGAVVLDAGGAVIGSGRNLREAHADPLAHAEVKAMTQAARSL 66

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  L VTLEPC MCA A     + R+ +GA + K G   +           H P
Sbjct: 67  GTWNLADCTLIVTLEPCPMCAGACLQTHVGRIVFGAWDAKLGACGSIWDIPRDPHVGHVP 126

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+  G+ E    +++ DFF  +R
Sbjct: 127 EVIGGVRESECARLMTDFFAGKR 149


>gi|319953292|ref|YP_004164559.1| cmp/dcmp deaminase zinc-binding protein [Cellulophaga algicola DSM
           14237]
 gi|319421952|gb|ADV49061.1| CMP/dCMP deaminase zinc-binding protein [Cellulophaga algicola DSM
           14237]
          Length = 149

 Score =  195 bits (498), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 54/147 (36%), Positives = 82/147 (55%), Gaps = 6/147 (4%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
               +M  AL+EA  A  + E+PVGA+ V+ ++II+RA N   +L DVTAHAE+ AI   
Sbjct: 6   DDTYYMKKALQEAAMAFEKGEVPVGAIIVIQDRIIARAHNLTEQLNDVTAHAEMQAITAA 65

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
              L  + L +  LYVTLEPC MCA A+  ++I ++ Y A + + G    GT      T 
Sbjct: 66  ANFLGGKYLKDCTLYVTLEPCQMCAGALYWSQISKIVYAAKDVERGCGAMGT------TL 119

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           H   +I  G+    +  +++ FF ++R
Sbjct: 120 HPKTKIVGGVLAAEASAMLKRFFSQKR 146


>gi|255693703|ref|ZP_05417378.1| cytidine/deoxycytidylate deaminase family protein [Bacteroides
           finegoldii DSM 17565]
 gi|260620520|gb|EEX43391.1| cytidine/deoxycytidylate deaminase family protein [Bacteroides
           finegoldii DSM 17565]
          Length = 145

 Score =  195 bits (498), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 60/149 (40%), Positives = 81/149 (54%), Gaps = 5/149 (3%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M     FM  AL EA  AA R E+PVGAV V   +II+RA N    L DVTAHAE+ AI 
Sbjct: 1   MLDDTYFMKQALIEAGKAAERGEVPVGAVVVCKERIIARAHNLTETLNDVTAHAEMQAIT 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
               +L  + L E  LYVT+EPC MCA AI+ A+  +L +GA + K G      Q Y ++
Sbjct: 61  AAANVLGGKYLNECTLYVTVEPCVMCAGAIAWAQTGKLVFGAEDEKRG-----YQKYAVS 115

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             H    +  G+       ++++FF  +R
Sbjct: 116 ALHPKTVVVKGLLADECAALMKNFFAAKR 144


>gi|257789865|ref|YP_003180471.1| CMP/dCMP deaminase zinc-binding [Eggerthella lenta DSM 2243]
 gi|317489321|ref|ZP_07947835.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Eggerthella sp. 1_3_56FAA]
 gi|325829718|ref|ZP_08163181.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Eggerthella sp. HGA1]
 gi|257473762|gb|ACV54082.1| CMP/dCMP deaminase zinc-binding [Eggerthella lenta DSM 2243]
 gi|316911566|gb|EFV33161.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Eggerthella sp. 1_3_56FAA]
 gi|325488213|gb|EGC90645.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Eggerthella sp. HGA1]
          Length = 167

 Score =  195 bits (498), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 48/159 (30%), Positives = 75/159 (47%), Gaps = 12/159 (7%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVL----NN--------KIISRAGNRNRELKDV 50
               +M  A+EEA+ A   +E+P+GAV V               ++I+RA N     +D 
Sbjct: 2   TDEDYMRMAIEEARRAEELDEVPIGAVVVYEPIDPGTRRPLAEPQVIARACNLRETTQDP 61

Query: 51  TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI 110
             HAE +A++     L    L    +YVTLEPC MCA  +  AR+ R  YGA++PK G +
Sbjct: 62  AGHAEFIALKQAAERLGVWRLTGCTVYVTLEPCVMCAGLMHQARVDRCVYGAADPKAGAL 121

Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
                       +H+ E   G+      ++++ FF  +R
Sbjct: 122 GTLYAVNADERLNHTFEAVSGVLGDECAELLRSFFARKR 160


>gi|329961864|ref|ZP_08299878.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Bacteroides fluxus YIT 12057]
 gi|328531304|gb|EGF58148.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Bacteroides fluxus YIT 12057]
          Length = 144

 Score =  195 bits (498), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 58/147 (39%), Positives = 79/147 (53%), Gaps = 5/147 (3%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
             + +M  AL EAQ A  R E+PVGAV V  ++II+RA N    L DVTAHAE+ AI   
Sbjct: 2   DDSYYMKQALLEAQKAGERGEVPVGAVVVCKDRIIARAHNLTETLTDVTAHAEMQAITAA 61

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
              L  + L E  LYVT+EPC MCA AI+ A+  +L +GA + K G      Q Y     
Sbjct: 62  ASTLGGKYLNECALYVTVEPCVMCAGAIAWAQTGKLVFGAEDEKRG-----YQRYAPQAL 116

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           H    +  G+       ++++FF  +R
Sbjct: 117 HPKTMVVKGVLADECAALMKNFFAAKR 143


>gi|294625308|ref|ZP_06703945.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 11122]
 gi|294665062|ref|ZP_06730368.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 10535]
 gi|292600377|gb|EFF44477.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 11122]
 gi|292605180|gb|EFF48525.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 10535]
          Length = 169

 Score =  195 bits (498), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 51/148 (34%), Positives = 76/148 (51%), Gaps = 2/148 (1%)

Query: 4   GNVFMSCALEEAQNA-ALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRM 61
              +M  AL+ A+ A    +EIPVGAV V     ++    N N    D +AHAEI+A+R 
Sbjct: 15  DVHWMQHALQLAERAERDYDEIPVGAVLVDAQGNVLGEGWNFNIASHDPSAHAEIVAMRE 74

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
             R L+   L    LYVTLEPC MCA A+  ARI R+ + AS+PK G   +         
Sbjct: 75  AGRRLANHRLIGCTLYVTLEPCAMCAMAMIHARIARVVFAASDPKTGACGSVFDLLADPR 134

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H  ++  G+    +   + ++F+ +R
Sbjct: 135 HNHRVQVSGGVLAAEASLRLTNYFRAKR 162


>gi|206603205|gb|EDZ39685.1| Putative zinc-binding cytidine/deoxycytidylate deaminase
           [Leptospirillum sp. Group II '5-way CG']
          Length = 162

 Score =  195 bits (498), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 48/147 (32%), Positives = 74/147 (50%), Gaps = 1/147 (0%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMG 62
              +M+ AL EA+ A  +NEIP+GA+ V  N  ++ R  N+     D TAHAEI+A+R  
Sbjct: 12  DERWMTEALSEAKTAMKKNEIPIGALLVDGNGTVLGRGHNQRIGSMDPTAHAEIVALRSS 71

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
              +    LP   LYVT+EPC MC  A+  AR+  + +G   P+ G   +          
Sbjct: 72  GLHVKNYRLPGTTLYVTVEPCLMCFGALLEARVETVVFGIREPRWGVTGSLYDLQNDPRF 131

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
            H   +  G+     + +++ FF+ RR
Sbjct: 132 PHRIRVREGVLSHACQDLLRSFFQSRR 158


>gi|24374802|ref|NP_718845.1| cytidine/deoxycytidylate deaminase family protein [Shewanella
           oneidensis MR-1]
 gi|24349479|gb|AAN56289.1|AE015766_5 cytidine/deoxycytidylate deaminase family protein [Shewanella
           oneidensis MR-1]
          Length = 194

 Score =  195 bits (497), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 51/148 (34%), Positives = 71/148 (47%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           K    +M  A+  A+ A    E+PVGAV V +   I+   N +    D  AHAEIL +R 
Sbjct: 32  KVDEHWMRVAMAMAEKAEAEGEVPVGAVLVKDGLQIATGYNLSISQHDPCAHAEILCLRA 91

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
             + +    L +  LYVTLEPC MCA A+  +RI R+ +GA + K G             
Sbjct: 92  AGQTVENYRLLDATLYVTLEPCAMCAGAMVHSRIARVVFGARDEKTGAAGTVLNLLQHPA 151

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H  E+  G+  Q     +  FFK RR
Sbjct: 152 FNHQVEVTSGVLAQDCADQLSRFFKRRR 179


>gi|319941641|ref|ZP_08015965.1| cytosine deaminase [Sutterella wadsworthensis 3_1_45B]
 gi|319804871|gb|EFW01725.1| cytosine deaminase [Sutterella wadsworthensis 3_1_45B]
          Length = 328

 Score =  195 bits (497), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 63/148 (42%), Positives = 86/148 (58%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           +    FM  ALEEAQ A +  EIPVGAV V + K+I+R GN      D TAHAEI+A+R 
Sbjct: 161 EADRSFMRMALEEAQEAGMAGEIPVGAVVVADGKVIARGGNETLRSGDPTAHAEIVALRA 220

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
               L+   L    LYVTLEPC MCA AI+ AR RR+ YGA + + G +E   + + +  
Sbjct: 221 AAAALANHRLTNTTLYVTLEPCPMCAGAIAEARCRRIVYGAGDSRRGALEGAFRLFDIPG 280

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H P +  G+      +++ DFF +RR
Sbjct: 281 VNHRPLVTGGVLALEGEKLLTDFFAKRR 308


>gi|325928669|ref|ZP_08189845.1| tRNA-adenosine deaminase [Xanthomonas perforans 91-118]
 gi|325540965|gb|EGD12531.1| tRNA-adenosine deaminase [Xanthomonas perforans 91-118]
          Length = 171

 Score =  195 bits (497), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 50/148 (33%), Positives = 76/148 (51%), Gaps = 2/148 (1%)

Query: 4   GNVFMSCALEEAQNA-ALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRM 61
              +M  AL+ A+ A    +EIPVGA+ V     ++    N N    D +AHAEI+A+R 
Sbjct: 17  DEHWMRHALQLAERAERDYDEIPVGALLVDAQGNVLGEGWNFNIASHDPSAHAEIVAMRE 76

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
             R L+   L    LYVTLEPC MCA A+  ARI R+ + AS+PK G   +         
Sbjct: 77  AGRRLANHRLIGCTLYVTLEPCAMCAMAMIHARIARVVFAASDPKTGACGSVFDLLADPR 136

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H  ++  G+    +   + ++F+ +R
Sbjct: 137 HNHRVQVCGGVLAAEASLRLTNYFRAKR 164


>gi|291279752|ref|YP_003496587.1| CMP/dCMP deaminase zinc-binding protein [Deferribacter
           desulfuricans SSM1]
 gi|290754454|dbj|BAI80831.1| CMP/dCMP deaminase, zinc-binding protein [Deferribacter
           desulfuricans SSM1]
          Length = 151

 Score =  195 bits (497), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 50/146 (34%), Positives = 80/146 (54%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
              FM  A+ EA  +    E+PVGAV V ++++IS   N   + K+   HAE++AI    
Sbjct: 6   DKYFMKLAIAEAYKSFEEGEVPVGAVVVRDDEVISYGRNIKGKNKNALLHAEMVAIHKSV 65

Query: 64  RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123
           ++L    L E  LYVT EPC MCA AI   RI+++ +GA  PK GG+ +  + +     +
Sbjct: 66  KMLDDWRLNECTLYVTCEPCVMCAGAILHCRIKKVIFGAFEPKFGGVVSNLRVFDTPFFN 125

Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149
           H      G+  +   +++++FFK+ R
Sbjct: 126 HKVRYEFGLFSEEISKMMKNFFKQFR 151


>gi|253572102|ref|ZP_04849506.1| cytosine deaminase [Bacteroides sp. 1_1_6]
 gi|298383486|ref|ZP_06993047.1| cytidine/deoxycytidylate deaminase family protein [Bacteroides sp.
           1_1_14]
 gi|251838282|gb|EES66369.1| cytosine deaminase [Bacteroides sp. 1_1_6]
 gi|298263090|gb|EFI05953.1| cytidine/deoxycytidylate deaminase family protein [Bacteroides sp.
           1_1_14]
          Length = 146

 Score =  195 bits (497), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 61/147 (41%), Positives = 78/147 (53%), Gaps = 5/147 (3%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
               FM  AL EA  AA R E+PVGAV V   +II+RA N    L DVTAHAE+ AI   
Sbjct: 4   DDTYFMKQALIEAGKAAERGEVPVGAVVVCKERIIARAHNLTETLNDVTAHAEMQAITAA 63

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
             +L  + L E  LYVT+EPC MCA AI+ A+  +L +GA + K G      Q Y     
Sbjct: 64  ANVLGGKYLNECTLYVTVEPCVMCAGAIAWAQTGKLVFGAEDDKRG-----YQRYAAQAL 118

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           H    +  GI       +++DFF  +R
Sbjct: 119 HPKTVVVKGILADECATLMKDFFASKR 145


>gi|182437330|ref|YP_001825049.1| putative deaminase [Streptomyces griseus subsp. griseus NBRC 13350]
 gi|326777951|ref|ZP_08237216.1| CMP/dCMP deaminase zinc-binding [Streptomyces cf. griseus
           XylebKG-1]
 gi|178465846|dbj|BAG20366.1| putative deaminase [Streptomyces griseus subsp. griseus NBRC 13350]
 gi|326658284|gb|EGE43130.1| CMP/dCMP deaminase zinc-binding [Streptomyces cf. griseus
           XylebKG-1]
          Length = 142

 Score =  195 bits (497), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 52/140 (37%), Positives = 72/140 (51%), Gaps = 1/140 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  AL EA  AA   ++PVGAV +  +   ++ A N      D TAHAEILA+R      
Sbjct: 1   MRRALAEAGRAASAGDVPVGAVVLGPDGTGLATAHNEREATGDPTAHAEILALRRAAEAH 60

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
            +  L    L VTLEPCTMCA A+  +RI R+ YGA + K G   +          +H P
Sbjct: 61  GEWRLTGCTLVVTLEPCTMCAGALVQSRIARVVYGARDEKAGAAGSLWDVVRDRRLNHRP 120

Query: 127 EIYPGISEQRSRQIIQDFFK 146
           E+  G+ E+   + +  FF+
Sbjct: 121 EVIAGVLERECAEQLTAFFR 140


>gi|46203751|ref|ZP_00051027.2| COG0590: Cytosine/adenosine deaminases [Magnetospirillum
           magnetotacticum MS-1]
          Length = 152

 Score =  195 bits (497), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 72/128 (56%), Positives = 88/128 (68%)

Query: 22  NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81
            E+PVGAV V +  ++  AGNR R L D TAHAEILAIR  C  L  E L   DLYVTLE
Sbjct: 19  GEVPVGAVVVRDGVVLGVAGNRPRALSDPTAHAEILAIRAACTALQDERLTGCDLYVTLE 78

Query: 82  PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141
           PC MCA AIS ARIRRLYY AS+PKGGG+E+G + +   TCHH+PE+Y G     +  ++
Sbjct: 79  PCPMCAGAISFARIRRLYYAASDPKGGGVEHGPRVFNQPTCHHAPEVYSGFRAGEAAGLL 138

Query: 142 QDFFKERR 149
           ++FF  RR
Sbjct: 139 REFFAGRR 146


>gi|15893208|ref|NP_360922.1| cytosine deaminase [Rickettsia conorii str. Malish 7]
 gi|15620423|gb|AAL03823.1| cytosine deaminase [Rickettsia conorii str. Malish 7]
          Length = 168

 Score =  195 bits (497), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 66/148 (44%), Positives = 97/148 (65%), Gaps = 2/148 (1%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVL--NNKIISRAGNRNRELKDVTAHAEILAIRM 61
            N FM  AL++A+ A  +NE+PVGAV V   + KII+   N   E  +   HAEI+AI  
Sbjct: 12  NNFFMEQALKQAKIAFDKNEVPVGAVVVDRLHQKIIASTHNNTEEKNNALYHAEIIAINE 71

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
            C ++S + L + D+YVTLEPC MCAAAI+ +R++RL+YGAS+ K G +E+  +++  + 
Sbjct: 72  ACNLISSKNLNDYDIYVTLEPCAMCAAAIAHSRLKRLFYGASDSKHGVVESNLRYFNSSA 131

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
           C H PEIY GI  + S  ++++FFK  R
Sbjct: 132 CFHRPEIYSGILAEDSGLLMKEFFKRIR 159


>gi|282891324|ref|ZP_06299826.1| hypothetical protein pah_c050o112 [Parachlamydia acanthamoebae str.
           Hall's coccus]
 gi|281498821|gb|EFB41138.1| hypothetical protein pah_c050o112 [Parachlamydia acanthamoebae str.
           Hall's coccus]
          Length = 176

 Score =  195 bits (497), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 53/148 (35%), Positives = 79/148 (53%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
            +   FM  AL++A  A    E+PVGA+ V   KII+R  N+   L+D TAHAE+L I  
Sbjct: 12  DEDEKFMLEALKQAWKAFQAKEVPVGAILVHEGKIIARGYNQVELLRDATAHAEVLCITA 71

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
           G   LS   L +  LY T+EPC MCA A+ L+R+  L +GA + + G   +      +  
Sbjct: 72  GEAALSNWRLSQCKLYCTIEPCAMCAGAMLLSRVEELIWGAPDIRHGANGSWVNLLNIPH 131

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
             H  ++  GI +     +++ FF+ RR
Sbjct: 132 PTHQIKVKSGILKDPCALLMKQFFQIRR 159


>gi|153808687|ref|ZP_01961355.1| hypothetical protein BACCAC_02986 [Bacteroides caccae ATCC 43185]
 gi|149128513|gb|EDM19731.1| hypothetical protein BACCAC_02986 [Bacteroides caccae ATCC 43185]
          Length = 145

 Score =  195 bits (497), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 61/149 (40%), Positives = 79/149 (53%), Gaps = 5/149 (3%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M     FM  AL EA  AA R E+PVGAV V   +II+RA N    L DVTAHAE+ AI 
Sbjct: 1   MLDDTYFMKQALIEAGKAAERGEVPVGAVVVCKERIIARAHNLTETLNDVTAHAEMQAIT 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
               +L  + L E  LYVT+EPC MCA AI+ A+  +L +GA + K G      Q Y   
Sbjct: 61  AAANVLGGKYLSECTLYVTVEPCVMCAGAIAWAQTGKLVFGAEDEKRG-----YQRYAAD 115

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             H    +  GI       ++++FF  +R
Sbjct: 116 ALHPKTVVVKGILADECAALMREFFAAKR 144


>gi|313826960|gb|EFS64674.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Propionibacterium acnes HL063PA1]
          Length = 149

 Score =  195 bits (497), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 55/143 (38%), Positives = 80/143 (55%), Gaps = 1/143 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M+ AL+ A+ AA R ++P+GAV +  N +++S AGN      D TAHAE+LAIR      
Sbjct: 1   MTQALDVARRAATRGDVPIGAVILGANGEVLSEAGNERERTGDPTAHAEVLAIRRAAEAR 60

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  L VTLEPCTMCA  I  ARI R+ +GA +PK G + +           H P
Sbjct: 61  DGWRLGDCTLVVTLEPCTMCAGTIVAARIPRVVFGAFDPKAGAVSSLFDAMRDPRLPHRP 120

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           ++  G+  + S  ++++FF   R
Sbjct: 121 KVVTGVMAEESSALLREFFDGHR 143


>gi|319403672|emb|CBI77257.1| Cytosine/adenosine deaminase [Bartonella rochalimae ATCC BAA-1498]
          Length = 150

 Score =  195 bits (497), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 76/142 (53%), Positives = 97/142 (68%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  AL EAQ+A  ++EIPVGAV      II+RAGN  +   D T HAE+  IR+ C+I  
Sbjct: 6   MEIALLEAQSAKKQDEIPVGAVITHGQTIIARAGNYIKNPHDPTGHAEMRVIRIACQIFK 65

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
            E +PE D+YVTLEPC MCAAAIS ARIR LYY  S+ KGG IE+G +FY   TCHH P 
Sbjct: 66  SERIPECDIYVTLEPCAMCAAAISFARIRNLYYATSDSKGGAIEHGPRFYQQPTCHHRPN 125

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
           +Y G  E+ + Q+++DFF ++R
Sbjct: 126 VYSGFKEKEASQLLKDFFIQKR 147


>gi|29347644|ref|NP_811147.1| putative cytosine/adenosine deaminase [Bacteroides thetaiotaomicron
           VPI-5482]
 gi|29339545|gb|AAO77341.1| putative cytosine/adenosine deaminase [Bacteroides thetaiotaomicron
           VPI-5482]
          Length = 147

 Score =  195 bits (497), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 61/147 (41%), Positives = 78/147 (53%), Gaps = 5/147 (3%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
               FM  AL EA  AA R E+PVGAV V   +II+RA N    L DVTAHAE+ AI   
Sbjct: 5   DDTYFMKQALIEAGKAAERGEVPVGAVVVCKERIIARAHNLTETLNDVTAHAEMQAITAA 64

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
             +L  + L E  LYVT+EPC MCA AI+ A+  +L +GA + K G      Q Y     
Sbjct: 65  ANVLGGKYLNECTLYVTVEPCVMCAGAIAWAQTGKLVFGAEDDKRG-----YQRYAAQAL 119

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           H    +  GI       +++DFF  +R
Sbjct: 120 HPKTVVVKGILADECATLMKDFFASKR 146


>gi|307565958|ref|ZP_07628417.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Prevotella amnii CRIS 21A-A]
 gi|307345386|gb|EFN90764.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Prevotella amnii CRIS 21A-A]
          Length = 156

 Score =  195 bits (496), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 59/149 (39%), Positives = 83/149 (55%), Gaps = 5/149 (3%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +KK   +M  ALEEA+ A    EIP+GA+ V  ++II+RA N    L DVTAHAE+ AI 
Sbjct: 13  IKKDLYYMQFALEEAKQAYKEKEIPIGAIIVCKDRIIARAHNLTERLHDVTAHAEMQAIT 72

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
           +    L  + L    LYVT+EPC MCA A+  ++++R+ +G  + K G        Y   
Sbjct: 73  IAANELGGKYLEGCTLYVTVEPCIMCAGALGWSQMKRIVFGCIDDKRG-----YHTYAPK 127

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             H    I  GI E   ++++  FFKERR
Sbjct: 128 ALHPKANIIGGIMENECKELMLRFFKERR 156


>gi|297623312|ref|YP_003704746.1| tRNA(Ile)-lysidine synthetase [Truepera radiovictrix DSM 17093]
 gi|297164492|gb|ADI14203.1| tRNA(Ile)-lysidine synthetase [Truepera radiovictrix DSM 17093]
          Length = 556

 Score =  195 bits (496), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 51/148 (34%), Positives = 73/148 (49%), Gaps = 1/148 (0%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
            +   +M  AL EA+ AA R E+PVGAV V    ++ R  N  RE  D +AHAE+ AIR 
Sbjct: 401 DEDARWMRLALNEARRAAERGELPVGAVVVRGGAVLGRGHNTTRESGDPSAHAELHAIRQ 460

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
               L    L    L+VTLEPC MC  A+  A + R+ YGA+N + G +           
Sbjct: 461 AAAALGDWRLAGCTLFVTLEPCPMCFGALLSAHLPRVVYGATNAREGALGGVADLQQHPW 520

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
              +  +  G+    +  ++  FF+ RR
Sbjct: 521 -KRTVAVRGGVLAAEAGALLTAFFRARR 547


>gi|270159636|ref|ZP_06188292.1| tRNA-specific adenosine deaminase [Legionella longbeachae D-4968]
 gi|289165578|ref|YP_003455716.1| tRNA-specific adenosine deaminase [Legionella longbeachae NSW150]
 gi|269987975|gb|EEZ94230.1| tRNA-specific adenosine deaminase [Legionella longbeachae D-4968]
 gi|288858751|emb|CBJ12656.1| tRNA-specific adenosine deaminase [Legionella longbeachae NSW150]
          Length = 149

 Score =  195 bits (496), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 50/148 (33%), Positives = 74/148 (50%), Gaps = 1/148 (0%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRM 61
               +M  A E+A  A    E+PVGA+ V N N+++    N  ++  D ++HAEI AIR 
Sbjct: 2   NDQYWMRQAYEQALLAQTEGEVPVGAILVSNENQLLGAGRNLIQKSHDPSSHAEIQAIRQ 61

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
             + L    L +  LYVTLEPC MCA  +  ARI RL +   + K G   +         
Sbjct: 62  ASQRLQNHRLLDTTLYVTLEPCAMCAGLMVHARISRLVFATRDFKSGAAGSVYNLLQGYP 121

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H  +I  GI + +   ++ +FFK  R
Sbjct: 122 LNHKVQIDEGIMQAQCASLLSEFFKACR 149


>gi|91215472|ref|ZP_01252443.1| putative cytosine/adenosine deaminase [Psychroflexus torquis ATCC
           700755]
 gi|91186424|gb|EAS72796.1| putative cytosine/adenosine deaminase [Psychroflexus torquis ATCC
           700755]
          Length = 149

 Score =  195 bits (496), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 57/147 (38%), Positives = 84/147 (57%), Gaps = 6/147 (4%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
             + FM  AL+EAQ A  + EIPVGAV   NN+II+++ N   +L DVTAHAE+ AI   
Sbjct: 6   DDHYFMKKALQEAQQAFDKGEIPVGAVVTHNNQIIAKSHNLTEQLTDVTAHAEMQAITAA 65

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
              +  + L    LYVTLEPC MCA A+  +++ RL + A +   G    GTQ       
Sbjct: 66  ANHIGGKYLRGCTLYVTLEPCQMCAGALYWSQLSRLVFAAPDEGRGYRTLGTQL------ 119

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           H   ++  GI E+ + ++++ FF ++R
Sbjct: 120 HPKTKVDHGILEEEASRLLKAFFIQKR 146


>gi|332973009|gb|EGK10948.1| cytidine/deoxycytidylate deaminase [Psychrobacter sp. 1501(2011)]
          Length = 207

 Score =  195 bits (496), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 58/143 (40%), Positives = 77/143 (53%), Gaps = 1/143 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  ALE AQ  A + E+PVGAV V    II    N+     D TAHAEI+A+R  C  L 
Sbjct: 57  MQAALELAQQGASKEEVPVGAVLVQEGNIIGEGFNQPILTCDPTAHAEIVALRSACSALE 116

Query: 68  QEILP-EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
              LP    LYVTLEPCTMC  A+  AR+ RL +    P+ G + +      +   +H  
Sbjct: 117 NYRLPANTTLYVTLEPCTMCLGALIHARLSRLVFATQEPRAGMVGSQLNLVEMDFYNHKI 176

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
            +  G+ +  S+QI++ FFK RR
Sbjct: 177 AVNYGLLQADSQQILKSFFKARR 199


>gi|309812017|ref|ZP_07705783.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Dermacoccus sp. Ellin185]
 gi|308434075|gb|EFP57941.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Dermacoccus sp. Ellin185]
          Length = 159

 Score =  195 bits (496), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 48/146 (32%), Positives = 68/146 (46%), Gaps = 1/146 (0%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
           + +M  ALE A+      ++PVGA+ V  + ++I    N      D T HAEI+A+R   
Sbjct: 14  DAWMGRALELAREVGAAGDVPVGALVVDPDGEVIGVGANLREVDGDPTGHAEIVAMRRAA 73

Query: 64  RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123
                  L    L VTLEPC MCA A   AR+ R+  GA + K G           +   
Sbjct: 74  ASRGGWRLDGCTLVVTLEPCLMCAGAAVQARLPRIVLGAWDRKAGACGGLWDVVRDSRST 133

Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149
           H  E+  GI E     ++++FF  RR
Sbjct: 134 HRIEVVGGIREDECSAVLKEFFATRR 159


>gi|124516363|gb|EAY57871.1| putative zinc-binding cytidine/deoxycytidylate deaminase
           [Leptospirillum rubarum]
          Length = 164

 Score =  195 bits (496), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 49/147 (33%), Positives = 73/147 (49%), Gaps = 1/147 (0%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMG 62
              +M+ AL EA+ A  +NEIP+GA+ V  N  ++ R  N+     D TAHAEI+A+R  
Sbjct: 12  DERWMTEALSEAKTAMEKNEIPIGAILVDANGTVLGRGHNQRVGSTDPTAHAEIVALRTS 71

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
              +    LP   LYVT+EPC MC  A+  AR+  + +G   P+ G   +          
Sbjct: 72  GLHVKNYRLPGTTLYVTVEPCLMCFGALLEARVETVVFGIREPRWGVTGSLYDLQNDPRF 131

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
            H   +  G+       ++Q FF+ RR
Sbjct: 132 PHRIRVREGVLSHACLDLLQSFFQSRR 158


>gi|119386848|ref|YP_917903.1| CMP/dCMP deaminase, zinc-binding [Paracoccus denitrificans PD1222]
 gi|119377443|gb|ABL72207.1| CMP/dCMP deaminase, zinc-binding protein [Paracoccus denitrificans
           PD1222]
          Length = 149

 Score =  195 bits (496), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 81/143 (56%), Positives = 103/143 (72%), Gaps = 1/143 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  AL+EA+ AA R E+PVGAV V  +  +++RAGNR RE++D TAHAEILAIR  C  L
Sbjct: 7   MPTALDEARAAARRGEVPVGAVLVGADGAVLARAGNRTREMRDPTAHAEILAIRAACAHL 66

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
             E LP   L+VTLEPC MCAAAIS ARI  LYYGA +P+ GG+ +G + +    CHH P
Sbjct: 67  GSERLPGARLWVTLEPCPMCAAAISAARIEMLYYGAEDPRMGGVRHGARVFDHPQCHHRP 126

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           EI  GIS + SR+++Q+FF+ERR
Sbjct: 127 EIIDGISAEESRRLLQEFFRERR 149


>gi|220926362|ref|YP_002501664.1| CMP/dCMP deaminase [Methylobacterium nodulans ORS 2060]
 gi|219950969|gb|ACL61361.1| CMP/dCMP deaminase zinc-binding [Methylobacterium nodulans ORS
           2060]
          Length = 158

 Score =  195 bits (496), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 71/128 (55%), Positives = 94/128 (73%)

Query: 22  NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81
            E+PVGAV +    +++ AGNR R L+D TAHAEILAIR  C+ +  E L   DLYVTLE
Sbjct: 30  GEVPVGAVVMRGGTVLAVAGNRPRALRDPTAHAEILAIRAACQAIGDERLAGCDLYVTLE 89

Query: 82  PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141
           PC MCA AIS ARIRRLY+ A++PKGG +ENG + ++  TCHH+PE+Y G+ E  +  ++
Sbjct: 90  PCAMCAGAISFARIRRLYFAAADPKGGAVENGPRLFSQPTCHHAPEVYGGLREAEAAALL 149

Query: 142 QDFFKERR 149
           +DFF+ERR
Sbjct: 150 RDFFRERR 157


>gi|75908361|ref|YP_322657.1| tRNA-adenosine deaminase [Anabaena variabilis ATCC 29413]
 gi|75702086|gb|ABA21762.1| tRNA-adenosine deaminase [Anabaena variabilis ATCC 29413]
          Length = 147

 Score =  195 bits (496), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 63/143 (44%), Positives = 79/143 (55%), Gaps = 1/143 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           MS ALE A+ A    EIPVGAV    +  +I+   NR    +D TAHAEI+A+R   RIL
Sbjct: 1   MSHALELAKVAGDAGEIPVGAVITDASGNLIAEGENRKERDQDPTAHAEIVALRAATRIL 60

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L E  LYVTLEPC MCA AI  AR+ +L YG  + K G I         A  +H  
Sbjct: 61  QTWRLHECTLYVTLEPCPMCAGAIIQARLGKLVYGVDDTKTGAIRTVLNIPDSAASNHRL 120

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           ++  GI E   RQ +Q++F  RR
Sbjct: 121 QVIGGILESACRQHLQNWFINRR 143


>gi|188583522|ref|YP_001926967.1| CMP/dCMP deaminase zinc-binding [Methylobacterium populi BJ001]
 gi|179347020|gb|ACB82432.1| CMP/dCMP deaminase zinc-binding [Methylobacterium populi BJ001]
          Length = 147

 Score =  195 bits (496), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 72/128 (56%), Positives = 90/128 (70%)

Query: 22  NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81
            E+PVGAV V +  +++ A NR R L D TAHAEILAIR  C  L  E L   DLYVTLE
Sbjct: 19  GEVPVGAVVVRDGAVLAVASNRPRALSDPTAHAEILAIRAACAALRDERLTGCDLYVTLE 78

Query: 82  PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141
           PC MCA AI+ ARIRRLYY AS+PKGGG+E+G + +   TCHH+PE+Y G  E  +  ++
Sbjct: 79  PCPMCAGAIAFARIRRLYYAASDPKGGGVEHGPRVFNQPTCHHAPEVYSGFREGEAAGLL 138

Query: 142 QDFFKERR 149
           +DFF +RR
Sbjct: 139 RDFFSQRR 146


>gi|312113039|ref|YP_004010635.1| CMP/dCMP deaminase zinc-binding protein [Rhodomicrobium vannielii
           ATCC 17100]
 gi|311218168|gb|ADP69536.1| CMP/dCMP deaminase zinc-binding protein [Rhodomicrobium vannielii
           ATCC 17100]
          Length = 157

 Score =  194 bits (495), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 77/143 (53%), Positives = 97/143 (67%), Gaps = 1/143 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  AL EA+ AA   E PVGAV V  +  I  R  N    ++D   HAE+ AIR  C  +
Sbjct: 1   MQEALIEAERAAALGETPVGAVVVAPDGSIAGRGHNLVISVRDPFGHAEMRAIRQACEAV 60

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
             E LP  DLYVTLEPCTMCAAAIS ARIRRLY+GA + KGG +ENG +F++ ATCHH+P
Sbjct: 61  QSERLPGYDLYVTLEPCTMCAAAISFARIRRLYFGAWDEKGGAVENGVRFFSAATCHHAP 120

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           EIY GI++  +  +++ FF+ERR
Sbjct: 121 EIYGGIAQAEAAALLRAFFQERR 143


>gi|302185724|ref|ZP_07262397.1| cytidine/deoxycytidylate deaminase, zinc-binding region
           [Pseudomonas syringae pv. syringae 642]
          Length = 169

 Score =  194 bits (495), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 60/148 (40%), Positives = 82/148 (55%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
            K   FM  AL  A   AL  E+PVGAV V N +II R  N      D +AHAE++AIR 
Sbjct: 10  SKDQYFMREALALAAQGALLGEVPVGAVVVQNGEIIGRGYNCPISGSDPSAHAEMVAIRQ 69

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
             + L    LP   LYVTLEPC+MCA  I  +R+ R+ YGA  PK G +++  QF++ A 
Sbjct: 70  AAKALDNYRLPGSTLYVTLEPCSMCAGLIVHSRVARVVYGALEPKAGIVQSQGQFFSQAF 129

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H      G+  +    ++ +FF+ RR
Sbjct: 130 LNHRVLFEGGVLGEECGTMLSEFFRMRR 157


>gi|313206574|ref|YP_004045751.1| cmp/dcmp deaminase zinc-binding protein [Riemerella anatipestifer
           DSM 15868]
 gi|312445890|gb|ADQ82245.1| CMP/dCMP deaminase zinc-binding protein [Riemerella anatipestifer
           DSM 15868]
 gi|315023430|gb|EFT36438.1| tRNA-specific adenosine-34 deaminase [Riemerella anatipestifer
           RA-YM]
 gi|325335978|gb|ADZ12252.1| Cytosine/adenosine deaminase [Riemerella anatipestifer RA-GD]
          Length = 143

 Score =  194 bits (495), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 55/149 (36%), Positives = 80/149 (53%), Gaps = 6/149 (4%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M     FM  A +EA  A  ++E+PVG V V N ++I+R  N    L DVTAHAE+ +I 
Sbjct: 1   MFTDEYFMRMAFQEALIAFEKDEVPVGCVIVHNERVIARGYNLTETLNDVTAHAEMQSIT 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
                L  + L +  +YVTLEPCTMCA A+  ++I R+  GA +   G ++         
Sbjct: 61  SAANALGGKYLKDCTMYVTLEPCTMCAGALFWSQISRVVIGARDEHRGFLKQNIN----- 115

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             H   +I  GI E   R ++++FFK +R
Sbjct: 116 -LHPKTQISIGIMEDDCRNLVKEFFKSKR 143


>gi|289426038|ref|ZP_06427785.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Propionibacterium acnes SK187]
 gi|289427970|ref|ZP_06429674.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Propionibacterium acnes J165]
 gi|295131701|ref|YP_003582364.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Propionibacterium acnes SK137]
 gi|289153581|gb|EFD02295.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Propionibacterium acnes SK187]
 gi|289158853|gb|EFD07053.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Propionibacterium acnes J165]
 gi|291375889|gb|ADD99743.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Propionibacterium acnes SK137]
          Length = 160

 Score =  194 bits (495), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 54/143 (37%), Positives = 79/143 (55%), Gaps = 1/143 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M+ AL+ A+ AA   ++P+GAV +  N +++S AGN      D TAHAE+LAIR      
Sbjct: 12  MTQALDVARRAATWGDVPIGAVILGANGEVLSEAGNERERTGDPTAHAEVLAIRRAAEAR 71

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  L VTLEPCTMCA  I  ARI R+ +GA +PK G + +           H P
Sbjct: 72  DGWRLGDCTLVVTLEPCTMCAGTIVAARIPRVVFGAFDPKAGAVSSLFDAMRDPRLPHRP 131

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           ++  G+  + S  ++++FF   R
Sbjct: 132 KVVTGVMAEESSALLREFFDGHR 154


>gi|89257159|ref|YP_514521.1| zinc-binding domain-containing protein [Francisella tularensis
           subsp. holarctica LVS]
 gi|115315498|ref|YP_764221.1| cytosine/adenosine deaminase [Francisella tularensis subsp.
           holarctica OSU18]
 gi|134302708|ref|YP_001122676.1| cytidine and deoxycytidylate deaminase zinc-binding
           domain-containing protein [Francisella tularensis subsp.
           tularensis WY96-3418]
 gi|156503384|ref|YP_001429449.1| cytidine/deoxycytidylate deaminase zinc-binding domain-containing
           protein [Francisella tularensis subsp. holarctica
           FTNF002-00]
 gi|187932249|ref|YP_001892234.1| zinc-binding protein [Francisella tularensis subsp. mediasiatica
           FSC147]
 gi|290953357|ref|ZP_06557978.1| zinc-binding protein [Francisella tularensis subsp. holarctica
           URFT1]
 gi|295313404|ref|ZP_06804011.1| zinc-binding protein [Francisella tularensis subsp. holarctica
           URFT1]
 gi|89144990|emb|CAJ80350.1| Zinc-binding domain protein [Francisella tularensis subsp.
           holarctica LVS]
 gi|115130397|gb|ABI83584.1| probable cytosine/adenosine deaminase [Francisella tularensis
           subsp. holarctica OSU18]
 gi|134050485|gb|ABO47556.1| Cytidine and deoxycytidylate deaminase Zinc-binding domain protein
           [Francisella tularensis subsp. tularensis WY96-3418]
 gi|156253987|gb|ABU62493.1| cytidine/deoxycytidylate deaminase, zinc-binding domain protein
           [Francisella tularensis subsp. holarctica FTNF002-00]
 gi|187713158|gb|ACD31455.1| zinc-binding protein [Francisella tularensis subsp. mediasiatica
           FSC147]
          Length = 153

 Score =  194 bits (495), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 49/148 (33%), Positives = 76/148 (51%), Gaps = 1/148 (0%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
            +   FM  A ++A  A    E+P+GAV V +++II +  N+   L D TAHAEIL +R 
Sbjct: 6   DQDIFFMQKAYQQALLAYQAGEVPIGAVLVRDDQIIVQNFNQTIGLNDPTAHAEILVLRS 65

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
               L    L    LYVTLEPC MC   +  AR+  L Y   + + G   +  + +    
Sbjct: 66  AALKLGNYRLVNTKLYVTLEPCIMCLGGLIQARVPELVYACDDSRVGAF-SREKLHHNKN 124

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H+  +  G+      ++++DFFK+RR
Sbjct: 125 INHNLGVTAGVMADECGKLLKDFFKQRR 152


>gi|282854964|ref|ZP_06264298.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Propionibacterium acnes J139]
 gi|282582110|gb|EFB87493.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Propionibacterium acnes J139]
 gi|314922049|gb|EFS85880.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Propionibacterium acnes HL001PA1]
 gi|314965899|gb|EFT09998.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Propionibacterium acnes HL082PA2]
 gi|314980659|gb|EFT24753.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Propionibacterium acnes HL110PA3]
 gi|315090999|gb|EFT62975.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Propionibacterium acnes HL110PA4]
 gi|315095126|gb|EFT67102.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Propionibacterium acnes HL060PA1]
 gi|315105358|gb|EFT77334.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Propionibacterium acnes HL050PA2]
 gi|327328755|gb|EGE70515.1| tRNA-specific adenosine deaminase [Propionibacterium acnes
           HL103PA1]
          Length = 156

 Score =  194 bits (495), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 52/143 (36%), Positives = 78/143 (54%), Gaps = 1/143 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M+ AL+ A+ AA   ++P+GAV +  + +++S AGN      D TAHAE+LAIR      
Sbjct: 8   MTQALDVARRAATWGDVPIGAVILGADGEVLSEAGNERERTGDPTAHAEVLAIRRAAEAR 67

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  L VTLEPCTMCA  I  ARI R+ +GA + K G + +           H P
Sbjct: 68  DGWRLGDCTLVVTLEPCTMCAGTIVAARIPRVVFGAFDSKAGAVSSLFDVMRDPRLPHRP 127

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           ++  G+  + S  ++++FF   R
Sbjct: 128 KVVTGVMAEESSALLREFFDGHR 150


>gi|260061052|ref|YP_003194132.1| putative cytosine/adenosine deaminase [Robiginitalea biformata
           HTCC2501]
 gi|88785184|gb|EAR16353.1| putative cytosine/adenosine deaminase [Robiginitalea biformata
           HTCC2501]
          Length = 149

 Score =  194 bits (495), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 58/147 (39%), Positives = 82/147 (55%), Gaps = 6/147 (4%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
               FM  AL+EA+ A    E+PVGAV  + +++I+RA N   +L DVTAHAE+ AI   
Sbjct: 6   DDAFFMRKALQEAEAAFDLGEVPVGAVITVRDRVIARAHNLTEKLNDVTAHAEMQAITAA 65

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
              L  + L +  LYVTLEPC MCA A+  +++ R+ YGA +P+ G    G         
Sbjct: 66  ANFLGGKYLTDCTLYVTLEPCQMCAGALYWSQVSRVVYGAPDPQRGFTAMG------GKL 119

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           H    + PGI E  +  +++ FF ERR
Sbjct: 120 HPRTLVTPGILEAEAAALLKRFFIERR 146


>gi|160885114|ref|ZP_02066117.1| hypothetical protein BACOVA_03112 [Bacteroides ovatus ATCC 8483]
 gi|237718265|ref|ZP_04548746.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
 gi|260174220|ref|ZP_05760632.1| putative cytosine/adenosine deaminase [Bacteroides sp. D2]
 gi|293368778|ref|ZP_06615382.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Bacteroides ovatus SD CMC 3f]
 gi|299147814|ref|ZP_07040877.1| cytidine/deoxycytidylate deaminase family protein [Bacteroides sp.
           3_1_23]
 gi|315922489|ref|ZP_07918729.1| conserved hypothetical protein [Bacteroides sp. D2]
 gi|156109464|gb|EDO11209.1| hypothetical protein BACOVA_03112 [Bacteroides ovatus ATCC 8483]
 gi|229452449|gb|EEO58240.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
 gi|292636083|gb|EFF54571.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Bacteroides ovatus SD CMC 3f]
 gi|298513997|gb|EFI37883.1| cytidine/deoxycytidylate deaminase family protein [Bacteroides sp.
           3_1_23]
 gi|313696364|gb|EFS33199.1| conserved hypothetical protein [Bacteroides sp. D2]
          Length = 145

 Score =  194 bits (495), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 60/149 (40%), Positives = 80/149 (53%), Gaps = 5/149 (3%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M     FM  AL EA  AA R E+PVGAV V   +II+RA N    L DVTAHAE+ AI 
Sbjct: 1   MLDDIYFMKQALIEAGKAAERGEVPVGAVVVCKERIIARAHNLTETLNDVTAHAEMQAIT 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
               +L  + L E  LYVT+EPC MCA AI+ A+  +L +GA + K G      Q Y  +
Sbjct: 61  AAANVLGGKYLNECTLYVTVEPCVMCAGAIAWAQTGKLVFGAEDEKRG-----YQKYAGS 115

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             H    +  G+       ++++FF  +R
Sbjct: 116 ALHPKTVVVKGVMADECATLMKEFFAAKR 144


>gi|291287100|ref|YP_003503916.1| CMP/dCMP deaminase zinc-binding protein [Denitrovibrio acetiphilus
           DSM 12809]
 gi|290884260|gb|ADD67960.1| CMP/dCMP deaminase zinc-binding protein [Denitrovibrio acetiphilus
           DSM 12809]
          Length = 158

 Score =  194 bits (495), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 54/148 (36%), Positives = 80/148 (54%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           ++   FM+ A++EA+ AA + E+P+GAV V    +I R  N+    K    HAEI+AI  
Sbjct: 6   EQDIFFMNEAVKEAEGAAAKGEVPIGAVVVSEGAVIGRGSNKKNSGKSALNHAEIIAIED 65

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
               +    L E  LYVTLEPC MCA AI  ARIR + +G + PK GG+ +  + + +  
Sbjct: 66  ASSKIGDWRLDECTLYVTLEPCLMCAGAIIHARIRNVIFGTTEPKFGGVISLARTFDIDG 125

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H      G+       +++ FFKE R
Sbjct: 126 LNHKVSYKGGLHSDEISAMMKQFFKEVR 153


>gi|325981113|ref|YP_004293515.1| CMP/dCMP deaminase zinc-binding protein [Nitrosomonas sp. AL212]
 gi|325530632|gb|ADZ25353.1| CMP/dCMP deaminase zinc-binding protein [Nitrosomonas sp. AL212]
          Length = 152

 Score =  194 bits (495), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 55/142 (38%), Positives = 75/142 (52%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  ALE A  A    E+PVGAV V +  I+ R  NR     D +AHAEI+A+R     ++
Sbjct: 1   MQAALELALQAQECGEVPVGAVVVQHGVIVGRGYNRPISTADPSAHAEIMAMRDAGGHMA 60

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
              L +  LYVTLEPC MC  AI  ARI+RL Y A++PK G   +          +H   
Sbjct: 61  NYRLLDCVLYVTLEPCVMCIGAIFHARIQRLVYAAADPKTGACGSVLDLPAETRLNHHLL 120

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
           +  GI    +  +++ FF +RR
Sbjct: 121 VDAGIMAPEAGTLLRQFFAQRR 142


>gi|78047755|ref|YP_363930.1| putative cytidine / deoxycytidylate deaminase family protein
           [Xanthomonas campestris pv. vesicatoria str. 85-10]
 gi|78036185|emb|CAJ23876.1| putative cytidine / deoxycytidylate deaminase family protein
           [Xanthomonas campestris pv. vesicatoria str. 85-10]
          Length = 169

 Score =  194 bits (495), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 50/148 (33%), Positives = 76/148 (51%), Gaps = 2/148 (1%)

Query: 4   GNVFMSCALEEAQNA-ALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRM 61
              +M  AL+ A+ A    +EIPVGA+ V     ++    N N    D +AHAEI+A+R 
Sbjct: 15  DEHWMRHALQLAERAERDYDEIPVGALLVDAQGNVLGEGWNFNIASHDPSAHAEIVAMRE 74

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
             R L+   L    LYVTLEPC MCA A+  ARI R+ + AS+PK G   +         
Sbjct: 75  AGRRLANHRLIGCTLYVTLEPCAMCAMAMIHARIARVVFAASDPKTGACGSVFDLLADPR 134

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H  ++  G+    +   + ++F+ +R
Sbjct: 135 HNHRVQVCGGVLAAEASLRLTNYFRAKR 162


>gi|212716206|ref|ZP_03324334.1| hypothetical protein BIFCAT_01122 [Bifidobacterium catenulatum DSM
           16992]
 gi|212660866|gb|EEB21441.1| hypothetical protein BIFCAT_01122 [Bifidobacterium catenulatum DSM
           16992]
          Length = 149

 Score =  194 bits (495), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 49/143 (34%), Positives = 68/143 (47%), Gaps = 1/143 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNK-IISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  A+E A+ AA   E+PVGAV +     +I R  N      D  AHAE+ A+    R L
Sbjct: 7   MGLAIELAREAAAEGEVPVGAVVLDAGGAVIGRGRNLREAHADPLAHAEVKAMTQAARSL 66

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  L VTLEPC MCA A     + R+ +GA + K G   +           H P
Sbjct: 67  GTWNLADCTLIVTLEPCPMCAGACLQTHVGRIVFGAWDAKLGACGSIWDIPRDPHVGHVP 126

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+  G+ E    +++ DFF  +R
Sbjct: 127 EVVGGVCEMECARLMTDFFAGKR 149


>gi|240140677|ref|YP_002965157.1| tRNA-specific adenosine deaminase [Methylobacterium extorquens AM1]
 gi|240010654|gb|ACS41880.1| tRNA-specific adenosine deaminase [Methylobacterium extorquens AM1]
          Length = 147

 Score =  194 bits (494), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 72/128 (56%), Positives = 90/128 (70%)

Query: 22  NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81
            E+PVGA  V +  +++ AGNR R L D TAHAEILAIR  C  L  E L   DLYVTLE
Sbjct: 19  GEVPVGAAVVRDGTVLAVAGNRPRTLCDPTAHAEILAIRAACAALRDERLTGCDLYVTLE 78

Query: 82  PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141
           PC MCA AI+ ARIRRLYY AS+PKGGG+E+G + +   TCHH+PE+Y G  E  +  ++
Sbjct: 79  PCPMCAGAIAFARIRRLYYAASDPKGGGVEHGPRVFNQPTCHHAPEVYSGFRESEAAGLL 138

Query: 142 QDFFKERR 149
           ++FF ERR
Sbjct: 139 REFFAERR 146


>gi|146299285|ref|YP_001193876.1| CMP/dCMP deaminase, zinc-binding [Flavobacterium johnsoniae UW101]
 gi|146153703|gb|ABQ04557.1| CMP/dCMP deaminase, zinc-binding [Flavobacterium johnsoniae UW101]
          Length = 147

 Score =  194 bits (494), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 55/147 (37%), Positives = 83/147 (56%), Gaps = 6/147 (4%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
               FM  AL+EA+ A  + EIPVGA+ V+ +K+I+R+ N    L DVTAHAE+ +I   
Sbjct: 6   TDEYFMKKALQEAEIAYEKGEIPVGAIIVVADKVIARSHNLTELLNDVTAHAEMQSITAA 65

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
              L  + L +  LYVTLEPC MCA A+  ++I ++ +GA + + G I  GT+       
Sbjct: 66  ANFLGGKYLKDCTLYVTLEPCQMCAGALYWSQISKIVFGARDEQRGFINMGTKL------ 119

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           H    +  G+    +  +++ FF ERR
Sbjct: 120 HPKTTVVSGVMANEAADLMKRFFLERR 146


>gi|169335874|ref|ZP_02863067.1| hypothetical protein ANASTE_02307 [Anaerofustis stercorihominis DSM
           17244]
 gi|169258612|gb|EDS72578.1| hypothetical protein ANASTE_02307 [Anaerofustis stercorihominis DSM
           17244]
          Length = 145

 Score =  194 bits (494), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 60/145 (41%), Positives = 83/145 (57%), Gaps = 3/145 (2%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           N +M  A++EA  +    ++PVGA+ V ++KIIS+A N   +  D TAHAEILAIR  C 
Sbjct: 2   NTYMLLAVQEALKSGK--DVPVGALIVKDDKIISKAHNEVIKNNDPTAHAEILAIREACS 59

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
           IL    L    +YVTLEPC MCA AI  A+I ++ YGA +   G   +            
Sbjct: 60  ILDSYNLSGCSIYVTLEPCPMCAGAIINAKIDKVVYGAMDMDYGACGSKYNLLEDNRA-K 118

Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149
           S E+Y GI E +   I++DFF++ R
Sbjct: 119 SIEVYAGIEEDKCSVILKDFFEQIR 143


>gi|304315578|ref|YP_003850723.1| CMP/dCMP deaminase zinc-binding [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
 gi|302777080|gb|ADL67639.1| CMP/dCMP deaminase zinc-binding [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
          Length = 143

 Score =  194 bits (494), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 56/142 (39%), Positives = 76/142 (53%), Gaps = 5/142 (3%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M CA++EA  +    E+PVGAV V +  II +  N     KD T HAEI AI+  C+ + 
Sbjct: 1   MKCAIDEAVLSLKLGEMPVGAVVVKDGIIIGKGHNLKETEKDATQHAEINAIKDACKNIG 60

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
              L +  LYVTLEPC MCA AI  +RI+R+Y GA +   G       F      +   +
Sbjct: 61  DWRLNDASLYVTLEPCPMCAGAIIESRIKRVYIGAESHDSGAAGTVYDF-----LNKKVD 115

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
           +Y GI E   +++I DFF   R
Sbjct: 116 VYFGIMEDDCKKLISDFFSRLR 137


>gi|46446282|ref|YP_007647.1| hypothetical protein pc0648 [Candidatus Protochlamydia amoebophila
           UWE25]
 gi|46399923|emb|CAF23372.1| conserved hypothetical protein [Candidatus Protochlamydia
           amoebophila UWE25]
          Length = 166

 Score =  194 bits (494), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 57/148 (38%), Positives = 81/148 (54%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
                FM  AL+EA  A   +E+PVGAV V +  II+R  N+   LKD TAHAE+L +  
Sbjct: 11  NDDERFMLEALKEAWKAFKADEVPVGAVLVKDKHIIARGFNQVEMLKDATAHAEMLCLTA 70

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
           G   L    L E  LY T+EPC+MCA A+ L RI+ L +GA + + G   +    +    
Sbjct: 71  GESALDNWRLSETTLYCTVEPCSMCAGAMFLTRIKTLVWGAPDLRHGANGSWVNLFDEIH 130

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
             H+ EI   + +    QI++DFF+ +R
Sbjct: 131 PTHAIEIRKHVLQNPCAQILKDFFQLQR 158


>gi|86356480|ref|YP_468372.1| cytosine deaminase protein [Rhizobium etli CFN 42]
 gi|86280582|gb|ABC89645.1| cytosine deaminase protein [Rhizobium etli CFN 42]
          Length = 143

 Score =  194 bits (494), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 84/140 (60%), Positives = 106/140 (75%)

Query: 10  CALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQE 69
            ALEEA+ A  R E+P+GAV V++   +SR+GNR RE  DVTAHAEI AIR+ C  L QE
Sbjct: 1   MALEEARAAGERGEVPIGAVVVIDGIAVSRSGNRTRERNDVTAHAEIAAIRLACEALGQE 60

Query: 70  ILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIY 129
            L   DLYVTLEPCTMC+AAIS ARIRRLYYGA +PKGG ++NG +FY   TCHH+PE+Y
Sbjct: 61  RLAGADLYVTLEPCTMCSAAISFARIRRLYYGAEDPKGGAVDNGVRFYAQPTCHHAPEVY 120

Query: 130 PGISEQRSRQIIQDFFKERR 149
            G +E +S +I++ FF ++R
Sbjct: 121 SGFNEVQSAEILRTFFSQKR 140


>gi|330968078|gb|EGH68338.1| cytidine/deoxycytidylate deaminase, zinc-binding region
           [Pseudomonas syringae pv. actinidiae str. M302091]
          Length = 169

 Score =  194 bits (494), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 60/148 (40%), Positives = 81/148 (54%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
                FM  AL  A   ALR E+PVGAV V N +II R  N      D +AHAE++AIR 
Sbjct: 10  SNDQHFMREALALAAQGALRGEVPVGAVVVQNGEIIGRGYNCPISGSDPSAHAEMVAIRD 69

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
             R L    LP   LYVTLEPC+MCA  I  +R+ R+ YGA  PK G +++  QF++   
Sbjct: 70  AARALDNYRLPGSTLYVTLEPCSMCAGLIVHSRVARVVYGALEPKAGIVQSQGQFFSQGF 129

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H      G+  +    ++ +FF+ RR
Sbjct: 130 LNHRVLFEGGVLGEECGAMLSEFFRMRR 157


>gi|71275637|ref|ZP_00651922.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [Xylella
           fastidiosa Dixon]
 gi|71897819|ref|ZP_00680045.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [Xylella
           fastidiosa Ann-1]
 gi|71163528|gb|EAO13245.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [Xylella
           fastidiosa Dixon]
 gi|71732374|gb|EAO34428.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [Xylella
           fastidiosa Ann-1]
          Length = 203

 Score =  194 bits (494), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 52/149 (34%), Positives = 76/149 (51%), Gaps = 2/149 (1%)

Query: 3   KGNVFMSCALEEAQNAALR-NEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIR 60
           +   +M  AL  A  AA   +EIPVGAV +     ++    N N    D +AHAEI+A+R
Sbjct: 48  EHTHWMRHALTLAHRAATEFDEIPVGAVLISPEGTLLGEGCNYNITSHDPSAHAEIMALR 107

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
                L    +P   LYVTLEPC MCA AI  ARI  L Y A++PK G   +        
Sbjct: 108 AAGHQLRNHRMPGCTLYVTLEPCLMCAMAIIHARIAHLIYAAADPKTGACGSTFDILNDP 167

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H   +Y G+  + + + + ++F+ +R
Sbjct: 168 RHNHHVHVYGGLLAEEASRRLTNYFRTKR 196


>gi|241667466|ref|ZP_04755044.1| zinc-binding protein [Francisella philomiragia subsp. philomiragia
           ATCC 25015]
 gi|254876013|ref|ZP_05248723.1| zinc-binding domain-containing protein [Francisella philomiragia
           subsp. philomiragia ATCC 25015]
 gi|254842034|gb|EET20448.1| zinc-binding domain-containing protein [Francisella philomiragia
           subsp. philomiragia ATCC 25015]
          Length = 153

 Score =  194 bits (494), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 51/148 (34%), Positives = 79/148 (53%), Gaps = 1/148 (0%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           +    FM  A E+A  A    E+P+GAV V +N+I+ +  N+   L D TAHAEIL +R 
Sbjct: 6   QDDIFFMQKAYEQALLAYKAGEVPIGAVLVKDNQIVVQDFNKTIMLNDPTAHAEILVLRQ 65

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
             + L    L    LYVTLEPC MC   +  AR+  L Y   + + G I +  + +    
Sbjct: 66  AAKELENYRLVNTKLYVTLEPCIMCLGGLIQARVSELIYACDDTRVG-IFSREKLHRNKN 124

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H+ ++  G+  +   ++++DFFK RR
Sbjct: 125 INHNLKVTSGVMTEECSKLLRDFFKLRR 152


>gi|325273807|ref|ZP_08139995.1| CMP/dCMP deaminase zinc-binding protein [Pseudomonas sp. TJI-51]
 gi|324101066|gb|EGB98724.1| CMP/dCMP deaminase zinc-binding protein [Pseudomonas sp. TJI-51]
          Length = 159

 Score =  194 bits (494), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 58/148 (39%), Positives = 82/148 (55%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
            +   +M  AL  A   A   E+PVGAV V + ++I +  NR     D +AHAE++AIR 
Sbjct: 9   SRDQEYMRLALSLAAEGAALGEVPVGAVLVQHGQVIGQGFNRPIIDSDPSAHAEMVAIRA 68

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
             +  S   LP   LYVTLEPC+MCA  I  +R+ R+ +GA  PK G +++  QF+    
Sbjct: 69  AAKAASNYRLPGSTLYVTLEPCSMCAGLIVHSRVMRVVFGALEPKAGIVQSQGQFFGQGF 128

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H   +  G+  Q   QI+ DFFK RR
Sbjct: 129 LNHRVMVEGGVLAQECGQILSDFFKARR 156


>gi|319779703|ref|YP_004130616.1| tRNA-specific adenosine-34 deaminase [Taylorella equigenitalis
           MCE9]
 gi|317109727|gb|ADU92473.1| tRNA-specific adenosine-34 deaminase [Taylorella equigenitalis
           MCE9]
          Length = 162

 Score =  194 bits (494), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 51/151 (33%), Positives = 78/151 (51%), Gaps = 3/151 (1%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNK-IISRAGNRNRELKDVTAHAEILAI 59
           +     FM  AL+ A+ A    E+PVGAV V  N+ I+ +  N+     D TAHAEI+A+
Sbjct: 5   IADNKKFMQLALQNAEKAYKSGEVPVGAVLVGPNQDILGQGYNQVIGTSDSTAHAEIVAL 64

Query: 60  RMGCRILSQEILP-EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
           R     +    LP    ++VTLEPC MC  A+  AR+  L  G+ +PK G        + 
Sbjct: 65  REANLSIQNYRLPSGCTMFVTLEPCIMCLGALIHARLEHLVIGSRDPKTGACGGRLSIHA 124

Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +  +H      G+  +   +I++DFF+E+R
Sbjct: 125 -SDLNHHMHTTVGVLSEECSKILKDFFREKR 154


>gi|50843619|ref|YP_056846.1| putative cytidine and deoxycytidylate deaminase [Propionibacterium
           acnes KPA171202]
 gi|50841221|gb|AAT83888.1| putative cytidine and deoxycytidylate deaminase [Propionibacterium
           acnes KPA171202]
 gi|313765224|gb|EFS36588.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Propionibacterium acnes HL013PA1]
 gi|313771619|gb|EFS37585.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Propionibacterium acnes HL074PA1]
 gi|313794199|gb|EFS42219.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Propionibacterium acnes HL110PA1]
 gi|313803320|gb|EFS44516.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Propionibacterium acnes HL110PA2]
 gi|313808654|gb|EFS47114.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Propionibacterium acnes HL087PA2]
 gi|313810633|gb|EFS48347.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Propionibacterium acnes HL083PA1]
 gi|313817055|gb|EFS54769.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Propionibacterium acnes HL059PA1]
 gi|313819106|gb|EFS56820.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Propionibacterium acnes HL046PA2]
 gi|313821181|gb|EFS58895.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Propionibacterium acnes HL036PA1]
 gi|313823858|gb|EFS61572.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Propionibacterium acnes HL036PA2]
 gi|313829225|gb|EFS66939.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Propionibacterium acnes HL063PA2]
 gi|313831470|gb|EFS69184.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Propionibacterium acnes HL007PA1]
 gi|313834120|gb|EFS71834.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Propionibacterium acnes HL056PA1]
 gi|313839149|gb|EFS76863.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Propionibacterium acnes HL086PA1]
 gi|314916774|gb|EFS80605.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Propionibacterium acnes HL005PA4]
 gi|314919085|gb|EFS82916.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Propionibacterium acnes HL050PA1]
 gi|314921113|gb|EFS84944.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Propionibacterium acnes HL050PA3]
 gi|314926198|gb|EFS90029.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Propionibacterium acnes HL036PA3]
 gi|314931378|gb|EFS95209.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Propionibacterium acnes HL067PA1]
 gi|314956234|gb|EFT00606.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Propionibacterium acnes HL027PA1]
 gi|314958729|gb|EFT02831.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Propionibacterium acnes HL002PA1]
 gi|314961035|gb|EFT05136.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Propionibacterium acnes HL002PA2]
 gi|314963855|gb|EFT07955.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Propionibacterium acnes HL082PA1]
 gi|314968860|gb|EFT12958.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Propionibacterium acnes HL037PA1]
 gi|314974836|gb|EFT18931.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Propionibacterium acnes HL053PA1]
 gi|314977837|gb|EFT21931.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Propionibacterium acnes HL045PA1]
 gi|314979008|gb|EFT23102.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Propionibacterium acnes HL072PA2]
 gi|314984517|gb|EFT28609.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Propionibacterium acnes HL005PA1]
 gi|314985912|gb|EFT30004.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Propionibacterium acnes HL005PA2]
 gi|314989321|gb|EFT33412.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Propionibacterium acnes HL005PA3]
 gi|315078338|gb|EFT50377.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Propionibacterium acnes HL053PA2]
 gi|315081352|gb|EFT53328.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Propionibacterium acnes HL078PA1]
 gi|315085008|gb|EFT56984.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Propionibacterium acnes HL027PA2]
 gi|315087538|gb|EFT59514.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Propionibacterium acnes HL002PA3]
 gi|315089555|gb|EFT61531.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Propionibacterium acnes HL072PA1]
 gi|315095685|gb|EFT67661.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Propionibacterium acnes HL038PA1]
 gi|315099989|gb|EFT71965.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Propionibacterium acnes HL059PA2]
 gi|315102851|gb|EFT74827.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Propionibacterium acnes HL046PA1]
 gi|315106621|gb|EFT78597.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Propionibacterium acnes HL030PA1]
 gi|315110552|gb|EFT82528.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Propionibacterium acnes HL030PA2]
 gi|327325845|gb|EGE67636.1| tRNA-specific adenosine deaminase [Propionibacterium acnes
           HL096PA3]
 gi|327332941|gb|EGE74673.1| tRNA-specific adenosine deaminase [Propionibacterium acnes
           HL096PA2]
 gi|327448646|gb|EGE95300.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Propionibacterium acnes HL043PA1]
 gi|327450305|gb|EGE96959.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Propionibacterium acnes HL013PA2]
 gi|327451128|gb|EGE97782.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Propionibacterium acnes HL043PA2]
 gi|327455462|gb|EGF02117.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Propionibacterium acnes HL087PA3]
 gi|327455948|gb|EGF02603.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Propionibacterium acnes HL092PA1]
 gi|327457603|gb|EGF04258.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Propionibacterium acnes HL083PA2]
 gi|328756878|gb|EGF70494.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Propionibacterium acnes HL087PA1]
 gi|328757762|gb|EGF71378.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Propionibacterium acnes HL020PA1]
 gi|328759467|gb|EGF73083.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Propionibacterium acnes HL025PA2]
 gi|328761913|gb|EGF75422.1| tRNA-specific adenosine deaminase [Propionibacterium acnes
           HL099PA1]
 gi|332676565|gb|AEE73381.1| tRNA-specific adenosine deaminase [Propionibacterium acnes 266]
          Length = 149

 Score =  194 bits (494), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 54/143 (37%), Positives = 79/143 (55%), Gaps = 1/143 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M+ AL+ A+ AA   ++P+GAV +  N +++S AGN      D TAHAE+LAIR      
Sbjct: 1   MTQALDVARRAATWGDVPIGAVILGANGEVLSEAGNERERTGDPTAHAEVLAIRRAAEAR 60

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  L VTLEPCTMCA  I  ARI R+ +GA +PK G + +           H P
Sbjct: 61  DGWRLGDCTLVVTLEPCTMCAGTIVAARIPRVVFGAFDPKAGAVSSLFDAMRDPRLPHRP 120

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           ++  G+  + S  ++++FF   R
Sbjct: 121 KVVTGVMAEESSALLREFFDGHR 143


>gi|150009165|ref|YP_001303908.1| putative cytosine/adenosine deaminase [Parabacteroides distasonis
           ATCC 8503]
 gi|255015772|ref|ZP_05287898.1| putative cytosine/adenosine deaminase [Bacteroides sp. 2_1_7]
 gi|256841721|ref|ZP_05547227.1| cytosine/adenosine deaminase [Parabacteroides sp. D13]
 gi|298377094|ref|ZP_06987048.1| cytidine/deoxycytidylate deaminase family protein [Bacteroides sp.
           3_1_19]
 gi|149937589|gb|ABR44286.1| putative cytosine/adenosine deaminase [Parabacteroides distasonis
           ATCC 8503]
 gi|256736615|gb|EEU49943.1| cytosine/adenosine deaminase [Parabacteroides sp. D13]
 gi|298266078|gb|EFI07737.1| cytidine/deoxycytidylate deaminase family protein [Bacteroides sp.
           3_1_19]
          Length = 146

 Score =  194 bits (494), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 65/147 (44%), Positives = 83/147 (56%), Gaps = 5/147 (3%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
               FM  AL EA+ AA   E+PVGAV V NN+II+RA N+   L DVTAHAE+LAI   
Sbjct: 5   NDEYFMKQALVEARAAASEGEVPVGAVIVCNNQIIARAHNQTECLNDVTAHAEMLAITAA 64

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
             +L  + L    LYVT+EPC MCA AI  A++  + YGAS+ K G        +     
Sbjct: 65  AGVLGAKYLTNCSLYVTVEPCIMCAGAIGWAQLSTIVYGASDDKRG-----FSKFAPQAF 119

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           H    I  GI E+   + +Q FFK+RR
Sbjct: 120 HPKAIIKKGILEKECAEEMQRFFKQRR 146


>gi|213019012|ref|ZP_03334819.1| cytidine and deoxycytidylate deaminase family protein [Wolbachia
           endosymbiont of Culex quinquefasciatus JHB]
 gi|212995121|gb|EEB55762.1| cytidine and deoxycytidylate deaminase family protein [Wolbachia
           endosymbiont of Culex quinquefasciatus JHB]
          Length = 135

 Score =  193 bits (493), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 71/142 (50%), Positives = 94/142 (66%), Gaps = 8/142 (5%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M+ A+E+A+ A    E+P+GAV V  N IIS A N      D TAHAE+L IR      S
Sbjct: 1   MALAIEQAKLAQKDGEVPIGAVIVNGNNIISSAHN---ISNDPTAHAEMLTIRQA---FS 54

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
              L E ++YVTLEPC MCA AIS A+I+RLY+GA NPKGGG+ENGT+ +    C+H PE
Sbjct: 55  TSTLYEAEMYVTLEPCPMCAQAISFAKIKRLYFGAYNPKGGGVENGTRIFQF--CNHIPE 112

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
           +Y GI E +   +++DFF++ R
Sbjct: 113 VYGGILETKCSLLLKDFFEKLR 134


>gi|313836522|gb|EFS74236.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Propionibacterium acnes HL037PA2]
 gi|314928976|gb|EFS92807.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Propionibacterium acnes HL044PA1]
 gi|314971034|gb|EFT15132.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Propionibacterium acnes HL037PA3]
          Length = 156

 Score =  193 bits (493), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 54/143 (37%), Positives = 78/143 (54%), Gaps = 1/143 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M+ AL+ A+ AA   ++P+GAV +  +  ++S AGN      D TAHAE+LAIR      
Sbjct: 8   MTQALDVARRAAAWGDVPIGAVVLGSDGDVLSEAGNERELTGDPTAHAEVLAIRRAAEAR 67

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  L VTLEPCTMCA AI  ARI R+ +GA +PK G + +           H  
Sbjct: 68  DGWRLGDCTLIVTLEPCTMCAGAIVAARIPRVVFGAFDPKAGAVSSLFDVMRDPRLPHRT 127

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+  G+  + S  ++++FF   R
Sbjct: 128 EVVTGVMVEESSALLREFFDGHR 150


>gi|237714907|ref|ZP_04545388.1| conserved hypothetical protein [Bacteroides sp. D1]
 gi|262406825|ref|ZP_06083374.1| ComE operon protein 2 [Bacteroides sp. 2_1_22]
 gi|298483658|ref|ZP_07001833.1| cytidine/deoxycytidylate deaminase family protein [Bacteroides sp.
           D22]
 gi|229445232|gb|EEO51023.1| conserved hypothetical protein [Bacteroides sp. D1]
 gi|262355528|gb|EEZ04619.1| ComE operon protein 2 [Bacteroides sp. 2_1_22]
 gi|295084706|emb|CBK66229.1| Cytosine/adenosine deaminases [Bacteroides xylanisolvens XB1A]
 gi|298270228|gb|EFI11814.1| cytidine/deoxycytidylate deaminase family protein [Bacteroides sp.
           D22]
          Length = 145

 Score =  193 bits (493), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 61/149 (40%), Positives = 80/149 (53%), Gaps = 5/149 (3%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M     FM  AL EA  AA R E+PVGAV V   +II+RA N    L DVTAHAE+ AI 
Sbjct: 1   MLDDIYFMKQALIEAGKAAERGEVPVGAVVVCKERIIARAHNLTETLNDVTAHAEMQAIT 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
               +L  + L E  LYVT+EPC MCA AI+ A+  +L +GA + K G      Q Y  +
Sbjct: 61  AAANVLGGKYLNECTLYVTVEPCVMCAGAIAWAQTGKLVFGAEDEKRG-----YQKYAGS 115

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             H    +  GI       ++++FF  +R
Sbjct: 116 ALHPKTVVVKGIMADECAALMKEFFAAKR 144


>gi|328906579|gb|EGG26354.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Propionibacterium sp. P08]
          Length = 160

 Score =  193 bits (493), Expect = 5e-48,   Method: Composition-based stats.
 Identities = 54/143 (37%), Positives = 78/143 (54%), Gaps = 1/143 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M+ AL+ A+ AA   ++P+GAV +  +  ++S AGN      D TAHAE+LAIR      
Sbjct: 12  MTQALDVARRAAAWGDVPIGAVVLGSDGDVLSEAGNERELTGDPTAHAEVLAIRRAAEAR 71

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  L VTLEPCTMCA AI  ARI R+ +GA +PK G + +           H  
Sbjct: 72  DGWRLGDCTLIVTLEPCTMCAGAIVAARIPRVVFGAFDPKAGAVSSLFDVMRDPRLPHRT 131

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+  G+  + S  ++++FF   R
Sbjct: 132 EVVTGVMVEESSALLREFFDGHR 154


>gi|326328640|ref|ZP_08194980.1| cytidine and deoxycytidylate deaminase family protein
           [Nocardioidaceae bacterium Broad-1]
 gi|325953601|gb|EGD45601.1| cytidine and deoxycytidylate deaminase family protein
           [Nocardioidaceae bacterium Broad-1]
          Length = 165

 Score =  193 bits (493), Expect = 5e-48,   Method: Composition-based stats.
 Identities = 51/149 (34%), Positives = 76/149 (51%), Gaps = 1/149 (0%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIR 60
            +    M  ALEE + A    ++P+GAV V     +I R  N      D T HAE++A+R
Sbjct: 5   NRWEAPMRAALEEGRAALATGDVPIGAVVVDPSGAVIGRGRNVREAEADPTGHAEVVALR 64

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              +   +  L    L VTLEPCTMCA A  LAR+ R+ +GA + K G + +        
Sbjct: 65  EAAKARGEWRLEGCTLVVTLEPCTMCAGAAVLARVERIVFGAFDDKAGAVGSLWDVVRDR 124

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H PE+  G+  +  R +++DFF  +R
Sbjct: 125 RLNHRPEVVAGLLAEEQRALLEDFFGAQR 153


>gi|56961816|ref|YP_173538.1| cytosine/adenosine deaminase [Bacillus clausii KSM-K16]
 gi|56908050|dbj|BAD62577.1| cytosine/adenosine deaminase [Bacillus clausii KSM-K16]
          Length = 165

 Score =  193 bits (493), Expect = 5e-48,   Method: Composition-based stats.
 Identities = 52/147 (35%), Positives = 72/147 (48%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
               +M+ ALEEA  A    E+P+GAV +   K+I+ A N         AHAE+LAI   
Sbjct: 5   THEKWMNVALEEAAKAEEIGEVPIGAVIIKEGKLIASAYNLREANHSALAHAELLAIEQA 64

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
            + L    L    LYVTLEPC MCA AI  +RI  + YGA + K G              
Sbjct: 65  NKKLGAWRLEGCTLYVTLEPCPMCAGAIVQSRIPTVVYGAQDQKAGCAGTLMNLLQEQRF 124

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H  E+  G+ E+   + +  FF++ R
Sbjct: 125 NHRCEVISGVLEEGCGEKLSAFFRKLR 151


>gi|282856349|ref|ZP_06265628.1| cytidine and deoxycytidylate deaminase family protein
           [Pyramidobacter piscolens W5455]
 gi|282585720|gb|EFB91009.1| cytidine and deoxycytidylate deaminase family protein
           [Pyramidobacter piscolens W5455]
          Length = 166

 Score =  193 bits (493), Expect = 5e-48,   Method: Composition-based stats.
 Identities = 62/150 (41%), Positives = 81/150 (54%), Gaps = 1/150 (0%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAI 59
           +     +M+ ALE    AA   +IPVGA+ V    +II R  NR R   D TAHAE++A+
Sbjct: 2   LTSDQEYMNLALELGLQAAREGDIPVGALVVDPCGEIIGRGRNRRRIEHDPTAHAEVVAL 61

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
           R   R L    L    LYVTLEPC MCA A+  AR+ RL YG ++PK G           
Sbjct: 62  REAARNLGVWNLNGCSLYVTLEPCPMCAGALVQARVSRLVYGCTDPKAGACGTLYDLTRD 121

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
               H  ++ PG+ EQ  R ++QDFF+E R
Sbjct: 122 TRLFHRLQVVPGVMEQECRALLQDFFRECR 151


>gi|71902073|ref|ZP_00684112.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [Xylella
           fastidiosa Ann-1]
 gi|71728165|gb|EAO30357.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [Xylella
           fastidiosa Ann-1]
          Length = 203

 Score =  193 bits (493), Expect = 5e-48,   Method: Composition-based stats.
 Identities = 52/149 (34%), Positives = 76/149 (51%), Gaps = 2/149 (1%)

Query: 3   KGNVFMSCALEEAQNAALR-NEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIR 60
           +   +M  AL  A  AA   +EIPVGAV +     ++    N N    D +AHAEI+A+R
Sbjct: 48  EHTHWMRHALTLAHRAATEFDEIPVGAVLISPEGTLLGEGCNYNITSHDPSAHAEIMALR 107

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
                L    +P   LYVTLEPC MCA AI  ARI  L Y A++PK G   +        
Sbjct: 108 AAGHQLRNHRMPGCTLYVTLEPCLMCAMAIIHARIAHLIYAATDPKTGACGSTFDILNDP 167

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H   +Y G+  + + + + ++F+ +R
Sbjct: 168 RHNHHVHVYGGLLAEEASRRLTNYFRTKR 196


>gi|126697581|ref|YP_001086478.1| putative cytosine/adenosine deaminase [Clostridium difficile 630]
 gi|254973665|ref|ZP_05270137.1| putative cytosine/adenosine deaminase [Clostridium difficile
           QCD-66c26]
 gi|255091056|ref|ZP_05320534.1| putative cytosine/adenosine deaminase [Clostridium difficile CIP
           107932]
 gi|255099172|ref|ZP_05328149.1| putative cytosine/adenosine deaminase [Clostridium difficile
           QCD-63q42]
 gi|255312710|ref|ZP_05354293.1| putative cytosine/adenosine deaminase [Clostridium difficile
           QCD-76w55]
 gi|255515470|ref|ZP_05383146.1| putative cytosine/adenosine deaminase [Clostridium difficile
           QCD-97b34]
 gi|255648562|ref|ZP_05395464.1| putative cytosine/adenosine deaminase [Clostridium difficile
           QCD-37x79]
 gi|255654097|ref|ZP_05399506.1| putative cytosine/adenosine deaminase [Clostridium difficile
           QCD-23m63]
 gi|260681784|ref|YP_003213069.1| putative cytosine/adenosine deaminase [Clostridium difficile CD196]
 gi|260685381|ref|YP_003216514.1| putative cytosine/adenosine deaminase [Clostridium difficile
           R20291]
 gi|296452478|ref|ZP_06894177.1| cytidine/deoxycytidylate deaminase [Clostridium difficile NAP08]
 gi|296878246|ref|ZP_06902256.1| cytidine/deoxycytidylate deaminase [Clostridium difficile NAP07]
 gi|306518691|ref|ZP_07405038.1| putative cytosine/adenosine deaminase [Clostridium difficile
           QCD-32g58]
 gi|115249018|emb|CAJ66829.1| transfer RNA specific adenosine deaminase [Clostridium difficile]
 gi|260207947|emb|CBA60067.1| putative cytosine/adenosine deaminase [Clostridium difficile CD196]
 gi|260211397|emb|CBE01470.1| putative cytosine/adenosine deaminase [Clostridium difficile
           R20291]
 gi|296258684|gb|EFH05580.1| cytidine/deoxycytidylate deaminase [Clostridium difficile NAP08]
 gi|296430754|gb|EFH16591.1| cytidine/deoxycytidylate deaminase [Clostridium difficile NAP07]
          Length = 151

 Score =  193 bits (493), Expect = 5e-48,   Method: Composition-based stats.
 Identities = 58/149 (38%), Positives = 87/149 (58%), Gaps = 1/149 (0%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M+  + +M  AL+EA  A  + E P+GA+ V +N+II+RA N    LKD TAHAEILAI+
Sbjct: 1   MES-SFYMKEALKEAYKAYNKKETPIGAIIVKDNQIIARAHNLTETLKDSTAHAEILAIK 59

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
                L    L + DLYVT+EPC MC+ AI  +RI++L  G  + K   IE   +F    
Sbjct: 60  QASEKLGGWRLTDCDLYVTMEPCIMCSGAIVNSRIKKLIIGTRHVKNSYIEKQHEFKLDY 119

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +++ ++   + ++    I+Q+FFK  R
Sbjct: 120 FNNNNVKVAFDVLQEECSIILQEFFKALR 148


>gi|218532085|ref|YP_002422901.1| CMP/dCMP deaminase zinc-binding [Methylobacterium chloromethanicum
           CM4]
 gi|218524388|gb|ACK84973.1| CMP/dCMP deaminase zinc-binding [Methylobacterium chloromethanicum
           CM4]
          Length = 147

 Score =  193 bits (493), Expect = 5e-48,   Method: Composition-based stats.
 Identities = 74/128 (57%), Positives = 91/128 (71%)

Query: 22  NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81
            E+PVGA  V +  +++ AGNR R L D TAHAEILAIR  C  LS E L   DLYVTLE
Sbjct: 19  GEVPVGAAVVRDGAVLAVAGNRPRTLCDPTAHAEILAIRAACAALSDERLTGCDLYVTLE 78

Query: 82  PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141
           PC MCA AI+ ARIRRLYY AS+PKGGG+E+G + +   TCHH+PE+Y G  E  +  ++
Sbjct: 79  PCPMCAGAIAFARIRRLYYAASDPKGGGVEHGPRVFNQPTCHHAPEVYSGFREGEAAGLL 138

Query: 142 QDFFKERR 149
           +DFF ERR
Sbjct: 139 RDFFAERR 146


>gi|311106622|ref|YP_003979475.1| tRNA-specific adenosine deaminase [Achromobacter xylosoxidans A8]
 gi|310761311|gb|ADP16760.1| tRNA-specific adenosine deaminase [Achromobacter xylosoxidans A8]
          Length = 163

 Score =  193 bits (493), Expect = 5e-48,   Method: Composition-based stats.
 Identities = 51/137 (37%), Positives = 72/137 (52%), Gaps = 1/137 (0%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           +   FM  AL+EAQ A    E+PVGA+ V     I+ R  NR     D TAHAEI+A+R 
Sbjct: 10  QDASFMELALQEAQAAYDIGEVPVGALVVSAQGDILGRGYNRTIIDHDPTAHAEIVALRG 69

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
             R L    LP + +YVTLEPC MC  A+  AR+ R+ +GA +PK G   +     ++  
Sbjct: 70  AARALENYRLPGITVYVTLEPCVMCIGAMLHARLARVVFGAYDPKTGACGSVLDVGSVPK 129

Query: 122 CHHSPEIYPGISEQRSR 138
            +H   +  G+  +   
Sbjct: 130 LNHHTSVTGGVLAEPCG 146


>gi|332879982|ref|ZP_08447666.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Capnocytophaga sp. oral taxon 329 str. F0087]
 gi|332681978|gb|EGJ54891.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Capnocytophaga sp. oral taxon 329 str. F0087]
          Length = 145

 Score =  193 bits (493), Expect = 5e-48,   Method: Composition-based stats.
 Identities = 58/149 (38%), Positives = 86/149 (57%), Gaps = 6/149 (4%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M +   FM  ALEEA+ A   +EIPVGA+  ++N+II+RA N    L DVTAHAE+ AI 
Sbjct: 1   MTEDEYFMQKALEEAEVAFEEDEIPVGAIITIDNRIIARAHNMTERLNDVTAHAEMQAIT 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
           M    L  + L +  +Y+TLEPC MCA A+  +++ RL Y A++   G    G       
Sbjct: 61  MAANYLGGKYLKDCTMYLTLEPCAMCAGALYWSQLSRLVYAAADTHRGYTVMG------G 114

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
           T H   EI  G+    + ++++ FF+++R
Sbjct: 115 TLHPKTEITTGVLAAPATELLKQFFQQKR 143


>gi|255304952|ref|ZP_05349126.1| putative cytosine/adenosine deaminase [Clostridium difficile ATCC
           43255]
          Length = 151

 Score =  193 bits (493), Expect = 5e-48,   Method: Composition-based stats.
 Identities = 57/149 (38%), Positives = 87/149 (58%), Gaps = 1/149 (0%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M+  + +M  AL+EA  A  + E P+GA+ V +N+II+RA N    LKD TAHAEILAI+
Sbjct: 1   MES-SFYMKEALKEAYKAYNKKETPIGAIIVKDNQIIARAHNLTETLKDSTAHAEILAIK 59

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
                L    L + DLYVT+EPC MC+ AI  +RI++L  G  + K   IE   +F    
Sbjct: 60  QASEKLGGWRLTDCDLYVTMEPCIMCSGAIVNSRIKKLIIGTRHVKNSYIEKQHEFKLDY 119

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +++ ++   + ++    ++Q+FFK  R
Sbjct: 120 FNNNNVKVAFDVLQEECSIMLQEFFKALR 148


>gi|241563436|ref|XP_002401703.1| conserved hypothetical protein [Ixodes scapularis]
 gi|215501895|gb|EEC11389.1| conserved hypothetical protein [Ixodes scapularis]
          Length = 159

 Score =  193 bits (493), Expect = 5e-48,   Method: Composition-based stats.
 Identities = 64/148 (43%), Positives = 94/148 (63%), Gaps = 2/148 (1%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVL--NNKIISRAGNRNRELKDVTAHAEILAIRM 61
            N FM  AL++A+ A  +NE+PVGAV V   N KII+   N   E  +   HAEI+AI  
Sbjct: 12  NNFFMEQALKQARIAFDKNEVPVGAVIVDRLNQKIIASTHNNTEEKNNALCHAEIIAINE 71

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
            C ++  + L + D+YVTLE C MCAAAI+ +R++RL+YGA + K G +E+  +++  + 
Sbjct: 72  ACNLIYSKNLNDYDIYVTLESCAMCAAAIAHSRLKRLFYGAFDSKHGAVESNLRYFNSSA 131

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
           C H PEIY GI  + S  ++++FFK  R
Sbjct: 132 CFHRPEIYSGILAEDSGLLMKEFFKRIR 159


>gi|198283023|ref|YP_002219344.1| CMP/dCMP deaminase zinc-binding [Acidithiobacillus ferrooxidans
           ATCC 53993]
 gi|218665839|ref|YP_002425229.1| cytidine and deoxycytidylate deaminase family protein
           [Acidithiobacillus ferrooxidans ATCC 23270]
 gi|198247544|gb|ACH83137.1| CMP/dCMP deaminase zinc-binding [Acidithiobacillus ferrooxidans
           ATCC 53993]
 gi|218518052|gb|ACK78638.1| cytidine and deoxycytidylate deaminase family protein
           [Acidithiobacillus ferrooxidans ATCC 23270]
          Length = 177

 Score =  193 bits (492), Expect = 6e-48,   Method: Composition-based stats.
 Identities = 54/149 (36%), Positives = 77/149 (51%), Gaps = 1/149 (0%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIR 60
            +   +M+ AL+ A  AA + E+PVGAV V     +++ A N      D +AHAE+  +R
Sbjct: 9   SRDAAWMALALDYAARAAGQGEVPVGAVLVDVGGHLLAAAHNTPVRDHDPSAHAEMRVLR 68

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              R L    L    LYVTLEPC MC  A+  AR+ RL YGA +PK G +E+        
Sbjct: 69  QAARSLQNYRLTGTTLYVTLEPCVMCVGALLHARVARLVYGAPDPKAGAVESLYHLLEDD 128

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H      G+    S  +++DFF+ RR
Sbjct: 129 RFNHRVMAQGGLLAGPSATLLRDFFQARR 157


>gi|170702297|ref|ZP_02893195.1| CMP/dCMP deaminase zinc-binding [Burkholderia ambifaria IOP40-10]
 gi|170132806|gb|EDT01236.1| CMP/dCMP deaminase zinc-binding [Burkholderia ambifaria IOP40-10]
          Length = 193

 Score =  193 bits (492), Expect = 6e-48,   Method: Composition-based stats.
 Identities = 56/147 (38%), Positives = 79/147 (53%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
           +   FM  A   A+ A    E+PVGAV V  +++I+R  N      D +AHAE+ A+RM 
Sbjct: 30  RDLHFMRLAQAAAEEARAAGEVPVGAVLVCGDEVIARGFNHPIGGHDPSAHAEMAALRMA 89

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
            + L    +P  +LYVTLEPC MCA AI  ARI R+ YGA++PK G   +    +     
Sbjct: 90  AQHLQNYRMPGCELYVTLEPCLMCAGAIMHARIARVVYGAADPKTGACGSVIDAFANPQL 149

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H  E+  G+        ++ FF ERR
Sbjct: 150 NHHTEVTGGVLADECGAALKSFFAERR 176


>gi|288929641|ref|ZP_06423485.1| cytidine/deoxycytidylate deaminase family protein [Prevotella sp.
           oral taxon 317 str. F0108]
 gi|288329146|gb|EFC67733.1| cytidine/deoxycytidylate deaminase family protein [Prevotella sp.
           oral taxon 317 str. F0108]
          Length = 144

 Score =  193 bits (492), Expect = 6e-48,   Method: Composition-based stats.
 Identities = 53/149 (35%), Positives = 80/149 (53%), Gaps = 5/149 (3%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M+     M  AL+EA+ A  + E+P+GAV     ++++RA N    L DVTAHAE+ AI 
Sbjct: 1   MQVDEQMMRKALDEARQALAQGEVPIGAVIACKGRVVARAHNLTETLCDVTAHAEMQAIT 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
               +L  + LPE  LYVT+EPC MCA A   A++ R+ YG  + K G      + +   
Sbjct: 61  AAANMLGGKYLPECTLYVTVEPCPMCAGACGWAQLGRIVYGTRDEKRG-----YERFAPN 115

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             H    +  G+ E+  R++++ FF   R
Sbjct: 116 VLHAKATVTAGVLEEECRELMKSFFSGLR 144


>gi|260550109|ref|ZP_05824323.1| cytosine/adenosine deaminase [Acinetobacter sp. RUH2624]
 gi|260406864|gb|EEX00343.1| cytosine/adenosine deaminase [Acinetobacter sp. RUH2624]
          Length = 167

 Score =  193 bits (492), Expect = 6e-48,   Method: Composition-based stats.
 Identities = 60/148 (40%), Positives = 78/148 (52%), Gaps = 3/148 (2%)

Query: 1   MKK--GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           M K     +M  A E+A+ AA + EIPVGAV V  NK+I    N    L D TAHAEI A
Sbjct: 1   MSKFSDEYWMQLAYEQAELAAEQGEIPVGAVIVSQNKLIGAGFNAPIGLSDPTAHAEIQA 60

Query: 59  IRMGCRILSQEILP-EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFY 117
           IR  C++L    LP +  LYVTLEPCTMC  A+  ARI+ + +G   PK G + +  Q  
Sbjct: 61  IRSACQLLKNYRLPEDATLYVTLEPCTMCVGALVHARIKHVVFGTVEPKAGSLVSTRQLL 120

Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDFF 145
                +H      G   ++  Q +  FF
Sbjct: 121 ENGYYNHKFTFEQGCLHEKCAQQLSLFF 148


>gi|302870406|ref|YP_003839043.1| CMP/dCMP deaminase [Micromonospora aurantiaca ATCC 27029]
 gi|302573265|gb|ADL49467.1| CMP/dCMP deaminase zinc-binding [Micromonospora aurantiaca ATCC
           27029]
          Length = 210

 Score =  193 bits (492), Expect = 6e-48,   Method: Composition-based stats.
 Identities = 52/153 (33%), Positives = 80/153 (52%), Gaps = 8/153 (5%)

Query: 2   KKGNVFMSCALEEAQNA-------ALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAH 53
           ++  ++M  ALE A             +++PVGAV    +   ++   N      D TAH
Sbjct: 58  QRHELWMRRALEVAVTGPDGPAADRDADDVPVGAVLYGPDGTELAIGRNERELTGDPTAH 117

Query: 54  AEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENG 113
           AE+LA+R   + L +  L +  L VTLEPCTMCA AI+LAR+  + +GA  PK G + + 
Sbjct: 118 AEVLALRRAAQRLGRWRLDDCTLVVTLEPCTMCAGAIALARVSTVVFGAWEPKTGAVGSL 177

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
                     H PE+Y G+ E+ S  +++ FF+
Sbjct: 178 WDVLRDRRVTHRPEVYGGVLERESATLLRAFFR 210


>gi|239948393|ref|ZP_04700146.1| cytosine/adenosine deaminase [Rickettsia endosymbiont of Ixodes
           scapularis]
 gi|239922669|gb|EER22693.1| cytosine/adenosine deaminase [Rickettsia endosymbiont of Ixodes
           scapularis]
          Length = 159

 Score =  193 bits (492), Expect = 6e-48,   Method: Composition-based stats.
 Identities = 64/148 (43%), Positives = 94/148 (63%), Gaps = 2/148 (1%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVL--NNKIISRAGNRNRELKDVTAHAEILAIRM 61
            N FM  AL++A+ A  +NE+PVGAV V   N KII+   N   E  +   HAEI+AI  
Sbjct: 12  NNFFMEQALKQARIAFDKNEVPVGAVIVDRLNQKIIASTHNNTEEKNNALCHAEIIAINE 71

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
            C ++  + L + D+YVTLE C MCAAAI+ +R++RL+YGA + K G +E+  +++  + 
Sbjct: 72  ACNLIYSKNLNDYDIYVTLESCAMCAAAIAHSRLKRLFYGAFDSKHGAVESNLRYFNSSA 131

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
           C H PEIY GI  + S  ++++FFK  R
Sbjct: 132 CFHRPEIYSGILAEDSGLLMKEFFKRIR 159


>gi|163853270|ref|YP_001641313.1| CMP/dCMP deaminase zinc-binding [Methylobacterium extorquens PA1]
 gi|163664875|gb|ABY32242.1| CMP/dCMP deaminase zinc-binding [Methylobacterium extorquens PA1]
          Length = 147

 Score =  193 bits (492), Expect = 6e-48,   Method: Composition-based stats.
 Identities = 72/128 (56%), Positives = 90/128 (70%)

Query: 22  NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81
            E+PVGA  V +  +++ AGNR R L D TAHAEILAIR  C  L  E L   DLYVTLE
Sbjct: 19  GEVPVGAAVVRDGTVLAVAGNRPRTLSDPTAHAEILAIRAACAALRDERLTGCDLYVTLE 78

Query: 82  PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141
           PC MCA AI+ ARIRRLYY AS+PKGGG+E+G + +   TCHH+PE+Y G  E  +  ++
Sbjct: 79  PCPMCAGAIAFARIRRLYYAASDPKGGGVEHGPRVFNQPTCHHAPEVYSGFREGEAAGLL 138

Query: 142 QDFFKERR 149
           ++FF ERR
Sbjct: 139 REFFAERR 146


>gi|58584428|ref|YP_198001.1| cytosine/adenosine deaminase [Wolbachia endosymbiont strain TRS of
           Brugia malayi]
 gi|58418744|gb|AAW70759.1| Cytosine/adenosine deaminase [Wolbachia endosymbiont strain TRS of
           Brugia malayi]
          Length = 143

 Score =  193 bits (492), Expect = 6e-48,   Method: Composition-based stats.
 Identities = 72/142 (50%), Positives = 93/142 (65%), Gaps = 5/142 (3%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  A+E+A+ A   +EIP+GAV V  + IIS A N      D TAHAE+L IR  C +LS
Sbjct: 1   MEFAVEQAKLAKKNDEIPIGAVIVSGDNIISFAHN---ISNDPTAHAEMLVIRQACELLS 57

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
             +L   D+YVTLEPC MCA AIS ARI+RLY+GA N KGGGIENG + +    C H PE
Sbjct: 58  TSVLCNADMYVTLEPCPMCAQAISFARIKRLYFGAYNSKGGGIENGAKIFQF--CSHVPE 115

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
           +Y G+ E     +++DFF++ R
Sbjct: 116 VYGGVLETECSFLLKDFFEKLR 137


>gi|332292166|ref|YP_004430775.1| CMP/dCMP deaminase zinc-binding protein [Krokinobacter diaphorus
           4H-3-7-5]
 gi|332170252|gb|AEE19507.1| CMP/dCMP deaminase zinc-binding protein [Krokinobacter diaphorus
           4H-3-7-5]
          Length = 149

 Score =  193 bits (492), Expect = 6e-48,   Method: Composition-based stats.
 Identities = 60/147 (40%), Positives = 82/147 (55%), Gaps = 6/147 (4%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
               FM  AL+EAQ A  + EIPVGAV V++N II+RA N    L DVTAHAE+ AI   
Sbjct: 6   DDAYFMKKALQEAQAAFDQGEIPVGAVVVIDNMIIARAHNLTERLTDVTAHAEMQAITSA 65

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
              +  + L +  LYVTLEPC MCA A+  ++I R+ YGA + + G    GT        
Sbjct: 66  SNFIGGKYLQQCTLYVTLEPCQMCAGALYWSQIGRIVYGAKDLRRGYDVMGTIL------ 119

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           H   ++  G+  Q    I++ FF ++R
Sbjct: 120 HPKTKVESGVLAQECESIMKRFFVDKR 146


>gi|189501687|ref|YP_001957404.1| hypothetical protein Aasi_0231 [Candidatus Amoebophilus asiaticus
           5a2]
 gi|189497128|gb|ACE05675.1| hypothetical protein Aasi_0231 [Candidatus Amoebophilus asiaticus
           5a2]
          Length = 155

 Score =  193 bits (492), Expect = 6e-48,   Method: Composition-based stats.
 Identities = 63/147 (42%), Positives = 88/147 (59%), Gaps = 5/147 (3%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
               FM  AL+EA  A   NEIPVGAV V NN+II++A N+  +LKD TAHAE+LA+   
Sbjct: 13  DDEYFMRIALQEAMKAYEVNEIPVGAVVVSNNRIIAKAHNQVEKLKDATAHAEMLALSSA 72

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
              +  + LP+  LYVTLEPC MCA+A   +++ R+ + AS+ + G    GT        
Sbjct: 73  FSYIGGKYLPDCTLYVTLEPCLMCASATFWSKLSRIVFSASDIRLGYRTFGTNV-----L 127

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           H   +I  GI EQ S++++Q FF + R
Sbjct: 128 HPKTKIDAGILEQESQKVLQSFFAKLR 154


>gi|255037951|ref|YP_003088572.1| CMP/dCMP deaminase zinc-binding [Dyadobacter fermentans DSM 18053]
 gi|254950707|gb|ACT95407.1| CMP/dCMP deaminase zinc-binding [Dyadobacter fermentans DSM 18053]
          Length = 150

 Score =  193 bits (492), Expect = 7e-48,   Method: Composition-based stats.
 Identities = 53/147 (36%), Positives = 76/147 (51%), Gaps = 5/147 (3%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
             + FM  AL  A  A    EIPVGA+ V  ++II R  N+   L DVTAHAE++AI   
Sbjct: 8   TDHFFMEEALALAHKAYEEGEIPVGALVVAKDRIIGRGYNQTERLNDVTAHAEMIAITAA 67

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
              L  + L +  LYVTLEPC MCA A+   +++R+  GA + K G              
Sbjct: 68  ADHLGSKYLTDCTLYVTLEPCVMCAGALYWTQVKRVVVGAMDEKRG-----FSRVGQPLL 122

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           H   ++  GI    S++++  FF++ R
Sbjct: 123 HPKTKLVTGIMATESQELLLKFFRQLR 149


>gi|220918865|ref|YP_002494169.1| CMP/dCMP deaminase zinc-binding [Anaeromyxobacter dehalogenans
           2CP-1]
 gi|219956719|gb|ACL67103.1| CMP/dCMP deaminase zinc-binding [Anaeromyxobacter dehalogenans
           2CP-1]
          Length = 154

 Score =  193 bits (492), Expect = 7e-48,   Method: Composition-based stats.
 Identities = 57/138 (41%), Positives = 79/138 (57%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  AL  A+ AA R E+PVGAVA+   +++ R  N     +D TAHAE+LAI+   R L 
Sbjct: 1   MQEALGLAREAAARGEVPVGAVALFEGRVVGRGANAREAARDPTAHAELLAIQEAARTLG 60

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
           +  L  V + VTLEPC MCA A+ LARI RL YGAS+PK G   +          +H   
Sbjct: 61  RWRLTGVTVVVTLEPCAMCAGAMVLARIDRLVYGASDPKAGCTGSLQDLSADPRLNHRFP 120

Query: 128 IYPGISEQRSRQIIQDFF 145
           +  G+  + S ++++ FF
Sbjct: 121 VERGVLAEESGELLRAFF 138


>gi|84501544|ref|ZP_00999716.1| hypothetical protein OB2597_15120 [Oceanicola batsensis HTCC2597]
 gi|84390165|gb|EAQ02724.1| hypothetical protein OB2597_15120 [Oceanicola batsensis HTCC2597]
          Length = 154

 Score =  193 bits (492), Expect = 7e-48,   Method: Composition-based stats.
 Identities = 75/144 (52%), Positives = 97/144 (67%), Gaps = 1/144 (0%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNN-KIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           FM  AL+EA+ AA R E+PVGAV V    ++++R GNR RE  D +AHAE+L IR  C  
Sbjct: 9   FMHLALDEARAAAARGEVPVGAVLVSPGGEVVARDGNRTREKADPSAHAEMLVIRAACAA 68

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
              E LP  DLYVTLEPC MCAA I  ARI RLYYGA++PK GG+  G + +T   CHH 
Sbjct: 69  AGSERLPGHDLYVTLEPCPMCAAVIGAARIARLYYGAADPKSGGLGQGPRIFTHPQCHHV 128

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
           PE+Y GI  + +  +++ FF++RR
Sbjct: 129 PEVYDGIGAREAEDLLKGFFRDRR 152


>gi|42520340|ref|NP_966255.1| cytidine and deoxycytidylate deaminase family protein [Wolbachia
           endosymbiont of Drosophila melanogaster]
 gi|42410078|gb|AAS14189.1| cytidine and deoxycytidylate deaminase family protein [Wolbachia
           endosymbiont of Drosophila melanogaster]
          Length = 135

 Score =  193 bits (492), Expect = 7e-48,   Method: Composition-based stats.
 Identities = 72/142 (50%), Positives = 92/142 (64%), Gaps = 8/142 (5%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  A+E+A+ A   +E+P+GAV V  + IIS A N      D TAHAE+LAIR      S
Sbjct: 1   MELAIEQAKLAQKNDEVPIGAVIVSGDNIISSAHN---ISSDPTAHAEMLAIRQA---FS 54

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
              L + D+YVTLEPC MCA AIS ARI+RLY+GA NPKGGGIENG + +    C H PE
Sbjct: 55  TPTLCDADMYVTLEPCPMCAQAISFARIKRLYFGAYNPKGGGIENGAKIFQF--CSHIPE 112

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
           +Y GI E     +++DFF++ R
Sbjct: 113 VYGGILEIECSFLLKDFFEKLR 134


>gi|307243435|ref|ZP_07525591.1| putative thiamine-phosphate pyrophosphorylase [Peptostreptococcus
           stomatis DSM 17678]
 gi|306493159|gb|EFM65156.1| putative thiamine-phosphate pyrophosphorylase [Peptostreptococcus
           stomatis DSM 17678]
          Length = 391

 Score =  193 bits (492), Expect = 7e-48,   Method: Composition-based stats.
 Identities = 57/144 (39%), Positives = 81/144 (56%)

Query: 6   VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
            FMS AL+EA+ A    E P+GAV V + +I+ R  N+     D T HAE++AI+   + 
Sbjct: 243 YFMSEALKEARKAYAMKETPIGAVVVYDGQIVGRGFNQVELTGDPTQHAEMVAIQEAAKA 302

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           L +  L +  +YVT+EPC MCA AI  +RI+ LY GAS+ K   +     F         
Sbjct: 303 LGRWRLYDCQMYVTMEPCLMCAGAIENSRIKSLYIGASHKKNHLVGKHNDFKLEVYKDRK 362

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
            +   GI E+ + +I+ DFFKERR
Sbjct: 363 IDYEFGILEKEASKILTDFFKERR 386


>gi|311234063|gb|ADP86917.1| CMP/dCMP deaminase zinc-binding protein [Desulfovibrio vulgaris
           RCH1]
          Length = 214

 Score =  193 bits (492), Expect = 7e-48,   Method: Composition-based stats.
 Identities = 56/146 (38%), Positives = 76/146 (52%), Gaps = 1/146 (0%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
              M  AL EA+ A    E+PVGAV V    +II R  NR     D +AHAE++A+RM  
Sbjct: 67  ERLMDEALAEARLAQAEGEVPVGAVVVDKAGRIIGRGHNRCLRDNDPSAHAEMVALRMAA 126

Query: 64  RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123
              +   L    L VTLEPC MCA AI  AR+  + YGA +PK G + +  + +     +
Sbjct: 127 TTTANYRLGGTFLVVTLEPCLMCAGAIVHARVEGVVYGAEDPKAGAVTSCLEAFEQPFLN 186

Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149
           H P    G+  +    I++DFF  RR
Sbjct: 187 HRPWHMGGLRRRACTAILKDFFNGRR 212


>gi|316932708|ref|YP_004107690.1| CMP/dCMP deaminase zinc-binding protein [Rhodopseudomonas palustris
           DX-1]
 gi|315600422|gb|ADU42957.1| CMP/dCMP deaminase zinc-binding protein [Rhodopseudomonas palustris
           DX-1]
          Length = 148

 Score =  193 bits (492), Expect = 7e-48,   Method: Composition-based stats.
 Identities = 68/126 (53%), Positives = 91/126 (72%)

Query: 24  IPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83
           +P+G V V +  +I++AGNR    +D TAHAE+LAIR     L  E L + DLYVTLEPC
Sbjct: 23  VPIGCVIVRDGVVIAKAGNRTLTDRDPTAHAELLAIRQASAKLGSERLVDCDLYVTLEPC 82

Query: 84  TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQD 143
           TMCA AIS ARIRRLY+GA +PKGG +E+G +FY   TCHH+PE+Y  + E+ +  ++++
Sbjct: 83  TMCAGAISFARIRRLYFGAFDPKGGAVESGVRFYGQPTCHHAPEVYSAVGEREAAAMLRE 142

Query: 144 FFKERR 149
           FFK RR
Sbjct: 143 FFKARR 148


>gi|85709873|ref|ZP_01040938.1| cytidine/deoxycytidylate deaminase, zinc-binding region
           [Erythrobacter sp. NAP1]
 gi|85688583|gb|EAQ28587.1| cytidine/deoxycytidylate deaminase, zinc-binding region
           [Erythrobacter sp. NAP1]
          Length = 149

 Score =  193 bits (492), Expect = 7e-48,   Method: Composition-based stats.
 Identities = 71/149 (47%), Positives = 96/149 (64%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M+    FMS AL  A+ A+   E+P+GAV V + KII+   N  R+  D TAHAEI+AIR
Sbjct: 1   MRFPASFMSSALSLARAASELGEVPIGAVVVKDGKIIAEGHNETRDQNDPTAHAEIVAIR 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
                L  + L   DL+VTLEPC MCA AI+ ARI RLYY AS+PKGG +E+G + +   
Sbjct: 61  RAAAALGDDRLTGCDLWVTLEPCAMCAGAIAHARIARLYYAASDPKGGAVEHGARVFEQE 120

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
            C H PE+Y G+ E+ +  +++ FF+ERR
Sbjct: 121 QCLHRPEVYSGLGEEEAADMLRGFFRERR 149


>gi|330950762|gb|EGH51022.1| cytidine/deoxycytidylate deaminase, zinc-binding region
           [Pseudomonas syringae Cit 7]
          Length = 167

 Score =  193 bits (491), Expect = 7e-48,   Method: Composition-based stats.
 Identities = 60/148 (40%), Positives = 82/148 (55%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
            K   FM  AL  A   AL  E+PVGAV V N +II R  N      D +AHAE++AIR 
Sbjct: 10  SKDQYFMREALALAAQGALLGEVPVGAVLVQNGEIIGRGYNCPISGSDPSAHAEMVAIRD 69

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
             + L    LP   LYVTLEPC+MCA  I  +R+ R+ YGA  PK G +++  QF++ A 
Sbjct: 70  AAKTLDNYRLPGSTLYVTLEPCSMCAGLIVHSRVARVVYGALEPKAGIVQSQGQFFSQAF 129

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H      G+  +    ++ +FF+ RR
Sbjct: 130 LNHRVLFEGGVLGEECGTMLSEFFRMRR 157


>gi|320106996|ref|YP_004182586.1| CMP/dCMP deaminase zinc-binding protein [Terriglobus saanensis
           SP1PR4]
 gi|319925517|gb|ADV82592.1| CMP/dCMP deaminase zinc-binding protein [Terriglobus saanensis
           SP1PR4]
          Length = 171

 Score =  193 bits (491), Expect = 7e-48,   Method: Composition-based stats.
 Identities = 50/129 (38%), Positives = 67/129 (51%), Gaps = 1/129 (0%)

Query: 22  NEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80
            E+PVGA+ V    +I+SR  NR     D + HAE++A+R     L    L    LYVTL
Sbjct: 24  GEVPVGAIVVSPTGEILSRGQNRVIRDHDPSGHAEMVALRAAGVALENYRLTGCSLYVTL 83

Query: 81  EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140
           EPC MCA AI  ARI RL Y A +PK G   +  +       +H  E+  G+       +
Sbjct: 84  EPCAMCAGAILHARIARLVYAAPDPKAGACGSALEVMNHPRLNHRCEVVAGVLADECSTL 143

Query: 141 IQDFFKERR 149
           +Q FF+ RR
Sbjct: 144 LQTFFRSRR 152


>gi|254563191|ref|YP_003070286.1| tRNA-specific adenosine deaminase [Methylobacterium extorquens DM4]
 gi|254270469|emb|CAX26469.1| tRNA-specific adenosine deaminase [Methylobacterium extorquens DM4]
          Length = 147

 Score =  193 bits (491), Expect = 7e-48,   Method: Composition-based stats.
 Identities = 72/128 (56%), Positives = 90/128 (70%)

Query: 22  NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81
            E+PVGA  V +  +++ AGNR R L D TAHAEILAIR  C  L  E L   DLYVTLE
Sbjct: 19  GEVPVGAAVVRDGTVLAVAGNRPRTLCDPTAHAEILAIRAACAALRDERLTGCDLYVTLE 78

Query: 82  PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141
           PC MCA AI+ ARIRRLYY AS+PKGGG+E+G + +   TCHH+PE+Y G  E  +  ++
Sbjct: 79  PCPMCAGAIAFARIRRLYYAASDPKGGGVEHGPRVFNQPTCHHAPEVYSGFREGEAAGLL 138

Query: 142 QDFFKERR 149
           ++FF ERR
Sbjct: 139 REFFAERR 146


>gi|229819017|ref|YP_002880543.1| CMP/dCMP deaminase zinc-binding [Beutenbergia cavernae DSM 12333]
 gi|229564930|gb|ACQ78781.1| CMP/dCMP deaminase zinc-binding [Beutenbergia cavernae DSM 12333]
          Length = 158

 Score =  193 bits (491), Expect = 7e-48,   Method: Composition-based stats.
 Identities = 53/140 (37%), Positives = 73/140 (52%), Gaps = 1/140 (0%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRM 61
                +  ALE A+ A   +++PVGAV +  + ++I R  NR     D TAHAE++AIR 
Sbjct: 2   DHEEAIGLALELARGALETDDVPVGAVVLGPDGEVIGRGANRREADDDPTAHAEMIAIRE 61

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
               L Q  L    L VTLEPCTMCA A  LAR+ RL +GA +PK G   + T       
Sbjct: 62  AAAALGQWRLEGCTLAVTLEPCTMCAGATVLARLPRLVFGAYDPKAGAAGSVTDVVRDPR 121

Query: 122 CHHSPEIYPGISEQRSRQII 141
            +H  E+  G+ E    + +
Sbjct: 122 LNHRVEVTGGVREAECGEEL 141


>gi|282899006|ref|ZP_06306988.1| Cytidine/deoxycytidylate deaminase, zinc-binding region protein
           [Cylindrospermopsis raciborskii CS-505]
 gi|281196146|gb|EFA71061.1| Cytidine/deoxycytidylate deaminase, zinc-binding region protein
           [Cylindrospermopsis raciborskii CS-505]
          Length = 154

 Score =  193 bits (491), Expect = 8e-48,   Method: Composition-based stats.
 Identities = 58/143 (40%), Positives = 77/143 (53%), Gaps = 1/143 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           MS AL+ AQ A    E+PVG V V     +I +  NR +  +D TAHAEI+AIR   R L
Sbjct: 1   MSEALKLAQIAGDAGEVPVGCVIVNPQGNLIGQGENRKQRDQDPTAHAEIIAIRSAARTL 60

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  LYVTLEPC MCA AI  AR++ L Y   +PK G I            +H  
Sbjct: 61  QNWHLDQCTLYVTLEPCPMCAGAIIHARLQTLVYAVDDPKTGAIRTVINIPGSPASNHRL 120

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           ++  G+ E  SR+ +Q +F  +R
Sbjct: 121 QVIGGMLESASREKLQSWFVGQR 143


>gi|329851126|ref|ZP_08265883.1| cytidine and deoxycytidylate deaminase zinc-binding region family
           protein [Asticcacaulis biprosthecum C19]
 gi|328839972|gb|EGF89544.1| cytidine and deoxycytidylate deaminase zinc-binding region family
           protein [Asticcacaulis biprosthecum C19]
          Length = 154

 Score =  193 bits (491), Expect = 8e-48,   Method: Composition-based stats.
 Identities = 63/150 (42%), Positives = 88/150 (58%), Gaps = 2/150 (1%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNN--KIISRAGNRNRELKDVTAHAEILAI 59
            +    M  AL+ A  AA   E+P+GA+    +   +++ A N    L D  AHAEILA+
Sbjct: 3   SEDETLMLAALDLAHEAARSGEVPIGALIFDPSSKTVVATARNSPILLNDPCAHAEILAL 62

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
           R   + +    L  + LYVTLEPC MCA AIS ARI R+ YGA +PKGG + +G +F+  
Sbjct: 63  RAAGQAIGNYRLGGLWLYVTLEPCAMCAGAISHARIARVIYGAPDPKGGAVAHGPKFFAQ 122

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
            TCH  PE+  G+  + S  +++ FFKERR
Sbjct: 123 PTCHWRPEVTDGVLGEDSSALLKGFFKERR 152


>gi|21242782|ref|NP_642364.1| hypothetical protein XAC2038 [Xanthomonas axonopodis pv. citri str.
           306]
 gi|21108264|gb|AAM36900.1| conserved hypothetical protein [Xanthomonas axonopodis pv. citri
           str. 306]
          Length = 169

 Score =  193 bits (491), Expect = 8e-48,   Method: Composition-based stats.
 Identities = 51/148 (34%), Positives = 77/148 (52%), Gaps = 2/148 (1%)

Query: 4   GNVFMSCALEEAQNA-ALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRM 61
              +M  AL+ A+ A    +EIPVGAV V     ++    N N    D +AHAEI+A+R 
Sbjct: 15  DVHWMQHALQLAERAERDYDEIPVGAVLVDAQGNVLGEGWNFNIASHDPSAHAEIVAMRE 74

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
             R L+   L    LYVTLEPC MCA A+  ARI R+ + AS+PK G   +         
Sbjct: 75  AGRRLANHRLIGCTLYVTLEPCAMCAMAMIHARIARVVFAASDPKTGACGSVFDLLADPR 134

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H  ++  G+   ++   + ++F+ +R
Sbjct: 135 HNHRVQVCGGVLAAQASLRLTNYFRAKR 162


>gi|298207416|ref|YP_003715595.1| putative cytosine/adenosine deaminase [Croceibacter atlanticus
           HTCC2559]
 gi|83850052|gb|EAP87920.1| putative cytosine/adenosine deaminase [Croceibacter atlanticus
           HTCC2559]
          Length = 149

 Score =  193 bits (491), Expect = 8e-48,   Method: Composition-based stats.
 Identities = 55/147 (37%), Positives = 81/147 (55%), Gaps = 6/147 (4%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
               FM  AL EA+ A  + EIPVGA+ V NN II+R+ N    L DVTAHAE+  I   
Sbjct: 6   DDTYFMKKALLEAEEAYEKGEIPVGAIVVANNTIIARSHNLTELLNDVTAHAEMQVITSA 65

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
              +  + L +  LYVTLEPC MCA A+  ++I ++ +GA + + G    GT+       
Sbjct: 66  ANHIGGKYLTDCTLYVTLEPCQMCAGALYWSQISKIVFGAEDTQRGYRVMGTKL------ 119

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           H   ++  G+  + +  +++ FF ERR
Sbjct: 120 HPKTKVVSGVLAEDASLLLKRFFIERR 146


>gi|317403100|gb|EFV83631.1| zinc-binding hydrolase [Achromobacter xylosoxidans C54]
          Length = 163

 Score =  193 bits (491), Expect = 8e-48,   Method: Composition-based stats.
 Identities = 50/137 (36%), Positives = 73/137 (53%), Gaps = 1/137 (0%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           +   FM+ AL+EA+ A    E+PVGA+ V     I+ R  NR     D TAHAEI+A+R 
Sbjct: 10  QDADFMTLALDEARAAYDIGEVPVGALVVSAQGDILGRGYNRTIIDHDPTAHAEIVALRG 69

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
             R L    LP + +YVTLEPC MC  A+  AR+ R+ +GA +PK G   +     ++  
Sbjct: 70  AARALENYRLPGITVYVTLEPCVMCIGAMLHARLARVVFGAYDPKTGACGSVLDVGSVPR 129

Query: 122 CHHSPEIYPGISEQRSR 138
            +H   +  G+  +   
Sbjct: 130 LNHHTSVTGGVLAEPCG 146


>gi|67459711|ref|YP_247335.1| cytosine deaminase [Rickettsia felis URRWXCal2]
 gi|67005244|gb|AAY62170.1| Cytosine deaminase [Rickettsia felis URRWXCal2]
          Length = 159

 Score =  193 bits (491), Expect = 8e-48,   Method: Composition-based stats.
 Identities = 67/148 (45%), Positives = 97/148 (65%), Gaps = 2/148 (1%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVL--NNKIISRAGNRNRELKDVTAHAEILAIRM 61
            N FM  AL++A  A  +NE+PVGAV V   N KII  + N   E  +   HAEI+AI  
Sbjct: 12  NNFFMEQALKQAGIAFDKNEVPVGAVIVDRLNQKIIVSSHNNTEEKNNALYHAEIIAINE 71

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
            C ++S + L + D+YVTLEPC MCAAAI+ +R++RL+YGAS+ K G +E+  +++  + 
Sbjct: 72  ACNLISSKNLNDYDIYVTLEPCAMCAAAIAHSRLKRLFYGASDSKHGAVESNLRYFNSSV 131

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
           C + PEIY GI  + SR ++++FFK  R
Sbjct: 132 CFYRPEIYSGILAEDSRLLMKEFFKRIR 159


>gi|163856878|ref|YP_001631176.1| putative zinc-binding hydrolase [Bordetella petrii DSM 12804]
 gi|163260606|emb|CAP42908.1| putative zinc-binding hydrolase [Bordetella petrii]
          Length = 164

 Score =  193 bits (491), Expect = 9e-48,   Method: Composition-based stats.
 Identities = 50/132 (37%), Positives = 70/132 (53%), Gaps = 1/132 (0%)

Query: 19  ALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLY 77
               E+PVGAV V    +++    NR     D TAHAEI+A+R   R L    LP V LY
Sbjct: 27  WQAGEVPVGAVVVDAQGQVLGAGYNRTITDSDPTAHAEIVALRAAARRLGNYRLPGVSLY 86

Query: 78  VTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRS 137
           VTLEPC MC  A+  AR+ R+ YGA++PK G   +      +   +H   I  G+  +  
Sbjct: 87  VTLEPCVMCIGAMLHARLARVVYGAADPKTGACGSVLDVGAVVRLNHQTTITGGVLAEPC 146

Query: 138 RQIIQDFFKERR 149
             +++ FF+ RR
Sbjct: 147 GNLLRQFFRARR 158


>gi|296128347|ref|YP_003635597.1| CMP/dCMP deaminase zinc-binding protein [Cellulomonas flavigena DSM
           20109]
 gi|296020162|gb|ADG73398.1| CMP/dCMP deaminase zinc-binding protein [Cellulomonas flavigena DSM
           20109]
          Length = 176

 Score =  193 bits (491), Expect = 9e-48,   Method: Composition-based stats.
 Identities = 50/147 (34%), Positives = 72/147 (48%), Gaps = 1/147 (0%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
               M  AL EA+ A    ++PVGAV +  +  ++ R  N    + D T HAE++A+R  
Sbjct: 30  DEAAMDLALVEARAALDSGDVPVGAVVLGPDGAVVGRGRNVREAVADPTGHAEVVAMREA 89

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
              L +  L    L VTLEPC MCA A+  AR+ RL  GA + K G   +          
Sbjct: 90  AATLGRWRLDGCTLVVTLEPCLMCAGAVLQARVPRLVLGAWDEKAGACGSQWDVVRDRRA 149

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
            H  E+ PG+  + S  +++DFF   R
Sbjct: 150 LHRVEVVPGVRAEESATLLRDFFHPHR 176


>gi|312959178|ref|ZP_07773697.1| cytidine/deoxycytidylate deaminase family protein [Pseudomonas
           fluorescens WH6]
 gi|311286948|gb|EFQ65510.1| cytidine/deoxycytidylate deaminase family protein [Pseudomonas
           fluorescens WH6]
          Length = 165

 Score =  192 bits (490), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 59/148 (39%), Positives = 81/148 (54%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
            +   FM  AL  A   A+  E+PVGAV V + +II R  N      D +AHAE++AIR 
Sbjct: 13  SRDQHFMREALALAAQGAVLGEVPVGAVLVQDGEIIGRGFNCPISGNDPSAHAEMVAIRA 72

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
             R +S   L    LYVTLEPC+MCA  I  +RI R+ YGA  PK G +++  QF+T   
Sbjct: 73  AARAISNYRLVGSTLYVTLEPCSMCAGLIVHSRIARVVYGALEPKAGIVQSQGQFFTQGF 132

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H      G+  +    ++ +FFK RR
Sbjct: 133 LNHRVLFEGGVLAEECGTVLSEFFKARR 160


>gi|300853298|ref|YP_003778282.1| tRNA-specific adenosine deaminase [Clostridium ljungdahlii DSM
           13528]
 gi|300433413|gb|ADK13180.1| tRNA-specific adenosine deaminase [Clostridium ljungdahlii DSM
           13528]
          Length = 145

 Score =  192 bits (490), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 56/149 (37%), Positives = 78/149 (52%), Gaps = 4/149 (2%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           MK    FM  A+ +A+      E+PVGAV V +N+IIS   N    +  VTAHAE+LAI+
Sbjct: 1   MKD---FMLEAIRQAKKGLKLGEVPVGAVIVKDNEIISSCHNLKETVGIVTAHAEMLAIQ 57

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
               ILS   L    +YVTLEPC MCA AI   RI +LY G  +P  G   +        
Sbjct: 58  NASEILSNWRLTGCSMYVTLEPCPMCAGAILQCRINKLYIGTFDPTMGACGSVVNILQNR 117

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +   +I   +  ++  ++++ FFK RR
Sbjct: 118 RLNRWVDIQW-MYNEQCSEMLEKFFKSRR 145


>gi|328675327|gb|AEB28002.1| tRNA-specific adenosine-34 deaminase [Francisella cf. novicida
           3523]
          Length = 153

 Score =  192 bits (490), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 49/148 (33%), Positives = 76/148 (51%), Gaps = 1/148 (0%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
            +   FM  A E+A  A    E+P+GAV V +++II+   N+   L D TAHAEIL +R 
Sbjct: 6   NEDIFFMQKAYEQALLAHQAGEVPIGAVLVRDSQIIAENFNQTITLNDPTAHAEILVLRS 65

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
               +    L    LYVTLEPC MC   +  AR+  L Y   + + G   +  + +    
Sbjct: 66  AALEVGNYRLINTKLYVTLEPCIMCLGGLIQARVSELVYACDDSRVGAF-SREKLHQNKN 124

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H+  +  G+      ++++DFFK+RR
Sbjct: 125 INHNLGVTAGVMADECAKLLKDFFKQRR 152


>gi|251772814|gb|EES53374.1| putative zinc-binding cytidine/deoxycytidylate deaminase
           [Leptospirillum ferrodiazotrophum]
          Length = 158

 Score =  192 bits (490), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 54/148 (36%), Positives = 83/148 (56%), Gaps = 1/148 (0%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           +    FM+ AL  A+N    +++PVGA+ V+  +I+    N+ R   D TAHAEI+A+R 
Sbjct: 10  QADVYFMNKALNLARNGI-VDDVPVGAIVVVGGEIVGEGVNQGRASHDPTAHAEIIALRR 68

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
               L    LP   LYVTLEPC MC  A+   RI RL +GA +PK G   +    +    
Sbjct: 69  AAARLENYRLPLSTLYVTLEPCLMCLGAMMEGRIHRLVFGARDPKRGVAGSLYDLHNDPR 128

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
             H  ++  G+ E+ SR++++ FF+++R
Sbjct: 129 FTHRIKVESGLCEEESRELLRQFFEKKR 156


>gi|227529514|ref|ZP_03959563.1| tRNA-adenosine deaminase [Lactobacillus vaginalis ATCC 49540]
 gi|227350599|gb|EEJ40890.1| tRNA-adenosine deaminase [Lactobacillus vaginalis ATCC 49540]
          Length = 173

 Score =  192 bits (490), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 59/142 (41%), Positives = 85/142 (59%)

Query: 6   VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
            FM  A+ EA+ AAL +E+P+GAV     KII R  N   + +DVT HAE+LAI   C  
Sbjct: 14  KFMRAAIAEAKKAALLDEVPIGAVVTYQGKIIGRGHNMREKFQDVTYHAEMLAIMEACSY 73

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           L    L + DLYVTLEPC MC+ AI  ARIR ++YGA++PK G +++          +H 
Sbjct: 74  LHSWRLEDCDLYVTLEPCMMCSGAIVNARIRNVFYGATDPKAGTVDSLYHLLGDDRLNHQ 133

Query: 126 PEIYPGISEQRSRQIIQDFFKE 147
             +  G+  ++  Q+++DFF+ 
Sbjct: 134 AYVTAGVLGEQCSQMLKDFFRA 155


>gi|312891108|ref|ZP_07750631.1| CMP/dCMP deaminase zinc-binding [Mucilaginibacter paludis DSM
           18603]
 gi|311296416|gb|EFQ73562.1| CMP/dCMP deaminase zinc-binding [Mucilaginibacter paludis DSM
           18603]
          Length = 159

 Score =  192 bits (490), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 49/149 (32%), Positives = 78/149 (52%), Gaps = 5/149 (3%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +   + FM  AL+EA+ A   +EIP+GA+ V   +II R  N    L DV+AHAE+ A+ 
Sbjct: 13  ISPDDFFMKEALKEARLALAEDEIPIGALVVCKGQIIGRGHNLTERLNDVSAHAEMQALT 72

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
                   + LP+  LYVT+EPC MCA A    ++ ++ +GA + + G            
Sbjct: 73  AATNYTGGKYLPDCTLYVTMEPCVMCAGASYWFQVGKIVFGAYDTRLG-----FGRLNQK 127

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             H    I  GI E    +++++FF+++R
Sbjct: 128 ITHPKTLITGGIMENECSELVREFFRKKR 156


>gi|150024385|ref|YP_001295211.1| cytosine/adenosine deaminase [Flavobacterium psychrophilum
           JIP02/86]
 gi|149770926|emb|CAL42391.1| Probable cytosine/adenosine deaminase [Flavobacterium psychrophilum
           JIP02/86]
          Length = 146

 Score =  192 bits (490), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 59/147 (40%), Positives = 87/147 (59%), Gaps = 6/147 (4%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
               FM  AL+EA  A  + EIPVGA+ V+NN+II+++ N    L DVTAHAE+ AI   
Sbjct: 6   TDEYFMRKALQEAYVAFDKEEIPVGAIVVINNRIIAKSHNLTELLNDVTAHAEMQAITAS 65

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
              L  + L    LYVTLEPC MCA A+  ++I ++ +GAS+P+ G  + GTQ       
Sbjct: 66  ANFLGGKYLTNCILYVTLEPCQMCAGALYWSQISKIVFGASDPQRGFTKMGTQL------ 119

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           H    +  GI E    +++++FF+++R
Sbjct: 120 HPKTIVVNGILESECGELMKEFFRKKR 146


>gi|311694940|gb|ADP97813.1| cytidine/deoxycytidylate deaminase family protein [marine bacterium
           HP15]
          Length = 167

 Score =  192 bits (490), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 58/143 (40%), Positives = 75/143 (52%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
           +   +M+ AL+ A  AA + E+PVGAV VL+ K I    N      D TAHAEI A+R  
Sbjct: 7   EDERWMNRALQLAGEAAAKGEVPVGAVVVLDGKEIGAGFNAPISGCDPTAHAEIRALRDA 66

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
              +    LP+  LYVTLEPCTMC  AI   RI RL YGA  PK G IE+  +       
Sbjct: 67  AARVGNYRLPDATLYVTLEPCTMCVGAIVHGRISRLVYGAREPKAGAIESARRTLEEPHL 126

Query: 123 HHSPEIYPGISEQRSRQIIQDFF 145
           +       G+   +  Q+I +FF
Sbjct: 127 NWDVTAVGGVLSDQCSQVISEFF 149


>gi|184157936|ref|YP_001846275.1| cytosine/adenosine deaminase [Acinetobacter baumannii ACICU]
 gi|332872773|ref|ZP_08440739.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Acinetobacter baumannii 6014059]
 gi|183209530|gb|ACC56928.1| Cytosine/adenosine deaminase [Acinetobacter baumannii ACICU]
 gi|322508255|gb|ADX03709.1| Putative deaminase [Acinetobacter baumannii 1656-2]
 gi|323517881|gb|ADX92262.1| cytosine/adenosine deaminase [Acinetobacter baumannii TCDC-AB0715]
 gi|332739070|gb|EGJ69931.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Acinetobacter baumannii 6014059]
          Length = 167

 Score =  192 bits (490), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 60/148 (40%), Positives = 77/148 (52%), Gaps = 3/148 (2%)

Query: 1   MKK--GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           M K     +M  A E+A+ AA + EIPVGAV V  NK+I    N    L D TAHAEI A
Sbjct: 1   MSKFSDEYWMQLAYEQAELAAKQGEIPVGAVIVSQNKLIGAGFNAPIGLSDPTAHAEIQA 60

Query: 59  IRMGCRILSQEILP-EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFY 117
           IR  C  L    LP +  LYVTLEPCTMC  A+  ARI+ + +G + PK G + +  Q  
Sbjct: 61  IRAACESLKNYRLPEDATLYVTLEPCTMCVGALVHARIKHVVFGTTEPKAGSLVSARQLL 120

Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDFF 145
                +H      G   ++  Q +  FF
Sbjct: 121 ENGYYNHKFTFEHGYLHEKCAQQLSLFF 148


>gi|86160056|ref|YP_466841.1| tRNA-adenosine deaminase [Anaeromyxobacter dehalogenans 2CP-C]
 gi|85776567|gb|ABC83404.1| tRNA-adenosine deaminase [Anaeromyxobacter dehalogenans 2CP-C]
          Length = 160

 Score =  192 bits (490), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 58/138 (42%), Positives = 79/138 (57%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  AL  A+ AA R E+PVGAVA+   +++ R  N     +D TAHAE+LAI+   R L 
Sbjct: 7   MQEALGLAREAAARGEVPVGAVALFEGRVVGRGANAREAARDPTAHAELLAIQEAARTLG 66

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
           +  L  V L VTLEPC MCA A+ LARI RL YGAS+PK G   +          +H   
Sbjct: 67  RWRLTGVTLVVTLEPCAMCAGAMVLARIDRLVYGASDPKAGCTGSLQDLSADPRLNHRFP 126

Query: 128 IYPGISEQRSRQIIQDFF 145
           +  G+  + S ++++ FF
Sbjct: 127 VERGLLAEESGELLRAFF 144


>gi|120554632|ref|YP_958983.1| CMP/dCMP deaminase, zinc-binding [Marinobacter aquaeolei VT8]
 gi|120324481|gb|ABM18796.1| tRNA-adenosine deaminase [Marinobacter aquaeolei VT8]
          Length = 167

 Score =  192 bits (490), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 57/144 (39%), Positives = 73/144 (50%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           K    +M+ AL  A+ AA   E+PVGA+ V + K +    N      D TAHAEI A+R 
Sbjct: 6   KNDQYWMARALMLAERAASIGEVPVGAIVVRDGKELGVGYNAPITGCDPTAHAEIRALRD 65

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
               +    L    LYVTLEPCTMC  AI  +RI RL YGA  PK G +E+  +    A 
Sbjct: 66  ASARVGNYRLTGATLYVTLEPCTMCVGAIVHSRISRLVYGAREPKAGAVESARRTLDEAH 125

Query: 122 CHHSPEIYPGISEQRSRQIIQDFF 145
            +   E    + E    Q+I DFF
Sbjct: 126 LNWQVEAEGSVLEGECGQVISDFF 149


>gi|119509443|ref|ZP_01628591.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [Nodularia
           spumigena CCY9414]
 gi|119465849|gb|EAW46738.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [Nodularia
           spumigena CCY9414]
          Length = 150

 Score =  192 bits (489), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 59/143 (41%), Positives = 77/143 (53%), Gaps = 1/143 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           MS AL+ AQ A    E+PVGAV +     +I+   NR    +D TAHAEI+A+R     L
Sbjct: 1   MSRALDLAQIAGDAGEVPVGAVIIDAGGNMIAEGENRKERDQDPTAHAEIIALRAAANSL 60

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  LYVTLEPC MCA AI  AR+++L YG  + K G I   T     A  +H  
Sbjct: 61  HNWRLNQCTLYVTLEPCPMCAGAIVQARLQQLVYGVDDTKTGAIRTVTNIPDGAASNHRL 120

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
            +  G+ E   RQ +Q +F  RR
Sbjct: 121 RVMGGVLESTCRQQLQTWFANRR 143


>gi|256827679|ref|YP_003151638.1| tRNA-adenosine deaminase [Cryptobacterium curtum DSM 15641]
 gi|256583822|gb|ACU94956.1| tRNA-adenosine deaminase [Cryptobacterium curtum DSM 15641]
          Length = 206

 Score =  192 bits (489), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 54/155 (34%), Positives = 78/155 (50%), Gaps = 12/155 (7%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNN------------KIISRAGNRNRELKDV 50
           + + +M  AL EA++A    EIP+GAV V               ++I+RAGNR     D 
Sbjct: 13  RDSEYMQMALNEARHAQGLGEIPIGAVVVYEPIDPATRRPLACPQVIARAGNRRETDADP 72

Query: 51  TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI 110
             HAE LA+R   R L    L    +YVTLEPC MCA  +  ARI    +GA +PK G +
Sbjct: 73  AGHAEFLALREAARRLGVWRLTGCTVYVTLEPCIMCAGLMHQARIDCCVFGAFDPKAGAL 132

Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
            +  + +     +HS  +  G+    S Q+++ FF
Sbjct: 133 GSLYRIHEDERLNHSFAVRSGVCADESAQLLRSFF 167


>gi|218961251|ref|YP_001741026.1| Cytosine/adenosine deaminase [Candidatus Cloacamonas
           acidaminovorans]
 gi|167729908|emb|CAO80820.1| Cytosine/adenosine deaminase [Candidatus Cloacamonas
           acidaminovorans]
          Length = 155

 Score =  192 bits (489), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 56/148 (37%), Positives = 82/148 (55%), Gaps = 1/148 (0%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           +   +FM  A+ EA+ A   +EIPVGA+ V NN II +  NR+R+L +  AH E L I  
Sbjct: 7   QNHYLFMQEAIAEAKKAFTEDEIPVGALLVKNNTIILKEHNRSRQLANPLAHCEKLLIDK 66

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
                    L +  LYVTLEPC MCA  I L++I  + YGA +PK G + +        +
Sbjct: 67  ILTSEPGF-LYDYTLYVTLEPCLMCAGMIILSKIGTVVYGAKDPKAGVVGSLYNVLNDKS 125

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H P +  GI EQ    ++++FF ++R
Sbjct: 126 FNHHPVVIGGILEQECAFLLEEFFHKKR 153


>gi|152997998|ref|YP_001342833.1| zinc-binding CMP/dCMP deaminase [Marinomonas sp. MWYL1]
 gi|150838922|gb|ABR72898.1| CMP/dCMP deaminase zinc-binding [Marinomonas sp. MWYL1]
          Length = 162

 Score =  192 bits (489), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 62/149 (41%), Positives = 85/149 (57%), Gaps = 1/149 (0%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M     +M  A+  A  AA  NEIPVGA+ VL+ +II    N    L D TAHAEI AIR
Sbjct: 1   MTDHE-WMERAIALAAKAASENEIPVGAIVVLDGEIIGEGYNAPISLCDPTAHAEIQAIR 59

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
           M C+ ++   LP   LYVTLEPC+MCA A+  ARI R+ Y A+ PK G +E+   F+   
Sbjct: 60  MACKTINNYRLPGATLYVTLEPCSMCAGAMVHARIDRVVYAATEPKSGIVESQGHFFEAP 119

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  ++  G+  + +   +  FF+ RR
Sbjct: 120 FLNHKVKVESGVLAEMASLQLTQFFQYRR 148


>gi|307729964|ref|YP_003907188.1| CMP/dCMP deaminase zinc-binding protein [Burkholderia sp. CCGE1003]
 gi|307584499|gb|ADN57897.1| CMP/dCMP deaminase zinc-binding protein [Burkholderia sp. CCGE1003]
          Length = 350

 Score =  192 bits (489), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 45/122 (36%), Positives = 69/122 (56%)

Query: 24  IPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83
           +PVGAV V  +++I++  N      D +AHAE++A+R   +++    LP  +LYVTLEPC
Sbjct: 201 VPVGAVLVRGDEVIAKGFNHPISAHDPSAHAEMVALRAAAQVVENYRLPGCELYVTLEPC 260

Query: 84  TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQD 143
            MCA AI  ARI R+ +GA +PK G   +    +     +H  E+  G+ E      ++ 
Sbjct: 261 LMCAGAIMHARIARVVFGARDPKTGACGSVVDAFANPQLNHHTEVTGGVLENECGAALKS 320

Query: 144 FF 145
           FF
Sbjct: 321 FF 322


>gi|17232364|ref|NP_488912.1| hypothetical protein all4872 [Nostoc sp. PCC 7120]
 gi|17134009|dbj|BAB76571.1| all4872 [Nostoc sp. PCC 7120]
          Length = 147

 Score =  192 bits (489), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 61/143 (42%), Positives = 79/143 (55%), Gaps = 1/143 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           MS ALE A+ A    EIPVGAV    +  +I+   NR    +D TAHAEI+A+R   +IL
Sbjct: 1   MSHALELAKVAGEAGEIPVGAVITDASGHLIAEGENRKERDQDPTAHAEIVALRAATKIL 60

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L E  LYVTLEPC MCA AI  +R+ +L YG  + K G I         A  +H  
Sbjct: 61  QTWRLHECTLYVTLEPCPMCAGAIIHSRLGKLVYGVDDTKTGAIRTVLNIPDSAASNHRL 120

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           ++  GI E   RQ +Q++F  RR
Sbjct: 121 QVIGGILESACRQHLQNWFVNRR 143


>gi|300811153|ref|ZP_07091665.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Lactobacillus delbrueckii subsp. bulgaricus
           PB2003/044-T3-4]
 gi|300497857|gb|EFK32867.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Lactobacillus delbrueckii subsp. bulgaricus
           PB2003/044-T3-4]
          Length = 171

 Score =  192 bits (489), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 51/130 (39%), Positives = 83/130 (63%), Gaps = 1/130 (0%)

Query: 21  RNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVT 79
           ++E+P+GAV V  + +II +  NR    +D TAHAEILAI+  C+ L    L +  L+VT
Sbjct: 24  QDEVPIGAVVVGPDGQIIGQGYNRRELDEDGTAHAEILAIKEACQKLDSWRLIDCSLFVT 83

Query: 80  LEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139
           LEPC MCA AI  +RI+ +Y+ A +PK G   +    +++   +H P++  G+ +++  Q
Sbjct: 84  LEPCAMCAGAIINSRIKEVYFAAMDPKAGAAGSVVDLFSVEKFNHHPKVIRGLYKEQGAQ 143

Query: 140 IIQDFFKERR 149
           +++DFF+E R
Sbjct: 144 LLKDFFREIR 153


>gi|296160206|ref|ZP_06843025.1| CMP/dCMP deaminase zinc-binding [Burkholderia sp. Ch1-1]
 gi|295889680|gb|EFG69479.1| CMP/dCMP deaminase zinc-binding [Burkholderia sp. Ch1-1]
          Length = 238

 Score =  192 bits (489), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 50/144 (34%), Positives = 77/144 (53%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           ++   FM+ A   A+ A    E+PVGAV V  +++I++  N      D +AHAE++A+R 
Sbjct: 67  ERDRRFMALAQAAAEEARAVGEVPVGAVLVRGDEVIAKGFNHPIGAHDPSAHAEMVALRA 126

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
             + +    LP  +LYVTLEPC MCA AI  ARI R+ +GA +PK G   +    +    
Sbjct: 127 AAQAVENYRLPGCELYVTLEPCLMCAGAIMHARIARVVFGARDPKTGACGSVVDAFANPQ 186

Query: 122 CHHSPEIYPGISEQRSRQIIQDFF 145
            +H   +  G+ E      ++ FF
Sbjct: 187 LNHHTSVTGGVLESECGAALKSFF 210


>gi|37520622|ref|NP_923999.1| putative cytidine and deoxycytidylate deaminase [Gloeobacter
           violaceus PCC 7421]
 gi|35211616|dbj|BAC88994.1| gll1053 [Gloeobacter violaceus PCC 7421]
          Length = 150

 Score =  192 bits (489), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 58/150 (38%), Positives = 82/150 (54%), Gaps = 1/150 (0%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAI 59
           MK  + +M  ALE A+ A    E+PVGA+ V  +  +++   NR     D TAHAEI+A+
Sbjct: 1   MKSHSEWMGMALELAREAGRVGEVPVGALVVDASGVLLATGANRRERDYDPTAHAEIVAM 60

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
           R  C  L    L +  LYVTLEPC MCA AI  +R+  L YGA +PK G + +       
Sbjct: 61  RAACAKLRDWRLTDCTLYVTLEPCAMCAGAILQSRLGLLVYGADDPKAGAVGSVLNLPAS 120

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
           A   H   +  GI E+  R ++  +F+E+R
Sbjct: 121 AVSFHRLPVVAGIEERACRDLLCRWFEEQR 150


>gi|157826299|ref|YP_001494019.1| cytosine deaminase [Rickettsia akari str. Hartford]
 gi|157800257|gb|ABV75511.1| cytosine deaminase [Rickettsia akari str. Hartford]
          Length = 159

 Score =  192 bits (489), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 67/151 (44%), Positives = 99/151 (65%), Gaps = 2/151 (1%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILA 58
           M   N FM  AL++A+ A  +NE+PVGAV V  LN KI+  + N   E  +   HAEI+A
Sbjct: 9   MSFNNFFMEQALKQARLAFDKNEVPVGAVMVERLNQKIVINSHNNTEEKNNALYHAEIIA 68

Query: 59  IRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
           I   C ++S + L + D+YVTLEPC MCAAAI+ +R++RL+YGAS+ K G +E+  +++ 
Sbjct: 69  INEVCNLISSKNLNDYDIYVTLEPCAMCAAAIAHSRLKRLFYGASDSKHGAVESNLRYFN 128

Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
            + C H PEIY GI  + S  ++++FF+  R
Sbjct: 129 SSACFHRPEIYSGILAEDSGLLMKEFFRRIR 159


>gi|170744112|ref|YP_001772767.1| CMP/dCMP deaminase zinc-binding [Methylobacterium sp. 4-46]
 gi|168198386|gb|ACA20333.1| CMP/dCMP deaminase zinc-binding [Methylobacterium sp. 4-46]
          Length = 158

 Score =  192 bits (489), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 71/128 (55%), Positives = 95/128 (74%)

Query: 22  NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81
            E+PVGA  V +  +++ AGNR R L+D TAHAEILAIR  CR +  E L   DLYVTLE
Sbjct: 30  GEVPVGAAIVRDGTVLAVAGNRPRTLRDPTAHAEILAIRAACRAIGDERLIGCDLYVTLE 89

Query: 82  PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141
           PC MCAAAISLAR+RRLY+ A++PKGG +E+G +F+   TCHH+PE+Y G+ E  +  ++
Sbjct: 90  PCGMCAAAISLARLRRLYFAAADPKGGAVEHGPRFFAQPTCHHAPEVYGGLRESEAASLL 149

Query: 142 QDFFKERR 149
           ++FF+ RR
Sbjct: 150 REFFRARR 157


>gi|134096850|ref|YP_001102511.1| CMP/dCMP deaminase, zinc-binding [Saccharopolyspora erythraea NRRL
           2338]
 gi|291005105|ref|ZP_06563078.1| CMP/dCMP deaminase, zinc-binding protein [Saccharopolyspora
           erythraea NRRL 2338]
 gi|133909473|emb|CAL99585.1| CMP/dCMP deaminase, zinc-binding [Saccharopolyspora erythraea NRRL
           2338]
          Length = 155

 Score =  192 bits (489), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 51/149 (34%), Positives = 78/149 (52%), Gaps = 2/149 (1%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           +    +  ALE A  A    ++P+GAV    + ++++R  NR   L D TAHAEILA+R 
Sbjct: 7   RDTELVRAALEVAPGALSTGDVPIGAVVAGPDGRVLARDHNRREALHDPTAHAEILALRA 66

Query: 62  GCRILSQ-EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              +L     L    L VT+EPCTMCA A+ LAR+ R+ +G   P+ G + +        
Sbjct: 67  AAGVLGDGWRLEGCTLAVTVEPCTMCAGALVLARVERVVFGCWEPRTGAVGSLWDVVRDR 126

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H PE+  G+ E     +++ FF  +R
Sbjct: 127 RLNHRPEVVGGVLEAECSALLEAFFHGQR 155


>gi|162446945|ref|YP_001620077.1| Zn dependent nucleoside deaminase [Acholeplasma laidlawii PG-8A]
 gi|161985052|gb|ABX80701.1| probable Zn dependent nucleoside deaminase [Acholeplasma laidlawii
           PG-8A]
          Length = 146

 Score =  192 bits (488), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 56/136 (41%), Positives = 78/136 (57%), Gaps = 1/136 (0%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
             FM+ AL+EA+ A  ++E+PVGAV VL+ KII+RA N     + + AHAE LAI    +
Sbjct: 7   EYFMNEALKEAKKANDKDEVPVGAVVVLDGKIIARAHNLRESRQSIHAHAEFLAIEKAAK 66

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
            +    L   D+YVTLEPC MCA A+  ARI+ LYYGA +PK G +E+  +       +H
Sbjct: 67  KIGSWRLENADVYVTLEPCPMCAGAMIQARIKNLYYGAKDPKTGAVESVIKLLDNP-FNH 125

Query: 125 SPEIYPGISEQRSRQI 140
                 G+   +   I
Sbjct: 126 KIYYEGGLLMDKCSNI 141


>gi|281423636|ref|ZP_06254549.1| tRNA-specific adenosine deaminase [Prevotella oris F0302]
 gi|281402188|gb|EFB33019.1| tRNA-specific adenosine deaminase [Prevotella oris F0302]
          Length = 154

 Score =  192 bits (488), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 66/148 (44%), Positives = 87/148 (58%), Gaps = 5/148 (3%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
            K   +M  AL EA+ AA   EIP+GAV V  ++IISRA N   +L DVTAHAE+ AI  
Sbjct: 12  NKDEQYMRKALYEAERAAEEGEIPIGAVIVCKDRIISRAHNLTEKLHDVTAHAEMQAITS 71

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
              +L  + L +  LYVT+EPC MCA AI  A+I R+ YGAS+ K G      Q Y    
Sbjct: 72  AADLLGGKYLSDCTLYVTVEPCVMCAGAIGWAQIGRIVYGASDEKRG-----YQLYAPRA 126

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            H    +  G+ E   RQ++Q+FFK++R
Sbjct: 127 FHPKATVTRGVLEAECRQLMQEFFKQKR 154


>gi|289665842|ref|ZP_06487423.1| hypothetical protein XcampvN_22891 [Xanthomonas campestris pv.
           vasculorum NCPPB702]
          Length = 174

 Score =  192 bits (488), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 50/148 (33%), Positives = 74/148 (50%), Gaps = 2/148 (1%)

Query: 4   GNVFMSCALEEAQNA-ALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRM 61
              +M  AL  A+ A    +EIPVGA+ V     ++    N N    D +AHAEI+A+R 
Sbjct: 20  DLHWMQHALHLAERAERDYDEIPVGALVVDAEGNVLGEGWNFNIASHDPSAHAEIVAMRE 79

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
             R L+   L    LYVTLEPC MCA A+  ARI R+ + AS+PK G   +         
Sbjct: 80  AGRRLANHRLIGCTLYVTLEPCAMCAMAMIHARIARVVFAASDPKTGACGSVFDLLADPR 139

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H   +  G+    +   + ++F+ +R
Sbjct: 140 HNHHVRVSGGVLAAEASLRLTNYFRAKR 167


>gi|294647204|ref|ZP_06724803.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Bacteroides ovatus SD CC 2a]
 gi|294809184|ref|ZP_06767900.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Bacteroides xylanisolvens SD CC 1b]
 gi|292637491|gb|EFF55910.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Bacteroides ovatus SD CC 2a]
 gi|294443578|gb|EFG12329.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Bacteroides xylanisolvens SD CC 1b]
          Length = 145

 Score =  192 bits (488), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 60/149 (40%), Positives = 79/149 (53%), Gaps = 5/149 (3%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M     FM  AL EA  AA R E+PVGAV V   +II+RA N    L DVTAHAE+  I 
Sbjct: 1   MLDDIYFMKQALIEAGKAAERGEVPVGAVVVCKERIIARAHNLTETLNDVTAHAEMQVIT 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
               +L  + L E  LYVT+EPC MCA AI+ A+  +L +GA + K G      Q Y  +
Sbjct: 61  AAANVLGGKYLNECTLYVTVEPCVMCAGAIAWAQTGKLVFGAEDEKRG-----YQKYAGS 115

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             H    +  GI       ++++FF  +R
Sbjct: 116 ALHPKTVVVKGIMADECAALMKEFFAAKR 144


>gi|325106234|ref|YP_004275888.1| CMP/dCMP deaminase zinc-binding protein [Pedobacter saltans DSM
           12145]
 gi|324975082|gb|ADY54066.1| CMP/dCMP deaminase zinc-binding protein [Pedobacter saltans DSM
           12145]
          Length = 157

 Score =  192 bits (488), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 49/146 (33%), Positives = 73/146 (50%), Gaps = 5/146 (3%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
              FM  A +EA  A  ++E+P+GA+ V N K++ R  N    L DVTAHAE+ A     
Sbjct: 15  DEFFMKEAYKEALLAFDKDEVPIGAIIVANGKVVGRGHNLTERLNDVTAHAEMQAFTSAS 74

Query: 64  RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123
             +  + L    LYVT+EPC MCA A    +I R+ +GA + K G              H
Sbjct: 75  NTIGAKYLHNCTLYVTVEPCVMCAGASYWTQISRIVFGALDEKRG-----YSRLNPQIIH 129

Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149
              EI  G+  +    ++++FF ++R
Sbjct: 130 PKTEIVGGVMSEECAALMRNFFLKKR 155


>gi|299141289|ref|ZP_07034426.1| cytidine/deoxycytidylate deaminase family protein [Prevotella oris
           C735]
 gi|298577249|gb|EFI49118.1| cytidine/deoxycytidylate deaminase family protein [Prevotella oris
           C735]
          Length = 148

 Score =  192 bits (488), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 66/148 (44%), Positives = 87/148 (58%), Gaps = 5/148 (3%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
            K   +M  AL EA+ AA   EIP+GAV V  ++IISRA N   +L DVTAHAE+ AI  
Sbjct: 6   NKDEQYMRKALYEAERAAEEGEIPIGAVIVCKDRIISRAHNLTEKLHDVTAHAEMQAITS 65

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
              +L  + L +  LYVT+EPC MCA AI  A+I R+ YGAS+ K G      Q Y    
Sbjct: 66  AADLLGGKYLSDCTLYVTVEPCVMCAGAIGWAQIGRIVYGASDEKRG-----YQLYAPRA 120

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            H    +  G+ E   RQ++Q+FFK++R
Sbjct: 121 FHPKATVTRGVLEAECRQLMQEFFKQKR 148


>gi|291521262|emb|CBK79555.1| Cytosine/adenosine deaminases [Coprococcus catus GD/7]
          Length = 160

 Score =  192 bits (488), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 49/145 (33%), Positives = 74/145 (51%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M +   FM  AL +A+ AA  +E+P+G V V   KII+R  N+  + K+  +HAE+ AIR
Sbjct: 1   MTEDEKFMKAALAQAKKAAAIDEVPIGCVIVYEGKIIARGYNKRNKEKNTLSHAEMNAIR 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              + L    L    +Y+TLEPC MCA AI  AR+ R+  G+ N K G   +        
Sbjct: 61  KASKYLGDWRLEGCTMYITLEPCPMCAGAIVQARVDRVVIGSMNAKAGCAGSVLNVLQER 120

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFF 145
             +H  E+   +  +    ++  FF
Sbjct: 121 RFNHQVELTKDVLHEECSSMLSGFF 145


>gi|302872965|ref|YP_003841598.1| CMP/dCMP deaminase zinc-binding [Clostridium cellulovorans 743B]
 gi|307686520|ref|ZP_07628966.1| CMP/dCMP deaminase zinc-binding protein [Clostridium cellulovorans
           743B]
 gi|302575822|gb|ADL49834.1| CMP/dCMP deaminase zinc-binding [Clostridium cellulovorans 743B]
          Length = 147

 Score =  192 bits (488), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 57/146 (39%), Positives = 82/146 (56%), Gaps = 1/146 (0%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
            N F+  A+EEA+ A    E+PVGAV + ++K+I+ A N     K+VTAHAE+LAI+M  
Sbjct: 2   NNNFLKIAIEEAKKARELGEVPVGAVIIKDDKVIAAAHNLKETKKEVTAHAELLAIKMAS 61

Query: 64  RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123
            IL    L + ++YVTLEPC MCA+AI  +RI+++Y G   P  G   +          +
Sbjct: 62  EILDNWRLNDCEIYVTLEPCAMCASAIVQSRIKKIYIGTFEPTTGACGSVINLVQNEALN 121

Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149
               +   +       II +FFKERR
Sbjct: 122 SFVHVEW-LYSDECSDIITEFFKERR 146


>gi|160891295|ref|ZP_02072298.1| hypothetical protein BACUNI_03744 [Bacteroides uniformis ATCC 8492]
 gi|156859516|gb|EDO52947.1| hypothetical protein BACUNI_03744 [Bacteroides uniformis ATCC 8492]
          Length = 138

 Score =  192 bits (488), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 59/142 (41%), Positives = 78/142 (54%), Gaps = 5/142 (3%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  AL EA  A  R E+PVGAV V  ++II+RA N    L DVTAHAE+ AI      L 
Sbjct: 1   MKQALLEAHKAGERGEVPVGAVVVCKDRIIARAHNLTETLTDVTAHAEMQAITAAAATLG 60

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
            + L E  LYVT+EPC MCA AI+ A++ RL +GA + K G      Q Y     H   +
Sbjct: 61  GKYLNECTLYVTVEPCVMCAGAIAWAQMGRLVFGAEDEKRG-----YQRYASQALHPKTQ 115

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
           +  GI       ++++FF  +R
Sbjct: 116 VVKGILADECAALMKEFFAAKR 137


>gi|262384051|ref|ZP_06077187.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
 gi|301310955|ref|ZP_07216884.1| cytidine/deoxycytidylate deaminase family protein [Bacteroides sp.
           20_3]
 gi|262294949|gb|EEY82881.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
 gi|300831018|gb|EFK61659.1| cytidine/deoxycytidylate deaminase family protein [Bacteroides sp.
           20_3]
          Length = 146

 Score =  192 bits (488), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 64/147 (43%), Positives = 83/147 (56%), Gaps = 5/147 (3%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
               FM  AL EA+ AA   E+PVGAV + NN+II+RA N+   L DVTAHAE+LAI   
Sbjct: 5   NDEYFMKQALVEARAAASEGEVPVGAVIICNNQIIARAHNQTECLNDVTAHAEMLAITAA 64

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
             +L  + L    LYVT+EPC MCA AI  A++  + YGAS+ K G        +     
Sbjct: 65  AGVLGAKYLTNCSLYVTVEPCIMCAGAIGWAQLSTIVYGASDDKRG-----FSKFAPQAF 119

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           H    I  GI E+   + +Q FFK+RR
Sbjct: 120 HPKAIIKKGILEKECAEEMQRFFKQRR 146


>gi|54294609|ref|YP_127024.1| hypothetical protein lpl1685 [Legionella pneumophila str. Lens]
 gi|53754441|emb|CAH15925.1| hypothetical protein lpl1685 [Legionella pneumophila str. Lens]
          Length = 149

 Score =  192 bits (488), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 53/147 (36%), Positives = 75/147 (51%), Gaps = 3/147 (2%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
              +M  A E+A  A    E+PVGAV V  +N+++    N   +  D + HAEI AIR  
Sbjct: 5   DKFWMQLAYEQAVIARNEGEVPVGAVLVSKDNQLLGVGRNVIEKSHDPSDHAEIRAIRQA 64

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
            R L+   L +  LYVTLEPC MCA  +  ARI+RL +   + K G   +          
Sbjct: 65  SRKLNNHRLLDTTLYVTLEPCVMCAGLMVHARIKRLVFATRDFKAGAAGSIFNVL--HAL 122

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +HS  I  GI +    Q++ DFF++ R
Sbjct: 123 NHSVLIDEGIMQAECSQLLSDFFRKLR 149


>gi|170695254|ref|ZP_02886401.1| CMP/dCMP deaminase zinc-binding [Burkholderia graminis C4D1M]
 gi|170139874|gb|EDT08055.1| CMP/dCMP deaminase zinc-binding [Burkholderia graminis C4D1M]
          Length = 166

 Score =  192 bits (488), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 46/124 (37%), Positives = 68/124 (54%)

Query: 22  NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81
            E+PVGAV V  +++I+   N      D +AHAE++A+R   ++     LP  +LYVTLE
Sbjct: 15  GEVPVGAVLVRGDEVIATGFNHPIGAHDPSAHAEMVALRAAAQVAQNYRLPGCELYVTLE 74

Query: 82  PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141
           PC MCA AI  ARI R+ +GA +PK G   +    +     +H  E+  G+ E      +
Sbjct: 75  PCLMCAGAIMHARIARVVFGARDPKTGACGSVVDAFANPQLNHHTEVTGGVLESECGAAL 134

Query: 142 QDFF 145
           + FF
Sbjct: 135 KSFF 138


>gi|146329465|ref|YP_001209489.1| adenosine deaminase [Dichelobacter nodosus VCS1703A]
 gi|146232935|gb|ABQ13913.1| adenosine deaminase [Dichelobacter nodosus VCS1703A]
          Length = 157

 Score =  191 bits (487), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 57/148 (38%), Positives = 82/148 (55%), Gaps = 1/148 (0%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
               FM  ALE+AQ AA   EIP+GAV V   ++I+   NR     D +AH+EIL +R G
Sbjct: 2   NDVDFMRLALEQAQLAAEIGEIPIGAVLVYQQQVIAANFNRTISACDPSAHSEILVLREG 61

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
            + +    L E+ LYVT+EPC MC  A+  ARI +L +GA N +GG   +       A  
Sbjct: 62  AQRIKNYRLTEMALYVTVEPCVMCVGALIHARIEKLVFGAYNARGGACGSSFDLTRHAQL 121

Query: 123 HHSP-EIYPGISEQRSRQIIQDFFKERR 149
           +H   E+  G+     + ++Q FF++RR
Sbjct: 122 NHHINEVKGGVLAAECQLLLQQFFQKRR 149


>gi|301510605|ref|ZP_07235842.1| putative deaminase [Acinetobacter baumannii AB058]
          Length = 167

 Score =  191 bits (487), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 60/148 (40%), Positives = 77/148 (52%), Gaps = 3/148 (2%)

Query: 1   MKK--GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           M K     +M  A E+A+ AA + EIPVGAV V  NK+I    N    L D TAHAEI A
Sbjct: 1   MSKLSDEYWMQLAYEQAELAAKQGEIPVGAVIVSQNKLIGAGFNAPIGLSDPTAHAEIQA 60

Query: 59  IRMGCRILSQEILP-EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFY 117
           IR  C  L    LP +  LYVTLEPCTMC  A+  ARI+ + +G + PK G + +  Q  
Sbjct: 61  IRAACESLKNYRLPEDATLYVTLEPCTMCVGALVHARIKHVVFGTTEPKAGSLVSARQLL 120

Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDFF 145
                +H      G   ++  Q +  FF
Sbjct: 121 ENGYYNHKFTFEHGCLHEKCAQQLSLFF 148


>gi|325685703|gb|EGD27782.1| cytidine/deoxycytidylate deaminase [Lactobacillus delbrueckii
           subsp. lactis DSM 20072]
          Length = 169

 Score =  191 bits (487), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 52/130 (40%), Positives = 83/130 (63%), Gaps = 1/130 (0%)

Query: 21  RNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVT 79
           ++E+P+GAV V  + +II R  NR    +D TAHAEILAI+  C+ L    L +  L+VT
Sbjct: 24  QDEVPIGAVVVGPDGQIIGRGYNRRELDEDGTAHAEILAIKEACQKLDSWRLIDCSLFVT 83

Query: 80  LEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139
           LEPC MCA AI  +RI+ +Y+ A +PK G   +    +++   +H P++  G+ +++  Q
Sbjct: 84  LEPCAMCAGAIINSRIKEVYFAAMDPKAGAAGSVVDLFSVEKFNHHPKVIRGLYKEQGAQ 143

Query: 140 IIQDFFKERR 149
           +++DFF+E R
Sbjct: 144 LLKDFFREIR 153


>gi|307610417|emb|CBW99987.1| hypothetical protein LPW_17441 [Legionella pneumophila 130b]
          Length = 147

 Score =  191 bits (487), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 53/147 (36%), Positives = 75/147 (51%), Gaps = 3/147 (2%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
              +M  A E+A  A    E+PVGAV V  +N+++    N   +  D + HAEI AIR  
Sbjct: 3   DKFWMQLAYEQAVIARNEGEVPVGAVLVSKDNQLLGVGRNVIEKSHDPSDHAEIRAIRQA 62

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
            R L+   L +  LYVTLEPC MCA  +  ARI+RL +   + K G   +          
Sbjct: 63  SRKLNNHRLLDTTLYVTLEPCVMCAGLMVHARIKRLVFATRDFKAGAAGSMFNVL--HAL 120

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +HS  I  GI +    Q++ DFF++ R
Sbjct: 121 NHSVLIDEGIMQAECSQLLSDFFRKLR 147


>gi|212695506|ref|ZP_03303634.1| hypothetical protein ANHYDRO_00023 [Anaerococcus hydrogenalis DSM
           7454]
 gi|212677506|gb|EEB37113.1| hypothetical protein ANHYDRO_00023 [Anaerococcus hydrogenalis DSM
           7454]
          Length = 180

 Score =  191 bits (487), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 53/147 (36%), Positives = 79/147 (53%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
               +M  A+ EA+ A L  E+P+G V V N KII+R+ N   + K    HAEILAI   
Sbjct: 22  DDYFYMREAINEAKLARLEEEVPIGCVIVKNGKIIARSHNYTYKGKSALKHAEILAIDKA 81

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
            + +    L +  +YVT+EPC+MCA AI  +RI RL    ++ K G   + T      + 
Sbjct: 82  SKYVGDFRLEDCTMYVTMEPCSMCAGAIINSRIDRLVIALADVKRGACGSNTNITGDRSQ 141

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
            H  +   G+ + +S +I+Q FFK+ R
Sbjct: 142 LHFLDAEFGLMKDQSLEILQSFFKKLR 168


>gi|28493718|ref|NP_787879.1| hypothetical protein TWT751 [Tropheryma whipplei str. Twist]
 gi|28572904|ref|NP_789684.1| hypothetical protein TW763 [Tropheryma whipplei TW08/27]
 gi|28411037|emb|CAD67422.1| conserved hypothetical protein (putative deaminase) [Tropheryma
           whipplei TW08/27]
 gi|28476760|gb|AAO44848.1| unknown [Tropheryma whipplei str. Twist]
          Length = 170

 Score =  191 bits (487), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 54/147 (36%), Positives = 75/147 (51%), Gaps = 1/147 (0%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMG 62
               M  AL  A  A  + EIPVGAV    N K I+   N+  E KD T HAEI+AIR  
Sbjct: 24  DEKIMRKALCLAHAAGEKGEIPVGAVIADVNGKTIAEGFNKREESKDPTDHAEIIAIRKA 83

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
            ++L    L  + L+VT+EPCTMCA AI  +RI R+ +GA N K G + +          
Sbjct: 84  SQMLKDWRLSGLTLFVTMEPCTMCAGAIVTSRISRVVFGAFNNKTGSVGSRIDILRDEIL 143

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           + + E+  G+       ++  FF + R
Sbjct: 144 NTNIEVVSGVLISECEGVLAKFFADLR 170


>gi|323705214|ref|ZP_08116790.1| CMP/dCMP deaminase, zinc-binding [Thermoanaerobacterium
           xylanolyticum LX-11]
 gi|323535640|gb|EGB25415.1| CMP/dCMP deaminase, zinc-binding [Thermoanaerobacterium
           xylanolyticum LX-11]
          Length = 137

 Score =  191 bits (487), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 56/142 (39%), Positives = 73/142 (51%), Gaps = 5/142 (3%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  A++EA  +    E+PVGAV V +  II R  N     KD T HAEI AI+  C+ + 
Sbjct: 1   MKAAIDEAIISFKLGEMPVGAVVVKDGIIIGRGYNLKETEKDATQHAEINAIKDACKSIG 60

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
              L    LYVTLEPC MCA AI  +RI+R+Y GA +   G              +   E
Sbjct: 61  DWRLNGASLYVTLEPCPMCAGAIIESRIKRVYVGAESRDNGAAGTVYDL-----LNKKAE 115

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
           +Y GI E   +++I DFF   R
Sbjct: 116 VYFGIMEDECKKLINDFFSRLR 137


>gi|312869691|ref|ZP_07729838.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Lactobacillus oris PB013-T2-3]
 gi|311094740|gb|EFQ53037.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Lactobacillus oris PB013-T2-3]
          Length = 164

 Score =  191 bits (487), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 54/124 (43%), Positives = 75/124 (60%)

Query: 22  NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81
           NE+P+GAV V +N+II R  N     +DVT HAE+LAI   C  L    L + DLYVTLE
Sbjct: 23  NEVPIGAVVVKDNQIIGRGHNMREHFQDVTYHAEMLAIMEACERLHSWRLEDCDLYVTLE 82

Query: 82  PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141
           PC MC+ AI  ARI  LYYGA++PK G +++       +  +H   +  GI +    Q++
Sbjct: 83  PCIMCSGAIINARIANLYYGAADPKAGAVDSLYHLLADSRLNHQVRVESGIMQAECSQVL 142

Query: 142 QDFF 145
           ++FF
Sbjct: 143 KEFF 146


>gi|58039265|ref|YP_191229.1| cytosine deaminase [Gluconobacter oxydans 621H]
 gi|58001679|gb|AAW60573.1| Cytosine deaminase [Gluconobacter oxydans 621H]
          Length = 168

 Score =  191 bits (487), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 58/143 (40%), Positives = 89/143 (62%), Gaps = 1/143 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  AL+ A+ AA   E+PVGAV +  +  +++ A N      D +AHAE+LA+R     L
Sbjct: 16  MQIALQAAREAASCGEVPVGAVVLAPDGNVLAVARNHVEGAHDASAHAELLAMREAATRL 75

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  L VTLEPC+MCAAAI   RI R+ +GA +PKGGG+E+G + +   +C H P
Sbjct: 76  KSPRLTDCTLVVTLEPCSMCAAAIVHFRIGRVVFGAYDPKGGGVEHGPRIFERPSCLHRP 135

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+  G+ E+ + ++++ FF++ R
Sbjct: 136 EVIGGVCEREASEMLKAFFRKLR 158


>gi|301165417|emb|CBW24988.1| putative nucleotide deaminase [Bacteriovorax marinus SJ]
          Length = 158

 Score =  191 bits (487), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 52/143 (36%), Positives = 76/143 (53%), Gaps = 1/143 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           MS A++EA  A   +E+P+GA  V     I+S+  N      D   HAEI+AIR  C+  
Sbjct: 11  MSVAMDEAYKAYSIDEVPIGAAIVDESGNILSQCHNEKEHCNDPCGHAEIIAIREACKKR 70

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L    +YVTLEPC MC +A+  AR+ +L + A +PKGG I      Y     +H+ 
Sbjct: 71  GDWRLSGCTIYVTLEPCPMCLSAMIQARVDKLVFAAYDPKGGAISLNYNLYKDKRLNHNF 130

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
            +  GI    S +++  FF+E+R
Sbjct: 131 SVVGGIGHFESSKVLSRFFREKR 153


>gi|330807694|ref|YP_004352156.1| deaminase [Pseudomonas brassicacearum subsp. brassicacearum NFM421]
 gi|327375802|gb|AEA67152.1| putative deaminase [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
          Length = 165

 Score =  191 bits (487), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 58/148 (39%), Positives = 81/148 (54%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
            +   FM  AL  A   A   E+PVGAV V + +II R  N      D +AHAE++AIR 
Sbjct: 13  SRDQDFMREALALAAQGAALGEVPVGAVLVQDGEIIGRGFNCPISGHDPSAHAEMVAIRA 72

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
             + +S   LP   LYVTLEPC+MCA  I  +RI R+ YGA  PK G +++  QF++   
Sbjct: 73  AAQAVSNYRLPGSTLYVTLEPCSMCAGLIVHSRIARVVYGALEPKAGIVQSQGQFFSQGF 132

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H      G+  +    ++ +FFK RR
Sbjct: 133 LNHRVMYEGGVLAEECSTVLSEFFKARR 160


>gi|169796135|ref|YP_001713928.1| putative deaminase [Acinetobacter baumannii AYE]
 gi|301597400|ref|ZP_07242408.1| putative deaminase [Acinetobacter baumannii AB059]
 gi|169149062|emb|CAM86939.1| putative deaminase [Acinetobacter baumannii AYE]
          Length = 167

 Score =  191 bits (487), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 60/148 (40%), Positives = 77/148 (52%), Gaps = 3/148 (2%)

Query: 1   MKK--GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           M K     +M  A E+A+ AA + EIPVGAV V  NK+I    N    L D TAHAEI A
Sbjct: 1   MSKFSDEYWMQLAYEQAELAAKQGEIPVGAVIVSQNKLIGAGFNAPIGLSDPTAHAEIQA 60

Query: 59  IRMGCRILSQEILP-EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFY 117
           IR  C  L    LP +  LYVTLEPCTMC  A+  ARI+ + +G + PK G + +  Q  
Sbjct: 61  IRAACESLKNYRLPEDATLYVTLEPCTMCVGALVHARIKHVVFGTTEPKAGSLVSARQLL 120

Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDFF 145
                +H      G   ++  Q +  FF
Sbjct: 121 ENGYYNHKFTFEHGCLHEKCAQQLSLFF 148


>gi|258645306|ref|ZP_05732775.1| zinc-binding domain protein [Dialister invisus DSM 15470]
 gi|260402655|gb|EEW96202.1| zinc-binding domain protein [Dialister invisus DSM 15470]
          Length = 151

 Score =  191 bits (487), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 55/147 (37%), Positives = 84/147 (57%), Gaps = 1/147 (0%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
               +MS A++EA+ A    EIP+GA+ VL++ +I+ A N+     D TAHAEILAI+  
Sbjct: 2   NHYDYMSLAMQEAKKALTSREIPIGAIIVLHDSVIAAAHNQCENRSDPTAHAEILAIKKA 61

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
             IL    L    LYVT+EPC MCA A   A +  + YGA NP  GGI++  +       
Sbjct: 62  SAILGNWRLTGCSLYVTIEPCPMCAGAAVNAHLSSIIYGAPNPWYGGIDSKFRIVQNP-F 120

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H+  +  G+ +   +Q++ +FF ++R
Sbjct: 121 NHAVSVIRGVCQSECQQLMDEFFDDKR 147


>gi|332851789|ref|ZP_08433714.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Acinetobacter baumannii 6013150]
 gi|332865831|ref|ZP_08436615.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Acinetobacter baumannii 6013113]
 gi|332729796|gb|EGJ61131.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Acinetobacter baumannii 6013150]
 gi|332735043|gb|EGJ66128.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Acinetobacter baumannii 6013113]
          Length = 170

 Score =  191 bits (487), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 60/148 (40%), Positives = 77/148 (52%), Gaps = 3/148 (2%)

Query: 1   MKK--GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           M K     +M  A E+A+ AA + EIPVGAV V  NK+I    N    L D TAHAEI A
Sbjct: 1   MSKFSDEYWMQLAYEQAELAAEQGEIPVGAVIVSQNKLIGAGFNAPIGLSDPTAHAEIQA 60

Query: 59  IRMGCRILSQEILP-EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFY 117
           IR  C  L    LP +  LYVTLEPCTMC  A+  ARI+ + +G + PK G + +  Q  
Sbjct: 61  IRAACESLKNYRLPEDATLYVTLEPCTMCVGALVHARIKHVVFGTTEPKAGSLVSARQLL 120

Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDFF 145
                +H      G   ++  Q +  FF
Sbjct: 121 ENGYYNHKFTFEHGCLHEKCAQQLSLFF 148


>gi|260555185|ref|ZP_05827406.1| cytosine/adenosine deaminase [Acinetobacter baumannii ATCC 19606]
 gi|260411727|gb|EEX05024.1| cytosine/adenosine deaminase [Acinetobacter baumannii ATCC 19606]
          Length = 167

 Score =  191 bits (487), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 60/148 (40%), Positives = 77/148 (52%), Gaps = 3/148 (2%)

Query: 1   MKK--GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           M K     +M  A E+A+ AA + EIPVGAV V  NK+I    N    L D TAHAEI A
Sbjct: 1   MSKFSDEYWMQLAYEQAELAAEQGEIPVGAVIVSQNKLIGAGFNAPIGLSDPTAHAEIQA 60

Query: 59  IRMGCRILSQEILP-EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFY 117
           IR  C  L    LP +  LYVTLEPCTMC  A+  ARI+ + +G + PK G + +  Q  
Sbjct: 61  IRAACESLKNYRLPEDATLYVTLEPCTMCVGALVHARIKHVVFGTTEPKAGSLVSARQLL 120

Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDFF 145
                +H      G   ++  Q +  FF
Sbjct: 121 ENGYYNHKFTFEHGCLHEKCAQQLSLFF 148


>gi|88607031|ref|YP_504931.1| cytidine and deoxycytidylate deaminase family protein [Anaplasma
           phagocytophilum HZ]
 gi|88598094|gb|ABD43564.1| cytidine and deoxycytidylate deaminase family protein [Anaplasma
           phagocytophilum HZ]
          Length = 147

 Score =  191 bits (486), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 76/145 (52%), Positives = 97/145 (66%), Gaps = 4/145 (2%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           + +M  A+EEA ++    EIPVGA+ V N  II++A N   +  D TAHAEI+AIRM C+
Sbjct: 4   SAYMKIAMEEANSS--SGEIPVGALVVRNGVIIAKAHNLTIQNTDPTAHAEIVAIRMACK 61

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
            LS  IL   D+YVTLEPC MC  AISLARIRR+Y+GA N K GGIENG Q      C H
Sbjct: 62  ALSTHILDGCDIYVTLEPCAMCTQAISLARIRRIYFGACNEKLGGIENGAQVL--KYCLH 119

Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149
            PE+Y G  EQ + ++++ FFK+ R
Sbjct: 120 VPEVYGGFLEQENAELLKAFFKKMR 144


>gi|107103282|ref|ZP_01367200.1| hypothetical protein PaerPA_01004351 [Pseudomonas aeruginosa PACS2]
          Length = 182

 Score =  191 bits (486), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 61/148 (41%), Positives = 82/148 (55%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
            +   FM  AL EA+ AA   E+PVGAV V   +II R  NR     D +AHAE+LAIRM
Sbjct: 26  SRDPHFMREALAEAEKAAALGEVPVGAVLVREGEIIGRGFNRPISSHDPSAHAEMLAIRM 85

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
                    LP   LYVTLEPC+MC+  +  ARI+RL YG   PK G +E+  +F+    
Sbjct: 86  AAAEAGNYRLPGSTLYVTLEPCSMCSGLLVHARIQRLVYGTVEPKSGAVESRGRFFEQEH 145

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H   +  G+  +   Q++  FF+ RR
Sbjct: 146 LNHRVMVEGGVLAEECSQVLSAFFRARR 173


>gi|289669069|ref|ZP_06490144.1| hypothetical protein XcampmN_11383 [Xanthomonas campestris pv.
           musacearum NCPPB4381]
          Length = 174

 Score =  191 bits (486), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 50/148 (33%), Positives = 74/148 (50%), Gaps = 2/148 (1%)

Query: 4   GNVFMSCALEEAQNA-ALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRM 61
              +M  AL  A+ A    +EIPVGA+ V     ++    N N    D +AHAEI+A+R 
Sbjct: 20  DLHWMQHALHLAERAERDYDEIPVGALVVDAEGNVLGEGWNFNIASHDPSAHAEIVAMRE 79

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
             R L+   L    LYVTLEPC MCA A+  ARI R+ + AS+PK G   +         
Sbjct: 80  AGRRLANHRLIGCTLYVTLEPCAMCAMAMIHARIARVVFAASDPKTGACGSVFDLLADPR 139

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H   +  G+    +   + ++F+ +R
Sbjct: 140 HNHHVRVSGGVLAAEASLRLTNYFRAKR 167


>gi|66044515|ref|YP_234356.1| cytidine/deoxycytidylate deaminase, zinc-binding region
           [Pseudomonas syringae pv. syringae B728a]
 gi|63255222|gb|AAY36318.1| Cytidine/deoxycytidylate deaminase, zinc-binding region
           [Pseudomonas syringae pv. syringae B728a]
          Length = 169

 Score =  191 bits (486), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 60/148 (40%), Positives = 82/148 (55%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
            K   FM  AL  A   AL  E+PVGAV V N +II R  N      D +AHAE++AIR 
Sbjct: 10  SKDQDFMREALALAAQGALLGEVPVGAVVVQNGEIIGRGYNCPISGSDPSAHAEMVAIRD 69

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
             + L    LP   LYVTLEPC+MCA  I  +R+ R+ YGA  PK G +++  QF++ A 
Sbjct: 70  AAKALDNYRLPGSTLYVTLEPCSMCAGLIVHSRVARVVYGALEPKAGIVQSQGQFFSQAF 129

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H      G+  +    ++ +FF+ RR
Sbjct: 130 LNHRVLFEGGVLGEECGTMLSEFFRMRR 157


>gi|197124086|ref|YP_002136037.1| CMP/dCMP deaminase zinc-binding [Anaeromyxobacter sp. K]
 gi|196173935|gb|ACG74908.1| CMP/dCMP deaminase zinc-binding [Anaeromyxobacter sp. K]
          Length = 183

 Score =  191 bits (486), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 57/138 (41%), Positives = 79/138 (57%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  AL  A+ AA R E+PVGAVA+   +++ R  N     +D TAHAE+LAI+   R L 
Sbjct: 30  MQEALGLAREAAARGEVPVGAVALFEGRVVGRGANAREAARDPTAHAELLAIQEAARTLG 89

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
           +  L  V + VTLEPC MCA A+ LARI RL YGAS+PK G   +          +H   
Sbjct: 90  RWRLTGVTVVVTLEPCAMCAGAMVLARIDRLVYGASDPKAGCTGSLQDLSADPRLNHRFP 149

Query: 128 IYPGISEQRSRQIIQDFF 145
           +  G+  + S ++++ FF
Sbjct: 150 VERGLLAEESGELLRAFF 167


>gi|294669183|ref|ZP_06734263.1| tRNA-specific adenosine deaminase [Neisseria elongata subsp.
           glycolytica ATCC 29315]
 gi|291308815|gb|EFE50058.1| tRNA-specific adenosine deaminase [Neisseria elongata subsp.
           glycolytica ATCC 29315]
          Length = 246

 Score =  191 bits (486), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 53/143 (37%), Positives = 82/143 (57%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  AL +A+ AA   E+PVGAV V N +++S A NR     D+ +HAE+ A+    R  
Sbjct: 95  FMQLALHQAEAAAAAGEVPVGAVVVRNGEVLSTAHNRCVADCDIGSHAELRALAEAGRQT 154

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L   D+Y+TLEPC MCA+A+  AR+ R+ YGA+ PK G   +    ++    +   
Sbjct: 155 GSYRLDGCDVYITLEPCAMCASALIQARVARVVYGAAEPKSGAAGSVVDLFSDGRLNKHT 214

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
            ++ GI  +  + ++Q FF++RR
Sbjct: 215 AVFGGILAEDCQAVLQHFFRQRR 237


>gi|193215821|ref|YP_001997020.1| CMP/dCMP deaminase [Chloroherpeton thalassium ATCC 35110]
 gi|193089298|gb|ACF14573.1| CMP/dCMP deaminase zinc-binding [Chloroherpeton thalassium ATCC
           35110]
          Length = 161

 Score =  191 bits (486), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 52/143 (36%), Positives = 79/143 (55%), Gaps = 1/143 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  A  EA+ A  +NE+PVGAV    N  I+ R  N+   L D TAHAE++A+      L
Sbjct: 12  MEMAFREAEKAFEKNEVPVGAVVFDSNGAIVGRGFNQVEMLCDTTAHAEMIALTSAMNTL 71

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
             + L +  L VT+EPC MCA A+  A++ RL +G+ + K G         T    +H  
Sbjct: 72  GDKYLTDCTLAVTMEPCPMCAGAMVNAKLGRLIFGSYDAKMGAAGTVFNLTTSKFLNHQM 131

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+  GI E+++ +I++ FF ++R
Sbjct: 132 EVIGGILEEKTTEILKSFFAQKR 154


>gi|289677917|ref|ZP_06498807.1| cytidine/deoxycytidylate deaminase, zinc-binding region
           [Pseudomonas syringae pv. syringae FF5]
 gi|330895911|gb|EGH28196.1| cytidine/deoxycytidylate deaminase, zinc-binding region
           [Pseudomonas syringae pv. japonica str. M301072PT]
          Length = 170

 Score =  191 bits (486), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 59/148 (39%), Positives = 81/148 (54%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
                FM  AL  A   AL  E+PVGAV V N +II R  N      D +AHAE++AIR 
Sbjct: 11  SNDQYFMREALALAAQGALLGEVPVGAVVVQNGEIIGRGYNCPISGSDPSAHAEMVAIRD 70

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
             + L    LP   LYVTLEPC+MCA  I  +R+ R+ YGA  PK G +++  QF++ A 
Sbjct: 71  AAKALDNYRLPGSTLYVTLEPCSMCAGLIVHSRVARVVYGALEPKAGIVQSQGQFFSQAF 130

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H      G+  +    ++ +FF+ RR
Sbjct: 131 LNHRVLFEGGVLGEECGTMLSEFFRMRR 158


>gi|71736711|ref|YP_273597.1| cytidine/deoxycytidylate deaminase family protein [Pseudomonas
           syringae pv. phaseolicola 1448A]
 gi|289625949|ref|ZP_06458903.1| cytidine/deoxycytidylate deaminase family protein [Pseudomonas
           syringae pv. aesculi str. NCPPB3681]
 gi|289647891|ref|ZP_06479234.1| cytidine/deoxycytidylate deaminase family protein [Pseudomonas
           syringae pv. aesculi str. 2250]
 gi|71557264|gb|AAZ36475.1| cytidine/deoxycytidylate deaminase family protein [Pseudomonas
           syringae pv. phaseolicola 1448A]
 gi|320323193|gb|EFW79282.1| cytidine/deoxycytidylate deaminase family protein [Pseudomonas
           syringae pv. glycinea str. B076]
 gi|320329536|gb|EFW85525.1| cytidine/deoxycytidylate deaminase family protein [Pseudomonas
           syringae pv. glycinea str. race 4]
 gi|330867510|gb|EGH02219.1| cytidine/deoxycytidylate deaminase family protein [Pseudomonas
           syringae pv. aesculi str. 0893_23]
 gi|330874802|gb|EGH08951.1| cytidine/deoxycytidylate deaminase family protein [Pseudomonas
           syringae pv. glycinea str. race 4]
          Length = 169

 Score =  191 bits (486), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 60/148 (40%), Positives = 81/148 (54%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
            K   FM  AL  A   AL  E+PVGAV V N +II R  N      D +AHAE++AIR 
Sbjct: 10  SKDQDFMREALALAAQGALLGEVPVGAVVVQNGEIIGRGYNCPISASDPSAHAEMVAIRD 69

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
             R L    LP   LYVTLEPC+MCA  I  +R+ R+ YGA  PK G +++  QF++   
Sbjct: 70  AARALDNYRLPGSTLYVTLEPCSMCAGLIVHSRVARVVYGALEPKAGIVQSQGQFFSQGF 129

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H      G+  +    ++ +FF+ RR
Sbjct: 130 LNHRVLFEGGVLSEECGAMLSEFFRMRR 157


>gi|298373649|ref|ZP_06983638.1| tRNA-specific adenosine deaminase [Bacteroidetes oral taxon 274
           str. F0058]
 gi|298274701|gb|EFI16253.1| tRNA-specific adenosine deaminase [Bacteroidetes oral taxon 274
           str. F0058]
          Length = 143

 Score =  191 bits (486), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 57/147 (38%), Positives = 76/147 (51%), Gaps = 5/147 (3%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
               FM  AL EA  A    E+P+GAV V    II++A N    L DVTAHAE+ A+ M 
Sbjct: 2   TDVYFMQQALREAAYAFDEGEVPIGAVVVCAGNIIAKAHNLTERLNDVTAHAEMQAVTMA 61

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
              L  + L +  LYVTLEPC MCA A++ A I R+ +GA + K G        +     
Sbjct: 62  ANYLGGKYLNDCTLYVTLEPCVMCAGALAWAHIGRVVFGAYDDKRG-----FGRFAPKAL 116

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           H   E+  G+  Q   +I+Q FF  +R
Sbjct: 117 HTKTELVGGVMAQECGEILQRFFSTKR 143


>gi|219684000|ref|YP_002470383.1| cytidine and deoxycytidylate deaminase [Bifidobacterium animalis
           subsp. lactis AD011]
 gi|219621650|gb|ACL29807.1| possible cytidine and deoxycytidylate deaminase [Bifidobacterium
           animalis subsp. lactis AD011]
          Length = 152

 Score =  191 bits (486), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 50/150 (33%), Positives = 73/150 (48%), Gaps = 1/150 (0%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAI 59
           M +    M  AL +A+ A    ++PVGAV +  + ++I R  N      D  AHAEI+A+
Sbjct: 1   MTQYAEAMGEALAQARMARSAGDVPVGAVVLDAHGEVIGRGRNLRERDADPLAHAEIVAM 60

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
           R    +     L +  L VTLEPC MCA A    RI R+ +G  + K G   +       
Sbjct: 61  REAAAVRGNWNLADCTLVVTLEPCPMCAGACLQTRIGRIVFGGWDAKLGACGSVWDIPRD 120

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
               H PE+Y G+ E+    ++ +FF  RR
Sbjct: 121 PHVGHEPEVYGGVCERECTALLAEFFHSRR 150


>gi|104774442|ref|YP_619422.1| cytosine/adenosine deaminase [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC 11842]
 gi|116514541|ref|YP_813447.1| cytosine/adenosine deaminase [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC BAA-365]
 gi|103423523|emb|CAI98425.1| Cytosine/adenosine deaminase [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC 11842]
 gi|116093856|gb|ABJ59009.1| tRNA-adenosine deaminase [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC BAA-365]
 gi|325126252|gb|ADY85582.1| Cytidine-deoxycytidylate deaminase [Lactobacillus delbrueckii
           subsp. bulgaricus 2038]
          Length = 169

 Score =  191 bits (486), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 52/130 (40%), Positives = 84/130 (64%), Gaps = 1/130 (0%)

Query: 21  RNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVT 79
           ++E+P+GAV V  + +II R  NR    +D TAHAEILAI+  C+ L    L + +L+VT
Sbjct: 24  QDEVPIGAVVVGPDGQIIGRGYNRRELDEDGTAHAEILAIKEACQKLDSWRLIDCNLFVT 83

Query: 80  LEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139
           LEPC MCA AI  +RI+ +Y+ A +PK G   +    +++   +H P++  G+ +++  Q
Sbjct: 84  LEPCAMCAGAIINSRIKEVYFAAMDPKAGAAGSVVDLFSVEKFNHHPKVIRGLYKEQGAQ 143

Query: 140 IIQDFFKERR 149
           +++DFF+E R
Sbjct: 144 LLKDFFREIR 153


>gi|152112361|sp|Q1RGK7|Y1426_RICBR RecName: Full=Uncharacterized deaminase RBE_1426
          Length = 145

 Score =  190 bits (485), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 68/144 (47%), Positives = 97/144 (67%), Gaps = 2/144 (1%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVL--NNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M  AL++A+ A  +NE+PVGAV V   N KIIS++ N   E  +   HAEI+AI   CRI
Sbjct: 1   MREALKQAEIAFSKNEVPVGAVIVDRENQKIISKSYNNTEEKNNALYHAEIIAINEACRI 60

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           +S + L + D+YVTLEPC MCAAAI+ +R++RL+YGAS+ K G +E+  +++    C H 
Sbjct: 61  ISSKNLSDYDIYVTLEPCAMCAAAIAHSRLKRLFYGASDSKHGAVESNLRYFNSKACFHR 120

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
           PEIY GI  + S  +++ FFK+ R
Sbjct: 121 PEIYSGIFAEDSALLMKGFFKKIR 144


>gi|159035903|ref|YP_001535156.1| CMP/dCMP deaminase zinc-binding [Salinispora arenicola CNS-205]
 gi|157914738|gb|ABV96165.1| CMP/dCMP deaminase zinc-binding [Salinispora arenicola CNS-205]
          Length = 165

 Score =  190 bits (485), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 51/151 (33%), Positives = 77/151 (50%), Gaps = 6/151 (3%)

Query: 2   KKGNVFMSCALEEAQNAAL-----RNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAE 55
           ++  ++M  ALE A   A       ++IPVGAV +  +   ++   N      D TAHAE
Sbjct: 15  QRHELWMRRALEVAVTGADPTVTVVDDIPVGAVLLGPDGTELATGRNERELTGDPTAHAE 74

Query: 56  ILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
           +LA+R     L +  L    L VTLEPCTMCA A+ LAR+  + +GA  PK G   +   
Sbjct: 75  VLALRRAAGRLGRWRLDGCTLVVTLEPCTMCAGALVLARVSTVVFGAWEPKTGAAGSLWD 134

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
                  +H PE+Y G+    +  +++ FF+
Sbjct: 135 VLRDRRLNHRPEVYGGVLATETAAVLRAFFR 165


>gi|148359260|ref|YP_001250467.1| deaminase [Legionella pneumophila str. Corby]
 gi|296107307|ref|YP_003619007.1| Cytosine/adenosine deaminase [Legionella pneumophila 2300/99 Alcoy]
 gi|148281033|gb|ABQ55121.1| deaminase [Legionella pneumophila str. Corby]
 gi|295649208|gb|ADG25055.1| Cytosine/adenosine deaminase [Legionella pneumophila 2300/99 Alcoy]
          Length = 147

 Score =  190 bits (485), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 53/147 (36%), Positives = 74/147 (50%), Gaps = 3/147 (2%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
              +M  A E+A  A    E+PVGAV V  +N+++    N   +  D + HAEI AIR  
Sbjct: 3   DKFWMQLAYEQAVIARNEGEVPVGAVLVSKDNQLLGVGRNVIEKSHDPSDHAEIRAIRQA 62

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
            R L+   L +  LYVTLEPC MCA  +  ARI+RL +   + K G   +          
Sbjct: 63  SRKLNNHRLLDTTLYVTLEPCVMCAGLMVHARIKRLVFATRDFKAGAAGSMFNVL--HAL 120

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +HS  I  GI +    Q++ DFF+  R
Sbjct: 121 NHSVLIDEGIMQAECSQLLSDFFRNLR 147


>gi|295676796|ref|YP_003605320.1| CMP/dCMP deaminase zinc-binding protein [Burkholderia sp. CCGE1002]
 gi|295436639|gb|ADG15809.1| CMP/dCMP deaminase zinc-binding protein [Burkholderia sp. CCGE1002]
          Length = 249

 Score =  190 bits (485), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 45/122 (36%), Positives = 66/122 (54%)

Query: 24  IPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83
           +PVGAV V  +++I+   N      D +AHAE++A+R   + L    LP  +LYVTLEPC
Sbjct: 79  VPVGAVLVRGDEVIATGFNHPIGAHDPSAHAEMVALRAAAQSLENYRLPGCELYVTLEPC 138

Query: 84  TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQD 143
            MCA AI  ARI R+ +GA +PK G   +    +     +H   +  G+ E      ++ 
Sbjct: 139 LMCAGAIMHARIARVVFGARDPKTGACGSVVDAFANPRLNHHTTVSGGVLEAECGAALRS 198

Query: 144 FF 145
           FF
Sbjct: 199 FF 200


>gi|330975928|gb|EGH75994.1| cytidine/deoxycytidylate deaminase, zinc-binding region
           [Pseudomonas syringae pv. aptata str. DSM 50252]
          Length = 169

 Score =  190 bits (485), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 59/148 (39%), Positives = 81/148 (54%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
                FM  AL  A   AL  E+PVGAV V N +II R  N      D +AHAE++AIR 
Sbjct: 10  SNDRYFMREALALAAQGALLGEVPVGAVVVQNGEIIGRGYNCPISGSDPSAHAEMVAIRD 69

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
             + L    LP   LYVTLEPC+MCA  I  +R+ R+ YGA  PK G +++  QF++ A 
Sbjct: 70  AAKALDNYRLPGSTLYVTLEPCSMCAGLIVHSRVARVVYGALEPKAGIVQSQGQFFSQAF 129

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H      G+  +    ++ +FF+ RR
Sbjct: 130 LNHRVVFEGGVLGEECGTMLSEFFRMRR 157


>gi|199599026|ref|ZP_03212433.1| Cytosine/adenosine deaminase [Lactobacillus rhamnosus HN001]
 gi|199590062|gb|EDY98161.1| Cytosine/adenosine deaminase [Lactobacillus rhamnosus HN001]
          Length = 170

 Score =  190 bits (485), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 61/145 (42%), Positives = 81/145 (55%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           N +MS AL EA+ AA   E+P+GAV V + +II R  N     +D T HAEILAI+  CR
Sbjct: 9   NQYMSAALAEAKKAAAIGEVPIGAVVVHDQQIIGRGYNLRETTQDATQHAEILAIQAACR 68

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
            L    L +  L+VTLEPC MCA A+  ARI   Y+GA++PK G              +H
Sbjct: 69  QLGTWRLEDCSLFVTLEPCPMCAGAMINARIATCYFGATDPKAGVAGTFYNLLEDTRFNH 128

Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149
              + PGI    S  ++Q+FF+  R
Sbjct: 129 QVAVVPGIQATASAALLQEFFRAIR 153


>gi|270284659|ref|ZP_05966459.2| cytidine/deoxycytidylate deaminase family protein [Bifidobacterium
           gallicum DSM 20093]
 gi|270276606|gb|EFA22460.1| cytidine/deoxycytidylate deaminase family protein [Bifidobacterium
           gallicum DSM 20093]
          Length = 170

 Score =  190 bits (485), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 46/142 (32%), Positives = 64/142 (45%), Gaps = 1/142 (0%)

Query: 8   MSCALEEAQNAALRNEIPVG-AVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  A+ +A  A    ++P+G  V     ++I R  N      D  AHAEI A+R     L
Sbjct: 28  MESAIAQALQAKQHGDVPIGACVLDAGGRVIGRGHNMRERNLDPLAHAEIEAMREAAATL 87

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  L VTLEPC MCA A     + R+ +GA + K G   +             P
Sbjct: 88  GSWNLEDCTLVVTLEPCPMCAGACLQTHVGRIVFGAWDAKLGACGSVWDLPRDPHIGAHP 147

Query: 127 EIYPGISEQRSRQIIQDFFKER 148
           E+Y GI E    Q++  FF+ R
Sbjct: 148 EVYGGIRESECAQLLTAFFRLR 169


>gi|254502430|ref|ZP_05114581.1| Cytidine and deoxycytidylate deaminase zinc-binding region domain
           protein [Labrenzia alexandrii DFL-11]
 gi|222438501|gb|EEE45180.1| Cytidine and deoxycytidylate deaminase zinc-binding region domain
           protein [Labrenzia alexandrii DFL-11]
          Length = 155

 Score =  190 bits (485), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 74/129 (57%), Positives = 94/129 (72%)

Query: 21  RNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80
           R E+PVGAV V N +I++R GNR  EL D TAHAE+L IR  C  L  + LP+ DLYVTL
Sbjct: 27  RGEVPVGAVLVRNGEIVARDGNRTLELNDPTAHAEVLVIRAACAALQSQRLPKCDLYVTL 86

Query: 81  EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140
           EPC MCA AIS ARIRRLYYGA + KGG +++GT+F+    CHH+PE Y GI E++S  +
Sbjct: 87  EPCAMCAGAISFARIRRLYYGAGDEKGGAVDHGTRFFHQPICHHAPETYAGIGERQSAAL 146

Query: 141 IQDFFKERR 149
           ++ FF+ RR
Sbjct: 147 LKAFFQGRR 155


>gi|325917446|ref|ZP_08179655.1| tRNA-adenosine deaminase [Xanthomonas vesicatoria ATCC 35937]
 gi|325536320|gb|EGD08107.1| tRNA-adenosine deaminase [Xanthomonas vesicatoria ATCC 35937]
          Length = 171

 Score =  190 bits (485), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 51/148 (34%), Positives = 77/148 (52%), Gaps = 2/148 (1%)

Query: 4   GNVFMSCALEEAQNA-ALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRM 61
              +M  AL+ A+ A    +EIPVGAV +    +++    N N    D +AHAEI+A+R 
Sbjct: 17  DTHWMQHALQLAERAERDYDEIPVGAVLIDAEGQVLGEGWNYNIASHDPSAHAEIMAMRE 76

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
           G R L+   L    LYVTLEPC MCA A+  ARI R+ + AS+PK G   +         
Sbjct: 77  GGRRLANHRLIGCTLYVTLEPCAMCAMAMIHARIARVVFAASDPKTGACGSVFDLLADPR 136

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H   +  G+    +   + ++F+ +R
Sbjct: 137 HNHRVHVAGGVLAAEASLRLTNYFRAKR 164


>gi|158522041|ref|YP_001529911.1| CMP/dCMP deaminase zinc-binding [Desulfococcus oleovorans Hxd3]
 gi|158510867|gb|ABW67834.1| CMP/dCMP deaminase zinc-binding [Desulfococcus oleovorans Hxd3]
          Length = 146

 Score =  190 bits (485), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 58/143 (40%), Positives = 79/143 (55%), Gaps = 1/143 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  AL EA  A   +E+PVGAV V  + K++S   NR     D +AHAE+L IR   R  
Sbjct: 1   MELALVEAGKARDMDEVPVGAVLVSPDGKVLSADHNRPIAECDPSAHAEMLVIRRAARQA 60

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
           +   LP   LYVT+EPC MC  A+  ARI  + +G  +PK G   +   F   +  +HSP
Sbjct: 61  ANYRLPNTTLYVTVEPCVMCMGAVIHARIGTVVFGVHDPKWGAAGSLYDFTKHSALNHSP 120

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
            +  G+ E   R I+Q FF++RR
Sbjct: 121 AVVAGVCEDACRSILQAFFEQRR 143


>gi|313124289|ref|YP_004034548.1| nucleoside deaminase [Lactobacillus delbrueckii subsp. bulgaricus
           ND02]
 gi|312280852|gb|ADQ61571.1| Nucleoside deaminase [Lactobacillus delbrueckii subsp. bulgaricus
           ND02]
          Length = 169

 Score =  190 bits (485), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 52/130 (40%), Positives = 82/130 (63%), Gaps = 1/130 (0%)

Query: 21  RNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVT 79
           ++E+P+GAV V  + +II R  NR    +D TAHAEILAI+  C+ L    L +  L+VT
Sbjct: 24  QDEVPIGAVVVGPDGQIIGRGYNRRELDEDGTAHAEILAIKEACQKLDSWRLIDCSLFVT 83

Query: 80  LEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139
           LEPC MCA AI  +RI+ +Y+ A +PK G   +    +++   +H PE+  G+ +++   
Sbjct: 84  LEPCAMCAGAIINSRIKEVYFAAMDPKAGAAGSVVDLFSVEKFNHHPEVIRGLYKEQGAL 143

Query: 140 IIQDFFKERR 149
           +++DFF+E R
Sbjct: 144 LLKDFFREIR 153


>gi|311745177|ref|ZP_07718962.1| cytidine/deoxycytidylate deaminase family protein [Algoriphagus sp.
           PR1]
 gi|311302345|gb|EAZ81919.2| cytidine/deoxycytidylate deaminase family protein [Algoriphagus sp.
           PR1]
          Length = 147

 Score =  190 bits (485), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 60/145 (41%), Positives = 88/145 (60%), Gaps = 5/145 (3%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
             +M+ AL++A+ A    EIPVGAV VL N+II+RA N+  +L DVTAHAE+LAI     
Sbjct: 7   EYYMNEALKQAKIAFEEGEIPVGAVIVLKNRIIARAYNQTEKLNDVTAHAEMLAITSAAN 66

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
            +  + L +  LYVTLEPCTMCA A+  ++I  ++Y A + K G  ++  +       H 
Sbjct: 67  YMGAKYLNDCKLYVTLEPCTMCAGALFWSQIGEVHYAAQDEKRGYRKSNPEI-----LHP 121

Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149
             +++ G   + S Q+I DFFK+ R
Sbjct: 122 KTKVFQGPFREESEQLILDFFKKLR 146


>gi|54297635|ref|YP_124004.1| hypothetical protein lpp1686 [Legionella pneumophila str. Paris]
 gi|53751420|emb|CAH12838.1| hypothetical protein lpp1686 [Legionella pneumophila str. Paris]
          Length = 149

 Score =  190 bits (484), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 53/147 (36%), Positives = 74/147 (50%), Gaps = 3/147 (2%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
              +M  A E+A  A    E+PVGAV V  +N+++    N   +  D + HAEI AIR  
Sbjct: 5   DKFWMQLAYEQAVIARNEGEVPVGAVLVSKDNQLLGVGRNVIEKSHDPSDHAEIRAIRQA 64

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
            R L+   L +  LYVTLEPC MCA  +  ARI+RL +   + K G   +          
Sbjct: 65  SRKLNNHRLLDTTLYVTLEPCVMCAGLMVHARIKRLVFATRDFKAGAAGSMFNVL--HAL 122

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +HS  I  GI +    Q++ DFF+  R
Sbjct: 123 NHSVLIDEGIMQAECSQLLSDFFRNLR 149


>gi|149200864|ref|ZP_01877839.1| hypothetical protein RTM1035_14602 [Roseovarius sp. TM1035]
 gi|149145197|gb|EDM33223.1| hypothetical protein RTM1035_14602 [Roseovarius sp. TM1035]
          Length = 153

 Score =  190 bits (484), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 80/144 (55%), Positives = 100/144 (69%), Gaps = 1/144 (0%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           +M  AL+EA+ AA R E+PVGAV V     I +RAGNR REL D TAHAEILAIR  C  
Sbjct: 6   YMDIALDEARAAAARGEVPVGAVIVTPSGAIAARAGNRTRELSDPTAHAEILAIRAACAA 65

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           L  E LP  DLYVTLEPC MCA+AI+  RI RLYYGA++PK GG+  G + ++   CHH 
Sbjct: 66  LGSERLPGHDLYVTLEPCAMCASAIAATRIARLYYGAADPKSGGVAMGARVFSHPQCHHV 125

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
           PEIY GI+   +  +++ FF++RR
Sbjct: 126 PEIYDGIAATEAETLLKTFFRDRR 149


>gi|183602639|ref|ZP_02964003.1| possible cytidine and deoxycytidylate deaminase [Bifidobacterium
           animalis subsp. lactis HN019]
 gi|241191605|ref|YP_002968999.1| Cytosine/adenosine deaminase [Bifidobacterium animalis subsp.
           lactis Bl-04]
 gi|241197010|ref|YP_002970565.1| Cytosine/adenosine deaminase [Bifidobacterium animalis subsp.
           lactis DSM 10140]
 gi|183218057|gb|EDT88704.1| possible cytidine and deoxycytidylate deaminase [Bifidobacterium
           animalis subsp. lactis HN019]
 gi|240249997|gb|ACS46937.1| Cytosine/adenosine deaminase [Bifidobacterium animalis subsp.
           lactis Bl-04]
 gi|240251564|gb|ACS48503.1| Cytosine/adenosine deaminase [Bifidobacterium animalis subsp.
           lactis DSM 10140]
 gi|295794597|gb|ADG34132.1| Cytosine/adenosine deaminase [Bifidobacterium animalis subsp.
           lactis V9]
          Length = 169

 Score =  190 bits (484), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 50/150 (33%), Positives = 73/150 (48%), Gaps = 1/150 (0%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAI 59
           M +    M  AL +A+ A    ++PVGAV +  + ++I R  N      D  AHAEI+A+
Sbjct: 18  MTQYAEAMGEALAQARMARSAGDVPVGAVVLDAHGEVIGRGRNLRERDADPLAHAEIVAM 77

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
           R    +     L +  L VTLEPC MCA A    RI R+ +G  + K G   +       
Sbjct: 78  REAAAVRGNWNLADCTLVVTLEPCPMCAGACLQTRIGRIVFGGWDAKLGACGSVWDIPRD 137

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
               H PE+Y G+ E+    ++ +FF  RR
Sbjct: 138 PHVGHEPEVYGGVCERECTALLAEFFHSRR 167


>gi|149278271|ref|ZP_01884409.1| putative cytosine/adenosine deaminase [Pedobacter sp. BAL39]
 gi|149231037|gb|EDM36418.1| putative cytosine/adenosine deaminase [Pedobacter sp. BAL39]
          Length = 157

 Score =  190 bits (484), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 50/147 (34%), Positives = 75/147 (51%), Gaps = 5/147 (3%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
           +   +M  ALEEA  A +  E+P+GA+ V   +I+ R  N   +L DVTAHAE+ A    
Sbjct: 15  EDEHYMRLALEEANKAYVAEEVPIGAIVVCKGRIVGRGYNLTEQLNDVTAHAEMQAFTAA 74

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
            + L  + L +  +YVT+EPC MCA A    ++ RL YGA+ PK G    G +       
Sbjct: 75  AQTLGGKYLKDCTIYVTVEPCVMCAGASYWMQVGRLVYGATEPKRGFTSRGAKL-----L 129

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           H    +  G+  +    ++  FF  +R
Sbjct: 130 HPKTILKAGVLAEECGALMTRFFANKR 156


>gi|330969043|gb|EGH69109.1| cytidine/deoxycytidylate deaminase, zinc-binding region
           [Pseudomonas syringae pv. aceris str. M302273PT]
          Length = 169

 Score =  190 bits (484), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 59/148 (39%), Positives = 82/148 (55%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
            K   FM  AL  A   AL  E+PVGAV V N +I+ R  N      D +AHAE++AIR 
Sbjct: 10  SKDQYFMHEALALAAQGALLGEVPVGAVVVQNGEIVGRGYNCPISGSDPSAHAEMVAIRD 69

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
             + L    LP   LYVTLEPC+MCA  I  +R+ R+ YGA  PK G +++  QF++ A 
Sbjct: 70  AAKALDNYRLPGSTLYVTLEPCSMCAGLIVHSRVTRVVYGALEPKAGIVQSQGQFFSQAF 129

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H      G+  +    ++ +FF+ RR
Sbjct: 130 LNHRVLFEGGVLGEECGTMLSEFFRMRR 157


>gi|325292072|ref|YP_004277936.1| cytidine and deoxycytidylate deaminase [Agrobacterium sp. H13-3]
 gi|325059925|gb|ADY63616.1| cytidine and deoxycytidylate deaminase [Agrobacterium sp. H13-3]
          Length = 152

 Score =  190 bits (484), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 87/149 (58%), Positives = 113/149 (75%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M +   FM  AL EA+ A  R E+P+GAV V++ ++I+R+GNR REL DVTAHAEI  IR
Sbjct: 1   MAERTHFMELALAEARAAGERQEVPIGAVLVMDGRVIARSGNRTRELNDVTAHAEIAVIR 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
           M C  L QE LP  DLYVTLEPCTMCAAAIS ARIRRLYYGA +PKGG + +G +F++  
Sbjct: 61  MACEALEQERLPGADLYVTLEPCTMCAAAISFARIRRLYYGAEDPKGGAVHSGVRFFSQP 120

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
           TCHH+P++Y G++E  S +I++ FF+E+R
Sbjct: 121 TCHHAPDVYSGLAESESAEILRKFFREKR 149


>gi|291542828|emb|CBL15938.1| tRNA-adenosine deaminase [Ruminococcus bromii L2-63]
          Length = 152

 Score =  190 bits (484), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 58/149 (38%), Positives = 84/149 (56%), Gaps = 1/149 (0%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M K   +M  A+E+A+ AA  NE+PVGAV V N++I++   NR  + K+   HAE  AI 
Sbjct: 1   MDKTLYYMQKAIEQAEIAAAENEVPVGAVIVRNDEIVATGRNRREQGKNALLHAETDAIY 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
             C+ L    L   ++YVTLEPC MCA AI  A I ++Y+GA + K G     T  + + 
Sbjct: 61  NACQKLGGWRLWNCEIYVTLEPCPMCAGAIINAHIPKVYFGAYDLKNGACGTITNLFQMP 120

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +  PE   GI ++   +++ DFFK  R
Sbjct: 121 -FNFKPESVGGIMQEECSKLLTDFFKNLR 148


>gi|296271485|ref|YP_003654117.1| CMP/dCMP deaminase zinc-binding protein [Thermobispora bispora DSM
           43833]
 gi|296094272|gb|ADG90224.1| CMP/dCMP deaminase zinc-binding protein [Thermobispora bispora DSM
           43833]
          Length = 152

 Score =  190 bits (484), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 58/151 (38%), Positives = 79/151 (52%), Gaps = 2/151 (1%)

Query: 1   MKKG-NVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILA 58
           M +     M  AL EA  A  R E+PVGAV +  +  +++ AGN      D TAHAE+LA
Sbjct: 1   MTQDYEPAMRLALAEAVRAGERGEVPVGAVVLGPDGTVLAAAGNDREASGDPTAHAEVLA 60

Query: 59  IRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
           +R   R L    L    L VTLEPCTMCA A  LAR+ R+ YGA++ K G   +      
Sbjct: 61  LRAAARALGTWRLSGCTLVVTLEPCTMCAGAAVLARVDRVVYGAADEKAGAAGSLWDVLR 120

Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
               +H PE+  G+  +    +++ FF  RR
Sbjct: 121 DRRLNHRPEVVLGVLAEECGAVLRSFFAGRR 151


>gi|320102361|ref|YP_004177952.1| tRNA-adenosine deaminase [Isosphaera pallida ATCC 43644]
 gi|319749643|gb|ADV61403.1| tRNA-adenosine deaminase [Isosphaera pallida ATCC 43644]
          Length = 185

 Score =  190 bits (484), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 48/139 (34%), Positives = 77/139 (55%), Gaps = 2/139 (1%)

Query: 5   NVF-MSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMG 62
           + + M+ AL+ A+ A    E+PVGAV +    +++++A N    L+D TAHAE L +   
Sbjct: 20  DYWAMTRALDLARAAVDLGEVPVGAVVLDPLGRLLAQAHNLRETLEDPTAHAERLVLTWA 79

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
            R L    L    LYVTLEPC MCA AI LAR+ R+ Y  ++PK G   +  +    +  
Sbjct: 80  ARGLGTWRLEGCTLYVTLEPCVMCAGAIVLARVARVVYATNDPKAGACSSLYRILDDSRL 139

Query: 123 HHSPEIYPGISEQRSRQII 141
           +H P++  G+  + +  ++
Sbjct: 140 NHRPQVEYGLFAREAGDLL 158


>gi|169633380|ref|YP_001707116.1| putative deaminase [Acinetobacter baumannii SDF]
 gi|169152172|emb|CAP01075.1| putative deaminase [Acinetobacter baumannii]
          Length = 166

 Score =  190 bits (484), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 60/148 (40%), Positives = 77/148 (52%), Gaps = 3/148 (2%)

Query: 1   MKK--GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           M K     +M  A E+A+ AA + EIPVGAV V  NK+I    N    L D TAHAEI A
Sbjct: 1   MSKFSDEYWMQLAYEQAELAAEQGEIPVGAVIVSQNKLIGAGFNAPIGLSDPTAHAEIQA 60

Query: 59  IRMGCRILSQEILP-EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFY 117
           IR  C  L    LP +  LYVTLEPCTMC  A+  ARI+ + +G + PK G + +  Q  
Sbjct: 61  IRAACESLKNYRLPEDATLYVTLEPCTMCVGALVHARIKHVVFGTTEPKAGSLVSARQLL 120

Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDFF 145
                +H      G   ++  Q +  FF
Sbjct: 121 ENGYYNHKFTFEHGCLHEKCAQQLSLFF 148


>gi|281358294|ref|ZP_06244776.1| CMP/dCMP deaminase zinc-binding [Victivallis vadensis ATCC BAA-548]
 gi|281315121|gb|EFA99152.1| CMP/dCMP deaminase zinc-binding [Victivallis vadensis ATCC BAA-548]
          Length = 434

 Score =  190 bits (484), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 51/150 (34%), Positives = 81/150 (54%), Gaps = 1/150 (0%)

Query: 1   MKK-GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
           M      FM  AL+EA+NAA   E+PVGAVAV + ++++ A NR  E     +HAEI  +
Sbjct: 1   MNDSDPAFMRLALDEARNAAAAGEVPVGAVAVRDGRVLATARNRVEERHSAVSHAEIELL 60

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
                +     + E+  Y+T EPC MCA A+  AR  R+ +G ++P+ GG  +       
Sbjct: 61  HAVEAVTGDWRMDEITFYITKEPCPMCAGALVNARAGRIVFGLADPRMGGCGSALDITGH 120

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
                 PE+  G+  + +++II++FF+  R
Sbjct: 121 PGVLWHPEVEGGVLAEEAQRIIREFFRNSR 150


>gi|297572271|ref|YP_003698045.1| CMP/dCMP deaminase zinc-binding protein [Arcanobacterium
           haemolyticum DSM 20595]
 gi|296932618|gb|ADH93426.1| CMP/dCMP deaminase zinc-binding protein [Arcanobacterium
           haemolyticum DSM 20595]
          Length = 143

 Score =  190 bits (484), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 52/143 (36%), Positives = 75/143 (52%), Gaps = 1/143 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  A+E A+ A    ++PVGAV +  +  +I R  N      D   HAE+ A+R   R L
Sbjct: 1   MHEAMEIARRAGADGDVPVGAVILGPDGGVIGRGWNTREADADPCGHAEVNALREAARAL 60

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
            +  L    L VTLEPCTMCA AI  +R+ R+ +GA + K G   +       A  +H  
Sbjct: 61  GRWNLSGCTLVVTLEPCTMCAGAIVNSRVSRVVFGAWDAKAGAAGSVRDVLRDARLNHVV 120

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+  G+ E  +  I+QD+F+ RR
Sbjct: 121 EVIGGLCEAENVAILQDWFEARR 143


>gi|293605714|ref|ZP_06688091.1| cytidine/deoxycytidylate deaminase [Achromobacter piechaudii ATCC
           43553]
 gi|292815893|gb|EFF74997.1| cytidine/deoxycytidylate deaminase [Achromobacter piechaudii ATCC
           43553]
          Length = 169

 Score =  190 bits (484), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 49/138 (35%), Positives = 73/138 (52%), Gaps = 1/138 (0%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           +   ++  AL+EAQ A    E+PVGA+ V    +I+ R  NR     D TAHAEI+A+R 
Sbjct: 16  EDARYIELALQEAQAAYEIGEVPVGALVVSAQGEILGRGYNRTIIDHDPTAHAEIVALRN 75

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
             R L    LP + +YVTLEPC MC  A+  AR+ R+ +GA +PK G   +     ++  
Sbjct: 76  AARRLENYRLPGITVYVTLEPCVMCIGAMLHARLARVVFGAYDPKTGACGSVLDVGSVPK 135

Query: 122 CHHSPEIYPGISEQRSRQ 139
            +H   +  G+  +    
Sbjct: 136 LNHHTSVTGGVLAEPCGD 153


>gi|298488260|ref|ZP_07006293.1| tRNA-specific adenosine-34 deaminase [Pseudomonas savastanoi pv.
           savastanoi NCPPB 3335]
 gi|298157199|gb|EFH98286.1| tRNA-specific adenosine-34 deaminase [Pseudomonas savastanoi pv.
           savastanoi NCPPB 3335]
          Length = 169

 Score =  190 bits (484), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 59/148 (39%), Positives = 80/148 (54%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
            K   FM  AL  A   AL  E+PVGAV V N +II R  N      D +AHAE++AIR 
Sbjct: 10  SKDQDFMREALALAAQGALLGEVPVGAVVVQNGEIIGRGYNCPISASDPSAHAEMVAIRD 69

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
             R L    L    LYVTLEPC+MCA  I  +R+ R+ YGA  PK G +++  QF++   
Sbjct: 70  AARALDNYRLSGSTLYVTLEPCSMCAGLIVHSRVARVVYGALEPKAGIVQSQGQFFSQGF 129

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H      G+  +    ++ +FF+ RR
Sbjct: 130 LNHRVLFEGGVLGEECGAMLSEFFRMRR 157


>gi|294813865|ref|ZP_06772508.1| cytidine/deoxycytidine deaminase [Streptomyces clavuligerus ATCC
           27064]
 gi|326442283|ref|ZP_08217017.1| deaminase [Streptomyces clavuligerus ATCC 27064]
 gi|294326464|gb|EFG08107.1| cytidine/deoxycytidine deaminase [Streptomyces clavuligerus ATCC
           27064]
          Length = 199

 Score =  190 bits (484), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 47/128 (36%), Positives = 70/128 (54%), Gaps = 1/128 (0%)

Query: 22  NEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80
            ++PVGAV +  +   ++   N      D TAHAE+LAIR   R +    L +  L VTL
Sbjct: 72  GDVPVGAVVLAADGTRLATGHNERELTGDPTAHAEVLAIRRAARRIGGWRLSDCTLVVTL 131

Query: 81  EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140
           EPCTMCA AI+ +R+ R+ YGA + K G + +          +H PE+  G+ E    ++
Sbjct: 132 EPCTMCAGAITQSRVGRVVYGARDEKAGAVGSLWDVVRDRRLNHRPEVIIGVLEPECARL 191

Query: 141 IQDFFKER 148
           + DFF+ R
Sbjct: 192 MTDFFRHR 199


>gi|134295996|ref|YP_001119731.1| tRNA-adenosine deaminase [Burkholderia vietnamiensis G4]
 gi|134139153|gb|ABO54896.1| tRNA-adenosine deaminase [Burkholderia vietnamiensis G4]
          Length = 197

 Score =  190 bits (483), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 53/143 (37%), Positives = 76/143 (53%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
           +   FM  A   A+ A    E+PVGAV V  +++I+R  N      D +AHAE+ A+RM 
Sbjct: 34  RDLHFMRLAQAAAEEARAAGEVPVGAVLVRGDEVIARGFNHPIGGHDPSAHAEMAALRMA 93

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
            + L    +P  +LYVTLEPC MCA AI  ARI R+ YGA++PK G   +    +     
Sbjct: 94  AQHLQNYRMPGCELYVTLEPCLMCAGAIMHARIARVVYGAADPKTGACGSVIDAFANPQL 153

Query: 123 HHSPEIYPGISEQRSRQIIQDFF 145
           +H  E+  G+        ++ FF
Sbjct: 154 NHHTEVTGGVLADECGAALKSFF 176


>gi|146283335|ref|YP_001173488.1| cytidine/deoxycytidylate deaminase [Pseudomonas stutzeri A1501]
 gi|145571540|gb|ABP80646.1| cytidine/deoxycytidylate deaminase [Pseudomonas stutzeri A1501]
          Length = 145

 Score =  190 bits (483), Expect = 7e-47,   Method: Composition-based stats.
 Identities = 49/127 (38%), Positives = 74/127 (58%)

Query: 23  EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEP 82
           E+PVGAV V   +I+ R  N      D +AHAE++AIR   + L    LP   LYVTLEP
Sbjct: 16  EVPVGAVLVHEGQIVGRGFNCPISRHDPSAHAEMVAIRAAAQALQNYRLPGSTLYVTLEP 75

Query: 83  CTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQ 142
           C+MCA  I  +R++R+ YGA+ PK G + +  QF+     +H   +  G+  +    ++ 
Sbjct: 76  CSMCAGLIVHSRVQRVVYGATEPKAGVVVSRGQFFDQGFLNHRVLVEGGVLAEECGAVLS 135

Query: 143 DFFKERR 149
           +FF++RR
Sbjct: 136 EFFRQRR 142


>gi|256827973|ref|YP_003156701.1| CMP/dCMP deaminase zinc-binding [Desulfomicrobium baculatum DSM
           4028]
 gi|256577149|gb|ACU88285.1| CMP/dCMP deaminase zinc-binding [Desulfomicrobium baculatum DSM
           4028]
          Length = 190

 Score =  190 bits (483), Expect = 7e-47,   Method: Composition-based stats.
 Identities = 55/146 (37%), Positives = 74/146 (50%), Gaps = 1/146 (0%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
             FM  AL+ A  A  R ++PVGAV V  N +I+ R  NR     D TAHAEILA+R   
Sbjct: 33  EPFMCEALQLAGLAEGRGDVPVGAVVVDGNGRILGRGENRTIFENDPTAHAEILALRQAG 92

Query: 64  RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123
             +    L +  L VTLEPC MC  A+  AR+  + Y A +PK G + +      L   +
Sbjct: 93  AKVGNHRLTDAVLVVTLEPCIMCLGAVIQARLAGVVYAAKDPKAGCLVSRMSGTELPWSN 152

Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149
           H      G+ EQ     +  FF++RR
Sbjct: 153 HHFWSLGGVLEQECSAKLSGFFQKRR 178


>gi|21231608|ref|NP_637525.1| hypothetical protein XCC2169 [Xanthomonas campestris pv. campestris
           str. ATCC 33913]
 gi|66768270|ref|YP_243032.1| hypothetical protein XC_1949 [Xanthomonas campestris pv. campestris
           str. 8004]
 gi|188991407|ref|YP_001903417.1| Putative cytidine / deoxycytidylate deaminase family protein
           [Xanthomonas campestris pv. campestris str. B100]
 gi|21113299|gb|AAM41449.1| conserved hypothetical protein [Xanthomonas campestris pv.
           campestris str. ATCC 33913]
 gi|66573602|gb|AAY49012.1| conserved hypothetical protein [Xanthomonas campestris pv.
           campestris str. 8004]
 gi|167733167|emb|CAP51365.1| Putative cytidine / deoxycytidylate deaminase family protein
           [Xanthomonas campestris pv. campestris]
          Length = 171

 Score =  190 bits (483), Expect = 7e-47,   Method: Composition-based stats.
 Identities = 52/148 (35%), Positives = 77/148 (52%), Gaps = 2/148 (1%)

Query: 4   GNVFMSCALEEAQNA-ALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRM 61
              +M+ AL  A+ A    +EIPVGAV V     ++    N N    D +AHAEI+A+R 
Sbjct: 17  DQQWMTHALRLAERAERDYDEIPVGAVLVDPTGALLGEGWNFNIASHDPSAHAEIMAMRE 76

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
           G R L+   L    LYVTLEPC MCA A+  ARI R+ + AS+PK G   +         
Sbjct: 77  GGRRLANHRLIGCTLYVTLEPCAMCAMAMIHARIARVVFAASDPKTGACGSVFDLLADPR 136

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H  ++  G+    +   + ++F+ +R
Sbjct: 137 HNHRVQVSGGVLAAEAGLRLTNYFRAKR 164


>gi|110636535|ref|YP_676742.1| cytosine/adenosine deaminase [Cytophaga hutchinsonii ATCC 33406]
 gi|110279216|gb|ABG57402.1| cytosine/adenosine deaminase [Cytophaga hutchinsonii ATCC 33406]
          Length = 148

 Score =  190 bits (483), Expect = 7e-47,   Method: Composition-based stats.
 Identities = 59/149 (39%), Positives = 83/149 (55%), Gaps = 5/149 (3%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +     FM  AL+EAQ A  + EIPVGAV V NN+IISRA N+   L DVTAHAE+LAI 
Sbjct: 4   IHSDEHFMREALKEAQKAFEKGEIPVGAVVVSNNQIISRAYNQTELLSDVTAHAEMLAIT 63

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
                L  + L +  L+VTLEPC MCA A++ ++I  + Y A + + G         +  
Sbjct: 64  AAANHLGGKYLSDCTLFVTLEPCVMCAGALTWSQIGNVVYAAKDIRRG-----YSTISGL 118

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             H    +  G   + S +++ DFF++ R
Sbjct: 119 KMHPKTRVCQGPFSEESEKLLLDFFRKLR 147


>gi|237800069|ref|ZP_04588530.1| cytidine/deoxycytidylate deaminase, zinc-binding region
           [Pseudomonas syringae pv. oryzae str. 1_6]
 gi|237806398|ref|ZP_04593102.1| cytidine/deoxycytidylate deaminase, zinc-binding region
           [Pseudomonas syringae pv. oryzae str. 1_6]
 gi|331022924|gb|EGI02981.1| cytidine/deoxycytidylate deaminase, zinc-binding region
           [Pseudomonas syringae pv. oryzae str. 1_6]
 gi|331027511|gb|EGI07566.1| cytidine/deoxycytidylate deaminase, zinc-binding region
           [Pseudomonas syringae pv. oryzae str. 1_6]
          Length = 168

 Score =  190 bits (483), Expect = 7e-47,   Method: Composition-based stats.
 Identities = 59/148 (39%), Positives = 81/148 (54%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
                FM  AL  A   AL  E+PVGAV V N +II R  N      D +AHAE++AIR 
Sbjct: 10  SNDQYFMREALALAAQGALLGEVPVGAVVVHNGEIIGRGYNCPISGSDPSAHAEMVAIRE 69

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
             + L    LP   LYVTLEPC+MCA  I  +R+ R+ YGA  PK G +++  QF++ A 
Sbjct: 70  SAKALDNYRLPGSTLYVTLEPCSMCAGLIVHSRVARVVYGALEPKAGIVQSQGQFFSQAF 129

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H      G+  +    ++ +FF+ RR
Sbjct: 130 LNHRVLFEGGVLGEECGAMLSEFFRMRR 157


>gi|320353809|ref|YP_004195148.1| tRNA-adenosine deaminase [Desulfobulbus propionicus DSM 2032]
 gi|320122311|gb|ADW17857.1| tRNA-adenosine deaminase [Desulfobulbus propionicus DSM 2032]
          Length = 146

 Score =  190 bits (483), Expect = 7e-47,   Method: Composition-based stats.
 Identities = 54/143 (37%), Positives = 82/143 (57%), Gaps = 1/143 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAV-AVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  AL +A+ AA   E+PVGAV       I++ AGN      D + HAE++ +R   +++
Sbjct: 4   MRRALVQARQAAEAGEVPVGAVAIDAQGAILAEAGNNCIGASDPSGHAEMVVLRRAAQVV 63

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               LP + LYVTLEPC MCAA +  ARI RL +GA++PKGG I +  +  +    +H  
Sbjct: 64  GNYRLPGLTLYVTLEPCPMCAALMVHARIARLVFGATDPKGGAIVSKYRIGSDGLLNHGF 123

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
            +  G+  +    +++DFF+ RR
Sbjct: 124 SVTGGVCAEECGNLLRDFFRGRR 146


>gi|227495664|ref|ZP_03925980.1| deaminase [Actinomyces coleocanis DSM 15436]
 gi|226830896|gb|EEH63279.1| deaminase [Actinomyces coleocanis DSM 15436]
          Length = 191

 Score =  190 bits (483), Expect = 7e-47,   Method: Composition-based stats.
 Identities = 45/145 (31%), Positives = 68/145 (46%), Gaps = 1/145 (0%)

Query: 6   VFMSCALEEAQNAALRNEIPVGAVAVLNN-KIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           VFM  A+  A  A    ++PVGA+ V    ++I+   N      D   HAE+  +R    
Sbjct: 47  VFMRQAMNLAAEAERAGDVPVGALLVSEGGEVIATGFNTREAACDPCGHAEVNVLRAAAA 106

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
            L     P   L VTLEPC MCA AI  AR+ R+ +GA +   G   +          +H
Sbjct: 107 KLGTWRFPSYTLVVTLEPCVMCAGAIVSARVGRVVFGAWDRAAGACGSLRDVVRDPRVNH 166

Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149
             E++ G+ E+     + +FF+ +R
Sbjct: 167 QVEVFSGVLEKECETQLLEFFQAKR 191


>gi|91783891|ref|YP_559097.1| tRNA-adenosine deaminase [Burkholderia xenovorans LB400]
 gi|91687845|gb|ABE31045.1| tRNA-adenosine deaminase [Burkholderia xenovorans LB400]
          Length = 196

 Score =  190 bits (483), Expect = 8e-47,   Method: Composition-based stats.
 Identities = 50/145 (34%), Positives = 78/145 (53%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +++   FM+ A   A+ A    E+PVGAV V  +++I++  N      D +AHAE++A+R
Sbjct: 20  LERDRRFMALAQAAAEEARAIGEVPVGAVLVRGDEVIAKGFNHPIGAHDPSAHAEMVALR 79

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              + +    LP  +LYVTLEPC MCA AI  ARI R+ +GA +PK G   +    +   
Sbjct: 80  AAAQAVENYRLPGCELYVTLEPCLMCAGAIMHARIARVVFGARDPKTGACGSVVDAFANP 139

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFF 145
             +H   +  G+ E      ++ FF
Sbjct: 140 QLNHHTTVTGGVLESECGAALKAFF 164


>gi|285018425|ref|YP_003376136.1| cytidine / deoxycytidylate deaminase [Xanthomonas albilineans GPE
           PC73]
 gi|283473643|emb|CBA16146.1| putative cytidine / deoxycytidylate deaminase protein [Xanthomonas
           albilineans]
          Length = 165

 Score =  190 bits (483), Expect = 8e-47,   Method: Composition-based stats.
 Identities = 51/149 (34%), Positives = 76/149 (51%), Gaps = 2/149 (1%)

Query: 3   KGNVFMSCALEEAQNAALR-NEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +   +M  AL  A+ A    +EIPVGAV V   + ++    N N    D +AHAEI+A+R
Sbjct: 10  RDERWMRHALALAERAEREFDEIPVGAVLVSAEDAVLGEGWNLNIAEHDPSAHAEIVALR 69

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              R L    LP   LYVTLEPC MCA A+  AR+  L Y A++PK G   +        
Sbjct: 70  QAGRRLGNHRLPGSTLYVTLEPCAMCAMALVHARVAELVYAAADPKTGACGSVFDLLGDP 129

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H  ++  G+    +   + ++F+ +R
Sbjct: 130 RHNHRVQVRGGVLAAAASVRLTNYFRAKR 158


>gi|206560408|ref|YP_002231172.1| putative deaminase [Burkholderia cenocepacia J2315]
 gi|198036449|emb|CAR52345.1| putative deaminase [Burkholderia cenocepacia J2315]
          Length = 198

 Score =  190 bits (483), Expect = 8e-47,   Method: Composition-based stats.
 Identities = 53/143 (37%), Positives = 76/143 (53%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
           +   FM  A   A+ A    E+PVGAV V  +++I+R  N      D +AHAE+ A+RM 
Sbjct: 35  RDLHFMRLAQAAAEEARAAGEVPVGAVLVRGDEVIARGFNHPIGGHDPSAHAEMAALRMA 94

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
            + L    +P  +LYVTLEPC MCA AI  ARI R+ YGA++PK G   +    +     
Sbjct: 95  AQQLQNYRMPGCELYVTLEPCLMCAGAIMHARIARVVYGAADPKTGACGSVIDAFANPQL 154

Query: 123 HHSPEIYPGISEQRSRQIIQDFF 145
           +H  E+  G+        ++ FF
Sbjct: 155 NHHTEVTGGVLADECGAALKSFF 177


>gi|330872834|gb|EGH06983.1| cytidine/deoxycytidylate deaminase, zinc-binding region
           [Pseudomonas syringae pv. morsprunorum str. M302280PT]
          Length = 169

 Score =  189 bits (482), Expect = 8e-47,   Method: Composition-based stats.
 Identities = 58/148 (39%), Positives = 80/148 (54%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
                FM  AL  A   AL  E+PVGAV V N +II R  N      D +AHAE++AIR 
Sbjct: 10  SNDQHFMREALALAAQGALLGEVPVGAVVVQNGEIIGRGYNCPISGSDPSAHAEMVAIRD 69

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
             + L    LP   LYVTLEPC+MCA  I  +R+ R+ YGA  PK G +++  QF++   
Sbjct: 70  AAKALDNYRLPGSTLYVTLEPCSMCAGLIVHSRVARVVYGALEPKAGIVQSQGQFFSQGF 129

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H      G+  +    ++ +FF+ RR
Sbjct: 130 LNHRVLFEGGVLGEECGAMLSEFFRMRR 157


>gi|220911573|ref|YP_002486882.1| CMP/dCMP deaminase zinc-binding [Arthrobacter chlorophenolicus A6]
 gi|219858451|gb|ACL38793.1| CMP/dCMP deaminase zinc-binding [Arthrobacter chlorophenolicus A6]
          Length = 168

 Score =  189 bits (482), Expect = 8e-47,   Method: Composition-based stats.
 Identities = 58/160 (36%), Positives = 84/160 (52%), Gaps = 12/160 (7%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIR 60
            K + +M  AL EA+ A    ++P+GAV +  + +++    NR  EL D TAHAE++AIR
Sbjct: 6   NKHDRWMGLALAEARAALATGDVPIGAVVLGPDGEVLGAGRNRREELGDPTAHAEVVAIR 65

Query: 61  MGCRIL-----------SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109
                L               L +  L VTLEPC MCA AI LARI R+ +GA + K G 
Sbjct: 66  QAAEQLRERARVGRGLDDGWRLSDCTLVVTLEPCAMCAGAIVLARIPRVVFGAWDEKAGA 125

Query: 110 IENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +          +H  E+YPG+ E+ S  +++DFF + R
Sbjct: 126 AGSVFDILRERRLNHWVEVYPGVREEESAVLLRDFFADHR 165


>gi|120602647|ref|YP_967047.1| CMP/dCMP deaminase, zinc-binding [Desulfovibrio vulgaris DP4]
 gi|120562876|gb|ABM28620.1| tRNA-adenosine deaminase [Desulfovibrio vulgaris DP4]
          Length = 161

 Score =  189 bits (482), Expect = 8e-47,   Method: Composition-based stats.
 Identities = 56/146 (38%), Positives = 76/146 (52%), Gaps = 1/146 (0%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
              M  AL EA+ A    E+PVGAV V    +II R  NR     D +AHAE++A+RM  
Sbjct: 14  ERLMDEALAEARLAQAEGEVPVGAVVVDKAGRIIGRGHNRCLRDNDPSAHAEMVALRMAA 73

Query: 64  RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123
              +   L    L VTLEPC MCA AI  AR+  + YGA +PK G + +  + +     +
Sbjct: 74  TTTANYRLGGTFLVVTLEPCLMCAGAIVHARVEGVVYGAEDPKAGAVTSCLEAFEQPFLN 133

Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149
           H P    G+  +    I++DFF  RR
Sbjct: 134 HRPWHMGGVRRRACTAILKDFFNGRR 159


>gi|116625482|ref|YP_827638.1| tRNA-adenosine deaminase [Candidatus Solibacter usitatus Ellin6076]
 gi|116228644|gb|ABJ87353.1| tRNA-adenosine deaminase [Candidatus Solibacter usitatus Ellin6076]
          Length = 142

 Score =  189 bits (482), Expect = 8e-47,   Method: Composition-based stats.
 Identities = 56/142 (39%), Positives = 77/142 (54%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  AL  A++ A   E+PVGAV  L  ++I R  N      D TAHAEILAIR     ++
Sbjct: 1   MYQALALARSGAALGEVPVGAVIALAGEVIGRGSNAPVAQMDPTAHAEILAIREAASRIA 60

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
              L    LY TLEPC MCA A+  ARI R+ +GA + + GG+ +  Q       +H  E
Sbjct: 61  NYRLTGATLYCTLEPCVMCAGALVAARIERVVFGARDLRFGGVRSKFQLADSDLLNHRVE 120

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
           I  G+      Q++++FF+ RR
Sbjct: 121 IVEGVLAVECVQLLREFFENRR 142


>gi|310288270|ref|YP_003939529.1| tRNA-specific adenosine deaminase [Bifidobacterium bifidum S17]
 gi|309252207|gb|ADO53955.1| tRNA-specific adenosine deaminase [Bifidobacterium bifidum S17]
          Length = 150

 Score =  189 bits (482), Expect = 8e-47,   Method: Composition-based stats.
 Identities = 47/143 (32%), Positives = 67/143 (46%), Gaps = 1/143 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  A+   + A  + ++PVGAV +     +I R  NR     D  AHAEI A+R   +  
Sbjct: 8   MCEAIALGERAGKQGDVPVGAVVLDERGTVIGRGRNRREAGHDPLAHAEIEAMREAAQAR 67

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  L VTLEPC MCA A    RI R+ +GA + K G   +           H P
Sbjct: 68  GDWNLADCTLVVTLEPCPMCAGACIQTRIGRIVFGAWDAKLGACGSIWDIPRDPHVGHVP 127

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           ++  G+ E    +++  FF  RR
Sbjct: 128 QVVGGVREAACARLLTGFFASRR 150


>gi|49081784|gb|AAT50292.1| PA3767 [synthetic construct]
          Length = 183

 Score =  189 bits (482), Expect = 9e-47,   Method: Composition-based stats.
 Identities = 61/148 (41%), Positives = 81/148 (54%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
            +   FM  AL EA+ AA   E+PVGAV V   +II R  NR     D +AHAE+LAIRM
Sbjct: 26  SRDPHFMREALAEAEKAAALGEVPVGAVLVREGEIIGRGFNRPISSHDPSAHAEMLAIRM 85

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
                    LP   LYVTLEPC+MC+  +  ARI+RL YG   PK G +E+  +F+    
Sbjct: 86  AAAEAGNYRLPGSTLYVTLEPCSMCSGLLVHARIQRLVYGTVEPKSGAVESRGRFFEQEH 145

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H   +  G+  +   Q +  FF+ RR
Sbjct: 146 LNHRVMVEGGVLAEECSQALSAFFRARR 173


>gi|15598962|ref|NP_252456.1| hypothetical protein PA3767 [Pseudomonas aeruginosa PAO1]
 gi|116051766|ref|YP_789395.1| hypothetical protein PA14_15680 [Pseudomonas aeruginosa UCBPP-PA14]
 gi|218889954|ref|YP_002438818.1| putative Cytosine/adenosine deaminase [Pseudomonas aeruginosa
           LESB58]
 gi|254236673|ref|ZP_04929996.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719]
 gi|254242457|ref|ZP_04935779.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192]
 gi|296387724|ref|ZP_06877199.1| putative Cytosine/adenosine deaminase [Pseudomonas aeruginosa PAb1]
 gi|313109181|ref|ZP_07795150.1| putative Cytosine/adenosine deaminase [Pseudomonas aeruginosa
           39016]
 gi|9949937|gb|AAG07154.1|AE004795_6 conserved hypothetical protein [Pseudomonas aeruginosa PAO1]
 gi|115586987|gb|ABJ13002.1| putative Cytosine/adenosine deaminase [Pseudomonas aeruginosa
           UCBPP-PA14]
 gi|126168604|gb|EAZ54115.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719]
 gi|126195835|gb|EAZ59898.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192]
 gi|218770177|emb|CAW25939.1| putative Cytosine/adenosine deaminase [Pseudomonas aeruginosa
           LESB58]
 gi|310881652|gb|EFQ40246.1| putative Cytosine/adenosine deaminase [Pseudomonas aeruginosa
           39016]
          Length = 182

 Score =  189 bits (482), Expect = 9e-47,   Method: Composition-based stats.
 Identities = 61/148 (41%), Positives = 81/148 (54%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
            +   FM  AL EA+ AA   E+PVGAV V   +II R  NR     D +AHAE+LAIRM
Sbjct: 26  SRDPHFMREALAEAEKAAALGEVPVGAVLVREGEIIGRGFNRPISSHDPSAHAEMLAIRM 85

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
                    LP   LYVTLEPC+MC+  +  ARI+RL YG   PK G +E+  +F+    
Sbjct: 86  AAAEAGNYRLPGSTLYVTLEPCSMCSGLLVHARIQRLVYGTVEPKSGAVESRGRFFEQEH 145

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H   +  G+  +   Q +  FF+ RR
Sbjct: 146 LNHRVMVEGGVLAEECSQALSAFFRARR 173


>gi|160931212|ref|ZP_02078614.1| hypothetical protein CLOLEP_00049 [Clostridium leptum DSM 753]
 gi|156869767|gb|EDO63139.1| hypothetical protein CLOLEP_00049 [Clostridium leptum DSM 753]
          Length = 163

 Score =  189 bits (482), Expect = 9e-47,   Method: Composition-based stats.
 Identities = 59/147 (40%), Positives = 80/147 (54%), Gaps = 1/147 (0%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
           +   +M  AL+ A  AA   E+PVGAV V +  +IS   NR    K+   HAE+ AI   
Sbjct: 10  EDKAWMREALKLADLAAAEGEVPVGAVIVKDGVLISAGRNRRELGKNALYHAELEAIDGA 69

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
           C+ L    L + DLYVTLEPC MC  AI  ARIRRL YGA +PK G   +    + L   
Sbjct: 70  CKALGGWRLWQCDLYVTLEPCPMCTGAIINARIRRLCYGAKDPKAGSCGSVVNLFELPY- 128

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H P++  G+ E+   + +  FF+  R
Sbjct: 129 NHKPQVISGVLEEACAERLSGFFRSLR 155


>gi|113952793|ref|YP_730770.1| cytidine/deoxycytidylate deaminase family protein [Synechococcus
           sp. CC9311]
 gi|113880144|gb|ABI45102.1| cytidine/deoxycytidylate deaminase family protein [Synechococcus
           sp. CC9311]
          Length = 203

 Score =  189 bits (482), Expect = 9e-47,   Method: Composition-based stats.
 Identities = 46/149 (30%), Positives = 80/149 (53%), Gaps = 1/149 (0%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +K   +M   +E A+    R E+PV AV +  + + I    N+     D   HAE++A+R
Sbjct: 37  QKMQAWMGILIERARRFGERGEVPVSAVVLDHHGRCIGHGINQRELHHDPLGHAELMAVR 96

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
             CR+     L +  L VTLEPC MCA A+  AR+ ++ + A++PK G + +     T  
Sbjct: 97  QACRLRGDWRLNDCTLLVTLEPCPMCAGALVQARVGQVIFAATDPKRGAMGSTINLATHI 156

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
           + HH   +  G+  + +++++  +FK+RR
Sbjct: 157 SAHHRMTVIGGVLGEEAKEMLSSWFKQRR 185


>gi|150019816|ref|YP_001312070.1| CMP/dCMP deaminase, zinc-binding [Clostridium beijerinckii NCIMB
           8052]
 gi|149906281|gb|ABR37114.1| CMP/dCMP deaminase, zinc-binding [Clostridium beijerinckii NCIMB
           8052]
          Length = 149

 Score =  189 bits (482), Expect = 9e-47,   Method: Composition-based stats.
 Identities = 56/143 (39%), Positives = 77/143 (53%), Gaps = 1/143 (0%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           F+  A EEA+ A  + EIPVGAV VL++KII RA N    L D TAHAEILAI+   + +
Sbjct: 4   FLKIAKEEAKMAMKKGEIPVGAVIVLDDKIIGRAHNLKETLNDSTAHAEILAIKEASKFI 63

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L   ++YVTLEPC MCA AI  +RI ++Y G  N   G   +          +   
Sbjct: 64  GDWRLNRAEMYVTLEPCPMCAGAIIQSRISKVYIGTFNKDMGACGSVIDVTDNKWLNSFV 123

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
                + ++    I+ +FF +RR
Sbjct: 124 S-TKWLYDKECSDIMLEFFCQRR 145


>gi|330959126|gb|EGH59386.1| cytidine/deoxycytidylate deaminase, zinc-binding region
           [Pseudomonas syringae pv. maculicola str. ES4326]
          Length = 169

 Score =  189 bits (482), Expect = 9e-47,   Method: Composition-based stats.
 Identities = 59/148 (39%), Positives = 81/148 (54%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
            K   FM  AL  A   AL  E+PVGAV V + +II R  N      D +AHAE++AIR 
Sbjct: 10  SKDQHFMREALALAAQGALLGEVPVGAVLVQHGEIIGRGYNCPISGSDPSAHAEMMAIRD 69

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
             + L    LP   LYVTLEPC+MCA  I  +R+ R+ YGA  PK G +E+  QF++   
Sbjct: 70  AAKALDNYRLPGSTLYVTLEPCSMCAGLIVHSRVARVVYGALEPKAGIVESQGQFFSQGF 129

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H      G+  +    ++ +FF+ RR
Sbjct: 130 LNHRVLFEGGVLGEECGAMLSEFFRMRR 157


>gi|83859467|ref|ZP_00952988.1| cytidine and deoxycytidylate deaminase family protein [Oceanicaulis
           alexandrii HTCC2633]
 gi|83852914|gb|EAP90767.1| cytidine and deoxycytidylate deaminase family protein [Oceanicaulis
           alexandrii HTCC2633]
          Length = 164

 Score =  189 bits (482), Expect = 9e-47,   Method: Composition-based stats.
 Identities = 68/145 (46%), Positives = 90/145 (62%), Gaps = 2/145 (1%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLN--NKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           FM  AL  AQ AA   E PVGAV V    + II+ AGN      D T HAEI A+R+  +
Sbjct: 16  FMRRALGLAQAAAAAGETPVGAVIVDPQTDNIIAEAGNAPISDCDPTGHAEIRALRLAAQ 75

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
            L    L  ++LYVTLEPC MCA AIS ARI ++ YGAS+PKGG +++G QF+   TCH 
Sbjct: 76  KLGNYRLTGLELYVTLEPCAMCAGAISHARIGKVIYGASDPKGGAVDHGPQFFAQPTCHW 135

Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149
            PE+  G+    + ++++ FF+ RR
Sbjct: 136 RPEVQGGVLADEASEMLKAFFRARR 160


>gi|304413544|ref|ZP_07395017.1| CMP/dCMP deaminase [Candidatus Regiella insecticola LSR1]
 gi|304284387|gb|EFL92780.1| CMP/dCMP deaminase [Candidatus Regiella insecticola LSR1]
          Length = 181

 Score =  189 bits (482), Expect = 9e-47,   Method: Composition-based stats.
 Identities = 57/143 (39%), Positives = 76/143 (53%), Gaps = 1/143 (0%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
               +M+ AL+ A  A    E+PVGAV VL NKII    N+     D +AHAEI+A+R  
Sbjct: 27  NDEHWMAAALKLAARAQAAGEVPVGAVLVLQNKIIGEGWNQPIIHHDPSAHAEIMALRQA 86

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
            +      LP+  LYVTLEPC MCA A+  +RI RL YGA++ K G +   T        
Sbjct: 87  GQQQKNYRLPDATLYVTLEPCVMCAGAMIHSRISRLVYGANDNKIGAVGALT-LLNHPAM 145

Query: 123 HHSPEIYPGISEQRSRQIIQDFF 145
           +H  EI  G+      Q++  FF
Sbjct: 146 NHQVEITAGVLVDACSQMLSTFF 168


>gi|288958823|ref|YP_003449164.1| CMP/dCMP deaminase [Azospirillum sp. B510]
 gi|288911131|dbj|BAI72620.1| CMP/dCMP deaminase [Azospirillum sp. B510]
          Length = 150

 Score =  189 bits (482), Expect = 9e-47,   Method: Composition-based stats.
 Identities = 75/131 (57%), Positives = 97/131 (74%), Gaps = 2/131 (1%)

Query: 21  RNEIPVGAVAVL--NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYV 78
           R E+PVGAV V      +++ AGNR  EL D +AHAE+LAIR  C    Q  LP  DLYV
Sbjct: 20  RGEVPVGAVIVDAATGTVLASAGNRTEELCDPSAHAELLAIRAACAERRQPRLPGCDLYV 79

Query: 79  TLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSR 138
           TLEPC +CAAAIS ARIRR+YYGA +PKGG +++G +F+T ATCHH+PE+Y GI E R+ 
Sbjct: 80  TLEPCALCAAAISFARIRRVYYGAYDPKGGAVDHGPRFFTQATCHHAPEVYSGIGETRAS 139

Query: 139 QIIQDFFKERR 149
            +++DFF++RR
Sbjct: 140 LLLRDFFRKRR 150


>gi|42521861|ref|NP_967241.1| cytosine deaminase [Bdellovibrio bacteriovorus HD100]
 gi|39574391|emb|CAE77895.1| Cytosine deaminase [Bdellovibrio bacteriovorus HD100]
          Length = 313

 Score =  189 bits (482), Expect = 9e-47,   Method: Composition-based stats.
 Identities = 56/146 (38%), Positives = 76/146 (52%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
              +M  AL  A+ AA R E+PV A+ V    +IS A N     +    HAE+LA+    
Sbjct: 7   DEKWMRKALALARKAAEREEVPVAAIVVGPEGMISYAINTRERQQSPLGHAELLALHKAS 66

Query: 64  RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123
           +      L +  LYVTLEPC MCA AI  +RI R+ YGA + K G +E+          +
Sbjct: 67  QKRGSWRLSDCTLYVTLEPCVMCAGAIQQSRIARVVYGAKDVKAGAVESLYHILKDPRLN 126

Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149
           H  E+  GI E    +++QDFFK RR
Sbjct: 127 HQVEVSSGILEDDCSELLQDFFKGRR 152


>gi|152112358|sp|Q92G39|Y1285_RICCN RecName: Full=Uncharacterized deaminase RC1285
          Length = 153

 Score =  189 bits (482), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 64/144 (44%), Positives = 95/144 (65%), Gaps = 2/144 (1%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVL--NNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M  AL++A+ A  +NE+PVGAV V   + KII+   N   E  +   HAEI+AI   C +
Sbjct: 1   MEQALKQAKIAFDKNEVPVGAVVVDRLHQKIIASTHNNTEEKNNALYHAEIIAINEACNL 60

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           +S + L + D+YVTLEPC MCAAAI+ +R++RL+YGAS+ K G +E+  +++  + C H 
Sbjct: 61  ISSKNLNDYDIYVTLEPCAMCAAAIAHSRLKRLFYGASDSKHGVVESNLRYFNSSACFHR 120

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
           PEIY GI  + S  ++++FFK  R
Sbjct: 121 PEIYSGILAEDSGLLMKEFFKRIR 144


>gi|330985033|gb|EGH83136.1| cytidine/deoxycytidylate deaminase family protein [Pseudomonas
           syringae pv. lachrymans str. M301315]
          Length = 169

 Score =  189 bits (482), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 59/148 (39%), Positives = 80/148 (54%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
            K   FM  AL  A   AL  E+PVGAV V N +II R  N      D +AHAE++AIR 
Sbjct: 10  SKDQDFMREALALAAQGALLGEVPVGAVVVQNGEIIGRGYNCPISASDPSAHAEMVAIRD 69

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
               L    LP   LYVTLEPC+MCA  I  +R+ R+ YGA  PK G +++  QF++   
Sbjct: 70  AASALDNYRLPGSTLYVTLEPCSMCAGLIVHSRVARVVYGALEPKAGIVQSQGQFFSQGF 129

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H      G+  +    ++ +FF+ RR
Sbjct: 130 LNHRVLFEGGVLSEECGAMLSEFFRMRR 157


>gi|221198274|ref|ZP_03571320.1| tRNA-specific adenosine deaminase [Burkholderia multivorans CGD2M]
 gi|221208213|ref|ZP_03581217.1| tRNA-specific adenosine deaminase [Burkholderia multivorans CGD2]
 gi|221171861|gb|EEE04304.1| tRNA-specific adenosine deaminase [Burkholderia multivorans CGD2]
 gi|221182206|gb|EEE14607.1| tRNA-specific adenosine deaminase [Burkholderia multivorans CGD2M]
          Length = 187

 Score =  189 bits (482), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 53/146 (36%), Positives = 78/146 (53%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
            +   FM  AL  A+ A    E+PVGAV V  +++++R  N      D +AHAE+ A+RM
Sbjct: 23  SRDVHFMRLALAAAEEARAAGEVPVGAVLVRGDEVLARGFNHPIGGHDPSAHAEMAALRM 82

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
             + L    +P  +LYVTLEPC MCA AI  ARI R+ +GA++PK G   +    +    
Sbjct: 83  AAQHLQNYRMPGCELYVTLEPCLMCAGAIMHARIARVVFGAADPKTGVCGSVMDAFANPQ 142

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKE 147
            +H  E+  G+        ++ FF E
Sbjct: 143 LNHHTEVVGGVLANECGAALKSFFAE 168


>gi|167626885|ref|YP_001677385.1| zinc-binding protein [Francisella philomiragia subsp. philomiragia
           ATCC 25017]
 gi|167596886|gb|ABZ86884.1| zinc-binding protein [Francisella philomiragia subsp. philomiragia
           ATCC 25017]
          Length = 142

 Score =  189 bits (482), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 50/142 (35%), Positives = 79/142 (55%), Gaps = 1/142 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  A E+A  A    E+P+GAV V +N+I+++  N+   L D TAHAEIL +R   + L 
Sbjct: 1   MQKAYEQALLAYKAGEVPIGAVLVKDNQIVAQDFNKTIMLNDPTAHAEILVLRQAAKELE 60

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
              L    LYVTLEPC MC   +  AR+  L Y   + + G I +  + +   + +H+ +
Sbjct: 61  NYRLVNTKLYVTLEPCIMCLGGLIQARVSELVYACDDTRVG-IFSREKLHQSKSINHNLK 119

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
           +  G+  +   ++++DFFK RR
Sbjct: 120 VTSGVMIEECSKLLRDFFKLRR 141


>gi|144897625|emb|CAM74489.1| Cytidine/deoxycytidylate deaminase, zinc-binding region
           [Magnetospirillum gryphiswaldense MSR-1]
          Length = 146

 Score =  189 bits (482), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 72/129 (55%), Positives = 91/129 (70%)

Query: 21  RNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80
           R E+PVGAV V   ++I+  GNR  EL D TAHAE+  IR     L Q  L E DLYVTL
Sbjct: 18  RGEVPVGAVLVRAGQVIAADGNRVEELHDPTAHAEMQVIRAAATRLGQTRLEECDLYVTL 77

Query: 81  EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140
           EPC MCAAAI+ AR+RRLYYGA +PKGGG+E+G + +  +TCHH PEI  G+ E  +  +
Sbjct: 78  EPCPMCAAAIAHARLRRLYYGAYDPKGGGVEHGARVFERSTCHHRPEIVGGLREAENAAL 137

Query: 141 IQDFFKERR 149
           +QDFF++RR
Sbjct: 138 LQDFFRQRR 146


>gi|113477509|ref|YP_723570.1| tRNA-adenosine deaminase [Trichodesmium erythraeum IMS101]
 gi|110168557|gb|ABG53097.1| tRNA-adenosine deaminase [Trichodesmium erythraeum IMS101]
          Length = 156

 Score =  189 bits (482), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 57/147 (38%), Positives = 75/147 (51%), Gaps = 1/147 (0%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
              +MS  LE A+ A    E+PV A  V  + K+++ A NR     D T HAEILA+R  
Sbjct: 10  HKKWMSRVLELAKTAGDAGEVPVAAAVVNSDGKLVTEAQNRRERDFDPTGHAEILALRQA 69

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
            ++L    L +  LYV LEPC MC  AI  ARI  L YGA +PK G +     F      
Sbjct: 70  GQVLQNWHLNQCTLYVNLEPCPMCTGAILQARIGLLVYGADDPKTGTVRTVANFPDSVFS 129

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H   +  GI E   RQ +Q +F + R
Sbjct: 130 NHRLSVLGGIMEGACRQQLQSWFAKFR 156


>gi|126668408|ref|ZP_01739365.1| hypothetical protein MELB17_14743 [Marinobacter sp. ELB17]
 gi|126627117|gb|EAZ97757.1| hypothetical protein MELB17_14743 [Marinobacter sp. ELB17]
          Length = 167

 Score =  189 bits (481), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 57/147 (38%), Positives = 78/147 (53%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
               +M+ AL  A  AA   E+PVGAV V++ + +    N+     D TAHAEI A+R  
Sbjct: 11  NDEYWMNRALALAAQAAALGEVPVGAVVVIDGQEVGAGFNKPISSCDPTAHAEICALRQA 70

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
              L+   L    LYVTLEPCTMC  AI  +RI R+ YGA+ PK G +E+  + +     
Sbjct: 71  ATYLNNYRLSGATLYVTLEPCTMCVGAIVHSRISRVVYGATEPKAGAVESARRTFDEPHL 130

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +   E   G+  +   +II DFF  RR
Sbjct: 131 NWRVETRGGLLAEPCSRIISDFFSRRR 157


>gi|119179553|ref|XP_001241350.1| hypothetical protein CIMG_08513 [Coccidioides immitis RS]
          Length = 230

 Score =  189 bits (481), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 47/144 (32%), Positives = 69/144 (47%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
              FM  AL+ A+ A    E PVG V V + K+I R  N      + T HAE LAI    
Sbjct: 51  HEQFMREALQMAEQALAIGETPVGCVLVHDGKVIGRGMNDTNRSLNGTRHAEFLAIEEAL 110

Query: 64  RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123
           R   + I    DLYVT+EPC MCA+ +    IRR+++G  N + GG       ++     
Sbjct: 111 RSYPRSIFRTTDLYVTVEPCIMCASLLRQNYIRRVFFGCVNDRFGGTGGVLNLHSDRAID 170

Query: 124 HSPEIYPGISEQRSRQIIQDFFKE 147
               +Y GI    +  +++ F+ +
Sbjct: 171 PPYTVYGGIFRNEAIMLLRRFYIQ 194


>gi|238897621|ref|YP_002923300.1| CMP/dCMP deaminase; zinc-binding [Candidatus Hamiltonella defensa
           5AT (Acyrthosiphon pisum)]
 gi|229465378|gb|ACQ67152.1| CMP/dCMP deaminase; zinc-binding [Candidatus Hamiltonella defensa
           5AT (Acyrthosiphon pisum)]
          Length = 168

 Score =  189 bits (481), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 57/147 (38%), Positives = 80/147 (54%), Gaps = 2/147 (1%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
             + +M  AL  A+ A    E+P+GAV V+NN+ I    N++    D TAHAEI+A+R  
Sbjct: 14  DHHYWMRHALSLAEQAQASGEVPIGAVVVVNNQSIGEGWNQSVMCHDPTAHAEIIALRQA 73

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
            R      L    LYVTLEPC MC  AI  +RIR L YGA +PK GG+   T+   +   
Sbjct: 74  GRHQKNYRLVNATLYVTLEPCMMCVGAIMHSRIRGLVYGAPDPKKGGVAFLTRMMNIQV- 132

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
               +I   +  Q   +++ DFF++RR
Sbjct: 133 -KRIDIKTDVLSQTCSRMLVDFFQQRR 158


>gi|254510248|ref|ZP_05122315.1| cytosine deaminase [Rhodobacteraceae bacterium KLH11]
 gi|221533959|gb|EEE36947.1| cytosine deaminase [Rhodobacteraceae bacterium KLH11]
          Length = 144

 Score =  189 bits (481), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 74/143 (51%), Positives = 101/143 (70%), Gaps = 1/143 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  ALE+A+ AA R E+PVGAV V  + ++++  GNR REL D TAHAEILA+R  C  +
Sbjct: 1   MKLALEQARAAADRGEVPVGAVIVAPDGQVVAADGNRTRELNDPTAHAEILALRAACAQV 60

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
             E LP+ DLYVTLEPC MCAAA++ ARIRR+YYGAS+PK GG+ +G + ++    HH P
Sbjct: 61  KSERLPDHDLYVTLEPCAMCAAALAAARIRRVYYGASDPKSGGVAHGARVFSHPQTHHRP 120

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+Y GI+   +  +++ FF  +R
Sbjct: 121 EVYDGIAADEAAALLKQFFAAQR 143


>gi|70732252|ref|YP_262008.1| cytidine/deoxycytidylate deaminase family protein [Pseudomonas
           fluorescens Pf-5]
 gi|68346551|gb|AAY94157.1| cytidine/deoxycytidylate deaminase family protein [Pseudomonas
           fluorescens Pf-5]
          Length = 162

 Score =  189 bits (481), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 59/148 (39%), Positives = 82/148 (55%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
            +   FM  AL  A   A   E+PVGAV VL+ ++I R  N      D +AHAE++AIR 
Sbjct: 13  SRDQDFMREALALAAQGAALGEVPVGAVLVLDGQVIGRGYNCPISGSDPSAHAEMVAIRE 72

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
             + +S   LP   LYVTLEPC+MCA  I  +RI R+ YGA  PK G +++  QF+T   
Sbjct: 73  AAQAVSNYRLPGSTLYVTLEPCSMCAGLIVHSRIARVVYGALEPKAGIVQSQGQFFTQGF 132

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H      G+  +    ++ +FFK RR
Sbjct: 133 LNHRVLYEGGVLAEECGTVLSEFFKARR 160


>gi|296446445|ref|ZP_06888389.1| CMP/dCMP deaminase zinc-binding [Methylosinus trichosporium OB3b]
 gi|296256080|gb|EFH03163.1| CMP/dCMP deaminase zinc-binding [Methylosinus trichosporium OB3b]
          Length = 183

 Score =  189 bits (481), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 72/127 (56%), Positives = 94/127 (74%)

Query: 23  EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEP 82
           E+PVGA  V N  II+ AGNR    +D TAHAE+LAIR  C  L  E L + DLYVTLEP
Sbjct: 57  EVPVGATIVRNGAIIAVAGNRTLRDRDPTAHAEMLAIRAACATLRTERLTDCDLYVTLEP 116

Query: 83  CTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQ 142
           C MCAAAIS ARIRRLY+GA +PKGGG+E+G + ++  TCHH+PE+Y G+ E+ + ++++
Sbjct: 117 CAMCAAAISFARIRRLYFGAEDPKGGGVEHGARVFSQKTCHHAPEVYGGLREREAAELLR 176

Query: 143 DFFKERR 149
            FF+ RR
Sbjct: 177 AFFQARR 183


>gi|28868664|ref|NP_791283.1| cytidine/deoxycytidylate deaminase family protein [Pseudomonas
           syringae pv. tomato str. DC3000]
 gi|213972056|ref|ZP_03400150.1| cytidine/deoxycytidylate deaminase family protein [Pseudomonas
           syringae pv. tomato T1]
 gi|301385879|ref|ZP_07234297.1| cytidine/deoxycytidylate deaminase family protein [Pseudomonas
           syringae pv. tomato Max13]
 gi|302063770|ref|ZP_07255311.1| cytidine/deoxycytidylate deaminase family protein [Pseudomonas
           syringae pv. tomato K40]
 gi|302132520|ref|ZP_07258510.1| cytidine/deoxycytidylate deaminase family protein [Pseudomonas
           syringae pv. tomato NCPPB 1108]
 gi|28851903|gb|AAO54978.1| cytidine/deoxycytidylate deaminase family protein [Pseudomonas
           syringae pv. tomato str. DC3000]
 gi|213923189|gb|EEB56790.1| cytidine/deoxycytidylate deaminase family protein [Pseudomonas
           syringae pv. tomato T1]
          Length = 169

 Score =  189 bits (481), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 59/148 (39%), Positives = 80/148 (54%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
                FM  AL  A   AL  E+PVGAV V N +II R  N      D +AHAE++AIR 
Sbjct: 10  SNDQHFMREALALAAQGALLGEVPVGAVVVHNGEIIGRGYNCPISGSDPSAHAEMVAIRD 69

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
             R L    LP   LYVTLEPC+MCA  I  +R+ R+ YGA  PK G +++  QF++   
Sbjct: 70  AARALGNYRLPGSTLYVTLEPCSMCAGLIVHSRVARVVYGALEPKAGIVQSQGQFFSQGF 129

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H      G+  +    ++ +FF+ RR
Sbjct: 130 LNHRVLFEGGVLGEECGAMLSEFFRLRR 157


>gi|289450534|ref|YP_003475019.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Clostridiales genomosp. BVAB3 str. UPII9-5]
 gi|289185081|gb|ADC91506.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Clostridiales genomosp. BVAB3 str. UPII9-5]
          Length = 149

 Score =  189 bits (481), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 55/142 (38%), Positives = 75/142 (52%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  AL +A  +  + E P+GAV V   +I++   N  +    +T HAEI AI    R L 
Sbjct: 1   MRRALHQAALSERKGEAPIGAVIVYQGRIVAHGRNSRQNSNLITGHAEISAILQAERKLK 60

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
              LPE D+YVTLEPC MCA AI  ARIR +Y+GAS+PKGG + +    + L   +H   
Sbjct: 61  SWRLPECDIYVTLEPCIMCAGAIQQARIRHVYFGASDPKGGAVVSCGNIFDLPGLNHHVG 120

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
               I        + +FF+  R
Sbjct: 121 YTGAILADECSTALSNFFRNLR 142


>gi|23016531|ref|ZP_00056286.1| COG0590: Cytosine/adenosine deaminases [Magnetospirillum
           magnetotacticum MS-1]
          Length = 145

 Score =  189 bits (481), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 76/126 (60%), Positives = 98/126 (77%), Gaps = 1/126 (0%)

Query: 24  IPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83
           +PVGAV V + +II+RAGNR  EL D TAHAE+LAIR    +L  + L + DLYVTLEPC
Sbjct: 21  VPVGAVVVQDGRIIARAGNRVEELGDPTAHAEMLAIR-AATVLGDKRLEDCDLYVTLEPC 79

Query: 84  TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQD 143
            MCAAAISLARIRRLY+GA +PK GG+E+G++ +  ATCHH PE+Y G+ E+RS ++++ 
Sbjct: 80  PMCAAAISLARIRRLYFGAYDPKSGGVEHGSKVFDHATCHHRPEVYGGLEERRSAELLRV 139

Query: 144 FFKERR 149
           FF ERR
Sbjct: 140 FFAERR 145


>gi|218129188|ref|ZP_03457992.1| hypothetical protein BACEGG_00763 [Bacteroides eggerthii DSM 20697]
 gi|217988566|gb|EEC54886.1| hypothetical protein BACEGG_00763 [Bacteroides eggerthii DSM 20697]
          Length = 138

 Score =  189 bits (481), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 58/142 (40%), Positives = 77/142 (54%), Gaps = 5/142 (3%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  AL EAQ A  R E+PVGAV V  +++I+RA N    L DVTAHAE+ AI      L 
Sbjct: 1   MKQALLEAQKAGDRGEVPVGAVVVCKDRVIARAHNLTETLTDVTAHAEMQAITAAASTLG 60

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
            + L E  LYVT+EPC MCA AI+ A+  RL +GA + K G      Q Y     H    
Sbjct: 61  GKYLNECTLYVTVEPCVMCAGAIAWAQTGRLVFGAEDEKRG-----YQRYAPHALHPKTV 115

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
           +  G+       ++++FF  +R
Sbjct: 116 VVKGVLGDECAALMKNFFAGKR 137


>gi|325680619|ref|ZP_08160161.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Ruminococcus albus 8]
 gi|324107689|gb|EGC01963.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Ruminococcus albus 8]
          Length = 156

 Score =  189 bits (481), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 54/151 (35%), Positives = 79/151 (52%), Gaps = 3/151 (1%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLN--NKIISRAGNRNRELKDVTAHAEILA 58
           M +  ++M  ALE A  AA  +E+PVGAV V     +I+ R  NR    +    HAEI+A
Sbjct: 1   MTRDEMYMRKALELAALAAEEDEVPVGAVVVKKSTGEIVGRGFNRREYGRSPLTHAEIVA 60

Query: 59  IRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
           I    R L    L + +L+VTLEPC MCA A+  +R+ R+ +GA + K G   +    + 
Sbjct: 61  IEQASRKLGGWRLIDCELFVTLEPCPMCAGAVINSRVERVVFGAYDKKAGSCGSVVDLFG 120

Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
           L   +H PE   G+ E+     +  FF+  R
Sbjct: 121 LPY-NHKPECVGGVLEEECAAALSVFFRGLR 150


>gi|326385790|ref|ZP_08207419.1| tRNA-adenosine deaminase [Novosphingobium nitrogenifigens DSM
           19370]
 gi|326209769|gb|EGD60557.1| tRNA-adenosine deaminase [Novosphingobium nitrogenifigens DSM
           19370]
          Length = 142

 Score =  189 bits (481), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 67/142 (47%), Positives = 94/142 (66%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  A+ EA+NAA    +P+GAV +   ++I+ A N  R+  D TAHAEILAIR   + L 
Sbjct: 1   MRLAMVEARNAAQVGAVPIGAVVMRGGEVIATAHNGPRDCHDPTAHAEILAIRAAAKALG 60

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
            + L + DL+VTLEPC MCA AI+ ARI R+YY A +PKGG +E+G + +  +T  H PE
Sbjct: 61  ADRLDDCDLWVTLEPCAMCAGAIAHARIARVYYAAPDPKGGAVEHGPRLFEQSTVLHRPE 120

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
           IY G+ E  S +++++FF  RR
Sbjct: 121 IYSGLGELESARLLREFFAARR 142


>gi|110632788|ref|YP_672996.1| CMP/dCMP deaminase, zinc-binding [Mesorhizobium sp. BNC1]
 gi|110283772|gb|ABG61831.1| CMP/dCMP deaminase, zinc-binding protein [Chelativorans sp. BNC1]
          Length = 171

 Score =  189 bits (481), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 72/127 (56%), Positives = 95/127 (74%)

Query: 23  EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEP 82
           E+PVGAV V + ++++ AGNR REL D TAHAE+LAIR  C     E L   DLYVTLEP
Sbjct: 44  EVPVGAVVVRDGRLLASAGNRTRELNDPTAHAEMLAIRAACEAEGAERLIGADLYVTLEP 103

Query: 83  CTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQ 142
           C MCA AIS ARIRRLY+GAS+PKGGG+ +G +F+T  TCHH+PE+Y G+ E+ +  +++
Sbjct: 104 CAMCAGAISFARIRRLYFGASDPKGGGVIHGGRFFTQPTCHHAPEVYEGLGEREAATLLK 163

Query: 143 DFFKERR 149
           +FF  +R
Sbjct: 164 NFFAGKR 170


>gi|289177738|gb|ADC84984.1| tRNA-specific adenosine deaminase [Bifidobacterium animalis subsp.
           lactis BB-12]
          Length = 204

 Score =  189 bits (481), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 50/150 (33%), Positives = 73/150 (48%), Gaps = 1/150 (0%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAI 59
           M +    M  AL +A+ A    ++PVGAV +  + ++I R  N      D  AHAEI+A+
Sbjct: 53  MTQYAEAMGEALAQARMARSAGDVPVGAVVLDAHGEVIGRGRNLRERDADPLAHAEIVAM 112

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
           R    +     L +  L VTLEPC MCA A    RI R+ +G  + K G   +       
Sbjct: 113 REAAAVRGNWNLADCTLVVTLEPCPMCAGACLQTRIGRIVFGGWDAKLGACGSVWDIPRD 172

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
               H PE+Y G+ E+    ++ +FF  RR
Sbjct: 173 PHVGHEPEVYGGVCERECTALLAEFFHSRR 202


>gi|258509262|ref|YP_003172013.1| CMP/dCMP deaminase [Lactobacillus rhamnosus GG]
 gi|257149189|emb|CAR88162.1| CMP/dCMP deaminase, zinc-binding [Lactobacillus rhamnosus GG]
          Length = 168

 Score =  189 bits (481), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 52/128 (40%), Positives = 69/128 (53%)

Query: 22  NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81
            E+P+GAV V + +II R  N     +D T HAEILAI+  CR L    L +  L+VTLE
Sbjct: 24  GEVPIGAVVVHDQQIIGRGYNLRETTQDATQHAEILAIQAACRQLGTWRLEDCSLFVTLE 83

Query: 82  PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141
           PC MCA  +  ARI   Y+GA++PK G              +H   + PGI    S  ++
Sbjct: 84  PCPMCAGTMINARIATCYFGATDPKAGVAGTFYNLLEDTRFNHQVAVVPGIQAIASAALL 143

Query: 142 QDFFKERR 149
           QDFF+  R
Sbjct: 144 QDFFRAIR 151


>gi|163784431|ref|ZP_02179312.1| Cytosine/adenosine deaminase [Hydrogenivirga sp. 128-5-R1-1]
 gi|159880298|gb|EDP73921.1| Cytosine/adenosine deaminase [Hydrogenivirga sp. 128-5-R1-1]
          Length = 146

 Score =  188 bits (480), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 52/149 (34%), Positives = 86/149 (57%), Gaps = 3/149 (2%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M+K  V     +EEA+ A  ++E+PVGA+ V N +IIS+  N+     +   HAEI+AI 
Sbjct: 1   MQKNIV--KKLIEEAKKAYKKDEVPVGALIVRNGEIISKGHNQRITKNNALYHAEIVAIE 58

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
             C+ L    L + +++V+LEPC MCA AI  +RI+++Y+ A + KGG + +  + +   
Sbjct: 59  KACKKLKSWRLDDCEIWVSLEPCVMCAGAIMQSRIKKVYFLAQDEKGGAVISKYRLFDDN 118

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
                 + Y  I  + +  I++ FFKE+R
Sbjct: 119 KLPFKVD-YEYIPVKEASDILKRFFKEKR 146


>gi|115352007|ref|YP_773846.1| CMP/dCMP deaminase [Burkholderia ambifaria AMMD]
 gi|115281995|gb|ABI87512.1| tRNA-adenosine deaminase [Burkholderia ambifaria AMMD]
          Length = 193

 Score =  188 bits (480), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 53/143 (37%), Positives = 76/143 (53%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
           +   FM  A   A+ A    E+PVGAV V  +++I+R  N      D +AHAE+ A+RM 
Sbjct: 30  RDLHFMRLAQAAAEEARAAGEVPVGAVLVCGDEVIARGFNHPIGGHDPSAHAEMAALRMA 89

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
            + L    +P  +LYVTLEPC MCA AI  ARI R+ YGA++PK G   +    +     
Sbjct: 90  AQHLQNYRMPGCELYVTLEPCLMCAGAIMHARIARVVYGAADPKTGACGSVIDAFANPQL 149

Query: 123 HHSPEIYPGISEQRSRQIIQDFF 145
           +H  E+  G+        ++ FF
Sbjct: 150 NHHTEVTGGVLADECGAALKSFF 172


>gi|172060929|ref|YP_001808581.1| CMP/dCMP deaminase zinc-binding [Burkholderia ambifaria MC40-6]
 gi|171993446|gb|ACB64365.1| CMP/dCMP deaminase zinc-binding [Burkholderia ambifaria MC40-6]
          Length = 159

 Score =  188 bits (480), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 48/124 (38%), Positives = 69/124 (55%)

Query: 22  NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81
            E+PVGAV V  +++I+R  N      D +AHAE+ A+RM  + L    +P  +LYVTLE
Sbjct: 15  GEVPVGAVLVCGDEVIARGFNHPIGGHDPSAHAEMAALRMAAQHLQNYRMPGCELYVTLE 74

Query: 82  PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141
           PC MCA AI  ARI R+ YGA++PK G   +    +     +H  E+  G+        +
Sbjct: 75  PCLMCAGAIMHARIARVVYGAADPKTGACGSVIDAFANPQLNHHTEVTGGVLADECGAAL 134

Query: 142 QDFF 145
           + FF
Sbjct: 135 KSFF 138


>gi|171320346|ref|ZP_02909387.1| CMP/dCMP deaminase zinc-binding [Burkholderia ambifaria MEX-5]
 gi|171094424|gb|EDT39487.1| CMP/dCMP deaminase zinc-binding [Burkholderia ambifaria MEX-5]
          Length = 159

 Score =  188 bits (480), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 48/124 (38%), Positives = 69/124 (55%)

Query: 22  NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81
            E+PVGAV V  +++I+R  N      D +AHAE+ A+RM  + L    +P  +LYVTLE
Sbjct: 15  GEVPVGAVLVCGDEVIARGFNHPIGGHDPSAHAEMAALRMAAQHLQNYRMPGCELYVTLE 74

Query: 82  PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141
           PC MCA AI  ARI R+ YGA++PK G   +    +     +H  E+  G+        +
Sbjct: 75  PCLMCAGAIMHARIARVVYGAADPKTGACGSVIDAFANPQLNHHTEVTGGVLADECGAAL 134

Query: 142 QDFF 145
           + FF
Sbjct: 135 KSFF 138


>gi|325519416|gb|EGC98819.1| tRNA-adenosine deaminase [Burkholderia sp. TJI49]
          Length = 193

 Score =  188 bits (480), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 53/143 (37%), Positives = 76/143 (53%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
           +   FM  A   A+ A    E+PVGAV V  +++I+R  N      D +AHAE+ A+RM 
Sbjct: 29  RDVHFMRLAQAAAEEARAAGEVPVGAVLVRGDEVIARGFNHPIGGHDPSAHAEMAALRMA 88

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
            + L    +P  +LYVTLEPC MCA AI  ARI R+ YGA++PK G   +    +     
Sbjct: 89  AQHLQNYRMPGCELYVTLEPCLMCAGAIMHARIARVVYGAADPKTGACGSVIDAFANPQL 148

Query: 123 HHSPEIYPGISEQRSRQIIQDFF 145
           +H  E+  G+        ++ FF
Sbjct: 149 NHHTEVTGGVLADECGAALKSFF 171


>gi|331019747|gb|EGH99803.1| cytidine/deoxycytidylate deaminase family protein [Pseudomonas
           syringae pv. lachrymans str. M302278PT]
          Length = 169

 Score =  188 bits (480), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 59/148 (39%), Positives = 80/148 (54%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
                FM  AL  A   AL  E+PVGAV V N +II R  N      D +AHAE++AIR 
Sbjct: 10  SNDQHFMREALALAAQGALLGEVPVGAVVVHNGEIIGRGYNCPISGSDPSAHAEMVAIRD 69

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
             R L    LP   LYVTLEPC+MCA  I  +R+ R+ YGA  PK G +++  QF++   
Sbjct: 70  AARALGNYRLPGSTLYVTLEPCSMCAGLIVHSRLARVVYGALEPKAGIVQSQGQFFSQGF 129

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H      G+  +    ++ +FF+ RR
Sbjct: 130 LNHRVLFEGGVLGEECGAMLSEFFRLRR 157


>gi|254429334|ref|ZP_05043041.1| Cytidine and deoxycytidylate deaminase zinc-binding region domain
           protein [Alcanivorax sp. DG881]
 gi|196195503|gb|EDX90462.1| Cytidine and deoxycytidylate deaminase zinc-binding region domain
           protein [Alcanivorax sp. DG881]
          Length = 150

 Score =  188 bits (480), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 56/147 (38%), Positives = 83/147 (56%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
               +M  AL  A+ AA   E+PVGA+ V +N+++ +  N+     D +AHAEI+A+R  
Sbjct: 2   DDQYWMQQALALARQAADNGEVPVGALVVRDNRLLGKGYNQPIIASDPSAHAEIVAMRSA 61

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
            +      L    LYVTLEPCTMC  A+  ARI RL YGAS P+ G  E+  Q  ++   
Sbjct: 62  AQAERNYRLSGSTLYVTLEPCTMCFGAMVHARIGRLVYGASEPRAGVCESQLQLPSVDFY 121

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H  ++  G+  + S  +++ FF ERR
Sbjct: 122 NHRMDVEGGVLAEESALLLKGFFAERR 148


>gi|28198227|ref|NP_778541.1| cytosine deaminase [Xylella fastidiosa Temecula1]
 gi|170729545|ref|YP_001774978.1| cytosine deaminase [Xylella fastidiosa M12]
 gi|182680863|ref|YP_001829023.1| CMP/dCMP deaminase zinc-binding [Xylella fastidiosa M23]
 gi|28056297|gb|AAO28190.1| cytosine deaminase [Xylella fastidiosa Temecula1]
 gi|167964338|gb|ACA11348.1| cytosine deaminase [Xylella fastidiosa M12]
 gi|182630973|gb|ACB91749.1| CMP/dCMP deaminase zinc-binding [Xylella fastidiosa M23]
          Length = 165

 Score =  188 bits (480), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 52/149 (34%), Positives = 76/149 (51%), Gaps = 2/149 (1%)

Query: 3   KGNVFMSCALEEAQNAALR-NEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIR 60
           +   +M  AL  A  AA   +EIPVGAV +     ++    N N    D +AHAEI+A+R
Sbjct: 10  EHTHWMRHALTLAHRAATEFDEIPVGAVLISPEGTLLGEGCNYNITSHDPSAHAEIMALR 69

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
                L    +P   LYVTLEPC MCA AI  ARI  L Y A++PK G   +        
Sbjct: 70  AAGHQLRNHRMPGCTLYVTLEPCLMCAMAIIHARIAHLIYAAADPKTGACGSTFDILNDP 129

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H   +Y G+  + + + + ++F+ +R
Sbjct: 130 RHNHHVHVYGGLLAEEASRRLTNYFRTKR 158


>gi|182678875|ref|YP_001833021.1| CMP/dCMP deaminase zinc-binding [Beijerinckia indica subsp. indica
           ATCC 9039]
 gi|182634758|gb|ACB95532.1| CMP/dCMP deaminase zinc-binding [Beijerinckia indica subsp. indica
           ATCC 9039]
          Length = 151

 Score =  188 bits (480), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 77/140 (55%), Positives = 97/140 (69%)

Query: 10  CALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQE 69
            A EEA  AA R E+PVGAV +    I++RAGN+    KD TAHAE+LAIR  C +L  E
Sbjct: 12  LAFEEAHKAAARGEVPVGAVIMREGIILARAGNQVLADKDPTAHAEMLAIRQACAVLGSE 71

Query: 70  ILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIY 129
            L   DLYVTLEPC MCAAAI+ AR+RRLY+ AS+PKGGG+E+G + +   TCHH  EIY
Sbjct: 72  RLIGCDLYVTLEPCAMCAAAIAHARLRRLYFSASDPKGGGVEHGARIFAQPTCHHVTEIY 131

Query: 130 PGISEQRSRQIIQDFFKERR 149
            G+ E  +  +++ FF ERR
Sbjct: 132 GGLRESEAAALLRAFFLERR 151


>gi|269217562|ref|ZP_06161416.1| tRNA-specific adenosine deaminase [Actinomyces sp. oral taxon 848
           str. F0332]
 gi|269212497|gb|EEZ78837.1| tRNA-specific adenosine deaminase [Actinomyces sp. oral taxon 848
           str. F0332]
          Length = 166

 Score =  188 bits (479), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 49/139 (35%), Positives = 73/139 (52%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           ++  A+E A  AAL  ++PVGA+ V  + ++    N      D   HAEI A+R   + +
Sbjct: 26  WIGRAMELADRAALAGDVPVGALVVRGSAVLGVGWNTREARNDPAGHAEIAALREAAQAV 85

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L   DLYVTLEPCTMCA AI  +R+ R+ +GA +PK G   +       A  +H  
Sbjct: 86  GDWRLEGCDLYVTLEPCTMCAGAIVASRVARVVFGAWDPKAGAAGSVRDVLRDARLNHRV 145

Query: 127 EIYPGISEQRSRQIIQDFF 145
           E+  G+ E    + ++ FF
Sbjct: 146 EVVGGVREDECSRQLRAFF 164


>gi|311065133|ref|YP_003971859.1| cytosine/adenosine deaminase [Bifidobacterium bifidum PRL2010]
 gi|310867453|gb|ADP36822.1| Cytosine/adenosine deaminase [Bifidobacterium bifidum PRL2010]
          Length = 150

 Score =  188 bits (479), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 47/143 (32%), Positives = 67/143 (46%), Gaps = 1/143 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  A+   + A  + ++PVGAV +     +I R  NR  E  D  AHAEI A+R   +  
Sbjct: 8   MCEAIALGERAGKQGDVPVGAVVLDERGTVIGRGRNRREEGHDPLAHAEIEAMREAAQAR 67

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  L VTLEPC MCA A     I R+ +GA + K G   +           H P
Sbjct: 68  GDWNLADCTLVVTLEPCPMCAGACIQTHIGRIVFGAWDAKLGACGSIWDIPRDPHVGHVP 127

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           ++  G+ E    +++  FF  RR
Sbjct: 128 QVVGGVREAACARLLTGFFASRR 150


>gi|46579939|ref|YP_010747.1| cytidine/deoxycytidylate deaminase family protein [Desulfovibrio
           vulgaris str. Hildenborough]
 gi|46449355|gb|AAS96006.1| cytidine/deoxycytidylate deaminase family protein [Desulfovibrio
           vulgaris str. Hildenborough]
          Length = 161

 Score =  188 bits (479), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 56/146 (38%), Positives = 76/146 (52%), Gaps = 1/146 (0%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
              M  AL EA+ A    E+PVGAV V    +II R  NR     D +AHAE++A+RM  
Sbjct: 14  ERLMDEALAEARLAQAEGEVPVGAVVVDKAGRIIGRGHNRCLRDNDPSAHAEMVALRMAA 73

Query: 64  RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123
              +   L    L VTLEPC MCA AI  AR+  + YGA +PK G + +  + +     +
Sbjct: 74  TTTANYRLGGTFLVVTLEPCLMCAGAIVHARVEGVVYGAEDPKAGAVTSCLEAFEQPFLN 133

Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149
           H P    G+  +    I++DFF  RR
Sbjct: 134 HRPWHMGGLRRRACTAILKDFFNGRR 159


>gi|297243273|ref|ZP_06927208.1| cytidine and deoxycytidylate deaminase [Gardnerella vaginalis AMD]
 gi|296888807|gb|EFH27544.1| cytidine and deoxycytidylate deaminase [Gardnerella vaginalis AMD]
          Length = 153

 Score =  188 bits (479), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 48/151 (31%), Positives = 75/151 (49%), Gaps = 2/151 (1%)

Query: 1   MKKGNVF-MSCALEEAQNAALRNEIPVGAVAVLNNK-IISRAGNRNRELKDVTAHAEILA 58
           M+   VF M+ AL  A+ +A   E+PVGAV +     II +  N   +  D  AHAE+LA
Sbjct: 3   MRDEIVFAMNQALNLARESASAGEVPVGAVVLDGGGNIIGKGANMREQSADPLAHAEVLA 62

Query: 59  IRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
           ++          L +  L VTLEPC MCA A+   R++R+ +GA + K G   +      
Sbjct: 63  MKDAAISRKSWNLSDCTLVVTLEPCPMCAGAVLQTRLKRVIFGAWDAKLGACGSVWDILR 122

Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
                  PE+   + E    +++++FF  +R
Sbjct: 123 DPHVGSRPEVIGSVCESECARLLRNFFAHQR 153


>gi|290959146|ref|YP_003490328.1| deaminase [Streptomyces scabiei 87.22]
 gi|260648672|emb|CBG71785.1| putative deaminase [Streptomyces scabiei 87.22]
          Length = 183

 Score =  188 bits (479), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 49/160 (30%), Positives = 73/160 (45%), Gaps = 19/160 (11%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNK--IISRAGNRNRELKDVTAHAEI--------- 56
           M  AL EA  AA   ++PVGAV +  +   +++   N      D TAHAE+         
Sbjct: 24  MRLALAEAGRAAEGGDVPVGAVVLSPDGTTVLATGHNEREATGDPTAHAEVLALRRAAAA 83

Query: 57  --------LAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGG 108
                    +   G R   +  L +  L VTLEPCTMCA A+  +RI R+ YGA + K G
Sbjct: 84  LRATGARGSSAEEGGRRTGEWRLTDCTLVVTLEPCTMCAGALVQSRIDRVVYGARDEKAG 143

Query: 109 GIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKER 148
              +          +H PE+  G+      +++ +FF+ R
Sbjct: 144 ATGSLWDVVRDRRLNHRPEVVEGVLADDCARLLTEFFRTR 183


>gi|209518682|ref|ZP_03267499.1| CMP/dCMP deaminase zinc-binding [Burkholderia sp. H160]
 gi|209500881|gb|EEA00920.1| CMP/dCMP deaminase zinc-binding [Burkholderia sp. H160]
          Length = 230

 Score =  188 bits (479), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 51/146 (34%), Positives = 76/146 (52%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           ++   FM+ A   A+      E+PVGAV V  +++I+   N      D +AHAE++A+R 
Sbjct: 57  ERDLRFMALAQAAAEEGRAAGEVPVGAVLVRGDEVIATGFNHPIGAHDPSAHAEMVALRA 116

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
             + L    LP  +LYVTLEPC MCA AI  ARI R+ +GA +PK G   +    +    
Sbjct: 117 AAQSLENYRLPGCELYVTLEPCLMCAGAIMHARISRVVFGARDPKTGACGSVVDAFANPQ 176

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKE 147
            +H   +  G+ E      ++ FF E
Sbjct: 177 LNHHTTVSGGVLEAECSAALRSFFAE 202


>gi|224541628|ref|ZP_03682167.1| hypothetical protein CATMIT_00799 [Catenibacterium mitsuokai DSM
           15897]
 gi|224525466|gb|EEF94571.1| hypothetical protein CATMIT_00799 [Catenibacterium mitsuokai DSM
           15897]
          Length = 147

 Score =  188 bits (479), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 53/147 (36%), Positives = 78/147 (53%), Gaps = 3/147 (2%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
               +M+ AL+EA+ A   +E+P+G + V   +II+R  N+   LK  T HAEILAI   
Sbjct: 2   SDEEYMAEALKEAEIAMSEDEVPIGCIIVYEGQIIARTHNQKETLKKATGHAEILAINQA 61

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
              L    L    +YVTLEPC MC  AI  +R+ RL  GA+  K  G     +       
Sbjct: 62  SEYLDLWHLDGCTMYVTLEPCMMCTGAIIQSRMSRLVIGANVSKWPGF---IELIENNPV 118

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H P++  GI +++   I+ +FFK +R
Sbjct: 119 NHHPDVQQGILKEQCATIVSEFFKRKR 145


>gi|148242392|ref|YP_001227549.1| tRNA-specific adenosine deaminase [Synechococcus sp. RCC307]
 gi|147850702|emb|CAK28196.1| tRNA-specific adenosine deaminase [Synechococcus sp. RCC307]
          Length = 183

 Score =  188 bits (479), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 49/144 (34%), Positives = 75/144 (52%), Gaps = 1/144 (0%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           +M   L  A  A  R E+PV AV +    + I    NR    +D   HAE++A+R    +
Sbjct: 27  WMDRLLRLAAKAGQRGEVPVAAVVIDPLGRAIGWGSNRREAAQDPLGHAELVALRQASSL 86

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
                  +  L VTLEPC MCA A+  AR+ R+ +GAS+PK G +       T A+ HH 
Sbjct: 87  RRDWRFNQHTLLVTLEPCPMCAGALVQARMGRVVFGASDPKRGALGGCLNLSTDASAHHH 146

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
            E+  G+  +  R+ +Q +F+++R
Sbjct: 147 MEVIGGVRGEACREQLQAWFRQQR 170


>gi|330892455|gb|EGH25116.1| cytidine/deoxycytidylate deaminase family protein [Pseudomonas
           syringae pv. mori str. 301020]
 gi|330894515|gb|EGH27176.1| cytidine/deoxycytidylate deaminase family protein [Pseudomonas
           syringae pv. mori str. 301020]
          Length = 169

 Score =  188 bits (479), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 59/148 (39%), Positives = 81/148 (54%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
            K   FM  AL  A   AL  E+PVGAV V N +II R  N      D +AHAE++A+R 
Sbjct: 10  SKDQDFMREALALAAQGALLGEVPVGAVVVQNGEIIGRGYNCPISASDPSAHAEMVAVRD 69

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
             R L    LP   LYVTLEPC+MCA  I  +R+ R+ YGA  PK G +++  QF++   
Sbjct: 70  AARALDNYRLPGSTLYVTLEPCSMCAGLIVHSRVARVVYGALEPKAGIVQSQGQFFSQGF 129

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H      G+  +    ++ +FF+ RR
Sbjct: 130 LNHRVLFEGGVLSEECGAMLSEFFRMRR 157


>gi|124008183|ref|ZP_01692880.1| cytosine deaminase [Microscilla marina ATCC 23134]
 gi|123986282|gb|EAY26104.1| cytosine deaminase [Microscilla marina ATCC 23134]
          Length = 154

 Score =  188 bits (479), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 61/151 (40%), Positives = 86/151 (56%), Gaps = 5/151 (3%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
              +M  A +EA  A  + EIPVGAV V+ +KII+RA N+  +L DVTAHAEILA+    
Sbjct: 3   DEFYMQQAYKEAVIAYNKGEIPVGAVVVVQDKIIARAHNQTEQLLDVTAHAEILAVTGAA 62

Query: 64  RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG--IEN---GTQFYT 118
             L  + L +  +YVTLEPC MCA AI+ +++ RL +GA + K G   IE+   GT    
Sbjct: 63  NYLGAKYLNQCTMYVTLEPCVMCAGAIAWSQLGRLVFGAYDVKRGFSRIESATEGTNNKV 122

Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
               H       G+ E    +++Q FF++ R
Sbjct: 123 TKLLHPKTLQVGGVLENECAELLQRFFQKLR 153


>gi|254252116|ref|ZP_04945434.1| Cytidine/deoxycytidylate deaminase [Burkholderia dolosa AUO158]
 gi|124894725|gb|EAY68605.1| Cytidine/deoxycytidylate deaminase [Burkholderia dolosa AUO158]
          Length = 206

 Score =  188 bits (479), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 53/143 (37%), Positives = 75/143 (52%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
           +   FM  A   A+ A    E+PVGAV V  +++I+R  N      D +AHAE+ A+RM 
Sbjct: 43  RDAHFMRLAQAAAEEARAAGEVPVGAVLVRGDEVIARGFNHPIGGHDPSAHAEMAALRMA 102

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
            + L    +P  +LYVTLEPC MCA AI  ARI R+ YGA +PK G   +    +     
Sbjct: 103 AQRLQNYRMPGCELYVTLEPCLMCAGAIMHARIARVVYGAPDPKTGACGSVIDAFANTQL 162

Query: 123 HHSPEIYPGISEQRSRQIIQDFF 145
           +H  E+  G+        ++ FF
Sbjct: 163 NHHAEVIGGVLADECGAALKSFF 185


>gi|257487178|ref|ZP_05641219.1| cytidine/deoxycytidylate deaminase family protein [Pseudomonas
           syringae pv. tabaci ATCC 11528]
 gi|331009206|gb|EGH89262.1| cytidine/deoxycytidylate deaminase family protein [Pseudomonas
           syringae pv. tabaci ATCC 11528]
          Length = 169

 Score =  188 bits (479), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 59/148 (39%), Positives = 81/148 (54%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
            K   FM  AL  A   AL  E+PVGAV V N +II R  N      D +AHAE++A+R 
Sbjct: 10  SKDQDFMREALALAAQGALLGEVPVGAVVVQNGEIIGRGYNCPISASDPSAHAEMVAVRD 69

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
             R L    LP   LYVTLEPC+MCA  I  +R+ R+ YGA  PK G +++  QF++   
Sbjct: 70  AARALDNYRLPGSTLYVTLEPCSMCAGLIVHSRVARVVYGALEPKAGIVQSQGQFFSQGF 129

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H      G+  +    ++ +FF+ RR
Sbjct: 130 LNHRVLFEGGVLSEECGAMLSEFFRMRR 157


>gi|152989527|ref|YP_001346733.1| hypothetical protein PSPA7_1349 [Pseudomonas aeruginosa PA7]
 gi|150964685|gb|ABR86710.1| conserved hypothetical protein [Pseudomonas aeruginosa PA7]
          Length = 182

 Score =  188 bits (478), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 59/148 (39%), Positives = 80/148 (54%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
            +   FM  AL EA+ AA   E+PVGAV V   +II R  N+     D +AHAE++AIRM
Sbjct: 26  SRDPHFMREALAEAEKAAALGEVPVGAVLVREGEIIGRGFNQPISSHDPSAHAEMVAIRM 85

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
                    LP   LYVTLEPC MC+  +  ARI+RL YG   PK G +E+  +F+    
Sbjct: 86  AAAEAGNYRLPGSTLYVTLEPCGMCSGLLVHARIQRLVYGTLEPKSGAVESRGRFFEQEH 145

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H   +  G+  +   Q +  FF+ RR
Sbjct: 146 LNHRVMVEGGVLAEECSQALSAFFRARR 173


>gi|298252974|ref|ZP_06976766.1| cytidine and deoxycytidylate deaminase [Gardnerella vaginalis 5-1]
 gi|297532369|gb|EFH71255.1| cytidine and deoxycytidylate deaminase [Gardnerella vaginalis 5-1]
          Length = 153

 Score =  188 bits (478), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 2/151 (1%)

Query: 1   MKKGNVF-MSCALEEAQNAALRNEIPVGAVAVLNNK-IISRAGNRNRELKDVTAHAEILA 58
           M+   VF M+ AL  A+ +A   E+PVGAV +     II +  N   +  D  AHAE+LA
Sbjct: 3   MRDEIVFAMNQALNLARESASAGEVPVGAVVLDGGGNIIGKGANMREQSADPLAHAEVLA 62

Query: 59  IRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
           ++          L +  L VTLEPC MCA A+   R++R+ +GA + K G   +      
Sbjct: 63  MKDAAASRKSWNLSDCTLVVTLEPCPMCAGAVLQTRLKRVIFGAWDAKLGACGSVWDILR 122

Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
                  PE+   + E    Q +++FF  +R
Sbjct: 123 DPHVGSRPEVIGSVCESECAQPLRNFFAHQR 153


>gi|259650544|dbj|BAI42706.1| putative cytosine/adenosine deaminase [Lactobacillus rhamnosus GG]
          Length = 170

 Score =  188 bits (478), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 52/128 (40%), Positives = 69/128 (53%)

Query: 22  NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81
            E+P+GAV V + +II R  N     +D T HAEILAI+  CR L    L +  L+VTLE
Sbjct: 26  GEVPIGAVVVHDQQIIGRGYNLRETTQDATQHAEILAIQAACRQLGTWRLEDCSLFVTLE 85

Query: 82  PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141
           PC MCA  +  ARI   Y+GA++PK G              +H   + PGI    S  ++
Sbjct: 86  PCPMCAGTMINARIATCYFGATDPKAGVAGTFYNLLEDTRFNHQVAVVPGIQAIASAALL 145

Query: 142 QDFFKERR 149
           QDFF+  R
Sbjct: 146 QDFFRAIR 153


>gi|298714567|emb|CBJ27558.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 504

 Score =  188 bits (478), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 45/156 (28%), Positives = 73/156 (46%), Gaps = 8/156 (5%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAV------LNNK--IISRAGNRNRELKDVTAH 53
           +  + FM  AL  A  A +  E+P+GA+         + +  ++S   N     +D +AH
Sbjct: 333 EDDDRFMRMALRLAGRARMEGEVPIGAILAETVPTRRDGRRRVLSTGRNEVEGRRDASAH 392

Query: 54  AEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENG 113
           AE+L ++   +  S   L    LYVT+EPC MC +A  L R+ R+ +GA NP  G     
Sbjct: 393 AEMLCLQAAAKARSNWRLAGTTLYVTVEPCAMCLSAAQLFRVDRVVFGAPNPNLGACGGW 452

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
               +     H  E+  G+  +     ++ FF+ RR
Sbjct: 453 VDLSSQRHAFHELEVKGGVLAEECALPLRGFFRSRR 488


>gi|319898379|ref|YP_004158472.1| Cytosine/adenosine deaminase [Bartonella clarridgeiae 73]
 gi|319402343|emb|CBI75882.1| Cytosine/adenosine deaminase [Bartonella clarridgeiae 73]
          Length = 150

 Score =  188 bits (478), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 75/142 (52%), Positives = 94/142 (66%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  AL EAQ+A  + EIPVGAV      II+RAGN  +   D T HAE+  IR+ C+I  
Sbjct: 6   MEIALLEAQSAKKQAEIPVGAVITHGKTIIARAGNYIKTPYDPTGHAEMRVIRIACQIFK 65

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
            E +PE DLYVTLEPC MCAAAIS ARIR LYY   + KGG IE+G +FY   TCHH P 
Sbjct: 66  SERIPECDLYVTLEPCAMCAAAISFARIRNLYYATQDSKGGAIEHGPRFYQQPTCHHRPN 125

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
           +Y G  E+ +  +++DFF ++R
Sbjct: 126 VYSGFKEREATLLLKDFFSQKR 147


>gi|303320905|ref|XP_003070447.1| Cytidine and deoxycytidylate deaminase zinc-binding domain
           containing protein [Coccidioides posadasii C735 delta
           SOWgp]
 gi|240110143|gb|EER28302.1| Cytidine and deoxycytidylate deaminase zinc-binding domain
           containing protein [Coccidioides posadasii C735 delta
           SOWgp]
 gi|320033053|gb|EFW15002.1| tRNA-specific adenosine deaminase subunit TAD2 [Coccidioides
           posadasii str. Silveira]
          Length = 207

 Score =  188 bits (478), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 47/144 (32%), Positives = 69/144 (47%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
              FM  AL+ A+ A    E PVG V V + K+I R  N      + T HAE LAI    
Sbjct: 28  HEQFMREALQMAEQALAIGETPVGCVLVHDGKVIGRGMNDTNRSLNGTRHAEFLAIEEAL 87

Query: 64  RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123
           R   + I    DLYVT+EPC MCA+ +    IRR+++G  N + GG       ++     
Sbjct: 88  RSYPRSIFRTTDLYVTVEPCIMCASLLRQNYIRRVFFGCVNDRFGGTGGVLNLHSDRAID 147

Query: 124 HSPEIYPGISEQRSRQIIQDFFKE 147
               +Y GI    +  +++ F+ +
Sbjct: 148 PPYTVYGGIFRNEAIMLLRRFYIQ 171


>gi|217979352|ref|YP_002363499.1| CMP/dCMP deaminase zinc-binding [Methylocella silvestris BL2]
 gi|217504728|gb|ACK52137.1| CMP/dCMP deaminase zinc-binding [Methylocella silvestris BL2]
          Length = 146

 Score =  188 bits (478), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 70/129 (54%), Positives = 90/129 (69%)

Query: 21  RNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80
           R E+PVGAV V +  I++RAGNR     D TAHAE+L IR   R L  + L   DLYVTL
Sbjct: 18  RGEVPVGAVIVRDGAILARAGNRTLADDDPTAHAEMLTIRAAARALGSQRLAGCDLYVTL 77

Query: 81  EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140
           EPC MCAAAIS AR+RRLY+ A +PKGG +E+G +F+   TCHH+PE+Y G+   +S  +
Sbjct: 78  EPCAMCAAAISFARVRRLYFAALDPKGGAVEHGPRFFAQPTCHHAPEVYEGLRASQSADL 137

Query: 141 IQDFFKERR 149
           ++ FF ERR
Sbjct: 138 LRRFFAERR 146


>gi|294790273|ref|ZP_06755431.1| tRNA-specific adenosine deaminase [Scardovia inopinata F0304]
 gi|294458170|gb|EFG26523.1| tRNA-specific adenosine deaminase [Scardovia inopinata F0304]
          Length = 185

 Score =  188 bits (478), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 46/148 (31%), Positives = 72/148 (48%), Gaps = 1/148 (0%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRM 61
                M+ AL+ A  AA   ++PVGAV + N  ++IS+  N+ +   D  +HAEI A+R 
Sbjct: 34  SDEQAMALALKNAVRAAQAGDVPVGAVLLDNRGRLISQGYNQRQARADPLSHAEIEALRA 93

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
             ++     L    L VT+EPC MCA A     + R+ +G  +PK G   +         
Sbjct: 94  AGQVKGDWNLAGCSLIVTMEPCPMCAGAAVSVHLGRIVFGTWDPKMGACGSVWDIPRDPH 153

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
               PE+  GI  Q   +++  FF++ R
Sbjct: 154 VGSQPEVVGGILRQDCSRLLSHFFQKTR 181


>gi|15837614|ref|NP_298302.1| hypothetical protein XF1012 [Xylella fastidiosa 9a5c]
 gi|9105950|gb|AAF83822.1|AE003939_1 conserved hypothetical protein [Xylella fastidiosa 9a5c]
          Length = 167

 Score =  188 bits (478), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 52/149 (34%), Positives = 76/149 (51%), Gaps = 2/149 (1%)

Query: 3   KGNVFMSCALEEAQNAALR-NEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIR 60
           +   +M  AL  A  AA   +EIPVGAV +     ++    N N    D +AHAEI+A+R
Sbjct: 12  EHIHWMRHALTLAHRAATEFDEIPVGAVLISPEGTLLGEGWNYNITSHDPSAHAEIMALR 71

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
                L    +P   LYVTLEPC MCA AI  ARI  L Y A++PK G   +        
Sbjct: 72  AAGHQLRNHRMPGCTLYVTLEPCLMCAMAIIHARIAHLIYAAADPKTGACGSTFDILNDP 131

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H   +Y G+  + + + + ++F+ +R
Sbjct: 132 RHNHHVHVYGGLLAEEASRRLTNYFRTKR 160


>gi|256545480|ref|ZP_05472842.1| tRNA-specific adenosine deaminase [Anaerococcus vaginalis ATCC
           51170]
 gi|256398876|gb|EEU12491.1| tRNA-specific adenosine deaminase [Anaerococcus vaginalis ATCC
           51170]
          Length = 157

 Score =  188 bits (478), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 50/143 (34%), Positives = 80/143 (55%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
               +M  A+ EA+ A L +E+P+G V V + KII+R+ N   + K    HAEILAI   
Sbjct: 2   DDIFYMKEAINEAKLARLEDEVPIGCVIVKDEKIIARSHNYTYKGKSALKHAEILAIDKA 61

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
            + +    L +  +YVT+EPC+MCA AI  +RI+RL  G ++ K G   + T      + 
Sbjct: 62  SKYVGDFRLEDCTMYVTMEPCSMCAGAIINSRIKRLVIGLADVKRGACGSNTNITGDRSQ 121

Query: 123 HHSPEIYPGISEQRSRQIIQDFF 145
            H  +   G+ ++ S +++Q+FF
Sbjct: 122 LHYLDAEFGLMKEESLELLQNFF 144


>gi|312879894|ref|ZP_07739694.1| tRNA-adenosine deaminase [Aminomonas paucivorans DSM 12260]
 gi|310783185|gb|EFQ23583.1| tRNA-adenosine deaminase [Aminomonas paucivorans DSM 12260]
          Length = 152

 Score =  188 bits (478), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 56/142 (39%), Positives = 75/142 (52%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  AL EA+ A    EIPVGAVAV + +I+ R  NR +  +   AHAE+ A+R  C  L 
Sbjct: 1   MGEALAEARLALEEGEIPVGAVAVDHGRIVGRGRNRRKLQEAPFAHAEMEALRDACASLG 60

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
              L  V LYVTLEPC MCA AI   R+ RL +GA +P+ G   +           H   
Sbjct: 61  TWRLDGVTLYVTLEPCPMCAGAILQTRVGRLVFGARDPRAGACGSLVDLLRDPRQTHRCR 120

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
           +  G+  + +  ++ DFF  RR
Sbjct: 121 VREGVGREEAACLLGDFFLLRR 142


>gi|317055943|ref|YP_004104410.1| CMP/dCMP deaminase zinc-binding protein [Ruminococcus albus 7]
 gi|315448212|gb|ADU21776.1| CMP/dCMP deaminase zinc-binding protein [Ruminococcus albus 7]
          Length = 158

 Score =  188 bits (478), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 55/151 (36%), Positives = 81/151 (53%), Gaps = 3/151 (1%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLN--NKIISRAGNRNRELKDVTAHAEILA 58
           M +  ++M  ALE A  AA  +E+PVGAV V     +I+ R  NR    +    HAEI+A
Sbjct: 1   MTRDEMYMRKALELAALAADEDEVPVGAVVVKKSTGEIVGRGFNRREYGRSPLTHAEIVA 60

Query: 59  IRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
           I    R L    L + +L+VTLEPC MCA A+  +R+ R+ +GA + K G   +    + 
Sbjct: 61  IDEASRKLGGWRLIDCELFVTLEPCPMCAGAVINSRVERVVFGAYDKKAGSCGSVVDLFG 120

Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
           L   +H PE   G+ E+    ++ +FFK  R
Sbjct: 121 LPY-NHKPECIGGVLEEECAAVLTEFFKGLR 150


>gi|256831602|ref|YP_003160329.1| CMP/dCMP deaminase zinc-binding [Jonesia denitrificans DSM 20603]
 gi|256685133|gb|ACV08026.1| CMP/dCMP deaminase zinc-binding [Jonesia denitrificans DSM 20603]
          Length = 154

 Score =  188 bits (478), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 58/146 (39%), Positives = 75/146 (51%), Gaps = 4/146 (2%)

Query: 8   MSCALEEAQNAA-LRN--EIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
           M  AL EA+ A  L    ++P+GAV +  +   I+ A N     +D TAHAEILAIR   
Sbjct: 1   MDDALTEARRALRLHGPPDVPIGAVIIDAHGHTIAAAHNERELTQDPTAHAEILAIRKAA 60

Query: 64  RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123
             L    L +  L VTLEPC MCA AI LARI R+  GA +PK G   +          +
Sbjct: 61  THLGTWRLDQCTLVVTLEPCAMCAGAIVLARIPRIVIGAWDPKAGATGSVFDIVRAPQLN 120

Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149
           H  E+ PGI    S  ++ +FF   R
Sbjct: 121 HFVEVIPGIRAADSATLLTEFFATHR 146


>gi|139439263|ref|ZP_01772705.1| Hypothetical protein COLAER_01720 [Collinsella aerofaciens ATCC
           25986]
 gi|133775287|gb|EBA39107.1| Hypothetical protein COLAER_01720 [Collinsella aerofaciens ATCC
           25986]
          Length = 593

 Score =  188 bits (478), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 51/146 (34%), Positives = 78/146 (53%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
              FMS AL EA+ AA   E+P+GAV V   +I++RA NR    +D +AHAE  A+    
Sbjct: 7   DEKFMSEALAEARAAAAVGEVPIGAVVVRAGEIVARAHNRRELDQDPSAHAEFSALCAAA 66

Query: 64  RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123
           + L +  L +  +YVTLEPC MCA  +  AR+ R  YGA++ K G + +       +  +
Sbjct: 67  QSLGRWRLSDCTVYVTLEPCCMCAGLMVNARVGRCVYGAADAKAGALGSLYDLNADSRLN 126

Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149
           H   +  G+     R+++  +F   R
Sbjct: 127 HRFNVRAGVLADECREVLSSYFSGLR 152


>gi|320009620|gb|ADW04470.1| CMP/dCMP deaminase zinc-binding protein [Streptomyces flavogriseus
           ATCC 33331]
          Length = 142

 Score =  187 bits (477), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 52/142 (36%), Positives = 74/142 (52%), Gaps = 1/142 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  AL+EA  AA   ++PVGAV +  +  +++   N      D TAHAE+LA+R     L
Sbjct: 1   MRQALDEAAQAASAGDVPVGAVVLGPDGALLATGHNEREASHDPTAHAEVLALRRAAAAL 60

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L    L VTLEPCTMCA A+  +R+ R+ YGA + K G   +          +H P
Sbjct: 61  GSWRLTGCTLVVTLEPCTMCAGALVQSRVARVVYGARDEKAGAAGSLWDVVRDRRLNHRP 120

Query: 127 EIYPGISEQRSRQIIQDFFKER 148
           E+  G+ E     ++  FF+ER
Sbjct: 121 EVIHGVLEDLCADLLTAFFRER 142


>gi|291295391|ref|YP_003506789.1| tRNA(Ile)-lysidine synthetase [Meiothermus ruber DSM 1279]
 gi|290470350|gb|ADD27769.1| tRNA(Ile)-lysidine synthetase [Meiothermus ruber DSM 1279]
          Length = 521

 Score =  187 bits (477), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 50/148 (33%), Positives = 81/148 (54%), Gaps = 7/148 (4%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
            +    M  ALE+A+ A    E+P+GAV V + ++++ A N+  +  D TAHAE+LA++ 
Sbjct: 378 SEDLEHMRSALEQARLAQQAGEVPIGAVVVWDGEVLAEAHNQVEQQCDATAHAELLALQQ 437

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
                  ++LP   +YVTLEPC MC  A+  A++RR+ Y   N K G +       T+  
Sbjct: 438 ALHKRHSKVLPGATVYVTLEPCPMCFGALMEAQVRRVVYAVENLKAGAV-------TVHR 490

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
                E   G  E+ S ++++DFF ++R
Sbjct: 491 MKPPFEWEGGWLERESAKLLRDFFSQKR 518


>gi|254384103|ref|ZP_04999448.1| cytidine/deoxycytidine deaminase [Streptomyces sp. Mg1]
 gi|194342993|gb|EDX23959.1| cytidine/deoxycytidine deaminase [Streptomyces sp. Mg1]
          Length = 142

 Score =  187 bits (477), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 50/142 (35%), Positives = 74/142 (52%), Gaps = 1/142 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  AL EA  A    ++PVGAV +  + ++++   N      D TAHAE+LA+R     L
Sbjct: 1   MRLALREAARAVPAGDVPVGAVVLGPDGELLATGYNEREATGDPTAHAEVLALRRAAAAL 60

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
            +  LP   L VTLEPC MCA A+  AR+ R+ YGA + K G   +          +H P
Sbjct: 61  GEWRLPGCTLVVTLEPCVMCAGALVQARVARVVYGAGDEKAGAAGSLWDLVRDRRLNHRP 120

Query: 127 EIYPGISEQRSRQIIQDFFKER 148
           E+  G+  +   + + DFF++ 
Sbjct: 121 EVIRGVLAEECARQLTDFFRDL 142


>gi|161524475|ref|YP_001579487.1| CMP/dCMP deaminase zinc-binding [Burkholderia multivorans ATCC
           17616]
 gi|221215505|ref|ZP_03588469.1| tRNA-specific adenosine deaminase [Burkholderia multivorans CGD1]
 gi|160341904|gb|ABX14990.1| CMP/dCMP deaminase zinc-binding [Burkholderia multivorans ATCC
           17616]
 gi|221164689|gb|EED97171.1| tRNA-specific adenosine deaminase [Burkholderia multivorans CGD1]
          Length = 187

 Score =  187 bits (477), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 53/145 (36%), Positives = 78/145 (53%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
           +   FM  AL  A+ A    E+PVGAV V  +++++R  N      D +AHAE+ A+RM 
Sbjct: 24  RDVHFMRLALAAAEEARAAGEVPVGAVLVRGDEVLARGFNHPIGGHDPSAHAEMAALRMA 83

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
            + L    +P  +LYVTLEPC MCA AI  ARI R+ +GA++PK G   +    +     
Sbjct: 84  AQHLQNYRMPGCELYVTLEPCLMCAGAIMHARIARVVFGAADPKTGVCGSVMDAFANPQL 143

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKE 147
           +H  E+  G+        ++ FF E
Sbjct: 144 NHHTEVVGGVLAHECGAALKSFFAE 168


>gi|224283917|ref|ZP_03647239.1| Cytosine/adenosine deaminase [Bifidobacterium bifidum NCIMB 41171]
 gi|313141068|ref|ZP_07803261.1| cytosine/adenosine deaminase [Bifidobacterium bifidum NCIMB 41171]
 gi|313133578|gb|EFR51195.1| cytosine/adenosine deaminase [Bifidobacterium bifidum NCIMB 41171]
          Length = 150

 Score =  187 bits (477), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 46/143 (32%), Positives = 66/143 (46%), Gaps = 1/143 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  A+   + A  + ++PVGAV +     +I R  NR     D  AHAEI A+R   +  
Sbjct: 8   MCEAIALGERAGKQGDVPVGAVVLDERGTVIGRGRNRREAGHDPLAHAEIEAMREAAQAR 67

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  L VTLEPC MCA A     I R+ +GA + K G   +           H P
Sbjct: 68  GDWNLADCTLVVTLEPCPMCAGACIQTHIGRIVFGAWDAKLGACGSIWDIPRDPHVGHVP 127

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           ++  G+ E    +++  FF  RR
Sbjct: 128 QVVGGVREAACARLLTGFFASRR 150


>gi|283783769|ref|YP_003374523.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Gardnerella vaginalis 409-05]
 gi|283442021|gb|ADB14487.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Gardnerella vaginalis 409-05]
          Length = 153

 Score =  187 bits (477), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 49/151 (32%), Positives = 73/151 (48%), Gaps = 2/151 (1%)

Query: 1   MKKGNVF-MSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILA 58
           M+   VF M+ AL  A+ +A   E+PVGAV +     II +  N   +  D  AHAE+LA
Sbjct: 3   MRDEIVFAMNQALNLARESASAGEVPVGAVVLDGSGNIIGKGANMREQSADPLAHAEVLA 62

Query: 59  IRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
           ++          L +  L VTLEPC MCA A+   R++R+ +GA + K G   +      
Sbjct: 63  MKDAATSRKSWNLSDCTLVVTLEPCPMCAGAVLQTRLKRVIFGAWDAKLGACGSVWDILR 122

Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
                  PE+   + E    Q ++ FF  +R
Sbjct: 123 DPHVGSRPEVIGSVCEPECAQPLRTFFAHQR 153


>gi|254293360|ref|YP_003059383.1| CMP/dCMP deaminase zinc-binding [Hirschia baltica ATCC 49814]
 gi|254041891|gb|ACT58686.1| CMP/dCMP deaminase zinc-binding [Hirschia baltica ATCC 49814]
          Length = 154

 Score =  187 bits (477), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 64/154 (41%), Positives = 92/154 (59%), Gaps = 5/154 (3%)

Query: 1   MKKGNV--FMSCALEEAQNAALRNEIPVGAVAVLN--NKIISRAGNRNRELKDVTAHAEI 56
           MK+     +M+ A++ A+ AAL  E+PVGAV V      I+    N      D TAHAEI
Sbjct: 1   MKEAEQMPYMARAMQLAEEAALAGEVPVGAVIVDPSTGNIVGEGRNGPIGAHDPTAHAEI 60

Query: 57  LAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116
           +AIR  C  +    LP+++LYVTLEPC MCA AIS ARI ++ + A +PKGG I++G +F
Sbjct: 61  VAIRNACASVDNYRLPDLELYVTLEPCAMCAGAISFARIGKVVFAADDPKGGAIKHGPKF 120

Query: 117 YTLATCHHSPEIYPGIS-EQRSRQIIQDFFKERR 149
           +  +TCH   +    I     + ++++ FFK RR
Sbjct: 121 FEQSTCHWRSQWEQDIRFASEAGEMLRAFFKSRR 154


>gi|254390387|ref|ZP_05005604.1| deaminase [Streptomyces clavuligerus ATCC 27064]
 gi|197704091|gb|EDY49903.1| deaminase [Streptomyces clavuligerus ATCC 27064]
          Length = 142

 Score =  187 bits (477), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 47/128 (36%), Positives = 70/128 (54%), Gaps = 1/128 (0%)

Query: 22  NEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80
            ++PVGAV +  +   ++   N      D TAHAE+LAIR   R +    L +  L VTL
Sbjct: 15  GDVPVGAVVLAADGTRLATGHNERELTGDPTAHAEVLAIRRAARRIGGWRLSDCTLVVTL 74

Query: 81  EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140
           EPCTMCA AI+ +R+ R+ YGA + K G + +          +H PE+  G+ E    ++
Sbjct: 75  EPCTMCAGAITQSRVGRVVYGARDEKAGAVGSLWDVVRDRRLNHRPEVIIGVLEPECARL 134

Query: 141 IQDFFKER 148
           + DFF+ R
Sbjct: 135 MTDFFRHR 142


>gi|56551192|ref|YP_162031.1| CMP/dCMP deaminase zinc-binding protein [Zymomonas mobilis subsp.
           mobilis ZM4]
 gi|260753167|ref|YP_003226060.1| CMP/dCMP deaminase zinc-binding [Zymomonas mobilis subsp. mobilis
           NCIMB 11163]
 gi|9931341|gb|AAG02151.1|AF212041_7 nitrogen fixation protein [Zymomonas mobilis subsp. mobilis ZM4]
 gi|56542766|gb|AAV88920.1| CMP/dCMP deaminase zinc-binding protein [Zymomonas mobilis subsp.
           mobilis ZM4]
 gi|258552530|gb|ACV75476.1| CMP/dCMP deaminase zinc-binding protein [Zymomonas mobilis subsp.
           mobilis NCIMB 11163]
          Length = 160

 Score =  187 bits (477), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 66/143 (46%), Positives = 95/143 (66%), Gaps = 1/143 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNREL-KDVTAHAEILAIRMGCRIL 66
           M  AL +A++AA + E+PVGAV     KII+ AGN  +    D T HAE+ A+R    +L
Sbjct: 17  MRQALLQAESAAHQGEVPVGAVVTFKGKIIAVAGNAMQPPFIDPTGHAEVRALRQAASVL 76

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L + DL+VTLEPC MCA AI+ ARIRRLYYGA +PKGG + +G + +   +CHH P
Sbjct: 77  GSSRLDQCDLWVTLEPCAMCAGAIATARIRRLYYGADDPKGGAVLSGVRLFFQPSCHHQP 136

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           EIY  +  +++ ++++ FFK++R
Sbjct: 137 EIYNDLGSRKASELLRQFFKQKR 159


>gi|262375359|ref|ZP_06068592.1| conserved hypothetical protein [Acinetobacter lwoffii SH145]
 gi|262309613|gb|EEY90743.1| conserved hypothetical protein [Acinetobacter lwoffii SH145]
          Length = 171

 Score =  187 bits (476), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 57/148 (38%), Positives = 81/148 (54%), Gaps = 1/148 (0%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
               +M  A E+A  AA + EIPVGA+ V  N+II +  N    L D TAHAEI+A+R  
Sbjct: 7   TDEYWMQRAYEQAALAAAQGEIPVGAIIVSQNQIIGQGFNAPISLNDPTAHAEIVALRDA 66

Query: 63  CRILSQEILP-EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
           C+ +    LP +  LYVTLEPCTMC  A+  +R+ R+ +GA   K G + +  Q +    
Sbjct: 67  CQNIQNYRLPDDAVLYVTLEPCTMCVGALVHSRVSRVVFGAFEAKAGSLVSARQLFETGY 126

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H      G  +Q+  + +  FFK RR
Sbjct: 127 YNHVFPFQAGCMQQQCSEQLSAFFKLRR 154


>gi|114320177|ref|YP_741860.1| tRNA-adenosine deaminase [Alkalilimnicola ehrlichii MLHE-1]
 gi|114226571|gb|ABI56370.1| tRNA-adenosine deaminase [Alkalilimnicola ehrlichii MLHE-1]
          Length = 164

 Score =  187 bits (476), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 49/137 (35%), Positives = 73/137 (53%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
           +   +M  AL  A  A    E+PVGAV VL+++ ++   N+    +D TAHAE++A+R  
Sbjct: 14  EDIRWMRRALALADQAEAAGEVPVGAVLVLDDREVAVGSNQPITARDPTAHAEVVALRRA 73

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
             +L    L    LYVTLEPCTMC  AI  AR++R+ + AS+PK G   +          
Sbjct: 74  GEVLGAYRLSGTTLYVTLEPCTMCIGAIIHARVKRVVFAASDPKTGACGSVFALADAPEH 133

Query: 123 HHSPEIYPGISEQRSRQ 139
           +H PE+  G+    +  
Sbjct: 134 NHHPEVVGGLLATEAGD 150


>gi|83647619|ref|YP_436054.1| cytosine/adenosine deaminases [Hahella chejuensis KCTC 2396]
 gi|83635662|gb|ABC31629.1| Cytosine/adenosine deaminases [Hahella chejuensis KCTC 2396]
          Length = 156

 Score =  187 bits (476), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 47/128 (36%), Positives = 68/128 (53%)

Query: 22  NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81
           +E+PVGA+ V + +++    N+     D TAHAEI AIR    +     LP   LYVTLE
Sbjct: 15  DEVPVGAILVRDGQVLGEGWNQPIRSHDPTAHAEISAIRKASAVAGNYRLPGSTLYVTLE 74

Query: 82  PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141
           PC MC  A+  AR+ RL +GA   K G + + ++       +   E   G+ EQ   Q++
Sbjct: 75  PCVMCLGALVHARVSRLVFGAYEHKAGAVCSSSRLLDEHNFNWKLEWSGGVLEQPCSQLL 134

Query: 142 QDFFKERR 149
             FF+ RR
Sbjct: 135 SGFFQRRR 142


>gi|315503317|ref|YP_004082204.1| cmp/dcmp deaminase zinc-binding protein [Micromonospora sp. L5]
 gi|315409936|gb|ADU08053.1| CMP/dCMP deaminase zinc-binding protein [Micromonospora sp. L5]
          Length = 208

 Score =  187 bits (476), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 52/151 (34%), Positives = 78/151 (51%), Gaps = 6/151 (3%)

Query: 2   KKGNVFMSCALEEAQNAALRNE-----IPVGAVAV-LNNKIISRAGNRNRELKDVTAHAE 55
           ++  ++M  ALE A             +PVGAV    +   ++   N      D TAHAE
Sbjct: 58  QRHELWMRRALEVAVTGPDDATPDADDVPVGAVLYGPDGAELAIGRNERELTGDPTAHAE 117

Query: 56  ILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
           +LA+R   + L +  L +  L VTLEPCTMCA AI+LAR+  + +GA  PK G + +   
Sbjct: 118 VLALRRAAQRLGRWRLDDCTLVVTLEPCTMCAGAIALARVSTVVFGAWEPKTGAVGSLWD 177

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
                   H PE+Y G+ E+ S  +++ FF+
Sbjct: 178 VLRDRRVTHRPEVYGGVLERESATLLRAFFR 208


>gi|254499275|ref|ZP_05111951.1| deaminase [Legionella drancourtii LLAP12]
 gi|254351519|gb|EET10378.1| deaminase [Legionella drancourtii LLAP12]
          Length = 143

 Score =  187 bits (476), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 49/143 (34%), Positives = 70/143 (48%), Gaps = 1/143 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  A E+A  A    E+PVGAV V N  +++  + N  +   D + HAE+  IR   + L
Sbjct: 1   MQQAYEQAFLAQNEGEVPVGAVLVSNEGELLGASRNAVQNSHDPSDHAEVRVIRQAAQQL 60

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  LYVTLEPC MCA  I  ARI+R+ +   + K G   +          +H  
Sbjct: 61  KNHRLLDTTLYVTLEPCPMCAGLIVHARIKRVVFATRDFKAGAAGSVYNLLQGYPLNHKV 120

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           +I  GI +     ++ DFFK  R
Sbjct: 121 QIDEGIMQSECALLLSDFFKACR 143


>gi|332654745|ref|ZP_08420487.1| cytidine/deoxycytidylate deaminase family protein [Ruminococcaceae
           bacterium D16]
 gi|332516088|gb|EGJ45696.1| cytidine/deoxycytidylate deaminase family protein [Ruminococcaceae
           bacterium D16]
          Length = 152

 Score =  187 bits (475), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 53/129 (41%), Positives = 69/129 (53%), Gaps = 1/129 (0%)

Query: 21  RNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80
             ++PVG V V + KI+    NR  E  D TAHAE+ AIR  C  L    L    LYVTL
Sbjct: 20  HGDVPVGCVIVKDGKIVGEGRNRREEHGDATAHAELEAIRDACARLGSWRLHGCTLYVTL 79

Query: 81  EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140
           EPC MCA  I  +RI  + YGA + K G   +    +     +H P IY G  E + ++I
Sbjct: 80  EPCPMCAGGIINSRIETVRYGARDEKAGCCSSVLNLFEE-RFNHHPRIYRGPLEPQCQKI 138

Query: 141 IQDFFKERR 149
           +QDFF + R
Sbjct: 139 LQDFFLDLR 147


>gi|189468213|ref|ZP_03016998.1| hypothetical protein BACINT_04609 [Bacteroides intestinalis DSM
           17393]
 gi|189436477|gb|EDV05462.1| hypothetical protein BACINT_04609 [Bacteroides intestinalis DSM
           17393]
          Length = 139

 Score =  187 bits (475), Expect = 6e-46,   Method: Composition-based stats.
 Identities = 60/142 (42%), Positives = 78/142 (54%), Gaps = 5/142 (3%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  AL EA+ AA R E+PVGA+ V   +II+RA N    L DVTAHAE+ AI      L 
Sbjct: 1   MKQALVEARKAAERGEVPVGAIVVCKERIIARAHNLTETLTDVTAHAEMQAITAAASTLG 60

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
            + L E  LYVT+EPC MCA AI+ A++ RL +GA + K G      Q Y     H    
Sbjct: 61  GKYLNECTLYVTVEPCVMCAGAIAWAQMGRLVFGAEDEKRG-----YQRYAPQALHPKTV 115

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
           +  GI       +++DFF  +R
Sbjct: 116 VVKGILADDCAALMKDFFAAKR 137


>gi|292572491|gb|ADE30406.1| Cytosine deaminase [Rickettsia prowazekii Rp22]
          Length = 163

 Score =  187 bits (475), Expect = 6e-46,   Method: Composition-based stats.
 Identities = 67/148 (45%), Positives = 98/148 (66%), Gaps = 2/148 (1%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVL--NNKIISRAGNRNRELKDVTAHAEILAIRM 61
            N FM  AL++A+ A  +NE+PVG V V   N KII  + N   E K+   HAEI+AI  
Sbjct: 12  NNFFMEQALKQARLAFDKNEVPVGVVIVCRLNQKIIVSSHNNIEEKKNPLCHAEIIAINT 71

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
            C ++S + L + D+YVTLEPC MCA+AIS +R++RL+YGAS+ K G +E+  +++   +
Sbjct: 72  ACNLISSKNLNDYDIYVTLEPCAMCASAISHSRLKRLFYGASDSKHGAVESNLRYFNSNS 131

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
           C + PEIY GI  + SR ++Q+FF+  R
Sbjct: 132 CFYRPEIYSGILSEHSRFLMQEFFQRIR 159


>gi|299770395|ref|YP_003732421.1| putative deaminase [Acinetobacter sp. DR1]
 gi|298700483|gb|ADI91048.1| putative deaminase [Acinetobacter sp. DR1]
          Length = 158

 Score =  187 bits (475), Expect = 7e-46,   Method: Composition-based stats.
 Identities = 56/139 (40%), Positives = 76/139 (54%), Gaps = 1/139 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  A E+A+ AA + EIPVGA+ V  N++I    N    L D TAHAEI AIR  C  L+
Sbjct: 1   MQLAYEQAELAAQQGEIPVGAIVVSQNRVIGSGYNAPISLLDPTAHAEIQAIRAACLSLN 60

Query: 68  QEILP-EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
              LP +  LYVTLEPCTMC  A+  ARI+ + +G + PK G + +  Q       +H  
Sbjct: 61  NYRLPDDATLYVTLEPCTMCVGALVHARIKHVVFGTTEPKAGSLVSARQLLQDGYYNHRF 120

Query: 127 EIYPGISEQRSRQIIQDFF 145
               G  +++  Q +  FF
Sbjct: 121 TFQQGCLQEKCAQQLSHFF 139


>gi|81300665|ref|YP_400873.1| tRNA-adenosine deaminase [Synechococcus elongatus PCC 7942]
 gi|81169546|gb|ABB57886.1| tRNA-adenosine deaminase [Synechococcus elongatus PCC 7942]
          Length = 168

 Score =  187 bits (475), Expect = 7e-46,   Method: Composition-based stats.
 Identities = 54/148 (36%), Positives = 79/148 (53%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           +  + +M+ A E+A  A    EIP+GAV V    +++   NR    +D   HAEI+AIR 
Sbjct: 15  ETHHRWMTIAYEQAVIAGTAGEIPIGAVIVHQGHLLATGQNRRERDRDPCGHAEIIAIRA 74

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
               +    L +  LYVTLEPC MCA AI  AR+ +L Y A +PK G I +         
Sbjct: 75  AAARIGDWRLSDCQLYVTLEPCPMCAGAIIQARLGQLIYAADDPKAGAIRSLLNLPDSPV 134

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            HH   +  GI  +   Q+++D+F++RR
Sbjct: 135 SHHHLSVLAGILAEPCGQLLRDWFQQRR 162


>gi|68172021|ref|ZP_00545314.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [Ehrlichia
           chaffeensis str. Sapulpa]
 gi|88658306|ref|YP_507267.1| cytidine and deoxycytidylate deaminase family protein [Ehrlichia
           chaffeensis str. Arkansas]
 gi|67998558|gb|EAM85318.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [Ehrlichia
           chaffeensis str. Sapulpa]
 gi|88599763|gb|ABD45232.1| cytidine and deoxycytidylate deaminase family protein [Ehrlichia
           chaffeensis str. Arkansas]
          Length = 140

 Score =  186 bits (474), Expect = 7e-46,   Method: Composition-based stats.
 Identities = 78/142 (54%), Positives = 96/142 (67%), Gaps = 4/142 (2%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  A+ +AQ      E+PVGAV V NN++IS A N N    D TAHAEILAIR  C+ILS
Sbjct: 1   MKLAISKAQE--DLLEVPVGAVIVHNNEVISSANNSNIHDIDPTAHAEILAIRNACKILS 58

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
             IL + D+YVTLEPC MCA AIS ++IRRLY+GA N K G IENG + +    CHH PE
Sbjct: 59  THILNQCDIYVTLEPCAMCAQAISFSKIRRLYFGAYNKKYGAIENGARIFQF--CHHVPE 116

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
           +Y GI E  + ++I DFFK+ R
Sbjct: 117 VYGGILEAENTKLITDFFKKLR 138


>gi|197294746|ref|YP_001799287.1| Cytidine/deoxycytidylate deaminase family protein [Candidatus
           Phytoplasma australiense]
 gi|171854073|emb|CAM12046.1| Cytidine/deoxycytidylate deaminase family protein [Candidatus
           Phytoplasma australiense]
          Length = 166

 Score =  186 bits (474), Expect = 7e-46,   Method: Composition-based stats.
 Identities = 57/148 (38%), Positives = 82/148 (55%), Gaps = 1/148 (0%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
            K   FM  A +EA  A L+ E+PVGAV VLNN+II+RA N  ++      HAE LA+  
Sbjct: 5   DKNLFFMKAAFQEAYKAYLKKEVPVGAVVVLNNQIIARAHNNRKQKNLFFGHAEFLALIK 64

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
             + L    L    +YVTLEPC MCA A+  A ++ +YYGA++ K G I++    + L  
Sbjct: 65  ANKKLKNRRLTNSSVYVTLEPCLMCAGALIQAGVKHVYYGAADSKTGCIKSLLTSFELP- 123

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
             H    + G   Q S  +++ FF++ R
Sbjct: 124 LPHKVIAHSGFLAQESSDLLKTFFQQLR 151


>gi|154251101|ref|YP_001411925.1| zinc-binding CMP/dCMP deaminase [Parvibaculum lavamentivorans DS-1]
 gi|154155051|gb|ABS62268.1| CMP/dCMP deaminase zinc-binding [Parvibaculum lavamentivorans DS-1]
          Length = 164

 Score =  186 bits (474), Expect = 7e-46,   Method: Composition-based stats.
 Identities = 75/130 (57%), Positives = 96/130 (73%), Gaps = 1/130 (0%)

Query: 21  RNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVT 79
           R E+PVGAV V    ++++RAGNR  ELKD TAHAE+LAIR  C  +  E L   DLYVT
Sbjct: 34  RGEVPVGAVVVDGEGRVLARAGNRTLELKDPTAHAELLAIRAACAEIGSERLIGCDLYVT 93

Query: 80  LEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139
           LEPC MCA AIS ARIRRLYYGA++ KGGG+++G + +T  TCHH P++Y GI E+RS +
Sbjct: 94  LEPCAMCATAISFARIRRLYYGAADEKGGGVDHGPRIFTQPTCHHRPDVYGGIGERRSAE 153

Query: 140 IIQDFFKERR 149
           +++ FF  RR
Sbjct: 154 LLRSFFALRR 163


>gi|78066752|ref|YP_369521.1| tRNA-adenosine deaminase [Burkholderia sp. 383]
 gi|107028852|ref|YP_625947.1| CMP/dCMP deaminase, zinc-binding [Burkholderia cenocepacia AU 1054]
 gi|116689989|ref|YP_835612.1| CMP/dCMP deaminase, zinc-binding [Burkholderia cenocepacia HI2424]
 gi|170733328|ref|YP_001765275.1| CMP/dCMP deaminase zinc-binding [Burkholderia cenocepacia MC0-3]
 gi|77967497|gb|ABB08877.1| tRNA-adenosine deaminase [Burkholderia sp. 383]
 gi|105898016|gb|ABF80974.1| tRNA-adenosine deaminase [Burkholderia cenocepacia AU 1054]
 gi|116648078|gb|ABK08719.1| tRNA-adenosine deaminase [Burkholderia cenocepacia HI2424]
 gi|169816570|gb|ACA91153.1| CMP/dCMP deaminase zinc-binding [Burkholderia cenocepacia MC0-3]
          Length = 159

 Score =  186 bits (474), Expect = 8e-46,   Method: Composition-based stats.
 Identities = 47/122 (38%), Positives = 68/122 (55%)

Query: 24  IPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83
           +PVGAV V  +++I+R  N      D +AHAE+ A+RM  + L    +P  +LYVTLEPC
Sbjct: 17  VPVGAVLVRGDEVIARGFNHPIGGHDPSAHAEMAALRMAAQHLQNYRMPGCELYVTLEPC 76

Query: 84  TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQD 143
            MCA AI  ARI R+ YGA++PK G   +    +     +H  E+  G+        ++ 
Sbjct: 77  LMCAGAIMHARIARVVYGAADPKTGACGSVIDAFANPQLNHHTEVTGGVLADECGAALKS 136

Query: 144 FF 145
           FF
Sbjct: 137 FF 138


>gi|290978118|ref|XP_002671783.1| predicted protein [Naegleria gruberi]
 gi|284085355|gb|EFC39039.1| predicted protein [Naegleria gruberi]
          Length = 214

 Score =  186 bits (474), Expect = 8e-46,   Method: Composition-based stats.
 Identities = 50/169 (29%), Positives = 78/169 (46%), Gaps = 23/169 (13%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           ++  ++M  AL  AQ A    E+PVG V V +NKI+ R  N+  + K+ T HAE+ A   
Sbjct: 16  EQDEIYMREALNMAQKALEELEVPVGCVIVHDNKIVGRGYNKTNQKKNATRHAELEAFDE 75

Query: 62  GCRILSQE------ILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
                S+E         E  LYVT+EPC MCA+A+ L +I R+  G  N + GG  +   
Sbjct: 76  ITENYSEELNNNVNFFKECTLYVTVEPCVMCASALILLKIGRVVCGCMNERFGGCGSVLN 135

Query: 116 FY-----------------TLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
            +                      +   E   G+ E+   +I+Q F+++
Sbjct: 136 IHQSCYNSLNHNHHHDQHGNNNQLNWKYECVHGLFEKECIEILQRFYEQ 184


>gi|182418731|ref|ZP_02950004.1| tRNA-specific adenosine deaminase [Clostridium butyricum 5521]
 gi|237669698|ref|ZP_04529675.1| tRNA-specific adenosine deaminase [Clostridium butyricum E4 str.
           BoNT E BL5262]
 gi|182377425|gb|EDT74981.1| tRNA-specific adenosine deaminase [Clostridium butyricum 5521]
 gi|237654772|gb|EEP52335.1| tRNA-specific adenosine deaminase [Clostridium butyricum E4 str.
           BoNT E BL5262]
          Length = 149

 Score =  186 bits (474), Expect = 8e-46,   Method: Composition-based stats.
 Identities = 53/143 (37%), Positives = 73/143 (51%), Gaps = 1/143 (0%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           F+  A  EA  A  + EIPVGAV V +  II R  N    L DVTAHAEILAI+     L
Sbjct: 3   FIDEAKAEAIKAYDKGEIPVGAVIVKDGVIIGRGHNLKETLNDVTAHAEILAIKEASNNL 62

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L   ++YVTLEPC MCA+AI  +RI ++Y G  N   G   +          +   
Sbjct: 63  GDWRLDGAEMYVTLEPCPMCASAIVQSRISKVYIGTFNKDMGACGSVISLLDSRRLNSFV 122

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           ++   + ++   + +  FF+E R
Sbjct: 123 DVKW-LYDKECSEFLVKFFEENR 144


>gi|302544137|ref|ZP_07296479.1| cytidine and deoxycytidylate deaminase [Streptomyces hygroscopicus
           ATCC 53653]
 gi|302461755|gb|EFL24848.1| cytidine and deoxycytidylate deaminase [Streptomyces himastatinicus
           ATCC 53653]
          Length = 166

 Score =  186 bits (474), Expect = 8e-46,   Method: Composition-based stats.
 Identities = 51/140 (36%), Positives = 70/140 (50%), Gaps = 1/140 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  ALEEA  A    ++PVGAV +  +  ++ R  N      D TAHAE+LA+R   R L
Sbjct: 25  MRLALEEAVRAPETGDVPVGAVVLGPDGTVLGRGRNEREAHGDPTAHAEVLALRAAARRL 84

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L    L VTLEPC MCA AI L+R+ R+ YGA + K G + +          +H P
Sbjct: 85  GGWRLTGCTLVVTLEPCAMCAGAIVLSRLDRVVYGAIDEKAGAVGSLWDIVRDRRLNHRP 144

Query: 127 EIYPGISEQRSRQIIQDFFK 146
           E+   +        +  FF+
Sbjct: 145 EVIHDVLPDECAAPLTAFFR 164


>gi|260432946|ref|ZP_05786917.1| tRNA-specific adenosine deaminase [Silicibacter lacuscaerulensis
           ITI-1157]
 gi|260416774|gb|EEX10033.1| tRNA-specific adenosine deaminase [Silicibacter lacuscaerulensis
           ITI-1157]
          Length = 156

 Score =  186 bits (474), Expect = 8e-46,   Method: Composition-based stats.
 Identities = 75/143 (52%), Positives = 100/143 (69%), Gaps = 1/143 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  ALE+A+ A  R E+PVGAV V  + +II+  GNR REL D TAHAEILA+R  CR +
Sbjct: 7   MDKALEQARAAGDRGEVPVGAVIVSPDGRIIAADGNRTRELHDPTAHAEILALRAACRAV 66

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
             E L   DLYVTLEPC MCAAA++ ARIRR+YYGA++PK GG+ +G + ++    HH P
Sbjct: 67  GSERLTGHDLYVTLEPCAMCAAALAAARIRRIYYGAADPKSGGVAHGARVFSHPQAHHRP 126

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+Y GI+ +    +++DFF  +R
Sbjct: 127 EVYDGIAAEDCAWLLRDFFAAQR 149


>gi|289547972|ref|YP_003472960.1| CMP/dCMP deaminase zinc-binding protein [Thermocrinis albus DSM
           14484]
 gi|289181589|gb|ADC88833.1| CMP/dCMP deaminase zinc-binding protein [Thermocrinis albus DSM
           14484]
          Length = 156

 Score =  186 bits (474), Expect = 9e-46,   Method: Composition-based stats.
 Identities = 59/150 (39%), Positives = 81/150 (54%), Gaps = 2/150 (1%)

Query: 1   MKK-GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
           MK     F+   L EA  A  + EIPVG V V   +II+RA NR   LKD TAHAEILAI
Sbjct: 1   MKDSHEPFVKACLLEAHRAFRKGEIPVGCVVVKEGRIIARAHNRTIALKDPTAHAEILAI 60

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
           R   + L +  L    LYVTLEPC MCA A+ LAR+ ++ + A + K G + +       
Sbjct: 61  RKALKKLGESFLYGCTLYVTLEPCAMCAYALVLARVDKVIFLAQDEKLGAVMSLYNLLDE 120

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
              +H       +  + + ++++DFFK  R
Sbjct: 121 TAFNHRVRWEF-LPVEEAGRLLRDFFKNLR 149


>gi|298530999|ref|ZP_07018400.1| CMP/dCMP deaminase zinc-binding [Desulfonatronospira thiodismutans
           ASO3-1]
 gi|298509022|gb|EFI32927.1| CMP/dCMP deaminase zinc-binding [Desulfonatronospira thiodismutans
           ASO3-1]
          Length = 171

 Score =  186 bits (474), Expect = 9e-46,   Method: Composition-based stats.
 Identities = 56/150 (37%), Positives = 78/150 (52%), Gaps = 2/150 (1%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVL--NNKIISRAGNRNRELKDVTAHAEILAI 59
           ++  V M  AL+EA  A  R E+PVGAV       +I++   NR  EL D TAHAEI+A+
Sbjct: 20  EQWRVLMQEALKEAGKARSRGEVPVGAVLADAGTGEILAGGSNRCIELNDPTAHAEIIAL 79

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
           R   +      LP   L VTLEPC MC  AI+ ARI  L YG  +P  G + +       
Sbjct: 80  RRAGQARGNYRLPGTVLAVTLEPCLMCLGAIAQARIDGLVYGPRDPGAGALFSRPDILDF 139

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
               H   I   I +    +++Q+FF+++R
Sbjct: 140 VWLSHKFWIVENILKDECLELLQNFFRDKR 169


>gi|299138415|ref|ZP_07031594.1| CMP/dCMP deaminase zinc-binding [Acidobacterium sp. MP5ACTX8]
 gi|298599661|gb|EFI55820.1| CMP/dCMP deaminase zinc-binding [Acidobacterium sp. MP5ACTX8]
          Length = 182

 Score =  186 bits (474), Expect = 9e-46,   Method: Composition-based stats.
 Identities = 55/152 (36%), Positives = 74/152 (48%), Gaps = 5/152 (3%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRM 61
               FM  A+ EA+ A    E+PVGA+ V    +I+SR  N+     D TAHAEI+A+R 
Sbjct: 8   DDEAFMRLAIAEARAAEAAGEVPVGAIIVSPTGEIVSRGNNQVLRTNDPTAHAEIVALRA 67

Query: 62  GCRILSQEIL----PEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFY 117
               L    L        LY TLEPC MCA AI  ARI RL + A +PK G   +     
Sbjct: 68  AGLALDNYRLLTPEGGCTLYCTLEPCAMCAGAILHARIARLVFAARDPKAGACGSVLSVM 127

Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
                +H  E+   I  +    ++ +FF+ RR
Sbjct: 128 NHPALNHRVEVVESILTEECSAMLTNFFRARR 159


>gi|302535698|ref|ZP_07288040.1| cytidine/deoxycytidine deaminase [Streptomyces sp. C]
 gi|302444593|gb|EFL16409.1| cytidine/deoxycytidine deaminase [Streptomyces sp. C]
          Length = 163

 Score =  186 bits (474), Expect = 9e-46,   Method: Composition-based stats.
 Identities = 52/142 (36%), Positives = 73/142 (51%), Gaps = 1/142 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  ALEEA  A    ++PVGAV +    +++S   N      D TAHAE+LA+R     L
Sbjct: 22  MRLALEEAALAVPAGDVPVGAVVLGPGGELLSTGHNEREAAGDPTAHAELLALRRAAARL 81

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
            +  L    L VTLEPC MCA A+  +R+ R+ YGA + K G   +          +H P
Sbjct: 82  GEWRLTGCTLVVTLEPCVMCAGALVQSRVARVVYGAGDEKAGAAGSLWDLVRDRRLNHRP 141

Query: 127 EIYPGISEQRSRQIIQDFFKER 148
           E+  G+ EQ   + + DFF+  
Sbjct: 142 EVIRGVLEQECARQLTDFFRAL 163


>gi|284040230|ref|YP_003390160.1| CMP/dCMP deaminase zinc-binding protein [Spirosoma linguale DSM 74]
 gi|283819523|gb|ADB41361.1| CMP/dCMP deaminase zinc-binding protein [Spirosoma linguale DSM 74]
          Length = 144

 Score =  186 bits (474), Expect = 9e-46,   Method: Composition-based stats.
 Identities = 57/146 (39%), Positives = 82/146 (56%), Gaps = 5/146 (3%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
            + FM  AL  A+ AA   EIPVGA+ V  N+II++A N+  +LKDVTAHAEI+AI    
Sbjct: 3   DDYFMEIALTLAEEAADNGEIPVGAIVVCRNRIIAKARNQTEQLKDVTAHAEIMAITSAT 62

Query: 64  RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123
           + L  + LP+  +YVTLEPC MCA A+  A++ RL  GA++ + G              H
Sbjct: 63  QYLGSKYLPDCTMYVTLEPCVMCAGALFWAQLGRLVIGAADARRG-----YSRVETNLLH 117

Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149
               +  G+  + S+ ++  FF   R
Sbjct: 118 PKTRVETGVLAEESQALLAKFFTRLR 143


>gi|114569170|ref|YP_755850.1| tRNA-adenosine deaminase [Maricaulis maris MCS10]
 gi|114339632|gb|ABI64912.1| tRNA-adenosine deaminase [Maricaulis maris MCS10]
          Length = 174

 Score =  186 bits (473), Expect = 9e-46,   Method: Composition-based stats.
 Identities = 62/127 (48%), Positives = 81/127 (63%), Gaps = 2/127 (1%)

Query: 25  PVGAVAVLN--NKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEP 82
           P+GA+ V    + I+++A NR     D TAHAEILA+R     L    L  ++LYVTLEP
Sbjct: 35  PIGAIIVDPATDSIVAQAHNRPIADHDPTAHAEILALREAAAKLGNYRLTGLELYVTLEP 94

Query: 83  CTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQ 142
           C MCA AIS ARI RL +GAS+ KGG + +GT+F+   TCH  PEI PGI       +++
Sbjct: 95  CAMCAGAISHARIGRLVFGASDEKGGAVVSGTRFFEQPTCHWRPEIVPGILADEGAAMLK 154

Query: 143 DFFKERR 149
           DFF+ RR
Sbjct: 155 DFFRARR 161


>gi|241760863|ref|ZP_04758952.1| CMP/dCMP deaminase zinc-binding [Zymomonas mobilis subsp. mobilis
           ATCC 10988]
 gi|241374482|gb|EER63943.1| CMP/dCMP deaminase zinc-binding [Zymomonas mobilis subsp. mobilis
           ATCC 10988]
          Length = 160

 Score =  186 bits (473), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 66/143 (46%), Positives = 95/143 (66%), Gaps = 1/143 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNREL-KDVTAHAEILAIRMGCRIL 66
           M  AL +A++AA + E+PVGAV     KII+ AGN  +    D T HAE+ A+R    +L
Sbjct: 17  MRHALLQAESAAHQGEVPVGAVVTFKGKIIAVAGNAMQPPFIDPTGHAEVRALRQAASVL 76

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L + DL+VTLEPC MCA AI+ ARIRRLYYGA +PKGG + +G + +   +CHH P
Sbjct: 77  GSSRLDQCDLWVTLEPCAMCAGAIATARIRRLYYGADDPKGGAVLSGVRLFFQPSCHHQP 136

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           EIY  +  +++ ++++ FFK++R
Sbjct: 137 EIYNDLGSRKASELLRQFFKQKR 159


>gi|225873364|ref|YP_002754823.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Acidobacterium capsulatum ATCC 51196]
 gi|225793789|gb|ACO33879.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Acidobacterium capsulatum ATCC 51196]
          Length = 164

 Score =  186 bits (473), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 57/147 (38%), Positives = 82/147 (55%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
           +  ++M  AL EA+ A    E+PVGAVAV+   I++R  NR     D TAHAE++ +R  
Sbjct: 18  QTELWMQAALAEARAAEAAGEVPVGAVAVVEGSILARGQNRVLRDVDPTAHAEMVVLRAA 77

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
              +    L   +LYVTLEPC MCA A+  AR+ RL YGAS+PK G   +          
Sbjct: 78  AEAIGNYRLTGCELYVTLEPCAMCAGAMVHARLARLVYGASDPKAGAAGSVLAVVNHPQL 137

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H  EI  G+  +    ++++FF+ RR
Sbjct: 138 NHQMEITGGVLAEECGTLLREFFRARR 164


>gi|256420111|ref|YP_003120764.1| CMP/dCMP deaminase zinc-binding [Chitinophaga pinensis DSM 2588]
 gi|256035019|gb|ACU58563.1| CMP/dCMP deaminase zinc-binding [Chitinophaga pinensis DSM 2588]
          Length = 146

 Score =  186 bits (473), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 56/153 (36%), Positives = 81/153 (52%), Gaps = 15/153 (9%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
               +M  AL EA+ A    E+PVGA+ VL++KII +  N+   L D TAHAE+LA+   
Sbjct: 2   DDKYYMQQALREARKAFDAGEVPVGAIVVLSDKIIGKGSNQVEMLNDCTAHAEMLALTAA 61

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPK------GGGIENGTQF 116
              L  + L E  LYVTLEPC MCA A+  ++I R+ Y A + K       G        
Sbjct: 62  FNYLGSKYLMEATLYVTLEPCLMCAGALYWSKIGRIVYAAKDEKNSYRRVAGAT------ 115

Query: 117 YTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
              +  H   ++  G  E+ S Q+++ FF++RR
Sbjct: 116 ---SPFHPKTKVEQGPCEEESLQLVKTFFEQRR 145


>gi|254247929|ref|ZP_04941250.1| Cytidine/deoxycytidylate deaminase, zinc-binding region
           [Burkholderia cenocepacia PC184]
 gi|124872705|gb|EAY64421.1| Cytidine/deoxycytidylate deaminase, zinc-binding region
           [Burkholderia cenocepacia PC184]
          Length = 162

 Score =  186 bits (473), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 53/140 (37%), Positives = 75/140 (53%)

Query: 6   VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
            FM  A   A+ A    E+PVGAV V  +++I+R  N      D +AHAE+ A+RM  + 
Sbjct: 2   HFMRLAQAAAEEARAAGEVPVGAVLVRGDEVIARGFNHPIGGHDPSAHAEMAALRMAAQH 61

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           L    +P  +LYVTLEPC MCA AI  ARI R+ YGA++PK G   +    +     +H 
Sbjct: 62  LQNYRMPGCELYVTLEPCLMCAGAIMHARIARVVYGAADPKTGACGSVIDAFANPQLNHH 121

Query: 126 PEIYPGISEQRSRQIIQDFF 145
            E+  G+        ++ FF
Sbjct: 122 TEVTGGVLADECGAALKSFF 141


>gi|298293867|ref|YP_003695806.1| CMP/dCMP deaminase zinc-binding protein [Starkeya novella DSM 506]
 gi|296930378|gb|ADH91187.1| CMP/dCMP deaminase zinc-binding protein [Starkeya novella DSM 506]
          Length = 172

 Score =  186 bits (473), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 73/129 (56%), Positives = 94/129 (72%)

Query: 21  RNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80
           R E+PVGAV V     ++  GNR REL D TAHAE++ IR    +L  + L E DLYVTL
Sbjct: 39  RGEVPVGAVLVRGGTALAAEGNRMRELADPTAHAEMMVIRAAASVLGSDRLAECDLYVTL 98

Query: 81  EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140
           EPCTMCA AIS AR+RR+YYGA +PKGG +ENG +F++ ATCHH PE Y G+ E+ S ++
Sbjct: 99  EPCTMCAGAISFARLRRIYYGAPDPKGGAVENGVRFFSQATCHHRPEAYGGLGERESAEL 158

Query: 141 IQDFFKERR 149
           +++FF ERR
Sbjct: 159 LREFFAERR 167


>gi|302342017|ref|YP_003806546.1| CMP/dCMP deaminase zinc-binding protein [Desulfarculus baarsii DSM
           2075]
 gi|301638630|gb|ADK83952.1| CMP/dCMP deaminase zinc-binding protein [Desulfarculus baarsii DSM
           2075]
          Length = 171

 Score =  186 bits (473), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 48/129 (37%), Positives = 72/129 (55%), Gaps = 1/129 (0%)

Query: 22  NEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80
            E P+GAV V    ++++  GNR     D TAHAE+L +R     +    L    LYV+L
Sbjct: 31  GETPIGAVLVDAAGRVLAAHGNRAISHTDPTAHAEMLVLRQAAAAMGNYRLVGSTLYVSL 90

Query: 81  EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140
           EPC MCA AI  AR+RR+ YGA++PK G + +          +H P +  G+  + S  +
Sbjct: 91  EPCPMCAGAIVWARVRRVVYGAADPKAGALGSALDLSRQPGLNHRPIVEGGLLAEESAAL 150

Query: 141 IQDFFKERR 149
           +++FF+ RR
Sbjct: 151 LREFFQSRR 159


>gi|262200019|ref|YP_003271228.1| CMP/dCMP deaminase zinc-binding protein [Haliangium ochraceum DSM
           14365]
 gi|262083366|gb|ACY19335.1| CMP/dCMP deaminase zinc-binding protein [Haliangium ochraceum DSM
           14365]
          Length = 147

 Score =  186 bits (473), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 52/131 (39%), Positives = 73/131 (55%), Gaps = 1/131 (0%)

Query: 19  ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYV 78
               ++PVGAV V + +II+R  NR +  KD TAHAE+ A+R   R L    +    LYV
Sbjct: 12  GDAGDVPVGAVIVCDGEIIARGRNRRQLDKDPTAHAEVEALRSASRSLGNWRVEG-TLYV 70

Query: 79  TLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSR 138
           T EPC MCA A+  AR++RL YG  NPK G +    +  + A  +H  E+  G+S Q   
Sbjct: 71  TQEPCPMCAGALVNARVQRLVYGCPNPKAGSVHTLYRLVSDARLNHRIEVRGGVSAQACT 130

Query: 139 QIIQDFFKERR 149
            +++ FF   R
Sbjct: 131 GLLKSFFAALR 141


>gi|313677068|ref|YP_004055064.1| cmp/dcmp deaminase zinc-binding protein [Marivirga tractuosa DSM
           4126]
 gi|312943766|gb|ADR22956.1| CMP/dCMP deaminase zinc-binding protein [Marivirga tractuosa DSM
           4126]
          Length = 152

 Score =  186 bits (473), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 55/148 (37%), Positives = 79/148 (53%), Gaps = 5/148 (3%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
                FM  AL +A+ A    EIPVGAV V   KII++A N+   L DVTAHAE+LAI  
Sbjct: 6   NSDEHFMREALRQAEIAYEEGEIPVGAVVVCQKKIIAKAYNQTERLNDVTAHAEMLAITS 65

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
               L  + L +  LYV+LEPC MCA A++ ++I  + Y  ++ K G  +          
Sbjct: 66  AANHLGGKYLTDCTLYVSLEPCGMCAGALNWSQISEIVYALADEKRGFTK-----INPNM 120

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            H   ++  G+    S+++I DFF + R
Sbjct: 121 IHPKTKVKSGLMAAESKKLIDDFFAKMR 148


>gi|58581831|ref|YP_200847.1| hypothetical protein XOO2208 [Xanthomonas oryzae pv. oryzae
           KACC10331]
 gi|84623733|ref|YP_451105.1| hypothetical protein XOO_2076 [Xanthomonas oryzae pv. oryzae MAFF
           311018]
 gi|188576614|ref|YP_001913543.1| tRNA-specific adenosine deaminase [Xanthomonas oryzae pv. oryzae
           PXO99A]
 gi|58426425|gb|AAW75462.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae
           KACC10331]
 gi|84367673|dbj|BAE68831.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae MAFF
           311018]
 gi|188521066|gb|ACD59011.1| tRNA-specific adenosine deaminase [Xanthomonas oryzae pv. oryzae
           PXO99A]
          Length = 170

 Score =  186 bits (473), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 51/148 (34%), Positives = 74/148 (50%), Gaps = 2/148 (1%)

Query: 4   GNVFMSCALEEAQNA-ALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRM 61
              +M  AL  A+ A    +EIPVGA+ V     ++    N N    D +AHAEI+A+R 
Sbjct: 16  DVHWMQHALHLAECAERDHDEIPVGALIVGAEGNVLGEGWNFNIASHDPSAHAEIVAMRD 75

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
             R LS   L    LYVTLEPC MCA A+  ARI R+ + AS+PK G   +         
Sbjct: 76  AGRRLSNHRLIGCTLYVTLEPCAMCAMAMIHARIARVVFAASDPKTGACGSVFDLLADPR 135

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H   +  G+    +   + ++F+ +R
Sbjct: 136 HNHRVRVCGGVLAAEASLRLTNYFRAKR 163


>gi|259508111|ref|ZP_05751011.1| tRNA-specific adenosine deaminase [Corynebacterium efficiens
           YS-314]
 gi|259164334|gb|EEW48888.1| tRNA-specific adenosine deaminase [Corynebacterium efficiens
           YS-314]
          Length = 159

 Score =  186 bits (473), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 52/149 (34%), Positives = 78/149 (52%), Gaps = 3/149 (2%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRM 61
           +    M  ALE A+      ++PVGAV    + +I++ A NR    +D TAHAEI+A+R 
Sbjct: 12  QDERRMRHALEIARQ-TPPGDVPVGAVIYAPDGQILATATNRRETDRDPTAHAEIIALRC 70

Query: 62  GCRILSQ-EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
             R  +    L +  L VTLEPC+MCA A+  AR+ RL +GA  P+ G   +        
Sbjct: 71  AARRFTDGWRLTDCTLVVTLEPCSMCAGALVGARVGRLVFGAFEPRTGACGSVFDVVRDP 130

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
              H  E+  G+ E+   +++ DFF  +R
Sbjct: 131 AVLHRAEVTGGVLEEDCAKLMTDFFSGQR 159


>gi|260773318|ref|ZP_05882234.1| tRNA-specific adenosine-34 deaminase [Vibrio metschnikovii CIP
           69.14]
 gi|260612457|gb|EEX37660.1| tRNA-specific adenosine-34 deaminase [Vibrio metschnikovii CIP
           69.14]
          Length = 165

 Score =  186 bits (473), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 49/126 (38%), Positives = 69/126 (54%)

Query: 24  IPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83
           +PVGAV V + ++I+   NR+    D TAHAEI  +R   + L    L +  LYVTLEPC
Sbjct: 17  VPVGAVLVKDGQVIAEGWNRSIGGHDATAHAEIQVLRQAGQALQNYRLLDTTLYVTLEPC 76

Query: 84  TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQD 143
            MCA A+  +R+ R+ YGA + K G        +     +H   I  G+ E++ R  +Q 
Sbjct: 77  PMCAGALLHSRVARIVYGAPDLKAGAAGTVLNLFASQAAYHYAVIEKGLLEEQCRTQLQA 136

Query: 144 FFKERR 149
           FFK RR
Sbjct: 137 FFKRRR 142


>gi|126727514|ref|ZP_01743348.1| cytidine and deoxycytidylate deaminase family protein
           [Rhodobacterales bacterium HTCC2150]
 gi|126703294|gb|EBA02393.1| cytidine and deoxycytidylate deaminase family protein
           [Rhodobacterales bacterium HTCC2150]
          Length = 143

 Score =  185 bits (472), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 74/143 (51%), Positives = 96/143 (67%), Gaps = 1/143 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  AL+EA+ A  R E+PVGAV +  + ++I++AGN  R   D  AHAEILAIR  C  L
Sbjct: 1   MDIALDEARAAGQRGEVPVGAVILSRDGQVIAQAGNETRAQNDPIAHAEILAIRAACSAL 60

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
            +E L   DLYVTLEPC MCAAAI+ ARI R+YYGAS+PK GG+  G + +  A  HH P
Sbjct: 61  GRERLQGFDLYVTLEPCAMCAAAIAAARIGRVYYGASDPKSGGVAQGARVFDHAQSHHKP 120

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+Y GIS +    +++DFF  +R
Sbjct: 121 EVYDGISAKECENLLKDFFAAKR 143


>gi|56752247|ref|YP_172948.1| putative cytidine and deoxycytidylate deaminase [Synechococcus
           elongatus PCC 6301]
 gi|56687206|dbj|BAD80428.1| putative cytidine and deoxycytidylate deaminase [Synechococcus
           elongatus PCC 6301]
          Length = 168

 Score =  185 bits (472), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 54/148 (36%), Positives = 79/148 (53%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           +  + +M+ A E+A  A    EIP+GAV V    +++   NR    +D   HAEI+AIR 
Sbjct: 15  ETHHRWMTIAYEQAVIAGTAGEIPIGAVIVHQGHLLATGQNRRERDRDPCGHAEIIAIRA 74

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
               +    L +  LYVTLEPC MCA AI  AR+ +L Y A +PK G I +         
Sbjct: 75  AAARIGDWRLSDCHLYVTLEPCPMCAGAIIQARLGQLIYAADDPKAGAIRSLLNLPDSPV 134

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            HH   +  GI  +   Q+++D+F++RR
Sbjct: 135 SHHHLSVLAGILAEPCGQLLRDWFQQRR 162


>gi|254430861|ref|ZP_05044564.1| tRNA-specific adenosine deaminase [Cyanobium sp. PCC 7001]
 gi|197625314|gb|EDY37873.1| tRNA-specific adenosine deaminase [Cyanobium sp. PCC 7001]
          Length = 206

 Score =  185 bits (472), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 48/144 (33%), Positives = 75/144 (52%), Gaps = 1/144 (0%)

Query: 7   FMSCALEEAQNAALRNEIPVGA-VAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           +M   L  AQ      EIPV A V   + + I    NR    +D   HAE++A+R   ++
Sbjct: 53  WMERLLRCAQRVGEDGEIPVAAAVLDQHGRCIGWGCNRRERQQDPLGHAELVALRQASQL 112

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           L    L    L VTLEPC MCA A+  ARI  L YGA +PK G + +        + HH 
Sbjct: 113 LGDWRLNSCTLLVTLEPCPMCAGALVQARIGTLVYGAPDPKRGAVGSCLDLVRHPSAHHH 172

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
             +  G++ +++ ++++ +F++RR
Sbjct: 173 MRVVGGLAGEQAGELLKAWFRQRR 196


>gi|319763286|ref|YP_004127223.1| cmp/dcmp deaminase zinc-binding protein [Alicycliphilus
           denitrificans BC]
 gi|317117847|gb|ADV00336.1| CMP/dCMP deaminase zinc-binding protein [Alicycliphilus
           denitrificans BC]
          Length = 358

 Score =  185 bits (472), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 50/144 (34%), Positives = 72/144 (50%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           +    +M  AL +A+ A    E+PVGAV V   ++I+   N      D TAHAEI A+R 
Sbjct: 5   EDDATWMREALAQARAALQDGEVPVGAVLVRGGEVIATGRNAPIAGHDPTAHAEIAALRA 64

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
               L    L    LYVTLEPC MCA A+  AR+ R+ YGA++PK G   +    +    
Sbjct: 65  AAARLGNYRLDGCTLYVTLEPCAMCAGAMLHARLPRVVYGAADPKTGAAGSVVDLFAEPR 124

Query: 122 CHHSPEIYPGISEQRSRQIIQDFF 145
            +H   +  G+  +    ++  FF
Sbjct: 125 LNHQTRVAGGVLAEECGALLSGFF 148


>gi|25026753|ref|NP_736807.1| hypothetical protein CE0197 [Corynebacterium efficiens YS-314]
 gi|23492032|dbj|BAC17007.1| conserved hypothetical protein [Corynebacterium efficiens YS-314]
          Length = 160

 Score =  185 bits (472), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 52/149 (34%), Positives = 78/149 (52%), Gaps = 3/149 (2%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRM 61
           +    M  ALE A+      ++PVGAV    + +I++ A NR    +D TAHAEI+A+R 
Sbjct: 13  QDERRMRHALEIARQ-TPPGDVPVGAVIYAPDGQILATATNRRETDRDPTAHAEIIALRC 71

Query: 62  GCRILSQ-EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
             R  +    L +  L VTLEPC+MCA A+  AR+ RL +GA  P+ G   +        
Sbjct: 72  AARRFTDGWRLTDCTLVVTLEPCSMCAGALVGARVGRLVFGAFEPRTGACGSVFDVVRDP 131

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
              H  E+  G+ E+   +++ DFF  +R
Sbjct: 132 AVLHRAEVTGGVLEEDCAKLMTDFFSGQR 160


>gi|152112359|sp|Q4UJW9|Y1319_RICFE RecName: Full=Uncharacterized deaminase RF_1319
          Length = 144

 Score =  185 bits (472), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 65/144 (45%), Positives = 95/144 (65%), Gaps = 2/144 (1%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVL--NNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M  AL++A  A  +NE+PVGAV V   N KII  + N   E  +   HAEI+AI   C +
Sbjct: 1   MEQALKQAGIAFDKNEVPVGAVIVDRLNQKIIVSSHNNTEEKNNALYHAEIIAINEACNL 60

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           +S + L + D+YVTLEPC MCAAAI+ +R++RL+YGAS+ K G +E+  +++  + C + 
Sbjct: 61  ISSKNLNDYDIYVTLEPCAMCAAAIAHSRLKRLFYGASDSKHGAVESNLRYFNSSVCFYR 120

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
           PEIY GI  + SR ++++FFK  R
Sbjct: 121 PEIYSGILAEDSRLLMKEFFKRIR 144


>gi|330825481|ref|YP_004388784.1| CMP/dCMP deaminase zinc-binding protein [Alicycliphilus
           denitrificans K601]
 gi|329310853|gb|AEB85268.1| CMP/dCMP deaminase zinc-binding protein [Alicycliphilus
           denitrificans K601]
          Length = 358

 Score =  185 bits (472), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 50/144 (34%), Positives = 72/144 (50%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           +    +M  AL +A+ A    E+PVGAV V   ++I+   N      D TAHAEI A+R 
Sbjct: 5   EDDATWMRAALAQARAALQDGEVPVGAVLVRGGEVIATGRNAPIAGHDPTAHAEIAALRA 64

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
               L    L    LYVTLEPC MCA A+  AR+ R+ YGA++PK G   +    +    
Sbjct: 65  AAARLGNYRLDGCTLYVTLEPCAMCAGAMLHARLPRVVYGAADPKTGAAGSVVDLFAEPR 124

Query: 122 CHHSPEIYPGISEQRSRQIIQDFF 145
            +H   +  G+  +    ++  FF
Sbjct: 125 LNHQTRVAGGVLAEECGALLSGFF 148


>gi|329570031|gb|EGG51786.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Enterococcus faecalis TX1467]
          Length = 144

 Score =  185 bits (472), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 50/127 (39%), Positives = 71/127 (55%)

Query: 23  EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEP 82
           E+P+GAV V   +II R  N     ++ TAHAE+ AI+  CR +    L E  L+VTLEP
Sbjct: 3   EVPIGAVIVRQGEIIGRGHNLREARQEATAHAEMYAIQEACRGIENWRLEETQLFVTLEP 62

Query: 83  CTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQ 142
           C MC+ A+ LARI  +YYGA++PK G              +H   +  G+ E+  R ++ 
Sbjct: 63  CPMCSGAMLLARIPEVYYGATDPKAGTAGTLMNLLEDERFNHVAYVEAGVLEEECRLLLV 122

Query: 143 DFFKERR 149
            FFK+ R
Sbjct: 123 QFFKKLR 129


>gi|227486589|ref|ZP_03916905.1| nucleoside deaminase [Anaerococcus lactolyticus ATCC 51172]
 gi|227235407|gb|EEI85422.1| nucleoside deaminase [Anaerococcus lactolyticus ATCC 51172]
          Length = 158

 Score =  185 bits (472), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 53/148 (35%), Positives = 78/148 (52%), Gaps = 1/148 (0%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           K    FM+ A+ EA+ A   +E+P+GAV V  ++I+ R  N   + K    HAEI A++ 
Sbjct: 7   KADKFFMTEAINEAKLAKSIDEVPIGAVVVCGDRIVGRGHNFTYKGKSALNHAEIYALKE 66

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
             + +    L E  +YVTLEPC MCA AI  +R++RL     +PK GG            
Sbjct: 67  AGKNIGDFRLEECTMYVTLEPCLMCAGAIMHSRVKRLVIACKDPKRGGFSTSFIDKDSPH 126

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +  PEI  G+ E+ S + +Q FF+  R
Sbjct: 127 LN-VPEISYGLMEEESLKELQSFFRALR 153


>gi|323525792|ref|YP_004227945.1| CMP/dCMP deaminase zinc-binding protein [Burkholderia sp. CCGE1001]
 gi|323382794|gb|ADX54885.1| CMP/dCMP deaminase zinc-binding protein protein [Burkholderia sp.
           CCGE1001]
          Length = 227

 Score =  185 bits (472), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 46/122 (37%), Positives = 69/122 (56%)

Query: 24  IPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83
           +PVGAV V  +++I++  N      D +AHAE++A+R   +I+    LP  +LYVTLEPC
Sbjct: 72  VPVGAVLVRGDEVIAKGFNHPIGAHDPSAHAEMIALRTAAQIVENYRLPGCELYVTLEPC 131

Query: 84  TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQD 143
            MCA AI  ARI R+ +GA +PK G   +    +     +H  E+  G+ E      ++ 
Sbjct: 132 LMCAGAIMHARIARVVFGARDPKTGACGSVVDAFANPQLNHHTEVVGGVLESECGAALKS 191

Query: 144 FF 145
           FF
Sbjct: 192 FF 193


>gi|325846128|ref|ZP_08169222.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Anaerococcus hydrogenalis ACS-025-V-Sch4]
 gi|325481721|gb|EGC84756.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Anaerococcus hydrogenalis ACS-025-V-Sch4]
          Length = 185

 Score =  185 bits (471), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 51/143 (35%), Positives = 76/143 (53%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
               +M  A+ EA+ A L  E+P+G V V N KII+R+ N   + K    HAEILAI   
Sbjct: 2   DDYFYMKEAINEAKLARLEEEVPIGCVIVKNGKIIARSHNYTYKGKSALKHAEILAIDKA 61

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
            + +    L +  +YVT+EPC+MCA AI  +RI RL    ++ K G   + T      + 
Sbjct: 62  SKYVGDFRLEDCTMYVTMEPCSMCAGAIINSRIDRLVIALADVKRGACGSNTNITGDRSQ 121

Query: 123 HHSPEIYPGISEQRSRQIIQDFF 145
            H  +   G+ + +S +I+Q FF
Sbjct: 122 LHFLDAEFGLMKDQSLEILQSFF 144


>gi|119714544|ref|YP_921509.1| tRNA-adenosine deaminase [Nocardioides sp. JS614]
 gi|119535205|gb|ABL79822.1| tRNA-adenosine deaminase [Nocardioides sp. JS614]
          Length = 143

 Score =  185 bits (471), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 50/143 (34%), Positives = 78/143 (54%), Gaps = 1/143 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  AL+EA+ A    ++P+GAV +  +   ++R  N      D T HAE++A+R   R  
Sbjct: 1   MRTALDEARAALASGDVPIGAVVLDPDGTPVARGRNVREADHDPTGHAEVVALRAAARAR 60

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
            +  L    L VTLEPCTMCA A  L+R+ R+ +GA +PK G + +          +H P
Sbjct: 61  GEWRLEGHTLVVTLEPCTMCAGAAVLSRVERIVFGAWDPKAGAVGSLWDVVRDRRLNHRP 120

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+  G+  + S  +++DFF  +R
Sbjct: 121 EVISGVLAEESAGLLEDFFLTQR 143


>gi|315924779|ref|ZP_07920996.1| tRNA-specific adenosine deaminase [Pseudoramibacter alactolyticus
           ATCC 23263]
 gi|315621678|gb|EFV01642.1| tRNA-specific adenosine deaminase [Pseudoramibacter alactolyticus
           ATCC 23263]
          Length = 164

 Score =  185 bits (471), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 52/142 (36%), Positives = 76/142 (53%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  AL+E + A    E PVGAV V   ++++   NR   L+D TAHAE+L IR   + L
Sbjct: 19  WMRLALDEGRQALAAGEFPVGAVVVCGGQVVAADHNRKETLQDPTAHAELLVIRAAAQRL 78

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
            +  L +  LYVT EPC MC  A+  AR+ +L YGA+  + G +E            ++ 
Sbjct: 79  GRWRLDDCTLYVTAEPCPMCMGAVIQARLAKLVYGAAEKRFGAVETTADLGRHPMLANAM 138

Query: 127 EIYPGISEQRSRQIIQDFFKER 148
           EIY GI E    ++++  F  R
Sbjct: 139 EIYAGICENDCIELMKQCFYNR 160


>gi|189350770|ref|YP_001946398.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia
           multivorans ATCC 17616]
 gi|189334792|dbj|BAG43862.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia
           multivorans ATCC 17616]
          Length = 159

 Score =  185 bits (471), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 47/126 (37%), Positives = 70/126 (55%)

Query: 22  NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81
            E+PVGAV V  +++++R  N      D +AHAE+ A+RM  + L    +P  +LYVTLE
Sbjct: 15  GEVPVGAVLVRGDEVLARGFNHPIGGHDPSAHAEMAALRMAAQHLQNYRMPGCELYVTLE 74

Query: 82  PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141
           PC MCA AI  ARI R+ +GA++PK G   +    +     +H  E+  G+        +
Sbjct: 75  PCLMCAGAIMHARIARVVFGAADPKTGVCGSVMDAFANPQLNHHTEVVGGVLAHECGAAL 134

Query: 142 QDFFKE 147
           + FF E
Sbjct: 135 KSFFAE 140


>gi|187776528|ref|ZP_02993001.1| hypothetical protein CLOSPO_00031 [Clostridium sporogenes ATCC
           15579]
 gi|187775187|gb|EDU38989.1| hypothetical protein CLOSPO_00031 [Clostridium sporogenes ATCC
           15579]
          Length = 148

 Score =  185 bits (471), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 58/145 (40%), Positives = 81/145 (55%), Gaps = 1/145 (0%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           N ++  A+ EA+ A    E+PVGAV V  NKII+++ N   ELKD TAHAE+LAI+  C+
Sbjct: 2   NSYIEYAIIEAKKALAIGEVPVGAVIVKENKIIAKSHNLKEELKDPTAHAEVLAIKKACK 61

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
           IL    L    +YVTLEPC MCA+AI  +RI  L+ G  +P GG   +       +    
Sbjct: 62  ILGNWRLKGCKMYVTLEPCAMCASAIIQSRISELHIGTFDPVGGACGSVVNITNNSYLKS 121

Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149
           +  I   +      +II +FF+  R
Sbjct: 122 NLTIKW-LYNDECSKIITNFFQNIR 145


>gi|269792349|ref|YP_003317253.1| CMP/dCMP deaminase zinc-binding protein [Thermanaerovibrio
           acidaminovorans DSM 6589]
 gi|269099984|gb|ACZ18971.1| CMP/dCMP deaminase zinc-binding protein [Thermanaerovibrio
           acidaminovorans DSM 6589]
          Length = 153

 Score =  185 bits (471), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 50/143 (34%), Positives = 70/143 (48%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  AL EA+ A    ++PVGAV V+N  ++ R  N      D   HAE++AIR  C  L
Sbjct: 3   FMREALREAELAMEAGDVPVGAVVVMNGLVVGRGRNVRELTGDPLGHAEMVAIRDACSAL 62

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L    LYVTLEPC MCA AI   RI  +++   +PK G + +              
Sbjct: 63  GTWRLDGASLYVTLEPCVMCAGAILQCRISEVHFALRDPKAGAVGSLYDVLRDPRQPFRC 122

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
            ++ G    RS  +++ FF+  R
Sbjct: 123 RVHQGEMRDRSAALLRGFFEGLR 145


>gi|313891940|ref|ZP_07825541.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Dialister microaerophilus UPII 345-E]
 gi|313119583|gb|EFR42774.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Dialister microaerophilus UPII 345-E]
          Length = 149

 Score =  185 bits (471), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 55/147 (37%), Positives = 88/147 (59%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
               +M+ A++EA+ A + NE+P+GA+    + II+ + N   + K++  HAEILAI+  
Sbjct: 2   NDKDYMTLAIQEAKKAYMNNEMPIGAIITYKDIIIANSYNECEKNKNIFDHAEILAIKKA 61

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
            ++L+   L    LYVT+EPC MCA AI  +RI RL +GA N   GGI +  +    ++ 
Sbjct: 62  SKLLNTSRLTGCTLYVTIEPCPMCAGAIMHSRIDRLVFGAFNNLYGGIISKYKIGKDSSM 121

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H+  +  GI E   +Q++ DFFK +R
Sbjct: 122 NHTLSVVSGIEENTCKQLVCDFFKNKR 148


>gi|297627118|ref|YP_003688881.1| CMP/dCMP deaminase, zinc-binding [Propionibacterium freudenreichii
           subsp. shermanii CIRM-BIA1]
 gi|296922883|emb|CBL57463.1| CMP/dCMP deaminase, zinc-binding [Propionibacterium freudenreichii
           subsp. shermanii CIRM-BIA1]
          Length = 159

 Score =  185 bits (470), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 54/128 (42%), Positives = 72/128 (56%), Gaps = 1/128 (0%)

Query: 23  EIPVGAVAVLNNKII-SRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81
           ++PVGAV +  N ++    GNR  +  D TAHAE+LAIR  C       L +  L VTLE
Sbjct: 32  DVPVGAVVLDGNGVLLGEGGNRREQDGDATAHAEVLAIRAACARRGAWRLDDCTLVVTLE 91

Query: 82  PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141
           PCTMCA A+  ARIRRL +GA +PK G I +          +H  E+  GI     ++++
Sbjct: 92  PCTMCAGALVNARIRRLVFGAFDPKAGAIASLWDVVRDPRLNHRVEVVGGIMADDCQRVL 151

Query: 142 QDFFKERR 149
            DFF  RR
Sbjct: 152 TDFFATRR 159


>gi|313887628|ref|ZP_07821310.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Peptoniphilus harei ACS-146-V-Sch2b]
 gi|312846237|gb|EFR33616.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Peptoniphilus harei ACS-146-V-Sch2b]
          Length = 150

 Score =  185 bits (470), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 60/144 (41%), Positives = 82/144 (56%), Gaps = 1/144 (0%)

Query: 6   VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
            FM  AL   + + L +++P+G V V NNKII    N+  +LK+ TAHAEI+AI M  R 
Sbjct: 4   KFMKEALRYGRRSLLSDDVPIGCVVVKNNKIIGYGYNKKEDLKNPTAHAEIMAISMAARH 63

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           L+   L   D+YVTLEPC MC  AI  ARI+ LY+GA N + G + +  +   L T +H 
Sbjct: 64  LNSYHLEGCDIYVTLEPCLMCVGAILNARIKNLYFGARNKRFGAVVSHQKIEKLIT-NHR 122

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
                GI E+    +I  FF + R
Sbjct: 123 INYEYGILERECASLITGFFSDLR 146


>gi|325479006|gb|EGC82107.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Anaerococcus prevotii ACS-065-V-Col13]
          Length = 169

 Score =  185 bits (470), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 56/148 (37%), Positives = 75/148 (50%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           K    FM  A+ EA+ A    E+PVGAV V   +II R  N   + K    HAEI+AI+ 
Sbjct: 14  KMDMFFMQEAISEARLARFVEEVPVGAVIVYKGEIIGRGHNYTYKGKSALKHAEIMAIKE 73

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
               +    L E  +YVT+EPC+MCA AI  +RI RL  G  +PK G   + T      +
Sbjct: 74  ASEYMDDFRLEECTMYVTMEPCSMCAGAIINSRIDRLVIGIRDPKRGACGSNTNVTGDRS 133

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
             H  +   G+SE+     IQ FF+  R
Sbjct: 134 QLHYLDAEFGLSEEECLYEIQTFFRYLR 161


>gi|238026935|ref|YP_002911166.1| CMP/dCMP deaminase, zinc-binding [Burkholderia glumae BGR1]
 gi|237876129|gb|ACR28462.1| CMP/dCMP deaminase, zinc-binding [Burkholderia glumae BGR1]
          Length = 202

 Score =  185 bits (470), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 50/140 (35%), Positives = 71/140 (50%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           ++   FM  AL  A  A    E+PVGAV V  +++I+R  N      D +AHAE+ A+R 
Sbjct: 30  ERDRRFMRLALAAADAARAAGEVPVGAVLVRGDQVIARGFNHPISGHDPSAHAEMAALRE 89

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
               L    LP  +LYVTLEPC MC+ AI  ARI R+ YGA++PK G   +    +    
Sbjct: 90  AAHTLGNYRLPGCELYVTLEPCLMCSGAIMHARIARVVYGAADPKTGACGSVVDAFANPQ 149

Query: 122 CHHSPEIYPGISEQRSRQII 141
            +H   +  G+        +
Sbjct: 150 LNHHTSVTGGVLADECGHTL 169


>gi|116250665|ref|YP_766503.1| nitrogen fixation symbiosis related protein [Rhizobium
           leguminosarum bv. viciae 3841]
 gi|115255313|emb|CAK06388.1| putative nitrogen fixation symbiosis related protein [Rhizobium
           leguminosarum bv. viciae 3841]
          Length = 151

 Score =  185 bits (470), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 91/147 (61%), Positives = 112/147 (76%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
           K N FM  ALEEA+ A  R E+P+GAV V+++  +SR+GNR RELKDVTAHAEI AIR+ 
Sbjct: 2   KTNRFMEMALEEARAAGERGEVPIGAVVVVDDIAVSRSGNRTRELKDVTAHAEIAAIRLA 61

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
           C  L QE L   DLYVTLEPCTMCAAAIS ARIRRLYYGA +PKGG ++NG +FY   TC
Sbjct: 62  CEALGQERLVGADLYVTLEPCTMCAAAISFARIRRLYYGAEDPKGGAVDNGVRFYGQPTC 121

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           HH+PE+Y G +E +S  +++ FF +RR
Sbjct: 122 HHAPEVYSGFNEVQSADLLRKFFSQRR 148


>gi|52841949|ref|YP_095748.1| deaminase [Legionella pneumophila subsp. pneumophila str.
           Philadelphia 1]
 gi|52629060|gb|AAU27801.1| deaminase [Legionella pneumophila subsp. pneumophila str.
           Philadelphia 1]
          Length = 141

 Score =  185 bits (470), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 53/143 (37%), Positives = 73/143 (51%), Gaps = 3/143 (2%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  A E+A  A    E+PVGAV V  +N+++    N   +  D + HAEI AIR   R L
Sbjct: 1   MQLAYEQAVIARNEGEVPVGAVLVSKDNQLLGVGRNVIEKSHDPSDHAEIRAIRQASRKL 60

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
           +   L +  LYVTLEPC MCA  +  ARI+RL +   + K G   +          +HS 
Sbjct: 61  NNHRLLDTTLYVTLEPCVMCAGLMVHARIKRLVFATRDFKTGAAGSMFNVL--HALNHSV 118

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
            I  GI +    Q++ DFF+  R
Sbjct: 119 LIDEGIMQAECSQLLSDFFRNLR 141


>gi|13476818|ref|NP_108387.1| nitrogen fixation protein gene [Mesorhizobium loti MAFF303099]
 gi|14027579|dbj|BAB53848.1| nitrogen fixation protein gene [Mesorhizobium loti MAFF303099]
          Length = 149

 Score =  185 bits (470), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 74/129 (57%), Positives = 94/129 (72%)

Query: 21  RNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80
           R E+PVGAV    + ++++AGNR REL D TAHAE+L IR  C  LS E L   DLYVTL
Sbjct: 20  RGEVPVGAVIANGSTVVAKAGNRTRELADPTAHAEMLVIREACGKLSSERLTGHDLYVTL 79

Query: 81  EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140
           EPC MCA AIS AR+RRLY+GA + KGG + NG +F+   TCHH+P+IYPG+ E  +  +
Sbjct: 80  EPCAMCAGAISFARLRRLYFGAPDEKGGAVVNGVRFFASPTCHHTPDIYPGMGETEAALL 139

Query: 141 IQDFFKERR 149
           ++DFFKERR
Sbjct: 140 LKDFFKERR 148


>gi|303232398|ref|ZP_07319090.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Atopobium vaginae PB189-T1-4]
 gi|302481482|gb|EFL44550.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Atopobium vaginae PB189-T1-4]
          Length = 164

 Score =  185 bits (470), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 57/148 (38%), Positives = 79/148 (53%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           +    FM  AL EA+ AA  NE+P+GAV V N  II+RA N   E  +   HAE LA++ 
Sbjct: 16  EADEAFMRAALAEARAAAAENEVPIGAVVVYNGAIIARAHNTREESTNPAGHAEFLAMQH 75

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
               L +  L    +YVTLEPC MCA  +  ARI R  Y AS+PK G +           
Sbjct: 76  AAETLQRWRLFGCTVYVTLEPCLMCAGLMLNARIDRCVYAASDPKAGAVGTLYNVSNDFR 135

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H   +  G+ +  + +++QDFF+ RR
Sbjct: 136 LNHKFMVTTGVLQGEAVELLQDFFRHRR 163


>gi|121714253|ref|XP_001274737.1| cytidine and deoxycytidylate deaminase zinc-binding domain protein
           [Aspergillus clavatus NRRL 1]
 gi|119402891|gb|EAW13311.1| cytidine and deoxycytidylate deaminase zinc-binding domain protein
           [Aspergillus clavatus NRRL 1]
          Length = 191

 Score =  185 bits (470), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 43/145 (29%), Positives = 73/145 (50%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
               FM  AL   + A    E PVG V V + ++I    N   +  + T HAE +AI   
Sbjct: 17  THAYFMKQALLMGEKALEIGETPVGCVLVRDGQLIGSGMNDTNKSMNGTRHAEFIAIEEM 76

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
            R   + +L   DLYVT+EPC MCA+A+   +IR +Y+G +N + GG  +    ++  T 
Sbjct: 77  LRSHPRSLLRSTDLYVTVEPCVMCASALRQYQIRSVYFGCANERFGGTGSILSLHSDPTL 136

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKE 147
                ++ G+  + +  +++ F+ +
Sbjct: 137 DPPYPVHGGLFREEAIMLLRRFYIQ 161


>gi|239989276|ref|ZP_04709940.1| putative deaminase [Streptomyces roseosporus NRRL 11379]
          Length = 174

 Score =  185 bits (470), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 43/126 (34%), Positives = 66/126 (52%), Gaps = 1/126 (0%)

Query: 22  NEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80
            ++PVGAV +  +   ++   N      D TAHAEILA+R     + +  L +  L VTL
Sbjct: 47  GDVPVGAVVLGPDGTELATGHNEREATGDPTAHAEILALRRAAEAVGEWRLTDCTLVVTL 106

Query: 81  EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140
           EPCTMCA A+  +R+ R+ YGA + K G   +          +H PE+  G+ E+   + 
Sbjct: 107 EPCTMCAGALVQSRVARVVYGARDEKAGAAGSLWDVIRDRRLNHRPEVIAGVLERECAEQ 166

Query: 141 IQDFFK 146
           +  FF+
Sbjct: 167 LTAFFR 172


>gi|330470612|ref|YP_004408355.1| CMP/dCMP deaminase [Verrucosispora maris AB-18-032]
 gi|328813583|gb|AEB47755.1| CMP/dCMP deaminase [Verrucosispora maris AB-18-032]
          Length = 200

 Score =  184 bits (469), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 49/153 (32%), Positives = 76/153 (49%), Gaps = 8/153 (5%)

Query: 2   KKGNVFMSCALEEAQNA-------ALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAH 53
           ++  ++M  ALE A             +++PVGAV    +   ++   N      D TAH
Sbjct: 48  QRHELWMRRALEVAVTGPAVADPSGQADDVPVGAVLYGPDGDELAIGRNERELTGDPTAH 107

Query: 54  AEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENG 113
           AE+LA+R G   L +  L    L VTLEPCTMCA A+ L+R+  + +GA  PK G   + 
Sbjct: 108 AEVLALRRGAERLGRWRLDGCILVVTLEPCTMCAGALVLSRVSTVVFGAWEPKTGAAGSL 167

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
                    +H PE+Y G+    +  +++ FF+
Sbjct: 168 WDVLRDRRLNHRPEVYGGVLATETGTVMRAFFR 200


>gi|296819611|ref|XP_002849875.1| tRNA specific adenosine deaminase [Arthroderma otae CBS 113480]
 gi|238840328|gb|EEQ29990.1| tRNA specific adenosine deaminase [Arthroderma otae CBS 113480]
          Length = 190

 Score =  184 bits (469), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 50/144 (34%), Positives = 74/144 (51%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
            K  VFM  AL+ A+ A    E PVG V V   ++I    N   +  + T HAE LAI  
Sbjct: 9   SKHEVFMKMALKMAETALAAGETPVGCVLVNKGRVIGSGMNDTNKSLNGTRHAEFLAIEE 68

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
             R   + I  E DLYVT+EPC MCA+A+   RIR +Y+G +N + GG       ++ + 
Sbjct: 69  ALRSHPRSIFRETDLYVTVEPCIMCASALRQYRIRSVYFGCANERFGGTGGVLTLHSDSA 128

Query: 122 CHHSPEIYPGISEQRSRQIIQDFF 145
                 +Y GI  + +  +++ F+
Sbjct: 129 IDPPYPVYGGIFRKEAIMLLRQFY 152


>gi|229496208|ref|ZP_04389928.1| cytidine/deoxycytidylate deaminase family protein [Porphyromonas
           endodontalis ATCC 35406]
 gi|229316786|gb|EEN82699.1| cytidine/deoxycytidylate deaminase family protein [Porphyromonas
           endodontalis ATCC 35406]
          Length = 151

 Score =  184 bits (469), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 54/148 (36%), Positives = 74/148 (50%), Gaps = 5/148 (3%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
            +    M  AL+EA  A    E+P+GAV V   +I+ R  NR  +L+D TAHAEILAI  
Sbjct: 9   TEDERAMRAALDEAYLAKEAGEVPIGAVVVYQGRIVGRGRNRVEQLQDPTAHAEILAITA 68

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
               L  + L +  LYV+LEPC MC  A+  A++ R+ Y  S+PK G             
Sbjct: 69  ATENLGAKYLTDCTLYVSLEPCVMCMGALRWAQVSRIVYATSDPKAG-----YHVLAPKA 123

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            H    I  G     +  +++ FF ERR
Sbjct: 124 PHPRAVIEVGPFGDEAAGLLRSFFSERR 151


>gi|206901944|ref|YP_002250953.1| tRNA-specific adenosine deaminase [Dictyoglomus thermophilum
           H-6-12]
 gi|206741047|gb|ACI20105.1| tRNA-specific adenosine deaminase [Dictyoglomus thermophilum
           H-6-12]
          Length = 156

 Score =  184 bits (469), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 55/147 (37%), Positives = 75/147 (51%), Gaps = 4/147 (2%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
            + FM  A++EA+ A  + E+PVGAV V N KII R  N     K    HAEI+AI    
Sbjct: 9   DSFFMHEAIKEAEKALKKGEVPVGAVVVFNEKIIGRGYNLRETKKSPILHAEIIAIEKAV 68

Query: 64  RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENG-TQFYTLATC 122
           + ++   L    LYVTLEPC MC  AI  +RI RL YG  N + G  +      Y     
Sbjct: 69  KKINDWRLYNCTLYVTLEPCIMCFGAILNSRIDRLVYGTENLEEGFTKFLNVDNYRKWQL 128

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
               EI  G+ + +   ++++FFK  R
Sbjct: 129 R---EIISGVEKDKCEALLKEFFKNVR 152


>gi|90021123|ref|YP_526950.1| tRNA-adenosine deaminase [Saccharophagus degradans 2-40]
 gi|89950723|gb|ABD80738.1| tRNA-adenosine deaminase [Saccharophagus degradans 2-40]
          Length = 176

 Score =  184 bits (469), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 60/146 (41%), Positives = 81/146 (55%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
              +M  AL+ A+ AA  +E+PVGAV V +NKI+    N      D TAHAEI A+R   
Sbjct: 8   DEHWMREALKLAELAAAEHEVPVGAVVVRDNKILGSGFNTPISGCDPTAHAEITALRQAA 67

Query: 64  RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123
           +      LP+  LYVT+EPCTMC  AI  AR+ R+ YGA+ PK G I +   +      +
Sbjct: 68  KNEHNYRLPDATLYVTIEPCTMCLGAIMHARVARVVYGATEPKAGVIYSNPVWQQGGFFN 127

Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149
           H  E   G+    +  +IQ FFK+RR
Sbjct: 128 HQVEWCGGVLANEATALIQQFFKQRR 153


>gi|317132506|ref|YP_004091820.1| CMP/dCMP deaminase zinc-binding protein [Ethanoligenens harbinense
           YUAN-3]
 gi|315470485|gb|ADU27089.1| CMP/dCMP deaminase zinc-binding protein [Ethanoligenens harbinense
           YUAN-3]
          Length = 160

 Score =  184 bits (469), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 54/146 (36%), Positives = 77/146 (52%), Gaps = 1/146 (0%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
              +M  ALE+A+ A    E+P+GAV V +   ++   NR     +  AHAE  AIR  C
Sbjct: 9   HETWMRLALEQAERAGREGEVPIGAVIVKDGAALAVGRNRRETDHNALAHAEAEAIRAAC 68

Query: 64  RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123
             L    L    LYVTLEPC MCA AI  AR+  + +GA +PK G   +    ++    +
Sbjct: 69  AALGSWRLSGCTLYVTLEPCPMCAGAIINARVDTVVFGAYDPKAGASGSVIDLFSCP-FN 127

Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149
           H P +  G+ E+  R+++QDFF   R
Sbjct: 128 HHPAVMGGVLEEDCRRLLQDFFAGLR 153


>gi|154496071|ref|ZP_02034767.1| hypothetical protein BACCAP_00355 [Bacteroides capillosus ATCC
           29799]
 gi|150274626|gb|EDN01690.1| hypothetical protein BACCAP_00355 [Bacteroides capillosus ATCC
           29799]
          Length = 256

 Score =  184 bits (469), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 55/147 (37%), Positives = 80/147 (54%), Gaps = 1/147 (0%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
               +M  AL+ A+ A    E+PVG V V   +++ R  NR  E KD  AHAE++AI   
Sbjct: 2   DHEGYMRQALDLAREAMEAGEVPVGCVVVWEGRVVGRGRNRREENKDALAHAELMAIHEA 61

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
            + L    L + DLYVTLEPC MCA  I  ARI R++YGA + + G   +    ++    
Sbjct: 62  NQTLGGWRLHKADLYVTLEPCAMCAGGIVNARIPRVWYGAEDTRFGACGSALDVFSAP-L 120

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H P++  GI  + S  ++Q FF+  R
Sbjct: 121 NHRPQVTGGILAEESLALMQQFFQRLR 147


>gi|297568295|ref|YP_003689639.1| CMP/dCMP deaminase zinc-binding protein [Desulfurivibrio
           alkaliphilus AHT2]
 gi|296924210|gb|ADH85020.1| CMP/dCMP deaminase zinc-binding protein [Desulfurivibrio
           alkaliphilus AHT2]
          Length = 161

 Score =  184 bits (469), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 53/148 (35%), Positives = 81/148 (54%), Gaps = 1/148 (0%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           K    M  ALE A+ AA R E+PVGA+ +    +I++  GNR     D + HAEI+ +R 
Sbjct: 13  KDTSLMHQALEAARAAAARGEVPVGALLIDRQGEILAVDGNRTIGDHDPSGHAEIVVLRR 72

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
               +    L    LYVTLEPC MC   +  ARI RL +GA++PK G + +  +      
Sbjct: 73  AAARIGNHRLTGTTLYVTLEPCLMCVGVMIQARIERLVFGANDPKAGAVVSLYRLAADPR 132

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H  ++  G+  + + Q+++DFF+ RR
Sbjct: 133 LNHRLQVTAGVLARDAGQLLRDFFRARR 160


>gi|21222441|ref|NP_628220.1| deaminase [Streptomyces coelicolor A3(2)]
 gi|289770376|ref|ZP_06529754.1| deaminase [Streptomyces lividans TK24]
 gi|13122131|emb|CAC32309.1| putative deaminase [Streptomyces coelicolor A3(2)]
 gi|289700575|gb|EFD68004.1| deaminase [Streptomyces lividans TK24]
          Length = 143

 Score =  184 bits (468), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 46/128 (35%), Positives = 68/128 (53%), Gaps = 2/128 (1%)

Query: 23  EIPVGAVAVLNNK--IISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80
           ++PVGAV +  +   ++S   N      D TAHAE+LAIR     L +  L    L VTL
Sbjct: 16  DVPVGAVVLAPDGRTVLSAGHNEREATGDPTAHAEVLAIRRAAGELGEWRLSGCTLVVTL 75

Query: 81  EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140
           EPCTMCA A+  +R+ R+ YGA + K G   +          +H PE+  G+      ++
Sbjct: 76  EPCTMCAGALVQSRVDRVVYGARDDKAGAAGSLWDVVRDRRLNHRPEVIEGVLADDCARL 135

Query: 141 IQDFFKER 148
           + DFF++R
Sbjct: 136 LTDFFRDR 143


>gi|198274233|ref|ZP_03206765.1| hypothetical protein BACPLE_00373 [Bacteroides plebeius DSM 17135]
 gi|198272908|gb|EDY97177.1| hypothetical protein BACPLE_00373 [Bacteroides plebeius DSM 17135]
          Length = 144

 Score =  184 bits (468), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 58/149 (38%), Positives = 83/149 (55%), Gaps = 5/149 (3%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M   + +M  AL EA  AA R E+PVGAV V  ++I++RA N    L DVTAHAE+ A+ 
Sbjct: 1   MADDSFYMKQALAEAARAAERGEVPVGAVVVCRDRILARAHNLTETLHDVTAHAEMQALT 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
                L  + L +  LYVT+EPC MCA AI+ +++ RL +GA + K G      Q Y   
Sbjct: 61  AAANSLGAKYLTDCTLYVTVEPCVMCAGAIAWSQVGRLVFGAEDEKRG-----YQRYAPQ 115

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             H    +  G+       +++DFF++RR
Sbjct: 116 ALHPKTVVVKGVLADECAGLMKDFFRKRR 144


>gi|331005351|ref|ZP_08328736.1| tRNA-specific adenosine-34 deaminase [gamma proteobacterium
           IMCC1989]
 gi|330420848|gb|EGG95129.1| tRNA-specific adenosine-34 deaminase [gamma proteobacterium
           IMCC1989]
          Length = 158

 Score =  184 bits (468), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 66/148 (44%), Positives = 80/148 (54%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           K    +M  AL  AQ AA  +EIPVGAV V +N+II    N+   L D TAHAEI A+R 
Sbjct: 4   KDDCYWMQQALLLAQQAAGMDEIPVGAVVVKDNEIIGSGFNQPISLCDPTAHAEIQALRN 63

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
               +    L    LYVTLEPC MCA AI  +RI RL YGA+ PK G I + TQ    A 
Sbjct: 64  AANHIGNYRLNSATLYVTLEPCGMCAGAIVHSRIARLVYGATEPKAGVIVSQTQQLDKAY 123

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H      G+  +   +II  FF  RR
Sbjct: 124 LNHKVLYQGGVCAEECSEIISVFFSRRR 151


>gi|281202068|gb|EFA76273.1| adenosine deaminase [Polysphondylium pallidum PN500]
          Length = 213

 Score =  184 bits (468), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 49/153 (32%), Positives = 80/153 (52%), Gaps = 8/153 (5%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           ++K + FM  AL EA+ A    E+PVG V V N+ +I+   N+    K+ T HAEI A+ 
Sbjct: 25  IEKHSKFMKLALNEAKKALDEGEVPVGCVIVHNDIVIAAGSNKTNIKKNATRHAEIEALD 84

Query: 61  ------MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGT 114
                    +    ++L +  LYVT+EPC MCAA + LA+I  +Y+G  N K GG  +  
Sbjct: 85  SIYLSENASKFGGDKLLSDCKLYVTVEPCIMCAAVLQLAKINIVYFGCYNDKFGGNGSIL 144

Query: 115 QFYTLATC--HHSPEIYPGISEQRSRQIIQDFF 145
             +++      H      G+ + ++  ++Q F+
Sbjct: 145 PVHSIDCFERGHPYNCVSGVMKDQAIHLLQKFY 177


>gi|85705168|ref|ZP_01036268.1| hypothetical protein ROS217_04635 [Roseovarius sp. 217]
 gi|85670490|gb|EAQ25351.1| hypothetical protein ROS217_04635 [Roseovarius sp. 217]
          Length = 147

 Score =  184 bits (468), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 81/143 (56%), Positives = 102/143 (71%), Gaps = 1/143 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKI-ISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  AL+EA+ AALR E+PVGAV V  + + ++RAGNR REL D TAHAEILAIR  C  L
Sbjct: 1   METALDEARAAALRGEVPVGAVIVAPSGVLVARAGNRTRELSDPTAHAEILAIRAACAAL 60

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
             E L   DLYVTLEPC MCA+AI+ ARI RLYYGA++PK GG+  G + ++   CHH P
Sbjct: 61  GSERLTGHDLYVTLEPCAMCASAIASARIARLYYGAADPKSGGVAMGARVFSHPQCHHVP 120

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           EIY GI+   S  +++ FF++RR
Sbjct: 121 EIYDGIAATESETLLKTFFRDRR 143


>gi|51473999|ref|YP_067756.1| cytosine aminohydrolase [Rickettsia typhi str. Wilmington]
 gi|81610850|sp|Q68Y02|Y819_RICTY RecName: Full=Uncharacterized deaminase RT0819
 gi|51460311|gb|AAU04274.1| Cytosine aminohydrolase [Rickettsia typhi str. Wilmington]
          Length = 148

 Score =  183 bits (467), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 64/144 (44%), Positives = 96/144 (66%), Gaps = 2/144 (1%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVL--NNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M  AL++A+ A  +NE+PVG V V   N KII  + N   E  +   HAEI+AI   C +
Sbjct: 1   MEQALKQARLAFDKNEVPVGVVIVYRLNQKIIVSSHNNIEEKNNALCHAEIIAINEACNL 60

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           +S + L + D+YVTLEPC MCA+AIS +R++RL+YGAS+ K G +E+  +++  + C H 
Sbjct: 61  ISSKNLNDYDIYVTLEPCAMCASAISHSRLKRLFYGASDSKQGAVESNLRYFNSSACFHR 120

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
           PEIY GI  + SR ++++FF++ R
Sbjct: 121 PEIYSGILSEHSRFLMKEFFQKMR 144


>gi|169599362|ref|XP_001793104.1| hypothetical protein SNOG_02499 [Phaeosphaeria nodorum SN15]
 gi|111069591|gb|EAT90711.1| hypothetical protein SNOG_02499 [Phaeosphaeria nodorum SN15]
          Length = 265

 Score =  183 bits (467), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 45/142 (31%), Positives = 69/142 (48%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
              FM  A+  A+ A   +E PVG V V + +II R  N      + T HAE +AI    
Sbjct: 70  HERFMREAIAMAELALKSDETPVGCVFVKDGEIIGRGMNETNRTLNGTRHAEFVAIAGIL 129

Query: 64  RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123
                +IL E DLYVT+EPC MCA+ +    IR +Y+G  N + GG       ++  +  
Sbjct: 130 SKSPVKILNETDLYVTVEPCVMCASMLRQYGIRAVYFGCWNERFGGTGGVLNIHSDPSID 189

Query: 124 HSPEIYPGISEQRSRQIIQDFF 145
               +  GI  + +  +++ F+
Sbjct: 190 KPYPVTGGIFREEAIMLLRKFY 211


>gi|228470550|ref|ZP_04055407.1| cytidine/deoxycytidylate deaminase family protein [Porphyromonas
           uenonis 60-3]
 gi|228307677|gb|EEK16653.1| cytidine/deoxycytidylate deaminase family protein [Porphyromonas
           uenonis 60-3]
          Length = 155

 Score =  183 bits (467), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 50/146 (34%), Positives = 82/146 (56%), Gaps = 5/146 (3%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
               M  AL++A  A   +E+P+GAV  +  +I++++ N+   L D TAHAE+LAI    
Sbjct: 12  DERMMQLALQQALVAYEADEVPIGAVIAVGTRILAKSHNQVELLNDPTAHAEMLAITQAT 71

Query: 64  RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123
             +  + LP+  LYVT+EPC MC  A+   +I R+ YGA++PKGG        Y+    H
Sbjct: 72  AAIGGKYLPQCTLYVTVEPCPMCMGALRWTQIGRIVYGAADPKGG-----YMRYSSTLPH 126

Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149
               +  G+ E+  R+++  +F+ +R
Sbjct: 127 PKSVVMGGVCEEECRELMVSYFQRKR 152


>gi|166712352|ref|ZP_02243559.1| hypothetical protein Xoryp_13070 [Xanthomonas oryzae pv. oryzicola
           BLS256]
          Length = 170

 Score =  183 bits (467), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 50/148 (33%), Positives = 74/148 (50%), Gaps = 2/148 (1%)

Query: 4   GNVFMSCALEEAQNA-ALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRM 61
              +M  AL  A+ A    +EIPVGA+ +     ++    N N    D +AHAEI+A+R 
Sbjct: 16  DVHWMQHALHLAECAERDHDEIPVGALILGAEGNVLGEGWNFNIASHDPSAHAEIVAMRD 75

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
             R LS   L    LYVTLEPC MCA A+  ARI R+ + AS+PK G   +         
Sbjct: 76  AGRRLSNHRLIGCTLYVTLEPCAMCAMAMIHARIARVVFAASDPKTGACGSVFDLLADPR 135

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H   +  G+    +   + ++F+ +R
Sbjct: 136 HNHRVRVCGGVLAAEASLRLTNYFRAKR 163


>gi|294787884|ref|ZP_06753128.1| tRNA-specific adenosine deaminase [Simonsiella muelleri ATCC 29453]
 gi|294484177|gb|EFG31860.1| tRNA-specific adenosine deaminase [Simonsiella muelleri ATCC 29453]
          Length = 240

 Score =  183 bits (467), Expect = 6e-45,   Method: Composition-based stats.
 Identities = 53/128 (41%), Positives = 68/128 (53%)

Query: 22  NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81
            EIPVGA+ +   KII++A N       V  HAEI  I    +IL    L E DLYVTLE
Sbjct: 112 GEIPVGAILLHQGKIIAQAHNLCVAGHSVCQHAEIQVIEQAGKILQNYRLDECDLYVTLE 171

Query: 82  PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141
           PC MCA AI  ARIRRL + A  PK G   +    +     +    +  GI    S+ I+
Sbjct: 172 PCAMCAGAIVQARIRRLIFAAPEPKMGAAGSVLNIFANKRLNSHTAVKSGILADESKAIL 231

Query: 142 QDFFKERR 149
           Q FF+++R
Sbjct: 232 QQFFQQKR 239


>gi|189204912|ref|XP_001938791.1| tRNA-specific adenosine deaminase subunit TAD2 [Pyrenophora
           tritici-repentis Pt-1C-BFP]
 gi|187985890|gb|EDU51378.1| tRNA-specific adenosine deaminase subunit TAD2 [Pyrenophora
           tritici-repentis Pt-1C-BFP]
          Length = 234

 Score =  183 bits (467), Expect = 6e-45,   Method: Composition-based stats.
 Identities = 45/142 (31%), Positives = 68/142 (47%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
              FM  A+  A+ A   +E PVG V V + +II R  N      + T HAE +AI    
Sbjct: 9   HEGFMREAIAMAELALKSDETPVGCVFVKDGEIIGRGMNETNRTLNGTRHAEFVAIAGIL 68

Query: 64  RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123
                 IL E DLYVT+EPC MCA+ +    IR +Y+G  N + GG       ++  +  
Sbjct: 69  SKHPISILNETDLYVTVEPCVMCASMLRQYGIRAVYFGCWNERFGGTGGVLNIHSDPSVD 128

Query: 124 HSPEIYPGISEQRSRQIIQDFF 145
               +  GI  + +  +++ F+
Sbjct: 129 KPYPVTGGIFREEAIMLLRKFY 150


>gi|317485386|ref|ZP_07944265.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Bilophila wadsworthia 3_1_6]
 gi|316923345|gb|EFV44552.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Bilophila wadsworthia 3_1_6]
          Length = 189

 Score =  183 bits (467), Expect = 6e-45,   Method: Composition-based stats.
 Identities = 50/143 (34%), Positives = 76/143 (53%), Gaps = 1/143 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  A+ +A+ A  + E+PVGA+ V     I++   N+   L D +AHAEI+A+R    +L
Sbjct: 47  MLQAIAKARQAPQQGEVPVGALIVDPAGTILAAEHNQPITLSDPSAHAEIMAMRSAGAVL 106

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L    L VTLEPC MC  AI  AR+  + YGA++ K G +E+      L   +H  
Sbjct: 107 GNYRLEGCILVVTLEPCLMCTGAIVHARLAGVVYGAADNKAGAVESCFNGLDLPFHNHRV 166

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
               GI+      ++Q+FF++ R
Sbjct: 167 WHMGGIAAPECASLLQNFFQKSR 189


>gi|218515307|ref|ZP_03512147.1| cytosine deaminase protein [Rhizobium etli 8C-3]
          Length = 170

 Score =  183 bits (466), Expect = 6e-45,   Method: Composition-based stats.
 Identities = 90/147 (61%), Positives = 112/147 (76%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
           K N FM  ALEEA+ A  R E+P+GAV V+++  +SR+GNR REL DVTAHAEI AIR+ 
Sbjct: 5   KTNRFMEMALEEARAAGERGEVPIGAVVVVDDIAVSRSGNRTRELNDVTAHAEIAAIRLA 64

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
           C  L QE L   DLYVTLEPCTMCAAAIS ARI RLYYGA +PKGG ++NG +FYT  TC
Sbjct: 65  CEALGQERLAGADLYVTLEPCTMCAAAISFARIHRLYYGAEDPKGGAVDNGVRFYTQPTC 124

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           HH+PE+Y G +E +S +I++ FF ++R
Sbjct: 125 HHAPEVYSGFNEVQSAEILRTFFLQKR 151


>gi|304439146|ref|ZP_07399064.1| tRNA-specific adenosine deaminase [Peptoniphilus duerdenii ATCC
           BAA-1640]
 gi|304372278|gb|EFM25866.1| tRNA-specific adenosine deaminase [Peptoniphilus duerdenii ATCC
           BAA-1640]
          Length = 147

 Score =  183 bits (466), Expect = 6e-45,   Method: Composition-based stats.
 Identities = 51/142 (35%), Positives = 71/142 (50%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  AL  A+ +  R EIPVGAV VL+ K++    N    L D T HAE+ A++M  + L 
Sbjct: 1   MKFALHLAKKSYRRGEIPVGAVVVLHGKVVGYGYNLKETLNDATEHAELRALKMAAKTLG 60

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
              L    +Y TLEPC MCA A+ L RI +L  GA +P+ G   +          +H  +
Sbjct: 61  TYHLEGTKMYTTLEPCAMCAGAMILFRIDKLIIGAKSPRMGAAGSNLNILDREGFNHKVK 120

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
           +   I      ++I  FFK  R
Sbjct: 121 VEYSIYGDECSKLISKFFKNVR 142


>gi|329121024|ref|ZP_08249655.1| tRNA-specific adenosine deaminase [Dialister micraerophilus DSM
           19965]
 gi|327471186|gb|EGF16640.1| tRNA-specific adenosine deaminase [Dialister micraerophilus DSM
           19965]
          Length = 149

 Score =  183 bits (466), Expect = 6e-45,   Method: Composition-based stats.
 Identities = 54/146 (36%), Positives = 87/146 (59%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
               +M+ A++EA+ A + NE+P+GA+    + II+ + N   + K++  HAEILAI+  
Sbjct: 2   NDKDYMTLAIQEAKKAYMNNEMPIGAIITYKDIIIANSYNECEKNKNIFDHAEILAIKKA 61

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
            ++L+   L    LYVT+EPC MCA AI  +RI RL +GA N   GGI +  +    ++ 
Sbjct: 62  SKLLNTSRLTGCTLYVTIEPCPMCAGAIMHSRIDRLVFGAFNDLYGGIISKYKIGKDSSM 121

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKER 148
           +H+  +  GI E   +Q++ DFFK +
Sbjct: 122 NHTLSVVSGIEENTCKQLVCDFFKNK 147


>gi|313886388|ref|ZP_07820111.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Porphyromonas asaccharolytica PR426713P-I]
 gi|332300169|ref|YP_004442090.1| CMP/dCMP deaminase zinc-binding protein [Porphyromonas
           asaccharolytica DSM 20707]
 gi|312924164|gb|EFR34950.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Porphyromonas asaccharolytica PR426713P-I]
 gi|332177232|gb|AEE12922.1| CMP/dCMP deaminase zinc-binding protein [Porphyromonas
           asaccharolytica DSM 20707]
          Length = 153

 Score =  183 bits (466), Expect = 7e-45,   Method: Composition-based stats.
 Identities = 51/146 (34%), Positives = 82/146 (56%), Gaps = 5/146 (3%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
               M  AL++A  A   +E+P+GAV  +  +I++++ N+   L D TAHAE+LAI    
Sbjct: 12  DERMMQLALQQALVAYEADEVPIGAVIAVGTRILAKSHNQVELLNDPTAHAEMLAITQAT 71

Query: 64  RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123
             +  + LP+  LYVT+EPC MC  A+   +I R+ YG ++PKGG        Y+ A  H
Sbjct: 72  AAIGGKYLPQCTLYVTVEPCPMCMGALRWTQIGRIVYGTADPKGG-----YMHYSDALPH 126

Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149
               I  G+ E+  R+++  +F+ +R
Sbjct: 127 PKSIIVGGVCEEECRELMVSYFRRKR 152


>gi|260463254|ref|ZP_05811455.1| CMP/dCMP deaminase zinc-binding [Mesorhizobium opportunistum
           WSM2075]
 gi|259030844|gb|EEW32119.1| CMP/dCMP deaminase zinc-binding [Mesorhizobium opportunistum
           WSM2075]
          Length = 149

 Score =  183 bits (466), Expect = 7e-45,   Method: Composition-based stats.
 Identities = 72/129 (55%), Positives = 94/129 (72%)

Query: 21  RNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80
           R E+PVGAV      +++ AGNR REL D TAHAE+LAIR  C  L+ E L   DLYVTL
Sbjct: 20  RGEVPVGAVIASGGTVVASAGNRTRELADPTAHAEMLAIREACGKLATERLTGHDLYVTL 79

Query: 81  EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140
           EPC MCA AIS AR+RRLY+GA++ KGG + NG +F+   TCHH+P+IYPG++E  +  +
Sbjct: 80  EPCAMCAGAISFARLRRLYFGAADEKGGAVVNGVRFFASPTCHHAPDIYPGMAETEAGLL 139

Query: 141 IQDFFKERR 149
           ++ FF+ERR
Sbjct: 140 LKGFFRERR 148


>gi|258545205|ref|ZP_05705439.1| tRNA-specific adenosine deaminase [Cardiobacterium hominis ATCC
           15826]
 gi|258519557|gb|EEV88416.1| tRNA-specific adenosine deaminase [Cardiobacterium hominis ATCC
           15826]
          Length = 151

 Score =  183 bits (466), Expect = 7e-45,   Method: Composition-based stats.
 Identities = 53/129 (41%), Positives = 74/129 (57%), Gaps = 1/129 (0%)

Query: 22  NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81
            E+P+GA+ V N +II+ A NR     D TAHAEILA+R G + L    +  V LYVTLE
Sbjct: 21  GEVPIGAILVANGEIIASAHNRTVSDHDPTAHAEILALRAGGQALGNHRMRGVSLYVTLE 80

Query: 82  PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP-EIYPGISEQRSRQI 140
           PC MC  A+  ARI RL +GA + + G   +          +H   EI  G+ E+  R+ 
Sbjct: 81  PCIMCTGALIQARIDRLVFGAYDSRIGACGSAFDLARHRRLNHHIHEIKGGVLEEACREQ 140

Query: 141 IQDFFKERR 149
           +Q FF+++R
Sbjct: 141 LQRFFQQKR 149


>gi|329113789|ref|ZP_08242560.1| Putative deaminase [Acetobacter pomorum DM001]
 gi|326696799|gb|EGE48469.1| Putative deaminase [Acetobacter pomorum DM001]
          Length = 151

 Score =  183 bits (465), Expect = 8e-45,   Method: Composition-based stats.
 Identities = 57/143 (39%), Positives = 89/143 (62%), Gaps = 1/143 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  AL +A  AA   E+PVGAV + +   ++++AGNR  EL D +AHAE+L +R   +  
Sbjct: 7   MELALWQAHLAAANGEVPVGAVLLDSAGNVLAQAGNRVEELHDPSAHAEMLVMREAVQQR 66

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
             + L +  L+V+LEPC MCAAA++  R+ R+ +GA +PKGGG+E+G +        H  
Sbjct: 67  QGQKLADCTLFVSLEPCPMCAAAMAHFRLGRVVFGAYDPKGGGVEHGARLPHRPETLHRM 126

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+  G+ EQ S ++++ FF+  R
Sbjct: 127 EVIGGVREQESAEMLKTFFQTLR 149


>gi|256786485|ref|ZP_05524916.1| deaminase [Streptomyces lividans TK24]
          Length = 151

 Score =  183 bits (465), Expect = 8e-45,   Method: Composition-based stats.
 Identities = 46/128 (35%), Positives = 68/128 (53%), Gaps = 2/128 (1%)

Query: 23  EIPVGAVAVLNNK--IISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80
           ++PVGAV +  +   ++S   N      D TAHAE+LAIR     L +  L    L VTL
Sbjct: 24  DVPVGAVVLAPDGRTVLSAGHNEREATGDPTAHAEVLAIRRAAGELGEWRLSGCTLVVTL 83

Query: 81  EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140
           EPCTMCA A+  +R+ R+ YGA + K G   +          +H PE+  G+      ++
Sbjct: 84  EPCTMCAGALVQSRVDRVVYGARDDKAGAAGSLWDVVRDRRLNHRPEVIEGVLADDCARL 143

Query: 141 IQDFFKER 148
           + DFF++R
Sbjct: 144 LTDFFRDR 151


>gi|328943526|ref|ZP_08240991.1| tRNA-specific adenosine deaminase [Atopobium vaginae DSM 15829]
 gi|327491495|gb|EGF23269.1| tRNA-specific adenosine deaminase [Atopobium vaginae DSM 15829]
          Length = 237

 Score =  183 bits (465), Expect = 9e-45,   Method: Composition-based stats.
 Identities = 55/146 (37%), Positives = 77/146 (52%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
              +M CAL +AQ AAL  E+P+GAV V NN I+S A N  +   + + HAE +A+    
Sbjct: 89  DTYYMHCALAQAQKAALEQEVPIGAVVVCNNTILSAAHNLRQHSHNPSDHAEFIAMLQAA 148

Query: 64  RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123
           + L    L    +YVTLEPC MCA  +  ARI R  +GA + K G   +          +
Sbjct: 149 KKLDSWHLERCCVYVTLEPCLMCAGLMLNARIARCVFGAYDQKAGACGSLYNVSNDFRLN 208

Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149
           HS E+  G+    S  ++Q FFK +R
Sbjct: 209 HSFELKGGVLADESANLLQQFFKHKR 234


>gi|167903219|ref|ZP_02490424.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia
           pseudomallei NCTC 13177]
 gi|254179364|ref|ZP_04885963.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia
           pseudomallei 1655]
 gi|184209904|gb|EDU06947.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia
           pseudomallei 1655]
          Length = 198

 Score =  183 bits (465), Expect = 9e-45,   Method: Composition-based stats.
 Identities = 53/148 (35%), Positives = 80/148 (54%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           ++   +M  AL  A+ A    E+PVGAV V  +++I+R  N      D +AHAE+ A+R 
Sbjct: 31  ERDRRYMRLALAAAEEARAAGEVPVGAVIVRGDEVIARGFNHPIGGHDPSAHAEMAALRA 90

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
             R L    +P  +LYVTLEPC MC+ AI  ARI R+ +GA +PK G   +    +  A 
Sbjct: 91  AARALRNYRMPGCELYVTLEPCLMCSGAIMHARIGRVVFGAPDPKTGACGSVVDAFADAR 150

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H   +  G+       +++ FF +RR
Sbjct: 151 LNHHTTVEGGVLADECGAVLKSFFAQRR 178


>gi|284989070|ref|YP_003407624.1| CMP/dCMP deaminase protein [Geodermatophilus obscurus DSM 43160]
 gi|284062315|gb|ADB73253.1| CMP/dCMP deaminase zinc-binding protein [Geodermatophilus obscurus
           DSM 43160]
          Length = 154

 Score =  183 bits (465), Expect = 9e-45,   Method: Composition-based stats.
 Identities = 46/130 (35%), Positives = 71/130 (54%), Gaps = 2/130 (1%)

Query: 22  NEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQ-EILPEVDLYVT 79
            + P+GAV +  +  +++ A N   +  D TAHAE+LA+R   R+      L    L VT
Sbjct: 23  GDTPIGAVVLGPDGTVLAEAANEREKQGDPTAHAEVLALRAAARVHGDGWRLTGTTLVVT 82

Query: 80  LEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139
           LEPCTMCA A  LAR+ R+ YGA +PK G   +          +H P++  G+  + S  
Sbjct: 83  LEPCTMCAGASVLARVDRIVYGADDPKAGAAGSLWDVVRDRRLNHRPQVTGGVRAEESAT 142

Query: 140 IIQDFFKERR 149
           +++ FF+ +R
Sbjct: 143 LLRAFFRRQR 152


>gi|326470308|gb|EGD94317.1| tRNA-specific adenosine deaminase subunit Tad2p/ADAT2 [Trichophyton
           tonsurans CBS 112818]
 gi|326481147|gb|EGE05157.1| cytidine and deoxycytidylate deaminase [Trichophyton equinum CBS
           127.97]
          Length = 189

 Score =  182 bits (464), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 49/145 (33%), Positives = 75/145 (51%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           + K  VFM  AL+ A+ A    E PVG V V  +++I    N   +  + T HAE LAI 
Sbjct: 7   LSKHEVFMKMALKMAETALAVGETPVGCVLVNKDRVIGSGMNDTNKSLNGTRHAEFLAIE 66

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              R   + I  E DLYVT+EPC MCA+A+   +IR +Y+G +N + GG       ++  
Sbjct: 67  EALRSYPRSIFRETDLYVTVEPCIMCASALRQYQIRSVYFGCANERFGGTGGVLTLHSDP 126

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFF 145
                  +Y GI  + +  +++ F+
Sbjct: 127 AIDQPYPVYGGIYRKEAIMLLRKFY 151


>gi|254441373|ref|ZP_05054866.1| Cytidine and deoxycytidylate deaminase zinc-binding region domain
           protein [Octadecabacter antarcticus 307]
 gi|198251451|gb|EDY75766.1| Cytidine and deoxycytidylate deaminase zinc-binding region domain
           protein [Octadecabacter antarcticus 307]
          Length = 151

 Score =  182 bits (464), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 71/130 (54%), Positives = 89/130 (68%), Gaps = 1/130 (0%)

Query: 21  RNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVT 79
           R E+P+GAV V     +I+ AGNR REL D TAHAEILAIR  C  L QE L   D+YVT
Sbjct: 20  RGEVPIGAVIVSPTGLVIAAAGNRTRELNDPTAHAEILAIRAACAELGQERLTGHDIYVT 79

Query: 80  LEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139
           LEPC MCAAAIS AR+ RLYYGAS+PK GG+    + ++   CHH+PE+Y G+S   S  
Sbjct: 80  LEPCPMCAAAISNARLARLYYGASDPKSGGVAQAPRVFSHPQCHHAPEVYDGLSADTSET 139

Query: 140 IIQDFFKERR 149
           +++ FF  +R
Sbjct: 140 LLKSFFAAKR 149


>gi|19551479|ref|NP_599481.1| cytosine/adenosine deaminase [Corynebacterium glutamicum ATCC
           13032]
 gi|145294347|ref|YP_001137168.1| hypothetical protein cgR_0302 [Corynebacterium glutamicum R]
 gi|140844267|dbj|BAF53266.1| hypothetical protein [Corynebacterium glutamicum R]
          Length = 159

 Score =  182 bits (464), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 52/151 (34%), Positives = 75/151 (49%), Gaps = 3/151 (1%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAI 59
           +K     M  AL+ A+      ++PVGAV      +I++ A NR    +D TAHAEI+A+
Sbjct: 10  IKDDERRMRHALDIARQ-TPEGDVPVGAVIYAPTGEILATATNRREADRDPTAHAEIIAL 68

Query: 60  RMGCRILSQ-EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
           R   R  S    L +    VTLEPC+MCA A+  ARI R+ +GA  P+ G   +      
Sbjct: 69  RRAARRFSDGWRLSDCTAVVTLEPCSMCAGALVGARIGRIVFGAFEPRTGACGSVFDVVR 128

Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
                H  E+  GI E     ++ +FF+  R
Sbjct: 129 DPAVLHKVEVSGGILEPECAALMTEFFELHR 159


>gi|330933338|ref|XP_003304140.1| hypothetical protein PTT_16586 [Pyrenophora teres f. teres 0-1]
 gi|311319472|gb|EFQ87774.1| hypothetical protein PTT_16586 [Pyrenophora teres f. teres 0-1]
          Length = 293

 Score =  182 bits (464), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 45/142 (31%), Positives = 67/142 (47%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
              FM  A+  A+ A   +E PVG V V +  II R  N      + T HAE +AI    
Sbjct: 68  HEGFMREAIAMAELALKSDETPVGCVFVKDGHIIGRGMNETNRTLNGTRHAEFVAIAGIL 127

Query: 64  RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123
                 IL E DLYVT+EPC MCA+ +    IR +Y+G  N + GG       ++  +  
Sbjct: 128 SKHPISILNETDLYVTVEPCVMCASMLRQYGIRAVYFGCWNERFGGTGGVLNIHSDPSVD 187

Query: 124 HSPEIYPGISEQRSRQIIQDFF 145
               +  GI  + +  +++ F+
Sbjct: 188 KPYPVTGGIFREEAIMLLRKFY 209


>gi|256397666|ref|YP_003119230.1| CMP/dCMP deaminase zinc-binding [Catenulispora acidiphila DSM
           44928]
 gi|256363892|gb|ACU77389.1| CMP/dCMP deaminase zinc-binding [Catenulispora acidiphila DSM
           44928]
          Length = 157

 Score =  182 bits (463), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 46/141 (32%), Positives = 68/141 (48%), Gaps = 13/141 (9%)

Query: 22  NEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQ------------ 68
            ++P+GAV +     +I++  N      D T HAEI+AIR     L              
Sbjct: 15  GDVPIGAVILDPTGTVIAQGRNTREAEGDPTGHAEIVAIRSAAHTLHTKAAQTDPKAPPT 74

Query: 69  EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEI 128
             L +  L VTLEPC MCA AI L+R+ R+ +GA +PK G   +          +H+PE+
Sbjct: 75  WRLTDCTLVVTLEPCPMCAGAIVLSRLTRVVFGAWDPKAGAAGSLYDILRDPRLNHTPEV 134

Query: 129 YPGISEQRSRQIIQDFFKERR 149
            PG+ E +    +  FF+  R
Sbjct: 135 IPGVLEPQCHAALNRFFEHHR 155


>gi|271970484|ref|YP_003344680.1| CMP/dCMP deaminase zinc-binding protein [Streptosporangium roseum
           DSM 43021]
 gi|270513659|gb|ACZ91937.1| CMP/dCMP deaminase zinc-binding protein [Streptosporangium roseum
           DSM 43021]
          Length = 154

 Score =  182 bits (463), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 52/128 (40%), Positives = 73/128 (57%), Gaps = 1/128 (0%)

Query: 23  EIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81
           E+PVGAV +  +  +++RAGN    L D TAHAE+LA+R   R   +  L    L VTLE
Sbjct: 23  EVPVGAVVLGPDGSVLARAGNDRESLNDPTAHAEVLALREAARARGEWRLTGCTLVVTLE 82

Query: 82  PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141
           PCTMCA A  LAR+ R+ YGA++ KGG   +          +H PE+  G+  +    ++
Sbjct: 83  PCTMCAGASVLARVDRIVYGATDAKGGAAGSLWDVVRDRRLNHRPEVVMGVLAEECAGVL 142

Query: 142 QDFFKERR 149
            +FF  RR
Sbjct: 143 TEFFTVRR 150


>gi|239942817|ref|ZP_04694754.1| putative deaminase [Streptomyces roseosporus NRRL 15998]
 gi|291446287|ref|ZP_06585677.1| deaminase [Streptomyces roseosporus NRRL 15998]
 gi|291349234|gb|EFE76138.1| deaminase [Streptomyces roseosporus NRRL 15998]
          Length = 142

 Score =  182 bits (463), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 43/126 (34%), Positives = 66/126 (52%), Gaps = 1/126 (0%)

Query: 22  NEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80
            ++PVGAV +  +   ++   N      D TAHAEILA+R     + +  L +  L VTL
Sbjct: 15  GDVPVGAVVLGPDGTELATGHNEREATGDPTAHAEILALRRAAEAVGEWRLTDCTLVVTL 74

Query: 81  EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140
           EPCTMCA A+  +R+ R+ YGA + K G   +          +H PE+  G+ E+   + 
Sbjct: 75  EPCTMCAGALVQSRVARVVYGARDEKAGAAGSLWDVIRDRRLNHRPEVIAGVLERECAEQ 134

Query: 141 IQDFFK 146
           +  FF+
Sbjct: 135 LTAFFR 140


>gi|289208495|ref|YP_003460561.1| CMP/dCMP deaminase zinc-binding protein [Thioalkalivibrio sp.
           K90mix]
 gi|288944126|gb|ADC71825.1| CMP/dCMP deaminase zinc-binding protein [Thioalkalivibrio sp.
           K90mix]
          Length = 175

 Score =  182 bits (463), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 54/147 (36%), Positives = 78/147 (53%), Gaps = 1/147 (0%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMG 62
              +M  AL +A+ AA   E+PVGAV V      ++ A N      D TAHAEI  +R  
Sbjct: 27  HAYWMDVALAQAERAAEVGEVPVGAVLVDAEGYCLAVAHNAPIGEHDATAHAEIRVLRRA 86

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
            +  S   L    LYVTLEPC+MCA A+  AR+ RL + AS+P+ G              
Sbjct: 87  GKRCSNYRLTGTTLYVTLEPCSMCAGAMIHARVERLVFAASDPRTGAAGGAIDLLHHPAH 146

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H  E   G++ +RS +++++FF+ RR
Sbjct: 147 NHRLECIEGVAAKRSAELLRNFFRLRR 173


>gi|327292493|ref|XP_003230945.1| tRNA-specific adenosine deaminase subunit TAD2 [Trichophyton rubrum
           CBS 118892]
 gi|326466882|gb|EGD92335.1| tRNA-specific adenosine deaminase subunit TAD2 [Trichophyton rubrum
           CBS 118892]
          Length = 189

 Score =  182 bits (463), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 49/145 (33%), Positives = 75/145 (51%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           + K  VFM  AL+ A+ A    E PVG V V  +++I    N   +  + T HAE LAI 
Sbjct: 7   LSKHEVFMKMALKMAETALAVGETPVGCVLVNKDRVIGSGMNDTNKSLNGTRHAEFLAIE 66

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              R   + I  E DLYVT+EPC MCA+A+   +IR +Y+G +N + GG       ++  
Sbjct: 67  EALRSHPRSIFRETDLYVTVEPCIMCASALRQYQIRSVYFGCANERFGGTGGVLTLHSDP 126

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFF 145
                  +Y GI  + +  +++ F+
Sbjct: 127 AIDQPYPVYGGIYRKEAIMLLRKFY 151


>gi|308234244|ref|ZP_07664981.1| CMP/dCMP deaminase zinc-binding protein [Atopobium vaginae DSM
           15829]
          Length = 216

 Score =  182 bits (463), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 55/146 (37%), Positives = 77/146 (52%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
              +M CAL +AQ AAL  E+P+GAV V NN I+S A N  +   + + HAE +A+    
Sbjct: 68  DTYYMHCALAQAQKAALEQEVPIGAVVVCNNTILSAAHNLRQHSHNPSDHAEFIAMLQAA 127

Query: 64  RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123
           + L    L    +YVTLEPC MCA  +  ARI R  +GA + K G   +          +
Sbjct: 128 KKLDSWHLERCCVYVTLEPCLMCAGLMLNARIARCVFGAYDQKAGACGSLYNVSNDFRLN 187

Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149
           HS E+  G+    S  ++Q FFK +R
Sbjct: 188 HSFELKGGVLADESANLLQQFFKHKR 213


>gi|254297249|ref|ZP_04964702.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia
           pseudomallei 406e]
 gi|157807925|gb|EDO85095.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia
           pseudomallei 406e]
          Length = 198

 Score =  182 bits (463), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 53/148 (35%), Positives = 80/148 (54%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           ++   +M  AL  A+ A    E+PVGAV V  +++I+R  N      D +AHAE+ A+R 
Sbjct: 31  ERDRRYMRLALAAAEEARAAGEVPVGAVIVRGDEVIARGFNHPIGGHDPSAHAEMAALRA 90

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
             R L    +P  +LYVTLEPC MC+ AI  ARI R+ +GA +PK G   +    +  A 
Sbjct: 91  AARALRNYRMPGCELYVTLEPCLMCSGAIMHARIARVVFGAPDPKTGACGSVVDAFADAR 150

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H   +  G+       +++ FF +RR
Sbjct: 151 LNHHTTVEGGVLADECGAVLKSFFAQRR 178


>gi|126739257|ref|ZP_01754951.1| cytidine and deoxycytidylate deaminase family protein [Roseobacter
           sp. SK209-2-6]
 gi|126719874|gb|EBA16582.1| cytidine and deoxycytidylate deaminase family protein [Roseobacter
           sp. SK209-2-6]
          Length = 154

 Score =  182 bits (463), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 75/144 (52%), Positives = 105/144 (72%), Gaps = 1/144 (0%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           +M+ AL+EA+ AA R E+PVGAV +     +++RAGNR REL D TAHAEIL +R GC+ 
Sbjct: 11  YMNLALDEARAAARRGEVPVGAVLINSKGDVVARAGNRTRELNDPTAHAEILVLREGCKA 70

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           +  E L   DLYVTLEPC MCAAA++ ARI R+YYGAS+PK GG+ +G   ++    HH 
Sbjct: 71  IGSERLMGYDLYVTLEPCAMCAAALAAARISRIYYGASDPKSGGVAHGACVFSHPQAHHV 130

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
           PE+Y GISE+ + ++++ FF+++R
Sbjct: 131 PEVYEGISEREAAELLKVFFEQKR 154


>gi|254198049|ref|ZP_04904471.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia
           pseudomallei S13]
 gi|169654790|gb|EDS87483.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia
           pseudomallei S13]
          Length = 198

 Score =  182 bits (463), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 53/148 (35%), Positives = 80/148 (54%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           ++   +M  AL  A+ A    E+PVGAV V  +++I+R  N      D +AHAE+ A+R 
Sbjct: 31  ERDRRYMRLALAAAEEARAAGEVPVGAVIVRGDEVIARGFNHPIGGHDPSAHAEMAALRA 90

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
             R L    +P  +LYVTLEPC MC+ AI  ARI R+ +GA +PK G   +    +  A 
Sbjct: 91  AARALRNYRMPGCELYVTLEPCLMCSGAIMHARIARVVFGAPDPKTGACGSVVDAFADAR 150

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H   +  G+       +++ FF +RR
Sbjct: 151 LNHHTTVEGGVLADECGAVLKSFFAQRR 178


>gi|149185197|ref|ZP_01863514.1| CMP/dCMP deaminase, zinc-binding protein [Erythrobacter sp. SD-21]
 gi|148831308|gb|EDL49742.1| CMP/dCMP deaminase, zinc-binding protein [Erythrobacter sp. SD-21]
          Length = 142

 Score =  182 bits (463), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 65/128 (50%), Positives = 87/128 (67%)

Query: 22  NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81
            E+PVGAV   +  II+ A N  RE  D TAHAEILAIR     L QE L   +L+VTLE
Sbjct: 15  GEVPVGAVITRDGAIIAEAHNTPRETCDPTAHAEILAIRRAAEALGQERLTTCELWVTLE 74

Query: 82  PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141
           PC MCA AI  AR+ ++YYGAS+PKGG +E+G + +    C H PE+Y G+ E+R+ +++
Sbjct: 75  PCAMCAGAIVHARLAKVYYGASDPKGGAVEHGARVFEQEQCLHKPEVYAGLGEERAAEML 134

Query: 142 QDFFKERR 149
           +DFF+ RR
Sbjct: 135 RDFFRGRR 142


>gi|225681358|gb|EEH19642.1| tRNA-specific adenosine deaminase subunit TAD2 [Paracoccidioides
           brasiliensis Pb03]
          Length = 197

 Score =  182 bits (463), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 48/145 (33%), Positives = 73/145 (50%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
           K   FM  AL+  + A    E PVG V V N +II    N   +  + T HAE LA+   
Sbjct: 16  KHEYFMRKALDMGEEALASGETPVGCVLVHNEEIIGSGMNDTNKSMNGTRHAEFLAVEEV 75

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
            R   + I  E DLYVT+EPC MCA+A+   RIR +Y+G +N + GG       ++    
Sbjct: 76  LRSHPRSIFHETDLYVTVEPCIMCASALRQYRIRHVYFGCANERFGGTGGVLNLHSDPGI 135

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKE 147
               E+  G+  + +  +++ F+ +
Sbjct: 136 DPPYELTGGLFRKEAIMLLRRFYIQ 160


>gi|168184980|ref|ZP_02619644.1| cytidine/deoxycytidylate deaminase family protein [Clostridium
           botulinum Bf]
 gi|237793341|ref|YP_002860893.1| cytidine/deoxycytidylate deaminase family protein [Clostridium
           botulinum Ba4 str. 657]
 gi|182671972|gb|EDT83933.1| cytidine/deoxycytidylate deaminase family protein [Clostridium
           botulinum Bf]
 gi|229261589|gb|ACQ52622.1| cytidine/deoxycytidylate deaminase family protein [Clostridium
           botulinum Ba4 str. 657]
          Length = 148

 Score =  182 bits (463), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 56/145 (38%), Positives = 79/145 (54%), Gaps = 1/145 (0%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           N ++  A+ EA+ A    E+PVGA+ V  NKII+++ N    LKD TAHAEILAI+  C 
Sbjct: 2   NDYIEYAIIEAKKALAIGEVPVGAIIVKENKIIAKSHNLKESLKDPTAHAEILAIKEACN 61

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
            +    L    +YVTLEPC MCA+AI  +RI  L+ G  +P GG   +       +    
Sbjct: 62  TIHNWRLKGCKMYVTLEPCAMCASAIIQSRISELHIGTFDPVGGACGSVVNITNNSYLKS 121

Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149
           +  I   + +    +II +FFK  R
Sbjct: 122 NLSIKW-LYDDECSKIITNFFKNIR 145


>gi|167824713|ref|ZP_02456184.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia
           pseudomallei 9]
 gi|226200116|ref|ZP_03795662.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia
           pseudomallei Pakistan 9]
 gi|225927800|gb|EEH23841.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia
           pseudomallei Pakistan 9]
          Length = 198

 Score =  182 bits (462), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 53/148 (35%), Positives = 80/148 (54%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           ++   +M  AL  A+ A    E+PVGAV V  +++I+R  N      D +AHAE+ A+R 
Sbjct: 31  ERDRRYMRLALAAAEEARAAGEVPVGAVIVRGDEVIARGFNHPIGGHDPSAHAEMAALRA 90

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
             R L    +P  +LYVTLEPC MC+ AI  ARI R+ +GA +PK G   +    +  A 
Sbjct: 91  AARALRNYRMPGCELYVTLEPCLMCSGAIMHARIARVVFGAPDPKTGACGSVVDAFADAR 150

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H   +  G+       +++ FF +RR
Sbjct: 151 LNHHTTVEGGVLADECGAVLKSFFAQRR 178


>gi|167919469|ref|ZP_02506560.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia
           pseudomallei BCC215]
          Length = 198

 Score =  182 bits (462), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 53/148 (35%), Positives = 80/148 (54%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           ++   +M  AL  A+ A    E+PVGAV V  +++I+R  N      D +AHAE+ A+R 
Sbjct: 31  ERDRRYMRLALAAAEEARAAGEVPVGAVIVRGDEVIARGFNHPIGGHDPSAHAEMAALRA 90

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
             R L    +P  +LYVTLEPC MC+ AI  ARI R+ +GA +PK G   +    +  A 
Sbjct: 91  AARALRNYRMPGCELYVTLEPCLMCSGAIMHARIARVVFGAPDPKTGACGSVVDAFADAR 150

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H   +  G+       +++ FF +RR
Sbjct: 151 LNHHTTVEGGVLADECGAVLKSFFAQRR 178


>gi|76811739|ref|YP_333930.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia
           pseudomallei 1710b]
 gi|121599544|ref|YP_993329.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia
           mallei SAVP1]
 gi|124383998|ref|YP_001029233.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia
           mallei NCTC 10229]
 gi|126450143|ref|YP_001080836.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia
           mallei NCTC 10247]
 gi|167000596|ref|ZP_02266407.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia
           mallei PRL-20]
 gi|238562434|ref|ZP_04610071.1| tRNA-specific adenosine deaminase [Burkholderia mallei GB8 horse 4]
 gi|254177488|ref|ZP_04884143.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia
           mallei ATCC 10399]
 gi|254189248|ref|ZP_04895759.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia
           pseudomallei Pasteur 52237]
 gi|254200108|ref|ZP_04906474.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia
           mallei FMH]
 gi|254206447|ref|ZP_04912799.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia
           mallei JHU]
 gi|254259652|ref|ZP_04950706.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia
           pseudomallei 1710a]
 gi|254358144|ref|ZP_04974417.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia
           mallei 2002721280]
 gi|76581192|gb|ABA50667.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia
           pseudomallei 1710b]
 gi|121228354|gb|ABM50872.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia
           mallei SAVP1]
 gi|124292018|gb|ABN01287.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia
           mallei NCTC 10229]
 gi|126243013|gb|ABO06106.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia
           mallei NCTC 10247]
 gi|147749704|gb|EDK56778.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia
           mallei FMH]
 gi|147753890|gb|EDK60955.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia
           mallei JHU]
 gi|148027271|gb|EDK85292.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia
           mallei 2002721280]
 gi|157936927|gb|EDO92597.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia
           pseudomallei Pasteur 52237]
 gi|160698527|gb|EDP88497.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia
           mallei ATCC 10399]
 gi|238522629|gb|EEP86072.1| tRNA-specific adenosine deaminase [Burkholderia mallei GB8 horse 4]
 gi|243063523|gb|EES45709.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia
           mallei PRL-20]
 gi|254218341|gb|EET07725.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia
           pseudomallei 1710a]
          Length = 198

 Score =  182 bits (462), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 53/148 (35%), Positives = 80/148 (54%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           ++   +M  AL  A+ A    E+PVGAV V  +++I+R  N      D +AHAE+ A+R 
Sbjct: 31  ERDRRYMRLALAAAEEARAAGEVPVGAVIVRGDEVIARGFNHPIGGHDPSAHAEMAALRA 90

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
             R L    +P  +LYVTLEPC MC+ AI  ARI R+ +GA +PK G   +    +  A 
Sbjct: 91  AARALRNYRMPGCELYVTLEPCLMCSGAIMHARIARVVFGAPDPKTGACGSVVDAFADAR 150

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H   +  G+       +++ FF +RR
Sbjct: 151 LNHHTTVEGGVLADECGAVLKSFFAQRR 178


>gi|315040523|ref|XP_003169639.1| tRNA-specific adenosine deaminase subunit TAD2 [Arthroderma gypseum
           CBS 118893]
 gi|311346329|gb|EFR05532.1| tRNA-specific adenosine deaminase subunit TAD2 [Arthroderma gypseum
           CBS 118893]
          Length = 189

 Score =  182 bits (462), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 51/145 (35%), Positives = 75/145 (51%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           + K  VFM  AL  A+ A    E PVG V V  +K+I    N   +  + T HAE LAI 
Sbjct: 7   LSKHEVFMKMALRMAETALAVGETPVGCVLVNKDKVIGSGMNDTNKSLNGTRHAEFLAIE 66

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              R   + IL E DLYVT+EPC MCA+A+   R+R +Y+G +N + GG       ++  
Sbjct: 67  EALRSHPRSILHETDLYVTVEPCIMCASALRQYRVRSVYFGCANERFGGTGGVLSLHSDP 126

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFF 145
                  +Y GI  + +  +++ F+
Sbjct: 127 AIELPYPVYGGIFRKEAIMLLRKFY 151


>gi|148555238|ref|YP_001262820.1| tRNA-adenosine deaminase [Sphingomonas wittichii RW1]
 gi|148500428|gb|ABQ68682.1| tRNA-adenosine deaminase [Sphingomonas wittichii RW1]
          Length = 150

 Score =  182 bits (462), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 67/128 (52%), Positives = 85/128 (66%)

Query: 22  NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81
            E+PVGAV V  +++++ A N      D TAHAEI AIR     L  + L + DLYVTLE
Sbjct: 23  GEVPVGAVIVRGDEVVAAAANAMCGGTDPTAHAEIEAIRAASARLGAQRLDDCDLYVTLE 82

Query: 82  PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141
           PC MCA AI+ AR+RRLYYGA +PKGG + NG +F+T  TCHH PE Y GI E  +  ++
Sbjct: 83  PCAMCAGAIAHARLRRLYYGADDPKGGAVANGPRFFTQPTCHHRPETYGGIGEGEAAALL 142

Query: 142 QDFFKERR 149
           +DFF  RR
Sbjct: 143 RDFFAARR 150


>gi|126441141|ref|YP_001059426.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia
           pseudomallei 668]
 gi|126454685|ref|YP_001066697.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia
           pseudomallei 1106a]
 gi|134277676|ref|ZP_01764391.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia
           pseudomallei 305]
 gi|167739120|ref|ZP_02411894.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia
           pseudomallei 14]
 gi|217421765|ref|ZP_03453269.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia
           pseudomallei 576]
 gi|237812753|ref|YP_002897204.1| tRNA-specific adenosine deaminase [Burkholderia pseudomallei
           MSHR346]
 gi|242317933|ref|ZP_04816949.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia
           pseudomallei 1106b]
 gi|126220634|gb|ABN84140.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia
           pseudomallei 668]
 gi|126228327|gb|ABN91867.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia
           pseudomallei 1106a]
 gi|134251326|gb|EBA51405.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia
           pseudomallei 305]
 gi|217395507|gb|EEC35525.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia
           pseudomallei 576]
 gi|237506312|gb|ACQ98630.1| tRNA-specific adenosine deaminase [Burkholderia pseudomallei
           MSHR346]
 gi|242141172|gb|EES27574.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia
           pseudomallei 1106b]
          Length = 198

 Score =  182 bits (462), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 53/148 (35%), Positives = 80/148 (54%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           ++   +M  AL  A+ A    E+PVGAV V  +++I+R  N      D +AHAE+ A+R 
Sbjct: 31  ERDRRYMRLALAAAEEARAAGEVPVGAVIVRGDEVIARGFNHPIGGHDPSAHAEMAALRA 90

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
             R L    +P  +LYVTLEPC MC+ AI  ARI R+ +GA +PK G   +    +  A 
Sbjct: 91  AARALRNYRMPGCELYVTLEPCLMCSGAIMHARIARVVFGAPDPKTGACGSVVDAFADAR 150

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H   +  G+       +++ FF +RR
Sbjct: 151 LNHHTTVEGGVLADECGAVLKSFFAQRR 178


>gi|307700388|ref|ZP_07637427.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Mobiluncus mulieris FB024-16]
 gi|307614373|gb|EFN93603.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Mobiluncus mulieris FB024-16]
          Length = 174

 Score =  182 bits (462), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 55/144 (38%), Positives = 77/144 (53%), Gaps = 2/144 (1%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKII-SRAGNRNR-ELKDVTAHAEILAIRMGCRI 65
           +  A + A  AA+  ++PVGAV +    I+     N+      D TAHAEI+A+R     
Sbjct: 14  LDTAFDLAARAAVSGDVPVGAVLLTAQGIVTGLGLNQREIPPHDPTAHAEIVAMREAAGR 73

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           L    L    L VTLEPCTMCA AI  ARI RL +GA + K G   +       +  +H 
Sbjct: 74  LRTWNLAGCTLVVTLEPCTMCAGAIVTARISRLIFGAWDSKAGACGSIRDVVRDSRLNHQ 133

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
            E+  G++E+R   ++QDFF +RR
Sbjct: 134 VEVIGGVAEKRGVALLQDFFGKRR 157


>gi|308176278|ref|YP_003915684.1| cytosine deaminase [Arthrobacter arilaitensis Re117]
 gi|307743741|emb|CBT74713.1| putative cytosine deaminase [Arthrobacter arilaitensis Re117]
          Length = 158

 Score =  182 bits (462), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 49/154 (31%), Positives = 81/154 (52%), Gaps = 7/154 (4%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRM 61
           +   +M  AL EA+ A   +++P+GAV +    ++++   N      D TAHAE++AIR 
Sbjct: 4   EFETWMDLALAEARAALATDDVPIGAVILSPAGEVLATGRNEREAGNDPTAHAEVVAIRN 63

Query: 62  GCRIL------SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
             + L          L +  L VTLEPC MCA AI L+RI +L +GA + K G   +   
Sbjct: 64  AVKALEAKGEDDGWRLSDCTLVVTLEPCAMCAGAIVLSRIPKLVFGAWDEKAGACGSVFD 123

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
                  +H  E+Y  + E+   +++++FF+ +R
Sbjct: 124 IVREPRLNHWVEVYSRVKEEECAELLREFFRGKR 157


>gi|148653387|ref|YP_001280480.1| CMP/dCMP deaminase, zinc-binding [Psychrobacter sp. PRwf-1]
 gi|148572471|gb|ABQ94530.1| CMP/dCMP deaminase, zinc-binding [Psychrobacter sp. PRwf-1]
          Length = 190

 Score =  182 bits (462), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 58/144 (40%), Positives = 82/144 (56%), Gaps = 1/144 (0%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  AL  AQ  A + E+PVGAV V +NKII    N+     D TAHAE++A+R  C+ L
Sbjct: 37  FMRRALALAQQGASQEEVPVGAVLVCDNKIIGEGFNQPITTSDPTAHAEVVALRCACQTL 96

Query: 67  SQEIL-PEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
               L P   LYVTLEPCTMC  A+  AR+ RL +    P+ G + +      +   +H 
Sbjct: 97  QNYRLPPNTTLYVTLEPCTMCLGALIHARLARLVFATFEPRAGMVGSQLNLTEMDFYNHK 156

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
            + Y G+ +Q+S+  ++ FF+ RR
Sbjct: 157 MQAYSGLLQQQSQTQLRSFFRARR 180


>gi|295671881|ref|XP_002796487.1| tRNA-specific adenosine deaminase [Paracoccidioides brasiliensis
           Pb01]
 gi|226283467|gb|EEH39033.1| tRNA-specific adenosine deaminase [Paracoccidioides brasiliensis
           Pb01]
          Length = 197

 Score =  182 bits (462), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 47/145 (32%), Positives = 73/145 (50%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
           K   FM  AL+  + A    E PVG V V N +II    N   +  + T HAE LA+   
Sbjct: 16  KHEYFMRKALDMGEEALASGETPVGCVLVHNEEIIGSGMNDTNKSMNGTRHAEFLAVEEV 75

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
            R   + I  E DLYVT+EPC MCA+A+   RIR +++G +N + GG       ++    
Sbjct: 76  LRSYPRSIFHETDLYVTVEPCIMCASALRQYRIRHVFFGCANERFGGTGGVLNLHSDPGI 135

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKE 147
               E+  G+  + +  +++ F+ +
Sbjct: 136 DPPYELTGGLFRKEAIMLLRRFYIQ 160


>gi|332284214|ref|YP_004416125.1| putative zinc-binding hydrolase [Pusillimonas sp. T7-7]
 gi|330428167|gb|AEC19501.1| putative zinc-binding hydrolase [Pusillimonas sp. T7-7]
          Length = 152

 Score =  182 bits (462), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 48/132 (36%), Positives = 68/132 (51%), Gaps = 1/132 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  ALE+A+ A    E+PVGAV +    ++I    NR     D T HAEI+A+R     +
Sbjct: 1   MRLALEQAELAYAAGEVPVGAVVLDAQGQLIGAGSNRTIGAHDPTGHAEIVALRAAAAHV 60

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               LP   LYVTLEPC MC  A+  AR+ R+ YGA +PK G   +    +T+   +H  
Sbjct: 61  RNYRLPGASLYVTLEPCAMCMGAMLHARLARVVYGAVDPKTGACGSVLSVHTVPQLNHQT 120

Query: 127 EIYPGISEQRSR 138
            +  G+  +   
Sbjct: 121 AVEGGVLAEECG 132


>gi|261880583|ref|ZP_06007010.1| tRNA-specific adenosine deaminase [Prevotella bergensis DSM 17361]
 gi|270332702|gb|EFA43488.1| tRNA-specific adenosine deaminase [Prevotella bergensis DSM 17361]
          Length = 151

 Score =  182 bits (462), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 56/148 (37%), Positives = 83/148 (56%), Gaps = 5/148 (3%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           +K   +M  A++EA+ A    EIP+GA+ V  ++IISRA N+   L DVTAHAE+LAI  
Sbjct: 9   QKDERYMRMAIQEAEAAFEEGEIPIGAIVVCRDRIISRAHNQTETLNDVTAHAEMLAITA 68

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
               +  + LP+  LYVT+EPC MCA AI  ++I R+ YG    K G      + Y    
Sbjct: 69  AANTMGGKYLPDCTLYVTVEPCVMCAGAIGWSQIGRIVYGVGEEKRG-----YKRYAPDA 123

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            H    +  G+ ++  + ++  FFK +R
Sbjct: 124 LHPKTTVTSGVLQEECKALMISFFKNKR 151


>gi|258405729|ref|YP_003198471.1| CMP/dCMP deaminase zinc-binding [Desulfohalobium retbaense DSM
           5692]
 gi|257797956|gb|ACV68893.1| CMP/dCMP deaminase zinc-binding protein [Desulfohalobium retbaense
           DSM 5692]
          Length = 165

 Score =  182 bits (462), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 56/144 (38%), Positives = 81/144 (56%), Gaps = 2/144 (1%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNK-IISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  AL+EA+ A    E+P+GAV V  +K +++R GNR     D TAHAEI+A+R  C+ +
Sbjct: 19  MELALDEARAAQTHGEVPIGAVLVDPDKRVLARGGNRTITDSDPTAHAEIVALRRACQSV 78

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               LP   L VTLEPC MC  A+  AR+  + + A +PK G I +  +   L   +H  
Sbjct: 79  GNYRLPGAILAVTLEPCLMCLGALIQARLAGVVFAARDPKAGAIVSQLEGPHLPWLNHRF 138

Query: 127 EIYPGI-SEQRSRQIIQDFFKERR 149
            +         SR ++QDFF++RR
Sbjct: 139 WVRETTAHAATSRALLQDFFRQRR 162


>gi|227876439|ref|ZP_03994551.1| nucleoside deaminase [Mobiluncus mulieris ATCC 35243]
 gi|227842980|gb|EEJ53177.1| nucleoside deaminase [Mobiluncus mulieris ATCC 35243]
          Length = 174

 Score =  182 bits (462), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 55/144 (38%), Positives = 78/144 (54%), Gaps = 2/144 (1%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISR-AGNRNR-ELKDVTAHAEILAIRMGCRI 65
           +  A + A  AA+  ++PVGAV +    I++    N+      D TAHAEI+A+R     
Sbjct: 14  LDTAFDLAARAAVSGDVPVGAVLLTAQGIVAGLGLNQREIPPHDPTAHAEIVAMREAAGR 73

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           L    L    L VTLEPCTMCA AI  ARI RL +GA + K G   +       +  +H 
Sbjct: 74  LRTWNLAGCTLVVTLEPCTMCAGAIVTARISRLIFGAWDSKAGACGSIRDVVRDSRLNHQ 133

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
            E+  G++E+R   ++QDFF +RR
Sbjct: 134 VEVIGGVAEKRGVALLQDFFGKRR 157


>gi|168010085|ref|XP_001757735.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162691011|gb|EDQ77375.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 413

 Score =  181 bits (461), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 60/162 (37%), Positives = 79/162 (48%), Gaps = 14/162 (8%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           ++   FM  AL+EA+ AA   E+PVGAV V  NKII+R  N      D TAHAE+L IR 
Sbjct: 209 EEDLGFMQEALKEAKKAAKLGEVPVGAVLVHKNKIIARFHNEVETTGDPTAHAEMLCIRC 268

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFY---- 117
               L    L +V LYVTLEPC MCA AI   R+  + +GA N   G   +  + +    
Sbjct: 269 AAAQLGGWRLTDVTLYVTLEPCPMCAGAILQGRVSEVVWGARNSLLGADGSWIKLFPVSS 328

Query: 118 ----------TLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
                      L   H +  +  G+  +    I+Q FF  RR
Sbjct: 329 SGEQEPKCKDYLHPFHRTITVRRGVLGEECGDIMQTFFAMRR 370


>gi|303245260|ref|ZP_07331544.1| CMP/dCMP deaminase zinc-binding [Desulfovibrio fructosovorans JJ]
 gi|302493109|gb|EFL52971.1| CMP/dCMP deaminase zinc-binding [Desulfovibrio fructosovorans JJ]
          Length = 152

 Score =  181 bits (461), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 57/143 (39%), Positives = 81/143 (56%), Gaps = 1/143 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M+ ALE+A+ AA + E PVGAV +    +++  AGN      D TAHAEILA+R     +
Sbjct: 1   MALALEKARGAAAQGEAPVGAVVLSAAGELLGAAGNAPITRHDPTAHAEILALRQAAAHV 60

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               LP   + VTLEPC MC  A+  AR+  L YGAS+P+ G I +      L   +H  
Sbjct: 61  GNYRLPGSIMAVTLEPCVMCLGAMIHARVGLLVYGASDPRTGAIASMLPGPDLPFFNHRF 120

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           ++  G+ E     +++DFF+ERR
Sbjct: 121 DVLSGVLEATCGGLLRDFFRERR 143


>gi|229817012|ref|ZP_04447294.1| hypothetical protein BIFANG_02267 [Bifidobacterium angulatum DSM
           20098]
 gi|229785757|gb|EEP21871.1| hypothetical protein BIFANG_02267 [Bifidobacterium angulatum DSM
           20098]
          Length = 147

 Score =  181 bits (461), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 51/150 (34%), Positives = 67/150 (44%), Gaps = 4/150 (2%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGA-VAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
           M      M CALE A  AA   ++PVGA V   +  I     N      D  AHAE+ A+
Sbjct: 1   MNDDKA-MRCALELAHRAAEHGDVPVGALVLDAHGHIAGEGWNTREVDGDPLAHAEVAAM 59

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
           R          L +  L VTLEPC MCA A     I R+ +GA + K G   +       
Sbjct: 60  REAAEH--GWNLADCTLVVTLEPCPMCAGACIQTHIGRIVFGAWDAKLGACGSVWDIPRD 117

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
                 PE+Y G+ E+   Q++ +FF  RR
Sbjct: 118 PHVGSVPEVYGGVMERECAQVLSEFFAARR 147


>gi|238021048|ref|ZP_04601474.1| hypothetical protein GCWU000324_00945 [Kingella oralis ATCC 51147]
 gi|237868028|gb|EEP69034.1| hypothetical protein GCWU000324_00945 [Kingella oralis ATCC 51147]
          Length = 238

 Score =  181 bits (461), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 51/145 (35%), Positives = 79/145 (54%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
             +M  AL +A  AA   E+PVGAV V   +II++A NR      ++ HAEI A+    +
Sbjct: 94  ERWMRAALFQAAEAAKLGEVPVGAVVVHRGEIIAQAHNRCVADCSISHHAEIQALAAAGQ 153

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
           +L    L E D+YV+LEPC MCA+A+  AR+ R+ + A  PK G   +    ++    + 
Sbjct: 154 VLGNYRLNECDVYVSLEPCAMCASAMIQARVARVVFAAHEPKTGAAGSVLNLFSNNQLNQ 213

Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149
              +  G+    ++Q +Q FF+ RR
Sbjct: 214 HTAMLGGLLADEAKQQLQAFFRLRR 238


>gi|148378037|ref|YP_001252578.1| cytidine/deoxycytidylate deaminase family protein [Clostridium
           botulinum A str. ATCC 3502]
 gi|153931005|ref|YP_001382436.1| cytidine/deoxycytidylate deaminase family protein [Clostridium
           botulinum A str. ATCC 19397]
 gi|153937691|ref|YP_001385989.1| cytidine/deoxycytidylate deaminase family protein [Clostridium
           botulinum A str. Hall]
 gi|153941479|ref|YP_001389392.1| cytidine/deoxycytidylate deaminase family protein [Clostridium
           botulinum F str. Langeland]
 gi|168181142|ref|ZP_02615806.1| cytidine/deoxycytidylate deaminase family protein [Clostridium
           botulinum NCTC 2916]
 gi|226947243|ref|YP_002802334.1| cytidine/deoxycytidylate deaminase family protein [Clostridium
           botulinum A2 str. Kyoto]
 gi|148287521|emb|CAL81583.1| putative cytosine deaminase [Clostridium botulinum A str. ATCC
           3502]
 gi|152927049|gb|ABS32549.1| cytidine/deoxycytidylate deaminase family protein [Clostridium
           botulinum A str. ATCC 19397]
 gi|152933605|gb|ABS39104.1| cytidine/deoxycytidylate deaminase family protein [Clostridium
           botulinum A str. Hall]
 gi|152937375|gb|ABS42873.1| cytidine/deoxycytidylate deaminase family protein [Clostridium
           botulinum F str. Langeland]
 gi|182668031|gb|EDT80010.1| cytidine/deoxycytidylate deaminase family protein [Clostridium
           botulinum NCTC 2916]
 gi|226841341|gb|ACO84007.1| cytidine/deoxycytidylate deaminase family protein [Clostridium
           botulinum A2 str. Kyoto]
 gi|295317500|gb|ADF97877.1| cytidine/deoxycytidylate deaminase family protein [Clostridium
           botulinum F str. 230613]
 gi|322804299|emb|CBZ01849.1| tRNA-specific adenosine-34 deaminase [Clostridium botulinum H04402
           065]
          Length = 145

 Score =  181 bits (461), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 56/145 (38%), Positives = 80/145 (55%), Gaps = 1/145 (0%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           N ++  A+ EA+ A    E+PVGA+ V  NKII+++ N    LKD TAHAEILAI+  C 
Sbjct: 2   NDYIEYAIIEAKKALAIGEVPVGAIIVKENKIIAKSHNLKESLKDPTAHAEILAIKEACN 61

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
            +    L    +YVTLEPC MCA+AI  +RI  L+ G  +P GG   +       +   +
Sbjct: 62  TIHNWRLKGCKMYVTLEPCAMCASAIIQSRISELHIGTFDPVGGACGSVVNITNNSYLKN 121

Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149
           +  I   + +    +II +FFK  R
Sbjct: 122 NLNIKW-LYDDECSRIITNFFKNIR 145


>gi|269976007|ref|ZP_06183011.1| tRNA-specific adenosine deaminase [Mobiluncus mulieris 28-1]
 gi|306817398|ref|ZP_07451143.1| tRNA-specific adenosine deaminase [Mobiluncus mulieris ATCC 35239]
 gi|269935835|gb|EEZ92365.1| tRNA-specific adenosine deaminase [Mobiluncus mulieris 28-1]
 gi|304649839|gb|EFM47119.1| tRNA-specific adenosine deaminase [Mobiluncus mulieris ATCC 35239]
          Length = 174

 Score =  181 bits (461), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 55/144 (38%), Positives = 78/144 (54%), Gaps = 2/144 (1%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISR-AGNRNR-ELKDVTAHAEILAIRMGCRI 65
           +  A + A  AA+  ++PVGAV +    I++    N+      D TAHAEI+A+R     
Sbjct: 14  LDTAFDLAARAAVSGDVPVGAVLLTAQGIVAGLGLNQREIPPHDPTAHAEIVAMREAAGR 73

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           L    L    L VTLEPCTMCA AI  ARI RL +GA + K G   +       +  +H 
Sbjct: 74  LRTWNLAGCTLVVTLEPCTMCAGAIVTARISRLIFGAWDSKAGACGSIRDVVRDSRLNHQ 133

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
            E+  G++E+R   ++QDFF +RR
Sbjct: 134 VEVIGGVAEKRGVALLQDFFGKRR 157


>gi|167911457|ref|ZP_02498548.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia
           pseudomallei 112]
          Length = 185

 Score =  181 bits (461), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 53/148 (35%), Positives = 80/148 (54%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           ++   +M  AL  A+ A    E+PVGAV V  +++I+R  N      D +AHAE+ A+R 
Sbjct: 31  ERDRRYMRLALAAAEEARAAGEVPVGAVIVRGDEVIARGFNHPIGGHDPSAHAEMAALRA 90

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
             R L    +P  +LYVTLEPC MC+ AI  ARI R+ +GA +PK G   +    +  A 
Sbjct: 91  AARALRNYRMPGCELYVTLEPCLMCSGAIMHARIARVVFGAPDPKTGACGSVVDAFADAR 150

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H   +  G+       +++ FF +RR
Sbjct: 151 LNHHTTVEGGVLADECGAVLKSFFAQRR 178


>gi|307579329|gb|ADN63298.1| CMP/dCMP deaminase zinc-binding protein [Xylella fastidiosa subsp.
           fastidiosa GB514]
          Length = 151

 Score =  181 bits (461), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 52/144 (36%), Positives = 74/144 (51%), Gaps = 2/144 (1%)

Query: 8   MSCALEEAQNAALR-NEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M  AL  A  AA   +EIPVGAV +     ++    N N    D +AHAEI+A+R     
Sbjct: 1   MRHALTLAHRAATEFDEIPVGAVLISPEGTLLGEGCNYNITSHDPSAHAEIMALRAAGHQ 60

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           L    +P   LYVTLEPC MCA AI  ARI  L Y A++PK G   +          +H 
Sbjct: 61  LRNHRMPGCTLYVTLEPCLMCAMAIIHARIAHLIYAAADPKTGACGSTFDILNDPRHNHH 120

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
             +Y G+  + + + + ++F+ +R
Sbjct: 121 VHVYGGLLAEEASRRLTNYFRTKR 144


>gi|324998977|ref|ZP_08120089.1| cytidine/deoxycytidylate deaminase [Pseudonocardia sp. P1]
          Length = 157

 Score =  181 bits (461), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 52/143 (36%), Positives = 78/143 (54%), Gaps = 1/143 (0%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMG 62
            +  +  ALE A+ AA  +++P+GAV +  +   ++ A N    L D TAHAE+LA+R  
Sbjct: 6   DDRALGRALEVARGAAASDDVPIGAVVLDADGTELAAACNAREALGDPTAHAEVLALRAA 65

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
            R++    L    L VT+EPCTMCA AI LAR+ R+ +GA  PK G   +          
Sbjct: 66  ARVVGSWRLTGTTLAVTVEPCTMCAGAIGLARVERVVFGAWEPKTGAAGSLWDVLRDRRL 125

Query: 123 HHSPEIYPGISEQRSRQIIQDFF 145
            H PE+  G+    +  ++Q+FF
Sbjct: 126 SHRPEVVGGVRAGEAAALLQEFF 148


>gi|312219914|emb|CBX99856.1| hypothetical protein [Leptosphaeria maculans]
          Length = 259

 Score =  181 bits (461), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 44/142 (30%), Positives = 67/142 (47%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
              FM  A+  A+ A   +E PVG V V + +II R  N      + T HAE +AI    
Sbjct: 59  HEGFMREAIAMAELALKSDETPVGCVFVKDGEIIGRGMNETNRTLNGTRHAEFVAIASIL 118

Query: 64  RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123
                 IL E DLYVT+EPC MCA+ +    I+ +Y+G  N + GG       +   +  
Sbjct: 119 SKHPISILNETDLYVTVEPCVMCASMLRQYGIKAVYFGCWNERFGGTGGVLNVHCDPSVD 178

Query: 124 HSPEIYPGISEQRSRQIIQDFF 145
               +  GI  + +  +++ F+
Sbjct: 179 KPYPVTGGIFREEAIMLLRKFY 200


>gi|84686242|ref|ZP_01014137.1| cytidine and deoxycytidylate deaminase family protein
           [Maritimibacter alkaliphilus HTCC2654]
 gi|84665769|gb|EAQ12244.1| cytidine and deoxycytidylate deaminase family protein
           [Rhodobacterales bacterium HTCC2654]
          Length = 150

 Score =  181 bits (461), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 70/130 (53%), Positives = 91/130 (70%), Gaps = 1/130 (0%)

Query: 21  RNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVT 79
           R E+PVGAV V  +  I+++AGNR REL D TAHAE L IR  C     E LP+ DLYVT
Sbjct: 21  RGEVPVGAVLVGPDGTIVAQAGNRTRELSDPTAHAETLVIRAACAAAGSERLPDHDLYVT 80

Query: 80  LEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139
           LEPC MCAA IS ARIRRLYYGAS+PK GG  +G + ++   CHH+P++Y GI+   +  
Sbjct: 81  LEPCPMCAAVISFARIRRLYYGASDPKSGGTAHGARVFSHPQCHHAPDVYDGIAAAEAET 140

Query: 140 IIQDFFKERR 149
           +++ FF ++R
Sbjct: 141 LLKTFFGKKR 150


>gi|300933920|ref|ZP_07149176.1| putative cytosine/adenosine deaminase [Corynebacterium resistens
           DSM 45100]
          Length = 173

 Score =  181 bits (460), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 50/149 (33%), Positives = 74/149 (49%), Gaps = 4/149 (2%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           +   +M  ALE A  A  R ++PVGAV    + + ++   N+  +  D   HAEI AIR 
Sbjct: 27  QHEAWMRRALEVA-GATPRGDVPVGAVVYGPDGRELAVGFNQREKDSDPLGHAEIAAIRA 85

Query: 62  GCRILSQ-EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
               L     L +  L VTLEPC MCA A   AR++R+ YGA  PK G   +       A
Sbjct: 86  AVAELGDAWRLEDCTLVVTLEPCAMCAGAALGARVKRIVYGAREPKTGACGSVWDLPREA 145

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
              H  E++ G+       ++++FF++ R
Sbjct: 146 PL-HKAEVFGGVLRDECEALVKEFFEQLR 173


>gi|291303426|ref|YP_003514704.1| CMP/dCMP deaminase zinc-binding protein [Stackebrandtia nassauensis
           DSM 44728]
 gi|290572646|gb|ADD45611.1| CMP/dCMP deaminase zinc-binding protein [Stackebrandtia nassauensis
           DSM 44728]
          Length = 144

 Score =  181 bits (460), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 47/140 (33%), Positives = 72/140 (51%), Gaps = 4/140 (2%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKI-ISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  AL  A  +    ++P+GAV    + I ++ A N      D TAHAE++A+R    + 
Sbjct: 1   MRRALAVAAESGS--DVPIGAVVYSPDGIELAAAHNLREATGDPTAHAELVALRRAAEVH 58

Query: 67  SQ-EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
                L +  L VT+EPCTMCA AI+L+RI  + +GA  PK G + +           H 
Sbjct: 59  GDGWRLSDCVLVVTVEPCTMCAGAITLSRIGTVVFGAWEPKTGAVGSLWDVVRDRRLAHR 118

Query: 126 PEIYPGISEQRSRQIIQDFF 145
           P++Y G+ E     +++ FF
Sbjct: 119 PQVYSGVLEAECAALLRGFF 138


>gi|332704280|ref|ZP_08424368.1| CMP/dCMP deaminase, zinc-binding protein [Desulfovibrio africanus
           str. Walvis Bay]
 gi|332554429|gb|EGJ51473.1| CMP/dCMP deaminase, zinc-binding protein [Desulfovibrio africanus
           str. Walvis Bay]
          Length = 174

 Score =  181 bits (460), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 51/143 (35%), Positives = 71/143 (49%), Gaps = 1/143 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  AL +A  A    E+PVGA  +     ++++A N    L D TAHAE+L +R G   L
Sbjct: 23  MDVALRQAHEAGSMGEVPVGAALLSAEGSLLAQAHNAPLSLNDPTAHAEMLCLRQGASTL 82

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L    L VTLEPC MC  A+  ARI  L  GA +PK G + +  +   L   +H  
Sbjct: 83  GNYRLTGCILAVTLEPCIMCLGALVHARIAGLVIGARDPKAGAVLSRLKGLRLPFLNHQF 142

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
            +  GI  +   +++  FF  RR
Sbjct: 143 WVLEGIMAEDCGKLLSSFFLRRR 165


>gi|188588285|ref|YP_001922596.1| tRNA-specific adenosine deaminase [Clostridium botulinum E3 str.
           Alaska E43]
 gi|188498566|gb|ACD51702.1| tRNA-specific adenosine deaminase [Clostridium botulinum E3 str.
           Alaska E43]
          Length = 157

 Score =  181 bits (460), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 54/150 (36%), Positives = 81/150 (54%), Gaps = 2/150 (1%)

Query: 1   MKKGNV-FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
           M++ ++ F+  A EEA+ A  + E+P+GAV V +N +IS+A N    LKD TAHAEILAI
Sbjct: 1   MEEKSMDFLDIAKEEAKKAMSKGEVPIGAVIVKDNIVISKAHNLKETLKDATAHAEILAI 60

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
           R   + L    L   ++YVTLEPCTMC +AI  +RI +L+ G  N   G   +       
Sbjct: 61  REASKFLDDWRLNGTEMYVTLEPCTMCTSAIIQSRISKLHIGTFNKDMGACGSIINLIDD 120

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
                   +   + ++    ++  FF  +R
Sbjct: 121 RMLESFLNVNW-LYDEECSNLLMKFFNLKR 149


>gi|213157131|ref|YP_002319176.1| tRNA-specific adenosine deaminase [Acinetobacter baumannii AB0057]
 gi|215483589|ref|YP_002325810.1| tRNA-specific adenosine deaminase [Acinetobacter baumannii
           AB307-0294]
 gi|239502187|ref|ZP_04661497.1| putative deaminase [Acinetobacter baumannii AB900]
 gi|301345934|ref|ZP_07226675.1| putative deaminase [Acinetobacter baumannii AB056]
 gi|213056291|gb|ACJ41193.1| tRNA-specific adenosine deaminase [Acinetobacter baumannii AB0057]
 gi|213987060|gb|ACJ57359.1| tRNA-specific adenosine deaminase [Acinetobacter baumannii
           AB307-0294]
          Length = 158

 Score =  181 bits (460), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 58/139 (41%), Positives = 74/139 (53%), Gaps = 1/139 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  A E+A+ AA + EIPVGAV V  NK+I    N    L D TAHAEI AIR  C  L 
Sbjct: 1   MQLAYEQAELAAKQGEIPVGAVIVSQNKLIGAGFNAPIGLSDPTAHAEIQAIRAACESLK 60

Query: 68  QEILP-EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
              LP +  LYVTLEPCTMC  A+  ARI+ + +G + PK G + +  Q       +H  
Sbjct: 61  NYRLPEDATLYVTLEPCTMCVGALVHARIKHVVFGTTEPKAGSLVSARQLLENGYYNHKF 120

Query: 127 EIYPGISEQRSRQIIQDFF 145
               G   ++  Q +  FF
Sbjct: 121 TFEHGCLHEKCAQQLSLFF 139


>gi|170759519|ref|YP_001785356.1| cytidine/deoxycytidylate deaminase family protein [Clostridium
           botulinum A3 str. Loch Maree]
 gi|169406508|gb|ACA54919.1| cytidine/deoxycytidylate deaminase family protein [Clostridium
           botulinum A3 str. Loch Maree]
          Length = 145

 Score =  181 bits (460), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 57/145 (39%), Positives = 78/145 (53%), Gaps = 1/145 (0%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           N ++  A+ EA+ +    E+PVGA+ V  NKII+++ N    LKD  AHAEIL+I+  C 
Sbjct: 2   NDYIEYAIIEAKKSLAIGEVPVGAIIVKENKIIAKSHNLKETLKDPIAHAEILSIKKACN 61

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
           IL    L    +YVTLEPC MCA+AI  +RI  LY G  +P GG   +       A    
Sbjct: 62  ILGDWRLKGCKMYVTLEPCPMCASAIIQSRISELYIGTFDPVGGACGSAVNITNNAHLKS 121

Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149
           +  I   +      +II +FFK  R
Sbjct: 122 NLNIKW-LYNDECSRIITNFFKNIR 145


>gi|193077204|gb|ABO11996.2| putative deaminase [Acinetobacter baumannii ATCC 17978]
          Length = 158

 Score =  181 bits (460), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 58/139 (41%), Positives = 74/139 (53%), Gaps = 1/139 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  A E+A+ AA + EIPVGAV V  NK+I    N    L D TAHAEI AIR  C  L 
Sbjct: 1   MQLAYEQAELAAEQGEIPVGAVIVSQNKLIGAGFNAPIGLSDPTAHAEIQAIRAACESLK 60

Query: 68  QEILP-EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
              LP +  LYVTLEPCTMC  A+  ARI+ + +G + PK G + +  Q       +H  
Sbjct: 61  NYRLPEDATLYVTLEPCTMCVGALVHARIKHVVFGTTEPKAGSLVSARQLLENGYYNHKF 120

Query: 127 EIYPGISEQRSRQIIQDFF 145
               G   ++  Q +  FF
Sbjct: 121 TFEHGCLHEKCAQQLSLFF 139


>gi|116070709|ref|ZP_01467978.1| cytidine/deoxycytidylate deaminase family protein [Synechococcus
           sp. BL107]
 gi|116066114|gb|EAU71871.1| cytidine/deoxycytidylate deaminase family protein [Synechococcus
           sp. BL107]
          Length = 157

 Score =  180 bits (459), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 48/149 (32%), Positives = 75/149 (50%), Gaps = 1/149 (0%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIR 60
            + + +M   L+ AQ   L  E+PV AV +  + + I    NR    +D   HAE++A+R
Sbjct: 5   DRFHEWMKVLLQRAQVNGLSGEVPVAAVVLGPDGRAIGHGRNRRETEQDPLGHAELVALR 64

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
               IL      +  L VTLEPC MCA A+  AR+  + +GA + K GG+       T  
Sbjct: 65  QAALILGDWRFNQCCLIVTLEPCPMCAGALVQARMGTVVFGAHDRKRGGLGGTMNLSTHP 124

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
           + HH   +  G+ E  +   ++ +FK+RR
Sbjct: 125 SAHHKMTVIGGVMEAEASTQLEQWFKQRR 153


>gi|187934949|ref|YP_001887626.1| tRNA-specific adenosine deaminase [Clostridium botulinum B str.
           Eklund 17B]
 gi|187723102|gb|ACD24323.1| tRNA-specific adenosine deaminase [Clostridium botulinum B str.
           Eklund 17B]
          Length = 152

 Score =  180 bits (459), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 52/143 (36%), Positives = 77/143 (53%), Gaps = 1/143 (0%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           F+  A EEA+ A  + E+P+GAV V ++ +IS+A N    LKD TAHAEILAIR   + L
Sbjct: 3   FLDIAKEEARIAMSKGEVPIGAVIVKDDIVISKAHNLKETLKDATAHAEILAIRKAAKFL 62

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L   ++YVTLEPC+MCA+AI  +RI +L+ G  N   G   +              
Sbjct: 63  GDWRLKGTEMYVTLEPCSMCASAIIQSRISKLHIGTFNKDMGACGSVINLIDDRQLESFL 122

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
            +   + ++    ++  FF  +R
Sbjct: 123 NVNW-LYDEECSNLLMKFFSLKR 144


>gi|212703407|ref|ZP_03311535.1| hypothetical protein DESPIG_01450 [Desulfovibrio piger ATCC 29098]
 gi|212673152|gb|EEB33635.1| hypothetical protein DESPIG_01450 [Desulfovibrio piger ATCC 29098]
          Length = 144

 Score =  180 bits (459), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 58/143 (40%), Positives = 81/143 (56%), Gaps = 1/143 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  AL+EA+ AA  +E+PVGAV V  + ++++RA NR   L D TAHAEILA+R      
Sbjct: 1   MRLALDEARQAAREDEVPVGAVLVAADGRLLARAHNRPVALHDPTAHAEILALRAAGAAS 60

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L    L VTLEPC MCAAA+  AR+  + YGA++   G + + T+       +H  
Sbjct: 61  GNYRLGGGVLVVTLEPCAMCAAALVHARLAGVVYGAADRLAGAVTSCTETLDQPFFNHRV 120

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
               G+  + S  ++QDFF  RR
Sbjct: 121 WHMGGVLARESVDLLQDFFAGRR 143


>gi|325092201|gb|EGC45511.1| tRNA specific adenosine deaminase [Ajellomyces capsulatus H88]
          Length = 197

 Score =  180 bits (459), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 46/146 (31%), Positives = 74/146 (50%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           +K   FM  AL+  + A    E PVG V V N+++I    N   +  + T HAE LAI  
Sbjct: 15  QKHEYFMKKALDMGEEALASGETPVGCVLVHNDEVIGSGMNDTNKSMNGTRHAEFLAIEE 74

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
             R   + I  E DLYVT+EPC MCA+A+   +IR +Y+G +N + GG       ++   
Sbjct: 75  VLRNYPRSIFRETDLYVTVEPCIMCASALRQYQIRHVYFGCANERFGGTGGVLNLHSDPG 134

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKE 147
                 +  G+  + +  +++ F+ +
Sbjct: 135 IDPPYGLTGGLFRREAIMLLRRFYIQ 160


>gi|258650784|ref|YP_003199940.1| CMP/dCMP deaminase zinc-binding [Nakamurella multipartita DSM
           44233]
 gi|258554009|gb|ACV76951.1| CMP/dCMP deaminase zinc-binding [Nakamurella multipartita DSM
           44233]
          Length = 159

 Score =  180 bits (459), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 51/142 (35%), Positives = 70/142 (49%), Gaps = 1/142 (0%)

Query: 9   SCALEEAQNAALRNEIPVGA-VAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
             AL  A+ A    ++P+GA V   +  +I R  N      D TAHAEILA+R       
Sbjct: 14  RQALNLARRAPDTGDLPIGALVLDPDGVVIGRGRNAREATGDPTAHAEILALRQAAAARG 73

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
           Q  L    L VT+EPCTMCA A+ LARI  + +G   PK G   +           H  +
Sbjct: 74  QWNLTGCTLAVTVEPCTMCAGAVVLARIETVVFGCWEPKTGAAGSLWDVLRDRRLTHRVQ 133

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
           +  G+ EQ S Q+++ FF + R
Sbjct: 134 VRGGVLEQESAQLLRTFFADHR 155


>gi|170755371|ref|YP_001779653.1| cytidine/deoxycytidylate deaminase family protein [Clostridium
           botulinum B1 str. Okra]
 gi|169120583|gb|ACA44419.1| cytidine/deoxycytidylate deaminase family protein [Clostridium
           botulinum B1 str. Okra]
          Length = 145

 Score =  180 bits (459), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 56/145 (38%), Positives = 80/145 (55%), Gaps = 1/145 (0%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           N ++  A+ EA+ A    E+PVGA+ V  NKII+++ N    LKD TAHAEILAI+  C 
Sbjct: 2   NDYIEYAIIEAEKALAIGEVPVGAIIVKENKIIAKSHNLKESLKDPTAHAEILAIKEACN 61

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
            +    L    +YVTLEPC MCA+AI  +RI  L+ G  +P GG   +       +   +
Sbjct: 62  TIHNWRLKGCKMYVTLEPCAMCASAIIQSRISELHIGTFDPVGGACGSVVNITNNSYLKN 121

Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149
           +  I   + +    +II +FFK  R
Sbjct: 122 NLNIKW-LYDDECSRIITNFFKNIR 145


>gi|257066772|ref|YP_003153028.1| CMP/dCMP deaminase zinc-binding [Anaerococcus prevotii DSM 20548]
 gi|256798652|gb|ACV29307.1| CMP/dCMP deaminase zinc-binding [Anaerococcus prevotii DSM 20548]
          Length = 180

 Score =  180 bits (459), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 54/148 (36%), Positives = 77/148 (52%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           K+   FM+ A+ EA+ A    E+PVGAV V + KII R  N   + K    HAE++AI+ 
Sbjct: 24  KEDYFFMAEAINEARVARFIEEVPVGAVVVYDGKIIGRGHNLTYKGKSALKHAELMAIKE 83

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
               +    L E  +YVT+EPC+MCA AI  +RI RL  G  + K G   + T      +
Sbjct: 84  ASSWMDDFRLEECTMYVTMEPCSMCAGAIINSRIDRLVVGIRDHKRGACGSNTNVCGDRS 143

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
             H  +   G+ E+ +   IQ FF+  R
Sbjct: 144 QLHFVDAEFGLMEEEALFEIQTFFRYLR 171


>gi|238061540|ref|ZP_04606249.1| CMP/dCMP deaminase [Micromonospora sp. ATCC 39149]
 gi|237883351|gb|EEP72179.1| CMP/dCMP deaminase [Micromonospora sp. ATCC 39149]
          Length = 172

 Score =  180 bits (459), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 47/127 (37%), Positives = 68/127 (53%), Gaps = 1/127 (0%)

Query: 21  RNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVT 79
            +++PVGAV    +   ++   N      D TAHAE+LA+R     L +  L +  L VT
Sbjct: 46  ADDVPVGAVIYGPDGTELASGRNERELTGDPTAHAEVLALRRAAERLGRWRLDDCTLVVT 105

Query: 80  LEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139
           LEPCTMCA AI LARI  + +GA  PK G   +          +H PE+Y G+ E  +  
Sbjct: 106 LEPCTMCAGAIVLARIATVVFGAWEPKTGAAGSLWDVLRDRRLNHRPEVYGGLLEAENSA 165

Query: 140 IIQDFFK 146
           +++ FF+
Sbjct: 166 VLRAFFR 172


>gi|325266384|ref|ZP_08133062.1| tRNA-specific adenosine deaminase [Kingella denitrificans ATCC
           33394]
 gi|324982177|gb|EGC17811.1| tRNA-specific adenosine deaminase [Kingella denitrificans ATCC
           33394]
          Length = 241

 Score =  180 bits (458), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 53/149 (35%), Positives = 82/149 (55%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +++   FM  AL +A  AA   E+PVGAV V    I+++A NR     +V+ HAEILA+ 
Sbjct: 91  LEEQQKFMQAALVQAALAAEAGEVPVGAVVVHRGNIVAQAYNRCVADCNVSHHAEILALA 150

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              ++L    L E D+YV+LEPC MCA A+  AR+ R+ + AS PK G   +    +   
Sbjct: 151 QAGQVLGSYRLNECDVYVSLEPCAMCAGALMQARVARVIFAASEPKTGAAGSVVNLFANK 210

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +    +  G+    ++ I+Q FF+ +R
Sbjct: 211 ALNAHTAVSGGVLADEAQAILQQFFQNKR 239


>gi|189220193|ref|YP_001940833.1| Cytosine/adenosine deaminase [Methylacidiphilum infernorum V4]
 gi|189187051|gb|ACD84236.1| Cytosine/adenosine deaminase [Methylacidiphilum infernorum V4]
          Length = 173

 Score =  180 bits (458), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 58/149 (38%), Positives = 79/149 (53%), Gaps = 3/149 (2%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           + +   FM  ALE+A+ A    E+PVGAV V   +I+    NR    +DVTAHAE+ AIR
Sbjct: 14  LSRDYYFMGLALEKAKEAFDNGEVPVGAVIVRGEEILGFGRNRVERHRDVTAHAEMEAIR 73

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              + +    L    LYVT EPC MC  A+ L+RI R+ +G S+PK         F+T  
Sbjct: 74  QSQQRVGDWRLDSTTLYVTKEPCLMCWGAVFLSRIERVVFGISDPKQADFCCIKDFFTAR 133

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
                PEI PG+  Q S +++  FF   R
Sbjct: 134 K---KPEILPGVRSQESLELMHQFFFILR 159


>gi|310657417|ref|YP_003935138.1| yaaj [Clostridium sticklandii DSM 519]
 gi|308824195|emb|CBH20233.1| YaaJ [Clostridium sticklandii]
          Length = 157

 Score =  180 bits (458), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 56/151 (37%), Positives = 77/151 (50%), Gaps = 6/151 (3%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M     FM  AL+EA  +   NE+P+G V V + +II+RA N   + KD   HAE++AI+
Sbjct: 1   MMNKEFFMREALKEALKSYSINEVPIGCVIVKDGEIIARAHNNREQNKDPLGHAELIAIK 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              + L    L   D+YVTLEPC MC+ AI  +RI  LY GA + K G + +        
Sbjct: 61  NAAKHLGGWRLVGCDMYVTLEPCIMCSGAIMDSRIENLYIGAIDDKRGCVASYLPILKDR 120

Query: 121 TCHHSP--EIYPGISEQRSRQIIQDFFKERR 149
              H+   E    I    S  II+ FF+  R
Sbjct: 121 MIPHNVNYEYIQTI----SPYIIKRFFRHLR 147


>gi|160871633|ref|ZP_02061765.1| tRNA-specific adenosine deaminase [Rickettsiella grylli]
 gi|159120432|gb|EDP45770.1| tRNA-specific adenosine deaminase [Rickettsiella grylli]
          Length = 160

 Score =  180 bits (458), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 53/148 (35%), Positives = 86/148 (58%), Gaps = 2/148 (1%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           ++   +M  AL +A +A   +E+P+GA+ V N+ +I+ A N+     D TAHAEI+ ++ 
Sbjct: 10  QRDTAYMQLALNQAAHAKRSHEVPIGAILVWNDHVIATAYNQTLTRCDPTAHAEIVVLQE 69

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
             + L    L +  LYVTLEPC MC  A+  ARI+RL +GA + + G I +  Q + L  
Sbjct: 70  TAKQLKNHRLLDATLYVTLEPCLMCVGAMIQARIKRLVFGAYDARLGTIMH--QLHRLKG 127

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +HS E+  G+  +   + ++ FFK +R
Sbjct: 128 LNHSFEVAEGVLSEACSKELKQFFKYKR 155


>gi|227824625|ref|ZP_03989457.1| CMP/dCMP deaminase [Acidaminococcus sp. D21]
 gi|226905124|gb|EEH91042.1| CMP/dCMP deaminase [Acidaminococcus sp. D21]
          Length = 153

 Score =  180 bits (458), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 56/128 (43%), Positives = 75/128 (58%)

Query: 22  NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81
            EIPVGA+ V + ++I+R  NR     D TAHAEIL IR  C  L +  L +  LYVT+E
Sbjct: 26  GEIPVGAILVQDGRVIARNHNRRERAHDATAHAEILVIREACEKLRRWRLADSTLYVTME 85

Query: 82  PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141
           PC MCA AI  ARI R+ +GAS+   G   +  Q     + H +  I  GI  +R ++I+
Sbjct: 86  PCPMCAGAIYNARIGRVVFGASDSVAGACGSLFQIPLHPSLHANTIIKAGIEAERCKKIL 145

Query: 142 QDFFKERR 149
           Q+FF  RR
Sbjct: 146 QEFFTRRR 153


>gi|254822445|ref|ZP_05227446.1| hypothetical protein MintA_21101 [Mycobacterium intracellulare ATCC
           13950]
          Length = 152

 Score =  180 bits (458), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 55/151 (36%), Positives = 77/151 (50%), Gaps = 3/151 (1%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAI 59
           M      +  AL  A  A  R ++P+GAV +  +   ++RA N    L D TAHAEILA+
Sbjct: 1   MIPDEQLIRSALSVAATAGPR-DVPIGAVVISADGTELARAVNAREALGDPTAHAEILAL 59

Query: 60  RMGCRILSQ-EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
           R    +L     L    L VT+EPCTMCA A+ L+RI RL +GA  PK G + +      
Sbjct: 60  RAAAEVLGDGWRLEGATLAVTVEPCTMCAGALVLSRIGRLVFGAWEPKTGAVGSLWDVVR 119

Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
               +H PE+  G+  Q     ++ FF  +R
Sbjct: 120 DRRLNHRPEVRGGVLAQECAAPLEAFFARQR 150


>gi|116074668|ref|ZP_01471929.1| cytidine/deoxycytidylate deaminase family protein [Synechococcus
           sp. RS9916]
 gi|116067890|gb|EAU73643.1| cytidine/deoxycytidylate deaminase family protein [Synechococcus
           sp. RS9916]
          Length = 167

 Score =  180 bits (457), Expect = 7e-44,   Method: Composition-based stats.
 Identities = 44/149 (29%), Positives = 74/149 (49%), Gaps = 1/149 (0%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIR 60
            +   +M   L+ A+    + E+PV A+ +    + I   GN     +D   HAE++AIR
Sbjct: 5   DQQRFWMGLLLQRAEAIGRQGEVPVSALVLDGKGRCIGFGGNTRERDQDPLGHAELVAIR 64

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
               +     L +  L VTLEPC MCA A+  AR+ ++ YGA +PK G +          
Sbjct: 65  QATVLRGDWRLNDCTLLVTLEPCPMCAGALVQARMGQVIYGARDPKRGAMGGTIDLSQHP 124

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
           + HH  ++  G+ E+ +  ++  +F+ RR
Sbjct: 125 SAHHHMKVIGGVLEEEASTMLAQWFRLRR 153


>gi|288818013|ref|YP_003432360.1| tRNA-specific adenosine deaminase [Hydrogenobacter thermophilus
           TK-6]
 gi|288787412|dbj|BAI69159.1| tRNA-specific adenosine deaminase [Hydrogenobacter thermophilus
           TK-6]
 gi|308751614|gb|ADO45097.1| CMP/dCMP deaminase zinc-binding protein [Hydrogenobacter
           thermophilus TK-6]
          Length = 149

 Score =  180 bits (457), Expect = 7e-44,   Method: Composition-based stats.
 Identities = 51/145 (35%), Positives = 80/145 (55%), Gaps = 1/145 (0%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
             F+   L  A+ A  R E PVG V V + K+I++A NR  ELKD TAHAE+LA+R    
Sbjct: 2   EKFIELCLNLARRAYERGETPVGCVVVKDGKVIAKAHNRVEELKDPTAHAEMLALREASE 61

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
            +  + L   ++YV+LEPC MC  A+ L R+ RL + A + + GG+ +          HH
Sbjct: 62  SMGGKYLYGCEIYVSLEPCVMCTYAMILKRVERLIFLAQDYRHGGVMSMYSLLDDMRFHH 121

Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149
                  +  + ++++++DFF+  R
Sbjct: 122 RVRWEY-MPVEEAQKLLRDFFRNLR 145


>gi|251781204|ref|ZP_04824120.1| tRNA-specific adenosine deaminase [Clostridium botulinum E1 str.
           'BoNT E Beluga']
 gi|243081651|gb|EES47712.1| tRNA-specific adenosine deaminase [Clostridium botulinum E1 str.
           'BoNT E Beluga']
          Length = 152

 Score =  180 bits (457), Expect = 7e-44,   Method: Composition-based stats.
 Identities = 53/143 (37%), Positives = 76/143 (53%), Gaps = 1/143 (0%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           F+  A EEA+ A  + E+P+GAV V +N +IS+A N    LKD TAHAEILAIR   + L
Sbjct: 3   FLDIAKEEAKKAMSKGEVPIGAVIVKDNIVISKAHNLKETLKDATAHAEILAIREASKFL 62

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L   ++YVTLEPCTMC +AI  +RI +L+ G  N   G   +              
Sbjct: 63  EDWRLNGTEMYVTLEPCTMCTSAIIQSRISKLHIGTFNKDMGACGSIINLIDDRMLESFL 122

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
            +   + ++    ++  FF  +R
Sbjct: 123 NVNW-LYDEECSNLLMKFFNLKR 144


>gi|254513988|ref|ZP_05126049.1| tRNA-specific adenosine deaminase [gamma proteobacterium NOR5-3]
 gi|219676231|gb|EED32596.1| tRNA-specific adenosine deaminase [gamma proteobacterium NOR5-3]
          Length = 150

 Score =  180 bits (457), Expect = 7e-44,   Method: Composition-based stats.
 Identities = 53/150 (35%), Positives = 77/150 (51%), Gaps = 1/150 (0%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M   ++FM  AL+ AQ AA R E+PVGAV V  ++I+    N      D TAHAEI A+R
Sbjct: 1   MSAHDLFMLRALDLAQEAASRGEVPVGAVVVEGDRILGEGRNAQIASMDPTAHAEINALR 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
               ++    +P   LYVTLEPC+MC  A+  ARI  + + A  P+ G + +        
Sbjct: 61  AASALVKNYRIPGATLYVTLEPCSMCCGALVHARISTVVFAAREPRAGAVVSTRSLLDET 120

Query: 121 TCHHSPEIYPGI-SEQRSRQIIQDFFKERR 149
             +H       +     S  +++ FF+ERR
Sbjct: 121 AFNHRVAWLEAVEHAPASATLLRSFFRERR 150


>gi|294791140|ref|ZP_06756297.1| tRNA(Ile)-lysidine synthase [Scardovia inopinata F0304]
 gi|294457611|gb|EFG25965.1| tRNA(Ile)-lysidine synthase [Scardovia inopinata F0304]
          Length = 152

 Score =  180 bits (457), Expect = 8e-44,   Method: Composition-based stats.
 Identities = 47/143 (32%), Positives = 74/143 (51%), Gaps = 1/143 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  ALE A+ +A  +EIPVGAV +     +++   N   E  D  +HAEI  +R   R+ 
Sbjct: 9   MGVALENARKSADFDEIPVGAVVLNSEGAVLAAERNHREEKADPFSHAEIEVMREAARVR 68

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
                 +  L VT+EPC MCA AI  A + R+ +GA + K G + +             P
Sbjct: 69  ESWNFEDCTLVVTMEPCPMCAGAIVSAHMGRVVFGAWDEKMGALGSVWDIARDPHVGFRP 128

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E++ G+      +I+++FF+E+R
Sbjct: 129 EVFGGVRADECAEILREFFEEKR 151


>gi|15604662|ref|NP_221180.1| hypothetical protein RP831 [Rickettsia prowazekii str. Madrid E]
 gi|6226400|sp|Q9ZCC6|Y831_RICPR RecName: Full=Uncharacterized deaminase RP831
 gi|3861357|emb|CAA15256.1| unknown [Rickettsia prowazekii]
          Length = 148

 Score =  180 bits (457), Expect = 8e-44,   Method: Composition-based stats.
 Identities = 65/144 (45%), Positives = 96/144 (66%), Gaps = 2/144 (1%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVL--NNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M  AL++A+ A  +NE+PVG V V   N KII  + N   E K+   HAEI+AI   C +
Sbjct: 1   MEQALKQARLAFDKNEVPVGVVIVCRLNQKIIVSSHNNIEEKKNPLCHAEIIAINTACNL 60

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           +S + L + D+YVTLEPC MCA+AIS +R++RL+YGAS+ K G +E+  +++   +C + 
Sbjct: 61  ISSKNLNDYDIYVTLEPCAMCASAISHSRLKRLFYGASDSKHGAVESNLRYFNSNSCFYR 120

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
           PEIY GI  + SR ++Q+FF+  R
Sbjct: 121 PEIYSGILSEHSRFLMQEFFQRIR 144


>gi|313673213|ref|YP_004051324.1| cmp/dcmp deaminase zinc-binding protein [Calditerrivibrio
           nitroreducens DSM 19672]
 gi|312939969|gb|ADR19161.1| CMP/dCMP deaminase zinc-binding protein [Calditerrivibrio
           nitroreducens DSM 19672]
          Length = 154

 Score =  179 bits (456), Expect = 8e-44,   Method: Composition-based stats.
 Identities = 52/150 (34%), Positives = 85/150 (56%), Gaps = 1/150 (0%)

Query: 1   MKK-GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
           M     +FM   ++ A+ A   +++P+GA+ V++ KII+   NR +  K+   HAEI+A+
Sbjct: 1   MDDIDLLFMKKTIQVAKRALKYDDVPIGAIVVMDGKIIASGYNRKKTTKNPLDHAEIIAM 60

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
           +   R +    L    LY TLEPC MCA AI   RI+R+ +G   PK GG+ +  + + +
Sbjct: 61  KKAARKIGDWRLNNCVLYSTLEPCIMCAGAILHYRIKRVVFGTLEPKFGGVVSNDRIFDI 120

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
            T +H  E   G  E+  + +++DFFK+ R
Sbjct: 121 KTLNHRVEYEFGFFEEEIKGMMRDFFKKVR 150


>gi|53719734|ref|YP_108720.1| putative deaminase [Burkholderia pseudomallei K96243]
 gi|52210148|emb|CAH36126.1| putative deaminase [Burkholderia pseudomallei K96243]
          Length = 174

 Score =  179 bits (456), Expect = 9e-44,   Method: Composition-based stats.
 Identities = 53/148 (35%), Positives = 80/148 (54%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           ++   +M  AL  A+ A    E+PVGAV V  +++I+R  N      D +AHAE+ A+R 
Sbjct: 7   ERDRRYMRLALAAAEEARAAGEVPVGAVIVRGDEVIARGFNHPIGGHDPSAHAEMAALRA 66

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
             R L    +P  +LYVTLEPC MC+ AI  ARI R+ +GA +PK G   +    +  A 
Sbjct: 67  AARALRNYRMPGCELYVTLEPCLMCSGAIMHARIARVVFGAPDPKTGACGSVVDAFADAR 126

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H   +  G+       +++ FF +RR
Sbjct: 127 LNHHTTVEGGVLADECGAVLKSFFAQRR 154


>gi|325962140|ref|YP_004240046.1| tRNA-adenosine deaminase [Arthrobacter phenanthrenivorans Sphe3]
 gi|323468227|gb|ADX71912.1| tRNA-adenosine deaminase [Arthrobacter phenanthrenivorans Sphe3]
          Length = 157

 Score =  179 bits (456), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 49/139 (35%), Positives = 71/139 (51%), Gaps = 12/139 (8%)

Query: 23  EIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQ-----------EI 70
           ++P+GAV +  +  ++    N+  EL D TAHAE++AIR     L Q             
Sbjct: 16  DVPIGAVVIGPDGAVLGSGRNQREELGDPTAHAEVVAIREAAERLRQLSLNGGGRGDGWR 75

Query: 71  LPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYP 130
           L +  L VTLEPC MCA AI LARI R+ +GA + K G   +          +H  E+YP
Sbjct: 76  LSDCTLIVTLEPCAMCAGAIVLARIPRVVFGAWDEKAGAAGSVFDVLRERRLNHWVEVYP 135

Query: 131 GISEQRSRQIIQDFFKERR 149
           G+ E     ++++FF   R
Sbjct: 136 GVREAECAALLREFFAGHR 154


>gi|58617315|ref|YP_196514.1| hypothetical protein ERGA_CDS_05880 [Ehrlichia ruminantium str.
           Gardel]
 gi|58416927|emb|CAI28040.1| Conserved hypothetical protein (putative cytidine deaminase)
           [Ehrlichia ruminantium str. Gardel]
          Length = 145

 Score =  179 bits (456), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 76/143 (53%), Positives = 95/143 (66%), Gaps = 4/143 (2%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  A+ +AQ      E+PVGAV V N K+IS   N N +  D TAHAEIL+IR  C +L
Sbjct: 6   YMRLAIGKAQE--DCLEVPVGAVIVYNGKVISCQSNSNIKNCDPTAHAEILSIRHACIVL 63

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
           S  IL + D+YVTLEPC MCA AIS ARIRRLY+GA N K GGIENG + +    CH  P
Sbjct: 64  STHILNQCDMYVTLEPCAMCAQAISFARIRRLYFGAYNKKYGGIENGARVF--HFCHSVP 121

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+Y GI E+ + +++ DFFK  R
Sbjct: 122 EVYGGILEEENIRLMTDFFKRLR 144


>gi|198443277|pdb|3DH1|A Chain A, Crystal Structure Of Human Trna-Specific Adenosine-34
           Deaminase Subunit Adat2
 gi|198443278|pdb|3DH1|B Chain B, Crystal Structure Of Human Trna-Specific Adenosine-34
           Deaminase Subunit Adat2
 gi|198443279|pdb|3DH1|C Chain C, Crystal Structure Of Human Trna-Specific Adenosine-34
           Deaminase Subunit Adat2
 gi|198443280|pdb|3DH1|D Chain D, Crystal Structure Of Human Trna-Specific Adenosine-34
           Deaminase Subunit Adat2
          Length = 189

 Score =  179 bits (455), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 45/155 (29%), Positives = 76/155 (49%), Gaps = 8/155 (5%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M++   +M  A+  A+ A    E+PVG + V NN+++ +  N   + K+ T HAE++AI 
Sbjct: 23  MEETEKWMEEAMHMAKEALENTEVPVGCLMVYNNEVVGKGRNEVNQTKNATRHAEMVAID 82

Query: 61  MGCRIL------SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGT 114
                         E+     LYVT+EPC MCAAA+ L +I  + YG  N + GG  +  
Sbjct: 83  QVLDWCRQSGKSPSEVFEHTVLYVTVEPCIMCAAALRLMKIPLVVYGCQNERFGGCGSVL 142

Query: 115 QF--YTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
                 L       +  PG   + + ++++ F+K+
Sbjct: 143 NIASADLPNTGRPFQCIPGYRAEEAVEMLKTFYKQ 177


>gi|255326091|ref|ZP_05367178.1| tRNA-specific adenosine deaminase [Rothia mucilaginosa ATCC 25296]
 gi|255296802|gb|EET76132.1| tRNA-specific adenosine deaminase [Rothia mucilaginosa ATCC 25296]
          Length = 158

 Score =  179 bits (455), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 55/148 (37%), Positives = 72/148 (48%), Gaps = 1/148 (0%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRM 61
           + + +M  AL E   A  R EIP+GAV V     II  AGN      D +AHAE+ AIR 
Sbjct: 10  EHSEWMVRALAEGAAAGERGEIPIGAVVVDEQGAIIGSAGNTREREHDPSAHAEVNAIRQ 69

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
                 Q  L    L VT+EPC MCA  I  +R+  + +GA   K G   +         
Sbjct: 70  AAAHRGQWRLDGCTLVVTVEPCLMCAGTILASRVSTVVFGAWEEKTGAAGSRYDVLRDGR 129

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
              +PE+Y G+      Q++ DFFKERR
Sbjct: 130 VAPAPEVYAGVRADECAQLMVDFFKERR 157


>gi|229492640|ref|ZP_04386443.1| tRNA-specific adenosine deaminase [Rhodococcus erythropolis SK121]
 gi|229320626|gb|EEN86444.1| tRNA-specific adenosine deaminase [Rhodococcus erythropolis SK121]
          Length = 153

 Score =  179 bits (455), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 51/149 (34%), Positives = 79/149 (53%), Gaps = 3/149 (2%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKI-ISRAGNRNRELKDVTAHAEILAIRM 61
                +  A+  A++A+   ++PVGAV    + + ++RA N      D TAHAEILA+R 
Sbjct: 5   DDQRMIRAAIVAARSASDA-DVPVGAVVFDADGVEVARASNAREASSDPTAHAEILALRA 63

Query: 62  GCRILSQ-EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
             +       L    L VTLEPCTMCA A+ LAR+ R+ +GA  PK G + +        
Sbjct: 64  AAKTYGDGWRLEGATLAVTLEPCTMCAGALVLARVSRVVFGAWEPKTGAVGSLWDVVRDK 123

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
              + P++  G+ E     +++DFF+E+R
Sbjct: 124 RLTYRPQVRGGVLEDECAGLLEDFFREQR 152


>gi|304390572|ref|ZP_07372525.1| cytidine/deoxycytidylate deaminase [Mobiluncus curtisii subsp.
           curtisii ATCC 35241]
 gi|304326328|gb|EFL93573.1| cytidine/deoxycytidylate deaminase [Mobiluncus curtisii subsp.
           curtisii ATCC 35241]
          Length = 180

 Score =  179 bits (455), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 54/144 (37%), Positives = 75/144 (52%), Gaps = 2/144 (1%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISR-AGNRN-RELKDVTAHAEILAIRMGCRI 65
           +  A   AQ A    +IPVGAV +    I++    N+      D +AHAEI+A+R     
Sbjct: 37  LDTAYRLAQKAGRAGDIPVGAVVLTPEGIVAGLGLNQRENPPYDPSAHAEIVALREAAGR 96

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           L +  L    L  TLEPCTMCA AI  ARI RL +GA +PK G   +       +  +H 
Sbjct: 97  LERWNLKGCTLVATLEPCTMCAGAIVNARISRLIFGAWDPKAGACGSIRDVVRDSRLNHQ 156

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
            E+  G+ E R + +++ FF ERR
Sbjct: 157 VEVKGGVDEPRIKALLKAFFGERR 180


>gi|326335838|ref|ZP_08202017.1| zinc-binding domain protein [Capnocytophaga sp. oral taxon 338 str.
           F0234]
 gi|325691982|gb|EGD33942.1| zinc-binding domain protein [Capnocytophaga sp. oral taxon 338 str.
           F0234]
          Length = 145

 Score =  179 bits (455), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 55/149 (36%), Positives = 82/149 (55%), Gaps = 6/149 (4%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M     FM  AL+EA+ A  + E+PVGA+  +N  II++  N    L DVTAHAEI AI 
Sbjct: 1   MLSDTYFMQKALQEAEIAFEQGEVPVGAIITINEIIIAKTHNLTERLGDVTAHAEIQAIT 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
                +  + L    LYVTLEPC MCA A+  ++I ++ Y +++ + G        Y   
Sbjct: 61  SASEYMGGKYLTNCTLYVTLEPCVMCAGALYWSQIGKIVYASTDERRG-----YHLYGN- 114

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             H   E+  GI E+ S Q+++ FF+++R
Sbjct: 115 LLHPKTEVIHGILEKESSQLLKKFFQQKR 143


>gi|212535962|ref|XP_002148137.1| tRNA-specific adenosine deaminase subunit TAD2, putative
           [Penicillium marneffei ATCC 18224]
 gi|210070536|gb|EEA24626.1| tRNA-specific adenosine deaminase subunit TAD2, putative
           [Penicillium marneffei ATCC 18224]
          Length = 190

 Score =  179 bits (455), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 46/146 (31%), Positives = 71/146 (48%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           +    FM  AL   + A    E PVG V VL  KII    N      + T HAE LAI  
Sbjct: 21  EDQEKFMKEALSMGEKALEAGETPVGCVLVLQGKIIGSGMNDTNRSMNGTRHAEFLAIEE 80

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
             +   + I   VDLYVT+EPC MCA+ +    IRR+++G +N + GG  +    ++   
Sbjct: 81  ALQTYPRSIFKHVDLYVTVEPCVMCASLLRQYNIRRVFFGCANERFGGTGSVLSLHSDPC 140

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKE 147
                 ++ GI +  +  +++ F+ +
Sbjct: 141 IDPRYPVHSGIFKNDAILLLRRFYIQ 166


>gi|257057632|ref|YP_003135464.1| tRNA-adenosine deaminase [Saccharomonospora viridis DSM 43017]
 gi|256587504|gb|ACU98637.1| tRNA-adenosine deaminase [Saccharomonospora viridis DSM 43017]
          Length = 147

 Score =  179 bits (455), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 50/143 (34%), Positives = 77/143 (53%), Gaps = 2/143 (1%)

Query: 9   SCALEEAQNAALRNEIPVGA-VAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
             AL  A+ A    ++P+GA V   + ++++ A N    L D TAHAE+LA+R   R+  
Sbjct: 5   RVALGFAERAVGTADVPIGAAVFSPDGRLLAGAHNARERLGDPTAHAEVLALREAARVHG 64

Query: 68  Q-EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L    L VT+EPCTMCA A+ LAR+ R+ +GA  P+ G + +          +H P
Sbjct: 65  DGWRLEGCTLAVTVEPCTMCAGALVLARVARVVFGAWEPRTGAVCSLWDVVRDRRLNHRP 124

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+  G+ E     ++ DFF ++R
Sbjct: 125 EVVGGVLESECAALLNDFFADQR 147


>gi|190890543|ref|YP_001977085.1| cytosine deaminase [Rhizobium etli CIAT 652]
 gi|190695822|gb|ACE89907.1| cytosine deaminase protein [Rhizobium etli CIAT 652]
          Length = 145

 Score =  179 bits (455), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 88/142 (61%), Positives = 110/142 (77%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  ALEEA+ A  R E+P+GAV V+++  +SR+GNR REL DVTAHAEI AIR+ C  L 
Sbjct: 1   MEMALEEARAAGERGEVPIGAVVVVDDIAVSRSGNRTRELNDVTAHAEIAAIRLACEALG 60

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
           QE L   DLYVTLEPCTMCAAAIS ARIRRLYYGA +PKGG ++NG +FYT  TCHH+PE
Sbjct: 61  QERLAGADLYVTLEPCTMCAAAISFARIRRLYYGAEDPKGGAVDNGVRFYTQPTCHHAPE 120

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
           +Y G +E +S +I++ FF ++R
Sbjct: 121 VYSGFNEVQSAEILRTFFLQKR 142


>gi|167894828|ref|ZP_02482230.1| putative deaminase [Burkholderia pseudomallei 7894]
          Length = 150

 Score =  179 bits (455), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 48/130 (36%), Positives = 71/130 (54%)

Query: 20  LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVT 79
              E+PVGAV V  +++I+R  N      D +AHAE+ A+R   R L    +P  +LYVT
Sbjct: 1   AAGEVPVGAVIVRGDEVIARGFNHPIGGHDPSAHAEMAALRAAARALRNYRMPGCELYVT 60

Query: 80  LEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139
           LEPC MC+ AI  ARI R+ +GA +PK G   +    +  A  +H   +  G+       
Sbjct: 61  LEPCLMCSGAIMHARIARVVFGAPDPKTGACGSVVDAFADARLNHHTTVEGGVLADECGA 120

Query: 140 IIQDFFKERR 149
           +++ FF +RR
Sbjct: 121 VLKSFFAQRR 130


>gi|53723703|ref|YP_103157.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia
           mallei ATCC 23344]
 gi|52427126|gb|AAU47719.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia
           mallei ATCC 23344]
          Length = 162

 Score =  179 bits (455), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 48/128 (37%), Positives = 71/128 (55%)

Query: 22  NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81
            E+PVGAV V  +++I+R  N      D +AHAE+ A+R   R L    +P  +LYVTLE
Sbjct: 15  GEVPVGAVIVRGDEVIARGFNHPIGGHDPSAHAEMAALRAAARALRNYRMPGCELYVTLE 74

Query: 82  PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141
           PC MC+ AI  ARI R+ +GA +PK G   +    +  A  +H   +  G+       ++
Sbjct: 75  PCLMCSGAIMHARIARVVFGAPDPKTGACGSVVDAFADARLNHHTTVEGGVLADECGAVL 134

Query: 142 QDFFKERR 149
           + FF +RR
Sbjct: 135 KSFFAQRR 142


>gi|302205290|gb|ADL09632.1| Cytosine/adenosine deaminase [Corynebacterium pseudotuberculosis
           C231]
          Length = 182

 Score =  178 bits (454), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 52/144 (36%), Positives = 72/144 (50%), Gaps = 3/144 (2%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMG-CRI 65
           M  A+ +AQ A    +IPVGAV    + +++ R  NR    +D   HAEI+AIR      
Sbjct: 40  MRQAIIQAQ-ATPPGDIPVGAVIFGPDGEVLGRGVNRREADRDPLGHAEIMAIREAVANH 98

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
                L +  L VTLEPCTMCA A+  ARI R+++GA  PK G   +           H 
Sbjct: 99  DDGWRLTDCTLAVTLEPCTMCAGALVGARIGRIFFGAYEPKTGACGSAFDVVRDPAVLHV 158

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
           PE+  GI +     ++  FF+  R
Sbjct: 159 PEVRGGILQDECAALVTHFFEGLR 182


>gi|302329844|gb|ADL20038.1| Cytosine/adenosine deaminase [Corynebacterium pseudotuberculosis
           1002]
          Length = 151

 Score =  178 bits (454), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 52/144 (36%), Positives = 72/144 (50%), Gaps = 3/144 (2%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMG-CRI 65
           M  A+ +AQ A    +IPVGAV    + +++ R  NR    +D   HAEI+AIR      
Sbjct: 9   MRQAIIQAQ-ATPPGDIPVGAVIFGPDGEVLGRGVNRREADRDPLGHAEIMAIREAVANH 67

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
                L +  L VTLEPCTMCA A+  ARI R+++GA  PK G   +           H 
Sbjct: 68  DDGWRLTDCTLAVTLEPCTMCAGALVGARIGRIFFGAYEPKTGACGSAFDVVRDPAVLHV 127

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
           PE+  GI +     ++  FF+  R
Sbjct: 128 PEVRGGILQDECAALVTHFFEGLR 151


>gi|257438151|ref|ZP_05613906.1| tRNA-specific adenosine deaminase [Faecalibacterium prausnitzii
           A2-165]
 gi|257199482|gb|EEU97766.1| tRNA-specific adenosine deaminase [Faecalibacterium prausnitzii
           A2-165]
          Length = 162

 Score =  178 bits (454), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 48/126 (38%), Positives = 72/126 (57%), Gaps = 1/126 (0%)

Query: 24  IPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83
           +PVGAV   N +II+ A N     K+   HAE+LAI   C+ L    L + +L+VTLEPC
Sbjct: 23  VPVGAVVARNGEIIAAAHNTRETEKNALHHAELLAIDAACKKLGGWRLWQCELFVTLEPC 82

Query: 84  TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQD 143
            MC+  I  +RIRR+ YGA++ K G   + T  + L   +H P +  G+  + ++ ++Q 
Sbjct: 83  PMCSGGIINSRIRRVVYGAADTKAGCCGSVTDLFALP-FNHHPVVERGLRAEEAQALLQA 141

Query: 144 FFKERR 149
           FF   R
Sbjct: 142 FFLRLR 147


>gi|254488088|ref|ZP_05101293.1| tRNA-specific adenosine deaminase [Roseobacter sp. GAI101]
 gi|214044957|gb|EEB85595.1| tRNA-specific adenosine deaminase [Roseobacter sp. GAI101]
          Length = 151

 Score =  178 bits (454), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 75/144 (52%), Positives = 99/144 (68%), Gaps = 1/144 (0%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           FM+ ALEEA++AA R E+PVGA  V    ++++R+GNR REL D TAHAE+LAIR  C  
Sbjct: 6   FMNIALEEARDAAERGEVPVGAAVVSPQGQVVARSGNRTRELNDPTAHAEVLAIRAACAA 65

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
              E L    LYVTLEPC MCA AIS AR+  LYYGAS+PK GG+  G + ++   CHH 
Sbjct: 66  AGSERLGGYALYVTLEPCAMCAGAISAARVATLYYGASDPKSGGVAQGARVFSHPQCHHV 125

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
           PE+Y GI+  ++  +++DFF  +R
Sbjct: 126 PEVYDGIATAQAEVLLKDFFGGKR 149


>gi|62389126|ref|YP_224528.1| cytosine deaminase [Corynebacterium glutamicum ATCC 13032]
 gi|41324459|emb|CAF18799.1| PUTATIVE CYTOSINE DEAMINASE [Corynebacterium glutamicum ATCC 13032]
          Length = 143

 Score =  178 bits (454), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 51/144 (35%), Positives = 73/144 (50%), Gaps = 3/144 (2%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  AL+ A+      ++PVGAV      +I++ A NR    +D TAHAEI+A+R   R  
Sbjct: 1   MRHALDIARQ-TPEGDVPVGAVIYAPTGEILATATNRREADRDPTAHAEIIALRRAARRF 59

Query: 67  SQ-EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           S    L +    VTLEPC+MCA A+  ARI R+ +GA  P+ G   +           H 
Sbjct: 60  SDGWRLSDCTAVVTLEPCSMCAGALVGARIGRIVFGAFEPRTGACGSVFDVVRDPAVLHK 119

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
            E+  GI E     ++ +FF+  R
Sbjct: 120 VEVSGGILEPECAALMTEFFELHR 143


>gi|74317234|ref|YP_314974.1| tRNA-adenosine deaminase [Thiobacillus denitrificans ATCC 25259]
 gi|74056729|gb|AAZ97169.1| probable cytosine/adenosine deaminases [Thiobacillus denitrificans
           ATCC 25259]
          Length = 151

 Score =  178 bits (454), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 47/126 (37%), Positives = 62/126 (49%)

Query: 24  IPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83
           +PVGA+ V   +I+ R  NR     D TAHAE++A+R     L    L    LYVT+EPC
Sbjct: 17  VPVGALVVCGGEIVGRGYNRPISSFDPTAHAEVMALRDAAARLGNYRLVGCTLYVTMEPC 76

Query: 84  TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQD 143
            MCA AI  ARI R+ YGA   K G   +    +     +   E+  G+        I  
Sbjct: 77  VMCAGAILHARIARVVYGAREYKTGAHGSIVDVFAEPRLNFHCEVEGGVLADECAATISG 136

Query: 144 FFKERR 149
           FF+ RR
Sbjct: 137 FFEARR 142


>gi|148284933|ref|YP_001249023.1| cytosine deaminase [Orientia tsutsugamushi str. Boryong]
 gi|146740372|emb|CAM80811.1| cytosine deaminase [Orientia tsutsugamushi str. Boryong]
          Length = 155

 Score =  178 bits (454), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 63/145 (43%), Positives = 90/145 (62%), Gaps = 2/145 (1%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           FM  A+E+A  A    E+PVG V V      +++RA N+     + T HAEI+AI   C 
Sbjct: 2   FMLQAIEQASQAFNLGEVPVGVVIVNRATKTVLTRAYNKVETTLNPTFHAEIIAINKACS 61

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
           +LS + L   D+YV+LEPC MCAAA+S  RI R+++GA + K G IENG + +   T ++
Sbjct: 62  LLSCKYLHGYDIYVSLEPCAMCAAALSHVRIDRIFFGAYDEKFGAIENGVRLFYNTTVYY 121

Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149
            PEIY GI E +S++++Q FF   R
Sbjct: 122 KPEIYGGIMELQSKELLQKFFSNLR 146


>gi|323358758|ref|YP_004225154.1| cytosine/adenosine deaminase [Microbacterium testaceum StLB037]
 gi|323275129|dbj|BAJ75274.1| cytosine/adenosine deaminase [Microbacterium testaceum StLB037]
          Length = 183

 Score =  178 bits (454), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 43/130 (33%), Positives = 62/130 (47%), Gaps = 1/130 (0%)

Query: 21  RNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVT 79
             ++PVGAV V  +  +     N      D TAHAE++A+R     L    L    L VT
Sbjct: 51  EGDVPVGAVVVDASGTVRGEGRNLREATHDPTAHAEVVALRRAAESLGTWHLAGCTLVVT 110

Query: 80  LEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139
           LEPC MCA A+  AR+ R+ +GA + K G   +           H  E+  G++E  +  
Sbjct: 111 LEPCVMCAGAVLQARVPRVVFGAWDAKAGAAGSMYDVLRDRRLPHRVEVVGGVAEGEAST 170

Query: 140 IIQDFFKERR 149
            ++ FF  RR
Sbjct: 171 RLRAFFDVRR 180


>gi|315657779|ref|ZP_07910659.1| cytidine/deoxycytidylate deaminase [Mobiluncus curtisii subsp.
           holmesii ATCC 35242]
 gi|315491576|gb|EFU81187.1| cytidine/deoxycytidylate deaminase [Mobiluncus curtisii subsp.
           holmesii ATCC 35242]
          Length = 180

 Score =  178 bits (453), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 54/144 (37%), Positives = 75/144 (52%), Gaps = 2/144 (1%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISR-AGNRN-RELKDVTAHAEILAIRMGCRI 65
           +  A   AQ A    +IPVGAV +    I++    N+      D +AHAEI+A+R     
Sbjct: 37  LDTAYRLAQKAGRAGDIPVGAVVLTPEGIVAGLGLNQRENPPYDPSAHAEIVALREAAGR 96

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           L +  L    L  TLEPCTMCA AI  ARI RL +GA +PK G   +       +  +H 
Sbjct: 97  LERWNLKGCTLVATLEPCTMCAGAIVNARISRLIFGAWDPKAGACGSIRDVVRDSRLNHQ 156

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
            E+  G+ E R + +++ FF ERR
Sbjct: 157 VEVKGGVDEPRVKALLKAFFGERR 180


>gi|296533928|ref|ZP_06896452.1| cytosine deaminase [Roseomonas cervicalis ATCC 49957]
 gi|296265745|gb|EFH11846.1| cytosine deaminase [Roseomonas cervicalis ATCC 49957]
          Length = 147

 Score =  178 bits (453), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 65/142 (45%), Positives = 90/142 (63%), Gaps = 1/142 (0%)

Query: 9   SCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
             AL+EA++AA R E+PVGAV      +++ RAGNR  +  D +AHAE+LA+R     L 
Sbjct: 5   EIALQEARDAAARGEVPVGAVVTDAAGRVLGRAGNRVEQDHDASAHAEMLALRQAAAALG 64

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
              LP   L VTLEPC MCA A S  RIRR+ +GA +PKGGG+E+G + Y   +CHH+PE
Sbjct: 65  SPRLPGCTLTVTLEPCPMCAQAASFFRIRRVVFGAYDPKGGGVEHGARIYAAPSCHHAPE 124

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
           +  G+ E     ++++FF   R
Sbjct: 125 VVGGVREGECATLLREFFAALR 146


>gi|312200616|ref|YP_004020677.1| CMP/dCMP deaminase zinc-binding protein [Frankia sp. EuI1c]
 gi|311231952|gb|ADP84807.1| CMP/dCMP deaminase zinc-binding protein [Frankia sp. EuI1c]
          Length = 198

 Score =  178 bits (453), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 45/129 (34%), Positives = 67/129 (51%), Gaps = 1/129 (0%)

Query: 22  NEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80
            ++P+GAV +  +  ++ R  N      D T HAEI+A+R     + +  L    L VTL
Sbjct: 60  GDVPIGAVVIGADGTVLGRGHNIREVAADPTGHAEIVALRAAATAVGEWRLTGATLVVTL 119

Query: 81  EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140
           EPCTMCA A+ LAR+ RL YGA + K G + +          +H PE+  G++      +
Sbjct: 120 EPCTMCAGALVLARVDRLVYGAIDEKAGAVGSLWDVVRDRRLNHRPEVITGVAAPDCTAL 179

Query: 141 IQDFFKERR 149
           +  FF  RR
Sbjct: 180 LDTFFASRR 188


>gi|121609574|ref|YP_997381.1| CMP/dCMP deaminase [Verminephrobacter eiseniae EF01-2]
 gi|121554214|gb|ABM58363.1| CMP/dCMP deaminase, zinc-binding [Verminephrobacter eiseniae
           EF01-2]
          Length = 482

 Score =  178 bits (453), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 50/132 (37%), Positives = 72/132 (54%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
              +M  AL +A++AA   E+PVGAV V + ++I+   N      D +AHAEILA+R   
Sbjct: 30  DAHWMRQALAQAEDAARAGEVPVGAVVVKDGQLIATGRNAPLARHDPSAHAEILALRAAA 89

Query: 64  RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123
           R L    L    LYVTLEPC MC+ A+  AR+ RL YGA++P+ G   +    +  A  +
Sbjct: 90  RRLGNYRLDGCSLYVTLEPCAMCSGALLQARLARLVYGAADPRTGAAGSVLDLFGDARLN 149

Query: 124 HSPEIYPGISEQ 135
           H   +  G+   
Sbjct: 150 HQTRVQGGVLAD 161


>gi|72160431|ref|YP_288088.1| tRNA-adenosine deaminase [Thermobifida fusca YX]
 gi|71914163|gb|AAZ54065.1| tRNA-adenosine deaminase [Thermobifida fusca YX]
          Length = 150

 Score =  178 bits (453), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 56/148 (37%), Positives = 74/148 (50%), Gaps = 6/148 (4%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  ALEEA+  +   ++PVGAV +  +  +I    N      D TAHAE+LA+R   R L
Sbjct: 1   MRRALEEAEKTSSSGDVPVGAVVLDPDGVVIGAGHNEREATGDPTAHAEVLALRAAARRL 60

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L    L VTLEPCTMCA AI LARI RL YGA + + G + +          +H P
Sbjct: 61  GSWRLSGCTLAVTLEPCTMCAGAIVLARIERLIYGARDERAGAVGSLWDVVRDRRLNHRP 120

Query: 127 EIYPGISEQ-----RSRQIIQDFFKERR 149
           E+ P             +++ DFF   R
Sbjct: 121 EVIPPDLVDPELSAACSRLLTDFFARHR 148


>gi|154487580|ref|ZP_02028987.1| hypothetical protein BIFADO_01437 [Bifidobacterium adolescentis
           L2-32]
 gi|154083709|gb|EDN82754.1| hypothetical protein BIFADO_01437 [Bifidobacterium adolescentis
           L2-32]
          Length = 149

 Score =  178 bits (453), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 43/129 (33%), Positives = 61/129 (47%), Gaps = 1/129 (0%)

Query: 22  NEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80
            E+PVGAV +  + + I R  N      D  AHAE+ A+R     L    L +  L VTL
Sbjct: 21  GEVPVGAVVLDADGRAIGRGRNLRETHADPLAHAEVQAMREAAASLGTWNLADCTLVVTL 80

Query: 81  EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140
           EPC MCA A     + R+ +GA + K G   +             PE+  G+ E    ++
Sbjct: 81  EPCPMCAGACLQTHVGRIVFGAWDAKLGACGSVWDIPRDPHVGPVPEVVGGVCEAECGRL 140

Query: 141 IQDFFKERR 149
           + DFF +RR
Sbjct: 141 MTDFFADRR 149


>gi|77736501|ref|NP_001029952.1| tRNA-specific adenosine deaminase 2 [Bos taurus]
 gi|75057795|sp|Q5E9J7|ADAT2_BOVIN RecName: Full=tRNA-specific adenosine deaminase 2; AltName:
           Full=Deaminase domain-containing protein 1; AltName:
           Full=tRNA-specific adenosine-34 deaminase subunit ADAT2
 gi|59858211|gb|AAX08940.1| deaminase domain containing 1 [Bos taurus]
 gi|296483948|gb|DAA26063.1| tRNA-specific adenosine deaminase 2 [Bos taurus]
          Length = 191

 Score =  178 bits (452), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 45/154 (29%), Positives = 78/154 (50%), Gaps = 8/154 (5%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           ++   +M  A++ A++A    E+PVG + V NN+++ +  N   + K+ T HAE++AI  
Sbjct: 20  EETEKWMEQAMQMAKDALDNTEVPVGCLMVYNNEVVGKGRNEVNQTKNATRHAEMVAIDQ 79

Query: 62  GCRIL------SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
                        E+     LYVT+EPC MCAAA+ L RI  + YG  N + GG  +   
Sbjct: 80  ALDWCRRRGRSPSEVFEHTVLYVTVEPCIMCAAALRLMRIPLVVYGCQNERFGGCGSVLD 139

Query: 116 F--YTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
                L +     +  PG   + + ++++ F+K+
Sbjct: 140 IASADLPSTGKPFQCTPGYRAEEAVEMLKTFYKQ 173


>gi|325191115|emb|CCA25601.1| SUMO ligase putative [Albugo laibachii Nc14]
          Length = 1298

 Score =  178 bits (452), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 55/149 (36%), Positives = 80/149 (53%), Gaps = 3/149 (2%)

Query: 2    KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
             K   FM  ALEEA+ A +R E+PVG VAV  N+IIS A NR  EL + T HAE++AI  
Sbjct: 1111 NKDVGFMREALEEAERALVRGEVPVGCVAVYQNQIISFASNRTNELCNATKHAELVAIDY 1170

Query: 62   GCRILSQEI--LPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
                 +       E   YVT EPC MCAAA+   ++ R+ +G  N + GG  +    +  
Sbjct: 1171 IVSNYNNTRAIFQETTFYVTCEPCIMCAAALLQCKVVRVVFGCQNFRFGGCGSVLSLHEP 1230

Query: 120  -ATCHHSPEIYPGISEQRSRQIIQDFFKE 147
             A    +   +PGI    + +++Q F+++
Sbjct: 1231 TANIPRTFSCHPGILRIEAIELLQRFYEQ 1259


>gi|325191114|emb|CCA25600.1| SUMO ligase putative [Albugo laibachii Nc14]
          Length = 1287

 Score =  178 bits (452), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 55/149 (36%), Positives = 80/149 (53%), Gaps = 3/149 (2%)

Query: 2    KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
             K   FM  ALEEA+ A +R E+PVG VAV  N+IIS A NR  EL + T HAE++AI  
Sbjct: 1100 NKDVGFMREALEEAERALVRGEVPVGCVAVYQNQIISFASNRTNELCNATKHAELVAIDY 1159

Query: 62   GCRILSQEI--LPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
                 +       E   YVT EPC MCAAA+   ++ R+ +G  N + GG  +    +  
Sbjct: 1160 IVSNYNNTRAIFQETTFYVTCEPCIMCAAALLQCKVVRVVFGCQNFRFGGCGSVLSLHEP 1219

Query: 120  -ATCHHSPEIYPGISEQRSRQIIQDFFKE 147
             A    +   +PGI    + +++Q F+++
Sbjct: 1220 TANIPRTFSCHPGILRIEAIELLQRFYEQ 1248


>gi|325191111|emb|CCA25597.1| SUMO ligase putative [Albugo laibachii Nc14]
          Length = 1290

 Score =  178 bits (452), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 55/149 (36%), Positives = 80/149 (53%), Gaps = 3/149 (2%)

Query: 2    KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
             K   FM  ALEEA+ A +R E+PVG VAV  N+IIS A NR  EL + T HAE++AI  
Sbjct: 1103 NKDVGFMREALEEAERALVRGEVPVGCVAVYQNQIISFASNRTNELCNATKHAELVAIDY 1162

Query: 62   GCRILSQEI--LPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
                 +       E   YVT EPC MCAAA+   ++ R+ +G  N + GG  +    +  
Sbjct: 1163 IVSNYNNTRAIFQETTFYVTCEPCIMCAAALLQCKVVRVVFGCQNFRFGGCGSVLSLHEP 1222

Query: 120  -ATCHHSPEIYPGISEQRSRQIIQDFFKE 147
             A    +   +PGI    + +++Q F+++
Sbjct: 1223 TANIPRTFSCHPGILRIEAIELLQRFYEQ 1251


>gi|325191110|emb|CCA25596.1| SUMO ligase putative [Albugo laibachii Nc14]
          Length = 1279

 Score =  178 bits (452), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 55/149 (36%), Positives = 80/149 (53%), Gaps = 3/149 (2%)

Query: 2    KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
             K   FM  ALEEA+ A +R E+PVG VAV  N+IIS A NR  EL + T HAE++AI  
Sbjct: 1092 NKDVGFMREALEEAERALVRGEVPVGCVAVYQNQIISFASNRTNELCNATKHAELVAIDY 1151

Query: 62   GCRILSQEI--LPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
                 +       E   YVT EPC MCAAA+   ++ R+ +G  N + GG  +    +  
Sbjct: 1152 IVSNYNNTRAIFQETTFYVTCEPCIMCAAALLQCKVVRVVFGCQNFRFGGCGSVLSLHEP 1211

Query: 120  -ATCHHSPEIYPGISEQRSRQIIQDFFKE 147
             A    +   +PGI    + +++Q F+++
Sbjct: 1212 TANIPRTFSCHPGILRIEAIELLQRFYEQ 1240


>gi|325191109|emb|CCA25595.1| SUMO ligase putative [Albugo laibachii Nc14]
          Length = 1295

 Score =  178 bits (452), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 55/149 (36%), Positives = 80/149 (53%), Gaps = 3/149 (2%)

Query: 2    KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
             K   FM  ALEEA+ A +R E+PVG VAV  N+IIS A NR  EL + T HAE++AI  
Sbjct: 1108 NKDVGFMREALEEAERALVRGEVPVGCVAVYQNQIISFASNRTNELCNATKHAELVAIDY 1167

Query: 62   GCRILSQEI--LPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
                 +       E   YVT EPC MCAAA+   ++ R+ +G  N + GG  +    +  
Sbjct: 1168 IVSNYNNTRAIFQETTFYVTCEPCIMCAAALLQCKVVRVVFGCQNFRFGGCGSVLSLHEP 1227

Query: 120  -ATCHHSPEIYPGISEQRSRQIIQDFFKE 147
             A    +   +PGI    + +++Q F+++
Sbjct: 1228 TANIPRTFSCHPGILRIEAIELLQRFYEQ 1256


>gi|218885276|ref|YP_002434597.1| CMP/dCMP deaminase zinc-binding [Desulfovibrio vulgaris str.
           'Miyazaki F']
 gi|218756230|gb|ACL07129.1| CMP/dCMP deaminase zinc-binding [Desulfovibrio vulgaris str.
           'Miyazaki F']
          Length = 175

 Score =  178 bits (452), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 45/130 (34%), Positives = 64/130 (49%), Gaps = 1/130 (0%)

Query: 21  RNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVT 79
           + E+PVGAV V    +II    N      D +AHAE++A+R  CR      L    L VT
Sbjct: 46  QGEVPVGAVVVDRQGRIIGTGHNTPVASHDPSAHAEMVALREACRNTGNYRLDGAVLVVT 105

Query: 80  LEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139
           LEPC MCA A+  AR+  + YGA + K G + +          +H       +       
Sbjct: 106 LEPCLMCAGAMVHARVAGVVYGAPDLKAGAVTSCLDALDQPFHNHRVWHMGHVRAAECGA 165

Query: 140 IIQDFFKERR 149
           ++Q+FF+ERR
Sbjct: 166 LLQEFFRERR 175


>gi|94986787|ref|YP_594720.1| cytosine/adenosine deaminases [Lawsonia intracellularis PHE/MN1-00]
 gi|94731036|emb|CAJ54399.1| Cytosine/adenosine deaminases [Lawsonia intracellularis PHE/MN1-00]
          Length = 162

 Score =  178 bits (452), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 55/143 (38%), Positives = 73/143 (51%), Gaps = 1/143 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  AL EA     +NE+PVGA+ V  N KII +  N      D TAHAEILA+R    + 
Sbjct: 19  MDEALIEANQCTKKNEVPVGAIIVHKNGKIIGKGHNAPITTSDPTAHAEILALRTAGAVQ 78

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L +  L VTLEPC MC  AI  ARI  + YGA+    G I +    + L   ++ P
Sbjct: 79  QNYRLQDCFLIVTLEPCLMCVGAIIQARIDGIVYGAAELNTGSITSCIAGFDLPFNNYKP 138

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
               GI   +  Q++ +FF + R
Sbjct: 139 WHMGGIKATQCSQLLHNFFYKLR 161


>gi|296392969|ref|YP_003657853.1| CMP/dCMP deaminase zinc-binding protein [Segniliparus rotundus DSM
           44985]
 gi|296180116|gb|ADG97022.1| CMP/dCMP deaminase zinc-binding protein [Segniliparus rotundus DSM
           44985]
          Length = 180

 Score =  178 bits (452), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 51/129 (39%), Positives = 70/129 (54%), Gaps = 2/129 (1%)

Query: 23  EIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQ-EILPEVDLYVTL 80
           ++PVGAV    + K ++RA N      D TAHAEILA+R    IL     L    L VTL
Sbjct: 37  DVPVGAVVFGPDGKELARAANAREAFGDPTAHAEILALRQAAAILGDGWRLIGCTLAVTL 96

Query: 81  EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140
           EPCTMCA A   ARI R+ +GA  PK G + +     T    +H P++  G+ E    ++
Sbjct: 97  EPCTMCAGAAVNARIARIVFGAREPKTGAVGSLWDVVTDPRLNHRPQVRSGVLEAECAEL 156

Query: 141 IQDFFKERR 149
            + FF++ R
Sbjct: 157 TRSFFRKLR 165


>gi|15616866|ref|NP_240079.1| hypothetical protein BU255 [Buchnera aphidicola str. APS
           (Acyrthosiphon pisum)]
 gi|219682178|ref|YP_002468562.1| tRNA-specific adenosine deaminase monomer (YfhC) [Buchnera
           aphidicola str. Tuc7 (Acyrthosiphon pisum)]
 gi|14286004|sp|P57343|Y255_BUCAI RecName: Full=Uncharacterized protein BU255
 gi|25303863|pir||E84959 hypothetical protein yfhC [imported] - Buchnera sp. (strain APS)
 gi|10038930|dbj|BAB12965.1| hypothetical protein yfhC [Buchnera aphidicola str. APS
           (Acyrthosiphon pisum)]
 gi|219621911|gb|ACL30067.1| tRNA-specific adenosine deaminase monomer (YfhC) [Buchnera
           aphidicola str. Tuc7 (Acyrthosiphon pisum)]
 gi|311086568|gb|ADP66649.1| tRNA-specific adenosine deaminase monomer (YfhC) [Buchnera
           aphidicola str. TLW03 (Acyrthosiphon pisum)]
 gi|311087149|gb|ADP67229.1| tRNA-specific adenosine deaminase monomer (YfhC) [Buchnera
           aphidicola str. JF99 (Acyrthosiphon pisum)]
 gi|311087683|gb|ADP67762.1| tRNA-specific adenosine deaminase monomer (YfhC) [Buchnera
           aphidicola str. JF98 (Acyrthosiphon pisum)]
          Length = 161

 Score =  178 bits (452), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 48/152 (31%), Positives = 78/152 (51%), Gaps = 8/152 (5%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           +K   +M  AL+ A  A  + EIP+GA+ V   +II    N +    D TAHAEI+A+R 
Sbjct: 4   EKDKNWMKIALKYAYYAKEKGEIPIGAILVFKERIIGIGWNSSISKNDPTAHAEIIALRG 63

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGA----SNPKGGGIENGTQFY 117
             + +    L    LYVTL+PC MC  AI  +RI+RL +GA    S+ +     +    +
Sbjct: 64  AGKKIKNYRLLNTTLYVTLQPCIMCCGAIIQSRIKRLVFGANCNSSDHRF----SLKNLF 119

Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
                 +  +I   + ++    I+ +FF+++R
Sbjct: 120 CDPQKDYKLDIKKNVMQRECSDILINFFQKKR 151


>gi|146321900|ref|YP_001201611.1| cytosine/adenosine deaminase [Streptococcus suis 98HAH33]
 gi|145692706|gb|ABP93211.1| Cytosine/adenosine deaminase [Streptococcus suis 98HAH33]
          Length = 141

 Score =  178 bits (452), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 45/120 (37%), Positives = 65/120 (54%)

Query: 30  AVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAA 89
            V + +II R  N   EL     HAE++AI+    +     L +  L+VT+EPC MC+ A
Sbjct: 2   IVKDGQIIGRGHNAREELNQAIMHAEVMAIQEANNVEGNWRLLDSTLFVTIEPCVMCSGA 61

Query: 90  ISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
           I LARI ++ YGA+N K G   +     T    +H  ++  GI E     I+QDFF++RR
Sbjct: 62  IGLARIPQVIYGATNKKFGAAGSLYDILTDERLNHRVKVETGILEAECANIMQDFFRQRR 121


>gi|170746522|ref|YP_001752782.1| CMP/dCMP deaminase zinc-binding [Methylobacterium radiotolerans JCM
           2831]
 gi|170653044|gb|ACB22099.1| CMP/dCMP deaminase zinc-binding [Methylobacterium radiotolerans JCM
           2831]
          Length = 162

 Score =  178 bits (452), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 68/115 (59%), Positives = 82/115 (71%)

Query: 22  NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81
            E+PVGA  V +  +++ A NR REL D TAHAEILAIR  C  L  E L   DLYVTLE
Sbjct: 34  GEVPVGAAVVRDGTVLAVAHNRPRELHDPTAHAEILAIRAACATLGTERLVGCDLYVTLE 93

Query: 82  PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQR 136
           PC MCA AIS ARIRRLYYGA++PKGGG+E+G + +   TCHH+PE+Y G  E+ 
Sbjct: 94  PCPMCAGAISFARIRRLYYGAADPKGGGVEHGPRVFDQPTCHHAPEVYGGFRERE 148


>gi|162450858|ref|YP_001613225.1| putative zinc-binding hydrolase [Sorangium cellulosum 'So ce 56']
 gi|161161440|emb|CAN92745.1| putative zinc-binding hydrolase [Sorangium cellulosum 'So ce 56']
          Length = 177

 Score =  178 bits (452), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 50/147 (34%), Positives = 73/147 (49%), Gaps = 1/147 (0%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMG 62
              +M  AL EA+ AA   ++PVGA+ V     +++R  NR    +D T HAE+ A+R  
Sbjct: 25  DARWMREALAEAEAAAGAGDVPVGALVVDAAGTVLARGRNRREIDQDPTGHAEVDALRAA 84

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
            R L    L    +Y TLEPC MCA A+  ARI RL YG  +PK G ++           
Sbjct: 85  ARRLGHWRLEGATVYATLEPCPMCAGALVNARIARLVYGCPDPKAGAVDTLFAIGRDNRL 144

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H   +  G+       +++ FF + R
Sbjct: 145 NHRFAVTSGVLADECAGVLRAFFAKLR 171


>gi|319784273|ref|YP_004143749.1| CMP/dCMP deaminase zinc-binding protein [Mesorhizobium ciceri
           biovar biserrulae WSM1271]
 gi|317170161|gb|ADV13699.1| CMP/dCMP deaminase zinc-binding protein [Mesorhizobium ciceri
           biovar biserrulae WSM1271]
          Length = 149

 Score =  178 bits (452), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 73/129 (56%), Positives = 93/129 (72%)

Query: 21  RNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80
           R E+PVGAV      +++ AGNR REL D TAHAE+L IR  CR LS E L   DLYVTL
Sbjct: 20  RGEVPVGAVIANGAGVVASAGNRTRELADPTAHAEMLVIREACRKLSAERLTGHDLYVTL 79

Query: 81  EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140
           EPC MCA AIS AR+RRLY+GA++ KGG + NG +F+   TCHH+P+IYPG+ E  +  +
Sbjct: 80  EPCAMCAGAISFARLRRLYFGAADDKGGAVVNGVRFFASPTCHHAPDIYPGMGETEAGLL 139

Query: 141 IQDFFKERR 149
           ++ FF+ERR
Sbjct: 140 LKGFFRERR 148


>gi|172041612|ref|YP_001801326.1| putative cytosine/adenosine deaminase [Corynebacterium urealyticum
           DSM 7109]
 gi|171852916|emb|CAQ05892.1| putative cytosine/adenosine deaminase [Corynebacterium urealyticum
           DSM 7109]
          Length = 198

 Score =  178 bits (452), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 48/148 (32%), Positives = 74/148 (50%), Gaps = 4/148 (2%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMG 62
               M  A++ A  +    ++PVGA+ V  +  +++ A NR  +  D  AHAE+LA+R  
Sbjct: 53  DEELMRQAIDVA-CSTPPGDVPVGALVVDADGTVLATATNRREQDADPLAHAEVLALRQA 111

Query: 63  CRILSQ-EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
            R L     L    L VTLEPC MCA A   AR+ R+ +GA  P+ G   +       A 
Sbjct: 112 VRALGDSWRLERCTLVVTLEPCAMCAGAALGARVGRIVFGAYEPRTGACGSVWDLPREAL 171

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
             H  E+  G+ +    Q+++ FF++ R
Sbjct: 172 L-HKAEVRGGVLQPECEQLLRGFFEKLR 198


>gi|145592768|ref|YP_001157065.1| CMP/dCMP deaminase, zinc-binding [Salinispora tropica CNB-440]
 gi|145302105|gb|ABP52687.1| tRNA-adenosine deaminase [Salinispora tropica CNB-440]
          Length = 153

 Score =  177 bits (451), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 51/153 (33%), Positives = 74/153 (48%), Gaps = 14/153 (9%)

Query: 8   MSCALEEAQNAAL-------------RNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAH 53
           M  ALE A   A               ++IPVGA+ +  +   ++   N      D TAH
Sbjct: 1   MRRALEVAVTGAETTITAADDIPVPAADDIPVGALLLGPDGAELATGRNERELTGDPTAH 60

Query: 54  AEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENG 113
           AE+LA+R     L +  L    L VTLEPCTMCA A+ LAR+  + +GA  PK G   + 
Sbjct: 61  AEVLALRRAAGRLGRWRLDGCTLVVTLEPCTMCAGALVLARVSTVVFGAWEPKTGAAGSL 120

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
                    +H PE+Y G+ E  +  +++ FF+
Sbjct: 121 WDVLRDRRLNHRPEVYGGVLETETAAVLRAFFR 153


>gi|298345726|ref|YP_003718413.1| nucleoside deaminase [Mobiluncus curtisii ATCC 43063]
 gi|298235787|gb|ADI66919.1| nucleoside deaminase [Mobiluncus curtisii ATCC 43063]
          Length = 180

 Score =  177 bits (451), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 54/144 (37%), Positives = 75/144 (52%), Gaps = 2/144 (1%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISR-AGNRN-RELKDVTAHAEILAIRMGCRI 65
           +  A   AQ A    +IPVGAV +    I++    N+      D +AHAEI+A+R     
Sbjct: 37  LDTAYGLAQKAGRAGDIPVGAVVLTPEGIVAGLGLNQRENPPYDPSAHAEIVALREAAGR 96

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           L +  L    L  TLEPCTMCA AI  ARI RL +GA +PK G   +       +  +H 
Sbjct: 97  LERWNLKGCTLVATLEPCTMCAGAIVNARISRLIFGAWDPKAGACGSIRDVVRDSRLNHQ 156

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
            E+  G+ E R + +++ FF ERR
Sbjct: 157 VEVKGGVDEPRIKALLKAFFGERR 180


>gi|21672527|ref|NP_660594.1| hypothetical protein BUsg246 [Buchnera aphidicola str. Sg
           (Schizaphis graminum)]
 gi|25091621|sp|Q8K9R4|Y246_BUCAP RecName: Full=Uncharacterized protein BUsg_246
 gi|21623150|gb|AAM67805.1| hypothetical 20.0 kDa protein [Buchnera aphidicola str. Sg
           (Schizaphis graminum)]
          Length = 151

 Score =  177 bits (451), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 50/148 (33%), Positives = 72/148 (48%), Gaps = 1/148 (0%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
            + + +M  AL+ A  A    E+P+GA+ V   KII    N      D TAHAEI+A+R 
Sbjct: 4   NRDSYWMKIALKYAYYAEENGEVPIGAILVFQEKIIGTGWNSVISQNDSTAHAEIIALRE 63

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
             R +    L    LYVTL+PC MC  AI  +RI+RL +GAS           + +    
Sbjct: 64  AGRNIKNYRLVNTTLYVTLQPCMMCCGAIINSRIKRLVFGASYKDLKKNPFLKKIFINLE 123

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +   +I   I      +I+ +FFK +R
Sbjct: 124 KN-KLKIKKHIMRNECAKILSNFFKNKR 150


>gi|300790762|ref|YP_003771053.1| cytidine and deoxycytidylate deaminase family protein
           [Amycolatopsis mediterranei U32]
 gi|299800276|gb|ADJ50651.1| cytidine and deoxycytidylate deaminase family protein
           [Amycolatopsis mediterranei U32]
          Length = 142

 Score =  177 bits (451), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 54/144 (37%), Positives = 78/144 (54%), Gaps = 4/144 (2%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKI-ISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  ALE A+      ++P+GAV    + + ++ A N   EL D TAHAEILA+R   +++
Sbjct: 1   MEAALEAARAPGA--DVPIGAVVFGPDGVPLAAARNARIELGDPTAHAEILALRAAAQVV 58

Query: 67  SQ-EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
                L    L VTLEPCTMCA A+ LARI RL +GA  PK G + +          +H 
Sbjct: 59  GDGWRLEGCTLAVTLEPCTMCAGALVLARIARLVFGAWEPKTGAVGSLWDVVRDRRLNHR 118

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
           PE++ G+       +++ +F  RR
Sbjct: 119 PEVHGGVLLDECAGLLETYFAMRR 142


>gi|318062198|ref|ZP_07980919.1| cytidine/deoxycytidine deaminase [Streptomyces sp. SA3_actG]
 gi|318079391|ref|ZP_07986723.1| cytidine/deoxycytidine deaminase [Streptomyces sp. SA3_actF]
          Length = 163

 Score =  177 bits (451), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 46/129 (35%), Positives = 66/129 (51%), Gaps = 1/129 (0%)

Query: 22  NEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80
            EIPVGAV +  +   ++RA N      D TAHAE+LA+R    +  +  L    L VTL
Sbjct: 35  GEIPVGAVVLDASGTELARARNEREATHDPTAHAEVLALRRAAAVRGEWRLTGCTLVVTL 94

Query: 81  EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140
           EPC MCA A++ +R+ R+ YGA +PK G   +          +H  E+  G+    S  +
Sbjct: 95  EPCPMCAGALTQSRVERVVYGARDPKAGAAGSQWDLLRDRRLNHRAEVVEGVLAPESTAL 154

Query: 141 IQDFFKERR 149
           +  FF   R
Sbjct: 155 LDAFFTATR 163


>gi|332982859|ref|YP_004464300.1| tRNA-adenosine deaminase [Mahella australiensis 50-1 BON]
 gi|332700537|gb|AEE97478.1| tRNA-adenosine deaminase [Mahella australiensis 50-1 BON]
          Length = 156

 Score =  177 bits (451), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 50/126 (39%), Positives = 68/126 (53%)

Query: 24  IPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83
           +P+GAV    ++II R  N+   L D TAHAE+LAIR     ++   L   +LY TLEPC
Sbjct: 28  VPIGAVVAKGDEIIGRGHNQVEGLHDATAHAEMLAIRQAMAAINDWRLDGCELYTTLEPC 87

Query: 84  TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQD 143
            MC  A+ L RI +L YGA + K G                + EI  GI EQR  ++++ 
Sbjct: 88  AMCTGAMMLCRIEQLIYGAPDLKWGCAGTLYNLPRDRRFDRNIEIIAGIGEQRCEEMLKK 147

Query: 144 FFKERR 149
           FF+ RR
Sbjct: 148 FFENRR 153


>gi|300857552|ref|YP_003782535.1| hypothetical protein cpfrc_00135 [Corynebacterium
           pseudotuberculosis FRC41]
 gi|300685006|gb|ADK27928.1| hypothetical protein cpfrc_00135 [Corynebacterium
           pseudotuberculosis FRC41]
 gi|308275531|gb|ADO25430.1| Cytosine/adenosine deaminase [Corynebacterium pseudotuberculosis
           I19]
          Length = 167

 Score =  177 bits (451), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 52/144 (36%), Positives = 72/144 (50%), Gaps = 3/144 (2%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMG-CRI 65
           M  A+ +AQ A    +IPVGAV    + +++ R  NR    +D   HAEI+AIR      
Sbjct: 25  MRQAIIQAQ-ATPPGDIPVGAVIFGPDGEVLGRGVNRREADRDPLGHAEIMAIREAVANH 83

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
                L +  L VTLEPCTMCA A+  ARI R+++GA  PK G   +           H 
Sbjct: 84  DDGWRLTDCTLAVTLEPCTMCAGALVGARIGRIFFGAYEPKTGACGSAFDVVRDPAVLHV 143

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
           PE+  GI +     ++  FF+  R
Sbjct: 144 PEVRGGILQDECAALVTHFFEGLR 167


>gi|257138794|ref|ZP_05587056.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia
           thailandensis E264]
          Length = 187

 Score =  177 bits (450), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 54/148 (36%), Positives = 79/148 (53%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           ++   +M  AL  A+ A    E+PVGAV V  +++I+R  N      D +AHAE+ A+R 
Sbjct: 20  ERDRRYMRIALAAAEEARAAGEVPVGAVIVRGDEVIARGFNHPIGGHDPSAHAEMAALRA 79

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
             R L    +P  +LYVTLEPC MC+ AI  ARI R+ +GA +PK G   +    +  A 
Sbjct: 80  AARALRNYRMPGCELYVTLEPCLMCSGAIMHARIARVVFGAPDPKTGACGSVVDAFADAR 139

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H   +  G+        ++ FF ERR
Sbjct: 140 LNHHTTVEGGVLADECGAALKSFFAERR 167


>gi|83719984|ref|YP_442586.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia
           thailandensis E264]
 gi|83653809|gb|ABC37872.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia
           thailandensis E264]
          Length = 194

 Score =  177 bits (450), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 54/148 (36%), Positives = 79/148 (53%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           ++   +M  AL  A+ A    E+PVGAV V  +++I+R  N      D +AHAE+ A+R 
Sbjct: 27  ERDRRYMRIALAAAEEARAAGEVPVGAVIVRGDEVIARGFNHPIGGHDPSAHAEMAALRA 86

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
             R L    +P  +LYVTLEPC MC+ AI  ARI R+ +GA +PK G   +    +  A 
Sbjct: 87  AARALRNYRMPGCELYVTLEPCLMCSGAIMHARIARVVFGAPDPKTGACGSVVDAFADAR 146

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H   +  G+        ++ FF ERR
Sbjct: 147 LNHHTTVEGGVLADECGAALKSFFAERR 174


>gi|242794450|ref|XP_002482376.1| cytosine deaminase, putative [Talaromyces stipitatus ATCC 10500]
 gi|218718964|gb|EED18384.1| cytosine deaminase, putative [Talaromyces stipitatus ATCC 10500]
          Length = 186

 Score =  177 bits (450), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 48/146 (32%), Positives = 73/146 (50%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           +    FM  AL   + A    E PVG V VLN KII    N      + T HAE LAI  
Sbjct: 17  QDQERFMKEALLMGEKALAVGETPVGCVLVLNGKIIGSGMNDTNRSMNGTRHAEFLAIEE 76

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
             +   + I  EVDLYVT+EPC MCA+ +    I R+++G +N + GG  +    ++  +
Sbjct: 77  ALQTYPRSIFREVDLYVTVEPCVMCASLLRQYNICRVFFGCANERFGGTGSVLSLHSDPS 136

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKE 147
                 +Y GI +  +  +++ F+ +
Sbjct: 137 IDPPYPVYGGIFKNDAIMLLRRFYIQ 162


>gi|167619629|ref|ZP_02388260.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia
           thailandensis Bt4]
          Length = 194

 Score =  177 bits (449), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 54/148 (36%), Positives = 79/148 (53%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           ++   +M  AL  A+ A    E+PVGAV V  +++I+R  N      D +AHAE+ A+R 
Sbjct: 27  ERDRRYMRIALAAAEEARAAGEVPVGAVIVRGDEVIARGFNHPIGGHDPSAHAEMAALRA 86

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
             R L    +P  +LYVTLEPC MC+ AI  ARI R+ +GA +PK G   +    +  A 
Sbjct: 87  AARALRNYRMPGCELYVTLEPCLMCSGAIMHARIARVVFGAPDPKTGACGSVVDAFADAR 146

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H   +  G+        ++ FF ERR
Sbjct: 147 LNHHTTVEGGVLADECGAALKSFFAERR 174


>gi|115727549|ref|XP_789050.2| PREDICTED: similar to deaminase domain containing 1
           [Strongylocentrotus purpuratus]
 gi|115955250|ref|XP_001190121.1| PREDICTED: similar to deaminase domain containing 1
           [Strongylocentrotus purpuratus]
          Length = 201

 Score =  177 bits (449), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 47/151 (31%), Positives = 75/151 (49%), Gaps = 8/151 (5%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
              +M+ A+  A+ A  R E+PVG + V  ++II   GN   E K+ T HAEILA+    
Sbjct: 9   DEKWMTEAVNMAKQALGRGEVPVGCLLVYEDQIIGTGGNAVNETKNATRHAEILALEEAM 68

Query: 64  RILSQEIL------PEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFY 117
           R    + L          L+VT+EPC MCA A+ +  I+++ YG  N + GG  +     
Sbjct: 69  RWCDDKQLEREEVFSRTKLFVTVEPCIMCAGALRIMGIKKVVYGCRNERFGGCGSILSVN 128

Query: 118 TL--ATCHHSPEIYPGISEQRSRQIIQDFFK 146
           +    +     E   G+    + Q++Q+F+K
Sbjct: 129 SDELPSIGEPFECKAGLYADTAVQLLQEFYK 159


>gi|332671974|ref|YP_004454982.1| CMP/dCMP deaminase zinc-binding protein [Cellulomonas fimi ATCC
           484]
 gi|332341012|gb|AEE47595.1| CMP/dCMP deaminase zinc-binding protein [Cellulomonas fimi ATCC
           484]
          Length = 171

 Score =  177 bits (449), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 47/150 (31%), Positives = 71/150 (47%), Gaps = 15/150 (10%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVL--------NNKIISRAGNRNRELKDVTAHAEILAI 59
           M  AL+EA+ A    ++                + ++++R  N    L D T HAE++A+
Sbjct: 20  MGLALDEARRAVQSGDV-------PVGAVVVGPSGEVVARGHNVREALDDPTGHAEVVAL 72

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
           R     L +  L +  L VTLEPC MCA AI LAR+ RL  GA +PK G   +       
Sbjct: 73  RAAADRLGRWRLDDCTLVVTLEPCLMCAGAIVLARVPRLVLGAWDPKAGACGSQWDVVRD 132

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
              +H  E+  G+       ++Q FF+ +R
Sbjct: 133 RRLNHRVEVVGGVRADECGLLLQHFFEAQR 162


>gi|219681621|ref|YP_002468007.1| hypothetical protein YfhC [Buchnera aphidicola str. 5A
           (Acyrthosiphon pisum)]
 gi|257471309|ref|ZP_05635308.1| hypothetical protein BaphL_01255 [Buchnera aphidicola str. LSR1
           (Acyrthosiphon pisum)]
 gi|219624464|gb|ACL30619.1| hypothetical protein YfhC [Buchnera aphidicola str. 5A
           (Acyrthosiphon pisum)]
          Length = 161

 Score =  177 bits (449), Expect = 7e-43,   Method: Composition-based stats.
 Identities = 48/152 (31%), Positives = 78/152 (51%), Gaps = 8/152 (5%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           +K   +M  AL+ A  A  + EIP+GA+ V   +II    N +    D TAHAEI+A+R 
Sbjct: 4   EKDKNWMKIALKYAYYAKEKGEIPIGAILVFKERIIGIGWNSSISKNDPTAHAEIIALRG 63

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGA----SNPKGGGIENGTQFY 117
             + +    L    LYVTL+PC MC  AI  +RI+RL +GA    S+ +     +    +
Sbjct: 64  AGKKIKNYRLLNTTLYVTLQPCIMCCGAIIQSRIKRLVFGANCNSSDHRF----SLKNLF 119

Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
                 +  +I   + ++    I+ +FF+++R
Sbjct: 120 CNPQKDYKLDIKKNVMQRECSDILINFFQKKR 151


>gi|296141715|ref|YP_003648958.1| CMP/dCMP deaminase zinc-binding protein [Tsukamurella paurometabola
           DSM 20162]
 gi|296029849|gb|ADG80619.1| CMP/dCMP deaminase zinc-binding protein [Tsukamurella paurometabola
           DSM 20162]
          Length = 144

 Score =  177 bits (449), Expect = 7e-43,   Method: Composition-based stats.
 Identities = 56/144 (38%), Positives = 73/144 (50%), Gaps = 3/144 (2%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGC-RI 65
           M  ALE A  +   +++PVGAV +  +  +++RAGNR   L D TAHAE+LAIR    R 
Sbjct: 1   MGLALEAAGLSG-PDDVPVGAVILDPDGVVLARAGNRREALADPTAHAEVLAIREAATRF 59

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
                L    L VTLEPC MCA A+  ARI RL +GA  PK G + +           H 
Sbjct: 60  GDGWRLGGCTLAVTLEPCAMCAGALVSARIERLVFGAYEPKTGAVGSVWDVVRDPRVTHR 119

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
             +  GI       ++ DFF   R
Sbjct: 120 VSVRGGIRAGECGALLTDFFAPHR 143


>gi|297205021|ref|ZP_06922417.1| tRNA-specific adenosine deaminase [Lactobacillus jensenii JV-V16]
 gi|297149599|gb|EFH29896.1| tRNA-specific adenosine deaminase [Lactobacillus jensenii JV-V16]
          Length = 174

 Score =  177 bits (449), Expect = 7e-43,   Method: Composition-based stats.
 Identities = 50/149 (33%), Positives = 83/149 (55%), Gaps = 1/149 (0%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIR 60
           ++   +M  A  EA+ A  ++E+P+GA+ V    ++I R  NR       T HAEILAI 
Sbjct: 5   EEKKHYMELAFAEAKKAEAQDEVPIGAIVVDPKGQVIGRGYNRRELDNVATHHAEILAIN 64

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
             C+ L+   L +  L+VTLEPC MCA AI  AR++ ++YGA + K G   +    + + 
Sbjct: 65  EACKTLNSWRLIDCSLFVTLEPCAMCAGAIINARLKEVFYGAPDHKAGASGSVVDLFAVE 124

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H P++  G+   ++  ++ +FF+  R
Sbjct: 125 KFNHHPQVIRGLYRDKASSMLTNFFRTIR 153


>gi|226363496|ref|YP_002781278.1| tRNA-specific adenosine deaminase [Rhodococcus opacus B4]
 gi|226241985|dbj|BAH52333.1| putative tRNA-specific adenosine deaminase [Rhodococcus opacus B4]
          Length = 152

 Score =  176 bits (448), Expect = 7e-43,   Method: Composition-based stats.
 Identities = 53/129 (41%), Positives = 73/129 (56%), Gaps = 2/129 (1%)

Query: 23  EIPVGAVAVLNNKI-ISRAGNRNRELKDVTAHAEILAIRMGCRILSQ-EILPEVDLYVTL 80
           ++PVGAV    + + +SRA N    + D TAHAEI+A+R   R+      L    L VTL
Sbjct: 24  DVPVGAVVFDADGVEVSRAVNSREAMADPTAHAEIIALRAAARVYGDGWRLEGATLAVTL 83

Query: 81  EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140
           EPCTMCA A+ LARI R+ +GA  PK G + +           H P++  G+ E     I
Sbjct: 84  EPCTMCAGALVLARISRVVFGAWEPKTGAVGSLWDVVRDRRLTHRPQVRGGVLEDECAGI 143

Query: 141 IQDFFKERR 149
           ++DFF+ERR
Sbjct: 144 LEDFFRERR 152


>gi|317123562|ref|YP_004097674.1| tRNA-adenosine deaminase [Intrasporangium calvum DSM 43043]
 gi|315587650|gb|ADU46947.1| tRNA-adenosine deaminase [Intrasporangium calvum DSM 43043]
          Length = 190

 Score =  176 bits (448), Expect = 8e-43,   Method: Composition-based stats.
 Identities = 44/129 (34%), Positives = 67/129 (51%), Gaps = 1/129 (0%)

Query: 22  NEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80
           +++PVGAV +  +  +I R  N   EL D T HAE++A+R     +    L    L VTL
Sbjct: 37  DDVPVGAVVIGSDGLVIGRGRNVREELGDPTGHAEVIALRSAAAAVGTWRLDGATLAVTL 96

Query: 81  EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140
           EPC MCA A   AR+ R+ +GA +PK G   +           H  ++  G+  + +  +
Sbjct: 97  EPCVMCAGAAIAARVERIVFGAWDPKAGACGSVWDLTRDPLATHRADVVGGVRAEEAATL 156

Query: 141 IQDFFKERR 149
           + DFF+ RR
Sbjct: 157 LVDFFERRR 165


>gi|315654318|ref|ZP_07907226.1| cytidine/deoxycytidylate deaminase [Mobiluncus curtisii ATCC 51333]
 gi|315491353|gb|EFU80970.1| cytidine/deoxycytidylate deaminase [Mobiluncus curtisii ATCC 51333]
          Length = 180

 Score =  176 bits (448), Expect = 9e-43,   Method: Composition-based stats.
 Identities = 54/144 (37%), Positives = 75/144 (52%), Gaps = 2/144 (1%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISR-AGNRN-RELKDVTAHAEILAIRMGCRI 65
           +  A   AQ A    +IPVGAV +    I++    N+      D +AHAEI+A+R     
Sbjct: 37  LETAYGLAQKAGRAGDIPVGAVVLTPEGIVAGLGLNQRENPPYDPSAHAEIVALREAAGR 96

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           L +  L    L  TLEPCTMCA AI  ARI RL +GA +PK G   +       +  +H 
Sbjct: 97  LERWNLKGCTLVATLEPCTMCAGAIVNARISRLIFGAWDPKAGACGSIRDVVRDSRLNHQ 156

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
            E+  G+ E R + +++ FF ERR
Sbjct: 157 VEVKGGVDEPRVKALLKAFFGERR 180


>gi|294678027|ref|YP_003578642.1| tRNA-specific adenosine deaminase [Rhodobacter capsulatus SB 1003]
 gi|294476847|gb|ADE86235.1| tRNA-specific adenosine deaminase [Rhodobacter capsulatus SB 1003]
          Length = 149

 Score =  176 bits (448), Expect = 9e-43,   Method: Composition-based stats.
 Identities = 72/130 (55%), Positives = 92/130 (70%), Gaps = 1/130 (0%)

Query: 21  RNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVT 79
           R E+PVGAV V  + ++I+RAGNR REL D TAHAEILAIR  C  L  E L   DLYVT
Sbjct: 20  RGEVPVGAVIVAPDGRVIARAGNRTRELNDPTAHAEILAIRAACAALGSERLAGHDLYVT 79

Query: 80  LEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139
           LEPC MCAAA++ ARI RLYYGA +PK GG+  G + +    CHH PE+Y GI+ + + +
Sbjct: 80  LEPCPMCAAALANARIARLYYGAGDPKSGGVAQGPRIFAHPQCHHVPEVYDGIAAEPAEK 139

Query: 140 IIQDFFKERR 149
           ++++FF  RR
Sbjct: 140 LLKEFFAARR 149


>gi|239815773|ref|YP_002944683.1| CMP/dCMP deaminase zinc-binding [Variovorax paradoxus S110]
 gi|239802350|gb|ACS19417.1| CMP/dCMP deaminase zinc-binding [Variovorax paradoxus S110]
          Length = 369

 Score =  176 bits (448), Expect = 9e-43,   Method: Composition-based stats.
 Identities = 45/126 (35%), Positives = 68/126 (53%)

Query: 24  IPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83
           +PVGAV V N + ++   N      D +AHAEI A+R G   L    L   +L+VTLEPC
Sbjct: 32  VPVGAVLVRNGQFVASGRNTPVAQHDPSAHAEINALRAGAAALGNYRLDGCELFVTLEPC 91

Query: 84  TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQD 143
            MCA A+  AR+ R+ +GA++PK G   +    +     +H  ++  G+       ++Q 
Sbjct: 92  AMCAGAMLHARLARVVFGAADPKTGAAGSVLDLFAEPRLNHRTQVQGGVLAAECSALLQG 151

Query: 144 FFKERR 149
           FF+ RR
Sbjct: 152 FFQLRR 157


>gi|94266763|ref|ZP_01290431.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [delta
           proteobacterium MLMS-1]
 gi|94270234|ref|ZP_01291686.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [delta
           proteobacterium MLMS-1]
 gi|93450891|gb|EAT01904.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [delta
           proteobacterium MLMS-1]
 gi|93452585|gb|EAT03162.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [delta
           proteobacterium MLMS-1]
          Length = 156

 Score =  176 bits (448), Expect = 9e-43,   Method: Composition-based stats.
 Identities = 60/147 (40%), Positives = 87/147 (59%), Gaps = 1/147 (0%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNN-KIISRAGNRNRELKDVTAHAEILAIRMG 62
              +M+ AL EA  AA R E+PVGA+ V  +  ++   GNR  E  D  AHAEI+ +R  
Sbjct: 7   DQQYMALALAEAARAAERGEVPVGALLVAADATVLVADGNRTIEYCDPAAHAEIVVLRRA 66

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
             +L+   LP   LYVTLEPC MCA A+  ARI RL YGA++PK G I++  Q    +  
Sbjct: 67  AALLANHRLPGATLYVTLEPCVMCAGALIQARIERLVYGAADPKAGAIDSLFQLAADSRL 126

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H  E+  G+  +    +++DFF+++R
Sbjct: 127 NHRFEVDSGVLAEECGLLLRDFFRQKR 153


>gi|124025482|ref|YP_001014598.1| putative cytidine/deoxycytidylate deaminase [Prochlorococcus
           marinus str. NATL1A]
 gi|123960550|gb|ABM75333.1| putative cytidine/deoxycytidylate deaminase [Prochlorococcus
           marinus str. NATL1A]
          Length = 155

 Score =  176 bits (448), Expect = 9e-43,   Method: Composition-based stats.
 Identities = 50/143 (34%), Positives = 77/143 (53%), Gaps = 1/143 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M+  L +A+    R E+P+ AV +    + I   GNR   +KD   HAE++A+R    I 
Sbjct: 1   MTRLLTKARLVGERGEVPIAAVILDKKGRCIGYGGNRRESMKDPLGHAELVALRQASWIK 60

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
           +     +  L V LEPC MCA A+  AR+ ++ YG+ +PK G +          + HH  
Sbjct: 61  NDWRFNDCTLIVNLEPCPMCAGALIQARMGKIIYGSEDPKRGALGGTINLAEHKSAHHRL 120

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
            I  GI E+ S++II D+FK++R
Sbjct: 121 LIEKGIMEEESKKIIVDWFKDKR 143


>gi|169627373|ref|YP_001701022.1| cytidine/deoxycytidylate deaminase family protein [Mycobacterium
           abscessus ATCC 19977]
 gi|169239340|emb|CAM60368.1| Cytidine/deoxycytidylate deaminase family protein [Mycobacterium
           abscessus]
          Length = 152

 Score =  176 bits (447), Expect = 9e-43,   Method: Composition-based stats.
 Identities = 50/149 (33%), Positives = 74/149 (49%), Gaps = 3/149 (2%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRM 61
                +  AL  A+ A  + ++P+GAV    +   ++RA N    L D TAHAE+LA+R 
Sbjct: 5   DDEALIRAALVAAREAGSQ-DVPIGAVIYAADGTELARAANARERLGDPTAHAEVLALRA 63

Query: 62  GCRILSQ-EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
                     L    L VT+EPCTMCA A+ LAR+ R+ +GA  PK G + +        
Sbjct: 64  AAAKHGDGWRLEGATLAVTVEPCTMCAGALVLARVGRVVFGAWEPKTGAVGSLWDVVRDR 123

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
              H PE+  G+ E     +++ FF  +R
Sbjct: 124 RQAHRPEVRGGVLEHECAALLERFFAAKR 152


>gi|331694222|ref|YP_004330461.1| CMP/dCMP deaminase zinc-binding protein [Pseudonocardia
           dioxanivorans CB1190]
 gi|326948911|gb|AEA22608.1| CMP/dCMP deaminase zinc-binding protein [Pseudonocardia
           dioxanivorans CB1190]
          Length = 153

 Score =  176 bits (447), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 53/148 (35%), Positives = 77/148 (52%), Gaps = 1/148 (0%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRM 61
                +  A++ A+ A    ++P+GAV V  +   ++ A N    L D TAHAEILA+R 
Sbjct: 6   DDERLVRRAIDVARGALGTGDVPIGAVVVDASGAEVATACNAREALGDPTAHAEILALRA 65

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
              +L +  L    L VTLEPCTMCA AI LAR+ R+ +GA  P+ G   +         
Sbjct: 66  AAAVLGEWRLTGCTLVVTLEPCTMCAGAIWLARVPRVVFGAWEPRTGAAGSLWDVLRDRR 125

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H PE+  G+       +++DFF E R
Sbjct: 126 LNHRPEVVGGVLADECAALLEDFFGELR 153


>gi|88703683|ref|ZP_01101399.1| Cytidine and deoxycytidylate deaminase [Congregibacter litoralis
           KT71]
 gi|88702397|gb|EAQ99500.1| Cytidine and deoxycytidylate deaminase [Congregibacter litoralis
           KT71]
          Length = 167

 Score =  176 bits (447), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 51/144 (35%), Positives = 74/144 (51%), Gaps = 1/144 (0%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM+ AL+ A+ AA   E+PVGA+ V + +I+    N      D TAHAEI A+R     L
Sbjct: 24  FMARALQLAKEAAEAGEVPVGALVVQDGRILGEGRNAQIGATDPTAHAEINALRAAASAL 83

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               +P   LYVTLEPC+MC  A+  ARI  L + A  P+ G + +       +  +H  
Sbjct: 84  DNYRMPGATLYVTLEPCSMCCGALVHARIGSLVFAAREPRAGAVVSTRNLLNESAFNHRV 143

Query: 127 EIYPGI-SEQRSRQIIQDFFKERR 149
                  +   S  +++ FF+ERR
Sbjct: 144 SWREDAENAPASAALLRAFFRERR 167


>gi|238508831|ref|XP_002385598.1| cytosine deaminase, putative [Aspergillus flavus NRRL3357]
 gi|317157687|ref|XP_001826520.2| cytidine and deoxycytidylate deaminase zinc-binding domain protein
           [Aspergillus oryzae RIB40]
 gi|220688490|gb|EED44843.1| cytosine deaminase, putative [Aspergillus flavus NRRL3357]
          Length = 174

 Score =  176 bits (447), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 46/150 (30%), Positives = 77/150 (51%), Gaps = 3/150 (2%)

Query: 1   MKKGN---VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57
           M++ +    FM  AL   + A    E PVG V V +N+I+S   N      + T HAE +
Sbjct: 1   MEEDSRHAYFMKQALLMGEKALETGETPVGCVLVYDNQIVSSGMNDTNRSMNGTRHAEFI 60

Query: 58  AIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFY 117
           A+    R   + +L    LYVT+EPC MCA+A+   RI+ +Y+G SN + GG  +    +
Sbjct: 61  ALERMLRNYPKSLLRSTKLYVTVEPCVMCASALRQYRIQAVYFGCSNERFGGTGSILSLH 120

Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
           T  +      +Y G+  + +  +++ F+ +
Sbjct: 121 TDFSIDPPYPVYGGLFSKEAVMLLRRFYIQ 150


>gi|167836996|ref|ZP_02463879.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia
           thailandensis MSMB43]
          Length = 194

 Score =  175 bits (446), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 54/148 (36%), Positives = 79/148 (53%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           ++   +M  AL  A+ A    E+PVGAV V  +++I+R  N      D +AHAE+ A+R 
Sbjct: 27  ERDRRYMRIALAAAEEARAAGEVPVGAVIVRGDEVIARGFNHPIGGHDPSAHAEMAALRA 86

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
             R L    +P  +LYVTLEPC MC+ AI  ARI R+ +GA +PK G   +    +  A 
Sbjct: 87  AARALRNYRMPGCELYVTLEPCLMCSGAIMHARIARVVFGAPDPKTGACGSVVDAFADAR 146

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H   +  G+        ++ FF ERR
Sbjct: 147 LNHHTTVEGGVLADECGAALKSFFAERR 174


>gi|27904732|ref|NP_777858.1| putative deaminase [Buchnera aphidicola str. Bp (Baizongia
           pistaciae)]
 gi|38372581|sp|Q89AM8|Y236_BUCBP RecName: Full=Uncharacterized protein bbp_236
 gi|27904129|gb|AAO26963.1| putative deaminase [Buchnera aphidicola str. Bp (Baizongia
           pistaciae)]
          Length = 162

 Score =  175 bits (446), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 53/148 (35%), Positives = 70/148 (47%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
                FM CA+  A+ + +  E+PVGAV V NN II +  N +    D TAHAEI A+R 
Sbjct: 3   DSDKYFMKCAIFLAKISEMIGEVPVGAVLVFNNTIIGKGLNSSILNHDPTAHAEIKALRN 62

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
           G + L    L    LYVTLEPC MC  AI  +RI RL +GA              + +  
Sbjct: 63  GAKFLKNYRLLHTTLYVTLEPCIMCYGAIIHSRISRLVFGAKYKNLQKYICCKNHFFINK 122

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
                 I   + E     ++  FFK +R
Sbjct: 123 NFRKISITQEVLESECSNLLSSFFKRKR 150


>gi|209544158|ref|YP_002276387.1| CMP/dCMP deaminase [Gluconacetobacter diazotrophicus PAl 5]
 gi|209531835|gb|ACI51772.1| CMP/dCMP deaminase zinc-binding [Gluconacetobacter diazotrophicus
           PAl 5]
          Length = 178

 Score =  175 bits (446), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 55/129 (42%), Positives = 76/129 (58%), Gaps = 1/129 (0%)

Query: 22  NEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80
            E+PVGAV +  +  I++RAGN+     D  AHAE+L +R   RIL    L    L VTL
Sbjct: 29  GEVPVGAVLLGPDGTILARAGNQVEAGHDAAAHAEMLVMRAAARILGSPRLTGCTLVVTL 88

Query: 81  EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140
           EPC MCAAA    R+ R+ +GA +PKGGG+E+G +      C H PE   G+ E+ +  +
Sbjct: 89  EPCPMCAAASVHFRVGRIVFGAYDPKGGGVEHGPRLLARPDCLHRPEWVGGVREREAAAL 148

Query: 141 IQDFFKERR 149
           ++DFF   R
Sbjct: 149 LRDFFAALR 157


>gi|227549638|ref|ZP_03979687.1| nucleoside deaminase [Corynebacterium lipophiloflavum DSM 44291]
 gi|227078294|gb|EEI16257.1| nucleoside deaminase [Corynebacterium lipophiloflavum DSM 44291]
          Length = 177

 Score =  175 bits (446), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 52/143 (36%), Positives = 71/143 (49%), Gaps = 2/143 (1%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M+ ALE A+      ++PVGAV      + +    NR     D TAHAE+ A+R   R L
Sbjct: 9   MARALEVART-TPPGDVPVGAVIYDALGREVGHGVNRREASGDPTAHAEVEALRAAARTL 67

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L   +L VTLEPCTMCA AI  AR+R L +GA  PK G + +           H  
Sbjct: 68  GAWRLDGCELVVTLEPCTMCAGAILGARVRSLVFGAFEPKTGAVGSLFDALRDPRHLHIV 127

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+  G+ E     ++ +FF + R
Sbjct: 128 EVRAGVREAECAALLTEFFADLR 150


>gi|189184848|ref|YP_001938633.1| cytosine deaminase [Orientia tsutsugamushi str. Ikeda]
 gi|189181619|dbj|BAG41399.1| cytosine deaminase [Orientia tsutsugamushi str. Ikeda]
          Length = 155

 Score =  175 bits (446), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 64/145 (44%), Positives = 90/145 (62%), Gaps = 2/145 (1%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           FM  A+E+A  A    E+PVG V V      I++RA N+     + T HAEI+AI   C 
Sbjct: 2   FMLQAIEQASQAFNLGEVPVGVVMVNRATRTILTRAYNKVETTLNPTFHAEIIAINKACS 61

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
           +LS + L   D+YV+LEPC MCAAA+S  RI R+++GA + K G IENG + +   T ++
Sbjct: 62  LLSCKYLHGYDIYVSLEPCAMCAAALSHVRIDRIFFGAYDEKFGAIENGVRLFYNTTVYY 121

Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149
            PEIY GI E +S++++Q FF   R
Sbjct: 122 KPEIYGGIMELQSKELLQKFFSNLR 146


>gi|167581517|ref|ZP_02374391.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia
           thailandensis TXDOH]
          Length = 194

 Score =  175 bits (446), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 53/148 (35%), Positives = 78/148 (52%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           ++   +M  AL  A+ A    E+PVGAV V  +++I+R  N      D +AHAE+ A+R 
Sbjct: 27  ERDRRYMRIALAAAEEARAAGEVPVGAVIVRGDEVIARGFNHPIGGHDPSAHAEMAALRA 86

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
             R L    +P  +LYVTLEPC MC+ AI  ARI R+ +GA +PK G   +    +    
Sbjct: 87  AARALRNYRMPGCELYVTLEPCLMCSGAIMHARIARVVFGAPDPKTGACGSVVDAFADVR 146

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H   +  G+        ++ FF ERR
Sbjct: 147 LNHHTTVEGGVLADECGAALKSFFAERR 174


>gi|72381983|ref|YP_291338.1| putative cytidine/deoxycytidylate deaminase [Prochlorococcus
           marinus str. NATL2A]
 gi|72001833|gb|AAZ57635.1| putative cytidine/deoxycytidylate deaminase [Prochlorococcus
           marinus str. NATL2A]
          Length = 155

 Score =  175 bits (446), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 51/143 (35%), Positives = 77/143 (53%), Gaps = 1/143 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M+  L +A+    R E+P+ AV +    + I   GNR   +KD   HAE++A+R    I 
Sbjct: 1   MTRLLTKARLVGERGEVPIAAVILDKKGRCIGYGGNRRESMKDPLGHAELVALRQASWIK 60

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
           +     +  L V LEPC MCA A+  AR+ ++ YG+ +PK G +          + HH  
Sbjct: 61  NDWRFNDCTLIVNLEPCPMCAGALIQARMGKIIYGSEDPKRGALGGTINLAEHKSAHHRM 120

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
            I  GI E+ SR+II D+FK++R
Sbjct: 121 LIERGIMEEESRKIIVDWFKDKR 143


>gi|317507917|ref|ZP_07965613.1| cytidine and deoxycytidylate deaminase zinc-binding protein
           [Segniliparus rugosus ATCC BAA-974]
 gi|316253782|gb|EFV13156.1| cytidine and deoxycytidylate deaminase zinc-binding protein
           [Segniliparus rugosus ATCC BAA-974]
          Length = 166

 Score =  175 bits (446), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 51/129 (39%), Positives = 70/129 (54%), Gaps = 2/129 (1%)

Query: 23  EIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQ-EILPEVDLYVTL 80
           ++PVGAV    +   ++RA N    L D TAHAEILA+R    +L     L    L VTL
Sbjct: 28  DVPVGAVVFGPDGAELARAANAREALGDPTAHAEILALRQAAAVLGDGWRLVGCTLAVTL 87

Query: 81  EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140
           EPCTMCA A   ARI R+ +GA  PK G + +     T    +H P + PG+ E    ++
Sbjct: 88  EPCTMCAGAAVNARIGRIVFGAREPKTGAVGSLWDVVTDPRLNHRPLVRPGVLEPECAEL 147

Query: 141 IQDFFKERR 149
            + FF++ R
Sbjct: 148 TRSFFRKLR 156


>gi|329938756|ref|ZP_08288152.1| putative deaminase [Streptomyces griseoaurantiacus M045]
 gi|329302247|gb|EGG46139.1| putative deaminase [Streptomyces griseoaurantiacus M045]
          Length = 157

 Score =  175 bits (446), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 42/126 (33%), Positives = 65/126 (51%), Gaps = 1/126 (0%)

Query: 22  NEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80
            ++PVGAV +  +   ++   N      D TAHAE+LA+R       +  L    L VTL
Sbjct: 15  GDVPVGAVVLSADGTPLATGHNEREATGDPTAHAEVLALRRAAAATGEWRLSGCTLVVTL 74

Query: 81  EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140
           EPCTMCA A+  +R+ R+ YGA + K G   +          +H PE+  G+  +   ++
Sbjct: 75  EPCTMCAGALQQSRVDRVVYGARDDKAGAAGSLWDLLRDRRLNHRPEVIEGVLAEDCARL 134

Query: 141 IQDFFK 146
           + DFF+
Sbjct: 135 LTDFFR 140


>gi|260906121|ref|ZP_05914443.1| cytidine/deoxycytidine deaminase [Brevibacterium linens BL2]
          Length = 148

 Score =  175 bits (446), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 46/131 (35%), Positives = 71/131 (54%), Gaps = 1/131 (0%)

Query: 20  LRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYV 78
             +++PVGAV +  N  +I R  NR    +D   HAE++A+R    +  +  L +  L V
Sbjct: 13  EHDDVPVGAVVIDGNGAVIGRGHNRREVDQDPLGHAELMAMRNAAEVTGRWRLDDATLVV 72

Query: 79  TLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSR 138
           TLEPC MCA A+  +RI R+ YGA + K G   +           H PE+Y G++  R R
Sbjct: 73  TLEPCAMCAGAVVGSRIARVVYGAFDEKAGAAGSVWDLLRDRAALHHPEVYSGVAASRCR 132

Query: 139 QIIQDFFKERR 149
           +++ +FF  +R
Sbjct: 133 ELLSEFFAAKR 143


>gi|57239296|ref|YP_180432.1| putative deaminase [Ehrlichia ruminantium str. Welgevonden]
 gi|58579261|ref|YP_197473.1| hypothetical protein ERWE_CDS_05970 [Ehrlichia ruminantium str.
           Welgevonden]
 gi|57161375|emb|CAH58299.1| putative deaminase [Ehrlichia ruminantium str. Welgevonden]
 gi|58417887|emb|CAI27091.1| Conserved hypothetical protein (putative cytidine deaminase)
           [Ehrlichia ruminantium str. Welgevonden]
          Length = 145

 Score =  175 bits (446), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 73/143 (51%), Positives = 95/143 (66%), Gaps = 4/143 (2%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  A+ +AQ      E+PVGAV V N K+IS   N N +  D TAHAEIL+IR  C +L
Sbjct: 6   YMRLAIGKAQE--DCLEVPVGAVIVYNGKVISCQNNSNVKNCDPTAHAEILSIRHACIVL 63

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
           S  IL + D+YVTLEPC MCA AIS ARIRRLY+GA N K GG+ENG + +    CH  P
Sbjct: 64  STHILNQCDMYVTLEPCAMCAQAISFARIRRLYFGAYNKKYGGVENGARVF--HFCHSVP 121

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+Y GI E+ + +++ +FF+  R
Sbjct: 122 EVYGGILEEENIRLMTNFFRRLR 144


>gi|256852104|ref|ZP_05557491.1| tRNA-adenosine deaminase [Lactobacillus jensenii 27-2-CHN]
 gi|260661326|ref|ZP_05862239.1| tRNA-adenosine deaminase [Lactobacillus jensenii 115-3-CHN]
 gi|282934787|ref|ZP_06340025.1| tRNA-specific adenosine deaminase [Lactobacillus jensenii 208-1]
 gi|256615516|gb|EEU20706.1| tRNA-adenosine deaminase [Lactobacillus jensenii 27-2-CHN]
 gi|260547781|gb|EEX23758.1| tRNA-adenosine deaminase [Lactobacillus jensenii 115-3-CHN]
 gi|281301150|gb|EFA93456.1| tRNA-specific adenosine deaminase [Lactobacillus jensenii 208-1]
          Length = 174

 Score =  175 bits (445), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 50/149 (33%), Positives = 82/149 (55%), Gaps = 1/149 (0%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIR 60
           ++   +M  A  EA+ A  ++E+P+GA+ V    ++I R  NR       T HAEILAI 
Sbjct: 5   EEKKHYMELAFAEAKKAEAQDEVPIGAIVVDPKGQVIGRGYNRRELDNVATHHAEILAIN 64

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
             C+ L+   L    L+VTLEPC MCA AI  AR++ ++YGA + K G   +    + + 
Sbjct: 65  EACKTLNSWRLINCSLFVTLEPCAMCAGAIINARLKEVFYGAPDHKAGASGSVVDLFAVE 124

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +H P++  G+   ++  ++ +FF+  R
Sbjct: 125 KFNHHPQVIRGLYRDKASSMLTNFFRTIR 153


>gi|194033488|ref|XP_001924271.1| PREDICTED: tRNA-specific adenosine deaminase 2 isoform 1 [Sus
           scrofa]
          Length = 191

 Score =  175 bits (445), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 44/154 (28%), Positives = 76/154 (49%), Gaps = 8/154 (5%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           ++   +M  A++ A+ A    E+PVG + V NN+++ +  N   + K+ T HAE++AI  
Sbjct: 20  EETEKWMEQAMQMAKEALENTEVPVGCLMVYNNEVVGKGRNEVNQTKNATRHAEMVAIDQ 79

Query: 62  GCRILS------QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
                        E+     LYVT+EPC MCAAA+ L +I  + YG  N + GG  +   
Sbjct: 80  VLDWCHRGGKSPSEVFERTVLYVTVEPCIMCAAALRLMKIPLVVYGCQNERFGGCGSVLD 139

Query: 116 F--YTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
                L       +  PG   + + ++++ F+K+
Sbjct: 140 IASADLPNTGRPFQCIPGYRAEEAVEMLKTFYKQ 173


>gi|86741404|ref|YP_481804.1| tRNA-adenosine deaminase [Frankia sp. CcI3]
 gi|86568266|gb|ABD12075.1| tRNA-adenosine deaminase [Frankia sp. CcI3]
          Length = 196

 Score =  175 bits (445), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 43/145 (29%), Positives = 64/145 (44%), Gaps = 3/145 (2%)

Query: 3   KGNVFMSCALEEAQNAALRN--EIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAI 59
           +   +M  AL+ A         + PVGAV    +   I+ A +      D TA+AEILA+
Sbjct: 42  QYEPWMRRALKLATTLPDPGADDPPVGAVIYGPDGTEIAAAHHDRERTADPTAYAEILAL 101

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
           R   + L    L +  L  TLEP TM A AI LARI RL  G  +   G + +       
Sbjct: 102 RQAAQALGTWRLTDCTLVTTLEPGTMSAGAIVLARIPRLIIGTWDKYNGAVCSLWDVVRD 161

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDF 144
              +H  E+ P + +     ++  +
Sbjct: 162 RRLNHFVEVIPDVLKDECDALLDSY 186


>gi|326488167|dbj|BAJ89922.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 218

 Score =  175 bits (445), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 49/161 (30%), Positives = 76/161 (47%), Gaps = 19/161 (11%)

Query: 6   VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
            FM  AL++A+ A    E+PVG V V N K+I+   NR    ++ T HAE+ AI +  + 
Sbjct: 41  AFMELALDQAKFALDNLEVPVGCVIVENGKVIASGSNRTNATRNATRHAEMEAIDVLLQE 100

Query: 66  LSQ---------EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116
                       E     DLYVT EPC MCA+A+S+  IR +Y+G  N K GG  +    
Sbjct: 101 WQSIGLDQTLVAEKFAGCDLYVTCEPCIMCASALSILGIREVYFGCPNDKFGGCGSVMSL 160

Query: 117 YT----------LATCHHSPEIYPGISEQRSRQIIQDFFKE 147
           +             T     +   GI  + +  + ++F+++
Sbjct: 161 HESLLSDDLTGSQDTRSRGFKCTGGIMAEEAVALFRNFYEQ 201


>gi|220905293|ref|YP_002480605.1| CMP/dCMP deaminase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
 gi|219869592|gb|ACL49927.1| CMP/dCMP deaminase zinc-binding [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
          Length = 195

 Score =  175 bits (444), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 55/146 (37%), Positives = 82/146 (56%), Gaps = 1/146 (0%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
              M  AL+ A++AA   E+PVGAV V  + ++++  GN    L D TAHAEILA+R   
Sbjct: 42  ECLMDRALDRARHAAALGEVPVGAVLVAPDGRVLAEEGNAPVALSDPTAHAEILALRRAG 101

Query: 64  RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123
           ++L    L    L VTLEPC MCAAA   AR+  L YGA++   G + +  +++   + +
Sbjct: 102 QMLGNYRLGGCVLVVTLEPCAMCAAACIHARLAGLVYGAADDLAGAVVSRAEYFDAQSAN 161

Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149
           HS     G+  +    +++DFF  RR
Sbjct: 162 HSLWHMGGVRGEECATLLRDFFAVRR 187


>gi|162147097|ref|YP_001601558.1| cytidine deaminase protein [Gluconacetobacter diazotrophicus PAl 5]
 gi|161785674|emb|CAP55245.1| putative cytidine deaminase protein [Gluconacetobacter
           diazotrophicus PAl 5]
          Length = 193

 Score =  175 bits (444), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 55/129 (42%), Positives = 76/129 (58%), Gaps = 1/129 (0%)

Query: 22  NEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80
            E+PVGAV +  +  I++RAGN+     D  AHAE+L +R   RIL    L    L VTL
Sbjct: 44  GEVPVGAVLLGPDGTILARAGNQVEAGHDAAAHAEMLVMRAAARILGSPRLTGCTLVVTL 103

Query: 81  EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140
           EPC MCAAA    R+ R+ +GA +PKGGG+E+G +      C H PE   G+ E+ +  +
Sbjct: 104 EPCPMCAAASVHFRVGRIVFGAYDPKGGGVEHGPRLLARPDCLHRPEWVGGVREREAAAL 163

Query: 141 IQDFFKERR 149
           ++DFF   R
Sbjct: 164 LRDFFAALR 172


>gi|61098160|ref|NP_080024.3| tRNA-specific adenosine deaminase 2 [Mus musculus]
 gi|81885246|sp|Q6P6J0|ADAT2_MOUSE RecName: Full=tRNA-specific adenosine deaminase 2; AltName:
           Full=Deaminase domain-containing protein 1; AltName:
           Full=tRNA-specific adenosine-34 deaminase subunit ADAT2
 gi|38328211|gb|AAH62195.1| Adenosine deaminase, tRNA-specific 2, TAD2 homolog (S. cerevisiae)
           [Mus musculus]
 gi|148671551|gb|EDL03498.1| deaminase domain containing 1 [Mus musculus]
          Length = 191

 Score =  175 bits (444), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 44/154 (28%), Positives = 75/154 (48%), Gaps = 8/154 (5%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           ++   +M  A+  A+ A    E+PVG + V NN+++ +  N   + K+ T HAE++AI  
Sbjct: 20  QETEKWMEEAMRMAKEALENIEVPVGCLMVYNNEVVGKGRNEVNQTKNATRHAEMVAIDQ 79

Query: 62  GCRILSQE------ILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
                 Q       +     LYVT+EPC MCAAA+ L +I  + YG  N + GG  +   
Sbjct: 80  VLDWCHQHGQSPSTVFEHTVLYVTVEPCIMCAAALRLMKIPLVVYGCQNERFGGCGSVLN 139

Query: 116 F--YTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
                L       +  PG   + + ++++ F+K+
Sbjct: 140 IASADLPNTGRPFQCIPGYRAEEAVELLKTFYKQ 173


>gi|262183239|ref|ZP_06042660.1| hypothetical protein CaurA7_04544 [Corynebacterium aurimucosum ATCC
           700975]
          Length = 147

 Score =  175 bits (444), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 51/144 (35%), Positives = 72/144 (50%), Gaps = 3/144 (2%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  ALE A+      +IPVGAV    +   ++   NR  +L D TAHAE+ AIR   R+ 
Sbjct: 1   MRRALEVART-TPVGDIPVGAVLYDASGNELATGVNRREQLNDPTAHAEVEAIRQAVRVH 59

Query: 67  SQ-EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
                L   +L VTLEPC MCA AI  +R+  + +GA  PK G   +  +        H 
Sbjct: 60  GDGWRLEGCELVVTLEPCAMCAGAIQASRVSSVVFGAFEPKTGACGSLVEVLRAPGALHV 119

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
           PE+  G+ E+   +++  FF   R
Sbjct: 120 PEVRSGVLEEECAELLTGFFGGLR 143


>gi|329119731|ref|ZP_08248411.1| tRNA-specific adenosine deaminase [Neisseria bacilliformis ATCC
           BAA-1200]
 gi|327464180|gb|EGF10485.1| tRNA-specific adenosine deaminase [Neisseria bacilliformis ATCC
           BAA-1200]
          Length = 151

 Score =  174 bits (443), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 54/142 (38%), Positives = 82/142 (57%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M+ AL++A+ AA  NE+PVGA+ V + +I++ A N       V AHAEILA+    + L 
Sbjct: 10  MAAALDKARQAAAENEVPVGALIVRDGQILAAAHNACAAQNSVAAHAEILALTAAGQSLG 69

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
              L   D Y+TLEPC MCA+A+  ARI+R+ + A+ PK G   +    +     +    
Sbjct: 70  TPRLDSCDAYITLEPCPMCASALMQARIKRVIFAAAEPKSGAAGSVCNLFADTRLNAHTA 129

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
           ++ GI  + SR ++Q FF+ RR
Sbjct: 130 VFGGIMAEESRTLLQAFFRSRR 151


>gi|295103971|emb|CBL01515.1| tRNA-adenosine deaminase [Faecalibacterium prausnitzii SL3/3]
          Length = 166

 Score =  174 bits (443), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 49/126 (38%), Positives = 73/126 (57%), Gaps = 1/126 (0%)

Query: 24  IPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83
           +PVGAV   + ++I+ A N     K+   HAE+LAI   C+ L    L E +L+VTLEPC
Sbjct: 23  VPVGAVVARHGEVIATAHNTRETEKNALHHAELLAIDAACKALGGWRLWECELFVTLEPC 82

Query: 84  TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQD 143
            MCA  I  +R+RR+ YGA++ K G   + T  + L   +H P +  G+ E  ++Q++Q 
Sbjct: 83  PMCAGGIINSRLRRVVYGAADTKAGCCGSVTDLFALP-FNHHPVVEKGLREAEAQQLLQA 141

Query: 144 FFKERR 149
           FF   R
Sbjct: 142 FFVSLR 147


>gi|118468323|ref|YP_890544.1| cytidine and deoxycytidylate deaminase family protein
           [Mycobacterium smegmatis str. MC2 155]
 gi|118169610|gb|ABK70506.1| cytidine and deoxycytidylate deaminase family protein
           [Mycobacterium smegmatis str. MC2 155]
          Length = 149

 Score =  174 bits (443), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 50/143 (34%), Positives = 75/143 (52%), Gaps = 3/143 (2%)

Query: 9   SCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
             ALE A+ A  R ++P+GAV    +   ++RA N      D   HAEI+A+R   ++L 
Sbjct: 8   RAALEAARTAGPR-DVPIGAVVYAADGTELARAVNVREAYGDPAGHAEIVAMRAAAKVLG 66

Query: 68  Q-EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L    L VT+EPCTMCA A+ LAR+ RL +GA  PK G + +          +H P
Sbjct: 67  DGWRLEGATLAVTVEPCTMCAGALVLARVSRLVFGAWEPKTGAVGSLWDVVRDRRLNHRP 126

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+  G+       ++++FF  +R
Sbjct: 127 EVIGGVLADECAALLEEFFARQR 149


>gi|317034863|ref|XP_001400634.2| cytidine and deoxycytidylate deaminase zinc-binding domain protein
           [Aspergillus niger CBS 513.88]
          Length = 190

 Score =  174 bits (443), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 43/146 (29%), Positives = 71/146 (48%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
            +   FM  AL   + A    E PVG V V + KI+    N   +  + T HAE +AI  
Sbjct: 14  SEHAYFMKQALLMGEKALETGETPVGCVLVYDKKIVGFGMNDTNKSMNGTRHAEFIAIEE 73

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
                 +  L   DLYVT+EPC MCA+A+   +IR++Y+G  N + GG  +    +   +
Sbjct: 74  MLETYPRSALRSTDLYVTVEPCVMCASALRQYQIRKVYFGCGNDRFGGTGSILSLHADRS 133

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKE 147
              S  +  G+  + +  +++ F+ +
Sbjct: 134 IDPSYPVQGGLFHKEAIMLLRRFYIQ 159


>gi|297566040|ref|YP_003685012.1| tRNA(Ile)-lysidine synthetase [Meiothermus silvanus DSM 9946]
 gi|296850489|gb|ADH63504.1| tRNA(Ile)-lysidine synthetase [Meiothermus silvanus DSM 9946]
          Length = 524

 Score =  174 bits (443), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 58/146 (39%), Positives = 80/146 (54%), Gaps = 7/146 (4%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
              FM  AL EA +A  R E+P+GAV V   K+I++AGN+  E +D TAHAE+LAIR   
Sbjct: 380 DERFMRLALAEAHSAGGRGEVPIGAVLVRGEKVIAKAGNQVEEFQDATAHAELLAIRAAL 439

Query: 64  RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123
             L +++LP   LYVTLEPC MC  A+  A++ RL YG  N K G        +T+    
Sbjct: 440 EALGEKVLPGSTLYVTLEPCPMCYGAMLEAQVSRLVYGMENLKAGA-------FTVYGLQ 492

Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149
               +  G  E    ++++ FF   R
Sbjct: 493 PRIGVDAGRLEGPCAKLLKAFFVRMR 518


>gi|54022202|ref|YP_116444.1| putative cytidine/deoxycytidylate deaminase [Nocardia farcinica IFM
           10152]
 gi|54013710|dbj|BAD55080.1| putative cytidine/deoxycytidylate deaminase [Nocardia farcinica IFM
           10152]
          Length = 159

 Score =  174 bits (443), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 53/148 (35%), Positives = 74/148 (50%), Gaps = 3/148 (2%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMG 62
               +  A+E    AA   ++PVGAV      + ++RA N      D TAHAEILA+R  
Sbjct: 13  DEAMIRVAIEA-AAAADPRDVPVGAVVFDAQGRELARAANAREASGDPTAHAEILALRRA 71

Query: 63  CRILSQ-EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
            ++      L    L VTLEPCTMCA A+ LAR+ RL +GA  PK G + +         
Sbjct: 72  AQVHGDGWRLAGATLAVTLEPCTMCAGALVLARVDRLVFGAWEPKTGAVGSLWDVVRDRR 131

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H PE+  G+ E     ++  FF+  R
Sbjct: 132 LNHRPEVRGGVLETECAALLDTFFRTHR 159


>gi|239916882|ref|YP_002956440.1| tRNA-adenosine deaminase [Micrococcus luteus NCTC 2665]
 gi|281414664|ref|ZP_06246406.1| tRNA-adenosine deaminase [Micrococcus luteus NCTC 2665]
 gi|239838089|gb|ACS29886.1| tRNA-adenosine deaminase [Micrococcus luteus NCTC 2665]
          Length = 168

 Score =  174 bits (442), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 7/155 (4%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIR 60
           ++ + +M  AL  A+ A    ++P+GA  V  +  +++  GN   +  D TAHAE+LA+R
Sbjct: 13  EQEHAWMGLALRAARAAGAAGDVPIGAALVAGDGTVLAVVGNEREQHHDPTAHAEVLALR 72

Query: 61  ------MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGT 114
                           L +  L VTLEPC MCA A+ LARI R+ +GA +PK G   +  
Sbjct: 73  RGAELRAAAGAHDGWRLTDCTLVVTLEPCPMCAGALLLARIPRVVFGAWDPKAGACGSVL 132

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
                   +H  ++  G+  + S  +++ FF  +R
Sbjct: 133 DVVRDPRFNHRVQVRAGVRSEESAALLRGFFAAQR 167


>gi|227499915|ref|ZP_03930008.1| nucleoside deaminase [Anaerococcus tetradius ATCC 35098]
 gi|227218024|gb|EEI83297.1| nucleoside deaminase [Anaerococcus tetradius ATCC 35098]
          Length = 169

 Score =  174 bits (442), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 53/148 (35%), Positives = 76/148 (51%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           ++   FM  A+ EA+ A    E+PVGAV VL+ KII R  N   + K    HAEI+AI+ 
Sbjct: 14  EEDYFFMGEAINEARLARFIEEVPVGAVIVLDGKIIGRGHNYTFKGKSALKHAEIMAIKE 73

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
               +    L    +YVT+EPC+MCA AI  +RI RL  G  + K G   + T      +
Sbjct: 74  ASAYIDDFRLERATMYVTMEPCSMCAGAIINSRIDRLVIGIRDHKRGACGSNTNITGDRS 133

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
             H  +   G+ ++ +   IQ FF+  R
Sbjct: 134 QLHYLDAEFGLRDEEALYEIQTFFRYLR 161


>gi|332213485|ref|XP_003255854.1| PREDICTED: tRNA-specific adenosine deaminase 2-like [Nomascus
           leucogenys]
          Length = 191

 Score =  174 bits (442), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 44/154 (28%), Positives = 75/154 (48%), Gaps = 8/154 (5%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           ++   +M  A+  A+ A    E+PVG + V NN+++ +  N   + K+ T HAE++AI  
Sbjct: 20  EETEKWMEEAVRMAKEALENTEVPVGCLMVYNNEVVGKGRNEVNQTKNATRHAEMVAIDQ 79

Query: 62  GCRIL------SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
                        E+     LYVT+EPC MCAAA+ L +I  + YG  N + GG  +   
Sbjct: 80  VLDWCRQSGKSPSEVFEHTVLYVTVEPCIMCAAALRLMKIPLVVYGCQNERFGGCGSVLN 139

Query: 116 F--YTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
                L       +  PG   + + ++++ F+K+
Sbjct: 140 IASADLPNTGRPFQCIPGYRAEEAVEMLKTFYKQ 173


>gi|255324366|ref|ZP_05365485.1| tRNA-specific adenosine deaminase [Corynebacterium
           tuberculostearicum SK141]
 gi|255298585|gb|EET77883.1| tRNA-specific adenosine deaminase [Corynebacterium
           tuberculostearicum SK141]
          Length = 143

 Score =  174 bits (442), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 49/144 (34%), Positives = 73/144 (50%), Gaps = 3/144 (2%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  AL+ A+      ++PVGAV        ++   NR  EL D TAHAE+ AIR   R+ 
Sbjct: 1   MRRALDVAKRTPA-GDVPVGAVLYDAAGTELATGVNRREELADPTAHAEVEAIRQAVRVH 59

Query: 67  SQ-EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
                L   +L VTLEPC MCA A+  AR+  + +GA  PK G   +        T   +
Sbjct: 60  GDGWRLSGCELVVTLEPCAMCAGALQAARVGSVVFGAFEPKTGACGSLIDVLRAPTAPFT 119

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
           P++  G+ E+    ++++FF + R
Sbjct: 120 PQVRGGVLEEECAALLRNFFDDLR 143


>gi|256372768|ref|YP_003110592.1| CMP/dCMP deaminase zinc-binding [Acidimicrobium ferrooxidans DSM
           10331]
 gi|256009352|gb|ACU54919.1| CMP/dCMP deaminase zinc-binding [Acidimicrobium ferrooxidans DSM
           10331]
          Length = 156

 Score =  174 bits (442), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 50/147 (34%), Positives = 76/147 (51%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
               ++  A   A++AA   E+PVGAV V + +++    N   E +   AHAE+LA+   
Sbjct: 5   DDRRWLDVAFGLAEDAARTAEVPVGAVVVRSGRVLGARHNETIERRSSLAHAELLALSDA 64

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
                   +   D+YVTLEPC MCA A+ LAR RR+ + A +PK G   +          
Sbjct: 65  LADAGDGYVLGADVYVTLEPCAMCAGALVLARARRVVFAAWDPKAGACGSLMNIAADPRL 124

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H  EI  G+  +R+  +++ FF ERR
Sbjct: 125 NHELEIVGGVDAERAALLLRRFFSERR 151


>gi|255021639|ref|ZP_05293681.1| tRNA-specific adenosine-34 deaminase [Acidithiobacillus caldus ATCC
           51756]
 gi|254968899|gb|EET26419.1| tRNA-specific adenosine-34 deaminase [Acidithiobacillus caldus ATCC
           51756]
          Length = 178

 Score =  174 bits (442), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 57/149 (38%), Positives = 82/149 (55%), Gaps = 1/149 (0%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIR 60
                +M  ALE+A+ A+L  E+PVGAV +  +  +++RA NR   ++D  AHAEIL +R
Sbjct: 22  TDDRHWMGLALEQARCASLVGEVPVGAVLLSASGALLARAHNRPIAMQDPCAHAEILVLR 81

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              R L    L    LYVTLEPC MCA A+  AR+ +L + A +PKGG + +        
Sbjct: 82  EAARALGNYRLLGTTLYVTLEPCAMCAGAMLQARVAQLVFAARDPKGGAVVSRLGVLDAE 141

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
              H      G   + S+ ++QDFF+ RR
Sbjct: 142 PRLHRLRWREGPGARESQALLQDFFRARR 170


>gi|39938589|ref|NP_950355.1| cytosine/adenosine deaminase [Onion yellows phytoplasma OY-M]
 gi|39721698|dbj|BAD04188.1| cytosine/adenosine deaminase [Onion yellows phytoplasma OY-M]
          Length = 161

 Score =  174 bits (442), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 62/148 (41%), Positives = 82/148 (55%), Gaps = 1/148 (0%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           ++   FM  AL+EAQ A L+ E+P+GAVAVLN KII+RA N     K    HAE LA+  
Sbjct: 6   QQHIFFMKEALKEAQKAYLKEEVPIGAVAVLNQKIIARAHNNRNTKKLFFGHAEFLALMK 65

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
             + ++   L +V LYVTLEPC MC  AI  A I+ LYYG S  K     + +    +  
Sbjct: 66  AGKKINSRFLNDVSLYVTLEPCLMCTGAIIQAGIKNLYYGTSMEKSYSFNDMSSIQNMPF 125

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
                 I  G+  Q S Q++Q FF+E R
Sbjct: 126 MD-KLNIQSGLLAQESMQLLQKFFQELR 152


>gi|269958624|ref|YP_003328411.1| putative cytosine/adenosine deaminase [Anaplasma centrale str.
           Israel]
 gi|269848453|gb|ACZ49097.1| putative cytosine/adenosine deaminase [Anaplasma centrale str.
           Israel]
          Length = 154

 Score =  174 bits (442), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 67/150 (44%), Positives = 94/150 (62%), Gaps = 5/150 (3%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAI 59
           M   + +M  A+ EA ++    E+PVGA+ V     +IS   N      D TAHAE+LAI
Sbjct: 3   MLPESPYMRLAMLEAVSSPA--EVPVGAIVVDERGVVISSRHNLTLRNSDPTAHAEMLAI 60

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
           R  C   S  +L   D+YVTLEPC MCA AISL+RIRRLY+GA N K GG+E+G + +  
Sbjct: 61  REACLHFSTHVLNNCDMYVTLEPCAMCAYAISLSRIRRLYFGAYNVKCGGVEHGARVFRF 120

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             C+H PE+Y G  E+ + +I+++FF++ R
Sbjct: 121 --CNHIPEVYGGFLERENAEILKNFFQKLR 148


>gi|326403669|ref|YP_004283751.1| tRNA-specific adenosine deaminase [Acidiphilium multivorum AIU301]
 gi|325050531|dbj|BAJ80869.1| tRNA-specific adenosine deaminase [Acidiphilium multivorum AIU301]
          Length = 154

 Score =  173 bits (441), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 57/130 (43%), Positives = 84/130 (64%), Gaps = 1/130 (0%)

Query: 21  RNEIPVGAVAVLNNK-IISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVT 79
           R E+PVGAV V     +++ AGN      D TAHAEILA+R   +    + L    L+VT
Sbjct: 17  RGEVPVGAVVVDAGGSVLAAAGNEVEARGDPTAHAEILALRAAAQRRGGKFLQGCRLFVT 76

Query: 80  LEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139
           LEPC +CAAAISL RI RL +GA +PK GG+E+G + ++  TCH+ PE+  G+ +  + +
Sbjct: 77  LEPCPLCAAAISLFRIDRLVFGAYDPKSGGVEHGPRVFSHPTCHYRPEVVGGVDQTAAAE 136

Query: 140 IIQDFFKERR 149
           +++ FF ++R
Sbjct: 137 LLRHFFSQKR 146


>gi|224111764|ref|XP_002315970.1| predicted protein [Populus trichocarpa]
 gi|222865010|gb|EEF02141.1| predicted protein [Populus trichocarpa]
          Length = 1071

 Score =  173 bits (441), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 54/114 (47%), Positives = 65/114 (57%)

Query: 2    KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
            K   +FM  AL +A+ AA   E+PVGAV V + KII+R  N   EL+D TAHAE++ IR 
Sbjct: 927  KIDEMFMREALLDAKKAADSWEVPVGAVMVHHGKIIARGYNLVEELRDSTAHAEMICIRE 986

Query: 62   GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
                L    L E  LYVTLEPC MCA AI  ARI  L +GA N   G   +   
Sbjct: 987  ASNQLRSWRLSETTLYVTLEPCPMCAGAILQARINTLVWGAPNKLLGADGSWIS 1040


>gi|160942564|ref|ZP_02089811.1| hypothetical protein FAEPRAM212_00039 [Faecalibacterium prausnitzii
           M21/2]
 gi|158446148|gb|EDP23151.1| hypothetical protein FAEPRAM212_00039 [Faecalibacterium prausnitzii
           M21/2]
          Length = 169

 Score =  173 bits (441), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 48/126 (38%), Positives = 73/126 (57%), Gaps = 1/126 (0%)

Query: 24  IPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83
           +PVGAV   + ++++ A N     K+   HAE+LAI   C+ L    L E +L+VTLEPC
Sbjct: 26  VPVGAVVARHGEVVATAHNTRETEKNALHHAELLAIDAACKALGGWRLWECELFVTLEPC 85

Query: 84  TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQD 143
            MCA  I  +R+RR+ YGA++ K G   + T  + L   +H P +  G+ E  ++Q++Q 
Sbjct: 86  PMCAGGIINSRLRRVVYGAADTKAGCCGSVTDLFALP-FNHHPVVEKGLREAEAQQLLQA 144

Query: 144 FFKERR 149
           FF   R
Sbjct: 145 FFVSLR 150


>gi|296199377|ref|XP_002747141.1| PREDICTED: tRNA-specific adenosine deaminase 2-like [Callithrix
           jacchus]
          Length = 191

 Score =  173 bits (441), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 44/154 (28%), Positives = 75/154 (48%), Gaps = 8/154 (5%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           ++   +M  A+  A+ A    E+PVG + V NN+++ +  N   + K+ T HAE++AI  
Sbjct: 20  EETEKWMEEAMHMAKEALENTEVPVGCLMVYNNEVVGKGRNEVNQTKNATRHAEMVAIDQ 79

Query: 62  GCRILS------QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
                        E+     LYVT+EPC MCAAA+ L +I  + YG  N + GG  +   
Sbjct: 80  VLDWCGRSGKNSSEVFEHTVLYVTVEPCIMCAAALRLMKIPLVVYGCQNERFGGCGSVLN 139

Query: 116 F--YTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
                L       +  PG   + + ++++ F+K+
Sbjct: 140 IASADLPNTGRPFQCIPGYRAEEAVEMLKTFYKQ 173


>gi|297679305|ref|XP_002817478.1| PREDICTED: tRNA-specific adenosine deaminase 2-like [Pongo abelii]
          Length = 191

 Score =  173 bits (441), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 44/154 (28%), Positives = 75/154 (48%), Gaps = 8/154 (5%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           ++   +M  A+  A+ A    E+PVG + V NN+++ +  N   + K+ T HAE++AI  
Sbjct: 20  EETEKWMEEAMHMAKEALENTEVPVGCLMVYNNEVVGKGRNEVNQTKNATRHAEMVAIDQ 79

Query: 62  GCRIL------SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
                        E+     LYVT+EPC MCAAA+ L +I  + YG  N + GG  +   
Sbjct: 80  VLDWCLQSGKSPSEVFEHTVLYVTVEPCIMCAAALRLMKIPLVVYGCQNERFGGCGSVLN 139

Query: 116 F--YTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
                L       +  PG   + + ++++ F+K+
Sbjct: 140 IASADLPNTGRPFQCIPGYRAEEAVEMLKTFYKQ 173


>gi|291244202|ref|XP_002741990.1| PREDICTED: tRNA-specific adenosine deaminase 2-like [Saccoglossus
           kowalevskii]
          Length = 209

 Score =  173 bits (441), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 42/149 (28%), Positives = 73/149 (48%), Gaps = 8/149 (5%)

Query: 6   VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
            +M  +L+ A +A    E+PVG + V  +++I +  N   E ++ T HAE++AI      
Sbjct: 14  KWMEKSLDMAHDALFNGEVPVGCLMVYKDEVIGKGRNCVNETRNATRHAEMVAIDEVIGW 73

Query: 66  LSQEI------LPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
             +          +  LYVT+EPC MCA A+ L  +  + YG SN + GG  +    +  
Sbjct: 74  CEKSNQVKEAVFSKTVLYVTVEPCIMCAGALRLLHVPLVVYGCSNERFGGCGSVLNVHKD 133

Query: 120 ATCHHS--PEIYPGISEQRSRQIIQDFFK 146
              +H    +   GI  + +  +++DF+K
Sbjct: 134 DIDNHGKPFKCISGIFAEEAIALLKDFYK 162


>gi|289704736|ref|ZP_06501159.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Micrococcus luteus SK58]
 gi|289558546|gb|EFD51814.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Micrococcus luteus SK58]
          Length = 168

 Score =  173 bits (441), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 7/155 (4%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIR 60
           ++ + +M  AL  A+ A    ++P+GA  V  +  +++  GN   +  D TAHAE+LA+R
Sbjct: 13  EQEHAWMGLALRAARAAGAAGDVPIGAALVAGDGTVLAVVGNEREQHHDPTAHAEVLALR 72

Query: 61  ------MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGT 114
                           L +  L VTLEPC MCA A+ LARI R+ +GA +PK G   +  
Sbjct: 73  RGAELRAAAGAGDGWRLTDCTLVVTLEPCPMCAGALLLARIPRVVFGAWDPKAGACGSVL 132

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
                   +H  ++  G+  + S  +++ FF  +R
Sbjct: 133 DVVRDPRFNHQVQVRAGVRSEESAALLRGFFAAQR 167


>gi|116515096|ref|YP_802725.1| hypothetical protein BCc_160 [Buchnera aphidicola str. Cc (Cinara
           cedri)]
 gi|116256950|gb|ABJ90632.1| tRNA-specific adenosine deaminase [Buchnera aphidicola str. Cc
           (Cinara cedri)]
          Length = 153

 Score =  173 bits (441), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 54/147 (36%), Positives = 77/147 (52%), Gaps = 1/147 (0%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
            N +M  AL++A       E+P+G++ + NN +IS A N    L D +AHAEIL IR G 
Sbjct: 5   DNYWMKYALKQAYLGKKNGEVPIGSLLIKNNNLISSAWNSCINLFDASAHAEILVIRNGG 64

Query: 64  RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123
           +IL    L    LYVT EPC MC+ AI  ARI ++ YG+ + K         F  +    
Sbjct: 65  KILKNYRLKNTILYVTHEPCFMCSEAIINARINKVVYGSYSFKKNCFSYYINFLYINNIK 124

Query: 124 HSP-EIYPGISEQRSRQIIQDFFKERR 149
           H   EI  GI       ++++FF+ +R
Sbjct: 125 HHIKEIKSGILLYECSNLLKNFFRRKR 151


>gi|226941431|ref|YP_002796505.1| CumB [Laribacter hongkongensis HLHK9]
 gi|226716358|gb|ACO75496.1| CumB [Laribacter hongkongensis HLHK9]
          Length = 171

 Score =  173 bits (441), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 55/138 (39%), Positives = 71/138 (51%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  A+  AQ AA   E+PVGA+ VL  K+I R  N      D TAHAEI A+R       
Sbjct: 1   MRQAILLAQEAAAAGEVPVGALVVLEGKVIGRGANAPIGRHDPTAHAEIAALRAAAERAG 60

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
              LP  +LYVTLEPC MCA AI  ARI R+ +GAS+ K G   +    +     +H  E
Sbjct: 61  NYRLPGAELYVTLEPCAMCAGAIQHARIARVVFGASDAKTGAAGSVVDLFAEPRLNHHAE 120

Query: 128 IYPGISEQRSRQIIQDFF 145
           +  G+       ++  FF
Sbjct: 121 VCGGLLADECAAVLSGFF 138


>gi|68537118|ref|YP_251823.1| putative cytosine/adenosine deaminase [Corynebacterium jeikeium
           K411]
 gi|68264717|emb|CAI38205.1| putative cytosine/adenosine deaminase [Corynebacterium jeikeium
           K411]
          Length = 142

 Score =  173 bits (441), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 50/144 (34%), Positives = 70/144 (48%), Gaps = 4/144 (2%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  ALE A       ++PVGAV +  + + + R  NR     D TAHAEILAIR   + L
Sbjct: 1   MRRALEIAAETPA-GDVPVGAVILGPDGRELGRGVNRREADNDPTAHAEILAIREAVQEL 59

Query: 67  SQ-EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
                L +  L VTLEPC MCA A+  ARI  + +GA  P+ G   +       +   H 
Sbjct: 60  GDAWRLEDCTLVVTLEPCAMCAGALVGARIGSIIFGAYEPRTGACGSVWDVPRESPL-HW 118

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
            E+  G+      ++++ FF   R
Sbjct: 119 AEVRGGVLAGECEELLRQFFARLR 142


>gi|242279729|ref|YP_002991858.1| CMP/dCMP deaminase zinc-binding [Desulfovibrio salexigens DSM 2638]
 gi|242122623|gb|ACS80319.1| CMP/dCMP deaminase zinc-binding [Desulfovibrio salexigens DSM 2638]
          Length = 169

 Score =  173 bits (441), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 48/144 (33%), Positives = 71/144 (49%), Gaps = 2/144 (1%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  A+ EA  A    E+P+GA       ++++   N      D T HAE+  IR  C+ L
Sbjct: 24  MDTAIREAFKARRHEEVPIGAALFTAEGELLATGNNTPLTQNDPTGHAEVNCIRNACKNL 83

Query: 67  SQEILP-EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
               LP    L VTLEPC MC  AI  AR+  + +GA +PK G + +  +   L+  +H 
Sbjct: 84  DNYRLPRGTILVVTLEPCIMCLGAIIHARVGGVVFGAPDPKAGAVVSNLEGTDLSFANHK 143

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
                G+ E   ++I+Q FF  +R
Sbjct: 144 FWTIGGVCENECKEILQSFFLHKR 167


>gi|237784829|ref|YP_002905534.1| putative cytosine/adenosine deaminase [Corynebacterium
           kroppenstedtii DSM 44385]
 gi|237757741|gb|ACR16991.1| putative cytosine/adenosine deaminase [Corynebacterium
           kroppenstedtii DSM 44385]
          Length = 163

 Score =  173 bits (441), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 45/151 (29%), Positives = 73/151 (48%), Gaps = 4/151 (2%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIR 60
           ++   +M  AL+ A+      ++PVGAV V  +  ++    N      D TAHAE++A+R
Sbjct: 13  QQTERWMQMALDVAKR-TPPGDVPVGAVVVDASGHVVGEGCNERESTGDPTAHAEVIALR 71

Query: 61  MGCRILSQ-EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
              R +     L    L VTLEPC MCA A   +RI  + +GA  PK G   +       
Sbjct: 72  AAAREVGDGWRLENHTLVVTLEPCVMCAGAAVTSRIGGIIFGAYEPKTGACGSVIDVVRD 131

Query: 120 ATC-HHSPEIYPGISEQRSRQIIQDFFKERR 149
                 + ++  G+ E+  + ++++FF  RR
Sbjct: 132 PAWPFPTVDVRGGVLERECQDLVEEFFARRR 162


>gi|260579466|ref|ZP_05847346.1| cytidine/deoxycytidylate deaminase family protein [Corynebacterium
           jeikeium ATCC 43734]
 gi|258602409|gb|EEW15706.1| cytidine/deoxycytidylate deaminase family protein [Corynebacterium
           jeikeium ATCC 43734]
          Length = 193

 Score =  173 bits (441), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 49/147 (33%), Positives = 70/147 (47%), Gaps = 4/147 (2%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
              M  AL+ A       ++PVGAV +  + + + R  NR     D TAHAEILAIR   
Sbjct: 49  EALMRRALDVAAETPA-GDVPVGAVILGPDGRELGRGVNRREADNDPTAHAEILAIREAV 107

Query: 64  RILSQ-EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
           + L     L +  L VTLEPC MCA A+  ARI  + +GA  P+ G   +       +  
Sbjct: 108 QELGDAWRLEDCTLVVTLEPCAMCAGALVGARIGSIIFGAYEPRTGACGSVWDVPRESPL 167

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
            H  E+  G+      ++++ FF   R
Sbjct: 168 -HWVEVRGGVLAGECEELLRQFFARLR 193


>gi|134024903|gb|AAI35110.1| Unknown (protein for IMAGE:7163502) [Danio rerio]
          Length = 241

 Score =  173 bits (441), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 49/152 (32%), Positives = 78/152 (51%), Gaps = 10/152 (6%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM--- 61
             +M+ A + A  A    E+PVG + V NN+II +  N   E K+ T HAE++A+     
Sbjct: 49  QTWMAKAFDMAVEALENGEVPVGCLMVYNNEIIGKGRNEVNETKNATRHAEMVALDQVLD 108

Query: 62  GCR---ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
            CR      +E+  +  LYVT+EPC MCAAA+ L RI  + YG  N + GG  +     +
Sbjct: 109 WCRLREKDCKEVCEQTVLYVTVEPCIMCAAALRLLRIPFVVYGCKNERFGGCGSVLDVSS 168

Query: 119 LATCHH---SPEIYPGISEQRSRQIIQDFFKE 147
                H   S +   G   + + ++++ F+K+
Sbjct: 169 D-HLPHTGTSFKCIAGYRAEEAVEMLKTFYKQ 199


>gi|113816713|gb|AAH37955.2| ADAT2 protein [Homo sapiens]
          Length = 193

 Score =  173 bits (440), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 44/154 (28%), Positives = 75/154 (48%), Gaps = 8/154 (5%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           ++   +M  A+  A+ A    E+PVG + V NN+++ +  N   + K+ T HAE++AI  
Sbjct: 22  EETEKWMEEAMHMAKEALENTEVPVGCLMVYNNEVVGKGRNEVNQTKNATRHAEMVAIDQ 81

Query: 62  GCRIL------SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
                        E+     LYVT+EPC MCAAA+ L +I  + YG  N + GG  +   
Sbjct: 82  VLDWCRQSGKSPSEVFEHTVLYVTVEPCIMCAAALRLMKIPLVVYGCQNERFGGCGSVLN 141

Query: 116 F--YTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
                L       +  PG   + + ++++ F+K+
Sbjct: 142 IASADLPNTGRPFQCIPGYRAEEAVEMLKTFYKQ 175


>gi|15828339|ref|NP_302602.1| cytidine/deoxycytidylate deaminase [Mycobacterium leprae TN]
 gi|221230816|ref|YP_002504232.1| putative cytidine/deoxycytidylate deaminase [Mycobacterium leprae
           Br4923]
 gi|13094032|emb|CAC31991.1| possible cytidine/deoxycytidylate deaminase [Mycobacterium leprae]
 gi|219933923|emb|CAR72573.1| possible cytidine/deoxycytidylate deaminase [Mycobacterium leprae
           Br4923]
          Length = 171

 Score =  173 bits (440), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 53/150 (35%), Positives = 74/150 (49%), Gaps = 3/150 (2%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIR 60
                 +  AL  A  A  R ++P+GAV +  +   ++RA N    + D TAHAEILA+R
Sbjct: 15  TTDEDLIRAALTVATTAGSR-DVPIGAVVLGADGNELARAVNAREAIGDPTAHAEILAMR 73

Query: 61  MGCRILSQ-EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
                L     L    L VT+EPCTMCA A+ LARI RL +GA  PK G + +       
Sbjct: 74  AAAGTLGNGWRLEGTTLAVTVEPCTMCAGALVLARIERLVFGAWQPKTGAVGSLWDVVRD 133

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
              +H P +  G+  Q     ++ FF  +R
Sbjct: 134 HRLNHRPAVRGGVLAQECTAPLEAFFAHQR 163


>gi|123448020|ref|XP_001312744.1| Cytidine and deoxycytidylate deaminase zinc-binding region family
           protein [Trichomonas vaginalis G3]
 gi|121894602|gb|EAX99814.1| Cytidine and deoxycytidylate deaminase zinc-binding region family
           protein [Trichomonas vaginalis G3]
          Length = 171

 Score =  173 bits (440), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 45/148 (30%), Positives = 75/148 (50%), Gaps = 4/148 (2%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           +    +M  AL+ A +A    E+ VG V + N ++I+  GN+     D T HAE++  + 
Sbjct: 16  EMHEKYMQLALKAADDAFDAGEVAVGCVIIHNGQVIASGGNQTNAKNDATRHAELVTFKH 75

Query: 62  G--CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
               R   ++IL E  LYVT EPC MCA+AI +  I R+ YG  N + GG  +    +T 
Sbjct: 76  LKESRSDYKQILKESTLYVTCEPCIMCASAIKMMGIPRVVYGCLNDRFGGCGSVYNIHTH 135

Query: 120 ATCH--HSPEIYPGISEQRSRQIIQDFF 145
                  S ++  G+  + + + ++ F+
Sbjct: 136 EIMPSLPSYDVISGVLGEEAIEALRRFY 163


>gi|333025914|ref|ZP_08453978.1| putative cytidine/deoxycytidine deaminase [Streptomyces sp. Tu6071]
 gi|332745766|gb|EGJ76207.1| putative cytidine/deoxycytidine deaminase [Streptomyces sp. Tu6071]
          Length = 163

 Score =  173 bits (440), Expect = 7e-42,   Method: Composition-based stats.
 Identities = 45/127 (35%), Positives = 65/127 (51%), Gaps = 1/127 (0%)

Query: 24  IPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEP 82
           IPVGAV +  +   ++RA N      D TAHAE+LA+R    +  +  L    L VTLEP
Sbjct: 37  IPVGAVVLDASGTELARARNEREATHDPTAHAEVLALRRAAAVRGEWRLTGCTLVVTLEP 96

Query: 83  CTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQ 142
           C MCA A++ +R+ R+ YGA +PK G   +          +H  E+  G+    S  ++ 
Sbjct: 97  CPMCAGALTQSRVERVVYGARDPKAGAAGSQWDLLRDRRLNHRAEVVEGVLAPESTALLD 156

Query: 143 DFFKERR 149
            FF   R
Sbjct: 157 AFFTATR 163


>gi|114609579|ref|XP_518775.2| PREDICTED: hypothetical protein LOC463037 isoform 2 [Pan
           troglodytes]
          Length = 191

 Score =  173 bits (440), Expect = 7e-42,   Method: Composition-based stats.
 Identities = 44/154 (28%), Positives = 75/154 (48%), Gaps = 8/154 (5%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           ++   +M  A+  A+ A    E+PVG + V NN+++ +  N   + K+ T HAE++AI  
Sbjct: 20  EETEKWMEEAMHMAKEALENTEVPVGCLMVYNNEVVGKGRNEVNQTKNATRHAEMVAIDQ 79

Query: 62  GCRIL------SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
                        E+     LYVT+EPC MCAAA+ L +I  + YG  N + GG  +   
Sbjct: 80  VLDWCRQSGKSPSEVFEHTVLYVTVEPCIMCAAALRLMKIPLVVYGCQNERFGGCGSVLN 139

Query: 116 F--YTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
                L       +  PG   + + ++++ F+K+
Sbjct: 140 IASADLPNTGRPFQCIPGYRAEEAVEMLKTFYKQ 173


>gi|124107608|ref|NP_872309.2| tRNA-specific adenosine deaminase 2 [Homo sapiens]
 gi|74750199|sp|Q7Z6V5|ADAT2_HUMAN RecName: Full=tRNA-specific adenosine deaminase 2; AltName:
           Full=Deaminase domain-containing protein 1; AltName:
           Full=tRNA-specific adenosine-34 deaminase subunit ADAT2
 gi|31652308|emb|CAD92490.1| novel protein similar to yeast and bacterial cytosine deaminase
           [Homo sapiens]
 gi|119568252|gb|EAW47867.1| deaminase domain containing 1, isoform CRA_a [Homo sapiens]
          Length = 191

 Score =  173 bits (440), Expect = 7e-42,   Method: Composition-based stats.
 Identities = 44/154 (28%), Positives = 75/154 (48%), Gaps = 8/154 (5%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           ++   +M  A+  A+ A    E+PVG + V NN+++ +  N   + K+ T HAE++AI  
Sbjct: 20  EETEKWMEEAMHMAKEALENTEVPVGCLMVYNNEVVGKGRNEVNQTKNATRHAEMVAIDQ 79

Query: 62  GCRIL------SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
                        E+     LYVT+EPC MCAAA+ L +I  + YG  N + GG  +   
Sbjct: 80  VLDWCRQSGKSPSEVFEHTVLYVTVEPCIMCAAALRLMKIPLVVYGCQNERFGGCGSVLN 139

Query: 116 F--YTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
                L       +  PG   + + ++++ F+K+
Sbjct: 140 IASADLPNTGRPFQCIPGYRAEEAVEMLKTFYKQ 173


>gi|148239680|ref|YP_001225067.1| tRNA-specific adenosine deaminase [Synechococcus sp. WH 7803]
 gi|147848219|emb|CAK23770.1| tRNA-specific adenosine deaminase [Synechococcus sp. WH 7803]
          Length = 175

 Score =  173 bits (440), Expect = 7e-42,   Method: Composition-based stats.
 Identities = 45/145 (31%), Positives = 73/145 (50%), Gaps = 1/145 (0%)

Query: 6   VFMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
            +M   L  A+      EIPV AV +    + I    NR   L D   HAE++A+R G  
Sbjct: 17  AWMQRLLNRAERVGATGEIPVAAVLLDEAGRCIGHGSNRRECLNDPLGHAELMALRQGAW 76

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
           +L    +    L VTLEPC MCA A+  AR+ ++ + A + K GG+ +        + HH
Sbjct: 77  LLGDWRMNHCTLLVTLEPCPMCAGALVQARVGQVIFAARDSKRGGLGSTINLAEHQSAHH 136

Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149
              +  G+ E+++  ++  +F++RR
Sbjct: 137 HMRVVSGVLEEQASALLAGWFRQRR 161


>gi|301753666|ref|XP_002912694.1| PREDICTED: tRNA-specific adenosine deaminase 2-like [Ailuropoda
           melanoleuca]
          Length = 192

 Score =  173 bits (440), Expect = 7e-42,   Method: Composition-based stats.
 Identities = 44/154 (28%), Positives = 76/154 (49%), Gaps = 8/154 (5%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           ++   +M  A++ A+ A    E+PVG + V NN+++ +  N   + K+ T HAE++AI  
Sbjct: 21  EETKKWMEEAMQMAKEALENIEVPVGCLMVYNNEVVGKGRNEVNQTKNATRHAEMVAIDQ 80

Query: 62  GCRILS------QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
                        E+     LYVT+EPC MCAAA+ L +I  + YG  N + GG  +   
Sbjct: 81  ALDWCHRSGKSPSEVFEHTVLYVTVEPCIMCAAALRLMKIPLVVYGCQNERFGGCGSVLN 140

Query: 116 F--YTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
                L       +  PG   + + ++++ F+K+
Sbjct: 141 IASADLPNTGRPFKCIPGYRAEEAVEMLKTFYKQ 174


>gi|240281302|gb|EER44805.1| tRNA specific adenosine deaminase [Ajellomyces capsulatus H143]
          Length = 197

 Score =  173 bits (440), Expect = 7e-42,   Method: Composition-based stats.
 Identities = 45/146 (30%), Positives = 72/146 (49%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           +K   FM  AL+  + A    E PVG V V N++      N   +  + T HAE LAI  
Sbjct: 15  QKHEYFMKKALDMGEEALASGETPVGCVLVHNDEATGSGMNDTNKSMNGTRHAEFLAIEE 74

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
             R   + I  E DLYVT+EPC MCA+A+   +IR +Y+G +N + GG       ++   
Sbjct: 75  VLRNYPRSIFRETDLYVTVEPCIMCASALRQYQIRHVYFGCANERFGGTGGVLNLHSDPG 134

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKE 147
                 +  G+  + +  +++ F+ +
Sbjct: 135 IDPPYGLTGGLFRREAIMLLRRFYIQ 160


>gi|169234864|ref|NP_001108500.1| deaminase domain containing 1 [Rattus norvegicus]
 gi|165970946|gb|AAI58617.1| Deadc1 protein [Rattus norvegicus]
          Length = 191

 Score =  173 bits (440), Expect = 7e-42,   Method: Composition-based stats.
 Identities = 43/154 (27%), Positives = 75/154 (48%), Gaps = 8/154 (5%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           ++   +M  A+  A+ A    E+PVG + V NN+++ +  N   + K+ T HAE++AI  
Sbjct: 20  QETEKWMEEAMRMAKEALENIEVPVGCLMVYNNEVVGKGRNEVNQTKNATRHAEMVAIDQ 79

Query: 62  GCRILSQE------ILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
                 +       +     LYVT+EPC MCAAA+ L +I  + YG  N + GG  +   
Sbjct: 80  VLDWCHRHGQSPSAVFEHTVLYVTVEPCIMCAAALRLMKIPLVVYGCQNERFGGCGSVLN 139

Query: 116 F--YTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
                L       +  PG   + + ++++ F+K+
Sbjct: 140 IASADLPNTGRPFQCIPGYRAEEAVELLKTFYKQ 173


>gi|148260476|ref|YP_001234603.1| CMP/dCMP deaminase, zinc-binding [Acidiphilium cryptum JF-5]
 gi|146402157|gb|ABQ30684.1| tRNA-adenosine deaminase [Acidiphilium cryptum JF-5]
          Length = 151

 Score =  173 bits (439), Expect = 8e-42,   Method: Composition-based stats.
 Identities = 57/130 (43%), Positives = 84/130 (64%), Gaps = 1/130 (0%)

Query: 21  RNEIPVGAVAVLNNK-IISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVT 79
           R E+PVGAV V     +++ AGN      D TAHAEILA+R   +    + L    L+VT
Sbjct: 14  RGEVPVGAVVVDAGGSVLAAAGNEVEARGDPTAHAEILALRAAAQRRGGKFLQGCRLFVT 73

Query: 80  LEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139
           LEPC +CAAAISL RI RL +GA +PK GG+E+G + ++  TCH+ PE+  G+ +  + +
Sbjct: 74  LEPCPLCAAAISLFRIDRLVFGAYDPKSGGVEHGPRVFSHPTCHYRPEVVGGVDQTAAAE 133

Query: 140 IIQDFFKERR 149
           +++ FF ++R
Sbjct: 134 LLRHFFSQKR 143


>gi|289422456|ref|ZP_06424299.1| tRNA-specific adenosine deaminase [Peptostreptococcus anaerobius
           653-L]
 gi|289157028|gb|EFD05650.1| tRNA-specific adenosine deaminase [Peptostreptococcus anaerobius
           653-L]
          Length = 154

 Score =  173 bits (439), Expect = 9e-42,   Method: Composition-based stats.
 Identities = 58/149 (38%), Positives = 79/149 (53%), Gaps = 1/149 (0%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M+K   FM  AL EA+ A    E P+GAV V   +I+ R  N+     +  AHAEI+AI 
Sbjct: 1   MEK-EYFMEQALVEARKAYALKETPIGAVIVYQGRIVGRGFNQVELQNNPLAHAEIMAIN 59

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              + L++  L +  +YVT+EPC MCA AI+ +RIR LY GA + K   +     F    
Sbjct: 60  DAVKNLARWRLYDCQMYVTMEPCFMCAGAIANSRIRGLYIGAGHHKNHIVTKHNDFKKEF 119

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
                     GI E+   +I+ DFFKERR
Sbjct: 120 YTDSKINFEIGILEEDCSRILVDFFKERR 148


>gi|124360458|gb|ABN08468.1| CMP/dCMP deaminase, zinc-binding [Medicago truncatula]
          Length = 178

 Score =  173 bits (439), Expect = 9e-42,   Method: Composition-based stats.
 Identities = 45/157 (28%), Positives = 80/157 (50%), Gaps = 11/157 (7%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           ++ ++FM  A+++A+ A    E+PVG V V + K+I+   NR  E ++ T HAE+ AI +
Sbjct: 4   QETHIFMELAIQQAKLAMGALEVPVGCVIVEDGKVIASGRNRTTETRNATRHAEMEAIDV 63

Query: 62  GCRILSQ---------EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN 112
                 +         +      LYVT EPC MCA+A+S   I+ ++YG SN K GG  +
Sbjct: 64  LLEQWQKNGLSMTEVAKKFSNCSLYVTCEPCIMCASALSNLGIKEVFYGCSNDKFGGCGS 123

Query: 113 GTQFYTLATC--HHSPEIYPGISEQRSRQIIQDFFKE 147
               +       +   +   GI  + +  +++ F+++
Sbjct: 124 ILSLHLSDAVSPNKGFKCAGGIMAEEAVLLLRTFYEQ 160


>gi|296166870|ref|ZP_06849287.1| tRNA-specific adenosine deaminase [Mycobacterium parascrofulaceum
           ATCC BAA-614]
 gi|295897747|gb|EFG77336.1| tRNA-specific adenosine deaminase [Mycobacterium parascrofulaceum
           ATCC BAA-614]
          Length = 152

 Score =  173 bits (439), Expect = 9e-42,   Method: Composition-based stats.
 Identities = 49/129 (37%), Positives = 70/129 (54%), Gaps = 2/129 (1%)

Query: 23  EIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQ-EILPEVDLYVTL 80
           ++P+GAV V  +   ++RA N    L D TAHAEILA+R    +L     L    L VT+
Sbjct: 22  DVPIGAVVVGADGTELARAVNAREALGDPTAHAEILALRAAAGVLGDGWRLEGATLAVTV 81

Query: 81  EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140
           EPCTMCA A+ LAR+ RL +GA  PK G + +          +H PE+  G+  +     
Sbjct: 82  EPCTMCAGALVLARVGRLVFGAWEPKTGAVGSLWDVVRDRRLNHRPEVRGGVLAEECAAP 141

Query: 141 IQDFFKERR 149
           ++ FF  +R
Sbjct: 142 LEAFFARQR 150


>gi|168039996|ref|XP_001772482.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162676279|gb|EDQ62764.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 353

 Score =  172 bits (438), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 51/169 (30%), Positives = 77/169 (45%), Gaps = 27/169 (15%)

Query: 6   VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
            FM  A  EA+ A  R E+PVG V V + ++I R  N   E ++ T HAE++AI M    
Sbjct: 167 KFMKLAFIEAREALARLEVPVGCVIVNDGEVIGRGSNCTNETRNATRHAEMVAIDMVLSK 226

Query: 66  LS-----------QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGT 114
                         E   + DLYVT EPC MCAAA+SL+  R++YYG  N + GG  +  
Sbjct: 227 WQQLSATPNVNPSTEGFQQCDLYVTCEPCIMCAAALSLSGFRKIYYGCDNERFGGCGSVL 286

Query: 115 QFYTLA----TCHHS------------PEIYPGISEQRSRQIIQDFFKE 147
             ++         H+             E   G     +  +++ F+++
Sbjct: 287 DIHSDGCAPCGLSHNEAEEHEEQKTKGFECVGGFMADEAVNLLRGFYEQ 335


>gi|213965664|ref|ZP_03393857.1| tRNA-specific adenosine deaminase [Corynebacterium amycolatum SK46]
 gi|213951615|gb|EEB63004.1| tRNA-specific adenosine deaminase [Corynebacterium amycolatum SK46]
          Length = 147

 Score =  172 bits (438), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 46/144 (31%), Positives = 72/144 (50%), Gaps = 3/144 (2%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  A+ EA +     ++PVGAV V    K++ R  NR     D  AHAE++A+R   R +
Sbjct: 1   MRLAIAEAAH-TAPGDVPVGAVVVDAEGKVVGRGSNRREADGDPLAHAEVIALREATRAV 59

Query: 67  SQ-EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
                L +  L VTLEPC MCA A  + R+ R+ +GA +PK G   +            +
Sbjct: 60  GDGWRLEQCTLVVTLEPCVMCAGACVMGRVGRVVFGAWSPKTGACGSIADVIRDPAHAFT 119

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
           P++  G+        +++FF+ +R
Sbjct: 120 PQVRGGVLADECSVYLREFFERQR 143


>gi|124023348|ref|YP_001017655.1| cytidine/deoxycytidylate deaminase [Prochlorococcus marinus str.
           MIT 9303]
 gi|123963634|gb|ABM78390.1| putative cytidine/deoxycytidylate deaminase [Prochlorococcus
           marinus str. MIT 9303]
          Length = 163

 Score =  172 bits (438), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 44/144 (30%), Positives = 75/144 (52%), Gaps = 1/144 (0%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           +M   L  A+      E+PV AV +  + + I    N+    +D   HAE++A+R    +
Sbjct: 6   WMLRLLTRAKQLGGLGEVPVSAVVLDADGRCIGHGSNQRHRGRDPLGHAELIALRQAAWL 65

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
            S     +  L VTLEPC MCA A++ AR+ ++ + A +PK GG+ +        + HH 
Sbjct: 66  RSDWRFNDCTLIVTLEPCPMCAGALTQARMGQVIFAAHDPKRGGLGSTINLGDHPSAHHK 125

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
             +  G+ E  +RQ ++ +FK++R
Sbjct: 126 MRVLGGVMEVEARQQLEAWFKQQR 149


>gi|50553008|ref|XP_503914.1| YALI0E13728p [Yarrowia lipolytica]
 gi|49649783|emb|CAG79507.1| YALI0E13728p [Yarrowia lipolytica]
          Length = 222

 Score =  172 bits (438), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 50/144 (34%), Positives = 81/144 (56%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           +  + FM  ALE+A+ +   NE+PVG V V N K+I+R  N   +    T HAE L I  
Sbjct: 6   EYHSGFMEEALEQAELSLNNNEVPVGCVFVHNGKVIARGMNDTNKSLCGTRHAEFLGIEH 65

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
             +  + +I  EVDLYVT+EPC MCA+A+   +I+ +YYG +N + GG  +    ++   
Sbjct: 66  ILKTHTADIFEEVDLYVTVEPCIMCASALRQLKIKCVYYGCANDRFGGCGSVMSIHSDKG 125

Query: 122 CHHSPEIYPGISEQRSRQIIQDFF 145
              + + YPG   + +  +++ F+
Sbjct: 126 VDPTYKAYPGFYREEAIMLLRRFY 149


>gi|238855364|ref|ZP_04645676.1| tRNA-specific adenosine deaminase [Lactobacillus jensenii 269-3]
 gi|260664920|ref|ZP_05865771.1| tRNA-adenosine deaminase [Lactobacillus jensenii SJ-7A-US]
 gi|282934594|ref|ZP_06339841.1| tRNA-specific adenosine deaminase [Lactobacillus jensenii 208-1]
 gi|238832025|gb|EEQ24350.1| tRNA-specific adenosine deaminase [Lactobacillus jensenii 269-3]
 gi|260561403|gb|EEX27376.1| tRNA-adenosine deaminase [Lactobacillus jensenii SJ-7A-US]
 gi|281301346|gb|EFA93643.1| tRNA-specific adenosine deaminase [Lactobacillus jensenii 208-1]
          Length = 176

 Score =  172 bits (438), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 44/127 (34%), Positives = 73/127 (57%), Gaps = 1/127 (0%)

Query: 24  IPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEP 82
           +P+GA+ V  + ++I R  NR       T HAEILAI   C+ L+   L +  L+VTLEP
Sbjct: 27  VPIGAIVVAPDGQVIGRGYNRRELDNIATHHAEILAINEACKNLNSWRLIDCSLFVTLEP 86

Query: 83  CTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQ 142
           C MCA AI  AR++ ++YGA + K G   +    + +   +H P++  G+  +++  ++ 
Sbjct: 87  CAMCAGAIINARLKEVFYGAPDHKAGASGSVVDLFAVEKFNHHPQVIRGLYSEKASNMLT 146

Query: 143 DFFKERR 149
           +FF+  R
Sbjct: 147 NFFRAIR 153


>gi|71892310|ref|YP_278044.1| tRNA-specific adenosine deaminase [Candidatus Blochmannia
           pennsylvanicus str. BPEN]
 gi|71796416|gb|AAZ41167.1| tRNA-specific adenosine deaminase [Candidatus Blochmannia
           pennsylvanicus str. BPEN]
          Length = 155

 Score =  172 bits (438), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 53/146 (36%), Positives = 73/146 (50%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
             ++M  A+  A +A +  EI VGAV + N K+IS   N +    D +AHAEI+A+R G 
Sbjct: 8   DTIWMRHAIALAAHAEIIGEISVGAVLIQNGKLISYGWNSSIICHDPSAHAEIVALRTGG 67

Query: 64  RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123
           ++L    L    LYVTLEPC MC  AI  AR+ RL  GA N K                +
Sbjct: 68  KVLGNYRLLGTTLYVTLEPCMMCIGAIIHARVYRLVCGAKNSKTEQRSWLKNTLRHPMNN 127

Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149
           H   +  G+ E+     +  FFK +R
Sbjct: 128 HHVFLTTGVLEKECAYQLNKFFKRQR 153


>gi|119026595|ref|YP_910440.1| cytidine and deoxycytidylate deaminase [Bifidobacterium
           adolescentis ATCC 15703]
 gi|118766179|dbj|BAF40358.1| possible cytidine and deoxycytidylate deaminase [Bifidobacterium
           adolescentis ATCC 15703]
          Length = 157

 Score =  172 bits (437), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 43/129 (33%), Positives = 60/129 (46%), Gaps = 1/129 (0%)

Query: 22  NEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80
            E+PVGAV +  + ++I R  N      D  AHAE+ A+      L    L +  L VTL
Sbjct: 29  GEVPVGAVVLAADGRVIGRGRNLRETHADPLAHAEVKAMAEAAASLDTWNLADCTLVVTL 88

Query: 81  EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140
           EPC MCA A     I R+ +GA + K G   +             PE+  G+ E    ++
Sbjct: 89  EPCPMCAGACLQTHIGRIVFGAWDAKLGACGSVWDIPRDPHVGLVPEVIGGVREAECGRL 148

Query: 141 IQDFFKERR 149
           + DFF  RR
Sbjct: 149 MTDFFARRR 157


>gi|313472533|ref|ZP_07813023.1| cytidine/deoxycytidylate deaminase family protein [Lactobacillus
           jensenii 1153]
 gi|313448996|gb|EEQ68969.2| cytidine/deoxycytidylate deaminase family protein [Lactobacillus
           jensenii 1153]
          Length = 160

 Score =  172 bits (437), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 44/127 (34%), Positives = 73/127 (57%), Gaps = 1/127 (0%)

Query: 24  IPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEP 82
           +P+GA+ V  + ++I R  NR       T HAEILAI   C+ L+   L +  L+VTLEP
Sbjct: 27  VPIGAIVVAPDGQVIGRGYNRRELDNIATHHAEILAINEACKNLNSWRLIDCSLFVTLEP 86

Query: 83  CTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQ 142
           C MCA AI  AR++ ++YGA + K G   +    + +   +H P++  G+  +++  ++ 
Sbjct: 87  CAMCAGAIINARLKEVFYGAPDHKAGASGSVVDLFAVEKFNHHPQVIRGLYSEKASNMLT 146

Query: 143 DFFKERR 149
           +FF+  R
Sbjct: 147 NFFRAIR 153


>gi|269793794|ref|YP_003313249.1| tRNA-adenosine deaminase [Sanguibacter keddieii DSM 10542]
 gi|269095979|gb|ACZ20415.1| tRNA-adenosine deaminase [Sanguibacter keddieii DSM 10542]
          Length = 147

 Score =  172 bits (437), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 47/150 (31%), Positives = 66/150 (44%), Gaps = 15/150 (10%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVL--------NNKIISRAGNRNRELKDVTAHAEILAI 59
           M  A++EA+ A    ++                +  +I R  N      D TAHAE+LA+
Sbjct: 1   MGLAIDEARLALETGDV-------PVGAVVVGPDGTVIGRGHNAREAAGDPTAHAEVLAL 53

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
           R   + L +  L    L VTLEPC MCA A  LAR+ RL  GA + K G   +       
Sbjct: 54  REAAQTLGEWRLTGCTLVVTLEPCVMCAGATMLARVPRLVLGAWDDKAGATGSMWDLVRD 113

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
               H  E+  G+ E     ++ DFF + R
Sbjct: 114 RRSTHRVEVVGGVREAECAALLLDFFADHR 143


>gi|258543612|ref|YP_003189045.1| CMP/dCMP deaminase [Acetobacter pasteurianus IFO 3283-01]
 gi|256634690|dbj|BAI00666.1| CMP/dCMP deaminase [Acetobacter pasteurianus IFO 3283-01]
 gi|256637746|dbj|BAI03715.1| CMP/dCMP deaminase [Acetobacter pasteurianus IFO 3283-03]
 gi|256640800|dbj|BAI06762.1| CMP/dCMP deaminase [Acetobacter pasteurianus IFO 3283-07]
 gi|256643855|dbj|BAI09810.1| CMP/dCMP deaminase [Acetobacter pasteurianus IFO 3283-22]
 gi|256646910|dbj|BAI12858.1| CMP/dCMP deaminase [Acetobacter pasteurianus IFO 3283-26]
 gi|256649963|dbj|BAI15904.1| CMP/dCMP deaminase [Acetobacter pasteurianus IFO 3283-32]
 gi|256652953|dbj|BAI18887.1| CMP/dCMP deaminase [Acetobacter pasteurianus IFO 3283-01-42C]
 gi|256656007|dbj|BAI21934.1| CMP/dCMP deaminase [Acetobacter pasteurianus IFO 3283-12]
          Length = 151

 Score =  172 bits (437), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 51/131 (38%), Positives = 84/131 (64%), Gaps = 1/131 (0%)

Query: 20  LRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYV 78
              E+PVGAV +  N  ++++AGNR  EL+D +AHAE+L +R   +    + L +  L+V
Sbjct: 19  ENGEVPVGAVLLDSNGNVLAQAGNRVEELRDPSAHAEMLVMREAVQQRQGQKLADCTLFV 78

Query: 79  TLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSR 138
           +LEPC MCAAA++  R+ R+ +GA +PKGGG+E+G +        H  E+  G+ EQ + 
Sbjct: 79  SLEPCPMCAAAMAHFRLGRVVFGAYDPKGGGVEHGARLPYRPETLHRMEVIGGVREQEAA 138

Query: 139 QIIQDFFKERR 149
           ++++ FF++ R
Sbjct: 139 EMLKAFFQKLR 149


>gi|109072525|ref|XP_001091638.1| PREDICTED: tRNA-specific adenosine deaminase 2 isoform 1 [Macaca
           mulatta]
          Length = 191

 Score =  172 bits (437), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 46/154 (29%), Positives = 77/154 (50%), Gaps = 8/154 (5%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           ++   +M  A+  A+ A    E+PVG + V NN+++ +  N   + K+ T HAE++AI  
Sbjct: 20  EETEKWMEEAMHMAKEALENTEVPVGCLMVYNNEVVGKGRNEVNQTKNATRHAEMVAIDQ 79

Query: 62  ---GCRILS---QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
               CR       E+     LYVT+EPC MCAAA+ L +I  + YG  N + GG  +   
Sbjct: 80  VLDWCRRSGKSPSEVFEHTVLYVTVEPCIMCAAALRLMKIPLVVYGCQNERFGGCGSVLN 139

Query: 116 F--YTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
                L       +  PG   + + ++++ F+K+
Sbjct: 140 IASADLPNTGRPFQCIPGYRAEEAVEMLKTFYKQ 173


>gi|220934212|ref|YP_002513111.1| tRNA-specific adenosine deaminase [Thioalkalivibrio sp. HL-EbGR7]
 gi|219995522|gb|ACL72124.1| tRNA-specific adenosine deaminase [Thioalkalivibrio sp. HL-EbGR7]
          Length = 162

 Score =  172 bits (437), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 53/148 (35%), Positives = 76/148 (51%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
            +   +M  ALE A  A    E+PVGAV V + +++    N      D TAHAEI A+R 
Sbjct: 10  DEDQHWMRHALELAARAEAAGEVPVGAVLVRDGELLGEGCNGPIAAHDPTAHAEIAALRA 69

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
               +    LP   LYVTLEPC MC  A+  AR+ RL YGA++PK G +          +
Sbjct: 70  AAARVGNYRLPGATLYVTLEPCPMCVGAMIHARVARLVYGAADPKTGAVGGALDLLGHPS 129

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H  E+  G+  +   + ++ FF+ RR
Sbjct: 130 HNHRIEVTGGVLAETCAEQLRAFFRTRR 157


>gi|114327121|ref|YP_744278.1| tRNA-specific adenosine deaminase [Granulibacter bethesdensis
           CGDNIH1]
 gi|114315295|gb|ABI61355.1| tRNA-specific adenosine deaminase [Granulibacter bethesdensis
           CGDNIH1]
          Length = 178

 Score =  172 bits (437), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 58/128 (45%), Positives = 81/128 (63%), Gaps = 1/128 (0%)

Query: 23  EIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81
           E+PVGAV +     ++++A N      D +AHAE+LA+R   + L    L   DLYVTLE
Sbjct: 51  EVPVGAVVISPEGYLLAQAHNLTEANHDASAHAEMLAMREAAKRLGSTRLIGCDLYVTLE 110

Query: 82  PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141
           PC MCA A S  RIRR+ +GA +PKGGGIE+G +    ++CHH PEI  G+ E  +  ++
Sbjct: 111 PCPMCAQAASHFRIRRIIFGAYDPKGGGIEHGARVLNASSCHHQPEIIGGVRETEAVALL 170

Query: 142 QDFFKERR 149
           + FF+ RR
Sbjct: 171 RSFFQARR 178


>gi|83591989|ref|YP_425741.1| tRNA-adenosine deaminase [Rhodospirillum rubrum ATCC 11170]
 gi|83574903|gb|ABC21454.1| tRNA-adenosine deaminase [Rhodospirillum rubrum ATCC 11170]
          Length = 159

 Score =  172 bits (436), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 53/129 (41%), Positives = 77/129 (59%), Gaps = 1/129 (0%)

Query: 22  NEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80
            E+PVGAV      + ++   NR     D TAHAEILAIR  C       LP+  L+VTL
Sbjct: 31  GEVPVGAVITDAGGRPLAACANRTETDHDPTAHAEILAIRAACARRGDARLPDCTLWVTL 90

Query: 81  EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140
           EPC MCA+AI  AR+ R+ +GA +PKGG +++G + +    C H PE+  G++E  +  +
Sbjct: 91  EPCPMCASAIVHARLARVIFGAYDPKGGAVDHGVRLFAHPGCLHRPEVIGGMAESAAATL 150

Query: 141 IQDFFKERR 149
           ++ FF+  R
Sbjct: 151 LRGFFQALR 159


>gi|78184835|ref|YP_377270.1| cytidine/deoxycytidylate deaminase family protein [Synechococcus
           sp. CC9902]
 gi|78169129|gb|ABB26226.1| tRNA-adenosine deaminase [Synechococcus sp. CC9902]
          Length = 147

 Score =  172 bits (436), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 47/143 (32%), Positives = 72/143 (50%), Gaps = 1/143 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M   L+ AQ   L  E+PV AV +  N + I    NR    +D   HAE++A++    +L
Sbjct: 1   MKVLLQRAQVNGLSGEVPVAAVVLDANGRAIGHGRNRRETKQDPLGHAELVALQQAALVL 60

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
                 +  L VTLEPC MCA A+  AR+  + +GA + K GG+       T  + HH  
Sbjct: 61  GDWRFNQCCLIVTLEPCPMCAGALVQARMGTVVFGAHDRKRGGLGGTMNLATHTSAHHKM 120

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
            +  G+ E  +   ++ +FK+RR
Sbjct: 121 TVIGGVMEAEASTQLEQWFKQRR 143


>gi|311741106|ref|ZP_07714931.1| cytidine and deoxycytidylate deaminase [Corynebacterium
           pseudogenitalium ATCC 33035]
 gi|311303908|gb|EFQ79986.1| cytidine and deoxycytidylate deaminase [Corynebacterium
           pseudogenitalium ATCC 33035]
          Length = 143

 Score =  172 bits (436), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 50/144 (34%), Positives = 72/144 (50%), Gaps = 3/144 (2%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  AL+ A+ A    ++PVGAV        ++   NR  EL D TAHAE+ AIR   R+ 
Sbjct: 1   MRRALDVAKRAPA-GDVPVGAVLYDAAGTELATGVNRREELADPTAHAEVEAIRQAVRVH 59

Query: 67  SQ-EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
                L   +L VTLEPC MCA A+  AR+  + +GA  PK G   +        T   +
Sbjct: 60  GDGWRLSGCELVVTLEPCAMCAGALQAARVSSVVFGAFEPKTGACGSLIDVLRAPTAPFT 119

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
           P++  G+ E     ++++FF   R
Sbjct: 120 PQVRGGVLEGECAGLLRNFFDGLR 143


>gi|254474984|ref|ZP_05088370.1| cytosine deaminase [Ruegeria sp. R11]
 gi|214029227|gb|EEB70062.1| cytosine deaminase [Ruegeria sp. R11]
          Length = 152

 Score =  172 bits (436), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 74/143 (51%), Positives = 99/143 (69%), Gaps = 1/143 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGA-VAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  AL EA+ AA R E+PVGA +   +  ++++AGNR REL D TAHAE+L IR  C  +
Sbjct: 7   MDVALSEARAAAERGEVPVGAALIAPDGTVVAQAGNRTRELSDPTAHAEVLVIREACAAI 66

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
             E L   DLYVTLEPC MCAAAI+ ARIRR+YYGAS+PK GG+ +G   ++    HH+P
Sbjct: 67  GSERLNGYDLYVTLEPCAMCAAAIAAARIRRVYYGASDPKSGGVAHGACVFSHPQAHHAP 126

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+Y GIS   + ++++DFF  +R
Sbjct: 127 EVYEGISAAPAERLLRDFFAAKR 149


>gi|85057886|ref|YP_456802.1| cytosine deaminase [Aster yellows witches'-broom phytoplasma AYWB]
 gi|42632638|gb|AAS22250.1| cytosine deaminase [Aster yellows witches'-broom phytoplasma]
 gi|84789991|gb|ABC65723.1| cytosine deaminase [Aster yellows witches'-broom phytoplasma AYWB]
          Length = 161

 Score =  171 bits (435), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 60/148 (40%), Positives = 82/148 (55%), Gaps = 1/148 (0%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           ++   FM  AL+EAQ A L+ E+P+GA+AVLN KII+RA N     K    HAE LA+  
Sbjct: 6   QQHIFFMKEALKEAQKAYLKEEVPIGAIAVLNQKIIARAHNNRNTKKLFFGHAEFLALIK 65

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
             + ++   L +V LYVTLEPC MC  AI  A I+ LYYG S  K     + +    +  
Sbjct: 66  AGKKINSRFLNDVSLYVTLEPCLMCTGAIIQAGIKNLYYGTSIEKSYSFNDMSSIQNMPF 125

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
                 I  G+  Q S Q+++ FF+E R
Sbjct: 126 MD-KLNIQSGLLAQESIQLLKKFFQELR 152


>gi|33862872|ref|NP_894432.1| putative cytidine/deoxycytidylate deaminase [Prochlorococcus
           marinus str. MIT 9313]
 gi|33634788|emb|CAE20774.1| putative cytidine/deoxycytidylate deaminase [Prochlorococcus
           marinus str. MIT 9313]
          Length = 163

 Score =  171 bits (435), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 44/144 (30%), Positives = 75/144 (52%), Gaps = 1/144 (0%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           +M   L  A+      E+PV AV +  + + I    N+    +D   HAE++A+R    +
Sbjct: 6   WMLRLLTRAKQLGDFGEVPVSAVVLDADGRCIGHGSNQRHRRRDPLGHAELIALRQAAWL 65

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
            S     +  L VTLEPC MCA A++ AR+ ++ + A +PK GG+ +        + HH 
Sbjct: 66  RSDWRFNDCTLIVTLEPCPMCAGALTQARMGQVIFAAHDPKRGGLGSTIHLGEHPSAHHK 125

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
             +  G+ E  +RQ ++ +FK++R
Sbjct: 126 MRVLGGVMEVEARQQLEAWFKQQR 149


>gi|85375364|ref|YP_459426.1| nitrogen fixation protein [Erythrobacter litoralis HTCC2594]
 gi|84788447|gb|ABC64629.1| nitrogen fixation protein [Erythrobacter litoralis HTCC2594]
          Length = 142

 Score =  171 bits (435), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 74/142 (52%), Positives = 94/142 (66%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  ALEEA+ AA   E+P+GAV V   K+I  A N  R   D TAHAEI AIR   + L 
Sbjct: 1   MRLALEEARKAADAGEVPIGAVVVKGEKVIVAAHNSPRTDHDPTAHAEIAAIRAAAKALG 60

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
           QE L   DL+VTLEPC MCA AIS ARI RLYY AS+PKGG +E+G + +  + C H+PE
Sbjct: 61  QERLEGCDLWVTLEPCAMCAGAISHARIARLYYAASDPKGGAVEHGAKVFDHSQCLHAPE 120

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
           +Y G+ E  +  +++ FF+ERR
Sbjct: 121 VYSGMGEDEAADMLRGFFRERR 142


>gi|260909419|ref|ZP_05916126.1| cytidine/deoxycytidylate deaminase [Prevotella sp. oral taxon 472
           str. F0295]
 gi|260636435|gb|EEX54418.1| cytidine/deoxycytidylate deaminase [Prevotella sp. oral taxon 472
           str. F0295]
          Length = 155

 Score =  171 bits (435), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 55/146 (37%), Positives = 78/146 (53%), Gaps = 5/146 (3%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
               M  AL EAQ A  + E+P+GAV     ++++RA N    L DVTAHAE+ AI    
Sbjct: 14  DEQMMRKALAEAQQALAQGEVPIGAVIACKGRVVARAHNLTETLCDVTAHAEMQAITAAA 73

Query: 64  RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123
            +L  + LPE  LYVT+EPC MCA A   A++ R+ YG  + K G      + +     H
Sbjct: 74  NMLGGKYLPECTLYVTVEPCPMCAGACGWAQLGRIVYGTRDEKRG-----YERFAPNVLH 128

Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149
               +  G+ E+  RQ+++DFF   R
Sbjct: 129 AKATVTAGVLEEECRQLMKDFFSGLR 154


>gi|318041317|ref|ZP_07973273.1| cytidine/deoxycytidylate deaminase family protein [Synechococcus
           sp. CB0101]
          Length = 178

 Score =  171 bits (435), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 43/145 (29%), Positives = 71/145 (48%), Gaps = 1/145 (0%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRM 61
           +  ++M   L  A+      EIPV AV +    + +    NR    +    HAE++A++ 
Sbjct: 13  EHILWMQRLLRRAEAVGCEGEIPVAAVVLDAQGRAVGWGSNRRERDQQPLGHAELMALQQ 72

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
             R+       +  L VTLEPC MCA A+  AR+ ++ +GA +PK GG+       T  +
Sbjct: 73  AARLRGDWRFNDCTLLVTLEPCPMCAGALVQARVGQVVFGAHDPKRGGLGGVLDLSTSPS 132

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFK 146
            HHS  +  G+  +R    ++ +FK
Sbjct: 133 AHHSMLVVGGVEAERCATQLERWFK 157


>gi|21322992|dbj|BAB97621.1| Cytosine/adenosine deaminases [Corynebacterium glutamicum ATCC
           13032]
          Length = 139

 Score =  171 bits (435), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 47/131 (35%), Positives = 67/131 (51%), Gaps = 2/131 (1%)

Query: 21  RNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQ-EILPEVDLYV 78
             ++PVGAV      +I++ A NR    +D TAHAEI+A+R   R  S    L +    V
Sbjct: 9   EGDVPVGAVIYAPTGEILATATNRREADRDPTAHAEIIALRRAARRFSDGWRLSDCTAVV 68

Query: 79  TLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSR 138
           TLEPC+MCA A+  ARI R+ +GA  P+ G   +           H  E+  GI E    
Sbjct: 69  TLEPCSMCAGALVGARIGRIVFGAFEPRTGACGSVFDVVRDPAVLHKVEVSGGILEPECA 128

Query: 139 QIIQDFFKERR 149
            ++ +FF+  R
Sbjct: 129 ALMTEFFELHR 139


>gi|323507722|emb|CBQ67593.1| related to TAD2-tRNA-specific adenosine deaminase 2 [Sporisorium
            reilianum]
          Length = 1276

 Score =  171 bits (435), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 49/162 (30%), Positives = 72/162 (44%), Gaps = 18/162 (11%)

Query: 2    KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
            ++   +M  AL  AQ A   NE+PVG V V   ++I+R  NR  EL + T HAE+ AI  
Sbjct: 940  EEDLKWMREALAMAQEALEANEVPVGGVFVRKGQVIARGRNRTNELLNATRHAELEAIDH 999

Query: 62   GCRIL----------------SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNP 105
               I+                      +  LYVT+EPC MC AA+    I R+ +GA N 
Sbjct: 1000 ILSIMPPSAPDFAVAPHSGPEGDNPFKDTTLYVTIEPCIMCGAALRQIGIGRVVFGAGNE 1059

Query: 106  KGGGIENGTQFYTLATCHHSP--EIYPGISEQRSRQIIQDFF 145
            + GG  +    +       SP  E   G     +  +++ F+
Sbjct: 1060 RFGGNGSVLGLHDDDAIVSSPGYESVGGYLRDEAIMMLRRFY 1101


>gi|302530974|ref|ZP_07283316.1| cytidine and deoxycytidylate deaminase [Streptomyces sp. AA4]
 gi|302439869|gb|EFL11685.1| cytidine and deoxycytidylate deaminase [Streptomyces sp. AA4]
          Length = 155

 Score =  171 bits (435), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 53/143 (37%), Positives = 77/143 (53%), Gaps = 4/143 (2%)

Query: 9   SCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
             AL+ A+      ++P+GAV    + + ++ A N   EL D TAHAEILA+R   R   
Sbjct: 11  RAALDAARAPGA--DVPIGAVVFDPDGRPLAAARNARVELADPTAHAEILALRAAAREFG 68

Query: 68  Q-EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L    L VTLEPCTMCA A+ LAR+ RL +GA  PK G + +          +H P
Sbjct: 69  DGWRLEGCTLAVTLEPCTMCAGALVLARVARLVFGAWEPKTGAVSSLWDVVRDRRLNHRP 128

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E++ G+ E     +++ +F +RR
Sbjct: 129 EVHGGVLESDCAALLEAYFADRR 151


>gi|58268162|ref|XP_571237.1| tRNA specific adenosine deaminase [Cryptococcus neoformans var.
           neoformans JEC21]
 gi|134113420|ref|XP_774735.1| hypothetical protein CNBF4140 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|50257379|gb|EAL20088.1| hypothetical protein CNBF4140 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|57227472|gb|AAW43930.1| tRNA specific adenosine deaminase, putative [Cryptococcus
           neoformans var. neoformans JEC21]
          Length = 239

 Score =  171 bits (434), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 45/140 (32%), Positives = 67/140 (47%), Gaps = 3/140 (2%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  AL  A+ A   +E+PVG V V   + I+RA NR  E ++ T HAE+ AI        
Sbjct: 1   MREALIMAEEALTNDEVPVGCVFVKGGQAIARARNRTNEWRNATLHAELEAIDHLLPSHP 60

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC--HHS 125
              L  + LYVT+EPC MCA+A+    I R+ YG  N + GG  +            H +
Sbjct: 61  AP-LSTITLYVTVEPCVMCASALRQVGIGRVVYGCGNDRFGGCGSVIPVNNSPRLDSHPA 119

Query: 126 PEIYPGISEQRSRQIIQDFF 145
                G   + +  +++ F+
Sbjct: 120 YVAVGGFYREEAIMLLRRFY 139


>gi|283457044|ref|YP_003361608.1| tRNA-specific adenosine deaminase [Bifidobacterium dentium Bd1]
 gi|283103678|gb|ADB10784.1| MesJ tRNA-specific adenosine deaminase [Bifidobacterium dentium
           Bd1]
          Length = 145

 Score =  171 bits (434), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 43/129 (33%), Positives = 61/129 (47%), Gaps = 1/129 (0%)

Query: 22  NEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80
            E+PVGAV +    ++I R  N     +D  AHAE+ A+      L    L +  L VTL
Sbjct: 15  GEVPVGAVVLDAAGQVIGRGRNLREADRDPLAHAEVKAMTEAAHALGTWNLADCTLIVTL 74

Query: 81  EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140
           EPC MCA A     I R+ +GA + K G   +             PE+  G+ E    +I
Sbjct: 75  EPCPMCAGACLQTHIGRIVFGAWDAKLGACGSVWDIPRDPHIGSVPEVIGGMHESECARI 134

Query: 141 IQDFFKERR 149
           + DFF ++R
Sbjct: 135 LTDFFTDKR 143


>gi|183985263|ref|YP_001853554.1| cytidine/deoxycytidylate deaminase [Mycobacterium marinum M]
 gi|183178589|gb|ACC43699.1| cytidine/deoxycytidylate deaminase [Mycobacterium marinum M]
          Length = 152

 Score =  171 bits (434), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 50/129 (38%), Positives = 73/129 (56%), Gaps = 2/129 (1%)

Query: 23  EIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQ-EILPEVDLYVTL 80
           ++P+GAV +  +   ++RA N   EL D TAHAEILA+R   R+L     L    L VT+
Sbjct: 22  DVPIGAVVISADGTELARAVNAREELGDPTAHAEILALRAAARVLGDGWRLEGATLAVTV 81

Query: 81  EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140
           EPCTMCA A+ LAR+ RL +GA  PK G + +          +H P++  G+  Q     
Sbjct: 82  EPCTMCAGALVLARVARLVFGAWEPKTGAVGSLWDVVRDRRLNHRPQVRGGVLAQECAAP 141

Query: 141 IQDFFKERR 149
           +++FF  +R
Sbjct: 142 LEEFFGRQR 150


>gi|73667189|ref|YP_303205.1| cytidine/deoxycytidylate deaminase, zinc-binding region [Ehrlichia
           canis str. Jake]
 gi|72394330|gb|AAZ68607.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [Ehrlichia
           canis str. Jake]
          Length = 139

 Score =  171 bits (434), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 77/142 (54%), Positives = 99/142 (69%), Gaps = 4/142 (2%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  A+ +AQ     +E+PVGAV V N+++IS + N N +  D TAHAEILAIR  C+ILS
Sbjct: 1   MKLAISKAQE--DLSEVPVGAVIVYNDEVISSSNNSNIQNTDPTAHAEILAIREACKILS 58

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
            +IL + D+YVTLEPC MCA AIS A++RRLY+GA N K G IENG + +    CHH PE
Sbjct: 59  TQILDQCDIYVTLEPCAMCAQAISFAKLRRLYFGAYNKKYGAIENGARIFQF--CHHVPE 116

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
           IY GI E  + ++I DFFK+ R
Sbjct: 117 IYGGILENENIKLITDFFKKLR 138


>gi|161784292|sp|Q5RIV4|ADAT2_DANRE RecName: Full=tRNA-specific adenosine deaminase 2; AltName:
           Full=Deaminase domain-containing protein 1; AltName:
           Full=tRNA-specific adenosine-34 deaminase subunit ADAT2
          Length = 214

 Score =  171 bits (434), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 49/151 (32%), Positives = 78/151 (51%), Gaps = 8/151 (5%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM--- 61
             +M+ A + A  A    E+PVG + V NN+II +  N   E K+ T HAE++A+     
Sbjct: 22  QTWMAKAFDMAVEALENGEVPVGCLMVYNNEIIGKGRNEVNETKNATRHAEMVALDQVLD 81

Query: 62  GCR---ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
            CR      +E+  +  LYVT+EPC MCAAA+ L RI  + YG  N + GG  +     +
Sbjct: 82  WCRLREKDCKEVCEQTVLYVTVEPCIMCAAALRLLRIPFVVYGCKNERFGGCGSVLDVSS 141

Query: 119 LATCH--HSPEIYPGISEQRSRQIIQDFFKE 147
               H   S +   G   + + ++++ F+K+
Sbjct: 142 DHLPHTGTSFKCIAGYRAEEAVEMLKTFYKQ 172


>gi|171741935|ref|ZP_02917742.1| hypothetical protein BIFDEN_01034 [Bifidobacterium dentium ATCC
           27678]
 gi|306824050|ref|ZP_07457423.1| tRNA(Ile)-lysidine synthase (tRNA(Ile)-lysidinesynthetase)
           [Bifidobacterium dentium ATCC 27679]
 gi|309800761|ref|ZP_07694896.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Bifidobacterium dentium JCVIHMP022]
 gi|171277549|gb|EDT45210.1| hypothetical protein BIFDEN_01034 [Bifidobacterium dentium ATCC
           27678]
 gi|304552703|gb|EFM40617.1| tRNA(Ile)-lysidine synthase (tRNA(Ile)-lysidinesynthetase)
           [Bifidobacterium dentium ATCC 27679]
 gi|308222606|gb|EFO78883.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Bifidobacterium dentium JCVIHMP022]
          Length = 151

 Score =  171 bits (434), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 43/129 (33%), Positives = 61/129 (47%), Gaps = 1/129 (0%)

Query: 22  NEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80
            E+PVGAV +    ++I R  N     +D  AHAE+ A+      L    L +  L VTL
Sbjct: 21  GEVPVGAVVLDAAGQVIGRGRNLREADRDPLAHAEVKAMTEAAHALGTWNLADCTLIVTL 80

Query: 81  EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140
           EPC MCA A     I R+ +GA + K G   +             PE+  G+ E    +I
Sbjct: 81  EPCPMCAGACLQTHIGRIVFGAWDAKLGACGSVWDIPRDPHIGSVPEVIGGMHESECARI 140

Query: 141 IQDFFKERR 149
           + DFF ++R
Sbjct: 141 LTDFFTDKR 149


>gi|254281607|ref|ZP_04956575.1| tRNA-specific adenosine deaminase [gamma proteobacterium NOR51-B]
 gi|219677810|gb|EED34159.1| tRNA-specific adenosine deaminase [gamma proteobacterium NOR51-B]
          Length = 164

 Score =  171 bits (434), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 56/139 (40%), Positives = 72/139 (51%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
               MS ALE+A  AA + E+PVGAV V++ K+++ AGN      D TAHAEILA+R   
Sbjct: 8   DREMMSLALEKAAMAAAQGEVPVGAVVVMDGKVVATAGNGQIGDCDPTAHAEILALRDAA 67

Query: 64  RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123
           R +    L    LY TLEPCTMC  A+  ARI RL YGA  PK G + +          +
Sbjct: 68  RAIRNYRLAGATLYATLEPCTMCCGALVHARIGRLVYGALEPKAGAVVSTGAALDNPALN 127

Query: 124 HSPEIYPGISEQRSRQIIQ 142
           H      G+    S   + 
Sbjct: 128 HRVTHAGGLLADESAMQLS 146


>gi|321260564|ref|XP_003195002.1| tRNA specific adenosine deaminase [Cryptococcus gattii WM276]
 gi|317461474|gb|ADV23215.1| tRNA specific adenosine deaminase, putative [Cryptococcus gattii
           WM276]
          Length = 239

 Score =  170 bits (433), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 45/140 (32%), Positives = 67/140 (47%), Gaps = 3/140 (2%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  AL  A+ A   +E+PVG V V   + I+RA NR  E ++ T HAE+ AI        
Sbjct: 1   MREALIMAEEALSNDEVPVGCVFVKGGQAIARARNRTNEWRNATLHAELEAIDHLLPSHP 60

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC--HHS 125
              L  + LYVT+EPC MCA+A+    I R+ YG  N + GG  +            H +
Sbjct: 61  AP-LSTITLYVTVEPCVMCASALRQVGIGRVVYGCGNDRFGGCGSVIPVNNSPRLDSHPA 119

Query: 126 PEIYPGISEQRSRQIIQDFF 145
                G   + +  +++ F+
Sbjct: 120 YVAVGGFYREEAIMLLRRFY 139


>gi|330817316|ref|YP_004361021.1| CMP/dCMP deaminase, zinc-binding protein [Burkholderia gladioli
           BSR3]
 gi|327369709|gb|AEA61065.1| CMP/dCMP deaminase, zinc-binding protein [Burkholderia gladioli
           BSR3]
          Length = 217

 Score =  170 bits (433), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 51/144 (35%), Positives = 75/144 (52%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           ++   +M  AL  A+ A    E+PVGAV V  +++I+R  N      D +AHAE+ A+R 
Sbjct: 32  ERDRRYMRMALAAAEAARAAGEVPVGAVIVRGDEVIARGFNHPIGGHDPSAHAEMAALRA 91

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
             + L    LP  +LYVTLEPC MC+ AI  ARI R+ YGA +PK G        +    
Sbjct: 92  AAQALGNYRLPGCELYVTLEPCLMCSGAIMHARIARVVYGAPDPKTGACGGVVDAFANPQ 151

Query: 122 CHHSPEIYPGISEQRSRQIIQDFF 145
            +H   +  G+  +     ++ FF
Sbjct: 152 LNHHTSVTGGVLAEECGDALRSFF 175


>gi|295698536|ref|YP_003603191.1| tRNA-specific adenosine deaminase [Candidatus Riesia pediculicola
           USDA]
 gi|291157478|gb|ADD79923.1| tRNA-specific adenosine deaminase [Candidatus Riesia pediculicola
           USDA]
          Length = 171

 Score =  170 bits (433), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 52/157 (33%), Positives = 83/157 (52%), Gaps = 13/157 (8%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +KK   +M+ +L+ A+ + +  EIP+GAV +  + I++ +GN      D +AHAEI+ IR
Sbjct: 12  LKKDFFWMNKSLDLAKKSEILGEIPIGAVLIYQDNIVASSGNEVILRNDPSAHAEIIVIR 71

Query: 61  MGCRILSQEILPE-VDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
            G +      L E + +YVT+ PC MC  AI  +RI R+ YG+ N K     N   F+  
Sbjct: 72  EGAKHFKNYRLKENLTIYVTIFPCIMCMGAIFQSRISRVVYGSENYK-----NNLSFFLF 126

Query: 120 ATCH-------HSPEIYPGISEQRSRQIIQDFFKERR 149
              +           +Y GI  +    I+++FFK+RR
Sbjct: 127 EKNNTNISMNYGHITVYGGILSRSCSSILKNFFKKRR 163


>gi|300780042|ref|ZP_07089898.1| cytidine and deoxycytidylate deaminase [Corynebacterium genitalium
           ATCC 33030]
 gi|300534152|gb|EFK55211.1| cytidine and deoxycytidylate deaminase [Corynebacterium genitalium
           ATCC 33030]
          Length = 151

 Score =  170 bits (433), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 48/141 (34%), Positives = 71/141 (50%), Gaps = 2/141 (1%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  A+E A+      +IPVGAV    + + I+   NR    +D   HAE++  R   + L
Sbjct: 1   MRRAIEVART-TPIGDIPVGAVLYGPDGEEIATGTNRRETDRDPVGHAEVVVTRKAAQAL 59

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L   +L VTLEPCTMCA AI  AR++ L +GA  PK G + +           H+ 
Sbjct: 60  GTWRLDGCELVVTLEPCTMCAGAILGARVQSLVFGAYEPKTGAVGSLIDVLRDPPHLHTV 119

Query: 127 EIYPGISEQRSRQIIQDFFKE 147
           E+  G+ E  +  +++DFF  
Sbjct: 120 EVRGGVLETETASLMRDFFAR 140


>gi|289640846|ref|ZP_06473017.1| CMP/dCMP deaminase zinc-binding [Frankia symbiont of Datisca
           glomerata]
 gi|289509422|gb|EFD30350.1| CMP/dCMP deaminase zinc-binding [Frankia symbiont of Datisca
           glomerata]
          Length = 157

 Score =  170 bits (433), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 43/144 (29%), Positives = 65/144 (45%), Gaps = 3/144 (2%)

Query: 1   MKKGNVFMSCALEEAQNAAL--RNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEIL 57
           M K   +M  ALE A+        + PVGAV    + + I+ A +  +   D TAHAEI 
Sbjct: 1   MAKYEPWMRRALEMARALPDPGAGDPPVGAVIYGPDGREITAAHHDRQRTADPTAHAEIT 60

Query: 58  AIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFY 117
            +R   R L    L    L  TLEP  M A A+ LAR+ RL  G+ + + G + +     
Sbjct: 61  VLRRAGRALGTWKLDGCTLVTTLEPGVMAAGAVVLARMPRLVIGSWDERNGAVCSQWDLV 120

Query: 118 TLATCHHSPEIYPGISEQRSRQII 141
                +H  E+ P + +     ++
Sbjct: 121 RDPRLNHFVEVIPEVLKAECDALL 144


>gi|90419974|ref|ZP_01227883.1| cytidine/deoxycytidylate deaminase [Aurantimonas manganoxydans
           SI85-9A1]
 gi|90336015|gb|EAS49763.1| cytidine/deoxycytidylate deaminase [Aurantimonas manganoxydans
           SI85-9A1]
          Length = 202

 Score =  170 bits (433), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 74/128 (57%), Positives = 96/128 (75%)

Query: 22  NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81
           NE PVGAV V  ++II+R GN  R+  D TAHAEI+AIR     L  E LP+ DLYVTLE
Sbjct: 74  NETPVGAVIVRGDEIIARGGNETRQRNDPTAHAEIVAIRAAAARLGSERLPDCDLYVTLE 133

Query: 82  PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141
           PC MCAAAIS ARIRRLYYGA++PKGGG++ G +F++  TCHH+PE+Y  I+ + S +++
Sbjct: 134 PCAMCAAAISFARIRRLYYGAADPKGGGVDAGPRFFSQPTCHHAPEVYSDIAARESAELL 193

Query: 142 QDFFKERR 149
           + FF+ RR
Sbjct: 194 RGFFQARR 201


>gi|38232870|ref|NP_938637.1| putative cytosine deaminase [Corynebacterium diphtheriae NCTC
           13129]
 gi|38199128|emb|CAE48752.1| Putative cytosine deaminase [Corynebacterium diphtheriae]
          Length = 147

 Score =  170 bits (433), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 46/144 (31%), Positives = 66/144 (45%), Gaps = 3/144 (2%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  A+  A       +IPVGA+    +  I+ R  NR     +   HAEI+AI   C   
Sbjct: 2   MREAITLAHTTPPA-DIPVGAIIYGPDGTILGRGTNRRETDHNPLGHAEIMAITQACTQR 60

Query: 67  SQ-EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
                L +  L VTLEPCTMCA A+  +RI  + +GA  PK G   +           H+
Sbjct: 61  GDGWRLTDCTLAVTLEPCTMCAGALVGSRIGHIIFGAYEPKTGACGSAFDVVRDPAVLHT 120

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
            ++  GI E    +++ +FF   R
Sbjct: 121 VQVRGGILEAECAELMTNFFGGLR 144


>gi|330805063|ref|XP_003290507.1| hypothetical protein DICPUDRAFT_81234 [Dictyostelium purpureum]
 gi|325079386|gb|EGC32989.1| hypothetical protein DICPUDRAFT_81234 [Dictyostelium purpureum]
          Length = 259

 Score =  170 bits (433), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 50/151 (33%), Positives = 75/151 (49%), Gaps = 7/151 (4%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           +    FM  A++E + A    E+PV  V V NN+II+R  N+    K+ T HAE+ A   
Sbjct: 41  QNHIKFMKEAVKEGEKALKEGEVPVACVIVHNNQIIARGSNKTNIKKNGTRHAELEAFDQ 100

Query: 62  ------GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
                         +L E DLYVT+EPC MCA A+SLA+I R+++G  N K GG  +   
Sbjct: 101 IFLNKELNERFKDTLLVECDLYVTVEPCLMCAGALSLAKINRVFFGCHNDKFGGNGSVYS 160

Query: 116 FYTLATCHHSP-EIYPGISEQRSRQIIQDFF 145
                  +  P     G+ +  +  ++Q F+
Sbjct: 161 LNLAPISNGKPYNAISGLLKDDAIHLLQLFY 191


>gi|254454396|ref|ZP_05067833.1| cytosine deaminase [Octadecabacter antarcticus 238]
 gi|198268802|gb|EDY93072.1| cytosine deaminase [Octadecabacter antarcticus 238]
          Length = 145

 Score =  170 bits (433), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 70/130 (53%), Positives = 90/130 (69%), Gaps = 1/130 (0%)

Query: 21  RNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVT 79
           R E+PVGAV +     +I+ AGNR REL D TAHAEILAIR  C  L QE L   D+YVT
Sbjct: 14  RGEVPVGAVVIGPTGLVIATAGNRTRELNDPTAHAEILAIRAACAALGQERLTGHDIYVT 73

Query: 80  LEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139
           LEPC MCAAAI+ AR+ RLYYGAS+PK GG+    + ++   CHH+PE+Y G+S + S  
Sbjct: 74  LEPCPMCAAAIANARLARLYYGASDPKSGGVAQPPRVFSHPQCHHTPEVYDGLSAETSET 133

Query: 140 IIQDFFKERR 149
           +++ FF  +R
Sbjct: 134 LLKSFFAAKR 143


>gi|260436012|ref|ZP_05789982.1| tRNA-adenosine deaminase [Synechococcus sp. WH 8109]
 gi|260413886|gb|EEX07182.1| tRNA-adenosine deaminase [Synechococcus sp. WH 8109]
          Length = 167

 Score =  170 bits (432), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 44/147 (29%), Positives = 74/147 (50%), Gaps = 3/147 (2%)

Query: 2   KKGNV--FMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILA 58
           ++     +M   L+ A+ A    E+PV AV +    + I    NR +  +D   HAE++A
Sbjct: 13  QRDEFTRWMDVLLQRAEEAGAEGEVPVAAVILDGQGRAIGHGRNRRQNDRDPLGHAELVA 72

Query: 59  IRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
           ++    +          L VTLEPC MCA A+  AR+  + + AS+PK GG+       T
Sbjct: 73  LQQAAIVQDDWRFNNCTLIVTLEPCPMCAGALVQARMGTVIFAASDPKRGGLGGSLDLST 132

Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFF 145
            A+ HH  ++  G+ E  +R+ ++ +F
Sbjct: 133 HASAHHHMKVIEGVREPEAREQLESWF 159


>gi|227502417|ref|ZP_03932466.1| nucleoside deaminase [Corynebacterium accolens ATCC 49725]
 gi|306834972|ref|ZP_07468023.1| tRNA-specific adenosine deaminase [Corynebacterium accolens ATCC
           49726]
 gi|227076786|gb|EEI14749.1| nucleoside deaminase [Corynebacterium accolens ATCC 49725]
 gi|304569138|gb|EFM44652.1| tRNA-specific adenosine deaminase [Corynebacterium accolens ATCC
           49726]
          Length = 147

 Score =  170 bits (432), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 52/144 (36%), Positives = 72/144 (50%), Gaps = 3/144 (2%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  AL  A+      ++PVGAV      + ++   NR  +L+D TAHAEI AIR   RI 
Sbjct: 1   MQRALAVARQTPA-GDVPVGAVLYDATGRELATGVNRREQLRDPTAHAEIEAIRQAVRIH 59

Query: 67  SQ-EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
                L   +L VTLEPC MCA A+  ARI  L +GA  PK G   +        T   +
Sbjct: 60  GDGWRLIGCELVVTLEPCAMCAGALQAARISSLVFGAFEPKTGACGSLVDVLRAPTAPFT 119

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
           P++  G+ E+    +++ FF   R
Sbjct: 120 PQVRGGVLEEDCVALLEKFFTTLR 143


>gi|224002957|ref|XP_002291150.1| hypothetical protein THAPSDRAFT_34714 [Thalassiosira pseudonana
           CCMP1335]
 gi|220972926|gb|EED91257.1| hypothetical protein THAPSDRAFT_34714 [Thalassiosira pseudonana
           CCMP1335]
          Length = 171

 Score =  170 bits (432), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 57/165 (34%), Positives = 82/165 (49%), Gaps = 23/165 (13%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVL-------------NN-------KIISRAGNRNREL 47
           M  AL+EAQNA  + E+P+GAV V              NN       +I+SRA N     
Sbjct: 1   MELALQEAQNAWDKGEVPIGAVIVRELLSNATAGSTVMNNLHATRSFQILSRAHNLVETN 60

Query: 48  KDVTAHAEILAIRMGCRILSQEILP-EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPK 106
            D ++HAE+LA+R G   +     P    LY TLEPC MC A+I   RI  + YGA++ +
Sbjct: 61  IDASSHAELLALRQGSTKMQNWRFPPNSTLYTTLEPCPMCLASIQAFRIDNIVYGANDNR 120

Query: 107 GGGIENGTQFYTLAT--CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            G +       ++AT   H    +  G+ ++    I+  FF+ERR
Sbjct: 121 LGAVNTHMDLMSVATHPYHEVKSVIGGVRKEECGDILVQFFRERR 165


>gi|225055376|gb|ACN80662.1| Tsr4 [Streptomyces laurentii]
          Length = 142

 Score =  170 bits (432), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 42/128 (32%), Positives = 63/128 (49%), Gaps = 1/128 (0%)

Query: 22  NEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80
            ++PVGAV +  +  +++   N      D TAHAE+LA+R       +  L    L VTL
Sbjct: 15  GDVPVGAVVLAPDGSVLATGHNEREATGDPTAHAEVLALRRAAAATGEWRLTGCTLVVTL 74

Query: 81  EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140
           EPC MCA A+  AR+ R+ +GA + K G   +          +H PE+  G+ E      
Sbjct: 75  EPCVMCAGALVQARVERVVFGAFDEKAGATGSLWDLVRDRRLNHRPEVIHGVLEAECSAQ 134

Query: 141 IQDFFKER 148
           +  FF+ R
Sbjct: 135 LTAFFRTR 142


>gi|189485590|ref|YP_001956531.1| tRNA-specific adenosine deaminase [uncultured Termite group 1
           bacterium phylotype Rs-D17]
 gi|170287549|dbj|BAG14070.1| tRNA-specific adenosine deaminase [uncultured Termite group 1
           bacterium phylotype Rs-D17]
          Length = 149

 Score =  170 bits (432), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 54/145 (37%), Positives = 77/145 (53%), Gaps = 3/145 (2%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  AL+EA  A    E+P+GAV V +NKII+R  N+   L D TAHAEI+A+R   + L 
Sbjct: 1   MFQALKEASKARESREVPIGAVIVKDNKIIARGFNKCIALSDPTAHAEIVALRKAAKKLK 60

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
              L +   Y T+EPC MCA A++ ARI+++ +GA + K    +N  +   +        
Sbjct: 61  NYRLNDCYAYATIEPCLMCAGALAKARIKKIIFGAFDKKADCYKNILKTGDIKKLSRRLV 120

Query: 128 IYP---GISEQRSRQIIQDFFKERR 149
           I              II+DFFK+ R
Sbjct: 121 IVGKKEKHLSAECANIIKDFFKKIR 145


>gi|148228295|ref|NP_001089483.1| tRNA-specific adenosine deaminase 2 [Xenopus laevis]
 gi|82225873|sp|Q4V7V8|ADAT2_XENLA RecName: Full=tRNA-specific adenosine deaminase 2; AltName:
           Full=Deaminase domain-containing protein 1; AltName:
           Full=tRNA-specific adenosine-34 deaminase subunit ADAT2
 gi|66912051|gb|AAH97698.1| MGC115242 protein [Xenopus laevis]
          Length = 175

 Score =  170 bits (431), Expect = 8e-41,   Method: Composition-based stats.
 Identities = 42/149 (28%), Positives = 73/149 (48%), Gaps = 8/149 (5%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  A + AQ+A    E+PVG + V  N+++ +  N   E K+ T HAE++AI       
Sbjct: 13  WMHKAFQMAQDALNNGEVPVGCLMVYGNQVVGKGRNEVNETKNATQHAEMVAIDQVLDWC 72

Query: 67  ------SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL- 119
                 S ++   + LYVT+EPC MCA A+ L +I  + YG  N + GG  +        
Sbjct: 73  EMNSKKSTDVFENIVLYVTVEPCIMCAGALRLLKIPLVVYGCRNERFGGCGSVLNVSGDD 132

Query: 120 -ATCHHSPEIYPGISEQRSRQIIQDFFKE 147
                   +   G   +++ ++++ F+K+
Sbjct: 133 IPDTGTKFKCIGGYQAEKAIELLKTFYKQ 161


>gi|145221806|ref|YP_001132484.1| CMP/dCMP deaminase, zinc-binding [Mycobacterium gilvum PYR-GCK]
 gi|315446457|ref|YP_004079336.1| tRNA-adenosine deaminase [Mycobacterium sp. Spyr1]
 gi|145214292|gb|ABP43696.1| tRNA-adenosine deaminase [Mycobacterium gilvum PYR-GCK]
 gi|315264760|gb|ADU01502.1| tRNA-adenosine deaminase [Mycobacterium sp. Spyr1]
          Length = 149

 Score =  170 bits (431), Expect = 8e-41,   Method: Composition-based stats.
 Identities = 51/149 (34%), Positives = 76/149 (51%), Gaps = 3/149 (2%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRM 61
                +  AL+ A+ A  R ++P+GAV        ++RA N   EL D TAHAEILA+R 
Sbjct: 2   TDEDLIRAALDAARGAGPR-DVPIGAVVFDAEGTELARAANAREELGDPTAHAEILALRA 60

Query: 62  GCRILSQ-EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              +      L    L VT+EPCTMCA A+ +AR+ R+ +GA  PK G + +        
Sbjct: 61  AALVHGDGWRLEGATLAVTVEPCTMCAGALVMARVARVVFGAWEPKTGAVGSLWDVVRDR 120

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
              H P++  G+ E      +++FF  +R
Sbjct: 121 RLTHRPQVRGGVLEAECAAPLEEFFARQR 149


>gi|317153179|ref|YP_004121227.1| CMP/dCMP deaminase zinc-binding protein [Desulfovibrio aespoeensis
           Aspo-2]
 gi|316943430|gb|ADU62481.1| CMP/dCMP deaminase zinc-binding protein [Desulfovibrio aespoeensis
           Aspo-2]
          Length = 165

 Score =  170 bits (431), Expect = 8e-41,   Method: Composition-based stats.
 Identities = 47/143 (32%), Positives = 70/143 (48%), Gaps = 1/143 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  A  +A  AA   E P+GA     +  +++ A N    L D TAHAE+L +R     L
Sbjct: 18  MDVAFAQACMAAKEGESPIGAALFAPDGALLAAARNNPVGLNDPTAHAEVLCLRQAAARL 77

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L    L VTLEPC MC  A+  AR+  +  GA +P+ G + +  Q + L   +H  
Sbjct: 78  GNYRLTGTILAVTLEPCLMCTGALIHARVAGVVMGALDPRAGAVISNLQGHALPFANHRM 137

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
               G+ E+    +++ FF E+R
Sbjct: 138 WFVQGVMEEECSTLLKRFFLEKR 160


>gi|131888897|ref|NP_001076566.1| tRNA-specific adenosine deaminase 2 [Danio rerio]
 gi|55962646|emb|CAI11650.1| novel protein [Danio rerio]
 gi|190337669|gb|AAI63783.1| Adenosine deaminase, tRNA-specific 2, TAD2 homolog (S. cerevisiae)
           [Danio rerio]
 gi|190340014|gb|AAI63804.1| Adenosine deaminase, tRNA-specific 2, TAD2 homolog (S. cerevisiae)
           [Danio rerio]
          Length = 206

 Score =  170 bits (431), Expect = 9e-41,   Method: Composition-based stats.
 Identities = 49/151 (32%), Positives = 78/151 (51%), Gaps = 8/151 (5%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM--- 61
             +M+ A + A  A    E+PVG + V NN+II +  N   E K+ T HAE++A+     
Sbjct: 22  QTWMAKAFDMAVEALENGEVPVGCLMVYNNEIIGKGRNEVNETKNATRHAEMVALDQVLD 81

Query: 62  GCR---ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
            CR      +E+  +  LYVT+EPC MCAAA+ L RI  + YG  N + GG  +     +
Sbjct: 82  WCRLREKDCKEVCEQTVLYVTVEPCIMCAAALRLLRIPFVVYGCKNERFGGCGSVLDVSS 141

Query: 119 LATCH--HSPEIYPGISEQRSRQIIQDFFKE 147
               H   S +   G   + + ++++ F+K+
Sbjct: 142 DHLPHTGTSFKCIAGYRAEEAVEMLKTFYKQ 172


>gi|312137792|ref|YP_004005128.1| cmp/dcmp deaminase [Rhodococcus equi 103S]
 gi|325676107|ref|ZP_08155789.1| cytidine and deoxycytidylate deaminase [Rhodococcus equi ATCC
           33707]
 gi|311887131|emb|CBH46440.1| CMP/dCMP deaminase [Rhodococcus equi 103S]
 gi|325553147|gb|EGD22827.1| cytidine and deoxycytidylate deaminase [Rhodococcus equi ATCC
           33707]
          Length = 152

 Score =  169 bits (430), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 49/129 (37%), Positives = 70/129 (54%), Gaps = 2/129 (1%)

Query: 23  EIPVGAVAVLNNKI-ISRAGNRNRELKDVTAHAEILAIRMGCRILSQ-EILPEVDLYVTL 80
           ++PVGAV    + + ++RA N      D TAHAEILA+R   R+      L    L VTL
Sbjct: 24  DVPVGAVVFDADGVELARAANAREATGDPTAHAEILALRAAARVHGDGWRLEGATLAVTL 83

Query: 81  EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140
           EPCTMCA A+ LAR+ R+ +GA  PK G + +           H P++  G+ E     I
Sbjct: 84  EPCTMCAGALVLARVERVVFGAWEPKTGAVGSLWDVVRDRRLTHRPQVRGGVLEGECAGI 143

Query: 141 IQDFFKERR 149
           ++ FF+ +R
Sbjct: 144 LESFFQGQR 152


>gi|26388773|dbj|BAB32363.2| unnamed protein product [Mus musculus]
          Length = 191

 Score =  169 bits (430), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 44/154 (28%), Positives = 73/154 (47%), Gaps = 8/154 (5%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           ++   +M  A   A  A    E+PVG + V NN+++ +  N   + K+ T HAE++AI  
Sbjct: 20  QETEKWMEEATRMANEALENIEVPVGCLMVYNNEVVGKGTNEVNQTKNATRHAEMVAIDQ 79

Query: 62  GCRILSQE------ILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
                 Q       +     LYVT+EPC MCAAA+ L +I  + YG  N + GG  +   
Sbjct: 80  VLDWCHQHGQSPSTVFEHTVLYVTVEPCIMCAAALRLMKIPLVVYGCQNERFGGCGSVLN 139

Query: 116 F--YTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
                L       +  PG   + + ++++ F+K+
Sbjct: 140 IASADLPNTGRPFQCIPGYRAEEAVELLKTFYKQ 173


>gi|118619510|ref|YP_907842.1| cytidine/deoxycytidylate deaminase [Mycobacterium ulcerans Agy99]
 gi|118571620|gb|ABL06371.1| cytidine/deoxycytidylate deaminase [Mycobacterium ulcerans Agy99]
          Length = 152

 Score =  169 bits (430), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 50/129 (38%), Positives = 73/129 (56%), Gaps = 2/129 (1%)

Query: 23  EIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQ-EILPEVDLYVTL 80
           ++P+GAV +  +   ++RA N   EL D TAHAEILA+R   R+L     L    L VT+
Sbjct: 22  DVPIGAVMISADGTELARAVNAREELGDPTAHAEILALRAAARVLGDGWRLEGATLAVTV 81

Query: 81  EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140
           EPCTMCA A+ LAR+ RL +GA  PK G + +          +H P++  G+  Q     
Sbjct: 82  EPCTMCAGALVLARVARLVFGAWEPKTGAVGSLWDVVRDRRLNHRPQVRGGVLAQECAAP 141

Query: 141 IQDFFKERR 149
           +++FF  +R
Sbjct: 142 LEEFFGRQR 150


>gi|268552503|ref|XP_002634234.1| Hypothetical protein CBG01804 [Caenorhabditis briggsae]
 gi|187037916|emb|CAP22833.1| hypothetical protein CBG_01804 [Caenorhabditis briggsae AF16]
          Length = 426

 Score =  169 bits (430), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 48/149 (32%), Positives = 82/149 (55%), Gaps = 4/149 (2%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           +   +F+  A   A+ A  ++E+PVG V V++ + I R  NR  E  D T HAE++A+  
Sbjct: 7   EDDRIFLEQAFTLAEEALNQDEVPVGCVFVVDGEEIGRGRNRVNETGDPTRHAEMVAVTE 66

Query: 62  GCRILSQEI---LPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
                 +E    L +  LYV+LEPC MC++A+    IR++ YGA NP+ GG+ +      
Sbjct: 67  IWSKYGEESNNLLKKSVLYVSLEPCIMCSSAMYQLGIRKMVYGAENPRFGGVRSVGSAEK 126

Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKE 147
               ++  EI  G+  +RS  +++ F+++
Sbjct: 127 YREENN-IEIVAGVWAERSVGMLKAFYEK 154


>gi|291397092|ref|XP_002714901.1| PREDICTED: deaminase domain containing 1-like [Oryctolagus
           cuniculus]
          Length = 192

 Score =  169 bits (429), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 44/154 (28%), Positives = 76/154 (49%), Gaps = 8/154 (5%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           ++   +M  A+  A+ A    E+PVG + V NN+++ +  N   + K+ T HAE++AI  
Sbjct: 21  EETEKWMEEAMRMAKEALENIEVPVGCLMVYNNEVVGKGRNEVNQTKNATRHAEMVAIDQ 80

Query: 62  GCRILSQ------EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
                 +      E+     LYVT+EPC MCAAA+ L +I  + YG  N + GG  +   
Sbjct: 81  VLDWCRRSGKSSAEVFEHTVLYVTVEPCIMCAAALRLLKIPLVVYGCQNERFGGCGSVLN 140

Query: 116 F--YTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
                L       +  PG   + + ++++ F+K+
Sbjct: 141 IASADLPNTGRPFQCLPGYRAEEAVEMLKTFYKQ 174


>gi|313157371|gb|EFR56794.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Alistipes sp. HGB5]
          Length = 149

 Score =  169 bits (429), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 50/148 (33%), Positives = 73/148 (49%), Gaps = 5/148 (3%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           K    FM  AL EA+ A    E+P+GAV V +  ++ R  N    L D TAHAE+ A+  
Sbjct: 6   KTDEKFMRLALNEARKALQLQEVPIGAVVVADGAVVGRGHNLVETLSDPTAHAEMQALTA 65

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
               L  + L    LYVT+EPC MCA A   A++ R+ +GA +PK G      + Y+   
Sbjct: 66  AASTLGGKYLQGCTLYVTVEPCIMCAGATGWAQVGRVVWGADDPKKG-----YRRYSETV 120

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            H    +  G+  +   +++  FF   R
Sbjct: 121 FHPKTTVVRGVLGEECEELMTSFFAGLR 148


>gi|269955016|ref|YP_003324805.1| CMP/dCMP deaminase zinc-binding protein [Xylanimonas
           cellulosilytica DSM 15894]
 gi|269303697|gb|ACZ29247.1| CMP/dCMP deaminase zinc-binding protein [Xylanimonas
           cellulosilytica DSM 15894]
          Length = 190

 Score =  169 bits (429), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 46/153 (30%), Positives = 69/153 (45%), Gaps = 15/153 (9%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVL--------NNKIISRAGNRNRELKDVTAHAEI 56
           +  M  AL EA +A    ++                + +++    NR  E  D TAHAE+
Sbjct: 42  DALMGMALHEATHALASGDV-------PVGAVVVGPDGRLLGTGRNRREETGDPTAHAEV 94

Query: 57  LAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116
           LA+R       +  L    L VTLEPC MCA A+  AR+ RL  GA +PK G   +    
Sbjct: 95  LALRQAALSRREWRLEGCTLVVTLEPCVMCAGALVAARVHRLVIGAWDPKAGATGSVWDL 154

Query: 117 YTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
                 +H+ E+  G+ E     +++ FF+  R
Sbjct: 155 VRDQRANHAVEVVGGVREHECGAMLRAFFESHR 187


>gi|209966841|ref|YP_002299756.1| cytidine and deoxycytidylate deaminase, putative [Rhodospirillum
           centenum SW]
 gi|209960307|gb|ACJ00944.1| cytidine and deoxycytidylate deaminase, putative [Rhodospirillum
           centenum SW]
          Length = 158

 Score =  169 bits (429), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 73/134 (54%), Positives = 93/134 (69%), Gaps = 2/134 (1%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAG--NRNRELKDVTAHAEILAIRMGCRI 65
           M  AL EA+ A  R E+PVGAV V        A   NR  EL D TAHAE+LAIR  C +
Sbjct: 15  MRQALAEAEAAGQRGEVPVGAVIVDPATGAVVAAAGNRTEELADPTAHAEVLAIRAACAV 74

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           L    LP +DLYVTLEPC MCAAAIS AR+RR+Y+GA +PKGGG+++G +F+T  TCHH+
Sbjct: 75  LGAPRLPGLDLYVTLEPCAMCAAAISFARLRRVYFGAYDPKGGGVDHGPRFFTRTTCHHA 134

Query: 126 PEIYPGISEQRSRQ 139
           P++Y GI+E+ +  
Sbjct: 135 PDVYGGIAEREAAD 148


>gi|149926554|ref|ZP_01914815.1| putative deaminase [Limnobacter sp. MED105]
 gi|149824917|gb|EDM84131.1| putative deaminase [Limnobacter sp. MED105]
          Length = 256

 Score =  169 bits (429), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 52/149 (34%), Positives = 77/149 (51%), Gaps = 2/149 (1%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
           +   +M  AL++A+ AA   E+P+GA  V++ K ++ A N    L D  AHAE+ AIR  
Sbjct: 20  QDMPWMELALQQARLAAQAGEVPIGAAVVIDGKAVADAHNAPVLLNDACAHAEVQAIRQA 79

Query: 63  CRILSQEIL-PEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPK-GGGIENGTQFYTLA 120
           C+ +    L  +  LYVTL+PC MC  AI  ARI R+  G +  +  G ++     +  A
Sbjct: 80  CQAIGNYRLGAQATLYVTLQPCLMCIGAILHARIGRVVVGCAQSRYNGDLKQSLSVFEQA 139

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
              H      G   Q S +++  FFK RR
Sbjct: 140 QAWHPCAFETGCMAQESEELLGSFFKARR 168


>gi|50742655|ref|XP_419709.1| PREDICTED: similar to DEADC1 protein [Gallus gallus]
          Length = 172

 Score =  169 bits (429), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 46/155 (29%), Positives = 72/155 (46%), Gaps = 8/155 (5%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M+    +M  A   AQ A    E+PVG + V +   I +  N   E K+ T HAE++AI 
Sbjct: 1   MEDEAAWMERAFSMAQEALEAGEVPVGCLLVYDGAAIGKGRNEVNETKNATRHAEMVAID 60

Query: 61  MGCRILSQ------EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGT 114
                  Q      E+     LYVT+EPC MCAAA+ L +I R+ YG  N + GG  +  
Sbjct: 61  QVLEWCQQHKKDHEEVFSHSVLYVTVEPCIMCAAALRLMKIPRVVYGCRNERFGGCGSVL 120

Query: 115 QFYTLATCH--HSPEIYPGISEQRSRQIIQDFFKE 147
              +          E   G   + + ++++ F+++
Sbjct: 121 SISSDDIVDTGEPFECIAGYRAKDAVEMLKAFYRQ 155


>gi|71003327|ref|XP_756344.1| hypothetical protein UM00197.1 [Ustilago maydis 521]
 gi|46096349|gb|EAK81582.1| hypothetical protein UM00197.1 [Ustilago maydis 521]
          Length = 1260

 Score =  169 bits (429), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 48/162 (29%), Positives = 72/162 (44%), Gaps = 18/162 (11%)

Query: 2    KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
            ++   +M  AL  AQ A   NE+PVG V V   ++I+R  NR  EL + T HAE+ AI  
Sbjct: 932  EEDIKWMREALVMAQEALDANEVPVGGVFVRKGEVIARGRNRTNELMNATRHAELEAIDH 991

Query: 62   GCRIL----------------SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNP 105
               ++                      +  LYVT+EPC MC AA+    I R+ +GA N 
Sbjct: 992  ILSVMPPSAPDFAVAPHSGPEGDNPFKDTTLYVTIEPCIMCGAALRQIGIGRVVFGAGNE 1051

Query: 106  KGGGIENGTQFYTLATCHHSP--EIYPGISEQRSRQIIQDFF 145
            + GG  +    +       SP  E   G     +  +++ F+
Sbjct: 1052 RFGGNGSVLGLHDDDAIVSSPGYESVGGYLRDEAIMMLRRFY 1093


>gi|226355797|ref|YP_002785537.1| tRNA(Ile)-lysidine synthetase [Deinococcus deserti VCD115]
 gi|259533711|sp|C1D1Q9|TILS_DEIDV RecName: Full=tRNA(Ile)-lysidine synthase; AltName:
           Full=tRNA(Ile)-2-lysyl-cytidine synthase; AltName:
           Full=tRNA(Ile)-lysidine synthetase
 gi|226317787|gb|ACO45783.1| putative tRNA(Ile)-lysidine synthetase [Deinococcus deserti VCD115]
          Length = 533

 Score =  168 bits (428), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 55/143 (38%), Positives = 77/143 (53%), Gaps = 2/143 (1%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  AL  A+ AAL  E+PVGAV +    +II    N +R   D+T HAE+ A+R     L
Sbjct: 383 MGEALGLAREAALAQEVPVGAVVLGPGGRIIGSGRNTSRADSDMTRHAELAALRAATAEL 442

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L    L VTLEPC MC  A   AR+ R+ YGASNPK G +   +   + +   H P
Sbjct: 443 GTAYLTGCTLVVTLEPCPMCLGAALEARVERIVYGASNPKAGALGGVSDLLS-SHWGHVP 501

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
            +  G+  Q + ++++D F+E R
Sbjct: 502 AVTGGVRAQDAARVLRDSFQELR 524


>gi|87124293|ref|ZP_01080142.1| putative cytidine/deoxycytidylate deaminase [Synechococcus sp.
           RS9917]
 gi|86167865|gb|EAQ69123.1| putative cytidine/deoxycytidylate deaminase [Synechococcus sp.
           RS9917]
          Length = 147

 Score =  168 bits (428), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 41/143 (28%), Positives = 68/143 (47%), Gaps = 1/143 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M   L  A       E+PV AV +    + I   GNR    +D   HAE++A+    ++ 
Sbjct: 1   MGRLLRRADQLGREGEVPVCAVILDGLGRCIGYGGNRRERQRDPLGHAELVALGQASQLR 60

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
                 +  L VTLEPC MCA A+  AR+ ++ + A + K G + +        + HH  
Sbjct: 61  QDWRFNDCTLLVTLEPCPMCAGALVQARMGQVIFAAWDSKRGALGSTIDLSQHRSAHHHM 120

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
            +  G+ E  +R  ++ +F++RR
Sbjct: 121 RVVGGVMEPEARTRLEAWFRQRR 143


>gi|305680082|ref|ZP_07402892.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Corynebacterium matruchotii ATCC 14266]
 gi|305660702|gb|EFM50199.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Corynebacterium matruchotii ATCC 14266]
          Length = 147

 Score =  168 bits (428), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 48/144 (33%), Positives = 65/144 (45%), Gaps = 5/144 (3%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  AL          ++PVGAV    +  +I R  NR     D TAHAEI+AIR   R  
Sbjct: 7   MRHALAV---PTPLGDVPVGAVIFDPDGNVIGRGSNRREADGDPTAHAEIIAIREAVRNF 63

Query: 67  SQ-EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
                L +  + VTLEPC MCA A+  ARI  + +GA  PK G   +           + 
Sbjct: 64  HDGWRLTDCTIAVTLEPCCMCAGALVAARIGTIIFGAYEPKMGACGSVFDVVRDPQVLYQ 123

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
           P++  G+        +  FF+E R
Sbjct: 124 PQVIGGVLADECAAQLGVFFQECR 147


>gi|148546319|ref|YP_001266421.1| CMP/dCMP deaminase, zinc-binding [Pseudomonas putida F1]
 gi|148510377|gb|ABQ77237.1| tRNA-adenosine deaminase [Pseudomonas putida F1]
 gi|313497401|gb|ADR58767.1| CMP/dCMP deaminase zinc-binding protein [Pseudomonas putida BIRD-1]
          Length = 159

 Score =  168 bits (427), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 60/148 (40%), Positives = 82/148 (55%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
            +   FM  AL  A   A   E+PVGAV V + ++I +  NR     D +AHAE++AIR 
Sbjct: 9   SRDQEFMRLALALAAEGAALGEVPVGAVLVQHGQVIGQGFNRPIIDSDPSAHAEMVAIRA 68

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
             R  S   LP   LYVTLEPC+MCA  I  +R+ R+ +GA  PK G +++  QF+    
Sbjct: 69  AARSASNYRLPGSTLYVTLEPCSMCAGLIVHSRVMRVVFGALEPKAGIVQSQGQFFGQGF 128

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H   +  G+  Q   QI+ DFFK RR
Sbjct: 129 LNHRVMVEGGVLAQECGQILSDFFKARR 156


>gi|289643685|ref|ZP_06475797.1| CMP/dCMP deaminase zinc-binding [Frankia symbiont of Datisca
           glomerata]
 gi|289506518|gb|EFD27505.1| CMP/dCMP deaminase zinc-binding [Frankia symbiont of Datisca
           glomerata]
          Length = 163

 Score =  168 bits (427), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 48/129 (37%), Positives = 67/129 (51%), Gaps = 1/129 (0%)

Query: 22  NEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80
            ++PVGAV V  +  II R  N     +D TAHAE++A+R          L    L VTL
Sbjct: 30  GDVPVGAVVVDADGTIIGRGRNAREAERDPTAHAEVVALRAAAARAGTWRLSGTTLVVTL 89

Query: 81  EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140
           EPC MCA A+ +AR+ RL YGA +P+ G   +           H  E+  G+ E+   ++
Sbjct: 90  EPCAMCAGALIMARVDRLVYGAYDPRAGAAGSLWDTVRDPRLDHHTEVITGVREEECARL 149

Query: 141 IQDFFKERR 149
           + DFF  RR
Sbjct: 150 LTDFFVARR 158


>gi|157413307|ref|YP_001484173.1| putative cytidine/deoxycytidylate deaminase [Prochlorococcus
           marinus str. MIT 9215]
 gi|157387882|gb|ABV50587.1| putative cytidine/deoxycytidylate deaminase [Prochlorococcus
           marinus str. MIT 9215]
          Length = 171

 Score =  168 bits (427), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 45/151 (29%), Positives = 75/151 (49%), Gaps = 6/151 (3%)

Query: 2   KKGNVFMSCALEEAQNAALRN--EIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILA 58
            K  ++M+  L   + +      E+P+ ++ +    + I R  NR    KD   HAEI+A
Sbjct: 21  SKYTLWMNSLL---RRSIEIGKVELPICSIILDERGRCIGRGVNRRNINKDPLGHAEIMA 77

Query: 59  IRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
           +R    I +     E  +   LEPCTMC++A+  AR+ ++ +GA + K GG+        
Sbjct: 78  LRQASLIKNDWRFNECTIITNLEPCTMCSSALIQARMGKVIFGAYDKKRGGLGGSIDLSK 137

Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             + HH  EI  G+ E    +I+Q +FK+ R
Sbjct: 138 HESAHHKMEIIGGLLEDECSKILQIWFKKLR 168


>gi|225020161|ref|ZP_03709353.1| hypothetical protein CORMATOL_00161 [Corynebacterium matruchotii
           ATCC 33806]
 gi|224947126|gb|EEG28335.1| hypothetical protein CORMATOL_00161 [Corynebacterium matruchotii
           ATCC 33806]
          Length = 158

 Score =  168 bits (427), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 48/144 (33%), Positives = 65/144 (45%), Gaps = 5/144 (3%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  AL          ++PVGAV    +  +I R  NR     D TAHAEI+AIR   R  
Sbjct: 18  MRHALAV---PTPLGDVPVGAVIFDPDGNVIGRGSNRREADGDPTAHAEIIAIREAVRNF 74

Query: 67  SQ-EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
                L +  + VTLEPC MCA A+  ARI  + +GA  PK G   +           + 
Sbjct: 75  HDGWRLTDCTIAVTLEPCCMCAGALVAARIGTIIFGAYEPKMGACGSVFDVVRDPQVLYQ 134

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
           P++  G+        +  FF+E R
Sbjct: 135 PQVIGGVLADECAAQLGVFFQECR 158


>gi|296282925|ref|ZP_06860923.1| tRNA-adenosine deaminase [Citromicrobium bathyomarinum JL354]
          Length = 152

 Score =  168 bits (426), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 64/128 (50%), Positives = 90/128 (70%)

Query: 22  NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81
            E+PVGAV + + ++I++A N  R L D TAHAE+LA+R   + L QE L   DL+VTLE
Sbjct: 24  GEVPVGAVVMRHGEVIAQAHNAPRTLADPTAHAEVLALRAAAKALGQERLEGCDLWVTLE 83

Query: 82  PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141
           PC MCA AI+ ARI RLYYGA++PKGG + +G + +    CHH PE+Y G+ E+ + +++
Sbjct: 84  PCAMCAGAIAHARIGRLYYGAADPKGGAVAHGARVFDHPQCHHRPEVYSGMGEEEAAKML 143

Query: 142 QDFFKERR 149
           + FF ERR
Sbjct: 144 RGFFNERR 151


>gi|120406536|ref|YP_956365.1| CMP/dCMP deaminase [Mycobacterium vanbaalenii PYR-1]
 gi|119959354|gb|ABM16359.1| tRNA-adenosine deaminase [Mycobacterium vanbaalenii PYR-1]
          Length = 166

 Score =  168 bits (426), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 47/129 (36%), Positives = 70/129 (54%), Gaps = 2/129 (1%)

Query: 23  EIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQ-EILPEVDLYVTL 80
           ++P+GAV    + + ++RA N   E  D TAHAEILA+R   R L     L    L VT+
Sbjct: 38  DVPIGAVVFAPDGRELARAANAREEFGDPTAHAEILALRAAARELGDGWRLEGATLAVTV 97

Query: 81  EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140
           EPCTMCA A+ +AR+ R+ +GA  PK G + +           H P++  G+ E      
Sbjct: 98  EPCTMCAGALVMARVARVVFGAWEPKTGAVGSLWDVVRDRRLTHRPQVRGGVLEAECAAP 157

Query: 141 IQDFFKERR 149
           +++FF  +R
Sbjct: 158 LEEFFAGQR 166


>gi|242041093|ref|XP_002467941.1| hypothetical protein SORBIDRAFT_01g036850 [Sorghum bicolor]
 gi|241921795|gb|EER94939.1| hypothetical protein SORBIDRAFT_01g036850 [Sorghum bicolor]
          Length = 183

 Score =  168 bits (426), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 50/163 (30%), Positives = 77/163 (47%), Gaps = 21/163 (12%)

Query: 6   VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
            FM  ALE+A+ A    E+PVG V V + K+IS   N+    ++ T HAE+ AI +  R 
Sbjct: 4   AFMEQALEQAKFALDNLEVPVGCVIVEDGKVISSGSNKTNATRNATRHAEMEAIDVLLRE 63

Query: 66  LSQ---------EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116
                       E     DLYVT EPC MCA A+S+  IR +Y+G +N K GG  +    
Sbjct: 64  WQSMGLDQTQVAEKFAGCDLYVTCEPCIMCATALSIIGIREVYFGCANDKFGGCGSIMSL 123

Query: 117 Y------------TLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
           +            + A+     +   GI  + +  + + F+++
Sbjct: 124 HKGDTSSSDDLSGSQASKPKGFKCTGGIMAEEAVALFRCFYEQ 166


>gi|254466312|ref|ZP_05079723.1| cytosine deaminase [Rhodobacterales bacterium Y4I]
 gi|206687220|gb|EDZ47702.1| cytosine deaminase [Rhodobacterales bacterium Y4I]
          Length = 156

 Score =  168 bits (426), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 74/143 (51%), Positives = 98/143 (68%), Gaps = 1/143 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGA-VAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  ALE+A+ AA R E+PVGA +   + ++ + AGNR REL D TAHAEIL IR  C  L
Sbjct: 7   MDKALEQARAAAARGEVPVGAALIAPDGQVAALAGNRTRELNDPTAHAEILTIREACARL 66

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
             E L   DLYVTLEPC MCAAAI+ ARIRR+YYGA++PK GG+ +G   ++    HH P
Sbjct: 67  GSERLTGYDLYVTLEPCAMCAAAIAAARIRRVYYGAADPKSGGVAHGACVFSHPQAHHVP 126

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+Y GI+E  +  ++++FF  +R
Sbjct: 127 EVYDGIAEGEASALLKEFFAGKR 149


>gi|114778043|ref|ZP_01452943.1| cytidine/deoxycytidylate deaminase family protein [Mariprofundus
           ferrooxydans PV-1]
 gi|114551649|gb|EAU54202.1| cytidine/deoxycytidylate deaminase family protein [Mariprofundus
           ferrooxydans PV-1]
          Length = 157

 Score =  168 bits (426), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 53/142 (37%), Positives = 73/142 (51%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M     +M  AL  A+ AA   E+PVGA+ VL +       N    L D +AHAE+ A+R
Sbjct: 1   MMDDRHYMQKALLLAETAAANGEVPVGALVVLPDGREFAGHNAPITLHDPSAHAEMRAMR 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
             C  +    L +  LYVTLEPCTMCA AI  ARI R+ YGA +PK G + +  Q     
Sbjct: 61  AACAAVGNYRLNDATLYVTLEPCTMCAGAIVHARIGRVVYGADDPKTGAVTSLYQILADH 120

Query: 121 TCHHSPEIYPGISEQRSRQIIQ 142
             +H P +  G+       +++
Sbjct: 121 RLNHQPTVTSGVMADECSALLK 142


>gi|242219384|ref|XP_002475472.1| predicted protein [Postia placenta Mad-698-R]
 gi|220725331|gb|EED79323.1| predicted protein [Postia placenta Mad-698-R]
          Length = 175

 Score =  167 bits (425), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 44/151 (29%), Positives = 76/151 (50%), Gaps = 8/151 (5%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR-- 60
           +   +M  A++ A+ A    E+PVG + V + ++I++A NR  +L++ T HAE+ AI   
Sbjct: 6   EHVQWMRQAMQMAEIALAHGEVPVGCIFVRDGRVIAQARNRTNKLRNATRHAELEAIDEI 65

Query: 61  ----MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116
                    L+   L E  LYVT+EPC MCA+A+    I+ ++YG  N + GG  +    
Sbjct: 66  LADKQWTPALTPYPLSETTLYVTVEPCIMCASALRQLGIKEVFYGCENDRFGGCGSVLGV 125

Query: 117 YTL--ATCHHSPEIYPGISEQRSRQIIQDFF 145
                   H + E   G   + +  +++ F+
Sbjct: 126 NAEVPHPAHPAYEAKGGYLREEAIMVLRRFY 156


>gi|239907227|ref|YP_002953968.1| putative deaminase [Desulfovibrio magneticus RS-1]
 gi|239797093|dbj|BAH76082.1| putative deaminase [Desulfovibrio magneticus RS-1]
          Length = 162

 Score =  167 bits (425), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 46/129 (35%), Positives = 70/129 (54%), Gaps = 1/129 (0%)

Query: 22  NEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80
            E PVGAV +    ++++RAGN      D TAHAE+  +R     +    LP   L VTL
Sbjct: 29  GETPVGAVLLSAAGELLARAGNAPITTNDPTAHAEMRVLRQAAAKVGNYRLPGTILAVTL 88

Query: 81  EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140
           EPC MC  A+  AR+  L YGA++P+ G +++      L   +H   +  GI  +    I
Sbjct: 89  EPCLMCLGAMIHARVGLLVYGATDPRCGVVDSRLPGPDLPFFNHRFNVVSGIRAEECGGI 148

Query: 141 IQDFFKERR 149
           +++FF+E+R
Sbjct: 149 LRNFFREKR 157


>gi|118404850|ref|NP_001072562.1| tRNA-specific adenosine deaminase 2 [Xenopus (Silurana) tropicalis]
 gi|123905851|sp|Q0P4H0|ADAT2_XENTR RecName: Full=tRNA-specific adenosine deaminase 2; AltName:
           Full=Deaminase domain-containing protein 1; AltName:
           Full=tRNA-specific adenosine-34 deaminase subunit ADAT2
 gi|112419108|gb|AAI22085.1| deaminase domain containing 1 [Xenopus (Silurana) tropicalis]
          Length = 170

 Score =  167 bits (425), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 43/149 (28%), Positives = 75/149 (50%), Gaps = 8/149 (5%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  A + AQ+A    E+PVG + V +N+++ +  N   E K+ T HAE++AI       
Sbjct: 8   WMHKAFQMAQDALNNGEVPVGCLMVYDNQVVGKGRNEVNETKNATRHAEMVAIDQVLDWC 67

Query: 67  ------SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
                 S+++   + LYVT+EPC MCA A+ L +I  + YG  N + GG  +        
Sbjct: 68  EKNSKKSRDVFENIVLYVTVEPCIMCAGALRLLKIPLVVYGCRNERFGGCGSVLNVAGDN 127

Query: 121 TCHHSPEI--YPGISEQRSRQIIQDFFKE 147
                 E     G   +++ ++++ F+K+
Sbjct: 128 IPDTGTEFKYIGGYQAEKAVELLKTFYKQ 156


>gi|50954049|ref|YP_061337.1| cytosine/adenosine deaminase [Leifsonia xyli subsp. xyli str.
           CTCB07]
 gi|50950531|gb|AAT88232.1| cytosine/adenosine deaminase [Leifsonia xyli subsp. xyli str.
           CTCB07]
          Length = 143

 Score =  167 bits (425), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 42/129 (32%), Positives = 63/129 (48%), Gaps = 1/129 (0%)

Query: 22  NEIPVGAVAVLNNK-IISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80
            ++PV A+ V   + +I    N    L+D TAHAE+LA+R      +   L    L VTL
Sbjct: 15  GDVPVAALVVDAGERVIGTGRNERELLRDPTAHAEVLALREAASSRADWNLEGCTLVVTL 74

Query: 81  EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140
           EPC MCA AI  AR+  + +GA + K G   +              E+Y G+  +  R +
Sbjct: 75  EPCAMCAGAILGARVTTVVFGAWDEKAGAAGSLYDILRDRRLPARSEVYAGVLAEECRAL 134

Query: 141 IQDFFKERR 149
           +  FF+ +R
Sbjct: 135 LLAFFEAKR 143


>gi|219127140|ref|XP_002183799.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217404522|gb|EEC44468.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 160

 Score =  167 bits (425), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 47/150 (31%), Positives = 79/150 (52%), Gaps = 4/150 (2%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVA--VLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
              FM+ ALE++  A    E+P+GA+   V   +I+  + N+  +  D +AHAE+LA+R 
Sbjct: 9   HEHFMTMALEQSIVAGKCGEVPIGALVPSVHRLQILGSSHNQVEQKYDASAHAELLAMRQ 68

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
             R +    L    LY TLEPC +C A+    R+ R+ YGAS+ + G + +      +A 
Sbjct: 69  AARRIRNWRLQSCTLYSTLEPCVVCLASCQAFRVSRVVYGASDFRLGAVHSHIALLDMAQ 128

Query: 122 --CHHSPEIYPGISEQRSRQIIQDFFKERR 149
              H+   +  G+    S ++++ FF+ RR
Sbjct: 129 HPFHNVTSVIGGVHNTTSAELLRSFFRSRR 158


>gi|115452727|ref|NP_001049964.1| Os03g0321900 [Oryza sativa Japonica Group]
 gi|108707878|gb|ABF95673.1| Cytidine and deoxycytidylate deaminase zinc-binding region family
           protein, expressed [Oryza sativa Japonica Group]
 gi|113548435|dbj|BAF11878.1| Os03g0321900 [Oryza sativa Japonica Group]
 gi|218192723|gb|EEC75150.1| hypothetical protein OsI_11352 [Oryza sativa Indica Group]
          Length = 183

 Score =  167 bits (425), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 49/159 (30%), Positives = 77/159 (48%), Gaps = 18/159 (11%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  ALE+A+ A    E+PVG V V + K+IS   N+    ++ T HAE+ AI +  R  
Sbjct: 8   FMELALEQAKFALDNLEVPVGCVIVEDGKVISSGSNKTNATRNATRHAEMEAIDILLREW 67

Query: 67  SQ---------EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFY 117
                      E     DLYVT EPC MCA A+S+  IR +Y+G +N K GG  +    +
Sbjct: 68  QGMGLDQPQVAEKFARCDLYVTCEPCIMCAMALSILGIREVYFGCANDKFGGCGSIMSLH 127

Query: 118 TLATC---------HHSPEIYPGISEQRSRQIIQDFFKE 147
             ++              +   GI  + +  + ++F+++
Sbjct: 128 QSSSAELSGEEIPGPKGYKCTGGIMAEEAVALFRNFYEQ 166


>gi|288919170|ref|ZP_06413508.1| CMP/dCMP deaminase zinc-binding [Frankia sp. EUN1f]
 gi|288349417|gb|EFC83656.1| CMP/dCMP deaminase zinc-binding [Frankia sp. EUN1f]
          Length = 156

 Score =  167 bits (425), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 44/115 (38%), Positives = 60/115 (52%)

Query: 35  KIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLAR 94
           +++ R  N      D TAHAE++A+R     L    L    L VTLEPCTMCA A+ LAR
Sbjct: 29  QVLGRGHNAREATGDPTAHAEVIALRHAAAELGAWRLGGTTLVVTLEPCTMCAGALVLAR 88

Query: 95  IRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
           + R+ YGA +PK G + +          +H PE+  G+ EQ     +  FF  RR
Sbjct: 89  VDRVVYGAVDPKAGAVGSLWDVVRDRRLNHRPEVISGVREQECSDQLAAFFDGRR 143


>gi|118464690|ref|YP_879612.1| cytidine and deoxycytidylate deaminase family protein
           [Mycobacterium avium 104]
 gi|254773334|ref|ZP_05214850.1| cytidine and deoxycytidylate deaminase family protein
           [Mycobacterium avium subsp. avium ATCC 25291]
 gi|118165977|gb|ABK66874.1| cytidine and deoxycytidylate deaminase family protein
           [Mycobacterium avium 104]
          Length = 152

 Score =  167 bits (425), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 57/151 (37%), Positives = 78/151 (51%), Gaps = 3/151 (1%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAI 59
           M      +  AL  A  A  R ++P+GAV V  +   ++RA N    L D TAHAEILA+
Sbjct: 1   MISDEDLIRSALAVAATAGPR-DVPIGAVVVGADGTELARAVNAREALGDPTAHAEILAL 59

Query: 60  RMGCRILSQ-EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
           R     L     L    L VT+EPCTMCA A+ LARI RL +GA  PK G + +      
Sbjct: 60  RAAAAALGDGWRLEGATLAVTVEPCTMCAGALVLARIARLVFGAWEPKTGAVGSLWDVVR 119

Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
               +H PE+  G+ E+    +++ FF  +R
Sbjct: 120 DRRLNHRPEVRGGVLERECAALLEGFFARQR 150


>gi|317969787|ref|ZP_07971177.1| tRNA-specific adenosine deaminase [Synechococcus sp. CB0205]
          Length = 182

 Score =  167 bits (425), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 41/146 (28%), Positives = 71/146 (48%), Gaps = 1/146 (0%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIR 60
           ++  ++M   L  A+    + EIPV AV +    + +    NR +  +    HAE++A+ 
Sbjct: 16  QRHELWMRRLLRRAEAVGEKGEIPVAAVLLDGHGRALGWGVNRRQREQRPLGHAELMALE 75

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              R+       +  L VTLEPC MCA A+  AR+ ++ +GA +PK G +       T  
Sbjct: 76  QAARLRGDWRFNDCSLIVTLEPCPMCAGALVQARMGQVIFGAHDPKRGALGGCLNLATDP 135

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFK 146
           + HH   +  G+ E   +  ++ +FK
Sbjct: 136 SAHHHMTVMGGVLELECKSRLEAWFK 161


>gi|87302789|ref|ZP_01085600.1| cytidine/deoxycytidylate deaminase family protein [Synechococcus
           sp. WH 5701]
 gi|87282672|gb|EAQ74630.1| cytidine/deoxycytidylate deaminase family protein [Synechococcus
           sp. WH 5701]
          Length = 169

 Score =  167 bits (425), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 42/142 (29%), Positives = 69/142 (48%), Gaps = 1/142 (0%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGC 63
             +M   L  AQ A    EIPV A+ +    + +    NR +  +D   HAE++A+    
Sbjct: 13  QFWMERLLRMAQRAGEAGEIPVAAIVLDGAGRALGWGTNRRQTHQDPLGHAELVALSQAA 72

Query: 64  RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123
           R++         L VTLEPC MCA A+  AR+ R+ + A + K G +          + H
Sbjct: 73  RLIHDWRFNACSLLVTLEPCPMCAGALIQARMGRVVFAAGDAKRGALGGCLNLAADPSSH 132

Query: 124 HSPEIYPGISEQRSRQIIQDFF 145
           H  E+  G+ E  +R++++ +F
Sbjct: 133 HHMEVMGGVRELEARELLESWF 154


>gi|224047988|ref|XP_002195924.1| PREDICTED: adenosine deaminase, tRNA-specific 2, TAD2 homolog (S.
           cerevisiae) [Taeniopygia guttata]
          Length = 172

 Score =  167 bits (424), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 45/142 (31%), Positives = 74/142 (52%), Gaps = 8/142 (5%)

Query: 14  EAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL------S 67
           EA+ A  + E+PVG + V N ++I R  N   E K+ T HAE++AI              
Sbjct: 14  EAKEALEKGEVPVGCLLVYNGEVIGRGRNEVNETKNATGHAEMVAIDQVLDWCKQHKRDY 73

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS-- 125
           +E+ P++ LYVT+EPC MCAAA+ L +I R+ YG  N + GG  +     +         
Sbjct: 74  REVFPQLVLYVTVEPCIMCAAAVRLMKIPRVVYGCRNERFGGCGSVLSISSDDMVDSGDP 133

Query: 126 PEIYPGISEQRSRQIIQDFFKE 147
            E   G   + + ++++ F+++
Sbjct: 134 FECSSGYRAEEAVELLKAFYRQ 155


>gi|152964439|ref|YP_001360223.1| CMP/dCMP deaminase zinc-binding [Kineococcus radiotolerans
           SRS30216]
 gi|151358956|gb|ABS01959.1| CMP/dCMP deaminase zinc-binding [Kineococcus radiotolerans
           SRS30216]
          Length = 144

 Score =  167 bits (424), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 51/143 (35%), Positives = 69/143 (48%), Gaps = 1/143 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  AL+EA+      ++PVGAV V     ++    N      D TAHAE+LA+R   R  
Sbjct: 1   MGLALDEARACLATGDVPVGAVVVDAAGTVLGAGRNEREAAGDPTAHAEVLALRAAARAR 60

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
            +  L    L VTLEPC MCA A  LAR+ RL  GA +P+ G   +       A  +H  
Sbjct: 61  GEWRLTGCTLVVTLEPCVMCAGATVLARVDRLVLGAWDPRFGAAGSLRDVVRDARLNHVV 120

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+   +     R ++  FF  RR
Sbjct: 121 EVAGDVRGAECRALLDGFFAARR 143


>gi|188994253|ref|YP_001928505.1| putative cytidine/deoxycytidylate deaminase [Porphyromonas
           gingivalis ATCC 33277]
 gi|188593933|dbj|BAG32908.1| putative cytidine/deoxycytidylate deaminase [Porphyromonas
           gingivalis ATCC 33277]
          Length = 159

 Score =  167 bits (424), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 44/140 (31%), Positives = 61/140 (43%), Gaps = 5/140 (3%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           ++    M  A+  A  +      P GAV V + +II+   NR     D TAHAE+  IRM
Sbjct: 5   EQDKEMMREAIRLADESVANGGGPFGAVIVKDGEIIAATSNRVTLDNDPTAHAEVNCIRM 64

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF----Y 117
            C+ L    L    +Y + EPC MC  AI  ARI R++YG +      I     F     
Sbjct: 65  ACKRLGTFDLSGCTIYTSCEPCPMCLGAIYWARIDRIFYGNNRQDAADIGFDDDFIYQEL 124

Query: 118 TLATCHHSPEIYPGISEQRS 137
                + S  I P I +  +
Sbjct: 125 ARPMDNRSTPIIP-ILQDEA 143


>gi|254525362|ref|ZP_05137414.1| cytosine/adenosine deaminase [Prochlorococcus marinus str. MIT
           9202]
 gi|221536786|gb|EEE39239.1| cytosine/adenosine deaminase [Prochlorococcus marinus str. MIT
           9202]
          Length = 171

 Score =  167 bits (424), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 45/151 (29%), Positives = 75/151 (49%), Gaps = 6/151 (3%)

Query: 2   KKGNVFMSCALEEAQNAALRN--EIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILA 58
            K  ++M+  L   + +      E+P+ ++ +    + I R  NR    KD   HAEI+A
Sbjct: 21  SKYTLWMNSIL---RRSKEIGKVELPICSIILDERGRCIGRGVNRRNINKDPLGHAEIMA 77

Query: 59  IRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
           +R    I +     E  +   LEPCTMC++A+  AR+ ++ +GA + K GG+        
Sbjct: 78  LRQASLIKNDWRFNECTIITNLEPCTMCSSALIQARMGKVIFGAYDKKRGGLGGSIDLSK 137

Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             + HH  EI  G+ E    +I+Q +FK+ R
Sbjct: 138 HESAHHKMEIIGGLLEDECSKILQIWFKKLR 168


>gi|325191112|emb|CCA25598.1| SUMO ligase putative [Albugo laibachii Nc14]
          Length = 196

 Score =  167 bits (424), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 55/149 (36%), Positives = 80/149 (53%), Gaps = 3/149 (2%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
            K   FM  ALEEA+ A +R E+PVG VAV  N+IIS A NR  EL + T HAE++AI  
Sbjct: 9   DKDVGFMREALEEAERALVRGEVPVGCVAVYQNQIISFASNRTNELCNATKHAELVAIDY 68

Query: 62  GCRILSQEI--LPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
                +       E   YVT EPC MCAAA+   ++ R+ +G  N + GG  +    +  
Sbjct: 69  IVSNYNNTRAIFQETTFYVTCEPCIMCAAALLQCKVVRVVFGCQNFRFGGCGSVLSLHEP 128

Query: 120 -ATCHHSPEIYPGISEQRSRQIIQDFFKE 147
            A    +   +PGI    + +++Q F+++
Sbjct: 129 TANIPRTFSCHPGILRIEAIELLQRFYEQ 157


>gi|26987771|ref|NP_743196.1| cumB protein [Pseudomonas putida KT2440]
 gi|24982465|gb|AAN66660.1|AE016294_2 cumB protein [Pseudomonas putida KT2440]
          Length = 145

 Score =  167 bits (424), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 53/126 (42%), Positives = 74/126 (58%)

Query: 24  IPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83
           +PVGAV V + ++I +  NR     D +AHAE++AIR   R  S   LP   LYVTLEPC
Sbjct: 17  VPVGAVLVQHGQVIGQGFNRPIIDSDPSAHAEMVAIRAAARSASNYRLPGSTLYVTLEPC 76

Query: 84  TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQD 143
           +MCA  I  +R+ R+ +GA  PK G +++  QF+     +H   +  G+  Q   QI+ D
Sbjct: 77  SMCAGLIVHSRVMRVVFGALEPKAGIVQSQGQFFGQGFLNHRVMVEGGVLAQECGQILSD 136

Query: 144 FFKERR 149
           FFK RR
Sbjct: 137 FFKARR 142


>gi|17541138|ref|NP_502546.1| hypothetical protein JC8.4 [Caenorhabditis elegans]
 gi|6425182|emb|CAB05231.1| C. elegans protein JC8.4, partially confirmed by transcript
           evidence [Caenorhabditis elegans]
          Length = 176

 Score =  167 bits (424), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 50/149 (33%), Positives = 80/149 (53%), Gaps = 4/149 (2%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
           +   F+  A E AQ A   +E+PVG V V+N   I R  NR  E  D T HAE++A+   
Sbjct: 9   EDTAFLEKAFELAQEALDEDEVPVGCVFVVNGTEIGRGRNRVNETGDPTRHAEMVAVTEM 68

Query: 63  CRILSQ---EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
            +       ++L +  LYV+LEPC MC++A+    IR++ YGA NP+ GG+ +       
Sbjct: 69  WKEHGTGCEDLLKKSTLYVSLEPCIMCSSAMYQLGIRKMVYGAENPRFGGVRSVGS-AEK 127

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKER 148
                + +I  GI  +RS  +++ F+++ 
Sbjct: 128 YRMEDNVQIVAGIWSERSVAMLKTFYEKL 156


>gi|297563744|ref|YP_003682718.1| CMP/dCMP deaminase zinc-binding protein [Nocardiopsis dassonvillei
           subsp. dassonvillei DSM 43111]
 gi|296848192|gb|ADH70212.1| CMP/dCMP deaminase zinc-binding protein [Nocardiopsis dassonvillei
           subsp. dassonvillei DSM 43111]
          Length = 160

 Score =  167 bits (424), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 50/148 (33%), Positives = 70/148 (47%), Gaps = 6/148 (4%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +  A+ E + A    ++PVGAV +  +  ++    N      D TAHAE+LA+R   R  
Sbjct: 11  LRAAIAEGEAALETGDVPVGAVVLDADGAVLGTGRNEREATGDPTAHAEVLALRAAARAR 70

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
            +  L    L VTLEPCTMCA A  L+R+ RL YGA + K G   +          +H P
Sbjct: 71  GEWRLGGCTLVVTLEPCTMCAGATVLSRVDRLVYGARDAKAGAAGSVWDAVRDPRLNHRP 130

Query: 127 EIYPG-----ISEQRSRQIIQDFFKERR 149
           E+ P          R   ++  FF  RR
Sbjct: 131 EVVPPDLVPRELSDRCSDLLSRFFARRR 158


>gi|226528904|ref|NP_001152082.1| tRNA-specific adenosine deaminase [Zea mays]
 gi|195624114|gb|ACG33887.1| tRNA-specific adenosine deaminase [Zea mays]
 gi|195652465|gb|ACG45700.1| tRNA-specific adenosine deaminase [Zea mays]
          Length = 183

 Score =  167 bits (423), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 50/162 (30%), Positives = 76/162 (46%), Gaps = 21/162 (12%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  ALE+A+ A    E+PVG V V + K+IS   N+    ++ T HAE+ AI +  R  
Sbjct: 5   FMELALEQAKFALDNLEVPVGCVIVEDGKVISSGSNKTNATRNATRHAEMEAIDVLLREW 64

Query: 67  SQ---------EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFY 117
                      E     DLYVT EPC MCA A+S+  IR +Y+G +N K GG  +    +
Sbjct: 65  QSMGLDQPQVAEKFAGCDLYVTCEPCIMCATALSIIGIREVYFGCANDKFGGCGSIMSLH 124

Query: 118 T------------LATCHHSPEIYPGISEQRSRQIIQDFFKE 147
                         A+     +   GI  + +  + + F+++
Sbjct: 125 NGAASSSDDLSGSQASKPKGFKCTGGIMAEEAVALFRCFYEQ 166


>gi|170106123|ref|XP_001884273.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164640619|gb|EDR04883.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 183

 Score =  167 bits (423), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 51/150 (34%), Positives = 77/150 (51%), Gaps = 8/150 (5%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR--M 61
            + +M  AL  A+ A   +E+PVG V V +  II++A NR  EL + T HAE+ AI   M
Sbjct: 5   HDRWMREALTMAEEALAASEVPVGCVFVRDGIIIAKARNRTNELCNATRHAELEAIDSIM 64

Query: 62  GCRILSQEI----LPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFY 117
             R L+ EI    L    LYVT+EPC MCA+A+    I+ ++YG +N + GG  +     
Sbjct: 65  ADRSLTPEISEYPLSNTTLYVTVEPCIMCASALRQMGIKEVFYGCANDRFGGCGSVLGVN 124

Query: 118 T--LATCHHSPEIYPGISEQRSRQIIQDFF 145
                  H S     G   + +  +++ F+
Sbjct: 125 ERLPHPTHPSYSATGGYYREEAIMMLRRFY 154


>gi|66806365|ref|XP_636905.1| adenosine deaminase, tRNA-specific [Dictyostelium discoideum AX4]
 gi|60465302|gb|EAL63394.1| adenosine deaminase, tRNA-specific [Dictyostelium discoideum AX4]
          Length = 254

 Score =  167 bits (423), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 45/152 (29%), Positives = 72/152 (47%), Gaps = 7/152 (4%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +     FM  A+EE   A    E+PV  V V   +II+R  N+    K+ T HAE+ A  
Sbjct: 44  LSNHKKFMEAAIEEGYKALKEGEVPVACVIVYKGEIIARGSNKTNIKKNGTRHAELEAFD 103

Query: 61  M------GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGT 114
                          +L E DLYVT+EPC MC+ A+   +I+R+++G  N K GG  +  
Sbjct: 104 QIFLNKELNDRFKDSLLEECDLYVTVEPCLMCSVALQFCKIKRVFFGCHNDKFGGNGSVY 163

Query: 115 QFYTLATCHHSP-EIYPGISEQRSRQIIQDFF 145
           +       +  P     G+ + ++  ++Q F+
Sbjct: 164 ELNFSPISNGRPYNCITGLLKNQAILLLQLFY 195


>gi|320334320|ref|YP_004171031.1| tRNA(Ile)-lysidine synthase [Deinococcus maricopensis DSM 21211]
 gi|319755609|gb|ADV67366.1| tRNA(Ile)-lysidine synthase [Deinococcus maricopensis DSM 21211]
          Length = 529

 Score =  167 bits (423), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 52/147 (35%), Positives = 75/147 (51%), Gaps = 2/147 (1%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
            +V M  AL  A+ A    E+PVGAV    + ++++RA N  R   D+T HAE+ A+R  
Sbjct: 382 DHVAMGEALAAAREAFGNAEVPVGAVITGPDGQVVARAANTARAHGDMTRHAELDALRAA 441

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
              L    L    LYVTLEPC MC  A   AR+ R+ +GA NPK G +   T     A  
Sbjct: 442 AATLGTAYLTGCTLYVTLEPCPMCLGAALEARVSRIVFGARNPKLGALGGVTDVLAYAW- 500

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
            H P++  G+  + +  ++   F+  R
Sbjct: 501 GHRPDVQGGVRAREASALLTGAFRTYR 527


>gi|169642534|gb|AAI60619.1| Adat2 protein [Danio rerio]
          Length = 238

 Score =  166 bits (422), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 49/151 (32%), Positives = 78/151 (51%), Gaps = 8/151 (5%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM--- 61
             +M+ A + A  A    E+PVG + V NN+II +  N   E K+ T HAE++A+     
Sbjct: 22  QTWMAKAFDMAVEAFENGEVPVGCLMVYNNEIIGKGRNEVNETKNATRHAEMVALDQVLD 81

Query: 62  GCR---ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
            CR      +E+  +  LYVT+EPC MCAAA+ L RI  + YG  N + GG  +     +
Sbjct: 82  WCRLREKDCKEVCEQTVLYVTVEPCIMCAAALRLLRIPFVVYGCKNERFGGCGSVLDVSS 141

Query: 119 LATCH--HSPEIYPGISEQRSRQIIQDFFKE 147
               H   S +   G   + + ++++ F+K+
Sbjct: 142 DHLPHTGTSFKCIAGYRAEEAVEMLKTFYKQ 172


>gi|294786275|ref|ZP_06751529.1| cytidine and deoxycytidylate deaminase family protein
           [Parascardovia denticolens F0305]
 gi|315225809|ref|ZP_07867597.1| cytidine and deoxycytidylate deaminase [Parascardovia denticolens
           DSM 10105]
 gi|294485108|gb|EFG32742.1| cytidine and deoxycytidylate deaminase family protein
           [Parascardovia denticolens F0305]
 gi|315119941|gb|EFT83073.1| cytidine and deoxycytidylate deaminase [Parascardovia denticolens
           DSM 10105]
          Length = 158

 Score =  166 bits (422), Expect = 9e-40,   Method: Composition-based stats.
 Identities = 41/128 (32%), Positives = 64/128 (50%), Gaps = 1/128 (0%)

Query: 23  EIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81
           ++PVGAV V    K+++++GN  +  K   +HAEI  ++ G        L    L VTLE
Sbjct: 27  DVPVGAVLVDPQGKVLAQSGNGRQRGKGPLSHAEIEVMQAGAAAWGSWNLEGCTLVVTLE 86

Query: 82  PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141
           PC MCA A   A + R+ +GA + K G   +             PE+  G+ E   + ++
Sbjct: 87  PCPMCAGAAVSAHLGRIVFGAWDQKMGACGSVWDIPRDPHIGFQPEVVGGVGEAECQSLL 146

Query: 142 QDFFKERR 149
            +FF+ RR
Sbjct: 147 TNFFRARR 154


>gi|302697295|ref|XP_003038326.1| hypothetical protein SCHCODRAFT_63904 [Schizophyllum commune H4-8]
 gi|300112023|gb|EFJ03424.1| hypothetical protein SCHCODRAFT_63904 [Schizophyllum commune H4-8]
          Length = 194

 Score =  166 bits (422), Expect = 9e-40,   Method: Composition-based stats.
 Identities = 52/154 (33%), Positives = 81/154 (52%), Gaps = 9/154 (5%)

Query: 1   MKK-GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
           M++    +M+ A+  AQ A    E+PVG + V +NKII+ A NR  EL++ T HAE+ AI
Sbjct: 1   MEEVHLKWMAEAMNMAQEALDAGEVPVGCIFVRDNKIIASARNRTNELRNATRHAELEAI 60

Query: 60  RM--GCRILSQEI----LPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENG 113
                 + L+ EI    L    LYVT+EPC MCA+A+    I+ ++YG  N + GG  + 
Sbjct: 61  DRILADKTLTPEICEYPLDTTTLYVTVEPCIMCASALRQLGIKEVFYGCGNDRFGGCGSV 120

Query: 114 TQFYT--LATCHHSPEIYPGISEQRSRQIIQDFF 145
                      H +   +PG   + +  I++ F+
Sbjct: 121 LGVNESVPHPKHPAYRAHPGYLREEAIMILRRFY 154


>gi|167032047|ref|YP_001667278.1| CMP/dCMP deaminase zinc-binding [Pseudomonas putida GB-1]
 gi|166858535|gb|ABY96942.1| CMP/dCMP deaminase zinc-binding [Pseudomonas putida GB-1]
          Length = 159

 Score =  166 bits (422), Expect = 9e-40,   Method: Composition-based stats.
 Identities = 58/148 (39%), Positives = 82/148 (55%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
            +   FM  AL  A   A   E+PVGAV V + ++I +  NR     D +AHAE++AIR 
Sbjct: 9   SRDQEFMRLALALAAEGAALGEVPVGAVLVQHGQVIGQGFNRPIIDSDPSAHAEMVAIRA 68

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
             +  S   LP   LYVTLEPC+MCA  I  +R+ R+ +GA  PK G +++  QF+    
Sbjct: 69  AAKAASNYRLPGSTLYVTLEPCSMCAGLIVHSRVMRVVFGALEPKAGIVQSQGQFFGQGF 128

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H   +  G+  +   QI+ DFFK RR
Sbjct: 129 LNHRVIVEGGVLAEACGQILSDFFKARR 156


>gi|238014692|gb|ACR38381.1| unknown [Zea mays]
          Length = 183

 Score =  166 bits (422), Expect = 9e-40,   Method: Composition-based stats.
 Identities = 50/163 (30%), Positives = 76/163 (46%), Gaps = 21/163 (12%)

Query: 6   VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
            FM  ALE+A+ A    E+PVG V V + K+IS   N+    ++ T HAE+ AI +  R 
Sbjct: 4   AFMELALEQAKFALDNLEVPVGCVIVEDGKVISSGSNKTNATRNATRHAEMEAIDVLLRE 63

Query: 66  LSQ---------EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116
                       E     DLYVT EPC MCA A+S+  IR +Y+G +N K GG  +    
Sbjct: 64  WQSMGLDQPQVAEKFAGCDLYVTCEPCIMCATALSIIGIREVYFGCANDKFGGCGSIMSL 123

Query: 117 YT------------LATCHHSPEIYPGISEQRSRQIIQDFFKE 147
           +              A+     +   GI  + +  + + F+++
Sbjct: 124 HNGAASSSDELSGSQASTPKGFKCTGGIMAEEAVALFRCFYEQ 166


>gi|323499747|ref|ZP_08104710.1| tRNA-specific adenosine deaminase [Vibrio sinaloensis DSM 21326]
 gi|323315193|gb|EGA68241.1| tRNA-specific adenosine deaminase [Vibrio sinaloensis DSM 21326]
          Length = 129

 Score =  166 bits (421), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 46/105 (43%), Positives = 61/105 (58%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
               +M  AL  A+ A    E+PVGAV V N+++I    NR     D TAHAEI+A+R G
Sbjct: 18  DHEYWMRHALTLAKRAWDEREVPVGAVLVHNHRVIGEGWNRPIGRHDPTAHAEIMALRQG 77

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKG 107
             +L    L +  LYVTLEPC MCA A+  +RI R+ +GA + K 
Sbjct: 78  GLVLQNYRLLDTTLYVTLEPCVMCAGAMVHSRIGRVVFGARDDKN 122


>gi|159903565|ref|YP_001550909.1| putative cytidine/deoxycytidylate deaminase [Prochlorococcus
           marinus str. MIT 9211]
 gi|159888741|gb|ABX08955.1| putative cytidine/deoxycytidylate deaminase [Prochlorococcus
           marinus str. MIT 9211]
          Length = 165

 Score =  166 bits (421), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 41/148 (27%), Positives = 72/148 (48%), Gaps = 1/148 (0%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRM 61
           K   +M   L  A      +E+PV A+ + N    I    N     +D   HAE++A+R 
Sbjct: 13  KTREWMRRLLNRANELGKEDEVPVIAMILDNKGHCIGHGRNTRNTERDPLGHAELVALRQ 72

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
              +       +  + VTLEPC MCA A+  AR+ ++ +GA + K GG+          +
Sbjct: 73  AKWLKKDWRFNDCTIIVTLEPCQMCAGALIQARMGKVIFGAPDTKRGGLGGSIDLSIHKS 132

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            HH   ++ G+ +  ++++I+ +F +RR
Sbjct: 133 AHHKMIVHGGVMKYEAQELIRKWFSQRR 160


>gi|163737476|ref|ZP_02144893.1| CMP/dCMP deaminase, zinc-binding protein [Phaeobacter gallaeciensis
           BS107]
 gi|161389002|gb|EDQ13354.1| CMP/dCMP deaminase, zinc-binding protein [Phaeobacter gallaeciensis
           BS107]
          Length = 147

 Score =  166 bits (421), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 77/143 (53%), Positives = 99/143 (69%), Gaps = 1/143 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  AL EA+ AA R E+PVGAV +  + +I +RAGNR REL D TAHAE+L IR  C + 
Sbjct: 1   MDIALTEARAAAARGEVPVGAVLIAPDGQIAARAGNRTRELSDPTAHAEVLVIREACAVA 60

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
             E L   DLYVTLEPC MCAAAI+ ARIRR+YYGAS+PK GG+ +G   ++    HH+P
Sbjct: 61  GSERLNGHDLYVTLEPCAMCAAAIAAARIRRVYYGASDPKSGGVAHGACVFSHPQAHHAP 120

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+Y GIS + +  +++ FF  RR
Sbjct: 121 EVYEGISAEPAETLLKAFFAARR 143


>gi|32490887|ref|NP_871141.1| hypothetical protein WGLp138 [Wigglesworthia glossinidia
           endosymbiont of Glossina brevipalpis]
 gi|25166093|dbj|BAC24284.1| yfhC [Wigglesworthia glossinidia endosymbiont of Glossina
           brevipalpis]
          Length = 151

 Score =  165 bits (420), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 49/142 (34%), Positives = 72/142 (50%), Gaps = 1/142 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  AL  A  A    EIP+G+V +L + II    N++ +  D +AHAEILA+R   + ++
Sbjct: 1   MYHALYLANKAKKFGEIPIGSVVILKDNIIGEGWNQSIKKNDPSAHAEILALRSAGKNIN 60

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
              L   ++Y T+EPC MC  AI  AR+ RL +GA   K                +H   
Sbjct: 61  NYRLLNTEIYTTIEPCIMCIGAIINARVSRLIFGARKTKKINF-FTKDLLNNCNLNHKIS 119

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
           +  GI E+  ++II  FF + R
Sbjct: 120 LTEGILEENCKKIINKFFSKIR 141


>gi|4580029|gb|AAD24212.1|AF086638_2 CumB [Pseudomonas putida GB-1]
          Length = 145

 Score =  165 bits (420), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 51/126 (40%), Positives = 74/126 (58%)

Query: 24  IPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83
           +PVGAV V + ++I +  NR     D +AHAE++AIR   +  S   LP   LYVTLEPC
Sbjct: 17  VPVGAVLVQHGQVIGQGFNRPIIDSDPSAHAEMVAIRAAAKAASNYRLPGSTLYVTLEPC 76

Query: 84  TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQD 143
           +MCA  I  +R+ R+ +GA  PK G +++  QF+     +H   +  G+  +   QI+ D
Sbjct: 77  SMCAGLIVHSRVMRVVFGALEPKAGIVQSQGQFFGQGFLNHRVIVEGGVLAEACGQILSD 136

Query: 144 FFKERR 149
           FFK RR
Sbjct: 137 FFKARR 142


>gi|327403312|ref|YP_004344150.1| CMP/dCMP deaminase zinc-binding protein [Fluviicola taffensis DSM
           16823]
 gi|327318820|gb|AEA43312.1| CMP/dCMP deaminase zinc-binding protein [Fluviicola taffensis DSM
           16823]
          Length = 148

 Score =  165 bits (419), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 59/147 (40%), Positives = 80/147 (54%), Gaps = 5/147 (3%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
               FM  A  EAQ A    E+PVGAV V+NN+II+RA N    L DVTAHAE+ AI   
Sbjct: 6   NDEYFMRQAYMEAQKAFELGEVPVGAVVVVNNQIIARAHNLTERLHDVTAHAEMQAITAA 65

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
              L  + L +  LYVTLEPC MCA A+  +++ ++ + + + K G      + Y     
Sbjct: 66  SEYLGAKYLKDCTLYVTLEPCVMCAGALYWSQLNKIIFASRDEKRGAGRFQNELY----- 120

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           H    +  G  EQ   Q++ DFFKE+R
Sbjct: 121 HPKTVVSKGPMEQECAQLMIDFFKEKR 147


>gi|255580984|ref|XP_002531310.1| tRNA-specific adenosine deaminase subunit TAD2, putative [Ricinus
           communis]
 gi|223529101|gb|EEF31082.1| tRNA-specific adenosine deaminase subunit TAD2, putative [Ricinus
           communis]
          Length = 223

 Score =  165 bits (419), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 49/160 (30%), Positives = 79/160 (49%), Gaps = 18/160 (11%)

Query: 6   VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
            +M  ALE+A++A    E+PVG V V + K+I+   NR  E ++ T HAE+ AI +    
Sbjct: 45  AYMELALEQARHALDSLEVPVGCVIVEDGKVIASGRNRTTETRNATRHAEMEAIDVLLEQ 104

Query: 66  LSQ---------EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116
             +         E   +  LYVT EPC MCAAA+S+  I  +YYG +N K GG  +    
Sbjct: 105 WQKGGLSVSEVAEKFSKCVLYVTCEPCIMCAAALSILGIEEVYYGCANDKFGGCGSILPL 164

Query: 117 YTLAT---------CHHSPEIYPGISEQRSRQIIQDFFKE 147
           ++ +T              +   GI    +  +++ F+++
Sbjct: 165 HSSSTQSLTSGVVAQGKGFKCTGGIMASEAVSLLRCFYEQ 204


>gi|306821661|ref|ZP_07455259.1| tRNA-specific adenosine deaminase [Eubacterium yurii subsp.
           margaretiae ATCC 43715]
 gi|304550406|gb|EFM38399.1| tRNA-specific adenosine deaminase [Eubacterium yurii subsp.
           margaretiae ATCC 43715]
          Length = 153

 Score =  165 bits (419), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 50/145 (34%), Positives = 75/145 (51%), Gaps = 1/145 (0%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
             FM  AL  A  A +++E+PVG V V  +++I+   N  +  K    HAEILAI    R
Sbjct: 4   EKFMKKALSNAIRAYIQDEVPVGCVIVKGDEVIASTYNTKKATKSAINHAEILAIDEASR 63

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
            L + IL + D+YVTLEPC MC  AI  +RI+++Y GA++   G   +          + 
Sbjct: 64  KLGRFILDDCDMYVTLEPCLMCTGAILQSRIKKVYIGATDESMGAFVSKIALVKDEMIYP 123

Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149
             +I     +  S  I+  FF++ R
Sbjct: 124 Q-KIDYAFKKTISGYILSRFFRKIR 147


>gi|221129263|ref|XP_002158148.1| PREDICTED: similar to tRNA-specific adenosine deaminase [Hydra
           magnipapillata]
          Length = 226

 Score =  165 bits (419), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 46/163 (28%), Positives = 77/163 (47%), Gaps = 23/163 (14%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR--- 60
              FM  AL  A+ A  + E+PVG V + +N +I+   N     K+ T HAEI+A+    
Sbjct: 43  NEEFMKKALVMAKVALEKGEVPVGCVIIHDNIVIADGYNDVNRTKNATRHAEIIALEKAR 102

Query: 61  ----MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116
                  + L+   + E  LYVT EPC MCAAA+ ++ +++++YG +N + GG  +    
Sbjct: 103 FYFLQAGKNLNS--MSECVLYVTTEPCIMCAAALRISGLKKVFYGCTNQRFGGCGSRLDV 160

Query: 117 YTLAT--------------CHHSPEIYPGISEQRSRQIIQDFF 145
            ++ T                 + E   G   Q S  +++ F+
Sbjct: 161 SSIKTEAKSKSNLSQCELQMSSNLECISGCLSQESINLLKLFY 203


>gi|223997732|ref|XP_002288539.1| hypothetical protein THAPSDRAFT_268551 [Thalassiosira pseudonana
           CCMP1335]
 gi|220975647|gb|EED93975.1| hypothetical protein THAPSDRAFT_268551 [Thalassiosira pseudonana
           CCMP1335]
          Length = 180

 Score =  165 bits (418), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 53/162 (32%), Positives = 79/162 (48%), Gaps = 17/162 (10%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVA---VLNNKIISRAGNRNRELKDVTAHAEIL 57
           M+K   FM  AL  A+ A    E+PVG +      ++ I+S   N+    +D T HAEI+
Sbjct: 1   MEK--YFMRQALCVARTALDIGEVPVGCIVPYMASHSVIVSHGANQVNATRDATRHAEIV 58

Query: 58  AIRMGCRI--------LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109
           AI              L  EI    DLYVT EPC MCAAA+S+  I R+++G  N + GG
Sbjct: 59  AIDRMLTKGRSSDQLKLPPEIFANCDLYVTCEPCIMCAAALSVMGIGRVFFGCRNDRFGG 118

Query: 110 IENGTQFYTLATC----HHSPEIYPGISEQRSRQIIQDFFKE 147
             +    +   T     HH   I+ G+ E+ +  +++ F+  
Sbjct: 119 CGSILHLHKEDTLQSSKHHGFTIHGGLLEEEAVALLRSFYDR 160


>gi|261749231|ref|YP_003256916.1| putative cytosine/adenosine deaminase [Blattabacterium sp.
           (Periplaneta americana) str. BPLAN]
 gi|261497323|gb|ACX83773.1| putative cytosine/adenosine deaminase [Blattabacterium sp.
           (Periplaneta americana) str. BPLAN]
          Length = 141

 Score =  165 bits (418), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 54/144 (37%), Positives = 80/144 (55%), Gaps = 8/144 (5%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  ALEEA  A  ++E+P+GA     N II+RA N    L D+TAHAE+L I +    L 
Sbjct: 1   MKIALEEALIAFHKDEVPIGAAITYENGIIARAHNLTETLSDITAHAEMLVINLASDYLG 60

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
           ++ + E  LYVT+EPC MCA A+  ++I R+  G  N K G +  G +       H   +
Sbjct: 61  KKYIQECTLYVTMEPCIMCAGALFFSQIGRVVCGTLNYKRGFLYTGIKL------HPRTK 114

Query: 128 IYPGISEQRSRQIIQD--FFKERR 149
              GI + + + ++Q+  FFK +R
Sbjct: 115 FLSGIMKNQCKNLLQEFFFFKRKR 138


>gi|304319888|ref|YP_003853531.1| cytidine and deoxycytidylate deaminase family protein [Parvularcula
           bermudensis HTCC2503]
 gi|303298791|gb|ADM08390.1| cytidine and deoxycytidylate deaminase family protein [Parvularcula
           bermudensis HTCC2503]
          Length = 172

 Score =  165 bits (418), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 60/146 (41%), Positives = 76/146 (52%), Gaps = 1/146 (0%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
             +M  AL  A  AA   E+PVGAV +    ++I+ A N      D TAHAE+  +R G 
Sbjct: 14  ERWMDHALGLASMAARNGEVPVGAVLLSATGQLIAEAVNTPIAQCDPTAHAELAVLRKGA 73

Query: 64  RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123
                  L    L VTLEPC MCA AI  ARI  L YGA +PKGG + +G   +   T H
Sbjct: 74  LATGNYRLTGTTLLVTLEPCAMCAGAICHARIGHLVYGADDPKGGAVRHGATLFDQVTTH 133

Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149
           H P +  GI    S  +++ FF ERR
Sbjct: 134 HRPRVTAGIRADESAALLRSFFAERR 159


>gi|83952775|ref|ZP_00961505.1| cytidine and deoxycytidylate deaminase family protein [Roseovarius
           nubinhibens ISM]
 gi|83835910|gb|EAP75209.1| cytidine and deoxycytidylate deaminase family protein [Roseovarius
           nubinhibens ISM]
          Length = 151

 Score =  165 bits (418), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 76/143 (53%), Positives = 95/143 (66%), Gaps = 1/143 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  AL+EA+ AA R E+PVGAV V  +  +I+  GNR R   D TAHAE+L IR GC +L
Sbjct: 1   MDRALDEARAAAARGEVPVGAVLVGPDGAVIAADGNRTRAGHDPTAHAEMLVIRAGCAVL 60

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
             E L   DLYVTLEPC MCAAAIS AR+ R+YYGA +PK GG+ +G + ++   CHH P
Sbjct: 61  GVERLTGCDLYVTLEPCAMCAAAISAARVARVYYGAGDPKSGGVAHGARVFSHPQCHHVP 120

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           EIY GI    S  +++ FF  RR
Sbjct: 121 EIYDGIGGAESEALLRAFFAARR 143


>gi|312877655|ref|ZP_07737611.1| CMP/dCMP deaminase zinc-binding [Caldicellulosiruptor lactoaceticus
           6A]
 gi|311795548|gb|EFR11921.1| CMP/dCMP deaminase zinc-binding [Caldicellulosiruptor lactoaceticus
           6A]
          Length = 175

 Score =  165 bits (418), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 51/142 (35%), Positives = 77/142 (54%), Gaps = 6/142 (4%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M   +E A  +   N+IPV A  V + +IIS    +  + K    HAEILAI      LS
Sbjct: 39  MKTLIEYASRS---NDIPVAAAVVKDGRIISI---KRNDSKKAIYHAEILAIIDATSKLS 92

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
            + L   +++VT EPC MC +AI L++++RLY+GA + K G  E+          +H  E
Sbjct: 93  TKDLRSCEMFVTKEPCPMCMSAIVLSKVKRLYFGARDFKMGAAESCFNLSQHPFLNHKVE 152

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
           +  GI E   R +++ FF+E+R
Sbjct: 153 VIGGICEDECRLLLKRFFEEKR 174


>gi|226303819|ref|YP_002763777.1| tRNA-specific adenosine deaminase [Rhodococcus erythropolis PR4]
 gi|226182934|dbj|BAH31038.1| putative tRNA-specific adenosine deaminase [Rhodococcus
           erythropolis PR4]
          Length = 153

 Score =  165 bits (418), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 3/149 (2%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKI-ISRAGNRNRELKDVTAHAEILAIRM 61
                +  A+  A++A+   ++PVGAV    + + ++RA N      D TAHAEILA+R 
Sbjct: 5   DDQRMIRAAIVAARSASDA-DVPVGAVVFDADGVEVARAANAREAASDPTAHAEILALRA 63

Query: 62  GCRILSQ-EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
             +I      L    L VTLEPCTMCA A+ LAR+ R+ +GA  PK G + +        
Sbjct: 64  AAKIYGDGWRLEGATLAVTLEPCTMCAGALVLARVSRVVFGAWEPKTGAVGSLWDVVRDK 123

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
              + P++  G+ E     +++DFF+E+R
Sbjct: 124 RLTYRPQVRGGVLEDECAGLLEDFFREQR 152


>gi|308802662|ref|XP_003078644.1| putative deaminase (ISS) [Ostreococcus tauri]
 gi|116057097|emb|CAL51524.1| putative deaminase (ISS) [Ostreococcus tauri]
          Length = 247

 Score =  164 bits (417), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 51/159 (32%), Positives = 74/159 (46%), Gaps = 17/159 (10%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLN--NKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M  ALE A+    R E+P+GAV V N   ++++   N      D TAHAE+ AIRMG   
Sbjct: 75  MRRALEIARFGGARGEVPIGAVIVENDTGRVVAACANACERDGDPTAHAELRAIRMGAET 134

Query: 66  LSQEI-LPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFY------- 117
           L     L +  +YVTLEPC MCA  I  AR+ R+ YGA N   G   +            
Sbjct: 135 LGNWRHLRKTTMYVTLEPCAMCAGGILQARVGRVVYGAKNALLGADGSWVSVLRKSDAVD 194

Query: 118 -------TLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
                           ++  G+  + +  ++++FF+ RR
Sbjct: 195 ESAATTTRPHAFSPDLDVTGGVLAEETGALMKEFFRARR 233


>gi|262276493|ref|ZP_06054302.1| tRNA-specific adenosine-34 deaminase [Grimontia hollisae CIP
           101886]
 gi|262220301|gb|EEY71617.1| tRNA-specific adenosine-34 deaminase [Grimontia hollisae CIP
           101886]
          Length = 174

 Score =  164 bits (417), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 40/109 (36%), Positives = 60/109 (55%)

Query: 41  GNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
            NR     D TAHAE++A+R   + L    L E  LYVTLEPC MCA+A+  +RI ++ +
Sbjct: 44  WNRLIGQHDATAHAEMMALRQAGKKLQNYRLLEAVLYVTLEPCPMCASAMVHSRIGKVVF 103

Query: 101 GASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
           GA + K G   +     +    +H  +   G+ E+  R+ +Q FF+ RR
Sbjct: 104 GAPDYKTGAAGSVMNLLSYDGVNHHVQFQGGVLEEECREQLQAFFRRRR 152


>gi|312126379|ref|YP_003991253.1| cmp/dcmp deaminase zinc-binding protein [Caldicellulosiruptor
           hydrothermalis 108]
 gi|311776398|gb|ADQ05884.1| CMP/dCMP deaminase zinc-binding protein [Caldicellulosiruptor
           hydrothermalis 108]
          Length = 171

 Score =  164 bits (417), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 53/142 (37%), Positives = 77/142 (54%), Gaps = 6/142 (4%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M   +E A  +   N+IPV A  V N KIIS    +  + K    HAEILAI      LS
Sbjct: 35  MKTLIEYASRS---NDIPVAAAVVKNGKIISI---KRNDSKKAIYHAEILAIIDATSKLS 88

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
            + L   +++VT EPC MC +AI L++++RLY+GA + K G  E+          +H  E
Sbjct: 89  TKDLRSCEMFVTKEPCPMCMSAIVLSKVKRLYFGARDFKMGAAESCFNLSQNPFLNHKVE 148

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
           +  GI E   R +++ FF+E+R
Sbjct: 149 VIGGICEDECRLLLKRFFEEKR 170


>gi|111021134|ref|YP_704106.1| tRNA-specific adenosine deaminase [Rhodococcus jostii RHA1]
 gi|110820664|gb|ABG95948.1| probable tRNA-specific adenosine deaminase [Rhodococcus jostii
           RHA1]
          Length = 123

 Score =  164 bits (417), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 49/122 (40%), Positives = 66/122 (54%), Gaps = 1/122 (0%)

Query: 29  VAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQ-EILPEVDLYVTLEPCTMCA 87
           V   +   +SRA N    + D TAHAEI+A+R   R+      L    L VTLEPCTMCA
Sbjct: 2   VFDADGVEVSRAVNSREAMSDPTAHAEIIALRAAARVYGDGWRLEGATLAVTLEPCTMCA 61

Query: 88  AAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
            A+ LARI R+ +GA  PK G + +           H P++  G+ E     I++DFF+E
Sbjct: 62  GALVLARISRVVFGAWEPKTGAVGSLWDVVRDRRLTHRPQVRGGVLEDECAGILEDFFRE 121

Query: 148 RR 149
           RR
Sbjct: 122 RR 123


>gi|149914091|ref|ZP_01902623.1| cytidine and deoxycytidylate deaminase family protein [Roseobacter
           sp. AzwK-3b]
 gi|149812375|gb|EDM72206.1| cytidine and deoxycytidylate deaminase family protein [Roseobacter
           sp. AzwK-3b]
          Length = 157

 Score =  164 bits (417), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 72/129 (55%), Positives = 90/129 (69%), Gaps = 1/129 (0%)

Query: 22  NEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80
            E+PVGAV V    +I++RAGNR REL D TAHAEIL IR  C  +  E LP   LYVTL
Sbjct: 21  GEVPVGAVLVDPKGRIVARAGNRTRELSDPTAHAEILVIREACAAVGSERLPGYALYVTL 80

Query: 81  EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140
           EPC MCA AIS ARI RLYYGAS+PK GG+ +G + ++   CHH PEIY GI+   +  +
Sbjct: 81  EPCAMCATAISAARIARLYYGASDPKSGGVAHGARVFSHPQCHHVPEIYDGIAAAEAEAL 140

Query: 141 IQDFFKERR 149
           ++ FF++RR
Sbjct: 141 LKAFFRDRR 149


>gi|323697968|ref|ZP_08109880.1| CMP/dCMP deaminase, zinc-binding [Desulfovibrio sp. ND132]
 gi|323457900|gb|EGB13765.1| CMP/dCMP deaminase, zinc-binding [Desulfovibrio desulfuricans
           ND132]
          Length = 144

 Score =  164 bits (417), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 49/143 (34%), Positives = 68/143 (47%), Gaps = 1/143 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  A  EA  AA   E PVGA        +++ A NR     D T HAEIL +R   R+L
Sbjct: 1   MDVAFGEACKAAQAGEAPVGAALFTPTGTLLASAHNRPIAAHDPTGHAEILCLREAARVL 60

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               LP+  L VTLEPC MC  A+  AR+  + + A + + G + +  Q   L   +H  
Sbjct: 61  RNYRLPDTILAVTLEPCLMCTGALIHARVAGVVFAARDERAGALVSNMQGCALPFTNHRL 120

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
               G+       +++ FF ERR
Sbjct: 121 WTVEGVMGNECSALLKRFFLERR 143


>gi|41406377|ref|NP_959213.1| hypothetical protein MAP0279 [Mycobacterium avium subsp.
           paratuberculosis K-10]
 gi|41394725|gb|AAS02596.1| hypothetical protein MAP_0279 [Mycobacterium avium subsp.
           paratuberculosis K-10]
          Length = 152

 Score =  164 bits (417), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 57/151 (37%), Positives = 77/151 (50%), Gaps = 3/151 (1%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAI 59
           M      +  AL  A  A  R ++P+GAV V  +   ++RA N    L D TAHAEILA+
Sbjct: 1   MISDEDLIRSALAVAATAGPR-DVPIGAVVVGADGTELARAVNAREALGDPTAHAEILAL 59

Query: 60  RMGCRILSQ-EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
           R     L     L    L VT+EPCTMCA A+ LARI RL +GA  PK G + +      
Sbjct: 60  RAAAAALGDGWRLEGATLAVTVEPCTMCAGALVLARIARLVFGAWEPKTGAVGSLWDVVR 119

Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
               +H PE+  G+ E+     ++ FF  +R
Sbjct: 120 DRRLNHRPEVRGGVLERECAAPLEGFFARQR 150


>gi|79361008|ref|NP_564523.3| emb2191 (embryo defective 2191); catalytic/ hydrolase/ zinc ion
           binding [Arabidopsis thaliana]
 gi|48310033|gb|AAT41740.1| At1g48175 [Arabidopsis thaliana]
 gi|50198832|gb|AAT70448.1| At1g48175 [Arabidopsis thaliana]
 gi|332194138|gb|AEE32259.1| Cytidine/deoxycytidylate deaminase family protein [Arabidopsis
           thaliana]
          Length = 182

 Score =  164 bits (416), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 47/164 (28%), Positives = 77/164 (46%), Gaps = 17/164 (10%)

Query: 1   MKKGNV-----FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAE 55
           M++ +      +M  AL +A+ A    E+PVG V + + K+I+   NR  E ++ T HAE
Sbjct: 1   MEEDHCEDSHNYMGFALHQAKLALEALEVPVGCVFLEDGKVIASGRNRTNETRNATRHAE 60

Query: 56  ILAIRM-GCRILSQ--------EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPK 106
           + AI     +            E   +  LYVT EPC MCA+A+S   I+ +YYG  N K
Sbjct: 61  MEAIDQLVGQWQKDGLSPSQVAEKFSKCVLYVTCEPCIMCASALSFLGIKEVYYGCPNDK 120

Query: 107 GGGIENGTQFY---TLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
            GG  +    +     A      +   GI  + +  + + F+++
Sbjct: 121 FGGCGSILSLHLGSEEAQRGKGYKCRGGIMAEEAVSLFKCFYEQ 164


>gi|158522912|ref|YP_001530782.1| CMP/dCMP deaminase zinc-binding [Desulfococcus oleovorans Hxd3]
 gi|158511738|gb|ABW68705.1| CMP/dCMP deaminase zinc-binding [Desulfococcus oleovorans Hxd3]
          Length = 157

 Score =  164 bits (416), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 43/149 (28%), Positives = 65/149 (43%), Gaps = 6/149 (4%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEI-PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
           M+  + FM  A+E A+      +  P GAV V + +I+    NR     D TAH EI+AI
Sbjct: 1   MEMHDAFMRRAIELARAGMKAGDGGPFGAVVVRDGQIVGEGANRVLAHNDPTAHGEIVAI 60

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENG----TQ 115
           R   + L    L    LY T +PC MC  AI  A I+ +Y+G S    G +         
Sbjct: 61  RDAAKRLGTYDLDGCVLYTTGQPCPMCLGAIYWAHIQTVYFGFSIVDAGTVGFNDAVIFN 120

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDF 144
            + L          P +    +  ++++F
Sbjct: 121 EFALPPEKRRVNCRP-LLTDEAMILLKEF 148


>gi|34541357|ref|NP_905836.1| cytidine/deoxycytidylate deaminase family protein [Porphyromonas
           gingivalis W83]
 gi|34397674|gb|AAQ66735.1| cytidine/deoxycytidylate deaminase family protein [Porphyromonas
           gingivalis W83]
          Length = 150

 Score =  164 bits (416), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 44/134 (32%), Positives = 59/134 (44%), Gaps = 5/134 (3%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  A+  A  +      P GAV V + +II+   NR     D TAHAE+  IRM C+ L 
Sbjct: 2   MREAIRLADESVANGGGPFGAVIVKDGEIIAATSNRVTLDNDPTAHAEVNCIRMACKRLG 61

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF----YTLATCH 123
              L    +Y + EPC MC  AI  ARI R++YG +      I     F          +
Sbjct: 62  TFDLSGCTIYTSCEPCPMCLGAIYWARIDRIFYGNNRQDAADIGFDDDFIYQELARPMDN 121

Query: 124 HSPEIYPGISEQRS 137
            S  I P I +  +
Sbjct: 122 RSTPIIP-ILQDEA 134


>gi|299115717|emb|CBN74282.1| tRNA specific adenosine deaminase [Ectocarpus siliculosus]
          Length = 186

 Score =  164 bits (416), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 49/151 (32%), Positives = 78/151 (51%), Gaps = 5/151 (3%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLN--NKIISRAGNRNRELKDVTAHAEILAI 59
           ++  V+M  AL+EA+ A  + E+PVG V V     +IIS   N   E  + T HAE++AI
Sbjct: 12  EQNAVYMRLALKEAEMALSKGEVPVGCVVVHKPTARIISCGHNETSEAFNATRHAELVAI 71

Query: 60  RMGCRILSQ-EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
               R  +   +L E DL+VT EPC MCAAA+   +I+ + +G SN + GG  +    + 
Sbjct: 72  DGILRAQTDLSLLRECDLFVTCEPCIMCAAALRDVKIKTVVFGCSNDRFGGCGSVLSVHD 131

Query: 119 --LATCHHSPEIYPGISEQRSRQIIQDFFKE 147
             L    H+   + G+    +  + + F+  
Sbjct: 132 GSLPISGHTYPCHSGLLADEAIALFKQFYSR 162


>gi|78779266|ref|YP_397378.1| tRNA-adenosine deaminase [Prochlorococcus marinus str. MIT 9312]
 gi|78712765|gb|ABB49942.1| tRNA-adenosine deaminase [Prochlorococcus marinus str. MIT 9312]
          Length = 171

 Score =  163 bits (415), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 47/147 (31%), Positives = 73/147 (49%), Gaps = 6/147 (4%)

Query: 6   VFMSCALEEAQNAALRN--EIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMG 62
            +M+  L   + +      E+P+ ++ +    + I R  NR    KD   HAEI+A+R  
Sbjct: 25  KWMNSIL---RRSEEIGKVELPISSIILDERGRCIGRGVNRRSVNKDPLGHAEIMALRQA 81

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
             I +     E      LEPCTMCA+A+  AR+ ++ +GA + K GG+          + 
Sbjct: 82  SLIKNDWRFNECITITNLEPCTMCASALIQARMGKVVFGAYDKKRGGLGGSIDLSKHKSS 141

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           HH  EI  GI E+   QI+Q +FK+ R
Sbjct: 142 HHKMEIVGGILEEECSQILQLWFKKLR 168


>gi|47207020|emb|CAF91477.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 161

 Score =  163 bits (415), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 45/148 (30%), Positives = 72/148 (48%), Gaps = 8/148 (5%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  A + A++A    E+PVG + V NN+++ R  N   E K+ T HAE++A+        
Sbjct: 1   MDEAFDMAKDALQNGEVPVGCLMVYNNEVVGRGRNEVNETKNATRHAEMVALDELLNWCH 60

Query: 68  QEIL------PEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF--YTL 119
              L       +  LYVT+EPC MCAAA+ L  I  + YG  N + GG  +        L
Sbjct: 61  HSNLDVSKVSRKTVLYVTVEPCVMCAAALRLLNIALVVYGCRNERFGGCGSVLDVSGADL 120

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKE 147
           A    + +   G     + ++++ F+K+
Sbjct: 121 AQTGSTFKCVSGHRADEAVEMLKTFYKQ 148


>gi|319955332|ref|YP_004166599.1| guanine deaminase [Cellulophaga algicola DSM 14237]
 gi|319423992|gb|ADV51101.1| Guanine deaminase [Cellulophaga algicola DSM 14237]
          Length = 158

 Score =  163 bits (414), Expect = 7e-39,   Method: Composition-based stats.
 Identities = 40/120 (33%), Positives = 60/120 (50%), Gaps = 1/120 (0%)

Query: 2   KKGNVFMSCALEEAQNAALRN-EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           ++   FM  A+  A+     N   P GAV V +++II+   NR     D TAHAE++AIR
Sbjct: 3   ERDEFFMKRAIALAEEGMNANAGGPFGAVVVKDDEIIAEGYNRVTSTNDPTAHAEVVAIR 62

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
             C+ L+   L +  +Y + EPC MC  AI   R + +Y+G +      I+   QF    
Sbjct: 63  EACKKLNNFELTDCTIYTSCEPCPMCLGAIYWTRPKMVYFGCNREDAAAIQFDDQFIYDE 122


>gi|78356822|ref|YP_388271.1| tRNA-adenosine deaminase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
 gi|78219227|gb|ABB38576.1| tRNA-adenosine deaminase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
          Length = 172

 Score =  163 bits (414), Expect = 7e-39,   Method: Composition-based stats.
 Identities = 51/161 (31%), Positives = 70/161 (43%), Gaps = 23/161 (14%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVL------------NNKIISRAGNRNRELK 48
            K     M  ALE+A  A L                        +  ++    NR     
Sbjct: 22  WKSWEALMELALEQAVLAQL-----------HGEVPVGAVVVAPDGAVLGSGRNRPIATC 70

Query: 49  DVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGG 108
           D TAHAEILAIR  C       L +  L VTLEPC MC  AI  AR+  + YGAS+ + G
Sbjct: 71  DPTAHAEILAIRQACIHTGNYRLDDAVLVVTLEPCHMCTGAIIHARLAGVVYGASDKRAG 130

Query: 109 GIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +++      L   +H P    G+ E    +++ +FFKE+R
Sbjct: 131 AVDSCLDGLELPFHNHRPWYMSGVCEAECSRLLAEFFKEKR 171


>gi|194246540|ref|YP_002004179.1| Cytosine/adenosine deaminase [Candidatus Phytoplasma mali]
 gi|193806897|emb|CAP18326.1| Cytosine/adenosine deaminase [Candidatus Phytoplasma mali]
          Length = 151

 Score =  163 bits (414), Expect = 7e-39,   Method: Composition-based stats.
 Identities = 51/149 (34%), Positives = 82/149 (55%), Gaps = 1/149 (0%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           + +   FM  A +EA+ A  +NE+PVGAVAVLNN+II+R  N   + +    HAE L + 
Sbjct: 2   LNEDLFFMKEAFKEAKKAYYKNEVPVGAVAVLNNQIIARTHNNCEKKQIFFGHAEFLLMM 61

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              +      L ++++YVTLEPC MCA A+   +I ++YY  +N K G I++        
Sbjct: 62  KLNKKFKNRRLNKINIYVTLEPCLMCAGALIQTQINKVYYSVNNYKSGSIDSVISLLKFK 121

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
              H      G+  + ++ ++++FFK  R
Sbjct: 122 Y-PHKIITESGLLAKENKILLKNFFKNLR 149


>gi|88855909|ref|ZP_01130571.1| cytosine/adenosine deaminase [marine actinobacterium PHSC20C1]
 gi|88814776|gb|EAR24636.1| cytosine/adenosine deaminase [marine actinobacterium PHSC20C1]
          Length = 155

 Score =  163 bits (414), Expect = 7e-39,   Method: Composition-based stats.
 Identities = 52/149 (34%), Positives = 75/149 (50%), Gaps = 1/149 (0%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIR 60
            K + +M+ A+ EA+  A   ++PV A+    N+ ++S   N      D TAHAE++AIR
Sbjct: 7   TKFDQWMTRAVAEAKLTADSADVPVAALVFDENDNLVSIGRNERELTGDPTAHAEVVAIR 66

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
                     L  + L VTLEPCTMCA AI  ARI R+ +GA + K G   +        
Sbjct: 67  AAAAATGSWRLDTMTLVVTLEPCTMCAGAILQARIPRVVFGAWDEKAGAAGSVNDLLRDR 126

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
              H  E+  GI E     ++ +FF+ RR
Sbjct: 127 RLPHKVEVVAGIQEAECAALLTEFFEARR 155


>gi|33519984|ref|NP_878816.1| putative cytosine/adenosine deaminase [Candidatus Blochmannia
           floridanus]
 gi|33504330|emb|CAD83223.1| cytosine/adenosine deaminase zinc-binding region; hydrolase
           activity [Candidatus Blochmannia floridanus]
          Length = 159

 Score =  163 bits (414), Expect = 8e-39,   Method: Composition-based stats.
 Identities = 55/144 (38%), Positives = 76/144 (52%), Gaps = 1/144 (0%)

Query: 6   VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           ++M  A+  A  A L  ++ VGAV V N ++I    N + +  D +AHAEI+A+R+G  +
Sbjct: 9   IWMCYAVMLANIADLNGDVSVGAVLVYNERLIGCGYNASIKNNDPSAHAEIVALRIGAEV 68

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           L    L    LYVTLEPC MC  A+  AR+ +L YGA N K     +    Y    C+H 
Sbjct: 69  LGNYRLLNTTLYVTLEPCMMCIGAMIHARVYKLVYGAHNKKTEYF-SIWNKYIRNDCNHR 127

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
             I  G+ E+     I  FFK RR
Sbjct: 128 FVIKSGVLEKICSDQISSFFKIRR 151


>gi|332969045|gb|EGK08085.1| tRNA-specific adenosine deaminase [Kingella kingae ATCC 23330]
          Length = 246

 Score =  163 bits (414), Expect = 8e-39,   Method: Composition-based stats.
 Identities = 45/117 (38%), Positives = 65/117 (55%)

Query: 20  LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVT 79
              E+PVGAV V   +II++A NR     D+  HAE+ A+ +  + L    L + DLYV+
Sbjct: 113 ECGEVPVGAVVVHRGEIIAQAHNRCIADCDIGRHAEMNALALAGKTLGNYRLADCDLYVS 172

Query: 80  LEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQR 136
           LEPCTMCA+A+  ARIRR+ + AS PK G   +    +T +  +    +  GI    
Sbjct: 173 LEPCTMCASAMIQARIRRVIFAASEPKTGAAGSVINLFTNSQLNQHTAVLGGIMATE 229


>gi|88608086|ref|YP_505986.1| cytidine/deoxycytidylate deaminase family protein [Neorickettsia
           sennetsu str. Miyayama]
 gi|88600255|gb|ABD45723.1| cytidine/deoxycytidylate deaminase family protein [Neorickettsia
           sennetsu str. Miyayama]
          Length = 144

 Score =  163 bits (414), Expect = 8e-39,   Method: Composition-based stats.
 Identities = 56/146 (38%), Positives = 80/146 (54%), Gaps = 4/146 (2%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
              FM  A+  A+ +    E+PVGAV V    +I+ +GNR     D TAHAE+  IR   
Sbjct: 2   DKKFMELAMSVARQSDC--EVPVGAVLVRQGAVIASSGNRVFRDSDPTAHAEMFVIREAI 59

Query: 64  RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123
           + L  + L + +LYVTLEPC MC  A+SL+R+  L + A + K G I NG       T  
Sbjct: 60  QRLGVKFLVDFELYVTLEPCPMCMYAMSLSRVGTLCFAAYDEKRGAISNGC--LGTGTYF 117

Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149
           H P IY G+ E  +++++  FF+  R
Sbjct: 118 HVPIIYEGLMEDEAKELLSSFFRILR 143


>gi|299747155|ref|XP_002911134.1| tRNA specific adenosine deaminase [Coprinopsis cinerea
           okayama7#130]
 gi|298407392|gb|EFI27640.1| tRNA specific adenosine deaminase [Coprinopsis cinerea
           okayama7#130]
          Length = 188

 Score =  163 bits (413), Expect = 9e-39,   Method: Composition-based stats.
 Identities = 48/153 (31%), Positives = 74/153 (48%), Gaps = 9/153 (5%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
            +   +M  A+  A+ A    E+PVG V V + KII++A NR  EL++ T HAE+ AI  
Sbjct: 9   DRHLKWMKEAMNMAEEALAAGEVPVGCVFVRDEKIIAKARNRTNELRNATRHAELEAIDC 68

Query: 62  GC-------RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGT 114
                    +      L    LYVT+EPC MCA+A+    I+ ++YG  N + GG  +  
Sbjct: 69  ILSDNELTPQKGEPYPLSTTTLYVTVEPCIMCASALRQLGIKEVFYGCGNERFGGCGSVL 128

Query: 115 QFY-TLATCHHSP-EIYPGISEQRSRQIIQDFF 145
                L    H P +   G   + +  I++ F+
Sbjct: 129 GVNQELPHPQHPPYKATAGYCREEAIMILRRFY 161


>gi|283851075|ref|ZP_06368359.1| CMP/dCMP deaminase zinc-binding [Desulfovibrio sp. FW1012B]
 gi|283573471|gb|EFC21447.1| CMP/dCMP deaminase zinc-binding [Desulfovibrio sp. FW1012B]
          Length = 181

 Score =  163 bits (413), Expect = 9e-39,   Method: Composition-based stats.
 Identities = 45/127 (35%), Positives = 68/127 (53%), Gaps = 1/127 (0%)

Query: 24  IPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEP 82
            PVGAV +    +++++ GN      D TAHAEILA+R     +    LP   L VTLEP
Sbjct: 46  TPVGAVLLSGAGEVLAQTGNGPISRADPTAHAEILALRQAAARVGNYRLPGSILVVTLEP 105

Query: 83  CTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQ 142
           C MC  A+  AR+  L YGA +P+ G +++      L   +H  ++  G+    S  +++
Sbjct: 106 CLMCLGAMIHARVGLLVYGAPDPRTGAVDSRLPGPDLPFFNHRFDVLSGVCADASAALLR 165

Query: 143 DFFKERR 149
            FF+ RR
Sbjct: 166 QFFRNRR 172


>gi|254568360|ref|XP_002491290.1| Subunit of tRNA-specific adenosine-34 deaminase [Pichia pastoris
           GS115]
 gi|238031087|emb|CAY69010.1| Subunit of tRNA-specific adenosine-34 deaminase [Pichia pastoris
           GS115]
 gi|328352193|emb|CCA38592.1| hypothetical protein PP7435_Chr2-0910 [Pichia pastoris CBS 7435]
          Length = 220

 Score =  163 bits (413), Expect = 9e-39,   Method: Composition-based stats.
 Identities = 48/152 (31%), Positives = 79/152 (51%), Gaps = 8/152 (5%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           ++    FM  AL+ AQ A    E+P+G + V  NKII++  N+         HAE+ AI 
Sbjct: 3   LETHFNFMKKALDAAQIALDELEVPIGCIFVYKNKIIAQGSNKTNATSCGINHAEMEAID 62

Query: 61  MGCRILSQE--ILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
                      ILP  DLYVT+EPC MCA+A+    IRR+++G +N + GG  +    ++
Sbjct: 63  EIIAKYPNYKEILPFADLYVTVEPCIMCASALRQLGIRRVFFGCANDRFGGNGSVLTIHS 122

Query: 119 LATCHHSPE-----IYPGISEQRSRQIIQDFF 145
               ++  +     +YPGI  + +  +++ F+
Sbjct: 123 DK-LNNKLDSSIYPVYPGIYAKEAVTLLRKFY 153


>gi|325191113|emb|CCA25599.1| SUMO ligase putative [Albugo laibachii Nc14]
          Length = 182

 Score =  163 bits (413), Expect = 9e-39,   Method: Composition-based stats.
 Identities = 53/143 (37%), Positives = 78/143 (54%), Gaps = 3/143 (2%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  ALEEA+ A +R E+PVG VAV  N+IIS A NR  EL + T HAE++AI       +
Sbjct: 1   MREALEEAERALVRGEVPVGCVAVYQNQIISFASNRTNELCNATKHAELVAIDYIVSNYN 60

Query: 68  QEI--LPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL-ATCHH 124
                  E   YVT EPC MCAAA+   ++ R+ +G  N + GG  +    +   A    
Sbjct: 61  NTRAIFQETTFYVTCEPCIMCAAALLQCKVVRVVFGCQNFRFGGCGSVLSLHEPTANIPR 120

Query: 125 SPEIYPGISEQRSRQIIQDFFKE 147
           +   +PGI    + +++Q F+++
Sbjct: 121 TFSCHPGILRIEAIELLQRFYEQ 143


>gi|297847068|ref|XP_002891415.1| EMB2191 [Arabidopsis lyrata subsp. lyrata]
 gi|297337257|gb|EFH67674.1| EMB2191 [Arabidopsis lyrata subsp. lyrata]
          Length = 192

 Score =  163 bits (413), Expect = 9e-39,   Method: Composition-based stats.
 Identities = 45/165 (27%), Positives = 75/165 (45%), Gaps = 19/165 (11%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           +  + +M  AL +A+ A    E+PVG V + + K+I+   NR  E ++ T HAE+ AI  
Sbjct: 10  EDSHNYMGFALHQAKLALEALEVPVGCVLLEDGKVIASGRNRTNETRNATRHAEMEAIDQ 69

Query: 62  -GCRILSQ--------EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN 112
              +            E   +  LYVT EPC MCA+A+S   I+ +YYG  N K GG  +
Sbjct: 70  LVGQWQEDGLSPSQVAEKFSKCILYVTCEPCIMCASALSFLGIKEVYYGCPNDKFGGCGS 129

Query: 113 GTQFY----------TLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
               +            +      +   GI  + +  + + F+++
Sbjct: 130 ILSLHLGSSQSSDIIEESQRGKGYKCRGGIMAEEAVSLFKCFYEQ 174


>gi|319441800|ref|ZP_07990956.1| putative cytosine/adenosine deaminase [Corynebacterium variabile
           DSM 44702]
          Length = 167

 Score =  162 bits (412), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 48/144 (33%), Positives = 72/144 (50%), Gaps = 4/144 (2%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M+ ALE A  +    ++PVGAV    +   ++ A NR     D TAHAE+LA+R      
Sbjct: 26  MARALEVA-ASTPDGDVPVGAVVYAPDGTELAAATNRREADADPTAHAEVLALRAATAAH 84

Query: 67  SQ-EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
                L +  L VTLEPC MCA A+  AR+R + +GA  P+ G   +       +   H+
Sbjct: 85  GDAWRLTDCTLVVTLEPCAMCAGAMVGARVRTVVFGAWEPRTGACGSVFDVARESPL-HA 143

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
            E+  G+       ++++FF  RR
Sbjct: 144 VEVRGGVLLDECEDLVREFFSSRR 167


>gi|326772679|ref|ZP_08231963.1| cytidine and deoxycytidylate deaminase family protein [Actinomyces
           viscosus C505]
 gi|326637311|gb|EGE38213.1| cytidine and deoxycytidylate deaminase family protein [Actinomyces
           viscosus C505]
          Length = 196

 Score =  162 bits (412), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 56/143 (39%), Positives = 74/143 (51%), Gaps = 1/143 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  ALE A+ A    E+PVGAV +     +++ A N      D TAHAEI A+R     L
Sbjct: 54  MLRALELARAAGEAGEVPVGAVVLSPEGVVLAEAANAREAEHDPTAHAEIRALRAAGAAL 113

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L    L VTLEPCTMCA AI LAR+ RL  GA  P+ G   +          +H  
Sbjct: 114 GDSHLDGCTLVVTLEPCTMCAGAIVLARVARLVLGAWEPRTGACGSVRDVVRDTRANHQV 173

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+  G+  Q S++++  FF +RR
Sbjct: 174 EVRAGLRAQESQELLTAFFADRR 196


>gi|323135792|ref|ZP_08070875.1| CMP/dCMP deaminase, zinc-binding [Methylocystis sp. ATCC 49242]
 gi|322398883|gb|EFY01402.1| CMP/dCMP deaminase, zinc-binding [Methylocystis sp. ATCC 49242]
          Length = 148

 Score =  162 bits (412), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 57/108 (52%), Positives = 77/108 (71%)

Query: 42  NRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
           NR    +D TAHAE+L IR     +  E L + DLYVTLEPC MCA AIS ARIRRLY+ 
Sbjct: 41  NRTLRDRDPTAHAEMLVIRQAAAAIGSERLVDCDLYVTLEPCAMCAGAISFARIRRLYFA 100

Query: 102 ASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
           A +PKGG +++G +F++  TCHH+P++Y GI E  + Q+++DFF+ RR
Sbjct: 101 AEDPKGGAVDHGPRFFSQPTCHHAPDVYGGIRESEAAQLLRDFFRARR 148


>gi|16124486|ref|NP_419050.1| cytidine and deoxycytidylate deaminase family protein [Caulobacter
           crescentus CB15]
 gi|13421360|gb|AAK22218.1| cytidine and deoxycytidylate deaminase family protein [Caulobacter
           crescentus CB15]
          Length = 161

 Score =  162 bits (412), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 57/130 (43%), Positives = 77/130 (59%), Gaps = 2/130 (1%)

Query: 22  NEIPVGAVAVLN--NKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVT 79
            E PVGAV +     ++I+ AGN      D TAHAEI A+R     L    L ++ L VT
Sbjct: 28  GETPVGAVILDPSTGEVIATAGNGPIAAHDPTAHAEIAAMRAAAAKLGNYRLTDLTLVVT 87

Query: 80  LEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139
           LEPC MCA AIS ARI R+ +GA +PKGG + +G +F+   TCH  PE+  G+    S  
Sbjct: 88  LEPCAMCAGAISHARIGRVVFGADDPKGGAVVHGPKFFAQPTCHWRPEVTGGVLADESAD 147

Query: 140 IIQDFFKERR 149
           +++ FF+ RR
Sbjct: 148 LLRGFFRARR 157


>gi|326915810|ref|XP_003204205.1| PREDICTED: tRNA-specific adenosine deaminase 2-like [Meleagris
           gallopavo]
          Length = 165

 Score =  162 bits (412), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 47/148 (31%), Positives = 72/148 (48%), Gaps = 8/148 (5%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M   L EAQ A    E+PVG + V + + I +  N   E K+ T HAE++AI        
Sbjct: 1   MHTKLAEAQEALEAGEVPVGCLLVYDGEAIGKGRNEVNETKNATRHAEMVAIDQVLEWCQ 60

Query: 68  Q------EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL-- 119
           Q      E+     LYVT+EPC MCAAA+ L +I R+ YG  N + GG  +     +   
Sbjct: 61  QHKKAHEEVFSHSVLYVTVEPCIMCAAALRLMKIPRVVYGCRNERFGGCGSVLSISSDDI 120

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKE 147
           A      E   G   + + ++++ F+++
Sbjct: 121 ADTGEPFECIGGYRAKDAVEMLKAFYRQ 148


>gi|319948568|ref|ZP_08022697.1| cytidine and deoxycytidylate deaminase family protein [Dietzia
           cinnamea P4]
 gi|319437767|gb|EFV92758.1| cytidine and deoxycytidylate deaminase family protein [Dietzia
           cinnamea P4]
          Length = 143

 Score =  162 bits (412), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 52/144 (36%), Positives = 74/144 (51%), Gaps = 3/144 (2%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  AL  A       ++PVGAV +  +   ++ A NR     D  AHAE+LA+R   R+L
Sbjct: 1   MRRALAVA-AGTPPEDVPVGAVVIGPDGTELAAATNRRETDGDPFAHAEVLALREAARVL 59

Query: 67  SQ-EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
                L +  L VTLEPCTMCA A   AR+ R+ +GA  P+ G   +           H 
Sbjct: 60  GDGWRLEDCTLVVTLEPCTMCAGAAVAARVGRIVFGAWEPRTGACGSLWDVVRDRRLVHR 119

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
           PE++ G+ E     +++DFF+ RR
Sbjct: 120 PEVHGGVLEDECAAVLEDFFRARR 143


>gi|221233170|ref|YP_002515606.1| tRNA-specific adenosine deaminase [Caulobacter crescentus NA1000]
 gi|220962342|gb|ACL93698.1| tRNA-specific adenosine deaminase [Caulobacter crescentus NA1000]
          Length = 148

 Score =  162 bits (412), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 57/130 (43%), Positives = 77/130 (59%), Gaps = 2/130 (1%)

Query: 22  NEIPVGAVAVLN--NKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVT 79
            E PVGAV +     ++I+ AGN      D TAHAEI A+R     L    L ++ L VT
Sbjct: 15  GETPVGAVILDPSTGEVIATAGNGPIAAHDPTAHAEIAAMRAAAAKLGNYRLTDLTLVVT 74

Query: 80  LEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139
           LEPC MCA AIS ARI R+ +GA +PKGG + +G +F+   TCH  PE+  G+    S  
Sbjct: 75  LEPCAMCAGAISHARIGRVVFGADDPKGGAVVHGPKFFAQPTCHWRPEVTGGVLADESAD 134

Query: 140 IIQDFFKERR 149
           +++ FF+ RR
Sbjct: 135 LLRGFFRARR 144


>gi|23097839|ref|NP_691305.1| hypothetical protein OB0384 [Oceanobacillus iheyensis HTE831]
 gi|22776063|dbj|BAC12340.1| hypothetical conserved protein [Oceanobacillus iheyensis HTE831]
          Length = 159

 Score =  162 bits (412), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 45/122 (36%), Positives = 58/122 (47%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
              +FMS A+E A +   +   P GAV + +NKII+   N+     D TAHAE+ AIR  
Sbjct: 6   NHQLFMSKAIELAVSNISQGGGPFGAVIIKDNKIIAEGTNQVTNYNDPTAHAEVQAIRQA 65

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
           C  LS   L    LY + EPC MC  AI  AR+  +YYGA+      I            
Sbjct: 66  CEKLSTFELKGCTLYTSCEPCPMCLGAIYWARVDAVYYGANRKDAAKINFDDDLIYQEID 125

Query: 123 HH 124
            H
Sbjct: 126 LH 127


>gi|302794668|ref|XP_002979098.1| hypothetical protein SELMODRAFT_109716 [Selaginella moellendorffii]
 gi|300153416|gb|EFJ20055.1| hypothetical protein SELMODRAFT_109716 [Selaginella moellendorffii]
          Length = 162

 Score =  162 bits (411), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 48/149 (32%), Positives = 75/149 (50%), Gaps = 16/149 (10%)

Query: 14  EAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM-------GCRIL 66
           +A+ A  R E+PVG V V N ++I+   NR  E ++ T HAE+ AI M            
Sbjct: 1   QARQALNRLEVPVGCVIVENGRVIASGSNRTNETRNATRHAEMEAIDMLLPRWECSSHED 60

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
             +     +LYVT EPC MCAAA+SL  I +++YG  N + GG  +    ++     HSP
Sbjct: 61  FSKRFAGCELYVTCEPCIMCAAALSLLGIGKVFYGCKNDRFGGCGSILSLHSN-GVGHSP 119

Query: 127 E--------IYPGISEQRSRQIIQDFFKE 147
           E           GI  + +  + ++F+++
Sbjct: 120 ESAGGMTYPCVGGIMAEEAIGLFREFYEQ 148


>gi|99081767|ref|YP_613921.1| CMP/dCMP deaminase, zinc-binding [Ruegeria sp. TM1040]
 gi|99038047|gb|ABF64659.1| CMP/dCMP deaminase zinc-binding [Ruegeria sp. TM1040]
          Length = 144

 Score =  162 bits (411), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 71/129 (55%), Positives = 88/129 (68%), Gaps = 1/129 (0%)

Query: 22  NEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80
            E+PVGAV V    K+++RAGNR REL D TAHAE+LAIR  C  L  E L   DLYVTL
Sbjct: 15  GEVPVGAVLVSPEGKVVARAGNRTRELNDPTAHAEVLAIRAACAALGSERLLGHDLYVTL 74

Query: 81  EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140
           EPC MCAAAI+ ARI R+YYGAS+PK GG+ +G   +     HH+PE+Y G S  +S  +
Sbjct: 75  EPCAMCAAAIAAARIARVYYGASDPKSGGVAHGACVFDHPQSHHAPEVYEGFSAAQSEAL 134

Query: 141 IQDFFKERR 149
           ++ FF  RR
Sbjct: 135 LRAFFALRR 143


>gi|123968475|ref|YP_001009333.1| putative cytidine/deoxycytidylate deaminase [Prochlorococcus
           marinus str. AS9601]
 gi|123198585|gb|ABM70226.1| putative cytidine/deoxycytidylate deaminase [Prochlorococcus
           marinus str. AS9601]
          Length = 145

 Score =  162 bits (411), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 43/137 (31%), Positives = 68/137 (49%), Gaps = 3/137 (2%)

Query: 16  QNAALRN--EIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILP 72
           + +      E+P+ ++ +    + I R  N     KD   HAEI+A+R    I +     
Sbjct: 6   RRSKEIGKVELPICSIILDERGRCIGRGVNSRNINKDPLGHAEIMALRQASLIKNDWRFN 65

Query: 73  EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGI 132
           E  +   LEPCTMC++A+  AR+ ++ +GA + K GG+          + HH  EI  GI
Sbjct: 66  ECTIITNLEPCTMCSSALIQARMGKVIFGAYDKKRGGLGGSIDLSKHESAHHKMEIIGGI 125

Query: 133 SEQRSRQIIQDFFKERR 149
            E    QI+Q +FK+ R
Sbjct: 126 LEDECSQILQIWFKKLR 142


>gi|163797849|ref|ZP_02191794.1| Cytosine/adenosine deaminase [alpha proteobacterium BAL199]
 gi|159176893|gb|EDP61460.1| Cytosine/adenosine deaminase [alpha proteobacterium BAL199]
          Length = 150

 Score =  162 bits (411), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 68/134 (50%), Positives = 90/134 (67%), Gaps = 2/134 (1%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVL--NNKIISRAGNRNRELKDVTAHAEILAIR 60
            G+ +M+ AL +A++AA   E+PVGAV V   + ++++ AGNR     D TAHAE+LAIR
Sbjct: 2   TGDGYMARALAQAESAASAGEVPVGAVVVHAPSGRVLAEAGNRVETDCDPTAHAEVLAIR 61

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              R L    L + DLYVTLEPC MCA AI+ AR+RRL +GA +PKGGG+E+G +     
Sbjct: 62  AAARALGAPRLVDCDLYVTLEPCAMCAQAIAHARLRRLVFGAYDPKGGGVEHGARVLEQP 121

Query: 121 TCHHSPEIYPGISE 134
           TCHH PEI  G+ E
Sbjct: 122 TCHHRPEIVGGVEE 135


>gi|312621259|ref|YP_004022872.1| cmp/dcmp deaminase zinc-binding protein [Caldicellulosiruptor
           kronotskyensis 2002]
 gi|312201726|gb|ADQ45053.1| CMP/dCMP deaminase zinc-binding protein [Caldicellulosiruptor
           kronotskyensis 2002]
          Length = 143

 Score =  162 bits (410), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 53/142 (37%), Positives = 77/142 (54%), Gaps = 6/142 (4%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M   +E A  +   N+IPV A  V N KIIS    +  + K    HAEILAI      LS
Sbjct: 7   MKTLIEYASRS---NDIPVAAAIVKNGKIISI---KRNDSKKAIYHAEILAIIDATSKLS 60

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
            + L   +++VT EPC MC +AI L++++RLY+GA + K G  E+          +H  E
Sbjct: 61  TKDLRNCEMFVTKEPCPMCMSAIVLSKVKRLYFGARDFKMGAAESCFNLSQNPFLNHKVE 120

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
           +  GI E   R +++ FF+E+R
Sbjct: 121 VIGGICEDECRLLLKRFFEEKR 142


>gi|126311160|ref|XP_001380965.1| PREDICTED: similar to DEADC1 protein [Monodelphis domestica]
          Length = 182

 Score =  162 bits (410), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 43/143 (30%), Positives = 71/143 (49%), Gaps = 8/143 (5%)

Query: 13  EEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS----- 67
            +A+ A    E+PVG + V NNK++++  N   + K+ T HAE++AI             
Sbjct: 22  AQAKEALENGEVPVGCLMVYNNKVLAKGRNEVNQTKNATRHAEMVAIDQVLEWCHRYGKS 81

Query: 68  -QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF--YTLATCHH 124
             E+     LYVT+EPC MCAAA+ L +I  + YG  N + GG  +        L     
Sbjct: 82  PTEVFEHTVLYVTVEPCIMCAAALRLMKIPLVVYGCQNERFGGCGSVLDIASADLPNTGT 141

Query: 125 SPEIYPGISEQRSRQIIQDFFKE 147
             +  PG   + + ++++ F+K+
Sbjct: 142 PFQCIPGYQAEEAVEMLKTFYKQ 164


>gi|206895932|ref|YP_002246819.1| tRNA-specific adenosine deaminase [Coprothermobacter proteolyticus
           DSM 5265]
 gi|206738549|gb|ACI17627.1| tRNA-specific adenosine deaminase [Coprothermobacter proteolyticus
           DSM 5265]
          Length = 154

 Score =  162 bits (410), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 44/161 (27%), Positives = 71/161 (44%), Gaps = 28/161 (17%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRA--------------GNRNRELK 48
               +M  AL+EA  A               N+                    N   +  
Sbjct: 6   DDEKYMVEALKEAVKAY--------------NEGEVPVGVVVVFNGVVVGRGYNLREQSH 51

Query: 49  DVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGG 108
           D TAHAE++A+R     + +  L    +YVTLEPC MC  A+ LAR+ R+ +GA++ K G
Sbjct: 52  DPTAHAEVVALRDAAAHMGRWNLSGATVYVTLEPCLMCCYALVLARVDRVVFGATDQKAG 111

Query: 109 GIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +     F +L   +H  E+  G+ E+   +++  FF++ R
Sbjct: 112 ALVTHMDFLSLPFLNHRFEVRGGVLEKSCSKLLSSFFRKLR 152


>gi|146295406|ref|YP_001179177.1| CMP/dCMP deaminase, zinc-binding [Caldicellulosiruptor
           saccharolyticus DSM 8903]
 gi|145408982|gb|ABP65986.1| tRNA-adenosine deaminase [Caldicellulosiruptor saccharolyticus DSM
           8903]
          Length = 143

 Score =  161 bits (409), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 45/127 (35%), Positives = 72/127 (56%), Gaps = 3/127 (2%)

Query: 23  EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEP 82
           +IP+ A  + + +IIS    +  + K+   HAEILAI      LS + L   ++ VT EP
Sbjct: 19  DIPIAAAVLRDGEIISI---QKNDSKNAIFHAEILAILDAASKLSTKDLRGCEMVVTKEP 75

Query: 83  CTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQ 142
           C MC +AI L++I RLY+GA + K G  E+  +       +H  E+  GI E+  + +++
Sbjct: 76  CPMCMSAIVLSKIDRLYFGARDFKMGAAESCFKLSQDPNLNHKVEVIGGICEEECKALLK 135

Query: 143 DFFKERR 149
            FF++RR
Sbjct: 136 SFFEKRR 142


>gi|321465150|gb|EFX76153.1| hypothetical protein DAPPUDRAFT_306296 [Daphnia pulex]
          Length = 171

 Score =  161 bits (409), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 43/148 (29%), Positives = 69/148 (46%), Gaps = 8/148 (5%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNN-KIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           +M  A E A+ A    E+PVG V  L    II    NR  E K+ T HAE+ AI      
Sbjct: 8   YMDRAFELAREALSVGEVPVGCVLHLEGYGIIGEGRNRVNETKNATRHAELEAIDSALLW 67

Query: 66  L-------SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
           +         ++  + +++V +EPC  CA A+ +    R+YYG SN + GG  +      
Sbjct: 68  IKKNTSESYSQVFGKTEVWVNVEPCIQCAGALQILGFARVYYGCSNERFGGCGSVLDVCE 127

Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFK 146
                   +I  GI    + ++++DF++
Sbjct: 128 KDKRFQRLQIQGGIRANEAIELLKDFYR 155


>gi|308491803|ref|XP_003108092.1| hypothetical protein CRE_10287 [Caenorhabditis remanei]
 gi|308248940|gb|EFO92892.1| hypothetical protein CRE_10287 [Caenorhabditis remanei]
          Length = 171

 Score =  161 bits (409), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 48/149 (32%), Positives = 77/149 (51%), Gaps = 4/149 (2%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
                F+ CA   AQ A   +E+PVG V V++ K I +  NR  E  D T HAE++A+  
Sbjct: 7   DNDRRFLECAFNLAQEALDGDEVPVGCVFVVDGKEIGKGRNRVNETGDPTRHAEMVAVTE 66

Query: 62  GCRILSQE---ILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
             +   +E    L    LYV+LEPC MC++A+    IR++ YGA NP+ GG+ +      
Sbjct: 67  MWKKYGEECKDFLRRAVLYVSLEPCIMCSSAMYQLGIRKMVYGAENPRFGGVRSVGN-AE 125

Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKE 147
                 + +I   +   RS  +++ F+++
Sbjct: 126 KYRMEDNIQIVSNVWSDRSVAMLKSFYEK 154


>gi|254796483|ref|YP_003081319.1| tRNA-specific adenosine deaminase [Neorickettsia risticii str.
           Illinois]
 gi|254589716|gb|ACT69078.1| tRNA-specific adenosine deaminase [Neorickettsia risticii str.
           Illinois]
          Length = 139

 Score =  161 bits (408), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 55/142 (38%), Positives = 80/142 (56%), Gaps = 4/142 (2%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  A+  A+ +    E+PVGAV V    +I+ +GNR     D TAHAE+L IR   + L 
Sbjct: 1   MELAISVARESDC--EVPVGAVLVRQGAVIASSGNRVFRDSDPTAHAEMLVIREAIQRLG 58

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
            + L + +LYVTLEPC MC  A+SL+R+  L + A + K G I NG       T  H P 
Sbjct: 59  VKFLVDFELYVTLEPCPMCMYAMSLSRVGTLCFAAYDEKRGAISNGC--LGTGTYFHVPM 116

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
           +Y G+ E  +++++  FF+  R
Sbjct: 117 VYEGLMEDEAKELLSSFFRILR 138


>gi|186476063|ref|YP_001857533.1| CMP/dCMP deaminase zinc-binding [Burkholderia phymatum STM815]
 gi|184192522|gb|ACC70487.1| CMP/dCMP deaminase zinc-binding [Burkholderia phymatum STM815]
          Length = 213

 Score =  161 bits (408), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 46/122 (37%), Positives = 66/122 (54%)

Query: 24  IPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83
           +PVGAV V  +++I++  N      D +AHAE+ A+R     L    LP  +LYVTLEPC
Sbjct: 61  VPVGAVLVRGDEVIAKGFNHPIGGHDPSAHAEMAALRAAALTLENYRLPGCELYVTLEPC 120

Query: 84  TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQD 143
            MCA AI  ARI R+ YGA +PK G   +    +     +H   +  G+ E+     ++ 
Sbjct: 121 LMCAGAIMHARIARVVYGARDPKTGACGSVVDAFANTQLNHHTTVTGGVLEEECAAALRA 180

Query: 144 FF 145
           FF
Sbjct: 181 FF 182


>gi|256851752|ref|ZP_05557140.1| CMP/dCMP deaminase zinc-binding [Lactobacillus jensenii 27-2-CHN]
 gi|260661531|ref|ZP_05862443.1| CMP/dCMP deaminase zinc-binding [Lactobacillus jensenii 115-3-CHN]
 gi|282933582|ref|ZP_06338952.1| tRNA-specific adenosine deaminase [Lactobacillus jensenii 208-1]
 gi|297205374|ref|ZP_06922770.1| CMP/dCMP deaminase zinc-binding [Lactobacillus jensenii JV-V16]
 gi|256615710|gb|EEU20899.1| CMP/dCMP deaminase zinc-binding [Lactobacillus jensenii 27-2-CHN]
 gi|260547588|gb|EEX23566.1| CMP/dCMP deaminase zinc-binding [Lactobacillus jensenii 115-3-CHN]
 gi|281302325|gb|EFA94557.1| tRNA-specific adenosine deaminase [Lactobacillus jensenii 208-1]
 gi|297149952|gb|EFH30249.1| CMP/dCMP deaminase zinc-binding [Lactobacillus jensenii JV-V16]
          Length = 150

 Score =  161 bits (408), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 40/147 (27%), Positives = 66/147 (44%), Gaps = 4/147 (2%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
               FM  A+E ++ A      P GAV V +N+++    N+     D T HAE   IR  
Sbjct: 2   NDEKFMQEAIELSKKAVEHGNEPFGAVLVKDNEVVFTNENQIFTANDPTFHAETGLIRRF 61

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPK----GGGIENGTQFYT 118
           C       L E  LY + EPC MC+ A+  +++ R+ Y ASN       G   +      
Sbjct: 62  CTSTGITDLSEYTLYTSCEPCFMCSGAMVWSKLGRMVYAASNDDLEMTMGKHGSNCSKIV 121

Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFF 145
               +++P +  G+  + S  +++ +F
Sbjct: 122 FENYNNAPTVTSGVLREESVAVLKAYF 148


>gi|312792797|ref|YP_004025720.1| cmp/dcmp deaminase zinc-binding protein [Caldicellulosiruptor
           kristjanssonii 177R1B]
 gi|312878594|ref|ZP_07738458.1| CMP/dCMP deaminase zinc-binding [Caldicellulosiruptor lactoaceticus
           6A]
 gi|311794629|gb|EFR11094.1| CMP/dCMP deaminase zinc-binding [Caldicellulosiruptor lactoaceticus
           6A]
 gi|312179937|gb|ADQ40107.1| CMP/dCMP deaminase zinc-binding protein [Caldicellulosiruptor
           kristjanssonii 177R1B]
          Length = 143

 Score =  161 bits (408), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 51/142 (35%), Positives = 77/142 (54%), Gaps = 6/142 (4%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M   +E A  +   N+IPV A  V + KI+S    +  + K    HAEILAI      LS
Sbjct: 7   MKTLIEYASRS---NDIPVAAAVVKDGKIVSI---KRNDSKKAIYHAEILAIIDATSKLS 60

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
            + L   +++VT EPC MC +AI L++++RLY+GA + K G  E+          +H  E
Sbjct: 61  TKDLRSCEMFVTKEPCPMCMSAIVLSKVKRLYFGARDFKMGAAESCFNLSQHPFLNHKVE 120

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
           +  GI E   R +++ FF+E+R
Sbjct: 121 VIGGICEDECRLLLKRFFEEKR 142


>gi|190689519|gb|ACE86534.1| adenosine deaminase, tRNA-specific 2, TAD2 homolog (S. cerevisiae)
           protein [synthetic construct]
 gi|190690877|gb|ACE87213.1| adenosine deaminase, tRNA-specific 2, TAD2 homolog (S. cerevisiae)
           protein [synthetic construct]
          Length = 160

 Score =  161 bits (408), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 42/142 (29%), Positives = 69/142 (48%), Gaps = 8/142 (5%)

Query: 14  EAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL------S 67
            A+ A    E+PVG + V NN+++ +  N   + K+ T HAE++AI              
Sbjct: 1   MAKEALENTEVPVGCLMVYNNEVVGKGRNEVNQTKNATRHAEMVAIDQVLDWCRQSGKSP 60

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF--YTLATCHHS 125
            E+     LYVT+EPC MCAAA+ L +I  + YG  N + GG  +        L      
Sbjct: 61  SEVFEHTVLYVTVEPCIMCAAALRLMKIPLVVYGCQNERFGGCGSVLNIASADLPNTGRP 120

Query: 126 PEIYPGISEQRSRQIIQDFFKE 147
            +  PG   + + ++++ F+K+
Sbjct: 121 FQCIPGYRAEEAVEMLKTFYKQ 142


>gi|294674240|ref|YP_003574856.1| guanine deaminase [Prevotella ruminicola 23]
 gi|294472550|gb|ADE81939.1| guanine deaminase [Prevotella ruminicola 23]
          Length = 158

 Score =  161 bits (408), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 39/139 (28%), Positives = 57/139 (41%), Gaps = 3/139 (2%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           ++   FM  A+  A  +  R   P GAV V + +II+ + N      D TAHAE+  IR 
Sbjct: 4   EQDKKFMREAIRLANESVERGGGPFGAVIVKDGEIIAGSSNSVTIDNDPTAHAEVNTIRK 63

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT--- 118
            C  L    L    +Y + EPC MC  AI  ARI +++YG +      I+    F     
Sbjct: 64  ACFKLRTFDLSGCTIYTSCEPCPMCLGAIYWARIGKIFYGNTRKDARDIQFADDFIYEEL 123

Query: 119 LATCHHSPEIYPGISEQRS 137
                        +    +
Sbjct: 124 ERPMDKRTVPIVPLLRDEA 142


>gi|312136100|ref|YP_004003438.1| cmp/dcmp deaminase zinc-binding protein [Caldicellulosiruptor
           owensensis OL]
 gi|311776151|gb|ADQ05638.1| CMP/dCMP deaminase zinc-binding protein [Caldicellulosiruptor
           owensensis OL]
          Length = 143

 Score =  160 bits (407), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 52/142 (36%), Positives = 78/142 (54%), Gaps = 6/142 (4%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M   +E A ++   N+IPV A  V + KIIS    +  + K    HAEILAI      LS
Sbjct: 7   MKTLIEYASHS---NDIPVAAAVVKDGKIISI---KRNDSKKAIYHAEILAIIDATSKLS 60

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
            + L   +++VT EPC MC +AI L++++RLY+GA + K G  E+          +H  E
Sbjct: 61  TKDLRSCEMFVTKEPCPMCMSAIVLSKVKRLYFGARDFKMGAAESCFNLSQHPFLNHKVE 120

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
           +  GI E   R +++ FF+E+R
Sbjct: 121 VIGGICEDECRLLLKRFFEEKR 142


>gi|148828084|ref|YP_001292837.1| hypothetical protein CGSHiGG_08090 [Haemophilus influenzae PittGG]
 gi|148719326|gb|ABR00454.1| hypothetical protein CGSHiGG_08090 [Haemophilus influenzae PittGG]
          Length = 125

 Score =  160 bits (407), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 53/115 (46%), Positives = 66/115 (57%), Gaps = 1/115 (0%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNK-IISRAGNRNRELKDVTAHAEILAIRMG 62
               M  ALE A  A    EIPVGAV V + + II    N +    D TAHAEI+A+R G
Sbjct: 11  DEKMMRYALELADKAEALGEIPVGAVLVDDARNIIGEGWNLSIVQSDPTAHAEIIALRNG 70

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFY 117
            + +    L    LYVTLEPCTMCA AI  +RI+RL +GAS+ K G I +   F+
Sbjct: 71  AKNIQNYRLLNSTLYVTLEPCTMCAGAILHSRIKRLVFGASDYKTGAIGSRFLFF 125


>gi|126696279|ref|YP_001091165.1| putative cytidine/deoxycytidylate deaminase [Prochlorococcus
           marinus str. MIT 9301]
 gi|126543322|gb|ABO17564.1| putative cytidine/deoxycytidylate deaminase [Prochlorococcus
           marinus str. MIT 9301]
          Length = 171

 Score =  160 bits (407), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 46/150 (30%), Positives = 72/150 (48%), Gaps = 6/150 (4%)

Query: 3   KGNVFMSCALEEAQNAALRN--EIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAI 59
           K   +MS  L   + +      E+P+ ++ +    + I R  NR     D   HAEI+A+
Sbjct: 22  KYTKWMSSIL---RRSEEIGKVELPICSIILDERGRCIGRGVNRRNINNDPLGHAEIMAL 78

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
           R    I +     E  +   LEPCTMCA+A+  AR+ ++ +GA + K GG+         
Sbjct: 79  RQASLIKNDWRFNECIIITNLEPCTMCASALIQARMGKVVFGAYDKKRGGLGGSIDLSKH 138

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
            + HH  EI  GI E    + +Q +FK+ R
Sbjct: 139 KSSHHKMEIVGGILEDECCKNLQLWFKKLR 168


>gi|284037689|ref|YP_003387619.1| CMP/dCMP deaminase zinc-binding protein [Spirosoma linguale DSM 74]
 gi|283816982|gb|ADB38820.1| CMP/dCMP deaminase zinc-binding protein [Spirosoma linguale DSM 74]
          Length = 158

 Score =  160 bits (407), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 40/147 (27%), Positives = 63/147 (42%), Gaps = 4/147 (2%)

Query: 2   KKGNVFMSCALEEAQNAALRN-EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
            +  VF+  A++ A+     +   P G+V V + +I+ +  N      D TAHAE++AIR
Sbjct: 3   NQDEVFLREAIQLAREGMTTDQGGPFGSVIVRDGQIVGKGFNMVTSTNDPTAHAEVVAIR 62

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT-- 118
             CR L    L    LY + EPC MC  AI  AR  R+ Y A +     +    QF    
Sbjct: 63  DACRNLGTFQLDGCTLYASCEPCPMCLGAIYWARPSRVVYAAQHADAASVGFDDQFIYEE 122

Query: 119 -LATCHHSPEIYPGISEQRSRQIIQDF 144
                 H       +    +  + +++
Sbjct: 123 IDKPHEHRHIPMHQLLRDEAEAVFKEW 149


>gi|260425752|ref|ZP_05779732.1| cytidine/deoxycytidylate deaminase family protein [Citreicella sp.
           SE45]
 gi|260423692|gb|EEX16942.1| cytidine/deoxycytidylate deaminase family protein [Citreicella sp.
           SE45]
          Length = 149

 Score =  160 bits (406), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 64/117 (54%), Positives = 81/117 (69%)

Query: 33  NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISL 92
           + ++++ AGNR REL D +AHAEILA+R  C     E LP  DLYVTLEPC MCAAAIS 
Sbjct: 33  DGRVVAAAGNRTRELNDPSAHAEILALRAACADAGSERLPGHDLYVTLEPCPMCAAAISF 92

Query: 93  ARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
           AR+ RLYYGA++PK GG+  G + Y    CHH PE+Y GI+   S  +++ FF ERR
Sbjct: 93  ARVARLYYGAADPKSGGVAQGARVYAHPQCHHVPEVYDGIAAAESETLLRGFFAERR 149


>gi|313606255|gb|EFR83242.1| tRNA-specific adenosine deaminase [Listeria monocytogenes FSL
           F2-208]
          Length = 116

 Score =  160 bits (406), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 39/108 (36%), Positives = 63/108 (58%)

Query: 42  NRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
           N     ++   HAE+LAI+  C+  +   L   +LYVTLEPC MC+ AI L+RI ++YYG
Sbjct: 1   NLRETSQNAVTHAELLAIQDACKHQNSWRLSGAELYVTLEPCPMCSGAILLSRIEKVYYG 60

Query: 102 ASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
           A +PK G   +          +H+ E+  G+ E+ S ++++ FF++ R
Sbjct: 61  AKDPKAGTAGSLMNLLQDDRFNHTCEVEAGLMEKESSEMLKSFFQDLR 108


>gi|302872756|ref|YP_003841392.1| CMP/dCMP deaminase zinc-binding [Caldicellulosiruptor obsidiansis
           OB47]
 gi|302575615|gb|ADL43406.1| CMP/dCMP deaminase zinc-binding [Caldicellulosiruptor obsidiansis
           OB47]
          Length = 143

 Score =  160 bits (406), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 52/142 (36%), Positives = 78/142 (54%), Gaps = 6/142 (4%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M   +E A ++   N+IPV A  V + KIIS    +  + K    HAEILAI      LS
Sbjct: 7   MKTLIEYASHS---NDIPVAAAVVKDGKIISI---KRNDSKKAIYHAEILAIIDATSKLS 60

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
            + L   +++VT EPC MC +AI L++++RLY+GA + K G  E+          +H  E
Sbjct: 61  TKDLRSCEMFVTKEPCPMCMSAIVLSKVKRLYFGARDFKMGAAESCFNLSQNPFLNHKVE 120

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
           +  GI E   R +++ FF+E+R
Sbjct: 121 VIGGICEDECRLLLKRFFEEKR 142


>gi|296090277|emb|CBI40096.3| unnamed protein product [Vitis vinifera]
          Length = 205

 Score =  160 bits (405), Expect = 7e-38,   Method: Composition-based stats.
 Identities = 48/159 (30%), Positives = 79/159 (49%), Gaps = 17/159 (10%)

Query: 6   VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
            FM  A+++A+ A    E+PVG V V + K+I+   NR  E ++ T HAE+ AI +    
Sbjct: 29  AFMELAIQQAKLALDSLEVPVGCVIVEDGKLIATGRNRTTETRNATRHAEMEAIDVLLEQ 88

Query: 66  LSQ---------EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116
             +         EI  +  LYVT EPC MCAA++S+  I+ +YYG +N K GG  +    
Sbjct: 89  WQKNGLSKLEVAEIFSKCSLYVTCEPCIMCAASLSILGIKEVYYGCANDKFGGCGSILSL 148

Query: 117 YTLA--------TCHHSPEIYPGISEQRSRQIIQDFFKE 147
           ++ +              +   GI    +  ++Q F+++
Sbjct: 149 HSSSSKLLTSGTPLVKGFKCTGGIMATEAVSLLQRFYEQ 187


>gi|158318268|ref|YP_001510776.1| CMP/dCMP deaminase zinc-binding [Frankia sp. EAN1pec]
 gi|158113673|gb|ABW15870.1| CMP/dCMP deaminase zinc-binding [Frankia sp. EAN1pec]
          Length = 185

 Score =  159 bits (404), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 41/111 (36%), Positives = 56/111 (50%)

Query: 37  ISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIR 96
           + R  N      D TAHAE++A+R     L    L    L VTLEPCTMCA A+ LAR+ 
Sbjct: 60  LGRGHNAREAAGDPTAHAEVVALRQAAARLGSWRLTGATLVVTLEPCTMCAGALVLARVD 119

Query: 97  RLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
           RL YGA + K G + +          +H PE+  G+  Q   + +  FF +
Sbjct: 120 RLVYGAVDDKAGAVGSLWDVVRDRRLNHRPEVVAGVRGQECSEQLAAFFAD 170


>gi|326502722|dbj|BAJ98989.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 169

 Score =  159 bits (404), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 45/152 (29%), Positives = 70/152 (46%), Gaps = 19/152 (12%)

Query: 15  AQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQ------ 68
           A+ A    E+PVG V V N K+I+   NR    ++ T HAE+ AI +  +          
Sbjct: 1   AKFALDNLEVPVGCVIVENGKVIASGSNRTNATRNATRHAEMEAIDVLLQEWQSIGLDQT 60

Query: 69  ---EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT------- 118
              E     DLYVT EPC MCA+A+S+  IR +Y+G  N K GG  +    +        
Sbjct: 61  LVAEKFAGCDLYVTCEPCIMCASALSILGIREVYFGCPNDKFGGCGSVMSLHESLLSDDL 120

Query: 119 ---LATCHHSPEIYPGISEQRSRQIIQDFFKE 147
                T     +   GI  + +  + ++F+++
Sbjct: 121 TGSQDTRSRGFKCTGGIMAEEAVALFRNFYEQ 152


>gi|281351029|gb|EFB26613.1| hypothetical protein PANDA_000408 [Ailuropoda melanoleuca]
          Length = 158

 Score =  159 bits (404), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 42/141 (29%), Positives = 69/141 (48%), Gaps = 8/141 (5%)

Query: 15  AQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS------Q 68
           A+ A    E+PVG + V NN+++ +  N   + K+ T HAE++AI               
Sbjct: 1   AKEALENIEVPVGCLMVYNNEVVGKGRNEVNQTKNATRHAEMVAIDQALDWCHRSGKSPS 60

Query: 69  EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF--YTLATCHHSP 126
           E+     LYVT+EPC MCAAA+ L +I  + YG  N + GG  +        L       
Sbjct: 61  EVFEHTVLYVTVEPCIMCAAALRLMKIPLVVYGCQNERFGGCGSVLNIASADLPNTGRPF 120

Query: 127 EIYPGISEQRSRQIIQDFFKE 147
           +  PG   + + ++++ F+K+
Sbjct: 121 KCIPGYRAEEAVEMLKTFYKQ 141


>gi|237831707|ref|XP_002365151.1| tRNA-specific adenosine deaminase, putative [Toxoplasma gondii
           ME49]
 gi|211962815|gb|EEA98010.1| tRNA-specific adenosine deaminase, putative [Toxoplasma gondii
           ME49]
 gi|221487001|gb|EEE25247.1| tRNA-specific adenosine deaminase, putative [Toxoplasma gondii GT1]
 gi|221506684|gb|EEE32301.1| tRNA-specific adenosine deaminase, putative [Toxoplasma gondii VEG]
          Length = 178

 Score =  159 bits (404), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 49/157 (31%), Positives = 77/157 (49%), Gaps = 12/157 (7%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAIR 60
              +FMS ALEEA+ A    E+PVG V V     +++SR  N     K+ T H E+ A+ 
Sbjct: 8   DKRLFMSAALEEARLALKEGEVPVGCVLVDSKTRQVVSRGRNATNRTKNATRHCELEALD 67

Query: 61  MGCRILSQE---------ILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIE 111
               +L             L  +DL+VT EPC MCA A+  + ++R++YG  N + GG  
Sbjct: 68  AYMALLPPPNIGGVEPRVDLSSIDLFVTCEPCVMCAVALQCSGVKRVFYGCGNDRFGGCG 127

Query: 112 NGTQFY-TLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
           +   F+  L+      E Y GI  + +  +++ F+  
Sbjct: 128 SVLSFHKRLSEQWKGLECYSGIFREEAIDLLRSFYSR 164


>gi|242018582|ref|XP_002429753.1| tRNA-specific adenosine deaminase subunit TAD2, putative [Pediculus
           humanus corporis]
 gi|212514765|gb|EEB17015.1| tRNA-specific adenosine deaminase subunit TAD2, putative [Pediculus
           humanus corporis]
          Length = 188

 Score =  159 bits (404), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 44/146 (30%), Positives = 76/146 (52%), Gaps = 7/146 (4%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  AL  A+NA   NE+PVG + V +N+II+   N   E K+ T HAE+  I       
Sbjct: 16  WMKIALGFAENALKNNEVPVGCIFVYDNEIIANGANTVNETKNATRHAEMNCIDTVLSWC 75

Query: 67  SQEILPEVDLY------VTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
            +  L   +++      VT+EPC MC+AA+   +++R+ YG  N + GG         + 
Sbjct: 76  KERNLNFTEVFKAMDVVVTVEPCIMCSAALFELKVKRITYGCKNYRFGGCSTVFDISKIY 135

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFK 146
             + +  +  G+ ++ S  +++DF+K
Sbjct: 136 R-NSNCVMVGGVYDEESINLLKDFYK 160


>gi|198426798|ref|XP_002125101.1| PREDICTED: similar to deaminase domain containing 1 [Ciona
           intestinalis]
          Length = 178

 Score =  159 bits (404), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 43/168 (25%), Positives = 74/168 (44%), Gaps = 21/168 (12%)

Query: 1   MKKG--NVFMSCALEEAQNAALRNEIPVGAVAVLNNKI-ISRAGNRNRELKDVTAHAEIL 57
           M       +M+ A   A++A    E+PVG V V  NK  +S   N+  E K+ T HAE++
Sbjct: 1   MNSDVLLKWMNEAFNYAEDALKEGEVPVGCVLVYKNKEKLSNGRNKVNETKNATRHAELV 60

Query: 58  AIRMGCR--------------ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
           AI    +                  ++     +YVT+EPC MC  A+   +I  + +G +
Sbjct: 61  AIDNAIKTVTSDSWKQSLPNDWKFTDVFEHCVMYVTVEPCIMCCGAMRAMKIPLVVFGCN 120

Query: 104 NPKGGGIENGTQFYTLATCH----HSPEIYPGISEQRSRQIIQDFFKE 147
           N + GG  +    ++    +         Y G    R+  +++DF+K+
Sbjct: 121 NERFGGCGSVLSLHSNRKLNSSLGPVISTYGGQQTVRAITLLKDFYKQ 168


>gi|327356422|gb|EGE85279.1| tRNA specific adenosine deaminase [Ajellomyces dermatitidis ATCC
           18188]
          Length = 174

 Score =  159 bits (404), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 42/135 (31%), Positives = 70/135 (51%)

Query: 13  EEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILP 72
           E+ + A    E PVG V V N+++I    N   +  + T HAE LAI    R   + I  
Sbjct: 3   EKGEEALASGETPVGCVLVHNDEVIGSGMNDTNKSMNGTRHAEFLAIEEVLRSHPRSIFR 62

Query: 73  EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGI 132
           E DLYVT+EPC MCA+A+   +IR +Y+G +N + GG     + ++         +  G+
Sbjct: 63  ETDLYVTVEPCIMCASALRQYQIRHVYFGCANERFGGTGGVLKLHSDPGIDPPYGLTGGL 122

Query: 133 SEQRSRQIIQDFFKE 147
             + +  +++ F+ +
Sbjct: 123 FRKEAIMLLRRFYIQ 137


>gi|296114354|ref|ZP_06833008.1| CMP/dCMP deaminase [Gluconacetobacter hansenii ATCC 23769]
 gi|295979115|gb|EFG85839.1| CMP/dCMP deaminase [Gluconacetobacter hansenii ATCC 23769]
          Length = 173

 Score =  159 bits (403), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 51/117 (43%), Positives = 76/117 (64%)

Query: 33  NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISL 92
           +  I+S AGNR+ E  D +AHAE+LA+R   RI   + L +  LYVTLEPC MCA A   
Sbjct: 55  DGAILSCAGNRSEEWHDPSAHAEMLALREATRIRGGQRLSDCALYVTLEPCPMCAGAAVH 114

Query: 93  ARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
            RI R+ +GA +PKGGG+++G + +    C H PE+  G+ E+ ++ +++ FF+ RR
Sbjct: 115 FRIGRILFGAYDPKGGGVDHGPRLFARPGCLHRPEVIGGLREREAQDMLRAFFRNRR 171


>gi|325117380|emb|CBZ52932.1| Cytidine and deoxycytidylate deaminase family protein, related
           [Neospora caninum Liverpool]
          Length = 348

 Score =  159 bits (403), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 46/157 (29%), Positives = 77/157 (49%), Gaps = 12/157 (7%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAIR 60
              +FMS ALEEA++A    E+PVG V V     +++++  N     K+ T H E+ A+ 
Sbjct: 178 DKRLFMSAALEEARSALQEGEVPVGCVLVDSRTRQVVAKGRNATNRTKNATRHCELEALD 237

Query: 61  MGCRILSQEILPEV---------DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIE 111
                     + +          DL+VT EPC MCA A+  + I+R++YG  N + GG  
Sbjct: 238 AYMARFPPTRIGDSEAPVDMSSIDLFVTCEPCVMCAVALQCSGIKRVFYGCGNDRFGGCG 297

Query: 112 NGTQFYTLATCHHS-PEIYPGISEQRSRQIIQDFFKE 147
           +   F+   + H +  E  PGI  + +  +++ F+  
Sbjct: 298 SVLSFHKKLSAHWTGLECCPGIFREEAIDLLRSFYSR 334


>gi|17554608|ref|NP_498663.1| hypothetical protein R13A5.10 [Caenorhabditis elegans]
 gi|15144367|gb|AAK84461.1|AC006679_2 Hypothetical protein R13A5.10 [Caenorhabditis elegans]
          Length = 153

 Score =  159 bits (403), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 40/120 (33%), Positives = 57/120 (47%), Gaps = 1/120 (0%)

Query: 7   FMSCALEEAQNAALRNEI-PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           FM  A+EEA+    + +  P GAV V + K+I    N     KD TAHAE+ AIR  C+ 
Sbjct: 3   FMKLAIEEAKKGMEKGDGGPFGAVIVKDGKVIGSGHNMVLVTKDPTAHAEVTAIRNTCKN 62

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           +    L    LY +  PC MC  A   +R+  +YYGA++     I  G   +     +  
Sbjct: 63  VDNFDLSGCQLYTSCYPCPMCMGAALWSRVDAIYYGATSQDAANIGFGDHEFHEFLQNPK 122


>gi|303277403|ref|XP_003057995.1| cytidine/deoxycytidylate deaminase family protein [Micromonas
           pusilla CCMP1545]
 gi|226460652|gb|EEH57946.1| cytidine/deoxycytidylate deaminase family protein [Micromonas
           pusilla CCMP1545]
          Length = 201

 Score =  159 bits (403), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 55/177 (31%), Positives = 78/177 (44%), Gaps = 35/177 (19%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVL--NNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           MS A+EEA+ A+ R E+PVGAV V     ++++   N   E  D TAHAE+  IR G + 
Sbjct: 1   MSLAIEEAKLASRRLEVPVGAVLVRASTGEVLASHHNTVDEEDDPTAHAELKCIRDGAKR 60

Query: 66  LSQEI-LPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF-------- 116
           L     L E  LYVTLEPC MCA A+  AR+  + +GA NP  GG  +            
Sbjct: 61  LGGWRYLAETTLYVTLEPCPMCAGAVLNARLGEVVWGAPNPLIGGDGSWLPIMGDGGGAD 120

Query: 117 ------------------------YTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
                                           +  +   + E+    +++ FF+ERR
Sbjct: 121 VAEADVDEPEDAVRSCSIPGGGGPVRPHAFKPTLVVRRRVLEEECAALMRSFFRERR 177


>gi|308474568|ref|XP_003099505.1| hypothetical protein CRE_01142 [Caenorhabditis remanei]
 gi|308266694|gb|EFP10647.1| hypothetical protein CRE_01142 [Caenorhabditis remanei]
          Length = 153

 Score =  158 bits (402), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 41/120 (34%), Positives = 56/120 (46%), Gaps = 5/120 (4%)

Query: 7   FMSCALEEAQNAALRNEI-PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           FM  A+EEA+    + +  P GAV V + K+I    N     KD TAHAE+ AIR  C+ 
Sbjct: 3   FMKLAIEEAKKGMAKGDGGPFGAVIVKDGKVIGVGHNMVLVNKDPTAHAEVTAIRDACKN 62

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGT----QFYTLAT 121
           +    L    LY +  PC MC  A   +R+  +YYGA++     I  G      F     
Sbjct: 63  VDNFDLSGCQLYTSCYPCPMCMGAALWSRVDAVYYGATSEDAASIGFGDHEFHDFLKDPK 122


>gi|152992774|ref|YP_001358495.1| cytidine/deoxycytidylate deaminase family protein [Sulfurovum sp.
           NBC37-1]
 gi|151424635|dbj|BAF72138.1| cytidine/deoxycytidylate deaminase family protein [Sulfurovum sp.
           NBC37-1]
          Length = 153

 Score =  158 bits (402), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 43/146 (29%), Positives = 63/146 (43%), Gaps = 3/146 (2%)

Query: 5   NVFMSCALEEAQNAALRNEI-PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
           + FM  A  EA+      +  P GAV V + KII+   N   +  D TAHAE++AIR   
Sbjct: 2   DPFMREAFLEAKRGIEAGDGGPFGAVIVKDGKIIASGHNEVVKTNDPTAHAEMIAIRNAS 61

Query: 64  RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123
             L    L    LYVT EPC MC +AI  A I R+YY  +      I       T     
Sbjct: 62  AKLQNFKLEGCTLYVTGEPCPMCFSAIHWAHIERVYYCNTKEDAARIGFDDSLITEIILG 121

Query: 124 HSPEIYP--GISEQRSRQIIQDFFKE 147
              +         ++ + +   ++++
Sbjct: 122 KKKDPVSFMHTPHEQCQTLFSVWYED 147


>gi|78212739|ref|YP_381518.1| tRNA-adenosine deaminase [Synechococcus sp. CC9605]
 gi|78197198|gb|ABB34963.1| cytidine/deoxycytidylate deaminase family protein [Synechococcus
           sp. CC9605]
          Length = 174

 Score =  158 bits (402), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 42/137 (30%), Positives = 69/137 (50%), Gaps = 1/137 (0%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           +M   L+ A+   L  E+PV AV +    + I    NR    +D   HAE++A++    +
Sbjct: 27  WMDVLLQRAEGVGLEGEVPVAAVILDGQGRAIGHGRNRRENNRDPLGHAELVALQQAAIV 86

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
            +        L VTLEPC MCA A+  AR+  + + AS+PK GG+       T A+ HH 
Sbjct: 87  QNDWRFNNCTLIVTLEPCPMCAGALVQARMGTVVFAASDPKRGGLGGSLDLSTHASAHHH 146

Query: 126 PEIYPGISEQRSRQIIQ 142
            ++   + E  +R+ ++
Sbjct: 147 MKVIQSVREPEAREQLE 163


>gi|225013101|ref|ZP_03703515.1| CMP/dCMP deaminase zinc-binding [Flavobacteria bacterium MS024-2A]
 gi|225002759|gb|EEG40741.1| CMP/dCMP deaminase zinc-binding [Flavobacteria bacterium MS024-2A]
          Length = 154

 Score =  158 bits (402), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 56/150 (37%), Positives = 82/150 (54%), Gaps = 7/150 (4%)

Query: 1   MK-KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
           M+     FM  AL EA+ AA  +E+PVGAV V+  +II+RA N    L DVTAHAE+ AI
Sbjct: 10  MELDDQYFMKQALAEAEKAAFADEVPVGAVVVVEQRIIARAHNLTERLHDVTAHAEMQAI 69

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
                 L+ + L    LYVTLEPC MCA A+  ++  R+ +GAS+ K G  +        
Sbjct: 70  TAAANYLNGKYLVGCTLYVTLEPCVMCAGALVWSQFDRVVFGASDSKRGFQQANLDL--- 126

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
              H    +  G+  + ++ ++  FF ++R
Sbjct: 127 ---HPKTILSGGVLAEEAKALLDAFFAKKR 153


>gi|227506029|ref|ZP_03936078.1| nucleoside deaminase [Corynebacterium striatum ATCC 6940]
 gi|227197311|gb|EEI77359.1| nucleoside deaminase [Corynebacterium striatum ATCC 6940]
          Length = 156

 Score =  158 bits (402), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 49/140 (35%), Positives = 65/140 (46%), Gaps = 3/140 (2%)

Query: 12  LEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQ-E 69
           LE A+      +IPVGAV        +S   NR  +  D TAHAE+ AIR          
Sbjct: 18  LEVARQTPA-GDIPVGAVLYDAAGNELSTGVNRREQRGDPTAHAEVEAIRAAVAKHGNGW 76

Query: 70  ILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIY 129
            L   ++ VTLEPC MCA AI  AR+  + +GA  PK G   +           H PE+ 
Sbjct: 77  RLEGCEIVVTLEPCAMCAGAIQGARVASVVFGAFEPKTGACGSLVDVLRAPGSLHVPEVR 136

Query: 130 PGISEQRSRQIIQDFFKERR 149
            G+ E+    ++  FF E R
Sbjct: 137 AGVCEEECAGLLTGFFGELR 156


>gi|302559794|ref|ZP_07312136.1| cytidine and deoxycytidylate deaminase [Streptomyces griseoflavus
           Tu4000]
 gi|302477412|gb|EFL40505.1| cytidine and deoxycytidylate deaminase [Streptomyces griseoflavus
           Tu4000]
          Length = 107

 Score =  158 bits (402), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 40/107 (37%), Positives = 57/107 (53%)

Query: 42  NRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
           N      D TAHAE+LA+R     L +  L    L VTLEPCTMCA AI  +R+ R+ YG
Sbjct: 1   NEREAAGDPTAHAEVLALRRAAAELGEWRLAGCTLVVTLEPCTMCAGAIQQSRVDRVVYG 60

Query: 102 ASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKER 148
           A + K G   +          +H PE+  G+  +   +++ +FF+ER
Sbjct: 61  ARDEKAGAAGSLWDLVRDRRLNHRPEVIEGVLSEECARLLTEFFRER 107


>gi|295687633|ref|YP_003591326.1| CMP/dCMP deaminase zinc-binding protein [Caulobacter segnis ATCC
           21756]
 gi|295429536|gb|ADG08708.1| CMP/dCMP deaminase zinc-binding protein [Caulobacter segnis ATCC
           21756]
          Length = 148

 Score =  158 bits (402), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 56/130 (43%), Positives = 79/130 (60%), Gaps = 2/130 (1%)

Query: 22  NEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVT 79
            E PVGAV +     ++++ AGN      D TAHAEI A+R     L    L ++ L VT
Sbjct: 15  GETPVGAVILDPKTGEVLAVAGNGPIAAHDPTAHAEIAAMRAAAAKLENYRLTDLTLVVT 74

Query: 80  LEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139
           LEPC MCA AIS ARI R+ +GA +PKGG + +G +F+   TCH  PE+  G+  + S +
Sbjct: 75  LEPCAMCAGAISHARIGRVVFGAEDPKGGAVVHGPKFFAQPTCHWRPEVTGGVLAEESAE 134

Query: 140 IIQDFFKERR 149
           +++ FF+ RR
Sbjct: 135 LLRGFFRARR 144


>gi|111220122|ref|YP_710916.1| tRNA-specific adenosine deaminase [Frankia alni ACN14a]
 gi|111147654|emb|CAJ59309.1| tRNA-specific adenosine deaminase [Frankia alni ACN14a]
          Length = 163

 Score =  158 bits (401), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 47/156 (30%), Positives = 66/156 (42%), Gaps = 15/156 (9%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVL--------NNKIISRAGNRNRELKDVTAH 53
                 M  AL +A+ A    ++                   ++    N      D TAH
Sbjct: 10  SDHEAAMGLALAQARLAPEHGDV-------PVGAVVVGPEGTVLGAGRNTRERDGDPTAH 62

Query: 54  AEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENG 113
           AE+LA+R     +    L    L VTLEPCTMCA A+ LAR+ RL YGA + K G + + 
Sbjct: 63  AEVLALRAAAARVGSWRLSGATLVVTLEPCTMCAGALVLARVDRLVYGAVDDKAGAVGSL 122

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
                    +H PE+  G+       ++ DFF  RR
Sbjct: 123 WDVVRDRRLNHRPEVISGVRAAECATLLADFFTARR 158


>gi|255628537|gb|ACU14613.1| unknown [Glycine max]
          Length = 182

 Score =  158 bits (400), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 47/159 (29%), Positives = 76/159 (47%), Gaps = 17/159 (10%)

Query: 6   VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
            FM  A+++A+ A    E+PVG V   + K+I+   NR  E ++ T HAE+ AI +    
Sbjct: 8   AFMELAIQQARLALDVLEVPVGCVIAEDGKVIASGRNRTTETRNATRHAEMEAIDVLLGQ 67

Query: 66  LSQ---------EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116
             +         E      LYVT EPC MCA+A+S+  I+ ++YG SN K GG  +    
Sbjct: 68  WQKHGLSMSEVAEKFSNCSLYVTCEPCIMCASALSILGIKEVFYGCSNDKFGGCGSILSL 127

Query: 117 YTLATCHHSPEIYPG--------ISEQRSRQIIQDFFKE 147
           +   T   + E+  G        I    +  + + F+++
Sbjct: 128 HLSNTAPLNNEVPSGKCFKCTGRIMASEAVLLFRTFYEQ 166


>gi|227496672|ref|ZP_03926948.1| cytosine deaminase [Actinomyces urogenitalis DSM 15434]
 gi|226833820|gb|EEH66203.1| cytosine deaminase [Actinomyces urogenitalis DSM 15434]
          Length = 154

 Score =  158 bits (400), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 49/128 (38%), Positives = 68/128 (53%), Gaps = 1/128 (0%)

Query: 23  EIPVGAVAVLNN-KIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81
           E+PVGAV +    ++I+ A N      D TAHAE+ A+R     L+   L    L VTLE
Sbjct: 27  EVPVGAVVLDPGGRVIAEAANARETEHDPTAHAEVRALRAAGARLADSHLDGCTLVVTLE 86

Query: 82  PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141
           PCTMCA AI LAR++R+  GA  PK G   +          +H  E+  G+    S  ++
Sbjct: 87  PCTMCAGAIQLARLQRVVLGAWEPKTGACGSVRDVLRDPRANHQVEVVAGVGASESEALL 146

Query: 142 QDFFKERR 149
           ++FF  RR
Sbjct: 147 REFFARRR 154


>gi|251798037|ref|YP_003012768.1| CMP/dCMP deaminase zinc-binding [Paenibacillus sp. JDR-2]
 gi|247545663|gb|ACT02682.1| CMP/dCMP deaminase zinc-binding [Paenibacillus sp. JDR-2]
          Length = 155

 Score =  158 bits (400), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 45/149 (30%), Positives = 67/149 (44%), Gaps = 4/149 (2%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M +  +FM  A++ ++ A      P GAV V N +I+    N+     D T HAE   +R
Sbjct: 1   MNQDEIFMREAIKLSKLAVEHGNEPFGAVLVKNGEIVYSNENQIYSATDPTFHAEAGLLR 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGG----GIENGTQF 116
             C       L E  LY + EPC MC+ A+   R+ RL Y AS+           +    
Sbjct: 61  RFCAETHITDLREYTLYSSCEPCFMCSGAMVWTRLGRLVYAASDMDLCNLLDAKGSPCSG 120

Query: 117 YTLATCHHSPEIYPGISEQRSRQIIQDFF 145
                 HH PE+  GI ++ S  ++ D+F
Sbjct: 121 IVFKHSHHKPEVLGGILKEESLSVLADYF 149


>gi|124009723|ref|ZP_01694394.1| guanine deaminase [Microscilla marina ATCC 23134]
 gi|123984327|gb|EAY24671.1| guanine deaminase [Microscilla marina ATCC 23134]
          Length = 158

 Score =  158 bits (400), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 41/120 (34%), Positives = 59/120 (49%), Gaps = 1/120 (0%)

Query: 2   KKGNVFMSCALEEAQNAALRN-EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +    F++ A+E A      N   P GAV V N +II+   NR    +D TAHAE++AIR
Sbjct: 3   ENHERFINRAIELATQGMDSNSGGPFGAVVVKNGEIIAEGHNRVTSTQDPTAHAEVVAIR 62

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
             C++L+   L +  +Y + EPC MC  AI  AR + +YY  +      I    Q     
Sbjct: 63  EACKVLNTFQLDDCVIYTSCEPCPMCLGAIYWARPKAVYYACNREDAAHIGFDDQLIYDE 122


>gi|325287796|ref|YP_004263586.1| Guanine deaminase [Cellulophaga lytica DSM 7489]
 gi|324323250|gb|ADY30715.1| Guanine deaminase [Cellulophaga lytica DSM 7489]
          Length = 156

 Score =  157 bits (399), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 42/115 (36%), Positives = 56/115 (48%), Gaps = 1/115 (0%)

Query: 3   KGNVFMSCALEEAQNAALRNEI-PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
             + FM  A+  A      NE  P G V V + KII +  N+     D TAHAE+ AIR 
Sbjct: 2   SDDKFMQEAVNAALKGMQNNEGGPFGCVIVKDGKIIGKGNNKVTSTNDPTAHAEVTAIRD 61

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116
            C+ L+   L    +Y + EPC MC  AI  AR  ++YYG+S      I    +F
Sbjct: 62  ACKNLNSFQLDGCIIYTSCEPCPMCLGAIYWARPEKVYYGSSQADAANIGFDDEF 116


>gi|33240486|ref|NP_875428.1| cytosine/adenosine deaminase [Prochlorococcus marinus subsp.
           marinus str. CCMP1375]
 gi|33238014|gb|AAQ00081.1| Cytosine/adenosine deaminase [Prochlorococcus marinus subsp.
           marinus str. CCMP1375]
          Length = 164

 Score =  157 bits (398), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 42/146 (28%), Positives = 70/146 (47%), Gaps = 1/146 (0%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGC 63
           + +M    + A+      E+P+ A+ +      I    N   +  D   HAE++A+R   
Sbjct: 15  HRWMMILRKRAKIVGKEGEVPITAIILNEKGHCIGHGRNTRNKRFDPMGHAELVALRQAA 74

Query: 64  RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123
            +       E  L VTLEPC MCA A+  AR+ R+ +GA + K GG+       T  + H
Sbjct: 75  WLKGDWRFNECTLIVTLEPCQMCAGALIQARMGRVIFGAYDFKRGGLGGTLDLSTHKSAH 134

Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149
           H   +  G+ ++  +Q I+++F  RR
Sbjct: 135 HKMIVKGGVMKKEIKQEIEEWFSLRR 160


>gi|21355527|ref|NP_650610.1| CG5292 [Drosophila melanogaster]
 gi|7300237|gb|AAF55401.1| CG5292 [Drosophila melanogaster]
 gi|18447473|gb|AAL68299.1| RE41712p [Drosophila melanogaster]
 gi|220948458|gb|ACL86772.1| CG5292-PA [synthetic construct]
 gi|220960450|gb|ACL92761.1| CG5292-PA [synthetic construct]
          Length = 160

 Score =  157 bits (398), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 48/147 (32%), Positives = 73/147 (49%), Gaps = 9/147 (6%)

Query: 6   VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
            FM  AL EA+ A    E+PVG V V  +K+++R GN     ++ T HAE + I      
Sbjct: 3   AFMEEALVEARRARDAGEVPVGCVFVHGDKVVARGGNEVNVHRNATRHAEFICIDAILAS 62

Query: 66  LSQEILP------EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
             +  LP      E+ + VT+EPC MC+AA+    ++ + YG  N + GG    T     
Sbjct: 63  CRERRLPARQLFSEITVVVTVEPCIMCSAALHTLGVKEIIYGCENDRFGG---KTVVDVA 119

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFK 146
           A   H  EI  G+    +  +++DF+K
Sbjct: 120 AVVGHRIEITGGVRADEAMALLKDFYK 146


>gi|195349159|ref|XP_002041114.1| GM15219 [Drosophila sechellia]
 gi|194122719|gb|EDW44762.1| GM15219 [Drosophila sechellia]
          Length = 160

 Score =  157 bits (398), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 47/147 (31%), Positives = 73/147 (49%), Gaps = 9/147 (6%)

Query: 6   VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
            FM  AL EA+ A    E+PVG V V   K+++R GN     ++ T HAE + I      
Sbjct: 3   AFMEEALVEARRARDAGEVPVGCVFVHGGKVVARGGNEVNVHRNATRHAEFICIDAILAT 62

Query: 66  LSQEILP------EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
             ++ LP      E+ + VT+EPC MC+AA+    ++ + YG  N + GG    T     
Sbjct: 63  CREKRLPARQLFSEITVVVTVEPCIMCSAALHTLGVKEIIYGCENDRFGG---KTVVDVA 119

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFK 146
           A   H  EI  G+    +  ++++F+K
Sbjct: 120 AVVGHRIEITGGVRADEAMALLKEFYK 146


>gi|310657385|ref|YP_003935106.1| guanine deaminase [Clostridium sticklandii DSM 519]
 gi|308824163|emb|CBH20201.1| guanine deaminase [Clostridium sticklandii]
          Length = 154

 Score =  157 bits (398), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 48/145 (33%), Positives = 72/145 (49%), Gaps = 6/145 (4%)

Query: 5   NVFMSCALEEAQNA-ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
           + FM  A++EA     LR   P GAV V +NK+I+R  N+  E  D TAHAEI+AIR   
Sbjct: 2   DEFMKEAIKEAFEGIGLRAGGPFGAVIVKDNKVIARGHNKVIETNDPTAHAEIVAIREAT 61

Query: 64  RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN----GTQFYTL 119
           ++L +  L +  LY T EPC MC +A   A+I  +YYGA+      I        +    
Sbjct: 62  KLLGRFDLSDCILYTTCEPCPMCYSAAHWAKIPLIYYGATQDDAKDIGFDDSYIYEVLQN 121

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDF 144
              +   +I   I  ++  +  + +
Sbjct: 122 KHSNEKMKICQ-IDREQCLEPFRKY 145


>gi|110679276|ref|YP_682283.1| cytidine and deoxycytidylate deaminase family protein [Roseobacter
           denitrificans OCh 114]
 gi|109455392|gb|ABG31597.1| cytidine and deoxycytidylate deaminase family protein [Roseobacter
           denitrificans OCh 114]
          Length = 155

 Score =  157 bits (398), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 71/131 (54%), Positives = 89/131 (67%), Gaps = 1/131 (0%)

Query: 20  LRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYV 78
            R E+PVGAV V  +  II+ AGN+ R   D TAHAEILAIR  C +L  E L +  LYV
Sbjct: 25  KRGEVPVGAVIVAPDGAIIAAAGNQTRADHDPTAHAEILAIRRACAVLGSERLLDHALYV 84

Query: 79  TLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSR 138
           TLEPC MCAAAIS ARI RLYYGAS+PK GG+  G + ++   CHH+PE++ GI+   S 
Sbjct: 85  TLEPCAMCAAAISAARISRLYYGASDPKSGGVAQGARVFSHPQCHHAPEVFDGIAAAESE 144

Query: 139 QIIQDFFKERR 149
            +++ FF  RR
Sbjct: 145 AMLRGFFTARR 155


>gi|226226900|ref|YP_002761006.1| putative deaminase [Gemmatimonas aurantiaca T-27]
 gi|226090091|dbj|BAH38536.1| putative deaminase [Gemmatimonas aurantiaca T-27]
          Length = 144

 Score =  157 bits (398), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 58/128 (45%), Positives = 72/128 (56%), Gaps = 2/128 (1%)

Query: 24  IPVGAVAVLN--NKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81
           +PVGAV +     +II RA NR R   D TAHAE+LA+R   RI     L E  L VTLE
Sbjct: 17  VPVGAVVMRTETGEIIVRAQNRMRRDGDATAHAEVLALREAARIAGDARLGEFTLVVTLE 76

Query: 82  PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141
           PC MCA AI LARI  L +GA + K G   +       A  +H P +  G+ E  +R ++
Sbjct: 77  PCAMCAGAIVLARIGALAFGAWDEKAGMCGSVGDIVRHARLNHRPAVQGGVLESENRALL 136

Query: 142 QDFFKERR 149
           Q FF ERR
Sbjct: 137 QQFFAERR 144


>gi|319760657|ref|YP_004124595.1| tRNA-specific adenosine deaminase [Candidatus Blochmannia vafer
           str. BVAF]
 gi|318039371|gb|ADV33921.1| tRNA-specific adenosine deaminase [Candidatus Blochmannia vafer
           str. BVAF]
          Length = 155

 Score =  157 bits (398), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 53/148 (35%), Positives = 74/148 (50%), Gaps = 2/148 (1%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
             ++M  A+  A  AAL   + +GAV V + +++    N      D +AHAEI+A+R+G 
Sbjct: 8   DIIWMRYAITLASVAALSGNVAIGAVLVYDGRLVGYGYNAALIFHDPSAHAEIIALRVGG 67

Query: 64  RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQ--FYTLAT 121
             L    L    LYVT+EPC MC  AI  ARI RL  GA   K   I       F   A 
Sbjct: 68  NYLGNYRLLNTTLYVTMEPCIMCVGAIINARIHRLVCGAIGNKIRWINLLRINYFIDHAM 127

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +H  +I  G+  +   + I+DFFK +R
Sbjct: 128 INHQCDIKTGVLSEVCSKQIRDFFKYKR 155


>gi|307209295|gb|EFN86380.1| tRNA-specific adenosine deaminase 2 [Harpegnathos saltator]
          Length = 175

 Score =  157 bits (398), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 40/147 (27%), Positives = 71/147 (48%), Gaps = 8/147 (5%)

Query: 6   VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
            +M  AL++A+ +    E+PVG + V NN+ I+   N   E  + T HAEI  I    R 
Sbjct: 5   AWMDAALQKAEESLREGEVPVGCLFVYNNEAIATGNNTVNETCNATRHAEINCIDQVLRF 64

Query: 66  LSQEILPEVDLY------VTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
             ++ L    ++      VT+EPC MC +A+   R+R + YG +N + GG  +  +    
Sbjct: 65  CKEKQLEHETVFRNLDVIVTVEPCIMCVSALLQLRVRSIVYGCANDRFGGCTSVLEVPNF 124

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFK 146
                   I   +    + +++++F+K
Sbjct: 125 YD--PKITIQGNVKADEAMKLLKNFYK 149


>gi|295133748|ref|YP_003584424.1| guanine deaminase [Zunongwangia profunda SM-A87]
 gi|294981763|gb|ADF52228.1| guanine deaminase [Zunongwangia profunda SM-A87]
          Length = 158

 Score =  156 bits (397), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 41/139 (29%), Positives = 58/139 (41%), Gaps = 4/139 (2%)

Query: 2   KKGNVFMSCALEEAQNAALRN-EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +    FM  A+  A+         P GAV V + +II+   N      D TAHAEI AIR
Sbjct: 3   EDDKKFMRRAIALAEEGMNTGAGGPFGAVVVKDGEIIAEGWNIVTSSNDPTAHAEITAIR 62

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT-- 118
             C  L+   L    LY + EPC MC  AI  AR ++++Y  ++     I    QF    
Sbjct: 63  RACENLNTFQLENCVLYTSCEPCPMCLGAIYWARPKKVFYALNHSDAAKIGFDDQFIYEE 122

Query: 119 -LATCHHSPEIYPGISEQR 136
                 +    +  I  + 
Sbjct: 123 LDKDIENRKVPFVNILREE 141


>gi|68304978|gb|AAY89989.1| unknown [uncultured bacterium BAC13K9BAC]
          Length = 157

 Score =  156 bits (397), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 51/150 (34%), Positives = 85/150 (56%), Gaps = 2/150 (1%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNN--KIISRAGNRNRELKDVTAHAEILAI 59
           ++ ++F   A   A  A  ++E+PVGAV + ++  ++IS   N+ ++ +    HAE+LA+
Sbjct: 3   QQYHLFYELAYNLALVAYNQDEVPVGAVIIKDSTFEVISSGYNKMKQNRSSIDHAEMLAL 62

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
           +     L+ E L    +  TLEPC MCA AIS AR+  + + A + K GG+ NG   Y  
Sbjct: 63  KTAMTRLNNERLKGCSMITTLEPCPMCAQAISFARLSSIIFSAEDKKSGGVINGPVIYNS 122

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
           ++CHH P I       RS ++++ FF+ +R
Sbjct: 123 SSCHHKPSIIRFNDNGRSTKLLKKFFQNKR 152


>gi|262200337|ref|YP_003271545.1| CMP/dCMP deaminase zinc-binding protein [Gordonia bronchialis DSM
           43247]
 gi|262083684|gb|ACY19652.1| CMP/dCMP deaminase zinc-binding protein [Gordonia bronchialis DSM
           43247]
          Length = 143

 Score =  156 bits (397), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 53/128 (41%), Positives = 72/128 (56%), Gaps = 2/128 (1%)

Query: 24  IPVGAVAVLNNKI-ISRAGNRNRELKDVTAHAEILAIRMGCRILSQ-EILPEVDLYVTLE 81
           +P+GAV      I ++RA NR     D TAHAEILA+R           LP   + VT+E
Sbjct: 16  VPIGAVVFDPGGIELARAANRREADADPTAHAEILALRAAAAAFGDGWRLPGCTIAVTVE 75

Query: 82  PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141
           PCTMCA AI+LARI  L +GA  PK G + +           H P++  GI E R R+++
Sbjct: 76  PCTMCAGAITLARIDTLLFGAWEPKTGAVGSLWDVVRDPRLTHRPQVRGGIFEDRCRELM 135

Query: 142 QDFFKERR 149
            DFF+++R
Sbjct: 136 IDFFQQQR 143


>gi|163733416|ref|ZP_02140859.1| cytidine and deoxycytidylate deaminase family protein [Roseobacter
           litoralis Och 149]
 gi|161393204|gb|EDQ17530.1| cytidine and deoxycytidylate deaminase family protein [Roseobacter
           litoralis Och 149]
          Length = 149

 Score =  156 bits (397), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 69/131 (52%), Positives = 88/131 (67%), Gaps = 1/131 (0%)

Query: 20  LRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYV 78
            R E+PVGAV V  +  II+ AGN+ R   D TAHAE+LAIR  C +L  E L +  LYV
Sbjct: 19  KRGEVPVGAVVVDPDGLIIAAAGNQTRADLDPTAHAEMLAIRRACAVLGTERLIDHALYV 78

Query: 79  TLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSR 138
           TLEPC MCAAAIS ARI RLYYGA +PK GG+  G + ++   CHH+PE++ GI+   S 
Sbjct: 79  TLEPCAMCAAAISAARISRLYYGAGDPKSGGVAQGARVFSHPQCHHAPEVFDGIAAAESE 138

Query: 139 QIIQDFFKERR 149
            +++ FF  RR
Sbjct: 139 AMLKGFFTARR 149


>gi|149744219|ref|XP_001497309.1| PREDICTED: similar to deaminase domain containing 1 [Equus
           caballus]
          Length = 186

 Score =  156 bits (397), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 42/141 (29%), Positives = 69/141 (48%), Gaps = 8/141 (5%)

Query: 15  AQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI------LSQ 68
           A+ A    E+PVG + V NN+++ +  N   + K+ T HAE++AI               
Sbjct: 28  AKEALENIEVPVGCLMVYNNEVVGKGRNEVNQTKNATRHAEMVAIDQALAWCRGRGRCPA 87

Query: 69  EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF--YTLATCHHSP 126
           E+     LYVT+EPC MCAAA+ L +I  + YG  N + GG  +        L       
Sbjct: 88  EVFERAVLYVTVEPCVMCAAALRLMKIPLVVYGCQNERFGGCGSVLNIASADLPNTGRPF 147

Query: 127 EIYPGISEQRSRQIIQDFFKE 147
           +  PG   + + ++++ F+K+
Sbjct: 148 QCVPGYRAEEAVEMLKTFYKQ 168


>gi|148271718|ref|YP_001221279.1| putative cytosine/adenosine deaminase [Clavibacter michiganensis
           subsp. michiganensis NCPPB 382]
 gi|147829648|emb|CAN00564.1| putative cytosine/adenosine deaminase [Clavibacter michiganensis
           subsp. michiganensis NCPPB 382]
          Length = 149

 Score =  156 bits (396), Expect = 8e-37,   Method: Composition-based stats.
 Identities = 50/143 (34%), Positives = 73/143 (51%), Gaps = 1/143 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKI-ISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M+ AL+EA+  A   ++PVGAV V  + + I R  N     +D TAHAE+ A+R    + 
Sbjct: 1   MAVALDEARACAATGDVPVGAVVVDADGVVIGRGRNLREARQDPTAHAEVEALREAAAVT 60

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L    L VTLEPC MCA AI  AR+ R+ +GA + K G   +           H  
Sbjct: 61  GDRHLVGTTLVVTLEPCVMCAGAILAARVPRVVFGAWDEKAGAAGSLYDVLRDRRLPHRA 120

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E++ G++ +    ++  FF  RR
Sbjct: 121 EVFAGVAAEECAALLDGFFAGRR 143


>gi|254995140|ref|ZP_05277330.1| cytosine deaminase (ssnA) [Anaplasma marginale str. Mississippi]
 gi|255003311|ref|ZP_05278275.1| cytosine deaminase (ssnA) [Anaplasma marginale str. Puerto Rico]
 gi|255004436|ref|ZP_05279237.1| cytosine deaminase (ssnA) [Anaplasma marginale str. Virginia]
          Length = 153

 Score =  156 bits (396), Expect = 8e-37,   Method: Composition-based stats.
 Identities = 69/150 (46%), Positives = 94/150 (62%), Gaps = 5/150 (3%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKII-SRAGNRNRELKDVTAHAEILAI 59
           M   + +M  A++EA ++    E+PVGAV V    ++ S   N      D TAHAE+LAI
Sbjct: 2   MLSESPYMRLAMQEAVSSPA--EVPVGAVVVDERGVVVSSRHNLTLRNSDPTAHAEMLAI 59

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
           R  C  LS  +L   D+YVTLEPC MCA AISL+RIRRLY+GA N K GG+E+G + +  
Sbjct: 60  REACLHLSTHVLDNCDMYVTLEPCAMCAYAISLSRIRRLYFGAYNAKCGGVEHGARVFRF 119

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             CHH PE+Y G  E+ + +I++ FF + R
Sbjct: 120 --CHHIPEVYGGFLERENAEILKSFFYKLR 147


>gi|108805662|ref|YP_645599.1| tRNA-adenosine deaminase [Rubrobacter xylanophilus DSM 9941]
 gi|108766905|gb|ABG05787.1| tRNA-adenosine deaminase [Rubrobacter xylanophilus DSM 9941]
          Length = 167

 Score =  156 bits (396), Expect = 9e-37,   Method: Composition-based stats.
 Identities = 48/126 (38%), Positives = 66/126 (52%)

Query: 24  IPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83
           +PVGAV     ++++ A N      D TAHAE+LAIR     L    L    LY TLEPC
Sbjct: 38  VPVGAVVARGEEVLALASNEREATGDPTAHAELLAIRRAAAALGGWRLTGCTLYSTLEPC 97

Query: 84  TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQD 143
            MCA A   AR+ R+ Y A +PK G         +    +H+  +  G+  Q S  +++D
Sbjct: 98  PMCAGAAWAARLSRIVYAAPDPKAGYAGTLHNTPSDRRLNHTASVLGGLLAQESATLLRD 157

Query: 144 FFKERR 149
           FF+ERR
Sbjct: 158 FFRERR 163


>gi|257067545|ref|YP_003153800.1| tRNA-adenosine deaminase [Brachybacterium faecium DSM 4810]
 gi|256558363|gb|ACU84210.1| tRNA-adenosine deaminase [Brachybacterium faecium DSM 4810]
          Length = 162

 Score =  156 bits (396), Expect = 9e-37,   Method: Composition-based stats.
 Identities = 48/119 (40%), Positives = 65/119 (54%), Gaps = 1/119 (0%)

Query: 24  IPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEP 82
           +P+GAV V  +  +++ AGNR    +D TAHAEILA+R       +  L    L VTLEP
Sbjct: 34  VPIGAVVVAPDGAVLATAGNRREADEDPTAHAEILALRRAAAATGRWNLTGCTLVVTLEP 93

Query: 83  CTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141
           CTMCA AI LARIRR+  GA +PK G   +          +H  E+  G+  Q    ++
Sbjct: 94  CTMCAGAIVLARIRRVVVGAMDPKAGAAGSLYDLVREPRLNHRVELVTGVRGQECGDLL 152


>gi|222475328|ref|YP_002563745.1| cytosine deaminase (ssnA) [Anaplasma marginale str. Florida]
 gi|222419466|gb|ACM49489.1| cytosine deaminase (ssnA) [Anaplasma marginale str. Florida]
          Length = 154

 Score =  156 bits (396), Expect = 9e-37,   Method: Composition-based stats.
 Identities = 68/150 (45%), Positives = 94/150 (62%), Gaps = 5/150 (3%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRA-GNRNRELKDVTAHAEILAI 59
           M   + +M  A++EA ++    E+PVGAV V    ++  +  N      D TAHAE+LAI
Sbjct: 3   MLSESPYMRLAMQEAVSSPA--EVPVGAVVVDERGVVVSSKHNLTLRNSDPTAHAEMLAI 60

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
           R  C  LS  +L   D+YVTLEPC MCA AISL+RIRRLY+GA N K GG+E+G + +  
Sbjct: 61  REACLHLSTHVLDNCDMYVTLEPCAMCAYAISLSRIRRLYFGAYNAKCGGVEHGARVFRF 120

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             CHH PE+Y G  E+ + +I++ FF + R
Sbjct: 121 --CHHIPEVYGGFLERENAEILKSFFYKLR 148


>gi|56416962|ref|YP_154036.1| cytosine deaminase [Anaplasma marginale str. St. Maries]
 gi|56388194|gb|AAV86781.1| cytosine deaminase [Anaplasma marginale str. St. Maries]
          Length = 154

 Score =  156 bits (396), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 69/150 (46%), Positives = 94/150 (62%), Gaps = 5/150 (3%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKII-SRAGNRNRELKDVTAHAEILAI 59
           M   + +M  A++EA ++    E+PVGAV V    ++ S   N      D TAHAE+LAI
Sbjct: 3   MLSESPYMRLAMQEAVSSPA--EVPVGAVVVDERGVVVSSRHNLTLRNSDPTAHAEMLAI 60

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
           R  C  LS  +L   D+YVTLEPC MCA AISL+RIRRLY+GA N K GG+E+G + +  
Sbjct: 61  REACLHLSTHVLDNCDMYVTLEPCAMCAYAISLSRIRRLYFGAYNAKCGGVEHGARVFRF 120

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             CHH PE+Y G  E+ + +I++ FF + R
Sbjct: 121 --CHHIPEVYGGFLERENAEILKSFFYKLR 148


>gi|222530354|ref|YP_002574236.1| CMP/dCMP deaminase zinc-binding [Caldicellulosiruptor bescii DSM
           6725]
 gi|222457201|gb|ACM61463.1| CMP/dCMP deaminase zinc-binding [Caldicellulosiruptor bescii DSM
           6725]
          Length = 143

 Score =  156 bits (395), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 51/142 (35%), Positives = 77/142 (54%), Gaps = 6/142 (4%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M   +E A  +   N+IPV A  V + +IIS    +  + K    HAEILAI      LS
Sbjct: 7   MKTLIEYASRS---NDIPVAAAVVKDRRIISI---KRNDSKKAIYHAEILAIIDATSKLS 60

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
            + L   +++VT EPC MC +AI L++++RLY+GA + K G  E+          +H  E
Sbjct: 61  TKDLRSCEMFVTKEPCPMCMSAIVLSKVKRLYFGARDFKMGAAESCFNLSQNPFLNHKVE 120

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
           +  GI E   R +++ FF+E+R
Sbjct: 121 VIGGICEDECRLLLKRFFEEKR 142


>gi|78778025|ref|YP_394340.1| guanine deaminase [Sulfurimonas denitrificans DSM 1251]
 gi|78498565|gb|ABB45105.1| Guanine deaminase [Sulfurimonas denitrificans DSM 1251]
          Length = 149

 Score =  156 bits (395), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 47/141 (33%), Positives = 71/141 (50%), Gaps = 5/141 (3%)

Query: 3   KGNVFMSCALEEAQNAALRNEI-PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           K ++FM  A++EA     R +  P GAV V + K+I++A NR  +L D TAHAEI AIR 
Sbjct: 2   KHSIFMKKAIKEATFGVERGDGGPFGAVIVKDGKVIAKAHNRVLKLNDATAHAEIEAIRK 61

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
             + L    L E ++Y T  PC MC  AI  A I+ +Y+GA++     I    + +    
Sbjct: 62  ASKKLLTYDLSECEIYTTCMPCPMCMGAIRWANIKSVYFGATSQDADDIGFRDKEFYEKD 121

Query: 122 CHHSPEIYPGISEQRSRQIIQ 142
                E+   I      ++ +
Sbjct: 122 F---LEL-KNIQRAECLELFE 138


>gi|256826363|ref|YP_003150323.1| tRNA-adenosine deaminase [Kytococcus sedentarius DSM 20547]
 gi|256689756|gb|ACV07558.1| tRNA-adenosine deaminase [Kytococcus sedentarius DSM 20547]
          Length = 159

 Score =  156 bits (395), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 47/146 (32%), Positives = 71/146 (48%), Gaps = 1/146 (0%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
             ++  AL   + A    ++PVGAV +    ++I R  NR     D  AHAE++A+R   
Sbjct: 13  EAWIGHALRAGEQALAAGDVPVGAVVIGPGGQVIGRGWNRREAEGDPLAHAEVVAMRAAA 72

Query: 64  RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123
            +     L +  L VTLEPC MCA AI  ARI  + +GA + K G   +       +   
Sbjct: 73  AVRGGWRLEDCALAVTLEPCLMCAGAIGQARIPLVVFGAWDAKAGACGSVWDVLRDSAAL 132

Query: 124 HSPEIYPGISEQRSRQIIQDFFKERR 149
           H  E+  G+ ++   + + DFF  RR
Sbjct: 133 HRAEVRGGVRQEDCGRTLGDFFVTRR 158


>gi|163745925|ref|ZP_02153284.1| cytidine and deoxycytidylate deaminase family protein [Oceanibulbus
           indolifex HEL-45]
 gi|161380670|gb|EDQ05080.1| cytidine and deoxycytidylate deaminase family protein [Oceanibulbus
           indolifex HEL-45]
          Length = 145

 Score =  155 bits (394), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 59/130 (45%), Positives = 85/130 (65%), Gaps = 1/130 (0%)

Query: 21  RNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVT 79
           R E+PVGAV V    +I++ AGN  R   D TAHAE+LA+R  C  +  E L    LYVT
Sbjct: 14  RGEVPVGAVVVSPAGQIVAAAGNETRARNDPTAHAEMLALRAACAAVGSERLIGHALYVT 73

Query: 80  LEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139
           LEPC MCA AI+ AR+ RL+YGA++PK GG+  G + ++   CHH P+++ GI+ + +  
Sbjct: 74  LEPCAMCAGAIAAARVERLFYGAADPKSGGVAQGARVFSHPQCHHVPQVFDGIAGREAED 133

Query: 140 IIQDFFKERR 149
           ++  FF+ +R
Sbjct: 134 LLIKFFQAKR 143


>gi|187924315|ref|YP_001895957.1| CMP/dCMP deaminase zinc-binding [Burkholderia phytofirmans PsJN]
 gi|187715509|gb|ACD16733.1| CMP/dCMP deaminase zinc-binding [Burkholderia phytofirmans PsJN]
          Length = 171

 Score =  155 bits (394), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 44/122 (36%), Positives = 64/122 (52%)

Query: 24  IPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83
           +PVGAV V   ++I+   N      D +AHAE+ A+R   + +    LP  +LYVTLEPC
Sbjct: 17  VPVGAVLVRGEEVIATGFNHPIGGHDPSAHAEMAALRAAAQAVENYRLPGCELYVTLEPC 76

Query: 84  TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQD 143
            MCA AI  ARI R+ +GA +PK G   +    +     +H   +  G+ E      ++ 
Sbjct: 77  LMCAGAIMHARIARVVFGARDPKTGACGSVVDAFANPQLNHHTTVIGGVLENECGAALKS 136

Query: 144 FF 145
           FF
Sbjct: 137 FF 138


>gi|56757936|gb|AAW27108.1| SJCHGC09107 protein [Schistosoma japonicum]
          Length = 165

 Score =  155 bits (394), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 48/149 (32%), Positives = 75/149 (50%), Gaps = 9/149 (6%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR---MGCR 64
           M  A E AQ A   NE+PVG   V   ++I+   N     +D T HAE++ IR     CR
Sbjct: 1   MDVAFELAQEALKCNEVPVGCAFVYKGEVIASGRNEVNATRDATQHAEMITIRHLEQWCR 60

Query: 65  IL---SQEILPEVDLYVTLEPCTMCAAAISL---ARIRRLYYGASNPKGGGIENGTQFYT 118
                  ++L E DLYVT+EPC MC AAI     A ++ + YGA N + GG  +    + 
Sbjct: 61  KNEIEFDKVLTECDLYVTVEPCIMCTAAIRFCLPAHLKSITYGARNERFGGCGSVLSVHN 120

Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKE 147
             +   +    PG+  + + ++++ F+ +
Sbjct: 121 SPSSVPALNCVPGVEAETAVKLLKRFYAQ 149


>gi|15610888|ref|NP_218269.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis
           H37Rv]
 gi|15843372|ref|NP_338409.1| cytidine and deoxycytidylate deaminase family protein
           [Mycobacterium tuberculosis CDC1551]
 gi|31794922|ref|NP_857415.1| cytidine/deoxycytidylate deaminase [Mycobacterium bovis AF2122/97]
 gi|121639666|ref|YP_979890.1| putative cytidine/deoxycytidylate deaminase [Mycobacterium bovis
           BCG str. Pasteur 1173P2]
 gi|148663618|ref|YP_001285141.1| cytidine and deoxycytidylate deaminase family protein
           [Mycobacterium tuberculosis H37Ra]
 gi|148824957|ref|YP_001289711.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis F11]
 gi|167970913|ref|ZP_02553190.1| hypothetical cytidine/deoxycytidylate deaminase [Mycobacterium
           tuberculosis H37Ra]
 gi|215405807|ref|ZP_03417988.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis
           02_1987]
 gi|215413680|ref|ZP_03422348.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis
           94_M4241A]
 gi|215424998|ref|ZP_03422917.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis T92]
 gi|215448096|ref|ZP_03434848.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis T85]
 gi|218755535|ref|ZP_03534331.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis GM
           1503]
 gi|219559836|ref|ZP_03538912.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis T17]
 gi|224992162|ref|YP_002646851.1| putative cytidine/deoxycytidylate deaminase [Mycobacterium bovis
           BCG str. Tokyo 172]
 gi|253800799|ref|YP_003033800.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis KZN
           1435]
 gi|254366297|ref|ZP_04982341.1| hypothetical cytidine/deoxycytidylate deaminase [Mycobacterium
           tuberculosis str. Haarlem]
 gi|254552866|ref|ZP_05143313.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis
           '98-R604 INH-RIF-EM']
 gi|260184675|ref|ZP_05762149.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis
           CPHL_A]
 gi|260198800|ref|ZP_05766291.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis T46]
 gi|260202955|ref|ZP_05770446.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis K85]
 gi|289441188|ref|ZP_06430932.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis T46]
 gi|289445351|ref|ZP_06435095.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis
           CPHL_A]
 gi|289556017|ref|ZP_06445227.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis KZN
           605]
 gi|289571998|ref|ZP_06452225.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis T17]
 gi|289572402|ref|ZP_06452629.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis K85]
 gi|289747592|ref|ZP_06506970.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis
           02_1987]
 gi|289748271|ref|ZP_06507649.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis T92]
 gi|289759914|ref|ZP_06519292.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis T85]
 gi|289763934|ref|ZP_06523312.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis GM
           1503]
 gi|294995336|ref|ZP_06801027.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis 210]
 gi|297636433|ref|ZP_06954213.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis KZN
           4207]
 gi|297733427|ref|ZP_06962545.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis KZN
           R506]
 gi|298527225|ref|ZP_07014634.1| hypothetical cytidine/deoxycytidylate deaminase [Mycobacterium
           tuberculosis 94_M4241A]
 gi|306778112|ref|ZP_07416449.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis
           SUMu001]
 gi|306778644|ref|ZP_07416981.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis
           SUMu002]
 gi|306786666|ref|ZP_07424988.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis
           SUMu003]
 gi|306791033|ref|ZP_07429355.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis
           SUMu004]
 gi|306791352|ref|ZP_07429654.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis
           SUMu005]
 gi|306795417|ref|ZP_07433719.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis
           SUMu006]
 gi|306801392|ref|ZP_07438060.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis
           SUMu008]
 gi|306805598|ref|ZP_07442266.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis
           SUMu007]
 gi|306969995|ref|ZP_07482656.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis
           SUMu009]
 gi|306974229|ref|ZP_07486890.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis
           SUMu010]
 gi|307081937|ref|ZP_07491107.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis
           SUMu011]
 gi|307086550|ref|ZP_07495663.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis
           SUMu012]
 gi|313660758|ref|ZP_07817638.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis KZN
           V2475]
 gi|2960176|emb|CAA18074.1| POSSIBLE CYTIDINE/DEOXYCYTIDYLATE DEAMINASE [Mycobacterium
           tuberculosis H37Rv]
 gi|13883737|gb|AAK48223.1| cytidine and deoxycytidylate deaminase family protein
           [Mycobacterium tuberculosis CDC1551]
 gi|31620520|emb|CAD95964.1| POSSIBLE CYTIDINE/DEOXYCYTIDYLATE DEAMINASE [Mycobacterium bovis
           AF2122/97]
 gi|121495314|emb|CAL73801.1| Possible cytidine/deoxycytidylate deaminase [Mycobacterium bovis
           BCG str. Pasteur 1173P2]
 gi|134151809|gb|EBA43854.1| hypothetical cytidine/deoxycytidylate deaminase [Mycobacterium
           tuberculosis str. Haarlem]
 gi|148507770|gb|ABQ75579.1| cytidine and deoxycytidylate deaminase family protein
           [Mycobacterium tuberculosis H37Ra]
 gi|148723484|gb|ABR08109.1| hypothetical cytidine/deoxycytidylate deaminase [Mycobacterium
           tuberculosis F11]
 gi|224775277|dbj|BAH28083.1| putative cytidine/deoxycytidylate deaminase [Mycobacterium bovis
           BCG str. Tokyo 172]
 gi|253322302|gb|ACT26905.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis KZN
           1435]
 gi|289414107|gb|EFD11347.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis T46]
 gi|289418309|gb|EFD15510.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis
           CPHL_A]
 gi|289440649|gb|EFD23142.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis KZN
           605]
 gi|289536833|gb|EFD41411.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis K85]
 gi|289545752|gb|EFD49400.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis T17]
 gi|289688120|gb|EFD55608.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis
           02_1987]
 gi|289688858|gb|EFD56287.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis T92]
 gi|289711440|gb|EFD75456.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis GM
           1503]
 gi|289715478|gb|EFD79490.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis T85]
 gi|298497019|gb|EFI32313.1| hypothetical cytidine/deoxycytidylate deaminase [Mycobacterium
           tuberculosis 94_M4241A]
 gi|308213634|gb|EFO73033.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis
           SUMu001]
 gi|308328367|gb|EFP17218.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis
           SUMu002]
 gi|308328772|gb|EFP17623.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis
           SUMu003]
 gi|308332614|gb|EFP21465.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis
           SUMu004]
 gi|308340105|gb|EFP28956.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis
           SUMu005]
 gi|308344093|gb|EFP32944.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis
           SUMu006]
 gi|308347895|gb|EFP36746.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis
           SUMu007]
 gi|308351763|gb|EFP40614.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis
           SUMu008]
 gi|308352546|gb|EFP41397.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis
           SUMu009]
 gi|308356497|gb|EFP45348.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis
           SUMu010]
 gi|308360445|gb|EFP49296.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis
           SUMu011]
 gi|308364027|gb|EFP52878.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis
           SUMu012]
 gi|323717617|gb|EGB26819.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis
           CDC1551A]
 gi|326905590|gb|EGE52523.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis
           W-148]
 gi|328460526|gb|AEB05949.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis KZN
           4207]
          Length = 152

 Score =  155 bits (393), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 44/118 (37%), Positives = 63/118 (53%), Gaps = 1/118 (0%)

Query: 33  NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQ-EILPEVDLYVTLEPCTMCAAAIS 91
           +   ++RA N    L D TAHAEILA+R+   +L     L    L VT+EPCTMCA A+ 
Sbjct: 33  DGTELARAVNAREALGDPTAHAEILAMRLAAGVLGDGWRLEGTTLAVTVEPCTMCAGALV 92

Query: 92  LARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
           LAR+ RL +GA  PK G + +          +H PE+  G+  +     ++ FF  +R
Sbjct: 93  LARVARLVFGAWEPKTGAVGSLWDVVRDRRLNHRPEVRGGVLARECAAPLEAFFARQR 150


>gi|194015030|ref|ZP_03053647.1| cytidine/deoxycytidylate deaminase family protein [Bacillus pumilus
           ATCC 7061]
 gi|194014056|gb|EDW23621.1| cytidine/deoxycytidylate deaminase family protein [Bacillus pumilus
           ATCC 7061]
          Length = 156

 Score =  155 bits (393), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 37/115 (32%), Positives = 52/115 (45%), Gaps = 1/115 (0%)

Query: 3   KGNVFMSCALEEAQNAALRN-EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
               F+  A++ A          P GAV V + +II+   N      D TAHAE+ AIR 
Sbjct: 2   NHEDFLQRAIDLAVEGVNSGTGGPFGAVIVKDGQIIAEGSNNVTTTNDPTAHAEVTAIRK 61

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116
            C+ L+   L +  LY + EPC MC  AI  AR + +Y+ A +           F
Sbjct: 62  ACQTLNTYQLEDCILYTSCEPCPMCLGAIYWARPKAVYFAAGHQDAAVSGFDDSF 116


>gi|311030254|ref|ZP_07708344.1| hypothetical protein Bm3-1_06896 [Bacillus sp. m3-13]
          Length = 158

 Score =  155 bits (393), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 43/116 (37%), Positives = 55/116 (47%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M     F+  A++ A      N  P GAV   NN+II+   NR     D TAHAE++AIR
Sbjct: 3   MHLHEFFLHRAIDLALQNVQENGGPFGAVITKNNQIIAEGVNRVTSNHDPTAHAEVMAIR 62

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116
             C  L    L +  LY + EPC MC  AI  ARI  +Y+ A       I    +F
Sbjct: 63  KACHSLQTFELRDCILYSSCEPCPMCLGAIYWARIPTVYFAADRKDAASIHFDDEF 118


>gi|163740840|ref|ZP_02148233.1| cytidine and deoxycytidylate deaminase family protein [Phaeobacter
           gallaeciensis 2.10]
 gi|161385831|gb|EDQ10207.1| cytidine and deoxycytidylate deaminase family protein [Phaeobacter
           gallaeciensis 2.10]
          Length = 147

 Score =  155 bits (393), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 66/129 (51%), Positives = 87/129 (67%), Gaps = 1/129 (0%)

Query: 22  NEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80
            E+PVGA  +    ++++RAGNR RE  D TAHAE+L IR  C     E L   DLYVTL
Sbjct: 15  GEVPVGAALISPEGQVVARAGNRTRERSDPTAHAEVLVIREACAAAGSERLTGHDLYVTL 74

Query: 81  EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140
           EPC MCAAAI+ ARIRR+YYGAS+PK GG+ +G   ++    HH+PE+Y GIS + +  +
Sbjct: 75  EPCAMCAAAIAAARIRRVYYGASDPKSGGVAHGACVFSHPQAHHAPEVYEGISAEPAETL 134

Query: 141 IQDFFKERR 149
           ++ FF  RR
Sbjct: 135 LKAFFAARR 143


>gi|218441962|ref|YP_002380291.1| CMP/dCMP deaminase zinc-binding [Cyanothece sp. PCC 7424]
 gi|218174690|gb|ACK73423.1| CMP/dCMP deaminase zinc-binding [Cyanothece sp. PCC 7424]
          Length = 158

 Score =  155 bits (393), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 42/114 (36%), Positives = 58/114 (50%), Gaps = 1/114 (0%)

Query: 4   GNVFMSCALEEAQNAALRNEI-PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
            + FM+ A+  +       E  P GAV V   KII++  N+     D TAHAE++AIR  
Sbjct: 5   NDQFMAEAIALSFEGMRLGEGGPFGAVIVKEGKIIAKGYNQVISSNDPTAHAEVVAIRHA 64

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116
           C++L    L   +LY + EPC MC  AI  AR+ ++YYG S      I     F
Sbjct: 65  CQVLQNFDLKGCELYTSCEPCPMCLGAIYWARLDKIYYGNSKIDAAKIGFDDNF 118


>gi|322783203|gb|EFZ10789.1| hypothetical protein SINV_01360 [Solenopsis invicta]
          Length = 175

 Score =  155 bits (392), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 38/147 (25%), Positives = 73/147 (49%), Gaps = 8/147 (5%)

Query: 6   VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
            +M+ AL++A+ +    E+PVG + + NN++I+   N   E  + T HAEI  I    + 
Sbjct: 5   AWMNVALQKAEESLRAGEVPVGCLFIYNNEVIATGNNTVNETCNATRHAEINCIDQVLKF 64

Query: 66  LSQEI------LPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
             ++          +D+ VT+EPC MC +A+   ++  + YG +N + GG  +  +    
Sbjct: 65  CKEKRVDYETVFRNLDVIVTVEPCIMCMSALLQLQVHSIVYGCANDRFGGCGSVLEV--Q 122

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFK 146
                   I   +  + + +++QDF+K
Sbjct: 123 KFYDPKIVIQGNVKGEEAMRLLQDFYK 149


>gi|291165661|gb|EFE27710.1| cytidine/deoxycytidylate deaminase family protein [Filifactor
           alocis ATCC 35896]
          Length = 150

 Score =  155 bits (392), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 41/146 (28%), Positives = 68/146 (46%), Gaps = 3/146 (2%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           + +M  A  EA  +  + E+PVGAV V ++ II R  N     +    HAE++AI+   +
Sbjct: 2   DCYMEEAFREALYSYQKEEVPVGAVIVKDDVIIGRGHNVIETHQSSVCHAEMIAIQQAQK 61

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
            L    L    +YVTLEPC MC  AI  +R+  L+    + + G   +           +
Sbjct: 62  HLRNWRLNGAKMYVTLEPCLMCMGAILNSRLSELHIATRDFERGAAVSRVPLILEDKIPN 121

Query: 125 SPEIYPGISEQR-SRQIIQDFFKERR 149
              +Y  + +      +++ FF+E R
Sbjct: 122 KLMVY--LYDDETCTYLLKRFFRELR 145


>gi|33865610|ref|NP_897169.1| cytidine/deoxycytidylate deaminase family protein [Synechococcus
           sp. WH 8102]
 gi|33632780|emb|CAE07591.1| cytidine/deoxycytidylate deaminase family protein [Synechococcus
           sp. WH 8102]
          Length = 157

 Score =  155 bits (392), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 39/140 (27%), Positives = 64/140 (45%), Gaps = 1/140 (0%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           +M   L  A       E+PV AV +    + I    NR    +D   HAE++A+     I
Sbjct: 10  WMEVLLARASVNGDSGEVPVAAVILDEQGRCIGHGRNRRERCQDPLGHAELVALSQAATI 69

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
                     L VTLEPC MCA A+  AR+  + +GA++ K GG+          + HH 
Sbjct: 70  RGDWRFNPCTLLVTLEPCPMCAGALVQARMGTVIFGATDRKRGGLGGCINLADDPSAHHH 129

Query: 126 PEIYPGISEQRSRQIIQDFF 145
             +   + ++R+ + ++ +F
Sbjct: 130 MRVVGPLMQERAAEQLEIWF 149


>gi|86140015|ref|ZP_01058579.1| cytidine and deoxycytidylate deaminase family protein [Roseobacter
           sp. MED193]
 gi|85823265|gb|EAQ43476.1| cytidine and deoxycytidylate deaminase family protein [Roseobacter
           sp. MED193]
          Length = 148

 Score =  155 bits (392), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 69/131 (52%), Positives = 89/131 (67%), Gaps = 1/131 (0%)

Query: 20  LRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYV 78
            R E+PVGAV V  + +I ++AGNR REL D TAHAEIL +R  C     E L   DLYV
Sbjct: 18  QRGEVPVGAVLVAPDGRIAAQAGNRTRELSDPTAHAEILVLREACAAGKTERLQGFDLYV 77

Query: 79  TLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSR 138
           TLEPC MCAAAI+ AR+RR+YYGAS+PK GG+ +G   ++    HH+PEIY GI E  + 
Sbjct: 78  TLEPCAMCAAAIAAARLRRVYYGASDPKSGGVAHGACVFSHPQAHHTPEIYEGIGEVEAA 137

Query: 139 QIIQDFFKERR 149
           ++++ FF   R
Sbjct: 138 ELLRAFFSHLR 148


>gi|157691996|ref|YP_001486458.1| guanine deaminase [Bacillus pumilus SAFR-032]
 gi|157680754|gb|ABV61898.1| guanine deaminase [Bacillus pumilus SAFR-032]
          Length = 156

 Score =  155 bits (392), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 37/115 (32%), Positives = 52/115 (45%), Gaps = 1/115 (0%)

Query: 3   KGNVFMSCALEEAQNAALRN-EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
               F+  A++ A          P GAV V + +II+   N      D TAHAE+ AIR 
Sbjct: 2   NHEDFLQRAIDLAVEGVNSGTGGPFGAVIVKDGQIIAEGSNNVTTTNDPTAHAEVTAIRK 61

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116
            C+ L+   L +  LY + EPC MC  AI  AR + +Y+ A +           F
Sbjct: 62  ACQTLNTYQLEDCILYTSCEPCPMCLGAIYWARPKAVYFAAGHQDAAVSGFDDSF 116


>gi|328872297|gb|EGG20664.1| adenosine deaminase [Dictyostelium fasciculatum]
          Length = 307

 Score =  155 bits (392), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 50/193 (25%), Positives = 79/193 (40%), Gaps = 48/193 (24%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAI 59
           ++K + +M  A+E+   A    E+PVG V V  N  +I+R  N+    K+ T HAEI A+
Sbjct: 68  IEKHSKYMRLAIEQGYIALNEGEVPVGCVIVHRNGTVIARGFNKTNIKKNATRHAEIEAL 127

Query: 60  R---------------------------------------------MGCRILSQEILPEV 74
                                                          G  I S+++L E 
Sbjct: 128 DSIYLDNVNNYNNNNNNNNNNNNNNNNNNNNNNNNNNNGHHQHVDLNGIDIHSEDLLSEC 187

Query: 75  DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA--TCHHSPEIYPGI 132
            LYVT+EPC MCAA + L++I  +Y+G  N K GG  +    +        H      G+
Sbjct: 188 TLYVTVEPCIMCAAILQLSKIGMVYFGCYNDKFGGNGSILPIHNATCVENGHPYNCVSGL 247

Query: 133 SEQRSRQIIQDFF 145
            +  +  ++Q F+
Sbjct: 248 LKDEAVYLLQKFY 260


>gi|310819974|ref|YP_003952332.1| cytidine and deoxycytidylate deaminase zinc-binding
           domain-containing protein [Stigmatella aurantiaca
           DW4/3-1]
 gi|309393046|gb|ADO70505.1| Cytidine and deoxycytidylate deaminase zinc-binding domain protein
           [Stigmatella aurantiaca DW4/3-1]
          Length = 154

 Score =  155 bits (392), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 55/147 (37%), Positives = 74/147 (50%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
               FM  AL  A+ A    E+PVGAVAV   ++I    NR    +   AHAE+LA+   
Sbjct: 2   SDEAFMQQALALAREAEALGEVPVGAVAVHQGQVIGTGFNRREIDRHPFAHAELLALDAA 61

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
            R L    L  V LYVTLEPC MCA A+   R+ RL +G  +PK G   +          
Sbjct: 62  ARSLGVWRLTGVTLYVTLEPCAMCAGAMVQGRVTRLVFGTLDPKAGAAGSLYNLVEEPRH 121

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
           +H  ++  GI    SRQ+++ FF+  R
Sbjct: 122 NHRLQVTSGILADESRQLLKGFFERLR 148


>gi|114798136|ref|YP_761455.1| cytidine/deoxycytidylate deaminase family protein [Hyphomonas
           neptunium ATCC 15444]
 gi|114738310|gb|ABI76435.1| cytidine/deoxycytidylate deaminase family protein [Hyphomonas
           neptunium ATCC 15444]
          Length = 146

 Score =  154 bits (391), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 63/145 (43%), Positives = 87/145 (60%), Gaps = 3/145 (2%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLN--NKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M+ A+E A+ AA   E+PVGAV V     +I+    NR     D +AHAEI+AIR   + 
Sbjct: 1   MARAMELAREAAKAGEVPVGAVVVDPETGEIVGEGYNRPVGTHDPSAHAEIIAIRAAAQK 60

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           L    L  +DL+VTLEPC MCA AIS ARI RL + A++ KGG + +G +F+   TCH  
Sbjct: 61  LGNYRLTGLDLHVTLEPCAMCAGAISFARIGRLVFAAADIKGGAVMSGPRFFEQPTCHWR 120

Query: 126 PEIYPG-ISEQRSRQIIQDFFKERR 149
           PE     + E  +  +++DFF+ RR
Sbjct: 121 PEWRQDALHEAEAADLLRDFFRTRR 145


>gi|317476774|ref|ZP_07936017.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Bacteroides eggerthii 1_2_48FAA]
 gi|316906949|gb|EFV28660.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Bacteroides eggerthii 1_2_48FAA]
          Length = 187

 Score =  154 bits (391), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 35/118 (29%), Positives = 55/118 (46%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
            +   +M  A++ +         P GAV V + ++I+   NR     D TAHAE+ AIR 
Sbjct: 33  DEDARYMRMAIDLSVENIDNGGGPFGAVIVRDGEVIATGVNRVVPNNDPTAHAEVNAIRN 92

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
            C+ L    L    +Y + EPC MC +A+  A ++R+ YG +      I+    F   
Sbjct: 93  ACQKLDTFQLEGCTVYSSCEPCPMCLSALYWAGVKRICYGNTKADAKAIDFDDSFIYD 150


>gi|194900476|ref|XP_001979783.1| GG22115 [Drosophila erecta]
 gi|190651486|gb|EDV48741.1| GG22115 [Drosophila erecta]
          Length = 160

 Score =  154 bits (391), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 47/147 (31%), Positives = 71/147 (48%), Gaps = 9/147 (6%)

Query: 6   VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
            FM  AL EA+ A    E+PVG V V   K+++R GN     ++ T HAE + I      
Sbjct: 3   AFMEEALVEARRARDAGEVPVGCVFVHGGKVVARGGNEVNVHRNATRHAEFICIDAILAS 62

Query: 66  LSQEILP------EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
             +  LP      E+ + VT+EPC MC+AA+    ++ + YG  N + GG    T     
Sbjct: 63  CRERRLPARQLFSEITVVVTVEPCIMCSAALHTLGVKEIIYGCENDRFGG---KTVVDVA 119

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFK 146
           A      EI  G+    +  +++DF+K
Sbjct: 120 AVVGQRIEITGGVRADEAMALLKDFYK 146


>gi|325289744|ref|YP_004265925.1| Guanine deaminase [Syntrophobotulus glycolicus DSM 8271]
 gi|324965145|gb|ADY55924.1| Guanine deaminase [Syntrophobotulus glycolicus DSM 8271]
          Length = 154

 Score =  154 bits (391), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 50/150 (33%), Positives = 71/150 (47%), Gaps = 10/150 (6%)

Query: 5   NVFMSCALEEAQNAALRNEI-PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
           N+FM  A  EA+      E  P GAV V   K+I+ A N     +D TAHAEI+AIR   
Sbjct: 2   NLFMQQAYREAKTGMTAGEGGPFGAVVVREGKVIASAHNIVLLTQDSTAHAEIVAIRKAE 61

Query: 64  RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123
           R+L    L   +LY T  PC MC  AI  ARI ++YYG +  +   I    + +  A   
Sbjct: 62  RLLGTHDLSGCELYTTSYPCPMCLGAIMWARISKVYYGCTPEQVSKIGFDDKVFYEAIED 121

Query: 124 HSPEIYPGI--SEQ----RSRQIIQDFFKE 147
            +     G+   E        +++ D+ K+
Sbjct: 122 PNA---SGLISLEHSDSGECLKLLADWIKK 148


>gi|20092219|ref|NP_618294.1| cytidine/deoxycytidylate deaminase family protein [Methanosarcina
           acetivorans C2A]
 gi|19917452|gb|AAM06774.1| cytidine/deoxycytidylate deaminase family protein [Methanosarcina
           acetivorans C2A]
          Length = 162

 Score =  154 bits (391), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 43/146 (29%), Positives = 68/146 (46%), Gaps = 3/146 (2%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           +K  +FM  A+E +  +  +   P GAV   N KIIS + N+   L D TAHAEI AIR 
Sbjct: 8   EKDTLFMRRAIELSLESVKKGGGPFGAVITKNGKIISESCNQVTVLNDPTAHAEISAIRE 67

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL-- 119
             R L+   L   ++Y + EPC MC  AI  ARI R+++  +      I     F     
Sbjct: 68  AARKLNAPDLKGCEIYASCEPCPMCLGAIYWARIDRVFFANTREDADNIGFDDSFIYEEI 127

Query: 120 -ATCHHSPEIYPGISEQRSRQIIQDF 144
             +       +  +  + + +  +++
Sbjct: 128 PRSLRERSIEFRQLLREEALEAFREW 153


>gi|254233244|ref|ZP_04926570.1| hypothetical protein TBCG_03677 [Mycobacterium tuberculosis C]
 gi|124603037|gb|EAY61312.1| hypothetical protein TBCG_03677 [Mycobacterium tuberculosis C]
          Length = 152

 Score =  154 bits (391), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 43/118 (36%), Positives = 63/118 (53%), Gaps = 1/118 (0%)

Query: 33  NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQ-EILPEVDLYVTLEPCTMCAAAIS 91
           +   ++RA N    L D TAHAEILA+R+   +L     L    L VT+EPCTMCA A+ 
Sbjct: 33  DGTELARAVNAREALGDPTAHAEILAMRLAAGVLGDGWRLEGTTLAVTVEPCTMCAGALV 92

Query: 92  LARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
           +AR+ RL +GA  PK G + +          +H PE+  G+  +     ++ FF  +R
Sbjct: 93  MARVARLVFGAWEPKTGAVGSLWDVVRDRRLNHRPEVRGGVLARECAAPLEAFFARQR 150


>gi|86143339|ref|ZP_01061741.1| guanine deaminase [Leeuwenhoekiella blandensis MED217]
 gi|85830244|gb|EAQ48704.1| guanine deaminase [Leeuwenhoekiella blandensis MED217]
          Length = 156

 Score =  154 bits (391), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 41/115 (35%), Positives = 53/115 (46%), Gaps = 1/115 (0%)

Query: 3   KGNVFMSCALEEAQNAALRNEI-PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
               +M  A+  A      NE  P G V V + KII +  N+     D TAHAE+ AIR 
Sbjct: 2   DHKHYMQEAVTAALKGMQNNEGGPFGCVIVKDGKIIGKGNNKVTSTNDPTAHAEVTAIRD 61

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116
            C+ L    L    LY + EPC MC  AI  AR  ++YYG++      I     F
Sbjct: 62  ACKNLGSFQLEGCILYTSCEPCPMCLGAIYWARPEKVYYGSTKTDAAHIGFDDDF 116


>gi|52079816|ref|YP_078607.1| guanine deaminase [Bacillus licheniformis ATCC 14580]
 gi|52785186|ref|YP_091015.1| GuaD [Bacillus licheniformis ATCC 14580]
 gi|319646374|ref|ZP_08000604.1| GuaD protein [Bacillus sp. BT1B_CT2]
 gi|52003027|gb|AAU22969.1| guanine deaminase [Bacillus licheniformis ATCC 14580]
 gi|52347688|gb|AAU40322.1| GuaD [Bacillus licheniformis ATCC 14580]
 gi|317392124|gb|EFV72921.1| GuaD protein [Bacillus sp. BT1B_CT2]
          Length = 156

 Score =  154 bits (390), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 37/115 (32%), Positives = 52/115 (45%), Gaps = 1/115 (0%)

Query: 3   KGNVFMSCALEEAQNAALRN-EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
               F+  A++ A  +       P GAV V + +II+   N      D TAHAE+ AIR+
Sbjct: 2   NHEAFLQRAIDLAVESVKSGTGGPFGAVIVKDGQIIAEGKNNVTTSNDPTAHAEVTAIRL 61

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116
            C  L    L +  LY + EPC MC  AI  AR + +Y+ A +           F
Sbjct: 62  ACEALGDYQLNDCILYTSCEPCPMCLGAIYWARPKEVYFAAQHSDAASAGFDDSF 116


>gi|125975000|ref|YP_001038910.1| guanine deaminase [Clostridium thermocellum ATCC 27405]
 gi|256005114|ref|ZP_05430084.1| CMP/dCMP deaminase zinc-binding [Clostridium thermocellum DSM 2360]
 gi|281418582|ref|ZP_06249601.1| CMP/dCMP deaminase zinc-binding [Clostridium thermocellum JW20]
 gi|125715225|gb|ABN53717.1| Guanine deaminase [Clostridium thermocellum ATCC 27405]
 gi|255990965|gb|EEU01077.1| CMP/dCMP deaminase zinc-binding [Clostridium thermocellum DSM 2360]
 gi|281407666|gb|EFB37925.1| CMP/dCMP deaminase zinc-binding [Clostridium thermocellum JW20]
 gi|316939161|gb|ADU73195.1| CMP/dCMP deaminase zinc-binding protein [Clostridium thermocellum
           DSM 1313]
          Length = 154

 Score =  154 bits (390), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 46/128 (35%), Positives = 69/128 (53%), Gaps = 9/128 (7%)

Query: 5   NVFMSCALEEAQNAALRN-EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
           + FM  A++EA +   +N   P GAV V +N+II+RA N   +  D T HAE++AIR   
Sbjct: 2   DDFMKEAVKEAVSGMRQNHGGPFGAVIVKDNEIIARAHNEVIKNNDPTDHAEMIAIRKAA 61

Query: 64  RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123
           + LS+  L + +LY + EPC MC AAI  A+I+++YYG +      I     +       
Sbjct: 62  KKLSRFDLGDCELYSSCEPCPMCFAAIHWAKIKKVYYGCTREDAAKIGFDDNYI------ 115

Query: 124 HSPEIYPG 131
              E+  G
Sbjct: 116 --YEVIKG 121


>gi|294084707|ref|YP_003551465.1| CMP/dCMP deaminase, zinc-binding protein [Candidatus
           Puniceispirillum marinum IMCC1322]
 gi|292664280|gb|ADE39381.1| CMP/dCMP deaminase, zinc-binding protein [Candidatus
           Puniceispirillum marinum IMCC1322]
          Length = 149

 Score =  154 bits (390), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 50/127 (39%), Positives = 75/127 (59%), Gaps = 1/127 (0%)

Query: 24  IPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEP 82
           +PV A  V  +  +++   NR     +   HAEILAI           L   DL+VTLEP
Sbjct: 23  VPVAAAIVAPDGTVVALESNRMVRDGNALHHAEILAINAALAKTGGSRLDGYDLWVTLEP 82

Query: 83  CTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQ 142
           C MCA AI+ AR+RR+Y+ A + K G +E+G +++   +C+H PE+Y G+SEQ +  ++ 
Sbjct: 83  CAMCAGAIAHARLRRVYFAAYDAKAGAVESGIRYFDHPSCNHRPEVYGGLSEQAASIMLS 142

Query: 143 DFFKERR 149
           DFF  +R
Sbjct: 143 DFFAAKR 149


>gi|262341257|ref|YP_003284112.1| cytidine/deoxycytidylate deaminase family protein [Blattabacterium
           sp. (Blattella germanica) str. Bge]
 gi|262272594|gb|ACY40502.1| cytidine/deoxycytidylate deaminase family protein [Blattabacterium
           sp. (Blattella germanica) str. Bge]
          Length = 148

 Score =  154 bits (390), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 50/142 (35%), Positives = 76/142 (53%), Gaps = 5/142 (3%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  AL+EA  A  +NE+P+GA     + +I++A N      ++TAHAE+L I +    L 
Sbjct: 1   MKIALKEAFIAFHKNEVPIGAAITYEDVVIAKAHNLTETFSNITAHAEMLVINLASNYLR 60

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
            + + +  LYVTLEPC MCA A+ L++I R+  GA N    G       Y+    H   +
Sbjct: 61  NKYIKKCTLYVTLEPCIMCAGALFLSQIGRVVCGAPNNSIRGFS-----YSGIKLHPKTK 115

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
              GI + + + +IQ FF  +R
Sbjct: 116 FVSGIMKNQCKALIQKFFFFKR 137


>gi|218130011|ref|ZP_03458815.1| hypothetical protein BACEGG_01594 [Bacteroides eggerthii DSM 20697]
 gi|217987814|gb|EEC54140.1| hypothetical protein BACEGG_01594 [Bacteroides eggerthii DSM 20697]
          Length = 207

 Score =  153 bits (389), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 35/118 (29%), Positives = 55/118 (46%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
            +   +M  A++ +         P GAV V + ++I+   NR     D TAHAE+ AIR 
Sbjct: 53  DEDARYMRMAIDLSVENIDNGGGPFGAVIVRDGEVIATGVNRVVPNNDPTAHAEVNAIRN 112

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
            C+ L    L    +Y + EPC MC +A+  A ++R+ YG +      I+    F   
Sbjct: 113 ACQKLDTFQLEGCTVYSSCEPCPMCLSALYWAGVKRICYGNTKADAKAIDFDDSFIYD 170


>gi|261416951|ref|YP_003250634.1| CMP/dCMP deaminase zinc-binding protein [Fibrobacter succinogenes
           subsp. succinogenes S85]
 gi|261373407|gb|ACX76152.1| CMP/dCMP deaminase zinc-binding protein [Fibrobacter succinogenes
           subsp. succinogenes S85]
 gi|302327524|gb|ADL26725.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein
           [Fibrobacter succinogenes subsp. succinogenes S85]
          Length = 164

 Score =  153 bits (389), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 36/118 (30%), Positives = 56/118 (47%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
            +   FM  A++ + +       P GAV V + ++++   NR     D TAHAE+ AIR 
Sbjct: 10  DEDKRFMQMAIQLSVDNVDNGGGPFGAVIVKDGEVVATGANRVVPNNDPTAHAEVTAIRN 69

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
            C  L   +L    +Y + EPC MC +A+  AR++R+ Y  +      IE    F   
Sbjct: 70  ACAKLGTFMLDGCTVYTSCEPCPMCLSALYWARVKRICYANTKVDAAAIEFDDSFIYD 127


>gi|282859465|ref|ZP_06268570.1| guanine deaminase [Prevotella bivia JCVIHMP010]
 gi|282587693|gb|EFB92893.1| guanine deaminase [Prevotella bivia JCVIHMP010]
          Length = 168

 Score =  153 bits (389), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 42/143 (29%), Positives = 63/143 (44%), Gaps = 6/143 (4%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M K  + M  A+E + N+      P GAV   N +I++   N+     D TAHAE+  IR
Sbjct: 14  MTKEEL-MRRAIELSINSVRNGGGPFGAVIARNGEIVAEGSNKVTIDNDPTAHAEVSTIR 72

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
           M C+ L    L   ++Y + EPC MC  AI  A + ++YY         I     F    
Sbjct: 73  MACKKLDSFDLSGCEIYTSCEPCPMCLGAIYWAHLDKIYYANDRKDAANIGFDDDFIYQE 132

Query: 121 TCHHSPEIYPGISEQRSRQIIQD 143
                 E+ P   ++ S  ++Q 
Sbjct: 133 -----IEVQPQYRKKPSEILLQS 150


>gi|182416349|ref|YP_001821415.1| CMP/dCMP deaminase zinc-binding [Opitutus terrae PB90-1]
 gi|177843563|gb|ACB77815.1| CMP/dCMP deaminase zinc-binding [Opitutus terrae PB90-1]
          Length = 183

 Score =  153 bits (388), Expect = 7e-36,   Method: Composition-based stats.
 Identities = 38/113 (33%), Positives = 54/113 (47%), Gaps = 1/113 (0%)

Query: 5   NVFMSCALEEAQNAALRN-EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
             +M  A++ A +    +   P G V V   +I++R  NR     D TAHAE+ AIR   
Sbjct: 31  ETYMREAIQLADDGMRADRGGPFGCVIVRRGEIVARGQNRVTSTNDPTAHAEVTAIREAA 90

Query: 64  RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116
           + L    L + +LY + EPC MC +AI  ARI  +YY  +      I     F
Sbjct: 91  QRLGTFQLGDCELYTSCEPCPMCLSAIYWARIPTVYYANTRKDAAAIGFDDDF 143


>gi|189218057|ref|YP_001938699.1| Cytosine/adenosine deaminase [Methylacidiphilum infernorum V4]
 gi|189184915|gb|ACD82100.1| Cytosine/adenosine deaminase [Methylacidiphilum infernorum V4]
          Length = 168

 Score =  153 bits (388), Expect = 7e-36,   Method: Composition-based stats.
 Identities = 46/148 (31%), Positives = 67/148 (45%), Gaps = 6/148 (4%)

Query: 2   KKGNVFMSCALEEAQNAALRNEI-PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +K N ++  AL+ AQ  + + E  P GAV VL  + I  A N      D TAHAEILAI+
Sbjct: 13  EKHNYWLRLALKLAQYGSEQGEGGPFGAVVVLQEEAIGLAHNEVLSRLDPTAHAEILAIQ 72

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL- 119
              + +S   L    +Y + EPC MC +AI  A I ++YY        GI     F    
Sbjct: 73  RAAKKISHFDLEGSIIYTSCEPCPMCLSAIYWAGISKVYYACGKEDVQGIGFRDAFLYEE 132

Query: 120 ---ATCHHSPEIYPGISEQRSRQIIQDF 144
                C    +    +  +    I+Q++
Sbjct: 133 LGKPVCQRKIQAIQ-LLREEGIAILQNW 159


>gi|313203297|ref|YP_004041954.1| cmp/dcmp deaminase zinc-binding protein [Paludibacter
           propionicigenes WB4]
 gi|312442613|gb|ADQ78969.1| CMP/dCMP deaminase zinc-binding protein [Paludibacter
           propionicigenes WB4]
          Length = 156

 Score =  153 bits (388), Expect = 7e-36,   Method: Composition-based stats.
 Identities = 37/120 (30%), Positives = 50/120 (41%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M     FM  A+  +         P  AV V   KII+   NR     D TAHAE+ AIR
Sbjct: 1   MDSNKKFMRKAIALSLKNIENGGGPFAAVIVKEGKIIATGANRVTANTDPTAHAEVNAIR 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              + L    L   ++Y + EPC MC  A+  A + ++YYG +      I     F    
Sbjct: 61  KAAKKLGTFDLSGCEIYTSCEPCPMCLGAVYWAHLDKMYYGNTKADAKNIGFDDSFIYDE 120


>gi|215422331|ref|NP_001135855.1| adenosine deaminase, tRNA-specific 2, TAD2 homolog [Nasonia
           vitripennis]
          Length = 169

 Score =  153 bits (388), Expect = 8e-36,   Method: Composition-based stats.
 Identities = 43/146 (29%), Positives = 77/146 (52%), Gaps = 8/146 (5%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR------ 60
           +M  ALE+A+ +  + E+PVG + +  NKII+   N   E ++ T HAE+  I       
Sbjct: 6   WMDKALEKAEESLKKGEVPVGCLFLYENKIIATGSNTVNETRNATRHAELNCIDDVLVFC 65

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
                  +E+   +D+ VT+EPC MCAAA+   +IR + YG +N + GG ++  +   + 
Sbjct: 66  QKNNYNYKEVFKNIDVVVTVEPCIMCAAALHQLQIRSIIYGCANDRFGGCKSVYEVSKVY 125

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFK 146
                  +   +  + + Q+++DF+K
Sbjct: 126 ES--KINVVGNVKGEEAMQLLKDFYK 149


>gi|302383496|ref|YP_003819319.1| CMP/dCMP deaminase zinc-binding protein [Brevundimonas
           subvibrioides ATCC 15264]
 gi|302194124|gb|ADL01696.1| CMP/dCMP deaminase zinc-binding protein [Brevundimonas
           subvibrioides ATCC 15264]
          Length = 150

 Score =  153 bits (387), Expect = 9e-36,   Method: Composition-based stats.
 Identities = 54/130 (41%), Positives = 71/130 (54%), Gaps = 2/130 (1%)

Query: 22  NEIPVGAVAVLN--NKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVT 79
            E+PVGAV V      +++   N      D TAHAEI AIR          L  + LYVT
Sbjct: 15  GEVPVGAVIVDETTGTVVATGANAPISGHDPTAHAEIQAIRAAAAATGNYRLTGLTLYVT 74

Query: 80  LEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139
           LEPC MCA AIS ARI R+ +GA +PKGG + +G + +   T H  P I  G+    S +
Sbjct: 75  LEPCAMCAGAISHARIGRVVWGADDPKGGAVIHGPRLFDQPTLHSRPVIEGGVLADASAE 134

Query: 140 IIQDFFKERR 149
            ++ FF+ RR
Sbjct: 135 SLRAFFRARR 144


>gi|327261885|ref|XP_003215757.1| PREDICTED: tRNA-specific adenosine deaminase 2-like [Anolis
           carolinensis]
          Length = 160

 Score =  153 bits (387), Expect = 9e-36,   Method: Composition-based stats.
 Identities = 40/141 (28%), Positives = 69/141 (48%), Gaps = 8/141 (5%)

Query: 15  AQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQ------ 68
           A+ A    E+PVG + V NN++I +  N   E K+ T HAE++AI        +      
Sbjct: 3   AKEALENGEVPVGCLMVYNNEVIGKGKNEVNETKNATRHAEMVAIDQAIDWCHKQKKRME 62

Query: 69  EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL--ATCHHSP 126
           E+     LYVT+EPC MCAAA+ + +I  + YG  N + GG  +     +          
Sbjct: 63  EVFLHTVLYVTVEPCIMCAAALRMMKIPLVVYGCQNERFGGCGSVLNISSDTLTDTGEPF 122

Query: 127 EIYPGISEQRSRQIIQDFFKE 147
           +   G   + + ++++ F+++
Sbjct: 123 QCIAGYRSEEAVEMLKIFYRQ 143


>gi|303242511|ref|ZP_07328990.1| CMP/dCMP deaminase zinc-binding [Acetivibrio cellulolyticus CD2]
 gi|302589929|gb|EFL59698.1| CMP/dCMP deaminase zinc-binding [Acetivibrio cellulolyticus CD2]
          Length = 157

 Score =  153 bits (387), Expect = 9e-36,   Method: Composition-based stats.
 Identities = 42/120 (35%), Positives = 64/120 (53%), Gaps = 1/120 (0%)

Query: 1   MKKGNVFMSCALEEAQNAALRN-EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
           M+K + FM  A +EA          P GAV V +N II+RA N   +  D T HAE++AI
Sbjct: 1   MRKNSDFMKVAAQEAVEGVKSGHGGPFGAVIVKDNMIIARAHNEVIKNNDPTDHAEMIAI 60

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
           R   ++L +  L + +LY + EPC MC +AI  A+I +++YG +      I    ++   
Sbjct: 61  RSAAKMLERFDLSDCELYTSCEPCPMCFSAIHWAKIEKVFYGCTREDAASIGFDDKYIYD 120


>gi|332876785|ref|ZP_08444543.1| guanine deaminase [Capnocytophaga sp. oral taxon 329 str. F0087]
 gi|332685344|gb|EGJ58183.1| guanine deaminase [Capnocytophaga sp. oral taxon 329 str. F0087]
          Length = 155

 Score =  153 bits (387), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 40/137 (29%), Positives = 59/137 (43%), Gaps = 5/137 (3%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  A+E +         P GAV V  ++I++   NR     D TAHAE+ AIR  CR L
Sbjct: 6   FMRKAIELSVENVKNGGGPFGAVIVKGDEIVATGVNRVTAHNDPTAHAEVSAIREACRRL 65

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF----YTLATC 122
               L   ++Y + EPC MC  AI  A + ++YYG +      I     F      L   
Sbjct: 66  GTFDLSGCEIYTSCEPCPMCLGAIYWAHLDKIYYGNNKDDAADIGFDDSFIYEELALPRQ 125

Query: 123 HHSPEIYPGISEQRSRQ 139
           +    +   +  + +  
Sbjct: 126 NRKKAMEE-LLPEEAIA 141


>gi|329948029|ref|ZP_08294930.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Actinomyces sp. oral taxon 170 str. F0386]
 gi|328523168|gb|EGF50269.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Actinomyces sp. oral taxon 170 str. F0386]
          Length = 143

 Score =  153 bits (387), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 50/132 (37%), Positives = 66/132 (50%), Gaps = 1/132 (0%)

Query: 19  ALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLY 77
               E+PVGAV +     +++ A N      D TAHAEI A+R     L    L    L 
Sbjct: 12  GESGEVPVGAVVLSPEGTVLAEAANAREAQHDPTAHAEIRALRAAGAALGDSHLDGCTLV 71

Query: 78  VTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRS 137
           VTLEPCTMCA AI LAR+ RL  GA  P+ G   +       A  +H  E+  G+  + S
Sbjct: 72  VTLEPCTMCAGAIVLARVARLVLGAWEPRTGACGSVRDVVRDARANHQVEVRAGLRARES 131

Query: 138 RQIIQDFFKERR 149
           + ++  FF  RR
Sbjct: 132 QDLLTAFFSGRR 143


>gi|212693618|ref|ZP_03301746.1| hypothetical protein BACDOR_03136 [Bacteroides dorei DSM 17855]
 gi|237724217|ref|ZP_04554698.1| cytidine/deoxycytidylate deaminase [Bacteroides sp. D4]
 gi|212663871|gb|EEB24445.1| hypothetical protein BACDOR_03136 [Bacteroides dorei DSM 17855]
 gi|229437405|gb|EEO47482.1| cytidine/deoxycytidylate deaminase [Bacteroides dorei 5_1_36/D4]
          Length = 187

 Score =  153 bits (387), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 44/150 (29%), Positives = 64/150 (42%), Gaps = 10/150 (6%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           MKK  + M  A+E +         P GAV   + +II+   NR     D TAHAE+ AIR
Sbjct: 33  MKKEEL-MRKAIELSIENVANGGGPFGAVIAKDGEIIATGVNRVTSQCDPTAHAEVSAIR 91

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF-YTL 119
                L    L   ++Y + EPC MC  AI  AR+ ++YY  +      I     F Y  
Sbjct: 92  AAATKLGTFNLSGCEIYTSCEPCPMCLGAIYWARLDKMYYANNKTDAKNIGFDDSFIYDE 151

Query: 120 ATCHHSP-----EIYPGISEQRSRQIIQDF 144
            +   S      EI   +  + + +  Q +
Sbjct: 152 LSLKPSARKLPSEI---LLAEEAIKAFQQW 178


>gi|330995719|ref|ZP_08319617.1| guanine deaminase [Paraprevotella xylaniphila YIT 11841]
 gi|329574778|gb|EGG56339.1| guanine deaminase [Paraprevotella xylaniphila YIT 11841]
          Length = 155

 Score =  153 bits (387), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 39/111 (35%), Positives = 53/111 (47%)

Query: 6   VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
            FM  A+E +         P GAV V  ++I++   NR     D TAHAE+ AIR  CR 
Sbjct: 5   KFMRKAIELSVENVKNGGGPFGAVIVKGDEIVATGVNRVTAHNDPTAHAEVSAIREACRR 64

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116
           L    L   ++Y + EPC MC  AI  A + ++YYG +      I     F
Sbjct: 65  LGTFDLSGCEIYTSCEPCPMCLGAIYWAHLDKIYYGNNKDDAADIGFDDSF 115


>gi|303237160|ref|ZP_07323730.1| guanine deaminase [Prevotella disiens FB035-09AN]
 gi|302482547|gb|EFL45572.1| guanine deaminase [Prevotella disiens FB035-09AN]
          Length = 155

 Score =  152 bits (386), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 42/141 (29%), Positives = 59/141 (41%), Gaps = 5/141 (3%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
                M  A+E ++N+      P GAV   + +II+   NR     D TAHAE+  IR  
Sbjct: 2   TNEELMRRAIELSENSVRNGGGPFGAVIAKDGEIIAEGSNRVTIDNDPTAHAEVCTIRKA 61

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
           C  L    L    +Y + EPC MC  AI  A + ++YY       G I     F      
Sbjct: 62  CEKLGTFDLKGCVIYTSCEPCPMCFGAIYWAHLEKIYYANDRKDAGKIGFDDDFIYEE-- 119

Query: 123 HHSPEIYPGISEQRSRQIIQD 143
                I P   ++ S  I+Q+
Sbjct: 120 ---IAIEPQYRKKPSEIILQN 137


>gi|326385119|ref|ZP_08206788.1| cytidine/deoxycytidylate deaminase family protein [Gordonia
           neofelifaecis NRRL B-59395]
 gi|326196152|gb|EGD53357.1| cytidine/deoxycytidylate deaminase family protein [Gordonia
           neofelifaecis NRRL B-59395]
          Length = 154

 Score =  152 bits (386), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 49/128 (38%), Positives = 68/128 (53%), Gaps = 2/128 (1%)

Query: 24  IPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQ-EILPEVDLYVTLE 81
           +P+GAV    + + ++RA NR     D TAHAEILA+R           L +  L VT+E
Sbjct: 24  VPIGAVVFGPDGRELARAANRREADADPTAHAEILALRAAAARHGDGWRLSDCTLAVTVE 83

Query: 82  PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141
           PCTMCA AI LARI R+ +GA  PK G + +           + PE+  G+ E     ++
Sbjct: 84  PCTMCAGAIGLARISRVVFGAWEPKTGAVGSLWDVLRDPRQMYRPEVLAGVREDECAALV 143

Query: 142 QDFFKERR 149
           +DFF   R
Sbjct: 144 RDFFAAHR 151


>gi|88803350|ref|ZP_01118876.1| guanine deaminase [Polaribacter irgensii 23-P]
 gi|88780916|gb|EAR12095.1| guanine deaminase [Polaribacter irgensii 23-P]
          Length = 157

 Score =  152 bits (386), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 41/117 (35%), Positives = 56/117 (47%), Gaps = 1/117 (0%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEI-PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
           MK+   FMS A++ A      NE  P G + V +  II    N+     D TAHAE+ AI
Sbjct: 1   MKQHEEFMSAAVKAALKGMNNNEGGPFGCIIVKDGAIIGSGNNKVTSTNDPTAHAEVTAI 60

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116
           R  C+ +    L    +Y + EPC MC  AI  AR  ++YYG++      I     F
Sbjct: 61  RDACKNIGSFQLDGCIIYTSCEPCPMCLGAIYWARPDKVYYGSNQQDAANIGFDDAF 117


>gi|259415788|ref|ZP_05739708.1| cytidine and deoxycytidylate deaminase family protein [Silicibacter
           sp. TrichCH4B]
 gi|259347227|gb|EEW59004.1| cytidine and deoxycytidylate deaminase family protein [Silicibacter
           sp. TrichCH4B]
          Length = 150

 Score =  152 bits (386), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 71/130 (54%), Positives = 91/130 (70%), Gaps = 1/130 (0%)

Query: 21  RNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVT 79
           R E+PVGAV V    ++++RAGNR REL D TAHAE+L IR GC +L  E L   DLYVT
Sbjct: 20  RGEVPVGAVLVNPSGEVVARAGNRTRELNDPTAHAEVLVIRAGCAVLGSERLTGHDLYVT 79

Query: 80  LEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139
           LEPC MCAAAI+ AR+ R+YYGAS+PK GG+ +G   +     HH PE+Y G S  +S  
Sbjct: 80  LEPCAMCAAAIAAARVARVYYGASDPKSGGVAHGACVFDHPQAHHVPEVYDGFSASQSEA 139

Query: 140 IIQDFFKERR 149
           +++DFF +RR
Sbjct: 140 LLKDFFAKRR 149


>gi|195501916|ref|XP_002098000.1| GE10118 [Drosophila yakuba]
 gi|194184101|gb|EDW97712.1| GE10118 [Drosophila yakuba]
          Length = 160

 Score =  152 bits (386), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 45/147 (30%), Positives = 71/147 (48%), Gaps = 9/147 (6%)

Query: 6   VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
            FM  AL EA+ A    E+PVG V V   K+++R GN     ++ T HAE + I      
Sbjct: 3   AFMEEALVEARRARDAGEVPVGCVFVHGGKVVARGGNEVNVHRNATRHAEFICIDAILAS 62

Query: 66  LSQEILP------EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
             +  LP      E+ + VT+EPC MC+AA+    ++ + YG  N + GG    T     
Sbjct: 63  CRERRLPARQLFSEITVVVTVEPCIMCSAALHTLGVKEIIYGCENDRFGG---KTVVDVA 119

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFK 146
           A      +I  G+    +  ++++F+K
Sbjct: 120 AVVGQRIQITGGVRADEAMALLKEFYK 146


>gi|160938326|ref|ZP_02085681.1| hypothetical protein CLOBOL_03223 [Clostridium bolteae ATCC
           BAA-613]
 gi|158438699|gb|EDP16456.1| hypothetical protein CLOBOL_03223 [Clostridium bolteae ATCC
           BAA-613]
          Length = 155

 Score =  152 bits (385), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 44/155 (28%), Positives = 63/155 (40%), Gaps = 12/155 (7%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M    +FM  A+  +Q A      P GAV V + +II    N+     D T HAE   +R
Sbjct: 1   MMNDEIFMKEAIRLSQLAVSHGNEPFGAVLVKDGEIIFSNENQIYTGSDPTFHAEAGLLR 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASN--------PKGGGIEN 112
             C       L E  LY + EPC MC  A+   ++ RL YGAS+         KG     
Sbjct: 61  RFCAETHITDLREYTLYSSCEPCFMCCGAMVWTKLGRLVYGASDIDLCSILHEKGAECCK 120

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
                        P++  G+    S +I+  +F +
Sbjct: 121 IV----FEHSPWKPQVTSGVLRDESLKILTAYFSK 151


>gi|304383618|ref|ZP_07366077.1| guanine deaminase [Prevotella marshii DSM 16973]
 gi|304335142|gb|EFM01413.1| guanine deaminase [Prevotella marshii DSM 16973]
          Length = 155

 Score =  152 bits (385), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 38/120 (31%), Positives = 54/120 (45%), Gaps = 1/120 (0%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           MKK  + M  A+  ++ +      P GAV   + +II+   N   +  D TAHAE+ AIR
Sbjct: 1   MKKEEL-MRKAIALSEESVKNGGGPFGAVIAKDGEIIAEGANSVTKDHDPTAHAEVNAIR 59

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              R L    L   ++Y + EPC MC  AI  A + ++YY         I     F  L 
Sbjct: 60  KASRKLGTFDLSGCEIYTSCEPCPMCLGAIYWAHLDKIYYANDRKDAARIGFDDDFIYLE 119


>gi|332028253|gb|EGI68300.1| tRNA-specific adenosine deaminase 2 [Acromyrmex echinatior]
          Length = 175

 Score =  152 bits (385), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 40/150 (26%), Positives = 74/150 (49%), Gaps = 8/150 (5%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
             + +M  AL++A+ +    E+PVG + + NN+II+   N   E  + T HAEI  I   
Sbjct: 2   DTSAWMDVALQKAEESLKAGEVPVGCLFIYNNQIIATGNNTVNETCNATRHAEINCIDQV 61

Query: 63  CRILSQE------ILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116
            +   ++      +   +D+ VT+EPC MC +A+   +I  + YG +N + GG  +  + 
Sbjct: 62  LKFCKEKSMDYEMVFRNLDVIVTVEPCIMCMSALLQLQIHSIVYGCANDRFGGCISVLEV 121

Query: 117 YTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
                      I   +  + + +++QDF+K
Sbjct: 122 PKFYDS--KIIIQGNVKGEEAMRLLQDFYK 149


>gi|268575234|ref|XP_002642596.1| Hypothetical protein CBG09150 [Caenorhabditis briggsae]
 gi|187032061|emb|CAP28830.1| hypothetical protein CBG_09150 [Caenorhabditis briggsae AF16]
          Length = 153

 Score =  152 bits (385), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 40/110 (36%), Positives = 56/110 (50%), Gaps = 1/110 (0%)

Query: 7   FMSCALEEAQNAALRNEI-PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           FM  A+EEA+   +  +  P GAV V + K+I    N     KD TAHAE+ AIR  C+ 
Sbjct: 3   FMKLAIEEAKKGMVAGDGGPFGAVIVKDGKVIGSGHNMVLVTKDPTAHAEVTAIRNTCKN 62

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
           +    L    LY +  PC MC  A   +R+  +YYGA++ +   I  G  
Sbjct: 63  VDSFDLSGCQLYTSCYPCPMCMGAALWSRVDAIYYGATSSEAAEIGFGDH 112


>gi|170782870|ref|YP_001711204.1| tRNA-specific adenosine deaminase [Clavibacter michiganensis subsp.
           sepedonicus]
 gi|169157440|emb|CAQ02629.1| tRNA-specific adenosine deaminase [Clavibacter michiganensis subsp.
           sepedonicus]
          Length = 158

 Score =  152 bits (385), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 39/113 (34%), Positives = 53/113 (46%)

Query: 37  ISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIR 96
           I R  N     +D TAHAE+ A+R          L    L VTLEPC MCA AI  AR+ 
Sbjct: 43  IGRGRNLREARQDPTAHAEVEALRAAAEATGDRHLVGATLVVTLEPCVMCAGAILAARVP 102

Query: 97  RLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
           R+ +GA + K G   +           H  E++ G+       ++ DFF +RR
Sbjct: 103 RVVFGAWDEKAGAAGSLYDVLRDRRLPHRAEVFAGVLAAECAAVLDDFFADRR 155


>gi|300727400|ref|ZP_07060809.1| cytidine/deoxycytidylate deaminase family protein [Prevotella
           bryantii B14]
 gi|299775280|gb|EFI71879.1| cytidine/deoxycytidylate deaminase family protein [Prevotella
           bryantii B14]
          Length = 155

 Score =  152 bits (385), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 40/116 (34%), Positives = 55/116 (47%), Gaps = 1/116 (0%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M+K + FM  A+  ++N+      P GAV V + +I++ A N      D TAHAEI  IR
Sbjct: 1   MEKKD-FMRRAIALSENSVKTGGGPFGAVIVKDGEIVAEASNSVTIDNDPTAHAEINCIR 59

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116
              +IL    L   D+Y + EPC MC  AI  A +  +YY         I     F
Sbjct: 60  KATKILKSFDLAGCDIYTSCEPCPMCLGAIYWAHLDHIYYANDRKDAAKIGFDDDF 115


>gi|328950667|ref|YP_004368002.1| tRNA(Ile)-lysidine synthase [Marinithermus hydrothermalis DSM
           14884]
 gi|328450991|gb|AEB11892.1| tRNA(Ile)-lysidine synthase [Marinithermus hydrothermalis DSM
           14884]
          Length = 528

 Score =  152 bits (385), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 53/147 (36%), Positives = 79/147 (53%), Gaps = 7/147 (4%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
             + +M  AL  A+ AA + E+P+GAV V +  +++ A N     +D TAHAE+LA+R  
Sbjct: 383 DEDRYMRRALVLARAAARQGEVPIGAVLVRDGAVLAEAANAVEASRDATAHAELLALRTA 442

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
            R + +++LP   LYVTLEPC MC  AI  AR+ R+ YG  N K G        +T+   
Sbjct: 443 LRRVGEKVLPGATLYVTLEPCPMCYGAILEARVARVVYGVENLKAGA-------FTVHGL 495

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKERR 149
                +  G  E    ++++DFF   R
Sbjct: 496 EPRVALEAGRVEGECAKVLKDFFARLR 522


>gi|150004479|ref|YP_001299223.1| cytidine/deoxycytidylate deaminase [Bacteroides vulgatus ATCC 8482]
 gi|254882789|ref|ZP_05255499.1| cytidine/deoxycytidylate deaminase [Bacteroides sp. 4_3_47FAA]
 gi|294778238|ref|ZP_06743664.1| guanine deaminase [Bacteroides vulgatus PC510]
 gi|319643895|ref|ZP_07998478.1| cytidine/deoxycytidylate deaminase [Bacteroides sp. 3_1_40A]
 gi|149932903|gb|ABR39601.1| cytidine/deoxycytidylate deaminase [Bacteroides vulgatus ATCC 8482]
 gi|254835582|gb|EET15891.1| cytidine/deoxycytidylate deaminase [Bacteroides sp. 4_3_47FAA]
 gi|294447866|gb|EFG16440.1| guanine deaminase [Bacteroides vulgatus PC510]
 gi|317384512|gb|EFV65478.1| cytidine/deoxycytidylate deaminase [Bacteroides sp. 3_1_40A]
          Length = 155

 Score =  152 bits (385), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 43/150 (28%), Positives = 64/150 (42%), Gaps = 10/150 (6%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           MKK  + M  A+E +         P GAV   + +II+   NR     D TAHAE+ AIR
Sbjct: 1   MKKEEL-MRKAIELSIENVANGGGPFGAVIAKDGEIIATGANRVTSQCDPTAHAEVSAIR 59

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF-YTL 119
                L    L   ++Y + EPC MC  AI  AR+ ++YY  +      I     F Y  
Sbjct: 60  AAASKLGTFNLSGCEIYTSCEPCPMCLGAIYWARLDKMYYANNKTDAKNIGFDDSFIYDE 119

Query: 120 ATCHHSP-----EIYPGISEQRSRQIIQDF 144
            +   S      E+   +  + + +  Q +
Sbjct: 120 LSLKPSARKLPSEV---LLAEEAIKAFQQW 146


>gi|145345338|ref|XP_001417171.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144577398|gb|ABO95464.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 170

 Score =  152 bits (385), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 49/158 (31%), Positives = 74/158 (46%), Gaps = 16/158 (10%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVL--NNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M  AL  A +A  + E+P+ AV V     ++++ A NR     D TAHAE+L IR+G   
Sbjct: 1   MRRALALALDAGSQGEVPIAAVLVDATTGEVVAEAANRCERDGDPTAHAEMLLIRLGAEK 60

Query: 66  LSQEI-LPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA---- 120
           L     L    +YVTLEPC MCA AI  +R+  + YGA N   G   +            
Sbjct: 61  LGGWRHLKRTRMYVTLEPCAMCAGAILQSRVGGVTYGARNALLGADGSWAALLRNEDVGG 120

Query: 121 ------TCHHSP---EIYPGISEQRSRQIIQDFFKERR 149
                   H      ++  G+  + + + +++FF+ RR
Sbjct: 121 SERAPVRAHPFTPDLDVKGGVLAEETGEAMREFFRRRR 158


>gi|291521867|emb|CBK80160.1| Cytosine/adenosine deaminases [Coprococcus catus GD/7]
          Length = 175

 Score =  151 bits (384), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 46/149 (30%), Positives = 66/149 (44%), Gaps = 6/149 (4%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
            +   FM  A+  +Q A      P GAV V N +I+    N+     D T H E   IR 
Sbjct: 22  TEDASFMREAIRLSQLAVEHGNEPFGAVLVKNGEIVFTNENQIYTRHDPTFHGEAGLIRE 81

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI-----ENGTQF 116
            C   S   L +  LY + EPC MC+ A+   ++ RL YGASN     I      N ++ 
Sbjct: 82  FCAKTSITDLHDYTLYSSCEPCFMCSGAMVWVKLGRLVYGASNSDLEAILGNEGCNCSKI 141

Query: 117 YTLATCHHSPEIYPGISEQRSRQIIQDFF 145
               +    P++  GI    S  I++D+F
Sbjct: 142 VFDNSF-WQPQVTAGILRAESLMILKDYF 169


>gi|282878399|ref|ZP_06287187.1| guanine deaminase [Prevotella buccalis ATCC 35310]
 gi|281299477|gb|EFA91858.1| guanine deaminase [Prevotella buccalis ATCC 35310]
          Length = 155

 Score =  151 bits (384), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 41/145 (28%), Positives = 62/145 (42%), Gaps = 10/145 (6%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M + ++ M  A+  ++ +      P GAV   + +II+ A N      D TAHAE+ AIR
Sbjct: 1   MNQQDI-MRRAIALSEKSVRTGGGPFGAVIAKDGEIIAEASNTVTLDHDPTAHAEVNAIR 59

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF---- 116
                L    L   D+Y + EPC MC  AI  A + R+YY  +      I     F    
Sbjct: 60  QAAHKLGTFDLTGCDIYTSCEPCPMCLGAIYWAHLDRIYYANNRKDAARIGFDDDFIYHE 119

Query: 117 --YTLATCHHSPEIYPGISEQRSRQ 139
                A  H   +I   +  + +R+
Sbjct: 120 IALQPADRHKQMQI---LLPEEARK 141


>gi|324529700|gb|ADY49034.1| Guanine deaminase [Ascaris suum]
          Length = 153

 Score =  151 bits (384), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 39/131 (29%), Positives = 56/131 (42%), Gaps = 4/131 (3%)

Query: 7   FMSCALEEAQNAALRNEI-PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           FM  A++EA       +  P GAV V NN II+   N   +  D TAHAEI AIR  C  
Sbjct: 3   FMRKAIDEACQGVDNGDGGPFGAVIVRNNSIIATGHNMVLKTNDPTAHAEITAIRNACSA 62

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           L    L    LY +  PC MC  A   +R+  +YY  +      +    + +     +  
Sbjct: 63  LGTFDLSGCQLYTSCYPCPMCMGAALWSRVNAIYYATTPEDAEAVGFDDKAFYEFLKNP- 121

Query: 126 PEIYPGISEQR 136
             +  G+ +  
Sbjct: 122 --VSDGVRKVE 130


>gi|325856346|ref|ZP_08172062.1| guanine deaminase [Prevotella denticola CRIS 18C-A]
 gi|327312522|ref|YP_004327959.1| guanine deaminase [Prevotella denticola F0289]
 gi|325483530|gb|EGC86502.1| guanine deaminase [Prevotella denticola CRIS 18C-A]
 gi|326944415|gb|AEA20300.1| guanine deaminase [Prevotella denticola F0289]
          Length = 155

 Score =  151 bits (384), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 41/143 (28%), Positives = 64/143 (44%), Gaps = 6/143 (4%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M K  + M  A+E + ++      P GAV   N +II+   N      D TAHAE+  IR
Sbjct: 1   MTKEEL-MRRAIELSADSVRNGGGPFGAVIARNGEIIAEGSNGVTIYNDPTAHAEVSTIR 59

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
             C+ L+   L   ++Y + EPC MC  AI  A + ++YY        GI     F    
Sbjct: 60  KACQKLNTFDLTGCEIYTSCEPCPMCLGAIYWAHLDKIYYANDRKDAAGIGFDDDFIYQE 119

Query: 121 TCHHSPEIYPGISEQRSRQIIQD 143
                 E+ P   ++ S  ++++
Sbjct: 120 -----IELKPQYRKKPSEILLRN 137


>gi|317051257|ref|YP_004112373.1| CMP/dCMP deaminase zinc-binding protein [Desulfurispirillum indicum
           S5]
 gi|316946341|gb|ADU65817.1| CMP/dCMP deaminase zinc-binding protein [Desulfurispirillum indicum
           S5]
          Length = 157

 Score =  151 bits (384), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 43/132 (32%), Positives = 60/132 (45%), Gaps = 2/132 (1%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEI-PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
           M    V+M  A+  A+      +  P GAV V   +++ R  N      D TAHAEI+AI
Sbjct: 1   MSDHRVYMEQAIAMARQNIDSGDGGPFGAVIVREGQVVGRGRNGVTSSLDPTAHAEIVAI 60

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF-YT 118
           R  C  L    L + D+Y + EPC MC  AI  AR+R +YY A+      +    +F Y 
Sbjct: 61  RDACANLKTFHLEDCDIYTSCEPCPMCLGAIYWARLRAIYYAANRQDAARVNFSDEFIYE 120

Query: 119 LATCHHSPEIYP 130
                    + P
Sbjct: 121 QIGVDPRFRVIP 132


>gi|325838575|ref|ZP_08166576.1| guanine deaminase [Turicibacter sp. HGF1]
 gi|325490801|gb|EGC93104.1| guanine deaminase [Turicibacter sp. HGF1]
          Length = 154

 Score =  151 bits (384), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 42/116 (36%), Positives = 62/116 (53%), Gaps = 1/116 (0%)

Query: 5   NVFMSCALEEAQNAAL-RNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
             +M  A+EEA+N    ++  P GAV V +N++I++A N   +  D T HAEI AIR+  
Sbjct: 2   EKYMKMAIEEAENGVKCKHGGPFGAVIVKDNQVIAKAHNTVVKENDPTCHAEINAIRLAS 61

Query: 64  RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
           R L+   L +  L+ + EPC MC +AI  A I  +YYG +      I    +F   
Sbjct: 62  RTLNTFKLNDCLLFTSSEPCPMCLSAILWAGIETVYYGCTVEDANKIGFADEFIYD 117


>gi|332707396|ref|ZP_08427446.1| cytosine/adenosine deaminase [Lyngbya majuscula 3L]
 gi|332353887|gb|EGJ33377.1| cytosine/adenosine deaminase [Lyngbya majuscula 3L]
          Length = 150

 Score =  151 bits (384), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 42/142 (29%), Positives = 65/142 (45%), Gaps = 9/142 (6%)

Query: 8   MSCALEEAQNAALRN-EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M+ A+  +  +       P GAV V + +II++A N+     D TAHAEI+AIR  C++L
Sbjct: 1   MNEAIALSVISVRSGKGGPFGAVVVKDGEIIAKAHNQVTSTNDPTAHAEIVAIRDACKVL 60

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF----YTLATC 122
               L   +LY + EPC MC  AI  AR+ ++YY  +      I    +F      L   
Sbjct: 61  QTFQLTGCELYTSCEPCPMCLGAIYWARLDKVYYANTKADAAQIGFDDKFIYEELDLPIS 120

Query: 123 HHSPEIYPGISEQRSRQIIQDF 144
                I   +    +   ++ F
Sbjct: 121 DRKLPIIQ-LMPDEA---LRAF 138


>gi|301096603|ref|XP_002897398.1| tRNA-specific adenosine deaminase, putative [Phytophthora infestans
           T30-4]
 gi|262107089|gb|EEY65141.1| tRNA-specific adenosine deaminase, putative [Phytophthora infestans
           T30-4]
          Length = 130

 Score =  151 bits (383), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 47/125 (37%), Positives = 66/125 (52%), Gaps = 3/125 (2%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           + +   FM  AL E + A +R E+PVG V V   +II+ A NR  EL + T HAEI+AI 
Sbjct: 3   IDEHEHFMREALLEGERALIRAEVPVGCVFVHKGEIIASASNRVNELCNATMHAEIVAIE 62

Query: 61  MGCRILSQ---EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFY 117
                      E+L +  LYVT EPC MCA A++   I+R+Y+G  N + GG  +    +
Sbjct: 63  AIAAKYGDKACEVLADCTLYVTCEPCIMCAGALAHVSIKRVYFGCHNDRFGGCSSVLNLH 122

Query: 118 TLATC 122
                
Sbjct: 123 ERRCL 127


>gi|21228824|ref|NP_634746.1| hypothetical protein MM_2722 [Methanosarcina mazei Go1]
 gi|20907345|gb|AAM32418.1| hypothetical protein MM_2722 [Methanosarcina mazei Go1]
          Length = 161

 Score =  151 bits (383), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 40/146 (27%), Positives = 67/146 (45%), Gaps = 3/146 (2%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           +K  + +  A+E +  +  R   P GAV V N KI+S + N+     D TAHAEI AIR 
Sbjct: 7   EKDLLLIRRAIELSLESVKRGGGPFGAVIVKNGKIVSESYNQVTLHNDPTAHAEIGAIRE 66

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL-- 119
             R L+   L    +Y++ EPC MC  AI  ARI ++++ ++      I     F     
Sbjct: 67  AARKLNTFDLSGCSIYISCEPCPMCLGAIYWARIDKVFFASTRSDAENIGFDDSFIYEEI 126

Query: 120 -ATCHHSPEIYPGISEQRSRQIIQDF 144
               +     +  +  + + +  + +
Sbjct: 127 SRPMNERKIDFKQLLREEALEAFRAW 152


>gi|255017439|ref|ZP_05289565.1| tRNA-specific adenosine deaminase [Listeria monocytogenes FSL
           F2-515]
          Length = 109

 Score =  151 bits (383), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 39/101 (38%), Positives = 60/101 (59%)

Query: 49  DVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGG 108
           +   HAE+LAI+  C+  +   L   +LYVTLEPC MC+ AI L+RI ++YYGA +PK G
Sbjct: 1   NAVTHAELLAIQDACKHQNSWRLSGAELYVTLEPCPMCSGAILLSRIEKVYYGAKDPKAG 60

Query: 109 GIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
              +          +H+ E+  G+ E  S ++++ FF+E R
Sbjct: 61  TAGSLMNLLQDDRFNHTCEVEAGLMESESSEMLKSFFQELR 101


>gi|241617471|ref|XP_002406922.1| tRNA-specific adenosine deaminase, putative [Ixodes scapularis]
 gi|215500893|gb|EEC10387.1| tRNA-specific adenosine deaminase, putative [Ixodes scapularis]
          Length = 188

 Score =  151 bits (383), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 37/149 (24%), Positives = 69/149 (46%), Gaps = 8/149 (5%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
             +  M    + A+ A    E+PVG V     ++I+R  NR  + K+   HAE+  +   
Sbjct: 20  DDDNGMDACFQLAEEALAAGEVPVGCVMFYAGQVIARGRNRVNKTKNACRHAEMDCVDQV 79

Query: 63  CRILS------QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116
               +       E+   V ++VT+EPC MCAAA+   R+ R+ +G  N + GG+ +    
Sbjct: 80  LDWCAERGLDTGEVFRGVSVFVTVEPCIMCAAALDSLRVSRVVFGCPNERFGGVGSVLDV 139

Query: 117 YTLATCHHSPEIYPGISEQRSRQIIQDFF 145
                      +  G+  +R+  ++++F+
Sbjct: 140 LR--GTGGRTVVVAGVRAERAVNLLKEFY 166


>gi|224536998|ref|ZP_03677537.1| hypothetical protein BACCELL_01874 [Bacteroides cellulosilyticus
           DSM 14838]
 gi|224521365|gb|EEF90470.1| hypothetical protein BACCELL_01874 [Bacteroides cellulosilyticus
           DSM 14838]
          Length = 188

 Score =  151 bits (383), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 39/112 (34%), Positives = 50/112 (44%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
              M  A+  A+        P GAV   N +II+   NR     D TAHAE+ AIR  C+
Sbjct: 37  EELMRKAIVLAEENVDNGGGPFGAVIARNGEIIATGVNRVTAEHDPTAHAEVSAIRAACK 96

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116
            L    L   ++Y + EPC MC  AI  A I ++YYG        I     F
Sbjct: 97  KLGTFDLSGCEIYTSCEPCPMCLGAIYWAHIDKMYYGNDKADAKRIGFDDSF 148


>gi|21673423|ref|NP_661488.1| cytosine deaminase [Chlorobium tepidum TLS]
 gi|21646524|gb|AAM71830.1| cytosine deaminase [Chlorobium tepidum TLS]
          Length = 148

 Score =  151 bits (383), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 45/149 (30%), Positives = 65/149 (43%), Gaps = 14/149 (9%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M + + FM+ ALE+A+ +     +PVGAV V N K+++   N+  +  D  AH E+  IR
Sbjct: 1   MNRDHEFMALALEQARKSYDEGGVPVGAVMVENGKVLAAGHNQRVQQGDPIAHGEMDCIR 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              R         V LY TL PC MCA AI    I R+  G      G      +     
Sbjct: 61  KAGRCA---RYDTVTLYTTLSPCMMCAGAIVQFGIGRVVVGEDRNFKGNAGFLRE----- 112

Query: 121 TCHHSPEIYPGISEQR-SRQIIQDFFKER 148
              H  E+   + +    R ++  F  ER
Sbjct: 113 ---HGVEVS--LLDDEGCRSLMDAFIAER 136


>gi|224087290|ref|XP_002308113.1| predicted protein [Populus trichocarpa]
 gi|222854089|gb|EEE91636.1| predicted protein [Populus trichocarpa]
          Length = 155

 Score =  151 bits (383), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 45/121 (37%), Positives = 66/121 (54%), Gaps = 9/121 (7%)

Query: 6   VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
            FM  A+E+A++A    E+PVG V V + K+I+   NR  E ++ T HAE+ AI +    
Sbjct: 15  AFMELAIEQAEDALNSLEVPVGCVIVEDGKVIASGRNRTTETRNATRHAEMEAIDVLLEQ 74

Query: 66  LSQ---------EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116
             +         E +    LYVT EPC MCAAA+S+  I+ +YYG +N K GG  +    
Sbjct: 75  WQKIGLSVSEVAEKISTCSLYVTCEPCIMCAAALSILGIKEVYYGCANDKFGGCGSILSL 134

Query: 117 Y 117
           +
Sbjct: 135 H 135


>gi|71907361|ref|YP_284948.1| cytidine/deoxycytidylate deaminase, zinc-binding region
           [Dechloromonas aromatica RCB]
 gi|71846982|gb|AAZ46478.1| Cytidine/deoxycytidylate deaminase, zinc-binding region
           [Dechloromonas aromatica RCB]
          Length = 157

 Score =  151 bits (383), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 42/135 (31%), Positives = 58/135 (42%), Gaps = 2/135 (1%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEI-PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
           M   + F++ A+E A+  +   E  P GAV V + +II+   NR     D TAHAEI AI
Sbjct: 1   MNPDDQFLARAIELARQGSESGEGGPFGAVIVRDGRIIAEGWNRVVASHDPTAHAEIGAI 60

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
           R  C       L    LY + EPC MC +A   ARI R+ +  S  +   I         
Sbjct: 61  RTACAGQDHFHLHGCTLYASSEPCPMCLSAAYWARIERIVFANSRAEAAAIGFCDDELYS 120

Query: 120 ATCHHSPEIYPGISE 134
              +        + E
Sbjct: 121 E-LNRHFSARSIVME 134


>gi|91201071|emb|CAJ74129.1| strongly similar to fungal cytosine deaminase [Candidatus Kuenenia
           stuttgartiensis]
          Length = 145

 Score =  151 bits (383), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 46/143 (32%), Positives = 70/143 (48%), Gaps = 12/143 (8%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           + FM  A+EEA+   L   IP+G+V V + +II R  N+  +  +  AHAEI  +    R
Sbjct: 2   DRFMRTAIEEAKQGLLEGGIPIGSVLVKDGEIIGRGHNKRVQENNPIAHAEIDCLVNSGR 61

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
           +          LY TL PC +CA AI   RI+++  G S    G  E    F  L    H
Sbjct: 62  VGK---YSGTTLYSTLMPCYLCAGAIVQFRIKKIVVGESETFSGAKE----FMEL----H 110

Query: 125 SPEIYPGISEQRSRQIIQDFFKE 147
             EI   ++ +  +Q+++DF + 
Sbjct: 111 GVEIID-LNIEECKQLMKDFIQN 132


>gi|311067822|ref|YP_003972745.1| guanine deaminase [Bacillus atrophaeus 1942]
 gi|310868339|gb|ADP31814.1| guanine deaminase [Bacillus atrophaeus 1942]
          Length = 156

 Score =  151 bits (382), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 40/119 (33%), Positives = 51/119 (42%), Gaps = 1/119 (0%)

Query: 3   KGNVFMSCALEEAQNAALRN-EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
             N F+  A+E A          P GAV V + KII+   N      D TAHAE+ AIR 
Sbjct: 2   NHNEFLQRAVELATEGVNAGIGGPFGAVIVKDGKIIAEGQNNVTTSNDPTAHAEVTAIRN 61

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
            C  L    L +  LY + EPC MC  AI  AR + +YY + +           F    
Sbjct: 62  ACEALGSYQLDDCILYTSCEPCPMCLGAIYWARPKAVYYASEHTDAANAGFDDSFIYDE 120


>gi|308803957|ref|XP_003079291.1| Cytosine deaminase FCY1 and related enzymes (ISS) [Ostreococcus
           tauri]
 gi|116057746|emb|CAL53949.1| Cytosine deaminase FCY1 and related enzymes (ISS) [Ostreococcus
           tauri]
          Length = 205

 Score =  151 bits (382), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 47/154 (30%), Positives = 71/154 (46%), Gaps = 12/154 (7%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
               M  AL EA+ A    E+P G   V + +I++R  N     ++ T HAE  A+    
Sbjct: 27  DRAHMREALREARRALDAWEVPCGCALVRDGEIVARGRNATNRTRNGTRHAEFEAVDALL 86

Query: 64  RILSQEI----LPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT- 118
           R    ++      E+ LYVT EPC MCA A+S   +RR+ YG +N K GG       +  
Sbjct: 87  RAHDGDVDACGFEEMTLYVTCEPCVMCAGAMSALGVRRVVYGCANDKFGGNGTVLDVHDS 146

Query: 119 -------LATCHHSPEIYPGISEQRSRQIIQDFF 145
                  + T   + E   G+ E  + ++ QDF+
Sbjct: 147 GCGRCDGVGTKGATYESVGGLFETEAIRLFQDFY 180


>gi|89097617|ref|ZP_01170506.1| guanine deaminase [Bacillus sp. NRRL B-14911]
 gi|89087913|gb|EAR67025.1| guanine deaminase [Bacillus sp. NRRL B-14911]
          Length = 159

 Score =  151 bits (382), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 43/112 (38%), Positives = 54/112 (48%), Gaps = 1/112 (0%)

Query: 6   VFMSCALEEA-QNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
            FM  A+E A +NAA     P GAV V +  +I    NR   L D TAHAEI AIR  C 
Sbjct: 8   YFMENAVEAALENAAAHLGGPFGAVVVKDGTVIGTGTNRVTSLNDPTAHAEIQAIRAACL 67

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116
            L    L   ++Y + EPC MC  AI  AR + +Y+  +           QF
Sbjct: 68  HLQDFQLSGCEIYTSCEPCPMCFGAIYWARPKAVYFACTKEDAAAAGFDDQF 119


>gi|293375825|ref|ZP_06622095.1| putative guanine deaminase [Turicibacter sanguinis PC909]
 gi|292645602|gb|EFF63642.1| putative guanine deaminase [Turicibacter sanguinis PC909]
          Length = 154

 Score =  151 bits (382), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 42/113 (37%), Positives = 62/113 (54%), Gaps = 1/113 (0%)

Query: 5   NVFMSCALEEAQNAAL-RNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
             +M  A+EEA+N    ++  P GAV V +N++I++A N   +  D T HAEI AIR+  
Sbjct: 2   EKYMKMAIEEAENGVKCKHGGPFGAVIVKDNQVIAKAHNTVVKENDPTCHAEINAIRLAS 61

Query: 64  RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116
           R L+   L +  L+ + EPC MC +AI  A I  +YYG +      I    +F
Sbjct: 62  RTLNTFKLNDCLLFTSSEPCPMCLSAILWAGIETVYYGCTVEDANKIGFADEF 114


>gi|315647606|ref|ZP_07900708.1| CMP/dCMP deaminase zinc-binding protein [Paenibacillus vortex V453]
 gi|315277045|gb|EFU40386.1| CMP/dCMP deaminase zinc-binding protein [Paenibacillus vortex V453]
          Length = 159

 Score =  151 bits (382), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 38/119 (31%), Positives = 51/119 (42%), Gaps = 1/119 (0%)

Query: 3   KGNVFMSCALEEAQNAALR-NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
               +M  A+EEA          P GA+ V   K+I R  N    L D TAHAE+ AIR 
Sbjct: 5   NHEYWMQIAIEEAHQNVQNVEGGPFGAIVVKEGKVIGRGRNLVTALNDPTAHAEVQAIRE 64

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
            C  +    L    +Y + EPC MC  AI  +R   +YY ++  +   I     F    
Sbjct: 65  ACLHMEDFQLKGCTIYTSCEPCPMCLGAIYWSRPDAVYYASTKKEAAEIGFDDHFIYDE 123


>gi|220907233|ref|YP_002482544.1| CMP/dCMP deaminase [Cyanothece sp. PCC 7425]
 gi|219863844|gb|ACL44183.1| CMP/dCMP deaminase zinc-binding [Cyanothece sp. PCC 7425]
          Length = 144

 Score =  151 bits (382), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 42/144 (29%), Positives = 66/144 (45%), Gaps = 12/144 (8%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           + FM  A+ EA+       IP+G+V V N +II R  N+  +  +   HAEI  ++   R
Sbjct: 2   DQFMQAAIAEARTGLQEGGIPIGSVLVKNGEIIGRGHNQRVQQGNPIIHAEIDCLQQAGR 61

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
           I       +  LY TL PC +CA A+    I+++  G S    G  E            H
Sbjct: 62  IG---RYQDTTLYSTLMPCYLCAGAVVQFGIKKVIAGESYTFPGAREFMES--------H 110

Query: 125 SPEIYPGISEQRSRQIIQDFFKER 148
             E+   +  Q  +Q++QDF + +
Sbjct: 111 GVEVID-LDLQECKQLMQDFIQAK 133


>gi|126732068|ref|ZP_01747870.1| cytidine and deoxycytidylate deaminase family protein [Sagittula
           stellata E-37]
 gi|126707357|gb|EBA06421.1| cytidine and deoxycytidylate deaminase family protein [Sagittula
           stellata E-37]
          Length = 149

 Score =  150 bits (381), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 61/116 (52%), Positives = 81/116 (69%)

Query: 34  NKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLA 93
             +++RAGNR REL D TAHAE+LA+R  C     + LP  DLYVTLEPC MCAAAIS A
Sbjct: 34  GAVVARAGNRTRELSDPTAHAEMLALRAACAAAGSDRLPGHDLYVTLEPCPMCAAAISFA 93

Query: 94  RIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
           R+ R+YYGA++PK GG+  G + ++   CHH PE+Y GI  + +  ++  FF+ERR
Sbjct: 94  RVARVYYGAADPKSGGVAQGPRVFSHPQCHHVPEVYDGIGAEAASALLTGFFRERR 149


>gi|261188113|ref|XP_002620473.1| tRNA-specific adenosine-34 deaminase subunit Tad2p/ADAT2
           [Ajellomyces dermatitidis SLH14081]
 gi|239593348|gb|EEQ75929.1| tRNA-specific adenosine-34 deaminase subunit Tad2p/ADAT2
           [Ajellomyces dermatitidis SLH14081]
 gi|239609090|gb|EEQ86077.1| tRNA-specific adenosine-34 deaminase subunit Tad2p/ADAT2
           [Ajellomyces dermatitidis ER-3]
          Length = 187

 Score =  150 bits (381), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 42/148 (28%), Positives = 70/148 (47%), Gaps = 13/148 (8%)

Query: 13  EEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILP 72
           E+ + A    E PVG V V N+++I    N   +  + T HAE LAI    R   + I  
Sbjct: 3   EKGEEALASGETPVGCVLVHNDEVIGSGMNDTNKSMNGTRHAEFLAIEEVLRSHPRSIFR 62

Query: 73  EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL------------- 119
           E DLYVT+EPC MCA+A+   +IR +Y+G +N + GG     + ++              
Sbjct: 63  ETDLYVTVEPCIMCASALRQYQIRHVYFGCANERFGGTGGVLKLHSEKSLLKLPGIISGS 122

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKE 147
                   +  G+  + +  +++ F+ +
Sbjct: 123 PGIDPPYGLTGGLFRKEAIMLLRRFYIQ 150


>gi|226310134|ref|YP_002770028.1| guanine deaminase [Brevibacillus brevis NBRC 100599]
 gi|226093082|dbj|BAH41524.1| guanine deaminase [Brevibacillus brevis NBRC 100599]
          Length = 156

 Score =  150 bits (381), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 43/128 (33%), Positives = 60/128 (46%), Gaps = 2/128 (1%)

Query: 1   MKKGNVFMSCALEEA-QNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
           M++   +M  A++ A +N   +   P GA+ V + +++ R  N      D TAHAEI AI
Sbjct: 1   MER-ETWMGQAVQIAFENVRDKVGGPFGALVVKDGQVVGRGRNEVTTSNDPTAHAEIQAI 59

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
           R  CR L    L + DLY + EPC MC  AI  AR R +YY  +      +    QF   
Sbjct: 60  REACRHLETFQLNDCDLYTSCEPCPMCLGAIYWARPRNVYYACTKEDAAHVGFDDQFIYE 119

Query: 120 ATCHHSPE 127
                  E
Sbjct: 120 QIVLPHEE 127


>gi|260549627|ref|ZP_05823845.1| guanine deaminase [Acinetobacter sp. RUH2624]
 gi|260407420|gb|EEX00895.1| guanine deaminase [Acinetobacter sp. RUH2624]
          Length = 160

 Score =  150 bits (381), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 42/120 (35%), Positives = 63/120 (52%), Gaps = 1/120 (0%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           MK+  +F+  ALE A +   +   P GAV V + K+I+   N+     D TAHAE+LAIR
Sbjct: 1   MKENQMFLRQALELAYHNVEKGGRPFGAVIVKDGKVIASGVNQILTTNDPTAHAELLAIR 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIE-NGTQFYTL 119
              ++L    L    ++ +  PC MC AA+ LA I+ ++Y  SN  G     + T+ Y  
Sbjct: 61  AASQVLGTANLEGCSVFASGHPCPMCMAAMRLAGIKTVHYAYSNEDGKPFGLSTTEIYAD 120


>gi|237708779|ref|ZP_04539260.1| cytidine/deoxycytidylate deaminase [Bacteroides sp. 9_1_42FAA]
 gi|265755955|ref|ZP_06090422.1| cytidine/deoxycytidylate deaminase [Bacteroides sp. 3_1_33FAA]
 gi|229457205|gb|EEO62926.1| cytidine/deoxycytidylate deaminase [Bacteroides sp. 9_1_42FAA]
 gi|263234033|gb|EEZ19634.1| cytidine/deoxycytidylate deaminase [Bacteroides sp. 3_1_33FAA]
          Length = 155

 Score =  150 bits (381), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 44/150 (29%), Positives = 64/150 (42%), Gaps = 10/150 (6%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           MKK  + M  A+E +         P GAV   + +II+   NR     D TAHAE+ AIR
Sbjct: 1   MKKEEL-MRKAIELSIENVANGGGPFGAVIAKDGEIIATGVNRVTSQCDPTAHAEVSAIR 59

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF-YTL 119
                L    L   ++Y + EPC MC  AI  AR+ ++YY  +      I     F Y  
Sbjct: 60  AAATKLGTFNLSGCEIYTSCEPCPMCLGAIYWARLDKMYYANNKTDAKNIGFDDSFIYDE 119

Query: 120 ATCHHSP-----EIYPGISEQRSRQIIQDF 144
            +   S      EI   +  + + +  Q +
Sbjct: 120 LSLKPSARKLPSEI---LLAEEAIKAFQQW 146


>gi|73670513|ref|YP_306528.1| dCMP deaminase [Methanosarcina barkeri str. Fusaro]
 gi|72397675|gb|AAZ71948.1| dCMP deaminase [Methanosarcina barkeri str. Fusaro]
          Length = 157

 Score =  150 bits (381), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 41/118 (34%), Positives = 57/118 (48%), Gaps = 4/118 (3%)

Query: 1   MKKGNV-FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
           M   +  FM  A+E +     +   P GAV V N +I++ + N    L D TAHAEI  I
Sbjct: 1   MSDNDFLFMKRAIELSLENVKKGGGPFGAVIVRNGEILAESCNMVTALNDPTAHAEINVI 60

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG--ASNP-KGGGIENGT 114
           R   R L    L    +Y + EPC MC  AI  ARI ++ +   AS+  K G  ++  
Sbjct: 61  REAARKLETFDLSGCTIYASCEPCPMCLGAIYWARIGKVVFANTASDAQKIGFADSLI 118


>gi|94676768|ref|YP_588482.1| cytidine/deoxycytidylate deaminase family protein [Baumannia
           cicadellinicola str. Hc (Homalodisca coagulata)]
 gi|94219918|gb|ABF14077.1| cytidine/deoxycytidylate deaminase family protein [Baumannia
           cicadellinicola str. Hc (Homalodisca coagulata)]
          Length = 158

 Score =  150 bits (381), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 45/129 (34%), Positives = 65/129 (50%)

Query: 21  RNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80
           + E+PVGA+ VL  K I    N +    D TAHAEILA+R G + +    +    +YVTL
Sbjct: 14  KGEVPVGAILVLEGKKIGEGLNSSIHYHDPTAHAEILALRQGGKTIGNYRITGAVMYVTL 73

Query: 81  EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140
           EPC MC  A+  ARI R+ +GA   K   +       +    +H+  + P I  +     
Sbjct: 74  EPCLMCIGAMIHARISRIAFGAKAVKNNEMSLCLSVLSSTQINHNITLCPNILAEACSLQ 133

Query: 141 IQDFFKERR 149
           +  FFK +R
Sbjct: 134 LSTFFKRKR 142


>gi|163787392|ref|ZP_02181839.1| cytidine/deoxycytidylate deaminase family protein [Flavobacteriales
           bacterium ALC-1]
 gi|159877280|gb|EDP71337.1| cytidine/deoxycytidylate deaminase family protein [Flavobacteriales
           bacterium ALC-1]
          Length = 159

 Score =  150 bits (381), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 41/116 (35%), Positives = 56/116 (48%), Gaps = 1/116 (0%)

Query: 2   KKGNVFMSCALEEAQNAALRNEI-PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +K   FM  A+  A      NE  P G V V + +I+ R  N+     D TAHAE+ AIR
Sbjct: 4   EKKEKFMLEAVNAALKGMNNNEGGPFGCVVVKDGEIVGRGNNKVTSTNDPTAHAEVTAIR 63

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116
             C+ L    L    +Y + EPC MC  AI  AR  ++YYG++      I    +F
Sbjct: 64  DACKNLDSFQLEGCQIYTSCEPCPMCLGAIYWARPDKVYYGSNQVDAANIGFDDEF 119


>gi|328771384|gb|EGF81424.1| hypothetical protein BATDEDRAFT_87367 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 182

 Score =  150 bits (380), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 46/157 (29%), Positives = 74/157 (47%), Gaps = 15/157 (9%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNK-IISRAGNRNRELKDVTAHAEILAIR 60
           +    +M+ AL+ A +A    E+PVG V V  +K II +  NR  E  +   HAE  AI 
Sbjct: 7   QDDKKYMTMALQLASDAYDVGEVPVGCVFVHASKGIIGQGRNRTNESLNGVRHAEFEAID 66

Query: 61  MGCRILSQEI---------LPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIE 111
               +   E           P+ D+YVT+EPC MCA+A+   +IRR+ +G  N K GG  
Sbjct: 67  QIMSMRPLETDLDTYVKTTFPQTDVYVTVEPCIMCASALRHLQIRRVVFGCGNDKFGGCG 126

Query: 112 NGTQFYTL---ATCHHSPEIYPGISEQRSRQIIQDFF 145
           +    +     A  ++      G+ +  +   ++ F+
Sbjct: 127 SVFHIHDDGVGAGFNYPA--VGGLFKNEAIMALRRFY 161


>gi|254459431|ref|ZP_05072850.1| guanine deaminase [Campylobacterales bacterium GD 1]
 gi|207083841|gb|EDZ61134.1| guanine deaminase [Campylobacterales bacterium GD 1]
          Length = 152

 Score =  150 bits (380), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 41/104 (39%), Positives = 54/104 (51%), Gaps = 1/104 (0%)

Query: 5   NVFMSCALEEAQNA-ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
           N +M  A +EA       +  P GAV V ++KIIS+A N+  +  D TAHAE+ AIR   
Sbjct: 2   NKWMKIAYDEATEGMLANDGGPFGAVIVKDDKIISQAHNQVLKSNDPTAHAEVNAIRKAS 61

Query: 64  RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKG 107
            +L    L    LY +  PC MC  AI  ARI  +YY A+    
Sbjct: 62  EVLETFDLSGCVLYTSCMPCPMCLGAIFWARIETVYYSATEEDA 105


>gi|149248448|ref|XP_001528611.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
           YB-4239]
 gi|146448565|gb|EDK42953.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
           YB-4239]
          Length = 271

 Score =  150 bits (380), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 42/148 (28%), Positives = 67/148 (45%), Gaps = 4/148 (2%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           + +   FM+ AL     A L+NE PV  V     +IIS   N      + T HAE +A+ 
Sbjct: 5   LSQHFKFMAVALFVGYKALLKNETPVACVVTRGCQIISIGYNHTNITLNGTKHAEFIAL- 63

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              R+        + LYVT+EPC MCA+ +    ++ + YG  N + GG       +   
Sbjct: 64  --GRLKEPVDYKNLTLYVTVEPCIMCASYLRQLGLKNVIYGCGNDRFGGAGTILPLHNDP 121

Query: 121 TCHHSP-EIYPGISEQRSRQIIQDFFKE 147
              H P     GI    + Q++++F+ +
Sbjct: 122 KLPHKPLTCIDGICRTEAIQLLRNFYIQ 149


>gi|115378509|ref|ZP_01465666.1| tRNA-specific adenosine deaminase [Stigmatella aurantiaca DW4/3-1]
 gi|115364478|gb|EAU63556.1| tRNA-specific adenosine deaminase [Stigmatella aurantiaca DW4/3-1]
          Length = 148

 Score =  150 bits (380), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 49/128 (38%), Positives = 67/128 (52%)

Query: 22  NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81
            E+PVGAVAV   ++I    NR    +   AHAE+LA+    R L    L  V LYVTLE
Sbjct: 15  GEVPVGAVAVHQGQVIGTGFNRREIDRHPFAHAELLALDAAARSLGVWRLTGVTLYVTLE 74

Query: 82  PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141
           PC MCA A+   R+ RL +G  +PK G   +          +H  ++  GI    SRQ++
Sbjct: 75  PCAMCAGAMVQGRVTRLVFGTLDPKAGAAGSLYNLVEEPRHNHRLQVTSGILADESRQLL 134

Query: 142 QDFFKERR 149
           + FF+  R
Sbjct: 135 KGFFERLR 142


>gi|328857268|gb|EGG06385.1| hypothetical protein MELLADRAFT_86571 [Melampsora larici-populina
           98AG31]
          Length = 171

 Score =  150 bits (380), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 44/146 (30%), Positives = 73/146 (50%), Gaps = 8/146 (5%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           MS A++ A+ A   NEIPVG V +  L+ K+IS+  NR  E ++ + HAE  A+      
Sbjct: 1   MSEAIKMAEEAFSANEIPVGCVFINELDGKLISKGRNRTNETRNASLHAEFDALSSLLPN 60

Query: 66  LSQEILP----EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
                L      + LYVT+EPC MC++A+    I+++++G SN + GG       +    
Sbjct: 61  PKNPNLKTDFKNLTLYVTVEPCLMCSSALRQIGIKKVFFGCSNDRFGGCGGVISIHNDPR 120

Query: 122 CHHS--PEIYPGISEQRSRQIIQDFF 145
              S     Y G   + +  +++ F+
Sbjct: 121 LLFSEPFVAYGGYRREEAIILLRKFY 146


>gi|293608518|ref|ZP_06690821.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|292829091|gb|EFF87453.1| conserved hypothetical protein [Acinetobacter sp. SH024]
          Length = 161

 Score =  150 bits (380), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 42/107 (39%), Positives = 57/107 (53%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M+KG  F+  A+E A     +   P GAV V N +II+   N+     D TAHAE+LAIR
Sbjct: 2   MEKGEQFLRKAIELAYKNIEKGGRPFGAVVVKNGEIIASGVNQILVTNDPTAHAELLAIR 61

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKG 107
              ++L    L    +Y +  PC MC AA+ LA I+ + Y  SN  G
Sbjct: 62  AASQVLGSANLEGCSVYASGHPCPMCMAAMRLAGIKSVSYAYSNEDG 108


>gi|91772283|ref|YP_564975.1| CMP/dCMP deaminase, zinc-binding [Methanococcoides burtonii DSM
           6242]
 gi|91711298|gb|ABE51225.1| Guanine deaminase [Methanococcoides burtonii DSM 6242]
          Length = 159

 Score =  150 bits (380), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 45/115 (39%), Positives = 58/115 (50%), Gaps = 3/115 (2%)

Query: 1   MKKG--NVFMSCALEEAQNAALRNEI-PVGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57
           M +     FM  A++EAQ     NE  P GAV V ++ IIS+  N      D +AHAEI+
Sbjct: 1   MSEHLMEYFMDAAVKEAQKGMRNNEGGPFGAVIVKDDTIISKGHNEVLGTNDPSAHAEIV 60

Query: 58  AIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN 112
           AIR     L    L   +LY T  PC MC +AI  ARI ++YYG S      +  
Sbjct: 61  AIRKASAALEDFDLSGCELYATTMPCPMCLSAIMWARIGKIYYGTSTEDVASLGF 115


>gi|33861475|ref|NP_893036.1| putative cytidine/deoxycytidylate deaminase [Prochlorococcus
           marinus subsp. pastoris str. CCMP1986]
 gi|33634052|emb|CAE19377.1| putative cytidine/deoxycytidylate deaminase [Prochlorococcus
           marinus subsp. pastoris str. CCMP1986]
          Length = 165

 Score =  150 bits (380), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 44/145 (30%), Positives = 70/145 (48%), Gaps = 2/145 (1%)

Query: 6   VFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
            +M   L  ++      E+P+ AV +  N + I R  N+     D   HAE++A+R    
Sbjct: 19  KWMKFILRRSEEVGKV-ELPITAVIIDENGRCIGRGSNKREINNDPLGHAELIALRQASW 77

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
           I +     E  + V LEPCTMCAAA+  AR+ ++ YG  + K GG           + HH
Sbjct: 78  IKNDWRFNECSIIVNLEPCTMCAAALVQARMGQVIYGTKDDKRGGFGGTIDLSKHESAHH 137

Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149
             ++  G+  Q  +  I+ +FK+ R
Sbjct: 138 KMKVVGGVLNQDCKNNIKLWFKKMR 162


>gi|307170830|gb|EFN62941.1| tRNA-specific adenosine deaminase 2 [Camponotus floridanus]
          Length = 171

 Score =  150 bits (380), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 38/148 (25%), Positives = 75/148 (50%), Gaps = 8/148 (5%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           + +M  AL++A+ +    E+PVG + + NN+II+   N   E  + T HAEI  I    +
Sbjct: 4   SAWMDVALQKAEESLRAGEVPVGCLFIYNNEIIATGNNTVNETCNATRHAEINCIDQVLK 63

Query: 65  ILSQEILPEVDLY------VTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
              ++ L    ++      VT+EPC MC +A+   ++  + YG +N + GG  +  +   
Sbjct: 64  FCKEKCLQYETVFRNLDVVVTVEPCIMCISALLQLQVHSIIYGCANDRFGGCVSVLEV-- 121

Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFK 146
                    I   + ++++ ++++DF+K
Sbjct: 122 PKFYDPKVLIQGNVKKEQAMKLLKDFYK 149


>gi|296118010|ref|ZP_06836592.1| tRNA-specific adenosine deaminase [Corynebacterium ammoniagenes DSM
           20306]
 gi|295968896|gb|EFG82139.1| tRNA-specific adenosine deaminase [Corynebacterium ammoniagenes DSM
           20306]
          Length = 151

 Score =  150 bits (379), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 48/144 (33%), Positives = 68/144 (47%), Gaps = 3/144 (2%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  AL+ A       ++PVGAV    +   ++   NR   L D TAHAE+ AIR   R  
Sbjct: 4   MQRALDVAATTPA-GDVPVGAVIYGPDGAELATGVNRREALADPTAHAEVEAIRAAVREY 62

Query: 67  SQ-EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
                L   +L VTLEPC MCA A   AR+  + +GA  PK G   +             
Sbjct: 63  GDSWRLEGCELVVTLEPCAMCAGAAQAARVSSVVFGAWEPKTGACGSLVDVLRAPGALFV 122

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
           PE+  G+ E   +++++ FF+  R
Sbjct: 123 PEVRAGVLEAECQEVLRKFFENLR 146


>gi|194743340|ref|XP_001954158.1| GF18139 [Drosophila ananassae]
 gi|190627195|gb|EDV42719.1| GF18139 [Drosophila ananassae]
          Length = 160

 Score =  150 bits (379), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 46/147 (31%), Positives = 73/147 (49%), Gaps = 9/147 (6%)

Query: 6   VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
            FM  A  EA+ A    E+PVG V VL +K+I+R GN     ++ T HAE + I      
Sbjct: 3   AFMEEAFIEARRARDAGEVPVGCVFVLGDKVIARGGNEVNVHRNATRHAEFICIDATLAY 62

Query: 66  LSQEILP------EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
             ++ LP      E+ + VT+EPC MC+AA+    ++ + YG  N + GG    T     
Sbjct: 63  CREKRLPARQMFSEITVVVTVEPCIMCSAALHTLGVKEIIYGCENDRFGG---KTVVDVA 119

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFK 146
           A      +I  G+    +  ++++F+K
Sbjct: 120 AVVGQRIDITGGVRADEAMALLKEFYK 146


>gi|159471219|ref|XP_001693754.1| predicted protein [Chlamydomonas reinhardtii]
 gi|158283257|gb|EDP09008.1| predicted protein [Chlamydomonas reinhardtii]
          Length = 143

 Score =  150 bits (379), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 43/129 (33%), Positives = 63/129 (48%), Gaps = 2/129 (1%)

Query: 22  NEIPVGAVAVLNNK--IISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVT 79
           +E+PVGAV V  +   +++   NR   L+   AHAE+L +  G        L    LYVT
Sbjct: 15  DEVPVGAVLVAADGATVLAAGHNRVHRLRSPLAHAEMLCLAAGAARSRAWRLLGTTLYVT 74

Query: 80  LEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139
           LEPC MCA A+  AR+ R+ YGA  P+ G   +          H S  +  G   +    
Sbjct: 75  LEPCPMCAGALMQARVGRVVYGARQPRLGADGSWAPPPPPHPFHDSIVVEGGCLAEECAD 134

Query: 140 IIQDFFKER 148
           +++ FF+ R
Sbjct: 135 VMRAFFRRR 143


>gi|209879105|ref|XP_002140993.1| cytidine/deoxycytidylate deaminase family protein [Cryptosporidium
           muris RN66]
 gi|209556599|gb|EEA06644.1| cytidine/deoxycytidylate deaminase family protein [Cryptosporidium
           muris RN66]
          Length = 189

 Score =  150 bits (379), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 47/163 (28%), Positives = 73/163 (44%), Gaps = 22/163 (13%)

Query: 6   VFMSCALEEAQNAALRNEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
            FM  AL+ A  A   +EIPVG + V     +I S A N      + T H E++A+    
Sbjct: 10  FFMKEALKWATKAFDTDEIPVGCILVNRETKEIESAAHNETNISCNATRHCEVVALERLA 69

Query: 64  RILSQEILPE-------------------VDLYVTLEPCTMCAAAISLARIRRLYYGASN 104
             L QE L                      DL+VT+EPC MC   ++ A I+ +YYG  N
Sbjct: 70  DKLIQE-LDGINCKDINTKFPLKPEFGQYYDLFVTVEPCIMCIGILNQAGIKGIYYGCKN 128

Query: 105 PKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
            + GG  +   F+ +   +   +I   I    + +++QDF++ 
Sbjct: 129 DRFGGCGSVIDFHDVIDINSEIQIKSNILADEAIKLLQDFYER 171


>gi|219113417|ref|XP_002186292.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|209583142|gb|ACI65762.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 180

 Score =  150 bits (379), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 46/155 (29%), Positives = 71/155 (45%), Gaps = 17/155 (10%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNK----IISRAGNRNRELKDVTAHAEILAIRMG- 62
           M  AL  A+ A    E+PVG V V+  +    ++S   N+    +D T   E   IR G 
Sbjct: 1   MRQALRVAKAALDIGEVPVGCVIVMPTETGPVVVSHGANQVNATRDGTWKHEKQNIREGT 60

Query: 63  -----------CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIE 111
                       R    E L +  LYVT EPC MCAAA++  +I ++Y+G  N K GG  
Sbjct: 61  GEWRNAYGWGSGRRFKPEELKKCRLYVTCEPCIMCAAALAQVQISKVYFGCRNDKFGGCG 120

Query: 112 NGTQFYTLATCHHS-PEIYPGISEQRSRQIIQDFF 145
           +    +     HH+   +  G+ E  +  +++ F+
Sbjct: 121 SILHLHKDHPPHHAGYPVSGGMLEDDAVGLLRSFY 155


>gi|189466441|ref|ZP_03015226.1| hypothetical protein BACINT_02816 [Bacteroides intestinalis DSM
           17393]
 gi|189434705|gb|EDV03690.1| hypothetical protein BACINT_02816 [Bacteroides intestinalis DSM
           17393]
          Length = 175

 Score =  150 bits (379), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 40/120 (33%), Positives = 53/120 (44%), Gaps = 1/120 (0%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M K  + M  A+E +         P GAV   + +II+   NR     D TAHAE+ AIR
Sbjct: 21  MTKEEL-MRKAIELSTENVANGGGPFGAVIAKDGEIIATGTNRVTASCDPTAHAEVSAIR 79

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
                L    L   ++Y + EPC MC  AI  AR+ R+YYG +      I     F    
Sbjct: 80  AAATKLGTFNLSGCEIYTSCEPCPMCLGAIYWARLERMYYGNNKTDAKNIGFDDSFIYDE 139


>gi|209548305|ref|YP_002280222.1| CMP/dCMP deaminase zinc-binding [Rhizobium leguminosarum bv.
           trifolii WSM2304]
 gi|209534061|gb|ACI53996.1| CMP/dCMP deaminase zinc-binding [Rhizobium leguminosarum bv.
           trifolii WSM2304]
          Length = 157

 Score =  150 bits (379), Expect = 9e-35,   Method: Composition-based stats.
 Identities = 38/150 (25%), Positives = 68/150 (45%), Gaps = 5/150 (3%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M+    F+  A+  +++A  + + P G+V V + ++I RA N      D+T HAE+  I+
Sbjct: 1   MENHEPFLREAIALSKSAMDQGDEPFGSVLVKDGEVILRAENSVFTGHDMTNHAEMNLIK 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI-ENGTQFYTL 119
              +      L +  LY + EPC MC+ AI  + I R+ +  S  + G I   G    + 
Sbjct: 61  SAAKHYDTGFLADCTLYTSTEPCAMCSGAIYWSGIGRMVFACSEARLGEIAGIGLNVPSR 120

Query: 120 ATCH---HSPEIYPGI-SEQRSRQIIQDFF 145
           A       +  +      E  + ++ Q F+
Sbjct: 121 AVLQTGARTVTVVGPTNLEDEAAEVHQAFW 150


>gi|195110631|ref|XP_001999883.1| GI24773 [Drosophila mojavensis]
 gi|193916477|gb|EDW15344.1| GI24773 [Drosophila mojavensis]
          Length = 160

 Score =  150 bits (379), Expect = 9e-35,   Method: Composition-based stats.
 Identities = 48/147 (32%), Positives = 73/147 (49%), Gaps = 9/147 (6%)

Query: 6   VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
            FM  AL EA+ A    E+PVG V V N+K+I+R GN     ++ T HAE + I      
Sbjct: 3   AFMEEALVEARRARDAGEVPVGCVFVHNDKVIARGGNEVNVHRNATRHAEFICIDATLAY 62

Query: 66  LSQEILP------EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
             ++ LP      E+ + VT+EPC MC+AA+    ++ + YG  N + GG    T     
Sbjct: 63  CREKRLPARQVFSEISVVVTVEPCIMCSAALHTLAVKEIIYGCENDRFGG---KTVIDVA 119

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFK 146
           A       I  G+    +  +++DF+K
Sbjct: 120 AVVGQQINITGGVRADEAMALLKDFYK 146


>gi|193212272|ref|YP_001998225.1| CMP/dCMP deaminase zinc-binding [Chlorobaculum parvum NCIB 8327]
 gi|193085749|gb|ACF11025.1| CMP/dCMP deaminase zinc-binding [Chlorobaculum parvum NCIB 8327]
          Length = 148

 Score =  149 bits (378), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 47/149 (31%), Positives = 65/149 (43%), Gaps = 14/149 (9%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M +   FM+ ALE+A+ +     +PVGAV V N K+I+   N+  +  D  AH E+  IR
Sbjct: 1   MDRDREFMALALEQARKSYEEGGVPVGAVMVENGKLIAAGHNQRVQNADPIAHGEMDCIR 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              R         V LY TL PC MCA AI    I R+  G      G  E   +     
Sbjct: 61  KAGRRA---RYDTVTLYTTLSPCMMCAGAIVQFGIGRVVVGEDRNFKGNAEFLRE----- 112

Query: 121 TCHHSPEIYPGISEQR-SRQIIQDFFKER 148
              H  E+   + +    R ++  F  ER
Sbjct: 113 ---HGVEVT--LLDDEGCRALMDTFIAER 136


>gi|241203539|ref|YP_002974635.1| CMP/dCMP deaminase zinc-binding [Rhizobium leguminosarum bv.
           trifolii WSM1325]
 gi|240857429|gb|ACS55096.1| CMP/dCMP deaminase zinc-binding [Rhizobium leguminosarum bv.
           trifolii WSM1325]
          Length = 158

 Score =  149 bits (378), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 39/151 (25%), Positives = 68/151 (45%), Gaps = 6/151 (3%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M+    F+  A+  +++A    + P G+V V + ++I RA N      D+T HAE+  ++
Sbjct: 1   MENHEPFLREAIALSKSAMANGDEPFGSVLVKDGEVILRAENSVFTGHDMTNHAEMNLVK 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI-ENGTQFYTL 119
           +  +      L    LY + EPC MC+ AI  + I R+ +  S  + G I   G    + 
Sbjct: 61  LAAQHYDTAFLAGCTLYTSTEPCAMCSGAIYWSGIGRMVFACSETRLGEIAGIGLNVPSR 120

Query: 120 ATCHHSPEIYPGI-----SEQRSRQIIQDFF 145
           A       I   +      E  + ++ QDF+
Sbjct: 121 AVLQTGARIVTVVGPDPKLEDEAAEVHQDFW 151


>gi|316971587|gb|EFV55344.1| tRNA-specific adenosine deaminase 2 [Trichinella spiralis]
          Length = 311

 Score =  149 bits (378), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 44/154 (28%), Positives = 66/154 (42%), Gaps = 10/154 (6%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M         A   A+ A    E+PVG V +  N II R  NR    K+   HAE+ A  
Sbjct: 1   MLSEEKCFEEAFTLARKALSIGEVPVGCVLLYENVIIGRGHNRVNFYKNACRHAEMEAFD 60

Query: 61  MGCRILS------QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGT 114
                         ++  +  L+VT EPC MCAA I   +++R+ YG  N + GG  +  
Sbjct: 61  EAFLWCKANCFSFNDVFLKTTLFVTCEPCMMCAALICKMQLKRVVYGCPNDRFGGFGSVL 120

Query: 115 QFYTLATCHHSP--EIYPGISEQRSRQIIQDFFK 146
                 T  H+   EI     +  S +++Q F++
Sbjct: 121 DVKE--TFGHTFPSEIVANYRKDESVKLLQIFYE 152


>gi|255076837|ref|XP_002502085.1| predicted protein [Micromonas sp. RCC299]
 gi|226517350|gb|ACO63343.1| predicted protein [Micromonas sp. RCC299]
          Length = 193

 Score =  149 bits (378), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 47/170 (27%), Positives = 71/170 (41%), Gaps = 33/170 (19%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  ALEEA+ A  R E+PVG V V + ++++   NR  E ++ T HAE  A+        
Sbjct: 1   MRVALEEAEGALARWEVPVGCVVVRDGEVVASGSNRTNEKRNGTRHAEFEAVDELLARHG 60

Query: 68  QEI----LPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL---- 119
            +          LYVT+EPC MCA A+SL    R+ YG  N K GG  +    +      
Sbjct: 61  GDAVAAGFDRCSLYVTVEPCIMCAGALSLLGFERVTYGCGNDKFGGNGSILSIHDDGCAP 120

Query: 120 ------------------------ATCHHSPEIYPGISEQRSRQIIQDFF 145
                                      +  P +  G+  + +  ++QDF+
Sbjct: 121 CVEEPASSSKSHAGSDGKVSNDDARAANTYPSV-GGLFAEEAIALLQDFY 169


>gi|302346851|ref|YP_003815149.1| guanine deaminase [Prevotella melaninogenica ATCC 25845]
 gi|302150909|gb|ADK97170.1| guanine deaminase [Prevotella melaninogenica ATCC 25845]
          Length = 155

 Score =  149 bits (378), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 40/150 (26%), Positives = 62/150 (41%), Gaps = 10/150 (6%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M K  + M  A+E + ++      P GAV   N +II+   N      D TAHAE+  IR
Sbjct: 1   MTKEEL-MRRAIELSADSVRNGGGPFGAVIARNGEIIAEGSNGVTIYNDPTAHAEVSTIR 59

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFY--- 117
             C+ L+   L   ++Y + EPC MC  AI  A + ++YY         I     F    
Sbjct: 60  KACQKLNTFDLSGCEIYTSCEPCPMCFGAIYWAHLDKIYYANDRKDAADIGFDDDFIYQE 119

Query: 118 --TLATCHHSP-EIYPGISEQRSRQIIQDF 144
                     P EI   +    + ++ + +
Sbjct: 120 IAVQPQYRKKPSEI---LLRNEALEVFKQW 146


>gi|291326525|ref|ZP_06124898.2| tRNA-specific adenosine deaminase [Providencia rettgeri DSM 1131]
 gi|291314071|gb|EFE54524.1| tRNA-specific adenosine deaminase [Providencia rettgeri DSM 1131]
          Length = 169

 Score =  149 bits (377), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 41/147 (27%), Positives = 64/147 (43%), Gaps = 4/147 (2%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
              FM+ AL  A +AA     P GAV V NN+++    N      D T HAE+  IR  C
Sbjct: 20  DIQFMTQALALATDAAKNGNEPFGAVLVKNNQVVMTGENHIHTESDPTYHAELGLIRQYC 79

Query: 64  RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS-NPKGGGIENGTQFYTLATC 122
                  L +  LY + EPC MC+ A+  +++ R+ Y  S +             +    
Sbjct: 80  SEHKVMDLSDYTLYTSCEPCCMCSGAMVWSQLGRMVYSLSHDELAEIAGFNIMLGSDEIF 139

Query: 123 ---HHSPEIYPGISEQRSRQIIQDFFK 146
                 PE+  G+ ++++  I   +FK
Sbjct: 140 AKSPFKPEVVKGVLKEQAISIYTQYFK 166


>gi|288905614|ref|YP_003430836.1| guanine deaminase [Streptococcus gallolyticus UCN34]
 gi|288732340|emb|CBI13910.1| putative guanine deaminase [Streptococcus gallolyticus UCN34]
          Length = 154

 Score =  149 bits (377), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 42/155 (27%), Positives = 65/155 (41%), Gaps = 26/155 (16%)

Query: 5   NVFMSCALEEAQNAALRNEI-PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
             +M  A++EA +   + +  P G+V V N +I++   N      D TAH E+ AIR   
Sbjct: 3   EDYMQKAIQEAYDGIKKGDGGPFGSVIVKNGEIVASGHNMVLAHHDPTAHGEVTAIRKAG 62

Query: 64  RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS--------------NPKGGG 109
             L    L    L+ T EPC MC AA   A I ++YYG +              +   GG
Sbjct: 63  EKLGTHDLSGTTLFTTGEPCPMCLAACLWANIDKVYYGCTIADNAMIGFRDQRFDELMGG 122

Query: 110 IENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
            +N  + Y L   +H              ++ +D+
Sbjct: 123 RKNLPKDY-LVQLNH----------DECLKLFKDY 146


>gi|323343460|ref|ZP_08083687.1| guanine deaminase [Prevotella oralis ATCC 33269]
 gi|323095279|gb|EFZ37853.1| guanine deaminase [Prevotella oralis ATCC 33269]
          Length = 156

 Score =  149 bits (377), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 41/116 (35%), Positives = 52/116 (44%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M K    M  A+  ++ +      P GAV   N +II+ A NR     D TAHAE+ AIR
Sbjct: 1   MMKQTDLMRRAIALSEQSVRNGGGPFGAVVARNGEIIAEASNRVTIDHDPTAHAEVNAIR 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116
              R L    L   D+Y + EPC MC  AI  A + R+YY         I     F
Sbjct: 61  KAARELDTFDLSGCDIYTSCEPCPMCLGAIYWAHLNRIYYANDRKDAARIGFDDDF 116


>gi|322436459|ref|YP_004218671.1| CMP/dCMP deaminase zinc-binding protein [Acidobacterium sp.
           MP5ACTX9]
 gi|321164186|gb|ADW69891.1| CMP/dCMP deaminase zinc-binding protein [Acidobacterium sp.
           MP5ACTX9]
          Length = 160

 Score =  149 bits (377), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 40/116 (34%), Positives = 53/116 (45%), Gaps = 1/116 (0%)

Query: 3   KGNVFMSCALEEAQNAALRN-EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
             + FM  A++ A    L     P GAV V   ++I+   N      D TAHAE+ AIR 
Sbjct: 6   DHDKFMQQAIDLATQNVLSGRGGPFGAVIVRAGEVIATGINLVTATNDPTAHAEVTAIRN 65

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFY 117
            C  LS   L    LY + EPC MC  AI  +RI  LY+G++            F+
Sbjct: 66  ACAHLSTFELRGATLYSSCEPCPMCLTAILWSRIDTLYFGSTATDAAEAGFDDSFF 121


>gi|261407450|ref|YP_003243691.1| CMP/dCMP deaminase zinc-binding protein [Paenibacillus sp.
           Y412MC10]
 gi|261283913|gb|ACX65884.1| CMP/dCMP deaminase zinc-binding protein [Paenibacillus sp.
           Y412MC10]
          Length = 159

 Score =  148 bits (376), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 37/119 (31%), Positives = 50/119 (42%), Gaps = 1/119 (0%)

Query: 3   KGNVFMSCALEEAQNAALR-NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
               +M  A+ EA          P GA+ V + ++I R  N    L D TAHAE+ AIR 
Sbjct: 5   NHEYWMHQAIAEAHRNVQHVEGGPFGAIVVKDGQVIGRGRNLVTALNDPTAHAEVQAIRE 64

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
            C  L    L    +Y + EPC MC  AI  +R   +YY ++      I     F    
Sbjct: 65  ACLHLEDFQLKGCTIYTSCEPCPMCLGAIYWSRPDAVYYASTKQDAAEIGFDDHFIYDE 123


>gi|325283258|ref|YP_004255799.1| tRNA(Ile)-lysidine synthase [Deinococcus proteolyticus MRP]
 gi|324315067|gb|ADY26182.1| tRNA(Ile)-lysidine synthase [Deinococcus proteolyticus MRP]
          Length = 529

 Score =  148 bits (376), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 43/128 (33%), Positives = 60/128 (46%), Gaps = 2/128 (1%)

Query: 23  EIPVGA-VAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81
           E+PVGA V      ++    NR+RE  D+T HAE+ A+R     L    L    L VTLE
Sbjct: 400 EVPVGAAVLDPAGAVVGLGRNRSRERGDMTRHAELEALRQAASALGTPYLSGCTLAVTLE 459

Query: 82  PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141
           PC MC  A   AR+ R+ YGA+NP+ G +               P++  G        ++
Sbjct: 460 PCPMCLGAALEARVGRIVYGAANPRAGALGGVHDLLGH-RWGVRPQVQGGYRAGECAGLL 518

Query: 142 QDFFKERR 149
           +  F E R
Sbjct: 519 KKAFAEFR 526


>gi|255530772|ref|YP_003091144.1| zinc-binding CMP/dCMP deaminase [Pedobacter heparinus DSM 2366]
 gi|255343756|gb|ACU03082.1| CMP/dCMP deaminase zinc-binding [Pedobacter heparinus DSM 2366]
          Length = 160

 Score =  148 bits (376), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 39/140 (27%), Positives = 62/140 (44%), Gaps = 4/140 (2%)

Query: 2   KKGNVFMSCALEEAQN-AALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
            +   FM  A++ ++         P GAV V N K+I+++ N+     D TAHAE+ AIR
Sbjct: 5   DQHEKFMKMAIQLSEENVLDTVGGPFGAVIVKNGKVIAKSANKVTSTNDPTAHAEVSAIR 64

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT-- 118
           M C+ L    L    +Y + EPC MC +AI  A+I  +Y+  +      I    +F    
Sbjct: 65  MACKKLKTFDLSGCTVYTSCEPCPMCLSAIYWAKIDAIYFANTKDDAANIGFSDKFIYDE 124

Query: 119 -LATCHHSPEIYPGISEQRS 137
              + H        +    +
Sbjct: 125 LDKSMHKRKLPIKQMMRDEA 144


>gi|307151761|ref|YP_003887145.1| Guanine deaminase [Cyanothece sp. PCC 7822]
 gi|306981989|gb|ADN13870.1| Guanine deaminase [Cyanothece sp. PCC 7822]
          Length = 158

 Score =  148 bits (376), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 41/149 (27%), Positives = 65/149 (43%), Gaps = 8/149 (5%)

Query: 1   MKK-GNVFMSCALEEAQNAALRN-EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           M    + FM+ A+  +          P GAV V  +KII++  N+     D TAHAE++A
Sbjct: 1   MSDIHHQFMAEAIALSFEGMRLGKGGPFGAVIVKEHKIIAKGYNQVTSTNDPTAHAEVVA 60

Query: 59  IRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
           IR  C++L    L   +LY + EPC MC AAI  A + ++YY  +      I     F  
Sbjct: 61  IRQACQLLQTFELKGCELYTSCEPCPMCLAAIYWASVDKVYYANTKVDAAQIGFDDNFID 120

Query: 119 LA---TCHHSPEIYPGISEQRSRQIIQDF 144
                  +        + +  +   ++ F
Sbjct: 121 QEIKLPINKRKMPMIQLRQDEA---LKAF 146


>gi|288803845|ref|ZP_06409271.1| guanine deaminase [Prevotella melaninogenica D18]
 gi|288333679|gb|EFC72128.1| guanine deaminase [Prevotella melaninogenica D18]
          Length = 155

 Score =  148 bits (376), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 40/150 (26%), Positives = 62/150 (41%), Gaps = 10/150 (6%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M K  + M  A+E + ++      P GAV   N +II+   N      D TAHAE+  IR
Sbjct: 1   MTKEEL-MRRAIELSADSVRNGGGPFGAVIARNGEIIAEGSNGVTIYNDPTAHAEVSTIR 59

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFY--- 117
             C+ L+   L   ++Y + EPC MC  AI  A + ++YY         I     F    
Sbjct: 60  KACQKLNTFDLSGCEIYTSCEPCPMCFGAIYWAHLDKIYYANDRKDAADIGFDDDFIYQE 119

Query: 118 --TLATCHHSP-EIYPGISEQRSRQIIQDF 144
                     P EI   +    + ++ + +
Sbjct: 120 IAVQPQYRKKPSEI---LLRNEALEVFKQW 146


>gi|329928171|ref|ZP_08282117.1| guanine deaminase [Paenibacillus sp. HGF5]
 gi|328938048|gb|EGG34447.1| guanine deaminase [Paenibacillus sp. HGF5]
          Length = 188

 Score =  148 bits (376), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 37/119 (31%), Positives = 50/119 (42%), Gaps = 1/119 (0%)

Query: 3   KGNVFMSCALEEAQNAALR-NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
               +M  A+ EA          P GA+ V + ++I R  N    L D TAHAE+ AIR 
Sbjct: 34  NHEYWMHQAIAEAHRNVQHVEGGPFGAIVVKDGQVIGRGRNLVTALNDPTAHAEVQAIRE 93

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
            C  L    L    +Y + EPC MC  AI  +R   +YY ++      I     F    
Sbjct: 94  ACLHLEDFQLKGCTIYTSCEPCPMCLGAIYWSRPDAVYYASTKQDAAEIGFDDHFIYDE 152


>gi|159906167|ref|YP_001549829.1| CMP/dCMP deaminase zinc-binding [Methanococcus maripaludis C6]
 gi|159887660|gb|ABX02597.1| CMP/dCMP deaminase zinc-binding [Methanococcus maripaludis C6]
          Length = 145

 Score =  148 bits (376), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 44/141 (31%), Positives = 70/141 (49%), Gaps = 10/141 (7%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  A++EA+       IP+GAV V  NKII R  NR  +      HAE+ A+    R L
Sbjct: 4   FMEEAIKEAKLGLEEGGIPIGAVLVYKNKIIGRGHNRRVQTNSAILHAEMDALENAGR-L 62

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
           + +I    +LY TL PC MC+ A+ L +I+++  G +    G                S 
Sbjct: 63  TSDIYKNCELYTTLSPCIMCSGAVLLYKIKKVVIGENKTFLGA----EDLLIKNGV--SV 116

Query: 127 EIYPGISEQRSRQIIQDFFKE 147
           E+   ++++R  ++++DF K 
Sbjct: 117 EV---LNDERCVKMMEDFIKN 134


>gi|198276275|ref|ZP_03208806.1| hypothetical protein BACPLE_02467 [Bacteroides plebeius DSM 17135]
 gi|198270717|gb|EDY94987.1| hypothetical protein BACPLE_02467 [Bacteroides plebeius DSM 17135]
          Length = 155

 Score =  148 bits (376), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 38/116 (32%), Positives = 53/116 (45%), Gaps = 1/116 (0%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M K  + M  A+E +         P GAV   + +I++   NR     D TAHAE+ AIR
Sbjct: 1   MTKEEL-MRKAIELSVKNVAEGGGPFGAVIAKDGEIVATGVNRVTPDCDPTAHAEVSAIR 59

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116
              + L    L   ++Y + EPC MC  AI  A + R+YYG +      I     F
Sbjct: 60  AAAKKLGTFDLSGCEIYTSCEPCPMCLGAIYWAHLDRMYYGNNKHDAAAIGFDDAF 115


>gi|299770668|ref|YP_003732694.1| guanine deaminase (Guanase) (guanine aminase) (guanine
           aminohydrolase) (GAH) (GDEase) [Acinetobacter sp. DR1]
 gi|298700756|gb|ADI91321.1| guanine deaminase (Guanase) (guanine aminase) (guanine
           aminohydrolase) (GAH) (GDEase) [Acinetobacter sp. DR1]
          Length = 160

 Score =  148 bits (375), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 43/107 (40%), Positives = 58/107 (54%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M+KG  F+  A+E A N   +   P GAV V N ++I+   N+     D TAHAE+LAIR
Sbjct: 1   MEKGEQFLRNAIELAYNNIEKGGRPFGAVVVKNGEVIASGVNQILTTNDPTAHAELLAIR 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKG 107
              +IL    L    +Y +  PC MC AA+ LA I+ + Y  SN  G
Sbjct: 61  AASQILGSANLEGCSVYASGHPCPMCMAAMRLAGIKSVSYAYSNEDG 107


>gi|256080810|ref|XP_002576669.1| cytidine/deoxycytidylate deaminase-related [Schistosoma mansoni]
 gi|238661948|emb|CAZ32906.1| cytidine/deoxycytidylate deaminase-related [Schistosoma mansoni]
          Length = 165

 Score =  148 bits (375), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 49/149 (32%), Positives = 75/149 (50%), Gaps = 9/149 (6%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR---MGCR 64
           M  A E A  A   NE+PVG   V N ++I+   N     +D T HAE++ IR     CR
Sbjct: 1   MDIAFELACEALRCNEVPVGCAFVYNGEVIASGRNEVNATRDATQHAEMVTIRRLEQWCR 60

Query: 65  ILSQE---ILPEVDLYVTLEPCTMCAAAISL---ARIRRLYYGASNPKGGGIENGTQFYT 118
              +E   IL E DL+VT+EPC MCAAAI     A ++ + YGA N + GG  +    + 
Sbjct: 61  NNQKELDKILVECDLFVTVEPCIMCAAAIRFCLPAHLKSITYGARNERFGGCGSVLSVHN 120

Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKE 147
             +         G+  + + ++++ F+ +
Sbjct: 121 SPSAVAPLNCISGVEAEAAVELLKKFYAQ 149


>gi|325121723|gb|ADY81246.1| guanine deaminase (Guanase) [Acinetobacter calcoaceticus PHEA-2]
          Length = 145

 Score =  148 bits (375), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 43/107 (40%), Positives = 58/107 (54%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M+KG  F+  A+E A N   +   P GAV V N +II+   N+     D TAHAE+LAIR
Sbjct: 1   MEKGEQFLRKAIELAYNNIEKGGRPFGAVVVKNGEIIASGVNQILVTNDPTAHAELLAIR 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKG 107
              ++L    L    +Y +  PC MC AA+ LA I+ + Y  SN  G
Sbjct: 61  AASQVLGSANLEGCSVYASGHPCPMCMAAMRLAGIKSVSYAYSNEDG 107


>gi|311085993|gb|ADP66075.1| hypothetical protein CWO_01335 [Buchnera aphidicola str. LL01
           (Acyrthosiphon pisum)]
          Length = 130

 Score =  148 bits (375), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 42/102 (41%), Positives = 59/102 (57%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           +K   +M  AL+ A  A  + EIP+GA+ V   +II    N +    D TAHAEI+A+R 
Sbjct: 4   EKDKNWMKIALKYAYYAKEKGEIPIGAILVFKERIIGIGWNSSISKNDPTAHAEIIALRG 63

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
             + +    L    LYVTL+PC MC  AI  +RI+RL +GA+
Sbjct: 64  AGKKIKNYRLLNTTLYVTLQPCIMCCGAIIQSRIKRLVFGAN 105


>gi|326800631|ref|YP_004318450.1| Guanine deaminase [Sphingobacterium sp. 21]
 gi|326551395|gb|ADZ79780.1| Guanine deaminase [Sphingobacterium sp. 21]
          Length = 160

 Score =  148 bits (375), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 39/103 (37%), Positives = 54/103 (52%), Gaps = 1/103 (0%)

Query: 2   KKGNVFMSCALEEAQNAALRN-EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           K   +F+  A++ A     +N   P G + V + KII +  N      D TAHAEI+AIR
Sbjct: 5   KDDIIFLKKAIDLAVTGVKQNKGGPFGCIIVKDGKIIGKGCNSVTSTIDPTAHAEIVAIR 64

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
             C+ L +  L +  LY + EPC MC  AI  AR  R+ Y A+
Sbjct: 65  DACKHLGEYQLDDCTLYASCEPCPMCLGAIYWARPSRVVYAAT 107


>gi|53712925|ref|YP_098917.1| cytidine/deoxycytidylate deaminase [Bacteroides fragilis YCH46]
 gi|60681139|ref|YP_211283.1| putative nucleotide deaminase [Bacteroides fragilis NCTC 9343]
 gi|253563096|ref|ZP_04840553.1| cytidine/deoxycytidylate deaminase [Bacteroides sp. 3_2_5]
 gi|265763023|ref|ZP_06091591.1| cytidine/deoxycytidylate deaminase [Bacteroides sp. 2_1_16]
 gi|52215790|dbj|BAD48383.1| cytidine/deoxycytidylate deaminase [Bacteroides fragilis YCH46]
 gi|60492573|emb|CAH07345.1| putative nucleotide deaminase [Bacteroides fragilis NCTC 9343]
 gi|251946872|gb|EES87154.1| cytidine/deoxycytidylate deaminase [Bacteroides sp. 3_2_5]
 gi|263255631|gb|EEZ26977.1| cytidine/deoxycytidylate deaminase [Bacteroides sp. 2_1_16]
 gi|301162628|emb|CBW22175.1| putative nucleotide deaminase [Bacteroides fragilis 638R]
          Length = 155

 Score =  148 bits (375), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 38/120 (31%), Positives = 54/120 (45%), Gaps = 1/120 (0%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M K  + M  A+E ++        P GAV   + +I++   NR     D TAHAE+ AIR
Sbjct: 1   MTKEEL-MRKAIELSRENVANGGGPFGAVIAKDGEIVATGVNRVTASCDPTAHAEVSAIR 59

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
                L    L   ++Y + EPC MC  AI  AR+ ++YYG +      I     F    
Sbjct: 60  AAASKLGTFNLSGYEIYTSCEPCPMCLGAIYWARLDKMYYGNNKTDAKNIGFDDSFIYDE 119


>gi|224540782|ref|ZP_03681321.1| hypothetical protein BACCELL_05696 [Bacteroides cellulosilyticus
           DSM 14838]
 gi|224517611|gb|EEF86716.1| hypothetical protein BACCELL_05696 [Bacteroides cellulosilyticus
           DSM 14838]
          Length = 155

 Score =  148 bits (375), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 39/120 (32%), Positives = 53/120 (44%), Gaps = 1/120 (0%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M K  + M  A+E +         P GAV   + +II+   NR     D TAHAE+ AIR
Sbjct: 1   MTKEEL-MRKAIELSTENVANGGGPFGAVIAKDGEIIATGTNRVTSSCDPTAHAEVSAIR 59

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
                L    L   ++Y + EPC MC  AI  AR+ ++YYG +      I     F    
Sbjct: 60  AAATSLGTFNLSGCEIYTSCEPCPMCLGAIYWARLDKMYYGNNKTDAKNIGFDDSFIYDE 119


>gi|150402044|ref|YP_001329338.1| CMP/dCMP deaminase zinc-binding [Methanococcus maripaludis C7]
 gi|150033074|gb|ABR65187.1| CMP/dCMP deaminase zinc-binding [Methanococcus maripaludis C7]
          Length = 145

 Score =  148 bits (375), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 42/141 (29%), Positives = 70/141 (49%), Gaps = 10/141 (7%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  A++EA+       IP+GAV V  NKII R  NR  +      HAE+ A+    R L
Sbjct: 4   FMDEAIKEAKLGLKEGGIPIGAVLVYKNKIIGRGHNRRVQNNSAILHAEMDALENAGR-L 62

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
           + ++    +LY TL PC MC+ A+ L +I+++  G +    G                + 
Sbjct: 63  TSDVYRNCELYTTLSPCIMCSGAVLLYKIKKVVIGENKTFLGA----EDLLLKNGV--AV 116

Query: 127 EIYPGISEQRSRQIIQDFFKE 147
           E+   ++++R  ++++DF K 
Sbjct: 117 EV---LNDERCVKMMKDFIKN 134


>gi|17230776|ref|NP_487324.1| cytosine deaminase [Nostoc sp. PCC 7120]
 gi|17132379|dbj|BAB74983.1| cytosine deaminase [Nostoc sp. PCC 7120]
          Length = 143

 Score =  148 bits (375), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 39/140 (27%), Positives = 63/140 (45%), Gaps = 12/140 (8%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           + FM  A++EA+       IP+G+V V + KI+ R  N+  + +D   HAEI  +R   R
Sbjct: 2   DEFMQAAIQEAKQGRQEGGIPIGSVLVKDGKILGRGHNKRVQDRDPVTHAEIDCLRNAGR 61

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
           I          LY TL PC +CA A+    I+++  G S    G  +            H
Sbjct: 62  I-GSYR--GTTLYSTLMPCYLCAGAVVQFGIKKVIVGESRTFPGAKDFMVS--------H 110

Query: 125 SPEIYPGISEQRSRQIIQDF 144
             E+   ++     Q++ +F
Sbjct: 111 GVEVID-LNLDECEQMMSEF 129


>gi|195056037|ref|XP_001994919.1| GH13454 [Drosophila grimshawi]
 gi|193892682|gb|EDV91548.1| GH13454 [Drosophila grimshawi]
          Length = 160

 Score =  148 bits (374), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 43/147 (29%), Positives = 75/147 (51%), Gaps = 9/147 (6%)

Query: 6   VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
            FM  AL EA+ A    E+PVG V + ++K+I+R GN     ++ T HAE + I      
Sbjct: 3   AFMEEALVEARRARDAGEVPVGCVFIHDDKVIARGGNEVNVHRNATRHAEFICIDATLAY 62

Query: 66  LSQEILP------EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
             ++ LP      E+ + VT+EPC MC+AA+    ++ + YG  N + GG ++      +
Sbjct: 63  CREKRLPARQVFSEISVVVTVEPCIMCSAALHTLAVKEIIYGCENDRFGG-KSVIDVAAV 121

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFK 146
                   I  G+  + +  ++++F+K
Sbjct: 122 --VGQRINITGGVRAEEAMTLLKEFYK 146


>gi|307154712|ref|YP_003890096.1| CMP/dCMP deaminase zinc-binding protein [Cyanothece sp. PCC 7822]
 gi|306984940|gb|ADN16821.1| CMP/dCMP deaminase zinc-binding protein [Cyanothece sp. PCC 7822]
          Length = 147

 Score =  148 bits (374), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 42/145 (28%), Positives = 66/145 (45%), Gaps = 12/145 (8%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
           K + FM  A+ EA+       IP+G+V V + +I+ R  N+  +  D   HAEI  +R  
Sbjct: 4   KIDHFMQAAIAEAKQGLQEGGIPIGSVLVKDGQIVGRGHNKRVQDNDPVTHAEIDCLRNA 63

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
            RI       +  LY TL PC +CA A+    I+R+  G S    G       F      
Sbjct: 64  GRIGQ---YGDSILYSTLMPCYLCAGAVVQFGIKRVIAGESLTFAGA----KNFMES--- 113

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKE 147
            H  E+   +  +  +Q+++DF  +
Sbjct: 114 -HGVEVID-LDLEECKQLMKDFIAK 136


>gi|307109298|gb|EFN57536.1| hypothetical protein CHLNCDRAFT_20896 [Chlorella variabilis]
          Length = 156

 Score =  148 bits (374), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 47/161 (29%), Positives = 64/161 (39%), Gaps = 24/161 (14%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNN-KIISRAGNRNRELKDVTAHAEILAIR 60
                FM  ALE+A+ A    E+PVGAV V    ++++ A N      D TAHAE+L IR
Sbjct: 6   DDDERFMRLALEQARLAFDDGEVPVGAVLVSGGGQVLAAARNAAEGAADPTAHAELLCIR 65

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF---- 116
                     L +  LYVTLEPC MCA A+   R           + G      Q     
Sbjct: 66  QAATAAGGWRLLDATLYVTLEPCPMCAGALLQVR-----------RAGLCSGVEQLQAAP 114

Query: 117 --------YTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
                         H +  +  G+       +++ FF  RR
Sbjct: 115 AAAAAVQPTRPHPFHPNMVVRRGVLAAECGDLMRSFFARRR 155


>gi|288925498|ref|ZP_06419431.1| guanine deaminase [Prevotella buccae D17]
 gi|315606630|ref|ZP_07881641.1| guanine deaminase [Prevotella buccae ATCC 33574]
 gi|288337714|gb|EFC76067.1| guanine deaminase [Prevotella buccae D17]
 gi|315251640|gb|EFU31618.1| guanine deaminase [Prevotella buccae ATCC 33574]
          Length = 155

 Score =  148 bits (374), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 41/150 (27%), Positives = 60/150 (40%), Gaps = 13/150 (8%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M K  + M  A+  ++ +      P GAV   N +I++ A N      D TAHAE+ AIR
Sbjct: 1   MDKKEL-MRRAIVLSEESVKHGGGPFGAVIARNGEIVAEASNSVTIDHDPTAHAEVNAIR 59

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF---- 116
                L    L   ++Y + EPC MC  AI  A + ++YY         I     F    
Sbjct: 60  KATSKLQNFDLEGCEIYTSCEPCPMCLGAIYWAHLDKIYYANDRKDAAKIGFDDDFIYQE 119

Query: 117 --YTLATCHHSPEIYPGISEQRSRQIIQDF 144
                A  H   EI   +    +   ++ F
Sbjct: 120 IGLKPADRHKPMEI---LLRDEA---LKAF 143


>gi|50305461|ref|XP_452690.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
 gi|49641823|emb|CAH01541.1| KLLA0C10989p [Kluyveromyces lactis]
          Length = 238

 Score =  148 bits (374), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 41/151 (27%), Positives = 73/151 (48%), Gaps = 6/151 (3%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLN--NKIISRAGNRNRELKDVTAHAEILA 58
           M +  + M  A+  A+ A    E PV  + V +  NK+I+   N   E     +HAE + 
Sbjct: 1   MSQDLLHMRTAITLAKYALDHEETPVACIFVHSKLNKVIAYGMNGTNESISGISHAEFMG 60

Query: 59  IRMGCRILSQE--ILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116
           I+        +  IL EV LYVT+EPC MCA+A+    I+++ +G  N + GG  +    
Sbjct: 61  IKQIQEKYGTDPKILSEVVLYVTVEPCIMCASALKQLGIKKVVFGCGNERFGGNGSILCI 120

Query: 117 YTLATCH--HSPEIYPGISEQRSRQIIQDFF 145
           +   + +  +     PG+  + +  +++ F+
Sbjct: 121 HNDTSTNKSNKYVSIPGVLRREAIMLLRYFY 151


>gi|296329638|ref|ZP_06872123.1| guanine deaminase [Bacillus subtilis subsp. spizizenii ATCC 6633]
 gi|305674035|ref|YP_003865707.1| guanine deaminase [Bacillus subtilis subsp. spizizenii str. W23]
 gi|296153136|gb|EFG94000.1| guanine deaminase [Bacillus subtilis subsp. spizizenii ATCC 6633]
 gi|305412279|gb|ADM37398.1| guanine deaminase [Bacillus subtilis subsp. spizizenii str. W23]
          Length = 156

 Score =  148 bits (374), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 37/115 (32%), Positives = 52/115 (45%), Gaps = 1/115 (0%)

Query: 3   KGNVFMSCALEEAQNAALRN-EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
               F+  A++ A++        P GA+ V +  II+   N      D TAHAE+ AIR 
Sbjct: 2   NHETFLKRAVDLARDGVNAGVGGPFGALIVKDGSIIAEGQNNVTTSNDPTAHAEVTAIRN 61

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116
            C+ L    L +  LY + EPC MC  AI  AR + +YY A +           F
Sbjct: 62  ACKALGTFQLDDCILYTSCEPCPMCLGAIYWARPKAVYYAAEHTDAAEAGFDDSF 116


>gi|307565561|ref|ZP_07628041.1| guanine deaminase [Prevotella amnii CRIS 21A-A]
 gi|307345720|gb|EFN91077.1| guanine deaminase [Prevotella amnii CRIS 21A-A]
          Length = 155

 Score =  147 bits (373), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 44/143 (30%), Positives = 62/143 (43%), Gaps = 6/143 (4%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M K  + M  A+E + N+      P GAV   N KII+   N+     D TAHAEI  IR
Sbjct: 1   MTKKEL-MLRAIELSINSVRNGGGPFGAVISHNGKIIAEGSNKVTINNDPTAHAEISTIR 59

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
           + C  L    L   ++Y + EPC MC  AI  A + ++YY         I     F    
Sbjct: 60  IACEKLKTFNLSGCEIYTSCEPCPMCLGAIYWAHLDKIYYANDRKDAAKIGFDDDFIYQE 119

Query: 121 TCHHSPEIYPGISEQRSRQIIQD 143
                 E+ P   ++ S  ++Q 
Sbjct: 120 -----IEVEPQYRKKPSEILLQS 137


>gi|288929191|ref|ZP_06423036.1| guanine deaminase [Prevotella sp. oral taxon 317 str. F0108]
 gi|288329293|gb|EFC67879.1| guanine deaminase [Prevotella sp. oral taxon 317 str. F0108]
          Length = 155

 Score =  147 bits (373), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 37/118 (31%), Positives = 50/118 (42%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
                M  A+  ++ +      P GAV     +II+ A NR     D TAHAE+ AIR+ 
Sbjct: 2   NNEELMRRAIALSEESVKNGGGPFGAVIARKGEIIAEAANRVTLDHDPTAHAEVSAIRLA 61

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              L    L   D+Y + EPC MC  AI  AR+  +YY  +      I     F    
Sbjct: 62  SSKLGTFNLSGCDIYTSCEPCPMCLGAIYWARLDNVYYANNREDAANIGFDDDFIYHE 119


>gi|291532926|emb|CBL06039.1| Cytosine/adenosine deaminases [Megamonas hypermegale ART12/1]
          Length = 157

 Score =  147 bits (373), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 44/117 (37%), Positives = 57/117 (48%), Gaps = 2/117 (1%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEI-PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
           M K   FM  A +EA +    NE  P GAV V + KI+ R  NR     D T HAE+ AI
Sbjct: 1   MTK-EEFMLIATQEADSNLTTNEGGPFGAVIVKDGKIVGRGHNRVLIKHDPTCHAEVEAI 59

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116
           R  C+ L    L   +LY +  PC MC +A   A I+++YYG +      I     F
Sbjct: 60  RDACQNLGTHDLTGCELYTSCYPCPMCLSATIWANIKKVYYGNTAKDADKIGFRDDF 116


>gi|218438113|ref|YP_002376442.1| CMP/dCMP deaminase zinc-binding [Cyanothece sp. PCC 7424]
 gi|218170841|gb|ACK69574.1| CMP/dCMP deaminase zinc-binding [Cyanothece sp. PCC 7424]
          Length = 147

 Score =  147 bits (373), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 41/140 (29%), Positives = 64/140 (45%), Gaps = 12/140 (8%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           + FM  A+ EA+       IP+G+V V + KI+ R  N+  +  D   HAEI  +R   R
Sbjct: 6   DSFMQAAIAEARQGLQEGGIPIGSVLVKDGKILGRGHNKRVQDNDPVTHAEIDCLRNAGR 65

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
           +       +  LY TL PC +CA A+    I+++  G S    G  E            H
Sbjct: 66  VGQ---YQDTILYSTLMPCYLCAGAVVQFGIKKVIAGESATFAGAREFMES--------H 114

Query: 125 SPEIYPGISEQRSRQIIQDF 144
             E+   ++    +Q++QDF
Sbjct: 115 GVEVID-LNLNECKQLMQDF 133


>gi|260593324|ref|ZP_05858782.1| guanine deaminase [Prevotella veroralis F0319]
 gi|260534736|gb|EEX17353.1| guanine deaminase [Prevotella veroralis F0319]
          Length = 155

 Score =  147 bits (373), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 39/143 (27%), Positives = 60/143 (41%), Gaps = 6/143 (4%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M K  + M  A+E +  +      P GA+     +II+   N      D TAHAE+ AIR
Sbjct: 1   MTKEEL-MRKAIELSIESVRNGGGPFGAIIARKGEIIAEGSNGVTIYNDPTAHAEVTAIR 59

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
             C  L    L   ++Y + EPC MC  AI  A + ++YY         I     F    
Sbjct: 60  KACEKLGTFDLTGCEIYTSCEPCPMCLGAIYWAHLDKIYYANDRKDAADIGFDDDFIYQE 119

Query: 121 TCHHSPEIYPGISEQRSRQIIQD 143
                 E+ P   ++ S  ++++
Sbjct: 120 -----IEVKPQYRKKPSEILMRE 137


>gi|260555502|ref|ZP_05827723.1| guanine deaminase [Acinetobacter baumannii ATCC 19606]
 gi|260412044|gb|EEX05341.1| guanine deaminase [Acinetobacter baumannii ATCC 19606]
          Length = 160

 Score =  147 bits (373), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 41/120 (34%), Positives = 59/120 (49%), Gaps = 1/120 (0%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           MK    F+  A+E A N   +   P GAV V + K+I+   N+     D TAHAE+LAIR
Sbjct: 1   MKANQEFLRQAIELAYNNIEKGGRPFGAVIVKDGKVIASGVNQILTTNDPTAHAELLAIR 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIE-NGTQFYTL 119
              ++L    L    ++ +  PC MC AA+ LA I+ + Y  SN  G     +  + Y  
Sbjct: 61  AASQVLGTANLEGCSVFASGHPCPMCMAAMRLAGIKTVNYAYSNEDGAPFGLSTAEIYAD 120


>gi|169633781|ref|YP_001707517.1| guanine deaminase (Guanase) (guanine aminase) (guanine
           aminohydrolase) (GAH) (GDEase) [Acinetobacter baumannii
           SDF]
 gi|169152573|emb|CAP01555.1| Guanine deaminase (Guanase) (Guanine aminase) (Guanine
           aminohydrolase) (GAH) (GDEase) [Acinetobacter baumannii]
          Length = 160

 Score =  147 bits (373), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 41/120 (34%), Positives = 59/120 (49%), Gaps = 1/120 (0%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           MK    F+  A+E A N   +   P GAV V + K+I+   N+     D TAHAE+LAIR
Sbjct: 1   MKANQEFLRQAIELAYNNIEKGGRPFGAVIVKDGKVIASGVNQILTTNDPTAHAELLAIR 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIE-NGTQFYTL 119
              ++L    L    ++ +  PC MC AA+ LA I+ + Y  SN  G     +  + Y  
Sbjct: 61  AASQVLGTANLEGCSVFASGHPCPMCMAAMRLAGIKTVNYAYSNEDGAPFGLSTAEIYAD 120


>gi|325978643|ref|YP_004288359.1| guanine deaminase [Streptococcus gallolyticus subsp. gallolyticus
           ATCC BAA-2069]
 gi|325178571|emb|CBZ48615.1| guanine deaminase [Streptococcus gallolyticus subsp. gallolyticus
           ATCC BAA-2069]
          Length = 154

 Score =  147 bits (373), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 42/155 (27%), Positives = 65/155 (41%), Gaps = 26/155 (16%)

Query: 5   NVFMSCALEEAQNAALRNEI-PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
             +M  A++EA +   + +  P G+V V + +II+   N      D TAH E+ AIR   
Sbjct: 3   EDYMQKAIQEAYDGIKKGDGGPFGSVIVKDGEIIASGHNMVLAHHDPTAHGEVTAIRKAG 62

Query: 64  RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS--------------NPKGGG 109
             L    L    L+ T EPC MC AA   A I ++YYG +              +   GG
Sbjct: 63  EKLGTHDLSGTTLFTTGEPCPMCLAACLWANIDKIYYGCTIADNAMIGFRDQRFDELMGG 122

Query: 110 IENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
            +N  + Y L   +H              ++ +D+
Sbjct: 123 RKNLPKDY-LVQLNH----------DDCLKLFKDY 146


>gi|170032967|ref|XP_001844351.1| tRNA-specific adenosine deaminase subunit TAD2 [Culex
           quinquefasciatus]
 gi|167873308|gb|EDS36691.1| tRNA-specific adenosine deaminase subunit TAD2 [Culex
           quinquefasciatus]
          Length = 165

 Score =  147 bits (372), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 50/149 (33%), Positives = 73/149 (48%), Gaps = 7/149 (4%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGC 63
           + FM  ALE+A+ A    E+PVG V V   ++II+   NR  E K+ T H E L I    
Sbjct: 2   DRFMEQALEQARLAEQLKEVPVGCVFVRGQDEIIANGCNRVNETKNATRHVEFLCIDQSL 61

Query: 64  RILSQEILPEVDLY------VTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFY 117
               Q  +P  DL+      VT+EPC MCA A+    +R + YG  N + GG        
Sbjct: 62  EYARQRDIPWEDLFREVTVVVTVEPCIMCAGALLQLGVREIIYGCGNDRFGGCGTVLDVP 121

Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDFFK 146
            L     S  I  G+  + + Q++++F+K
Sbjct: 122 GLLLEKGSLPIRGGVRAEEAMQLLREFYK 150


>gi|195391484|ref|XP_002054390.1| GJ24425 [Drosophila virilis]
 gi|194152476|gb|EDW67910.1| GJ24425 [Drosophila virilis]
          Length = 160

 Score =  147 bits (372), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 47/147 (31%), Positives = 74/147 (50%), Gaps = 9/147 (6%)

Query: 6   VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
            FM  AL EA+ A    E+PVG V V N+K+I+R GN     ++ T HAE + I      
Sbjct: 3   AFMEDALVEARRARDAGEVPVGCVFVHNDKVIARGGNEVNVHRNATRHAEFICIDATLAY 62

Query: 66  LSQEILP------EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
             ++ LP      E+ + VT+EPC MC+AA+    ++ + YG  N + GG    T     
Sbjct: 63  CREKRLPARQVFSEISVVVTVEPCIMCSAALHTLAVKEIIYGCENDRFGG---KTVIDVA 119

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFK 146
           A       I  G+  + +  ++++F+K
Sbjct: 120 AVVGQRINITGGVRSEEAMALLKEFYK 146


>gi|325279197|ref|YP_004251739.1| Guanine deaminase [Odoribacter splanchnicus DSM 20712]
 gi|324311006|gb|ADY31559.1| Guanine deaminase [Odoribacter splanchnicus DSM 20712]
          Length = 156

 Score =  147 bits (372), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 39/113 (34%), Positives = 49/113 (43%), Gaps = 1/113 (0%)

Query: 5   NVFMSCALEEAQNAALRN-EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
             FM  A+  A     +    P GAV V   KII+   N      D TAHAE+ AIR  C
Sbjct: 4   EKFMREAIRLAVENVKQGTGGPFGAVVVKEGKIIAACANTVTPDCDPTAHAEVNAIREAC 63

Query: 64  RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116
           R L    L   ++Y + EPC MC  AI  AR  R+YY ++             
Sbjct: 64  RKLDTFQLGGCEIYASCEPCPMCLGAIYWARPSRVYYASTKEDAALAGFDDSL 116


>gi|320335249|ref|YP_004171960.1| Guanine deaminase [Deinococcus maricopensis DSM 21211]
 gi|319756538|gb|ADV68295.1| Guanine deaminase [Deinococcus maricopensis DSM 21211]
          Length = 155

 Score =  147 bits (372), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 40/121 (33%), Positives = 54/121 (44%), Gaps = 1/121 (0%)

Query: 8   MSCALEEAQNAALRN-EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  A   A          P GAV V + +II+R  N      D TAHAE+ AIR     L
Sbjct: 6   MQEAARLALENVTSGHGGPFGAVIVKDGEIIARGANNVTASNDPTAHAEVTAIRAAAAKL 65

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
            +  L + ++Y + EPC MC  AI  AR++R++YG +      I    QF          
Sbjct: 66  GRFDLSDCEIYTSCEPCPMCLGAIYWARLQRVHYGCTQADADAIGFSDQFIYQELDKPKA 125

Query: 127 E 127
           E
Sbjct: 126 E 126


>gi|223937372|ref|ZP_03629277.1| CMP/dCMP deaminase zinc-binding [bacterium Ellin514]
 gi|223893923|gb|EEF60379.1| CMP/dCMP deaminase zinc-binding [bacterium Ellin514]
          Length = 155

 Score =  147 bits (372), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 44/117 (37%), Positives = 61/117 (52%), Gaps = 3/117 (2%)

Query: 1   MKKGNVFMSCALEEAQNAALRN-EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
           M K   +M  A+  +     R    P GAV V N KI+ R  N+     D TAHAE++AI
Sbjct: 1   MNK--KYMQEAVRISIRMMRRGIGGPFGAVVVKNGKIVGRGCNQVTSTNDPTAHAEVVAI 58

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116
           R  C+ L    L + +LY + EPC MC +AI  AR++++YYG +      IE    F
Sbjct: 59  RDACKRLKTFQLDDCELYTSCEPCPMCLSAIYWARLKKVYYGNTRKDAAEIEFDDDF 115


>gi|81298931|ref|YP_399139.1| cytosine/adenosine deaminase-like [Synechococcus elongatus PCC
           7942]
 gi|81167812|gb|ABB56152.1| Cytosine/adenosine deaminases-like [Synechococcus elongatus PCC
           7942]
          Length = 161

 Score =  147 bits (372), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 37/103 (35%), Positives = 52/103 (50%), Gaps = 2/103 (1%)

Query: 3   KGNVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +   FM  A+  ++ A L +    P G V   N +II+   N+    +D T HAEI AIR
Sbjct: 5   EDERFMRRAIALSRQAGLIDCTGGPFGCVITRNGEIIAEGFNQVLTERDPTWHAEIAAIR 64

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
             C+ L    L    LY + EPC MCAAA+  A++ RL +   
Sbjct: 65  QACQHLQTVDLSGCTLYTSAEPCPMCAAAVYWAKLDRLVFATR 107


>gi|260909908|ref|ZP_05916596.1| guanine deaminase [Prevotella sp. oral taxon 472 str. F0295]
 gi|260635953|gb|EEX53955.1| guanine deaminase [Prevotella sp. oral taxon 472 str. F0295]
          Length = 155

 Score =  147 bits (372), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 38/116 (32%), Positives = 53/116 (45%), Gaps = 1/116 (0%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M    + M  A+  ++ +      P GAV   N +I++ A NR     D TAHAE+ AIR
Sbjct: 1   MNNKEL-MRRAIALSEESVKNGGGPFGAVIARNGEIVAEAANRVTLDHDPTAHAEVSAIR 59

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116
           +  R L    L   D+Y + EPC MC  AI  A +  +YY  +      I     F
Sbjct: 60  LASRKLGTFNLSGCDIYTSCEPCPMCLGAIYWAHLDNIYYANNREDAANIGFDDDF 115


>gi|75911133|ref|YP_325429.1| cytidine/deoxycytidylate deaminase [Anabaena variabilis ATCC 29413]
 gi|75704858|gb|ABA24534.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [Anabaena
           variabilis ATCC 29413]
          Length = 143

 Score =  146 bits (371), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 39/143 (27%), Positives = 63/143 (44%), Gaps = 12/143 (8%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           + FM  A++EA        IP+G+V V + KI+ R  N+  + +D   HAEI  +R   R
Sbjct: 2   DEFMQVAIQEATQGRQEGGIPIGSVLVKDGKILGRGHNKRVQDRDPVTHAEIDCLRNAGR 61

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
           I          LY TL PC +CA A+    I+++  G S    G  +            H
Sbjct: 62  I-GSYR--GTTLYSTLMPCYLCAGAVVQFGIKKVIVGESRTFPGAKDFMVS--------H 110

Query: 125 SPEIYPGISEQRSRQIIQDFFKE 147
             E+   ++     Q++ +F + 
Sbjct: 111 GVEVID-LNLDECEQMMSEFIQA 132


>gi|186682609|ref|YP_001865805.1| CMP/dCMP deaminase, zinc-binding [Nostoc punctiforme PCC 73102]
 gi|186465061|gb|ACC80862.1| CMP/dCMP deaminase, zinc-binding [Nostoc punctiforme PCC 73102]
          Length = 141

 Score =  146 bits (371), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 40/142 (28%), Positives = 63/142 (44%), Gaps = 8/142 (5%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
             FM  AL +A+      + P GAV V +N++++ A N      D +AHAEI  IR    
Sbjct: 4   EYFMRLALAQAK----EGDTPYGAVIVKDNEVVAVAHNTVSRDNDPSAHAEINVIRSLTA 59

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI-ENGTQFY---TLA 120
            L    L    +Y T EPC MCA A   + +  + YGAS      I ++         +A
Sbjct: 60  KLKNHFLEGYSIYTTCEPCPMCATACVWSGLSEIVYGASIQDLISINQSQINLSCEEVIA 119

Query: 121 TCHHSPEIYPGISEQRSRQIIQ 142
               + ++  GI +    ++ +
Sbjct: 120 KSFRNIKVTKGILKNECLELFK 141


>gi|195443952|ref|XP_002069651.1| GK11635 [Drosophila willistoni]
 gi|194165736|gb|EDW80637.1| GK11635 [Drosophila willistoni]
          Length = 160

 Score =  146 bits (371), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 46/147 (31%), Positives = 72/147 (48%), Gaps = 9/147 (6%)

Query: 6   VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
            FM  AL EA+ A    E+PVG V V  +K+I+R GN     ++ T HAE + I      
Sbjct: 3   AFMEDALVEARRARDAGEVPVGCVFVYGDKVIARGGNEVNVYRNATRHAEFICIDATLAY 62

Query: 66  LSQEILP------EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
             ++ LP      E+ + VT+EPC MC+AA+    ++ + YG  N + GG    T     
Sbjct: 63  CREKHLPARQLFAEISVVVTVEPCIMCSAALHTLGVKEIIYGCENDRFGG---KTVVDVA 119

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFK 146
           A       I  G+    +  ++++F+K
Sbjct: 120 AVVGQRISIIGGVRGDEAMALLKEFYK 146


>gi|306831703|ref|ZP_07464860.1| guanine deaminase [Streptococcus gallolyticus subsp. gallolyticus
           TX20005]
 gi|304426128|gb|EFM29243.1| guanine deaminase [Streptococcus gallolyticus subsp. gallolyticus
           TX20005]
          Length = 172

 Score =  146 bits (371), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 42/155 (27%), Positives = 65/155 (41%), Gaps = 26/155 (16%)

Query: 5   NVFMSCALEEAQNAALRNEI-PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
             +M  A++EA +   + +  P G+V V + +II+   N      D TAH E+ AIR   
Sbjct: 21  EDYMQKAIQEAYDGIKKGDGGPFGSVIVKDGEIIASGHNMVLAHHDPTAHGEVTAIRKAG 80

Query: 64  RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS--------------NPKGGG 109
             L    L    L+ T EPC MC AA   A I ++YYG +              +   GG
Sbjct: 81  EKLGTHDLSGTTLFTTGEPCPMCLAACLWANIDKIYYGCTIADNAMIGFRDQRFDELMGG 140

Query: 110 IENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
            +N  + Y L   +H              ++ +D+
Sbjct: 141 RKNLPKDY-LVQLNH----------DDCLKLFKDY 164


>gi|42521730|ref|NP_967110.1| cytidine/deoxycytidylate deaminase family protein [Bdellovibrio
           bacteriovorus HD100]
 gi|39574260|emb|CAE77764.1| cytidine/deoxycytidylate deaminase family protein [Bdellovibrio
           bacteriovorus HD100]
          Length = 155

 Score =  146 bits (371), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 44/121 (36%), Positives = 58/121 (47%), Gaps = 3/121 (2%)

Query: 1   MKKGNVFMSCALEEAQNAALRN-EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
           M K   FM  A+E ++N        P GAV V + KII    N+     D TAHAE+ AI
Sbjct: 1   MNK--EFMLRAIELSRNNMRAGAGGPFGAVIVKDGKIIGEGWNKVTSSNDPTAHAEVSAI 58

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
           R  C  +S   L   ++Y + EPC MC +AI  ARI ++YYG +      I     F   
Sbjct: 59  RDACSKISNFELAGAEIYTSCEPCPMCLSAIYWARIEKIYYGNTRKDAAEINFDDDFLYQ 118

Query: 120 A 120
            
Sbjct: 119 E 119


>gi|258593876|emb|CBE70217.1| Cytosine deaminase (Cytosine aminohydrolase) [NC10 bacterium 'Dutch
           sediment']
          Length = 154

 Score =  146 bits (371), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 38/148 (25%), Positives = 66/148 (44%), Gaps = 14/148 (9%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           +    F+  A E+A+ +     +P+GAV V N+ +I+   NR  +  D TAH E+  +R 
Sbjct: 6   ETHQRFIRAAFEQARKSYNEGGLPIGAVMVENSTVIAVGHNRRVQDGDPTAHGEMDCLRQ 65

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
             R   +     + LY TL PC MC+  +    I+R+  G      G +E          
Sbjct: 66  AGR---RPRYDGITLYTTLSPCMMCSGTVLQFGIKRVVIGEKQNFPGNVELLR------- 115

Query: 122 CHHSPEIYPGISEQ-RSRQIIQDFFKER 148
            +H  ++   + +      ++Q F +ER
Sbjct: 116 -NHGVDVI--VLDDPECISLMQRFMRER 140


>gi|332874597|ref|ZP_08442498.1| putative guanine deaminase [Acinetobacter baumannii 6014059]
 gi|322507943|gb|ADX03397.1| guaD [Acinetobacter baumannii 1656-2]
 gi|323517535|gb|ADX91916.1| CMP/dCMP deaminase zinc-binding protein [Acinetobacter baumannii
           TCDC-AB0715]
 gi|332737235|gb|EGJ68161.1| putative guanine deaminase [Acinetobacter baumannii 6014059]
          Length = 160

 Score =  146 bits (371), Expect = 8e-34,   Method: Composition-based stats.
 Identities = 41/120 (34%), Positives = 59/120 (49%), Gaps = 1/120 (0%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           MK    F+  A+E A N   +   P GAV V + K+I+   N+     D TAHAE+LAIR
Sbjct: 1   MKANQEFLRQAIELAYNNIEKGGRPFGAVIVKDGKVIASGVNQILTTNDPTAHAELLAIR 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIE-NGTQFYTL 119
              ++L    L    ++ +  PC MC AA+ LA I+ + Y  SN  G     +  + Y  
Sbjct: 61  AASQVLGTANLEGCSVFASGHPCPMCMAAMRLAGIKTVNYAYSNEDGAPFGLSTAEIYAD 120


>gi|325298986|ref|YP_004258903.1| Guanine deaminase [Bacteroides salanitronis DSM 18170]
 gi|324318539|gb|ADY36430.1| Guanine deaminase [Bacteroides salanitronis DSM 18170]
          Length = 155

 Score =  146 bits (370), Expect = 8e-34,   Method: Composition-based stats.
 Identities = 45/127 (35%), Positives = 56/127 (44%), Gaps = 6/127 (4%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M K  + M  A+E +         P GAV   N +IIS   NR     D TAHAE+ AIR
Sbjct: 1   MTKEEL-MRKAIELSVRNVAEGGGPFGAVIARNGEIISTGTNRVTPDHDPTAHAEVSAIR 59

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQ---FY 117
             CR L    L   ++Y + EPC MC  AI  A + R+YYG  N K      G      Y
Sbjct: 60  AACRELGTFDLSGCEIYTSCEPCPMCLGAIYWAHLDRMYYG--NDKHDAARIGFDDAFIY 117

Query: 118 TLATCHH 124
                + 
Sbjct: 118 KELELNP 124


>gi|169796435|ref|YP_001714228.1| guanine deaminase (Guanase) (guanine aminase) (guanine
           aminohydrolase) (GAH) (GDEase) [Acinetobacter baumannii
           AYE]
 gi|213156454|ref|YP_002318874.1| guanine deaminase [Acinetobacter baumannii AB0057]
 gi|215483897|ref|YP_002326122.1| Guanine deaminase(Guanase) [Acinetobacter baumannii AB307-0294]
 gi|301347084|ref|ZP_07227825.1| Guanine deaminase(Guanase) [Acinetobacter baumannii AB056]
 gi|301512279|ref|ZP_07237516.1| Guanine deaminase(Guanase) [Acinetobacter baumannii AB058]
 gi|301596132|ref|ZP_07241140.1| Guanine deaminase(Guanase) [Acinetobacter baumannii AB059]
 gi|332854738|ref|ZP_08435516.1| putative guanine deaminase [Acinetobacter baumannii 6013150]
 gi|332865718|ref|ZP_08436528.1| putative guanine deaminase [Acinetobacter baumannii 6013113]
 gi|169149362|emb|CAM87246.1| Guanine deaminase (Guanase) (Guanine aminase) (Guanine
           aminohydrolase) (GAH) (GDEase) [Acinetobacter baumannii
           AYE]
 gi|213055614|gb|ACJ40516.1| guanine deaminase [Acinetobacter baumannii AB0057]
 gi|213986575|gb|ACJ56874.1| Guanine deaminase(Guanase) [Acinetobacter baumannii AB307-0294]
 gi|332727824|gb|EGJ59227.1| putative guanine deaminase [Acinetobacter baumannii 6013150]
 gi|332735145|gb|EGJ66227.1| putative guanine deaminase [Acinetobacter baumannii 6013113]
          Length = 160

 Score =  146 bits (370), Expect = 8e-34,   Method: Composition-based stats.
 Identities = 41/120 (34%), Positives = 59/120 (49%), Gaps = 1/120 (0%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           MK    F+  A+E A N   +   P GAV V + K+I+   N+     D TAHAE+LAIR
Sbjct: 1   MKANQEFLRQAIELAYNNIEKGGRPFGAVIVKDGKVIASGVNQILTTNDPTAHAELLAIR 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIE-NGTQFYTL 119
              ++L    L    ++ +  PC MC AA+ LA I+ + Y  SN  G     +  + Y  
Sbjct: 61  TASQVLGTANLEGCSVFASGHPCPMCMAAMRLAGIKTVNYAYSNEDGAPFGLSTAEIYAD 120


>gi|56751392|ref|YP_172093.1| hypothetical protein syc1383_d [Synechococcus elongatus PCC 6301]
 gi|56686351|dbj|BAD79573.1| hypothetical protein [Synechococcus elongatus PCC 6301]
          Length = 161

 Score =  146 bits (370), Expect = 9e-34,   Method: Composition-based stats.
 Identities = 37/103 (35%), Positives = 52/103 (50%), Gaps = 2/103 (1%)

Query: 3   KGNVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +   FM  A+  ++ A L +    P G V   N +II+   N+    +D T HAEI AIR
Sbjct: 5   EDERFMRRAIALSRQAGLIDCTGGPFGCVITRNGEIIAEGFNQVLTERDPTWHAEIAAIR 64

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
             C+ L    L    LY + EPC MCAAA+  A++ RL +   
Sbjct: 65  QACQHLQTVDLSGCTLYTSAEPCPMCAAAVYWAKLERLVFATR 107


>gi|209964980|ref|YP_002297895.1| guanine deaminase [Rhodospirillum centenum SW]
 gi|209958446|gb|ACI99082.1| guanine deaminase [Rhodospirillum centenum SW]
          Length = 158

 Score =  146 bits (370), Expect = 9e-34,   Method: Composition-based stats.
 Identities = 44/135 (32%), Positives = 59/135 (43%), Gaps = 11/135 (8%)

Query: 3   KGNVFMSCALEEAQNAALRN-EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           +  +F+  A E A++        P GAV VL+  ++    NR     D TAHAEI+AIR 
Sbjct: 4   QDALFLRRAAELARHGMDAGAGGPFGAVIVLDGTVVGEGWNRVTSSNDPTAHAEIVAIRE 63

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA- 120
            C  L +  L    +Y + EPC MC AAI  AR+ RL Y  +  +   I           
Sbjct: 64  ACARLGRFDLRGATVYSSCEPCPMCLAAIHWARLDRLVYANTRDEAAAIGFDDALIYDQI 123

Query: 121 ---------TCHHSP 126
                     CHH P
Sbjct: 124 PLPPAQRRLPCHHHP 138


>gi|194476730|ref|YP_002048909.1| cytidine/deoxycytidylate deaminase family protein [Paulinella
           chromatophora]
 gi|171191737|gb|ACB42699.1| cytidine/deoxycytidylate deaminase family protein [Paulinella
           chromatophora]
          Length = 157

 Score =  146 bits (370), Expect = 9e-34,   Method: Composition-based stats.
 Identities = 37/150 (24%), Positives = 69/150 (46%), Gaps = 1/150 (0%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAI 59
           +     +MS  L          ++P+ AV +    + +    N   + +D   HAE++A+
Sbjct: 6   LDTYRYWMSRLLRCVSRMKTDCDVPIAAVILNGAGQCVGWGRNSREKNQDPMGHAELIAL 65

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
           R    +       +  L VTLEPC MCA A+  AR++ + YG+ + K G +         
Sbjct: 66  RQAAVLRGSWRFDDCTLIVTLEPCPMCAGALVQARMKFVVYGSYDYKRGALGGTVDLSNH 125

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
           A+ HH  +   G+    + ++++ +F+ RR
Sbjct: 126 ASAHHYMKTKGGLEGTLASEVLETWFRRRR 155


>gi|116250294|ref|YP_766132.1| purine deaminase [Rhizobium leguminosarum bv. viciae 3841]
 gi|115254942|emb|CAK06016.1| putative purine deaminase [Rhizobium leguminosarum bv. viciae 3841]
          Length = 156

 Score =  146 bits (370), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 36/149 (24%), Positives = 67/149 (44%), Gaps = 4/149 (2%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M+    F+  A+  +++A    + P G++ V + ++I RA N      D+T HAE+  ++
Sbjct: 1   MENHEPFLREAIALSRSAVENGDEPFGSLLVKDGEVILRAENSVFTGHDMTNHAEMNLVK 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI-ENGTQFYTL 119
           +  +      L +  LY + EPC MC+ AI  + I R+ +  S  + G I   G    + 
Sbjct: 61  LAAQHYDTAFLADCTLYTSTEPCAMCSGAIYWSGIGRMVFACSEARLGEIAGIGLNVPSR 120

Query: 120 ATCH---HSPEIYPGISEQRSRQIIQDFF 145
           A          +     E  +  + Q+F+
Sbjct: 121 AVLQTGARIVTVVGPNLEDEAAAVHQEFW 149


>gi|167041893|gb|ABZ06633.1| putative cytidine and deoxycytidylate deaminase zinc-binding region
           [uncultured marine microorganism HF4000_133G03]
          Length = 149

 Score =  146 bits (370), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 40/140 (28%), Positives = 63/140 (45%), Gaps = 6/140 (4%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M+ A+E +  +      P G+V V + KII+   N+     D TAH EI+AIR  C+ L+
Sbjct: 1   MTRAIELSIESVNTGGGPFGSVIVKDEKIIAEGFNKVTSTNDPTAHGEIVAIRKACKSLN 60

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC-HHSP 126
              L   +LY T EPC MC +AI  A I ++YY  +      I+            +   
Sbjct: 61  NFNLSGCELYSTCEPCPMCLSAIYWAHIDKVYYANTRDDAKKIDFDDSLIYSELLKNVKI 120

Query: 127 EIYP--GISEQRSRQIIQDF 144
              P   +  + +   ++ F
Sbjct: 121 RKIPMAQMMREEA---LKAF 137


>gi|291515557|emb|CBK64767.1| Cytosine/adenosine deaminases [Alistipes shahii WAL 8301]
          Length = 148

 Score =  146 bits (369), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 54/148 (36%), Positives = 76/148 (51%), Gaps = 5/148 (3%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           +    FM  AL EAQ A  + E+P+GAV V    +I R  N    L D TAHAE+ A+  
Sbjct: 5   ETDEKFMRLALNEAQKALKQQEVPIGAVVVAGGAVIGRGHNLVETLADPTAHAEMQALTA 64

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
               L  + L E  LYVT+EPC MCA AI  A++ R+ +GA +PK G      + Y+ A 
Sbjct: 65  AAATLGGKYLQECTLYVTVEPCIMCAGAIGWAQVSRVVWGADDPKKG-----FRRYSEAV 119

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
            H    +  G+  +   +++  FF   R
Sbjct: 120 FHPRTTVARGVLREECEELMSGFFAGLR 147


>gi|119509403|ref|ZP_01628552.1| cytosine deaminase [Nodularia spumigena CCY9414]
 gi|119466017|gb|EAW46905.1| cytosine deaminase [Nodularia spumigena CCY9414]
          Length = 143

 Score =  146 bits (369), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 38/140 (27%), Positives = 61/140 (43%), Gaps = 12/140 (8%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           + FM  A+ +A+       IP+G+V V + KII R  N+  +  D   HAEI  +R   R
Sbjct: 2   DEFMEAAIAQAKQGRKEGGIPIGSVLVKDGKIIGRGHNKRVQDNDPVTHAEIDCLRNAGR 61

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
           +          LY TL PC +CA A+    I+++  G S    G  +            H
Sbjct: 62  V-GSYR--GTTLYSTLMPCYLCAGAVVQFGIKKVIAGESRTFPGAKDFMVS--------H 110

Query: 125 SPEIYPGISEQRSRQIIQDF 144
             E+   ++     Q++ +F
Sbjct: 111 GVEVID-LNLDECEQMMSEF 129


>gi|194334351|ref|YP_002016211.1| CMP/dCMP deaminase [Prosthecochloris aestuarii DSM 271]
 gi|194312169|gb|ACF46564.1| CMP/dCMP deaminase zinc-binding [Prosthecochloris aestuarii DSM
           271]
          Length = 155

 Score =  146 bits (369), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 35/114 (30%), Positives = 52/114 (45%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           F+  AL  A         P GA+ V N ++++   NR     D T+HAE+ AIR   + L
Sbjct: 6   FLDRALALAVENVAAGGGPFGALIVRNGEVVATGVNRVTRENDPTSHAEVNAIRAASQKL 65

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
               L   +LY + EPC MC  AI  A +  +YYGA + +        ++    
Sbjct: 66  KTFKLEGCELYSSCEPCPMCMGAIYWAGVTTVYYGADSDEAAVAGFDDRYIYDE 119


>gi|193076995|gb|ABO11743.2| CMP/dCMP deaminase zinc-binding [Acinetobacter baumannii ATCC
           17978]
          Length = 160

 Score =  146 bits (369), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 41/120 (34%), Positives = 60/120 (50%), Gaps = 1/120 (0%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           MK    F+  A+E A N   +   P GAV V + K+I+   N+     D TAHAE+LAIR
Sbjct: 1   MKANQEFLRQAIELAYNNIEKGGRPFGAVIVKDGKVIASGVNQILTTNDPTAHAELLAIR 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIE-NGTQFYTL 119
           +  ++L    L    ++ +  PC MC AA+ LA I+ + Y  SN  G     +  + Y  
Sbjct: 61  VASQVLGTANLEGCSVFASGHPCPMCMAAMRLAGIKTVNYAYSNEDGAPFGLSTAEIYAD 120


>gi|282880633|ref|ZP_06289339.1| guanine deaminase [Prevotella timonensis CRIS 5C-B1]
 gi|281305528|gb|EFA97582.1| guanine deaminase [Prevotella timonensis CRIS 5C-B1]
          Length = 156

 Score =  146 bits (369), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 40/145 (27%), Positives = 61/145 (42%), Gaps = 10/145 (6%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M + ++ M  A+  ++ + L    P GAV      II+ A N      D TAHAE+ AIR
Sbjct: 2   MNQKDI-MRRAIALSEESVLSGGGPFGAVIAKGGNIIAEASNTVTIDHDPTAHAEVNAIR 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF---- 116
              + L    L   D+Y + EPC MC  AI  A + R++Y  +      I     F    
Sbjct: 61  KATQKLGTFDLTGCDIYTSCEPCPMCLGAIYWAHLDRIFYANNRKDAARIGFDDDFIYQE 120

Query: 117 --YTLATCHHSPEIYPGISEQRSRQ 139
              + A  H    +   +    +R+
Sbjct: 121 IALSPAERHKQMRV---LLPDEARK 142


>gi|186686613|ref|YP_001869809.1| CMP/dCMP deaminase, zinc-binding [Nostoc punctiforme PCC 73102]
 gi|186469065|gb|ACC84866.1| CMP/dCMP deaminase, zinc-binding [Nostoc punctiforme PCC 73102]
          Length = 143

 Score =  146 bits (369), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 39/140 (27%), Positives = 62/140 (44%), Gaps = 12/140 (8%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           + FM  A++EA+       IP+G+V V + KI+ R  N+  +  D   HAEI  +R   R
Sbjct: 2   DEFMEAAIQEAKQGREEGGIPIGSVLVKDGKILGRGHNKRVQDGDPVTHAEIDCLRNAGR 61

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
           +          LY TL PC +CA A+    I+++  G S    G  E            H
Sbjct: 62  V-GSYR--GTTLYSTLMPCYLCAGAVVQFGIKKVIVGESQTFPGAKEFMVS--------H 110

Query: 125 SPEIYPGISEQRSRQIIQDF 144
             E+   ++     Q++ +F
Sbjct: 111 GVEVID-LNLDDCEQMMSEF 129


>gi|156087547|ref|XP_001611180.1| cytosine deaminase [Babesia bovis T2Bo]
 gi|154798434|gb|EDO07612.1| cytosine deaminase, putative [Babesia bovis]
          Length = 191

 Score =  146 bits (369), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 46/159 (28%), Positives = 69/159 (43%), Gaps = 20/159 (12%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNK--IISRAGNRNRELKDVTAHAEILAIR-- 60
           + FM+ AL+EA++A  R E+ VG V V   K  I++RAGN   +  + T H E  AI   
Sbjct: 8   DNFMTAALDEARDALERGEVAVGCVIVDKEKKTIVARAGNSTNQKHNSTWHCEFGAIDTL 67

Query: 61  -------------MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKG 107
                                       L+VT EPC MCA A+ +  +  +YYG  N K 
Sbjct: 68  FSLVPDGKIGANDQANIQAFTSRYA---LFVTCEPCIMCATALHIVGLTDIYYGCDNEKF 124

Query: 108 GGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
           GG  +    +           + GI  + + Q++Q F+ 
Sbjct: 125 GGCGSVLSLHEGYGDFPPLNCHKGIRAEEAIQLLQTFYA 163


>gi|254520799|ref|ZP_05132855.1| CMP/dCMP deaminase [Clostridium sp. 7_2_43FAA]
 gi|226914548|gb|EEH99749.1| CMP/dCMP deaminase [Clostridium sp. 7_2_43FAA]
          Length = 147

 Score =  146 bits (369), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 47/158 (29%), Positives = 67/158 (42%), Gaps = 31/158 (19%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKI---------------ISRAGNRNRELKDVT 51
           +M  A+ EA+NA                 I               I+   N   +LK  T
Sbjct: 3   YMDLAINEAKNAY---------------NIGEVPVGVVVVKDGEVIASQHNLKEKLKLTT 47

Query: 52  AHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIE 111
           AHAEILAI   C+ L+   L   ++YVTLEPC MCAAAI+ +RI RL+ G  N   G   
Sbjct: 48  AHAEILAIEEACKKLNNWRLSGCEMYVTLEPCPMCAAAIAQSRISRLFIGTFNKDMGACG 107

Query: 112 NGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
           +          +   ++      Q    ++  FF ++R
Sbjct: 108 STINLIDYNIFNWHVDVKW-CYNQECSDLLTSFFIKQR 144


>gi|313146154|ref|ZP_07808347.1| cytidine/deoxycytidylate deaminase [Bacteroides fragilis 3_1_12]
 gi|313134921|gb|EFR52281.1| cytidine/deoxycytidylate deaminase [Bacteroides fragilis 3_1_12]
          Length = 155

 Score =  145 bits (368), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 38/120 (31%), Positives = 53/120 (44%), Gaps = 1/120 (0%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M K  + M  A+E ++        P GAV   + +I+    NR     D TAHAE+ AIR
Sbjct: 1   MTKEEL-MRKAIELSRENVANGGGPFGAVIAKDGEIVVTGVNRVTASCDPTAHAEVTAIR 59

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
                L    L   ++Y + EPC MC  AI  AR+ ++YYG +      I     F    
Sbjct: 60  AAASKLGTFNLSGYEIYTSCEPCPMCLGAIYWARLDKMYYGNNKTDAKNIGFDDSFIYDE 119


>gi|300113843|ref|YP_003760418.1| CMP/dCMP deaminase zinc-binding protein [Nitrosococcus watsonii
           C-113]
 gi|299539780|gb|ADJ28097.1| CMP/dCMP deaminase zinc-binding protein [Nitrosococcus watsonii
           C-113]
          Length = 155

 Score =  145 bits (368), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 44/110 (40%), Positives = 54/110 (49%), Gaps = 1/110 (0%)

Query: 4   GNVFMSCALEEAQNAALRN-EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
              FM+ A+  A          P GAV V + +I+ RA N    L+D TAHAE+ AIRM 
Sbjct: 2   HARFMAEAISLASKGMGDGLGGPFGAVVVRDGEILGRACNDVIALRDPTAHAEVQAIRMA 61

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN 112
           CR L+   L    LY + EPC MC  A   ARI R+YY A       I  
Sbjct: 62  CRNLNDFHLEGCTLYCSCEPCPMCLGAAYWARIARIYYAAGQEDAAHIGF 111


>gi|56697818|ref|YP_168189.1| cytidine and deoxycytidylate deaminase family protein [Ruegeria
           pomeroyi DSS-3]
 gi|56679555|gb|AAV96221.1| cytidine and deoxycytidylate deaminase family protein [Ruegeria
           pomeroyi DSS-3]
          Length = 159

 Score =  145 bits (368), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 72/143 (50%), Positives = 99/143 (69%), Gaps = 1/143 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  AL EA+ A  R E+PVGAV V  + ++++ AGNR RE  D TAHAEI+A+R  C   
Sbjct: 7   MDQALAEARAAGARGEVPVGAVIVAPDGRVVAAAGNRTRETCDPTAHAEIVALRAACAAA 66

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
             E L   DLYVTLEPC MCAAA++ ARIRR+YYGA++PK GG+ +G + ++    HH+P
Sbjct: 67  GSERLVGHDLYVTLEPCAMCAAALAAARIRRVYYGAADPKSGGVAHGARVFSHPQAHHAP 126

Query: 127 EIYPGISEQRSRQIIQDFFKERR 149
           E+Y GI  + + ++++ FF ERR
Sbjct: 127 EVYDGIGGEAAAELLRGFFAERR 149


>gi|184157635|ref|YP_001845974.1| cytosine/adenosine deaminase [Acinetobacter baumannii ACICU]
 gi|183209229|gb|ACC56627.1| Cytosine/adenosine deaminase [Acinetobacter baumannii ACICU]
          Length = 158

 Score =  145 bits (368), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 41/120 (34%), Positives = 59/120 (49%), Gaps = 1/120 (0%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           MK    F+  A+E A N   +   P GAV V + K+I+   N+     D TAHAE+LAIR
Sbjct: 1   MKANQEFLRQAIELAYNNIEKGGRPFGAVIVKDGKVIASGVNQILTTNDPTAHAELLAIR 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIE-NGTQFYTL 119
              ++L    L    ++ +  PC MC AA+ LA I+ + Y  SN  G     +  + Y  
Sbjct: 61  AASQVLGTANLEGCSVFASGHPCPMCMAAMRLAGIKTVNYAYSNEDGAPFGLSTAEIYAD 120


>gi|288561455|ref|YP_003424941.1| CMP/dCMP deaminase [Methanobrevibacter ruminantium M1]
 gi|288544165|gb|ADC48049.1| CMP/dCMP deaminase [Methanobrevibacter ruminantium M1]
          Length = 155

 Score =  145 bits (367), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 43/141 (30%), Positives = 69/141 (48%), Gaps = 10/141 (7%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
              FM  A++EA+ ++    +P+GAV V  N+IISR  NR  +      HAE+ AI    
Sbjct: 2   HQKFMEEAIKEAEISSKEGGLPIGAVLVKENQIISRGHNRLIQKDSSILHAEMDAIENAG 61

Query: 64  RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123
           R L+ E   +  LY TL PC MC+ A+ L  I R+  G +    G  +            
Sbjct: 62  R-LNHEDYQKCTLYTTLSPCPMCSGAVILYNIPRVVIGDNQTLMGAEKLLKD-------- 112

Query: 124 HSPEIYPGISEQRSRQIIQDF 144
           +  EI   +++ + +++ +DF
Sbjct: 113 NGVEIIV-LNDDKCKELFEDF 132


>gi|320451012|ref|YP_004203108.1| tRNA(Ile)-lysidine synthase [Thermus scotoductus SA-01]
 gi|320151181|gb|ADW22559.1| tRNA(Ile)-lysidine synthase [Thermus scotoductus SA-01]
          Length = 514

 Score =  145 bits (367), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 50/148 (33%), Positives = 72/148 (48%), Gaps = 16/148 (10%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
            +   +M+ ALEEA+ A    E+PVGAV V+  + + RA N+    +D TAHAE+L +R 
Sbjct: 377 SEEERYMALALEEARQAFQEGEVPVGAVLVV-GERVYRAHNQVEATRDPTAHAEMLLLRE 435

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
             R      L     YVTLEPC MC  A+  A +  + YG  N K G +   T+F     
Sbjct: 436 VGRGARGGRL-----YVTLEPCRMCHHALREAGV-EVVYGVENLKEGAL---TRFGQGEG 486

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
                    G+ E    ++++ FF   R
Sbjct: 487 L------RGGVLEGECAKLLKGFFARLR 508


>gi|3204108|emb|CAA07230.1| putative cytidine deaminase [Cicer arietinum]
          Length = 186

 Score =  145 bits (367), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 42/112 (37%), Positives = 60/112 (53%), Gaps = 1/112 (0%)

Query: 2   KKGNVFMSCALEEAQNAALRNEI-PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
            + + F+  A+EEA       +  P GAV V N+++++   N      D TAHAE+ AIR
Sbjct: 29  DRDHKFLRKAVEEAYKGVDCGDGGPFGAVIVHNDEVVASCHNMVLNYTDPTAHAEVTAIR 88

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN 112
             C+ L Q  L + ++Y + EPC MC  AI L+RI+RL YGA       I  
Sbjct: 89  EACKKLKQIELSDCEIYASCEPCPMCFGAIHLSRIKRLVYGAKAEAAIAIGF 140


>gi|134097849|ref|YP_001103510.1| guanine deaminase [Saccharopolyspora erythraea NRRL 2338]
 gi|133910472|emb|CAM00585.1| guanine deaminase [Saccharopolyspora erythraea NRRL 2338]
          Length = 162

 Score =  145 bits (367), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 33/94 (35%), Positives = 49/94 (52%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M+ A+E A  +      P GAV V + +I++   N+     D TAHAE++AIR  C+ L
Sbjct: 13  WMARAIELATRSVADGGGPFGAVVVKDGEIVATGHNQVTTNLDPTAHAEVVAIRNACQAL 72

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
               L    L  + EPC MC A+   AR+  + Y
Sbjct: 73  GTFKLDGCVLVTSCEPCPMCMASALWARMESVVY 106


>gi|237715975|ref|ZP_04546456.1| cytidine/deoxycytidylate deaminase [Bacteroides sp. D1]
 gi|237722247|ref|ZP_04552728.1| cytidine/deoxycytidylate deaminase [Bacteroides sp. 2_2_4]
 gi|262407589|ref|ZP_06084137.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
 gi|294645725|ref|ZP_06723411.1| guanine deaminase [Bacteroides ovatus SD CC 2a]
 gi|294808352|ref|ZP_06767107.1| guanine deaminase [Bacteroides xylanisolvens SD CC 1b]
 gi|229443622|gb|EEO49413.1| cytidine/deoxycytidylate deaminase [Bacteroides sp. D1]
 gi|229448057|gb|EEO53848.1| cytidine/deoxycytidylate deaminase [Bacteroides sp. 2_2_4]
 gi|262354397|gb|EEZ03489.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
 gi|292638931|gb|EFF57263.1| guanine deaminase [Bacteroides ovatus SD CC 2a]
 gi|294444428|gb|EFG13140.1| guanine deaminase [Bacteroides xylanisolvens SD CC 1b]
 gi|295085135|emb|CBK66658.1| Cytosine/adenosine deaminases [Bacteroides xylanisolvens XB1A]
          Length = 156

 Score =  145 bits (367), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 38/121 (31%), Positives = 53/121 (43%), Gaps = 2/121 (1%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVA-VLNNKIISRAGNRNRELKDVTAHAEILAI 59
           M K    M  A+E ++        P GAV    + +I++   NR     D TAHAE+ AI
Sbjct: 1   MTK-EALMRKAIELSKENVENGGGPFGAVIATKDGEIVATGVNRVTASCDPTAHAEVSAI 59

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
           R     L    L   ++Y + EPC MC  AI  AR+ ++YYG +      I     F   
Sbjct: 60  RAAAAKLGTFDLSGYEIYTSCEPCPMCLGAIYWARLDKMYYGNNKTDAKNIGFDDSFIYD 119

Query: 120 A 120
            
Sbjct: 120 E 120


>gi|91201072|emb|CAJ74130.1| similar to guanine deaminase [Candidatus Kuenenia stuttgartiensis]
          Length = 182

 Score =  145 bits (367), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 46/153 (30%), Positives = 72/153 (47%), Gaps = 10/153 (6%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
             +M  A+ +A+   L  + P GA  + NN++IS   N   +  D+TAHAEI+AIR  C+
Sbjct: 30  EKWMRLAINKAKEGILDGQTPFGACIIKNNRLISCVHNHVWKNTDITAHAEIIAIREACK 89

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIE----NGTQFYTLA 120
           IL+   L    +Y T EPC MC +A   ARI ++ YGAS      I     + +      
Sbjct: 90  ILNTVDLSGCTIYSTCEPCPMCFSACHWARIAKIVYGASIKDALAIGFNELSISNEAMKK 149

Query: 121 TCHHSPEIYPGISEQRSRQI----IQDFFKERR 149
                 EI   +  + +  +    ++   + RR
Sbjct: 150 NGGSPVEIKGNVLPKENIALFALWLKQ--QNRR 180


>gi|312129827|ref|YP_003997167.1| cmp/dcmp deaminase zinc-binding protein [Leadbetterella byssophila
           DSM 17132]
 gi|311906373|gb|ADQ16814.1| CMP/dCMP deaminase zinc-binding protein [Leadbetterella byssophila
           DSM 17132]
          Length = 168

 Score =  145 bits (367), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 38/115 (33%), Positives = 57/115 (49%), Gaps = 1/115 (0%)

Query: 7   FMSCALEEAQNAALRN-EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           FM  A+E ++ A      +P+G V V N +II    N   E  + T+H E++AI   CR 
Sbjct: 13  FMLKAIELSEIAYKSGKGLPIGCVIVRNGEIIGEGHNEIFERVNPTSHGEMVAIERACRN 72

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
           ++   L E  +Y TLEPC MC  AI  A+I ++Y+  +N     +     F    
Sbjct: 73  INSLQLSECQMYTTLEPCPMCLGAIYWAKINKVYFANTNADASKVGFDDTFIFDE 127


>gi|220904518|ref|YP_002479830.1| CMP/dCMP deaminase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
 gi|219868817|gb|ACL49152.1| CMP/dCMP deaminase zinc-binding [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
          Length = 155

 Score =  145 bits (366), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 37/94 (39%), Positives = 50/94 (53%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  A+E ++ +      P GAV V + KII    N      D TAHAE+ AIR  CR L
Sbjct: 6   FMERAIELSKQSMAAGGGPFGAVIVRDGKIIGEGTNNVTPHNDPTAHAEVEAIRNACRAL 65

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
               L    ++ + EPC MC +AI  ARI ++Y+
Sbjct: 66  ETFDLSGSAIFTSCEPCPMCLSAIWWARIGKIYF 99


>gi|189462876|ref|ZP_03011661.1| hypothetical protein BACCOP_03576 [Bacteroides coprocola DSM 17136]
 gi|189430492|gb|EDU99476.1| hypothetical protein BACCOP_03576 [Bacteroides coprocola DSM 17136]
          Length = 161

 Score =  145 bits (366), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 45/150 (30%), Positives = 64/150 (42%), Gaps = 10/150 (6%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M K  + M  A+E +         P GAV   N +II+   NR     D TAHAE+ AIR
Sbjct: 7   MTKEEL-MRKAIELSVQNVAEGGGPFGAVIAKNGEIIAMGVNRVTPDCDPTAHAEVSAIR 65

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF---- 116
              +IL    L   ++Y + EPC MC  AI  A + R+YYG S      I     F    
Sbjct: 66  TAAKILGTFDLSGCEIYTSCEPCPMCLGAIYWAHLDRMYYGNSKNDAADIGFDDAFIYEE 125

Query: 117 YTLATCHHSP--EIYPGISEQRSRQIIQDF 144
             L         E+   +  + + +  +D+
Sbjct: 126 LDLKPADRKLKSEV---LLPEEAIKAFRDW 152


>gi|291005515|ref|ZP_06563488.1| guanine deaminase [Saccharopolyspora erythraea NRRL 2338]
          Length = 160

 Score =  145 bits (366), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 33/94 (35%), Positives = 49/94 (52%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M+ A+E A  +      P GAV V + +I++   N+     D TAHAE++AIR  C+ L
Sbjct: 11  WMARAIELATRSVADGGGPFGAVVVKDGEIVATGHNQVTTNLDPTAHAEVVAIRNACQAL 70

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
               L    L  + EPC MC A+   AR+  + Y
Sbjct: 71  GTFKLDGCVLVTSCEPCPMCMASALWARMESVVY 104


>gi|312378080|gb|EFR24748.1| hypothetical protein AND_10447 [Anopheles darlingi]
          Length = 186

 Score =  145 bits (366), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 45/154 (29%), Positives = 71/154 (46%), Gaps = 15/154 (9%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVL-----NNKIISRAGNRNRELKDVTAHAEILAI 59
           + FM  AL++A+ A    E+PVG V V      +  II+R  N   E K+ T H E + I
Sbjct: 2   DCFMEDALQQARLANDLKEVPVGCVFVYGPNEGDGVIIARGCNLVNETKNATRHVEFICI 61

Query: 60  RMG---CRILS----QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN 112
                  R       + I   + + VT+EPC MCAAA+    +R + YG  N + GG   
Sbjct: 62  DQALEYARAHGFEPPESIFTSISVVVTVEPCIMCAAALLNLGVREIVYGCRNDRFGG-ST 120

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
                 L   +    I  G+    + +++++F+K
Sbjct: 121 VLDVARLLKSN--IPIRGGVRGDEAMELLKEFYK 152


>gi|167540179|ref|XP_001741595.1| tRNA-specific adenosine deaminase [Entamoeba dispar SAW760]
 gi|165893805|gb|EDR21932.1| tRNA-specific adenosine deaminase, putative [Entamoeba dispar
           SAW760]
          Length = 166

 Score =  145 bits (366), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 44/129 (34%), Positives = 63/129 (48%), Gaps = 3/129 (2%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAI 59
           M+    +M+ AL+  Q A    E+PVG V +    +I+++  N  +E +D T HAEI+ I
Sbjct: 1   MQDDKYYMNEALKMGQEALNIGEVPVGCVVINSKGEIVAKGRNHTKEFQDGTQHAEIVCI 60

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
                      L E  LYVT EPC MCA A+    I ++ YG SN + GG  +       
Sbjct: 61  NQLVEKHI--RLNECILYVTCEPCIMCAEALKQCGITKIIYGCSNARFGGCGSVMTVIKS 118

Query: 120 ATCHHSPEI 128
           +    S EI
Sbjct: 119 SPYKSSHEI 127


>gi|307354384|ref|YP_003895435.1| CMP/dCMP deaminase zinc-binding protein [Methanoplanus petrolearius
           DSM 11571]
 gi|307157617|gb|ADN36997.1| CMP/dCMP deaminase zinc-binding protein [Methanoplanus petrolearius
           DSM 11571]
          Length = 148

 Score =  145 bits (366), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 44/143 (30%), Positives = 61/143 (42%), Gaps = 12/143 (8%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           + FM+ A+ EA+       IP+GAV V + KII    NR  +  D   HAEI  +R   R
Sbjct: 6   DRFMTAAIIEAKTGHDEGGIPIGAVLVRDGKIIGSGHNRRIQENDPIIHAEIDCLRNAGR 65

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
           I S     +  LY TL PC +CA A+    IRR+  G S    G  E             
Sbjct: 66  IGS---YKDTTLYSTLMPCYLCAGAVVQFGIRRVVVGESRNFAGAKEFLISM-------- 114

Query: 125 SPEIYPGISEQRSRQIIQDFFKE 147
             E+   +       ++ +F K 
Sbjct: 115 GVEVTD-LDLDECADMMAEFIKN 136


>gi|145511355|ref|XP_001441605.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124408855|emb|CAK74208.1| unnamed protein product [Paramecium tetraurelia]
          Length = 158

 Score =  145 bits (366), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 46/144 (31%), Positives = 69/144 (47%), Gaps = 14/144 (9%)

Query: 6   VFMSCALEEAQNAALRNEIPVGAVAVL--NNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
            +M  ALE+A+      E+PVG V V   + KI+ +A N   + K+ T H EI+ I    
Sbjct: 10  KYMKMALEQAELGRQNKEVPVGCVIVNRNDGKIVEKAYNNTNKSKNATQHCEIICINRMN 69

Query: 64  RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123
           R      L +  L+VT EPC MC  A++  +I  +YYG +N + GG           +  
Sbjct: 70  R-----DLEDCILFVTCEPCIMCGQALNYVKIHSVYYGCNNSRFGGNGTVLSLNKYPSF- 123

Query: 124 HSPEIYPGISEQRSRQIIQDFFKE 147
                  G  E    +I+QDF++E
Sbjct: 124 ------GGHLEYDCMKILQDFYEE 141


>gi|325270746|ref|ZP_08137337.1| guanine deaminase [Prevotella multiformis DSM 16608]
 gi|324986862|gb|EGC18854.1| guanine deaminase [Prevotella multiformis DSM 16608]
          Length = 155

 Score =  145 bits (366), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 40/150 (26%), Positives = 61/150 (40%), Gaps = 10/150 (6%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M K  + M  A++ + ++      P GAV   N +II+   N      D TAHAE+  IR
Sbjct: 1   MTKEEL-MRRAVKLSADSVRNGGGPFGAVIARNGEIIAEGSNGVTIYNDPTAHAEVSVIR 59

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF---- 116
             C  L    L   ++Y + EPC MC  AI  A + ++YY         I     F    
Sbjct: 60  KACHQLHTFDLTGCEIYTSCEPCPMCLGAIYWAHLDKIYYANDRKDAAAIGFDDDFIYQE 119

Query: 117 YTLATCHHSP--EIYPGISEQRSRQIIQDF 144
             L   H     EI   +    + ++ + +
Sbjct: 120 IELEPLHRKKPSEI---LLRSEAIKVFEQW 146


>gi|79328917|ref|NP_001031959.1| cytidine/deoxycytidylate deaminase family protein [Arabidopsis
           thaliana]
 gi|332006386|gb|AED93769.1| cytidine/deoxycytidylate deaminase-like protein [Arabidopsis
           thaliana]
          Length = 204

 Score =  144 bits (365), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 44/120 (36%), Positives = 64/120 (53%), Gaps = 2/120 (1%)

Query: 2   KKGNVFMSCALEEAQNAALRNEI-PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
              + F++ A+EEA       +  P GAV V NN++++   N   +  D TAHAE+ AIR
Sbjct: 47  DSDHKFLTQAVEEAYKGVDCGDGGPFGAVIVHNNEVVASCHNMVLKYTDPTAHAEVTAIR 106

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
             C+ L++  L E ++Y + EPC MC  AI L+R++RL YGA       I     F   A
Sbjct: 107 EACKKLNKIELSECEIYASCEPCPMCFGAIHLSRLKRLVYGAKAEAAIAIGF-DDFIADA 165


>gi|77462818|ref|YP_352322.1| hypothetical protein RSP_2267 [Rhodobacter sphaeroides 2.4.1]
 gi|77387236|gb|ABA78421.1| cytidine and deoxycytidylate deaminase family protein [Rhodobacter
           sphaeroides 2.4.1]
          Length = 150

 Score =  144 bits (365), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 65/115 (56%), Positives = 80/115 (69%), Gaps = 1/115 (0%)

Query: 35  KIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLAR 94
           ++++RAGNR REL D TAHAE+LAIR  C  L  E L   DLYVTLEPC MCAAAIS AR
Sbjct: 35  QVVARAGNRCRELSDPTAHAEMLAIRAACATLG-ERLTGCDLYVTLEPCPMCAAAISAAR 93

Query: 95  IRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
           I RLYYGA++PK GG+  G + +    CHH PE+Y GI E  +  +++ FF  RR
Sbjct: 94  IARLYYGAADPKSGGVAQGARVFAHPQCHHVPEVYDGIGEAEAAALLRGFFSARR 148


>gi|221638686|ref|YP_002524948.1| CMP/dCMP deaminase, zinc-binding [Rhodobacter sphaeroides KD131]
 gi|221159467|gb|ACM00447.1| CMP/dCMP deaminase, zinc-binding [Rhodobacter sphaeroides KD131]
          Length = 144

 Score =  144 bits (365), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 65/115 (56%), Positives = 80/115 (69%), Gaps = 1/115 (0%)

Query: 35  KIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLAR 94
           ++++RAGNR REL D TAHAE+LAIR  C  L  E L   DLYVTLEPC MCAAAIS AR
Sbjct: 29  QVVARAGNRCRELSDPTAHAEMLAIRAACATLG-ERLTGCDLYVTLEPCPMCAAAISAAR 87

Query: 95  IRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
           I RLYYGA++PK GG+  G + +    CHH PE+Y GI E  +  +++ FF  RR
Sbjct: 88  IARLYYGAADPKSGGVAQGARVFAHPQCHHVPEVYDGIGEAEAAALLRGFFAARR 142


>gi|319901465|ref|YP_004161193.1| CMP/dCMP deaminase zinc-binding protein [Bacteroides helcogenes P
           36-108]
 gi|319416496|gb|ADV43607.1| CMP/dCMP deaminase zinc-binding protein [Bacteroides helcogenes P
           36-108]
          Length = 156

 Score =  144 bits (365), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 41/116 (35%), Positives = 56/116 (48%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M     FM  A++ A +   R   P GAV V + KI+ +  N      D TAHAE++AIR
Sbjct: 1   MAYQKEFMETAIQLALDNINRGGGPFGAVIVKDGKIVGQGCNSVTNHLDPTAHAEVMAIR 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116
             C+ L   IL   ++Y + EPC MC +AI  A I R+YY  +            F
Sbjct: 61  NTCQALDTFILEGCEIYSSCEPCPMCLSAIYWAHIDRIYYACTKCDAAQAGFDDSF 116


>gi|83955334|ref|ZP_00963989.1| cytidine and deoxycytidylate deaminase family protein
           [Sulfitobacter sp. NAS-14.1]
 gi|83840327|gb|EAP79501.1| cytidine and deoxycytidylate deaminase family protein
           [Sulfitobacter sp. NAS-14.1]
          Length = 151

 Score =  144 bits (365), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 69/129 (53%), Positives = 91/129 (70%), Gaps = 1/129 (0%)

Query: 22  NEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80
            E+PVGAV V  + +++++AGNR REL D TAHAE+LAIR  C     E L    LYVTL
Sbjct: 21  GEVPVGAVIVAPDGQVVAQAGNRTRELNDPTAHAEVLAIRAACAAAGSERLGGHALYVTL 80

Query: 81  EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140
           EPC MCAAAIS AR+ RLYYGAS+PK GG+  G + ++ A CHH+P++Y  I+   S Q+
Sbjct: 81  EPCAMCAAAISAARVARLYYGASDPKSGGVAQGARVFSHAQCHHAPDVYDAIAAPESEQL 140

Query: 141 IQDFFKERR 149
           ++ FF E+R
Sbjct: 141 LRAFFAEKR 149


>gi|332308193|ref|YP_004436044.1| CMP/dCMP deaminase zinc-binding protein [Glaciecola agarilytica
           4H-3-7+YE-5]
 gi|332175522|gb|AEE24776.1| CMP/dCMP deaminase zinc-binding protein [Glaciecola agarilytica
           4H-3-7+YE-5]
          Length = 145

 Score =  144 bits (365), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 37/144 (25%), Positives = 62/144 (43%), Gaps = 10/144 (6%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           + FM  A++EA+       IP+G+V V  ++II R  NR  +      H E+ A+    R
Sbjct: 2   DKFMQAAIDEAKQGLAEGGIPIGSVLVYQDEIIGRGHNRRVQSGSPILHGEMDALENAGR 61

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
             +  +     LY TL PC+MC+  I L  I ++  G  N    G E+          + 
Sbjct: 62  QPAS-VYKASTLYTTLSPCSMCSGTILLYGIPKVVIG-ENKTFQGEES---LLKSRGVN- 115

Query: 125 SPEIYPGISEQRSRQIIQDFFKER 148
                  +  Q    ++ DF +++
Sbjct: 116 ----IDLVHSQECIDLMNDFIRDK 135


>gi|109900168|ref|YP_663423.1| cytosine deaminase [Pseudoalteromonas atlantica T6c]
 gi|109702449|gb|ABG42369.1| Cytosine deaminase [Pseudoalteromonas atlantica T6c]
          Length = 145

 Score =  144 bits (365), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 41/144 (28%), Positives = 66/144 (45%), Gaps = 10/144 (6%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           + FM  A++EA+       IP+G+V V NNKII R  N+  +      H E+ A+    R
Sbjct: 2   DKFMQAAIDEAKLGLAEGGIPIGSVLVHNNKIIGRGHNKRVQSGSPILHGEMDALENAGR 61

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
             ++ +  E  LY TL PC+MC+  I L  I ++  G  N    G E+     T    + 
Sbjct: 62  QPAR-VYKESTLYTTLSPCSMCSGTILLYGIPKVVIG-ENQTFMGEES---LLTSRGVNT 116

Query: 125 SPEIYPGISEQRSRQIIQDFFKER 148
                  +  Q    ++ DF +++
Sbjct: 117 QV-----LHNQECISLMNDFIRDK 135


>gi|297582994|ref|YP_003698774.1| CMP/dCMP deaminase zinc-binding protein [Bacillus selenitireducens
           MLS10]
 gi|297141451|gb|ADH98208.1| CMP/dCMP deaminase zinc-binding protein [Bacillus selenitireducens
           MLS10]
          Length = 147

 Score =  144 bits (364), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 39/148 (26%), Positives = 66/148 (44%), Gaps = 10/148 (6%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
                +M  A+E A+ + +    P GA+ V + +++  A N+     D T H EI+ +R 
Sbjct: 3   NTHEYWMRQAIELARASKIAGNDPFGALLVKDGEVVMTATNQIHTATDPTHHPEIVLVRD 62

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI-------ENGT 114
            CR      L +V LY + EPC MC+ A+  + + RL Y  S+ +  GI        +G 
Sbjct: 63  YCRQEGITDLKDVTLYTSCEPCVMCSGAMVWSNLGRLVYSVSHEQLLGITASNIQLSSGD 122

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQ 142
            F         PE+ P +  +   ++  
Sbjct: 123 VFLNSP---WKPEVIPLVCNEEGLRLFS 147


>gi|108801923|ref|YP_642120.1| tRNA-adenosine deaminase [Mycobacterium sp. MCS]
 gi|119871075|ref|YP_941027.1| tRNA-adenosine deaminase [Mycobacterium sp. KMS]
 gi|126437904|ref|YP_001073595.1| tRNA-adenosine deaminase [Mycobacterium sp. JLS]
 gi|108772342|gb|ABG11064.1| tRNA-adenosine deaminase [Mycobacterium sp. MCS]
 gi|119697164|gb|ABL94237.1| tRNA-adenosine deaminase [Mycobacterium sp. KMS]
 gi|126237704|gb|ABO01105.1| tRNA-adenosine deaminase [Mycobacterium sp. JLS]
          Length = 150

 Score =  144 bits (364), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 45/129 (34%), Positives = 68/129 (52%), Gaps = 2/129 (1%)

Query: 23  EIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQ-EILPEVDLYVTL 80
           ++P+GAV    +   ++RA N    L D TAHAE+LA+R    +L     L    L VT+
Sbjct: 22  DVPIGAVVFGPDGTELARAANAREALGDPTAHAEVLALRAAAAVLGDGWRLEGTTLAVTV 81

Query: 81  EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140
           EPCTMCA A+ LAR+ R+ +GA  PK G + +          +H P +  G+      + 
Sbjct: 82  EPCTMCAGALVLARVARVVFGAWEPKTGAVGSLWDVVRDRRLNHRPGVRGGVLADECAKP 141

Query: 141 IQDFFKERR 149
           ++ FF  +R
Sbjct: 142 LEAFFARQR 150


>gi|217071124|gb|ACJ83922.1| unknown [Medicago truncatula]
          Length = 186

 Score =  144 bits (364), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 42/112 (37%), Positives = 60/112 (53%), Gaps = 1/112 (0%)

Query: 2   KKGNVFMSCALEEAQNAALRNEI-PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
            + + F+  A+EEA       +  P GAV V N+++++   N      D TAHAE+ AIR
Sbjct: 29  DRDHKFLRRAVEEAYKGVDCGDGGPFGAVIVHNDEVVASCHNMVLNFTDPTAHAEVTAIR 88

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN 112
             C+ L Q  L + ++Y + EPC MC  AI L+RI+RL YGA       I  
Sbjct: 89  EACKKLKQIELSDCEIYASCEPCPMCFGAIHLSRIKRLVYGAKAEAAIAIGF 140


>gi|195143831|ref|XP_002012900.1| GL23678 [Drosophila persimilis]
 gi|194101843|gb|EDW23886.1| GL23678 [Drosophila persimilis]
          Length = 160

 Score =  144 bits (364), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 43/147 (29%), Positives = 72/147 (48%), Gaps = 9/147 (6%)

Query: 6   VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
            FM  AL EA+ A    E+PVG V V  +K+++R  N     ++ T HAE + I      
Sbjct: 3   AFMEEALMEARRARDAGEVPVGCVFVHEDKVVARGANEVNVSRNATRHAEFICIDAILAY 62

Query: 66  LSQEILP------EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
             ++ LP      E+ + VT+EPC MC+AA+    ++ + +G  N + GG    T     
Sbjct: 63  CREKNLPARQMFSEIIVVVTVEPCIMCSAALHTLGVQEIIFGCENDRFGG---KTVVNVG 119

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFK 146
           A      +I  G+    +  ++++F+K
Sbjct: 120 AVVGKKIKITGGVRGDEAMALLKEFYK 146


>gi|126461710|ref|YP_001042824.1| CMP/dCMP deaminase, zinc-binding [Rhodobacter sphaeroides ATCC
           17029]
 gi|126103374|gb|ABN76052.1| CMP/dCMP deaminase, zinc-binding [Rhodobacter sphaeroides ATCC
           17029]
          Length = 150

 Score =  144 bits (364), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 65/115 (56%), Positives = 80/115 (69%), Gaps = 1/115 (0%)

Query: 35  KIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLAR 94
           ++++RAGNR REL D TAHAE+LAIR  C  L  E L   DLYVTLEPC MCAAAIS AR
Sbjct: 35  QVVARAGNRCRELSDPTAHAEMLAIRAACATLG-ERLTGCDLYVTLEPCPMCAAAISAAR 93

Query: 95  IRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
           I RLYYGA++PK GG+  G + +    CHH PE+Y GI E  +  +++ FF  RR
Sbjct: 94  IARLYYGAADPKSGGVAQGARVFAHPQCHHVPEVYDGIGEAEAAALLRGFFAARR 148


>gi|282891755|ref|ZP_06300236.1| hypothetical protein pah_c197o065 [Parachlamydia acanthamoebae str.
           Hall's coccus]
 gi|281498339|gb|EFB40677.1| hypothetical protein pah_c197o065 [Parachlamydia acanthamoebae str.
           Hall's coccus]
          Length = 161

 Score =  144 bits (364), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 37/105 (35%), Positives = 52/105 (49%), Gaps = 4/105 (3%)

Query: 2   KKGNVFMSCALEEAQNA---ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           K    FM  A+  ++ A        +  GAV V + KII+   N+  +  D T HAE+ A
Sbjct: 4   KNHEEFMKRAIALSRKASIEEKTGGV-FGAVIVKDGKIIAEGYNQVLKHNDPTWHAEMHA 62

Query: 59  IRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
           IR  C+ L +  L   DLY + E C MC +A   A I  +YY A+
Sbjct: 63  IREACKKLGKPHLEGCDLYTSAECCPMCLSAAYWAHIDHIYYAAT 107


>gi|12060484|dbj|BAB20627.1| hypothetical protein [Thermosynechococcus elongatus]
          Length = 105

 Score =  144 bits (364), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 42/93 (45%), Positives = 55/93 (59%), Gaps = 1/93 (1%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
            + +M  A+  A+ A   +E+PVGAV V   N++I+   NR +   D TAHAEI+A+R  
Sbjct: 13  HDFWMQQAIALAEQAGAADEVPVGAVIVSAENELIATGENRRQRDHDPTAHAEIIALRRA 72

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARI 95
            + L    L    LYVTLEPC MCA AI  ARI
Sbjct: 73  GQRLGTWYLTGCRLYVTLEPCPMCAGAIVQARI 105


>gi|67481305|ref|XP_656002.1| cytidine/deoxycytidylate deaminase family protein [Entamoeba
           histolytica HM-1:IMSS]
 gi|56473174|gb|EAL50617.1| cytidine/deoxycytidylate deaminase family protein [Entamoeba
           histolytica HM-1:IMSS]
          Length = 166

 Score =  144 bits (364), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 43/129 (33%), Positives = 63/129 (48%), Gaps = 5/129 (3%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAI 59
           M+    +M+ AL+  Q A    E+PVG V +    +I+++  N  +E +D T HAEI+ I
Sbjct: 1   MQDDKYYMNEALKMGQEALNIGEVPVGCVVINSKGEIVAKGRNHTKEFQDGTQHAEIVCI 60

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFY-- 117
                      L E  LYVT EPC MCA A+    I ++ YG SN + GG  +       
Sbjct: 61  NQLVEKHV--HLSECILYVTCEPCIMCAEALKQCGITKIIYGCSNARFGGCGSVMTVIKS 118

Query: 118 TLATCHHSP 126
           +L   +H  
Sbjct: 119 SLYKSNHEI 127


>gi|157135264|ref|XP_001656575.1| tRNA-specific adenosine-34 deaminase subunit Tad2p/ADAT2, putative
           [Aedes aegypti]
 gi|108870242|gb|EAT34467.1| tRNA-specific adenosine-34 deaminase subunit Tad2p/ADAT2, putative
           [Aedes aegypti]
          Length = 171

 Score =  144 bits (364), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 46/148 (31%), Positives = 69/148 (46%), Gaps = 9/148 (6%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           + FM  ALE+A+ A    E+PVG V V   +II+   N   E K+ T H E + I     
Sbjct: 12  DHFMEQALEQARKAEQLKEVPVGCVFVYRGEIIANGCNLVNETKNATRHVEFICIDQVLE 71

Query: 65  ILSQEILPEVDLY------VTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
                 L   D++      VT+EPC MCAAA+    +R + YG  N + GG    T    
Sbjct: 72  YCKNRSLKHEDVFREVTVVVTVEPCIMCAAALIELNVREVIYGCKNDRFGGC---TVLDV 128

Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFK 146
                 S  I  G+    + +++++F+K
Sbjct: 129 PGLLKTSIPIRGGVRADEAMELLKEFYK 156


>gi|332557706|ref|ZP_08412028.1| hypothetical protein RSWS8N_01605 [Rhodobacter sphaeroides WS8N]
 gi|332275418|gb|EGJ20733.1| hypothetical protein RSWS8N_01605 [Rhodobacter sphaeroides WS8N]
          Length = 150

 Score =  144 bits (364), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 66/115 (57%), Positives = 80/115 (69%), Gaps = 1/115 (0%)

Query: 35  KIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLAR 94
           ++++RAGNR REL D TAHAE+LAIR  C  L  E L   DLYVTLEPC MCAAAIS AR
Sbjct: 35  QVVARAGNRCRELSDPTAHAEMLAIRAACATLG-ERLTGCDLYVTLEPCPMCAAAISAAR 93

Query: 95  IRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
           I RLYYGA++PK GG+  G + +    CHH PEIY GI E  +  +++ FF  RR
Sbjct: 94  IARLYYGAADPKSGGVAQGARVFAHPQCHHVPEIYDGIGEAEAAALLRGFFSARR 148


>gi|29345731|ref|NP_809234.1| cytidine/deoxycytidylate deaminase [Bacteroides thetaiotaomicron
           VPI-5482]
 gi|253567719|ref|ZP_04845130.1| cytidine/deoxycytidylate deaminase [Bacteroides sp. 1_1_6]
 gi|298384629|ref|ZP_06994189.1| guanine deaminase [Bacteroides sp. 1_1_14]
 gi|29337624|gb|AAO75428.1| cytidine/deoxycytidylate deaminase [Bacteroides thetaiotaomicron
           VPI-5482]
 gi|251841792|gb|EES69872.1| cytidine/deoxycytidylate deaminase [Bacteroides sp. 1_1_6]
 gi|298262908|gb|EFI05772.1| guanine deaminase [Bacteroides sp. 1_1_14]
          Length = 156

 Score =  143 bits (363), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 39/121 (32%), Positives = 53/121 (43%), Gaps = 2/121 (1%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVA-VLNNKIISRAGNRNRELKDVTAHAEILAI 59
           M K  + M  A+E ++        P GAV      +II+   NR     D TAHAE+ AI
Sbjct: 1   MTKEEL-MRKAIELSKENVANGGGPFGAVIATKEGEIIATGVNRVTSSCDPTAHAEVSAI 59

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
           R     L    L   ++Y + EPC MC  AI  AR+ ++YYG +      I     F   
Sbjct: 60  RAAAAKLGTFNLSGYEIYTSCEPCPMCLGAIYWARLDKMYYGNNKTDAKNIGFDDSFIYD 119

Query: 120 A 120
            
Sbjct: 120 E 120


>gi|323454898|gb|EGB10767.1| hypothetical protein AURANDRAFT_22290 [Aureococcus anophagefferens]
          Length = 172

 Score =  143 bits (363), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 47/146 (32%), Positives = 70/146 (47%), Gaps = 11/146 (7%)

Query: 8   MSCALEEAQNA-ALRNEIPVGAVAVLNNKI-ISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M  ALE A++A A + E+PVG V V +N + I+ A N   E    T HAE++AI    + 
Sbjct: 1   MRRALELAEDAVAEQGEVPVGCVFVNDNNVEIASAANETNEAMCATRHAELVAIDGALKH 60

Query: 66  LSQE----ILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
            +            LYVT EPC MCA+A+S   I + Y+G  N K GG  +    +    
Sbjct: 61  SAARGQPLDWTRCALYVTCEPCIMCASALSQLGIAKCYFGCRNDKFGGCGSILSLHEGN- 119

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKE 147
                +I  G+ E  +  + + F+  
Sbjct: 120 ----FDIVEGLREAEAVDLFRRFYDR 141


>gi|198451012|ref|XP_001358211.2| GA18791 [Drosophila pseudoobscura pseudoobscura]
 gi|198131295|gb|EAL27348.2| GA18791 [Drosophila pseudoobscura pseudoobscura]
          Length = 160

 Score =  143 bits (363), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 43/147 (29%), Positives = 72/147 (48%), Gaps = 9/147 (6%)

Query: 6   VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
            FM  AL EA+ A    E+PVG V V  +K+++R  N     ++ T HAE + I      
Sbjct: 3   AFMEEALMEARRARDAGEVPVGCVFVHEDKVVARGANEVNVSRNATRHAEFICIDAILAY 62

Query: 66  LSQEILP------EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
             ++ LP      E+ + VT+EPC MC+AA+    ++ + +G  N + GG    T     
Sbjct: 63  CREKNLPARQMFSEIIVVVTVEPCIMCSAALHTLGVQEIIFGCENDRFGG---KTVVNVG 119

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFK 146
           A      +I  G+    +  ++++F+K
Sbjct: 120 AVVGKKIKITGGVRGDEAMALLKEFYK 146


>gi|255718193|ref|XP_002555377.1| KLTH0G07832p [Lachancea thermotolerans]
 gi|238936761|emb|CAR24940.1| KLTH0G07832p [Lachancea thermotolerans]
          Length = 250

 Score =  143 bits (363), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 38/155 (24%), Positives = 67/155 (43%), Gaps = 11/155 (7%)

Query: 1   MKKGNV--FMSCALEEAQNAALRNEIPVGAVAVLN--NKIISRAGNRNRELKDVTAHAEI 56
           M   +   FM  A + A+ A    E PV  + V    +++++   N         AHAE 
Sbjct: 1   MSLDSYVHFMRMATKLARYALDHGETPVACIFVHTPADQVVAYGMNDTNRSLTGIAHAEF 60

Query: 57  LAIRMGCRILS---QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENG 113
           + I             I  ++ LYVT+EPC MCA+A+    I+++ +G  N + GG  + 
Sbjct: 61  MGIEQIQSKFGAQDTSIFKDITLYVTVEPCIMCASALKQLGIQKVVFGCGNERFGGNGSI 120

Query: 114 TQFYTL---ATCHHSPEIYPGISEQRSRQIIQDFF 145
                    A  +    + PGI  + +  +++ F+
Sbjct: 121 LSIQKDSCTAPQNKHISV-PGILRKEAIMLLRYFY 154


>gi|16078382|ref|NP_389200.1| guanine deaminase [Bacillus subtilis subsp. subtilis str. 168]
 gi|221309178|ref|ZP_03591025.1| guanine deaminase [Bacillus subtilis subsp. subtilis str. 168]
 gi|221313504|ref|ZP_03595309.1| guanine deaminase [Bacillus subtilis subsp. subtilis str. NCIB
           3610]
 gi|221318426|ref|ZP_03599720.1| guanine deaminase [Bacillus subtilis subsp. subtilis str. JH642]
 gi|221322700|ref|ZP_03603994.1| guanine deaminase [Bacillus subtilis subsp. subtilis str. SMY]
 gi|321315069|ref|YP_004207356.1| guanine deaminase [Bacillus subtilis BSn5]
 gi|23396605|sp|O34598|GUAD_BACSU RecName: Full=Guanine deaminase; Short=GDEase; Short=Guanase;
           Short=Guanine aminase; AltName: Full=Guanine
           aminohydrolase; Short=GAH
 gi|2632037|emb|CAA05596.1| YkoA [Bacillus subtilis]
 gi|2633671|emb|CAB13174.1| guanine deaminase [Bacillus subtilis subsp. subtilis str. 168]
 gi|291483843|dbj|BAI84918.1| guanine deaminase [Bacillus subtilis subsp. natto BEST195]
 gi|320021343|gb|ADV96329.1| guanine deaminase [Bacillus subtilis BSn5]
          Length = 156

 Score =  143 bits (363), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 37/115 (32%), Positives = 50/115 (43%), Gaps = 1/115 (0%)

Query: 3   KGNVFMSCALEEAQNAALRN-EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
               F+  A+  A          P GAV V +  II+   N      D TAHAE+ AIR 
Sbjct: 2   NHETFLKRAVTLACEGVNAGIGGPFGAVIVKDGAIIAEGQNNVTTSNDPTAHAEVTAIRK 61

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116
            C++L    L +  LY + EPC MC  AI  AR + ++Y A +           F
Sbjct: 62  ACKVLGAYQLDDCILYTSCEPCPMCLGAIYWARPKAVFYAAEHTDAAEAGFDDSF 116


>gi|83944514|ref|ZP_00956966.1| cytidine and deoxycytidylate deaminase family protein
           [Sulfitobacter sp. EE-36]
 gi|83844620|gb|EAP82505.1| cytidine and deoxycytidylate deaminase family protein
           [Sulfitobacter sp. EE-36]
          Length = 151

 Score =  143 bits (363), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 67/129 (51%), Positives = 89/129 (68%), Gaps = 1/129 (0%)

Query: 22  NEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80
            E+PVGAV V  + +++++AGNR REL D TAHAE+LAIR  C     E L    LYVTL
Sbjct: 21  GEVPVGAVIVAPDGQVVAQAGNRTRELNDPTAHAEVLAIRAACAAAGSERLGGHALYVTL 80

Query: 81  EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140
           EPC MCAAAIS AR+ RLYYGAS+PK GG+  G + ++   CHH+P++Y  I+   S  +
Sbjct: 81  EPCAMCAAAISAARVARLYYGASDPKSGGVAQGARVFSHEQCHHAPDVYDAIAAPESEDL 140

Query: 141 IQDFFKERR 149
           ++ FF E+R
Sbjct: 141 LKAFFAEKR 149


>gi|255008429|ref|ZP_05280555.1| putative nucleotide deaminase [Bacteroides fragilis 3_1_12]
          Length = 149

 Score =  143 bits (363), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 36/113 (31%), Positives = 50/113 (44%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  A+E ++        P GAV   + +I+    NR     D TAHAE+ AIR     L 
Sbjct: 1   MRKAIELSRENVANGGGPFGAVIAKDGEIVVTGVNRVTASCDPTAHAEVTAIRAAASKLG 60

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              L   ++Y + EPC MC  AI  AR+ ++YYG +      I     F    
Sbjct: 61  TFNLSGYEIYTSCEPCPMCLGAIYWARLDKMYYGNNKTDAKNIGFDDSFIYDE 113


>gi|260574584|ref|ZP_05842587.1| CMP/dCMP deaminase zinc-binding [Rhodobacter sp. SW2]
 gi|259023001|gb|EEW26294.1| CMP/dCMP deaminase zinc-binding [Rhodobacter sp. SW2]
          Length = 161

 Score =  143 bits (363), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 66/110 (60%), Positives = 80/110 (72%)

Query: 40  AGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLY 99
           AGNR REL D TAHAE+LAIR  C     E L   DLYVTLEPC MCAAAISLARI RLY
Sbjct: 51  AGNRVRELCDPTAHAEVLAIRAACAAAGSERLVGHDLYVTLEPCPMCAAAISLARIGRLY 110

Query: 100 YGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
           YGA++PK GG+  GT+ ++   CHH PEIY GI  +++  +++DFF +RR
Sbjct: 111 YGAADPKSGGVAQGTRVFSHPQCHHVPEIYDGIGAEQAADLLRDFFADRR 160


>gi|320108633|ref|YP_004184223.1| Guanine deaminase [Terriglobus saanensis SP1PR4]
 gi|319927154|gb|ADV84229.1| Guanine deaminase [Terriglobus saanensis SP1PR4]
          Length = 161

 Score =  143 bits (363), Expect = 7e-33,   Method: Composition-based stats.
 Identities = 38/117 (32%), Positives = 50/117 (42%), Gaps = 1/117 (0%)

Query: 2   KKGNVFMSCALEEAQNAALRN-EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
            +   FM  A+  A          P G V V + ++I+   N      D TAHAE+ AIR
Sbjct: 6   TQHAQFMQQAIRLATENVTSGRGGPFGCVIVRDGEVIAARANSVTATNDPTAHAEVNAIR 65

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFY 117
             C  L    L   D+Y + EPC MC AAI  AR R +Y+G +            F 
Sbjct: 66  AACAALGTFQLTGCDVYTSCEPCPMCLAAIYWARCRSIYFGNTAQDAAEAGFDDSFL 122


>gi|213025788|ref|ZP_03340235.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp.
          enterica serovar Typhi str. 404ty]
          Length = 98

 Score =  143 bits (363), Expect = 7e-33,   Method: Composition-based stats.
 Identities = 41/92 (44%), Positives = 53/92 (57%)

Query: 3  KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
              +M  AL  A+ A    E+PVGAV V N+++I    NR     D TAHAEI+A+R G
Sbjct: 7  DHEYWMRHALTLAKRAWDEREVPVGAVLVHNHRVIGEGWNRPIGRHDPTAHAEIMALRQG 66

Query: 63 CRILSQEILPEVDLYVTLEPCTMCAAAISLAR 94
            +L    L +  LYVTLEPC MCA A+  +R
Sbjct: 67 GLVLQNYRLLDTTLYVTLEPCVMCAGAMVHSR 98


>gi|330991261|ref|ZP_08315212.1| tRNA-specific adenosine deaminase [Gluconacetobacter sp. SXCC-1]
 gi|329761280|gb|EGG77773.1| tRNA-specific adenosine deaminase [Gluconacetobacter sp. SXCC-1]
          Length = 107

 Score =  143 bits (363), Expect = 7e-33,   Method: Composition-based stats.
 Identities = 44/105 (41%), Positives = 64/105 (60%)

Query: 45  RELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASN 104
               D +AHAE+  +R   R+     L +  LYVTLEPC MCAAA    R+ R+ +GA +
Sbjct: 2   EACHDPSAHAEMQVMRAATRLRGGARLVDCTLYVTLEPCPMCAAAAIHFRMGRIVFGAYD 61

Query: 105 PKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
           PKGGG+E+G + +T   C H PE   G+ E+ +  ++QDFF++ R
Sbjct: 62  PKGGGVEHGPRLFTHPRCLHRPETVGGVREREAGTLLQDFFRQLR 106


>gi|52140651|ref|YP_086177.1| cytidine/deoxycytidylate deaminase family protein; guanine
           deaminase [Bacillus cereus E33L]
 gi|51974120|gb|AAU15670.1| cytidine/deoxycytidylate deaminase family protein; probable guanine
           deaminase [Bacillus cereus E33L]
          Length = 153

 Score =  143 bits (362), Expect = 7e-33,   Method: Composition-based stats.
 Identities = 42/116 (36%), Positives = 61/116 (52%), Gaps = 1/116 (0%)

Query: 3   KGNVFMSCALEEAQNAAL-RNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
               FM  A++ A N        P GAV V + +I+++  N      D TAHAE+L IR 
Sbjct: 2   SHKEFMKLAIDLAYNNTKNEKGKPFGAVLVKDGEIVAKGVNEVLTTHDPTAHAELLTIRE 61

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFY 117
            CRILS   L +  LY + EPC MC +AI  A ++ +YY  ++ +   I  GT++ 
Sbjct: 62  ACRILSTSDLSDCILYASGEPCPMCLSAIYWANLKHVYYSYTSQEEEEIGLGTKYV 117


>gi|298483515|ref|ZP_07001691.1| guanine deaminase [Bacteroides sp. D22]
 gi|298270272|gb|EFI11857.1| guanine deaminase [Bacteroides sp. D22]
          Length = 156

 Score =  143 bits (362), Expect = 7e-33,   Method: Composition-based stats.
 Identities = 38/121 (31%), Positives = 54/121 (44%), Gaps = 2/121 (1%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVA-VLNNKIISRAGNRNRELKDVTAHAEILAI 59
           M K    M  A+E ++   +    P GAV    + +I++   NR     D TAHAE+ AI
Sbjct: 1   MTK-EALMRKAIELSKENVVNGGGPFGAVIATKDGEIVATGVNRVTASCDPTAHAEVSAI 59

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
           R     L    L   ++Y + EPC MC  AI  AR+ ++YYG +      I     F   
Sbjct: 60  RAAAAKLGTFDLSGYEIYTSCEPCPMCLGAIYWARLDKMYYGNNKTDAKNIGFDDSFIYD 119

Query: 120 A 120
            
Sbjct: 120 E 120


>gi|123966234|ref|YP_001011315.1| putative cytidine/deoxycytidylate deaminase [Prochlorococcus
           marinus str. MIT 9515]
 gi|123200600|gb|ABM72208.1| putative cytidine/deoxycytidylate deaminase [Prochlorococcus
           marinus str. MIT 9515]
          Length = 165

 Score =  143 bits (362), Expect = 7e-33,   Method: Composition-based stats.
 Identities = 43/145 (29%), Positives = 66/145 (45%), Gaps = 2/145 (1%)

Query: 6   VFMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
            +M   L  +       E+P+ A  +    + I R  N+     D   HAE++A+R    
Sbjct: 19  KWMRSILRRSDEVGKV-ELPITAFIIDERGRCIGRGSNKRETNNDPLGHAELIALRQASW 77

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
           I +     E  + V LEPCTMCAAA+  AR+  + YGA + K GG           + HH
Sbjct: 78  IKNDWRFNECSIIVNLEPCTMCAAALVQARMGNVIYGAEDHKRGGFGGTIDLSKHESAHH 137

Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149
              +  GI ++     I+ +FK+ R
Sbjct: 138 KMNVIRGILDKDCENRIKIWFKKLR 162


>gi|51248026|pdb|1WKQ|A Chain A, Crystal Structure Of Bacillus Subtilis Guanine Deaminase.
           The First Domain-Swapped Structure In The Cytidine
           Deaminase Superfamily
 gi|51248027|pdb|1WKQ|B Chain B, Crystal Structure Of Bacillus Subtilis Guanine Deaminase.
           The First Domain-Swapped Structure In The Cytidine
           Deaminase Superfamily
          Length = 164

 Score =  143 bits (362), Expect = 8e-33,   Method: Composition-based stats.
 Identities = 37/115 (32%), Positives = 50/115 (43%), Gaps = 1/115 (0%)

Query: 3   KGNVFMSCALEEAQNAALRN-EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
               F+  A+  A          P GAV V +  II+   N      D TAHAE+ AIR 
Sbjct: 10  NHETFLKRAVTLACEGVNAGIGGPFGAVIVKDGAIIAEGQNNVTTSNDPTAHAEVTAIRK 69

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116
            C++L    L +  LY + EPC MC  AI  AR + ++Y A +           F
Sbjct: 70  ACKVLGAYQLDDCILYTSCEPCPMCLGAIYWARPKAVFYAAEHTDAAEAGFDDSF 124


>gi|50513754|pdb|1TIY|A Chain A, X-Ray Structure Of Guanine Deaminase From Bacillus
           Subtilis Northeast Structural Genomics Consortium Target
           Sr160
 gi|50513755|pdb|1TIY|B Chain B, X-Ray Structure Of Guanine Deaminase From Bacillus
           Subtilis Northeast Structural Genomics Consortium Target
           Sr160
          Length = 164

 Score =  143 bits (362), Expect = 8e-33,   Method: Composition-based stats.
 Identities = 36/115 (31%), Positives = 49/115 (42%), Gaps = 1/115 (0%)

Query: 3   KGNVFMSCALEEAQNAALRN-EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
               F+  A+  A          P GAV V +  II+   N      D TAHAE+ AIR 
Sbjct: 2   NHETFLKRAVTLACEGVNAGIGGPFGAVIVKDGAIIAEGQNNVTTSNDPTAHAEVTAIRK 61

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116
            C++L    L +  LY + EPC  C  AI  AR + ++Y A +           F
Sbjct: 62  ACKVLGAYQLDDCILYTSCEPCPXCLGAIYWARPKAVFYAAEHTDAAEAGFDDSF 116


>gi|297833236|ref|XP_002884500.1| deoxycytidine deaminase [Arabidopsis lyrata subsp. lyrata]
 gi|297330340|gb|EFH60759.1| deoxycytidine deaminase [Arabidopsis lyrata subsp. lyrata]
          Length = 191

 Score =  143 bits (361), Expect = 9e-33,   Method: Composition-based stats.
 Identities = 44/118 (37%), Positives = 65/118 (55%), Gaps = 1/118 (0%)

Query: 2   KKGNVFMSCALEEAQNAALRNEI-PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           ++ + +++ A+EEA       +  P GAV V  N+I+    N   + KD TAHAEI+AIR
Sbjct: 38  ERDHKYLTQAVEEAYIGVECGDGRPFGAVIVHKNEIVVSCHNMVLKYKDPTAHAEIIAIR 97

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
             C+ L++  L E +LY + EPC MC  AI L+R++RL YGA       I   +    
Sbjct: 98  EACKKLNEIKLSECELYASCEPCPMCFGAIHLSRLKRLVYGAKAEAAVAIGFNSIIAD 155


>gi|114765383|ref|ZP_01444498.1| cytidine and deoxycytidylate deaminase family protein [Pelagibaca
           bermudensis HTCC2601]
 gi|114542226|gb|EAU45256.1| cytidine and deoxycytidylate deaminase family protein [Roseovarius
           sp. HTCC2601]
          Length = 145

 Score =  143 bits (361), Expect = 9e-33,   Method: Composition-based stats.
 Identities = 69/116 (59%), Positives = 83/116 (71%)

Query: 34  NKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLA 93
             +++ AGNR REL D TAHAEILA+R  CR    E LP  DLYVTLEPC MCAAAIS A
Sbjct: 28  GAVVACAGNRTRELDDPTAHAEILALRAACRAAGSERLPGHDLYVTLEPCPMCAAAISFA 87

Query: 94  RIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
           RI RLYYGA++PK GG+++G + Y  A CHH PE+Y GIS   S  +++ FF ERR
Sbjct: 88  RIARLYYGAADPKSGGVDHGARVYAHAQCHHVPEVYDGISAAPSEALLKRFFAERR 143


>gi|183601156|ref|ZP_02962649.1| hypothetical protein PROSTU_04786 [Providencia stuartii ATCC 25827]
 gi|188019501|gb|EDU57541.1| hypothetical protein PROSTU_04786 [Providencia stuartii ATCC 25827]
          Length = 154

 Score =  143 bits (361), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 39/150 (26%), Positives = 65/150 (43%), Gaps = 5/150 (3%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
           +   F+  A+  A+        P GAV V +  +++   N+  EL D TAHAE++A+R  
Sbjct: 2   QDKQFLQQAISLAKENVKAGGRPFGAVIVRDGAVVATGVNQMLELNDPTAHAELMALRQA 61

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQ-----FY 117
              L +  L +  +Y + +PC MC AA+ +A I R+ Y  SN         T+       
Sbjct: 62  GETLKRTRLEDCVVYASGQPCPMCLAAMRMAGISRIVYAYSNQDAEPFGLSTEAIAQSLR 121

Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
                 H         E  ++  +  F++E
Sbjct: 122 VEPQQQHGLTFIQLKPENEAQSALYTFWRE 151


>gi|312128288|ref|YP_003993162.1| riboflavin biosynthesis protein ribd [Caldicellulosiruptor
           hydrothermalis 108]
 gi|311778307|gb|ADQ07793.1| riboflavin biosynthesis protein RibD [Caldicellulosiruptor
           hydrothermalis 108]
          Length = 371

 Score =  143 bits (361), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 44/152 (28%), Positives = 66/152 (43%), Gaps = 18/152 (11%)

Query: 3   KGNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
             + +M+ ALE A+ A   +     VG V V N  II +  ++    K    HAE+LAI 
Sbjct: 5   SHSYYMNMALELAKKASPLVLPNPRVGCVIVKNGTIIGKGYHQKYGEK----HAEVLAIE 60

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
               I +   L    +YV+LEPC        C  AI  + I+++     +P       G 
Sbjct: 61  DA--IKNGYSLKNATMYVSLEPCCHFGKQPPCTEAIIKSGIKKVVIATRDPNPFVNGKGI 118

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
           Q        H  E+  G+ E+ +  I +DFFK
Sbjct: 119 QILKQ----HGIEVVEGVLEKEAESINKDFFK 146


>gi|224025654|ref|ZP_03644020.1| hypothetical protein BACCOPRO_02394 [Bacteroides coprophilus DSM
           18228]
 gi|224018890|gb|EEF76888.1| hypothetical protein BACCOPRO_02394 [Bacteroides coprophilus DSM
           18228]
          Length = 155

 Score =  143 bits (361), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 42/150 (28%), Positives = 64/150 (42%), Gaps = 10/150 (6%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M K ++ M  A+E +         P GAV   N +I++   NR     D TAHAE+ AIR
Sbjct: 1   MTKEDL-MRKAIELSIRNVAEGGGPFGAVIARNGEIVATGVNRVTPDCDPTAHAEVSAIR 59

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF---- 116
              ++L    L   ++Y + EPC MC  AI  A +  +YYG +      I     F    
Sbjct: 60  AAAKVLGTFDLSGCEIYTSCEPCPMCLGAIYWAHLDCMYYGNNKHDAAAIGFDDAFIYEE 119

Query: 117 YTLATCHHSP--EIYPGISEQRSRQIIQDF 144
             L         E+   +  + + Q  +D+
Sbjct: 120 LDLKPADRKLKSEV---LLPEEAIQAFKDW 146


>gi|229551942|ref|ZP_04440667.1| guanine deaminase [Lactobacillus rhamnosus LMS2-1]
 gi|229314677|gb|EEN80650.1| guanine deaminase [Lactobacillus rhamnosus LMS2-1]
          Length = 167

 Score =  142 bits (360), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 41/107 (38%), Positives = 55/107 (51%), Gaps = 1/107 (0%)

Query: 7   FMSCALEEAQNAAL-RNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           FM+ A EEA+      +  P G V V N +++SRA NR     D TAH EI AIR   + 
Sbjct: 18  FMAMADEEAKANVNGSDGGPFGCVIVKNGQVVSRAHNRVLVDHDPTAHGEITAIRKAGQA 77

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN 112
           L    L   +LY +  PC MC +AI  A I+++YYG +      I  
Sbjct: 78  LGTHDLSGCELYTSAMPCPMCLSAIIWANIKQVYYGNTADDAAAIGF 124


>gi|268591994|ref|ZP_06126215.1| guanine deaminase [Providencia rettgeri DSM 1131]
 gi|291312385|gb|EFE52838.1| guanine deaminase [Providencia rettgeri DSM 1131]
          Length = 155

 Score =  142 bits (360), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 36/113 (31%), Positives = 56/113 (49%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
               F+  A+  A         P GA+ V + ++++   N+  EL D TAHAE++A+R  
Sbjct: 2   SDTQFLQQAINLAMENVRAGGRPFGAIVVCDGQVVASGVNQMLELNDPTAHAELMALRQA 61

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
            + LS+  L +  +Y + +PC MC AAI +A I R+ Y  SN         T 
Sbjct: 62  GQKLSRVKLDDCVVYASGQPCPMCLAAIRMAGISRVVYAYSNDDAAPFGLSTD 114


>gi|163792400|ref|ZP_02186377.1| putative nucleotide deaminase [alpha proteobacterium BAL199]
 gi|159182105|gb|EDP66614.1| putative nucleotide deaminase [alpha proteobacterium BAL199]
          Length = 156

 Score =  142 bits (360), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 41/111 (36%), Positives = 52/111 (46%), Gaps = 1/111 (0%)

Query: 3   KGNVFMSCALEEAQ-NAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
                +  A+E +Q NA      P GAV V +  I+    NR     D TAHAE++AIR 
Sbjct: 2   SDEKHLRRAIELSQGNAEAATGGPFGAVVVRDGMIVGEGANRVITDFDPTAHAEVVAIRA 61

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN 112
            CR L    L    +Y + EPC MC AAI  ARI R+ Y  +      I  
Sbjct: 62  ACRQLGTYDLSGAVIYTSCEPCPMCLAAILWARIDRMVYANTRADAAAIGF 112


>gi|255693462|ref|ZP_05417137.1| guanine deaminase [Bacteroides finegoldii DSM 17565]
 gi|260620746|gb|EEX43617.1| guanine deaminase [Bacteroides finegoldii DSM 17565]
          Length = 156

 Score =  142 bits (360), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 38/121 (31%), Positives = 53/121 (43%), Gaps = 2/121 (1%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAI 59
           M K  + M  A+E ++        P GAV      +I++   NR     D TAHAE+ AI
Sbjct: 1   MTKEEL-MRKAIELSKENIENGGGPFGAVIATKEGEIVATGVNRVTASCDPTAHAEVSAI 59

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
           R     L    L   ++Y + EPC MC  AI  AR+ ++YYG +      I     F   
Sbjct: 60  RAAAAKLGTFNLSGYEIYTSCEPCPMCLGAIYWARLDKMYYGNNKTDAKNIGFDDSFIYD 119

Query: 120 A 120
            
Sbjct: 120 E 120


>gi|94985096|ref|YP_604460.1| tRNA(Ile)-lysidine synthetase-like protein [Deinococcus
           geothermalis DSM 11300]
 gi|94555377|gb|ABF45291.1| tRNA(Ile)-lysidine synthetase-like protein and cytosine deaminase
           [Deinococcus geothermalis DSM 11300]
          Length = 539

 Score =  142 bits (360), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 49/129 (37%), Positives = 70/129 (54%), Gaps = 2/129 (1%)

Query: 22  NEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80
            E+PVGAV +  +  +I R  N +RE  D+T HAE+ A+R     L    L +  L VTL
Sbjct: 403 GEVPVGAVVLGPDGAVIGRGRNTSREHGDMTRHAELAALREAAHSLGTPYLTDCTLVVTL 462

Query: 81  EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140
           EPC MC  AI  AR+ R+ YGA NPK G +   T   T A   H P +  G+    + ++
Sbjct: 463 EPCPMCLGAILEARVGRVVYGAPNPKAGALGGVTDLLT-AHWGHRPAVTGGLRAGEAARL 521

Query: 141 IQDFFKERR 149
           +++ F+  R
Sbjct: 522 LRETFRGLR 530


>gi|116621653|ref|YP_823809.1| guanine deaminase [Candidatus Solibacter usitatus Ellin6076]
 gi|116224815|gb|ABJ83524.1| Guanine deaminase [Candidatus Solibacter usitatus Ellin6076]
          Length = 154

 Score =  142 bits (360), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 43/120 (35%), Positives = 56/120 (46%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           N FM  A+E A     R   P  A+ V +  +I+   N+     D TAHAEI+AIR  CR
Sbjct: 3   NTFMQQAIEMAVANVRRGGGPFAALVVKDGIVIASGANQVTRSNDPTAHAEIVAIREACR 62

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
           +L    LP  ++Y T EPC MC  AI  AR   +YY A++           F      H 
Sbjct: 63  VLGDFQLPGCEIYTTCEPCPMCLGAIYWARPAAVYYAATHQAAALAGFDDSFIYHEIQHP 122


>gi|332285213|ref|YP_004417124.1| cytosine deaminase [Pusillimonas sp. T7-7]
 gi|330429166|gb|AEC20500.1| cytosine deaminase [Pusillimonas sp. T7-7]
          Length = 145

 Score =  142 bits (360), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 38/145 (26%), Positives = 61/145 (42%), Gaps = 12/145 (8%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           + FM  A++EA+       IP+G+V V    II R  NR  +      H E+ A+    R
Sbjct: 2   DDFMKAAIQEARLGLQEGGIPIGSVLVHQGTIIGRGHNRRVQCGSTILHGEMDALENAGR 61

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
             +  +  E  LY TL PC MC  AI L  I ++  G +    GG               
Sbjct: 62  QPAS-VYRESVLYTTLSPCPMCTGAILLYGIPKVVIGENQTFMGG----------EALLG 110

Query: 125 SPEIYPGISEQR-SRQIIQDFFKER 148
           + ++   + +      +++DF K +
Sbjct: 111 AQDVELQVLQDETCIALMRDFIKAK 135


>gi|256374328|ref|YP_003097988.1| CMP/dCMP deaminase zinc-binding [Actinosynnema mirum DSM 43827]
 gi|255918631|gb|ACU34142.1| CMP/dCMP deaminase zinc-binding [Actinosynnema mirum DSM 43827]
          Length = 160

 Score =  142 bits (360), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 46/128 (35%), Positives = 66/128 (51%), Gaps = 2/128 (1%)

Query: 23  EIPVGA-VAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQ-EILPEVDLYVTL 80
           +IP+GA V   +   ++RA N    L D TAHAE+LA+R    +      L    L VT+
Sbjct: 23  DIPIGAAVFGPDGAELARACNARERLGDPTAHAEVLALRAAAAVFGDGWRLGGCTLAVTV 82

Query: 81  EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140
           EPC MCA A+ LAR+ R+ +GA  PK G   +          +H  E+  G+ E     +
Sbjct: 83  EPCAMCAGALVLARVDRVVFGAWEPKTGAAGSLWDVVRDRRLNHRAEVVGGVREAECAAL 142

Query: 141 IQDFFKER 148
           ++DFF  R
Sbjct: 143 MRDFFAGR 150


>gi|152966037|ref|YP_001361821.1| CMP/dCMP deaminase zinc-binding [Kineococcus radiotolerans
           SRS30216]
 gi|151360554|gb|ABS03557.1| CMP/dCMP deaminase zinc-binding [Kineococcus radiotolerans
           SRS30216]
          Length = 161

 Score =  142 bits (360), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 37/131 (28%), Positives = 53/131 (40%)

Query: 6   VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
            F+  A+E A         P GAV V   ++++   NR     D TAHAE+ AIR  CR+
Sbjct: 11  HFLERAVELATKNVAEGGGPFGAVLVRGGELLAAGQNRVTRDNDPTAHAEVQAIREACRL 70

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
                L    LY + EPC MC A+   AR+ R+ Y A            + +        
Sbjct: 71  TGTFSLHGTTLYSSCEPCPMCLASSLWARVDRVVYAADRDDAARGGFDDRTFYELFSTDR 130

Query: 126 PEIYPGISEQR 136
                 + +Q 
Sbjct: 131 ASWSTPVLQQE 141


>gi|153808000|ref|ZP_01960668.1| hypothetical protein BACCAC_02286 [Bacteroides caccae ATCC 43185]
 gi|149129609|gb|EDM20823.1| hypothetical protein BACCAC_02286 [Bacteroides caccae ATCC 43185]
          Length = 156

 Score =  142 bits (360), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 38/121 (31%), Positives = 52/121 (42%), Gaps = 2/121 (1%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVA-VLNNKIISRAGNRNRELKDVTAHAEILAI 59
           M K  + M  A+E ++        P GAV       I++   NR     D TAHAE+ AI
Sbjct: 1   MTKEEL-MRKAIELSKENVENGGGPFGAVIATKEGVIVATGVNRVTTSCDPTAHAEVSAI 59

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
           R     L    L   ++Y + EPC MC  AI  AR+ ++YYG +      I     F   
Sbjct: 60  RAAAAKLGTFDLSGYEIYTSCEPCPMCLGAIYWARLDKMYYGNNKTDAKNIGFDDSFIYD 119

Query: 120 A 120
            
Sbjct: 120 E 120


>gi|313680072|ref|YP_004057811.1| tRNA(ile)-lysidine synthetase [Oceanithermus profundus DSM 14977]
 gi|313152787|gb|ADR36638.1| tRNA(Ile)-lysidine synthetase [Oceanithermus profundus DSM 14977]
          Length = 522

 Score =  142 bits (360), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 50/148 (33%), Positives = 79/148 (53%), Gaps = 7/148 (4%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           ++   +M  AL  A+ AA R E+P+GAV V   + +  + N      + TAHAE+LA+R 
Sbjct: 378 EEDQRWMRRALALAREAARRGEVPIGAVVVREGEELGASANAVEARVNATAHAELLALRA 437

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
                 +++LP   LYVTLEPC MC  A+  AR+ R+ +   NPK G +   T++   A+
Sbjct: 438 AQERAGEKVLPGATLYVTLEPCPMCLGALIEARVGRVVWATENPKAGAV---TRYGMDAS 494

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
                E+  G   + S  +++ FF + R
Sbjct: 495 L----ELEGGRLARESAMLLKGFFADLR 518


>gi|299139283|ref|ZP_07032459.1| Guanine deaminase [Acidobacterium sp. MP5ACTX8]
 gi|298598963|gb|EFI55125.1| Guanine deaminase [Acidobacterium sp. MP5ACTX8]
          Length = 157

 Score =  142 bits (360), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 40/113 (35%), Positives = 56/113 (49%), Gaps = 1/113 (0%)

Query: 1   MKKGNVFMSCALEEAQNAALRN-EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
           M+    FM  A++ A +  +     P GAV V + K+I+   N+     D TAHAE+ AI
Sbjct: 1   MQGNPEFMQQAIQLATDNVVSGRGGPFGAVVVKDGKVIATGANQVTATNDPTAHAEVTAI 60

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN 112
           R  C  L    L   D+Y + EPC MC AA+  +R R +YYG S      +  
Sbjct: 61  RNACTALGHFQLDGCDVYSSCEPCPMCLAALYWSRCRAIYYGNSAADAAKVGF 113


>gi|312078286|ref|XP_003141672.1| tRNA-specific adenosine deaminase 2 [Loa loa]
 gi|307763164|gb|EFO22398.1| tRNA-specific adenosine deaminase 2 [Loa loa]
          Length = 205

 Score =  142 bits (360), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 48/154 (31%), Positives = 85/154 (55%), Gaps = 8/154 (5%)

Query: 1   MKKGNV-FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
           + +  V F++ A E A +A L NE+PVG V V   + ++   N     K+ T HAE++A+
Sbjct: 20  LNEDEVHFLNRAFEIAVDAVLNNEVPVGCVFVFEGQEVAFGRNDVNRTKNPTYHAEMVAL 79

Query: 60  RMGCRILSQ------EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENG 113
            M  +          +++    LYVTLEPC MCA+A+   R++++ YGA+N + GG+ + 
Sbjct: 80  EMMKQWCMDNGHELEDVMRRSTLYVTLEPCIMCASALYHLRLKKILYGAANERFGGLLSV 139

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
                     H  EI P +S  R+ +++++F+++
Sbjct: 140 GTR-EKYGAEHFIEILPNLSVDRAVKLLKEFYEK 172


>gi|283779562|ref|YP_003370317.1| CMP/dCMP deaminase zinc-binding protein [Pirellula staleyi DSM
           6068]
 gi|283438015|gb|ADB16457.1| CMP/dCMP deaminase zinc-binding protein [Pirellula staleyi DSM
           6068]
          Length = 160

 Score =  142 bits (359), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 35/98 (35%), Positives = 50/98 (51%), Gaps = 1/98 (1%)

Query: 4   GNVFMSCALEEAQNAALRN-EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
            + F+  A+E A+         P G+V V   KII R  NR     D +AHAEI+AIR  
Sbjct: 7   DHEFLEAAIELARENVRSGKGGPFGSVVVKEGKIIGRGENRVTSSLDPSAHAEIVAIRDA 66

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
           C+      L    +Y + +PC MC +AI  +RI R+ +
Sbjct: 67  CQQQQNFSLAGTTIYASCQPCPMCLSAIYWSRIDRVVF 104


>gi|294495546|ref|YP_003542039.1| CMP/dCMP deaminase zinc-binding protein [Methanohalophilus mahii
           DSM 5219]
 gi|292666545|gb|ADE36394.1| CMP/dCMP deaminase zinc-binding protein [Methanohalophilus mahii
           DSM 5219]
          Length = 150

 Score =  142 bits (359), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 43/97 (44%), Positives = 57/97 (58%), Gaps = 1/97 (1%)

Query: 8   MSCALEEAQNAALRN-EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  A+E+A+     N   P GAV V +  +ISRA NR  +  D TAHAEI+AIR+    L
Sbjct: 1   MEIAIEQARLGMRNNLGGPFGAVIVKDETVISRAHNRVLDSNDPTAHAEIMAIRIASSKL 60

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
               L E ++Y T  PC MC +A+  ARI+ LYYG +
Sbjct: 61  GTFDLSECEIYTTSYPCPMCMSALYWARIKTLYYGTT 97


>gi|134045717|ref|YP_001097203.1| cytosine deaminase [Methanococcus maripaludis C5]
 gi|132663342|gb|ABO34988.1| Cytosine deaminase [Methanococcus maripaludis C5]
          Length = 145

 Score =  142 bits (359), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 44/145 (30%), Positives = 73/145 (50%), Gaps = 18/145 (12%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           F+  AL+EA+       IP+GAV V  N+II R  NR  +      HAE+ A+    R L
Sbjct: 4   FIDEALKEAKLGLEEGGIPIGAVLVYKNEIIGRGHNRRVQNNSAILHAEMDALENAGR-L 62

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG----IENGTQFYTLATC 122
           + ++    +LY TL PC MC+ A+ L +I+++  G +    G     I+NG         
Sbjct: 63  TSDVYKNCELYTTLSPCIMCSGAVLLYKIKKVIIGENETFLGAENLLIKNGVD------- 115

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKE 147
               E+   ++++R  ++++DF K 
Sbjct: 116 ---VEV---LNDERCVKMMEDFIKN 134


>gi|49075844|gb|AAT49501.1| PA2499 [synthetic construct]
          Length = 152

 Score =  142 bits (359), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 34/109 (31%), Positives = 51/109 (46%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
               FM  A+  A+        P GAV V + ++++R  N+  E  D +AHAE+ AIR  
Sbjct: 2   SDETFMREAIALARANVEAGGRPFGAVLVRDGRVLARGVNQIHETHDPSAHAELQAIRQA 61

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIE 111
            + L    L    +Y +  PC MC AA+ L  I+  ++  SN  G    
Sbjct: 62  SQALGSPRLDGCVIYASGHPCPMCLAAMHLCGIQAAWFAYSNEDGEAFG 110


>gi|15597695|ref|NP_251189.1| deaminase [Pseudomonas aeruginosa PAO1]
 gi|296389082|ref|ZP_06878557.1| putative deaminase [Pseudomonas aeruginosa PAb1]
 gi|9948552|gb|AAG05887.1|AE004677_4 probable deaminase [Pseudomonas aeruginosa PAO1]
          Length = 151

 Score =  142 bits (359), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 34/109 (31%), Positives = 51/109 (46%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
               FM  A+  A+        P GAV V + ++++R  N+  E  D +AHAE+ AIR  
Sbjct: 2   SDETFMREAIALARANVEAGGRPFGAVLVRDGRVLARGVNQIHETHDPSAHAELQAIRQA 61

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIE 111
            + L    L    +Y +  PC MC AA+ L  I+  ++  SN  G    
Sbjct: 62  SQALGSPRLDGCVIYASGHPCPMCLAAMHLCGIQAAWFAYSNEDGEAFG 110


>gi|15241124|ref|NP_198157.1| cytidine/deoxycytidylate deaminase family protein [Arabidopsis
           thaliana]
 gi|14532498|gb|AAK63977.1| AT5g28050/F15F15_120 [Arabidopsis thaliana]
 gi|22137296|gb|AAM91493.1| AT5g28050/F15F15_120 [Arabidopsis thaliana]
 gi|332006385|gb|AED93768.1| cytidine/deoxycytidylate deaminase-like protein [Arabidopsis
           thaliana]
          Length = 185

 Score =  142 bits (359), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 42/112 (37%), Positives = 62/112 (55%), Gaps = 1/112 (0%)

Query: 2   KKGNVFMSCALEEAQNAALRNEI-PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
              + F++ A+EEA       +  P GAV V NN++++   N   +  D TAHAE+ AIR
Sbjct: 28  DSDHKFLTQAVEEAYKGVDCGDGGPFGAVIVHNNEVVASCHNMVLKYTDPTAHAEVTAIR 87

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN 112
             C+ L++  L E ++Y + EPC MC  AI L+R++RL YGA       I  
Sbjct: 88  EACKKLNKIELSECEIYASCEPCPMCFGAIHLSRLKRLVYGAKAEAAIAIGF 139


>gi|325104971|ref|YP_004274625.1| Guanine deaminase [Pedobacter saltans DSM 12145]
 gi|324973819|gb|ADY52803.1| Guanine deaminase [Pedobacter saltans DSM 12145]
          Length = 158

 Score =  142 bits (359), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 45/117 (38%), Positives = 60/117 (51%), Gaps = 1/117 (0%)

Query: 2   KKGNVFMSCALEEAQNAALRN-EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           K+   FM+ A+E+A          P G+V V N KIIS  GN   +  D TAHAEI AIR
Sbjct: 4   KEQREFMNLAIEKASENVKTGKGGPFGSVIVKNGKIISATGNTVNKTCDPTAHAEIAAIR 63

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFY 117
           + C+ L    L   ++Y + EPC MC +AI  A+I +LYY A+            F 
Sbjct: 64  LACQELKSVTLEGCEIYASCEPCPMCLSAIYWAKIDKLYYAATKEDASEAGFDDTFL 120


>gi|330957624|gb|EGH57884.1| cytosine deaminase [Pseudomonas syringae pv. maculicola str.
           ES4326]
          Length = 145

 Score =  142 bits (359), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 42/144 (29%), Positives = 64/144 (44%), Gaps = 10/144 (6%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           + FM  A++EA+       IP+G+V V + KII R  NR  +    T H E+ A+    R
Sbjct: 2   DAFMQAAIDEARLGLDEGGIPIGSVIVHDGKIIGRGHNRRVQEGSPTRHGEMDALENAGR 61

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
             +  +  +  LY TL PC MC+ AI L  IR +  G +    G  E             
Sbjct: 62  QPAS-VYRDAVLYTTLSPCAMCSGAILLYGIRTVIVGENQSFMGEEE----LLRSRGV-- 114

Query: 125 SPEIYPGISEQRSRQIIQDFFKER 148
           S E+   +     + ++Q F K +
Sbjct: 115 SIEV---LDNAECKDMMQGFIKSK 135


>gi|327394833|dbj|BAK12255.1| tRNA-specific adenosine deaminase TadA [Pantoea ananatis AJ13355]
          Length = 98

 Score =  142 bits (359), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 39/87 (44%), Positives = 51/87 (58%)

Query: 2  KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
          ++   +M  AL  AQ A  + E+PVGAV V  +++I    NR     D TAHAEI+A+R 
Sbjct: 11 EQDEYWMRRALTLAQRAWEQGEVPVGAVLVQGDRVIGEGWNRPIGQHDPTAHAEIMALRQ 70

Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAA 88
          G ++L    L    LYVTLEPC MCA 
Sbjct: 71 GGKVLENYRLLNTTLYVTLEPCIMCAG 97


>gi|88812724|ref|ZP_01127970.1| guanine deaminase [Nitrococcus mobilis Nb-231]
 gi|88789962|gb|EAR21083.1| guanine deaminase [Nitrococcus mobilis Nb-231]
          Length = 156

 Score =  142 bits (359), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 38/144 (26%), Positives = 60/144 (41%), Gaps = 4/144 (2%)

Query: 3   KGNVFMSCALEEAQNAALRN-EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
               FM  A++ +    +     P GAV V +  +++   NR     D TAHAE++AIR 
Sbjct: 2   DHAAFMRRAIDLSYEKMIAGIGGPFGAVIVHDGCVVAEGWNRVWSAMDPTAHAEVVAIRR 61

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA- 120
            CRIL    L +  +Y + EPC MC  AI  AR++ +YY  +      I     F     
Sbjct: 62  ACRILETYQLADCSIYTSCEPCPMCLGAIYWARLQVIYYANTRDDAAAIGFDDSFVYDEL 121

Query: 121 --TCHHSPEIYPGISEQRSRQIIQ 142
               +        +    +  + +
Sbjct: 122 ALPLNQRRIPTRRLLGNEAMAVFR 145


>gi|107101945|ref|ZP_01365863.1| hypothetical protein PaerPA_01002992 [Pseudomonas aeruginosa PACS2]
 gi|254235497|ref|ZP_04928820.1| hypothetical protein PACG_01415 [Pseudomonas aeruginosa C3719]
 gi|254240930|ref|ZP_04934252.1| hypothetical protein PA2G_01610 [Pseudomonas aeruginosa 2192]
 gi|126167428|gb|EAZ52939.1| hypothetical protein PACG_01415 [Pseudomonas aeruginosa C3719]
 gi|126194308|gb|EAZ58371.1| hypothetical protein PA2G_01610 [Pseudomonas aeruginosa 2192]
          Length = 151

 Score =  142 bits (359), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 34/109 (31%), Positives = 52/109 (47%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
              +FM  A+  A+        P GAV V + ++++R  N+  E  D +AHAE+ AIR  
Sbjct: 2   SDEIFMREAIALARANVEAGGRPFGAVLVRDGRVLARGVNQIHETHDPSAHAELQAIRQA 61

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIE 111
            + L    L    +Y +  PC MC AA+ L  I+  ++  SN  G    
Sbjct: 62  SQALGSPRLDGCVIYASGHPCPMCLAAMHLCGIQAAWFAYSNEDGEAFG 110


>gi|89519331|gb|ABD75808.1| putative cytosine/adenosine deaminase [uncultured bacterium]
          Length = 163

 Score =  141 bits (358), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 45/142 (31%), Positives = 66/142 (46%), Gaps = 4/142 (2%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
               +M+ AL+EA+ A +R + P+GAV V    II+R+ NR   L+   AHAE  AI   
Sbjct: 9   DHEKYMAEALKEAELAGIRGDKPIGAVIVHGGNIIARSSNRFHTLQSPVAHAETTAI-FA 67

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
           C    ++   E  LY T+EPC MC   I +A IR + +G  +         T  Y     
Sbjct: 68  CAPYLEQYKGECTLYTTVEPCVMCLGTIVIAGIRHIVFGVKDKFMQMDAYFTHPYIRKKV 127

Query: 123 HHSPEIYPGISEQRSRQIIQDF 144
           HH       +      Q++Q +
Sbjct: 128 HHYV---GDVLRDECVQVLQKY 146


>gi|190893255|ref|YP_001979797.1| purine deaminase [Rhizobium etli CIAT 652]
 gi|190698534|gb|ACE92619.1| putative purine deaminase protein [Rhizobium etli CIAT 652]
          Length = 158

 Score =  141 bits (358), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 36/151 (23%), Positives = 67/151 (44%), Gaps = 6/151 (3%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEI-PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
           M+    F+  A+  +++A  +    P G+V V N ++I RA N      D+T HAE+  +
Sbjct: 1   MENHEPFLREAIALSRSAIEQGGGEPFGSVLVKNGEVILRAENSVFSGHDMTNHAEMNLV 60

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI-ENGTQFYT 118
           ++  +      L +  LY + EPC MC+ AI  + I  + +  S  + G I   G    +
Sbjct: 61  KLAAQHYDTAFLADCTLYTSTEPCAMCSGAIYWSGIGHMVFACSETRLGEIAGIGLNVPS 120

Query: 119 LATCHHSPEIYPGI----SEQRSRQIIQDFF 145
                    +   +     E  + ++ Q+F+
Sbjct: 121 RPVLQTGARLVTVVGPTSLEDEAAEVHQEFW 151


>gi|254411343|ref|ZP_05025120.1| Cytidine and deoxycytidylate deaminase zinc-binding region domain
           protein [Microcoleus chthonoplastes PCC 7420]
 gi|196181844|gb|EDX76831.1| Cytidine and deoxycytidylate deaminase zinc-binding region domain
           protein [Microcoleus chthonoplastes PCC 7420]
          Length = 143

 Score =  141 bits (358), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 39/144 (27%), Positives = 66/144 (45%), Gaps = 12/144 (8%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           + FM+ A+ +A+       IP+G+V V   +II +  N+  +  D   HAEI  +R   R
Sbjct: 2   DEFMAAAIAQAKQGLREGGIPIGSVLVKEGQIIGQGYNKRVQDNDPVTHAEIDCLRHAGR 61

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
           I       +  LY TL PC +CA A+    I+++  G S    G  E            H
Sbjct: 62  IG---NYNDTILYSTLMPCYLCAGAVVQFGIKKVIAGESQTFAGAREFMES--------H 110

Query: 125 SPEIYPGISEQRSRQIIQDFFKER 148
             E+   ++ +  +Q++ DF ++ 
Sbjct: 111 GVEVVD-LNLEECQQMMSDFIQQH 133


>gi|199598355|ref|ZP_03211775.1| Cytosine/adenosine deaminase [Lactobacillus rhamnosus HN001]
 gi|199590808|gb|EDY98894.1| Cytosine/adenosine deaminase [Lactobacillus rhamnosus HN001]
          Length = 155

 Score =  141 bits (358), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 41/107 (38%), Positives = 55/107 (51%), Gaps = 1/107 (0%)

Query: 7   FMSCALEEAQNAAL-RNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           FM+ A EEA+      +  P G V V N ++ISRA N+     D TAH EI AIR   + 
Sbjct: 6   FMAMADEEAKANVNGSDGGPFGCVIVKNGQVISRAHNQVLVDHDPTAHGEITAIRKAGQA 65

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN 112
           L    L   +LY +  PC MC +AI  A I+++YYG +      I  
Sbjct: 66  LGTHDLSGCELYTSAMPCPMCLSAIIWANIKQVYYGNTADDAAAIGF 112


>gi|255542370|ref|XP_002512248.1| Guanine deaminase, putative [Ricinus communis]
 gi|223548209|gb|EEF49700.1| Guanine deaminase, putative [Ricinus communis]
          Length = 211

 Score =  141 bits (358), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 43/120 (35%), Positives = 63/120 (52%), Gaps = 2/120 (1%)

Query: 2   KKGNVFMSCALEEAQNAALRNEI-PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
            + + F++ A+EEA       +  P GAV V N++I+    N   +  D TAHAE+ A+R
Sbjct: 54  NRDHKFLTRAVEEAYKGVECGDGGPFGAVVVRNDEIVVSCHNMVLKHTDPTAHAEVTAVR 113

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
             C+ L +  L + ++Y + EPC MC  AI L+RI+RL YGA       I     F   A
Sbjct: 114 EACKKLDRIELSDCEIYASCEPCPMCFGAIHLSRIKRLVYGAKAEAAIAIGF-DDFIADA 172


>gi|258508144|ref|YP_003170895.1| guanine deaminase [Lactobacillus rhamnosus GG]
 gi|258539359|ref|YP_003173858.1| guanine deaminase [Lactobacillus rhamnosus Lc 705]
 gi|257148071|emb|CAR87044.1| Guanine deaminase [Lactobacillus rhamnosus GG]
 gi|257151035|emb|CAR90007.1| Guanine deaminase [Lactobacillus rhamnosus Lc 705]
 gi|259649462|dbj|BAI41624.1| deaminase [Lactobacillus rhamnosus GG]
          Length = 155

 Score =  141 bits (358), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 41/107 (38%), Positives = 55/107 (51%), Gaps = 1/107 (0%)

Query: 7   FMSCALEEAQNAAL-RNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           FM+ A EEA+      +  P G V V N +++SRA NR     D TAH EI AIR   + 
Sbjct: 6   FMAMADEEAKANVNGSDGGPFGCVIVKNGQVVSRAHNRVLVDHDPTAHGEITAIRKAGQA 65

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN 112
           L    L   +LY +  PC MC +AI  A I+++YYG +      I  
Sbjct: 66  LGTHDLSGCELYTSAMPCPMCLSAIIWANIKQVYYGNTADDAAAIGF 112


>gi|116050443|ref|YP_790738.1| putative deaminase [Pseudomonas aeruginosa UCBPP-PA14]
 gi|115585664|gb|ABJ11679.1| putative deaminase [Pseudomonas aeruginosa UCBPP-PA14]
          Length = 151

 Score =  141 bits (358), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 34/109 (31%), Positives = 51/109 (46%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
               FM  A+  A+        P GAV V + ++++R  N+  E  D +AHAE+ AIR  
Sbjct: 2   SDETFMREAIALARANVEAGGRPFGAVLVRDGRVLARGVNQIHETHDPSAHAELQAIRQA 61

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIE 111
            + L    L    +Y +  PC MC AA+ L  I+  ++  SN  G    
Sbjct: 62  SQALGSPHLDGCVIYASGHPCPMCLAAMHLCGIQAAWFAYSNEDGEAFG 110


>gi|328463817|gb|EGF35361.1| guanine deaminase [Lactobacillus rhamnosus MTCC 5462]
          Length = 127

 Score =  141 bits (358), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 41/107 (38%), Positives = 55/107 (51%), Gaps = 1/107 (0%)

Query: 7   FMSCALEEAQNAAL-RNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           FM+ A EEA+      +  P G V V N ++ISRA N+     D TAH EI AIR   + 
Sbjct: 6   FMAMANEEAKANVNGSDGGPFGCVIVKNGQVISRAHNQVLVDHDPTAHGEITAIRKAGQA 65

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN 112
           L    L   +LY +  PC MC +AI  A I+++YYG +      I  
Sbjct: 66  LGTHDLSGCELYTSAMPCPMCLSAIIWANIKQVYYGNTADDAAAIGF 112


>gi|308177840|ref|YP_003917246.1| nucleoside deaminase-like protein [Arthrobacter arilaitensis Re117]
 gi|307745303|emb|CBT76275.1| nucleoside deaminase-like protein [Arthrobacter arilaitensis Re117]
          Length = 156

 Score =  141 bits (357), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 40/114 (35%), Positives = 57/114 (50%), Gaps = 1/114 (0%)

Query: 4   GNVFMSCALEEAQNAALRNE-IPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
               M  A++++  A   ++  P GAV VL  K+IS A N      D TAHAEI AIR  
Sbjct: 3   DPQLMQAAIDQSLLALEADDSGPFGAVVVLEGKVISAACNSVVGSMDPTAHAEINAIRAA 62

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116
            ++L    L E +LY + EPC MC  AI  +R + +Y+  +  +   I     F
Sbjct: 63  GQVLGSFDLSECELYTSCEPCPMCLGAIYWSRFKHVYFANNREEAAAIGFDDDF 116


>gi|240168511|ref|ZP_04747170.1| hypothetical protein MkanA1_04312 [Mycobacterium kansasii ATCC
           12478]
          Length = 152

 Score =  141 bits (357), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 49/129 (37%), Positives = 69/129 (53%), Gaps = 2/129 (1%)

Query: 23  EIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQ-EILPEVDLYVTL 80
           ++P+GAV V  +   +SRA N    L D TAHAEILA+R    +L     L    L VT+
Sbjct: 22  DVPIGAVVVGADGTELSRAVNAREALGDPTAHAEILALRAAAAVLGDGWRLEGTTLAVTV 81

Query: 81  EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140
           EPCTMCA A+ LAR+ RL +GA  PK G + +          +H P++  G+        
Sbjct: 82  EPCTMCAGALVLARVARLVFGAWEPKTGAVGSLWDVVRDRRLNHRPQVRGGVLAADCAAP 141

Query: 141 IQDFFKERR 149
           ++ FF  +R
Sbjct: 142 LEGFFARQR 150


>gi|297570087|ref|YP_003691431.1| CMP/dCMP deaminase zinc-binding protein [Desulfurivibrio
           alkaliphilus AHT2]
 gi|296926002|gb|ADH86812.1| CMP/dCMP deaminase zinc-binding protein [Desulfurivibrio
           alkaliphilus AHT2]
          Length = 173

 Score =  141 bits (357), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 48/153 (31%), Positives = 71/153 (46%), Gaps = 10/153 (6%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTA---HAEILA 58
           ++ + FM  ALE+A+ A    E PVGAV V   ++++   NR            HAEI+A
Sbjct: 5   EQHHYFMGLALEQARVALQAGEFPVGAVIVAGGRVVAEG-NRQNSGGTAPTELDHAEIVA 63

Query: 59  IRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
           +R       +     + LY T+EPC MC A + L  +RR+ Y   +  GGG         
Sbjct: 64  LRGLLARQPEIERGGLTLYATMEPCLMCYATLLLNGVRRIVYAYEDAMGGG--TSLPLTE 121

Query: 119 LATCH----HSPEIYPGISEQRSRQIIQDFFKE 147
           L   +     + EI P I  + S  + QDFF+ 
Sbjct: 122 LNPLYREMAPAVEITPHIRRRESLALFQDFFRR 154


>gi|218460046|ref|ZP_03500137.1| CMP/dCMP deaminase zinc-binding protein [Rhizobium etli Kim 5]
          Length = 187

 Score =  141 bits (357), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 36/150 (24%), Positives = 66/150 (44%), Gaps = 5/150 (3%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M+    F+  A+  +++A    + P G+V V +  +I RA N      D+T HAE+  ++
Sbjct: 1   MENHEPFLREAIALSKSAMANGDEPFGSVLVRDGDVILRAENSVFTGHDMTNHAEMNLVK 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI-ENGTQFYTL 119
           +  +      L +  LY + EPC MC+ AI  + I  + +  S  + G I   G    + 
Sbjct: 61  LAAKHYDPAFLADCTLYTSTEPCAMCSGAIYWSGIGHMVFACSETRLGEIAGIGLNVPSR 120

Query: 120 ATCHHSPEIYPGI----SEQRSRQIIQDFF 145
           A           +     E  + ++ Q+F+
Sbjct: 121 AVLQSGARTVTVVGPTNLEDEAAEVHQEFW 150


>gi|160883688|ref|ZP_02064691.1| hypothetical protein BACOVA_01660 [Bacteroides ovatus ATCC 8483]
 gi|260170907|ref|ZP_05757319.1| cytidine/deoxycytidylate deaminase [Bacteroides sp. D2]
 gi|293369917|ref|ZP_06616489.1| guanine deaminase [Bacteroides ovatus SD CMC 3f]
 gi|299146282|ref|ZP_07039350.1| guanine deaminase [Bacteroides sp. 3_1_23]
 gi|315919237|ref|ZP_07915477.1| conserved hypothetical protein [Bacteroides sp. D2]
 gi|156110773|gb|EDO12518.1| hypothetical protein BACOVA_01660 [Bacteroides ovatus ATCC 8483]
 gi|292634999|gb|EFF53519.1| guanine deaminase [Bacteroides ovatus SD CMC 3f]
 gi|298516773|gb|EFI40654.1| guanine deaminase [Bacteroides sp. 3_1_23]
 gi|313693112|gb|EFS29947.1| conserved hypothetical protein [Bacteroides sp. D2]
          Length = 156

 Score =  141 bits (357), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 37/121 (30%), Positives = 54/121 (44%), Gaps = 2/121 (1%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAI 59
           M + ++ M  A+E ++        P GAV      +I++   NR     D TAHAE+ AI
Sbjct: 1   MTREDL-MRKAIELSKENVENGGGPFGAVIATKEGEIVATGVNRVTASCDPTAHAEVSAI 59

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
           R     L    L   ++Y + EPC MC  AI  AR+ ++YYG +      I     F   
Sbjct: 60  RAAAAKLGTFNLSGYEIYTSCEPCPMCLGAIYWARLDKMYYGNNKTDAKNIGFDDSFIYD 119

Query: 120 A 120
            
Sbjct: 120 E 120


>gi|257080390|ref|ZP_05574751.1| conserved hypothetical protein [Enterococcus faecalis E1Sol]
 gi|256988420|gb|EEU75722.1| conserved hypothetical protein [Enterococcus faecalis E1Sol]
          Length = 158

 Score =  141 bits (356), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 41/151 (27%), Positives = 67/151 (44%), Gaps = 4/151 (2%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           K+   F+  A+  A+ +  +   P GA+ V +N I+    N+     D T HAE   IR 
Sbjct: 5   KQDERFIMQAISLAEASKNQGNEPFGAILVKDNTIVFTNENQIHIKSDPTFHAEHGLIRE 64

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS----NPKGGGIENGTQFY 117
            C+      L E  LY + EPC MC+ AI  +++ RL + A     +   G  E      
Sbjct: 65  FCQKYKITDLSEYTLYSSCEPCFMCSGAIVWSKLGRLVFSAYAKDLDSILGEKEESPCLL 124

Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDFFKER 148
                   P++  G+   +  QI++D+F + 
Sbjct: 125 VFEHSVWKPQVSGGVLRDKGVQILKDYFSDH 155


>gi|158523013|ref|YP_001530883.1| CMP/dCMP deaminase zinc-binding [Desulfococcus oleovorans Hxd3]
 gi|158511839|gb|ABW68806.1| CMP/dCMP deaminase zinc-binding [Desulfococcus oleovorans Hxd3]
          Length = 168

 Score =  141 bits (356), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 41/146 (28%), Positives = 63/146 (43%), Gaps = 2/146 (1%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELK--DVTAHAEILAIR 60
               FM+ AL++A+ A    E PVG V      +++    +       + T HAEI+A+R
Sbjct: 2   DHQHFMTIALKQARQALDAGEFPVGCVIADGKTVVATGARQGTRQNRFNETDHAEIVALR 61

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
               +        + LY TLEPC MC  AI +  I ++ YG  +  GGG           
Sbjct: 62  NLATLDPAPDRAGLVLYSTLEPCLMCFGAILIHGISKIVYGCEDMMGGGTGCDLSALPPL 121

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFK 146
                 EI  G+   +S  + + FF+
Sbjct: 122 YREKRVEILAGVMRAQSLALFKAFFQ 147


>gi|297582578|ref|YP_003698358.1| CMP/dCMP deaminase zinc-binding protein [Bacillus selenitireducens
           MLS10]
 gi|297141035|gb|ADH97792.1| CMP/dCMP deaminase zinc-binding protein [Bacillus selenitireducens
           MLS10]
          Length = 152

 Score =  141 bits (356), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 40/149 (26%), Positives = 64/149 (42%), Gaps = 5/149 (3%)

Query: 1   MKKGN-VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
           M+K    FM  A++ A+ A      P GA+ V + +++ R  N      D T HAE+  I
Sbjct: 1   MEKTEAYFMKQAIDLAKRAREEGNEPFGAILVKDGEVVMRGANHIHSGSDPTFHAELGLI 60

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPK----GGGIENGTQ 115
           R  C       L E  LY + EPC MC+ A+  A + ++ Y  S+ +     GG      
Sbjct: 61  RAYCSAYQVSDLSEYTLYTSCEPCVMCSGAMVWANLGKVVYSVSHDQLAEIAGGNIMIAC 120

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDF 144
                   + PE+   I  +   Q+ + +
Sbjct: 121 RDVFQKSPNRPEVEGPICPEEGLQVFEGY 149


>gi|222445686|ref|ZP_03608201.1| hypothetical protein METSMIALI_01327 [Methanobrevibacter smithii
           DSM 2375]
 gi|222435251|gb|EEE42416.1| hypothetical protein METSMIALI_01327 [Methanobrevibacter smithii
           DSM 2375]
          Length = 158

 Score =  141 bits (356), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 42/145 (28%), Positives = 65/145 (44%), Gaps = 12/145 (8%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M     F++ AL EA+ +     IP+GAV V + KIISR  NR  +   V  HAEI  I 
Sbjct: 1   MYDDTYFINEALNEAKKSLAEGGIPIGAVLVKDGKIISRGHNRLIQNDSVILHAEIDTIE 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              R+  ++ L    LY TL PC MC+ AI L  I ++  G +    G      +     
Sbjct: 61  NAGRLNHEDYLQ-SVLYTTLSPCPMCSGAILLYNIPKVVIGENTTLMGAECLLEK----- 114

Query: 121 TCHHSPEIYPGISEQ-RSRQIIQDF 144
              +  E+   +      +++ + +
Sbjct: 115 ---NGVEVV--VLNNLECKKLFEKY 134


>gi|312794193|ref|YP_004027116.1| riboflavin biosynthesis protein ribd [Caldicellulosiruptor
           kristjanssonii 177R1B]
 gi|312181333|gb|ADQ41503.1| riboflavin biosynthesis protein RibD [Caldicellulosiruptor
           kristjanssonii 177R1B]
          Length = 371

 Score =  140 bits (355), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 44/152 (28%), Positives = 68/152 (44%), Gaps = 18/152 (11%)

Query: 3   KGNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
             + +M+ ALE A+ A   +     VG V V N  II +  ++    K    HAE+LAI 
Sbjct: 5   SHSYYMNMALELAKKASPLVLPNPRVGCVIVKNGTIIGKGYHQKYGEK----HAEVLAIE 60

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
               I +  +L    +YV+LEPC        C  AI  + I+++     +P      NG 
Sbjct: 61  DA--IKNGYLLKNATMYVSLEPCCHFGKQPPCTEAIIKSGIKKVVVATRDPNPLVNGNGI 118

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
           Q        H  E+  G+ ++ +  I +DFFK
Sbjct: 119 QILKQ----HGIEVVEGVLQKEAESINKDFFK 146


>gi|313107393|ref|ZP_07793584.1| putative deaminase [Pseudomonas aeruginosa 39016]
 gi|310880086|gb|EFQ38680.1| putative deaminase [Pseudomonas aeruginosa 39016]
          Length = 151

 Score =  140 bits (355), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 34/105 (32%), Positives = 51/105 (48%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
               FM  A+  A+        P GAV V + ++++R  N+  E  D +AHAE+ AIR  
Sbjct: 2   SDETFMREAIALARANVEAGGRPFGAVLVRDGRVLARGVNQIHETHDPSAHAELQAIRQA 61

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKG 107
            + L    L    +Y +  PC MC AA+ L  I+  ++  SN  G
Sbjct: 62  SQALGSPRLDGCVIYASGHPCPMCLAAMHLCGIQAAWFAYSNEDG 106


>gi|187250528|ref|YP_001875010.1| cytosine/adenosine deaminase [Elusimicrobium minutum Pei191]
 gi|186970688|gb|ACC97673.1| Cytosine/adenosine deaminase [Elusimicrobium minutum Pei191]
          Length = 163

 Score =  140 bits (355), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 37/115 (32%), Positives = 54/115 (46%), Gaps = 3/115 (2%)

Query: 2   KKGNVFMSCALEEAQNAALRN-EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           K    F+  A++ A+         P GAV V + K++++  NR     D + HAE+ AIR
Sbjct: 8   KLHIKFLRAAVKMAEKGVKAGKGGPFGAVIVKDGKMVAKGYNRVTSSNDPSLHAEVDAIR 67

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
             C+ L    L    +Y + EPC MC  AI  AR + LY+ A   K    + G  
Sbjct: 68  KACKKLGSFELTGCIIYSSCEPCPMCLGAIYWARPKALYFAA--DKHTAAKYGFD 120


>gi|18266045|gb|AAL67435.1|AF458409_1 deoxycytidine deaminase [Brassica oleracea]
          Length = 185

 Score =  140 bits (355), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 42/112 (37%), Positives = 61/112 (54%), Gaps = 1/112 (0%)

Query: 2   KKGNVFMSCALEEAQNAALRNEI-PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
              + F++ A+EEA       +  P GAV V  N++++   N   +  D TAHAE+ AIR
Sbjct: 28  DSDHKFLTQAVEEAYKGVDCGDGGPFGAVIVHKNEVVASCHNMVLKYTDPTAHAEVTAIR 87

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN 112
             C+ L+Q  L E ++Y + EPC MC  AI L+R++RL YGA       I  
Sbjct: 88  EACKKLNQIELSECEIYASCEPCPMCFGAIHLSRLKRLVYGAKAEAAIAIGF 139


>gi|261345369|ref|ZP_05973013.1| guanine deaminase [Providencia rustigianii DSM 4541]
 gi|282566412|gb|EFB71947.1| guanine deaminase [Providencia rustigianii DSM 4541]
          Length = 154

 Score =  140 bits (355), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 35/105 (33%), Positives = 53/105 (50%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
             N F+  A+  A         P GAV V +  +++   N+  E  D TAHAE+LA+R  
Sbjct: 2   TDNQFLQQAILLATENVNAGGRPFGAVVVYDGSVVATGVNQMLERNDPTAHAELLALRQA 61

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKG 107
             +L +  L +  +Y + +PC MC AA+ +A I R+ Y  SN   
Sbjct: 62  GEVLGKVRLDDCVVYASGQPCPMCLAAMRMAGISRIVYAYSNQDA 106


>gi|218891523|ref|YP_002440390.1| putative deaminase [Pseudomonas aeruginosa LESB58]
 gi|218771749|emb|CAW27523.1| probable deaminase [Pseudomonas aeruginosa LESB58]
          Length = 151

 Score =  140 bits (355), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 34/105 (32%), Positives = 52/105 (49%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
              +FM  A+  A+        P GAV V + ++++R  N+  E  D +AHAE+ AIR  
Sbjct: 2   SDEIFMREAIALARANVEAGGRPFGAVLVRDGRVLARGVNQIHETHDPSAHAELQAIRQA 61

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKG 107
            + L    L    +Y +  PC MC AA+ L  I+  ++  SN  G
Sbjct: 62  SQALGSPRLDGCVIYASGHPCPMCLAAMHLCGIQAAWFAYSNEDG 106


>gi|91085973|ref|XP_971753.1| PREDICTED: similar to tRNA-specific adenosine-34 deaminase subunit
           Tad2p/ADAT2, putative [Tribolium castaneum]
          Length = 160

 Score =  140 bits (355), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 40/145 (27%), Positives = 63/145 (43%), Gaps = 9/145 (6%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  A + A  A    E+PVG + V NN  I+   N   + K+ T HAEI  I        
Sbjct: 1   MERAFQHAYEALAAQEVPVGCIFVHNNTEIAFGRNTVNQTKNATRHAEINCIEQVTDYCK 60

Query: 68  Q------EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
                  +    V ++VT+EPC MC  A+   +++ + +G  N + GG    T F     
Sbjct: 61  TNNFNLIDFFKGVTVFVTVEPCIMCINALFDLQVQTIVFGCRNDRFGG---RTVFDVAGV 117

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFK 146
            H    I  G     +  ++++F+K
Sbjct: 118 VHPKTIIKGGFRADEAMNLLKEFYK 142


>gi|308272592|emb|CBX29196.1| hypothetical protein N47_J01770 [uncultured Desulfobacterium sp.]
          Length = 172

 Score =  140 bits (355), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 49/152 (32%), Positives = 70/152 (46%), Gaps = 9/152 (5%)

Query: 1   MK-KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNREL----KDVTAHAE 55
           MK     FM  AL  AQ A  + E PVG V V  +KII+    +         +   HAE
Sbjct: 1   MKMDHEYFMEKALNLAQTALEQGEFPVGCVLVHKDKIIATG--KREGTAKSVLNEVDHAE 58

Query: 56  ILAIRM-GCRILSQEI-LPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENG 113
           I+A+R         EI   E+ +Y T+EPC MC  AI LA I ++ +   +  GGG    
Sbjct: 59  IIALRNLAGMKDYNEISRQEIIIYCTMEPCLMCFGAILLAGIGKIVFAYEDVMGGGTNCN 118

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
           T+  +     +   I PG+  + S  I + +F
Sbjct: 119 TKDLSPLYKDNKISITPGVLRKESLNIFKMYF 150


>gi|281421106|ref|ZP_06252105.1| guanine deaminase [Prevotella copri DSM 18205]
 gi|281404641|gb|EFB35321.1| guanine deaminase [Prevotella copri DSM 18205]
          Length = 155

 Score =  140 bits (355), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 39/116 (33%), Positives = 53/116 (45%), Gaps = 1/116 (0%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M K  + M  A+E ++N+      P GAV   +  II+ A N      D TAHAE+  IR
Sbjct: 1   MTKEEL-MHRAIELSKNSVKTGGGPFGAVIAKDGIIIAEASNSVTIDLDPTAHAEVNCIR 59

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116
              R L    L   ++Y + EPC MC  AI  A + R+YY         I    +F
Sbjct: 60  QATRKLKTFNLEGCEIYTSCEPCPMCLGAIYWAHLDRIYYANDRKDAAKIGFDDEF 115


>gi|222624837|gb|EEE58969.1| hypothetical protein OsJ_10660 [Oryza sativa Japonica Group]
          Length = 169

 Score =  140 bits (355), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 46/159 (28%), Positives = 70/159 (44%), Gaps = 32/159 (20%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           FM  ALE+A+ A    E+PVG V V + K               T HAE+ AI +  R  
Sbjct: 8   FMELALEQAKFALDNLEVPVGCVIVEDGK--------------ATRHAEMEAIDILLREW 53

Query: 67  SQ---------EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFY 117
                      E     DLYVT EPC MCA A+S+  IR +Y+G +N K GG  +    +
Sbjct: 54  QGMGLDQPQVAEKFARCDLYVTCEPCIMCAMALSILGIREVYFGCANDKFGGCGSIMSLH 113

Query: 118 TLATC---------HHSPEIYPGISEQRSRQIIQDFFKE 147
             ++              +   GI  + +  + ++F+++
Sbjct: 114 QSSSAELSGEEIPGPKGYKCTGGIMAEEAVALFRNFYEQ 152


>gi|297813065|ref|XP_002874416.1| cytidine/deoxycytidylate deaminase family protein [Arabidopsis
           lyrata subsp. lyrata]
 gi|297320253|gb|EFH50675.1| cytidine/deoxycytidylate deaminase family protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 185

 Score =  140 bits (355), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 40/112 (35%), Positives = 61/112 (54%), Gaps = 1/112 (0%)

Query: 2   KKGNVFMSCALEEAQNAALRNEI-PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
              + F++ A+EEA       +  P GAV V  +++++   N   +  D TAHAE+ AIR
Sbjct: 28  DSDHKFLTQAVEEAYKGVDCGDGGPFGAVIVHKDEVVASCHNMVLKYTDPTAHAEVTAIR 87

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN 112
             C+ L++  L E ++Y + EPC MC  AI L+R++RL YGA       I  
Sbjct: 88  EACKKLNKIELSECEIYASCEPCPMCFGAIHLSRLKRLVYGAKAEAAIAIGF 139


>gi|313683576|ref|YP_004061314.1| cmp/dcmp deaminase zinc-binding protein [Sulfuricurvum kujiense DSM
           16994]
 gi|313156436|gb|ADR35114.1| CMP/dCMP deaminase zinc-binding protein [Sulfuricurvum kujiense DSM
           16994]
          Length = 152

 Score =  140 bits (355), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 42/110 (38%), Positives = 54/110 (49%), Gaps = 3/110 (2%)

Query: 5   NVFMSCALEEAQNAALRNEI-PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
           N +M+ A +EA      NE  P GA  V N  +I+ A N   +  D TAHAEI  IR   
Sbjct: 2   NTWMAIARDEALKGMDSNEGGPFGAAIVRNGSLIAAAHNEVLKSNDPTAHAEINVIRKAS 61

Query: 64  RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGA--SNPKGGGIE 111
             L+   L +  LY T  PC MC  AI  ARI  +YY +   +   GG +
Sbjct: 62  EKLATYDLSDCVLYTTCYPCPMCLGAILWARIPTVYYASTMDDAARGGFD 111


>gi|17232126|ref|NP_488674.1| hypothetical protein alr4634 [Nostoc sp. PCC 7120]
 gi|17133771|dbj|BAB76333.1| alr4634 [Nostoc sp. PCC 7120]
          Length = 140

 Score =  140 bits (355), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 43/141 (30%), Positives = 62/141 (43%), Gaps = 8/141 (5%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
             FM  A+ EA+      + P GAV V +N++++ A N      D +AHAEI  IR    
Sbjct: 4   EYFMRLAIAEAKK----GDAPYGAVIVKDNQVVAFAHNTVARDNDPSAHAEINVIRRLTA 59

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS-NPKGGGIENGTQFY---TLA 120
            L    L    +Y T EPC MCAAA   + I  + YGAS        ++  Q      +A
Sbjct: 60  QLQSFSLAGYSIYTTGEPCPMCAAACVWSGIAEIIYGASIQDLILANQSQIQISCEEVIA 119

Query: 121 TCHHSPEIYPGISEQRSRQII 141
               + ++  GI  Q    + 
Sbjct: 120 KSLRNIKVTKGILRQECLNLF 140


>gi|152988290|ref|YP_001348100.1| putative deaminase [Pseudomonas aeruginosa PA7]
 gi|150963448|gb|ABR85473.1| probable deaminase [Pseudomonas aeruginosa PA7]
          Length = 151

 Score =  140 bits (355), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 36/103 (34%), Positives = 53/103 (51%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
             FM  A+  A+        P GAV V + ++++R  N+  E  D +AHAE+ AIR   R
Sbjct: 4   ETFMREAIALARANVEAGGRPFGAVLVRDGQVLARGVNQTHESHDPSAHAELQAIRQASR 63

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKG 107
           +L    L   ++Y +  PC MC AA+ L  IR  ++  SN  G
Sbjct: 64  LLGSPRLDGCEIYASGHPCPMCLAAMHLCGIRAAWFAYSNEDG 106


>gi|313682141|ref|YP_004059879.1| cmp/dcmp deaminase zinc-binding protein [Sulfuricurvum kujiense DSM
           16994]
 gi|313155001|gb|ADR33679.1| CMP/dCMP deaminase zinc-binding protein [Sulfuricurvum kujiense DSM
           16994]
          Length = 145

 Score =  140 bits (355), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 44/141 (31%), Positives = 63/141 (44%), Gaps = 12/141 (8%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           + FM  AL EAQ       IP+G+V V N KII R  NR  +   V  H E+ A+    R
Sbjct: 2   DPFMKEALLEAQKGLEEGGIPIGSVLVHNGKIIGRGHNRRIQKGSVILHGEMDALENAGR 61

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
            LS  +  E  LY TL PC MC+ AI+L  I ++  G  N    G E   +         
Sbjct: 62  -LSASLYKECTLYTTLSPCPMCSGAIALYGIPKVVVG-ENENFMGEE---ELLQSRG--- 113

Query: 125 SPEIYPGISEQR-SRQIIQDF 144
              +   +       +++++F
Sbjct: 114 ---VTIDVLNDHNCIEMMKNF 131


>gi|282163607|ref|YP_003355992.1| putative deaminase [Methanocella paludicola SANAE]
 gi|282155921|dbj|BAI61009.1| putative deaminase [Methanocella paludicola SANAE]
          Length = 154

 Score =  140 bits (354), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 39/147 (26%), Positives = 69/147 (46%), Gaps = 6/147 (4%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
               +M  A+E+A+      ++P GA  V + K++  A N     K++TAHAEI  I   
Sbjct: 2   NDEDYMRLAIEKAREGVRHGQLPFGACIVKDGKVVGCAHNTILRDKNLTAHAEINTIHEA 61

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGA--SNPKGGG---IENGTQFY 117
           C +     L    +Y T EPC MC  A+ LA I R+ YGA  S+ K  G   ++   + +
Sbjct: 62  CHVFDSLDLSGCTIYCTCEPCPMCLGALGLANIDRIVYGARISDVKMDGYVVLDTPGELF 121

Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDF 144
           ++            + ++ +  + +++
Sbjct: 122 SIIG-DGKISARGNVLKEENLVLFREW 147


>gi|226504812|ref|NP_001140513.1| hypothetical protein LOC100272576 [Zea mays]
 gi|194699798|gb|ACF83983.1| unknown [Zea mays]
 gi|195610442|gb|ACG27051.1| cytidine/deoxycytidylate deaminase family protein [Zea mays]
          Length = 186

 Score =  140 bits (354), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 42/112 (37%), Positives = 61/112 (54%), Gaps = 1/112 (0%)

Query: 2   KKGNVFMSCALEEAQNAALRNEI-PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
            + + F+S A+EEA       +  P GAV V N+++I    N   +  D TAHAE+ AIR
Sbjct: 29  DRDHKFLSKAVEEAYRGVDCGDGGPFGAVVVHNDEVIVSCHNMVLKNTDPTAHAEVTAIR 88

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN 112
             C+ L +  L + ++Y + EPC MC  A+ L+RI+RL YGA       I  
Sbjct: 89  EACKKLGKIELSDCEIYASCEPCPMCFGAVHLSRIKRLVYGAKAEAAIAIGF 140


>gi|217071302|gb|ACJ84011.1| unknown [Medicago truncatula]
          Length = 181

 Score =  140 bits (354), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 43/112 (38%), Positives = 61/112 (54%), Gaps = 1/112 (0%)

Query: 2   KKGNVFMSCALEEAQNAAL-RNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
            + + F+  A+EEA       +  P GAV VLN+++I+   N      D +AHAE+ AIR
Sbjct: 24  DRDHKFLRKAVEEAYKGVECEDGGPFGAVIVLNDEVIASCHNMVLRNTDPSAHAEVTAIR 83

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN 112
             C+ L Q  L E ++Y + EPC MC  AI L+R++RL YGA       I  
Sbjct: 84  EACKKLKQIELSECEIYASCEPCPMCFGAIHLSRVKRLVYGAKAEAAIAIGF 135


>gi|119511953|ref|ZP_01631050.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [Nodularia
           spumigena CCY9414]
 gi|119463373|gb|EAW44313.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [Nodularia
           spumigena CCY9414]
          Length = 143

 Score =  140 bits (354), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 42/141 (29%), Positives = 63/141 (44%), Gaps = 8/141 (5%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
             FM  ALEEA+      + P GAV V + ++++ A N  +   D +AHAEI  IR    
Sbjct: 4   EYFMQIALEEAKK----GDAPYGAVIVKHQEVVAVAHNTVKGNSDPSAHAEINVIRSLTA 59

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI-ENGTQFY---TLA 120
            L    L    +Y T EPC MCA A   A I  + YGAS      + ++         +A
Sbjct: 60  KLKSPSLEGYSIYTTGEPCPMCATACVWAGISEIVYGASIQDLISVNQSQIDITCEEVIA 119

Query: 121 TCHHSPEIYPGISEQRSRQII 141
               + ++  GI +    ++ 
Sbjct: 120 KSFRNIKVTRGILKHECLELF 140


>gi|304405271|ref|ZP_07386931.1| CMP/dCMP deaminase zinc-binding [Paenibacillus curdlanolyticus YK9]
 gi|304346150|gb|EFM11984.1| CMP/dCMP deaminase zinc-binding [Paenibacillus curdlanolyticus YK9]
          Length = 172

 Score =  140 bits (354), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 47/149 (31%), Positives = 72/149 (48%), Gaps = 4/149 (2%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
             ++M  A++ A     R E P GA  V N+++I+ A NR    KD T HAE++AIR  C
Sbjct: 9   DRMYMRQAVDCAMEGTQRMEFPFGACLVHNDRVIAIASNRCLSSKDPTMHAEMIAIREAC 68

Query: 64  RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC- 122
             L +  L +  LY T EPC MC  AI  A I R+ YG +      +       +  T  
Sbjct: 69  GTLDRASLQQATLYATTEPCVMCMGAIHWAGIPRIVYGLTIEDSMVLGFKEIQLSARTIA 128

Query: 123 -HHSPEIY--PGISEQRSRQIIQDFFKER 148
            H + E+    G+  +  +Q+  ++ + R
Sbjct: 129 AHAAYEMTLKGGVLTEECQQLFHNWNRSR 157


>gi|22298002|ref|NP_681249.1| cytosine deaminase [Thermosynechococcus elongatus BP-1]
 gi|22294180|dbj|BAC08011.1| cytosine deaminase [Thermosynechococcus elongatus BP-1]
          Length = 193

 Score =  140 bits (354), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 40/143 (27%), Positives = 66/143 (46%), Gaps = 12/143 (8%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           + FM+ A+ EA+       IP+G+V V + +II R  N+  +      HAEI  +    R
Sbjct: 46  DEFMAAAIAEAEQGLQEGGIPIGSVLVRHGQIIGRGHNQRVQRGSPILHAEIDCLANAGR 105

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
           I       +  LY TL PC +CA A+    I+++  G S    G  E            H
Sbjct: 106 IG---RYDDTVLYSTLMPCYLCAGAVVQFGIKKVIAGESQTFAGAREFMEA--------H 154

Query: 125 SPEIYPGISEQRSRQIIQDFFKE 147
             E+   ++ +R +Q+++DF  +
Sbjct: 155 GVEVID-LNLERCQQLMRDFIAQ 176


>gi|218516430|ref|ZP_03513270.1| putative purine deaminase protein [Rhizobium etli 8C-3]
          Length = 158

 Score =  140 bits (354), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 37/151 (24%), Positives = 68/151 (45%), Gaps = 6/151 (3%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEI-PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
           M+    F+  A+  +++A  +    P G+V V N ++I RA N      D+T HAE+  +
Sbjct: 1   MENHEPFLREAIALSRSAIEQGGGEPFGSVLVKNGEVILRAENSVFSGHDMTNHAEMNLV 60

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI-ENGTQFYT 118
           ++  +      L +  LY + EPC MC+ AI  + I  + +  S  + G I   G    +
Sbjct: 61  KLAAQHYDTAFLADCTLYTSTEPCAMCSGAIYWSGIGHMVFACSETRLGEIAGIGLNVPS 120

Query: 119 LATCHHSPEIYPGI----SEQRSRQIIQDFF 145
            A       +   +     E  + ++ Q+F+
Sbjct: 121 RAVLQTGARLVTVVGPTSLEDEAAEVHQEFW 151


>gi|256392662|ref|YP_003114226.1| CMP/dCMP deaminase zinc-binding [Catenulispora acidiphila DSM
           44928]
 gi|256358888|gb|ACU72385.1| CMP/dCMP deaminase zinc-binding [Catenulispora acidiphila DSM
           44928]
          Length = 223

 Score =  140 bits (354), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 37/121 (30%), Positives = 51/121 (42%), Gaps = 4/121 (3%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           + ++  A+  AQ+       P GAV V +  +I+   N      D TAHAE+LAIR  CR
Sbjct: 74  DDWLGQAIALAQDNVEAGGWPFGAVIVRDGAVIATGVNEVLADGDPTAHAEMLAIREACR 133

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN----GTQFYTLA 120
           +L    L    LY + EPC MC AAI  A +  + Y A                  +   
Sbjct: 134 VLKDINLAGAVLYASCEPCPMCLAAIKWAGLTGIVYAADRESSARAGFPDKEIYDLFDQP 193

Query: 121 T 121
            
Sbjct: 194 R 194


>gi|218663270|ref|ZP_03519200.1| CMP/dCMP deaminase zinc-binding protein [Rhizobium etli IE4771]
          Length = 157

 Score =  140 bits (354), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 36/150 (24%), Positives = 66/150 (44%), Gaps = 5/150 (3%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M+    F+  A+  +++A    + P G+V V +  +I RA N      D+T HAE+  ++
Sbjct: 1   MENHEPFLREAIALSKSAMANGDEPFGSVLVRDGDVILRAENSVFTGHDMTNHAEMNLVK 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI-ENGTQFYTL 119
           +  +      L +  LY + EPC MC+ AI  + I  + +  S  + G I   G    + 
Sbjct: 61  LAAKHYDPAFLADCTLYTSTEPCAMCSGAIYWSGIGHMVFACSETRLGEIAGIGLNVPSR 120

Query: 120 ATCHHSPEIYPGI----SEQRSRQIIQDFF 145
           A           +     E  + ++ Q+F+
Sbjct: 121 AVLQSGARAVTVVGPTSLEDEAAEVHQEFW 150


>gi|148243600|ref|YP_001228757.1| nucleoside deaminase [Synechococcus sp. RCC307]
 gi|147851910|emb|CAK29404.1| Nucleoside deaminase [Synechococcus sp. RCC307]
          Length = 163

 Score =  140 bits (354), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 44/122 (36%), Positives = 58/122 (47%), Gaps = 10/122 (8%)

Query: 2   KKGNVFMSCALEEAQN-AALR--NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
            +   FM+ A+E ++  A      E P GAV V +  +I+  GN      D TAHAEI A
Sbjct: 5   DQHEQFMAQAIEISRQTALEERSGE-PFGAVIVRDGVVIAAEGNSVNGDSDPTAHAEINA 63

Query: 59  IRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
           IR   R L    L    LY +   C MC  A   A IR++YYGA      G E+ + FY 
Sbjct: 64  IRAAGRALGTWDLSGCVLYASSRCCPMCYGAAHWAGIRKIYYGA------GWEDYSDFYD 117

Query: 119 LA 120
            +
Sbjct: 118 DS 119


>gi|172038865|ref|YP_001805366.1| cytosine deaminase [Cyanothece sp. ATCC 51142]
 gi|171700319|gb|ACB53300.1| probable cytosine deaminase [Cyanothece sp. ATCC 51142]
          Length = 150

 Score =  140 bits (354), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 40/143 (27%), Positives = 63/143 (44%), Gaps = 12/143 (8%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           + FM  A+ EA+       IP+G+V V +NKII R  N+  +  D   HAEI  +R   R
Sbjct: 9   DEFMKAAIAEAKQGLKTGGIPIGSVLVKHNKIIGRGHNKRVQDGDPITHAEIDCLRNAGR 68

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
           I       +  LY TL PC +CA A+    I+++  G S    G  +            H
Sbjct: 69  IG---NYQDTVLYSTLMPCYLCAGAVVQFNIKKVIAGESKTFTGAKQFMES--------H 117

Query: 125 SPEIYPGISEQRSRQIIQDFFKE 147
             E+         + +++ F ++
Sbjct: 118 GVEVIDLDLA-ECQDLMKQFIEK 139


>gi|148643446|ref|YP_001273959.1| cytosine deaminase [Methanobrevibacter smithii ATCC 35061]
 gi|261349766|ref|ZP_05975183.1| cytosine deaminase [Methanobrevibacter smithii DSM 2374]
 gi|148552463|gb|ABQ87591.1| cytosine deaminase [Methanobrevibacter smithii ATCC 35061]
 gi|288860550|gb|EFC92848.1| cytosine deaminase [Methanobrevibacter smithii DSM 2374]
          Length = 158

 Score =  140 bits (354), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 42/145 (28%), Positives = 66/145 (45%), Gaps = 12/145 (8%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M     F++ AL+EA+ +     IP+GAV V + KIISR  NR  +   V  HAEI  I 
Sbjct: 1   MYDDTYFINEALKEAKKSLAEGGIPIGAVLVKDGKIISRGHNRLIQNDSVILHAEIDTIE 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              R+  ++ L    LY TL PC MC+ AI L  I ++  G +    G      +     
Sbjct: 61  NAGRLNHEDYLQ-SVLYTTLSPCPMCSGAILLYNIPKVIIGENTTLMGAECLLEK----- 114

Query: 121 TCHHSPEIYPGISEQ-RSRQIIQDF 144
              +  E+   +      +++ + +
Sbjct: 115 ---NGVEVV--VLNNLECKKLFEKY 134


>gi|326428921|gb|EGD74491.1| tRNA-specific adenosine deaminase [Salpingoeca sp. ATCC 50818]
          Length = 191

 Score =  140 bits (353), Expect = 8e-32,   Method: Composition-based stats.
 Identities = 42/147 (28%), Positives = 68/147 (46%), Gaps = 9/147 (6%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKII-SRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  A+ EAQ A    E+PVG V V +N  + +   N+     + T HAE++A        
Sbjct: 1   MEAAVAEAQRALAEGEVPVGCVFVDDNGNVQAAGRNQTNIEHNATRHAELVAFDDCVARC 60

Query: 67  S------QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
                  ++I+    LYVT+EPC MCA A+ L  + R+ +G  N + GG  +     T  
Sbjct: 61  GGDVEKAKDIVASCTLYVTVEPCVMCAYALRLLGVTRVVFGCHNDRFGGCGSTMDVATCE 120

Query: 121 TCH--HSPEIYPGISEQRSRQIIQDFF 145
           T       ++  G    R+  +++ F+
Sbjct: 121 TPDGLPKLQLEAGPMRTRAINLLKLFY 147


>gi|255625685|gb|ACU13187.1| unknown [Glycine max]
          Length = 186

 Score =  140 bits (353), Expect = 8e-32,   Method: Composition-based stats.
 Identities = 41/112 (36%), Positives = 61/112 (54%), Gaps = 1/112 (0%)

Query: 2   KKGNVFMSCALEEAQNAAL-RNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           ++ + F+  A+EEA       +  P GA+ V N++I++R  N      D TAHAE+  IR
Sbjct: 29  QRDHKFLRIAVEEAYKGVDCEDGGPFGAIIVCNDEIVARCHNMVLRNTDPTAHAEVTVIR 88

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN 112
             C  L+Q  L + ++Y + EPC MC  AI L+R++RL YGA       I  
Sbjct: 89  KACEKLNQIELSDCEIYASCEPCPMCFGAIHLSRVKRLVYGAKAEAAIAIGF 140


>gi|294495182|ref|YP_003541675.1| CMP/dCMP deaminase zinc-binding protein [Methanohalophilus mahii
           DSM 5219]
 gi|292666181|gb|ADE36030.1| CMP/dCMP deaminase zinc-binding protein [Methanohalophilus mahii
           DSM 5219]
          Length = 147

 Score =  140 bits (353), Expect = 8e-32,   Method: Composition-based stats.
 Identities = 42/144 (29%), Positives = 64/144 (44%), Gaps = 14/144 (9%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           + FM  A+ EA     +  IP+G+V V +  II R  N   +  D  AHAEI  +R   R
Sbjct: 2   DQFMKEAINEAMAGRDKGGIPIGSVLVRDGMIIGRGHNLRVQNDDPLAHAEISCMRDAGR 61

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
           I S     +  LY TL PC +CA A+    I+++  G S    G       F        
Sbjct: 62  IGS---YADTVLYSTLMPCYLCAGAVVQFGIKKVVVGESETFEGA----QDFLRSKG--- 111

Query: 125 SPEIYP-GISEQRSRQIIQDFFKE 147
             E+   G+     + ++++F +E
Sbjct: 112 -VEVVDLGL--SECKTLMKEFIRE 132


>gi|222528581|ref|YP_002572463.1| riboflavin biosynthesis protein RibD [Caldicellulosiruptor bescii
           DSM 6725]
 gi|222455428|gb|ACM59690.1| riboflavin biosynthesis protein RibD [Caldicellulosiruptor bescii
           DSM 6725]
          Length = 371

 Score =  140 bits (353), Expect = 8e-32,   Method: Composition-based stats.
 Identities = 43/152 (28%), Positives = 67/152 (44%), Gaps = 18/152 (11%)

Query: 3   KGNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
             + +M+ ALE A+ A   +     VG V V N  +I +  ++    K    HAE+LAI 
Sbjct: 5   SHSYYMNMALELAKKASPLVLPNPRVGCVIVKNGTVIGKGYHQKYGEK----HAEVLAIE 60

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
               I +  +L    +YVTLEPC        C  AI  + I+++     +P       G 
Sbjct: 61  DA--IKNGYLLKNATMYVTLEPCCHFGKQPPCTDAIIKSGIKKVVVATKDPNPLVNGKGI 118

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
           Q        H  E+  G+ ++ +  I +DFFK
Sbjct: 119 QILKQ----HGIEVIEGVLQKEAESINKDFFK 146


>gi|146278266|ref|YP_001168425.1| CMP/dCMP deaminase, zinc-binding [Rhodobacter sphaeroides ATCC
           17025]
 gi|145556507|gb|ABP71120.1| CMP/dCMP deaminase, zinc-binding [Rhodobacter sphaeroides ATCC
           17025]
          Length = 114

 Score =  140 bits (353), Expect = 8e-32,   Method: Composition-based stats.
 Identities = 64/112 (57%), Positives = 78/112 (69%), Gaps = 1/112 (0%)

Query: 38  SRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRR 97
           +RAGNR REL D TAHAE+LAIR  C  L  E L   DLYVTLEPC MCAAAIS ARI R
Sbjct: 2   ARAGNRCRELSDPTAHAEMLAIRAACAELG-ERLTGCDLYVTLEPCPMCAAAISAARIAR 60

Query: 98  LYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
           LYYGA++PK GG+  G + +    CHH P++Y GI E+ +  +++ FF  RR
Sbjct: 61  LYYGAADPKSGGVAQGARVFAHPQCHHVPDVYDGIREEEAAALLRGFFAARR 112


>gi|8778532|gb|AAF79540.1|AC023673_28 F21D18.9 [Arabidopsis thaliana]
          Length = 331

 Score =  140 bits (353), Expect = 9e-32,   Method: Composition-based stats.
 Identities = 37/132 (28%), Positives = 60/132 (45%), Gaps = 12/132 (9%)

Query: 28  AVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM-GCRILSQ--------EILPEVDLYV 78
            V + + K+I+   NR  E ++ T HAE+ AI     +            E   +  LYV
Sbjct: 183 CVFLEDGKVIASGRNRTNETRNATRHAEMEAIDQLVGQWQKDGLSPSQVAEKFSKCVLYV 242

Query: 79  TLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFY---TLATCHHSPEIYPGISEQ 135
           T EPC MCA+A+S   I+ +YYG  N K GG  +    +     A      +   GI  +
Sbjct: 243 TCEPCIMCASALSFLGIKEVYYGCPNDKFGGCGSILSLHLGSEEAQRGKGYKCRGGIMAE 302

Query: 136 RSRQIIQDFFKE 147
            +  + + F+++
Sbjct: 303 EAVSLFKCFYEQ 314


>gi|153008613|ref|YP_001369828.1| zinc-binding CMP/dCMP deaminase [Ochrobactrum anthropi ATCC 49188]
 gi|151560501|gb|ABS13999.1| CMP/dCMP deaminase zinc-binding [Ochrobactrum anthropi ATCC 49188]
          Length = 156

 Score =  140 bits (353), Expect = 9e-32,   Method: Composition-based stats.
 Identities = 34/107 (31%), Positives = 55/107 (51%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M     ++  A+  A +   +   P GAV V   K+I+   NR +   D TAHAE+LA+R
Sbjct: 1   MSNDRTYLDQAIRLAFDNVEQGGRPFGAVVVKGGKVIATGVNRMQADCDPTAHAELLALR 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKG 107
              + L    L   ++Y + +PC MC AA+ +A I ++ +  SN + 
Sbjct: 61  AAGKTLQSPRLDGCEVYASGQPCPMCFAAMRMAGIEKIRFAYSNEQA 107


>gi|268317845|ref|YP_003291564.1| CMP/dCMP deaminase zinc-binding protein [Rhodothermus marinus DSM
           4252]
 gi|262335379|gb|ACY49176.1| CMP/dCMP deaminase zinc-binding protein [Rhodothermus marinus DSM
           4252]
          Length = 155

 Score =  140 bits (353), Expect = 9e-32,   Method: Composition-based stats.
 Identities = 37/116 (31%), Positives = 51/116 (43%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
             F+   +  A+    R   P  A+ V + ++++   NR     D TAHAEI+AIR  CR
Sbjct: 4   EAFIREVIRLAEANVRRGGGPFAALVVRDGEVLAAGTNRVTTDNDPTAHAEIVAIREACR 63

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
            L    L   DLY + EPC MC  AI  AR  R++Y A+                 
Sbjct: 64  RLGHFQLTGCDLYTSCEPCPMCLGAIYWARPARVFYAATRHDAARAGFDDALIYDE 119


>gi|88604201|ref|YP_504379.1| CMP/dCMP deaminase, zinc-binding [Methanospirillum hungatei JF-1]
 gi|88189663|gb|ABD42660.1| CMP/dCMP deaminase, zinc-binding protein [Methanospirillum hungatei
           JF-1]
          Length = 274

 Score =  140 bits (353), Expect = 9e-32,   Method: Composition-based stats.
 Identities = 42/145 (28%), Positives = 63/145 (43%), Gaps = 12/145 (8%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
            + FM  A++EA+       IP+G+V V +  II R  NR  +  D   HAEI  ++   
Sbjct: 131 DDPFMEAAIQEAEKGKEEGGIPIGSVLVRDGVIIGRGHNRRVQNNDPMVHAEIDCLQNAG 190

Query: 64  RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123
           RI S     +  LY TL PC +CA A+    I R+  G S    G  E            
Sbjct: 191 RIGS---YQDCILYSTLMPCFLCAGAVVQFHIPRVIVGESRTFSGAREFMEA-------- 239

Query: 124 HSPEIYPGISEQRSRQIIQDFFKER 148
           H   +       R + +++ F +E+
Sbjct: 240 HGVTVIDYDL-NRCQMMMETFIREK 263


>gi|108763474|ref|YP_633568.1| putative guanine deaminase [Myxococcus xanthus DK 1622]
 gi|108467354|gb|ABF92539.1| putative guanine deaminase [Myxococcus xanthus DK 1622]
          Length = 153

 Score =  140 bits (353), Expect = 9e-32,   Method: Composition-based stats.
 Identities = 38/107 (35%), Positives = 54/107 (50%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
             FM  A+  A+        P GA+ V + ++I+RA N   + KD TAHAE+LAIR   +
Sbjct: 6   EEFMREAIALARTNVKSGGRPFGALLVRDGRVIARAVNEVNQTKDPTAHAELLAIRNASQ 65

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIE 111
            L    L    +Y +  PC MC AA+ L  I+  Y+  SN +G    
Sbjct: 66  SLGSASLSGCVVYASGHPCPMCLAAMYLCGIQGAYFAYSNEEGEAFG 112


>gi|319956637|ref|YP_004167900.1| cmp/dcmp deaminase zinc-binding protein [Nitratifractor salsuginis
           DSM 16511]
 gi|319419041|gb|ADV46151.1| CMP/dCMP deaminase zinc-binding protein [Nitratifractor salsuginis
           DSM 16511]
          Length = 155

 Score =  140 bits (353), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 41/116 (35%), Positives = 54/116 (46%), Gaps = 1/116 (0%)

Query: 5   NVFMSCALEEAQNAALRN-EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
             ++  A+ EA+         P GAV V   +I+S A N      D TAHAEILAIR+  
Sbjct: 4   EEYLQIAIGEARKGVEAGHGGPFGAVIVYRGEIVSTAHNEVVLRNDPTAHAEILAIRLAG 63

Query: 64  RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
             L +  L    LY T EPC MC +AI  A + R+ Y  +  +   I     F T 
Sbjct: 64  EKLQRFHLNGCTLYCTGEPCPMCFSAIHWAHLDRVIYCNTKEEAAKIGFDDTFITE 119


>gi|312877999|ref|ZP_07737939.1| riboflavin biosynthesis protein RibD [Caldicellulosiruptor
           lactoaceticus 6A]
 gi|311795234|gb|EFR11623.1| riboflavin biosynthesis protein RibD [Caldicellulosiruptor
           lactoaceticus 6A]
          Length = 371

 Score =  139 bits (352), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 43/152 (28%), Positives = 68/152 (44%), Gaps = 18/152 (11%)

Query: 3   KGNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
             + +M+ AL+ A+ A   +     VG V V N  II +  ++    K    HAE+LAI 
Sbjct: 5   SHSYYMNMALDLAKKASPLVLPNPRVGCVIVKNGTIIGKGYHQKYGEK----HAEVLAIE 60

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
               I +  +L    +YV+LEPC        C  AI  + I+++     +P      NG 
Sbjct: 61  DA--IKNGYLLKNATMYVSLEPCCHFGKQPPCTEAIIKSGIKKVVVATRDPNPLVNGNGI 118

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
           Q        H  E+  G+ ++ +  I +DFFK
Sbjct: 119 QILKQ----HGIEVVEGVLQKEAESINKDFFK 146


>gi|94312654|ref|YP_585863.1| CMP/dCMP deaminase [Cupriavidus metallidurans CH34]
 gi|93356506|gb|ABF10594.1| CMP/dCMP deaminase [Cupriavidus metallidurans CH34]
          Length = 156

 Score =  139 bits (352), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 33/103 (32%), Positives = 52/103 (50%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
             ++  A+E A+    +   P GAV V + ++I+   N+     D TAHAE+ AIR   +
Sbjct: 7   ERYLGEAIELARTNLEQGGRPFGAVIVKDGEVIATGVNQILSTNDPTAHAELTAIRAASQ 66

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKG 107
            L    L    +Y +  PC MC AA+ +A ++ + Y  SN  G
Sbjct: 67  KLGSPSLDGCAVYASGHPCPMCMAAMRMAGVKEVTYAYSNDDG 109


>gi|149538332|ref|XP_001507477.1| PREDICTED: similar to DEADC1 protein, partial [Ornithorhynchus
           anatinus]
          Length = 121

 Score =  139 bits (352), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 41/115 (35%), Positives = 56/115 (48%), Gaps = 6/115 (5%)

Query: 15  AQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL------SQ 68
           AQ A    E+PVG + V NNKI+    N   E K+ T HAE++AI               
Sbjct: 1   AQEALENGEVPVGCLMVYNNKIVGMGRNEVNETKNATRHAEMVAIDQVLNWCLRRGKNPT 60

Query: 69  EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123
           E+     LYVT+EPC MCAAA+ + RI  + YG  N + GG  +     +    +
Sbjct: 61  EVFQRTVLYVTVEPCIMCAAALRIMRIPLVVYGCQNERFGGCGSVLNISSDDLPN 115


>gi|218295213|ref|ZP_03496049.1| tRNA(Ile)-lysidine synthetase [Thermus aquaticus Y51MC23]
 gi|218244416|gb|EED10941.1| tRNA(Ile)-lysidine synthetase [Thermus aquaticus Y51MC23]
          Length = 509

 Score =  139 bits (352), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 49/148 (33%), Positives = 69/148 (46%), Gaps = 16/148 (10%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
            +    M  ALEEA+ A    E+PVGAV VL  ++     NR   ++D TAHAE+L +R 
Sbjct: 372 SEEEGLMGLALEEARKAYAEGEVPVGAVLVLEGEVHGE-RNRVEAMEDPTAHAEMLLLRK 430

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
             +      L     YVTLEPC MC  A+  A +  + YG  N K G +    Q   +  
Sbjct: 431 LGKRARGGRL-----YVTLEPCRMCHHALMEAGV-EVVYGVENLKEGALTRYGQGGRMR- 483

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKERR 149
                    G+ E    ++++DFF   R
Sbjct: 484 --------GGLREGECAKLLRDFFARLR 503


>gi|77164674|ref|YP_343199.1| cytidine/deoxycytidylate deaminase, zinc-binding region
           [Nitrosococcus oceani ATCC 19707]
 gi|254434877|ref|ZP_05048385.1| Cytidine and deoxycytidylate deaminase zinc-binding region domain
           protein [Nitrosococcus oceani AFC27]
 gi|76882988|gb|ABA57669.1| Cytidine/deoxycytidylate deaminase, zinc-binding region
           [Nitrosococcus oceani ATCC 19707]
 gi|207091210|gb|EDZ68481.1| Cytidine and deoxycytidylate deaminase zinc-binding region domain
           protein [Nitrosococcus oceani AFC27]
          Length = 190

 Score =  139 bits (352), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 37/149 (24%), Positives = 68/149 (45%), Gaps = 6/149 (4%)

Query: 2   KKGNVFMSCALEEAQNAALRNEI-PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           ++   +M  A+E ++ A    +  P G+V     +I+    NR+   +D +AHAEI AIR
Sbjct: 34  ERATQWMRRAIELSRKAMELGDGFPFGSVIAKEGEIVGEGWNRSWVNRDPSAHAEIEAIR 93

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQ---FY 117
             C+ L    L   D+Y + +PC MC AAI  A   R+++G ++     ++        Y
Sbjct: 94  DACKRLDTLSLEGCDVYASAQPCPMCIAAIYWAGADRIFFGNNDRDIAALDPNLDATFIY 153

Query: 118 TL--ATCHHSPEIYPGISEQRSRQIIQDF 144
                     P     +  + + ++ +D+
Sbjct: 154 QALTKPAERRPVTERELLREEAMEVFRDY 182


>gi|126659190|ref|ZP_01730328.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [Cyanothece
           sp. CCY0110]
 gi|126619495|gb|EAZ90226.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [Cyanothece
           sp. CCY0110]
          Length = 143

 Score =  139 bits (352), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 42/146 (28%), Positives = 63/146 (43%), Gaps = 10/146 (6%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
               FM  AL EA+      ++P GA+ V N++II R  N  +   DV+AH EI  +R  
Sbjct: 2   NHEKFMREALVEAKK----GDLPYGAILVNNDEIIMRGYNTAQRDNDVSAHGEINVLRAM 57

Query: 63  CRILSQ--EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
            + +    + L    LY T EPC MCAAA   A +  + +GAS  +   +       T  
Sbjct: 58  TQKIGYSLDSLKNYTLYTTCEPCPMCAAACVWAGVSHIVFGASTEQLISLGTQQINLTCQ 117

Query: 121 TC----HHSPEIYPGISEQRSRQIIQ 142
                     +I  GI  +    + +
Sbjct: 118 NVVTQGFQDIQITGGILAEECLDLFK 143


>gi|326499113|dbj|BAK06047.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 186

 Score =  139 bits (352), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 44/112 (39%), Positives = 62/112 (55%), Gaps = 1/112 (0%)

Query: 2   KKGNVFMSCALEEAQNAALRN-EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
            K + F+S A+EEA  A       P GAV V N+++++   N   +  D TAHAE+ AIR
Sbjct: 29  DKEHKFLSIAVEEAYRAVDCGHGRPFGAVVVRNDQVVASCHNMVLKNTDPTAHAEVTAIR 88

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN 112
             CR L +  L + ++Y + EP  MC  A+ L+RI+RL YGA      GI  
Sbjct: 89  EACRKLGKIDLSDCEMYASCEPFPMCFGAVRLSRIKRLVYGAKAEAAVGIGF 140


>gi|116494635|ref|YP_806369.1| cytosine/adenosine deaminase [Lactobacillus casei ATCC 334]
 gi|227535386|ref|ZP_03965435.1| guanine deaminase [Lactobacillus paracasei subsp. paracasei ATCC
           25302]
 gi|239631766|ref|ZP_04674797.1| cytosine/adenosine deaminase [Lactobacillus paracasei subsp.
           paracasei 8700:2]
 gi|116104785|gb|ABJ69927.1| Cytosine/adenosine deaminase [Lactobacillus casei ATCC 334]
 gi|227186982|gb|EEI67049.1| guanine deaminase [Lactobacillus paracasei subsp. paracasei ATCC
           25302]
 gi|239526231|gb|EEQ65232.1| cytosine/adenosine deaminase [Lactobacillus paracasei subsp.
           paracasei 8700:2]
          Length = 155

 Score =  139 bits (352), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 39/107 (36%), Positives = 55/107 (51%), Gaps = 1/107 (0%)

Query: 7   FMSCALEEAQNAAL-RNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           FM+ A EEA+      +  P G V + + K++SRA N+     D TAH EI AIR   + 
Sbjct: 6   FMAMANEEAKANVNGSDGGPFGCVIIKDGKVVSRAHNQVLVDHDPTAHGEITAIRKAGQA 65

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN 112
           L    L   +LY +  PC MC +AI  A I+++YYG +      I  
Sbjct: 66  LGTHDLTGCELYTSAMPCPMCLSAIIWANIKQVYYGNTADDAAAIGF 112


>gi|323136503|ref|ZP_08071585.1| CMP/dCMP deaminase, zinc-binding [Methylocystis sp. ATCC 49242]
 gi|322398577|gb|EFY01097.1| CMP/dCMP deaminase, zinc-binding [Methylocystis sp. ATCC 49242]
          Length = 189

 Score =  139 bits (352), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 38/143 (26%), Positives = 62/143 (43%), Gaps = 8/143 (5%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
               +M  AL+EA     R + P GAV     ++++   N  +   D TAH E++AIR  
Sbjct: 45  DDERYMRIALDEA----ARGDFPFGAVIEKGGRVLATGHNSGKSTNDPTAHGEMVAIRNF 100

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS----NPKGGGIENGTQFYT 118
            +      L    +Y T EPC MC  AI     RR+ + AS    + + G I   ++   
Sbjct: 101 IKSHPSAELNGATIYTTGEPCPMCMGAIIWCGFRRVVFAASIQELSTRLGQIMVTSETVA 160

Query: 119 LATCHHSPEIYPGISEQRSRQII 141
            A    + +I  G+  + +  + 
Sbjct: 161 AAASFANIDITGGVFAKEALALF 183


>gi|149278879|ref|ZP_01885014.1| cytidine/deoxycytidylate deaminase family protein [Pedobacter sp.
           BAL39]
 gi|149230498|gb|EDM35882.1| cytidine/deoxycytidylate deaminase family protein [Pedobacter sp.
           BAL39]
          Length = 168

 Score =  139 bits (352), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 35/116 (30%), Positives = 58/116 (50%), Gaps = 1/116 (0%)

Query: 2   KKGNVFMSCALEEAQNAALRN-EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           ++   FM  A++ ++   +     P GA  V   ++I+++ N+     D TAHAE+ AIR
Sbjct: 12  EQHAAFMKIAIDASEENVISGKGTPFGAAIVKEGQLIAKSANKVTADNDPTAHAEVAAIR 71

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116
           + C+ L+   L    +Y + EPC MC AAI  ++I  +YYG +            F
Sbjct: 72  IACQELNTYDLTGCVIYTSCEPCPMCLAAIYWSKISVVYYGNTRSDAAQAGFDDDF 127


>gi|300120277|emb|CBK19831.2| unnamed protein product [Blastocystis hominis]
          Length = 155

 Score =  139 bits (352), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 45/147 (30%), Positives = 70/147 (47%), Gaps = 20/147 (13%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI--RM 61
            + ++  A EEA  A    E+P+G V V +               + T HAE++AI   +
Sbjct: 7   DDKYLELAYEEANVAFEEREVPIGCVFVKD---------------NATLHAEMVAISRTL 51

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
           G       I     LYVT+EPC MCA+AI+   + R+ +GASN + GG  +    +    
Sbjct: 52  GANGNDPTIFEGSTLYVTIEPCIMCASAIAQIGVSRVVFGASNDRFGGCGSVLSLHDQNE 111

Query: 122 C---HHSPEIYPGISEQRSRQIIQDFF 145
               H   E+   I ++RS +I+Q F+
Sbjct: 112 FSAGHKHYEVTRHIQKERSIEILQRFY 138


>gi|301066190|ref|YP_003788213.1| cytosine/adenosine deaminase [Lactobacillus casei str. Zhang]
 gi|300438597|gb|ADK18363.1| Cytosine/adenosine deaminase [Lactobacillus casei str. Zhang]
          Length = 155

 Score =  139 bits (351), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 39/107 (36%), Positives = 55/107 (51%), Gaps = 1/107 (0%)

Query: 7   FMSCALEEAQNAAL-RNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           FM+ A EEA+      +  P G V + + K++SRA N+     D TAH EI AIR   + 
Sbjct: 6   FMAMANEEAKANVNGSDGGPFGCVIIKDGKVVSRAHNQVLVDHDPTAHGEITAIRKAGQA 65

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN 112
           L    L   +LY +  PC MC +AI  A I+++YYG +      I  
Sbjct: 66  LGTHDLTGCELYTSAMPCPMCLSAIIWANIKQVYYGNTADDAAAIGF 112


>gi|327192975|gb|EGE59890.1| putative purine deaminase protein [Rhizobium etli CNPAF512]
          Length = 158

 Score =  139 bits (351), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 37/151 (24%), Positives = 67/151 (44%), Gaps = 6/151 (3%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEI-PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
           M+    F+  A+  +++A  +    P G+V V N ++I RA N      D+T HAE+  +
Sbjct: 1   MENHEPFLREAIALSRSAIEQGGGEPFGSVLVKNGEVILRAENSVFSGHDMTNHAEMNLV 60

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI-ENGTQFYT 118
           ++  +      L +  LY + EPC MC+ AI  + I  + +  S  + G I   G    +
Sbjct: 61  KLAAQHYDTAFLADCTLYTSTEPCAMCSGAIYWSGIGHMVFACSETRLGEIAGIGLNVPS 120

Query: 119 LATCHHSPEIYPGI----SEQRSRQIIQDFF 145
            A           +     E  + ++ Q+F+
Sbjct: 121 RAVLQTGARFVTVVGPTSLEDEAAEVHQEFW 151


>gi|261879068|ref|ZP_06005495.1| guanine deaminase [Prevotella bergensis DSM 17361]
 gi|270334349|gb|EFA45135.1| guanine deaminase [Prevotella bergensis DSM 17361]
          Length = 155

 Score =  139 bits (351), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 36/116 (31%), Positives = 53/116 (45%), Gaps = 1/116 (0%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M K  + M  A+  ++ + +    P GAV   N  +++ A N      D TAHAE+ AIR
Sbjct: 1   MDKTEL-MRRAIVLSEKSVMTGGGPFGAVIARNGVVLAEASNSVTIDHDPTAHAEVNAIR 59

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116
           + C  L    L   ++Y + EPC MC  AI  AR+  +YY  +      I      
Sbjct: 60  VACDRLHTFDLSGCEIYCSCEPCPMCLGAIYWARLDHIYYANNRKAAASIGFDDDL 115


>gi|191638132|ref|YP_001987298.1| Guanine deaminase [Lactobacillus casei BL23]
 gi|190712434|emb|CAQ66440.1| Guanine deaminase [Lactobacillus casei BL23]
 gi|327382160|gb|AEA53636.1| Cytidine/deoxycytidylate deaminase [Lactobacillus casei LC2W]
 gi|327385358|gb|AEA56832.1| Cytidine/deoxycytidylate deaminase [Lactobacillus casei BD-II]
          Length = 155

 Score =  139 bits (351), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 39/107 (36%), Positives = 55/107 (51%), Gaps = 1/107 (0%)

Query: 7   FMSCALEEAQNAAL-RNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           FM+ A EEA+      +  P G V + + K++SRA N+     D TAH EI AIR   + 
Sbjct: 6   FMAMANEEAKANVNGSDGGPFGCVIIKDGKVVSRAHNQVLVDHDPTAHGEITAIRKAGQA 65

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN 112
           L    L   +LY +  PC MC +AI  A I+++YYG +      I  
Sbjct: 66  LGTHDLTGCELYTSAMPCPMCLSAIIWANIKQVYYGNTADDAAAIGF 112


>gi|116075283|ref|ZP_01472543.1| hypothetical protein RS9916_27024 [Synechococcus sp. RS9916]
 gi|116067480|gb|EAU73234.1| hypothetical protein RS9916_27024 [Synechococcus sp. RS9916]
          Length = 159

 Score =  139 bits (351), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 32/124 (25%), Positives = 54/124 (43%), Gaps = 8/124 (6%)

Query: 2   KKGNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
            +    M  A+   ++A    +   P GAV   + ++++ AGN      D +AHAE+ AI
Sbjct: 4   DQDQTLMREAIRLMRDAGVVKKTGGPFGAVVAKDGEVVAAAGNSVVRDLDPSAHAEVNAI 63

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
           R  C+ L    L    +Y + E C MC A    A IR ++Y A         + +  ++ 
Sbjct: 64  RAACKKLGTWDLSGCVMYTSCECCPMCYATAYWAGIRTVFYAA------AWSDYSDLFSD 117

Query: 120 ATCH 123
              +
Sbjct: 118 QAIN 121


>gi|333031276|ref|ZP_08459337.1| Guanine deaminase [Bacteroides coprosuis DSM 18011]
 gi|332741873|gb|EGJ72355.1| Guanine deaminase [Bacteroides coprosuis DSM 18011]
          Length = 155

 Score =  139 bits (351), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 37/116 (31%), Positives = 54/116 (46%), Gaps = 1/116 (0%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M K  + M  A+  +     R+  P GAV   + +I++   NR  +  D TAHAE+ AIR
Sbjct: 1   MTKEEL-MRKAIALSIENVKRDGGPFGAVIAKDGEIVATGVNRVTDSCDPTAHAEVSAIR 59

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116
                L    L   ++Y + EPC MC  AI  AR+ +LY+  +      I     F
Sbjct: 60  AAAEKLKTFDLSGYEIYSSCEPCPMCLGAIYWARLDKLYFANTKTDAKDIGFDDSF 115


>gi|312623117|ref|YP_004024730.1| riboflavin biosynthesis protein ribd [Caldicellulosiruptor
           kronotskyensis 2002]
 gi|312203584|gb|ADQ46911.1| riboflavin biosynthesis protein RibD [Caldicellulosiruptor
           kronotskyensis 2002]
          Length = 371

 Score =  139 bits (351), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 44/152 (28%), Positives = 67/152 (44%), Gaps = 18/152 (11%)

Query: 3   KGNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
             + +M+ ALE A+ A   +     VG V V N  +I +  ++    K    HAE+LAI 
Sbjct: 5   SHSYYMNMALELAKEASPLVLPNPRVGCVIVKNGTVIGKGYHQKYGEK----HAEVLAIE 60

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
               I +  +L    +YVTLEPC        C  AI  + I+R+     +P       G 
Sbjct: 61  DA--IKNGYLLKNSTMYVTLEPCCHYGKQLPCTEAIIKSGIKRVVIATKDPNPLVNGKGI 118

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
           Q        H  E+  G+ ++ +  I +DFFK
Sbjct: 119 QILKQ----HGTEVIEGVLQKEAESINKDFFK 146


>gi|296413803|ref|XP_002836598.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295630426|emb|CAZ80789.1| unnamed protein product [Tuber melanosporum]
          Length = 179

 Score =  139 bits (351), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 43/111 (38%), Positives = 60/111 (54%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  AL+ A +A   NE+PVG V V  ++II+   N        T HAE++AI        
Sbjct: 1   MQSALQIATSALQSNEVPVGCVFVHGSRIIASGRNDTNRSLCGTRHAELVAIDKILATHP 60

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
             I  E DLYVT+EPC MCA+A+    IR++Y+G SN + GG     + + 
Sbjct: 61  PSIFKETDLYVTVEPCIMCASALRQIGIRKVYFGCSNDRFGGCGGVLRVHE 111


>gi|251780701|ref|ZP_04823621.1| guanine deaminase [Clostridium botulinum E1 str. 'BoNT E Beluga']
 gi|243085016|gb|EES50906.1| guanine deaminase [Clostridium botulinum E1 str. 'BoNT E Beluga']
          Length = 157

 Score =  139 bits (351), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 40/113 (35%), Positives = 57/113 (50%), Gaps = 2/113 (1%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEI-PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
           M++  + M   +++ +   L  E  P GA  V + KII+ A N   +  D TAH E+ AI
Sbjct: 1   MQQKEI-MDLCVKQCKEGMLNLEGGPFGAAIVKDGKIIALANNTVIKDNDPTAHGEMNAI 59

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN 112
           R  C  LS   L   +LY T EPC MC +AI  + I ++YYG +      I  
Sbjct: 60  RQACNKLSTFDLSGCELYTTSEPCPMCMSAIIWSNISKVYYGCTVKDAADIGF 112


>gi|308497160|ref|XP_003110767.1| hypothetical protein CRE_04875 [Caenorhabditis remanei]
 gi|308242647|gb|EFO86599.1| hypothetical protein CRE_04875 [Caenorhabditis remanei]
          Length = 168

 Score =  139 bits (351), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 35/118 (29%), Positives = 49/118 (41%), Gaps = 2/118 (1%)

Query: 4   GNVFMSCALEEAQNAALRNEI-PVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRM 61
               M  A+ EA       +  P GAV V     ++++  N      D T HAE+ AIR 
Sbjct: 14  HKELMEEAVAEACRGVECGDGGPFGAVIVDKKGNVVAKGHNMVIVTNDPTMHAEMTAIRN 73

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
            C+ L    L    LY +  PC MC  A   AR   +YYGA+  +   I    + +  
Sbjct: 74  ACKALGTFDLSGHTLYTSCYPCPMCMGASLWARFDAIYYGATAQQAAEIGFDDKAFHD 131


>gi|189425440|ref|YP_001952617.1| CMP/dCMP deaminase zinc-binding [Geobacter lovleyi SZ]
 gi|189421699|gb|ACD96097.1| CMP/dCMP deaminase zinc-binding [Geobacter lovleyi SZ]
          Length = 145

 Score =  139 bits (351), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 43/144 (29%), Positives = 66/144 (45%), Gaps = 10/144 (6%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           + FM  A+EEA+       IP+G+V V NN+II R  NR  +      H E+ A+    R
Sbjct: 2   DSFMQAAIEEAEAGLAEGGIPIGSVIVHNNRIIGRGHNRRVQQGSAILHGEMDALERAGR 61

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
             +  +  E  LY TL PC MC+ AI L  I R+  G +    G  E             
Sbjct: 62  QPAS-VYREAVLYTTLSPCPMCSGAILLYGIPRVVIGENRTFLGEEE----LLRSRGV-- 114

Query: 125 SPEIYPGISEQRSRQIIQDFFKER 148
             E+   + ++R  ++++ F  E+
Sbjct: 115 QLEV---LQDERCIRLMEQFIAEK 135


>gi|197117867|ref|YP_002138294.1| zinc-dependent cytosine deaminase [Geobacter bemidjiensis Bem]
 gi|197087227|gb|ACH38498.1| zinc-dependent cytosine deaminase [Geobacter bemidjiensis Bem]
          Length = 145

 Score =  139 bits (351), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 39/145 (26%), Positives = 66/145 (45%), Gaps = 12/145 (8%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           +++M  A+EEA+       IP+G+V V    I+ R  NR  +      H E+ A+    R
Sbjct: 2   DIYMQSAIEEAKKGLGEGGIPIGSVLVHKGLILGRGHNRRVQKGSSILHGEMDALENAGR 61

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
            L  ++  E  LY TL PC+MC+ AI L  I R+  G ++   G  E            H
Sbjct: 62  -LPAQVYRESVLYTTLSPCSMCSGAILLYGIPRVVIGENSTFTGEEELLRS--------H 112

Query: 125 SPEIYPGISEQ-RSRQIIQDFFKER 148
             ++   + +      +++ F +E+
Sbjct: 113 GVQV--DVLQDQECISLMRTFIEEK 135


>gi|89070783|ref|ZP_01158036.1| cytidine and deoxycytidylate deaminase family protein [Oceanicola
           granulosus HTCC2516]
 gi|89043625|gb|EAR49832.1| cytidine and deoxycytidylate deaminase family protein [Oceanicola
           granulosus HTCC2516]
          Length = 149

 Score =  138 bits (350), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 62/111 (55%), Positives = 75/111 (67%)

Query: 39  RAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98
           RAGNR REL D TAHAE+LAIR  C     + LP  DLYVTLEPC MCAAAI  ARI RL
Sbjct: 39  RAGNRTRELADPTAHAELLAIRAACAAAGSDRLPGHDLYVTLEPCPMCAAAIGFARIARL 98

Query: 99  YYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
           YYGA++PK GG+ +G +       HH PEIY GI+   +  +++DFF + R
Sbjct: 99  YYGAADPKSGGVAHGPRVLAHPQSHHRPEIYDGIAAGPAAALLRDFFADLR 149


>gi|242280630|ref|YP_002992759.1| CMP/dCMP deaminase zinc-binding [Desulfovibrio salexigens DSM 2638]
 gi|242123524|gb|ACS81220.1| CMP/dCMP deaminase zinc-binding [Desulfovibrio salexigens DSM 2638]
          Length = 145

 Score =  138 bits (350), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 36/128 (28%), Positives = 53/128 (41%), Gaps = 10/128 (7%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M     FM  A + A+ +  +  +P+G+V V + KII    N+  +  D  AH E+  IR
Sbjct: 1   MSDME-FMEEAYKLAKKSFDQGGLPIGSVLVRDGKIIGSGHNQRVQKGDPIAHGEMDCIR 59

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENG------T 114
              R   Q+   +  +Y TL PC MC+  I    I R+  G +   GG  E         
Sbjct: 60  NAGR---QKTYKDTTIYTTLSPCMMCSGTIVQFGISRVVIGENRNFGGNEEFLESRGVQV 116

Query: 115 QFYTLATC 122
                  C
Sbjct: 117 DILDHPKC 124


>gi|220919906|ref|YP_002495209.1| CMP/dCMP deaminase zinc-binding [Methylobacterium nodulans ORS
           2060]
 gi|219952326|gb|ACL62717.1| CMP/dCMP deaminase zinc-binding [Methylobacterium nodulans ORS
           2060]
          Length = 160

 Score =  138 bits (350), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 36/111 (32%), Positives = 52/111 (46%), Gaps = 5/111 (4%)

Query: 1   MKKGNV-FMSCALEEAQN---AALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56
           M   +  FM+ A+E ++          +  G V V + +I++   NR     D T H EI
Sbjct: 1   MTDDDKKFMARAIELSEKTSLVESAGGV-FGCVIVQDGEILAEGANRVVAENDPTWHGEI 59

Query: 57  LAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKG 107
            AIR  C+      L +  LY + EPC MC AA   A I+ +YY A+N   
Sbjct: 60  EAIRKACKAQGSFKLRDATLYTSAEPCPMCMAAAYWAGIKAIYYAATNEDA 110


>gi|148266168|ref|YP_001232874.1| CMP/dCMP deaminase, zinc-binding [Geobacter uraniireducens Rf4]
 gi|146399668|gb|ABQ28301.1| CMP/dCMP deaminase, zinc-binding protein [Geobacter uraniireducens
           Rf4]
          Length = 160

 Score =  138 bits (350), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 42/141 (29%), Positives = 59/141 (41%), Gaps = 12/141 (8%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           + FM  AL EA+       IP+G+V V N +II R  NR  +      H E+ A+    R
Sbjct: 17  DTFMQAALAEAKQGQAEGGIPIGSVIVHNGRIIGRGHNRRVQKGSAILHGEMDALENAGR 76

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
             +  +  E  LY TL PC MC+ AI L  I R+  G +    G  E             
Sbjct: 77  QTAA-VYRECTLYTTLSPCAMCSGAILLYGIPRVIVGENRTFLGEEE----LLKSRG--- 128

Query: 125 SPEIYPGIS-EQRSRQIIQDF 144
              +   +  EQ    ++ DF
Sbjct: 129 ---VTVDVLQEQECISMMTDF 146


>gi|256423014|ref|YP_003123667.1| CMP/dCMP deaminase zinc-binding [Chitinophaga pinensis DSM 2588]
 gi|256037922|gb|ACU61466.1| CMP/dCMP deaminase zinc-binding [Chitinophaga pinensis DSM 2588]
          Length = 159

 Score =  138 bits (350), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 33/101 (32%), Positives = 56/101 (55%), Gaps = 1/101 (0%)

Query: 2   KKGNVFMSCALEEAQNAALRNEI-PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           ++   FM  A++ ++    + +  P GA+ V   +I+ R  N+     D TAHAE++AIR
Sbjct: 4   EREKRFMQMAVDLSREGMEKGDGGPFGAIVVRGEEIVGRGWNQVLSFNDPTAHAEVVAIR 63

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
             C  L+   L + +++ + EPC MC  AI  AR +R+Y+ 
Sbjct: 64  DACANLNTFQLHDCEIFTSCEPCPMCLGAIYWARPQRVYFA 104


>gi|218245366|ref|YP_002370737.1| CMP/dCMP deaminase [Cyanothece sp. PCC 8801]
 gi|257058401|ref|YP_003136289.1| CMP/dCMP deaminase zinc-binding [Cyanothece sp. PCC 8802]
 gi|218165844|gb|ACK64581.1| CMP/dCMP deaminase zinc-binding [Cyanothece sp. PCC 8801]
 gi|256588567|gb|ACU99453.1| CMP/dCMP deaminase zinc-binding [Cyanothece sp. PCC 8802]
          Length = 139

 Score =  138 bits (350), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 39/140 (27%), Positives = 64/140 (45%), Gaps = 12/140 (8%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  A+ EA+       IP+G+V V  ++II +  N+  +  D   HAEI  +R   RI  
Sbjct: 1   MKAAIAEAKQGLQEGGIPIGSVLVKGDQIIGKGHNKRVQDGDPVTHAEIDCLRNAGRIG- 59

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
                +  LY TL PC +CA A+    I+++  G S    G  E            H  E
Sbjct: 60  --NYQDTVLYSTLMPCYLCAGAVVQFGIKKVIAGESQTFPGAREFMES--------HGVE 109

Query: 128 IYPGISEQRSRQIIQDFFKE 147
           +   ++    +Q++Q+F ++
Sbjct: 110 VID-LNLGECQQLMQEFIEK 128


>gi|326492115|dbj|BAJ98282.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 186

 Score =  138 bits (350), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 42/112 (37%), Positives = 59/112 (52%), Gaps = 1/112 (0%)

Query: 2   KKGNVFMSCALEEAQNAALRN-EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
            + + F+S A+EEA          P GAV V N+++I    N      D TAHAE+ AIR
Sbjct: 29  DRDHKFLSKAVEEAYKGVDCGHGGPFGAVVVRNDEVIVGCHNMVLNNTDPTAHAEVTAIR 88

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN 112
             C+ L +  L + ++Y + EPC MC  A+ L+RI+RL YGA       I  
Sbjct: 89  EACKKLGKIELSDCEMYASCEPCPMCFGAVHLSRIKRLVYGAKAEAAIAIGF 140


>gi|194398441|ref|YP_002036741.1| cytosine/adenosine deaminase [Streptococcus pneumoniae G54]
 gi|194358108|gb|ACF56556.1| Cytosine/adenosine deaminase [Streptococcus pneumoniae G54]
          Length = 106

 Score =  138 bits (350), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 41/97 (42%), Positives = 56/97 (57%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +++  VFM  AL EA+ A   +EIP+G V V + +II R  N   EL+    HAEI+AI 
Sbjct: 5   LEEKEVFMREALREAEIALEHDEIPIGCVIVKDGEIIGRGHNAREELQRAVMHAEIMAIE 64

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRR 97
                     L +  L+VT+EPC MC+ AI LARI +
Sbjct: 65  DANLSEESWRLLDCTLFVTIEPCVMCSGAIGLARIPK 101


>gi|118586582|ref|ZP_01544023.1| cytidine/deoxycytidylate deaminase [Oenococcus oeni ATCC BAA-1163]
 gi|118432961|gb|EAV39686.1| cytidine/deoxycytidylate deaminase [Oenococcus oeni ATCC BAA-1163]
          Length = 157

 Score =  138 bits (350), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 39/116 (33%), Positives = 57/116 (49%), Gaps = 3/116 (2%)

Query: 3   KGNVFMSCALEEAQN--AALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
             +V+M  A+E+A           P GAV V + ++I  A N      D TAHAEI+AIR
Sbjct: 2   TDSVYMKLAIEQANENIVLKEGG-PFGAVIVRDQEVICAAHNMVLANLDPTAHAEIIAIR 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116
             C++L+   L +  LY +  PC MC +A   A I+ + YG +  +   I     F
Sbjct: 61  KACKVLATRDLSDCTLYTSAYPCPMCLSATIWANIKEVRYGNTPKEADRIGFRDDF 116


>gi|225451245|ref|XP_002276494.1| PREDICTED: hypothetical protein [Vitis vinifera]
 gi|298204906|emb|CBI34213.3| unnamed protein product [Vitis vinifera]
          Length = 186

 Score =  138 bits (349), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 42/112 (37%), Positives = 60/112 (53%), Gaps = 1/112 (0%)

Query: 2   KKGNVFMSCALEEAQNAALRNEI-PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
            +   F++ A+EEA       +  P GAV V N++++    N      D TAHAE+ AIR
Sbjct: 29  DRDYKFLTAAVEEAYKGVECGDGGPFGAVVVHNDEVLVSCHNMVLTNTDPTAHAEVTAIR 88

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN 112
             C+ L+Q  L + ++Y + EPC MC  AI L+RI+RL YGA       I  
Sbjct: 89  EACKKLNQIELSDCEIYASCEPCPMCFGAIHLSRIKRLVYGAKAEAAIAIGF 140


>gi|255630329|gb|ACU15521.1| unknown [Glycine max]
          Length = 186

 Score =  138 bits (349), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 42/112 (37%), Positives = 60/112 (53%), Gaps = 1/112 (0%)

Query: 2   KKGNVFMSCALEEAQNAAL-RNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
            + + F+  A+EEA      ++  P G V V N++I++   N      D TAHAE+ AIR
Sbjct: 29  DRDHKFLRKAVEEAYKGVDCKDGGPFGVVIVHNDEIVASCHNMVLCNTDPTAHAEVTAIR 88

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN 112
             C+ L Q  L + ++Y + EPC MC  AI L+RI+RL YGA       I  
Sbjct: 89  EACKKLKQIELADCEIYASCEPCPMCFGAIHLSRIKRLVYGAKAEAAIAIGF 140


>gi|187935669|ref|YP_001884839.1| cytidine/deoxycytidylate deaminase family protein [Clostridium
           botulinum B str. Eklund 17B]
 gi|187723822|gb|ACD25043.1| guanine deaminase [Clostridium botulinum B str. Eklund 17B]
          Length = 157

 Score =  138 bits (349), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 42/131 (32%), Positives = 60/131 (45%), Gaps = 6/131 (4%)

Query: 1   MKKGNVFMSCALEEAQNAALR-NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
           M+K ++ M   +E+ +   L  +  P GA  V + +II+ A N      D TAH E+ AI
Sbjct: 1   MQKKDI-MDLCVEKCKEGMLNLDGGPFGAAIVKDGEIIALANNTVISTNDPTAHGEVNAI 59

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIE----NGTQ 115
           R  C  LS   L   +LY T EPC MC +AI  A I ++YYG +      I     +   
Sbjct: 60  RQACSKLSTFDLTGCELYTTSEPCPMCMSAIIWANISKVYYGCTVKDAADIGFRDEHILN 119

Query: 116 FYTLATCHHSP 126
           F      +   
Sbjct: 120 FLKGDCTNKKV 130


>gi|227355507|ref|ZP_03839902.1| guanine deaminase [Proteus mirabilis ATCC 29906]
 gi|227164303|gb|EEI49192.1| guanine deaminase [Proteus mirabilis ATCC 29906]
          Length = 153

 Score =  138 bits (349), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 35/105 (33%), Positives = 55/105 (52%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
               F+  A+  A         P GAV V N ++I+ A N+     D TAHAE+LA+R  
Sbjct: 2   SDKQFIQQAISLATENVKVGGRPFGAVIVKNGQVIAHAVNQITATNDPTAHAELLALREA 61

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKG 107
            ++L +  L +  +Y + +PC MC AA+ +A I +++Y  SN   
Sbjct: 62  GKVLGRAKLDDCVVYASGQPCPMCLAAMRMAGISQIFYAYSNDDA 106


>gi|298490596|ref|YP_003720773.1| CMP/dCMP deaminase zinc-binding protein ['Nostoc azollae' 0708]
 gi|298232514|gb|ADI63650.1| CMP/dCMP deaminase zinc-binding protein ['Nostoc azollae' 0708]
          Length = 143

 Score =  138 bits (349), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 39/141 (27%), Positives = 63/141 (44%), Gaps = 12/141 (8%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  A+ EA+       IP+G+V V N KI+ +  N+  +  D   HAEI  +R   R+  
Sbjct: 5   MQAAISEAKQGRDEGGIPIGSVLVRNGKILGKGHNKRVQDGDPVTHAEIDCLRNAGRLG- 63

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
                 + LY TL PC +CA A+    I+++  G S    G  E            H  E
Sbjct: 64  --NYKGITLYSTLMPCYLCAGAVVQFGIKKVIAGESRTFPGAKEFMVS--------HGVE 113

Query: 128 IYPGISEQRSRQIIQDFFKER 148
           +   ++    +Q++ +F  E+
Sbjct: 114 VID-LNLDECKQMMNEFITEK 133


>gi|209886320|ref|YP_002290177.1| cytidine/deoxycytidylate deaminase family protein [Oligotropha
           carboxidovorans OM5]
 gi|209874516|gb|ACI94312.1| cytidine/deoxycytidylate deaminase family protein [Oligotropha
           carboxidovorans OM5]
          Length = 154

 Score =  138 bits (349), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 40/107 (37%), Positives = 52/107 (48%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M     F+  A+E A+N       P GAV V + K+I+   N      D T HAE+ AIR
Sbjct: 1   MSDTERFLCEAIELARNNVRNGGRPFGAVLVKDGKVIATGVNEIGATGDPTTHAELQAIR 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKG 107
              R+L    L    +Y +  PC MC AA+ L  IR L Y  SN +G
Sbjct: 61  AASRVLGTPRLDGCIVYASGHPCPMCLAAMHLTGIRELAYAYSNDEG 107


>gi|70990810|ref|XP_750254.1| cytosine deaminase [Aspergillus fumigatus Af293]
 gi|119496775|ref|XP_001265161.1| cytosine deaminase, putative [Neosartorya fischeri NRRL 181]
 gi|66847886|gb|EAL88216.1| cytosine deaminase, putative [Aspergillus fumigatus Af293]
 gi|119413323|gb|EAW23264.1| cytosine deaminase, putative [Neosartorya fischeri NRRL 181]
 gi|159130729|gb|EDP55842.1| cytosine deaminase, putative [Aspergillus fumigatus A1163]
          Length = 148

 Score =  138 bits (349), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 41/150 (27%), Positives = 69/150 (46%), Gaps = 14/150 (9%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAI 59
           M+    F+  ALEEA+  A    +P+GA  V  + KI+ R  N   +    T HAE+ A+
Sbjct: 1   METDAGFI-AALEEAKKGAAEGGVPIGAALVSKDGKILGRGHNMRVQKGSATLHAEMSAL 59

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
               R+ +        +Y TL PC MC  A  L +++R+  G +    GG E        
Sbjct: 60  ENSGRLPASAY-EGATMYTTLSPCDMCTGACILYKVKRVVIGENKNFMGGEEYL------ 112

Query: 120 ATCHHSPEIYPGISE-QRSRQIIQDFFKER 148
              +   E+   + + +  +Q+++ F KE+
Sbjct: 113 --LNRGKEVV--VLDNEECKQLMEKFIKEK 138


>gi|305664674|ref|YP_003860961.1| putative cytosine/adenosine deaminase [Maribacter sp. HTCC2170]
 gi|88707375|gb|EAQ99621.1| putative cytosine/adenosine deaminase [Maribacter sp. HTCC2170]
          Length = 154

 Score =  138 bits (349), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 37/143 (25%), Positives = 61/143 (42%), Gaps = 5/143 (3%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M   + +M+  ++ A+ A      PVGA+ V  ++I+       R  KD+T HAEI AI+
Sbjct: 10  MVNHDFYMAKCIQLAEEAKQNGNTPVGALIVSKDEILGIGRENTRSKKDITRHAEIEAIQ 69

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT-- 118
              + +    L    LY T EPC MC+  I    I  + +G  +   GG  +        
Sbjct: 70  NALKKVKS--LKGAILYTTHEPCVMCSYVIRHYEIGTVVFGLRSKYIGGKSSEFNLLETE 127

Query: 119 -LATCHHSPEIYPGISEQRSRQI 140
            +      P    G+  +  +Q+
Sbjct: 128 NIPIWSQPPSFIEGVLVKECQQL 150


>gi|126641614|ref|YP_001084598.1| putative deaminase [Acinetobacter baumannii ATCC 17978]
          Length = 135

 Score =  138 bits (349), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 44/114 (38%), Positives = 57/114 (50%), Gaps = 1/114 (0%)

Query: 33  NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILP-EVDLYVTLEPCTMCAAAIS 91
            NK+I    N    L D TAHAEI AIR  C  L    LP +  LYVTLEPCTMC  A+ 
Sbjct: 3   QNKLIGAGFNAPIGLSDPTAHAEIQAIRAACESLKNYRLPEDATLYVTLEPCTMCVGALV 62

Query: 92  LARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
            ARI+ + +G + PK G + +  Q       +H      G   ++  Q +  FF
Sbjct: 63  HARIKHVVFGTTEPKAGSLVSARQLLENGYYNHKFTFEHGCLHEKCAQQLSLFF 116


>gi|261855466|ref|YP_003262749.1| Guanine deaminase [Halothiobacillus neapolitanus c2]
 gi|261835935|gb|ACX95702.1| Guanine deaminase [Halothiobacillus neapolitanus c2]
          Length = 163

 Score =  138 bits (349), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 38/117 (32%), Positives = 58/117 (49%), Gaps = 1/117 (0%)

Query: 2   KKGNVFMSCALEEAQNAALRN-EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           ++    M  A+E ++   +     P GAV   N ++I+   N+     D TAHAE+ AIR
Sbjct: 8   EQEKQIMRQAIEFSREKMIAGFGGPFGAVISRNGEVIATGFNQVTSANDPTAHAEVSAIR 67

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFY 117
             C++L+   L   ++Y + EPC MC +AI  AR+ R+YY  S      I     F 
Sbjct: 68  AACQVLNTFDLSGCEIYTSCEPCPMCLSAIYWARLDRIYYANSRQDAADIGFDDAFL 124


>gi|255626047|gb|ACU13368.1| unknown [Glycine max]
          Length = 170

 Score =  138 bits (348), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 45/112 (40%), Positives = 62/112 (55%), Gaps = 1/112 (0%)

Query: 2   KKGNVFMSCALEEAQNAALRN-EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
            + N F++ A+EEA  A       P GAV V N++I+S   N      D TAHAEI AIR
Sbjct: 13  DRENKFLTMAIEEAYKAVESGHGRPFGAVIVRNDEILSSCHNMVVRNADPTAHAEITAIR 72

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN 112
             CR L+Q  L + ++Y + EPC MC +AI  ++I++L YGA       I  
Sbjct: 73  EACRKLNQVELADSEIYASCEPCPMCLSAIHFSKIKKLVYGAKAEAAVAIGF 124


>gi|295442884|ref|NP_596505.2| tRNA specific adenosine deaminase subunit Tad2 (predicted)
           [Schizosaccharomyces pombe 972h-]
 gi|259016150|sp|O94642|TAD2_SCHPO RecName: Full=tRNA-specific adenosine deaminase subunit tad2;
           AltName: Full=tRNA-specific adenosine-34 deaminase
           subunit tad2
 gi|254745608|emb|CAB38514.2| tRNA specific adenosine deaminase subunit Tad2 (predicted)
           [Schizosaccharomyces pombe]
          Length = 389

 Score =  138 bits (348), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 38/151 (25%), Positives = 61/151 (40%), Gaps = 11/151 (7%)

Query: 2   KKGNVFMSCALEEAQNAALRNEI-------PVGAVAVLNNKIISRAGNRNRELKDVTAHA 54
            +   +M  A E                  P   V V   ++I R  N          HA
Sbjct: 212 TQHETYMKLAHEI----LNLGPYFVIQPRSPGSCVFVYKGEVIGRGFNETNCSLSGIRHA 267

Query: 55  EILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           E++AI          +  E  LYVT+EPC MCAAA+    I+ +Y+G  N + GG  +  
Sbjct: 268 ELIAIEKILEHYPASVFKETTLYVTVEPCLMCAAALKQLHIKAVYFGCGNDRFGGCGSVF 327

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
                 +   S  +YPG+    +  ++++F+
Sbjct: 328 SINKDQSIDPSYPVYPGLFYSEAVMLMREFY 358


>gi|45358432|ref|NP_987989.1| cytidine/deoxycytidylate deaminase [Methanococcus maripaludis S2]
 gi|44921190|emb|CAF30425.1| Cytidine/deoxycytidylate deaminase, zinc-binding region related
           protein [Methanococcus maripaludis S2]
          Length = 141

 Score =  138 bits (348), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 39/140 (27%), Positives = 69/140 (49%), Gaps = 10/140 (7%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  A++EA  +     IP+GAV V  NKII R  NR  +      HAE+ A+    R L+
Sbjct: 1   MDEAVKEANLSLKEGGIPIGAVLVYENKIIGRGHNRRVQNNSAILHAEMDALENAGR-LT 59

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
            ++    +LY TL PC MC+ A+ L +I+++  G +    G                + E
Sbjct: 60  SDVYKNCELYTTLSPCIMCSGAVLLYKIKKVVIGENKTFLGA----EDLLIKNGV--AVE 113

Query: 128 IYPGISEQRSRQIIQDFFKE 147
           +   ++++R  +++++F + 
Sbjct: 114 V---LNDERCVKMMKEFIEN 130


>gi|312885336|ref|ZP_07745000.1| CMP/dCMP deaminase zinc-binding [Mucilaginibacter paludis DSM
           18603]
 gi|311302187|gb|EFQ79192.1| CMP/dCMP deaminase zinc-binding [Mucilaginibacter paludis DSM
           18603]
          Length = 148

 Score =  138 bits (348), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 38/108 (35%), Positives = 54/108 (50%), Gaps = 1/108 (0%)

Query: 10  CALEEAQNAALRN-EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQ 68
            A+E +++   +    P GAV V +  +I+R+ NR     D TAHAE+ AIR+ C+ L  
Sbjct: 1   MAIELSEHNVQQGQGGPFGAVIVKDGMVIARSANRVVPQNDPTAHAEVSAIRLACQELQS 60

Query: 69  EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116
             L    +Y + EPC MC  AI  ARI  +YY         I    +F
Sbjct: 61  FSLEGCVIYTSCEPCPMCLGAIYWARINEIYYANDKADAAAIGFDDKF 108


>gi|227541098|ref|ZP_03971147.1| tRNA-specific adenosine deaminase [Corynebacterium glucuronolyticum
           ATCC 51866]
 gi|227183114|gb|EEI64086.1| tRNA-specific adenosine deaminase [Corynebacterium glucuronolyticum
           ATCC 51866]
          Length = 161

 Score =  138 bits (348), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 44/128 (34%), Positives = 61/128 (47%), Gaps = 1/128 (0%)

Query: 23  EIPVGA-VAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81
           ++PV A V      +I    N  +   D TAHAE+ AIRM  R     IL   +L VTLE
Sbjct: 28  DVPVAAAVFDAEGTMIGWGTNERKATSDPTAHAEVQAIRMAARARRDYILENTELVVTLE 87

Query: 82  PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141
           PCTMCA A   ARI  L +GA   K G + +           +  E+  G+        +
Sbjct: 88  PCTMCAGAFLAARIPSLVFGAFEEKTGAVGSVIDVVREPALPNRVEVVGGVLADECAAPL 147

Query: 142 QDFFKERR 149
           + FF+++R
Sbjct: 148 RAFFRDKR 155


>gi|268574528|ref|XP_002642242.1| Hypothetical protein CBG18226 [Caenorhabditis briggsae]
 gi|187025244|emb|CAP35711.1| hypothetical protein CBG_18226 [Caenorhabditis briggsae AF16]
          Length = 168

 Score =  138 bits (348), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 37/119 (31%), Positives = 52/119 (43%), Gaps = 2/119 (1%)

Query: 3   KGNVFMSCALEEAQNAALRNEI-PVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIR 60
                M+ A+ EA       +  P GAV V N   ++++  N     KD T HAE+ AIR
Sbjct: 13  NHKELMAEAVAEACRGVECGDGGPFGAVIVDNKGNVVAKGHNMVLVTKDPTMHAEMTAIR 72

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
             C+ L    L    LY +  PC MC  A   AR   +YYGA+  +   I    + +  
Sbjct: 73  NACKTLGTFDLSGHTLYTSCYPCPMCMGASLWARFDAIYYGATAQQAAEIGFDDKAFHD 131


>gi|83815475|ref|YP_446616.1| putative cytidine and deoxycytidylate deaminase [Salinibacter ruber
           DSM 13855]
 gi|83756869|gb|ABC44982.1| putative cytidine and deoxycytidylate deaminase [Salinibacter ruber
           DSM 13855]
          Length = 221

 Score =  138 bits (348), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 43/145 (29%), Positives = 60/145 (41%), Gaps = 8/145 (5%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRM 61
               F+  A++EA +A      P GAV V     ++ RAGN      D T HAE   +R 
Sbjct: 72  DHERFVRAAIDEAGSAQDAGNPPFGAVLVGPGGTVLDRAGNTEGRTGDCTGHAETNLVRA 131

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKG----GGIENGTQF- 116
             +    E L +  LY + EPC MCA AI  ARI R+ +G    +     G         
Sbjct: 132 ASQEYDPERLAKATLYASTEPCAMCAGAIFWARIGRVVFGLRAERLYDMKGDAGRQLALS 191

Query: 117 --YTLATCHHSPEIYPGISEQRSRQ 139
               LA  +H  E+   + E  +  
Sbjct: 192 CEDVLARGNHEVEVVGPVLEDEAAA 216


>gi|302873177|ref|YP_003841810.1| CMP/dCMP deaminase zinc-binding [Clostridium cellulovorans 743B]
 gi|307688659|ref|ZP_07631105.1| CMP/dCMP deaminase zinc-binding protein [Clostridium cellulovorans
           743B]
 gi|302576034|gb|ADL50046.1| CMP/dCMP deaminase zinc-binding [Clostridium cellulovorans 743B]
          Length = 169

 Score =  137 bits (347), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 40/114 (35%), Positives = 56/114 (49%), Gaps = 6/114 (5%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRM 61
               +++ A EEA  A      P+GAV V +   I+S+  NR     D TAHAE+ AIR 
Sbjct: 4   SDYDYLALAFEEANQAFEEGTYPIGAVIVDDDGNIVSKGRNRVFTESDCTAHAEVDAIRK 63

Query: 62  GCRIL---SQEIL--PEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI 110
               L     +      + LY T EPC MC   I L+ I+R+ + A + + GGI
Sbjct: 64  AGHKLLDIPNKRFVKNNLTLYTTCEPCPMCTCTILLSGIKRVVWAADDDEYGGI 117


>gi|239832713|ref|ZP_04681042.1| CMP/dCMP deaminase zinc-binding [Ochrobactrum intermedium LMG 3301]
 gi|239824980|gb|EEQ96548.1| CMP/dCMP deaminase zinc-binding [Ochrobactrum intermedium LMG 3301]
          Length = 156

 Score =  137 bits (347), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 33/107 (30%), Positives = 56/107 (52%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M     F+  A++ A +   +   P GAV V   ++I+   NR +   D TAHAE+LA+R
Sbjct: 1   MSSDGTFLDQAIKLAFDNIEQGGRPFGAVVVKGGEVIATGVNRMQADCDPTAHAELLALR 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKG 107
              + L    L   ++Y + +PC MC AA+ +A + ++ +  SN + 
Sbjct: 61  AAGKALRSPRLDGCEVYASGQPCPMCFAAMRMAGVEKIRFAYSNEQA 107


>gi|226324154|ref|ZP_03799672.1| hypothetical protein COPCOM_01932 [Coprococcus comes ATCC 27758]
 gi|225207703|gb|EEG90057.1| hypothetical protein COPCOM_01932 [Coprococcus comes ATCC 27758]
          Length = 153

 Score =  137 bits (347), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 34/90 (37%), Positives = 48/90 (53%)

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
           +   +++    L E  LYVTLEPC MC+ AI  ARI R+  G  NPK G   +      +
Sbjct: 8   KKASKVMGDWRLEECTLYVTLEPCQMCSGAIVQARIPRVVVGCMNPKAGCAGSILNLLQV 67

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
              +H  E+  GI E+   Q+++ FFKE R
Sbjct: 68  EAFNHQAELTTGILEEECSQMMKSFFKELR 97


>gi|114609581|ref|XP_001172262.1| PREDICTED: hypothetical protein LOC463037 isoform 1 [Pan
           troglodytes]
 gi|31874632|emb|CAD98054.1| hypothetical protein [Homo sapiens]
 gi|119568253|gb|EAW47868.1| deaminase domain containing 1, isoform CRA_b [Homo sapiens]
 gi|193785142|dbj|BAG54295.1| unnamed protein product [Homo sapiens]
          Length = 144

 Score =  137 bits (347), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 36/125 (28%), Positives = 60/125 (48%), Gaps = 8/125 (6%)

Query: 31  VLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL------SQEILPEVDLYVTLEPCT 84
           V NN+++ +  N   + K+ T HAE++AI               E+     LYVT+EPC 
Sbjct: 2   VYNNEVVGKGRNEVNQTKNATRHAEMVAIDQVLDWCRQSGKSPSEVFEHTVLYVTVEPCI 61

Query: 85  MCAAAISLARIRRLYYGASNPKGGGIENGTQF--YTLATCHHSPEIYPGISEQRSRQIIQ 142
           MCAAA+ L +I  + YG  N + GG  +        L       +  PG   + + ++++
Sbjct: 62  MCAAALRLMKIPLVVYGCQNERFGGCGSVLNIASADLPNTGRPFQCIPGYRAEEAVEMLK 121

Query: 143 DFFKE 147
            F+K+
Sbjct: 122 TFYKQ 126


>gi|83814096|ref|YP_445447.1| cytidine deaminase [Salinibacter ruber DSM 13855]
 gi|83755490|gb|ABC43603.1| probable cytidine deaminase [Salinibacter ruber DSM 13855]
          Length = 237

 Score =  137 bits (347), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 39/122 (31%), Positives = 49/122 (40%), Gaps = 1/122 (0%)

Query: 7   FMSCALEEAQNAALRN-EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           F+  A+E A          P  A+ V + +I+ R  N    L D TAHAE+ AIR  C  
Sbjct: 87  FLREAIEMAVQNVTTGQGGPFAALVVRDGEIVGRGTNVVTTLNDPTAHAEVTAIRRACDA 146

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           L    L    LY T EPC MC  A   AR+ R+YY A+                      
Sbjct: 147 LDDFELAGCTLYATCEPCPMCLGAAYWARLDRVYYAATQEDAAEAGFDDHHIYEEMAKPP 206

Query: 126 PE 127
            E
Sbjct: 207 TE 208


>gi|170585310|ref|XP_001897427.1| tRNA-specific adenosine deaminase 2 [Brugia malayi]
 gi|158595106|gb|EDP33679.1| tRNA-specific adenosine deaminase 2, putative [Brugia malayi]
          Length = 192

 Score =  137 bits (347), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 45/152 (29%), Positives = 83/152 (54%), Gaps = 7/152 (4%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           K+   F++ A E A +A   NE+PVG V V   + ++   N     K+ T HAE++A+ M
Sbjct: 9   KEEVHFLNRAFEIAVDAVANNEVPVGCVFVFEGQEVAFGRNDVNRSKNPTYHAEMVALEM 68

Query: 62  GCRILSQ------EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
             +  +       +++    LYVTLEPC MCA+A+    ++++ YGA+N + GG+ +   
Sbjct: 69  MKQWCTDNGRELEDVMRCTTLYVTLEPCIMCASALYHLHLKKILYGAANERFGGLLSVGT 128

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
                   H  EI P ++  R+ +++++F+++
Sbjct: 129 R-EKYGAKHFIEIMPNLNVSRAVKLLKEFYEK 159


>gi|145347025|ref|XP_001417980.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144578208|gb|ABO96273.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 173

 Score =  137 bits (347), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 39/150 (26%), Positives = 64/150 (42%), Gaps = 12/150 (8%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  AL +A+ A    E+P G     + +I++   N     ++ T HAE  A+        
Sbjct: 1   MRVALAQARLALDEWEVPCGCALARDGEIVAVGRNATNRTRNGTRHAEFEAVDALLDAHG 60

Query: 68  QE----ILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT----- 118
            +       +V LYVT EPC MCA A+S   +R + YG +N K GG       +      
Sbjct: 61  GDRAACRFEDVTLYVTCEPCVMCAGAMSALGVREVVYGCANDKFGGAGTVLDAHARGCGA 120

Query: 119 ---LATCHHSPEIYPGISEQRSRQIIQDFF 145
                      +   G+ E+ + ++ Q+F+
Sbjct: 121 CGGAGGVGKPYDARGGLFEREAIEMFQEFY 150


>gi|159112692|ref|XP_001706574.1| Cytosine deaminase, putative [Giardia lamblia ATCC 50803]
 gi|157434672|gb|EDO78900.1| Cytosine deaminase, putative [Giardia lamblia ATCC 50803]
          Length = 169

 Score =  137 bits (346), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 42/142 (29%), Positives = 72/142 (50%), Gaps = 4/142 (2%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M    +EA  A    E+PVG   V +  +I++   N   + ++ T HAEI+A+    ++ 
Sbjct: 1   MEECFKEASLALAEREVPVGCAIVDSAGRILATGRNATNKTRNSTHHAEIMAL---AQLP 57

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
           S   L +  LYVT+EPC MCAAA+S+  +  + Y A N K GG  +            + 
Sbjct: 58  SGTDLSDCVLYVTIEPCIMCAAALSIVGLTNIIYFARNSKFGGCGSVLDVNNHTARPWTK 117

Query: 127 EIYPGISEQRSRQIIQDFFKER 148
                + ++R+  ++Q+FF+ +
Sbjct: 118 LNAKYVPDERAIHLLQEFFERK 139


>gi|294507332|ref|YP_003571390.1| cytidine deaminase [Salinibacter ruber M8]
 gi|294343661|emb|CBH24439.1| Probable cytidine deaminase [Salinibacter ruber M8]
          Length = 237

 Score =  137 bits (346), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 39/122 (31%), Positives = 49/122 (40%), Gaps = 1/122 (0%)

Query: 7   FMSCALEEAQNAALRN-EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           F+  A+E A          P  A+ V + +I+ R  N    L D TAHAE+ AIR  C  
Sbjct: 87  FLREAIEMAVQNVTTGQGGPFAALVVRDGEIVGRGTNVVTTLNDPTAHAEVTAIRRACDA 146

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           L    L    LY T EPC MC  A   AR+ R+YY A+                      
Sbjct: 147 LDDFELAGCTLYATCEPCPMCLGAAYWARLDRVYYAATQEDAAEAGFDDHHIYEEMAKPP 206

Query: 126 PE 127
            E
Sbjct: 207 TE 208


>gi|330942469|gb|EGH45066.1| cytosine deaminase [Pseudomonas syringae pv. pisi str. 1704B]
          Length = 145

 Score =  137 bits (346), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 42/145 (28%), Positives = 62/145 (42%), Gaps = 12/145 (8%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           + FM  AL+EAQ       IP+G+V V   KII R  NR  +    T H EI A+    R
Sbjct: 2   DAFMQAALDEAQLGLKEGGIPIGSVIVHGGKIIGRGHNRRVQEGSATKHGEIDALENAGR 61

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
             +  +  +  LY TL PC MC+ AI L  IR++  G +    G  E             
Sbjct: 62  QPAS-VYRDSVLYTTLSPCAMCSGAILLYGIRKVIIGENESFMGEEE----LLRSRG--- 113

Query: 125 SPEIYPGISEQ-RSRQIIQDFFKER 148
              +   + +      +++DF   +
Sbjct: 114 ---VQIDVLDNPECTHMMKDFIASK 135


>gi|330971095|gb|EGH71161.1| cytosine deaminase [Pseudomonas syringae pv. aceris str. M302273PT]
          Length = 145

 Score =  137 bits (346), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 41/144 (28%), Positives = 60/144 (41%), Gaps = 10/144 (6%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           + FM  A +EAQ       IP+G+V V   KII R  NR  +    T H E+ A+    R
Sbjct: 2   DAFMQAAFDEAQLGLKEGGIPIGSVIVHGGKIIGRGHNRRVQEGSATKHGEMDALENAGR 61

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
             +  +  +  LY TL PC MC+ AI L  IR++  G      G  E             
Sbjct: 62  QPAS-VYRDSVLYTTLSPCAMCSGAILLYGIRKVIIGEHESFMGEEE----LLRSRGV-- 114

Query: 125 SPEIYPGISEQRSRQIIQDFFKER 148
             E+   +       +++DF   +
Sbjct: 115 QIEV---LDNPECTHMMKDFIASK 135


>gi|71733993|ref|YP_273732.1| cytosine deaminase [Pseudomonas syringae pv. phaseolicola 1448A]
 gi|257486822|ref|ZP_05640863.1| cytosine deaminase [Pseudomonas syringae pv. tabaci ATCC 11528]
 gi|289625968|ref|ZP_06458922.1| cytosine deaminase [Pseudomonas syringae pv. aesculi str.
           NCPPB3681]
 gi|289647969|ref|ZP_06479312.1| cytosine deaminase [Pseudomonas syringae pv. aesculi str. 2250]
 gi|298488192|ref|ZP_07006229.1| Cytosine deaminase [Pseudomonas savastanoi pv. savastanoi NCPPB
           3335]
 gi|71554546|gb|AAZ33757.1| cytosine deaminase [Pseudomonas syringae pv. phaseolicola 1448A]
 gi|298157471|gb|EFH98554.1| Cytosine deaminase [Pseudomonas savastanoi pv. savastanoi NCPPB
           3335]
 gi|320325406|gb|EFW81471.1| cytosine deaminase [Pseudomonas syringae pv. glycinea str. B076]
 gi|320327453|gb|EFW83466.1| cytosine deaminase [Pseudomonas syringae pv. glycinea str. race 4]
 gi|330869365|gb|EGH04074.1| cytosine deaminase [Pseudomonas syringae pv. aesculi str. 0893_23]
 gi|330877290|gb|EGH11439.1| cytosine deaminase [Pseudomonas syringae pv. glycinea str. race 4]
 gi|330988661|gb|EGH86764.1| cytosine deaminase [Pseudomonas syringae pv. lachrymans str.
           M301315]
 gi|331010292|gb|EGH90348.1| cytosine deaminase [Pseudomonas syringae pv. tabaci ATCC 11528]
          Length = 145

 Score =  137 bits (346), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 42/144 (29%), Positives = 64/144 (44%), Gaps = 10/144 (6%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           + FM  A++EAQ       IP+G+V V   KII R  NR  +    T H E+ A+    R
Sbjct: 2   DAFMQAAIDEAQLGLKEGGIPIGSVIVHEGKIIGRGHNRRVQEGSATRHGEMDALENAGR 61

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
             ++ +  +  LY TL PC MC+ AI L  IR++  G +    G  E             
Sbjct: 62  QPAR-VYRDAVLYTTLSPCAMCSGAILLYGIRKVIVGENQSFMGEEE----LLRSRGV-- 114

Query: 125 SPEIYPGISEQRSRQIIQDFFKER 148
             E+   +  Q  + ++Q F   +
Sbjct: 115 QIEV---LDNQECKHMMQGFIASK 135


>gi|115456425|ref|NP_001051813.1| Os03g0833900 [Oryza sativa Japonica Group]
 gi|40714681|gb|AAR88587.1| putative deoxycytidine deaminase [Oryza sativa Japonica Group]
 gi|108711941|gb|ABF99736.1| Guanine deaminase, putative, expressed [Oryza sativa Japonica
           Group]
 gi|113550284|dbj|BAF13727.1| Os03g0833900 [Oryza sativa Japonica Group]
 gi|215707116|dbj|BAG93576.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|218194042|gb|EEC76469.1| hypothetical protein OsI_14201 [Oryza sativa Indica Group]
 gi|222626116|gb|EEE60248.1| hypothetical protein OsJ_13255 [Oryza sativa Japonica Group]
          Length = 186

 Score =  137 bits (346), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 42/112 (37%), Positives = 60/112 (53%), Gaps = 1/112 (0%)

Query: 2   KKGNVFMSCALEEAQNAALRN-EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
            + + F+S A+EEA          P GAV V N++I+    N   +  D TAHAE+ AIR
Sbjct: 29  DRDHKFLSKAVEEAYQGVDCGHGGPFGAVVVRNDEIVVSCHNMVLDYTDPTAHAEVTAIR 88

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN 112
             C+ L +  L + ++Y + EPC MC  A+ L+RI+RL YGA       I  
Sbjct: 89  EACKKLGKIELSDCEMYASCEPCPMCFGAVHLSRIKRLVYGAKAEAAIAIGF 140


>gi|21223347|ref|NP_629126.1| deaminase [Streptomyces coelicolor A3(2)]
 gi|256785550|ref|ZP_05523981.1| deaminase [Streptomyces lividans TK24]
 gi|289769446|ref|ZP_06528824.1| deaminase [Streptomyces lividans TK24]
 gi|20520975|emb|CAD30959.1| putative deaminase [Streptomyces coelicolor A3(2)]
 gi|289699645|gb|EFD67074.1| deaminase [Streptomyces lividans TK24]
          Length = 167

 Score =  137 bits (346), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 32/129 (24%), Positives = 51/129 (39%), Gaps = 5/129 (3%)

Query: 6   VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
            +M  A+E A  +      P GA+     +I++   N+     D TAHAE+ AIR  C+ 
Sbjct: 16  AWMDKAIELATTSVRNGGGPFGALIAKGGEIVALGNNQVTAGLDPTAHAEVSAIRAACKA 75

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL-----A 120
           L    L    L  + EPC MC ++   AR+ RL + A            + +        
Sbjct: 76  LDTFSLEGCTLVTSCEPCPMCLSSALWARVDRLVFSADRHDAAVAGFDDRKFYDLFEKRP 135

Query: 121 TCHHSPEIY 129
             +    + 
Sbjct: 136 QANWPMTVE 144


>gi|168007071|ref|XP_001756232.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162692742|gb|EDQ79098.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 185

 Score =  137 bits (346), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 41/112 (36%), Positives = 62/112 (55%), Gaps = 1/112 (0%)

Query: 2   KKGNVFMSCALEEAQNAALRNEI-PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           ++   F+S A+EEA       +  P GAV V +++II R  N   +  D TAHAE+ A+R
Sbjct: 28  ERDYGFLSKAVEEAYEGVRCGDGGPFGAVVVKDDQIIVRCHNMVLKNMDPTAHAEVTAVR 87

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN 112
             C+ L +  L + ++Y + EPC MC  AI L++++RL YGA       I  
Sbjct: 88  EACKKLERYDLSDCEIYASCEPCPMCFGAIHLSKMKRLVYGAQAEAALAIGF 139


>gi|104782115|ref|YP_608613.1| cytosine deaminase [Pseudomonas entomophila L48]
 gi|95111102|emb|CAK15822.1| Cytosine deaminase [Pseudomonas entomophila L48]
          Length = 141

 Score =  137 bits (346), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 38/141 (26%), Positives = 60/141 (42%), Gaps = 10/141 (7%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  A++EA+       IP+G+V V + KII R  NR  +      H E+ A+    R  +
Sbjct: 1   MQAAIDEARKGLEEGGIPIGSVLVHDGKIIGRGHNRRVQKGSAILHGEMDALENAGRQPA 60

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
             +  +  LY TL PC MC+ AI L  I+R+  G +    G  +            H   
Sbjct: 61  S-VYQQATLYTTLSPCAMCSGAILLYGIKRVVIGENETFLGEEQLLKNRGVALDVRHDHT 119

Query: 128 IYPGISEQRSRQIIQDFFKER 148
                     R ++Q F +++
Sbjct: 120 ---------CRTLMQQFIEKK 131


>gi|149174160|ref|ZP_01852788.1| Cytosine deaminase [Planctomyces maris DSM 8797]
 gi|148847140|gb|EDL61475.1| Cytosine deaminase [Planctomyces maris DSM 8797]
          Length = 145

 Score =  136 bits (345), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 38/145 (26%), Positives = 64/145 (44%), Gaps = 12/145 (8%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           + FM  A+EEA+       +P+G+V V   KII R  N+ ++      H E+ A+    R
Sbjct: 2   DEFMQAAIEEAEKGRDAGGVPIGSVLVYEGKIIGRGHNQRQQKGSAILHGEMSALEDAGR 61

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
             ++ +     +Y TL PC MC+ AI L +I R+  G +            F        
Sbjct: 62  QPAR-VYRNSVIYTTLSPCPMCSGAIRLYQIPRVVIGENQT----------FLGDERLLL 110

Query: 125 SPEIYPGISEQ-RSRQIIQDFFKER 148
           + +I   + +  R  Q+++DF    
Sbjct: 111 TSDIELEVLQDPRCIQLMEDFIAAH 135


>gi|156846411|ref|XP_001646093.1| hypothetical protein Kpol_543p65 [Vanderwaltozyma polyspora DSM
           70294]
 gi|156116765|gb|EDO18235.1| hypothetical protein Kpol_543p65 [Vanderwaltozyma polyspora DSM
           70294]
          Length = 268

 Score =  136 bits (345), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 40/160 (25%), Positives = 67/160 (41%), Gaps = 15/160 (9%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILA 58
           + K   +M  AL+ A++A    E PV  + V      I+S   N        T+HAE +A
Sbjct: 5   LSKHVEYMEYALKLARHALDHGETPVACIFVDKKTGGIVSYGMNDTNNSLAGTSHAEFVA 64

Query: 59  IRMGCRILSQ--EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116
           I       S   +   ++ +YVT+EPC MCA+A+    I  + +G  N + GG       
Sbjct: 65  IDRIKNQFSSTFDKFEDIIVYVTVEPCIMCASALKQLGILNIVFGCGNERFGGNGTVLSI 124

Query: 117 YTL-----------ATCHHSPEIYPGISEQRSRQIIQDFF 145
                         +  +    I PGI  + +  +++ F+
Sbjct: 125 NNDTCTKLPANTVNSDSNRQDLILPGILRKEAIMLLRFFY 164


>gi|126655546|ref|ZP_01726985.1| cytosine deaminase [Cyanothece sp. CCY0110]
 gi|126623025|gb|EAZ93730.1| cytosine deaminase [Cyanothece sp. CCY0110]
          Length = 145

 Score =  136 bits (345), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 40/143 (27%), Positives = 63/143 (44%), Gaps = 12/143 (8%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           + F+  A+ EA+       IP+G+V V +NKII R  N+  +  D   HAEI  +R   R
Sbjct: 4   DEFIKAAIAEAKQGLKTGGIPIGSVLVKDNKIIGRGHNKRVQEGDPITHAEIDCLRNAGR 63

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
           I S     +  LY TL PC +CA A+    I+++  G S    G  +            H
Sbjct: 64  IGS---YQDTVLYSTLMPCYLCAGAVVQFNIKKVIAGESKTFTGAKDFMES--------H 112

Query: 125 SPEIYPGISEQRSRQIIQDFFKE 147
             E+         + +++ F + 
Sbjct: 113 GVEVIDLDLA-ECKDLMRQFIEN 134


>gi|289618605|emb|CBI54849.1| unnamed protein product [Sordaria macrospora]
          Length = 681

 Score =  136 bits (345), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 43/164 (26%), Positives = 63/164 (38%), Gaps = 45/164 (27%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
              FM  AL+ A+ A   NE PVG V V  +++I+R  N     ++ T HAE++AI    
Sbjct: 336 HAGFMREALDMARLALKTNETPVGCVLVYKDRVIARGMNATNVSRNGTRHAELMAICALL 395

Query: 64  RILSQEIL---------------------------------------------PEVDLYV 78
                  L                                              E  LYV
Sbjct: 396 SYSGDADLEPKNAQHQCNHDEPSFWGDVDPRDGHLFPYGQKLHPAPRVDRSVVSECTLYV 455

Query: 79  TLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
           T+EPC MCA+ +   RI+++Y+GA N K GG     + +  +  
Sbjct: 456 TVEPCVMCASLLRQLRIKKVYFGAVNDKFGGTGGVFRIHKNSPF 499


>gi|85118833|ref|XP_965519.1| hypothetical protein NCU01888 [Neurospora crassa OR74A]
 gi|28927329|gb|EAA36283.1| predicted protein [Neurospora crassa OR74A]
          Length = 674

 Score =  136 bits (345), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 43/164 (26%), Positives = 63/164 (38%), Gaps = 45/164 (27%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
              FM  AL+ A+ A   NE PVG V V  +++I+R  N     ++ T HAE++AI    
Sbjct: 330 HAGFMREALDMARLALKTNETPVGCVLVYKDRVIARGMNATNVSRNGTRHAELMAICALL 389

Query: 64  RILSQEIL---------------------------------------------PEVDLYV 78
                  L                                              E  LYV
Sbjct: 390 SYSGDADLEPKNVQPQCNHDEPSVWGDVDPRDGHLFPYGQKLHPAPRVDRSVISECTLYV 449

Query: 79  TLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
           T+EPC MCA+ +   RI+++Y+GA N K GG     + +  +  
Sbjct: 450 TVEPCVMCASLLRQLRIKKVYFGAVNDKFGGTGGVFRIHKNSPF 493


>gi|66047004|ref|YP_236845.1| cytosine deaminase [Pseudomonas syringae pv. syringae B728a]
 gi|289676943|ref|ZP_06497833.1| cytosine deaminase [Pseudomonas syringae pv. syringae FF5]
 gi|302187712|ref|ZP_07264385.1| cytosine deaminase [Pseudomonas syringae pv. syringae 642]
 gi|63257711|gb|AAY38807.1| Cytosine deaminase [Pseudomonas syringae pv. syringae B728a]
 gi|330977861|gb|EGH77764.1| cytosine deaminase [Pseudomonas syringae pv. aptata str. DSM 50252]
          Length = 145

 Score =  136 bits (345), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 40/145 (27%), Positives = 61/145 (42%), Gaps = 12/145 (8%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           + FM  A +EAQ       IP+G+V V   KII R  NR  +    T H E+ A+    R
Sbjct: 2   DAFMQAAFDEAQLGLKEGGIPIGSVIVHGGKIIGRGHNRRVQEGSATKHGEMDALENAGR 61

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
             +  +  +  LY TL PC MC+ AI L  IR++  G +    G  E             
Sbjct: 62  QPAS-VYRDSVLYTTLSPCAMCSGAILLYGIRKVIIGENESFMGEEE----LLRSRG--- 113

Query: 125 SPEIYPGISEQ-RSRQIIQDFFKER 148
              +   + +      +++DF   +
Sbjct: 114 ---VQIDVLDNPECTHMMKDFIASK 135


>gi|239978013|ref|ZP_04700537.1| deaminase [Streptomyces albus J1074]
 gi|291449917|ref|ZP_06589307.1| deaminase [Streptomyces albus J1074]
 gi|291352866|gb|EFE79768.1| deaminase [Streptomyces albus J1074]
          Length = 168

 Score =  136 bits (345), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 31/114 (27%), Positives = 50/114 (43%)

Query: 6   VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
            +M  A+  A ++A     P GA+   +  +++   N+     D +AHAE+ AIR  C+ 
Sbjct: 17  AWMEQAISLATDSARSGGGPFGALIAKDGLVVATGHNQVTASLDPSAHAEVSAIRAACKE 76

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
           L+   L    L  + EPC MC +    AR+ RL Y A            + +  
Sbjct: 77  LNTFSLAGCVLITSCEPCPMCLSTALWARVDRLVYAADRHDAAVAGFDDRAFYD 130


>gi|150398810|ref|YP_001322577.1| CMP/dCMP deaminase zinc-binding [Methanococcus vannielii SB]
 gi|150011513|gb|ABR53965.1| CMP/dCMP deaminase zinc-binding [Methanococcus vannielii SB]
          Length = 146

 Score =  136 bits (345), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 45/145 (31%), Positives = 69/145 (47%), Gaps = 18/145 (12%)

Query: 6   VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
            FM  A++EA+  A+   IP+GAV V  NK+I R  N+  +   V  HAE+ A+    RI
Sbjct: 3   KFMEEAIKEAKLGAIEGGIPIGAVLVYKNKVIGRGHNKRIQKNSVVFHAEMDALENAGRI 62

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIE----NGTQFYTLAT 121
            +  I  + +LY TL PC MC+ AI L  I+++  G +    G  E    NG +   L  
Sbjct: 63  -NSSIYKDCELYTTLSPCIMCSGAILLYNIKKVIIGENKTFKGAEELLEKNGVKLEVLND 121

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFK 146
            +                ++++F K
Sbjct: 122 KN-------------CIDMMEEFIK 133


>gi|312887290|ref|ZP_07746893.1| Guanine deaminase [Mucilaginibacter paludis DSM 18603]
 gi|311300248|gb|EFQ77314.1| Guanine deaminase [Mucilaginibacter paludis DSM 18603]
          Length = 170

 Score =  136 bits (344), Expect = 9e-31,   Method: Composition-based stats.
 Identities = 40/119 (33%), Positives = 57/119 (47%), Gaps = 1/119 (0%)

Query: 3   KGNVFMSCALEEAQNAALRN-EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           +   FM+ A++ + +    N   P GA+ V N K+I+  GN      D TAHAE+ AIR 
Sbjct: 9   EHLKFMNMAVKCSSDNLKTNLGGPFGAIIVKNGKVIACEGNTVTSSNDPTAHAEVNAIRA 68

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
            C+ L    L    +Y + EPC MC +AI  A+I  +YYG +            F T  
Sbjct: 69  ACQALKSPDLEGCIMYTSCEPCPMCTSAIYWAQINVVYYGNTKTDAEWAGFSDTFITEE 127


>gi|242043476|ref|XP_002459609.1| hypothetical protein SORBIDRAFT_02g007465 [Sorghum bicolor]
 gi|241922986|gb|EER96130.1| hypothetical protein SORBIDRAFT_02g007465 [Sorghum bicolor]
          Length = 175

 Score =  136 bits (344), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 35/111 (31%), Positives = 59/111 (53%), Gaps = 1/111 (0%)

Query: 2   KKGNVFMSCALEEAQNAAL-RNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           ++   F+  A++EA  A       P GAV V  ++ +  + N  R+  D +AHAE+ AIR
Sbjct: 17  ERDYKFILKAVDEAYRAVECDGGYPFGAVIVHGDEEVVSSHNLVRKDTDPSAHAEVAAIR 76

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIE 111
             C+ L +  L + ++Y + EPC MC   I L++I+++ YGA +       
Sbjct: 77  QACKKLGKINLSDCEIYTSCEPCPMCLGLIRLSKIKKVVYGAKSEVAAAAG 127


>gi|220906017|ref|YP_002481328.1| CMP/dCMP deaminase [Cyanothece sp. PCC 7425]
 gi|219862628|gb|ACL42967.1| CMP/dCMP deaminase zinc-binding [Cyanothece sp. PCC 7425]
          Length = 161

 Score =  136 bits (344), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 39/122 (31%), Positives = 54/122 (44%), Gaps = 5/122 (4%)

Query: 3   KGNVFMSCALEEAQNAALR--NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +    +  A+E  + AAL      P G V   +  II+   NR     D T H E+ AIR
Sbjct: 5   EDERLIRRAIELGRRAALDLCTGGPFGCVIAKDGAIIAEGYNRVVAENDPTWHGEMAAIR 64

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNP---KGGGIENGTQFY 117
              + L    L    LY + EPC MCAAA   AR+ R+ Y +      K GG ++   + 
Sbjct: 65  QAAKQLQTFDLSGCVLYTSAEPCPMCAAACWWARLDRIVYASRVEDALKYGGFDDREIYL 124

Query: 118 TL 119
            L
Sbjct: 125 DL 126


>gi|254282421|ref|ZP_04957389.1| guanine deaminase [gamma proteobacterium NOR51-B]
 gi|219678624|gb|EED34973.1| guanine deaminase [gamma proteobacterium NOR51-B]
          Length = 155

 Score =  136 bits (344), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 37/115 (32%), Positives = 50/115 (43%), Gaps = 1/115 (0%)

Query: 7   FMSCALEEAQNAALRN-EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           F+  A++ A +        P GAV V NN++I+ + NR     D TAHAE+ AIR     
Sbjct: 5   FLHRAIQLASDNIDSGKGGPFGAVIVKNNEMIAESANRVLAHSDPTAHAEVEAIRSAGEA 64

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
           L    L    LY + EPC MC  AI  ARI  +Y+              +     
Sbjct: 65  LGTFDLSGCTLYASCEPCPMCLGAIYWARISAVYFAGDRKDAESAGFDDKLIYDE 119


>gi|16331502|ref|NP_442230.1| hypothetical protein sll0051 [Synechocystis sp. PCC 6803]
 gi|1001158|dbj|BAA10300.1| sll0051 [Synechocystis sp. PCC 6803]
          Length = 159

 Score =  136 bits (344), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 34/103 (33%), Positives = 53/103 (51%), Gaps = 2/103 (1%)

Query: 2   KKGNVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
           ++   +M  A+   ++A + N    P G V V + ++I  AGN   +  D +AHAE+ AI
Sbjct: 4   EQDREYMRQAIAIMRDAGVVNKTGGPFGVVIVKDGEVIGAAGNSVIQDNDPSAHAEVNAI 63

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGA 102
           R  C+ +    L    +Y + E C MC A    ARI ++YY A
Sbjct: 64  REACKTVGSWNLEGAVMYSSCECCPMCYATSYWARIDKIYYAA 106


>gi|53804410|ref|YP_113955.1| zinc-binding domain-containing protein [Methylococcus capsulatus
           str. Bath]
 gi|53758171|gb|AAU92462.1| zinc-binding domain protein [Methylococcus capsulatus str. Bath]
          Length = 164

 Score =  136 bits (344), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 42/154 (27%), Positives = 67/154 (43%), Gaps = 18/154 (11%)

Query: 2   KKGNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
           ++   +M  A++  + A    R   P GAV V   ++++ AGN      D TAHAEI AI
Sbjct: 9   EQDRAYMRLAIQTMRRAGIVDRTGGPFGAVIVRGGQVLAVAGNSVIRDNDPTAHAEINAI 68

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
           R  CR +    L    LY + E C MC A+   ARI ++YY AS        +    +  
Sbjct: 69  REACRRIGSYDLSGAVLYSSCECCPMCYASAYWARIDQIYYAAS------WHDYEDLFDD 122

Query: 120 ATCHHSPEIYPG---------ISEQRSRQIIQDF 144
           +  H    +            I  + + ++ ++F
Sbjct: 123 SRIHEDI-VKSYAERHLAPQQIMREEALEVWREF 155


>gi|302871184|ref|YP_003839820.1| riboflavin biosynthesis protein RibD [Caldicellulosiruptor
           obsidiansis OB47]
 gi|302574043|gb|ADL41834.1| riboflavin biosynthesis protein RibD [Caldicellulosiruptor
           obsidiansis OB47]
          Length = 371

 Score =  136 bits (344), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 42/156 (26%), Positives = 68/156 (43%), Gaps = 20/156 (12%)

Query: 1   MK--KGNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56
           MK    + +M+ ALE A+ A   +     VG V V N  II +  ++    K    HAE+
Sbjct: 1   MKCLSHSYYMNMALELAKKASPLVLPNPRVGCVIVKNGTIIGKGYHQKYGEK----HAEV 56

Query: 57  LAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGI 110
           LAI    +  +   L    +YV+LEPC        C  AI  + I+++     +P     
Sbjct: 57  LAIEDAIKNGNS--LKNATMYVSLEPCCHFGKQPPCTEAIIKSGIKKVIIATRDPNPLVN 114

Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
             G Q        H  E+  G+ ++ +  + ++FFK
Sbjct: 115 GKGIQILKQ----HGIEVVEGVLQKEAESVNKEFFK 146


>gi|312134474|ref|YP_004001812.1| riboflavin biosynthesis protein ribd [Caldicellulosiruptor
           owensensis OL]
 gi|311774525|gb|ADQ04012.1| riboflavin biosynthesis protein RibD [Caldicellulosiruptor
           owensensis OL]
          Length = 371

 Score =  136 bits (343), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 43/152 (28%), Positives = 67/152 (44%), Gaps = 18/152 (11%)

Query: 3   KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
             + +M+ ALE A+ A  L    P VG V V N  II +  ++    K    HAE+LAI 
Sbjct: 5   SHSYYMNMALELAKKASYLVLPNPRVGCVIVKNGTIIGKGYHQKYGEK----HAEVLAIE 60

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
               I +   L    +YV+LEPC        C  AI  + I+++     +P       G 
Sbjct: 61  DA--IKNGYSLKNATMYVSLEPCSHFGKQPPCTEAIIKSGIKKVVVATRDPNPIVNGKGI 118

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
           Q        H  E+  G+ ++ +  + ++FFK
Sbjct: 119 QILKQ----HGIEVVEGVLQKEAEIVNKEFFK 146


>gi|188589366|ref|YP_001919994.1| cytidine/deoxycytidylate deaminase family protein [Clostridium
           botulinum E3 str. Alaska E43]
 gi|188499647|gb|ACD52783.1| guanine deaminase [Clostridium botulinum E3 str. Alaska E43]
          Length = 157

 Score =  136 bits (343), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 40/113 (35%), Positives = 58/113 (51%), Gaps = 2/113 (1%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEI-PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
           M++  + M   +++ +   L  E  P GA  V ++KII+ A N   +  D TAH E+ AI
Sbjct: 1   MQQKEI-MDLCVKQCKEGMLNLEGGPFGAAIVKDSKIIALANNTVIKDNDPTAHGEMNAI 59

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN 112
           R  C  LS   L   +LY T EPC MC +AI  + I ++YYG +      I  
Sbjct: 60  RQACNKLSTFDLSGCELYTTSEPCPMCMSAIIWSNISKVYYGCTVKDAADIGF 112


>gi|168002130|ref|XP_001753767.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162695174|gb|EDQ81519.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 191

 Score =  136 bits (343), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 43/118 (36%), Positives = 64/118 (54%), Gaps = 1/118 (0%)

Query: 4   GNVFMSCALEEAQNAALRNEI-PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
              F++ A +EA  A  + E  P GAV V + +I+++A N   + KD TAHAEI+AI+  
Sbjct: 38  DYNFLTVAAKEADMAMRKEEGGPFGAVIVRDGEIVAQAHNEVLKQKDPTAHAEIVAIQKA 97

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
           C+ L +  L +  +Y + EPC M  AA+ LAR+ RL YGA       +   +     A
Sbjct: 98  CKKLGKIELSDCVIYSSCEPCPMSFAAMYLARLPRLVYGAQAEAAHDLGFDSSHIADA 155


>gi|159045329|ref|YP_001534123.1| hypothetical protein Dshi_2789 [Dinoroseobacter shibae DFL 12]
 gi|157913089|gb|ABV94522.1| hypothetical protein Dshi_2789 [Dinoroseobacter shibae DFL 12]
          Length = 151

 Score =  136 bits (343), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 65/129 (50%), Positives = 87/129 (67%), Gaps = 1/129 (0%)

Query: 22  NEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80
            E+PVGAV +    K+++RAGNR REL D TAHAE+LAIR  C     E LP   LYVTL
Sbjct: 22  GEVPVGAVLIDPAGKVLARAGNRTRELSDPTAHAEVLAIRAACAAAGSERLPGAVLYVTL 81

Query: 81  EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140
           EPC +CAA I+ ARI RL YGA++PK GG+ +G + ++    HH PE+  GI+  ++  +
Sbjct: 82  EPCAICAATIAAARIARLVYGAADPKSGGVAHGARVFSHPQSHHVPEVIDGIAAAQAEAL 141

Query: 141 IQDFFKERR 149
           ++DFF  RR
Sbjct: 142 LKDFFAARR 150


>gi|320354083|ref|YP_004195422.1| CMP/dCMP deaminase zinc-binding protein [Desulfobulbus propionicus
           DSM 2032]
 gi|320122585|gb|ADW18131.1| CMP/dCMP deaminase zinc-binding protein [Desulfobulbus propionicus
           DSM 2032]
          Length = 173

 Score =  136 bits (343), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 46/150 (30%), Positives = 69/150 (46%), Gaps = 6/150 (4%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRA--GNRNRELKDVTAHAEILA 58
           M +   FM+ ALEEA+ A    E PVG   V NN I++R    N     ++   HAE++ 
Sbjct: 2   MSEHEQFMAVALEEARLALAEGEFPVGCAMVANNGIVARGRRHNSIEGYRNEIDHAEVVT 61

Query: 59  IRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
           +R          L  V +Y T+EPC MC A + L+ IR   +   +  GGG       Y 
Sbjct: 62  LRRLIAEQPGLDLATVTVYTTMEPCLMCYATLLLSGIRSFVWAYEDVMGGGA--NLPLYM 119

Query: 119 LATCHHSPEI--YPGISEQRSRQIIQDFFK 146
           L T +   ++     +    S ++ Q FF+
Sbjct: 120 LNTLYAQMQVHLIDRVLRTESLRLFQQFFR 149


>gi|307823574|ref|ZP_07653803.1| CMP/dCMP deaminase zinc-binding [Methylobacter tundripaludum SV96]
 gi|307735559|gb|EFO06407.1| CMP/dCMP deaminase zinc-binding [Methylobacter tundripaludum SV96]
          Length = 155

 Score =  136 bits (343), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 38/118 (32%), Positives = 59/118 (50%), Gaps = 1/118 (0%)

Query: 4   GNVFMSCALEEAQNAALRN-EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
             VF+  A++ A   A      P GA+ V +N++++ +GN+     D TAHAE++AIR+ 
Sbjct: 2   HKVFLQQAVDLAAENARSGQGGPYGAIIVKDNQLVAASGNKVTSTIDPTAHAEVMAIRLA 61

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
           C+ L+   L    LY + EPC MC  AI  AR+ ++Y+  S            F    
Sbjct: 62  CKKLNDFQLQGCILYSSCEPCPMCLGAIYWARLAKVYFACSRHDAAAANFDDSFIYDE 119


>gi|91773185|ref|YP_565877.1| CMP/dCMP deaminase, zinc-binding [Methanococcoides burtonii DSM
           6242]
 gi|91712200|gb|ABE52127.1| Cytosine deaminase [Methanococcoides burtonii DSM 6242]
          Length = 143

 Score =  136 bits (343), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 39/143 (27%), Positives = 63/143 (44%), Gaps = 12/143 (8%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           + FM  A++EA++      IP+G+V V ++ II +  N   +  D  AHAEI  +R   R
Sbjct: 2   DEFMQVAIDEARSGLNSGGIPIGSVLVRDDLIIGKGHNLRVQQDDPMAHAEISCLRDAGR 61

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
           +       +  LY TL PC +CA A+    I+++  G S    G  E            H
Sbjct: 62  V-GSYR--DSILYSTLMPCYLCAGAVVQFGIKKVIVGESRTFSGAREFMES--------H 110

Query: 125 SPEIYPGISEQRSRQIIQDFFKE 147
             E+   +       ++ DF  +
Sbjct: 111 GVEVVD-LDLDECVAMMDDFISK 132


>gi|88809683|ref|ZP_01125190.1| hypothetical protein WH7805_00725 [Synechococcus sp. WH 7805]
 gi|88786433|gb|EAR17593.1| hypothetical protein WH7805_00725 [Synechococcus sp. WH 7805]
          Length = 159

 Score =  136 bits (343), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 34/124 (27%), Positives = 55/124 (44%), Gaps = 8/124 (6%)

Query: 2   KKGNVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
            +    M  A+   + A + N    P GAV   + K++S +GN      D +AHAE+ AI
Sbjct: 4   DQDRTLMKEAIRLMREAGVVNKSGGPFGAVIAKDGKVVSASGNSVVRDLDPSAHAEVNAI 63

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
           R  C+ L    L    +Y + E C MC A    A IR+++Y A         + +  ++ 
Sbjct: 64  RAACKALGTWDLTGCVMYTSCECCPMCYATAYWAGIRKVFYAA------AWSDYSDLFSD 117

Query: 120 ATCH 123
              +
Sbjct: 118 QEIN 121


>gi|118580396|ref|YP_901646.1| cytosine deaminase [Pelobacter propionicus DSM 2379]
 gi|118503106|gb|ABK99588.1| Cytosine deaminase [Pelobacter propionicus DSM 2379]
          Length = 145

 Score =  136 bits (343), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 42/144 (29%), Positives = 62/144 (43%), Gaps = 10/144 (6%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           + FM  ALEEA+       IP+G++ V    ++ R  NR  +   V  HAE+ A+    R
Sbjct: 2   DEFMQAALEEARKGLAEGGIPIGSLVVHRGAVLGRGHNRRVQKGSVILHAEMDALENAGR 61

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
            +   I  E  LY TL PC MCA AI L  I R+  G +    G  E             
Sbjct: 62  -MPAAIYRESVLYTTLSPCPMCAGAILLYGIPRVVIGENRNFRGEEE----LLRSRGV-- 114

Query: 125 SPEIYPGISEQRSRQIIQDFFKER 148
             E+   + ++    +++ F   R
Sbjct: 115 QVEL---LQDEECIALMRQFIDNR 135


>gi|68466625|ref|XP_722508.1| potential tRNA wobble position adenosine deaminase subunit [Candida
           albicans SC5314]
 gi|68466908|ref|XP_722369.1| potential tRNA wobble position adenosine deaminase subunit [Candida
           albicans SC5314]
 gi|46444339|gb|EAL03614.1| potential tRNA wobble position adenosine deaminase subunit [Candida
           albicans SC5314]
 gi|46444487|gb|EAL03761.1| potential tRNA wobble position adenosine deaminase subunit [Candida
           albicans SC5314]
          Length = 281

 Score =  136 bits (343), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 40/150 (26%), Positives = 71/150 (47%), Gaps = 3/150 (2%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILA 58
           +     +M+ +L     A L NE PV  + V   ++KIIS   N      + T HAE +A
Sbjct: 5   LTSHFQYMAISLFVGYKALLNNETPVSCIVVDSKSDKIISIGYNYTNHSLNGTQHAEFIA 64

Query: 59  IRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
           ++      S     ++ LYVT+EPC MCA+ +    I+++ +G  N + GG       ++
Sbjct: 65  LQRFGEQKSSIDYNDLILYVTVEPCIMCASYLRQLGIKKVIFGCGNDRFGGNGTILSIHS 124

Query: 119 LATC-HHSPEIYPGISEQRSRQIIQDFFKE 147
             T  + +     GI      Q++++F+ +
Sbjct: 125 DITLPNAAYSSIGGICRTEGIQLLRNFYIQ 154


>gi|331017345|gb|EGH97401.1| cytosine deaminase [Pseudomonas syringae pv. lachrymans str.
           M302278PT]
          Length = 145

 Score =  135 bits (342), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 43/144 (29%), Positives = 66/144 (45%), Gaps = 10/144 (6%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           + FM  A++EAQ       IP+G+V V   KII R  NR  +    T H E+ A+    R
Sbjct: 2   DAFMQAAIDEAQLGLDEGGIPIGSVIVHAGKIIGRGHNRRVQEGSATRHGEMDALENAGR 61

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
             +  +  E  LY TL PC MC+ AI L  IR++  G +    G  E             
Sbjct: 62  QPAS-VYREAVLYTTLSPCAMCSGAILLYGIRKVIVGENQSFMGEEE----LLRSRGV-- 114

Query: 125 SPEIYPGISEQRSRQIIQDFFKER 148
             E+   + ++R + ++Q F  ++
Sbjct: 115 QIEV---LDDERCKHMMQGFIADK 135


>gi|104782249|ref|YP_608747.1| deaminase [Pseudomonas entomophila L48]
 gi|95111236|emb|CAK15956.1| putative deaminase [Pseudomonas entomophila L48]
          Length = 152

 Score =  135 bits (342), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 35/103 (33%), Positives = 52/103 (50%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
             +M  AL+ A+        P GAV V   ++I+RA N     +D T HAE+ AIR    
Sbjct: 4   ETYMREALDLARANIQAGGRPFGAVLVYQGRVIARAVNEIHSTQDPTRHAEMQAIRQASE 63

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKG 107
           +L +  L   ++Y +  PC MC AA+ L  I R ++   N +G
Sbjct: 64  VLGRARLDGAEIYASGHPCPMCLAAMHLCGIERAWFAYDNEEG 106


>gi|227487346|ref|ZP_03917662.1| tRNA-specific adenosine deaminase [Corynebacterium glucuronolyticum
           ATCC 51867]
 gi|227092570|gb|EEI27882.1| tRNA-specific adenosine deaminase [Corynebacterium glucuronolyticum
           ATCC 51867]
          Length = 161

 Score =  135 bits (342), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 44/128 (34%), Positives = 61/128 (47%), Gaps = 1/128 (0%)

Query: 23  EIPVGA-VAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81
           ++PV A V      +I    N  +   D TAHAE+ AIRM  R     IL   +L VTLE
Sbjct: 28  DVPVAAAVFDAEGTMIGWGTNERKATSDPTAHAEVQAIRMAARARRDYILENTELVVTLE 87

Query: 82  PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141
           PCTMCA A   ARI  L +GA   K G + +           +  E+  G+        +
Sbjct: 88  PCTMCAGAFLAARIPSLVFGAFEEKTGAVGSVIDVVREPALPNRVEVVGGVLADDCAAPL 147

Query: 142 QDFFKERR 149
           + FF+++R
Sbjct: 148 RAFFRDKR 155


>gi|255724014|ref|XP_002546936.1| hypothetical protein CTRG_01242 [Candida tropicalis MYA-3404]
 gi|240134827|gb|EER34381.1| hypothetical protein CTRG_01242 [Candida tropicalis MYA-3404]
          Length = 279

 Score =  135 bits (341), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 38/150 (25%), Positives = 69/150 (46%), Gaps = 4/150 (2%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILA 58
           + +   +M+ +L     A L NE PV  + V    ++IIS   N      + T HAE +A
Sbjct: 5   LSRHFKYMAISLFVGYKALLNNETPVSCIVVNSKTDEIISIGYNYTNHSLNGTQHAEFIA 64

Query: 59  IRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
           ++            ++ LYVT+EPC MCA+ +    I ++ +G  N + GG       + 
Sbjct: 65  LQRF-ESDESINYSDLILYVTVEPCIMCASYLRQLGIGKVIFGCGNDRFGGNGTVLPVHK 123

Query: 119 LATCHHSPEI-YPGISEQRSRQIIQDFFKE 147
             +  + P +   GI      Q++++F+ +
Sbjct: 124 DPSLPNKPYLSVGGICRAEGIQLLRNFYIQ 153


>gi|217979127|ref|YP_002363274.1| CMP/dCMP deaminase zinc-binding [Methylocella silvestris BL2]
 gi|217504503|gb|ACK51912.1| CMP/dCMP deaminase zinc-binding [Methylocella silvestris BL2]
          Length = 145

 Score =  135 bits (341), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 40/143 (27%), Positives = 56/143 (39%), Gaps = 8/143 (5%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
               FM  AL+EA       + P GA+   + + I+   N      D TAHAE++A+R  
Sbjct: 6   TDERFMRAALKEA----ALGDFPFGALIAQDGETIATGRNLGETNDDPTAHAEMVALRGV 61

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNP----KGGGIENGTQFYT 118
                   L +  LY T EPC MC  AI    + RL Y AS      + G IE   +   
Sbjct: 62  IAAYGAARLRDSTLYATGEPCPMCMGAIIWCGVGRLVYAASIEQLAQRIGQIETPCRDLA 121

Query: 119 LATCHHSPEIYPGISEQRSRQII 141
                    I  G+    +  + 
Sbjct: 122 RRASFTEICIEGGLLADEAMALF 144


>gi|75908250|ref|YP_322546.1| cytidine/deoxycytidylate deaminase [Anabaena variabilis ATCC 29413]
 gi|75701975|gb|ABA21651.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [Anabaena
           variabilis ATCC 29413]
          Length = 141

 Score =  135 bits (341), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 42/142 (29%), Positives = 62/142 (43%), Gaps = 10/142 (7%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
             FM  A+ EA+      + P GAV V ++++++ A N      D +AHAEI  +R    
Sbjct: 4   EYFMRLAIAEAKK----GDAPYGAVIVKDDQVVAFAHNTVGRDNDPSAHAEINVVRRLTA 59

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF-----YTL 119
            L    L    +Y T EPC MCAAA   + I  + YGAS      + N  Q        +
Sbjct: 60  QLQSFSLEGYSIYTTGEPCPMCAAACVWSGIAEIIYGASIQDL-ILANQAQIQISCEEVI 118

Query: 120 ATCHHSPEIYPGISEQRSRQII 141
           A    + ++  GI  Q    + 
Sbjct: 119 AKSFRNIKVTKGILRQECLNLF 140


>gi|295395473|ref|ZP_06805668.1| tRNA-specific adenosine deaminase [Brevibacterium mcbrellneri ATCC
           49030]
 gi|294971644|gb|EFG47524.1| tRNA-specific adenosine deaminase [Brevibacterium mcbrellneri ATCC
           49030]
          Length = 142

 Score =  135 bits (341), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 37/109 (33%), Positives = 54/109 (49%)

Query: 41  GNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
            NR     D TAHAE++A+R     L +  L    L VTLEPC MCA A   AR+  + +
Sbjct: 34  RNRREADGDPTAHAEVVALRAAASRLGRWRLDGATLVVTLEPCAMCAGAAVGARVDAIVF 93

Query: 101 GASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
           GA + K G   +           H P++Y G+    +  ++++FF  RR
Sbjct: 94  GAFDEKAGACGSQWDLPRDRGSLHRPQVYAGVMSVEAVHVLEEFFAARR 142


>gi|72392897|ref|XP_847249.1| deaminase [Trypanosoma brucei TREU927]
 gi|62176083|gb|AAX70202.1| deaminase, putative [Trypanosoma brucei]
 gi|70803279|gb|AAZ13183.1| deaminase, putative [Trypanosoma brucei brucei strain 927/4
           GUTat10.1]
          Length = 225

 Score =  135 bits (341), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 47/183 (25%), Positives = 72/183 (39%), Gaps = 40/183 (21%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNK-----------------IISRAGNRNREL 47
           +VFM  AL+EA  A    E+PVG V V  +                  I++R  N     
Sbjct: 25  DVFMQAALKEATCALEEGEVPVGCVLVKADSSTAAQAQAGDDLALQKLIVARGRNATNRK 84

Query: 48  KDVTAHAEILA----IRMGCRILS------------QEILPEVDLYVTLEPCTMCAAAIS 91
               AHAE +A    +R      S             + L +  LYV +EPC MCAA + 
Sbjct: 85  GHALAHAEFVAVEELLRQATAGTSENIGGGGNCGAVSQDLADYVLYVVVEPCIMCAAMLL 144

Query: 92  LARIRRLYYGASNPKGGGIENGTQFYT-------LATCHHSPEIYPGISEQRSRQIIQDF 144
             R+R++Y+G +NP+ GG       +                E   G   + +  ++Q F
Sbjct: 145 YNRVRKVYFGCTNPRFGGNGTVLSVHNSYKGCSGEDAALIGYESCGGYRAEEAVVLLQQF 204

Query: 145 FKE 147
           ++ 
Sbjct: 205 YRR 207


>gi|262372745|ref|ZP_06066024.1| guanine deaminase (Guanase) (guanine aminase) (guanine
           aminohydrolase) (GAH) (GDEase) [Acinetobacter junii
           SH205]
 gi|262312770|gb|EEY93855.1| guanine deaminase (Guanase) (guanine aminase) (guanine
           aminohydrolase) (GAH) (GDEase) [Acinetobacter junii
           SH205]
          Length = 151

 Score =  135 bits (341), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 39/126 (30%), Positives = 61/126 (48%), Gaps = 1/126 (0%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
               F+  A++ A     R   P  A+ V NN+IIS   N+ +   D TAHAE+LA+R  
Sbjct: 2   DNQKFIQQAVDLALENVKRGGRPFAALVVKNNEIISTGVNQIKLTNDPTAHAELLALREA 61

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIE-NGTQFYTLAT 121
            R+LS   L +  +Y + +PC MC AAI +A I ++++  SN        +  +   L  
Sbjct: 62  GRLLSTPNLEDCTVYASGQPCPMCLAAIRMAGISKVFFAFSNTDAEPFGLSTAKIAELLR 121

Query: 122 CHHSPE 127
                +
Sbjct: 122 VEPQFQ 127


>gi|75764881|ref|ZP_00744241.1| Cytosine deaminase family [Bacillus thuringiensis serovar
           israelensis ATCC 35646]
 gi|74487631|gb|EAO51487.1| Cytosine deaminase family [Bacillus thuringiensis serovar
           israelensis ATCC 35646]
          Length = 104

 Score =  135 bits (341), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 33/85 (38%), Positives = 47/85 (55%)

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
                 L +  LYVTLEPC MCA  I L+R++R+ YGAS+PKGG         T    +H
Sbjct: 5   KNRTWRLEDATLYVTLEPCPMCAGGIVLSRVKRVVYGASDPKGGCAGTLMNLLTDERFNH 64

Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149
             E+  G+ E+    ++ +FF+E R
Sbjct: 65  QCEVVTGVLEEECGTLLTNFFRELR 89


>gi|330967403|gb|EGH67663.1| cytosine deaminase [Pseudomonas syringae pv. actinidiae str.
           M302091]
          Length = 145

 Score =  135 bits (341), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 43/144 (29%), Positives = 65/144 (45%), Gaps = 10/144 (6%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           + FM  A++EAQ       IP+G+V V   KII R  NR  +    T H E+ A+    R
Sbjct: 2   DAFMQAAIDEAQLGLDEGGIPIGSVIVHAGKIIGRGHNRRVQEGSATRHGEMDALENAGR 61

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
             +  +  E  LY TL PC MC+ AI L  IR++  G +    G  E             
Sbjct: 62  QPAS-VYREAVLYTTLSPCAMCSGAILLYGIRKVIVGENQSFMGEEE----LLRSRGV-- 114

Query: 125 SPEIYPGISEQRSRQIIQDFFKER 148
             E+   +  +R + ++Q F  ++
Sbjct: 115 QIEV---LDNERCKHMMQGFIADK 135


>gi|47156908|gb|AAT12300.1| cytidine and deoxycytidylate deaminase-like protein [Antonospora
           locustae]
          Length = 156

 Score =  135 bits (340), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 48/146 (32%), Positives = 68/146 (46%), Gaps = 17/146 (11%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M   + FM  A+ EA+ A    E+PVG V V  + +ISR  N      D  AHAE++A+R
Sbjct: 1   MDYNSQFMDEAVSEAEKALEAGEVPVGCVVVREDAVISRGHNMTNRESDPLAHAELVALR 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIR-RLYYGASNPKGGGIENGTQFYTL 119
                        +  Y+T EPC MC     L RIR R++YG  NP  GG        + 
Sbjct: 61  HCASA------ESLVFYITCEPCIMCLG--VLGRIRARVFYGCRNPIFGGT-TVLGGVSE 111

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFF 145
           A C H       +  + + +++Q FF
Sbjct: 112 ALCTH-------VHRESAVRLLQRFF 130


>gi|303276308|ref|XP_003057448.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226461800|gb|EEH59093.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 189

 Score =  135 bits (340), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 49/154 (31%), Positives = 70/154 (45%), Gaps = 11/154 (7%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM- 61
                M  AL EA  A  R E+PVG V VL+N+I++R  NR  E ++ T HAE  AI   
Sbjct: 7   DDERHMRAALAEATAALDRWEVPVGCVLVLDNEIVARGSNRTNERRNGTRHAEFEAIDAL 66

Query: 62  ---GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
                   +     +  LYVT EPC MCA A+SL   R + YG  N K GG  +      
Sbjct: 67  LAAHANDANAARFEDCVLYVTCEPCIMCAGALSLLGCRAVVYGCGNDKFGGNGSILSDGG 126

Query: 119 LA-------TCHHSPEIYPGISEQRSRQIIQDFF 145
            A           +     G+  + + ++++ F+
Sbjct: 127 DAAASNGARGARRTYPSVGGLFAEDAVELLRRFY 160


>gi|45185761|ref|NP_983477.1| ACR075Cp [Ashbya gossypii ATCC 10895]
 gi|44981516|gb|AAS51301.1| ACR075Cp [Ashbya gossypii ATCC 10895]
          Length = 245

 Score =  135 bits (340), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 42/153 (27%), Positives = 68/153 (44%), Gaps = 12/153 (7%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVL--NNKIISRAGNRNRELKDVTAHAEILA 58
           M +    M  A+  A+ A    E PV  V V   +++II+   N         AHAE  A
Sbjct: 4   MTQH---MRTAIRLARYALDHGETPVACVFVHTPSDQIIAYGMNDTNRSLTGIAHAEFGA 60

Query: 59  IRMGCRILSQEI---LPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
           I     +  ++      EV +YVT+EPC MCA+A+    I R+ +G  N + GG  +   
Sbjct: 61  IAQVQELFGEQDASIFKEVTVYVTVEPCVMCASALKQLGIGRVIFGCGNERFGGNGSILA 120

Query: 116 FYTL---ATCHHSPEIYPGISEQRSRQIIQDFF 145
                  A  +    I PG+  + +  +++ F+
Sbjct: 121 VQRDTSTAPQNRHLAI-PGVLRREAIMLLRYFY 152


>gi|213969586|ref|ZP_03397722.1| cytosine deaminase [Pseudomonas syringae pv. tomato T1]
 gi|301383360|ref|ZP_07231778.1| cytosine deaminase [Pseudomonas syringae pv. tomato Max13]
 gi|302058808|ref|ZP_07250349.1| cytosine deaminase [Pseudomonas syringae pv. tomato K40]
 gi|302134497|ref|ZP_07260487.1| cytosine deaminase [Pseudomonas syringae pv. tomato NCPPB 1108]
 gi|213925682|gb|EEB59241.1| cytosine deaminase [Pseudomonas syringae pv. tomato T1]
          Length = 145

 Score =  135 bits (340), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 43/144 (29%), Positives = 66/144 (45%), Gaps = 10/144 (6%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           + FM  A++EAQ       IP+G+V V   KII R  NR  +    T H E+ A+    R
Sbjct: 2   DAFMQAAIDEAQLGLDEGGIPIGSVIVHAGKIIGRGHNRRVQEGSATRHGEMDALENAGR 61

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
             +  +  E  LY TL PC MC+ AI L  IR++  G ++   G  E             
Sbjct: 62  QPAS-VYREAVLYTTLSPCAMCSGAILLYGIRKVIVGENHSFMGEEE----LLRSRGV-- 114

Query: 125 SPEIYPGISEQRSRQIIQDFFKER 148
             E+   +  +R + ++Q F  ++
Sbjct: 115 QIEV---LDNERCKHMMQGFISDK 135


>gi|28868808|ref|NP_791427.1| cytosine deaminase [Pseudomonas syringae pv. tomato str. DC3000]
 gi|28852047|gb|AAO55122.1| cytosine deaminase [Pseudomonas syringae pv. tomato str. DC3000]
          Length = 145

 Score =  135 bits (340), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 43/144 (29%), Positives = 66/144 (45%), Gaps = 10/144 (6%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           + FM  A++EAQ       IP+G+V V   KII R  NR  +    T H E+ A+    R
Sbjct: 2   DAFMQAAIDEAQLGLDEGGIPIGSVIVHAGKIIGRGHNRRVQEGSATRHGEMDALENAGR 61

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
             +  +  E  LY TL PC MC+ AI L  IR++  G ++   G  E             
Sbjct: 62  QPAS-VYREAVLYTTLSPCAMCSGAILLYGIRKVIVGENHSFMGEEE----LLRSRGV-- 114

Query: 125 SPEIYPGISEQRSRQIIQDFFKER 148
             E+   +  +R + ++Q F  ++
Sbjct: 115 QIEV---LDNERCKHMMQGFIADK 135


>gi|224125580|ref|XP_002319621.1| predicted protein [Populus trichocarpa]
 gi|222857997|gb|EEE95544.1| predicted protein [Populus trichocarpa]
          Length = 186

 Score =  134 bits (339), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 37/100 (37%), Positives = 58/100 (58%), Gaps = 1/100 (1%)

Query: 2   KKGNVFMSCALEEAQNAALRNEI-PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
            + + F+S A+EEA       +  P GAV V N++++    N   +  D TAHAE+  IR
Sbjct: 29  DRDHKFLSRAVEEAYKGVECGDGGPFGAVVVRNDEVVMSCHNMVLKNTDPTAHAEVTVIR 88

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
             C+ L++  L + ++Y + EPC MC  AI L+R++RL Y
Sbjct: 89  EACKKLNRIELSDCEIYASCEPCPMCFGAIHLSRLKRLVY 128


>gi|56965577|ref|YP_177311.1| guanine deaminase [Bacillus clausii KSM-K16]
 gi|56911823|dbj|BAD66350.1| guanine deaminase [Bacillus clausii KSM-K16]
          Length = 156

 Score =  134 bits (339), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 33/115 (28%), Positives = 52/115 (45%), Gaps = 1/115 (0%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRM 61
             +++++  +  A  +      P  A+ V  N  II +  N      D TAHAE++AIR 
Sbjct: 2   DHSMYLAKTIHLAAESIQSGGGPFAAIIVDPNGAIIGQGTNSVTNDNDPTAHAEVVAIRD 61

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116
            C  ++   L    LY + EPC MC  AI  AR + +Y+ A+      +     F
Sbjct: 62  ACNTINDFQLEGCTLYTSCEPCPMCLGAIYWARPKAVYFAATQEDAAAVGFDDAF 116


>gi|224130724|ref|XP_002328360.1| predicted protein [Populus trichocarpa]
 gi|222838075|gb|EEE76440.1| predicted protein [Populus trichocarpa]
          Length = 184

 Score =  134 bits (339), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 38/100 (38%), Positives = 59/100 (59%), Gaps = 1/100 (1%)

Query: 2   KKGNVFMSCALEEAQNAALRNEI-PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
            + + F++ A+EEA       +  P GAV V N++II    N   +  D TAHAE+ A+R
Sbjct: 27  DRDHKFLTRAVEEAYKGVECGDGGPFGAVVVQNDEIIMSCHNMVLKNTDPTAHAEVTAVR 86

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
             C+ L++  L + ++Y + EPC MC  AI L+R++RL Y
Sbjct: 87  EACKKLNRIELSDCEIYASCEPCPMCFGAIHLSRVKRLVY 126


>gi|70733728|ref|YP_257368.1| guanine deaminase [Pseudomonas fluorescens Pf-5]
 gi|68348027|gb|AAY95633.1| guanine deaminase, putative [Pseudomonas fluorescens Pf-5]
          Length = 153

 Score =  134 bits (339), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 35/107 (32%), Positives = 55/107 (51%), Gaps = 1/107 (0%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M     ++  A+  A+    +   P GA+ V N ++++ A N     +D TAHAE+LAIR
Sbjct: 1   MHDDQHYLQQAVALARRNVEQGGRPFGALLVRNGRVLAEAVNEIHLSQDPTAHAEMLAIR 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKG 107
              R L    L +  +Y + +PC MC AA+ L  + R  + ASN + 
Sbjct: 61  AASRQLG-PRLDDCVIYASGQPCPMCLAAMYLCGVSRAVFAASNEQA 106


>gi|261330463|emb|CBH13447.1| deaminase, putative [Trypanosoma brucei gambiense DAL972]
          Length = 225

 Score =  134 bits (339), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 47/183 (25%), Positives = 72/183 (39%), Gaps = 40/183 (21%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNK-----------------IISRAGNRNREL 47
           +VFM  AL+EA  A    E+PVG V V  +                  I++R  N     
Sbjct: 25  DVFMQAALKEATCALEEGEVPVGCVLVKADSSTAAQAQAGDDLALQKLIVARGRNATNRK 84

Query: 48  KDVTAHAEILA----IRMGCRILS------------QEILPEVDLYVTLEPCTMCAAAIS 91
               AHAE +A    +R      S             + L +  LYV +EPC MCAA + 
Sbjct: 85  GHALAHAEFVAVEELLRQATAGTSENIGGGGNCGAVSQDLADYVLYVVVEPCIMCAAMLL 144

Query: 92  LARIRRLYYGASNPKGGGIENGTQFYT-------LATCHHSPEIYPGISEQRSRQIIQDF 144
             R+R++Y+G +NP+ GG       +                E   G   + +  ++Q F
Sbjct: 145 YNRVRKVYFGCTNPRFGGNGTVLSVHNSYKGCSGEDAAIVGYESCGGYRAEEAVVLLQQF 204

Query: 145 FKE 147
           ++ 
Sbjct: 205 YRR 207


>gi|227509717|ref|ZP_03939766.1| guanine deaminase [Lactobacillus brevis subsp. gravesensis ATCC
           27305]
 gi|227190641|gb|EEI70708.1| guanine deaminase [Lactobacillus brevis subsp. gravesensis ATCC
           27305]
          Length = 160

 Score =  134 bits (339), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 39/116 (33%), Positives = 53/116 (45%), Gaps = 1/116 (0%)

Query: 5   NVFMSCALEEAQNAALRNEI-PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
           + FMS A +EA+N     +  P GAV      I+  A N+  + +D TAHAEI AIR   
Sbjct: 7   DQFMSLAAKEAENNLRTGDGGPFGAVIANGQDILVTAHNQVLKDQDPTAHAEITAIRKAT 66

Query: 64  RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
           + L    L    LY +  PC MC  AI  + I+  YYG +      I     +   
Sbjct: 67  KKLGSYDLSGYTLYTSCYPCPMCLGAIIWSNIKVAYYGNTAKDAAKIGFRDDYIYD 122


>gi|207343953|gb|EDZ71253.1| YJL035Cp-like protein [Saccharomyces cerevisiae AWRI1631]
          Length = 250

 Score =  134 bits (339), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 36/156 (23%), Positives = 67/156 (42%), Gaps = 13/156 (8%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLN--NKIISRAGNRNRELKDVTAHAEILAIR 60
           +    M  A+  A+ A   +E PV  + V     ++++   N   +     AHAE + I 
Sbjct: 2   QHVKHMRTAVRLARYALDHDETPVACIFVHTPTGQVMAYGMNDTNKSLTGVAHAEFMGID 61

Query: 61  MGCRILSQ----EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116
               +L      ++  ++ LYVT+EPC MCA+A+    I ++ +G  N + GG       
Sbjct: 62  QIKAMLGSRGVVDVFKDITLYVTVEPCIMCASALKQLGIGKVVFGCGNERFGGNGTVLSV 121

Query: 117 YTL-----ATCHHS--PEIYPGISEQRSRQIIQDFF 145
                      + +   E  PGI  + +  +++ F+
Sbjct: 122 NHDTCTLVPKNNSAAGYESIPGILRKEAIMLLRYFY 157


>gi|224367573|ref|YP_002601736.1| putative cytidine/deoxycytidylate deaminase [Desulfobacterium
           autotrophicum HRM2]
 gi|223690289|gb|ACN13572.1| putative cytidine/deoxycytidylate deaminase [Desulfobacterium
           autotrophicum HRM2]
          Length = 181

 Score =  134 bits (339), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 39/153 (25%), Positives = 72/153 (47%), Gaps = 12/153 (7%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTA------HAEI 56
               +M  AL  AQ A  + E PVGAV V + +++++          +T       HAE+
Sbjct: 9   NDAYYMELALASAQKAFDQGEFPVGAVIVCDGRVVAQGH--RVGTGALTGRPSEIDHAEM 66

Query: 57  LAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116
            A++    +          ++ T+EPC MC +AI L+ I+++ Y   +P GGG       
Sbjct: 67  RALKELEGLPLGFDPAGAVIFSTMEPCLMCFSAIILSGIKKIVYAYEDPMGGGTC--CDL 124

Query: 117 YTLATCHHS--PEIYPGISEQRSRQIIQDFFKE 147
             L   + +   +++PG+  ++S  +   FF++
Sbjct: 125 GQLPPLYKTCGIKVFPGVLRKKSLDLFVKFFQK 157


>gi|34557713|ref|NP_907528.1| cytosine deaminase [Wolinella succinogenes DSM 1740]
 gi|34483430|emb|CAE10428.1| CYTOSINE DEAMINASE [Wolinella succinogenes]
          Length = 145

 Score =  134 bits (338), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 41/143 (28%), Positives = 66/143 (46%), Gaps = 10/143 (6%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           + F+  ALEEAQ       IP+G+V V++ KI+ R  N+  +      HAE+  +    R
Sbjct: 2   DKFLEAALEEAQKGLDEGGIPIGSVLVIDGKIVGRGHNQRVQKGSSILHAEMDCLENAGR 61

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
            LS     +  LY TL PC MC+ AI L  I +L  G +    G                
Sbjct: 62  -LSASDYRKATLYSTLSPCDMCSGAILLYGIPKLVIGENQTFRG--------PEAYVKSR 112

Query: 125 SPEIYPGISEQRSRQIIQDFFKE 147
             E+   I++ + R++++ F ++
Sbjct: 113 GVEVKV-INDPKCRELMEAFIQK 134


>gi|326330934|ref|ZP_08197234.1| guanine deaminase [Nocardioidaceae bacterium Broad-1]
 gi|325951292|gb|EGD43332.1| guanine deaminase [Nocardioidaceae bacterium Broad-1]
          Length = 159

 Score =  134 bits (338), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 31/117 (26%), Positives = 48/117 (41%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
              +++  A+  A         P GA+ + +  ++    NR     D +AHAEI+AIR  
Sbjct: 2   TDTMWLEQAVALAVRNVNNGGGPFGAIILRDGILLGTGQNRVTRDLDPSAHAEIVAIRSA 61

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
           C+      L    LY + EPC MC A    AR+ R+ Y A            + +  
Sbjct: 62  CKEADSFSLAGCTLYTSCEPCPMCLATALWARLDRVVYAADRDDAAKGGFDDRAFYD 118


>gi|170751176|ref|YP_001757436.1| CMP/dCMP deaminase zinc-binding [Methylobacterium radiotolerans JCM
           2831]
 gi|170657698|gb|ACB26753.1| CMP/dCMP deaminase zinc-binding [Methylobacterium radiotolerans JCM
           2831]
          Length = 160

 Score =  134 bits (338), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 38/145 (26%), Positives = 58/145 (40%), Gaps = 8/145 (5%)

Query: 2   KKGNVFMSCALEEAQNAAL---RNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
                FM+ A+  ++  +L      +  G V V + +II+   NR     D T H EI A
Sbjct: 3   DNHEKFMARAIALSEKTSLVDSAGGV-FGCVIVQDGEIIAEGANRVVAENDPTWHGEIEA 61

Query: 59  IRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKG---GGIENGTQ 115
           IR  C+      L    LY + EPC MC AA   A ++ +YY A        GG ++   
Sbjct: 62  IRKACKAQGSFKLRNATLYTSAEPCPMCMAAAYWAGVKNVYYAAQVEDALEYGGFDDSMI 121

Query: 116 FYTLAT-CHHSPEIYPGISEQRSRQ 139
           +  L             I  + + +
Sbjct: 122 YAELKKDVGERSIPTQQIMREEAVE 146


>gi|323304324|gb|EGA58097.1| Tad2p [Saccharomyces cerevisiae FostersB]
          Length = 242

 Score =  134 bits (338), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 36/156 (23%), Positives = 67/156 (42%), Gaps = 13/156 (8%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLN--NKIISRAGNRNRELKDVTAHAEILAIR 60
           +    M  A+  A+ A   +E PV  + V     ++++   N   +     AHAE + I 
Sbjct: 2   QHIKHMRTAVRLARYALDHDETPVACIFVHTPTGQVMAYGMNDTNKSLTGVAHAEFMGID 61

Query: 61  MGCRILSQ----EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116
               +L      ++  ++ LYVT+EPC MCA+A+    I ++ +G  N + GG       
Sbjct: 62  QIKAMLGSRGVVDVFKDITLYVTVEPCIMCASALKQLGIGKVVFGCGNERFGGNGTVLSV 121

Query: 117 YTL-----ATCHHS--PEIYPGISEQRSRQIIQDFF 145
                      + +   E  PGI  + +  +++ F+
Sbjct: 122 NHDTCTLVPKNNSAAGYESIPGILRKEAIMLLRYFY 157


>gi|225851435|ref|YP_002731669.1| riboflavin biosynthesis protein RibD [Persephonella marina EX-H1]
 gi|225645583|gb|ACO03769.1| riboflavin biosynthesis protein RibD [Persephonella marina EX-H1]
          Length = 365

 Score =  134 bits (338), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 45/162 (27%), Positives = 67/162 (41%), Gaps = 23/162 (14%)

Query: 1   MKK--GNVFMSCALEEA--QNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56
           M++    +FM  AL  A  +         VGAV V + KII +  ++   +     HAE 
Sbjct: 1   MERVNDEIFMKEALRLAELRKGLTHPNPTVGAVIVKDGKIIGKGFHKKAGM----PHAER 56

Query: 57  LAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGI 110
            AI    +      L    +YVTLEPC        C  AI   RI+R+     +P     
Sbjct: 57  EAINDAIKK--GFNLEGSTMYVTLEPCCHYGRTPPCTEAIIDRRIKRVVIATVDPNPQVS 114

Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF---KERR 149
             G +        H  E   G+ +  +R++ +DFF   KE+R
Sbjct: 115 GKGVEILKK----HGIETVVGVLQDEARKLNEDFFVYIKEKR 152


>gi|294654357|ref|XP_456407.2| DEHA2A01584p [Debaryomyces hansenii CBS767]
 gi|199428817|emb|CAG84359.2| DEHA2A01584p [Debaryomyces hansenii]
          Length = 321

 Score =  134 bits (338), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 41/152 (26%), Positives = 67/152 (44%), Gaps = 13/152 (8%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVL--NNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M+ AL     A + NE PV  + V    N+I+S   N      + T HAE +AI      
Sbjct: 11  MAIALFIGYRAMINNETPVACILVSRSTNQILSIGYNDTNRSLNGTRHAEFIAIDKVMSQ 70

Query: 66  LSQEI----------LPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
           +                +V LYVT+EPC MCA+A+    I  + YG  N + GG      
Sbjct: 71  IPVHDRSDIAKIQGFFGDVILYVTVEPCIMCASALKQIGIGYVVYGCGNDRFGGNGTILS 130

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
            +     + + + Y G+    + Q++++F+ +
Sbjct: 131 IHQDK-INKAYQSYGGVLRTEAVQLLRNFYIQ 161


>gi|255972217|ref|ZP_05422803.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis T1]
 gi|255963235|gb|EET95711.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis T1]
          Length = 102

 Score =  134 bits (338), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 39/92 (42%), Positives = 54/92 (58%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           ++   FM  A+ EA+ A    E+P+GAV V   +II R  N     ++ TAHAE+ AI+ 
Sbjct: 11  EEKEFFMREAIAEAKKAEGLAEVPIGAVIVRQGEIIGRGHNLREARQEATAHAEMYAIQE 70

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLA 93
            CR +    L E  L+VTLEPC MC+ A+ LA
Sbjct: 71  ACRGIENWRLEETQLFVTLEPCPMCSGAMLLA 102


>gi|83767797|dbj|BAE57936.1| unnamed protein product [Aspergillus oryzae]
          Length = 142

 Score =  134 bits (338), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 40/149 (26%), Positives = 68/149 (45%), Gaps = 12/149 (8%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAI 59
           M+    F+  ALEEA+       +P+GA  V  + KI+ R  N   +    T HAE+ A+
Sbjct: 1   MESDPGFV-AALEEAKQGYAEGGVPIGAALVSKDGKILGRGHNMRVQKGSATLHAEMSAL 59

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
               R+ +        +Y TL PC MC  A  L +++R+  G +    GG E        
Sbjct: 60  ENSGRLPASAY-EGATMYTTLSPCDMCTGACILYKVKRVVIGENKSFMGGEEYLK----- 113

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKER 148
              +   E+   ++ +  +Q+++ F KE+
Sbjct: 114 ---NRGKELVV-LNNEECKQLMEKFMKEK 138


>gi|229070516|ref|ZP_04203757.1| Cytosine deaminase [Bacillus cereus F65185]
 gi|228712598|gb|EEL64532.1| Cytosine deaminase [Bacillus cereus F65185]
          Length = 169

 Score =  134 bits (338), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 48/150 (32%), Positives = 73/150 (48%), Gaps = 7/150 (4%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIR 60
           ++   F+  ALEEA+ A   N  PVGAV V  NN +I+R  NR    KD+TAHAEI AIR
Sbjct: 4   ERDRYFLEMALEEAEKALKENTYPVGAVIVDGNNNVIARGRNRVHPQKDITAHAEIDAIR 63

Query: 61  MGCRILSQEILPE--VDLYVTLEPCTMCAAAISLARIRRLYYGASNP-KGGGIENGTQFY 117
                +    +      +Y TLEPC MC   I  A+I+R+ +  ++    GG +      
Sbjct: 64  NAGEAMFDAKIKNEKFTIYSTLEPCPMCTGGILFAKIQRVVWLLNDDLGFGGYKKIKNAL 123

Query: 118 TLATCHHSPEIYPGISEQ---RSRQIIQDF 144
                 +  +I     E    R +++++ +
Sbjct: 124 VFEGKFNKIDIVEEPFEDLKTRQKELMRQW 153


>gi|299134252|ref|ZP_07027445.1| CMP/dCMP deaminase zinc-binding [Afipia sp. 1NLS2]
 gi|298590999|gb|EFI51201.1| CMP/dCMP deaminase zinc-binding [Afipia sp. 1NLS2]
          Length = 154

 Score =  134 bits (338), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 37/107 (34%), Positives = 52/107 (48%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M     F+  A+E A+    +   P GAV V + K+I+   N   E  D T HAE+ AIR
Sbjct: 1   MSDAKGFLCEAIELARENVRKGGRPFGAVLVKDGKVIATGVNEILETGDPTTHAELQAIR 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKG 107
           +   +L    L    +Y +  PC MC +A+ L  IR   Y  SN +G
Sbjct: 61  VASHVLGSPRLDGCTIYASGHPCPMCLSAMHLTGIREFAYAYSNEEG 107


>gi|84497975|ref|ZP_00996772.1| putative deaminase [Janibacter sp. HTCC2649]
 gi|84381475|gb|EAP97358.1| putative deaminase [Janibacter sp. HTCC2649]
          Length = 158

 Score =  134 bits (338), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 31/99 (31%), Positives = 46/99 (46%)

Query: 1  MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
          M     ++  A++ A         P GAV V    +I    NR     D TAHAE++A+R
Sbjct: 1  MTDDQKWLDRAIDLAIANVSGGGGPFGAVVVRGGDVIGEGTNRVTLDLDPTAHAEVVALR 60

Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLY 99
            CR +    LP   +Y + EPC +C +A   AR+  + 
Sbjct: 61 NACREVGDFSLPGATVYASCEPCPLCLSASLWARVDAVV 99


>gi|323333035|gb|EGA74437.1| Tad2p [Saccharomyces cerevisiae AWRI796]
          Length = 244

 Score =  133 bits (337), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 36/151 (23%), Positives = 66/151 (43%), Gaps = 13/151 (8%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLN--NKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M  A+  A+ A   +E PV  + V     ++++   N   +     AHAE + I     +
Sbjct: 1   MRTAVRLARYALDHDETPVACIFVHTPTGQVMAYGMNDTNKSLTGVAHAEFMGIDQIKAM 60

Query: 66  LSQ----EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL-- 119
           L      ++  ++ LYVT+EPC MCA+A+    I ++ +G  N + GG            
Sbjct: 61  LGSRGVVDVFKDITLYVTVEPCIMCASALKQLGIGKVVFGCGNERFGGNGTVLSVNHDTC 120

Query: 120 ---ATCHHS--PEIYPGISEQRSRQIIQDFF 145
                 + +   E  PGI  + +  +++ F+
Sbjct: 121 TLVPKNNSAAGYESIPGILRKEAIMLLRYFY 151


>gi|113971133|ref|YP_734926.1| cytosine deaminase [Shewanella sp. MR-4]
 gi|113885817|gb|ABI39869.1| Cytosine deaminase [Shewanella sp. MR-4]
          Length = 145

 Score =  133 bits (337), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 36/144 (25%), Positives = 68/144 (47%), Gaps = 10/144 (6%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           + F+  A++EA+       IP+G+V V++ KI++R  N+  +      HAE+  +    R
Sbjct: 2   DEFLQAAIDEAKQGLAEGGIPIGSVLVIDGKIVARGHNKRVQQGSAVLHAEMDCLENAGR 61

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
           + + +   +  LY TL PC MC+ AI L  I ++  G +    G      + Y  +    
Sbjct: 62  LTAADY-QKATLYSTLSPCDMCSGAILLYGIPKVVVGENVTFQG-----PEAYVQSR--- 112

Query: 125 SPEIYPGISEQRSRQIIQDFFKER 148
             E+   +     +Q+++DF   +
Sbjct: 113 GVEVTV-VDNHECKQLMRDFIAAK 135


>gi|119486171|ref|ZP_01620231.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [Lyngbya
           sp. PCC 8106]
 gi|119456662|gb|EAW37791.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [Lyngbya
           sp. PCC 8106]
          Length = 144

 Score =  133 bits (337), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 42/145 (28%), Positives = 64/145 (44%), Gaps = 11/145 (7%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG-- 62
             +M  ALEEA+      ++P GAV V  ++I+ +  N  +   DVTAHAEI  +R    
Sbjct: 4   EDYMKIALEEAKK----GDMPYGAVLVKEDQIVVQGHNTAQRDNDVTAHAEINVLRQFTL 59

Query: 63  -CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN-GTQFYTLA 120
             +  S + L    LY T EPC MCAAA     +  + +GAS  +   + +        A
Sbjct: 60  ENKSYSIDALKGYTLYTTCEPCPMCAAACVWVGLSEIVFGASTQQLIQLGSQQIDLSCEA 119

Query: 121 TCHHSPE---IYPGISEQRSRQIIQ 142
                 +   I  GI  +    + +
Sbjct: 120 VVKKGFQDIKITQGILAEDCLALFK 144


>gi|282164705|ref|YP_003357090.1| cytosine deaminase [Methanocella paludicola SANAE]
 gi|282157019|dbj|BAI62107.1| cytosine deaminase [Methanocella paludicola SANAE]
          Length = 145

 Score =  133 bits (337), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 38/143 (26%), Positives = 67/143 (46%), Gaps = 10/143 (6%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           N FM  AL+EA+       IP+G+V V++  I+ R  NR  +      HAE+  +    R
Sbjct: 2   NEFMRAALDEAKKGLREGGIPIGSVLVVDGVIVGRGHNRRVQQGSTIKHAEMDCLESAGR 61

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
           + +     +  LY TL PC MC+ A+ L  I ++  G  N    G E   ++        
Sbjct: 62  LRAATY-RKSTLYSTLSPCDMCSGAVLLYGIPKVVIG-ENMNFKGPE---EYVRDRG--- 113

Query: 125 SPEIYPGISEQRSRQIIQDFFKE 147
             ++   +++Q   +++ DF ++
Sbjct: 114 -VDVTV-LNDQECIELMSDFIEK 134


>gi|190409464|gb|EDV12729.1| tRNA-specific adenosine deaminase 2 [Saccharomyces cerevisiae
           RM11-1a]
          Length = 250

 Score =  133 bits (337), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 36/156 (23%), Positives = 67/156 (42%), Gaps = 13/156 (8%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLN--NKIISRAGNRNRELKDVTAHAEILAIR 60
           +    M  A+  A+ A   +E PV  + V     ++++   N   +     AHAE + I 
Sbjct: 2   QHVKHMRTAVRLARYALDHDETPVACIFVHTPTGQVMAYGMNDTNKSLTGVAHAEFMGID 61

Query: 61  MGCRILSQ----EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116
               +L      ++  ++ LYVT+EPC MCA+A+    I ++ +G  N + GG       
Sbjct: 62  QIKAMLGSRGVVDVFKDITLYVTVEPCIMCASALKQLGIGKVVFGCGNERFGGNGTVLSV 121

Query: 117 YTL-----ATCHHS--PEIYPGISEQRSRQIIQDFF 145
                      + +   E  PGI  + +  +++ F+
Sbjct: 122 NHDTCTLVPKNNSAAGYESIPGILRKEAIMLLRYFY 157


>gi|92114624|ref|YP_574552.1| cytosine deaminase [Chromohalobacter salexigens DSM 3043]
 gi|91797714|gb|ABE59853.1| Cytosine deaminase [Chromohalobacter salexigens DSM 3043]
          Length = 149

 Score =  133 bits (337), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 39/144 (27%), Positives = 61/144 (42%), Gaps = 10/144 (6%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           + FM  A+EEA+       +P+G+V V   +II R  N+ ++      H E+ A+    R
Sbjct: 2   DPFMQAAIEEARKGYEAGGVPIGSVLVHRGEIIGRGHNQRQQRGSAILHGEMDALENAGR 61

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
            L   +  E  LY TL PC MC+ AI L  I  +  G +    G      +     T H 
Sbjct: 62  -LPAHVYREAVLYTTLSPCPMCSGAIVLYGIPEVVIGENTTFKGDEALLRERGVTLTIH- 119

Query: 125 SPEIYPGISEQRSRQIIQDFFKER 148
                    + + + ++  F  ER
Sbjct: 120 --------DDSQCKSLMAQFIAER 135


>gi|206968817|ref|ZP_03229772.1| cytosine deaminase [Bacillus cereus AH1134]
 gi|206735858|gb|EDZ53016.1| cytosine deaminase [Bacillus cereus AH1134]
          Length = 169

 Score =  133 bits (337), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 48/150 (32%), Positives = 73/150 (48%), Gaps = 7/150 (4%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIR 60
           ++   F+  ALEEA+ A   N  PVGAV V  NN +I+R  NR    KD+TAHAEI AIR
Sbjct: 4   ERDRYFLQMALEEAEMALKENTYPVGAVIVDGNNNVIARGRNRVHPQKDITAHAEIDAIR 63

Query: 61  MGCRILSQEILPE--VDLYVTLEPCTMCAAAISLARIRRLYYGASNP-KGGGIENGTQFY 117
                +    +      +Y TLEPC MC   I  A+I+R+ +  ++    GG +      
Sbjct: 64  NAGEAMFDAKIKNEKFTIYSTLEPCPMCTGGILFAKIQRVVWLLNDDLGFGGYKKIKNAL 123

Query: 118 TLATCHHSPEIYPGISEQ---RSRQIIQDF 144
                 +  +I     E    R +++++ +
Sbjct: 124 VFEGKFNKIDIVEEPFEDLKTRQKELMRQW 153


>gi|158334126|ref|YP_001515298.1| cytosine/adenosine deaminase [Acaryochloris marina MBIC11017]
 gi|158304367|gb|ABW25984.1| Cytosine/adenosine deaminase [Acaryochloris marina MBIC11017]
          Length = 150

 Score =  133 bits (337), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 42/144 (29%), Positives = 66/144 (45%), Gaps = 14/144 (9%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           ++FM  A++EAQ       IP+G+V V N  I+ R  N   +      HAE+ A+    R
Sbjct: 4   DLFMDAAIQEAQRGLAAGGIPIGSVVVKNGTIVGRGHNLRVQQGSAILHAEMSALETLGR 63

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
             +     +V LY TL PC+MC  AI L +I R+  G ++   G           A    
Sbjct: 64  QPAMFY-QDVTLYTTLSPCSMCTGAILLYKIPRVVIGENHTFMG---------EEALLKS 113

Query: 125 S-PEIYPGISE-QRSRQIIQDFFK 146
              ++   + +  + RQ++Q F K
Sbjct: 114 RGVKVT--VLDLPQCRQMMQAFIK 135


>gi|238486578|ref|XP_002374527.1| cytosine deaminase, putative [Aspergillus flavus NRRL3357]
 gi|317144152|ref|XP_001819938.2| cytosine deaminase [Aspergillus oryzae RIB40]
 gi|220699406|gb|EED55745.1| cytosine deaminase, putative [Aspergillus flavus NRRL3357]
          Length = 148

 Score =  133 bits (337), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 40/149 (26%), Positives = 68/149 (45%), Gaps = 12/149 (8%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAI 59
           M+    F+  ALEEA+       +P+GA  V  + KI+ R  N   +    T HAE+ A+
Sbjct: 1   MESDPGFV-AALEEAKQGYAEGGVPIGAALVSKDGKILGRGHNMRVQKGSATLHAEMSAL 59

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
               R+ +        +Y TL PC MC  A  L +++R+  G +    GG E        
Sbjct: 60  ENSGRLPASAY-EGATMYTTLSPCDMCTGACILYKVKRVVIGENKSFMGGEEYLK----- 113

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKER 148
              +   E+   ++ +  +Q+++ F KE+
Sbjct: 114 ---NRGKELVV-LNNEECKQLMEKFMKEK 138


>gi|171909718|ref|ZP_02925188.1| CMP/dCMP deaminase, zinc-binding protein [Verrucomicrobium spinosum
           DSM 4136]
          Length = 169

 Score =  133 bits (337), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 35/102 (34%), Positives = 53/102 (51%)

Query: 6   VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
            F+  A++ A         P GAV V   ++ISR  N      D TAHAE+LA+R   ++
Sbjct: 15  AFLQEAIDLAVANISEGGRPFGAVVVKYGRVISRGVNETHLSNDPTAHAEMLAVRAASQV 74

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKG 107
           L   +L    LY +  PC MC AA+ +A +  ++Y  +NP+ 
Sbjct: 75  LQSPLLESCTLYASGHPCPMCLAAMRMAGVTDVFYAFTNPEA 116


>gi|24372975|ref|NP_717017.1| cytosine deaminase [Shewanella oneidensis MR-1]
 gi|24347125|gb|AAN54462.1|AE015583_7 cytosine deaminase [Shewanella oneidensis MR-1]
          Length = 145

 Score =  133 bits (336), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 36/144 (25%), Positives = 68/144 (47%), Gaps = 10/144 (6%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           + F+  A++EA+       IP+G+V V++ KII+R  N+  +      HAE+  +    R
Sbjct: 2   DEFLQAAIDEAKQGLAEGGIPIGSVLVIDGKIIARGHNKRVQQGSAVLHAEMDCLENAGR 61

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
           + + +   +  LY TL PC MC+ AI L  I ++  G +    G      + Y  +    
Sbjct: 62  LTAADY-QKATLYSTLSPCDMCSGAILLYGIPKVVVGENVTFQG-----PEAYVQSR--- 112

Query: 125 SPEIYPGISEQRSRQIIQDFFKER 148
             ++   +     +Q+++DF   +
Sbjct: 113 GVDVTV-VDNPECKQLMRDFIAAK 135


>gi|307544360|ref|YP_003896839.1| cytosine deaminase [Halomonas elongata DSM 2581]
 gi|307216384|emb|CBV41654.1| cytosine deaminase [Halomonas elongata DSM 2581]
          Length = 152

 Score =  133 bits (336), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 44/142 (30%), Positives = 62/142 (43%), Gaps = 14/142 (9%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           + FM  AL+EA+       IP+G+V V    I+    NR  +L     H E+ A+    R
Sbjct: 2   DHFMQAALDEARAGLDEGGIPIGSVLVHRGVILGGGRNRRVQLGSTVLHGEMDALENAGR 61

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH- 123
             S +I  E  LY TL PC MC  AI L  I R+  G         EN T     A    
Sbjct: 62  -QSADIYRESTLYTTLSPCAMCTGAILLYGIPRVVIG---------ENRTFLGEEALLRS 111

Query: 124 HSPEIYPGISEQ-RSRQIIQDF 144
           H  E+   + ++     +++DF
Sbjct: 112 HGVEVE--VLQEPECIALMEDF 131


>gi|332185432|ref|ZP_08387180.1| cytidine and deoxycytidylate deaminase zinc-binding region family
           protein [Sphingomonas sp. S17]
 gi|332014410|gb|EGI56467.1| cytidine and deoxycytidylate deaminase zinc-binding region family
           protein [Sphingomonas sp. S17]
          Length = 164

 Score =  133 bits (336), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 40/148 (27%), Positives = 63/148 (42%), Gaps = 8/148 (5%)

Query: 1   MKK--GNVFMSCALEEAQ-NAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57
           M K     +M  AL+ A+   +  +  P+G V V   ++++   N+  EL D TAHAE++
Sbjct: 1   MDKATDERWMRLALQVARSKGSDPSTSPLGCVIVRGGQVLAAERNQTHELPDATAHAEMM 60

Query: 58  AIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPK-----GGGIEN 112
           AIR  C  +    L +  LY TL+PC MC  A   +++ R+ YGA               
Sbjct: 61  AIRRACESVGDLELRDATLYSTLQPCGMCTMASIWSKVGRVVYGAGREDVHPMYFEARHV 120

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQI 140
            T  +          I  G   +    +
Sbjct: 121 DTLSFIAKAYRDDIVIEGGCLAEECATL 148


>gi|156387791|ref|XP_001634386.1| predicted protein [Nematostella vectensis]
 gi|156221468|gb|EDO42323.1| predicted protein [Nematostella vectensis]
          Length = 156

 Score =  133 bits (336), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 49/158 (31%), Positives = 75/158 (47%), Gaps = 12/158 (7%)

Query: 1   MKKGNV-FMSCALEEAQNAALRN-EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           M++  V F+  A++ ++  + +   +P GAV   +NKII+   N +    D TAHAE+ A
Sbjct: 1   MEEYEVQFLERAVQLSKEGSSQGLGMPFGAVIAKDNKIIAETANLSFVNCDPTAHAEVSA 60

Query: 59  IRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
           IR  C  L    L   DLY +  PC MC AAI  A I R+YY A  PK    E   +   
Sbjct: 61  IRQACSALKSRDLTGCDLYTSCYPCAMCMAAIYWASISRVYYAA--PKVSFSERWDRLEA 118

Query: 119 --LATCHHS------PEIYPGISEQRSRQIIQDFFKER 148
             +   +        P I+     Q ++ + +++F  R
Sbjct: 119 SLIPELNKPDSEKSIPVIHVPALAQEAQLVAEEWFVRR 156


>gi|187780095|ref|ZP_02996568.1| hypothetical protein CLOSPO_03691 [Clostridium sporogenes ATCC
           15579]
 gi|187773720|gb|EDU37522.1| hypothetical protein CLOSPO_03691 [Clostridium sporogenes ATCC
           15579]
          Length = 157

 Score =  133 bits (336), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 38/113 (33%), Positives = 54/113 (47%), Gaps = 2/113 (1%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEI-PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
           M K  + M   ++        +E  P G+  V + K+I+ A N      D TAH E+ AI
Sbjct: 1   MDKNEI-MDLCVKSCMEGMKNHEGGPFGSAIVKDGKVIAVAHNTVIGDNDPTAHGEVNAI 59

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN 112
           R  C+ L+   L   +LY T EPC MC +AI  A I ++YYG +      I  
Sbjct: 60  RQACKKLNTFDLSGCELYTTSEPCPMCMSAIIWANISKVYYGCTVEDARDIGF 112


>gi|323308420|gb|EGA61665.1| Tad2p [Saccharomyces cerevisiae FostersO]
 gi|323354467|gb|EGA86306.1| Tad2p [Saccharomyces cerevisiae VL3]
          Length = 244

 Score =  133 bits (336), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 36/151 (23%), Positives = 66/151 (43%), Gaps = 13/151 (8%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLN--NKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M  A+  A+ A   +E PV  + V     ++++   N   +     AHAE + I     +
Sbjct: 1   MRTAVRLARYALDHDETPVACIFVHTPTGQVMAYGMNDTNKSLTGVAHAEFMGIDQIKAM 60

Query: 66  LSQ----EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL-- 119
           L      ++  ++ LYVT+EPC MCA+A+    I ++ +G  N + GG            
Sbjct: 61  LGSRGVVDVFKDITLYVTVEPCIMCASALKQLGIGKVVFGCGNERFGGNGTVLSVNHDTC 120

Query: 120 ---ATCHHS--PEIYPGISEQRSRQIIQDFF 145
                 + +   E  PGI  + +  +++ F+
Sbjct: 121 TLVPKNNSAAGYESIPGILRKEAIMLLRYFY 151


>gi|51245328|ref|YP_065212.1| cytidine and deoxycytidylate deaminase family protein [Desulfotalea
           psychrophila LSv54]
 gi|50876365|emb|CAG36205.1| related to cytidine and deoxycytidylate deaminase family protein
           [Desulfotalea psychrophila LSv54]
          Length = 169

 Score =  133 bits (336), Expect = 9e-30,   Method: Composition-based stats.
 Identities = 40/147 (27%), Positives = 64/147 (43%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M     FM  AL +A+ A +  E PVG V V   ++++    RN    +   HAE+ A+R
Sbjct: 1   MDVDESFMEVALAQAERALVAGEFPVGCVIVSQGEVVAVGERRNSVSANELDHAEMNALR 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
                     + ++ +Y T+EPC MC +A+ +  +R + Y   +  GGG           
Sbjct: 61  TLLAQGQPADMEKLVVYSTMEPCLMCYSALIVNGVRNIVYAYEDAMGGGTSLPLSQLAPL 120

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKE 147
                  I P +   RS ++ Q FF  
Sbjct: 121 YAGIRMNIRPHVLRARSLRLFQQFFSR 147


>gi|114048372|ref|YP_738922.1| cytosine deaminase [Shewanella sp. MR-7]
 gi|113889814|gb|ABI43865.1| Cytosine deaminase [Shewanella sp. MR-7]
          Length = 145

 Score =  133 bits (335), Expect = 9e-30,   Method: Composition-based stats.
 Identities = 36/144 (25%), Positives = 68/144 (47%), Gaps = 10/144 (6%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           + F+  A++EA+       IP+G+V V++ KI++R  N+  +      HAE+  +    R
Sbjct: 2   DEFLQAAIDEAKQGLAEGGIPIGSVLVIDGKIVARGHNKRVQQGSAVLHAEMDCLENAGR 61

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
           + + +   +  LY TL PC MC+ AI L  I ++  G +    G      + Y  +    
Sbjct: 62  LTAADY-QKATLYSTLSPCDMCSGAILLYGIPKVVVGENVTFQG-----PEAYVQSR--- 112

Query: 125 SPEIYPGISEQRSRQIIQDFFKER 148
             E+   +     +Q+++DF   +
Sbjct: 113 GVEVTV-VDNYECKQLMRDFIAAK 135


>gi|300711978|ref|YP_003737792.1| cytosine deaminase [Halalkalicoccus jeotgali B3]
 gi|299125661|gb|ADJ16000.1| cytosine deaminase [Halalkalicoccus jeotgali B3]
          Length = 280

 Score =  133 bits (335), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 38/141 (26%), Positives = 59/141 (41%), Gaps = 2/141 (1%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M +   FM  A+E A+ AA R + P G+V V + +I+    NR     D+  H E+   R
Sbjct: 136 MNE-ERFMRRAIELAREAAERGDNPFGSVLVHDGEIVMEDSNRVATEDDIRRHPELTLAR 194

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI-ENGTQFYTL 119
           +  R L  EI  E  +Y + EPC MCA  +  A   R+ Y  S P+      +       
Sbjct: 195 LAVRELDPEIRSETTMYTSTEPCPMCAGGMVYAGFDRVVYATSGPEIAAFTGHDPGVRAA 254

Query: 120 ATCHHSPEIYPGISEQRSRQI 140
                  E+      + +  +
Sbjct: 255 EILDGVTEVEGPFCHEAALAL 275


>gi|115388491|ref|XP_001211751.1| cytosine deaminase [Aspergillus terreus NIH2624]
 gi|114195835|gb|EAU37535.1| cytosine deaminase [Aspergillus terreus NIH2624]
          Length = 148

 Score =  133 bits (335), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 40/149 (26%), Positives = 66/149 (44%), Gaps = 12/149 (8%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAI 59
           M++   F+  A+EEA+  A    +P+GA  V  + KI+ R  N   +    T HAE+ A+
Sbjct: 1   MEQDPGFI-AAVEEAKKGAAEGGVPIGAALVSKDGKILGRGHNMRVQKGSATLHAEMAAL 59

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
               R+ +        +Y TL PC MC  A  L +I R+  G +    GG          
Sbjct: 60  ENSGRLPASAY-AGATMYTTLSPCDMCTGACILYKINRVVIGENQNFLGG--------EE 110

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKER 148
              +   E+   +     +Q+++ F KE+
Sbjct: 111 LLLNKGKEVVV-LDHAECKQLMETFIKEK 138


>gi|298293557|ref|YP_003695496.1| CMP/dCMP deaminase zinc-binding protein [Starkeya novella DSM 506]
 gi|296930068|gb|ADH90877.1| CMP/dCMP deaminase zinc-binding protein [Starkeya novella DSM 506]
          Length = 158

 Score =  133 bits (335), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 35/102 (34%), Positives = 47/102 (46%), Gaps = 1/102 (0%)

Query: 1   MKKGNVFMSCALEEAQ-NAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
           M     FM  A+E ++         P G V V +  I+    N      D T+H E+ AI
Sbjct: 1   MSTPEAFMRRAIEISREKMRSDGSAPFGCVIVKDGVIVGEGVNNVVNNHDATSHGEVEAI 60

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
           R   R L    L   +LY T EPC MC A++  A+I R+YY 
Sbjct: 61  RDAGRRLKSWDLSGCELYTTCEPCEMCVASMFWAKISRMYYA 102


>gi|294508554|ref|YP_003572613.1| Conserved hypothetical protein containing cytidine and
           deoxycytidylate deaminase zinc-binding protein
           [Salinibacter ruber M8]
 gi|294344883|emb|CBH25661.1| Conserved hypothetical protein containing cytidine and
           deoxycytidylate deaminase zinc-binding protein
           [Salinibacter ruber M8]
          Length = 158

 Score =  133 bits (335), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 42/145 (28%), Positives = 59/145 (40%), Gaps = 8/145 (5%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRM 61
               F+  A++EA +A      P GAV V     ++ RAGN      D T HAE   +R 
Sbjct: 9   DHERFVRAAIDEAASAQDAGNPPFGAVLVGPGGTVLDRAGNTEGRTGDCTGHAETNLVRA 68

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKG----GGIENGTQF- 116
             +    E L +  LY + EPC MCA AI  ARI R+ +G    +     G         
Sbjct: 69  ASQEYDPERLAKATLYASTEPCAMCAGAIFWARIGRVVFGLRAERLYDMKGDAGRQLALS 128

Query: 117 --YTLATCHHSPEIYPGISEQRSRQ 139
               LA  +   E+   + E  +  
Sbjct: 129 CEDVLARGNREVEVVGPVLEDEAAA 153


>gi|29654671|ref|NP_820363.1| cytidine/deoxycytidylate deaminase family protein [Coxiella
           burnetii RSA 493]
 gi|153209491|ref|ZP_01947406.1| cytidine/deoxycytidylate deaminase family protein [Coxiella
           burnetii 'MSU Goat Q177']
 gi|154706754|ref|YP_001424808.1| hypothetical protein CBUD_1461 [Coxiella burnetii Dugway 5J108-111]
 gi|161830445|ref|YP_001597217.1| cytidine/deoxycytidylate deaminase family protein [Coxiella
           burnetii RSA 331]
 gi|165923928|ref|ZP_02219760.1| cytidine/deoxycytidylate deaminase family protein [Coxiella
           burnetii RSA 334]
 gi|212212253|ref|YP_002303189.1| cytidine/deoxycytidylate deaminase family protein [Coxiella
           burnetii CbuG_Q212]
 gi|212218777|ref|YP_002305564.1| cytidine/deoxycytidylate deaminase family protein [Coxiella
           burnetii CbuK_Q154]
 gi|29541939|gb|AAO90877.1| cytidine/deoxycytidylate deaminase family protein [Coxiella
           burnetii RSA 493]
 gi|120575344|gb|EAX31968.1| cytidine/deoxycytidylate deaminase family protein [Coxiella
           burnetii 'MSU Goat Q177']
 gi|154356040|gb|ABS77502.1| hypothetical protein CBUD_1461 [Coxiella burnetii Dugway 5J108-111]
 gi|161762312|gb|ABX77954.1| cytidine/deoxycytidylate deaminase family protein [Coxiella
           burnetii RSA 331]
 gi|165916620|gb|EDR35224.1| cytidine/deoxycytidylate deaminase family protein [Coxiella
           burnetii RSA 334]
 gi|212010663|gb|ACJ18044.1| cytidine/deoxycytidylate deaminase family protein [Coxiella
           burnetii CbuG_Q212]
 gi|212013039|gb|ACJ20419.1| cytidine/deoxycytidylate deaminase family protein [Coxiella
           burnetii CbuK_Q154]
          Length = 159

 Score =  132 bits (334), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 39/151 (25%), Positives = 65/151 (43%), Gaps = 4/151 (2%)

Query: 2   KKGNVFMSCALEEAQNAALRN-EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
                F+    +  +N+   N   P GA+ V ++KII++  NR     D TAH+EI+AIR
Sbjct: 4   NNDKQFLHEVFDLVKNSISHNLGGPFGALIVRDSKIIAKGVNRVTTSNDPTAHSEIVAIR 63

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL- 119
             C+ L+   L    LYV  EPC MC  A   ARI ++ +  +      I     +Y   
Sbjct: 64  EACQKLNTFNLTGCYLYVNCEPCPMCLGACYWARIDKIIFSLTKKDAENIGFKDAYYYEQ 123

Query: 120 --ATCHHSPEIYPGISEQRSRQIIQDFFKER 148
                     +      + +  + + + K++
Sbjct: 124 IRKPLSQRDLVMVQCLREEALPLFEAWDKKK 154


>gi|146179283|ref|XP_001470903.1| conserved hypothetical protein [Tetrahymena thermophila]
 gi|146144561|gb|EDK31523.1| conserved hypothetical protein [Tetrahymena thermophila SB210]
          Length = 160

 Score =  132 bits (334), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 40/126 (31%), Positives = 60/126 (47%), Gaps = 1/126 (0%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEI-PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
           M     F+  A++EA+ A +  +  P G V V + KII RA NR     D TAHAE +AI
Sbjct: 4   MNDHQYFIQEAIKEAELAVITGDGEPFGCVIVRDGKIIVRAHNRLYIDYDPTAHAETVAI 63

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
           R+ C+     IL +  +Y + +PC MC+ AIS    + +YY     +     +    +  
Sbjct: 64  RLACKQEKSLILKDCIIYASAQPCPMCSTAISACGAKEVYYCVPGTQIQEAFSQITNFEE 123

Query: 120 ATCHHS 125
              H  
Sbjct: 124 LGLHPK 129


>gi|126653720|ref|ZP_01725638.1| cytidine/deoxycytidylate deaminase family protein; probable guanine
           deaminase [Bacillus sp. B14905]
 gi|126589684|gb|EAZ83820.1| cytidine/deoxycytidylate deaminase family protein; probable guanine
           deaminase [Bacillus sp. B14905]
          Length = 132

 Score =  132 bits (334), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 40/101 (39%), Positives = 55/101 (54%), Gaps = 2/101 (1%)

Query: 1   MKKGNVFMSCALEEA-QNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
           M +   FM  AL+ A +NA   +  P GA+ V N +IIS   N   +  D+T HAEI AI
Sbjct: 1   MNQHE-FMRKALDLANENALSEHGAPFGALVVKNGQIISSGVNEVAKTNDLTNHAEIQAI 59

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
           R  C  L    L   ++Y + EPC MC +AI  A++  +YY
Sbjct: 60  RQACHTLQTINLEGCEMYASTEPCPMCLSAIYYAKLTTVYY 100


>gi|269838046|ref|YP_003320274.1| CMP/dCMP deaminase zinc-binding protein [Sphaerobacter thermophilus
           DSM 20745]
 gi|269787309|gb|ACZ39452.1| CMP/dCMP deaminase zinc-binding protein [Sphaerobacter thermophilus
           DSM 20745]
          Length = 148

 Score =  132 bits (334), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 38/145 (26%), Positives = 55/145 (37%), Gaps = 4/145 (2%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
                +M  ALEEA  A        GAV V + ++I+   N      D TAHAE +A+R 
Sbjct: 3   DTHERYMRLALEEAAKAKAAGNGAYGAVVVRDGQVIATGRNEATTTSDPTAHAETIAVRN 62

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIE----NGTQFY 117
               L    L    LY T +PC MC  +I ++ I  +  GA             +  +  
Sbjct: 63  AGMALGTLDLSGCTLYATFQPCPMCCGSILVSGISTVVIGAVPDDPAQTRWPTYSVDRLV 122

Query: 118 TLATCHHSPEIYPGISEQRSRQIIQ 142
                     +  G+     R I+Q
Sbjct: 123 EWLGYQDRVTVITGVLADECRAILQ 147


>gi|308160868|gb|EFO63335.1| Cytosine deaminase, putative [Giardia lamblia P15]
          Length = 165

 Score =  132 bits (334), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 42/142 (29%), Positives = 71/142 (50%), Gaps = 4/142 (2%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M    +EA  A +  E+PVG   V  +  I++   N   + ++ T HAE++A+    ++ 
Sbjct: 1   MEECFKEASLALVEREVPVGCAIVDSDGHILATGRNATNKTRNSTYHAELVAL---AQLP 57

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
           S   L    LYVT+EPC MCAAA+S+  +  + Y A N K GG  +            + 
Sbjct: 58  SGINLSNCVLYVTIEPCIMCAAALSIVGLTNIIYFARNNKFGGCGSVLDVNNHIESPWTK 117

Query: 127 EIYPGISEQRSRQIIQDFFKER 148
                I ++R+  ++Q+FF+ +
Sbjct: 118 LNAKYIHDERAIYLLQEFFERK 139


>gi|192360046|ref|YP_001980851.1| cytosine deaminase [Cellvibrio japonicus Ueda107]
 gi|190686211|gb|ACE83889.1| cytosine deaminase [Cellvibrio japonicus Ueda107]
          Length = 146

 Score =  132 bits (334), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 38/148 (25%), Positives = 64/148 (43%), Gaps = 14/148 (9%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           MK  + FM  ALEEA+       IP+G+V V++ +I+ R  N+  +      HAE+  + 
Sbjct: 1   MK--DPFMQAALEEARKGRREGGIPIGSVLVIDGRIVGRGHNQRVQKGSCVLHAEMDCLE 58

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              R+ + +      LY TL PC MC+  + L  I ++           +     F    
Sbjct: 59  NAGRLKASDY-RRATLYSTLSPCDMCSGTVLLYGIPKVV----------VGENLSFQGPE 107

Query: 121 TCHHSPEIYPGISEQ-RSRQIIQDFFKE 147
               S  +   I +    +Q++QDF  +
Sbjct: 108 AYVRSRGVELDIRDDAECKQLMQDFIAQ 135


>gi|316971942|gb|EFV55655.1| guanine deaminase [Trichinella spiralis]
          Length = 161

 Score =  132 bits (334), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 30/119 (25%), Positives = 50/119 (42%), Gaps = 1/119 (0%)

Query: 2   KKGNVFMSCALEEAQNAALRNEI-PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +     +  A +EA+     ++  P GA+ V N ++++   N      D TAHAE+  IR
Sbjct: 7   ENTEALLKMACQEAERGVESDDGGPFGALVVKNGRVLAIGHNEVLLTNDPTAHAEVTVIR 66

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
                L    L   +LY + +PC MC  A   + I ++YY  S           + +  
Sbjct: 67  RAAAALGHWNLAGCELYTSCKPCPMCLGAALWSGIEKIYYSLSEEDAAAAGFRDKAFYD 125


>gi|46199478|ref|YP_005145.1| putative cell cycle protein mesJ-like protein [Thermus thermophilus
           HB27]
 gi|61217297|sp|Q72IF6|TILS_THET2 RecName: Full=tRNA(Ile)-lysidine synthase; AltName:
           Full=tRNA(Ile)-2-lysyl-cytidine synthase; AltName:
           Full=tRNA(Ile)-lysidine synthetase
 gi|46197104|gb|AAS81518.1| putative cell cycle protein mesJ-like protein [Thermus thermophilus
           HB27]
          Length = 507

 Score =  132 bits (334), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 46/131 (35%), Positives = 63/131 (48%), Gaps = 16/131 (12%)

Query: 19  ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYV 78
               E+PVGAV VL  +++ RA NR   L+D TAHAE+L +R               LYV
Sbjct: 387 FREGEVPVGAVLVLPGRVL-RAHNRVEGLRDPTAHAEMLLLREAG-----PEARGGRLYV 440

Query: 79  TLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSR 138
           TLEPC MC  A++ A +  + YGA N K G          L           G+ E+   
Sbjct: 441 TLEPCLMCHHALAQAGV-EVVYGAENLKEGA---------LTRFGLPTRARGGVRERECA 490

Query: 139 QIIQDFFKERR 149
           ++++DFF   R
Sbjct: 491 KLLRDFFARLR 501


>gi|55981511|ref|YP_144808.1| cell cycle protein MesJ [Thermus thermophilus HB8]
 gi|61217197|sp|Q5SI38|TILS_THET8 RecName: Full=tRNA(Ile)-lysidine synthase; AltName:
           Full=tRNA(Ile)-2-lysyl-cytidine synthase; AltName:
           Full=tRNA(Ile)-lysidine synthetase
 gi|55772924|dbj|BAD71365.1| probable cell cycle protein MesJ [Thermus thermophilus HB8]
          Length = 507

 Score =  132 bits (333), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 46/131 (35%), Positives = 63/131 (48%), Gaps = 16/131 (12%)

Query: 19  ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYV 78
               E+PVGAV VL  +++ RA NR   L+D TAHAE+L +R               LYV
Sbjct: 387 FREGEVPVGAVLVLPGRVL-RAHNRVEGLRDPTAHAEMLLLREAG-----PEARGGRLYV 440

Query: 79  TLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSR 138
           TLEPC MC  A++ A +  + YGA N K G          L           G+ E+   
Sbjct: 441 TLEPCLMCHHALAQAGV-EVVYGAENLKEGA---------LTRFGLPTRARGGVRERECA 490

Query: 139 QIIQDFFKERR 149
           ++++DFF   R
Sbjct: 491 KLLRDFFARLR 501


>gi|260889069|ref|ZP_05900332.1| riboflavin biosynthesis protein RibD [Leptotrichia hofstadii F0254]
 gi|260861129|gb|EEX75629.1| riboflavin biosynthesis protein RibD [Leptotrichia hofstadii F0254]
          Length = 371

 Score =  132 bits (333), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 41/153 (26%), Positives = 64/153 (41%), Gaps = 22/153 (14%)

Query: 4   GNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
              +M  A+E A+  A    +   P VGAV V   K+I    ++         HAE+ A+
Sbjct: 6   DEKYMRMAIELAKKGA--GPVNPNPMVGAVVVQGGKVIGTGYHKYFGE----PHAEVYAL 59

Query: 60  RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113
               +  + + L +  +YVTLEPC        CA  I    ++R   G+S+P       G
Sbjct: 60  DEASK--NSKDLSDATIYVTLEPCSHYGKTPPCAEKIVKLGLKRCVIGSSDPNPKVAGKG 117

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
            Q       +   E+   I ++   +I Q FFK
Sbjct: 118 IQILK----NAGIEVTENILKEECDKINQVFFK 146


>gi|262038723|ref|ZP_06012083.1| riboflavin biosynthesis protein RibD [Leptotrichia goodfellowii
           F0264]
 gi|261747275|gb|EEY34754.1| riboflavin biosynthesis protein RibD [Leptotrichia goodfellowii
           F0264]
          Length = 382

 Score =  132 bits (333), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 45/153 (29%), Positives = 63/153 (41%), Gaps = 21/153 (13%)

Query: 2   KKGNVFMSCALEEAQNAALR-NEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
           K+   +M  ALE A+    R N  P VGAV V N KII    ++        AHAE+ AI
Sbjct: 16  KEDAEYMKMALELAKKGIGRVNPNPLVGAVIVKNGKIIGEGYHKMFGE----AHAEVHAI 71

Query: 60  RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113
                           +YVTLEPC        CA  I  A I+R   G+ +P       G
Sbjct: 72  ENAGEETKN-----ATIYVTLEPCSHYGKTPPCAEKIIKAGIKRCVIGSGDPNPEVAGKG 126

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
            +       +   E+   + ++   ++ Q FFK
Sbjct: 127 IEMLK----NSGIEVTENVLKKECDELNQVFFK 155


>gi|325295467|ref|YP_004281981.1| riboflavin biosynthesis protein RibD [Desulfurobacterium
           thermolithotrophum DSM 11699]
 gi|325065915|gb|ADY73922.1| riboflavin biosynthesis protein RibD [Desulfurobacterium
           thermolithotrophum DSM 11699]
          Length = 362

 Score =  132 bits (333), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 45/160 (28%), Positives = 64/160 (40%), Gaps = 25/160 (15%)

Query: 1   MKKGNVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           M +   FM  A+ EA  A  R      VGAV V + K+I+   +    L     HAE +A
Sbjct: 1   MTQDEKFMKLAISEAYKAKGRTLPNPAVGAVIVKDGKVIATGYHERAGL----PHAESVA 56

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
           I                LYVTLEPC        C+  I  A I+R+  G  +P       
Sbjct: 57  ISKAGEKA-----KGATLYVTLEPCNHYGKTPPCSEKIIKAGIKRVVVGIRDPNPVARGG 111

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF---KERR 149
             +       +   E+  G+ E+   ++I DF    KE+R
Sbjct: 112 VEKLK-----NAGIEVKVGVLEKECFELIDDFIVNLKEKR 146


>gi|255075667|ref|XP_002501508.1| cytidine/deoxycytidylate deaminase family protein [Micromonas sp.
           RCC299]
 gi|226516772|gb|ACO62766.1| cytidine/deoxycytidylate deaminase family protein [Micromonas sp.
           RCC299]
          Length = 164

 Score =  132 bits (333), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 40/126 (31%), Positives = 59/126 (46%), Gaps = 5/126 (3%)

Query: 21  RNEIPVGAVAVL--NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEI-LPEVDLY 77
            +E+PVGAV V   + K++S   N      D TAHAE+  +R G ++L     L +  LY
Sbjct: 14  NDEVPVGAVLVHTASGKVLSSHHNTVLAQDDPTAHAEMKCVRDGAKVLGGWRYLRDATLY 73

Query: 78  VTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL--ATCHHSPEIYPGISEQ 135
           VTLEPC MCA A+  AR+  + +GA N   G   +                E+   + E 
Sbjct: 74  VTLEPCPMCAGAVLNARLGAVVWGAPNKLIGADGSWISLMGDGGDGATPGLEVRRRVLET 133

Query: 136 RSRQII 141
               ++
Sbjct: 134 ECASLM 139


>gi|254458782|ref|ZP_05072206.1| cytosine deaminase [Campylobacterales bacterium GD 1]
 gi|207084548|gb|EDZ61836.1| cytosine deaminase [Campylobacterales bacterium GD 1]
          Length = 145

 Score =  132 bits (333), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 37/143 (25%), Positives = 62/143 (43%), Gaps = 10/143 (6%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           ++F+  A++EA+       IP+G+V V++ KI+ R  NR  +      HAE+  +    R
Sbjct: 2   DIFLEEAIKEAKKGLSEGGIPIGSVLVIDGKIVGRGHNRRVQNSSAILHAEMDCLENAGR 61

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
            L         +Y TL PC MC+ AI L  I+R+  G +    G  E             
Sbjct: 62  -LKAIDYKRATIYSTLSPCDMCSGAILLYGIKRVIIGENKTFKGPEEYVKS--------R 112

Query: 125 SPEIYPGISEQRSRQIIQDFFKE 147
             E+   +  +    +++ F K 
Sbjct: 113 GIEVKV-VDNKECCNLMESFIKA 134


>gi|146295833|ref|YP_001179604.1| riboflavin biosynthesis protein RibD [Caldicellulosiruptor
           saccharolyticus DSM 8903]
 gi|145409409|gb|ABP66413.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Caldicellulosiruptor saccharolyticus DSM 8903]
          Length = 371

 Score =  132 bits (333), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 43/156 (27%), Positives = 67/156 (42%), Gaps = 20/156 (12%)

Query: 1   MK--KGNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56
           MK    + +M  ALE A+ A   +     VG+V V N  II +  ++    K    HAE+
Sbjct: 1   MKCLSHSYYMHIALELAKKASPLVLPNPRVGSVIVKNGTIIGKGYHQKYGEK----HAEV 56

Query: 57  LAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGI 110
           LAI    +      L    +YV+LEPC        C  AI  + I+++     +P     
Sbjct: 57  LAIEDAIKNGHS--LKNSTMYVSLEPCCHFGKQPPCTDAIIKSGIKKVVVATKDPNPLVN 114

Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
             G Q        H  ++  GI E+ +  + ++FFK
Sbjct: 115 GKGIQILKQ----HGIKVVEGILEKEAESVNKEFFK 146


>gi|330955311|gb|EGH55571.1| cytosine deaminase [Pseudomonas syringae Cit 7]
          Length = 145

 Score =  132 bits (333), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 39/144 (27%), Positives = 59/144 (40%), Gaps = 10/144 (6%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           + FM  A +EAQ       IP+G+V V   KII R  NR  +    T H E+ A+    R
Sbjct: 2   DAFMQAAFDEAQLGLKEGGIPIGSVIVHGGKIIGRGHNRRVQEGSATKHGEMDALENAGR 61

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
             +  +     LY TL PC MC+ AI L  IR++  G +    G                
Sbjct: 62  QPAS-VYRNSVLYTTLSPCAMCSGAILLYGIRKVIIGENESFMGE----EDLLRSRGV-- 114

Query: 125 SPEIYPGISEQRSRQIIQDFFKER 148
             ++   +     + ++Q F   +
Sbjct: 115 QIDV---LDNHDCKHMMQGFIASK 135


>gi|253743085|gb|EES99615.1| Cytosine deaminase, putative [Giardia intestinalis ATCC 50581]
          Length = 163

 Score =  132 bits (333), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 40/142 (28%), Positives = 66/142 (46%), Gaps = 4/142 (2%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M    EEA  A    E+PVG   V    +I++   N     ++   HAE++A+    ++ 
Sbjct: 1   MEECFEEANLALAEREVPVGCAIVDGSGRILATGRNATNRTRNSMCHAEMVAL---AQVP 57

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
               L    LYVT+EPC MCAAA+S+  +  + Y A N K GG  +            + 
Sbjct: 58  LDADLTGCVLYVTIEPCIMCAAALSIVGLTNVVYFARNDKFGGCGSVLDVNNHIESPWTK 117

Query: 127 EIYPGISEQRSRQIIQDFFKER 148
                +  +R+  ++Q+FF+ +
Sbjct: 118 LDAKYMPNERAVHLLQEFFERK 139


>gi|50290647|ref|XP_447756.1| hypothetical protein [Candida glabrata CBS 138]
 gi|49527067|emb|CAG60703.1| unnamed protein product [Candida glabrata]
          Length = 259

 Score =  131 bits (332), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 40/163 (24%), Positives = 73/163 (44%), Gaps = 18/163 (11%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLN--NKIISRAGNRNRELKDVTAHAEILA 58
           M K    +  AL+ A+ A    E PV  V V    + +++   N   +    TAHAE +A
Sbjct: 1   MDKYLKHIDSALKLARYALDHGETPVACVFVHEKSDSVVAYGLNDTNDSLSGTAHAEFVA 60

Query: 59  IRM---GCRILS------QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109
           +RM     +         +++  E+  YVT+EPC MCA+A+    I ++ +G  N + GG
Sbjct: 61  MRMLRDAVQAQGYASVQLKQLFKEIVCYVTVEPCIMCASALKQMGIHKIVFGCGNDRFGG 120

Query: 110 IENGTQFYTLATC-------HHSPEIYPGISEQRSRQIIQDFF 145
                  ++  +        +    + PGI  + +  +++ F+
Sbjct: 121 NGTVLSIHSDKSTTVAGSTEYDRTILVPGIRRREAIMLLRYFY 163


>gi|6322425|ref|NP_012499.1| Tad2p [Saccharomyces cerevisiae S288c]
 gi|1352970|sp|P47058|TAD2_YEAST RecName: Full=tRNA-specific adenosine deaminase subunit TAD2;
           AltName: Full=tRNA-specific adenosine-34 deaminase
           subunit TAD2
 gi|1008159|emb|CAA89326.1| unnamed protein product [Saccharomyces cerevisiae]
 gi|6434057|emb|CAB60629.1| tRNA-specific adenosine-34 deaminase subunit Tad2p/ADAT2
           [Saccharomyces cerevisiae]
 gi|51013795|gb|AAT93191.1| YJL035C [Saccharomyces cerevisiae]
 gi|151945050|gb|EDN63301.1| tRNA-specific adenosine deaminase subunit [Saccharomyces cerevisiae
           YJM789]
 gi|285812866|tpg|DAA08764.1| TPA: Tad2p [Saccharomyces cerevisiae S288c]
          Length = 250

 Score =  131 bits (332), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 36/156 (23%), Positives = 67/156 (42%), Gaps = 13/156 (8%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLN--NKIISRAGNRNRELKDVTAHAEILAIR 60
           +    M  A+  A+ A   +E PV  + V     ++++   N   +     AHAE + I 
Sbjct: 2   QHIKHMRTAVRLARYALDHDETPVACIFVHTPTGQVMAYGMNDTNKSLTGVAHAEFMGID 61

Query: 61  MGCRILSQ----EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116
               +L      ++  ++ LYVT+EPC MCA+A+    I ++ +G  N + GG       
Sbjct: 62  QIKAMLGSRGVVDVFKDITLYVTVEPCIMCASALKQLDIGKVVFGCGNERFGGNGTVLSV 121

Query: 117 YTL-----ATCHHS--PEIYPGISEQRSRQIIQDFF 145
                      + +   E  PGI  + +  +++ F+
Sbjct: 122 NHDTCTLVPKNNSAAGYESIPGILRKEAIMLLRYFY 157


>gi|332977120|gb|EGK13924.1| guanine deaminase [Desmospora sp. 8437]
          Length = 153

 Score =  131 bits (332), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 37/99 (37%), Positives = 53/99 (53%), Gaps = 2/99 (2%)

Query: 1  MKKGNVFMSCALEEA-QNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
          M + N +M  A+E A +N       P GA+ V + KI+ +  N+     D T HAE+ AI
Sbjct: 1  MDR-NHWMQTAIELAYENTRREKGRPFGAIIVKDGKIVGKGVNQILATHDPTMHAELEAI 59

Query: 60 RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98
          R   R L+   L + +LY + +PC MC AAI  A I R+
Sbjct: 60 REASRTLATSDLSDCELYASGKPCPMCLAAIYWANIHRV 98


>gi|330813628|ref|YP_004357867.1| tRNA-specific adenosine-34 deaminase [Candidatus Pelagibacter sp.
           IMCC9063]
 gi|327486723|gb|AEA81128.1| tRNA-specific adenosine-34 deaminase [Candidatus Pelagibacter sp.
           IMCC9063]
          Length = 129

 Score =  131 bits (332), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 48/128 (37%), Positives = 76/128 (59%), Gaps = 2/128 (1%)

Query: 24  IPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81
           +PV A+ V   + KII+RA N +   KD  AHAEIL IR   + L+++ L  +D+Y +LE
Sbjct: 1   MPVSAIIVDPKSKKIIARAHNLSIRNKDPLAHAEILVIRKALKFLNKKRLDGMDIYCSLE 60

Query: 82  PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141
           PC MC +AI+ +++R +Y+ A +   GG+ NG +        +    Y G  E +  +I+
Sbjct: 61  PCVMCTSAIAFSQLRNIYFCAEDKASGGLINGPKLGFSKYLKYKFSFYYGFEENKFSKIL 120

Query: 142 QDFFKERR 149
            DFFK++R
Sbjct: 121 VDFFKQKR 128


>gi|94263921|ref|ZP_01287724.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [delta
           proteobacterium MLMS-1]
 gi|94264246|ref|ZP_01288041.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [delta
           proteobacterium MLMS-1]
 gi|93455357|gb|EAT05561.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [delta
           proteobacterium MLMS-1]
 gi|93455666|gb|EAT05845.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [delta
           proteobacterium MLMS-1]
          Length = 184

 Score =  131 bits (332), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 47/163 (28%), Positives = 68/163 (41%), Gaps = 21/163 (12%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNR-------NRELKDVTA-- 52
                +M  AL+EA+ A    E PVGA+     ++++    +            D TA  
Sbjct: 3   TTDEKWMGMALDEARGALAAGEFPVGAIIAHQGQMVASGRRQHSRGAAGPVAAPDTTATE 62

Query: 53  ------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPK 106
                 HAE+LA+R             + LY TLEPC MC AA+ L  +RR+ Y   +  
Sbjct: 63  VANELDHAEMLALRQLLSRHPTADRRGLTLYATLEPCLMCYAALLLNGVRRIVYAYEDAM 122

Query: 107 GGGIENGTQFYTLATCHHS----PEIYPGISEQRSRQIIQDFF 145
           GGG   G     LA  +       EI P +  + S  + + FF
Sbjct: 123 GGG--TGLPLAELAPLYRQMAPAVEIIPHLRRRESLALFKQFF 163


>gi|268680105|ref|YP_003304536.1| cytosine deaminase [Sulfurospirillum deleyianum DSM 6946]
 gi|268618136|gb|ACZ12501.1| Cytosine deaminase [Sulfurospirillum deleyianum DSM 6946]
          Length = 146

 Score =  131 bits (332), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 39/143 (27%), Positives = 65/143 (45%), Gaps = 10/143 (6%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           + F+  A+EEAQ       IP+G+V V++ KI+ R  N+  +      HAE+  +    R
Sbjct: 3   DKFLEAAIEEAQKGLDEGGIPIGSVLVIDGKIVGRGHNQRVQKGSAILHAEMDCLENAGR 62

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
            LS        LY TL PC MC+ AI L  I +L  G +    G                
Sbjct: 63  -LSAADYRNATLYSTLSPCDMCSGAILLYGIPKLVIGENQTFRGPEAYVKSRGVD----- 116

Query: 125 SPEIYPGISEQRSRQIIQDFFKE 147
             E+   +++ + R++++ F ++
Sbjct: 117 -VEV---LNDSKCRELMEAFIEK 135


>gi|15806226|ref|NP_294931.1| cell cycle protein MesJ /cytosine deaminase-like protein
           [Deinococcus radiodurans R1]
 gi|84039866|gb|AAF10777.2|AE001969_6 cell cycle protein MesJ, putative/cytosine deaminase-related
           protein [Deinococcus radiodurans R1]
          Length = 600

 Score =  131 bits (331), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 45/128 (35%), Positives = 67/128 (52%), Gaps = 2/128 (1%)

Query: 23  EIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81
           E+PVGAV +  + +I+ R  N +RE  D+T HAE+ A+R     L    L +  L VTLE
Sbjct: 441 EVPVGAVVLNADGEIVGRGRNTSREDGDMTCHAELAALREAAAGLGTPYLSDCTLVVTLE 500

Query: 82  PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141
           PC MC  A   ARI  + YGA+NPK G +   +           P +  G+    + +++
Sbjct: 501 PCPMCLGAALEARIGHIVYGAANPKAGALGGVSDLLADHW-GWRPTVQGGVRAGEAARLL 559

Query: 142 QDFFKERR 149
           ++ F E R
Sbjct: 560 REVFGEVR 567


>gi|226330044|ref|ZP_03805562.1| hypothetical protein PROPEN_03957 [Proteus penneri ATCC 35198]
 gi|225200839|gb|EEG83193.1| hypothetical protein PROPEN_03957 [Proteus penneri ATCC 35198]
          Length = 324

 Score =  131 bits (331), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 33/99 (33%), Positives = 55/99 (55%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +   N F+  A+  A +       P GAV V N ++I+ A N+     D TAHAE+LA+R
Sbjct: 205 IMSDNQFIQQAISLAMDNVKVGGRPFGAVIVNNGQVIASAVNQIVTTNDPTAHAELLALR 264

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLY 99
              ++L +  L +  +Y + +PC MC AA+ +A I +++
Sbjct: 265 EAGKVLGRTKLDDCIVYASGQPCPMCLAAMRMAGISKIF 303


>gi|117921416|ref|YP_870608.1| CMP/dCMP deaminase, zinc-binding [Shewanella sp. ANA-3]
 gi|117613748|gb|ABK49202.1| CMP/dCMP deaminase, zinc-binding [Shewanella sp. ANA-3]
          Length = 145

 Score =  131 bits (331), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 35/144 (24%), Positives = 67/144 (46%), Gaps = 10/144 (6%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           + F+  A++EA+       IP+G+V V++ +I++R  N+  +      HAE+  +    R
Sbjct: 2   DEFLQAAIDEAKQGLAEGGIPIGSVLVIDGEIVARGHNKRVQQGSAVLHAEMDCLENAGR 61

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
           + + +   +  LY TL PC MC+ AI L  I ++  G +    G      + Y  +    
Sbjct: 62  LTAADY-QKATLYSTLSPCDMCSGAILLYGIPKVVVGENVTFQG-----PEAYVQSR--- 112

Query: 125 SPEIYPGISEQRSRQIIQDFFKER 148
             E+   +     +Q++ DF   +
Sbjct: 113 GVEVTV-VDNHECKQLMHDFIAAK 135


>gi|120599757|ref|YP_964331.1| cytosine deaminase [Shewanella sp. W3-18-1]
 gi|120559850|gb|ABM25777.1| Cytosine deaminase [Shewanella sp. W3-18-1]
          Length = 145

 Score =  131 bits (331), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 35/143 (24%), Positives = 65/143 (45%), Gaps = 10/143 (6%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           + F+  A++EA+       IP+G+V V++  I++R  N+  +      HAE+  +    R
Sbjct: 2   DEFLQAAIDEAKQGLAEGGIPIGSVLVIDGNIVARGHNKRVQQGSAVLHAEMDCLENAGR 61

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
           + + +      LY TL PC MC+ AI L  I ++  G +    G      + Y  +    
Sbjct: 62  LSAADYQKG-TLYSTLSPCDMCSGAILLYGIPKVVVGENITFQG-----PEAYVQSR--- 112

Query: 125 SPEIYPGISEQRSRQIIQDFFKE 147
             ++   +     +Q++QDF   
Sbjct: 113 GVDVTV-VDNPECKQLMQDFIAN 134


>gi|53804620|ref|YP_113769.1| cytosine deaminase [Methylococcus capsulatus str. Bath]
 gi|53758381|gb|AAU92672.1| cytosine deaminase [Methylococcus capsulatus str. Bath]
          Length = 145

 Score =  131 bits (331), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 35/145 (24%), Positives = 61/145 (42%), Gaps = 12/145 (8%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           ++++  A+ EA+       IP+G+V V++ +I+ R  NR  +      HAE+  +    R
Sbjct: 2   DIYLQAAIAEARKGLEEGGIPIGSVLVIDGEIVGRGRNRRVQKGSAILHAEMDCLENAGR 61

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
           + + E      LY TL PC MC+ AI L  I R+                 F+   T   
Sbjct: 62  LSAAEY-RRATLYSTLSPCDMCSGAILLYGIPRVV----------AGENRTFHGPETYLR 110

Query: 125 SPEIYPGISEQ-RSRQIIQDFFKER 148
           S  +   + +      +++DF    
Sbjct: 111 SRNVELLVLDDPECAALMKDFIAAH 135


>gi|300114455|ref|YP_003761030.1| CMP/dCMP deaminase zinc-binding protein [Nitrosococcus watsonii
           C-113]
 gi|299540392|gb|ADJ28709.1| CMP/dCMP deaminase zinc-binding protein [Nitrosococcus watsonii
           C-113]
          Length = 187

 Score =  131 bits (331), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 35/103 (33%), Positives = 55/103 (53%), Gaps = 1/103 (0%)

Query: 2   KKGNVFMSCALEEAQNAALRNEI-PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           ++   +M  A+E ++ A    +  P G+V     +I+    NR+   +D +AHAEI AIR
Sbjct: 34  ERATQWMRRAIELSRKAMELGDGFPFGSVIAKEGEIVGEGWNRSWVNRDPSAHAEIEAIR 93

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
             C+ L    L   D+Y + +PC MC AAI  A   R+++G S
Sbjct: 94  DACKRLDTLSLEGCDVYASAQPCPMCIAAIYWAGANRIFFGNS 136


>gi|262276797|ref|ZP_06054590.1| tRNA-specific adenosine deaminase [alpha proteobacterium HIMB114]
 gi|262223900|gb|EEY74359.1| tRNA-specific adenosine deaminase [alpha proteobacterium HIMB114]
          Length = 158

 Score =  131 bits (331), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 41/133 (30%), Positives = 74/133 (55%), Gaps = 2/133 (1%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
           N       +++  A  + E+P+ A+     NN+I+S++ N+N +  +  +HAEI++I   
Sbjct: 12  NYIFDILYQQSIKAQKKKEVPISALIFDPKNNRIVSKSHNQNIQDYNPCSHAEIISIIKA 71

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
           C  L++  L  +DLY +LEPC MC++ I  ++IRR+Y+   + K G + N  +       
Sbjct: 72  CNKLNKNRLDGMDLYCSLEPCLMCSSVIFQSKIRRVYFATDDKKNGALINNYKLGLKKNL 131

Query: 123 HHSPEIYPGISEQ 135
           +H  +IY G  E+
Sbjct: 132 NHRIDIYYGFQEE 144


>gi|61216750|sp|Q9RV23|TILS_DEIRA RecName: Full=tRNA(Ile)-lysidine synthase; AltName:
           Full=tRNA(Ile)-2-lysyl-cytidine synthase; AltName:
           Full=tRNA(Ile)-lysidine synthetase
          Length = 582

 Score =  131 bits (331), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 45/128 (35%), Positives = 67/128 (52%), Gaps = 2/128 (1%)

Query: 23  EIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81
           E+PVGAV +  + +I+ R  N +RE  D+T HAE+ A+R     L    L +  L VTLE
Sbjct: 423 EVPVGAVVLNADGEIVGRGRNTSREDGDMTCHAELAALREAAAGLGTPYLSDCTLVVTLE 482

Query: 82  PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141
           PC MC  A   ARI  + YGA+NPK G +   +           P +  G+    + +++
Sbjct: 483 PCPMCLGAALEARIGHIVYGAANPKAGALGGVSDLLADHW-GWRPTVQGGVRAGEAARLL 541

Query: 142 QDFFKERR 149
           ++ F E R
Sbjct: 542 REVFGEVR 549


>gi|148555831|ref|YP_001263413.1| CMP/dCMP deaminase, zinc-binding [Sphingomonas wittichii RW1]
 gi|148501021|gb|ABQ69275.1| CMP/dCMP deaminase, zinc-binding [Sphingomonas wittichii RW1]
          Length = 163

 Score =  131 bits (330), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 36/105 (34%), Positives = 50/105 (47%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
               F+  A+E A++   +   P GAV V +  I++   N      D TAHAE+ AIR  
Sbjct: 6   DEQRFLRAAIELARDNVAQGGRPFGAVVVKDGAIVAVGVNEILATNDPTAHAELGAIRAA 65

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKG 107
            R L    L    +Y +  PC MC AA+ +A I  + Y  SN  G
Sbjct: 66  GRRLGSPDLSGCTVYASGHPCPMCMAAMRMAGIGAVAYAYSNEDG 110


>gi|91215299|ref|ZP_01252271.1| hypothetical protein P700755_13417 [Psychroflexus torquis ATCC
           700755]
 gi|91186904|gb|EAS73275.1| hypothetical protein P700755_13417 [Psychroflexus torquis ATCC
           700755]
          Length = 149

 Score =  131 bits (330), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 42/145 (28%), Positives = 59/145 (40%), Gaps = 6/145 (4%)

Query: 1   MKK--GNVFMSCALEEAQNAALR-NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57
           MKK     FM  A+  A+           GAV V    II+   N+     D T HAE+ 
Sbjct: 1   MKKELHEKFMLKAINWAKKGKDTDGGGAFGAVIVKEGHIIAEGHNQVGSKTDCTQHAELA 60

Query: 58  AIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS--NPKGGGIENGTQ 115
            ++  CR L  + L    LY + EPC MC  A   A + +++YGAS  + K  G      
Sbjct: 61  MVQEACRKLKSKSLKGCVLYTSCEPCLMCLGATRWADLDQVFYGASADDAKEAGYIYSDL 120

Query: 116 FYTLATCHHSPEIY-PGISEQRSRQ 139
           FY   T +   E     +    +  
Sbjct: 121 FYKSNTENRHLEFKLKQMLRDEAIA 145


>gi|218506804|ref|ZP_03504682.1| cytosine deaminase protein [Rhizobium etli Brasil 5]
          Length = 98

 Score =  131 bits (330), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 59/95 (62%), Positives = 73/95 (76%)

Query: 55  EILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           EI AIR+ C  L QE L   DLYVTLEPCTMCAAAIS ARIRRLYYGA +PKGG ++NG 
Sbjct: 1   EIAAIRLACEALGQERLAGADLYVTLEPCTMCAAAISFARIRRLYYGAEDPKGGAVDNGV 60

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
           +FY   TCHH PE+Y G++E +S +I++ FF ++R
Sbjct: 61  RFYAQPTCHHVPEVYSGLNEVQSAEILRTFFSQKR 95


>gi|289208092|ref|YP_003460158.1| CMP/dCMP deaminase zinc-binding protein [Thioalkalivibrio sp.
           K90mix]
 gi|288943723|gb|ADC71422.1| CMP/dCMP deaminase zinc-binding protein [Thioalkalivibrio sp.
           K90mix]
          Length = 146

 Score =  131 bits (330), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 39/145 (26%), Positives = 64/145 (44%), Gaps = 12/145 (8%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           N F+  AL+EA+       IP+G+V     +I+ R  NR  +      HAE+ A+    R
Sbjct: 2   NPFLEAALDEARTGWDEGGIPIGSVIEHGGRIVGRGHNRRVQSGSAILHAEMDALENAGR 61

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
             +  +  E  LY TL PC MC+ AI L  I R+  G  N    G E+  +        H
Sbjct: 62  QPAS-VYRECTLYTTLSPCAMCSGAIVLYGIPRVVVG-ENATFMGEEDWLR-------SH 112

Query: 125 SPEIYPGISEQ-RSRQIIQDFFKER 148
             ++   + +    ++++  F +  
Sbjct: 113 GVQV--DVLQDAACQELMTAFIERH 135


>gi|110679616|ref|YP_682623.1| cytosine deaminase [Roseobacter denitrificans OCh 114]
 gi|109455732|gb|ABG31937.1| cytosine deaminase [Roseobacter denitrificans OCh 114]
          Length = 147

 Score =  131 bits (330), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 36/150 (24%), Positives = 62/150 (41%), Gaps = 15/150 (10%)

Query: 1   MKK-GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
           M       +  A +EA+        P+G+V     +++++  N+  +  D  AH E+ A+
Sbjct: 1   MNDVDIRMLRIAYDEAKAGFDEGGCPIGSVLARGGEVVAQGRNQRVQKGDPIAHGEMDAL 60

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
           R   R   Q+   +  LY +L PC MC   I    I R+  G  N   GG E    F   
Sbjct: 61  RKAGR---QKSYRDTTLYTSLSPCMMCTGTIIQFGIPRVVIG-ENRNFGGNE---DFLRS 113

Query: 120 ATCHHSPEIYPGISEQ-RSRQIIQDFFKER 148
                  E+   +++      ++Q F +E+
Sbjct: 114 KG----VEVI--VADDPDCIALMQRFIREK 137


>gi|30021149|ref|NP_832780.1| cytosine deaminase [Bacillus cereus ATCC 14579]
 gi|29896702|gb|AAP09981.1| Cytosine deaminase [Bacillus cereus ATCC 14579]
          Length = 169

 Score =  131 bits (330), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 47/150 (31%), Positives = 73/150 (48%), Gaps = 7/150 (4%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIR 60
           ++   F+  ALEEA+ A   N  PVGAV V  NN +I+R  NR    KD+TAHAE+ AIR
Sbjct: 4   ERDRYFLQMALEEAEKALKENTYPVGAVIVDGNNNVIARGRNRVHPEKDITAHAELDAIR 63

Query: 61  MGCRILSQEILPE--VDLYVTLEPCTMCAAAISLARIRRLYYGASNP-KGGGIENGTQFY 117
                +    +      +Y TLEPC MC   I  A+I+R+ +  ++    GG +      
Sbjct: 64  NAGEAMFDAKIKNERFTIYSTLEPCPMCTGGILFAKIQRVVWLLNDDLGFGGYKKIKNAL 123

Query: 118 TLATCHHSPEIYPGISEQ---RSRQIIQDF 144
                 +  ++     E    R R++++ +
Sbjct: 124 VFEGKFNKIDMVEEPFEDLKTRQRELMRQW 153


>gi|223938524|ref|ZP_03630416.1| Cytosine deaminase [bacterium Ellin514]
 gi|223892786|gb|EEF59255.1| Cytosine deaminase [bacterium Ellin514]
          Length = 145

 Score =  131 bits (330), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 38/144 (26%), Positives = 62/144 (43%), Gaps = 10/144 (6%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           + F+  A+EEA+       IP+G+V V   KII R  N+  +   V  HAE+  +    R
Sbjct: 2   DTFLQAAIEEAKKGLAAGGIPIGSVLVYEGKIIGRGHNQRVQHGSVIHHAEMNCLENSGR 61

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
             +  +  +  LY TL PC MC+ A  L +I  +  G +    G            +   
Sbjct: 62  QKAS-VYQKCTLYSTLSPCPMCSGAALLYKIPHVIVGENVTFQGPEAYV------RSQGV 114

Query: 125 SPEIYPGISEQRSRQIIQDFFKER 148
             EI   +  +   ++++DF   R
Sbjct: 115 KVEI---LQNEECIKLMRDFIAAR 135


>gi|25027973|ref|NP_738027.1| hypothetical protein CE1417 [Corynebacterium efficiens YS-314]
 gi|23493256|dbj|BAC18227.1| conserved hypothetical protein [Corynebacterium efficiens YS-314]
          Length = 157

 Score =  131 bits (330), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 43/151 (28%), Positives = 71/151 (47%), Gaps = 6/151 (3%)

Query: 1   MKKGNVFMSCALEEAQNAALRN-EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
           M     F+  A+E ++         P GAV    ++II+ A N     KD T HAEI+AI
Sbjct: 1   MTMNPNFLHRAVELSRRGMEAGQGGPFGAVIARGDRIIAEAYNTVLATKDPTNHAEIVAI 60

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
           R   R+L    L   +LYV  +PC MCA A+  AR+ R+Y+  +  +   I         
Sbjct: 61  RSAARVLGTVDLTGCELYVNAQPCPMCAGAVYWARLERVYFANTAAESARIGF-DDVRID 119

Query: 120 ATCHHSPEIYP----GISEQRSRQIIQDFFK 146
              + +P+        + ++R+R++  D+ +
Sbjct: 120 TELNRNPQDRGIPFEHVPDRRAREVFDDWLR 150


>gi|242802981|ref|XP_002484082.1| cytosine deaminase, putative [Talaromyces stipitatus ATCC 10500]
 gi|218717427|gb|EED16848.1| cytosine deaminase, putative [Talaromyces stipitatus ATCC 10500]
          Length = 148

 Score =  131 bits (330), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 39/150 (26%), Positives = 66/150 (44%), Gaps = 14/150 (9%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAI 59
           M+    F+  A+EEA+       +P+GA  V  + KI+ R  N   +    T H EI A+
Sbjct: 1   METDPGFI-AAVEEARQGQAEGGVPIGACLVSKDGKILGRGHNMRFQKGSATLHGEISAL 59

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
               R+ +        +Y TL PC MC  A  L +++R+  G +N   GG E        
Sbjct: 60  ENSGRLPASAY-EGATMYTTLSPCDMCTGACILYKVKRVVVGENNNFLGGEEYLKS---- 114

Query: 120 ATCHHSPEIYPGISE-QRSRQIIQDFFKER 148
                  E+   + + +   +++ DF +E+
Sbjct: 115 ----RGIEVV--VLQNEECIKLMTDFIREK 138


>gi|116491296|ref|YP_810840.1| cytosine/adenosine deaminase [Oenococcus oeni PSU-1]
 gi|290890847|ref|ZP_06553913.1| hypothetical protein AWRIB429_1303 [Oenococcus oeni AWRIB429]
 gi|116092021|gb|ABJ57175.1| Cytosine/adenosine deaminase [Oenococcus oeni PSU-1]
 gi|290479498|gb|EFD88156.1| hypothetical protein AWRIB429_1303 [Oenococcus oeni AWRIB429]
          Length = 148

 Score =  130 bits (329), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 38/111 (34%), Positives = 54/111 (48%), Gaps = 3/111 (2%)

Query: 8   MSCALEEAQN--AALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M  A+E+A           P GAV V + ++I  A N      D TAHAEI+AIR  C++
Sbjct: 1   MKLAIEQANENIVLKEGG-PFGAVIVRDQEVICAAHNMVLANLDPTAHAEIIAIRKACKV 59

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116
           L+   L +  LY +  PC MC +A   A I+ + YG +  +   I     F
Sbjct: 60  LATCDLSDCTLYTSAYPCPMCLSATIWANIKEVRYGNTPKEADRIGFRDDF 110


>gi|325958148|ref|YP_004289614.1| Cytosine deaminase [Methanobacterium sp. AL-21]
 gi|325329580|gb|ADZ08642.1| Cytosine deaminase [Methanobacterium sp. AL-21]
          Length = 157

 Score =  130 bits (329), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 38/145 (26%), Positives = 60/145 (41%), Gaps = 20/145 (13%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           +    FM  AL+EA+ +     IP+GA+ V +  I+ R  N   +      HAE+  I  
Sbjct: 8   EDDYKFMMEALKEAKKSLESGGIPIGAILVKDGVIVGRGHNNLLQKNSTILHAEMDCIEN 67

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG-----IENGTQF 116
             R+  ++      LY TL PC MC+  I L +I R+  G  N    G     IE+G + 
Sbjct: 68  SGRLKGKDY-KRSTLYTTLSPCEMCSGTIILYKISRVVIG-ENENLKGPEKCLIESGIEL 125

Query: 117 YTLATCHHSPEIYPGISEQRSRQII 141
             L                  ++++
Sbjct: 126 KNLDLP-------------ECKEML 137


>gi|297191556|ref|ZP_06908954.1| deaminase [Streptomyces pristinaespiralis ATCC 25486]
 gi|197719293|gb|EDY63201.1| deaminase [Streptomyces pristinaespiralis ATCC 25486]
          Length = 167

 Score =  130 bits (329), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 30/94 (31%), Positives = 47/94 (50%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +M  A+  A  +      P GA+ V + +I++   N+     D TAH E+ AIR GC+ L
Sbjct: 17  WMEEAIGLATASVENGGGPFGALIVKDGEIVAIGNNKVTSNLDPTAHGEVSAIRAGCQKL 76

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
               L    L  + EPC MC ++   AR+ R+ +
Sbjct: 77  GTFSLEGCVLVTSCEPCPMCLSSALWARVDRIIF 110


>gi|288818291|ref|YP_003432639.1| riboflavin biosynthesis protein [Hydrogenobacter thermophilus TK-6]
 gi|288787691|dbj|BAI69438.1| riboflavin biosynthesis protein [Hydrogenobacter thermophilus TK-6]
 gi|308751888|gb|ADO45371.1| riboflavin biosynthesis protein RibD [Hydrogenobacter thermophilus
           TK-6]
          Length = 361

 Score =  130 bits (329), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 40/152 (26%), Positives = 61/152 (40%), Gaps = 21/152 (13%)

Query: 2   KKGNVFMSCALEEA--QNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
           +  + FM  ALE A  +         VG V V + KII+   +    +     HAE +A+
Sbjct: 4   ETDHHFMRRALELAKLRKGLTHPNPTVGCVIVKDGKIIAEGYHEKVGM----PHAEAVAL 59

Query: 60  RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113
                           LYVTLEPC        C  AI  A+++R+     +P       G
Sbjct: 60  EKAGTQA-----EGSTLYVTLEPCTHYGRTPPCTDAIIRAKVKRVVIATLDPNPLVSGRG 114

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
            Q    A      ++  G+ E  +R++ +DFF
Sbjct: 115 VQKLRDAG----IDVCVGVLEDEARELNEDFF 142


>gi|297622621|ref|YP_003704055.1| CMP/dCMP deaminase zinc-binding protein [Truepera radiovictrix DSM
           17093]
 gi|297163801|gb|ADI13512.1| CMP/dCMP deaminase zinc-binding protein [Truepera radiovictrix DSM
           17093]
          Length = 153

 Score =  130 bits (329), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 42/147 (28%), Positives = 68/147 (46%), Gaps = 12/147 (8%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
             +M  A E A     R +   GAV V    +++ A N   + +D +AHAE+  IR  CR
Sbjct: 13  EAWMRLAAEVA----ERGQTMFGAVLVRGGALLAEAANTVAKDRDPSAHAELSLIRRACR 68

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIE------NGTQFYT 118
            L    L    LY T+EPC MCAAA   + +  + +GAS  +   +       +  + + 
Sbjct: 69  ELVTTDLDGCTLYTTVEPCPMCAAACVWSGVSGVVFGASIAEVAELGVPQIALSCEELFG 128

Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFF 145
                H+P +  G+  +R  ++ Q F+
Sbjct: 129 --RVQHAPTLRGGVERERCLELCQRFW 153


>gi|163735385|ref|ZP_02142819.1| cytosine deaminase [Roseobacter litoralis Och 149]
 gi|161391394|gb|EDQ15729.1| cytosine deaminase [Roseobacter litoralis Och 149]
          Length = 150

 Score =  130 bits (329), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 36/150 (24%), Positives = 61/150 (40%), Gaps = 15/150 (10%)

Query: 1   MKK-GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
           M       +  A +EA+        P+G+V     +++++  N+  +  D  AH E+ A+
Sbjct: 4   MNDADIRLLRIAYDEAKAGFDEGGCPIGSVLARGGEVVAQGRNQRVQKGDPIAHGEMDAL 63

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
           R   R   Q+   +  LY +L PC MC   I    I R+  G  N   GG E    F   
Sbjct: 64  RKAGR---QKSYRDTTLYTSLSPCMMCTGTIIQFGIPRVVIG-ENKNFGGNE---DFLRS 116

Query: 120 ATCHHSPEIYPGISEQ-RSRQIIQDFFKER 148
                  E+   +++      ++Q F  E+
Sbjct: 117 KG----VEVI--VADDPDCIDLMQRFITEK 140


>gi|116794256|gb|ABK27067.1| unknown [Picea sitchensis]
 gi|116794306|gb|ABK27088.1| unknown [Picea sitchensis]
          Length = 186

 Score =  130 bits (329), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 40/102 (39%), Positives = 59/102 (57%), Gaps = 1/102 (0%)

Query: 2   KKGNVFMSCALEEAQNAALRN-EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
            +   F+S A+EEA +        P GA+ V N+++I+   N   +  D TAHAE+ AIR
Sbjct: 29  DRDLKFLSKAVEEAYSGVNCGHGGPFGAIVVRNDEVIASCHNMVLKNMDPTAHAEVTAIR 88

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGA 102
             C  L +  L + +++ + EPC MC  AI L+RI+RL YGA
Sbjct: 89  EACNKLGRIELSDCEIFASCEPCPMCFGAIHLSRIKRLLYGA 130


>gi|323454906|gb|EGB10775.1| hypothetical protein AURANDRAFT_21935 [Aureococcus anophagefferens]
          Length = 152

 Score =  130 bits (329), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 49/144 (34%), Positives = 71/144 (49%), Gaps = 2/144 (1%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRN--RELKDVTAHAEILAIRMGCRI 65
           M  AL+EA+ AA   E+PVGAV V +      A   N     +D +AHAE+LA+R     
Sbjct: 1   MGLALDEARRAAAAGEVPVGAVVVDDATGAVVAAAGNAIEATQDASAHAELLALRRAAAA 60

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
                L    LY TLEPC +C +A    R+ R+ YGA + + G  E+      L    H+
Sbjct: 61  RGNWRLANCTLYSTLEPCVLCMSACYAFRVGRVVYGAPDHRLGAAESWLNMAELGHPFHA 120

Query: 126 PEIYPGISEQRSRQIIQDFFKERR 149
             +  G+ E  +   ++ FF+ RR
Sbjct: 121 LAVDGGVREPEAADAMRSFFRARR 144


>gi|288934196|ref|YP_003438255.1| CMP/dCMP deaminase zinc-binding protein [Klebsiella variicola
           At-22]
 gi|290508399|ref|ZP_06547770.1| cytidine/deoxycytidylate deaminase [Klebsiella sp. 1_1_55]
 gi|288888925|gb|ADC57243.1| CMP/dCMP deaminase zinc-binding protein [Klebsiella variicola
           At-22]
 gi|289777793|gb|EFD85790.1| cytidine/deoxycytidylate deaminase [Klebsiella sp. 1_1_55]
          Length = 152

 Score =  130 bits (329), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 35/107 (32%), Positives = 56/107 (52%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M   + ++  AL  A+        P GAV V +++I++ A N      D TAHAE+ A+R
Sbjct: 1   MSADDRYLQRALALAKQNIADGGRPFGAVLVRHDEIVAEAVNTFHLNGDPTAHAELNAVR 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKG 107
                L  E+L E  +Y + +PC MC +A+ L  +R +++  SN  G
Sbjct: 61  ELAARLGSEVLRECVIYASGQPCPMCLSALYLTGVREVFFANSNQDG 107


>gi|192291626|ref|YP_001992231.1| CMP/dCMP deaminase zinc-binding [Rhodopseudomonas palustris TIE-1]
 gi|192285375|gb|ACF01756.1| CMP/dCMP deaminase zinc-binding [Rhodopseudomonas palustris TIE-1]
          Length = 214

 Score =  130 bits (328), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 33/104 (31%), Positives = 53/104 (50%), Gaps = 2/104 (1%)

Query: 2   KKGNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
           ++   +M+ A+E  + A    +     GAV V + +++S  GN      D +AHAE+ AI
Sbjct: 59  EQDRRYMTQAIELMRKAGVVEKTGGAFGAVIVRDGEVLSATGNSVLRDNDPSAHAEVNAI 118

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
           R  C+ +    L    +Y + E C MC A    AR+ R++Y AS
Sbjct: 119 RAACKKVGAPNLRGATMYTSCECCPMCYATAYWARLDRIFYAAS 162


>gi|256376193|ref|YP_003099853.1| CMP/dCMP deaminase zinc-binding [Actinosynnema mirum DSM 43827]
 gi|255920496|gb|ACU36007.1| CMP/dCMP deaminase zinc-binding [Actinosynnema mirum DSM 43827]
          Length = 158

 Score =  130 bits (328), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 30/113 (26%), Positives = 50/113 (44%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           ++  +++ A         P GA+    +++++   NR     D TAHAE++AIR  CR L
Sbjct: 9   WLRRSVDLAVRNVADGGGPFGALVARGDEVVATGANRVTADLDPTAHAEVVAIRAACRAL 68

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
               L    L  + EPC +C +A   AR+ R+ Y A       +      +  
Sbjct: 69  GDFSLAGCVLVSSCEPCPLCLSAALWARVERVVYAADRHDAAAVGFDDGVFHD 121


>gi|226948555|ref|YP_002803646.1| guanine deaminase [Clostridium botulinum A2 str. Kyoto]
 gi|226842608|gb|ACO85274.1| guanine deaminase [Clostridium botulinum A2 str. Kyoto]
          Length = 157

 Score =  130 bits (328), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 36/113 (31%), Positives = 53/113 (46%), Gaps = 2/113 (1%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEI-PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
           M K  + M   ++        +E  P G+  V + ++I+ A N      D TAH E+  I
Sbjct: 1   MNKNEI-MDLCVKSCMEGMKNHEGGPFGSAIVKDGEVIAVAHNTVVGDNDPTAHGEVNVI 59

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN 112
           R  C+ L+   L   +LY T EPC MC +AI  A I ++YYG +      I  
Sbjct: 60  RKACKKLNTFDLSGCELYTTSEPCPMCMSAIIWANISKVYYGCTVEDARDIGF 112


>gi|241950789|ref|XP_002418117.1| tRNA-specific adenosine deaminase subunit, putative; tRNA-specific
           adenosine-34 deaminase subunit, putative [Candida
           dubliniensis CD36]
 gi|223641456|emb|CAX43417.1| tRNA-specific adenosine deaminase subunit, putative [Candida
           dubliniensis CD36]
          Length = 280

 Score =  130 bits (328), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 39/147 (26%), Positives = 68/147 (46%), Gaps = 3/147 (2%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAIRM 61
              +M+ +L     A L NE PV  + V   ++KIIS   N      + T HAE +A++ 
Sbjct: 8   HFQYMATSLFVGYKALLNNETPVSCIVVDSKSDKIISIGYNYTNHSLNGTQHAEFIALQR 67

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
                      ++ LYVT+EPC MCA+ +    I ++ +G  N + GG       ++  T
Sbjct: 68  FTEQKPSIGYNDLILYVTVEPCIMCASYLRQLGIGKVIFGCGNDRFGGNGTILPIHSDTT 127

Query: 122 C-HHSPEIYPGISEQRSRQIIQDFFKE 147
             + +     GI      Q++++F+ +
Sbjct: 128 LPNATYSSIGGICRTEGIQLLRNFYIQ 154


>gi|292491509|ref|YP_003526948.1| guanine deaminase [Nitrosococcus halophilus Nc4]
 gi|291580104|gb|ADE14561.1| Guanine deaminase [Nitrosococcus halophilus Nc4]
          Length = 155

 Score =  130 bits (328), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 39/107 (36%), Positives = 53/107 (49%), Gaps = 1/107 (0%)

Query: 7   FMSCALEEAQNAALRN-EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           FM+ A+  A      +   P GA+ V + +I++ A N   E  D TAHAEI AIRM C+ 
Sbjct: 5   FMAEAIRLASQGMDDDLGGPFGALIVRDGEILAHACNGVVEACDPTAHAEIQAIRMACKH 64

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN 112
           ++   L    LY + EPC MC  A   A +  +YY AS      I  
Sbjct: 65  INHFHLEGCVLYCSCEPCPMCLGAAYWAHLDGIYYAASREDAANIGF 111


>gi|237755714|ref|ZP_04584322.1| riboflavin biosynthesis protein RibD [Sulfurihydrogenibium
           yellowstonense SS-5]
 gi|237692135|gb|EEP61135.1| riboflavin biosynthesis protein RibD [Sulfurihydrogenibium
           yellowstonense SS-5]
          Length = 371

 Score =  130 bits (328), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 43/160 (26%), Positives = 63/160 (39%), Gaps = 21/160 (13%)

Query: 1   MKKGNVFMSCALEEA--QNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           +K    +M  AL+ A  +         VGAV V + KII +  +     K    HAE  A
Sbjct: 4   IKDLESYMKIALDLAKIRKGLTHPNPTVGAVIVKDGKIIGKGYH----TKAGMPHAEREA 59

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
           I+          L    ++VTLEPC        C +AI    I  +  GA +        
Sbjct: 60  IKDA--KEKGHDLKGSTMFVTLEPCCHYGRTPPCTSAIIEEGISEVVIGALDQNPIVKGQ 117

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF---KERR 149
           G          H  ++  G+ E+   +I +DFF   KE+R
Sbjct: 118 GVNILKS----HGIKVITGVLEKECEKINEDFFTYIKEKR 153


>gi|227538659|ref|ZP_03968708.1| possible cytosine deaminase [Sphingobacterium spiritivorum ATCC
           33300]
 gi|227241578|gb|EEI91593.1| possible cytosine deaminase [Sphingobacterium spiritivorum ATCC
           33300]
          Length = 94

 Score =  130 bits (328), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 34/99 (34%), Positives = 50/99 (50%), Gaps = 6/99 (6%)

Query: 51  TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI 110
           TAHAE+ A       L  + L +  LYVT+EPC MCA A    ++ R+ YGA + K G  
Sbjct: 2   TAHAEMQAFTAASSYLGGKYLKDCTLYVTVEPCVMCAGASYWTQVSRIVYGAPDEKRGAS 61

Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             G         H   EI  G+ ++   ++I  FF+++R
Sbjct: 62  RYG------KLFHPKTEIISGVLQEECAELITSFFRQKR 94


>gi|170761087|ref|YP_001786677.1| guanine deaminase [Clostridium botulinum A3 str. Loch Maree]
 gi|169408076|gb|ACA56487.1| guanine deaminase [Clostridium botulinum A3 str. Loch Maree]
          Length = 157

 Score =  130 bits (328), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 36/113 (31%), Positives = 53/113 (46%), Gaps = 2/113 (1%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEI-PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
           M K  + M   ++        +E  P G+  V + ++I+ A N      D TAH E+  I
Sbjct: 1   MDKNEI-MDLCVKSCMEGMKNHEGGPFGSAIVKDGEVIAVAHNTVIGDNDPTAHGEVNVI 59

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN 112
           R  C+ L+   L   +LY T EPC MC +AI  A I ++YYG +      I  
Sbjct: 60  RKACKKLNTFDLSGCELYTTSEPCPMCMSAIIWANISKVYYGCTVEDARDIGF 112


>gi|17555996|ref|NP_499418.1| hypothetical protein Y48A6B.7 [Caenorhabditis elegans]
 gi|3881060|emb|CAA19531.1| C. elegans protein Y48A6B.7, confirmed by transcript evidence
           [Caenorhabditis elegans]
          Length = 168

 Score =  130 bits (328), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 36/118 (30%), Positives = 52/118 (44%), Gaps = 2/118 (1%)

Query: 4   GNVFMSCALEEAQNAALRNEI-PVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRM 61
               M+ A+ EA       +  P GAV V  N K++++  N     KD T HAE+ AI+ 
Sbjct: 14  HAEHMAEAVAEACRGVECGDGGPFGAVVVDSNGKVVAKGHNMVLVTKDPTMHAEMTAIKN 73

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
            C+ L    L    LY +  PC MC      AR   +YYGA+  +   I    + +  
Sbjct: 74  ACKALGTFDLSGHILYTSCYPCPMCMGGCLWARFDAIYYGATAQQAAEIGFDDKAFHD 131


>gi|146341264|ref|YP_001206312.1| putative cytidine/deoxycytidylate deaminase [Bradyrhizobium sp.
           ORS278]
 gi|146194070|emb|CAL78088.1| putative cytidine/deoxycytidylate deaminase [Bradyrhizobium sp.
           ORS278]
          Length = 165

 Score =  130 bits (327), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 42/146 (28%), Positives = 59/146 (40%), Gaps = 6/146 (4%)

Query: 1   MKKGNVFMSCALEEA-QNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
           +K    FM  A++ A Q+ A     P+G V VL + I++   N      D TAHAEI AI
Sbjct: 4   LKTDEHFMQEAIKIATQDGADPALSPIGCVIVLGSDIVAAERNHVAAKHDATAHAEIEAI 63

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPK-----GGGIENGT 114
           R   R      L    LY TL+PC MC  A   +++ R+ YGA                T
Sbjct: 64  RAAGRGFDDGELRGATLYTTLQPCGMCTMASIWSKVGRIVYGAGRDDVHQMYFEARHVDT 123

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQI 140
             +          I  G+      ++
Sbjct: 124 LKFVENAYRDDITIEGGVLRDACSKL 149


>gi|322805608|emb|CBZ03173.1| tRNA-specific adenosine-34 deaminase [Clostridium botulinum H04402
           065]
          Length = 157

 Score =  130 bits (327), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 36/113 (31%), Positives = 53/113 (46%), Gaps = 2/113 (1%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEI-PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
           M K  + M   ++        +E  P G+  V + ++I+ A N      D TAH E+  I
Sbjct: 1   MDKNEI-MDLCVKSCMEGMKNHEGGPFGSAIVKDGEVIAVAHNTVVGDNDPTAHGEVNVI 59

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN 112
           R  C+ L+   L   +LY T EPC MC +AI  A I ++YYG +      I  
Sbjct: 60  RKACKKLNTFDLSGCELYTTSEPCPMCMSAIIWANISKVYYGCTVEDARDIGF 112


>gi|82701279|ref|YP_410845.1| cytidine/deoxycytidylate deaminase, zinc-binding region
           [Nitrosospira multiformis ATCC 25196]
 gi|82409344|gb|ABB73453.1| Cytidine/deoxycytidylate deaminase, zinc-binding region
           [Nitrosospira multiformis ATCC 25196]
          Length = 147

 Score =  130 bits (327), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 33/107 (30%), Positives = 50/107 (46%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M +   F+  A+  A+N   R   P  AV V+  + +S   N   +  D T HAE+ A+R
Sbjct: 1   MSQHETFLREAVRLAKNNRERGSRPFAAVLVVEGQAVSTGVNDVVQSNDPTTHAEMEAVR 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKG 107
              R L +  L    +Y +  PC MC AA+ +A +  +YY   N   
Sbjct: 61  AASRKLGRPDLRGSIVYASGHPCPMCLAAMVIAGVDAVYYAFDNDDA 107


>gi|149197492|ref|ZP_01874543.1| riboflavin biosynthesis protein RibD [Lentisphaera araneosa
           HTCC2155]
 gi|149139510|gb|EDM27912.1| riboflavin biosynthesis protein RibD [Lentisphaera araneosa
           HTCC2155]
          Length = 342

 Score =  130 bits (327), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 42/151 (27%), Positives = 60/151 (39%), Gaps = 16/151 (10%)

Query: 4   GNVFMSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
              +M  A++ A  A       P VGAV V + ++I+   +     K  T HAE  AI  
Sbjct: 2   HEKWMQRAIDNALKAWGHTSPNPHVGAVIVKDGEVIADGWH----KKAGTHHAEKDAITN 57

Query: 62  GCRILSQEILPEVDLYVTLEPCT------MCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
                 ++ L    +YVTLEPC        C   I  A I ++ YG ++        G  
Sbjct: 58  AKEAGREDDLYGSTIYVTLEPCCTYGRTEPCTEWIMDAGIAKVVYGCTDSNPEHAGRGFN 117

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
           +   A      EI   I E+    I + FFK
Sbjct: 118 YLLQAG----VEIEGPILEEECLAINRFFFK 144


>gi|154150488|ref|YP_001404106.1| cytosine deaminase [Candidatus Methanoregula boonei 6A8]
 gi|153999040|gb|ABS55463.1| Cytosine deaminase [Methanoregula boonei 6A8]
          Length = 177

 Score =  130 bits (327), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 35/137 (25%), Positives = 60/137 (43%), Gaps = 10/137 (7%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           +  A+ EA+       IP+G+V V++ KI+ R  NR  +      HAE+  +    R   
Sbjct: 36  LQEAILEARKGLAEGGIPIGSVLVIDGKIVGRGHNRRVQNNSAILHAEMDCLENAGRRTP 95

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
           +E      L+ TL PC MC+  + L +I R+  G  N    G E   +   +   +    
Sbjct: 96  KEY-KRATLFSTLSPCDMCSGVVLLYKIPRVVIG-ENATFKGPEEYLRSRGVKILN---- 149

Query: 128 IYPGISEQRSRQIIQDF 144
               +     +Q+++DF
Sbjct: 150 ----LDNPECKQLMKDF 162


>gi|148379269|ref|YP_001253810.1| guanine deaminase [Clostridium botulinum A str. ATCC 3502]
 gi|153931455|ref|YP_001383643.1| guanine deaminase [Clostridium botulinum A str. ATCC 19397]
 gi|153935940|ref|YP_001387192.1| guanine deaminase [Clostridium botulinum A str. Hall]
 gi|148288753|emb|CAL82837.1| guanine deaminase [Clostridium botulinum A str. ATCC 3502]
 gi|152927499|gb|ABS32999.1| guanine deaminase [Clostridium botulinum A str. ATCC 19397]
 gi|152931854|gb|ABS37353.1| guanine deaminase [Clostridium botulinum A str. Hall]
          Length = 157

 Score =  130 bits (327), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 36/113 (31%), Positives = 53/113 (46%), Gaps = 2/113 (1%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEI-PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
           M K  + M   ++        +E  P G+  V + ++I+ A N      D TAH E+  I
Sbjct: 1   MDKNEI-MDLCVKSCMEGMKNHEGGPFGSAIVKDGEVIAVAHNTVIGDNDPTAHGEVNVI 59

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN 112
           R  C+ L+   L   +LY T EPC MC +AI  A I ++YYG +      I  
Sbjct: 60  RKACKKLNTFDLSGCELYTTSEPCPMCMSAIIWANISKVYYGCTVEDARDIGF 112


>gi|296270519|ref|YP_003653151.1| cytosine deaminase [Thermobispora bispora DSM 43833]
 gi|296093306|gb|ADG89258.1| Cytosine deaminase [Thermobispora bispora DSM 43833]
          Length = 149

 Score =  130 bits (327), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 33/146 (22%), Positives = 58/146 (39%), Gaps = 12/146 (8%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
             + +M  A+E+A+       IP+GA  V + +++    NR  +      H E   +   
Sbjct: 2   SDDRYMRLAIEQARIGLSEGGIPIGAALVADGEVLGVGRNRRVQEGSAIRHGETDCLENA 61

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
            R L   +  +  LY TL PC +CA A+ L  I R+  G +           Q       
Sbjct: 62  GR-LPARVYRKSTLYTTLSPCHLCAGAVLLYGIPRVVIGENRTFTASEGLLRQ------- 113

Query: 123 HHSPEIYPGISE-QRSRQIIQDFFKE 147
            H  E+   + +     Q++++F   
Sbjct: 114 -HGVELV--VLDLDECVQMMREFIAA 136


>gi|237798885|ref|ZP_04587346.1| cytosine deaminase [Pseudomonas syringae pv. oryzae str. 1_6]
 gi|331021739|gb|EGI01796.1| cytosine deaminase [Pseudomonas syringae pv. oryzae str. 1_6]
          Length = 145

 Score =  130 bits (327), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 41/145 (28%), Positives = 63/145 (43%), Gaps = 12/145 (8%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           + FM  A EEAQ+      IP+G+V V + KII R  NR  +    T H E+ A+    R
Sbjct: 2   DAFMRAAFEEAQHGQEEGGIPIGSVIVHDGKIIGRGRNRRVQNASATLHGEMDALENAGR 61

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
             +  +  E  LY TL PC MC+ AI L  IR++  G +    G                
Sbjct: 62  QPAS-VYREAVLYTTLSPCAMCSGAILLYGIRKVIVGENQSFMGE----EDLLRSRG--- 113

Query: 125 SPEIYPGISEQ-RSRQIIQDFFKER 148
              +   + +    + ++Q+F   +
Sbjct: 114 ---VQIDVLDDAACKHMMQNFINNK 135


>gi|39935973|ref|NP_948249.1| cytidine/deoxycytidylate deaminase [Rhodopseudomonas palustris
           CGA009]
 gi|39649827|emb|CAE28349.1| Cytidine/deoxycytidylate deaminase:Tat pathway signal
           [Rhodopseudomonas palustris CGA009]
          Length = 214

 Score =  130 bits (327), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 33/104 (31%), Positives = 53/104 (50%), Gaps = 2/104 (1%)

Query: 2   KKGNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
           ++   +M+ A+E  + A    +     GAV V + +++S  GN      D +AHAE+ AI
Sbjct: 59  EQDRRYMTQAIELMRKAGVVEKTGGAFGAVIVRDGEVLSATGNSVLRDNDPSAHAEVNAI 118

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
           R  C+ +    L    +Y + E C MC A    AR+ R++Y AS
Sbjct: 119 RAACKKVGAPNLRGATMYTSCECCPMCYATAYWARLDRIFYAAS 162


>gi|297570280|ref|YP_003691624.1| Guanine deaminase [Desulfurivibrio alkaliphilus AHT2]
 gi|296926195|gb|ADH87005.1| Guanine deaminase [Desulfurivibrio alkaliphilus AHT2]
          Length = 156

 Score =  130 bits (327), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 38/111 (34%), Positives = 51/111 (45%), Gaps = 1/111 (0%)

Query: 3   KGNVFMSCALEEAQNAALRNEI-PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           +   F++  +  A     R +  P  A+ V +++II R  NR     D TAHAE+ AIR 
Sbjct: 2   EHEKFIAATIALAGETMRRGDGGPFAALVVRDHEIIGRGWNRVTSANDPTAHAEVEAIRA 61

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN 112
            C  +    L    LYV  EPC MC AA   A I ++YY A       I  
Sbjct: 62  ACAQVGDFSLAGCTLYVNCEPCPMCLAAAYWAGIEQIYYAADRHDAAAIGF 112


>gi|302835481|ref|XP_002949302.1| hypothetical protein VOLCADRAFT_89616 [Volvox carteri f.
           nagariensis]
 gi|300265604|gb|EFJ49795.1| hypothetical protein VOLCADRAFT_89616 [Volvox carteri f.
           nagariensis]
          Length = 192

 Score =  129 bits (326), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 39/79 (49%), Positives = 47/79 (59%)

Query: 24  IPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83
           +PVGAV V  ++I++R  NR   L+   AHAE+L I  G   LS   L    LY TLEPC
Sbjct: 58  VPVGAVLVHGDRILARGHNRVHRLRSPVAHAEMLCITAGASKLSSWRLLGATLYATLEPC 117

Query: 84  TMCAAAISLARIRRLYYGA 102
            MCA AI  ARI R+ YG 
Sbjct: 118 PMCAGAILQARIARVVYGC 136


>gi|296273637|ref|YP_003656268.1| cytosine deaminase [Arcobacter nitrofigilis DSM 7299]
 gi|296097811|gb|ADG93761.1| Cytosine deaminase [Arcobacter nitrofigilis DSM 7299]
          Length = 145

 Score =  129 bits (326), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 37/143 (25%), Positives = 62/143 (43%), Gaps = 10/143 (6%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           + F+  A++EA+       IP+G+V V+++KI+ R  NR  +      HAE+  +    R
Sbjct: 2   DKFLQAAIDEAKKGIDEGGIPIGSVLVIDDKIVGRGHNRRVQNGSAVLHAEMDCLENAGR 61

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
           I + +      LY TL PC MC+ A+ L  I  +  G  N    G E   ++      + 
Sbjct: 62  IKASDY-KRATLYSTLSPCDMCSGAVLLYGIPNVVIG-ENKTFKGPE---EYVKSRGVNV 116

Query: 125 SPEIYPGISEQRSRQIIQDFFKE 147
                  +  Q    ++  F K 
Sbjct: 117 KV-----MDNQECINLMGTFIKN 134


>gi|270159339|ref|ZP_06187995.1| cytosine deaminase [Legionella longbeachae D-4968]
 gi|289165841|ref|YP_003455979.1| Cytosine deaminase (Cytosine aminohydrolase) [Legionella
           longbeachae NSW150]
 gi|269987678|gb|EEZ93933.1| cytosine deaminase [Legionella longbeachae D-4968]
 gi|288859014|emb|CBJ12942.1| Cytosine deaminase (Cytosine aminohydrolase) [Legionella
           longbeachae NSW150]
          Length = 149

 Score =  129 bits (326), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 36/142 (25%), Positives = 60/142 (42%), Gaps = 10/142 (7%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
               ++  A+EEA+ +  +  IP+GAV V  ++II R  N+  +      H E+ AI   
Sbjct: 4   SHLRYLDTAIEEARRSVAQGGIPIGAVLVYKDRIIGRGHNQRVQKGSTILHGEMDAIENA 63

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
            R    ++  +  LY TL PC MC+ AI L +I  +  G +    G              
Sbjct: 64  GR-QKAKVYEQSILYTTLSPCAMCSGAILLYKIPYVVIGENQTFMGE----ETLLKSRGV 118

Query: 123 HHSPEIYPGISEQRSRQIIQDF 144
               E+   +       +++DF
Sbjct: 119 --KLEV---LQNDECITMMRDF 135


>gi|315305704|ref|ZP_07875310.1| tRNA-specific adenosine deaminase [Listeria ivanovii FSL F6-596]
 gi|313625927|gb|EFR95453.1| tRNA-specific adenosine deaminase [Listeria ivanovii FSL F6-596]
          Length = 84

 Score =  129 bits (326), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 38/80 (47%), Positives = 48/80 (60%)

Query: 6  VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           FM  ALEEA+ A    E+P+GAV VL+ KII RA N     ++   HAE+LAI+  C  
Sbjct: 5  FFMQQALEEAEKAREIGEVPIGAVVVLDGKIIGRAHNLRETSQNAVTHAELLAIQDACNY 64

Query: 66 LSQEILPEVDLYVTLEPCTM 85
           +   L   +LYVTLEPC M
Sbjct: 65 QNSWRLSGAELYVTLEPCPM 84


>gi|293335013|ref|NP_001169897.1| hypothetical protein LOC100383791 [Zea mays]
 gi|224032231|gb|ACN35191.1| unknown [Zea mays]
          Length = 180

 Score =  129 bits (326), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 36/107 (33%), Positives = 57/107 (53%), Gaps = 5/107 (4%)

Query: 10  CALEEAQNAAL--RNEIPVGAVAVL---NNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
            A++EA  A        P GAV V    +++++S + N  R+  D +AHAE+ AIR  C+
Sbjct: 28  KAVDEAYRAVECDGGGYPFGAVVVHGGGDDEVVSSSHNSVRKDADPSAHAEVTAIRQACK 87

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIE 111
            L +  L   ++Y + EPC MC   I LA+I+++ YGA +       
Sbjct: 88  KLGKTSLAGCEIYTSCEPCPMCLGLIRLAKIKKVVYGAKSEVAAAAG 134


>gi|260943466|ref|XP_002616031.1| hypothetical protein CLUG_03273 [Clavispora lusitaniae ATCC 42720]
 gi|238849680|gb|EEQ39144.1| hypothetical protein CLUG_03273 [Clavispora lusitaniae ATCC 42720]
          Length = 296

 Score =  129 bits (326), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 40/156 (25%), Positives = 68/156 (43%), Gaps = 15/156 (9%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLN--NKIISRAGNRNRELKDVTAHAEILA 58
           + +   +M+ A   A  A    E PV  V V      I++   N      + T HAE +A
Sbjct: 3   LTRHFQYMAVATFVAYRAFANGETPVACVFVHEPSQTILAFGCNDTNRSLNGTRHAEFMA 62

Query: 59  IRMGCRILS---------QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109
           I    +                 +V LYVT+EPC MCA+A+    I+++Y+GA+N + GG
Sbjct: 63  IDKILQENHLLNSSPEKVAAFFSQVVLYVTVEPCVMCASALRHVGIKKVYFGAANDRFGG 122

Query: 110 IENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
                +       + S   + GI    +  ++++F+
Sbjct: 123 NGTVIKVQE----NDSYLSFGGIMRVEAVHLLRNFY 154


>gi|256271071|gb|EEU06172.1| Tad2p [Saccharomyces cerevisiae JAY291]
          Length = 250

 Score =  129 bits (326), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 35/156 (22%), Positives = 66/156 (42%), Gaps = 13/156 (8%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVA--VLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +    M  A+  A+ A   +E PV  +       ++++   N   +     AHAE + I 
Sbjct: 2   QHVKHMRTAVRLARYALDHDETPVACIFEHTPTGQVMAYGMNDTNKSLTGVAHAEFMGID 61

Query: 61  MGCRILSQ----EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116
               +L      ++  ++ LYVT+EPC MCA+A+    I ++ +G  N + GG       
Sbjct: 62  QIKAMLGSRGVVDVFKDITLYVTVEPCIMCASALKQLGIGKVVFGCGNERFGGNGTVLSV 121

Query: 117 YTL-----ATCHHS--PEIYPGISEQRSRQIIQDFF 145
                      + +   E  PGI  + +  +++ F+
Sbjct: 122 NHDTCTLVPKNNSAAGYESIPGILRKEAIMLLRYFY 157


>gi|259506366|ref|ZP_05749268.1| guanine deaminase [Corynebacterium efficiens YS-314]
 gi|259166044|gb|EEW50598.1| guanine deaminase [Corynebacterium efficiens YS-314]
          Length = 155

 Score =  129 bits (326), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 42/145 (28%), Positives = 70/145 (48%), Gaps = 6/145 (4%)

Query: 7   FMSCALEEAQNAALRN-EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           F+  A+E ++         P GAV    ++II+ A N     KD T HAEI+AIR   R+
Sbjct: 5   FLHRAVELSRRGMEAGQGGPFGAVIARGDRIIAEAYNTVLATKDPTNHAEIVAIRSAARV 64

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           L    L   +LYV  +PC MCA A+  AR+ R+Y+  +  +   I            + +
Sbjct: 65  LGTVDLTGCELYVNAQPCPMCAGAVYWARLERVYFANTAAESARIGF-DDVRIDTELNRN 123

Query: 126 PEIYP----GISEQRSRQIIQDFFK 146
           P+        + ++R+R++  D+ +
Sbjct: 124 PQDRGIPFEHVPDRRAREVFDDWLR 148


>gi|225874834|ref|YP_002756293.1| guanine deaminase [Acidobacterium capsulatum ATCC 51196]
 gi|225793201|gb|ACO33291.1| guanine deaminase [Acidobacterium capsulatum ATCC 51196]
          Length = 162

 Score =  129 bits (326), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 35/100 (35%), Positives = 48/100 (48%), Gaps = 1/100 (1%)

Query: 2   KKGNVFMSCALEEAQNAALRN-EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +    F+  A+  A          P GAV V  +K+++ A N      D TAHAE+ AIR
Sbjct: 7   QTHATFLRRAIALALENVQAGKGGPFGAVIVREDKVVAEAANSVFTTNDPTAHAEVNAIR 66

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
             CR L    L    +Y + EPC MC AA   A + R+Y+
Sbjct: 67  AACRNLGVFELRGCVIYTSSEPCPMCLAACYWAHLDRIYF 106


>gi|168185037|ref|ZP_02619701.1| guanine deaminase [Clostridium botulinum Bf]
 gi|237794579|ref|YP_002862131.1| guanine deaminase [Clostridium botulinum Ba4 str. 657]
 gi|182671910|gb|EDT83871.1| guanine deaminase [Clostridium botulinum Bf]
 gi|229262002|gb|ACQ53035.1| guanine deaminase [Clostridium botulinum Ba4 str. 657]
          Length = 157

 Score =  129 bits (325), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 37/113 (32%), Positives = 53/113 (46%), Gaps = 2/113 (1%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEI-PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
           M K  + M   ++        +E  P G+  V + ++I+ A N      D TAH E+  I
Sbjct: 1   MDKNEI-MDLCVKSCMEGMKNHEGGPFGSAIVKDGEVIAVAHNTVVGDNDPTAHGEVNVI 59

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN 112
           R  C+ LS   L   +LY T EPC MC +AI  A I ++YYG +      I  
Sbjct: 60  RKACKKLSTFDLSGCELYTTSEPCPMCMSAIIWANISKVYYGCTVEDARDIGF 112


>gi|227824209|ref|YP_002828182.1| CMP/dCMP deaminase, zinc-binding [Sinorhizobium fredii NGR234]
 gi|227343211|gb|ACP27429.1| CMP/dCMP deaminase, zinc-binding [Sinorhizobium fredii NGR234]
          Length = 171

 Score =  129 bits (325), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 34/107 (31%), Positives = 55/107 (51%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M++   F+  A+  A+    +   P GAV V N ++I R  N   +  D T+HAE+ A+R
Sbjct: 19  MQEEERFLREAVSLARTNLEKGGRPFGAVVVRNGEVIGRGVNEMLDTGDPTSHAELNAVR 78

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKG 107
              + ++   L +  +Y +  PC MC AA+ +A I  + Y  SN  G
Sbjct: 79  AAAKTIASLRLEDATVYASGHPCPMCLAAMRMAGITEIAYAHSNEDG 125


>gi|124486136|ref|YP_001030752.1| hypothetical protein Mlab_1318 [Methanocorpusculum labreanum Z]
 gi|124363677|gb|ABN07485.1| CMP/dCMP deaminase, zinc-binding protein [Methanocorpusculum
           labreanum Z]
          Length = 151

 Score =  129 bits (325), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 39/146 (26%), Positives = 62/146 (42%), Gaps = 10/146 (6%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           +  + +M  A EEA        IP+GAV V N +I+ R  N+  +  +   H E+ A+  
Sbjct: 3   ESMDQYMRAAYEEALAGRNEGGIPIGAVLVRNGEIVGRGHNQRVQKGNPILHGEMDALSN 62

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
             R  +     E  LY TL PC MC+ AI L +I  +  G      G     T F     
Sbjct: 63  SGRHPASFY-KECTLYTTLAPCIMCSGAILLYKIPEVVVGEDVNYPGE----TAFLRSRG 117

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKE 147
                 I   ++ +   ++++ F +E
Sbjct: 118 V--KVTI---LNNEEIIRMMKTFIEE 138


>gi|46447463|ref|YP_008828.1| hypothetical protein pc1829 [Candidatus Protochlamydia amoebophila
           UWE25]
 gi|46401104|emb|CAF24553.1| conserved hypothetical protein [Candidatus Protochlamydia
           amoebophila UWE25]
          Length = 156

 Score =  129 bits (325), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 38/118 (32%), Positives = 52/118 (44%), Gaps = 2/118 (1%)

Query: 7   FMSCALEEAQNAALRNEI-PVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           +M  A+E A     ++E  P GA  V    +I++   N   + +D T HAE+  IR   R
Sbjct: 4   YMRRAIESAYEGIDKDEGGPFGACIVDKQGQILAVTHNTVLKDQDPTCHAEMNCIREAAR 63

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
            L   IL    L+ T EPC MC AAI  ARI ++Y G              F+     
Sbjct: 64  RLKTHILSGYTLFTTAEPCPMCLAAIYWARIEKVYIGVKKECAARYGFDDAFFYEQLL 121


>gi|149236051|ref|XP_001523903.1| cytosine deaminase [Lodderomyces elongisporus NRRL YB-4239]
 gi|146452279|gb|EDK46535.1| cytosine deaminase [Lodderomyces elongisporus NRRL YB-4239]
          Length = 160

 Score =  129 bits (325), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 36/152 (23%), Positives = 63/152 (41%), Gaps = 21/152 (13%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVG-AVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
                M+ ALE+AQ +     IP+G  +   + +++ R  N+  +      H E+  +  
Sbjct: 14  DDKKGMAIALEQAQISYNEGGIPIGGCLIHKDGRVLGRGYNKRVQNGSPILHGEMSVLEN 73

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIE----NGTQFY 117
             R+    I  +  +Y TL PC MC  AI L  I+R+  G ++   GG E    NG +  
Sbjct: 74  AGRLPHS-IYKDCTMYTTLSPCNMCTGAILLYGIKRVVMGENDTFVGGEELLKQNGVELV 132

Query: 118 TLATCHHSPEIYPGISEQR-SRQIIQDFFKER 148
                           +    ++I+  F +E+
Sbjct: 133 N--------------LQDEGCKEILTKFIQEK 150


>gi|210076069|ref|XP_505753.2| YALI0F22517p [Yarrowia lipolytica]
 gi|199424977|emb|CAG78564.2| YALI0F22517p [Yarrowia lipolytica]
          Length = 150

 Score =  129 bits (325), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 33/143 (23%), Positives = 64/143 (44%), Gaps = 11/143 (7%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRM 61
               +M+ A+E+A  +     IP+GAV V  +  ++ +  NR  +      H EI A++ 
Sbjct: 4   DDAKYMAMAIEQATKSKNEGGIPIGAVLVAGDGTVLGKGHNRRIQHGSAVHHGEIDALQN 63

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
             R L+ ++  +  +Y TL PC MC  A  +  ++R+  G ++   GG      +     
Sbjct: 64  AGR-LAGKVYKDATMYTTLSPCDMCTGACIMFGVKRVVMGENDTFVGG----DDYLRARG 118

Query: 122 CHHSPEIYPGISEQRSRQIIQDF 144
                E+   +     +Q++ +F
Sbjct: 119 ----IEVV-NLKNDECKQLMDEF 136


>gi|78777832|ref|YP_394147.1| cytosine deaminase [Sulfurimonas denitrificans DSM 1251]
 gi|78498372|gb|ABB44912.1| Cytosine deaminase [Sulfurimonas denitrificans DSM 1251]
          Length = 145

 Score =  129 bits (325), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 40/143 (27%), Positives = 67/143 (46%), Gaps = 10/143 (6%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           + F+  A+EEA+       IP+G+V V++ KI+ R  NR  +      HAE+  +    R
Sbjct: 2   DKFLQAAIEEAKKGLKEGGIPIGSVLVIDGKIVGRGHNRRVQDSSAILHAEMDCLENAGR 61

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
           + + E   +  LY TL PC+MC+ A  L +I ++  G +    G  E         +C  
Sbjct: 62  MAASEY-KKAILYSTLSPCSMCSGAALLYKIPKIIIGENRTFKGPEEYV------RSCGV 114

Query: 125 SPEIYPGISEQRSRQIIQDFFKE 147
             EI   +  Q    ++Q F ++
Sbjct: 115 EVEI---LDNQECFDMMQSFIQK 134


>gi|146292307|ref|YP_001182731.1| cytosine deaminase [Shewanella putrefaciens CN-32]
 gi|145563997|gb|ABP74932.1| Cytosine deaminase [Shewanella putrefaciens CN-32]
          Length = 145

 Score =  129 bits (325), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 35/143 (24%), Positives = 65/143 (45%), Gaps = 10/143 (6%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           + F+  A++EA+       IP+G+V V++ KI++R  N+  +      HAE+  +    R
Sbjct: 2   DEFLQAAIDEAKQGLAEGGIPIGSVLVIDGKIVARGHNKRVQQGSAVLHAEMDCLENAGR 61

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
           + + +      LY TL PC MC+ AI L  I ++  G +    G      + Y  +    
Sbjct: 62  LSAADYQKG-TLYSTLSPCDMCSGAILLYGIPKVVVGENITFQG-----PEAYVQSR--- 112

Query: 125 SPEIYPGISEQRSRQIIQDFFKE 147
             ++   +     +Q++ DF   
Sbjct: 113 GVDVTV-VDNPECKQLMLDFIAN 134


>gi|300786467|ref|YP_003766758.1| deaminase [Amycolatopsis mediterranei U32]
 gi|299795981|gb|ADJ46356.1| deaminase [Amycolatopsis mediterranei U32]
          Length = 160

 Score =  129 bits (325), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 31/96 (32%), Positives = 47/96 (48%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
             ++  A+  A         P GA+ V + KI+S   NR     D TAHAE++AIR  C+
Sbjct: 9   QAWLDEAVRIATRNVENGGGPFGALIVRDGKIVSTGVNRVTANLDPTAHAEVVAIRAACQ 68

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
            L    L    L  + EPC MC ++   AR+ ++ +
Sbjct: 69  ELGTFKLDGCVLVSSCEPCPMCLSSALWARVDKVLF 104


>gi|238881956|gb|EEQ45594.1| conserved hypothetical protein [Candida albicans WO-1]
          Length = 270

 Score =  129 bits (325), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 40/143 (27%), Positives = 70/143 (48%), Gaps = 3/143 (2%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M+ +L     A L NE PV  + V   ++KIIS   N      + T HAE +A++     
Sbjct: 1   MAISLFVGYKALLNNETPVSCIVVDSKSDKIISIGYNYTNHSLNGTQHAEFIALQRFGEQ 60

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC-HH 124
            S     ++ LYVT+EPC MCA+ +    I+++ +G  N + GG       ++  T  + 
Sbjct: 61  KSSIDYNDLILYVTVEPCIMCASYLRQLGIKKVIFGCGNDRFGGNGTILPIHSDITLPNA 120

Query: 125 SPEIYPGISEQRSRQIIQDFFKE 147
           +     GI   +  Q++++F+ +
Sbjct: 121 TYSSIGGICRTKGIQLLRNFYIQ 143


>gi|284040576|ref|YP_003390506.1| cytosine deaminase [Spirosoma linguale DSM 74]
 gi|283819869|gb|ADB41707.1| Cytosine deaminase [Spirosoma linguale DSM 74]
          Length = 144

 Score =  129 bits (325), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 33/144 (22%), Positives = 59/144 (40%), Gaps = 12/144 (8%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           + FM  A+ +A+ +     IP+G+  V N ++++   N+  +  +   H E+  +    R
Sbjct: 2   DEFMQEAINQARKSLSEGGIPIGSSLVKNGELVASGHNKRVQENNPILHGEMDCLNNAGR 61

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
           + S        +Y TL PC MCA  I   +I ++  G S    G  E   Q        H
Sbjct: 62  VGS---FRNTVIYSTLMPCYMCAGTIVQFKIPKVIVGESRTFLGAREFMEQ--------H 110

Query: 125 SPEIYPGISEQRSRQIIQDFFKER 148
             E+   +       ++  F  E+
Sbjct: 111 GVEVID-LDLPECVDMMNQFIAEK 133


>gi|38677840|emb|CAE82258.1| putative cytosine deaminase [Candida albicans]
          Length = 150

 Score =  129 bits (325), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 31/147 (21%), Positives = 60/147 (40%), Gaps = 11/147 (7%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVG-AVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
                +  AL++A+ +     IP+G  +   +  ++ +  N   +      H E+ A+  
Sbjct: 4   DDKKGLQIALDQAKKSYSEGGIPIGSCIISSDGTVLGQGHNERIQKHSAILHGEMSALEN 63

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
             R+  +    +  +Y TL PC+MC  AI L   +R+  G  N    G E          
Sbjct: 64  AGRLPGKTY-KDCTIYTTLSPCSMCTGAILLYGFKRVVMG-ENVNFLGNEKLL------- 114

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKER 148
             +  E+   +++Q    ++  F KE+
Sbjct: 115 IENGVEVV-NLNDQECIDLMAKFIKEK 140


>gi|33595634|ref|NP_883277.1| hypothetical protein BPP0953 [Bordetella parapertussis 12822]
 gi|33600148|ref|NP_887708.1| hypothetical protein BB1162 [Bordetella bronchiseptica RB50]
 gi|33565712|emb|CAE40360.1| conserved hypothetical protein [Bordetella parapertussis]
 gi|33567746|emb|CAE31660.1| conserved hypothetical protein [Bordetella bronchiseptica RB50]
          Length = 169

 Score =  129 bits (325), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 32/105 (30%), Positives = 51/105 (48%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
             +  +  A+  A+  A     P GA+   +  +++R  NR     D TAHAE+LA+R  
Sbjct: 15  DDDALLREAIALARANARAGGRPFGALVAKDGVVLARGVNRMLADHDPTAHAELLALREA 74

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKG 107
            R L    L    +Y + +PC MC AA+ ++ + R  Y  SN + 
Sbjct: 75  GRALRSARLDGCVVYASGQPCPMCLAAMRMSGVARAVYAYSNEQA 119


>gi|254577709|ref|XP_002494841.1| ZYRO0A10890p [Zygosaccharomyces rouxii]
 gi|238937730|emb|CAR25908.1| ZYRO0A10890p [Zygosaccharomyces rouxii]
          Length = 248

 Score =  128 bits (324), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 39/149 (26%), Positives = 65/149 (43%), Gaps = 7/149 (4%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVL--NNKIISRAGNRNRELKDVTAHAEILAIRM 61
               M  AL   + A    E PV  + V    ++I++   N         AHAE + I  
Sbjct: 7   HLRHMETALRLGRYALDHGETPVACIFVHIPTDQIVAFGMNDTNRSLTGVAHAEFMGIEQ 66

Query: 62  GCRILSQEILP----EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFY 117
               +S + L     ++ LYVT+EPC MCA+A+    I ++ +GA N + GG        
Sbjct: 67  IREFVSPDELVPFFGDIALYVTVEPCIMCASALKQLGIGKVIFGAGNDRFGGNGTVLSIN 126

Query: 118 TLA-TCHHSPEIYPGISEQRSRQIIQDFF 145
             + T     E  PG+  + +  +++ F+
Sbjct: 127 QDSCTLGGKHESIPGVLRREAIMLLRYFY 155


>gi|329964682|ref|ZP_08301736.1| riboflavin biosynthesis protein RibD [Bacteroides fluxus YIT 12057]
 gi|328525082|gb|EGF52134.1| riboflavin biosynthesis protein RibD [Bacteroides fluxus YIT 12057]
          Length = 349

 Score =  128 bits (324), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 42/152 (27%), Positives = 62/152 (40%), Gaps = 19/152 (12%)

Query: 1   MKKGNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           M     +M   ++ AQN          VGAV V + KII    +         AHAE+ A
Sbjct: 1   MNTEEKYMRRCIQLAQNGLCNAAPNPMVGAVIVCDGKIIGEGYHIRCGE----AHAEVNA 56

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
           IR    +    +L +  +YV+LEPC        CA  I   +I R+  G  +P       
Sbjct: 57  IRS---VKEPALLKKSTIYVSLEPCSHYGKTPPCADLIIEKQIPRIVIGCRDPFSKVAGR 113

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
           G Q    A      E+  G+ E+  + +I+ F
Sbjct: 114 GIQKLKDAGR----EVIVGVLEEECKSLIRRF 141


>gi|290771180|emb|CAY80744.2| Tad2p [Saccharomyces cerevisiae EC1118]
          Length = 250

 Score =  128 bits (324), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 35/156 (22%), Positives = 66/156 (42%), Gaps = 13/156 (8%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVA--VLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +    M  A+  A+ A   +E PV  +       ++++   N   +     AHAE + I 
Sbjct: 2   QHVKHMRTAVRLARYALDHDETPVACIFEHTPTGQVMAYGMNDTNKSLTGVAHAEFMGID 61

Query: 61  MGCRILSQ----EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116
               +L      ++  ++ LYVT+EPC MCA+A+    I ++ +G  N + GG       
Sbjct: 62  QIKAMLGSRGVVDVFKDITLYVTVEPCIMCASALKQLGIGKVVFGCGNERFGGNGTVLSV 121

Query: 117 YTL-----ATCHHS--PEIYPGISEQRSRQIIQDFF 145
                      + +   E  PGI  + +  +++ F+
Sbjct: 122 NHDTCTLVPKNNSAAGYESIPGILRKEAIMLLRYFY 157


>gi|94496883|ref|ZP_01303457.1| Putative cytosine/adenosine deaminase [Sphingomonas sp. SKA58]
 gi|94423559|gb|EAT08586.1| Putative cytosine/adenosine deaminase [Sphingomonas sp. SKA58]
          Length = 175

 Score =  128 bits (324), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 35/146 (23%), Positives = 61/146 (41%), Gaps = 8/146 (5%)

Query: 2   KKGNVFMSCALEEAQ-NAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +  + +M  A++ A+   +   + P+ A+ VL+  ++++  N   E  D TAHAE++A R
Sbjct: 15  ETDSKWMQRAIDLARSKGSSPQDTPIAAIIVLDGAVLAQGVNETDERCDATAHAEMMAFR 74

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN------GT 114
              ++     L    LY TL+PC MC  A    +I R+ YGA       +          
Sbjct: 75  AAGQVHGDMDLRGATLYSTLQPCGMCTMASIWTKIGRIVYGAGRDDVHAMYFEDRHLDTM 134

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQI 140
            F   A       +  G  +     +
Sbjct: 135 DFIADAWRD-DLTLEGGCLKDACASL 159


>gi|323347994|gb|EGA82253.1| Tad2p [Saccharomyces cerevisiae Lalvin QA23]
          Length = 244

 Score =  128 bits (324), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 35/151 (23%), Positives = 65/151 (43%), Gaps = 13/151 (8%)

Query: 8   MSCALEEAQNAALRNEIPVGAVA--VLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M  A+  A+ A   +E PV  +       ++++   N   +     AHAE + I     +
Sbjct: 1   MRTAVRLARYALDHDETPVACIFEHTPTGQVMAYGMNDTNKSLTGVAHAEFMGIDQIKAM 60

Query: 66  LSQ----EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL-- 119
           L      ++  ++ LYVT+EPC MCA+A+    I ++ +G  N + GG            
Sbjct: 61  LGSRGVVDVFKDITLYVTVEPCIMCASALKQLGIGKVVFGCGNERFGGNGTVLSVNHDTC 120

Query: 120 ---ATCHHS--PEIYPGISEQRSRQIIQDFF 145
                 + +   E  PGI  + +  +++ F+
Sbjct: 121 TLVPKNNSAAGYESIPGILRKEAIMLLRYFY 151


>gi|238019274|ref|ZP_04599700.1| hypothetical protein VEIDISOL_01138 [Veillonella dispar ATCC 17748]
 gi|237863973|gb|EEP65263.1| hypothetical protein VEIDISOL_01138 [Veillonella dispar ATCC 17748]
          Length = 404

 Score =  128 bits (323), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 41/153 (26%), Positives = 60/153 (39%), Gaps = 21/153 (13%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           M     +M  A+  A+ A       P VGAV V +N II    +     K  TAHAE+ A
Sbjct: 1   MVDDVAYMKRAIALAKLATGHTSPNPLVGAVVVKDNTIIGEGYHH----KAGTAHAEVHA 56

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
           +         +      LYVTLEPC        CA  I  A I ++  G+++P       
Sbjct: 57  LNQAG-----DNAKGATLYVTLEPCSHYGKTPPCALRIIEAGIAKVVVGSTDPNPLVSGK 111

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
           G      A      E+   +  +   ++ + FF
Sbjct: 112 GMDLLREAG----IEVVCPVCSEECAELNEHFF 140


>gi|254466209|ref|ZP_05079620.1| cytosine deaminase [Rhodobacterales bacterium Y4I]
 gi|206687117|gb|EDZ47599.1| cytosine deaminase [Rhodobacterales bacterium Y4I]
          Length = 148

 Score =  128 bits (323), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 37/150 (24%), Positives = 63/150 (42%), Gaps = 15/150 (10%)

Query: 1   MKKGNV-FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
           M   +   +  A EEA+        P+G+V     +++++  N+  +  D  AH E+ A+
Sbjct: 2   MTDDDRRLLRIAYEEAKAGFDEGGCPIGSVLARGGQVVAQGRNQRVQKGDPIAHGEMDAL 61

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
           R   R  S     +  LY +L PC MC+  I    I R+  G +   GG      +F   
Sbjct: 62  RKAGRQTS---YRDTVLYTSLSPCMMCSGTIVQFGIPRVVIGDTQNFGG----NEEFLRA 114

Query: 120 ATCHHSPEIYPGISEQ-RSRQIIQDFFKER 148
                  E+   I+E      ++Q F +E+
Sbjct: 115 RG----VEVV--IAEDPDCIALMQRFIREK 138


>gi|312215394|emb|CBX95346.1| similar to cytosine deaminase [Leptosphaeria maculans]
          Length = 152

 Score =  128 bits (323), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 39/150 (26%), Positives = 66/150 (44%), Gaps = 13/150 (8%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAI 59
           M   ++    ALEEA+  +    +P+GA  V    KI+ R  N   +    T HAEI A+
Sbjct: 1   MSSADIGFQAALEEARTGSSEGGLPIGACLVSAQGKILGRGHNMRIQRGSATLHAEISAL 60

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
               R+ +     +  +Y TL PC MC  A  L +++R+  G +    GG ++       
Sbjct: 61  ERAGRLPASAY-QDATMYTTLSPCDMCTGACILYKVKRVVIGENQTFVGGEDHLKS---- 115

Query: 120 ATCHHSPEIYPGISEQ-RSRQIIQDFFKER 148
                  E+   + +    + ++ DF KE+
Sbjct: 116 ----KGIEVV--VLQDPECQNLMADFIKEK 139


>gi|260893814|ref|YP_003239911.1| riboflavin biosynthesis protein RibD [Ammonifex degensii KC4]
 gi|260865955|gb|ACX53061.1| riboflavin biosynthesis protein RibD [Ammonifex degensii KC4]
          Length = 370

 Score =  128 bits (323), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 46/152 (30%), Positives = 64/152 (42%), Gaps = 21/152 (13%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           +K+   FM  ALE A  A  R    P VGAV V   ++I+   +R   +     HAEI A
Sbjct: 4   LKEDEFFMRRALELALKARGRTSPNPMVGAVLVKEGRVIAEGYHRRAGM----PHAEIEA 59

Query: 59  IRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIEN 112
           +R        E      LYV LEPC        C  AI  A I+R+     +P       
Sbjct: 60  LRAAG-----EEARGATLYVNLEPCCHVGRTGPCTEAIIAAGIKRVVVAMEDPNPLVAGK 114

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
           G +    A      E+  G+ EQ +R++ + F
Sbjct: 115 GIKILREAGL----EVTVGVLEQEARRLNEVF 142


>gi|119962522|ref|YP_949093.1| cytidine/deoxycytidylate deaminase [Arthrobacter aurescens TC1]
 gi|119949381|gb|ABM08292.1| putative cytidine/deoxycytidylate deaminase [Arthrobacter aurescens
           TC1]
          Length = 164

 Score =  128 bits (323), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 36/119 (30%), Positives = 52/119 (43%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
             F++ ++E A    L +  P GAV V  +       NR     D TAHAE+ AIR  CR
Sbjct: 8   EQFLATSIELATANVLNSGGPFGAVIVTADGRAFEGVNRVTATNDPTAHAEVTAIRNACR 67

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123
            L    L    LY + EPC MC A+   AR+ R+++ A       +      +     +
Sbjct: 68  ELGTFDLSGATLYTSCEPCPMCLASALWARVDRVFFAADRHDAASVGFDDAVFYEYFEN 126


>gi|86139939|ref|ZP_01058504.1| cytosine deaminase [Roseobacter sp. MED193]
 gi|85823357|gb|EAQ43567.1| cytosine deaminase [Roseobacter sp. MED193]
          Length = 147

 Score =  128 bits (323), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 35/146 (23%), Positives = 60/146 (41%), Gaps = 14/146 (9%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
                +  A EEA+        P+G+V     +++++  N+  +  D  AH E+ A+R  
Sbjct: 4   DDTRLLRIAYEEAKAGFDEGGCPIGSVLARGGEVVAQGRNQRVQKGDPIAHGEMDALRKA 63

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
            R   Q+   +  LY +L PC MC   I    I R+  G  N   GG E   +F      
Sbjct: 64  GR---QKTYRDTTLYTSLSPCMMCTGTIIQFGIPRVVIG-ENKNFGGNE---EFLRSKG- 115

Query: 123 HHSPEIYPGISEQ-RSRQIIQDFFKE 147
               E+   +++      +++ F  E
Sbjct: 116 ---VEVI--VADDPDCIALMRRFIDE 136


>gi|27381264|ref|NP_772793.1| hypothetical protein blr6153 [Bradyrhizobium japonicum USDA 110]
 gi|27354431|dbj|BAC51418.1| blr6153 [Bradyrhizobium japonicum USDA 110]
          Length = 159

 Score =  128 bits (323), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 43/150 (28%), Positives = 61/150 (40%), Gaps = 14/150 (9%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRM 61
           +   F+  +   A+ +      P G V V  + K++    N      D TAHAE LA   
Sbjct: 5   RDEHFLRLSFAVARRSLTHGNHPFGCVVVAADGKVLIETENGYMPDCDGTAHAERLAATQ 64

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
            CR LS+E+L E  LY + EPC MCA AI  A I R+ YG S  +  G+          T
Sbjct: 65  ACRTLSREVLAEATLYSSAEPCAMCAGAIYWAGIGRVVYGLSEHRLRGVTG--NHPENPT 122

Query: 122 CH-----------HSPEIYPGISEQRSRQI 140
                           E+   + E  +  +
Sbjct: 123 LDLPCRTVFAGGQRPTEVVGPLLEDEAEVL 152


>gi|239996129|ref|ZP_04716653.1| cytidine/deoxycytidylate deaminase family protein [Alteromonas
           macleodii ATCC 27126]
          Length = 109

 Score =  128 bits (323), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 27/90 (30%), Positives = 44/90 (48%)

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
           +     +    L +  LYVTLEPC+MCA  +  AR++R+ +GA + K G   +       
Sbjct: 1   KEAAAAVQNYRLIDATLYVTLEPCSMCAGMLVHARVKRVVFGAKDAKTGAAGSVMNLLQH 60

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
              +H  E+  G+        + DFF++RR
Sbjct: 61  PALNHQLEVVSGVLADECANKLSDFFRKRR 90


>gi|257126309|ref|YP_003164423.1| riboflavin biosynthesis protein RibD [Leptotrichia buccalis
           C-1013-b]
 gi|257050248|gb|ACV39432.1| riboflavin biosynthesis protein RibD [Leptotrichia buccalis
           C-1013-b]
          Length = 371

 Score =  128 bits (323), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 42/156 (26%), Positives = 65/156 (41%), Gaps = 20/156 (12%)

Query: 1   MKK--GNVFMSCALEEAQN-AALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56
           MK+     +M  A+E A+  A   N  P VGAV V   K+I    ++         HAE+
Sbjct: 1   MKENIDEKYMRMAIELAKKGARAVNPNPMVGAVVVQAGKVIGTGYHKYFGG----PHAEV 56

Query: 57  LAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGI 110
            A+    +  + + L    +YVTLEPC        CA  I    ++R   G+S+P     
Sbjct: 57  YALDEASK--NSKDLSNATIYVTLEPCSHYGKTPPCAEKIVKLGLKRCVIGSSDPNPKVA 114

Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
             G Q    A       +   + ++   ++ Q FFK
Sbjct: 115 GKGVQILKNAGIG----VAENVLKEECDKLNQVFFK 146


>gi|222106196|ref|YP_002546987.1| CMP/dCMP deaminase zinc-binding [Agrobacterium vitis S4]
 gi|221737375|gb|ACM38271.1| CMP/dCMP deaminase zinc-binding [Agrobacterium vitis S4]
          Length = 163

 Score =  128 bits (323), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 31/150 (20%), Positives = 58/150 (38%), Gaps = 14/150 (9%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRM 61
               F+  + + A  A      P GA+ V  + +++    N     +D+T HAE + +  
Sbjct: 10  DHEYFLRLSFKVALRAQETGNHPFGAILVGPDGEVLMEQENAYNPTRDMTGHAERVLMTR 69

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
             +  + E L +  +Y + EPC MCA A   A I R+ +G S  +   +          T
Sbjct: 70  ASQAYTPERLNQCTMYTSAEPCAMCAGAAYWAGIGRVVFGLSESQLKAMTG--NHPENPT 127

Query: 122 CH-----------HSPEIYPGISEQRSRQI 140
                         S E+   +  + + ++
Sbjct: 128 LDLPCRVVFEAGQRSVEVIGPLLSEEAAKL 157


>gi|19704838|ref|NP_602333.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Fusobacterium
           nucleatum subsp. nucleatum ATCC 25586]
 gi|296327621|ref|ZP_06870165.1| riboflavin biosynthesis protein RibD [Fusobacterium nucleatum
           subsp. nucleatum ATCC 23726]
 gi|19712714|gb|AAL93632.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase
           [Fusobacterium nucleatum subsp. nucleatum ATCC 25586]
 gi|296155267|gb|EFG96040.1| riboflavin biosynthesis protein RibD [Fusobacterium nucleatum
           subsp. nucleatum ATCC 23726]
          Length = 369

 Score =  128 bits (322), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 40/155 (25%), Positives = 62/155 (40%), Gaps = 25/155 (16%)

Query: 2   KKGNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57
                +M+ A+E A+       +   P VGAV V + KII    ++         HAE+ 
Sbjct: 4   NSDEKYMARAIELAKRG--TGGVNPNPLVGAVIVKDGKIIGEGWHKKFGG----PHAEVW 57

Query: 58  AIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIE 111
           A+         E      +YVTLEPC        CA  I  A I+R      +P      
Sbjct: 58  ALNEAG-----ENAKGATVYVTLEPCSHQGKTPPCAKRIIEAGIKRCVVACIDPNPLVAG 112

Query: 112 NGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
            G +       +   E+  G+ E+ +++I + FFK
Sbjct: 113 KGMKIIE----NAGIEVELGVLEKEAKEINKIFFK 143


>gi|146416895|ref|XP_001484417.1| conserved hypothetical protein [Meyerozyma guilliermondii ATCC
           6260]
          Length = 150

 Score =  128 bits (322), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 32/147 (21%), Positives = 62/147 (42%), Gaps = 11/147 (7%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVG-AVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
                ++ A+EEA+       +P+G A+   +  ++ R  N   +    T H EI  +  
Sbjct: 4   DDEKGLAIAIEEAKKGYEEGGVPIGGALISEDGTVLGRGHNLRFQKDSATLHGEISTLEN 63

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
             R+    +     +Y TL PC+MC+ A  +  ++R+  G  N    G E+  +   +  
Sbjct: 64  AGRLKGS-VYKNCTMYTTLSPCSMCSGACIMYGVKRVVVG-ENETFMGAEDWIRKLGIEV 121

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKER 148
            +        ++ Q  + ++  F KER
Sbjct: 122 VN--------LNNQECKDLMAKFIKER 140


>gi|284167540|ref|YP_003405818.1| CMP/dCMP deaminase zinc-binding protein [Haloterrigena turkmenica
           DSM 5511]
 gi|284017195|gb|ADB63145.1| CMP/dCMP deaminase zinc-binding protein [Haloterrigena turkmenica
           DSM 5511]
          Length = 163

 Score =  128 bits (322), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 35/143 (24%), Positives = 57/143 (39%), Gaps = 1/143 (0%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
                M  A E A+ A  R + P G V V ++ +I    NR     D+  H E+      
Sbjct: 19  DHEAHMRRAFELAREAIDRGDRPFGTVLVRDDTVIMADSNRVVTEDDIRRHPELHLAYRA 78

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGA-SNPKGGGIENGTQFYTLAT 121
           CR L  +   E  +Y + EPC MCA  +  A   R+ Y   S+      ++     +   
Sbjct: 79  CRELDPDERAETVMYTSTEPCPMCAGGMISAGFGRVVYSVGSDELPAFTDSEPAVRSAEI 138

Query: 122 CHHSPEIYPGISEQRSRQIIQDF 144
                ++   +  +  RQ+ +DF
Sbjct: 139 LDGVSDVTGPVLNEEGRQLHRDF 161


>gi|160885546|ref|ZP_02066549.1| hypothetical protein BACOVA_03546 [Bacteroides ovatus ATCC 8483]
 gi|156109168|gb|EDO10913.1| hypothetical protein BACOVA_03546 [Bacteroides ovatus ATCC 8483]
          Length = 351

 Score =  128 bits (322), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 44/154 (28%), Positives = 66/154 (42%), Gaps = 24/154 (15%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP----VGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56
           M++   +M   +E A+N      +P    VGAV V N +II    +         AHAE+
Sbjct: 7   MEE-EKYMRRCIELAKNGLC--NVPPNPTVGAVIVCNGRIIGEGYHIRCGE----AHAEV 59

Query: 57  LAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGI 110
            AIR    +  + +L    +YV+LEPC        CA  I   +I R+  G  +P     
Sbjct: 60  NAIRS---VKDESLLKHSTIYVSLEPCSHYGKTPPCADLIIEKQIPRIVIGCQDPFSEVA 116

Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
             G Q    A      E+  GI E+  + +I+ F
Sbjct: 117 GRGIQKLRDAGR----EVTVGILEEECQSLIRRF 146


>gi|260172134|ref|ZP_05758546.1| riboflavin biosynthesis protein ribD [Bacteroides sp. D2]
 gi|315920443|ref|ZP_07916683.1| conserved hypothetical protein [Bacteroides sp. D2]
 gi|313694318|gb|EFS31153.1| conserved hypothetical protein [Bacteroides sp. D2]
          Length = 351

 Score =  128 bits (322), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 43/154 (27%), Positives = 66/154 (42%), Gaps = 24/154 (15%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP----VGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56
           M++   +M   +E A+N      +P    VGAV V N +II    +         AHAE+
Sbjct: 7   MEE-EKYMRRCIELAKNGLC--NVPPNPMVGAVIVCNGRIIGEGYHIRCGE----AHAEV 59

Query: 57  LAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGI 110
            AIR    +  + +L    +YV+LEPC        CA  I   +I R+  G  +P     
Sbjct: 60  NAIRS---VKDESLLKHSTIYVSLEPCSHYGKTPPCADLIIEKQIPRIVIGCQDPFSEVA 116

Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
             G Q    A      E+  G+ E+  + +I+ F
Sbjct: 117 GRGIQKLRDAGR----EVIVGVLEEECQSLIRRF 146


>gi|206578758|ref|YP_002237260.1| cytidine/deoxycytidylate deaminase family protein [Klebsiella
           pneumoniae 342]
 gi|206567816|gb|ACI09592.1| cytidine/deoxycytidylate deaminase family protein [Klebsiella
           pneumoniae 342]
          Length = 152

 Score =  128 bits (322), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 35/107 (32%), Positives = 55/107 (51%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M   + ++  AL  A         P GAV V +++I++ A N      D TAHAE+ A+R
Sbjct: 1   MSADDRYLQRALALANQNIADGGRPFGAVLVRHDEIVAEAVNTFHLNGDPTAHAELNAVR 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKG 107
                L  E+L E  +Y + +PC MC +A+ L  +R +++  SN  G
Sbjct: 61  DLAARLGSEVLRECVIYASGQPCPMCLSALYLTGVREVFFANSNQDG 107


>gi|198273955|ref|ZP_03206487.1| hypothetical protein BACPLE_00091 [Bacteroides plebeius DSM 17135]
 gi|198273033|gb|EDY97302.1| hypothetical protein BACPLE_00091 [Bacteroides plebeius DSM 17135]
          Length = 346

 Score =  128 bits (322), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 40/152 (26%), Positives = 61/152 (40%), Gaps = 19/152 (12%)

Query: 1   MKKGNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           M     +M   ++ A+N          VGAV V + KII    +          HAE+ A
Sbjct: 1   MTIDEKYMRRCIQLARNGICHAAPNPMVGAVIVRDGKIIGEGYHVRCGEG----HAEVNA 56

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
           I     +  + +L +  +YV+LEPC        CA  I    I R+  G  +P       
Sbjct: 57  I---ASVKDESLLKDATIYVSLEPCSHYGKTPPCADLIIRKGIPRVVVGCVDPFSLVAGR 113

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
           G Q    A      E+  G+ E+  R++I+ F
Sbjct: 114 GIQKLRDAG----IEVTVGVLEKECRELIRAF 141


>gi|147919375|ref|YP_686889.1| putative cytosine deaminase [uncultured methanogenic archaeon RC-I]
 gi|110622285|emb|CAJ37563.1| putative cytosine deaminase [uncultured methanogenic archaeon RC-I]
          Length = 144

 Score =  128 bits (322), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 37/143 (25%), Positives = 64/143 (44%), Gaps = 12/143 (8%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           +VFM  A++EA+       IP+G+V V+N +I+    N+  +  D   HAEI  +R   R
Sbjct: 2   DVFMQAAIDEAKKGLAEGGIPIGSVMVINRRIVGSGHNKRVQDGDPVMHAEIDCLRSAGR 61

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
           +       +  LY TL PC +CA A+    I+++  G S    G               H
Sbjct: 62  VG---RYKDAVLYSTLMPCYLCAGAVVQFGIKKVIVGESKNFEGARAFMEA--------H 110

Query: 125 SPEIYPGISEQRSRQIIQDFFKE 147
             E+   +     + ++ +F ++
Sbjct: 111 GVEVVD-LDLPECKDMMAEFIQK 132


>gi|293115762|ref|ZP_05792940.2| guanine deaminase [Butyrivibrio crossotus DSM 2876]
 gi|292808437|gb|EFF67642.1| guanine deaminase [Butyrivibrio crossotus DSM 2876]
          Length = 194

 Score =  128 bits (322), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 28/107 (26%), Positives = 48/107 (44%), Gaps = 1/107 (0%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAI 59
            K    ++  A+E ++ +      P G V V  + +II   GN     K  T HAE + +
Sbjct: 36  WKSDEYYLEKAIEVSRKSRAGGNTPFGCVLVDGDGEIILEQGNVEITEKRCTGHAETVIM 95

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPK 106
               ++  ++ L    LY T EPC MCA A+    + ++ Y  +  +
Sbjct: 96  ERASKLYDKKFLWNCTLYTTCEPCPMCAGAVYWGNVGKVVYAMTEER 142


>gi|188996871|ref|YP_001931122.1| riboflavin biosynthesis protein RibD [Sulfurihydrogenibium sp.
           YO3AOP1]
 gi|188931938|gb|ACD66568.1| riboflavin biosynthesis protein RibD [Sulfurihydrogenibium sp.
           YO3AOP1]
          Length = 371

 Score =  128 bits (322), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 42/160 (26%), Positives = 61/160 (38%), Gaps = 21/160 (13%)

Query: 1   MKKGNVFMSCALEEA--QNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           +K    +M  AL+ A  +         VGAV V + KII +  +     K    HAE  A
Sbjct: 4   IKDLESYMKIALDLAKIRKGLTHPNPTVGAVIVKDGKIIGKGYH----TKAGMPHAEREA 59

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
           I+          L    ++VTLEPC        C  AI    I  +  G  +        
Sbjct: 60  IKDA--KEKGYDLKGSTMFVTLEPCCHYGRTPPCTNAIIEEGISEIVIGVLDQNPVVKGQ 117

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF---KERR 149
           G          H  ++  G+ E+   +I +DFF   KE+R
Sbjct: 118 GVNILKS----HGIKVITGVLEKECEKINEDFFTYIKEKR 153


>gi|124009330|ref|ZP_01694009.1| cytosine deaminase [Microscilla marina ATCC 23134]
 gi|123985107|gb|EAY25051.1| cytosine deaminase [Microscilla marina ATCC 23134]
          Length = 144

 Score =  128 bits (322), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 35/144 (24%), Positives = 64/144 (44%), Gaps = 12/144 (8%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           + FM  A+ +A+ +     IP+G+V + N +II++  N+  +  +   H E+  +    R
Sbjct: 2   DKFMEAAIAQAEKSYNEGGIPIGSVLMRNGEIIAQGHNKRVQEANPILHGEMDCLLNAGR 61

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
           I S     +  +Y TL PC MCA  I    I+++  G S    G  +            H
Sbjct: 62  IGS---YKDTVIYSTLMPCYMCAGTIVQFNIKKVVVGESRTFTGARKFMES--------H 110

Query: 125 SPEIYPGISEQRSRQIIQDFFKER 148
             E+   ++ Q+   ++  F  E+
Sbjct: 111 GVEVVD-LNLQKCVDMMTRFIDEK 133


>gi|212540050|ref|XP_002150180.1| cytosine deaminase, putative [Penicillium marneffei ATCC 18224]
 gi|210067479|gb|EEA21571.1| cytosine deaminase, putative [Penicillium marneffei ATCC 18224]
          Length = 148

 Score =  128 bits (322), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 38/150 (25%), Positives = 66/150 (44%), Gaps = 14/150 (9%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAI 59
           M+    F+  A+EEA+       +P+GA  V  + KI+ R  N   +    T H EI A+
Sbjct: 1   METDPGFI-AAVEEARQGQAEGGVPIGACLVSKDGKILGRGHNMRFQKGSATLHGEISAL 59

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
               R+ +        +Y TL PC MC  A  L +++R+  G +    GG     Q+   
Sbjct: 60  ENSGRLPASAY-EGATMYTTLSPCDMCTGACILYKVKRVVVGENKTFLGG----EQYLQS 114

Query: 120 ATCHHSPEIYPGISE-QRSRQIIQDFFKER 148
                  E+   + + +   +++ DF +E+
Sbjct: 115 RG----IEVV--VLQNEECIKLMTDFIREK 138


>gi|209885117|ref|YP_002288974.1| CMP/dCMP deaminase, zinc-binding [Oligotropha carboxidovorans OM5]
 gi|209873313|gb|ACI93109.1| CMP/dCMP deaminase, zinc-binding [Oligotropha carboxidovorans OM5]
          Length = 227

 Score =  128 bits (322), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 32/104 (30%), Positives = 55/104 (52%), Gaps = 2/104 (1%)

Query: 2   KKGNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
           ++    M+ A++  + A    +   P GAV V + ++++ +GN      D +AHAE+ AI
Sbjct: 72  EQDRKHMALAIQTMRQAGIVDKTGGPFGAVVVRDGEVLAASGNSVLRDNDPSAHAEVNAI 131

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
           R+ C+ +    L    L+ + E C MC A    ARI ++YY A+
Sbjct: 132 RIACKKIGAPNLRGATLFTSCECCPMCYATAYWARIDKIYYAAA 175


>gi|254495568|ref|ZP_05108490.1| cytosine deaminase [Legionella drancourtii LLAP12]
 gi|254355138|gb|EET13751.1| cytosine deaminase [Legionella drancourtii LLAP12]
          Length = 147

 Score =  128 bits (322), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 38/142 (26%), Positives = 62/142 (43%), Gaps = 10/142 (7%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
               ++  A+EEA+ +     IP+GAV V  ++II R  N+  +      H E+ A+   
Sbjct: 2   SHQRYLEAAIEEARRSLAEGGIPIGAVLVYQDRIIGRGHNQRVQKGSAILHGEMDALENA 61

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
            R    +I  +  LY TL PC MC+ AI L +I  +  G  N    G E+     T    
Sbjct: 62  GR-QQAKIYEQSILYTTLSPCAMCSGAILLYKIPYVVIG-ENQTFIGEES---LLTSRGV 116

Query: 123 HHSPEIYPGISEQRSRQIIQDF 144
               E+   +   +   +++ F
Sbjct: 117 --KLEV---LQNDKCITMMRHF 133


>gi|153001599|ref|YP_001367280.1| cytosine deaminase [Shewanella baltica OS185]
 gi|217972471|ref|YP_002357222.1| Cytosine deaminase [Shewanella baltica OS223]
 gi|151366217|gb|ABS09217.1| Cytosine deaminase [Shewanella baltica OS185]
 gi|217497606|gb|ACK45799.1| Cytosine deaminase [Shewanella baltica OS223]
          Length = 145

 Score =  127 bits (321), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 36/142 (25%), Positives = 62/142 (43%), Gaps = 10/142 (7%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           + F++ A+EEA+       IP+G+V V++ KI+ R  N+  +      HAE+  +    R
Sbjct: 2   DEFLAAAIEEAKQGLAEGGIPIGSVLVIDGKIVGRGHNKRVQKGSSVLHAEMDCLENAGR 61

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
             + E      LY TL PC MC+ A+ L  I ++  G +    G                
Sbjct: 62  FSAAEY-QRATLYSTLSPCDMCSGAVLLYGIPKVIVGENTTFQG--------PEAYVKSR 112

Query: 125 SPEIYPGISEQRSRQIIQDFFK 146
             ++   +     +Q++QDF  
Sbjct: 113 GVDVTV-VDNAECKQLMQDFIA 133


>gi|320534251|ref|ZP_08034764.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Actinomyces sp. oral taxon 171 str. F0337]
 gi|320133534|gb|EFW25969.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Actinomyces sp. oral taxon 171 str. F0337]
          Length = 108

 Score =  127 bits (321), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 43/108 (39%), Positives = 55/108 (50%)

Query: 42  NRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
           N      D TAHAEI A+R     L    L    L VTLEPCTMCA AI LAR+ RL  G
Sbjct: 1   NAREAEHDPTAHAEIRALRAAGAALGDSHLDGCTLVVTLEPCTMCAGAIVLARVARLVLG 60

Query: 102 ASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
           A  P+ G   +          +H  E+  G+  Q+S+ ++  FF +RR
Sbjct: 61  AWEPRTGACGSVRDVVRDTRSNHQVEVRAGLRAQQSQDLLTAFFADRR 108


>gi|313894496|ref|ZP_07828060.1| riboflavin biosynthesis protein RibD [Veillonella sp. oral taxon
           158 str. F0412]
 gi|313440892|gb|EFR59320.1| riboflavin biosynthesis protein RibD [Veillonella sp. oral taxon
           158 str. F0412]
          Length = 404

 Score =  127 bits (321), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 41/153 (26%), Positives = 61/153 (39%), Gaps = 21/153 (13%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           M     +M  A+  A+ A       P VGAV V +N II    +     K  TAHAE+ A
Sbjct: 1   MVDDVAYMKRAIALAKLATGHTSPNPLVGAVVVKDNTIIGEGYHH----KAGTAHAEVHA 56

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
           +         +      LYVTLEPC        CA  I  A I ++  G+++P       
Sbjct: 57  LNQAG-----DNAKGATLYVTLEPCSHYGKTPPCALRIIEAGIAKVVVGSTDPNPLVSGK 111

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
           G      A+     E+   +  +   ++ + FF
Sbjct: 112 GMDLLREAS----IEVVCPVCSEECVELNEHFF 140


>gi|332293298|ref|YP_004431907.1| CMP/dCMP deaminase zinc-binding protein [Krokinobacter diaphorus
           4H-3-7-5]
 gi|332171384|gb|AEE20639.1| CMP/dCMP deaminase zinc-binding protein [Krokinobacter diaphorus
           4H-3-7-5]
          Length = 147

 Score =  127 bits (321), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 35/104 (33%), Positives = 51/104 (49%), Gaps = 1/104 (0%)

Query: 1   MKKGNVFMSCALEEAQNAALR-NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
           M   + FM  A+  A+           GAV V + ++I+   N     +D T HAE+  I
Sbjct: 1   MSYQSSFMKQAIALAREGKDTDGGGAFGAVIVRSGQVIAACHNLVGGSQDPTQHAELRCI 60

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
           ++ C+ L  + L + DLY +  PC MC  A   AR   +YYGAS
Sbjct: 61  QLACKALGTKDLSDCDLYTSCVPCMMCLGAARWARFENIYYGAS 104


>gi|294791895|ref|ZP_06757043.1| riboflavin biosynthesis protein RibD [Veillonella sp. 6_1_27]
 gi|294457125|gb|EFG25487.1| riboflavin biosynthesis protein RibD [Veillonella sp. 6_1_27]
          Length = 404

 Score =  127 bits (321), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 43/153 (28%), Positives = 62/153 (40%), Gaps = 21/153 (13%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           M    V+M  A+E A+ A       P VGAV V +N II    +     K  TAHAE+ A
Sbjct: 1   MVDDVVYMKRAIELAKLATGHTSPNPLVGAVVVKDNTIIGEGYHH----KAGTAHAEVHA 56

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
           +         +      LYVTLEPC        CA  I  A I ++  G+++P       
Sbjct: 57  LNQAG-----DNAKGATLYVTLEPCSHYGKTPPCALRIIEAGIAKVIVGSTDPNPLVSGK 111

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
           G +    A      E+   +      ++ + FF
Sbjct: 112 GMELLREAG----IEVVCPVCSDECAELNEHFF 140


>gi|269798015|ref|YP_003311915.1| riboflavin biosynthesis protein RibD [Veillonella parvula DSM 2008]
 gi|269094644|gb|ACZ24635.1| riboflavin biosynthesis protein RibD [Veillonella parvula DSM 2008]
          Length = 404

 Score =  127 bits (321), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 43/153 (28%), Positives = 62/153 (40%), Gaps = 21/153 (13%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           M    V+M  A+E A+ A       P VGAV V +N II    +     K  TAHAE+ A
Sbjct: 1   MVDDVVYMKRAIELAKLATGHTSPNPLVGAVVVKDNTIIGEGYHH----KAGTAHAEVHA 56

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
           +         +      LYVTLEPC        CA  I  A I ++  G+++P       
Sbjct: 57  LNQAG-----DNAKGATLYVTLEPCSHYGKTPPCALRIIEAGIAKVIVGSTDPNPLVSGK 111

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
           G +    A      E+   +      ++ + FF
Sbjct: 112 GMELLREAG----IEVVCPVCSDECAELNEHFF 140


>gi|327540848|gb|EGF27409.1| guanine deaminase [Rhodopirellula baltica WH47]
          Length = 155

 Score =  127 bits (321), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 42/142 (29%), Positives = 57/142 (40%), Gaps = 7/142 (4%)

Query: 6   VFMSCALEEAQNAALRNEIPVGA-VAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
            +M   +          E P GA V   + K I+ A N+     D TAHAE++AI    +
Sbjct: 4   QWMKSVVTMTIEGVAMGEHPFGAGVFTDSGKQIAVAHNQVVSRCDPTAHAEVVAIGKAAK 63

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS-----NPKGGGIENGTQFYTL 119
            L    L  + L  T EPC MC AAI LA I R+ YGAS         G +         
Sbjct: 64  KLGDPDLSGLWLVSTGEPCPMCLAAIGLAGIERVAYGASASTIETANFGTLGLTASELAD 123

Query: 120 ATCHHSPEIYPGISEQRSRQII 141
                  ++  GI E     ++
Sbjct: 124 -QLSPPIQLTGGILEYDCSALL 144


>gi|228994217|ref|ZP_04154115.1| Cytosine deaminase [Bacillus pseudomycoides DSM 12442]
 gi|228765510|gb|EEM14166.1| Cytosine deaminase [Bacillus pseudomycoides DSM 12442]
          Length = 169

 Score =  127 bits (321), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 44/111 (39%), Positives = 62/111 (55%), Gaps = 3/111 (2%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +   +F+  ALEEA+ A   N  PVGA+ V  NN+I+ +  NR     D +AHAEI AIR
Sbjct: 3   EMDRLFLEMALEEAKKAMKENTYPVGAIIVGRNNEILGKGRNRVHTQDDASAHAEIDAIR 62

Query: 61  MGCRI--LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109
              +   L++E    + LY TLEPC MC  AI  +   R+ +  ++ KG G
Sbjct: 63  TAGKKLILAKENRLPITLYTTLEPCPMCTGAILFSHFTRVVWILNDDKGFG 113


>gi|2493560|sp|P78594|FCA1_CANAL RecName: Full=Cytosine deaminase; AltName: Full=Cytosine
           aminohydrolase
 gi|1762320|gb|AAC15782.1| cytosine deaminase [Candida albicans]
          Length = 150

 Score =  127 bits (321), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 31/147 (21%), Positives = 61/147 (41%), Gaps = 11/147 (7%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVG-AVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
                +  AL++A+ +     IP+G  +   ++ ++ +  N   +      H E+ A+  
Sbjct: 4   DDKKGLQVALDQAKKSYSEGGIPIGSCIISSDDTVLGQGHNERIQKHSAILHGEMSALEN 63

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
             R+  +    +  +Y TL PC+MC  AI L   +R+  G  N    G E          
Sbjct: 64  AGRLPGKTY-KDCTIYTTLSPCSMCTGAILLYGFKRVVMG-ENVNFLGNEKLL------- 114

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKER 148
             +  E+   +++Q    ++  F KE+
Sbjct: 115 IENGVEVV-NLNDQECIDLMAKFIKEK 140


>gi|84503628|ref|ZP_01001669.1| probable deaminase [Oceanicola batsensis HTCC2597]
 gi|84387959|gb|EAQ01010.1| probable deaminase [Oceanicola batsensis HTCC2597]
          Length = 155

 Score =  127 bits (321), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 32/134 (23%), Positives = 58/134 (43%), Gaps = 5/134 (3%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M K ++ M  A++ A+        P   + V + +I++ A N  ++  D + HAEI AIR
Sbjct: 1   MNKNDL-MQRAIDLAKENVENGGWPFSTIIVKDGEILAEAVNSVQKSHDPSDHAEIAAIR 59

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQ----F 116
           +  + L+   L    +YV   PC MC   + +A++  + Y     K     +        
Sbjct: 60  IASKKLASPDLSGCTMYVVGLPCPMCLTCMIMAKLTDVVYAVDVEKKDAALSKLPLTDAL 119

Query: 117 YTLATCHHSPEIYP 130
           Y L +  H  ++  
Sbjct: 120 YDLVSEDHGGKVVS 133


>gi|319425606|gb|ADV53680.1| Cytosine deaminase [Shewanella putrefaciens 200]
          Length = 145

 Score =  127 bits (320), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 36/143 (25%), Positives = 64/143 (44%), Gaps = 10/143 (6%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           + F+  A++EA+       IP+G+V V++  I++R  N+  +      HAE+  +    R
Sbjct: 2   DEFLQAAIDEAKQGLAEGGIPIGSVLVIDGNIVARGHNKRVQQGSAVLHAEMDCLENAGR 61

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
            LS     +  LY TL PC MC+ AI L  I ++  G +    G      + Y  +    
Sbjct: 62  -LSAADYQKATLYSTLSPCDMCSGAILLYGIPKVVVGENITFQG-----PEAYVQSR--- 112

Query: 125 SPEIYPGISEQRSRQIIQDFFKE 147
             ++   +     +Q++ DF   
Sbjct: 113 GVDVTV-VDNPECKQLMLDFIAN 134


>gi|326791794|ref|YP_004309615.1| riboflavin biosynthesis protein RibD [Clostridium lentocellum DSM
           5427]
 gi|326542558|gb|ADZ84417.1| riboflavin biosynthesis protein RibD [Clostridium lentocellum DSM
           5427]
          Length = 363

 Score =  127 bits (320), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 40/153 (26%), Positives = 59/153 (38%), Gaps = 25/153 (16%)

Query: 4   GNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
              +M  AL  A+      ++   P VGAV V   +II    +          HAE+ AI
Sbjct: 2   HENYMRYALNLAKQGG--GKVSPNPLVGAVLVKEGRIIGEGYHEVYGAN----HAEVNAI 55

Query: 60  RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113
           +   +           LYVTLEPC        C   I   +I R+  G  +P      +G
Sbjct: 56  KSASQKS-----EGATLYVTLEPCNHYGKTPPCTETIIQNKIMRVVVGMRDPNPLVAGSG 110

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
            +    A      E+  GI E+  R++ + F K
Sbjct: 111 IKRLEDAG----IEVIVGILEEECRKLNEIFIK 139


>gi|92118729|ref|YP_578458.1| CMP/dCMP deaminase, zinc-binding [Nitrobacter hamburgensis X14]
 gi|91801623|gb|ABE63998.1| CMP/dCMP deaminase, zinc-binding protein [Nitrobacter hamburgensis
           X14]
          Length = 211

 Score =  127 bits (320), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 33/104 (31%), Positives = 54/104 (51%), Gaps = 2/104 (1%)

Query: 2   KKGNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
           ++    MS A+   + A    +   P GAV V + ++++ +GN      D +AHAE+ AI
Sbjct: 56  EQDRKHMSLAILTMRQAGVVDKTGGPFGAVVVRDGEVLAASGNSVLRDNDPSAHAEVNAI 115

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
           R+ C+ +    L    L+ + E C MC A    ARI ++YY A+
Sbjct: 116 RIACKKIGAPNLRGATLFTSCECCPMCYATAYWARISKIYYAAA 159


>gi|303390913|ref|XP_003073687.1| deoxycytidylate deaminase [Encephalitozoon intestinalis ATCC 50506]
 gi|303302834|gb|ADM12327.1| deoxycytidylate deaminase [Encephalitozoon intestinalis ATCC 50506]
          Length = 149

 Score =  127 bits (320), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 40/149 (26%), Positives = 63/149 (42%), Gaps = 23/149 (15%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
            + + FM  AL++A+ A  + E+PVG V V +  ++S++ N     K    HAE+++IR 
Sbjct: 6   SRHSFFMDMALDQAEKAFDQLEVPVGCVVVRDGIVVSKSHNMTNANKSPLDHAEVISIR- 64

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG---IENGTQFYT 118
                          YVT EPC MC   +   +  R+YYG  N   G       G +   
Sbjct: 65  ------STDCSNSTFYVTCEPCIMCMGILGRLKGVRVYYGCKNEIFGSETICGVGIESTY 118

Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKE 147
           L              + R  +I+Q F+  
Sbjct: 119 LP-------------DDRCFKILQKFYSR 134


>gi|153941176|ref|YP_001390638.1| guanine deaminase [Clostridium botulinum F str. Langeland]
 gi|152937072|gb|ABS42570.1| guanine deaminase [Clostridium botulinum F str. Langeland]
 gi|295318715|gb|ADF99092.1| guanine deaminase [Clostridium botulinum F str. 230613]
          Length = 157

 Score =  127 bits (320), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 36/113 (31%), Positives = 53/113 (46%), Gaps = 2/113 (1%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEI-PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
           M K  + M   ++        +E  P G+  V + ++I+ A N      D TAH E+  I
Sbjct: 1   MDKNEI-MDLCVKSCMEGMKNHEGGPFGSAIVKDGEMIAVAHNTVVGDNDPTAHGEVNVI 59

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN 112
           R  C+ L+   L   +LY T EPC MC +AI  A I ++YYG +      I  
Sbjct: 60  RKACKKLNTFDLSGCELYTTSEPCPMCMSAIIWANISKVYYGCTVEDARDIGF 112


>gi|330996373|ref|ZP_08320256.1| riboflavin biosynthesis protein RibD [Paraprevotella xylaniphila
           YIT 11841]
 gi|329573231|gb|EGG54845.1| riboflavin biosynthesis protein RibD [Paraprevotella xylaniphila
           YIT 11841]
          Length = 358

 Score =  127 bits (320), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 43/159 (27%), Positives = 61/159 (38%), Gaps = 21/159 (13%)

Query: 1   MKKGNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           M     +MS  ++ A+N          VGAV V + KII    +          HAE+ A
Sbjct: 1   MTTDEKYMSRCIQLARNGFYGAAPNPMVGAVIVHDGKIIGEGYHVRCGG----PHAEVNA 56

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
           IR      + E+L E  +YV+LEPC        CA  I    I R+  G  +P       
Sbjct: 57  IRSVG---NPELLKESTIYVSLEPCSHYGKTPPCADLIVEKGIPRVVVGCMDPFAKVAGR 113

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDF--FKERR 149
           G +    A      E+  G+ E     + + F  F   R
Sbjct: 114 GIRKLQEAG----IEVTVGVLEAECLALNRRFMTFHTHR 148


>gi|170757063|ref|YP_001780911.1| guanine deaminase [Clostridium botulinum B1 str. Okra]
 gi|169122275|gb|ACA46111.1| guanine deaminase [Clostridium botulinum B1 str. Okra]
          Length = 157

 Score =  127 bits (320), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 33/90 (36%), Positives = 45/90 (50%)

Query: 23  EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEP 82
             P G+  V N ++I+ A N      D TAH E+  IR  C+ L+   L   +LY T EP
Sbjct: 23  GGPFGSAIVKNGEVIAVAHNTVVGDNDPTAHGEVNVIRKACKKLNTFDLSGCELYTTSEP 82

Query: 83  CTMCAAAISLARIRRLYYGASNPKGGGIEN 112
           C MC +AI  A I ++YYG +      I  
Sbjct: 83  CPMCMSAIIWANISKVYYGCTVEDARDIGF 112


>gi|77410804|ref|ZP_00787162.1| riboflavin biosynthesis protein RibD [Streptococcus agalactiae
           CJB111]
 gi|77163183|gb|EAO74136.1| riboflavin biosynthesis protein RibD [Streptococcus agalactiae
           CJB111]
          Length = 369

 Score =  127 bits (320), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 39/154 (25%), Positives = 64/154 (41%), Gaps = 25/154 (16%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56
           M K   +M+ AL+EA+       +   P VGAV V +++IIS+  ++         HAE 
Sbjct: 1   MMKKEDYMALALKEAEKGM--GFVAPNPLVGAVIVKDDRIISKGYHKRFGDL----HAER 54

Query: 57  LAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGI 110
            AI+        E +    LYVTLEPC        C  A+  + I+++  G+ +P     
Sbjct: 55  QAIKNA-----DEDISGSTLYVTLEPCCHVGKQPPCTEALIKSGIKKVVVGSLDPNPLVS 109

Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
             G         +    +  GI  +    + + F
Sbjct: 110 GKGIALLRKEGLN----VEVGILREECDALNERF 139


>gi|190347436|gb|EDK39700.2| conserved hypothetical protein [Meyerozyma guilliermondii ATCC
           6260]
          Length = 150

 Score =  127 bits (320), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 32/147 (21%), Positives = 62/147 (42%), Gaps = 11/147 (7%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVG-AVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
                ++ A+EEA+       +P+G A+   +  ++ R  N   +    T H EI  +  
Sbjct: 4   DDEKGLAIAIEEAKKGYEEGGVPIGGALISEDGTVLGRGHNLRFQKDSATLHGEISTLEN 63

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
             R+    +     +Y TL PC+MC+ A  +  ++R+  G  N    G E+  +   +  
Sbjct: 64  AGRLKGS-VYKNCTMYTTLSPCSMCSGACIMYGVKRVVVG-ENETFMGAEDWIRKSGIEV 121

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKER 148
            +        ++ Q  + ++  F KER
Sbjct: 122 VN--------LNNQECKDLMAKFIKER 140


>gi|319744810|gb|EFV97150.1| riboflavin biosynthesis protein RibD [Streptococcus agalactiae ATCC
           13813]
          Length = 369

 Score =  127 bits (320), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 39/154 (25%), Positives = 64/154 (41%), Gaps = 25/154 (16%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56
           M K   +M+ AL+EA+       +   P VGAV V +++IIS+  ++         HAE 
Sbjct: 1   MMKKEDYMALALKEAEKGM--GFVAPNPLVGAVIVKDDRIISKGYHKRFGDL----HAER 54

Query: 57  LAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGI 110
            AI+        E +    LYVTLEPC        C  A+  + I+++  G+ +P     
Sbjct: 55  QAIKNA-----DEDISGSTLYVTLEPCCHVGKQPPCTEALIKSGIKKVVVGSLDPNPLVS 109

Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
             G         +    +  GI  +    + + F
Sbjct: 110 GKGIALLRKEGLN----VEVGILREECDALNERF 139


>gi|253578467|ref|ZP_04855739.1| riboflavin biosynthesis protein [Ruminococcus sp. 5_1_39B_FAA]
 gi|251850785|gb|EES78743.1| riboflavin biosynthesis protein [Ruminococcus sp. 5_1_39BFAA]
          Length = 375

 Score =  127 bits (320), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 42/153 (27%), Positives = 61/153 (39%), Gaps = 21/153 (13%)

Query: 1   MKKGNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           M+K   +M  ALE AQ           VGAV V   K+I +  +R         HAE  A
Sbjct: 7   MEKDRQYMKMALELAQKGMGFTAPNPMVGAVIVKRGKVIGQGYHRKYGE----PHAEREA 62

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
           +         E      +YVTLEPC        C  AI  + IRR+  G+S+P       
Sbjct: 63  L-----ASCTEQPEGASIYVTLEPCCHYGKQPPCVNAILESGIRRVIIGSSDPNPLVSGK 117

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
           G +        H  E+   + ++   ++ + FF
Sbjct: 118 GIRILKE----HGIEVTENVLKEECDKLNEAFF 146


>gi|77413098|ref|ZP_00789299.1| riboflavin biosynthesis protein RibD [Streptococcus agalactiae 515]
 gi|77160891|gb|EAO72001.1| riboflavin biosynthesis protein RibD [Streptococcus agalactiae 515]
          Length = 369

 Score =  127 bits (320), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 39/154 (25%), Positives = 64/154 (41%), Gaps = 25/154 (16%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56
           M K   +M+ AL+EA+       +   P VGAV V +++IIS+  ++         HAE 
Sbjct: 1   MMKKEDYMALALKEAEKGM--GFVAPNPLVGAVIVKDDRIISKGYHKRFGDL----HAER 54

Query: 57  LAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGI 110
            AI+        E +    LYVTLEPC        C  A+  + I+++  G+ +P     
Sbjct: 55  QAIKNA-----DEDISGSTLYVTLEPCCHVGKQPPCTEALIKSGIKKVVVGSLDPNPLVS 109

Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
             G         +    +  GI  +    + + F
Sbjct: 110 GKGIALLRKEGLN----VEVGILREECDALNERF 139


>gi|317494530|ref|ZP_07952943.1| cytidine and deoxycytidylate deaminase zinc-binding protein
           [Enterobacteriaceae bacterium 9_2_54FAA]
 gi|316917460|gb|EFV38806.1| cytidine and deoxycytidylate deaminase zinc-binding protein
           [Enterobacteriaceae bacterium 9_2_54FAA]
          Length = 152

 Score =  126 bits (319), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 32/107 (29%), Positives = 51/107 (47%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M   + ++  AL  A  +  +   P GAV V N ++++ A N      D TAHAE+  IR
Sbjct: 1   MSSHDEYLQRALALAAESVEQGGRPFGAVIVRNGEVVAEAVNTIHLNGDPTAHAELNGIR 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKG 107
                     L E  +Y + +PC MC +A+ L  ++ +Y+   N  G
Sbjct: 61  DVSTRHGSTALRECVVYASGQPCPMCLSAMYLTGVQAVYFANGNQDG 107


>gi|195952880|ref|YP_002121170.1| riboflavin biosynthesis protein RibD [Hydrogenobaculum sp. Y04AAS1]
 gi|195932492|gb|ACG57192.1| riboflavin biosynthesis protein RibD [Hydrogenobaculum sp. Y04AAS1]
          Length = 357

 Score =  126 bits (319), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 42/153 (27%), Positives = 69/153 (45%), Gaps = 21/153 (13%)

Query: 1   MKKGNVFMSCALEEAQN--AALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           + K   +M  ALEEA            VG + V ++KI+S   +     K  T HAEI+A
Sbjct: 2   INKDKYYMKLALEEAYKYKGQTHPNPAVGVLIVKDDKILSIGAH----KKAGTDHAEIVA 57

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
           ++       QE +    +YVTLEPC        C  AI  + I+++  G+ +P       
Sbjct: 58  LKNA-----QEDVKGATMYVTLEPCSFHGKTPPCCPAIISSGIKKVVIGSVDPNPKVSGK 112

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
           G ++   A      E+  G+ ++   ++ +DFF
Sbjct: 113 GIEWLKSAG----IEVEVGVLKEECDKLNEDFF 141


>gi|22536910|ref|NP_687761.1| riboflavin biosynthesis protein RibD [Streptococcus agalactiae
           2603V/R]
 gi|76788660|ref|YP_329494.1| riboflavin biosynthesis protein RibD [Streptococcus agalactiae
           A909]
 gi|77406006|ref|ZP_00783084.1| riboflavin biosynthesis protein RibD [Streptococcus agalactiae
           H36B]
 gi|22533761|gb|AAM99633.1|AE014225_16 riboflavin biosynthesis protein RibD [Streptococcus agalactiae
           2603V/R]
 gi|76563717|gb|ABA46301.1| riboflavin biosynthesis protein RibD [Streptococcus agalactiae
           A909]
 gi|77175401|gb|EAO78192.1| riboflavin biosynthesis protein RibD [Streptococcus agalactiae
           H36B]
          Length = 369

 Score =  126 bits (319), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 39/154 (25%), Positives = 64/154 (41%), Gaps = 25/154 (16%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56
           M K   +M+ AL+EA+       +   P VGAV V +++IIS+  ++         HAE 
Sbjct: 1   MMKKEDYMALALKEAEKGM--GFVAPNPLVGAVIVKDDRIISKGYHKRFGDL----HAER 54

Query: 57  LAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGI 110
            AI+        E +    LYVTLEPC        C  A+  + I+++  G+ +P     
Sbjct: 55  QAIKNA-----DEDISGSTLYVTLEPCCHVGKQPPCTEALIKSGIKKVVVGSLDPNPLVS 109

Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
             G         +    +  GI  +    + + F
Sbjct: 110 GKGIALLRKEGLN----VEVGILREECDALNERF 139


>gi|332666596|ref|YP_004449384.1| CMP/dCMP deaminase zinc-binding protein [Haliscomenobacter
           hydrossis DSM 1100]
 gi|332335410|gb|AEE52511.1| CMP/dCMP deaminase zinc-binding protein [Haliscomenobacter
           hydrossis DSM 1100]
          Length = 137

 Score =  126 bits (319), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 49/132 (37%), Positives = 62/132 (46%), Gaps = 4/132 (3%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
              F+ C  E A  +A     PVGAV + +  II+      R   DVT HAEI AIR   
Sbjct: 7   HPFFLRC-HELAATSAELGNPPVGAVLIRDGLIIAEGLELARSSGDVTRHAEIEAIRAAV 65

Query: 64  RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123
            IL    L + +L  T EPC MCA AI   RIRR+ Y  + P  GG+ +     +  T  
Sbjct: 66  HILKTSDLSDCELITTHEPCVMCAYAIRHYRIRRVVYELAVPTVGGVSSKFPVLSDPTFW 125

Query: 124 ---HSPEIYPGI 132
                PEI+ G 
Sbjct: 126 EARPVPEIHLGF 137


>gi|145229091|ref|XP_001388854.1| cytosine deaminase [Aspergillus niger CBS 513.88]
 gi|134054953|emb|CAK36962.1| unnamed protein product [Aspergillus niger]
          Length = 148

 Score =  126 bits (319), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 38/150 (25%), Positives = 66/150 (44%), Gaps = 14/150 (9%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAI 59
           M+    F+  A+EEA+  A    +P+GA  V  + KI+ R  N   +      HAE+ A+
Sbjct: 1   METDPGFI-AAVEEAKQGAAEGGVPIGACLVSKDGKILGRGHNMRVQKGSPVLHAEMSAL 59

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
               R+ +        +Y TL PC MC  A  L +++R+  G +    GG +        
Sbjct: 60  ENSGRLPASAY-EGATMYTTLSPCDMCTGACILYKVKRVVVGENKSFMGGEDYLKS---- 114

Query: 120 ATCHHSPEIYPGISEQ-RSRQIIQDFFKER 148
                  E+   + +    +Q+++ F KE+
Sbjct: 115 ----RGKEVV--VLDNAECKQLMEKFMKEK 138


>gi|320592583|gb|EFX05013.1| tRNA-specific adenosine deaminase [Grosmannia clavigera kw1407]
          Length = 684

 Score =  126 bits (319), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 40/177 (22%), Positives = 67/177 (37%), Gaps = 57/177 (32%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI---- 59
              +M+ A+  AQ A   NE PVG V V N ++I++  N     ++ T HAE++ +    
Sbjct: 314 HRGYMNEAVAMAQLALRTNETPVGCVLVHNGRVIAKGMNATNMTRNGTRHAELMCLNALL 373

Query: 60  ----------------------------------RMGCRILSQ----------------- 68
                                             R   R+                    
Sbjct: 374 AQWDDVSDVDSRRADDSDCDSAQDYDNDTDEFTDRDWARVNPSKGHLFPYGQKLHPARVV 433

Query: 69  --EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123
             +I+    LYVT+EPC MCA+ +    I+++Y+GA+N K GG     + +  +  +
Sbjct: 434 NPDIVRGCSLYVTVEPCIMCASMLRQYGIKKVYFGAANDKFGGTGGVLRIHMNSKPN 490


>gi|134094122|ref|YP_001099197.1| putative guanine deaminase [Herminiimonas arsenicoxydans]
 gi|133738025|emb|CAL61070.1| putative Guanine deaminase (Guanase) (Guanine aminase) (Guanine
           aminohydrolase) (GAH) (GDEase) [Herminiimonas
           arsenicoxydans]
          Length = 153

 Score =  126 bits (319), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 30/107 (28%), Positives = 47/107 (43%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M      +  A+  A+N   +   P GAV  ++ +II+   N      D T HAE+  +R
Sbjct: 1   MSDHAKLLGEAVRLAKNNHQQGGRPFGAVLTMDGEIIATGVNNIVHSHDPTTHAEMETLR 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKG 107
              + L +  L    +Y +  PC MC AA+ L  +  +YY   N   
Sbjct: 61  AASQRLGRPNLKGSVVYASGHPCPMCLAALVLTGVDAVYYAFDNQDA 107


>gi|332799789|ref|YP_004461288.1| riboflavin biosynthesis protein RibD [Tepidanaerobacter sp. Re1]
 gi|332697524|gb|AEE91981.1| riboflavin biosynthesis protein RibD [Tepidanaerobacter sp. Re1]
          Length = 361

 Score =  126 bits (319), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 38/155 (24%), Positives = 60/155 (38%), Gaps = 21/155 (13%)

Query: 1   MKKGNVFMSCALEEAQNAAL-RNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           M+    FM  ALE A+       E P VGAV V + KI+    ++         HAEI A
Sbjct: 1   METDEYFMQRALELAEKGRKTTGENPMVGAVIVKDGKIVGEGYHKKAGG----PHAEIEA 56

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
           ++               +YV LEPC        C  A+  A+I R+     +P       
Sbjct: 57  LKEAGL-----NAKGATIYVNLEPCCHYGKTPPCTEALIKAQIARVVAAIEDPNSKVAGK 111

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
           G         +   E+  G+ + ++ ++ + F K 
Sbjct: 112 GFSQLQ----NAGIEVSVGVLKNKASKLNEVFIKN 142


>gi|294675036|ref|YP_003575652.1| riboflavin biosynthesis protein RibD [Prevotella ruminicola 23]
 gi|294472928|gb|ADE82317.1| riboflavin biosynthesis protein RibD [Prevotella ruminicola 23]
          Length = 307

 Score =  126 bits (319), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 46/160 (28%), Positives = 66/160 (41%), Gaps = 20/160 (12%)

Query: 1   MKKGNVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           M     FM   ++ A+N  L       VGAV V N +II    +    L    AHAE+ A
Sbjct: 1   MIDDKKFMQRCIQLAKNGQLNAKPNPMVGAVIVHNGRIIGEGYHVRCGL----AHAEVNA 56

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
                R   + +LPE  +YV+LEPC        CA  I    +RR+  G  +        
Sbjct: 57  F-ASVRAEDEALLPESTIYVSLEPCSHYGKTPPCADLIIEKGVRRVVVGCIDEFAEVQGR 115

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF---KERR 149
           G Q    A      E+  G+ E   + + + FF   +E+R
Sbjct: 116 GIQKLRDAG----IEVEVGVLEDECKALNRRFFTFHREKR 151


>gi|302529650|ref|ZP_07281992.1| guanine deaminase [Streptomyces sp. AA4]
 gi|302438545|gb|EFL10361.1| guanine deaminase [Streptomyces sp. AA4]
          Length = 162

 Score =  126 bits (318), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 31/95 (32%), Positives = 48/95 (50%)

Query: 6   VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
            +++  +  A+        P GA+ V + +I++   NR     D TAHAE++AIR  C+ 
Sbjct: 12  AWLAECVRIAEKNVADGGGPFGALVVKDGEIVATGVNRVTPSLDPTAHAEVVAIRAACQA 71

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
           L    L    L  + EPC MC A+   AR+ R+ Y
Sbjct: 72  LGTFSLAGCVLVSSCEPCPMCLASSLWARVDRVLY 106


>gi|330991695|ref|ZP_08315645.1| putative cytosine deaminase [Gluconacetobacter sp. SXCC-1]
 gi|329761163|gb|EGG77657.1| putative cytosine deaminase [Gluconacetobacter sp. SXCC-1]
          Length = 280

 Score =  126 bits (318), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 37/158 (23%), Positives = 57/158 (36%), Gaps = 15/158 (9%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNR-NRELKDVTAHAEILAIR 60
               F+  A   A+ A    + P G + V    K++   GN    E  D+TAHAE L   
Sbjct: 122 DHEHFLRRAFAVAERARQGGDHPFGCILVDATGKVVLEQGNGYTAEGGDMTAHAERLLAT 181

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              +      L    +Y + EPC MCA A+  A I R+ YG S      +          
Sbjct: 182 RASKRFPPAELAGCTMYTSAEPCAMCAGAVYWAGIGRVVYGQSEHDLKAMTG--NHPENP 239

Query: 121 TCH-----------HSPEIYPGISEQRSRQIIQDFFKE 147
           T                 +   + E  + ++ + F+ E
Sbjct: 240 TLDLPCRTVFDAGQRRVAVIGPLLEAEAAELQRSFWAE 277


>gi|332974309|gb|EGK11241.1| guanine deaminase [Desmospora sp. 8437]
          Length = 146

 Score =  126 bits (318), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 36/99 (36%), Positives = 58/99 (58%), Gaps = 3/99 (3%)

Query: 7   FMSCALEEAQN--AALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           +M  A++ A    +  R E P GAV V   ++I+   N   +++D TAHAEI AIR  CR
Sbjct: 6   WMQQAMDLAAENVSRHRGE-PFGAVIVREGEVIATGVNETGKIQDPTAHAEIQAIREACR 64

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
            L + +L + +++ + EPC+MC  AI  A  R +++ A+
Sbjct: 65  KLGKTVLDDCEMFASGEPCSMCMGAIQWAGFRAVWFAAA 103


>gi|326315881|ref|YP_004233553.1| CMP/dCMP deaminase zinc-binding protein [Acidovorax avenae subsp.
           avenae ATCC 19860]
 gi|323372717|gb|ADX44986.1| CMP/dCMP deaminase zinc-binding protein [Acidovorax avenae subsp.
           avenae ATCC 19860]
          Length = 169

 Score =  126 bits (318), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 39/101 (38%), Positives = 54/101 (53%), Gaps = 1/101 (0%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIR 60
           ++   ++  A+  A  A  R   P GAV V  +  +++ A N N E  D TAHAE  AIR
Sbjct: 14  ERDGRYLRQAIALADKARARGNRPFGAVIVGDDGTVLAEAWNANGETGDCTAHAETSAIR 73

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
           +     ++E+L    LY + EPC MCA AI  A I R+ YG
Sbjct: 74  VASPRHAREVLARATLYSSGEPCVMCAGAIFWANIGRVVYG 114


>gi|332705458|ref|ZP_08425536.1| cytosine/adenosine deaminase [Lyngbya majuscula 3L]
 gi|332355818|gb|EGJ35280.1| cytosine/adenosine deaminase [Lyngbya majuscula 3L]
          Length = 147

 Score =  126 bits (318), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 39/137 (28%), Positives = 57/137 (41%), Gaps = 10/137 (7%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  A +EAQ       IP+G+V V   +I+ R  NR  +      H E+ A+       +
Sbjct: 1   MLAAFKEAQMGFQEGGIPIGSVVVKGGEIVGRGHNRRVQKGSAILHGEMDALEDVGSQPA 60

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
                +V LY TL PC+MC  AI L +I  +  G         EN T             
Sbjct: 61  SFY-QDVVLYTTLSPCSMCTGAILLYKIPHVVIG---------ENKTFLGEEELLRSRGV 110

Query: 128 IYPGISEQRSRQIIQDF 144
           I   +++    Q++QDF
Sbjct: 111 IVEVLNDDSCYQLMQDF 127


>gi|332881258|ref|ZP_08448908.1| riboflavin biosynthesis protein RibD [Capnocytophaga sp. oral taxon
           329 str. F0087]
 gi|332680634|gb|EGJ53581.1| riboflavin biosynthesis protein RibD [Capnocytophaga sp. oral taxon
           329 str. F0087]
          Length = 358

 Score =  126 bits (318), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 41/153 (26%), Positives = 61/153 (39%), Gaps = 21/153 (13%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57
           M     +MS  ++ A+N       P   VGAV V + KII    +          HAE+ 
Sbjct: 1   MTTDEKYMSRCIQLARNGF-YGAAPNPMVGAVIVHDGKIIGEGYHVRCGG----PHAEVN 55

Query: 58  AIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIE 111
           AIR    + + E+L E  +YV+LEPC        CA  I    I R+  G  +P      
Sbjct: 56  AIR---FVRNPELLKESTIYVSLEPCSHYGKTPPCADLIVEKGIPRVVVGCMDPFAKVAG 112

Query: 112 NGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
            G +    +      E+  G+ E     + + F
Sbjct: 113 RGIRKLQESG----IEVTVGVLEAECLALNRRF 141


>gi|323702710|ref|ZP_08114371.1| riboflavin biosynthesis protein RibD [Desulfotomaculum nigrificans
           DSM 574]
 gi|323532373|gb|EGB22251.1| riboflavin biosynthesis protein RibD [Desulfotomaculum nigrificans
           DSM 574]
          Length = 375

 Score =  126 bits (318), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 44/154 (28%), Positives = 67/154 (43%), Gaps = 21/154 (13%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           M +   FM  ALE A+ A  R    P VGAV V + +++ +  +     K  TAHAE++A
Sbjct: 1   MDQDKHFMQMALELARKARGRTSPNPMVGAVVVKDGQVVGQGWHA----KAGTAHAEVVA 56

Query: 59  IRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIEN 112
           +         E      +YVTLEPC        C  A+  A ++R+    ++P       
Sbjct: 57  LADAG-----EQARGATVYVTLEPCCHHGRTGPCTEALLKAGVKRVVAAMTDPNPLVAGK 111

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
           G      A      E+  G+ E  +RQ+ + F K
Sbjct: 112 GLAILRDAG----VEVQVGVLESEARQLNEIFIK 141


>gi|254567633|ref|XP_002490927.1| Cytosine deaminase, zinc metalloenzyme that catalyzes the
           hydrolytic deamination of cytosine to urac [Pichia
           pastoris GS115]
 gi|238030724|emb|CAY68647.1| Cytosine deaminase, zinc metalloenzyme that catalyzes the
           hydrolytic deamination of cytosine to urac [Pichia
           pastoris GS115]
 gi|328352537|emb|CCA38936.1| cytosine deaminase [Pichia pastoris CBS 7435]
          Length = 150

 Score =  126 bits (318), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 35/141 (24%), Positives = 56/141 (39%), Gaps = 11/141 (7%)

Query: 9   SCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
             AL+EAQ       IP+GA  V  +  ++    N   +      HAE+ A+    R+  
Sbjct: 10  KLALKEAQKGYEDGGIPIGAALVSEDGTVLGVGHNLRIQKGSSVFHAEMSALENAGRLPG 69

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
           +       +Y TL PC MC+ A  +  I+R+  G  N    G E   +   +   +    
Sbjct: 70  KTY-KNCTMYTTLSPCHMCSGACLMYGIKRVVLG-ENETFQGAEELLRSKGVEVVNAK-- 125

Query: 128 IYPGISEQRSRQIIQDFFKER 148
                     +++I  F KER
Sbjct: 126 ------NDECKELISKFIKER 140


>gi|255035691|ref|YP_003086312.1| CMP/dCMP deaminase zinc-binding [Dyadobacter fermentans DSM 18053]
 gi|254948447|gb|ACT93147.1| CMP/dCMP deaminase zinc-binding [Dyadobacter fermentans DSM 18053]
          Length = 140

 Score =  126 bits (318), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 37/122 (30%), Positives = 53/122 (43%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M + + F+    E A  A      PVGAV V    I+       R   D+T HAE+ AIR
Sbjct: 1   MDEHHKFLQRCHELALQAGRSGNTPVGAVIVREGVIVGEGIEATRPDNDITRHAEVEAIR 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
                L  + L    +Y T EPC +C+ AI   +I  + +  + P  GG+ +     T A
Sbjct: 61  DALNRLGTDKLTGCAMYTTHEPCILCSYAIRHYQISWVGFEHAVPAVGGVSSPWPILTAA 120

Query: 121 TC 122
             
Sbjct: 121 DI 122


>gi|25010822|ref|NP_735217.1| riboflavin biosynthesis protein RibD [Streptococcus agalactiae
           NEM316]
 gi|23095201|emb|CAD46411.1| Unknown [Streptococcus agalactiae NEM316]
          Length = 369

 Score =  126 bits (317), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 39/154 (25%), Positives = 64/154 (41%), Gaps = 25/154 (16%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56
           M K   +M+ AL+EA+       +   P VGAV V +++IIS+  ++         HAE 
Sbjct: 1   MMKKEDYMALALKEAEKGM--GFVAPNPLVGAVIVKDDRIISKGYHKRFGDL----HAER 54

Query: 57  LAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGI 110
            AI+        E +    LYVTLEPC        C  A+  + I+++  G+ +P     
Sbjct: 55  QAIKNA-----DEDISGSTLYVTLEPCCHVGKQPPCTEALIKSGIKKVVVGSLDPNPLVS 109

Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
             G         +    +  GI  +    + + F
Sbjct: 110 GKGIALLRKECLN----VEVGILREECDALNERF 139


>gi|116694743|ref|YP_728954.1| cytosine deaminase-related enzyme [Ralstonia eutropha H16]
 gi|113529242|emb|CAJ95589.1| cytosine deaminase-related enzyme [Ralstonia eutropha H16]
          Length = 155

 Score =  126 bits (317), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 36/108 (33%), Positives = 59/108 (54%), Gaps = 1/108 (0%)

Query: 1   MKKGNVFMSCALEEA-QNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
           M     ++  ++  A +N   RN  P GAV V + ++++RA N+     D +AHAE+ A+
Sbjct: 1   MSTTEAYLLDSIRLAMENVRERNTWPFGAVVVRDGEVLARAVNQVDATCDPSAHAEMQAV 60

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKG 107
           R   R L +  L    +Y +  PC+MC +A+ LA ++ +YY  SN  G
Sbjct: 61  RAASRALGKPDLSGCTVYASGYPCSMCLSAMYLAGVKAVYYAYSNEDG 108


>gi|152981801|ref|YP_001353377.1| hypothetical protein mma_1687 [Janthinobacterium sp. Marseille]
 gi|151281878|gb|ABR90288.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille]
          Length = 150

 Score =  126 bits (317), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 32/106 (30%), Positives = 47/106 (44%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
                F+  A+  AQ+   R   P GAV  +  + I+   N      D T HAE+ AIR+
Sbjct: 3   SNHEKFLREAVRLAQDNKARGGRPFGAVLAVGGESIAIGVNNIVHSNDPTTHAEMEAIRV 62

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKG 107
             + L +  L    +Y +  PC MC AA+ L  +  +YY   N   
Sbjct: 63  ASQKLGRPNLKGSVIYASGHPCPMCLAAMLLTGVDEVYYAFDNNDA 108


>gi|254433467|ref|ZP_05046975.1| hypothetical protein NOC27_398 [Nitrosococcus oceani AFC27]
 gi|207089800|gb|EDZ67071.1| hypothetical protein NOC27_398 [Nitrosococcus oceani AFC27]
          Length = 93

 Score =  126 bits (317), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 38/93 (40%), Positives = 48/93 (51%), Gaps = 1/93 (1%)

Query: 8  MSCALEEAQNAALRN-EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
          M+ A+  A          P GAV V + +I+ RA N    L+D TAHAE+ AIRM CR  
Sbjct: 1  MAEAISLASEGMADGLGGPFGAVVVRDGEILGRACNDVIALRDPTAHAEVQAIRMACRNF 60

Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRRLY 99
          +   L    LY + EPC MC  A   ARI  +Y
Sbjct: 61 NDFHLEGCALYCSCEPCPMCLGAAYWARIGWIY 93


>gi|87131002|gb|ABD24095.1| cytosine deaminase [Clavispora lusitaniae]
          Length = 153

 Score =  126 bits (317), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 34/147 (23%), Positives = 62/147 (42%), Gaps = 11/147 (7%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVG-AVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
              + M  A EEAQ       IP+G A+   +  I+ R  N   +    T H EI  +  
Sbjct: 4   DDKLGMQIAFEEAQKGYAEGGIPIGGALIHEDGTILGRGHNMRIQKNSATLHGEISTLEN 63

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
             R+    +     +Y TL PC MC+ A  +  ++R+  G  N    G E   +   +  
Sbjct: 64  AGRLPGG-VYKNCTMYTTLSPCHMCSGACLMYGVKRVVLG-ENENFVGAEKLLESMGVEV 121

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKER 148
            +        +++++ ++++  F +ER
Sbjct: 122 VN--------MNDEKCKELMSRFIRER 140


>gi|168178781|ref|ZP_02613445.1| guanine deaminase [Clostridium botulinum NCTC 2916]
 gi|182671437|gb|EDT83411.1| guanine deaminase [Clostridium botulinum NCTC 2916]
          Length = 157

 Score =  126 bits (317), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 36/113 (31%), Positives = 52/113 (46%), Gaps = 2/113 (1%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEI-PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
           M K  + M   ++        +E  P G+  V   ++I+ A N      D TAH E+  I
Sbjct: 1   MDKNEI-MDLCVKSCMEGMKNHEGGPFGSAIVKAGQVIAVAHNTVVGDNDPTAHGEVNVI 59

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN 112
           R  C+ L+   L   +LY T EPC MC +AI  A I ++YYG +      I  
Sbjct: 60  RKACKKLNTFDLSGCELYTTSEPCPMCMSAIIWANISKVYYGCTVEDARDIGF 112


>gi|299147398|ref|ZP_07040463.1| riboflavin biosynthesis protein RibD [Bacteroides sp. 3_1_23]
 gi|298514676|gb|EFI38560.1| riboflavin biosynthesis protein RibD [Bacteroides sp. 3_1_23]
          Length = 351

 Score =  126 bits (317), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 44/154 (28%), Positives = 66/154 (42%), Gaps = 24/154 (15%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP----VGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56
           M++   +M   +E A+N      +P    VGAV V N +II    +         AHAE+
Sbjct: 7   MEE-EKYMRRCIELAKNGLC--NVPPNPTVGAVIVCNGRIIGEGYHIRCGE----AHAEV 59

Query: 57  LAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGI 110
            AIR    +  + +L    +YV+LEPC        CA  I   +I R+  G  +P     
Sbjct: 60  NAIRS---VKDESLLKHSTIYVSLEPCSHYGKTPPCADLIIEKQIPRIVIGCQDPFSEVT 116

Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
             G Q    A      E+  GI E+  + +I+ F
Sbjct: 117 GRGIQKLRDAGR----EVTVGILEKECQSLIRRF 146


>gi|303231427|ref|ZP_07318158.1| riboflavin biosynthesis protein RibD [Veillonella atypica
           ACS-049-V-Sch6]
 gi|302513864|gb|EFL55875.1| riboflavin biosynthesis protein RibD [Veillonella atypica
           ACS-049-V-Sch6]
          Length = 406

 Score =  126 bits (317), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 41/153 (26%), Positives = 59/153 (38%), Gaps = 21/153 (13%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           M    ++M  A+  A+ A       P VGAV V NN I+    +         AHAE+ A
Sbjct: 1   MMNDELYMKRAISLAKMATGHTSPNPLVGAVVVKNNTIVGEGYHHKAGE----AHAEVHA 56

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
           +                LYVTLEPC        CA  +  + I R+  G+++P       
Sbjct: 57  LDAAG-----YNARGATLYVTLEPCAHYGKTPPCAKRVVESGIARVVIGSTDPNPLVAGK 111

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
           G Q  T A      E+   +      Q+ + FF
Sbjct: 112 GIQILTEAG----IEVTTDVCVDECIQLNEHFF 140


>gi|156040950|ref|XP_001587461.1| hypothetical protein SS1G_11453 [Sclerotinia sclerotiorum 1980]
 gi|154695837|gb|EDN95575.1| hypothetical protein SS1G_11453 [Sclerotinia sclerotiorum 1980
           UF-70]
          Length = 245

 Score =  126 bits (317), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 52/219 (23%), Positives = 72/219 (32%), Gaps = 74/219 (33%)

Query: 1   MKKGN-----VFMSCALEEAQNAALRNEIPVGAVAVLN--NKIISRAGNRNRELKDVTAH 53
           M K        FM  AL  A  A   NE PVG V V     K+++R  N      + T H
Sbjct: 19  MTKDEINTHIFFMGEALAMANLALNTNETPVGCVLVDPVLKKVVARGMNATNRSYNGTRH 78

Query: 54  AEILAI------------------RMG----------------------CRILSQEILPE 73
           AE +AI                  R                         R    E +  
Sbjct: 79  AEFIAIDELLSSSLRSDCGSADETREAKRKREENGSEADHGQGGGSEISGRGYGPENMKN 138

Query: 74  VDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS-------- 125
           +DLYVT+EPC MCA+ +    IR+++YGA N K GG       +       S        
Sbjct: 139 LDLYVTIEPCIMCASLLQQFGIRKVWYGAVNDKFGGNGGVLNIHISNGKFDSNETAEDRE 198

Query: 126 -------------------PEIYPGISEQRSRQIIQDFF 145
                               E+  G   + +  I++ F+
Sbjct: 199 GDIMEETGGGKRTQKQEGDYEVSGGWLREEAIVILRRFY 237


>gi|296130628|ref|YP_003637878.1| Guanine deaminase [Cellulomonas flavigena DSM 20109]
 gi|296022443|gb|ADG75679.1| Guanine deaminase [Cellulomonas flavigena DSM 20109]
          Length = 186

 Score =  126 bits (317), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 36/110 (32%), Positives = 52/110 (47%), Gaps = 2/110 (1%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
              +++ A+E A         P GAV V +   ++   NR     D TAHAE+ AIR  C
Sbjct: 33  DARWLARAVELATANVHDGGGPFGAVVVADGVEVAVGQNRVTRDLDPTAHAEVQAIRAAC 92

Query: 64  RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS--NPKGGGIE 111
           R      L  + LY + EPC +C AA   AR+ R+ + A   +   GG +
Sbjct: 93  RAADTFALDGMTLYTSCEPCPLCLAACLWARLDRVVFSADRHDASRGGFD 142


>gi|114770250|ref|ZP_01447788.1| cytosine deaminase [alpha proteobacterium HTCC2255]
 gi|114549087|gb|EAU51970.1| cytosine deaminase [alpha proteobacterium HTCC2255]
          Length = 147

 Score =  126 bits (317), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 38/150 (25%), Positives = 61/150 (40%), Gaps = 15/150 (10%)

Query: 1   MKKGNV-FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
           M   +   +  A  EA+        P+G+V     +I+S+  N+  +  D  AH E+ A+
Sbjct: 1   MNDDDKRLLRIAYNEAKLGFEEGGCPIGSVLARGAEIVSQGRNQRVQKGDPIAHGEMDAL 60

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
           R   R   Q+   +  LY +L PC MC   I    I R+  G  N   GG E   +F   
Sbjct: 61  RKAGR---QKTYRDTTLYTSLSPCMMCTGTILQFGIPRVVIG-ENKNFGGNE---EFLRS 113

Query: 120 ATCHHSPEIYPGISEQR-SRQIIQDFFKER 148
                  E+   I+      +++  F  E+
Sbjct: 114 KG----VEVL--IANDEDCIELMTKFINEK 137


>gi|222111201|ref|YP_002553465.1| cmp/dcmp deaminase zinc-binding [Acidovorax ebreus TPSY]
 gi|221730645|gb|ACM33465.1| CMP/dCMP deaminase zinc-binding [Acidovorax ebreus TPSY]
          Length = 155

 Score =  126 bits (317), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 29/107 (27%), Positives = 45/107 (42%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M      +  A+  A +   R   P GAV     ++I+   N      D + HAE+ A+R
Sbjct: 1   MSTDTALLRRAVHLAHDNRARGGRPFGAVIARGGEVIATGVNDIVHSHDPSTHAEMQALR 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKG 107
              R  +   L    +Y +  PC MC AA+ +A   R++Y   N   
Sbjct: 61  AATRQRANPSLAGCTVYASGHPCPMCLAALVMAGADRVFYAFDNRDA 107


>gi|114775692|ref|ZP_01451260.1| cytosine deaminase [Mariprofundus ferrooxydans PV-1]
 gi|114553803|gb|EAU56184.1| cytosine deaminase [Mariprofundus ferrooxydans PV-1]
          Length = 145

 Score =  126 bits (317), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 33/143 (23%), Positives = 59/143 (41%), Gaps = 10/143 (6%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           + F+  A++EA+       IP+G+V V++ +I+ R  NR  +      HAE+  +    R
Sbjct: 2   DKFLRAAIDEARQGMAEGGIPIGSVLVIDGEIVGRGHNRRVQQGSAVLHAEMDCLEQAGR 61

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
           + + +      LY TL PC MC+ A+ L  I R+  G ++   G                
Sbjct: 62  LTAADY-RRATLYSTLSPCDMCSGAVLLYGIPRVVVGENSTFQGPEGYVRSRGVEVVVV- 119

Query: 125 SPEIYPGISEQRSRQIIQDFFKE 147
                    +   R+++  F   
Sbjct: 120 --------DDAECRELMAQFIAA 134


>gi|255941100|ref|XP_002561319.1| Pc16g10090 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211585942|emb|CAP93679.1| Pc16g10090 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 148

 Score =  126 bits (317), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 36/150 (24%), Positives = 64/150 (42%), Gaps = 14/150 (9%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAI 59
           M++   F+  A+EEA+       +P+GA  V  + KI+ R  N   +      HAE+ A+
Sbjct: 1   MEQDPGFI-AAVEEAKQGLSEGGVPIGAALVSKDGKILGRGHNMRVQKGSAVLHAEMSAL 59

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
               R+ +        +Y TL PC MC  A  L +++R+  G +    GG          
Sbjct: 60  ENSGRLPASAY-EGATMYTTLSPCDMCTGACILYKVKRVVIGENKNFMGG--------EE 110

Query: 120 ATCHHSPEIYPGISEQ-RSRQIIQDFFKER 148
              +   E+   + +    ++ +  F KE+
Sbjct: 111 LLLNKGKEVV--VLDNAECKEFMTKFMKEK 138


>gi|18976434|ref|NP_577791.1| riboflavin-specific deaminase [Pyrococcus furiosus DSM 3638]
 gi|18891968|gb|AAL80186.1| riboflavin-specific deaminase [Pyrococcus furiosus DSM 3638]
          Length = 354

 Score =  125 bits (316), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 44/150 (29%), Positives = 61/150 (40%), Gaps = 18/150 (12%)

Query: 3   KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
               FM  AL  A+    L N  P VGAV V +NKII    ++    K    HAE+ AI 
Sbjct: 2   SDEKFMKLALRLARKGEGLTNPNPMVGAVLVKDNKIIGTGWHKRFGDK----HAEVNAIE 57

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
              R      +    LYVTLEPC        CA  I    I R+     +P       G 
Sbjct: 58  DAKRK--GYTIEGATLYVTLEPCSHWGKQPPCADRIIEEGISRVVIAMVDPNPLVSGRGI 115

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
           +    A      E+  G+ E+ ++++ + F
Sbjct: 116 KKLKEAG----VEVKVGVLEEEAKKLNEIF 141


>gi|213409075|ref|XP_002175308.1| tRNA-specific adenosine deaminase subunit tad2 [Schizosaccharomyces
           japonicus yFS275]
 gi|212003355|gb|EEB09015.1| tRNA-specific adenosine deaminase subunit tad2 [Schizosaccharomyces
           japonicus yFS275]
          Length = 365

 Score =  125 bits (316), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 38/142 (26%), Positives = 60/142 (42%), Gaps = 24/142 (16%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
            + FM  AL  A+ A   NE+P                           HAE++A+    
Sbjct: 217 HHQFMKEALNMAELALKWNEVP------------------------GIQHAELVAVEDIL 252

Query: 64  RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123
           +     I  EV LYVT+EPC MCAAA+    I+ +Y+G  N + GG  +        +  
Sbjct: 253 KRYPPSIFEEVTLYVTVEPCLMCAAALKQLHIKEVYFGCGNDRFGGCGSVFSINKDPSVD 312

Query: 124 HSPEIYPGISEQRSRQIIQDFF 145
               +YPG+    +  +++ F+
Sbjct: 313 PPYPVYPGLYRAEAIMLMRQFY 334


>gi|163852551|ref|YP_001640594.1| CMP/dCMP deaminase zinc-binding [Methylobacterium extorquens PA1]
 gi|163664156|gb|ABY31523.1| CMP/dCMP deaminase zinc-binding [Methylobacterium extorquens PA1]
          Length = 153

 Score =  125 bits (316), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 33/99 (33%), Positives = 51/99 (51%)

Query: 1  MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
          M     ++  A E A         P GAV V + ++I+RA NR     D + HAE++AIR
Sbjct: 1  MPDHESYLREATELALANVAEGGRPYGAVIVRDGEVIARAANRIHATNDPSDHAEMVAIR 60

Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLY 99
             + L +  L +  +Y +  PC MC AA+ LA +++ Y
Sbjct: 61 AASQQLGRPKLDDCIVYASGRPCPMCHAAMRLAGVKQGY 99


>gi|228953373|ref|ZP_04115419.1| Cytosine deaminase [Bacillus thuringiensis serovar kurstaki str.
           T03a001]
 gi|229080221|ref|ZP_04212748.1| Cytosine deaminase [Bacillus cereus Rock4-2]
 gi|229191139|ref|ZP_04318128.1| Cytosine deaminase [Bacillus cereus ATCC 10876]
 gi|228592289|gb|EEK50119.1| Cytosine deaminase [Bacillus cereus ATCC 10876]
 gi|228703116|gb|EEL55575.1| Cytosine deaminase [Bacillus cereus Rock4-2]
 gi|228806270|gb|EEM52843.1| Cytosine deaminase [Bacillus thuringiensis serovar kurstaki str.
           T03a001]
          Length = 158

 Score =  125 bits (316), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 47/142 (33%), Positives = 69/142 (48%), Gaps = 7/142 (4%)

Query: 10  CALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQ 68
            ALEEA+ A   N  PVGAV V  NN +I+R  NR    KD+TAHAEI AIR     +  
Sbjct: 1   MALEEAEKALKENTYPVGAVIVDGNNNVIARGRNRVHPQKDITAHAEIDAIRNAGEAMFD 60

Query: 69  EILPE--VDLYVTLEPCTMCAAAISLARIRRLYYGASNP-KGGGIENGTQFYTLATCHHS 125
             +      +Y TLEPC MC   I  A+I+R+ +  ++    GG +            + 
Sbjct: 61  AKIKNEKFTIYSTLEPCPMCTGGILFAKIQRVVWLLNDDLGFGGYKKIKNALVFEGKFNK 120

Query: 126 PEIYPGISEQ---RSRQIIQDF 144
            +I     E    R +++++ +
Sbjct: 121 IDIVEEPFEDLKTRQKELMRQW 142


>gi|189462016|ref|ZP_03010801.1| hypothetical protein BACCOP_02688 [Bacteroides coprocola DSM 17136]
 gi|189431230|gb|EDV00215.1| hypothetical protein BACCOP_02688 [Bacteroides coprocola DSM 17136]
          Length = 344

 Score =  125 bits (316), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 41/152 (26%), Positives = 62/152 (40%), Gaps = 19/152 (12%)

Query: 1   MKKGNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           M K   ++   ++ A+N          VGAV V N++II    +          HAE+ A
Sbjct: 1   MTKDEKYIRRCIQLARNGMCNAAPNPMVGAVIVCNDRIIGEGYHVRCGEG----HAEVNA 56

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
           IR    +  + +L +  +YV+LEPC        CA  I    I R+  G  +P       
Sbjct: 57  IRS---VKDESLLKKSTIYVSLEPCSHYGKTPPCADLIISKGIPRVVVGCVDPFSLVSGR 113

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
           G Q    A      E+  G+ E   R +I+ F
Sbjct: 114 GIQKLRDAG----IEVTVGVLENECRALIKRF 141


>gi|257455158|ref|ZP_05620396.1| riboflavin biosynthesis protein RibD [Enhydrobacter aerosaccus
           SK60]
 gi|257447491|gb|EEV22496.1| riboflavin biosynthesis protein RibD [Enhydrobacter aerosaccus
           SK60]
          Length = 359

 Score =  125 bits (316), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 45/155 (29%), Positives = 64/155 (41%), Gaps = 17/155 (10%)

Query: 3   KGNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +   +MS A+E A+      R    VG V V +N+II    +   +      HAE+ A+R
Sbjct: 12  QHQYYMSRAIELAKKGRFTTRPNPSVGCVIVKDNQIIGEGFH--YQAGQP--HAEVFALR 67

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
                 + + L     YVTLEPC        CA A+  A I R+     +P       G 
Sbjct: 68  QAYERDA-KHLQGAIAYVTLEPCSHHGRTPPCADALIQAGISRVVIAVVDPNPKVDGGGI 126

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
                A      E+  GI EQ + Q+ + FFK  R
Sbjct: 127 AKLQQAG----IEVITGICEQAAYQLNEGFFKVMR 157


>gi|281491487|ref|YP_003353467.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Lactococcus lactis subsp. lactis KF147]
 gi|281375205|gb|ADA64718.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase/
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Lactococcus lactis subsp. lactis KF147]
          Length = 362

 Score =  125 bits (316), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 42/155 (27%), Positives = 60/155 (38%), Gaps = 25/155 (16%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56
           MKK   +M  A+  A+       +   P VGA+ V   +II +  +         AHAEI
Sbjct: 1   MKKDEYYMDLAIVLAKKGG--GNVNPNPQVGALIVKEGRIIGQGYHEKYGE----AHAEI 54

Query: 57  LAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGI 110
            A          E      LYVTLEPC        C  AI   RI+R+  G  +P     
Sbjct: 55  NAF-----KDCNESPEGATLYVTLEPCAHQGKQPPCFEAIIKNRIKRVVIGHLDPNPLVS 109

Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
             G +    A      E+   + E+   ++ + FF
Sbjct: 110 GKGIKAMKEAG----IEVSINVLEKECEELNKIFF 140


>gi|183597629|ref|ZP_02959122.1| hypothetical protein PROSTU_00918 [Providencia stuartii ATCC 25827]
 gi|188022897|gb|EDU60937.1| hypothetical protein PROSTU_00918 [Providencia stuartii ATCC 25827]
          Length = 157

 Score =  125 bits (316), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 33/132 (25%), Positives = 56/132 (42%), Gaps = 4/132 (3%)

Query: 20  LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVT 79
            +   P GAV V +N+++    N      D T HAE+  IR  C       L E  LY +
Sbjct: 24  KKGNEPFGAVLVKDNQVVMTGENHIHTESDPTYHAELGLIRQYCSEHKIMNLSEYTLYTS 83

Query: 80  LEPCTMCAAAISLARIRRLYYGAS-NPKGGGIENGTQFYTLATC---HHSPEIYPGISEQ 135
            EPC MC+ A+  +++ R+ Y  S +             +          PE+  G+ ++
Sbjct: 84  CEPCCMCSGAMVWSQLGRMVYSLSHDELAEIAGFNIMLGSDEIFAKSPFKPEVTHGVLKE 143

Query: 136 RSRQIIQDFFKE 147
           ++  I   +F+ 
Sbjct: 144 KAMLIYTQYFQA 155


>gi|313675594|ref|YP_004053590.1| riboflavin biosynthesis protein ribd [Marivirga tractuosa DSM 4126]
 gi|312942292|gb|ADR21482.1| riboflavin biosynthesis protein RibD [Marivirga tractuosa DSM 4126]
          Length = 359

 Score =  125 bits (315), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 43/159 (27%), Positives = 70/159 (44%), Gaps = 22/159 (13%)

Query: 2   KKGNVFMSCALEEAQ--NAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
           K+  +FM  AL+ A    A       VG V VL+ K+I    ++         HAE++AI
Sbjct: 12  KQDELFMQRALQLAGYGKATASPNPMVGCVIVLDGKVIGEGWHKKAGE----PHAEVMAI 67

Query: 60  RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113
           R    + + E+L     YVTLEPC        CA  +   +++++  GA +P       G
Sbjct: 68  RS---VENPELLKSSTAYVTLEPCAHYGKTPPCAELLVEKQLKKVVIGAVDPNPLVAGKG 124

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFF---KERR 149
            Q    A      E+   + EQ   ++ + FF   +++R
Sbjct: 125 IQILKKAG----IEVESAVLEQECLEVNKAFFTYMQKKR 159


>gi|238895863|ref|YP_002920599.1| putative adenosine deaminase [Klebsiella pneumoniae NTUH-K2044]
 gi|238548181|dbj|BAH64532.1| putative adenosine deaminase [Klebsiella pneumoniae subsp.
           pneumoniae NTUH-K2044]
          Length = 154

 Score =  125 bits (315), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 34/107 (31%), Positives = 55/107 (51%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M   + ++  AL  A+        P GAV V N++I++ + N      D TAHAE+ A+R
Sbjct: 3   MSAHDRYLQRALVLAKQNIADGGRPFGAVLVRNDEIVAESVNTFHLSGDPTAHAELNAVR 62

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKG 107
                L   +L E  +Y + +PC MC +A+ L  +R +++  SN  G
Sbjct: 63  DLAARLGSAVLRECVIYASGQPCPMCLSALYLTGVREVFFANSNQDG 109


>gi|300855387|ref|YP_003780371.1| riboflavin biosynthesis protein RibD [Clostridium ljungdahlii DSM
           13528]
 gi|300435502|gb|ADK15269.1| riboflavin biosynthesis protein RibD [Clostridium ljungdahlii DSM
           13528]
          Length = 372

 Score =  125 bits (315), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 45/155 (29%), Positives = 66/155 (42%), Gaps = 24/155 (15%)

Query: 1   MKK---GNVFMSCALEEAQ--NAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAE 55
           M+K      +M  AL+ A      +     VGAV V N KII +  +R        AHAE
Sbjct: 1   MEKENTDEKYMKEALKLALLGKGFVNPNPLVGAVIVKNGKIIGKGYHRFFGG----AHAE 56

Query: 56  ILAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGG 109
           + A+R        +     DLYVTLEPC        CA AI  A I+++  G+ +P    
Sbjct: 57  VYALREAG-----DNAQGADLYVTLEPCSHYGKTPPCAKAIVEAGIKKVVIGSVDPNPLV 111

Query: 110 IENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
              G +           E+  G+ E+ + +I + F
Sbjct: 112 SGRGVKILRDEN----IEVVTGVMEREAVKINEIF 142


>gi|319652245|ref|ZP_08006363.1| hypothetical protein HMPREF1013_02976 [Bacillus sp. 2_A_57_CT2]
 gi|317396068|gb|EFV76788.1| hypothetical protein HMPREF1013_02976 [Bacillus sp. 2_A_57_CT2]
          Length = 150

 Score =  125 bits (315), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 36/117 (30%), Positives = 50/117 (42%), Gaps = 2/117 (1%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           + FM  A+E A N       P GAV V    II+   N   +  DV+ HAE+LAIR    
Sbjct: 2   DHFMKRAIELAINNVKDGGQPFGAVLVKEQDIIAEGVNELHKKHDVSGHAELLAIRRAQE 61

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY--GASNPKGGGIENGTQFYTL 119
                 L    +Y + EPC +C  A+  A I ++YY     +    G+      Y  
Sbjct: 62  QFQTNDLAGFTMYASGEPCPLCLTAMYFAGIDKVYYCQSVDDAFHAGLGKSKMIYED 118


>gi|152971270|ref|YP_001336379.1| putative adenosine deaminase [Klebsiella pneumoniae subsp.
           pneumoniae MGH 78578]
 gi|330013669|ref|ZP_08307752.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Klebsiella sp. MS 92-3]
 gi|150956119|gb|ABR78149.1| putative adenosine deaminase [Klebsiella pneumoniae subsp.
           pneumoniae MGH 78578]
 gi|328533404|gb|EGF60142.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Klebsiella sp. MS 92-3]
          Length = 152

 Score =  125 bits (315), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 34/107 (31%), Positives = 55/107 (51%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M   + ++  AL  A+        P GAV V N++I++ + N      D TAHAE+ A+R
Sbjct: 1   MSAHDRYLQRALVLAKQNIADGGRPFGAVLVRNDEIVAESVNTFHLSGDPTAHAELNAVR 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKG 107
                L   +L E  +Y + +PC MC +A+ L  +R +++  SN  G
Sbjct: 61  DLAARLGSAVLRECVIYASGQPCPMCLSALYLTGVREVFFANSNQDG 107


>gi|87307959|ref|ZP_01090102.1| cytosine deaminase [Blastopirellula marina DSM 3645]
 gi|87289573|gb|EAQ81464.1| cytosine deaminase [Blastopirellula marina DSM 3645]
          Length = 145

 Score =  125 bits (315), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 33/144 (22%), Positives = 63/144 (43%), Gaps = 10/144 (6%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           + F+  A+EEA+       IP+G+V V++ ++  +  NR  +      HAE+  +    R
Sbjct: 2   DEFLKLAIEEARKGLAEGGIPIGSVLVVDGQVRGQGHNRRVQKGSAILHAEMDCLEAAGR 61

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
            L+ +      LY TL PC MC+    L +I ++  G +    G      ++        
Sbjct: 62  -LTAKDYQRAVLYSTLSPCDMCSGTALLYKIPKIVIGENQTFQG----PEEYVRSRGV-- 114

Query: 125 SPEIYPGISEQRSRQIIQDFFKER 148
             EI   +      +++++F  +R
Sbjct: 115 QLEI---VDSAECIELMREFIAQR 135


>gi|332982092|ref|YP_004463533.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase;
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Mahella australiensis 50-1 BON]
 gi|332699770|gb|AEE96711.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase;
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Mahella australiensis 50-1 BON]
          Length = 363

 Score =  125 bits (315), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 43/152 (28%), Positives = 62/152 (40%), Gaps = 21/152 (13%)

Query: 3   KGNVFMSCALEEAQNAA-LRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +  +FM  ALE A+      N  P VGAV V   +II    ++         HAEI A+R
Sbjct: 2   QHEIFMQRALELARMGWGTTNPNPMVGAVIVKGGRIIGEGYHKKAGE----PHAEINALR 57

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
                   E      +YVTLEPC        CA A+  A ++ +     +P       G 
Sbjct: 58  EAG-----EGARGSTVYVTLEPCSHFGRTPPCADALVKAGVKEVVIAMEDPNPRVAGRGI 112

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
                A      ++  GI EQ +R++ + F K
Sbjct: 113 NALRQAG----IKVITGIMEQEARRLNEVFIK 140


>gi|126175278|ref|YP_001051427.1| cytosine deaminase [Shewanella baltica OS155]
 gi|125998483|gb|ABN62558.1| Cytosine deaminase [Shewanella baltica OS155]
          Length = 145

 Score =  125 bits (315), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 35/144 (24%), Positives = 61/144 (42%), Gaps = 10/144 (6%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           + F++ A+EEA+       IP+G+V V++ KI+ R  N+  +      HAE+  +    R
Sbjct: 2   DEFLAAAIEEAKQGLAEGGIPIGSVLVIDGKIVGRGHNKRVQKGSSVLHAEMDCLENAGR 61

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
             + E      LY TL PC MC+ A+ L  I ++  G +    G                
Sbjct: 62  FSAAEY-QRATLYSTLSPCDMCSGAVLLYGIPKVIVGENTTFQG--------PEAYVKSR 112

Query: 125 SPEIYPGISEQRSRQIIQDFFKER 148
             ++   +     +Q++ DF    
Sbjct: 113 GVDVTV-VDNTECKQLMHDFIANH 135


>gi|329890129|ref|ZP_08268472.1| guanine deaminase [Brevundimonas diminuta ATCC 11568]
 gi|328845430|gb|EGF94994.1| guanine deaminase [Brevundimonas diminuta ATCC 11568]
          Length = 150

 Score =  125 bits (315), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 32/109 (29%), Positives = 49/109 (44%), Gaps = 2/109 (1%)

Query: 1   MKKGNV--FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           M +     +++ A++ A         P GAV V +  +I+   NR     D ++HAE+ A
Sbjct: 1   MTEDEHRRWLTQAVDLALENVRAGGRPFGAVLVKDGALIASGVNRMLATNDPSSHAEMEA 60

Query: 59  IRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKG 107
           +R     L    L    LY +  PC MC AA  + R+  +YY  SN   
Sbjct: 61  LRQAGPALGGVDLSGAVLYASGHPCPMCLAAAVMTRVSAVYYAFSNADA 109


>gi|32475570|ref|NP_868564.1| cytosine deaminase [Rhodopirellula baltica SH 1]
 gi|32446112|emb|CAD75941.1| cytosine deaminase [Rhodopirellula baltica SH 1]
          Length = 187

 Score =  125 bits (315), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 35/143 (24%), Positives = 63/143 (44%), Gaps = 10/143 (6%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           + F+  AL EA+     + IP+G+V V++N+I+SR  NR  +      HAE+  +    R
Sbjct: 40  DPFLQAALNEARLGLNEHGIPIGSVLVIDNEIVSRGHNRRIQNGSSILHAEMDCLERAGR 99

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
           + + +      LY TL PC MC+ A  L +I R+  G +    G                
Sbjct: 100 LTANDY-SRSTLYSTLSPCDMCSGAALLYKIPRIIVGENQTFQGPESYVRSRGVDLQI-- 156

Query: 125 SPEIYPGISEQRSRQIIQDFFKE 147
                  +++    ++++ F + 
Sbjct: 157 -------VNDPDCIELMRAFIQN 172


>gi|170288788|ref|YP_001739026.1| riboflavin biosynthesis protein RibD [Thermotoga sp. RQ2]
 gi|170176291|gb|ACB09343.1| riboflavin biosynthesis protein RibD [Thermotoga sp. RQ2]
          Length = 348

 Score =  125 bits (314), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 41/149 (27%), Positives = 63/149 (42%), Gaps = 20/149 (13%)

Query: 5   NVFMSCALEEAQNAALR--NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
             FM  A+E A+    R     PVGAV V + +II+   +          HAE +AI   
Sbjct: 3   ETFMKRAIELAKKGLGRVNPNPPVGAVVVKDGRIIAEGFHPYFGG----PHAERMAIESA 58

Query: 63  CRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116
            +    E L    L VTLEPC        C   I  + I+ +  G  +P      NG + 
Sbjct: 59  RKK--GEDLRGATLIVTLEPCDHHGKTPPCTDLIIESGIKTVVIGTRDPNP-VSGNGVEK 115

Query: 117 YTLATCHHSPEIYPGISEQRSRQIIQDFF 145
           +     +H  E+  G+ E+  +++  +FF
Sbjct: 116 FR----NHGIEVIEGVLEEEVKKLC-EFF 139


>gi|15644572|ref|NP_229625.1| riboflavin-specific deaminase [Thermotoga maritima MSB8]
 gi|148270243|ref|YP_001244703.1| riboflavin biosynthesis protein RibD [Thermotoga petrophila RKU-1]
 gi|281412422|ref|YP_003346501.1| riboflavin biosynthesis protein RibD [Thermotoga naphthophila
           RKU-10]
 gi|4982410|gb|AAD36891.1|AE001819_14 riboflavin-specific deaminase [Thermotoga maritima MSB8]
 gi|147735787|gb|ABQ47127.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase /
           diaminohydroxyphosphoribosylaminopyrimidine deaminase
           [Thermotoga petrophila RKU-1]
 gi|281373525|gb|ADA67087.1| riboflavin biosynthesis protein RibD [Thermotoga naphthophila
           RKU-10]
          Length = 348

 Score =  125 bits (314), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 41/149 (27%), Positives = 63/149 (42%), Gaps = 20/149 (13%)

Query: 5   NVFMSCALEEAQNAALR--NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
             FM  A+E A+    R     PVGAV V + +II+   +          HAE +AI   
Sbjct: 3   ETFMKRAIELAKKGLGRVNPNPPVGAVVVKDGRIIAEGFHPYFGG----PHAERMAIESA 58

Query: 63  CRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116
            +    E L    L VTLEPC        C   I  + I+ +  G  +P      NG + 
Sbjct: 59  RKK--GEDLRGATLIVTLEPCDHHGKTPPCTDLIIESGIKTVVIGTRDPNP-VSGNGVEK 115

Query: 117 YTLATCHHSPEIYPGISEQRSRQIIQDFF 145
           +     +H  E+  G+ E+  +++  +FF
Sbjct: 116 FR----NHGIEVIEGVLEEEVKKLC-EFF 139


>gi|224536352|ref|ZP_03676891.1| hypothetical protein BACCELL_01226 [Bacteroides cellulosilyticus
           DSM 14838]
 gi|224522049|gb|EEF91154.1| hypothetical protein BACCELL_01226 [Bacteroides cellulosilyticus
           DSM 14838]
          Length = 348

 Score =  125 bits (314), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 42/150 (28%), Positives = 60/150 (40%), Gaps = 19/150 (12%)

Query: 3   KGNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +   +M   ++ AQN          VGAV V + KII    +         AHAE+ AIR
Sbjct: 5   EEEKYMRRCIQLAQNGLCNAAPNPMVGAVIVCDGKIIGEGYHVRCGK----AHAEVNAIR 60

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
               +    +L    +YV+LEPC        CA  I   +I R+  G  +P       G 
Sbjct: 61  S---VKETSLLKRSTIYVSLEPCSHHGKTPPCADLIIEKQIPRIVIGCQDPFSKVAGRGI 117

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
           Q    A      E+  G+ E   R +I+ F
Sbjct: 118 QKLKDAGR----EVIVGVLEDECRHLIKRF 143


>gi|73539205|ref|YP_299572.1| cytidine/deoxycytidylate deaminase, zinc-binding region [Ralstonia
           eutropha JMP134]
 gi|72122542|gb|AAZ64728.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [Ralstonia
           eutropha JMP134]
          Length = 152

 Score =  125 bits (314), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 32/107 (29%), Positives = 49/107 (45%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M      M  A+E A     R   P GAV  ++ + ++   N      D T HAE+ A+R
Sbjct: 1   MATHEHLMREAVELAVTNLRRGGRPFGAVLAIDGEAVATGVNDIVHSHDPTTHAEMEAVR 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKG 107
              R L +  L    +Y +  PC MC AA+++A ++ +YY   N   
Sbjct: 61  AAARKLGRPDLSGSVVYASGHPCPMCLAAMTMAGVQAVYYAFDNNDA 107


>gi|322433246|ref|YP_004210467.1| CMP/dCMP deaminase zinc-binding protein [Acidobacterium sp.
           MP5ACTX9]
 gi|321165638|gb|ADW71340.1| CMP/dCMP deaminase zinc-binding protein [Acidobacterium sp.
           MP5ACTX9]
          Length = 168

 Score =  125 bits (314), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 43/146 (29%), Positives = 61/146 (41%), Gaps = 8/146 (5%)

Query: 1   MK--KGNVFMSCALEEAQNAALR-NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57
           MK  K   FM+ ALE+A+          VG V V N  I+  + N      D TAHAE++
Sbjct: 1   MKDAKDLTFMAAALEQARIGQETPGGAQVGCVLVENGAIVCSSFNEGDLQFDPTAHAEMV 60

Query: 58  AIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFY 117
            IR  C+      L  V +Y TL+PC MC  A   A + R+ YGAS      +   ++ +
Sbjct: 61  GIRRLCKERRSISLKGVTVYCTLQPCGMCTMACLWAGVSRIVYGASRNDVNSVYFESRHF 120

Query: 118 T-----LATCHHSPEIYPGISEQRSR 138
                         E+  G+      
Sbjct: 121 DTADFIDQAFRDDLEVKGGVLSDECA 146


>gi|33593821|ref|NP_881465.1| hypothetical protein BP2880 [Bordetella pertussis Tohama I]
 gi|33563894|emb|CAE43152.1| conserved hypothetical protein [Bordetella pertussis Tohama I]
 gi|332383223|gb|AEE68070.1| hypothetical protein BPTD_2832 [Bordetella pertussis CS]
          Length = 169

 Score =  125 bits (314), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 31/105 (29%), Positives = 50/105 (47%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
             +  +  A+  A+  A     P GA+   +  +++R  NR     D TAH E+LA+R  
Sbjct: 15  DDDALLREAIALARANARAGGRPFGALVAKDGVVLARGVNRMLADHDPTAHTELLALREA 74

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKG 107
            R L    L    +Y + +PC MC AA+ ++ + R  Y  SN + 
Sbjct: 75  GRALRSARLDGCVVYASGQPCPMCLAAMRMSGVARAVYAYSNEQA 119


>gi|302875673|ref|YP_003844306.1| riboflavin biosynthesis protein RibD [Clostridium cellulovorans
           743B]
 gi|307688111|ref|ZP_07630557.1| riboflavin biosynthesis protein RibD [Clostridium cellulovorans
           743B]
 gi|302578530|gb|ADL52542.1| riboflavin biosynthesis protein RibD [Clostridium cellulovorans
           743B]
          Length = 364

 Score =  125 bits (314), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 41/153 (26%), Positives = 60/153 (39%), Gaps = 23/153 (15%)

Query: 4   GNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
              +M  ALE A+  A    +   P VGAV V N +II    ++         HAE+ AI
Sbjct: 2   NESYMRRALELAKLGA--GRVSPNPMVGAVIVKNGEIIGEGYHKQYGG----PHAEVNAI 55

Query: 60  RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113
                +     L    +YVTLEPC        C  AI   +I+ +  G  +P       G
Sbjct: 56  ---ASVSDNGELEGSTIYVTLEPCCHYGKTPPCTKAIIDNKIKTVVIGTLDPNPLVAGKG 112

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
            +           E+  G+ E+   +I + F K
Sbjct: 113 VEILRAEG----IEVIVGVLEEECLKINESFMK 141


>gi|304410115|ref|ZP_07391734.1| Cytosine deaminase [Shewanella baltica OS183]
 gi|307302173|ref|ZP_07581931.1| Cytosine deaminase [Shewanella baltica BA175]
 gi|304351524|gb|EFM15923.1| Cytosine deaminase [Shewanella baltica OS183]
 gi|306914211|gb|EFN44632.1| Cytosine deaminase [Shewanella baltica BA175]
          Length = 145

 Score =  125 bits (314), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 35/144 (24%), Positives = 61/144 (42%), Gaps = 10/144 (6%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           + F++ A+EEA+       IP+G+V V++ KI+ R  N+  +      HAE+  +    R
Sbjct: 2   DEFLAAAIEEAKQGLAEGGIPIGSVLVIDGKIVGRGHNKRVQKGSSVLHAEMDCLENAGR 61

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
             + E      LY TL PC MC+ A+ L  I ++  G +    G                
Sbjct: 62  FSAAEY-QRATLYSTLSPCDMCSGAVLLYGIPKVIVGENTTFQG--------PEAYVKSR 112

Query: 125 SPEIYPGISEQRSRQIIQDFFKER 148
             ++   +     +Q++ DF    
Sbjct: 113 GVDVTV-VDNAECKQLMHDFIANH 135


>gi|153808975|ref|ZP_01961643.1| hypothetical protein BACCAC_03276 [Bacteroides caccae ATCC 43185]
 gi|149128308|gb|EDM19527.1| hypothetical protein BACCAC_03276 [Bacteroides caccae ATCC 43185]
          Length = 348

 Score =  125 bits (314), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 43/152 (28%), Positives = 64/152 (42%), Gaps = 20/152 (13%)

Query: 1   MKKGNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           M++   +M   +E A+N          VGAV V + +II    +         AHAE+ A
Sbjct: 1   MEE-EKYMRRCIELAKNGLCNAAPNPMVGAVIVCDGRIIGEGYHIRCGE----AHAEVNA 55

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
           IR    +  + +L    +YV+LEPC        CA  I   +I R+  G  +P       
Sbjct: 56  IRS---VKDESLLKRSTIYVSLEPCSHYGKTPPCADLIIEKQIPRIVIGCQDPFSQVAGR 112

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
           G Q    A      E+  G+ E   RQ+I+ F
Sbjct: 113 GIQKLKDAGR----EVIVGVLESECRQLIRRF 140


>gi|282850242|ref|ZP_06259621.1| riboflavin biosynthesis protein RibD [Veillonella parvula ATCC
           17745]
 gi|282579735|gb|EFB85139.1| riboflavin biosynthesis protein RibD [Veillonella parvula ATCC
           17745]
          Length = 403

 Score =  125 bits (314), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 42/151 (27%), Positives = 61/151 (40%), Gaps = 21/151 (13%)

Query: 3   KGNVFMSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
              V+M  A+E A+ A       P VGAV V +N II    +     K  TAHAE+ A+ 
Sbjct: 2   DDVVYMKRAIELAKLATGHTSPNPLVGAVVVKDNTIIGEGYHH----KAGTAHAEVHALN 57

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
                   +      LYVTLEPC        CA  I  A I ++  G+++P       G 
Sbjct: 58  QAG-----DNAKGATLYVTLEPCSHYGKTPPCALRIIEAGIAKVIVGSTDPNPLVSGKGM 112

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
           +    A      E+   +      ++ + FF
Sbjct: 113 ELLREAG----IEVVCPVCSDECAELNEHFF 139


>gi|327542899|gb|EGF29355.1| cytosine deaminase [Rhodopirellula baltica WH47]
          Length = 149

 Score =  125 bits (314), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 35/143 (24%), Positives = 64/143 (44%), Gaps = 10/143 (6%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           + F+  AL+EA+     + IP+G+V V++N+I+SR  NR  +      HAE+  +    R
Sbjct: 2   DPFLQAALDEARLGLNEHGIPIGSVLVIDNEIVSRGHNRRIQNGSSILHAEMDCLERAGR 61

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
           + + +      LY TL PC MC+ A  L +I R+  G +    G                
Sbjct: 62  LTANDY-SRSTLYSTLSPCDMCSGAALLYKIPRIIVGENQTFQGPESYVRSRGVDLQI-- 118

Query: 125 SPEIYPGISEQRSRQIIQDFFKE 147
                  +++    ++++ F + 
Sbjct: 119 -------VNDPDCIELMRAFIQN 134


>gi|228921710|ref|ZP_04085027.1| Cytosine deaminase [Bacillus thuringiensis serovar huazhongensis
           BGSC 4BD1]
 gi|228837922|gb|EEM83246.1| Cytosine deaminase [Bacillus thuringiensis serovar huazhongensis
           BGSC 4BD1]
          Length = 158

 Score =  125 bits (314), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 48/142 (33%), Positives = 69/142 (48%), Gaps = 7/142 (4%)

Query: 10  CALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQ 68
            ALEEA+ A   N  PVGAV V  NN +I+R  NR    KD+TAHAEI AIR     +  
Sbjct: 1   MALEEAEKALKENTYPVGAVIVDGNNNVIARGRNRVHPQKDITAHAEIDAIRNAGEAMFD 60

Query: 69  EILPE--VDLYVTLEPCTMCAAAISLARIRRLYYGASNP-KGGGIENGTQFYTLATCHHS 125
             +      +Y TLEPC MC   I  A+I+R+ +  ++    GG +            + 
Sbjct: 61  AKIKNEKFTIYSTLEPCPMCTDGILFAKIQRVVWLLNDDLGFGGYKKIKNALVFEGKFNK 120

Query: 126 PEIYPGISEQ---RSRQIIQDF 144
            +I     E    R R++++ +
Sbjct: 121 IDIVEEPFEDLKTRQRELMRQW 142


>gi|303228926|ref|ZP_07315736.1| riboflavin biosynthesis protein RibD [Veillonella atypica
           ACS-134-V-Col7a]
 gi|302516340|gb|EFL58272.1| riboflavin biosynthesis protein RibD [Veillonella atypica
           ACS-134-V-Col7a]
          Length = 406

 Score =  125 bits (314), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 41/153 (26%), Positives = 60/153 (39%), Gaps = 21/153 (13%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           M    ++M  A+  A+ A       P VGAV V NN I+    +         AHAE+ A
Sbjct: 1   MMNDELYMKRAISLAKMATGHTSPNPLVGAVVVKNNTIVGEGYHHKAGE----AHAEVHA 56

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
           +         +      LYVTLEPC        CA  +  + I R+  G+++P       
Sbjct: 57  LDAAG-----DNARGATLYVTLEPCAHYGKTPPCAKRVVESGIARVVIGSTDPNPLVAGK 111

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
           G Q  T A      E+   +      Q+ + FF
Sbjct: 112 GIQILTEAG----IEVTTDVCVDECIQLNEHFF 140


>gi|86749931|ref|YP_486427.1| twin-arginine translocation pathway signal [Rhodopseudomonas
           palustris HaA2]
 gi|86572959|gb|ABD07516.1| Twin-arginine translocation pathway signal [Rhodopseudomonas
           palustris HaA2]
          Length = 176

 Score =  125 bits (314), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 30/104 (28%), Positives = 51/104 (49%), Gaps = 2/104 (1%)

Query: 2   KKGNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
           ++    M+ A+   + A    +     GAV V + ++++  GN      D +AHAE+ AI
Sbjct: 21  EQDRQHMTQAIALMRKAGVVEKTGGAFGAVIVRDGEVLAATGNSVLRDNDPSAHAEVNAI 80

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
           R  C+ +    L    +Y + E C MC A    AR+ R+++ AS
Sbjct: 81  RAACKKVGAPNLRGATMYTSCECCPMCYATAYWARLDRIFFAAS 124


>gi|319900207|ref|YP_004159935.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase;
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Bacteroides helcogenes P 36-108]
 gi|319415238|gb|ADV42349.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase;
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Bacteroides helcogenes P 36-108]
          Length = 347

 Score =  124 bits (313), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 45/159 (28%), Positives = 65/159 (40%), Gaps = 23/159 (14%)

Query: 1   MKKGNVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           MK    +M   ++ AQN          VGAV V + KII    +    +    AHAE+ A
Sbjct: 1   MK--EKYMRRCIQLAQNGLCNTAPNPMVGAVIVCDGKIIGEGYH----VHCGEAHAEVNA 54

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
           IR    +    +L    +YV+LEPC        CA  I   +I R+  G  +P       
Sbjct: 55  IRS---VKDPSLLQRATIYVSLEPCSHYGKTPPCADLIIEKQIPRIIIGCMDPFSKVAGR 111

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDF--FKERR 149
           G Q    A      E+  G+ E+  + +I+ F  F   R
Sbjct: 112 GIQKLKDAGR----EVIVGVLEEECKSLIRRFVTFHTLR 146


>gi|126699306|ref|YP_001088203.1| riboflavin biosynthesis protein [Clostridium difficile 630]
 gi|255100831|ref|ZP_05329808.1| riboflavin biosynthesis protein [Clostridium difficile QCD-63q42]
 gi|255306720|ref|ZP_05350891.1| riboflavin biosynthesis protein [Clostridium difficile ATCC 43255]
 gi|115250743|emb|CAJ68567.1| Riboflavin biosynthesis protein ribD [Includes:
           Diaminohydroxyphosphoribosylaminopyrimidine deaminase ;
           5-amino-6-(5-phosphoribosylamino)uracil reductase]
           [Clostridium difficile]
          Length = 370

 Score =  124 bits (313), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 42/159 (26%), Positives = 64/159 (40%), Gaps = 24/159 (15%)

Query: 2   KKGNVFMSCALEEAQNAAL-RNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
           +K   +M  A+E A+N     N  P VG V V ++ II +  +          HAE+ AI
Sbjct: 8   EKDIYYMKKAIELAKNGEGFVNPNPLVGCVIVKDSNIIGKGYHEKFGSN----HAEVNAI 63

Query: 60  RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113
               +      L +  LYV LEPC        C   I   +I+R+     +P      NG
Sbjct: 64  NSAKQ-----SLKDSTLYVNLEPCSHYGKTPPCVDKIIQNKIKRVVISTLDPNPLVCGNG 118

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFF---KERR 149
            +           ++  GI E  +R + + FF   K +R
Sbjct: 119 VKKLKDNN----IDVTVGILEDEARDLNEAFFYHIKNKR 153


>gi|254975336|ref|ZP_05271808.1| riboflavin biosynthesis protein [Clostridium difficile QCD-66c26]
 gi|255092726|ref|ZP_05322204.1| riboflavin biosynthesis protein [Clostridium difficile CIP 107932]
 gi|255314465|ref|ZP_05356048.1| riboflavin biosynthesis protein [Clostridium difficile QCD-76w55]
 gi|255517142|ref|ZP_05384818.1| riboflavin biosynthesis protein [Clostridium difficile QCD-97b34]
 gi|255650247|ref|ZP_05397149.1| riboflavin biosynthesis protein [Clostridium difficile QCD-37x79]
 gi|260683365|ref|YP_003214650.1| riboflavin biosynthesis protein [Clostridium difficile CD196]
 gi|260686960|ref|YP_003218093.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Clostridium difficile R20291]
 gi|306520226|ref|ZP_07406573.1| riboflavin biosynthesis protein [Clostridium difficile QCD-32g58]
 gi|260209528|emb|CBA63111.1| riboflavin biosynthesis protein [Clostridium difficile CD196]
 gi|260212976|emb|CBE04276.1| riboflavin biosynthesis protein [Clostridium difficile R20291]
          Length = 367

 Score =  124 bits (313), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 42/159 (26%), Positives = 64/159 (40%), Gaps = 24/159 (15%)

Query: 2   KKGNVFMSCALEEAQNAAL-RNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
           +K   +M  A+E A+N     N  P VG V V ++ II +  +          HAE+ AI
Sbjct: 5   EKDIYYMKKAIELAKNGEGFVNPNPLVGCVIVKDSNIIGKGYHEKFGSN----HAEVNAI 60

Query: 60  RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113
               +      L +  LYV LEPC        C   I   +I+R+     +P      NG
Sbjct: 61  NSAKQ-----SLKDSTLYVNLEPCSHYGKTPPCVDKIIQNKIKRVVISTLDPNPLVCGNG 115

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFF---KERR 149
            +           ++  GI E  +R + + FF   K +R
Sbjct: 116 VKKLKDNN----IDVTVGILEDEARDLNEAFFYHIKNKR 150


>gi|134299939|ref|YP_001113435.1| riboflavin biosynthesis protein RibD [Desulfotomaculum reducens
           MI-1]
 gi|134052639|gb|ABO50610.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase /
           diaminohydroxyphosphoribosylaminopyrimidine deaminase
           [Desulfotomaculum reducens MI-1]
          Length = 376

 Score =  124 bits (313), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 38/154 (24%), Positives = 66/154 (42%), Gaps = 21/154 (13%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           M +   +M+ ALE A  A  R    P VGAV V + +++ +  +         AHAE++A
Sbjct: 1   MDQDRHYMNMALELAAKARGRTSPNPMVGAVLVKDGEVVGKGFHAKAGG----AHAEVVA 56

Query: 59  IRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIEN 112
           +         +      +YVTLEPC        C  A+  A ++R+    ++P       
Sbjct: 57  LADAG-----DRAKGATVYVTLEPCCHHGKTGPCTEALKKAGVKRVVAAMTDPNPLVAGK 111

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
           G      A      E+  G+ E+ ++++ + F K
Sbjct: 112 GLNILKDAG----IEVVSGLLEEEAKELNEVFIK 141


>gi|189464287|ref|ZP_03013072.1| hypothetical protein BACINT_00628 [Bacteroides intestinalis DSM
           17393]
 gi|189438077|gb|EDV07062.1| hypothetical protein BACINT_00628 [Bacteroides intestinalis DSM
           17393]
          Length = 345

 Score =  124 bits (313), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 45/159 (28%), Positives = 64/159 (40%), Gaps = 22/159 (13%)

Query: 1   MKKGNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           M++   +M   ++ AQN          VGAV V + KII    +         AHAE+ A
Sbjct: 1   MEE-EKYMRRCIQLAQNGFCNAAPNPMVGAVIVCDGKIIGEGYHVRCGE----AHAEVNA 55

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
           IR    +    +L    +YV+LEPC        CA  I   +I R+  G  +P       
Sbjct: 56  IRS---VKDTSLLKRSTIYVSLEPCSHHGKTPPCADLIIEKQIPRIVIGCQDPFSKVAGR 112

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDF--FKERR 149
           G Q    A      E+  G+ E   R +I+ F  F   R
Sbjct: 113 GIQKLKDAGR----EVTVGVLENECRHLIRRFITFHTLR 147


>gi|240139885|ref|YP_002964362.1| Guanine deaminase (Guanase) (Guanine aminase) (Guanine
          aminohydrolase) (GAH) (GDEase) [Methylobacterium
          extorquens AM1]
 gi|240009859|gb|ACS41085.1| Guanine deaminase (Guanase) (Guanine aminase) (Guanine
          aminohydrolase) (GAH) (GDEase) [Methylobacterium
          extorquens AM1]
          Length = 153

 Score =  124 bits (313), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 32/99 (32%), Positives = 51/99 (51%)

Query: 1  MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
          M     ++  A E A         P GAV V + ++++RA NR     D + HAE++AIR
Sbjct: 1  MPNHESYLREATELALANVAEGGRPYGAVIVRDGEVVARAANRIHATNDPSDHAEMVAIR 60

Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLY 99
             + L +  L +  +Y +  PC MC AA+ LA +++ Y
Sbjct: 61 AASQQLGRPKLDDCIVYASGRPCPMCHAAMRLAGVKQGY 99


>gi|270295600|ref|ZP_06201801.1| riboflavin biosynthesis protein RibD [Bacteroides sp. D20]
 gi|270274847|gb|EFA20708.1| riboflavin biosynthesis protein RibD [Bacteroides sp. D20]
          Length = 351

 Score =  124 bits (313), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 45/158 (28%), Positives = 63/158 (39%), Gaps = 21/158 (13%)

Query: 2   KKGNVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
            +   +M   ++ AQN          VGAV V + KII    +         AHAE+ AI
Sbjct: 3   SEEEKYMLRCIQLAQNGLCNTAPNPMVGAVIVCDGKIIGEGYHVRCGE----AHAEVNAI 58

Query: 60  RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113
           R    +    +L    +YV+LEPC        CA  I   +I R+  G  +P       G
Sbjct: 59  RS---VKDTSLLKRSTIYVSLEPCSHYGKTPPCADLIIEKQIPRIVIGCRDPFSKVAGRG 115

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDF--FKERR 149
            Q    A      E+  G+ E   RQ+I+ F  F   R
Sbjct: 116 IQKLKDAGR----EVIVGVLETECRQLIRRFITFHTLR 149


>gi|237719659|ref|ZP_04550140.1| riboflavin biosynthesis protein ribD [Bacteroides sp. 2_2_4]
 gi|229450928|gb|EEO56719.1| riboflavin biosynthesis protein ribD [Bacteroides sp. 2_2_4]
          Length = 345

 Score =  124 bits (313), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 41/152 (26%), Positives = 64/152 (42%), Gaps = 20/152 (13%)

Query: 1   MKKGNVFMSCALEEAQNAALR--NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           M++   +M   +E A+N          VGAV V + +II    +         AHAE+ A
Sbjct: 1   MEE-EKYMRRCIELAKNGLCNVSPNPMVGAVIVCDGRIIGEGYHIRCGE----AHAEVNA 55

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
           IR    +  + +L    +YV+LEPC        CA  I   +I R+  G  +P       
Sbjct: 56  IRS---VKDESLLKRSTIYVSLEPCSHYGKTPPCADLIIEKQIPRIVIGCQDPFSEVAGR 112

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
           G Q    A      E+  G+ E+  + +I+ F
Sbjct: 113 GIQKLRDAGR----EVTVGVLEEECKSLIRRF 140


>gi|313203842|ref|YP_004042499.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase;
           5-aminO-6-(5-phosphoribosylamino)uracil reductase
           [Paludibacter propionicigenes WB4]
 gi|312443158|gb|ADQ79514.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase;
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Paludibacter propionicigenes WB4]
          Length = 360

 Score =  124 bits (313), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 43/156 (27%), Positives = 66/156 (42%), Gaps = 22/156 (14%)

Query: 5   NVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
            ++M   L+ A+     +     VGAV V N+KII    +         AHAE  AI   
Sbjct: 20  ELYMHRCLQLAELGVGYVAPNPMVGAVLVCNDKIIGEGYHHRYGE----AHAEPNAINSV 75

Query: 63  CRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116
             +   E+L +  LYV+LEPC        CA  I  + I R+  G  +P       G   
Sbjct: 76  KEV---ELLGQSTLYVSLEPCSHYGKTPPCADLIVSSGIPRVVIGTLDPNPKVAGKGVAK 132

Query: 117 YTLATCHHSPEIYPGISEQRSRQIIQDFF---KERR 149
                 +   E+  G+ E+  R++ + FF   ++RR
Sbjct: 133 LR----NAGVEVIVGVLEEECRELNKRFFIFQEQRR 164


>gi|294658696|ref|XP_002770827.1| DEHA2F15488p [Debaryomyces hansenii CBS767]
 gi|202953318|emb|CAR66350.1| DEHA2F15488p [Debaryomyces hansenii]
          Length = 147

 Score =  124 bits (313), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 35/147 (23%), Positives = 60/147 (40%), Gaps = 14/147 (9%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVG-AVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
                M  A EEA+    +  +P+G A+   +  I+ R  N   +    T H EI  +  
Sbjct: 4   DDKQGMKIAFEEAKK---KGGVPIGGALIHEDGTILGRGHNMRFQSSSATLHGEISTLEN 60

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
             R+    I  +  +Y TL PC MC  A  +  I+R+  G ++   GG            
Sbjct: 61  AGRLKGS-IYKKCTMYTTLSPCHMCTGACIMYGIKRVVLGENDNFVGG----EDLLKQKG 115

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKER 148
                E+   ++++  + ++  F KER
Sbjct: 116 ----IEVV-NLNDKDCKDLMSKFIKER 137


>gi|150865735|ref|XP_001385070.2| cytosine deaminase [Scheffersomyces stipitis CBS 6054]
 gi|149386991|gb|ABN67041.2| cytosine deaminase [Scheffersomyces stipitis CBS 6054]
          Length = 150

 Score =  124 bits (312), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 30/142 (21%), Positives = 56/142 (39%), Gaps = 11/142 (7%)

Query: 8   MSCALEEAQNAALRNEIPVG-AVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  ALEEA+       +P+G A+   +  ++ R  N   +      H E+  +    R+ 
Sbjct: 9   MQIALEEAKKGYEEGGVPIGGALISEDGTVLGRGHNMRFQKDSAILHGEMSVLENAGRLK 68

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
              +     +Y TL PC MC+ A  +  I+R+  G +    G                  
Sbjct: 69  GS-VYKNCTMYTTLSPCHMCSGACLMYGIKRVVLGENVNFVGAEA----LLRSEG----V 119

Query: 127 EIYPGISEQRSRQIIQDFFKER 148
           E+   +++   + +++ F  ER
Sbjct: 120 EVV-NLNDPECKALMKKFIDER 140


>gi|188582573|ref|YP_001926018.1| CMP/dCMP deaminase zinc-binding [Methylobacterium populi BJ001]
 gi|179346071|gb|ACB81483.1| CMP/dCMP deaminase zinc-binding [Methylobacterium populi BJ001]
          Length = 153

 Score =  124 bits (312), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 31/96 (32%), Positives = 48/96 (50%)

Query: 1  MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
          M     ++  A E A         P GAV V   ++++RA NR     D + HAE++AIR
Sbjct: 1  MPDHESYLREATELALANVAEGGRPYGAVIVREGEVVARAANRIHATNDPSDHAEMVAIR 60

Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIR 96
             + L +  L +  +Y +  PC MC AA+ LA ++
Sbjct: 61 AASQRLGRPKLDDCIVYASGRPCPMCHAAMRLAGVK 96


>gi|115377134|ref|ZP_01464348.1| riboflavin biosynthesis protein RibD [Stigmatella aurantiaca
           DW4/3-1]
 gi|310822848|ref|YP_003955206.1| Riboflavin biosynthesis protein RibD [Stigmatella aurantiaca
           DW4/3-1]
 gi|115365843|gb|EAU64864.1| riboflavin biosynthesis protein RibD [Stigmatella aurantiaca
           DW4/3-1]
 gi|309395920|gb|ADO73379.1| Riboflavin biosynthesis protein RibD [Stigmatella aurantiaca
           DW4/3-1]
          Length = 387

 Score =  124 bits (312), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 49/150 (32%), Positives = 66/150 (44%), Gaps = 21/150 (14%)

Query: 5   NVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
             FM  ALEEA     R      VGAV V   +II+R  +     K  TAHAE++A+   
Sbjct: 29  EFFMRIALEEAAKGLGRTSPNPAVGAVLVKGGRIIARGYH----KKAGTAHAEVVALEAA 84

Query: 63  CRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQF 116
                       DLY TLEPC        C+ AI  A +RR+  G+S+P       G   
Sbjct: 85  G-----PRARGADLYTTLEPCDHYGRTGPCSQAIIDAGVRRVICGSSDPNPKVNGKGVAR 139

Query: 117 YTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
              A      E+  G+ ++ + Q+ Q FFK
Sbjct: 140 LKKAG----VEVLTGVLQKDADQLNQPFFK 165


>gi|229179327|ref|ZP_04306681.1| Cytosine deaminase [Bacillus cereus 172560W]
 gi|228604225|gb|EEK61692.1| Cytosine deaminase [Bacillus cereus 172560W]
          Length = 158

 Score =  124 bits (312), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 47/142 (33%), Positives = 69/142 (48%), Gaps = 7/142 (4%)

Query: 10  CALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQ 68
            ALEEA+ A   N  PVGAV V  NN +I+R  NR    KD+TAHAEI AIR     +  
Sbjct: 1   MALEEAEMALKENTYPVGAVIVDGNNNVIARGRNRVHPQKDITAHAEIDAIRNAGEAMFD 60

Query: 69  EILPE--VDLYVTLEPCTMCAAAISLARIRRLYYGASNP-KGGGIENGTQFYTLATCHHS 125
             +      +Y TLEPC MC   I  A+I+R+ +  ++    GG +            + 
Sbjct: 61  AKIKNEKFTIYSTLEPCPMCTGGILFAKIQRVVWLLNDDLGFGGYKKIKNALVFEGKFNK 120

Query: 126 PEIYPGISEQ---RSRQIIQDF 144
            +I     E    R +++++ +
Sbjct: 121 IDIVEEPFEDLKTRQKELMRQW 142


>gi|87120113|ref|ZP_01076009.1| cytosine deaminase [Marinomonas sp. MED121]
 gi|86164815|gb|EAQ66084.1| cytosine deaminase [Marinomonas sp. MED121]
          Length = 173

 Score =  124 bits (312), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 33/102 (32%), Positives = 52/102 (50%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           ++ N ++   L  +Q A      P GA+ V++N++   A N      D T HAE+  +  
Sbjct: 16  EQDNHWLKQTLNLSQAAVDAGNHPFGALLVIDNRLALEAENTVNTYNDATRHAEMNLVSQ 75

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
            C+ LS+    E  LY + EPC MCA AI  + I+++ Y  S
Sbjct: 76  ACQNLSESQRKEAVLYTSTEPCAMCAGAIYWSGIKQVVYACS 117


>gi|160888034|ref|ZP_02069037.1| hypothetical protein BACUNI_00442 [Bacteroides uniformis ATCC 8492]
 gi|317478584|ref|ZP_07937741.1| riboflavin biosynthesis protein RibD [Bacteroides sp. 4_1_36]
 gi|156862533|gb|EDO55964.1| hypothetical protein BACUNI_00442 [Bacteroides uniformis ATCC 8492]
 gi|316905225|gb|EFV27022.1| riboflavin biosynthesis protein RibD [Bacteroides sp. 4_1_36]
          Length = 351

 Score =  124 bits (312), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 45/158 (28%), Positives = 63/158 (39%), Gaps = 21/158 (13%)

Query: 2   KKGNVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
            +   +M   ++ AQN          VGAV V + KII    +         AHAE+ AI
Sbjct: 3   SEEEKYMLRCIQLAQNGLCNTAPNPMVGAVIVCDGKIIGEGYHVRCGE----AHAEVNAI 58

Query: 60  RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113
           R    +    +L    +YV+LEPC        CA  I   +I R+  G  +P       G
Sbjct: 59  RS---VKDTSLLKRSTIYVSLEPCSHYGKTPPCADLIIEKQIPRIVIGCRDPFSKVAGRG 115

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDF--FKERR 149
            Q    A      E+  G+ E   RQ+I+ F  F   R
Sbjct: 116 IQKLKDAGR----EVIVGVLETECRQLIRRFITFHTLR 149


>gi|15672975|ref|NP_267149.1| riboflavin-specific deaminase [Lactococcus lactis subsp. lactis
           Il1403]
 gi|12723937|gb|AAK05091.1|AE006333_8 riboflavin-specific deaminase [Lactococcus lactis subsp. lactis
           Il1403]
          Length = 362

 Score =  124 bits (312), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 41/155 (26%), Positives = 58/155 (37%), Gaps = 25/155 (16%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56
           MKK   +M  A+  A        +   P VGA+ V   +II +  +         AHAEI
Sbjct: 1   MKKDEYYMDLAIVLANKGG--GNVNPNPQVGALIVKEGRIIGQGYHEKYGK----AHAEI 54

Query: 57  LAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGI 110
            A          E      LYVTLEPC        C  AI    I+R+  G  +P     
Sbjct: 55  NAF-----KDCNESPEGATLYVTLEPCAHQGKQPPCFEAIIKNGIKRVVIGHLDPNPLVS 109

Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
             G +    A      E+   + E+   ++ + FF
Sbjct: 110 GKGIKAMREAG----IEVSLNVLEKECEELNKIFF 140


>gi|313889107|ref|ZP_07822763.1| riboflavin biosynthesis protein RibD [Peptoniphilus harei
           ACS-146-V-Sch2b]
 gi|312844847|gb|EFR32252.1| riboflavin biosynthesis protein RibD [Peptoniphilus harei
           ACS-146-V-Sch2b]
          Length = 371

 Score =  124 bits (312), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 42/158 (26%), Positives = 62/158 (39%), Gaps = 21/158 (13%)

Query: 3   KGNVFMSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
               +M  ALE A+    + +  P VG V V ++KII +  +          HAE+ AI 
Sbjct: 7   NDIFYMERALEIAREGTGKTKTNPLVGCVIVKDDKIIGQGAHLKFGEN----HAEVNAIL 62

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
                   E +    LYV LEPC        CA  I    IRR+  G ++P       G 
Sbjct: 63  DA--KSRGEDIRGATLYVNLEPCSHYGKTPPCAERIVKEGIRRVVIGTADPFEKVSGRGI 120

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF---KERR 149
           +    A       +  G+ E+    + + FF   K +R
Sbjct: 121 KILEDAG----ISVTEGLCEEECLNLNERFFTYLKNKR 154


>gi|298482442|ref|ZP_07000628.1| riboflavin biosynthesis protein RibD [Bacteroides sp. D22]
 gi|298271421|gb|EFI12996.1| riboflavin biosynthesis protein RibD [Bacteroides sp. D22]
          Length = 351

 Score =  124 bits (312), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 42/152 (27%), Positives = 64/152 (42%), Gaps = 20/152 (13%)

Query: 1   MKKGNVFMSCALEEAQNAALR--NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           M++   +M   +E A+N          VGAV V N +II    +         AHAE+ A
Sbjct: 7   MEE-EKYMRRCIELAKNGLCNVSPNPMVGAVIVCNGRIIGEGYHIRCGE----AHAEVNA 61

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
           IR    +  + +L    +YV+LEPC        CA  I   +I R+  G  +P       
Sbjct: 62  IRS---VKDESLLKRSTIYVSLEPCSHYGKTPPCADLIIEKQIPRIVIGCQDPFSEVAGR 118

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
           G Q    A      E+  G+ E+  + +I+ F
Sbjct: 119 GIQKLRDAGR----EVTVGVLEEECKSLIRRF 146


>gi|85001518|ref|XP_955475.1| cytidine and deoxycytidylate deaminase family protein [Theileria
           annulata strain Ankara]
 gi|65303621|emb|CAI75999.1| cytidine and deoxycytidylate deaminase family protein, putative
           [Theileria annulata]
          Length = 183

 Score =  124 bits (312), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 41/162 (25%), Positives = 63/162 (38%), Gaps = 20/162 (12%)

Query: 6   VFMSCALEEAQNAALRNEIPVGAVAVLN--NKIISRAGNRNRELKDVTAHAEILAIRMGC 63
           +FM  ALEEA+ A  + EI V  + V     ++++ + N      + T H E+ AI    
Sbjct: 11  IFMKLALEEAKKALDKEEIAVACIIVSKATREVVASSSNATNLTYNSTWHCELEAINKLI 70

Query: 64  RILSQ------------EILPEVDLYVTLEPCTMCAAAISLARIRRL-YYGASNPKGGGI 110
            +               E      L+VT EPC MC  A+ +  I  L YYG  N K GG 
Sbjct: 71  DMEPNGYKSEQDSEKLREFCSGFALFVTCEPCIMCTTALQIIGIFLLMYYGCKNEKFGGC 130

Query: 111 ENGTQFYTLATCH-----HSPEIYPGISEQRSRQIIQDFFKE 147
            +    +                  G+  + S  ++Q F+  
Sbjct: 131 GSVLSLHLSKVIFRNGDLPRINCLGGLLSEESVNLLQTFYSR 172


>gi|260642492|ref|ZP_05859416.1| riboflavin biosynthesis protein RibD [Bacteroides finegoldii DSM
           17565]
 gi|260621884|gb|EEX44755.1| riboflavin biosynthesis protein RibD [Bacteroides finegoldii DSM
           17565]
          Length = 373

 Score =  123 bits (311), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 43/159 (27%), Positives = 65/159 (40%), Gaps = 22/159 (13%)

Query: 1   MKKGNVFMSCALEEAQNAALR--NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           M++   +M   +E A+N          VGAV V + +II    +         AHAE+ A
Sbjct: 29  MEE-EKYMRRCIELAKNGLCNVAPNPMVGAVIVCDGRIIGEGYHVRCGE----AHAEVNA 83

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
           IR    +  + +L    +YV+LEPC        CA  I   +I R+  G  +P       
Sbjct: 84  IRS---VKDESLLKRSTIYVSLEPCSHYGKTPPCADLIIEKQIPRIVIGCRDPFSKVAGR 140

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDF--FKERR 149
           G Q    A      E+  G+ E+    +I+ F  F   R
Sbjct: 141 GIQKLQNAGR----EVIVGVLEEECLHLIRRFITFNTLR 175


>gi|154305221|ref|XP_001553013.1| hypothetical protein BC1G_08905 [Botryotinia fuckeliana B05.10]
 gi|150853647|gb|EDN28839.1| hypothetical protein BC1G_08905 [Botryotinia fuckeliana B05.10]
          Length = 243

 Score =  123 bits (311), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 48/207 (23%), Positives = 68/207 (32%), Gaps = 69/207 (33%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNN--KIISRAGNRNRELKDVTAHAEILAIRMGC-- 63
           M  AL  A  A   NE PVG V V     K+++R  N      + T HAE +AI      
Sbjct: 1   MREALAMANLALSTNETPVGCVLVDPTLKKVVARGMNATNRSYNGTRHAEFIAIDELLSS 60

Query: 64  --------------------------------------RILSQEILPEVDLYVTLEPCTM 85
                                                 R    E +  +DLYVT+EPC M
Sbjct: 61  SPKVERGDVDENRSVKRKRGESEIECHDEKVDESENSKRSYGPEDMRSLDLYVTIEPCIM 120

Query: 86  CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH--HSP----------------- 126
           CA+ +    IR+++YGA N K GG       +        H                   
Sbjct: 121 CASLLQQFGIRKVWYGAVNDKFGGNGGVLNIHVENGKFDSHDVAEDKAKDGNDQTLDEMR 180

Query: 127 --------EIYPGISEQRSRQIIQDFF 145
                   E+  G   + +  I++ F+
Sbjct: 181 TKKHEGDYEVSGGWLREEAIVILRRFY 207


>gi|120609775|ref|YP_969453.1| CMP/dCMP deaminase [Acidovorax citrulli AAC00-1]
 gi|120588239|gb|ABM31679.1| CMP/dCMP deaminase, zinc-binding protein [Acidovorax citrulli
           AAC00-1]
          Length = 169

 Score =  123 bits (311), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 39/101 (38%), Positives = 54/101 (53%), Gaps = 1/101 (0%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIR 60
           ++   ++  A+  A  A  R   P GAV V  +  +++ A N N E  D TAHAE  AIR
Sbjct: 14  ERDGRYLRHAIALADKARARGNRPFGAVIVGGDGTVLAEAWNANGETGDCTAHAETSAIR 73

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
           +     ++E+L    LY + EPC MCA AI  A I R+ YG
Sbjct: 74  VASPQHAREVLARATLYSSGEPCVMCAGAIFWANIGRVVYG 114


>gi|110636628|ref|YP_676835.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Cytophaga hutchinsonii ATCC 33406]
 gi|110279309|gb|ABG57495.1| bifunctional protein: diaminohydroxyphosphoribosylaminopyrimidine
           deaminase; 5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Cytophaga hutchinsonii ATCC 33406]
          Length = 352

 Score =  123 bits (311), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 39/162 (24%), Positives = 64/162 (39%), Gaps = 26/162 (16%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56
           M     +M  ALE A        +   P VG V V +  II    +   +      HAE+
Sbjct: 1   MDSDERYMRRALELAMLG--SGHVSSNPMVGCVVVKDGHIIGEGYH--EKFGQP--HAEV 54

Query: 57  LAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGI 110
            AI+    +  + +L    LYV LEPC        C+  I   +I R+ +   +P     
Sbjct: 55  HAIQS---VPDKSLLEGSTLYVNLEPCSHYGKTPPCSHLIVDYKIARVVFANIDPNPLVA 111

Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF---KERR 149
             G ++          E+  G+ E+  R++ + FF   + +R
Sbjct: 112 GAGFEYLMSNG----IEVIQGVLEEEGRELNRRFFTYIENKR 149


>gi|119386956|ref|YP_918011.1| CMP/dCMP deaminase, zinc-binding [Paracoccus denitrificans PD1222]
 gi|119377551|gb|ABL72315.1| CMP/dCMP deaminase, zinc-binding protein [Paracoccus denitrificans
           PD1222]
          Length = 157

 Score =  123 bits (311), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 30/106 (28%), Positives = 51/106 (48%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
            +   ++  A+  A         P GAV V + ++++   N      D TAHAE++A+R 
Sbjct: 3   DQAKHYLEQAVMLAHRNVQAGGRPFGAVVVRDGEVLATGVNETVATHDPTAHAELVALRA 62

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKG 107
               L    L    ++ + +PC MC AA+ LA + +++Y  SN  G
Sbjct: 63  AALRLGSPDLSACVVHASGQPCPMCLAAMRLAGVTKVHYAYSNQDG 108


>gi|304440657|ref|ZP_07400541.1| riboflavin biosynthesis protein RibD [Peptoniphilus duerdenii ATCC
           BAA-1640]
 gi|304370844|gb|EFM24466.1| riboflavin biosynthesis protein RibD [Peptoniphilus duerdenii ATCC
           BAA-1640]
          Length = 368

 Score =  123 bits (311), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 44/155 (28%), Positives = 62/155 (40%), Gaps = 20/155 (12%)

Query: 1   MK--KGNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56
           MK      FMS A+E A+N   A +    VG V V N KII    ++         HAE+
Sbjct: 1   MKNLDDRYFMSRAIELAKNGIGATKTNPLVGCVIVRNEKIIGEGYHKVFGSC----HAEV 56

Query: 57  LAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGI 110
            AI         E L    LYV LEPC        CA  I   RI R+  G  +P     
Sbjct: 57  NAINDAKAK--GENLDGATLYVNLEPCSHYGKTPPCADRIIEERITRVVIGNCDPFEKVS 114

Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
             G +       +   E+  G+ ++   ++ + +F
Sbjct: 115 GRGIERLK----NAGIEVEVGVLKEECEKLNERYF 145


>gi|118593750|ref|ZP_01551119.1| hypothetical protein SIAM614_03553 [Stappia aggregata IAM 12614]
 gi|118433660|gb|EAV40323.1| hypothetical protein SIAM614_03553 [Stappia aggregata IAM 12614]
          Length = 189

 Score =  123 bits (311), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 38/158 (24%), Positives = 63/158 (39%), Gaps = 11/158 (6%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNR-NRELKDVTAHAEILAI 59
            K    +  A E A+ A    + P G +    +  ++   GN  + E +D+TAHAE L  
Sbjct: 32  DKDIALLRRAFEIARQARETGDHPFGCLLAGPDGDVLMEQGNGYSAEGQDMTAHAERLLA 91

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASN----PKGGGIENGTQ 115
               +    + L    LY + EPC MC+ A+  A I R+ +G +      + G  E    
Sbjct: 92  TRASKRWRPDFLAGCTLYTSAEPCAMCSGAVYWAGIGRVVFGQTEKSLKEQTGDHEENPT 151

Query: 116 FY-----TLATCHHSPEIYPGISEQRSRQIIQDFFKER 148
                    A      E+   + E  +  +  DF+ E+
Sbjct: 152 LDLPCRTVFAAGQRQVEVVGPLLEDEAASLQADFWAEK 189


>gi|292494136|ref|YP_003533279.1| Cytidine/deoxycytidylate deaminase, zinc-binding region (TBD)
           [Haloferax volcanii DS2]
 gi|291369169|gb|ADE01399.1| Cytidine/deoxycytidylate deaminase, zinc-binding region (TBD)
           [Haloferax volcanii DS2]
          Length = 153

 Score =  123 bits (311), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 34/143 (23%), Positives = 62/143 (43%), Gaps = 1/143 (0%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
                M  + E A+ AA R + P G+V V ++++I R  NR     D+  H E+      
Sbjct: 9   DHERHMRESFELARKAAARGDEPFGSVLVRDDEVIMRDSNRIVTESDIRRHPELQLAYRA 68

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGA-SNPKGGGIENGTQFYTLAT 121
           CR    +    + +Y + EPC MCA  ++ A   R+ YG   +  G    +     + A 
Sbjct: 69  CREYDADERAAMVMYTSTEPCPMCAGGMATAGFARVVYGVGGDEIGEFTGSNPGVRSAAV 128

Query: 122 CHHSPEIYPGISEQRSRQIIQDF 144
                E+   +    +R++ +++
Sbjct: 129 LDAVTEVVGPVLNDEARRVHREY 151


>gi|162451647|ref|YP_001614014.1| cytidine/deoxycytidylate deaminase [Sorangium cellulosum 'So ce
           56']
 gi|161162229|emb|CAN93534.1| Cytidine/deoxycytidylate deaminase [Sorangium cellulosum 'So ce
           56']
          Length = 151

 Score =  123 bits (311), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 42/149 (28%), Positives = 63/149 (42%), Gaps = 9/149 (6%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGA-VAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
           M +    M  ALE A+ A    E P GA VA  +  +++ A +     +D T HAE+ A+
Sbjct: 1   MSRDEALMGRALELARGAQRAGEPPFGALVAAPDGAVVAEATDEVNAQRDFTWHAEVGAV 60

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS----NPKGGGIENGTQ 115
           R  C  +    L    LY T+EPC MC  A  LARI R+ YG +        GG +    
Sbjct: 61  RRACAAVG-PDLQGYTLYTTVEPCPMCFTAAWLARISRIVYGCTMREVTEATGGAQRELA 119

Query: 116 FYTL---ATCHHSPEIYPGISEQRSRQII 141
                         ++  G+ + +   + 
Sbjct: 120 VPAEWMNERSGAPLDLVGGVLDAQCLALF 148


>gi|295088113|emb|CBK69636.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase
           /5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Bacteroides xylanisolvens XB1A]
          Length = 351

 Score =  123 bits (311), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 42/152 (27%), Positives = 64/152 (42%), Gaps = 20/152 (13%)

Query: 1   MKKGNVFMSCALEEAQNAALR--NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           M++   +M   +E A+N          VGAV V N +II    +         AHAE+ A
Sbjct: 7   MEE-EKYMRRCIELAKNGLCNVSPNPMVGAVIVCNGRIIGEGYHIRCGE----AHAEVNA 61

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
           IR    +  + +L    +YV+LEPC        CA  I   +I R+  G  +P       
Sbjct: 62  IRS---VKDESLLKRSTIYVSLEPCSHYGKTPPCADLIIEKQIPRIVIGCQDPFSEVAGR 118

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
           G Q    A      E+  G+ E+  + +I+ F
Sbjct: 119 GIQKLRDAGR----EVTVGVLEEECKSLIRRF 146


>gi|134094405|ref|YP_001099480.1| putative guanine deaminase [Herminiimonas arsenicoxydans]
 gi|133738308|emb|CAL61353.1| Guanine deaminase (Guanase) (Guanine aminase) (Guanine
           aminohydrolase) (GAH) (GDEase) [Herminiimonas
           arsenicoxydans]
          Length = 153

 Score =  123 bits (311), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 32/112 (28%), Positives = 49/112 (43%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
               +  A++ AQ    R   P GAV  ++N++I+   N      D T HAE+ AIR   
Sbjct: 5   HEKMLHQAVQLAQENRERGGRPFGAVLAIDNEVIAVGVNNIVHSHDPTTHAEMEAIRSAS 64

Query: 64  RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
           + L +  L    +Y +  PC MC AA+ L  +  +YY   N         + 
Sbjct: 65  QRLGRPNLKGSVIYASGHPCPMCLAAMVLTGVDAVYYAFDNKDAAPYGFSSD 116


>gi|194291404|ref|YP_002007311.1| guanine deaminase; cytidine and deoxycytidylate deaminase family
           [Cupriavidus taiwanensis LMG 19424]
 gi|193225308|emb|CAQ71250.1| Guanine deaminase; cytidine and deoxycytidylate deaminase family
           [Cupriavidus taiwanensis LMG 19424]
          Length = 155

 Score =  123 bits (311), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 35/108 (32%), Positives = 54/108 (50%), Gaps = 1/108 (0%)

Query: 1   MKKGNVFMSCALEEA-QNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
           M     ++  ++  A +N   RN  P GAV V +  +++RA N      D +AHAE+ A+
Sbjct: 1   MSTTEAYLLDSIRLAMENVRERNTWPFGAVVVKDGTVLARAVNEVDATCDPSAHAEMQAV 60

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKG 107
           R   R L +  L    +Y +  PC MC  A+ LA +  ++Y  SN  G
Sbjct: 61  RAASRALGKPDLSGCTVYASGYPCPMCLTAMYLAGVEAVFYAYSNEDG 108


>gi|332157888|ref|YP_004423167.1| Riboflavin biosynthesis protein ribD (ribD) [Pyrococcus sp. NA2]
 gi|331033351|gb|AEC51163.1| Riboflavin biosynthesis protein ribD (ribD) [Pyrococcus sp. NA2]
          Length = 349

 Score =  123 bits (311), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 44/154 (28%), Positives = 65/154 (42%), Gaps = 18/154 (11%)

Query: 1   MKKGNVFMSCALEEAQNAALR-NEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           MK+   +M  ALE A+    R N  P VGAV V N K+I +  +     K    HAE+ A
Sbjct: 1   MKEDEKYMKLALELARLGEGRVNPNPMVGAVIVKNGKVIGKGHHEYFGGK----HAEVNA 56

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
           I    R  +   +    +YVTLEPC        C   I    I R+     +P       
Sbjct: 57  IEDAKR--NGYSVRGATMYVTLEPCAHWGKQPPCVDRIIKEGISRVVVATLDPNPMVNGE 114

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
           G +    A      E+  GI ++ + ++ + +FK
Sbjct: 115 GVKRLMEAG----IEVEVGILKEEAEKLNEIYFK 144


>gi|293371696|ref|ZP_06618107.1| riboflavin biosynthesis protein RibD [Bacteroides ovatus SD CMC 3f]
 gi|292633393|gb|EFF51963.1| riboflavin biosynthesis protein RibD [Bacteroides ovatus SD CMC 3f]
          Length = 351

 Score =  123 bits (310), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 41/152 (26%), Positives = 64/152 (42%), Gaps = 20/152 (13%)

Query: 1   MKKGNVFMSCALEEAQNAALR--NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           M++   +M   +E A+N          VGAV V + +II    +         AHAE+ A
Sbjct: 7   MEE-EKYMKRCIELAKNGLCNVSPNPMVGAVIVCDGRIIGEGYHIRCGE----AHAEVNA 61

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
           IR    +  + +L    +YV+LEPC        CA  I   +I R+  G  +P       
Sbjct: 62  IRS---VKDESLLKHSTIYVSLEPCSHYGKTPPCANLIIEKQIPRIVIGCQDPFSEVAGR 118

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
           G Q    A      E+  G+ E+  + +I+ F
Sbjct: 119 GIQKLRDAGR----EVTVGVLEEECKSLIRRF 146


>gi|307108051|gb|EFN56292.1| hypothetical protein CHLNCDRAFT_144679 [Chlorella variabilis]
          Length = 250

 Score =  123 bits (310), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 43/120 (35%), Positives = 60/120 (50%), Gaps = 4/120 (3%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM- 61
               FM  AL++A NA   NE+PVG V V +  +++   N+  E ++ T HAE +A+   
Sbjct: 10  DDLRFMRAALQQAANALGENEVPVGCVVVRDGAVVAAGSNKTNETRNGTRHAEFVAVDAL 69

Query: 62  ---GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
                   +    PE  LYVT EPC MCA A+SL R   + YG  N K GG  +    + 
Sbjct: 70  LQQAGGDAAAARFPECHLYVTCEPCIMCAGALSLLRFASVTYGCPNDKFGGNGSILSVHA 129


>gi|261188372|ref|XP_002620601.1| cytosine deaminase [Ajellomyces dermatitidis SLH14081]
 gi|239593201|gb|EEQ75782.1| cytosine deaminase [Ajellomyces dermatitidis SLH14081]
 gi|239609343|gb|EEQ86330.1| cytosine deaminase [Ajellomyces dermatitidis ER-3]
 gi|327354444|gb|EGE83301.1| cytosine deaminase [Ajellomyces dermatitidis ATCC 18188]
          Length = 143

 Score =  123 bits (310), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 38/140 (27%), Positives = 64/140 (45%), Gaps = 13/140 (9%)

Query: 11  ALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQE 69
           ALEEA+ +A    IP+GA  V  + KI+ R  N   +    T H EI A+    R+ +  
Sbjct: 11  ALEEAKKSAAVGGIPIGACLVARDGKILGRGHNMRVQKGSATLHGEIAALENSGRLPAST 70

Query: 70  ILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIY 129
            +    +Y T+ PC MC  A  L +++R+  G +    GG             +   E+ 
Sbjct: 71  YV-GATMYTTMSPCDMCTGACVLYKLKRVVVGENTTFMGG--------EQYLINRGVEVV 121

Query: 130 PGISE-QRSRQIIQDFFKER 148
             + + +   +++Q F +ER
Sbjct: 122 --VLDNKECIEMVQKFIQER 139


>gi|160876335|ref|YP_001555651.1| cytosine deaminase [Shewanella baltica OS195]
 gi|160861857|gb|ABX50391.1| Cytosine deaminase [Shewanella baltica OS195]
 gi|315268524|gb|ADT95377.1| Cytosine deaminase [Shewanella baltica OS678]
          Length = 145

 Score =  123 bits (310), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 35/142 (24%), Positives = 62/142 (43%), Gaps = 10/142 (7%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           + F++ A+EEA+   +   IP+G+V V++ KI+ R  N+  +      HAE+  +    R
Sbjct: 2   DEFLAAAIEEAKQGLVEGGIPIGSVLVIDGKIVGRGHNKRVQKGSSVLHAEMDCLENAGR 61

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
             + E      LY TL PC MC+ A+ L  I ++  G +    G                
Sbjct: 62  FSAAEY-QRATLYSTLSPCDMCSGAVLLYGIPKVIVGENTTFQG--------PEAYVKSR 112

Query: 125 SPEIYPGISEQRSRQIIQDFFK 146
             ++   +     +Q++ DF  
Sbjct: 113 GVDVTV-VDNAECKQLMHDFIA 133


>gi|238925477|ref|YP_002938994.1| riboflavin biosynthesis protein [Eubacterium rectale ATCC 33656]
 gi|238877153|gb|ACR76860.1| riboflavin biosynthesis protein [Eubacterium rectale ATCC 33656]
          Length = 394

 Score =  123 bits (310), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 39/158 (24%), Positives = 60/158 (37%), Gaps = 24/158 (15%)

Query: 3   KGNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
               +M  A+E A+           VGAV V + +II    +          HAE  A+ 
Sbjct: 8   TDEQYMRRAIELAKRGMGYTSPNPMVGAVIVKDGRIIGEGWHERYGEL----HAERNAL- 62

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
                  +E     D+YVTLEPC        C  A+  A I+R+Y G+ +P       G 
Sbjct: 63  ----KHCKESPQGADMYVTLEPCCHHGKQPPCVEAVIEAGIKRVYVGSDDPNPLVAGGGI 118

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF---KERR 149
           +        H  E+   + +    ++   FF   + RR
Sbjct: 119 KILKE----HGIEVVTQVLKDECDRLNDVFFYFIQTRR 152


>gi|310644100|ref|YP_003948858.1| riboflavin biosynthesis protein
           (diaminohydroxyphosphoribosylaminopyrimidine deaminase
           (riboflavin-specific deaminase) and
           5-amino-6-(5-phosphoribosylamino)uracil reductase)
           [Paenibacillus polymyxa SC2]
 gi|309249050|gb|ADO58617.1| Riboflavin biosynthesis protein
           (Diaminohydroxyphosphoribosylaminopyrimidine deaminase
           (Riboflavin-specific deaminase) and
           5-amino-6-(5-phosphoribosylamino)uracil reductase)
           [Paenibacillus polymyxa SC2]
          Length = 366

 Score =  123 bits (310), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 49/152 (32%), Positives = 67/152 (44%), Gaps = 21/152 (13%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           M     +M  ALE A++A  + E  P VG+V V N +I+    +          HAEI A
Sbjct: 1   MNTHEKYMRLALENARSAKGQTEPNPLVGSVIVNNGRIVGIGAHLKPGE----PHAEIHA 56

Query: 59  IRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIEN 112
           +RM       E      +YVTLEPC+       CA AI  A IRR+   A +P       
Sbjct: 57  LRMAG-----EHAQGATIYVTLEPCSHHGRTGPCAEAIVKAGIRRVVIAALDPNPLVSGR 111

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
           G Q    A      E+  G+ EQ S ++ + F
Sbjct: 112 GVQILKDAG----IEVIVGVCEQESIRMNEVF 139


>gi|108757223|ref|YP_632926.1| riboflavin biosynthesis protein RibD [Myxococcus xanthus DK 1622]
 gi|108461103|gb|ABF86288.1| riboflavin biosynthesis protein RibD [Myxococcus xanthus DK 1622]
          Length = 387

 Score =  123 bits (310), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 45/154 (29%), Positives = 67/154 (43%), Gaps = 23/154 (14%)

Query: 5   NVFMSCALEEAQNAALR---NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
             FM  ALEEA     R   N + VGAV V   +II+R  +     K  +AHAE++A+  
Sbjct: 29  EFFMRIALEEAAKGLGRTSPNPV-VGAVLVKGGRIIARGYH----KKAGSAHAEVVALEA 83

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
                        DLY TLEPC        C+ AI  A +RR+   +++P       G  
Sbjct: 84  AGA-----RAKGADLYTTLEPCDHYGRTPPCSMAIIEAGVRRVICASADPNPKVSGKGVS 138

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
               A      ++  G+  + + ++ + FFK  R
Sbjct: 139 RMRRAGL----KVLTGVLAEDADRLNRPFFKMIR 168


>gi|213962287|ref|ZP_03390550.1| riboflavin biosynthesis protein RibD [Capnocytophaga sputigena
           Capno]
 gi|213954953|gb|EEB66272.1| riboflavin biosynthesis protein RibD [Capnocytophaga sputigena
           Capno]
          Length = 323

 Score =  123 bits (310), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 39/133 (29%), Positives = 60/133 (45%), Gaps = 20/133 (15%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC-- 83
           VG V V + KII    ++         HAE+ AI     +  + +L E  LYV+LEPC  
Sbjct: 22  VGCVIVHDGKIIGEGWHQKAGE----PHAEVRAI---ASVKDKSLLAESTLYVSLEPCNH 74

Query: 84  ----TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139
                 CA  I   RI R+  G ++P       G +    A C    E+  G+ E+  R+
Sbjct: 75  YGKTPPCADLIITHRIPRVVIGTTDPFAKVAGRGIEKLRDAGC----EVTVGVMEKECRE 130

Query: 140 IIQDFF---KERR 149
           + + FF   +++R
Sbjct: 131 LNKRFFTFHEKKR 143


>gi|167762046|ref|ZP_02434173.1| hypothetical protein BACSTE_00394 [Bacteroides stercoris ATCC
           43183]
 gi|167700138|gb|EDS16717.1| hypothetical protein BACSTE_00394 [Bacteroides stercoris ATCC
           43183]
          Length = 347

 Score =  123 bits (310), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 42/152 (27%), Positives = 61/152 (40%), Gaps = 20/152 (13%)

Query: 1   MKKGNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           M++   +M   ++ AQN          VGAV V + KII    +         AHAE+ A
Sbjct: 1   MEE-EKYMRRCIQLAQNGLCNAAPNPMVGAVIVCDGKIIGEGYHVRCGE----AHAEVNA 55

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
           IR    +    +L    +YV+LEPC        CA  I    I R+  G  +P       
Sbjct: 56  IRS---VKDPSLLKRSTIYVSLEPCAHYGKTPPCADLIIEKEIPRIVIGCQDPFAKVAGR 112

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
           G +    A      E+  G+ E   R +I+ F
Sbjct: 113 GIRKLKDAGR----EVITGVLEDECRSLIRRF 140


>gi|32473097|ref|NP_866091.1| cytidine and deoxycytidylate deaminase family protein
           [Rhodopirellula baltica SH 1]
 gi|32397776|emb|CAD73777.1| probable cytidine and deoxycytidylate deaminase family protein
           [Rhodopirellula baltica SH 1]
          Length = 165

 Score =  123 bits (310), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 41/142 (28%), Positives = 56/142 (39%), Gaps = 7/142 (4%)

Query: 6   VFMSCALEEAQNAALRNEIPVGA-VAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
            +M   +          E P GA V   + K I+ A N+     D TAHAE++AI    +
Sbjct: 14  QWMKSVVTMTIEGVAMGEHPFGAGVFTDSGKQIAVAHNQVVSRCDPTAHAEVMAIGKAAK 73

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS-----NPKGGGIENGTQFYTL 119
            L    L  + L  T EPC MC AAI LA I  + YGAS         G +         
Sbjct: 74  KLGDPDLSGLWLVSTGEPCPMCLAAIGLAGIEHVAYGASASTIETANFGTLGLTASELAE 133

Query: 120 ATCHHSPEIYPGISEQRSRQII 141
                  ++  GI E     ++
Sbjct: 134 -QLSPPIQLTGGILEYDCSALL 154


>gi|326406537|gb|ADZ63608.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
           5-amino-6-5-phosphoribosylamino uracil reductase
           [Lactococcus lactis subsp. lactis CV56]
          Length = 362

 Score =  123 bits (309), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 41/155 (26%), Positives = 59/155 (38%), Gaps = 25/155 (16%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEI-P---VGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56
           MKK   +M  A+  A+       + P   VGA+ V   +II +  +         AHAEI
Sbjct: 1   MKKDEYYMDLAIVLAKKGG--GNVNPNPQVGALIVKEGRIIGQGYHEKYGK----AHAEI 54

Query: 57  LAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGI 110
            A          E      LYVTLEPC        C  AI    I+R+  G  +P     
Sbjct: 55  NAF-----KDCNESPEGAMLYVTLEPCAHQGKQPPCFEAIIKNGIKRVVIGHLDPNPLVS 109

Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
             G +    A      E+   + E+   ++ + FF
Sbjct: 110 GKGIKAMREAG----IEVSLNVLEKECEELNKIFF 140


>gi|238921881|ref|YP_002935395.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Eubacterium
           eligens ATCC 27750]
 gi|238873553|gb|ACR73261.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Eubacterium
           eligens ATCC 27750]
          Length = 373

 Score =  123 bits (309), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 40/156 (25%), Positives = 61/156 (39%), Gaps = 21/156 (13%)

Query: 2   KKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
           K+   +M  A+E A+N     N  P VGAV V +++II    +R         HAE  A+
Sbjct: 11  KQDEFYMRRAIELAKNGTGWVNPNPLVGAVIVKDDRIIGEGWHRKYGEL----HAERDAL 66

Query: 60  RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113
                    E      +YVTLEPC        C  A+  A I R+  G+ +P       G
Sbjct: 67  -----SRCMEDTSGATIYVTLEPCCHHGKQPPCTEALVQAGISRVVIGSMDPNPLVSGKG 121

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
            ++       H  ++   +  +    +   FF   R
Sbjct: 122 VKYLEE----HGIKVEGCVCNEECLAMNYVFFHYIR 153


>gi|237742612|ref|ZP_04573093.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase
           [Fusobacterium sp. 4_1_13]
 gi|229430260|gb|EEO40472.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase
           [Fusobacterium sp. 4_1_13]
          Length = 369

 Score =  123 bits (309), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 39/153 (25%), Positives = 62/153 (40%), Gaps = 25/153 (16%)

Query: 4   GNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
              +M+ A+E A+       +   P VGAV V + KII    ++         HAE+ A+
Sbjct: 6   DEKYMARAIELAKRG--IGGVNPNPLVGAVIVKDGKIIGEGWHKKFGG----PHAEVWAL 59

Query: 60  RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113
                   +E      +YVTLEPC        CA  I  A I+R      +P       G
Sbjct: 60  NEA-----EENAEGATIYVTLEPCSHQGKTPPCAKRIVEAGIKRCVVACIDPNPLVAGKG 114

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
            +       +    +  G+ E+ +++I + FFK
Sbjct: 115 IKIIE----NAGITVKLGVLEKEAKEINKIFFK 143


>gi|325299195|ref|YP_004259112.1| riboflavin biosynthesis protein RibD [Bacteroides salanitronis DSM
           18170]
 gi|324318748|gb|ADY36639.1| riboflavin biosynthesis protein RibD [Bacteroides salanitronis DSM
           18170]
          Length = 356

 Score =  123 bits (309), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 41/154 (26%), Positives = 64/154 (41%), Gaps = 23/154 (14%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP----VGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56
           M +   ++S  ++ A+N       P    VGAV V  ++II    +          HAE+
Sbjct: 1   MTQDEKYISRCIQLAKNGLC--NTPPNPMVGAVIVYQDRIIGEGYHIRCGEG----HAEV 54

Query: 57  LAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGI 110
            AI     +  + +L +  LYV+LEPC        CA  I    I R+  G ++P     
Sbjct: 55  NAI---ASVKDESLLRQSTLYVSLEPCSHYGKTPPCADLIIRKGIPRVVVGCTDPFPLVS 111

Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
             G Q    A      E+  G+ EQ  + +I+ F
Sbjct: 112 GRGIQKLRDAG----VEVKVGVLEQECKDLIRRF 141


>gi|291527733|emb|CBK93319.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase
           /5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Eubacterium rectale M104/1]
          Length = 388

 Score =  123 bits (309), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 38/158 (24%), Positives = 61/158 (38%), Gaps = 24/158 (15%)

Query: 3   KGNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
               +M  A+E A+           VGAV V + +II    +          HAE  A+ 
Sbjct: 2   TDEQYMRRAIELAKRGMGYTSPNPMVGAVIVKDGRIIGEGWHERYGEL----HAERNAL- 56

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
                  +E     ++YVTLEPC        C  A+  A I+R+Y G+ +P       G 
Sbjct: 57  ----KHCKESPQGAEMYVTLEPCCHHGKQPPCVEAVIEAGIKRVYVGSDDPNPLVAGGGI 112

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF---KERR 149
           +        H  E+   + +    ++ + FF   + RR
Sbjct: 113 KILKE----HGIEVVTQVLKDECDRLNEVFFYFIQTRR 146


>gi|254562307|ref|YP_003069402.1| Guanine deaminase [Methylobacterium extorquens DM4]
 gi|254269585|emb|CAX25555.1| Guanine deaminase (Guanase) (Guanine aminase) (Guanine
          aminohydrolase) (GAH) (GDEase) [Methylobacterium
          extorquens DM4]
          Length = 153

 Score =  123 bits (309), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 32/99 (32%), Positives = 51/99 (51%)

Query: 1  MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
          M     ++  A E A         P GAV V + ++++RA NR     D + HAE++AIR
Sbjct: 1  MPDHESYLREATEIALANVAEGGRPYGAVIVRDGEVVARAANRIHATNDPSDHAEMVAIR 60

Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLY 99
             + L +  L +  +Y +  PC MC AA+ LA +++ Y
Sbjct: 61 AASQQLGRPKLDDCIVYASGRPCPMCHAAMRLAGVKQGY 99


>gi|295398347|ref|ZP_06808389.1| riboflavin biosynthesis protein RibD [Aerococcus viridans ATCC
           11563]
 gi|294973486|gb|EFG49271.1| riboflavin biosynthesis protein RibD [Aerococcus viridans ATCC
           11563]
          Length = 364

 Score =  123 bits (309), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 40/152 (26%), Positives = 61/152 (40%), Gaps = 21/152 (13%)

Query: 1   MKKGNVFMSCALEEAQ--NAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           MK    +M  AL+ A+      R+   VGAV V N++II R  ++         HAE  A
Sbjct: 1   MKD---YMQEALDLAELGQGWTRSNPMVGAVIVKNSQIIGRGYHQQYGGL----HAEREA 53

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
           ++          +    +YVTLEPC        C  AI    I ++   A +P       
Sbjct: 54  LKDANE--QGHDVKGATMYVTLEPCCHFGKTPPCTQAIIEGGIEKVVVAAIDPNPLVAGK 111

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
           G Q       +H  E+  G+  + S  + + F
Sbjct: 112 GIQELR----NHHIEVETGLLAEESEDLNRKF 139


>gi|255658129|ref|ZP_05403538.1| riboflavin biosynthesis protein RibD [Mitsuokella multacida DSM
           20544]
 gi|260849436|gb|EEX69443.1| riboflavin biosynthesis protein RibD [Mitsuokella multacida DSM
           20544]
          Length = 363

 Score =  123 bits (309), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 48/152 (31%), Positives = 67/152 (44%), Gaps = 21/152 (13%)

Query: 3   KGNVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +   FM  ALE A+NA  R      VGAV V   +I++   +R    K  T HAEI A+R
Sbjct: 2   QDEEFMREALELARNAEGRTSPNPMVGAVIVQGGRIVAAGWHR----KAGTPHAEIHALR 57

Query: 61  MGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGT 114
           M   +          LYVTLEPC+       CA A+  A I+R      +P       G 
Sbjct: 58  MAGELA-----KGATLYVTLEPCSHYGRTGPCAKAVVEAGIKRCVIAMKDPNPLVAGRGI 112

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
           +    A      E   G+ E+ +R++ + F K
Sbjct: 113 KILEDAG----VETVCGVLEEEARRLNEVFLK 140


>gi|241956270|ref|XP_002420855.1| cytosine aminohydrolase, putative; cytosine deaminase, putative
           [Candida dubliniensis CD36]
 gi|223644198|emb|CAX41008.1| cytosine aminohydrolase, putative [Candida dubliniensis CD36]
          Length = 150

 Score =  123 bits (309), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 29/149 (19%), Positives = 58/149 (38%), Gaps = 15/149 (10%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVG-AVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
                +  AL++A+ +     IP+G  +   +  ++ +  N   +      H E+ A+  
Sbjct: 4   DDKKGLQIALDQAKKSYFEGGIPIGSCIISSDGTVLGQGHNERIQKHSSILHGEMSALEN 63

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
             R+  +    +  +Y TL PC+MC  AI L   +R+  G              F     
Sbjct: 64  AGRLPGKTY-KDCTIYTTLSPCSMCTGAILLYGFKRVVMGE----------NVNFLGNEK 112

Query: 122 C--HHSPEIYPGISEQRSRQIIQDFFKER 148
               +  E+   +++Q    ++  F KE+
Sbjct: 113 LLVENGVEVV-NLNDQACIDLMAKFIKEK 140


>gi|329956196|ref|ZP_08296876.1| riboflavin biosynthesis protein RibD [Bacteroides clarus YIT 12056]
 gi|328524670|gb|EGF51731.1| riboflavin biosynthesis protein RibD [Bacteroides clarus YIT 12056]
          Length = 347

 Score =  123 bits (309), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 44/152 (28%), Positives = 63/152 (41%), Gaps = 20/152 (13%)

Query: 1   MKKGNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           M++   +M   ++ AQN          VGAV V + KII    +         AHAE+ A
Sbjct: 1   MEE-EKYMRRCIQLAQNGLCNAAPNPMVGAVVVCDGKIIGEGYHVRCGE----AHAEVNA 55

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
           IR    +    +L    +YV+LEPC        CA  I   +I R+  G  +P       
Sbjct: 56  IRS---VKEPSLLKRSTIYVSLEPCSHYGKTPPCADLIIEKQIPRIVIGCQDPFAKVAGR 112

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
           G Q    A      E+  G+ EQ  R +I+ F
Sbjct: 113 GIQKLKDAGR----EVTVGVLEQECRNLIRRF 140


>gi|325103646|ref|YP_004273300.1| riboflavin biosynthesis protein RibD [Pedobacter saltans DSM 12145]
 gi|324972494|gb|ADY51478.1| riboflavin biosynthesis protein RibD [Pedobacter saltans DSM 12145]
          Length = 347

 Score =  123 bits (309), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 40/157 (25%), Positives = 63/157 (40%), Gaps = 22/157 (14%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56
           M   ++FM  A++ A   A    +   P VGAV   + +II    ++        +HAE+
Sbjct: 1   MTNDSIFMQRAIDLALLGA--GSVSPNPMVGAVVAHDGQIIGEGYHKKYGE----SHAEV 54

Query: 57  LAIRMGCRILSQEI--LPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGG 108
            AI+            L +  +YVTLEPC        CA  I    I R+  G  +P   
Sbjct: 55  NAIQNVIDNFKNADHLLKQSTIYVTLEPCAHYGKTPPCADLIIKHCIPRIVIGCRDPFDS 114

Query: 109 GIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
               G +   +A      E+  G+ E    ++ + FF
Sbjct: 115 VNGKGIEKLLIAG----KEVITGVLETECLELNRRFF 147


>gi|224025262|ref|ZP_03643628.1| hypothetical protein BACCOPRO_01999 [Bacteroides coprophilus DSM
           18228]
 gi|224018498|gb|EEF76496.1| hypothetical protein BACCOPRO_01999 [Bacteroides coprophilus DSM
           18228]
          Length = 306

 Score =  123 bits (309), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 39/152 (25%), Positives = 63/152 (41%), Gaps = 19/152 (12%)

Query: 1   MKKGNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           M K   ++   ++ A+N          VGAV V  ++II    +          HAE+ A
Sbjct: 1   MTKDEKYIRRCIQLARNGLCNAAPNPMVGAVVVYRDRIIGEGYHARCGEG----HAEVNA 56

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
           +R    +  + +L E  LYV+LEPC        CA  I    I R+  G  +P       
Sbjct: 57  LRS---VRDESLLKEATLYVSLEPCSHYGKTPPCADLIVSKGIPRVVVGCMDPFPLVAGR 113

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
           G +    A      ++  G+ E+  R++I+ F
Sbjct: 114 GIRKLEEAG----IDVTVGVLEEECRELIRRF 141


>gi|257067316|ref|YP_003153571.1| cytosine/adenosine deaminase [Brachybacterium faecium DSM 4810]
 gi|256558134|gb|ACU83981.1| cytosine/adenosine deaminase [Brachybacterium faecium DSM 4810]
          Length = 175

 Score =  122 bits (308), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 33/148 (22%), Positives = 59/148 (39%), Gaps = 12/148 (8%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           +    F+S A+E+A+ +     +P+GAV V + K+++   N+  +      H E   I  
Sbjct: 8   EDDRRFLSLAIEQARKSWDEGGVPIGAVLVHDGKVLAAGHNQRVQKDSAILHGETDTIEK 67

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
             R+ +  +  E  LY TL PC MCA    L  I R+  G +       E          
Sbjct: 68  AGRLRAS-VYRESVLYTTLSPCIMCAGTALLYEIPRIVIGENR----AFEMSEALLRERG 122

Query: 122 CHHSPEIYPGISEQ-RSRQIIQDFFKER 148
                 +   + +     ++++    ER
Sbjct: 123 ------VAVDVLDDPECIELMERMIAER 144


>gi|317056285|ref|YP_004104752.1| riboflavin biosynthesis protein RibD [Ruminococcus albus 7]
 gi|315448554|gb|ADU22118.1| riboflavin biosynthesis protein RibD [Ruminococcus albus 7]
          Length = 369

 Score =  122 bits (308), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 40/153 (26%), Positives = 59/153 (38%), Gaps = 22/153 (14%)

Query: 4   GNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
              FM  AL  A+       +   P VGAV V +  II+   ++         HAE  A 
Sbjct: 3   HEDFMREALALAEKGM--GHVSPNPMVGAVIVRDGNIIASGYHKRYGDL----HAERSAF 56

Query: 60  RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113
                          D+YVTLEPC        C  A+    I+R++ G+S+P       G
Sbjct: 57  --AECDAKDIDCRGADMYVTLEPCCHHGKQPPCTDAVIEHGIKRVFVGSSDPNPLVAGKG 114

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
           T         H  E+  G+ +    ++ + FFK
Sbjct: 115 TAILRE----HGIEVTEGVLKDECDRLNEIFFK 143


>gi|294793755|ref|ZP_06758892.1| riboflavin biosynthesis protein RibD [Veillonella sp. 3_1_44]
 gi|294455325|gb|EFG23697.1| riboflavin biosynthesis protein RibD [Veillonella sp. 3_1_44]
          Length = 403

 Score =  122 bits (308), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 41/151 (27%), Positives = 61/151 (40%), Gaps = 21/151 (13%)

Query: 3   KGNVFMSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
              V+M  A+E A+ A       P VGAV V +N II    +     K  TAHAE+ A+ 
Sbjct: 2   DDVVYMKRAIELAKLATGHTSPNPLVGAVVVKDNTIIGEGYHH----KAGTAHAEVHALN 57

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
                   +      LYVTLEPC        CA  I  A I ++  G+++P       G 
Sbjct: 58  QAG-----DNAKGATLYVTLEPCSHYGKTPPCALRIIEAGIAKVIVGSTDPNPLVSGKGM 112

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
           +    A      ++   +      ++ + FF
Sbjct: 113 ELLREAG----IKVVCPVCSDECAELNEHFF 139


>gi|300856157|ref|YP_003781141.1| putative purine deaminase, zinc-binding domain [Clostridium
           ljungdahlii DSM 13528]
 gi|300436272|gb|ADK16039.1| putative purine deaminase, zinc-binding domain [Clostridium
           ljungdahlii DSM 13528]
          Length = 163

 Score =  122 bits (308), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 34/101 (33%), Positives = 47/101 (46%), Gaps = 1/101 (0%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIR 60
           K    ++  A E A+N+      P GA+ V  +  I+    N      D T HAE   +R
Sbjct: 4   KDHLYYLRRANEIAKNSREHGNTPFGALLVDKDGNILLEQENIEISTGDCTGHAEASLMR 63

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
              +  S+E L E  LY T EPC MC+ AI    +R + YG
Sbjct: 64  RASQKYSKEFLAECTLYTTFEPCVMCSGAIYWGNVRTVVYG 104


>gi|83589766|ref|YP_429775.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase /
           diaminohydroxyphosphoribosylaminopyrimidine deaminase
           [Moorella thermoacetica ATCC 39073]
 gi|83572680|gb|ABC19232.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Moorella
           thermoacetica ATCC 39073]
          Length = 376

 Score =  122 bits (308), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 43/152 (28%), Positives = 66/152 (43%), Gaps = 21/152 (13%)

Query: 3   KGNVFMSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +  +FM+ ALE A+    R    P VGAV V + +++    ++    K  T HAEI A+R
Sbjct: 4   QDAIFMARALELARQGLGRTSPNPTVGAVIVRDGQVVGEGYHQ----KAGTPHAEIHALR 59

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
                          LYVTLEPC        C  AI  A I+R+    ++P       G 
Sbjct: 60  AAGEKA-----RGATLYVTLEPCCHYGRTPPCTEAIIAAGIKRVVAAMADPNPRVAGGGF 114

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
           +  + A      E+  G+    +R++ + F K
Sbjct: 115 RALSQAG----IEVETGLLADEARRLNEAFIK 142


>gi|218131999|ref|ZP_03460803.1| hypothetical protein BACEGG_03622 [Bacteroides eggerthii DSM 20697]
 gi|217985875|gb|EEC52215.1| hypothetical protein BACEGG_03622 [Bacteroides eggerthii DSM 20697]
          Length = 347

 Score =  122 bits (308), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 42/152 (27%), Positives = 63/152 (41%), Gaps = 20/152 (13%)

Query: 1   MKKGNVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           M++   +M   ++ AQN          VGAV V + KII    +         AHAE+ A
Sbjct: 1   MEE-EKYMRRCIQLAQNGLCNTAPNPMVGAVIVCDGKIIGEGYHIRCGE----AHAEVNA 55

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
           IR    +    +L    +YV+LEPC        CA  I   +I R+  G  +P       
Sbjct: 56  IRS---VKEPSLLKRSTIYVSLEPCAHYGKTPPCADLIIEKQIPRIVIGCQDPFAKVAGR 112

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
           G Q    A      E+  G+ E+  + +I+ F
Sbjct: 113 GIQKLKDAGR----EVIVGVLEEDCKNLIRRF 140


>gi|291524228|emb|CBK89815.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase
           /5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Eubacterium rectale DSM 17629]
          Length = 386

 Score =  122 bits (308), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 39/158 (24%), Positives = 60/158 (37%), Gaps = 24/158 (15%)

Query: 3   KGNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
               +M  A+E A+           VGAV V + +II    +          HAE  A+ 
Sbjct: 2   TDEQYMRRAIELAKRGMGYTSPNPMVGAVIVKDGRIIGEGWHERYGEL----HAERNAL- 56

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
                  +E     D+YVTLEPC        C  A+  A I+R+Y G+ +P       G 
Sbjct: 57  ----KHCKESPQGADMYVTLEPCCHHGKQPPCVEAVIEAGIKRVYVGSDDPNPLVAGGGI 112

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF---KERR 149
           +        H  E+   + +    ++   FF   + RR
Sbjct: 113 KILKE----HGIEVVTQVLKDECDRLNDVFFYFIQTRR 146


>gi|295104352|emb|CBL01896.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase
           /5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Faecalibacterium prausnitzii SL3/3]
          Length = 374

 Score =  122 bits (307), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 37/151 (24%), Positives = 56/151 (37%), Gaps = 21/151 (13%)

Query: 3   KGNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
               +M  AL+ A+           VGAV V   +II +  ++        AHAE  A+ 
Sbjct: 2   NDKEYMRLALQLAKKGCGWTSPNPMVGAVVVKEGRIIGQGWHQRYGQ----AHAERNAL- 56

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
                   E      LYVTLEPC        C  AI  A I R+  G+++P       G 
Sbjct: 57  ----ASCTEDPQGATLYVTLEPCCHYGKQPPCVDAILDAGIHRVVVGSADPNPLVAGKGI 112

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
                    H  ++   + ++    + + FF
Sbjct: 113 AILRA----HGIDVTENVLQEECDALNKVFF 139


>gi|313114897|ref|ZP_07800395.1| riboflavin biosynthesis protein RibD [Faecalibacterium cf.
           prausnitzii KLE1255]
 gi|310622774|gb|EFQ06231.1| riboflavin biosynthesis protein RibD [Faecalibacterium cf.
           prausnitzii KLE1255]
          Length = 374

 Score =  122 bits (307), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 37/151 (24%), Positives = 56/151 (37%), Gaps = 21/151 (13%)

Query: 3   KGNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
               +M  AL+ A+           VGAV V   +II +  ++        AHAE  A+ 
Sbjct: 2   NDKEYMRLALQLAKKGCGWTSPNPMVGAVVVKEGRIIGQGWHQRYGQ----AHAERNAL- 56

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
                   E      LYVTLEPC        C  AI  A I R+  G+++P       G 
Sbjct: 57  ----ASCTEDPQGATLYVTLEPCCHYGKQPPCVDAILDAGIHRVVVGSADPNPLVAGKGI 112

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
                    H  ++   + ++    + + FF
Sbjct: 113 AILRA----HGIDVTENVLQEECDALNKVFF 139


>gi|160944654|ref|ZP_02091881.1| hypothetical protein FAEPRAM212_02168 [Faecalibacterium prausnitzii
           M21/2]
 gi|158443838|gb|EDP20842.1| hypothetical protein FAEPRAM212_02168 [Faecalibacterium prausnitzii
           M21/2]
          Length = 374

 Score =  122 bits (307), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 37/151 (24%), Positives = 56/151 (37%), Gaps = 21/151 (13%)

Query: 3   KGNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
               +M  AL+ A+           VGAV V   +II +  ++        AHAE  A+ 
Sbjct: 2   NDKEYMRLALQLAKKGCGWTSPNPMVGAVVVKEGRIIGQGWHQRYGQ----AHAERNAL- 56

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
                   E      LYVTLEPC        C  AI  A I R+  G+++P       G 
Sbjct: 57  ----ASCTEDPQGATLYVTLEPCCHYGKQPPCVDAILDAGIHRVVVGSADPNPLVAGKGI 112

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
                    H  ++   + ++    + + FF
Sbjct: 113 AILRA----HGIDVTENVLQEECDALNKVFF 139


>gi|317474402|ref|ZP_07933676.1| riboflavin biosynthesis protein RibD [Bacteroides eggerthii
           1_2_48FAA]
 gi|316909083|gb|EFV30763.1| riboflavin biosynthesis protein RibD [Bacteroides eggerthii
           1_2_48FAA]
          Length = 347

 Score =  122 bits (307), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 42/152 (27%), Positives = 63/152 (41%), Gaps = 20/152 (13%)

Query: 1   MKKGNVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           M++   +M   ++ AQN          VGAV V + KII    +         AHAE+ A
Sbjct: 1   MEE-EKYMRRCIQLAQNGLCNTAPNPMVGAVIVCDGKIIGEGYHIRCGE----AHAEVNA 55

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
           IR    +    +L    +YV+LEPC        CA  I   +I R+  G  +P       
Sbjct: 56  IRS---VKEPSLLKRSTIYVSLEPCAHYGKTPPCADLIIEKQIPRIVIGCQDPFAKVAGR 112

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
           G Q    A      E+  G+ E+  + +I+ F
Sbjct: 113 GIQKLKDAGR----EVIVGVLEEDCKNLIRRF 140


>gi|301064689|ref|ZP_07205078.1| riboflavin biosynthesis protein RibD [delta proteobacterium NaphS2]
 gi|300441231|gb|EFK05607.1| riboflavin biosynthesis protein RibD [delta proteobacterium NaphS2]
          Length = 369

 Score =  122 bits (307), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 38/153 (24%), Positives = 60/153 (39%), Gaps = 22/153 (14%)

Query: 1   MKK-GNVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57
           M+K    FM  A++EA+    R      VGAV V   ++++   ++  +      HAE+ 
Sbjct: 1   MEKNDTHFMKLAVKEARKGLGRTSPNPAVGAVIVKEGRVVASGFHK--QAGMP--HAEVE 56

Query: 58  AIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIE 111
           A R           P   LYVTLEPC        C   I  + ++R+  G  +P      
Sbjct: 57  AFRKVGN-----RAPGATLYVTLEPCNHHGKTPPCTELILKSGVKRVVVGMRDPNPLVTG 111

Query: 112 NGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
            G  +          E+  GI E    ++ + F
Sbjct: 112 GGCDYLEKKGL----EVVTGILEDECIRLNEAF 140


>gi|171915861|ref|ZP_02931331.1| riboflavin biosynthesis protein RibD [Verrucomicrobium spinosum DSM
           4136]
          Length = 354

 Score =  122 bits (307), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 35/150 (23%), Positives = 60/150 (40%), Gaps = 16/150 (10%)

Query: 3   KGNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +   +M  AL EA+           VGAV V   ++I +  +          HAE+ A+R
Sbjct: 5   EDEKWMRLALAEARRGIGLTSPNPAVGAVLVNEGRLIGQGWHHRVGQ----PHAEVEALR 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGT 114
                     +     YVTLEPC+       C  A++ A + R+ YGA++P  G      
Sbjct: 61  NAEANGHGAEIRGATAYVTLEPCSTHGRTGACTVALAKAGVSRVVYGATDPNPGHAGAAD 120

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
           +    A       +  G+  +   ++++ F
Sbjct: 121 RLLQEAG----IAVLSGVLREECEEVLRPF 146


>gi|308070849|ref|YP_003872454.1| riboflavin biosynthesis protein ribD [Paenibacillus polymyxa E681]
 gi|305860128|gb|ADM71916.1| Riboflavin biosynthesis protein ribD [Paenibacillus polymyxa E681]
          Length = 366

 Score =  122 bits (307), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 49/152 (32%), Positives = 67/152 (44%), Gaps = 21/152 (13%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           M     +M  ALE A++A  + E  P VG+V V N +I+    +          HAEI A
Sbjct: 1   MTTHEKYMRLALENARSAKGQTEPNPLVGSVIVNNGRIVGIGAHLKPGE----PHAEIHA 56

Query: 59  IRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIEN 112
           +RM       E      +YVTLEPC+       CA AI  A IRR+   A +P       
Sbjct: 57  LRMAG-----EHAQGATIYVTLEPCSHHGRTGPCAEAIVKAGIRRVVIAALDPNPLVSGR 111

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
           G Q    A      E+  G+ EQ S ++ + F
Sbjct: 112 GVQILKDAG----IEVIVGVCEQESIRMNEVF 139


>gi|121702783|ref|XP_001269656.1| cytosine deaminase, putative [Aspergillus clavatus NRRL 1]
 gi|119397799|gb|EAW08230.1| cytosine deaminase, putative [Aspergillus clavatus NRRL 1]
          Length = 148

 Score =  121 bits (306), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 37/150 (24%), Positives = 63/150 (42%), Gaps = 14/150 (9%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAI 59
           M++   F+  A+EEA+       +P+GA  V  + KI+ R  N   +      HAE+ A+
Sbjct: 1   MEQDPGFI-AAVEEAKKGLAEGGVPIGAALVSKDGKILGRGHNMRVQKGSAVLHAEMAAL 59

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
               R+          +Y TL PC MC  A  L  ++R+  G +    GG E        
Sbjct: 60  EDSGRLPGSAY-EGATMYTTLSPCDMCTGACILYNVKRVVIGENKNFVGGEEYLLSRGR- 117

Query: 120 ATCHHSPEIYPGISE-QRSRQIIQDFFKER 148
                  E+   + + +  ++ +  F KE+
Sbjct: 118 -------EVV--VLDNEECKEFMGAFIKEK 138


>gi|289549140|ref|YP_003474128.1| riboflavin biosynthesis protein RibD [Thermocrinis albus DSM 14484]
 gi|289182757|gb|ADC90001.1| riboflavin biosynthesis protein RibD [Thermocrinis albus DSM 14484]
          Length = 353

 Score =  121 bits (306), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 40/146 (27%), Positives = 62/146 (42%), Gaps = 21/146 (14%)

Query: 8   MSCALEEAQ--NAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M  ALE A+           VG V V + KIIS   +          HAE++A+    + 
Sbjct: 1   MGRALELARLRKGLTHPNPTVGCVVVKDGKIISEGYHERAGA----PHAEVVALSKAGQ- 55

Query: 66  LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
                  +  LYVTLEPC        C  AI  A ++R+     +P    + +G +    
Sbjct: 56  ----NAKDSTLYVTLEPCSHYGRTPPCTNAIIEAGVKRVVVATLDPNPKVMGSGIERLRA 111

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFF 145
           A      ++  G+ E+ +RQ+ +DFF
Sbjct: 112 AG----IQVDVGVLEEEARQLNEDFF 133


>gi|269121379|ref|YP_003309556.1| riboflavin biosynthesis protein RibD [Sebaldella termitidis ATCC
           33386]
 gi|268615257|gb|ACZ09625.1| riboflavin biosynthesis protein RibD [Sebaldella termitidis ATCC
           33386]
          Length = 363

 Score =  121 bits (306), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 38/151 (25%), Positives = 61/151 (40%), Gaps = 21/151 (13%)

Query: 4   GNVFMSCALEEAQNAALR-NEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
              +M  ALE A+      N  P VGAV V +  ++ +  +          HAE+ A+  
Sbjct: 2   DKKYMEMALEIAEKGLGHVNPNPLVGAVVVKDGTVVGKGYHGVYGG----PHAEVYALDE 57

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
             +          D+YVTLEPC        CA  I  + I+R + G+ +P       G +
Sbjct: 58  AGKSA-----EGADIYVTLEPCSHYGKTPPCAKKIIESGIKRCFVGSIDPNPLVSGKGIE 112

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
                      E++ G+ ++    I + FFK
Sbjct: 113 MLKEND----IEVHTGVLKEECDNINKAFFK 139


>gi|187735315|ref|YP_001877427.1| riboflavin biosynthesis protein RibD [Akkermansia muciniphila ATCC
           BAA-835]
 gi|187425367|gb|ACD04646.1| riboflavin biosynthesis protein RibD [Akkermansia muciniphila ATCC
           BAA-835]
          Length = 356

 Score =  121 bits (306), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 41/151 (27%), Positives = 66/151 (43%), Gaps = 16/151 (10%)

Query: 2   KKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
            + + +M+ A++ A N   L +  P VGAV V  N++I    ++   L     HAE  AI
Sbjct: 10  NQDDCWMNMAIKLASNGIGLTSPNPCVGAVIVHENQVIGSGFHKKAGL----PHAEREAI 65

Query: 60  RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113
             G    +  +  +  LYVTLEPC        C  AI   R +R+ YG+ +P        
Sbjct: 66  ADGVANGNAPLFADSTLYVTLEPCSTSGKTPPCTDAILKYRFKRVVYGSEDPNPKHRGAA 125

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
                 A      ++  G+ E+   ++I+ F
Sbjct: 126 ADILEQAG----IKVTRGVLEKECDRLIRRF 152


>gi|312977170|ref|ZP_07788918.1| riboflavin biosynthesis protein RibD [Lactobacillus crispatus
           CTV-05]
 gi|310895601|gb|EFQ44667.1| riboflavin biosynthesis protein RibD [Lactobacillus crispatus
           CTV-05]
          Length = 355

 Score =  121 bits (306), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 41/153 (26%), Positives = 66/153 (43%), Gaps = 21/153 (13%)

Query: 1   MKKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           M+K N +M+ ALEEA+       + P VGAV V N ++++   + +        HAE  A
Sbjct: 4   MEKDNFYMNLALEEAKKGRYQTWKNPMVGAVIVKNGQVLATGYHHHYGQN----HAERDA 59

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
           I      L+ E L    LYVTLEPC        C+  I  + I+R+  G  +P       
Sbjct: 60  I----SKLTPEQLFNSTLYVTLEPCNHYGKQPPCSDLIIKSGIKRVVVGQIDPHKLVTGK 115

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
           G             ++  G+    + ++ + F+
Sbjct: 116 GIAKLQENG----VQVTTGVLADDASKLNK-FY 143


>gi|225848913|ref|YP_002729077.1| riboflavin biosynthesis protein RibD [Sulfurihydrogenibium azorense
           Az-Fu1]
 gi|225644745|gb|ACN99795.1| riboflavin biosynthesis protein RibD [Sulfurihydrogenibium azorense
           Az-Fu1]
          Length = 366

 Score =  121 bits (306), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 37/153 (24%), Positives = 62/153 (40%), Gaps = 18/153 (11%)

Query: 1   MKKGNVFMSCALEEA--QNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           M+    +M+ AL+ A  +         VGAV V + KII +  +   +      HAE  A
Sbjct: 1   MENLEYYMNIALDLAKERKGYTHPNPTVGAVIVKDGKIIGKGFH--YKAGMP--HAEREA 56

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
           I+          L    ++V+LEPC        C  AI    I ++     +P       
Sbjct: 57  IKDA--KSKGFDLRGSTIFVSLEPCCHYGKTPPCTEAILEEGISKVVVATLDPNPLVAGK 114

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
           G +           E+  G+ E+++++I +DFF
Sbjct: 115 GVEILKQKG----VEVVLGVLEKQAQKINEDFF 143


>gi|240103311|ref|YP_002959620.1| Riboflavin biosynthesis protein ribD (ribD) [Thermococcus
           gammatolerans EJ3]
 gi|239910865|gb|ACS33756.1| Riboflavin biosynthesis protein ribD (ribD) [Thermococcus
           gammatolerans EJ3]
          Length = 408

 Score =  121 bits (306), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 41/155 (26%), Positives = 60/155 (38%), Gaps = 22/155 (14%)

Query: 2   KKGNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57
            +   FM  ALE A+       +   P VGAV V + K+I    ++    K    HAE+ 
Sbjct: 51  NEDERFMRLALELAKRG--EGWVNPNPMVGAVIVKDGKVIGVGWHKRFGEK----HAEVN 104

Query: 58  AIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIE 111
           AI    R           +YVTLEPC        CA  I     +R+     +P      
Sbjct: 105 AIEDAKRKGHDVR--GATMYVTLEPCSHWGKQPPCADRIIREGFKRVVVAMVDPNPLVSG 162

Query: 112 NGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
            G +    A      E+  G+ E  +R++ + F K
Sbjct: 163 RGIEKMKKAG----IEVEVGVLEDEARKLNEIFIK 193


>gi|119961232|ref|YP_946898.1| cytosine deaminase [Arthrobacter aurescens TC1]
 gi|119948091|gb|ABM07002.1| Cytosine deaminase [Arthrobacter aurescens TC1]
          Length = 150

 Score =  121 bits (306), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 34/137 (24%), Positives = 52/137 (37%), Gaps = 14/137 (10%)

Query: 9   SCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQ 68
             A + AQ +     IP+GA      K+I+   N   +  D  AH E+ A+R   R  S 
Sbjct: 13  EAAYQAAQKSLSEGGIPIGAALARGGKVIASGHNERVQHGDPIAHGEMSALRAAGRQTS- 71

Query: 69  EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEI 128
               +  LY TL PC MC   I   +I R+  G +    G                  E+
Sbjct: 72  --YRDTTLYTTLAPCAMCTGTIIQFKIPRVVVGEAETFPGE----FDLLRSRG----VEV 121

Query: 129 YPGISEQ-RSRQIIQDF 144
              + +  R   +++ F
Sbjct: 122 V--VLDDPRCVDMMRTF 136


>gi|300813870|ref|ZP_07094175.1| riboflavin biosynthesis protein RibD [Peptoniphilus sp. oral taxon
           836 str. F0141]
 gi|300512057|gb|EFK39252.1| riboflavin biosynthesis protein RibD [Peptoniphilus sp. oral taxon
           836 str. F0141]
          Length = 372

 Score =  121 bits (306), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 39/151 (25%), Positives = 61/151 (40%), Gaps = 18/151 (11%)

Query: 3   KGNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
               +MS A+E A+           VG V V +++II R  ++         HAE +AI 
Sbjct: 6   DYRSYMSLAMELAEKGKGFTLTNPMVGCVIVNDDRIIGRGYHKKFGDL----HAETMAIE 61

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
                 + E L    LYV LEPC        C  AI   +I+++     +P       G 
Sbjct: 62  DA--KKNGESLEGSTLYVNLEPCCHYGKQPPCTKAIIENKIKKVVIANVDPNKKVSGKGI 119

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
           +    A      E+  GI E+   ++ ++FF
Sbjct: 120 KTLEDAG----IEVVEGIMEEEGLKLNEEFF 146


>gi|150003437|ref|YP_001298181.1| riboflavin biosynthesis protein ribD [Bacteroides vulgatus ATCC
           8482]
 gi|254881264|ref|ZP_05253974.1| riboflavin biosynthesis protein ribD [Bacteroides sp. 4_3_47FAA]
 gi|149931861|gb|ABR38559.1| riboflavin biosynthesis protein ribD [Bacteroides vulgatus ATCC
           8482]
 gi|254834057|gb|EET14366.1| riboflavin biosynthesis protein ribD [Bacteroides sp. 4_3_47FAA]
          Length = 350

 Score =  121 bits (305), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 43/152 (28%), Positives = 64/152 (42%), Gaps = 19/152 (12%)

Query: 1   MKKGNVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           M K   ++S  L+ A N          VGAV V ++ II    +         AHAE+ A
Sbjct: 1   MTKDEKYISRCLQLAYNGLCNTAPNPMVGAVIVYHDTIIGEGYHIRCGE----AHAEVNA 56

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
           IR    +  + +L E  +YV+LEPC        CA  I   RI ++  G  +P       
Sbjct: 57  IRS---VKDENLLKESTIYVSLEPCSHYGKTPPCADLIIEKRIPKVVIGCIDPYSQVAGK 113

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
           G +    A      E+  G+ E+  R +I+ F
Sbjct: 114 GIEKLRKAG----IEVTVGVLEEECRHLIRRF 141


>gi|146329385|ref|YP_001209386.1| riboflavin biosynthesis protein RibD [Dichelobacter nodosus
           VCS1703A]
 gi|146232855|gb|ABQ13833.1| riboflavin biosynthesis protein RibD [Dichelobacter nodosus
           VCS1703A]
          Length = 368

 Score =  121 bits (305), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 42/156 (26%), Positives = 60/156 (38%), Gaps = 21/156 (13%)

Query: 2   KKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
                +M  ALE A+N+       P VG V V N+ II    ++        AHAEI A+
Sbjct: 10  DSDLFYMHRALELARNSIFSAAPNPRVGCVIVKNHTIIGEGWHQRAGE----AHAEINAL 65

Query: 60  RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113
                        +  +YVTLEPC        C  A+  A ++R+    S+P       G
Sbjct: 66  NAAGTQA-----RDATVYVTLEPCAHFGRTPPCTHALIAAGVKRVVIACSDPNPLVAGKG 120

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
                 A       +  GI  Q + Q+ + FF   R
Sbjct: 121 IAALRAAG----ISVEQGICAQEALQLNRPFFHRMR 152


>gi|262042008|ref|ZP_06015188.1| conserved hypothetical protein [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
 gi|259040626|gb|EEW41717.1| conserved hypothetical protein [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
          Length = 152

 Score =  121 bits (305), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 33/107 (30%), Positives = 55/107 (51%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M   + ++  AL  A+        P GAV V N++I++ + N      + TAHAE+ A+R
Sbjct: 1   MSAHDRYLQRALVLAKQNIADGGRPFGAVLVRNDEIVAESVNTFHLSGEPTAHAELNAVR 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKG 107
                L   +L E  +Y + +PC MC +A+ L  +R +++  SN  G
Sbjct: 61  DLAARLGSAVLRECVIYASGQPCPMCLSALYLTGVREVFFANSNQDG 107


>gi|229046739|ref|ZP_04192382.1| Cytosine deaminase [Bacillus cereus AH676]
 gi|229110499|ref|ZP_04240069.1| Cytosine deaminase [Bacillus cereus Rock1-15]
 gi|229128373|ref|ZP_04257354.1| Cytosine deaminase [Bacillus cereus BDRD-Cer4]
 gi|228655232|gb|EEL11089.1| Cytosine deaminase [Bacillus cereus BDRD-Cer4]
 gi|228672983|gb|EEL28257.1| Cytosine deaminase [Bacillus cereus Rock1-15]
 gi|228724557|gb|EEL75871.1| Cytosine deaminase [Bacillus cereus AH676]
          Length = 158

 Score =  121 bits (305), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 46/142 (32%), Positives = 69/142 (48%), Gaps = 7/142 (4%)

Query: 10  CALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQ 68
            ALEEA+ A   N  PVGAV V  NN +I+R  NR    KD+TAHAE+ AIR     +  
Sbjct: 1   MALEEAEKALKENTYPVGAVIVDGNNNVIARGRNRVHPEKDITAHAELDAIRNAGEAMFD 60

Query: 69  EILPE--VDLYVTLEPCTMCAAAISLARIRRLYYGASNP-KGGGIENGTQFYTLATCHHS 125
             +      +Y TLEPC MC   I  A+I+R+ +  ++    GG +            + 
Sbjct: 61  AKIKNERFTIYSTLEPCPMCTGGILFAKIQRVVWLLNDDLGFGGYKKIKNALVFEGKFNK 120

Query: 126 PEIYPGISEQ---RSRQIIQDF 144
            ++     E    R R++++ +
Sbjct: 121 IDMVEEPFEDLKTRQRELMRQW 142


>gi|294777680|ref|ZP_06743131.1| riboflavin biosynthesis protein RibD [Bacteroides vulgatus PC510]
 gi|319640266|ref|ZP_07994991.1| riboflavin biosynthesis protein ribD [Bacteroides sp. 3_1_40A]
 gi|294448748|gb|EFG17297.1| riboflavin biosynthesis protein RibD [Bacteroides vulgatus PC510]
 gi|317388041|gb|EFV68895.1| riboflavin biosynthesis protein ribD [Bacteroides sp. 3_1_40A]
          Length = 350

 Score =  121 bits (305), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 43/152 (28%), Positives = 64/152 (42%), Gaps = 19/152 (12%)

Query: 1   MKKGNVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           M K   ++S  L+ A N          VGAV V ++ II    +         AHAE+ A
Sbjct: 1   MTKDEKYISRCLQLAYNGLCNTAPNPMVGAVIVYHDTIIGEGYHIRCGE----AHAEVNA 56

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
           IR    +  + +L E  +YV+LEPC        CA  I   RI ++  G  +P       
Sbjct: 57  IRS---VKDENLLKESTIYVSLEPCSHYGKTPPCADLIIEKRIPKVVIGCIDPFSQVAGR 113

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
           G +    A      E+  G+ E+  R +I+ F
Sbjct: 114 GIEKLRKAG----IEVTVGVLEEECRHLIRRF 141


>gi|163851859|ref|YP_001639902.1| CMP/dCMP deaminase zinc-binding [Methylobacterium extorquens PA1]
 gi|163663464|gb|ABY30831.1| CMP/dCMP deaminase zinc-binding [Methylobacterium extorquens PA1]
          Length = 301

 Score =  121 bits (305), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 43/126 (34%), Positives = 56/126 (44%), Gaps = 22/126 (17%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVL----NNKIIS--RAGNRNRELKDVTAHAEIL 57
           GN +M  A EEA+ +      P GAV +      N++I   R  N   E +D TAHAE+ 
Sbjct: 125 GNQWMRMASEEARISVENGGGPFGAVILQIDDETNEVIRYWRNHNHVPEWRDPTAHAEVS 184

Query: 58  AIRMGCRILSQEIL----------------PEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
           AIR  CR L    L                    +Y + EPC MC AAI  ARI +L + 
Sbjct: 185 AIRAACRELGVFSLASIKKEESKLPQKGATSHTVIYSSAEPCPMCYAAIYWARIPKLVFA 244

Query: 102 ASNPKG 107
           A+    
Sbjct: 245 ATRYDA 250


>gi|15605717|ref|NP_213094.1| riboflavin specific deaminase [Aquifex aeolicus VF5]
 gi|6225948|sp|O66534|RIBD_AQUAE RecName: Full=Riboflavin biosynthesis protein RibD; Includes:
           RecName:
           Full=Diaminohydroxyphosphoribosylaminopyrimidine
           deaminase; Short=DRAP deaminase; AltName:
           Full=Riboflavin-specific deaminase; Includes: RecName:
           Full=5-amino-6-(5-phosphoribosylamino)uracil reductase;
           AltName: Full=HTP reductase
 gi|2982867|gb|AAC06487.1| riboflavin specific deaminase [Aquifex aeolicus VF5]
          Length = 356

 Score =  121 bits (305), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 38/150 (25%), Positives = 57/150 (38%), Gaps = 21/150 (14%)

Query: 4   GNVFMSCALEEA--QNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
              +M  AL  A  +         VGAV V   KI+    +          HAE++A+  
Sbjct: 6   DKNYMKLALSLAKKRKGYTHPNPTVGAVVVKEGKIVGLGYHEKAGK----PHAEVMALGQ 61

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
                         LYVTLEPC        C  AI  + I+R+     +P       G +
Sbjct: 62  AGEKA-----KGATLYVTLEPCTHFGRTPPCTDAIIRSGIKRVVVATLDPNPLMSGKGVE 116

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
               A      E+  G+ E+ +R++ +DFF
Sbjct: 117 KLRNAG----IEVDVGVCEEEARELNEDFF 142


>gi|116671966|ref|YP_832899.1| CMP/dCMP deaminase, zinc-binding [Arthrobacter sp. FB24]
 gi|116612075|gb|ABK04799.1| CMP/dCMP deaminase, zinc-binding protein [Arthrobacter sp. FB24]
          Length = 164

 Score =  121 bits (305), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 33/118 (27%), Positives = 50/118 (42%), Gaps = 2/118 (1%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           +++ ++  A    L +  P GAV V  + +      NR     D TAHAE+ AIR  C  
Sbjct: 10  YLAKSIRLATANVLNSGGPFGAVVVTADGQSFG-GVNRVTATNDPTAHAEVTAIRRACSE 68

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123
           L    L    LY + EPC MC A+   AR+ R+ + A       +      +     +
Sbjct: 69  LGTFDLTGATLYTSCEPCPMCLASALWARVERVVFAADRHDAASVGFDDAVFYEYFEN 126


>gi|332878860|ref|ZP_08446575.1| riboflavin biosynthesis protein RibD [Capnocytophaga sp. oral taxon
           329 str. F0087]
 gi|332683211|gb|EGJ56093.1| riboflavin biosynthesis protein RibD [Capnocytophaga sp. oral taxon
           329 str. F0087]
          Length = 350

 Score =  121 bits (305), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 42/159 (26%), Positives = 70/159 (44%), Gaps = 24/159 (15%)

Query: 3   KGNVFMSCALEEAQNAALR---NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
               ++   ++ AQN       N + VG+V V N+++I    +         AHAE+ AI
Sbjct: 2   TDQQYIHRCIQLAQNGLGTTYPNPV-VGSVIVYNDRVIGEGWHVRAGE----AHAEVRAI 56

Query: 60  RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113
                +  +++L E  LYV+LEPC        CA  I   RI R+  G ++P       G
Sbjct: 57  ---ASVKDKQLLSESTLYVSLEPCSHYGKTPPCADLIIAHRIPRVVIGCTDPFAKVAGRG 113

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFF---KERR 149
            Q    A C    E+  G+ ++    + + FF   +++R
Sbjct: 114 IQKLREAGC----EVVVGVCQEECEALNKRFFTFHQKKR 148


>gi|307102708|gb|EFN50977.1| hypothetical protein CHLNCDRAFT_33285 [Chlorella variabilis]
          Length = 167

 Score =  121 bits (305), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 31/104 (29%), Positives = 48/104 (46%), Gaps = 4/104 (3%)

Query: 4   GNVFMSCALEEAQNAALRNEIP--VGAVAVLN--NKIISRAGNRNRELKDVTAHAEILAI 59
              +M  A+E +  A L  +     GA+ V     +++    N+     D T H E+ AI
Sbjct: 7   HETYMKRAIELSAKAGLEEQTGGCFGALIVDKETGEVVGEGYNKVILNNDPTWHGEMEAI 66

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
           R  C+      +P    Y + +PC MC  AI  AR+  +YYGA+
Sbjct: 67  REACKARGSPHIPGTVCYTSAQPCPMCYTAIMWARVDHVYYGAT 110


>gi|255532071|ref|YP_003092443.1| riboflavin biosynthesis protein RibD [Pedobacter heparinus DSM
           2366]
 gi|255345055|gb|ACU04381.1| riboflavin biosynthesis protein RibD [Pedobacter heparinus DSM
           2366]
          Length = 353

 Score =  121 bits (305), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 39/156 (25%), Positives = 59/156 (37%), Gaps = 23/156 (14%)

Query: 3   KGNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
              ++M   LE A  A     +   P VG V V + KII    +         AHAE+ A
Sbjct: 2   TNELYMQRCLELA--AMGMGNVSPNPMVGCVIVSDGKIIGEGYHARFGE----AHAEVNA 55

Query: 59  IRMGCRILSQEILPEVDL---YVTLEPC------TMCAAAISLARIRRLYYGASNPKGGG 109
           I              +     YV+LEPC        CA  +   RI+++  G ++P  G 
Sbjct: 56  INSVVHNYGNTAETLLAAATAYVSLEPCAHFGKTPPCADLLIKHRIKKVVIGNTDPFDGV 115

Query: 110 IENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
              G +       +   E+  G+ E    Q+ + FF
Sbjct: 116 NGKGIEKLK----NAGIEVVSGVLEAECSQLNRRFF 147


>gi|255320997|ref|ZP_05362170.1| riboflavin biosynthesis protein RibD [Acinetobacter radioresistens
           SK82]
 gi|262379913|ref|ZP_06073068.1| riboflavin biosynthesis protein RibD [Acinetobacter radioresistens
           SH164]
 gi|255301961|gb|EET81205.1| riboflavin biosynthesis protein RibD [Acinetobacter radioresistens
           SK82]
 gi|262298107|gb|EEY86021.1| riboflavin biosynthesis protein RibD [Acinetobacter radioresistens
           SH164]
          Length = 362

 Score =  121 bits (304), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 36/155 (23%), Positives = 57/155 (36%), Gaps = 21/155 (13%)

Query: 1   MKKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           + +   +M  A+E A+         P VG V V + +II    +          HAE+ A
Sbjct: 5   LDQDYFYMRRAIELARLGQYSTKPNPNVGCVIVKDGQIIGEGYHPRAGQ----PHAEVFA 60

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
           +R            +   YVTLEPC        CA A+   +++++     +P       
Sbjct: 61  LRQAGEQAQ-----DATAYVTLEPCAHYGRTPPCAEALVKHQLKKVVIACPDPNPLVAGK 115

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
           G      A      E+  GI E  + Q+   F K 
Sbjct: 116 GIAILKQAG----IEVESGICENEAAQLNCGFLKA 146


>gi|319795234|ref|YP_004156874.1| cmp/dcmp deaminase zinc-binding protein [Variovorax paradoxus EPS]
 gi|315597697|gb|ADU38763.1| CMP/dCMP deaminase zinc-binding protein [Variovorax paradoxus EPS]
          Length = 176

 Score =  121 bits (304), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 38/149 (25%), Positives = 59/149 (39%), Gaps = 11/149 (7%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIR 60
           ++   ++  A+  +  A  +   P G+V V  + ++++ A N   E  D T HAE  AIR
Sbjct: 20  ERDGRYLRKAIGWSHLARRQGNRPFGSVIVSADGEVLAEAYNNTGETGDCTGHAETNAIR 79

Query: 61  M-GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
               R +S++ L    LY + EPC MCA AI  + I R+ +G    +        Q    
Sbjct: 80  ALAGRGISRDTLAGATLYASGEPCVMCAGAIFWSNIGRVVFGIDAERLRVFRGERQDQRD 139

Query: 120 ATC---------HHSPEIYPGISEQRSRQ 139
           A            H  E         S  
Sbjct: 140 AELSCRDVFRASPHPIECIGPALLDESAA 168


>gi|253571299|ref|ZP_04848706.1| riboflavin biosynthesis protein ribD [Bacteroides sp. 1_1_6]
 gi|251839252|gb|EES67336.1| riboflavin biosynthesis protein ribD [Bacteroides sp. 1_1_6]
          Length = 345

 Score =  121 bits (304), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 42/152 (27%), Positives = 63/152 (41%), Gaps = 20/152 (13%)

Query: 1   MKKGNVFMSCALEEAQNAALR--NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           M++   +M   +E A+N          VGAV V +  II    +         AHAE+ A
Sbjct: 1   MEE-EKYMRRCIELAKNGLCNVAPNPMVGAVIVCDGLIIGEGYHIRCGE----AHAEVNA 55

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
           IR    +  + +L    +YV+LEPC        CA  I   +I R+  G  +P       
Sbjct: 56  IRS---VKDKSLLSRSTIYVSLEPCSHYGKTPPCADLIIEKQIPRIVIGCQDPFSQVAGR 112

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
           G Q    A      E+  G+ E+  R +I+ F
Sbjct: 113 GIQKLRDAGR----EVTVGVLEKECRYLIRRF 140


>gi|196014346|ref|XP_002117032.1| hypothetical protein TRIADDRAFT_50979 [Trichoplax adhaerens]
 gi|190580254|gb|EDV20338.1| hypothetical protein TRIADDRAFT_50979 [Trichoplax adhaerens]
          Length = 151

 Score =  121 bits (304), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 42/149 (28%), Positives = 63/149 (42%), Gaps = 21/149 (14%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           N +M  A E A  A +  E+PVG V V  NKII +  N   E+K+ T HAE++AI    +
Sbjct: 9   NEWMEIAFELANEALVAGEVPVGCVLVFGNKIIGKGRNEVNEVKNATRHAEMVAIEEAYK 68

Query: 65  ILSQEI------LPEVDLYVTLEPCTMCAAAISLARIRRL--YYGASNPKGGGIENGTQF 116
                            L VT+EPC MC+ A+       +  YY     K   I      
Sbjct: 69  WCENNQVRPSVAFSNSQLLVTVEPCIMCSMALRYLHSEAVGLYY-----KFILITFRLLI 123

Query: 117 YTLATCHHSPEIYPGISEQRSRQIIQDFF 145
                     +  PG+  +R+  +++ F+
Sbjct: 124 AD--------QTVPGLEAERAVTLLKKFY 144


>gi|237725969|ref|ZP_04556450.1| riboflavin biosynthesis protein ribD [Bacteroides sp. D4]
 gi|229435777|gb|EEO45854.1| riboflavin biosynthesis protein ribD [Bacteroides dorei 5_1_36/D4]
          Length = 355

 Score =  121 bits (304), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 42/152 (27%), Positives = 64/152 (42%), Gaps = 19/152 (12%)

Query: 1   MKKGNVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           M K   ++S  L+ A N          VGAV V ++ II    +         AHAE+ A
Sbjct: 1   MTKDEKYISRCLQLAHNGLCNTAPNPMVGAVIVYHDTIIGEGYHIRCGE----AHAEVNA 56

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
           IR    +  + +L E  +YV+LEPC        CA  I   +I ++  G  +P       
Sbjct: 57  IRS---VKDENLLKESTIYVSLEPCSHYGKTPPCADLIIEKKIPKVVIGCMDPFSLVAGR 113

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
           G +    A      E+  G+ E+  R +I+ F
Sbjct: 114 GIEKLRKAG----IEVTVGVLEEECRHLIRRF 141


>gi|212695385|ref|ZP_03303513.1| hypothetical protein BACDOR_04934 [Bacteroides dorei DSM 17855]
 gi|237711578|ref|ZP_04542059.1| riboflavin biosynthesis protein ribD [Bacteroides sp. 9_1_42FAA]
 gi|265753006|ref|ZP_06088575.1| riboflavin biosynthesis protein RibD [Bacteroides sp. 3_1_33FAA]
 gi|212662020|gb|EEB22594.1| hypothetical protein BACDOR_04934 [Bacteroides dorei DSM 17855]
 gi|229454273|gb|EEO59994.1| riboflavin biosynthesis protein ribD [Bacteroides sp. 9_1_42FAA]
 gi|263236192|gb|EEZ21687.1| riboflavin biosynthesis protein RibD [Bacteroides sp. 3_1_33FAA]
          Length = 355

 Score =  121 bits (304), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 42/152 (27%), Positives = 64/152 (42%), Gaps = 19/152 (12%)

Query: 1   MKKGNVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           M K   ++S  L+ A N          VGAV V ++ II    +         AHAE+ A
Sbjct: 1   MTKDEKYISRCLQLAHNGLCNTAPNPMVGAVIVYHDTIIGEGYHIRCGE----AHAEVNA 56

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
           IR    +  + +L E  +YV+LEPC        CA  I   +I ++  G  +P       
Sbjct: 57  IRS---VKDENLLKESTIYVSLEPCSHYGKTPPCADLIIEKKIPKVVIGCMDPFSLVAGR 113

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
           G +    A      E+  G+ E+  R +I+ F
Sbjct: 114 GIEKLRKAG----IEVTVGVLEEECRHLIRRF 141


>gi|325964675|ref|YP_004242581.1| cytosine/adenosine deaminase [Arthrobacter phenanthrenivorans
           Sphe3]
 gi|323470762|gb|ADX74447.1| cytosine/adenosine deaminase [Arthrobacter phenanthrenivorans
           Sphe3]
          Length = 164

 Score =  121 bits (304), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 34/119 (28%), Positives = 50/119 (42%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
             F++ ++  A    L +  P GA+ V  +       NR     D TAHAE+ AIR  CR
Sbjct: 8   EQFLARSIRLATANVLNSGGPFGAMIVTADGRAFDGVNRVTADNDPTAHAEVTAIRTACR 67

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123
            L    L    LY + EPC MC A+   AR+ R+ + A       +      +     +
Sbjct: 68  ELGTFDLSGATLYTSCEPCPMCLASALWARVERVVFAADRHDAASVGFDDAVFYEYFDN 126


>gi|126644134|ref|XP_001388203.1| cytidine and deoxycytidylate deaminase family [Cryptosporidium
           parvum Iowa II]
 gi|126117276|gb|EAZ51376.1| cytidine and deoxycytidylate deaminase family, putative
           [Cryptosporidium parvum Iowa II]
          Length = 186

 Score =  121 bits (304), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 42/157 (26%), Positives = 65/157 (41%), Gaps = 29/157 (18%)

Query: 18  AALRNEIPVGAVAVL--NNKIISRAGNRNRELKDVTAHAEILAIRM--------GCRILS 67
           A   NE+PVG V V     +I S A N     ++ T H EI+A+            +I +
Sbjct: 4   AVKSNEVPVGCVIVNRTTKEIESEAHNETNISRNGTRHCEIVALEKLIVKLKSTSGKINN 63

Query: 68  QEILPE------------------VDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109
              L                     DL+VT+EPC MC   I    I  ++YG  N + GG
Sbjct: 64  STRLITQNQDEYSNTRFRINLGDIYDLFVTVEPCIMCIGFIDQMGIHNIFYGCKNYRFGG 123

Query: 110 IENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
             +   ++ L        +  GI E  S +I+++F++
Sbjct: 124 CGSVLDYHHLNKS-SKIILTSGICENESIKILKEFYE 159


>gi|325662502|ref|ZP_08151105.1| hypothetical protein HMPREF0490_01845 [Lachnospiraceae bacterium
           4_1_37FAA]
 gi|325471198|gb|EGC74423.1| hypothetical protein HMPREF0490_01845 [Lachnospiraceae bacterium
           4_1_37FAA]
          Length = 159

 Score =  121 bits (304), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 35/106 (33%), Positives = 49/106 (46%), Gaps = 1/106 (0%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +    ++  A+E ++ A      P GA+ V  + +II   GN     K  T HAE     
Sbjct: 3   QSHEYYLRRAIEISKEARGAGNTPFGALLVNKDGEIIMEQGNIEITEKICTGHAEATLAA 62

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPK 106
                 S+E L +  LY T EPC MCA AI  A I R+ YG +  +
Sbjct: 63  RASHEYSKEYLWDCTLYTTAEPCAMCAGAIYWANIGRVVYGMTERR 108


>gi|94263276|ref|ZP_01287092.1| Guanine deaminase [delta proteobacterium MLMS-1]
 gi|94266409|ref|ZP_01290105.1| Guanine deaminase [delta proteobacterium MLMS-1]
 gi|93452981|gb|EAT03477.1| Guanine deaminase [delta proteobacterium MLMS-1]
 gi|93456359|gb|EAT06483.1| Guanine deaminase [delta proteobacterium MLMS-1]
          Length = 156

 Score =  121 bits (304), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 39/119 (32%), Positives = 51/119 (42%), Gaps = 1/119 (0%)

Query: 3   KGNVFMSCALEEAQNAALRN-EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
               F+   +  A +   R    P  A+ VL+++II +  NR     D TAHAEI AIR 
Sbjct: 2   DDQHFIRQTIALAADHIRRRQGGPFAALVVLDDEIIGQGCNRVTSDNDPTAHAEIEAIRD 61

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
            CR      L    LYV  EPC MC AA   A ++ + Y A       I+   Q     
Sbjct: 62  ACRRRGDFRLTGHTLYVNCEPCPMCLAAAYWADLKEICYAAERRDAAAIDFADQHLYDE 120


>gi|150864126|ref|XP_001382832.2| hypothetical protein PICST_29473 [Scheffersomyces stipitis CBS
           6054]
 gi|149385382|gb|ABN64803.2| tRNA-specific adenosine deaminase subunit [Scheffersomyces stipitis
           CBS 6054]
          Length = 276

 Score =  121 bits (304), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 38/143 (26%), Positives = 63/143 (44%), Gaps = 3/143 (2%)

Query: 8   MSCALEEAQNAALRNEIPVGAVA--VLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M+  L     A   NE PV  +   +  N+I+S   N      + T HAE +A++     
Sbjct: 11  MAKCLFVGYRALTVNETPVSCLIEDIETNEILSIGYNYTNISLNGTKHAEFIAVKRLRDS 70

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
                  +V L V++EPC MCA+ +    I  + YG SN + GG       ++       
Sbjct: 71  NLNIDFGKVRLIVSVEPCIMCASFLRQLGIGEVVYGCSNDRFGGNGTVLPIHSDPNLPQE 130

Query: 126 PEI-YPGISEQRSRQIIQDFFKE 147
           P   Y GI    + Q++++F+ +
Sbjct: 131 PYCSYGGILRSEAIQLLRNFYIQ 153


>gi|162452397|ref|YP_001614764.1| cytosine/adenosine deaminase [Sorangium cellulosum 'So ce 56']
 gi|161162979|emb|CAN94284.1| cytosine/adenosine deaminase [Sorangium cellulosum 'So ce 56']
          Length = 163

 Score =  121 bits (304), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 38/149 (25%), Positives = 64/149 (42%), Gaps = 9/149 (6%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELK----DVTAHAEILAI 59
              FM  A++ + +A     +P GAV V   +++  + N+ R       D TAHAE++ I
Sbjct: 10  DAGFMQLAVDASSDALRAGNMPFGAVLVQGGQVLQVSCNQRRTANAGEGDCTAHAEVMLI 69

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFY-- 117
           R        E L    +Y + EPC MC+ A+  A + R+ Y AS P    +  G      
Sbjct: 70  REATAAHGPEALAGGTVYASGEPCAMCSGALFWAGVSRIVYAASTPDIIAVLGGRALPVR 129

Query: 118 ---TLATCHHSPEIYPGISEQRSRQIIQD 143
               LA    +  +   I  + +  +++ 
Sbjct: 130 CHEVLANASPAVRVDGPILREAAVALLRS 158


>gi|94265695|ref|ZP_01289434.1| Guanine deaminase [delta proteobacterium MLMS-1]
 gi|93453781|gb|EAT04153.1| Guanine deaminase [delta proteobacterium MLMS-1]
          Length = 156

 Score =  120 bits (303), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 39/119 (32%), Positives = 52/119 (43%), Gaps = 1/119 (0%)

Query: 3   KGNVFMSCALEEAQNAALRN-EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
               F+   +  A +   R+   P  A+ VL+++II +  NR     D TAHAEI AIR 
Sbjct: 2   DDQHFIRQTIALAADHIRRHQGGPFAALVVLDDEIIGQGCNRVTSDNDPTAHAEIEAIRD 61

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
            CR      L    LYV  EPC MC AA   A ++ + Y A       I+   Q     
Sbjct: 62  ACRRRGDFRLTGHTLYVNCEPCPMCLAAAYWADLKEICYAAERRDAAAIDFADQHLYDE 120


>gi|60680029|ref|YP_210173.1| putative riboflavin biosynthesis protein [includes:
           diaminohydroxyphosphoribosylaminopyrimidine deaminase
           [Bacteroides fragilis NCTC 9343]
 gi|60491463|emb|CAH06213.1| putative riboflavin biosynthesis protein [includes:
           diaminohydroxyphosphoribosylaminopyrimidine deaminase
           [Bacteroides fragilis NCTC 9343]
          Length = 340

 Score =  120 bits (303), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 41/145 (28%), Positives = 59/145 (40%), Gaps = 19/145 (13%)

Query: 8   MSCALEEAQNAALR--NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M   ++ A+N          VGAV V   +II    +         AHAE+ AIR    +
Sbjct: 1   MRRCIQLAKNGLCNVSPNPMVGAVIVCEGQIIGEGYHIRCGE----AHAEVNAIRS---V 53

Query: 66  LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
               +L    +YV+LEPC        CA  I   +I R+  G  +P       G Q    
Sbjct: 54  KDPSLLKHSTIYVSLEPCSHHGKTPPCADLIIEKQIPRIVIGCQDPFSKVAGKGIQKLRD 113

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDF 144
           A C    E+  G+ E   R++I+ F
Sbjct: 114 AGC----EVIVGVLETECRELIRKF 134


>gi|87311104|ref|ZP_01093228.1| putative nucleotide deaminase [Blastopirellula marina DSM 3645]
 gi|87286195|gb|EAQ78105.1| putative nucleotide deaminase [Blastopirellula marina DSM 3645]
          Length = 162

 Score =  120 bits (303), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 34/138 (24%), Positives = 64/138 (46%), Gaps = 4/138 (2%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  A+E+A+      + P G    ++ ++++ + N   +  D TAHAE+ A+R+ C+ + 
Sbjct: 13  MQLAIEKAKQGIAARQSPFGCAIAVDGEVVAVSHNLVLQTVDATAHAEVTALRVACQKVG 72

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS-- 125
           + +LP   +  T EPC MCAAA+  AR+  +YYGA+                 + +    
Sbjct: 73  EILLPRAQVATTCEPCPMCAAALHWARVAEIYYGATIDDAAAAGFNELRVPARSLYEQGG 132

Query: 126 --PEIYPGISEQRSRQII 141
               +   +     R++ 
Sbjct: 133 SSTRLISDVERAACRELF 150


>gi|325677177|ref|ZP_08156843.1| guanine deaminase [Rhodococcus equi ATCC 33707]
 gi|325551874|gb|EGD21570.1| guanine deaminase [Rhodococcus equi ATCC 33707]
          Length = 156

 Score =  120 bits (303), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 29/94 (30%), Positives = 45/94 (47%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           F+   ++ A+        P  AV V + ++++ + NR  +  D TAHAEILAIR  C  L
Sbjct: 3   FVQRTIDLARQNVTEGGRPFAAVIVKDGEVLAESPNRVAQTGDPTAHAEILAIRQACTEL 62

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
             E L    +YV   PC MC  ++       + +
Sbjct: 63  GTEHLTGTTIYVLAHPCPMCLGSLYYCSPDEVVF 96


>gi|310827884|ref|YP_003960241.1| riboflavin biosynthesis protein RibD [Eubacterium limosum KIST612]
 gi|308739618|gb|ADO37278.1| riboflavin biosynthesis protein RibD [Eubacterium limosum KIST612]
          Length = 367

 Score =  120 bits (303), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 43/155 (27%), Positives = 56/155 (36%), Gaps = 21/155 (13%)

Query: 3   KGNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
               +M  ALEEA      +     VGAV V N  +I R  +          HAE  AI 
Sbjct: 2   NDQDYMRLALEEAWKGCGFVNPNPMVGAVIVKNGCVIGRGAHERYGG----PHAERNAI- 56

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
                   E L +  LYVTL PC        C   +    IRR+  G+ +P     E   
Sbjct: 57  ----AHCTEDLQDATLYVTLTPCCHFGKTPPCTDVVLENGIRRVVIGSHDPNPLVAEKSI 112

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
           +        H  E+  GI +Q    +   FF   R
Sbjct: 113 EILRQ----HGVEVTTGILQQECDALNDAFFHFIR 143


>gi|294784869|ref|ZP_06750157.1| riboflavin biosynthesis protein RibD [Fusobacterium sp. 3_1_27]
 gi|294486583|gb|EFG33945.1| riboflavin biosynthesis protein RibD [Fusobacterium sp. 3_1_27]
          Length = 369

 Score =  120 bits (303), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 38/155 (24%), Positives = 60/155 (38%), Gaps = 25/155 (16%)

Query: 2   KKGNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57
                +M+ A+E A+       +   P VGAV V + KII    ++         HAE+ 
Sbjct: 4   NSDEKYMARAIELAKRG--TGGVNPNPLVGAVIVKDGKIIGEGWHKKFGG----PHAEVW 57

Query: 58  AIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIE 111
           A+         E      +YVTLEPC        CA  I  A I+R      +P      
Sbjct: 58  ALNEAG-----ENAKGATVYVTLEPCSHQGKTPPCAKRIIEAGIKRCVVACIDPNPLVAG 112

Query: 112 NGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
            G +       +   E+  G+ E+ ++ + + F K
Sbjct: 113 KGMKIIE----NAGIEVELGVLEKEAKDVNKIFLK 143


>gi|265765179|ref|ZP_06093454.1| riboflavin biosynthesis protein RibD [Bacteroides sp. 2_1_16]
 gi|263254563|gb|EEZ25997.1| riboflavin biosynthesis protein RibD [Bacteroides sp. 2_1_16]
          Length = 340

 Score =  120 bits (303), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 41/145 (28%), Positives = 59/145 (40%), Gaps = 19/145 (13%)

Query: 8   MSCALEEAQNAALR--NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M   ++ A+N          VGAV V   +II    +         AHAE+ AIR    +
Sbjct: 1   MRRCIQLAKNGLCNVSPNPMVGAVIVCEGQIIGEGYHIRCGE----AHAEVNAIRS---V 53

Query: 66  LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
               +L    +YV+LEPC        CA  I   +I R+  G  +P       G Q    
Sbjct: 54  KDPSLLKHSTIYVSLEPCSHHGKTPPCADLIIEKQIPRIVIGCQDPFSKVAGKGIQKLRD 113

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDF 144
           A C    E+  G+ E   R++I+ F
Sbjct: 114 AGC----EVIVGVLETECRELIRKF 134


>gi|327278242|ref|XP_003223871.1| PREDICTED: tRNA-specific adenosine deaminase-like protein 3-like
           [Anolis carolinensis]
          Length = 353

 Score =  120 bits (303), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 38/146 (26%), Positives = 63/146 (43%), Gaps = 16/146 (10%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLN--NKIISRAGNRNRELKDVTAHAEILAIRMG 62
              M  A++ AQ  A +   PVGAV V     K+++      R+  +   H         
Sbjct: 211 QYHMELAIQAAQQGAKQGMRPVGAVVVDPSSGKVLAVGH-DCRDGLNPIDH-------QS 262

Query: 63  CRILSQ-----EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFY 117
                       I    D+Y+T EPC MCA ++  +RI R++YG  +P  G +      +
Sbjct: 263 GHSSPSTNGLPYICTGYDMYLTREPCAMCAMSLVHSRIERVFYGVPSP-HGALGTALHIH 321

Query: 118 TLATCHHSPEIYPGISEQRSRQIIQD 143
           +    +H  E++ G+ E R R + Q+
Sbjct: 322 SRRDLNHRYEVFRGVLEGRCRSLEQE 347


>gi|253564134|ref|ZP_04841591.1| riboflavin biosynthesis protein RibD [Bacteroides sp. 3_2_5]
 gi|251947910|gb|EES88192.1| riboflavin biosynthesis protein RibD [Bacteroides sp. 3_2_5]
 gi|301161570|emb|CBW21110.1| putative riboflavin biosynthesis protein [includes:
           diaminohydroxyphosphoribosylaminopyrimidine deaminase
           [Bacteroides fragilis 638R]
          Length = 340

 Score =  120 bits (303), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 41/145 (28%), Positives = 59/145 (40%), Gaps = 19/145 (13%)

Query: 8   MSCALEEAQNAALR--NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M   ++ A+N          VGAV V   +II    +         AHAE+ AIR    +
Sbjct: 1   MRRCIQLAKNGLCNVSPNPMVGAVIVCEGQIIGEGYHIRCGE----AHAEVNAIRS---V 53

Query: 66  LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
               +L    +YV+LEPC        CA  I   +I R+  G  +P       G Q    
Sbjct: 54  KDPSLLKHSTIYVSLEPCSHHGKTPPCADLIIEKQIPRIVIGCQDPFSKVAGKGIQKLRD 113

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDF 144
           A C    E+  G+ E   R++I+ F
Sbjct: 114 AGC----EVIVGVLEPECRELIRKF 134


>gi|258647712|ref|ZP_05735181.1| riboflavin biosynthesis protein RibD [Prevotella tannerae ATCC
           51259]
 gi|260852547|gb|EEX72416.1| riboflavin biosynthesis protein RibD [Prevotella tannerae ATCC
           51259]
          Length = 322

 Score =  120 bits (303), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 44/154 (28%), Positives = 64/154 (41%), Gaps = 19/154 (12%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57
           M+  +++M   L  A+N  L    P   VGAV V  ++II    +     K   AHAE+ 
Sbjct: 1   MEIKDIYMHRCLRLAENGRLSA-PPNPMVGAVIVYKDRIIGEGYHA----KCGQAHAEVN 55

Query: 58  AIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIE 111
           AI    R   +  L +  LYV+LEPC        CA  I    I R+  G  +P      
Sbjct: 56  AI-ASVRPDDRPHLQDSTLYVSLEPCAHYGRTPPCARLILNTGIPRVVVGCEDPFDKVEG 114

Query: 112 NGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
            G             ++  G+ EQ  R++ + FF
Sbjct: 115 RGITMLRDGG----VQVTVGVLEQECRELNRHFF 144


>gi|256827880|ref|YP_003156608.1| riboflavin biosynthesis protein RibD [Desulfomicrobium baculatum
           DSM 4028]
 gi|256577056|gb|ACU88192.1| riboflavin biosynthesis protein RibD [Desulfomicrobium baculatum
           DSM 4028]
          Length = 374

 Score =  120 bits (303), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 39/153 (25%), Positives = 56/153 (36%), Gaps = 20/153 (13%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57
           M +   FM  A+  A+    R   P   VGAV     ++++   +          HAE+ 
Sbjct: 1   MHEDCAFMDQAIRLAEQGRGRT-APNPCVGAVLTRGGEVVAEGWHT--ACGQP--HAEVE 55

Query: 58  AIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIE 111
           A+R               LYVTLEPC        C  AI  A +  +  G ++P      
Sbjct: 56  ALRDAQAKGVDPR--GCTLYVTLEPCNHQGKTPPCTRAILEAGVPEVVVGCADPNPTVAG 113

Query: 112 NGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
            G  F           +  G+ EQ  R +I DF
Sbjct: 114 GGADFLRGRG----VTVRMGVREQECRDLIADF 142


>gi|218531388|ref|YP_002422204.1| CMP/dCMP deaminase zinc-binding [Methylobacterium
          chloromethanicum CM4]
 gi|218523691|gb|ACK84276.1| CMP/dCMP deaminase zinc-binding [Methylobacterium
          chloromethanicum CM4]
          Length = 153

 Score =  120 bits (303), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 32/99 (32%), Positives = 50/99 (50%)

Query: 1  MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
          M     ++  A E A         P GAV V + +++ RA NR     D + HAE++AIR
Sbjct: 1  MPDHESYLREATEIALANVAEGGRPYGAVIVRDGEVVVRAANRIHATNDPSDHAEMVAIR 60

Query: 61 MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLY 99
             + L +  L +  +Y +  PC MC AA+ LA +++ Y
Sbjct: 61 AASQQLGRPKLDDCIVYASGRPCPMCHAAMRLAGVKQGY 99


>gi|325964826|ref|YP_004242732.1| cytosine/adenosine deaminase [Arthrobacter phenanthrenivorans
           Sphe3]
 gi|323470913|gb|ADX74598.1| cytosine/adenosine deaminase [Arthrobacter phenanthrenivorans
           Sphe3]
          Length = 164

 Score =  120 bits (302), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 37/137 (27%), Positives = 55/137 (40%), Gaps = 14/137 (10%)

Query: 9   SCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQ 68
             A + AQ +A    IP+GA       +I+   N   +  D  AH E+ A+R   R   Q
Sbjct: 22  EAAYQAAQKSAGEGGIPIGAALARGGVVIAAGHNERVQKGDPIAHGEMSALRAAGR---Q 78

Query: 69  EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEI 128
           +   +  LY TL PC MC   I   +I R+  G +   GG  E               E+
Sbjct: 79  KSYRDTTLYTTLAPCAMCTGTIIQFKIPRVVVGEARTFGGEFE----LLRSRG----VEV 130

Query: 129 YPGISEQ-RSRQIIQDF 144
              + +  R   ++Q F
Sbjct: 131 V--VLDDQRCVDMMQTF 145


>gi|53711798|ref|YP_097790.1| riboflavin biosynthesis protein RibD [Bacteroides fragilis YCH46]
 gi|52214663|dbj|BAD47256.1| riboflavin biosynthesis protein RibD [Bacteroides fragilis YCH46]
          Length = 340

 Score =  120 bits (302), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 41/145 (28%), Positives = 59/145 (40%), Gaps = 19/145 (13%)

Query: 8   MSCALEEAQNAALR--NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M   ++ A+N          VGAV V   +II    +         AHAE+ AIR    +
Sbjct: 1   MRRCIQLAKNGLCNVSPNPMVGAVIVCEGQIIGEGYHIRCGE----AHAEVNAIRS---V 53

Query: 66  LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
               +L    +YV+LEPC        CA  I   +I R+  G  +P       G Q    
Sbjct: 54  KDPSLLKHSTIYVSLEPCSHHGKTPPCADLIIEKQIPRIVIGCQDPFSKVAGKGIQKLRD 113

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDF 144
           A C    E+  G+ E   R++I+ F
Sbjct: 114 AGC----EVIVGVLETECRELIRKF 134


>gi|255655719|ref|ZP_05401128.1| riboflavin biosynthesis protein [Clostridium difficile QCD-23m63]
 gi|296451726|ref|ZP_06893457.1| riboflavin biosynthesis protein RibD [Clostridium difficile NAP08]
 gi|296878970|ref|ZP_06902968.1| riboflavin biosynthesis protein RibD [Clostridium difficile NAP07]
 gi|296259427|gb|EFH06291.1| riboflavin biosynthesis protein RibD [Clostridium difficile NAP08]
 gi|296429997|gb|EFH15846.1| riboflavin biosynthesis protein RibD [Clostridium difficile NAP07]
          Length = 370

 Score =  120 bits (302), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 41/159 (25%), Positives = 64/159 (40%), Gaps = 24/159 (15%)

Query: 2   KKGNVFMSCALEEAQNAAL-RNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
           +K   +M  A+E A+N     N  P VG V V ++ II +  +          HAE+ AI
Sbjct: 8   EKDIYYMKKAIELAKNGEGFVNPNPLVGCVIVKDDYIIGKGYHEKFGSN----HAEVNAI 63

Query: 60  RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113
               +      L +  LYV LEPC        C   I   +I+R+     +P      NG
Sbjct: 64  NSAKQ-----SLKDSTLYVNLEPCSHYGKTPPCVDKIIQNKIKRVVISTLDPNPLVCGNG 118

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFF---KERR 149
            +           ++  G  E+ +R + + FF   K +R
Sbjct: 119 VKKLRDNN----IDVTVGTLEEEARDLNEVFFYYIKNKR 153


>gi|225620931|ref|YP_002722189.1| riboflavin biosynthesis protein RibD [Brachyspira hyodysenteriae
           WA1]
 gi|225215751|gb|ACN84485.1| riboflavin biosynthesis protein RibD [Brachyspira hyodysenteriae
           WA1]
          Length = 360

 Score =  120 bits (302), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 43/157 (27%), Positives = 65/157 (41%), Gaps = 29/157 (18%)

Query: 8   MSCALEEAQNAALRNEI-----P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           M  A+EEA+      E      P VGAV V + K+I    ++         HAEI A   
Sbjct: 1   MKMAIEEAKK----GEGFTSPNPLVGAVIVKDGKVIGIGYHKKCGEN----HAEINAFLD 52

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
                  E + + D+YVTLEPC        CA AI   +++R+  G  +       NG +
Sbjct: 53  A--KEKGENVEDADIYVTLEPCSHYGKTPPCADAIIKNKLKRVIIGCVDSNPKVAGNGIK 110

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFF---KERR 149
               A      E+   + E+  R++ + FF     +R
Sbjct: 111 KLKDAG----IEVIVNVLEEECRKLNEVFFYYIANKR 143


>gi|317497909|ref|ZP_07956219.1| riboflavin biosynthesis protein RibD [Lachnospiraceae bacterium
           5_1_63FAA]
 gi|316894890|gb|EFV17062.1| riboflavin biosynthesis protein RibD [Lachnospiraceae bacterium
           5_1_63FAA]
          Length = 366

 Score =  120 bits (302), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 44/153 (28%), Positives = 62/153 (40%), Gaps = 23/153 (15%)

Query: 1   MKKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           MK    +M  A+E A+      N  P VGAV V + K+I    +          HAE  A
Sbjct: 1   MK--EEYMRRAIELAKKGCGYTNPNPLVGAVIVKDQKVIGEGYHEKIGGL----HAERNA 54

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
           ++        E     ++YVTLEPC        C  A+  A I+++Y G  +P       
Sbjct: 55  LKN-----CIEDPKGAEIYVTLEPCCHYGKTPPCTEALIEAGIKKVYVGNLDPNPKVAGG 109

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
           G +        H  E   GI E+  RQ+   FF
Sbjct: 110 GIKILND----HGIETETGILEEECRQLNDIFF 138


>gi|268589808|ref|ZP_06124029.1| tRNA-specific adenosine deaminase [Providencia rettgeri DSM 1131]
 gi|291314796|gb|EFE55249.1| tRNA-specific adenosine deaminase [Providencia rettgeri DSM 1131]
          Length = 157

 Score =  120 bits (302), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 32/132 (24%), Positives = 54/132 (40%), Gaps = 4/132 (3%)

Query: 20  LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVT 79
            +   P GAV V +N+++    N      D T HAE+  IR  C       L E  LY +
Sbjct: 24  KKGNEPFGAVLVKDNQVVMTGENHIHTESDPTYHAELGLIRQYCSEHKIMNLSEYTLYTS 83

Query: 80  LEPCTMCAAAISLARIRRLYYGAS-NPKGGGIENGTQFYTLATC---HHSPEIYPGISEQ 135
            EPC MC+ A+   ++ R+ Y  S +             +          P +  G+ ++
Sbjct: 84  CEPCCMCSGAMVWCQLGRMVYSLSHDELAEIAGFNIMLGSDEIFAKSPFKPAVTHGVLKE 143

Query: 136 RSRQIIQDFFKE 147
           ++  I   +F+ 
Sbjct: 144 KAMLIYTQYFQA 155


>gi|298386833|ref|ZP_06996388.1| riboflavin biosynthesis protein RibD [Bacteroides sp. 1_1_14]
 gi|298260507|gb|EFI03376.1| riboflavin biosynthesis protein RibD [Bacteroides sp. 1_1_14]
          Length = 345

 Score =  120 bits (302), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 42/152 (27%), Positives = 63/152 (41%), Gaps = 20/152 (13%)

Query: 1   MKKGNVFMSCALEEAQNAALR--NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           M++   +M   +E A+N          VGAV V +  II    +         AHAE+ A
Sbjct: 1   MEE-EKYMRRCIELAKNGLCNVAPNPMVGAVIVCDGLIIGEGYHIRCGE----AHAEVNA 55

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
           IR    +  + +L    +YV+LEPC        CA  I   +I R+  G  +P       
Sbjct: 56  IRS---VKDKSLLSRSTIYVSLEPCSHYGKTPPCADLIIEKQIPRIVIGCQDPFSQVAGR 112

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
           G Q    A      E+  G+ E+  R +I+ F
Sbjct: 113 GIQKLRDAGR----EVTIGVLEKECRYLIRRF 140


>gi|262066887|ref|ZP_06026499.1| riboflavin biosynthesis protein RibD [Fusobacterium periodonticum
           ATCC 33693]
 gi|291379396|gb|EFE86914.1| riboflavin biosynthesis protein RibD [Fusobacterium periodonticum
           ATCC 33693]
          Length = 369

 Score =  120 bits (302), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 42/158 (26%), Positives = 63/158 (39%), Gaps = 27/158 (17%)

Query: 1   MKK--GNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHA 54
           M+K     FM+ A+E A        +   P VGAV V + KII    ++         HA
Sbjct: 1   MEKTVDEKFMARAIELAFKGL--GGVNPNPLVGAVVVKDGKIIGEGWHKKYGG----PHA 54

Query: 55  EILAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGG 108
           E+ A+         E      +YVTLEPC        CA  I  A I+R      +P   
Sbjct: 55  EVWALNEAG-----EEAKGATIYVTLEPCSHQGKTPPCAKRIVEAGIKRCVIACIDPNPL 109

Query: 109 GIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
               G +    A      ++  GI E+ ++++ + F K
Sbjct: 110 VAGKGIKIIEDAG----IKVDFGILEKEAKEVNKVFLK 143


>gi|302392186|ref|YP_003828006.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase
           ;5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Acetohalobium arabaticum DSM 5501]
 gi|302204263|gb|ADL12941.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase
           ;5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Acetohalobium arabaticum DSM 5501]
          Length = 371

 Score =  120 bits (302), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 36/153 (23%), Positives = 61/153 (39%), Gaps = 21/153 (13%)

Query: 2   KKGNVFMSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
            +   +M  AL+ A     R    P VGAV V + +I+ +  +          HAE+ A+
Sbjct: 5   NRDIDYMRLALDLAAKGRGRTSPNPMVGAVIVKDGEIVGQGYHHAAGK----PHAEVNAL 60

Query: 60  RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113
           +            +  +YVTLEPC        C  A+  A + R+     +P       G
Sbjct: 61  QDAADKT-----EDATVYVTLEPCSHYGKTPPCTKALIGAGVSRVVAAMKDPNPKVAGRG 115

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
            Q    A      E+  G+ E+ ++++ + F K
Sbjct: 116 LQKLADAG----IEVESGLLEEEAKELNEAFIK 144


>gi|262405149|ref|ZP_06081699.1| riboflavin biosynthesis protein RibD [Bacteroides sp. 2_1_22]
 gi|262356024|gb|EEZ05114.1| riboflavin biosynthesis protein RibD [Bacteroides sp. 2_1_22]
          Length = 351

 Score =  120 bits (302), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 40/152 (26%), Positives = 63/152 (41%), Gaps = 20/152 (13%)

Query: 1   MKKGNVFMSCALEEAQNAALR--NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           M++   +M   +E A+N          VGAV V + +II    +         AHAE+ A
Sbjct: 7   MEE-EKYMRRCIELAKNGLCNVSPNPMVGAVIVCDGRIIGEGYHIRCGE----AHAEVNA 61

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
           I     +  + +L    +YV+LEPC        CA  I   +I R+  G  +P       
Sbjct: 62  IHS---VKDESLLKRSTIYVSLEPCSHYGKTPPCADLIIEKQIPRIVIGCQDPFSEVAGR 118

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
           G Q    A      E+  G+ E+  + +I+ F
Sbjct: 119 GIQKLRDAGR----EVSVGVLEEECKSLIRRF 146


>gi|290993580|ref|XP_002679411.1| purine deaminase [Naegleria gruberi]
 gi|284093027|gb|EFC46667.1| purine deaminase [Naegleria gruberi]
          Length = 203

 Score =  120 bits (302), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 34/162 (20%), Positives = 61/162 (37%), Gaps = 20/162 (12%)

Query: 4   GNVFMSCALEEAQNA-ALRNEIPVGAVAVLN--NKIISRAGNRNRELKDVTAHAEILAIR 60
               M  A++ ++ +       P GA+ + N  N+II  A N      D T HAE+    
Sbjct: 42  HEKLMKRAIDLSKESCNDHGNHPFGALLIDNDTNEIILEAHNTVHTENDRTRHAELNLSS 101

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS---------------NP 105
           M  +   ++ L    +Y + EPC MCA AI    I ++ Y                  N 
Sbjct: 102 MASKKYPRDYLTNCTMYTSTEPCIMCAGAIFWVGIGKVVYACPASRLREIVRRKQDGNNL 161

Query: 106 KGGGIENGT--QFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
           K  G       + +   +   +  +   I E+ +  + + ++
Sbjct: 162 KNSGSLTIACREIFEERSEGLNIPLIGPIMEEEAAAVHESYW 203


>gi|260495221|ref|ZP_05815349.1| riboflavin biosynthesis protein RibD [Fusobacterium sp. 3_1_33]
 gi|260197278|gb|EEW94797.1| riboflavin biosynthesis protein RibD [Fusobacterium sp. 3_1_33]
          Length = 369

 Score =  120 bits (302), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 39/155 (25%), Positives = 60/155 (38%), Gaps = 25/155 (16%)

Query: 2   KKGNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57
                +M+ A+E A+       +   P VGAV V + KII    ++         HAE+ 
Sbjct: 4   NSDEKYMARAIELAKRG--TGSVNPNPLVGAVVVKDGKIIGEGWHKKYGG----PHAEVW 57

Query: 58  AIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIE 111
           A+         E      +YVTLEPC        CA  I  A I+R      +P      
Sbjct: 58  ALNEAG-----ENAKGATIYVTLEPCSHQGKTPPCAKRIVEAGIKRCVVACIDPNPLVAG 112

Query: 112 NGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
            G +    A      E+  G+ E+ ++ + + F K
Sbjct: 113 KGIKIIEDAG----IEVKLGVLEKEAKDVNKIFLK 143


>gi|311030745|ref|ZP_07708835.1| riboflavin biosynthesis protein RibD [Bacillus sp. m3-13]
          Length = 367

 Score =  120 bits (301), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 36/152 (23%), Positives = 65/152 (42%), Gaps = 22/152 (14%)

Query: 3   KGNVFMSCALEEAQNAALR---NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
               +M  A++ A+ A  +   N + VG+V V N +I+    +         AHAE+ AI
Sbjct: 2   DDQYYMKFAIDLAKRATGQTSPNPV-VGSVVVKNGEIVGFGAHLRAGE----AHAEVNAI 56

Query: 60  RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113
           +M       +      +YVTLEPC        C+  +  +++ R+   +++P       G
Sbjct: 57  QMA----GVDKANGSTVYVTLEPCSHFGKTPPCSDLLIQSQVSRVVIASTDPNPLVAGRG 112

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
            +    A      E+  G+ E+ +  + Q FF
Sbjct: 113 IEKLRKAG----IEVELGVCEEEALALNQVFF 140


>gi|266622681|ref|ZP_06115616.1| putative cytosine deaminase [Clostridium hathewayi DSM 13479]
 gi|288865589|gb|EFC97887.1| putative cytosine deaminase [Clostridium hathewayi DSM 13479]
          Length = 160

 Score =  120 bits (301), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 32/106 (30%), Positives = 48/106 (45%), Gaps = 1/106 (0%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +    ++  A+E ++ A      P GA+ V  +  I+   GN     K  T HAE     
Sbjct: 4   QSHEYYLRRAIEISKEARAAGNTPFGALLVNKDGDIVMEQGNIEITDKICTGHAEATLAA 63

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPK 106
                 +++ L +  LY T EPC MCA AI  A I R+ YG +  +
Sbjct: 64  RASHEFTKDYLWDCTLYTTAEPCAMCAGAIYWANIGRVVYGMTERR 109


>gi|225028184|ref|ZP_03717376.1| hypothetical protein EUBHAL_02456 [Eubacterium hallii DSM 3353]
 gi|224954496|gb|EEG35705.1| hypothetical protein EUBHAL_02456 [Eubacterium hallii DSM 3353]
          Length = 411

 Score =  120 bits (301), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 37/149 (24%), Positives = 57/149 (38%), Gaps = 18/149 (12%)

Query: 5   NVFMSCALEEAQNAALR-NEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
             +M  A+E A+  +   N  P VGAV V + +II    +          HAE  AI   
Sbjct: 4   EKYMRRAIELAKKGSGHVNPNPLVGAVIVKDGEIIGEGYHECYGQL----HAERNAIANA 59

Query: 63  CRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116
            +  +   +    +YVTLEPC        C  AI   +I R+  G+ +P       G + 
Sbjct: 60  RKRGNN--IEGSTIYVTLEPCCHYGKTPPCTEAIIEEKIARVVVGSDDPNPLVSGKGFKL 117

Query: 117 YTLATCHHSPEIYPGISEQRSRQIIQDFF 145
                     E+ P   ++    +   FF
Sbjct: 118 LREKG----IEVIPHFLKEECDAMNHVFF 142


>gi|282883344|ref|ZP_06291938.1| riboflavin biosynthesis protein RibD [Peptoniphilus lacrimalis
           315-B]
 gi|281296848|gb|EFA89350.1| riboflavin biosynthesis protein RibD [Peptoniphilus lacrimalis
           315-B]
          Length = 372

 Score =  120 bits (301), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 38/151 (25%), Positives = 62/151 (41%), Gaps = 18/151 (11%)

Query: 3   KGNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
               +MS A++ A+           VG V V +++II R  ++         HAE +AI 
Sbjct: 6   DYRSYMSLAMDLAEKGKGFTLTNPMVGCVIVNDDRIIGRGYHKKFGDL----HAETMAIE 61

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
              +  + E L    LYV LEPC        C  AI   +I+++     +P       G 
Sbjct: 62  DAQK--NGESLEGSTLYVNLEPCCHYGKQPPCTKAIIENKIKKVVIANVDPNKKVSGKGI 119

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
           +    A      E+  GI E+   ++ ++FF
Sbjct: 120 KTLEDAG----IEVVEGIMEEEGLKLNEEFF 146


>gi|237715308|ref|ZP_04545789.1| riboflavin biosynthesis protein ribD [Bacteroides sp. D1]
 gi|294643551|ref|ZP_06721357.1| riboflavin biosynthesis protein RibD [Bacteroides ovatus SD CC 2a]
 gi|294807058|ref|ZP_06765877.1| riboflavin biosynthesis protein RibD [Bacteroides xylanisolvens SD
           CC 1b]
 gi|229444617|gb|EEO50408.1| riboflavin biosynthesis protein ribD [Bacteroides sp. D1]
 gi|292641126|gb|EFF59338.1| riboflavin biosynthesis protein RibD [Bacteroides ovatus SD CC 2a]
 gi|294445757|gb|EFG14405.1| riboflavin biosynthesis protein RibD [Bacteroides xylanisolvens SD
           CC 1b]
          Length = 345

 Score =  120 bits (301), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 40/152 (26%), Positives = 63/152 (41%), Gaps = 20/152 (13%)

Query: 1   MKKGNVFMSCALEEAQNAALR--NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           M++   +M   +E A+N          VGAV V + +II    +         AHAE+ A
Sbjct: 1   MEE-EKYMRRCIELAKNGLCNVSPNPMVGAVIVCDGRIIGEGYHIRCGE----AHAEVNA 55

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
           I     +  + +L    +YV+LEPC        CA  I   +I R+  G  +P       
Sbjct: 56  IHS---VKDESLLKRSTIYVSLEPCSHYGKTPPCADLIIEKQIPRIVIGCQDPFSEVAGR 112

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
           G Q    A      E+  G+ E+  + +I+ F
Sbjct: 113 GIQKLRDAGR----EVSVGVLEEECKSLIRRF 140


>gi|18309548|ref|NP_561482.1| riboflavin biosynthesis protein RibD [Clostridium perfringens str.
           13]
 gi|18144225|dbj|BAB80272.1| riboflavin biosynthesis protein [Clostridium perfringens str. 13]
          Length = 366

 Score =  120 bits (301), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 39/149 (26%), Positives = 58/149 (38%), Gaps = 21/149 (14%)

Query: 4   GNVFMSCALEEAQNAAL-RNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
              FM  ALE A+      N  P VGAV V + +II +  +          HAEI AI  
Sbjct: 2   DEFFMKKALELARKGEGYVNPNPLVGAVIVKDGEIIGQGYHEFFGGN----HAEINAINS 57

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
             +           +YVTLEPC        C  AI   + +R+  G  +P       G +
Sbjct: 58  SIKST-----EGATIYVTLEPCCHYGKTPPCVEAIIKNKFKRVVVGTLDPNPLVSGKGIK 112

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDF 144
               +      E+  G+ E+   ++ + F
Sbjct: 113 ILRESG----IEVKVGVLEKECIRLNEIF 137


>gi|239820133|ref|YP_002947318.1| CMP/dCMP deaminase zinc-binding [Variovorax paradoxus S110]
 gi|239804986|gb|ACS22052.1| CMP/dCMP deaminase zinc-binding [Variovorax paradoxus S110]
          Length = 158

 Score =  120 bits (301), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 37/104 (35%), Positives = 52/104 (50%), Gaps = 1/104 (0%)

Query: 5   NVFMSCALEEA-QNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
             +M  A+  A +N   R   P GAV V   K+++RA N    L D TAHAE+ A+RM  
Sbjct: 9   EKYMLDAIRLAMRNVRERRTWPFGAVLVREGKVLARAVNEVDALCDPTAHAEMQAVRMAA 68

Query: 64  RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKG 107
           +      L    +Y +  PC MC  A+ LA ++ + Y  SN  G
Sbjct: 69  KAQGGTDLSGSVVYASGYPCPMCLTAMFLAGVKEVCYAYSNEDG 112


>gi|67464318|pdb|1YSB|A Chain A, Yeast Cytosine Deaminase Triple Mutant
 gi|67464319|pdb|1YSB|B Chain B, Yeast Cytosine Deaminase Triple Mutant
          Length = 161

 Score =  120 bits (301), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 38/150 (25%), Positives = 62/150 (41%), Gaps = 13/150 (8%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAI 59
           K     M  A EEA        +P+G   +   +  ++ R  N   +    T H EI  +
Sbjct: 12  KWDQKGMDIAYEEALLGYKEGGVPIGGCLINNKDGSVLGRGHNMRFQKGSATLHGEISTL 71

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS-NPKGGGIENGTQFYT 118
               R+   ++  +  LY TL PC MC  AI +  I R   G + N K  G +       
Sbjct: 72  ENCGRLEG-KVYKDTTLYTTLSPCDMCTGAIIMYGIPRCVIGENVNFKSKGEK------Y 124

Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKER 148
           L T  H   +   + ++R +++++ F  ER
Sbjct: 125 LQTRGHEVVV---VDDERCKKLMKQFIDER 151


>gi|212223758|ref|YP_002306994.1| riboflavin biosynthesis protein RibD [Thermococcus onnurineus NA1]
 gi|212008715|gb|ACJ16097.1| riboflavin biosynthesis protein RibD [Thermococcus onnurineus NA1]
          Length = 361

 Score =  120 bits (301), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 43/156 (27%), Positives = 61/156 (39%), Gaps = 22/156 (14%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56
           M +   FM  ALE A+       +   P VGAV V + ++I    +R    K    HAEI
Sbjct: 2   MDEDKKFMHLALELAKRG--EGWVNPNPMVGAVIVKDGEVIGVGWHRKFGEK----HAEI 55

Query: 57  LAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGI 110
            AI                LYVTLEPC        CA  I     +R+     +P     
Sbjct: 56  NAIEDAKDRGHDTR--GATLYVTLEPCSHWGKQPPCADRIIAEGFKRVVVAMKDPHSLVA 113

Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
             G +    A      E+  GI E+ ++++ + F K
Sbjct: 114 GRGIEKMQRAG----IEVDVGILEEEAKKLNEIFIK 145


>gi|120435954|ref|YP_861640.1| cytidine/deoxycytidylate deaminase family protein [Gramella
           forsetii KT0803]
 gi|117578104|emb|CAL66573.1| cytidine/deoxycytidylate deaminase family protein [Gramella
           forsetii KT0803]
          Length = 149

 Score =  120 bits (301), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 36/97 (37%), Positives = 51/97 (52%), Gaps = 1/97 (1%)

Query: 8   MSCALEEAQNAAL-RNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           MS A++ A+      N  P GAV    ++II+ + N+    +D T HAE+ AI+  CR L
Sbjct: 11  MSRAIDLAREGRDMDNGGPFGAVITKGDEIIAESCNKVLAKEDCTEHAELRAIQKACRKL 70

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
           +   L    L+ + EPC MC  A   A    +YYGAS
Sbjct: 71  NSSSLQGCVLFTSCEPCMMCLGAAYWADFDNIYYGAS 107


>gi|146308871|ref|YP_001189336.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Pseudomonas mendocina ymp]
 gi|145577072|gb|ABP86604.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Pseudomonas
           mendocina ymp]
          Length = 371

 Score =  120 bits (301), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 37/154 (24%), Positives = 58/154 (37%), Gaps = 21/154 (13%)

Query: 2   KKGNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
           ++ ++FM+ AL  A+           VG V V + +I+    +          HAE+ A+
Sbjct: 3   ERDHLFMARALRLARKGLYSTHPNPRVGCVIVRDGEIVGEGWHARAGE----PHAEVHAL 58

Query: 60  RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113
           R        E       YVTLEPC        CA A+  A + R+     +P       G
Sbjct: 59  RQAG-----ERARGATAYVTLEPCSHHGRTPPCADALVAAGVGRVVAAMQDPNPQVAGRG 113

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
                L   +   E+  G+ E  +R +   F K 
Sbjct: 114 L----LRLANAGIEVLSGVLEAEARALNVGFIKR 143


>gi|50303913|ref|XP_451904.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
 gi|49641036|emb|CAH02297.1| KLLA0B08437p [Kluyveromyces lactis]
          Length = 152

 Score =  120 bits (301), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 33/149 (22%), Positives = 54/149 (36%), Gaps = 11/149 (7%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLN--NKIISRAGNRNRELKDVTAHAEILAI 59
           +     M  A EEA        +P+G   + N   +I+    N   +    T H E   +
Sbjct: 3   EWDKKGMDKAYEEAAIGYKEGGVPIGGCLIDNLTGEILGSGHNMRFQKGSPTLHGETSTL 62

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
               R+    +     +Y TL PC MC  AI L  I R+  G           G ++   
Sbjct: 63  ENAGRLKGS-VYKHCTMYTTLSPCDMCTGAILLYGIGRVVVG---ENVNFKSPGEKYLAE 118

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKER 148
                       + ++R  +I++DF  +R
Sbjct: 119 RGIEVKV-----VDDERCIEIMKDFIAKR 142


>gi|322807186|emb|CBZ04760.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Clostridium
           botulinum H04402 065]
          Length = 365

 Score =  120 bits (301), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 42/156 (26%), Positives = 63/156 (40%), Gaps = 25/156 (16%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56
           M+  N +M  AL+ A+      ++   P VGA+ V NNKII    ++         HAE+
Sbjct: 1   MEDYNFYMEKALKLAERG--EGKVNPNPKVGAIVVKNNKIIGEGYHKYFGG----PHAEV 54

Query: 57  LAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGI 110
            A+R        E      +YVTLEPC        CA +I    I +      +P     
Sbjct: 55  YALREAG-----ERAKGATIYVTLEPCSHYGKTPPCAESIVKMGISKAIIAMKDPNPLVE 109

Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
             G             E+  GI E+ S+++ + F K
Sbjct: 110 GRGIDILKQNG----IEVVTGIMEKESKKLNEVFIK 141


>gi|306820099|ref|ZP_07453747.1| riboflavin biosynthesis protein RibD [Eubacterium yurii subsp.
           margaretiae ATCC 43715]
 gi|304551877|gb|EFM39820.1| riboflavin biosynthesis protein RibD [Eubacterium yurii subsp.
           margaretiae ATCC 43715]
          Length = 365

 Score =  119 bits (300), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 37/150 (24%), Positives = 63/150 (42%), Gaps = 21/150 (14%)

Query: 4   GNVFMSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
              +M  A++ A+N   R    P VGAV V +N+II R  +         AHAE+ A+  
Sbjct: 6   DKKYMKLAIDLAKNGIGRTSPNPIVGAVIVKDNQIIGRGWHEKYGE----AHAEVNALDN 61

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
            C++          +YVTLEPC        C + I  + I  +  G+ +P       G+Q
Sbjct: 62  -CQVSPN----GATMYVTLEPCCHFGKQPPCTSKIIESGISHVVIGSFDPNPQVSGKGSQ 116

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
                  +   ++   + ++   ++   FF
Sbjct: 117 ILK----NSEIKVTQSVLQRECDELNTVFF 142


>gi|300775167|ref|ZP_07085029.1| riboflavin biosynthesis protein RibD [Chryseobacterium gleum ATCC
           35910]
 gi|300505907|gb|EFK37043.1| riboflavin biosynthesis protein RibD [Chryseobacterium gleum ATCC
           35910]
          Length = 341

 Score =  119 bits (300), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 41/161 (25%), Positives = 69/161 (42%), Gaps = 24/161 (14%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57
           M    +++   +E AQ A  +   P   VG+V V N +II    +          HAEI 
Sbjct: 1   MNNDELYIKRCIELAQKALGKT-YPNPLVGSVIVHNGEIIGEGYHHKAGEN----HAEIN 55

Query: 58  AIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIE 111
           AI     + +++++PE  +YV+LEPC        CA  I     +++  GA +       
Sbjct: 56  AINS---VKNKDLIPESTIYVSLEPCAHYGKTPPCALKIRELGFKKVVIGAMDSHDKVNG 112

Query: 112 NGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF---KERR 149
            G +    A      E   GI E+   ++ + FF   +++R
Sbjct: 113 KGKKIIQEAG----IEAVSGILEKECIELNKRFFTYHEKKR 149


>gi|164687268|ref|ZP_02211296.1| hypothetical protein CLOBAR_00909 [Clostridium bartlettii DSM
           16795]
 gi|164603692|gb|EDQ97157.1| hypothetical protein CLOBAR_00909 [Clostridium bartlettii DSM
           16795]
          Length = 370

 Score =  119 bits (300), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 38/152 (25%), Positives = 64/152 (42%), Gaps = 21/152 (13%)

Query: 2   KKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
           ++ N +M  ALE A+      N  P VG + V + K+I    +          HAE+ AI
Sbjct: 8   QEDNYYMKKALELAKLGIGAVNPNPLVGCIIVKDGKVIGEGYHMKFGE----PHAEVNAI 63

Query: 60  RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113
                   +E +    +YVTLEPC        CA  +   +++R+    ++P      NG
Sbjct: 64  NSA-----KEDIEGATVYVTLEPCSHFGKTPPCADNLVRHKVKRVVICNNDPNPLVAGNG 118

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
            +       +   E+  GI E+   ++ + FF
Sbjct: 119 IKKLQ----NAGIEVTTGILEEEGLKLNEVFF 146


>gi|222480528|ref|YP_002566765.1| CMP/dCMP deaminase zinc-binding [Halorubrum lacusprofundi ATCC
           49239]
 gi|222453430|gb|ACM57695.1| CMP/dCMP deaminase zinc-binding [Halorubrum lacusprofundi ATCC
           49239]
          Length = 174

 Score =  119 bits (300), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 34/142 (23%), Positives = 59/142 (41%), Gaps = 4/142 (2%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
               ++  A+E A+ A      P GA+ VL+ +I++ A N      D+ AH E+   R  
Sbjct: 25  SDRKYVDRAIELAEEAVEMGNTPFGALLVLDGEIVAEAHNETLTEDDLAAHPELALARWA 84

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS----NPKGGGIENGTQFYT 118
            R L  +      +Y + EPC MCA  I  A I R+ +G +    +   G   +      
Sbjct: 85  GRELDVDERARCTMYASTEPCPMCATGIHYAGIGRVVFGVAGETLDGLTGDAVSIPCAEV 144

Query: 119 LATCHHSPEIYPGISEQRSRQI 140
           +        +   I+E  + ++
Sbjct: 145 IRRAGGDTTVEGPIAEAAAMEL 166


>gi|195953373|ref|YP_002121663.1| CMP/dCMP deaminase zinc-binding [Hydrogenobaculum sp. Y04AAS1]
 gi|195932985|gb|ACG57685.1| CMP/dCMP deaminase zinc-binding [Hydrogenobaculum sp. Y04AAS1]
          Length = 147

 Score =  119 bits (300), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 45/141 (31%), Positives = 69/141 (48%), Gaps = 7/141 (4%)

Query: 9   SCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQ 68
              LE  + A  ++ IPV A+   N++I+S A N  +       HAEILAI     +L+ 
Sbjct: 8   QKLLELCKEAIAQDRIPVSALVTKNDEIVSWAFNGIKS----IEHAEILAIEKAMNVLNT 63

Query: 69  EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEI 128
           + L   D+YV+LEPC MC  AISLARI ++Y+ + + K G I +              E 
Sbjct: 64  KRLDGCDIYVSLEPCPMCTYAISLARIEKVYFFSLDDKNGAILSNANIIDKFELKLKWEY 123

Query: 129 YPGISEQRSRQIIQDFFKERR 149
                      +++ +FK +R
Sbjct: 124 KKN---ADFENMLKGYFKNKR 141


>gi|19076024|ref|NP_588524.1| cytosine deaminase (predicted) [Schizosaccharomyces pombe 972h-]
 gi|74626752|sp|O59834|FCYS_SCHPO RecName: Full=Probable cytosine deaminase; AltName: Full=Cytosine
           aminohydrolase
 gi|3136043|emb|CAA19074.1| cytosine deaminase (predicted) [Schizosaccharomyces pombe]
          Length = 162

 Score =  119 bits (300), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 45/156 (28%), Positives = 69/156 (44%), Gaps = 17/156 (10%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIR 60
           +K   ++  A++ +Q A    + P G + V  N+ +I  AGNR     DVT HAE  A+ 
Sbjct: 8   EKDLAYLREAIKVSQQARDEGQHPFGCIIVDENDNVIMSAGNRV-PDGDVTQHAETRAV- 65

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNP-------KGGGI--- 110
            G    ++  L +  LY + EPC MC+ AI  + IRR+ +G SN        K G     
Sbjct: 66  -GLITKTRRDLEKCTLYTSTEPCAMCSGAIFWSGIRRMIFGLSNENLIKLTQKSGECPPL 124

Query: 111 -ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
             N       A+  H  E+     E  +    + F+
Sbjct: 125 YINSRDILGAAS--HPIEVVGPYIEDEAIIPHKGFW 158


>gi|283781867|ref|YP_003372622.1| CMP/dCMP deaminase zinc-binding protein [Pirellula staleyi DSM
           6068]
 gi|283440320|gb|ADB18762.1| CMP/dCMP deaminase zinc-binding protein [Pirellula staleyi DSM
           6068]
          Length = 157

 Score =  119 bits (300), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 43/153 (28%), Positives = 63/153 (41%), Gaps = 16/153 (10%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVL--NNKIISRAGNRNRELKDVTAHAEILAIRM 61
              +M  A+E A++       P GAV V   + KII+   N++    + T H EI+A+  
Sbjct: 13  DESYMRAAIELARHVPQL---PFGAVIVDRSSGKIIAGGFNQSAM--NPTWHGEIVALND 67

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIE-NGTQFYTLA 120
             +    +  P + LY T EPC MC  AI  ++I  L YG S                  
Sbjct: 68  LAQRGLHDR-PSLALYTTAEPCPMCMGAILWSQIEELIYGTSIRFLQQTGWRQIDILASE 126

Query: 121 TCHHSP----EIYPGISEQRSRQIIQDFFKERR 149
               SP     I PG+ E+    +   F + RR
Sbjct: 127 VLARSPLGKCTIVPGVLEEECNAL---FVEARR 156


>gi|327399584|ref|YP_004340453.1| riboflavin biosynthesis protein RibD [Hippea maritima DSM 10411]
 gi|327182213|gb|AEA34394.1| riboflavin biosynthesis protein RibD [Hippea maritima DSM 10411]
          Length = 375

 Score =  119 bits (300), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 39/156 (25%), Positives = 66/156 (42%), Gaps = 22/156 (14%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57
           M K  +FM  A+E A+ A  +   P   VGAV V   KII +  ++   L     HAE+ 
Sbjct: 13  MNKDELFMKKAIELAKKAKNKT-CPNPLVGAVIVKEGKIIGQGYHKKAGL----PHAEVE 67

Query: 58  AIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIE 111
           AI     +  +  L +  +YV LEPC        C+ AI  + I+R+  G  +       
Sbjct: 68  AINS---VKDRNQLKDATIYVNLEPCNHYGRTPPCSLAIINSGIKRVVIGMRDINKKASG 124

Query: 112 NGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
              +           ++  G+ E  ++++ + F + 
Sbjct: 125 GIERLKGA-----GIDVKVGVLEDEAKKLNEVFIEN 155


>gi|76798747|ref|ZP_00780965.1| riboflavin biosynthesis protein RibD [Streptococcus agalactiae
           18RS21]
 gi|76585902|gb|EAO62442.1| riboflavin biosynthesis protein RibD [Streptococcus agalactiae
           18RS21]
          Length = 362

 Score =  119 bits (300), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 37/147 (25%), Positives = 61/147 (41%), Gaps = 25/147 (17%)

Query: 8   MSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
           M+ AL+EA+       +   P VGAV V +++IIS+  ++         HAE  AI+   
Sbjct: 1   MALALKEAEKGM--GFVAPNPLVGAVIVKDDRIISKGYHKRFGDL----HAERQAIKNA- 53

Query: 64  RILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFY 117
                E +    LYVTLEPC        C  A+  + I+++  G+ +P       G    
Sbjct: 54  ----DEDISGSTLYVTLEPCCHVGKQPPCTEALIKSGIKKVVVGSLDPNPLVSGKGIALL 109

Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDF 144
                +    +  GI  +    + + F
Sbjct: 110 RKEGLN----VEVGILREECDALNERF 132


>gi|114566748|ref|YP_753902.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase
           [Syntrophomonas wolfei subsp. wolfei str. Goettingen]
 gi|114337683|gb|ABI68531.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase /
           diaminohydroxyphosphoribosylaminopyrimidine deaminase
           [Syntrophomonas wolfei subsp. wolfei str. Goettingen]
          Length = 367

 Score =  119 bits (300), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 42/153 (27%), Positives = 58/153 (37%), Gaps = 20/153 (13%)

Query: 2   KKGNVFMSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
                FM  ALE A  A  R    P VGAV V + +I+    ++       T HAEI A+
Sbjct: 4   NDDQRFMQRALELAARARGRTSPNPLVGAVLVKDGQILGEGYHQRA----GTPHAEINAL 59

Query: 60  RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113
               R    E      +YV LEPC        CA A+  A +  +     +P       G
Sbjct: 60  NTAGR----ERAKGASIYVNLEPCSHYGRTAPCALALVEAGVAEVVIATLDPNPQVSGRG 115

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
            Q    A          G+    +R++ + FFK
Sbjct: 116 VQILQEAGIKTRV----GVLTAEARELNEFFFK 144


>gi|328883182|emb|CCA56421.1| Cytosine deaminase [Streptomyces venezuelae ATCC 10712]
          Length = 168

 Score =  119 bits (300), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 33/141 (23%), Positives = 57/141 (40%), Gaps = 15/141 (10%)

Query: 6   VFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
            +++ AL EA+       +PVGA     +  ++ R  NR  +  D +AHAE  A R   R
Sbjct: 26  QWLATALAEARAGRDEGGVPVGAALYGADGALLGRGHNRRVQDGDPSAHAETAAFRAAGR 85

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
             S        +  TL PC  C+  +    I R+  G +    GG +   +        H
Sbjct: 86  QRS---YRGTTMVTTLSPCWYCSGLVRQFGISRVVVGEAETFHGGHDWLAE--------H 134

Query: 125 SPEIYPGISEQ-RSRQIIQDF 144
             E+   + +      ++++F
Sbjct: 135 GVEVL--VLDDPECAALMREF 153


>gi|291521186|emb|CBK79479.1| Cytosine/adenosine deaminases [Coprococcus catus GD/7]
          Length = 159

 Score =  119 bits (300), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 28/107 (26%), Positives = 42/107 (39%), Gaps = 1/107 (0%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAI 59
           M+    ++  A+E +  +      P  A+ V  +  II    N        T HAE   +
Sbjct: 1   MQSHEAYLKRAIELSVKSRESGNTPFAALLVDKDGNIIMEQMNNEITEHKCTGHAETQLV 60

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPK 106
                  S+E L +  LY T EPC MC+ AI    I  + Y  +   
Sbjct: 61  ERASHAYSKEFLWDCTLYTTAEPCAMCSGAIYWGNIGHVVYAMTEKD 107


>gi|111021958|ref|YP_704930.1| guanine deaminase [Rhodococcus jostii RHA1]
 gi|110821488|gb|ABG96772.1| possible guanine deaminase [Rhodococcus jostii RHA1]
          Length = 161

 Score =  119 bits (300), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 36/105 (34%), Positives = 47/105 (44%), Gaps = 1/105 (0%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
               +  A+E A         P GAVAV  +  +IS   N      DVT HAE+ AI   
Sbjct: 10  DLAHLRRAIELADETGDAGNRPFGAVAVGADGHVISEGANSVATSADVTEHAELDAITTA 69

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKG 107
           C       L    +Y + EPC MC+AA+  A I R+ Y AS+   
Sbjct: 70  CGEGRTGDLVGATMYASGEPCPMCSAAMVWAGITRVVYAASSADF 114


>gi|188591891|ref|YP_001796489.1| guanine deaminase [Cupriavidus taiwanensis LMG 19424]
 gi|170938265|emb|CAP63250.1| Guanine deaminase [Cupriavidus taiwanensis LMG 19424]
          Length = 145

 Score =  119 bits (300), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 32/100 (32%), Positives = 49/100 (49%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  A+  A     R   P GAV VL+ ++++   N      D T HAE+ A+R   R L 
Sbjct: 1   MREAVRLAVANRDRGARPFGAVLVLDGEVVATGVNDIVHSHDPTTHAEMEAVRAAARKLG 60

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKG 107
           +  L    +Y +  PC MC AA+++A ++ +YY   N   
Sbjct: 61  RPDLRGSVVYASGHPCPMCLAAMTMAGVQAVYYAFDNHDA 100


>gi|325971024|ref|YP_004247215.1| CMP/dCMP deaminase zinc-binding protein [Spirochaeta sp. Buddy]
 gi|324026262|gb|ADY13021.1| CMP/dCMP deaminase zinc-binding protein [Spirochaeta sp. Buddy]
          Length = 156

 Score =  119 bits (300), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 36/115 (31%), Positives = 50/115 (43%), Gaps = 1/115 (0%)

Query: 3   KGNVFMSCALEEAQNAALRN-EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
               ++  A+E+A+   L+N   P GA+ V     +  A N      D TAHAE+  IR 
Sbjct: 2   DERTYLIQAVEKARETMLQNLGGPFGALLVDTQGQVFVASNTVLGSNDPTAHAEVNVIRQ 61

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116
            C+      L    LY T  PC MC +A   A I+ +YYG +      I     F
Sbjct: 62  VCKQKGTHDLQGCILYTTCYPCPMCLSACIWANIKEVYYGCTAQDAEAIGFRDDF 116


>gi|158429187|pdb|2O3K|A Chain A, Yeast Cytosine Deaminase D92e Triple Mutant Bound To
           Transition State Analogue Hpy
 gi|158429188|pdb|2O3K|B Chain B, Yeast Cytosine Deaminase D92e Triple Mutant Bound To
           Transition State Analogue Hpy
          Length = 161

 Score =  119 bits (300), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 38/150 (25%), Positives = 62/150 (41%), Gaps = 13/150 (8%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAI 59
           K     M  A EEA        +P+G   +   +  ++ R  N   +    T H EI  +
Sbjct: 12  KWDQKGMDIAYEEALLGYKEGGVPIGGCLINNKDGSVLGRGHNMRFQKGSATLHGEISTL 71

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS-NPKGGGIENGTQFYT 118
               R+   ++  +  LY TL PC MC  AI +  I R   G + N K  G +       
Sbjct: 72  ENCGRLEG-KVYKDTTLYTTLSPCEMCTGAIIMYGIPRCVIGENVNFKSKGEK------Y 124

Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKER 148
           L T  H   +   + ++R +++++ F  ER
Sbjct: 125 LQTRGHEVVV---VDDERCKKLMKQFIDER 151


>gi|255009912|ref|ZP_05282038.1| putative riboflavin biosynthesis protein [includes:
           diaminohydroxyphosphoribosylaminopyrimidine deaminase
           [Bacteroides fragilis 3_1_12]
 gi|313147700|ref|ZP_07809893.1| riboflavin biosynthesis protein ribD [Bacteroides fragilis 3_1_12]
 gi|313136467|gb|EFR53827.1| riboflavin biosynthesis protein ribD [Bacteroides fragilis 3_1_12]
          Length = 346

 Score =  119 bits (299), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 41/152 (26%), Positives = 64/152 (42%), Gaps = 20/152 (13%)

Query: 1   MKKGNVFMSCALEEAQNAALR--NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           M++   +M   ++ A+N          VGAV V + +II    +         AHAE+ A
Sbjct: 1   MEE-EKYMRRCIQLARNGLCNVSPNPMVGAVIVCDEQIIGEGYHVRCGE----AHAEVNA 55

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
           IR    +    +L    +YV+LEPC        CA  I   +I ++  G  +P       
Sbjct: 56  IRS---VKDPSLLKRSTIYVSLEPCSHHGKTPPCADLIIEKQIPKIVIGCQDPFSKVAGK 112

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
           G Q    A      E+  G+ E+  R++IQ F
Sbjct: 113 GIQKLRNAGR----EVIVGVLEKECRELIQKF 140


>gi|294953511|ref|XP_002787800.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
 gi|239902824|gb|EER19596.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
          Length = 319

 Score =  119 bits (299), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 37/118 (31%), Positives = 53/118 (44%), Gaps = 3/118 (2%)

Query: 3   KGNVFMSCALEEAQNAALRNEI-PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
               FM  A+  A       E  P GA    N+ ++  A N     +D T HAE+ AIRM
Sbjct: 33  SHEQFMEAAVLSATTGVKLKEGGPFGACITRNDVVVCCAHNTFFSDRDPTCHAEMNAIRM 92

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
              +L  + L    +Y + EPC MC  AI  + IR LY G    +    +NG ++ + 
Sbjct: 93  AMHLLKTDDLAGCVIYSSFEPCPMCWGAILASGIRLLYVGL--DRHTAAKNGVEYLSF 148



 Score = 44.1 bits (104), Expect = 0.007,   Method: Composition-based stats.
 Identities = 26/123 (21%), Positives = 42/123 (34%), Gaps = 6/123 (4%)

Query: 28  AVAV-LNNKIISRAGNRN--RELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84
            + V  ++KII+   N        D      +  IR+ CR ++   L    ++   EP  
Sbjct: 186 CIIVNKDSKIIA-DSNTPSIESFTDSVDTPMVKTIRLACRAINSPYLQGCKIFTLEEPDV 244

Query: 85  MCAAAISLARIRRLYYGASNPKGGG-IENGTQFYTLATCHHSPEIYPGISEQRSRQIIQD 143
              AA   A +  L+Y  S    G         Y L   +    +  G        II  
Sbjct: 245 ESHAACLWALVDSLHY-CSEALPGSRARYQRDQYELEPSNRDIRVVYGCGVDTCLSIIPV 303

Query: 144 FFK 146
           +F+
Sbjct: 304 WFQ 306


>gi|50083486|ref|YP_044996.1| putative cytidine and deoxycytidylate deaminase zinc-binding
           protein [Acinetobacter sp. ADP1]
 gi|49529462|emb|CAG67174.1| putative cytidine and deoxycytidylate deaminase zinc-binding
           protein [Acinetobacter sp. ADP1]
          Length = 184

 Score =  119 bits (299), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 39/156 (25%), Positives = 60/156 (38%), Gaps = 11/156 (7%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRE-LKDVTAHAEILAI 59
           ++   F+      A+    +   P  A+ V  +  I++ AGN +     D T HAE +A 
Sbjct: 29  EQDLYFLRKTFALAEQTKAQGLHPFAAIVVDADGNIVTEAGNNSLPPTGDPTRHAETVAA 88

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIE-------- 111
               R+ S + L    LY   EPC MCA AI    I R+ YG S  K   I         
Sbjct: 89  GQAARLKSLKELRTCTLYTNAEPCAMCAGAIYWTGIGRVVYGMSEKKLLSITGDHPENPT 148

Query: 112 -NGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
            +       A+     E+      + +    Q F++
Sbjct: 149 LSLPCRTVFASGQRGIEVIGPCLSEEAAVAHQGFWQ 184


>gi|77409347|ref|ZP_00786049.1| riboflavin biosynthesis protein RibD [Streptococcus agalactiae
           COH1]
 gi|77172049|gb|EAO75216.1| riboflavin biosynthesis protein RibD [Streptococcus agalactiae
           COH1]
          Length = 362

 Score =  119 bits (299), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 37/147 (25%), Positives = 61/147 (41%), Gaps = 25/147 (17%)

Query: 8   MSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
           M+ AL+EA+       +   P VGAV V +++IIS+  ++         HAE  AI+   
Sbjct: 1   MALALKEAEKGM--GFVAPNPLVGAVIVKDDRIISKGYHKRFGDL----HAERQAIKNA- 53

Query: 64  RILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFY 117
                E +    LYVTLEPC        C  A+  + I+++  G+ +P       G    
Sbjct: 54  ----DEDISGSTLYVTLEPCCHVGKQPPCTEALIKSGIKKVVVGSLDPNPLVSGKGIALL 109

Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDF 144
                +    +  GI  +    + + F
Sbjct: 110 RKEGLN----VEVGILREECDALNERF 132


>gi|294783803|ref|ZP_06749125.1| riboflavin biosynthesis protein RibD [Fusobacterium sp. 1_1_41FAA]
 gi|294479615|gb|EFG27394.1| riboflavin biosynthesis protein RibD [Fusobacterium sp. 1_1_41FAA]
          Length = 369

 Score =  119 bits (299), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 42/158 (26%), Positives = 62/158 (39%), Gaps = 27/158 (17%)

Query: 1   MKK--GNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHA 54
           M K     FM+ A+E A        +   P VGAV V + KII    ++         HA
Sbjct: 1   MDKTVDEKFMARAIELAFRGL--GGVNPNPLVGAVVVKDGKIIGEGWHKKYGG----PHA 54

Query: 55  EILAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGG 108
           E+ A+         E      +YVTLEPC        CA  I  A I+R      +P   
Sbjct: 55  EVWALNEAG-----EEAKGATIYVTLEPCSHQGKTPPCAKRIVEAGIKRCVIACVDPNPL 109

Query: 109 GIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
               G +    A      ++  GI E+ ++++ + F K
Sbjct: 110 VAGKGIKIIEDAG----IKVDFGILEKEAKEVNKVFLK 143


>gi|313635947|gb|EFS01887.1| tRNA-specific adenosine deaminase [Listeria seeligeri FSL S4-171]
          Length = 81

 Score =  119 bits (299), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 30/73 (41%), Positives = 45/73 (61%)

Query: 77  YVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQR 136
           YVTLEPC MC+ AI L+RI ++YYGA +PK G   +          +H+ E+  G+ E  
Sbjct: 1   YVTLEPCPMCSGAILLSRIDKVYYGAKDPKAGTAGSLMNLLQDDRFNHTCEVESGLMEAE 60

Query: 137 SRQIIQDFFKERR 149
           S ++++ FF+E R
Sbjct: 61  SSEMLKSFFQELR 73


>gi|160896585|ref|YP_001562167.1| CMP/dCMP deaminase [Delftia acidovorans SPH-1]
 gi|160362169|gb|ABX33782.1| CMP/dCMP deaminase zinc-binding [Delftia acidovorans SPH-1]
          Length = 171

 Score =  119 bits (299), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 37/101 (36%), Positives = 56/101 (55%), Gaps = 1/101 (0%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIR 60
           ++  +++  A+  A  A  R   P GA+ V  + ++++ A N N E  D TAHAE+ AIR
Sbjct: 16  ERDGLYLRRAIAMADRARQRGNRPFGALIVAADGRVLAEASNANGESGDCTAHAELSAIR 75

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
           +   +  +E L    LY + EPC MCA AI  + I R+ YG
Sbjct: 76  LASPLHDREALSAATLYSSAEPCVMCAGAIFWSAIGRVVYG 116


>gi|295102179|emb|CBK99724.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase
           /5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Faecalibacterium prausnitzii L2-6]
          Length = 374

 Score =  119 bits (299), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 36/151 (23%), Positives = 55/151 (36%), Gaps = 21/151 (13%)

Query: 3   KGNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
               +M  AL+ A+           VGAV     +II +  ++        AHAE  A+ 
Sbjct: 2   NDKEYMRLALQLAKKGCGWTSPNPMVGAVVAKEGRIIGQGWHQRYGQ----AHAERNAL- 56

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
                   E      LYVTLEPC        C  AI  A I R+  G+++P       G 
Sbjct: 57  ----ASCTEDPQGATLYVTLEPCCHYGKQPPCVDAILGAGIHRVVVGSADPNPLVAGKGI 112

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
                    H  ++   + ++    + + FF
Sbjct: 113 TILRA----HGIDVTENVLQEECDALNKVFF 139


>gi|254173530|ref|ZP_04880202.1| riboflavin biosynthesis protein RibD [Thermococcus sp. AM4]
 gi|214032222|gb|EEB73052.1| riboflavin biosynthesis protein RibD [Thermococcus sp. AM4]
          Length = 360

 Score =  119 bits (299), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 40/155 (25%), Positives = 60/155 (38%), Gaps = 22/155 (14%)

Query: 2   KKGNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57
            +   FM  ALE A+       +   P VGAV V + ++I    +R    K    HAE+ 
Sbjct: 3   SEDERFMRLALELAKRG--EGWVNPNPMVGAVIVKDGEVIGVGWHRRFGEK----HAEVN 56

Query: 58  AIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIE 111
           AI           +    +YVTLEPC        CA  I     +R+     +P      
Sbjct: 57  AIEDA--KSRGHDVRGATMYVTLEPCSHWGKQPPCADRIIKEGFKRVVVAMVDPNPLVSG 114

Query: 112 NGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
            G +    A      E+  G+ E  +R++ + F K
Sbjct: 115 RGIEKMRKAG----IEVEVGVLEDEARRLNEIFIK 145


>gi|255528573|ref|ZP_05395347.1| riboflavin biosynthesis protein RibD [Clostridium carboxidivorans
           P7]
 gi|296188130|ref|ZP_06856522.1| riboflavin biosynthesis protein RibD [Clostridium carboxidivorans
           P7]
 gi|255507738|gb|EET84204.1| riboflavin biosynthesis protein RibD [Clostridium carboxidivorans
           P7]
 gi|296047256|gb|EFG86698.1| riboflavin biosynthesis protein RibD [Clostridium carboxidivorans
           P7]
          Length = 370

 Score =  119 bits (299), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 37/153 (24%), Positives = 63/153 (41%), Gaps = 25/153 (16%)

Query: 4   GNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
              +M  AL  A     +  +   P VGAV V N  I+ +  ++         HAE+ A+
Sbjct: 9   DEYYMKMALNLALKG--QGNVNPNPLVGAVIVNNGNIVGQGYHKFYGG----PHAEVYAL 62

Query: 60  RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113
           +        E     +LYV+LEPC        CA A+  A I+++     +P      NG
Sbjct: 63  KEAG-----ESAKGGELYVSLEPCSHYGKTPPCAEAVLKAGIKKVVIAMKDPNSLVAGNG 117

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
            +           E+  G+ E+ ++++ + F K
Sbjct: 118 IKLLEKNG----VEVIVGVLEEEAKKVNEIFIK 146


>gi|182626736|ref|ZP_02954476.1| riboflavin biosynthesis protein RibD [Clostridium perfringens D
           str. JGS1721]
 gi|177907904|gb|EDT70496.1| riboflavin biosynthesis protein RibD [Clostridium perfringens D
           str. JGS1721]
          Length = 366

 Score =  119 bits (299), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 39/149 (26%), Positives = 57/149 (38%), Gaps = 21/149 (14%)

Query: 4   GNVFMSCALEEAQNAAL-RNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
              FM  ALE A+      N  P VGAV V + +II +  +          HAEI AI  
Sbjct: 2   DEFFMKKALELARKGEGYVNPNPLVGAVIVKDGEIIGQGYHEFFGGN----HAEINAINS 57

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
             +           +YVTLEPC        C  AI   R +R+  G  +P         +
Sbjct: 58  SIKST-----EGATIYVTLEPCCHYGKTPPCVEAIIKNRFKRVVVGNLDPNPLVSGKSIK 112

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDF 144
               +      E+  G+ E+   ++ + F
Sbjct: 113 ILRESG----IEVKVGVLEKECIRLNEIF 137


>gi|39970877|ref|XP_366829.1| hypothetical protein MGG_02905 [Magnaporthe oryzae 70-15]
 gi|149210385|ref|XP_001522567.1| hypothetical protein MGCH7_ch7g670 [Magnaporthe oryzae 70-15]
 gi|86196625|gb|EAQ71263.1| hypothetical protein MGCH7_ch7g670 [Magnaporthe oryzae 70-15]
 gi|145017270|gb|EDK01633.1| hypothetical protein MGG_02905 [Magnaporthe oryzae 70-15]
          Length = 593

 Score =  119 bits (299), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 41/162 (25%), Positives = 64/162 (39%), Gaps = 44/162 (27%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR--- 60
              F+  AL+ A+ A   NE PVG V V   ++I+R  N     ++ T HAE +A+    
Sbjct: 209 HQGFIEEALDMARLALKTNETPVGCVLVYRGRVIARGMNATNITRNGTRHAEYMALSSLF 268

Query: 61  ------------------------MGCRILSQEILP-----------------EVDLYVT 79
                                       +    + P                 E  LYVT
Sbjct: 269 GTKPDAPPPSHPSCKHEVDDPGEWDAVDVTKSYLYPYGQKLHPSPHVTASIVQESTLYVT 328

Query: 80  LEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
           +EPC MCA+ +   +I+++Y+GA N K GG     + +  +T
Sbjct: 329 VEPCVMCASLLKQLKIKKVYFGAVNDKFGGTGGVFRIHKNST 370


>gi|220913945|ref|YP_002489254.1| CMP/dCMP deaminase zinc-binding [Arthrobacter chlorophenolicus A6]
 gi|219860823|gb|ACL41165.1| CMP/dCMP deaminase zinc-binding [Arthrobacter chlorophenolicus A6]
          Length = 164

 Score =  119 bits (299), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 34/120 (28%), Positives = 51/120 (42%), Gaps = 2/120 (1%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
             F++ ++  A    L +  P GA+ V  + K      NR     D TAHAE+ AIR  C
Sbjct: 8   EQFLARSIRLATANVLNSGGPFGAMIVTADGKTF-DGVNRVTADNDPTAHAEVTAIRTAC 66

Query: 64  RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123
           R +    L    LY + EPC MC A+   AR+ R+ + A       +      +     +
Sbjct: 67  REMGTFDLSGAVLYTSCEPCPMCLASALWARVERVVFAADRHDAASVGFDDAVFYEYFDN 126


>gi|154505762|ref|ZP_02042500.1| hypothetical protein RUMGNA_03302 [Ruminococcus gnavus ATCC 29149]
 gi|153793780|gb|EDN76200.1| hypothetical protein RUMGNA_03302 [Ruminococcus gnavus ATCC 29149]
          Length = 159

 Score =  119 bits (299), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 35/106 (33%), Positives = 48/106 (45%), Gaps = 1/106 (0%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +    ++  A+E ++ A      P GA+ V    +II   GN     K  T HAE     
Sbjct: 3   QSHEFYLRRAIEISKEAREAGNTPFGALLVNKEGEIIMEQGNIEITEKICTGHAEATLAA 62

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPK 106
                 S+E L +  LY T EPC MCA AI  A I R+ YG +  +
Sbjct: 63  RASHEYSREFLWDCTLYTTAEPCAMCAGAIYWANIGRVVYGMTERR 108


>gi|323693355|ref|ZP_08107571.1| riboflavin biosynthesis protein [Clostridium symbiosum WAL-14673]
 gi|323502599|gb|EGB18445.1| riboflavin biosynthesis protein [Clostridium symbiosum WAL-14673]
          Length = 370

 Score =  119 bits (299), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 38/157 (24%), Positives = 56/157 (35%), Gaps = 21/157 (13%)

Query: 1   MKKGNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           M     +M  AL  A+           VGAV V   ++I R  ++         HAE  A
Sbjct: 1   MLNDEKYMRMALSLARKGCGLAAPNPMVGAVIVKEGRVIGRGYHQKYGG----PHAEQNA 56

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
           +         E      +YVTLEPC        C  AI  A I R+  G+++P       
Sbjct: 57  L-----SSCTEPPQGAVMYVTLEPCCHSGKQPPCVKAILRAGISRVVVGSADPNPLVGGK 111

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
           G +        H   +   I  +   ++ + FF   R
Sbjct: 112 GIRILRE----HGVSVTEDILREECAKLNEVFFHYIR 144


>gi|290958302|ref|YP_003489484.1| zinc-binding protein [Streptomyces scabiei 87.22]
 gi|260647828|emb|CBG70933.1| putative zinc-binding protein [Streptomyces scabiei 87.22]
          Length = 161

 Score =  119 bits (299), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 34/145 (23%), Positives = 60/145 (41%), Gaps = 15/145 (10%)

Query: 6   VFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
            +++ A+EEA+       IP+GA     +  ++ R  NR  +  D + HAE  A R   R
Sbjct: 8   AWLATAVEEARTGLAEGGIPIGAALYGPDGTLLGRGHNRRVQDGDPSTHAETAAFRAAGR 67

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
             +        +  TL PC  C+  +    I R+  G +    GG +   +        H
Sbjct: 68  QRT---YRGTTMVTTLSPCWYCSGLVRQFGISRVVVGEATTFHGGHDWLAE--------H 116

Query: 125 SPEIYPGISEQ-RSRQIIQDFFKER 148
             EI   + +      +++DF ++R
Sbjct: 117 GVEIV--LLDDPECVALMRDFVRQR 139


>gi|229820162|ref|YP_002881688.1| CMP/dCMP deaminase zinc-binding [Beutenbergia cavernae DSM 12333]
 gi|229566075|gb|ACQ79926.1| CMP/dCMP deaminase zinc-binding [Beutenbergia cavernae DSM 12333]
          Length = 163

 Score =  119 bits (299), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 33/104 (31%), Positives = 50/104 (48%), Gaps = 5/104 (4%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVL-----NNKIISRAGNRNRELKDVTAHAEI 56
            + + F++ A++ A         P GA+ V       + +++   NR     D TAHAE+
Sbjct: 5   SRDSAFLALAVDLATANVADGGGPFGALIVRSDAQPGDHVVATGTNRVTRDHDATAHAEV 64

Query: 57  LAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
            AIR   R +    L  + LY + EPC +C AA   AR+ RL Y
Sbjct: 65  EAIRAAGRAVGSHALTGMTLYASCEPCPLCLAAALWARLDRLVY 108


>gi|88808480|ref|ZP_01123990.1| putative cytidine/deoxycytidylate deaminase [Synechococcus sp. WH
           7805]
 gi|88787468|gb|EAR18625.1| putative cytidine/deoxycytidylate deaminase [Synechococcus sp. WH
           7805]
          Length = 107

 Score =  119 bits (299), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 28/93 (30%), Positives = 50/93 (53%)

Query: 57  LAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116
           +A+R G  +L    +    L VTLEPC MCA A+  AR+ ++ + A + K GG+ +    
Sbjct: 1   MALRQGAWVLGDWRMNHCTLLVTLEPCPMCAGALVQARVGQVIFAAKDRKRGGLGSTINL 60

Query: 117 YTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
               + HH   +  G+ E+ +  ++  +F++RR
Sbjct: 61  ADHESAHHHMHVIGGVMEEEASALLAGWFRQRR 93


>gi|110003913|emb|CAK98253.1| putative cytidine and deoxycytidylate deaminase protein
           [Spiroplasma citri]
          Length = 159

 Score =  118 bits (298), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 41/158 (25%), Positives = 76/158 (48%), Gaps = 20/158 (12%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAI 59
           MK   +  +   + +Q A  +  +P+ A+ V  N KII+   N+      VT HAEI A+
Sbjct: 13  MKDTTLIFNKLYKLSQRAYKKKHVPISALVVDRNGKIIAIGYNKT-TKNSVTTHAEIFAL 71

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
              CR      + +  ++VT+EPC MC  AI  + I+ + Y  SN K G +++       
Sbjct: 72  NQACRKKRTNKISDCSIWVTVEPCMMCLGAIINSGIKVINYYLSNEKYGFLKS------- 124

Query: 120 ATCHHSPEI----YPGISE-QRS---RQIIQDFFKERR 149
              +H+ ++       I + + +   + +++ FF++ R
Sbjct: 125 ---NHTFDVSKLKVQHIRKYEENMILKDLMKKFFEQLR 159


>gi|332977386|gb|EGK14164.1| riboflavin biosynthesis protein RibD [Desmospora sp. 8437]
          Length = 368

 Score =  118 bits (298), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 39/157 (24%), Positives = 64/157 (40%), Gaps = 21/157 (13%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           + +   +M  AL  A+ A  +    P VGAV V + +++    +    LK  T HAE+ A
Sbjct: 5   LTEDERWMELALRLAEAARGQTSPNPLVGAVVVKDGQLLGSGAH----LKAGTPHAEVHA 60

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
           +    +           LYVTLEPC        C      + +RR+  G+++P       
Sbjct: 61  LEQAGKSA-----KGSTLYVTLEPCNHYGRTPPCTERTISSGVRRVVVGSTDPDPLVSGK 115

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
           G Q    A       +  G+   R  ++ + +F  RR
Sbjct: 116 GVQRLREAGL----SVKTGVLADRCTRLNEAYFHHRR 148


>gi|187778552|ref|ZP_02995025.1| hypothetical protein CLOSPO_02147 [Clostridium sporogenes ATCC
           15579]
 gi|187772177|gb|EDU35979.1| hypothetical protein CLOSPO_02147 [Clostridium sporogenes ATCC
           15579]
          Length = 364

 Score =  118 bits (298), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 40/156 (25%), Positives = 62/156 (39%), Gaps = 25/156 (16%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56
           M+  N +M  AL+ A+      ++   P VGA+ + +NKII    ++         HAE+
Sbjct: 1   MEDYNFYMEKALKLAKKG--EGKVNPNPKVGAIVIKDNKIIGEGYHKYFGG----PHAEV 54

Query: 57  LAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGI 110
            A+R               +YVTLEPC        CA AI  A I +      +P     
Sbjct: 55  YALREAGEKA-----KGATIYVTLEPCSHYGKTPPCAKAIVKAGIAKAVIAMKDPNSLVQ 109

Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
             G             E+   I E+ S+++ + F K
Sbjct: 110 GRGIDILKQNG----IEVVTDIMEKESKELNEVFIK 141


>gi|226364462|ref|YP_002782244.1| deaminase [Rhodococcus opacus B4]
 gi|226242951|dbj|BAH53299.1| putative deaminase [Rhodococcus opacus B4]
          Length = 161

 Score =  118 bits (298), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 36/105 (34%), Positives = 47/105 (44%), Gaps = 1/105 (0%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
               +  A+E A         P GAVAV  +  +IS   N      DVT HAE+ AI   
Sbjct: 10  DLAHLRRAIELADETGDAGNRPFGAVAVGADGHVISEGANSVATSADVTEHAELDAITTA 69

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKG 107
           C       L    +Y + EPC MC+AA+  A I R+ Y AS+   
Sbjct: 70  CGEGRTGDLVGATMYASGEPCPMCSAAMVWAGITRVVYAASSADF 114


>gi|224110294|ref|XP_002315474.1| predicted protein [Populus trichocarpa]
 gi|118483375|gb|ABK93588.1| unknown [Populus trichocarpa]
 gi|222864514|gb|EEF01645.1| predicted protein [Populus trichocarpa]
          Length = 186

 Score =  118 bits (298), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 45/120 (37%), Positives = 65/120 (54%), Gaps = 2/120 (1%)

Query: 2   KKGNVFMSCALEEAQNAALRNEI-PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
            + + F++ A+EEA       +  P GAV VLN++++    N   +  D TAHAE+ AIR
Sbjct: 29  DRDHKFLTKAVEEAYKGVDSGDGGPFGAVVVLNDEVVVACHNMVLKHTDPTAHAEVTAIR 88

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
             C+ L+Q  L + ++Y + EPC MC  AI L+RI+RL YGA       I     F   A
Sbjct: 89  EACKKLNQIELSDCEIYASCEPCPMCFGAIHLSRIKRLVYGAKAEAAIAIGF-DDFIADA 147


>gi|271964778|ref|YP_003338974.1| guanine deaminase [Streptosporangium roseum DSM 43021]
 gi|270507953|gb|ACZ86231.1| Guanine deaminase [Streptosporangium roseum DSM 43021]
          Length = 188

 Score =  118 bits (298), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 36/130 (27%), Positives = 52/130 (40%), Gaps = 33/130 (25%)

Query: 7   FMSCALEEAQNAALRN-EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           FM+ A+  A  + +     P G V V +  II+R  NR     D TAH E+ AIR   +I
Sbjct: 6   FMTEAVRLATESVMNGWGGPFGTVIVKDGDIIARGQNRVLLTGDPTAHGEVEAIRKAIQI 65

Query: 66  LSQE--------------------------------ILPEVDLYVTLEPCTMCAAAISLA 93
           L+                                  +L    LY +  PC MC +AI  +
Sbjct: 66  LNPWAPSISEEYQNESTLTLVPRPEGSPDPLPRRAGMLLGCSLYTSGAPCPMCMSAIYWS 125

Query: 94  RIRRLYYGAS 103
           RI  +Y+G+ 
Sbjct: 126 RIDSVYFGSD 135


>gi|156387793|ref|XP_001634387.1| predicted protein [Nematostella vectensis]
 gi|156221469|gb|EDO42324.1| predicted protein [Nematostella vectensis]
          Length = 96

 Score =  118 bits (298), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 37/96 (38%), Positives = 51/96 (53%), Gaps = 2/96 (2%)

Query: 1  MKKGNV-FMSCALEEAQNAALRN-EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
          M++  V F+  A++ ++  + +    P GAV   +NKII+   N +    D TAHAE+ A
Sbjct: 1  MEEYKVQFLERAVQLSKEGSDQGLGTPFGAVITKDNKIIAETANLSFVNCDPTAHAEVSA 60

Query: 59 IRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLAR 94
          IR  C  L    L   DLY +  PC MC AAI  AR
Sbjct: 61 IRQACSALKSRDLTGCDLYTSCYPCAMCMAAIYWAR 96


>gi|298374645|ref|ZP_06984603.1| riboflavin biosynthesis protein RibD [Bacteroides sp. 3_1_19]
 gi|298269013|gb|EFI10668.1| riboflavin biosynthesis protein RibD [Bacteroides sp. 3_1_19]
          Length = 359

 Score =  118 bits (298), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 40/154 (25%), Positives = 65/154 (42%), Gaps = 23/154 (14%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56
           ++    +M+  +E A+    R  +   P VGAV V   +II    +R        AHAE+
Sbjct: 2   IEVEEKYMARCIELAKGG--RGNVSPNPMVGAVVVHKGRIIGEGFHRKCGE----AHAEV 55

Query: 57  LAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGI 110
            AI     +  + +L +  +YV+LEPC        CA  I    I R+  G  +P     
Sbjct: 56  NAI---ASVKDESLLTDSTIYVSLEPCSHYGKTPPCAELIIRKGIPRVVVGCLDPFPEVS 112

Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
             G +    A      E+  G+ E+ +R + + F
Sbjct: 113 GRGVRMLREAG----VEVVTGVMEEEARALNKAF 142


>gi|325289915|ref|YP_004266096.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase;
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Syntrophobotulus glycolicus DSM 8271]
 gi|324965316|gb|ADY56095.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase;
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Syntrophobotulus glycolicus DSM 8271]
          Length = 398

 Score =  118 bits (298), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 39/154 (25%), Positives = 64/154 (41%), Gaps = 21/154 (13%)

Query: 2   KKGNVFMSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
            +   +M  AL+ A+ A  R    P VG + V +  II    ++    K  T HAE+ A+
Sbjct: 37  DQDKFYMQRALDLAEMAEGRTSPNPMVGCLIVKDGLIIGEGYHQ----KAGTPHAEVHAL 92

Query: 60  RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113
               +          D+YVTLEPC        C  A+  A ++R++    +P       G
Sbjct: 93  TAAGK-----RASGADVYVTLEPCSHFGRTPPCCDALIQAGVKRVFVALVDPNPLVRGKG 147

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
            Q    A      E++ G+ E  + ++ + F K 
Sbjct: 148 IQKMRAAG----IEVFTGLLENEAAKLNEPFVKA 177


>gi|325508006|gb|ADZ19642.1| Riboflavin biosynthesis protein RIBD (pirimidine deaminase and
           pirimidine reductase) [Clostridium acetobutylicum EA
           2018]
          Length = 365

 Score =  118 bits (298), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 40/151 (26%), Positives = 61/151 (40%), Gaps = 21/151 (13%)

Query: 4   GNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
              FM  ALE A+     +     VGAV V +NKI+    +          HAE+ A+ M
Sbjct: 2   NEAFMKRALEIAEKGSGYVNPNPMVGAVIVKDNKIVGEGYHEKFGGN----HAEVNALNM 57

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
             +          +LYVTLEPC        CA A+  A I+R+     +P       G +
Sbjct: 58  AGK-----DAEGSELYVTLEPCSHYGKTPPCALAVVKAGIKRVIIAMEDPNPLVSTKGIK 112

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
                      E+  G+ ++ S ++ + F K
Sbjct: 113 ILKENG----IEVITGVMKKESEKLNEVFIK 139


>gi|331270609|ref|YP_004397101.1| riboflavin biosynthesis protein RibD [Clostridium botulinum
           BKT015925]
 gi|329127159|gb|AEB77104.1| riboflavin biosynthesis protein RibD [Clostridium botulinum
           BKT015925]
          Length = 372

 Score =  118 bits (298), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 38/152 (25%), Positives = 65/152 (42%), Gaps = 23/152 (15%)

Query: 4   GNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
              +M  A+  ++        P   VGAV V +NKII    ++         HAEI A++
Sbjct: 2   DLRYMKRAINLSKLGIGHT-YPNPLVGAVIVKDNKIIGEGYHQYFGEN----HAEINALK 56

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
                  +E +    +YVTLEPC        CA AI  + I+++  G  +P       G 
Sbjct: 57  NV-----KEDVNGATMYVTLEPCSHYGKTPPCANAIVKSGIKKVIIGMRDPNSLVAGRGI 111

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
           +       ++  E+  G+ E+  +++ + F K
Sbjct: 112 RILK----NNGIEVIQGVLEEEIKKVNEIFIK 139


>gi|299532967|ref|ZP_07046354.1| CMP/dCMP deaminase, zinc-binding protein [Comamonas testosteroni
           S44]
 gi|298719191|gb|EFI60161.1| CMP/dCMP deaminase, zinc-binding protein [Comamonas testosteroni
           S44]
          Length = 166

 Score =  118 bits (298), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 38/104 (36%), Positives = 56/104 (53%), Gaps = 1/104 (0%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMG 62
              ++  A+  A  A  R   P GA+ V  + ++++RA N N E  D TAHAE+ AIR+ 
Sbjct: 13  DGCYLREAIALADTARERGNRPFGALIVAADGRVLARASNANGESGDCTAHAELSAIRLA 72

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPK 106
             + S++ L    LY + EPC MCA AI  + I R+ YG    +
Sbjct: 73  SPLHSRDELAVATLYSSAEPCVMCAGAIFWSAIGRVVYGIDAER 116


>gi|302679520|ref|XP_003029442.1| hypothetical protein SCHCODRAFT_78305 [Schizophyllum commune H4-8]
 gi|300103132|gb|EFI94539.1| hypothetical protein SCHCODRAFT_78305 [Schizophyllum commune H4-8]
          Length = 158

 Score =  118 bits (298), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 41/146 (28%), Positives = 62/146 (42%), Gaps = 16/146 (10%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAV----LNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
           M  A EEA   A    IP+G+  V      + +I+   N   +    T H EI  +    
Sbjct: 13  MQRAFEEADAGAKEGGIPIGSALVQHDDSGDHLIASGRNLRIQKGSATLHGEICCLETAG 72

Query: 64  RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123
           R L   +  +  +Y TL PC MC  AI L +I R+  G +    GG E   Q        
Sbjct: 73  R-LKAGVYRKCTIYTTLSPCIMCTGAILLYKIPRVVIGENANFVGGEELLKQ-------- 123

Query: 124 HSPEIYPGISEQ-RSRQIIQDFFKER 148
           H  E+   + +  R ++++  F KE+
Sbjct: 124 HGVEVV--VLDDNRCKELMAKFIKEK 147


>gi|299532573|ref|ZP_07045963.1| CMP/dCMP deaminase, zinc-binding protein [Comamonas testosteroni
           S44]
 gi|298719520|gb|EFI60487.1| CMP/dCMP deaminase, zinc-binding protein [Comamonas testosteroni
           S44]
          Length = 164

 Score =  118 bits (298), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 33/109 (30%), Positives = 57/109 (52%), Gaps = 3/109 (2%)

Query: 2   KKGNVFMSCALEEA---QNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           +    ++  ++  A            P GAV V + K+++RA N+  +L D TAHAE+ A
Sbjct: 4   QDSEKYLLESIRLAMGNVKGRESATWPFGAVLVRDGKVLARAVNQVDDLCDPTAHAEMQA 63

Query: 59  IRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKG 107
           +R+  + L    L    +Y +  PC+MC  A+ LA ++++Y+  SN  G
Sbjct: 64  LRIAAKALGSTDLSGSVMYASGYPCSMCHTAMLLAGVKQVYFAYSNEDG 112


>gi|295692792|ref|YP_003601402.1| riboflavin biosynthesis protein ribd [Lactobacillus crispatus ST1]
 gi|295030898|emb|CBL50377.1| Riboflavin biosynthesis protein ribD [Lactobacillus crispatus ST1]
          Length = 352

 Score =  118 bits (298), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 40/153 (26%), Positives = 65/153 (42%), Gaps = 21/153 (13%)

Query: 1   MKKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           M+K   +M+ ALEEA+       + P VGAV V N ++++   + +        HAE  A
Sbjct: 1   MEKDTFYMNLALEEAKKGRYQTWKNPMVGAVIVKNGQVLATGYHHHYGQN----HAERDA 56

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
           I      L+ E L    LYVTLEPC        C+  I  + I+R+  G  +P       
Sbjct: 57  I----SKLTPEQLFNSTLYVTLEPCNHYGKQPPCSDLIIKSGIKRVVVGQIDPHKLVTGK 112

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
           G             ++  G+    + ++ + F+
Sbjct: 113 GIAQLQKNG----IQVTTGVLADDASKLNK-FY 140


>gi|330505155|ref|YP_004382024.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Pseudomonas
           mendocina NK-01]
 gi|328919441|gb|AEB60272.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Pseudomonas
           mendocina NK-01]
          Length = 371

 Score =  118 bits (298), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 38/156 (24%), Positives = 57/156 (36%), Gaps = 22/156 (14%)

Query: 1   MKKGNV-FMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57
           M + +  FM+ AL  A+           VG V V + +I+    +          HAE+ 
Sbjct: 1   MSEHDQLFMARALRLARKGLYSTHPNPRVGCVIVRDGEIVGEGWHARAGE----PHAEVH 56

Query: 58  AIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIE 111
           A+R                YVTLEPC        CA A+  A + R+     +P      
Sbjct: 57  ALRQAGDKA-----RGATAYVTLEPCSHHGRTPPCADALVAAGVSRVVAAMQDPNPQVAG 111

Query: 112 NGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
           NG     L   +   E+  G+ E  +R +   F K 
Sbjct: 112 NGL----LRLMNAGIEVRSGVLESEARALNAGFIKR 143


>gi|325110159|ref|YP_004271227.1| CMP/dCMP deaminase zinc-binding protein [Planctomyces brasiliensis
           DSM 5305]
 gi|324970427|gb|ADY61205.1| CMP/dCMP deaminase zinc-binding protein [Planctomyces brasiliensis
           DSM 5305]
          Length = 154

 Score =  118 bits (298), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 39/147 (26%), Positives = 58/147 (39%), Gaps = 12/147 (8%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNN--KIISRAGNRNRELKDVTAHAEILAIRM 61
               M  A+E A++       P GAV   +    I++   NR  E  + T H EI+AI  
Sbjct: 7   DARIMRRAIELAEHNRQ---FPFGAVITQSGSETILAEGWNRGSE--NPTWHGEIVAIND 61

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
                 Q     + LY T EPC MC +AI  A I R+ YG S P    +         + 
Sbjct: 62  FFSREQQPDTESLTLYTTAEPCPMCQSAIHWAGIDRVVYGTSIPTLISLGFQQISLRASD 121

Query: 122 C-----HHSPEIYPGISEQRSRQIIQD 143
                     E+  G+ ++   Q+ + 
Sbjct: 122 IQCRAPFQECELTGGLLKEECDQLFKQ 148


>gi|221068800|ref|ZP_03544905.1| CMP/dCMP deaminase zinc-binding [Comamonas testosteroni KF-1]
 gi|220713823|gb|EED69191.1| CMP/dCMP deaminase zinc-binding [Comamonas testosteroni KF-1]
          Length = 164

 Score =  118 bits (298), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 34/109 (31%), Positives = 57/109 (52%), Gaps = 3/109 (2%)

Query: 2   KKGNVFMSCALEEA---QNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           +    ++  ++  A            P GAV V + KI++RA N+  +L D TAHAE+ A
Sbjct: 4   QDSEKYLLESIRLAMGNVKGRESATWPFGAVLVRDGKILARAVNQVDDLCDPTAHAEMQA 63

Query: 59  IRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKG 107
           +R+  + L    L    +Y +  PC+MC  A+ LA ++++Y+  SN  G
Sbjct: 64  LRIAAKALGSTDLSGAVMYASGYPCSMCHTAMLLAGVKQVYFAYSNEDG 112


>gi|67464322|pdb|1YSD|A Chain A, Yeast Cytosine Deaminase Double Mutant
 gi|67464323|pdb|1YSD|B Chain B, Yeast Cytosine Deaminase Double Mutant
          Length = 161

 Score =  118 bits (298), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 38/150 (25%), Positives = 62/150 (41%), Gaps = 13/150 (8%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAI 59
           K     M  A EEA        +P+G   +   +  ++ R  N   +    T H EI  +
Sbjct: 12  KWDQKGMDIAYEEALLGYKEGGVPIGGCLINNKDGSVLGRGHNMRFQKGSATLHGEISTL 71

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS-NPKGGGIENGTQFYT 118
               R+   ++  +  LY TL PC MC  AI +  I R   G + N K  G +       
Sbjct: 72  ENCGRLEG-KVYKDTTLYTTLSPCDMCTGAIIMYGIPRCVVGENVNFKSKGEK------Y 124

Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKER 148
           L T  H   +   + ++R +++++ F  ER
Sbjct: 125 LQTRGHEVVV---VDDERCKKLMKQFIDER 151


>gi|315305132|ref|ZP_07875140.1| cytidine/deoxycytidylate deaminase family protein [Listeria
           ivanovii FSL F6-596]
 gi|313626498|gb|EFR95623.1| cytidine/deoxycytidylate deaminase family protein [Listeria
           ivanovii FSL F6-596]
          Length = 81

 Score =  118 bits (298), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 30/73 (41%), Positives = 45/73 (61%)

Query: 77  YVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQR 136
           YVTLEPC MC+ AI L+RI ++YYGA +PK G   +          +H+ E+  G+ E  
Sbjct: 1   YVTLEPCPMCSGAILLSRIDKVYYGAKDPKAGTAGSLMNLLQDDRFNHTCEVESGLMEAE 60

Query: 137 SRQIIQDFFKERR 149
           S ++++ FF+E R
Sbjct: 61  SSEMLKSFFQELR 73


>gi|237743881|ref|ZP_04574362.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase
           [Fusobacterium sp. 7_1]
 gi|229432912|gb|EEO43124.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase
           [Fusobacterium sp. 7_1]
          Length = 370

 Score =  118 bits (298), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 38/155 (24%), Positives = 59/155 (38%), Gaps = 25/155 (16%)

Query: 2   KKGNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57
                +M+ A+E A+       +   P VGAV V + KII    ++         HAE+ 
Sbjct: 4   NSDEKYMARAIELAKRG--TGSVNPNPLVGAVVVKDGKIIGEGWHKKYGG----PHAEVW 57

Query: 58  AIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIE 111
           A+         E      +YVTLE C        CA  I  A I+R      +P      
Sbjct: 58  ALNEAG-----ENAKGATIYVTLESCSHQGKTPPCAKRIVEAGIKRCVVACIDPNPLVAG 112

Query: 112 NGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
            G +    A      E+  G+ E+ ++ + + F K
Sbjct: 113 KGMKIIEDAG----IEVKFGVLEKEAKDVNKIFLK 143


>gi|284006397|emb|CBA71633.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase and
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Arsenophonus nasoniae]
          Length = 369

 Score =  118 bits (298), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 41/154 (26%), Positives = 58/154 (37%), Gaps = 21/154 (13%)

Query: 4   GNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
              FMS AL  A+      +  P VG V V + +++    +         AHAEI A++M
Sbjct: 5   DKQFMSRALSLAKQGRFTTSPNPNVGCVIVRDGEVVGEGFHCKTGE----AHAEIYALQM 60

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
                          YVTLEPC        CA A+  A I+R+     +P       G  
Sbjct: 61  AGEKA-----NGATAYVTLEPCSHYGKTPPCADALISAGIQRVVVAMQDPNPQVAGRGLL 115

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
               A      E+  G+    + Q+ Q F K  R
Sbjct: 116 KLQQAG----IEVIHGLLIDEAEQLNQGFLKRMR 145


>gi|284054867|ref|ZP_06385077.1| tRNA-adenosine deaminase [Arthrospira platensis str. Paraca]
          Length = 87

 Score =  118 bits (298), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 33/82 (40%), Positives = 44/82 (53%), Gaps = 1/82 (1%)

Query: 2  KKGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIR 60
             + +M  AL+    A    E+PVGA+ V    K+I++  NR     D TAHAEI+A+R
Sbjct: 6  TTHSHWMQQALKLGAAAGEAGEVPVGALIVNQQGKLIAQGENRRERDPDPTAHAEIIALR 65

Query: 61 MGCRILSQEILPEVDLYVTLEP 82
             +IL    L    LYVTLEP
Sbjct: 66 QASQILGDWHLNTCTLYVTLEP 87


>gi|330825753|ref|YP_004389056.1| CMP/dCMP deaminase zinc-binding protein [Alicycliphilus
           denitrificans K601]
 gi|329311125|gb|AEB85540.1| CMP/dCMP deaminase zinc-binding protein [Alicycliphilus
           denitrificans K601]
          Length = 163

 Score =  118 bits (297), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 26/106 (24%), Positives = 46/106 (43%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
                 +  A++ A    ++   P GAV   + + ++   N   +  D +AHAE+ A+R 
Sbjct: 9   TSDIALLRRAVDLAHANRMQGGRPFGAVIARDGRQLATGVNETHQTCDPSAHAEMQALRE 68

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKG 107
             R      L    +Y +  PC MC AA+ +A   R+++   N   
Sbjct: 69  ATRARRDASLAGCSVYASGHPCPMCLAALVMAGAERVFFAFDNRDA 114


>gi|319762326|ref|YP_004126263.1| cmp/dcmp deaminase zinc-binding protein [Alicycliphilus
           denitrificans BC]
 gi|317116887|gb|ADU99375.1| CMP/dCMP deaminase zinc-binding protein [Alicycliphilus
           denitrificans BC]
          Length = 163

 Score =  118 bits (297), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 26/106 (24%), Positives = 46/106 (43%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
                 +  A++ A    ++   P GAV   + + ++   N   +  D +AHAE+ A+R 
Sbjct: 9   TSDIALLRRAVDLAHANRMQGGRPFGAVIARDGRQLATGVNETHQTCDPSAHAEMQALRE 68

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKG 107
             R      L    +Y +  PC MC AA+ +A   R+++   N   
Sbjct: 69  ATRARRDASLAGCSVYASGHPCPMCLAALVMAGAERVFFAFDNRDA 114


>gi|264680472|ref|YP_003280382.1| CMP/dCMP deaminase, zinc-binding protein [Comamonas testosteroni
           CNB-2]
 gi|262210988|gb|ACY35086.1| CMP/dCMP deaminase, zinc-binding protein [Comamonas testosteroni
           CNB-2]
          Length = 166

 Score =  118 bits (297), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 38/106 (35%), Positives = 55/106 (51%), Gaps = 1/106 (0%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIR 60
                ++  A+  A  A  R   P GA+ V  + ++++RA N N E  D TAHAE+ AIR
Sbjct: 11  DSDGRYLREAIALADTARERGNRPFGALIVAADGRVLARASNANGESGDCTAHAELSAIR 70

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPK 106
           +   + S+  L    LY + EPC MCA AI  + I R+ YG    +
Sbjct: 71  LASPLHSRGELAVATLYSSAEPCVMCAGAIFWSAIGRVVYGIDAER 116


>gi|226950300|ref|YP_002805391.1| riboflavin biosynthesis protein RibD [Clostridium botulinum A2 str.
           Kyoto]
 gi|226842626|gb|ACO85292.1| riboflavin biosynthesis protein RibD [Clostridium botulinum A2 str.
           Kyoto]
          Length = 365

 Score =  118 bits (297), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 41/156 (26%), Positives = 63/156 (40%), Gaps = 25/156 (16%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56
           M+  N +M  AL+ A+      ++   P VGA+ V NNKII    ++        +HAE+
Sbjct: 1   MEDYNFYMEKALKLAERG--EGKVNPNPKVGAIVVKNNKIIGEGYHKYFGG----SHAEV 54

Query: 57  LAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGI 110
            A+R               +YVTLEPC        CA +I    I +      +P     
Sbjct: 55  YALREAGEKA-----KGATIYVTLEPCSHYGKTPPCAESIVKMGISKAIIAMKDPNPLVE 109

Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
             G             E+  GI E+ S+++ + F K
Sbjct: 110 GRGIDILKQNG----IEVVTGIMEKESKKLNEVFIK 141


>gi|323705867|ref|ZP_08117439.1| riboflavin biosynthesis protein RibD [Thermoanaerobacterium
           xylanolyticum LX-11]
 gi|323534863|gb|EGB24642.1| riboflavin biosynthesis protein RibD [Thermoanaerobacterium
           xylanolyticum LX-11]
          Length = 360

 Score =  118 bits (297), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 35/150 (23%), Positives = 61/150 (40%), Gaps = 21/150 (14%)

Query: 5   NVFMSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
             +M  AL+ A+         P VGAV + + +II    +          HAEI A++  
Sbjct: 2   EKYMKRALQLAKLGVGHTNPNPLVGAVIIKDGRIIGEGYHEYYGG----PHAEINALKNA 57

Query: 63  CRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116
                +E +    LYVTLEPC        C  A+  + I+ ++    +P       G + 
Sbjct: 58  -----KEDVNGATLYVTLEPCCHHGKTPPCVDAVIKSGIKNVFIAMEDPNELVAGRGIKK 112

Query: 117 YTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
              A  +    +Y G+ +  + ++ + F K
Sbjct: 113 LEEAGLN----VYTGLLKDEAEKLNEVFIK 138


>gi|34764917|ref|ZP_00145265.1| DIAMINOHYDROXYPHOSPHORIBOSYLAMINOPYRIMIDINE DEAMINASE;
           5-AMINO-6-(5-PHOSPHORIBOSYLAMINO)URACIL REDUCTASE
           [Fusobacterium nucleatum subsp. vincentii ATCC 49256]
 gi|27885744|gb|EAA23138.1| DIAMINOHYDROXYPHOSPHORIBOSYLAMINOPYRIMIDINE DEAMINASE;
           5-AMINO-6-(5-PHOSPHORIBOSYLAMINO)URACIL REDUCTASE
           [Fusobacterium nucleatum subsp. vincentii ATCC 49256]
          Length = 223

 Score =  118 bits (297), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 39/153 (25%), Positives = 60/153 (39%), Gaps = 25/153 (16%)

Query: 4   GNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
              +M+ A+E A+       +   P VGAV V + KII    ++         HAE+ A+
Sbjct: 6   DEKYMARAIELAKRG--IGGVNPNPLVGAVIVKDGKIIGEGWHKKFGG----PHAEVWAL 59

Query: 60  RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113
                    E      +YVTLEPC        CA  I  A I+R      +P       G
Sbjct: 60  NEAG-----ENAEGATIYVTLEPCSHQGKTPPCAKRIVEAGIKRCVVACIDPNPLVAGKG 114

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
            +    A      E+  G+ E+ ++ + + F K
Sbjct: 115 IKIMEDAG----IEVELGVLEKEAKDVNKIFLK 143


>gi|327440271|dbj|BAK16636.1| pyrimidine deaminase [Solibacillus silvestris StLB046]
          Length = 371

 Score =  118 bits (297), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 39/154 (25%), Positives = 63/154 (40%), Gaps = 25/154 (16%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56
           MK    +M  ALE A  A+ R      P VGAV V +  I+    +R         HAE+
Sbjct: 1   MKTDQDYMQLALELA--ASARGNTNPNPLVGAVIVKDGVIVGTGLHRKAGE----PHAEV 54

Query: 57  LAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGI 110
            A+ M       E   +  +YVTLEPC        CA  +  +  +R+     +P     
Sbjct: 55  HAVNMAG-----EHTKDATIYVTLEPCSHYGKTPPCAKLLKESGFKRVVVATEDPNPEVA 109

Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
             G +    A      E+  G+ ++ ++++ + F
Sbjct: 110 GRGIRLLRDAG----IEVEVGVLQEEAQKLNERF 139


>gi|319645199|ref|ZP_07999432.1| RibD protein [Bacillus sp. BT1B_CT2]
 gi|317393008|gb|EFV73802.1| RibD protein [Bacillus sp. BT1B_CT2]
          Length = 362

 Score =  118 bits (297), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 37/150 (24%), Positives = 63/150 (42%), Gaps = 21/150 (14%)

Query: 3   KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
               +M+ ALE A+         P VGAV V + +++    +         AHAE+ AI+
Sbjct: 2   TDAHYMNLALELARQGEGQTGANPLVGAVVVKDGEVVGMGAHLKYGE----AHAEVHAIQ 57

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           M  R           +YVTLEPC        CA  I  + ++R+   A +P       G 
Sbjct: 58  MAGRHA-----EGAVIYVTLEPCSHYGKTPPCAELIIRSGLKRVVVAAEDPNPLVSGRGI 112

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
           +    A      E+  G+ ++++ ++ + F
Sbjct: 113 EMLRSAG----IEVETGVLKEQAEELNEKF 138


>gi|52080843|ref|YP_079634.1| riboflavin-specific deaminase [Bacillus licheniformis ATCC 14580]
 gi|52786214|ref|YP_092043.1| hypothetical protein BLi02475 [Bacillus licheniformis ATCC 14580]
 gi|52004054|gb|AAU23996.1| riboflavin-specific deaminase [Bacillus licheniformis ATCC 14580]
 gi|52348716|gb|AAU41350.1| RibD [Bacillus licheniformis ATCC 14580]
          Length = 362

 Score =  118 bits (297), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 37/150 (24%), Positives = 63/150 (42%), Gaps = 21/150 (14%)

Query: 3   KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
               +M+ ALE A+         P VGAV V + +++    +         AHAE+ AI+
Sbjct: 2   TDAHYMNLALELARQGEGQTGANPLVGAVVVKDGEVVGMGAHLKYGE----AHAEVHAIQ 57

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           M  R           +YVTLEPC        CA  I  + ++R+   A +P       G 
Sbjct: 58  MAGRHA-----EGAVIYVTLEPCSHYGKTPPCAELIIRSGLKRVVVAAEDPNPLVSGRGI 112

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
           +    A      E+  G+ ++++ ++ + F
Sbjct: 113 EMLRSAG----IEVETGVLKEQAEELNEKF 138


>gi|256819357|ref|YP_003140636.1| riboflavin biosynthesis protein RibD [Capnocytophaga ochracea DSM
           7271]
 gi|256580940|gb|ACU92075.1| riboflavin biosynthesis protein RibD [Capnocytophaga ochracea DSM
           7271]
          Length = 331

 Score =  118 bits (297), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 39/150 (26%), Positives = 63/150 (42%), Gaps = 19/150 (12%)

Query: 4   GNVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
              +M   ++ A N          VG+V V   +II    ++        AHAE+ AI  
Sbjct: 9   DEWYMRRCIQLAYNGLGSTYPNPMVGSVIVYEGRIIGEGWHQKAGE----AHAEVRAITS 64

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
              +  + +LP+  +YV+LEPC        CA  I   +I R+  G ++P       G +
Sbjct: 65  ---VKDKSLLPKSTIYVSLEPCCHFGKTPPCADLIIAHKIGRVVIGTTDPFAKVHGKGIE 121

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
               A C    E+  G+ E   R++ + FF
Sbjct: 122 KLRNAGC----EVIVGVCEAECRELNKRFF 147


>gi|156973476|ref|YP_001444383.1| pyrimidine deaminase [Vibrio harveyi ATCC BAA-1116]
 gi|156525070|gb|ABU70156.1| hypothetical protein VIBHAR_01166 [Vibrio harveyi ATCC BAA-1116]
          Length = 374

 Score =  118 bits (297), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 37/153 (24%), Positives = 57/153 (37%), Gaps = 21/153 (13%)

Query: 2   KKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
            +    MS AL+ A+         P VG V V + +I+    +          HAE+ A+
Sbjct: 12  SQDFEMMSRALKLAKRGIYTTAPNPNVGCVIVRDGEIVGEGHHHRAGE----PHAEVHAM 67

Query: 60  RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113
           RM               YVTLEPC        CA  +  A++ R+     +P       G
Sbjct: 68  RMAGDKTQ-----GATAYVTLEPCSHYGRTPPCAEGLIKAKVARVVCAMEDPNPKVAGRG 122

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
            Q    A      E+  G+ E  + ++ + F K
Sbjct: 123 FQMLRDAG----VEVQVGLLESEAIELNKGFIK 151


>gi|168179301|ref|ZP_02613965.1| riboflavin biosynthesis protein RibD [Clostridium botulinum NCTC
           2916]
 gi|182669874|gb|EDT81850.1| riboflavin biosynthesis protein RibD [Clostridium botulinum NCTC
           2916]
          Length = 365

 Score =  118 bits (297), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 41/156 (26%), Positives = 62/156 (39%), Gaps = 25/156 (16%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56
           M+  N +M  AL+ A+      ++   P VGA+ V NNKII    ++         HAE+
Sbjct: 1   MEDYNFYMEKALKLAKRG--EGKVNPNPKVGAIVVKNNKIIGEGYHKYFGG----PHAEV 54

Query: 57  LAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGI 110
            A+R               +YVTLEPC        CA +I    I +      +P     
Sbjct: 55  YALREAGEKA-----KGATIYVTLEPCSHYGKTPPCAESIVKMGISKAIIAMKDPNPLVE 109

Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
             G             E+  GI E+ S+++ + F K
Sbjct: 110 GRGIDILKQNG----IEVVTGIMEKESKKLNEVFIK 141


>gi|295399034|ref|ZP_06809016.1| riboflavin biosynthesis protein RibD [Geobacillus
           thermoglucosidasius C56-YS93]
 gi|312110361|ref|YP_003988677.1| riboflavin biosynthesis protein RibD [Geobacillus sp. Y4.1MC1]
 gi|294978500|gb|EFG54096.1| riboflavin biosynthesis protein RibD [Geobacillus
           thermoglucosidasius C56-YS93]
 gi|311215462|gb|ADP74066.1| riboflavin biosynthesis protein RibD [Geobacillus sp. Y4.1MC1]
          Length = 361

 Score =  118 bits (297), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 36/153 (23%), Positives = 63/153 (41%), Gaps = 21/153 (13%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           M+    +M  A+E A+    +    P VGAV V + +I+    +          HAE+ A
Sbjct: 1   MRNDEQYMRLAIEMAKAGIGQTSPNPIVGAVVVNSGEIVGFGAHLKAGE----PHAEVHA 56

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
           IRM              +YVTLEPC        CA  +  A +RR+    ++P       
Sbjct: 57  IRMAGEKA-----KGATVYVTLEPCSHYGKTPPCADLLIDAGVRRVVIATTDPNPLVAGK 111

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
           G +       +   ++  G+ ++ + ++ + FF
Sbjct: 112 GIEKLR----NAGIDVKLGVLKEEADELNRVFF 140


>gi|15893879|ref|NP_347228.1| riboflavin biosynthesis protein RIBD (pirimidine deaminase and
           pirimidine reductase) [Clostridium acetobutylicum ATCC
           824]
 gi|15023459|gb|AAK78568.1|AE007574_6 Riboflavin biosynthesis protein RIBD (pirimidine deaminase and
           pirimidine reductase) [Clostridium acetobutylicum ATCC
           824]
          Length = 383

 Score =  118 bits (297), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 41/153 (26%), Positives = 62/153 (40%), Gaps = 21/153 (13%)

Query: 2   KKGNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
           K    FM  ALE A+     +     VGAV V +NKI+    +          HAE+ A+
Sbjct: 18  KLNEAFMKRALEIAEKGSGYVNPNPMVGAVIVKDNKIVGEGYHEKFGGN----HAEVNAL 73

Query: 60  RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113
            M  +          +LYVTLEPC        CA A+  A I+R+     +P       G
Sbjct: 74  NMAGK-----DAEGSELYVTLEPCSHYGKTPPCALAVVKAGIKRVIIAMEDPNPLVSTKG 128

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
            +           E+  G+ ++ S ++ + F K
Sbjct: 129 IKILKENG----IEVITGVMKKESEKLNEVFIK 157


>gi|256846007|ref|ZP_05551465.1| riboflavin biosynthesis protein RibD [Fusobacterium sp. 3_1_36A2]
 gi|256719566|gb|EEU33121.1| riboflavin biosynthesis protein RibD [Fusobacterium sp. 3_1_36A2]
          Length = 369

 Score =  118 bits (297), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 38/153 (24%), Positives = 59/153 (38%), Gaps = 25/153 (16%)

Query: 4   GNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
              +M+ A+E A+       +   P VGAV V + KII    ++         HAE+ A+
Sbjct: 6   DEKYMARAIELAKRG--IGGVNPNPLVGAVIVKDGKIIGEGWHKKFGG----PHAEVWAL 59

Query: 60  RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113
                    E      +YVTLEPC        CA  I    I+R      +P       G
Sbjct: 60  NEAG-----ENAEGATIYVTLEPCSHQGKTPPCAKRIVEVGIKRCVVACIDPNPLVAGKG 114

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
            +    A      E+  G+ E+ ++ + + F K
Sbjct: 115 IKIMEDAG----IEVELGVLEKEAKDVNKIFLK 143


>gi|310793981|gb|EFQ29442.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Glomerella graminicola M1.001]
          Length = 398

 Score =  118 bits (297), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 42/175 (24%), Positives = 61/175 (34%), Gaps = 57/175 (32%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI---- 59
              FM  AL+ A+ A   NE PVG V V N  +I+R  N     ++ T HAE +A+    
Sbjct: 81  HQAFMGQALDMARLALRTNETPVGCVLVYNGSVIARGMNATNVTRNGTRHAEFMAVSALL 140

Query: 60  -------RMGCRI-----------------------LSQEILPEVDLY------------ 77
                                               +  + + E  LY            
Sbjct: 141 SYRSRNNEEAADTQLRQQASERSKADVTDDESDLFPMDDDYVKEGHLYPYGQKLHRAMRV 200

Query: 78  -----------VTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
                      VT+EPC MCA  +    I+++Y+GA N K GG       +  +T
Sbjct: 201 ERSIVRECTLYVTVEPCVMCAGLLRQLGIKKVYFGAVNDKFGGTGGVFSIHKNST 255


>gi|262376969|ref|ZP_06070195.1| riboflavin biosynthesis protein RibD [Acinetobacter lwoffii SH145]
 gi|262308007|gb|EEY89144.1| riboflavin biosynthesis protein RibD [Acinetobacter lwoffii SH145]
          Length = 362

 Score =  118 bits (297), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 39/155 (25%), Positives = 58/155 (37%), Gaps = 21/155 (13%)

Query: 1   MKKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           + +  V+M  A+E A+         P VG V V +  +I    +   +      HAE+ A
Sbjct: 4   LNQDQVWMRRAIELARQGQYSTKPNPNVGCVIVKDGIVIGEGFH--PQAGQP--HAEVFA 59

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
           +R        E       YVTLEPC        CA  +  A + ++     +P       
Sbjct: 60  LRQAG-----EQARGATAYVTLEPCAHYGRTPPCAKGLVEAGVAKVVVACPDPNPLVAGK 114

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
           G Q    A      E+  GI E  + Q+ Q F K 
Sbjct: 115 GVQILKDAE----IEVEIGICEDEAHQLNQGFLKA 145


>gi|301098687|ref|XP_002898436.1| cytosine deaminase [Phytophthora infestans T30-4]
 gi|262105207|gb|EEY63259.1| cytosine deaminase [Phytophthora infestans T30-4]
          Length = 145

 Score =  118 bits (297), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 34/145 (23%), Positives = 62/145 (42%), Gaps = 12/145 (8%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           + F+  A++EA+       IP+G+V  +++KI +R  NR  +      HAE+  +    R
Sbjct: 2   DPFLQAAIDEAKLGLSEGGIPIGSVLEIDDKIAARGHNRRVQRGSAVLHAEMDCLENAGR 61

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
           + + +      LY TL PC MC+ A+ L +I  +  G +    G  E             
Sbjct: 62  LTAADY-ARATLYSTLSPCDMCSGAVLLYKIPTIVVGENKTFQGPGEYVRSRGVDVKL-- 118

Query: 125 SPEIYPGISEQR-SRQIIQDFFKER 148
                    +     +++QDF  ++
Sbjct: 119 --------LQDETCIKLMQDFIHDK 135


>gi|264677007|ref|YP_003276913.1| CMP/dCMP deaminase, zinc-binding protein [Comamonas testosteroni
           CNB-2]
 gi|262207519|gb|ACY31617.1| CMP/dCMP deaminase, zinc-binding protein [Comamonas testosteroni
           CNB-2]
          Length = 164

 Score =  118 bits (297), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 33/109 (30%), Positives = 57/109 (52%), Gaps = 3/109 (2%)

Query: 2   KKGNVFMSCALEEA---QNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           +    ++  ++  A            P GAV V + K+++RA N+  +L D TAHAE+ A
Sbjct: 4   QDSEKYLLESIRLAMGNVKGRESATWPFGAVLVRDGKVLARAVNQVDDLCDPTAHAEMQA 63

Query: 59  IRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKG 107
           +R+  + L    L    +Y +  PC+MC  A+ LA ++++Y+  SN  G
Sbjct: 64  LRIAAKALGSTDLSGAVMYASGYPCSMCHTAMLLAGVKQVYFAYSNEDG 112


>gi|11245466|gb|AAG33626.1|AF312392_1 cytosine deaminase-uracil phosphoribosyltransferase fusion protein
           [synthetic construct]
          Length = 373

 Score =  118 bits (297), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 39/150 (26%), Positives = 62/150 (41%), Gaps = 13/150 (8%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAI 59
           K     M  A EEA        +P+G   +   +  ++ R  N   +    T H EI  +
Sbjct: 9   KWDQKGMDIAYEEAALGYKEGGVPIGGCLINNKDGSVLGRGHNMRFQKGSATLHGEISTL 68

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS-NPKGGGIENGTQFYT 118
               R+   ++  +  LY TL PC MC  AI +  I R   G + N K  G +       
Sbjct: 69  ENCGRLEG-KVYKDTTLYTTLSPCDMCTGAIIMYGIPRCVVGENVNFKSKGEK------Y 121

Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKER 148
           L T  H   +   + ++R ++I++ F  ER
Sbjct: 122 LQTRGHEVVV---VDDERCKKIMKQFIDER 148


>gi|319401871|ref|NP_001187388.1| tRNA-specific adenosine deaminase-like protein 3 [Ictalurus
           punctatus]
 gi|308322883|gb|ADO28579.1| tRNA-specific adenosine deaminase-like protein 3 [Ictalurus
           punctatus]
          Length = 353

 Score =  118 bits (297), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 39/176 (22%), Positives = 68/176 (38%), Gaps = 41/176 (23%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAIR 60
           K   +M+ A+E A++        VGAV V   + +II+   +          HA ++ I 
Sbjct: 177 KIQEYMTTAVEAARSGREEGMDAVGAVIVDPKSGQIIAVGHDLT--QDHPLHHAVMVCID 234

Query: 61  M----------------GCRI--------------------LSQEILPEVDLYVTLEPCT 84
           +                 CR                     +   I    +LYVT EPC 
Sbjct: 235 LVAWAQGGGVYTYEKHPACRYTASDPQLYAGHSETSGSEENVQPYICTGYELYVTREPCV 294

Query: 85  MCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140
           MCA A+  +RI  ++YG ++P  G +    + +     +H  ++Y G+  Q   ++
Sbjct: 295 MCAMALVHSRISSVFYGTASPD-GALGTKYKIHCQKELNHHFDVYKGVMRQACEEL 349


>gi|150010266|ref|YP_001305009.1| riboflavin biosynthesis protein ribD [Parabacteroides distasonis
           ATCC 8503]
 gi|149938690|gb|ABR45387.1| riboflavin biosynthesis protein ribD [Parabacteroides distasonis
           ATCC 8503]
          Length = 359

 Score =  118 bits (297), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 40/150 (26%), Positives = 63/150 (42%), Gaps = 23/150 (15%)

Query: 5   NVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
             +M+  +E A+    R  +   P VGAV V   +II    +R        AHAE+ AI 
Sbjct: 6   EKYMARCIELAKGG--RGNVSPNPMVGAVVVHKGRIIGEGFHRKCGE----AHAEVNAI- 58

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
               +  + +L +  +YV+LEPC        CA  I    I R+  G  +P       G 
Sbjct: 59  --ASVKDESLLKDSTIYVSLEPCSHYGKTPPCAELIIRKGIPRVVVGCLDPFPEVSGRGV 116

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
           +    A      E+  G+ E+ +R + + F
Sbjct: 117 RMLREAG----VEVVTGVMEEEARALNKAF 142


>gi|298373665|ref|ZP_06983654.1| riboflavin biosynthesis protein RibD [Bacteroidetes oral taxon 274
           str. F0058]
 gi|298274717|gb|EFI16269.1| riboflavin biosynthesis protein RibD [Bacteroidetes oral taxon 274
           str. F0058]
          Length = 349

 Score =  118 bits (297), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 39/160 (24%), Positives = 62/160 (38%), Gaps = 22/160 (13%)

Query: 1   MKKGNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           M     +M   +  A+ A         VGAV V + KII    +R        AHAE+ A
Sbjct: 1   MIIDEQYMRRCITLARYADGYAAPNPMVGAVIVRDGKIIGEGYHRRYGE----AHAEVNA 56

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
           +     +L++++L    LYV LEPC        C   I  + I  +  G  +       N
Sbjct: 57  VNS---VLNKDLLRRSTLYVNLEPCSHYGKTPPCVDLIVRSGIPNVVVGMRDVNPEVCGN 113

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF---KERR 149
           G +    A       +  G+ E   R + + F    +++R
Sbjct: 114 GIRKLLEAGVG----VVEGVLEDECRFLNRRFITFMQKKR 149


>gi|206561430|ref|YP_002232195.1| putative guanine/cytidine deaminase [Burkholderia cenocepacia
           J2315]
 gi|198037472|emb|CAR53408.1| putative guanine/cytidine deaminase [Burkholderia cenocepacia
           J2315]
          Length = 159

 Score =  118 bits (297), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 34/108 (31%), Positives = 55/108 (50%), Gaps = 1/108 (0%)

Query: 1   MKKGNVFMSCALEEA-QNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
           M     ++  ++  A +N   R   P GAV V + K+++R+ N      D +AHAE+ A+
Sbjct: 5   MSHTETYLVDSIRLAMENVRERKTWPFGAVLVRDGKVLARSVNEVEATCDPSAHAEMQAV 64

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKG 107
           R   + L    L    +Y +  PC+MC +A+ LA +  +YY  SN  G
Sbjct: 65  RAASKALGSTDLSGAVMYASGYPCSMCLSAMYLAGVSEVYYAYSNEDG 112


>gi|196231665|ref|ZP_03130522.1| riboflavin biosynthesis protein RibD [Chthoniobacter flavus
           Ellin428]
 gi|196224137|gb|EDY18650.1| riboflavin biosynthesis protein RibD [Chthoniobacter flavus
           Ellin428]
          Length = 344

 Score =  118 bits (297), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 41/150 (27%), Positives = 56/150 (37%), Gaps = 19/150 (12%)

Query: 3   KGNVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +   FM  AL EA+    +      VGAV V   KII+R  +    L     HAEI A+R
Sbjct: 2   QDEEFMRAALAEARRGLGQTSPNPAVGAVIVRAGKIIARGYHHRAGL----PHAEIEALR 57

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
               +    +     +YVTLEPC        C  AI  A  RR+  G  +P       G 
Sbjct: 58  A---LPKPALARGATIYVTLEPCSTHGRTPPCVEAIIAAGFRRVVIGTIDPNPSHAGRGV 114

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
           +            +   + E   R +   F
Sbjct: 115 KLLRDTG----IAVTTDVLEAECRALNAAF 140


>gi|169342987|ref|ZP_02864015.1| riboflavin biosynthesis protein RibD [Clostridium perfringens C
           str. JGS1495]
 gi|169298896|gb|EDS80970.1| riboflavin biosynthesis protein RibD [Clostridium perfringens C
           str. JGS1495]
          Length = 365

 Score =  118 bits (297), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 38/149 (25%), Positives = 57/149 (38%), Gaps = 21/149 (14%)

Query: 4   GNVFMSCALEEAQNAAL-RNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
              FM  ALE A+      N  P VGAV V + +II +  +          HAEI AI  
Sbjct: 2   DEFFMKKALELARKGEGYVNPNPLVGAVIVKDGEIIGQGYHEFFGGN----HAEINAINS 57

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
             +           +YVTLEPC        C  AI   + +R+  G  +P         +
Sbjct: 58  SIKST-----EGATIYVTLEPCCHYGKTPPCVEAIIKNKFKRVVVGTLDPNPLVSGKSIK 112

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDF 144
               +      E+  G+ E+   ++ + F
Sbjct: 113 ILRESG----IEVKVGVLEKECIRLNEIF 137


>gi|326201832|ref|ZP_08191702.1| riboflavin biosynthesis protein RibD [Clostridium papyrosolvens DSM
           2782]
 gi|325987627|gb|EGD48453.1| riboflavin biosynthesis protein RibD [Clostridium papyrosolvens DSM
           2782]
          Length = 367

 Score =  118 bits (297), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 38/152 (25%), Positives = 61/152 (40%), Gaps = 21/152 (13%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           M     +M  A E ++    R    P VGAV V + +IIS   +         AHAE+ A
Sbjct: 1   MNIHEFYMKRAFEISKGGWGRTNPNPLVGAVIVKDGEIISEGFHEALGG----AHAEVCA 56

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
            +          +    +YV LEPC        CA AI+ + I+ +     +P       
Sbjct: 57  FQNA-----TSDISGATIYVNLEPCSHYGRTPPCAKAIAESGIKEVVVAMVDPNPKVSGK 111

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
           G Q    A  +    +  G+ E+ +R++ + F
Sbjct: 112 GIQILKDANIN----VIVGVLEEEARRLNEIF 139


>gi|282880496|ref|ZP_06289203.1| riboflavin biosynthesis protein RibD [Prevotella timonensis CRIS
           5C-B1]
 gi|281305599|gb|EFA97652.1| riboflavin biosynthesis protein RibD [Prevotella timonensis CRIS
           5C-B1]
          Length = 314

 Score =  118 bits (296), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 39/149 (26%), Positives = 61/149 (40%), Gaps = 17/149 (11%)

Query: 4   GNVFMSCALEEAQ--NAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
             ++M   L+ A+   A  +    VGAV V  ++II    +         AHAE+ A   
Sbjct: 9   DKMYMRRCLQLAKQGRALAKPNPMVGAVLVCGDRIIGEGYHIKYGE----AHAEVNAF-A 63

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
             R   + +LPE  LYV+LEPC        CA  I   R++R+  G  +        G  
Sbjct: 64  AVRQQDEHLLPESTLYVSLEPCSHYGKTPPCADLIVEKRVKRVVCGCIDVFAKVQGRGID 123

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDF 144
               A      E+  G+ E+  + + + F
Sbjct: 124 KLRKAG----IEVTVGVLEEECKLLNRQF 148


>gi|257052125|ref|YP_003129958.1| CMP/dCMP deaminase zinc-binding [Halorhabdus utahensis DSM 12940]
 gi|256690888|gb|ACV11225.1| CMP/dCMP deaminase zinc-binding [Halorhabdus utahensis DSM 12940]
          Length = 155

 Score =  118 bits (296), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 42/143 (29%), Positives = 61/143 (42%), Gaps = 10/143 (6%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
               M  A+    +        VGA+ V N  I++       E  D TAH+EI  IR  C
Sbjct: 17  NEELMRTAISLGTDPEA-----VGALLVKNGDIVASGTGAIFERPDATAHSEIEVIREAC 71

Query: 64  RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKG----GGIENGTQFYTL 119
           + L  E L    LY T EPC MC AA   ARI  + Y  ++       G I +      +
Sbjct: 72  QRLDSERLDGCWLYSTHEPCPMCTAACCWARIEGVVYALTDEDMPADWGTIFSAVSAREI 131

Query: 120 A-TCHHSPEIYPGISEQRSRQII 141
             +C H PE++ G     + +++
Sbjct: 132 RDSCEHRPELHDGFMHAEATRLL 154


>gi|126323601|ref|XP_001371730.1| PREDICTED: similar to hCG22695, [Monodelphis domestica]
          Length = 538

 Score =  118 bits (296), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 43/185 (23%), Positives = 72/185 (38%), Gaps = 45/185 (24%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRM 61
           K   +M  A+  AQ  A +    +GAV V    + +   G+  R   +   HA ++ I +
Sbjct: 354 KMQAYMEQAIWAAQQGAEKGMKSIGAVVVDPATETVLAVGHDCRSASNPLLHATMVCIDL 413

Query: 62  GCR------------------ILSQEILP-------------------------EVDLYV 78
             +                   L    L                            +LY+
Sbjct: 414 VAQGQGRGTYNFKSYPACTVSPLGNRDLSASKSIRAGTIRKLESRDDELPYICTGYELYI 473

Query: 79  TLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSR 138
           T EPC MCA A+  +RI+R++YG ++P  G +    + +T    +H  E++ GI E R  
Sbjct: 474 TSEPCVMCAMALVHSRIQRVFYGIASPD-GALGTKYKIHTRQDLNHRFEVFRGILEDRCY 532

Query: 139 QIIQD 143
            +I+D
Sbjct: 533 SLIKD 537


>gi|323484047|ref|ZP_08089417.1| hypothetical protein HMPREF9474_01166 [Clostridium symbiosum
           WAL-14163]
 gi|323402489|gb|EGA94817.1| hypothetical protein HMPREF9474_01166 [Clostridium symbiosum
           WAL-14163]
          Length = 370

 Score =  118 bits (296), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 38/157 (24%), Positives = 56/157 (35%), Gaps = 21/157 (13%)

Query: 1   MKKGNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           M     +M  AL  A+           VGAV V   ++I R  ++         HAE  A
Sbjct: 1   MLNDEKYMRMALSLARKGCGLAAPNPMVGAVIVKEGRVIGRGYHQKYGG----PHAEQNA 56

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
           +         E      +YVTLEPC        C  AI  A I R+  G+++P       
Sbjct: 57  L-----SSCTEPPQGAVMYVTLEPCCHSGKQPPCVKAILQAEISRVVVGSADPNPLVGGK 111

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
           G +        H   +   I  +   ++ + FF   R
Sbjct: 112 GIRILRE----HGVSVTEDILREECAKLNEVFFHYIR 144


>gi|188534657|ref|YP_001908454.1| Riboflavin biosynthesis protein RibD [Erwinia tasmaniensis Et1/99]
 gi|188029699|emb|CAO97578.1| Riboflavin biosynthesis protein RibD [Erwinia tasmaniensis Et1/99]
          Length = 367

 Score =  118 bits (296), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 38/155 (24%), Positives = 60/155 (38%), Gaps = 21/155 (13%)

Query: 3   KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +  V+M+ ALE A+         P VG V V +++I+    +          HAE+ A+R
Sbjct: 2   RDEVYMARALELARRGRFTTTPNPNVGCVLVRDDQIVGEGYHLRAGE----PHAEVHALR 57

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           M              +YVTLEPC        C  A+  A ++R+     +P       G 
Sbjct: 58  MAGEKS-----RGATVYVTLEPCSHHGRTPPCCDALIAAGVKRVVTAMQDPNPQVAGRGL 112

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
                A      E+  G+  Q +  + + F K  R
Sbjct: 113 YRLQQAG----IEVSHGLMMQEAEALNRGFLKRMR 143


>gi|183601038|ref|ZP_02962531.1| hypothetical protein PROSTU_04659 [Providencia stuartii ATCC 25827]
 gi|188019376|gb|EDU57416.1| hypothetical protein PROSTU_04659 [Providencia stuartii ATCC 25827]
          Length = 371

 Score =  118 bits (296), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 39/157 (24%), Positives = 63/157 (40%), Gaps = 21/157 (13%)

Query: 1   MKKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           +++  ++M+ ALE AQ      +  P VG V V + +I+    ++         HAE+ A
Sbjct: 2   IEQDRIYMARALELAQKGRFTTSPNPNVGCVIVRDGEIVGEGYHQKAGE----PHAEVHA 57

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
           +RM               YVTLEPC        CA A+  A +RR+     +P       
Sbjct: 58  LRMAGEKA-----KGATAYVTLEPCSHHGRTPPCAEALINAGVRRVVAAMQDPNPQVAGR 112

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
           G    + A      E   G+  + +  + + F K  R
Sbjct: 113 GLYMLSQAG----IETASGVLMEEAESLNRGFLKRMR 145


>gi|153940820|ref|YP_001392147.1| riboflavin biosynthesis protein RibD [Clostridium botulinum F str.
           Langeland]
 gi|152936716|gb|ABS42214.1| riboflavin biosynthesis protein RibD [Clostridium botulinum F str.
           Langeland]
 gi|295320152|gb|ADG00530.1| riboflavin biosynthesis protein RibD [Clostridium botulinum F str.
           230613]
          Length = 365

 Score =  118 bits (296), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 41/156 (26%), Positives = 62/156 (39%), Gaps = 25/156 (16%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56
           M+  N +M  AL+ A+      ++   P VGA+ V NNKII    ++         HAE+
Sbjct: 1   MEDYNFYMEKALKLAERG--EGKVNPNPKVGAIVVKNNKIIGEGYHKYFGG----PHAEV 54

Query: 57  LAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGI 110
            A+R               +YVTLEPC        CA +I    I +      +P     
Sbjct: 55  YALREAGEKA-----KGATIYVTLEPCSHYGKTPPCAESIVKMGISKAIIAMKDPNPLVE 109

Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
             G             E+  GI E+ S+++ + F K
Sbjct: 110 GRGIDILKQNG----IEVVTGIMEKESKKLNEVFIK 141


>gi|298209105|ref|YP_003717284.1| riboflavin biosynthesis protein RibD [Croceibacter atlanticus
           HTCC2559]
 gi|83849032|gb|EAP86901.1| riboflavin biosynthesis protein RibD [Croceibacter atlanticus
           HTCC2559]
          Length = 333

 Score =  118 bits (296), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 39/153 (25%), Positives = 63/153 (41%), Gaps = 19/153 (12%)

Query: 1   MKKGNVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           M     ++   L+ A+           VG+V V +NKII    ++   L    AHAE+ A
Sbjct: 1   MNSHKTYIKRCLQLAKKGLGTTYPNPMVGSVIVYDNKIIGEGWHQIAGL----AHAEVNA 56

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
           I     +  + +L +  +YV+LEPC        CA  I    I  +  G  +P       
Sbjct: 57  INA---VKDKSLLKKSTIYVSLEPCSHYGKTPPCADLIIANNIPNVVIGTVDPFAKVKGQ 113

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
           G +    A C    +I  G+ E   +++ + FF
Sbjct: 114 GIKKLLDAGC----KITVGVLEDECQELNKRFF 142


>gi|256027507|ref|ZP_05441341.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Fusobacterium
           sp. D11]
 gi|289765470|ref|ZP_06524848.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase
           [Fusobacterium sp. D11]
 gi|289717025|gb|EFD81037.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase
           [Fusobacterium sp. D11]
          Length = 370

 Score =  118 bits (296), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 39/155 (25%), Positives = 60/155 (38%), Gaps = 25/155 (16%)

Query: 2   KKGNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57
                +M+ A+E A+       +   P VGAV V + KII    ++         HAE+ 
Sbjct: 4   NSDEKYMARAIELAKRG--TGSVNPNPLVGAVVVKDGKIIGEGWHKKYGG----PHAEVW 57

Query: 58  AIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIE 111
           A+         E      +YVTLEPC        CA  I  A I++      +P      
Sbjct: 58  ALNEAG-----ENAKGATIYVTLEPCSHQGKTPPCAKRIIEAGIKKCVVACIDPNPLVAG 112

Query: 112 NGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
            G +    A      E+  GI E+ ++ + + F K
Sbjct: 113 KGIKIIEDAG----IEVKLGILEKEAKDVNKIFLK 143


>gi|239816940|ref|YP_002945850.1| CMP/dCMP deaminase zinc-binding [Variovorax paradoxus S110]
 gi|239803517|gb|ACS20584.1| CMP/dCMP deaminase zinc-binding [Variovorax paradoxus S110]
          Length = 176

 Score =  118 bits (296), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 39/149 (26%), Positives = 61/149 (40%), Gaps = 11/149 (7%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIR 60
           ++   ++  A+  +  A  R   P G+V V    ++++ A N N E  D TAHAE+ A+R
Sbjct: 20  ERDGRYLRKAIVWSHAARRRGNRPFGSVIVSAAGEVLAEAANSNTESGDCTAHAEMNALR 79

Query: 61  M-GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
               R L++E L    +Y + EPC MCA AI  + I R+ +G    +        Q    
Sbjct: 80  ALAGRGLTREELAGATIYASGEPCVMCAGAIFWSNIGRVVFGIDAERLRVFRGERQDQRD 139

Query: 120 ATC---------HHSPEIYPGISEQRSRQ 139
           A            H  E         +  
Sbjct: 140 AELSCRDVFRASPHPIECIGPALLDEASA 168


>gi|170751807|ref|YP_001758067.1| CMP/dCMP deaminase zinc-binding [Methylobacterium radiotolerans JCM
           2831]
 gi|170658329|gb|ACB27384.1| CMP/dCMP deaminase zinc-binding [Methylobacterium radiotolerans JCM
           2831]
          Length = 152

 Score =  118 bits (296), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 32/107 (29%), Positives = 50/107 (46%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           M      +  A+  A         P GAV V +  ++ RA N      D +AHAE++A+R
Sbjct: 1   MSTHEDHIREAVALAAANVEAGGAPYGAVIVRDGAVLVRAANTVHATNDPSAHAEMVALR 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKG 107
              R+L +  L +  +Y +  PC MC AA+ LA  +  Y+  S  + 
Sbjct: 61  EASRLLGRRDLGDCVMYASGRPCPMCHAAMRLAGFKEGYFAFSAEEA 107


>gi|34810531|pdb|1P6O|A Chain A, The Crystal Structure Of Yeast Cytosine Deaminase Bound To
           4(R)-Hydroxyl-3,4-Dihydropyrimidine At 1.14 Angstroms.
 gi|34810532|pdb|1P6O|B Chain B, The Crystal Structure Of Yeast Cytosine Deaminase Bound To
           4(R)-Hydroxyl-3,4-Dihydropyrimidine At 1.14 Angstroms.
 gi|46015452|pdb|1RB7|A Chain A, Yeast Cytosine Deaminase Crystal Form P212121 With Sodium
           Acetate.
 gi|46015453|pdb|1RB7|B Chain B, Yeast Cytosine Deaminase Crystal Form P212121 With Sodium
           Acetate
          Length = 161

 Score =  118 bits (296), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 39/150 (26%), Positives = 62/150 (41%), Gaps = 13/150 (8%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAI 59
           K     M  A EEA        +P+G   +   +  ++ R  N   +    T H EI  +
Sbjct: 12  KWDQKGMDIAYEEAALGYKEGGVPIGGCLINNKDGSVLGRGHNMRFQKGSATLHGEISTL 71

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS-NPKGGGIENGTQFYT 118
               R+   ++  +  LY TL PC MC  AI +  I R   G + N K  G +       
Sbjct: 72  ENCGRLEG-KVYKDTTLYTTLSPCDMCTGAIIMYGIPRCVVGENVNFKSKGEK------Y 124

Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKER 148
           L T  H   +   + ++R ++I++ F  ER
Sbjct: 125 LQTRGHEVVV---VDDERCKKIMKQFIDER 151


>gi|225555098|gb|EEH03391.1| tRNA specific adenosine deaminase [Ajellomyces capsulatus G186AR]
          Length = 234

 Score =  118 bits (296), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 36/146 (24%), Positives = 58/146 (39%), Gaps = 35/146 (23%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           +K   FM  AL+                                     T HAE LAI  
Sbjct: 87  QKHEYFMEKALDM-----------------------------------GTRHAEFLAIEE 111

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
             R   + I  E DLYVT+EPC MCA+A+   +IR +Y+G +N + GG       ++   
Sbjct: 112 VLRNYPRSIFRETDLYVTVEPCIMCASALRQYQIRHVYFGCANERFGGTGGVLNLHSDPG 171

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKE 147
                 +  G+  + +  +++ F+ +
Sbjct: 172 IDPPYGLTGGLFRREAIMLLRRFYIQ 197


>gi|258515514|ref|YP_003191736.1| riboflavin biosynthesis protein RibD [Desulfotomaculum acetoxidans
           DSM 771]
 gi|257779219|gb|ACV63113.1| riboflavin biosynthesis protein RibD [Desulfotomaculum acetoxidans
           DSM 771]
          Length = 367

 Score =  118 bits (296), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 40/151 (26%), Positives = 59/151 (39%), Gaps = 21/151 (13%)

Query: 4   GNVFMSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
              +M  AL+ A  A  R    P VG+V V N  ++ R  +     K  T HAEI A++ 
Sbjct: 2   DEQYMKMALDLAARARGRTSPNPMVGSVIVKNGAVVGRGYH----KKAGTPHAEIHALKE 57

Query: 62  GCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQ 115
                         +YVTLEPC        C  AI  A I+R     ++P       G  
Sbjct: 58  AGEAA-----RGATIYVTLEPCCHHGRTGPCTEAILSAGIKRAVVAMTDPNPLVAGKGLD 112

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
               A      E+  G+  + + ++ + F K
Sbjct: 113 ILRKAG----VEVVSGLLAEEAAKLNEVFIK 139


>gi|239827589|ref|YP_002950213.1| riboflavin biosynthesis protein RibD [Geobacillus sp. WCH70]
 gi|239807882|gb|ACS24947.1| riboflavin biosynthesis protein RibD [Geobacillus sp. WCH70]
          Length = 361

 Score =  118 bits (296), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 35/154 (22%), Positives = 63/154 (40%), Gaps = 23/154 (14%)

Query: 1   MKKGNVFMSCALEEAQNAALR---NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57
           M+    +M  A+E A+    +   N + VGAV V + +I+    +          HAE+ 
Sbjct: 1   MRNDEQYMRLAIEIAKAGIGQTSPNPV-VGAVVVKDGEIVGFGAHLKAGEL----HAEVH 55

Query: 58  AIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIE 111
           AIRM              +YVTLEPC        CA  +    ++R+    ++P      
Sbjct: 56  AIRMAGEKA-----KGSTVYVTLEPCSHYGKTPPCADLLVETGVQRVVIATTDPNPLVAG 110

Query: 112 NGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
            G +    A      ++  G+ ++ + ++ + FF
Sbjct: 111 KGIEKLRSAG----IDVKLGVLKEEADELNRVFF 140


>gi|88801234|ref|ZP_01116773.1| riboflavin biosynthesis protein [Reinekea sp. MED297]
 gi|88776020|gb|EAR07256.1| riboflavin biosynthesis protein [Reinekea sp. MED297]
          Length = 366

 Score =  118 bits (296), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 35/158 (22%), Positives = 59/158 (37%), Gaps = 23/158 (14%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57
           M   + +M+ AL+ A         P   VG V V + +++    +R    K  T HAE+ 
Sbjct: 5   MTSHDAWMAQALKLAARGRRTT-TPNPNVGCVIVRDGELVGSGYHR----KAGTPHAEVH 59

Query: 58  AIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIE 111
           A+                 YVTLEPC        CA A+  A +  +    ++P      
Sbjct: 60  ALAEAGSKA-----RGATAYVTLEPCSHYGKTPPCADALIKAGVANVVCAMTDPNPQVAG 114

Query: 112 NGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
            G +       +   E+  G+    + ++ + F K  R
Sbjct: 115 QGLEKLR----NAGIEVISGVLNAEAERLNRGFLKRMR 148


>gi|148508325|gb|ABQ76108.1| cytosine/adenosine deaminases [uncultured haloarchaeon]
          Length = 153

 Score =  118 bits (296), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 35/144 (24%), Positives = 63/144 (43%), Gaps = 1/144 (0%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           +     M+ A+E A+ AA R + P G+V V ++ I+ R  NR     D+  H E+     
Sbjct: 8   RSHEAHMTEAIELAREAADRGDDPFGSVLVRDDTIVMRESNREHTESDIRRHPELHLAYR 67

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGA-SNPKGGGIENGTQFYTLA 120
            C+  S +    + +Y + EPC MCA  ++ A    + Y   ++     I + +      
Sbjct: 68  ACQAYSPQERAMMAMYTSTEPCPMCAGGMTTAHFGSVIYSVGTDELAQFIGSQSPVRAED 127

Query: 121 TCHHSPEIYPGISEQRSRQIIQDF 144
                 E++  +     R+I Q+F
Sbjct: 128 ILSGVTEVHGPVLNDDGRRIHQEF 151


>gi|291616522|ref|YP_003519264.1| RibD [Pantoea ananatis LMG 20103]
 gi|291151552|gb|ADD76136.1| RibD [Pantoea ananatis LMG 20103]
          Length = 367

 Score =  118 bits (296), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 37/155 (23%), Positives = 57/155 (36%), Gaps = 21/155 (13%)

Query: 3   KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
               +M+ ALE A+         P VG V V + +I+    ++         HAE+ A+R
Sbjct: 2   TDERYMARALELARRGRFTTTPNPNVGCVIVRDGQIVGEGWHQRAGE----PHAEVHALR 57

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           M       +       YVTLEPC        C  A+  A + R+     +P       G 
Sbjct: 58  MAG-----DRARGATAYVTLEPCSHHGRTPPCCDALIAAGVTRVVAAMQDPNPQVAGRGL 112

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
                A      E+  G+  Q +  + + F K  R
Sbjct: 113 HRLHQAG----IEVSHGLMMQEAEALNRGFLKRMR 143


>gi|327392953|dbj|BAK10375.1| riboflavin biosynthesis protein ribD [Pantoea ananatis AJ13355]
          Length = 367

 Score =  118 bits (296), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 37/155 (23%), Positives = 57/155 (36%), Gaps = 21/155 (13%)

Query: 3   KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
               +M+ ALE A+         P VG V V + +I+    ++         HAE+ A+R
Sbjct: 2   TDERYMARALELARRGRFTTTPNPNVGCVIVRDGQIVGEGWHQRAGE----PHAEVHALR 57

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           M       +       YVTLEPC        C  A+  A + R+     +P       G 
Sbjct: 58  MAG-----DRARGATAYVTLEPCSHHGRTPPCCDALIAAGVTRVVAAMQDPNPQVAGRGL 112

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
                A      E+  G+  Q +  + + F K  R
Sbjct: 113 HRLHQAG----IEVSHGLMMQEAEALNRGFLKRMR 143


>gi|115955248|ref|XP_001190079.1| PREDICTED: similar to DEADC1 protein [Strongylocentrotus
           purpuratus]
          Length = 108

 Score =  118 bits (296), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 35/97 (36%), Positives = 50/97 (51%), Gaps = 6/97 (6%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
              +M  A+  A+ A  R E+PVG + V  ++II   GN   E K+ T HAEILA+    
Sbjct: 9   DEKWMKEAVNMAKQALGRGEVPVGCLLVYEDQIIGTGGNAANETKNATRHAEILALEEAM 68

Query: 64  RILSQEIL------PEVDLYVTLEPCTMCAAAISLAR 94
           R    + L       +  L+VT+EPC MCA A+ +  
Sbjct: 69  RWCDDKQLERGELFSQTKLFVTVEPCIMCAGALRIMG 105


>gi|114794616|pdb|2HXV|A Chain A, Crystal Structure Of A
           Diaminohydroxyphosphoribosylaminopyrimidine Deaminase
           5-Amino-6-(5-Phosphoribosylamino)uracil Reductase
           (Tm1828) From Thermotoga Maritima At 1.80 A Resolution
          Length = 360

 Score =  118 bits (296), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 40/149 (26%), Positives = 61/149 (40%), Gaps = 20/149 (13%)

Query: 5   NVFMSCALEEAQNAALR--NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
             F   A+E A+    R     PVGAV V + +II+   +          HAE  AI   
Sbjct: 15  ETFXKRAIELAKKGLGRVNPNPPVGAVVVKDGRIIAEGFHPYFGG----PHAERXAIESA 70

Query: 63  CRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116
            +    E L    L VTLEPC        C   I  + I+ +  G  +P      NG + 
Sbjct: 71  RKK--GEDLRGATLIVTLEPCDHHGKTPPCTDLIIESGIKTVVIGTRDPNP-VSGNGVEK 127

Query: 117 YTLATCHHSPEIYPGISEQRSRQIIQDFF 145
           +     +H  E+  G+ E+  +++  +FF
Sbjct: 128 FR----NHGIEVIEGVLEEEVKKLC-EFF 151


>gi|257468833|ref|ZP_05632927.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Fusobacterium
           ulcerans ATCC 49185]
 gi|317063083|ref|ZP_07927568.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase
           [Fusobacterium ulcerans ATCC 49185]
 gi|313688759|gb|EFS25594.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase
           [Fusobacterium ulcerans ATCC 49185]
          Length = 358

 Score =  117 bits (295), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 41/153 (26%), Positives = 59/153 (38%), Gaps = 25/153 (16%)

Query: 4   GNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
              +M  ALE A  A     +   P VGAV V + KI+    +R         HAE+ A+
Sbjct: 2   DKKYMERALELA--ALGEGNVNPNPMVGAVVVKDGKILGEGYHRKYGG----PHAEVFAL 55

Query: 60  RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113
                           +YVTLEPC        CA  I    I+R    + +P       G
Sbjct: 56  EEAGEKA-----KGATIYVTLEPCSHYGKTPPCAKKIIDMGIKRCVIASLDPNPLVSGRG 110

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
            +  T A      E+  GI E+ + ++ + F K
Sbjct: 111 IKMMTDAG----IEVITGIMEKEALELNRVFMK 139


>gi|150016108|ref|YP_001308362.1| riboflavin biosynthesis protein RibD [Clostridium beijerinckii
           NCIMB 8052]
 gi|149902573|gb|ABR33406.1| riboflavin biosynthesis protein RibD [Clostridium beijerinckii
           NCIMB 8052]
          Length = 361

 Score =  117 bits (295), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 42/151 (27%), Positives = 64/151 (42%), Gaps = 21/151 (13%)

Query: 4   GNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
              +M  ALE A+      N  P VGAV V +N+II    +         AHAE  A++ 
Sbjct: 2   DEKYMEIALELAKRGIGKVNPNPLVGAVIVKDNEIIGEGYHECYGE----AHAERNAVKN 57

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
                  + + E  +YVTLEPC        C   I   + +R+  G  +P    + +G  
Sbjct: 58  A-----TKSVEESTIYVTLEPCAHYGKTPPCVDLIIEKKFKRVVIGMLDPNE--LVSGKS 110

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
              L    H  E+  GI E+  +++ + F K
Sbjct: 111 VEKLKQ--HGIEVVVGIKEKECKELNEIFIK 139


>gi|168214536|ref|ZP_02640161.1| riboflavin biosynthesis protein RibD [Clostridium perfringens CPE
           str. F4969]
 gi|170714018|gb|EDT26200.1| riboflavin biosynthesis protein RibD [Clostridium perfringens CPE
           str. F4969]
          Length = 366

 Score =  117 bits (295), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 40/149 (26%), Positives = 59/149 (39%), Gaps = 21/149 (14%)

Query: 4   GNVFMSCALEEAQNAAL-RNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
              FM  ALE A+      N  P VGAV V   +II +  +          HAEI AI  
Sbjct: 2   DEFFMKKALELARKGEGYVNPNPLVGAVIVKGGEIIGQGYHEFFGGN----HAEINAINS 57

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
                S + +    +YVTLEPC        C  AI   + +R+  G  +P       G +
Sbjct: 58  -----SIKSIEGATIYVTLEPCCHYGKTPPCVEAIIKNKFKRVVVGTLDPNPLVSGKGIR 112

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDF 144
               +      E+  G+ E+   ++ + F
Sbjct: 113 ILRESG----IEVNVGVLEKECIRLNEIF 137


>gi|8039802|sp|P50853|RIBD_ACTPL RecName: Full=Riboflavin biosynthesis protein RibD; Includes:
           RecName:
           Full=Diaminohydroxyphosphoribosylaminopyrimidine
           deaminase; Short=DRAP deaminase; AltName:
           Full=Riboflavin-specific deaminase; Includes: RecName:
           Full=5-amino-6-(5-phosphoribosylamino)uracil reductase;
           AltName: Full=HTP reductase
          Length = 376

 Score =  117 bits (295), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 35/151 (23%), Positives = 58/151 (38%), Gaps = 21/151 (13%)

Query: 3   KGNVFMSCALEEAQNAAL-RNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
               +M  A+  A+      N  P VG V V N +I++   +          HAE  A+ 
Sbjct: 14  TDLDYMRRAIALAKQGLGWTNPNPLVGCVIVKNGEIVAEGYHEKIGG----WHAERNAV- 68

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
               +  +E L     YVTLEPC        C+  +    I++++ G+S+P       G 
Sbjct: 69  ----LHCKEDLSGATAYVTLEPCCHHGRTPPCSDLLIERGIKKVFIGSSDPNPLVAGRGA 124

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
                A      E+  G+ ++    +   FF
Sbjct: 125 NQLRQAG----VEVVEGLLKEECDALNPIFF 151


>gi|126207866|ref|YP_001053091.1| riboflavin biosynthesis protein [Actinobacillus pleuropneumoniae
           L20]
 gi|1173516|gb|AAA86522.1| riboflavin-specific deaminase [Actinobacillus pleuropneumoniae]
 gi|126096658|gb|ABN73486.1| riboflavin biosynthesis protein [Actinobacillus pleuropneumoniae
           serovar 5b str. L20]
          Length = 410

 Score =  117 bits (295), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 35/151 (23%), Positives = 58/151 (38%), Gaps = 21/151 (13%)

Query: 3   KGNVFMSCALEEAQNAAL-RNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
               +M  A+  A+      N  P VG V V N +I++   +          HAE  A+ 
Sbjct: 48  TDLDYMRRAIALAKQGLGWTNPNPLVGCVIVKNGEIVAEGYHEKIGG----WHAERNAV- 102

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
               +  +E L     YVTLEPC        C+  +    I++++ G+S+P       G 
Sbjct: 103 ----LHCKEDLSGATAYVTLEPCCHHGRTPPCSDLLIERGIKKVFIGSSDPNPLVAGRGA 158

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
                A      E+  G+ ++    +   FF
Sbjct: 159 NQLRQAG----VEVVEGLLKEECDALNPIFF 185


>gi|303252625|ref|ZP_07338788.1| riboflavin biosynthesis protein [Actinobacillus pleuropneumoniae
           serovar 2 str. 4226]
 gi|302648593|gb|EFL78786.1| riboflavin biosynthesis protein [Actinobacillus pleuropneumoniae
           serovar 2 str. 4226]
          Length = 379

 Score =  117 bits (295), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 35/151 (23%), Positives = 58/151 (38%), Gaps = 21/151 (13%)

Query: 3   KGNVFMSCALEEAQNAAL-RNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
               +M  A+  A+      N  P VG V V N +I++   +          HAE  A+ 
Sbjct: 17  TDLDYMRRAIALAKQGLGWTNPNPLVGCVIVKNGEIVAEGYHEKIGG----WHAERNAV- 71

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
               +  +E L     YVTLEPC        C+  +    I++++ G+S+P       G 
Sbjct: 72  ----LHCKEDLSGATAYVTLEPCCHHGRTPPCSDLLIERGIKKVFIGSSDPNPLVAGRGA 127

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
                A      E+  G+ ++    +   FF
Sbjct: 128 NQLRQAG----VEVVEGLLKEECDALNPIFF 154


>gi|32455816|ref|NP_862468.1| hypothetical protein pADP-1_p031 [Pseudomonas sp. ADP]
 gi|13937453|gb|AAK50264.1|U66917_31 hypothetical protein [Pseudomonas sp. ADP]
 gi|12644709|gb|AAK00500.1| cytosine deaminase-like protein [Acidovorax citrulli]
          Length = 158

 Score =  117 bits (295), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 34/142 (23%), Positives = 60/142 (42%), Gaps = 10/142 (7%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           +  A+EEA+ + L   +P+G+V V   K++SR  N   +      HAE+ A+    R   
Sbjct: 11  LQIAIEEAEASFLEGGLPIGSVLVHRGKLVSRGRNLRAQTGSTLHHAEMTALANAGRQPP 70

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
           +    E  LY TL PC MC  A+ L  I ++  G    +  G +   +           E
Sbjct: 71  EFY-RETVLYTTLSPCPMCTGAMILYGIPKVVIGTPTVREWGEDRLREL--------GVE 121

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
           +      +   +++     ++R
Sbjct: 122 VV-HTRSEACAELLSRMITQQR 142


>gi|206969393|ref|ZP_03230348.1| riboflavin biosynthesis protein RibD [Bacillus cereus AH1134]
 gi|206736434|gb|EDZ53592.1| riboflavin biosynthesis protein RibD [Bacillus cereus AH1134]
          Length = 367

 Score =  117 bits (295), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 44/153 (28%), Positives = 66/153 (43%), Gaps = 23/153 (15%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57
           M +  ++M  ALE A  A      P   VG+V V +N+I+    +          HAEI 
Sbjct: 1   MLEHELYMKLALENA-KAMKGQTTPNPLVGSVIVNDNRIVGVGAHMKAGE----PHAEIH 55

Query: 58  AIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIE 111
           AIRM       E      +YVTLEPC+       CA AI  A I+++     +P      
Sbjct: 56  AIRMAG-----EQARGGTIYVTLEPCSHHGRTGPCAGAIVQAGIKKVVVATLDPNPLVSG 110

Query: 112 NGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
            G +    A      E+  G+ E+ S+++ + F
Sbjct: 111 RGIKILQDAG----IEVLVGVCEEESKKMNEVF 139


>gi|301308353|ref|ZP_07214307.1| riboflavin biosynthesis protein RibD [Bacteroides sp. 20_3]
 gi|300833823|gb|EFK64439.1| riboflavin biosynthesis protein RibD [Bacteroides sp. 20_3]
          Length = 359

 Score =  117 bits (295), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 40/150 (26%), Positives = 63/150 (42%), Gaps = 23/150 (15%)

Query: 5   NVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
             +M+  +E A+    R  +   P VGAV V   +II    +R        AHAE+ AI 
Sbjct: 6   EKYMARCIELAKGG--RGNVSPNPMVGAVVVHKGRIIGEGFHRKCGE----AHAEVNAI- 58

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
               +  + +L +  +YV+LEPC        CA  I    I R+  G  +P       G 
Sbjct: 59  --ASVKDESLLKDSTIYVSLEPCSHYGKTPPCAELIIRKGIPRVVVGCLDPFPEVSGRGV 116

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
           +    A      E+  G+ E+ +R + + F
Sbjct: 117 RMLREAG----VEVVTGVMEEEARALNKAF 142


>gi|255012465|ref|ZP_05284591.1| riboflavin biosynthesis protein ribD [Bacteroides sp. 2_1_7]
          Length = 359

 Score =  117 bits (295), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 40/150 (26%), Positives = 63/150 (42%), Gaps = 23/150 (15%)

Query: 5   NVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
             +M+  +E A+    R  +   P VGAV V   +II    +R        AHAE+ AI 
Sbjct: 6   EKYMARCIELAKGG--RGNVSPNPMVGAVVVHKGRIIGEGFHRKCGE----AHAEVNAI- 58

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
               +  + +L +  +YV+LEPC        CA  I    I R+  G  +P       G 
Sbjct: 59  --ASVKDESLLKDSTIYVSLEPCSHYGKTPPCAELIIRKGIPRVVVGCLDPFPEVSGRGV 116

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
           +    A      E+  G+ E+ +R + + F
Sbjct: 117 RMLREAG----VEVVTGVMEEEARALNKAF 142


>gi|227358137|ref|ZP_03842478.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase and
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Proteus mirabilis ATCC 29906]
 gi|227161473|gb|EEI46510.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase and
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Proteus mirabilis ATCC 29906]
          Length = 385

 Score =  117 bits (295), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 39/155 (25%), Positives = 58/155 (37%), Gaps = 21/155 (13%)

Query: 3   KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
               +M  A+E A       +  P VG V V   KII    + +        HAE+ A+ 
Sbjct: 17  NDETYMRRAIELAALGRFTTSPNPNVGCVIVKEGKIIGEGYHHHAGG----PHAEVNALN 72

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           M       E      +YVTLEPC        CA A+  A ++R+     +P       G 
Sbjct: 73  MAG-----ENAKGATVYVTLEPCSHFGKTPPCADALINAGVKRVVAAMQDPNPQVAGRGL 127

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
                A      ++  G+  Q + ++   FFK  R
Sbjct: 128 HKLVAAG----IDVSHGVLMQEAEKLNIGFFKRMR 158


>gi|312141603|ref|YP_004008939.1| cmp/dcmp deaminase [Rhodococcus equi 103S]
 gi|311890942|emb|CBH50261.1| CMP/dCMP deaminase [Rhodococcus equi 103S]
          Length = 156

 Score =  117 bits (295), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 28/94 (29%), Positives = 44/94 (46%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           F+   ++ A+        P  AV V + ++++ + NR  +  D TAHAEILAI   C  L
Sbjct: 3   FVQRTIDLARQNVTEGGRPFAAVIVKDGEVLAESPNRVAQTGDPTAHAEILAISQACTEL 62

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
             E L    +YV   PC MC  ++       + +
Sbjct: 63  GTEHLTGTTIYVLAHPCPMCLGSLYYCSPDEVVF 96


>gi|167464708|ref|ZP_02329797.1| riboflavin specific deaminase [Paenibacillus larvae subsp. larvae
           BRL-230010]
          Length = 341

 Score =  117 bits (295), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 34/150 (22%), Positives = 61/150 (40%), Gaps = 21/150 (14%)

Query: 3   KGNVFMSCALEEAQNAALRNEI-PV-GAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +  ++M  AL+ A+ A  +  + PV G V V + +II    + +R       HAE+ A++
Sbjct: 5   QDEMYMRLALDMAKGAKGQTGVNPVVGCVLVKDGRIIGMGAHLHRGQG----HAEVHALQ 60

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           M               YVTLEPC        C+  +    ++R+   A +P       G 
Sbjct: 61  MAGAEA-----EGSTAYVTLEPCSHFGKTPPCSGRLIDHGVKRVVIAAVDPNPQVAGAGI 115

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
           +    A      E+  G+  + +  + + F
Sbjct: 116 ERLRSAG----IEVDVGLLAEEASAMNEAF 141


>gi|78063661|ref|YP_373569.1| cytidine/deoxycytidylate deaminase [Burkholderia sp. 383]
 gi|77971546|gb|ABB12925.1| Cytidine/deoxycytidylate deaminase [Burkholderia sp. 383]
          Length = 155

 Score =  117 bits (295), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 29/94 (30%), Positives = 47/94 (50%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           F+   ++ A         P   V V + +I++ + N   +  D TAHAEILA+R  CR L
Sbjct: 3   FVKRTIDLAMKNVEEGGRPFATVIVRDGEIVAESPNLVAQTSDPTAHAEILAVRDACRKL 62

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
             E L + ++Y+   PC MC  ++     +R+ Y
Sbjct: 63  GTEHLTDCEIYILASPCPMCLGSLYYCSPKRVVY 96


>gi|255715725|ref|XP_002554144.1| KLTH0E15290p [Lachancea thermotolerans]
 gi|238935526|emb|CAR23707.1| KLTH0E15290p [Lachancea thermotolerans]
          Length = 152

 Score =  117 bits (295), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 32/143 (22%), Positives = 54/143 (37%), Gaps = 11/143 (7%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M  A +EA        +P+G   +   +  ++    N   +    T H EI  +    R+
Sbjct: 9   MEIAYKEAAKGMEEGGVPIGGCLIDNRDGTVVGSGHNMRFQKGSATLHGEISTLENCGRM 68

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
               +     LY TL PC MC  AI L  I R   G          +G ++     C   
Sbjct: 69  KGS-VYKNCTLYTTLSPCDMCTGAILLYGIPRCVVG---ENVNFKGDGERYLAERGCEVR 124

Query: 126 PEIYPGISEQRSRQIIQDFFKER 148
                 + +++ ++I++ F  ER
Sbjct: 125 V-----VDDEKCKKIMKQFIDER 142


>gi|256839100|ref|ZP_05544610.1| riboflavin biosynthesis protein RibD [Parabacteroides sp. D13]
 gi|256740019|gb|EEU53343.1| riboflavin biosynthesis protein RibD [Parabacteroides sp. D13]
          Length = 359

 Score =  117 bits (295), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 40/150 (26%), Positives = 63/150 (42%), Gaps = 23/150 (15%)

Query: 5   NVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
             +M+  +E A+    R  +   P VGAV V   +II    +R        AHAE+ AI 
Sbjct: 6   EKYMARCIELAKGG--RGNVSPNPMVGAVVVHKGRIIGEGFHRKCGE----AHAEVNAI- 58

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
               +  + +L +  +YV+LEPC        CA  I    I R+  G  +P       G 
Sbjct: 59  --ASVKDESLLKDSTIYVSLEPCSHYGKTPPCAELIIRKGIPRVVVGCLDPFPEVSGRGV 116

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
           +    A      E+  G+ E+ +R + + F
Sbjct: 117 RMLREAG----VEVVTGVMEEEARALNKAF 142


>gi|311277409|ref|YP_003939640.1| CMP/dCMP deaminase zinc-binding protein [Enterobacter cloacae SCF1]
 gi|308746604|gb|ADO46356.1| CMP/dCMP deaminase zinc-binding protein [Enterobacter cloacae SCF1]
          Length = 151

 Score =  117 bits (295), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 34/142 (23%), Positives = 58/142 (40%), Gaps = 4/142 (2%)

Query: 7   FMSCALEEAQNAALRN-EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           +M  A++   +    N   P GA  V N +++    N      D +AHAE++AIR  C+ 
Sbjct: 3   YMKLAVDATIHGMENNIGGPFGATIVRNGEVVVAISNTMTRDTDPSAHAELVAIREACKK 62

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
                L + ++Y T EPC MC A I    I+++YY +++          Q          
Sbjct: 63  RGTFDLSDCEIYATCEPCPMCVAVIIWTGIKKVYYCSTHHDAHTHGFSDQHLRDYFSGKD 122

Query: 126 PEIYPGIS---EQRSRQIIQDF 144
                 I+    +   ++   F
Sbjct: 123 TSCLDMINVAKREDCDRLFSYF 144


>gi|323306816|gb|EGA60101.1| Fcy1p [Saccharomyces cerevisiae FostersO]
          Length = 158

 Score =  117 bits (294), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 37/149 (24%), Positives = 58/149 (38%), Gaps = 11/149 (7%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAI 59
           K     M  A EEA        +P+G   +   +  ++ R  N   +    T H EI  +
Sbjct: 9   KWDQKGMDIAYEEAALGYKEGGVPIGGCLINNKDGSVLGRGHNMRFQKGSATLHGEISTL 68

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
               R+   ++  +  LY TL PC MC  AI +  I R   G  N              L
Sbjct: 69  ENCGRLEG-KVYKDTTLYTTLSPCDMCTGAIIMYGIPRCVVG-ENXNFKSKGEKY----L 122

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKER 148
            T  H   +   + ++R ++I++ F  ER
Sbjct: 123 QTRGHEVVV---VDDERCKKIMKQFIDER 148


>gi|323331315|gb|EGA72733.1| Fcy1p [Saccharomyces cerevisiae AWRI796]
          Length = 153

 Score =  117 bits (294), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 39/150 (26%), Positives = 62/150 (41%), Gaps = 13/150 (8%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAI 59
           K     M  A EEA        +P+G   +   +  ++ R  N   +    T H EI  +
Sbjct: 4   KWDQKGMDIAYEEAALGYKEGGVPIGGCLINNKDGSVLGRGHNMRFQKGSATLHGEISTL 63

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS-NPKGGGIENGTQFYT 118
               R+   ++  +  LY TL PC MC  AI +  I R   G + N K  G +       
Sbjct: 64  ENCGRLEG-KVYKDTTLYTTLSPCDMCTGAIIMYGIPRCVVGENVNFKSKGEK------Y 116

Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKER 148
           L T  H   +   + ++R ++I++ F  ER
Sbjct: 117 LQTRGHEVVV---VDDERCKKIMKQFIDER 143


>gi|85860188|ref|YP_462390.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Syntrophus aciditrophicus SB]
 gi|85723279|gb|ABC78222.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Syntrophus aciditrophicus SB]
          Length = 380

 Score =  117 bits (294), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 39/154 (25%), Positives = 61/154 (39%), Gaps = 25/154 (16%)

Query: 3   KGNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
               +M  AL+ A+       +   P VG+V V N++II    +R        AHAEI A
Sbjct: 2   NDEFYMKRALQLARKG--EGWVSPNPMVGSVIVKNDRIIGEGYHRKFGE----AHAEINA 55

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
           +        +E      +YV+LEPC        C   +   R +R+  G ++P       
Sbjct: 56  LNGA-----KESAEGSTIYVSLEPCSHYGKTPPCVERLVACRPKRVVIGTTDPNPLVAGR 110

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
           G             E+  G+ E+  R+I + F K
Sbjct: 111 GIGILKRNG----IEVTVGVLEEVCREINESFLK 140


>gi|85014509|ref|XP_955750.1| deoxycytidylate deaminase [Encephalitozoon cuniculi GB-M1]
 gi|19171444|emb|CAD27169.1| BELONGS TO THE CYTIDINE AND DEOXYCYTIDYLATE DEAMINASE FAMILY
           [Encephalitozoon cuniculi GB-M1]
          Length = 150

 Score =  117 bits (294), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 40/147 (27%), Positives = 59/147 (40%), Gaps = 23/147 (15%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
              + FM  A++EA  A    E+PVG V V N  ++S++ N     K    HAE+++IR 
Sbjct: 6   TTHSFFMEMAVKEAMRAFDALEVPVGCVVVRNGIVVSKSHNMTNANKSPLDHAEVISIRD 65

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGG---GIENGTQFYT 118
                          YVT EPC MC   +   +   +YYG  N   G       G +   
Sbjct: 66  A-------DCSNSTFYVTCEPCIMCMGILGRLKGVEVYYGCRNEVFGSETVCGIGIKSTY 118

Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFF 145
           L              + R  +I+Q F+
Sbjct: 119 LP-------------DSRCFEILQRFY 132


>gi|71026495|ref|XP_762917.1| cytidine deaminase [Theileria parva strain Muguga]
 gi|68349869|gb|EAN30634.1| cytidine deaminase, putative [Theileria parva]
          Length = 153

 Score =  117 bits (294), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 35/127 (27%), Positives = 53/127 (41%), Gaps = 14/127 (11%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLN--NKIISRAGNRNRELKDVTAHAEILAIRMG 62
             FM  ALEEA+ A  + E+ V  + V     ++++ + N      + T H E+ AI   
Sbjct: 10  ENFMKLALEEAKKALDKEEVAVACIIVSKATREVVASSSNATNLTYNSTWHCELEAINKL 69

Query: 63  CRILSQ------------EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI 110
             +               E      L+VT EPC MC  A+ L  +  +YYG  N K GG 
Sbjct: 70  IDMEPNGYKSQQDSGKLREFCSGFVLFVTCEPCIMCTTALQLIGLTEVYYGCKNEKFGGC 129

Query: 111 ENGTQFY 117
            +    +
Sbjct: 130 GSVLSLH 136


>gi|269962351|ref|ZP_06176701.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Vibrio
           harveyi 1DA3]
 gi|269832847|gb|EEZ86956.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Vibrio
           harveyi 1DA3]
          Length = 374

 Score =  117 bits (294), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 37/152 (24%), Positives = 57/152 (37%), Gaps = 21/152 (13%)

Query: 3   KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +    MS AL+ A+         P VG V V + +I+    +          HAE+ A+R
Sbjct: 13  QDFEMMSRALKLAKRGIYTTAPNPNVGCVIVRDGEIVGEGHHHRAGE----PHAEVHAMR 68

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           M               YVTLEPC        CA  +  A++ R+     +P       G 
Sbjct: 69  MAGDKA-----EGATAYVTLEPCSHYGRTPPCAEGLIKAKVARVVCAMEDPNPKVAGRGF 123

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
           Q    A      E+  G+ E  + ++ + F K
Sbjct: 124 QMLRDAG----VEVQVGLLENEAIELNKGFIK 151


>gi|6325319|ref|NP_015387.1| Fcy1p [Saccharomyces cerevisiae S288c]
 gi|2493561|sp|Q12178|FCY1_YEAST RecName: Full=Cytosine deaminase; AltName: Full=Cytosine
           aminohydrolase
 gi|30750134|pdb|1UAQ|A Chain A, The Crystal Structure Of Yeast Cytosine Deaminase
 gi|30750135|pdb|1UAQ|B Chain B, The Crystal Structure Of Yeast Cytosine Deaminase
 gi|805042|emb|CAA89179.1| unknown [Saccharomyces cerevisiae]
 gi|1314130|emb|CAA95006.1| unknown [Saccharomyces cerevisiae]
 gi|1762322|gb|AAC13409.1| cytosine deaminase [Saccharomyces cerevisiae]
 gi|2343114|gb|AAB67713.1| cytosine deaminase [Saccharomyces cerevisiae]
 gi|151942846|gb|EDN61192.1| cytosine deaminase [Saccharomyces cerevisiae YJM789]
 gi|190407999|gb|EDV11264.1| cytosine deaminase [Saccharomyces cerevisiae RM11-1a]
 gi|256268919|gb|EEU04266.1| Fcy1p [Saccharomyces cerevisiae JAY291]
 gi|259150215|emb|CAY87018.1| Fcy1p [Saccharomyces cerevisiae EC1118]
 gi|285815591|tpg|DAA11483.1| TPA: Fcy1p [Saccharomyces cerevisiae S288c]
 gi|323302562|gb|EGA56369.1| Fcy1p [Saccharomyces cerevisiae FostersB]
 gi|323335147|gb|EGA76437.1| Fcy1p [Saccharomyces cerevisiae Vin13]
 gi|323346295|gb|EGA80585.1| Fcy1p [Saccharomyces cerevisiae Lalvin QA23]
 gi|323350206|gb|EGA84353.1| Fcy1p [Saccharomyces cerevisiae VL3]
          Length = 158

 Score =  117 bits (294), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 39/150 (26%), Positives = 62/150 (41%), Gaps = 13/150 (8%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAI 59
           K     M  A EEA        +P+G   +   +  ++ R  N   +    T H EI  +
Sbjct: 9   KWDQKGMDIAYEEAALGYKEGGVPIGGCLINNKDGSVLGRGHNMRFQKGSATLHGEISTL 68

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS-NPKGGGIENGTQFYT 118
               R+   ++  +  LY TL PC MC  AI +  I R   G + N K  G +       
Sbjct: 69  ENCGRLEG-KVYKDTTLYTTLSPCDMCTGAIIMYGIPRCVVGENVNFKSKGEK------Y 121

Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKER 148
           L T  H   +   + ++R ++I++ F  ER
Sbjct: 122 LQTRGHEVVV---VDDERCKKIMKQFIDER 148


>gi|229916731|ref|YP_002885377.1| riboflavin biosynthesis protein RibD [Exiguobacterium sp. AT1b]
 gi|229468160|gb|ACQ69932.1| riboflavin biosynthesis protein RibD [Exiguobacterium sp. AT1b]
          Length = 354

 Score =  117 bits (294), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 42/156 (26%), Positives = 64/156 (41%), Gaps = 24/156 (15%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           MK+   +M  A++ A++A  +  + P VGAV V + +I+    +          HAE+ A
Sbjct: 1   MKQ---YMEQAIQLAKSADGQTGVNPLVGAVLVKDGRIVGMGAHLKAGE----PHAEVHA 53

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
           IRM              LYVTLEPC        CA  I  + I+R+     +P      N
Sbjct: 54  IRMAGAAAY-----GATLYVTLEPCSHHGKTPPCADLIVESGIKRVVIAMKDPNPLVAGN 108

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKER 148
           G      A      E+  G+ E  +R +   F +  
Sbjct: 109 GIMRLQAAG----VEVDVGLLEAEARALNPAFLRSL 140


>gi|331004720|ref|ZP_08328174.1| hypothetical protein HMPREF0491_03036 [Lachnospiraceae oral taxon
           107 str. F0167]
 gi|330409099|gb|EGG88557.1| hypothetical protein HMPREF0491_03036 [Lachnospiraceae oral taxon
           107 str. F0167]
          Length = 160

 Score =  117 bits (294), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 41/156 (26%), Positives = 60/156 (38%), Gaps = 12/156 (7%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIR 60
           KK   ++   +E +QNA      P GA+ V    KI+    N     K  T HAE     
Sbjct: 4   KKHEYYLRRCIEISQNARNNGNTPFGAILVDEYGKILLEQENIEITGKICTGHAETTLAE 63

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPK----GGGIENGTQF 116
               + S+E L    LY T EPC MC  AI  A I R+ +  +  +     G  E    F
Sbjct: 64  RASHLYSKEFLWRCTLYTTAEPCAMCTGAIYWANIGRVVFAMTERRLLELTGNNEQNPTF 123

Query: 117 Y-----TLATCHHSPEIYPG--ISEQRSRQIIQDFF 145
                   A      E+     + E+ +  I + ++
Sbjct: 124 DLPCRKIFAAGQKKIEVIGPVSVLEEEAAAIHKGYW 159


>gi|326941086|gb|AEA16982.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Bacillus
           thuringiensis serovar chinensis CT-43]
          Length = 365

 Score =  117 bits (294), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 44/153 (28%), Positives = 66/153 (43%), Gaps = 23/153 (15%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57
           M +  ++M  ALE A  A      P   VG+V V +N+I+    +          HAEI 
Sbjct: 1   MLEHELYMKLALENA-KAMKGQTTPNPLVGSVIVNDNRIVGVGAHMKAGE----PHAEIH 55

Query: 58  AIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIE 111
           AIRM       E      +YVTLEPC+       CA AI  A I+++     +P      
Sbjct: 56  AIRMAG-----EQARGATIYVTLEPCSHYGRTGPCAEAIVQAGIKKVVVATLDPNPLVSG 110

Query: 112 NGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
            G +    A      E+  G+ E+ S+++ + F
Sbjct: 111 RGIKILQDAG----IEVLVGVCEEESKKMNEVF 139


>gi|50286109|ref|XP_445483.1| hypothetical protein [Candida glabrata CBS 138]
 gi|49524788|emb|CAG58394.1| unnamed protein product [Candida glabrata]
 gi|109706861|gb|ABG43005.1| cytosine deaminase [Candida glabrata]
 gi|109706865|gb|ABG43007.1| cytosine deaminase [Candida glabrata]
          Length = 155

 Score =  117 bits (294), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 34/143 (23%), Positives = 57/143 (39%), Gaps = 11/143 (7%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M  A EEA        +P+G   +   +  ++ R  N   +    T H EI  +    R+
Sbjct: 12  MKIAYEEAAKGFEEGGVPIGGCLINNKDGTVLGRGHNMRFQKGSPTLHGEISTLENCGRL 71

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
              ++  +  LY TL PC MC  AI L  I R   G S+        G ++         
Sbjct: 72  EG-KVYKDTTLYTTLSPCDMCTGAILLYGIPRCVIGESDNFK---SPGEEYLKSRG---- 123

Query: 126 PEIYPGISEQRSRQIIQDFFKER 148
            E+   ++++  + I++ F   R
Sbjct: 124 VEVVQ-MNDEPCKAIMKKFIDTR 145


>gi|253681051|ref|ZP_04861854.1| riboflavin biosynthesis protein RibD [Clostridium botulinum D str.
           1873]
 gi|253562900|gb|EES92346.1| riboflavin biosynthesis protein RibD [Clostridium botulinum D str.
           1873]
          Length = 372

 Score =  117 bits (294), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 38/151 (25%), Positives = 64/151 (42%), Gaps = 21/151 (13%)

Query: 4   GNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
              +M  A+E ++           VGA+ V +NKII    ++         HAEI A++ 
Sbjct: 2   DLSYMKRAIELSKLGIGYTYPNPLVGAIIVKDNKIIGEGYHKRFGEN----HAEINALKN 57

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
                 +E +    +YVTLEPC        C  AI  + I+++  G S+P       GT+
Sbjct: 58  A-----KEDVSGATMYVTLEPCSHYGKTPPCVNAIIKSGIKKVIIGMSDPNPLVAGRGTR 112

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
                      E+  GI ++  +++ + F K
Sbjct: 113 ILKDNG----IEVVEGILKEEVKKVNEIFIK 139


>gi|146283237|ref|YP_001173390.1| cytidine/deoxycytidylate deaminase family protein [Pseudomonas
           stutzeri A1501]
 gi|145571442|gb|ABP80548.1| cytidine/deoxycytidylate deaminase family protein [Pseudomonas
           stutzeri A1501]
 gi|327481632|gb|AEA84942.1| cytidine/deoxycytidylate deaminase family protein [Pseudomonas
           stutzeri DSM 4166]
          Length = 156

 Score =  117 bits (294), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 29/154 (18%), Positives = 52/154 (33%), Gaps = 22/154 (14%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRM 61
                +  + + A+ A      P GA+ V  + +++   GN      D+T HAE + +  
Sbjct: 4   DDLALLRKSFDVARRALENGTHPFGAILVGPDGEVLLEQGNAYMPDHDMTGHAERVLMTR 63

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
                + E L    +Y + EPC MCA A     + R+ YG S        +         
Sbjct: 64  ASTRYTPEFLSRCTMYTSAEPCAMCAGAAYWVGLGRVVYGLSE------RSLKDLTGNHP 117

Query: 122 CHH---------------SPEIYPGISEQRSRQI 140
            +                  E+   + E  +  +
Sbjct: 118 ENPTLDLPCRIVFDAGQRKVEVLGPLLEDEAAAL 151


>gi|119394655|gb|ABL74489.1| putative cytidine deaminase [Zea mays]
 gi|119394657|gb|ABL74490.1| putative cytidine deaminase [Zea mays]
          Length = 186

 Score =  117 bits (294), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 41/112 (36%), Positives = 61/112 (54%), Gaps = 1/112 (0%)

Query: 2   KKGNVFMSCALEEAQNAALRNEI-PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
            K + F++ A+EEA       +  P GAV V N++++    N   +  D TAHAE+ AIR
Sbjct: 29  DKDHKFLTKAVEEAYRGVDCGDGGPFGAVVVRNDEVVVSCHNMVLKHTDPTAHAEVTAIR 88

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN 112
             C+ L +  L + ++Y + EPC MC  A+ L+RI+RL YGA       I  
Sbjct: 89  EACKKLGKIELSDCEIYASCEPCPMCFGAVHLSRIKRLVYGAKAEAAIAIGF 140


>gi|332652827|ref|ZP_08418572.1| riboflavin biosynthesis protein RibD [Ruminococcaceae bacterium
           D16]
 gi|332517973|gb|EGJ47576.1| riboflavin biosynthesis protein RibD [Ruminococcaceae bacterium
           D16]
          Length = 368

 Score =  117 bits (294), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 39/151 (25%), Positives = 57/151 (37%), Gaps = 21/151 (13%)

Query: 3   KGNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
               +M+ ALE A+           VGAV V + +II +  +          HAE  A++
Sbjct: 2   NDTDYMNLALELARRGMGWTSPNPMVGAVLVKDGEIIGQGWHTRYGEL----HAEREALK 57

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
                          LYVTLEPC        C  AI  A I R+  G+ +P       G 
Sbjct: 58  N-----CTGSPAGTTLYVTLEPCCHQGRQPPCTQAILDAGITRVVVGSDDPNPLVAGKGL 112

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
           +        H  ++  G+ +Q    + Q FF
Sbjct: 113 ELLRE----HGIQVETGVCKQACDALNQVFF 139


>gi|46143613|ref|ZP_00134868.2| COG1985: Pyrimidine reductase, riboflavin biosynthesis
           [Actinobacillus pleuropneumoniae serovar 1 str. 4074]
 gi|307247384|ref|ZP_07529431.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Actinobacillus
           pleuropneumoniae serovar 2 str. S1536]
 gi|307260857|ref|ZP_07542543.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Actinobacillus
           pleuropneumoniae serovar 12 str. 1096]
 gi|306856081|gb|EFM88237.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Actinobacillus
           pleuropneumoniae serovar 2 str. S1536]
 gi|306869424|gb|EFN01215.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Actinobacillus
           pleuropneumoniae serovar 12 str. 1096]
          Length = 364

 Score =  117 bits (294), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 35/151 (23%), Positives = 58/151 (38%), Gaps = 21/151 (13%)

Query: 3   KGNVFMSCALEEAQNAAL-RNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
               +M  A+  A+      N  P VG V V N +I++   +          HAE  A+ 
Sbjct: 2   TDLDYMRRAIALAKQGLGWTNPNPLVGCVIVKNGEIVAEGYHEKIGG----WHAERNAV- 56

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
               +  +E L     YVTLEPC        C+  +    I++++ G+S+P       G 
Sbjct: 57  ----LHCKEDLSGATAYVTLEPCCHHGRTPPCSDLLIERGIKKVFIGSSDPNPLVAGRGA 112

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
                A      E+  G+ ++    +   FF
Sbjct: 113 NQLRQAG----VEVVEGLLKEECDALNPIFF 139


>gi|322514846|ref|ZP_08067864.1| riboflavin biosynthesis protein RibD [Actinobacillus ureae ATCC
           25976]
 gi|322119150|gb|EFX91295.1| riboflavin biosynthesis protein RibD [Actinobacillus ureae ATCC
           25976]
          Length = 361

 Score =  117 bits (294), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 37/151 (24%), Positives = 58/151 (38%), Gaps = 21/151 (13%)

Query: 3   KGNVFMSCALEEAQNAAL-RNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
               +M  A+  A+      N  P VG V V N +I++   +          HAE  AI 
Sbjct: 2   TDLDYMRRAIVLAKQGLGWTNPNPLVGCVIVKNGEIVAEGYHEKIGG----WHAERNAI- 56

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
               +  +E L E   YVTLEPC        C+  +    I++++ G+S+P       G 
Sbjct: 57  ----LHCKEDLSEATAYVTLEPCCHHGRTPPCSDLLIERGIKKVFIGSSDPNPLVAGRGA 112

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
                A      E+  G+ +     +   FF
Sbjct: 113 SQLRQAG----VEVVEGLLKDECDALNPIFF 139


>gi|190149675|ref|YP_001968200.1| riboflavin biosynthesis protein [Actinobacillus pleuropneumoniae
           serovar 7 str. AP76]
 gi|189914806|gb|ACE61058.1| riboflavin biosynthesis protein [Actinobacillus pleuropneumoniae
           serovar 7 str. AP76]
          Length = 379

 Score =  117 bits (294), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 35/151 (23%), Positives = 58/151 (38%), Gaps = 21/151 (13%)

Query: 3   KGNVFMSCALEEAQNAAL-RNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
               +M  A+  A+      N  P VG V V N +I++   +          HAE  A+ 
Sbjct: 17  TDLDYMRRAIALAKQGLGWTNPNPLVGCVIVKNGEIVAEGYHEKIGG----WHAERNAV- 71

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
               +  +E L     YVTLEPC        C+  +    I++++ G+S+P       G 
Sbjct: 72  ----LHCKEDLSGATAYVTLEPCCHHGRTPPCSDLLIERGIKKVFIGSSDPNPLVAGRGA 127

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
                A      E+  G+ ++    +   FF
Sbjct: 128 NQLRQAG----VEVVEGLLKEECDALNPIFF 154


>gi|220931842|ref|YP_002508750.1| riboflavin biosynthesis protein RibD [Halothermothrix orenii H 168]
 gi|219993152|gb|ACL69755.1| riboflavin biosynthesis protein RibD [Halothermothrix orenii H 168]
          Length = 366

 Score =  117 bits (294), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 37/155 (23%), Positives = 58/155 (37%), Gaps = 21/155 (13%)

Query: 1   MKKGNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           M K   +M  AL  A+           VGAV V ++KI+    +R         HAE+ A
Sbjct: 1   MDKDIYYMEKALTLARKGVGYTSPNPMVGAVVVRDDKIVGEGHHRYYGG----PHAEVYA 56

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
           +                LYV LEPC        C   I  + ++R+     +P       
Sbjct: 57  LEEAGEKAF-----GSTLYVNLEPCSHYGKTPPCVFKIIESGVKRVVISMVDPNPRVSGK 111

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
           G +    A      E+  G+ E+++R + + F K 
Sbjct: 112 GIEMLKKAG----IEVTVGVLEEKARNLNEVFIKN 142


>gi|171779591|ref|ZP_02920547.1| hypothetical protein STRINF_01428 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
 gi|171281693|gb|EDT47127.1| hypothetical protein STRINF_01428 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
          Length = 351

 Score =  117 bits (294), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 43/152 (28%), Positives = 65/152 (42%), Gaps = 21/152 (13%)

Query: 4   GNVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
            N +MS A+ EA+    +      VGAV V +N +I+R  +     +    HAE  AI  
Sbjct: 2   DNYYMSQAIAEAKKGFRQTYTNPLVGAVIVKDNHVIARGAHLQYGHE----HAEKNAI-- 55

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
                + E L +  LYVTLEPC        C  AI  A I+++  G  +P       G  
Sbjct: 56  -LHCQTPEELVDSTLYVTLEPCHHRGKQPPCTQAILAAGIKKVVVGQLDPNPLVAGKGLA 114

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQ--DFF 145
           F          E+  G+ E+ +R +    +F+
Sbjct: 115 FLKEEG----IEVVTGVLEEEARGLNSHYNFY 142


>gi|78043574|ref|YP_360307.1| riboflavin biosynthesis protein RibD [Carboxydothermus
           hydrogenoformans Z-2901]
 gi|77995689|gb|ABB14588.1| riboflavin biosynthesis protein RibD [Carboxydothermus
           hydrogenoformans Z-2901]
          Length = 361

 Score =  117 bits (294), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 37/154 (24%), Positives = 60/154 (38%), Gaps = 24/154 (15%)

Query: 3   KGNVFMSCALEEAQNAALR---NEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILA 58
                M  AL+ A+ A  R   N + VGAV V  +  I+    ++   L     HAE  A
Sbjct: 2   NDQQLMKRALKLAKRALGRTSPNPV-VGAVIVDKDGNIVGEGYHKKAGL----PHAEREA 56

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
           +++              +YVTLEPC        C  AI  A I+++     +P       
Sbjct: 57  LKVAGEKA-----RGGTMYVTLEPCCHYGRTPPCTDAIIAAGIKKVVVAVRDPNPKVSGK 111

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
           G +       +   E+  G+  + +  + + FFK
Sbjct: 112 GIEILR----NAGIEVVEGVLAEEAFYLNEKFFK 141


>gi|115713119|ref|XP_781669.2| PREDICTED: similar to DEADC1 protein, partial [Strongylocentrotus
           purpuratus]
          Length = 104

 Score =  116 bits (293), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 35/94 (37%), Positives = 49/94 (52%), Gaps = 6/94 (6%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
              +M  A+  A+ A  R E+PVG + V  ++II   GN   E K+ T HAEILA+    
Sbjct: 9   DEKWMKEAVNMAKQALGRGEVPVGCLLVYEDQIIGTGGNAANETKNATRHAEILALEEAM 68

Query: 64  RILSQEIL------PEVDLYVTLEPCTMCAAAIS 91
           R    + L       +  L+VT+EPC MCA A+ 
Sbjct: 69  RWCDDKQLERGELFSQTKLFVTVEPCIMCAGALR 102


>gi|226314093|ref|YP_002773989.1| hypothetical protein BBR47_45080 [Brevibacillus brevis NBRC 100599]
 gi|226097043|dbj|BAH45485.1| conserved hypothetical protein [Brevibacillus brevis NBRC 100599]
          Length = 150

 Score =  116 bits (293), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 33/95 (34%), Positives = 48/95 (50%), Gaps = 1/95 (1%)

Query: 7   FMSCALEEAQNAALRN-EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           +M  A+E+           P GA  V  N+II+   NR     D + HAE++AIR  C+ 
Sbjct: 3   YMKLAVEKTLEGMNNKLGGPFGAAVVKGNEIIAVCSNRMMADMDPSQHAEMVAIREACKA 62

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
           L    L   ++Y T EPC MC  AI  + I+ ++Y
Sbjct: 63  LGTMDLAGCEIYATCEPCPMCVGAIIWSGIKVVHY 97


>gi|332290249|ref|YP_004421101.1| hypothetical protein UMN179_02191 [Gallibacterium anatis UMN179]
 gi|330433145|gb|AEC18204.1| conserved hypothetical protein [Gallibacterium anatis UMN179]
          Length = 372

 Score =  116 bits (293), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 37/156 (23%), Positives = 62/156 (39%), Gaps = 21/156 (13%)

Query: 2   KKGNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
           ++ + FM+ A+E A+           VG V V N +I+ +  +          HAE++A+
Sbjct: 8   QQDHQFMALAIELAKKGRFTCTPNPAVGCVLVKNGEIVGKGYHEKAGE----PHAEVMAM 63

Query: 60  RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113
           R                YVTLEPC        CA  +  A ++R+     +P       G
Sbjct: 64  REAGEKA-----NGATAYVTLEPCSHYGRTPPCAKGLIEAGVKRVVAAMQDPNPQVAGRG 118

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +    A      E   G+ +Q++ Q+ + F K  R
Sbjct: 119 LKMLADAG----IETAVGLLQQQAEQLNKGFLKRMR 150


>gi|269119566|ref|YP_003307743.1| CMP/dCMP deaminase zinc-binding protein [Sebaldella termitidis ATCC
           33386]
 gi|268613444|gb|ACZ07812.1| CMP/dCMP deaminase zinc-binding protein [Sebaldella termitidis ATCC
           33386]
          Length = 160

 Score =  116 bits (293), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 34/106 (32%), Positives = 45/106 (42%), Gaps = 1/106 (0%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIR 60
           K    ++  A+E ++ A      P GA+ V     II   GN     K  T HAE     
Sbjct: 4   KSHEFYLERAIEVSKEARESGNTPFGAILVDKEGNIIMEQGNIEITAKKCTGHAEASLAE 63

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPK 106
                 S+E L +  LY T EPC MCA AI  A I  + Y  +  +
Sbjct: 64  RASHEYSKEFLWDCTLYTTAEPCCMCAGAIYWANIGTVAYAMTEKR 109


>gi|77461240|ref|YP_350747.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase /
           diaminohydroxyphosphoribosylaminopyrimidine deaminase
           [Pseudomonas fluorescens Pf0-1]
 gi|77385243|gb|ABA76756.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Pseudomonas
           fluorescens Pf0-1]
          Length = 376

 Score =  116 bits (293), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 42/152 (27%), Positives = 58/152 (38%), Gaps = 21/152 (13%)

Query: 4   GNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
              FM+ ALE A+      +  P VG V V + +I+    +          HAE+ A+R 
Sbjct: 10  DAHFMARALELARKGHYTTHPNPRVGCVIVRDGQIVGEGWHERAGE----PHAEVHALRA 65

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
                  E       YVTLEPC        CA A+  A I R+     +P       G Q
Sbjct: 66  AG-----ERARGATAYVTLEPCSHHGRTPPCADALVNAGIGRVVAAMRDPNPQVAGRGLQ 120

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
             T A          G+ E  +R++ Q F K 
Sbjct: 121 RLTDAG----IATESGVLEAEARKLNQGFLKR 148


>gi|116694008|ref|YP_728219.1| putative cytosine/adenosine deaminase [Ralstonia eutropha H16]
 gi|113528507|emb|CAJ94854.1| Putative Cytosine/adenosine deaminase [Ralstonia eutropha H16]
          Length = 145

 Score =  116 bits (293), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 32/100 (32%), Positives = 48/100 (48%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  A+  A     R   P GAV VL+ + ++   N      D T HAE+ A+R   R L 
Sbjct: 1   MREAVRLAAANRDRGARPFGAVLVLDGEAVATGVNDIVHSHDPTTHAEMEAVRAAARKLG 60

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKG 107
           +  L    +Y +  PC MC AA+++A ++ +YY   N   
Sbjct: 61  RPDLRGSVVYASGHPCPMCLAAMTMAGVQAVYYAFDNHDA 100


>gi|262382448|ref|ZP_06075585.1| riboflavin biosynthesis protein RibD [Bacteroides sp. 2_1_33B]
 gi|262295326|gb|EEY83257.1| riboflavin biosynthesis protein RibD [Bacteroides sp. 2_1_33B]
          Length = 345

 Score =  116 bits (293), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 40/154 (25%), Positives = 65/154 (42%), Gaps = 23/154 (14%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56
           ++    +M+  +E A+    R  +   P VGAV V   +II    +R        AHAE+
Sbjct: 2   IEVEEKYMARCIELAKGG--RGNVSPNPMVGAVVVHKGRIIGEGFHRKCGE----AHAEV 55

Query: 57  LAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGI 110
            AI     +  + +L +  +YV+LEPC        CA  I    I R+  G  +P     
Sbjct: 56  NAI---ASVKDESLLKDSTIYVSLEPCSHYGKTPPCAELIIRKGIPRVVVGCLDPFPEVS 112

Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
             G +    A      E+  G+ E+ +R + + F
Sbjct: 113 GRGVRMLREAG----VEVVTGVMEEEARVLNKAF 142


>gi|220910961|ref|YP_002486270.1| CMP/dCMP deaminase zinc-binding [Arthrobacter chlorophenolicus A6]
 gi|219857839|gb|ACL38181.1| CMP/dCMP deaminase zinc-binding [Arthrobacter chlorophenolicus A6]
          Length = 160

 Score =  116 bits (293), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 32/130 (24%), Positives = 52/130 (40%), Gaps = 14/130 (10%)

Query: 16  QNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVD 75
           + ++    IP+GA    N  +I+   N   +  D  AH E+ A+R   R  S     +  
Sbjct: 30  RKSSSEGGIPIGAALARNGVVIASGHNERVQNGDPIAHGEMSALRAAGRQRS---YRDTT 86

Query: 76  LYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQ 135
           LY TL PC MC   I   +I R+  G +    G  E               E+   + + 
Sbjct: 87  LYTTLAPCAMCTGTIIQFKIPRVVVGEARTFPGEFE----LLRSRG----VEVI--VLDD 136

Query: 136 -RSRQIIQDF 144
            R   ++++F
Sbjct: 137 QRCVDMMREF 146


>gi|27379891|ref|NP_771420.1| cytosine deaminase [Bradyrhizobium japonicum USDA 110]
 gi|27353044|dbj|BAC50045.1| bll4780 [Bradyrhizobium japonicum USDA 110]
          Length = 150

 Score =  116 bits (293), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 34/141 (24%), Positives = 68/141 (48%), Gaps = 13/141 (9%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
              FM  A+ EA+ +  +  +P+GAV   +N+II+R  N   +  +V  H E+  +R   
Sbjct: 7   HFDFMLEAIREAEASIAQGGLPIGAVLTRDNQIIARGHNNRVQENNVILHGEMSCLREAG 66

Query: 64  RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123
            I       +  +Y TL PC+MCA A++L +++ +  G S    G  ++    + +    
Sbjct: 67  AIT----FHDTIMYTTLSPCSMCAGALALFKVKLVVIGESVTFPG-SKDILDKFGIPWID 121

Query: 124 HSPEIYPGISEQRSRQIIQDF 144
                   +++ RS  +++++
Sbjct: 122 --------LADDRSITMMKNW 134


>gi|299538422|ref|ZP_07051705.1| riboflavin biosynthesis protein ribD [Lysinibacillus fusiformis
           ZC1]
 gi|298726009|gb|EFI66601.1| riboflavin biosynthesis protein ribD [Lysinibacillus fusiformis
           ZC1]
          Length = 370

 Score =  116 bits (293), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 41/154 (26%), Positives = 60/154 (38%), Gaps = 25/154 (16%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56
           M     +M  AL+ A  A+ +      P VGAV V N  I+    +R         HAE+
Sbjct: 2   MNVDEKYMQLALDLA--ASAKGNTNPNPLVGAVIVKNGVIVGTGLHRKAGE----PHAEV 55

Query: 57  LAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGI 110
            A RM              LYVTLEPC        CA  +  + + R+     +P     
Sbjct: 56  HAFRMAGEHAM-----GATLYVTLEPCSHYGKTPPCANLVKESGVSRVVVAMQDPNPAVA 110

Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
             G Q    A       +  G+ EQ++R++ + F
Sbjct: 111 GRGIQLLQDAG----IVVEVGVLEQQARRLNERF 140


>gi|296503905|ref|YP_003665605.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Bacillus
           thuringiensis BMB171]
 gi|296324957|gb|ADH07885.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Bacillus
           thuringiensis BMB171]
          Length = 365

 Score =  116 bits (293), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 44/153 (28%), Positives = 66/153 (43%), Gaps = 23/153 (15%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57
           M +  ++M  ALE A  A      P   VG+V V +N+I+    +          HAEI 
Sbjct: 1   MLEHELYMKLALENA-KAMKGQTTPNPLVGSVIVNDNRIVGVGAHMKAGE----PHAEIH 55

Query: 58  AIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIE 111
           AIRM       E      +YVTLEPC+       CA AI  A I+++     +P      
Sbjct: 56  AIRMAG-----EQARGATIYVTLEPCSHHGRTGPCAEAIVQAGIKKVVVATLDPNPLVSG 110

Query: 112 NGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
            G +    A      E+  G+ E+ S+++ + F
Sbjct: 111 RGIKILQDAG----IEVLVGVCEEESKKMNEVF 139


>gi|167768613|ref|ZP_02440666.1| hypothetical protein CLOSS21_03172 [Clostridium sp. SS2/1]
 gi|167710137|gb|EDS20716.1| hypothetical protein CLOSS21_03172 [Clostridium sp. SS2/1]
          Length = 361

 Score =  116 bits (293), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 42/146 (28%), Positives = 59/146 (40%), Gaps = 21/146 (14%)

Query: 8   MSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M  A+E A+      N  P VGAV V + K+I    +          HAE  A++     
Sbjct: 1   MRRAIELAKKGCGYTNPNPLVGAVIVKDQKVIGEGYHEKIGGL----HAERNALKN---- 52

Query: 66  LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
              E     ++YVTLEPC        C  A+  A I+++Y G  +P       G +    
Sbjct: 53  -CIEDPKGAEIYVTLEPCCHYGKTPPCTEALIEAGIKKVYVGNLDPNPKVAGGGIKILND 111

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFF 145
               H  E   GI E+  RQ+   FF
Sbjct: 112 ----HGIETETGILEEECRQLNDIFF 133


>gi|206890490|ref|YP_002249110.1| riboflavin biosynthesis protein RibD [Thermodesulfovibrio
           yellowstonii DSM 11347]
 gi|206742428|gb|ACI21485.1| riboflavin biosynthesis protein RibD [Thermodesulfovibrio
           yellowstonii DSM 11347]
          Length = 370

 Score =  116 bits (293), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 39/127 (30%), Positives = 54/127 (42%), Gaps = 21/127 (16%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC-- 83
           VGAV V N KIIS   ++   L     HAE  AIR        E L    LYVTLEPC  
Sbjct: 32  VGAVIVKNGKIISEGYHKKAGL----PHAEAEAIRNA-----NESLKGATLYVTLEPCCH 82

Query: 84  -----TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSR 138
                  C  AI  + I R+  G  +P       G +       +H  ++  G+ E+   
Sbjct: 83  KDKKTPPCTDAIINSGINRVVIGMRDPNPKVSGKGVEILN----NHGIKVIEGVLEEE-V 137

Query: 139 QIIQDFF 145
           + + +F+
Sbjct: 138 KKLNEFY 144


>gi|78188601|ref|YP_378939.1| riboflavin biosynthesis protein RibD [Chlorobium chlorochromatii
           CaD3]
 gi|78170800|gb|ABB27896.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Chlorobium chlorochromatii CaD3]
          Length = 366

 Score =  116 bits (293), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 43/152 (28%), Positives = 61/152 (40%), Gaps = 19/152 (12%)

Query: 3   KGNVFMSCALEEA-QNAALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +   +M  ALE A + A   +  P VGA+ V   +II    +         AHAE+ AI 
Sbjct: 5   EHTFYMQRALELALRGAGRVSPNPMVGALLVQEGEIIGEGWHERYGE----AHAEVNAI- 59

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
               + ++  L E  LYVTLEPC        C+  I   +I R+  G  +P       G 
Sbjct: 60  --AAVTNEAWLREATLYVTLEPCSHFGKTPPCSDLIIAKQIPRVVVGCRDPFPAVAGRGI 117

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
                A      E+  G+ E    Q  + F K
Sbjct: 118 AKLRAAG----IEVIEGVLEAECLQSNEAFIK 145


>gi|197283994|ref|YP_002149866.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase and
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Proteus mirabilis HI4320]
 gi|194681481|emb|CAR40325.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase and
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Proteus mirabilis HI4320]
          Length = 385

 Score =  116 bits (293), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 39/155 (25%), Positives = 58/155 (37%), Gaps = 21/155 (13%)

Query: 3   KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
               +M  A+E A       +  P VG V V   KII    + +        HAE+ A+ 
Sbjct: 17  NDETYMRRAIELAALGRFTTSPNPNVGCVIVKEGKIIGEGYHHHAGG----PHAEVNALN 72

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           M       E      +YVTLEPC        CA A+  A ++R+     +P       G 
Sbjct: 73  MAG-----ENAKGATVYVTLEPCSHFGKTPPCADALINAGVKRVVAAMQDPNPQVAGRGL 127

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
                A      ++  G+  Q + ++   FFK  R
Sbjct: 128 HKLVAAG----IDVSHGVLMQEAEKLNIGFFKRMR 158


>gi|89894408|ref|YP_517895.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Desulfitobacterium hafniense Y51]
 gi|89333856|dbj|BAE83451.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Desulfitobacterium hafniense Y51]
          Length = 372

 Score =  116 bits (293), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 44/155 (28%), Positives = 64/155 (41%), Gaps = 21/155 (13%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           M+  N +MS ALE A  A  R    P VG V V +  I+    ++    K  T HAE+ A
Sbjct: 8   MELDNHYMSRALELAALAMGRTSPNPLVGCVIVKDGVIVGEGYHQ----KAGTPHAEVHA 63

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
           ++        E       YVTLEPC        CA A+  A I+R+     +P       
Sbjct: 64  LQAAG-----EHARGATAYVTLEPCSHFGKTPPCADALIKAGIQRVVVAMVDPNPLVSGQ 118

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
           G      A      ++  G+ E+ +R + + F K 
Sbjct: 119 GITRLRAAG----IQVDVGLKEKEARTLNKGFLKA 149


>gi|254820531|ref|ZP_05225532.1| cytidine/deoxycytidylate deaminase [Mycobacterium intracellulare
           ATCC 13950]
          Length = 166

 Score =  116 bits (293), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 30/94 (31%), Positives = 44/94 (46%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           F    +E A+        P   V V   ++++ + NR  +  D TAHAEILAIR  C  L
Sbjct: 4   FAQRTIELARRNVAEGGRPFATVIVRGGEVLAESANRVAQTNDPTAHAEILAIREACVKL 63

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
             E L +  +YV   PC MC  ++     R + +
Sbjct: 64  GTEHLVDTTIYVLAHPCPMCLGSLYYCSPREVVF 97


>gi|310766817|gb|ADP11767.1| Riboflavin biosynthesis protein RibD [Erwinia sp. Ejp617]
          Length = 367

 Score =  116 bits (293), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 38/155 (24%), Positives = 58/155 (37%), Gaps = 21/155 (13%)

Query: 3   KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +  ++M+ ALE A+         P VG V V + +I+    +          HAE+ A+R
Sbjct: 2   RDEIYMARALELARRGRFTTTPNPNVGCVLVRDGQIVGEGYHMRAGE----PHAEVHALR 57

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           M               YVTLEPC        C  A+  A I+R+     +P       G 
Sbjct: 58  MAGEKS-----LGATAYVTLEPCSHHGRTPPCCEALIAAGIKRVVTAMQDPNPQVAGRGL 112

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
                A      E+  G+  Q +  + + F K  R
Sbjct: 113 YRLQQAG----IEVSHGLMMQEAEALNRGFLKRMR 143


>gi|296332262|ref|ZP_06874724.1| fused diaminohydroxyphosphoribosylaminopyrimidine deaminase;
           5-amino-6-(5-phosphoribosylamino) uracil reductase
           [Bacillus subtilis subsp. spizizenii ATCC 6633]
 gi|305674964|ref|YP_003866636.1| fused diaminohydroxyphosphoribosylaminopyrimidine deaminase;
           5-amino-6-(5-phosphoribosylamino) uracil reductase
           [Bacillus subtilis subsp. spizizenii str. W23]
 gi|296150576|gb|EFG91463.1| fused diaminohydroxyphosphoribosylaminopyrimidine deaminase;
           5-amino-6-(5-phosphoribosylamino) uracil reductase
           [Bacillus subtilis subsp. spizizenii ATCC 6633]
 gi|305413208|gb|ADM38327.1| fused diaminohydroxyphosphoribosylaminopyrimidine deaminase;
           5-amino-6-(5-phosphoribosylamino) uracil reductase
           [Bacillus subtilis subsp. spizizenii str. W23]
          Length = 361

 Score =  116 bits (293), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 39/148 (26%), Positives = 60/148 (40%), Gaps = 21/148 (14%)

Query: 5   NVFMSCALEEAQNAALRNE-IP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
             +M  AL+ A+    + E  P VGAV V + +I+    +         AHAE+ AI M 
Sbjct: 3   EYYMKLALDLAKQGEGQTESNPLVGAVVVKDGQIVGMGAHLKYGE----AHAEVHAIHMA 58

Query: 63  CRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116
                       D+YVTLEPC        CA  I  + I+R++    +P       G   
Sbjct: 59  G-----SHAKGADIYVTLEPCSHYGKTPPCAELIINSGIKRVFVAMRDPNPLVAGRGISM 113

Query: 117 YTLATCHHSPEIYPGISEQRSRQIIQDF 144
              A      E+  GI   ++ ++ + F
Sbjct: 114 IEKAG----IEVKEGILADQAEKLNEKF 137


>gi|254303903|ref|ZP_04971261.1| diaminohydroxyphosphoribosylaminopyrimidine/5-amino-6-(5-
           phosphoribosylamino)uracil reductase [Fusobacterium
           nucleatum subsp. polymorphum ATCC 10953]
 gi|148324095|gb|EDK89345.1| diaminohydroxyphosphoribosylaminopyrimidine/5-amino-6-(5-
           phosphoribosylamino)uracil reductase [Fusobacterium
           nucleatum subsp. polymorphum ATCC 10953]
          Length = 369

 Score =  116 bits (293), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 40/153 (26%), Positives = 60/153 (39%), Gaps = 25/153 (16%)

Query: 4   GNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
              +M+ A+E AQ       +   P VGAV V + KII    ++         HAE+ A+
Sbjct: 6   DEKYMARAIELAQKG--IGGVNPNPLVGAVVVKDGKIIGEGWHKKFGG----PHAEVWAL 59

Query: 60  RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113
                    E      +YVTLEPC        CA  I  A I+R      +P       G
Sbjct: 60  NEAG-----ENAEGATIYVTLEPCSHQGKTPPCARRIVEAGIKRCVVACIDPNPLVAGKG 114

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
            +    A      +I  G+ E+ ++ + + F K
Sbjct: 115 MKIIEEAG----IDIKLGVLEKEAKDVNKIFLK 143


>gi|150388845|ref|YP_001318894.1| riboflavin biosynthesis protein RibD [Alkaliphilus metalliredigens
           QYMF]
 gi|149948707|gb|ABR47235.1| riboflavin biosynthesis protein RibD [Alkaliphilus metalliredigens
           QYMF]
          Length = 366

 Score =  116 bits (293), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 38/149 (25%), Positives = 56/149 (37%), Gaps = 21/149 (14%)

Query: 4   GNVFMSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
            N +M  A+E A+         P VGAV V NNK+I    +          HAE+ A   
Sbjct: 2   HNQYMRKAIELAKKGTGHTNPNPLVGAVIVKNNKVIGEGYHHYYGG----PHAEVDAFNN 57

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
                  E +    +YVTLEPC        CA AI    I ++     +P      NG  
Sbjct: 58  A-----TEDVKGATMYVTLEPCSHYGKTPPCAKAIVEKGIAQVVIAMRDPNPLVAGNGIG 112

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDF 144
               +      E+   + E  ++ + + F
Sbjct: 113 ILRESG----IEVISEVLESEAKNLNEIF 137


>gi|109706863|gb|ABG43006.1| cytosine deaminase [Candida glabrata]
          Length = 155

 Score =  116 bits (293), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 34/143 (23%), Positives = 57/143 (39%), Gaps = 11/143 (7%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M  A EEA        +P+G   +   +  ++ R  N   +    T H EI  +    R+
Sbjct: 12  MKIAYEEAAKGFEEGGVPIGGCLINNKDGTVLGRGHNMRFQKGSPTLHGEISTLENCGRL 71

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
              ++  +  LY TL PC MC  AI L  I R   G S+        G ++         
Sbjct: 72  EG-KVYKDTTLYTTLSPCDMCTGAILLYGIPRCVIGESDNFK---SPGEEYLKSRG---- 123

Query: 126 PEIYPGISEQRSRQIIQDFFKER 148
            E+   ++++  + I++ F   R
Sbjct: 124 VEVVQ-MNDEPCKAIMKKFIDTR 145


>gi|242043474|ref|XP_002459608.1| hypothetical protein SORBIDRAFT_02g007460 [Sorghum bicolor]
 gi|241922985|gb|EER96129.1| hypothetical protein SORBIDRAFT_02g007460 [Sorghum bicolor]
          Length = 186

 Score =  116 bits (293), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 40/112 (35%), Positives = 61/112 (54%), Gaps = 1/112 (0%)

Query: 2   KKGNVFMSCALEEAQNAALRNEI-PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
            + + F++ A+EEA       +  P GAV V N++++    N   +  D TAHAE+ AIR
Sbjct: 29  DRDHKFLTKAVEEAYRGVDNGDGGPFGAVVVRNDEVVVSCHNMVLKHTDPTAHAEVTAIR 88

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN 112
             C+ L +  L + ++Y + EPC MC  A+ L+RI+RL YGA       I  
Sbjct: 89  EACKKLGKIELSDCEIYASCEPCPMCFGAVHLSRIKRLVYGAKAEAAIAIGF 140


>gi|256842978|ref|ZP_05548466.1| riboflavin biosynthesis protein RibD [Lactobacillus crispatus
           125-2-CHN]
 gi|256848647|ref|ZP_05554081.1| riboflavin biosynthesis protein [Lactobacillus crispatus MV-1A-US]
 gi|262045946|ref|ZP_06018910.1| riboflavin biosynthesis protein RibD [Lactobacillus crispatus
           MV-3A-US]
 gi|293381447|ref|ZP_06627444.1| riboflavin biosynthesis protein RibD [Lactobacillus crispatus
           214-1]
 gi|256614398|gb|EEU19599.1| riboflavin biosynthesis protein RibD [Lactobacillus crispatus
           125-2-CHN]
 gi|256714186|gb|EEU29173.1| riboflavin biosynthesis protein [Lactobacillus crispatus MV-1A-US]
 gi|260573905|gb|EEX30461.1| riboflavin biosynthesis protein RibD [Lactobacillus crispatus
           MV-3A-US]
 gi|290921994|gb|EFD98999.1| riboflavin biosynthesis protein RibD [Lactobacillus crispatus
           214-1]
          Length = 353

 Score =  116 bits (292), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 37/152 (24%), Positives = 64/152 (42%), Gaps = 21/152 (13%)

Query: 2   KKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
                +M  A++EA+       + P VGAV V +  I++   +          HAE  AI
Sbjct: 3   NSDEAYMQLAIQEAKKGLYQTWKNPMVGAVIVKDGNILATGHHIRYGYY----HAERDAI 58

Query: 60  RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113
                 L+ E L    LYVTLEPC        C+  I  ++I+R+     +P       G
Sbjct: 59  ----SKLTPEQLFNSTLYVTLEPCSHYGKQPPCSDLIVSSKIKRVVIAQVDPHQLVTGKG 114

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
                     H+ ++  G+ E +++++ + F+
Sbjct: 115 IAKLRQ----HNIQVTVGVLEDQAKKLNK-FY 141


>gi|255994555|ref|ZP_05427690.1| riboflavin biosynthesis protein RibD [Eubacterium saphenum ATCC
           49989]
 gi|255993268|gb|EEU03357.1| riboflavin biosynthesis protein RibD [Eubacterium saphenum ATCC
           49989]
          Length = 368

 Score =  116 bits (292), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 46/154 (29%), Positives = 69/154 (44%), Gaps = 18/154 (11%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           +K    +MS ALE A+         P VGAV V N +II +  +     K  +AHAE+ A
Sbjct: 6   IKDKEKYMSMALELAEKGLGTTSPNPMVGAVIVKNGEIIGKGFH----KKAGSAHAEVEA 61

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
           ++          +   D+YVTLEPC        C+  +   +I R++ G  +P       
Sbjct: 62  VQDA--HSKDYDIEGADMYVTLEPCSHKGRTPACSDLLIKEKIGRVFIGMRDPNPLVNGG 119

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
           G +    A      E+  GI E+R RQ+ + F K
Sbjct: 120 GIEKLEGALI--KCEV--GILEERCRQLNKVFLK 149


>gi|227877508|ref|ZP_03995573.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Lactobacillus crispatus JV-V01]
 gi|227862901|gb|EEJ70355.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Lactobacillus crispatus JV-V01]
          Length = 356

 Score =  116 bits (292), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 37/152 (24%), Positives = 64/152 (42%), Gaps = 21/152 (13%)

Query: 2   KKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
                +M  A++EA+       + P VGAV V +  I++   +          HAE  AI
Sbjct: 6   NSDEAYMQLAIQEAKKGLYQTWKNPMVGAVIVKDGNILATGHHIRYGYY----HAERDAI 61

Query: 60  RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113
                 L+ E L    LYVTLEPC        C+  I  ++I+R+     +P       G
Sbjct: 62  ----SKLTPEQLFNSTLYVTLEPCSHYGKQPPCSDLIVSSKIKRVVIAQVDPHQLVTGKG 117

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
                     H+ ++  G+ E +++++ + F+
Sbjct: 118 IAKLRQ----HNIQVTVGVLEDQAKKLNK-FY 144


>gi|320120555|gb|EFE28957.2| riboflavin biosynthesis protein RibD [Filifactor alocis ATCC 35896]
          Length = 364

 Score =  116 bits (292), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 41/155 (26%), Positives = 61/155 (39%), Gaps = 25/155 (16%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56
           M     +M  A+E A+       +   P VGAV V ++ II    +          HAE 
Sbjct: 1   MVFHETYMKTAIELAKKG--EGYVSPNPLVGAVIVKDDIIIGSGYHTKYGGL----HAER 54

Query: 57  LAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGI 110
            A++  CR           +YVTLEPC        CA AI  + I  +Y G+S+P     
Sbjct: 55  EALKN-CRTSP----KGASMYVTLEPCSHYGKQPPCALAIIESGIDTVYIGSSDPNPEVN 109

Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
             G Q    A      ++  G+ ++    +   FF
Sbjct: 110 GKGIQVLRDAN----IKVVTGLLKEECDSLNTFFF 140


>gi|110802102|ref|YP_697858.1| riboflavin biosynthesis protein RibD [Clostridium perfringens
           SM101]
 gi|110682603|gb|ABG85973.1| riboflavin biosynthesis protein RibD [Clostridium perfringens
           SM101]
          Length = 365

 Score =  116 bits (292), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 40/149 (26%), Positives = 56/149 (37%), Gaps = 21/149 (14%)

Query: 4   GNVFMSCALEEAQNAAL-RNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
              FM  ALE A+      N  P VGAV V   +II    +          HAEI AI  
Sbjct: 2   DEFFMKKALELARKGEGYVNPNPLVGAVIVKGGEIIGEGYHEFFGGD----HAEINAINS 57

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
             +           +YVTLEPC        C  AI   + + +  G  +P      NG +
Sbjct: 58  SVKST-----EGATIYVTLEPCCHYGKTPPCVEAIIKNKFKTVVVGTLDPNPLVSGNGIK 112

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDF 144
               A      E+  G+ E+   ++ + F
Sbjct: 113 ILREAG----IEVKVGVLEKECIRLNEIF 137


>gi|183984819|ref|YP_001853110.1| deaminase [Mycobacterium marinum M]
 gi|183178145|gb|ACC43255.1| deaminase [Mycobacterium marinum M]
          Length = 166

 Score =  116 bits (292), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 28/94 (29%), Positives = 43/94 (45%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           F   A++ A+        P   V V + ++++ + N+  +  D TAHAEILAIR  C  L
Sbjct: 4   FAQRAIDLARQNVAEGGRPFATVIVKDGQVLAESANKVAQTNDPTAHAEILAIRAACTKL 63

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
             E L     YV   PC MC  ++       + +
Sbjct: 64  GTEQLFGTTFYVLAHPCPMCLGSLYYCSPDEVIF 97


>gi|154250091|ref|YP_001410916.1| riboflavin biosynthesis protein RibD [Fervidobacterium nodosum
           Rt17-B1]
 gi|154154027|gb|ABS61259.1| riboflavin biosynthesis protein RibD [Fervidobacterium nodosum
           Rt17-B1]
          Length = 365

 Score =  116 bits (292), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 39/153 (25%), Positives = 63/153 (41%), Gaps = 19/153 (12%)

Query: 2   KKGNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
           K    FM  A+  A+     +    PVGAV V + KI+S   ++         HAE  AI
Sbjct: 8   KVHERFMKLAIVIAKKGIGFVNPNPPVGAVIVKDGKILSMGYHKYYGGY----HAERDAI 63

Query: 60  RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113
                      +    +YVTLEPC        C   I  + I+ +Y   ++P      NG
Sbjct: 64  LSALNA--GIDISGSTMYVTLEPCDHYGKTPPCTDLIIQSGIKEVYIACTDPNP-ISGNG 120

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
            +           +++ G+ E+ +R++ + FFK
Sbjct: 121 AEKLRKNG----VDVHIGLLEEEARELAKFFFK 149


>gi|223939370|ref|ZP_03631249.1| riboflavin biosynthesis protein RibD [bacterium Ellin514]
 gi|223891974|gb|EEF58456.1| riboflavin biosynthesis protein RibD [bacterium Ellin514]
          Length = 365

 Score =  116 bits (292), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 37/145 (25%), Positives = 58/145 (40%), Gaps = 18/145 (12%)

Query: 8   MSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M  AL  A+ A       P VGAV V + K+I R  +          HAE+ A++     
Sbjct: 1   MQNALALARRAYGNTSPNPLVGAVLVKHGKVIGRGWHHRAGQ----PHAEVEALKDAASK 56

Query: 66  LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
            +        LYVTLEPC        C  AI  A+I+++   A++P              
Sbjct: 57  GNDP--KGATLYVTLEPCCTHGRTPPCTEAIKAAKIKKVVVAATDPNPAHAGRAFPLLER 114

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDF 144
           A      ++  GI  + + ++ + F
Sbjct: 115 AG----IKVVSGILAEEAGELNESF 135


>gi|307262983|ref|ZP_07544605.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Actinobacillus
           pleuropneumoniae serovar 13 str. N273]
 gi|306871609|gb|EFN03331.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Actinobacillus
           pleuropneumoniae serovar 13 str. N273]
          Length = 364

 Score =  116 bits (292), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 35/151 (23%), Positives = 58/151 (38%), Gaps = 21/151 (13%)

Query: 3   KGNVFMSCALEEAQNAAL-RNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
               +M  A+  A+      N  P VG V V N +I++   +          HAE  A+ 
Sbjct: 2   TDLDYMRRAIALAKQGLGWTNPNPLVGCVIVKNGEIVAEGYHEKIGG----WHAERNAV- 56

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
               +  +E L     YVTLEPC        C+  +    I++++ G+S+P       G 
Sbjct: 57  ----LHCKEDLSGATAYVTLEPCCHHGRTPPCSDLLIERGIKKVFIGSSDPNPLVAGRGA 112

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
                A      E+  G+ ++    +   FF
Sbjct: 113 NQLRQAG----VEVVEGLLKEECDALNPIFF 139


>gi|29349136|ref|NP_812639.1| riboflavin biosynthesis protein ribD [Bacteroides thetaiotaomicron
           VPI-5482]
 gi|29341044|gb|AAO78833.1| riboflavin biosynthesis protein ribD [Bacteroides thetaiotaomicron
           VPI-5482]
          Length = 339

 Score =  116 bits (292), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 41/145 (28%), Positives = 59/145 (40%), Gaps = 19/145 (13%)

Query: 8   MSCALEEAQNAALR--NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M   +E A+N          VGAV V +  II    +         AHAE+ AIR    +
Sbjct: 1   MRRCIELAKNGLCNVAPNPMVGAVIVCDGLIIGEGYHIRCGE----AHAEVNAIRS---V 53

Query: 66  LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
             + +L    +YV+LEPC        CA  I   +I R+  G  +P       G Q    
Sbjct: 54  KDKSLLSRSTIYVSLEPCSHYGKTPPCADLIIEKQIPRIVIGCQDPFSQVAGRGIQKLRD 113

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDF 144
           A      E+  G+ E+  R +I+ F
Sbjct: 114 AGR----EVTVGVLEKECRYLIRRF 134


>gi|326793810|ref|YP_004311630.1| riboflavin biosynthesis protein RibD [Marinomonas mediterranea
           MMB-1]
 gi|326544574|gb|ADZ89794.1| riboflavin biosynthesis protein RibD [Marinomonas mediterranea
           MMB-1]
          Length = 383

 Score =  116 bits (292), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 38/157 (24%), Positives = 58/157 (36%), Gaps = 21/157 (13%)

Query: 1   MKKGNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           M+K   +MS A++ A+           VG V V +++II    +          HAE+ A
Sbjct: 5   MQKHTEYMSQAVQLAKKGLYTTHPNPRVGCVIVKDDRIIGEGFHARAGEG----HAEVNA 60

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
           +         E +     YVTLEPC        CA A+  A I  + YG  +P       
Sbjct: 61  LASAM-----ESVEGATAYVTLEPCSHQGKTPPCADALIKAGIAVVVYGMQDPNPQVAGR 115

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
           G      A      ++   + E    ++   F K  R
Sbjct: 116 GLAKLEKAG----VQVIGPVLENECERLNLGFNKRMR 148


>gi|222082119|ref|YP_002541484.1| hypothetical protein Arad_8671 [Agrobacterium radiobacter K84]
 gi|221726798|gb|ACM29887.1| conserved hypothetical protein [Agrobacterium radiobacter K84]
          Length = 158

 Score =  116 bits (292), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 34/150 (22%), Positives = 56/150 (37%), Gaps = 14/150 (9%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRM 61
              VF+  + E A  A L    P GA+ V  +  ++    N     +D+T HAE + +  
Sbjct: 6   NDEVFLRRSFEVAARARLNGNHPFGAILVGPDGTVLMEQENAYNPTQDMTGHAERVLMTR 65

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
             +  S   L +  +Y + EPC MCA A   A + R+ YG S  +   I          T
Sbjct: 66  ASQQYSPGFLVQCAMYTSAEPCAMCAGAAYWAGVGRVVYGLSESQLKAITG--NHPENPT 123

Query: 122 CH-----------HSPEIYPGISEQRSRQI 140
                           E+   +  + +  +
Sbjct: 124 LDLPCRVVFEAGQRKVEVVGPMLCEEATAL 153


>gi|187608406|ref|NP_001119919.1| hypothetical protein LOC791769 [Danio rerio]
 gi|169145700|emb|CAQ15728.1| novel protein similar to vertebrate tRNA-specific adenosine
           deaminase 3 (ADAT3) [Danio rerio]
          Length = 336

 Score =  116 bits (292), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 42/172 (24%), Positives = 67/172 (38%), Gaps = 32/172 (18%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAI 59
            K   +M  A++ A++        VGAV V     +II+ A +  R       HA ++ I
Sbjct: 167 TKMREYMCVAVKAAKSGRELGMDAVGAVIVDPKTEQIIAVAHDCKRGSH-PLHHAVMVCI 225

Query: 60  RM----------------GCRILSQ------------EILPEVDLYVTLEPCTMCAAAIS 91
            +                 CR                 I    DLYVT EPC MCA A+ 
Sbjct: 226 DLVACGQDGGAYKYEKYPACRFSCSNSVCDGKETGLPYICTGYDLYVTREPCVMCAMALV 285

Query: 92  LARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQD 143
            +RI R++YGAS    G   +  + +     +H  E++ G+       + ++
Sbjct: 286 HSRISRVFYGASTAD-GAFGSRYKIHCQKDLNHRFEVFKGVMVNACEDLCKE 336


>gi|22204218|emb|CAD43470.1| novel protein [Danio rerio]
          Length = 336

 Score =  116 bits (292), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 42/172 (24%), Positives = 67/172 (38%), Gaps = 32/172 (18%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAI 59
            K   +M  A++ A++        VGAV V     +II+ A +  R       HA ++ I
Sbjct: 167 TKMREYMCVAVKAAKSGRELGMDAVGAVIVDPKTEQIIAVAHDCKRGSH-PLHHAVMVCI 225

Query: 60  RM----------------GCRILSQ------------EILPEVDLYVTLEPCTMCAAAIS 91
            +                 CR                 I    DLYVT EPC MCA A+ 
Sbjct: 226 DLVACGQDGGAYNYEKYPACRFSCSNSVCDGKETGLPYICTGYDLYVTREPCVMCAMALV 285

Query: 92  LARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQD 143
            +RI R++YGAS    G   +  + +     +H  E++ G+       + ++
Sbjct: 286 HSRISRVFYGASTAD-GAFGSRYKIHCQKDLNHRFEVFKGVMVNACEDLCKE 336


>gi|325528019|gb|EGD05243.1| cytidine/deoxycytidylate deaminase [Burkholderia sp. TJI49]
          Length = 155

 Score =  116 bits (292), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 29/94 (30%), Positives = 48/94 (51%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           F+   ++ A         P   V V + +I++ + N   + +D TAHAEILA+R  CR L
Sbjct: 3   FVKRTIDLAMKNVEEGGRPFATVIVRDGEIVAESPNLVAQTRDPTAHAEILAVRDACRRL 62

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
             E L + ++Y+   PC MC  ++     +R+ Y
Sbjct: 63  GTEHLTDCEIYILASPCPMCLGSLYYCSPKRVVY 96


>gi|315224801|ref|ZP_07866622.1| riboflavin biosynthesis protein RibD [Capnocytophaga ochracea
           F0287]
 gi|314945204|gb|EFS97232.1| riboflavin biosynthesis protein RibD [Capnocytophaga ochracea
           F0287]
          Length = 331

 Score =  116 bits (292), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 39/150 (26%), Positives = 63/150 (42%), Gaps = 19/150 (12%)

Query: 4   GNVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
              +M   ++ A N          VG+V V   +II    ++        AHAE+ AI  
Sbjct: 9   DEWYMHRCIQLAYNGLGSTYPNPMVGSVIVYEGRIIGEGWHQKAGE----AHAEVRAITS 64

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
              +  + +LP+  +YV+LEPC        CA  I   +I R+  G ++P       G +
Sbjct: 65  ---VKDKSLLPKSTIYVSLEPCCHFGKTPPCADLIIAHKIGRVVIGTTDPFAKVHGKGIE 121

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
               A C    E+  G+ E   R++ + FF
Sbjct: 122 KLRNAGC----EVTVGVCEAECRELNKRFF 147


>gi|326519634|dbj|BAK00190.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 154

 Score =  116 bits (292), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 44/115 (38%), Positives = 65/115 (56%), Gaps = 1/115 (0%)

Query: 2   KKGNVFMSCALEEAQNAALRN-EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
            + + F+S A+EEA  A  R    P GAV V N+K++    N   +  D TAHAE+ AIR
Sbjct: 9   DREHKFLSIAVEEAYRAVDRGHGRPFGAVVVRNDKVVVSCHNMVVKNTDATAHAEVTAIR 68

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
             C+ L +  L + ++Y + EPC MC  A+ L+RI+RL YGA+      + +  Q
Sbjct: 69  EACKKLGKTDLSDCEMYASCEPCPMCFGAVRLSRIKRLVYGATAEAAIAMGSCYQ 123


>gi|321311800|ref|YP_004204087.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino) uracil
           reductase [Bacillus subtilis BSn5]
 gi|320018074|gb|ADV93060.1| fused diaminohydroxyphosphoribosylaminopyrimidine deaminase;
           5-amino-6-(5-phosphoribosylamino) uracil reductase
           [Bacillus subtilis BSn5]
          Length = 361

 Score =  116 bits (292), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 39/148 (26%), Positives = 60/148 (40%), Gaps = 21/148 (14%)

Query: 5   NVFMSCALEEAQNAALRNE-IP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
             +M  AL+ A+    + E  P VGAV V + +I+    +         AHAE+ AI M 
Sbjct: 3   EYYMKLALDLAKQGEGQTESNPLVGAVVVKDGQIVGMGAHLKYGE----AHAEVHAIHMA 58

Query: 63  CRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116
                       D+YVTLEPC        CA  I  + I+R++    +P       G   
Sbjct: 59  GAHA-----EGADIYVTLEPCSHYGKTPPCAELIINSGIKRVFVAMRDPNPLVAGRGISM 113

Query: 117 YTLATCHHSPEIYPGISEQRSRQIIQDF 144
              A      E+  GI   ++ ++ + F
Sbjct: 114 IKEAG----IEVREGILADQAERLNEKF 137


>gi|255641124|gb|ACU20840.1| unknown [Glycine max]
          Length = 168

 Score =  116 bits (292), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 43/112 (38%), Positives = 62/112 (55%), Gaps = 1/112 (0%)

Query: 2   KKGNVFMSCALEEAQNAALRNEI-PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
            + + F++ A+EEA       +  P GAV VLN++++    N      D TAHAE+ AIR
Sbjct: 36  DRDHKFLTKAVEEAYKGVECGDGGPFGAVVVLNDEVVVSCHNMVLRNTDPTAHAEVTAIR 95

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN 112
             C+ L+Q  L + ++Y + EPC MC  AI L+RI+RL YGA       I  
Sbjct: 96  EACQKLNQIELADCEIYASCEPCPMCFGAIHLSRIKRLVYGAKAEAAIAIGF 147


>gi|240171878|ref|ZP_04750537.1| deaminase [Mycobacterium kansasii ATCC 12478]
          Length = 166

 Score =  116 bits (292), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 28/94 (29%), Positives = 43/94 (45%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           F    ++ A+        P   V V + +I++ + N+  +  D TAHAEILAIR  C  L
Sbjct: 4   FAQRTIDLARQNVAEGGRPFATVIVKDGEILAESANKVAQTNDPTAHAEILAIREACTKL 63

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
             E L    +YV   PC MC  ++       + +
Sbjct: 64  GTEHLVGTTIYVLAHPCPMCLGSLYYCSPDEVVF 97


>gi|294648973|ref|ZP_06726421.1| riboflavin biosynthesis protein RibD [Acinetobacter haemolyticus
           ATCC 19194]
 gi|292825108|gb|EFF83863.1| riboflavin biosynthesis protein RibD [Acinetobacter haemolyticus
           ATCC 19194]
          Length = 366

 Score =  116 bits (291), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 35/155 (22%), Positives = 63/155 (40%), Gaps = 21/155 (13%)

Query: 1   MKKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           + +   +M  A++ A+         P VG V V + +I+    +     K    HAE+ A
Sbjct: 9   LSQAQYWMQRAIDLARLGQYSTKPNPNVGCVIVKDGQILGEGFH----PKAGQPHAEVFA 64

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
           +R        E   +  +YVTLEPC        CA A+  A+++++    S+P       
Sbjct: 65  LRQAG-----ENAKDATVYVTLEPCAHYGRTPPCAEALVKAQVKKVVIACSDPNPLVAGK 119

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
           G +    A      E+  G+  + ++ +   F K 
Sbjct: 120 GVKILQDAG----IEVETGVCTENAKGLNLGFLKA 150


>gi|30021491|ref|NP_833122.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Bacillus
           cereus ATCC 14579]
 gi|29897046|gb|AAP10323.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase [Bacillus
           cereus ATCC 14579]
          Length = 302

 Score =  116 bits (291), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 44/153 (28%), Positives = 67/153 (43%), Gaps = 23/153 (15%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57
           M +  ++M  ALE A  A      P   VG+V V +N+I+    +          HAEI 
Sbjct: 1   MLEHELYMKLALENA-KAMKGQTTPNPLVGSVIVNDNRIVGVGAHMKAGE----PHAEIH 55

Query: 58  AIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIE 111
           AIRM       E +    +YVTLEPC+       CA AI  A I+++     +P      
Sbjct: 56  AIRMAG-----EQVRGATIYVTLEPCSHHGRTGPCAEAIVQAGIKKVVVATLDPNPLVSG 110

Query: 112 NGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
            G +    A      E+  G+ E+ S+++ + F
Sbjct: 111 RGIKILQDAG----IEVLVGVCEEESKKMNEVF 139


>gi|116669980|ref|YP_830913.1| CMP/dCMP deaminase, zinc-binding [Arthrobacter sp. FB24]
 gi|116610089|gb|ABK02813.1| CMP/dCMP deaminase, zinc-binding protein [Arthrobacter sp. FB24]
          Length = 161

 Score =  116 bits (291), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 32/96 (33%), Positives = 44/96 (45%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
             F+  A++ A         P GA+ V  +       NR     D TAHAE++AIR    
Sbjct: 11  QKFLGQAVDLAVQNVAAGGGPFGALVVTADGTRHFGVNRVTRDNDPTAHAEVVAIRTAAA 70

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
             +   L    LY + EPC +C AA   ARI R+Y+
Sbjct: 71  ESANFDLSGAVLYASCEPCPLCLAAALWARIDRVYF 106


>gi|153834818|ref|ZP_01987485.1| riboflavin biosynthesis protein RibD [Vibrio harveyi HY01]
 gi|148868746|gb|EDL67820.1| riboflavin biosynthesis protein RibD [Vibrio harveyi HY01]
          Length = 374

 Score =  116 bits (291), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 37/153 (24%), Positives = 56/153 (36%), Gaps = 21/153 (13%)

Query: 2   KKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
            +    MS AL  A+         P VG V V + +I+    +          HAE+ A+
Sbjct: 12  SQDFEMMSRALMLAKRGIYTTAPNPNVGCVIVRDGEIVGEGHHHRAGE----PHAEVHAM 67

Query: 60  RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113
           RM               YVTLEPC        CA  +  A++ R+     +P       G
Sbjct: 68  RMAGDKTQ-----GATAYVTLEPCSHYGRTPPCAEGLIEAKVARVVCAMEDPNPKVAGRG 122

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
            Q    A      E+  G+ E  + ++ + F K
Sbjct: 123 FQMLRDAG----VEVQVGLLESEAIELNKGFIK 151


>gi|52627172|ref|NP_001005300.1| tRNA-specific adenosine deaminase-like protein 3 [Danio rerio]
 gi|147742915|sp|Q8JFW4|ADAT3_DANRE RecName: Full=tRNA-specific adenosine deaminase-like protein 3;
           AltName: Full=tRNA-specific adenosine-34 deaminase
           subunit adat3
 gi|22204386|emb|CAD43442.1| SI:dZ72B14.5 (novel protein) [Danio rerio]
 gi|55250228|gb|AAH85551.1| Si:dkey-204g5.2 [Danio rerio]
          Length = 336

 Score =  116 bits (291), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 42/172 (24%), Positives = 67/172 (38%), Gaps = 32/172 (18%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAI 59
            K   +M  A++ A++        VGAV V     +II+ A +  R       HA ++ I
Sbjct: 167 TKMREYMCVAVKAAKSGRELGMDAVGAVIVDPKTEQIIAVAHDCKRGSH-PLHHAVMVCI 225

Query: 60  RM----------------GCRILSQ------------EILPEVDLYVTLEPCTMCAAAIS 91
            +                 CR                 I    DLYVT EPC MCA A+ 
Sbjct: 226 DLVACGQDGGAYNYEKYPACRFSCSNSVCDGKETGLPYICTGYDLYVTREPCVMCAMALV 285

Query: 92  LARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQD 143
            +RI R++YGAS    G   +  + +     +H  E++ G+       + ++
Sbjct: 286 HSRISRVFYGASTAD-GAFGSRYKIHCQKDLNHRFEVFKGVMVNACEDLCKE 336


>gi|291522092|emb|CBK80385.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase
           /5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Coprococcus catus GD/7]
          Length = 371

 Score =  116 bits (291), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 35/153 (22%), Positives = 62/153 (40%), Gaps = 20/153 (13%)

Query: 2   KKGNVFMSCALEEAQ--NAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
           ++   +M  AL+ A+           VGAV V + ++I++  +          HAE+ A 
Sbjct: 6   QEDLRYMQMALDMAKLGRGYTNPNPMVGAVIVKDGQVIAKGYHHCCGQG----HAEVEAF 61

Query: 60  RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113
           +        + +    +YVTLEPC        CA  I   +I R+  GA +P       G
Sbjct: 62  KDA----GNQDVTGATIYVTLEPCSHYGKTPPCADKIIEKKIGRVVVGALDPNPLVAGRG 117

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
            +       +   E+  G+  + S ++ + F K
Sbjct: 118 IEKIR----NAGIEVTTGVLAEESIKLNEIFMK 146


>gi|126651196|ref|ZP_01723406.1| Guanine deaminase [Bacillus sp. B14905]
 gi|126592034|gb|EAZ86100.1| Guanine deaminase [Bacillus sp. B14905]
          Length = 152

 Score =  116 bits (291), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 37/147 (25%), Positives = 63/147 (42%), Gaps = 14/147 (9%)

Query: 7   FMSCALEEAQNAALRN-EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           ++  A+++ ++   +N   P GA  V  ++II+  GN      D+TAHAEI+AIR   + 
Sbjct: 3   YIQLAVDKTKDGIDQNIGGPFGATIVRGDEIIAVVGNTMMRDTDITAHAEIVAIREASKK 62

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL------ 119
           L    L +  +Y T EPC MC +AI  + I+ ++Y  +                      
Sbjct: 63  LGTMDLSDCVIYATCEPCPMCVSAIIWSGIKEVHYCNTAEDAHVHGFSDMHIRDYLTGKD 122

Query: 120 -ATCH-HSPEIYPGISEQRSRQIIQDF 144
            +  + H  E  P    +    +   F
Sbjct: 123 KSVLNMHKME-TP----EECDALFHHF 144


>gi|327479375|gb|AEA82685.1| riboflavin biosynthesis protein RibD [Pseudomonas stutzeri DSM
           4166]
          Length = 366

 Score =  116 bits (291), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 37/155 (23%), Positives = 59/155 (38%), Gaps = 21/155 (13%)

Query: 1   MKKGNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           M   + +M+ AL+ A+           VG V V + +++    +          HAE+ A
Sbjct: 1   MTTDHAWMARALQLARKGLYSTHPNPRVGCVIVADGELVGEGWHVRAGE----PHAEVHA 56

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
           +R        E       YVTLEPC        CA A+  A + R+     +P      N
Sbjct: 57  LRQAG-----ERARGATAYVTLEPCSHYGRTPPCAEALVKAGVGRVVAAMQDPNPQVAGN 111

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
           G +    A      E+  G+ E  +R++   F K 
Sbjct: 112 GLERLRSAG----IEVASGVLEGEARELNAGFTKR 142


>gi|162461371|ref|NP_001105964.1| cytidine deaminase2 [Zea mays]
 gi|119394647|gb|ABL74485.1| putative cytidine deaminase [Zea mays]
 gi|119394649|gb|ABL74486.1| putative cytidine deaminase [Zea mays]
          Length = 186

 Score =  116 bits (291), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 40/112 (35%), Positives = 61/112 (54%), Gaps = 1/112 (0%)

Query: 2   KKGNVFMSCALEEAQNAALRNEI-PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
            + + F++ A+EEA       +  P GAV V N++++    N   +  D TAHAE+ AIR
Sbjct: 29  DRDHKFLTKAVEEAYRGVDCGDGGPFGAVVVCNDEVVVSCHNMVLKHTDPTAHAEVTAIR 88

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN 112
             C+ L +  L + ++Y + EPC MC  A+ L+RI+RL YGA       I  
Sbjct: 89  EACKKLGKIELSDCEIYASCEPCPMCFGAVHLSRIKRLVYGAKAEAAIAIGF 140


>gi|291484757|dbj|BAI85832.1| riboflavin-specific deaminase [Bacillus subtilis subsp. natto
           BEST195]
          Length = 361

 Score =  116 bits (291), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 39/148 (26%), Positives = 59/148 (39%), Gaps = 21/148 (14%)

Query: 5   NVFMSCALEEAQNAALRNE-IP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
             +M  AL+ A+    + E  P VGAV V + +I+    +         AHAE+ AI M 
Sbjct: 3   EYYMKLALDLAKQGEGQTESNPLVGAVVVKDGQIVGMGAHLKYGE----AHAEVHAIHMA 58

Query: 63  CRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116
                       D+YVTLEPC        CA  I  + I+R++    +P       G   
Sbjct: 59  GAHA-----EGADIYVTLEPCSHYGKTPPCAELIINSGIKRVFVAMRDPNPLVAGRGISM 113

Query: 117 YTLATCHHSPEIYPGISEQRSRQIIQDF 144
              A      E+  GI   ++  + + F
Sbjct: 114 IKEAG----IEVREGILADQAESLNEKF 137


>gi|302521124|ref|ZP_07273466.1| cytidine/deoxycytidine deaminase [Streptomyces sp. SPB78]
 gi|302430019|gb|EFL01835.1| cytidine/deoxycytidine deaminase [Streptomyces sp. SPB78]
          Length = 151

 Score =  116 bits (291), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 31/144 (21%), Positives = 56/144 (38%), Gaps = 13/144 (9%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIR 60
           ++   ++  A+EEA+       +P+GA     +  ++ R  NR  +  D ++H E  A R
Sbjct: 5   EQAQEWLRPAIEEARQGLAEGGVPIGAALYGADGTLLGRGHNRRVQDADPSSHGETDAFR 64

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              R  +        +  TL PC  C+  I    I R+  G S    GG      +    
Sbjct: 65  KAGRQRT---YRGTTMVTTLSPCWYCSGLIKQFGITRVVIGESTTFKGG----EDWLEEQ 117

Query: 121 TCHHSPEIYPGISEQRSRQIIQDF 144
                 EI   +++     ++ +F
Sbjct: 118 G----VEIIR-LTDPECVDLMTEF 136


>gi|237739215|ref|ZP_04569696.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase
           [Fusobacterium sp. 2_1_31]
 gi|229423815|gb|EEO38862.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase
           [Fusobacterium sp. 2_1_31]
          Length = 369

 Score =  116 bits (291), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 42/158 (26%), Positives = 62/158 (39%), Gaps = 27/158 (17%)

Query: 1   MKK--GNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHA 54
           M K     FM+ A+E A        +   P VGAV V + KII    ++         HA
Sbjct: 1   MDKTVDKKFMARAIELAFRGL--GGVNPNPLVGAVVVKDGKIIGEGWHKKYGG----PHA 54

Query: 55  EILAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGG 108
           E+ A+         E      +YVTLEPC        CA  I  A I+R      +P   
Sbjct: 55  EVWALNEAG-----EEAKGATIYVTLEPCSHQGKTPPCAKRIVEAGIKRCVIACIDPNPL 109

Query: 109 GIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
               G +    A      ++  GI E+ ++++ + F K
Sbjct: 110 VAGKGIKIIEDAG----IKVDLGILEKEAKEVNKVFLK 143


>gi|83754218|pdb|2B3Z|A Chain A, Crystal Structure Of A Bifunctional Deaminase And
           Reductase Involved In Riboflavin Biosynthesis
 gi|83754219|pdb|2B3Z|B Chain B, Crystal Structure Of A Bifunctional Deaminase And
           Reductase Involved In Riboflavin Biosynthesis
 gi|83754220|pdb|2B3Z|C Chain C, Crystal Structure Of A Bifunctional Deaminase And
           Reductase Involved In Riboflavin Biosynthesis
 gi|83754221|pdb|2B3Z|D Chain D, Crystal Structure Of A Bifunctional Deaminase And
           Reductase Involved In Riboflavin Biosynthesis
 gi|83754933|pdb|2D5N|A Chain A, Crystal Structure Of A Bifunctional Deaminase And
           Reductase Involved In Riboflavin Biosynthesis
 gi|83754934|pdb|2D5N|B Chain B, Crystal Structure Of A Bifunctional Deaminase And
           Reductase Involved In Riboflavin Biosynthesis
 gi|83754935|pdb|2D5N|C Chain C, Crystal Structure Of A Bifunctional Deaminase And
           Reductase Involved In Riboflavin Biosynthesis
 gi|83754936|pdb|2D5N|D Chain D, Crystal Structure Of A Bifunctional Deaminase And
           Reductase Involved In Riboflavin Biosynthesis
 gi|211939446|pdb|3EX8|A Chain A, Complex Structure Of Bacillus Subtilis Ribg Reduction
           Mechanism In Riboflavin Biosynthesis
 gi|211939447|pdb|3EX8|B Chain B, Complex Structure Of Bacillus Subtilis Ribg Reduction
           Mechanism In Riboflavin Biosynthesis
 gi|211939448|pdb|3EX8|C Chain C, Complex Structure Of Bacillus Subtilis Ribg Reduction
           Mechanism In Riboflavin Biosynthesis
 gi|211939449|pdb|3EX8|D Chain D, Complex Structure Of Bacillus Subtilis Ribg Reduction
           Mechanism In Riboflavin Biosynthesis
          Length = 373

 Score =  116 bits (291), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 39/148 (26%), Positives = 60/148 (40%), Gaps = 21/148 (14%)

Query: 5   NVFMSCALEEAQNAALRNE-IP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
             +M  AL+ A+    + E  P VGAV V + +I+    +         AHAE+ AI M 
Sbjct: 15  EYYMKLALDLAKQGEGQTESNPLVGAVVVKDGQIVGMGAHLKYGE----AHAEVHAIHMA 70

Query: 63  CRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116
                       D+YVTLEPC        CA  I  + I+R++    +P       G   
Sbjct: 71  GAHA-----EGADIYVTLEPCSHYGKTPPCAELIINSGIKRVFVAMRDPNPLVAGRGISM 125

Query: 117 YTLATCHHSPEIYPGISEQRSRQIIQDF 144
              A      E+  GI   ++ ++ + F
Sbjct: 126 MKEAG----IEVREGILADQAERLNEKF 149


>gi|16079385|ref|NP_390209.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino) uracil
           reductase [Bacillus subtilis subsp. subtilis str. 168]
 gi|221310245|ref|ZP_03592092.1| riboflavin-specific deaminase [Bacillus subtilis subsp. subtilis
           str. 168]
 gi|221314569|ref|ZP_03596374.1| riboflavin-specific deaminase [Bacillus subtilis subsp. subtilis
           str. NCIB 3610]
 gi|221319491|ref|ZP_03600785.1| riboflavin-specific deaminase [Bacillus subtilis subsp. subtilis
           str. JH642]
 gi|221323767|ref|ZP_03605061.1| riboflavin-specific deaminase [Bacillus subtilis subsp. subtilis
           str. SMY]
 gi|132565|sp|P17618|RIBD_BACSU RecName: Full=Riboflavin biosynthesis protein RibD; Includes:
           RecName:
           Full=Diaminohydroxyphosphoribosylaminopyrimidine
           deaminase; Short=DRAP deaminase; AltName:
           Full=Riboflavin-specific deaminase; Includes: RecName:
           Full=5-amino-6-(5-phosphoribosylamino)uracil reductase;
           AltName: Full=HTP reductase
 gi|40085|emb|CAA35878.1| unnamed protein product [Bacillus subtilis]
 gi|410125|gb|AAA67481.1| ribG [Bacillus subtilis subsp. subtilis str. 168]
 gi|2634763|emb|CAB14260.1| fused diaminohydroxyphosphoribosylaminopyrimidine deaminase;
           5-amino-6-(5-phosphoribosylamino) uracil reductase
           [Bacillus subtilis subsp. subtilis str. 168]
 gi|34873545|gb|AAQ83285.1| RibG [Cloning vector pRFN4]
          Length = 361

 Score =  116 bits (291), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 39/148 (26%), Positives = 60/148 (40%), Gaps = 21/148 (14%)

Query: 5   NVFMSCALEEAQNAALRNE-IP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
             +M  AL+ A+    + E  P VGAV V + +I+    +         AHAE+ AI M 
Sbjct: 3   EYYMKLALDLAKQGEGQTESNPLVGAVVVKDGQIVGMGAHLKYGE----AHAEVHAIHMA 58

Query: 63  CRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116
                       D+YVTLEPC        CA  I  + I+R++    +P       G   
Sbjct: 59  GAHA-----EGADIYVTLEPCSHYGKTPPCAELIINSGIKRVFVAMRDPNPLVAGRGISM 113

Query: 117 YTLATCHHSPEIYPGISEQRSRQIIQDF 144
              A      E+  GI   ++ ++ + F
Sbjct: 114 MKEAG----IEVREGILADQAERLNEKF 137


>gi|219668833|ref|YP_002459268.1| riboflavin biosynthesis protein RibD [Desulfitobacterium hafniense
           DCB-2]
 gi|219539093|gb|ACL20832.1| riboflavin biosynthesis protein RibD [Desulfitobacterium hafniense
           DCB-2]
          Length = 365

 Score =  116 bits (291), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 44/155 (28%), Positives = 64/155 (41%), Gaps = 21/155 (13%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           M+  N +MS ALE A  A  R    P VG V V +  I+    ++    K  T HAE+ A
Sbjct: 1   MELDNHYMSRALELAALAMGRTSPNPLVGCVIVKDGAIVGEGYHQ----KAGTPHAEVHA 56

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
           ++        E       YVTLEPC        CA A+  A I+R+     +P       
Sbjct: 57  LQAAG-----EHARGATAYVTLEPCSHFGKTPPCADALIKAGIQRVVVAMVDPNPLVGGQ 111

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
           G      A      ++  G+ E+ +R + + F K 
Sbjct: 112 GITRLRAAG----IQVDVGLKEKEARTLNKGFLKA 142


>gi|311899518|dbj|BAJ31926.1| putative cytosine deaminase [Kitasatospora setae KM-6054]
          Length = 153

 Score =  116 bits (291), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 31/150 (20%), Positives = 52/150 (34%), Gaps = 25/150 (16%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIR 60
           ++   ++  AL EA+       IP+GA     + +++ R  NR  +  D + HAE  A R
Sbjct: 8   EQARAWLDVALAEAETGLAEGGIPIGAALFRRDGELLGRGHNRRVQDGDPSMHAETSAFR 67

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG------IENGT 114
              R+       +  +  TL PC  C+  +    I  +  G S    GG         G 
Sbjct: 68  AAGRLRG---YRDTVMVTTLSPCWYCSGLVRQFGIGHVVIGESTTFTGGHDWLATHGTGI 124

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
                                   +++ DF
Sbjct: 125 TLLDDPR---------------CVRLMTDF 139


>gi|115471365|ref|NP_001059281.1| Os07g0245100 [Oryza sativa Japonica Group]
 gi|113610817|dbj|BAF21195.1| Os07g0245100 [Oryza sativa Japonica Group]
          Length = 186

 Score =  116 bits (291), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 40/112 (35%), Positives = 61/112 (54%), Gaps = 1/112 (0%)

Query: 2   KKGNVFMSCALEEAQNAALRNEI-PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
            + + F++ A+EEA       +  P GAV V N++++    N   +  D TAHAE+ AIR
Sbjct: 29  DRDHKFLTKAVEEAYRGVDCGDGGPFGAVVVRNDEVVVSCHNMVLKHTDPTAHAEVTAIR 88

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN 112
             C+ L +  L + ++Y + EPC MC  A+ L+RI+RL YGA       I  
Sbjct: 89  EACKKLGKIELSDCEIYASCEPCPMCFGAVHLSRIKRLVYGAKAEAAIAIGF 140


>gi|51246206|ref|YP_066090.1| cytosine deaminase [Desulfotalea psychrophila LSv54]
 gi|50877243|emb|CAG37083.1| probable cytosine deaminase [Desulfotalea psychrophila LSv54]
          Length = 145

 Score =  116 bits (291), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 32/104 (30%), Positives = 52/104 (50%), Gaps = 1/104 (0%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           + F + A+ EA+       IP+G+V V++ +I+ R  N+  +   V  HAE+  +    R
Sbjct: 2   DKFFAVAVAEARKGMATGGIPIGSVLVIDGQIVGRGHNQRVQRGSVVLHAEMDCLENAGR 61

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGG 108
           I + +      LY TL PC MC+ A+ L  I R+  G +    G
Sbjct: 62  IKAADY-RRATLYSTLSPCDMCSGAVLLYGIPRVVIGENRTFCG 104


>gi|218232159|ref|YP_002368101.1| riboflavin biosynthesis protein RibD [Bacillus cereus B4264]
 gi|218160116|gb|ACK60108.1| riboflavin biosynthesis protein RibD [Bacillus cereus B4264]
          Length = 367

 Score =  116 bits (291), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 44/153 (28%), Positives = 67/153 (43%), Gaps = 23/153 (15%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57
           M +  ++M  ALE A  A      P   VG+V V +N+I+    +         +HAEI 
Sbjct: 1   MLEHELYMKLALENA-KAMKGQTTPNPLVGSVIVNDNRIVGVGAHMKAGE----SHAEIH 55

Query: 58  AIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIE 111
           AIRM       E      +YVTLEPC+       CA AI  A I+++     +P      
Sbjct: 56  AIRMAG-----EQARGGTIYVTLEPCSHHGRTGPCAEAIVQAGIKKVVVATLDPNPLVSG 110

Query: 112 NGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
            G +    A      E+  G+ E+ S+++ + F
Sbjct: 111 RGIKILQDAG----IEVLVGVCEEESKKMNEVF 139


>gi|218778327|ref|YP_002429645.1| CMP/dCMP deaminase zinc-binding [Desulfatibacillum alkenivorans
           AK-01]
 gi|218759711|gb|ACL02177.1| CMP/dCMP deaminase zinc-binding [Desulfatibacillum alkenivorans
           AK-01]
          Length = 169

 Score =  116 bits (291), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 42/150 (28%), Positives = 67/150 (44%), Gaps = 8/150 (5%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTA---HAEILAI 59
               FM+ ALE A+ A    E PVG + V + ++I++   R       T    HAE++A+
Sbjct: 2   DHMQFMNKALELARQALEAGEFPVGCILVHDGRVIAQGA-RVGVAGGGTGELEHAEMVAM 60

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
                + +     EV +Y T+EPC MC  A+ +  I ++ Y   +  GGG        TL
Sbjct: 61  ARFENMENAPPPSEVTIYCTMEPCLMCFGALMIHGITKIVYAYEDAMGGG--TALDRSTL 118

Query: 120 ATCHHS--PEIYPGISEQRSRQIIQDFFKE 147
              +     EI P +   +S  + + FF  
Sbjct: 119 PPLYRDAEVEITPHVGRSQSLALFKAFFSR 148


>gi|323965096|gb|EGB60555.1| riboflavin biosynthesis protein RibD [Escherichia coli M863]
 gi|327254735|gb|EGE66351.1| riboflavin biosynthesis protein RibD [Escherichia coli STEC_7v]
          Length = 367

 Score =  115 bits (290), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 36/155 (23%), Positives = 58/155 (37%), Gaps = 21/155 (13%)

Query: 3   KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +   +M+ AL+ AQ      +  P VG V V + +I+    ++         HAE+ A+R
Sbjct: 2   QDEYYMARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGE----PHAEVHALR 57

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           M               YVTLEPC        C  A+  A + R+     +P       G 
Sbjct: 58  MAGEKA-----KGATAYVTLEPCSHHGRTPPCCDALIAAGVTRVVAAMQDPNPQVAGRGL 112

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
                A      ++  G+    + Q+ + F K  R
Sbjct: 113 YRLQQAG----IDVSHGLMMSEAEQLNKGFLKRMR 143


>gi|291518541|emb|CBK73762.1| riboflavin biosynthesis protein RibD [Butyrivibrio fibrisolvens
           16/4]
          Length = 257

 Score =  115 bits (290), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 40/150 (26%), Positives = 59/150 (39%), Gaps = 18/150 (12%)

Query: 3   KGNVFMSCALEEAQN-AALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +   +M  ALE A+  A   N  P VGAV V +  II    +          HAE  A++
Sbjct: 2   EDKTYMLRALELAKLGAGFVNPNPMVGAVIVKDGVIIGEGYHEKYGQL----HAERNALK 57

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
             CR    +      +YVTLEPC        C  AI  +RI R+  G  +        G 
Sbjct: 58  D-CRERGNDP-AGATMYVTLEPCCHYGKTPPCTEAIVESRINRVVIGTLDVNPVVAGKGA 115

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
                    H   +  G+ E+  +++ + F
Sbjct: 116 DILRE----HGIRVEVGLLEKECKKLNRVF 141


>gi|300718994|ref|YP_003743797.1| Cytidine/deoxycytidylate deaminase [Erwinia billingiae Eb661]
 gi|299064830|emb|CAX61950.1| Cytidine/deoxycytidylate deaminase [Erwinia billingiae Eb661]
          Length = 157

 Score =  115 bits (290), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 30/94 (31%), Positives = 48/94 (51%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           F+   +E A         P   V V N +I++ + N+  +  D TAHAEILAIR  C+ L
Sbjct: 3   FVKRTIELAMQNVEEGGRPFATVIVRNGEIVAESANKAAQSHDPTAHAEILAIREACKKL 62

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
             E L + ++Y+   PC MC  ++     +++ Y
Sbjct: 63  QTENLSDCEIYILASPCPMCLGSLYYCSPKQVIY 96


>gi|189219256|ref|YP_001939897.1| Cytosine/adenosine deaminase [Methylacidiphilum infernorum V4]
 gi|189186114|gb|ACD83299.1| Cytosine/adenosine deaminase [Methylacidiphilum infernorum V4]
          Length = 146

 Score =  115 bits (290), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 38/142 (26%), Positives = 62/142 (43%), Gaps = 10/142 (7%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           + F   A EEA+       IP+GA     ++++ R  NR  +L  V  H E+  +    R
Sbjct: 2   DPFWHIAFEEAKIGFEEGGIPIGACLAYKDRVLGRGRNRRVQLGSVIKHGELDCLENA-R 60

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
             + +I  E  LY TL PC MC+ AI L  I+++  G +    G  E   Q        +
Sbjct: 61  RYTAKIYREAILYTTLSPCWMCSGAILLYGIKKVVIGENRNFKGPEEILIQ--------N 112

Query: 125 SPEIYPGISEQRSRQIIQDFFK 146
             EI   + ++   +++  F  
Sbjct: 113 GVEII-HLDDEECTRLLSSFIA 133


>gi|149179738|ref|ZP_01858243.1| riboflavin biosynthesis protein RibD [Bacillus sp. SG-1]
 gi|148851930|gb|EDL66075.1| riboflavin biosynthesis protein RibD [Bacillus sp. SG-1]
          Length = 363

 Score =  115 bits (290), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 39/153 (25%), Positives = 62/153 (40%), Gaps = 22/153 (14%)

Query: 1   MKKGNVFMSCALEEAQ--NAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           M++   +M  AL  A+           VGAV V + +I+    +   +  D   HAE+ A
Sbjct: 1   MQEQE-YMKLALSLAKAGKGQTAPNPAVGAVVVKDGEIVGMGAHL--KAGDP--HAEVHA 55

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
           IR              D+YVTLEPC        CA  I   +++R++  + +P       
Sbjct: 56  IRQAGSKA-----EGADIYVTLEPCAHTGKTPPCANLIVENKLKRVFIASVDPNPLVAGK 110

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
           G      A      E+  GI E+ + ++   FF
Sbjct: 111 GIDILERAG----IEVVTGICEKEALELNAHFF 139


>gi|303249744|ref|ZP_07335948.1| riboflavin biosynthesis protein [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
 gi|307251932|ref|ZP_07533833.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Actinobacillus
           pleuropneumoniae serovar 6 str. Femo]
 gi|302651311|gb|EFL81463.1| riboflavin biosynthesis protein [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
 gi|306860624|gb|EFM92636.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Actinobacillus
           pleuropneumoniae serovar 6 str. Femo]
          Length = 364

 Score =  115 bits (290), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 35/151 (23%), Positives = 58/151 (38%), Gaps = 21/151 (13%)

Query: 3   KGNVFMSCALEEAQNAAL-RNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
               +M  A+  A+      N  P VG V V N +I++   +          HAE  A+ 
Sbjct: 2   TDLDYMRRAIALAKQGLGWTNPNPLVGCVIVKNGEIVAEGYHEKIGG----WHAERNAV- 56

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
               +  +E L     YVTLEPC        C+  +    I++++ G+S+P       G 
Sbjct: 57  ----LHCKEDLSGATAYVTLEPCCHHGRTPPCSNLLIERGIKKVFIGSSDPNPLVAGRGA 112

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
                A      E+  G+ ++    +   FF
Sbjct: 113 NQLRQAG----VEVVEGLLKEECDALNPIFF 139


>gi|307249603|ref|ZP_07531590.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Actinobacillus
           pleuropneumoniae serovar 4 str. M62]
 gi|306858458|gb|EFM90527.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Actinobacillus
           pleuropneumoniae serovar 4 str. M62]
          Length = 364

 Score =  115 bits (290), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 35/151 (23%), Positives = 58/151 (38%), Gaps = 21/151 (13%)

Query: 3   KGNVFMSCALEEAQNAAL-RNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
               +M  A+  A+      N  P VG V V N +I++   +          HAE  A+ 
Sbjct: 2   TDLDYMRRAIALAKQGLGWTNPNPLVGCVIVKNGEIVAEGYHEKIGG----WHAERNAV- 56

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
               +  +E L     YVTLEPC        C+  +    I++++ G+S+P       G 
Sbjct: 57  ----LHCKEDLSGATAYVTLEPCCHHGRTPPCSNLLIERGIKKVFIGSSDPNPLVAGRGA 112

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
                A      E+  G+ ++    +   FF
Sbjct: 113 NQLRQAG----VEVVEGLLKEECDALNPIFF 139


>gi|237749273|ref|ZP_04579753.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Oxalobacter
           formigenes OXCC13]
 gi|229380635|gb|EEO30726.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Oxalobacter
           formigenes OXCC13]
          Length = 363

 Score =  115 bits (290), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 38/152 (25%), Positives = 59/152 (38%), Gaps = 18/152 (11%)

Query: 1   MKKGNVFMSCALEEAQN-AALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           M     FM  ALE A+  + L +  P VG V V + +II     +         HAE+ A
Sbjct: 1   MADHEKFMRRALELARKCSVLTSPNPRVGCVIVRDGEIIGEGFTQPVGGN----HAEVEA 56

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
           +    +           +YVTLEPC        CA A+  A ++R+     +P       
Sbjct: 57  LNDVAKRGQDCR--GATVYVTLEPCSHRGRTPPCADALIRANVKRVVAAIEDPNVQVAGK 114

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
           G      A      E+  G+    +R++ + F
Sbjct: 115 GLAKLKAAG----IEVLCGVLPDEARELNRGF 142


>gi|323976105|gb|EGB71198.1| riboflavin biosynthesis protein RibD [Escherichia coli TW10509]
          Length = 367

 Score =  115 bits (290), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 36/155 (23%), Positives = 58/155 (37%), Gaps = 21/155 (13%)

Query: 3   KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +   +M+ AL+ AQ      +  P VG V V + +I+    ++         HAE+ A+R
Sbjct: 2   QDEYYMARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGE----PHAEVHALR 57

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           M               YVTLEPC        C  A+  A + R+     +P       G 
Sbjct: 58  MAGEKA-----KGATAYVTLEPCSHHGRTPPCCDALIAAGVTRVVAAMQDPNPQVAGRGL 112

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
                A      ++  G+    + Q+ + F K  R
Sbjct: 113 YRLQQAG----IDVSHGLMMSEAEQLNKGFLKRMR 143


>gi|289577285|ref|YP_003475912.1| riboflavin biosynthesis protein RibD [Thermoanaerobacter italicus
           Ab9]
 gi|289526998|gb|ADD01350.1| riboflavin biosynthesis protein RibD [Thermoanaerobacter italicus
           Ab9]
          Length = 360

 Score =  115 bits (290), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 41/150 (27%), Positives = 64/150 (42%), Gaps = 21/150 (14%)

Query: 5   NVFMSCALEEAQNAAL-RNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
             +M  AL  A+      N  P VGAV V N KII    +          HAE+ A++  
Sbjct: 2   EEYMKRALTLAEKGWGYTNPNPLVGAVIVKNGKIIGEGYHEYFGG----PHAEVNALKNA 57

Query: 63  CRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116
                 E +    ++VTLEPC        C   I  + I+++Y    +P      NG + 
Sbjct: 58  V-----EDVKGSTMFVTLEPCSHYGKTPPCVEEIIKSGIKKVYIAMEDPNPKVSGNGIKR 112

Query: 117 YTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
              A      E++ G+ E+ +R++ + FFK
Sbjct: 113 LKEAG----IEVHVGMMEKEARKLNEIFFK 138


>gi|163803478|ref|ZP_02197350.1| hypothetical protein 1103602000439_AND4_19771 [Vibrio sp. AND4]
 gi|159172738|gb|EDP57587.1| hypothetical protein AND4_19771 [Vibrio sp. AND4]
          Length = 375

 Score =  115 bits (290), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 35/153 (22%), Positives = 57/153 (37%), Gaps = 21/153 (13%)

Query: 2   KKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
            +    MS AL+ A+         P VG V V + +I+    +          HAE+ A+
Sbjct: 13  SQDFEMMSRALKLAKRGIYTTAPNPNVGCVIVRDGEIVGEGHHHRAGE----PHAEVHAM 68

Query: 60  RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113
           RM               YVTLEPC        CA  +  A++ R+     +P       G
Sbjct: 69  RMAGDKTQ-----GATAYVTLEPCSHYGRTPPCAEGLIKAKVARVVCATEDPNPKVAGRG 123

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
            Q    A      ++  G+ +  + ++ + F K
Sbjct: 124 FQMLRDAG----VDVQVGLLQSEAIELNKGFIK 152


>gi|125624336|ref|YP_001032819.1| riboflavin biosynthesis protein RibD [Lactococcus lactis subsp.
           cremoris MG1363]
 gi|44662840|gb|AAS47500.1| riboflavin-specific deaminase/reductase [Lactococcus lactis subsp.
           cremoris NZ9000]
 gi|124493144|emb|CAL98108.1| riboflavin biosynthesis protein RibD [Lactococcus lactis subsp.
           cremoris MG1363]
 gi|300071120|gb|ADJ60520.1| riboflavin biosynthesis protein RibD [Lactococcus lactis subsp.
           cremoris NZ9000]
          Length = 362

 Score =  115 bits (290), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 37/155 (23%), Positives = 62/155 (40%), Gaps = 25/155 (16%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56
           M+    FM+ A+  A+       +   P VGA+ V + +II +  +         AHAEI
Sbjct: 1   MENDEHFMNLAILLARKGG--GNVNPNPQVGAIIVNDGRIIGQGYHEKYGE----AHAEI 54

Query: 57  LAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGI 110
            A          E      +YVTLEPC        C  AI   +++R+  G+ +P     
Sbjct: 55  NAF-----KSCIESPEGSTIYVTLEPCAHQGKQPPCFEAIIKNKVKRVVIGSLDPNPLVA 109

Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
             G +    A      ++   + E+  + + + FF
Sbjct: 110 GKGIEAMKKAG----IDVSLKVLEKECKDLNKIFF 140


>gi|110669248|ref|YP_659059.1| cytosine/adenosine deaminases [Haloquadratum walsbyi DSM 16790]
 gi|109626995|emb|CAJ53471.1| cytosine/adenosine deaminases [Haloquadratum walsbyi DSM 16790]
          Length = 154

 Score =  115 bits (290), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 33/143 (23%), Positives = 57/143 (39%), Gaps = 1/143 (0%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
              + M  AL+ A+ +A R + P G+V V ++ ++ R  N      D+  H E+      
Sbjct: 10  DHEMHMQEALKLARESAARGDEPFGSVLVRDDTVVMRESNHEITESDIRRHPELHLAYRA 69

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGA-SNPKGGGIENGTQFYTLAT 121
           C+    +   E+ +Y T EPC MCA  +  A      Y   S+       N     +   
Sbjct: 70  CQAYDSDERAEMVMYTTTEPCPMCAGGMVTAGFDSTVYSVGSDEIAEFTGNEPSVRSANI 129

Query: 122 CHHSPEIYPGISEQRSRQIIQDF 144
                EI   +     RQ+ +++
Sbjct: 130 LDGITEITGPLLNDEGRQVHEEY 152


>gi|162461226|ref|NP_001105963.1| cytidine deaminase1 [Zea mays]
 gi|119394643|gb|ABL74483.1| putative cytidine deaminase [Zea mays]
 gi|119394645|gb|ABL74484.1| putative cytidine deaminase [Zea mays]
 gi|195654311|gb|ACG46623.1| cytidine/deoxycytidylate deaminase family protein [Zea mays]
          Length = 186

 Score =  115 bits (290), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 40/112 (35%), Positives = 61/112 (54%), Gaps = 1/112 (0%)

Query: 2   KKGNVFMSCALEEAQNAALRNEI-PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
            + + F++ A+EEA       +  P GAV V N++++    N   +  D TAHAE+ AIR
Sbjct: 29  DRDHKFLTKAVEEAYRGVDCGDGGPFGAVVVRNDEVVVSCHNMVLKHTDPTAHAEVTAIR 88

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN 112
             C+ L +  L + ++Y + EPC MC  A+ L+RI+RL YGA       I  
Sbjct: 89  EACKKLGKIELSDCEIYASCEPCPMCFGAVHLSRIKRLVYGAKAEAAIAIGF 140


>gi|302559168|ref|ZP_07311510.1| cytosine deaminase [Streptomyces griseoflavus Tu4000]
 gi|302476786|gb|EFL39879.1| cytosine deaminase [Streptomyces griseoflavus Tu4000]
          Length = 152

 Score =  115 bits (290), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 36/145 (24%), Positives = 56/145 (38%), Gaps = 15/145 (10%)

Query: 6   VFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
            +++ AL EA+       IP+GA     +  ++ R  NR  +  D +AHAE  A R   R
Sbjct: 11  AWLATALAEARAGGDEGGIPIGAALYGADGTLLGRGHNRRVQDGDPSAHAETAAFRAAGR 70

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
             S        +  TL PC  C+  +    I R+  G +    GG              H
Sbjct: 71  QRS---YGGTTMVTTLSPCWYCSGLVRQFGISRVVIGEAATFHGG--------HDWLAAH 119

Query: 125 SPEIYPGISEQ-RSRQIIQDFFKER 148
             EI   + +      +++DF   R
Sbjct: 120 GVEIV--LLDDPECGAMMRDFVARR 142


>gi|254580711|ref|XP_002496341.1| ZYRO0C16148p [Zygosaccharomyces rouxii]
 gi|238939232|emb|CAR27408.1| ZYRO0C16148p [Zygosaccharomyces rouxii]
          Length = 155

 Score =  115 bits (290), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 35/154 (22%), Positives = 62/154 (40%), Gaps = 15/154 (9%)

Query: 1   MKKGNVF----MSCALEEAQNAALRNEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHA 54
           M   + +    M  A EEA      N +P+G   +   + +++ R  N   +    T H 
Sbjct: 1   MDSASRWDGLGMDIAYEEALIGYKENGVPIGGCLIDSRDGRVLGRGHNLRYQKNSATLHG 60

Query: 55  EILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           EI  +   C  L   +     +Y TL PC MC  AI +  I R   G  +      ++  
Sbjct: 61  EISTLEN-CGRLPASVYRHATMYTTLSPCDMCTGAIVMYGIPRCVIGEHDN----FKSPG 115

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKER 148
           + Y  +   H   +   + ++R + +++ F  ER
Sbjct: 116 EVYLESR-GHQVVV---VDDKRCKDLMKKFILER 145


>gi|227818281|ref|YP_002822252.1| cytidine/deoxycytidylate deaminase family protein [Sinorhizobium
           fredii NGR234]
 gi|227337280|gb|ACP21499.1| cytidine/deoxycytidylate deaminase family protein [Sinorhizobium
           fredii NGR234]
          Length = 164

 Score =  115 bits (290), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 32/156 (20%), Positives = 61/156 (39%), Gaps = 11/156 (7%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNR-NRELKDVTAHAEILAIRM 61
               +  A + A+ +    + P G++    +  ++    N  + E  D TAHAE L    
Sbjct: 9   DESLLRKAFDVARRSREGGDHPFGSILADRDGNVLLEQCNGYSSEGGDRTAHAERLLATR 68

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS---------NPKGGGIEN 112
             +    + L E  +Y + EPC MC+ AI  A I R+ +G S         + K     +
Sbjct: 69  AGKSYDLDFLAECTMYTSAEPCAMCSGAIYWAGIGRVVFGLSEREMKQQIGDSKENPTLD 128

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKER 148
                  A      E+   +    + ++ ++++  R
Sbjct: 129 LPCDIVFAAGQRPTEVVGPMLADEAAKLHKEYWSRR 164


>gi|299531573|ref|ZP_07044979.1| CMP/dCMP deaminase, zinc-binding protein [Comamonas testosteroni
           S44]
 gi|298720536|gb|EFI61487.1| CMP/dCMP deaminase, zinc-binding protein [Comamonas testosteroni
           S44]
          Length = 162

 Score =  115 bits (289), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 31/83 (37%), Positives = 51/83 (61%)

Query: 25  PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84
           P GAV V + ++++RA N+  EL D +AHAE+ A+R+G +      L    +Y +  PC+
Sbjct: 31  PFGAVLVRDGQVLARAVNQVDELCDPSAHAEMQALRIGAKAQGSTDLSGAVMYASGYPCS 90

Query: 85  MCAAAISLARIRRLYYGASNPKG 107
           MC  A+ LA ++++Y+  SN  G
Sbjct: 91  MCYTAMLLAGVKQVYFAYSNEDG 113


>gi|301054889|ref|YP_003793100.1| riboflavin biosynthesis protein ribD [Bacillus anthracis CI]
 gi|300377058|gb|ADK05962.1| riboflavin biosynthesis protein ribD [Bacillus cereus biovar
           anthracis str. CI]
          Length = 367

 Score =  115 bits (289), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 44/153 (28%), Positives = 66/153 (43%), Gaps = 23/153 (15%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57
           M +  ++M  ALE A  A      P   VG+V V +N+I+    +          HAEI 
Sbjct: 1   MLEHELYMKLALENA-KAMKGQTTPNPLVGSVIVNDNRIVGIGAHMKAGE----PHAEIH 55

Query: 58  AIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIE 111
           AIRM       E      +YVTLEPC+       CA AI  A I+++     +P      
Sbjct: 56  AIRMAG-----EQARGGTIYVTLEPCSHHGRTGPCAEAIVQAGIKKVVVATLDPNPLVSG 110

Query: 112 NGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
            G +    A      E+  G+ E+ S+++ + F
Sbjct: 111 RGIKILQDAG----IEVLVGVCEEESKKMNEVF 139


>gi|149564876|ref|XP_001516821.1| PREDICTED: similar to hCG22695 [Ornithorhynchus anatinus]
          Length = 373

 Score =  115 bits (289), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 40/184 (21%), Positives = 67/184 (36%), Gaps = 48/184 (26%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLN--NKIISRAGNRNRELKDVTAHAEILAIR 60
           K   +M  A+  A+  A +    VGAV V      +++          +   HA ++ I 
Sbjct: 178 KMQTYMEKAIHTARQGAEKGMKAVGAVVVDPATEDVLAVGH-DCSSASNPLLHATMVCID 236

Query: 61  MGCRILSQ--------------------------------------------EILPEVDL 76
           +  +   +                                             I    DL
Sbjct: 237 LVAQRQGRGAYSFNAFPACTISPSGDRAIPSASKSIQPGVMRKFESRRDGLPYICTGYDL 296

Query: 77  YVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQR 136
           YVT EPC MCA A+  +RI+R++YGAS+P  G +    + ++    +H  E++ GI E  
Sbjct: 297 YVTSEPCVMCAMALLHSRIQRVFYGASSPD-GALGTRYKIHSKEDLNHHFEVFRGILETE 355

Query: 137 SRQI 140
              +
Sbjct: 356 CCSL 359


>gi|187932958|ref|YP_001885493.1| riboflavin biosynthesis protein RibD [Clostridium botulinum B str.
           Eklund 17B]
 gi|187721111|gb|ACD22332.1| riboflavin biosynthesis protein RibD [Clostridium botulinum B str.
           Eklund 17B]
          Length = 378

 Score =  115 bits (289), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 38/151 (25%), Positives = 62/151 (41%), Gaps = 21/151 (13%)

Query: 4   GNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
              +M  ALE A+      N  P VGAV V +N+II    +         AHAE+ AI  
Sbjct: 17  NEEYMDLALELAKKGIGKVNPNPLVGAVIVKDNEIIGTGYHEYYGG----AHAEVDAINN 72

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
                + + L    +Y+TLEPC        C   I   +I+++  G  +P         +
Sbjct: 73  -----TTKSLEGSTIYITLEPCAHYGKTPPCVNLIIEKKIKKVVIGMLDPNPMVSGKSVK 127

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
                      E+  G+ E++ +++ + F K
Sbjct: 128 KLKEND----IEVIVGVEEEKCKKLNESFIK 154


>gi|119394651|gb|ABL74487.1| putative cytidine deaminase [Zea mays]
 gi|119394653|gb|ABL74488.1| putative cytidine deaminase [Zea mays]
          Length = 186

 Score =  115 bits (289), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 40/112 (35%), Positives = 61/112 (54%), Gaps = 1/112 (0%)

Query: 2   KKGNVFMSCALEEAQNAALRNEI-PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
            + + F++ A+EEA       +  P GAV V N++++    N   +  D TAHAE+ AIR
Sbjct: 29  DRDHKFLTKAVEEAYRGVDCGDGGPFGAVVVCNDEVVVSCHNMVLKHTDPTAHAEVTAIR 88

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN 112
             C+ L +  L + ++Y + EPC MC  A+ L+RI+RL YGA       I  
Sbjct: 89  EACKKLGKIELSDCEIYASCEPCPMCFGAVHLSRIKRLVYGAKAEAAIAIGF 140


>gi|253576364|ref|ZP_04853694.1| riboflavin biosynthesis protein RibD [Paenibacillus sp. oral taxon
           786 str. D14]
 gi|251844257|gb|EES72275.1| riboflavin biosynthesis protein RibD [Paenibacillus sp. oral taxon
           786 str. D14]
          Length = 373

 Score =  115 bits (289), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 39/156 (25%), Positives = 64/156 (41%), Gaps = 23/156 (14%)

Query: 1   MK--KGNVFMSCALEEAQNA-ALRNEIPV-GAVAVLNNKIISRAGNRNRELKDVTAHAEI 56
           MK      +M+ AL+ A+ A       PV GAV V +  ++    +    LK  T HAE+
Sbjct: 1   MKVIDDEYYMALALDMAERAQGQTGTNPVVGAVVVKDGALVGLGTH----LKRGTPHAEV 56

Query: 57  LAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGI 110
            A+ M              +YVTLEPC        CA  +   +++R+     +P     
Sbjct: 57  HALNMAGSQA-----EGSTVYVTLEPCSHHGLTPPCAERLIHEKVQRVVVACEDPNPLVA 111

Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
             G +    A      E+  G+  +R+ ++ + F K
Sbjct: 112 GKGIELLRAAG----IEVEVGVLRERALKLNRRFIK 143


>gi|311068845|ref|YP_003973768.1| fused diaminohydroxyphosphoribosylaminopyrimidine deaminase;
           5-amino-6-(5-phosphoribosylamino) uracil reductase
           [Bacillus atrophaeus 1942]
 gi|310869362|gb|ADP32837.1| fused diaminohydroxyphosphoribosylaminopyrimidine deaminase;
           5-amino-6-(5-phosphoribosylamino) uracil reductase
           [Bacillus atrophaeus 1942]
          Length = 363

 Score =  115 bits (289), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 40/148 (27%), Positives = 63/148 (42%), Gaps = 21/148 (14%)

Query: 5   NVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
             +M+ ALE A+         P VGAV V N +I+    +         AHAE+ AI+M 
Sbjct: 3   EYYMNTALELAKQGEGQTGSNPLVGAVVVKNGEIVGMGAHLKYGE----AHAEVHAIKMA 58

Query: 63  CRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116
            +      + + D+YVTLEPC        CA  I  + I+R++    +P       G   
Sbjct: 59  GK-----HVKDADIYVTLEPCSHYGKTPPCAELIITSGIKRVFVAMRDPNPLVAGKGISM 113

Query: 117 YTLATCHHSPEIYPGISEQRSRQIIQDF 144
              A      E+  GI   ++ ++ + F
Sbjct: 114 IKAAG----IEVKEGILTDQAEKLNEKF 137


>gi|221064913|ref|ZP_03541018.1| CMP/dCMP deaminase zinc-binding [Comamonas testosteroni KF-1]
 gi|220709936|gb|EED65304.1| CMP/dCMP deaminase zinc-binding [Comamonas testosteroni KF-1]
          Length = 166

 Score =  115 bits (289), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 40/147 (27%), Positives = 64/147 (43%), Gaps = 14/147 (9%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMG 62
              ++  A+  A  A  R   P GA+ V  + +++++A N N E  D TAHAE+ AIR+ 
Sbjct: 13  DGRYLREAIALADTARERGNRPFGALIVAADGRVLAQASNANGESGDCTAHAELSAIRLA 72

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKG-----------GGIE 111
             + S+  L    LY + EPC MCA AI  + I R+ YG    +                
Sbjct: 73  SPLHSRNELAVATLYSSAEPCVMCAGAIFWSAIGRVVYGIDAERLRVFRGERLDQKDAEL 132

Query: 112 NGTQFYTLATCHHSPEIYPGISEQRSR 138
           +    +  A+  H+ E       + + 
Sbjct: 133 SCRDVFQAAS--HAIECIGPALIEEAS 157


>gi|268611447|ref|ZP_06145174.1| riboflavin biosynthesis protein [Ruminococcus flavefaciens FD-1]
          Length = 373

 Score =  115 bits (289), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 38/151 (25%), Positives = 56/151 (37%), Gaps = 18/151 (11%)

Query: 3   KGNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +   +M  ALE AQ           VGAV V + KII    ++         HAE  A  
Sbjct: 2   QHEDYMRRALELAQRGMGFTSPNPMVGAVIVRDGKIIGEGWHKKYGEL----HAERTAF- 56

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
                 +       D+YVTLEPC        C  A+    I+R++ G+++P       G 
Sbjct: 57  -AYCDENGIDCTGADMYVTLEPCCHHGKQPPCTDAVIEHGIKRVFIGSADPNPMVSGKGV 115

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
           +        H  E+   +  +    I   FF
Sbjct: 116 KILRE----HGIEVTEDVLREECDAINGIFF 142


>gi|118580019|ref|YP_901269.1| riboflavin biosynthesis protein RibD [Pelobacter propionicus DSM
           2379]
 gi|118502729|gb|ABK99211.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Pelobacter
           propionicus DSM 2379]
          Length = 367

 Score =  115 bits (289), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 42/155 (27%), Positives = 63/155 (40%), Gaps = 21/155 (13%)

Query: 1   MKKGNVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           M      M  AL  A+    +      VG V V +  I+    +R    K  T+HAEI A
Sbjct: 1   MTDDIRQMKRALALARRGIGKTSPNPAVGCVIVKDGVIVGTGWHR----KAGTSHAEIHA 56

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
           + M       E     D++VTLEPC        C+ A+  A +RR+  G S+P       
Sbjct: 57  LEMAG-----ESARGADVFVTLEPCCHTGKTPPCSQALIRAGVRRVVAGMSDPNPRVSGG 111

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
           G      A      ++  G+ E+  R + + F K+
Sbjct: 112 GLAELETAG----IQVVCGVLEKECRDLNRPFIKQ 142


>gi|317131626|ref|YP_004090940.1| riboflavin biosynthesis protein RibD [Ethanoligenens harbinense
           YUAN-3]
 gi|315469605|gb|ADU26209.1| riboflavin biosynthesis protein RibD [Ethanoligenens harbinense
           YUAN-3]
          Length = 367

 Score =  115 bits (289), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 41/155 (26%), Positives = 56/155 (36%), Gaps = 21/155 (13%)

Query: 3   KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
               +M  ALE A+      N  P VGAV V + ++I    +R         HAE  A+ 
Sbjct: 2   SDETYMKLALEYAEKGCGWVNPNPMVGAVVVKDGRVIGTGWHRRYGEL----HAERNAL- 56

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
                   E      LYVTLEPC        C  AI  + I R+  G+ +P       G 
Sbjct: 57  ----ASCTEPPQGATLYVTLEPCCHYGKTPPCTDAILESGIHRVVVGSVDPNPLVAGKGI 112

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
           +           E+  G+       I + FF   R
Sbjct: 113 RILRQRG----IEVAEGVLGDACTGINEVFFHFIR 143


>gi|307245212|ref|ZP_07527303.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Actinobacillus
           pleuropneumoniae serovar 1 str. 4074]
 gi|307254158|ref|ZP_07536003.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Actinobacillus
           pleuropneumoniae serovar 9 str. CVJ13261]
 gi|307258621|ref|ZP_07540356.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Actinobacillus
           pleuropneumoniae serovar 11 str. 56153]
 gi|306853856|gb|EFM86070.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Actinobacillus
           pleuropneumoniae serovar 1 str. 4074]
 gi|306862858|gb|EFM94807.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Actinobacillus
           pleuropneumoniae serovar 9 str. CVJ13261]
 gi|306867278|gb|EFM99131.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Actinobacillus
           pleuropneumoniae serovar 11 str. 56153]
          Length = 361

 Score =  115 bits (289), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 36/151 (23%), Positives = 58/151 (38%), Gaps = 21/151 (13%)

Query: 3   KGNVFMSCALEEAQNAAL-RNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
               +M  A+  A+      N  P VG V V N +I++   +          HAE  AI 
Sbjct: 2   TDLDYMRRAIALAKQGLGWTNPNPLVGCVIVKNGEIVAEGYHEKIGG----WHAERNAI- 56

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
               +  +E L     YVTLEPC        C+  +    I++++ G+S+P       G 
Sbjct: 57  ----LHCKEDLFGATAYVTLEPCCHHGRTPPCSDLLIERGIKKVFIGSSDPNPLVAGRGA 112

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
                A      E+  G+ ++    +   FF
Sbjct: 113 GQLRQAG----VEVVEGLLKEECDALNPIFF 139


>gi|170756114|ref|YP_001782503.1| riboflavin biosynthesis protein RibD [Clostridium botulinum B1 str.
           Okra]
 gi|169121326|gb|ACA45162.1| riboflavin biosynthesis protein RibD [Clostridium botulinum B1 str.
           Okra]
          Length = 365

 Score =  115 bits (288), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 41/156 (26%), Positives = 61/156 (39%), Gaps = 25/156 (16%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56
           M+  N  M  AL+ A+      ++   P VGA+ V NNKII    ++         HAE+
Sbjct: 1   MEDYNFHMEKALKLAERG--EGKVNPNPKVGAIVVKNNKIIGEGYHKYFGG----PHAEV 54

Query: 57  LAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGI 110
            A+R               +YVTLEPC        CA +I    I +      +P     
Sbjct: 55  YALREAGEKA-----KGATIYVTLEPCSHYGKTPPCAESIVKMGISKAIIAMKDPNPLVE 109

Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
             G             E+  GI E+ S+++ + F K
Sbjct: 110 GRGIDILKQNG----IEVVTGIMEKESKKLNEVFIK 141


>gi|281210912|gb|EFA85078.1| cytidine deaminase-like protein [Polysphondylium pallidum PN500]
          Length = 499

 Score =  115 bits (288), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 43/182 (23%), Positives = 70/182 (38%), Gaps = 44/182 (24%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLN--NKIISRA-----GNRNRELKDVT------ 51
           N FM  A+E+A         PVGAV V    N I         GN   E+ + T      
Sbjct: 309 NTFMKKAIEQANIGKSLGFNPVGAVLVDPETNTIHGAGFDQTPGNHMNEITNTTTVKYHL 368

Query: 52  ----AHAEILAIRMGCRIL---------------------------SQEILPEVDLYVTL 80
               +H  +  I                                     +  ++ LY+T 
Sbjct: 369 SPILSHCTMNLIHQLANQHIERCVQKSGTAGMPALASMQQTPNSEDDAYLATDLYLYITR 428

Query: 81  EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140
           EPC MC+ A+  +RI+R+ +GA  P  GG+    + +T  + +H  ++Y GI E + + +
Sbjct: 429 EPCIMCSMALVHSRIKRVIFGAVQPNAGGLGGCLKVHTQKSINHRFQVYHGILENQCKLL 488

Query: 141 IQ 142
            +
Sbjct: 489 FE 490


>gi|264677000|ref|YP_003276906.1| CMP/dCMP deaminase, zinc-binding protein [Comamonas testosteroni
           CNB-2]
 gi|262207512|gb|ACY31610.1| CMP/dCMP deaminase, zinc-binding protein [Comamonas testosteroni
           CNB-2]
          Length = 162

 Score =  115 bits (288), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 32/83 (38%), Positives = 51/83 (61%)

Query: 25  PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84
           P GAV V N ++++RA N+  EL D +AHAE+ A+R+G +      L    +Y +  PC+
Sbjct: 31  PFGAVLVRNGQVLARAVNQVDELCDPSAHAEMQALRIGAKAQGSTDLSGAVMYASGYPCS 90

Query: 85  MCAAAISLARIRRLYYGASNPKG 107
           MC  A+ LA ++++Y+  SN  G
Sbjct: 91  MCYTAMLLAGVKQVYFAYSNEDG 113


>gi|219871320|ref|YP_002475695.1| riboflavin biosynthesis protein RibD [Haemophilus parasuis SH0165]
 gi|219691524|gb|ACL32747.1| riboflavin biosynthesis protein RibD [Haemophilus parasuis SH0165]
          Length = 363

 Score =  115 bits (288), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 39/151 (25%), Positives = 59/151 (39%), Gaps = 21/151 (13%)

Query: 3   KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
             ++FM+ A+E A+      N  P VG V V + KII+   ++         HAE  AI 
Sbjct: 2   THSIFMARAIELAELGRGWTNPNPLVGCVIVKDGKIIAEGYHQRYGE----WHAERNAI- 56

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
               +  QE L     YVTLEPC        C+  +    I+ +  G+S+P       G 
Sbjct: 57  ----LHCQEDLSGATAYVTLEPCCHHGWTPPCSDLLIERGIKTVVIGSSDPNPLVAGKGV 112

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
                A      E+   + +     +   FF
Sbjct: 113 AQLRQAG----IEVIENVMKAECDALNPIFF 139


>gi|55379804|ref|YP_137654.1| cytosine deaminase [Haloarcula marismortui ATCC 43049]
 gi|55232529|gb|AAV47948.1| cytosine deaminase [Haloarcula marismortui ATCC 43049]
          Length = 154

 Score =  115 bits (288), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 34/143 (23%), Positives = 57/143 (39%), Gaps = 1/143 (0%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
                +  A E A+ A  R + P G+V V +N+++  A NR     DV  H E+      
Sbjct: 10  DHETHIQRAFELARTAVDRGDRPFGSVLVRDNEVVMEASNRVLTESDVRRHPELQLAHRA 69

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGA-SNPKGGGIENGTQFYTLAT 121
            +    +   E  +Y + EPC MCA  +  A + R+ Y   S+  G    +     +   
Sbjct: 70  MQEFDPDERAETVMYTSTEPCPMCAGGLRYAGLGRVVYSVGSDEMGEFSGHEESVRSGEI 129

Query: 122 CHHSPEIYPGISEQRSRQIIQDF 144
                ++   I  +    I +DF
Sbjct: 130 LAGITDVAGPICHEEGLAIHEDF 152


>gi|157159935|ref|YP_001457253.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Escherichia coli HS]
 gi|157065615|gb|ABV04870.1| riboflavin biosynthesis protein RibD [Escherichia coli HS]
          Length = 367

 Score =  115 bits (288), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 36/155 (23%), Positives = 58/155 (37%), Gaps = 21/155 (13%)

Query: 3   KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +   +M+ AL+ AQ      +  P VG V V + +I+    ++         HAE+ A+R
Sbjct: 2   QDEYYMARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGE----PHAEVHALR 57

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           M               YVTLEPC        C  A+  A + R+     +P       G 
Sbjct: 58  MAGEKA-----KGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVASMQDPNPQVAGRGL 112

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
                A      ++  G+    + Q+ + F K  R
Sbjct: 113 YRLQQAG----IDVSHGLMMSEAEQLNKGFLKRMR 143


>gi|218199364|gb|EEC81791.1| hypothetical protein OsI_25504 [Oryza sativa Indica Group]
 gi|222636744|gb|EEE66876.1| hypothetical protein OsJ_23692 [Oryza sativa Japonica Group]
          Length = 186

 Score =  115 bits (288), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 40/112 (35%), Positives = 61/112 (54%), Gaps = 1/112 (0%)

Query: 2   KKGNVFMSCALEEAQNAALRNEI-PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
            + + F++ A+EEA       +  P GAV V N++++    N   +  D TAHAE+ AIR
Sbjct: 29  DRDHKFLTKAVEEAYRGVDCGDGGPFGAVVVRNDEVVVSCHNMVLKHTDPTAHAEVTAIR 88

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN 112
             C+ L +  L + ++Y + EPC MC  A+ L+RI+RL YGA       I  
Sbjct: 89  EACKKLGKIELSDCEIYASCEPCPMCFGAVHLSRIKRLVYGAKAEAAIAIGF 140


>gi|302833465|ref|XP_002948296.1| hypothetical protein VOLCADRAFT_73641 [Volvox carteri f.
           nagariensis]
 gi|300266516|gb|EFJ50703.1| hypothetical protein VOLCADRAFT_73641 [Volvox carteri f.
           nagariensis]
          Length = 172

 Score =  115 bits (288), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 40/156 (25%), Positives = 69/156 (44%), Gaps = 16/156 (10%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  AL +A +A    E+PVG V V +  ++ R  N   + ++ T HAE++AI        
Sbjct: 1   MCQALAQAHDAWACREVPVGCVVVRDGDVVGRGHNLTNKTRNGTRHAEMIAIDQILAACG 60

Query: 68  ----QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA--- 120
                      DLYVT+EPC MCA A+SL   R++++G  N + GG  +           
Sbjct: 61  GAVQDAAFERCDLYVTVEPCIMCAGALSLLGFRKVFFGCGNDRFGGCGSILPVNQEGCGP 120

Query: 121 ---------TCHHSPEIYPGISEQRSRQIIQDFFKE 147
                              G+  +++ +++++F+  
Sbjct: 121 CARQASAGTHAGRGFPAQGGLFAEQAVELLREFYAA 156


>gi|157156281|ref|YP_001461596.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Escherichia coli E24377A]
 gi|157078311|gb|ABV18019.1| riboflavin biosynthesis protein RibD [Escherichia coli E24377A]
          Length = 367

 Score =  115 bits (288), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 36/155 (23%), Positives = 58/155 (37%), Gaps = 21/155 (13%)

Query: 3   KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +   +M+ AL+ AQ      +  P VG V V + +I+    ++         HAE+ A+R
Sbjct: 2   QDEYYMARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGE----PHAEVHALR 57

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           M               YVTLEPC        C  A+  A + R+     +P       G 
Sbjct: 58  MAGEKA-----KGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVASMQDPNPQVAGRGL 112

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
                A      ++  G+    + Q+ + F K  R
Sbjct: 113 YRLQQAG----IDVSHGLMMSEAEQLNKGFLKRMR 143


>gi|88607630|ref|YP_504671.1| riboflavin biosynthesis protein RibD [Anaplasma phagocytophilum HZ]
 gi|88598693|gb|ABD44163.1| riboflavin biosynthesis protein RibD [Anaplasma phagocytophilum HZ]
          Length = 364

 Score =  115 bits (288), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 36/155 (23%), Positives = 58/155 (37%), Gaps = 25/155 (16%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56
           M     FM+ AL  A+       +   P VG V + +  ++ R             HAEI
Sbjct: 1   MVPDERFMAMALTLARRGL--GNVYPNPAVGCVVIRDGVVVGRGW--TVAGGRP--HAEI 54

Query: 57  LAIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGI 110
           +A++               +YVTLEPC        C +A+  A + R+  G  +P     
Sbjct: 55  VALQNAGN-----RAIGATVYVTLEPCCHDGVTGPCTSALINAGVSRVVIGVQDPDYRVS 109

Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
             G      A      E+  G+ +Q++  +   FF
Sbjct: 110 GKGISSLEAAG----IEVKYGVLQQQAEALNAGFF 140


>gi|152976519|ref|YP_001376036.1| riboflavin biosynthesis protein RibD [Bacillus cereus subsp.
           cytotoxis NVH 391-98]
 gi|152025271|gb|ABS23041.1| riboflavin biosynthesis protein RibD [Bacillus cytotoxicus NVH
           391-98]
          Length = 370

 Score =  115 bits (288), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 41/158 (25%), Positives = 64/158 (40%), Gaps = 24/158 (15%)

Query: 3   KGNVFMSCALEEAQ-NAALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
               +M  AL+ AQ  A   +  P VGAV V N KI+    +     +    HAE+ A+R
Sbjct: 2   TDQEYMKIALQLAQSTAGQTSPNPMVGAVVVKNGKIVGMGAHLRAGEE----HAEVHALR 57

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           M              +YVTLEPC        C   +   +++R+     +       NG 
Sbjct: 58  MAGAHA-----KGATVYVTLEPCSHFGKTPPCCNLLIQKKVKRVVIATLDSNPLVAGNGK 112

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF---KERR 149
           +    A  +    +  GI E+ +R + + FF   K +R
Sbjct: 113 KKLEEAGIY----VTTGILEEEARSLNRYFFHYMKTKR 146


>gi|189485534|ref|YP_001956475.1| riboflavin biosynthesis protein RibD [uncultured Termite group 1
           bacterium phylotype Rs-D17]
 gi|170287493|dbj|BAG14014.1| riboflavin biosynthesis protein RibD [uncultured Termite group 1
           bacterium phylotype Rs-D17]
          Length = 355

 Score =  115 bits (288), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 45/156 (28%), Positives = 70/156 (44%), Gaps = 28/156 (17%)

Query: 3   KGNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
            GN +M  AL+ AQ    +  +   P VG V V +NKI+ R  ++         HAE+ A
Sbjct: 2   NGNKYMQLALDLAQKG--KGRVYTNPLVGCVIVKDNKIVGRGWHQCFGGN----HAEVNA 55

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
           I    +          DLYVTLEPC      T C   I  A I+R+YY   +     +  
Sbjct: 56  IIDAGK-----NAEGADLYVTLEPCNSYGKRTPCTLTIIKAGIKRVYYAVPDSN---VSG 107

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKER 148
           G +           +++ G+ +++SR +I+D+ K  
Sbjct: 108 GREILERNN----IKVHEGLLKKQSRILIKDYLKHL 139


>gi|160872356|ref|ZP_02062488.1| cytosine deaminase (Cytosine aminohydrolase) [Rickettsiella grylli]
 gi|159121155|gb|EDP46493.1| cytosine deaminase (Cytosine aminohydrolase) [Rickettsiella grylli]
          Length = 169

 Score =  115 bits (288), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 36/146 (24%), Positives = 66/146 (45%), Gaps = 9/146 (6%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           KK   F+  A +EA        IP+G++ V+ NK+ ++  N+  +   +  H E   +  
Sbjct: 6   KKEREFLDLAYQEALLGLKEGGIPIGSILVVENKVRAKGRNKRIQEHSMIKHGETDCLEN 65

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
             R +  E L    LY TL PC+MCA AI L +I R+  G +           +   L  
Sbjct: 66  TRRKVLPEDLQRATLYTTLSPCSMCAGAILLHKIPRVIVGEN--------KTFEQSELWL 117

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKE 147
             +  E+   +++++   ++  F ++
Sbjct: 118 KQNQTEVIV-VNQEKCIAMMLSFIRK 142


>gi|333025189|ref|ZP_08453253.1| putative cytidine/deoxycytidine deaminase [Streptomyces sp. Tu6071]
 gi|332745041|gb|EGJ75482.1| putative cytidine/deoxycytidine deaminase [Streptomyces sp. Tu6071]
          Length = 151

 Score =  115 bits (288), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 31/147 (21%), Positives = 58/147 (39%), Gaps = 13/147 (8%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIR 60
           ++   ++  A+EEA+       +P+GA     +  ++ R  NR  +  D ++H E  A R
Sbjct: 5   EQAQEWLRPAVEEARQGLAEGGVPIGAALYGADGTLLGRGHNRRVQDADPSSHGETDAFR 64

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              R  +        +  TL PC  C+  I    I R+  G S    GG      +    
Sbjct: 65  KAGRQRT---YRGTTMVTTLSPCWYCSGLIKQFGITRVVIGESTTFKGG----EDWLEEQ 117

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKE 147
                 EI   +++     ++ +F ++
Sbjct: 118 G----VEIIR-LTDPECVDLMTEFIEK 139


>gi|196248758|ref|ZP_03147458.1| riboflavin biosynthesis protein RibD [Geobacillus sp. G11MC16]
 gi|196211634|gb|EDY06393.1| riboflavin biosynthesis protein RibD [Geobacillus sp. G11MC16]
          Length = 366

 Score =  115 bits (288), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 37/153 (24%), Positives = 59/153 (38%), Gaps = 21/153 (13%)

Query: 1   MKKGNVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           M     +M  AL+ A+    +      VGAV V +  I+    +          HAE+ A
Sbjct: 1   MYNDEHYMRLALDVAKAGVGQTSPNPAVGAVVVNDGTIVGIGAHLKAGE----PHAEVHA 56

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
           IRM              +YVTLEPC        CA  +  A +RR+    ++P       
Sbjct: 57  IRMAGEKA-----RGATVYVTLEPCSHYGKTPPCADLLIEAGVRRVVVATTDPNPLVAGK 111

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
           G      A      ++  GI ++ + ++ + FF
Sbjct: 112 GINKLRRAG----IDVEVGILKEEADELNRMFF 140


>gi|206562263|ref|YP_002233026.1| guanine deaminase [Burkholderia cenocepacia J2315]
 gi|198038303|emb|CAR54258.1| guanine deaminase [Burkholderia cenocepacia J2315]
          Length = 155

 Score =  115 bits (288), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 29/94 (30%), Positives = 47/94 (50%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           F+   ++ A         P   V V + +I++ + N   +  D TAHAEILA+R  CR L
Sbjct: 3   FVKRTIDLAMKNVEEGGRPFATVIVRDGEIVAESPNLVAQTSDPTAHAEILAVRDACRTL 62

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
             E L + ++Y+   PC MC  ++     +R+ Y
Sbjct: 63  GTEHLTDCEIYILASPCPMCLGSLYYCSPKRVIY 96


>gi|145588458|ref|YP_001155055.1| riboflavin biosynthesis protein RibD [Polynucleobacter necessarius
           subsp. asymbioticus QLW-P1DMWA-1]
 gi|145046864|gb|ABP33491.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Polynucleobacter
           necessarius subsp. asymbioticus QLW-P1DMWA-1]
          Length = 371

 Score =  115 bits (288), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 43/152 (28%), Positives = 63/152 (41%), Gaps = 18/152 (11%)

Query: 4   GNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
            + +M  AL EAQ A  L N  P VG V V + ++I R   +        AHAEI AI  
Sbjct: 6   DHQWMGEALGEAQKALYLANPNPRVGCVIVKDGQVIGRGHTQRVGG----AHAEIQAI-- 59

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
                + + +    +YVTLEPC        C  A+ +AR  ++     +P       G  
Sbjct: 60  ADAKANGKDIAGSTIYVTLEPCSHTGRTPPCVNALVVARPAKVIVSMLDPNPLVSGGGLA 119

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
             T A      E+  G+ E  ++ I + F   
Sbjct: 120 RLTDAG----IEVQCGLLESEAQAINRGFISR 147


>gi|331676081|ref|ZP_08376793.1| riboflavin biosynthesis protein RibD [Escherichia coli H591]
 gi|331076139|gb|EGI47421.1| riboflavin biosynthesis protein RibD [Escherichia coli H591]
          Length = 367

 Score =  115 bits (288), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 36/155 (23%), Positives = 58/155 (37%), Gaps = 21/155 (13%)

Query: 3   KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +   +M+ AL+ AQ      +  P VG V V + +I+    ++         HAE+ A+R
Sbjct: 2   QDEYYMARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGE----PHAEVHALR 57

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           M               YVTLEPC        C  A+  A + R+     +P       G 
Sbjct: 58  MAGEKA-----KGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVASMQDPNPQVAGRGL 112

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
                A      ++  G+    + Q+ + F K  R
Sbjct: 113 YRLQQAG----IDVSHGLMMSEAEQLNKGFLKRMR 143


>gi|307256427|ref|ZP_07538209.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Actinobacillus
           pleuropneumoniae serovar 10 str. D13039]
 gi|306865057|gb|EFM96958.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Actinobacillus
           pleuropneumoniae serovar 10 str. D13039]
          Length = 364

 Score =  115 bits (288), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 35/151 (23%), Positives = 58/151 (38%), Gaps = 21/151 (13%)

Query: 3   KGNVFMSCALEEAQNAAL-RNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
               +M  A+  A+      N  P VG V V N +I++   +          HAE  A+ 
Sbjct: 2   TDLDYMRRAIALAKQGLGWTNPNPLVGCVIVKNGEIVAEGYHEKIGG----WHAERNAV- 56

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
               +  +E L     YVTLEPC        C+  +    I++++ G+S+P       G 
Sbjct: 57  ----LHCKEDLSGATAYVTLEPCCHHGRTPPCSDLLIERGIKKVFIGSSDPNPLVAGRGA 112

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
                A      E+  G+ ++    +   FF
Sbjct: 113 GQLRQAG----VEVVEGLLKEECDALNPIFF 139


>gi|299529821|ref|ZP_07043254.1| CMP/dCMP deaminase, zinc-binding protein [Comamonas testosteroni
           S44]
 gi|298722235|gb|EFI63159.1| CMP/dCMP deaminase, zinc-binding protein [Comamonas testosteroni
           S44]
          Length = 146

 Score =  115 bits (288), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 35/136 (25%), Positives = 57/136 (41%), Gaps = 7/136 (5%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  A++ A    L+   P GAV    N++++   N      D + HAE+ AIR G +  +
Sbjct: 1   MRLAVDLAHANRLQGGRPFGAVLAQGNEVVATGVNEIIVSHDPSTHAEMQAIRAGTQKRA 60

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASN----PKGGGIENGTQFYTL---A 120
              L  + +Y +  PC MC AA+ +    ++++   N    P G   E+  Q   L    
Sbjct: 61  NPSLAGLSIYASGHPCPMCLAALVMNGAEQVFFAFDNQDAAPYGLSSESSYQRLRLSLTP 120

Query: 121 TCHHSPEIYPGISEQR 136
                  I  GI   +
Sbjct: 121 QPLPITRIDTGIRAAQ 136


>gi|237747123|ref|ZP_04577603.1| riboflavin biosynthesis protein RibD [Oxalobacter formigenes
           HOxBLS]
 gi|229378474|gb|EEO28565.1| riboflavin biosynthesis protein RibD [Oxalobacter formigenes
           HOxBLS]
          Length = 374

 Score =  115 bits (288), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 42/152 (27%), Positives = 61/152 (40%), Gaps = 18/152 (11%)

Query: 1   MKKGNVFMSCALEEAQN-AALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           + +   FM  ALE A+N + L +  P VG V V N  I+     R         HAEI A
Sbjct: 13  LTEHEFFMKRALELARNCSVLVSPNPKVGCVIVRNGHILGEGYTRPAGKN----HAEIEA 68

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
           +     +   E      +YVTLEPC        CA A+  A + R+     +P       
Sbjct: 69  LNEA--VSRGEDCRGATVYVTLEPCAHFGRTPPCADALVRAGVSRVIAAMEDPNPLVAGK 126

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
           G +    A  H    +  GI    +R++ + F
Sbjct: 127 GLEKLKAAGIH----VICGILADEAREMNRGF 154


>gi|322377269|ref|ZP_08051761.1| riboflavin biosynthesis protein RibD [Streptococcus sp. M334]
 gi|321281982|gb|EFX58990.1| riboflavin biosynthesis protein RibD [Streptococcus sp. M334]
          Length = 366

 Score =  115 bits (288), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 40/150 (26%), Positives = 59/150 (39%), Gaps = 21/150 (14%)

Query: 3   KGNVFMSCALEEAQN-AALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
             + +M  A++ AQ  A   N  P VGAV V +N II +  +          HAE  A++
Sbjct: 2   SDSKYMQLAIKLAQKGAGYVNPNPMVGAVIVKDNHIIGQGYHEFFGG----PHAERNALK 57

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
             CR           LYVTLEPC        C  AI  + I R+  G+ +        G 
Sbjct: 58  N-CRESP----VGATLYVTLEPCCHFGKTPPCIDAIIDSGITRVVIGSLDCNPIVSGKGV 112

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
           +           ++  G+ E     +I+ F
Sbjct: 113 KILEENNL----QVTVGVLENECLNLIKSF 138


>gi|167746303|ref|ZP_02418430.1| hypothetical protein ANACAC_01012 [Anaerostipes caccae DSM 14662]
 gi|167654296|gb|EDR98425.1| hypothetical protein ANACAC_01012 [Anaerostipes caccae DSM 14662]
          Length = 354

 Score =  115 bits (288), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 39/146 (26%), Positives = 58/146 (39%), Gaps = 21/146 (14%)

Query: 8   MSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M  A+E AQ         P VGAV V + ++I    +          HAE  A+      
Sbjct: 1   MRRAIELAQKGTGHTNPNPLVGAVIVKDGQVIGEGFHEAYGGL----HAERNAL-----K 51

Query: 66  LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
              E     +LYVTLEPC        C  A+  + IR++Y G  +P       G +    
Sbjct: 52  SCTEDPKGAELYVTLEPCCHYGKTPPCTEAVIKSGIRKVYVGNVDPNPKVAGMGIKILRE 111

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFF 145
               H  ++  GI ++  R++   FF
Sbjct: 112 ----HGIKVETGILDEECRELNDIFF 133


>gi|191166718|ref|ZP_03028545.1| riboflavin biosynthesis protein RibD [Escherichia coli B7A]
 gi|309794861|ref|ZP_07689282.1| riboflavin biosynthesis protein RibD [Escherichia coli MS 145-7]
 gi|190903229|gb|EDV62951.1| riboflavin biosynthesis protein RibD [Escherichia coli B7A]
 gi|308121514|gb|EFO58776.1| riboflavin biosynthesis protein RibD [Escherichia coli MS 145-7]
 gi|320201655|gb|EFW76231.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-5-phosphoribosylaminouracil
           reductase [Escherichia coli EC4100B]
          Length = 367

 Score =  115 bits (288), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 36/155 (23%), Positives = 58/155 (37%), Gaps = 21/155 (13%)

Query: 3   KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +   +M+ AL+ AQ      +  P VG V V + +I+    ++         HAE+ A+R
Sbjct: 2   QDEYYMARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGE----PHAEVHALR 57

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           M               YVTLEPC        C  A+  A + R+     +P       G 
Sbjct: 58  MAGEKA-----KGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVASMQDPNPQVAGRGL 112

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
                A      ++  G+    + Q+ + F K  R
Sbjct: 113 YRLQQAG----IDVSHGLMMSEAEQLNKGFLKRMR 143


>gi|260771105|ref|ZP_05880032.1| cytosine deaminase [Vibrio furnissii CIP 102972]
 gi|260613702|gb|EEX38894.1| cytosine deaminase [Vibrio furnissii CIP 102972]
          Length = 158

 Score =  115 bits (288), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 37/148 (25%), Positives = 60/148 (40%), Gaps = 14/148 (9%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMG 62
              ++  +   A++A  R   P  AV V  N +I+    N      D+T HAE L +   
Sbjct: 7   DYRWLRHSFALAEDAKSRGIHPFAAVLVDANGEILLEQINGYLPDLDMTGHAERLIMTQA 66

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
            ++   + L +  LYV+ EPC MCA AI  A + R+ YG S  +   +          T 
Sbjct: 67  SKLYRPDFLNQCTLYVSAEPCAMCAGAIYWAGVGRVVYGLSETRLKALTG--NHPENPTL 124

Query: 123 -----------HHSPEIYPGISEQRSRQ 139
                        + E++  + E  + Q
Sbjct: 125 ALPCRIVFESGQRTTEVHGPLLEAEAEQ 152


>gi|294933962|ref|XP_002780922.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
 gi|239891069|gb|EER12717.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
          Length = 294

 Score =  115 bits (288), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 39/124 (31%), Positives = 52/124 (41%), Gaps = 1/124 (0%)

Query: 2   KKGNVFMSCALEEAQNAA-LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           K    FM+ A   A     LR+  P GA  V +   IS A N     KD T HAE+ AIR
Sbjct: 17  KVDECFMTAACMSATAGVILRHGGPFGAAVVRDGMPISCAHNTVLYNKDPTCHAEVNAIR 76

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              R L +  L +  LY + EPC MC  AI  + ++ +Y GA            + +   
Sbjct: 77  HAVRHLGRSELSDCVLYTSCEPCPMCWGAIMASGLKVMYVGADRYCAAKFGFDDKAFYDE 136

Query: 121 TCHH 124
               
Sbjct: 137 FAGP 140



 Score = 51.1 bits (122), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 17/87 (19%), Positives = 27/87 (31%)

Query: 58  AIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFY 117
           AIRM    L    L    +Y + +P      A   ARI +L+Y              Q  
Sbjct: 200 AIRMAALTLGTHELSGCKVYASTQPDVFSHCACLWARISQLFYAERAADESEASYQRQQL 259

Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDF 144
            L           G + +    + + +
Sbjct: 260 ALKAEDRDLMTTWGCAVEECENVFKQW 286


>gi|193068693|ref|ZP_03049654.1| riboflavin biosynthesis protein RibD [Escherichia coli E110019]
 gi|209917627|ref|YP_002291711.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Escherichia coli SE11]
 gi|218552977|ref|YP_002385890.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Escherichia coli IAI1]
 gi|260853634|ref|YP_003227525.1| fused diaminohydroxyphosphoribosylaminopyrimidin e deaminase and
           5-amino-6-(5-phosphoribosylamino) uracil reductase
           [Escherichia coli O26:H11 str. 11368]
 gi|260866572|ref|YP_003232974.1| fused diaminohydroxyphosphoribosylaminopyrimidin e deaminase and
           5-amino-6-(5-phosphoribosylamino) uracil reductase
           [Escherichia coli O111:H- str. 11128]
 gi|293418481|ref|ZP_06660916.1| riboflavin biosynthesis protein RibD [Escherichia coli B088]
 gi|300820347|ref|ZP_07100499.1| riboflavin biosynthesis protein RibD [Escherichia coli MS 119-7]
 gi|300903321|ref|ZP_07121249.1| riboflavin biosynthesis protein RibD [Escherichia coli MS 84-1]
 gi|301301562|ref|ZP_07207697.1| riboflavin biosynthesis protein RibD [Escherichia coli MS 124-1]
 gi|331666763|ref|ZP_08367637.1| riboflavin biosynthesis protein RibD [Escherichia coli TA271]
 gi|192958056|gb|EDV88498.1| riboflavin biosynthesis protein RibD [Escherichia coli E110019]
 gi|209910886|dbj|BAG75960.1| pyrimidine deaminase/reductase [Escherichia coli SE11]
 gi|218359745|emb|CAQ97286.1| fused diaminohydroxyphosphoribosylaminopyrimidine deaminase;
           5-amino-6-(5-phosphoribosylamino) uracil reductase
           [Escherichia coli IAI1]
 gi|257752283|dbj|BAI23785.1| fused diaminohydroxyphosphoribosylaminopyrimidin e deaminase and
           5-amino-6-(5-phosphoribosylamino) uracil reductase
           [Escherichia coli O26:H11 str. 11368]
 gi|257762928|dbj|BAI34423.1| fused diaminohydroxyphosphoribosylaminopyrimidin e deaminase and
           5-amino-6-(5-phosphoribosylamino) uracil reductase
           [Escherichia coli O111:H- str. 11128]
 gi|291325009|gb|EFE64424.1| riboflavin biosynthesis protein RibD [Escherichia coli B088]
 gi|300404616|gb|EFJ88154.1| riboflavin biosynthesis protein RibD [Escherichia coli MS 84-1]
 gi|300527132|gb|EFK48201.1| riboflavin biosynthesis protein RibD [Escherichia coli MS 119-7]
 gi|300843059|gb|EFK70819.1| riboflavin biosynthesis protein RibD [Escherichia coli MS 124-1]
 gi|315256239|gb|EFU36207.1| riboflavin biosynthesis protein RibD [Escherichia coli MS 85-1]
 gi|323152118|gb|EFZ38411.1| riboflavin biosynthesis protein RibD [Escherichia coli EPECa14]
 gi|323184760|gb|EFZ70131.1| riboflavin biosynthesis protein RibD [Escherichia coli 1357]
 gi|323945315|gb|EGB41371.1| riboflavin biosynthesis protein RibD [Escherichia coli H120]
 gi|324016680|gb|EGB85899.1| riboflavin biosynthesis protein RibD [Escherichia coli MS 117-3]
 gi|331065987|gb|EGI37871.1| riboflavin biosynthesis protein RibD [Escherichia coli TA271]
          Length = 367

 Score =  115 bits (288), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 36/155 (23%), Positives = 58/155 (37%), Gaps = 21/155 (13%)

Query: 3   KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +   +M+ AL+ AQ      +  P VG V V + +I+    ++         HAE+ A+R
Sbjct: 2   QDEYYMARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGE----PHAEVHALR 57

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           M               YVTLEPC        C  A+  A + R+     +P       G 
Sbjct: 58  MAGEKA-----KGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVASMQDPNPQVAGRGL 112

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
                A      ++  G+    + Q+ + F K  R
Sbjct: 113 YRLQQAG----IDVSHGLMMSEAEQLNKGFLKRMR 143


>gi|119718363|ref|YP_925328.1| cytosine deaminase [Nocardioides sp. JS614]
 gi|119539024|gb|ABL83641.1| Cytosine deaminase [Nocardioides sp. JS614]
          Length = 154

 Score =  114 bits (287), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 34/147 (23%), Positives = 55/147 (37%), Gaps = 12/147 (8%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
                +  A+EEA+       IP+GAV + + +++    NR  +L     H E   +   
Sbjct: 2   TDEEMLVLAVEEARRGLAEGGIPIGAVLIHDGEVLGGGHNRRVQLGSAIRHGETDCLENI 61

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
            R L   +     +  TL PC MC  AI L  I R+  G +    GG E           
Sbjct: 62  GR-LPASVYARSTMVTTLSPCDMCTGAILLYGIPRVVVGENRNFLGGEELLAS------- 113

Query: 123 HHSPEIYPGISEQR-SRQIIQDFFKER 148
               E+   + +     +++  F  E 
Sbjct: 114 -RGVEVV--VLDDLGCVEMMATFIAEH 137


>gi|323144123|ref|ZP_08078762.1| riboflavin biosynthesis protein RibD [Succinatimonas hippei YIT
           12066]
 gi|322416100|gb|EFY06795.1| riboflavin biosynthesis protein RibD [Succinatimonas hippei YIT
           12066]
          Length = 366

 Score =  114 bits (287), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 38/147 (25%), Positives = 56/147 (38%), Gaps = 21/147 (14%)

Query: 8   MSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M  AL+ A            VG V V N  II    +          HAEI+A+R     
Sbjct: 1   MKRALKLAARGKFTTSPNPAVGCVIVRNGMIIGEGYHHKAGE----PHAEIMAMRSAG-- 54

Query: 66  LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
                +     YVTLEPC        CA A+  A ++R+     +P       G +    
Sbjct: 55  ---SSVAGATCYVTLEPCSHYGRTPPCAKALVKAGVKRVVIACGDPNPQVAGRGVKILKD 111

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFK 146
           A      E+  G+ E ++ ++ + FFK
Sbjct: 112 AG----IEVDVGLYENKALKLNRAFFK 134


>gi|221068807|ref|ZP_03544912.1| CMP/dCMP deaminase zinc-binding [Comamonas testosteroni KF-1]
 gi|220713830|gb|EED69198.1| CMP/dCMP deaminase zinc-binding [Comamonas testosteroni KF-1]
          Length = 162

 Score =  114 bits (287), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 32/83 (38%), Positives = 51/83 (61%)

Query: 25  PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84
           P GAV V + +I++RA N+  EL D +AHAE+ A+R+G +      L    +Y +  PC+
Sbjct: 31  PFGAVLVRDGQILARAVNQVDELCDPSAHAEMQALRIGAKAQGSTDLSGAVMYASGYPCS 90

Query: 85  MCAAAISLARIRRLYYGASNPKG 107
           MC  A+ LA ++++Y+  SN  G
Sbjct: 91  MCYTAMLLAGVKQVYFAYSNEDG 113


>gi|16128399|ref|NP_414948.1| fused diaminohydroxyphosphoribosylaminopyrimidine deaminase and
           5-amino-6-(5-phosphoribosylamino) uracil reductase
           [Escherichia coli str. K-12 substr. MG1655]
 gi|89107284|ref|AP_001064.1| fused diaminohydroxyphosphoribosylaminopyrimidin e deaminase and
           5-amino-6-(5-phosphoribosylamino) uracil reductase
           [Escherichia coli str. K-12 substr. W3110]
 gi|170080000|ref|YP_001729320.1| fused diaminohydroxyphosphoribosylaminopyrimidine deaminase and
           5-amino-6-(5-phosphoribosylamino) uracil reductase
           [Escherichia coli str. K-12 substr. DH10B]
 gi|238899702|ref|YP_002925498.1| fused diaminohydroxyphosphoribosylaminopyrimidine deaminase and
           5-amino-6-(5-phosphoribosylamino) uracil reductase
           [Escherichia coli BW2952]
 gi|256023969|ref|ZP_05437834.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Escherichia sp. 4_1_40B]
 gi|300947935|ref|ZP_07162083.1| riboflavin biosynthesis protein RibD [Escherichia coli MS 116-1]
 gi|300957979|ref|ZP_07170144.1| riboflavin biosynthesis protein RibD [Escherichia coli MS 175-1]
 gi|301025699|ref|ZP_07189215.1| riboflavin biosynthesis protein RibD [Escherichia coli MS 196-1]
 gi|301647336|ref|ZP_07247148.1| riboflavin biosynthesis protein RibD [Escherichia coli MS 146-1]
 gi|331640931|ref|ZP_08342066.1| riboflavin biosynthesis protein RibD [Escherichia coli H736]
 gi|140252|sp|P25539|RIBD_ECOLI RecName: Full=Riboflavin biosynthesis protein RibD; Includes:
           RecName:
           Full=Diaminohydroxyphosphoribosylaminopyrimidine
           deaminase; Short=DRAP deaminase; AltName:
           Full=Riboflavin-specific deaminase; Includes: RecName:
           Full=5-amino-6-(5-phosphoribosylamino)uracil reductase;
           AltName: Full=HTP reductase
 gi|581147|emb|CAA45735.1| unnamed protein product [Escherichia coli K-12]
 gi|1773098|gb|AAB40170.1| riboflavin biosynthesis protein RibG [Escherichia coli]
 gi|1786616|gb|AAC73517.1| fused diaminohydroxyphosphoribosylaminopyrimidine deaminase and
           5-amino-6-(5-phosphoribosylamino) uracil reductase
           [Escherichia coli str. K-12 substr. MG1655]
 gi|73853031|emb|CAJ28593.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase and
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Escherichia coli]
 gi|85674554|dbj|BAE76194.1| fused diaminohydroxyphosphoribosylaminopyrimidin e deaminase and
           5-amino-6-(5-phosphoribosylamino) uracil reductase
           [Escherichia coli str. K12 substr. W3110]
 gi|169887835|gb|ACB01542.1| fused diaminohydroxyphosphoribosylaminopyrimidine deaminase and
           5-amino-6-(5-phosphoribosylamino) uracil reductase
           [Escherichia coli str. K-12 substr. DH10B]
 gi|238861183|gb|ACR63181.1| fused diaminohydroxyphosphoribosylaminopyrimidine deaminase and
           5-amino-6-(5-phosphoribosylamino) uracil reductase
           [Escherichia coli BW2952]
 gi|260450399|gb|ACX40821.1| riboflavin biosynthesis protein RibD [Escherichia coli DH1]
 gi|299880011|gb|EFI88222.1| riboflavin biosynthesis protein RibD [Escherichia coli MS 196-1]
 gi|300315315|gb|EFJ65099.1| riboflavin biosynthesis protein RibD [Escherichia coli MS 175-1]
 gi|300452535|gb|EFK16155.1| riboflavin biosynthesis protein RibD [Escherichia coli MS 116-1]
 gi|301074481|gb|EFK89287.1| riboflavin biosynthesis protein RibD [Escherichia coli MS 146-1]
 gi|309700676|emb|CBI99972.1| riboflavin biosynthesis protein [Escherichia coli ETEC H10407]
 gi|315135096|dbj|BAJ42255.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase
           / 5-amino-6-(5-phosphoribosylamino) uracil reductase
           [Escherichia coli DH1]
 gi|323938599|gb|EGB34848.1| riboflavin biosynthesis protein RibD [Escherichia coli E1520]
 gi|323943220|gb|EGB39376.1| riboflavin biosynthesis protein RibD [Escherichia coli E482]
 gi|331037729|gb|EGI09949.1| riboflavin biosynthesis protein RibD [Escherichia coli H736]
          Length = 367

 Score =  114 bits (287), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 36/155 (23%), Positives = 58/155 (37%), Gaps = 21/155 (13%)

Query: 3   KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +   +M+ AL+ AQ      +  P VG V V + +I+    ++         HAE+ A+R
Sbjct: 2   QDEYYMARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGE----PHAEVHALR 57

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           M               YVTLEPC        C  A+  A + R+     +P       G 
Sbjct: 58  MAGEKA-----KGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVASMQDPNPQVAGRGL 112

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
                A      ++  G+    + Q+ + F K  R
Sbjct: 113 YRLQQAG----IDVSHGLMMSEAEQLNKGFLKRMR 143


>gi|332529894|ref|ZP_08405846.1| cmp/dcmp deaminase zinc-binding protein [Hylemonella gracilis ATCC
           19624]
 gi|332040688|gb|EGI77062.1| cmp/dcmp deaminase zinc-binding protein [Hylemonella gracilis ATCC
           19624]
          Length = 170

 Score =  114 bits (287), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 37/158 (23%), Positives = 65/158 (41%), Gaps = 14/158 (8%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIR 60
           ++ + ++  A+  + N   R   P GAV V    ++++ A     E  D T HAE  A+R
Sbjct: 15  ERDSSYLRQAITWSANGRARGNRPFGAVIVSEQGEVLAEAWCNTSETGDCTGHAETNAVR 74

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY-----------GASNPKGGG 109
           +   ++ ++ L    LY + EPC MCA AI  + I R+ Y           G    +   
Sbjct: 75  LVSPLVDRDTLARATLYSSAEPCVMCAGAIFWSNIGRVVYGIDAVRLRVFRGERAEQRDA 134

Query: 110 IENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
             +    +  +   H  E       +++    Q F+K 
Sbjct: 135 ELSCRDVFASSP--HPIECIGPALIEQASAPHQGFWKR 170


>gi|310790867|gb|EFQ26400.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Glomerella graminicola M1.001]
          Length = 149

 Score =  114 bits (287), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 36/150 (24%), Positives = 60/150 (40%), Gaps = 14/150 (9%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAI 59
           M      ++ A+EEA+  A    +P+GA  V  + K++ R  NR  ++     H E  A+
Sbjct: 1   MNDAEG-LAIAIEEAKTGASEGGVPIGAALVSADGKLLGRGHNRRVQMGSAIHHGETDAL 59

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
               R+  +       +Y TL PC MC  A  L  I R+  G +    GG     Q    
Sbjct: 60  FNSGRLPGKAY-KGSTMYTTLSPCDMCTGACLLYGISRVVIGENRTFLGGEAYLKQ---- 114

Query: 120 ATCHHSPEIYPGISE-QRSRQIIQDFFKER 148
                  E+   + +    + ++  F  E+
Sbjct: 115 ----RGVEVV--VLDSAECKALMDKFIAEK 138


>gi|195623500|gb|ACG33580.1| cytidine/deoxycytidylate deaminase family protein [Zea mays]
          Length = 186

 Score =  114 bits (287), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 40/112 (35%), Positives = 62/112 (55%), Gaps = 1/112 (0%)

Query: 2   KKGNVFMSCALEEAQNAALRNEI-PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
            + + F++ A+EEA       +  P GAV V N++++    N   +  D TAHAE+ AIR
Sbjct: 29  DRDHKFLTKAVEEAYRGVDCGDGGPFGAVVVCNDEVVVSCHNMVLKHTDPTAHAEVTAIR 88

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN 112
             C+ L +  L + ++Y + EPC MC +A+ L+RI+RL YGA       I  
Sbjct: 89  EACKKLGKIELSDCEIYASCEPCPMCFSAVHLSRIKRLVYGAKAEAAIAIGF 140


>gi|255631480|gb|ACU16107.1| unknown [Glycine max]
          Length = 156

 Score =  114 bits (287), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 34/85 (40%), Positives = 48/85 (56%)

Query: 28  AVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCA 87
           A+ V N++I++R  N      D TAHAE+  IR  C  L+Q  L + ++Y + EPC MC 
Sbjct: 26  AIIVCNDEIVARCHNMVLRNTDPTAHAEVTVIRKACEKLNQIELSDCEIYASCEPCPMCF 85

Query: 88  AAISLARIRRLYYGASNPKGGGIEN 112
            AI L+R++RL YGA       I  
Sbjct: 86  GAIHLSRVKRLVYGAKAEAAIAIGF 110


>gi|307312211|ref|ZP_07591847.1| riboflavin biosynthesis protein RibD [Escherichia coli W]
 gi|306907713|gb|EFN38215.1| riboflavin biosynthesis protein RibD [Escherichia coli W]
 gi|315059691|gb|ADT74018.1| fused diaminohydroxyphosphoribosylaminopyrimidine deaminase and
           5-amino-6-(5-phosphoribosylamino) uracil reductase
           [Escherichia coli W]
 gi|323379743|gb|ADX52011.1| riboflavin biosynthesis protein RibD [Escherichia coli KO11]
 gi|324116898|gb|EGC10811.1| riboflavin biosynthesis protein RibD [Escherichia coli E1167]
          Length = 367

 Score =  114 bits (287), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 36/155 (23%), Positives = 58/155 (37%), Gaps = 21/155 (13%)

Query: 3   KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +   +M+ AL+ AQ      +  P VG V V + +I+    ++         HAE+ A+R
Sbjct: 2   QDEYYMARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGE----PHAEVHALR 57

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           M               YVTLEPC        C  A+  A + R+     +P       G 
Sbjct: 58  MAGEKA-----KGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVASMQDPNPQVAGRGL 112

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
                A      ++  G+    + Q+ + F K  R
Sbjct: 113 YRLQQAG----IDVSHGLMMSEAEQLNKGFLKRMR 143


>gi|51246637|ref|YP_066521.1| riboflavin biosynthesis protein (RibD) [Desulfotalea psychrophila
           LSv54]
 gi|50877674|emb|CAG37514.1| probable riboflavin biosynthesis protein (RibD) [Desulfotalea
           psychrophila LSv54]
          Length = 401

 Score =  114 bits (287), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 43/155 (27%), Positives = 65/155 (41%), Gaps = 21/155 (13%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           ++    +M  AL EA+    R    P VGA+ V +  ++ R  +     K  T HAE+ A
Sbjct: 36  IELDQKYMLLALAEARRGQGRTSPNPCVGAIIVGDGSVVGRGYH----KKAGTPHAEVHA 91

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
           +R                YVTLEPC        C  A++ A + R+  G ++P       
Sbjct: 92  LRDAGEKA-----AGATAYVTLEPCSHTGRTPPCCVALAKAGVLRVVVGMTDPNPLVNGR 146

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
           G Q+       H  E+  GI E   R+I + F K+
Sbjct: 147 GVQYLRD----HGIEVSTGICEADCREINRPFIKK 177


>gi|312963303|ref|ZP_07777786.1| riboflavin biosynthesis protein RibD [Pseudomonas fluorescens WH6]
 gi|311282383|gb|EFQ60981.1| riboflavin biosynthesis protein RibD [Pseudomonas fluorescens WH6]
          Length = 378

 Score =  114 bits (287), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 38/152 (25%), Positives = 56/152 (36%), Gaps = 21/152 (13%)

Query: 4   GNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
              +M+ ALE A+N          VG V V + +I+    +          HAE+ A+R 
Sbjct: 12  DAHYMARALELARNGLYTTHPNPRVGCVIVRDGQIVGEGWHER--TGQP--HAEVHALRA 67

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
                          YVTLEPC        CA A+  A + R+     +P       G Q
Sbjct: 68  AGDKA-----RGATAYVTLEPCSHYGHTPPCADALVSAGLARVVAAMQDPNPEVAGRGMQ 122

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
               A      E+  G+ E  +R + + F K 
Sbjct: 123 RLAQAG----IEVRSGVLEGEARALNRGFLKR 150


>gi|300818262|ref|ZP_07098473.1| riboflavin biosynthesis protein RibD [Escherichia coli MS 107-1]
 gi|300529153|gb|EFK50215.1| riboflavin biosynthesis protein RibD [Escherichia coli MS 107-1]
          Length = 367

 Score =  114 bits (287), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 36/155 (23%), Positives = 58/155 (37%), Gaps = 21/155 (13%)

Query: 3   KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +   +M+ AL+ AQ      +  P VG V V + +I+    ++         HAE+ A+R
Sbjct: 2   QDEYYMARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGE----PHAEVHALR 57

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           M               YVTLEPC        C  A+  A + R+     +P       G 
Sbjct: 58  MAGEKA-----KGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVASMQDPNPQVAGRGL 112

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
                A      ++  G+    + Q+ + F K  R
Sbjct: 113 YRLQQAG----IDVSHGLMMSEAEQLNKGFLKRMR 143


>gi|170021214|ref|YP_001726168.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Escherichia coli ATCC 8739]
 gi|188492525|ref|ZP_02999795.1| riboflavin biosynthesis protein RibD [Escherichia coli 53638]
 gi|194438906|ref|ZP_03070991.1| riboflavin biosynthesis protein RibD [Escherichia coli 101-1]
 gi|253774601|ref|YP_003037432.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
 gi|254160480|ref|YP_003043588.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Escherichia coli B str. REL606]
 gi|300930291|ref|ZP_07145704.1| riboflavin biosynthesis protein RibD [Escherichia coli MS 187-1]
 gi|312970509|ref|ZP_07784690.1| riboflavin biosynthesis protein RibD [Escherichia coli 1827-70]
 gi|169756142|gb|ACA78841.1| riboflavin biosynthesis protein RibD [Escherichia coli ATCC 8739]
 gi|188487724|gb|EDU62827.1| riboflavin biosynthesis protein RibD [Escherichia coli 53638]
 gi|194422200|gb|EDX38202.1| riboflavin biosynthesis protein RibD [Escherichia coli 101-1]
 gi|242376192|emb|CAQ30883.1| fused diaminohydroxyphosphoribosylaminopyrimidine deaminase /
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Escherichia coli BL21(DE3)]
 gi|253325645|gb|ACT30247.1| riboflavin biosynthesis protein RibD [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|253972381|gb|ACT38052.1| fused diaminohydroxyphosphoribosylaminopyrimidine deaminase and
           5-amino-6-(5-phosphoribosylamino) uracil reductase
           [Escherichia coli B str. REL606]
 gi|253976591|gb|ACT42261.1| fused diaminohydroxyphosphoribosylaminopyrimidine deaminase and
           5-amino-6-(5-phosphoribosylamino) uracil reductase
           [Escherichia coli BL21(DE3)]
 gi|300461863|gb|EFK25356.1| riboflavin biosynthesis protein RibD [Escherichia coli MS 187-1]
 gi|310337158|gb|EFQ02296.1| riboflavin biosynthesis protein RibD [Escherichia coli 1827-70]
 gi|323963400|gb|EGB58962.1| riboflavin biosynthesis protein RibD [Escherichia coli H489]
 gi|323972264|gb|EGB67474.1| riboflavin biosynthesis protein RibD [Escherichia coli TA007]
          Length = 367

 Score =  114 bits (287), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 36/155 (23%), Positives = 58/155 (37%), Gaps = 21/155 (13%)

Query: 3   KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +   +M+ AL+ AQ      +  P VG V V + +I+    ++         HAE+ A+R
Sbjct: 2   QDEYYMARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGE----PHAEVHALR 57

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           M               YVTLEPC        C  A+  A + R+     +P       G 
Sbjct: 58  MAGEKA-----KGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVASMQDPNPQVAGRGL 112

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
                A      ++  G+    + Q+ + F K  R
Sbjct: 113 YRLQQAG----IDVSHGLMMSEAEQLNKGFLKRMR 143


>gi|23928436|gb|AAN40022.1| putative cytidine deaminase [Zea mays]
          Length = 180

 Score =  114 bits (287), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 40/112 (35%), Positives = 60/112 (53%), Gaps = 1/112 (0%)

Query: 2   KKGNVFMSCALEEAQNAALRN-EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
            + + F++ A+EEA        E P GAV V N++++    N   +  D  AHAE+ AIR
Sbjct: 23  DRDHKFLTKAVEEAYRGVDCGDEGPFGAVVVRNDEVVVSCHNMVLKHTDPIAHAEVTAIR 82

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN 112
             C+ L +  L + ++Y + EPC MC  A+ L+RI+RL YGA       I  
Sbjct: 83  EACKKLGKIELSDCEIYASCEPCPMCFGALHLSRIKRLVYGAKAEAAIAIGF 134


>gi|311243850|ref|XP_003121217.1| PREDICTED: tRNA-specific adenosine deaminase 2 isoform 2 [Sus
           scrofa]
          Length = 152

 Score =  114 bits (287), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 31/107 (28%), Positives = 50/107 (46%), Gaps = 8/107 (7%)

Query: 49  DVTAHAEILAIRMGCRILS------QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGA 102
           + T HAE++AI               E+     LYVT+EPC MCAAA+ L +I  + YG 
Sbjct: 28  NATRHAEMVAIDQVLDWCHRGGKSPSEVFERTVLYVTVEPCIMCAAALRLMKIPLVVYGC 87

Query: 103 SNPKGGGIENGTQF--YTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
            N + GG  +        L       +  PG   + + ++++ F+K+
Sbjct: 88  QNERFGGCGSVLDIASADLPNTGRPFQCIPGYRAEEAVEMLKTFYKQ 134


>gi|78222833|ref|YP_384580.1| 5-amino-6-(5-phosphoribosylamino)uracil
           reductase/diaminohydroxyphosphoribosylaminopyrimidine
           deaminase [Geobacter metallireducens GS-15]
 gi|78194088|gb|ABB31855.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Geobacter
           metallireducens GS-15]
          Length = 370

 Score =  114 bits (287), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 40/148 (27%), Positives = 60/148 (40%), Gaps = 21/148 (14%)

Query: 5   NVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
              M  AL  A+    +      VG V V +  I+    +R    K  T HAE+ A+R  
Sbjct: 6   EKIMKRALALARRGKGKTSPNPAVGCVIVRDGAIVGEGWHR----KAGTPHAEVHALRQA 61

Query: 63  CRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116
             +         D+YVTLEPC        CA A+  A + R++ G  +P       G + 
Sbjct: 62  GELA-----RGADVYVTLEPCSHFGKTPPCADALVEAGVGRVFVGMVDPNPKVSGRGIER 116

Query: 117 YTLATCHHSPEIYPGISEQRSRQIIQDF 144
             +A      E+  GI E   R++ + F
Sbjct: 117 LRVAG----IEVVTGIREAECRRLNEPF 140


>gi|255935941|ref|XP_002558997.1| Pc13g05630 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211583617|emb|CAP91632.1| Pc13g05630 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 165

 Score =  114 bits (287), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 37/147 (25%), Positives = 60/147 (40%), Gaps = 22/147 (14%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
            K   FM  AL   + A    E PVG V V N++I+    N      +V           
Sbjct: 11  SKHGYFMKQALLMGEKAIQSGETPVGCVLVHNDQIVGYGMNDTNRSMNV----------K 60

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIR-RLYYGASNPKGGGIENGTQFYTLA 120
             +   +  L   DLYVT+EPC MCA+A+   RIR ++       +              
Sbjct: 61  MLQSHPRSALQSTDLYVTVEPCVMCASALKQYRIRNKVV-----DRSRLTG------PSP 109

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKE 147
           +   S  +Y G+ E+ +  +++ F+ +
Sbjct: 110 SIDPSYPVYGGLFEKEAIMLLRRFYIQ 136


>gi|254773714|ref|ZP_05215230.1| cytidine/deoxycytidylate deaminase [Mycobacterium avium subsp.
           avium ATCC 25291]
          Length = 177

 Score =  114 bits (287), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 29/94 (30%), Positives = 45/94 (47%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           F    ++ A+        P   V V + ++++ + N+  +  D TAHAEILAIR  C  L
Sbjct: 15  FARRTIDLARQNVAEGGRPFATVIVQDGEVLAESANKAAQTNDPTAHAEILAIRAACLKL 74

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
             E L +  +YV   PC MC  A+     R + +
Sbjct: 75  GTEHLVDATIYVLAHPCPMCLGALYYCSPREVVF 108


>gi|331661791|ref|ZP_08362714.1| riboflavin biosynthesis protein RibD [Escherichia coli TA143]
 gi|331060213|gb|EGI32177.1| riboflavin biosynthesis protein RibD [Escherichia coli TA143]
          Length = 367

 Score =  114 bits (287), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 36/155 (23%), Positives = 58/155 (37%), Gaps = 21/155 (13%)

Query: 3   KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +   +M+ AL+ AQ      +  P VG V V + +I+    ++         HAE+ A+R
Sbjct: 2   QDEYYMARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGE----PHAEVHALR 57

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           M               YVTLEPC        C  A+  A + R+     +P       G 
Sbjct: 58  MAGEKA-----KGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVASMQDPNPQVAGRGL 112

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
                A      ++  G+    + Q+ + F K  R
Sbjct: 113 YRLQQAG----IDVSHGLMMSEAEQLNKGFLKRMR 143


>gi|320173768|gb|EFW48951.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-5-phosphoribosylaminouracil
           reductase [Shigella dysenteriae CDC 74-1112]
          Length = 367

 Score =  114 bits (287), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 36/155 (23%), Positives = 58/155 (37%), Gaps = 21/155 (13%)

Query: 3   KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +   +M+ AL+ AQ      +  P VG V V + +I+    ++         HAE+ A+R
Sbjct: 2   QDEYYMARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGE----PHAEVHALR 57

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           M               YVTLEPC        C  A+  A + R+     +P       G 
Sbjct: 58  MAGEKA-----KGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVASMQDPNPQVAGRGL 112

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
                A      ++  G+    + Q+ + F K  R
Sbjct: 113 YRLQQAG----IDVSHGLMMSEAEQLNKGFLKRMR 143


>gi|332202099|gb|EGJ16168.1| riboflavin biosynthesis protein RibD [Streptococcus pneumoniae
           GA41317]
          Length = 366

 Score =  114 bits (287), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 41/150 (27%), Positives = 60/150 (40%), Gaps = 21/150 (14%)

Query: 3   KGNVFMSCALEEAQN-AALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
             + +M  A++ AQ  A   N  P VGAV V +N II +  +         +HAE  A++
Sbjct: 2   SDSKYMKLAIKLAQKGAGYVNPNPMVGAVIVKDNHIIGQGYHEFFGG----SHAERNALK 57

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
             CR           LYVTLEPC        C  AI  + I R+  G+ +        G 
Sbjct: 58  N-CRESP----VGATLYVTLEPCCHFGKTPPCIDAIIDSGITRVVIGSLDCNPIVSGKGV 112

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
           +           ++  GI E     +I+ F
Sbjct: 113 KILEENNL----QVTVGILENECLNLIKSF 138


>gi|225860210|ref|YP_002741719.1| riboflavin biosynthesis protein RibD [Streptococcus pneumoniae
           Taiwan19F-14]
 gi|298230114|ref|ZP_06963795.1| riboflavin biosynthesis protein RibD [Streptococcus pneumoniae str.
           Canada MDR_19F]
 gi|298255023|ref|ZP_06978609.1| riboflavin biosynthesis protein RibD [Streptococcus pneumoniae str.
           Canada MDR_19A]
 gi|298501980|ref|YP_003723920.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase
           [Streptococcus pneumoniae TCH8431/19A]
 gi|225726901|gb|ACO22752.1| riboflavin biosynthesis protein RibD [Streptococcus pneumoniae
           Taiwan19F-14]
 gi|298237575|gb|ADI68706.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase
           [Streptococcus pneumoniae TCH8431/19A]
 gi|327390586|gb|EGE88926.1| riboflavin biosynthesis protein RibD [Streptococcus pneumoniae
           GA04375]
          Length = 366

 Score =  114 bits (287), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 41/150 (27%), Positives = 60/150 (40%), Gaps = 21/150 (14%)

Query: 3   KGNVFMSCALEEAQN-AALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
             + +M  A++ AQ  A   N  P VGAV V +N II +  +         +HAE  A++
Sbjct: 2   SDSKYMKLAIKLAQKGAGYVNPNPMVGAVIVKDNHIIGQGYHEFFGG----SHAERNALK 57

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
             CR           LYVTLEPC        C  AI  + I R+  G+ +        G 
Sbjct: 58  N-CRESP----VGATLYVTLEPCCHFGKTPPCIDAIIDSGITRVVIGSLDCNPIVSGKGV 112

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
           +           ++  GI E     +I+ F
Sbjct: 113 KILEENNL----QVTVGILENECLNLIKSF 138


>gi|194397666|ref|YP_002036884.1| riboflavin biosynthesis protein [Streptococcus pneumoniae G54]
 gi|194357333|gb|ACF55781.1| riboflavin biosynthesis protein [Streptococcus pneumoniae G54]
          Length = 366

 Score =  114 bits (287), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 41/150 (27%), Positives = 60/150 (40%), Gaps = 21/150 (14%)

Query: 3   KGNVFMSCALEEAQN-AALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
             + +M  A++ AQ  A   N  P VGAV V +N II +  +         +HAE  A++
Sbjct: 2   SDSKYMKLAIKLAQKGAGYVNPNPMVGAVIVKDNHIIGQGYHEFFGG----SHAERNALK 57

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
             CR           LYVTLEPC        C  AI  + I R+  G+ +        G 
Sbjct: 58  N-CRESP----VGATLYVTLEPCCHFGKTPPCIDAIIDSGITRVVIGSLDCNPIVSGKGV 112

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
           +           ++  GI E     +I+ F
Sbjct: 113 KILEENNL----QVTVGILENECLNLIKSF 138


>gi|218693874|ref|YP_002401541.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Escherichia coli 55989]
 gi|218350606|emb|CAU96298.1| fused diaminohydroxyphosphoribosylaminopyrimidine deaminase;
           5-amino-6-(5-phosphoribosylamino) uracil reductase
           [Escherichia coli 55989]
          Length = 367

 Score =  114 bits (287), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 36/155 (23%), Positives = 58/155 (37%), Gaps = 21/155 (13%)

Query: 3   KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +   +M+ AL+ AQ      +  P VG V V + +I+    ++         HAE+ A+R
Sbjct: 2   QDEYYMARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGE----PHAEVHALR 57

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           M               YVTLEPC        C  A+  A + R+     +P       G 
Sbjct: 58  MAGEKA-----KGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVASMQDPNPQVAGRGL 112

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
                A      ++  G+    + Q+ + F K  R
Sbjct: 113 YRLQQAG----IDVSHGLMMSEAEQLNKGFLKRMR 143


>gi|82542902|ref|YP_406849.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Shigella boydii Sb227]
 gi|81244313|gb|ABB65021.1| bifunctional pyrimidine deaminase/reductase in pathway of
           riboflavin synthesis [Shigella boydii Sb227]
 gi|320186043|gb|EFW60788.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-5-phosphoribosylaminouracil
           reductase [Shigella flexneri CDC 796-83]
 gi|332098511|gb|EGJ03477.1| riboflavin biosynthesis protein RibD [Shigella boydii 3594-74]
          Length = 367

 Score =  114 bits (287), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 36/155 (23%), Positives = 58/155 (37%), Gaps = 21/155 (13%)

Query: 3   KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +   +M+ AL+ AQ      +  P VG V V + +I+    ++         HAE+ A+R
Sbjct: 2   QDEYYMARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGE----PHAEVHALR 57

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           M               YVTLEPC        C  A+  A + R+     +P       G 
Sbjct: 58  MAGEKA-----KGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVASMQDPNPQVAGRGL 112

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
                A      ++  G+    + Q+ + F K  R
Sbjct: 113 YRLQQAG----IDVSHGLMMSEAEQLNKGFLKRMR 143


>gi|226329108|ref|ZP_03804626.1| hypothetical protein PROPEN_03011 [Proteus penneri ATCC 35198]
 gi|225202294|gb|EEG84648.1| hypothetical protein PROPEN_03011 [Proteus penneri ATCC 35198]
          Length = 384

 Score =  114 bits (287), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 37/154 (24%), Positives = 57/154 (37%), Gaps = 21/154 (13%)

Query: 4   GNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
              +M  A+E A       +  P VG V V   +I+    + +        HAE+ A++M
Sbjct: 17  DEHYMRRAIELAALGRFTTSPNPNVGCVIVKEGEIVGEGYHHHAGG----PHAEVNALKM 72

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
                          YVTLEPC        CA A+  A ++R+     +P       G  
Sbjct: 73  AGDKA-----KGATAYVTLEPCSHFGKTPPCADALINAGVKRVVAAMQDPNPQVAGRGLH 127

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
               A      ++  GI  Q + ++   FFK  R
Sbjct: 128 KLLSAG----IDVSHGILMQEAEKLNVGFFKRMR 157


>gi|187734040|ref|YP_001879123.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Shigella boydii CDC 3083-94]
 gi|187431032|gb|ACD10306.1| riboflavin biosynthesis protein RibD [Shigella boydii CDC 3083-94]
          Length = 367

 Score =  114 bits (287), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 36/155 (23%), Positives = 58/155 (37%), Gaps = 21/155 (13%)

Query: 3   KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +   +M+ AL+ AQ      +  P VG V V + +I+    ++         HAE+ A+R
Sbjct: 2   QDEYYMARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGE----PHAEVHALR 57

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           M               YVTLEPC        C  A+  A + R+     +P       G 
Sbjct: 58  MAGEKA-----KGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVASMQDPNPQVAGRGL 112

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
                A      ++  G+    + Q+ + F K  R
Sbjct: 113 YRLQQAG----IDVSHGLMMSEAEQLNKGFLKRMR 143


>gi|328675280|gb|AEB27955.1| Diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Francisella cf. novicida 3523]
          Length = 355

 Score =  114 bits (287), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 36/154 (23%), Positives = 57/154 (37%), Gaps = 22/154 (14%)

Query: 1   MKK-GNVFMSCALEEAQNAALR--NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57
           MK     +M  AL  A    L       VG + V N  IIS   +         AHAE+ 
Sbjct: 1   MKNIDKYYMQQALSLANRGRLTVSPNPMVGCIIVKNGTIISEGWHETVGK----AHAEVH 56

Query: 58  AIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIE 111
           A+                +YVTLEPC        C   +  A I+++     +P      
Sbjct: 57  ALTKVGDKA-----KGATVYVTLEPCCHHGRTPPCTDTLIKAGIKKVVIATLDPNPKVAG 111

Query: 112 NGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
            G +    A       +  G+ E++++++ + FF
Sbjct: 112 KGVKKLKDAG----ITVEVGLLEKQAQELNKIFF 141


>gi|146297767|ref|YP_001192358.1| riboflavin biosynthesis protein RibD [Flavobacterium johnsoniae
           UW101]
 gi|146152185|gb|ABQ03039.1| riboflavin biosynthesis protein RibD [Flavobacterium johnsoniae
           UW101]
          Length = 349

 Score =  114 bits (287), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 36/160 (22%), Positives = 64/160 (40%), Gaps = 22/160 (13%)

Query: 1   MKKGNVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           M K   ++   +E A+N          VG+V V  + II    ++         HAE+ A
Sbjct: 1   MNKHEKYIKRCIELARNGFGTTYPNPMVGSVIVYEDTIIGEGWHKKAGE----PHAEVNA 56

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
           +R    +  + +L +  +YV+LEPC        C   I   +I  +  G  +P       
Sbjct: 57  VRS---VKDKSLLKKATIYVSLEPCSHFGKTPPCCDLIIANKIPNVVVGTVDPNEKVAGR 113

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF---KERR 149
           G +    A  +    +  GI E    ++ + FF   +++R
Sbjct: 114 GIKKLIEAGAN----VVVGILEDECNELNKRFFTFHQKKR 149


>gi|303241094|ref|ZP_07327603.1| riboflavin biosynthesis protein RibD [Acetivibrio cellulolyticus
           CD2]
 gi|302591354|gb|EFL61093.1| riboflavin biosynthesis protein RibD [Acetivibrio cellulolyticus
           CD2]
          Length = 362

 Score =  114 bits (287), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 41/145 (28%), Positives = 62/145 (42%), Gaps = 21/145 (14%)

Query: 8   MSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           MS A+E A+    R    P VGAV V + +II+   +         AHAE+ A +     
Sbjct: 1   MSRAIELAKKGWGRTNPNPLVGAVIVKDERIIAEGFHEVIGG----AHAEVSAFKNAV-- 54

Query: 66  LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
              E +    LYV LEPC        CA AI  A+I+++     +P       G Q    
Sbjct: 55  ---EDVAGGTLYVNLEPCSHYGRTPPCAKAIIEAKIKKVVVAMIDPNPKVSGRGVQMLRD 111

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDF 144
           A      E+  G+ E  ++++ + F
Sbjct: 112 AG----IEVEVGVLEDEAKKLNEIF 132


>gi|239627638|ref|ZP_04670669.1| riboflavin synthase subunit alpha [Clostridiales bacterium
           1_7_47_FAA]
 gi|239517784|gb|EEQ57650.1| riboflavin synthase subunit alpha [Clostridiales bacterium
           1_7_47FAA]
          Length = 370

 Score =  114 bits (287), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 44/156 (28%), Positives = 59/156 (37%), Gaps = 21/156 (13%)

Query: 2   KKGNVFMSCALEEAQNAALR-NEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
              N++M  AL  A     R N  P VGAV V +  +I +  +          HAE    
Sbjct: 4   TSDNIYMGRALALAAKGEGRVNPNPLVGAVIVRDGAVIGQGYHGFYGG----PHAE---- 55

Query: 60  RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113
           R     L+        LYVTLEPC        C  AI  + IRR+  GA +P       G
Sbjct: 56  RAALDSLTAPA-KGAVLYVTLEPCCHYGKTPPCTDAIIKSGIRRVVIGAMDPNPLVAGKG 114

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
                     H  E+  G+ E+   +  + FF   R
Sbjct: 115 IAALKS----HGIEVIQGVLEEECIRQNEVFFHFIR 146


>gi|120434994|ref|YP_860680.1| bifunctional riboflavin biosynthesis protein RibD [Gramella
           forsetii KT0803]
 gi|117577144|emb|CAL65613.1| bifunctional riboflavin biosynthesis protein RibD [Gramella
           forsetii KT0803]
          Length = 347

 Score =  114 bits (287), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 42/160 (26%), Positives = 66/160 (41%), Gaps = 22/160 (13%)

Query: 1   MKKGNVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           M     ++   +E AQN          VG+V V  NKII    ++         HAE+ A
Sbjct: 1   MNIHEKYIKRCIELAQNGLGTTYPNPMVGSVIVYKNKIIGEGWHKKAGE----PHAEVNA 56

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
           I     +  Q +L    +YV+LEPC        C+  I    I+++  G  +P       
Sbjct: 57  INS---VKDQSLLKHAIIYVSLEPCSHFGKTPPCSDLIIAKGIKKVIIGTMDPFAKVAGR 113

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF---KERR 149
           G +    A C    E+  GI E+   ++ + FF   K++R
Sbjct: 114 GIKKLMDAGC----EVNVGILEEECLELNKRFFTFQKKQR 149


>gi|293408560|ref|ZP_06652399.1| riboflavin biosynthesis protein RibD [Escherichia coli B354]
 gi|291471738|gb|EFF14221.1| riboflavin biosynthesis protein RibD [Escherichia coli B354]
          Length = 367

 Score =  114 bits (287), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 36/155 (23%), Positives = 58/155 (37%), Gaps = 21/155 (13%)

Query: 3   KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +   +M+ AL+ AQ      +  P VG V V + +I+    ++         HAE+ A+R
Sbjct: 2   QDEYYMARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGE----PHAEVHALR 57

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           M               YVTLEPC        C  A+  A + R+     +P       G 
Sbjct: 58  MAGEKA-----KGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVASMQDPNPQVAGRGL 112

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
                A      ++  G+    + Q+ + F K  R
Sbjct: 113 YRLQQAG----IDVSHGLMMSEAEQLNKGFLKRMR 143


>gi|52142146|ref|YP_084683.1| riboflavin biosynthesis protein;
           diaminohydroxyphosphoribosylaminopyrimidine deaminase
           [Bacillus cereus E33L]
 gi|51975615|gb|AAU17165.1| riboflavin biosynthesis protein;
           diaminohydroxyphosphoribosylaminopyrimidine deaminase
           [Bacillus cereus E33L]
          Length = 367

 Score =  114 bits (287), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 43/153 (28%), Positives = 65/153 (42%), Gaps = 23/153 (15%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57
           M +  ++M  ALE A  A      P   VG+V V +N+I+    +          HAEI 
Sbjct: 1   MLEHELYMKLALENA-KAMKGQTTPNPLVGSVIVNDNRIVGIGAHMKAGE----PHAEIH 55

Query: 58  AIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIE 111
           AIRM              +YVTLEPC+       CA AI  A I+++     +P      
Sbjct: 56  AIRMAGEQAC-----GGTIYVTLEPCSHHGRTGPCAEAIVQAGIKKVVVATLDPNPLVSG 110

Query: 112 NGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
            G +    A      E+  G+ E+ S+++ + F
Sbjct: 111 RGIKILQDAG----IEVLVGVCEEESKKMNEVF 139


>gi|37527755|ref|NP_931100.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Photorhabdus luminescens subsp. laumondii
           TTO1]
 gi|36787191|emb|CAE16271.1| riboflavin biosynthesis protein [includes:
           diaminohydroxyphosphoribosylaminopyrimidine deaminase
           (riboflavin-specific deaminase);
           5-amino-6-(5-phosphoribosylamino)uracil reductase (HTP
           reductase)] [Photorhabdus luminescens subsp. laumondii
           TTO1]
          Length = 369

 Score =  114 bits (287), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 35/157 (22%), Positives = 58/157 (36%), Gaps = 21/157 (13%)

Query: 1   MKKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           M     +M+ ALE A+      +  P VG V V + +I+    +          HAE+ A
Sbjct: 1   MNNDKKYMARALELARQGRFTTSPNPNVGCVIVHDGQIVGEGFHLRSGE----PHAEVYA 56

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
           +++              +YVTLEPC        CA A+  A + R+     +P       
Sbjct: 57  LQIAGDKA-----KGATVYVTLEPCSHHGKTPPCADALIAAGVSRVVAAMQDPNPQVAGR 111

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
           G      A       +  G+  + +  + + F K  R
Sbjct: 112 GLYKLQQAG----IAVEHGLMMEEAESLNRGFLKRMR 144


>gi|315616646|gb|EFU97263.1| riboflavin biosynthesis protein RibD [Escherichia coli 3431]
          Length = 367

 Score =  114 bits (287), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 36/155 (23%), Positives = 58/155 (37%), Gaps = 21/155 (13%)

Query: 3   KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +   +M+ AL+ AQ      +  P VG V V + +I+    ++         HAE+ A+R
Sbjct: 2   QDEYYMARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGE----PHAEVHALR 57

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           M               YVTLEPC        C  A+  A + R+     +P       G 
Sbjct: 58  MAGEKA-----KGATAYVTLEPCSHHGRTPPCCDALIDAGVARVVASMQDPNPQVAGRGL 112

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
                A      ++  G+    + Q+ + F K  R
Sbjct: 113 YRLQQAG----IDVSHGLMMSEAEQLNKGFLKRMR 143


>gi|284920223|emb|CBG33282.1| riboflavin biosynthesis protein [Escherichia coli 042]
          Length = 367

 Score =  114 bits (287), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 36/155 (23%), Positives = 58/155 (37%), Gaps = 21/155 (13%)

Query: 3   KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +   +M+ AL+ AQ      +  P VG V V + +I+    ++         HAE+ A+R
Sbjct: 2   QDEYYMARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGE----PHAEVHALR 57

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           M               YVTLEPC        C  A+  A + R+     +P       G 
Sbjct: 58  MAGEKA-----KGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVASMQDPNPQVAGRGL 112

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
                A      ++  G+    + Q+ + F K  R
Sbjct: 113 YRLQQAG----IDVSHGLMMSEAEQLNKGFLKRMR 143


>gi|23097878|ref|NP_691344.1| riboflavin specific deaminase [Oceanobacillus iheyensis HTE831]
 gi|22776102|dbj|BAC12379.1| riboflavin specific deaminase
           (diaminohydroxyphosphoribosylaminopyrimidine deaminase :
           5-amino-6-(5-phosphoribosylamino) uracil reductase)
           [Oceanobacillus iheyensis HTE831]
          Length = 367

 Score =  114 bits (287), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 43/154 (27%), Positives = 66/154 (42%), Gaps = 25/154 (16%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56
           M     +M  A+E A+  A++ +    P VGAV V +N+I+    +          HAEI
Sbjct: 1   MTDDKHYMKLAIENAK--AMKGQTDPNPLVGAVIVNHNRIVGVGSHLKAGE----PHAEI 54

Query: 57  LAIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGI 110
            A++M       E      +YVTLEPC+       CA A+  A +RR+     +P     
Sbjct: 55  HALQMAG-----ENAKGATIYVTLEPCSHQGRTGPCALALVEAGVRRVVIATLDPNPLVA 109

Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
            NG +    A      E+  G+ E  S  + + F
Sbjct: 110 GNGVKILEDAG----IEVEVGVLEDESISMNEVF 139


>gi|332885428|gb|EGK05677.1| riboflavin biosynthesis protein RibD [Dysgonomonas mossii DSM
           22836]
          Length = 348

 Score =  114 bits (286), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 40/153 (26%), Positives = 63/153 (41%), Gaps = 19/153 (12%)

Query: 1   MKKGNVFMSCALEEAQ--NAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           M     +M   L+ A      +     VGAV V N+KII    +R        AHAE+ A
Sbjct: 1   MTVDEKYMYRCLQLALNGKGFVSPNPMVGAVVVHNDKIIGEGFHREYGK----AHAEVNA 56

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
           I     +  + +L E  +YV+LEPC        CA  I   +I  +     +P       
Sbjct: 57  I---ASVKDKSLLKESTIYVSLEPCAHQGKTPPCAQLIIDNQIPHVVIACLDPYPAVSGR 113

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
           G +    A      ++  GI E+ + ++ ++FF
Sbjct: 114 GIKMLQDAG----IKVDVGILEREAWELNKEFF 142


>gi|160897646|ref|YP_001563228.1| CMP/dCMP deaminase [Delftia acidovorans SPH-1]
 gi|160363230|gb|ABX34843.1| CMP/dCMP deaminase zinc-binding [Delftia acidovorans SPH-1]
          Length = 153

 Score =  114 bits (286), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 29/106 (27%), Positives = 51/106 (48%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           ++    +  A++ A +  LR   P GA+     +I+S   N   +  D +AHAE+ A+R 
Sbjct: 4   QEHIRLLRHAVQLAHDNRLRGGRPFGALLAREGQILSTGVNEIVQSHDPSAHAEMQALRA 63

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKG 107
           G R  +   L    +Y +  PC MC AA+ +A   ++++   N   
Sbjct: 64  GTRAQANPSLAGCTIYASGHPCPMCLAALVMAGAEQVFFAFDNADA 109


>gi|317470714|ref|ZP_07930099.1| riboflavin biosynthesis protein RibD [Anaerostipes sp. 3_2_56FAA]
 gi|316901849|gb|EFV23778.1| riboflavin biosynthesis protein RibD [Anaerostipes sp. 3_2_56FAA]
          Length = 359

 Score =  114 bits (286), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 39/149 (26%), Positives = 58/149 (38%), Gaps = 21/149 (14%)

Query: 5   NVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
             +M  A+E A+      N  P VGAV V + ++I    +          HAE  A+   
Sbjct: 3   EQYMRRAIELAKKGTGYTNPNPLVGAVIVKDGEVIGEGFHEAYGGL----HAERNAL--- 55

Query: 63  CRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116
                 +     +LYVTLEPC        C  A+  + IR++Y G  +P       G + 
Sbjct: 56  --KSCTKDPNGAELYVTLEPCCHYGRTPPCTEAVIKSGIRKVYVGNVDPNPKVAGMGIKI 113

Query: 117 YTLATCHHSPEIYPGISEQRSRQIIQDFF 145
                  H  E   GI ++  R +   FF
Sbjct: 114 LRE----HGIEAETGILDEECRGLNDIFF 138


>gi|302873074|ref|YP_003841707.1| CMP/dCMP deaminase zinc-binding [Clostridium cellulovorans 743B]
 gi|307688768|ref|ZP_07631214.1| CMP/dCMP deaminase zinc-binding protein [Clostridium cellulovorans
           743B]
 gi|302575931|gb|ADL49943.1| CMP/dCMP deaminase zinc-binding [Clostridium cellulovorans 743B]
          Length = 167

 Score =  114 bits (286), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 37/154 (24%), Positives = 70/154 (45%), Gaps = 16/154 (10%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI- 59
           M   +  M  ALE  + +  + E+PVGAV    ++II RA +     +    HAE+  + 
Sbjct: 1   MNIDDK-MRIALEIGKKSLEQGELPVGAVIFKGDEIIGRAYSSGESKQQFLRHAEMKVLW 59

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
            +  +  S      + L+VTLEPC MC  A   A I  +YY   +P  G +         
Sbjct: 60  EVDEQGYSVRDRKNMQLFVTLEPCMMCLGAAMGAFIGEIYYSVPSPIDGAVA-----LAE 114

Query: 120 ATCHHS---------PEIYPGISEQRSRQIIQDF 144
           ++ + +         P+ + G+ ++  +++++ +
Sbjct: 115 SSLNSNNVEIPSYTLPKCFGGVLQEEGKELLKRY 148


>gi|264678844|ref|YP_003278751.1| CMP/dCMP deaminase, zinc-binding protein [Comamonas testosteroni
           CNB-2]
 gi|262209357|gb|ACY33455.1| CMP/dCMP deaminase, zinc-binding protein [Comamonas testosteroni
           CNB-2]
          Length = 146

 Score =  114 bits (286), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 27/100 (27%), Positives = 47/100 (47%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  A++ A    L+   P GAV    N++++   N      D + HAE+ AIR G +  +
Sbjct: 1   MRMAVDLAHANRLKGGRPFGAVLAQGNEVVATGVNEIIASHDPSTHAEMQAIRAGTQKRA 60

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKG 107
              L  + +Y +  PC MC AA+ +    ++++   N   
Sbjct: 61  NPSLAGLSIYASGHPCPMCLAALVMNGAEQVFFAFDNQDA 100


>gi|259909281|ref|YP_002649637.1| Riboflavin biosynthesis protein RibD [Erwinia pyrifoliae Ep1/96]
 gi|224964903|emb|CAX56426.1| Riboflavin biosynthesis protein RibD [Erwinia pyrifoliae Ep1/96]
 gi|283479336|emb|CAY75252.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Erwinia pyrifoliae DSM 12163]
          Length = 367

 Score =  114 bits (286), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 38/155 (24%), Positives = 58/155 (37%), Gaps = 21/155 (13%)

Query: 3   KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +  ++M+ ALE A+         P VG V V + +I+    +          HAE+ A+R
Sbjct: 2   RDEIYMARALELARRGRFTTTPNPNVGCVLVRDGQIVGEGYHMLAGE----PHAEVHALR 57

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           M               YVTLEPC        C  A+  A I+R+     +P       G 
Sbjct: 58  MAGEKS-----LGATAYVTLEPCSHHGRTPPCCEALIAAGIKRVVTAMQDPNPQVAGRGL 112

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
                A      E+  G+  Q +  + + F K  R
Sbjct: 113 YRLQQAG----IEVSHGLMMQEAEALNRGFLKRMR 143


>gi|219849511|ref|YP_002463944.1| riboflavin biosynthesis protein RibD [Chloroflexus aggregans DSM
           9485]
 gi|219543770|gb|ACL25508.1| riboflavin biosynthesis protein RibD [Chloroflexus aggregans DSM
           9485]
          Length = 409

 Score =  114 bits (286), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 43/150 (28%), Positives = 61/150 (40%), Gaps = 21/150 (14%)

Query: 5   NVFMSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
             +M  AL  AQ AA R    P VGAV V + +I+    +R         HAE+ A+R+ 
Sbjct: 8   ETYMRRALVLAQQAAGRTSPNPMVGAVIVKDGRIVGEGYHRRAGE----PHAEVEALRVA 63

Query: 63  CRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116
                        +YVTLEPC        C  AI  A I  +YY  ++P       G   
Sbjct: 64  GEAA-----RGATMYVTLEPCAHVGRTPPCTDAIIAAGITEVYYAIADPNPLVSGKGHAQ 118

Query: 117 YTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
              A       +  G+ E  + ++ + FFK
Sbjct: 119 LAAAG----IRVQCGVCEAEAFELNRPFFK 144


>gi|310777941|ref|YP_003966274.1| CMP/dCMP deaminase zinc-binding protein [Ilyobacter polytropus DSM
           2926]
 gi|309747264|gb|ADO81926.1| CMP/dCMP deaminase zinc-binding protein [Ilyobacter polytropus DSM
           2926]
          Length = 159

 Score =  114 bits (286), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 34/105 (32%), Positives = 49/105 (46%), Gaps = 1/105 (0%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRM 61
               ++   +E ++ +      P GA+ V     I+  +GN     KD+T HAE    ++
Sbjct: 2   DHEKYLRRCIEISEESVASGNNPFGALLVDKEGNILIESGNIEVTEKDITGHAETTVAKL 61

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPK 106
             +  S+E L E  LY T EPC MC  AI  A I  + YG S  K
Sbjct: 62  AGKKYSKEFLWETTLYTTAEPCCMCTGAIYWANIGNVVYGISEKK 106


>gi|15614117|ref|NP_242420.1| riboflavin specific deaminase [Bacillus halodurans C-125]
 gi|10174171|dbj|BAB05273.1| riboflavin specific
           deaminase(diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase) [Bacillus halodurans C-125]
          Length = 368

 Score =  114 bits (286), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 40/158 (25%), Positives = 61/158 (38%), Gaps = 24/158 (15%)

Query: 3   KGNVFMSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
               +M  AL  A++A  +    P VGAV V + +I+    +          HAE+ AIR
Sbjct: 2   TDEQYMKLALALAESARGQTSPNPLVGAVVVKDGQIVGMGAHLKAGE----PHAEVHAIR 57

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           M               YVTLEPC        CA  +  A + R+     +P       G 
Sbjct: 58  MAGEKA-----KGATAYVTLEPCSHYGKTPPCADLLIEAGVARVVIATEDPFPKVSGRGI 112

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF---KERR 149
           +    A      E+  GI +Q +  + + FF   + +R
Sbjct: 113 RKLQQAG----IEVEVGICKQEALDLNRIFFHFVRTKR 146


>gi|302345996|ref|YP_003814349.1| riboflavin biosynthesis protein RibD [Prevotella melaninogenica
           ATCC 25845]
 gi|302150238|gb|ADK96500.1| riboflavin biosynthesis protein RibD [Prevotella melaninogenica
           ATCC 25845]
          Length = 372

 Score =  114 bits (286), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 38/152 (25%), Positives = 59/152 (38%), Gaps = 18/152 (11%)

Query: 2   KKGNVFMSCALEEAQNA--ALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILA 58
           K    +M   L+ A+N     +    VGAV V    +II    +          HAE+ A
Sbjct: 5   KTDEKYMRRCLQLARNGQQLAKPNPMVGAVIVSKEGRIIGEGYHVRCGKG----HAEVNA 60

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
                R   + +L E  +YV+LEPC        CA  I    +RR+  G  +P       
Sbjct: 61  F-ASVRKEDEALLREATVYVSLEPCSHYGKTPPCADLIISKGVRRVVCGCIDPFAEVQGR 119

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
           G +    A      E+  G+ E+   ++ + F
Sbjct: 120 GVKKIREAG----IEVTVGVLEKECLELNKRF 147


>gi|225858039|ref|YP_002739549.1| riboflavin biosynthesis protein RibD [Streptococcus pneumoniae
           70585]
 gi|225721875|gb|ACO17729.1| riboflavin biosynthesis protein RibD [Streptococcus pneumoniae
           70585]
          Length = 366

 Score =  114 bits (286), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 41/150 (27%), Positives = 59/150 (39%), Gaps = 21/150 (14%)

Query: 3   KGNVFMSCALEEAQN-AALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
             + +M  A++ AQ  A   N  P VGAV V +N II +  +          HAE  A++
Sbjct: 2   SDSKYMKLAIKLAQKGAGYVNPNPMVGAVIVKDNHIIGQGYHEFFGG----PHAERNALK 57

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
             CR           LYVTLEPC        C  AI  + I R+  G+ +        G 
Sbjct: 58  N-CRESP----VGATLYVTLEPCCHFGKTPPCIDAIIDSGITRVVIGSLDCNPIVSGKGV 112

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
           +           ++  GI E     +I+ F
Sbjct: 113 KILEENNL----QVTVGILENECLNLIKSF 138


>gi|221231089|ref|YP_002510241.1| riboflavin biosynthesis protein [Streptococcus pneumoniae ATCC
           700669]
 gi|220673549|emb|CAR68035.1| riboflavin biosynthesis protein [includes:
           diaminohydroxyphosphoribosylaminopyrimidine deaminase
           and 5-amino-6-(5-phosphoribosylamino)uracil reductase]
           [Streptococcus pneumoniae ATCC 700669]
          Length = 366

 Score =  114 bits (286), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 41/150 (27%), Positives = 59/150 (39%), Gaps = 21/150 (14%)

Query: 3   KGNVFMSCALEEAQN-AALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
             + +M  A++ AQ  A   N  P VGAV V +N II +  +          HAE  A++
Sbjct: 2   SDSKYMKLAIKLAQKGAGYVNPNPMVGAVIVKDNHIIGQGYHEFFGG----PHAERNALK 57

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
             CR           LYVTLEPC        C  AI  + I R+  G+ +        G 
Sbjct: 58  N-CRESP----VGATLYVTLEPCCHFGKTPPCIDAIIDSGITRVVIGSLDCNPIVSGKGV 112

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
           +           ++  GI E     +I+ F
Sbjct: 113 KILEENNL----QVTVGILENECLNLIKSF 138


>gi|183603379|ref|ZP_02714555.2| riboflavin biosynthesis protein RibD [Streptococcus pneumoniae
           SP195]
 gi|183571310|gb|EDT91838.1| riboflavin biosynthesis protein RibD [Streptococcus pneumoniae
           SP195]
          Length = 384

 Score =  114 bits (286), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 41/150 (27%), Positives = 59/150 (39%), Gaps = 21/150 (14%)

Query: 3   KGNVFMSCALEEAQN-AALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
             + +M  A++ AQ  A   N  P VGAV V +N II +  +          HAE  A++
Sbjct: 20  SDSKYMKLAIKLAQKGAGYVNPNPMVGAVIVKDNHIIGQGYHEFFGG----PHAERNALK 75

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
             CR           LYVTLEPC        C  AI  + I R+  G+ +        G 
Sbjct: 76  N-CRESP----VGATLYVTLEPCCHFGKTPPCIDAIIDSGITRVVIGSLDCNPIVSGKGV 130

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
           +           ++  GI E     +I+ F
Sbjct: 131 KILEENNL----QVTVGILENECLNLIKSF 156


>gi|168486049|ref|ZP_02710557.1| riboflavin biosynthesis protein RibD [Streptococcus pneumoniae
           CDC1087-00]
 gi|183570882|gb|EDT91410.1| riboflavin biosynthesis protein RibD [Streptococcus pneumoniae
           CDC1087-00]
          Length = 366

 Score =  114 bits (286), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 41/150 (27%), Positives = 59/150 (39%), Gaps = 21/150 (14%)

Query: 3   KGNVFMSCALEEAQN-AALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
             + +M  A++ AQ  A   N  P VGAV V +N II +  +          HAE  A++
Sbjct: 2   SDSKYMKLAIKLAQKGAGYVNPNPMVGAVIVKDNHIIGQGYHEFFGG----PHAERNALK 57

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
             CR           LYVTLEPC        C  AI  + I R+  G+ +        G 
Sbjct: 58  N-CRESP----VGATLYVTLEPCCHFGKTPPCIDAIIDSGITRVVIGSLDCNPIVSGKGV 112

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
           +           ++  GI E     +I+ F
Sbjct: 113 KILEENNL----QVTVGILENECLNLIKSF 138


>gi|148992759|ref|ZP_01822402.1| riboflavin synthase subunit alpha [Streptococcus pneumoniae
           SP9-BS68]
 gi|147928485|gb|EDK79500.1| riboflavin synthase subunit alpha [Streptococcus pneumoniae
           SP9-BS68]
 gi|332075850|gb|EGI86317.1| riboflavin biosynthesis protein RibD [Streptococcus pneumoniae
           GA17570]
          Length = 366

 Score =  114 bits (286), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 41/150 (27%), Positives = 59/150 (39%), Gaps = 21/150 (14%)

Query: 3   KGNVFMSCALEEAQN-AALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
             + +M  A++ AQ  A   N  P VGAV V +N II +  +          HAE  A++
Sbjct: 2   SDSKYMKLAIKLAQKGAGYVNPNPMVGAVIVKDNHIIGQGYHEFFGG----PHAERNALK 57

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
             CR           LYVTLEPC        C  AI  + I R+  G+ +        G 
Sbjct: 58  N-CRESP----VGATLYVTLEPCCHFGKTPPCIDAIIDSGITRVVIGSLDCNPIVSGKGV 112

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
           +           ++  GI E     +I+ F
Sbjct: 113 KILEENNL----QVTVGILENECLNLIKSF 138


>gi|149011050|ref|ZP_01832355.1| riboflavin synthase subunit alpha [Streptococcus pneumoniae
           SP19-BS75]
 gi|149017852|ref|ZP_01834311.1| riboflavin synthase subunit alpha [Streptococcus pneumoniae
           SP23-BS72]
 gi|168492136|ref|ZP_02716279.1| riboflavin biosynthesis protein RibD [Streptococcus pneumoniae
           CDC0288-04]
 gi|225853791|ref|YP_002735303.1| riboflavin biosynthesis protein RibD [Streptococcus pneumoniae JJA]
 gi|237649748|ref|ZP_04524000.1| riboflavin biosynthesis protein RibD [Streptococcus pneumoniae CCRI
           1974]
 gi|237821446|ref|ZP_04597291.1| riboflavin biosynthesis protein RibD [Streptococcus pneumoniae CCRI
           1974M2]
 gi|147764686|gb|EDK71616.1| riboflavin synthase subunit alpha [Streptococcus pneumoniae
           SP19-BS75]
 gi|147931416|gb|EDK82394.1| riboflavin synthase subunit alpha [Streptococcus pneumoniae
           SP23-BS72]
 gi|183573645|gb|EDT94173.1| riboflavin biosynthesis protein RibD [Streptococcus pneumoniae
           CDC0288-04]
 gi|225723048|gb|ACO18901.1| riboflavin biosynthesis protein RibD [Streptococcus pneumoniae JJA]
 gi|301793457|emb|CBW35830.1| riboflavin biosynthesis protein [includes:
           diaminohydroxyphosphoribosylaminopyrimidine deaminase
           and 5-amino-6-(5-phosphoribosylamino)uracil reductase]
           [Streptococcus pneumoniae INV104]
 gi|332077484|gb|EGI87945.1| riboflavin biosynthesis protein RibD [Streptococcus pneumoniae
           GA41301]
 gi|332204191|gb|EGJ18256.1| riboflavin biosynthesis protein RibD [Streptococcus pneumoniae
           GA47901]
          Length = 366

 Score =  114 bits (286), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 41/150 (27%), Positives = 59/150 (39%), Gaps = 21/150 (14%)

Query: 3   KGNVFMSCALEEAQN-AALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
             + +M  A++ AQ  A   N  P VGAV V +N II +  +          HAE  A++
Sbjct: 2   SDSKYMKLAIKLAQKGAGYVNPNPMVGAVIVKDNHIIGQGYHEFFGG----PHAERNALK 57

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
             CR           LYVTLEPC        C  AI  + I R+  G+ +        G 
Sbjct: 58  N-CRESP----VGATLYVTLEPCCHFGKTPPCIDAIIDSGITRVVIGSLDCNPIVSGKGV 112

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
           +           ++  GI E     +I+ F
Sbjct: 113 KILEENNL----QVTVGILENECLNLIKSF 138


>gi|15900115|ref|NP_344719.1| riboflavin biosynthesis protein RibD [Streptococcus pneumoniae
           TIGR4]
 gi|14971645|gb|AAK74359.1| riboflavin biosynthesis protein RibD [Streptococcus pneumoniae
           TIGR4]
          Length = 366

 Score =  114 bits (286), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 41/150 (27%), Positives = 59/150 (39%), Gaps = 21/150 (14%)

Query: 3   KGNVFMSCALEEAQN-AALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
             + +M  A++ AQ  A   N  P VGAV V +N II +  +          HAE  A++
Sbjct: 2   SDSKYMKLAIKLAQKGAGYVNPNPMVGAVIVKDNHIIGQGYHEFFGG----PHAERNALK 57

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
             CR           LYVTLEPC        C  AI  + I R+  G+ +        G 
Sbjct: 58  N-CRESP----VGATLYVTLEPCCHFGKTPPCIDAIIDSGITRVVIGSLDCNPIVSGKGV 112

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
           +           ++  GI E     +I+ F
Sbjct: 113 KILEENNL----QVTVGILENECLNLIKSF 138


>gi|15902208|ref|NP_357758.1| riboflavin biosynthesis protein RibD [Streptococcus pneumoniae R6]
 gi|116515773|ref|YP_815688.1| riboflavin biosynthesis protein RibD [Streptococcus pneumoniae D39]
 gi|148996604|ref|ZP_01824322.1| riboflavin synthase subunit alpha [Streptococcus pneumoniae
           SP11-BS70]
 gi|168576390|ref|ZP_02722273.1| riboflavin biosynthesis protein RibD [Streptococcus pneumoniae
           MLV-016]
 gi|182683162|ref|YP_001834909.1| riboflavin biosynthesis protein RibD [Streptococcus pneumoniae
           CGSP14]
 gi|303255119|ref|ZP_07341195.1| riboflavin biosynthesis protein RibD [Streptococcus pneumoniae
           BS455]
 gi|307066860|ref|YP_003875826.1| pyrimidine reductase, riboflavin biosynthesis [Streptococcus
           pneumoniae AP200]
 gi|15457706|gb|AAK98968.1| Riboflavin biosynthese; a deaminase [Streptococcus pneumoniae R6]
 gi|116076349|gb|ABJ54069.1| riboflavin biosynthesis protein RibD [Streptococcus pneumoniae D39]
 gi|147757179|gb|EDK64218.1| riboflavin synthase subunit alpha [Streptococcus pneumoniae
           SP11-BS70]
 gi|182628496|gb|ACB89444.1| riboflavin biosynthesis protein RibD [Streptococcus pneumoniae
           CGSP14]
 gi|183577789|gb|EDT98317.1| riboflavin biosynthesis protein RibD [Streptococcus pneumoniae
           MLV-016]
 gi|301801129|emb|CBW33802.1| riboflavin biosynthesis protein [includes:
           diaminohydroxyphosphoribosylaminopyrimidine deaminase
           and 5-amino-6-(5-phosphoribosylamino)uracil reductase]
           [Streptococcus pneumoniae INV200]
 gi|302597949|gb|EFL65019.1| riboflavin biosynthesis protein RibD [Streptococcus pneumoniae
           BS455]
 gi|306408397|gb|ADM83824.1| Pyrimidine reductase, riboflavin biosynthesis [Streptococcus
           pneumoniae AP200]
          Length = 366

 Score =  114 bits (286), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 41/150 (27%), Positives = 59/150 (39%), Gaps = 21/150 (14%)

Query: 3   KGNVFMSCALEEAQN-AALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
             + +M  A++ AQ  A   N  P VGAV V +N II +  +          HAE  A++
Sbjct: 2   SDSKYMKLAIKLAQKGAGYVNPNPMVGAVIVKDNHIIGQGYHEFFGG----PHAERNALK 57

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
             CR           LYVTLEPC        C  AI  + I R+  G+ +        G 
Sbjct: 58  N-CRESP----VGATLYVTLEPCCHFGKTPPCIDAIIDSGITRVVIGSLDCNPIVSGKGV 112

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
           +           ++  GI E     +I+ F
Sbjct: 113 KILEENNL----QVTVGILENECLNLIKSF 138


>gi|212709165|ref|ZP_03317293.1| hypothetical protein PROVALCAL_00198 [Providencia alcalifaciens DSM
           30120]
 gi|212688077|gb|EEB47605.1| hypothetical protein PROVALCAL_00198 [Providencia alcalifaciens DSM
           30120]
          Length = 371

 Score =  114 bits (286), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 37/157 (23%), Positives = 59/157 (37%), Gaps = 21/157 (13%)

Query: 1   MKKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           +++  ++M+ A E A+      +  P VG V V + +I+    ++         HAE+ A
Sbjct: 2   LEQDRIYMARAFELAKEGRFTTSPNPNVGCVIVRDGEIVGEGYHQKAGE----PHAEVHA 57

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
           +RM               YVTLEPC        CA A+  A I R+     +P       
Sbjct: 58  LRMAGDKA-----KGATAYVTLEPCSHHGRTPPCAEALINAGISRVVAAMQDPNPQVAGR 112

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
           G      A      E    I  + +  + + F K  R
Sbjct: 113 GLYMLNQAG----IETASNILLEEAEALNRGFLKRMR 145


>gi|83775265|dbj|BAE65387.1| unnamed protein product [Aspergillus oryzae]
          Length = 145

 Score =  114 bits (286), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 30/107 (28%), Positives = 54/107 (50%)

Query: 41  GNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
            +        T HAE +A+    R   + +L    LYVT+EPC MCA+A+   RI+ +Y+
Sbjct: 4   HSCEEADLSGTRHAEFIALERMLRNYPKSLLRSTKLYVTVEPCVMCASALRQYRIQAVYF 63

Query: 101 GASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
           G SN + GG  +    +T  +      +Y G+  + +  +++ F+ +
Sbjct: 64  GCSNERFGGTGSILSLHTDFSIDPPYPVYGGLFSKEAVMLLRRFYIQ 110


>gi|148380824|ref|YP_001255365.1| riboflavin biosynthesis protein RibD [Clostridium botulinum A str.
           ATCC 3502]
 gi|153933315|ref|YP_001385131.1| riboflavin biosynthesis protein RibD [Clostridium botulinum A str.
           ATCC 19397]
 gi|153935215|ref|YP_001388600.1| riboflavin biosynthesis protein RibD [Clostridium botulinum A str.
           Hall]
 gi|148290308|emb|CAL84432.1| riboflavin biosynthesis protein ribd [includes:
           diaminohydroxyphosphoribosylaminopyrimidine deaminase
           and 5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Clostridium botulinum A str. ATCC 3502]
 gi|152929359|gb|ABS34859.1| riboflavin biosynthesis protein RibD [Clostridium botulinum A str.
           ATCC 19397]
 gi|152931129|gb|ABS36628.1| riboflavin biosynthesis protein RibD [Clostridium botulinum A str.
           Hall]
          Length = 365

 Score =  113 bits (285), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 40/156 (25%), Positives = 62/156 (39%), Gaps = 25/156 (16%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56
           M+  N +M  AL+ A+      ++   P VGA+ V NNKII    ++         HAE+
Sbjct: 1   MEDYNFYMEKALKLAERG--EGKVNPNPKVGAIVVNNNKIIGEGYHKYFGG----PHAEV 54

Query: 57  LAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGI 110
            A++               +YVTLEPC        CA +I    I +      +P     
Sbjct: 55  YALKEAGEKA-----KGATIYVTLEPCSHYGKTPPCAESIVKMGISKAIIAMKDPNPLVE 109

Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
             G             E+  GI E+ S+++ + F K
Sbjct: 110 GRGIDILKQNG----IEVITGIMEKESKKLNEVFIK 141


>gi|297622519|ref|YP_003703953.1| riboflavin biosynthesis protein RibD [Truepera radiovictrix DSM
           17093]
 gi|297163699|gb|ADI13410.1| riboflavin biosynthesis protein RibD [Truepera radiovictrix DSM
           17093]
          Length = 393

 Score =  113 bits (285), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 38/150 (25%), Positives = 57/150 (38%), Gaps = 18/150 (12%)

Query: 3   KGNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +   +MS ALE A+           VG V V +++II    +         AHAE+ A++
Sbjct: 11  EHERYMSRALELAERGRGSTAPNPMVGCVIVRDDEIIGEGWHERAGE----AHAEVRALQ 66

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
                     +    LYVTLEPC        C  AI  A +RR+   A +P      +G 
Sbjct: 67  DA--RSRGARVRGATLYVTLEPCNHTGRTPPCTEAILEAGVRRVVIAALDPDPRVDGSGV 124

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
                A      E+  G+    +    + F
Sbjct: 125 ARLQAAG----VEVVTGVLAAEAEAQNEVF 150


>gi|302817816|ref|XP_002990583.1| hypothetical protein SELMODRAFT_448085 [Selaginella moellendorffii]
 gi|300141751|gb|EFJ08460.1| hypothetical protein SELMODRAFT_448085 [Selaginella moellendorffii]
          Length = 1449

 Score =  113 bits (285), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 41/120 (34%), Positives = 62/120 (51%), Gaps = 2/120 (1%)

Query: 2   KKGNVFMSCALEEAQNAALRNEI-PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
            +   F+S A++EA       +  P GAV V NN+++    N      D TAHAE+ A+R
Sbjct: 59  DRDYKFLSKAVDEAYKGVTCGDGGPFGAVVVRNNEVVVSCHNMVLRHTDPTAHAEVTAVR 118

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
             C+ L++  L + +++ + EPC MC  AI L+RI+RL YGA       +     F   A
Sbjct: 119 EACKKLNRLELSDCEIFASCEPCPMCFGAIHLSRIKRLVYGAKAEAAIAVGF-DDFIADA 177


>gi|327405290|ref|YP_004346128.1| riboflavin biosynthesis protein RibD [Fluviicola taffensis DSM
           16823]
 gi|327320798|gb|AEA45290.1| riboflavin biosynthesis protein RibD [Fluviicola taffensis DSM
           16823]
          Length = 347

 Score =  113 bits (285), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 38/156 (24%), Positives = 65/156 (41%), Gaps = 27/156 (17%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEI-----P-VGAVAVLNNKIISRAGNRNRELKDVTAHA 54
           M     +M  AL+ A+       I     P VGAV V N +II    ++        AHA
Sbjct: 1   MNLDEKYMLRALQLAK----SGGISVAPNPLVGAVIVHNQQIIGEGYHQKYGE----AHA 52

Query: 55  EILAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGG 108
           E+ A+     +  + +L E  +YVTLEPC        CA  +  ++ +R+     +P   
Sbjct: 53  EVNAVNS---VKDKSLLSESTIYVTLEPCSHFGKTPPCADLLVHSQFKRVVIAQIDPFSE 109

Query: 109 GIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
               G +       +   ++  GI E  ++++ + F
Sbjct: 110 VAGRGIEKLK----NAGIQVDCGILESEAKELNKRF 141


>gi|329298304|ref|ZP_08255640.1| riboflavin biosynthesis protein RibD [Plautia stali symbiont]
          Length = 367

 Score =  113 bits (285), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 36/155 (23%), Positives = 55/155 (35%), Gaps = 21/155 (13%)

Query: 3   KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
               +M+ ALE A+         P VG V V + +I+    ++         HAE+ A+R
Sbjct: 2   TDAHYMARALELARRGQYTTTPNPNVGCVIVRDGEIVGEGWHQRAGE----PHAEVHALR 57

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           M               YVTLEPC        C  A+  A + R+     +P       G 
Sbjct: 58  MAGDHAC-----GATAYVTLEPCSHHGRTPPCCDALIAAGVSRVVAAMQDPNPQVAGRGL 112

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
                A      E+  G+    +  + + F K  R
Sbjct: 113 YRLQQAG----IEVSHGLMMNEAEALNRGFLKRMR 143


>gi|159901995|gb|ABX10725.1| cytidine and deoxycytidylate deaminase family protein [uncultured
           planctomycete 13FN]
          Length = 164

 Score =  113 bits (285), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 39/147 (26%), Positives = 59/147 (40%), Gaps = 13/147 (8%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAIR 60
                M  A+E A+        P GAV V   +  I++   NR    K+ T HAEI  I 
Sbjct: 5   NHESSMRHAIEVAKANPRH---PFGAVIVSSASEVIVAEGVNR--SSKNPTLHAEIDVIN 59

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNP---KGGGIENGTQFY 117
                        + LY T EPC MC +AI  + ++ + YG S P   + G  +   +  
Sbjct: 60  NYAASGGT-DWHRLTLYTTAEPCPMCMSAILWSGVKSIVYGTSIPTLVRLGWDQIDIRAT 118

Query: 118 TLATCHHSP--EIYPGISEQRSRQIIQ 142
            +A   H    E+ PG+       + +
Sbjct: 119 EVAAKSHQTSCEVIPGVLVSECDALFR 145


>gi|261876153|ref|YP_695000.2| riboflavin biosynthesis protein RibD [Clostridium perfringens ATCC
           13124]
 gi|255529887|gb|ABG83871.2| riboflavin biosynthesis protein RibD [Clostridium perfringens ATCC
           13124]
          Length = 371

 Score =  113 bits (285), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 37/149 (24%), Positives = 55/149 (36%), Gaps = 21/149 (14%)

Query: 4   GNVFMSCALEEAQNAAL-RNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
              FM  ALE A+      N  P VGAV V   +II +  +          HAEI AI  
Sbjct: 8   DEFFMKKALELARKGEGYVNPNPLVGAVIVKGGEIIGQGYHEFFGGN----HAEINAINS 63

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
             +           +YVTLEPC        C  AI   + +R+  G  +          +
Sbjct: 64  SIKST-----EGATIYVTLEPCCHYGKTPPCIEAIIKNKFKRVVVGTLDQNPLVSGKSIK 118

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDF 144
               +      E+  G+ E+   ++ + F
Sbjct: 119 ILRESG----IEVKVGVLEKECIRLNEIF 143


>gi|168216370|ref|ZP_02641995.1| riboflavin biosynthesis protein RibD [Clostridium perfringens NCTC
           8239]
 gi|182381291|gb|EDT78770.1| riboflavin biosynthesis protein RibD [Clostridium perfringens NCTC
           8239]
          Length = 365

 Score =  113 bits (285), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 37/149 (24%), Positives = 55/149 (36%), Gaps = 21/149 (14%)

Query: 4   GNVFMSCALEEAQNAAL-RNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
              FM  ALE A+      N  P VGAV V   +II +  +          HAEI AI  
Sbjct: 2   DEFFMKKALELARKGEGYVNPNPLVGAVIVKGGEIIGQGYHEFFGGN----HAEINAINS 57

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
             +           +YVTLEPC        C  AI   + +R+  G  +          +
Sbjct: 58  SIKST-----EGATIYVTLEPCCHYGKTPPCIEAIIKNKFKRVVVGTLDQNPLVSGKSIK 112

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDF 144
               +      E+  G+ E+   ++ + F
Sbjct: 113 ILRESG----IEVKVGVLEKECIRLNEIF 137


>gi|41406760|ref|NP_959596.1| hypothetical protein MAP0662c [Mycobacterium avium subsp.
           paratuberculosis K-10]
 gi|118463808|ref|YP_880050.1| cytidine/deoxycytidylate deaminase [Mycobacterium avium 104]
 gi|41395110|gb|AAS02979.1| hypothetical protein MAP_0662c [Mycobacterium avium subsp.
           paratuberculosis K-10]
 gi|118165095|gb|ABK65992.1| cytidine/deoxycytidylate deaminase [Mycobacterium avium 104]
          Length = 166

 Score =  113 bits (285), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 29/94 (30%), Positives = 45/94 (47%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           F    ++ A+        P   V V + ++++ + N+  +  D TAHAEILAIR  C  L
Sbjct: 4   FARRTIDLARQNVAEGGRPFATVIVQDGEVLAESANKAAQTNDPTAHAEILAIRAACLKL 63

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
             E L +  +YV   PC MC  A+     R + +
Sbjct: 64  GTEHLVDATIYVLAHPCPMCLGALYYCSPREVIF 97


>gi|323191332|gb|EFZ76595.1| riboflavin biosynthesis protein RibD [Escherichia coli RN587/1]
          Length = 367

 Score =  113 bits (285), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 36/155 (23%), Positives = 57/155 (36%), Gaps = 21/155 (13%)

Query: 3   KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +   +M+ AL+ AQ      +  P VG V V + +I+    +          HAE+ A+R
Sbjct: 2   QDEYYMARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHHRAGE----PHAEVHALR 57

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           M               YVTLEPC        C  A+  A + R+     +P       G 
Sbjct: 58  MAGEKA-----KGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVASMQDPNPQVAGRGL 112

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
                A      ++  G+    + Q+ + F K  R
Sbjct: 113 YRLQQAG----IDVSHGLMMSEAEQLNKGFLKRMR 143


>gi|295704047|ref|YP_003597122.1| riboflavin biosynthesis protein RibD [Bacillus megaterium DSM 319]
 gi|294801706|gb|ADF38772.1| riboflavin biosynthesis protein RibD [Bacillus megaterium DSM 319]
          Length = 363

 Score =  113 bits (285), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 42/152 (27%), Positives = 68/152 (44%), Gaps = 21/152 (13%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           M     +M+ AL+ A++   + E  P VG+V V +N+I+    +          HAEI A
Sbjct: 1   MINHEFYMNIALQNARSTKGQTEPNPLVGSVIVNDNRIVGIGTHLKAGE----PHAEIHA 56

Query: 59  IRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIEN 112
           +RM       E       YVTLEPC+       CA A+  A ++++     +P      N
Sbjct: 57  LRMAG-----EQAKGATAYVTLEPCSHHGRTGPCAEALVEAGVKKVVIATLDPNPLVAGN 111

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
           G +       +   E+  G+ E+ SRQ+ + F
Sbjct: 112 GVEILK----NAGIEVITGVCEEESRQMNEVF 139


>gi|89891631|ref|ZP_01203135.1| riboflavin biosynthesis protein RibD [Flavobacteria bacterium
           BBFL7]
 gi|89516178|gb|EAS18841.1| riboflavin biosynthesis protein RibD [Flavobacteria bacterium
           BBFL7]
          Length = 337

 Score =  113 bits (285), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 41/160 (25%), Positives = 63/160 (39%), Gaps = 20/160 (12%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVL-NNKIISRAGNRNRELKDVTAHAEI 56
           M   + +M   L+ AQN       P   VG+V V  N++II    +    LK    HAE+
Sbjct: 1   MTTEDKYMQRCLQLAQNGLGTT-YPNPLVGSVIVSENDEIIGEGWH----LKSGEPHAEV 55

Query: 57  LAIRMGCRILSQEI-LPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGG 109
            A+R   +         +  +YV LEPC        CA+ I     +++  G  +P    
Sbjct: 56  NAVRDAEKKGYDGDAFAKATIYVNLEPCSHTGKTPPCASMIVQKGFKKVVVGTLDPHDKV 115

Query: 110 IENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
              G      A      E+  GI E+   ++ + FF   R
Sbjct: 116 AGKGITIIEKAG----IEVVVGILEKECNELNKRFFTFHR 151


>gi|58578775|ref|YP_196987.1| riboflavin biosynthesis protein ribD [Ehrlichia ruminantium str.
           Welgevonden]
 gi|58417401|emb|CAI26605.1| Riboflavin biosynthesis protein ribD [Ehrlichia ruminantium str.
           Welgevonden]
          Length = 370

 Score =  113 bits (285), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 36/152 (23%), Positives = 58/152 (38%), Gaps = 25/152 (16%)

Query: 4   GNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
              FMS AL  A+       +   P VG + V +  ++ R   +         HAEI+A+
Sbjct: 10  DKKFMSLALRLARRGL--GNVFPNPAVGCIIVNDGVVVGRGWTQVGGR----PHAEIVAL 63

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENG 113
                +           YVTLEPC+       C   +  A I+R+    ++P      NG
Sbjct: 64  DNVKHLA-----KGATAYVTLEPCSHYGKTGPCVLNLINAGIKRVVIATNDPDMRVSGNG 118

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
            +    A      E+  G+ +  +R +   FF
Sbjct: 119 IKLLRDAN----VEVRCGVMDNEARALNIGFF 146


>gi|57238845|ref|YP_179981.1| riboflavin biosynthesis protein ribD [Ehrlichia ruminantium str.
           Welgevonden]
 gi|57160924|emb|CAH57829.1| riboflavin biosynthesis protein RibD [Ehrlichia ruminantium str.
           Welgevonden]
          Length = 365

 Score =  113 bits (285), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 36/152 (23%), Positives = 58/152 (38%), Gaps = 25/152 (16%)

Query: 4   GNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
              FMS AL  A+       +   P VG + V +  ++ R   +         HAEI+A+
Sbjct: 5   DKKFMSLALRLARRGL--GNVFPNPAVGCIIVNDGVVVGRGWTQVGGR----PHAEIVAL 58

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENG 113
                +           YVTLEPC+       C   +  A I+R+    ++P      NG
Sbjct: 59  DNVKHLA-----KGATAYVTLEPCSHYGKTGPCVLNLINAGIKRVVIATNDPDMRVSGNG 113

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
            +    A      E+  G+ +  +R +   FF
Sbjct: 114 IKLLRDAN----VEVRCGVMDNEARALNIGFF 141


>gi|307609878|emb|CBW99403.1| hypothetical protein LPW_11791 [Legionella pneumophila 130b]
          Length = 154

 Score =  113 bits (285), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 31/94 (32%), Positives = 46/94 (48%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           F+   +E A+        P   + V N KI++ A N   +  D TAHAE+ AIR+    L
Sbjct: 3   FIKRTIELARENVEHGGRPFACLIVQNGKILAEATNTVAQTHDPTAHAEVNAIRIATAKL 62

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
             E L + D Y+   PC MC AA+     R++ +
Sbjct: 63  GCEHLYDCDFYILAHPCPMCLAAMYYCSPRKVIF 96


>gi|327312630|ref|YP_004328067.1| riboflavin biosynthesis protein RibD [Prevotella denticola F0289]
 gi|326946400|gb|AEA22285.1| riboflavin biosynthesis protein RibD [Prevotella denticola F0289]
          Length = 380

 Score =  113 bits (285), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 37/152 (24%), Positives = 61/152 (40%), Gaps = 18/152 (11%)

Query: 2   KKGNVFMSCALEEAQNA--ALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILA 58
           K   ++M   L+ A+N     +    VGAV V  + +II    +          HAE+ A
Sbjct: 5   KTDEIYMRRCLQLARNGQQLAKPNPMVGAVIVSKDGRIIGEGYHVRCGEG----HAEVNA 60

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
                R   + +L E  +YV+LEPC        CA  I    +RR+  G  +P       
Sbjct: 61  F-ASVRKEDEALLHEATVYVSLEPCSHYGKTPPCADLIISKGVRRVVCGCIDPFSKVQGR 119

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
           G +    A      ++  G+ E+   ++ + F
Sbjct: 120 GVKRLREAG----IDVTVGVLEKECLELNKRF 147


>gi|227893613|ref|ZP_04011418.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Lactobacillus ultunensis DSM 16047]
 gi|227864473|gb|EEJ71894.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Lactobacillus ultunensis DSM 16047]
          Length = 352

 Score =  113 bits (285), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 42/153 (27%), Positives = 69/153 (45%), Gaps = 21/153 (13%)

Query: 1   MKKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           M+K   +M+ AL+EA+       + P VGAV V NN++++   + +        HAE  A
Sbjct: 1   MEKDQYYMNLALQEAKKGRFQTWKNPMVGAVIVKNNQVLATGHHIHYGQN----HAERDA 56

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
           I      L+ E L    LYVTLEPC        C+  I  ++I+R+  G  +P       
Sbjct: 57  I----SKLTPEQLFNSTLYVTLEPCNHYGKQPPCSDLIVKSKIKRVVIGQVDPHKLVTGK 112

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
           G          H+ E+  G+   +  ++ + F+
Sbjct: 113 GIAKLKS----HNIEVKTGVLTSKIEELNK-FY 140


>gi|318042353|ref|ZP_07974309.1| putative cytosine deaminase [Synechococcus sp. CB0101]
          Length = 144

 Score =  113 bits (285), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 33/103 (32%), Positives = 46/103 (44%), Gaps = 4/103 (3%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  A +EAQ + +   IP+GAV    +  I++R  N+  +  D T+H E   IR   R  
Sbjct: 5   MDAARQEAQQSWMEGGIPIGAVLAREDGTIVARGHNQRVQNGDPTSHGETQCIRNAGRRR 64

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109
                 ++ L  TL PC MCA    L   RR+  G      G 
Sbjct: 65  ---DWRDLTLVTTLSPCPMCAGTAVLLGFRRVLIGERRSFQGA 104


>gi|221066605|ref|ZP_03542710.1| CMP/dCMP deaminase zinc-binding [Comamonas testosteroni KF-1]
 gi|220711628|gb|EED66996.1| CMP/dCMP deaminase zinc-binding [Comamonas testosteroni KF-1]
          Length = 146

 Score =  113 bits (285), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 27/100 (27%), Positives = 46/100 (46%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M  A+  A    L+   P GAV    N++++   N      D + HAE+ AIR G +  +
Sbjct: 1   MRLAVNLAHANRLQGGRPFGAVLAQGNEVVATGVNEIIASHDPSTHAEMQAIRAGTQQRA 60

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKG 107
              L  + +Y +  PC MC AA+ +    ++++   N   
Sbjct: 61  NPSLAGLSIYASGHPCPMCLAALVMNGAEQVFFAFDNQDA 100


>gi|297201565|ref|ZP_06918962.1| cytidine/deoxycytidine deaminase [Streptomyces sviceus ATCC 29083]
 gi|197711065|gb|EDY55099.1| cytidine/deoxycytidine deaminase [Streptomyces sviceus ATCC 29083]
          Length = 152

 Score =  113 bits (285), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 34/143 (23%), Positives = 59/143 (41%), Gaps = 13/143 (9%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           + + +++ A+EEA+       IP+GA     +  ++ R  NR  +  D + HAE  A R 
Sbjct: 8   QAHRWLATAVEEARAGLAEGGIPIGAALYGADGTLLGRGHNRRVQDGDPSLHAETAAFRA 67

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
             R  S        +  TL PC  C+  +    I R+  G +    GG +   +      
Sbjct: 68  AGRQRS---YRGTTMVTTLSPCWYCSGLVRQFGIGRVVVGEATTFHGGHDWLAE------ 118

Query: 122 CHHSPEIYPGISEQRSRQIIQDF 144
             H  EI   + +    +++ DF
Sbjct: 119 --HGVEIVL-VDDPECVRMMTDF 138


>gi|76160949|gb|ABA40438.1| unknown [Solanum tuberosum]
          Length = 186

 Score =  113 bits (285), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 41/112 (36%), Positives = 62/112 (55%), Gaps = 1/112 (0%)

Query: 2   KKGNVFMSCALEEAQNAALRNEI-PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
            + + F++ A+EEA       +  P GAV V NN+++    N   +  D TAHAE+ A+R
Sbjct: 29  DRDHKFLTQAVEEAYKGVECGDGGPFGAVVVCNNEVVVSCHNMVLKHTDPTAHAEVTAVR 88

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN 112
             C+ L++  L + ++Y + EPC MC  AI L+RI+RL YGA       I  
Sbjct: 89  EACKKLNRIELADCEIYASCEPCPMCFGAIHLSRIKRLVYGAKAEAAIAIGF 140


>gi|255038066|ref|YP_003088687.1| riboflavin biosynthesis protein RibD [Dyadobacter fermentans DSM
           18053]
 gi|254950822|gb|ACT95522.1| riboflavin biosynthesis protein RibD [Dyadobacter fermentans DSM
           18053]
          Length = 354

 Score =  113 bits (285), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 41/155 (26%), Positives = 65/155 (41%), Gaps = 20/155 (12%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56
           M+  N +M  AL+ A     R  +   P VG V V + +II    +R         HAE+
Sbjct: 1   METDNQWMERALQLA--GYGRGAVSPNPMVGCVIVHDGRIIGEGWHRAYGG----PHAEV 54

Query: 57  LAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGI 110
            AI       +  +LP+   YVTLEPC        CA  +   R++R+    ++P     
Sbjct: 55  RAIEDTDARGNSHLLPQATAYVTLEPCSHTGKTPPCADLLVSRRLKRVVICNNDPNPLVS 114

Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
             G +    A      E+  G++E    ++ + FF
Sbjct: 115 GRGIRRLREAG----IEVECGVAEAAGTELNKRFF 145


>gi|269792620|ref|YP_003317524.1| riboflavin biosynthesis protein RibD [Thermanaerovibrio
           acidaminovorans DSM 6589]
 gi|269100255|gb|ACZ19242.1| riboflavin biosynthesis protein RibD [Thermanaerovibrio
           acidaminovorans DSM 6589]
          Length = 377

 Score =  113 bits (285), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 37/152 (24%), Positives = 56/152 (36%), Gaps = 21/152 (13%)

Query: 4   GNVFMSCALEEA-QNAALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
              FM  AL  A +     +  P VG V V + +++    ++         HAE+ A+ M
Sbjct: 18  HGYFMRMALSLAIRGGTAVSPNPKVGCVIVKDGQVVGWGYHKRYGG----PHAEVEALTM 73

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
                  +       YVTLEPC        CA  +  A IRR+ YG  +P       G +
Sbjct: 74  AG-----DRAQGATAYVTLEPCSHHGKTPPCAPRLVEAGIRRVVYGMMDPNPKVNGRGLE 128

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
                      E+   + E R R   + F + 
Sbjct: 129 ILASGG----VEVVGPVMEDRCRWENRGFIRR 156


>gi|332341777|gb|AEE55111.1| riboflavin biosynthesis protein RibD [Escherichia coli UMNK88]
          Length = 367

 Score =  113 bits (285), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 36/155 (23%), Positives = 57/155 (36%), Gaps = 21/155 (13%)

Query: 3   KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +   +M+ AL+ AQ      +  P VG V V + +I+    +          HAE+ A+R
Sbjct: 2   QDEYYMARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHHRAGE----PHAEVHALR 57

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           M               YVTLEPC        C  A+  A + R+     +P       G 
Sbjct: 58  MAGEKA-----KGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVASMQDPNPQVAGRGL 112

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
                A      ++  G+    + Q+ + F K  R
Sbjct: 113 YRLQQAG----IDVSHGLMMSEAEQLNKGFLKRMR 143


>gi|315634417|ref|ZP_07889704.1| riboflavin biosynthesis protein RibD [Aggregatibacter segnis ATCC
           33393]
 gi|315477007|gb|EFU67752.1| riboflavin biosynthesis protein RibD [Aggregatibacter segnis ATCC
           33393]
          Length = 374

 Score =  113 bits (285), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 36/159 (22%), Positives = 61/159 (38%), Gaps = 29/159 (18%)

Query: 3   KGNVFMSCALEEAQNAALRNE---IP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56
           +   FM  AL+ A+    + E    P   VG V V + +++ +  +          HAE+
Sbjct: 8   QDAAFMQLALDLAK----QGEFTTTPNPSVGCVLVKDGEVVGKGFHAKAGE----PHAEV 59

Query: 57  LAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGI 110
           +A+R                YVTLEPC        CA  +  A + ++     +P     
Sbjct: 60  MALREAGEKA-----RGATAYVTLEPCSHFGRTPPCAKGLVEAGVSKVIAAMCDPNPQVA 114

Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             G Q  + A    +     G+ E+ + Q+ + F K  R
Sbjct: 115 GKGLQILSDAGIQSAV----GLLEENAEQLNKGFLKRMR 149


>gi|288904903|ref|YP_003430125.1| riboflavin-specific deaminase [Streptococcus gallolyticus UCN34]
 gi|288731629|emb|CBI13184.1| riboflavin-specific deaminase [Streptococcus gallolyticus UCN34]
          Length = 351

 Score =  113 bits (285), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 39/145 (26%), Positives = 59/145 (40%), Gaps = 19/145 (13%)

Query: 4   GNVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
              +M+ A+ EA+    +      VGAV V N ++I+R  +     +    HAE  AI  
Sbjct: 2   HENYMAQAIAEAKKGFRQTYTNPLVGAVIVKNGRVIARGAHLQYGHE----HAEKNAI-- 55

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
                + E L    LYVTLEPC        C  AI  A I+++  G  +P       G +
Sbjct: 56  -LHCEAPEELTNSTLYVTLEPCHHTGKQPPCTQAIVEAGIKKVVVGQLDPNPLVAGKGLE 114

Query: 116 FYTLATCHHSPEIYPGISEQRSRQI 140
           F          E+   + E  +R +
Sbjct: 115 FLKSQG----IEVVTQVLENEARAL 135


>gi|95929567|ref|ZP_01312309.1| riboflavin biosynthesis protein RibD [Desulfuromonas acetoxidans
           DSM 684]
 gi|95134264|gb|EAT15921.1| riboflavin biosynthesis protein RibD [Desulfuromonas acetoxidans
           DSM 684]
          Length = 364

 Score =  113 bits (285), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 41/147 (27%), Positives = 62/147 (42%), Gaps = 21/147 (14%)

Query: 8   MSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M  AL+ A+ A  R     PVGAV V + +++ R  +          HAE+ A+R     
Sbjct: 1   MQIALDLARKALGRTTPNPPVGAVIVRDGQVVGRGFHPKAGE----PHAEVFALRDAA-- 54

Query: 66  LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
              +     D YVTLEPC        C  A+  A + R++ G  +P       G +    
Sbjct: 55  ---DQARGADAYVTLEPCSHHGRTPPCCEALIAAGVSRVFVGLIDPNPQVSGQGVERLRA 111

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFK 146
           A      E+  G+ E + R++I  F K
Sbjct: 112 AG----VEVEVGVLETQCRRLIAPFIK 134


>gi|281357052|ref|ZP_06243542.1| riboflavin biosynthesis protein RibD [Victivallis vadensis ATCC
           BAA-548]
 gi|281316610|gb|EFB00634.1| riboflavin biosynthesis protein RibD [Victivallis vadensis ATCC
           BAA-548]
          Length = 346

 Score =  113 bits (285), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 42/151 (27%), Positives = 57/151 (37%), Gaps = 18/151 (11%)

Query: 4   GNVFMSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
              FM  AL  A+         P VGAV V + +II R  +          HAEI A+  
Sbjct: 8   DQKFMLEALALARMGWGLTSPNPMVGAVIVRDGEIIGRGYHCKAGE----PHAEINALID 63

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
             +           +YVTLEPC        C  AI  A I R+  G+ +P       G Q
Sbjct: 64  VEKH--GLDAKGATIYVTLEPCSTVGRTPACTDAIRAAGISRVVIGSLDPNPKHAGRGVQ 121

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
               A      ++  G+      +I + FFK
Sbjct: 122 LLEEAG----IQVTVGVERAACGEINRPFFK 148


>gi|163783070|ref|ZP_02178065.1| riboflavin specific deaminase [Hydrogenivirga sp. 128-5-R1-1]
 gi|159881750|gb|EDP75259.1| riboflavin specific deaminase [Hydrogenivirga sp. 128-5-R1-1]
          Length = 362

 Score =  113 bits (285), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 36/147 (24%), Positives = 56/147 (38%), Gaps = 21/147 (14%)

Query: 7   FMSCALEEA--QNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           +MS AL  A  +         VG V V   +I+    +          HAE++A+     
Sbjct: 6   YMSLALSLAKRRKGLTHPNPTVGCVVVNEGEIVGLGYH--EGAGHP--HAEVVALEQAGE 61

Query: 65  ILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
                      LYVTLEPC        C  A+  A IR+      +P       G +   
Sbjct: 62  KA-----KGSTLYVTLEPCTHFGRTPPCTDALIRAGIRKAVVAVKDPNPVVGGKGIERLR 116

Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFF 145
            A      ++  G+ E+ +R++ +DFF
Sbjct: 117 EAGL----DVEVGVLEEEARELNEDFF 139


>gi|118445111|ref|YP_879181.1| riboflavin biosynthesis protein RibD [Clostridium novyi NT]
 gi|118135567|gb|ABK62611.1| riboflavin biosynthesis protein RibD [Clostridium novyi NT]
          Length = 377

 Score =  113 bits (285), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 39/150 (26%), Positives = 61/150 (40%), Gaps = 23/150 (15%)

Query: 6   VFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
            FM  A+E ++        P   VGAV V +NKII +  +         AHAE+ A++  
Sbjct: 9   KFMKKAIELSKLGVGYT-YPNPLVGAVIVKDNKIIGQGYHERFGG----AHAEVNALKNA 63

Query: 63  CRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116
                 E +    +YVTLEPC        CA  I  + I+ +  G  +P       G   
Sbjct: 64  -----TEDVTGATMYVTLEPCSHYGKTPPCANTIVKSGIKEVIVGMRDPNELVAGRGINI 118

Query: 117 YTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
                     ++  G+ E+  ++I + F K
Sbjct: 119 LKENG----IKVIVGVFEEEIKKINEIFIK 144


>gi|296166409|ref|ZP_06848841.1| possible guanine deaminase [Mycobacterium parascrofulaceum ATCC
           BAA-614]
 gi|295898170|gb|EFG77744.1| possible guanine deaminase [Mycobacterium parascrofulaceum ATCC
           BAA-614]
          Length = 166

 Score =  113 bits (284), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 27/94 (28%), Positives = 44/94 (46%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           F    +E A+        P   V V + ++++ + N   +  D TAHAEILAIR  C  L
Sbjct: 4   FARRTIELARRNVADGGRPFATVIVNDGEVLAESANMVAQANDPTAHAEILAIREACMKL 63

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
             E L +  +Y+   PC MC  ++     + + +
Sbjct: 64  GTEHLVDSTVYLMAHPCPMCLGSLYYCSPKEVIF 97


>gi|254392686|ref|ZP_05007860.1| guanine deaminase [Streptomyces clavuligerus ATCC 27064]
 gi|326439435|ref|ZP_08214169.1| Guanine deaminase [Streptomyces clavuligerus ATCC 27064]
 gi|197706347|gb|EDY52159.1| guanine deaminase [Streptomyces clavuligerus ATCC 27064]
          Length = 187

 Score =  113 bits (284), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 34/134 (25%), Positives = 53/134 (39%), Gaps = 31/134 (23%)

Query: 1   MKKGNVFMSCALEEAQNAALRN-EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
           M K   FM+ A   A  + +     P GAV   N++I++R  NR     D TAH E+ AI
Sbjct: 1   MAKRKKFMAEAARLATESVVNGWGGPFGAVITKNDEIVARGQNRVLLTGDPTAHGEVEAI 60

Query: 60  RMGCRILSQE------------------------------ILPEVDLYVTLEPCTMCAAA 89
           R   ++L+                                +L   ++Y +  PC MC +A
Sbjct: 61  RKAIQVLNPWAPSIPETHQNTSTLKLIRAEPSDLLPKRARMLKGCEIYTSGAPCPMCMSA 120

Query: 90  ISLARIRRLYYGAS 103
           I  +R   +Y+   
Sbjct: 121 IYWSRCDAVYFSCD 134


>gi|154686573|ref|YP_001421734.1| hypothetical protein RBAM_021420 [Bacillus amyloliquefaciens FZB42]
 gi|154352424|gb|ABS74503.1| RibD [Bacillus amyloliquefaciens FZB42]
          Length = 371

 Score =  113 bits (284), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 41/150 (27%), Positives = 62/150 (41%), Gaps = 25/150 (16%)

Query: 5   NVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
             +M+ A+E A+      +    P VGAV V N +I+    +         AHAE+ AI 
Sbjct: 3   EYYMNTAIELARRG--EGQTQSNPLVGAVVVKNGQIVGMGAHLQYGE----AHAEVHAIH 56

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           M  R          DLYVTLEPC        CA  I  + I+R++    +P       G 
Sbjct: 57  MAGRHA-----KGADLYVTLEPCSHYGKTPPCAELIIKSGIKRVFIAVKDPNPLVAGKGI 111

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
                A      E+  G+  Q++ ++ + F
Sbjct: 112 GMLEAAG----IEVKTGLLRQQAEELNKMF 137


>gi|331681807|ref|ZP_08382440.1| riboflavin biosynthesis protein RibD [Escherichia coli H299]
 gi|331081009|gb|EGI52174.1| riboflavin biosynthesis protein RibD [Escherichia coli H299]
          Length = 367

 Score =  113 bits (284), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 36/155 (23%), Positives = 57/155 (36%), Gaps = 21/155 (13%)

Query: 3   KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +   +M+ AL+ AQ      +  P VG V V + +I+    +          HAE+ A+R
Sbjct: 2   QDEYYMARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHHRAGE----PHAEVHALR 57

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           M               YVTLEPC        C  A+  A + R+     +P       G 
Sbjct: 58  MAGEKA-----KGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVASMQDPNPQVAGRGL 112

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
                A      ++  G+    + Q+ + F K  R
Sbjct: 113 YRLQQAG----IDVSHGLMMSEAEQLNKGFLKRMR 143


>gi|293392571|ref|ZP_06636891.1| riboflavin biosynthesis protein RibD [Serratia odorifera DSM 4582]
 gi|291424973|gb|EFE98182.1| riboflavin biosynthesis protein RibD [Serratia odorifera DSM 4582]
          Length = 370

 Score =  113 bits (284), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 37/157 (23%), Positives = 56/157 (35%), Gaps = 21/157 (13%)

Query: 1   MKKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           M    ++M+ A E A+         P VG V V + +I+    +          HAE+ A
Sbjct: 1   MHNDELYMARAFELARLGRFTTAPNPNVGCVIVRDGQIVGEGYHLRAGE----PHAEVHA 56

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
           +RM  +            YVTLEPC        CA A+  A + R+     +P       
Sbjct: 57  LRMAGK-----RARGATAYVTLEPCSHHGRTPPCADALIDAGVSRVVAAMQDPNPQVAGR 111

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
           G      A      E+  G+    +  +   F K  R
Sbjct: 112 GLYKLQQAG----IEVRHGLMLAEAEAVNLGFLKRMR 144


>gi|294054578|ref|YP_003548236.1| riboflavin biosynthesis protein RibD [Coraliomargarita akajimensis
           DSM 45221]
 gi|293613911|gb|ADE54066.1| riboflavin biosynthesis protein RibD [Coraliomargarita akajimensis
           DSM 45221]
          Length = 369

 Score =  113 bits (284), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 40/147 (27%), Positives = 58/147 (39%), Gaps = 20/147 (13%)

Query: 2   KKGNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
            +   +M+ AL+ A            VGAV V +  I++   +          HAEI A+
Sbjct: 6   SEHEFYMARALKLAAQGWGTTHPNPMVGAVIVEDGAIVAEGWHT--AAGQP--HAEIEAL 61

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENG 113
               R  +     +  LYVTLEPC+       C  AI  A I+ +  GA++P      NG
Sbjct: 62  AALGRAPA----SDAVLYVTLEPCSTSGRTGACTDAILRAGIQNVVIGATDPNPDHAGNG 117

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQI 140
                 A  H    +  GI EQ    +
Sbjct: 118 LDLLREAGVH----VQAGILEQECDDL 140


>gi|145223166|ref|YP_001133844.1| CMP/dCMP deaminase, zinc-binding [Mycobacterium gilvum PYR-GCK]
 gi|145215652|gb|ABP45056.1| CMP/dCMP deaminase, zinc-binding protein [Mycobacterium gilvum
           PYR-GCK]
          Length = 146

 Score =  113 bits (284), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 32/140 (22%), Positives = 55/140 (39%), Gaps = 13/140 (9%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +  A+EEA+       IP+GA     +  ++    NR  +L D + HAE  A R   R  
Sbjct: 7   LDVAVEEARKGLAEGGIPIGAALFAADGTLLGSGHNRRVQLDDPSLHAETDAFRNAGRQR 66

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
                    +  TL PC  C+  +    I  +  G S    GG +   +        H  
Sbjct: 67  G---YRSTTMVTTLSPCWYCSGLVRQFNIGTVVIGESRTFTGGHDWLAE--------HGV 115

Query: 127 EIYPGISEQRSRQIIQDFFK 146
           ++   + ++R   +++DF  
Sbjct: 116 KVTV-VDDERCVTLMRDFIA 134


>gi|153954787|ref|YP_001395552.1| hypothetical protein CKL_2169 [Clostridium kluyveri DSM 555]
 gi|219855247|ref|YP_002472369.1| hypothetical protein CKR_1904 [Clostridium kluyveri NBRC 12016]
 gi|146347645|gb|EDK34181.1| RibD [Clostridium kluyveri DSM 555]
 gi|219568971|dbj|BAH06955.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 369

 Score =  113 bits (284), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 39/153 (25%), Positives = 59/153 (38%), Gaps = 21/153 (13%)

Query: 2   KKGNVFMSCALEEAQNAAL-RNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
            K   +M  ALE A       N  P VGA+ V    I+ R  ++         HAE+ A+
Sbjct: 5   NKDEHYMEIALELASKGEGFVNPNPQVGALVVKEGNIVGRGYHKFYGG----PHAEVYAL 60

Query: 60  RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113
           +               +YVTLEPC        C  AI  A I+++     +P       G
Sbjct: 61  KEAGDKA-----AGGQIYVTLEPCSHYGKTPPCVEAIVRAGIKKVVVALKDPNPLVSGRG 115

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
            +F      +   E+  G+ E+ +  I + F K
Sbjct: 116 IEFLR----NKGIEVVTGVLEKEALNINEIFIK 144


>gi|301022597|ref|ZP_07186469.1| riboflavin biosynthesis protein RibD [Escherichia coli MS 69-1]
 gi|300397478|gb|EFJ81016.1| riboflavin biosynthesis protein RibD [Escherichia coli MS 69-1]
          Length = 367

 Score =  113 bits (284), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 36/155 (23%), Positives = 57/155 (36%), Gaps = 21/155 (13%)

Query: 3   KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +   +M+ AL+ AQ      +  P VG V V + +I+    +          HAE+ A+R
Sbjct: 2   QDEYYMARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHHRAGE----PHAEVHALR 57

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           M               YVTLEPC        C  A+  A + R+     +P       G 
Sbjct: 58  MAGEKA-----KGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVASMQDPNPQVAGRGL 112

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
                A      ++  G+    + Q+ + F K  R
Sbjct: 113 YRLQQAG----IDVSHGLMMSEAEQLNKGFLKRMR 143


>gi|147678096|ref|YP_001212311.1| pyrimidine reductase and pyrimidine deaminase [Pelotomaculum
           thermopropionicum SI]
 gi|146274193|dbj|BAF59942.1| pyrimidine reductase and Pyrimidine deaminase [Pelotomaculum
           thermopropionicum SI]
          Length = 376

 Score =  113 bits (284), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 42/152 (27%), Positives = 63/152 (41%), Gaps = 21/152 (13%)

Query: 3   KGNVFMSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
               +M+ ALE A  A  R    P VGAV V N  ++ +  +     K  T HAEI+A++
Sbjct: 2   DDRYYMNMALELAARARGRTSPNPMVGAVLVKNGVVVGQGYHM----KAGTPHAEIIALK 57

Query: 61  MGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGT 114
                          LYV LEPC        CA A+  A + R+    ++P       G 
Sbjct: 58  EAGNEA-----RGATLYVNLEPCCHYGRTGPCADAVIEAGVARVVAAMADPNPLVAGGGL 112

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
           +    A      E+  G+ E  +R++ + F K
Sbjct: 113 KKIKEAGL----EVTLGVMEDEARELNEAFIK 140


>gi|325498303|gb|EGC96162.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Escherichia fergusonii ECD227]
          Length = 367

 Score =  113 bits (284), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 36/155 (23%), Positives = 57/155 (36%), Gaps = 21/155 (13%)

Query: 3   KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +   +M+ AL+ AQ      +  P VG V V + +I+    +          HAE+ A+R
Sbjct: 2   QDEYYMARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHHRAGE----PHAEVHALR 57

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           M               YVTLEPC        C  A+  A + R+     +P       G 
Sbjct: 58  MAGEKA-----KGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVASMQDPNPQVAGRGL 112

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
                A      ++  G+    + Q+ + F K  R
Sbjct: 113 YRLQQAG----IDVSHGLMMSEAEQLNKGFLKRMR 143


>gi|229592849|ref|YP_002874968.1| riboflavin biosynthesis protein RibD [Pseudomonas fluorescens
           SBW25]
 gi|229364715|emb|CAY52681.1| riboflavin biosynthesis protein RibD [includes:
           diaminohydroxyphosphoribosylaminopyrimidine deaminase;
           5-amino-6-(5-phosphoribosylamino)uracil reductase]
           [Pseudomonas fluorescens SBW25]
          Length = 369

 Score =  113 bits (284), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 35/152 (23%), Positives = 55/152 (36%), Gaps = 21/152 (13%)

Query: 4   GNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
              +M+ ALE A+           VG V V + +++    +          HAE+ A+R 
Sbjct: 3   DAHYMARALELARKGLYTTHPNPRVGCVIVRDGQVVGEGWHVRTGE----PHAEVHALRA 58

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
                          YVTLEPC        CA A+  A + R+     +P       G Q
Sbjct: 59  AGDKA-----RGATAYVTLEPCSHYGHTPPCADALVSAGLARVVAAMQDPNPEVAGRGMQ 113

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
               A      ++  G+ E  +R + + F K 
Sbjct: 114 RLAQAG----IDVRSGVLESEARALNRGFLKR 141


>gi|282877095|ref|ZP_06285937.1| riboflavin biosynthesis protein RibD [Prevotella buccalis ATCC
           35310]
 gi|281300777|gb|EFA93104.1| riboflavin biosynthesis protein RibD [Prevotella buccalis ATCC
           35310]
          Length = 326

 Score =  113 bits (284), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 37/149 (24%), Positives = 61/149 (40%), Gaps = 17/149 (11%)

Query: 4   GNVFMSCALEEAQ--NAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
             ++M   L+ A+   A  +    VGAV V   +I+    +         AHAE+ A   
Sbjct: 7   DKMYMRRCLQLAKQGRALAKPNPMVGAVIVYQGRILGEGYHVRCGQ----AHAEVNAF-A 61

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
             R   + +LP+  LYV+LEPC        CA  I    ++R+  G  +P       G Q
Sbjct: 62  SVRPADEPLLPQSTLYVSLEPCCHTGKTPPCADLIIRKHVKRVVCGCIDPFAQVHGRGVQ 121

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDF 144
               A      ++  G+ ++  R + + F
Sbjct: 122 KLRDAG----IDVTVGVLDEECRALNRQF 146


>gi|168210245|ref|ZP_02635870.1| riboflavin biosynthesis protein RibD [Clostridium perfringens B
           str. ATCC 3626]
 gi|170711633|gb|EDT23815.1| riboflavin biosynthesis protein RibD [Clostridium perfringens B
           str. ATCC 3626]
          Length = 365

 Score =  113 bits (284), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 37/149 (24%), Positives = 57/149 (38%), Gaps = 21/149 (14%)

Query: 4   GNVFMSCALEEAQNAAL-RNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
              FM  ALE A+      N  P VGAV V   +II +  +          HAEI +I  
Sbjct: 2   DEFFMKKALELARKGEGYVNPNPLVGAVIVKGGEIIGQGYHEFFGGN----HAEINSINS 57

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
             +           +YVTLEPC        C  AI   +++R+  G  +P         +
Sbjct: 58  SIKST-----EGATIYVTLEPCCHYGKTPPCVEAIIKNKLKRVVVGTLDPNPLVSGKSIK 112

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDF 144
               +      E+  G+ E+   ++ + F
Sbjct: 113 ILRESG----IEVKVGVLEKECIRLNEIF 137


>gi|238765182|ref|ZP_04626114.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Yersinia
           kristensenii ATCC 33638]
 gi|238696616|gb|EEP89401.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Yersinia
           kristensenii ATCC 33638]
          Length = 369

 Score =  113 bits (284), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 37/157 (23%), Positives = 57/157 (36%), Gaps = 21/157 (13%)

Query: 1   MKKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           M+    +M+ A E A+      +  P VG V V + +I+    +          HAE+ A
Sbjct: 1   MQPDEFYMARAFELARLGRFTTSPNPNVGCVVVRDGEIVGEGYHLRAGE----PHAEVHA 56

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
           +RM               YVTLEPC        CA A+  A ++R+     +P       
Sbjct: 57  LRMAGEKA-----RGATAYVTLEPCSHHGRTPPCADALLTAGVKRVVAAMQDPNPQVAGR 111

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
           G      A      E+  G+    +  +   F K  R
Sbjct: 112 GLYKLKQAG----VEVDHGLMLAEAEAVNLGFLKRMR 144


>gi|87121732|ref|ZP_01077619.1| Riboflavin biosynthesis protein RibD:Riboflavin-specific deaminase,
           C-terminal [Marinomonas sp. MED121]
 gi|86162983|gb|EAQ64261.1| Riboflavin biosynthesis protein RibD:Riboflavin-specific deaminase,
           C-terminal [Marinomonas sp. MED121]
          Length = 383

 Score =  113 bits (284), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 35/153 (22%), Positives = 55/153 (35%), Gaps = 21/153 (13%)

Query: 3   KGNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
               +M+ A++ A+           VG V V +N +++   ++         HAE+ AI 
Sbjct: 8   NHEYWMAQAIQLARKGLYTTHPNPRVGCVLVRDNSLVAEGYHKVAGEG----HAEVNAIA 63

Query: 61  MGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGT 114
                           YVTLEPC+       CA A+  A + RL YG  +P       G 
Sbjct: 64  NA-----NGDTQGCTAYVTLEPCSHQGKTGPCAKALIKANVSRLVYGMQDPNPDVAGRGL 118

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
                A      E+   + E  +  +   F K 
Sbjct: 119 AMLKEAG----IEVIGPVMETEALALNPGFIKR 147


>gi|332160725|ref|YP_004297302.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Yersinia enterocolitica subsp. palearctica
           105.5R(r)]
 gi|325664955|gb|ADZ41599.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Yersinia enterocolitica subsp. palearctica
           105.5R(r)]
          Length = 369

 Score =  113 bits (284), Expect = 9e-24,   Method: Composition-based stats.
 Identities = 37/157 (23%), Positives = 57/157 (36%), Gaps = 21/157 (13%)

Query: 1   MKKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           M+    +M+ A E A+      +  P VG V V + +I+    +          HAE+ A
Sbjct: 1   MQPDEFYMARAFELARLGRFTTSPNPNVGCVLVRDGEIVGEGYHLRAGE----PHAEVHA 56

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
           +RM               YVTLEPC        CA A+  A ++R+     +P       
Sbjct: 57  LRMAGEKA-----RGATAYVTLEPCSHHGRTPPCADALLTAGVKRVVAAMQDPNPQVAGR 111

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
           G      A      E+  G+    +  +   F K  R
Sbjct: 112 GLYKLKQAG----VEVDHGLMLAEAEAVNLGFLKRMR 144


>gi|292487445|ref|YP_003530317.1| diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Erwinia amylovora CFBP1430]
 gi|292898687|ref|YP_003538056.1| riboflavin biosynthesis protein RibD [Erwinia amylovora ATCC 49946]
 gi|291198535|emb|CBJ45643.1| riboflavin biosynthesis protein RibD [includes:
           diaminohydroxyphosphoribosylaminopyrimidine deaminase;
           5-amino-6-(5-phosphoribosylamino)uracil reductase]
           [Erwinia amylovora ATCC 49946]
 gi|291552864|emb|CBA19909.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Erwinia amylovora CFBP1430]
          Length = 367

 Score =  113 bits (284), Expect = 9e-24,   Method: Composition-based stats.
 Identities = 36/154 (23%), Positives = 56/154 (36%), Gaps = 21/154 (13%)

Query: 4   GNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
              +M+ ALE A+         P VG V V +++I+    +          HAE+ A+RM
Sbjct: 3   DEAYMARALELARRGRFTTTPNPNVGCVLVRDDQIVGEGYHMRAGE----PHAEVHALRM 58

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
                          YVTLEPC        C  A+  A ++R+     +P       G  
Sbjct: 59  AGEKS-----RGATAYVTLEPCSHHGRTPPCCEALIAAGVKRVVTAMQDPNPQVAGRGLY 113

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
               A      E+  G+    +  + + F K  R
Sbjct: 114 RLQQAG----IEVSHGLMMPEAEALNRGFLKRMR 143


>gi|282857766|ref|ZP_06266975.1| riboflavin biosynthesis protein RibD [Pyramidobacter piscolens
           W5455]
 gi|282584436|gb|EFB89795.1| riboflavin biosynthesis protein RibD [Pyramidobacter piscolens
           W5455]
          Length = 364

 Score =  113 bits (284), Expect = 9e-24,   Method: Composition-based stats.
 Identities = 36/158 (22%), Positives = 58/158 (36%), Gaps = 25/158 (15%)

Query: 3   KGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
                M  AL+ A     +   P   VG V V + +++ R  + +        HAE  A+
Sbjct: 6   TDEHHMRQALDLALRGLGKT-TPNPMVGCVIVKDGEVVGRGWHDHLGGL----HAEAAAL 60

Query: 60  RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113
           R               +YVTLEPC        CA A+  + + R      +P       G
Sbjct: 61  RDAGDKA-----RGATVYVTLEPCSHQGRQPPCAPALVKSGVTRCVCAVGDPNPKVSGRG 115

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFF--KERR 149
            +  + A      E   G+ E+ +  + + FF  + RR
Sbjct: 116 LKILSDAG----VETVCGVLEKEASWLNRGFFSLQTRR 149


>gi|218703696|ref|YP_002411215.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Escherichia coli UMN026]
 gi|293403533|ref|ZP_06647624.1| ribD [Escherichia coli FVEC1412]
 gi|298379145|ref|ZP_06989026.1| ribD [Escherichia coli FVEC1302]
 gi|300900480|ref|ZP_07118647.1| riboflavin biosynthesis protein RibD [Escherichia coli MS 198-1]
 gi|218430793|emb|CAR11667.1| fused diaminohydroxyphosphoribosylaminopyrimidine deaminase;
           5-amino-6-(5-phosphoribosylamino) uracil reductase
           [Escherichia coli UMN026]
 gi|291429386|gb|EFF02406.1| ribD [Escherichia coli FVEC1412]
 gi|298280258|gb|EFI21762.1| ribD [Escherichia coli FVEC1302]
 gi|300355961|gb|EFJ71831.1| riboflavin biosynthesis protein RibD [Escherichia coli MS 198-1]
          Length = 367

 Score =  113 bits (284), Expect = 9e-24,   Method: Composition-based stats.
 Identities = 36/155 (23%), Positives = 57/155 (36%), Gaps = 21/155 (13%)

Query: 3   KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +   +M+ AL+ AQ      +  P VG V V + +I+    +          HAE+ A+R
Sbjct: 2   QDEYYMARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHHRAGE----PHAEVHALR 57

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           M               YVTLEPC        C  A+  A + R+     +P       G 
Sbjct: 58  MAGEKA-----KGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVASMQDPNPQVAGRGL 112

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
                A      ++  G+    + Q+ + F K  R
Sbjct: 113 YRLQQAG----IDVSHGLMMSEAEQLNKGFLKRMR 143


>gi|253581821|ref|ZP_04859045.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase
           [Fusobacterium varium ATCC 27725]
 gi|251836170|gb|EES64707.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase
           [Fusobacterium varium ATCC 27725]
          Length = 358

 Score =  113 bits (284), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 40/153 (26%), Positives = 59/153 (38%), Gaps = 25/153 (16%)

Query: 4   GNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
              +M  ALE A  A     +   P VGAV V + KI+    ++         HAE+ A+
Sbjct: 2   DKKYMERALELA--ALGEGYVNPNPMVGAVVVKDGKIVGEGYHKKYGG----PHAEVFAL 55

Query: 60  RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113
                           +YVTLEPC        CA  I    I+R    + +P       G
Sbjct: 56  EEAGEKA-----EGATIYVTLEPCSHYGKTPPCAKKIIDMGIKRCIIASLDPNPLVSGRG 110

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
            +  T A      E+  GI E+ + ++ + F K
Sbjct: 111 IKMMTDAG----IEVVTGIMEKEALELNRVFMK 139


>gi|260438155|ref|ZP_05791971.1| riboflavin biosynthesis protein RibD [Butyrivibrio crossotus DSM
           2876]
 gi|292809343|gb|EFF68548.1| riboflavin biosynthesis protein RibD [Butyrivibrio crossotus DSM
           2876]
          Length = 360

 Score =  113 bits (283), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 35/151 (23%), Positives = 51/151 (33%), Gaps = 21/151 (13%)

Query: 3   KGNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
               +M  A+  A+           VGAV V + +II    +          HAE  AI+
Sbjct: 2   TDRDYMLRAISLAKKGTGYTSPNPLVGAVIVKDGRIIGEGYHAIYGDL----HAERNAIK 57

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
                          +YVTLEPC        C  AI  A I ++  G+ +P       G 
Sbjct: 58  NL-----TVDAKGATIYVTLEPCCHYGKQPPCTEAILAAGITKVVIGSRDPNPLVSGRGA 112

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
            F       H  E+      +   ++   FF
Sbjct: 113 DFLRS----HGIEVIEDFMREECDELNPIFF 139


>gi|300721779|ref|YP_003711057.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino) uracil
           reductase [Xenorhabdus nematophila ATCC 19061]
 gi|297628274|emb|CBJ88835.1| bifunctional: diaminohydroxyphosphoribosylaminopyrimidine deaminase
           (N-terminal); 5-amino-6-(5-phosphoribosylamino) uracil
           reductase [Xenorhabdus nematophila ATCC 19061]
          Length = 369

 Score =  113 bits (283), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 38/157 (24%), Positives = 57/157 (36%), Gaps = 21/157 (13%)

Query: 1   MKKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           M    ++MS ALE A       +  P VG V V + +I+    +          HAE+ A
Sbjct: 2   MTLDEIYMSRALELAYQGRFTTSPNPNVGCVIVKDEEIVGEGFHLRAGE----PHAEVHA 57

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
           +RM               YVTLEPC        CA A+  A + R+     +P       
Sbjct: 58  LRMAGEKA-----KGATAYVTLEPCSHHGKTPPCADALIAAGLSRVVVAMQDPNPQVAGR 112

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
           G      A       +  G+   ++  + + F K  R
Sbjct: 113 GLYKLQQAG----IAVEHGLMMDQAESLNKGFLKRMR 145


>gi|289523035|ref|ZP_06439889.1| riboflavin biosynthesis protein RibD [Anaerobaculum
           hydrogeniformans ATCC BAA-1850]
 gi|289503578|gb|EFD24742.1| riboflavin biosynthesis protein RibD [Anaerobaculum
           hydrogeniformans ATCC BAA-1850]
          Length = 365

 Score =  113 bits (283), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 37/153 (24%), Positives = 61/153 (39%), Gaps = 21/153 (13%)

Query: 2   KKGNVFMSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
           ++   +M   L  A+    R    P VG V V ++KI+    +R       + HAE++A+
Sbjct: 9   RQNEYYMRIVLSLARRGTGRTSPNPRVGCVVVKDDKIVGTGFHR----CPGSPHAEVMAL 64

Query: 60  RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113
            M   +          LYV LEPC        CA  I    I+R++    +P       G
Sbjct: 65  SMAKDMS-----RGATLYVNLEPCIHYGRTPPCAPLIVERGIKRVFISTEDPFPKVRGRG 119

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
            ++       H  E+  G+    +R + + F K
Sbjct: 120 VEYLRS----HGVEVVSGVLSDEARWLNRGFLK 148


>gi|260665250|ref|ZP_05866099.1| riboflavin biosynthesis protein RibD [Lactobacillus jensenii
           SJ-7A-US]
 gi|313472797|ref|ZP_07813285.1| riboflavin biosynthesis protein RibD [Lactobacillus jensenii 1153]
 gi|260560987|gb|EEX26962.1| riboflavin biosynthesis protein RibD [Lactobacillus jensenii
           SJ-7A-US]
 gi|313448878|gb|EEQ68026.2| riboflavin biosynthesis protein RibD [Lactobacillus jensenii 1153]
          Length = 352

 Score =  113 bits (283), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 40/150 (26%), Positives = 61/150 (40%), Gaps = 20/150 (13%)

Query: 1   MKKGNVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           MK    FM  AL EA            VGAV V +N++++   +          HAE  A
Sbjct: 2   MKTDEDFMGLALTEASKGRYHTWTNPMVGAVVVKDNQVLATGYHHRYGD----VHAERDA 57

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
           I      L+ E L    LYVTLEPC        C+  I  ++I+R+     +P       
Sbjct: 58  I----SKLTPEQLFNSTLYVTLEPCNHTGKQPPCSDLIIASKIKRVVISEIDPHSLVTGK 113

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQ 142
           G +        H+  +  G+  Q ++++ Q
Sbjct: 114 GIKKLKA----HNISVTTGVLAQEAKKLNQ 139


>gi|256421680|ref|YP_003122333.1| CMP/dCMP deaminase zinc-binding [Chitinophaga pinensis DSM 2588]
 gi|256036588|gb|ACU60132.1| CMP/dCMP deaminase zinc-binding [Chitinophaga pinensis DSM 2588]
          Length = 131

 Score =  113 bits (283), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 33/115 (28%), Positives = 54/115 (46%), Gaps = 2/115 (1%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M+   + A  AA   E PVG+V V +  II     ++++ KD+T HAE++AI    R  +
Sbjct: 1   MARCYQLADIAAKEGESPVGSVIVKDGIIIGEGSEKSKQQKDITRHAEVVAILDALR--N 58

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
            + L    LY  +EPC +C+  I   +I  + +   + + GG        T    
Sbjct: 59  TDSLAGSVLYTNVEPCLLCSYVIRHYKIAEVVFARHSGELGGTHQPFDLLTSPDF 113


>gi|238855788|ref|ZP_04646080.1| riboflavin biosynthesis protein RibD [Lactobacillus jensenii 269-3]
 gi|282934748|ref|ZP_06339990.1| riboflavin biosynthesis protein RibD [Lactobacillus jensenii 208-1]
 gi|238831564|gb|EEQ23909.1| riboflavin biosynthesis protein RibD [Lactobacillus jensenii 269-3]
 gi|281301189|gb|EFA93491.1| riboflavin biosynthesis protein RibD [Lactobacillus jensenii 208-1]
          Length = 359

 Score =  113 bits (283), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 40/150 (26%), Positives = 61/150 (40%), Gaps = 20/150 (13%)

Query: 1   MKKGNVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           MK    FM  AL EA            VGAV V +N++++   +          HAE  A
Sbjct: 9   MKTDEDFMGLALTEASKGRYHTWTNPMVGAVVVKDNQVLATGYHHRYGD----VHAERDA 64

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
           I      L+ E L    LYVTLEPC        C+  I  ++I+R+     +P       
Sbjct: 65  I----SKLTPEQLFNSTLYVTLEPCNHTGKQPPCSDLIIASKIKRVVISEIDPHSLVTGK 120

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQ 142
           G +        H+  +  G+  Q ++++ Q
Sbjct: 121 GIKKLKA----HNISVTTGVLAQEAKKLNQ 146


>gi|317509467|ref|ZP_07967084.1| cytidine and deoxycytidylate deaminase zinc-binding protein
           [Segniliparus rugosus ATCC BAA-974]
 gi|316252241|gb|EFV11694.1| cytidine and deoxycytidylate deaminase zinc-binding protein
           [Segniliparus rugosus ATCC BAA-974]
          Length = 167

 Score =  113 bits (283), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 28/94 (29%), Positives = 44/94 (46%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           F+   ++ A+        P   V V + +I++ + N+  +  D TAHAEILAIR  C  L
Sbjct: 3   FIQRTVDLARQNVAEGGRPFATVIVRDGEILAESANKVAQTGDPTAHAEILAIREACAKL 62

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
             E L    +YV   PC MC  ++       + +
Sbjct: 63  GTEHLVGATIYVLAHPCPMCLGSLYYCSPDEVVF 96


>gi|311280696|ref|YP_003942927.1| riboflavin biosynthesis protein RibD [Enterobacter cloacae SCF1]
 gi|308749891|gb|ADO49643.1| riboflavin biosynthesis protein RibD [Enterobacter cloacae SCF1]
          Length = 368

 Score =  113 bits (283), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 37/155 (23%), Positives = 55/155 (35%), Gaps = 21/155 (13%)

Query: 3   KGNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +  V+M+ AL+ AQ           VG V V +  I+    +          HAE+ A+R
Sbjct: 2   QDEVYMARALKLAQRGRFTTHPNPRVGCVIVRDGDIVGEGFHLRAGE----PHAEVHALR 57

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           M               YVTLEPC        C  A+  A + R+     +P       G 
Sbjct: 58  MAGDKA-----RGATAYVTLEPCSHHGRTPPCCDALIAAGVSRVVAAMQDPNPQVAGRGL 112

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
                A      E+  G+    + Q+ + F K  R
Sbjct: 113 YRLQQAG----VEVSHGLMMSEAEQLNKGFLKRMR 143


>gi|294498727|ref|YP_003562427.1| riboflavin biosynthesis protein RibD [Bacillus megaterium QM B1551]
 gi|294348664|gb|ADE68993.1| riboflavin biosynthesis protein RibD [Bacillus megaterium QM B1551]
          Length = 363

 Score =  113 bits (283), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 41/152 (26%), Positives = 66/152 (43%), Gaps = 21/152 (13%)

Query: 1   MKKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           M     +M+ AL+ A+      +  P VG+V V +N+I+    +          HAEI A
Sbjct: 1   MINHEFYMNIALQNAKATKGQTDPNPLVGSVIVNDNRIVGIGTHLKAGE----PHAEIHA 56

Query: 59  IRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIEN 112
           +RM       E       YVTLEPC+       CA A+  A ++++     +P      N
Sbjct: 57  LRMAG-----EQAKGATAYVTLEPCSHHGRTGPCAEALVEAGVKKVVIATLDPNPLVAGN 111

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
           G +       +   E+  G+ E+ SRQ+ + F
Sbjct: 112 GVKILE----NAGIEVITGVCEEESRQMNEVF 139


>gi|226308791|ref|YP_002768751.1| cytosine deaminase [Rhodococcus erythropolis PR4]
 gi|229489217|ref|ZP_04383083.1| cytosine deaminase [Rhodococcus erythropolis SK121]
 gi|226187908|dbj|BAH36012.1| putative cytosine deaminase [Rhodococcus erythropolis PR4]
 gi|229324721|gb|EEN90476.1| cytosine deaminase [Rhodococcus erythropolis SK121]
          Length = 154

 Score =  113 bits (283), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 33/146 (22%), Positives = 55/146 (37%), Gaps = 10/146 (6%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
               F+  A+E+A+       +P+GA  +   ++++   NR  ++     H E   I   
Sbjct: 7   TDEYFLGLAIEQAKIGWEEGGVPIGAALIHRGEVLAVGRNRRVQMNSAIRHGETDCIERA 66

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
            R L   +  E  LY TL PC MCA    L  I R+  G  N      E       L + 
Sbjct: 67  GR-LPASVYRECVLYTTLSPCFMCAGTARLYEIPRIVVG-ENRSFEASEEW-----LRSS 119

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKER 148
               ++   + +     ++     ER
Sbjct: 120 GIQVDV---VDDAECVALMDRMLAER 142


>gi|318604604|emb|CBY26102.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase;
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Yersinia enterocolitica subsp. palearctica Y11]
          Length = 369

 Score =  113 bits (283), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 37/157 (23%), Positives = 57/157 (36%), Gaps = 21/157 (13%)

Query: 1   MKKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           M+    +M+ A E A+      +  P VG V V + +I+    +          HAE+ A
Sbjct: 1   MQPDEFYMARAFELARLGRFTTSPNPNVGCVLVRDGEIVGEGYHLRAGE----PHAEVHA 56

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
           +RM               YVTLEPC        CA A+  A ++R+     +P       
Sbjct: 57  LRMAGEKA-----RGATAYVTLEPCSHHGRTPPCADALLTAGVKRVVAAMQDPNPQVAGR 111

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
           G      A      E+  G+    +  +   F K  R
Sbjct: 112 GLYKLKQAG----VEVDHGLMLAEAEAVNLGFLKRMR 144


>gi|315179290|gb|ADT86204.1| zinc-binding domain protein [Vibrio furnissii NCTC 11218]
          Length = 158

 Score =  113 bits (283), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 36/148 (24%), Positives = 59/148 (39%), Gaps = 14/148 (9%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMG 62
              ++  +   A++A  R   P  AV V  N +I+    N      D+T HAE L +   
Sbjct: 7   DYRWLRHSFALAEDAKSRGIHPFAAVLVDANGEILLEQINGYLPDLDMTGHAERLIMTQA 66

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
            ++   + L +  LYV+ EPC MCA AI  A + R+ YG S  +   +          T 
Sbjct: 67  SKLYRPDFLNQCTLYVSAEPCAMCAGAIYWAGVGRVVYGLSETRLKALTG--NHPENPTL 124

Query: 123 -----------HHSPEIYPGISEQRSRQ 139
                          E++  + E  + +
Sbjct: 125 ALPCRIVFESGQRITEVHGPLLEAEAEE 152


>gi|291532792|emb|CBL05905.1| Cytosine/adenosine deaminases [Megamonas hypermegale ART12/1]
          Length = 158

 Score =  113 bits (283), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 27/105 (25%), Positives = 45/105 (42%), Gaps = 1/105 (0%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRM 61
               ++  A+E ++ +      P GA+ V     I+    N      + + HAE   +  
Sbjct: 2   DHLFYLRKAIEVSKKSREHGNTPFGAILVDGEGNILLEQENIEITESNCSGHAETSLMIK 61

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPK 106
             +  S++ L    LY T EPC MCA AI    + ++ YG S  +
Sbjct: 62  ASKKYSKDFLWNCTLYSTAEPCAMCAGAIYWGNVGKVVYGISEKR 106


>gi|123443368|ref|YP_001007342.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Yersinia enterocolitica subsp. enterocolitica
           8081]
 gi|122090329|emb|CAL13195.1| riboflavin biosynthesis protein RibD [includes:
           diaminohydroxyphosphoribosylaminopyrimidine deaminase;
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Yersinia enterocolitica subsp. enterocolitica 8081]
          Length = 369

 Score =  113 bits (283), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 37/157 (23%), Positives = 57/157 (36%), Gaps = 21/157 (13%)

Query: 1   MKKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           M+    +M+ A E A+      +  P VG V V + +I+    +          HAE+ A
Sbjct: 1   MQPDEFYMARAFELARLGRFTTSPNPNVGCVLVRDGEIVGEGYHLRAGE----PHAEVHA 56

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
           +RM               YVTLEPC        CA A+  A ++R+     +P       
Sbjct: 57  LRMAGEKA-----RGATAYVTLEPCSHHGRTPPCADALLTAGVKRVVAAMQDPNPQVAGR 111

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
           G      A      E+  G+    +  +   F K  R
Sbjct: 112 GLYKLKQAG----VEVDHGLMLAEAEAVNLGFLKRMR 144


>gi|301799334|emb|CBW31869.1| riboflavin biosynthesis protein [includes:
           diaminohydroxyphosphoribosylaminopyrimidine deaminase
           and 5-amino-6-(5-phosphoribosylamino)uracil reductase]
           [Streptococcus pneumoniae OXC141]
          Length = 366

 Score =  113 bits (283), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 40/150 (26%), Positives = 59/150 (39%), Gaps = 21/150 (14%)

Query: 3   KGNVFMSCALEEAQN-AALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
             + +M  A++ AQ  A   N  P VGA+ V +N II +  +          HAE  A++
Sbjct: 2   SDSKYMKLAIKLAQKGAGYVNPNPMVGAIIVKDNHIIGQGYHEFFGG----PHAERNALK 57

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
             CR           LYVTLEPC        C  AI  + I R+  G+ +        G 
Sbjct: 58  N-CRKSP----VGATLYVTLEPCCHFGKTPPCIDAIIDSGITRVVIGSLDCNPIVSGKGV 112

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
           +           ++  GI E     +I+ F
Sbjct: 113 KILEENNL----QVTVGILENECLNLIKSF 138


>gi|168493876|ref|ZP_02718019.1| riboflavin biosynthesis protein RibD [Streptococcus pneumoniae
           CDC3059-06]
 gi|169833009|ref|YP_001693699.1| riboflavin biosynthesis protein RibD [Streptococcus pneumoniae
           Hungary19A-6]
 gi|168995511|gb|ACA36123.1| riboflavin biosynthesis protein RibD [Streptococcus pneumoniae
           Hungary19A-6]
 gi|183576084|gb|EDT96612.1| riboflavin biosynthesis protein RibD [Streptococcus pneumoniae
           CDC3059-06]
          Length = 366

 Score =  113 bits (283), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 40/150 (26%), Positives = 59/150 (39%), Gaps = 21/150 (14%)

Query: 3   KGNVFMSCALEEAQN-AALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
             + +M  A++ AQ  A   N  P VGA+ V +N II +  +          HAE  A++
Sbjct: 2   SDSKYMKLAIKLAQKGAGYVNPNPMVGAIIVKDNHIIGQGYHEFFGG----PHAERNALK 57

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
             CR           LYVTLEPC        C  AI  + I R+  G+ +        G 
Sbjct: 58  N-CRKSP----VGATLYVTLEPCCHFGKTPPCIDAIIDSGITRVVIGSLDCNPIVSGKGV 112

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
           +           ++  GI E     +I+ F
Sbjct: 113 KILEENNL----QVTVGILENECLNLIKSF 138


>gi|149005931|ref|ZP_01829660.1| riboflavin synthase subunit alpha [Streptococcus pneumoniae
           SP18-BS74]
 gi|168483819|ref|ZP_02708771.1| riboflavin biosynthesis protein RibD [Streptococcus pneumoniae
           CDC1873-00]
 gi|225855949|ref|YP_002737460.1| riboflavin biosynthesis protein RibD [Streptococcus pneumoniae
           P1031]
 gi|307126404|ref|YP_003878435.1| riboflavin biosynthesis protein RibD [Streptococcus pneumoniae
           670-6B]
 gi|147762287|gb|EDK69248.1| riboflavin synthase subunit alpha [Streptococcus pneumoniae
           SP18-BS74]
 gi|172042835|gb|EDT50881.1| riboflavin biosynthesis protein RibD [Streptococcus pneumoniae
           CDC1873-00]
 gi|225725798|gb|ACO21650.1| riboflavin biosynthesis protein RibD [Streptococcus pneumoniae
           P1031]
 gi|306483466|gb|ADM90335.1| riboflavin biosynthesis protein RibD [Streptococcus pneumoniae
           670-6B]
 gi|332076629|gb|EGI87091.1| riboflavin biosynthesis protein RibD [Streptococcus pneumoniae
           GA17545]
 gi|332203340|gb|EGJ17407.1| riboflavin biosynthesis protein RibD [Streptococcus pneumoniae
           GA47368]
          Length = 366

 Score =  113 bits (283), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 40/150 (26%), Positives = 59/150 (39%), Gaps = 21/150 (14%)

Query: 3   KGNVFMSCALEEAQN-AALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
             + +M  A++ AQ  A   N  P VGA+ V +N II +  +          HAE  A++
Sbjct: 2   SDSKYMKLAIKLAQKGAGYVNPNPMVGAIIVKDNHIIGQGYHEFFGG----PHAERNALK 57

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
             CR           LYVTLEPC        C  AI  + I R+  G+ +        G 
Sbjct: 58  N-CRKSP----VGATLYVTLEPCCHFGKTPPCIDAIIDSGITRVVIGSLDCNPIVSGKGV 112

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
           +           ++  GI E     +I+ F
Sbjct: 113 KILEENNL----QVTVGILENECLNLIKSF 138


>gi|148253573|ref|YP_001238158.1| putative cytidine/deoxycytidylate deaminase family protein
           [Bradyrhizobium sp. BTAi1]
 gi|146405746|gb|ABQ34252.1| Putative Cytidine/deoxycytidylate deaminase family protein
           [Bradyrhizobium sp. BTAi1]
          Length = 240

 Score =  113 bits (283), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 36/150 (24%), Positives = 57/150 (38%), Gaps = 14/150 (9%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRM 61
           +   F+  +   A+ +      P  AV V    +++  A N     +D TAHAE L    
Sbjct: 86  RDAHFLRHSFAVARRSMSHGNHPFAAVLVDAGGRVLIEAENGYMPARDATAHAERLVATQ 145

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
            C  ++ +I     LY + EPC MCA AI  A I R+ YG S  +    +         T
Sbjct: 146 ACTSIAADIRATATLYSSAEPCAMCAGAIYWAGIGRVVYGLSERRL--RDFTGNHPENPT 203

Query: 122 CH-----------HSPEIYPGISEQRSRQI 140
                         + E+   + E  +  +
Sbjct: 204 LDLPCRDVFASGQRTTEVVGPLLEDEAAAL 233


>gi|300924134|ref|ZP_07140126.1| riboflavin biosynthesis protein RibD [Escherichia coli MS 182-1]
 gi|301330725|ref|ZP_07223327.1| riboflavin biosynthesis protein RibD [Escherichia coli MS 78-1]
 gi|300419587|gb|EFK02898.1| riboflavin biosynthesis protein RibD [Escherichia coli MS 182-1]
 gi|300843386|gb|EFK71146.1| riboflavin biosynthesis protein RibD [Escherichia coli MS 78-1]
          Length = 367

 Score =  113 bits (283), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 36/155 (23%), Positives = 58/155 (37%), Gaps = 21/155 (13%)

Query: 3   KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +   +M+ AL+ AQ      +  P VG V V + +I+    ++         HAE+ A+R
Sbjct: 2   QDEYYMARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGE----PHAEVHALR 57

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           M               YVTLEPC        C  A+  A + R+     +P       G 
Sbjct: 58  MAGEKA-----KGAIAYVTLEPCSHHGRTPPCCDALIAAGVARVVASMQDPNPQVAGRGL 112

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
                A      ++  G+    + Q+ + F K  R
Sbjct: 113 YRLQQAG----IDVSHGLMMSEAEQLNKGFLKRMR 143


>gi|256020381|ref|ZP_05434246.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Shigella sp. D9]
 gi|332281560|ref|ZP_08393973.1| fused diaminohydroxyphosphoribosylaminopyrimidine deaminase
           [Shigella sp. D9]
 gi|332103912|gb|EGJ07258.1| fused diaminohydroxyphosphoribosylaminopyrimidine deaminase
           [Shigella sp. D9]
          Length = 367

 Score =  113 bits (283), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 36/155 (23%), Positives = 58/155 (37%), Gaps = 21/155 (13%)

Query: 3   KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +   +M+ AL+ AQ      +  P VG V V + +I+    ++         HAE+ A+R
Sbjct: 2   QDEYYMARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGE----PHAEVHALR 57

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           M               YVTLEPC        C  A+  A + R+     +P       G 
Sbjct: 58  MAGEKA-----KGAIAYVTLEPCSHHGRTPPCCDALIAAGVARVVASMQDPNPQVAGRGL 112

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
                A      ++  G+    + Q+ + F K  R
Sbjct: 113 YRLQQAG----IDVSHGLMMSEAEQLNKGFLKRMR 143


>gi|226951731|ref|ZP_03822195.1| riboflavin biosynthesis protein RibD [Acinetobacter sp. ATCC 27244]
 gi|226837521|gb|EEH69904.1| riboflavin biosynthesis protein RibD [Acinetobacter sp. ATCC 27244]
          Length = 366

 Score =  113 bits (283), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 36/155 (23%), Positives = 62/155 (40%), Gaps = 21/155 (13%)

Query: 1   MKKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           + +   +M  A++ A+         P VG V V + KI+    +     K    HAE+ A
Sbjct: 9   LSQAKYWMQRAIDLARLGQYSTKPNPNVGCVIVKDGKILGEGFH----PKAGQPHAEVFA 64

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
           +R        E   +   YVTLEPC        CA A+  A+++++    S+P       
Sbjct: 65  LRQAG-----ENAKDATAYVTLEPCAHYGRTPPCAEALVKAQVKKVVIACSDPNPLVAGK 119

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
           G +    A      E+  G+  + ++ +   F K 
Sbjct: 120 GVKILLDAG----IEVETGVCTEIAKGLNLGFLKA 150


>gi|221140247|ref|ZP_03564740.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase
           [Staphylococcus aureus subsp. aureus str. JKD6009]
          Length = 347

 Score =  113 bits (283), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 39/153 (25%), Positives = 65/153 (42%), Gaps = 26/153 (16%)

Query: 5   NVFMSCALEEAQNAALRNEI--PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
           + FM  A++ A     +  +  PVGAV V   +I+    +  +  K    HAE+ A+ M 
Sbjct: 2   SQFMDYAIQLANMVQGQTGVNPPVGAVIVKEGRIVGIGAHLRKGDK----HAEVQALDMA 57

Query: 63  CRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116
                Q+      +Y+TLEPC        C   I   +I ++ Y   +       N    
Sbjct: 58  -----QQNAEGATIYITLEPCSHFGSTPPCVNKIIDCKIAKVVYATKD-------NSLDT 105

Query: 117 YTLATCH-HSPEIYPGISEQRSRQIIQDFFKER 148
           +   T   H  E+   + ++R+ Q+ QDFFK +
Sbjct: 106 HGDETLRAHGIEVEC-VDDERASQLYQDFFKAK 137


>gi|324114633|gb|EGC08601.1| riboflavin biosynthesis protein RibD [Escherichia fergusonii B253]
          Length = 367

 Score =  113 bits (283), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 36/155 (23%), Positives = 57/155 (36%), Gaps = 21/155 (13%)

Query: 3   KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +   +M+ AL+ AQ      +  P VG V V + +I+    +          HAE+ A+R
Sbjct: 2   QDEYYMARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHHRAGE----PHAEVYALR 57

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           M               YVTLEPC        C  A+  A + R+     +P       G 
Sbjct: 58  MAGEKA-----KGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVASMQDPNPQVAGRGL 112

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
                A      ++  G+    + Q+ + F K  R
Sbjct: 113 YRLQQAG----IDVSHGLMMSEAEQLNKGFLKRMR 143


>gi|294810932|ref|ZP_06769575.1| Cytosine/adenosine deaminase [Streptomyces clavuligerus ATCC 27064]
 gi|294323531|gb|EFG05174.1| Cytosine/adenosine deaminase [Streptomyces clavuligerus ATCC 27064]
          Length = 206

 Score =  113 bits (283), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 34/134 (25%), Positives = 53/134 (39%), Gaps = 31/134 (23%)

Query: 1   MKKGNVFMSCALEEAQNAALRN-EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
           M K   FM+ A   A  + +     P GAV   N++I++R  NR     D TAH E+ AI
Sbjct: 20  MAKRKKFMAEAARLATESVVNGWGGPFGAVITKNDEIVARGQNRVLLTGDPTAHGEVEAI 79

Query: 60  RMGCRILSQE------------------------------ILPEVDLYVTLEPCTMCAAA 89
           R   ++L+                                +L   ++Y +  PC MC +A
Sbjct: 80  RKAIQVLNPWAPSIPETHQNTSTLKLIRAEPSDLLPKRARMLKGCEIYTSGAPCPMCMSA 139

Query: 90  ISLARIRRLYYGAS 103
           I  +R   +Y+   
Sbjct: 140 IYWSRCDAVYFSCD 153


>gi|297192826|ref|ZP_06910224.1| cytidine/deoxycytidine deaminase [Streptomyces pristinaespiralis
           ATCC 25486]
 gi|197722375|gb|EDY66283.1| cytidine/deoxycytidine deaminase [Streptomyces pristinaespiralis
           ATCC 25486]
          Length = 149

 Score =  113 bits (283), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 35/148 (23%), Positives = 58/148 (39%), Gaps = 17/148 (11%)

Query: 1   MKKGNV--FMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEIL 57
           M +     +++ A+ EA+       IP+GA     +  ++ R  NR  +  D +AHAE  
Sbjct: 1   MAQDRYGTWLATAVAEARAGLAEGGIPIGAALYGADGTLLGRGHNRRVQDGDPSAHAETE 60

Query: 58  AIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFY 117
           A R   R  S        +  TL PC  C+  +    I R+  G +    GG      + 
Sbjct: 61  AFRAAGRQRS---YRGTTMVTTLSPCWYCSGLVRQFGISRVVIGETETFHGG----HDWL 113

Query: 118 TLATCHHSPEIYPGISEQ-RSRQIIQDF 144
                    EI   + +    R +++DF
Sbjct: 114 AANG----VEIV--LLDDPACRSMMRDF 135


>gi|307244664|ref|ZP_07526768.1| riboflavin biosynthesis protein RibD [Peptostreptococcus stomatis
           DSM 17678]
 gi|306492045|gb|EFM64094.1| riboflavin biosynthesis protein RibD [Peptostreptococcus stomatis
           DSM 17678]
          Length = 372

 Score =  112 bits (282), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 35/148 (23%), Positives = 58/148 (39%), Gaps = 18/148 (12%)

Query: 5   NVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
             +MS A+E A+ A         VGAV V + +++ +  +          HAE  A++  
Sbjct: 3   EKYMSMAIELAKKACGYTNPNPMVGAVIVKDGQVLGKGYH----TWCGCLHAEREALKD- 57

Query: 63  CRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116
           C+     +     +YVTLEPC        C  AI    I ++  G+ +P       G Q 
Sbjct: 58  CQSRGVTV-TGATMYVTLEPCCHYGKTPPCTEAIIENGIAKVVVGSLDPNPKVAGKGIQI 116

Query: 117 YTLATCHHSPEIYPGISEQRSRQIIQDF 144
                  H   +  G+ E+    + + F
Sbjct: 117 LKD----HGINVVTGVMEKECDDLNEVF 140


>gi|254518952|ref|ZP_05131008.1| cytidine/deoxycytidylate deaminase [Clostridium sp. 7_2_43FAA]
 gi|226912701|gb|EEH97902.1| cytidine/deoxycytidylate deaminase [Clostridium sp. 7_2_43FAA]
          Length = 160

 Score =  112 bits (282), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 28/104 (26%), Positives = 42/104 (40%), Gaps = 1/104 (0%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIR 60
           K    ++   +E ++ +     +P G + V  +  II    N        T HAE   + 
Sbjct: 3   KDHIYYLRKCVEVSKRSRESGNMPFGCILVDKDGNIILEQMNIEGTDYKCTGHAETQLME 62

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASN 104
                 S+  L +  LY T EPC MC  AI    + R+ YG S 
Sbjct: 63  KASMKYSKSFLWDCTLYSTAEPCAMCTGAIYWGNVGRIVYGLSE 106


>gi|332827503|gb|EGK00249.1| riboflavin biosynthesis protein RibD [Dysgonomonas gadei ATCC
           BAA-286]
          Length = 355

 Score =  112 bits (282), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 37/153 (24%), Positives = 60/153 (39%), Gaps = 19/153 (12%)

Query: 1   MKKGNVFMSCALEEAQ--NAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           M     +M   L+ AQ           VGAV V   KII    +R        AHAE+ A
Sbjct: 1   MTVEEKYMYRCLQLAQNGRGFTSPNPMVGAVIVHQGKIIGEGYHRQYGK----AHAEVNA 56

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
           +     +  + +L +  +YV+LEPC        CA  I   +I ++     +P       
Sbjct: 57  VNS---VKDKALLKDSTIYVSLEPCSHHGKTPPCAQLIIDNQIPKVVVACLDPYPAVSGR 113

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
           G +           E+  G+ E+ ++ + + FF
Sbjct: 114 GIKMLQDRG----IEVSVGVLEKEAQALNRVFF 142


>gi|225159038|ref|ZP_03725347.1| riboflavin biosynthesis protein RibD [Opitutaceae bacterium TAV2]
 gi|224802351|gb|EEG20614.1| riboflavin biosynthesis protein RibD [Opitutaceae bacterium TAV2]
          Length = 388

 Score =  112 bits (282), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 41/147 (27%), Positives = 59/147 (40%), Gaps = 22/147 (14%)

Query: 3   KGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
           +   FM  AL  A+ A      P   VGA+ V +  +++   +      D   HAE +A+
Sbjct: 7   RHECFMWQALALARRAWGNT-HPNPMVGAIIVEDGAVVAEGWHAR----DGGPHAERVAL 61

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENG 113
               R       P   LYVTLEPC+       C  AI  A IRR+  GA++P       G
Sbjct: 62  TALGRAPK----PGATLYVTLEPCSTHGRTGACCDAIIEAGIRRVVVGATDPNPDHAGAG 117

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQI 140
                 A      E+  G+ E+    +
Sbjct: 118 YARLRAAG----VEVITGVRERECADL 140


>gi|307105321|gb|EFN53571.1| hypothetical protein CHLNCDRAFT_13956 [Chlorella variabilis]
          Length = 131

 Score =  112 bits (282), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 29/80 (36%), Positives = 40/80 (50%), Gaps = 2/80 (2%)

Query: 26  VGAVAVLN--NKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83
            GAV V     +++    N+     D T H E+ AIR  C       LP   LY + +PC
Sbjct: 6   FGAVIVDKETGEVVGEGYNKVILHNDPTWHGEMEAIRKACAKRGSPHLPGTVLYTSAQPC 65

Query: 84  TMCAAAISLARIRRLYYGAS 103
            MC+ AI  AR+  +YYGA+
Sbjct: 66  PMCSTAIMWARVDHVYYGAT 85


>gi|58616834|ref|YP_196033.1| riboflavin biosynthesis protein ribD [Ehrlichia ruminantium str.
           Gardel]
 gi|58416446|emb|CAI27559.1| Riboflavin biosynthesis protein ribD [Ehrlichia ruminantium str.
           Gardel]
          Length = 370

 Score =  112 bits (282), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 36/152 (23%), Positives = 58/152 (38%), Gaps = 25/152 (16%)

Query: 4   GNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
              FMS AL  A+       +   P VG + V +  ++ R   +         HAEI+A+
Sbjct: 10  DKKFMSLALRLARRGL--GNVFPNPAVGCIIVNDGVVVGRGWTQVGGR----PHAEIVAL 63

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENG 113
                +           YVTLEPC+       C   +  A I+R+    ++P      NG
Sbjct: 64  DNVKHLA-----KGATAYVTLEPCSHYGKTGPCVLNLINAGIKRVVIAINDPDMRVSGNG 118

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
            +    A      E+  G+ +  +R +   FF
Sbjct: 119 IKLLRDAN----VEVRCGVMDNEARALNIGFF 146


>gi|260593448|ref|ZP_05858906.1| riboflavin biosynthesis protein RibD [Prevotella veroralis F0319]
 gi|260534564|gb|EEX17181.1| riboflavin biosynthesis protein RibD [Prevotella veroralis F0319]
          Length = 331

 Score =  112 bits (282), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 39/156 (25%), Positives = 59/156 (37%), Gaps = 21/156 (13%)

Query: 1   MKK---GNVFMSCALEEAQNA-ALRNEIP-VGAVAV-LNNKIISRAGNRNRELKDVTAHA 54
           MK+      +M   L+ A N        P VGAV V    +II    +          HA
Sbjct: 6   MKQADIDEKYMRRCLQLAYNGMLKAKPNPMVGAVIVSKEGRIIGEGYHVQCGKG----HA 61

Query: 55  EILAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGG 108
           E+ A     + +   +L +  LYV+LEPC        CA  I    + R+  G  +P   
Sbjct: 62  EVNAF-ASVKEVDSHLLHDATLYVSLEPCSHYGKTPPCADLIIRKGVHRVVCGCIDPFAE 120

Query: 109 GIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
               G Q    A      E+  G+ E+   ++ + F
Sbjct: 121 VHGRGVQKLRDAG----IEVTVGVLEKECLELNKRF 152


>gi|261867792|ref|YP_003255714.1| riboflavin biosynthesis protein RibD [Aggregatibacter
           actinomycetemcomitans D11S-1]
 gi|261413124|gb|ACX82495.1| riboflavin biosynthesis protein RibD [Aggregatibacter
           actinomycetemcomitans D11S-1]
          Length = 374

 Score =  112 bits (282), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 40/159 (25%), Positives = 62/159 (38%), Gaps = 29/159 (18%)

Query: 3   KGNVFMSCALEEAQNAALRNE---IP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56
           +   FM  AL+ A+    + E    P   VG V V N KI+ +  +          HAE+
Sbjct: 8   QDVAFMQLALDLAK----QGEFTTTPNPSVGCVLVKNGKIVGKGFHFKAGE----PHAEV 59

Query: 57  LAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGI 110
           +A+R        E       YVTLEPC        CA  +  A + ++     +P     
Sbjct: 60  MALREAG-----ENARGATAYVTLEPCSHFGRTPPCAKGLVEAGVSKVIAAMCDPNPQVA 114

Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             G Q    A    +     G+ E+++ Q+ + F K  R
Sbjct: 115 GKGLQILADAGIQSAV----GLLEEKAEQLNKGFLKRMR 149


>gi|283471035|emb|CAQ50246.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp.
           aureus ST398]
          Length = 347

 Score =  112 bits (282), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 39/153 (25%), Positives = 65/153 (42%), Gaps = 26/153 (16%)

Query: 5   NVFMSCALEEAQNAALRNEI--PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
           + FM  A++ A     +  +  PVGAV V   +I+    +  +  K    HAE+ A+ M 
Sbjct: 2   SQFMDYAIQLANMVQGQTGVNPPVGAVVVKEGRIVGIGAHLRKGDK----HAEVQALDMA 57

Query: 63  CRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116
                Q+      +Y+TLEPC        C   I   +I ++ Y   +       N    
Sbjct: 58  -----QQNAEGATIYITLEPCSHFGSTPPCVNKIIDCKIAKVVYATKD-------NSLDT 105

Query: 117 YTLATC-HHSPEIYPGISEQRSRQIIQDFFKER 148
           +   T   H  E+   + ++R+ Q+ QDFFK +
Sbjct: 106 HGDETLRDHGIEVEC-VDDERASQLYQDFFKAK 137


>gi|282917028|ref|ZP_06324786.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp.
           aureus D139]
 gi|283770846|ref|ZP_06343738.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp.
           aureus H19]
 gi|282319515|gb|EFB49867.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp.
           aureus D139]
 gi|283460993|gb|EFC08083.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp.
           aureus H19]
          Length = 347

 Score =  112 bits (282), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 39/153 (25%), Positives = 65/153 (42%), Gaps = 26/153 (16%)

Query: 5   NVFMSCALEEAQNAALRNEI--PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
           + FM  A++ A     +  +  PVGAV V   +I+    +  +  K    HAE+ A+ M 
Sbjct: 2   SQFMDYAIQLANMVQGQTGVNPPVGAVVVKEGRIVGIGAHLRKGDK----HAEVQALDMA 57

Query: 63  CRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116
                Q+      +Y+TLEPC        C   I   +I ++ Y   +       N    
Sbjct: 58  -----QQNAEGATIYITLEPCSHFGSTPPCVNKIIDCKIAKVVYATKD-------NSLDT 105

Query: 117 YTLATC-HHSPEIYPGISEQRSRQIIQDFFKER 148
           +   T   H  E+   + ++R+ Q+ QDFFK +
Sbjct: 106 HGDETLRDHGIEVEC-VDDERASQLYQDFFKAK 137


>gi|169827319|ref|YP_001697477.1| riboflavin biosynthesis protein ribD [Lysinibacillus sphaericus
           C3-41]
 gi|168991807|gb|ACA39347.1| Riboflavin biosynthesis protein ribD [Lysinibacillus sphaericus
           C3-41]
          Length = 375

 Score =  112 bits (282), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 41/153 (26%), Positives = 61/153 (39%), Gaps = 25/153 (16%)

Query: 2   KKGNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57
            K   +M  AL+ A  A+ +      P VGAV V N+ I+    +R         HAE+ 
Sbjct: 8   TKDEKYMQLALDLA--ASAKGNTNPNPLVGAVIVKNDIIVGTGLHRKAGE----PHAEVH 61

Query: 58  AIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIE 111
           A RM              LYVTLEPC        CA  +  + + R+     +P      
Sbjct: 62  AFRMAGEHAQN-----ATLYVTLEPCSHFGKTPPCANLVKDSGVSRVVVAMQDPNPTVAG 116

Query: 112 NGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
            G Q    A       +  G+ EQ++R++ + F
Sbjct: 117 RGIQLLRDAG----ITVEVGVLEQQARRLNERF 145


>gi|291086763|ref|ZP_06344381.2| riboflavin biosynthesis protein RibD [Clostridium sp. M62/1]
 gi|291076874|gb|EFE14238.1| riboflavin biosynthesis protein RibD [Clostridium sp. M62/1]
          Length = 383

 Score =  112 bits (282), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 41/150 (27%), Positives = 60/150 (40%), Gaps = 21/150 (14%)

Query: 3   KGNVFMSCALEEAQN-AALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
               +M  A++ A+  A   N  P VGAV V +N+II +  +          HAE  A++
Sbjct: 19  SDTEYMKLAIKLAKKGAGYVNPNPMVGAVIVKDNRIIGQGYHEIFGGL----HAERNALK 74

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
             CR           LYVTLEPC        C  AI  + I R+  G  +        G 
Sbjct: 75  N-CRESP----VGATLYVTLEPCCHYGKTPPCTEAIIKSGITRVVVGTLDCNPIVSGKGV 129

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
           +           ++  GI E   +Q+I+ F
Sbjct: 130 KVLEENN----IQVVIGILEMECQQLIKVF 155


>gi|196037929|ref|ZP_03105239.1| riboflavin biosynthesis protein RibD [Bacillus cereus NVH0597-99]
 gi|196031199|gb|EDX69796.1| riboflavin biosynthesis protein RibD [Bacillus cereus NVH0597-99]
          Length = 367

 Score =  112 bits (282), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 44/153 (28%), Positives = 67/153 (43%), Gaps = 23/153 (15%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57
           M +  ++M  ALE A  A      P   VG+V V +N+I+    +          HAEI 
Sbjct: 1   MLEHELYMKLALENA-KAMKGQTTPNPLVGSVIVNDNRIVGIGAHMKAGE----PHAEIH 55

Query: 58  AIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIE 111
           AIRM       E      +YVTLEPC+       CA AI  A I+++     +P      
Sbjct: 56  AIRMAG-----EQARGGTIYVTLEPCSHHGRTGPCAEAIVQAGIKKVVVATLDPNPLVSG 110

Query: 112 NGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
            G +    A      E+  G+ E++S+++ + F
Sbjct: 111 RGIKILQDAG----IEVLVGVCEEKSKKMNEVF 139


>gi|322830058|gb|EFZ33221.1| deaminase, putative [Trypanosoma cruzi]
          Length = 333

 Score =  112 bits (282), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 40/157 (25%), Positives = 62/157 (39%), Gaps = 31/157 (19%)

Query: 22  NEIPVGAVAV------------------------LNNKIISRAGNRNRELKDVTAHAEIL 57
            E+PVG V V                        L N I +R  N   +     AHAE +
Sbjct: 162 GEVPVGCVLVPAEASCPANAGRLDDNNPNNSGASLGNLIAARGRNATNKEHHALAHAEFV 221

Query: 58  A----IRMGCRILSQE--ILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIE 111
           A    +R       +    L    LYV +EPC MCAA +   RI+++Y+G  NP+ GG  
Sbjct: 222 AVEALLRDAAEKGRKPPASLAGYVLYVVVEPCIMCAAMLLYNRIKKVYFGCGNPRFGGNG 281

Query: 112 NGTQFYTLATCH-HSPEIYPGISEQRSRQIIQDFFKE 147
                +   +    + E   G   + +  ++Q+F+  
Sbjct: 282 TVLAVHAAKSTSAPAYESCGGHRAEEAITLLQEFYSR 318


>gi|82751356|ref|YP_417097.1| riboflavin specific deaminase [Staphylococcus aureus RF122]
 gi|82656887|emb|CAI81317.1| riboflavin specific deaminase [Staphylococcus aureus RF122]
          Length = 347

 Score =  112 bits (282), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 39/153 (25%), Positives = 65/153 (42%), Gaps = 26/153 (16%)

Query: 5   NVFMSCALEEAQNAALRNEI--PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
           + FM  A++ A     +  +  PVGAV V   +I+    +  +  K    HAE+ A+ M 
Sbjct: 2   SQFMDYAIQLANMVQGQTGVNPPVGAVVVKEGRIVGIGAHLRKGDK----HAEVQALDMA 57

Query: 63  CRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116
                Q+      +Y+TLEPC        C   I   +I ++ Y   +       N    
Sbjct: 58  -----QQNAEGATIYITLEPCSHFGSTPPCVNKIIDCKIAKVVYATKD-------NSLDT 105

Query: 117 YTLATC-HHSPEIYPGISEQRSRQIIQDFFKER 148
           +   T   H  E+   + ++R+ Q+ QDFFK +
Sbjct: 106 HGDDTLRDHGIEVEC-VDDERASQLYQDFFKAK 137


>gi|318058022|ref|ZP_07976745.1| zinc-binding protein [Streptomyces sp. SA3_actG]
 gi|318076299|ref|ZP_07983631.1| zinc-binding protein [Streptomyces sp. SA3_actF]
          Length = 151

 Score =  112 bits (282), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 31/144 (21%), Positives = 56/144 (38%), Gaps = 13/144 (9%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIR 60
           ++   ++  A+EEA+       +P+GA     +  ++ R  NR  +  D ++H E  A R
Sbjct: 5   EQAQEWLRPAVEEARQGLAEGGVPIGAALYGADGALLGRGHNRRVQDADPSSHGETDAFR 64

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              R  +        +  TL PC  C+  I    I R+  G S    GG      +    
Sbjct: 65  KAGRQRT---YRGTTMVTTLSPCWYCSGLIKQFGITRVVIGESTTFKGG----EDWLEEQ 117

Query: 121 TCHHSPEIYPGISEQRSRQIIQDF 144
                 EI   +++     ++ +F
Sbjct: 118 G----VEIIR-LTDPECVDLMTEF 136


>gi|288803443|ref|ZP_06408875.1| riboflavin biosynthesis protein RibD [Prevotella melaninogenica
           D18]
 gi|288334053|gb|EFC72496.1| riboflavin biosynthesis protein RibD [Prevotella melaninogenica
           D18]
          Length = 365

 Score =  112 bits (282), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 36/152 (23%), Positives = 58/152 (38%), Gaps = 18/152 (11%)

Query: 2   KKGNVFMSCALEEAQNA--ALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILA 58
           +    +M   L+ A+N     +    VGAV V    +II    +          HAE+ A
Sbjct: 5   ETDEKYMRRCLQLARNGQLLAKPNPMVGAVIVSKEGRIIGEGYHVRCGKG----HAEVNA 60

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
                +     +L E  +YV+LEPC        CA  I    +RR+  G  +P       
Sbjct: 61  FASVSKEDEA-LLREATVYVSLEPCSHYGKTPPCADLIISKGVRRVVCGCIDPFAEVQGR 119

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
           G +    A      E+  G+ E+   ++ + F
Sbjct: 120 GVKKIREAG----IEVTVGVLEKECLELNKRF 147


>gi|256851712|ref|ZP_05557100.1| riboflavin biosynthesis protein RibD [Lactobacillus jensenii
           27-2-CHN]
 gi|260661570|ref|ZP_05862482.1| riboflavin biosynthesis protein RibD [Lactobacillus jensenii
           115-3-CHN]
 gi|256615670|gb|EEU20859.1| riboflavin biosynthesis protein RibD [Lactobacillus jensenii
           27-2-CHN]
 gi|260547627|gb|EEX23605.1| riboflavin biosynthesis protein RibD [Lactobacillus jensenii
           115-3-CHN]
          Length = 352

 Score =  112 bits (282), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 41/158 (25%), Positives = 65/158 (41%), Gaps = 22/158 (13%)

Query: 1   MKKGNVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           M K   FM+ A+  A            VGAV V + K+++   +          HAE  A
Sbjct: 2   MNKDEQFMALAINSASKGRYHTWTNPMVGAVVVKDGKVLATGYHHKYGD----VHAERDA 57

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
           I      L+ E L    LYVTLEPC        C+  I  ++I+R+     +P G     
Sbjct: 58  I----SKLTPEQLFNSTLYVTLEPCNHTGKQPPCSDLIIASKIKRVVISEIDPHGLVTGK 113

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQ--DFFKER 148
           G +        H+  +  G+  Q ++++ +  +FF E 
Sbjct: 114 GIKKLRS----HNISVTTGVLTQEAKKLNKHYNFFYEH 147


>gi|282933540|ref|ZP_06338910.1| riboflavin biosynthesis protein RibD [Lactobacillus jensenii 208-1]
 gi|297205330|ref|ZP_06922726.1| riboflavin biosynthesis protein RibD [Lactobacillus jensenii
           JV-V16]
 gi|281302283|gb|EFA94515.1| riboflavin biosynthesis protein RibD [Lactobacillus jensenii 208-1]
 gi|297149908|gb|EFH30205.1| riboflavin biosynthesis protein RibD [Lactobacillus jensenii
           JV-V16]
          Length = 351

 Score =  112 bits (282), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 41/158 (25%), Positives = 65/158 (41%), Gaps = 22/158 (13%)

Query: 1   MKKGNVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           M K   FM+ A+  A            VGAV V + K+++   +          HAE  A
Sbjct: 1   MNKDEQFMALAINSASKGRYHTWTNPMVGAVVVKDGKVLATGYHHKYGD----VHAERDA 56

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
           I      L+ E L    LYVTLEPC        C+  I  ++I+R+     +P G     
Sbjct: 57  I----SKLTPEQLFNSTLYVTLEPCNHTGKQPPCSDLIIASKIKRVVISEIDPHGLVTGK 112

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQ--DFFKER 148
           G +        H+  +  G+  Q ++++ +  +FF E 
Sbjct: 113 GIKKLRS----HNISVTTGVLTQEAKKLNKHYNFFYEH 146


>gi|308174118|ref|YP_003920823.1| fused diaminohydroxyphosphoribosylaminopyrimidine deaminase;
           5-amino-6-(5-phosphoribosylamino) uracil reductase
           [Bacillus amyloliquefaciens DSM 7]
 gi|307606982|emb|CBI43353.1| fused diaminohydroxyphosphoribosylaminopyrimidine deaminase;
           5-amino-6-(5-phosphoribosylamino) uracil reductase
           [Bacillus amyloliquefaciens DSM 7]
 gi|328552752|gb|AEB23244.1| fused diaminohydroxyphosphoribosylaminopyrimidine deaminase;
           5-amino-6-(5-phosphoribosylamino) uracil reductase
           [Bacillus amyloliquefaciens TA208]
 gi|328912449|gb|AEB64045.1| fused diaminohydroxyphosphoribosylaminopyrimidine deaminase;
           5-amino-6-(5-phosphoribosylamino) uracil reductase
           [Bacillus amyloliquefaciens LL3]
          Length = 371

 Score =  112 bits (282), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 40/148 (27%), Positives = 62/148 (41%), Gaps = 21/148 (14%)

Query: 5   NVFMSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
             +M+ A+E A+    + +  P VGAV V N +I+    +         AHAE+ AI M 
Sbjct: 3   EYYMNTAIELARRGEGQTQPNPLVGAVVVKNGQIVGMGAHLQYGE----AHAEVHAINMA 58

Query: 63  CRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116
                       DLYVTLEPC        CA  I  + I+R++    +P       G   
Sbjct: 59  G-----SHAKGADLYVTLEPCSHYGKTPPCAELIMKSGIKRVFIAVEDPNPLVAGKGITM 113

Query: 117 YTLATCHHSPEIYPGISEQRSRQIIQDF 144
              A      E+  G+  Q++ ++ + F
Sbjct: 114 LEAAG----IEVKTGLLRQQAEELNKMF 137


>gi|86142849|ref|ZP_01061288.1| riboflavin biosynthesis protein RibD [Leeuwenhoekiella blandensis
           MED217]
 gi|85830881|gb|EAQ49339.1| riboflavin biosynthesis protein RibD [Leeuwenhoekiella blandensis
           MED217]
          Length = 343

 Score =  112 bits (282), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 40/155 (25%), Positives = 69/155 (44%), Gaps = 26/155 (16%)

Query: 8   MSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
           MS  L+ A+N          P VG+V V  ++II    ++  +      HAE+ A+    
Sbjct: 1   MSRCLQLAKNGL--GNTYPNPMVGSVIVYEDRIIGEGWHQ--QAGQP--HAEVNAVNS-- 52

Query: 64  RILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFY 117
            +  Q +L +  +YV+LEPC        C+  I    I+++  G  +P       G +  
Sbjct: 53  -VNDQSLLDKATIYVSLEPCSHFGKTPPCSDLIIAKGIKKVVIGTVDPFAEVAGRGIKKL 111

Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDFF---KERR 149
             A C    E+  G+ EQ  +Q+ + FF   +++R
Sbjct: 112 IDAGC----EVLVGVLEQECQQLNKRFFTFHQKKR 142


>gi|165975842|ref|YP_001651435.1| riboflavin-specific deaminase [Actinobacillus pleuropneumoniae
           serovar 3 str. JL03]
 gi|165875943|gb|ABY68991.1| riboflavin-specific deaminase [Actinobacillus pleuropneumoniae
           serovar 3 str. JL03]
          Length = 364

 Score =  112 bits (282), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 35/151 (23%), Positives = 58/151 (38%), Gaps = 21/151 (13%)

Query: 3   KGNVFMSCALEEAQNAAL-RNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
               +M  A+  A+      N  P VG V V N +I++   +          HAE  A+ 
Sbjct: 2   TDLDYMRRAIALAKQGLGWTNPNPLVGCVIVKNGEIVAEGYHEKIGG----WHAERNAV- 56

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
               +  +E L     YVTLEPC        C+  +    I++++ G+S+P       G 
Sbjct: 57  ----LHCKEDLFGATAYVTLEPCCHHGRTPPCSDLLIERGIKKVFIGSSDPNPLVAGRGA 112

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
                A      E+  G+ ++    +   FF
Sbjct: 113 GQLRQAG----VEVVEGLLKEECDALNPIFF 139


>gi|255535790|ref|YP_003096161.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase
           [Flavobacteriaceae bacterium 3519-10]
 gi|255341986|gb|ACU08099.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase
           [Flavobacteriaceae bacterium 3519-10]
          Length = 342

 Score =  112 bits (281), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 33/158 (20%), Positives = 62/158 (39%), Gaps = 22/158 (13%)

Query: 3   KGNVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
              ++M   +E A+ A  +      VG+V V + +II    ++    K  + HAEI AI 
Sbjct: 2   TDELYMKRCIELAKKALGQTYPNPMVGSVIVHDGRIIGEGFHQ----KAGSPHAEINAIN 57

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
               +    +L +  +YV+LEPC        CA  ++    +++  G  +        G 
Sbjct: 58  S---VKDPSLLRDSTIYVSLEPCAHFGKTPPCADKLAEIGFKKVVIGILDSHDKVNGKGK 114

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFK---ERR 149
           Q       +   E+   +       + + FF    ++R
Sbjct: 115 QILE----NAGIEVVTDVLRNECFDLNKRFFAFQEKKR 148


>gi|327398273|ref|YP_004339142.1| CMP/dCMP deaminase zinc-binding protein [Hippea maritima DSM 10411]
 gi|327180902|gb|AEA33083.1| CMP/dCMP deaminase zinc-binding protein [Hippea maritima DSM 10411]
          Length = 183

 Score =  112 bits (281), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 35/152 (23%), Positives = 62/152 (40%), Gaps = 16/152 (10%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIR 60
           K+    M  A+E A+ +      P GA       K++S   N   + K    HAEI+A  
Sbjct: 23  KEDKEKMLFAIELAKLSIRNGGGPFGAAIFSKEGKLVSCGVNLVTKEKLSILHAEIVAFI 82

Query: 61  MGCRILSQEILPEV---DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENG---- 113
           M  + L    L E    +L+ + EPC MC  AI  + I+R+ +GA +     I       
Sbjct: 83  MAQKKLKTYSLSEAGYFELFSSSEPCAMCLGAILWSGIKRVVFGAYSDAARNIGFDEGPV 142

Query: 114 ----TQFYTLATCHHSPEIYPGISEQRSRQII 141
                 +      +    +  G+ + ++ +++
Sbjct: 143 FEASWNYLK----NKGIIVEGGLLKDKAAEVL 170


>gi|313898762|ref|ZP_07832296.1| riboflavin biosynthesis protein RibD [Clostridium sp. HGF2]
 gi|319935115|ref|ZP_08009555.1| riboflavin biosynthesis protein RibD [Coprobacillus sp. 29_1]
 gi|312956344|gb|EFR37978.1| riboflavin biosynthesis protein RibD [Clostridium sp. HGF2]
 gi|319809940|gb|EFW06323.1| riboflavin biosynthesis protein RibD [Coprobacillus sp. 29_1]
          Length = 366

 Score =  112 bits (281), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 41/150 (27%), Positives = 60/150 (40%), Gaps = 21/150 (14%)

Query: 3   KGNVFMSCALEEAQN-AALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
               +M  A++ A+  A   N  P VGAV V +N+II +  +          HAE  A++
Sbjct: 2   SDTEYMKLAIKLAKKGAGYVNPNPMVGAVIVKDNRIIGQGYHEIFGGL----HAERNALK 57

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
             CR           LYVTLEPC        C  AI  + I R+  G  +        G 
Sbjct: 58  N-CRESP----VGATLYVTLEPCCHYGKTPPCTEAIIKSGITRVVVGTLDCNPIVSGKGV 112

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
           +           ++  GI E   +Q+I+ F
Sbjct: 113 KVLEENN----IQVVIGILEMECQQLIKVF 138


>gi|258424182|ref|ZP_05687064.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus A9635]
 gi|257845803|gb|EEV69835.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus A9635]
          Length = 347

 Score =  112 bits (281), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 39/153 (25%), Positives = 65/153 (42%), Gaps = 26/153 (16%)

Query: 5   NVFMSCALEEAQNAALRNEI--PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
           + FM  A++ A     +  +  PVGAV V   +I+    +  +  K    HAE+ A+ M 
Sbjct: 2   SQFMDYAIQLANMVQGQTGVNPPVGAVVVKEGRIVGIGAHLRKGDK----HAEVQALDMA 57

Query: 63  CRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116
                Q+      +Y+TLEPC        C   I   +I ++ Y   +       N    
Sbjct: 58  -----QQNAEGATIYITLEPCSHFGSTPPCVNKIIDCKIAKVVYATKD-------NSLNT 105

Query: 117 YTLATC-HHSPEIYPGISEQRSRQIIQDFFKER 148
           +   T   H  E+   + ++R+ Q+ QDFFK +
Sbjct: 106 HGDETLRDHGIEVEC-VDDERASQLYQDFFKAK 137


>gi|309778325|ref|ZP_07673252.1| riboflavin biosynthesis protein RibD [Erysipelotrichaceae bacterium
           3_1_53]
 gi|308913921|gb|EFP59734.1| riboflavin biosynthesis protein RibD [Erysipelotrichaceae bacterium
           3_1_53]
          Length = 366

 Score =  112 bits (281), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 41/150 (27%), Positives = 60/150 (40%), Gaps = 21/150 (14%)

Query: 3   KGNVFMSCALEEAQN-AALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
               +M  A++ A+  A   N  P VGAV V +N+II +  +          HAE  A++
Sbjct: 2   SDTEYMKLAIKLAKKGAGYVNPNPMVGAVIVKDNRIIGQGYHEIFGGL----HAERNALK 57

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
             CR           LYVTLEPC        C  AI  + I R+  G  +        G 
Sbjct: 58  N-CRESP----VGATLYVTLEPCCHYGKTPPCTEAIIKSGITRVVVGTLDCNPIVSGKGV 112

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
           +           ++  GI E   +Q+I+ F
Sbjct: 113 KVLEENN----IQVVIGILEMECQQLIKVF 138


>gi|289423250|ref|ZP_06425061.1| riboflavin biosynthesis protein RibD [Peptostreptococcus anaerobius
           653-L]
 gi|289156350|gb|EFD05004.1| riboflavin biosynthesis protein RibD [Peptostreptococcus anaerobius
           653-L]
          Length = 433

 Score =  112 bits (281), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 38/157 (24%), Positives = 65/157 (41%), Gaps = 23/157 (14%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56
           ++K   +M  AL+ A+    R  +   P VGAV V +++II +  +          HAE 
Sbjct: 7   LEKDQHYMKIALDLAKRGIAR--VSPNPLVGAVIVKDDQIIGKGYHEKYGGL----HAER 60

Query: 57  LAIRMG-CRILSQEIL--PEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKG 107
            AI+    R ++   L      +YVTLEPC        C  AI   +I+R+   + +P  
Sbjct: 61  NAIKDYKNRAINDPNLTIEGATMYVTLEPCCHYGKTPPCTEAIIENKIKRVVVASLDPNP 120

Query: 108 GGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
                G +           E+  G+ +  + +  + F
Sbjct: 121 LVAGKGVKILEEVG----IEVDIGVLKDEADRQNRIF 153


>gi|325977849|ref|YP_004287565.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Streptococcus gallolyticus subsp. gallolyticus ATCC
           BAA-2069]
 gi|325177777|emb|CBZ47821.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Streptococcus gallolyticus subsp. gallolyticus ATCC
           BAA-2069]
          Length = 351

 Score =  112 bits (281), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 39/145 (26%), Positives = 59/145 (40%), Gaps = 19/145 (13%)

Query: 4   GNVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
              +M+ A+ EA+    +      VGAV V N ++I+R  +     +    HAE  AI  
Sbjct: 2   HENYMAQAIAEAKKGFRQTYTNPLVGAVIVKNGRVIARGAHLQYGHE----HAEKNAI-- 55

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
                + E L    LYVTLEPC        C  AI  A I+++  G  +P       G +
Sbjct: 56  -LYCEAPEELANSTLYVTLEPCHHTGKQPPCTQAIVEAGIKKVVVGQLDPNPLVAGKGLE 114

Query: 116 FYTLATCHHSPEIYPGISEQRSRQI 140
           F          E+   + E  +R +
Sbjct: 115 FLKSQG----IEVVTQVLENEARAL 135


>gi|256751435|ref|ZP_05492313.1| riboflavin biosynthesis protein RibD [Thermoanaerobacter
           ethanolicus CCSD1]
 gi|256749654|gb|EEU62680.1| riboflavin biosynthesis protein RibD [Thermoanaerobacter
           ethanolicus CCSD1]
          Length = 360

 Score =  112 bits (281), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 40/148 (27%), Positives = 62/148 (41%), Gaps = 21/148 (14%)

Query: 5   NVFMSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
             +M  AL  A+         P VGAV V N KII    +          HAE+ A++  
Sbjct: 2   EEYMKRALTLAEKGWGHTNPNPLVGAVIVKNGKIIGEGYHEYFGG----PHAEVNALKNA 57

Query: 63  CRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116
                 E +    ++VTLEPC        C   I  + I+R+Y    +P      NG + 
Sbjct: 58  V-----EDVKGSTMFVTLEPCSHYGKTPPCVEEIIKSGIKRVYIAMEDPNPKVSGNGIKR 112

Query: 117 YTLATCHHSPEIYPGISEQRSRQIIQDF 144
              A      E++ GI E+++R++ + F
Sbjct: 113 LKEAG----IEVHVGIMEKKARKLNEIF 136


>gi|67078030|ref|YP_245650.1| riboflavin biosynthesis protein
           (diaminohydroxyphosphoribosylaminopyrimidine deaminase
           (riboflavin-specific deaminase) and
           5-amino-6-(5-phosphoribosylamino)uracil reductase)
           [Bacillus cereus E33L]
 gi|66970336|gb|AAY60312.1| riboflavin biosynthesis protein
           (diaminohydroxyphosphoribosylaminopyrimidine deaminase
           (riboflavin-specific deaminase) and
           5-amino-6-(5-phosphoribosylamino)uracil reductase)
           [Bacillus cereus E33L]
          Length = 367

 Score =  112 bits (281), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 44/153 (28%), Positives = 67/153 (43%), Gaps = 23/153 (15%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57
           M +  ++M  ALE A  A      P   VG+V V +N+I+    +          HAEI 
Sbjct: 1   MLEHELYMKLALENA-KAMKGQTTPNPLVGSVIVNDNRIVGIGAHMKAGE----PHAEIH 55

Query: 58  AIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIE 111
           AIRM       E      +YVTLEPC+       CA AI  A I+++     +P      
Sbjct: 56  AIRMAG-----EQARGGTIYVTLEPCSHHGRTGPCAEAIVQAGIKKVVVATLDPNPLVSG 110

Query: 112 NGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
            G +    A      E+  G+ E++S+++ + F
Sbjct: 111 RGIKILQDAG----IEVLVGVCEEKSKKMNEVF 139


>gi|226324277|ref|ZP_03799795.1| hypothetical protein COPCOM_02056 [Coprococcus comes ATCC 27758]
 gi|225206725|gb|EEG89079.1| hypothetical protein COPCOM_02056 [Coprococcus comes ATCC 27758]
          Length = 370

 Score =  112 bits (281), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 38/151 (25%), Positives = 51/151 (33%), Gaps = 21/151 (13%)

Query: 3   KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
               +M  A+E A+      N  P VGAV V +  II    +          HAE  AI 
Sbjct: 2   TDEFYMRRAIELAKKGRGWTNPNPMVGAVIVKDGSIIGEGYHEKCGEL----HAERNAI- 56

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
                   E      LYVTLEPC        C  AI   +I R+  G+ +P       G 
Sbjct: 57  ----ASLTESAEGATLYVTLEPCCHYGKTPPCTEAILEQKIARVVIGSRDPNPKVSGKGA 112

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
           +    A       +      +    +   FF
Sbjct: 113 KILREAG----VRVEEDFLREECDALNPVFF 139


>gi|157092991|gb|ABV22150.1| cytidine/deoxycytidylate deaminase [Perkinsus chesapeaki]
          Length = 295

 Score =  112 bits (281), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 37/104 (35%), Positives = 46/104 (44%), Gaps = 3/104 (2%)

Query: 2   KKGNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
           K    FM+ A   A           P GA  V N   +S   N     KD T HAE+ AI
Sbjct: 18  KVDECFMTAACMSANAGVILCHGG-PFGASVVHNGMPVSCGHNTVLFDKDPTCHAEVNAI 76

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
           R   R L +  L +  LY T EPC MC  AI  + ++ +Y GA 
Sbjct: 77  RHAVRDLGRSELSDCVLYTTCEPCPMCWGAIMASGLKVIYVGAD 120



 Score = 52.2 bits (125), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 25/145 (17%), Positives = 45/145 (31%), Gaps = 14/145 (9%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAI 59
            +   +MS   + A ++          V V     +++  + +R  +L D      + AI
Sbjct: 155 DEDEKWMS---KLASHSH---------VIVVSAAGELVGDSLSRGSDLGDALDTPMVRAI 202

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
           RM    L    L    +Y + +P      A   ARI  L+Y              Q   L
Sbjct: 203 RMAAMTLGTHELSGCKVYASTQPDVFSHCACLWARISELFYAEPAADESEASYERQQLAL 262

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDF 144
                      G +      + + +
Sbjct: 263 KAEDRDLTTVWGCAVDECENVFKQW 287


>gi|332703475|ref|ZP_08423563.1| riboflavin biosynthesis protein RibD [Desulfovibrio africanus str.
           Walvis Bay]
 gi|332553624|gb|EGJ50668.1| riboflavin biosynthesis protein RibD [Desulfovibrio africanus str.
           Walvis Bay]
          Length = 380

 Score =  112 bits (281), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 43/152 (28%), Positives = 60/152 (39%), Gaps = 18/152 (11%)

Query: 1   MKKGNVFMSCALEEAQN--AALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           M    +FM  ALE A+           VGAV V + ++++   ++         HAE  A
Sbjct: 1   MTDHAIFMRRALELAERCRGFTAPNPCVGAVLVRDGQVVAEGWHKIYGG----PHAEREA 56

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
           I               D+YVTLEPC        C  AI  A IRR++ G  +        
Sbjct: 57  IADARAKGVDT--STCDMYVTLEPCSHHGKTPPCTEAILEAGIRRVFVGCKDLNPTVPGR 114

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
           GT++          ++  GI EQ  R  I DF
Sbjct: 115 GTEYL----LSKGVQVELGILEQECRDAIADF 142


>gi|325953844|ref|YP_004237504.1| riboflavin biosynthesis protein RibD [Weeksella virosa DSM 16922]
 gi|323436462|gb|ADX66926.1| riboflavin biosynthesis protein RibD [Weeksella virosa DSM 16922]
          Length = 345

 Score =  112 bits (281), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 45/161 (27%), Positives = 68/161 (42%), Gaps = 26/161 (16%)

Query: 2   KKGNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57
           +    +M+  L+ A N          P VG+V V N  II               HAE+ 
Sbjct: 5   RTDEFYMNRCLQLAANGL--GNTYPNPFVGSVIVHNQNIIGEGFTSFYGG----PHAEVN 58

Query: 58  AIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIE 111
           AI     +  +E+LP   LYVTLEPC        C+  I   +I R+  G  +P    + 
Sbjct: 59  AIHS---VEKKELLPSSTLYVTLEPCAHFGKTPPCSDLIIEHKIPRVVVGCLDPF--ALV 113

Query: 112 NGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF---KERR 149
           NG     + T  H  E+  GI E+   ++ + FF   +++R
Sbjct: 114 NGEGINRMRT--HGIEVSVGILEKECLELNRRFFTIHQKKR 152


>gi|320142810|gb|EFW34610.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp.
           aureus MRSA177]
          Length = 357

 Score =  112 bits (281), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 39/153 (25%), Positives = 65/153 (42%), Gaps = 26/153 (16%)

Query: 5   NVFMSCALEEAQNAALRNEI--PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
           + FM  A++ A     +  +  PVGAV V   +I+    +  +  K    HAE+ A+ M 
Sbjct: 12  SQFMDYAIQLANMVQGQTGVNPPVGAVVVKEGRIVGIGAHLRKGDK----HAEVQALDMA 67

Query: 63  CRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116
                Q+      +Y+TLEPC        C   I   +I ++ Y   +       N    
Sbjct: 68  -----QQNAEGATIYITLEPCSHFGSTPPCVNKIIDCKIAKVVYATKD-------NSLDT 115

Query: 117 YTLATCH-HSPEIYPGISEQRSRQIIQDFFKER 148
           +   T   H  E+   + ++R+ Q+ QDFFK +
Sbjct: 116 HGDETLRAHGIEVEC-VDDERASQLYQDFFKAK 147


>gi|282927316|ref|ZP_06334937.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus A9765]
 gi|282592080|gb|EFB97105.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus A9765]
          Length = 347

 Score =  112 bits (281), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 39/153 (25%), Positives = 65/153 (42%), Gaps = 26/153 (16%)

Query: 5   NVFMSCALEEAQNAALRNEI--PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
           + FM  A++ A     +  +  PVGAV V   +I+    +  +  K    HAE+ A+ M 
Sbjct: 2   SQFMDYAIQLANMVQGQTGVNPPVGAVVVKEGRIVGIGAHLRKGDK----HAEVQALDMA 57

Query: 63  CRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116
                Q+      +Y+TLEPC        C   I   +I ++ Y   +       N    
Sbjct: 58  -----QQNAEGATIYITLEPCSHFGSTPPCVNKIIDCKIAKVVYATKD-------NSLDT 105

Query: 117 YTLATCH-HSPEIYPGISEQRSRQIIQDFFKER 148
           +   T   H  E+   + ++R+ Q+ QDFFK +
Sbjct: 106 HGDETLRAHGIEVEC-VDDERASQLYQDFFKAK 137


>gi|258510931|ref|YP_003184365.1| riboflavin biosynthesis protein RibD [Alicyclobacillus
           acidocaldarius subsp. acidocaldarius DSM 446]
 gi|257477657|gb|ACV57976.1| riboflavin biosynthesis protein RibD [Alicyclobacillus
           acidocaldarius subsp. acidocaldarius DSM 446]
          Length = 371

 Score =  112 bits (281), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 39/153 (25%), Positives = 61/153 (39%), Gaps = 21/153 (13%)

Query: 1   MKKGNVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           M +   +M  ALE A+    +      VGA+ V   +++ +  +        T HAE+ A
Sbjct: 1   MTEDERYMRMALEVARLGEGQTSPNPMVGAIVVNGGRVVGQGAHLMA----GTPHAEVHA 56

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
           +RM              LYVTLEPC        C  AI    +RR+   A +        
Sbjct: 57  LRMAGDAAQ-----GATLYVTLEPCNHHGRTPPCTDAILATGVRRVVVAALDVDPRTAGL 111

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
           G +    A      E+  G+ E  +R++ + FF
Sbjct: 112 GVKRLQEAG----IEVTVGVLEAEARELNRHFF 140


>gi|57652067|ref|YP_186652.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp.
           aureus COL]
 gi|151221874|ref|YP_001332696.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp.
           aureus str. Newman]
 gi|161509986|ref|YP_001575645.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase
           [Staphylococcus aureus subsp. aureus USA300_TCH1516]
 gi|258450849|ref|ZP_05698907.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus A5948]
 gi|262050319|ref|ZP_06023164.1| riboflavin specific deaminase [Staphylococcus aureus D30]
 gi|262053078|ref|ZP_06025250.1| riboflavin specific deaminase [Staphylococcus aureus 930918-3]
 gi|284024817|ref|ZP_06379215.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase
           [Staphylococcus aureus subsp. aureus 132]
 gi|294849930|ref|ZP_06790669.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus A9754]
 gi|304380637|ref|ZP_07363309.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp.
           aureus ATCC BAA-39]
 gi|57286253|gb|AAW38347.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp.
           aureus COL]
 gi|150374674|dbj|BAF67934.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp.
           aureus str. Newman]
 gi|160368795|gb|ABX29766.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase
           [Staphylococcus aureus subsp. aureus USA300_TCH1516]
 gi|257861473|gb|EEV84276.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus A5948]
 gi|259159032|gb|EEW44104.1| riboflavin specific deaminase [Staphylococcus aureus 930918-3]
 gi|259161579|gb|EEW46176.1| riboflavin specific deaminase [Staphylococcus aureus D30]
 gi|269941247|emb|CBI49636.1| bifunctional riboflavin biosynthesis protein [Staphylococcus aureus
           subsp. aureus TW20]
 gi|294823269|gb|EFG39699.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus A9754]
 gi|304340832|gb|EFM06760.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp.
           aureus ATCC BAA-39]
 gi|315195936|gb|EFU26300.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase
           [Staphylococcus aureus subsp. aureus CGS01]
 gi|329314447|gb|AEB88860.1| Riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp.
           aureus T0131]
 gi|329727002|gb|EGG63459.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp.
           aureus 21189]
          Length = 347

 Score =  112 bits (281), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 39/153 (25%), Positives = 65/153 (42%), Gaps = 26/153 (16%)

Query: 5   NVFMSCALEEAQNAALRNEI--PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
           + FM  A++ A     +  +  PVGAV V   +I+    +  +  K    HAE+ A+ M 
Sbjct: 2   SQFMDYAIQLANMVQGQTGVNPPVGAVVVKEGRIVGIGAHLRKGDK----HAEVQALDMA 57

Query: 63  CRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116
                Q+      +Y+TLEPC        C   I   +I ++ Y   +       N    
Sbjct: 58  -----QQNAEGATIYITLEPCSHFGSTPPCVNKIIDCKIAKVVYATKD-------NSLDT 105

Query: 117 YTLATCH-HSPEIYPGISEQRSRQIIQDFFKER 148
           +   T   H  E+   + ++R+ Q+ QDFFK +
Sbjct: 106 HGDETLRAHGIEVEC-VDDERASQLYQDFFKAK 137


>gi|126650091|ref|ZP_01722324.1| riboflavin specific deaminase [Bacillus sp. B14905]
 gi|126593263|gb|EAZ87225.1| riboflavin specific deaminase [Bacillus sp. B14905]
          Length = 375

 Score =  112 bits (281), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 42/153 (27%), Positives = 63/153 (41%), Gaps = 25/153 (16%)

Query: 2   KKGNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57
            K   +M  AL+ A  A+ +      P VGAV V N+ I+    +R         HAE+ 
Sbjct: 8   NKDEKYMQLALDLA--ASAKGNTNPNPLVGAVIVKNDIIVGTGLHRKAGE----PHAEVH 61

Query: 58  AIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIE 111
           A RM              LYVTLEPC        CA  +  + + R+     +P      
Sbjct: 62  AFRMAGEHAKN-----ATLYVTLEPCSHFGKTPPCANLVKESGVSRVVVAMQDPNPTVAG 116

Query: 112 NGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
            G Q    A    + E+  G+ EQ++R++ + F
Sbjct: 117 RGIQLLRDAGI--AVEV--GVLEQQARRLNERF 145


>gi|167846243|ref|ZP_02471751.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia
           pseudomallei B7210]
          Length = 141

 Score =  112 bits (281), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 41/99 (41%), Positives = 58/99 (58%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           ++   +M  AL  A+ A    E+PVGAV V  +++I+R  N      D +AHAE+ A+R 
Sbjct: 43  ERDRRYMRLALAAAEEARAAGEVPVGAVIVRGDEVIARGFNHPIGGHDPSAHAEMAALRA 102

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
             R L    +P  +LYVTLEPC MC+ AI  ARI R+ +
Sbjct: 103 AARALRNYRMPGCELYVTLEPCLMCSGAIMHARIARVVF 141


>gi|310657724|ref|YP_003935445.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino) uracil
           reductase [Clostridium sticklandii DSM 519]
 gi|308824502|emb|CBH20540.1| fused diaminohydroxyphosphoribosylaminopyrimidine deaminase;
           5-amino-6-(5-phosphoribosylamino) uracil reductase
           [Clostridium sticklandii]
          Length = 382

 Score =  112 bits (281), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 38/145 (26%), Positives = 58/145 (40%), Gaps = 25/145 (17%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56
           ++    FM  AL  A+    R  +   P VGAV V + K+I    +         +HAEI
Sbjct: 18  LESDEKFMKLALSLAEKG--RGYVNPNPLVGAVIVKDGKVIGEGYHTAFGK----SHAEI 71

Query: 57  LAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGI 110
            AI         E +    +YVTLEPC        C  AI   ++ R+    ++P     
Sbjct: 72  EAINSA-----TEDIKSATMYVTLEPCCHQGKTPPCTEAIIKNQLARVVVATTDPNPLVS 126

Query: 111 ENGTQFYTLATCHHSPEIYPGISEQ 135
            +G +    +      EI  G+ E+
Sbjct: 127 GSGIEKLKQSN----IEITVGVLEE 147


>gi|306830959|ref|ZP_07464121.1| riboflavin biosynthesis protein RibD [Streptococcus gallolyticus
           subsp. gallolyticus TX20005]
 gi|304426982|gb|EFM30092.1| riboflavin biosynthesis protein RibD [Streptococcus gallolyticus
           subsp. gallolyticus TX20005]
          Length = 351

 Score =  112 bits (281), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 39/145 (26%), Positives = 59/145 (40%), Gaps = 19/145 (13%)

Query: 4   GNVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
              +M+ A+ EA+    +      VGAV V N ++I+R  +     +    HAE  AI  
Sbjct: 2   HENYMAQAIAEAKKGFRQTYTNPLVGAVIVKNGRVIARGAHLQYGHE----HAEKNAI-- 55

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
                + E L    LYVTLEPC        C  AI  A I+++  G  +P       G +
Sbjct: 56  -LYCEAPEELANSTLYVTLEPCHHTGKQPPCTQAIVEAGIKKVVVGQLDPNPLVAGKGLE 114

Query: 116 FYTLATCHHSPEIYPGISEQRSRQI 140
           F          E+   + E  +R +
Sbjct: 115 FLKSQG----IEVVTQVLENEARAL 135


>gi|148987916|ref|ZP_01819379.1| riboflavin synthase subunit alpha [Streptococcus pneumoniae
           SP6-BS73]
 gi|147926380|gb|EDK77453.1| riboflavin synthase subunit alpha [Streptococcus pneumoniae
           SP6-BS73]
          Length = 366

 Score =  112 bits (281), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 40/150 (26%), Positives = 59/150 (39%), Gaps = 21/150 (14%)

Query: 3   KGNVFMSCALEEAQN-AALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
             + +M  A++ AQ  A   N  P VGA+ V +N II +  +          HAE  A++
Sbjct: 2   SDSKYMKLAIKLAQKGAGYVNPNPMVGAIIVKDNHIIGQGYHEFFGG----PHAERNALK 57

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
             CR           LYVTLEPC        C  AI  + I R+  G+ +        G 
Sbjct: 58  N-CRESP----VGATLYVTLEPCCHFGKTPPCIDAIIDSGITRVVIGSLDCNPIVSGKGV 112

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
           +           ++  GI E     +I+ F
Sbjct: 113 KILEENNL----QVTVGILENECLNLIKSF 138


>gi|167036452|ref|YP_001664030.1| riboflavin biosynthesis protein RibD [Thermoanaerobacter
           pseudethanolicus ATCC 33223]
 gi|320114877|ref|YP_004185036.1| riboflavin biosynthesis protein RibD [Thermoanaerobacter brockii
           subsp. finnii Ako-1]
 gi|166855286|gb|ABY93694.1| riboflavin biosynthesis protein RibD [Thermoanaerobacter
           pseudethanolicus ATCC 33223]
 gi|319927968|gb|ADV78653.1| riboflavin biosynthesis protein RibD [Thermoanaerobacter brockii
           subsp. finnii Ako-1]
          Length = 360

 Score =  112 bits (281), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 40/148 (27%), Positives = 62/148 (41%), Gaps = 21/148 (14%)

Query: 5   NVFMSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
             +M  AL  A+         P VGAV V N KII    +          HAE+ A++  
Sbjct: 2   EEYMKRALTLAEKGWGHTNPNPLVGAVIVKNGKIIGEGYHEYFGG----PHAEVNALKNA 57

Query: 63  CRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116
                 E +    ++VTLEPC        C   I  + I+R+Y    +P      NG + 
Sbjct: 58  V-----EDVKGSTMFVTLEPCSHYGKTPPCVEEIIKSGIKRVYIAMEDPNPKVSGNGIKR 112

Query: 117 YTLATCHHSPEIYPGISEQRSRQIIQDF 144
              A      E++ GI E+++R++ + F
Sbjct: 113 LKEAG----IEVHVGIMEKKARKLNEIF 136


>gi|52841362|ref|YP_095161.1| cytidine/deoxycytidylate deaminase [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
 gi|54294070|ref|YP_126485.1| hypothetical protein lpl1134 [Legionella pneumophila str. Lens]
 gi|54297084|ref|YP_123453.1| hypothetical protein lpp1129 [Legionella pneumophila str. Paris]
 gi|52628473|gb|AAU27214.1| cytidine/deoxycytidylate deaminase [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
 gi|53750869|emb|CAH12280.1| hypothetical protein lpp1129 [Legionella pneumophila str. Paris]
 gi|53753902|emb|CAH15373.1| hypothetical protein lpl1134 [Legionella pneumophila str. Lens]
          Length = 154

 Score =  112 bits (281), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 31/94 (32%), Positives = 46/94 (48%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           F+   +E A+        P   + V N KI++ A N   +  D TAHAE+ AIR+    L
Sbjct: 3   FIKRTIELARENVGHGGRPFACLIVQNGKILAEATNTVAQTHDPTAHAEVNAIRIATAKL 62

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
             E L + D Y+   PC MC AA+     R++ +
Sbjct: 63  GCEHLYDCDFYILAHPCPMCLAAMYYCSPRKVIF 96


>gi|238755138|ref|ZP_04616485.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Yersinia ruckeri
           ATCC 29473]
 gi|238706698|gb|EEP99068.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Yersinia ruckeri
           ATCC 29473]
          Length = 369

 Score =  112 bits (281), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 39/157 (24%), Positives = 56/157 (35%), Gaps = 21/157 (13%)

Query: 1   MKKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           M    ++M+ A E A+      +  P VG V V + KI+    +          HAE+ A
Sbjct: 1   MHPDEIYMARAFELARLGRFTTSPNPNVGCVIVRDGKIVGEGYHLRAGE----PHAEVHA 56

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
           +RM               YVTLEPC        CA A+  A IRR+     +P       
Sbjct: 57  LRMAGDAA-----RGATAYVTLEPCSHHGRTPPCADALVAAGIRRVVTAMQDPNPQVAGR 111

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
           G      A       +  G+    +  +   F K  R
Sbjct: 112 GLYQLKQAG----ITVEHGLMLAEAEAVNLGFLKRMR 144


>gi|315443623|ref|YP_004076502.1| cytosine/adenosine deaminase [Mycobacterium sp. Spyr1]
 gi|315261926|gb|ADT98667.1| cytosine/adenosine deaminase [Mycobacterium sp. Spyr1]
          Length = 146

 Score =  111 bits (280), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 32/141 (22%), Positives = 54/141 (38%), Gaps = 13/141 (9%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +  A+EEA+       IP+GA     +  ++    NR  +L D + HAE  A R   R  
Sbjct: 7   LDVAVEEARKGLAEGGIPIGAALFAADGTLLGSGHNRRVQLDDPSLHAETDAFRNAGRQR 66

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
                    +  TL PC  C+  +    I  +  G S    GG              H  
Sbjct: 67  G---YRSTTMVTTLSPCWYCSGLVRQFNIGAVVIGESRTFTGG--------HHWLAEHGV 115

Query: 127 EIYPGISEQRSRQIIQDFFKE 147
           ++   + ++R   +++DF  +
Sbjct: 116 KVTV-VDDERCVTLMRDFIAD 135


>gi|312171548|emb|CBX79806.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Erwinia amylovora ATCC BAA-2158]
          Length = 367

 Score =  111 bits (280), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 36/154 (23%), Positives = 56/154 (36%), Gaps = 21/154 (13%)

Query: 4   GNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
              +M+ ALE A+         P VG V V +++I+    +          HAE+ A+RM
Sbjct: 3   DEAYMARALELARRGRFTTTPNPNVGCVLVRDDQIVGEGYHMRAGE----PHAEVHALRM 58

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
                          YVTLEPC        C  A+  A ++R+     +P       G  
Sbjct: 59  AGEKS-----RGATAYVTLEPCSHHGRTPPCCEALIAAGVKRVVTAMQDPNPQVAGRGLY 113

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
               A      E+  G+    +  + + F K  R
Sbjct: 114 RLQQAG----IEVSHGMMMPEAEALNRGFLKRMR 143


>gi|261346387|ref|ZP_05974031.1| riboflavin biosynthesis protein RibD [Providencia rustigianii DSM
           4541]
 gi|282565705|gb|EFB71240.1| riboflavin biosynthesis protein RibD [Providencia rustigianii DSM
           4541]
          Length = 371

 Score =  111 bits (280), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 35/157 (22%), Positives = 61/157 (38%), Gaps = 21/157 (13%)

Query: 1   MKKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           +++  ++M+ A E A+      +  P VG V V + +++    ++         HAE+ A
Sbjct: 2   LEQDRIYMARAFELARKGRFTTSPNPNVGCVIVRDGEVVGEGYHQKAGE----PHAEVHA 57

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
           +RM               YVTLEPC        CA A+  A + R+     +P       
Sbjct: 58  LRMAGDKA-----RGATAYVTLEPCSHHGRTPPCAEALIKAGVSRVVASMQDPNPQVAGR 112

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
           G    + A      E    I  +++  + + F K  R
Sbjct: 113 GLYMLSQAG----IETSSNILLEQAEALNRGFLKRMR 145


>gi|21283440|ref|NP_646528.1| riboflavin specific deaminase [Staphylococcus aureus subsp. aureus
           MW2]
 gi|49486593|ref|YP_043814.1| bifunctional riboflavin biosynthesis protein [Staphylococcus aureus
           subsp. aureus MSSA476]
 gi|297207517|ref|ZP_06923953.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp.
           aureus ATCC 51811]
 gi|300911601|ref|ZP_07129045.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp.
           aureus TCH70]
 gi|21204881|dbj|BAB95576.1| riboflavin specific deaminase [Staphylococcus aureus subsp. aureus
           MW2]
 gi|49245036|emb|CAG43497.1| bifunctional riboflavin biosynthesis protein [Staphylococcus aureus
           subsp. aureus MSSA476]
 gi|296887853|gb|EFH26750.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp.
           aureus ATCC 51811]
 gi|300887022|gb|EFK82223.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp.
           aureus TCH70]
          Length = 347

 Score =  111 bits (280), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 39/153 (25%), Positives = 65/153 (42%), Gaps = 26/153 (16%)

Query: 5   NVFMSCALEEAQNAALRNEI--PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
           + FM  A++ A     +  +  PVGAV V   +I+    +  +  K    HAE+ A+ M 
Sbjct: 2   SQFMDYAIQLANMVQGQTGVNPPVGAVVVKEGRIVGIGAHLRKGDK----HAEVQALDMA 57

Query: 63  CRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116
                Q+      +Y+TLEPC        C   I   +I ++ Y   +       N    
Sbjct: 58  -----QQNAEGATIYITLEPCSHFGSTPPCVNKIIDCKITKVVYATKD-------NSLDT 105

Query: 117 YTLATCH-HSPEIYPGISEQRSRQIIQDFFKER 148
           +   T   H  E+   + ++R+ Q+ QDFFK +
Sbjct: 106 HGDETLRAHGIEVEC-VDDERASQLYQDFFKAK 137


>gi|170760325|ref|YP_001788192.1| riboflavin biosynthesis protein RibD [Clostridium botulinum A3 str.
           Loch Maree]
 gi|169407314|gb|ACA55725.1| riboflavin biosynthesis protein RibD [Clostridium botulinum A3 str.
           Loch Maree]
          Length = 365

 Score =  111 bits (280), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 39/156 (25%), Positives = 60/156 (38%), Gaps = 25/156 (16%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56
           M+  N +M  AL+ A+      ++   P VGA+ V NNKII    ++         HAE+
Sbjct: 1   MEDYNFYMEKALKLAERG--EGKVNPNPKVGAIVVKNNKIIGEGYHKYFGG----PHAEV 54

Query: 57  LAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGI 110
            A+R               +Y+TLEPC        CA  I    I +      +P     
Sbjct: 55  YALREASEKA-----KGATMYITLEPCSHYGKTPPCAEYIVKMGISKAIIAMKDPNPLVE 109

Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
             G             E+   I E+ S+++ + F K
Sbjct: 110 GRGIDILKQNG----IEVVTEIMEKESKKLNEVFIK 141


>gi|254491989|ref|ZP_05105167.1| riboflavin biosynthesis protein RibD [Methylophaga thiooxidans
           DMS010]
 gi|224462804|gb|EEF79075.1| riboflavin biosynthesis protein RibD [Methylophaga thiooxydans
           DMS010]
          Length = 368

 Score =  111 bits (280), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 38/157 (24%), Positives = 63/157 (40%), Gaps = 21/157 (13%)

Query: 1   MKKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           M     FM+ A++ A+      +  P VG V V N++II    +          HAE+ A
Sbjct: 1   MPSPEHFMARAIQLAERGLYTTDPNPRVGCVIVKNDEIIGEGWHMRAGEG----HAEVNA 56

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
           I+              D YVTLEPC        C  A+  A+++R++   ++P      +
Sbjct: 57  IQAAGHAA-----EGADCYVTLEPCSHFGRTPPCVDALITAKVKRVFVAMTDPNPVVSGS 111

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
           G      A      E++  I   +S ++   F +  R
Sbjct: 112 GITRLRQAG----VEVHTDILAAQSEKLNPGFCQRMR 144


>gi|148242060|ref|YP_001227217.1| putative cytosine deaminase [Synechococcus sp. RCC307]
 gi|147850370|emb|CAK27864.1| Putative cytosine deaminase [Synechococcus sp. RCC307]
          Length = 149

 Score =  111 bits (280), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 33/111 (29%), Positives = 44/111 (39%), Gaps = 6/111 (5%)

Query: 1   MKKG--NVFMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEIL 57
           M +      M  A  EA+       IP+GAV      ++++R  N+  +  D T+H E  
Sbjct: 1   MDRDLRQQLMDQARAEAELGWAEGGIPIGAVLATESGEVVARGHNQRVQNGDPTSHGETQ 60

Query: 58  AIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGG 108
            IR   R      L    L  TL PC MCA    L   RR+  G      G
Sbjct: 61  CIRNAGRRRDWHQL---TLVTTLSPCPMCAGTAVLLGFRRVLIGERRSFAG 108


>gi|154491828|ref|ZP_02031454.1| hypothetical protein PARMER_01449 [Parabacteroides merdae ATCC
           43184]
 gi|154088069|gb|EDN87114.1| hypothetical protein PARMER_01449 [Parabacteroides merdae ATCC
           43184]
          Length = 395

 Score =  111 bits (280), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 43/161 (26%), Positives = 66/161 (40%), Gaps = 24/161 (14%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57
           M     +M+  +E A+     N  P   VGAV V   KII    +R        AHAE+ 
Sbjct: 49  MVVEEKYMARCIELAR-GGEGNTAPNPMVGAVIVHKGKIIGEGFHRKCGE----AHAEVN 103

Query: 58  AIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIE 111
           A+     +  + +L +  +YV+LEPC        CA  I    I R+  G  +P      
Sbjct: 104 AV---ASVRDEALLRDSTIYVSLEPCSHYGKTPPCAELIIRKGIPRVVVGTLDPFPEVSG 160

Query: 112 NGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF--FK-ERR 149
            G +    A      E+  G+ E+ +R +   F  F+  +R
Sbjct: 161 RGVRMLREAG----IEVVTGVLEEEARALNPAFMTFQIRKR 197


>gi|317128514|ref|YP_004094796.1| riboflavin biosynthesis protein RibD [Bacillus cellulosilyticus DSM
           2522]
 gi|315473462|gb|ADU30065.1| riboflavin biosynthesis protein RibD [Bacillus cellulosilyticus DSM
           2522]
          Length = 362

 Score =  111 bits (280), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 39/150 (26%), Positives = 59/150 (39%), Gaps = 21/150 (14%)

Query: 4   GNVFMSCALEEAQ--NAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
            N +M  A+E A+           VGAV V NN+I+    +          HAE  AI M
Sbjct: 2   DNKYMKMAIELAKVTEGHTTPNPVVGAVIVNNNQIVGFGAHLKAGEH----HAEKHAIEM 57

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
                         +YVTLEPC        CA A+  A I+++  G+ +P       G +
Sbjct: 58  AKDKT-----EGATIYVTLEPCSHYGRTPPCADAVIEAGIKKVIIGSVDPNPKVSGRGIK 112

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
               A      E+  G  ++ + ++   FF
Sbjct: 113 KLEDAG----IEVEVGCMKEETDKLNDVFF 138


>gi|294101991|ref|YP_003553849.1| riboflavin biosynthesis protein RibD [Aminobacterium colombiense
           DSM 12261]
 gi|293616971|gb|ADE57125.1| riboflavin biosynthesis protein RibD [Aminobacterium colombiense
           DSM 12261]
          Length = 369

 Score =  111 bits (280), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 30/156 (19%), Positives = 59/156 (37%), Gaps = 21/156 (13%)

Query: 2   KKGNVFMSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
           +    +M  A+  A+    +    P VG V V  + I++   +R+  +     HAE+ A+
Sbjct: 7   RDDEYYMRRAISLARRGTGQTSPNPLVGCVIVKEDTIVAEGYHRSYGM----PHAEVEAL 62

Query: 60  RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113
           +        +      +YV LEPC        CA  ++ +++ R+  G  +P       G
Sbjct: 63  QRAG-----DGAKGATVYVNLEPCAHFGKTPPCAPQLARSKVSRVVIGMVDPNAVVNGKG 117

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +               G+ E   + + + F +  R
Sbjct: 118 VEILRSNQL----ITETGVLEDECKWVNRGFIRRVR 149


>gi|300713101|ref|YP_003738913.1| Cytidine/deoxycytidylate deaminase, zinc-binding region (TBD)
           [Halalkalicoccus jeotgali B3]
 gi|299126785|gb|ADJ17122.1| Cytidine/deoxycytidylate deaminase, zinc-binding region (TBD)
           [Halalkalicoccus jeotgali B3]
          Length = 191

 Score =  111 bits (280), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 35/144 (24%), Positives = 58/144 (40%), Gaps = 3/144 (2%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
             +  M    E AQ A  R + P G+V V ++ II    NR     D+  H E+      
Sbjct: 47  NHDEHMRETFELAQEATARGDKPFGSVLVRDDTIIMSDSNREITEDDIRRHPELHLAYRA 106

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQ--FYTLA 120
           CR    +    + +Y +  PC MCA+ ++ A   R+ Y   +  G  +  G +    +  
Sbjct: 107 CREYDADERAAMVMYTSTGPCPMCASGMATAGFGRVVYSVGSD-GIAVFTGIEPTVRSAE 165

Query: 121 TCHHSPEIYPGISEQRSRQIIQDF 144
                 E+   +     R+I Q+F
Sbjct: 166 ILDGISEVVGPVLNDEGRRIHQEF 189


>gi|293390135|ref|ZP_06634469.1| riboflavin biosynthesis protein RibD [Aggregatibacter
           actinomycetemcomitans D7S-1]
 gi|290950669|gb|EFE00788.1| riboflavin biosynthesis protein RibD [Aggregatibacter
           actinomycetemcomitans D7S-1]
          Length = 374

 Score =  111 bits (280), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 40/159 (25%), Positives = 63/159 (39%), Gaps = 29/159 (18%)

Query: 3   KGNVFMSCALEEAQNAALRNE---IP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56
           +   FM  AL+ A+    + E    P   VG V V N KI+ +  +          HAE+
Sbjct: 8   QDVAFMQLALDLAK----QGEFTTTPNPSVGCVLVKNGKIVGKGFHFKAGE----PHAEV 59

Query: 57  LAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGI 110
           +A+R        E       YVTLEPC        CA  ++ A + ++     +P     
Sbjct: 60  MALREAG-----ENARGATAYVTLEPCFHFGRTPPCAKGLAEAGVSKVIAAMYDPNPQVA 114

Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             G Q    A    +     G+ E+++ Q+ + F K  R
Sbjct: 115 GKGLQILADAGIQSAV----GLLEEKAEQLNKGFLKRMR 149


>gi|89097868|ref|ZP_01170755.1| riboflavin specific deaminase [Bacillus sp. NRRL B-14911]
 gi|89087370|gb|EAR66484.1| riboflavin specific deaminase [Bacillus sp. NRRL B-14911]
          Length = 371

 Score =  111 bits (280), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 43/155 (27%), Positives = 62/155 (40%), Gaps = 21/155 (13%)

Query: 3   KGNVFMSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
               +M  AL  A+    +    P VGAV V + +I     +    LK  T HAE+ AIR
Sbjct: 2   TDEDYMDLALSLARKTIGQTSPNPCVGAVVVKDGQIAGMGAH----LKAGTQHAEVHAIR 57

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           M        +    ++YVTLEPC        CA  I  + I+R+   + +P       G 
Sbjct: 58  MA-----DGLARGAEIYVTLEPCSHHGKTPPCADLIIESGIKRVVIASIDPNPIVAGRGI 112

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
                A      E+  GI  + + +I   FF   R
Sbjct: 113 AKLEAAG----IEVEVGIRREEAEEINSAFFHFMR 143


>gi|325268454|ref|ZP_08135084.1| riboflavin biosynthesis protein RibD [Prevotella multiformis DSM
           16608]
 gi|324988982|gb|EGC20935.1| riboflavin biosynthesis protein RibD [Prevotella multiformis DSM
           16608]
          Length = 380

 Score =  111 bits (280), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 35/152 (23%), Positives = 61/152 (40%), Gaps = 18/152 (11%)

Query: 2   KKGNVFMSCALEEAQNA--ALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILA 58
           +   ++M   L+ A+N     +    VGAV V  + +II    +          HAE+ A
Sbjct: 5   ETDEIYMRRCLQLARNGQQLAKPNPMVGAVIVSKDGRIIGEGYHVRCGEG----HAEVNA 60

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
                +   + +L E  +YV+LEPC        CA  I    +RR+  G  +P       
Sbjct: 61  F-ASVKKEEEALLHEATVYVSLEPCSHYGKTPPCADLIISKGVRRVVCGCIDPFSKVQGR 119

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
           G +    A      ++  G+ E+   ++ + F
Sbjct: 120 GVKRLREAG----IDVTVGVLEKECLELNKRF 147


>gi|311745056|ref|ZP_07718841.1| riboflavin biosynthesis protein RibD [Algoriphagus sp. PR1]
 gi|311302325|gb|EAZ81787.2| riboflavin biosynthesis protein RibD [Algoriphagus sp. PR1]
          Length = 340

 Score =  111 bits (280), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 39/156 (25%), Positives = 66/156 (42%), Gaps = 26/156 (16%)

Query: 7   FMSCALEEAQNAALRNEI---PV-GAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
           +M  ALE A+    R ++   PV G V V  +KII    ++        AHAE+ A+   
Sbjct: 6   YMRRALELAELG--RGKVSPNPVVGCVIVKEDKIIGEGYHQKYGE----AHAEVNAVNS- 58

Query: 63  CRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116
             +  Q  +    +YVTLEPC        CA  +   ++ ++   A +        G Q 
Sbjct: 59  --VEDQTDIVGSTVYVTLEPCAHFGKTPPCANLLVDKKVGKVVIAAFDSNPLVGGKGIQI 116

Query: 117 YTLATCHHSPEIYPGISEQRSRQIIQDFF---KERR 149
              A      E+  G+ ++ +R   + FF   +++R
Sbjct: 117 LEEAG----IEVETGLLQEEARWQNRRFFTQIEKKR 148


>gi|303258272|ref|ZP_07344279.1| riboflavin biosynthesis protein RibD [Burkholderiales bacterium
           1_1_47]
 gi|302859025|gb|EFL82109.1| riboflavin biosynthesis protein RibD [Burkholderiales bacterium
           1_1_47]
          Length = 363

 Score =  111 bits (280), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 39/155 (25%), Positives = 63/155 (40%), Gaps = 18/155 (11%)

Query: 3   KGNVFMSCALEEAQNAALR--NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
               +M  ALE A+ A         VG V V + +II     +        AHAE++A+R
Sbjct: 4   SDCSYMRRALELAKKARFNCPPNPAVGCVIVKDRRIIGEGFTQKTGE----AHAEVMALR 59

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
                   E +    +YVTLEPC        CA A+  A++ R+     +P       G 
Sbjct: 60  DAASR--GESVEGATVYVTLEPCSHYGRTPPCALALKNAKVARVVAALKDPNPLVAGKGL 117

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
           +    A      ++  G+  + + +I + F K +R
Sbjct: 118 KMLEEAG----VKVECGLEAEEAEEINRGFLKRQR 148


>gi|312887826|ref|ZP_07747413.1| riboflavin biosynthesis protein RibD [Mucilaginibacter paludis DSM
           18603]
 gi|311299645|gb|EFQ76727.1| riboflavin biosynthesis protein RibD [Mucilaginibacter paludis DSM
           18603]
          Length = 343

 Score =  111 bits (280), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 37/150 (24%), Positives = 58/150 (38%), Gaps = 22/150 (14%)

Query: 8   MSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
           M   LE A+       +   P VGAV V   +II    ++        AHAE+ A+    
Sbjct: 1   MLRCLELAKLGL--GSVSPNPMVGAVIVHQGRIIGEGYHQRYGE----AHAEVNAVNNVI 54

Query: 64  RILSQ--EILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
                  ++L E  +YV+LEPC        CA  I   +I  +  G  +P       G +
Sbjct: 55  NRFDDAAQLLSESVIYVSLEPCAHYGKTPPCADLIIKHQIPEVVVGCRDPFDQVNGKGIE 114

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
               A      ++  G+ E+    + + FF
Sbjct: 115 KLQAAG----VKVTVGVLEKECLDLNKRFF 140


>gi|49484015|ref|YP_041239.1| bifunctional riboflavin biosynthesis protein [Staphylococcus aureus
           subsp. aureus MRSA252]
 gi|257425881|ref|ZP_05602305.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp.
           aureus 55/2053]
 gi|257428548|ref|ZP_05604946.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp.
           aureus 65-1322]
 gi|257431182|ref|ZP_05607559.1| bifunctional riboflavin biosynthesis protein [Staphylococcus aureus
           subsp. aureus 68-397]
 gi|257433863|ref|ZP_05610221.1| bifunctional riboflavin biosynthesis protein [Staphylococcus aureus
           subsp. aureus E1410]
 gi|257436780|ref|ZP_05612824.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp.
           aureus M876]
 gi|282904343|ref|ZP_06312231.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp.
           aureus C160]
 gi|282906168|ref|ZP_06314023.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp.
           aureus Btn1260]
 gi|282909085|ref|ZP_06316903.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp.
           aureus WW2703/97]
 gi|282911393|ref|ZP_06319195.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp.
           aureus WBG10049]
 gi|282914562|ref|ZP_06322348.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp.
           aureus M899]
 gi|282919530|ref|ZP_06327265.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp.
           aureus C427]
 gi|282924908|ref|ZP_06332574.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp.
           aureus C101]
 gi|283958523|ref|ZP_06375974.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp.
           aureus A017934/97]
 gi|293503640|ref|ZP_06667487.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp.
           aureus 58-424]
 gi|293510656|ref|ZP_06669361.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp.
           aureus M809]
 gi|293537197|ref|ZP_06671877.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp.
           aureus M1015]
 gi|295428344|ref|ZP_06820973.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp.
           aureus EMRSA16]
 gi|297590692|ref|ZP_06949330.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp.
           aureus MN8]
 gi|49242144|emb|CAG40844.1| bifunctional riboflavin biosynthesis protein [Staphylococcus aureus
           subsp. aureus MRSA252]
 gi|257271575|gb|EEV03721.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp.
           aureus 55/2053]
 gi|257275389|gb|EEV06876.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp.
           aureus 65-1322]
 gi|257278130|gb|EEV08778.1| bifunctional riboflavin biosynthesis protein [Staphylococcus aureus
           subsp. aureus 68-397]
 gi|257281956|gb|EEV12093.1| bifunctional riboflavin biosynthesis protein [Staphylococcus aureus
           subsp. aureus E1410]
 gi|257284131|gb|EEV14254.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp.
           aureus M876]
 gi|282313274|gb|EFB43670.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp.
           aureus C101]
 gi|282317340|gb|EFB47714.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp.
           aureus C427]
 gi|282321743|gb|EFB52068.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp.
           aureus M899]
 gi|282325088|gb|EFB55398.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp.
           aureus WBG10049]
 gi|282327349|gb|EFB57644.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp.
           aureus WW2703/97]
 gi|282331460|gb|EFB60974.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp.
           aureus Btn1260]
 gi|282595961|gb|EFC00925.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp.
           aureus C160]
 gi|283790672|gb|EFC29489.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp.
           aureus A017934/97]
 gi|290920042|gb|EFD97110.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp.
           aureus M1015]
 gi|291095306|gb|EFE25571.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp.
           aureus 58-424]
 gi|291466547|gb|EFF09068.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp.
           aureus M809]
 gi|295127744|gb|EFG57381.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp.
           aureus EMRSA16]
 gi|297575578|gb|EFH94294.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp.
           aureus MN8]
 gi|312437774|gb|ADQ76845.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp.
           aureus TCH60]
 gi|315195682|gb|EFU26069.1| bifunctional riboflavin biosynthesis protein [Staphylococcus aureus
           subsp. aureus CGS00]
          Length = 347

 Score =  111 bits (280), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 39/153 (25%), Positives = 65/153 (42%), Gaps = 26/153 (16%)

Query: 5   NVFMSCALEEAQNAALRNEI--PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
           + FM  A++ A     +  +  PVGAV V   +I+    +  +  K    HAE+ A+ M 
Sbjct: 2   SQFMDYAIQLANMVQGQTGVNPPVGAVVVKEGRIVGIGAHLRKGDK----HAEVQALDMA 57

Query: 63  CRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116
                Q+      +Y+TLEPC        C   I   +I ++ Y   +       N    
Sbjct: 58  -----QQNAEGATIYITLEPCSHFGSTPPCVNKIIDCKIAKVVYATKD-------NSLDT 105

Query: 117 YTLATC-HHSPEIYPGISEQRSRQIIQDFFKER 148
           +   T   H  E+   + ++R+ Q+ QDFFK +
Sbjct: 106 HGDETIRDHGIEVEC-VDDERASQLYQDFFKAK 137


>gi|168187451|ref|ZP_02622086.1| riboflavin biosynthesis protein RibD [Clostridium botulinum C str.
           Eklund]
 gi|169294672|gb|EDS76805.1| riboflavin biosynthesis protein RibD [Clostridium botulinum C str.
           Eklund]
          Length = 372

 Score =  111 bits (280), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 40/150 (26%), Positives = 61/150 (40%), Gaps = 23/150 (15%)

Query: 6   VFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
            FM  A+E ++  A     P   VGAV V +NKII +  +          HAE+ A++  
Sbjct: 4   KFMKKAIELSKLGAGYT-YPNPLVGAVIVKDNKIIGQGYHERFGGL----HAEVNALKNA 58

Query: 63  CRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116
                 E +    +YVTLEPC        CA  I  + I+ +  G  +P       G   
Sbjct: 59  -----TEDVTGATMYVTLEPCSHYGKTPPCANTIVKSGIKEVIVGMRDPNELVAGRGINI 113

Query: 117 YTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
                     ++  GI E+  ++I + F K
Sbjct: 114 LKENG----IKVTVGIFEEEIKKINEIFIK 139


>gi|167038695|ref|YP_001661680.1| riboflavin biosynthesis protein RibD [Thermoanaerobacter sp. X514]
 gi|300913745|ref|ZP_07131062.1| riboflavin biosynthesis protein RibD [Thermoanaerobacter sp. X561]
 gi|307723238|ref|YP_003902989.1| riboflavin biosynthesis protein RibD [Thermoanaerobacter sp. X513]
 gi|166852935|gb|ABY91344.1| riboflavin biosynthesis protein RibD [Thermoanaerobacter sp. X514]
 gi|300890430|gb|EFK85575.1| riboflavin biosynthesis protein RibD [Thermoanaerobacter sp. X561]
 gi|307580299|gb|ADN53698.1| riboflavin biosynthesis protein RibD [Thermoanaerobacter sp. X513]
          Length = 360

 Score =  111 bits (280), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 40/148 (27%), Positives = 62/148 (41%), Gaps = 21/148 (14%)

Query: 5   NVFMSCALEEAQNAAL-RNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
             +M  AL  A+      N  P VGAV V N KII    +          HAE+ A++  
Sbjct: 2   EEYMKRALTLAKKGWGYTNPNPLVGAVIVKNGKIIGEGYHEYFGG----PHAEVNALKNA 57

Query: 63  CRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116
                 E +    ++VTLEPC        C   I  + I+R+Y    +P      NG + 
Sbjct: 58  V-----ENVEGSTMFVTLEPCSHYGKTPPCVEEIIKSGIKRVYIAMEDPNPKVSGNGIKR 112

Query: 117 YTLATCHHSPEIYPGISEQRSRQIIQDF 144
              A      E++ G+ E+ +R++ + F
Sbjct: 113 LKEAG----IEVHVGMMEKEARKLNEIF 136


>gi|289755883|ref|ZP_06515261.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis
           EAS054]
 gi|289696470|gb|EFD63899.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis
           EAS054]
          Length = 111

 Score =  111 bits (280), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 28/78 (35%), Positives = 41/78 (52%)

Query: 72  PEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPG 131
               L VT+EPCTMCA A+ LAR+ RL +GA  PK G + +          +H PE+  G
Sbjct: 32  RGTTLAVTVEPCTMCAGALVLARVARLVFGAWEPKTGAVGSLWDVVRDRRLNHRPEVRGG 91

Query: 132 ISEQRSRQIIQDFFKERR 149
           +  +     ++ FF  +R
Sbjct: 92  VLARECAAPLEAFFARQR 109


>gi|271966223|ref|YP_003340419.1| cytidine/deoxycytidylate deaminase [Streptosporangium roseum DSM
           43021]
 gi|270509398|gb|ACZ87676.1| cytidine/deoxycytidylate deaminase [Streptosporangium roseum DSM
           43021]
          Length = 167

 Score =  111 bits (280), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 28/94 (29%), Positives = 43/94 (45%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           F    ++ A+        P   V V + +I++ + N+  +  D TAHAEILAIR  C  L
Sbjct: 3   FAQRTVDIARRNVTEGGRPFATVIVKDGEILAESANKVAQTSDPTAHAEILAIREACMRL 62

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
             E L    +YV   PC MC  ++       + +
Sbjct: 63  GTEHLTGTTIYVLAHPCPMCLGSLYYCSPDEVVF 96


>gi|328676184|gb|AEB27054.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase /
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Francisella cf. novicida Fx1]
          Length = 355

 Score =  111 bits (280), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 36/154 (23%), Positives = 56/154 (36%), Gaps = 22/154 (14%)

Query: 1   MKK-GNVFMSCALEEAQNAALR--NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57
           MK     +M  AL  A    L       VG + V N  IIS   +         AHAE+ 
Sbjct: 1   MKNIDKYYMQQALTLANRGRLTVSPNPMVGCIIVKNGAIISEGWHETVGE----AHAEVH 56

Query: 58  AIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIE 111
           A+                 YVTLEPC        C   I  A I+++     +P      
Sbjct: 57  ALTKAVDKA-----KGATAYVTLEPCCHHGRTPPCTDTIIKAGIKKVIIATLDPNPKVAG 111

Query: 112 NGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
            G +       +    +  G+ E++++++ + FF
Sbjct: 112 KGVERLK----NAGITVEVGLLEKQAQELNKIFF 141


>gi|187930956|ref|YP_001890940.1| riboflavin biosynthesis protein RibD [Francisella tularensis subsp.
           mediasiatica FSC147]
 gi|187711865|gb|ACD30162.1| riboflavin biosynthesis protein RibD [Francisella tularensis subsp.
           mediasiatica FSC147]
          Length = 355

 Score =  111 bits (280), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 36/154 (23%), Positives = 56/154 (36%), Gaps = 22/154 (14%)

Query: 1   MKK-GNVFMSCALEEAQNAALR--NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57
           MK     +M  AL  A    L       VG + V N  IIS   +         AHAE+ 
Sbjct: 1   MKNIDKYYMQQALTLANRGRLTVSPNPMVGCIIVKNGAIISEGWHETVGE----AHAEVH 56

Query: 58  AIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIE 111
           A+                 YVTLEPC        C   I  A I+++     +P      
Sbjct: 57  ALTKAVDKA-----KGATAYVTLEPCCHCGRTPPCTDTIIKAGIKKVIIATLDPNPKVAG 111

Query: 112 NGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
            G +       +    +  G+ E++++++ + FF
Sbjct: 112 KGVERLK----NAGITVEVGLLEKQAQELNKIFF 141


>gi|254375242|ref|ZP_04990722.1| hypothetical protein FTDG_01434 [Francisella novicida GA99-3548]
 gi|151572960|gb|EDN38614.1| hypothetical protein FTDG_01434 [Francisella novicida GA99-3548]
          Length = 355

 Score =  111 bits (280), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 36/154 (23%), Positives = 56/154 (36%), Gaps = 22/154 (14%)

Query: 1   MKK-GNVFMSCALEEAQNAALR--NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57
           MK     +M  AL  A    L       VG + V N  IIS   +         AHAE+ 
Sbjct: 1   MKNIDKYYMQQALTLANRGRLTVSPNPMVGCIIVKNGAIISEGWHETVGE----AHAEVH 56

Query: 58  AIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIE 111
           A+                 YVTLEPC        C   I  A I+++     +P      
Sbjct: 57  ALTKAVDKA-----KGATAYVTLEPCCHHGRTPPCTDTIIKAGIKKVIIATLDPNPKVAG 111

Query: 112 NGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
            G +       +    +  G+ E++++++ + FF
Sbjct: 112 KGVERLK----NAGITVEVGLLEKQAQELNKIFF 141


>gi|62260407|gb|AAX77904.1| unknown protein [synthetic construct]
          Length = 390

 Score =  111 bits (280), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 36/154 (23%), Positives = 56/154 (36%), Gaps = 22/154 (14%)

Query: 1   MKK-GNVFMSCALEEAQNAALR--NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57
           MK     +M  AL  A    L       VG + V N  IIS   +         AHAE+ 
Sbjct: 27  MKNIDKYYMQQALTLANRGRLTVSPNPMVGCIIVKNGAIISEGWHETVGE----AHAEVH 82

Query: 58  AIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIE 111
           A+                 YVTLEPC        C   I  A I+++     +P      
Sbjct: 83  ALTKAVDKA-----KGATAYVTLEPCCHCGRTPPCTDTIIKAGIKKVIIATLDPNPKVAG 137

Query: 112 NGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
            G +       +    +  G+ E++++++ + FF
Sbjct: 138 KGVERLK----NAGITVEVGLLEKQAQELNKIFF 167


>gi|89255521|ref|YP_512882.1| riboflavin biosynthesis protein ribD [Francisella tularensis subsp.
           holarctica LVS]
 gi|115314040|ref|YP_762763.1| bifunctional 5-amino-6-(5-phosphoribosylamino)uracil reductase/
           diaminohydroxyphosphoribosylaminopyrimidine deaminase
           [Francisella tularensis subsp. holarctica OSU18]
 gi|156501455|ref|YP_001427520.1| riboflavin biosynthesis protein [Francisella tularensis subsp.
           holarctica FTNF002-00]
 gi|167010294|ref|ZP_02275225.1| riboflavin biosynthesis protein RibD [Francisella tularensis subsp.
           holarctica FSC200]
 gi|254366949|ref|ZP_04982986.1| riboflavin biosynthesis protein ribD [Francisella tularensis subsp.
           holarctica 257]
 gi|254368485|ref|ZP_04984502.1| hypothetical protein FTAG_01328 [Francisella tularensis subsp.
           holarctica FSC022]
 gi|290954250|ref|ZP_06558871.1| riboflavin biosynthesis protein [Francisella tularensis subsp.
           holarctica URFT1]
 gi|295312314|ref|ZP_06803101.1| riboflavin biosynthesis protein [Francisella tularensis subsp.
           holarctica URFT1]
 gi|89143352|emb|CAJ78519.1| riboflavin biosynthesis protein ribD [Francisella tularensis subsp.
           holarctica LVS]
 gi|115128939|gb|ABI82126.1| bifunctional 5-amino-6-(5-phosphoribosylamino)uracil reductase/
           diaminohydroxyphosphoribosylaminopyrimidine deaminase
           [Francisella tularensis subsp. holarctica OSU18]
 gi|134252776|gb|EBA51870.1| riboflavin biosynthesis protein ribD [Francisella tularensis subsp.
           holarctica 257]
 gi|156252058|gb|ABU60564.1| riboflavin biosynthesis protein [Francisella tularensis subsp.
           holarctica FTNF002-00]
 gi|157121379|gb|EDO65580.1| hypothetical protein FTAG_01328 [Francisella tularensis subsp.
           holarctica FSC022]
          Length = 355

 Score =  111 bits (280), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 36/154 (23%), Positives = 56/154 (36%), Gaps = 22/154 (14%)

Query: 1   MKK-GNVFMSCALEEAQNAALR--NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57
           MK     +M  AL  A    L       VG + V N  IIS   +         AHAE+ 
Sbjct: 1   MKNIDKYYMQQALTLANRGRLTVSPNPMVGCIIVKNGAIISEGWHETVGE----AHAEVH 56

Query: 58  AIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIE 111
           A+                 YVTLEPC        C   I  A I+++     +P      
Sbjct: 57  ALTKAVDKA-----KGATAYVTLEPCCHCGRTPPCTDTIIKAGIKKVIIATLDPNPKVAG 111

Query: 112 NGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
            G +       +    +  G+ E++++++ + FF
Sbjct: 112 KGVERLK----NAGITVEVGLLEKQAQELNKIFF 141


>gi|56708681|ref|YP_170577.1| riboflavin biosynthesis protein ribD [Francisella tularensis subsp.
           tularensis SCHU S4]
 gi|110671153|ref|YP_667710.1| riboflavin biosynthesis protein ribD [Francisella tularensis subsp.
           tularensis FSC198]
 gi|134302741|ref|YP_001122709.1| riboflavin biosynthesis protein RibD [Francisella tularensis subsp.
           tularensis WY96-3418]
 gi|224457890|ref|ZP_03666363.1| riboflavin biosynthesis protein RibD [Francisella tularensis subsp.
           tularensis MA00-2987]
 gi|254371312|ref|ZP_04987314.1| hypothetical protein [Francisella tularensis subsp. tularensis
           FSC033]
 gi|254875556|ref|ZP_05248266.1| riboflavin biosynthesis protein ribD [Francisella tularensis subsp.
           tularensis MA00-2987]
 gi|56605173|emb|CAG46304.1| riboflavin biosynthesis protein ribD [Francisella tularensis subsp.
           tularensis SCHU S4]
 gi|110321486|emb|CAL09687.1| riboflavin biosynthesis protein ribD [Francisella tularensis subsp.
           tularensis FSC198]
 gi|134050518|gb|ABO47589.1| Riboflavin biosynthesis protein RibD [Francisella tularensis subsp.
           tularensis WY96-3418]
 gi|151569552|gb|EDN35206.1| hypothetical protein FTBG_01094 [Francisella tularensis subsp.
           tularensis FSC033]
 gi|254841555|gb|EET19991.1| riboflavin biosynthesis protein ribD [Francisella tularensis subsp.
           tularensis MA00-2987]
 gi|282159932|gb|ADA79323.1| Riboflavin biosynthesis protein RibD [Francisella tularensis subsp.
           tularensis NE061598]
          Length = 355

 Score =  111 bits (280), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 36/154 (23%), Positives = 56/154 (36%), Gaps = 22/154 (14%)

Query: 1   MKK-GNVFMSCALEEAQNAALR--NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57
           MK     +M  AL  A    L       VG + V N  IIS   +         AHAE+ 
Sbjct: 1   MKNIDKYYMQQALTLANRGRLTVSPNPMVGCIIVKNGAIISEGWHETVGE----AHAEVH 56

Query: 58  AIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIE 111
           A+                 YVTLEPC        C   I  A I+++     +P      
Sbjct: 57  ALTKAVDKA-----KGATAYVTLEPCCHCGRTPPCTDTIIKAGIKKVIIATLDPNPKVAG 111

Query: 112 NGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
            G +       +    +  G+ E++++++ + FF
Sbjct: 112 KGVERLK----NAGITVEVGLLEKQAQELNKIFF 141


>gi|332291081|ref|YP_004429690.1| riboflavin biosynthesis protein RibD [Krokinobacter diaphorus
           4H-3-7-5]
 gi|332169167|gb|AEE18422.1| riboflavin biosynthesis protein RibD [Krokinobacter diaphorus
           4H-3-7-5]
          Length = 333

 Score =  111 bits (280), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 40/160 (25%), Positives = 70/160 (43%), Gaps = 20/160 (12%)

Query: 1   MKKGNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           MK  N +++  +  A+N          VGAV V NNKII+              HAE+  
Sbjct: 1   MKIHNTYINRCIALAKNGLPVAMPNPSVGAVLVHNNKIIAEGY----TSDYGGPHAEVNC 56

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
           I    +  + E++ +  LYV+LEPC        CA  +  + I+++  G  +P       
Sbjct: 57  I-AFAKANTPELIAKSTLYVSLEPCSHWGKTPPCADLVVASGIKKVVIGTIDPFAKVAGA 115

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF---KERR 149
           G +    A      ++  G+ E+  ++I + FF   +++R
Sbjct: 116 GIKRLIQAG----VDVTVGVQEKECQEINKRFFTYHEKKR 151


>gi|308185884|ref|YP_003930015.1| bifunctional pyrimidine deaminase/reductase in pathway of
           riboflavin synthesis [Pantoea vagans C9-1]
 gi|308056394|gb|ADO08566.1| bifunctional pyrimidine deaminase/reductase in pathway of
           riboflavin synthesis [Pantoea vagans C9-1]
          Length = 366

 Score =  111 bits (280), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 34/155 (21%), Positives = 56/155 (36%), Gaps = 23/155 (14%)

Query: 4   GNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
              +M+ ALE A+       +P   VG V V + +++    ++         HAE+ A+R
Sbjct: 2   DERYMARALELARRGRFTT-MPNPNVGCVIVRDGEVVGEGWHQRAGE----PHAEVHALR 56

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           M               YVTLEPC        C  A+  A + R+     +P       G 
Sbjct: 57  MAGEKA-----RGATAYVTLEPCSHHGRTPPCCDALIAAGVIRVVAAMQDPNPQVAGRGL 111

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
                A      ++  G+    +  + + F K  R
Sbjct: 112 HRLHQAG----IDVSHGLMMPEAEALNRGFLKRMR 142


>gi|313891665|ref|ZP_07825272.1| riboflavin biosynthesis protein RibD [Dialister microaerophilus
           UPII 345-E]
 gi|313119943|gb|EFR43128.1| riboflavin biosynthesis protein RibD [Dialister microaerophilus
           UPII 345-E]
          Length = 378

 Score =  111 bits (280), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 35/154 (22%), Positives = 61/154 (39%), Gaps = 21/154 (13%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           + +   +MS AL+ A++     E  P VGAV V N K+I    ++         HAE+ A
Sbjct: 3   INEDEKWMSHALDLAKHGYWYTETNPLVGAVLVKNGKVIGEGWHKKYGD----VHAEVNA 58

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
            +       +E      LYVTLEPC        C   +   +++R+     +P       
Sbjct: 59  FKN-----CKENTEHATLYVTLEPCCHYGKTPPCLNLVLQKKVKRVVIAMKDPNPLVSGK 113

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
             +           ++  G+ E  + ++ + F K
Sbjct: 114 SIKILKENG----IQVIVGVLENEAVKLNEIFIK 143


>gi|228472970|ref|ZP_04057727.1| riboflavin biosynthesis protein RibD [Capnocytophaga gingivalis
           ATCC 33624]
 gi|228275552|gb|EEK14329.1| riboflavin biosynthesis protein RibD [Capnocytophaga gingivalis
           ATCC 33624]
          Length = 347

 Score =  111 bits (280), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 39/154 (25%), Positives = 53/154 (34%), Gaps = 21/154 (13%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57
           M     +M   L  A  A      P   VG+V V   KII    +          HAE+ 
Sbjct: 1   MTIDQRYMQRCLSLAGKALGYT-YPNPLVGSVIVHQGKIIGEGWHTKAGE----PHAEVN 55

Query: 58  AIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIE 111
           AI     +    +L E  LYV LEPC        CA  I    I ++  G  +       
Sbjct: 56  AI---ASVKDSSLLKESVLYVNLEPCAHFGKTPPCADLIIEKEIPKVVIGCMDIFSKVAG 112

Query: 112 NGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
            G +    A      E+  G+ E   + +   FF
Sbjct: 113 KGIERLQKAGR----EVVVGVLENECQALNTRFF 142


>gi|315646375|ref|ZP_07899493.1| riboflavin biosynthesis protein RibD [Paenibacillus vortex V453]
 gi|315278018|gb|EFU41338.1| riboflavin biosynthesis protein RibD [Paenibacillus vortex V453]
          Length = 366

 Score =  111 bits (279), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 40/152 (26%), Positives = 60/152 (39%), Gaps = 21/152 (13%)

Query: 3   KGNVFMSCALEEAQNAALRNEI-PV-GAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
               +MS AL+ A+ A  +  I PV G V V N  +     +  R     T HAEI A+ 
Sbjct: 5   NDEFYMSLALDLAERAQGQTGINPVVGCVIVKNGALAGVGTHLER----GTPHAEIHALN 60

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           M              +YVTLEPC        C+  +    ++R+     +P       G 
Sbjct: 61  MAGTKA-----AGSTVYVTLEPCSHYGATPPCSERLIAEGVKRVVVACEDPNPLVAGKGI 115

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
           Q    A      E+  GI  +R+ ++ + F K
Sbjct: 116 QMLRAAG----IEVVTGILRERALRLNEAFIK 143


>gi|307825581|ref|ZP_07655799.1| riboflavin biosynthesis protein RibD [Methylobacter tundripaludum
           SV96]
 gi|307733467|gb|EFO04326.1| riboflavin biosynthesis protein RibD [Methylobacter tundripaludum
           SV96]
          Length = 361

 Score =  111 bits (279), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 31/153 (20%), Positives = 59/153 (38%), Gaps = 22/153 (14%)

Query: 3   KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +   +M+ A+  A+      +  P VG V V + ++I +  +          HAE+ A++
Sbjct: 5   RDAFYMAQAISLAKKGRYTTDPNPRVGCVLVRDGEVIGQGWHVKAGQG----HAEVEALK 60

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
                           YVTLEPC        C  A+  A + R+     +P      +G 
Sbjct: 61  NV------PDAKGATAYVTLEPCSHQGRTPPCCDALIKAGVSRVVAAMQDPNPQVSGSGL 114

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
           +   +A      E+  G+ ++ +  + + F K 
Sbjct: 115 KKLKVAG----IEVICGVLQEDALALNRGFIKR 143


>gi|189220330|ref|YP_001940970.1| Cytosine/adenosine deaminase [Methylacidiphilum infernorum V4]
 gi|189187188|gb|ACD84373.1| Cytosine/adenosine deaminase [Methylacidiphilum infernorum V4]
          Length = 159

 Score =  111 bits (279), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 43/137 (31%), Positives = 59/137 (43%), Gaps = 12/137 (8%)

Query: 1   MKK--GNVFMSCALEEAQNAAL--RNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56
           MK+     F+      A++  L  R + P G V VL ++I+ +  NR   L D TAHAEI
Sbjct: 1   MKRSMDLRFLERTACLARDNVLSNRGD-PFGPVVVLEDQIVGQGANRVTVLCDPTAHAEI 59

Query: 57  LAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASN---PKGGGIENG 113
            A+R     L +  L    LY+ + P  MC  A   ARI+R+  G  N    K G     
Sbjct: 60  EAMRQAAIKLGRFDLRGCLLYMNINPYPMCLTAAYWARIKRIVCGGPNTLTEKAGFKGT- 118

Query: 114 TQFYTLATCHHSPEIYP 130
              Y      H  E+  
Sbjct: 119 ---YLWNEIRHPLEVRS 132


>gi|289522481|ref|ZP_06439335.1| putative cytosine deaminase [Anaerobaculum hydrogeniformans ATCC
           BAA-1850]
 gi|289504317|gb|EFD25481.1| putative cytosine deaminase [Anaerobaculum hydrogeniformans ATCC
           BAA-1850]
          Length = 165

 Score =  111 bits (279), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 28/103 (27%), Positives = 47/103 (45%), Gaps = 1/103 (0%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRM 61
               ++  A+E ++ A      P GAV V     ++   GN     K  T HAE++ +  
Sbjct: 9   DHIKYLRLAIETSRKARESGNTPFGAVLVGPEGDVLLEQGNVEITEKRCTGHAELVLVEK 68

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASN 104
             +I  ++ L +  LY ++EPC MC  AI  + +  + Y  S 
Sbjct: 69  ASQIYDKDFLWQCILYTSVEPCAMCTGAIYWSNVGTIIYALSE 111


>gi|297543534|ref|YP_003675836.1| riboflavin biosynthesis protein RibD [Thermoanaerobacter mathranii
           subsp. mathranii str. A3]
 gi|296841309|gb|ADH59825.1| riboflavin biosynthesis protein RibD [Thermoanaerobacter mathranii
           subsp. mathranii str. A3]
          Length = 360

 Score =  111 bits (279), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 40/148 (27%), Positives = 62/148 (41%), Gaps = 21/148 (14%)

Query: 5   NVFMSCALEEAQNAAL-RNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
             +M  AL  A+      N  P VGAV V N KII    +          HAE+ A++  
Sbjct: 2   EEYMKRALTLAKKGWGYTNPNPLVGAVIVKNGKIIGEGYHEYFGG----PHAEVNALKNA 57

Query: 63  CRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116
                 E +    ++VTLEPC        C   I  + I+R+Y    +P      NG + 
Sbjct: 58  V-----ENVEGSTMFVTLEPCSHYGKTPPCVEEIIKSGIKRVYIAMEDPNPKVSGNGIKR 112

Query: 117 YTLATCHHSPEIYPGISEQRSRQIIQDF 144
              A      E++ G+ E+ +R++ + F
Sbjct: 113 LKEAG----IEVHVGMMEKEARKLNEIF 136


>gi|218549926|ref|YP_002383717.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Escherichia fergusonii ATCC 35469]
 gi|218357467|emb|CAQ90106.1| fused diaminohydroxyphosphoribosylaminopyrimidine deaminase;
           5-amino-6-(5-phosphoribosylamino) uracil reductase
           [Escherichia fergusonii ATCC 35469]
          Length = 367

 Score =  111 bits (279), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 35/155 (22%), Positives = 56/155 (36%), Gaps = 21/155 (13%)

Query: 3   KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +   +M+ AL+ AQ      +  P VG V V + +I+    +          HAE+ A+R
Sbjct: 2   QDEYYMARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHHRAGE----PHAEVHALR 57

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           M               YVTLEPC        C  A+    + R+     +P       G 
Sbjct: 58  MAGEKA-----KGATAYVTLEPCSHHGRTPPCCDALIATGVARVVASMQDPNPQVAGRGL 112

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
                A      ++  G+    + Q+ + F K  R
Sbjct: 113 YRLQQAG----IDVSHGLMMSEAEQLNKGFLKRMR 143


>gi|50120065|ref|YP_049232.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Pectobacterium atrosepticum SCRI1043]
 gi|49610591|emb|CAG74036.1| riboflavin biosynthesis protein [Pectobacterium atrosepticum
           SCRI1043]
          Length = 369

 Score =  111 bits (279), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 38/157 (24%), Positives = 58/157 (36%), Gaps = 21/157 (13%)

Query: 1   MKKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           M +  ++M+ ALE A+         P VG V V + +I+    +          HAE+ A
Sbjct: 1   MPQDELYMARALELARRGRFTTAPNPNVGCVIVRDGEIVGEGYHFRAGE----PHAEVHA 56

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
           +RM       E       YVTLEPC        CA A+  A + R+     +P       
Sbjct: 57  LRMAG-----ERARGATAYVTLEPCSHHGRTPPCADALITAGVSRVVAAMQDPNPQVAGR 111

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
           G      A       +  G+    + ++   F K  R
Sbjct: 112 GLHRLQQAG----ITVSHGLMMAEAEKVNVGFLKRMR 144


>gi|167855405|ref|ZP_02478171.1| formyltetrahydrofolate deformylase [Haemophilus parasuis 29755]
 gi|167853471|gb|EDS24719.1| formyltetrahydrofolate deformylase [Haemophilus parasuis 29755]
          Length = 363

 Score =  111 bits (279), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 37/151 (24%), Positives = 58/151 (38%), Gaps = 21/151 (13%)

Query: 3   KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
             ++FM+ A+E A+      N  P VG V V +  I++   ++         HAE  AI 
Sbjct: 2   THSIFMARAIELAELGRGWTNPNPLVGCVIVKDGNIVAEGYHQRYGE----WHAERKAI- 56

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
               +  QE L     YVTLEPC        C+  +    I+ +  G+S+P       G 
Sbjct: 57  ----LHCQEDLSGATAYVTLEPCCHHGRTPPCSDLLIERGIKTVVIGSSDPNPLVAGKGV 112

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
                A      E+   + +     +   FF
Sbjct: 113 AQLRQAG----IEVIENVMKAECDALNPIFF 139


>gi|302387516|ref|YP_003823338.1| riboflavin biosynthesis protein RibD [Clostridium saccharolyticum
           WM1]
 gi|302198144|gb|ADL05715.1| riboflavin biosynthesis protein RibD [Clostridium saccharolyticum
           WM1]
          Length = 368

 Score =  111 bits (279), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 41/153 (26%), Positives = 59/153 (38%), Gaps = 22/153 (14%)

Query: 1   MKKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           M+    +M  A+  AQ    L N  P VGAV V   +II               HAE  A
Sbjct: 1   MEDME-YMGMAVRLAQKGCGLVNPNPMVGAVLVKEGRIIGEGYYERYGAL----HAERNA 55

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
           I     +  +E      LYVTLEPC        C  AI  + IRR+  G+ +P       
Sbjct: 56  I-----LNCRESPEGTTLYVTLEPCCHHGKTPPCTEAILQSGIRRVVIGSHDPNPLVKGK 110

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
           G +           E+   + ++   ++ + FF
Sbjct: 111 GIKQLREQG----IEVVEDVLKEECDKLNEVFF 139


>gi|288929017|ref|ZP_06422863.1| riboflavin biosynthesis protein RibD [Prevotella sp. oral taxon 317
           str. F0108]
 gi|288330001|gb|EFC68586.1| riboflavin biosynthesis protein RibD [Prevotella sp. oral taxon 317
           str. F0108]
          Length = 348

 Score =  111 bits (279), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 41/158 (25%), Positives = 62/158 (39%), Gaps = 22/158 (13%)

Query: 4   GNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
              +M   L+ A+   L    P   VGAV V N++II    +    +     HAE+ A  
Sbjct: 42  DERYMRRCLQLARCGLL-GAKPNPMVGAVIVYNDRIIGEGYH----IHCGEGHAEVNAF- 95

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
              R   +  LP   LYV+LEPC        CA  I    + R+  G  +P       G 
Sbjct: 96  AAIRPEDEPFLPHSTLYVSLEPCSHYGKTPPCADLIIRKGVPRVVVGCVDPFSKVQGRGI 155

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF---KERR 149
           +    A      E+  G+ E+    + + F    +E+R
Sbjct: 156 EKLRQAG----IEVVVGVLEKACLALNRRFIVFQREQR 189


>gi|169830807|ref|YP_001716789.1| riboflavin biosynthesis protein RibD [Candidatus Desulforudis
           audaxviator MP104C]
 gi|169637651|gb|ACA59157.1| riboflavin biosynthesis protein RibD [Candidatus Desulforudis
           audaxviator MP104C]
          Length = 372

 Score =  111 bits (279), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 38/151 (25%), Positives = 57/151 (37%), Gaps = 21/151 (13%)

Query: 4   GNVFMSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
              +M  AL+ A  A  R    P VGAV V + +I+ R  +    L     HAEI+A+  
Sbjct: 2   DQEYMRMALDLAVRARGRTSPNPLVGAVVVRDGEIVGRGYHARAGL----PHAEIVALAQ 57

Query: 62  GCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQ 115
                         LYV+LEPC        C  A+  A +RR+     +P       G  
Sbjct: 58  AGEAA-----RGSTLYVSLEPCCHFGRTGPCTEAVIAAGVRRVVTAMRDPNPKVAGRGIA 112

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
               A      E+   +    + ++ + F K
Sbjct: 113 RLREAG----VEVTEDVLRDEAARLNEIFIK 139


>gi|58699421|ref|ZP_00374173.1| riboflavin biosynthesis protein RibD [Wolbachia endosymbiont of
           Drosophila ananassae]
 gi|225630417|ref|YP_002727208.1| riboflavin biosynthesis protein RibD [Wolbachia sp. wRi]
 gi|58534061|gb|EAL58308.1| riboflavin biosynthesis protein RibD [Wolbachia endosymbiont of
           Drosophila ananassae]
 gi|225592398|gb|ACN95417.1| riboflavin biosynthesis protein RibD [Wolbachia sp. wRi]
          Length = 360

 Score =  111 bits (279), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 37/153 (24%), Positives = 59/153 (38%), Gaps = 25/153 (16%)

Query: 3   KGNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
             + FMS AL  A+       +   P VG V V +  I+S              HAE++A
Sbjct: 2   TDDHFMSIALRLAEKNL--GNVAPNPAVGCVIVKDGTIVSEGY----TGIGGRPHAEVVA 55

Query: 59  IRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIEN 112
           ++               +Y+TLEPC        C A I  A I+R+     +P       
Sbjct: 56  LQNAKDSTH-----GATIYITLEPCCHHGVTGPCTAKIIKASIKRVVIATIDPDSRVSGR 110

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
           G +    A      E+  GI ++ ++++   FF
Sbjct: 111 GMKALKEAG----IEVEQGIMQKEAKELNVGFF 139


>gi|290954851|ref|YP_003486033.1| nucleotide deaminase [Streptomyces scabiei 87.22]
 gi|260644377|emb|CBG67462.1| putative nucleotide deaminase [Streptomyces scabiei 87.22]
          Length = 182

 Score =  111 bits (279), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 35/129 (27%), Positives = 53/129 (41%), Gaps = 33/129 (25%)

Query: 8   MSCALEEAQNAALRN-EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M+ A+  A  +       P GAV + + +IISR  NR     D TAHAE+ AIR   + L
Sbjct: 1   MTEAVRLATESVNGGWGGPFGAVIIRDGEIISRGQNRVLLTGDPTAHAEVEAIRKAVQRL 60

Query: 67  SQE--------------------------------ILPEVDLYVTLEPCTMCAAAISLAR 94
           + E                                +L    +Y++  PC MC +AI  +R
Sbjct: 61  NPEAPSISEEHQNESTLAYVSRPEGSPDPVPERARMLMGCSIYISGAPCPMCMSAIYWSR 120

Query: 95  IRRLYYGAS 103
           I  +Y+ + 
Sbjct: 121 IDAVYFASD 129


>gi|220929424|ref|YP_002506333.1| riboflavin biosynthesis protein RibD [Clostridium cellulolyticum
           H10]
 gi|219999752|gb|ACL76353.1| riboflavin biosynthesis protein RibD [Clostridium cellulolyticum
           H10]
          Length = 367

 Score =  111 bits (278), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 40/152 (26%), Positives = 58/152 (38%), Gaps = 21/152 (13%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           M     +M   LE A+    R    P VGAV   N KIIS   +    L    AHAE+ A
Sbjct: 1   MNIHEFYMKRTLEIAKEGWGRTNPNPLVGAVIAKNGKIISEGFH--EALG--CAHAEVCA 56

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
                       +    LYV LEPC        C  AI  + I+ +     +P       
Sbjct: 57  FSNA-----PTDISGATLYVNLEPCSHYGRTPPCVKAIIDSGIKEVVVAMVDPNPKVSGK 111

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
           G Q    A  +    +  G+ E+ ++++ + F
Sbjct: 112 GIQMLKDANIN----VIVGVLEEEAKKLNEIF 139


>gi|114771641|ref|ZP_01449045.1| riboflavin biosynthesis protein RibD [alpha proteobacterium
           HTCC2255]
 gi|114547713|gb|EAU50603.1| riboflavin biosynthesis protein RibD [alpha proteobacterium
           HTCC2255]
          Length = 365

 Score =  111 bits (278), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 37/152 (24%), Positives = 56/152 (36%), Gaps = 21/152 (13%)

Query: 2   KKGNVFMSCALEE-AQNAALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
                +M  AL   A+ A      P VG V V N+ +I R        +    HAE +A+
Sbjct: 5   NTDERWMRLALSLGARGAGRTWPNPFVGCVIVKNSLVIGRGY----TQQGGRPHAETVAL 60

Query: 60  RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113
           +               +YVTLEPC        C   +  A I+R+   A +P       G
Sbjct: 61  QQASN-----DAENSTVYVTLEPCAHTGKTPPCVNNLIKAGIKRVVIAAIDPDHRVSGKG 115

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
            Q       +   E+  GI ++ + +    FF
Sbjct: 116 IQILK----NAGIEVSVGILKEEAEKAHAGFF 143


>gi|85090433|ref|XP_958414.1| cytosine deaminase [Neurospora crassa OR74A]
 gi|28919775|gb|EAA29178.1| cytosine deaminase [Neurospora crassa OR74A]
          Length = 159

 Score =  111 bits (278), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 33/142 (23%), Positives = 61/142 (42%), Gaps = 12/142 (8%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKII-SRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           ++ A +EA+ +  +  IP+GA  + +  I+  R  N+  +L     H E   +    R+ 
Sbjct: 7   LAIAFKEAKKSYEQGGIPIGAALISSTGIVLGRGHNQRVQLDSPIHHGETATLLNAGRLP 66

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
           +        +Y TL PC MC  AI L +IRR+  G ++        G  +          
Sbjct: 67  ASTY-ANSTMYTTLSPCDMCTGAILLYKIRRVVIGENSTFKAA---GEDYLRQRG----V 118

Query: 127 EIYPGISEQ-RSRQIIQDFFKE 147
           E+   + +    R +++ F +E
Sbjct: 119 EVV--VMDDQECRTLMERFVRE 138


>gi|189500554|ref|YP_001960024.1| riboflavin biosynthesis protein RibD [Chlorobium phaeobacteroides
           BS1]
 gi|189495995|gb|ACE04543.1| riboflavin biosynthesis protein RibD [Chlorobium phaeobacteroides
           BS1]
          Length = 371

 Score =  111 bits (278), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 43/155 (27%), Positives = 63/155 (40%), Gaps = 23/155 (14%)

Query: 2   KKGNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57
           ++   +MS  LE A   A    +   P VG++ VL+ +II    +          HAE+ 
Sbjct: 10  RQHERYMSRCLELAGKGA--GYVSPNPMVGSLLVLDGQIIGEGYHERYGG----PHAEVN 63

Query: 58  AIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIE 111
           AI     +   E L E  LYV LEPC        C+  I    I R+     +P      
Sbjct: 64  AI---ASVKDSEQLRESTLYVNLEPCSHHGKTPPCSDLIIQKNIPRVVVACRDPHRMVAG 120

Query: 112 NGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
            G Q    A      E+  G+ E+RS ++ + F K
Sbjct: 121 RGIQKLLDAG----VEVIEGVLEERSLKLNEAFMK 151


>gi|152998046|ref|YP_001342881.1| riboflavin biosynthesis protein RibD [Marinomonas sp. MWYL1]
 gi|150838970|gb|ABR72946.1| riboflavin biosynthesis protein RibD [Marinomonas sp. MWYL1]
          Length = 384

 Score =  111 bits (278), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 39/155 (25%), Positives = 57/155 (36%), Gaps = 21/155 (13%)

Query: 3   KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
               +M+ A++ A+      +  P VG V V + +II +  +          HAE+ A+ 
Sbjct: 5   NHEYWMAKAIQLAKKGRYTTHPNPRVGCVLVKDQQIIGQGFHVKAGEG----HAEVNALA 60

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
                  +        YVTLEPC        CA A+  A + R+ YG  +P      NG 
Sbjct: 61  DA-----KHDAVGATAYVTLEPCSHQGKTPPCADALIKAGVARVVYGMQDPNPEVSGNGL 115

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
                A      EI   I E     +   F K  R
Sbjct: 116 AKIKKAG----IEIIGPILESDCEALNPGFIKRMR 146


>gi|194336939|ref|YP_002018733.1| riboflavin biosynthesis protein RibD [Pelodictyon
           phaeoclathratiforme BU-1]
 gi|194309416|gb|ACF44116.1| riboflavin biosynthesis protein RibD [Pelodictyon
           phaeoclathratiforme BU-1]
          Length = 366

 Score =  111 bits (278), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 41/154 (26%), Positives = 56/154 (36%), Gaps = 23/154 (14%)

Query: 3   KGNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
               FM  ALE A   A    +   P VGAV V + +II    ++         HAE+ A
Sbjct: 5   DDLFFMRRALELAVLGA--GSVSPNPMVGAVIVCDGEIIGEGYHQQFGG----PHAEVHA 58

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
           I     +  + +L    LYVTLEPC        C+  I    I R+  G  +P       
Sbjct: 59  I---ASVEDEALLHHSTLYVTLEPCSHFGKTPPCSDLIVEKGIPRVVIGCRDPHVKVAGK 115

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
           G      A       +  G+ E       + F K
Sbjct: 116 GIAKLQAAG----IRVTEGVLEAECIGCNEAFIK 145


>gi|302803749|ref|XP_002983627.1| hypothetical protein SELMODRAFT_228959 [Selaginella moellendorffii]
 gi|300148464|gb|EFJ15123.1| hypothetical protein SELMODRAFT_228959 [Selaginella moellendorffii]
          Length = 216

 Score =  111 bits (278), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 41/120 (34%), Positives = 62/120 (51%), Gaps = 2/120 (1%)

Query: 2   KKGNVFMSCALEEAQNAALRNEI-PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
            +   F+S A++EA       +  P GAV V NN+++    N      D TAHAE+ A+R
Sbjct: 59  DRDYKFLSKAVDEAYKGVTCGDGGPFGAVVVRNNEVVVSCHNMVLRHTDPTAHAEVTAVR 118

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
             C+ L++  L + +++ + EPC MC  AI L+RI+RL YGA       +     F   A
Sbjct: 119 EACKKLNRLELSDCEIFASCEPCPMCFGAIHLSRIKRLVYGAKAEAAIAVGF-DDFIADA 177


>gi|220904884|ref|YP_002480196.1| riboflavin biosynthesis protein RibD [Desulfovibrio desulfuricans
           subsp. desulfuricans str. ATCC 27774]
 gi|219869183|gb|ACL49518.1| riboflavin biosynthesis protein RibD [Desulfovibrio desulfuricans
           subsp. desulfuricans str. ATCC 27774]
          Length = 385

 Score =  111 bits (278), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 37/154 (24%), Positives = 58/154 (37%), Gaps = 21/154 (13%)

Query: 1   MKKGNV--FMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56
           M + +   FM  A+  AQ    +      VGAV V +  I++R  +R   L     HAE+
Sbjct: 1   MSELDYTPFMREAIALAQQGRWKTCPNPMVGAVLVRDGHIVARGWHRAFGLD----HAEV 56

Query: 57  LAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGI 110
             +             E  L VTLEPC        C  A+  A I+++  G S+P     
Sbjct: 57  DCLNDAAAQGVDP--SECTLVVTLEPCCHQGKTPPCTDAVLRAGIKKIVVGLSDPNPEAC 114

Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
               +           ++  G+     R ++ DF
Sbjct: 115 GGACRLRES-----GLDVIEGVCADACRDLVADF 143


>gi|121533690|ref|ZP_01665517.1| riboflavin biosynthesis protein RibD [Thermosinus carboxydivorans
           Nor1]
 gi|121307681|gb|EAX48596.1| riboflavin biosynthesis protein RibD [Thermosinus carboxydivorans
           Nor1]
          Length = 379

 Score =  111 bits (278), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 35/127 (27%), Positives = 50/127 (39%), Gaps = 19/127 (14%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85
           VGAV V +  I+    +        T HAEI AI     +       +  LYVTLEPC+ 
Sbjct: 27  VGAVIVKDGTIVGEGWHHRA----GTPHAEIHAINQAGDLA-----KDATLYVTLEPCSH 77

Query: 86  ------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139
                 C  AI  A I R+    ++P       G +F          E+  G+    + Q
Sbjct: 78  YGRTGPCVQAIVQAGITRVVAAMTDPNPLVAGQGFKFLRENG----VEVIEGVLATEAAQ 133

Query: 140 IIQDFFK 146
           + + F K
Sbjct: 134 LNEVFIK 140


>gi|29831349|ref|NP_825983.1| cytidine/deoxycytidine deaminase [Streptomyces avermitilis MA-4680]
 gi|29608464|dbj|BAC72518.1| putative cytidine/deoxycytidine deaminase [Streptomyces avermitilis
           MA-4680]
          Length = 153

 Score =  111 bits (278), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 33/144 (22%), Positives = 57/144 (39%), Gaps = 15/144 (10%)

Query: 6   VFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
            +++ A+EEA+       IP+GA     +  ++ R  NR  +  D + HAE  A R   R
Sbjct: 12  AWLATAVEEARAGLAEGGIPIGAALYGADGALLGRGHNRRVQDDDPSMHAETAAFRSAGR 71

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
             +        +  TL PC  C+  +    I R+  G +    GG +   +        H
Sbjct: 72  QRT---YRGTTMVTTLSPCWYCSGLVRQFGISRVVVGEAATFHGGHDWLAE--------H 120

Query: 125 SPEIYPGISEQ-RSRQIIQDFFKE 147
             EI   + +      +++ F K 
Sbjct: 121 GVEIV--LLDDPECTALLRGFIKN 142


>gi|310779807|ref|YP_003968139.1| riboflavin biosynthesis protein RibD [Ilyobacter polytropus DSM
           2926]
 gi|309749130|gb|ADO83791.1| riboflavin biosynthesis protein RibD [Ilyobacter polytropus DSM
           2926]
          Length = 359

 Score =  111 bits (278), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 35/153 (22%), Positives = 55/153 (35%), Gaps = 25/153 (16%)

Query: 4   GNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
              +M  AL+ A        +   P VGAV V N  I+    ++         HAE+ A+
Sbjct: 2   DKKYMETALKLALKG--EGNVNPNPMVGAVVVKNGTIVGEGYHKQYGG----PHAEVYAL 55

Query: 60  RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113
                           +YVTLEPC        CA  I    I++      +P       G
Sbjct: 56  NEAGSEC-----RGATIYVTLEPCSHYGKTPPCAEKIIEMGIKKCVIACLDPNPLVAGRG 110

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
            +    A      E+  G+ E+ + ++ + F K
Sbjct: 111 VKILERAG----IEVEVGLMEKEALELNRVFMK 139


>gi|46205243|ref|ZP_00209765.1| COG0590: Cytosine/adenosine deaminases [Magnetospirillum
          magnetotacticum MS-1]
          Length = 141

 Score =  111 bits (278), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 30/87 (34%), Positives = 47/87 (54%)

Query: 13 EEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILP 72
          E A         P GAV V + ++I+RA NR     D + HAE++A+R   + L +  L 
Sbjct: 1  ELALANVAEGGRPYGAVIVRDGEVIARAANRIHRTNDPSDHAEMVALRAASQRLGRPKLD 60

Query: 73 EVDLYVTLEPCTMCAAAISLARIRRLY 99
          +  +Y +  PC MC AA+ LA +++ Y
Sbjct: 61 DCIVYASGRPCPMCHAAMRLAGVKQGY 87


>gi|218264485|ref|ZP_03478318.1| hypothetical protein PRABACTJOHN_04018 [Parabacteroides johnsonii
           DSM 18315]
 gi|218221978|gb|EEC94628.1| hypothetical protein PRABACTJOHN_04018 [Parabacteroides johnsonii
           DSM 18315]
          Length = 354

 Score =  111 bits (278), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 43/161 (26%), Positives = 66/161 (40%), Gaps = 24/161 (14%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57
           M     +M+  +E A+     N  P   VGAV V   KII    +R        AHAE+ 
Sbjct: 8   MVVEEKYMARCIELAR-GGEGNTAPNPMVGAVIVHKGKIIGEGFHRKCGE----AHAEVN 62

Query: 58  AIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIE 111
           A+     +  + +L +  +YV+LEPC        CA  I    I R+  G  +P      
Sbjct: 63  AV---ASVRDEALLRDSTIYVSLEPCSHYGKTPPCAELIIKKGIPRVVVGTLDPFPEVSG 119

Query: 112 NGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF--FK-ERR 149
            G +    A      E+  G+ E+ +R +   F  F+  +R
Sbjct: 120 RGVRMLREAG----VEVVTGVLEEEARTLNPAFMTFQIRKR 156


>gi|46204383|ref|ZP_00209388.1| COG0590: Cytosine/adenosine deaminases [Magnetospirillum
           magnetotacticum MS-1]
          Length = 111

 Score =  111 bits (278), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 32/100 (32%), Positives = 45/100 (45%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
               +  A+  A ++      P GAV V  +  +    NR  +  D TAHAE+ AIR  C
Sbjct: 7   DTAHLYRAVALAVDSVAHAGGPFGAVLVTADGQVFEGNNRVTQDNDPTAHAEVTAIRRAC 66

Query: 64  RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
             L    L    LY + EPC MC A+   AR+  ++Y   
Sbjct: 67  AALGTFDLTGATLYSSCEPCPMCLASALWARVHAVHYATD 106


>gi|325276595|ref|ZP_08142337.1| riboflavin biosynthesis protein RibD [Pseudomonas sp. TJI-51]
 gi|324098274|gb|EGB96378.1| riboflavin biosynthesis protein RibD [Pseudomonas sp. TJI-51]
          Length = 376

 Score =  111 bits (278), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 36/152 (23%), Positives = 55/152 (36%), Gaps = 21/152 (13%)

Query: 4   GNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
              +M+ ALE A+           VG V V + +++    +          HAE+ A+R 
Sbjct: 9   DAHYMARALELARKGLFTTHPNPRVGCVIVRDGEVVGEGWHVRAGE----PHAEVHALRQ 64

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
                  E       YVTLEPC        CA A+  A + R+     +P       G +
Sbjct: 65  AG-----ERARGACAYVTLEPCSHHGRTPPCAEALVKAGVARVVAAMQDPNPQVAGRGLR 119

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
               A      E+  G+ E  +R +   F K 
Sbjct: 120 RLAEAG----IEVASGVLEAEARALNPGFLKR 147


>gi|294950861|ref|XP_002786810.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
 gi|239901164|gb|EER18606.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
          Length = 232

 Score =  111 bits (278), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 36/111 (32%), Positives = 51/111 (45%), Gaps = 3/111 (2%)

Query: 8   MSCALEEAQNAALRNEI-PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  A+  A       E  P GA    N+ ++  A N     +D T HAE+ AIRM   +L
Sbjct: 1   MEAAVLSATTGVKLKEGGPFGACITRNDVVVCCAHNTFFSDRDPTCHAEMNAIRMAMHLL 60

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFY 117
             + L    +Y + EPC MC  AI  + IR LY G    +    +NG ++ 
Sbjct: 61  KTDDLAGCVIYSSFEPCPMCWGAILASGIRLLYVGL--DRHTAAKNGVEYL 109



 Score = 35.3 bits (81), Expect = 3.1,   Method: Composition-based stats.
 Identities = 16/81 (19%), Positives = 30/81 (37%), Gaps = 14/81 (17%)

Query: 28  AVAV-LNNKIIS-------RAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVT 79
            + V  +NKII+        +   + +         +  IR+ CR ++   L    ++  
Sbjct: 149 CIIVNKDNKIIADSSTPSIESFTDSVDTLM------VKTIRLACRAINSPYLQGCKIFTL 202

Query: 80  LEPCTMCAAAISLARIRRLYY 100
             P     AA   A +  L+Y
Sbjct: 203 EAPDVESHAACLWALVDSLHY 223


>gi|283784233|ref|YP_003364098.1| riboflavin biosynthesis protein [Citrobacter rodentium ICC168]
 gi|282947687|emb|CBG87242.1| riboflavin biosynthesis protein [Citrobacter rodentium ICC168]
          Length = 367

 Score =  110 bits (277), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 35/155 (22%), Positives = 56/155 (36%), Gaps = 21/155 (13%)

Query: 3   KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +  ++M+ AL+ A       +  P VG V V + +I+    +          HAE+ A+R
Sbjct: 2   QDELYMARALKLAARGRFTTHPNPNVGCVIVKDGEIVGEGYHYRAGE----PHAEVHALR 57

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           M               YVTLEPC        C  A+  A + R+     +P       G 
Sbjct: 58  MAGEKA-----KGATAYVTLEPCSHHGRTPPCCDALIAAGMARVVAAMQDPNPQVAGRGL 112

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
                A      E+  G+    +  + + F K  R
Sbjct: 113 YRLQQAG----IEVSHGLMMSEAEALNKGFLKRMR 143


>gi|190571227|ref|YP_001975585.1| riboflavin biosynthesis protein RibD [Wolbachia endosymbiont of
           Culex quinquefasciatus Pel]
 gi|190357499|emb|CAQ54935.1| riboflavin biosynthesis protein RibD [Wolbachia endosymbiont of
           Culex quinquefasciatus Pel]
          Length = 405

 Score =  110 bits (277), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 37/153 (24%), Positives = 60/153 (39%), Gaps = 25/153 (16%)

Query: 3   KGNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
             + FMS AL+ A+ +     +   P VG + V N  +I               HAE++A
Sbjct: 2   TDDYFMSIALKLAEKSL--GSVAPNPAVGCIIVKNGMVIGEGY----TGIGGRPHAEVVA 55

Query: 59  IRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIEN 112
           ++    +          +YVTLEPC        C A I  + I+R+   A +P       
Sbjct: 56  LQNAKDLTHS-----ATMYVTLEPCCHFGVTEPCTAEIIKSGIKRVVIAAIDPDSRVSGG 110

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
           G +    A      E+  GI ++ +  +   FF
Sbjct: 111 GIKALKEAG----IEVEQGIMQKEAEVLNVGFF 139


>gi|323488255|ref|ZP_08093505.1| riboflavin biosynthesis protein RibD [Planococcus donghaensis
           MPA1U2]
 gi|323398113|gb|EGA90909.1| riboflavin biosynthesis protein RibD [Planococcus donghaensis
           MPA1U2]
          Length = 367

 Score =  110 bits (277), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 41/152 (26%), Positives = 65/152 (42%), Gaps = 21/152 (13%)

Query: 1   MKKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           M   + +M+ AL  AQ      +  P VG+V V +N+I+    +          HAEI A
Sbjct: 1   MSNHDFYMNLALTNAQTLKGQTDPNPLVGSVIVNDNRIVGIGTHLKAGE----PHAEIHA 56

Query: 59  IRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIEN 112
           +RM   +          +YVTLEPC+       CA AI  A I ++     +P      N
Sbjct: 57  LRMAGDMSQ-----GATIYVTLEPCSHFGRTGPCAQAIIDAGIEKVVIATLDPNPIVAGN 111

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
           G +    A      E+  G+ E+ + ++ + F
Sbjct: 112 GVRMLKEAG----IEVIVGVREEEAIKMNEVF 139


>gi|114703609|emb|CAL46259.1| cytidine deaminase [Paspalum simplex]
          Length = 148

 Score =  110 bits (277), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 39/112 (34%), Positives = 58/112 (51%), Gaps = 1/112 (0%)

Query: 2   KKGNVFMSCALEEAQNAALRNEI-PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
            + + F+S A+EEA       +  P GAV V N++++    N   +  D TAHAE+ AIR
Sbjct: 29  DRDHKFLSKAVEEAYRGVDCGDGGPFGAVVVRNDEVVVSCHNMVLKHTDPTAHAEVTAIR 88

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN 112
             C+ L +  L + ++Y + EPC MC  A+ L  I+RL YG        I  
Sbjct: 89  EACKKLGKIELSDCEIYASCEPCPMCFGAVYLFGIKRLVYGDKAEAAIAIGF 140


>gi|166030622|ref|ZP_02233451.1| hypothetical protein DORFOR_00288 [Dorea formicigenerans ATCC
           27755]
 gi|166029624|gb|EDR48381.1| hypothetical protein DORFOR_00288 [Dorea formicigenerans ATCC
           27755]
          Length = 377

 Score =  110 bits (277), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 37/151 (24%), Positives = 54/151 (35%), Gaps = 21/151 (13%)

Query: 3   KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
               +M  A+E A+      N  P VGAV V + +II    +          HAE  AI 
Sbjct: 4   TDQDYMKRAIELAKKGEGWTNPNPMVGAVIVKDGRIIGEGYHARCGEL----HAERNAI- 58

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
                   E      LYVTLEPC        C  AI   +I+++  G+ +P       G 
Sbjct: 59  ----ASLTESAEGATLYVTLEPCCHYGKTPPCTEAILEQKIKKVVIGSRDPNPKVAGKGA 114

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
           +    A       +       +  ++   FF
Sbjct: 115 KILRDAG----VAVVEDFMRDKCDELNPIFF 141


>gi|182417348|ref|ZP_02948682.1| riboflavin biosynthesis protein RibD [Clostridium butyricum 5521]
 gi|237668576|ref|ZP_04528560.1| riboflavin biosynthesis protein RibD [Clostridium butyricum E4 str.
           BoNT E BL5262]
 gi|182378778|gb|EDT76300.1| riboflavin biosynthesis protein RibD [Clostridium butyricum 5521]
 gi|237656924|gb|EEP54480.1| riboflavin biosynthesis protein RibD [Clostridium butyricum E4 str.
           BoNT E BL5262]
          Length = 360

 Score =  110 bits (277), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 37/153 (24%), Positives = 59/153 (38%), Gaps = 25/153 (16%)

Query: 4   GNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
              +M  ALE A        +   P VGAV V +NK+I    +         AHAE  A+
Sbjct: 2   DEFYMKRALELAIKGV--GMVNPNPMVGAVIVKDNKVIGEGFHEKYGH----AHAERNAV 55

Query: 60  RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113
           +        E +    +YVTLEPC        C   +   ++R++  G  +P        
Sbjct: 56  KNAV-----EDIEGATVYVTLEPCAHYGKTPPCVDLLIEKKVRKVVIGMLDPNPLVAGKS 110

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
            +           E+  G+ E+  R++ + F K
Sbjct: 111 IKKLKENN----IEVKVGVKEKECRKLNEVFIK 139


>gi|218289836|ref|ZP_03494036.1| riboflavin biosynthesis protein RibD [Alicyclobacillus
           acidocaldarius LAA1]
 gi|218240127|gb|EED07312.1| riboflavin biosynthesis protein RibD [Alicyclobacillus
           acidocaldarius LAA1]
          Length = 371

 Score =  110 bits (277), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 40/153 (26%), Positives = 62/153 (40%), Gaps = 21/153 (13%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           M +   +M  ALE A+    +    P VGA+ V    ++ +  +        T HAE+ A
Sbjct: 1   MTEDERYMRMALEVARLGEGQTSPNPMVGAIVVNGGLVVGQGAHLMA----GTPHAEVHA 56

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
           +RM              LYVTLEPC        C  AI  + +RR+   A +        
Sbjct: 57  LRMAGDAA-----KGATLYVTLEPCNHHGRTPPCTDAILASGVRRVVVAALDVDPRTAGL 111

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
           G +    A      E+  G+ E  +R++ + FF
Sbjct: 112 GVKRLQDAGL----EVSVGVLEVEARELNRHFF 140


>gi|329122085|ref|ZP_08250693.1| riboflavin biosynthesis protein RibD [Dialister micraerophilus DSM
           19965]
 gi|327466892|gb|EGF12408.1| riboflavin biosynthesis protein RibD [Dialister micraerophilus DSM
           19965]
          Length = 378

 Score =  110 bits (277), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 34/154 (22%), Positives = 61/154 (39%), Gaps = 21/154 (13%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           + +   +MS AL+ A++     E  P VGAV V N K++    ++         HAE+ A
Sbjct: 3   INEDEKWMSHALDLAKHGYWYTETNPLVGAVLVKNGKVVGEGWHKKYGD----VHAEVNA 58

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
            +       +E      LYVTLEPC        C   +   +++R+     +P       
Sbjct: 59  FKN-----CKENTEHATLYVTLEPCCHYGKTPPCLNLVLQKKVKRVVIAMKDPNPLVSGK 113

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
             +           ++  G+ E  + ++ + F K
Sbjct: 114 SIKILKENG----IQVIVGVLENEAVKLNEIFIK 143


>gi|170719753|ref|YP_001747441.1| riboflavin biosynthesis protein RibD [Pseudomonas putida W619]
 gi|169757756|gb|ACA71072.1| riboflavin biosynthesis protein RibD [Pseudomonas putida W619]
          Length = 376

 Score =  110 bits (277), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 37/152 (24%), Positives = 58/152 (38%), Gaps = 21/152 (13%)

Query: 4   GNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
              +M+ ALE A+      +  P VG V V + +++    +          HAE+ A+R 
Sbjct: 9   DAHYMARALELARKGIYTTHPNPRVGCVIVRDGEVVGEGWHVRAGE----PHAEVHALRQ 64

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
                  E       YVTLEPC        CA A+  A + R+     +P       G +
Sbjct: 65  AG-----ERARGACAYVTLEPCSHHGRTPPCAEALVQAGVARVVAAMQDPNPQVAGQGLR 119

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
               A      E+  G+ E ++R +   F K 
Sbjct: 120 RLAEAG----IEVASGVLEAQARALNPGFLKR 147


>gi|261822528|ref|YP_003260634.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Pectobacterium wasabiae WPP163]
 gi|261606541|gb|ACX89027.1| riboflavin biosynthesis protein RibD [Pectobacterium wasabiae
           WPP163]
          Length = 369

 Score =  110 bits (277), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 37/157 (23%), Positives = 57/157 (36%), Gaps = 21/157 (13%)

Query: 1   MKKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           M +   +M+ ALE A+         P VG V V + +I+    +          HAE+ A
Sbjct: 1   MPQDAFYMARALELARRGRFTTAPNPNVGCVIVRDGEIVGEGYHFRAGE----PHAEVHA 56

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
           +RM       E       YVTLEPC        CA A+  A + R+     +P       
Sbjct: 57  LRMAG-----ERARGATAYVTLEPCSHHGRTPPCADALIAAGVSRVVAAMQDPNPQVAGR 111

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
           G      +       +  G+    + ++   F K  R
Sbjct: 112 GLHRLQQSG----ITVSHGVMMAEAEKVNVGFLKRMR 144


>gi|269103255|ref|ZP_06155952.1| diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Photobacterium damselae subsp. damselae CIP
           102761]
 gi|268163153|gb|EEZ41649.1| diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Photobacterium damselae subsp. damselae CIP
           102761]
          Length = 378

 Score =  110 bits (277), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 38/152 (25%), Positives = 55/152 (36%), Gaps = 21/152 (13%)

Query: 4   GNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
            +  MS A+  A+         P VG V V N +I+    +    L     HAE+ A+R 
Sbjct: 6   DHKMMSRAIALAKKGRFTTAPNPNVGCVIVNNGQIVGEGFHYRAGL----PHAEVFALRA 61

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
                          YVTLEPC        CA A+  A I R+     +P      NG  
Sbjct: 62  AGDKA-----RGATAYVTLEPCSHYGRTPPCALALIEAGISRVVCAMVDPNPKVAGNGVT 116

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
                  +    +  G+ EQ ++ +   F K 
Sbjct: 117 LLQ----NAGVTVEVGLLEQDAKALNLGFIKA 144


>gi|117620375|ref|YP_856166.1| cytidine/deoxycytidylate deaminase, zinc-binding region [Aeromonas
           hydrophila subsp. hydrophila ATCC 7966]
 gi|117561782|gb|ABK38730.1| cytidine/deoxycytidylate deaminase, zinc-binding region [Aeromonas
           hydrophila subsp. hydrophila ATCC 7966]
          Length = 167

 Score =  110 bits (277), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 27/110 (24%), Positives = 49/110 (44%), Gaps = 3/110 (2%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
               ++  AL+ A +   +   P  A+ V +N++++ A N   +  D T HAE+ A+R  
Sbjct: 22  SHQEWLEQALQLALHNRRQGGRPFAALLVRDNQLVTSAVNAMHQDGDPTRHAELEALRQA 81

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN 112
            ++     L    +Y +  PC MC +A+ +  I  +YY   N        
Sbjct: 82  SQVGP---LAGAIVYASGHPCPMCLSALVMNGIAAVYYAFDNEDAAPFGF 128


>gi|254787586|ref|YP_003075015.1| riboflavin biosynthesis protein RibD [Teredinibacter turnerae
           T7901]
 gi|237683563|gb|ACR10827.1| riboflavin biosynthesis protein RibD [Teredinibacter turnerae
           T7901]
          Length = 363

 Score =  110 bits (277), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 39/155 (25%), Positives = 58/155 (37%), Gaps = 21/155 (13%)

Query: 4   GNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
             VFM  AL  A+        P   VG V V +  +I    +          HAE+ A++
Sbjct: 7   DTVFMQQALRLAEEGLNTT-TPNPRVGCVLVKDGVVIGEGYHHRAGE----PHAEVNALK 61

Query: 61  MGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGT 114
               ++ ++ L     YVTLEPC+       CA A+  A I RL Y   +P       G 
Sbjct: 62  S---VIDRQQLAGATAYVTLEPCSHTGKTGPCADALVDAGIGRLVYAMEDPNPLVAGRGL 118

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
                A       +   + E+ +  +   F K  R
Sbjct: 119 DKLQRAG----VVVDGPLLEEEALSLNLGFVKRMR 149


>gi|330830923|ref|YP_004393875.1| pyrimidine deaminase/reductase RibD [Aeromonas veronii B565]
 gi|328806059|gb|AEB51258.1| Pyrimidine deaminase/reductase RibD [Aeromonas veronii B565]
          Length = 369

 Score =  110 bits (277), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 37/156 (23%), Positives = 57/156 (36%), Gaps = 21/156 (13%)

Query: 2   KKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
           +    +MS ALE A+         P VGAV V +  ++    ++         HAE+ A+
Sbjct: 4   QDDYQWMSRALELARRGRYTTAPNPCVGAVLVKDGVVVGEGWHQKAGE----PHAEVYAL 59

Query: 60  RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113
           R        +       YVTLEPC        CA A+  A + R+     +P       G
Sbjct: 60  RAAG-----DNARGATAYVTLEPCSHHGRTPPCAEALINAGVARVVAAMVDPNPQVGGRG 114

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +  + A          G+    +  +   FFK  R
Sbjct: 115 LRMLSEAGIKTDF----GLLASEAEALNPGFFKRMR 146


>gi|326390344|ref|ZP_08211903.1| riboflavin biosynthesis protein RibD [Thermoanaerobacter
           ethanolicus JW 200]
 gi|325993621|gb|EGD52054.1| riboflavin biosynthesis protein RibD [Thermoanaerobacter
           ethanolicus JW 200]
          Length = 360

 Score =  110 bits (277), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 39/148 (26%), Positives = 61/148 (41%), Gaps = 21/148 (14%)

Query: 5   NVFMSCALEEAQNAAL-RNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
             +M  AL+ A+      N  P VGAV V N KII    +          HAE+ A++  
Sbjct: 2   EEYMKRALKLAEKGWGYTNPNPLVGAVIVKNGKIIGEGYHEYFGG----PHAEVNALKNA 57

Query: 63  CRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116
                 E +    ++VTLEPC        C   I  + I+R+Y    +P      N  + 
Sbjct: 58  V-----EDVKGSTMFVTLEPCSHYGKTPPCVEEIIKSGIKRVYIAMEDPNPKVSGNSIKR 112

Query: 117 YTLATCHHSPEIYPGISEQRSRQIIQDF 144
              A      E+  G+ E+ +R++ + F
Sbjct: 113 LKEAG----IEVQVGMMEKEARKLNEIF 136


>gi|167031576|ref|YP_001666807.1| riboflavin biosynthesis protein RibD [Pseudomonas putida GB-1]
 gi|166858064|gb|ABY96471.1| riboflavin biosynthesis protein RibD [Pseudomonas putida GB-1]
          Length = 376

 Score =  110 bits (277), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 37/152 (24%), Positives = 55/152 (36%), Gaps = 21/152 (13%)

Query: 4   GNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
              +M+ ALE A+           VG V V + +++    +          HAE+ A+R 
Sbjct: 9   DAHYMARALELARKGLYTTHPNPRVGCVIVRDGEVVGEGWHVRAGE----PHAEVHALRQ 64

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
                  E       YVTLEPC        CA A+  A + R+     +P       G Q
Sbjct: 65  AG-----ERAIGACAYVTLEPCSHHGRTPPCAEALVKAGVARVVAAMQDPNPQVAGQGLQ 119

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
               A      E+  G+ E  +R +   F K 
Sbjct: 120 RLAEAG----IEVASGVLETEARALNPGFLKR 147


>gi|71423764|ref|XP_812564.1| deaminase [Trypanosoma cruzi strain CL Brener]
 gi|70877358|gb|EAN90713.1| deaminase, putative [Trypanosoma cruzi]
          Length = 202

 Score =  110 bits (276), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 45/174 (25%), Positives = 70/174 (40%), Gaps = 31/174 (17%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAV-------------LNNK-----------IISRA 40
           + FM  A  EA+ A    E+PVG V V              +N            I +R 
Sbjct: 14  DAFMLAAFAEARAALAEGEVPVGCVLVPAEATCPANAGRLDDNNPNNSGASLGSLIAARG 73

Query: 41  GNRNRELKDVTAHAEILA----IRMGCRILSQE--ILPEVDLYVTLEPCTMCAAAISLAR 94
            N   +     AHAE +A    +R       +    L    LYV +EPC MCAA +   R
Sbjct: 74  RNATNKEHHALAHAEFVAVEALLRDAAEKGRKPPASLAGYVLYVVVEPCIMCAAMLLYNR 133

Query: 95  IRRLYYGASNPKGGGIENGTQFYTLATCH-HSPEIYPGISEQRSRQIIQDFFKE 147
           I+++Y+G  NP+ GG       +   +    + E   G   + +  ++Q+F+  
Sbjct: 134 IKKVYFGCGNPRFGGNGTVLAVHAAKSTSAPAYESCGGHRAEEAIALLQEFYSR 187


>gi|258651669|ref|YP_003200825.1| cytosine deaminase [Nakamurella multipartita DSM 44233]
 gi|258554894|gb|ACV77836.1| Cytosine deaminase [Nakamurella multipartita DSM 44233]
          Length = 153

 Score =  110 bits (276), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 29/146 (19%), Positives = 57/146 (39%), Gaps = 12/146 (8%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
              +++ A+  A+       IP+GA  +++  +++   N+  +L     H E   +    
Sbjct: 7   DADYLAAAVRAARQGLAEGGIPIGAALIVDGGVLATGWNKRVQLGSAIRHGETDCLENAG 66

Query: 64  RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123
           R+ +  +     +  TL PC MC  AI L +I R+  G +    GG E            
Sbjct: 67  RLPAT-VYARSVMVTTLSPCDMCTGAILLYKIPRVIVGENQTFYGGEE----LLRARG-- 119

Query: 124 HSPEIYPGISEQ-RSRQIIQDFFKER 148
              E+   + +      ++  F  +R
Sbjct: 120 --VEVT--VLDDPECVAMMTAFIADR 141


>gi|71652572|ref|XP_814939.1| deaminase [Trypanosoma cruzi strain CL Brener]
 gi|70879957|gb|EAN93088.1| deaminase, putative [Trypanosoma cruzi]
          Length = 202

 Score =  110 bits (276), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 45/174 (25%), Positives = 70/174 (40%), Gaps = 31/174 (17%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAV-------------LNNK-----------IISRA 40
           + FM  A  EA+ A    E+PVG V V              +N            I +R 
Sbjct: 14  DAFMLAAFAEARAALAEGEVPVGCVLVPAEASCPANAGRLDDNNSNNSEASLGSLIAARG 73

Query: 41  GNRNRELKDVTAHAEILA----IRMGCRILSQE--ILPEVDLYVTLEPCTMCAAAISLAR 94
            N   +     AHAE +A    +R       +    L    LYV +EPC MCAA +   R
Sbjct: 74  RNATNKEHHALAHAEFVAVEALLRDAAEKGRKPPASLAGYVLYVVVEPCIMCAAMLLYNR 133

Query: 95  IRRLYYGASNPKGGGIENGTQFYTLATCH-HSPEIYPGISEQRSRQIIQDFFKE 147
           I+++Y+G  NP+ GG       +   +    + E   G   + +  ++Q+F+  
Sbjct: 134 IKKVYFGCGNPRFGGNGTVLAVHAAKSTSAPAYESCGGHRAEEAIALLQEFYSR 187


>gi|223041905|ref|ZP_03612090.1| riboflavin biosynthesis protein [Actinobacillus minor 202]
 gi|223017259|gb|EEF15686.1| riboflavin biosynthesis protein [Actinobacillus minor 202]
          Length = 364

 Score =  110 bits (276), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 36/153 (23%), Positives = 59/153 (38%), Gaps = 22/153 (14%)

Query: 1   MKKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           M   + +M+ A+  A+ A    N  P VG V V N++I++   +          HAE  A
Sbjct: 1   MTDFD-YMARAIALAEKARGWTNPNPLVGCVIVKNDEILAEGYHERIGG----WHAERNA 55

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
           I     + S   L     YVTLEPC        C+  +    I +++ G+ +P       
Sbjct: 56  I-----LNSSADLRGATAYVTLEPCCHHGRTPPCSDLLIERGISKVFIGSRDPNPLVSGK 110

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
           G +    A      E+      +   ++   FF
Sbjct: 111 GVKQLQDAG----IEVVTDFMREECDRLNPIFF 139


>gi|15924761|ref|NP_372295.1| riboflavin specific deaminase [Staphylococcus aureus subsp. aureus
           Mu50]
 gi|15927345|ref|NP_374878.1| riboflavin specific deaminase [Staphylococcus aureus subsp. aureus
           N315]
 gi|148268246|ref|YP_001247189.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp.
           aureus JH9]
 gi|150394314|ref|YP_001316989.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp.
           aureus JH1]
 gi|156980087|ref|YP_001442346.1| riboflavin specific deaminase [Staphylococcus aureus subsp. aureus
           Mu3]
 gi|253315858|ref|ZP_04839071.1| riboflavin specific deaminase [Staphylococcus aureus subsp. aureus
           str. CF-Marseille]
 gi|255006556|ref|ZP_05145157.2| riboflavin specific deaminase [Staphylococcus aureus subsp. aureus
           Mu50-omega]
 gi|257794151|ref|ZP_05643130.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus A9781]
 gi|258420684|ref|ZP_05683623.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus A9719]
 gi|258438334|ref|ZP_05689618.1| riboflavin specific deaminase [Staphylococcus aureus A9299]
 gi|258443792|ref|ZP_05692131.1| riboflavin specific deaminase [Staphylococcus aureus A8115]
 gi|258446003|ref|ZP_05694179.1| riboflavin specific deaminase [Staphylococcus aureus A6300]
 gi|258448269|ref|ZP_05696396.1| riboflavin specific deaminase [Staphylococcus aureus A6224]
 gi|258454203|ref|ZP_05702174.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus A5937]
 gi|282893262|ref|ZP_06301496.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus A8117]
 gi|282927897|ref|ZP_06335508.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus A10102]
 gi|295406080|ref|ZP_06815888.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus A8819]
 gi|296276038|ref|ZP_06858545.1| riboflavin specific deaminase [Staphylococcus aureus subsp. aureus
           MR1]
 gi|297244995|ref|ZP_06928872.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus A8796]
 gi|13701564|dbj|BAB42857.1| riboflavin specific deaminase [Staphylococcus aureus subsp. aureus
           N315]
 gi|14247543|dbj|BAB57933.1| riboflavin specific deaminase [Staphylococcus aureus subsp. aureus
           Mu50]
 gi|147741315|gb|ABQ49613.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase /
           diaminohydroxyphosphoribosylaminopyrimidine deaminase
           [Staphylococcus aureus subsp. aureus JH9]
 gi|149946766|gb|ABR52702.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp.
           aureus JH1]
 gi|156722222|dbj|BAF78639.1| riboflavin specific deaminase [Staphylococcus aureus subsp. aureus
           Mu3]
 gi|257788123|gb|EEV26463.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus A9781]
 gi|257843288|gb|EEV67698.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus A9719]
 gi|257848378|gb|EEV72369.1| riboflavin specific deaminase [Staphylococcus aureus A9299]
 gi|257851198|gb|EEV75141.1| riboflavin specific deaminase [Staphylococcus aureus A8115]
 gi|257855245|gb|EEV78184.1| riboflavin specific deaminase [Staphylococcus aureus A6300]
 gi|257858508|gb|EEV81384.1| riboflavin specific deaminase [Staphylococcus aureus A6224]
 gi|257863655|gb|EEV86412.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus A5937]
 gi|282590407|gb|EFB95486.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus A10102]
 gi|282764580|gb|EFC04706.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus A8117]
 gi|285817450|gb|ADC37937.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase /
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Staphylococcus aureus 04-02981]
 gi|294969077|gb|EFG45098.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus A8819]
 gi|297178075|gb|EFH37323.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus A8796]
 gi|315130592|gb|EFT86578.1| riboflavin specific deaminase [Staphylococcus aureus subsp. aureus
           CGS03]
 gi|329727599|gb|EGG64055.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp.
           aureus 21172]
          Length = 347

 Score =  110 bits (276), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 39/153 (25%), Positives = 65/153 (42%), Gaps = 26/153 (16%)

Query: 5   NVFMSCALEEAQNAALRNEI--PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
           + FM  A++ A     +  +  PVGAV V   +I+    +  +  K    HAE+ A+ M 
Sbjct: 2   SQFMDYAIQLANMVQGQTGVNPPVGAVVVNEGRIVGIGAHLRKGDK----HAEVQALDMA 57

Query: 63  CRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116
                Q+      +Y+TLEPC        C   I   +I ++ Y   +       N    
Sbjct: 58  -----QQNAEGATIYITLEPCSHFGSTPPCVNKIIDCKIAKVVYATKD-------NSLDT 105

Query: 117 YTLATCH-HSPEIYPGISEQRSRQIIQDFFKER 148
           +   T   H  E+   + ++R+ Q+ QDFFK +
Sbjct: 106 HGDETLRAHGIEVEC-VDDERASQLYQDFFKAK 137


>gi|269138330|ref|YP_003295030.1| riboflavin biosynthesis protein RibD [Edwardsiella tarda EIB202]
 gi|267983990|gb|ACY83819.1| riboflavin biosynthesis protein RibD [Edwardsiella tarda EIB202]
 gi|304558362|gb|ADM41026.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase /
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Edwardsiella tarda FL6-60]
          Length = 373

 Score =  110 bits (276), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 36/155 (23%), Positives = 55/155 (35%), Gaps = 21/155 (13%)

Query: 3   KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
               +M+ A E A+         P VG V V +++I+    +          HAE+ A+R
Sbjct: 8   SDEFYMARAFELARRGRFTTTPNPNVGCVLVRDDRIVGEGFHLRAGE----PHAEVHALR 63

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           M   +           YVTLEPC        CA A+  A + R+     +P       G 
Sbjct: 64  MAGELA-----RGATAYVTLEPCSHHGRTPPCADALVAAGVSRVVAAMQDPNPHVAGRGL 118

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
                A       +  G+    +  I + F K  R
Sbjct: 119 YRLQQAG----ISVRHGVMLAEAEAINKGFLKRMR 149


>gi|325860399|ref|ZP_08173511.1| riboflavin biosynthesis protein RibD [Prevotella denticola CRIS
           18C-A]
 gi|325482057|gb|EGC85078.1| riboflavin biosynthesis protein RibD [Prevotella denticola CRIS
           18C-A]
          Length = 380

 Score =  110 bits (276), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 35/152 (23%), Positives = 61/152 (40%), Gaps = 18/152 (11%)

Query: 2   KKGNVFMSCALEEAQNA--ALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILA 58
           +   ++M   L+ A+N     +    VGAV V  + +II    +          H+E+ A
Sbjct: 5   ETDEIYMRRCLQLARNGQQLAKPNPMVGAVIVSKDGRIIGEGYHVRCGEG----HSEVNA 60

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
                R   + +L E  +YV+LEPC        CA  I    +RR+  G  +P       
Sbjct: 61  F-ASVRKEDEALLHEATVYVSLEPCSHYGKTPPCADLIISKGVRRVVCGCIDPFSKVQGR 119

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
           G +    A      ++  G+ E+   ++ + F
Sbjct: 120 GVKRLREAG----IDVTVGVLEKECLELNKRF 147


>gi|313673619|ref|YP_004051730.1| riboflavin biosynthesis protein ribd [Calditerrivibrio
           nitroreducens DSM 19672]
 gi|312940375|gb|ADR19567.1| riboflavin biosynthesis protein RibD [Calditerrivibrio
           nitroreducens DSM 19672]
          Length = 385

 Score =  110 bits (276), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 44/152 (28%), Positives = 62/152 (40%), Gaps = 23/152 (15%)

Query: 8   MSCALEEAQ--NAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M  A++ A            VGAV V N K+I R  +          HAEI A+      
Sbjct: 8   MDEAIQLALMGKGYNYTNPIVGAVVVKNGKVIGRGYHT--GFGMP--HAEIEAL-----K 58

Query: 66  LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
             +E     DLYVTLEPC        C  AI  + I+R++ G  +P         +    
Sbjct: 59  DCEESPEGGDLYVTLEPCSTTGKTPPCTDAIIKSGIKRVFIGVVDPNPNHSGKAIKILND 118

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDF--FKERR 149
           A      E++ G +E    +II+DF  F  +R
Sbjct: 119 AG----IEVFLGFNEHVCAEIIEDFTKFILKR 146


>gi|239993720|ref|ZP_04714244.1| Riboflavin biosynthesis protein RibD [Alteromonas macleodii ATCC
           27126]
          Length = 379

 Score =  110 bits (276), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 38/155 (24%), Positives = 62/155 (40%), Gaps = 18/155 (11%)

Query: 2   KKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVL-NNKIISRAGNRNRELKDVTAHAEILA 58
           K    +M+ A++ AQ      +  P VG V V  NN+++ +  +    ++  T HAE+ A
Sbjct: 7   KNDYFWMAKAIQLAQQGRFTTSPNPRVGCVIVDENNQLLGQGYH----IQAGTPHAEVHA 62

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
           +R       Q        YVTLEPC        CA A+  A++ R+    ++P      N
Sbjct: 63  LRHASNARPQGA-KGATAYVTLEPCSHFGRTPPCAVALVEAKVARVVIAMTDPNPNVCGN 121

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
           G      A      E+   +    +  +   F K 
Sbjct: 122 GISILQEAG----IEVVSEVMAAEAAALNPGFIKR 152


>gi|241667512|ref|ZP_04755090.1| pyrimidine reductase/pyrimidine deaminase [Francisella philomiragia
           subsp. philomiragia ATCC 25015]
 gi|254876058|ref|ZP_05248768.1| pyrimidine reductase/pyrimidine deaminase [Francisella philomiragia
           subsp. philomiragia ATCC 25015]
 gi|254842079|gb|EET20493.1| pyrimidine reductase/pyrimidine deaminase [Francisella philomiragia
           subsp. philomiragia ATCC 25015]
          Length = 356

 Score =  110 bits (276), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 41/154 (26%), Positives = 59/154 (38%), Gaps = 22/154 (14%)

Query: 1   MKK-GNVFMSCALEEAQNAALR--NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57
           MK   N +M  AL  A    L       VG + V N  IIS   +         AHAEI 
Sbjct: 1   MKNIENYYMQQALTLANRGRLSVSPNPMVGCIIVKNGAIISEGWHEAVGE----AHAEIY 56

Query: 58  AIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIE 111
           A++                YVTLEPC        C  A+  A I+++     +P      
Sbjct: 57  ALKKAGDKA-----KGATAYVTLEPCCHHGRTPPCTDALIRAGIQKVVVATLDPNPLVAG 111

Query: 112 NGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
            G Q    A      E+  GI ++++++  + FF
Sbjct: 112 KGIQKLKDAG----IEVKVGILQKQAQEQNKIFF 141


>gi|167626935|ref|YP_001677435.1| pyrimidine reductase/pyrimidine deaminase [Francisella philomiragia
           subsp. philomiragia ATCC 25017]
 gi|167596936|gb|ABZ86934.1| pyrimidine reductase/pyrimidine deaminase [Francisella philomiragia
           subsp. philomiragia ATCC 25017]
          Length = 356

 Score =  110 bits (276), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 41/154 (26%), Positives = 59/154 (38%), Gaps = 22/154 (14%)

Query: 1   MKK-GNVFMSCALEEAQNAALR--NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57
           MK   N +M  AL  A    L       VG + V N  IIS   +         AHAEI 
Sbjct: 1   MKNIENYYMQQALTLANRGRLSVSPNPMVGCIIVKNGAIISEGWHEAVGE----AHAEIY 56

Query: 58  AIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIE 111
           A++                YVTLEPC        C  A+  A I+++     +P      
Sbjct: 57  ALKKAGDKA-----KGATAYVTLEPCCHHGRTPPCTDALIRAGIQKVVVATLDPNPLVAG 111

Query: 112 NGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
            G Q    A      E+  GI ++++++  + FF
Sbjct: 112 KGIQKLKDAG----IEVKVGILQKQAQEQNKIFF 141


>gi|152968939|ref|YP_001334048.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Klebsiella pneumoniae subsp. pneumoniae MGH
           78578]
 gi|150953788|gb|ABR75818.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/
           5-amino-6-(5-phosphoribosylamino) uracil reductase
           [Klebsiella pneumoniae subsp. pneumoniae MGH 78578]
          Length = 367

 Score =  110 bits (276), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 35/155 (22%), Positives = 56/155 (36%), Gaps = 21/155 (13%)

Query: 3   KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +  ++M+ AL+ A       +  P VG V V + +I+    +          HAE+ A+R
Sbjct: 2   QDEMYMARALKLAARGRFTTHPNPNVGCVIVKDGEIVGEGFHYRAGE----PHAEVHALR 57

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           M               YVTLEPC        C  A+  A + R+     +P       G 
Sbjct: 58  MAGEKA-----RGATAYVTLEPCSHHGRTPPCCDALIAAGVSRVVAAMQDPNPQVAGRGL 112

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
                A      E+  G+    +  + + F K  R
Sbjct: 113 YRLQQAG----IEVSHGLMMNEAEALNKGFLKRMR 143


>gi|269469107|gb|EEZ80655.1| pyrimidine deaminase [uncultured SUP05 cluster bacterium]
          Length = 350

 Score =  110 bits (276), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 35/154 (22%), Positives = 61/154 (39%), Gaps = 21/154 (13%)

Query: 2   KKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
           K  + +M+ AL+ A          P VG V V +++II++  ++        AH EI A+
Sbjct: 7   KNDSHYMAIALKLANEGRYGVGANPMVGCVIVKDDQIIAKGYHQTFGE----AHGEINAL 62

Query: 60  RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113
           +                YVTLEPC        CA AI  +  +++     +P       G
Sbjct: 63  KQ-----IDHQAHGATFYVTLEPCSHQGKTPPCAQAIIDSGAKKVIIALLDPNPLVSGKG 117

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
                    +   E+  G+ E ++ ++ + F K 
Sbjct: 118 MAMLE----NSGIEVITGLMENKALELNRGFVKR 147


>gi|182415465|ref|YP_001820531.1| riboflavin biosynthesis protein RibD [Opitutus terrae PB90-1]
 gi|177842679|gb|ACB76931.1| riboflavin biosynthesis protein RibD [Opitutus terrae PB90-1]
          Length = 389

 Score =  110 bits (276), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 36/149 (24%), Positives = 60/149 (40%), Gaps = 24/149 (16%)

Query: 2   KKGNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57
                FM  ALE A+      +    P VGA+ V   ++++   +     +D   HAE L
Sbjct: 7   NNHETFMRRALEVARKGW--GDTHPNPMVGALIVEEGRVVAEGFHA----QDGGPHAERL 60

Query: 58  AIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIE 111
           A+        +       +YVTLEPC+       C  AI  + I+++  GA++P      
Sbjct: 61  ALLN----RGKPPRAGATMYVTLEPCSTSGRTGACTDAIISSGIKQVVVGATDPNPEHSG 116

Query: 112 NGTQFYTLATCHHSPEIYPGISEQRSRQI 140
            G +    A      E+  G+ E+    +
Sbjct: 117 KGFEVLRAAG----VEVIHGVLERECTDL 141


>gi|228954395|ref|ZP_04116421.1| RibD (Riboflavin-specific deaminase) [Bacillus thuringiensis
           serovar kurstaki str. T03a001]
 gi|228805327|gb|EEM51920.1| RibD (Riboflavin-specific deaminase) [Bacillus thuringiensis
           serovar kurstaki str. T03a001]
          Length = 373

 Score =  110 bits (276), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 38/162 (23%), Positives = 65/162 (40%), Gaps = 26/162 (16%)

Query: 1   MKK--GNVFMSCALEEAQ-NAALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56
           MKK     +M  AL+ A+  +   +  P VGAV V +  I+    +     +    HAE+
Sbjct: 1   MKKMTDQEYMRIALQLAEGTSGQTSPNPMVGAVVVKDGNIVGMGAHLRAGEE----HAEV 56

Query: 57  LAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGI 110
            A++M  +        +  +YVTLEPC        C   +    ++R+     +      
Sbjct: 57  HALQMAGQ-----NAKDATVYVTLEPCSHFGKTPPCCELLIEKGVKRVVIATLDCNPLVS 111

Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF---KERR 149
            NG +    A      E+  G+ E  +  + + FF   K +R
Sbjct: 112 GNGKRRLEEA----RIEVTTGVLEAEAVLLNRYFFHYMKTKR 149


>gi|315504158|ref|YP_004083045.1| cmp/dcmp deaminase zinc-binding protein [Micromonospora sp. L5]
 gi|315410777|gb|ADU08894.1| CMP/dCMP deaminase zinc-binding protein [Micromonospora sp. L5]
          Length = 141

 Score =  110 bits (276), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 30/106 (28%), Positives = 47/106 (44%), Gaps = 1/106 (0%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRM 61
               F+  A+E A  A    E P  ++ V  +  ++    N     KDVTAH E+   R 
Sbjct: 4   DDEAFLRRAVELADRAGASGERPFASLLVGADGTVLIEDHNTVVSDKDVTAHPELKLARW 63

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKG 107
             R L+ E      +Y + +PC MC  AI+ + + R+ Y  S  + 
Sbjct: 64  AARQLAPEAAVATTMYTSCQPCPMCTVAINASGLGRVVYALSTEQF 109


>gi|205374673|ref|ZP_03227467.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           [Bacillus coahuilensis m4-4]
          Length = 377

 Score =  110 bits (276), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 36/151 (23%), Positives = 63/151 (41%), Gaps = 21/151 (13%)

Query: 2   KKGNVFMSCALEEAQ-NAALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
           +    +M+ A++ A+  +   +  P VGAV V + +I+    +          HAEI A+
Sbjct: 5   QSHEFYMNMAIQNAKVMSGQTSPNPLVGAVIVRDGEIVGFGAHMKAGE----PHAEIHAL 60

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENG 113
           RM              +YVTLEPC+       CA A+  A I  +     +P      NG
Sbjct: 61  RMAGDKA-----KGATIYVTLEPCSHYGRTGPCAVALIEAGITNVVVATLDPNPIVAGNG 115

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
            +    A      ++  G+ E  ++++ + F
Sbjct: 116 VRILEDAG----IKVITGVMEAEAKRMNEVF 142


>gi|257453179|ref|ZP_05618478.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Fusobacterium
           sp. 3_1_5R]
 gi|317059713|ref|ZP_07924198.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase
           [Fusobacterium sp. 3_1_5R]
 gi|313685389|gb|EFS22224.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase
           [Fusobacterium sp. 3_1_5R]
          Length = 359

 Score =  110 bits (276), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 43/152 (28%), Positives = 61/152 (40%), Gaps = 21/152 (13%)

Query: 3   KGNVFMSCALEEAQNAALR-NEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +   +M  ALE A++   R N  P VGAV V N KII +  +          HAE+ A++
Sbjct: 2   EDLEYMHLALELAKHGEGRVNPNPLVGAVVVKNGKIIGKGYHHEYGG----PHAEVFALQ 57

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
                   E      +YVTLEPC        CA  I  + I+R      +P       G 
Sbjct: 58  EAG-----EEAKGATIYVTLEPCSHYGKTPPCAKKIIDSGIKRCVISMGDPNPLVAGKGI 112

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
                A      E+  G+ E  +R + + F K
Sbjct: 113 SMMRDAG----IEVEIGLCETEARALNRVFLK 140


>gi|73748880|ref|YP_308119.1| riboflavin biosynthesis protein RibD [Dehalococcoides sp. CBDB1]
 gi|147669641|ref|YP_001214459.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase /
           diaminohydroxyphosphoribosylaminopyrimidine deaminase
           [Dehalococcoides sp. BAV1]
 gi|73660596|emb|CAI83203.1| riboflavin biosynthesis protein RibD [Dehalococcoides sp. CBDB1]
 gi|146270589|gb|ABQ17581.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase /
           diaminohydroxyphosphoribosylaminopyrimidine deaminase
           [Dehalococcoides sp. BAV1]
          Length = 365

 Score =  110 bits (276), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 38/151 (25%), Positives = 66/151 (43%), Gaps = 25/151 (16%)

Query: 6   VFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
            +MS AL  A+ A    ++   P VGAV V N +++ +   +     D   HAEI+A++ 
Sbjct: 2   KYMSQALSLAKLA--IGQVSPNPSVGAVIVKNGEVVGQGFTQP-PGGD---HAEIVALKQ 55

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
                         LYVTLEPC        C  ++  + I+ +Y    +        G +
Sbjct: 56  AAEKA-----KGATLYVTLEPCCHQGRTPPCTGSVIASGIKEVYIATLDDNPLVSGKGKK 110

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
               A      +++ G+ E+ +RQ+ + +FK
Sbjct: 111 ELEDAG----IKVHLGMMEREARQMNEAYFK 137


>gi|331088370|ref|ZP_08337289.1| riboflavin biosynthesis protein RibD [Lachnospiraceae bacterium
           3_1_46FAA]
 gi|330408614|gb|EGG88080.1| riboflavin biosynthesis protein RibD [Lachnospiraceae bacterium
           3_1_46FAA]
          Length = 375

 Score =  110 bits (276), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 39/151 (25%), Positives = 55/151 (36%), Gaps = 21/151 (13%)

Query: 3   KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
               +M  A++ A+      N  P VGAV V + KII    ++         HAE  AI 
Sbjct: 2   TDQEYMLRAIQLAKKGEGWTNPNPMVGAVIVKDGKIIGEGYHKKYGEL----HAERNAI- 56

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
                   E      +YVTLEPC        C  AI   +IR++  G+ +P       G 
Sbjct: 57  ----ASLTESAEGAVIYVTLEPCCHHGKTPPCTEAIIEQKIRKVVIGSRDPNPKVAGKGV 112

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
           Q    A       +      +   Q+   FF
Sbjct: 113 QMLREAG----VTVVEDFMREECDQLNPVFF 139


>gi|312883784|ref|ZP_07743503.1| riboflavin-specific deaminase [Vibrio caribbenthicus ATCC BAA-2122]
 gi|309368533|gb|EFP96066.1| riboflavin-specific deaminase [Vibrio caribbenthicus ATCC BAA-2122]
          Length = 365

 Score =  110 bits (275), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 38/155 (24%), Positives = 61/155 (39%), Gaps = 21/155 (13%)

Query: 3   KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           + +  MS AL+ A+         P VG V V +  ++    +          HAE+ A++
Sbjct: 5   EDHTHMSRALKLAELGKYTTAPNPRVGCVIVKDGLVVGEGFHYRAGE----PHAEVHALQ 60

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
                  +E      +YVTLEPC        CA A+  A++ R+     +P       G 
Sbjct: 61  AA-----KERAIGATVYVTLEPCSHYGRTPPCAEALIKAKVGRVVCAMQDPNTLVSGRGI 115

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
           Q    A      E+  G+ EQ +  + + F K  R
Sbjct: 116 QMLRSAG----IEVDVGLLEQDALDLNRAFIKTMR 146


>gi|238893351|ref|YP_002918085.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Klebsiella pneumoniae NTUH-K2044]
 gi|262042437|ref|ZP_06015597.1| riboflavin biosynthesis protein RibD [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
 gi|238545667|dbj|BAH62018.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/
           5-amino-6-(5-phosphoribosylamino) uracil reductase
           [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044]
 gi|259040212|gb|EEW41323.1| riboflavin biosynthesis protein RibD [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
          Length = 367

 Score =  110 bits (275), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 35/155 (22%), Positives = 56/155 (36%), Gaps = 21/155 (13%)

Query: 3   KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +  ++M+ AL+ A       +  P VG V V + +I+    +          HAE+ A+R
Sbjct: 2   QDEMYMARALKLAARGRFTTHPNPNVGCVIVKDGEIVGEGFHYRAGE----PHAEVHALR 57

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           M               YVTLEPC        C  A+  A + R+     +P       G 
Sbjct: 58  MAGEKA-----RGATAYVTLEPCSHHGRTPPCCDALIAAGVSRVVAAMQDPNPQVAGRGL 112

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
                A      E+  G+    +  + + F K  R
Sbjct: 113 YRLQQAG----IEVSHGLMMNEAEALNKGFLKRMR 143


>gi|229081368|ref|ZP_04213871.1| RibD (Riboflavin-specific deaminase) [Bacillus cereus Rock4-2]
 gi|228701990|gb|EEL54473.1| RibD (Riboflavin-specific deaminase) [Bacillus cereus Rock4-2]
          Length = 373

 Score =  110 bits (275), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 38/162 (23%), Positives = 65/162 (40%), Gaps = 26/162 (16%)

Query: 1   MKK--GNVFMSCALEEAQ-NAALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56
           MKK     +M  AL+ A+  +   +  P VGAV V +  I+    +     +    HAE+
Sbjct: 1   MKKMTDQEYMRIALQLAEGTSGQTSPNPMVGAVVVKDGNIVGMGAHLRAGEE----HAEV 56

Query: 57  LAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGI 110
            A++M  +        +  +YVTLEPC        C   +    ++R+     +      
Sbjct: 57  HALQMAGQ-----NAKDATVYVTLEPCSHFGKTPPCCELLIEKGVKRVVIATLDCNPLVS 111

Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF---KERR 149
            NG +    A      E+  G+ E  +  + + FF   K +R
Sbjct: 112 GNGKRRLEEA----RIEVTTGVLEAEAVLLNRYFFHYMKTKR 149


>gi|328952293|ref|YP_004369627.1| riboflavin biosynthesis protein RibD [Desulfobacca acetoxidans DSM
           11109]
 gi|328452617|gb|AEB08446.1| riboflavin biosynthesis protein RibD [Desulfobacca acetoxidans DSM
           11109]
          Length = 362

 Score =  110 bits (275), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 39/148 (26%), Positives = 55/148 (37%), Gaps = 21/148 (14%)

Query: 8   MSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M+ AL+ A            VGAV V +  I+ R  +R         HAE+ A+R     
Sbjct: 1   MALALKLAARGVGCTSPNPMVGAVVVRDGYIVGRGYHRRYGG----PHAEVEALRQAGSQ 56

Query: 66  LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
                     LYVTLEPC        C  AI  A IRR+    S+P       G  +   
Sbjct: 57  A-----DGATLYVTLEPCNHYGQTPPCTEAILAAGIRRVVIANSDPNPHVAGGGAAYLQS 111

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKE 147
                   +  G+  +   ++ + FFK 
Sbjct: 112 KGLL----VQSGLLAKAGSRLNEAFFKA 135


>gi|326335510|ref|ZP_08201697.1| riboflavin biosynthesis protein RibD [Capnocytophaga sp. oral taxon
           338 str. F0234]
 gi|325692276|gb|EGD34228.1| riboflavin biosynthesis protein RibD [Capnocytophaga sp. oral taxon
           338 str. F0234]
          Length = 360

 Score =  110 bits (275), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 43/161 (26%), Positives = 60/161 (37%), Gaps = 24/161 (14%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57
           M     +M   L  A+ A      P   VG+V V   KII    +          HAE+ 
Sbjct: 3   MIIDEKYMQRCLFLARKAMGYT-YPNPLVGSVIVHQGKIIGEGWHTKAGE----PHAEVN 57

Query: 58  AIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIE 111
           AI     +  + +L E  LYV LEPC        CA  I    I R+  G ++       
Sbjct: 58  AITS---VRDKSLLKESTLYVNLEPCVHFGKTPPCADLIIEKGIPRIVIGCTDIYSKVAG 114

Query: 112 NGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF---KERR 149
            G Q    A      E+   + EQ S+ +   FF    ++R
Sbjct: 115 KGIQRLQQAGR----EVVLDVLEQESQALNIRFFTFHSQKR 151


>gi|224370210|ref|YP_002604374.1| RibD [Desulfobacterium autotrophicum HRM2]
 gi|223692927|gb|ACN16210.1| RibD [Desulfobacterium autotrophicum HRM2]
          Length = 381

 Score =  110 bits (275), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 43/151 (28%), Positives = 60/151 (39%), Gaps = 21/151 (13%)

Query: 2   KKGNVFMSCALEEAQ--NAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
              N FM  A+  A+           VGAV V NN+++ +  +         AHAE+ AI
Sbjct: 15  TTHNSFMEQAICLAEQGRGYTAPNPMVGAVVVKNNQVVGQGWH----KGPGLAHAEVNAI 70

Query: 60  RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113
                +         DLYVTLEPC        C   I  A IRR++ G  +P       G
Sbjct: 71  DDAGDLA-----RGSDLYVTLEPCNHTGRTPPCTEKILRAGIRRVFVGTEDPNPFVAGGG 125

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
            +F           +  GI  + S  +I+DF
Sbjct: 126 IKFLKERG----VAVKVGICRRASETLIEDF 152


>gi|153814754|ref|ZP_01967422.1| hypothetical protein RUMTOR_00969 [Ruminococcus torques ATCC 27756]
 gi|145847785|gb|EDK24703.1| hypothetical protein RUMTOR_00969 [Ruminococcus torques ATCC 27756]
          Length = 395

 Score =  110 bits (275), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 39/151 (25%), Positives = 55/151 (36%), Gaps = 21/151 (13%)

Query: 3   KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
               +M  A++ A+      N  P VGAV V + KII    ++         HAE  AI 
Sbjct: 22  TDQEYMLRAIQLAKKGEGWTNPNPMVGAVIVKDGKIIGEGYHKKYGEL----HAERNAI- 76

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
                   E      +YVTLEPC        C  AI   +IR++  G+ +P       G 
Sbjct: 77  ----ASLTESAEGAVIYVTLEPCCHHGKTPPCTEAIIEQKIRKVVIGSRDPNPKVAGKGV 132

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
           Q    A       +      +   Q+   FF
Sbjct: 133 QMLREAG----VTVVEDFMREECDQLNPVFF 159


>gi|330006909|ref|ZP_08305781.1| riboflavin biosynthesis protein RibD [Klebsiella sp. MS 92-3]
 gi|328535663|gb|EGF62112.1| riboflavin biosynthesis protein RibD [Klebsiella sp. MS 92-3]
          Length = 367

 Score =  110 bits (275), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 35/155 (22%), Positives = 56/155 (36%), Gaps = 21/155 (13%)

Query: 3   KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +  ++M+ AL+ A       +  P VG V V + +I+    +          HAE+ A+R
Sbjct: 2   QDEMYMARALKLAARGRFTTHPNPNVGCVIVKDGEIVGEGFHYRAGE----PHAEVHALR 57

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           M               YVTLEPC        C  A+  A + R+     +P       G 
Sbjct: 58  MAGEKA-----RGATAYVTLEPCSHHGRTPPCCDALIAAGVSRVVAAMQDPNPQVAGRGL 112

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
                A      E+  G+    +  + + F K  R
Sbjct: 113 YRLQQAG----IEVSHGLMMNEAEALNKGFLKRMR 143


>gi|70732823|ref|YP_262590.1| riboflavin biosynthesis protein RibD [Pseudomonas fluorescens Pf-5]
 gi|68347122|gb|AAY94728.1| riboflavin biosynthesis protein RibD [Pseudomonas fluorescens Pf-5]
          Length = 377

 Score =  110 bits (275), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 37/152 (24%), Positives = 58/152 (38%), Gaps = 21/152 (13%)

Query: 4   GNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
              +M+ ALE A+      +  P VG V V + +++    +          HAE+ A+R 
Sbjct: 11  DAHYMARALELARKGRYSTHPNPRVGCVIVRDGQVVGEGWHVRAGE----PHAEVHALRA 66

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
              +           YVTLEPC        CA A+  A + R+     +P       G Q
Sbjct: 67  AGELA-----RGATAYVTLEPCSHHGRTPPCADALVNAGVARVVAAMQDPNPEVAGRGLQ 121

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
               A      + + G+ E  +R I + F K 
Sbjct: 122 RLAQAG----IDTHGGVLEGEARAINKGFLKR 149


>gi|237730390|ref|ZP_04560871.1| riboflavin bifunctional biosynthesis protein ribD [Citrobacter sp.
           30_2]
 gi|226905929|gb|EEH91847.1| riboflavin bifunctional biosynthesis protein ribD [Citrobacter sp.
           30_2]
          Length = 367

 Score =  110 bits (275), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 35/155 (22%), Positives = 56/155 (36%), Gaps = 21/155 (13%)

Query: 3   KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +  ++M+ AL+ A       +  P VG V V + +I+    +          HAE+ A+R
Sbjct: 2   QDELYMARALKLAARGRFTTHPNPNVGCVIVKDGEIVGEGYHHRAGE----PHAEVHALR 57

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           M               YVTLEPC        C  A+  A + R+     +P       G 
Sbjct: 58  MAGEKAQ-----GATAYVTLEPCSHHGRTPPCCDALIAAGVSRVVAAMQDPNPQVAGRGL 112

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
                A      ++  G+      Q+ + F K  R
Sbjct: 113 YRLQQAG----IDVSHGLMMSEVEQLNKGFLKRMR 143


>gi|145299654|ref|YP_001142495.1| cytidine/deoxycytidylate deaminase [Aeromonas salmonicida subsp.
           salmonicida A449]
 gi|142852426|gb|ABO90747.1| cytidine/deoxycytidylate deaminase [Aeromonas salmonicida subsp.
           salmonicida A449]
          Length = 172

 Score =  110 bits (275), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 29/110 (26%), Positives = 47/110 (42%), Gaps = 3/110 (2%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
               ++  AL+ A     R   P  A+ V N+++++ A N      D T HAE+ A+R  
Sbjct: 22  SHQEWLEQALQLALQNRQRGGRPFAALLVQNDRLVAGAVNAMHLEGDPTRHAELEALRQA 81

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN 112
            +      L    +Y +  PC MC +A+ +  IR +YY   N        
Sbjct: 82  SQSGP---LAGAIIYASGHPCPMCLSALVMNGIRAVYYAFDNHDAAPFGF 128


>gi|315125800|ref|YP_004067803.1| riboflavin biosynthesis protein [Pseudoalteromonas sp. SM9913]
 gi|315014314|gb|ADT67652.1| riboflavin biosynthesis protein [Pseudoalteromonas sp. SM9913]
          Length = 375

 Score =  110 bits (275), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 40/155 (25%), Positives = 60/155 (38%), Gaps = 23/155 (14%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           +    +M+ A+E A+        P   VG V V NNKII    +R         HAE+ A
Sbjct: 9   EDDKRYMARAIELAKKGRFTT-TPNPNVGCVLVKNNKIIGEGFHRLAGQG----HAEVNA 63

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
           + M       E       YVTLEPC        CA  +  A ++++     +        
Sbjct: 64  LTMAG-----ENAKGATAYVTLEPCSHYGRTPPCAEGLKAAGVKKVIAAMVDSNPQVAGK 118

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
           G +    A      E+  G+ E ++R +   FFK 
Sbjct: 119 GLKILADAG----IEVAYGLLEAQARALNFGFFKR 149


>gi|304383732|ref|ZP_07366191.1| riboflavin biosynthesis protein RibD [Prevotella marshii DSM 16973]
 gi|304335256|gb|EFM01527.1| riboflavin biosynthesis protein RibD [Prevotella marshii DSM 16973]
          Length = 315

 Score =  110 bits (275), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 37/151 (24%), Positives = 55/151 (36%), Gaps = 17/151 (11%)

Query: 2   KKGNVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
                +M   L+ A+           VGAV V+ N+II    +         AHAE+ A 
Sbjct: 5   TTDEKYMRRCLQLAECGRENAKPNPMVGAVIVVENRIIGEGYHVRYGE----AHAEVNAF 60

Query: 60  RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113
              C   +  +LP   LYV+LEPC        C   I    + R+  G  +P       G
Sbjct: 61  ASICPKDAA-LLPSATLYVSLEPCAHQGKTPPCTRLIIEKGVGRVVVGCIDPFAKVQGRG 119

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
            +    A      E+  G+ E     + + F
Sbjct: 120 IRMLQEAG----IEVTLGVLEAECLALNRRF 146


>gi|300769800|ref|ZP_07079680.1| riboflavin biosynthesis protein RibD [Sphingobacterium spiritivorum
           ATCC 33861]
 gi|300763251|gb|EFK60067.1| riboflavin biosynthesis protein RibD [Sphingobacterium spiritivorum
           ATCC 33861]
          Length = 350

 Score =  110 bits (275), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 44/162 (27%), Positives = 61/162 (37%), Gaps = 23/162 (14%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56
           M     +M   LE A   A    +   P VGAV V  NKII               HAE+
Sbjct: 1   MNMQERYMQRCLELALLGA--GTVSPNPMVGAVIVHENKIIGEGYTSPYGG----PHAEV 54

Query: 57  LAIRMGCRILS---QEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKG 107
            AI+            +L E D+YV+LEPC        CA  I    +R++Y    +P  
Sbjct: 55  NAIQQVKDQYPDSADRLLEESDMYVSLEPCAHFGKTPPCANLIVKHNLRKVYIACMDPFA 114

Query: 108 GGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
                G      A      E+  G+ E+ +  + + FF   R
Sbjct: 115 QVNGKGLGILQEAG----IEVEVGLLEKEALWLNRRFFTRVR 152


>gi|295108673|emb|CBL22626.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase
           /5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Ruminococcus obeum A2-162]
          Length = 375

 Score =  110 bits (275), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 39/151 (25%), Positives = 55/151 (36%), Gaps = 21/151 (13%)

Query: 3   KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
               +M  A++ A+      N  P VGAV V + KII    ++         HAE  AI 
Sbjct: 2   TDQEYMLRAIQLAKKGEGWTNPNPMVGAVIVKDGKIIGEGYHKKYGEL----HAERNAI- 56

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
                   E      +YVTLEPC        C  AI   +IR++  G+ +P       G 
Sbjct: 57  ----ASLTESAEGAVIYVTLEPCCHHGKTPPCTEAIIEQKIRKVVIGSRDPNPKVAGKGV 112

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
           Q    A       +      +   Q+   FF
Sbjct: 113 QMLREAG----VTVVEDFMREECDQLNPVFF 139


>gi|153811505|ref|ZP_01964173.1| hypothetical protein RUMOBE_01897 [Ruminococcus obeum ATCC 29174]
 gi|317501334|ref|ZP_07959537.1| riboflavin biosynthesis protein RibD [Lachnospiraceae bacterium
           8_1_57FAA]
 gi|149832246|gb|EDM87331.1| hypothetical protein RUMOBE_01897 [Ruminococcus obeum ATCC 29174]
 gi|316897298|gb|EFV19366.1| riboflavin biosynthesis protein RibD [Lachnospiraceae bacterium
           8_1_57FAA]
          Length = 395

 Score =  110 bits (275), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 39/151 (25%), Positives = 55/151 (36%), Gaps = 21/151 (13%)

Query: 3   KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
               +M  A++ A+      N  P VGAV V + KII    ++         HAE  AI 
Sbjct: 22  TDQEYMLRAIQLAKKGEGWTNPNPMVGAVIVKDGKIIGEGYHKKYGEL----HAERNAI- 76

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
                   E      +YVTLEPC        C  AI   +IR++  G+ +P       G 
Sbjct: 77  ----ASLTESAEGAVIYVTLEPCCHHGKTPPCTEAIIEQKIRKVVIGSRDPNPKVAGKGV 132

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
           Q    A       +      +   Q+   FF
Sbjct: 133 QMLREAG----VTVVEDFMREECDQLNPVFF 159


>gi|237809265|ref|YP_002893705.1| riboflavin biosynthesis protein RibD [Tolumonas auensis DSM 9187]
 gi|237501526|gb|ACQ94119.1| riboflavin biosynthesis protein RibD [Tolumonas auensis DSM 9187]
          Length = 370

 Score =  110 bits (275), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 37/155 (23%), Positives = 60/155 (38%), Gaps = 21/155 (13%)

Query: 3   KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           + +++MS AL+ A+      +  P VG V V + +I+    +          HAE+ A+R
Sbjct: 5   EDHLYMSRALQLAEQGRFTTSPNPNVGCVIVADGRIVGEGFHLRAGE----PHAEVHALR 60

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           M               YVTLEPC        CA A+  A + R+     +P       G 
Sbjct: 61  MAGDKA-----RGATAYVTLEPCSHFGRTPPCADALVNAGVARVVAAMEDPNPQVSGRGM 115

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
           +    A       I  G+ + ++  +   F K  R
Sbjct: 116 RRLADAG----VTIQTGLLQAQAEALNPGFIKRMR 146


>gi|253989703|ref|YP_003041059.1| hypothetical protein PAU_02223 [Photorhabdus asymbiotica subsp.
           asymbiotica ATCC 43949]
 gi|253781153|emb|CAQ84315.1| conserved hypothetical protein [Photorhabdus asymbiotica]
          Length = 193

 Score =  110 bits (275), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 42/158 (26%), Positives = 67/158 (42%), Gaps = 18/158 (11%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILA 58
           + K   +M  A+EEA+ +A     P GAV V   + +I+SR  N    +K+   H EI A
Sbjct: 42  IAKHEKYMREAIEEAKKSAK---YPFGAVIVNRSSGEILSRGVNS--WVKNPILHGEIQA 96

Query: 59  IRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIE-NGTQFY 117
           I     +   +    V LY T EPC+MC +A++   IR + +G S      +        
Sbjct: 97  INHYVTLYGNQGWNNVALYTTAEPCSMCMSALAWTGIREVIWGTSISGLRNVGIRQIDIS 156

Query: 118 TLA------TCHHSPEIYPGISEQRSRQIIQDFFKERR 149
                    + +    +  GI    + ++    F ERR
Sbjct: 157 AQEIAERASSFYSPISLVGGILANETDKL----FSERR 190


>gi|302307191|ref|NP_983768.2| ADL328Cp [Ashbya gossypii ATCC 10895]
 gi|299788881|gb|AAS51592.2| ADL328Cp [Ashbya gossypii ATCC 10895]
          Length = 151

 Score =  110 bits (275), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 35/144 (24%), Positives = 54/144 (37%), Gaps = 14/144 (9%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVL--NNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M  A +EA        +P+G   +   +  ++ R  N   +    T H E  A+    R 
Sbjct: 9   MEIAYQEALQGYAEGGVPIGGCLIDQTDGTVLGRGRNMRFQRASATLHGETAALENAGR- 67

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           L   +     LY TL PC MCA A+ L  I R   G ++   G   +             
Sbjct: 68  LPGHVYKHCTLYTTLSPCDMCAGAVLLYGIPRCVVGENDTFLGAEAHLRA--------RG 119

Query: 126 PEIYPGISEQ-RSRQIIQDFFKER 148
            E+   + +  R R ++Q F   R
Sbjct: 120 VEVA--VLQDARCRALMQQFVAAR 141


>gi|258415855|ref|ZP_05682126.1| riboflavin specific deaminase [Staphylococcus aureus A9763]
 gi|257839448|gb|EEV63921.1| riboflavin specific deaminase [Staphylococcus aureus A9763]
          Length = 347

 Score =  110 bits (275), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 38/153 (24%), Positives = 64/153 (41%), Gaps = 26/153 (16%)

Query: 5   NVFMSCALEEAQNAALRNEI--PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
           + FM  A++ A     +  +  PVGAV V   +I+    +  +  K    HAE+ A+ M 
Sbjct: 2   SQFMDYAIQLANMVQGQTGVNPPVGAVVVNEGRIVGIGAHLRKGDK----HAEVQALDMA 57

Query: 63  CRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116
                Q+      +Y+TLEPC        C   I   +I ++ Y   +       N    
Sbjct: 58  -----QQNAEGATIYITLEPCSHFGSTPPCVNKIIDCKIAKVVYATKD-------NSLDT 105

Query: 117 YTLATCH-HSPEIYPGISEQRSRQIIQDFFKER 148
           +       H  E+   + ++R+ Q+ QDFFK +
Sbjct: 106 HGDEALRAHGIEVEC-VDDERASQLYQDFFKAK 137


>gi|251796359|ref|YP_003011090.1| riboflavin biosynthesis protein RibD [Paenibacillus sp. JDR-2]
 gi|247543985|gb|ACT01004.1| riboflavin biosynthesis protein RibD [Paenibacillus sp. JDR-2]
          Length = 368

 Score =  110 bits (275), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 42/150 (28%), Positives = 64/150 (42%), Gaps = 21/150 (14%)

Query: 3   KGNVFMSCALEEAQNAALRNEI-PV-GAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
             + +MS ALE A  A+ +  I PV G V V + +II    +    LK  T HAE+ A++
Sbjct: 5   NDSYYMSLALELAAKASGQTGINPVVGCVVVKDGRIIGVGTH----LKRGTGHAEVHALQ 60

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           M       +      +YVTLEPC        C   I  A+  R+    ++P       G 
Sbjct: 61  MAG-----DEAEGATVYVTLEPCSHYGKTPPCCERIINAKAARVVVATTDPNPQVAGRGI 115

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
                       E+  G+ E++SR + + F
Sbjct: 116 ARLREEG----IEVEVGLLEEQSRSMNEKF 141


>gi|302751598|gb|ADL65775.1| bifunctional pyrimidine reductase / riboflavin biosynthesis protein
           [Staphylococcus aureus subsp. aureus str. JKD6008]
          Length = 343

 Score =  110 bits (275), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 38/150 (25%), Positives = 63/150 (42%), Gaps = 26/150 (17%)

Query: 8   MSCALEEAQNAALRNEI--PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M  A++ A     +  +  PVGAV V   +I+    +  +  K    HAE+ A+ M    
Sbjct: 1   MDYAIQLANMVQGQTGVNPPVGAVIVKEGRIVGIGAHLRKGDK----HAEVQALDMA--- 53

Query: 66  LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
             Q+      +Y+TLEPC        C   I   +I ++ Y   +       N    +  
Sbjct: 54  --QQNAEGATIYITLEPCSHFGSTPPCVNKIIDCKIAKVVYATKD-------NSLDTHGD 104

Query: 120 ATCH-HSPEIYPGISEQRSRQIIQDFFKER 148
            T   H  E+   + ++R+ Q+ QDFFK +
Sbjct: 105 ETLRAHGIEVEC-VDDERASQLYQDFFKAK 133


>gi|297538271|ref|YP_003674040.1| riboflavin biosynthesis protein RibD [Methylotenera sp. 301]
 gi|297257618|gb|ADI29463.1| riboflavin biosynthesis protein RibD [Methylotenera sp. 301]
          Length = 370

 Score =  110 bits (275), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 38/152 (25%), Positives = 59/152 (38%), Gaps = 21/152 (13%)

Query: 4   GNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
            + +M+ AL  A+      +    VG V V NN+I+ +  +          HAE+ A+R 
Sbjct: 6   DHTYMTLALRLAERGLYTTQPNPRVGCVIVKNNQIVGQGAHLKAGE----PHAEVFALRE 61

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
                        D YVTLEPC        C  A+  AR++R+     +P      NG +
Sbjct: 62  AGA-----NAEGADAYVTLEPCNHHGRTPPCVDALINARVKRVVVAMQDPNPLVAGNGIK 116

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
                   H  E+  G+ E  S+ +   F   
Sbjct: 117 RLQA----HGIEVEVGLMEAESKSLNLGFISR 144


>gi|330877574|gb|EGH11723.1| riboflavin biosynthesis protein RibD [Pseudomonas syringae pv.
           morsprunorum str. M302280PT]
          Length = 378

 Score =  110 bits (275), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 35/152 (23%), Positives = 56/152 (36%), Gaps = 21/152 (13%)

Query: 4   GNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
              +M+ ALE A+           VG V V + +I+ +  +          HAE+ A+R 
Sbjct: 9   DVHYMAHALELARKGLYSTHPNPRVGCVIVRDGQIVGQGWHARAGE----PHAEVHALRE 64

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
              +           YVTLEPC        CA A+  A + R+     +P      +G  
Sbjct: 65  AGELA-----RGATAYVTLEPCSHQGRTPPCADALISAGLGRVVAAMQDPNPQVAGSGLL 119

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
               A       +  G+ E  +R + + F K 
Sbjct: 120 RLMTAG----ISVQCGVLESEARALNKGFIKR 147


>gi|113461193|ref|YP_719262.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Haemophilus somnus 129PT]
 gi|112823236|gb|ABI25325.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Haemophilus
           somnus 129PT]
          Length = 376

 Score =  110 bits (275), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 37/155 (23%), Positives = 58/155 (37%), Gaps = 21/155 (13%)

Query: 3   KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +   FM  ALE A+         P VG V V N +I+ R  +   +      HAE++A+R
Sbjct: 8   QDEYFMQIALELAKKGIFTTTPNPAVGCVLVKNGEIVGRGFH--FKAGQP--HAEVMALR 63

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
                   +       YVTLEPC        CA  +  A IR +     +P       G 
Sbjct: 64  DAG-----DRAKGATAYVTLEPCSHFGRTPPCAQGLIEAGIRNVIVAMKDPNPQVAGKGL 118

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
                A    +     G+ ++++  + + F    R
Sbjct: 119 AMLQAAGIESAV----GLLQEKAELLNKGFLTRMR 149


>gi|28897453|ref|NP_797058.1| riboflavin-specific deaminase [Vibrio parahaemolyticus RIMD
           2210633]
 gi|260366283|ref|ZP_05778739.1| riboflavin biosynthesis protein RibD [Vibrio parahaemolyticus
           K5030]
 gi|260876413|ref|ZP_05888768.1| riboflavin biosynthesis protein RibD [Vibrio parahaemolyticus
           AN-5034]
 gi|260898684|ref|ZP_05907180.1| riboflavin biosynthesis protein RibD [Vibrio parahaemolyticus
           Peru-466]
 gi|28805665|dbj|BAC58942.1| riboflavin-specific deaminase [Vibrio parahaemolyticus RIMD
           2210633]
 gi|308086936|gb|EFO36631.1| riboflavin biosynthesis protein RibD [Vibrio parahaemolyticus
           Peru-466]
 gi|308092982|gb|EFO42677.1| riboflavin biosynthesis protein RibD [Vibrio parahaemolyticus
           AN-5034]
 gi|308112701|gb|EFO50241.1| riboflavin biosynthesis protein RibD [Vibrio parahaemolyticus
           K5030]
          Length = 374

 Score =  110 bits (275), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 38/152 (25%), Positives = 56/152 (36%), Gaps = 21/152 (13%)

Query: 3   KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +    MS AL+ A+         P VG V V +  II    +          HAE+ A+R
Sbjct: 13  QDFSMMSRALKLARRGIYTTAPNPNVGCVIVRDGVIIGEGYHHRAGE----PHAEVYAMR 68

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           M               YVTLEPC        CA  +  A++ R+     +P       G 
Sbjct: 69  MAGDKA-----EGATAYVTLEPCSHYGRTPPCAEGLIKAKVARVVCAMEDPNPKVAGRGI 123

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
           Q    A      E+  G+ E  + ++ + F K
Sbjct: 124 QMLREAG----VEVQVGLLENDAIELNRGFIK 151


>gi|104779848|ref|YP_606346.1| riboflavin biosynthesis protein RibD [Pseudomonas entomophila L48]
 gi|95108835|emb|CAK13531.1| Riboflavin biosynthesis protein RibD [Pseudomonas entomophila L48]
          Length = 375

 Score =  110 bits (275), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 35/152 (23%), Positives = 56/152 (36%), Gaps = 21/152 (13%)

Query: 4   GNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
              +M+ A+E A+           VG V V + +++    +          HAE+ A+R 
Sbjct: 8   DAHYMARAVELARKGLYTTHPNPRVGCVIVRDGEVVGEGWHVRAGE----PHAEVHALRQ 63

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
              +           YVTLEPC        CA A+  A + R+     +P      NG +
Sbjct: 64  AGELA-----RGACAYVTLEPCSHHGRTPPCAEALVKAGVARVVAAMQDPNPQVAGNGLR 118

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
               A      E+  G+ E  +R +   F K 
Sbjct: 119 RLREAG----IEVASGVLEAEARALNPGFLKR 146


>gi|226355049|ref|YP_002784789.1| riboflavin biosynthesis protein [Deinococcus deserti VCD115]
 gi|226317039|gb|ACO45035.1| putative Riboflavin biosynthesis protein ribD [Deinococcus deserti
           VCD115]
          Length = 368

 Score =  110 bits (275), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 36/142 (25%), Positives = 54/142 (38%), Gaps = 21/142 (14%)

Query: 4   GNVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
              +M  AL EA     R     PVG V V + +++ R  +          HAE+ A+R 
Sbjct: 8   DTEYMRLALNEAARGMGRTSPNPPVGCVIVRDGQVVGRGFHPRAGE----PHAEVFALRE 63

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
                  E       YVTLEPC        CA A+  A + ++   A +P       G  
Sbjct: 64  AG-----EYARGATAYVTLEPCSHFGRTPPCADALVAAGVSQVVIAALDPNPRVGGQGAS 118

Query: 116 FYTLATCHHSPEIYPGISEQRS 137
               A      E+  G++E+ +
Sbjct: 119 RLREAG----IEVIVGVAEEEA 136


>gi|238918989|ref|YP_002932503.1| riboflavin biosynthesis protein RibD, [Edwardsiella ictaluri
           93-146]
 gi|238868557|gb|ACR68268.1| riboflavin biosynthesis protein RibD, putative [Edwardsiella
           ictaluri 93-146]
          Length = 373

 Score =  109 bits (274), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 38/155 (24%), Positives = 56/155 (36%), Gaps = 21/155 (13%)

Query: 3   KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
               +M+ A E A+         P VG V V +++I+    +          HAE+LA+R
Sbjct: 8   SDEFYMARAFELARRGRFTTTPNPNVGCVLVRDDRIVGEGFHLRAGE----PHAEVLALR 63

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           M       E       YVTLEPC        CA A+  A + R+     +P       G 
Sbjct: 64  MAG-----EQARGATAYVTLEPCSHHGRTPPCADALVAAGVSRVVAAMQDPNPHVAGRGL 118

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
                A       +  G+    +  I + F K  R
Sbjct: 119 YRLQQAG----IAVQHGLMLAEAEAINKGFLKRMR 149


>gi|260899221|ref|ZP_05907616.1| riboflavin biosynthesis protein RibD [Vibrio parahaemolyticus
           AQ4037]
 gi|308106651|gb|EFO44191.1| riboflavin biosynthesis protein RibD [Vibrio parahaemolyticus
           AQ4037]
          Length = 374

 Score =  109 bits (274), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 38/152 (25%), Positives = 56/152 (36%), Gaps = 21/152 (13%)

Query: 3   KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +    MS AL+ A+         P VG V V +  II    +          HAE+ A+R
Sbjct: 13  QDFSMMSRALKLARRGIYTTAPNPNVGCVIVRDGVIIGEGYHHRAGE----PHAEVYAMR 68

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           M               YVTLEPC        CA  +  A++ R+     +P       G 
Sbjct: 69  MAGDKA-----EGATAYVTLEPCSHYGRTPPCAEGLIKAKVARVVCAMEDPNPKVAGRGI 123

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
           Q    A      E+  G+ E  + ++ + F K
Sbjct: 124 QMLREAG----VEVQVGLLENDAIELNRGFIK 151


>gi|328472537|gb|EGF43400.1| riboflavin-specific deaminase [Vibrio parahaemolyticus 10329]
          Length = 374

 Score =  109 bits (274), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 38/152 (25%), Positives = 56/152 (36%), Gaps = 21/152 (13%)

Query: 3   KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +    MS AL+ A+         P VG V V +  II    +          HAE+ A+R
Sbjct: 13  QDFSMMSRALKLARRGIYTTAPNPNVGCVIVRDGVIIGEGYHHRAGE----PHAEVHAMR 68

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           M               YVTLEPC        CA  +  A++ R+     +P       G 
Sbjct: 69  MAGDKA-----EGATAYVTLEPCSHYGRTPPCAEGLIKAKVARVVCAMEDPNPKVAGRGI 123

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
           Q    A      E+  G+ E  + ++ + F K
Sbjct: 124 QMLREAG----VEVQVGLLENDAIELNRGFIK 151


>gi|227537349|ref|ZP_03967398.1| possible diaminohydroxyphosphoribosylaminopyrimidine deaminase
           [Sphingobacterium spiritivorum ATCC 33300]
 gi|227242852|gb|EEI92867.1| possible diaminohydroxyphosphoribosylaminopyrimidine deaminase
           [Sphingobacterium spiritivorum ATCC 33300]
          Length = 350

 Score =  109 bits (274), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 44/162 (27%), Positives = 61/162 (37%), Gaps = 23/162 (14%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56
           M     +M   LE A   A    +   P VGAV V  NKII               HAE+
Sbjct: 1   MNMQERYMQRCLELALLGA--GTVSPNPMVGAVIVHENKIIGEGYTSPYGG----PHAEV 54

Query: 57  LAIRMGCRILS---QEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKG 107
            AI+            +L E D+YV+LEPC        CA  I    +R++Y    +P  
Sbjct: 55  NAIQQVKDQYPDSADRLLAESDMYVSLEPCAHFGKTPPCANLIVKHNLRKVYIACMDPFA 114

Query: 108 GGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
                G      A      E+  G+ E+ +  + + FF   R
Sbjct: 115 QVNGKGLGILQQAG----IEVEVGLLEKEALWLNRRFFTRVR 152


>gi|119472108|ref|ZP_01614339.1| Riboflavin biosynthesis protein [Alteromonadales bacterium TW-7]
 gi|119445128|gb|EAW26421.1| Riboflavin biosynthesis protein [Alteromonadales bacterium TW-7]
          Length = 383

 Score =  109 bits (274), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 37/155 (23%), Positives = 61/155 (39%), Gaps = 23/155 (14%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           +   ++M+ A+E A+        P   VG V V +N+II    ++         HAE+ A
Sbjct: 9   EHDKLYMARAIELAKKGRFTT-TPNPNVGCVLVKDNQIIGEGFHQLAGQG----HAEVNA 63

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
           + +               YVTLEPC        CA  +  A I+++     +        
Sbjct: 64  LAVAGEKAQ-----GATAYVTLEPCSHYGRTPPCAEGLKAAGIKKVIAAMVDTNPQVAGK 118

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
           G +  + A      E+  G+ EQ +R +   FFK 
Sbjct: 119 GLKILSDAG----IEVAHGLLEQEARALNFGFFKR 149


>gi|332141886|ref|YP_004427624.1| Riboflavin biosynthesis protein RibD [Alteromonas macleodii str.
           'Deep ecotype']
 gi|327551908|gb|AEA98626.1| Riboflavin biosynthesis protein RibD [Alteromonas macleodii str.
           'Deep ecotype']
          Length = 379

 Score =  109 bits (274), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 35/155 (22%), Positives = 60/155 (38%), Gaps = 18/155 (11%)

Query: 2   KKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNN-KIISRAGNRNRELKDVTAHAEILA 58
           K    +M+ A++ A       +  P VG V V  + +++ +  +    ++  T HAE+ A
Sbjct: 7   KNDYYWMAKAIQLANKGRFTTSPNPRVGCVIVDEDSQLLGQGYH----IQAGTPHAEVHA 62

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
           +R        E       YVTLEPC        CA A+  A++ R+    ++P      N
Sbjct: 63  LRQAAHAR-SEGAKGATAYVTLEPCSHFGRTPPCAKALVEAQVARVVIAMTDPNPNVCGN 121

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
           G      A      E+   +    +  +   F K 
Sbjct: 122 GISMLQEAG----IEVVSEVMAAEAAALNPGFIKR 152


>gi|29830136|ref|NP_824770.1| hypothetical protein SAV_3593 [Streptomyces avermitilis MA-4680]
 gi|29607246|dbj|BAC71305.1| hypothetical protein [Streptomyces avermitilis MA-4680]
          Length = 151

 Score =  109 bits (274), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 41/148 (27%), Positives = 65/148 (43%), Gaps = 13/148 (8%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M   L  A+ AA      +GAV +   ++I ++G++  +  D T H EI AIR     L 
Sbjct: 1   MEECLCLAREAATTGNYALGAVVIKGGQVIGKSGSKLVQGNDPTGHPEITAIRQAAERLG 60

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS--NPKGGGIENGTQFYTLATCH-- 123
              LP+  L  TLEPC MC +A   A++R + YGA+  +      E+  Q YT       
Sbjct: 61  SRYLPDAYLVTTLEPCPMCTSAAIWAKMRGIAYGATQIDAVTWSQEHPDQKYTWRQIRMR 120

Query: 124 ---------HSPEIYPGISEQRSRQIIQ 142
                     S E++  +  +   ++  
Sbjct: 121 ARDVIRAGTPSLELHEEVRREECAKLFT 148


>gi|238897276|ref|YP_002922953.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase
           (N-terminal); 5-amino-6-(5-phosphoribosylamino) uracil
           reductase (C-terminal) [Candidatus Hamiltonella defensa
           5AT (Acyrthosiphon pisum)]
 gi|229465031|gb|ACQ66805.1| bifunctional: diaminohydroxyphosphoribosylaminopyrimidine deaminase
           (N-terminal); 5-amino-6-(5-phosphoribosylamino) uracil
           reductase (C-terminal) [Candidatus Hamiltonella defensa
           5AT (Acyrthosiphon pisum)]
          Length = 392

 Score =  109 bits (274), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 36/156 (23%), Positives = 55/156 (35%), Gaps = 23/156 (14%)

Query: 3   KGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
           +   +MS AL  A         P   VG V V + +++    +          HAEI A+
Sbjct: 13  QDEFYMSYALRLASLGRFTT-TPNPNVGCVLVRHGQVVGEGYHLRLGE----PHAEIHAL 67

Query: 60  RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113
           +   R+           Y+TLEPC        C  A+  A +RR+     +P       G
Sbjct: 68  QKAGRLA-----KGSVAYITLEPCCHYGKTPPCVEALIKAGVRRVVVAIEDPNPEIAGRG 122

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
                 A      E+  GI    ++ +   F K  R
Sbjct: 123 LYQLKQAG----IEVTSGILSTEAQDLNPGFLKRMR 154


>gi|188994131|ref|YP_001928383.1| putative riboflavin biosynthesis protein [Porphyromonas gingivalis
           ATCC 33277]
 gi|188593811|dbj|BAG32786.1| putative riboflavin biosynthesis protein [Porphyromonas gingivalis
           ATCC 33277]
          Length = 330

 Score =  109 bits (274), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 39/157 (24%), Positives = 64/157 (40%), Gaps = 19/157 (12%)

Query: 1   MKKGNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           M    ++M  A+E AQNA         VGAV V + +II    +    +     HAE++A
Sbjct: 1   MTPDPLYMRRAIELAQNAEGFTSPNPLVGAVLVAHGRIIGEGYHHCAGM----PHAEVIA 56

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
           I     +  + +L E  LYV+LEPC        CA  I    I  +     +P       
Sbjct: 57  INS---VRDRALLRESTLYVSLEPCSHYGKTPPCAELILREGIPHVVVAMLDPFPSVSGR 113

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
           G +    A+      +  G+  + + ++ + F   +R
Sbjct: 114 GIKMLRDAS----VSVQVGLLAEEAEELNRHFLTAQR 146


>gi|323439574|gb|EGA97294.1| riboflavin specific deaminase [Staphylococcus aureus O11]
 gi|323442021|gb|EGA99657.1| riboflavin specific deaminase [Staphylococcus aureus O46]
          Length = 343

 Score =  109 bits (274), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 38/150 (25%), Positives = 63/150 (42%), Gaps = 26/150 (17%)

Query: 8   MSCALEEAQNAALRNEI--PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M  A++ A     +  +  PVGAV V   +I+    +  +  K    HAE+ A+ M    
Sbjct: 1   MDYAIQLANMVQGQTGVNPPVGAVVVKEGRIVGIGAHLRKGDK----HAEVQALDMA--- 53

Query: 66  LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
             Q+      +Y+TLEPC        C   I   +I ++ Y   +       N    +  
Sbjct: 54  --QQNAEGATIYITLEPCSHFGSTPPCVNKIIDCKIAKVVYATKD-------NSLDTHGD 104

Query: 120 ATC-HHSPEIYPGISEQRSRQIIQDFFKER 148
            T   H  E+   + ++R+ Q+ QDFFK +
Sbjct: 105 ETLRDHGIEVEC-VDDERASQLYQDFFKAK 133


>gi|322420507|ref|YP_004199730.1| riboflavin biosynthesis protein RibD [Geobacter sp. M18]
 gi|320126894|gb|ADW14454.1| riboflavin biosynthesis protein RibD [Geobacter sp. M18]
          Length = 374

 Score =  109 bits (274), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 39/150 (26%), Positives = 60/150 (40%), Gaps = 21/150 (14%)

Query: 3   KGNVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
                M  AL EA+    +      VG V V + +++ +  +     K  T HAE+ A+R
Sbjct: 4   DHLKMMRLALSEARKGVGKTAPNPAVGCVIVRDGEVVGKGWH----KKAGTPHAEVHALR 59

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
               +         D YVTLEPC        CA A+  AR+ R++    +P       G 
Sbjct: 60  AAGELA-----AGADAYVTLEPCSHFGKTPPCARALIEARVGRVFVAMVDPNPLVSGRGI 114

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
           +    A      E+  G+ E  S +I + F
Sbjct: 115 KMLQDAG----IEVEVGLLEAESLEINRPF 140


>gi|298695036|gb|ADI98258.1| riboflavin specific deaminase [Staphylococcus aureus subsp. aureus
           ED133]
          Length = 343

 Score =  109 bits (274), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 38/150 (25%), Positives = 63/150 (42%), Gaps = 26/150 (17%)

Query: 8   MSCALEEAQNAALRNEI--PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M  A++ A     +  +  PVGAV V   +I+    +  +  K    HAE+ A+ M    
Sbjct: 1   MDYAIQLANMVQGQTGVNPPVGAVVVKEGRIVGIGAHLRKGDK----HAEVQALDMA--- 53

Query: 66  LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
             Q+      +Y+TLEPC        C   I   +I ++ Y   +       N    +  
Sbjct: 54  --QQNAEGATIYITLEPCSHFGLTPPCVNKIIDCKIAKVVYATKD-------NSLDTHGD 104

Query: 120 ATC-HHSPEIYPGISEQRSRQIIQDFFKER 148
            T   H  E+   + ++R+ Q+ QDFFK +
Sbjct: 105 DTLRDHGIEVEC-VDDERASQLYQDFFKAK 133


>gi|268592074|ref|ZP_06126295.1| riboflavin biosynthesis protein RibD [Providencia rettgeri DSM
           1131]
 gi|291312469|gb|EFE52922.1| riboflavin biosynthesis protein RibD [Providencia rettgeri DSM
           1131]
          Length = 371

 Score =  109 bits (274), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 36/157 (22%), Positives = 58/157 (36%), Gaps = 21/157 (13%)

Query: 1   MKKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           +++ N++M+ A E A+      +  P VG V V +  I+    ++         HAE+ A
Sbjct: 2   IEQDNMYMARAFELARKGRFTTSPNPNVGCVIVRDGTIVGEGYHQKAGE----PHAEVHA 57

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
           +RM               YVTLEPC        CA A+  A + R+     +P       
Sbjct: 58  LRMAGDKAQ-----GATAYVTLEPCSHHGRTPPCAEALIKAGVSRVVAAMQDPNPQVAGR 112

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
           G    + A      E    +    +    + F K  R
Sbjct: 113 GLYMLSQAG----IETRSNVLLNDAEAANRGFLKRMR 145


>gi|152996717|ref|YP_001341552.1| zinc-binding CMP/dCMP deaminase [Marinomonas sp. MWYL1]
 gi|150837641|gb|ABR71617.1| CMP/dCMP deaminase zinc-binding [Marinomonas sp. MWYL1]
          Length = 158

 Score =  109 bits (274), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 31/155 (20%), Positives = 56/155 (36%), Gaps = 22/155 (14%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIR 60
            K   F+  +   A+ A  +   P  A+ V + + ++    N      D+T HAE   + 
Sbjct: 5   TKDTEFLRQSFALAEEAKQQGIHPFAAILVDDEDNVLMTQVNGYLPDFDMTGHAERKLMT 64

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              +    + L +  +YV+ EPC MCA +   A + RL YG S        +  Q     
Sbjct: 65  RASKAYRPDFLAKCTMYVSAEPCAMCAGSAYWAGLGRLVYGLSED------SLKQITGNH 118

Query: 121 TCHH---------------SPEIYPGISEQRSRQI 140
             +                  E+     E+ + ++
Sbjct: 119 PENPTLALPCRTVFESGQRQVEVIGPCLEEEAAKL 153


>gi|42520555|ref|NP_966470.1| riboflavin biosynthesis protein RibD [Wolbachia endosymbiont of
           Drosophila melanogaster]
 gi|42410294|gb|AAS14404.1| riboflavin biosynthesis protein RibD [Wolbachia endosymbiont of
           Drosophila melanogaster]
          Length = 360

 Score =  109 bits (274), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 36/153 (23%), Positives = 59/153 (38%), Gaps = 25/153 (16%)

Query: 3   KGNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
             + FMS AL  A+       +   P VG + V +  I+S              HAE++A
Sbjct: 2   TDDHFMSIALRLAEKNL--GNVAPNPAVGCIIVKDGTIVSEGY----TGIGGRPHAEVVA 55

Query: 59  IRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIEN 112
           ++               +Y+TLEPC        C A I  A I+R+     +P       
Sbjct: 56  LQNAKDSTH-----GATIYITLEPCCHHGVTGPCTAKIIKASIKRVVIATIDPDSRVSGR 110

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
           G +    A      E+  GI ++ ++++   FF
Sbjct: 111 GMKALKEAG----IEVEQGIMQKEAKELNVGFF 139


>gi|154759286|ref|NP_001094076.1| tRNA-specific adenosine deaminase-like protein 3 [Mus musculus]
 gi|81892416|sp|Q6PAT0|ADAT3_MOUSE RecName: Full=tRNA-specific adenosine deaminase-like protein 3;
           AltName: Full=tRNA-specific adenosine-34 deaminase
           subunit ADAT3
 gi|148699580|gb|EDL31527.1| secretory carrier membrane protein 4, isoform CRA_d [Mus musculus]
          Length = 349

 Score =  109 bits (274), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 40/153 (26%), Positives = 65/153 (42%), Gaps = 40/153 (26%)

Query: 26  VGAVAVLN--NKIISRAGNRNRELKDVTAHAEILAIRM----------------GC---- 63
           VGAV V    +++++        +     HA ++ I +                 C    
Sbjct: 195 VGAVVVDPASDRVLATGH-DCSSVASPLLHAVMVCIDLVAQGQGRGSCDLRSHPACSFTQ 253

Query: 64  ------------RILSQEILP----EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKG 107
                       R L ++ LP      DLYVT EPC MCA A+  ARI+R++YGA +P  
Sbjct: 254 ATATQGARAGSVRKLDEDSLPYVCTGYDLYVTREPCVMCAMALVHARIQRVFYGAPSPD- 312

Query: 108 GGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140
           G +    + +     +H  +++ GI E + RQ+
Sbjct: 313 GALGTLFRVHARPDLNHRFQVFRGILEDQCRQL 345


>gi|332295838|ref|YP_004437761.1| riboflavin biosynthesis protein RibD [Thermodesulfobium narugense
           DSM 14796]
 gi|332178941|gb|AEE14630.1| riboflavin biosynthesis protein RibD [Thermodesulfobium narugense
           DSM 14796]
          Length = 372

 Score =  109 bits (274), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 44/155 (28%), Positives = 61/155 (39%), Gaps = 21/155 (13%)

Query: 1   MKKGNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           M     FM  AL+ A N          VG + V + KIIS+  +R         HAE  A
Sbjct: 10  MVLHESFMKKALDLALNGKYYTSPNPMVGCIVVKDKKIISQGYHRAYGE----PHAEANA 65

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
           +               DLYVTLEPC        C + I  + I+R++    +P       
Sbjct: 66  L-----KPKYIDFSGADLYVTLEPCLHYGKTPSCTSKIISSGIKRVFIATLDPNPKMNGK 120

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
             +    A      E+Y GI E+ +R I + FFK 
Sbjct: 121 SVEILKYAG----IEVYTGILEKEARFINRHFFKA 151


>gi|153845346|ref|ZP_01993762.1| riboflavin biosynthesis protein RibD [Vibrio parahaemolyticus
           AQ3810]
 gi|149745121|gb|EDM56372.1| riboflavin biosynthesis protein RibD [Vibrio parahaemolyticus
           AQ3810]
          Length = 280

 Score =  109 bits (274), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 37/152 (24%), Positives = 56/152 (36%), Gaps = 21/152 (13%)

Query: 3   KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +    MS AL+ A+         P VG V V +  I+    +          HAE+ A+R
Sbjct: 13  QDFSMMSRALKLARRGIYTTAPNPNVGCVIVRDGVIVGEGYHHRAGE----PHAEVHAMR 68

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           M               YVTLEPC        CA  +  A++ R+     +P       G 
Sbjct: 69  MAGDKA-----EGATAYVTLEPCSHYGRTPPCAEGLIKAKVARVVCAMEDPNPKVAGRGI 123

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
           Q    A      E+  G+ E  + ++ + F K
Sbjct: 124 QMLREAG----VEVQVGLLENDAIELNRGFIK 151


>gi|222055764|ref|YP_002538126.1| riboflavin biosynthesis protein RibD [Geobacter sp. FRC-32]
 gi|221565053|gb|ACM21025.1| riboflavin biosynthesis protein RibD [Geobacter sp. FRC-32]
          Length = 368

 Score =  109 bits (274), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 38/150 (25%), Positives = 60/150 (40%), Gaps = 21/150 (14%)

Query: 5   NVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
              M  A+  A+    +      VG V V +  I+    +R    K  T HAEI A+R  
Sbjct: 6   ENMMKRAVSLARKGVGKTAPNPAVGCVIVKDGAIVGEGWHR----KAGTPHAEIHALRQA 61

Query: 63  CRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116
             +         D++VTLEPC        CA A+  A++ R+Y G  +P       G   
Sbjct: 62  GALA-----EGADVFVTLEPCSHFGKTPPCADALIAAKVARVYVGMVDPNPRVCGKGISK 116

Query: 117 YTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
              A      ++   + E++ R + + F K
Sbjct: 117 LRAAG----IQVEAPLLEEKCRALNEPFIK 142


>gi|260886861|ref|ZP_05898124.1| riboflavin biosynthesis protein RibD [Selenomonas sputigena ATCC
           35185]
 gi|330839340|ref|YP_004413920.1| riboflavin biosynthesis protein RibD [Selenomonas sputigena ATCC
           35185]
 gi|260863460|gb|EEX77960.1| riboflavin biosynthesis protein RibD [Selenomonas sputigena ATCC
           35185]
 gi|329747104|gb|AEC00461.1| riboflavin biosynthesis protein RibD [Selenomonas sputigena ATCC
           35185]
          Length = 367

 Score =  109 bits (274), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 43/155 (27%), Positives = 66/155 (42%), Gaps = 23/155 (14%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57
           M++   FM  AL  A NA  R   P   VGAV V   +I+    +R    K  T HAE+ 
Sbjct: 1   MQQDEDFMREALLLAANARGRT-APNPLVGAVIVREGRIVGAGWHR----KAGTPHAEVH 55

Query: 58  AIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIE 111
           A+ M   +          +YVTLEPC+       CA A+  A ++R+     +P      
Sbjct: 56  ALAMAGDLAH-----GATVYVTLEPCSHHGRTGPCAEALVKAGVKRVVTAMLDPNPLVAG 110

Query: 112 NGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
            G      A      E+  G+  + +R++ + + K
Sbjct: 111 KGKAMLEAAG----VEVTVGVLAEEARRLNEAYLK 141


>gi|323357173|ref|YP_004223569.1| cytosine/adenosine deaminase [Microbacterium testaceum StLB037]
 gi|323273544|dbj|BAJ73689.1| cytosine/adenosine deaminase [Microbacterium testaceum StLB037]
          Length = 159

 Score =  109 bits (274), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 38/152 (25%), Positives = 57/152 (37%), Gaps = 9/152 (5%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
                +  A+  +Q A      P GA+ V  +  +  A N     +DVT HAE   +R  
Sbjct: 8   TDLAHLHRAIALSQLAREHGNHPFGALLVTADGRVVEAENTVLTERDVTGHAETNLVRRV 67

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI------ENGTQF 116
            + L    LP   LY + EPC MC  AI  A I R+ Y  S      +            
Sbjct: 68  WKDLDAAELPASTLYTSCEPCAMCCGAIFWAGIGRVVYALSGTGLIALAGPEDDGTALDL 127

Query: 117 YTLATCHH---SPEIYPGISEQRSRQIIQDFF 145
            +     H   + E+     E+ + Q  + F+
Sbjct: 128 PSREVFAHGTRAIEVSGPHLEEAAAQPHRGFW 159


>gi|313496881|gb|ADR58247.1| RibD [Pseudomonas putida BIRD-1]
          Length = 376

 Score =  109 bits (274), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 35/152 (23%), Positives = 55/152 (36%), Gaps = 21/152 (13%)

Query: 4   GNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
              +M+ ALE A+           VG V V + +++    +          HAE+ A+R 
Sbjct: 9   DAHYMARALELARKGLYTTHPNPRVGCVIVRDGEVVGEGWHVRAGE----PHAEVHALRQ 64

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
              +           YVTLEPC        CA A+  A + R+     +P       G +
Sbjct: 65  AGELA-----RGACAYVTLEPCSHHGRTPPCAEALVKAGVARVVAAMQDPNPQVAGQGLR 119

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
               A      E+  G+ E  +R +   F K 
Sbjct: 120 RLAEAG----IEVASGVLEAEARALNPGFLKR 147


>gi|237797512|ref|ZP_04585973.1| riboflavin biosynthesis protein RibD [Pseudomonas syringae pv.
           oryzae str. 1_6]
 gi|331020362|gb|EGI00419.1| riboflavin biosynthesis protein RibD [Pseudomonas syringae pv.
           oryzae str. 1_6]
          Length = 381

 Score =  109 bits (274), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 35/152 (23%), Positives = 55/152 (36%), Gaps = 21/152 (13%)

Query: 4   GNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
              +M+ ALE A+           VG V V + +I+    +          HAE+ A+R 
Sbjct: 12  DVHYMAHALELARKGLYSTHPNPRVGCVIVRDGQIVGEGWHARAGE----PHAEVHALRQ 67

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
              +           YVTLEPC        CA A+  A + R+     +P       G  
Sbjct: 68  AGELA-----RGATAYVTLEPCSHQGRTPPCADALVEAGLSRVVAAMQDPNPEVSGRGL- 121

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
              L   +    +  G+ E  +R + + F K 
Sbjct: 122 ---LRLMNAGIGVQCGVLENEARALNKGFLKR 150


>gi|323436092|ref|ZP_08088234.1| riboflavin biosynthesis protein RibD [Dokdonia donghaensis MED134]
 gi|321496407|gb|EAQ38739.2| riboflavin biosynthesis protein RibD [Dokdonia donghaensis MED134]
          Length = 346

 Score =  109 bits (273), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 38/153 (24%), Positives = 65/153 (42%), Gaps = 19/153 (12%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           K  N ++   +  A+N      +P   VGAV V NN II+              HAE+  
Sbjct: 15  KIHNTYIKRCIALAKNGLPAA-MPNPSVGAVLVHNNTIIAEGY--TSAYGGP--HAEVNC 69

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
           I    +  + E++ +  LYV+LEPC        CA  +  + I+R+  G  +P       
Sbjct: 70  I-AFAKANTPELIAKSTLYVSLEPCSHWGKTPPCADLVIDSGIKRVVIGTIDPFAKVAGA 128

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
           G +    A      ++  G+ E+  +++ + FF
Sbjct: 129 GIKKLMQAG----VDVTVGVLEKECQEVNKRFF 157


>gi|304395476|ref|ZP_07377359.1| riboflavin biosynthesis protein RibD [Pantoea sp. aB]
 gi|304356770|gb|EFM21134.1| riboflavin biosynthesis protein RibD [Pantoea sp. aB]
          Length = 366

 Score =  109 bits (273), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 33/155 (21%), Positives = 55/155 (35%), Gaps = 23/155 (14%)

Query: 4   GNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
             ++M+ ALE A+       +P   VG V V + ++     ++         HAE+ A+R
Sbjct: 2   DELYMARALELARRGRFTT-MPNPNVGCVIVRDGEVAGEGWHQRAGE----PHAEVHALR 56

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           M               YVTLEPC        C  A+  A + R+     +P       G 
Sbjct: 57  MAGEKA-----RGATAYVTLEPCSHHGRTPPCCDALIAAGVSRVVAAMQDPNPQVAGRGL 111

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
                +       +  G+    +  + + F K  R
Sbjct: 112 HRLHQSG----IAVSHGLMMPEAEALNRGFLKRMR 142


>gi|304315557|ref|YP_003850702.1| riboflavin biosynthesis protein RibD [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
 gi|302777059|gb|ADL67618.1| riboflavin biosynthesis protein RibD [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
          Length = 356

 Score =  109 bits (273), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 39/147 (26%), Positives = 60/147 (40%), Gaps = 21/147 (14%)

Query: 8   MSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M  AL+ A+         P VGAV V N +II    +          HAEI A+      
Sbjct: 1   MKRALQLAKLGLGHTNPNPLVGAVIVKNGRIIGEGYHEYYGG----PHAEINAL-----K 51

Query: 66  LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
             +E +    LYVTLEPC        C  AI  + I+ ++    +P       G +    
Sbjct: 52  SVKEDVIGAQLYVTLEPCCHYGKTPPCVDAIVKSGIKDVFIAMEDPNKLVSGKGIKHLKE 111

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFK 146
           A  +    +Y G+ ++ + +I + F K
Sbjct: 112 AGLN----VYTGLLKEEAEKINEIFIK 134


>gi|126175361|ref|YP_001051510.1| riboflavin biosynthesis protein RibD [Shewanella baltica OS155]
 gi|125998566|gb|ABN62641.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase /
           diaminohydroxyphosphoribosylaminopyrimidine deaminase
           [Shewanella baltica OS155]
          Length = 384

 Score =  109 bits (273), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 37/152 (24%), Positives = 56/152 (36%), Gaps = 21/152 (13%)

Query: 4   GNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
               MS A++ A+      R    VG V V +N+I+    ++         HAE+ A+RM
Sbjct: 11  DTQMMSRAIQLARKGFYTTRPNPSVGCVIVKDNQIVGEGYHQKAGE----PHAEVHALRM 66

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
                  E       YVTLEPC        CA A+    ++R+     +P       G Q
Sbjct: 67  AG-----EHARGATAYVTLEPCSHYGRTPPCALALINIGVKRVVVAVEDPNPQVAGRGIQ 121

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
               A      E+  G+    +  +   F K 
Sbjct: 122 MLRDAG----IEVDVGLHRDEAYALNLGFMKR 149


>gi|228992853|ref|ZP_04152778.1| RibD (Riboflavin-specific deaminase) [Bacillus pseudomycoides DSM
           12442]
 gi|228766902|gb|EEM15540.1| RibD (Riboflavin-specific deaminase) [Bacillus pseudomycoides DSM
           12442]
          Length = 373

 Score =  109 bits (273), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 36/155 (23%), Positives = 61/155 (39%), Gaps = 23/155 (14%)

Query: 1   MKK--GNVFMSCALEEAQ-NAALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56
           MK+     +M  AL+ AQ  A   +  P VGAV V +  I+    +     +    HAE+
Sbjct: 1   MKRMTDQEYMRIALQLAQSTAGQTSPNPMVGAVVVKDGNIVGMGAHLLAGEE----HAEV 56

Query: 57  LAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGI 110
            A+RM              +YVTLEPC        C   +   +++R+     +      
Sbjct: 57  HALRMAGDKA-----NGSTVYVTLEPCSHFGKTPPCCDLLIEKKVKRVVIATLDCNPLVS 111

Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
            +G +    A       +  G+ E+ +  + + FF
Sbjct: 112 GSGAKRLQKAG----ISVTTGVLEEEATALNRYFF 142


>gi|206578559|ref|YP_002240118.1| riboflavin biosynthesis protein RibD [Klebsiella pneumoniae 342]
 gi|206567617|gb|ACI09393.1| riboflavin biosynthesis protein RibD [Klebsiella pneumoniae 342]
          Length = 367

 Score =  109 bits (273), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 34/155 (21%), Positives = 56/155 (36%), Gaps = 21/155 (13%)

Query: 3   KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +  ++M+ AL+ A       +  P VG V V + +I+    +          HAE+ A+R
Sbjct: 2   QDEMYMARALKLATRGRFTTHPNPNVGCVIVKDGEIVGEGFHYRAGE----PHAEVHALR 57

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           M               YVTLEPC        C  A+  A + R+     +P       G 
Sbjct: 58  MAGEKAQ-----GATAYVTLEPCSHHGRTPPCCDALIAAGVSRVVAAMQDPNPQVAGRGL 112

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
                A      ++  G+    +  + + F K  R
Sbjct: 113 YRLQQAG----IDVSHGLMMNEAEALNKGFLKRMR 143


>gi|323141090|ref|ZP_08075995.1| riboflavin biosynthesis protein RibD [Phascolarctobacterium sp. YIT
           12067]
 gi|322414466|gb|EFY05280.1| riboflavin biosynthesis protein RibD [Phascolarctobacterium sp. YIT
           12067]
          Length = 388

 Score =  109 bits (273), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 35/154 (22%), Positives = 57/154 (37%), Gaps = 26/154 (16%)

Query: 3   KGNVFMSCALEEAQNAALRNEI---P-VGAVAVL-NNKIISRAGNRNRELKDVTAHAEIL 57
               +M  ALE A  A         P VG V V     I+    +          HAE+ 
Sbjct: 16  TDEAYMQRALELALQA--EGNTSPNPMVGCVIVDAEGNIVGEGYHHKAGE----PHAEVN 69

Query: 58  AIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIE 111
           A+    ++           YVTLEPC        C  A++ A I ++     +P      
Sbjct: 70  ALAEAKQMAQ-----GATAYVTLEPCAHYGRTGPCCVALARAGIGKVVVACLDPNPKVAG 124

Query: 112 NGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
            G ++  L       E+  G+ E+ ++++ + FF
Sbjct: 125 QGLEYLRLQG----IEVVTGVCEKEAKRLNERFF 154


>gi|304410191|ref|ZP_07391810.1| riboflavin biosynthesis protein RibD [Shewanella baltica OS183]
 gi|307302098|ref|ZP_07581856.1| riboflavin biosynthesis protein RibD [Shewanella baltica BA175]
 gi|304351600|gb|EFM15999.1| riboflavin biosynthesis protein RibD [Shewanella baltica OS183]
 gi|306914136|gb|EFN44557.1| riboflavin biosynthesis protein RibD [Shewanella baltica BA175]
          Length = 384

 Score =  109 bits (273), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 37/152 (24%), Positives = 56/152 (36%), Gaps = 21/152 (13%)

Query: 4   GNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
               MS A++ A+      R    VG V V +N+I+    ++         HAE+ A+RM
Sbjct: 11  DTQMMSRAIQLARKGFYTTRPNPSVGCVIVKDNQIVGEGYHQKAGE----PHAEVHALRM 66

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
                  E       YVTLEPC        CA A+    ++R+     +P       G Q
Sbjct: 67  AG-----EHARGATAYVTLEPCSHYGRTPPCALALINIGVKRVVVAVEDPNPQVAGRGIQ 121

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
               A      E+  G+    +  +   F K 
Sbjct: 122 MLRDAG----IEVDVGLHRDEAYALNLGFMKR 149


>gi|320546418|ref|ZP_08040733.1| riboflavin biosynthesis protein RibD [Streptococcus equinus ATCC
           9812]
 gi|320448803|gb|EFW89531.1| riboflavin biosynthesis protein RibD [Streptococcus equinus ATCC
           9812]
          Length = 351

 Score =  109 bits (273), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 40/157 (25%), Positives = 64/157 (40%), Gaps = 22/157 (14%)

Query: 4   GNVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
              +M  A+EEA+    +      VGAV V +N +I+R  +     +    HAE  AI  
Sbjct: 2   DKNYMLQAIEEAKRGFRQTYTNPLVGAVIVKDNHVIARGAHLQYGHE----HAEKNAI-- 55

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
                + E L    LYVTLEPC        C  AI    I+++  G  +P       G  
Sbjct: 56  -LHCQTPEELFNSTLYVTLEPCHHGGKQPPCTQAIVEVGIKKVVAGQFDPNPLVAGKGVA 114

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQD---FFKERR 149
           F          E+   + E+ +R + +    +++ +R
Sbjct: 115 FLKEQG----IEVVTHVLEEEARALNKHYNVYYERKR 147


>gi|170717790|ref|YP_001784854.1| riboflavin biosynthesis protein RibD [Haemophilus somnus 2336]
 gi|168825919|gb|ACA31290.1| riboflavin biosynthesis protein RibD [Haemophilus somnus 2336]
          Length = 376

 Score =  109 bits (273), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 36/155 (23%), Positives = 58/155 (37%), Gaps = 21/155 (13%)

Query: 3   KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +   FM  AL+ A+         P VG V V N +I+ R  +   +      HAE++A+R
Sbjct: 8   QDEYFMQIALDLAKKGIFTTTPNPAVGCVLVKNGEIVGRGFH--FKAGQP--HAEVMALR 63

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
                   +       YVTLEPC        CA  +  A IR +     +P       G 
Sbjct: 64  DAG-----DRAKGATAYVTLEPCSHFGRTPPCAQGLIEAGIRNVIVAMKDPNPQVAGKGL 118

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
                A    +     G+ ++++  + + F    R
Sbjct: 119 AMLQAAGIESAV----GLLQEKAELLNKGFLTRMR 149


>gi|288936867|ref|YP_003440926.1| riboflavin biosynthesis protein RibD [Klebsiella variicola At-22]
 gi|290510077|ref|ZP_06549447.1| riboflavin biosynthesis protein RibD [Klebsiella sp. 1_1_55]
 gi|288891576|gb|ADC59894.1| riboflavin biosynthesis protein RibD [Klebsiella variicola At-22]
 gi|289776793|gb|EFD84791.1| riboflavin biosynthesis protein RibD [Klebsiella sp. 1_1_55]
          Length = 367

 Score =  109 bits (273), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 34/155 (21%), Positives = 56/155 (36%), Gaps = 21/155 (13%)

Query: 3   KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +  ++M+ AL+ A       +  P VG V V + +I+    +          HAE+ A+R
Sbjct: 2   QDEMYMARALKLAARGRFTTHPNPNVGCVIVKDGEIVGEGFHYRAGE----PHAEVHALR 57

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           M               YVTLEPC        C  A+  A + R+     +P       G 
Sbjct: 58  MAGEKAQ-----GATAYVTLEPCSHHGRTPPCCDALIAAGVSRVVAAMQDPNPQVAGRGL 112

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
                A      ++  G+    +  + + F K  R
Sbjct: 113 YRLQQAG----IDVSHGLMMNEAEALNKGFLKRMR 143


>gi|320139809|gb|EFW31673.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp.
           aureus MRSA131]
          Length = 343

 Score =  109 bits (273), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 38/150 (25%), Positives = 63/150 (42%), Gaps = 26/150 (17%)

Query: 8   MSCALEEAQNAALRNEI--PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M  A++ A     +  +  PVGAV V   +I+    +  +  K    HAE+ A+ M    
Sbjct: 1   MDYAIQLANMVQGQTGVNPPVGAVVVKEGRIVGIGAHLRKGDK----HAEVQALDMA--- 53

Query: 66  LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
             Q+      +Y+TLEPC        C   I   +I ++ Y   +       N    +  
Sbjct: 54  --QQNAEGATIYITLEPCSHFGSTPPCVNKIIDCKIAKVVYATKD-------NSLDTHGD 104

Query: 120 ATCH-HSPEIYPGISEQRSRQIIQDFFKER 148
            T   H  E+   + ++R+ Q+ QDFFK +
Sbjct: 105 ETLRAHGIEVEC-VDDERASQLYQDFFKAK 133


>gi|111657939|ref|ZP_01408648.1| hypothetical protein SpneT_02000888 [Streptococcus pneumoniae
           TIGR4]
          Length = 360

 Score =  109 bits (273), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 41/145 (28%), Positives = 57/145 (39%), Gaps = 21/145 (14%)

Query: 8   MSCALEEAQN-AALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M  A++ AQ  A   N  P VGAV V +N II +  +          HAE  A++  CR 
Sbjct: 1   MKLAIKLAQKGAGYVNPNPMVGAVIVKDNHIIGQGYHEFFGG----PHAERNALKN-CRE 55

Query: 66  LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
                     LYVTLEPC        C  AI  + I R+  G+ +        G +    
Sbjct: 56  SP----VGATLYVTLEPCCHFGKTPPCIDAIIDSGITRVVIGSLDCNPIVSGKGVKILEE 111

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDF 144
                  ++  GI E     +I+ F
Sbjct: 112 NNL----QVTVGILENECLNLIKSF 132


>gi|26987252|ref|NP_742677.1| riboflavin biosynthesis protein RibD [Pseudomonas putida KT2440]
 gi|24981894|gb|AAN66141.1|AE016242_9 riboflavin biosynthesis protein RibD [Pseudomonas putida KT2440]
          Length = 378

 Score =  109 bits (273), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 35/152 (23%), Positives = 55/152 (36%), Gaps = 21/152 (13%)

Query: 4   GNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
              +M+ ALE A+           VG V V + +++    +          HAE+ A+R 
Sbjct: 11  DAHYMARALELARKGLYTTHPNPRVGCVIVRDGEVVGEGWHVRAGE----PHAEVHALRQ 66

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
              +           YVTLEPC        CA A+  A + R+     +P       G +
Sbjct: 67  AGELA-----RGACAYVTLEPCSHHGRTPPCAEALVKAGVARVVAAMQDPNPQVAGQGLR 121

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
               A      E+  G+ E  +R +   F K 
Sbjct: 122 RLAEAG----IEVASGVLEAEARALNPGFLKR 149


>gi|148545799|ref|YP_001265901.1| riboflavin biosynthesis protein RibD [Pseudomonas putida F1]
 gi|148509857|gb|ABQ76717.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Pseudomonas putida F1]
          Length = 376

 Score =  109 bits (273), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 35/152 (23%), Positives = 55/152 (36%), Gaps = 21/152 (13%)

Query: 4   GNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
              +M+ ALE A+           VG V V + +++    +          HAE+ A+R 
Sbjct: 9   DAHYMARALELARKGLYTTHPNPRVGCVIVRDGEVVGEGWHVRAGE----PHAEVHALRQ 64

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
              +           YVTLEPC        CA A+  A + R+     +P       G +
Sbjct: 65  AGELA-----RGACAYVTLEPCSHHGRTPPCAEALVKAGVARVVAAMQDPNPQVAGQGLR 119

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
               A      E+  G+ E  +R +   F K 
Sbjct: 120 RLAEAG----IEVASGVLEAEARALNPGFLKR 147


>gi|331001110|ref|ZP_08324741.1| riboflavin biosynthesis protein RibD [Parasutterella
           excrementihominis YIT 11859]
 gi|329569415|gb|EGG51193.1| riboflavin biosynthesis protein RibD [Parasutterella
           excrementihominis YIT 11859]
          Length = 355

 Score =  109 bits (273), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 39/150 (26%), Positives = 62/150 (41%), Gaps = 18/150 (12%)

Query: 8   MSCALEEAQNAALR--NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M  ALE A+ A         VG V V + +II     +        AHAE++A+R     
Sbjct: 1   MRRALELAKKARFNCPPNPAVGCVIVKDRRIIGEGFTQKTGE----AHAEVMALRDAASR 56

Query: 66  LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
              E +    +YVTLEPC        CA A+  A++ R+     +P       G +    
Sbjct: 57  --GESVAGATVYVTLEPCSHYGRTPPCALALKNAKVARVVAALKDPNPLVAGKGLKMLEE 114

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
           A      ++  G+  + + +I + F K +R
Sbjct: 115 AG----VKVECGLEAEEAEEINRGFLKRQR 140


>gi|242278131|ref|YP_002990260.1| riboflavin biosynthesis protein RibD [Desulfovibrio salexigens DSM
           2638]
 gi|242121025|gb|ACS78721.1| riboflavin biosynthesis protein RibD [Desulfovibrio salexigens DSM
           2638]
          Length = 377

 Score =  109 bits (273), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 39/158 (24%), Positives = 60/158 (37%), Gaps = 25/158 (15%)

Query: 4   GNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
              FM+ A+E A     R   P   VGAV V + +I++   +          HAE   I 
Sbjct: 8   DERFMARAVELAIRGRNRT-APNPTVGAVMVRDGQIVAEGYHMFCGGL----HAERECI- 61

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
                     + +  +YVTLEPC        C   I  A I  +  G  +P       G 
Sbjct: 62  -ADAKAKGVDMSKCTMYVTLEPCNHHGKTPPCTEGILEASIPHIVVGTRDPNPKAAG-GI 119

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF----FKER 148
           ++           +  G+ E++ + +I DF    FK+R
Sbjct: 120 EYLESKG----VRVDQGVLEEQCKDLISDFLCWQFKDR 153


>gi|170117507|ref|XP_001889940.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164635076|gb|EDQ99389.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 153

 Score =  109 bits (273), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 38/149 (25%), Positives = 64/149 (42%), Gaps = 23/149 (15%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNK--------IISRAGNRNRELKDVTAHAEILAI 59
           M  A+ EAQ    +  IP+G+V +L N+        ++    N   +    T    I A+
Sbjct: 6   MILAISEAQMGHKQGGIPIGSVLLLPNESDAEGTFTLLGSGHNERIQKSSPTL---ISAL 62

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
               R LS E+  +  +Y TL PC+MC+ AI L +I R+  G +    G  E        
Sbjct: 63  ENAGR-LSPEVYRKSTIYTTLSPCSMCSGAILLYKIPRVVIGENETFLGEEE----LLRS 117

Query: 120 ATCHHSPEIYPGISE-QRSRQIIQDFFKE 147
                  E+   + + +  + I++ F +E
Sbjct: 118 RG----VEVV--VLDNEECKDIMRRFIQE 140


>gi|299143100|ref|ZP_07036209.1| riboflavin biosynthesis protein RibD [Prevotella oris C735]
 gi|298575428|gb|EFI47325.1| riboflavin biosynthesis protein RibD [Prevotella oris C735]
          Length = 318

 Score =  109 bits (273), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 39/150 (26%), Positives = 59/150 (39%), Gaps = 17/150 (11%)

Query: 3   KGNVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +   +M   L+ A+N          VGAV V +++II    +          HAE+ A  
Sbjct: 2   EHEYYMKRCLQLAENGRQNAKLNPMVGAVIVAHDRIIGEGYHVRCGEG----HAEVNAF- 56

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
              R   +++LPE  +YV+LEPC        CA  I    I+R   G  +P       G 
Sbjct: 57  ASVRPEDEKLLPEATIYVSLEPCSHYGKTPPCADLIISKGIKRCVCGCVDPFAKVQGRGI 116

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
           Q    A      E+  G+ E     + + F
Sbjct: 117 QRMRDAG----IEVVVGVMEAECLALNRRF 142


>gi|217972396|ref|YP_002357147.1| riboflavin biosynthesis protein RibD [Shewanella baltica OS223]
 gi|217497531|gb|ACK45724.1| riboflavin biosynthesis protein RibD [Shewanella baltica OS223]
          Length = 384

 Score =  109 bits (273), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 37/152 (24%), Positives = 56/152 (36%), Gaps = 21/152 (13%)

Query: 4   GNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
               MS A++ A+      R    VG V V +N+I+    ++         HAE+ A+RM
Sbjct: 11  DTQMMSRAIQLARKGFYTTRPNPSVGCVIVKDNQIVGEGYHQKAGE----PHAEVHALRM 66

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
                  E       YVTLEPC        CA A+    ++R+     +P       G Q
Sbjct: 67  AG-----EHARGATAYVTLEPCSHYGRTPPCALALINIGVKRVVVAVEDPNPQVAGRGIQ 121

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
               A      E+  G+    +  +   F K 
Sbjct: 122 MLRDAG----IEVDVGLHRDEAYALNLGFMKR 149


>gi|241888469|ref|ZP_04775779.1| riboflavin biosynthesis protein RibD [Gemella haemolysans ATCC
           10379]
 gi|241864861|gb|EER69233.1| riboflavin biosynthesis protein RibD [Gemella haemolysans ATCC
           10379]
          Length = 356

 Score =  109 bits (273), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 36/145 (24%), Positives = 54/145 (37%), Gaps = 19/145 (13%)

Query: 4   GNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
              FM  AL EA+           VGA+ V +++II+R  +          HAE  AI  
Sbjct: 2   HEYFMKLALLEAKRGTKYTHTNPIVGAIIVKDDEIIARGSHLRY----GCEHAEKNAI-- 55

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
                + E L    LYVTLEPC        C   I    I ++     +P       G +
Sbjct: 56  -STCETPEKLFNSTLYVTLEPCNHKGKQPPCTDTIVEMGISKVVVAQLDPNPLVSGKGIK 114

Query: 116 FYTLATCHHSPEIYPGISEQRSRQI 140
           +          E+  G+ E+ +  +
Sbjct: 115 YLQDNG----IEVITGVLEKEAYNL 135


>gi|284031454|ref|YP_003381385.1| CMP/dCMP deaminase zinc-binding protein [Kribbella flavida DSM
           17836]
 gi|283810747|gb|ADB32586.1| CMP/dCMP deaminase zinc-binding protein [Kribbella flavida DSM
           17836]
          Length = 143

 Score =  108 bits (272), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 26/118 (22%), Positives = 52/118 (44%), Gaps = 1/118 (0%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
              F+  A+E A  A      P G++    +  +++   N +    D+TAH E+   R  
Sbjct: 6   DEGFLRRAIELAATADKSGNPPFGSLLAGPDGTVLAEDHNTSVTDNDITAHPELKLARWA 65

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              L+ ++     +Y + +PC MC+ A+  + + R+ Y  S  +   ++ G  F  + 
Sbjct: 66  AANLTPDVAAGTTMYTSCQPCRMCSGALERSGLGRVVYALSGDQLNALKPGGGFAPVP 123


>gi|34540017|ref|NP_904496.1| riboflavin biosynthesis protein RibD [Porphyromonas gingivalis W83]
 gi|34396328|gb|AAQ65395.1| riboflavin biosynthesis protein RibD [Porphyromonas gingivalis W83]
          Length = 330

 Score =  108 bits (272), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 39/157 (24%), Positives = 63/157 (40%), Gaps = 19/157 (12%)

Query: 1   MKKGNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           M    ++M  A+E AQNA         VGAV V + +II    +    +     HAE++A
Sbjct: 1   MTPDPLYMRRAIELAQNAEGFTSPNPLVGAVLVAHGRIIGEGYHHCAGM----PHAEVIA 56

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
           I     +  + +L E  LYV+LEPC        CA  I    I  +     +P       
Sbjct: 57  INS---VRDRALLRESTLYVSLEPCSHYGKTPPCAELILREGIPHVVVAMLDPFPSVSGR 113

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
           G +    A       +  G+  + + ++ + F   +R
Sbjct: 114 GIKMLRDAG----VSVQVGLLAEEAEELNRHFLTAQR 146


>gi|305667257|ref|YP_003863544.1| putative riboflavin biosynthesis protein [Maribacter sp. HTCC2170]
 gi|88709304|gb|EAR01537.1| putative riboflavin biosynthesis protein [Maribacter sp. HTCC2170]
          Length = 350

 Score =  108 bits (272), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 44/158 (27%), Positives = 63/158 (39%), Gaps = 21/158 (13%)

Query: 1   MKKGNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           M   +++M  AL  A+N          VGAV V N KII+             AHAE+ A
Sbjct: 1   MSLDHLYMQRALLLAKNGLGTTAPNPMVGAVLVCNEKIIAEGYTSPYGG----AHAEVNA 56

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
           I     +  + IL    LYVTLEPC        CA  I    I R+  G  +        
Sbjct: 57  INS---VEDKSILANSTLYVTLEPCSHHGKTPPCADLIIKHNIPRVVIGTLDSHEKVAGK 113

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDF--FKER 148
           G +    + C    ++  G+ E   ++  + F  F +R
Sbjct: 114 GKRMLEESGC----KVTLGVLENACKEHHKRFLTFHQR 147


>gi|320529850|ref|ZP_08030927.1| riboflavin biosynthesis protein RibD [Selenomonas artemidis F0399]
 gi|320137868|gb|EFW29773.1| riboflavin biosynthesis protein RibD [Selenomonas artemidis F0399]
          Length = 369

 Score =  108 bits (272), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 44/152 (28%), Positives = 64/152 (42%), Gaps = 21/152 (13%)

Query: 3   KGNVFMSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +   FM  AL  A+ A  R    P VGAV V +  ++    +R         HAEI A+R
Sbjct: 7   RDEHFMWEALHLAEFARGRTSPNPLVGAVIVRDGIVVGSGWHRVAGE----PHAEIHALR 62

Query: 61  MGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGT 114
           M   +          LYVTLEPC+       CA A+  A I R+    S+P      +G 
Sbjct: 63  MAGELA-----RGATLYVTLEPCSHHGRTGPCAEAVIAAGIARVVTALSDPNPVVAGHGI 117

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
           +    A      E+  G+  + +R+  + F K
Sbjct: 118 ERLRAAG----IEVTTGVLSEEARRQNEVFLK 145


>gi|308272935|emb|CBX29539.1| Riboflavin biosynthesis protein ribD [uncultured Desulfobacterium
           sp.]
          Length = 380

 Score =  108 bits (272), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 33/152 (21%), Positives = 59/152 (38%), Gaps = 21/152 (13%)

Query: 3   KGNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
               +M  A++ A+           VGAV V + K+  +  +         AHAE+ AI 
Sbjct: 16  DDLFYMKMAIDLAEKGRGFTSPNPMVGAVVVKDGKVAGKGYHEAYGK----AHAEVNAID 71

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
              +           LYVTLEPC        C   I  + I+R+     +P      NG+
Sbjct: 72  DAKKDSF-----GATLYVTLEPCNHFGKTPPCTKKIIESGIKRVVAAIRDPNPDVKGNGS 126

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
           ++      ++  ++  G+  + + +  + F K
Sbjct: 127 EYLK----NNGIDVIFGVCGKEAEKQNEIFIK 154


>gi|303327265|ref|ZP_07357707.1| riboflavin biosynthesis protein RibD [Desulfovibrio sp. 3_1_syn3]
 gi|302863253|gb|EFL86185.1| riboflavin biosynthesis protein RibD [Desulfovibrio sp. 3_1_syn3]
          Length = 385

 Score =  108 bits (272), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 35/154 (22%), Positives = 58/154 (37%), Gaps = 21/154 (13%)

Query: 1   MKKGNV--FMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56
           M + +   FM  A+  A+         P VGAV + + ++++R  +     +D   HAE+
Sbjct: 1   MTEQDFAPFMREAIALAEQGRWKACPNPTVGAVLLRDGRVVARGWHH-EAGQD---HAEV 56

Query: 57  LAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGI 110
             ++               L VTLEPC        C  AI  A I R+  G ++P     
Sbjct: 57  DCLKDAATRGVDP--KGCTLVVTLEPCNHQGKTPPCTQAILDAGISRVVMGLADPNPQAA 114

Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
               +           E+   + E   R ++ DF
Sbjct: 115 GGAARLRDT-----GMEVLGPVCEAECRDLVADF 143


>gi|156843603|ref|XP_001644868.1| hypothetical protein Kpol_1065p25 [Vanderwaltozyma polyspora DSM
           70294]
 gi|156115520|gb|EDO17010.1| hypothetical protein Kpol_1065p25 [Vanderwaltozyma polyspora DSM
           70294]
          Length = 154

 Score =  108 bits (272), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 39/150 (26%), Positives = 60/150 (40%), Gaps = 13/150 (8%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAI 59
           K   + M  A EEA        +P+G   +   + KI+ R  N   +    T H EI  +
Sbjct: 5   KWDKLGMDVAYEEASKGYEEGGVPIGGCLINNEDGKILGRGHNMRFQKGSATLHGEISTL 64

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS-NPKGGGIENGTQFYT 118
               R+   ++     LY TL PC MC  AI +  I R+  G + N K  G E       
Sbjct: 65  ENCGRLEG-KVYKNTTLYTTLSPCDMCTGAILMYGIPRVVVGENVNFKSPGEEYLKS--- 120

Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKER 148
                   E+   + ++R + I+  F + R
Sbjct: 121 -----RGAEVLV-VDDERCKSIMNLFIETR 144


>gi|154333185|ref|XP_001562853.1| deaminase [Leishmania braziliensis MHOM/BR/75/M2904]
 gi|134059858|emb|CAM37286.1| putative deaminase [Leishmania braziliensis MHOM/BR/75/M2904]
          Length = 276

 Score =  108 bits (272), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 48/256 (18%), Positives = 75/256 (29%), Gaps = 113/256 (44%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVL-------------------------------N 33
           + FM  AL EA+ A    E+PVG V V                                +
Sbjct: 7   DAFMRAALSEAEMALEEGEVPVGCVLVRTDANEAAYMKFALQSPDAITGASPHTASSLSD 66

Query: 34  NKII-----SRAGNRNRELKDVTAHAEILA---IRMGCRILSQ----------------- 68
           ++++     +R  N+        AHAE +A   +R                         
Sbjct: 67  DQLVESCIAARGRNQTNLQHHALAHAEFIAAEQLRDAATRGGDASAGASASEAGAAGGTK 126

Query: 69  --------------------EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGG 108
                                 L E  LYVT+EPC MC+A +   RI  +++G  NP+ G
Sbjct: 127 DLVELAKENQLTSSSTVTPLSDLAEYVLYVTVEPCVMCSAMLLYNRIEHVFFGCRNPRFG 186

Query: 109 GIENGTQFYTLATCH----------HSPEIY---------------------------PG 131
           G       +T    H          H P +                             G
Sbjct: 187 GNGTVLALHTPLCLHEPSEPAQPAAHGPRLVDTSKRSPSAHENGSECSGAWWPGYVSEGG 246

Query: 132 ISEQRSRQIIQDFFKE 147
            +E  +  ++Q F++ 
Sbjct: 247 HTEAEAISLLQRFYER 262


>gi|120602900|ref|YP_967300.1| riboflavin biosynthesis protein RibD [Desulfovibrio vulgaris DP4]
 gi|120563129|gb|ABM28873.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Desulfovibrio
           vulgaris DP4]
          Length = 377

 Score =  108 bits (272), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 36/146 (24%), Positives = 56/146 (38%), Gaps = 19/146 (13%)

Query: 7   FMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           FM  A+  A+           VGAV V + ++++R  +          HAE+  +R    
Sbjct: 8   FMREAIALAERGRWYAAPNPTVGAVLVRDGEVVARGWHTGYGK----PHAEVECLRDAAS 63

Query: 65  ILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
                      L VTLEPC        C+ AI  A I R+  G ++P       G ++  
Sbjct: 64  KGVDP--AHCTLVVTLEPCNHHGKTPPCSHAIVKAGITRVVVGLADPNPVASG-GAEYLR 120

Query: 119 LATCHHSPEIYPGISEQRSRQIIQDF 144
                H   +  G+ EQ    ++ DF
Sbjct: 121 A----HGVTVDMGVCEQECHDLVADF 142


>gi|229047052|ref|ZP_04192675.1| Riboflavin biosynthesis protein [Bacillus cereus AH676]
 gi|228724291|gb|EEL75625.1| Riboflavin biosynthesis protein [Bacillus cereus AH676]
          Length = 358

 Score =  108 bits (272), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 43/146 (29%), Positives = 63/146 (43%), Gaps = 23/146 (15%)

Query: 8   MSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           M  ALE A  A      P   VG+V V +N+I+    +          HAEI AIRM   
Sbjct: 1   MKLALENA-KAMKGQTTPNPLVGSVIVNDNRIVGVGAHMKAGE----PHAEIHAIRMAG- 54

Query: 65  ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
               E +    +YVTLEPC+       CA AI  A I+++     +P       G +   
Sbjct: 55  ----EQVRGATIYVTLEPCSHHGRTGPCAEAIVQAGIKKVVVATLDPNPLVSGRGIKILQ 110

Query: 119 LATCHHSPEIYPGISEQRSRQIIQDF 144
            A      E+  G+ E+ S+++ + F
Sbjct: 111 DAG----IEVLVGVCEEESKKMNEVF 132


>gi|253990958|ref|YP_003042314.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Photorhabdus asymbiotica subsp. asymbiotica
           ATCC 43949]
 gi|253782408|emb|CAQ85572.1| Riboflavin biosynthesis protein [Photorhabdus asymbiotica]
          Length = 362

 Score =  108 bits (272), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 37/150 (24%), Positives = 55/150 (36%), Gaps = 21/150 (14%)

Query: 8   MSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M+ ALE A+      +  P VG V V + +I+    +          HAE+ A+RM    
Sbjct: 1   MARALELARQGCFTTSPNPNVGCVIVRDGQIVGEGFHLRSGG----PHAEVHALRMAGDK 56

Query: 66  LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
                      YVTLEPC        CA A+  A + R+     +P       G      
Sbjct: 57  A-----KGSTAYVTLEPCSHHGKTPPCADALIAAGVSRVVTAMQDPNPQVAGRGLYKLQQ 111

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
           A      E+  G+    +  + + F K  R
Sbjct: 112 AG----IEVEHGLMMAEAESLNRGFLKRMR 137


>gi|209364139|ref|YP_001424993.2| guanine deaminase [Coxiella burnetii Dugway 5J108-111]
 gi|207082072|gb|ABS77888.2| guanine deaminase [Coxiella burnetii Dugway 5J108-111]
          Length = 298

 Score =  108 bits (272), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 36/135 (26%), Positives = 50/135 (37%), Gaps = 22/135 (16%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAV----LNNKIISR--AGNRNRELKDVTAHAEI 56
            G+ +   A EEA  +A     P GAV V     + ++       N + +  D TAHAE+
Sbjct: 122 SGDKWAKLANEEALKSAKLGSPPFGAVIVQIDDKSGRVFRYWVDHNHSVDWHDPTAHAEM 181

Query: 57  LAIRMGCRILSQEIL----------------PEVDLYVTLEPCTMCAAAISLARIRRLYY 100
             IR   R L+   L                    +Y + EPC MC AAI  A I  L +
Sbjct: 182 SVIRKAARELNVTDLGHIRKEDSKLSQPSEWSHCVIYSSAEPCPMCMAAIYWAGIHYLVF 241

Query: 101 GASNPKGGGIENGTQ 115
            A+            
Sbjct: 242 SATRYDTAAPGVNWD 256


>gi|330964923|gb|EGH65183.1| riboflavin biosynthesis protein RibD [Pseudomonas syringae pv.
           actinidiae str. M302091]
          Length = 378

 Score =  108 bits (272), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 35/152 (23%), Positives = 56/152 (36%), Gaps = 21/152 (13%)

Query: 4   GNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
              +M+ ALE A+           VG V V + +I+ +  +          HAE+ A+R 
Sbjct: 9   DVHYMAHALELARKGLYSTHPNPRVGCVIVRDGQIVGQGWHARAGE----PHAEVHALRE 64

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
              +           YVTLEPC        CA A+  A + R+     +P      +G  
Sbjct: 65  AGELA-----RGATAYVTLEPCSHQGRTPPCADALISAGLGRVVAAMQDPNPQVAGSGLL 119

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
               A       +  G+ E  +R + + F K 
Sbjct: 120 RLMTAG----ISVQCGVLEGEARALNKGFIKR 147


>gi|228973365|ref|ZP_04133953.1| Riboflavin biosynthesis protein [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228786345|gb|EEM34336.1| Riboflavin biosynthesis protein [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
          Length = 358

 Score =  108 bits (272), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 43/146 (29%), Positives = 62/146 (42%), Gaps = 23/146 (15%)

Query: 8   MSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           M  ALE A  A      P   VG+V V +N+I+    +          HAEI AIRM   
Sbjct: 1   MKLALENA-KAMKGQTTPNPLVGSVIVNDNRIVGVGAHMKAGE----PHAEIHAIRMAG- 54

Query: 65  ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
               E      +YVTLEPC+       CA AI  A I+++     +P       G +   
Sbjct: 55  ----EQARGATIYVTLEPCSHYGRTGPCAEAIVQAGIKKVVVATLDPNPLVSGRGIKILQ 110

Query: 119 LATCHHSPEIYPGISEQRSRQIIQDF 144
            A      E+  G+ E+ S+++ + F
Sbjct: 111 DAG----IEVLVGVCEEESKKMNEVF 132


>gi|254372095|ref|ZP_04987588.1| hypothetical protein FTCG_01236 [Francisella tularensis subsp.
           novicida GA99-3549]
 gi|151569826|gb|EDN35480.1| hypothetical protein FTCG_01236 [Francisella novicida GA99-3549]
          Length = 355

 Score =  108 bits (272), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 36/154 (23%), Positives = 56/154 (36%), Gaps = 22/154 (14%)

Query: 1   MKK-GNVFMSCALEEAQNAALR--NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57
           MK     +M  AL  A    L       VG + V N  IIS   +         AHAE+ 
Sbjct: 1   MKNIDKYYMQQALTLANRGRLTVSPNPMVGCIIVKNGAIISEGWHETVGE----AHAEVH 56

Query: 58  AIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIE 111
           A+                 YVTLEPC        C   I  A I+++     +P      
Sbjct: 57  ALIKVGDKA-----KGATAYVTLEPCCHHGRTPPCTDTIIKAGIKKVIIATLDPNPKVAG 111

Query: 112 NGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
            G +       +    +  G+ E++++++ + FF
Sbjct: 112 KGVERLK----NAGITVEVGLLEKQAQELNKIFF 141


>gi|118496729|ref|YP_897779.1| pyrimidine reductase/pyrimidine deaminase [Francisella tularensis
           subsp. novicida U112]
 gi|194324036|ref|ZP_03057811.1| riboflavin biosynthesis protein RibD [Francisella tularensis subsp.
           novicida FTE]
 gi|208780000|ref|ZP_03247343.1| riboflavin biosynthesis protein RibD [Francisella novicida FTG]
 gi|118422635|gb|ABK89025.1| pyrimidine reductase/pyrimidine deaminase [Francisella novicida
           U112]
 gi|194321933|gb|EDX19416.1| riboflavin biosynthesis protein RibD [Francisella tularensis subsp.
           novicida FTE]
 gi|208744004|gb|EDZ90305.1| riboflavin biosynthesis protein RibD [Francisella novicida FTG]
          Length = 355

 Score =  108 bits (272), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 36/154 (23%), Positives = 56/154 (36%), Gaps = 22/154 (14%)

Query: 1   MKK-GNVFMSCALEEAQNAALR--NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57
           MK     +M  AL  A    L       VG + V N  IIS   +         AHAE+ 
Sbjct: 1   MKNIDKYYMQQALTLANRGRLTVSPNPMVGCIIVKNGAIISEGWHETVGE----AHAEVH 56

Query: 58  AIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIE 111
           A+                 YVTLEPC        C   I  A I+++     +P      
Sbjct: 57  ALIKVGDKA-----KGATAYVTLEPCCHHGRTPPCTDTIIKAGIKKVIIATLDPNPKVAG 111

Query: 112 NGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
            G +       +    +  G+ E++++++ + FF
Sbjct: 112 KGVERLK----NAGITVEVGLLEKQAQELNKIFF 141


>gi|39996788|ref|NP_952739.1| riboflavin biosynthesis protein RibD [Geobacter sulfurreducens PCA]
 gi|39983676|gb|AAR35066.1| riboflavin biosynthesis protein RibD [Geobacter sulfurreducens PCA]
 gi|307634902|gb|ADI84522.2| 2,5-diamino-6-(5'-phosphoribosylamino)-4-(3H)-pyrimidinone
           deaminase and 5-amino-6-(5'-phosphoribosylamino)uracil
           reductase [Geobacter sulfurreducens KN400]
          Length = 369

 Score =  108 bits (272), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 37/150 (24%), Positives = 57/150 (38%), Gaps = 23/150 (15%)

Query: 4   GNVFMSCALEEAQNAALR---NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
               M  AL  A+    +   N + VG V V    ++    +R    K  T HAE+ A+R
Sbjct: 5   HENMMRRALSLARKGIGKTSPNPV-VGCVIVREGVVVGEGWHR----KAGTPHAEVHALR 59

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
                    +    D+YVTLEPC        CA A+  A + R++ G  +P       G 
Sbjct: 60  EAG-----PLARGADVYVTLEPCSHFGRTPPCADALVAAGVARVFVGMVDPNPTVCGKGI 114

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
                       ++  G+  +  R I + F
Sbjct: 115 TRLEAVG----IQVITGVLGKECRLINEPF 140


>gi|283834269|ref|ZP_06354010.1| riboflavin biosynthesis protein RibD [Citrobacter youngae ATCC
           29220]
 gi|291069791|gb|EFE07900.1| riboflavin biosynthesis protein RibD [Citrobacter youngae ATCC
           29220]
          Length = 367

 Score =  108 bits (272), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 35/155 (22%), Positives = 56/155 (36%), Gaps = 21/155 (13%)

Query: 3   KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +  ++M+ AL+ A       +  P VG V V + +I+    +          HAE+ A+R
Sbjct: 2   QDELYMARALKLAARGRFTTHPNPNVGCVIVKDGEIVGEGYHYRAGE----PHAEVHALR 57

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           M               YVTLEPC        C  A+  A + R+     +P       G 
Sbjct: 58  MAGEKAQ-----GATAYVTLEPCSHHGRTPPCCDALIAAGVSRVVAAMQDPNPQVAGRGL 112

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
                A      ++  G+      Q+ + F K  R
Sbjct: 113 YRLQQAG----IDVSHGLMMSEVEQLNKGFLKRMR 143


>gi|169627158|ref|YP_001700807.1| cytidine/deoxycytidylate deaminase [Mycobacterium abscessus ATCC
           19977]
 gi|169239125|emb|CAM60153.1| Probable cytidine/deoxycytidylate deaminase [Mycobacterium
           abscessus]
          Length = 166

 Score =  108 bits (272), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 26/94 (27%), Positives = 42/94 (44%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           F    ++ A+        P   + V +  +++ + NR  +  D TAHAEILAIR  C  L
Sbjct: 3   FAQRTIDLARRNVEEGGRPFATIIVKDGAVLAESPNRVAQTNDPTAHAEILAIREACTRL 62

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
             E L    +++   PC MC  A+       + +
Sbjct: 63  GTEHLAGSTIFILALPCPMCLGALYYCSPDEVVF 96


>gi|289583345|ref|YP_003481755.1| CMP/dCMP deaminase zinc-binding protein [Natrialba magadii ATCC
           43099]
 gi|289532843|gb|ADD07193.1| CMP/dCMP deaminase zinc-binding protein [Natrialba magadii ATCC
           43099]
          Length = 156

 Score =  108 bits (272), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 33/143 (23%), Positives = 56/143 (39%), Gaps = 1/143 (0%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
                M  A + A+ A  R + P G+V V +N ++  A NR     D+  H E+      
Sbjct: 7   DHEEHMHRAFDLAREAVARGDRPFGSVLVRDNTVVDSASNRVVTEDDIRRHPELHLAYRA 66

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
            R        E+ +Y + EPC MCA  +  A + R+ Y     + G     +     AT 
Sbjct: 67  VRGFDPAGRAELVMYTSTEPCPMCAGGLVSAGLDRIVYSVGGDEIGEFTGDSPAVRAATI 126

Query: 123 HHSP-EIYPGISEQRSRQIIQDF 144
                ++   +  +  R + + F
Sbjct: 127 LKGVTDVVGPVLNEDGRHLHETF 149


>gi|86143346|ref|ZP_01061748.1| guanine deaminase [Leeuwenhoekiella blandensis MED217]
 gi|85830251|gb|EAQ48711.1| guanine deaminase [Leeuwenhoekiella blandensis MED217]
          Length = 149

 Score =  108 bits (272), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 36/136 (26%), Positives = 57/136 (41%), Gaps = 18/136 (13%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGA--------VAVLNNKIISRAGNRNRELKDVTA 52
           +++   F+  A++ A+                    V V +  II+   NR  E  D T 
Sbjct: 3   LQQHKDFLKRAIDWAKRGKAA-------EGGGAFGAVIVKDGSIIAEGHNRVGENTDCTQ 55

Query: 53  HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS--NPK-GGG 109
           HAE+  I+  C+ L  + L    LY + EPC MC  A   A +  +YYGAS  + K  G 
Sbjct: 56  HAELAMIQEACKKLGSKSLKGCILYTSCEPCLMCLGASRWAALDAVYYGASAADAKEAGY 115

Query: 110 IENGTQFYTLATCHHS 125
           + +   + +     H 
Sbjct: 116 VYSQLFYNSHTGKRHQ 131


>gi|307265418|ref|ZP_07546974.1| riboflavin biosynthesis protein RibD [Thermoanaerobacter wiegelii
           Rt8.B1]
 gi|306919532|gb|EFN49750.1| riboflavin biosynthesis protein RibD [Thermoanaerobacter wiegelii
           Rt8.B1]
          Length = 360

 Score =  108 bits (272), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 40/148 (27%), Positives = 62/148 (41%), Gaps = 21/148 (14%)

Query: 5   NVFMSCALEEAQNAAL-RNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
             +M  AL  A+      N  P VGAV V N KII    +          HAE+ A++  
Sbjct: 2   EEYMKRALTLAEKGWGYTNPNPLVGAVIVKNGKIIGEGYHEYFGG----PHAEVNALKNA 57

Query: 63  CRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116
                 E +    ++VTLEPC        C   I  + I+R+Y    +P      NG + 
Sbjct: 58  V-----EDVKGSTMFVTLEPCSHYGKTPPCVEEIIKSGIKRVYIAMEDPNPKVSGNGIKR 112

Query: 117 YTLATCHHSPEIYPGISEQRSRQIIQDF 144
              A      E++ G+ E+ +R++ + F
Sbjct: 113 LKEAG----IEVHVGMMEKDARKLNEIF 136


>gi|330959948|gb|EGH60208.1| riboflavin biosynthesis protein RibD [Pseudomonas syringae pv.
           maculicola str. ES4326]
          Length = 381

 Score =  108 bits (272), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 35/152 (23%), Positives = 55/152 (36%), Gaps = 21/152 (13%)

Query: 4   GNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
              +M+ ALE A+           VG V V + +I+    +          HAE+ A+R 
Sbjct: 12  DVHYMARALELARKGLYSTHPNPRVGCVIVRDGQIVGEGWHARAGE----PHAEVHALRQ 67

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
              +           YVTLEPC        CA A+  A + R+     +P       G  
Sbjct: 68  AGELA-----RGATAYVTLEPCSHQGRTPPCADALVDAGLARVVAAMQDPNPEVSGRGL- 121

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
              L   +    +  G+ E  +R + + F K 
Sbjct: 122 ---LRLMNAGIGVQCGVLESEARALNKGFLKR 150


>gi|302333432|gb|ADL23625.1| bifunctional pyrimidine reductase / riboflavin biosynthesis protein
           [Staphylococcus aureus subsp. aureus JKD6159]
          Length = 343

 Score =  108 bits (272), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 38/150 (25%), Positives = 63/150 (42%), Gaps = 26/150 (17%)

Query: 8   MSCALEEAQNAALRNEI--PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M  A++ A     +  +  PVGAV V   +I+    +  +  K    HAE+ A+ M    
Sbjct: 1   MDYAIQLANMVQGQTGVNPPVGAVVVKEGRIVGIGAHLRKGNK----HAEVQALDMA--- 53

Query: 66  LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
             Q+      +Y+TLEPC        C   I   +I ++ Y   +       N    +  
Sbjct: 54  --QQNAEGATIYITLEPCSHFGSTPPCVNKIIDCKIAKVVYATKD-------NSLDTHGD 104

Query: 120 ATCH-HSPEIYPGISEQRSRQIIQDFFKER 148
            T   H  E+   + ++R+ Q+ QDFFK +
Sbjct: 105 DTLRAHGIEVEC-VDDERASQLYQDFFKAK 133


>gi|86605105|ref|YP_473868.1| riboflavin biosynthesis protein RibD [Synechococcus sp. JA-3-3Ab]
 gi|86553647|gb|ABC98605.1| riboflavin biosynthesis protein RibD [Synechococcus sp. JA-3-3Ab]
          Length = 371

 Score =  108 bits (272), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 38/160 (23%), Positives = 61/160 (38%), Gaps = 30/160 (18%)

Query: 4   GNVFMSCALEEAQNAALRNEIP-----VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
              +M   L  A++   R   P     V  V V  ++++    +          HAE+LA
Sbjct: 6   DRQWMERCLSLARSTPQR---PSPNPRVACVIVRGDQVVGEGVHLGAGQ----PHAEVLA 58

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
           ++    +          LYV LEPC        C  AI  A IRR+  G  +P       
Sbjct: 59  LQQAGSLA-----KGATLYVNLEPCNHYGRTPPCTEAILAAGIRRVVVGMQDPNPLVAGK 113

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDF-FK--ERR 149
           G +    A      E+  G+ EQ  +++ + F F   ++R
Sbjct: 114 GIRRLQEAG----VEVTVGVLEQECQELNEGFAFAIVQKR 149


>gi|71892014|ref|YP_277744.1| pyrimidine deaminase/reductase [Candidatus Blochmannia
           pennsylvanicus str. BPEN]
 gi|71796120|gb|AAZ40871.1| pyrimidine deaminase/reductase [Candidatus Blochmannia
           pennsylvanicus str. BPEN]
          Length = 379

 Score =  108 bits (272), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 40/155 (25%), Positives = 57/155 (36%), Gaps = 23/155 (14%)

Query: 4   GNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
              F++ AL+ A        +P   VG V V NNKII    +         AHAEI A+R
Sbjct: 9   DKRFLTRALQLAWKGRFTT-MPNPNVGCVIVRNNKIIGEGYHIRAGE----AHAEIHALR 63

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           +   +           Y+TLEPC        C  A+  A I+R+     +P       G 
Sbjct: 64  IAGNLAQ-----GATAYITLEPCSHYGRTPPCTTALINAGIKRVVVAMLDPHFYARGRGL 118

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
                A      E+   +    +  I + F K  R
Sbjct: 119 HLLQQAG----IEVQHSLMLPEAESINRGFLKRIR 149


>gi|257467357|ref|ZP_05631668.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Fusobacterium
           gonidiaformans ATCC 25563]
 gi|315918487|ref|ZP_07914727.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase
           [Fusobacterium gonidiaformans ATCC 25563]
 gi|313692362|gb|EFS29197.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase
           [Fusobacterium gonidiaformans ATCC 25563]
          Length = 359

 Score =  108 bits (272), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 43/152 (28%), Positives = 61/152 (40%), Gaps = 21/152 (13%)

Query: 3   KGNVFMSCALEEAQNAALR-NEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +   +M  ALE A++   R N  P VGAV V N KII +  +          HAE+ A++
Sbjct: 2   EDLEYMHLALELAKHGEGRVNPNPLVGAVVVKNGKIIGKGYHHEYGG----PHAEVFALQ 57

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
                   E      +YVTLEPC        CA  I  + I+R      +P       G 
Sbjct: 58  EAG-----EEAKGATIYVTLEPCSHYGKTPPCAKKIIDSGIKRCVISMGDPNPLVGGKGI 112

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
                A      E+  G+ E  +R + + F K
Sbjct: 113 SMMRDAG----IEVEIGLCETEARALNRVFLK 140


>gi|153001671|ref|YP_001367352.1| riboflavin biosynthesis protein RibD [Shewanella baltica OS185]
 gi|151366289|gb|ABS09289.1| riboflavin biosynthesis protein RibD [Shewanella baltica OS185]
          Length = 384

 Score =  108 bits (271), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 37/152 (24%), Positives = 56/152 (36%), Gaps = 21/152 (13%)

Query: 4   GNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
               MS A++ A+      R    VG V V +N+I+    ++         HAE+ A+RM
Sbjct: 11  DTQMMSRAIQLARKGFYTTRPNPSVGCVIVKDNQIVGEGYHQKAGE----PHAEVHALRM 66

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
                  E       YVTLEPC        CA A+    ++R+     +P       G Q
Sbjct: 67  AG-----EHARGATAYVTLEPCSHYGRTPPCAFALINIGVKRVVVAVEDPNPQVAGRGIQ 121

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
               A      E+  G+    +  +   F K 
Sbjct: 122 MLRDAG----IEVDVGLHRDEAYALNLGFMKR 149


>gi|306833066|ref|ZP_07466197.1| riboflavin biosynthesis protein RibD [Streptococcus bovis ATCC
           700338]
 gi|304424775|gb|EFM27910.1| riboflavin biosynthesis protein RibD [Streptococcus bovis ATCC
           700338]
          Length = 351

 Score =  108 bits (271), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 38/145 (26%), Positives = 57/145 (39%), Gaps = 19/145 (13%)

Query: 4   GNVFMSCALEEAQNAALR--NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
              +M+ A+  A+    +      VGAV V N ++I+R  +     +    HAE  AI  
Sbjct: 2   HENYMAQAIAAAKQGFRQIYTNPLVGAVIVKNGRVIARGAHLQYGHE----HAEKNAI-- 55

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
                  E L    LYVTLEPC        C  AI  A I+++  G  +P       G +
Sbjct: 56  -LHCEVPEELANSTLYVTLEPCHHTGKQPPCTQAIVEAGIKKVVVGQLDPNPLVAGKGLE 114

Query: 116 FYTLATCHHSPEIYPGISEQRSRQI 140
           F          E+   + E  +R +
Sbjct: 115 FLKSQG----IEVVTQVLENEARAL 135


>gi|158312920|ref|YP_001505428.1| CMP/dCMP deaminase zinc-binding [Frankia sp. EAN1pec]
 gi|158108325|gb|ABW10522.1| CMP/dCMP deaminase zinc-binding [Frankia sp. EAN1pec]
          Length = 188

 Score =  108 bits (271), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 34/132 (25%), Positives = 49/132 (37%), Gaps = 33/132 (25%)

Query: 3   KGNVFMSCALEEAQNAALRN-EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
                M  A   A  +       P GAV V + +I++R  NR     D TAHAE+ +IR 
Sbjct: 2   NHEELMGEATRLATQSVENGWGGPFGAVIVKDGEIVARGQNRVLLTGDPTAHAEVESIRK 61

Query: 62  GCRILSQE--------------------------------ILPEVDLYVTLEPCTMCAAA 89
             ++L+ E                                +L    +Y    PC MC +A
Sbjct: 62  AIQVLNPEGPTIAPEEQDLATLELVPRPEGSPDRVPKRAKMLMGYSIYTAGIPCPMCMSA 121

Query: 90  ISLARIRRLYYG 101
           I  +RI  +YY 
Sbjct: 122 IYWSRISDVYYA 133


>gi|329929844|ref|ZP_08283520.1| riboflavin biosynthesis protein RibD [Paenibacillus sp. HGF5]
 gi|328935822|gb|EGG32283.1| riboflavin biosynthesis protein RibD [Paenibacillus sp. HGF5]
          Length = 366

 Score =  108 bits (271), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 38/150 (25%), Positives = 59/150 (39%), Gaps = 21/150 (14%)

Query: 3   KGNVFMSCALEEAQNAALRNEI-PV-GAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
               +MS AL+ A+ A  +  I PV G V V +  +     +  R     T HAE+ A+ 
Sbjct: 5   NDEFYMSLALDLAERAQGQTGINPVVGCVVVKDGALAGVGTHLER----GTPHAEVHALN 60

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           M              +YVTLEPC        C+  +    +RR+     +P       G 
Sbjct: 61  MAG-----PKAAGSTVYVTLEPCSHYGATPPCSERLIAKGVRRVVVACEDPNPLVAGRGI 115

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
           Q    A      E+  GI + R+ ++ + F
Sbjct: 116 QMLRAAG----IEVETGILKDRALRLNEAF 141


>gi|311248289|ref|XP_003123051.1| PREDICTED: LOW QUALITY PROTEIN: tRNA-specific adenosine
           deaminase-like protein 3-like [Sus scrofa]
          Length = 351

 Score =  108 bits (271), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 40/173 (23%), Positives = 63/173 (36%), Gaps = 42/173 (24%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLN--NKIISRAGNRNRELKDVTAHAEILAIR--MGC 63
           M  A+  AQ AA R    VGAV V     ++++              HA ++ I      
Sbjct: 177 MERAVWAAQQAASRGLRAVGAVVVDPASGRVLATGH-DCSGTATPLLHAAMVCIDLVAQG 235

Query: 64  RILSQEILP------------------------------------EVDLYVTLEPCTMCA 87
           +      L                                       DLYVT EPC MCA
Sbjct: 236 QGRGTYDLTHHPACSFAPAAAPESVRVGSVRKLEEDMDGLPYVCTGYDLYVTREPCAMCA 295

Query: 88  AAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140
            A+  +R+RR++YGA +P  G +    + +     +H  + + G+ E +  Q+
Sbjct: 296 MALVHSRVRRVFYGAPSPD-GALGTHFRIHARPDLNHRFQAFRGVLEAQCCQL 347


>gi|331005895|ref|ZP_08329246.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase [gamma
           proteobacterium IMCC1989]
 gi|330420291|gb|EGG94606.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase [gamma
           proteobacterium IMCC1989]
          Length = 397

 Score =  108 bits (271), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 42/156 (26%), Positives = 65/156 (41%), Gaps = 22/156 (14%)

Query: 3   KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
             + FMS A++ A+         P VG V V N ++IS   +         AHAEI A++
Sbjct: 6   DDHRFMSLAIQLAEKGRYTTRPNPCVGCVLVKNGQVISEGWHYRAGE----AHAEIHALQ 61

Query: 61  MGCRILSQEILPEVDLYVTLEPCTM------CAAAIS---LARIRRLYYGASNPKGGGIE 111
                +  E +     YVTLEPC+       CA A++      I R+ YG  +P      
Sbjct: 62  QLPIEVKAENI---TAYVTLEPCSHQGRTGSCAMALADRTNTGIIRVVYGMEDPNPLVAG 118

Query: 112 NGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
            G      + C     +   + EQ++  + Q FF+ 
Sbjct: 119 KGLAILRESGC----VVEGPLMEQQAAALNQGFFRR 150


>gi|298293742|ref|YP_003695681.1| CMP/dCMP deaminase zinc-binding protein [Starkeya novella DSM 506]
 gi|296930253|gb|ADH91062.1| CMP/dCMP deaminase zinc-binding protein [Starkeya novella DSM 506]
          Length = 240

 Score =  108 bits (271), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 36/143 (25%), Positives = 50/143 (34%), Gaps = 32/143 (22%)

Query: 6   VFMSCALEEAQNAALRN-EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
            FM  A   A  +  +    P GAV V + +II R  NR         HAEI AI     
Sbjct: 57  KFMEEATRLAIESVEKGWGGPFGAVIVKDGEIIGRGQNRVLLTGIPVFHAEITAIMDASA 116

Query: 65  ILSQE-------------------------------ILPEVDLYVTLEPCTMCAAAISLA 93
            L+ +                               +L   ++Y+   PC MC +AI  +
Sbjct: 117 RLNPKALLGSDYGAGTILEMIPREPGSPDPVPERARMLKGCEIYINGAPCPMCMSAIYWS 176

Query: 94  RIRRLYYGASNPKGGGIENGTQF 116
           RI  +Y+ AS      I     F
Sbjct: 177 RIDHVYFAASLKDTSAIGFDDAF 199


>gi|301381786|ref|ZP_07230204.1| riboflavin biosynthesis protein RibD [Pseudomonas syringae pv.
           tomato Max13]
 gi|302061014|ref|ZP_07252555.1| riboflavin biosynthesis protein RibD [Pseudomonas syringae pv.
           tomato K40]
 gi|302130534|ref|ZP_07256524.1| riboflavin biosynthesis protein RibD [Pseudomonas syringae pv.
           tomato NCPPB 1108]
          Length = 378

 Score =  108 bits (271), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 35/152 (23%), Positives = 56/152 (36%), Gaps = 21/152 (13%)

Query: 4   GNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
              +M+ ALE A+           VG V V + +I+ +  +          HAE+ A+R 
Sbjct: 9   DVHYMAHALELARKGLYSTHPNPRVGCVIVRDGQIVGQGWHARAGE----PHAEVHALRE 64

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
              +           YVTLEPC        CA A+  A + R+     +P      +G  
Sbjct: 65  AGELA-----RGATAYVTLEPCSHQGRTPPCADALISAGLARVVAAMQDPNPQVAGSGLL 119

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
               A       +  G+ E  +R + + F K 
Sbjct: 120 RLMTAG----ISVQCGVLESEARALNKGFIKR 147


>gi|281421474|ref|ZP_06252473.1| riboflavin biosynthesis protein RibD [Prevotella copri DSM 18205]
 gi|281404546|gb|EFB35226.1| riboflavin biosynthesis protein RibD [Prevotella copri DSM 18205]
          Length = 345

 Score =  108 bits (271), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 36/151 (23%), Positives = 55/151 (36%), Gaps = 20/151 (13%)

Query: 4   GNVFMSCALEEAQNAALRN--EIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIR 60
             +FM   L+ A+N          VGAV V  + +II    +          HAE+ A  
Sbjct: 23  DEMFMRRCLQLAKNGRENAKPNPMVGAVIVSGDGRIIGEGYHVRCGEG----HAEVNAF- 77

Query: 61  MGCRILSQEIL-PEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113
                   E L  +  +YV+LEPC        CA  I    ++R   G  +P       G
Sbjct: 78  -ASVKPEDEHLLSQATIYVSLEPCSHYGKTPPCADLIVRKGVKRCVCGCVDPFAKVQGRG 136

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
            +    A      E+  G+ E    ++ + F
Sbjct: 137 IRKIREAG----IEVTVGVLEAECLELNKRF 163


>gi|300175372|emb|CBK20683.2| unnamed protein product [Blastocystis hominis]
          Length = 155

 Score =  108 bits (271), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 37/147 (25%), Positives = 62/147 (42%), Gaps = 18/147 (12%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAG-NRNRELKDVTAHAEILAIRMGCRI 65
           M  A+E  + AAL   +PVG V +  N  I+   G NR     D   H     IR     
Sbjct: 1   MRLAIELGRMAALNGNLPVGMVILDKNGNIMGECGDNRKNMFLD---HCCFAGIRNQSER 57

Query: 66  LS------------QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENG 113
           ++              +  + D+ +T EPC MC   +  +R+RR+ YG  + + G   + 
Sbjct: 58  MNMQLGRKRASKEDPYLCTDYDIIITREPCIMCGMCLLHSRVRRVIYGC-DDRNGCFNSH 116

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQI 140
              +     +H   ++ G+ E + RQ+
Sbjct: 117 IHLHYKEPLNHHFRVFRGVMEAQCRQL 143


>gi|213691299|ref|YP_002321885.1| riboflavin biosynthesis protein RibD [Bifidobacterium longum subsp.
           infantis ATCC 15697]
 gi|213522760|gb|ACJ51507.1| riboflavin biosynthesis protein RibD [Bifidobacterium longum subsp.
           infantis ATCC 15697]
 gi|320457366|dbj|BAJ67987.1| riboflavin biosynthesis protein [Bifidobacterium longum subsp.
           infantis ATCC 15697]
          Length = 366

 Score =  108 bits (271), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 39/150 (26%), Positives = 57/150 (38%), Gaps = 21/150 (14%)

Query: 3   KGNVFMSCALEEAQN-AALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
               +M  A+E A+  A   N  P VGAV V +++II +  +          HAE  A+R
Sbjct: 2   DDAQYMGLAIELAKRGAGYVNPNPMVGAVIVKDDRIIGQGYHEMFGGL----HAERNALR 57

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
                   +      LYVTLEPC        C  AI  + I R+  G  +        G 
Sbjct: 58  -----HCTQSPAGATLYVTLEPCCHYGKTPPCTEAIVESGIARVVVGTLDCNPVVSGKGV 112

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
           +        H   +  G+     R +I+ F
Sbjct: 113 RMLED----HGIRVDVGVLADECRHLIRVF 138


>gi|188584764|ref|YP_001916309.1| riboflavin biosynthesis protein RibD [Natranaerobius thermophilus
           JW/NM-WN-LF]
 gi|179349451|gb|ACB83721.1| riboflavin biosynthesis protein RibD [Natranaerobius thermophilus
           JW/NM-WN-LF]
          Length = 380

 Score =  108 bits (271), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 37/152 (24%), Positives = 60/152 (39%), Gaps = 21/152 (13%)

Query: 1   MKKGNVFMSCALEEAQNAA-LRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           +KK   +M  AL+ A       N  P VGAV V N+ I+++  +          HAE +A
Sbjct: 5   IKKDRQYMDRALDLAWKGWGKTNPNPLVGAVLVKNDDIVAQGYHGRLGG----PHAEAVA 60

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
           +    R           +YVTLEPC        C   I  A ++R+   + +P       
Sbjct: 61  LEKAGREA-----SGTTMYVTLEPCCHYGKTPPCTDKIIEAGVKRVVIASLDPHEKMAGK 115

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
           G +    A      E+  G+ +  + +  + F
Sbjct: 116 GVKKLRQAGI--KVEV--GLKKAEAEKQNEIF 143


>gi|206971231|ref|ZP_03232182.1| riboflavin biosynthesis protein RibD [Bacillus cereus AH1134]
 gi|206734003|gb|EDZ51174.1| riboflavin biosynthesis protein RibD [Bacillus cereus AH1134]
          Length = 370

 Score =  108 bits (271), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 35/158 (22%), Positives = 62/158 (39%), Gaps = 24/158 (15%)

Query: 3   KGNVFMSCALEEAQ-NAALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
               +M  AL+ A+  +   +  P VGAV V +  I+    +     +    HAE+ A++
Sbjct: 2   TDQEYMRIALQLAEGTSGQTSPNPMVGAVVVKDGNIVGMGAHLRAGEE----HAEVHALQ 57

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           M  +        +  +YVTLEPC        C   +    ++R+     +       NG 
Sbjct: 58  MAGQ-----NAKDATVYVTLEPCSHFGKTPPCCELLIEKGVKRVVIATLDCNPLVSGNGK 112

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF---KERR 149
           +    A      E+  G+ E  +  + + FF   K +R
Sbjct: 113 RRLEEA----RIEVTTGVLEAEAVLLNRYFFHYMKTKR 146


>gi|91216505|ref|ZP_01253471.1| riboflavin biosynthesis protein ribD [Psychroflexus torquis ATCC
           700755]
 gi|91185299|gb|EAS71676.1| riboflavin biosynthesis protein ribD [Psychroflexus torquis ATCC
           700755]
          Length = 347

 Score =  108 bits (271), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 42/158 (26%), Positives = 64/158 (40%), Gaps = 21/158 (13%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57
           MK    ++   LE A N       P   VG V V N++II    +   +  D   HAE+ 
Sbjct: 1   MKTNEFYIKRCLELAANGLGTT-YPNPLVGCVIVYNDRIIGEGWH--IKAGD--DHAEVR 55

Query: 58  AIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIE 111
           AI     +  Q +L +  LYVTLEPC        C+  I   +I ++  G  +P      
Sbjct: 56  AINS---VKDQSLLKKSILYVTLEPCSHYGKTPPCSDLIIEKKIPKIVIGTLDPFAKVAG 112

Query: 112 NGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
            G +    A       +  G+ E+   ++ + FF   R
Sbjct: 113 MGIKKLLAA----KRSVTVGVCEEACEELNKRFFTFHR 146


>gi|168181552|ref|ZP_02616216.1| riboflavin biosynthesis protein RibD [Clostridium botulinum Bf]
 gi|237796324|ref|YP_002863876.1| riboflavin biosynthesis protein RibD [Clostridium botulinum Ba4
           str. 657]
 gi|182674971|gb|EDT86932.1| riboflavin biosynthesis protein RibD [Clostridium botulinum Bf]
 gi|229264059|gb|ACQ55092.1| riboflavin biosynthesis protein RibD [Clostridium botulinum Ba4
           str. 657]
          Length = 365

 Score =  108 bits (271), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 39/156 (25%), Positives = 59/156 (37%), Gaps = 25/156 (16%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56
           M+  N +M   L+ A+      ++   P VGA+ V NNKII    ++         HAE+
Sbjct: 1   MEDYNFYMEKTLKLAERG--EGKVNPNPKVGAIVVKNNKIIGEGYHKYFGG----PHAEV 54

Query: 57  LAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGI 110
            A+R               +YVTLEPC        CA  I    I +      +P     
Sbjct: 55  YALREAGEKA-----KGATIYVTLEPCSHYGKTPPCAEYIVKMGISKAIIAMKDPNPLVE 109

Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
             G             E+   I E+ S+++ + F K
Sbjct: 110 GRGIDILKQNG----IEVVTEIMEKESKKLNEVFIK 141


>gi|229152312|ref|ZP_04280505.1| RibD (Riboflavin-specific deaminase) [Bacillus cereus m1550]
 gi|228631274|gb|EEK87910.1| RibD (Riboflavin-specific deaminase) [Bacillus cereus m1550]
          Length = 379

 Score =  108 bits (271), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 35/158 (22%), Positives = 62/158 (39%), Gaps = 24/158 (15%)

Query: 3   KGNVFMSCALEEAQ-NAALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
               +M  AL+ A+  +   +  P VGAV V +  I+    +     +    HAE+ A++
Sbjct: 11  TDQEYMRIALQLAEGTSGQTSPNPMVGAVVVKDGNIVGMGAHLRAGEE----HAEVHALQ 66

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           M  +        +  +YVTLEPC        C   +    ++R+     +       NG 
Sbjct: 67  MAGQ-----NAKDATVYVTLEPCSHFGKTPPCCELLIEKGVKRVVIATLDCNPLVSGNGK 121

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF---KERR 149
           +    A      E+  G+ E  +  + + FF   K +R
Sbjct: 122 RRLEEA----RIEVTTGVLEAEAVLLNRYFFHYMKTKR 155


>gi|326800779|ref|YP_004318598.1| riboflavin biosynthesis protein RibD [Sphingobacterium sp. 21]
 gi|326551543|gb|ADZ79928.1| riboflavin biosynthesis protein RibD [Sphingobacterium sp. 21]
          Length = 348

 Score =  108 bits (271), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 37/157 (23%), Positives = 65/157 (41%), Gaps = 22/157 (14%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56
           M    ++M   LE A+    +  +   P VGA+ V ++ II    +R        AHAE 
Sbjct: 1   MPNHEIYMRRCLELAELG--QGSVSPNPIVGALVVHHDTIIGEGWHRKYGE----AHAEP 54

Query: 57  LAIRMGCRILSQ--EILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGG 108
            AI           ++L E  +YVTLEPC        CA  +   +++++    ++P   
Sbjct: 55  NAIADVFNRYPNAADLLRESTVYVTLEPCSHHGKTPPCADLLIKHQVKQVVVACNDPFEQ 114

Query: 109 GIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
               G      A      ++  G+ E+ ++ + + FF
Sbjct: 115 VNGRGIAKLREAG----IDVLEGVLEEEAKFVNRRFF 147


>gi|126030525|pdb|2G6V|A Chain A, The Crystal Structure Of Ribd From Escherichia Coli
 gi|126030526|pdb|2G6V|B Chain B, The Crystal Structure Of Ribd From Escherichia Coli
 gi|134105114|pdb|2OBC|A Chain A, The Crystal Structure Of Ribd From Escherichia Coli In
           Complex With A Substrate Analogue, Ribose 5-Phosphate
           (Beta Form), Bound To The Active Site Of The Reductase
           Domain
 gi|134105115|pdb|2OBC|B Chain B, The Crystal Structure Of Ribd From Escherichia Coli In
           Complex With A Substrate Analogue, Ribose 5-Phosphate
           (Beta Form), Bound To The Active Site Of The Reductase
           Domain
          Length = 402

 Score =  108 bits (271), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 34/155 (21%), Positives = 56/155 (36%), Gaps = 21/155 (13%)

Query: 3   KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +   + + AL+ AQ      +  P VG V V + +I+    ++         HAE+ A+R
Sbjct: 29  QDEYYXARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGE----PHAEVHALR 84

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
                           YVTLEPC        C  A+  A + R+     +P       G 
Sbjct: 85  XAGEKA-----KGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVASXQDPNPQVAGRGL 139

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
                A      ++  G+    + Q+ + F K  R
Sbjct: 140 YRLQQAG----IDVSHGLXXSEAEQLNKGFLKRXR 170


>gi|34810500|pdb|1OX7|A Chain A, Crystal Structure Of Yeast Cytosine Deaminase Apo-Enzyme:
           Inorganic Zinc Bound
 gi|34810501|pdb|1OX7|B Chain B, Crystal Structure Of Yeast Cytosine Deaminase Apo-Enzyme:
           Inorganic Zinc Bound
          Length = 161

 Score =  108 bits (271), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 36/143 (25%), Positives = 57/143 (39%), Gaps = 13/143 (9%)

Query: 9   SCALEEAQNAALRNEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
             A EEA        +P+G   +   +  ++ R  N   +    T H EI  +    R+ 
Sbjct: 19  DIAYEEAALGYKEGGVPIGGCLINNKDGSVLGRGHNXRFQKGSATLHGEISTLENCGRLE 78

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS-NPKGGGIENGTQFYTLATCHHS 125
             ++  +  LY TL PC  C  AI    I R   G + N K  G +       L T  H 
Sbjct: 79  G-KVYKDTTLYTTLSPCDXCTGAIIXYGIPRCVVGENVNFKSKGEK------YLQTRGHE 131

Query: 126 PEIYPGISEQRSRQIIQDFFKER 148
             +   + ++R ++I + F  ER
Sbjct: 132 VVV---VDDERCKKIXKQFIDER 151


>gi|228909942|ref|ZP_04073763.1| RibD (Riboflavin-specific deaminase) [Bacillus thuringiensis IBL
           200]
 gi|228849777|gb|EEM94610.1| RibD (Riboflavin-specific deaminase) [Bacillus thuringiensis IBL
           200]
          Length = 379

 Score =  108 bits (271), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 35/158 (22%), Positives = 62/158 (39%), Gaps = 24/158 (15%)

Query: 3   KGNVFMSCALEEAQ-NAALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
               +M  AL+ A+  +   +  P VGAV V +  I+    +     +    HAE+ A++
Sbjct: 11  TDQEYMRIALQLAEGTSGQTSPNPMVGAVVVKDGNIVGMGAHLRAGEE----HAEVHALQ 66

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           M  +        +  +YVTLEPC        C   +    ++R+     +       NG 
Sbjct: 67  MAGQ-----NAKDATVYVTLEPCSHFGKTPPCCELLIEKGVKRVVIATLDCNPLVSGNGK 121

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF---KERR 149
           +    A      E+  G+ E  +  + + FF   K +R
Sbjct: 122 RRLEEA----RIEVTTGVLEAEAVLLNRYFFHYMKTKR 155


>gi|319427244|gb|ADV55318.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino) uracil
           reductase, RibD [Shewanella putrefaciens 200]
          Length = 384

 Score =  108 bits (271), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 38/152 (25%), Positives = 56/152 (36%), Gaps = 21/152 (13%)

Query: 4   GNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
               MS A++ A+      R    VG V V +N+II    ++         HAE+ A+RM
Sbjct: 11  DIQMMSRAIQLARKGFYTTRPNPSVGCVIVKDNQIIGEGYHQKAGE----PHAEVHALRM 66

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
                  E       YVTLEPC        CA A+    ++R+     +P       G Q
Sbjct: 67  AG-----ERARGATAYVTLEPCSHYGRTPPCALALINIGVKRVVVAVEDPNPQVGGRGIQ 121

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
               A      E+  G+    +  +   F K 
Sbjct: 122 MLRDAG----IEVDVGLHRDEAYALNLGFMKR 149


>gi|50083525|ref|YP_045035.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Acinetobacter sp. ADP1]
 gi|49529501|emb|CAG67213.1| bifunctional protein [Includes:
           diaminohydroxyphosphoribosylaminopyrimidine deaminase
           (Riboflavin-specific deaminase);
           5-amino-6-(5-phosphoribosylamino)uracil reductase (HTP
           reductase) ] [Acinetobacter sp. ADP1]
          Length = 362

 Score =  108 bits (271), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 37/153 (24%), Positives = 61/153 (39%), Gaps = 21/153 (13%)

Query: 2   KKGNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
           ++ + +MS AL  A+ A    R    VG V V +  I+ R             HAE+ A+
Sbjct: 5   ERDHYWMSQALALAKTAQFRTRPNPAVGCVIVKDQHIVGRGSTAPVGG----PHAEVFAL 60

Query: 60  RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113
           R                YVTLEPC        CA A+  A + R+     +P       G
Sbjct: 61  REAGVQAQN-----ATAYVTLEPCSHYGRTPPCANALIEAGVSRVVIATLDPNPLVAGKG 115

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
                 A    + ++  G+ E++++++ + F K
Sbjct: 116 QTMLNQAGI--TTQV--GVLEEQAQELNRGFLK 144


>gi|254442809|ref|ZP_05056285.1| Cytidine and deoxycytidylate deaminase zinc-binding region domain
           protein [Verrucomicrobiae bacterium DG1235]
 gi|198257117|gb|EDY81425.1| Cytidine and deoxycytidylate deaminase zinc-binding region domain
           protein [Verrucomicrobiae bacterium DG1235]
          Length = 151

 Score =  108 bits (271), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 41/149 (27%), Positives = 61/149 (40%), Gaps = 21/149 (14%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57
           +++   FM  A+ EA         P   VGAV V + +I+++        +D   HAE  
Sbjct: 4   IQRDESFMRAAVCEAVRGDAVKTSPNPRVGAVIVEDGEIVAKGH----FERDGGPHAERQ 59

Query: 58  AIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIE 111
           A+    R           +YVTLEPC+       C  AI  A IRR+  GAS+P      
Sbjct: 60  ALEALGRKPK----EGAVIYVTLEPCSTQGRTGACTDAILEAGIRRVVVGASDPTEEHRG 115

Query: 112 NGTQFYTLATCHHSPEIYPGISEQRSRQI 140
           NG +    A      E+  G+ +     +
Sbjct: 116 NGVRVLEAAG----VEVVSGVLDLECSAL 140


>gi|289432876|ref|YP_003462749.1| riboflavin biosynthesis protein RibD [Dehalococcoides sp. GT]
 gi|288946596|gb|ADC74293.1| riboflavin biosynthesis protein RibD [Dehalococcoides sp. GT]
          Length = 365

 Score =  108 bits (271), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 38/151 (25%), Positives = 66/151 (43%), Gaps = 25/151 (16%)

Query: 6   VFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
            +MS AL  A+ A    ++   P VGAV V N +++ +   +     D   HAEI+A++ 
Sbjct: 2   KYMSQALSLAKLA--IGQVSPNPSVGAVIVKNGEVVGQGFTQP-PGGD---HAEIVALKQ 55

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
                         LYVTLEPC        C  ++  + I+ +Y    +        G +
Sbjct: 56  AAEKA-----KGATLYVTLEPCCHQGRTPPCTGSVIASGIKEVYIATLDDNPLVSGKGKK 110

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
               A      +++ G+ E+ +RQ+ + +FK
Sbjct: 111 ELEAAG----IKVHLGMMEREARQMNEAYFK 137


>gi|227327505|ref|ZP_03831529.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Pectobacterium carotovorum subsp. carotovorum
           WPP14]
          Length = 378

 Score =  108 bits (271), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 37/155 (23%), Positives = 57/155 (36%), Gaps = 21/155 (13%)

Query: 3   KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +  ++M+ ALE A+         P VG V V + +I+    +          HAE+ A+R
Sbjct: 12  QDELYMARALELARRGCFTTAPNPNVGCVIVRDGEIVGEGYHFRAGE----PHAEVHALR 67

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           M       E       YVTLEPC        CA A+  A + R+     +P       G 
Sbjct: 68  MAG-----ERARGATAYVTLEPCSHHGRTPPCADALITAGVSRVVAAMQDPNPQVAGRGL 122

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
                A       +  G+    + ++   F K  R
Sbjct: 123 HRLQQAG----IAVSHGLMMAEAEKVNVGFLKRMR 153


>gi|296504605|ref|YP_003666305.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Bacillus
           thuringiensis BMB171]
 gi|296325657|gb|ADH08585.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Bacillus
           thuringiensis BMB171]
          Length = 370

 Score =  108 bits (271), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 35/158 (22%), Positives = 62/158 (39%), Gaps = 24/158 (15%)

Query: 3   KGNVFMSCALEEAQ-NAALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
               +M  AL+ A+  +   +  P VGAV V +  I+    +     +    HAE+ A++
Sbjct: 2   TDQEYMRIALQLAEGTSGQTSPNPMVGAVVVKDGNIVGMGAHLRAGEE----HAEVHALQ 57

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           M  +        +  +YVTLEPC        C   +    ++R+     +       NG 
Sbjct: 58  MAGQ-----NAKDATVYVTLEPCSHFGKTPPCCELLIEKGVKRVVIATLDCNPLVSGNGK 112

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF---KERR 149
           +    A      E+  G+ E  +  + + FF   K +R
Sbjct: 113 RRLEEA----RIEVTTGVLEAEAVLLNRYFFHYMKTKR 146


>gi|212702196|ref|ZP_03310324.1| hypothetical protein DESPIG_00207 [Desulfovibrio piger ATCC 29098]
 gi|212674401|gb|EEB34884.1| hypothetical protein DESPIG_00207 [Desulfovibrio piger ATCC 29098]
          Length = 380

 Score =  108 bits (271), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 38/146 (26%), Positives = 57/146 (39%), Gaps = 19/146 (13%)

Query: 7   FMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           FM  AL  A+N        P VGAV V + ++++R  +          HAE+  +R   R
Sbjct: 9   FMREALTLAENGRWSACPNPTVGAVLVRDGQVVARGWHH--AAGQP--HAEVECLRDAQR 64

Query: 65  ILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
                   +  L VTLEPC        C+ A+  A I+R+  G  +P         +   
Sbjct: 65  QGIDP--AQCTLVVTLEPCNHYGKTPPCSEAVLAAGIKRVVIGLYDPTPKAAGGAERLRA 122

Query: 119 LATCHHSPEIYPGISEQRSRQIIQDF 144
                   E+   + EQ  R  + DF
Sbjct: 123 A-----GVEVIGPVCEQECRDQVADF 143


>gi|298529749|ref|ZP_07017152.1| riboflavin biosynthesis protein RibD [Desulfonatronospira
           thiodismutans ASO3-1]
 gi|298511185|gb|EFI35088.1| riboflavin biosynthesis protein RibD [Desulfonatronospira
           thiodismutans ASO3-1]
          Length = 371

 Score =  108 bits (271), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 42/152 (27%), Positives = 62/152 (40%), Gaps = 19/152 (12%)

Query: 1   MKKGNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           M +   FM  AL  A+ A         VGA+    ++I+ +  +R         HAE+ A
Sbjct: 1   MNQSE-FMLKALGLARQAKGFTAPNPCVGALVTCGDRIMGKGWHRAPGEN----HAEVEA 55

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
           I       +   L    +YVTLEPC        C AA+  A I  +  GA +P       
Sbjct: 56  IENA--RENGADLSSCRMYVTLEPCNHHGRTPPCTAAVIQAGIPEIIIGARDPNSQVQGG 113

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
           G +F      +H   +  G+ EQ+   +I DF
Sbjct: 114 GAEFLR----NHGLRVTVGVEEQKCLDLIADF 141


>gi|146293872|ref|YP_001184296.1| riboflavin biosynthesis protein RibD [Shewanella putrefaciens
           CN-32]
 gi|145565562|gb|ABP76497.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Shewanella putrefaciens CN-32]
          Length = 384

 Score =  108 bits (271), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 38/152 (25%), Positives = 56/152 (36%), Gaps = 21/152 (13%)

Query: 4   GNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
               MS A++ A+      R    VG V V +N+II    ++         HAE+ A+RM
Sbjct: 11  DIQMMSRAIQLARKGFYTTRPNPSVGCVIVKDNQIIGEGYHQKAGE----PHAEVHALRM 66

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
                  E       YVTLEPC        CA A+    ++R+     +P       G Q
Sbjct: 67  AG-----ERARGATAYVTLEPCSHYGRTPPCALALINIGVKRVVVAVEDPNPQVGGRGIQ 121

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
               A      E+  G+    +  +   F K 
Sbjct: 122 MLRDAG----IEVDVGLHRDEAYALNLGFMKR 149


>gi|217076388|ref|YP_002334104.1| riboflavin biosynthesis protein RibD [Thermosipho africanus TCF52B]
 gi|217036241|gb|ACJ74763.1| riboflavin biosynthesis protein RibD [Thermosipho africanus TCF52B]
          Length = 343

 Score =  108 bits (270), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 37/152 (24%), Positives = 58/152 (38%), Gaps = 25/152 (16%)

Query: 5   NVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
             FM  AL+ A+       +   P VGAV V + KIIS   ++         HAE  AI 
Sbjct: 2   EKFMKLALKLAKKG--TGRVSPNPLVGAVIVKDGKIISTGYHKRYGD----FHAERNAIL 55

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
                  +  L    L+V LEPC        C   I  ++I +++    +P       G 
Sbjct: 56  NA-----KTSLEGSTLFVNLEPCCHHGKTPPCTDLIIKSKISQVFISILDPNPLVNGKGV 110

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
                       E++ G+ E+ +  + + F K
Sbjct: 111 DILRKNG----IEVHVGLLEKEASYLNRVFIK 138


>gi|300812786|ref|ZP_07093184.1| riboflavin biosynthesis protein RibD [Lactobacillus delbrueckii
           subsp. bulgaricus PB2003/044-T3-4]
 gi|300496238|gb|EFK31362.1| riboflavin biosynthesis protein RibD [Lactobacillus delbrueckii
           subsp. bulgaricus PB2003/044-T3-4]
          Length = 351

 Score =  108 bits (270), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 35/148 (23%), Positives = 58/148 (39%), Gaps = 20/148 (13%)

Query: 1   MKKGNVFMSCALEEAQNAALR--NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           M     +M  A+  A+ A         VG+  V + K+++   +++        HAE   
Sbjct: 1   MASDEEYMRLAIAAARKAGNATWRNPRVGSCLVKDGKVLATGFHQHYGG----FHAERDT 56

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
           I      L+ E L    +YVTLEPC        C   I  + I+R+  GA++P       
Sbjct: 57  I----SKLTPEQLSNSTIYVTLEPCCHYGKQPPCTQLIIDSGIKRVVVGATDPHSLVTGK 112

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQI 140
           G      A      E+  G+  + + Q+
Sbjct: 113 GIAALRQAGL----EVSTGLLAKEASQL 136


>gi|77919046|ref|YP_356861.1| riboflavin biosynthesis protein RibD [Pelobacter carbinolicus DSM
           2380]
 gi|77545129|gb|ABA88691.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase /
           diaminohydroxyphosphoribosylaminopyrimidine deaminase
           [Pelobacter carbinolicus DSM 2380]
          Length = 371

 Score =  108 bits (270), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 44/148 (29%), Positives = 64/148 (43%), Gaps = 21/148 (14%)

Query: 5   NVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
             FM  A++ A+    R      VGA+ V + +I+ R  +     K    HAEI A+R  
Sbjct: 6   ENFMRQAIDLARRGEGRTRPNPAVGALIVKDGEIVGRGFH----PKAGQPHAEIYALREA 61

Query: 63  CRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQF 116
                 +     D+YVTLEPC+       CA AI  A + R+Y G  +P       G + 
Sbjct: 62  G-----DRARGADMYVTLEPCSHHGRTGPCADAIIEAGLARVYVGTLDPNPQVAGGGIRK 116

Query: 117 YTLATCHHSPEIYPGISEQRSRQIIQDF 144
              A      E++ G+ E   R+II  F
Sbjct: 117 LQGAG----IEVHCGVLENLCRRIIAPF 140


>gi|30022196|ref|NP_833827.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Bacillus
           cereus ATCC 14579]
 gi|228960377|ref|ZP_04122030.1| RibD (Riboflavin-specific deaminase) [Bacillus thuringiensis
           serovar pakistani str. T13001]
 gi|229111585|ref|ZP_04241136.1| RibD (Riboflavin-specific deaminase) [Bacillus cereus Rock1-15]
 gi|229129391|ref|ZP_04258362.1| RibD (Riboflavin-specific deaminase) [Bacillus cereus BDRD-Cer4]
 gi|29897753|gb|AAP11028.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase [Bacillus
           cereus ATCC 14579]
 gi|228653996|gb|EEL09863.1| RibD (Riboflavin-specific deaminase) [Bacillus cereus BDRD-Cer4]
 gi|228671967|gb|EEL27260.1| RibD (Riboflavin-specific deaminase) [Bacillus cereus Rock1-15]
 gi|228799401|gb|EEM46365.1| RibD (Riboflavin-specific deaminase) [Bacillus thuringiensis
           serovar pakistani str. T13001]
          Length = 379

 Score =  108 bits (270), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 35/158 (22%), Positives = 62/158 (39%), Gaps = 24/158 (15%)

Query: 3   KGNVFMSCALEEAQ-NAALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
               +M  AL+ A+  +   +  P VGAV V +  I+    +     +    HAE+ A++
Sbjct: 11  TDQEYMRIALQLAEGTSGQTSPNPMVGAVVVKDGNIVGMGAHLRAGEE----HAEVHALQ 66

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           M  +        +  +YVTLEPC        C   +    ++R+     +       NG 
Sbjct: 67  MAGQ-----NAKDATVYVTLEPCSHFGKTPPCCELLIEKGVKRVVIATLDCNPLVSGNGK 121

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF---KERR 149
           +    A      E+  G+ E  +  + + FF   K +R
Sbjct: 122 RRLEEA----RIEVTTGVLEAEAVLLNRYFFHYMKTKR 155


>gi|257063444|ref|YP_003143116.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase
           /5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Slackia heliotrinireducens DSM 20476]
 gi|256791097|gb|ACV21767.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase
           /5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Slackia heliotrinireducens DSM 20476]
          Length = 371

 Score =  108 bits (270), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 41/153 (26%), Positives = 55/153 (35%), Gaps = 21/153 (13%)

Query: 1   MKKGNVFMSCALEEAQNAAL-RNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           M      M  A+E A+ AA   N  P VGAV V + ++I    +          HAE  A
Sbjct: 1   MTADEKMMRRAIELARTAAGWTNPNPLVGAVIVKDGRVIGEGCHERYGDL----HAERNA 56

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
           +         E      +YVTLEPC        CA A+  A I R+  G+ +P       
Sbjct: 57  L-----ASCTESPQGATMYVTLEPCSHTGKQPPCADALVEAGIARVVVGSRDPNPLVSGR 111

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
           G      A      ++      Q    I   FF
Sbjct: 112 GIARLRAAG----IQVEEDFLRQECDGINPVFF 140


>gi|120598057|ref|YP_962631.1| riboflavin biosynthesis protein RibD [Shewanella sp. W3-18-1]
 gi|120558150|gb|ABM24077.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Shewanella sp. W3-18-1]
          Length = 384

 Score =  108 bits (270), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 38/152 (25%), Positives = 56/152 (36%), Gaps = 21/152 (13%)

Query: 4   GNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
               MS A++ A+      R    VG V V +N+II    ++         HAE+ A+RM
Sbjct: 11  DIQMMSRAIQLARKGFYTTRPNPSVGCVIVKDNQIIGEGYHQKAGE----PHAEVHALRM 66

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
                  E       YVTLEPC        CA A+    ++R+     +P       G Q
Sbjct: 67  AG-----ERARGATAYVTLEPCSHYGRTPPCALALINIGVKRVVVAVEDPNPQVGGRGIQ 121

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
               A      E+  G+    +  +   F K 
Sbjct: 122 MLRDAG----IEVDVGLHRDEAYALNLGFMKR 149


>gi|117925508|ref|YP_866125.1| CMP/dCMP deaminase, zinc-binding [Magnetococcus sp. MC-1]
 gi|117609264|gb|ABK44719.1| CMP/dCMP deaminase, zinc-binding protein [Magnetococcus sp. MC-1]
          Length = 150

 Score =  108 bits (270), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 50/144 (34%), Positives = 73/144 (50%), Gaps = 19/144 (13%)

Query: 12  LEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEI 70
           L +A +AA R E+PVGA+       ++S AGN      D  AHAEI+A+R   R LS   
Sbjct: 20  LVQATDAAARGEVPVGALIYAAQGWVVSMAGNGPIGAHDPMAHAEIVAMRCAARRLSNYR 79

Query: 71  LPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYP 130
           L  + + V+LEPC +C  A  LAR++ + Y  +     G ENG            P+I P
Sbjct: 80  LSGLCMVVSLEPCPVCQQATGLARLQSVRYLTAQ----GAENGFV---------RPDITP 126

Query: 131 GISEQRS-----RQIIQDFFKERR 149
            + E R+       +++ FF+ RR
Sbjct: 127 PLQEDRAFMTAGEMMLKIFFEFRR 150


>gi|261405997|ref|YP_003242238.1| riboflavin biosynthesis protein RibD [Paenibacillus sp. Y412MC10]
 gi|261282460|gb|ACX64431.1| riboflavin biosynthesis protein RibD [Paenibacillus sp. Y412MC10]
          Length = 369

 Score =  108 bits (270), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 38/150 (25%), Positives = 59/150 (39%), Gaps = 21/150 (14%)

Query: 3   KGNVFMSCALEEAQNAALRNEI-PV-GAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
               +MS AL+ A+ A  +  I PV G V V +  +     +  R     T HAE+ A+ 
Sbjct: 8   NDEFYMSLALDLAERAQGQTGINPVVGCVVVKDGALAGVGTHLER----GTPHAEVHALN 63

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           M              +YVTLEPC        C+  +    +RR+     +P       G 
Sbjct: 64  MAG-----PKAAGSTVYVTLEPCSHYGATPPCSERLIAEGVRRVVVACEDPNPLVAGRGI 118

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
           Q    A      E+  GI + R+ ++ + F
Sbjct: 119 QMLRAAG----IEVETGILKDRALRLNEAF 144


>gi|148983580|ref|ZP_01816899.1| riboflavin synthase subunit alpha [Streptococcus pneumoniae
           SP3-BS71]
 gi|147923727|gb|EDK74839.1| riboflavin synthase subunit alpha [Streptococcus pneumoniae
           SP3-BS71]
          Length = 360

 Score =  108 bits (270), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 40/145 (27%), Positives = 57/145 (39%), Gaps = 21/145 (14%)

Query: 8   MSCALEEAQN-AALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M  A++ AQ  A   N  P VGA+ V +N II +  +          HAE  A++  CR 
Sbjct: 1   MKLAIKLAQKGAGYVNPNPMVGAIIVKDNHIIGQGYHEFFGG----PHAERNALKN-CRK 55

Query: 66  LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
                     LYVTLEPC        C  AI  + I R+  G+ +        G +    
Sbjct: 56  SP----VGATLYVTLEPCCHFGKTPPCIDAIIDSGITRVVIGSLDCNPIVSGKGVKILEE 111

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDF 144
                  ++  GI E     +I+ F
Sbjct: 112 NNL----QVTVGILENECLNLIKSF 132


>gi|166366741|ref|YP_001659014.1| riboflavin biosynthesis protein [Microcystis aeruginosa NIES-843]
 gi|166089114|dbj|BAG03822.1| riboflavin biosynthesis protein [Microcystis aeruginosa NIES-843]
          Length = 365

 Score =  108 bits (270), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 41/149 (27%), Positives = 52/149 (34%), Gaps = 21/149 (14%)

Query: 4   GNVFMSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
               M   L  A+ A  R    P VGAV V    II    +          HAE+ A+R 
Sbjct: 8   DRTMMQRCLTLARQALGRTSPNPLVGAVIVQEGTIIGEGFH----PGAGQPHAEVFALRQ 63

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
                         LYV LEPC        C+ AI  A I+++  G  +P       G Q
Sbjct: 64  AAEKA-----RGATLYVNLEPCNHYGRTPPCSEAIVQAGIKKVVVGMIDPNPLVAGKGIQ 118

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDF 144
               A      E   G+ E    Q+ Q F
Sbjct: 119 RLESAG----IETLVGVEESECLQLNQGF 143


>gi|296453532|ref|YP_003660675.1| riboflavin biosynthesis protein RibD [Bifidobacterium longum subsp.
           longum JDM301]
 gi|296182963|gb|ADG99844.1| riboflavin biosynthesis protein RibD [Bifidobacterium longum subsp.
           longum JDM301]
          Length = 366

 Score =  108 bits (270), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 39/150 (26%), Positives = 57/150 (38%), Gaps = 21/150 (14%)

Query: 3   KGNVFMSCALEEAQN-AALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
               +M  A+E A+  A   N  P VGAV V +++II +  +          HAE  A+R
Sbjct: 2   DDARYMGLAIELAKRGAGYVNPNPMVGAVIVKDDRIIGQGYHEMFGGL----HAERNALR 57

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
                   +      LYVTLEPC        C  AI  + I R+  G  +        G 
Sbjct: 58  -----HCTQSPAGATLYVTLEPCCHYGKTPPCTEAIVESGIARVVVGTLDCNPVVSGKGV 112

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
           +        H   +  G+     R +I+ F
Sbjct: 113 RMLED----HGIRVDVGVLADECRHLIRVF 138


>gi|329768554|ref|ZP_08260041.1| riboflavin biosynthesis protein RibD [Gemella haemolysans M341]
 gi|328836595|gb|EGF86254.1| riboflavin biosynthesis protein RibD [Gemella haemolysans M341]
          Length = 356

 Score =  108 bits (270), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 40/145 (27%), Positives = 57/145 (39%), Gaps = 19/145 (13%)

Query: 4   GNVFMSCALEEAQNAAL--RNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
              FM+ AL EA+  A        VGA+ V +NKI++R  +          HAE  AI  
Sbjct: 2   HEYFMNLALLEAKRGAKYTHTNPLVGAIIVKDNKIVARGSHLRY----GCEHAEKNAI-- 55

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
                + E +    LYVTLEPC        C  AI    I ++     +P       G +
Sbjct: 56  -STCKTPEKIFNSTLYVTLEPCNHKGKQPPCTEAILKMGISKVVVAQLDPNPIVSGKGIK 114

Query: 116 FYTLATCHHSPEIYPGISEQRSRQI 140
           F          E+  GI E+ +  +
Sbjct: 115 FLRDNG----IEVTTGILEKEAYNL 135


>gi|227113442|ref|ZP_03827098.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Pectobacterium carotovorum subsp.
           brasiliensis PBR1692]
          Length = 378

 Score =  108 bits (270), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 37/155 (23%), Positives = 57/155 (36%), Gaps = 21/155 (13%)

Query: 3   KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +  ++M+ ALE A+         P VG V V + +I+    +          HAE+ A+R
Sbjct: 12  QDELYMARALELARRGCFTTAPNPNVGCVIVRDGEIVGEGYHFRAGE----PHAEVHALR 67

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           M       E       YVTLEPC        CA A+  A + R+     +P       G 
Sbjct: 68  MAG-----ERARGATAYVTLEPCSHHGRTPPCADALITAGVSRVVAAMQDPNPQVAGRGL 122

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
                A       +  G+    + ++   F K  R
Sbjct: 123 HRLQQAG----IAVSHGLMMAEAEKVNVGFLKRMR 153


>gi|146281221|ref|YP_001171374.1| riboflavin biosynthesis protein RibD [Pseudomonas stutzeri A1501]
 gi|145569426|gb|ABP78532.1| riboflavin biosynthesis protein RibD [Pseudomonas stutzeri A1501]
          Length = 359

 Score =  108 bits (270), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 36/148 (24%), Positives = 56/148 (37%), Gaps = 21/148 (14%)

Query: 8   MSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M+ AL+ A+           VG V V + +++    +          HAE+ A+R     
Sbjct: 1   MARALQLARKGLYSTHPNPRVGCVIVADGELVGEGWHVRAGE----PHAEVHALRQAG-- 54

Query: 66  LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
              E       YVTLEPC        CA A+  A + R+     +P      NG +    
Sbjct: 55  ---ERARGATAYVTLEPCSHYGRTPPCAEALVKAGVGRVVAAMQDPNPQVAGNGLERLRS 111

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKE 147
           A      E+  G+ E  +R++   F K 
Sbjct: 112 AG----IEVASGVLEGEARELNAGFIKR 135


>gi|116748817|ref|YP_845504.1| riboflavin biosynthesis protein RibD [Syntrophobacter fumaroxidans
           MPOB]
 gi|116697881|gb|ABK17069.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Syntrophobacter fumaroxidans MPOB]
          Length = 363

 Score =  108 bits (270), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 40/147 (27%), Positives = 54/147 (36%), Gaps = 21/147 (14%)

Query: 8   MSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M  AL  A   A R    P VGAV V     ++   +          HAE+ A+R     
Sbjct: 1   MKRALRLAAKGAGRTSPNPMVGAVVVRGETTVAEGFHEFVGG----PHAEVNALRQAGDK 56

Query: 66  LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
                     LYVTLEPC        C  A+  + +  +  G  +P  G    G  F   
Sbjct: 57  A-----RGATLYVTLEPCNHQGRTPPCTRAVLDSGVATVVIGMEDPNPGVRGGGASFLRS 111

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFK 146
               H   ++ GI E+  R + Q F K
Sbjct: 112 ----HGLRVHAGILEKECRALNQPFIK 134


>gi|229047804|ref|ZP_04193384.1| RibD (Riboflavin-specific deaminase) [Bacillus cereus AH676]
 gi|228723596|gb|EEL74961.1| RibD (Riboflavin-specific deaminase) [Bacillus cereus AH676]
          Length = 379

 Score =  108 bits (270), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 35/158 (22%), Positives = 62/158 (39%), Gaps = 24/158 (15%)

Query: 3   KGNVFMSCALEEAQ-NAALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
               +M  AL+ A+  +   +  P VGAV V +  I+    +     +    HAE+ A++
Sbjct: 11  TDQEYMRIALQLAEGTSGQTSPNPMVGAVVVKDGNIVGMGAHLRAGEE----HAEVHALQ 66

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           M  +        +  +YVTLEPC        C   +    ++R+     +       NG 
Sbjct: 67  MAGQ-----NAKDATVYVTLEPCSHFGKTPPCCELLIEKGVKRVVIATLDCNPLVSGNGK 121

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF---KERR 149
           +    A      E+  G+ E  +  + + FF   K +R
Sbjct: 122 RTLEEA----RIEVTTGVLEAEAVLLNRYFFHYMKTKR 155


>gi|238783633|ref|ZP_04627654.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Yersinia
           bercovieri ATCC 43970]
 gi|238715511|gb|EEQ07502.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Yersinia
           bercovieri ATCC 43970]
          Length = 369

 Score =  108 bits (270), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 36/159 (22%), Positives = 54/159 (33%), Gaps = 25/159 (15%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP----VGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56
           M+    +M+ A E A+        P    VG V V + +I+    +          HAE+
Sbjct: 1   MQPDEFYMARAFELARMGRFT--TPPNPNVGCVLVRDGEIVGEGYHLRAGE----PHAEV 54

Query: 57  LAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGI 110
            A+RM               YVTLEPC        CA A+  A + R+     +P     
Sbjct: 55  HALRMAGEKA-----RGATAYVTLEPCSHHGRTPPCADALVAAGVIRVVAAMQDPNPQVA 109

Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             G      A       +  G+    +  +   F K  R
Sbjct: 110 GRGLYKLKQAG----IAVDHGLMLAEAEAVNLGFLKRMR 144


>gi|295093779|emb|CBK82870.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase
           /5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Coprococcus sp. ART55/1]
          Length = 382

 Score =  108 bits (270), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 41/152 (26%), Positives = 57/152 (37%), Gaps = 21/152 (13%)

Query: 4   GNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
              +M  A+E A+      N  P VGAV V + +II    +          HAE    R 
Sbjct: 11  DPSYMRRAIELARRGTGAVNPNPLVGAVIVKDGRIIGEGYHVRYGEL----HAE----RA 62

Query: 62  G-CRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
               +  Q       +YVTLEPC        C  AI   +IR++Y G+ +P       G 
Sbjct: 63  AFASLKDQADAEGAVMYVTLEPCCHFGKQPPCVDAIIEHKIRKVYCGSDDPNAMVAGKGF 122

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
           +    A      E+Y    +     I   FFK
Sbjct: 123 KRLRDAG----IEVYTHCLKAECDAINGIFFK 150


>gi|126663421|ref|ZP_01734418.1| riboflavin biosynthesis protein RibD [Flavobacteria bacterium
           BAL38]
 gi|126624369|gb|EAZ95060.1| riboflavin biosynthesis protein RibD [Flavobacteria bacterium
           BAL38]
          Length = 346

 Score =  108 bits (270), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 37/154 (24%), Positives = 61/154 (39%), Gaps = 21/154 (13%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57
           M     ++   +E A+N       P   VG+V V  NKII    ++         HAE+ 
Sbjct: 1   MTTHEFYIKRCIELAKNGLGTT-YPNPLVGSVIVYENKIIGEGWHKKAGE----PHAEVN 55

Query: 58  AIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIE 111
           A+     +  + +L E  +YV+LEPC        C   I +  I  +  G  +P      
Sbjct: 56  AVNS---VKDKSLLKEATIYVSLEPCSHFGKTPPCCDLIIVNEIPNVVVGTVDPFAKVAG 112

Query: 112 NGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
           NG +    +      ++  GI E    ++ + FF
Sbjct: 113 NGIKKLVESG----KKVTVGILEDECNELNKRFF 142


>gi|302869363|ref|YP_003838000.1| CMP/dCMP deaminase [Micromonospora aurantiaca ATCC 27029]
 gi|302572222|gb|ADL48424.1| CMP/dCMP deaminase zinc-binding [Micromonospora aurantiaca ATCC
           27029]
          Length = 141

 Score =  108 bits (270), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 29/106 (27%), Positives = 47/106 (44%), Gaps = 1/106 (0%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRM 61
               F+  A+E A  A    E P  ++ V  +  ++    N     KDVTAH E+   R 
Sbjct: 4   DDEAFLRRAVELADRAGASGERPFASLLVGADGTVLIEDHNTVVSDKDVTAHPELKLARW 63

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKG 107
             R L+ E      ++ + +PC MC  AI+ + + R+ Y  S  + 
Sbjct: 64  AARQLAPEAAVATTMFTSCQPCPMCTVAINASGLGRVVYALSTEQF 109


>gi|229192323|ref|ZP_04319287.1| RibD (Riboflavin-specific deaminase) [Bacillus cereus ATCC 10876]
 gi|228591103|gb|EEK48958.1| RibD (Riboflavin-specific deaminase) [Bacillus cereus ATCC 10876]
          Length = 379

 Score =  108 bits (270), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 35/158 (22%), Positives = 62/158 (39%), Gaps = 24/158 (15%)

Query: 3   KGNVFMSCALEEAQ-NAALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
               +M  AL+ A+  +   +  P VGAV V +  I+    +     +    HAE+ A++
Sbjct: 11  TDQEYMRIALQLAEGTSGQTSPNPMVGAVVVKDGNIVGIGAHLRAGEE----HAEVHALQ 66

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           M  +        +  +YVTLEPC        C   +    ++R+     +       NG 
Sbjct: 67  MAGQ-----NAKDATVYVTLEPCSHFGKTPPCCELLIERGVKRVVIATLDCNPLVSGNGK 121

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF---KERR 149
           +    A      E+  G+ E  +  + + FF   K +R
Sbjct: 122 RRLEEA----RIEVTTGVLEAEAVLLNRYFFHYMKTKR 155


>gi|218899272|ref|YP_002447683.1| riboflavin biosynthesis protein RibD [Bacillus cereus G9842]
 gi|218541932|gb|ACK94326.1| riboflavin biosynthesis protein RibD [Bacillus cereus G9842]
          Length = 370

 Score =  108 bits (270), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 35/158 (22%), Positives = 62/158 (39%), Gaps = 24/158 (15%)

Query: 3   KGNVFMSCALEEAQ-NAALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
               +M  AL+ A+  +   +  P VGAV V +  I+    +     +    HAE+ A++
Sbjct: 2   TDQEYMRIALQLAEGTSGQTSPNPMVGAVVVKDGNIVGMGAHLRAGEE----HAEVHALQ 57

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           M  +        +  +YVTLEPC        C   +    ++R+     +       NG 
Sbjct: 58  MASQ-----NAKDATVYVTLEPCSHFGKTPPCCELLIEKGVKRVVIATLDCNPLVSGNGK 112

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF---KERR 149
           +    A      E+  G+ E  +  + + FF   K +R
Sbjct: 113 RRLEEA----RIEVTTGVLEAEAVLLNRYFFHYMKTKR 146


>gi|57640359|ref|YP_182837.1| riboflavin biosynthesis protein RibD [Thermococcus kodakarensis
           KOD1]
 gi|57158683|dbj|BAD84613.1| riboflavin biosynthesis protein RibD [Thermococcus kodakarensis
           KOD1]
          Length = 353

 Score =  108 bits (270), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 37/122 (30%), Positives = 47/122 (38%), Gaps = 14/122 (11%)

Query: 2   KKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
            +   FM  ALE A+      N  P VGAV V + KII    +R    K    HAEI AI
Sbjct: 3   DEDEKFMRLALELAKRGEGWTNPNPMVGAVIVKDGKIIGVGWHRKFGEK----HAEINAI 58

Query: 60  RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113
                      +    +YVTLEPC        CA  I     +R+     +P       G
Sbjct: 59  EDAKAK--GYDVRGATMYVTLEPCSHWGKQPPCADRIIQEGFKRVVVAMEDPNPLVAGQG 116

Query: 114 TQ 115
            +
Sbjct: 117 IE 118


>gi|228902621|ref|ZP_04066772.1| RibD (Riboflavin-specific deaminase) [Bacillus thuringiensis IBL
           4222]
 gi|228967148|ref|ZP_04128184.1| RibD (Riboflavin-specific deaminase) [Bacillus thuringiensis
           serovar sotto str. T04001]
 gi|228792517|gb|EEM40083.1| RibD (Riboflavin-specific deaminase) [Bacillus thuringiensis
           serovar sotto str. T04001]
 gi|228857062|gb|EEN01571.1| RibD (Riboflavin-specific deaminase) [Bacillus thuringiensis IBL
           4222]
          Length = 379

 Score =  108 bits (270), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 35/158 (22%), Positives = 62/158 (39%), Gaps = 24/158 (15%)

Query: 3   KGNVFMSCALEEAQ-NAALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
               +M  AL+ A+  +   +  P VGAV V +  I+    +     +    HAE+ A++
Sbjct: 11  TDQEYMRIALQLAEGTSGQTSPNPMVGAVVVKDGNIVGMGAHLRAGEE----HAEVHALQ 66

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           M  +        +  +YVTLEPC        C   +    ++R+     +       NG 
Sbjct: 67  MASQ-----NAKDATVYVTLEPCSHFGKTPPCCELLIEKGVKRVVIATLDCNPLVSGNGK 121

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF---KERR 149
           +    A      E+  G+ E  +  + + FF   K +R
Sbjct: 122 RRLEEA----RIEVTTGVLEAEAVLLNRYFFHYMKTKR 155


>gi|153947163|ref|YP_001402077.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Yersinia pseudotuberculosis IP 31758]
 gi|152958658|gb|ABS46119.1| riboflavin biosynthesis protein RibD [Yersinia pseudotuberculosis
           IP 31758]
          Length = 369

 Score =  107 bits (269), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 36/157 (22%), Positives = 55/157 (35%), Gaps = 21/157 (13%)

Query: 1   MKKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           M+    +M+ A E A+      +  P VG V V + +I+    +          HAE+ A
Sbjct: 1   MQPDEFYMARAFELARLGRFTTSPNPNVGCVLVRDGEIVGEGYHLRAGE----PHAEVHA 56

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
           +RM               YVTLEPC        CA A+  A + R+     +P       
Sbjct: 57  LRMAGEKA-----RGATAYVTLEPCSHYGRTPPCADALVAAGVIRVVAAMQDPNPEVAGR 111

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
           G      A       +  G+    +  +   F K  R
Sbjct: 112 GLYKLKQAG----IAVDHGLMLAEAEAVNLGFLKRMR 144


>gi|326563101|gb|EGE13374.1| riboflavin biosynthesis protein RibD [Moraxella catarrhalis
           12P80B1]
          Length = 350

 Score =  107 bits (269), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 38/157 (24%), Positives = 63/157 (40%), Gaps = 18/157 (11%)

Query: 1   MKKGNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           +++   +M  A+ EA+      R    VG V V ++ +I +  +     K    HAEI A
Sbjct: 7   IQQDIYYMQLAIAEAKKGIYTTRPNPAVGCVLVKDSLVIGQGYH----PKAGQPHAEIFA 62

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
           +                 YVTLEPC        CA A+  A +RR+   + +P      N
Sbjct: 63  L--ADAKAQGFDTKGATAYVTLEPCSHTGRTPPCADALIAANLRRVVVASLDPNPKVAGN 120

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
           G +       +   E+  G+ +Q++  +   F K  R
Sbjct: 121 GIKKLQ----NAGIEVLVGVCDQQAAALNLGFLKAMR 153


>gi|331018226|gb|EGH98282.1| riboflavin biosynthesis protein RibD [Pseudomonas syringae pv.
           lachrymans str. M302278PT]
          Length = 378

 Score =  107 bits (269), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 35/152 (23%), Positives = 56/152 (36%), Gaps = 21/152 (13%)

Query: 4   GNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
              +M+ ALE A+           VG V V + +I+ +  +          HAE+ A+R 
Sbjct: 9   DVHYMAHALELARKGLYSTHPNPRVGCVIVRDGQIVGQGWHARAGE----PHAEVHALRE 64

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
              +           YVTLEPC        CA A+  A + R+     +P      +G  
Sbjct: 65  AGELA-----RGATAYVTLEPCSHQGRTPPCADALISAGLARVVAAMQDPNPQVAGSGLL 119

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
               A       +  G+ E  +R + + F K 
Sbjct: 120 RLMTAG----ISVQCGVLEGEARALNKGFIKR 147


>gi|28867918|ref|NP_790537.1| riboflavin biosynthesis protein RibD [Pseudomonas syringae pv.
           tomato str. DC3000]
 gi|28851154|gb|AAO54232.1| riboflavin biosynthesis protein RibD [Pseudomonas syringae pv.
           tomato str. DC3000]
          Length = 381

 Score =  107 bits (269), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 35/152 (23%), Positives = 56/152 (36%), Gaps = 21/152 (13%)

Query: 4   GNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
              +M+ ALE A+           VG V V + +I+ +  +          HAE+ A+R 
Sbjct: 12  DVHYMAHALELARKGLYSTHPNPRVGCVIVRDGQIVGQGWHARAGE----PHAEVHALRE 67

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
              +           YVTLEPC        CA A+  A + R+     +P      +G  
Sbjct: 68  AGELA-----RGATAYVTLEPCSHQGRTPPCADALISAGLARVVAAMQDPNPQVAGSGLL 122

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
               A       +  G+ E  +R + + F K 
Sbjct: 123 RLMTAG----ISVQCGVLEGEARALNKGFIKR 150


>gi|291084824|ref|ZP_06542690.2| tRNA-specific adenosine deaminase [Salmonella enterica subsp.
          enterica serovar Typhi str. AG3]
          Length = 76

 Score =  107 bits (269), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 28/69 (40%), Positives = 37/69 (53%)

Query: 3  KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
              +M  AL  A+ A    E+PVGAV V N+++I    NR     D TAHAEI+A+R G
Sbjct: 7  DHEYWMRHALTLAKRAWDEREVPVGAVLVHNHRVIGEGWNRPIGRHDPTAHAEIMALRQG 66

Query: 63 CRILSQEIL 71
            +L    L
Sbjct: 67 GLVLQNYRL 75


>gi|317122797|ref|YP_004102800.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase;
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Thermaerobacter marianensis DSM 12885]
 gi|315592777|gb|ADU52073.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase;
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Thermaerobacter marianensis DSM 12885]
          Length = 427

 Score =  107 bits (269), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 44/156 (28%), Positives = 61/156 (39%), Gaps = 23/156 (14%)

Query: 3   KGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
               FM  AL  A  A  R   P   VGAV V + +++    +R         HAEI A+
Sbjct: 34  TDRAFMRRALRLASRARGRT-HPNPMVGAVIVRDGEVVGEGFHRRAGE----PHAEIEAL 88

Query: 60  RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113
           RM       E      LYVTLEPC        C  AI  A +RR+     +P        
Sbjct: 89  RMAG-----ERARGATLYVTLEPCCHYGRTPPCTGAIISAGLRRVVVAMVDPDP----RV 139

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
                 A      E+  G+ E+ +R++ + +   RR
Sbjct: 140 AGRGIAALAAAGIEVAVGLEEEAARRLNEAYIVHRR 175


>gi|57234067|ref|YP_181903.1| riboflavin biosynthesis protein RibD [Dehalococcoides ethenogenes
           195]
 gi|57224515|gb|AAW39572.1| riboflavin biosynthesis protein RibD [Dehalococcoides ethenogenes
           195]
          Length = 365

 Score =  107 bits (269), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 40/151 (26%), Positives = 66/151 (43%), Gaps = 25/151 (16%)

Query: 6   VFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
            +MS AL  A+ A    ++   P VGAV V N +++ +   +     D   HAEI+A++ 
Sbjct: 2   KYMSQALSLAKLA--IGQVSPNPAVGAVIVKNGEVVGQGFTQP-PGGD---HAEIVALKQ 55

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
                         LYVTLEPC        C  AI  + I+ +Y    +        G +
Sbjct: 56  AAEKA-----KGAALYVTLEPCCHQGRTPPCTVAIIESGIKEVYIATLDDNPLVSGKGKK 110

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
               A      +++ G+ E+ +RQ+ + +FK
Sbjct: 111 ELEDAG----IKVHLGMMEREARQMNEAYFK 137


>gi|294141969|ref|YP_003557947.1| riboflavin biosynthesis protein RibD [Shewanella violacea DSS12]
 gi|293328438|dbj|BAJ03169.1| riboflavin biosynthesis protein RibD [Shewanella violacea DSS12]
          Length = 379

 Score =  107 bits (269), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 39/153 (25%), Positives = 59/153 (38%), Gaps = 16/153 (10%)

Query: 3   KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +   FMS A++ A+         P VG V  L+++I+    +   +      HAE+ A+ 
Sbjct: 5   EDTEFMSRAIKLARRGLYTTRPNPCVGCVITLDDQILGEGFH--IQAGGP--HAEVHALA 60

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           M  +  SQ  L     YVTLEPC        CA A+    I R+     +P       G 
Sbjct: 61  MATKRASQAALKGATAYVTLEPCSHYGRTPPCAEALIKHGISRVVVAVEDPNPQVSGRGI 120

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
           +    A      E+  G+    +  I   F K 
Sbjct: 121 KMLRDAG----IEVDVGLLSDEAAGINPGFMKR 149


>gi|290474698|ref|YP_003467578.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino) uracil
           reductase [Xenorhabdus bovienii SS-2004]
 gi|289174011|emb|CBJ80798.1| bifunctional: diaminohydroxyphosphoribosylaminopyrimidine deaminase
           (N-terminal); 5-amino-6-(5-phosphoribosylamino) uracil
           reductase [Xenorhabdus bovienii SS-2004]
          Length = 369

 Score =  107 bits (269), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 39/157 (24%), Positives = 54/157 (34%), Gaps = 21/157 (13%)

Query: 1   MKKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           M     +MS ALE A       +  P VG V V  + I+    +          HAE+ A
Sbjct: 1   MTLDEKYMSRALELANQGRFTTSPNPNVGCVIVQGDHIVGEGFHVCAGE----PHAEVHA 56

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
           +RM               YVTLEPC        CA A+  A I R+     +P       
Sbjct: 57  LRMAGGKA-----KGATAYVTLEPCSHHGKTPPCADALIAAGISRVVAAMQDPNPQVAGR 111

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
           G      A       +  G+    +  + + F K  R
Sbjct: 112 GLYKLQQAG----IAVEHGVLMAEAEALNKGFLKRMR 144


>gi|300715569|ref|YP_003740372.1| riboflavin biosynthesis protein RibD [Erwinia billingiae Eb661]
 gi|299061405|emb|CAX58515.1| Riboflavin biosynthesis protein RibD [Erwinia billingiae Eb661]
          Length = 368

 Score =  107 bits (269), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 36/155 (23%), Positives = 55/155 (35%), Gaps = 21/155 (13%)

Query: 3   KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
              ++M+ ALE A+         P VG V V +  ++    +          HAE+ A+R
Sbjct: 2   SDEIWMARALELARRGRFTTTPNPNVGCVIVRDGVMVGEGYHFRAGE----PHAEVHALR 57

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           M               YVTLEPC        C  A+  A + R+     +P       G 
Sbjct: 58  MAGDKAQ-----GATAYVTLEPCSHHGRTPPCCDALIAAGVSRVIAAMQDPNPEVAGRGL 112

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
                A      E+  G+  Q +  + + F K  R
Sbjct: 113 YRLQQAG----IEVSHGLMMQEAEALNRGFLKRMR 143


>gi|228986473|ref|ZP_04146609.1| Riboflavin biosynthesis protein [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
 gi|228773294|gb|EEM21724.1| Riboflavin biosynthesis protein [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
          Length = 358

 Score =  107 bits (269), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 44/146 (30%), Positives = 62/146 (42%), Gaps = 23/146 (15%)

Query: 8   MSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           M  ALE A  A      P   VG+V V +N+I+    +          HAEI AIRM   
Sbjct: 1   MKLALENA-KAMKGQTTPNPLVGSVIVNDNRIVGIGAHMKAGE----PHAEIHAIRMAG- 54

Query: 65  ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
               E      +YVTLEPC+       CA AI  A I+R+     +P       G Q   
Sbjct: 55  ----EQARGGTIYVTLEPCSHHGRTGPCAEAIVQAGIKRVVVATLDPNPLVSGRGIQILQ 110

Query: 119 LATCHHSPEIYPGISEQRSRQIIQDF 144
            A      ++  G+ E+ S+++ + F
Sbjct: 111 DAG----IDVLVGVCEEESKKMNEVF 132


>gi|118591858|ref|ZP_01549253.1| putative deaminase [Stappia aggregata IAM 12614]
 gi|118435501|gb|EAV42147.1| putative deaminase [Stappia aggregata IAM 12614]
          Length = 155

 Score =  107 bits (269), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 37/127 (29%), Positives = 51/127 (40%), Gaps = 6/127 (4%)

Query: 8   MSCALEEAQNAALRNEIPVGA-VAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  A+  + +      IP  A V   N +I+ R  NR RE  D TAHAE+ AIR  CR  
Sbjct: 1   MEEAVSFSVDHVRDGGIPFTAFVVDRNGEILGRGVNRVREYHDPTAHAEVEAIRDACRTH 60

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQ-----FYTLAT 121
               L    L  + EPC MC  +   A + R+ + A   +        +     F     
Sbjct: 61  GTVHLHGATLLASGEPCAMCYMSALDAGVSRILFAADRDEATAYGFDYRGSYRLFSDDPQ 120

Query: 122 CHHSPEI 128
              SP +
Sbjct: 121 SWRSPVV 127


>gi|317968925|ref|ZP_07970315.1| putative cytosine deaminase [Synechococcus sp. CB0205]
          Length = 144

 Score =  107 bits (269), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 32/102 (31%), Positives = 43/102 (42%), Gaps = 4/102 (3%)

Query: 9   SCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
             A  EA+       IP+GAV    +  I++R  N+  +  D T+H E   IR   R   
Sbjct: 6   DAARAEAERGWSEGGIPIGAVLAQEDGTIVARGHNQRVQNGDPTSHGETQCIRNPGR--- 62

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109
           +    E+ L  TL PC MCA    L   RR+  G      G 
Sbjct: 63  RRDWRELTLVTTLSPCPMCAGTAVLLGFRRVVIGERKTFQGA 104


>gi|148654182|ref|YP_001281275.1| riboflavin biosynthesis protein RibD [Psychrobacter sp. PRwf-1]
 gi|148573266|gb|ABQ95325.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Psychrobacter sp. PRwf-1]
          Length = 368

 Score =  107 bits (269), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 41/156 (26%), Positives = 63/156 (40%), Gaps = 21/156 (13%)

Query: 2   KKGNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
           K+   +M+ A+EEA+      R    VG V V NN I+    +   +      HAE+ A+
Sbjct: 28  KQDIYYMNLAIEEAKKGLFTTRPNPAVGCVIVNNNLIVGTGYH--PQAGQP--HAEVFAL 83

Query: 60  RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113
           R       ++       YVTLEPC        CA A+  + + R+     +P       G
Sbjct: 84  REA-----KDNAKGATAYVTLEPCSHTGRTPPCAQALINSGVSRVVVAGLDPNPKVAGRG 138

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
                 A      E+  G+S Q++ Q+   F K  R
Sbjct: 139 IAMLKAAG----IEVTVGVSTQQAEQLNLGFLKAMR 170


>gi|218230924|ref|YP_002368914.1| riboflavin biosynthesis protein RibD [Bacillus cereus B4264]
 gi|218158881|gb|ACK58873.1| riboflavin biosynthesis protein RibD [Bacillus cereus B4264]
          Length = 370

 Score =  107 bits (269), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 34/158 (21%), Positives = 61/158 (38%), Gaps = 24/158 (15%)

Query: 3   KGNVFMSCALEEAQ-NAALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
               +M  AL+ A+  +   +  P VGAV V +  I+    +     +    HAE+ A++
Sbjct: 2   TDQEYMRIALQLAEGTSGQTSPNPMVGAVVVKDGNIVGMGAHLRAGEE----HAEVHALQ 57

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           M  +        +  +YVTLEPC        C   +    ++R+     +       NG 
Sbjct: 58  MAGQ-----NAKDATVYVTLEPCSHFGKTPPCCELLIEKGVKRVVIATLDCNPLVSGNGK 112

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF---KERR 149
           +           E+  G+ E  +  + + FF   K +R
Sbjct: 113 RRLEET----RIEVTTGVLEAEAVLLNRYFFHYMKTKR 146


>gi|22124907|ref|NP_668330.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Yersinia pestis KIM 10]
 gi|45440597|ref|NP_992136.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Yersinia pestis biovar Microtus str. 91001]
 gi|51595284|ref|YP_069475.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Yersinia pseudotuberculosis IP 32953]
 gi|108808668|ref|YP_652584.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Yersinia pestis Antiqua]
 gi|108811070|ref|YP_646837.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Yersinia pestis Nepal516]
 gi|145600077|ref|YP_001164153.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Yersinia pestis Pestoides F]
 gi|149364971|ref|ZP_01887006.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Yersinia pestis CA88-4125]
 gi|162418167|ref|YP_001607523.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Yersinia pestis Angola]
 gi|165926574|ref|ZP_02222406.1| riboflavin biosynthesis protein RibD [Yersinia pestis biovar
           Orientalis str. F1991016]
 gi|165935961|ref|ZP_02224531.1| riboflavin biosynthesis protein RibD [Yersinia pestis biovar
           Orientalis str. IP275]
 gi|166011096|ref|ZP_02231994.1| riboflavin biosynthesis protein RibD [Yersinia pestis biovar
           Antiqua str. E1979001]
 gi|166213091|ref|ZP_02239126.1| riboflavin biosynthesis protein RibD [Yersinia pestis biovar
           Antiqua str. B42003004]
 gi|167398606|ref|ZP_02304130.1| riboflavin biosynthesis protein RibD [Yersinia pestis biovar
           Antiqua str. UG05-0454]
 gi|167421644|ref|ZP_02313397.1| riboflavin biosynthesis protein RibD [Yersinia pestis biovar
           Orientalis str. MG05-1020]
 gi|167423702|ref|ZP_02315455.1| riboflavin biosynthesis protein RibD [Yersinia pestis biovar
           Mediaevalis str. K1973002]
 gi|167470057|ref|ZP_02334761.1| riboflavin biosynthesis protein RibD [Yersinia pestis FV-1]
 gi|170025475|ref|YP_001721980.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Yersinia pseudotuberculosis YPIII]
 gi|186894301|ref|YP_001871413.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Yersinia pseudotuberculosis PB1/+]
 gi|218930213|ref|YP_002348088.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Yersinia pestis CO92]
 gi|229838788|ref|ZP_04458947.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino) uracil
           reductase [Yersinia pestis biovar Orientalis str. PEXU2]
 gi|229896058|ref|ZP_04511228.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino) uracil
           reductase [Yersinia pestis Pestoides A]
 gi|229899356|ref|ZP_04514499.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino) uracil
           reductase [Yersinia pestis biovar Orientalis str. India
           195]
 gi|229901297|ref|ZP_04516419.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino) uracil
           reductase [Yersinia pestis Nepal516]
 gi|270489486|ref|ZP_06206560.1| riboflavin biosynthesis protein RibD [Yersinia pestis KIM D27]
 gi|294504911|ref|YP_003568973.1| riboflavin biosynthesis protein RibD (includes:
           diaminohydroxyphosphoribosylaminopyrimidine deaminase;
           5-amino-6-(5-phosphoribosylamino)uracil reductase)
           [Yersinia pestis Z176003]
 gi|21957743|gb|AAM84581.1|AE013703_11 bifunctional pyrimidine deaminase/reductase [Yersinia pestis KIM
           10]
 gi|45435454|gb|AAS61013.1| riboflavin biosynthesis protein RibD [includes:
           diaminohydroxyphosphoribosylaminopyrimidine deaminase;
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Yersinia pestis biovar Microtus str. 91001]
 gi|51588566|emb|CAH20174.1| bifunctional pyrimidine deaminase/reductase in pathway of
           riboflavin synthesis [Yersinia pseudotuberculosis IP
           32953]
 gi|108774718|gb|ABG17237.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase /
           diaminohydroxyphosphoribosylaminopyrimidine deaminase
           [Yersinia pestis Nepal516]
 gi|108780581|gb|ABG14639.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Yersinia pestis Antiqua]
 gi|115348824|emb|CAL21778.1| riboflavin biosynthesis protein RibD [includes:
           diaminohydroxyphosphoribosylaminopyrimidine deaminase;
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Yersinia pestis CO92]
 gi|145211773|gb|ABP41180.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Yersinia pestis Pestoides F]
 gi|149291384|gb|EDM41458.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Yersinia pestis CA88-4125]
 gi|162350982|gb|ABX84930.1| riboflavin biosynthesis protein RibD [Yersinia pestis Angola]
 gi|165916106|gb|EDR34713.1| riboflavin biosynthesis protein RibD [Yersinia pestis biovar
           Orientalis str. IP275]
 gi|165921502|gb|EDR38699.1| riboflavin biosynthesis protein RibD [Yersinia pestis biovar
           Orientalis str. F1991016]
 gi|165990096|gb|EDR42397.1| riboflavin biosynthesis protein RibD [Yersinia pestis biovar
           Antiqua str. E1979001]
 gi|166205878|gb|EDR50358.1| riboflavin biosynthesis protein RibD [Yersinia pestis biovar
           Antiqua str. B42003004]
 gi|166960563|gb|EDR56584.1| riboflavin biosynthesis protein RibD [Yersinia pestis biovar
           Orientalis str. MG05-1020]
 gi|167051110|gb|EDR62518.1| riboflavin biosynthesis protein RibD [Yersinia pestis biovar
           Antiqua str. UG05-0454]
 gi|167057872|gb|EDR67618.1| riboflavin biosynthesis protein RibD [Yersinia pestis biovar
           Mediaevalis str. K1973002]
 gi|169752009|gb|ACA69527.1| riboflavin biosynthesis protein RibD [Yersinia pseudotuberculosis
           YPIII]
 gi|186697327|gb|ACC87956.1| riboflavin biosynthesis protein RibD [Yersinia pseudotuberculosis
           PB1/+]
 gi|229681226|gb|EEO77320.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino) uracil
           reductase [Yersinia pestis Nepal516]
 gi|229687758|gb|EEO79831.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino) uracil
           reductase [Yersinia pestis biovar Orientalis str. India
           195]
 gi|229695154|gb|EEO85201.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino) uracil
           reductase [Yersinia pestis biovar Orientalis str. PEXU2]
 gi|229700981|gb|EEO89010.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino) uracil
           reductase [Yersinia pestis Pestoides A]
 gi|262362977|gb|ACY59698.1| riboflavin biosynthesis protein RibD (includes:
           diaminohydroxyphosphoribosylaminopyrimidine deaminase;
           5-amino-6-(5-phosphoribosylamino)uracil reductase)
           [Yersinia pestis D106004]
 gi|262366897|gb|ACY63454.1| riboflavin biosynthesis protein RibD (includes:
           diaminohydroxyphosphoribosylaminopyrimidine deaminase;
           5-amino-6-(5-phosphoribosylamino)uracil reductase)
           [Yersinia pestis D182038]
 gi|270337990|gb|EFA48767.1| riboflavin biosynthesis protein RibD [Yersinia pestis KIM D27]
 gi|294355370|gb|ADE65711.1| riboflavin biosynthesis protein RibD (includes:
           diaminohydroxyphosphoribosylaminopyrimidine deaminase;
           5-amino-6-(5-phosphoribosylamino)uracil reductase)
           [Yersinia pestis Z176003]
          Length = 369

 Score =  107 bits (269), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 36/157 (22%), Positives = 55/157 (35%), Gaps = 21/157 (13%)

Query: 1   MKKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           M+    +M+ A E A+      +  P VG V V + +I+    +          HAE+ A
Sbjct: 1   MQPDEFYMARAFELARLGRFTTSPNPNVGCVLVRDGEIVGEGYHLRAGE----PHAEVHA 56

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
           +RM               YVTLEPC        CA A+  A + R+     +P       
Sbjct: 57  LRMAGEKA-----RGATAYVTLEPCSHYGRTPPCADALVAAGVIRVVAAMQDPNPEVAGR 111

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
           G      A       +  G+    +  +   F K  R
Sbjct: 112 GLYKLKQAG----IAVDHGLMLAEAEAVNLGFLKRMR 144


>gi|228922861|ref|ZP_04086159.1| RibD (Riboflavin-specific deaminase) [Bacillus thuringiensis
           serovar huazhongensis BGSC 4BD1]
 gi|228836916|gb|EEM82259.1| RibD (Riboflavin-specific deaminase) [Bacillus thuringiensis
           serovar huazhongensis BGSC 4BD1]
          Length = 379

 Score =  107 bits (269), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 36/158 (22%), Positives = 62/158 (39%), Gaps = 24/158 (15%)

Query: 3   KGNVFMSCALEEAQ-NAALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
               +M  AL+ A+  +   +  P VGAV V +  I+    +     +    HAE+ A++
Sbjct: 11  TDQEYMRIALQLAEGTSGQTSPNPMVGAVVVKDGNIVGMGAHLRAGEE----HAEVHALQ 66

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           M  +        +  +YVTLEPC        C   +    ++R+     +       NG 
Sbjct: 67  MAGQ-----NAKDATVYVTLEPCSHFGKTPPCCELLIEKGVKRVVIATLDCNPLVSGNGK 121

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF---KERR 149
           +    A      E+  GI E  +  + + FF   K +R
Sbjct: 122 RRLEEA----RIEVTTGILEAEALLLNRYFFHYMKTKR 155


>gi|270308361|ref|YP_003330419.1| riboflavin biosynthesis protein,
           5-amino-6-(5-phosphoribosylamino)uracil reductase,
           diaminohydroxyphosphoribosylaminopyrimidine deaminase
           [Dehalococcoides sp. VS]
 gi|270154253|gb|ACZ62091.1| riboflavin biosynthesis protein,
           5-amino-6-(5-phosphoribosylamino)uracil reductase,
           diaminohydroxyphosphoribosylaminopyrimidine deaminase
           [Dehalococcoides sp. VS]
          Length = 365

 Score =  107 bits (269), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 38/151 (25%), Positives = 66/151 (43%), Gaps = 25/151 (16%)

Query: 6   VFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
            +MS AL  A+ A    ++   P VGAV V N +++ +   +     D   HAEI+A++ 
Sbjct: 2   KYMSQALSLAKLA--IGQVSPNPSVGAVIVKNGEVVGQGFTQP-PGGD---HAEIVALKQ 55

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
                         LYVTLEPC        C  +I  + I+ +Y    +        G +
Sbjct: 56  AAEKA-----KGAALYVTLEPCCHQGRTPPCTGSIIESGIKEVYIATLDDNPLVSGKGKK 110

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
                  +   +++ G+ E+ +RQ+ + +FK
Sbjct: 111 ELE----NAGIKVHLGMMEREARQMNEAYFK 137


>gi|148264237|ref|YP_001230943.1| riboflavin biosynthesis protein RibD [Geobacter uraniireducens Rf4]
 gi|146397737|gb|ABQ26370.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase /
           diaminohydroxyphosphoribosylaminopyrimidine deaminase
           [Geobacter uraniireducens Rf4]
          Length = 368

 Score =  107 bits (269), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 38/152 (25%), Positives = 58/152 (38%), Gaps = 23/152 (15%)

Query: 4   GNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
               M  A+  A+    R   P   VG V V +  ++    +     K  T HAE+ A+R
Sbjct: 5   HEKMMKRAIVLAKRGIGRT-APNPTVGCVIVKDGAVVGEGWH----KKAGTPHAEVHALR 59

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
               +         D+YVTLEPC        CA A+  A++ R++ G  +P       G 
Sbjct: 60  QAGEMA-----RGADVYVTLEPCAHFGKTPPCADALIAAKVCRVHIGMVDPNPRVCGEGI 114

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
                A      E+   + E   R + + F K
Sbjct: 115 SMLRSAG----IEVVVSVLEDNCRSLNEPFIK 142


>gi|319790138|ref|YP_004151771.1| riboflavin biosynthesis protein RibD [Thermovibrio ammonificans
           HB-1]
 gi|317114640|gb|ADU97130.1| riboflavin biosynthesis protein RibD [Thermovibrio ammonificans
           HB-1]
          Length = 371

 Score =  107 bits (269), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 33/150 (22%), Positives = 55/150 (36%), Gaps = 22/150 (14%)

Query: 3   KGNVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
               FM  AL EA     +      VGAV V   ++++   +          HAE +A+ 
Sbjct: 2   NDCYFMELALAEAYKGKGKTLPNPAVGAVVVREGRVVATGYH--EAPGRP--HAEAVALE 57

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
                          LYVTLEPC        C   I  + ++R+  G  +P         
Sbjct: 58  RAGDKA-----KGATLYVTLEPCNHYGRTPPCTEKIIASGVKRVVVGLRDPNPVASGGIE 112

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
           +           E+  G+ ++R  ++++DF
Sbjct: 113 RLRGA-----GIEVTVGVLKERCFELVEDF 137


>gi|312830146|emb|CBX34988.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp.
           aureus ECT-R 2]
          Length = 347

 Score =  107 bits (269), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 39/153 (25%), Positives = 65/153 (42%), Gaps = 26/153 (16%)

Query: 5   NVFMSCALEEAQNAALRNEI--PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
           + FM  A++ A     +  +  PVGAV V   +I+    +  +  K    HAE+ A+ M 
Sbjct: 2   SQFMDYAIQLANMVQGQTGVNPPVGAVVVNEGRIVGIGAHLRKGDK----HAEVQALDMV 57

Query: 63  CRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116
                Q+      +Y+TLEPC        C   I   +I ++ Y   +       N    
Sbjct: 58  -----QQNAEGATIYITLEPCSHFGSTPPCVNKIIDCKIAKVVYATKD-------NSLDT 105

Query: 117 YTLATCH-HSPEIYPGISEQRSRQIIQDFFKER 148
           +   T   H  E+   + ++R+ Q+ QDFFK +
Sbjct: 106 HGDETLRAHGIEVEC-VDDERASQLYQDFFKAK 137


>gi|312143490|ref|YP_003994936.1| riboflavin biosynthesis protein RibD [Halanaerobium sp.
           'sapolanicus']
 gi|311904141|gb|ADQ14582.1| riboflavin biosynthesis protein RibD [Halanaerobium sp.
           'sapolanicus']
          Length = 381

 Score =  107 bits (269), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 35/152 (23%), Positives = 61/152 (40%), Gaps = 21/152 (13%)

Query: 3   KGNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
               +M+ ALE A+           VGAV V N +II    ++         HAE+ A++
Sbjct: 8   TDIRYMARALEIAKKGEGSASPNPMVGAVLVKNGEIIGEGYHKFYGG----PHAEVYALK 63

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
              +  +       D+Y+TLEPC        CA  +  + I+R      +P       G 
Sbjct: 64  EAGQNANN-----ADIYLTLEPCSHYGKTPPCADKLIKSGIKRAVIAMVDPNPEVSGRGI 118

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
           +    A      E+  G+  ++++ + + F K
Sbjct: 119 ELLKEAG----IEVELGLMAEKAKDLNEVFLK 146


>gi|315607126|ref|ZP_07882130.1| riboflavin biosynthesis protein RibD [Prevotella buccae ATCC 33574]
 gi|315251180|gb|EFU31165.1| riboflavin biosynthesis protein RibD [Prevotella buccae ATCC 33574]
          Length = 322

 Score =  107 bits (269), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 39/151 (25%), Positives = 56/151 (37%), Gaps = 18/151 (11%)

Query: 3   KGNVFMSCALEEAQNAALRN--EIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAI 59
               FM   L+ A+N          VGAV V  + +II    +          HAE+ A 
Sbjct: 8   TDEKFMRRCLQLARNGRQNAKPNPMVGAVIVSPDGRIIGEGYHVRCGEG----HAEVNAF 63

Query: 60  RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113
              C      +L E  +YV+LEPC        CA  I    +RR+  G  +P       G
Sbjct: 64  ASVCPEDEA-LLHESTIYVSLEPCSHFGKTPPCADLIVRKGVRRVVCGCIDPFAEVSGRG 122

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
            +    A      E+  G+ EQ    + + F
Sbjct: 123 VERIRKAG----IEVTVGVLEQECLTLNRRF 149


>gi|261749554|ref|YP_003257240.1| riboflavin biosynthesis protein RibD [Blattabacterium sp.
           (Periplaneta americana) str. BPLAN]
 gi|261497647|gb|ACX84097.1| riboflavin biosynthesis protein RibD [Blattabacterium sp.
           (Periplaneta americana) str. BPLAN]
          Length = 347

 Score =  107 bits (269), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 40/160 (25%), Positives = 65/160 (40%), Gaps = 22/160 (13%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           M    +FM  A++ A+N        P VG +   N  I+S   +    +     HAE+ A
Sbjct: 1   MNHKKIFMYRAIQLAKNGLGLTSPNPMVGCLIERNGLILSEGWHYKVGMD----HAEVNA 56

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
           I    R+ +  +L +  LYVTLEPC        C   I  ++I R+  G  +P       
Sbjct: 57  IN---RVENTSLLTDSTLYVTLEPCVHFGKTPPCVDLIIKSKIPRVVIGIQDPCHKVNGL 113

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF---KERR 149
           G Q           E+   +   + R + + FF   +++R
Sbjct: 114 GIQKLRENG----IEVIENVLRDQCRILNKRFFTFYEKKR 149


>gi|331012488|gb|EGH92544.1| riboflavin biosynthesis protein RibD [Pseudomonas syringae pv.
           tabaci ATCC 11528]
          Length = 249

 Score =  107 bits (268), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 36/152 (23%), Positives = 56/152 (36%), Gaps = 21/152 (13%)

Query: 4   GNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
              +M+ ALE A+N          VG V V + +I+    +          HAE+ A+R 
Sbjct: 9   DVHYMARALELARNGLYSTHPNPRVGCVIVRDGQIVGEGWHVRAGE----PHAEVHALRQ 64

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
              +           YVTLEPC        CA A+  A + R+     +P       G  
Sbjct: 65  AGELA-----RGATAYVTLEPCSHQGRTPPCADALVNAGLARVVAAMQDPNPEVSGRGL- 118

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
              L   +    +  G+ E  +R + + F K 
Sbjct: 119 ---LRLMNAGIGVQCGVLESEARALNKGFLKR 147


>gi|253735372|ref|ZP_04869537.1| riboflavin specific deaminase [Staphylococcus aureus subsp. aureus
           TCH130]
 gi|269203407|ref|YP_003282676.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp.
           aureus ED98]
 gi|253726661|gb|EES95390.1| riboflavin specific deaminase [Staphylococcus aureus subsp. aureus
           TCH130]
 gi|262075697|gb|ACY11670.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp.
           aureus ED98]
          Length = 343

 Score =  107 bits (268), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 38/150 (25%), Positives = 63/150 (42%), Gaps = 26/150 (17%)

Query: 8   MSCALEEAQNAALRNEI--PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M  A++ A     +  +  PVGAV V   +I+    +  +  K    HAE+ A+ M    
Sbjct: 1   MDYAIQLANMVQGQTGVNPPVGAVVVNEGRIVGIGAHLRKGDK----HAEVQALDMA--- 53

Query: 66  LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
             Q+      +Y+TLEPC        C   I   +I ++ Y   +       N    +  
Sbjct: 54  --QQNAEGATIYITLEPCSHFGSTPPCVNKIIDCKIAKVVYATKD-------NSLDTHGD 104

Query: 120 ATCH-HSPEIYPGISEQRSRQIIQDFFKER 148
            T   H  E+   + ++R+ Q+ QDFFK +
Sbjct: 105 ETLRAHGIEVEC-VDDERASQLYQDFFKAK 133


>gi|118616295|ref|YP_904627.1| hypothetical protein MUL_0449 [Mycobacterium ulcerans Agy99]
 gi|118568405|gb|ABL03156.1| conserved hypothetical protein [Mycobacterium ulcerans Agy99]
          Length = 102

 Score =  107 bits (268), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 30/91 (32%), Positives = 43/91 (47%)

Query: 7  FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
          F   A++ A+        P   V V + ++++ + N+  +  D TAHAEILAIR  C  L
Sbjct: 4  FAQRAIDFARLNVAEGGRPFATVIVKDGQVLAESANKVAQTNDPTAHAEILAIRAACTKL 63

Query: 67 SQEILPEVDLYVTLEPCTMCAAAISLARIRR 97
            E L     YV   PC MC  +  L   +R
Sbjct: 64 GTEQLFGTTFYVLAHPCPMCLGSQELNGGKR 94


>gi|238791408|ref|ZP_04635046.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Yersinia
           intermedia ATCC 29909]
 gi|238729024|gb|EEQ20540.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Yersinia
           intermedia ATCC 29909]
          Length = 369

 Score =  107 bits (268), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 36/159 (22%), Positives = 55/159 (34%), Gaps = 25/159 (15%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP----VGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56
           M+    +M+ A E A+        P    VG V V + +I+    +          HAE+
Sbjct: 1   MQTDEFYMARAFELARLGRFT--TPPNPNVGCVLVRDGEIVGEGYHLRAGE----PHAEV 54

Query: 57  LAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGI 110
            A+RM               YVTLEPC        CA A+  A + R+     +P     
Sbjct: 55  HALRMAGEKA-----RGATAYVTLEPCSHHGCTPPCADALVAAGVIRVVAAMQDPNPQVA 109

Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             G      A       +  G+   ++  +   F K  R
Sbjct: 110 GRGLYKLKQAG----IAVDHGLMLAQAEAVNLGFLKRMR 144


>gi|302525979|ref|ZP_07278321.1| cytidine/deoxycytidine deaminase [Streptomyces sp. AA4]
 gi|302434874|gb|EFL06690.1| cytidine/deoxycytidine deaminase [Streptomyces sp. AA4]
          Length = 147

 Score =  107 bits (268), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 31/142 (21%), Positives = 53/142 (37%), Gaps = 15/142 (10%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           ++ A EEA+       +P+GA     + K++ R  NR  +  D + HAE  A R   R  
Sbjct: 6   LAVAREEAEAGKAEGGVPIGAALFDRDGKLLGRGHNRRVQDGDPSLHAETAAFRAAGR-- 63

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
            +    +  +  TL PC  C+  +    I  +  G S    GG              H  
Sbjct: 64  -RPHYRDTIMVTTLSPCWYCSGLVRQFGIPHVVIGESRTFTGGHGWLAD--------HGV 114

Query: 127 EIYPGISEQ-RSRQIIQDFFKE 147
            I   + +      ++ +F + 
Sbjct: 115 RI--DLLDDPACVALMTEFIER 134


>gi|119962643|ref|YP_947330.1| guanine deaminase [Arthrobacter aurescens TC1]
 gi|119949502|gb|ABM08413.1| guanine deaminase [Arthrobacter aurescens TC1]
          Length = 160

 Score =  107 bits (268), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 34/129 (26%), Positives = 55/129 (42%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           ++ + +++ A++ A +       P GAV V  +  +    NR     D TAHAE++AIR 
Sbjct: 7   QQRDEYLNLAIQLAVHNVSDGGGPFGAVVVTADGTVHEGVNRVTRDHDPTAHAEVVAIRR 66

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
                 +  L    LY + EPC +C +A   ARI  +Y+ A              +    
Sbjct: 67  AAAASKRFDLTGSVLYASCEPCPLCLSATLWARIGHVYFAADRHGAAKAGFDDAVFYEYF 126

Query: 122 CHHSPEIYP 130
               PE+ P
Sbjct: 127 AGTRPELLP 135


>gi|326562323|gb|EGE12649.1| riboflavin biosynthesis protein RibD [Moraxella catarrhalis
           103P14B1]
 gi|326575527|gb|EGE25452.1| riboflavin biosynthesis protein RibD [Moraxella catarrhalis
           101P30B1]
          Length = 350

 Score =  107 bits (268), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 38/157 (24%), Positives = 63/157 (40%), Gaps = 18/157 (11%)

Query: 1   MKKGNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           +++   +M  A+ EA+      R    VG V V ++ +I +  +     K    HAEI A
Sbjct: 7   IQQDIYYMQLAIAEAKKGIYTTRPNPAVGCVLVKDSLVIGQGYH----PKAGQPHAEIFA 62

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
           +                 YVTLEPC        CA A+  A +RR+   + +P      N
Sbjct: 63  L--ADAKARGFDTKGATAYVTLEPCSHTGRTPPCADALIAANLRRVVVASLDPNPKVAGN 120

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
           G +       +   E+  G+ +Q++  +   F K  R
Sbjct: 121 GIKKLQ----NAGIEVLVGVCDQQAAALNLGFLKAMR 153


>gi|184155252|ref|YP_001843592.1| riboflavin biosynthesis protein [Lactobacillus fermentum IFO 3956]
 gi|183226596|dbj|BAG27112.1| riboflavin biosynthesis protein [Lactobacillus fermentum IFO 3956]
          Length = 352

 Score =  107 bits (268), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 38/160 (23%), Positives = 63/160 (39%), Gaps = 23/160 (14%)

Query: 1   MKKGNVFMSCALEEAQNAA-LRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           M     FM  AL EA        + P VGAV V + ++++   +         AHAE  A
Sbjct: 1   MSSDEQFMQLALAEAAKGGSATWKNPQVGAVIVKDGQLLATGYHHQYGQ----AHAERDA 56

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
           I      LS E L    +YVTLEPC        C+  +  +   R+     +P       
Sbjct: 57  I----SKLSNEQLAGATIYVTLEPCFHYGKQPPCSQLLIDSHFARVVVATIDPHQVVGGK 112

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQD---FFKERR 149
           G      A      ++  G+ + ++  + +    F++++R
Sbjct: 113 GIAQLKAAG----IDVEVGLLKDQAEALNRHYFYFYRQQR 148


>gi|301320513|gb|ADK69156.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Mycoplasma mycoides subsp. mycoides SC str. Gladysdale]
          Length = 147

 Score =  107 bits (268), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 44/150 (29%), Positives = 70/150 (46%), Gaps = 4/150 (2%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNK-IISRAGNRNRELKDVTAHAEILAI 59
           M   N  +   + +++ A   N+IPV    + +N  I+S + N   + KD++ HAEI AI
Sbjct: 1   MDDFNNILDLMIYQSKKAIKHNDIPVCCCIIDDNNNILSMSINTRYKNKDISQHAEINAI 60

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
                 L+   L E  L  TLEPC MC +AI   +I  +YY   + K G I+N       
Sbjct: 61  NKLINKLNTFNLSEYKLITTLEPCMMCYSAIKQVKIDTIYYLVDSYKFG-IQNNYSI-ND 118

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
              +   +I     +    +++ DFF  +R
Sbjct: 119 QNLN-LIQIKNHNKQSEYIKLLNDFFINKR 147


>gi|42560609|ref|NP_975060.1| cytosine deaminase [Mycoplasma mycoides subsp. mycoides SC str.
           PG1]
 gi|42492105|emb|CAE76702.1| CYTOSINE DEAMINASE [Mycoplasma mycoides subsp. mycoides SC str.
           PG1]
          Length = 155

 Score =  107 bits (268), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 44/150 (29%), Positives = 70/150 (46%), Gaps = 4/150 (2%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNK-IISRAGNRNRELKDVTAHAEILAI 59
           M   N  +   + +++ A   N+IPV    + +N  I+S + N   + KD++ HAEI AI
Sbjct: 9   MDDFNNILDLMIYQSKKAIKHNDIPVCCCIIDDNNNILSMSINTRYKNKDISQHAEINAI 68

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
                 L+   L E  L  TLEPC MC +AI   +I  +YY   + K G I+N       
Sbjct: 69  NKLINKLNTFNLSEYKLITTLEPCMMCYSAIKQVKIDTIYYLVDSYKFG-IQNNYSI-ND 126

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
              +   +I     +    +++ DFF  +R
Sbjct: 127 QNLN-LIQIKNHNKQSEYIKLLNDFFINKR 155


>gi|117919545|ref|YP_868737.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase /
           diaminohydroxyphosphoribosylaminopyrimidine deaminase
           [Shewanella sp. ANA-3]
 gi|117611877|gb|ABK47331.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase /
           diaminohydroxyphosphoribosylaminopyrimidine deaminase
           [Shewanella sp. ANA-3]
          Length = 381

 Score =  107 bits (268), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 37/152 (24%), Positives = 57/152 (37%), Gaps = 21/152 (13%)

Query: 4   GNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
            N  MS A++ A+      R    VG V V +N+I+    ++         HAE+ A+RM
Sbjct: 7   DNQMMSRAIQLARKGFYTTRPNPSVGCVIVKDNQIVGEGYHQKAGE----PHAEVHALRM 62

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
              +           YVTLEPC        CA A+    ++R+     +P       G Q
Sbjct: 63  AGELA-----RGATAYVTLEPCSHYGRTPPCALALINIGVKRVVVAVEDPNPQVGGRGIQ 117

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
               A      E+  G+    +  +   F K 
Sbjct: 118 MLRDAG----IEVDVGLHRDEAYALNLGFMKR 145


>gi|118468256|ref|YP_888948.1| cytosine deaminase [Mycobacterium smegmatis str. MC2 155]
 gi|118169543|gb|ABK70439.1| cytosine deaminase [Mycobacterium smegmatis str. MC2 155]
          Length = 146

 Score =  107 bits (268), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 33/141 (23%), Positives = 53/141 (37%), Gaps = 13/141 (9%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
              +  A+EEA+       IP+GA     + +++    NR  +  D + HAE  A R   
Sbjct: 4   EQMLDVAVEEARKGLSEGGIPIGAALFSADGELLGSGHNRRVQDGDPSIHAETDAFRAAG 63

Query: 64  RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123
           R        +  +  TL PC  C+  +    I  L  G +    GG E         T  
Sbjct: 64  RQRG---YRKTIMVTTLSPCWYCSGLVRQFNIGALVIGEARTFSGGHEWLADNGVSVTL- 119

Query: 124 HSPEIYPGISEQRSRQIIQDF 144
                   + ++R   ++QDF
Sbjct: 120 --------LDDERCVTMMQDF 132


>gi|251771354|gb|EES51935.1| riboflavin biosynthesis protein RibD [Leptospirillum
           ferrodiazotrophum]
          Length = 397

 Score =  107 bits (268), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 34/150 (22%), Positives = 54/150 (36%), Gaps = 22/150 (14%)

Query: 4   GNVFMSCALEEAQNAAL--RNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
              +M  AL  A+           VGAV V + K++    +R    +    HAE+LA+R 
Sbjct: 10  DRRWMQRALVLAEKGRDTVAPNPMVGAVVVRDGKVVGEGYHREAGQE----HAEVLALRA 65

Query: 62  GCRILSQEILPEVDLYVTLEPC-------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
                  +      LYV LEPC         C  AI  A + R+     +P       G 
Sbjct: 66  AG-----DRARGATLYVNLEPCCHVEKRTPPCTEAIVQAGVARVVVAMRDPNPRVFGRGL 120

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
           +           ++  G+   R+ +  + F
Sbjct: 121 ERLAGQRL----DVSEGLFAARAFEQNRGF 146


>gi|313674792|ref|YP_004052788.1| cmp/dcmp deaminase zinc-binding protein [Marivirga tractuosa DSM
           4126]
 gi|312941490|gb|ADR20680.1| CMP/dCMP deaminase zinc-binding protein [Marivirga tractuosa DSM
           4126]
          Length = 138

 Score =  107 bits (268), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 36/142 (25%), Positives = 56/142 (39%), Gaps = 11/142 (7%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGC 63
             +M  A++ A+      + P GAV V    + +S   N         AHAEI AI    
Sbjct: 4   EFWMKLAIDLAK----ERKTPFGAVLVDPEGQHVS-GYNTTILDG-AVAHAEINAISK-I 56

Query: 64  RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT---LA 120
           + L  +   E+ L+ T+EPC MC +AI  A I  + YG          N          +
Sbjct: 57  KQLDYDRAEELTLFTTVEPCPMCMSAIIWAGIGEVIYGCDISTASKYGNQINIRAKKIAS 116

Query: 121 TCHHSPEIYPGISEQRSRQIIQ 142
              ++P I  G+       + +
Sbjct: 117 ESWYAPIIKGGLLAIECEGLFK 138


>gi|228959585|ref|ZP_04121266.1| Riboflavin biosynthesis protein [Bacillus thuringiensis serovar
           pakistani str. T13001]
 gi|228800077|gb|EEM47013.1| Riboflavin biosynthesis protein [Bacillus thuringiensis serovar
           pakistani str. T13001]
          Length = 358

 Score =  107 bits (268), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 43/146 (29%), Positives = 62/146 (42%), Gaps = 23/146 (15%)

Query: 8   MSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           M  ALE A  A      P   VG+V V +N+I+    +          HAEI AIRM   
Sbjct: 1   MKLALENA-KAMKGQTTPNPLVGSVIVNDNRIVGVGAHMKAGE----PHAEIHAIRMAG- 54

Query: 65  ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
               E      +YVTLEPC+       CA AI  A I+++     +P       G +   
Sbjct: 55  ----EQARGGTIYVTLEPCSHHGRTGPCAEAIVQAGIKKVVVATLDPNPLVSGRGIKILQ 110

Query: 119 LATCHHSPEIYPGISEQRSRQIIQDF 144
            A      E+  G+ E+ S+++ + F
Sbjct: 111 DAG----IEVLVGVCEEESKKMNEVF 132


>gi|296101536|ref|YP_003611682.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Enterobacter cloacae subsp. cloacae ATCC
           13047]
 gi|295055995|gb|ADF60733.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Enterobacter cloacae subsp. cloacae ATCC
           13047]
          Length = 367

 Score =  107 bits (268), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 35/155 (22%), Positives = 57/155 (36%), Gaps = 21/155 (13%)

Query: 3   KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +  ++M+ A++ AQ      +  P VG V V + +I+    +          HAE+ A+R
Sbjct: 2   QDEMYMARAMKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGFHYRAGE----PHAEVHALR 57

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           M               YVTLEPC        C  A+  A + R+     +P       G 
Sbjct: 58  MAGEKA-----RGATAYVTLEPCSHHGRTPPCCEALIAAGVSRVVAAMQDPNPQVAGRGL 112

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
                       ++  G+  Q +  I + F K  R
Sbjct: 113 YRLQQEG----IDVSHGLMMQDAEAINKGFLKRMR 143


>gi|163815505|ref|ZP_02206878.1| hypothetical protein COPEUT_01670 [Coprococcus eutactus ATCC 27759]
 gi|158449142|gb|EDP26137.1| hypothetical protein COPEUT_01670 [Coprococcus eutactus ATCC 27759]
          Length = 382

 Score =  107 bits (268), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 40/150 (26%), Positives = 56/150 (37%), Gaps = 21/150 (14%)

Query: 6   VFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
            +M  A+E A+      N  P VGAV V   +II    +          HAE    R   
Sbjct: 13  AYMRRAIELAKKGTGAVNPNPLVGAVIVKAGRIIGEGYHVRYGEL----HAE----RAAF 64

Query: 64  RILSQE-ILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116
             L+         +YVTLEPC        C  AI   +IR++Y G+ +P       G + 
Sbjct: 65  ASLADPAEAEGAVMYVTLEPCCHFGKQPPCVDAIIEHKIRKVYCGSDDPNAMVAGKGFRR 124

Query: 117 YTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
              A      E+Y    +     +   FFK
Sbjct: 125 LRDAG----IEVYTHCLKDECDALNDIFFK 150


>gi|134105070|pdb|2O7P|A Chain A, The Crystal Structure Of Ribd From Escherichia Coli In
           Complex With The Oxidised Nadp+ Cofactor In The Active
           Site Of The Reductase Domain
 gi|134105071|pdb|2O7P|B Chain B, The Crystal Structure Of Ribd From Escherichia Coli In
           Complex With The Oxidised Nadp+ Cofactor In The Active
           Site Of The Reductase Domain
          Length = 380

 Score =  107 bits (268), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 34/155 (21%), Positives = 56/155 (36%), Gaps = 21/155 (13%)

Query: 3   KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +   + + AL+ AQ      +  P VG V V + +I+    ++         HAE+ A+R
Sbjct: 7   QDEYYXARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGE----PHAEVHALR 62

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
                           YVTLEPC        C  A+  A + R+     +P       G 
Sbjct: 63  XAGEKA-----KGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVASXQDPNPQVAGRGL 117

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
                A      ++  G+    + Q+ + F K  R
Sbjct: 118 YRLQQAG----IDVSHGLXXSEAEQLNKGFLKRXR 148


>gi|53804252|ref|YP_114101.1| riboflavin biosynthesis protein RibD [Methylococcus capsulatus str.
           Bath]
 gi|53758013|gb|AAU92304.1| riboflavin biosynthesis protein RibD [Methylococcus capsulatus str.
           Bath]
          Length = 378

 Score =  107 bits (268), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 38/155 (24%), Positives = 63/155 (40%), Gaps = 21/155 (13%)

Query: 3   KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           + + FM+ AL  A+      +  P VG+V V  N+++    ++         HAEI A+R
Sbjct: 17  EDHCFMAHALRLAEKGMYTTDPNPRVGSVVVQGNEVVGAGWHQRAGG----PHAEIAALR 72

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
                  +       +YVTLEPC        CA A+  A + R+     +P       G 
Sbjct: 73  DA-----RGRAAGATVYVTLEPCSHHGRTPPCADALIEAGVHRVVAAMQDPNPRVAGQGL 127

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
           +    A      E+  G+  + + ++ Q F K  R
Sbjct: 128 ERLRRAG----IEVSCGLLAREAERLNQGFVKRMR 158


>gi|291279486|ref|YP_003496321.1| bifunctional riboflavin biosynthesis protein RibD [Deferribacter
           desulfuricans SSM1]
 gi|290754188|dbj|BAI80565.1| bifunctional riboflavin biosynthesis protein RibD [Deferribacter
           desulfuricans SSM1]
          Length = 384

 Score =  107 bits (268), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 44/152 (28%), Positives = 62/152 (40%), Gaps = 21/152 (13%)

Query: 1   MKKGNVFMSCALEEAQ--NAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           M K +  M   ++ A       +    VGA+ V + KII R  +         +HAEI A
Sbjct: 1   MIKPHDIMKECVQLALLGKGYTKTNPIVGAIIVKDGKIIGRGYHEEYGK----SHAEINA 56

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
           +         E L   DLYVTLEPC        C  AI   +I+R++ G  +P       
Sbjct: 57  MNDAV-----EPLEGADLYVTLEPCSIHGKTPPCVDAIIENKIKRVFIGVVDPNPKIAGQ 111

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
           G      A      E++ G  E+    II+DF
Sbjct: 112 GIIKLIEAG----VEVFVGFDEELCASIIEDF 139


>gi|257067810|ref|YP_003154065.1| cytosine/adenosine deaminase [Brachybacterium faecium DSM 4810]
 gi|256558628|gb|ACU84475.1| cytosine/adenosine deaminase [Brachybacterium faecium DSM 4810]
          Length = 158

 Score =  107 bits (268), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 33/93 (35%), Positives = 44/93 (47%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           +  A+E A  +  R   P GAV +  +       NR     D TAHAE+ AIR  CR   
Sbjct: 10  LHRAVELAVASVARGGGPFGAVVLTADGTAVEGANRVTAAHDPTAHAEVEAIREACRRSG 69

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
              L    LY + EPC MC A+   AR+ R+ +
Sbjct: 70  SHELRGAVLYASCEPCPMCLASALWARVERVEF 102


>gi|281424669|ref|ZP_06255582.1| riboflavin biosynthesis protein RibD [Prevotella oris F0302]
 gi|281401039|gb|EFB31870.1| riboflavin biosynthesis protein RibD [Prevotella oris F0302]
          Length = 318

 Score =  106 bits (267), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 39/150 (26%), Positives = 59/150 (39%), Gaps = 17/150 (11%)

Query: 3   KGNVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +   +M   L+ A+N          VGAV V +++II    +          HAE+ A  
Sbjct: 2   EHEYYMKRCLQLAENGRQNAKPNPMVGAVIVAHDRIIGEGYHVRCGEG----HAEVNAF- 56

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
              R   +++LPE  +YV+LEPC        CA  I    I+R   G  +P       G 
Sbjct: 57  ASVRPEDEKLLPEATIYVSLEPCSHYGKTPPCADLIISKGIKRCVCGCVDPFAKVQGRGI 116

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
           Q    A      E+   + EQ    + + F
Sbjct: 117 QRMRDAG----IEVVVDVMEQECLALNRRF 142


>gi|160876409|ref|YP_001555725.1| riboflavin biosynthesis protein RibD [Shewanella baltica OS195]
 gi|160861931|gb|ABX50465.1| riboflavin biosynthesis protein RibD [Shewanella baltica OS195]
 gi|315268599|gb|ADT95452.1| riboflavin biosynthesis protein RibD [Shewanella baltica OS678]
          Length = 384

 Score =  106 bits (267), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 37/152 (24%), Positives = 56/152 (36%), Gaps = 21/152 (13%)

Query: 4   GNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
               MS A++ A+         P VG V V +N+I+    ++         HAE+ A+RM
Sbjct: 11  DTQMMSRAIQLARKGFYTTRPNPCVGCVIVKDNQIVGEGYHQKAGE----PHAEVHALRM 66

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
                  E       YVTLEPC        CA A+    ++R+     +P       G Q
Sbjct: 67  AG-----EHARGATAYVTLEPCSHYGRTPPCALALINIGVKRVVVAVEDPNPQVGGRGIQ 121

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
               A      E+  G+    +  +   F K 
Sbjct: 122 MLRDAG----IEVDVGLHRDEAYALNLGFMKR 149


>gi|114046668|ref|YP_737218.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase /
           diaminohydroxyphosphoribosylaminopyrimidine deaminase
           [Shewanella sp. MR-7]
 gi|113888110|gb|ABI42161.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase /
           diaminohydroxyphosphoribosylaminopyrimidine deaminase
           [Shewanella sp. MR-7]
          Length = 381

 Score =  106 bits (267), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 36/152 (23%), Positives = 57/152 (37%), Gaps = 21/152 (13%)

Query: 4   GNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
            N  MS A++ A+      R    VG V V +N+I+    ++         HAE+ A+RM
Sbjct: 7   DNQMMSRAIQLARKGFYTTRPNPSVGCVIVKDNQIVGEGYHQKAGE----PHAEVHALRM 62

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
              +           YVTLEPC        CA A+    ++R+     +P       G Q
Sbjct: 63  AGELA-----RGATAYVTLEPCSHYGRTPPCALALINIGVKRVVVAVEDPNPQVGGRGIQ 117

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
               A      ++  G+    +  +   F K 
Sbjct: 118 MLRDAG----IQVDVGLHRDEAYALNLGFMKR 145


>gi|58698891|ref|ZP_00373757.1| riboflavin biosynthesis protein RibD [Wolbachia endosymbiont of
           Drosophila ananassae]
 gi|58534587|gb|EAL58720.1| riboflavin biosynthesis protein RibD [Wolbachia endosymbiont of
           Drosophila ananassae]
          Length = 167

 Score =  106 bits (267), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 37/153 (24%), Positives = 59/153 (38%), Gaps = 25/153 (16%)

Query: 3   KGNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
             + FMS AL  A+       +   P VG V V +  I+S              HAE++A
Sbjct: 2   TDDHFMSIALRLAEKNL--GNVAPNPAVGCVIVKDGTIVSEGY----TGIGGRPHAEVVA 55

Query: 59  IRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIEN 112
           ++               +Y+TLEPC        C A I  A I+R+     +P       
Sbjct: 56  LQNAKDSTH-----GATIYITLEPCCHHGVTGPCTAKIIKASIKRVVIATIDPDSRVSGR 110

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
           G +    A      E+  GI ++ ++++   FF
Sbjct: 111 GMKALKEAG----IEVEQGIMQKEAKELNVGFF 139


>gi|270339625|ref|ZP_06005479.2| riboflavin biosynthesis protein RibD [Prevotella bergensis DSM
           17361]
 gi|270334334|gb|EFA45120.1| riboflavin biosynthesis protein RibD [Prevotella bergensis DSM
           17361]
          Length = 365

 Score =  106 bits (267), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 38/151 (25%), Positives = 57/151 (37%), Gaps = 18/151 (11%)

Query: 3   KGNVFMSCALEEAQNAALRN--EIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAI 59
               +M   L+ A+N          VGAV V  + +II    +          HAE+ A 
Sbjct: 28  TDERYMRRCLQLARNGWQNAKPNPMVGAVIVSRDGRIIGEGYHVRCGEG----HAEVNAF 83

Query: 60  RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113
               R   + +L E  +YV+LEPC        CA  I    +RR+  G  +P       G
Sbjct: 84  -ASVRPEDEVLLKESTVYVSLEPCSHWGKTPPCADLIVKKGVRRVVCGCIDPFSKVQGRG 142

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
                 A      E+  G+ EQ   ++ + F
Sbjct: 143 VAHIRKAG----IEVTVGVLEQECLELNRRF 169


>gi|218283800|ref|ZP_03489723.1| hypothetical protein EUBIFOR_02317 [Eubacterium biforme DSM 3989]
 gi|218215606|gb|EEC89144.1| hypothetical protein EUBIFOR_02317 [Eubacterium biforme DSM 3989]
          Length = 389

 Score =  106 bits (267), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 36/151 (23%), Positives = 55/151 (36%), Gaps = 21/151 (13%)

Query: 3   KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
               +M  A++ A+      N  P VGAV V + +II    ++         HAE  AI 
Sbjct: 16  TDQEYMLRAIQLAKKGEGWTNPNPMVGAVIVKDGRIIGEGYHKKYGEL----HAERNAI- 70

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
                   E      +YVTLEPC        C  AI   +I+++  G+ +P       G 
Sbjct: 71  ----ASLTESAEGAVIYVTLEPCCHHGKTPPCTEAIIEQKIKKVVIGSRDPNPKVAGKGV 126

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
           Q    A       +      +   ++   FF
Sbjct: 127 QMLRKAG----VTVVEDFMGEECDRLNPVFF 153


>gi|85058629|ref|YP_454331.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Sodalis glossinidius str. 'morsitans']
 gi|84779149|dbj|BAE73926.1| riboflavin biosynthesis protein RibD [Sodalis glossinidius str.
           'morsitans']
          Length = 375

 Score =  106 bits (267), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 37/157 (23%), Positives = 56/157 (35%), Gaps = 21/157 (13%)

Query: 1   MKKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           M    V+++ A E A+         P VG V V + +I+    ++        AHAE+ A
Sbjct: 1   MDHDEVYLARAFELARRGRFTTAPNPNVGCVIVRDGRIVGEGYHQRAGY----AHAEVHA 56

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
           +R                YVTLEPC        CA A+  A + R+     +P       
Sbjct: 57  LRQAGNAARC-----ATAYVTLEPCSHHGRTPPCADALIDAGVARVVAAMPDPNPQVAGR 111

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
           G      A      E+  G+    +  +   F K  R
Sbjct: 112 GFYRLQQAG----IEVRHGLMLPEAEAVNPGFLKRMR 144


>gi|228998898|ref|ZP_04158483.1| RibD (Riboflavin-specific deaminase) [Bacillus mycoides Rock3-17]
 gi|228760914|gb|EEM09875.1| RibD (Riboflavin-specific deaminase) [Bacillus mycoides Rock3-17]
          Length = 370

 Score =  106 bits (267), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 33/151 (21%), Positives = 57/151 (37%), Gaps = 21/151 (13%)

Query: 3   KGNVFMSCALEEAQ-NAALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
               +M  AL+ AQ  A   +  P VGAV V +  I+    +     +    HAE+ A+R
Sbjct: 2   TDQEYMRIALQLAQSTAGQTSPNPMVGAVVVKDGNIVGMGAHLRAGEE----HAEVHALR 57

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           M              +YVTLEPC        C   +   +++R+     +       +G 
Sbjct: 58  MAGDKA-----NGSTVYVTLEPCSHFGKTPPCCDLLIEKKVKRVVIATLDCNPLVSGSGA 112

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
           +    A       +   + E+ +  + + FF
Sbjct: 113 KRLQKAG----ISVTTSVLEEEATALNRYFF 139


>gi|229080603|ref|ZP_04213123.1| Riboflavin biosynthesis protein [Bacillus cereus Rock4-2]
 gi|228702704|gb|EEL55170.1| Riboflavin biosynthesis protein [Bacillus cereus Rock4-2]
          Length = 360

 Score =  106 bits (267), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 43/146 (29%), Positives = 62/146 (42%), Gaps = 23/146 (15%)

Query: 8   MSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           M  ALE A  A      P   VG+V V +N+I+    +          HAEI AIRM   
Sbjct: 1   MKLALENA-KAMKGQTTPNPLVGSVIVNDNRIVGVGAHMKAGE----PHAEIHAIRMAG- 54

Query: 65  ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
               E      +YVTLEPC+       CA AI  A I+++     +P       G +   
Sbjct: 55  ----EQARGGTIYVTLEPCSHHGRTGPCAEAIVQAGIKKVVVATLDPNPLVSGRGIKILQ 110

Query: 119 LATCHHSPEIYPGISEQRSRQIIQDF 144
            A      E+  G+ E+ S+++ + F
Sbjct: 111 DAG----IEVLVGVCEEESKKMNEVF 132


>gi|289647764|ref|ZP_06479107.1| riboflavin biosynthesis protein RibD [Pseudomonas syringae pv.
           aesculi str. 2250]
          Length = 378

 Score =  106 bits (267), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 36/152 (23%), Positives = 56/152 (36%), Gaps = 21/152 (13%)

Query: 4   GNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
              +M+ ALE A+N          VG V V + +I+    +          HAE+ A+R 
Sbjct: 9   DVHYMARALELARNGLYSTHPNPRVGCVIVRDGQIVGEGWHVRAGE----PHAEVHALRQ 64

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
              +           YVTLEPC        CA A+  A + R+     +P       G  
Sbjct: 65  AGELA-----RGATAYVTLEPCSHQGRTPPCADALVNAGLARVVAAMQDPNPDVSGRGL- 118

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
              L   +    +  G+ E  +R + + F K 
Sbjct: 119 ---LRLMNAGIGVQCGVLESEARALNKGFLKR 147


>gi|289675578|ref|ZP_06496468.1| riboflavin biosynthesis protein RibD [Pseudomonas syringae pv.
           syringae FF5]
          Length = 194

 Score =  106 bits (267), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 35/152 (23%), Positives = 54/152 (35%), Gaps = 21/152 (13%)

Query: 4   GNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
              +M+ ALE A+           VG V V   +I+    +          HAE+ A+R 
Sbjct: 9   DVHYMARALELARKGLYSTHPNPRVGCVIVREGRIVGEGWHARAGE----PHAEVHALRQ 64

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
              +           YVTLEPC        CA A+  A + R+     +P       G  
Sbjct: 65  AGELA-----RGATAYVTLEPCSHQGRTPPCADALIEAGLTRVVAAMQDPNPEVSGRGL- 118

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
              L   +    +  G+ E  +R + + F K 
Sbjct: 119 ---LRLMNAGISVQCGVLESEARALNKGFLKR 147


>gi|317047149|ref|YP_004114797.1| riboflavin biosynthesis protein RibD [Pantoea sp. At-9b]
 gi|316948766|gb|ADU68241.1| riboflavin biosynthesis protein RibD [Pantoea sp. At-9b]
          Length = 370

 Score =  106 bits (267), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 36/154 (23%), Positives = 53/154 (34%), Gaps = 21/154 (13%)

Query: 4   GNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
              +M+ ALE A+         P VG V V + +I+    +          HAE+ A+RM
Sbjct: 3   DERYMARALELARRGCFTTTPNPNVGCVIVRDGEIVGEGWHHRAGE----PHAEVHALRM 58

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
                          YVTLEPC        C  A+  A + R+     +P       G  
Sbjct: 59  AGEKA-----RGATAYVTLEPCSHHGRTPPCCDALIAAGVSRVVAAMQDPNPQVAGRGLY 113

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
               A       +  G+    +  I + F K  R
Sbjct: 114 RLQQAG----IAVSHGLMMNAAEAINRGFLKRMR 143


>gi|52425429|ref|YP_088566.1| RibD protein [Mannheimia succiniciproducens MBEL55E]
 gi|52307481|gb|AAU37981.1| RibD protein [Mannheimia succiniciproducens MBEL55E]
          Length = 373

 Score =  106 bits (267), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 34/156 (21%), Positives = 60/156 (38%), Gaps = 21/156 (13%)

Query: 2   KKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
           ++   FM  A+E A+         P VG V V   +I+ +  +          HAE++A+
Sbjct: 6   EQDRAFMQLAIELAEKGQFTTTPNPSVGCVLVKQGEIVGKGFHFKAGE----PHAEVMAM 61

Query: 60  RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113
           R   +            YVTLEPC        CA  +  A + ++     +P       G
Sbjct: 62  REAGK-----NAKGATAYVTLEPCSHFGRTPPCAKGLIEAGVVKVIAAMEDPNPSVAGQG 116

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +    A      E   G+ ++++ ++ + F K  R
Sbjct: 117 LKMLQQAG----IETAVGLLQEQAERLNRGFLKRMR 148


>gi|260596783|ref|YP_003209354.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Cronobacter turicensis z3032]
 gi|260215960|emb|CBA28583.1| Riboflavin biosynthesis protein ribD [Cronobacter turicensis z3032]
          Length = 367

 Score =  106 bits (267), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 34/155 (21%), Positives = 51/155 (32%), Gaps = 21/155 (13%)

Query: 3   KGNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
               +M+ AL+ A            VG V V +  I+    +          HAE+ A+R
Sbjct: 2   SDEFYMARALKLASQGRFTTHPNPRVGCVIVNDGVIVGEGFHLRAGE----PHAEVHALR 57

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           M               YVTLEPC        C  A+  A + R+     +P       G 
Sbjct: 58  MAGDKA-----RGATAYVTLEPCSHHGRTPPCCDALINAGVARVVAAMQDPNPQVAGRGL 112

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
                A      E+  G+    +  + + F K  R
Sbjct: 113 YRLQQAG----VEVSHGLMMSEAEALNKGFLKRMR 143


>gi|226314399|ref|YP_002774295.1| riboflavin biosynthesis protein RibD [Brevibacillus brevis NBRC
           100599]
 gi|226097349|dbj|BAH45791.1| riboflavin biosynthesis protein RibD [Brevibacillus brevis NBRC
           100599]
          Length = 368

 Score =  106 bits (267), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 43/160 (26%), Positives = 69/160 (43%), Gaps = 24/160 (15%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           M++ + +M  ALE A++A  +    P VGAV V +  I+    +          HAE+ A
Sbjct: 1   MEQDSKYMDLALELARSARGQTSPNPMVGAVIVKDGTIVGMGAHLRAGE----PHAEVHA 56

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
           +RM              +YVTLEPC        CA A+  A +RR+     +P       
Sbjct: 57  LRMAGEKAQ-----GATVYVTLEPCSHYGKTPPCAEALIAAAVRRVVVATLDPNPLVAGR 111

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF---KERR 149
           G +    A      E+  G+ E+ ++ + + FF   + RR
Sbjct: 112 GMEMLRAAG----VEVAVGVREEEAKALNEVFFHYIQTRR 147


>gi|119945176|ref|YP_942856.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase
           and 5-amino-6-(5-phosphoribosylamino) uracil reductase
           [Psychromonas ingrahamii 37]
 gi|119863780|gb|ABM03257.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Psychromonas ingrahamii 37]
          Length = 387

 Score =  106 bits (267), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 35/152 (23%), Positives = 60/152 (39%), Gaps = 21/152 (13%)

Query: 4   GNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
              +M+ A+  A+      +  P VG V V NN I+    ++   L     HAE+ A+ +
Sbjct: 10  DKYYMAHAILLAKKGRFTSSPNPNVGCVIVANNIIVGEGYHQKAGLG----HAEVNALAI 65

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
                          YVTLEPC        CA A++ A I+R+     +P      +G +
Sbjct: 66  AKDKAM-----GATCYVTLEPCSHFGRTPPCALALTKAGIKRVIIAMVDPNPKVAGDGIK 120

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
               A      ++  G+ +  +  + + F K 
Sbjct: 121 ILEKAG----IKVDLGLLKNEAMDLNRGFIKR 148


>gi|291545679|emb|CBL18787.1| riboflavin biosynthesis protein RibD [Ruminococcus sp. SR1/5]
          Length = 253

 Score =  106 bits (267), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 37/151 (24%), Positives = 54/151 (35%), Gaps = 21/151 (13%)

Query: 3   KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
               +M  A++ A+      N  P VGAV V + +II    ++         HAE  AI 
Sbjct: 2   TDQEYMLRAIQLAKKGEGWTNPNPMVGAVIVKDGRIIGEGYHKKYGEL----HAERNAI- 56

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
                   E      +YVTLEPC        C   I   +IR++  G+ +P       G 
Sbjct: 57  ----ASLTEPAEGAVIYVTLEPCCHHGKTPPCTETIIEQKIRKVVIGSRDPNPKVAGKGV 112

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
           Q    A       +      +   Q+   FF
Sbjct: 113 QMLREAG----VTVVEDFMREECDQLNPVFF 139


>gi|330988221|gb|EGH86324.1| riboflavin biosynthesis protein RibD [Pseudomonas syringae pv.
           lachrymans str. M301315]
          Length = 378

 Score =  106 bits (267), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 36/152 (23%), Positives = 56/152 (36%), Gaps = 21/152 (13%)

Query: 4   GNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
              +M+ ALE A+N          VG V V + +I+    +          HAE+ A+R 
Sbjct: 9   DVHYMARALELARNGLYSTHPNPRVGCVIVRDGQIVGEGWHVRAGE----PHAEVHALRQ 64

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
              +           YVTLEPC        CA A+  A + R+     +P       G  
Sbjct: 65  AGELA-----RGATAYVTLEPCSHQGRTPPCADALVNAGLARVVAAMQDPNPEVSGRGL- 118

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
              L   +    +  G+ E  +R + + F K 
Sbjct: 119 ---LRLMNAGIGVQCGVLESEARALNKGFLKR 147


>gi|71735090|ref|YP_276623.1| riboflavin biosynthesis protein RibD [Pseudomonas syringae pv.
           phaseolicola 1448A]
 gi|71555643|gb|AAZ34854.1| riboflavin biosynthesis protein RibD [Pseudomonas syringae pv.
           phaseolicola 1448A]
 gi|320322801|gb|EFW78894.1| riboflavin biosynthesis protein RibD [Pseudomonas syringae pv.
           glycinea str. B076]
 gi|320330413|gb|EFW86392.1| riboflavin biosynthesis protein RibD [Pseudomonas syringae pv.
           glycinea str. race 4]
 gi|330874037|gb|EGH08186.1| riboflavin biosynthesis protein RibD [Pseudomonas syringae pv.
           glycinea str. race 4]
          Length = 378

 Score =  106 bits (267), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 36/152 (23%), Positives = 56/152 (36%), Gaps = 21/152 (13%)

Query: 4   GNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
              +M+ ALE A+N          VG V V + +I+    +          HAE+ A+R 
Sbjct: 9   DVHYMARALELARNGLYSTHPNPRVGCVIVRDGQIVGEGWHVRAGE----PHAEVHALRQ 64

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
              +           YVTLEPC        CA A+  A + R+     +P       G  
Sbjct: 65  AGELA-----RGATAYVTLEPCSHQGRTPPCADALVNAGLARVVAAMQDPNPEVSGRGL- 118

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
              L   +    +  G+ E  +R + + F K 
Sbjct: 119 ---LRLMNAGIGVQCGVLESEARALNKGFLKR 147


>gi|113969440|ref|YP_733233.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Shewanella sp. MR-4]
 gi|113884124|gb|ABI38176.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Shewanella sp. MR-4]
          Length = 381

 Score =  106 bits (267), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 36/152 (23%), Positives = 57/152 (37%), Gaps = 21/152 (13%)

Query: 4   GNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
            N  MS A++ A+      R    VG V V +N+I+    ++         HAE+ A+RM
Sbjct: 7   DNQMMSRAIQLARKGFYTTRPNPSVGCVIVKDNQIVGEGYHQKAGE----PHAEVHALRM 62

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
              +           YVTLEPC        CA A+    ++R+     +P       G Q
Sbjct: 63  AGELA-----RGATAYVTLEPCSHYGRTPPCALALINIGVKRVVVAVEDPNPQVGGRGIQ 117

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
               A      ++  G+    +  +   F K 
Sbjct: 118 MLRDAG----IQVDVGLHRDEAYALNLGFMKR 145


>gi|157694276|ref|YP_001488738.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Bacillus pumilus SAFR-032]
 gi|157683034|gb|ABV64178.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Bacillus pumilus SAFR-032]
          Length = 363

 Score =  106 bits (267), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 41/154 (26%), Positives = 63/154 (40%), Gaps = 25/154 (16%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56
           M     +M+ ALE A+  A++ +    P VGAV V  N+I+    +          HAEI
Sbjct: 1   MPHHERYMNLALENAR--AMKGQTSPNPLVGAVIVRENEIVGVGAHMKAGE----PHAEI 54

Query: 57  LAIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGI 110
            A++M              +YVTLEPC+       CA A+  A +  +   A +P     
Sbjct: 55  HALKMAGDKA-----KGATIYVTLEPCSHHGRTGPCAEALVKAGVETVVVAALDPNPLVA 109

Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
             G      A      ++  G+ EQ S  + + F
Sbjct: 110 GRGIAILQDAG----IQVITGVLEQESILMNEVF 139


>gi|120405009|ref|YP_954838.1| CMP/dCMP deaminase [Mycobacterium vanbaalenii PYR-1]
 gi|119957827|gb|ABM14832.1| CMP/dCMP deaminase, zinc-binding protein [Mycobacterium vanbaalenii
           PYR-1]
          Length = 164

 Score =  106 bits (267), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 32/141 (22%), Positives = 52/141 (36%), Gaps = 13/141 (9%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +  A+EEA+       IP+GA     +  ++    NR  +L D + HAE  A R   R  
Sbjct: 25  LEVAVEEARKGLAEGGIPIGAALFSTDGALLGSGHNRRVQLGDPSVHAETDAFRNAGRQR 84

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
                    +  TL PC  C+  +    I  +  G S    GG +         T     
Sbjct: 85  G---YRSTIMVTTLSPCWYCSGLVRQFNIGAVVIGESRTFTGGHDWLADNGVDVTI---- 137

Query: 127 EIYPGISEQRSRQIIQDFFKE 147
                + ++R   +++DF   
Sbjct: 138 -----VDDERCVTMMRDFIAA 153


>gi|255020757|ref|ZP_05292816.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase /
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Acidithiobacillus caldus ATCC 51756]
 gi|254969819|gb|EET27322.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase /
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Acidithiobacillus caldus ATCC 51756]
          Length = 369

 Score =  106 bits (267), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 35/150 (23%), Positives = 53/150 (35%), Gaps = 21/150 (14%)

Query: 8   MSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M+ AL  A+           VGAV V + +I+ R  +         AHAE+ A+      
Sbjct: 1   MAEALTLARRGLYSTHPNPRVGAVVVRDGQIVGRGAHLRAGD----AHAEVFALAQAG-- 54

Query: 66  LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
              E      LYVTLEPC        C  AI  A + R+    ++P       G      
Sbjct: 55  ---ERARGATLYVTLEPCCHHGRTPPCTDAILTAGVARVVIAIADPNPRVRGGGIALLQQ 111

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
                  ++  G   + +  +   F +  R
Sbjct: 112 QGL----QVELGCLAEEATALNIGFVRRMR 137


>gi|148544108|ref|YP_001271478.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Lactobacillus reuteri DSM 20016]
 gi|184153479|ref|YP_001841820.1| riboflavin biosynthesis protein [Lactobacillus reuteri JCM 1112]
 gi|148531142|gb|ABQ83141.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Lactobacillus reuteri DSM 20016]
 gi|183224823|dbj|BAG25340.1| riboflavin biosynthesis protein [Lactobacillus reuteri JCM 1112]
          Length = 352

 Score =  106 bits (267), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 41/153 (26%), Positives = 61/153 (39%), Gaps = 22/153 (14%)

Query: 3   KGNVFMSCALEEAQNAA-LRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +   FM  A+ EA  A     + P VGAV V N ++++R             HAE  AI 
Sbjct: 2   EDAYFMQMAIAEAAKAGNETWKNPRVGAVVVKNGQVLARGHTHEYGGI----HAERDAI- 56

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
                L+ +      LYVTLEPC        C+ AI  A IRR+    ++P       G 
Sbjct: 57  ---GKLTPKQGQGATLYVTLEPCNHYGKQPPCSQAIIDAGIRRVVIAETDPHKLVTGKGI 113

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQ--DFF 145
                        +  G+ ++ ++ +    DFF
Sbjct: 114 ATLQQQN----IIVKTGVLKEAAQALNPYYDFF 142


>gi|117619328|ref|YP_857822.1| riboflavin biosynthesis protein RibD [Aeromonas hydrophila subsp.
           hydrophila ATCC 7966]
 gi|117560735|gb|ABK37683.1| riboflavin biosynthesis protein RibD [Aeromonas hydrophila subsp.
           hydrophila ATCC 7966]
          Length = 369

 Score =  106 bits (267), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 36/156 (23%), Positives = 55/156 (35%), Gaps = 21/156 (13%)

Query: 2   KKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
           +    +MS ALE A+         P VGAV V    ++    ++         HAE+ A+
Sbjct: 4   QDDYQWMSRALELARRGRYTTAPNPCVGAVLVKAGVVVGEGWHQRAGE----PHAEVYAL 59

Query: 60  RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113
                    +       YVTLEPC        CA A+  A + R+     +P       G
Sbjct: 60  HAAG-----DNARGATAYVTLEPCSHHGRTPPCAEALIKAGVTRVVAAMVDPNPQVGGRG 114

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +  + A          G+    +  +   FFK  R
Sbjct: 115 LRMLSEAGIKTDF----GLLASEAEALNPGFFKRMR 146


>gi|309389474|gb|ADO77354.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase;
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Halanaerobium praevalens DSM 2228]
          Length = 379

 Score =  106 bits (267), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 36/152 (23%), Positives = 60/152 (39%), Gaps = 21/152 (13%)

Query: 3   KGNVFMSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
               +M  AL+ A  A  +    P VGAV V N +II    ++    +    HAE+ A+ 
Sbjct: 7   SDQKYMDRALKLAALAVGKTSPNPLVGAVIVKNGEIIGEGYHQKYGAQ----HAEVNALA 62

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
                         +L+V LEPC        C  AI  + ++R+     +P       G 
Sbjct: 63  KAG-----FKAEGAELFVNLEPCSHFGKTPPCTQAIIASGLKRVVVALVDPNPQVAGRGI 117

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
           +    A      EI  G+   +++++ + F K
Sbjct: 118 KQLRKAGI--KVEI--GLLAAKAKKLNEIFLK 145


>gi|229086682|ref|ZP_04218850.1| RibD (Riboflavin-specific deaminase) [Bacillus cereus Rock3-44]
 gi|228696629|gb|EEL49446.1| RibD (Riboflavin-specific deaminase) [Bacillus cereus Rock3-44]
          Length = 379

 Score =  106 bits (267), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 33/151 (21%), Positives = 58/151 (38%), Gaps = 21/151 (13%)

Query: 3   KGNVFMSCALEEAQ-NAALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
               +M+ AL+ A+  +   +  P VGAV V +  I+    +     +    HAE+ AI 
Sbjct: 11  TDQEYMNIALQLAESTSGQTSPNPMVGAVVVKDGNIVGMGAHLRAGEE----HAEVHAIH 66

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           M              +YVTLEPC        C   +   R++R+     +       +G 
Sbjct: 67  MAGDKAY-----GSTVYVTLEPCSHFGKTPPCCDLLIEKRVKRVVIATLDCNPLVSGSGA 121

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
           +    A       +  G+ E+ +  + + FF
Sbjct: 122 RRLQEAG----ISVTTGVLEEEATTLNRYFF 148


>gi|320538258|ref|ZP_08038144.1| riboflavin biosynthesis protein RibD [Treponema phagedenis F0421]
 gi|320144885|gb|EFW36615.1| riboflavin biosynthesis protein RibD [Treponema phagedenis F0421]
          Length = 362

 Score =  106 bits (266), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 40/146 (27%), Positives = 59/146 (40%), Gaps = 21/146 (14%)

Query: 8   MSCALEEAQN-AALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M  AL+ A+  A   +  P VGAV V N KII    +          HAE  A+R     
Sbjct: 1   MRTALQFAKKGAGWTSPNPMVGAVIVKNGKIIGSGFHERYGE----PHAERNALRA---- 52

Query: 66  LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
              E      LYVTLEPC        C  A+  + I R+  G+++P       G +    
Sbjct: 53  -CTETPAGATLYVTLEPCCHHGKQPPCVDAVLESGITRVVIGSADPNPLVGGKGVRRLKE 111

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFF 145
           +      E+   I ++   ++ + FF
Sbjct: 112 SG----IEVSENILKEECDRLNEVFF 133


>gi|238795566|ref|ZP_04639081.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Yersinia
           mollaretii ATCC 43969]
 gi|238720685|gb|EEQ12486.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Yersinia
           mollaretii ATCC 43969]
          Length = 369

 Score =  106 bits (266), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 36/157 (22%), Positives = 54/157 (34%), Gaps = 21/157 (13%)

Query: 1   MKKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           M+    +M+ A E A+         P VG V V + +I+    +          HAE+ A
Sbjct: 1   MQPDEFYMARAFELARMGCFTTPPNPNVGCVLVRDGEIVGEGYHLRAGE----PHAEVHA 56

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
           +RM               YVTLEPC        CA A+  A + R+     +P       
Sbjct: 57  LRMAGEKAH-----GATAYVTLEPCSHHGRTPPCADALVAAGVIRVVAAMQDPNPQVAGR 111

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
           G      A       +  G+    +  +   F K  R
Sbjct: 112 GLYKLKQAG----IAVDHGLMLAEAEAVNLGFLKRMR 144


>gi|330943560|gb|EGH45897.1| riboflavin biosynthesis protein RibD [Pseudomonas syringae pv. pisi
           str. 1704B]
          Length = 245

 Score =  106 bits (266), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 35/152 (23%), Positives = 54/152 (35%), Gaps = 21/152 (13%)

Query: 4   GNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
              +M+ ALE A+           VG V V   +I+    +          HAE+ A+R 
Sbjct: 9   DVHYMARALELARKGLYSTHPNPRVGCVIVREGRIVGEGWHARAGE----PHAEVHALRQ 64

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
              +           YVTLEPC        CA A+  A + R+     +P       G  
Sbjct: 65  AGELA-----RGATAYVTLEPCSHQGRTPPCADALIEAGLTRVVAAMQDPNPEVSGRGL- 118

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
              L   +    +  G+ E  +R + + F K 
Sbjct: 119 ---LRLMNAGIGVQCGVLESEARALNKGFLKR 147


>gi|330903491|gb|EGH34063.1| cytosine deaminase [Pseudomonas syringae pv. japonica str.
           M301072PT]
          Length = 125

 Score =  106 bits (266), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 32/126 (25%), Positives = 52/126 (41%), Gaps = 12/126 (9%)

Query: 24  IPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83
           +P+G+V     KII R  NR  +    T H E+ A+    R  +  +  +  LY TL PC
Sbjct: 1   MPIGSVIGHGGKIIGRGHNRRVQEGSATKHGEMDALENAGRQPAS-VYRDSVLYTTLSPC 59

Query: 84  TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQ-RSRQIIQ 142
            MC+ AI L  IR++  G +    G  E                +   + +      +++
Sbjct: 60  AMCSGAILLYGIRKVIIGENESFMGEEE----LLRSRG------VQIDVLDNPECTHMMK 109

Query: 143 DFFKER 148
           DF   +
Sbjct: 110 DFIASK 115


>gi|212638856|ref|YP_002315376.1| riboflavin-specific pyrimidine reductase/deaminase [Anoxybacillus
           flavithermus WK1]
 gi|212560336|gb|ACJ33391.1| Riboflavin-specific pyrimidine reductase/deaminase [Anoxybacillus
           flavithermus WK1]
          Length = 358

 Score =  106 bits (266), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 35/150 (23%), Positives = 62/150 (41%), Gaps = 21/150 (14%)

Query: 4   GNVFMSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
              +M  AL+ AQ+A  +    P VGAV V + +I+    +          HAE+ A+RM
Sbjct: 2   DEQYMRFALQLAQSARGQTSPNPLVGAVVVKHGEIVGFGAHLKAGE----PHAEVHALRM 57

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
                         +YVTLEPC        CA  +   +++R+    ++P       G +
Sbjct: 58  AGEKA-----EGATVYVTLEPCSHYGRTPPCADLLIEKKVKRVVVATTDPNPLVAGKGIE 112

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
               A      ++  G+ ++ +  + + FF
Sbjct: 113 KLKRAG----IDVTVGVLKEEADALNEMFF 138


>gi|332687244|ref|YP_004457018.1| cytosine deaminase [Melissococcus plutonius ATCC 35311]
 gi|332371253|dbj|BAK22209.1| cytosine deaminase [Melissococcus plutonius ATCC 35311]
          Length = 164

 Score =  106 bits (266), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 26/106 (24%), Positives = 41/106 (38%), Gaps = 1/106 (0%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIR 60
           K    ++   +E ++ A      P GA+ V +   I+    N        T HAE     
Sbjct: 8   KDHLYYLKRCIEISKQAKKNGNTPFGALLVDDAGNILFEQENIEITEHICTGHAETTLAA 67

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPK 106
              +  S++ L    LY T EPC MC   I    I  + +G +  +
Sbjct: 68  RASKKYSKDFLWGCTLYTTAEPCAMCTGTIYWGNIGTIVFGMTERR 113


>gi|317504450|ref|ZP_07962429.1| riboflavin biosynthesis protein RibD [Prevotella salivae DSM 15606]
 gi|315664438|gb|EFV04126.1| riboflavin biosynthesis protein RibD [Prevotella salivae DSM 15606]
          Length = 318

 Score =  106 bits (266), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 39/151 (25%), Positives = 56/151 (37%), Gaps = 19/151 (12%)

Query: 3   KGNVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +   +M   L+ A+N          VGAV V  N+II    +     +    HAE+ A  
Sbjct: 2   EHEYYMKRCLQLAENGRQNAKPNPMVGAVIVARNRIIGEGYHVRFGEE----HAEVNAF- 56

Query: 61  MGCRILSQE-ILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113
                   E +L E  +YV+LEPC        CA  I    I+R   G  +P       G
Sbjct: 57  -ASVKPEDEMLLNEATIYVSLEPCSHYGKTPPCADLIISKGIKRCVCGCVDPFAKVQGRG 115

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
            Q    A      E+  G+ E+    +   F
Sbjct: 116 IQRMRDAG----IEVIVGVMEKECLALNHRF 142


>gi|73666745|ref|YP_302761.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase /
           diaminohydroxyphosphoribosylaminopyrimidine deaminase
           [Ehrlichia canis str. Jake]
 gi|72393886|gb|AAZ68163.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase /
           diaminohydroxyphosphoribosylaminopyrimidine deaminase
           [Ehrlichia canis str. Jake]
          Length = 361

 Score =  106 bits (266), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 36/155 (23%), Positives = 60/155 (38%), Gaps = 25/155 (16%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56
           M     FMS AL  A+       +   P VG + V    I+ R   +         HAE+
Sbjct: 2   MHDDKKFMSLALRIARRGL--GNVFPNPAVGCIVVNRGIIVGRGWTQVGGR----PHAEV 55

Query: 57  LAIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGI 110
           +A+          +     +YVTLEPC+       CA  +  A I+R+   A +P     
Sbjct: 56  VALNNAG-----YLAKGATVYVTLEPCSHYGKTGPCALKLIDAGIKRMVIAARDPDVRVS 110

Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
            NG +    A      ++   +  + ++++   FF
Sbjct: 111 GNGIKLLRDAN----IDVKCDLMYKEAQELNVGFF 141


>gi|229180391|ref|ZP_04307734.1| RibD (Riboflavin-specific deaminase) [Bacillus cereus 172560W]
 gi|228603138|gb|EEK60616.1| RibD (Riboflavin-specific deaminase) [Bacillus cereus 172560W]
          Length = 379

 Score =  106 bits (266), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 35/158 (22%), Positives = 61/158 (38%), Gaps = 24/158 (15%)

Query: 3   KGNVFMSCALEEAQ-NAALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
               +M  AL  A+  +   +  P VGAV V +  I+    +     +    HAE+ A++
Sbjct: 11  TDQEYMRIALLLAEGTSGQTSPNPMVGAVVVKDGNIVGMGAHLRAGEE----HAEVHALQ 66

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           M  +        +  +YVTLEPC        C   +    ++R+     +       NG 
Sbjct: 67  MAGQ-----NAKDATVYVTLEPCSHFGKTPPCCELLIEKGVKRVVIATLDCNPLVSGNGK 121

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF---KERR 149
           +    A      E+  G+ E  +  + + FF   K +R
Sbjct: 122 RRLEEA----RIEVTTGVLEAEAVLLNRYFFHYMKTKR 155


>gi|2493562|sp|P70814|RIBD_BACAM RecName: Full=Riboflavin biosynthesis protein RibD; Includes:
           RecName:
           Full=Diaminohydroxyphosphoribosylaminopyrimidine
           deaminase; Short=DRAP deaminase; AltName:
           Full=Riboflavin-specific deaminase; Includes: RecName:
           Full=5-amino-6-(5-phosphoribosylamino)uracil reductase;
           AltName: Full=HTP reductase
 gi|1592688|emb|CAA65189.1| deaminase [Bacillus amyloliquefaciens]
          Length = 371

 Score =  106 bits (266), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 39/148 (26%), Positives = 62/148 (41%), Gaps = 21/148 (14%)

Query: 5   NVFMSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
             +M+ A+E A+    + +  P VGAV V   +I+    +         AHAE+ AI M 
Sbjct: 3   EYYMNTAIELARRGEGQTQPNPLVGAVVVKKRQIVGMGAHLQYGE----AHAEVHAINMA 58

Query: 63  CRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116
             +         DLYVTLEPC        CA  I  + I+R++    +P       G   
Sbjct: 59  GSLA-----KGADLYVTLEPCSHYGKTPPCAELIMKSGIKRVFIAVEDPNPLVAGKGITM 113

Query: 117 YTLATCHHSPEIYPGISEQRSRQIIQDF 144
              A      E+  G+  Q++ ++ + F
Sbjct: 114 LEEAG----IEVKTGLLRQQAEELNKMF 137


>gi|227364534|ref|ZP_03848595.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Lactobacillus reuteri MM2-3]
 gi|325682351|ref|ZP_08161868.1| riboflavin specific deaminase [Lactobacillus reuteri MM4-1A]
 gi|227070371|gb|EEI08733.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Lactobacillus reuteri MM2-3]
 gi|324978190|gb|EGC15140.1| riboflavin specific deaminase [Lactobacillus reuteri MM4-1A]
          Length = 355

 Score =  106 bits (266), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 41/153 (26%), Positives = 61/153 (39%), Gaps = 22/153 (14%)

Query: 3   KGNVFMSCALEEAQNAA-LRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +   FM  A+ EA  A     + P VGAV V N ++++R             HAE  AI 
Sbjct: 5   EDAYFMQMAIAEAAKAGNETWKNPRVGAVVVKNGQVLARGHTHEYGGI----HAERDAI- 59

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
                L+ +      LYVTLEPC        C+ AI  A IRR+    ++P       G 
Sbjct: 60  ---GKLTPKQGQGATLYVTLEPCNHYGKQPPCSQAIIDAGIRRVVIAETDPHKLVTGKGI 116

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQ--DFF 145
                        +  G+ ++ ++ +    DFF
Sbjct: 117 ATLQQQN----IIVKTGVLKEAAQALNPYYDFF 145


>gi|323178323|gb|EFZ63901.1| riboflavin biosynthesis protein RibD [Escherichia coli 1180]
          Length = 361

 Score =  106 bits (266), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 36/150 (24%), Positives = 56/150 (37%), Gaps = 21/150 (14%)

Query: 8   MSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M+ AL+ AQ      +  P VG V V + +I+    ++         HAE+ A+RM    
Sbjct: 1   MARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGE----PHAEVHALRMAGEK 56

Query: 66  LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
                      YVTLEPC        C  A+  A + R+     +P       G      
Sbjct: 57  A-----KGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVASMQDPNPQVAGRGLYRLQQ 111

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
           A      ++  G+    + Q+ + F K  R
Sbjct: 112 AG----IDVSHGLMMSEAEQLNKGFLKRMR 137


>gi|26522745|dbj|BAC44849.1| pyrimidine deaminase/pyrimidine reductase [Photobacterium
           phosphoreum]
          Length = 388

 Score =  106 bits (266), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 35/153 (22%), Positives = 58/153 (37%), Gaps = 21/153 (13%)

Query: 3   KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
                MS A+  A++        P VG V V +  I+    +   +      HAE+ A+R
Sbjct: 4   TDQQMMSRAIALAKHGCYTTAPNPNVGCVIVNDGDIVGEGYH--YQAGQP--HAEVFALR 59

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
                  Q+      +YVTLEPC        CA A+  A++ R+     +P       G 
Sbjct: 60  QA-----QQRAQGATVYVTLEPCSHYGRTPPCAEALINAKVARVVCAMVDPNPAVAGRGI 114

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
                A      E+  G+   +++ +   F K+
Sbjct: 115 ALLRAAG----IEVDVGVLASQAQALNPGFIKQ 143


>gi|328948002|ref|YP_004365339.1| riboflavin biosynthesis protein RibD [Treponema succinifaciens DSM
           2489]
 gi|328448326|gb|AEB14042.1| riboflavin biosynthesis protein RibD [Treponema succinifaciens DSM
           2489]
          Length = 390

 Score =  106 bits (266), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 36/150 (24%), Positives = 58/150 (38%), Gaps = 22/150 (14%)

Query: 6   VFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           +FM  A+E A+      ++   P VGAV   + KII+   +          HAE  A++ 
Sbjct: 17  IFMQRAIELAKRGG--GKVHPNPLVGAVIEKDGKIIAEGFHHEYGNL----HAERDALKN 70

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
                +       +LYVTLEPC        C  AI  A I+ +  G+ +P       G  
Sbjct: 71  AAEKNACVR--GANLYVTLEPCCHTGKQPPCTQAIIDAGIKNVVIGSRDPNSLVNGKGVA 128

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
                  +   +I+    +     + + FF
Sbjct: 129 QLE----NAGIKIFRDFMKAECDSLNEIFF 154


>gi|326941884|gb|AEA17780.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Bacillus
           thuringiensis serovar chinensis CT-43]
          Length = 370

 Score =  106 bits (266), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 35/158 (22%), Positives = 61/158 (38%), Gaps = 24/158 (15%)

Query: 3   KGNVFMSCALEEAQ-NAALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
               +M  AL  A+  +   +  P VGAV V +  I+    +     +    HAE+ A++
Sbjct: 2   TDQEYMRIALLLAEGTSGQTSPNPMVGAVVVKDGNIVGMGAHLRAGEE----HAEVHALQ 57

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           M  +        +  +YVTLEPC        C   +    ++R+     +       NG 
Sbjct: 58  MAGQ-----NAKDATVYVTLEPCSHFGKTPPCCELLIEKGVKRVVIATLDCNPLVSGNGK 112

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF---KERR 149
           +    A      E+  G+ E  +  + + FF   K +R
Sbjct: 113 RRLEEA----RIEVTTGVLEAEAVLLNRYFFHYMKTKR 146


>gi|257899304|ref|ZP_05678957.1| riboflavin specific deaminase [Enterococcus faecium Com15]
 gi|257837216|gb|EEV62290.1| riboflavin specific deaminase [Enterococcus faecium Com15]
          Length = 364

 Score =  106 bits (266), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 41/147 (27%), Positives = 60/147 (40%), Gaps = 23/147 (15%)

Query: 4   GNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
              FM  A+ EA+    +      P VGA  V   K+IS   + +       +HAE+ AI
Sbjct: 9   HQSFMLAAIAEAKKG--KGNTFTNPLVGAAIVKEGKLISLGAHLHYGE----SHAEVNAI 62

Query: 60  RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113
           +      S E L    LYVTLEPC        C  AI  + I  +  G  +P       G
Sbjct: 63  QNCS---SPEELFNSTLYVTLEPCNHQGKQPPCTQAIVQSGITTVVIGQLDPNPLVAGKG 119

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQI 140
            +F       H  ++  G+ E++ R +
Sbjct: 120 REFLQK----HGIKVIVGVEEEKCRAL 142


>gi|220912199|ref|YP_002487508.1| CMP/dCMP deaminase zinc-binding [Arthrobacter chlorophenolicus A6]
 gi|219859077|gb|ACL39419.1| CMP/dCMP deaminase zinc-binding [Arthrobacter chlorophenolicus A6]
          Length = 161

 Score =  106 bits (266), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 32/94 (34%), Positives = 46/94 (48%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           ++  A+  A +   R   P GAV V  +  +    NR     D TAHAE++AIR      
Sbjct: 13  YLQQAVGLATDNVDRGGGPFGAVVVTADGRVFEGVNRVTLDNDPTAHAEVVAIRAAAAGT 72

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
           +   L    LY + EPC +C A+   ARI R+Y+
Sbjct: 73  ANFNLQGAVLYASCEPCPLCLASALWARIDRVYF 106


>gi|49088842|gb|AAT51612.1| PA4056 [synthetic construct]
          Length = 374

 Score =  106 bits (266), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 35/152 (23%), Positives = 56/152 (36%), Gaps = 21/152 (13%)

Query: 4   GNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
             ++M+ ALE A+      +    VG V V + +++    +          HAE+ A+R 
Sbjct: 5   DPLYMARALELARQGLYSTQPNPRVGCVLVKDGQVVGEGWHVRAGE----PHAEVHALRQ 60

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
                  E       YVTLEPC        CA A+  A + R+     +P       G  
Sbjct: 61  AG-----ENARGATAYVTLEPCSHFGRTPPCADALVGAGVARVVAAMQDPNPEVAGRGLL 115

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
               A       +  G+ E  +R++   F K 
Sbjct: 116 RLMQAG----IAVQSGVLEAEARELNIGFIKR 143


>gi|330953126|gb|EGH53386.1| riboflavin biosynthesis protein RibD [Pseudomonas syringae Cit 7]
          Length = 378

 Score =  106 bits (266), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 35/152 (23%), Positives = 54/152 (35%), Gaps = 21/152 (13%)

Query: 4   GNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
              +M+ ALE A+           VG V V   +I+    +          HAE+ A+R 
Sbjct: 9   DVHYMARALELARKGLYSTHPNPRVGCVIVREGRIVGEGWHVRAGE----PHAEVHALRQ 64

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
              +           YVTLEPC        CA A+  A + R+     +P       G  
Sbjct: 65  AGELA-----RGATAYVTLEPCSHQGRTPPCADALIEAGVTRVVAAMQDPNPEVSGRGL- 118

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
              L   +    +  G+ E  +R + + F K 
Sbjct: 119 ---LRLMNAGIGVQCGVLESEARALNKGFLKR 147


>gi|193215778|ref|YP_001996977.1| riboflavin biosynthesis protein RibD [Chloroherpeton thalassium
           ATCC 35110]
 gi|193089255|gb|ACF14530.1| riboflavin biosynthesis protein RibD [Chloroherpeton thalassium
           ATCC 35110]
          Length = 368

 Score =  106 bits (266), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 39/153 (25%), Positives = 60/153 (39%), Gaps = 23/153 (15%)

Query: 2   KKGNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57
            +   ++   L+ A+  A    +   P VG+V V N KII    +          HAE+ 
Sbjct: 6   SEDEFYIDRCLKLAKKGA--GFVSPNPLVGSVIVHNGKIIGEGFHEVYGG----PHAEVN 59

Query: 58  AIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIE 111
           AI     +    +L E  LYV LEPC        CA  I   +I R+  G  +P      
Sbjct: 60  AI---GSVAQPILLQESTLYVNLEPCAHFGKTPPCADLIIRHKIPRVVIGCLDPFEHVSG 116

Query: 112 NGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
            G +    A      E+  G+ E  + ++ + F
Sbjct: 117 KGAEKLRHAG----VEVKVGVLESEALRLNEAF 145


>gi|329733229|gb|EGG69566.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp.
           aureus 21193]
          Length = 347

 Score =  106 bits (266), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 37/152 (24%), Positives = 62/152 (40%), Gaps = 24/152 (15%)

Query: 5   NVFMSCALEEAQNAALRNEI--PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
           + FM  A++ A     +  +  PVGAV V   +I+    +  +  K    HAE+ A+ M 
Sbjct: 2   SQFMDYAIQLANMVQGQTGVNPPVGAVVVKEGRIVGIGAHLRKGDK----HAEVQALDMA 57

Query: 63  CRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116
                Q+      +Y+TLEPC        C   I   +I ++ Y   +       N    
Sbjct: 58  -----QQNAEGATIYITLEPCSHFGSTPPCVNKIIDCKITKVVYATKD-------NSLDT 105

Query: 117 YTLATCHHSPEIYPGISEQRSRQIIQDFFKER 148
           +   T          + ++R+ Q+ QDFFK +
Sbjct: 106 HGDETLRAQGIEVECVDDERALQLYQDFFKAK 137


>gi|307137057|ref|ZP_07496413.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Escherichia coli H736]
          Length = 361

 Score =  106 bits (266), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 36/150 (24%), Positives = 56/150 (37%), Gaps = 21/150 (14%)

Query: 8   MSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M+ AL+ AQ      +  P VG V V + +I+    ++         HAE+ A+RM    
Sbjct: 1   MARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGE----PHAEVHALRMAGEK 56

Query: 66  LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
                      YVTLEPC        C  A+  A + R+     +P       G      
Sbjct: 57  A-----KGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVASMQDPNPQVAGRGLYRLQQ 111

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
           A      ++  G+    + Q+ + F K  R
Sbjct: 112 AG----IDVSHGLMMSEAEQLNKGFLKRMR 137


>gi|253732422|ref|ZP_04866587.1| riboflavin specific deaminase [Staphylococcus aureus subsp. aureus
           USA300_TCH959]
 gi|253723812|gb|EES92541.1| riboflavin specific deaminase [Staphylococcus aureus subsp. aureus
           USA300_TCH959]
          Length = 357

 Score =  106 bits (266), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 37/152 (24%), Positives = 62/152 (40%), Gaps = 24/152 (15%)

Query: 5   NVFMSCALEEAQNAALRNEI--PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
           + FM  A++ A     +  +  PVGAV V   +I+    +  +  K    HAE+ A+ M 
Sbjct: 12  SQFMDYAIQLANMVQGQTGVNPPVGAVVVKEGRIVGIGAHLRKGDK----HAEVQALDMA 67

Query: 63  CRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116
                Q+      +Y+TLEPC        C   I   +I ++ Y   +       N    
Sbjct: 68  -----QQNAEGATIYITLEPCSHFGSTPPCVNKIIDCKITKVVYATKD-------NSLDT 115

Query: 117 YTLATCHHSPEIYPGISEQRSRQIIQDFFKER 148
           +   T          + ++R+ Q+ QDFFK +
Sbjct: 116 HGDETLRAQGIEVECVDDERALQLYQDFFKAK 147


>gi|332992366|gb|AEF02421.1| riboflavin biosynthesis protein RibD [Alteromonas sp. SN2]
          Length = 404

 Score =  106 bits (266), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 40/153 (26%), Positives = 59/153 (38%), Gaps = 22/153 (14%)

Query: 4   GNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNK-IISRAGNRNRELKDVTAHAEILAIR 60
              +M+ A+  AQ      +  P VG V V NN   I +  +    ++  T HAEI A+R
Sbjct: 38  DYYWMAKAIRLAQKGQFTTSPNPRVGCVIVNNNNDSIGQGFH----VQAGTPHAEIHALR 93

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
              +            YVTLEPC        CA A+  A++ R+    ++P      NG 
Sbjct: 94  EAGKKA-----KGATAYVTLEPCSHYGRTPPCAEALIKAQVSRVVIAMTDPNPNVSGNGI 148

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
           +    A      E+   I    S  +   F K 
Sbjct: 149 RMLQDAG----IEVSSDIMSAESAALNPGFIKR 177


>gi|228941263|ref|ZP_04103816.1| RibD (Riboflavin-specific deaminase) [Bacillus thuringiensis
           serovar berliner ATCC 10792]
 gi|228974195|ref|ZP_04134765.1| RibD (Riboflavin-specific deaminase) [Bacillus thuringiensis
           serovar thuringiensis str. T01001]
 gi|228980786|ref|ZP_04141091.1| RibD (Riboflavin-specific deaminase) [Bacillus thuringiensis Bt407]
 gi|228778955|gb|EEM27217.1| RibD (Riboflavin-specific deaminase) [Bacillus thuringiensis Bt407]
 gi|228785535|gb|EEM33544.1| RibD (Riboflavin-specific deaminase) [Bacillus thuringiensis
           serovar thuringiensis str. T01001]
 gi|228818422|gb|EEM64494.1| RibD (Riboflavin-specific deaminase) [Bacillus thuringiensis
           serovar berliner ATCC 10792]
          Length = 379

 Score =  106 bits (266), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 35/158 (22%), Positives = 61/158 (38%), Gaps = 24/158 (15%)

Query: 3   KGNVFMSCALEEAQ-NAALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
               +M  AL  A+  +   +  P VGAV V +  I+    +     +    HAE+ A++
Sbjct: 11  TDQEYMRIALLLAEGTSGQTSPNPMVGAVVVKDGNIVGMGAHLRAGEE----HAEVHALQ 66

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           M  +        +  +YVTLEPC        C   +    ++R+     +       NG 
Sbjct: 67  MAGQ-----NAKDATVYVTLEPCSHFGKTPPCCELLIEKGVKRVVIATLDCNPLVSGNGK 121

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF---KERR 149
           +    A      E+  G+ E  +  + + FF   K +R
Sbjct: 122 RRLEEA----RIEVTTGVLEAEAVLLNRYFFHYMKTKR 155


>gi|218246081|ref|YP_002371452.1| riboflavin biosynthesis protein RibD [Cyanothece sp. PCC 8801]
 gi|218166559|gb|ACK65296.1| riboflavin biosynthesis protein RibD [Cyanothece sp. PCC 8801]
          Length = 360

 Score =  106 bits (266), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 37/149 (24%), Positives = 58/149 (38%), Gaps = 21/149 (14%)

Query: 4   GNVFMSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
               M   L+ A+ A  +    P VG+V V N +I+    +          HAEI A+R 
Sbjct: 7   DQQMMQRCLQLARQALGQTSPNPLVGSVIVQNGEIVGEGFHPKAGE----PHAEIFALRQ 62

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
                 QE      +YV+LEPC        C  A+  A + ++  G  +P       G +
Sbjct: 63  A-----QERAKGATVYVSLEPCNHYGRTPPCTDALIAAGVSKVVVGMVDPNPLVSGKGVE 117

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDF 144
               +      E+  G+ E   RQ+ + F
Sbjct: 118 KLQESG----IEVVVGVEESACRQLNEAF 142


>gi|297517703|ref|ZP_06936089.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Escherichia coli OP50]
          Length = 361

 Score =  106 bits (266), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 36/150 (24%), Positives = 56/150 (37%), Gaps = 21/150 (14%)

Query: 8   MSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M+ AL+ AQ      +  P VG V V + +I+    ++         HAE+ A+RM    
Sbjct: 1   MARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGE----PHAEVHALRMAGEK 56

Query: 66  LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
                      YVTLEPC        C  A+  A + R+     +P       G      
Sbjct: 57  A-----KGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVASMQDPNPQVAGRGLYRLQQ 111

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
           A      ++  G+    + Q+ + F K  R
Sbjct: 112 AG----IDVSHGLMMSEAEQLNKGFLKRMR 137


>gi|15602614|ref|NP_245686.1| hypothetical protein PM0749 [Pasteurella multocida subsp. multocida
           str. Pm70]
 gi|12721046|gb|AAK02833.1| RibD [Pasteurella multocida subsp. multocida str. Pm70]
          Length = 376

 Score =  106 bits (266), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 37/155 (23%), Positives = 59/155 (38%), Gaps = 21/155 (13%)

Query: 3   KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +  V+M  ALE A+         P VG V V +  I+ R  +         AHAE++A+R
Sbjct: 7   QDVVYMQMALELAEKGQFTTTPNPSVGCVLVKDGIIVGRGFHVKAGE----AHAEVMALR 62

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
                   E       YVTLEPC        CA  +  A + ++     +P       G 
Sbjct: 63  EAG-----ENARGATAYVTLEPCSHFGRTPPCAQGLIDAGVVKVVSAMCDPNPQVAGRGL 117

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
              + A    +     G+  +++  + + F K  R
Sbjct: 118 SMLSDAGIESAV----GLLAEKAEWLNRGFLKRMR 148


>gi|119715379|ref|YP_922344.1| guanine deaminase [Nocardioides sp. JS614]
 gi|119536040|gb|ABL80657.1| Guanine deaminase [Nocardioides sp. JS614]
          Length = 158

 Score =  106 bits (266), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 37/133 (27%), Positives = 51/133 (38%), Gaps = 4/133 (3%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
               +++ A+  AQ        P GAV V     +    NR     D TAHAE+ AIR  
Sbjct: 5   TDEQWLARAVRLAQENVAAGGGPFGAVVVGAGVRVGEGQNRVTRDLDPTAHAEVTAIRQA 64

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS--NPKGGGIENG--TQFYT 118
           C  L    L    LY + EPC +C  A   AR+ R+ Y A   +   GG ++        
Sbjct: 65  CAALGDFSLTGCVLYASCEPCPLCLTASLWARLDRVVYAADRHDAARGGFDDREFYDLLG 124

Query: 119 LATCHHSPEIYPG 131
                    +  G
Sbjct: 125 RDRATWPTRVEQG 137


>gi|46201728|ref|ZP_00208227.1| COG1985: Pyrimidine reductase, riboflavin biosynthesis
           [Magnetospirillum magnetotacticum MS-1]
          Length = 358

 Score =  106 bits (266), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 34/148 (22%), Positives = 53/148 (35%), Gaps = 25/148 (16%)

Query: 8   MSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
           M  AL  A+       +   P VG V V + +++ R   +         HAE  A+ M  
Sbjct: 1   MRAALALARRGL--GTVWPNPAVGCVIVRDGRVVGRGWTQPGGR----PHAETEALAMAG 54

Query: 64  RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFY 117
           R           +YVTLEPC        CA A+  A + R+     +P       G    
Sbjct: 55  RAA-----NGATVYVTLEPCAHHGKTAPCADALIAAGVSRVVVAVQDPDSRVAGKGIDRL 109

Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDFF 145
            +A       +  G+    + ++   FF
Sbjct: 110 RVAGIP----VTEGVLHAEASELNAGFF 133


>gi|113868680|ref|YP_727169.1| cytosine/adenosine deaminase [Ralstonia eutropha H16]
 gi|113527456|emb|CAJ93801.1| Cytosine/adenosine deaminase [Ralstonia eutropha H16]
          Length = 169

 Score =  106 bits (265), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 38/154 (24%), Positives = 58/154 (37%), Gaps = 11/154 (7%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRE-LKDVTAHAEILAIRM 61
               +  ++  +  +  R   P  A+       II+ AGN +     D T HAE++A   
Sbjct: 16  DLELLRQSIALSDASRARGRHPFAALVADQAGNIIASAGNNSMPPEGDPTQHAELVAAAQ 75

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIE---------N 112
             R L  E L +  LY + EPC MCA AI    I R+ Y  S  K  G+          +
Sbjct: 76  AARALPPEQLADCTLYTSAEPCCMCAGAIYWTGIGRVVYALSEHKLLGLTGDHPENPTLS 135

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
                  A      ++   + E  +      F+K
Sbjct: 136 LPCREVFARGQRQVDVVGPVLEDEAAAPHAGFWK 169


>gi|313902290|ref|ZP_07835695.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase
           ;5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Thermaerobacter subterraneus DSM 13965]
 gi|313467441|gb|EFR62950.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase
           ;5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Thermaerobacter subterraneus DSM 13965]
          Length = 443

 Score =  106 bits (265), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 39/152 (25%), Positives = 59/152 (38%), Gaps = 23/152 (15%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           +    FM  AL+ A  A  R   P   VGAV V +  ++    +R         HAE+ A
Sbjct: 38  EADRHFMRRALDLAARAGGRT-HPNPMVGAVIVRDGVVVGEGYHRRAGE----PHAEVEA 92

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
           +R       ++      LYVTLEPC        C  AI  A +RR+     +P       
Sbjct: 93  LRSA-----RDQARGATLYVTLEPCCHHGRTPPCTEAILAAGLRRVVVAMVDPDPRVAGR 147

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
           G      A      E+  G+   R+ ++ + +
Sbjct: 148 GLSVLAQAG----VEVAVGVEADRALRLNEAY 175


>gi|169634649|ref|YP_001708385.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Acinetobacter baumannii SDF]
 gi|169153441|emb|CAP02583.1| bifunctional protein [Includes:
           diaminohydroxyphosphoribosylaminopyrimidine deaminase
           (Riboflavin-specific deaminase);
           5-amino-6-(5-phosphoribosylamino)uracil reductase (HTP
           reductase) ] [Acinetobacter baumannii]
          Length = 361

 Score =  106 bits (265), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 39/155 (25%), Positives = 61/155 (39%), Gaps = 21/155 (13%)

Query: 1   MKKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           +K+   +M  A+E A+         P VG V V +N++I    +          HAE+ A
Sbjct: 4   LKQDQYWMQQAIELAKRGLYSTKPNPNVGCVIVKDNQVIGEGFHPRAGQ----PHAEVFA 59

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
           +R                YVTLEPC        CA A+  A+++++     +P       
Sbjct: 60  LRQAGEQAQ-----GATAYVTLEPCAHYGRTPPCAEALVKAQVKKVVVACPDPNPLVAGK 114

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
           G Q       +   E+  GI E  + Q+ Q F K 
Sbjct: 115 GVQILK----NAGIEVEIGICEDLAAQLNQGFLKA 145


>gi|261341007|ref|ZP_05968865.1| riboflavin biosynthesis protein RibD [Enterobacter cancerogenus
           ATCC 35316]
 gi|288316872|gb|EFC55810.1| riboflavin biosynthesis protein RibD [Enterobacter cancerogenus
           ATCC 35316]
          Length = 367

 Score =  106 bits (265), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 34/155 (21%), Positives = 57/155 (36%), Gaps = 21/155 (13%)

Query: 3   KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +  ++M+ A++ AQ      +  P VG V V + +I+    +          HAE+ A+R
Sbjct: 2   QDEIYMARAMKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGFHYRAGE----PHAEVHALR 57

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           M               YVTLEPC        C  A+  A + R+     +P       G 
Sbjct: 58  MAGEKA-----RGATAYVTLEPCSHHGRTPPCCEALIAAGVSRVVASMQDPNPQVAGRGL 112

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
                       ++  G+  Q +  + + F K  R
Sbjct: 113 YRLQQEG----IDVSHGLMMQDAEALNKGFLKRMR 143


>gi|328956808|ref|YP_004374194.1| fused diaminohydroxyphosphoribosylaminopyrimidine deaminase;
           5-amino-6-(5-phosphoribosylamino) uracil reductase
           [Carnobacterium sp. 17-4]
 gi|328673132|gb|AEB29178.1| fused diaminohydroxyphosphoribosylaminopyrimidine deaminase;
           5-amino-6-(5-phosphoribosylamino) uracil reductase
           [Carnobacterium sp. 17-4]
          Length = 355

 Score =  106 bits (265), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 35/146 (23%), Positives = 58/146 (39%), Gaps = 23/146 (15%)

Query: 10  CALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
            AL+ A+        P   VGAV V   ++I +  ++         HAE+ AI    +  
Sbjct: 1   MALDLARKG-KGWTTPNPLVGAVIVKGGRVIGQGYHQKYGQ----PHAEVNAIVSAKK-- 53

Query: 67  SQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
               +    LYVTLEPC        C+  +    I+R+  G  +P       G +     
Sbjct: 54  ---DVTGATLYVTLEPCSHFGKTPPCSDLLIDKNIKRVVVGTLDPNPLVAGKGIERLRSN 110

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFK 146
                 E+  G+ E+ S+++ + F K
Sbjct: 111 G----IEVVTGVLEEESQKLNEIFIK 132


>gi|320540315|ref|ZP_08039967.1| fused diaminohydroxyphosphoribosylaminopyrimidine deaminase and
           5-amino-6-(5-phosphoribosylamino) uracil reductase
           [Serratia symbiotica str. Tucson]
 gi|320029635|gb|EFW11662.1| fused diaminohydroxyphosphoribosylaminopyrimidine deaminase and
           5-amino-6-(5-phosphoribosylamino) uracil reductase
           [Serratia symbiotica str. Tucson]
          Length = 371

 Score =  106 bits (265), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 35/157 (22%), Positives = 54/157 (34%), Gaps = 21/157 (13%)

Query: 1   MKKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           M+    +M+ A + A+         P VG V V + +I+    +          HAE+ A
Sbjct: 1   MQSDVFYMARAFKLARLGRFTTAPNPNVGCVIVRDGEIVGEGYHLRAGE----PHAEVHA 56

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
           + M               YVTLEPC        CA A+  A + R+     +P       
Sbjct: 57  LCMAGEKA-----RGATAYVTLEPCSHHGRTPPCADALVAAGVSRVVTAMQDPNPQVAGR 111

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
           G      A      E+  G+    +  +   F K  R
Sbjct: 112 GLYQLQQAG----IEVCHGLMLAEAEAVNPGFLKRMR 144


>gi|271965977|ref|YP_003340173.1| cytosine/adenosine deaminase [Streptosporangium roseum DSM 43021]
 gi|270509152|gb|ACZ87430.1| cytosine/adenosine deaminase [Streptosporangium roseum DSM 43021]
          Length = 141

 Score =  106 bits (265), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 28/102 (27%), Positives = 45/102 (44%), Gaps = 1/102 (0%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRM 61
               F+  A+E A  A    + P G++    +  +I+   N      D+TAH E+   R 
Sbjct: 4   DDERFLRRAIELAGTARAAGDPPFGSLLTGPDGSVIAEDRNTVLTDSDITAHPELKLARW 63

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
             R L  E      +Y + +PC MCA AI  + + R+ +  S
Sbjct: 64  AARELDPETAAATTMYTSCQPCGMCAGAIERSGLGRVVFALS 105


>gi|332976011|gb|EGK12882.1| riboflavin biosynthesis protein RibD [Psychrobacter sp. 1501(2011)]
          Length = 374

 Score =  106 bits (265), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 37/155 (23%), Positives = 62/155 (40%), Gaps = 21/155 (13%)

Query: 3   KGNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +   +M+ A+E A+      R    VG V V +  II    +     K    HAE+ A+R
Sbjct: 35  EDYYYMNLAIEAAKKGLYTTRPNPAVGCVLVKDGLIIGTGFH----PKAGQPHAEVFALR 90

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
              + ++         YVTLEPC        CA A+  A++ R+     +P       G 
Sbjct: 91  NATQSVAA-----ATAYVTLEPCSHTGKTPPCAEALIKAQVSRVVIAGLDPNPKVAGRGV 145

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
           +    A      ++  G+  +++ Q+   F K  R
Sbjct: 146 RLLLDAG----IKVSVGVCTEQAEQLNLGFLKSMR 176


>gi|196047192|ref|ZP_03114408.1| riboflavin biosynthesis protein RibD [Bacillus cereus 03BB108]
 gi|225866095|ref|YP_002751473.1| riboflavin biosynthesis protein RibD [Bacillus cereus 03BB102]
 gi|196021941|gb|EDX60632.1| riboflavin biosynthesis protein RibD [Bacillus cereus 03BB108]
 gi|225786227|gb|ACO26444.1| riboflavin biosynthesis protein RibD [Bacillus cereus 03BB102]
          Length = 370

 Score =  106 bits (265), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 36/158 (22%), Positives = 58/158 (36%), Gaps = 24/158 (15%)

Query: 3   KGNVFMSCALEEAQ-NAALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
               +M  AL+ A+  +   +  P VGAV V +  I+    +     +    HAE+ A+ 
Sbjct: 2   TDQEYMRIALQLAEGTSGQTSPNPMVGAVVVKDGNIVGMGAHLRAGEE----HAEVHALH 57

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           M              +YVTLEPC        C   +    I R+     +       NG 
Sbjct: 58  MAGDKA-----KGATVYVTLEPCSHFGKTPPCCDLLIKKGITRVVIATLDCNPLVSGNGK 112

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF---KERR 149
           +    A      E+  G+ E  +  + + FF   K +R
Sbjct: 113 RKLEEAG----IEVTTGVLEAEAVLLNRYFFHYMKTKR 146


>gi|163750014|ref|ZP_02157258.1| riboflavin biosynthesis protein RibD [Shewanella benthica KT99]
 gi|161330288|gb|EDQ01269.1| riboflavin biosynthesis protein RibD [Shewanella benthica KT99]
          Length = 380

 Score =  106 bits (265), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 38/154 (24%), Positives = 56/154 (36%), Gaps = 17/154 (11%)

Query: 3   KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +   FMS A++ A+         P VG V  L+++I+    +          HAE+ A+ 
Sbjct: 5   EDTEFMSRAIKLARRGLYTTRPNPCVGCVITLDDQILGEGFHIRAGG----PHAEVHALA 60

Query: 61  MGC-RILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113
           M   R      L     YVTLEPC        CA A+    I R+     +P       G
Sbjct: 61  MATQRADGLADLKGATAYVTLEPCSHYGRTPPCAEALIKHGISRVVVAVEDPNPRVSGRG 120

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
                 A      ++  G+    + QI   F K 
Sbjct: 121 INMLKDAG----IKVDVGLLGDEAAQINPGFMKR 150


>gi|15599251|ref|NP_252745.1| riboflavin-specific deaminase/reductase [Pseudomonas aeruginosa
           PAO1]
 gi|9950253|gb|AAG07443.1|AE004822_3 riboflavin-specific deaminase/reductase [Pseudomonas aeruginosa
           PAO1]
          Length = 373

 Score =  106 bits (265), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 35/152 (23%), Positives = 56/152 (36%), Gaps = 21/152 (13%)

Query: 4   GNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
             ++M+ ALE A+      +    VG V V + +++    +          HAE+ A+R 
Sbjct: 5   DPLYMARALELARQGLYSTQPNPRVGCVLVKDGQVVGEGWHVRAGE----PHAEVHALRQ 60

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
                  E       YVTLEPC        CA A+  A + R+     +P       G  
Sbjct: 61  AG-----ENARGATAYVTLEPCSHFGRTPPCADALVGAGVARVVAAMQDPNPEVAGRGLL 115

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
               A       +  G+ E  +R++   F K 
Sbjct: 116 RLMQAG----IAVQSGVLEAEARELNIGFIKR 143


>gi|330969741|gb|EGH69807.1| riboflavin biosynthesis protein RibD [Pseudomonas syringae pv.
           aceris str. M302273PT]
          Length = 378

 Score =  106 bits (265), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 35/152 (23%), Positives = 54/152 (35%), Gaps = 21/152 (13%)

Query: 4   GNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
              +M+ ALE A+           VG V V   +I+    +          HAE+ A+R 
Sbjct: 9   DVHYMARALELARKGLYSTHPNPRVGCVIVREGRIVGEGWHARAGE----PHAEVHALRQ 64

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
              +           YVTLEPC        CA A+  A + R+     +P       G  
Sbjct: 65  AGELA-----RGATAYVTLEPCSHQGRTPPCADALIEAGLTRVVAAMQDPNPEVSGRGL- 118

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
              L   +    +  G+ E  +R + + F K 
Sbjct: 119 ---LRLMNAGIGVQCGVLESEARALNKGFLKR 147


>gi|330888055|gb|EGH20716.1| riboflavin biosynthesis protein RibD [Pseudomonas syringae pv. mori
           str. 301020]
          Length = 276

 Score =  106 bits (265), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 37/152 (24%), Positives = 57/152 (37%), Gaps = 21/152 (13%)

Query: 4   GNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
              +M+ ALE A+N          VG V V + +I+    +          HAE+ A+R 
Sbjct: 9   DVHYMARALELARNGLYSTHPNPRVGCVIVRDGQIVGEGWHVRAGE----PHAEVHALRQ 64

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
                  E+      YVTLEPC        CA A+  A + R+     +P       G  
Sbjct: 65  A-----SELARGATAYVTLEPCSHQGRTPPCADALVNAGLARVVAAMQDPNPEVSGRGL- 118

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
              L   +    +  G+ E  +R + + F K 
Sbjct: 119 ---LRLMNAGIGVQCGVLESEARALNKGFLKR 147


>gi|257059130|ref|YP_003137018.1| riboflavin biosynthesis protein RibD [Cyanothece sp. PCC 8802]
 gi|256589296|gb|ACV00183.1| riboflavin biosynthesis protein RibD [Cyanothece sp. PCC 8802]
          Length = 360

 Score =  106 bits (265), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 37/149 (24%), Positives = 58/149 (38%), Gaps = 21/149 (14%)

Query: 4   GNVFMSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
               M   L+ A+ A  +    P VG+V V N +I+    +          HAEI A+R 
Sbjct: 7   DQQMMQRCLQLARQALGQTSPNPLVGSVIVQNGEIVGEGFHPKAGE----PHAEIFALRQ 62

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
                 QE      +YV+LEPC        C  A+  A + ++  G  +P       G +
Sbjct: 63  A-----QERAKGATVYVSLEPCNHYGRTPPCTDALIAAGVSKVVVGMVDPNPLVSGKGVE 117

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDF 144
               +      E+  G+ E   RQ+ + F
Sbjct: 118 KLQESG----IEVVVGVEESACRQLNEAF 142


>gi|260662243|ref|ZP_05863139.1| riboflavin biosynthesis protein RibD [Lactobacillus fermentum
           28-3-CHN]
 gi|260553626|gb|EEX26518.1| riboflavin biosynthesis protein RibD [Lactobacillus fermentum
           28-3-CHN]
          Length = 352

 Score =  106 bits (265), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 37/153 (24%), Positives = 59/153 (38%), Gaps = 20/153 (13%)

Query: 1   MKKGNVFMSCALEEAQNAA-LRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           M     FM  AL EA        + P VGAV V + ++++   +         AHAE  A
Sbjct: 1   MSSDEQFMQLALAEAAKGGSATWKNPQVGAVIVKDGQLLATGYHHQYGQ----AHAERDA 56

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
           I      LS E L    +YVTLEPC        C+  +  +   R+     +P       
Sbjct: 57  I----SKLSNEQLAGATIYVTLEPCFHYGKQPPCSQLLIDSHFARVVVATIDPHQVVGGK 112

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
           G      A      ++  G+ + ++  + + +F
Sbjct: 113 GIAQLKAAG----IDVEVGLLKDQAEALNRHYF 141


>gi|330812014|ref|YP_004356476.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase; riboflavin
           biosynthesis protein RibD [Pseudomonas brassicacearum
           subsp. brassicacearum NFM421]
 gi|327380122|gb|AEA71472.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase; riboflavin
           biosynthesis protein RibD [Pseudomonas brassicacearum
           subsp. brassicacearum NFM421]
          Length = 377

 Score =  106 bits (265), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 38/152 (25%), Positives = 57/152 (37%), Gaps = 21/152 (13%)

Query: 4   GNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
              +M+ ALE A+      +  P VG V V + +I+    +          HAE+ A+R 
Sbjct: 11  DAHYMARALELARRGHYTTHPNPRVGCVIVRDGQIVGEGWHIRAGE----PHAEVHALRA 66

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
                  E       YVTLEPC        CA A+  A + R+     +P       G Q
Sbjct: 67  AG-----EQARGATAYVTLEPCSHHGRTPPCADALVNAGVARVVAAMQDPNPEVAGRGLQ 121

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
               A          G+ E  +R++ + F K 
Sbjct: 122 RLAQAG----IATESGVLEGEARKLNEGFLKR 149


>gi|229146686|ref|ZP_04275053.1| RibD (Riboflavin-specific deaminase) [Bacillus cereus BDRD-ST24]
 gi|228636856|gb|EEK93319.1| RibD (Riboflavin-specific deaminase) [Bacillus cereus BDRD-ST24]
          Length = 379

 Score =  106 bits (265), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 35/158 (22%), Positives = 59/158 (37%), Gaps = 24/158 (15%)

Query: 3   KGNVFMSCALEEAQ-NAALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
               +M  AL+ A+  +   +  P VGAV V +  I+    +     +    HAE+ A+ 
Sbjct: 11  TDQEYMRIALQLAEGTSGQTSPNPMVGAVVVKDGNIVGMGAHLRAGEE----HAEVHALH 66

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           M              +YVTLEPC        C   +    ++R+     +       NG 
Sbjct: 67  MAGEKA-----KGATVYVTLEPCSHFGKTPPCCDLLLKKGVKRVVIATLDCNPLVSGNGK 121

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF---KERR 149
           +    A      E+  G+ E  +  + + FF   K +R
Sbjct: 122 RRLEEAG----IEVTTGVLEAEAVLLNRYFFHYMKTKR 155


>gi|260588249|ref|ZP_05854162.1| riboflavin biosynthesis protein RibD [Blautia hansenii DSM 20583]
 gi|260541387|gb|EEX21956.1| riboflavin biosynthesis protein RibD [Blautia hansenii DSM 20583]
          Length = 362

 Score =  106 bits (265), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 38/146 (26%), Positives = 54/146 (36%), Gaps = 21/146 (14%)

Query: 8   MSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M  AL+ A+           VGAV V   +II +  +         AHAE  A+   C  
Sbjct: 1   MKIALQLAKKGCGFTSPNPMVGAVIVKEGRIIGQGWHEKYGE----AHAERNAL-AAC-- 53

Query: 66  LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
              E      +YVTLEPC        C  AI  A I R+  G+ +P       G Q    
Sbjct: 54  --TENPKGATMYVTLEPCCHYGKQPPCINAIMEAGIERVVIGSGDPNPLVSGKGIQILKK 111

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFF 145
                   +   I ++   ++ + FF
Sbjct: 112 QGIL----VTEHILQEDCERLNEVFF 133


>gi|118479310|ref|YP_896461.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase /
           diaminohydroxyphosphoribosylaminopyrimidine deaminase
           [Bacillus thuringiensis str. Al Hakam]
 gi|229186356|ref|ZP_04313521.1| RibD (Riboflavin-specific deaminase) [Bacillus cereus BGSC 6E1]
 gi|118418535|gb|ABK86954.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase /
           diaminohydroxyphosphoribosylaminopyrimidine deaminase
           [Bacillus thuringiensis str. Al Hakam]
 gi|228597150|gb|EEK54805.1| RibD (Riboflavin-specific deaminase) [Bacillus cereus BGSC 6E1]
          Length = 379

 Score =  106 bits (265), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 36/158 (22%), Positives = 58/158 (36%), Gaps = 24/158 (15%)

Query: 3   KGNVFMSCALEEAQ-NAALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
               +M  AL+ A+  +   +  P VGAV V +  I+    +     +    HAE+ A+ 
Sbjct: 11  TDQEYMRIALQLAEGTSGQTSPNPMVGAVVVKDGNIVGMGAHLRAGEE----HAEVHALH 66

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           M              +YVTLEPC        C   +    I R+     +       NG 
Sbjct: 67  MAGDKA-----KGATVYVTLEPCSHFGKTPPCCDLLIKKGITRVVIATLDCNPLVSGNGK 121

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF---KERR 149
           +    A      E+  G+ E  +  + + FF   K +R
Sbjct: 122 RKLEEAG----IEVTTGVLEAEAVLLNRYFFHYMKTKR 155


>gi|163941852|ref|YP_001646736.1| riboflavin biosynthesis protein RibD [Bacillus weihenstephanensis
           KBAB4]
 gi|163864049|gb|ABY45108.1| riboflavin biosynthesis protein RibD [Bacillus weihenstephanensis
           KBAB4]
          Length = 370

 Score =  106 bits (265), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 37/158 (23%), Positives = 61/158 (38%), Gaps = 24/158 (15%)

Query: 3   KGNVFMSCALEEAQ-NAALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
               +M  AL+ AQ  +   +  P VGAV V + KI+    +     +    HAE+ A+ 
Sbjct: 2   TDQEYMRIALQLAQGTSGQTSPNPMVGAVVVKDGKIVGMGAHMRAGEE----HAEVHALH 57

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           M       E   +  +YVTLEPC        C   +    ++R+     +       NG 
Sbjct: 58  MAG-----ERAKDATVYVTLEPCSHFGKTPPCCELLIEKGVQRVVIATLDCNPLVSGNGK 112

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF---KERR 149
           +           E+  G+ E  +  + + FF   K +R
Sbjct: 113 RRLEEVG----IEVTTGVLEAEATLLNRYFFHYMKTKR 146


>gi|225387920|ref|ZP_03757684.1| hypothetical protein CLOSTASPAR_01690 [Clostridium asparagiforme
           DSM 15981]
 gi|225045989|gb|EEG56235.1| hypothetical protein CLOSTASPAR_01690 [Clostridium asparagiforme
           DSM 15981]
          Length = 161

 Score =  106 bits (265), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 31/99 (31%), Positives = 44/99 (44%), Gaps = 1/99 (1%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +   +E ++ +      P GA+       I+    N     K  T HAE  A     ++ 
Sbjct: 10  LKRCVEISRQSRANGNTPFGALLADKEGNILLEQPNVEITEKKCTGHAETQAAERASQLY 69

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNP 105
           S+E L +  LY T EPC MCA AI  A I R+ YG +  
Sbjct: 70  SREFLKDCTLYTTAEPCAMCAGAIYWAGIGRVVYGMTEK 108


>gi|150026064|ref|YP_001296890.1| riboflavin biosynthesis protein RibD [Flavobacterium psychrophilum
           JIP02/86]
 gi|149772605|emb|CAL44088.1| Riboflavin biosynthesis protein RibD [Flavobacterium psychrophilum
           JIP02/86]
          Length = 335

 Score =  106 bits (265), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 40/161 (24%), Positives = 65/161 (40%), Gaps = 24/161 (14%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57
           MK    ++   +E A+N      +P   VGAV V  NKII               HAE+ 
Sbjct: 1   MKIHEKYIKRCIELAKNGLPAA-MPNPSVGAVIVFENKIIGEGYTAAYGGN----HAEVN 55

Query: 58  AIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIE 111
           AI     + ++++L +  +YV+LEPC        C   I   +I  +  G  +       
Sbjct: 56  AI---LSVKNKDLLAKSTIYVSLEPCSHFGKTPPCCDLIIKYKIPNVVIGTVDSNSKVSG 112

Query: 112 NGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF---KERR 149
            G +    A  +    +  GI E   R+  + FF   +++R
Sbjct: 113 QGIKKLIEAGAN----VIVGILEAECRESNKRFFTFHEKKR 149


>gi|157073959|ref|NP_001096831.1| tRNA-specific adenosine deaminase-like protein 3 [Rattus
           norvegicus]
 gi|81882326|sp|Q561R2|ADAT3_RAT RecName: Full=tRNA-specific adenosine deaminase-like protein 3;
           AltName: Full=tRNA-specific adenosine-34 deaminase
           subunit ADAT3
 gi|62531223|gb|AAH93394.1| Adat3 protein [Rattus norvegicus]
 gi|149034525|gb|EDL89262.1| secretory carrier membrane protein 4, isoform CRA_e [Rattus
           norvegicus]
          Length = 349

 Score =  106 bits (265), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 41/153 (26%), Positives = 65/153 (42%), Gaps = 40/153 (26%)

Query: 26  VGAVAVLN--NKIISRAGNRNRELKDVTAHAEILAIRM----------------GC---- 63
           VGAV V    + +++   +   E      HA ++ I +                 C    
Sbjct: 195 VGAVVVDPASDHVLATGHDCCSEA-SPLLHAVMVCIDLVAQGQGRGSCDLRRHPACSFTQ 253

Query: 64  ------------RILSQEILP----EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKG 107
                       R L ++ LP      DLYVT EPC MCA A+  ARI+R++YGA +P  
Sbjct: 254 ATATQSARAGSVRKLDEDSLPYVCTGYDLYVTREPCVMCAMALVHARIQRVFYGAPSPD- 312

Query: 108 GGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140
           G +    + +     +H  +++ GI E + RQ+
Sbjct: 313 GALGTRFRVHARPDLNHRFQVFRGILEDQCRQL 345


>gi|302189350|ref|ZP_07266023.1| riboflavin biosynthesis protein RibD [Pseudomonas syringae pv.
           syringae 642]
          Length = 378

 Score =  106 bits (265), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 35/152 (23%), Positives = 54/152 (35%), Gaps = 21/152 (13%)

Query: 4   GNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
              +M+ A+E A+           VG V V   +I+    +          HAE+ A+R 
Sbjct: 9   DVHYMARAIELARKGLYSTHPNPRVGCVIVREGRIVGEGWHARAGE----PHAEVHALRQ 64

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
              +           YVTLEPC        CA A+  A + R+     +P       G  
Sbjct: 65  AGELA-----RGATAYVTLEPCSHQGRTPPCADALIEAGLTRVVAAMQDPNPEVSGRGL- 118

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
              L   +    +  G+ E  SR + + F K 
Sbjct: 119 ---LRLMNAGIGVQCGVLESESRALNKGFLKR 147


>gi|116669457|ref|YP_830390.1| cytosine deaminase [Arthrobacter sp. FB24]
 gi|116609566|gb|ABK02290.1| Cytosine deaminase [Arthrobacter sp. FB24]
          Length = 176

 Score =  106 bits (265), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 32/129 (24%), Positives = 50/129 (38%), Gaps = 14/129 (10%)

Query: 17  NAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDL 76
            +     IP+GA     N++I+   N   +  D  AH E+ A+R   R   Q+   +  L
Sbjct: 35  QSLSEGGIPIGAALARGNELIASGHNERVQHGDPIAHGEMAALRAAGR---QKSYRDTTL 91

Query: 77  YVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQ- 135
           Y TL PC MC   I   +I R+  G +    G  E               E+   + +  
Sbjct: 92  YTTLAPCAMCTGTIIQFKIPRVVVGEARTFPGEFE----LLRSRG----VEVL--VLDDQ 141

Query: 136 RSRQIIQDF 144
           R   ++  F
Sbjct: 142 RCVDMMLTF 150


>gi|317492964|ref|ZP_07951388.1| riboflavin biosynthesis protein RibD [Enterobacteriaceae bacterium
           9_2_54FAA]
 gi|316919086|gb|EFV40421.1| riboflavin biosynthesis protein RibD [Enterobacteriaceae bacterium
           9_2_54FAA]
          Length = 373

 Score =  106 bits (265), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 36/154 (23%), Positives = 55/154 (35%), Gaps = 21/154 (13%)

Query: 4   GNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
              +M+ A E A+         P VG V VLN++I+    +          HAE+ A+ M
Sbjct: 8   DEFYMARAFELARRGRFTTTPNPNVGCVIVLNDEIVGEGYHLRAGE----PHAEVHALHM 63

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
                          YVTLEPC        CA A+  A + R+     +P       G  
Sbjct: 64  AGDKA-----RGATAYVTLEPCSHHGRTPPCADALVAAGVSRVVAAMQDPNPNVAGRGLF 118

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
               A      ++  G+    +  + + F K  R
Sbjct: 119 KLQQAG----IDVSHGLMMNEAEAVNRGFLKRMR 148


>gi|251792829|ref|YP_003007555.1| riboflavin biosynthesis protein RibD [Aggregatibacter aphrophilus
           NJ8700]
 gi|247534222|gb|ACS97468.1| riboflavin biosynthesis protein RibD [Aggregatibacter aphrophilus
           NJ8700]
          Length = 374

 Score =  106 bits (265), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 37/155 (23%), Positives = 57/155 (36%), Gaps = 21/155 (13%)

Query: 3   KGNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           K   FM  AL+ A+           VG V V N +II +  +          HAE++A+R
Sbjct: 8   KDAEFMQLALDLAKQGEFTATPNPAVGCVLVKNGQIIGKGFHAKAGE----PHAEVMALR 63

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
                   E       YVTLEPC        CA  +  A +R +     +P       G 
Sbjct: 64  EAG-----ENARGATAYVTLEPCAHYGRTPPCAKGLVDAGVRIVIAAMCDPNPLVAGKGL 118

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
                A    +     G+ ++ + ++ + F K  R
Sbjct: 119 GILADAGIESAV----GLLKENAEELNKGFLKRMR 149


>gi|284989444|ref|YP_003407998.1| cytosine deaminase [Geodermatophilus obscurus DSM 43160]
 gi|284062689|gb|ADB73627.1| Cytosine deaminase [Geodermatophilus obscurus DSM 43160]
          Length = 165

 Score =  106 bits (265), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 27/100 (27%), Positives = 44/100 (44%), Gaps = 1/100 (1%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           ++    +  A+E+A+       +P+GA  V  +++++   NR  ++     H E   I  
Sbjct: 17  ERDRFLLGLAVEQARIGWEEGGVPIGAALVDGDRVLAVGRNRRVQMASAIRHGETDCIER 76

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
             R L   +     LY TL PC MCA    L  I R+  G
Sbjct: 77  AGR-LPASVYRRSVLYTTLSPCLMCAGTALLYDIPRIVVG 115


>gi|116052093|ref|YP_789063.1| riboflavin-specific deaminase/reductase [Pseudomonas aeruginosa
           UCBPP-PA14]
 gi|115587314|gb|ABJ13329.1| riboflavin-specific deaminase/reductase [Pseudomonas aeruginosa
           UCBPP-PA14]
          Length = 373

 Score =  106 bits (265), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 35/152 (23%), Positives = 55/152 (36%), Gaps = 21/152 (13%)

Query: 4   GNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
             ++M+ ALE A+           VG V V + +++    +          HAE+ A+R 
Sbjct: 5   DPLYMARALELARQGLYSTHPNPRVGCVLVKDGQVVGEGWHVRAGE----PHAEVHALRQ 60

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
                  E       YVTLEPC        CA A+  A + R+     +P       G  
Sbjct: 61  AG-----ENARGATAYVTLEPCSHFGRTPPCADALVGAGVARVVAAMQDPNPEVAGRGLL 115

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
               A       +  G+ E  +R++   F K 
Sbjct: 116 RLMQAG----IAVQSGVLEAEARELNIGFIKR 143


>gi|251811149|ref|ZP_04825622.1| possible diaminohydroxyphosphoribosylaminopyrimidine deaminase
           [Staphylococcus epidermidis BCM-HMP0060]
 gi|282875812|ref|ZP_06284679.1| riboflavin biosynthesis protein RibD [Staphylococcus epidermidis
           SK135]
 gi|251805369|gb|EES58026.1| possible diaminohydroxyphosphoribosylaminopyrimidine deaminase
           [Staphylococcus epidermidis BCM-HMP0060]
 gi|281294837|gb|EFA87364.1| riboflavin biosynthesis protein RibD [Staphylococcus epidermidis
           SK135]
 gi|329730651|gb|EGG67035.1| riboflavin biosynthesis protein RibD [Staphylococcus epidermidis
           VCU144]
 gi|329737423|gb|EGG73677.1| riboflavin biosynthesis protein RibD [Staphylococcus epidermidis
           VCU028]
          Length = 347

 Score =  106 bits (265), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 37/151 (24%), Positives = 61/151 (40%), Gaps = 24/151 (15%)

Query: 7   FMSCALEEAQNAALRNEI--PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           FM  A++ A+    +  +  PVG+V V N +I+    +  +  K    HAE+ AI M   
Sbjct: 4   FMDDAIQLAKMVNGQTGVNPPVGSVVVKNGRIVGLGAHLKKGDK----HAEVQAIEMAGL 59

Query: 65  ILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
                      +YV+LEPC        C   I  A I ++ Y   +     +  G +   
Sbjct: 60  NTQ-----GATIYVSLEPCTHHGSTPPCVDKIIEAGISKVIYAVKDTTL--VSKGDEILR 112

Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
            A      E+    +E  +  + +DFF  +R
Sbjct: 113 EAG----IEVEFQYNEN-AAALYRDFFTAKR 138


>gi|57867218|ref|YP_188900.1| riboflavin biosynthesis protein RibD [Staphylococcus epidermidis
           RP62A]
 gi|57637876|gb|AAW54664.1| riboflavin biosynthesis protein RibD [Staphylococcus epidermidis
           RP62A]
          Length = 347

 Score =  106 bits (265), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 37/151 (24%), Positives = 61/151 (40%), Gaps = 24/151 (15%)

Query: 7   FMSCALEEAQNAALRNEI--PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           FM  A++ A+    +  +  PVG+V V N +I+    +  +  K    HAE+ AI M   
Sbjct: 4   FMDDAIQLAKMVNGQTGVNPPVGSVVVKNGRIVGLGAHLKKGDK----HAEVQAIEMAGL 59

Query: 65  ILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
                      +YV+LEPC        C   I  A I ++ Y   +     +  G +   
Sbjct: 60  NTQ-----GATIYVSLEPCTHHGSTPPCVDKIIEAGISKVIYAVKDTTL--VSKGDEILR 112

Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
            A      E+    +E  +  + +DFF  +R
Sbjct: 113 EAG----IEVEFQYNEN-AAALYRDFFTAKR 138


>gi|196001961|ref|XP_002110848.1| hypothetical protein TRIADDRAFT_54182 [Trichoplax adhaerens]
 gi|190586799|gb|EDV26852.1| hypothetical protein TRIADDRAFT_54182 [Trichoplax adhaerens]
          Length = 283

 Score =  106 bits (265), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 36/157 (22%), Positives = 63/157 (40%), Gaps = 27/157 (17%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLN--NKIISRA--GNRNRELKDVTAHAEILAIRMGC 63
           M  A+     A   +   +GAV V    NK++++A  G        +  HA +  I    
Sbjct: 129 MDIAIS---TALENSMFKIGAVMVDPESNKVLAKASDGRSRNVDSSLLKHAVMTCIDDIG 185

Query: 64  RIL--------------------SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
           ++                        +    DLYVT EPC MCA A+  +RI+R++Y   
Sbjct: 186 KMHVAVENTNNSSKLPNEESNNQRGYLCTGYDLYVTKEPCVMCAMALVHSRIKRVFYAVE 245

Query: 104 NPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140
           + + G + +  + +     +H  E++  I   R  Q+
Sbjct: 246 DKEYGALGSRYKIHVHEGLNHHFEVFKNIYRDRCLQL 282


>gi|20139385|sp|P57533|RIBD1_BUCAI RecName: Full=Diaminohydroxyphosphoribosylamino-pyrimidine
           deaminase; Short=DRAP deaminase; AltName:
           Full=Riboflavin-specific deaminase
          Length = 147

 Score =  106 bits (265), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 39/157 (24%), Positives = 56/157 (35%), Gaps = 29/157 (18%)

Query: 3   KGNVFMSCALEEAQNAALRNEI-----P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56
               +M  A+E ++      E      P VG V V NN I+    +          HAEI
Sbjct: 2   NDIFYMKRAIELSKL----GEFTTAPNPNVGCVIVKNNIIVGEGWHEQAGKN----HAEI 53

Query: 57  LAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGI 110
            A+ M               YVTLEPC        C  A+  + I R+     +P     
Sbjct: 54  NALIMAGEKAQ-----GGTAYVTLEPCNHFGKTPPCCNALIKSGINRVVISNIDPNPKIS 108

Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
            NG  +       H   +  G+  + S+Q  + FFK 
Sbjct: 109 GNGILYLKK----HGICVKTGLLSKESKQYNKGFFKR 141


>gi|228987304|ref|ZP_04147425.1| RibD (Riboflavin-specific deaminase) [Bacillus thuringiensis
           serovar tochigiensis BGSC 4Y1]
 gi|228772533|gb|EEM20978.1| RibD (Riboflavin-specific deaminase) [Bacillus thuringiensis
           serovar tochigiensis BGSC 4Y1]
          Length = 379

 Score =  106 bits (265), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 35/158 (22%), Positives = 59/158 (37%), Gaps = 24/158 (15%)

Query: 3   KGNVFMSCALEEAQ-NAALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
               +M  AL+ A+  +   +  P VGAV V +  I+    +     +    HAE+ A+ 
Sbjct: 11  TDQEYMRIALQLAEGTSGQTSPNPMVGAVVVKDGNIVGMGAHLRAGEE----HAEVHALH 66

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           M              +YVTLEPC        C   +    ++R+     +       NG 
Sbjct: 67  MAGEKA-----KGATVYVTLEPCSHFGKTPPCCDLLLKKGVKRVVIATLDCNPLVSGNGK 121

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF---KERR 149
           +    A      E+  G+ E  +  + + FF   K +R
Sbjct: 122 RRLEEAG----IEVTTGVLEAEAVLLNRYFFHYMKTKR 155


>gi|21672710|ref|NP_660777.1| riboflavin biosynthesis protein RibD [Buchnera aphidicola str. Sg
           (Schizaphis graminum)]
 gi|25091139|sp|Q8K9A4|RIBD1_BUCAP RecName: Full=Diaminohydroxyphosphoribosylamino-pyrimidine
           deaminase; Short=DRAP deaminase; AltName:
           Full=Riboflavin-specific deaminase
 gi|21623353|gb|AAM67988.1| riboflavin biosynthesis protein RibD [Buchnera aphidicola str. Sg
           (Schizaphis graminum)]
          Length = 147

 Score =  106 bits (265), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 36/159 (22%), Positives = 59/159 (37%), Gaps = 29/159 (18%)

Query: 3   KGNVFMSCALEEAQNAALRNEI-----P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56
           K   +M+ A++ ++      E      P VG V V N KI+    ++         HAEI
Sbjct: 2   KDRFYMTRAIKLSKL----GEFTTSPNPNVGCVIVQNKKIVGEGWHKKYGEN----HAEI 53

Query: 57  LAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGI 110
            A+ M               Y+TLEPC        C  AI  + I+ +   + +P     
Sbjct: 54  NALNMAGEKA-----KGSTAYITLEPCNHFGKTPPCCDAIIQSGIKNVIISSLDPNPKVS 108

Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             G  +           +  G+  + S++  + FFK  R
Sbjct: 109 GKGVLYLRKKG----ISVKIGLMSKESQKYNKGFFKRMR 143


>gi|47568170|ref|ZP_00238874.1| riboflavin biosynthesis protein RibD [Bacillus cereus G9241]
 gi|47555160|gb|EAL13507.1| riboflavin biosynthesis protein RibD [Bacillus cereus G9241]
          Length = 370

 Score =  106 bits (265), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 35/158 (22%), Positives = 59/158 (37%), Gaps = 24/158 (15%)

Query: 3   KGNVFMSCALEEAQ-NAALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
               +M  AL+ A+  +   +  P VGAV V +  I+    +     +    HAE+ A+ 
Sbjct: 2   TDQEYMRIALQLAEGTSGQTSPNPMVGAVVVKDGNIVGMGAHLRAGEE----HAEVHALH 57

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           M              +YVTLEPC        C   +    ++R+     +       NG 
Sbjct: 58  MAGEKA-----KGATVYVTLEPCSHFGKTPPCCDLLLKKGVKRVVIATLDCNPLVSGNGK 112

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF---KERR 149
           +    A      E+  G+ E  +  + + FF   K +R
Sbjct: 113 RRLEEAG----IEVTTGVLEAEAVLLNRYFFHYMKTKR 146


>gi|107103570|ref|ZP_01367488.1| hypothetical protein PaerPA_01004640 [Pseudomonas aeruginosa PACS2]
 gi|218889663|ref|YP_002438527.1| riboflavin-specific deaminase/reductase [Pseudomonas aeruginosa
           LESB58]
 gi|218769886|emb|CAW25647.1| riboflavin-specific deaminase/reductase [Pseudomonas aeruginosa
           LESB58]
          Length = 373

 Score =  106 bits (265), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 35/152 (23%), Positives = 55/152 (36%), Gaps = 21/152 (13%)

Query: 4   GNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
             ++M+ ALE A+           VG V V + +++    +          HAE+ A+R 
Sbjct: 5   DPLYMARALELARQGLYSTHPNPRVGCVLVKDGQVVGEGWHVRAGE----PHAEVHALRQ 60

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
                  E       YVTLEPC        CA A+  A + R+     +P       G  
Sbjct: 61  AG-----ENARGATAYVTLEPCSHFGRTPPCADALVGAGVARVVAAMQDPNPEVAGRGLL 115

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
               A       +  G+ E  +R++   F K 
Sbjct: 116 RLMQAG----IAVQSGVLEAEARELNIGFIKR 143


>gi|254242738|ref|ZP_04936060.1| riboflavin-specific deaminase/reductase [Pseudomonas aeruginosa
           2192]
 gi|126196116|gb|EAZ60179.1| riboflavin-specific deaminase/reductase [Pseudomonas aeruginosa
           2192]
          Length = 373

 Score =  106 bits (265), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 35/152 (23%), Positives = 55/152 (36%), Gaps = 21/152 (13%)

Query: 4   GNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
             ++M+ ALE A+           VG V V + +++    +          HAE+ A+R 
Sbjct: 5   DPLYMARALELARQGLYSTHPNPRVGCVLVKDGQVVGEGWHVRAGE----PHAEVHALRQ 60

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
                  E       YVTLEPC        CA A+  A + R+     +P       G  
Sbjct: 61  AG-----ENARGATAYVTLEPCSHFGRTPPCADALVGAGVARVVAAMQDPNPEVAGRGLL 115

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
               A       +  G+ E  +R++   F K 
Sbjct: 116 RLMQAG----IAVQSGVLEAEARELNIGFIKR 143


>gi|282859870|ref|ZP_06268958.1| riboflavin biosynthesis protein RibD [Prevotella bivia JCVIHMP010]
 gi|282587273|gb|EFB92490.1| riboflavin biosynthesis protein RibD [Prevotella bivia JCVIHMP010]
          Length = 314

 Score =  106 bits (265), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 38/156 (24%), Positives = 60/156 (38%), Gaps = 21/156 (13%)

Query: 1   MKK---GNVFMSCALEEAQNA--ALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHA 54
           M++     ++M   L+ A N     +    VGAV V N  +II    +     +    HA
Sbjct: 1   MERQDIDEMYMRRCLQLATNGKLLAKPNPMVGAVIVSNEGRIIGEGYHVRCGEE----HA 56

Query: 55  EILAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGG 108
           E+ A     R   + +L +  +YV+LEPC        CA  I    ++R+  G  +P   
Sbjct: 57  EVNAF-ASVRKEDESLLSDSTIYVSLEPCSHFGKTPPCANLIIKKGVKRVVCGCVDPFSK 115

Query: 109 GIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
               G Q    A      E+  G+ E     +   F
Sbjct: 116 VQGRGIQRIREAG----IEVTVGVLEAECLVLNNRF 147


>gi|253687420|ref|YP_003016610.1| riboflavin biosynthesis protein RibD [Pectobacterium carotovorum
           subsp. carotovorum PC1]
 gi|251753998|gb|ACT12074.1| riboflavin biosynthesis protein RibD [Pectobacterium carotovorum
           subsp. carotovorum PC1]
          Length = 378

 Score =  106 bits (265), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 37/155 (23%), Positives = 55/155 (35%), Gaps = 21/155 (13%)

Query: 3   KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +  ++M+ ALE A+         P VG V V +  I+    +          HAE+ A+R
Sbjct: 12  QDELYMARALELARRGRFTTAPNPNVGCVIVRDGDIVGEGYHFRAGE----PHAEVHALR 67

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           M       E       YVTLEPC        CA A+  A + R+     +P       G 
Sbjct: 68  MAG-----ERARGATAYVTLEPCSHHGRTPPCADALVAAGVSRVVAAMQDPNPQVAGRGL 122

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
                A       +  G     + ++   F K  R
Sbjct: 123 HRLQQAG----IAVSHGFMMAEAEKVNVGFLKRMR 153


>gi|300784804|ref|YP_003765095.1| cytosine deaminase [Amycolatopsis mediterranei U32]
 gi|299794318|gb|ADJ44693.1| cytosine deaminase [Amycolatopsis mediterranei U32]
          Length = 152

 Score =  105 bits (264), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 31/143 (21%), Positives = 54/143 (37%), Gaps = 15/143 (10%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           ++ A EEA+       +P+GA    +   ++ R  NR  +  D + HAE  A R   R  
Sbjct: 9   LAVAREEAELGKAEGGVPIGAALFDSTGTLLGRGHNRRVQDGDPSMHAETAAFRNAGR-- 66

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
            +    +  +  TL PC  C+  +    I R+  G +    GG +               
Sbjct: 67  -RPHYRDTIMVTTLSPCWYCSGLVRQFGIGRVVIGEAETFHGGHDWLAGL--------GV 117

Query: 127 EIYPGISEQR-SRQIIQDFFKER 148
           EI   + +      ++ +F   R
Sbjct: 118 EIT--LLDDPGCTALMTEFIAAR 138


>gi|138895866|ref|YP_001126319.1| riboflavin biosynthesis protein RibD [Geobacillus
           thermodenitrificans NG80-2]
 gi|134267379|gb|ABO67574.1| Riboflavin biosynthesis protein RibD [Geobacillus
           thermodenitrificans NG80-2]
          Length = 359

 Score =  105 bits (264), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 36/146 (24%), Positives = 57/146 (39%), Gaps = 21/146 (14%)

Query: 8   MSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M  AL+ A+    +      VGAV V +  I+    +          HAE+ AIRM    
Sbjct: 1   MRLALDVAKAGVGQTSPNPAVGAVVVNDGTIVGIGAHLKAGE----PHAEVHAIRMAGEK 56

Query: 66  LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
                     +YVTLEPC        CA  +  A +RR+    ++P       G      
Sbjct: 57  A-----RGATVYVTLEPCSHYGKTPPCADLLIEAGVRRVVVATTDPNPLVAGKGINKLRR 111

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFF 145
           A      ++  GI ++ + ++ + FF
Sbjct: 112 AG----IDVEVGILKEEADELNRMFF 133


>gi|68171296|ref|ZP_00544696.1| Riboflavin biosynthesis protein RibD [Ehrlichia chaffeensis str.
           Sapulpa]
 gi|88658608|ref|YP_506994.1| riboflavin biosynthesis protein RibD [Ehrlichia chaffeensis str.
           Arkansas]
 gi|67999277|gb|EAM85926.1| Riboflavin biosynthesis protein RibD [Ehrlichia chaffeensis str.
           Sapulpa]
 gi|88600065|gb|ABD45534.1| riboflavin biosynthesis protein RibD [Ehrlichia chaffeensis str.
           Arkansas]
          Length = 360

 Score =  105 bits (264), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 34/155 (21%), Positives = 63/155 (40%), Gaps = 25/155 (16%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56
           ++    FMS AL  A+       +   P VG + V +  ++ R   +         HAE+
Sbjct: 2   IRYDKKFMSLALRIARRGL--GNVFPNPAVGCIVVNHGMVVGRGYTQVGGR----PHAEV 55

Query: 57  LAIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGI 110
           +A+     +          +YVTLEPC+       CA  +  A ++R+   A +P     
Sbjct: 56  IALNNAGHLA-----KGSTVYVTLEPCSHYGQTGPCALKLIDAGVKRMVIAAKDPDVRVS 110

Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
            NG +       +   ++  G+  + +R++   FF
Sbjct: 111 GNGIELLR----NAGIDVKCGVMYEEARELNIGFF 141


>gi|288926889|ref|ZP_06420789.1| riboflavin biosynthesis protein RibD [Prevotella buccae D17]
 gi|288336328|gb|EFC74709.1| riboflavin biosynthesis protein RibD [Prevotella buccae D17]
          Length = 286

 Score =  105 bits (264), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 39/151 (25%), Positives = 57/151 (37%), Gaps = 18/151 (11%)

Query: 3   KGNVFMSCALEEAQNAALRN--EIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAI 59
               FM   L+ A+N          VGAV V  + +II    +          HAE+ A 
Sbjct: 25  TDEKFMRRCLQLARNGRQNAKPNPMVGAVIVSPDGRIIGEGYHVRCGEG----HAEVNAF 80

Query: 60  RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113
               R   + +L E  +YV+LEPC        CA  I    +RR+  G  +P       G
Sbjct: 81  -ASVRPEDEALLHESTIYVSLEPCSHFGKTPPCADLIVRKGVRRVVCGCIDPFAEVSGRG 139

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
            +    A      E+  G+ EQ    + + F
Sbjct: 140 VERIRKAG----IEVTVGVLEQECLTLNRRF 166


>gi|333029739|ref|ZP_08457800.1| riboflavin biosynthesis protein RibD [Bacteroides coprosuis DSM
           18011]
 gi|332740336|gb|EGJ70818.1| riboflavin biosynthesis protein RibD [Bacteroides coprosuis DSM
           18011]
          Length = 348

 Score =  105 bits (264), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 43/161 (26%), Positives = 64/161 (39%), Gaps = 25/161 (15%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57
           M K   +M   ++ A    L    P   VGAV V    II    +    ++   AHAE+ 
Sbjct: 1   MDK-EKYMKRCIQLASYGKLHA-APNPLVGAVIVHKGIIIGEGFH----IQSGKAHAEVN 54

Query: 58  AIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIE 111
           AI     +  Q +LPE  ++V+LEPC        C   I   +I  +  G  +P      
Sbjct: 55  AINS---VKDQSLLPESTIFVSLEPCSHTGKTPPCVDLIINKKIPHVVIGCQDPFSKVAG 111

Query: 112 NGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF---KERR 149
            G             EI  GI E   +++I  F+   +E+R
Sbjct: 112 RGIAKLKEQGI--KVEI--GILENECKELIHRFYIFQEEKR 148


>gi|329735920|gb|EGG72197.1| riboflavin biosynthesis protein RibD [Staphylococcus epidermidis
           VCU045]
          Length = 347

 Score =  105 bits (264), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 37/151 (24%), Positives = 61/151 (40%), Gaps = 24/151 (15%)

Query: 7   FMSCALEEAQNAALRNEI--PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           FM  A++ A+    +  +  PVG+V V N +I+    +  +  K    HAE+ AI M   
Sbjct: 4   FMDDAIQLAKMVNGQTGVNPPVGSVVVKNGRIVGLGAHLKKGDK----HAEVQAIEMAGL 59

Query: 65  ILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
                      +YV+LEPC        C   I  A I ++ Y   +     +  G +   
Sbjct: 60  NTQ-----GATIYVSLEPCTHHGSTPPCVHKIIEAGISKVIYAVKDTTL--VSKGDEILR 112

Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
            A      E+    +E  +  + +DFF  +R
Sbjct: 113 EAG----IEVEFQYNEN-AAALYRDFFTAKR 138


>gi|27468359|ref|NP_764996.1| riboflavin specific deaminase [Staphylococcus epidermidis ATCC
           12228]
 gi|27315905|gb|AAO05040.1|AE016748_274 riboflavin specific deaminase [Staphylococcus epidermidis ATCC
           12228]
          Length = 347

 Score =  105 bits (264), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 37/151 (24%), Positives = 61/151 (40%), Gaps = 24/151 (15%)

Query: 7   FMSCALEEAQNAALRNEI--PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           FM  A++ A+    +  +  PVG+V V N +I+    +  +  K    HAE+ AI M   
Sbjct: 4   FMDDAIQLAKMVNGQTGVNPPVGSVVVKNGRIVGLGAHLKKGDK----HAEVQAIEMAGL 59

Query: 65  ILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
                      +YV+LEPC        C   I  A I ++ Y   +     +  G +   
Sbjct: 60  NTQ-----GATIYVSLEPCTHHGSTPPCVHKIIEAGISKVIYAVKDTTL--VSKGDEILR 112

Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
            A      E+    +E  +  + +DFF  +R
Sbjct: 113 EAG----IEVEFQYNEN-AAALYRDFFTAKR 138


>gi|291533443|emb|CBL06556.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase
           /5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Megamonas hypermegale ART12/1]
          Length = 360

 Score =  105 bits (264), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 40/147 (27%), Positives = 63/147 (42%), Gaps = 21/147 (14%)

Query: 8   MSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M  A++ A NA  R    P VGAV V +N+++    +R       T HAE+ A+     +
Sbjct: 1   MRLAMQLAGNAIGRTSPNPLVGAVIVKDNRVVGCGWHREA----GTPHAEVHALNQAGEL 56

Query: 66  LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
                    D+YVTLEPC        C+ A+  A+++ +Y G  +        G +    
Sbjct: 57  AQ-----GADVYVTLEPCAHYGKTPPCSKALVEAKVKNVYGGLLDVNPKVAGKGFKILED 111

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFK 146
           A  H    +  G  +   R+  + FFK
Sbjct: 112 AGIH----VEYGFLQDELRKQNEVFFK 134


>gi|229103925|ref|ZP_04234603.1| Riboflavin biosynthesis protein [Bacillus cereus Rock3-28]
 gi|228679493|gb|EEL33692.1| Riboflavin biosynthesis protein [Bacillus cereus Rock3-28]
          Length = 360

 Score =  105 bits (264), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 44/146 (30%), Positives = 63/146 (43%), Gaps = 23/146 (15%)

Query: 8   MSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           M  ALE A NA      P   VG+V V +N+I+    +          HAEI AIRM   
Sbjct: 1   MKLALENA-NAMKGQTTPNPLVGSVIVNDNRIVGIGAHMKAGE----PHAEIHAIRMAG- 54

Query: 65  ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
               E      +YVTLEPC+       CA AI  A I+++     +P       G +   
Sbjct: 55  ----EQARGGTIYVTLEPCSHHGRTGPCAEAIVQAGIKKVVVATLDPNPLVSGRGIKVLQ 110

Query: 119 LATCHHSPEIYPGISEQRSRQIIQDF 144
            A      E+  G+ E+ S+++ + F
Sbjct: 111 DAG----IEVLVGVCEEESKKMNEVF 132


>gi|239617610|ref|YP_002940932.1| riboflavin biosynthesis protein RibD [Kosmotoga olearia TBF 19.5.1]
 gi|239506441|gb|ACR79928.1| riboflavin biosynthesis protein RibD [Kosmotoga olearia TBF 19.5.1]
          Length = 345

 Score =  105 bits (264), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 42/149 (28%), Positives = 60/149 (40%), Gaps = 18/149 (12%)

Query: 4   GNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
              FM  A+EEA+    L N  P VGAV V N KI+S   +          HAEI+AI  
Sbjct: 2   DEKFMELAIEEARKGEGLVNPNPLVGAVIVKNGKILSTGYHEYFGG----RHAEIVAIEN 57

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
                    +   ++YVTLEPC        C   I       +Y G  +P       G  
Sbjct: 58  A--KKMGYDIKGAEIYVTLEPCVHYGKTPPCTDRIIREGFSAVYIGTLDPNPMVHGKG-- 113

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDF 144
                  +    +  GI E +++++I+ F
Sbjct: 114 --EEKLKNAGICVKHGILEVKAKELIEVF 140


>gi|330976721|gb|EGH76762.1| riboflavin biosynthesis protein RibD [Pseudomonas syringae pv.
           aptata str. DSM 50252]
          Length = 378

 Score =  105 bits (264), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 35/152 (23%), Positives = 54/152 (35%), Gaps = 21/152 (13%)

Query: 4   GNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
              +M+ ALE A+           VG V V   +I+    +          HAE+ A+R 
Sbjct: 9   DVHYMARALEMARKGLYSTHPNPRVGCVIVREGRIVGEGWHARAGE----PHAEVHALRQ 64

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
              +           YVTLEPC        CA A+  A + R+     +P       G  
Sbjct: 65  AGELA-----RGATAYVTLEPCSHQGRTPPCADALIEAGLTRVVAAMQDPNPEVSGRGL- 118

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
              L   +    +  G+ E  +R + + F K 
Sbjct: 119 ---LRLMNAGIGVQCGVLESEARALNKGFLKR 147


>gi|325568121|ref|ZP_08144562.1| riboflavin biosynthesis protein RibD [Enterococcus casseliflavus
           ATCC 12755]
 gi|325158322|gb|EGC70473.1| riboflavin biosynthesis protein RibD [Enterococcus casseliflavus
           ATCC 12755]
          Length = 358

 Score =  105 bits (264), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 38/145 (26%), Positives = 58/145 (40%), Gaps = 19/145 (13%)

Query: 4   GNVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
            N +M  A+ EA+    +      VGAV V   ++I++  +          HAE  AI  
Sbjct: 2   HNEYMRLAIAEAKKGRYQTFTNPLVGAVIVKEQRVIAKGAHLVYGQ----PHAERNAIEQ 57

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
                S E L    LYVTLEPC        C   I  + I+++  G  +P       G +
Sbjct: 58  ---CHSSEDLINSTLYVTLEPCNHQGKQPPCTQLIIDSGIKKVVIGQLDPNPIVAGQGKR 114

Query: 116 FYTLATCHHSPEIYPGISEQRSRQI 140
           F      +   ++  GI E   R++
Sbjct: 115 FLE----NQGIDVLVGIEETEVRRL 135


>gi|124010107|ref|ZP_01694767.1| riboflavin biosynthesis protein RibD [Microscilla marina ATCC
           23134]
 gi|123983875|gb|EAY24280.1| riboflavin biosynthesis protein RibD [Microscilla marina ATCC
           23134]
          Length = 355

 Score =  105 bits (264), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 39/152 (25%), Positives = 65/152 (42%), Gaps = 23/152 (15%)

Query: 4   GNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
              FM  AL+ A   A   ++   P VG V V   +II    ++        AHAE+ A+
Sbjct: 14  DEKFMQRALDLAVLGA--GKVSPNPMVGCVIVHQEQIIGEGWHQFYGK----AHAEVNAV 67

Query: 60  RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113
                + ++ +L E  +YVTLEPC        CA  +   +++R+     +P       G
Sbjct: 68  NA---VENKALLSEATVYVTLEPCAHQGKTPPCADLLIKHQVKRVVVCNQDPHPLVGGKG 124

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
            +    A      E+  GI E + +++ + FF
Sbjct: 125 LEKLRTAG----IEVTVGILEAQGKEVNKRFF 152


>gi|213969282|ref|ZP_03397420.1| conserved hypothetical protein [Pseudomonas syringae pv. tomato T1]
 gi|213925960|gb|EEB59517.1| conserved hypothetical protein [Pseudomonas syringae pv. tomato T1]
          Length = 366

 Score =  105 bits (264), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 35/148 (23%), Positives = 55/148 (37%), Gaps = 21/148 (14%)

Query: 8   MSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M+ ALE A+           VG V V + +I+ +  +          HAE+ A+R    +
Sbjct: 1   MAHALELARKGLYSTHPNPRVGCVIVRDGQIVGQGWHARAGE----PHAEVHALREAGEL 56

Query: 66  LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
                      YVTLEPC        CA A+  A + R+     +P      +G      
Sbjct: 57  A-----RGATAYVTLEPCSHQGRTPPCADALISAGLARVVAAMQDPNPQVAGSGLLRLMT 111

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKE 147
           A       +  G+ E  +R + + F K 
Sbjct: 112 AG----ISVQCGVLESEARALNKGFIKR 135


>gi|190575897|ref|YP_001973742.1| putative deaminase [Stenotrophomonas maltophilia K279a]
 gi|190013819|emb|CAQ47457.1| putative deaminase [Stenotrophomonas maltophilia K279a]
          Length = 150

 Score =  105 bits (264), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 28/147 (19%), Positives = 51/147 (34%), Gaps = 13/147 (8%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRM 61
                +  A+ EA+       +P+GA     + +++    NR  +  D + H E  A R 
Sbjct: 6   DYQALLQTAIAEARQGLAEGGVPIGAALYHNDGRLLGCGHNRRVQEGDPSVHGETDAFRK 65

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
             R   Q    +  +  TL PC  C+  +    I  +  G S    GGI     +     
Sbjct: 66  AGR---QRRYQDTIMVTTLAPCWYCSGLVRQFNIGTVVVGESRTFQGGI----DWLRENG 118

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKER 148
            +    +   +  Q    ++  F  + 
Sbjct: 119 VN----VID-LDSQECVDLLGGFIAQH 140


>gi|229134920|ref|ZP_04263727.1| RibD (Riboflavin-specific deaminase) [Bacillus cereus BDRD-ST196]
 gi|228648595|gb|EEL04623.1| RibD (Riboflavin-specific deaminase) [Bacillus cereus BDRD-ST196]
          Length = 379

 Score =  105 bits (264), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 37/158 (23%), Positives = 61/158 (38%), Gaps = 24/158 (15%)

Query: 3   KGNVFMSCALEEAQ-NAALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
               +M  AL+ AQ  +   +  P VGAV V + KI+    +     +    HAE+ A+ 
Sbjct: 11  TDQEYMRIALQLAQGTSGQTSPNPMVGAVVVKDGKIVGMGAHMRAGEE----HAEVHALH 66

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           M       E   +  +YVTLEPC        C   +    ++R+     +       NG 
Sbjct: 67  MAG-----ERAKDATVYVTLEPCSHFGKTPPCCELLIEKGVQRVVIATLDCNPLVSGNGK 121

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF---KERR 149
           +           E+  G+ E  +  + + FF   K +R
Sbjct: 122 RKLEEVG----IEVTTGVLEAEATLLNRYFFHYMKTKR 155


>gi|254236945|ref|ZP_04930268.1| riboflavin-specific deaminase/reductase [Pseudomonas aeruginosa
           C3719]
 gi|126168876|gb|EAZ54387.1| riboflavin-specific deaminase/reductase [Pseudomonas aeruginosa
           C3719]
          Length = 373

 Score =  105 bits (264), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 35/152 (23%), Positives = 55/152 (36%), Gaps = 21/152 (13%)

Query: 4   GNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
             ++M+ ALE A+           VG V V + +++    +          HAE+ A+R 
Sbjct: 5   DPLYMARALELARQGLYSTHPNPRVGCVLVKDGQVVGEGWHVRAGE----PHAEVHALRQ 60

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
                  E       YVTLEPC        CA A+  A + R+     +P       G  
Sbjct: 61  AG-----ENARGATAYVTLEPCSHFGRTPPCADALVGAGVARVVAAMQDPNPEVAGRGLL 115

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
               A       +  G+ E  +R++   F K 
Sbjct: 116 RLMQAG----IAVQSGVLEAEARELNIGFIKR 143


>gi|313680606|ref|YP_004058345.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase;
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Oceanithermus profundus DSM 14977]
 gi|313153321|gb|ADR37172.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase;
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Oceanithermus profundus DSM 14977]
          Length = 380

 Score =  105 bits (264), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 40/150 (26%), Positives = 59/150 (39%), Gaps = 22/150 (14%)

Query: 4   GNVFMSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
              FM  AL  A+ A       P VGAV V   +I+    +          HAE+ A+R 
Sbjct: 7   DRRFMQRALALAERARGHTSPNPIVGAVVVSGGRIVGEGFHPRAGE----PHAEVFALRQ 62

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
                         +YVTLEPC        C+ A+  A + R+ Y A++P   G  +G  
Sbjct: 63  AGEAA-----RGATVYVTLEPCNHHGRTPPCSLALLEAGVSRVVYAAADP---GETSGGG 114

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
              L        +  G+ E+ +R   + FF
Sbjct: 115 AERLRRA--GVRVEAGLLEEEARVQNRAFF 142


>gi|152986432|ref|YP_001346431.1| riboflavin-specific deaminase/reductase [Pseudomonas aeruginosa
           PA7]
 gi|150961590|gb|ABR83615.1| riboflavin biosynthesis protein RibD [Pseudomonas aeruginosa PA7]
          Length = 373

 Score =  105 bits (264), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 34/152 (22%), Positives = 55/152 (36%), Gaps = 21/152 (13%)

Query: 4   GNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
             ++M+ ALE A+           VG V V + +++    +          HAE+ A+R 
Sbjct: 5   DPLYMARALELARQGLYSTHPNPRVGCVLVRDGQVVGEGWHVRAGE----PHAEVHALRQ 60

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
                          YVTLEPC        CA A+  A + R+     +P       G  
Sbjct: 61  AGEKA-----RGATAYVTLEPCSHFGRTPPCADALVGAGVARVVAAMQDPNPEVAGRGLL 115

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
               A       ++ G+ E  +R++   F K 
Sbjct: 116 RLMQAG----IAVHSGVLEAEARELNIGFIKR 143


>gi|313895132|ref|ZP_07828689.1| riboflavin biosynthesis protein RibD [Selenomonas sp. oral taxon
           137 str. F0430]
 gi|312976027|gb|EFR41485.1| riboflavin biosynthesis protein RibD [Selenomonas sp. oral taxon
           137 str. F0430]
          Length = 386

 Score =  105 bits (264), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 44/152 (28%), Positives = 64/152 (42%), Gaps = 21/152 (13%)

Query: 3   KGNVFMSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +   FM  AL  A+ A  R    P VGAV V +  ++    +R         HAEI A+R
Sbjct: 24  RDEHFMWEALHLAEFARGRTSPNPLVGAVIVRDGIVVGSGWHRAAGE----PHAEIHALR 79

Query: 61  MGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGT 114
           M   +          LYVTLEPC+       CA A+  A I R+    S+P      +G 
Sbjct: 80  MAGELA-----RGATLYVTLEPCSHHGRTGPCAEAVIAAGIARVVTALSDPNPVVAGHGI 134

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
           +    A      E+  G+  + +R+  + F K
Sbjct: 135 ERLRAAG----IEVTTGVLSEEARRQNEVFLK 162


>gi|78485744|ref|YP_391669.1| riboflavin biosynthesis protein RibD [Thiomicrospira crunogena
           XCL-2]
 gi|78364030|gb|ABB41995.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase /
           diaminohydroxyphosphoribosylaminopyrimidine deaminase
           [Thiomicrospira crunogena XCL-2]
          Length = 391

 Score =  105 bits (264), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 31/145 (21%), Positives = 53/145 (36%), Gaps = 21/145 (14%)

Query: 8   MSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M  A++ A+      +    VG V      II+   ++         HAE +A+      
Sbjct: 17  MQRAIDLARKGLYSTKPNPAVGCVITQQENIIAEGWHQKAGE----PHAERVALANA--- 69

Query: 66  LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
              E +    +YVTLEPC        CA A+  + + R+     +P      NG +    
Sbjct: 70  --TESVKGATVYVTLEPCSHHGKTPPCADALVDSGVARVVIAMQDPNPLVAGNGIKRLEQ 127

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDF 144
           A       +  GI  + +  + + F
Sbjct: 128 AG----IVVDSGILSEEAAALNKGF 148


>gi|319955752|ref|YP_004167019.1| riboflavin biosynthesis protein ribd [Cellulophaga algicola DSM
           14237]
 gi|319424412|gb|ADV51521.1| riboflavin biosynthesis protein RibD [Cellulophaga algicola DSM
           14237]
          Length = 351

 Score =  105 bits (264), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 43/158 (27%), Positives = 60/158 (37%), Gaps = 21/158 (13%)

Query: 1   MKKGNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           MK    ++   ++ AQN          VGAV V  NKII               HAE+ A
Sbjct: 1   MKIHEFYILRCIQIAQNGLGTTAPNPMVGAVIVHENKIIGEGYTSPYGG----PHAEVNA 56

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
           I          +L    +YVTLEPC        CA  I   +I+ +  G  +P       
Sbjct: 57  INAVADKN---LLVNATIYVTLEPCSHHGKTPPCADLIIKHKIKNVVVGLLDPHEKVAGQ 113

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDF--FKER 148
           G Q    A C     +  G+ E   R+  + F  F+E+
Sbjct: 114 GIQKLKDAGC----TVTVGVLENECREHHKRFLTFQEK 147


>gi|156935037|ref|YP_001438953.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Cronobacter sakazakii ATCC BAA-894]
 gi|156533291|gb|ABU78117.1| hypothetical protein ESA_02888 [Cronobacter sakazakii ATCC BAA-894]
          Length = 367

 Score =  105 bits (264), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 34/155 (21%), Positives = 50/155 (32%), Gaps = 21/155 (13%)

Query: 3   KGNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
               +M+ AL+ A            VG V V    I+    +          HAE+ A+R
Sbjct: 2   SDEFYMARALKLAGQGRFTTHPNPRVGCVIVKEGVIVGEGFHLRAGG----PHAEVHALR 57

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           M               YVTLEPC        C  A+  A + R+     +P       G 
Sbjct: 58  MAGDKA-----RGATAYVTLEPCSHHGRTPPCCDALINAGVARVVAAMQDPNPQVAGRGL 112

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
                A      E+  G+    +  + + F K  R
Sbjct: 113 YRLQQAG----IEVSHGLMMSEAEALNKGFLKRMR 143


>gi|320586926|gb|EFW99589.1| cytosine deaminase [Grosmannia clavigera kw1407]
          Length = 170

 Score =  105 bits (264), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 31/156 (19%), Positives = 58/156 (37%), Gaps = 20/156 (12%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP-------VGAVAV-LNNKIISRAGNRNRELKDVTA 52
           M      +  AL+EA+       +P       +GA  V  +  ++ +  N+  +L     
Sbjct: 1   MLSDQEALQIALDEAKAGFAEGGVPPRLTMAQIGAALVSADGTLMGKGRNQRVQLGSPIH 60

Query: 53  HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN 112
           H E   +    R+ +        +Y TL PC MC  A  L  I+R+  G +    GG   
Sbjct: 61  HGETSTLYNTGRLSASAY-KGSTMYTTLSPCDMCTGACILYGIKRVVIGENRTFLGGEAY 119

Query: 113 GTQFYTLATCHHSPEIYPGISEQ-RSRQIIQDFFKE 147
             Q           ++   + +    R++++ F  +
Sbjct: 120 LKQ--------RGIDVV--VLDNSECRELMEAFIAK 145


>gi|296387387|ref|ZP_06876886.1| riboflavin-specific deaminase/reductase [Pseudomonas aeruginosa
           PAb1]
          Length = 373

 Score =  105 bits (264), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 35/152 (23%), Positives = 55/152 (36%), Gaps = 21/152 (13%)

Query: 4   GNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
             ++M+ ALE A+           VG V V + +++    +          HAE+ A+R 
Sbjct: 5   DPLYMARALELARQGLYSTHPNPRVGCVLVKDGQVVGEGWHVRAGE----PHAEVHALRQ 60

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
                  E       YVTLEPC        CA A+  A + R+     +P       G  
Sbjct: 61  AG-----ENARGATAYVTLEPCSHFGRTPPCADALVGAGVARVVAAMQDPNPEVAGRGLL 115

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
               A       +  G+ E  +R++   F K 
Sbjct: 116 RLMQAG----IAVQSGVLEAEARELNIGFIKR 143


>gi|326560692|gb|EGE11060.1| riboflavin biosynthesis protein RibD [Moraxella catarrhalis
           46P47B1]
          Length = 350

 Score =  105 bits (263), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 36/157 (22%), Positives = 62/157 (39%), Gaps = 18/157 (11%)

Query: 1   MKKGNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           +++   +M  A+  A+      R    VG V V ++ +I +  +     K    HAEI A
Sbjct: 7   IQQDIYYMQLAIAAAKKGIYTTRPNPAVGCVLVKDSLVIGQGYH----PKAGQPHAEIFA 62

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
           +                 YVTLEPC        CA A+  A ++R+   + +P      N
Sbjct: 63  L--ADAKAQGFDTKGATAYVTLEPCSHTGRTPPCADALIAADLKRVVIASLDPNPKVAGN 120

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
           G +       +   E+  G+ +Q++  +   F K  R
Sbjct: 121 GIKKLQ----NAGIEVLVGVCDQQAAALNLGFLKAMR 153


>gi|86609303|ref|YP_478065.1| riboflavin biosynthesis protein RibD [Synechococcus sp.
           JA-2-3B'a(2-13)]
 gi|86557845|gb|ABD02802.1| riboflavin biosynthesis protein RibD [Synechococcus sp.
           JA-2-3B'a(2-13)]
          Length = 370

 Score =  105 bits (263), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 35/155 (22%), Positives = 58/155 (37%), Gaps = 27/155 (17%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP-----VGAVAVLNNKIISRAGNRNRELKDVTAHAE 55
           M     +M   L  A++   R   P     V  V V  ++++    +          HAE
Sbjct: 1   MISDQQWMERCLSLARSTPQR---PSPNPRVSCVIVQGDRVVGEGVH----PGAGQPHAE 53

Query: 56  ILAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGG 109
           +LA++    +          LYV LEPC        C  AI  A IRR+  G  +P    
Sbjct: 54  VLALQQAGSLA-----RGATLYVNLEPCNHYGRTPPCTEAILAAGIRRVVVGMQDPNPLV 108

Query: 110 IENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
              G +    A      ++  G+ E+  +++ + F
Sbjct: 109 AGKGIRRLQEAG----IDVTVGVLERECQELNEGF 139


>gi|307546181|ref|YP_003898660.1| riboflavin biosynthesis protein RibD [Halomonas elongata DSM 2581]
 gi|307218205|emb|CBV43475.1| riboflavin biosynthesis protein RibD [Halomonas elongata DSM 2581]
          Length = 384

 Score =  105 bits (263), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 34/151 (22%), Positives = 52/151 (34%), Gaps = 21/151 (13%)

Query: 5   NVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
             +M+ AL  A++          VG V V   ++I    +          HAEI A+R  
Sbjct: 8   ERWMARALRLARHGLYTTAPNPRVGCVLVKEGRVIGEGWHERAGE----PHAEIHALRNA 63

Query: 63  CRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQF 116
                         YVTLEPC+       CA A+  A + R+     +P       G + 
Sbjct: 64  GEAA-----RGATAYVTLEPCSHQGRTGPCAVALVEAGVARVVVAMRDPNPQVAGRGIER 118

Query: 117 YTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
              A      E+  G+ E  +  +   F   
Sbjct: 119 LRQAG----IEVEEGVLEAEAHALNSGFIAR 145


>gi|257483265|ref|ZP_05637306.1| riboflavin biosynthesis protein RibD [Pseudomonas syringae pv.
           tabaci ATCC 11528]
          Length = 167

 Score =  105 bits (263), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 36/152 (23%), Positives = 56/152 (36%), Gaps = 21/152 (13%)

Query: 4   GNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
              +M+ ALE A+N          VG V V + +I+    +          HAE+ A+R 
Sbjct: 9   DVHYMARALELARNGLYSTHPNPRVGCVIVRDGQIVGEGWHVRAGE----PHAEVHALRQ 64

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
              +           YVTLEPC        CA A+  A + R+     +P       G  
Sbjct: 65  AGELA-----RGATAYVTLEPCSHQGRTPPCADALVNAGLARVVAAMQDPNPEVSGRGL- 118

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
              L   +    +  G+ E  +R + + F K 
Sbjct: 119 ---LRLMNAGIGVQCGVLESEARALNKGFLKR 147


>gi|326571732|gb|EGE21745.1| riboflavin biosynthesis protein RibD [Moraxella catarrhalis BC8]
 gi|326571813|gb|EGE21819.1| riboflavin biosynthesis protein RibD [Moraxella catarrhalis BC7]
 gi|326574353|gb|EGE24296.1| riboflavin biosynthesis protein RibD [Moraxella catarrhalis CO72]
          Length = 350

 Score =  105 bits (263), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 36/157 (22%), Positives = 62/157 (39%), Gaps = 18/157 (11%)

Query: 1   MKKGNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           +++   +M  A+  A+      R    VG V V ++ +I +  +     K    HAEI A
Sbjct: 7   IQQDIYYMQLAIAAAKKGIYTTRPNPAVGCVLVKDSLVIGQGYH----PKAGQPHAEIFA 62

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
           +                 YVTLEPC        CA A+  A ++R+   + +P      N
Sbjct: 63  L--ADAKAQGFDTKGATAYVTLEPCSHTGRTPPCADALIAADLKRVVIASLDPNPKVAGN 120

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
           G +       +   E+  G+ +Q++  +   F K  R
Sbjct: 121 GIKKLQ----NAGIEVLVGVCDQQAAALNLGFLKAMR 153


>gi|300871035|ref|YP_003785907.1| riboflavin biosynthesis protein RibD [Brachyspira pilosicoli
           95/1000]
 gi|300688735|gb|ADK31406.1| riboflavin biosynthesis protein, RibD [Brachyspira pilosicoli
           95/1000]
          Length = 365

 Score =  105 bits (263), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 37/154 (24%), Positives = 61/154 (39%), Gaps = 26/154 (16%)

Query: 4   GNVFMSCALEEAQNAALRNEI-----P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57
              +M  A+EEA+      E      P VGAV V ++++I    ++         HAEI 
Sbjct: 2   HEKYMRMAIEEAKK----GEGFTSPNPLVGAVIVKDDRVIGIGYHKKYGEN----HAEIN 53

Query: 58  AIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIE 111
           A        + E +    +YVTLEPC        CA AI   +++++  G  +       
Sbjct: 54  AFLNA--KENGEDVEGASIYVTLEPCSHYGKTPPCADAIIKNKLKKVIIGCVDSNPKVAG 111

Query: 112 NGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
           NG +    A       +      +  R++ + FF
Sbjct: 112 NGIKKLKDAGIEVVVNVLE----EECRKLNEVFF 141


>gi|71276434|ref|ZP_00652710.1| Riboflavin biosynthesis protein RibD:Riboflavin-specific deaminase,
           C-terminal [Xylella fastidiosa Dixon]
 gi|170730982|ref|YP_001776415.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase,
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Xylella fastidiosa M12]
 gi|71162750|gb|EAO12476.1| Riboflavin biosynthesis protein RibD:Riboflavin-specific deaminase,
           C-terminal [Xylella fastidiosa Dixon]
 gi|167965775|gb|ACA12785.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase,
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Xylella fastidiosa M12]
          Length = 364

 Score =  105 bits (263), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 36/150 (24%), Positives = 56/150 (37%), Gaps = 21/150 (14%)

Query: 3   KGNVFMSCALEEAQN-AALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
             +  M  AL  A+  A      P VG V V + +++    ++     D   HAE+ A+R
Sbjct: 7   DDHCHMERALCLAERGAYTTRPNPMVGCVIVHDGEVVGEGWHQR--AGDP--HAEVFALR 62

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
                           YVTLEPC        CA A+  A +RR+     +P       G 
Sbjct: 63  AAGDCA-----RGATAYVTLEPCAHSGRTPPCAMALIDAGVRRVVAAMVDPFPLVNGGGV 117

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
                A       +  G+ E ++R + + F
Sbjct: 118 TLLRAAG----VTVEHGLMEAQARALNRGF 143


>gi|154486847|ref|ZP_02028254.1| hypothetical protein BIFADO_00679 [Bifidobacterium adolescentis
           L2-32]
 gi|154084710|gb|EDN83755.1| hypothetical protein BIFADO_00679 [Bifidobacterium adolescentis
           L2-32]
          Length = 269

 Score =  105 bits (263), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 35/153 (22%), Positives = 55/153 (35%), Gaps = 18/153 (11%)

Query: 1   MKKGNVFMSCALEEAQN-AALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           M +   +M+ ALE A+  A   +  P VGAV V   ++++   +          HAE +A
Sbjct: 8   MLQYREYMAQALELARKGAGWVDPNPLVGAVVVSGGEVLATGYHDRYRG----PHAERMA 63

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
                       L    +  TLEPC        C   I    I R+  G+ +P       
Sbjct: 64  FDYADAH--GIDLTGATVIDTLEPCCHVGSQPACTDLILAHGIARVVVGSVDPNPIVAGK 121

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
           G +    A      E+   +  +    I + FF
Sbjct: 122 GLRILEEAG----VEVVRDVMREECDAINRHFF 150


>gi|77361290|ref|YP_340865.1| riboflavin biosynthesis protein [Pseudoalteromonas haloplanktis
           TAC125]
 gi|76876201|emb|CAI87423.1| Riboflavin biosynthesis protein [Pseudoalteromonas haloplanktis
           TAC125]
          Length = 382

 Score =  105 bits (263), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 36/153 (23%), Positives = 59/153 (38%), Gaps = 23/153 (15%)

Query: 4   GNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
             ++M+ A+E A+        P   VG V V NN+I+    ++         HAE+ A+ 
Sbjct: 11  DEMYMARAIELAKKGRFTT-TPNPNVGCVLVKNNEIVGEGFHQLAGQG----HAEVNALA 65

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           M               YVTLEPC        CA  +  A + ++     +        G 
Sbjct: 66  MAGSKA-----KGATAYVTLEPCSHYGRTPPCAEGLKAAGVVKVIAAMVDSNPQVAGKGL 120

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
           +  + A      E+  G+ E ++R +   FFK 
Sbjct: 121 KILSDAG----IEVAYGLLEAQARALNLGFFKR 149


>gi|254468535|ref|ZP_05081941.1| riboflavin biosynthesis protein RibD [beta proteobacterium KB13]
 gi|207087345|gb|EDZ64628.1| riboflavin biosynthesis protein RibD [beta proteobacterium KB13]
          Length = 363

 Score =  105 bits (263), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 43/154 (27%), Positives = 71/154 (46%), Gaps = 19/154 (12%)

Query: 2   KKGNVFMSCALEEAQNAALR-NEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
           K    FM+ A++ A+    + N  P VGAV V+++KII+   ++  E      HAE++AI
Sbjct: 5   KLDFFFMAQAIKLAKKGLGQCNPNPIVGAVIVVDDKIIATGYHQ--EFGGP--HAEVVAI 60

Query: 60  RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113
                   + +L +  L+VTLEPC        C   I    I+R+   + +P      NG
Sbjct: 61  HN---CKDKALLKKSTLFVTLEPCAHEGKTPPCLDLILKHDIKRVVIASQDPNPKV--NG 115

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
               +L       E+  G+ E ++  + + FFK 
Sbjct: 116 ISIKSL--IEKGVEVDVGLMEDQAFNLNKGFFKR 147


>gi|326573500|gb|EGE23466.1| riboflavin biosynthesis protein RibD [Moraxella catarrhalis O35E]
          Length = 350

 Score =  105 bits (263), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 36/157 (22%), Positives = 62/157 (39%), Gaps = 18/157 (11%)

Query: 1   MKKGNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           +++   +M  A+  A+      R    VG V V ++ +I +  +     K    HAEI A
Sbjct: 7   IQQDIYYMQLAIAAAKKGIYTTRPNPAVGCVLVKDSLVIGQGYH----PKAGQPHAEIFA 62

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
           +                 YVTLEPC        CA A+  A ++R+   + +P      N
Sbjct: 63  L--ADAKAQGFDTKGATAYVTLEPCSHTGRTPPCADALIAADLKRVVIASLDPNPKVAGN 120

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
           G +       +   E+  G+ +Q++  +   F K  R
Sbjct: 121 GIKKLQ----NAGIEVLVGVCDQQAAALNLGFLKAMR 153


>gi|228922109|ref|ZP_04085419.1| Riboflavin biosynthesis protein [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
 gi|228837525|gb|EEM82856.1| Riboflavin biosynthesis protein [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
          Length = 360

 Score =  105 bits (263), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 43/146 (29%), Positives = 63/146 (43%), Gaps = 23/146 (15%)

Query: 8   MSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           M  ALE A  A      P   VG+V V +N+I+    +          HAEI AIRM   
Sbjct: 1   MKLALENA-KAMKGQTTPNPLVGSVIVNDNRIVGVGAHMKAGE----PHAEIHAIRMA-- 53

Query: 65  ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
              +E      +YVTLEPC+       CA AI  A I+++     +P       G +   
Sbjct: 54  ---EEQARGGTIYVTLEPCSHHGRTGPCAEAIVQAGIKKVVVATLDPNPLVSGRGIKILQ 110

Query: 119 LATCHHSPEIYPGISEQRSRQIIQDF 144
            A      E+  G+ E+ S+++ + F
Sbjct: 111 DAG----IEVLVGVCEEESKKMNEVF 132


>gi|260914242|ref|ZP_05920715.1| riboflavin biosynthesis protein RibD [Pasteurella dagmatis ATCC
           43325]
 gi|260631875|gb|EEX50053.1| riboflavin biosynthesis protein RibD [Pasteurella dagmatis ATCC
           43325]
          Length = 377

 Score =  105 bits (263), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 38/155 (24%), Positives = 58/155 (37%), Gaps = 21/155 (13%)

Query: 3   KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +  VFM  AL+ AQ         P VG V V +  I+ +  +          HAE++A+R
Sbjct: 7   QDAVFMQMALDLAQQGQFTTTPNPSVGCVLVKDGSIVGKGFHFKAGE----PHAEVMALR 62

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
                   E       YVTLEPC        CA  +  A + R+     +P       G 
Sbjct: 63  DAG-----EQAKGATAYVTLEPCSHFGRTPPCAKGLIEAGVARVVSAMRDPNPQVAGKGL 117

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
           Q         +     G+ E+++  + + F K  R
Sbjct: 118 QMLAEQGIESAV----GLLEEKAEWLNRGFLKRMR 148


>gi|295096804|emb|CBK85894.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase
           /5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Enterobacter cloacae subsp. cloacae NCTC 9394]
          Length = 367

 Score =  105 bits (263), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 35/154 (22%), Positives = 57/154 (37%), Gaps = 21/154 (13%)

Query: 4   GNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
             ++M+ A++ AQ      +  P VG V V + +I+    +          HAE+ A+RM
Sbjct: 3   DEMYMARAMKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGFHYRAGE----PHAEVHALRM 58

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
                          YVTLEPC        C  A+  A + R+     +P    +  G  
Sbjct: 59  AGEKA-----RGATAYVTLEPCSHHGRTPPCCEALIAAGVSRVVAAMQDPNPQVVGRGLY 113

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
                      ++  G+  Q +  I + F K  R
Sbjct: 114 RLQQEG----IDVSHGLMMQDAENINKGFLKRMR 143


>gi|292492824|ref|YP_003528263.1| riboflavin biosynthesis protein RibD [Nitrosococcus halophilus Nc4]
 gi|291581419|gb|ADE15876.1| riboflavin biosynthesis protein RibD [Nitrosococcus halophilus Nc4]
          Length = 373

 Score =  105 bits (263), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 33/158 (20%), Positives = 58/158 (36%), Gaps = 23/158 (14%)

Query: 1   MKK--GNVFMSCALEEAQNAA-LRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56
           M++     +M+ AL+ A       +  P VG V V   +I+    ++        AHAE+
Sbjct: 1   MEQVNDRAYMARALKLAWRGLFTTDPNPRVGCVLVRAGEIVGEGWHQWAGD----AHAEV 56

Query: 57  LAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGI 110
            A+R                YVTLEPC        C  A+  A + R+     +P     
Sbjct: 57  NALRQA-----DVRARGATCYVTLEPCCHRGRTPPCTEALIEAGVVRVVAAMRDPNPKVA 111

Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKER 148
             G      A      ++  G+ ++ ++ +   F +  
Sbjct: 112 GQGLAQLREAGL----QVEYGLLQEEAQALNPGFVQRL 145


>gi|194016088|ref|ZP_03054703.1| riboflavin biosynthesis protein RibD [Bacillus pumilus ATCC 7061]
 gi|194012443|gb|EDW22010.1| riboflavin biosynthesis protein RibD [Bacillus pumilus ATCC 7061]
          Length = 361

 Score =  105 bits (263), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 40/155 (25%), Positives = 61/155 (39%), Gaps = 25/155 (16%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56
           MK    +M  A+  A+  A++ +    P VGAV V   +I+    +          HAEI
Sbjct: 1   MKDDVFYMKLAIANAK--AMKGQTSPNPLVGAVIVQQGEIVGMGAHMKAGE----PHAEI 54

Query: 57  LAIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGI 110
            A+ M              LYVTLEPC+       C  AI  + ++R+     +P     
Sbjct: 55  HALHMAGEKA-----EGAHLYVTLEPCSHHGKTGPCTEAIIKSGVKRVVIATQDPNPLVA 109

Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
             G      A      E+  GI +Q + ++   FF
Sbjct: 110 GKGITVLKQAG----IEVDEGICKQEADRLNVPFF 140


>gi|297804068|ref|XP_002869918.1| cytidine/deoxycytidylate deaminase family protein [Arabidopsis
           lyrata subsp. lyrata]
 gi|297315754|gb|EFH46177.1| cytidine/deoxycytidylate deaminase family protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 426

 Score =  105 bits (263), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 33/150 (22%), Positives = 61/150 (40%), Gaps = 21/150 (14%)

Query: 3   KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
             + +M   +E A+ A    +  P VG V V +  I+ +  +     K    HAE+ A+R
Sbjct: 73  DDSFYMRKCVELAKRAIGCTSPNPMVGCVIVKDGDIVGQGFH----PKAGQPHAEVFALR 128

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
               +           YV+LEPC        C  A+  A+++R+  G  +P      +G 
Sbjct: 129 DAGELAEN-----ATAYVSLEPCNHYGRTPPCTEALIKAKVKRVVVGMVDPNPIVSSSGI 183

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
                A      ++  G+ E+  +++ + F
Sbjct: 184 SRLKDAG----IDVTVGVEEELCKKMNEGF 209


>gi|229071616|ref|ZP_04204834.1| RibD (Riboflavin-specific deaminase) [Bacillus cereus F65185]
 gi|228711552|gb|EEL63509.1| RibD (Riboflavin-specific deaminase) [Bacillus cereus F65185]
          Length = 379

 Score =  105 bits (263), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 35/158 (22%), Positives = 62/158 (39%), Gaps = 24/158 (15%)

Query: 3   KGNVFMSCALEEAQ-NAALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
               +M  AL+ A+  +   +  P VGAV V +  I+    +     +    HAE+ A++
Sbjct: 11  TDQEYMRIALQLAEGTSGQTSPNPMVGAVVVKDGNIVGMGAHLRAGEE----HAEVHALQ 66

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           M  +        +  +YVTLEPC        C   +    ++R+     +       NG 
Sbjct: 67  MAGQ-----NAKDATVYVTLEPCSHFGKTPPCCELLIERGVKRVVIATLDCNPLVSGNGK 121

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF---KERR 149
           +    A      E+  G+ E  +  + + FF   K +R
Sbjct: 122 RRLEEA----RIEVTTGVLEADAVLLNRYFFHYMKTKR 155


>gi|24374975|ref|NP_719018.1| riboflavin biosynthesis protein RibD [Shewanella oneidensis MR-1]
 gi|24349701|gb|AAN56462.1|AE015783_5 riboflavin biosynthesis protein RibD [Shewanella oneidensis MR-1]
          Length = 381

 Score =  105 bits (263), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 36/152 (23%), Positives = 57/152 (37%), Gaps = 21/152 (13%)

Query: 4   GNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
            N  MS A++ A+      R    VG V V +N+I+    ++         HAE+ A+RM
Sbjct: 7   DNQMMSRAIQLARKGFYTTRPNPSVGCVIVNDNQIVGEGYHQKAGE----PHAEVHALRM 62

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
              +           YVTLEPC        CA A+    ++R+     +P       G Q
Sbjct: 63  AGELA-----RGATAYVTLEPCSHYGRTPPCALALINIGVKRVVVAVEDPNPQVGGRGIQ 117

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
               A      ++  G+    +  +   F K 
Sbjct: 118 MLRDAG----IQVDVGLHRDEAYALNLGFMKR 145


>gi|144897824|emb|CAM74688.1| Riboflavin biosynthesis protein [Magnetospirillum gryphiswaldense
           MSR-1]
          Length = 370

 Score =  105 bits (263), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 34/151 (22%), Positives = 52/151 (34%), Gaps = 25/151 (16%)

Query: 4   GNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
               M  AL  A+       +   P VG V V + +++ R   +         HAE  A+
Sbjct: 10  DRAHMRAALALAKRGL--GNVWPNPAVGCVIVADGRVVGRGWTQPGGR----PHAETEAL 63

Query: 60  RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113
            M   +           YVTLEPC        CA A+  A IRR+     +P       G
Sbjct: 64  AMAGALA-----RGGTAYVTLEPCSHHGKTPPCAEALVAAGIRRVVVAIQDPDPRVAGRG 118

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
                 A       +  G+  + + ++   F
Sbjct: 119 IALLQAAGL----SVVTGVMAEEAAELNAGF 145


>gi|46579612|ref|YP_010420.1| riboflavin biosynthesis protein RibD [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|46449027|gb|AAS95679.1| riboflavin biosynthesis protein RibD [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|311233416|gb|ADP86270.1| riboflavin biosynthesis protein RibD [Desulfovibrio vulgaris RCH1]
          Length = 377

 Score =  105 bits (263), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 36/146 (24%), Positives = 55/146 (37%), Gaps = 19/146 (13%)

Query: 7   FMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           FM  A+  A+           VGAV V + ++ +R  +          HAE+  +R    
Sbjct: 8   FMREAIALAERGRWYAAPNPTVGAVLVRDGEVAARGWHTGYGK----PHAEVECLRDAAS 63

Query: 65  ILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
                      L VTLEPC        C+ AI  A I R+  G ++P       G ++  
Sbjct: 64  KGVDP--AHCTLVVTLEPCNHHGKTPPCSHAIVEAGITRVVVGLADPNPVASG-GAEYLR 120

Query: 119 LATCHHSPEIYPGISEQRSRQIIQDF 144
                H   +  G+ EQ    ++ DF
Sbjct: 121 A----HGVTVDMGVCEQECHDLVADF 142


>gi|42783225|ref|NP_980472.1| riboflavin biosynthesis protein RibD [Bacillus cereus ATCC 10987]
 gi|42739153|gb|AAS43080.1| riboflavin biosynthesis protein RibD [Bacillus cereus ATCC 10987]
          Length = 370

 Score =  105 bits (263), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 35/158 (22%), Positives = 59/158 (37%), Gaps = 24/158 (15%)

Query: 3   KGNVFMSCALEEAQ-NAALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
               +M  AL+ A+  +   +  P VGAV V +  I+    +     +    HAE+ A+ 
Sbjct: 2   TDQEYMRIALQLAEGTSGQTSPNPMVGAVVVKDGNIVGMGAHLRAGEE----HAEVYALH 57

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           M              +YVTLEPC        C   +    ++R+     +       NG 
Sbjct: 58  MAGEKA-----KGATVYVTLEPCSHFGKTPPCCELLIKKGVKRVVIATLDCNPLVSGNGK 112

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF---KERR 149
           +    A      E+  G+ E  +  + + FF   K +R
Sbjct: 113 RKLEEAG----IEVTTGVLEAEAILLNRYFFHYMKTKR 146


>gi|282889950|ref|ZP_06298485.1| hypothetical protein pah_c008o037 [Parachlamydia acanthamoebae str.
           Hall's coccus]
 gi|281500143|gb|EFB42427.1| hypothetical protein pah_c008o037 [Parachlamydia acanthamoebae str.
           Hall's coccus]
          Length = 359

 Score =  105 bits (263), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 42/151 (27%), Positives = 59/151 (39%), Gaps = 24/151 (15%)

Query: 8   MSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           M  AL  A  A L    P   VGAV V   KI+              AHAEI+A+R    
Sbjct: 1   MDRALALATQARLL-SPPNPWVGAVIVKQGKIVGEGF----TQAPGEAHAEIMALRQALH 55

Query: 65  ILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
                      LYVTLEPC        C  AI  A+I  +     +P       G Q   
Sbjct: 56  QAEN-----STLYVTLEPCSHFGKTPPCVNAIIQAKIAHVVIALEDPDPQVSGRGIQKLK 110

Query: 119 LATCHHSPEIYPGISEQRSRQIIQDF-FKER 148
            A       +  G+ +QR+ ++++ + F+ +
Sbjct: 111 EAG----ISVTVGVEQQRATELLEPYLFQRK 137


>gi|254521581|ref|ZP_05133636.1| cytosine deaminase [Stenotrophomonas sp. SKA14]
 gi|219719172|gb|EED37697.1| cytosine deaminase [Stenotrophomonas sp. SKA14]
          Length = 150

 Score =  105 bits (263), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 32/151 (21%), Positives = 52/151 (34%), Gaps = 21/151 (13%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRM 61
                +  A+ EA+       +P+GA     + +++    NR  +  D + H E  A R 
Sbjct: 6   DYQALLQTAIAEARQGLAEGGVPIGAALYHNDGRLLGCGHNRRVQEGDPSVHGETDAFRK 65

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI----ENGTQFY 117
             R   Q    +  +  TL PC  C+  +    I  +  G S    GGI    ENG    
Sbjct: 66  AGR---QRRYQDTIMVTTLAPCWYCSGLVRQFNIGTVVVGESRTFQGGIAWLRENGVNVI 122

Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDFFKER 148
            L +             Q    ++  F  + 
Sbjct: 123 DLDS-------------QECVDLLGGFIAQH 140


>gi|291295639|ref|YP_003507037.1| riboflavin biosynthesis protein RibD [Meiothermus ruber DSM 1279]
 gi|290470598|gb|ADD28017.1| riboflavin biosynthesis protein RibD [Meiothermus ruber DSM 1279]
          Length = 384

 Score =  105 bits (263), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 35/155 (22%), Positives = 56/155 (36%), Gaps = 24/155 (15%)

Query: 4   GNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
              ++  AL+ A+        P   VGAV V N +I+    +          HAE+ A+ 
Sbjct: 11  DERYLRRALQLAERGRGHT-HPNPLVGAVLVKNGRIVGEGYHPRAGE----PHAEVFALH 65

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
                   E      LYV+LEPC        C+ A+  A + R+   A +P         
Sbjct: 66  QAG-----EEAQGATLYVSLEPCDHHGRTPPCSLALLEAGVGRVVVAARDPNPKAQGGLE 120

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
           +  +         +  G+ E  +R   + FF   R
Sbjct: 121 RLRSA-----GVAVELGLLEAEARAQNEVFFHALR 150


>gi|242374059|ref|ZP_04819633.1| possible diaminohydroxyphosphoribosylaminopyrimidine deaminase
           [Staphylococcus epidermidis M23864:W1]
 gi|242348184|gb|EES39786.1| possible diaminohydroxyphosphoribosylaminopyrimidine deaminase
           [Staphylococcus epidermidis M23864:W1]
          Length = 347

 Score =  105 bits (263), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 36/151 (23%), Positives = 65/151 (43%), Gaps = 24/151 (15%)

Query: 7   FMSCALEEAQNAALRNEI--PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           FM+ A++ AQ    +  I  PVG+V V + +I+    +  +  K    HAE+ A+ M  +
Sbjct: 4   FMNYAIQLAQMVDGQTGINPPVGSVVVKDGRIVGLGAHLKKGDK----HAEVQALDMAGQ 59

Query: 65  ILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
                   +  +YV+LEPC        C   I    I+++ Y   +     +  G +   
Sbjct: 60  AA-----KDATIYVSLEPCTHHGSTPPCVDKIIEFGIKKVIYAIKDTTL--VSKGDEILK 112

Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
            A      E+    +E  + ++ +DFF  +R
Sbjct: 113 EAG----IEVEFQFNED-AAELYKDFFPAKR 138


>gi|169797510|ref|YP_001715303.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Acinetobacter baumannii AYE]
 gi|213155676|ref|YP_002317721.1| riboflavin biosynthesis protein RibD [Acinetobacter baumannii
           AB0057]
 gi|215484945|ref|YP_002327186.1| riboflavin biosynthesis protein RibD [Acinetobacter baumannii
           AB307-0294]
 gi|301346214|ref|ZP_07226955.1| riboflavin biosynthesis protein RibD [Acinetobacter baumannii
           AB056]
 gi|301512963|ref|ZP_07238200.1| riboflavin biosynthesis protein RibD [Acinetobacter baumannii
           AB058]
 gi|301595094|ref|ZP_07240102.1| riboflavin biosynthesis protein RibD [Acinetobacter baumannii
           AB059]
 gi|332851510|ref|ZP_08433507.1| riboflavin biosynthesis protein RibD [Acinetobacter baumannii
           6013150]
 gi|332866790|ref|ZP_08437194.1| riboflavin biosynthesis protein RibD [Acinetobacter baumannii
           6013113]
 gi|169150437|emb|CAM88334.1| bifunctional protein [Includes:
           diaminohydroxyphosphoribosylaminopyrimidine deaminase
           (Riboflavin-specific deaminase);
           5-amino-6-(5-phosphoribosylamino)uracil reductase (HTP
           reductase) ] [Acinetobacter baumannii AYE]
 gi|213054836|gb|ACJ39738.1| riboflavin biosynthesis protein RibD [Acinetobacter baumannii
           AB0057]
 gi|213986529|gb|ACJ56828.1| riboflavin biosynthesis protein RibD [Acinetobacter baumannii
           AB307-0294]
 gi|332729963|gb|EGJ61294.1| riboflavin biosynthesis protein RibD [Acinetobacter baumannii
           6013150]
 gi|332734398|gb|EGJ65518.1| riboflavin biosynthesis protein RibD [Acinetobacter baumannii
           6013113]
          Length = 361

 Score =  105 bits (263), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 40/155 (25%), Positives = 62/155 (40%), Gaps = 21/155 (13%)

Query: 1   MKKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           +K+   +M  A+E A+         P VG V V +N++I    +     K    HAE+ A
Sbjct: 4   LKQDQYWMQQAIELAKRGLYSTKPNPNVGCVIVKDNQVIGEGFH----PKAGQPHAEVFA 59

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
           +R                YVTLEPC        CA A+  A+++++     +P       
Sbjct: 60  LRQAGEQAQ-----GATAYVTLEPCAHYGRTPPCAEALVKAQVKKVVVACPDPNPLVAGK 114

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
           G Q       +   E+  GI E  + Q+ Q F K 
Sbjct: 115 GVQILK----NAGIEVEIGICEDLAAQLNQGFLKA 145


>gi|217961603|ref|YP_002340173.1| riboflavin biosynthesis protein RibD [Bacillus cereus AH187]
 gi|222097559|ref|YP_002531616.1| riboflavin biosynthesis protein ribd [Bacillus cereus Q1]
 gi|217063616|gb|ACJ77866.1| riboflavin biosynthesis protein RibD [Bacillus cereus AH187]
 gi|221241617|gb|ACM14327.1| riboflavin biosynthesis protein RibD [Bacillus cereus Q1]
          Length = 370

 Score =  105 bits (263), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 35/158 (22%), Positives = 60/158 (37%), Gaps = 24/158 (15%)

Query: 3   KGNVFMSCALEEAQ-NAALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
               +M  AL+ A+  +   +  P VGAV V +  I+    +     +    HAE+ A+ 
Sbjct: 2   TDQEYMRIALQLAEGTSGQTSPNPMVGAVVVKDGNIVGMGAHLRAGEE----HAEVHALH 57

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           M              +YVTLEPC        C   +    ++R+     +       NG 
Sbjct: 58  MAGDKA-----KGATVYVTLEPCSHFGKTPPCCELLIKKEVKRVVIATLDCNPLVSGNGK 112

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF---KERR 149
           +    A      E+  G+ E+ +  + + FF   K +R
Sbjct: 113 KRLEEAG----IEVTTGVLEEEAVLLNRYFFHYMKTKR 146


>gi|184201786|ref|YP_001855993.1| guanine deaminase [Kocuria rhizophila DC2201]
 gi|183582016|dbj|BAG30487.1| guanine deaminase [Kocuria rhizophila DC2201]
          Length = 170

 Score =  105 bits (263), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 31/82 (37%), Positives = 41/82 (50%)

Query: 22  NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81
           +  P GA+ V  +     A NR     D TAHAE+ AIR  C  L    L    LY + E
Sbjct: 34  DGGPFGALLVTADGREFTAVNRVTADNDPTAHAEVCAIRAACSALGTHDLGGATLYSSCE 93

Query: 82  PCTMCAAAISLARIRRLYYGAS 103
           PC MC +A   AR+ R+++ A 
Sbjct: 94  PCPMCLSAALWARLDRVFFAAD 115


>gi|119356772|ref|YP_911416.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase /
           diaminohydroxyphosphoribosylaminopyrimidine deaminase
           [Chlorobium phaeobacteroides DSM 266]
 gi|119354121|gb|ABL64992.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase /
           diaminohydroxyphosphoribosylaminopyrimidine deaminase
           [Chlorobium phaeobacteroides DSM 266]
          Length = 366

 Score =  104 bits (262), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 38/155 (24%), Positives = 60/155 (38%), Gaps = 23/155 (14%)

Query: 2   KKGNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57
           +    +M+   E A        +   P VG+V V N +I+    +          HAE+ 
Sbjct: 4   ESHEWYMNRCFELALQG--SGMVSPNPMVGSVIVHNGEIVGEGYHERFGG----PHAEVH 57

Query: 58  AIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIE 111
           AI     + + E+L    LYV LEPC        CA  I   RI R+  G  +P      
Sbjct: 58  AI---ASVGNAEVLQNSTLYVNLEPCSHFGKTPPCADLILAKRIPRVVIGCRDPHEKVAG 114

Query: 112 NGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
            G +  T A      ++  G+    + ++ + F K
Sbjct: 115 KGIERLTAAG----VQVTEGVLMPEALKLNEAFIK 145


>gi|260910408|ref|ZP_05917080.1| riboflavin biosynthesis protein RibD [Prevotella sp. oral taxon 472
           str. F0295]
 gi|260635484|gb|EEX53502.1| riboflavin biosynthesis protein RibD [Prevotella sp. oral taxon 472
           str. F0295]
          Length = 351

 Score =  104 bits (262), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 40/160 (25%), Positives = 63/160 (39%), Gaps = 22/160 (13%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
                +M   L+ A+   L    P   VGAV V  ++II    +    +     HAE+ A
Sbjct: 48  TTDERYMRRCLQLARCGLL-GAKPNPMVGAVIVYRDRIIGEGYH----VHCGEGHAEVNA 102

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
                R   + +LP+  LYV+LEPC        CA  I    + R+  G  +P       
Sbjct: 103 F-AAVRPEDESLLPQSTLYVSLEPCSHYGKTPPCADLIIRKEVARVVVGCIDPFAKVQGR 161

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF---KERR 149
           G +    A      E+  G+ E+    + + F    +E+R
Sbjct: 162 GIEKLRRAG----IEVVVGVLEKECLALNRHFIVFQREQR 197


>gi|296114110|ref|YP_003628048.1| riboflavin biosynthesis protein RibD [Moraxella catarrhalis RH4]
 gi|295921804|gb|ADG62155.1| riboflavin biosynthesis protein RibD [Moraxella catarrhalis RH4]
          Length = 350

 Score =  104 bits (262), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 37/157 (23%), Positives = 62/157 (39%), Gaps = 18/157 (11%)

Query: 1   MKKGNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           +++   +M  A+  A+      R    VG V V ++ +I +  +     K    HAEI A
Sbjct: 7   IQQDIYYMQLAIAAAKKGIYTTRPNPAVGCVLVKDSLVIGQGYH----PKAGQPHAEIFA 62

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
           +                 YVTLEPC        CA A+  A +RR+   + +P      N
Sbjct: 63  L--ADAKAQGFDTKGATAYVTLEPCSHTGRTPPCADALIAANLRRVVVASLDPNPKVAGN 120

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
           G +       +   E+  G+ +Q++  +   F K  R
Sbjct: 121 GIKKLQ----NAGIEVLVGVCDQQAAALNLGFLKAMR 153


>gi|196038826|ref|ZP_03106134.1| riboflavin biosynthesis protein RibD [Bacillus cereus NVH0597-99]
 gi|196030549|gb|EDX69148.1| riboflavin biosynthesis protein RibD [Bacillus cereus NVH0597-99]
          Length = 370

 Score =  104 bits (262), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 35/158 (22%), Positives = 55/158 (34%), Gaps = 24/158 (15%)

Query: 3   KGNVFMSCALEEAQN--AALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
               +M  AL+ A+           VGAV V +  I+    +     +    HAE+ A+ 
Sbjct: 2   TDQEYMRIALQLAEGTCGQTSPNPMVGAVVVKDGNIVGMGAHLRAGEE----HAEVHALH 57

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           M              +YVTLEPC        C   +    I R+     +       NG 
Sbjct: 58  MAGDKA-----KGATVYVTLEPCSHFGKTPPCCDLLIKKGITRVVIATLDCNPLVSGNGK 112

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF---KERR 149
           +    A      E+  G+ E  +  + + FF   K +R
Sbjct: 113 RKLEEAG----IEVTTGVLEAEAVLLNRYFFHYMKTKR 146


>gi|229140846|ref|ZP_04269391.1| RibD (Riboflavin-specific deaminase) [Bacillus cereus BDRD-ST26]
 gi|228642636|gb|EEK98922.1| RibD (Riboflavin-specific deaminase) [Bacillus cereus BDRD-ST26]
          Length = 379

 Score =  104 bits (262), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 35/158 (22%), Positives = 60/158 (37%), Gaps = 24/158 (15%)

Query: 3   KGNVFMSCALEEAQ-NAALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
               +M  AL+ A+  +   +  P VGAV V +  I+    +     +    HAE+ A+ 
Sbjct: 11  TDQEYMRIALQLAEGTSGQTSPNPMVGAVVVKDGNIVGMGAHLRAGEE----HAEVHALH 66

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           M              +YVTLEPC        C   +    ++R+     +       NG 
Sbjct: 67  MAGDKA-----KGATVYVTLEPCSHFGKTPPCCELLIKKEVKRVVIATLDCNPLVSGNGK 121

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF---KERR 149
           +    A      E+  G+ E+ +  + + FF   K +R
Sbjct: 122 KRLEEAG----IEVTTGVLEEEAVLLNRYFFHYMKTKR 155


>gi|227824644|ref|ZP_03989476.1| riboflavin biosynthesis protein ribD [Acidaminococcus sp. D21]
 gi|226905143|gb|EEH91061.1| riboflavin biosynthesis protein ribD [Acidaminococcus sp. D21]
          Length = 366

 Score =  104 bits (262), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 33/151 (21%), Positives = 56/151 (37%), Gaps = 22/151 (14%)

Query: 3   KGNVFMSCALEEAQNAALRNEI-P-VGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAI 59
               +M  AL+ A+ A       P VG V V  +  ++ +  +          HAEI A+
Sbjct: 2   TDEEYMQMALDLAEKARGATSPNPLVGCVIVSPDGHVVGKGYHHKAGE----PHAEINAM 57

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENG 113
                            YVTLEPC+       C  A+  A I+++   A++P       G
Sbjct: 58  DDAGEKT-----AGATAYVTLEPCSHYGRTGPCCEALIKAGIKKVVAAATDPNPRVSGRG 112

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
            +    A      E+  G+   ++ +  + F
Sbjct: 113 FRRLEEAG----VEVVSGVLADKAYRQNEIF 139


>gi|91776267|ref|YP_546023.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Methylobacillus flagellatus KT]
 gi|91710254|gb|ABE50182.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Methylobacillus flagellatus KT]
          Length = 377

 Score =  104 bits (262), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 39/153 (25%), Positives = 62/153 (40%), Gaps = 21/153 (13%)

Query: 3   KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
             + +M+ AL EA       +  P VG V V + K++ R  +          HAE+ A+R
Sbjct: 15  SDHHYMNLALREAARGLYSTSPNPRVGCVIVKDGKVVGRGAHLRAGE----PHAEVHALR 70

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           M     +         YVTLEPC        CA A+  A +RR+     +P      +G 
Sbjct: 71  MAGGQAAGAD-----AYVTLEPCSHFGRTPPCADALVKAGVRRVVAAMQDPNPLVSGSGL 125

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
           +  +     H  E+  G+ E  +R++   F   
Sbjct: 126 KRLST----HGIEVAYGLLEHEARELNAGFISR 154


>gi|319651135|ref|ZP_08005268.1| riboflavin specific deaminase [Bacillus sp. 2_A_57_CT2]
 gi|317397189|gb|EFV77894.1| riboflavin specific deaminase [Bacillus sp. 2_A_57_CT2]
          Length = 365

 Score =  104 bits (262), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 42/153 (27%), Positives = 66/153 (43%), Gaps = 25/153 (16%)

Query: 3   KGNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
               +M  A+  A  AA + +    P VGAV V N +I+    +    LK  T HAE+ A
Sbjct: 2   NHQEYMELAISLA--AATKGQTSPNPQVGAVVVKNGEILGMGAH----LKAGTPHAEVHA 55

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
           I       + E     D+YVTLEPC        CA  I  + I R++  +++P       
Sbjct: 56  I-----AAAGEKAKGADIYVTLEPCSHFGRTPPCADLIINSGINRVFIASADPNPLVSGK 110

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
           G +    A      E+  G+ ++ +  + + FF
Sbjct: 111 GIERMQDAG----IEVVTGLLKEEADALNEPFF 139


>gi|239637909|ref|ZP_04678870.1| riboflavin biosynthesis protein RibD [Staphylococcus warneri
           L37603]
 gi|239596472|gb|EEQ79008.1| riboflavin biosynthesis protein RibD [Staphylococcus warneri
           L37603]
          Length = 347

 Score =  104 bits (262), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 40/157 (25%), Positives = 64/157 (40%), Gaps = 27/157 (17%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEI--PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           M K   FM+ A++ AQ    +  +  PVG+V V + +I+    +  +  K    HAE+ A
Sbjct: 1   MSK---FMNYAIQLAQMVDGQTGVNPPVGSVVVKDGRIVGIGAHLRKGDK----HAEVQA 53

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
           + M      Q       +YV+LEPC        C   I  A I ++ Y   +     I  
Sbjct: 54  LDMA-----QSEANGATIYVSLEPCTHHGSTPPCVDKIIEAGIHKVIYAVKDTTL--ISK 106

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
           G         +   E+    +   + Q+ QDFF  +R
Sbjct: 107 GDDILK----NAGIEVEFQYNA-VAAQLYQDFFTAKR 138


>gi|325680426|ref|ZP_08159976.1| riboflavin biosynthesis protein RibD [Ruminococcus albus 8]
 gi|324107864|gb|EGC02130.1| riboflavin biosynthesis protein RibD [Ruminococcus albus 8]
          Length = 369

 Score =  104 bits (262), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 44/154 (28%), Positives = 65/154 (42%), Gaps = 19/154 (12%)

Query: 1   MKKGNVFMSCALEEAQNAAL-RNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           M +   FM  AL+ A+N     N  P VGAV V + KII+   +        + HAE  A
Sbjct: 1   MDR-EDFMQAALDSAENGMGFVNPNPMVGAVIVRDGKIIASGFHERY----GSLHAERSA 55

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
                +          D+YVTLEPC        C  AI+   IR +Y G+S+P       
Sbjct: 56  FAQCNKKGIN--CAGADMYVTLEPCCHHGKQPPCTEAIAAHGIRHVYIGSSDPNPLVSGK 113

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
           G  F           +  G+ +++  ++ + FFK
Sbjct: 114 GAAFLRSRGIG----VTEGVLKEKCDKLNEIFFK 143


>gi|326561735|gb|EGE12070.1| riboflavin biosynthesis protein RibD [Moraxella catarrhalis 7169]
 gi|326569043|gb|EGE19112.1| riboflavin biosynthesis protein RibD [Moraxella catarrhalis BC1]
          Length = 350

 Score =  104 bits (262), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 37/157 (23%), Positives = 62/157 (39%), Gaps = 18/157 (11%)

Query: 1   MKKGNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           +++   +M  A+  A+      R    VG V V ++ +I +  +     K    HAEI A
Sbjct: 7   IQQDIYYMQLAIAAAKKGIYTTRPNPAVGCVLVKDSLVIGQGYH----PKAGQPHAEIFA 62

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
           +                 YVTLEPC        CA A+  A +RR+   + +P      N
Sbjct: 63  L--ADAKAQGFDTKGATAYVTLEPCSHTGRTPPCADALIAANLRRVVVASLDPNPKVAGN 120

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
           G +       +   E+  G+ +Q++  +   F K  R
Sbjct: 121 GIKKLQ----NAGIEVLVGVCDQQAAALNLGFLKAMR 153


>gi|304407004|ref|ZP_07388658.1| riboflavin biosynthesis protein RibD [Paenibacillus curdlanolyticus
           YK9]
 gi|304343991|gb|EFM09831.1| riboflavin biosynthesis protein RibD [Paenibacillus curdlanolyticus
           YK9]
          Length = 373

 Score =  104 bits (262), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 39/151 (25%), Positives = 57/151 (37%), Gaps = 22/151 (14%)

Query: 3   KGNVFMSCALEEAQNAALRNEI-PV-GAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
               +M  AL+ AQ A  +  I PV G V V   +II    +  R       HAE+ A+R
Sbjct: 6   NDAFYMRLALQMAQGATGQTSINPVVGCVIVKEGRIIGMGAHLKRGEG----HAEVNALR 61

Query: 61  MGCRILSQEILPEVDLYVTLEPC-------TMCAAAISLARIRRLYYGASNPKGGGIENG 113
           M       +       YVTLEPC         C   +  ARI R+   A +P       G
Sbjct: 62  MAG-----DEAEGATAYVTLEPCSHYRKKTPPCCDRLIEARIARVVVAAQDPNPQVAGTG 116

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
            +    A       +  G+  + S  + + +
Sbjct: 117 VEKLRAAG----IAVSVGLLAEESHAMNERY 143


>gi|251795232|ref|YP_003009963.1| CMP/dCMP deaminase zinc-binding [Paenibacillus sp. JDR-2]
 gi|247542858|gb|ACS99876.1| CMP/dCMP deaminase zinc-binding [Paenibacillus sp. JDR-2]
          Length = 159

 Score =  104 bits (262), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 27/107 (25%), Positives = 44/107 (41%), Gaps = 2/107 (1%)

Query: 1   MKKGN-VFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILA 58
           MK+ +  ++   +E ++ +      P GA+ V    +I+    N     K  T HAE   
Sbjct: 1   MKQDHAYYLKYCIEVSRRSRENGNTPFGAILVNEQGEIVLEQENVELTEKRCTGHAETAL 60

Query: 59  IRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNP 105
           +           L    LY T EPC MC+ AI    + ++ Y A+  
Sbjct: 61  MEKASHQFEHHDLWNYTLYTTFEPCAMCSGAIYWGNVGKVVYAATEE 107


>gi|83941150|ref|ZP_00953612.1| riboflavin biosynthesis protein RibD [Sulfitobacter sp. EE-36]
 gi|83846970|gb|EAP84845.1| riboflavin biosynthesis protein RibD [Sulfitobacter sp. EE-36]
          Length = 367

 Score =  104 bits (262), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 36/155 (23%), Positives = 53/155 (34%), Gaps = 25/155 (16%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56
           M     FM+ AL   +    +  +   P VG V V   +I+ R   +         HAE 
Sbjct: 1   MSDDARFMALALSLGRRG--QGAVWPNPAVGCVIVQQGRIVGRGWTQPGGR----PHAEP 54

Query: 57  LAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGI 110
            A+R               +YVTLEPC        CA A+  A+  R+    ++      
Sbjct: 55  QALRQAGPAAQ-----GATVYVTLEPCAHTGKTPPCADALVAAKPARVVIACTDSDTRVS 109

Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
             G      A       +  G+ E  +R     FF
Sbjct: 110 GKGIAILRAAG----IIVDVGVLEDEARADHLGFF 140


>gi|33152274|ref|NP_873627.1| riboflavin biosynthesis protein RibD [Haemophilus ducreyi 35000HP]
 gi|33148497|gb|AAP96016.1| riboflavin-specific deaminase [Haemophilus ducreyi 35000HP]
          Length = 368

 Score =  104 bits (262), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 37/151 (24%), Positives = 58/151 (38%), Gaps = 21/151 (13%)

Query: 3   KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
               +M+ A+  A+ A    N  P VG V V N++II+   ++         HAE  AI 
Sbjct: 2   TDVDYMARAIALAEQARGWTNPNPLVGCVIVKNDQIIAEGYHQKVGE----WHAERNAI- 56

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
               +  Q+ L     YVTLEPC        C   +    I +++ G+ +P       G 
Sbjct: 57  ----LNCQQDLTGATAYVTLEPCCHHGRTPPCTDLLIERGINKVFVGSRDPNPLVTGKGI 112

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
           +    A      E+      +   Q+   FF
Sbjct: 113 KQLQAAG----IEVITDFMREACDQLNPIFF 139


>gi|218781151|ref|YP_002432469.1| riboflavin biosynthesis protein RibD [Desulfatibacillum
           alkenivorans AK-01]
 gi|218762535|gb|ACL05001.1| riboflavin biosynthesis protein RibD [Desulfatibacillum
           alkenivorans AK-01]
          Length = 372

 Score =  104 bits (262), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 37/157 (23%), Positives = 59/157 (37%), Gaps = 27/157 (17%)

Query: 2   KKGNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57
           K+   +M  AL  A+           P VGAV V + K+I +  ++         HAEI 
Sbjct: 3   KQDTQYMRQALALAEKG--TGNTSPNPMVGAVIVKDGKVIGQGWHKKAGG----PHAEIF 56

Query: 58  AIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIE 111
           A+                +YVTLEPC        C+ A+  A I ++     +P      
Sbjct: 57  ALEEAGA-----DAKGATMYVTLEPCNHHGKTPPCSHAVLKAGIAKVIAAIKDPNPKAQG 111

Query: 112 NGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKER 148
            G ++          E   G+ E  +R+   +FF + 
Sbjct: 112 -GLKYLQENG----VETQWGVCEAEARKQN-EFFIKH 142


>gi|152979034|ref|YP_001344663.1| riboflavin biosynthesis protein RibD [Actinobacillus succinogenes
           130Z]
 gi|150840757|gb|ABR74728.1| riboflavin biosynthesis protein RibD [Actinobacillus succinogenes
           130Z]
          Length = 375

 Score =  104 bits (262), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 35/156 (22%), Positives = 57/156 (36%), Gaps = 21/156 (13%)

Query: 2   KKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
           ++   +M  AL+ A+         P VG V V +NKI+    +          HAE++AI
Sbjct: 6   EQDQAYMQLALDLARRGRFTTTPNPNVGCVLVKHNKIVGTGFHFRAGE----PHAEVMAI 61

Query: 60  RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113
           R                YVTLEPC        CA  +  A + ++     +P       G
Sbjct: 62  RDAGDNTQ-----GATAYVTLEPCSHYGRTPPCAQGLINAGVTKVIIATQDPNPQVAGRG 116

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +    A    +     G+  +++  +   F K  R
Sbjct: 117 LKMLQDAGIESAV----GLLAEKAEAVNLGFLKRMR 148


>gi|282900583|ref|ZP_06308525.1| Riboflavin biosynthesis protein RibD [Cylindrospermopsis
           raciborskii CS-505]
 gi|281194383|gb|EFA69338.1| Riboflavin biosynthesis protein RibD [Cylindrospermopsis
           raciborskii CS-505]
          Length = 385

 Score =  104 bits (262), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 35/149 (23%), Positives = 59/149 (39%), Gaps = 21/149 (14%)

Query: 4   GNVFMSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
             + M   LE A+ A  R    P VGAV V + +I+    +          HAE+ A+R 
Sbjct: 17  DALMMQRCLELARLALGRTSPNPLVGAVVVKDGEIVGEGFHPRAGE----PHAEVFALRA 72

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
                  E      +YV+LEPC        C+ ++  A + ++  G  +P       G  
Sbjct: 73  AG-----ERARGATIYVSLEPCNHYGRTPPCSLSLINAGVAKVVVGMVDPNPLVAGAGIA 127

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDF 144
               A      E+  G+ E+  +++ + F
Sbjct: 128 RLRAAG----IEVIIGVEEEACQKLNEGF 152


>gi|330685448|gb|EGG97103.1| riboflavin biosynthesis protein RibD [Staphylococcus epidermidis
           VCU121]
          Length = 347

 Score =  104 bits (262), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 40/157 (25%), Positives = 65/157 (41%), Gaps = 27/157 (17%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEI--PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           M K   FM+ A++ AQ    +  +  PVG+V V + +I+    +  +  K    HAE+ A
Sbjct: 1   MSK---FMNYAIQLAQMVDGQTGVNPPVGSVVVKDGRIVGIGAHLRKGDK----HAEVQA 53

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
           + M      Q       +YV+LEPC        C   I  A I+++ Y   +     I  
Sbjct: 54  LDMA-----QSEAKGATIYVSLEPCTHHGSTPPCVDKIIEAGIQKVIYAVKDTTL--ISK 106

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
           G         +   E+    +   + Q+ QDFF  +R
Sbjct: 107 GDDILK----NAGIEVEFQYNA-VAAQLYQDFFTAKR 138


>gi|229013322|ref|ZP_04170462.1| RibD (Riboflavin-specific deaminase) [Bacillus mycoides DSM 2048]
 gi|228747915|gb|EEL97780.1| RibD (Riboflavin-specific deaminase) [Bacillus mycoides DSM 2048]
          Length = 379

 Score =  104 bits (262), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 36/158 (22%), Positives = 61/158 (38%), Gaps = 24/158 (15%)

Query: 3   KGNVFMSCALEEAQ-NAALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
               +M  AL+ AQ  +   +  P VGAV V + KI+    +     +    HAE+ A+ 
Sbjct: 11  TDQEYMRIALQLAQGTSGQTSPNPMVGAVVVKDGKIVGMGAHMRAGEE----HAEVHALH 66

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           M       E   +  +YVTLEPC        C   +    ++R+     +       NG 
Sbjct: 67  MAG-----ERAKDATVYVTLEPCSHFGKTPPCCELLIEKGVQRVVIATLDCNPLVSGNGK 121

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF---KERR 149
           +    A      ++  G+    +  + + FF   K +R
Sbjct: 122 RILEEAG----IKVTTGVLGAEATLLNRYFFHYMKTKR 155


>gi|157691490|ref|YP_001485952.1| bifunctional 5-amino-6-(5-phosphoribosylamino)uracil
           reductase/diaminohydroxyphosphoribosylaminopyrimidine
           deaminase [Bacillus pumilus SAFR-032]
 gi|157680248|gb|ABV61392.1| bifunctional 5-amino-6-(5-phosphoribosylamino)uracil
           reductase/diaminohydroxyphosphoribosylaminopyrimidine
           deaminase [Bacillus pumilus SAFR-032]
          Length = 361

 Score =  104 bits (262), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 41/155 (26%), Positives = 64/155 (41%), Gaps = 25/155 (16%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56
           MK    +M  A+  A+  A++ +    P VGAV V   +I+    +          HAEI
Sbjct: 1   MKDDVFYMELAIANAK--AMKGQTSPNPLVGAVIVQQGEIVGMGAHMKAGE----PHAEI 54

Query: 57  LAIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGI 110
            A++M      +E      LYVTLEPC+       C  AI  + ++R+     +P     
Sbjct: 55  HALQMA-----REKAKGAHLYVTLEPCSHYGKTGPCTEAIIKSGVKRVVIATQDPNPLVA 109

Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
             G      A      E+  GI +Q + ++   FF
Sbjct: 110 GKGMTMLKQAG----IEVDEGICKQEADRLNVPFF 140


>gi|312115805|ref|YP_004013401.1| CMP/dCMP deaminase zinc-binding protein [Rhodomicrobium vannielii
           ATCC 17100]
 gi|311220934|gb|ADP72302.1| CMP/dCMP deaminase zinc-binding protein [Rhodomicrobium vannielii
           ATCC 17100]
          Length = 212

 Score =  104 bits (262), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 40/142 (28%), Positives = 66/142 (46%), Gaps = 6/142 (4%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
               M   +E ++ A    + P GA+  L+ +I++ AGNR     D + HAEI+AI    
Sbjct: 8   DEAMMLRCIELSREATREGDYPFGALIALDGEIVAEAGNRAMRDADFSRHAEIIAIAAAL 67

Query: 64  RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT----- 118
           + + +  L    LY T+EPC MC+  I  A + R+ Y  ++P  GG+   T  +      
Sbjct: 68  KTVGRGGLARATLYSTVEPCAMCSFCIREAWVGRVAYALASPAMGGVSKWTILHDADLGR 127

Query: 119 -LATCHHSPEIYPGISEQRSRQ 139
            L     +PE+  G+    +  
Sbjct: 128 QLPIFGPAPEVVSGLLAGEALA 149


>gi|240949069|ref|ZP_04753420.1| riboflavin biosynthesis protein [Actinobacillus minor NM305]
 gi|240296542|gb|EER47167.1| riboflavin biosynthesis protein [Actinobacillus minor NM305]
          Length = 355

 Score =  104 bits (262), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 35/146 (23%), Positives = 56/146 (38%), Gaps = 21/146 (14%)

Query: 8   MSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M+ A+  A+ A    N  P VG V V N++I++   +          HAE  AI     +
Sbjct: 1   MARAIALAEKARGWTNPNPLVGCVIVKNDEILAEGYHERIGG----WHAERNAI-----L 51

Query: 66  LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
            S   L     YVTLEPC        C+  +    I +++ G+ +P       G +    
Sbjct: 52  NSNADLRGATAYVTLEPCCHHGRTPPCSDLLIERGISKVFIGSRDPNPLVSGKGVKQLQA 111

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFF 145
           A      E+      +   ++   FF
Sbjct: 112 AG----IEVVTDFMREECDRLNPIFF 133


>gi|301156580|emb|CBW16051.1| fused diaminohydroxyphosphoribosylaminopyrimidine deaminase and
           5-amino-6-(5-phosphoribosylamino) uracil reductase
           [Haemophilus parainfluenzae T3T1]
          Length = 376

 Score =  104 bits (262), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 34/155 (21%), Positives = 54/155 (34%), Gaps = 21/155 (13%)

Query: 3   KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
               FM  ALE A          P VG V V N +I+ +  +   +      HAE +A+ 
Sbjct: 8   DDVKFMQLALELAAKGQYTTTPNPSVGCVLVKNGEIVGKGFH--FKTGQP--HAERVALA 63

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
                           YVTLEPC        CA  +  A + R+    ++P       G 
Sbjct: 64  DAGEKA-----KGATAYVTLEPCSHYGRTPPCALGLIEAGVSRVVAAMADPNPQVAGKGL 118

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
           +    A    +      +  +++  + + F K  R
Sbjct: 119 KMLADAGIPSAVN----LLNEQAEALNKGFLKRMR 149


>gi|113475344|ref|YP_721405.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase /
           diaminohydroxyphosphoribosylaminopyrimidine deaminase
           [Trichodesmium erythraeum IMS101]
 gi|110166392|gb|ABG50932.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase /
           diaminohydroxyphosphoribosylaminopyrimidine deaminase
           [Trichodesmium erythraeum IMS101]
          Length = 374

 Score =  104 bits (262), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 35/151 (23%), Positives = 52/151 (34%), Gaps = 25/151 (16%)

Query: 4   GNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
             + M+  LE A+ A         P VG V + N +II    +          HAE+ A+
Sbjct: 14  DPLIMAHCLELARRAL--GNTAPNPLVGCVIIKNGQIIGEGFH----PGAGYPHAEVFAL 67

Query: 60  RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113
                            YV LEPC        C  A+  A + R+  G  +P       G
Sbjct: 68  TEAGEKA-----RGATAYVNLEPCNHYGRTPPCTDALIAAGVARVVIGMIDPNPLVAGAG 122

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
                 A      E+  G+ E   R++ + F
Sbjct: 123 VAKLQDAG----IEVVVGVLEAECRELNEAF 149


>gi|303238038|ref|ZP_07324581.1| riboflavin biosynthesis protein RibD [Prevotella disiens
           FB035-09AN]
 gi|302481828|gb|EFL44880.1| riboflavin biosynthesis protein RibD [Prevotella disiens
           FB035-09AN]
          Length = 335

 Score =  104 bits (262), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 40/152 (26%), Positives = 61/152 (40%), Gaps = 18/152 (11%)

Query: 2   KKGNVFMSCALEEAQNAALRN--EIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILA 58
            +  ++M   L+ A+N  L       VGAV V  + KII    +          HAE+ A
Sbjct: 7   DRDEMYMCRCLQLAKNGRLNAKPNPMVGAVIVSHDGKIIGEGYHVRCGEG----HAEVNA 62

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
                R   + +L E  +YV+LEPC        CA  I    +RR+  G  +P       
Sbjct: 63  FHSV-RPTDEHLLSESTIYVSLEPCSHYGKTPPCADLIVRKGVRRMVCGCVDPFSEVQGR 121

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
           G +    A      E+  G+ EQ    + ++F
Sbjct: 122 GIERIRQAG----IEVKVGVLEQECLALNREF 149


>gi|300113757|ref|YP_003760332.1| riboflavin biosynthesis protein RibD [Nitrosococcus watsonii C-113]
 gi|299539694|gb|ADJ28011.1| riboflavin biosynthesis protein RibD [Nitrosococcus watsonii C-113]
          Length = 371

 Score =  104 bits (262), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 33/154 (21%), Positives = 54/154 (35%), Gaps = 21/154 (13%)

Query: 3   KGNVFMSCALEEAQNAA-LRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
               +M  AL+ AQ      +  P VG V V   +I+    ++        +HAEI A+R
Sbjct: 2   NDRAYMVRALKLAQRGLFTTDPNPRVGCVLVRGGEIVGEGWHQQAGD----SHAEINALR 57

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
                           YVTLEPC        C  A+  A + R+     +P       G 
Sbjct: 58  QAG-----IRAQGSTCYVTLEPCCHRGRTPPCTEALIEAGVARVVAAMGDPHPKVASQGL 112

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKER 148
                A      ++  G+ ++ +  +   F +  
Sbjct: 113 AQLREAGL----QVEHGLLQEEAEALNVGFVQRL 142


>gi|229123633|ref|ZP_04252828.1| RibD (Riboflavin-specific deaminase) [Bacillus cereus 95/8201]
 gi|228659768|gb|EEL15413.1| RibD (Riboflavin-specific deaminase) [Bacillus cereus 95/8201]
          Length = 379

 Score =  104 bits (261), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 35/158 (22%), Positives = 55/158 (34%), Gaps = 24/158 (15%)

Query: 3   KGNVFMSCALEEAQN--AALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
               +M  AL+ A+           VGAV V +  I+    +     +    HAE+ A+ 
Sbjct: 11  TDQEYMRIALQLAEGTCGQTSPNPMVGAVVVKDGNIVGMGAHLRAGEE----HAEVHALH 66

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           M              +YVTLEPC        C   +    I R+     +       NG 
Sbjct: 67  MAGDKA-----KGATVYVTLEPCSHFGKTPPCCDLLIKKGITRVVIATLDCNPLVSGNGK 121

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF---KERR 149
           +    A      E+  G+ E  +  + + FF   K +R
Sbjct: 122 RKLEEAG----IEVTTGVLEAEAVLLNRYFFHYMKTKR 155


>gi|49480339|ref|YP_038170.1| riboflavin biosynthesis protein [Bacillus thuringiensis serovar
           konkukian str. 97-27]
 gi|49331895|gb|AAT62541.1| riboflavin biosynthesis protein [Bacillus thuringiensis serovar
           konkukian str. 97-27]
          Length = 370

 Score =  104 bits (261), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 35/158 (22%), Positives = 55/158 (34%), Gaps = 24/158 (15%)

Query: 3   KGNVFMSCALEEAQN--AALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
               +M  AL+ A+           VGAV V +  I+    +     +    HAE+ A+ 
Sbjct: 2   TDQEYMRIALQLAEGTCGQTSPNPMVGAVVVKDGNIVGMGAHLRAGEE----HAEVHALH 57

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           M              +YVTLEPC        C   +    I R+     +       NG 
Sbjct: 58  MAGDKA-----KGATVYVTLEPCSHFGKTPPCCDLLIKKGITRVVIATLDCNPLVSGNGK 112

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF---KERR 149
           +    A      E+  G+ E  +  + + FF   K +R
Sbjct: 113 RKLEEAG----IEVTTGVLEAEAVLLNRYFFHYMKTKR 146


>gi|210621234|ref|ZP_03292540.1| hypothetical protein CLOHIR_00483 [Clostridium hiranonis DSM 13275]
 gi|210154845|gb|EEA85851.1| hypothetical protein CLOHIR_00483 [Clostridium hiranonis DSM 13275]
          Length = 384

 Score =  104 bits (261), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 36/147 (24%), Positives = 55/147 (37%), Gaps = 21/147 (14%)

Query: 6   VFMSCALEEAQNAAL-RNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
            +M  ALE A+      N  P VGAV V N KII    ++         HAE  A+    
Sbjct: 23  KYMQLALENAKKGVGFVNPNPMVGAVIVKNGKIIGEGYHKKYGGL----HAERNALNN-- 76

Query: 64  RILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFY 117
                E   +  +YVTLEPC        C  AI   +I+++   + +P            
Sbjct: 77  ---CSENPKDATMYVTLEPCCHYGKTPPCTDAIIENKIKKVVIASLDPNPKMSGKSLDIL 133

Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDF 144
                    ++  G+ E    ++ + F
Sbjct: 134 KKRG----IKVEKGLLENEGDKLNETF 156


>gi|153855732|ref|ZP_01996746.1| hypothetical protein DORLON_02764 [Dorea longicatena DSM 13814]
 gi|149751955|gb|EDM61886.1| hypothetical protein DORLON_02764 [Dorea longicatena DSM 13814]
          Length = 378

 Score =  104 bits (261), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 35/151 (23%), Positives = 54/151 (35%), Gaps = 21/151 (13%)

Query: 3   KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
               +M  A++ A+      N  P VGAV V + +II    ++         HAE  AI 
Sbjct: 2   TDQEYMLRAIQLAKKGEGWTNPNPMVGAVIVKDGRIIGEGYHKKCGEL----HAERNAI- 56

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
                   E      +YVTLEPC        C  AI   +I+++  G+ +P       G 
Sbjct: 57  ----ASLTESAEGATIYVTLEPCCHYGKTPPCTEAIIEQKIKKVVIGSRDPNPKVAGKGA 112

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
           Q    +       +      +    +   FF
Sbjct: 113 QILRESG----ITVVQDFMREECDCLNPVFF 139


>gi|319401074|gb|EFV89293.1| riboflavin biosynthesis protein RibD [Staphylococcus epidermidis
           FRI909]
          Length = 347

 Score =  104 bits (261), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 38/151 (25%), Positives = 61/151 (40%), Gaps = 24/151 (15%)

Query: 7   FMSCALEEAQNAALRNEI--PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           FM  A++ AQ    +  +  PVG+V V N +I+    +  +  K    HAE+ AI M   
Sbjct: 4   FMDDAIQLAQMVNGQTGVNPPVGSVVVKNGRIVGLGAHLKKGDK----HAEVQAIEMAGL 59

Query: 65  ILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
                      +YV+LEPC        C   I  A I ++ Y   +     +  G +   
Sbjct: 60  NAQ-----GATIYVSLEPCTHHGSTPPCVDKIIEAGISKVIYAVKDTTL--VSKGDEILR 112

Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
            A      E+    +E  +  + +DFF  +R
Sbjct: 113 EAG----IEVEFQYNEN-AATLYRDFFTAKR 138


>gi|229093172|ref|ZP_04224290.1| RibD (Riboflavin-specific deaminase) [Bacillus cereus Rock3-42]
 gi|228690146|gb|EEL43940.1| RibD (Riboflavin-specific deaminase) [Bacillus cereus Rock3-42]
          Length = 379

 Score =  104 bits (261), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 35/158 (22%), Positives = 55/158 (34%), Gaps = 24/158 (15%)

Query: 3   KGNVFMSCALEEAQN--AALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
               +M  AL+ A+           VGAV V +  I+    +     +    HAE+ A+ 
Sbjct: 11  TDQEYMRIALQLAEGTCGQTSPNPMVGAVVVKDGNIVGMGAHLRAGEE----HAEVHALH 66

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           M              +YVTLEPC        C   +    I R+     +       NG 
Sbjct: 67  MAGDKA-----KGATVYVTLEPCSHFGKTPPCCDLLIKKGITRVVIATLDCNPLVSGNGK 121

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF---KERR 149
           +    A      E+  G+ E  +  + + FF   K +R
Sbjct: 122 RKLEEAG----IEVTTGVLEAEAVLLNRYFFHYMKTKR 155


>gi|218888179|ref|YP_002437500.1| riboflavin biosynthesis protein RibD [Desulfovibrio vulgaris str.
           'Miyazaki F']
 gi|218759133|gb|ACL10032.1| riboflavin biosynthesis protein RibD [Desulfovibrio vulgaris str.
           'Miyazaki F']
          Length = 419

 Score =  104 bits (261), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 38/148 (25%), Positives = 59/148 (39%), Gaps = 19/148 (12%)

Query: 5   NVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
            +FM  A+  A+         P VGAV V + ++++R  +          HAE+  +R  
Sbjct: 8   EIFMREAIALARRGRWRAAPNPTVGAVLVRDGQVVARGYH----TACGMPHAEVECLRDA 63

Query: 63  CRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116
                        L VTLEPC        C+ A+  A IR +  G ++P       G +F
Sbjct: 64  AANGVDP--AACTLMVTLEPCNHHGKTPPCSQAVLAAGIRHVVVGMADPNPVARG-GAEF 120

Query: 117 YTLATCHHSPEIYPGISEQRSRQIIQDF 144
                  H   +  G+ EQ  R ++ DF
Sbjct: 121 LRQ----HGVRVDMGVCEQDCRDLVADF 144


>gi|119474644|ref|ZP_01614997.1| riboflavin-specific deaminase/reductase [marine gamma
           proteobacterium HTCC2143]
 gi|119450847|gb|EAW32080.1| riboflavin-specific deaminase/reductase [marine gamma
           proteobacterium HTCC2143]
          Length = 370

 Score =  104 bits (261), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 34/153 (22%), Positives = 58/153 (37%), Gaps = 22/153 (14%)

Query: 3   KGNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
               +M  A++ A+           VG + V N +II R  +         AHAE+ AI 
Sbjct: 2   NDADYMQLAIDLAEKGLYTASPNPRVGCIIVRNGQIIGRGYHVRTGQ----AHAEVNAIA 57

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
               +       +  +YVTLEPC        C+ A+  A + R+    ++P      +G 
Sbjct: 58  DAGNV------EDATVYVTLEPCSHTGRTPPCSDALITANVARVVVAMADPNPLVAGSGI 111

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
                A       +  G+   ++RQ+   + K 
Sbjct: 112 AKLEQAG----IVVELGLLASQARQLNPGYIKR 140


>gi|307564973|ref|ZP_07627490.1| riboflavin biosynthesis protein RibD [Prevotella amnii CRIS 21A-A]
 gi|307346286|gb|EFN91606.1| riboflavin biosynthesis protein RibD [Prevotella amnii CRIS 21A-A]
          Length = 313

 Score =  104 bits (261), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 36/150 (24%), Positives = 57/150 (38%), Gaps = 18/150 (12%)

Query: 4   GNVFMSCALEEAQNA--ALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIR 60
             ++M   L+ A+N     +    VGAV V  N +II    +     +    HAE+ A  
Sbjct: 7   DEMYMRRCLQLAKNGMLLAKPNPMVGAVIVSDNGRIIGEGYHICYGKE----HAEVNAF- 61

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
              R   + +L +  +YV LEPC        CA  I    + R+  G  +P       G 
Sbjct: 62  ASVRKKDEHLLSKSTIYVNLEPCSHFGKTPPCADLIIKKGVGRVVCGCIDPFSVVSGRGV 121

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
           Q    A       +  G+ E+    + + F
Sbjct: 122 QRIREAGIP----VSVGVLERECLALNKRF 147


>gi|302384487|ref|YP_003820309.1| CMP/dCMP deaminase zinc-binding protein [Clostridium
           saccharolyticum WM1]
 gi|302195115|gb|ADL02686.1| CMP/dCMP deaminase zinc-binding protein [Clostridium
           saccharolyticum WM1]
          Length = 161

 Score =  104 bits (261), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 31/99 (31%), Positives = 43/99 (43%), Gaps = 2/99 (2%)

Query: 9   SCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
            CA E ++ +      P GA+    +  I+    N        T HAE        ++ S
Sbjct: 12  RCA-EISRQSREAGNTPFGALLAGKDGSILLEQPNIEITEGKCTGHAETQVAERASQLYS 70

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPK 106
           ++ L +  LY T EPC MCA AI  A I R+ YG S   
Sbjct: 71  KDFLSDCTLYTTAEPCAMCAGAIYWAGIGRVVYGMSEKD 109


>gi|229198234|ref|ZP_04324942.1| RibD (Riboflavin-specific deaminase) [Bacillus cereus m1293]
 gi|228585253|gb|EEK43363.1| RibD (Riboflavin-specific deaminase) [Bacillus cereus m1293]
          Length = 373

 Score =  104 bits (261), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 38/162 (23%), Positives = 62/162 (38%), Gaps = 26/162 (16%)

Query: 1   MKK--GNVFMSCALEEAQ-NAALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56
           MKK     +M  AL+ A+  +   +  P VGAV V +  I+    +     +    HAE+
Sbjct: 1   MKKMTDQEYMRIALQLAEGTSGQTSPNPMVGAVVVKDGNIVGMGAHLRAGEE----HAEV 56

Query: 57  LAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGI 110
            A+ M              +YVTLEPC        C   +    ++R+     +      
Sbjct: 57  HALHMAGDKA-----KGATVYVTLEPCSHFGKTPPCCELLIKKEVKRVVIATLDCNPLVS 111

Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF---KERR 149
            NG +    A      E+  G+ E  +  + + FF   K +R
Sbjct: 112 GNGKKRLEEAG----IEVTTGVLEAEAVLLNRYFFHYMKTKR 149


>gi|225181336|ref|ZP_03734780.1| riboflavin biosynthesis protein RibD [Dethiobacter alkaliphilus AHT
           1]
 gi|225167917|gb|EEG76724.1| riboflavin biosynthesis protein RibD [Dethiobacter alkaliphilus AHT
           1]
          Length = 367

 Score =  104 bits (261), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 34/154 (22%), Positives = 58/154 (37%), Gaps = 25/154 (16%)

Query: 1   MKKGNVFMSCALEEAQNAALRN----EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56
           M     +M  AL+ A  A  +        VGAV V + + +    ++         HAEI
Sbjct: 1   MDADERYMWLALDLA--AQGQGTTSPNPMVGAVLVKDGETVGTGYHQKAGG----PHAEI 54

Query: 57  LAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGI 110
           +A+                LYVTLEPC        C   I  A +R++     +P     
Sbjct: 55  IALEEAGEAA-----RGATLYVTLEPCSHTGKTPPCVDRIIAAGVRKVVVAMQDPNELVN 109

Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
             G +    A      ++  G+ E+++ ++ + F
Sbjct: 110 GLGLKKLQEAG----IKVKSGVLEEKALRLNEVF 139


>gi|304570589|ref|YP_388926.2| 5-amino-6-(5-phosphoribosylamino)uracil reductase /
           diaminohydroxyphosphoribosylaminopyrimidine deaminase
           [Desulfovibrio desulfuricans subsp. desulfuricans str.
           G20]
          Length = 373

 Score =  104 bits (261), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 39/155 (25%), Positives = 57/155 (36%), Gaps = 22/155 (14%)

Query: 1   MKKGN---VFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAE 55
           M   +    FM  A+  A+      +  P VGAV V + + ++R  +          HAE
Sbjct: 1   MSHDHPFSSFMLEAVALAEKGRWATSPNPCVGAVLVKDGQTVARGWHTAYGK----PHAE 56

Query: 56  ILAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGG 109
           I  +R   R        E  L VTLEPC        C+ A+  A IR +  G  +P    
Sbjct: 57  IECLRDAARRGVNP--AECTLVVTLEPCNHTGKTPPCSIAVLQAGIRHVVVGMMDPNPVA 114

Query: 110 IENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
              G  F           +  G+  Q    ++ DF
Sbjct: 115 QG-GANFLRENG----VTVETGVCRQECEDVVDDF 144


>gi|285019600|ref|YP_003377311.1| riboflavin biosynthesis RibD oxidoreductase [Xanthomonas
           albilineans GPE PC73]
 gi|283474818|emb|CBA17317.1| probable riboflavin biosynthesis ribd oxidoreductase protein
           [Xanthomonas albilineans]
          Length = 369

 Score =  104 bits (261), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 35/149 (23%), Positives = 59/149 (39%), Gaps = 21/149 (14%)

Query: 4   GNVFMSCALEEAQN-AALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
            + +M+ AL  A+  A      P VG V V +++ +    ++         HAE+ A+R 
Sbjct: 8   DHRWMAQALRLAERGAYTTRPNPMVGCVIVRDDEQVGEGFHQRAGG----PHAEVFALRA 63

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
                  E       YVTLEPC        CA A+  A + R+    ++P       G  
Sbjct: 64  AG-----EYARGATAYVTLEPCAHYGRTPPCALALIEAGVARVVVAMADPFPQVNGGGFA 118

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDF 144
               A       +  G+ E+++R + + F
Sbjct: 119 LLREAG----IAVQSGLMEEQARALNRGF 143


>gi|322434629|ref|YP_004216841.1| riboflavin biosynthesis protein RibD [Acidobacterium sp. MP5ACTX9]
 gi|321162356|gb|ADW68061.1| riboflavin biosynthesis protein RibD [Acidobacterium sp. MP5ACTX9]
          Length = 373

 Score =  104 bits (261), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 40/152 (26%), Positives = 57/152 (37%), Gaps = 18/152 (11%)

Query: 1   MKKGNVFMSCALEEAQ--NAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           M +   FM  ALE A+   A       VG V V + KII+   +          HAEI A
Sbjct: 1   MSQDQQFMQRALELAESTTALASPNPQVGCVFVRDGKIIAEGFHLYEARD----HAEIAA 56

Query: 59  IRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIEN 112
           ++      +   +     YVTLEPC+       CA  +  A I R      +       N
Sbjct: 57  LKQA--EANGIDVAGDTAYVTLEPCSHHGRTGPCADVLIAAGISRCVIATLDANPVVRGN 114

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
           G      A       +  G+ EQ++R +   F
Sbjct: 115 GVAKLEAAG----IAVTVGVLEQKARTLNDAF 142


>gi|194367233|ref|YP_002029843.1| CMP/dCMP deaminase zinc-binding [Stenotrophomonas maltophilia
           R551-3]
 gi|194350037|gb|ACF53160.1| CMP/dCMP deaminase zinc-binding [Stenotrophomonas maltophilia
           R551-3]
          Length = 150

 Score =  104 bits (261), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 32/151 (21%), Positives = 53/151 (35%), Gaps = 21/151 (13%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRM 61
                +  A+ EA+       +P+GA     + +++    NR  +  D + H E  A R 
Sbjct: 6   DYQALLQTAIAEARQGLAEGGVPIGAALYHNDGRLLGCGHNRRVQESDPSVHGETDAFRK 65

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI----ENGTQFY 117
             R   Q    +  +  TL PC  C+  +    I  +  G S    GGI    ENG +  
Sbjct: 66  AGR---QRRYQDTIMVTTLAPCWYCSGLVRQFNIGTVVVGESRTFQGGIDWLRENGVKVI 122

Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDFFKER 148
            L +             Q    ++  F  + 
Sbjct: 123 DLDS-------------QECVDLLGGFIAQH 140


>gi|159903849|ref|YP_001551193.1| putative diaminohydroxyphosphoribosylaminopyrimidine deaminase and
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Prochlorococcus marinus str. MIT 9211]
 gi|159889025|gb|ABX09239.1| putative Diaminohydroxyphosphoribosylaminopyrimidine deaminase and
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Prochlorococcus marinus str. MIT 9211]
          Length = 365

 Score =  104 bits (261), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 39/153 (25%), Positives = 59/153 (38%), Gaps = 23/153 (15%)

Query: 6   VFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKI-ISRAGNRNRELKDVTAHAEILAIRMG 62
            +M  A + AQ A    N  P VGAV +  +K+ I    +     K  + HAE+ A+R  
Sbjct: 13  YWMQRAFQLAQLADGETNPNPLVGAVVLDPDKLLIGEGFH----SKAGSPHAEVEALRQA 68

Query: 63  CRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116
                        L VTLEPC        C   I  + + R+  G  +P      NG + 
Sbjct: 69  GDAA-----KGGTLLVTLEPCCHYGLTPPCTKTIIESGVSRVVVGLQDPDPRVSGNGIRL 123

Query: 117 YTLATCHHSPEIYPGISEQRSRQIIQDF-FKER 148
              A      E+  GI ++      + F F+ +
Sbjct: 124 LKEAG----IEVITGILKEEISFQNRAFIFRIK 152


>gi|332534978|ref|ZP_08410796.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Pseudoalteromonas haloplanktis ANT/505]
 gi|332035596|gb|EGI72088.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Pseudoalteromonas haloplanktis ANT/505]
          Length = 377

 Score =  104 bits (261), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 35/155 (22%), Positives = 61/155 (39%), Gaps = 23/155 (14%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           +   ++M+ A+E A+        P   VG V V NN+II    ++         HAE+ A
Sbjct: 9   EHDEMYMARAIELAKKGRFTT-TPNPNVGCVLVKNNQIIGEGFHQLAGQG----HAEVNA 63

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
           + +  +            YVTLEPC        CA  +  A + ++     +        
Sbjct: 64  LAVAGKNAQ-----GATAYVTLEPCSHYGRTPPCAEGLKAAGVVKVIAAMVDTNPQVAGK 118

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
           G +  + A      ++  G+ E ++R +   FFK 
Sbjct: 119 GLKILSDAG----IDVAYGLLESQARALNVGFFKR 149


>gi|206976286|ref|ZP_03237194.1| riboflavin biosynthesis protein RibD [Bacillus cereus H3081.97]
 gi|206745482|gb|EDZ56881.1| riboflavin biosynthesis protein RibD [Bacillus cereus H3081.97]
          Length = 370

 Score =  104 bits (261), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 35/158 (22%), Positives = 59/158 (37%), Gaps = 24/158 (15%)

Query: 3   KGNVFMSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
               +M  AL+ A+    +    P VGAV V +  I+    +     +    HAE+ A+ 
Sbjct: 2   TDQEYMRIALQLAEGTFGQTSPNPMVGAVVVKDGNIVGMGAHLRAGEE----HAEVHALH 57

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           M              +YVTLEPC        C   +    ++R+     +       NG 
Sbjct: 58  MAGDKA-----KGATVYVTLEPCSHFGKTPPCCELLIKKEVKRVVIATLDCNPLVSGNGK 112

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF---KERR 149
           +    A      E+  G+ E+ +  + + FF   K +R
Sbjct: 113 KRLEEAG----IEVTTGVLEEEAVLLNRYFFHYMKTKR 146


>gi|109897636|ref|YP_660891.1| riboflavin biosynthesis protein RibD [Pseudoalteromonas atlantica
           T6c]
 gi|109699917|gb|ABG39837.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Pseudoalteromonas atlantica T6c]
          Length = 372

 Score =  104 bits (261), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 36/153 (23%), Positives = 59/153 (38%), Gaps = 22/153 (14%)

Query: 4   GNVFMSCALEEAQNA-ALRNEIP-VGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIR 60
               M+ A+  A+      +  P VG V       I+ +  ++    K  T HAEI AI 
Sbjct: 8   DAKMMALAIRLAEKGQYTTSPNPNVGCVITDAQGNIVGQGWHQ----KAGTPHAEIHAIA 63

Query: 61  MGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGT 114
                   E       YVTLEPC        C+ A+  A ++R+     +P      +G 
Sbjct: 64  QAG-----ERTKGATAYVTLEPCNHHGRTGPCSEALLDAGVKRVVAAMVDPNPLVAGSGL 118

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
           Q  + A      ++  G+ E  ++ + + F K 
Sbjct: 119 QKLSDAG----VQVSSGLLESEAKALNRGFIKR 147


>gi|290968502|ref|ZP_06560041.1| riboflavin biosynthesis protein RibD [Megasphaera genomosp. type_1
           str. 28L]
 gi|290781498|gb|EFD94087.1| riboflavin biosynthesis protein RibD [Megasphaera genomosp. type_1
           str. 28L]
          Length = 378

 Score =  104 bits (261), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 33/156 (21%), Positives = 58/156 (37%), Gaps = 24/156 (15%)

Query: 1   MKKGNVFMSCALEEAQNAA---LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57
           M+    +M  AL  A+ A      N + VG V V + +I+    +          HAE+L
Sbjct: 1   MEAAE-YMKKALALAKIALGYTSPNPV-VGCVIVKDGEIVGTGYHHQAGA----PHAEVL 54

Query: 58  AIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIE 111
           A++        +      +YVTLEPC        CA  +   +I+++     +P      
Sbjct: 55  ALQEAG-----DRATGATVYVTLEPCAHYGRTPPCARTLVQHKIKKVVIAMLDPNPLVAG 109

Query: 112 NGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
            G      A       +  G+    + ++ + F K 
Sbjct: 110 KGAAILRQAG----IVVEVGLLSAEAVKLNEVFIKN 141


>gi|256421260|ref|YP_003121913.1| riboflavin biosynthesis protein RibD [Chitinophaga pinensis DSM
           2588]
 gi|256036168|gb|ACU59712.1| riboflavin biosynthesis protein RibD [Chitinophaga pinensis DSM
           2588]
          Length = 352

 Score =  104 bits (261), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 38/159 (23%), Positives = 62/159 (38%), Gaps = 24/159 (15%)

Query: 4   GNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
              +M   L+ A+  A    +   P VGAV V   +II    +R        AHAE+  +
Sbjct: 6   DEFYMQRCLQLAKLGA--GNVAPNPMVGAVLVYEGRIIGEGYHRQYGF----AHAEVNCV 59

Query: 60  RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113
               +   Q ++P   +YV+LEPC        CA  I   +I  +  G  +        G
Sbjct: 60  HSV-KPEDQHLIPAATMYVSLEPCAHYGKTPPCAELIVSQQISTVVIGCVDTFSQVAGKG 118

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFF---KERR 149
                 A       +  G+ E  +R++   FF   +++R
Sbjct: 119 IGILKAAG----ITVRTGVLEAAARELNSRFFTFHEQKR 153


>gi|288574956|ref|ZP_06393313.1| riboflavin biosynthesis protein RibD [Dethiosulfovibrio
           peptidovorans DSM 11002]
 gi|288570697|gb|EFC92254.1| riboflavin biosynthesis protein RibD [Dethiosulfovibrio
           peptidovorans DSM 11002]
          Length = 356

 Score =  104 bits (261), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 34/152 (22%), Positives = 51/152 (33%), Gaps = 21/152 (13%)

Query: 3   KGNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +   +M  AL  A            VG V   + +I+    +R         HAE  A+ 
Sbjct: 6   EDVTYMRRALSLAMRGTGYTSPNPMVGCVIARDGEILGEGYHRRCGA----PHAEREALM 61

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
                +          YVTLEPC        CA A+  A I R      +P       G 
Sbjct: 62  SAVGGV-----AGATAYVTLEPCSHHGKTPPCAPALVEAGIGRCVVATVDPDPRVSGRGI 116

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
           +    A      ++  G+ E+  R + + F K
Sbjct: 117 EILRSAG----VDVSVGVLEEECRWLNRGFIK 144


>gi|225874950|ref|YP_002756409.1| riboflavin biosynthesis protein RibD [Acidobacterium capsulatum
           ATCC 51196]
 gi|225792610|gb|ACO32700.1| riboflavin biosynthesis protein RibD [Acidobacterium capsulatum
           ATCC 51196]
          Length = 380

 Score =  104 bits (261), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 37/151 (24%), Positives = 54/151 (35%), Gaps = 21/151 (13%)

Query: 2   KKGNVFMSCALEEAQ--NAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
            +   +M  AL  A+   A       VG V V    ++    +     KD   HAEI+A+
Sbjct: 13  NEDQRWMQRALALARLSKAVSSPNPAVGCVLVREGALVGEGYHD-YSRKD---HAEIVAL 68

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENG 113
           +        +       YVTLEPC        C  A+  A +RR+     +P       G
Sbjct: 69  KQAG-----DQARGATAYVTLEPCCHTGRTGPCTEALIAAGVRRVVAATVDPNPKVSGQG 123

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
            +    A      E   GI E  +R +   F
Sbjct: 124 LERLRQAG----IETTAGIGESEARALNDAF 150


>gi|108800567|ref|YP_640764.1| CMP/dCMP deaminase, zinc-binding protein [Mycobacterium sp. MCS]
 gi|119869706|ref|YP_939658.1| CMP/dCMP deaminase, zinc-binding [Mycobacterium sp. KMS]
 gi|126436183|ref|YP_001071874.1| CMP/dCMP deaminase, zinc-binding [Mycobacterium sp. JLS]
 gi|108770986|gb|ABG09708.1| CMP/dCMP deaminase, zinc-binding protein [Mycobacterium sp. MCS]
 gi|119695795|gb|ABL92868.1| CMP/dCMP deaminase, zinc-binding protein [Mycobacterium sp. KMS]
 gi|126235983|gb|ABN99383.1| CMP/dCMP deaminase, zinc-binding protein [Mycobacterium sp. JLS]
          Length = 154

 Score =  104 bits (260), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 32/138 (23%), Positives = 50/138 (36%), Gaps = 13/138 (9%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +  A  EA+       IP+GA        ++    NR  +  D + HAE  A R   R  
Sbjct: 15  LDVAYAEARKGLSEGGIPIGAALFSAGGTLLGSGHNRRVQDDDPSVHAETDAFRNAGR-- 72

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
            Q       +  TL PC  C+  +    I  +  G S    GG E   +        H  
Sbjct: 73  -QRDYRSTVMVTTLSPCWYCSGLVRQFNIGAVIVGESRTFTGGHEWLAE--------HGV 123

Query: 127 EIYPGISEQRSRQIIQDF 144
           E+   + + R   ++ +F
Sbjct: 124 EVTV-LDDDRCVSMMTEF 140


>gi|228934673|ref|ZP_04097506.1| Riboflavin biosynthesis protein [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228824925|gb|EEM70724.1| Riboflavin biosynthesis protein [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
          Length = 360

 Score =  104 bits (260), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 43/146 (29%), Positives = 63/146 (43%), Gaps = 23/146 (15%)

Query: 8   MSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           M  ALE A  A      P   VG+V V +N+I+    +          HAEI AIRM   
Sbjct: 1   MKLALENA-KAMKGQTTPNPLVGSVIVNDNRIVGIGAHMKAGE----PHAEIHAIRMAG- 54

Query: 65  ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
               E      +YVTLEPC+       CA AI  A I+++     +P       G +   
Sbjct: 55  ----EQARGGTIYVTLEPCSHHGRTGPCAEAIVQAGIKKVVVATLDPNPLVSGRGIKILQ 110

Query: 119 LATCHHSPEIYPGISEQRSRQIIQDF 144
            A      E+  G+ E++S+++ + F
Sbjct: 111 DAG----IEVLVGVCEEKSKKMNEVF 132


>gi|21241517|ref|NP_641099.1| 5-amino-6-uracil reductase [Xanthomonas axonopodis pv. citri str.
           306]
 gi|21106864|gb|AAM35635.1| riboflavin-specific deaminase [Xanthomonas axonopodis pv. citri
           str. 306]
          Length = 369

 Score =  104 bits (260), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 35/150 (23%), Positives = 58/150 (38%), Gaps = 21/150 (14%)

Query: 3   KGNVFMSCALEEAQN-AALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
             + +M+ AL  A+  A      P VG V V +   +    ++         HAE+ A+R
Sbjct: 11  DDHRWMAQALRLAERGAYTTRPNPMVGCVIVRDGVCVGEGFHQRAGG----PHAEVFALR 66

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
               +           YVTLEPC        CA A+  A +RR+    ++P       G 
Sbjct: 67  AAGELA-----RGATAYVTLEPCAHYGRTPPCALALIEAGVRRVVAAMADPFPQVNGGGF 121

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
                A      E+  G+ + ++R + + F
Sbjct: 122 ALLREAG----IEVLSGVMQAQARTLNRGF 147


>gi|253998546|ref|YP_003050609.1| riboflavin biosynthesis protein RibD [Methylovorus sp. SIP3-4]
 gi|253985225|gb|ACT50082.1| riboflavin biosynthesis protein RibD [Methylovorus sp. SIP3-4]
          Length = 368

 Score =  104 bits (260), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 37/157 (23%), Positives = 58/157 (36%), Gaps = 25/157 (15%)

Query: 4   GNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
            +  M+ AL  A+        P   VG V V + +I+    +          HAE+ A+R
Sbjct: 6   DHQMMARALRLAEQGLYTT-TPNPRVGCVIVKDGQIVGEGAHLKAGE----PHAEVHALR 60

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
               +         D YVTLEPC        CA A+  A ++R+     +P      +G 
Sbjct: 61  QAGNLAQ-----GADAYVTLEPCSHHGRTPPCADALIKAGVKRVVAAMQDPNPQVAGSGL 115

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE--RR 149
           Q            +  G+ E ++R +   F     RR
Sbjct: 116 QRLQAQG----IAVQSGLLEAQARSLNAGFISRMTRR 148


>gi|58259071|ref|XP_566948.1| cytosine deaminase [Cryptococcus neoformans var. neoformans JEC21]
 gi|57223085|gb|AAW41129.1| cytosine deaminase, putative [Cryptococcus neoformans var.
           neoformans JEC21]
          Length = 165

 Score =  104 bits (260), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 35/145 (24%), Positives = 61/145 (42%), Gaps = 12/145 (8%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVL--NNKIISRAGNRNRELKDVTAHAEILAI 59
           +    FMS A E+A  +     IP+GA  V    ++IISR  N   +L     H E+  +
Sbjct: 12  EDYPHFMSVAHEQALKSLSEGGIPIGAALVHLPTSRIISRGHNNRVQLSSNVRHGEMDCL 71

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
               R+    +L E  ++ TL PC MC+A   L +IR +    +    GG     Q    
Sbjct: 72  ENLGRVPEG-LLSECAMFTTLSPCIMCSATCILYKIRTVVLAENENFLGG----EQLLRD 126

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDF 144
              +        +  +  + +++++
Sbjct: 127 NGAN-----VINLDSEEIKNMMKNW 146


>gi|325922230|ref|ZP_08184016.1| cytosine/adenosine deaminase [Xanthomonas gardneri ATCC 19865]
 gi|325547300|gb|EGD18368.1| cytosine/adenosine deaminase [Xanthomonas gardneri ATCC 19865]
          Length = 151

 Score =  104 bits (260), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 28/135 (20%), Positives = 49/135 (36%), Gaps = 13/135 (9%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +  A+ EA+       IP+GA     + +++    NR  +  D + H E  A R   R  
Sbjct: 11  LDTAIAEARQGLAEGGIPIGAALYHNDGRLLGCGHNRRVQENDPSVHGETDAFRKAGR-- 68

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
            Q    +  +  TL PC  C+  +    I  +  G S    GG+    +        H  
Sbjct: 69  -QRRYKDTIMVTTLAPCWYCSGLVRQFNIGTVVVGESVTFQGGVSWLRE--------HGV 119

Query: 127 EIYPGISEQRSRQII 141
            +   +  Q    ++
Sbjct: 120 NVID-LQSQECIDLL 133


>gi|219129188|ref|XP_002184777.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217403886|gb|EEC43836.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 564

 Score =  104 bits (260), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 39/153 (25%), Positives = 62/153 (40%), Gaps = 15/153 (9%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRN-------RELKDVTAHA 54
           +     M  A+ EA  A    ++P GAV  +++ I++RA N+            DVT HA
Sbjct: 7   RDDEACMREAIAEAAAATSEGKMPFGAVLAIDSVIVARAHNQCPAAAKRGGGTGDVTRHA 66

Query: 55  EILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIE--N 112
           E+  +R+    L+ E      LY + EPC MCA AI  + + ++ YG S  +   +    
Sbjct: 67  EMELVRLFTSKLTAEERSNAVLYTSTEPCVMCAGAIYWSGVSKVVYGCSARQLEALSGPG 126

Query: 113 GTQFYTLATCH------HSPEIYPGISEQRSRQ 139
           G                   E    +  + S Q
Sbjct: 127 GFDIPVDTLYGMASKGARRMECLGPLLAEESLQ 159


>gi|313109499|ref|ZP_07795455.1| riboflavin-specific deaminase/reductase [Pseudomonas aeruginosa
           39016]
 gi|310881957|gb|EFQ40551.1| riboflavin-specific deaminase/reductase [Pseudomonas aeruginosa
           39016]
          Length = 373

 Score =  104 bits (260), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 35/152 (23%), Positives = 55/152 (36%), Gaps = 21/152 (13%)

Query: 4   GNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
             ++M+ ALE A+           VG V V + +++    +          HAE+ A+R 
Sbjct: 5   DPLYMARALELARQGLYSTHPNPRVGCVLVKDGQVVGEGWHVRAGE----PHAEVHALRQ 60

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
                  E       YVTLEPC        CA A+  A + R+     +P       G  
Sbjct: 61  AG-----ENARGATAYVTLEPCSHFGRTPPCADALVGAGVARVVAAMQDPNPEVGGRGLL 115

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
               A       +  G+ E  +R++   F K 
Sbjct: 116 RLMQAG----IAVQSGVLEAEARELNIGFIKR 143


>gi|229168856|ref|ZP_04296574.1| RibD (Riboflavin-specific deaminase) [Bacillus cereus AH621]
 gi|228614586|gb|EEK71693.1| RibD (Riboflavin-specific deaminase) [Bacillus cereus AH621]
          Length = 379

 Score =  104 bits (260), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 36/158 (22%), Positives = 61/158 (38%), Gaps = 24/158 (15%)

Query: 3   KGNVFMSCALEEAQ-NAALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
               +M  AL+ AQ  +   +  P VGAV V + KI+    +     +    HAE+ A+ 
Sbjct: 11  TDQEYMRIALQLAQGTSGQTSPNPMVGAVVVKDGKIVGMGAHMRAGEE----HAEVHALH 66

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           M       E   +  +YVTLEPC        C   +    ++R+     +       NG 
Sbjct: 67  MAG-----ERAKDATVYVTLEPCSHFGKTPPCCELLIEKGVQRVVIATLDCNPLVSGNGK 121

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF---KERR 149
           +           E+  G+ +  +  + + FF   K +R
Sbjct: 122 RRLEEVG----IEVTTGVLDAEATLLNRYFFHYMKTKR 155


>gi|228916750|ref|ZP_04080315.1| RibD (Riboflavin-specific deaminase) [Bacillus thuringiensis
           serovar pulsiensis BGSC 4CC1]
 gi|228842937|gb|EEM88020.1| RibD (Riboflavin-specific deaminase) [Bacillus thuringiensis
           serovar pulsiensis BGSC 4CC1]
          Length = 379

 Score =  104 bits (260), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 35/158 (22%), Positives = 55/158 (34%), Gaps = 24/158 (15%)

Query: 3   KGNVFMSCALEEAQN--AALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
               +M  AL+ A+           VGAV V +  I+    +     +    HAE+ A+ 
Sbjct: 11  TDQEYMRIALQLAEGTCGQTSPNPMVGAVVVKDGNIVGMGAHLRAGEE----HAEVHALH 66

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           M              +YVTLEPC        C   +    I R+     +       NG 
Sbjct: 67  MAGDKA-----KGATVYVTLEPCSHFGKTPPCCDLLIKKGITRVVIATLDCNPLVSGNGK 121

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF---KERR 149
           +    A      E+  G+ E  +  + + FF   K +R
Sbjct: 122 RKLEEAG----IEVTTGVLEAEAVLLNRYFFHYMKTKR 155


>gi|321249831|ref|XP_003191590.1| cytosine deaminase [Cryptococcus gattii WM276]
 gi|317458057|gb|ADV19803.1| Cytosine deaminase, putative [Cryptococcus gattii WM276]
          Length = 165

 Score =  104 bits (260), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 36/149 (24%), Positives = 63/149 (42%), Gaps = 20/149 (13%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVL--NNKIISRAGNRNRELKDVTAHAEILAI 59
           +    FMS A ++A  +     IP+GA  V    ++IISR  N   +L     H E+  +
Sbjct: 12  EDYPHFMSVAHDQALKSRSEGGIPIGAALVHLPTSRIISRGHNNRVQLSSNVRHGEMDCL 71

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG----IENGTQ 115
               R+    +L E  ++ TL PC MC+A   L +I  +    +    GG    ++NG  
Sbjct: 72  ENLGRVPEG-LLRECAMFTTLSPCIMCSATCILYKIPTVVLAENENFLGGEQLLVDNGVN 130

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDF 144
              L +                +++++D+
Sbjct: 131 VINLDS-------------DEIKKMMKDW 146


>gi|229075817|ref|ZP_04208794.1| RibD (Riboflavin-specific deaminase) [Bacillus cereus Rock4-18]
 gi|228707369|gb|EEL59565.1| RibD (Riboflavin-specific deaminase) [Bacillus cereus Rock4-18]
          Length = 379

 Score =  104 bits (260), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 35/158 (22%), Positives = 59/158 (37%), Gaps = 24/158 (15%)

Query: 3   KGNVFMSCALEEAQ-NAALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
               +M  AL+ A+  +   +  P VGAV V +  I+    +     +    HAE+ A+ 
Sbjct: 11  TDQEYMRIALQLAKGTSGQTSPNPMVGAVVVKDGNIVGMGAHLRAGEE----HAEVHALH 66

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           M              +YVTLEPC        C   +    ++R+     +       NG 
Sbjct: 67  MAGEKAKN-----ATVYVTLEPCSHFGKTPPCCELLIEKGVKRIVIATLDCNPLVSGNGK 121

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF---KERR 149
           +    A      E+  G+ E  +  + + FF   K +R
Sbjct: 122 KKLEEAG----IEVTTGVLETEAVLLNRYFFHYMKTKR 155


>gi|94677040|ref|YP_589028.1| riboflavin biosynthesis protein RibD [Baumannia cicadellinicola
           str. Hc (Homalodisca coagulata)]
 gi|94220190|gb|ABF14349.1| riboflavin biosynthesis protein RibD [Baumannia cicadellinicola
           str. Hc (Homalodisca coagulata)]
          Length = 378

 Score =  104 bits (260), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 37/157 (23%), Positives = 59/157 (37%), Gaps = 21/157 (13%)

Query: 1   MKKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           MK    +++ A + A+         P VG V + +++++    +          HAEI A
Sbjct: 1   MKSDEFYLALAFKLARRGKLTTAPNPNVGCVIIRDHRVVGEGYHVRAGE----PHAEIHA 56

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
           +RM   +           Y+TLEPC        C  A+  A I R+     +P       
Sbjct: 57  LRMAGAMAY-----GATAYITLEPCNHYGHTPPCTEALIAAGISRVVAAMLDPNPKVNGR 111

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
           G   Y L   +   E+   I  Q +  I + F K  R
Sbjct: 112 G--LYRLQQAN--IEVRHSIMLQDAEMINKGFLKRMR 144


>gi|331703065|ref|YP_004399752.1| cytosine deaminase [Mycoplasma mycoides subsp. capri LC str. 95010]
 gi|328801620|emb|CBW53773.1| Cytosine deaminase [Mycoplasma mycoides subsp. capri LC str. 95010]
          Length = 147

 Score =  104 bits (260), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 43/150 (28%), Positives = 70/150 (46%), Gaps = 4/150 (2%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNK-IISRAGNRNRELKDVTAHAEILAI 59
           M   N  +   + +++ A   N+IPV    + NN  I++ + N   + K+++ HAEI AI
Sbjct: 1   MNDFNNILDLMIYQSKKAIKHNDIPVCCCIIDNNNNILTISINTRYKNKNISQHAEINAI 60

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
                 L+   L E  L  TLEPC MC +AI   +I  +YY   + K G I+N       
Sbjct: 61  NKLINKLNTFNLSEYKLITTLEPCMMCYSAIKQVKINTIYYLVDSYKFG-IQNNYSI-ND 118

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
              +   +I     +    +++ DFF  +R
Sbjct: 119 QNLN-LIQIKNHNKQSEYIKLLNDFFINKR 147


>gi|313200621|ref|YP_004039279.1| riboflavin biosynthesis protein ribd [Methylovorus sp. MP688]
 gi|312439937|gb|ADQ84043.1| riboflavin biosynthesis protein RibD [Methylovorus sp. MP688]
          Length = 368

 Score =  104 bits (260), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 37/157 (23%), Positives = 58/157 (36%), Gaps = 25/157 (15%)

Query: 4   GNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
            +  M+ AL  A+        P   VG V V + +I+    +          HAE+ A+R
Sbjct: 6   DHQMMARALRLAEQGLYTT-TPNPRVGCVIVKDGQIVGEGAHLKAGE----PHAEVHALR 60

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
               +         D YVTLEPC        CA A+  A ++R+     +P      +G 
Sbjct: 61  QAGDLAQ-----GADAYVTLEPCSHHGRTPPCADALIKAGVKRVVAAMQDPNPQVAGSGL 115

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE--RR 149
           Q            +  G+ E ++R +   F     RR
Sbjct: 116 QRLQAQG----IAVQSGLLEAQARSLNAGFISRMTRR 148


>gi|33323001|gb|AAQ07237.1|AF496545_1 hypothetical protein [Lactobacillus delbrueckii subsp. lactis]
          Length = 89

 Score =  104 bits (260), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 27/73 (36%), Positives = 47/73 (64%)

Query: 77  YVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQR 136
           +VTLEPC MCA AI  +RI+ +Y+ A +PK G   +    +++   +H PE+  G+ +++
Sbjct: 1   FVTLEPCAMCAGAIINSRIKEVYFAAMDPKAGAAGSVVDLFSVEKFNHHPEVIRGLYKEQ 60

Query: 137 SRQIIQDFFKERR 149
              +++DFF+E R
Sbjct: 61  GALLLKDFFREIR 73


>gi|254823485|ref|ZP_05228486.1| CMP/dCMP deaminase, zinc-binding protein [Mycobacterium
           intracellulare ATCC 13950]
          Length = 143

 Score =  104 bits (260), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 37/142 (26%), Positives = 55/142 (38%), Gaps = 13/142 (9%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +  A EEA++      IP+GA     +  ++ R  NR  +  D + HAE+ A R   R  
Sbjct: 2   LDVAFEEARSGLAEGGIPIGAALFTADGVLLGRGRNRRVQQGDPSLHAEVDAFRAAGR-- 59

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
            Q       +  TL PC  C+  +    I  L  G S    GG E   Q        H  
Sbjct: 60  -QRDYRSTVMVTTLSPCWYCSGLVRQFNIGALVVGESRTFTGGHEWLAQ--------HGV 110

Query: 127 EIYPGISEQRSRQIIQDFFKER 148
            +   + + R  Q++  F  E 
Sbjct: 111 TVTV-VDDPRCTQMMSAFIAEH 131


>gi|302390233|ref|YP_003826054.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase
           ;5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Thermosediminibacter oceani DSM 16646]
 gi|302200861|gb|ADL08431.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase
           ;5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Thermosediminibacter oceani DSM 16646]
          Length = 373

 Score =  104 bits (260), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 34/130 (26%), Positives = 51/130 (39%), Gaps = 17/130 (13%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           M++   FM  AL+ A+         P VGAV V + +I+    +R         HAE+ A
Sbjct: 1   MERDVFFMRRALDLAKKGRGTTSPNPMVGAVVVKDGEIVGEGYHRKAGE----PHAEVEA 56

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
           +         E     +LYV LEPC        CA  I  A ++R+    ++P       
Sbjct: 57  LAQAA-----ERARGAELYVNLEPCCHYGRTPPCADTIIRAGVKRVVAAMADPNPLVAGK 111

Query: 113 GTQFYTLATC 122
           G +    A  
Sbjct: 112 GIKRLKEAGI 121


>gi|223043509|ref|ZP_03613554.1| riboflavin biosynthesis protein RibD [Staphylococcus capitis SK14]
 gi|222442997|gb|EEE49097.1| riboflavin biosynthesis protein RibD [Staphylococcus capitis SK14]
          Length = 349

 Score =  104 bits (260), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 37/151 (24%), Positives = 64/151 (42%), Gaps = 24/151 (15%)

Query: 7   FMSCALEEAQNAALRNEI--PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           FM+ A++ A+    +  I  PVG+V V + +I+    +  +  K    HAE+ A+ M   
Sbjct: 4   FMNYAIQLAKMVDGQTGINPPVGSVVVKDGRIVGLGAHLKKGDK----HAEVQALDMAG- 58

Query: 65  ILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
               E   +  +YV+LEPC        C   I    IR++ Y   +        G +   
Sbjct: 59  ----EDAKDATIYVSLEPCTHHGSTPPCVNKIIEFGIRKVIYAVKDTTL--ASKGDEILK 112

Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
            A      E+    +E  + ++ +DFF  +R
Sbjct: 113 EAG----IEVEFQFNEN-AAELYKDFFTAKR 138


>gi|296455801|gb|ADH22036.1| cytosine deaminase [synthetic Mycoplasma mycoides JCVI-syn1.0]
          Length = 155

 Score =  104 bits (260), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 43/150 (28%), Positives = 70/150 (46%), Gaps = 4/150 (2%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAI 59
           M   N  +   + +++ A   N+IPV    +  NN I+S + N   + K+++ HAEI AI
Sbjct: 9   MNDFNNILDLMIYQSKKAIKHNDIPVCCCIIDSNNNILSMSINTRYKNKNISQHAEINAI 68

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
                 L+   L E  L  TLEPC MC +AI   +I  +YY   + K G I+N       
Sbjct: 69  NKLINKLNTFNLSEYKLITTLEPCMMCYSAIKQVKINTIYYLVDSYKFG-IQNNYSI-ND 126

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
              +   +I     +    +++ +FF  +R
Sbjct: 127 QNLN-LIQIKNHNKQSEYIKLLNNFFINKR 155


>gi|256383711|gb|ACU78281.1| cytosine deaminase [Mycoplasma mycoides subsp. capri str. GM12]
 gi|256384542|gb|ACU79111.1| cytosine deaminase [Mycoplasma mycoides subsp. capri str. GM12]
          Length = 147

 Score =  104 bits (260), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 43/150 (28%), Positives = 70/150 (46%), Gaps = 4/150 (2%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAI 59
           M   N  +   + +++ A   N+IPV    +  NN I+S + N   + K+++ HAEI AI
Sbjct: 1   MNDFNNILDLMIYQSKKAIKHNDIPVCCCIIDSNNNILSMSINTRYKNKNISQHAEINAI 60

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
                 L+   L E  L  TLEPC MC +AI   +I  +YY   + K G I+N       
Sbjct: 61  NKLINKLNTFNLSEYKLITTLEPCMMCYSAIKQVKINTIYYLVDSYKFG-IQNNYSI-ND 118

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
              +   +I     +    +++ +FF  +R
Sbjct: 119 QNLN-LIQIKNHNKQSEYIKLLNNFFINKR 147


>gi|324328017|gb|ADY23277.1| riboflavin biosynthesis protein RibD [Bacillus thuringiensis
           serovar finitimus YBT-020]
          Length = 370

 Score =  104 bits (260), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 35/158 (22%), Positives = 60/158 (37%), Gaps = 24/158 (15%)

Query: 3   KGNVFMSCALEEAQ-NAALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
               +M  AL+ A+  +   +  P VGAV V +  I+    +     +    HAE+ A+ 
Sbjct: 2   TDQEYMRIALQLAEGTSGQTSPNPMVGAVVVKDGNIVGMGAHLRAGEE----HAEVHALH 57

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           M              +YVTLEPC        C  ++    ++R+     +       NG 
Sbjct: 58  MAGEKA-----KGATVYVTLEPCSHFGKTPPCCESLIKKEVKRVVIATLDCNPLVSGNGK 112

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF---KERR 149
           +    A      E+  G+ E  +  + + FF   K +R
Sbjct: 113 RRLEEAG----IEVTTGVLEAEAVLLNRYFFHYMKTKR 146


>gi|134107133|ref|XP_777879.1| hypothetical protein CNBA5760 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|50260577|gb|EAL23232.1| hypothetical protein CNBA5760 [Cryptococcus neoformans var.
           neoformans B-3501A]
          Length = 165

 Score =  104 bits (260), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 35/145 (24%), Positives = 61/145 (42%), Gaps = 12/145 (8%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVL--NNKIISRAGNRNRELKDVTAHAEILAI 59
           +    FMS A E+A  +     IP+GA  V    ++IISR  N   +L     H E+  +
Sbjct: 12  EDYPHFMSVAHEQALKSLSEGGIPIGAALVHLPTSRIISRGHNNRVQLSSNVRHGEMDCL 71

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
               R+    +L E  ++ TL PC MC+A   L +IR +    +    GG     Q    
Sbjct: 72  ENLGRVPEG-LLSECAMFTTLSPCIMCSATCILYKIRTVVLAENENFVGG----EQLLRD 126

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDF 144
              +        +  +  + +++++
Sbjct: 127 NGAN-----VINLDSEEIKNMMKNW 146


>gi|145298017|ref|YP_001140858.1| pyrimidine deaminase/reductase RibD [Aeromonas salmonicida subsp.
           salmonicida A449]
 gi|142850789|gb|ABO89110.1| pyrimidine deaminase/reductase RibD [Aeromonas salmonicida subsp.
           salmonicida A449]
          Length = 369

 Score =  104 bits (260), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 36/156 (23%), Positives = 55/156 (35%), Gaps = 21/156 (13%)

Query: 2   KKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
           +    +M+ ALE A+         P VGAV V    ++    ++         HAEI A+
Sbjct: 4   QDDYQWMNRALELARRGRYTTAPNPCVGAVLVKAGVVVGEGWHKRAGE----PHAEIYAL 59

Query: 60  RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113
                    +       YVTLEPC        CA A+  A + R+     +P       G
Sbjct: 60  HEAG-----DEARGATAYVTLEPCSHHGRTPPCAEALIKAGVTRVVAAMVDPNPEVGGRG 114

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +  + A          G+    +  +   FFK  R
Sbjct: 115 LRMLSEAGIKTDF----GLLSSEAEALNPGFFKRMR 146


>gi|171463092|ref|YP_001797205.1| riboflavin biosynthesis protein RibD [Polynucleobacter necessarius
           subsp. necessarius STIR1]
 gi|171192630|gb|ACB43591.1| riboflavin biosynthesis protein RibD [Polynucleobacter necessarius
           subsp. necessarius STIR1]
          Length = 372

 Score =  104 bits (260), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 43/149 (28%), Positives = 61/149 (40%), Gaps = 18/149 (12%)

Query: 4   GNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
            + FMS AL EAQ A  L N  P VG V     KII R   +        AHAE+ A+  
Sbjct: 6   DHQFMSEALSEAQKALYLSNPNPRVGCVIAKEGKIIGRGFTQAAGK----AHAEVQALAD 61

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
                +        +YVTLEPC        C  A+  A+  ++    S+P       G +
Sbjct: 62  AKARGN--DATGSTIYVTLEPCSHTGKTPPCVDALIAAKPSKVIVAMSDPNPLVAGQGLE 119

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDF 144
              LA      E+  G+ E  ++ + + F
Sbjct: 120 KLKLAG----IEVQYGLMESEAQLLNRGF 144


>gi|294930369|ref|XP_002779543.1| cytidine deaminase, putative [Perkinsus marinus ATCC 50983]
 gi|239888855|gb|EER11338.1| cytidine deaminase, putative [Perkinsus marinus ATCC 50983]
          Length = 111

 Score =  103 bits (259), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 34/94 (36%), Positives = 47/94 (50%), Gaps = 1/94 (1%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
               FM  AL  AQ A   +E+PVG   V N  +++ AGN     ++ T HAE++A    
Sbjct: 18  DDKRFMRVALAAAQEAYDTDEVPVGCAFVSNGVVLATAGNETNHTRNATRHAELVATDKI 77

Query: 63  CRILSQEI-LPEVDLYVTLEPCTMCAAAISLARI 95
                    +    LYVT+EPC MCAAA+ +  I
Sbjct: 78  YDKYKSCDAIRHSTLYVTVEPCVMCAAALHILGI 111


>gi|194333661|ref|YP_002015521.1| riboflavin biosynthesis protein RibD [Prosthecochloris aestuarii
           DSM 271]
 gi|194311479|gb|ACF45874.1| riboflavin biosynthesis protein RibD [Prosthecochloris aestuarii
           DSM 271]
          Length = 373

 Score =  103 bits (259), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 38/152 (25%), Positives = 64/152 (42%), Gaps = 19/152 (12%)

Query: 3   KGNVFMSCALEEAQN-AALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +   +M   LE A+  A L +  P VG+V V+ ++++    +          HAE+ A+ 
Sbjct: 10  RDEYYMHRCLELARKGAGLVSPNPMVGSVIVVEDRVVGEGFHERYGG----PHAEVNAL- 64

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
               +    +LP   LYV LEPC        C+  I   +IRR+  G  +P       G 
Sbjct: 65  --ASVSDASLLPSSTLYVNLEPCSHYGKTPPCSDLIISKKIRRVVVGCLDPHEKVAGKGI 122

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
           +    A      E+  G+ ++ S  + + F K
Sbjct: 123 EKLRQAG----VEVTIGVLQRESEALNEAFIK 150


>gi|159029666|emb|CAO87744.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
          Length = 386

 Score =  103 bits (259), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 42/149 (28%), Positives = 54/149 (36%), Gaps = 21/149 (14%)

Query: 4   GNVFMSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
               M   L  A+ A  R    P VG+V V    II    +          HAE+LA+R 
Sbjct: 29  DRKMMQRCLTLARQALGRTSPNPLVGSVIVQEGIIIGEGFH----PGAGQPHAEVLALRQ 84

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
                         LYV LEPC        C+ AI  A I+++  G  +P       G Q
Sbjct: 85  AAEKA-----RGATLYVNLEPCNHYGRTPPCSEAIVRAGIKKVVVGMIDPNPLVAGKGIQ 139

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDF 144
               A      E   G+ E   RQ+ Q F
Sbjct: 140 RLASAG----IETLVGVEESECRQVNQGF 164


>gi|21230168|ref|NP_636085.1| riboflavin-specific deaminase/5-amino-6-uracil reductase
           [Xanthomonas campestris pv. campestris str. ATCC 33913]
 gi|66769842|ref|YP_244604.1| riboflavin-specific deaminase/5-amino-6-uracil reductase
           [Xanthomonas campestris pv. campestris str. 8004]
 gi|188993059|ref|YP_001905069.1| Riboflavin biosynthesis protein RibD
           (Diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-[5-phosphoribosylamino]uracil
           reductase) [Xanthomonas campestris pv. campestris str.
           B100]
 gi|21111703|gb|AAM40009.1| riboflavin-specific deaminase/5-amino-6-uracil reductase
           [Xanthomonas campestris pv. campestris str. ATCC 33913]
 gi|66575174|gb|AAY50584.1| riboflavin-specific deaminase/5-amino-6-uracil reductase
           [Xanthomonas campestris pv. campestris str. 8004]
 gi|167734819|emb|CAP53029.1| Riboflavin biosynthesis protein RibD
           (Diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-[5-phosphoribosylamino]uracil
           reductase) [Xanthomonas campestris pv. campestris]
          Length = 364

 Score =  103 bits (259), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 36/150 (24%), Positives = 58/150 (38%), Gaps = 21/150 (14%)

Query: 3   KGNVFMSCALEEAQN-AALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
             + +M+ AL  A+  A      P VG V V +   +    ++         HAE+ A+R
Sbjct: 6   DNHRWMAQALRLAERGAYTTRPNPMVGCVIVRDGACVGEGFHQRAGG----PHAEVFALR 61

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
                   E       YVTLEPC        CA A+  A + R+    ++P       G 
Sbjct: 62  AAG-----EQARGATAYVTLEPCAHYGRTPPCALALIAAGVTRVVAAMADPFPQVNGGGF 116

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
                A      +++ G+ E ++R + Q F
Sbjct: 117 TLLRDAG----IQVHSGVMEAQARALNQGF 142


>gi|229098580|ref|ZP_04229521.1| RibD (Riboflavin-specific deaminase) [Bacillus cereus Rock3-29]
 gi|228684902|gb|EEL38839.1| RibD (Riboflavin-specific deaminase) [Bacillus cereus Rock3-29]
          Length = 379

 Score =  103 bits (259), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 35/158 (22%), Positives = 59/158 (37%), Gaps = 24/158 (15%)

Query: 3   KGNVFMSCALEEAQ-NAALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
               +M  AL+ A+  +   +  P VGAV V +  I+    +     +    HAE+ A+ 
Sbjct: 11  TDQEYMRIALQLAKGTSGQTSPNPMVGAVVVKDGNIVGMGAHLRAGEE----HAEVHALH 66

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           M              +YVTLEPC        C   +    ++R+     +       NG 
Sbjct: 67  MAGEKAKN-----ATVYVTLEPCSHFGKTPPCCELLIEKGVKRIVIATLDCNPLVSGNGK 121

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF---KERR 149
           +    A      E+  G+ E  +  + + FF   K +R
Sbjct: 122 KKLEEAG----IEVTTGVLETEAVLLNRYFFHYMKTKR 155


>gi|312898694|ref|ZP_07758084.1| riboflavin biosynthesis protein RibD [Megasphaera micronuciformis
           F0359]
 gi|310620613|gb|EFQ04183.1| riboflavin biosynthesis protein RibD [Megasphaera micronuciformis
           F0359]
          Length = 371

 Score =  103 bits (259), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 35/148 (23%), Positives = 57/148 (38%), Gaps = 21/148 (14%)

Query: 8   MSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M  AL  A+         P VG V V + +I+ R  +     +  T HAE+ A+R     
Sbjct: 1   MEEALNLARMGLGYTSPNPTVGCVIVKDGEIVGRGYHH----QAGTPHAEVWALREA--- 53

Query: 66  LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
             +E      +YVTLEPC        CA A+  A + ++     +P       G      
Sbjct: 54  --KEKAKGATVYVTLEPCAHYGKTPPCARALVKAGVAKVVCAMLDPNPLVAGKGAAILRN 111

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKE 147
           A       +  G+  + + ++ + F K 
Sbjct: 112 AGIP----VIVGLMSKEAVKMNEVFIKN 135


>gi|297569249|ref|YP_003690593.1| riboflavin biosynthesis protein RibD [Desulfurivibrio alkaliphilus
           AHT2]
 gi|296925164|gb|ADH85974.1| riboflavin biosynthesis protein RibD [Desulfurivibrio alkaliphilus
           AHT2]
          Length = 368

 Score =  103 bits (259), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 38/146 (26%), Positives = 57/146 (39%), Gaps = 22/146 (15%)

Query: 3   KGNVFMSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
               +M  ALE A+    +    P VGAV V + +++ R  +R         HAEI    
Sbjct: 5   TDQAYMKMALELARKGVGKTSPNPCVGAVLVKDGQVVGRGWHRRAGE----PHAEIN--- 57

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
                 + ++     +YVTLEPC        C+ AI  A IRR+ YG S+P         
Sbjct: 58  --ALAAAGDLAGGATIYVTLEPCNHQGRTPPCSKAIEAAGIRRVVYGMSDPNP-----VA 110

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQI 140
                       E+  G+     R++
Sbjct: 111 GGGGAYLAGRGLEVLAGVLADDCRRL 136


>gi|83955709|ref|ZP_00964289.1| riboflavin biosynthesis protein RibD [Sulfitobacter sp. NAS-14.1]
 gi|83840003|gb|EAP79179.1| riboflavin biosynthesis protein RibD [Sulfitobacter sp. NAS-14.1]
          Length = 367

 Score =  103 bits (259), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 36/155 (23%), Positives = 53/155 (34%), Gaps = 25/155 (16%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56
           M     FM+ AL   +    +  +   P VG V V   +I+ R   +         HAE 
Sbjct: 1   MSDDARFMALALSLGRRG--QGAVWPNPAVGCVIVQQGRIVGRGWTQPGGR----PHAEP 54

Query: 57  LAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGI 110
            A+R               +YVTLEPC        CA A+  A+  R+    ++      
Sbjct: 55  QALRQAGPAAQ-----GATVYVTLEPCAHTGKTPPCADALVAAKPARVVIACTDRDPRVS 109

Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
             G      A       +  G+ E  +R     FF
Sbjct: 110 GKGIAILRAAG----IIVDVGVLEDEARADHLGFF 140


>gi|298488889|ref|ZP_07006913.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase /
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Pseudomonas savastanoi pv. savastanoi NCPPB 3335]
 gi|298156564|gb|EFH97660.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase /
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Pseudomonas savastanoi pv. savastanoi NCPPB 3335]
          Length = 366

 Score =  103 bits (259), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 36/148 (24%), Positives = 55/148 (37%), Gaps = 21/148 (14%)

Query: 8   MSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M+ ALE A+N          VG V V + +I+    +          HAE+ A+R    +
Sbjct: 1   MARALELARNGLYSTHPNPRVGCVIVRDGQIVGEGWHVRAGE----PHAEVHALRQAGEL 56

Query: 66  LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
                      YVTLEPC        CA A+  A + R+     +P       G     L
Sbjct: 57  A-----RGATAYVTLEPCSHQGRTPPCADALVNAGLARVVAAMQDPNPDVSGRGL----L 107

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKE 147
              +    +  G+ E  +R + + F K 
Sbjct: 108 RLMNAGIGVQCGVLESEARALNKGFLKR 135


>gi|90406961|ref|ZP_01215152.1| Putative pyrimidine deaminase/pyrimidine reductase [Psychromonas
           sp. CNPT3]
 gi|90312003|gb|EAS40097.1| Putative pyrimidine deaminase/pyrimidine reductase [Psychromonas
           sp. CNPT3]
          Length = 381

 Score =  103 bits (259), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 37/151 (24%), Positives = 60/151 (39%), Gaps = 21/151 (13%)

Query: 2   KKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
           ++   +MS ALE A+         P VG V VL++ ++    +          HAE+ A+
Sbjct: 8   EQDKEYMSRALELAKKGRFTSAPNPNVGCVIVLDDIVVGTGFHFKAGQG----HAEVYAL 63

Query: 60  RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113
            M               YVTLEPC        CA A+  A ++R+     +P       G
Sbjct: 64  AMAGSKAQS-----STCYVTLEPCSHFGRTPPCALALIKAGVKRVCVAMRDPNPQVAGQG 118

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
            +    A      E+  G+ E +++Q+   F
Sbjct: 119 IKLLQDAG----IEVSVGLLEPQAKQLNLGF 145


>gi|288941195|ref|YP_003443435.1| CMP/dCMP deaminase protein [Allochromatium vinosum DSM 180]
 gi|288896567|gb|ADC62403.1| CMP/dCMP deaminase zinc-binding protein [Allochromatium vinosum DSM
           180]
          Length = 189

 Score =  103 bits (259), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 34/149 (22%), Positives = 55/149 (36%), Gaps = 12/149 (8%)

Query: 8   MSCALEEAQNAALRN-EIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           M+  L+ A+       + P  A      + ++I+   NR        AHAE++AI +  +
Sbjct: 33  MALVLDLARENIRAGADGPFSAAIFERRSGRLIAAGVNRVVSSGCSIAHAEMVAIGIAQQ 92

Query: 65  ILSQEILP-----EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
            L    L         L+ + EPC MC  AI  + I R+  GA +     I         
Sbjct: 93  RLGSFDLRQAVPGGCVLFTSAEPCAMCMGAIPWSGIERVVIGARDSDVRAIGFDEGHKPA 152

Query: 120 ATC----HHSPEIYPGISEQRSRQIIQDF 144
                      E+   +    S QI+ D+
Sbjct: 153 DWIAGYAQRGIEVTRDLLRAESAQILWDY 181


>gi|254466662|ref|ZP_05080073.1| guanine deaminase [Rhodobacterales bacterium Y4I]
 gi|206687570|gb|EDZ48052.1| guanine deaminase [Rhodobacterales bacterium Y4I]
          Length = 164

 Score =  103 bits (259), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 32/113 (28%), Positives = 45/113 (39%), Gaps = 5/113 (4%)

Query: 5   NVFMS--CALEEAQNAALRNEIPVGA-VAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
              M    AL EA+ A     +P  A V   + +++    N   E  D TAHAE+ AIR 
Sbjct: 12  ERLMQDVVALSEARVA--EGGVPFSAQVVSADGRVLGAGVNTVMEDHDPTAHAEVCAIRD 69

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGT 114
            C    +  L    L  + EPC +C  A   A +  + Y  S  +      G 
Sbjct: 70  ACARHGRTNLAGTVLLASGEPCALCYMAALFAGVSEVLYAVSADEAARYGYGY 122


>gi|91087043|ref|XP_974513.1| PREDICTED: similar to cytidine and deoxycytidylate deaminase
           zinc-binding region [Tribolium castaneum]
 gi|270010523|gb|EFA06971.1| hypothetical protein TcasGA2_TC009931 [Tribolium castaneum]
          Length = 317

 Score =  103 bits (259), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 33/175 (18%), Positives = 63/175 (36%), Gaps = 43/175 (24%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLN--NKIISRAGNRNRELKDVTAHAEILA 58
           ++K   FM  A++  +   +R      AV V      +++   +  +E      HA ++A
Sbjct: 150 LEKHAEFMRIAIDICEITGVRES----AVVVDPVGGTVVAFGFDLTQEY--PVKHAVMVA 203

Query: 59  IRMGCR----------------------------------ILSQEILPEVDLYVTLEPCT 84
           I    R                                       +     +Y T EPC 
Sbjct: 204 IDEVARTQKGGVWERHQDYEKIQTFVETKYKNLGFGFSNSAEGPYLCTGYSVYCTTEPCI 263

Query: 85  MCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139
            CA A+  +R +R++YG  + K G + +  + + +   +H  E + G+ E+  R 
Sbjct: 264 TCAMALVHSRAKRVFYGVKSAK-GALGSLCKIHVVENLNHHYEAFSGLLEEECRA 317


>gi|28199619|ref|NP_779933.1| riboflavin-specific deaminase [Xylella fastidiosa Temecula1]
 gi|182682363|ref|YP_001830523.1| riboflavin biosynthesis protein RibD [Xylella fastidiosa M23]
 gi|28057734|gb|AAO29582.1| riboflavin-specific deaminase [Xylella fastidiosa Temecula1]
 gi|182632473|gb|ACB93249.1| riboflavin biosynthesis protein RibD [Xylella fastidiosa M23]
 gi|307578645|gb|ADN62614.1| riboflavin biosynthesis protein RibD [Xylella fastidiosa subsp.
           fastidiosa GB514]
          Length = 364

 Score =  103 bits (259), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 35/150 (23%), Positives = 56/150 (37%), Gaps = 21/150 (14%)

Query: 3   KGNVFMSCALEEAQN-AALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
             +  M  AL  A+  A      P VG V V + +++    ++     D   HAE+ A+ 
Sbjct: 7   DDHRHMERALCLAERGAYTTRPNPMVGCVIVRDGEVVGEGWHQR--AGDP--HAEVFALC 62

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
                   +       YVTLEPC        CA A+  A +RR+     +P       G 
Sbjct: 63  AAG-----DRARGATAYVTLEPCAHSGRTPPCAMALIDAGVRRVVAAMVDPFPLVNGGGV 117

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
                A       +  G+ E ++R + + F
Sbjct: 118 TLLRAAG----VTVEHGLMEAQARALNRGF 143


>gi|163792387|ref|ZP_02186364.1| hypothetical protein BAL199_16108 [alpha proteobacterium BAL199]
 gi|159182092|gb|EDP66601.1| hypothetical protein BAL199_16108 [alpha proteobacterium BAL199]
          Length = 163

 Score =  103 bits (259), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 30/152 (19%), Positives = 52/152 (34%), Gaps = 11/152 (7%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRM 61
                +  ALE A+ A    + P G+V V  +  +++   NR     D T H E    R 
Sbjct: 5   TDLKHLRRALELAREALEAGDAPFGSVLVASDGTVLAEDRNRT-GGGDRTRHPEFALARW 63

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG-------ASNPKGGGIENGT 114
               +     P   +Y + E C MCAAA     + R+ Y        A     G   +  
Sbjct: 64  AAENMKPADRPGATVYTSGEHCPMCAAAHGFVGLGRIVYAGSSGQLVAWRADFGAAPSPV 123

Query: 115 QFYTLATCHHSPEIYPGI--SEQRSRQIIQDF 144
           +   +        +   +       R++ + +
Sbjct: 124 RALPIREVVPGLTVEGPVPELADELREMHRRY 155


>gi|257869314|ref|ZP_05648967.1| riboflavin-specific deaminase [Enterococcus gallinarum EG2]
 gi|257803478|gb|EEV32300.1| riboflavin-specific deaminase [Enterococcus gallinarum EG2]
          Length = 359

 Score =  103 bits (259), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 38/149 (25%), Positives = 59/149 (39%), Gaps = 23/149 (15%)

Query: 4   GNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
              +M  A+ EA     + +    P VGAV V + +I++   +          HAE  AI
Sbjct: 2   HETYMKRAISEALKG--KGQTFTNPLVGAVIVKDEEIVAVGSHM--AYGQP--HAEKNAI 55

Query: 60  RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113
                  S E L +  +YVTLEPC        C  AI  + I+++  G  +P       G
Sbjct: 56  DSCS---SPEKLIDSTIYVTLEPCHHYGKQPPCTTAILQSGIKKVVIGQLDPNPLVSGKG 112

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQ 142
             F           +  G+ E+  R+I +
Sbjct: 113 KAFLESQG----VAVITGVLEKEVREINR 137


>gi|256080812|ref|XP_002576670.1| cytidine/deoxycytidylate deaminase-related [Schistosoma mansoni]
 gi|238661949|emb|CAZ32907.1| cytidine/deoxycytidylate deaminase-related [Schistosoma mansoni]
          Length = 89

 Score =  103 bits (259), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 38/89 (42%), Positives = 49/89 (55%), Gaps = 6/89 (6%)

Query: 8  MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR---MGCR 64
          M  A E A  A   NE+PVG   V N ++I+   N     +D T HAE++ IR     CR
Sbjct: 1  MDIAFELACEALRCNEVPVGCAFVYNGEVIASGRNEVNATRDATQHAEMVTIRRLEQWCR 60

Query: 65 ILSQE---ILPEVDLYVTLEPCTMCAAAI 90
             +E   IL E DL+VT+EPC MC AA+
Sbjct: 61 NNQKELDKILVECDLFVTVEPCIMCTAAV 89


>gi|94985175|ref|YP_604539.1| CMP/dCMP deaminase, zinc-binding [Deinococcus geothermalis DSM
           11300]
 gi|94555456|gb|ABF45370.1| CMP/dCMP deaminase, zinc-binding protein [Deinococcus geothermalis
           DSM 11300]
          Length = 187

 Score =  103 bits (258), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 36/136 (26%), Positives = 55/136 (40%), Gaps = 13/136 (9%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDV-------TAHA 54
               ++  AL  A+ A      PVGAV V    ++I+R  NR  E +          AHA
Sbjct: 15  THRPYLQEALRLAREAQAAGSAPVGAVLVNAAGEVIARGRNRVGEAQTPEHVGAASVAHA 74

Query: 55  EILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           E+       ++     L    LY +LEPC MC  A +L  + R+ +   +P  GG     
Sbjct: 75  EMDVFFSVGKVQDAATL---TLYTSLEPCLMCGGAAALLEVGRVVWATDDPW-GGSGRLI 130

Query: 115 QFYTLATCHHSPEIYP 130
           ++          E+ P
Sbjct: 131 KWSEHPAM-QDTEVVP 145


>gi|88799403|ref|ZP_01114981.1| hypothetical protein MED297_17393 [Reinekea sp. MED297]
 gi|88777942|gb|EAR09139.1| hypothetical protein MED297_17393 [Reinekea sp. MED297]
          Length = 161

 Score =  103 bits (258), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 31/102 (30%), Positives = 46/102 (45%), Gaps = 4/102 (3%)

Query: 3   KGNVFMSCA---LEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILA 58
                M  A   +  A +    + +P  A+ V  N +II +  N+  +  D TAHAEI A
Sbjct: 6   SDEFLMEYADKVINLAISNVKEDGLPFAAIVVDQNGEIIGKGVNQVAKHLDCTAHAEIQA 65

Query: 59  IRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
           IR          L  + L V+ EPC +C  AI +A I ++  
Sbjct: 66  IREASGNEKTVSLKGMILIVSGEPCALCYMAIRMAEIMKVVI 107


>gi|228935432|ref|ZP_04098250.1| RibD (Riboflavin-specific deaminase) [Bacillus thuringiensis
           serovar andalousiensis BGSC 4AW1]
 gi|228824184|gb|EEM69998.1| RibD (Riboflavin-specific deaminase) [Bacillus thuringiensis
           serovar andalousiensis BGSC 4AW1]
          Length = 379

 Score =  103 bits (258), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 34/158 (21%), Positives = 56/158 (35%), Gaps = 24/158 (15%)

Query: 3   KGNVFMSCALEEAQN--AALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
               +M  AL+ A+           VGAV V +  I+    +     +    HAE+ A+ 
Sbjct: 11  TDQEYMRIALQLAEETCGQTSPNPMVGAVVVKDGNIVGMGAHLRAGEE----HAEVHALH 66

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           M              +YVTLEPC        C   +    ++R+     +       NG 
Sbjct: 67  MAGDKA-----KGATVYVTLEPCSHFGKTPPCCELLIKKEVKRVVIATLDCNPLVSGNGK 121

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF---KERR 149
           +    A      E+  G+ E  +  + + FF   K +R
Sbjct: 122 RKLEEAG----IEVTTGVLEAEAVLLNRYFFHYMKTKR 155


>gi|314933920|ref|ZP_07841285.1| riboflavin biosynthesis protein RibD [Staphylococcus caprae C87]
 gi|313654070|gb|EFS17827.1| riboflavin biosynthesis protein RibD [Staphylococcus caprae C87]
          Length = 349

 Score =  103 bits (258), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 38/151 (25%), Positives = 64/151 (42%), Gaps = 24/151 (15%)

Query: 7   FMSCALEEAQNAALRNEI--PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           FM+ A++ AQ    +  I  PVG+V V + +I+    +  +  K    HAE+ A+ M   
Sbjct: 4   FMNYAIQLAQMVDGQTGINPPVGSVVVKDGRIVGLGAHLKKGDK----HAEVQALDMAG- 58

Query: 65  ILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
               E   +  +YV+LEPC        C   I    IR++ Y   +        G +   
Sbjct: 59  ----ENAKDATIYVSLEPCTHHGSTPPCVNKIIEFGIRKVIYAVKDTTL--ASKGDEILK 112

Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
            A      E+    +E  + ++ +DFF  +R
Sbjct: 113 EAG----IEVEFQFNEN-AAELYKDFFTAKR 138


>gi|224824436|ref|ZP_03697543.1| riboflavin biosynthesis protein RibD [Lutiella nitroferrum 2002]
 gi|224602929|gb|EEG09105.1| riboflavin biosynthesis protein RibD [Lutiella nitroferrum 2002]
          Length = 364

 Score =  103 bits (258), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 35/150 (23%), Positives = 57/150 (38%), Gaps = 23/150 (15%)

Query: 4   GNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
            +  M+ AL  A+        P   VG V V + +++    +    +   T HAE+ A+R
Sbjct: 7   DHAMMAQALRLAEQGLYTT-TPNPRVGCVVVRDGEVVGEGWH----IAAGTPHAEVHALR 61

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           M   +           YVTLEPC        CA  +  A + R+     +P       G 
Sbjct: 62  MAGELA-----RGATAYVTLEPCSHYGRTPPCAKGLIEAGVGRVVAAMQDPYHEVAGRGL 116

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
                A      E+  G+ E  +R++ + F
Sbjct: 117 DMLRAAG----IEVAVGLLEAEARRLNKGF 142


>gi|119025436|ref|YP_909281.1| riboflavin biosynthesis protein RibD [Bifidobacterium adolescentis
           ATCC 15703]
 gi|118765020|dbj|BAF39199.1| riboflavin biosynthesis protein RibD [Bifidobacterium adolescentis
           ATCC 15703]
          Length = 317

 Score =  103 bits (258), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 36/156 (23%), Positives = 57/156 (36%), Gaps = 21/156 (13%)

Query: 1   MKKGNVF---MSCALEEAQN-AALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAE 55
           M+    +   M+ ALE A+  A   +  P VGAV V + ++++   +          HAE
Sbjct: 39  MEDMLQYRESMAQALELARKGAGWVDPNPLVGAVVVRDGEVLATGYHDRYRG----PHAE 94

Query: 56  ILAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGG 109
            +A            L    +  TLEPC        C A I    I R+  G+ +P    
Sbjct: 95  RMAFDYADAH--GIDLTGATVIDTLEPCCHVGSQPACTALILAHGIARVVVGSVDPNPIV 152

Query: 110 IENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
              G +    A      E+   +  +    I + FF
Sbjct: 153 AGKGLRILEEAG----VEVVRDVMREECDAINRHFF 184


>gi|66047689|ref|YP_237530.1| riboflavin biosynthesis protein RibD:riboflavin-specific deaminase,
           C-terminal [Pseudomonas syringae pv. syringae B728a]
 gi|63258396|gb|AAY39492.1| Riboflavin biosynthesis protein RibD:Riboflavin-specific deaminase,
           C-terminal [Pseudomonas syringae pv. syringae B728a]
          Length = 366

 Score =  103 bits (258), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 35/148 (23%), Positives = 53/148 (35%), Gaps = 21/148 (14%)

Query: 8   MSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M+ ALE A+           VG V V   +I+    +          HAE+ A+R    +
Sbjct: 1   MARALELARKGLYSTHPNPRVGCVIVREGRIVGEGWHARAGE----PHAEVHALRQAGEL 56

Query: 66  LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
                      YVTLEPC        CA A+  A + R+     +P       G     L
Sbjct: 57  A-----RGATAYVTLEPCSHQGRTPPCADALIEAGLTRVVAAMQDPNPEVSGRGL----L 107

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKE 147
              +    +  G+ E  +R + + F K 
Sbjct: 108 RLMNAGIGVQCGVLESEARALNKGFLKR 135


>gi|114045649|ref|YP_736199.1| CMP/dCMP deaminase, zinc-binding protein [Shewanella sp. MR-7]
 gi|113887091|gb|ABI41142.1| CMP/dCMP deaminase, zinc-binding protein [Shewanella sp. MR-7]
          Length = 157

 Score =  103 bits (258), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 36/89 (40%), Positives = 46/89 (51%), Gaps = 1/89 (1%)

Query: 12  LEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEI 70
           L  AQ       +P  AV V    +I++   NR + L D TAHAEI AIRM   +L Q  
Sbjct: 13  LALAQKEVEGTGLPFSAVIVDESGRIVAEGVNRVQALHDCTAHAEIQAIRMATLLLKQVS 72

Query: 71  LPEVDLYVTLEPCTMCAAAISLARIRRLY 99
           L  + L  + EPC  C  AI LA+I R+ 
Sbjct: 73  LEGMTLIASGEPCGFCYMAIQLAKISRVI 101


>gi|218437502|ref|YP_002375831.1| riboflavin biosynthesis protein RibD [Cyanothece sp. PCC 7424]
 gi|218170230|gb|ACK68963.1| riboflavin biosynthesis protein RibD [Cyanothece sp. PCC 7424]
          Length = 362

 Score =  103 bits (258), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 34/149 (22%), Positives = 60/149 (40%), Gaps = 21/149 (14%)

Query: 4   GNVFMSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
               M   +  A+ AA +    P VGAV V + ++I    +     K    HAE+ A++ 
Sbjct: 6   DREMMQHCINLARQAAGKTSPNPMVGAVIVKDGQVIGEGFH----PKAGQPHAEVFALKQ 61

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
                  E      +Y++LEPC        C  A+  A++ ++  G  +P      +G +
Sbjct: 62  AA-----EQAKGATIYISLEPCNHYGRTPPCTEALIEAQVNKVVIGMIDPDPRVSGSGVK 116

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDF 144
               A      E+  G+ E   R++ + F
Sbjct: 117 RLQEAG----IEVVVGVEEDACRRLNEGF 141


>gi|229492959|ref|ZP_04386754.1| tRNA-specific adenosine deaminase [Rhodococcus erythropolis SK121]
 gi|229319989|gb|EEN85815.1| tRNA-specific adenosine deaminase [Rhodococcus erythropolis SK121]
          Length = 166

 Score =  103 bits (258), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 34/142 (23%), Positives = 61/142 (42%), Gaps = 6/142 (4%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           ++ AL+ A+      E+P+GAV   +++++ RA  + R L     HA++ A+      L 
Sbjct: 9   LAVALDVAREGMELGEMPIGAVVFDDDRVLGRAYTQERALGRRVVHADLQALLQADEALG 68

Query: 68  QEILPE-VDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
                  + L V LEPC MC  A     + R+++   +P  G  E   Q +         
Sbjct: 69  FTRASGELTLAVNLEPCLMCMGAAITLGVTRVWFALESPNDGAAE-LVQLWAPPVELPFF 127

Query: 127 ----EIYPGISEQRSRQIIQDF 144
               E+  GI    +R +  ++
Sbjct: 128 CKPREVLGGIRRDEARNLFAEY 149


>gi|209517119|ref|ZP_03265966.1| riboflavin biosynthesis protein RibD [Burkholderia sp. H160]
 gi|209502512|gb|EEA02521.1| riboflavin biosynthesis protein RibD [Burkholderia sp. H160]
          Length = 383

 Score =  103 bits (258), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 38/151 (25%), Positives = 55/151 (36%), Gaps = 18/151 (11%)

Query: 2   KKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
           +   V M  AL  A+      +  P VG V V N ++I     +         HAEI A+
Sbjct: 4   QTDFVHMERALALAKRGMYTTDPNPRVGCVLVRNGEVIGEGYTQPAGQD----HAEIRAL 59

Query: 60  RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113
           +          L     YVTLEPC        CA A+  A+I R+     +P       G
Sbjct: 60  KDA--RSRGHDLRGATAYVTLEPCSHFGRTPPCANALIEAQIGRVIAAMEDPNPQVSGRG 117

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
                 A      E+  G+    +R++   F
Sbjct: 118 LAMLREAG----IEVRCGLLANEARELNIGF 144


>gi|229025568|ref|ZP_04181976.1| RibD (Riboflavin-specific deaminase) [Bacillus cereus AH1272]
 gi|228735750|gb|EEL86337.1| RibD (Riboflavin-specific deaminase) [Bacillus cereus AH1272]
          Length = 370

 Score =  103 bits (258), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 37/158 (23%), Positives = 61/158 (38%), Gaps = 24/158 (15%)

Query: 3   KGNVFMSCALEEAQ-NAALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
               +M+ AL+ AQ  +   +  P VGAV V + KI+    +     +    HAE+ A+ 
Sbjct: 2   TDQEYMALALQLAQGTSGQTSPNPMVGAVVVKDGKIVGMGAHMCAGEE----HAEVHALH 57

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           M       E      +YVTLEPC        C   +    ++R+     +       NG 
Sbjct: 58  MAG-----ERAKGATVYVTLEPCSHFGKTPPCCELLIEKGVQRVVIATLDCNPLVSGNGK 112

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF---KERR 149
           +           E+  G+ E  +  + + FF   K +R
Sbjct: 113 RRLEETG----IEVTTGVLEAEATLLNRYFFHYMKTKR 146


>gi|71906245|ref|YP_283832.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase /
           diaminohydroxyphosphoribosylaminopyrimidine deaminase
           [Dechloromonas aromatica RCB]
 gi|71845866|gb|AAZ45362.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase /
           diaminohydroxyphosphoribosylaminopyrimidine deaminase
           [Dechloromonas aromatica RCB]
          Length = 367

 Score =  103 bits (258), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 36/149 (24%), Positives = 55/149 (36%), Gaps = 21/149 (14%)

Query: 4   GNVFMSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
            +  M+ AL+ A+         P VG V V + +I+    +          HAE+ A+R 
Sbjct: 7   DHGMMARALQLAERGLWTTSPNPRVGCVLVRDGEIVGEGWHEKAGE----PHAEVHALRS 62

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
                  E       YVTLEPC        CA A+  A + R+    ++P       G  
Sbjct: 63  AG-----ERAKGTTAYVTLEPCSHHGRTPPCAEALIAAGVSRVVAAMTDPNPLVSGKGLA 117

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDF 144
               A      E   G+ E  +R++   F
Sbjct: 118 LLRAAG----IETASGLLENEARELNIGF 142


>gi|313207146|ref|YP_004046323.1| riboflavin biosynthesis protein ribd [Riemerella anatipestifer DSM
           15868]
 gi|312446462|gb|ADQ82817.1| riboflavin biosynthesis protein RibD [Riemerella anatipestifer DSM
           15868]
 gi|315022456|gb|EFT35483.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase [Riemerella
           anatipestifer RA-YM]
 gi|325335416|gb|ADZ11690.1| Pyrimidine deaminase [Riemerella anatipestifer RA-GD]
          Length = 339

 Score =  103 bits (258), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 40/160 (25%), Positives = 66/160 (41%), Gaps = 26/160 (16%)

Query: 3   KGNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
               ++S  +  A+ A  R      P VGAV V N  II    +          HAEI A
Sbjct: 2   SHEKYISRCIALAEKA--RGNTYPNPLVGAVIVHNGIIIGEGYHHKAGE----PHAEINA 55

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
           I     + ++ +L E  +YV+LEPC        CA  I+    +++  G+++        
Sbjct: 56  INS---VENKGLLKESTIYVSLEPCSHFGRTPPCATKITEIGFKKVVIGSADSNEKVSGK 112

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF---KERR 149
           G      A      E+   + E+R R + + FF   +++R
Sbjct: 113 GKAMIEEAG----IEVVDKVLEERCRWLNRRFFTFHEKKR 148


>gi|297275690|ref|XP_001096552.2| PREDICTED: tRNA-specific adenosine deaminase-like protein 3-like
           isoform 2 [Macaca mulatta]
          Length = 367

 Score =  103 bits (258), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 32/155 (20%), Positives = 59/155 (38%), Gaps = 42/155 (27%)

Query: 26  VGAVAVLN--NKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQ--------------- 68
           VGAV V    +++++          +   HA ++ + +  R   +               
Sbjct: 211 VGAVVVDPASDRVLATGH-DCSSADNPLLHAVMVCVDLVARGQGRGTYDFRPFPACSFAP 269

Query: 69  -----------------------EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNP 105
                                   +    DLYVT EPC MCA A+  +RI R++YGA +P
Sbjct: 270 AAAPQAVRAGAVRKLDADEDGLPYVCTGYDLYVTREPCAMCAMALVHSRILRVFYGAPSP 329

Query: 106 KGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140
             G +    + +     +H  +++ G+ E+  R +
Sbjct: 330 D-GALGTRFRIHARPDLNHRFQVFRGVLEEECRWL 363


>gi|166710620|ref|ZP_02241827.1| riboflavin-specific deaminase; 5-amino-6-uracil reductase
           [Xanthomonas oryzae pv. oryzicola BLS256]
          Length = 369

 Score =  103 bits (258), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 35/150 (23%), Positives = 56/150 (37%), Gaps = 21/150 (14%)

Query: 3   KGNVFMSCALEEAQN-AALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
             + +M+ AL  A+  A      P VG V V +   +    ++         HAE+ A+R
Sbjct: 11  DDHRWMAQALRLAERGAYTTRPNPMVGCVIVRDGVCVGEGFHQRAGG----PHAEVFALR 66

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
               +           YVTLEPC        CA A+  A + R+    ++P       G 
Sbjct: 67  AAGELA-----RGATAYVTLEPCAHYGRTPPCALALIEAGVTRVVAAMADPFPQVNGGGF 121

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
                A      E+  G+   ++R + Q F
Sbjct: 122 ALLRDAG----IEVLSGVMHAQARTLNQGF 147


>gi|158315851|ref|YP_001508359.1| CMP/dCMP deaminase zinc-binding [Frankia sp. EAN1pec]
 gi|158111256|gb|ABW13453.1| CMP/dCMP deaminase zinc-binding [Frankia sp. EAN1pec]
          Length = 212

 Score =  103 bits (258), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 34/115 (29%), Positives = 51/115 (44%), Gaps = 5/115 (4%)

Query: 10  CALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDV--TAHAEILAIRMGCRIL 66
            ALE A  + L   + VGA+      +II    N+          AHAE+ A+       
Sbjct: 24  KALEMAWESYLAGGVGVGAILTDSGGRIIGYGRNQRFASASPRLLAHAEMEAL--AALPP 81

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
            ++   +  LY TL PC MC  A+ +ARI ++ +GA +P   GIE+         
Sbjct: 82  GKDRAHDAVLYTTLHPCPMCLGAVVVARIGQVRFGAFDPTWLGIEHLPDLNEEVR 136


>gi|170078074|ref|YP_001734712.1| riboflavin biosynthesis protein RibD [Synechococcus sp. PCC 7002]
 gi|169885743|gb|ACA99456.1| riboflavin biosynthesis protein RibD [Synechococcus sp. PCC 7002]
          Length = 371

 Score =  103 bits (258), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 38/149 (25%), Positives = 55/149 (36%), Gaps = 21/149 (14%)

Query: 4   GNVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
               M   +  A+ AA +      VGAV V + KII    +          HAE+ A+R 
Sbjct: 13  DRAMMQRCITLAKQAAGKTAPNPMVGAVVVQDQKIIGEGFH----PGAGQPHAEVFALRE 68

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
                         LYV+LEPC        C+ A+  A I ++  G  +P       G +
Sbjct: 69  AGAAAQ-----GATLYVSLEPCNHHGRTPPCSQAVVKAGISKVVVGMVDPNPLVAGGGLK 123

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDF 144
             T A      E+  G+ E   R +   F
Sbjct: 124 TLTDAG----IEVVTGVEEAACRALNAGF 148


>gi|262395034|ref|YP_003286888.1| diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Vibrio sp. Ex25]
 gi|262338628|gb|ACY52423.1| diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Vibrio sp. Ex25]
          Length = 375

 Score =  103 bits (258), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 38/154 (24%), Positives = 56/154 (36%), Gaps = 21/154 (13%)

Query: 4   GNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
               MS A++ A+         P VG V V + +I+    +          HAE+ A+RM
Sbjct: 14  DFAMMSRAIKLARRGIYTTAPNPNVGCVIVRDEEIVGEGYHHRAGE----PHAEVHAMRM 69

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
                          YVTLEPC        CA  +  A++ R+     +P       G Q
Sbjct: 70  AGEKA-----VGATAYVTLEPCSHYGRTPPCAEGLIKAKVARVVCAMVDPNPKVAGRGIQ 124

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
               A      E+  G+ EQ +  +   F K  R
Sbjct: 125 MLRDAG----IEVQIGLLEQDALALNPGFIKYMR 154


>gi|21232920|ref|NP_638837.1| cytosine deaminase [Xanthomonas campestris pv. campestris str. ATCC
           33913]
 gi|66767007|ref|YP_241769.1| cytosine deaminase [Xanthomonas campestris pv. campestris str.
           8004]
 gi|21114755|gb|AAM42761.1| cytosine deaminase [Xanthomonas campestris pv. campestris str. ATCC
           33913]
 gi|66572339|gb|AAY47749.1| cytosine deaminase [Xanthomonas campestris pv. campestris str.
           8004]
          Length = 151

 Score =  103 bits (258), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 29/135 (21%), Positives = 50/135 (37%), Gaps = 13/135 (9%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +  A+ EA+       IP+GA     + +++    NR  +  D + H E  A R   R  
Sbjct: 11  LDTAIAEARQGLAEGGIPIGAALYHSDGRLLGCGHNRRVQENDPSVHGETDAFRKAGR-- 68

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
            Q    +  +  TL PC  C+  +    I  +  G S    GGI+   +        H  
Sbjct: 69  -QRRYQDTIMVTTLAPCWYCSGLVRQFNIGTVVVGESVTFQGGIDWLRE--------HGV 119

Query: 127 EIYPGISEQRSRQII 141
            +   +  Q    ++
Sbjct: 120 NVID-LHSQECMDLL 133


>gi|113968486|ref|YP_732279.1| CMP/dCMP deaminase, zinc-binding [Shewanella sp. MR-4]
 gi|113883170|gb|ABI37222.1| CMP/dCMP deaminase, zinc-binding [Shewanella sp. MR-4]
          Length = 157

 Score =  103 bits (257), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 35/89 (39%), Positives = 45/89 (50%), Gaps = 1/89 (1%)

Query: 12  LEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEI 70
           L  AQ       +P  AV V    +I++   NR + L D TAHAEI AIR    +L Q  
Sbjct: 13  LALAQKEVEGTGLPFSAVIVDESGRIVAEGVNRVQALHDCTAHAEIQAIRKATLLLKQVS 72

Query: 71  LPEVDLYVTLEPCTMCAAAISLARIRRLY 99
           L  + L  + EPC  C  AI LA+I R+ 
Sbjct: 73  LEGMTLIASGEPCGFCYMAIQLAKISRVI 101


>gi|295677354|ref|YP_003605878.1| riboflavin biosynthesis protein RibD [Burkholderia sp. CCGE1002]
 gi|295437197|gb|ADG16367.1| riboflavin biosynthesis protein RibD [Burkholderia sp. CCGE1002]
          Length = 383

 Score =  103 bits (257), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 38/151 (25%), Positives = 55/151 (36%), Gaps = 18/151 (11%)

Query: 2   KKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
           +   V M  AL  A+      +  P VG V V N ++I     +         HAEI A+
Sbjct: 4   QTDFVHMERALALAKRGMYTTDPNPRVGCVLVRNGEVIGEGYTQPAGQD----HAEIRAL 59

Query: 60  RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113
           +          L     YVTLEPC        CA A+  A+I R+     +P       G
Sbjct: 60  KDA--RSRGHDLRGATAYVTLEPCSHFGRTPPCANALIEAQIGRVIAAMEDPNPQVSGRG 117

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
                 A      E+  G+    +R++   F
Sbjct: 118 LAMLREAG----IEVRCGLLANEARELNIGF 144


>gi|291562115|emb|CBL40931.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase
           /5-amino-6-(5-phosphoribosylamino)uracil reductase
           [butyrate-producing bacterium SS3/4]
          Length = 369

 Score =  103 bits (257), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 36/151 (23%), Positives = 49/151 (32%), Gaps = 21/151 (13%)

Query: 3   KGNVFMSCALEEAQ--NAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
               +M  A+E A+           VGAV V + +II    +          HAE  AI 
Sbjct: 2   TDRDYMLRAIELAKGGLGWTSPNPLVGAVIVKDGRIIGEGYHERCGEL----HAERNAI- 56

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
                   E      LYVTLEPC        C  AI   +I R+  G+ +P       G 
Sbjct: 57  ----ASLTESAEGATLYVTLEPCCHYGKTPPCTEAILEQKIARVVIGSRDPNPLVAGKGA 112

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
                A       +      +    +   FF
Sbjct: 113 AILRAAG----VRVEEDFMREECDALNPVFF 139


>gi|303328437|ref|ZP_07358874.1| zinc-binding domain protein [Desulfovibrio sp. 3_1_syn3]
 gi|302861431|gb|EFL84368.1| zinc-binding domain protein [Desulfovibrio sp. 3_1_syn3]
          Length = 90

 Score =  103 bits (257), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 29/90 (32%), Positives = 46/90 (51%)

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
           R G   L    L    L VTLEPC MCAAA+  AR+  + YGA++   G + +  ++   
Sbjct: 1   RAGGAALGNYRLAGCVLAVTLEPCAMCAAALVHARLAGVVYGAADDLAGAVISRAEYLDA 60

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             C+H      G+  +    +++DFF+ +R
Sbjct: 61  PFCNHRVWHMGGVRAEACAALLRDFFERKR 90


>gi|229019323|ref|ZP_04176149.1| RibD (Riboflavin-specific deaminase) [Bacillus cereus AH1273]
 gi|228742008|gb|EEL92182.1| RibD (Riboflavin-specific deaminase) [Bacillus cereus AH1273]
          Length = 379

 Score =  103 bits (257), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 37/158 (23%), Positives = 61/158 (38%), Gaps = 24/158 (15%)

Query: 3   KGNVFMSCALEEAQ-NAALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
               +M+ AL+ AQ  +   +  P VGAV V + KI+    +     +    HAE+ A+ 
Sbjct: 11  TDQEYMALALQLAQGTSGQTSPNPMVGAVVVKDGKIVGMGAHMCAGEE----HAEVHALH 66

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           M       E      +YVTLEPC        C   +    ++R+     +       NG 
Sbjct: 67  MAG-----ERAKGATVYVTLEPCSHFGKTPPCCELLIEKGVQRVVIATLDCNPLVSGNGK 121

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF---KERR 149
           +           E+  G+ E  +  + + FF   K +R
Sbjct: 122 RRLEETG----IEVTTGVLEAEATLLNRYFFHYMKTKR 155


>gi|193076093|gb|ABO10696.2| hypothetical protein A1S_0221 [Acinetobacter baumannii ATCC 17978]
          Length = 361

 Score =  103 bits (257), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 41/155 (26%), Positives = 63/155 (40%), Gaps = 21/155 (13%)

Query: 1   MKKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           +K+   +M  A+E A+         P VG V V +N++I    +     K    HAE+ A
Sbjct: 4   LKQDQYWMQQAIELAKRGLYSTKPNPNVGCVIVKDNQLIGEGFH----PKAGQPHAEVFA 59

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
           +R        E       YVTLEPC        CA A+  A+++++     +P       
Sbjct: 60  LREAG-----EHAQGATAYVTLEPCAHYGRTPPCAEALVKAQVKKVVVACPDPNPLVAGK 114

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
           G Q       +   E+  GI E  + Q+ Q F K 
Sbjct: 115 GVQILK----NAGIEVEIGICEDLAAQLNQGFLKA 145


>gi|146338815|ref|YP_001203863.1| putative cytidine and deoxycytidylate deaminase zinc-binding
           protein [Bradyrhizobium sp. ORS278]
 gi|146191621|emb|CAL75626.1| putative cytidine and deoxycytidylate deaminase zinc-binding
           protein [Bradyrhizobium sp. ORS278]
          Length = 139

 Score =  103 bits (257), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 34/132 (25%), Positives = 52/132 (39%), Gaps = 14/132 (10%)

Query: 21  RNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVT 79
               P  A+ V  + +++  A N     +D TAHAE L     CR ++ +I     LY +
Sbjct: 3   HGNHPFAAILVDGDGRVLIEAENGYMPDRDATAHAERLVATQACRSIAPDIRATATLYSS 62

Query: 80  LEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH-----------HSPEI 128
            EPC MCA AI  A I R+ YG S  +    +         T              + E+
Sbjct: 63  AEPCAMCAGAIYWAGIGRVVYGLSERRL--RDFTGNHPENPTLDLPCRDVFASGQRTTEV 120

Query: 129 YPGISEQRSRQI 140
              + E  +  +
Sbjct: 121 LGPLLEDEAAAL 132


>gi|83648598|ref|YP_437033.1| riboflavin biosynthesis protein RibD [Hahella chejuensis KCTC 2396]
 gi|83636641|gb|ABC32608.1| riboflavin biosynthesis protein RibD [Hahella chejuensis KCTC 2396]
          Length = 362

 Score =  103 bits (257), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 38/148 (25%), Positives = 52/148 (35%), Gaps = 21/148 (14%)

Query: 8   MSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M+ AL  A+      +  P VG V V    I+    +          HAE+ A+R     
Sbjct: 1   MARALRLAERGLYTTDPNPRVGCVLVKEGVIVGEGWHERAGEG----HAEVNALRAAG-- 54

Query: 66  LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
              E     D YVTLEPC        CA A+  A +RR+     +P       G      
Sbjct: 55  ---ESARGADCYVTLEPCSHYGRTPPCAEALVKAGVRRVIAAMEDPNPSVAGKGLALLRG 111

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKE 147
           A      E   G     + ++   FFK 
Sbjct: 112 AG----VESEVGCMAAEAYELNLGFFKR 135


>gi|21241410|ref|NP_640992.1| cytosine deaminase [Xanthomonas axonopodis pv. citri str. 306]
 gi|294625645|ref|ZP_06704268.1| cytosine deaminase [Xanthomonas fuscans subsp. aurantifolii str.
           ICPB 11122]
 gi|294666814|ref|ZP_06732047.1| cytosine deaminase [Xanthomonas fuscans subsp. aurantifolii str.
           ICPB 10535]
 gi|21106745|gb|AAM35528.1| cytosine deaminase [Xanthomonas axonopodis pv. citri str. 306]
 gi|292600068|gb|EFF44182.1| cytosine deaminase [Xanthomonas fuscans subsp. aurantifolii str.
           ICPB 11122]
 gi|292603398|gb|EFF46816.1| cytosine deaminase [Xanthomonas fuscans subsp. aurantifolii str.
           ICPB 10535]
          Length = 151

 Score =  103 bits (257), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 29/135 (21%), Positives = 49/135 (36%), Gaps = 13/135 (9%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +  A+ EA+       IP+GA     + +++    NR  +  D + H E  A R   R  
Sbjct: 11  LDTAIAEARQGLAEGGIPIGAALYHNDGRLLGCGHNRRVQENDPSVHGETDAFRKAGR-- 68

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
            Q    +  +  TL PC  C+  +    I  +  G S    GGI    +        H  
Sbjct: 69  -QRRYKDTIMVTTLAPCWYCSGLVRQFNIGTVVVGESVTFQGGIAWLRE--------HGV 119

Query: 127 EIYPGISEQRSRQII 141
            +   +  Q    ++
Sbjct: 120 NVID-LQSQECIDLL 133


>gi|297157114|gb|ADI06826.1| cytidine/deoxycytidine deaminase [Streptomyces bingchenggensis
           BCW-1]
          Length = 143

 Score =  103 bits (257), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 27/101 (26%), Positives = 43/101 (42%), Gaps = 1/101 (0%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
               +  A+  A  A    + P G++    +  I++ A N  R   D+TAH E+   R  
Sbjct: 6   DETLLRRAIGIAARAVTLGDAPYGSLLAGPDGTILAEAHNTVRRDNDITAHPELKLARWA 65

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
            R L  +      LY + +PC MC   I  + + R+ Y  S
Sbjct: 66  ARELDPDTAARTTLYTSCQPCGMCGGGIVRSGVGRVVYALS 106


>gi|328876450|gb|EGG24813.1| CMP/dCMP deaminase [Dictyostelium fasciculatum]
          Length = 251

 Score =  103 bits (257), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 36/151 (23%), Positives = 60/151 (39%), Gaps = 15/151 (9%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIIS-RAGNRNRELKDVTAHAEILAIRM 61
           K   +M  AL+  +    R     GAV V  N  ++    N+     +   H EI+AI  
Sbjct: 60  KHENWMKLALQITKAVNGR----FGAVIVNENGTLACTGVNQ--GKINRINHGEIVAINN 113

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF-YTLA 120
              + ++ +     LY T EPC MC AAI   + + + +G+            Q   + A
Sbjct: 114 CSNLYTKNMFEGWTLYTTGEPCPMCQAAIMWTKFKTVVFGSYVSNMYCERCLNQLPISSA 173

Query: 121 TCH-------HSPEIYPGISEQRSRQIIQDF 144
             +       H  EI  G+ E+ + ++   F
Sbjct: 174 AINSLGYGIGHYTEIIGGVLEKETDKLFPTF 204


>gi|325577912|ref|ZP_08148145.1| riboflavin biosynthesis protein RibD [Haemophilus parainfluenzae
           ATCC 33392]
 gi|325160342|gb|EGC72469.1| riboflavin biosynthesis protein RibD [Haemophilus parainfluenzae
           ATCC 33392]
          Length = 376

 Score =  103 bits (257), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 34/155 (21%), Positives = 54/155 (34%), Gaps = 21/155 (13%)

Query: 3   KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
               FM  ALE A          P VG V V N +I+ +  +   +      HAE +A+ 
Sbjct: 8   DDVKFMQLALELAAKGQYTTTPNPSVGCVLVKNGEIVGKGFH--FKAGQP--HAERMALA 63

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
                           YVTLEPC        CA  +  A + R+    ++P       G 
Sbjct: 64  DAGEKA-----KGATAYVTLEPCSHYGRTPPCALGLIEAGVSRVVAAMADPNPQVAGKGL 118

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
           +    A    +      +  +++  + + F K  R
Sbjct: 119 KMLADAGIPTAVN----LLNEQAEALNKGFLKRMR 149


>gi|213018626|ref|ZP_03334434.1| riboflavin biosynthesis protein RibD [Wolbachia endosymbiont of
           Culex quinquefasciatus JHB]
 gi|212995577|gb|EEB56217.1| riboflavin biosynthesis protein RibD [Wolbachia endosymbiont of
           Culex quinquefasciatus JHB]
          Length = 399

 Score =  103 bits (257), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 36/148 (24%), Positives = 58/148 (39%), Gaps = 25/148 (16%)

Query: 8   MSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
           MS AL+ A+ +     +   P VG + V N  +I               HAE++A++   
Sbjct: 1   MSIALKLAEKSL--GSVAPNPAVGCIIVKNGMVIGEGY----TGIGGRPHAEVVALQNAK 54

Query: 64  RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFY 117
            +          +YVTLEPC        C A I  + I+R+   A +P       G +  
Sbjct: 55  DLTHS-----ATMYVTLEPCCHFGVTEPCTAEIIKSGIKRVVIAAIDPDSRVSGGGIKAL 109

Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDFF 145
             A      E+  GI ++ +  +   FF
Sbjct: 110 KEAG----IEVEQGIMQKEAEVLNVGFF 133


>gi|225454196|ref|XP_002273879.1| PREDICTED: similar to cytidine/deoxycytidylate deaminase family
           protein [Vitis vinifera]
          Length = 379

 Score =  103 bits (257), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 30/151 (19%), Positives = 58/151 (38%), Gaps = 21/151 (13%)

Query: 2   KKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
           +    +M   +E A+ A    +  P VG V V + K++    +     K    H E+ A+
Sbjct: 26  EDDGFYMRRCVELARKAIGCTSPNPMVGCVIVKDGKVVGEGFH----PKAGQPHGEVFAL 81

Query: 60  RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113
           R    +           YV+LEPC        C  A+  A+++++  G  +P       G
Sbjct: 82  RDAGDLAEN-----ATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVIGMVDPNPIVASKG 136

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
                 A      E+   + E+  +++ + +
Sbjct: 137 VDRLRDAG----IEVTVAVEEELCKKLNEAY 163


>gi|21673577|ref|NP_661642.1| riboflavin biosynthesis protein RibD [Chlorobium tepidum TLS]
 gi|21646689|gb|AAM71984.1| riboflavin biosynthesis protein RibD [Chlorobium tepidum TLS]
          Length = 373

 Score =  103 bits (257), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 41/157 (26%), Positives = 61/157 (38%), Gaps = 23/157 (14%)

Query: 3   KGNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           +   +M   LE A+  A    +   P VG+V V   ++I    +R         HAE+ A
Sbjct: 12  EDETYMWRCLELAERGA--GSVSPNPMVGSVIVCAGRVIGEGWHRQYGG----PHAEVDA 65

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
           I     +  + +L +  LYV LEPC        CA  I   RI R+  G  +P       
Sbjct: 66  I---ASVEDESLLRQSTLYVNLEPCSHYGKTPPCADLIVEKRIPRVVVGCLDPHEKVAGK 122

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
           G      A      E+  G+ E  S ++ + F    R
Sbjct: 123 GIARLREAG----IEVTVGVLEAESERLNEAFMTSHR 155


>gi|293366290|ref|ZP_06612971.1| riboflavin biosynthesis protein RibD [Staphylococcus epidermidis
           M23864:W2(grey)]
 gi|291319592|gb|EFE59957.1| riboflavin biosynthesis protein RibD [Staphylococcus epidermidis
           M23864:W2(grey)]
          Length = 343

 Score =  103 bits (257), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 36/150 (24%), Positives = 60/150 (40%), Gaps = 24/150 (16%)

Query: 8   MSCALEEAQNAALRNEI--PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M  A++ A+    +  +  PVG+V V N +I+    +  +  K    HAE+ AI M    
Sbjct: 1   MDDAIQLAKMVNGQTGVNPPVGSVVVKNGRIVGLGAHLKKGDK----HAEVQAIEMAGLN 56

Query: 66  LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
                     +YV+LEPC        C   I  A I ++ Y   +     +  G +    
Sbjct: 57  TQ-----GATIYVSLEPCTHHGSTPPCVHKIIEAGISKVIYAVKDTTL--VSKGDEILRE 109

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
           A      E+    +E  +  + +DFF  +R
Sbjct: 110 AG----IEVEFQYNEN-AAALYRDFFTAKR 134


>gi|262370188|ref|ZP_06063515.1| pyrimidine deaminase [Acinetobacter johnsonii SH046]
 gi|262315227|gb|EEY96267.1| pyrimidine deaminase [Acinetobacter johnsonii SH046]
          Length = 367

 Score =  103 bits (257), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 34/152 (22%), Positives = 50/152 (32%), Gaps = 21/152 (13%)

Query: 4   GNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
              +M  A+  A          P VG V V +  ++    +          HAE+ A+R 
Sbjct: 12  DQAWMKQAIALALQGQYSTKPNPNVGCVIVKDGLLLGTGYHPQAGQL----HAEVFAMRE 67

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
                          YVTLEPC        CA  +  A + R+     +P       G Q
Sbjct: 68  AGEQTQ-----GATAYVTLEPCAHYGRTPPCAKGLVEAGVARVVIACPDPNPLVAGKGVQ 122

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
               A      E+  GI +  + Q+   F K 
Sbjct: 123 ILKEAG----IEVDVGICQTEAHQLNAGFLKA 150


>gi|291541288|emb|CBL14399.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase
           /5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Roseburia intestinalis XB6B4]
          Length = 396

 Score =  103 bits (257), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 36/153 (23%), Positives = 57/153 (37%), Gaps = 19/153 (12%)

Query: 1   MKKGNVFMSCALEEAQ--NAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           M++   +M  A+E A+      +    VGAV V  ++II    ++         HAE  A
Sbjct: 31  MQQ-ERYMRRAMELAELGRGWTKTNPVVGAVLVKEDRIIGEGYHKKFGGL----HAEREA 85

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
           +         E     DLYVTLEPC        C  A+  A I  ++ GA +        
Sbjct: 86  L--ADCRSRGEDPAGADLYVTLEPCCHYGKTPPCTQAVIEAGISHVFVGAKDINPLVAGG 143

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
           G +            +  G+ ++      + FF
Sbjct: 144 GIRQLREQGIL----VTEGVLQEECEYQNRVFF 172


>gi|91225069|ref|ZP_01260291.1| riboflavin-specific deaminase [Vibrio alginolyticus 12G01]
 gi|91190012|gb|EAS76283.1| riboflavin-specific deaminase [Vibrio alginolyticus 12G01]
          Length = 375

 Score =  103 bits (257), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 38/154 (24%), Positives = 56/154 (36%), Gaps = 21/154 (13%)

Query: 4   GNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
               MS A++ A+         P VG V V + +I+    +          HAE+ A+RM
Sbjct: 14  DFAMMSRAIKLAKRGIYTTAPNPNVGCVIVRDEEIVGEGYHHRAGE----PHAEVHAMRM 69

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
                          YVTLEPC        CA  +  A++ R+     +P       G Q
Sbjct: 70  AGEKA-----VGATAYVTLEPCSHYGRTPPCAEGLIKAKVARVVCAMVDPNPKVAGRGIQ 124

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
               A      E+  G+ EQ +  +   F K  R
Sbjct: 125 MLRDAG----IEVQIGLLEQDALALNPGFIKYMR 154


>gi|300727427|ref|ZP_07060836.1| riboflavin biosynthesis protein RibD [Prevotella bryantii B14]
 gi|299775307|gb|EFI71906.1| riboflavin biosynthesis protein RibD [Prevotella bryantii B14]
          Length = 320

 Score =  103 bits (257), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 36/158 (22%), Positives = 58/158 (36%), Gaps = 23/158 (14%)

Query: 1   MKK---GNVFMSCALEEAQNAA--LRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHA 54
           M +      +M   +  A+N     +    VGAV V  +N+II      +        HA
Sbjct: 1   MNQKSIDEKYMRRCIAIARNGLNSAKPNPSVGAVIVSADNRIIGEGYTSSYGG----PHA 56

Query: 55  EILAIRMGCRILSQEIL-PEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKG 107
           E+ A          E L  +  LYV+LEPC        CA  +    ++R   G  +P  
Sbjct: 57  EVNAF--ASVKPEDEHLLADATLYVSLEPCSHYGKTPPCADLVVRKGVKRCVCGCIDPFS 114

Query: 108 GGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
                G +    A      ++  G+ E+  +   + FF
Sbjct: 115 EVQGRGIKKLRDAG----IDVTVGVLEKECKASNKRFF 148


>gi|222099734|ref|YP_002534302.1| Riboflavin biosynthesis protein RibD [Thermotoga neapolitana DSM
           4359]
 gi|221572124|gb|ACM22936.1| Riboflavin biosynthesis protein RibD [Thermotoga neapolitana DSM
           4359]
          Length = 348

 Score =  103 bits (257), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 35/110 (31%), Positives = 45/110 (40%), Gaps = 14/110 (12%)

Query: 5   NVFMSCALEEAQNAALR--NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
             FM  A+E A+    R     PVGAV V   +IIS   +          HAE +AI   
Sbjct: 3   ERFMKRAIELAKKGLGRVNPNPPVGAVVVKEGRIISEGFHPYFGG----PHAERVAIESA 58

Query: 63  CRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPK 106
            R    E L    L VTLEPC        C   I  + I+++  G  +P 
Sbjct: 59  KRK--GEDLTGTTLVVTLEPCDHHGKTPPCTDLIIESGIKKVVIGMRDPN 106


>gi|58583479|ref|YP_202495.1| riboflavin-specific deaminase; 5-amino-6-uracil reductase
           [Xanthomonas oryzae pv. oryzae KACC10331]
 gi|84625292|ref|YP_452664.1| riboflavin-specific deaminase [Xanthomonas oryzae pv. oryzae MAFF
           311018]
 gi|188575264|ref|YP_001912193.1| riboflavin biosynthesis protein RibD [Xanthomonas oryzae pv. oryzae
           PXO99A]
 gi|58428073|gb|AAW77110.1| riboflavin-specific deaminase; 5-amino-6-uracil reductase
           [Xanthomonas oryzae pv. oryzae KACC10331]
 gi|84369232|dbj|BAE70390.1| riboflavin-specific deaminase [Xanthomonas oryzae pv. oryzae MAFF
           311018]
 gi|188519716|gb|ACD57661.1| riboflavin biosynthesis protein RibD [Xanthomonas oryzae pv. oryzae
           PXO99A]
          Length = 369

 Score =  103 bits (257), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 35/150 (23%), Positives = 56/150 (37%), Gaps = 21/150 (14%)

Query: 3   KGNVFMSCALEEAQN-AALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
             + +M+ AL  A+  A      P VG V V +   +    ++         HAE+ A+R
Sbjct: 11  DDHRWMAQALRLAERGAYTTRPNPMVGCVIVRDGVCVGEGFHQRAGG----PHAEVFALR 66

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
               +           YVTLEPC        CA A+  A + R+    ++P       G 
Sbjct: 67  AAGELA-----RGATAYVTLEPCAHYGRTPPCALALIEAGVTRVVAAMADPFPQVNGGGF 121

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
                A      E+  G+   ++R + Q F
Sbjct: 122 ALLRDAG----IEVLSGVMHAQARTLNQGF 147


>gi|332662070|ref|YP_004444858.1| riboflavin biosynthesis protein RibD [Haliscomenobacter hydrossis
           DSM 1100]
 gi|332330884|gb|AEE47985.1| riboflavin biosynthesis protein RibD [Haliscomenobacter hydrossis
           DSM 1100]
          Length = 351

 Score =  103 bits (257), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 41/152 (26%), Positives = 62/152 (40%), Gaps = 24/152 (15%)

Query: 1   MKKG-NVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAE 55
           M K  N +++   + A+  A    +   P VGAV V +NKII    ++        AHAE
Sbjct: 1   MVKDINRYITRCFDLARMGA--GSVSPNPMVGAVLVYDNKIIGEGYHQKYGG----AHAE 54

Query: 56  ILAIRMGCRILSQEIL-PEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGG 108
           + A+      LS   L PE  LYV+LEPC        C   I   +I R+     +    
Sbjct: 55  VNAL--ASVSLSNRPLIPESTLYVSLEPCCIFGKTPPCTNLIIQEKIPRVVISCLDLTPE 112

Query: 109 GIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140
               G +        H  E+  G+ E+  + +
Sbjct: 113 VKGRGVELLRA----HGIEVTTGVLEKEGQAL 140


>gi|312880086|ref|ZP_07739886.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase
           ;5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Aminomonas paucivorans DSM 12260]
 gi|310783377|gb|EFQ23775.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase
           ;5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Aminomonas paucivorans DSM 12260]
          Length = 378

 Score =  102 bits (256), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 35/154 (22%), Positives = 54/154 (35%), Gaps = 21/154 (13%)

Query: 2   KKGNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
           ++   FM  AL  A      +     VG V V   K++    +R         HAE+ A+
Sbjct: 16  REHQYFMHMALSLALRGTGFVSPNPRVGCVVVREGKVVGWGYHRRYGG----PHAEVEAL 71

Query: 60  RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113
           R    +          +YV LEPC        CA  +  AR+ R   G  +P       G
Sbjct: 72  RRAGTLA-----EGSTVYVNLEPCSHQGKTPPCAPQLVEARVARAVVGMRDPNPRVDGRG 126

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
                 A      E+   +  + +R I + F + 
Sbjct: 127 IDLLRDAG----IEVLESVLPEEARWINRGFIRR 156


>gi|289664006|ref|ZP_06485587.1| cytosine deaminase [Xanthomonas campestris pv. vasculorum NCPPB702]
 gi|289667443|ref|ZP_06488518.1| cytosine deaminase [Xanthomonas campestris pv. musacearum
           NCPPB4381]
          Length = 151

 Score =  102 bits (256), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 29/135 (21%), Positives = 49/135 (36%), Gaps = 13/135 (9%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +  A+ EA+       IP+GA     + +++    NR  +  D + H E  A R   R  
Sbjct: 11  LDTAITEARQGLAEGGIPIGAALYHNDGRLLGCGHNRRVQENDPSVHGETDAFRKAGR-- 68

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
            Q    +  +  TL PC  C+  +    I  +  G S    GGI    +        H  
Sbjct: 69  -QRRYKDTIMVTTLAPCWYCSGLVRQFNIGTVVVGESVTFQGGIAWLRE--------HGV 119

Query: 127 EIYPGISEQRSRQII 141
            +   +  Q    ++
Sbjct: 120 NVID-LQSQECIDLL 133


>gi|325925419|ref|ZP_08186818.1| cytosine/adenosine deaminase [Xanthomonas perforans 91-118]
 gi|325928766|ref|ZP_08189935.1| cytosine/adenosine deaminase [Xanthomonas perforans 91-118]
 gi|325540847|gb|EGD12420.1| cytosine/adenosine deaminase [Xanthomonas perforans 91-118]
 gi|325544179|gb|EGD15563.1| cytosine/adenosine deaminase [Xanthomonas perforans 91-118]
          Length = 151

 Score =  102 bits (256), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 29/135 (21%), Positives = 49/135 (36%), Gaps = 13/135 (9%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +  A+ EA+       IP+GA     + +++    NR  +  D + H E  A R   R  
Sbjct: 11  LDTAITEARQGLAEGGIPIGAALYHNDGRLLGCGHNRRVQENDPSVHGETDAFRKAGR-- 68

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
            Q    +  +  TL PC  C+  +    I  +  G S    GGI    +        H  
Sbjct: 69  -QRRYKDTIMVTTLAPCWYCSGLVRQFNIGTVVVGESVTFQGGIAWLRE--------HGV 119

Query: 127 EIYPGISEQRSRQII 141
            +   +  Q    ++
Sbjct: 120 NVID-LQSQECIDLL 133


>gi|311694330|gb|ADP97203.1| CMP/dCMP deaminase, zinc-binding protein [marine bacterium HP15]
          Length = 159

 Score =  102 bits (256), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 33/107 (30%), Positives = 48/107 (44%), Gaps = 3/107 (2%)

Query: 11  ALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQE 69
           A++ A +      +P  AV V  N  ++ +  N+  E  D TAHAEI AIR   R  +  
Sbjct: 17  AIDLAISNVKAGGLPFSAVIVNQNGDVVGKGVNQVAEHLDCTAHAEIQAIRDASRNENSV 76

Query: 70  ILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116
            L    L  + EPC +C  AI +A I  +       +    ENG  +
Sbjct: 77  SLKGTTLIASGEPCALCYMAIRMAGIGHVRILL--DRYEAAENGFDY 121


>gi|297584480|ref|YP_003700260.1| riboflavin biosynthesis protein RibD [Bacillus selenitireducens
           MLS10]
 gi|297142937|gb|ADH99694.1| riboflavin biosynthesis protein RibD [Bacillus selenitireducens
           MLS10]
          Length = 361

 Score =  102 bits (256), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 38/151 (25%), Positives = 60/151 (39%), Gaps = 21/151 (13%)

Query: 3   KGNVFMSCALE--EAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
             + +M  A+E  EA          VG V V +N+I     +          HAE  A+ 
Sbjct: 2   NDDHYMKLAIEIAEATKGQTSPNPQVGCVIVKHNQIKGIGAHLKAGE----WHAERQALH 57

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           M      +E       YVTLEPC        C+ A+  A I R+   +S+P       G 
Sbjct: 58  MA-----KEEANGATAYVTLEPCSHHGKTPPCSDALIEAGISRVVTASSDPNPDVSGRGI 112

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
           +    A      E+  G+ ++R+ ++ + FF
Sbjct: 113 RRLRDAG----IEVVEGVQKERADRMNRWFF 139


>gi|320333701|ref|YP_004170412.1| CMP/dCMP deaminase zinc-binding protein [Deinococcus maricopensis
           DSM 21211]
 gi|319754990|gb|ADV66747.1| CMP/dCMP deaminase zinc-binding protein [Deinococcus maricopensis
           DSM 21211]
          Length = 184

 Score =  102 bits (256), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 35/128 (27%), Positives = 53/128 (41%), Gaps = 12/128 (9%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDV-------TAHA 54
               ++   L  A+ A  +   PVGAV V     II+R  NR  E +          AHA
Sbjct: 2   DHRPYLQETLRLAREAQTQGSAPVGAVLVNEHGDIIARGRNRVGEAQTPQHVGDASVAHA 61

Query: 55  EILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           E+       ++   + L    LY +LEPC MC  A +L  +RR+ +   +P  GG     
Sbjct: 62  EMDLYFQIGKLKDPQHL---TLYTSLEPCLMCGGASALLGVRRIVWATDDPW-GGSGRLI 117

Query: 115 QFYTLATC 122
           ++      
Sbjct: 118 KWADHPAM 125


>gi|229117606|ref|ZP_04246978.1| RibD (Riboflavin-specific deaminase) [Bacillus cereus Rock1-3]
 gi|228665926|gb|EEL21396.1| RibD (Riboflavin-specific deaminase) [Bacillus cereus Rock1-3]
          Length = 379

 Score =  102 bits (256), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 35/158 (22%), Positives = 59/158 (37%), Gaps = 24/158 (15%)

Query: 3   KGNVFMSCALEEAQ-NAALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
               +M  AL+ A+  +   +  P VGAV V +  I+    +     +    HAE+ A+ 
Sbjct: 11  TDQEYMRIALQLAKGTSGQTSPNPMVGAVVVKDGNIVGMGAHLCAGEE----HAEVHALH 66

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           M              +YVTLEPC        C   +    ++R+     +       NG 
Sbjct: 67  MAGEKAKN-----ATVYVTLEPCSHFGKTPPCCELLIEKGVKRIVIATLDCNPLVSGNGK 121

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF---KERR 149
           +    A      E+  G+ E  +  + + FF   K +R
Sbjct: 122 KKLEEAG----IEVTTGVLETEAVLLNRYFFHYMKTKR 155


>gi|332676151|gb|AEE72967.1| riboflavin biosynthesis protein RibD [Propionibacterium acnes 266]
          Length = 323

 Score =  102 bits (256), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 35/144 (24%), Positives = 58/144 (40%), Gaps = 21/144 (14%)

Query: 8   MSCALEEAQNAALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M+ AL+ A  +   +  P VG V V  +++I +  +R       T HAE+ A+R      
Sbjct: 1   MALALDMAAKSPCPDPNPRVGCVIVAEDRVIGQGWHR----GAGTPHAEVEALRQAG--- 53

Query: 67  SQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
             + +      VTLEPC        C+ A+  A I R+    S+P            T  
Sbjct: 54  --DDVRGATAVVTLEPCHHTGRTGPCSHALVDAGIARVVIAQSDPNPVASGGEQWLRT-- 109

Query: 121 TCHHSPEIYPGISEQRSRQIIQDF 144
              H  E+  G+  + +  +  D+
Sbjct: 110 ---HGVEVVTGVLSEEATALNADW 130


>gi|262280656|ref|ZP_06058439.1| pyrimidine deaminase [Acinetobacter calcoaceticus RUH2202]
 gi|262257556|gb|EEY76291.1| pyrimidine deaminase [Acinetobacter calcoaceticus RUH2202]
          Length = 361

 Score =  102 bits (256), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 39/155 (25%), Positives = 62/155 (40%), Gaps = 21/155 (13%)

Query: 1   MKKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           +KK   +M  A+E A+         P VG V V ++++I    +     K    HAE+ A
Sbjct: 4   LKKDQYWMQQAIELAKRGLYSTKPNPNVGCVIVKDDQLIGEGFH----PKAGQPHAEVFA 59

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
           +R                YVTLEPC        CA A+  A+++++     +P       
Sbjct: 60  LRQAAEQAQ-----GATAYVTLEPCAHYGRTPPCAEALVKAQVKKVVVACPDPNPLVAGK 114

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
           G Q       +   E+  GI E  + ++ Q F K 
Sbjct: 115 GVQILK----NAGIEVEVGICEDLAEKLNQGFLKA 145


>gi|317484774|ref|ZP_07943673.1| riboflavin biosynthesis protein RibD [Bilophila wadsworthia 3_1_6]
 gi|316923981|gb|EFV45168.1| riboflavin biosynthesis protein RibD [Bilophila wadsworthia 3_1_6]
          Length = 379

 Score =  102 bits (256), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 35/148 (23%), Positives = 53/148 (35%), Gaps = 19/148 (12%)

Query: 5   NVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
             FM  A E A+         P VGAV V +   ++R  +         +HAE+  ++  
Sbjct: 6   ESFMREAAELAERGRWSAAPNPTVGAVLVRDGVAVARGWHTAYGK----SHAEVECLKDA 61

Query: 63  CRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116
                        L VTLEPC        C  A+  A IR +  G  +P         + 
Sbjct: 62  EAKGVDP--SACTLVVTLEPCNHQGQTPPCTEAVIAAGIRHVVIGLRDPNPKAAGGMERL 119

Query: 117 YTLATCHHSPEIYPGISEQRSRQIIQDF 144
                     E+  G+ E+  R ++ DF
Sbjct: 120 AEA-----GVEVEAGVCEELCRDLVADF 142


>gi|184156566|ref|YP_001844905.1| pyrimidine deaminase [Acinetobacter baumannii ACICU]
 gi|332874950|ref|ZP_08442801.1| riboflavin biosynthesis protein RibD [Acinetobacter baumannii
           6014059]
 gi|183208160|gb|ACC55558.1| Pyrimidine deaminase [Acinetobacter baumannii ACICU]
 gi|322506453|gb|ADX01907.1| ribD [Acinetobacter baumannii 1656-2]
 gi|323516332|gb|ADX90713.1| pyrimidine deaminase [Acinetobacter baumannii TCDC-AB0715]
 gi|332736893|gb|EGJ67869.1| riboflavin biosynthesis protein RibD [Acinetobacter baumannii
           6014059]
          Length = 361

 Score =  102 bits (256), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 39/155 (25%), Positives = 62/155 (40%), Gaps = 21/155 (13%)

Query: 1   MKKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           +K+   +M  A+E A+         P VG V V ++++I    +     K    HAE+ A
Sbjct: 4   LKQDQYWMQQAIELAKRGLYSTKPNPNVGCVIVKDDQLIGEGFH----PKAGQPHAEVFA 59

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
           +R                YVTLEPC        CA A+  A+++++     +P       
Sbjct: 60  LRQAGEQAQ-----GATAYVTLEPCAHYGRTPPCAEALVKAQVKKVVVACPDPNPLVAGK 114

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
           G Q       +   E+  GI E  + Q+ Q F K 
Sbjct: 115 GVQILK----NAGIEVEIGICEDLAAQLNQGFLKA 145


>gi|21618159|gb|AAM67209.1| probable riboflavin biosynthesis related protein [Arabidopsis
           thaliana]
          Length = 426

 Score =  102 bits (256), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 33/150 (22%), Positives = 60/150 (40%), Gaps = 21/150 (14%)

Query: 3   KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
             + +M   +E A+ A    +  P VG V V +  I+ +  +     K    HAE+ A+R
Sbjct: 73  DDSFYMRKCVELAKRAIGCTSPNPMVGCVIVKDGDIVGQGFH----PKAGQPHAEVFALR 128

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
               +           YV+LEPC        C  A+  A++RR+  G  +P      +G 
Sbjct: 129 DAGELAEN-----ATAYVSLEPCNHYGRTPPCTEALIKAKVRRVVIGMVDPNPIVFSSGI 183

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
                A      ++   + E+  +++ + F
Sbjct: 184 SRLKDAG----IDVTVSVEEELCKKMNEGF 209


>gi|27904888|ref|NP_778014.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Buchnera
           aphidicola str. Bp (Baizongia pistaciae)]
 gi|46396884|sp|Q89AB0|RIBD_BUCBP RecName: Full=Riboflavin biosynthesis protein RibD; Includes:
           RecName:
           Full=Diaminohydroxyphosphoribosylaminopyrimidine
           deaminase; Short=DRAP deaminase; AltName:
           Full=Riboflavin-specific deaminase; Includes: RecName:
           Full=5-amino-6-(5-phosphoribosylamino)uracil reductase;
           AltName: Full=HTP reductase
 gi|27904286|gb|AAO27119.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Buchnera
           aphidicola str. Bp (Baizongia pistaciae)]
          Length = 372

 Score =  102 bits (256), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 39/153 (25%), Positives = 62/153 (40%), Gaps = 21/153 (13%)

Query: 3   KGNVFMSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           K   +M  A++ A+  +L     P VG + V NN I+    ++   +K    HAEI A+ 
Sbjct: 2   KDIFYMKKAIKLAKKGSLTTSPNPNVGCIIVNNNIIVGSGWHKKTGMK----HAEIYAL- 56

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
                 S E       Y+TLEPC        C  A++   I R+     +P      NG 
Sbjct: 57  ----KTSGEKAKGATAYITLEPCSHFGKTPPCCVALTKYGISRVVIATLDPNPKVSGNGV 112

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
           ++       H   +  G   + S +I + FF+ 
Sbjct: 113 KWLKK----HGILVTIGTLSKESIKINKGFFQR 141


>gi|18415600|ref|NP_567618.1| cytidine/deoxycytidylate deaminase family protein [Arabidopsis
           thaliana]
 gi|26452452|dbj|BAC43311.1| unknown protein [Arabidopsis thaliana]
 gi|29824151|gb|AAP04036.1| unknown protein [Arabidopsis thaliana]
 gi|332658979|gb|AEE84379.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Arabidopsis thaliana]
          Length = 426

 Score =  102 bits (256), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 33/150 (22%), Positives = 60/150 (40%), Gaps = 21/150 (14%)

Query: 3   KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
             + +M   +E A+ A    +  P VG V V +  I+ +  +     K    HAE+ A+R
Sbjct: 73  DDSFYMRKCVELAKRAIGCTSPNPMVGCVIVKDGDIVGQGFH----PKAGQPHAEVFALR 128

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
               +           YV+LEPC        C  A+  A++RR+  G  +P      +G 
Sbjct: 129 DAGELAEN-----ATAYVSLEPCNHYGRTPPCTEALIKAKVRRVVIGMVDPNPIVFSSGI 183

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
                A      ++   + E+  +++ + F
Sbjct: 184 SRLKDAG----IDVTVSVEEELCKKMNEGF 209


>gi|20091176|ref|NP_617251.1| cytosine deaminase [Methanosarcina acetivorans C2A]
 gi|19916284|gb|AAM05731.1| cytosine deaminase [Methanosarcina acetivorans C2A]
          Length = 189

 Score =  102 bits (256), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 31/135 (22%), Positives = 48/135 (35%), Gaps = 16/135 (11%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNN--KIISRAGNRNRELKDVTAHAEILAIR 60
               FM  A+  AQ +      P+G V + NN  +I+ +  N   +  D   H E  AIR
Sbjct: 40  SDRNFMRIAVLLAQKSYDEGGCPIGGVIIDNNTRRIVGKGHNTLVQDNDPYNHGETSAIR 99

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              R           ++ TL PC +CA  I + +  R+           + + T      
Sbjct: 100 DAGRQ----DFSNTTIFTTLSPCDVCATLIYMRQFDRVV----------VGDVTNASGNE 145

Query: 121 TCHHSPEIYPGISEQ 135
              H   +   I E 
Sbjct: 146 QMLHEKGVKVDILED 160


>gi|52141386|ref|YP_085445.1| riboflavin biosynthesis protein [Bacillus cereus E33L]
 gi|51974855|gb|AAU16405.1| riboflavin biosynthesis protein [Bacillus cereus E33L]
          Length = 370

 Score =  102 bits (256), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 34/158 (21%), Positives = 55/158 (34%), Gaps = 24/158 (15%)

Query: 3   KGNVFMSCALEEAQN--AALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
               +M  AL+ A+           VGA+ V +  I+    +     +    HAE+ A+ 
Sbjct: 2   TDQEYMRIALQLAEGTCGQTSPNPMVGAIVVKDGNIVGMGAHLRAGEE----HAEVHALH 57

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           M              +YVTLEPC        C   +    I R+     +       NG 
Sbjct: 58  MAGDKA-----KGATVYVTLEPCSHFGKTPPCCDLLIKKGITRVVIATLDCNPLVSGNGK 112

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF---KERR 149
           +    A      E+  G+ E  +  + + FF   K +R
Sbjct: 113 RKLEEAG----IEVTTGVLEAEAVLLNRYFFHYMKTKR 146


>gi|284047735|ref|YP_003398074.1| riboflavin biosynthesis protein RibD [Acidaminococcus fermentans
           DSM 20731]
 gi|283951956|gb|ADB46759.1| riboflavin biosynthesis protein RibD [Acidaminococcus fermentans
           DSM 20731]
          Length = 371

 Score =  102 bits (256), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 34/151 (22%), Positives = 56/151 (37%), Gaps = 22/151 (14%)

Query: 3   KGNVFMSCALEEAQNAALRNEI-P-VGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAI 59
               +M  AL+ A+ A       P VG V V    +I+ +  +          HAEI+A+
Sbjct: 8   TDEEYMQMALDLAEKARGCTSPNPLVGCVIVNPEGQIVGKGYHHKAGQ----PHAEIMAM 63

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENG 113
                 +          YVTLEPC+       C  A+  A I+++   A +P       G
Sbjct: 64  ADAGNQV-----EGCTAYVTLEPCSHYGRTGPCCEALIRAGIKKVVAAADDPNPKVAGRG 118

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
                 A      E+  G+   ++ +  + F
Sbjct: 119 FARLQEAG----VEVVRGVLADKANRQNEVF 145


>gi|242243028|ref|ZP_04797473.1| possible diaminohydroxyphosphoribosylaminopyrimidine deaminase
           [Staphylococcus epidermidis W23144]
 gi|242233486|gb|EES35798.1| possible diaminohydroxyphosphoribosylaminopyrimidine deaminase
           [Staphylococcus epidermidis W23144]
          Length = 343

 Score =  102 bits (256), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 36/150 (24%), Positives = 60/150 (40%), Gaps = 24/150 (16%)

Query: 8   MSCALEEAQNAALRNEI--PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M  A++ A+    +  +  PVG+V V N +I+    +  +  K    HAE+ AI M    
Sbjct: 1   MDDAIQLAKMVNGQTGVNPPVGSVVVKNGRIVGLGAHLKKGDK----HAEVQAIEMAGLK 56

Query: 66  LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
                     +YV+LEPC        C   I  A I ++ Y   +     +  G +    
Sbjct: 57  AQ-----GATIYVSLEPCTHHGSTPPCVDKIIEAGISKVIYAVKDTTL--VSKGDEILRE 109

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
           A      E+    +E  +  + +DFF  +R
Sbjct: 110 AG----IEVEFQYNEN-AATLYRDFFTAKR 134


>gi|229163049|ref|ZP_04291005.1| RibD (Riboflavin-specific deaminase) [Bacillus cereus R309803]
 gi|228620455|gb|EEK77325.1| RibD (Riboflavin-specific deaminase) [Bacillus cereus R309803]
          Length = 379

 Score =  102 bits (256), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 36/158 (22%), Positives = 59/158 (37%), Gaps = 24/158 (15%)

Query: 3   KGNVFMSCALEEAQ-NAALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
               +M  AL+ A+  +   +  P VGAV V +  I+    +     +    HAE+ A+ 
Sbjct: 11  TDQEYMRIALQLAEGTSGQTSPNPMVGAVVVKDGNIVGMGAHLRAGEE----HAEVHALH 66

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           M              +YVTLEPC        C   +    ++R+     +       NG 
Sbjct: 67  MAGEKA-----KGATVYVTLEPCSHFGKTPPCCELLIKKGVQRVVIATLDCNPLVSGNGK 121

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF---KERR 149
           +    A      E+  GI E  +  + + FF   K +R
Sbjct: 122 RRLEEAG----IEVTTGILEAEATLLNRFFFHYMKTKR 155


>gi|332295153|ref|YP_004437076.1| CMP/dCMP deaminase zinc-binding protein [Thermodesulfobium
           narugense DSM 14796]
 gi|332178256|gb|AEE13945.1| CMP/dCMP deaminase zinc-binding protein [Thermodesulfobium
           narugense DSM 14796]
          Length = 154

 Score =  102 bits (256), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 36/132 (27%), Positives = 61/132 (46%), Gaps = 10/132 (7%)

Query: 18  AALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLY 77
           +    E+P+GA+      I+S + N          HAEILAI+   +  ++  +    +Y
Sbjct: 16  SFNAGELPIGAIICKEGNILSMSQNFCERSNSPIEHAEILAIKKAIQRYNRWYIQGSTIY 75

Query: 78  VTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRS 137
            +LEPC MCA AI   +I+ + +  S+       +  Q           E++    ++R 
Sbjct: 76  CSLEPCLMCAGAIIECKIKNVIFCVSSKN-----STRQILESNDIF-CIEMF----DERF 125

Query: 138 RQIIQDFFKERR 149
           R +I+ FFKE R
Sbjct: 126 RNLIERFFKEIR 137


>gi|83311440|ref|YP_421704.1| riboflavin biosynthesis protein ribD [Magnetospirillum magneticum
           AMB-1]
 gi|82946281|dbj|BAE51145.1| Riboflavin biosynthesis protein ribD [Magnetospirillum magneticum
           AMB-1]
          Length = 375

 Score =  102 bits (256), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 33/148 (22%), Positives = 52/148 (35%), Gaps = 25/148 (16%)

Query: 8   MSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
           M  AL  A+       +   P VG V V + +++ R   +         HAE  A+ M  
Sbjct: 18  MRAALALARRGL--GTVWPNPAVGCVIVKDGRVVGRGWTQPGGR----PHAETEALAMAG 71

Query: 64  RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFY 117
                       +YVTLEPC        CA A+  A + R+     +P       G    
Sbjct: 72  SAA-----LGATVYVTLEPCAHHGKTAPCADALVAAGVSRVVVAVQDPDSRVAGKGVDRL 126

Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDFF 145
            +A       +  G+    + ++   FF
Sbjct: 127 RVAGIP----VTEGVLHAEAAELNAGFF 150


>gi|323343508|ref|ZP_08083735.1| riboflavin biosynthesis protein RibD [Prevotella oralis ATCC 33269]
 gi|323095327|gb|EFZ37901.1| riboflavin biosynthesis protein RibD [Prevotella oralis ATCC 33269]
          Length = 321

 Score =  102 bits (256), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 34/152 (22%), Positives = 54/152 (35%), Gaps = 19/152 (12%)

Query: 2   KKGNVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
           ++   +M   ++ A N          VGA+     +II    +          HAE+   
Sbjct: 15  EEDIRYMRRCIQLALNGMQNAKPNPMVGALLACEGRIIGEGYHIRFGEG----HAEVNCF 70

Query: 60  RMGCRILSQEIL-PEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
                  + E L P+  LYV+LEPC        CA  I    +RR+  G  +P       
Sbjct: 71  --ASVKPADEHLLPQSTLYVSLEPCSHYGKTPPCADLIIRNGVRRVVVGCIDPFAQVHGR 128

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
           G      A      E+  G+ E+    + + F
Sbjct: 129 GIHKLREAG----IEVVVGVLERECLALNKRF 156


>gi|189346359|ref|YP_001942888.1| riboflavin biosynthesis protein RibD [Chlorobium limicola DSM 245]
 gi|189340506|gb|ACD89909.1| riboflavin biosynthesis protein RibD [Chlorobium limicola DSM 245]
          Length = 372

 Score =  102 bits (256), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 36/155 (23%), Positives = 53/155 (34%), Gaps = 19/155 (12%)

Query: 3   KGNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
               +M    E A     A+     VG V V   ++I    +R         HAE+ A+ 
Sbjct: 11  THEHYMQRCHELALMGSGAVSPNPMVGCVIVSGGQVIGEGFHRQYGG----PHAEVNAV- 65

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
               +  +E L    LYV LEPC        C+  I    I R+  G  +P       G 
Sbjct: 66  --ASVADRERLRNATLYVNLEPCSHFGKTPPCSDMIVEMGIPRVVIGCRDPHLKVAGKGI 123

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
                       E+  G+ E  S ++ + F    R
Sbjct: 124 AKLLAGG----VEVIEGVLETESERLNEAFITVHR 154


>gi|289671055|ref|ZP_06492130.1| riboflavin biosynthesis protein RibD [Xanthomonas campestris pv.
           musacearum NCPPB4381]
          Length = 369

 Score =  102 bits (256), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 34/150 (22%), Positives = 56/150 (37%), Gaps = 21/150 (14%)

Query: 3   KGNVFMSCALEEAQN-AALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
             + +M+ AL  A+  A      P VG V V +   +    ++         HAE+ A+R
Sbjct: 11  DDHRWMAQALRLAERGAYTTRPNPMVGCVIVRDGVCVGEGFHQRAGG----PHAEVFALR 66

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
               +           YVTLEPC        CA A+  A + R+    ++P       G 
Sbjct: 67  AAGELA-----RGATAYVTLEPCAHYGRTPPCALALIDAGVTRVVAAMADPFPQVNGGGF 121

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
                A      E+  G+   ++R + + F
Sbjct: 122 ALLRDAG----IEVLSGVMHAQARTLNRGF 147


>gi|289663675|ref|ZP_06485256.1| riboflavin biosynthesis protein RibD [Xanthomonas campestris pv.
           vasculorum NCPPB702]
          Length = 369

 Score =  102 bits (256), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 34/150 (22%), Positives = 56/150 (37%), Gaps = 21/150 (14%)

Query: 3   KGNVFMSCALEEAQN-AALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
             + +M+ AL  A+  A      P VG V V +   +    ++         HAE+ A+R
Sbjct: 11  DDHRWMAQALRLAERGAYTTRPNPMVGCVIVRDGVCVGEGFHQRAGG----PHAEVFALR 66

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
               +           YVTLEPC        CA A+  A + R+    ++P       G 
Sbjct: 67  AAGELA-----RGATAYVTLEPCAHYGRTPPCALALIDAGVTRVVAAMADPFPQVNGGGF 121

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
                A      E+  G+   ++R + + F
Sbjct: 122 ALLRDAG----IEVLSGVMHAQARTLNRGF 147


>gi|325915009|ref|ZP_08177339.1| cytosine/adenosine deaminase [Xanthomonas vesicatoria ATCC 35937]
 gi|325538779|gb|EGD10445.1| cytosine/adenosine deaminase [Xanthomonas vesicatoria ATCC 35937]
          Length = 151

 Score =  102 bits (256), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 29/135 (21%), Positives = 49/135 (36%), Gaps = 13/135 (9%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +  A+ EA+       IP+GA     + +++    NR  +  D + H E  A R   R  
Sbjct: 11  LDTAIAEARQGLAEGGIPIGAALYHNDGRLLGCGHNRRVQENDPSVHGETDAFRKAGR-- 68

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
            Q    +  +  TL PC  C+  +    I  +  G S    GGI    +        H  
Sbjct: 69  -QRRYKDTIMVTTLAPCWYCSGLVRQFNIGTVVVGESVTFQGGIAWLRE--------HGV 119

Query: 127 EIYPGISEQRSRQII 141
            +   +  Q    ++
Sbjct: 120 NVID-LQSQECIDLL 133


>gi|269965078|ref|ZP_06179243.1| riboflavin-specific deaminase [Vibrio alginolyticus 40B]
 gi|269830381|gb|EEZ84606.1| riboflavin-specific deaminase [Vibrio alginolyticus 40B]
          Length = 375

 Score =  102 bits (256), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 38/154 (24%), Positives = 56/154 (36%), Gaps = 21/154 (13%)

Query: 4   GNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
               MS A++ A+         P VG V V + +I+    +          HAE+ A+RM
Sbjct: 14  DFAMMSRAIKLAKRGIYTTAPNPNVGCVIVRDEEIVGEGYHHRAGE----PHAEVHAMRM 69

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
                          YVTLEPC        CA  +  A++ R+     +P       G Q
Sbjct: 70  AGEKA-----VGATAYVTLEPCSHYGRTPPCAEGLIKAKVARVVCAMVDPNPKVAGRGIQ 124

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
               A      E+  G+ EQ +  +   F K  R
Sbjct: 125 MLRDAG----IEVQIGLLEQDALALNPGFIKYMR 154


>gi|226288486|gb|EEH43998.1| tRNA-specific adenosine deaminase [Paracoccidioides brasiliensis
           Pb18]
          Length = 164

 Score =  102 bits (256), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 29/151 (19%), Positives = 49/151 (32%), Gaps = 45/151 (29%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRE------LKDVTAHAEI 56
           K   FM  AL+  + A    E PVG V V N +II  A + +         K  T     
Sbjct: 16  KHEYFMRKALDMGEEALASGETPVGCVLVHNEEIIGSAVSSSNLRRRRSVEKSPT----- 70

Query: 57  LAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116
                                                RIR +Y+G +N + GG       
Sbjct: 71  ----------------------------------KQYRIRHVYFGCANERFGGTGGVLNL 96

Query: 117 YTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
           ++        E+  G+  + +  +++ F+ +
Sbjct: 97  HSDPGIDPPYELTGGLFRKEAIMLLRRFYIQ 127


>gi|111145470|gb|ABH06955.1| cytidine/deoxycytidylate deaminase family protein [Desulfovibrio
           vulgaris]
          Length = 88

 Score =  102 bits (255), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 29/82 (35%), Positives = 41/82 (50%)

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
              L    L  TLEPC MCA AI  AR+  + YGA +PK G + +  + +     +H P 
Sbjct: 5   NYRLGGTFLVXTLEPCLMCAGAIVHARVEGVVYGAEDPKAGAVTSCLEAFEQPFLNHRPW 64

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
              G+  +    I++DFF  RR
Sbjct: 65  HMGGVRRRACTAILKDFFNGRR 86


>gi|78046250|ref|YP_362425.1| putative cytosine deaminase [Xanthomonas campestris pv. vesicatoria
           str. 85-10]
 gi|78034680|emb|CAJ22325.1| putative cytosine deaminase [Xanthomonas campestris pv. vesicatoria
           str. 85-10]
          Length = 151

 Score =  102 bits (255), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 29/135 (21%), Positives = 49/135 (36%), Gaps = 13/135 (9%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +  A+ EA+       IP+GA     + +++    NR  +  D + H E  A R   R  
Sbjct: 11  LDTAITEARQGLAEGGIPIGAALYHNDGRLLGCGHNRRVQENDPSVHGETDAFRKAGR-- 68

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
            Q    +  +  TL PC  C+  +    I  +  G S    GGI    +        H  
Sbjct: 69  -QRRYKDTIMVTTLAPCWYCSGLVRQFNIGTVVVGESVTFQGGIAWLRE--------HGV 119

Query: 127 EIYPGISEQRSRQII 141
            +   +  Q    ++
Sbjct: 120 NVID-LHSQECIDLL 133


>gi|313904567|ref|ZP_07837942.1| riboflavin biosynthesis protein RibD [Eubacterium cellulosolvens 6]
 gi|313470537|gb|EFR65864.1| riboflavin biosynthesis protein RibD [Eubacterium cellulosolvens 6]
          Length = 367

 Score =  102 bits (255), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 39/146 (26%), Positives = 54/146 (36%), Gaps = 21/146 (14%)

Query: 8   MSCALEEAQ--NAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M  A+E A+           VGAV V + KII    +R         HAE    R   + 
Sbjct: 1   MRRAIELARQGEGWCHPNPMVGAVIVRDGKIIGEGYHRKCGEL----HAE----RNAFQS 52

Query: 66  LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
           L +E      LYVTLEPC        C  AI   +IR++  G+ +P       G +    
Sbjct: 53  L-RESAEGAVLYVTLEPCCHVGRTPPCTEAIIGHKIRKVVIGSRDPNPKVHGKGAELLRR 111

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFF 145
           A      E+      +    +   FF
Sbjct: 112 AG----IEVVEDFLREECDALNDVFF 133


>gi|229157695|ref|ZP_04285770.1| RibD (Riboflavin-specific deaminase) [Bacillus cereus ATCC 4342]
 gi|228625652|gb|EEK82404.1| RibD (Riboflavin-specific deaminase) [Bacillus cereus ATCC 4342]
          Length = 379

 Score =  102 bits (255), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 35/158 (22%), Positives = 58/158 (36%), Gaps = 24/158 (15%)

Query: 3   KGNVFMSCALEEAQ-NAALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
               +M  AL+ A+  +   +  P VGAV V +  I+    +     +    HAE+ A+ 
Sbjct: 11  TDQEYMRIALQLAEGTSGQTSPNPMVGAVVVKDGNIVGMGAHLRAGEE----HAEVHALH 66

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           M              LYVTLEPC        C   +    ++R+     +       NG 
Sbjct: 67  MAGEKA-----KGATLYVTLEPCSHFGKTPPCCDLLLKKGVKRVVIATLDCNPLVSGNGK 121

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF---KERR 149
           +    A      E+   + E  +  + + FF   K +R
Sbjct: 122 RRLEEAG----IEVTTVVLEAEAVLLNRYFFHYMKTKR 155


>gi|221632527|ref|YP_002521748.1| riboflavin biosynthesis protein RibD [Thermomicrobium roseum DSM
           5159]
 gi|221155601|gb|ACM04728.1| riboflavin biosynthesis protein RibD [Thermomicrobium roseum DSM
           5159]
          Length = 382

 Score =  102 bits (255), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 36/142 (25%), Positives = 53/142 (37%), Gaps = 25/142 (17%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56
           +     +M  A+  A+ A  +  +   P VGAV V   +++     +         HAEI
Sbjct: 5   LDTDRYWMQRAIALARRA--QGRVAPNPAVGAVIVREGEVVGEGCTQPPGG----PHAEI 58

Query: 57  LAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGI 110
           +A++        E      LYVTLEPC        C  AI  A IRR+     +P     
Sbjct: 59  VALQRAG-----ERARGATLYVTLEPCAHYGRTPPCVEAIVQAGIRRVVAAILDPFPAVA 113

Query: 111 ENGTQFYTLATCHHSPEIYPGI 132
             G      A      ++  GI
Sbjct: 114 GRGFTLLRQAG----VDVTVGI 131


>gi|166710521|ref|ZP_02241728.1| cytosine deaminase [Xanthomonas oryzae pv. oryzicola BLS256]
          Length = 151

 Score =  102 bits (255), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 29/135 (21%), Positives = 49/135 (36%), Gaps = 13/135 (9%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +  A+ EA+       IP+GA     + +++    NR  +  D + H E  A R   R  
Sbjct: 11  LDTAITEARQGLAEGGIPIGAALYHNDGRLLGCGHNRRVQENDPSVHGETDAFRKAGR-- 68

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
            Q    +  +  TL PC  C+  +    I  +  G S    GGI    +        H  
Sbjct: 69  -QRRYKDTIMVTTLAPCWYCSGLVRQFNIGTVVVGESVTFQGGIAWLRE--------HGV 119

Query: 127 EIYPGISEQRSRQII 141
            +   +  Q    ++
Sbjct: 120 NVID-LQSQECIDLL 133


>gi|288555991|ref|YP_003427926.1| riboflavin specific deaminase [Bacillus pseudofirmus OF4]
 gi|288547151|gb|ADC51034.1| riboflavin specific deaminase [Bacillus pseudofirmus OF4]
          Length = 360

 Score =  102 bits (255), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 34/153 (22%), Positives = 58/153 (37%), Gaps = 25/153 (16%)

Query: 3   KGNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           K   +M  AL  A+    R +    P VG+V V +  I+    +          HAE+ A
Sbjct: 2   KDIDYMKLALTLAEQ--TRGQTSPNPMVGSVVVKDGAIVGMGAHLKAGEG----HAEVNA 55

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
           ++M              +YVTLEPC        CA  I   +++R+     +P       
Sbjct: 56  LKMAGEKA-----EGATIYVTLEPCSHYGKTPPCADLIIEKQLKRVVVATVDPNPEVSGR 110

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
           G +    +       +  G+ E  + ++ + FF
Sbjct: 111 GIKRLRDSG----ITVDVGVCEAEAIELNRMFF 139


>gi|239502078|ref|ZP_04661388.1| pyrimidine deaminase [Acinetobacter baumannii AB900]
          Length = 361

 Score =  102 bits (255), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 40/155 (25%), Positives = 62/155 (40%), Gaps = 21/155 (13%)

Query: 1   MKKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           +K+   +M  A+E A+         P VG V V +N++I    +     K    HAE+ A
Sbjct: 4   LKQDQYWMQQAIELAKRGLYSTKPNPNVGCVIVKDNQLIGEGFH----PKAGQPHAEVFA 59

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
           +R                YVTLEPC        CA A+  A+++++     +P       
Sbjct: 60  LREAGEQAQ-----GATAYVTLEPCAHYGRTPPCAEALVKAQVKKVVVACPDPNPLVAGK 114

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
           G Q       +   E+  GI E  + Q+ Q F K 
Sbjct: 115 GVQILE----NAGIEVEIGICEDLAAQLNQGFLKA 145


>gi|320016370|gb|ADV99941.1| tRNA-specific adenosine deaminase [Yersinia pestis biovar
           Medievalis str. Harbin 35]
          Length = 369

 Score =  102 bits (255), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 35/157 (22%), Positives = 54/157 (34%), Gaps = 21/157 (13%)

Query: 1   MKKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           M+    +M+ A E  +      +  P VG V V + +I+    +          HAE+ A
Sbjct: 1   MQPDEFYMARAFELVRLGRFTTSPNPNVGCVLVRDGEIVGEGYHLRAGE----PHAEVHA 56

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
           +RM               YVTLEPC        CA A+  A + R+     +P       
Sbjct: 57  LRMAGEKA-----RGATAYVTLEPCSHYGRTPPCADALVAAGVIRVVAAMQDPNPEVAGR 111

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
           G      A       +  G+    +  +   F K  R
Sbjct: 112 GLYKLKQAG----IAVDHGLMLAEAEAVNLGFLKRMR 144


>gi|220909715|ref|YP_002485026.1| riboflavin biosynthesis protein RibD [Cyanothece sp. PCC 7425]
 gi|219866326|gb|ACL46665.1| riboflavin biosynthesis protein RibD [Cyanothece sp. PCC 7425]
          Length = 392

 Score =  102 bits (255), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 36/149 (24%), Positives = 53/149 (35%), Gaps = 21/149 (14%)

Query: 4   GNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
             + M   L  A+ A       P VG V V + +I+    +          HAE+ A+R 
Sbjct: 25  DQIMMQRCLTLARQAQGQTAPNPLVGCVIVKDGEIVGEGFHPKAGE----PHAEVFALRA 80

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
                  +      LYV LEPC        C+ A+  A I R+  G  +P       G  
Sbjct: 81  AG-----DRAVGATLYVNLEPCNHYGRTPPCSEAVVKAGIGRVVVGMVDPDPRVSGGGIA 135

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDF 144
               A      E+  G+ E   R + + F
Sbjct: 136 RLRAAG----IEVTVGVEEMACRDLNEAF 160


>gi|13472273|ref|NP_103840.1| hypothetical protein mll2512 [Mesorhizobium loti MAFF303099]
 gi|14023018|dbj|BAB49626.1| mll2512 [Mesorhizobium loti MAFF303099]
          Length = 156

 Score =  102 bits (255), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 34/109 (31%), Positives = 44/109 (40%), Gaps = 8/109 (7%)

Query: 1   MKKGNVF--MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEIL 57
           M +  +F  +  A + A+ AA     P G V V  ++ I+ R GN      +   HAE  
Sbjct: 1   MTRDQMFAHLRAANDVAREAAAHGHHPFGCVLVGPDDHILMRQGN-----INTVRHAETE 55

Query: 58  AIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPK 106
             R        E L    L  T EPC MC   +  A I RL YG    K
Sbjct: 56  LGRRAADAYPPEFLWSCTLVSTGEPCAMCTGTLYWANIGRLVYGFEETK 104


>gi|188990100|ref|YP_001902110.1| cytosine deaminase [Xanthomonas campestris pv. campestris str.
           B100]
 gi|167731860|emb|CAP50044.1| cytosine deaminase [Xanthomonas campestris pv. campestris]
          Length = 151

 Score =  102 bits (255), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 29/135 (21%), Positives = 50/135 (37%), Gaps = 13/135 (9%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +  A+ EA+       IP+GA     + +++    NR  +  D + H E  A R   R  
Sbjct: 11  LDTAIAEARQGLAEGGIPIGAALYHSDGRLLGCGHNRRVQENDPSVHGETDAFRKAGR-- 68

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
            Q    +  +  TL PC  C+  +    I  +  G S    GGI+   +        H  
Sbjct: 69  -QRRYQDTIMVTTLAPCWYCSGLVRQFNIGTVVVGESVTFQGGIDWLRE--------HGV 119

Query: 127 EIYPGISEQRSRQII 141
            +   +  Q    ++
Sbjct: 120 TVID-MQSQECMDLL 133


>gi|291534448|emb|CBL07560.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase
           /5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Roseburia intestinalis M50/1]
          Length = 366

 Score =  102 bits (255), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 36/153 (23%), Positives = 57/153 (37%), Gaps = 19/153 (12%)

Query: 1   MKKGNVFMSCALEEAQ--NAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           M++   +M  A+E A+      +    VGAV V  ++II    ++         HAE  A
Sbjct: 1   MQQ-ERYMRRAMELAELGRGWTKTNPVVGAVLVKEDRIIGEGYHKKFGGL----HAEREA 55

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
           +         E     DLYVTLEPC        C  A+  A I  ++ GA +        
Sbjct: 56  L--ADCRSRGEDPAGADLYVTLEPCCHYGKTPPCTQAVIEAGISHVFVGAEDINPLVAGA 113

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
           G +            +  G+ ++      + FF
Sbjct: 114 GIRQLREQGIL----VTEGVLQEECEYQNRVFF 142


>gi|146310543|ref|YP_001175617.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Enterobacter sp. 638]
 gi|145317419|gb|ABP59566.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Enterobacter sp.
           638]
          Length = 367

 Score =  102 bits (255), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 34/155 (21%), Positives = 55/155 (35%), Gaps = 21/155 (13%)

Query: 3   KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +  ++M+ AL+ AQ      +  P VG V V +  I+    +          HAE+ A+R
Sbjct: 2   QDEIYMARALKLAQRGRFTTHPNPNVGCVIVKDGVIVGEGFHYRAGE----PHAEVHALR 57

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           M               YVTLEPC        C  A+  A + R+     +P       G 
Sbjct: 58  MAGEKA-----RGATAYVTLEPCSHHGRTPPCCEALIDAGVARVVAAMQDPNPQVAGRGL 112

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
                       ++  G+    +  + + F K  R
Sbjct: 113 YRLQQEG----IDVSHGLMMADTEALNKGFLKRMR 143


>gi|71898908|ref|ZP_00681075.1| Riboflavin biosynthesis protein RibD:Riboflavin-specific deaminase,
           C-terminal [Xylella fastidiosa Ann-1]
 gi|71731320|gb|EAO33384.1| Riboflavin biosynthesis protein RibD:Riboflavin-specific deaminase,
           C-terminal [Xylella fastidiosa Ann-1]
          Length = 364

 Score =  102 bits (255), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 35/150 (23%), Positives = 56/150 (37%), Gaps = 21/150 (14%)

Query: 3   KGNVFMSCALEEAQN-AALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
             +  M  AL  A+  A      P VG V V + +++    ++     D   HAE+ A+ 
Sbjct: 7   DDHRHMERALCLAERGAYTTRPNPMVGCVIVRDGEVVGEGWHQR--AGDP--HAEVFALC 62

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
               +           YVTLEPC        CA A+  A +RR+     +P       G 
Sbjct: 63  AAGDLA-----RGATAYVTLEPCAHSGRTPPCAMALIDAGVRRVVAAMVDPFPLVNGGGV 117

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
                A       +  G+ E ++R + + F
Sbjct: 118 TLLRAAG----VTVEHGLMEAQARALNRGF 143


>gi|262373927|ref|ZP_06067204.1| riboflavin biosynthesis protein RibD [Acinetobacter junii SH205]
 gi|262310938|gb|EEY92025.1| riboflavin biosynthesis protein RibD [Acinetobacter junii SH205]
          Length = 366

 Score =  102 bits (255), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 38/155 (24%), Positives = 63/155 (40%), Gaps = 21/155 (13%)

Query: 1   MKKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           + +   +M  A++ A+         P VG V V + KII    +     K    HAE+ A
Sbjct: 9   LSENQYWMQQAIDLARRGQYSTKPNPNVGCVIVKDGKIIGEGFH----PKAGQPHAEVFA 64

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
           +R        E   +   YVTLEPC        CA A+  A+++++    S+P       
Sbjct: 65  LRQAG-----ENAKDATAYVTLEPCAHFGRTPPCAEALVKAQVKKVVVACSDPNPLVAGK 119

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
           G +    A      E+  GI ++ ++ +   F K 
Sbjct: 120 GVKILQDAG----IEVETGICDEEAKTLNFGFLKA 150


>gi|293610032|ref|ZP_06692333.1| hypothetical protein HMPREF0013_02182 [Acinetobacter sp. SH024]
 gi|292827264|gb|EFF85628.1| hypothetical protein HMPREF0013_02182 [Acinetobacter sp. SH024]
          Length = 361

 Score =  102 bits (255), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 39/155 (25%), Positives = 64/155 (41%), Gaps = 21/155 (13%)

Query: 1   MKKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           +K+   +M  A+E A+         P VG V V ++++I +  +     K    HAE+ A
Sbjct: 4   LKQDQYWMQQAIELAKRGLYSTKPNPNVGCVIVKDDQLIGQGFH----PKAGQPHAEVFA 59

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
           +R        E       YVTLEPC        CA A+  A+++++     +P       
Sbjct: 60  LREAG-----EHAQGATAYVTLEPCAHYGRTPPCAEALVKAQVKKVVVACPDPNPLVAGK 114

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
           G Q       +   E+  GI E  + ++ Q F K 
Sbjct: 115 GVQILE----NAGIEVEVGICEDLASKLNQGFLKA 145


>gi|295135421|ref|YP_003586097.1| bifunctional riboflavin biosynthesis protein RibD [Zunongwangia
           profunda SM-A87]
 gi|294983436|gb|ADF53901.1| bifunctional riboflavin biosynthesis protein RibD [Zunongwangia
           profunda SM-A87]
          Length = 348

 Score =  102 bits (255), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 33/150 (22%), Positives = 64/150 (42%), Gaps = 19/150 (12%)

Query: 4   GNVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
              ++   L+ A+N          VG+V V  N+II    ++         HAE+ A+  
Sbjct: 6   HEKYIKRCLQLAENGLGSTYPNPMVGSVIVYKNQIIGEGWHQKAGE----PHAEVNAVNS 61

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
              + ++++L +  +YV+LEPC        C+  I    I+++     +P       G +
Sbjct: 62  ---VKNRDLLKKSTIYVSLEPCSHFGKTPPCSDLIIAKGIKKVVVATVDPFAEVAGRGIK 118

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
               A C    ++  G+ EQ ++ + + FF
Sbjct: 119 KLMEAGC----DVTLGVLEQEAQHLNKRFF 144


>gi|71066695|ref|YP_265422.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Psychrobacter arcticus 273-4]
 gi|71039680|gb|AAZ19988.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Psychrobacter arcticus 273-4]
          Length = 351

 Score =  102 bits (255), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 35/155 (22%), Positives = 57/155 (36%), Gaps = 21/155 (13%)

Query: 3   KGNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           K   FM  A+E+A+      R    VG V V   +++ +  +          HAE+ A++
Sbjct: 11  KDRYFMMLAIEQAKLGLYSTRPNPAVGCVIVQAEEVVGQGFHPKVGQ----PHAEVFALK 66

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
                           YVTLEPC        CA A+  + + R+     +P       G 
Sbjct: 67  DAG-----IRAVGATAYVTLEPCSHTGRTPPCAKALIESGVIRVVVAGLDPNPQVAGRGV 121

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
           +    A      E+  GI   ++  + + F K  R
Sbjct: 122 RLLEQAG----IEVTVGILTAQAEVLNKGFLKAMR 152


>gi|294632878|ref|ZP_06711437.1| cytosine deaminase [Streptomyces sp. e14]
 gi|292830659|gb|EFF89009.1| cytosine deaminase [Streptomyces sp. e14]
          Length = 160

 Score =  102 bits (255), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 27/99 (27%), Positives = 45/99 (45%), Gaps = 1/99 (1%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
               +  A+  A  A  + + P G++    +  +++ A N  R   D+TAH E+   R  
Sbjct: 21  DETLLRRAIGIAARAVEQGDAPYGSLLAGPDGAVLAEAHNTVRRDDDITAHPELKLARWA 80

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
            R L      +V +Y + +PC MCA  I  + I R+ Y 
Sbjct: 81  ARELDPRTAADVTMYTSCQPCGMCAGGILRSGIGRVVYA 119


>gi|192359452|ref|YP_001983157.1| riboflavin biosynthesis protein RibD [Cellvibrio japonicus Ueda107]
 gi|190685617|gb|ACE83295.1| riboflavin biosynthesis protein RibD [Cellvibrio japonicus Ueda107]
          Length = 383

 Score =  102 bits (255), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 39/160 (24%), Positives = 64/160 (40%), Gaps = 26/160 (16%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           +  + FM+ AL  A+       +P   VG V V N +II+   +          HAE+ A
Sbjct: 5   RDDHRFMARALRLAERGLYTT-MPNPRVGCVLVKNQQIIAEGWHVRAGEG----HAEVNA 59

Query: 59  IRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIEN 112
           +R+       E       YVTLEPC        C+ A+  A + R+ Y   +P       
Sbjct: 60  LRIAA-----EQARGATAYVTLEPCNHTGKTGPCSQALIDAGVARVVYAMEDPNPLVSGR 114

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF---KERR 149
           G +    A      E+   + E+++R +   F    + +R
Sbjct: 115 GLERLAAAG----IEVDGPLFEEQARALNPGFITRMERKR 150


>gi|189424808|ref|YP_001951985.1| riboflavin biosynthesis protein RibD [Geobacter lovleyi SZ]
 gi|189421067|gb|ACD95465.1| riboflavin biosynthesis protein RibD [Geobacter lovleyi SZ]
          Length = 367

 Score =  102 bits (255), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 37/153 (24%), Positives = 58/153 (37%), Gaps = 21/153 (13%)

Query: 2   KKGNVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
                +M  A+  A+    R      VG V V +  I+    +     K  T HAE+   
Sbjct: 3   TSDIAYMKRAISLARKGLGRTAPNPAVGCVIVCDGVIVGEGWH----KKAGTPHAEVH-- 56

Query: 60  RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113
                 ++       D+YVTLEPC        C  A+  A +RR+  G  +P       G
Sbjct: 57  ---ALAMAGAAAKGADVYVTLEPCCHHGKTPPCCDALIAAGVRRVVAGMVDPFLQVAGKG 113

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
            Q    A       +  G+ EQ+ +++ + F K
Sbjct: 114 LQTLRQAG----VRVEVGLLEQQCKELNKGFIK 142


>gi|30264187|ref|NP_846564.1| riboflavin biosynthesis protein RibD [Bacillus anthracis str. Ames]
 gi|47529628|ref|YP_020977.1| riboflavin biosynthesis protein RibD [Bacillus anthracis str. 'Ames
           Ancestor']
 gi|49187016|ref|YP_030268.1| riboflavin biosynthesis protein RibD [Bacillus anthracis str.
           Sterne]
 gi|165871134|ref|ZP_02215784.1| riboflavin biosynthesis protein RibD [Bacillus anthracis str.
           A0488]
 gi|167633706|ref|ZP_02392030.1| riboflavin biosynthesis protein RibD [Bacillus anthracis str.
           A0442]
 gi|167639402|ref|ZP_02397673.1| riboflavin biosynthesis protein RibD [Bacillus anthracis str.
           A0193]
 gi|170687109|ref|ZP_02878327.1| riboflavin biosynthesis protein RibD [Bacillus anthracis str.
           A0465]
 gi|170705665|ref|ZP_02896128.1| riboflavin biosynthesis protein RibD [Bacillus anthracis str.
           A0389]
 gi|177652658|ref|ZP_02935074.1| riboflavin biosynthesis protein RibD [Bacillus anthracis str.
           A0174]
 gi|190566211|ref|ZP_03019130.1| riboflavin biosynthesis protein RibD [Bacillus anthracis
           Tsiankovskii-I]
 gi|196035025|ref|ZP_03102432.1| riboflavin biosynthesis protein RibD [Bacillus cereus W]
 gi|218905249|ref|YP_002453083.1| riboflavin biosynthesis protein RibD [Bacillus cereus AH820]
 gi|227816888|ref|YP_002816897.1| riboflavin biosynthesis protein RibD [Bacillus anthracis str. CDC
           684]
 gi|229603428|ref|YP_002868410.1| riboflavin biosynthesis protein RibD [Bacillus anthracis str.
           A0248]
 gi|254683878|ref|ZP_05147738.1| riboflavin biosynthesis protein RibD [Bacillus anthracis str.
           CNEVA-9066]
 gi|254721713|ref|ZP_05183502.1| riboflavin biosynthesis protein RibD [Bacillus anthracis str.
           A1055]
 gi|254736225|ref|ZP_05193931.1| riboflavin biosynthesis protein RibD [Bacillus anthracis str.
           Western North America USA6153]
 gi|254744115|ref|ZP_05201798.1| riboflavin biosynthesis protein RibD [Bacillus anthracis str.
           Kruger B]
 gi|254754105|ref|ZP_05206140.1| riboflavin biosynthesis protein RibD [Bacillus anthracis str.
           Vollum]
 gi|254758204|ref|ZP_05210231.1| riboflavin biosynthesis protein RibD [Bacillus anthracis str.
           Australia 94]
 gi|30258832|gb|AAP28050.1| riboflavin biosynthesis protein RibD [Bacillus anthracis str. Ames]
 gi|47504776|gb|AAT33452.1| riboflavin biosynthesis protein RibD [Bacillus anthracis str. 'Ames
           Ancestor']
 gi|49180943|gb|AAT56319.1| riboflavin biosynthesis protein RibD [Bacillus anthracis str.
           Sterne]
 gi|164713053|gb|EDR18580.1| riboflavin biosynthesis protein RibD [Bacillus anthracis str.
           A0488]
 gi|167512461|gb|EDR87836.1| riboflavin biosynthesis protein RibD [Bacillus anthracis str.
           A0193]
 gi|167531112|gb|EDR93799.1| riboflavin biosynthesis protein RibD [Bacillus anthracis str.
           A0442]
 gi|170129205|gb|EDS98069.1| riboflavin biosynthesis protein RibD [Bacillus anthracis str.
           A0389]
 gi|170668726|gb|EDT19471.1| riboflavin biosynthesis protein RibD [Bacillus anthracis str.
           A0465]
 gi|172081993|gb|EDT67061.1| riboflavin biosynthesis protein RibD [Bacillus anthracis str.
           A0174]
 gi|190563130|gb|EDV17096.1| riboflavin biosynthesis protein RibD [Bacillus anthracis
           Tsiankovskii-I]
 gi|195992564|gb|EDX56525.1| riboflavin biosynthesis protein RibD [Bacillus cereus W]
 gi|218537200|gb|ACK89598.1| riboflavin biosynthesis protein RibD [Bacillus cereus AH820]
 gi|227005412|gb|ACP15155.1| riboflavin biosynthesis protein RibD [Bacillus anthracis str. CDC
           684]
 gi|229267836|gb|ACQ49473.1| riboflavin biosynthesis protein RibD [Bacillus anthracis str.
           A0248]
          Length = 370

 Score =  102 bits (255), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 34/158 (21%), Positives = 56/158 (35%), Gaps = 24/158 (15%)

Query: 3   KGNVFMSCALEEAQN--AALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
               +M  AL+ A+           VGAV V +  I+    +     +    HAE+ A+ 
Sbjct: 2   TDQEYMRIALQLAEGTCGQTSPNPMVGAVVVKDGNIVGMGAHLRAGEE----HAEVHALH 57

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           M              +YVTLEPC        C   +    ++R+     +       NG 
Sbjct: 58  MAGDKA-----KGATVYVTLEPCSHFGKTPPCCELLIKKEVKRVVIATLDCNPLVSGNGK 112

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF---KERR 149
           +    A      E+  G+ E  +  + + FF   K +R
Sbjct: 113 RKLEEAG----IEVTTGVLEAEAVLLNRYFFHYMKTKR 146


>gi|88803651|ref|ZP_01119175.1| riboflavin biosynthesis protein ribD [Polaribacter irgensii 23-P]
 gi|88780384|gb|EAR11565.1| riboflavin biosynthesis protein ribD [Polaribacter irgensii 23-P]
          Length = 354

 Score =  102 bits (255), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 39/160 (24%), Positives = 62/160 (38%), Gaps = 22/160 (13%)

Query: 1   MKKGNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           M +   ++   L+ A+N     R    VGAV V    I+               HAE+ A
Sbjct: 1   MIRHEQYIQRCLQIAKNGIGTTRPNPSVGAVIVCKGVIVGEGFTAAYGGN----HAEVNA 56

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
           +     +  +++L E  LYVTLEPC        CA  I    I+R+  G  +        
Sbjct: 57  VNS---VEHKKLLVESTLYVTLEPCSHFGKTPPCADLIIKYNIKRVVIGCVDTNSLVAGQ 113

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF---KERR 149
           G +    A       +  G+ E   R+  + FF   +++R
Sbjct: 114 GIERLKSAG----VVVTVGVLEAECRKHHKRFFVVQEKKR 149


>gi|56965745|ref|YP_177479.1| riboflavin biosynthesis protein RibD [Bacillus clausii KSM-K16]
 gi|56911991|dbj|BAD66518.1| riboflavin biosynthesis protein RibD [Bacillus clausii KSM-K16]
          Length = 367

 Score =  102 bits (255), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 39/150 (26%), Positives = 59/150 (39%), Gaps = 25/150 (16%)

Query: 5   NVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
             +M  AL+ A+  A++ +    P VG V V   +II    +         AHAEI A+R
Sbjct: 3   ERYMRLALDNAK--AMKGQTDPNPLVGCVLVKEGRIIGVGAHLKAGE----AHAEINALR 56

Query: 61  MGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGT 114
           M               YVTLEPC+       CA  +  A ++ +     +P      NG 
Sbjct: 57  MAG-----SEAKGSTAYVTLEPCSHTGRTGPCAVELVEAGVKEVIIATLDPNPLVSGNGV 111

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
           +       H    +  GI E+ + Q+   F
Sbjct: 112 RILEEGGVH----VQTGILEKEAVQLNDVF 137


>gi|46446676|ref|YP_008041.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Candidatus Protochlamydia amoebophila UWE25]
 gi|46400317|emb|CAF23766.1| probable diaminohydroxyphosphoribosylaminopyrimidine deaminase /
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Candidatus Protochlamydia amoebophila UWE25]
          Length = 368

 Score =  102 bits (255), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 45/154 (29%), Positives = 60/154 (38%), Gaps = 26/154 (16%)

Query: 1   MKK---GNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHA 54
           MK     + FM  A+ E+  A L    P   VG V V + KII +            AHA
Sbjct: 1   MKNSEIHHTFMLEAIAESWKARLHA-PPNPWVGCVIVKDQKIIGKGY----TYPSGQAHA 55

Query: 55  EILAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGG 108
           EI A++        E      LYVTLEPC        C  AI  A I  +Y    +P   
Sbjct: 56  EINALKSA-----SENAKGASLYVTLEPCSHHGKTPPCTEAIIRAGILNVYVALKDPDSR 110

Query: 109 GIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQ 142
               G Q    A  H    +  GI E+ ++ ++ 
Sbjct: 111 VRGQGIQKLREAGIH----VKVGIGEKEAKVVLT 140


>gi|298244121|ref|ZP_06967927.1| CMP/dCMP deaminase zinc-binding [Ktedonobacter racemifer DSM 44963]
 gi|297551602|gb|EFH85467.1| CMP/dCMP deaminase zinc-binding [Ktedonobacter racemifer DSM 44963]
          Length = 170

 Score =  101 bits (254), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 40/146 (27%), Positives = 68/146 (46%), Gaps = 8/146 (5%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
               M+  L  A  A  +  + + A+    ++I+    N+ +E +D   HAE++ +R   
Sbjct: 12  DEKMMARTLAYANAALDKGSVGIAALLSRRDEILDLEHNQFQETRDAIDHAEMVVLRRMA 71

Query: 64  RILSQ---EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
           R LSQ   E   E+ LY +LEPC MC AAIS A ++R+ + A N  G       +  T  
Sbjct: 72  RYLSQLSEEEKRELTLYSSLEPCLMCMAAISFAGLKRVVFSAYNADGTDEVTVARGLTSE 131

Query: 121 TCHHS-----PEIYPGISEQRSRQII 141
             + +       +  G+  +  R+I+
Sbjct: 132 QVNQALTRGPLTLLGGVQREEGREIL 157


>gi|228929160|ref|ZP_04092187.1| RibD (Riboflavin-specific deaminase) [Bacillus thuringiensis
           serovar pondicheriensis BGSC 4BA1]
 gi|228947830|ref|ZP_04110117.1| RibD (Riboflavin-specific deaminase) [Bacillus thuringiensis
           serovar monterrey BGSC 4AJ1]
 gi|228811817|gb|EEM58151.1| RibD (Riboflavin-specific deaminase) [Bacillus thuringiensis
           serovar monterrey BGSC 4AJ1]
 gi|228830450|gb|EEM76060.1| RibD (Riboflavin-specific deaminase) [Bacillus thuringiensis
           serovar pondicheriensis BGSC 4BA1]
          Length = 379

 Score =  101 bits (254), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 34/158 (21%), Positives = 56/158 (35%), Gaps = 24/158 (15%)

Query: 3   KGNVFMSCALEEAQN--AALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
               +M  AL+ A+           VGAV V +  I+    +     +    HAE+ A+ 
Sbjct: 11  TDQEYMRIALQLAEGTCGQTSPNPMVGAVVVKDGNIVGMGAHLRAGEE----HAEVHALH 66

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           M              +YVTLEPC        C   +    ++R+     +       NG 
Sbjct: 67  MAGDKA-----KGATVYVTLEPCSHFGKTPPCCELLIKKEVKRVVIATLDCNPLVSGNGK 121

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF---KERR 149
           +    A      E+  G+ E  +  + + FF   K +R
Sbjct: 122 RKLEEAG----IEVTTGVLEAEAVLLNRYFFHYMKTKR 155


>gi|283851293|ref|ZP_06368575.1| riboflavin biosynthesis protein RibD [Desulfovibrio sp. FW1012B]
 gi|283573243|gb|EFC21221.1| riboflavin biosynthesis protein RibD [Desulfovibrio sp. FW1012B]
          Length = 383

 Score =  101 bits (254), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 36/154 (23%), Positives = 57/154 (37%), Gaps = 23/154 (14%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56
           M     FM+ AL  A+    R  +   P VGAV V +  I++   ++         HAE+
Sbjct: 1   MASDADFMARALVLAERG--RGFVTPNPRVGAVLVRDGAIVAEGWHKVFGG----PHAEV 54

Query: 57  LAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGI 110
             +    +           +YVTLEPC        C+  +  AR+ R+  G  +P     
Sbjct: 55  ECLHDAEKKGVDP--AGATMYVTLEPCNHFGKTPPCSRTLLDARVGRVVVGCLDPNP-VA 111

Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
             G +           ++  G+     R  I DF
Sbjct: 112 GGGAELLRQGG----VDVTVGVLALECRDAIADF 141


>gi|257877850|ref|ZP_05657503.1| riboflavin biosynthesis protein RibD [Enterococcus casseliflavus
           EC20]
 gi|257812016|gb|EEV40836.1| riboflavin biosynthesis protein RibD [Enterococcus casseliflavus
           EC20]
          Length = 358

 Score =  101 bits (254), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 37/139 (26%), Positives = 53/139 (38%), Gaps = 19/139 (13%)

Query: 4   GNVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
            N +M  A+ EA+    +      VGAV V   ++I++  +          HAE  AI  
Sbjct: 2   HNEYMRLAIAEAKKGRYQTFTNPLVGAVIVKEQRVIAKGAHLVYGQ----PHAERNAIEQ 57

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
                  E L    LYVTLEPC        C   I  + I+++  G  +P       G Q
Sbjct: 58  ---CHFSEDLINSTLYVTLEPCNHQGKQPPCTQLIIDSGIKKVVIGQLDPNPIVAGQGKQ 114

Query: 116 FYTLATCHHSPEIYPGISE 134
           F          ++  GI E
Sbjct: 115 FLEEQG----IDVLVGIEE 129


>gi|229104716|ref|ZP_04235378.1| RibD (Riboflavin-specific deaminase) [Bacillus cereus Rock3-28]
 gi|228678780|gb|EEL32995.1| RibD (Riboflavin-specific deaminase) [Bacillus cereus Rock3-28]
          Length = 379

 Score =  101 bits (254), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 34/158 (21%), Positives = 59/158 (37%), Gaps = 24/158 (15%)

Query: 3   KGNVFMSCALEEAQ-NAALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
               +M  AL+ A+  +   +  P VGAV V +  I+    +     +    HAE+ A+ 
Sbjct: 11  TDQEYMRIALQLAKGTSGQTSPNPMVGAVVVKDGNIVGMGAHLRAGEE----HAEVHALH 66

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           M              +YVTLEPC        C   +    ++R+     +       NG 
Sbjct: 67  MAGEKAKN-----ATVYVTLEPCSHFGKTPPCCELLIEKGVKRIVIATLDCNPLVSGNGK 121

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF---KERR 149
           +    A      ++  G+ E  +  + + FF   K +R
Sbjct: 122 KKLEEAG----IKVTTGVLETEAVLLNRYFFHYMKTKR 155


>gi|297567806|ref|YP_003686777.1| hypothetical protein Mesil_3462 [Meiothermus silvanus DSM 9946]
 gi|296852255|gb|ADH65269.1| hypothetical protein Mesil_3462 [Meiothermus silvanus DSM 9946]
          Length = 383

 Score =  101 bits (254), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 37/151 (24%), Positives = 56/151 (37%), Gaps = 22/151 (14%)

Query: 4   GNVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
              FM  ALE A     R     PVG V V   +++ R  +          HAE+LA+R 
Sbjct: 6   DVAFMRQALELAAQGIGRTSPNPPVGCVLVRGAEVVGRGFHPRAGE----PHAEVLALRQ 61

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
                  E       Y+TLEPC        CA A+  A + R+    ++P       G +
Sbjct: 62  AG-----ERAQGATAYITLEPCAHYGRTPPCAQALIEAGVARVVVATTDPNPQVSGRGLE 116

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
               A       +  G+    + +  Q+ F+
Sbjct: 117 QLARAG----VAVTTGLLRDEAERQ-QEVFR 142


>gi|226506666|ref|NP_001147339.1| cytidine/deoxycytidylate deaminase family protein [Zea mays]
 gi|195610278|gb|ACG26969.1| cytidine/deoxycytidylate deaminase family protein [Zea mays]
          Length = 184

 Score =  101 bits (254), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 36/121 (29%), Positives = 56/121 (46%), Gaps = 11/121 (9%)

Query: 2   KKGNVFMSCALEEAQNAAL--RNEIPVGAVAVLNNKII---------SRAGNRNRELKDV 50
           ++    ++ A++EA  A        P GAV V               S + N  R+  D 
Sbjct: 18  RRDYRLIAKAVDEAYRAVECDGGGYPFGAVVVRVGGGGGDGDDDEVVSSSHNSVRKDADP 77

Query: 51  TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI 110
           +AHAE+ AIR  C+ L +  L   ++Y + EPC MC   I LA+I+++ YGA +      
Sbjct: 78  SAHAEVTAIRQACKKLGKTSLSGCEIYTSCEPCPMCLGLIRLAKIKKVVYGAKSEVAAAA 137

Query: 111 E 111
            
Sbjct: 138 G 138


>gi|187927760|ref|YP_001898247.1| riboflavin biosynthesis protein RibD [Ralstonia pickettii 12J]
 gi|187724650|gb|ACD25815.1| riboflavin biosynthesis protein RibD [Ralstonia pickettii 12J]
          Length = 370

 Score =  101 bits (254), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 36/150 (24%), Positives = 55/150 (36%), Gaps = 20/150 (13%)

Query: 4   GNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
            +  M  AL  A+        P   VG V V ++ +I     +         HAEI AI+
Sbjct: 6   DHAMMQRALALAEKGLFTT-TPNPRVGCVIVRDDTVIGEGYTQPAGQD----HAEIQAIK 60

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
                   + +     YVTLEPC        CA  +  A I R+     +P       G 
Sbjct: 61  DA--QSRGQDVRGATAYVTLEPCSHFGRTPPCADRLVEAGITRVVAAMEDPNPAVSGRGL 118

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
           Q    A      ++  G+ E+ +R++   F
Sbjct: 119 QKLRDAG----VDVRCGLLEREARELNIGF 144


>gi|323527043|ref|YP_004229196.1| riboflavin biosynthesis protein RibD [Burkholderia sp. CCGE1001]
 gi|323384045|gb|ADX56136.1| riboflavin biosynthesis protein RibD [Burkholderia sp. CCGE1001]
          Length = 385

 Score =  101 bits (254), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 36/151 (23%), Positives = 56/151 (37%), Gaps = 18/151 (11%)

Query: 2   KKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
           +   V M  AL  A+      +  P VG V V N ++I     +         HAEI A+
Sbjct: 4   QTDFVHMERALALAKRGMYTTDPNPRVGCVIVQNGEVIGEGFTQPAGQD----HAEIRAM 59

Query: 60  RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113
           +          L    +YVTLEPC        CA A+  A++ R+     +P       G
Sbjct: 60  KDA--RSRGHDLRGATVYVTLEPCSHFGRTPPCANALIEAQVARVVAAMEDPNPQVSGRG 117

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
                 A      E+  G+    ++++   F
Sbjct: 118 LAMLRDAG----IEVRCGLLANEAQELNIGF 144


>gi|317486652|ref|ZP_07945469.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Bilophila wadsworthia 3_1_6]
 gi|316922035|gb|EFV43304.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Bilophila wadsworthia 3_1_6]
          Length = 116

 Score =  101 bits (254), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 34/110 (30%), Positives = 52/110 (47%), Gaps = 7/110 (6%)

Query: 43  RNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG- 101
              E  D TAHAEI+AIR   + L Q  L + +L+ T EPC  C AA   A I R+YYG 
Sbjct: 1   MVFETLDPTAHAEIVAIRNATQKLGQLDLSDCELFTTCEPCPQCLAATYWAGISRIYYGI 60

Query: 102 --ASNPKGG--GIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
               N K G  G +   + +          ++    E   ++++ ++ K+
Sbjct: 61  TQEENVKMGFPGAKRMYEAFEKHGSDKQVVVFA--YEDICQKLMAEWLKK 108


>gi|157960990|ref|YP_001501024.1| riboflavin biosynthesis protein RibD [Shewanella pealeana ATCC
           700345]
 gi|157845990|gb|ABV86489.1| riboflavin biosynthesis protein RibD [Shewanella pealeana ATCC
           700345]
          Length = 373

 Score =  101 bits (254), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 35/153 (22%), Positives = 57/153 (37%), Gaps = 21/153 (13%)

Query: 3   KGNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           + +  MS A+E AQ      R    VG+V V + +I+    +          HAE+ A+ 
Sbjct: 5   EDSQMMSLAIELAQKGMYTTRPNPSVGSVIVKDGEIVGEGYHIRAGG----PHAEVYALN 60

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           M               YVTLEPC        CA A+    + R+    ++P       G 
Sbjct: 61  MAG-----SDAKGATAYVTLEPCSHYGRTPPCAKALIEHGVSRVVIAVTDPNPEVSGRGI 115

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
                A      ++  G+  + ++Q+   F K 
Sbjct: 116 AMLRDAGI--RVDV--GLMTEEAKQVNLGFLKR 144


>gi|157364177|ref|YP_001470944.1| CMP/dCMP deaminase zinc-binding [Thermotoga lettingae TMO]
 gi|157314781|gb|ABV33880.1| CMP/dCMP deaminase zinc-binding [Thermotoga lettingae TMO]
          Length = 209

 Score =  101 bits (254), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 32/109 (29%), Positives = 48/109 (44%), Gaps = 13/109 (11%)

Query: 18  AALRNEIPVGAVAVLN-NKIISRAGNRNRELK--------DVTAHAEILAIRMGCRILSQ 68
           A     +P+G V V     IIS+  N   E          +  AHAE+ A+    RI   
Sbjct: 14  ALKMGSLPIGCVIVNGSGNIISKGRNAIHESNFSGYPVFGNSIAHAELNALVSMKRIPDN 73

Query: 69  EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFY 117
             + +  +Y ++EPC MC  AI ++ IR + YG  +    G+  G   Y
Sbjct: 74  MEISDYVIYTSMEPCVMCFGAIYMSGIRNVVYGMKD----GVGGGLNLY 118


>gi|15837552|ref|NP_298240.1| riboflavin-specific deaminase [Xylella fastidiosa 9a5c]
 gi|9105878|gb|AAF83760.1|AE003934_2 riboflavin-specific deaminase [Xylella fastidiosa 9a5c]
          Length = 364

 Score =  101 bits (254), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 35/150 (23%), Positives = 55/150 (36%), Gaps = 21/150 (14%)

Query: 3   KGNVFMSCALEEAQN-AALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
                M  AL  A+  A      P VG V V + +++    ++     D   HAE+ A+ 
Sbjct: 7   DDYRHMERALCLAERGAYTTRPNPMVGCVIVRDGEVVGEGWHQR--AGDP--HAEVFALC 62

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
                   +       YVTLEPC        CA A+  A +RR+     +P       G 
Sbjct: 63  AAG-----DRARGATAYVTLEPCAHLGRTPPCAMALIDAGVRRVVAAMVDPFPLVNGGGV 117

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
                A       +  G+ E ++R + + F
Sbjct: 118 TLLRAAG----VTVEHGLMEAQARALNRGF 143


>gi|78046354|ref|YP_362529.1| riboflavin biosynthesis protein RibD
           (diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-[5-phosphoribosylamino]uracil
           reductase) [Xanthomonas campestris pv. vesicatoria str.
           85-10]
 gi|78034784|emb|CAJ22429.1| riboflavin biosynthesis protein RibD
           (Diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-[5-phosphoribosylamino]uracil
           reductase) [Xanthomonas campestris pv. vesicatoria str.
           85-10]
          Length = 369

 Score =  101 bits (254), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 35/150 (23%), Positives = 56/150 (37%), Gaps = 21/150 (14%)

Query: 3   KGNVFMSCALEEAQN-AALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
             + +M+ AL  A+  A      P VG V V +   +    ++         HAE+ A+R
Sbjct: 11  DDHRWMAQALRLAERGAYTTRPNPMVGCVIVRDGVCVGEGFHQRAGG----PHAEVFALR 66

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
               +           YVTLEPC        CA A+  A + R+    ++P       G 
Sbjct: 67  AAGELA-----RGATAYVTLEPCAHYGRTPPCALALIDAGVARVVAAMADPFPQVNGGGF 121

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
                A      E+  G+   ++R + Q F
Sbjct: 122 ALLREAG----IEVLSGVMHAQARTLNQGF 147


>gi|325124197|gb|ADY83720.1| bifunctional protein ribD [Acinetobacter calcoaceticus PHEA-2]
          Length = 361

 Score =  101 bits (254), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 39/155 (25%), Positives = 64/155 (41%), Gaps = 21/155 (13%)

Query: 1   MKKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           +K+   +M  A+E A+         P VG V V ++++I +  +     K    HAE+ A
Sbjct: 4   LKQDQYWMQQAIELAKRGLYSTKPNPNVGCVIVKDDQLIGQGFH----PKAGQPHAEVFA 59

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
           +R        E       YVTLEPC        CA A+  A+++++     +P       
Sbjct: 60  LREAG-----EHAQGATAYVTLEPCAHYGRTPPCAEALVKAQVKKVVVACPDPNPLVAGK 114

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
           G Q       +   E+  GI E  + ++ Q F K 
Sbjct: 115 GVQILK----NAGIEVEVGICEDLASKLNQGFLKA 145


>gi|323491728|ref|ZP_08096906.1| riboflavin-specific deaminase [Vibrio brasiliensis LMG 20546]
 gi|323314090|gb|EGA67176.1| riboflavin-specific deaminase [Vibrio brasiliensis LMG 20546]
          Length = 368

 Score =  101 bits (254), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 36/154 (23%), Positives = 55/154 (35%), Gaps = 21/154 (13%)

Query: 2   KKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
            +    MS A+E A+         P VG V   + +I+    +          HAE+ A+
Sbjct: 6   SQDFKMMSRAIELAKGGIYTTAPNPNVGCVITRDGEIVGEGFHYRAGE----PHAEVHAL 61

Query: 60  RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113
           RM               YVTLEPC        CA  +  A++ ++     +P       G
Sbjct: 62  RMAGEKS-----VGATAYVTLEPCSHYGRTPPCAEGLIKAKVAKVICAMQDPNPQVAGRG 116

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
            Q    A      E+  G+ EQ +  +   F K 
Sbjct: 117 IQMLRDAG----IEVEVGLLEQDAINLNPAFIKR 146


>gi|65321502|ref|ZP_00394461.1| COG1985: Pyrimidine reductase, riboflavin biosynthesis [Bacillus
           anthracis str. A2012]
          Length = 370

 Score =  101 bits (254), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 34/158 (21%), Positives = 56/158 (35%), Gaps = 24/158 (15%)

Query: 3   KGNVFMSCALEEAQN--AALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
               +M  AL+ A+           VGAV V +  I+    +     +    HAE+ A+ 
Sbjct: 2   TDQEYMRIALQLAEGTCGQTSPNPMVGAVVVKDGNIVGMGAHLRAGEE----HAEVHALH 57

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           M              +YVTLEPC        C   +    ++R+     +       NG 
Sbjct: 58  MAGDKA-----KGATVYVTLEPCSHFGKTPPCCELLIKKEVKRVVIATLDCNPLVSGNGK 112

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF---KERR 149
           +    A      E+  G+ E  +  + + FF   K +R
Sbjct: 113 RKLEEAG----IEVTTGVLEAEAVLLNRYFFHYMKTKR 146


>gi|31335381|emb|CAD89884.1| riboflavin biosynthesis protein ribD [Bacillus cereus]
          Length = 209

 Score =  101 bits (254), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 35/158 (22%), Positives = 60/158 (37%), Gaps = 24/158 (15%)

Query: 3   KGNVFMSCALEEAQ-NAALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
               +M  AL+ A+  +   +  P VGAV V +  I+    +     +    HAE+ A+ 
Sbjct: 2   TDQXYMRIALQLAEGTSGQTSPNPMVGAVVVKDGNIVGMGAHLRAGEE----HAEVHALH 57

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           M              +YVTLEPC        C   +    ++R+     +       NG 
Sbjct: 58  MAGDKA-----KGATVYVTLEPCSHFGKTPPCCELLIKKEVKRVVIATLDCNPLVSGNGK 112

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF---KERR 149
           +    A      E+  G+ E+ +  + + FF   K +R
Sbjct: 113 KRLEEAG----IEVTTGVLEEEAVLLNRYFFHYMKTKR 146


>gi|298248927|ref|ZP_06972731.1| riboflavin biosynthesis protein RibD [Ktedonobacter racemifer DSM
           44963]
 gi|297546931|gb|EFH80798.1| riboflavin biosynthesis protein RibD [Ktedonobacter racemifer DSM
           44963]
          Length = 383

 Score =  101 bits (254), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 44/155 (28%), Positives = 61/155 (39%), Gaps = 30/155 (19%)

Query: 3   KGNVFMSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTA-----HAE 55
               FM  A+  A +        P VGAV V +N++I R           T+     HAE
Sbjct: 2   SDLEFMQQAIACAHSVEGHTSPRPAVGAVIVRDNRVIGRG---------ATSPPYGPHAE 52

Query: 56  ILAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGG 109
           I A+       +       DLY TLEPC        C  AI  A IRR+  GA +P    
Sbjct: 53  IHALNEAGATAA----SGADLYTTLEPCCIAIHTPPCTKAIIAAGIRRVIIGALDPNPRV 108

Query: 110 IENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
              G      A  +    +  GI++Q +  +I+ F
Sbjct: 109 SGRGVAQLREAGIN----VVTGIAQQETSALIRPF 139


>gi|301165384|emb|CBW24955.1| riboflavin biosynthesis protein [includes:
           diaminohydroxyphosphoribosylaminopyrimidine deaminase
           and 5-amino-6-(5-phosphoribosylamino)uracil reductase]
           [Bacteriovorax marinus SJ]
          Length = 378

 Score =  101 bits (254), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 37/155 (23%), Positives = 60/155 (38%), Gaps = 22/155 (14%)

Query: 1   MKKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           +K    ++      A+ A  + +  P VG+V V +N II    ++         HAE  A
Sbjct: 3   IKIDEQYIRRCFALAKKATGMTSPNPLVGSVIVQDNIIIGEGYHQRYGE----PHAEPNA 58

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC-------TMCAAAISLARIRRLYYGASNPKGGGIE 111
           I         E +    LY  LEPC         C   I  ++I+R+     +P      
Sbjct: 59  INNAV-----EPVEGATLYCNLEPCCHTNKQTPPCVNKIIESKIKRVVISNLDPNPYVAG 113

Query: 112 NGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
           NG +    A       +  G+ E+  R++ + FFK
Sbjct: 114 NGVKKLREAG----IAVSVGVLEEEGRELNEVFFK 144


>gi|145634121|ref|ZP_01789832.1| riboflavin biosynthesis protein RibD [Haemophilus influenzae
           PittAA]
 gi|145268565|gb|EDK08558.1| riboflavin biosynthesis protein RibD [Haemophilus influenzae
           PittAA]
          Length = 372

 Score =  101 bits (254), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 35/156 (22%), Positives = 57/156 (36%), Gaps = 21/156 (13%)

Query: 2   KKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
            + +VFM  AL+ A          P VG V V N +I+    +   +      HAE +A+
Sbjct: 6   SQDHVFMQRALDLATKGQYTTTPNPSVGCVLVKNGEIVGEGFH--FKAGQP--HAERVAL 61

Query: 60  RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113
                    E       YVTLEPC        CA  +  A + ++     +P       G
Sbjct: 62  AQAG-----ENAKGTTAYVTLEPCSHYGRTPPCALGLIEAGVVKVIAAMQDPNPQVAGKG 116

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +  + A    +      +   ++ +I + F K  R
Sbjct: 117 LKMLSDAGIESAVN----LLSDQAEKINKGFLKRMR 148


>gi|281347275|gb|EFB22859.1| hypothetical protein PANDA_015525 [Ailuropoda melanoleuca]
          Length = 353

 Score =  101 bits (254), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 38/177 (21%), Positives = 67/177 (37%), Gaps = 46/177 (25%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLN--NKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M  A+  AQ AA R    VGAV V     ++++              HA ++ I +  + 
Sbjct: 177 MERAVWAAQQAAARGLRAVGAVVVDPSSGRVLATGH-DCSSTASPLLHATMVCIDLVAQG 235

Query: 66  LSQ------------------------------------------EILPEVDLYVTLEPC 83
             +                                           +    DLYVT EPC
Sbjct: 236 QGRGAYDLGPYPACSFAPAVAPQGIRVGSVRKLEEDGDVHVDGLPYVCTGYDLYVTHEPC 295

Query: 84  TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140
            MCA A+  +R++R++YGA +P  G +    + +     +H  +++ G+ E + R++
Sbjct: 296 AMCAMALVHSRVQRVFYGAPSPD-GALGTRFRIHARPDLNHRFQVFRGVLEAQCRRL 351


>gi|156977316|ref|YP_001448222.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Vibrio
           harveyi ATCC BAA-1116]
 gi|156528910|gb|ABU73995.1| hypothetical protein VIBHAR_06102 [Vibrio harveyi ATCC BAA-1116]
          Length = 201

 Score =  101 bits (254), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 35/146 (23%), Positives = 56/146 (38%), Gaps = 21/146 (14%)

Query: 5   NVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
             FM  ALE + NA  A +   PVG V V + +I+S    +         HAE+ A++  
Sbjct: 63  QQFMLRALEVSLNALPACQPNPPVGCVLVKDGEIVSEGHTQAIGGN----HAEVEALKA- 117

Query: 63  CRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116
                +  L +V  YVTLEPC        CA  +    I+++     +P       G   
Sbjct: 118 ----YKGDLSDVTAYVTLEPCSFVGRTPACAKTLVTCGIKKVVVAMLDPDPRNAGRGIDI 173

Query: 117 YTLATCHHSPEIYPGISEQRSRQIIQ 142
                     E+  G+  + +   + 
Sbjct: 174 LKEGG----VEVEIGLCGEEASAFLS 195


>gi|300789562|ref|YP_003769853.1| cytidine/deoxycytidine deaminase [Amycolatopsis mediterranei U32]
 gi|299799076|gb|ADJ49451.1| cytidine/deoxycytidine deaminase [Amycolatopsis mediterranei U32]
          Length = 141

 Score =  101 bits (254), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 28/110 (25%), Positives = 48/110 (43%), Gaps = 3/110 (2%)

Query: 1   MKK-GNVFMSCALEEAQNAALR-NEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEIL 57
           MK      +  A+E A+ A       P G++    + KI++   N +    D+TAH E+ 
Sbjct: 1   MKDTEETLLRRAIELAREAREEHGNPPFGSLLADADGKILAEDRNTSLTDNDITAHPELK 60

Query: 58  AIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKG 107
             R   + L  E      ++ + +PC MC  AI  + + R+ Y  S  + 
Sbjct: 61  LARWAAQNLDPETAAATTMFTSTQPCGMCTGAIERSGLGRVVYALSTEQF 110


>gi|260556402|ref|ZP_05828621.1| riboflavin biosynthesis protein RibD [Acinetobacter baumannii ATCC
           19606]
 gi|260410457|gb|EEX03756.1| riboflavin biosynthesis protein RibD [Acinetobacter baumannii ATCC
           19606]
          Length = 361

 Score =  101 bits (254), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 38/155 (24%), Positives = 62/155 (40%), Gaps = 21/155 (13%)

Query: 1   MKKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           +K+   +M  A+E A+         P VG V V ++++I    +     K    HAE+ A
Sbjct: 4   LKQDQYWMQQAIELAKRGLYSTKPNPNVGCVIVKDDQLIGEGFH----PKAGQPHAEVFA 59

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
           +R                YVTLEPC        CA A+  A+++++     +P       
Sbjct: 60  LRQAGEQAQ-----GATAYVTLEPCAHYGRTPPCAEALVKAQVKKVVVACPDPNPLVAGK 114

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
           G Q       +   E+  GI E  + ++ Q F K 
Sbjct: 115 GVQILK----NAGIEVEIGICEDLAAKLNQGFLKA 145


>gi|269961115|ref|ZP_06175483.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
 gi|269834066|gb|EEZ88157.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
          Length = 159

 Score =  101 bits (254), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 35/146 (23%), Positives = 55/146 (37%), Gaps = 21/146 (14%)

Query: 5   NVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
             FM  ALE ++NA  A +   PVG V V + +I+S    +         HAE+ A++  
Sbjct: 21  QQFMLRALEVSRNALPACQPNPPVGCVLVKDGEIVSEGHTQAIGGN----HAEVEALKA- 75

Query: 63  CRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116
                   L +V  YVTLEPC        CA  +    I+++     +P       G   
Sbjct: 76  ----YNGDLSDVTAYVTLEPCSFVGRTPACAKTLVTCGIKKVVVAMLDPDPRNAGRGIDI 131

Query: 117 YTLATCHHSPEIYPGISEQRSRQIIQ 142
                     E+  G+  +     + 
Sbjct: 132 LKEGG----VEVEIGLCGEEVSAFLT 153


>gi|254498334|ref|ZP_05111073.1| cytidine and deoxycytidylate deaminase family protein [Legionella
           drancourtii LLAP12]
 gi|254352442|gb|EET11238.1| cytidine and deoxycytidylate deaminase family protein [Legionella
           drancourtii LLAP12]
          Length = 175

 Score =  101 bits (254), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 29/104 (27%), Positives = 50/104 (48%), Gaps = 7/104 (6%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLN--NKIISRAGNRNRELKDVTAHAEILAI 59
           K    +M  A++ A++       P  A+ V N   +I+S+  N      + T H E++AI
Sbjct: 31  KSDEYYMQIAIDLAKSNPKA---PFAALIVDNKTGEILSKGINA--SKVNPTFHGEMVAI 85

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
               +   +    +V LY T EPC+MC +A+   +I R+ +  S
Sbjct: 86  NNCVKEHPKVDWSQVTLYTTAEPCSMCQSAVVWTKISRVVFATS 129


>gi|325928452|ref|ZP_08189643.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Xanthomonas
           perforans 91-118]
 gi|325541169|gb|EGD12720.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Xanthomonas
           perforans 91-118]
          Length = 369

 Score =  101 bits (254), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 35/150 (23%), Positives = 56/150 (37%), Gaps = 21/150 (14%)

Query: 3   KGNVFMSCALEEAQN-AALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
             + +M+ AL  A+  A      P VG V V +   +    ++         HAE+ A+R
Sbjct: 11  DDHRWMAQALRLAERGAYTTRPNPMVGCVIVRDGVCVGEGFHQRAGG----PHAEVFALR 66

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
               +           YVTLEPC        CA A+  A + R+    ++P       G 
Sbjct: 67  AAGELA-----RGATAYVTLEPCAHYGRTPPCALALIDAGVARVVAAMADPFPQVNGGGF 121

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
                A      E+  G+   ++R + Q F
Sbjct: 122 ALLREAG----IEVLSGVMHAQARTLNQGF 147


>gi|301781056|ref|XP_002925950.1| PREDICTED: LOW QUALITY PROTEIN: tRNA-specific adenosine
           deaminase-like protein 3-like [Ailuropoda melanoleuca]
          Length = 371

 Score =  101 bits (254), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 38/177 (21%), Positives = 67/177 (37%), Gaps = 46/177 (25%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLN--NKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M  A+  AQ AA R    VGAV V     ++++              HA ++ I +  + 
Sbjct: 193 MERAVWAAQQAAARGLRAVGAVVVDPSSGRVLATGH-DCSSTASPLLHATMVCIDLVAQG 251

Query: 66  LSQ------------------------------------------EILPEVDLYVTLEPC 83
             +                                           +    DLYVT EPC
Sbjct: 252 QGRGAYDLGPYPACSFAPAVAPQGIRVGSVRKLEEDGDVHVDGLPYVCTGYDLYVTHEPC 311

Query: 84  TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140
            MCA A+  +R++R++YGA +P  G +    + +     +H  +++ G+ E + R++
Sbjct: 312 AMCAMALVHSRVQRVFYGAPSPD-GALGTRFRIHARPDLNHRFQVFRGVLEAQCRRL 367


>gi|284045160|ref|YP_003395500.1| riboflavin biosynthesis protein RibD [Conexibacter woesei DSM
           14684]
 gi|283949381|gb|ADB52125.1| riboflavin biosynthesis protein RibD [Conexibacter woesei DSM
           14684]
          Length = 374

 Score =  101 bits (254), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 40/158 (25%), Positives = 59/158 (37%), Gaps = 22/158 (13%)

Query: 2   KKGNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57
               + ++ ALE A  A  R  +   P VGAV   + ++++   +          HAE+ 
Sbjct: 7   DTDRLHLARALELA--AQGRGRVSPNPMVGAVITRDGEVVAEGWHSEYGA----PHAEVE 60

Query: 58  AIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIE 111
           AI           L    LYV+LEPC        C  AI  A IRR+   + +P      
Sbjct: 61  AIAAAGDA----DLSGATLYVSLEPCCHTGKQPPCTDAILAAGIRRVVVASDDPTEKASG 116

Query: 112 NGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
            G              +  G    R+R + Q F K+ R
Sbjct: 117 RGLGILRDEGVD--VAVAGGELAARARLLNQPFRKQAR 152


>gi|110598480|ref|ZP_01386751.1| riboflavin biosynthesis protein RibD:Riboflavin-specific
           deaminase-like [Chlorobium ferrooxidans DSM 13031]
 gi|110339930|gb|EAT58434.1| riboflavin biosynthesis protein RibD:Riboflavin-specific
           deaminase-like [Chlorobium ferrooxidans DSM 13031]
          Length = 369

 Score =  101 bits (254), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 37/154 (24%), Positives = 55/154 (35%), Gaps = 23/154 (14%)

Query: 3   KGNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
              V+M+  +E A        +   P VG+V V +  II    +          HAE+ A
Sbjct: 7   DDTVYMNRCIELALKGG--GTVSPNPMVGSVIVCDGVIIGEGFHERYGA----PHAEVNA 60

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
           I     +  QE+L    LYV LEPC        C+  I    I R+  G  +P       
Sbjct: 61  I---ASVADQELLRRSTLYVNLEPCSHFGKTPPCSDLIIEKGIPRVVVGCRDPFVSVAGK 117

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
           G              +  G+ E    ++ + F K
Sbjct: 118 GI----AKLLGAGIAVTEGVLEAACVKLNEAFIK 147


>gi|239624449|ref|ZP_04667480.1| cytidine/deoxycytidylate deaminase family protein [Clostridiales
           bacterium 1_7_47_FAA]
 gi|239520835|gb|EEQ60701.1| cytidine/deoxycytidylate deaminase family protein [Clostridiales
           bacterium 1_7_47FAA]
          Length = 165

 Score =  101 bits (254), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 32/99 (32%), Positives = 41/99 (41%), Gaps = 2/99 (2%)

Query: 9   SCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
            CA E ++ +      P GA+       I+    N        T HAE        +  S
Sbjct: 16  RCA-EISRESRAGGNTPFGALLADKEGNILLEQPNVEITENKCTGHAETQVAEKASQQYS 74

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPK 106
           +E L +  LY T EPC MCA AI  A I R+ YG S   
Sbjct: 75  KEFLKDCTLYTTAEPCAMCAGAIYWAGIGRVVYGMSEKD 113


>gi|325288196|ref|YP_004263986.1| riboflavin biosynthesis protein RibD [Cellulophaga lytica DSM 7489]
 gi|324323650|gb|ADY31115.1| riboflavin biosynthesis protein RibD [Cellulophaga lytica DSM 7489]
          Length = 350

 Score =  101 bits (254), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 43/161 (26%), Positives = 67/161 (41%), Gaps = 24/161 (14%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57
           MK    ++   ++ A+N       P   VGA+ V NN II              +HAE+ 
Sbjct: 1   MKIHEKYILRCIQIAKNGLGST-FPNPMVGALIVHNNAIIGEGFTSPYGG----SHAEVN 55

Query: 58  AIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIE 111
           AI     I  + +L E  +YVTLEPC        CA  I   +I  +  G  +P      
Sbjct: 56  AINS---IKDKSVLKESTIYVTLEPCSHYGKTPPCADLIIKHKIPNIVIGLKDPHEKVAG 112

Query: 112 NGTQFYTLATCHHSPEIYPGISEQRSRQIIQD---FFKERR 149
           NG +    A C+    +  G+ E+  R+       F++++R
Sbjct: 113 NGIKKLRAAGCN----VTIGVLEEECREHHNRFLCFYEKKR 149


>gi|319778563|ref|YP_004129476.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase [Taylorella
           equigenitalis MCE9]
 gi|317108587|gb|ADU91333.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase [Taylorella
           equigenitalis MCE9]
          Length = 379

 Score =  101 bits (254), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 35/148 (23%), Positives = 58/148 (39%), Gaps = 16/148 (10%)

Query: 8   MSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M  A E +     L +  P VG V V N++II     +         HAEI+A++     
Sbjct: 1   MRLAYEASLKTRFLPDPNPCVGCVIVHNDEIIGEGATQIAGSH----HAEIMALKDARMR 56

Query: 66  LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
             ++++ +  LYVTLEPC        C  A+    I+ +   + +P      NG +    
Sbjct: 57  GHEDLIADAILYVTLEPCSHFGRTPPCTDALISNGIKHVVIASPDPNPIVGGNGIRILRS 116

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKE 147
                  E+  G   +   ++   FF  
Sbjct: 117 NGI--KVEV--GFMLEEVLELNLGFFSR 140


>gi|219682366|ref|YP_002468750.1| riboflavin deaminase [Buchnera aphidicola str. Tuc7 (Acyrthosiphon
           pisum)]
 gi|219622099|gb|ACL30255.1| riboflavin deaminase [Buchnera aphidicola str. Tuc7 (Acyrthosiphon
           pisum)]
 gi|311086187|gb|ADP66269.1| riboflavin deaminase [Buchnera aphidicola str. LL01 (Acyrthosiphon
           pisum)]
 gi|311086763|gb|ADP66844.1| riboflavin deaminase [Buchnera aphidicola str. TLW03 (Acyrthosiphon
           pisum)]
 gi|311087351|gb|ADP67431.1| riboflavin deaminase [Buchnera aphidicola str. JF99 (Acyrthosiphon
           pisum)]
 gi|311087851|gb|ADP67930.1| riboflavin deaminase [Buchnera aphidicola str. JF98 (Acyrthosiphon
           pisum)]
          Length = 141

 Score =  101 bits (254), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 39/152 (25%), Positives = 56/152 (36%), Gaps = 29/152 (19%)

Query: 8   MSCALEEAQNAALRNEI-----P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           M  A+E ++      E      P VG V V NN I+    ++         HAEI A+ M
Sbjct: 1   MKRAIELSKL----GEFTTAPNPNVGCVIVKNNIIVGEGWHKQAGKN----HAEINALIM 52

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
                          YVTLEPC        C  A+  + I R+     +P      NG  
Sbjct: 53  AGEKAQ-----GGTAYVTLEPCNHFGKTPPCCNALIKSGINRVVISNIDPNPKISGNGIL 107

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
           +       H   +  G+  + S+Q  + FFK 
Sbjct: 108 YLKK----HGICVKTGLLSKESKQYNKGFFKR 135


>gi|134102530|ref|YP_001108191.1| guanine deaminase [Saccharopolyspora erythraea NRRL 2338]
 gi|291007103|ref|ZP_06565076.1| guanine deaminase [Saccharopolyspora erythraea NRRL 2338]
 gi|133915153|emb|CAM05266.1| guanine deaminase [Saccharopolyspora erythraea NRRL 2338]
          Length = 188

 Score =  101 bits (254), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 33/152 (21%), Positives = 54/152 (35%), Gaps = 33/152 (21%)

Query: 3   KGNVFMSCALEEAQNAALRN-EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
               FM+ A+  A  + +     P GAV     +I++R  NR     D TAH E+ AIR 
Sbjct: 2   NDEEFMAEAVRLATESVVNGWGGPFGAVITDGERIVARGQNRVLLTGDPTAHGEVEAIRK 61

Query: 62  GCRILSQE--------------------------------ILPEVDLYVTLEPCTMCAAA 89
             ++L+ +                                +L    +Y +  PC MC +A
Sbjct: 62  AVQVLNPDAPSIAEERQNGSTLALVPRPEGSSDPMPARARMLKGHSIYTSGAPCPMCMSA 121

Query: 90  ISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
           I  +R+  ++Y +       I     F     
Sbjct: 122 IYWSRLDAVHYSSDLESTRAIGFDDAFQYEDR 153


>gi|81299014|ref|YP_399222.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase /
           diaminohydroxyphosphoribosylaminopyrimidine deaminase
           [Synechococcus elongatus PCC 7942]
 gi|81167895|gb|ABB56235.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase /
           diaminohydroxyphosphoribosylaminopyrimidine deaminase
           [Synechococcus elongatus PCC 7942]
          Length = 368

 Score =  101 bits (253), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 34/151 (22%), Positives = 55/151 (36%), Gaps = 21/151 (13%)

Query: 2   KKGNVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
            +   +M   LE A  AA +      VG + V   +I+    +          HAE+ A+
Sbjct: 3   DRDRQYMQRCLELAAQAAGQTAPNPMVGCIIVQGEEIVGEGFH--PAAGQP--HAEVFAL 58

Query: 60  RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113
           R        +      LYV LEPC        C+ A+  A ++R+  G  +P       G
Sbjct: 59  RQAG-----DRARGATLYVNLEPCNHYGRTPPCSEAVVAAGLKRVVVGMVDPDPRVAGGG 113

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
                 A      E+  G+ +    Q+ + F
Sbjct: 114 IARLQQAG----IEVTVGVEQAACEQMNEAF 140


>gi|261253738|ref|ZP_05946311.1| diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Vibrio orientalis CIP 102891]
 gi|260937129|gb|EEX93118.1| diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Vibrio orientalis CIP 102891]
          Length = 368

 Score =  101 bits (253), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 36/153 (23%), Positives = 58/153 (37%), Gaps = 21/153 (13%)

Query: 3   KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +    MS A+E A+         P VG V V  ++I+    +          HAE+ A+R
Sbjct: 7   QDFTMMSRAIELAKGGIYTTAPNPNVGCVIVQGDEIVGEGFHYRAGE----PHAEVHALR 62

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           M       +       YVTLEPC        CA  +  A++ ++     +P       G 
Sbjct: 63  MAG-----DRAVGATAYVTLEPCSHYGRTPPCAEGLIKAKVAKVICAMEDPNPKVAGRGI 117

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
           Q    A       +  G+ EQ++  +   F K+
Sbjct: 118 QMLRDAG----ITVEVGLLEQQAESLNPAFIKQ 146


>gi|145630038|ref|ZP_01785820.1| riboflavin biosynthesis protein RibD [Haemophilus influenzae R3021]
 gi|144984319|gb|EDJ91742.1| riboflavin biosynthesis protein RibD [Haemophilus influenzae R3021]
          Length = 372

 Score =  101 bits (253), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 35/156 (22%), Positives = 57/156 (36%), Gaps = 21/156 (13%)

Query: 2   KKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
            + +VFM  AL+ A          P VG V V N +I+    +   +      HAE +A+
Sbjct: 6   SQDHVFMQRALDLAAKGQYTTTPNPSVGCVLVKNGEIVGEGFH--FKAGQP--HAERIAL 61

Query: 60  RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113
                    E       YVTLEPC        CA  +  A + ++     +P       G
Sbjct: 62  AQAG-----ENAKGTTAYVTLEPCSHYGRTPPCALGLIEAGVVKVIAAMQDPNPQVAGKG 116

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +  + A    +      +   ++ +I + F K  R
Sbjct: 117 LKMLSDAGIESAVN----LLNDQAEKINKGFLKRMR 148


>gi|3378525|emb|CAA08869.1| riboflavin-specific deaminase [Thermotoga neapolitana]
          Length = 241

 Score =  101 bits (253), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 35/110 (31%), Positives = 46/110 (41%), Gaps = 13/110 (11%)

Query: 5   NVFMSCALEEAQNAALR--NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
             FM  A+E A+    R     PVGAV V   +IIS   +    +     HAE +AI   
Sbjct: 3   ERFMKRAIELAKKGLGRVNPNPPVGAVVVKEGRIISEGFHPLFLVG---PHAERVAIESA 59

Query: 63  CRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPK 106
            R    E L    L VTLEPC        C   I  + I+++  G  +P 
Sbjct: 60  KRK--GEDLTGTTLVVTLEPCDHHGKTPPCTDLIIESGIKKVVIGMRDPN 107


>gi|5262786|emb|CAB45891.1| putative protein [Arabidopsis thaliana]
 gi|7268893|emb|CAB79096.1| putative protein [Arabidopsis thaliana]
 gi|45268463|gb|AAS55854.1| pyrimidine deaminase [synthetic construct]
          Length = 363

 Score =  101 bits (253), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 33/150 (22%), Positives = 60/150 (40%), Gaps = 21/150 (14%)

Query: 3   KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
             + +M   +E A+ A    +  P VG V V +  I+ +  +     K    HAE+ A+R
Sbjct: 10  DDSFYMRKCVELAKRAIGCTSPNPMVGCVIVKDGDIVGQGFH----PKAGQPHAEVFALR 65

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
               +           YV+LEPC        C  A+  A++RR+  G  +P      +G 
Sbjct: 66  DAGELAEN-----ATAYVSLEPCNHYGRTPPCTEALIKAKVRRVVIGMVDPNPIVFSSGI 120

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
                A      ++   + E+  +++ + F
Sbjct: 121 SRLKDAG----IDVTVSVEEELCKKMNEGF 146


>gi|15617059|ref|NP_240272.1| riboflavin deaminase [Buchnera aphidicola str. APS (Acyrthosiphon
           pisum)]
 gi|219681811|ref|YP_002468197.1| riboflavin deaminase [Buchnera aphidicola str. 5A (Acyrthosiphon
           pisum)]
 gi|257471513|ref|ZP_05635512.1| riboflavin deaminase [Buchnera aphidicola str. LSR1 (Acyrthosiphon
           pisum)]
 gi|25403627|pir||F84983 diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26)
           [imported] - Buchnera sp. (strain APS)
 gi|10039124|dbj|BAB13158.1| riboflavin deaminase [Buchnera aphidicola str. APS (Acyrthosiphon
           pisum)]
 gi|219624654|gb|ACL30809.1| riboflavin deaminase [Buchnera aphidicola str. 5A (Acyrthosiphon
           pisum)]
          Length = 141

 Score =  101 bits (253), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 39/152 (25%), Positives = 55/152 (36%), Gaps = 29/152 (19%)

Query: 8   MSCALEEAQNAALRNEI-----P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           M  A+E ++      E      P VG V V NN I+    +          HAEI A+ M
Sbjct: 1   MKRAIELSKL----GEFTTAPNPNVGCVIVKNNIIVGEGWHEQAGKN----HAEINALIM 52

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
                          YVTLEPC        C  A+  + I R+     +P      NG  
Sbjct: 53  AGEKAQ-----GGTAYVTLEPCNHFGKTPPCCNALIKSGINRVVISNIDPNPKISGNGIL 107

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
           +       H   +  G+  + S+Q  + FFK 
Sbjct: 108 YLKK----HGICVKTGLLSKESKQYNKGFFKR 135


>gi|295696432|ref|YP_003589670.1| riboflavin biosynthesis protein RibD [Bacillus tusciae DSM 2912]
 gi|295412034|gb|ADG06526.1| riboflavin biosynthesis protein RibD [Bacillus tusciae DSM 2912]
          Length = 371

 Score =  101 bits (253), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 35/155 (22%), Positives = 62/155 (40%), Gaps = 25/155 (16%)

Query: 3   KGNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
               +M  AL+ A  A+ R +    P VGAV V + +++ +  +          HAE+ A
Sbjct: 2   TDEDWMRWALQLA--ASARGQTSPNPMVGAVIVKDGELVGQGAHLKAGG----PHAEVHA 55

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
           +RM              +YVTLEPC        C+ A+    + R+     +P       
Sbjct: 56  LRMAGEKA-----RGATVYVTLEPCDHHGRTPPCSRALIEHGVARVVVAMVDPNPLVAGG 110

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
           G +    A      ++  G+ E+ +R + + F + 
Sbjct: 111 GIRRLRQAG----VKVEVGLLEKDARALNRGFIQR 141


>gi|238927494|ref|ZP_04659254.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Selenomonas
           flueggei ATCC 43531]
 gi|238884776|gb|EEQ48414.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Selenomonas
           flueggei ATCC 43531]
          Length = 386

 Score =  101 bits (253), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 40/151 (26%), Positives = 57/151 (37%), Gaps = 21/151 (13%)

Query: 2   KKGNVFMSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
           +    +M  AL  A+ A  R    P VGA+ V +  + +   +R         HAEI A+
Sbjct: 22  ETDESYMREALHLAEFARGRTSPNPLVGALIVRDGIVAASGWHRAAGE----PHAEIHAL 77

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENG 113
           RM   +          LYVTLEPC        CA A+  A I R+     +P       G
Sbjct: 78  RMAGELA-----RGATLYVTLEPCAHQGRTGPCAKAVIAAGITRVVVALRDPNPLVAGRG 132

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
                 A      E+  G+    +R+    F
Sbjct: 133 IAMLEAAG----IEVVTGVCAAEARRQNAAF 159


>gi|309780821|ref|ZP_07675562.1| riboflavin biosynthesis protein RibD [Ralstonia sp. 5_7_47FAA]
 gi|308920503|gb|EFP66159.1| riboflavin biosynthesis protein RibD [Ralstonia sp. 5_7_47FAA]
          Length = 370

 Score =  101 bits (253), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 36/150 (24%), Positives = 55/150 (36%), Gaps = 20/150 (13%)

Query: 4   GNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
            +  M  AL  A+        P   VG V V ++ +I     +         HAEI AI+
Sbjct: 6   DHAMMQRALALAEKGLFTT-TPNPRVGCVIVRDDTVIGEGYTQPAGQD----HAEIQAIK 60

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
                   + +     YVTLEPC        CA  +  A I R+     +P       G 
Sbjct: 61  DA--QSRGQDVRGATAYVTLEPCSHFGRTPPCADRLVEAGIARVVAAMEDPNPAVSGRGL 118

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
           Q    A      ++  G+ E+ +R++   F
Sbjct: 119 QKLRDAG----VDVRCGLLEREARELNIGF 144


>gi|271969361|ref|YP_003343557.1| guanine deaminase [Streptosporangium roseum DSM 43021]
 gi|270512536|gb|ACZ90814.1| guanine deaminase [Streptosporangium roseum DSM 43021]
          Length = 157

 Score =  101 bits (253), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 26/91 (28%), Positives = 39/91 (42%), Gaps = 3/91 (3%)

Query: 11  ALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQE 69
           AL  A+       IP   + V     ++    NR R  +D TAHAEI+A+R   R     
Sbjct: 19  ALATAE--VHAGGIPFAGLVVDGTGTVLGSGVNRVRAHRDPTAHAEIVALREAAREHGPH 76

Query: 70  ILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
            L    L  + EPC +C      + + R+ +
Sbjct: 77  ALAGTTLLASGEPCPLCYVTALWSGVSRIVF 107


>gi|93007294|ref|YP_581731.1| riboflavin biosynthesis protein RibD [Psychrobacter cryohalolentis
           K5]
 gi|92394972|gb|ABE76247.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Psychrobacter cryohalolentis K5]
          Length = 370

 Score =  101 bits (253), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 34/155 (21%), Positives = 59/155 (38%), Gaps = 21/155 (13%)

Query: 3   KGNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           K + FM  A+E+A+      R    VG V V   +++ +  +     K    HAE+ A++
Sbjct: 30  KDHYFMMLAIEQAKLGLYTARPNPAVGCVIVQAEEVVGQGFH----PKAGQPHAEVFALK 85

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
                           YVTLEPC        CA A+  + + R+     +P       G 
Sbjct: 86  DAG-----IRTVGATAYVTLEPCSHTGRTPPCAKALIESGVIRVVVAGLDPNPQVAGRGV 140

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
           +    A       +  G+ + ++  + + F K  R
Sbjct: 141 KLLEQAG----IAVSVGVLKTQAEALNKGFLKAMR 171


>gi|94500359|ref|ZP_01306891.1| riboflavin-specific deaminase/reductase [Oceanobacter sp. RED65]
 gi|94427394|gb|EAT12372.1| riboflavin-specific deaminase/reductase [Oceanobacter sp. RED65]
          Length = 370

 Score =  101 bits (253), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 37/155 (23%), Positives = 55/155 (35%), Gaps = 21/155 (13%)

Query: 1   MKKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           M     FM+ A++ A+      +  P VG V V    II    +          HAE+ A
Sbjct: 1   MPSHIDFMARAIQLAKQGLYSTDPNPRVGCVLVKEGNIIGEGYHVRAGEG----HAEVNA 56

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
           +       +         YVTLEPC        C+  +  A IR L     +P       
Sbjct: 57  L-----AQAGSAAQGATAYVTLEPCSHFGRTPPCSDTLIKAGIRTLVCAMQDPNPEVSGR 111

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
           G +    A      EI  G+ E  ++++   F K 
Sbjct: 112 GFEKMRAAG----IEIISGVLESEAKKLNPGFIKR 142


>gi|316978726|gb|EFV61670.1| serine/threonine-protein phosphatase PP1 [Trichinella spiralis]
          Length = 537

 Score =  101 bits (253), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 35/159 (22%), Positives = 63/159 (39%), Gaps = 32/159 (20%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
           + +M   ++ A+    + ++ VG   V      +IS A N +   ++   HA + AI + 
Sbjct: 142 DRYMRMCIDSAKKV--KGQVGVGCAIVEPKTGTVISVA-NNSLASENPIQHAVMCAIDLV 198

Query: 63  CRILSQEILP--------------------------EVDLYVTLEPCTMCAAAISLARIR 96
                 + L                             D YVT EPC MC+ A+  +RIR
Sbjct: 199 AEFQGGKPLSRQCSGVLHAEKDQLSPDSGSCFYLCTGFDCYVTREPCAMCSMALLHSRIR 258

Query: 97  RLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQ 135
           R++YG      G + +    + L + +H  +++  I E 
Sbjct: 259 RVFYGYP-VNHGALGSAAMIHMLKSSNHRFDVFKEILED 296


>gi|311896167|dbj|BAJ28575.1| putative deaminase [Kitasatospora setae KM-6054]
          Length = 146

 Score =  101 bits (253), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 27/101 (26%), Positives = 46/101 (45%), Gaps = 1/101 (0%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
               +  A+E A  A    + P G++    +  +++ A N  R  +D+TAH E+   R  
Sbjct: 6   DEALLRRAVELAARAVESGDAPYGSLLAGADGAVLAEAHNTVRRERDITAHPELKLARWA 65

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
            R L         LY + +PC MCA A+  + + R+ +  S
Sbjct: 66  ARELEPAEAARTTLYTSCQPCGMCAGALVRSGLGRVVFALS 106


>gi|319785885|ref|YP_004145360.1| cytosine deaminase [Pseudoxanthomonas suwonensis 11-1]
 gi|317464397|gb|ADV26129.1| Cytosine deaminase [Pseudoxanthomonas suwonensis 11-1]
          Length = 158

 Score =  101 bits (253), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 29/146 (19%), Positives = 53/146 (36%), Gaps = 13/146 (8%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRM 61
                ++ A+EEA+       IP+GA     +  ++ R  NR  +  D + H E  A R 
Sbjct: 6   DHRAMLAIAVEEARQGLAEGGIPIGAALFAADGTLLGRGHNRRVQENDPSVHGETDAFRK 65

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
             R  S     +  +  TL PC  C+  +    I  +  G +    GG      +     
Sbjct: 66  AGRQRS---YRDTIMVTTLSPCWYCSGLVRQFGIGTVVMGEAVNFQGG----HDWLREQG 118

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFKE 147
                E+   + +    +++ D+   
Sbjct: 119 ----VEVVD-LDDDECIRMLGDWIAA 139


>gi|262340928|ref|YP_003283783.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Blattabacterium sp. (Blattella germanica)
           str. Bge]
 gi|262272265|gb|ACY40173.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Blattabacterium sp. (Blattella germanica)
           str. Bge]
          Length = 343

 Score =  101 bits (253), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 43/153 (28%), Positives = 62/153 (40%), Gaps = 19/153 (12%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           MK    FMS A++ A+N        P VG V   N  IIS   +  + +     HAE +A
Sbjct: 1   MKDKETFMSRAIQLAKNGLGMTSPNPMVGCVIERNGFIISEGWHYKKGMD----HAEAIA 56

Query: 59  IRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIEN 112
           I    RI ++ +  +  LYVTLEPC        C   I    I R+  G  +P       
Sbjct: 57  IN---RIKNKSLFLDSTLYVTLEPCVHFGETSPCVDLIIKNHIPRIVVGIQDPHDKVKGL 113

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
           G Q           E+   + + + R + + FF
Sbjct: 114 GIQKLKEYG----IEVIENVLKNKCRFLNKRFF 142


>gi|163961159|gb|ABY50083.1| cytosine deaminase [Candida tropicalis]
          Length = 120

 Score =  101 bits (253), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 27/120 (22%), Positives = 50/120 (41%), Gaps = 10/120 (8%)

Query: 29  VAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAA 88
           +   + K++ +  N   +      H E+ A+    R+  +    +  +Y TL PC MC  
Sbjct: 1   IISSDGKVLGKGHNERIQKGSAILHGEMSALEDAGRLPGKAY-KDCTIYTTLSPCNMCTG 59

Query: 89  AISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKER 148
           AI L  I+R+  G  N    G E+  +   +   +        + +   ++I+  F KER
Sbjct: 60  AILLYGIKRVVMG-ENVNFQGAEDLLRANGVEVIN--------LDDNDCKEIMSKFIKER 110


>gi|152966031|ref|YP_001361815.1| cytosine deaminase [Kineococcus radiotolerans SRS30216]
 gi|151360548|gb|ABS03551.1| Cytosine deaminase [Kineococcus radiotolerans SRS30216]
          Length = 165

 Score =  101 bits (253), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 34/142 (23%), Positives = 55/142 (38%), Gaps = 13/142 (9%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +  ALE+A+  A    +P+GA    L+  ++    NR  +  D + H E  A R   R  
Sbjct: 23  LDVALEQARAGAAEGGVPIGAALFTLDGTLLGAGRNRRVQDDDPSVHGETDAFRNAGRRA 82

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
           S        +  TL PC  C+  +    I  L  G S    GG     +        H  
Sbjct: 83  S---YRHTVMVTTLSPCWYCSGLVRQFGIGHLLVGESTTFTGGHAWLAE--------HGV 131

Query: 127 EIYPGISEQRSRQIIQDFFKER 148
            +   + + R R ++  F ++R
Sbjct: 132 SVTV-LDDDRCRALMTTFIEQR 152


>gi|153833299|ref|ZP_01985966.1| riboflavin biosynthesis protein RibD [Vibrio harveyi HY01]
 gi|148870435|gb|EDL69356.1| riboflavin biosynthesis protein RibD [Vibrio harveyi HY01]
          Length = 159

 Score =  101 bits (253), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 35/146 (23%), Positives = 55/146 (37%), Gaps = 21/146 (14%)

Query: 5   NVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
             FM  ALE ++NA  A +   PVG V V + +I+S    +         HAE+ A++  
Sbjct: 21  QQFMLRALEVSRNALPACQPNPPVGCVLVKDGEIVSEGHTQAIGGN----HAEVEALKA- 75

Query: 63  CRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116
                   L +V  YVTLEPC        CA  +    I+++     +P       G   
Sbjct: 76  ----YNGDLSDVTAYVTLEPCSFVGRTPACAKTLVTCGIKKVVVAMLDPDLRNAGRGIDI 131

Query: 117 YTLATCHHSPEIYPGISEQRSRQIIQ 142
                     E+  G+  +     + 
Sbjct: 132 LKEGG----VEVEIGLCGEEVSAFLT 153


>gi|228940450|ref|ZP_04103019.1| Riboflavin biosynthesis protein [Bacillus thuringiensis serovar
           berliner ATCC 10792]
 gi|228979928|ref|ZP_04140248.1| Riboflavin biosynthesis protein [Bacillus thuringiensis Bt407]
 gi|228779807|gb|EEM28054.1| Riboflavin biosynthesis protein [Bacillus thuringiensis Bt407]
 gi|228819215|gb|EEM65271.1| Riboflavin biosynthesis protein [Bacillus thuringiensis serovar
           berliner ATCC 10792]
          Length = 348

 Score =  101 bits (253), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 36/125 (28%), Positives = 55/125 (44%), Gaps = 19/125 (15%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85
           VG+V V +N+I+    +          HAEI AIRM       E      +YVTLEPC+ 
Sbjct: 11  VGSVIVNDNRIVGVGAHMKAGE----PHAEIHAIRMAG-----EQARGATIYVTLEPCSH 61

Query: 86  ------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139
                 CA AI  A I+++     +P       G +    A      E+  G+ E+ S++
Sbjct: 62  YGRTGPCAEAIVQAGIKKVVVATLDPNPLVSGRGIKILQDAG----IEVLVGVCEEESKK 117

Query: 140 IIQDF 144
           + + F
Sbjct: 118 MNEVF 122


>gi|304437387|ref|ZP_07397346.1| riboflavin biosynthesis protein RibD [Selenomonas sp. oral taxon
           149 str. 67H29BP]
 gi|304369643|gb|EFM23309.1| riboflavin biosynthesis protein RibD [Selenomonas sp. oral taxon
           149 str. 67H29BP]
          Length = 367

 Score =  101 bits (253), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 40/151 (26%), Positives = 57/151 (37%), Gaps = 21/151 (13%)

Query: 2   KKGNVFMSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
           +    +M  AL  A+ A  R    P VGA+ V +  + +   +R         HAEI A+
Sbjct: 3   ETDESYMREALHLAEFARGRTSPNPLVGALIVRDGIVAASGWHRAAGE----PHAEIHAL 58

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENG 113
           RM   +          LYVTLEPC        CA A+  A I R+     +P       G
Sbjct: 59  RMAGELA-----RGATLYVTLEPCAHQGRTGPCAKAVIAAGITRVVVALRDPNPLVAGRG 113

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
                 A      E+  G+    +R+    F
Sbjct: 114 IAMLEAAG----IEVVTGVCAAEARRQNAAF 140


>gi|229128665|ref|ZP_04257643.1| Riboflavin biosynthesis protein [Bacillus cereus BDRD-Cer4]
 gi|228654858|gb|EEL10718.1| Riboflavin biosynthesis protein [Bacillus cereus BDRD-Cer4]
          Length = 348

 Score =  101 bits (253), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 36/125 (28%), Positives = 56/125 (44%), Gaps = 19/125 (15%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85
           VG+V V +N+I+    +          HAEI AIRM       E +    +YVTLEPC+ 
Sbjct: 11  VGSVIVNDNRIVGVGAHMKAGE----PHAEIHAIRMAG-----EQVRGATIYVTLEPCSH 61

Query: 86  ------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139
                 CA AI  A I+++     +P       G +    A      E+  G+ E+ S++
Sbjct: 62  HGRTGPCAEAIVQAGIKKVVVATLDPNPLVSGRGIKILQDAG----IEVLVGVCEEESKK 117

Query: 140 IIQDF 144
           + + F
Sbjct: 118 MNEVF 122


>gi|150019955|ref|YP_001305309.1| riboflavin biosynthesis protein RibD [Thermosipho melanesiensis
           BI429]
 gi|149792476|gb|ABR29924.1| riboflavin biosynthesis protein RibD [Thermosipho melanesiensis
           BI429]
          Length = 337

 Score =  101 bits (253), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 36/152 (23%), Positives = 58/152 (38%), Gaps = 25/152 (16%)

Query: 5   NVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
             +M  A+E ++      ++   P VGAV V N KII    +          HAE  AI 
Sbjct: 2   EKYMKLAIELSKKG--IGKVSPNPLVGAVIVKNGKIIGMGYHERYGG----FHAERNAIL 55

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
                  +E +    L+V LEPC        C   I  + I ++Y  + +P       G 
Sbjct: 56  NA-----KEDVKGSSLFVNLEPCSHHGKNLPCVDLIISSGISKVYIASVDPNPLVNGKGI 110

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
           +           E+  G+    ++ + + FFK
Sbjct: 111 EKLKKNG----IEVDVGLLSDEAKYLNRVFFK 138


>gi|229174066|ref|ZP_04301602.1| Riboflavin biosynthesis protein [Bacillus cereus MM3]
 gi|228609398|gb|EEK66684.1| Riboflavin biosynthesis protein [Bacillus cereus MM3]
          Length = 350

 Score =  101 bits (253), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 36/125 (28%), Positives = 56/125 (44%), Gaps = 19/125 (15%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85
           VG+V V +N+I+    +          HAEI AIRM       E      +YVTLEPC+ 
Sbjct: 11  VGSVIVNDNRIVGIGAHMKAGE----PHAEIHAIRMAG-----EQARGGTIYVTLEPCSH 61

Query: 86  ------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139
                 CA AI  A I+++     +P      +G +    A      E+  G+ E+ S++
Sbjct: 62  HGRTGPCAEAIVQAGIKKVVVATLDPNPLVSGSGIKILQDAG----IEVLVGVCEEESKK 117

Query: 140 IIQDF 144
           + + F
Sbjct: 118 MNEVF 122


>gi|294627697|ref|ZP_06706279.1| 5-amino-6-uracil reductase [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 11122]
 gi|292598049|gb|EFF42204.1| 5-amino-6-uracil reductase [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 11122]
          Length = 369

 Score =  101 bits (253), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 33/150 (22%), Positives = 57/150 (38%), Gaps = 21/150 (14%)

Query: 3   KGNVFMSCALEEAQN-AALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
             + +M+ AL  A+  A      P VG V V +   +    ++         HAE+ A+R
Sbjct: 11  DDHRWMAQALRLAERGAYTTRPNPMVGCVIVRDGVCVGEGFHQRAGG----PHAEVFALR 66

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
               +           YVTLEPC        CA A+  A + R+    ++P       G 
Sbjct: 67  AAGELA-----RGATAYVTLEPCAHYGRTPPCALALIEAGVMRVVAAMADPFPQVNGGGF 121

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
                A      ++  G+ + ++R + + F
Sbjct: 122 ALLREAG----IDVLSGVMQAQARTLNRGF 147


>gi|57102218|ref|XP_542193.1| PREDICTED: similar to CG10927-PA [Canis familiaris]
          Length = 355

 Score =  101 bits (253), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 30/159 (18%), Positives = 61/159 (38%), Gaps = 46/159 (28%)

Query: 26  VGAVAVLN--NKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQ--------------- 68
           VGAV V     ++++   + +        HA ++ I +  +   +               
Sbjct: 195 VGAVVVDPSSGRVLATGHDCSNAA-SPLLHATMVCIDLVAQGQGRGAYDLGPYPACSFVP 253

Query: 69  ---------------------------EILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
                                       +    DLY+T EPC MCA A+  +R++R++YG
Sbjct: 254 AVTPQSVRVGSVRKLDEDGDMHDDSVPYVCTGYDLYITREPCAMCAMALVHSRVQRVFYG 313

Query: 102 ASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140
           A +P  G +    + +     +H  +++ G+ E + R++
Sbjct: 314 APSPD-GALGTRFRIHARPDLNHRFQVFRGVLEAQCRRL 351


>gi|330899666|gb|EGH31085.1| riboflavin biosynthesis protein RibD [Pseudomonas syringae pv.
           japonica str. M301072PT]
          Length = 301

 Score =  101 bits (253), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 34/152 (22%), Positives = 53/152 (34%), Gaps = 21/152 (13%)

Query: 4   GNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
              +M+ ALE A+           VG V V   +I+    +          HAE+ A+R 
Sbjct: 9   DVHYMARALELARKGLYSTHPNPRVGCVIVREGRIVGEGWHARAGE----PHAEVHALRQ 64

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
              +           YVTLEPC        CA A+  A +  +     +P       G  
Sbjct: 65  AGELA-----RGATAYVTLEPCSHQGRTPPCADALIEAGLTGVVAAMQDPNPEVSGRGL- 118

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
              L   +    +  G+ E  +R + + F K 
Sbjct: 119 ---LRLMNAGIGVQCGVLESEARALNKGFLKR 147


>gi|167630209|ref|YP_001680708.1| riboflavin biosynthesis protein ribd [Heliobacterium modesticaldum
           Ice1]
 gi|167592949|gb|ABZ84697.1| riboflavin biosynthesis protein ribd [Heliobacterium modesticaldum
           Ice1]
          Length = 374

 Score =  101 bits (253), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 37/126 (29%), Positives = 50/126 (39%), Gaps = 19/126 (15%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC-- 83
           VGAV V + ++I    +R    K  T HAE+ A+R               LYVTLEPC  
Sbjct: 29  VGAVVVKDGRVIGEGYHR----KAGTPHAEVHALRQAGEAAC-----GGTLYVTLEPCNH 79

Query: 84  ----TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139
                 C  AI  A+I R+    ++P       G      A      E+  G+    +  
Sbjct: 80  HGRTPPCTEAIIAAKISRVVAAVADPNPQVAGQGFARLREAG----IEVDVGVMADAAIT 135

Query: 140 IIQDFF 145
           I Q FF
Sbjct: 136 INQPFF 141


>gi|167623139|ref|YP_001673433.1| riboflavin biosynthesis protein RibD [Shewanella halifaxensis
           HAW-EB4]
 gi|167353161|gb|ABZ75774.1| riboflavin biosynthesis protein RibD [Shewanella halifaxensis
           HAW-EB4]
          Length = 373

 Score =  101 bits (252), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 35/153 (22%), Positives = 57/153 (37%), Gaps = 21/153 (13%)

Query: 3   KGNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           + +  MS A+E AQ      R    VG+V V + +I+    +          HAE+ A+ 
Sbjct: 5   EDSQMMSLAIELAQKGMYTTRPNPSVGSVIVKDGEIVGEGYHIRAGG----PHAEVYALN 60

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           M               YVTLEPC        CA A+    + R+    ++P       G 
Sbjct: 61  MAGA-----DAKGATAYVTLEPCSHYGRTPPCAKALIEHGVSRVVIAVTDPNPEVSGRGI 115

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
                A      ++  G+  + ++Q+   F K 
Sbjct: 116 AMLRDAGI--RVDV--GLMTEEAKQVNLGFLKR 144


>gi|294667125|ref|ZP_06732350.1| 5-amino-6-uracil reductase [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 10535]
 gi|292603135|gb|EFF46561.1| 5-amino-6-uracil reductase [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 10535]
          Length = 369

 Score =  101 bits (252), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 33/150 (22%), Positives = 57/150 (38%), Gaps = 21/150 (14%)

Query: 3   KGNVFMSCALEEAQN-AALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
             + +M+ AL  A+  A      P VG V V +   +    ++         HAE+ A+R
Sbjct: 11  DDHRWMAQALRLAERGAYTTRPNPMVGCVIVRDGACVGEGFHQRAGG----PHAEVFALR 66

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
               +           YVTLEPC        CA A+  A + R+    ++P       G 
Sbjct: 67  AAGELA-----RGATAYVTLEPCAHYGRTPPCALALIEAGVMRVVAAMADPFPQVNGGGF 121

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
                A      ++  G+ + ++R + + F
Sbjct: 122 ALLREAG----IDVLSGVMQAQARTLNRGF 147


>gi|282896327|ref|ZP_06304349.1| Riboflavin biosynthesis protein RibD [Raphidiopsis brookii D9]
 gi|281198823|gb|EFA73702.1| Riboflavin biosynthesis protein RibD [Raphidiopsis brookii D9]
          Length = 376

 Score =  101 bits (252), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 33/152 (21%), Positives = 60/152 (39%), Gaps = 21/152 (13%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           ++   + M   L+ A+ A  R    P VGAV V + +I+    +          H E+ A
Sbjct: 14  IEFDALMMQRCLQLARLALGRTSPNPLVGAVVVKDGEIVGEGFHPRAGE----PHGEVFA 69

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
           +R        E      +YV+LEPC        C+ ++  A + ++  G  +P       
Sbjct: 70  LRAAG-----ERARGATIYVSLEPCNHYGRTPPCSLSLINAGVAKVVVGMVDPNPLVAGA 124

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
           G      A      E+  G+ E+  +++ + F
Sbjct: 125 GIARLRAAG----IEVIVGVEEEACQKLNEGF 152


>gi|221135084|ref|ZP_03561387.1| riboflavin biosynthesis protein RibD [Glaciecola sp. HTCC2999]
          Length = 381

 Score =  101 bits (252), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 40/154 (25%), Positives = 58/154 (37%), Gaps = 21/154 (13%)

Query: 4   GNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
               M+ AL  A+         P VG V  L+ +II    ++    +  TAHAE+ A+  
Sbjct: 9   DYAMMARALRLAKQGIYTAAPNPMVGCVITLDGEIIGEGHHQ----QAGTAHAEVNALWQ 64

Query: 62  -----GCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGI 110
                    L    L E   YVTLEPC+       CA A+  A I R+     +P     
Sbjct: 65  VNELIAQGKLVATQLKEATAYVTLEPCSHTGRTGPCADALIDAYIGRVVIAMQDPYSQVS 124

Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
             G     L   +   E+  G+    S  + + F
Sbjct: 125 GRG--IAKLQRANIQVEV--GLLAAESNALNRHF 154


>gi|78219882|gb|ABB39231.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Desulfovibrio
           desulfuricans subsp. desulfuricans str. G20]
          Length = 363

 Score =  101 bits (252), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 37/145 (25%), Positives = 54/145 (37%), Gaps = 19/145 (13%)

Query: 8   MSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M  A+  A+      +  P VGAV V + + ++R  +          HAEI  +R   R 
Sbjct: 1   MLEAVALAEKGRWATSPNPCVGAVLVKDGQTVARGWHTAYGK----PHAEIECLRDAARR 56

Query: 66  LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
                  E  L VTLEPC        C+ A+  A IR +  G  +P       G  F   
Sbjct: 57  GVNP--AECTLVVTLEPCNHTGKTPPCSIAVLQAGIRHVVVGMMDPNPVAQG-GANFLRE 113

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDF 144
                   +  G+  Q    ++ DF
Sbjct: 114 NG----VTVETGVCRQECEDVVDDF 134


>gi|288941493|ref|YP_003443733.1| riboflavin biosynthesis protein RibD [Allochromatium vinosum DSM
           180]
 gi|288896865|gb|ADC62701.1| riboflavin biosynthesis protein RibD [Allochromatium vinosum DSM
           180]
          Length = 381

 Score =  101 bits (252), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 35/153 (22%), Positives = 56/153 (36%), Gaps = 21/153 (13%)

Query: 3   KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
              + M+ A+  A+      +  P VG V V + +++    +R         HAE LA+ 
Sbjct: 13  DDRLHMARAIGLAERGRYTTDPNPRVGCVLVRDGQVVGEGWHRRAGE----PHAEPLALA 68

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
                   E   +  +YVTLEPC        CA A+  A + R+     +P       G 
Sbjct: 69  QAG-----ERARDATVYVTLEPCSHHGRTPPCAEALIAAGVARVVCAMVDPNPRVAGRGV 123

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
           +    A       +  G  E  +R +   F K 
Sbjct: 124 ERLRQAG----ISVDVGCLESEARALNPGFVKR 152


>gi|56751317|ref|YP_172018.1| riboflavin biosynthesis protein RibD [Synechococcus elongatus PCC
           6301]
 gi|56686276|dbj|BAD79498.1| riboflavin biosynthesis protein RibD [Synechococcus elongatus PCC
           6301]
          Length = 368

 Score =  101 bits (252), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 34/151 (22%), Positives = 55/151 (36%), Gaps = 21/151 (13%)

Query: 2   KKGNVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
            +   +M   LE A  AA +      VG + V   +I+    +          HAE+ A+
Sbjct: 3   DRDRQYMQRCLELAAQAAGQTAPNPMVGCIIVQGEEIVGEGFH--PAAGQP--HAEVFAL 58

Query: 60  RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113
           R        +      LYV LEPC        C+ A+  A ++R+  G  +P       G
Sbjct: 59  RQAG-----DRARGATLYVNLEPCNHYGRTPPCSEAVVAAGLKRVVVGMVDPDPRVTGGG 113

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
                 A      E+  G+ +    Q+ + F
Sbjct: 114 IARLQQAG----IEVTVGVEQAACEQMNEAF 140


>gi|168059034|ref|XP_001781510.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162667051|gb|EDQ53690.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 155

 Score =  101 bits (252), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 34/145 (23%), Positives = 54/145 (37%), Gaps = 21/145 (14%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +  A+ EA+     + IP+GA       +++ R  NR  +  D + HAE  A R   R  
Sbjct: 2   LDVAIAEARTGLGEDGIPIGAALFDAGGQLLGRGRNRRVQENDPSVHAETDAFRKAGRQR 61

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI----ENGTQFYTLATC 122
           S     +  +  TL PC  C+  +    I  +  G +    GG+    ENG Q   L + 
Sbjct: 62  S---YRDTIMVTTLAPCWYCSGLVRQFNIGTVVVGETVNFQGGVAWLRENGVQVVDLQS- 117

Query: 123 HHSPEIYPGISEQRSRQIIQDFFKE 147
                       +    I+  F   
Sbjct: 118 ------------RECADILSSFIAA 130


>gi|255003850|ref|ZP_05278651.1| riboflavin biosynthesis protein (ribD) [Anaplasma marginale str.
           Virginia]
          Length = 360

 Score =  101 bits (252), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 40/162 (24%), Positives = 60/162 (37%), Gaps = 28/162 (17%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEI---P-VGAVAV-LNNKIISRAGNRNRELKDVTAHAE 55
           M     FMS AL  A            P VG V       I+ R             HAE
Sbjct: 1   MFDDERFMSIALRLAHRGL--GNTYPNPTVGCVVTNSAGSIVGRGW--TAMGGRP--HAE 54

Query: 56  ILAIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGG 109
           ++A++               +YVTLEPC        C AA+  A +RR+   A +P    
Sbjct: 55  VVALKQAGEAA-----AGSTVYVTLEPCCHHGQTGPCTAALISAGVRRVVIAALDPDKRV 109

Query: 110 IENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF--KERR 149
              G +    +      E+  G+ +Q++ ++   FF  K +R
Sbjct: 110 SGKGARSLADSG----VEVKLGVLQQQAEELNVGFFYSKTKR 147


>gi|257388119|ref|YP_003177892.1| CMP/dCMP deaminase zinc-binding [Halomicrobium mukohataei DSM
           12286]
 gi|257170426|gb|ACV48185.1| CMP/dCMP deaminase zinc-binding [Halomicrobium mukohataei DSM
           12286]
          Length = 154

 Score =  101 bits (252), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 29/143 (20%), Positives = 55/143 (38%), Gaps = 1/143 (0%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
                +  A++ A+ AA R + P G+V V +++ I+ A NR     D+  H E+      
Sbjct: 10  DHERHVQSAIDLARAAADRGDRPFGSVLVRDDEQIAAASNRVVTEDDLRRHPELDLALAA 69

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGA-SNPKGGGIENGTQFYTLAT 121
            R  + E      +Y + EPC MCA  +    + R+ Y    +             + A 
Sbjct: 70  ERSYTPEERARTVMYTSTEPCPMCAGGLRSVGLGRIVYSVGGDEIHEFTGGEPTVRSGAI 129

Query: 122 CHHSPEIYPGISEQRSRQIIQDF 144
                ++   +  +    + + F
Sbjct: 130 LDGVTDVTGPVCHEAGLAVHEAF 152


>gi|170693630|ref|ZP_02884788.1| riboflavin biosynthesis protein RibD [Burkholderia graminis C4D1M]
 gi|170141412|gb|EDT09582.1| riboflavin biosynthesis protein RibD [Burkholderia graminis C4D1M]
          Length = 385

 Score =  101 bits (252), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 36/151 (23%), Positives = 54/151 (35%), Gaps = 18/151 (11%)

Query: 2   KKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
           +   V M  AL  A+      +  P VG V V N ++I     +         HAEI A+
Sbjct: 4   QTDFVHMERALALARRGMYTTDPNPRVGCVIVKNGEVIGEGFTQPAGQD----HAEIRAM 59

Query: 60  RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113
           +          L     YVTLEPC        CA A+  A++ R+     +P       G
Sbjct: 60  KDA--RSRGHDLRGATAYVTLEPCSHFGRTPPCANALIEAQVARVVAAMEDPNPQVSGRG 117

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
                 A      E+  G+    + ++   F
Sbjct: 118 LAILRDAG----IEVRCGLLANEAHELNIGF 144


>gi|254474243|ref|ZP_05087633.1| Cytidine and deoxycytidylate deaminase zinc-binding region domain
           protein [Pseudovibrio sp. JE062]
 gi|211956617|gb|EEA91827.1| Cytidine and deoxycytidylate deaminase zinc-binding region domain
           protein [Pseudovibrio sp. JE062]
          Length = 171

 Score =  101 bits (252), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 33/128 (25%), Positives = 48/128 (37%), Gaps = 8/128 (6%)

Query: 24  IPVG-AVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEP 82
            P G A+   +  ++++A NR     D ++H E+ AIR  C+       P   LY T EP
Sbjct: 32  TPFGGALYGSDGTLLAQAYNRMVRECDPSSHGELNAIREACKKYQTRSFPGSILYATSEP 91

Query: 83  CTMCAAAISLARIRRLYYGA-SNPKGGGI------ENGTQFYTLATCHHSPEIYPGISEQ 135
           C MC  A     +  L +GA +N                            EI  G+   
Sbjct: 92  CPMCMTATISIGVETLVFGAFTNEDAINFWPQEMDLRARDIAEHVIMRPKIEIIEGVERD 151

Query: 136 RSRQIIQD 143
             RQ+  D
Sbjct: 152 ACRQLFTD 159


>gi|77165491|ref|YP_344016.1| riboflavin biosynthesis protein RibD [Nitrosococcus oceani ATCC
           19707]
 gi|254433444|ref|ZP_05046952.1| riboflavin biosynthesis protein RibD [Nitrosococcus oceani AFC27]
 gi|76883805|gb|ABA58486.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Nitrosococcus
           oceani ATCC 19707]
 gi|207089777|gb|EDZ67048.1| riboflavin biosynthesis protein RibD [Nitrosococcus oceani AFC27]
          Length = 365

 Score =  101 bits (252), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 33/149 (22%), Positives = 55/149 (36%), Gaps = 21/149 (14%)

Query: 8   MSCALEEAQNAA-LRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M+ AL+ AQ      +  P VG V V   +I+    ++        +HAEI A+R     
Sbjct: 1   MARALKLAQRGLFTTDPNPRVGCVLVRGGEIVGEGWHQQAGD----SHAEINALRQAG-- 54

Query: 66  LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
                      YVTLEPC        C  A+  A + R+     +P       G      
Sbjct: 55  ---IRAQGSTCYVTLEPCCHRGRTPPCTEALIEAGVVRVVAAMGDPHPKVASQGLAQLRE 111

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKER 148
           A      ++  G+ ++ ++ +   F +  
Sbjct: 112 AGL----QVEHGLLQEEAQALNVGFVQRL 136


>gi|303245768|ref|ZP_07332051.1| riboflavin biosynthesis protein RibD [Desulfovibrio fructosovorans
           JJ]
 gi|302493031|gb|EFL52896.1| riboflavin biosynthesis protein RibD [Desulfovibrio fructosovorans
           JJ]
          Length = 380

 Score =  101 bits (252), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 38/151 (25%), Positives = 58/151 (38%), Gaps = 23/151 (15%)

Query: 4   GNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
              FM+ ALE A+    R  +   P VGAV V +  I++   ++         HAE+  +
Sbjct: 5   DADFMARALELAERG--RGFVMPNPRVGAVLVRDGGIVAEGWHKVFGG----PHAEVECL 58

Query: 60  RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113
               R           +YVTLEPC        C+  +  A I R+  G  +P       G
Sbjct: 59  HDAERKGVSP--AGGTMYVTLEPCNHFGKTPPCSRTLLDAGIARVVVGCLDPNP-VAGGG 115

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
                        E+  G+ E + R+ + DF
Sbjct: 116 AALLRQEG----VEVTVGVLESQCREAVADF 142


>gi|319941823|ref|ZP_08016145.1| AMP deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Sutterella wadsworthensis 3_1_45B]
 gi|319804756|gb|EFW01623.1| AMP deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Sutterella wadsworthensis 3_1_45B]
          Length = 415

 Score =  101 bits (252), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 35/150 (23%), Positives = 59/150 (39%), Gaps = 20/150 (13%)

Query: 4   GNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
            + +M  AL +A+ A      P   VGAV V N +++     +         HAE++A+R
Sbjct: 55  DDAWMDLALAQARKAWRI-SPPNPSVGAVIVRNGRLVGAGHTQRTGG----PHAEVMALR 109

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
                     +    +YVTLEPC        CA A+  +++ R+     +P       G 
Sbjct: 110 SAFERGLS--VEGATVYVTLEPCSHYGRTPPCALALIQSKVGRVVAAVGDPNPKVHGRGI 167

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
           +    A          G+ E  +R++   F
Sbjct: 168 RMLLEAGIP----AELGVREAEAREVNIAF 193


>gi|229145969|ref|ZP_04274348.1| Riboflavin biosynthesis protein [Bacillus cereus BDRD-ST24]
 gi|228637577|gb|EEK94028.1| Riboflavin biosynthesis protein [Bacillus cereus BDRD-ST24]
          Length = 348

 Score =  101 bits (252), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 36/125 (28%), Positives = 55/125 (44%), Gaps = 19/125 (15%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85
           VG+V V +N+I+    +          HAEI AIRM       E      +YVTLEPC+ 
Sbjct: 11  VGSVIVNDNRIVGVGAHMKAGE----PHAEIHAIRMAG-----EQARGATIYVTLEPCSH 61

Query: 86  ------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139
                 CA AI  A I+++     +P       G +    A      E+  G+ E+ S++
Sbjct: 62  HGRTGPCAEAIVQAGIKKVVVATLDPNPLVSGRGIKILQDAG----IEVLVGVCEEESKK 117

Query: 140 IIQDF 144
           + + F
Sbjct: 118 MNEVF 122


>gi|226939661|ref|YP_002794734.1| RibD [Laribacter hongkongensis HLHK9]
 gi|226714587|gb|ACO73725.1| RibD [Laribacter hongkongensis HLHK9]
          Length = 383

 Score =  101 bits (252), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 34/150 (22%), Positives = 53/150 (35%), Gaps = 21/150 (14%)

Query: 3   KGNVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
             + +M+ AL+ A+           VG V V + ++     +        T HAE  A+ 
Sbjct: 5   DDHRYMARALQLARLGMTSTAPNPRVGCVVVSDGQVAGEGWHVRA----GTPHAERHALA 60

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           M       E       YVTLEPC        CA A+  A + R+     +P       G 
Sbjct: 61  MAG-----ERARGATAYVTLEPCSHFGRTPPCADALLQAGVGRVVAAMVDPNPLVAGQGM 115

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
                A      E   G+ E  + ++ + F
Sbjct: 116 TRLAAAG----IECASGLLEAEACELNRGF 141


>gi|330507217|ref|YP_004383645.1| hypothetical protein MCON_1091 [Methanosaeta concilii GP-6]
 gi|328928025|gb|AEB67827.1| conserved domain protein [Methanosaeta concilii GP-6]
          Length = 281

 Score =  101 bits (252), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 37/140 (26%), Positives = 54/140 (38%), Gaps = 24/140 (17%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAV----LNNKIISR--AGNRNRELKDVTAHAEI 56
           +G+ +M  A   A+ +      P  A+ +      ++I+      N+     D TAHAEI
Sbjct: 100 EGDRWMQLACLAARESVEEKGGPFAALILQIDNCTDQILRYWINHNQVTSALDPTAHAEI 159

Query: 57  LAIRMGCRILSQEIL----------------PEVDLYVTLEPCTMCAAAISLARIRRLYY 100
           +AIR  C  L    L                    +Y + EPC MC AAI  A I  L +
Sbjct: 160 MAIRSACASLGVFDLGSIRKDESKLAQPGDLSHCVIYSSAEPCPMCYAAICWANIPMLLF 219

Query: 101 GASNPKGGGIENGTQFYTLA 120
            A+  +      G  F   A
Sbjct: 220 AAT--RFDAATQGVDFSDEA 237


>gi|261493709|ref|ZP_05990228.1| riboflavin biosynthesis protein [Mannheimia haemolytica serotype A2
           str. BOVINE]
 gi|261494376|ref|ZP_05990870.1| riboflavin biosynthesis protein [Mannheimia haemolytica serotype A2
           str. OVINE]
 gi|261310025|gb|EEY11234.1| riboflavin biosynthesis protein [Mannheimia haemolytica serotype A2
           str. OVINE]
 gi|261310709|gb|EEY11893.1| riboflavin biosynthesis protein [Mannheimia haemolytica serotype A2
           str. BOVINE]
          Length = 403

 Score =  101 bits (252), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 37/153 (24%), Positives = 57/153 (37%), Gaps = 25/153 (16%)

Query: 3   KGNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
               +M+ A+  A+ A  R      P VG V V N  II+   ++    K  + HAE  A
Sbjct: 40  TDVQYMAYAITLAEKA--RGWTSPNPLVGCVIVKNGNIIAEGYHQ----KAGSWHAERNA 93

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
           I     +  +E L     YVTLEPC        C+  +    I++++ G+ +P       
Sbjct: 94  I-----LNCEEDLTGATAYVTLEPCCHHGRTPPCSELLIERGIKKVFIGSRDPNPLVSGK 148

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
           G      A      E+           +   FF
Sbjct: 149 GAAQLRAAG----IEVVEDFMRTECDALNPIFF 177


>gi|332519663|ref|ZP_08396127.1| riboflavin biosynthesis protein RibD [Lacinutrix algicola 5H-3-7-4]
 gi|332044222|gb|EGI80416.1| riboflavin biosynthesis protein RibD [Lacinutrix algicola 5H-3-7-4]
          Length = 321

 Score =  101 bits (252), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 40/146 (27%), Positives = 59/146 (40%), Gaps = 19/146 (13%)

Query: 8   MSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M  A++ A N     R    VGAV V NN II               HAE+ AI     +
Sbjct: 1   MQRAIQIANNGLGTTRPNPMVGAVIVHNNIIIGEGFTSAYGGN----HAEVNAINA---V 53

Query: 66  LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
            ++++L +  LYVTLEPC        C+  I    I  +  G  +        G +    
Sbjct: 54  KNKDLLKKSTLYVTLEPCSHYGKTPPCSDLIIHHNIPNVVIGCVDDNPEVAGKGIKKLMG 113

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFF 145
           A C    ++  GI E + ++  + FF
Sbjct: 114 ANC----KVTLGILENKCKEHHKRFF 135


>gi|332967791|gb|EGK06895.1| riboflavin biosynthesis protein RibD [Kingella kingae ATCC 23330]
          Length = 360

 Score =  101 bits (252), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 36/150 (24%), Positives = 55/150 (36%), Gaps = 21/150 (14%)

Query: 3   KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +    M  ALE A       +  P VG V    ++II +  +   +      HAE+ AIR
Sbjct: 7   QDTQHMQRALELAWQGRFSTSPNPRVGCVIAHGSQIIGQGFH--VQAGSP--HAEVHAIR 62

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
               +           YVTLEPC        CA  +  A + R+    ++P       G 
Sbjct: 63  QAGELA-----RGATAYVTLEPCSHYGRTPPCAEGLIAAGVSRVVAAMTDPNPLVAGKGL 117

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
                A       +  G+ E  +RQ+ + F
Sbjct: 118 AMLQAAG----IMVEQGLLEHEARQLNRGF 143


>gi|149187995|ref|ZP_01866290.1| pyrimidine reductase [Vibrio shilonii AK1]
 gi|148837983|gb|EDL54925.1| pyrimidine reductase [Vibrio shilonii AK1]
          Length = 369

 Score =  101 bits (252), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 41/152 (26%), Positives = 59/152 (38%), Gaps = 21/152 (13%)

Query: 4   GNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
               MS ALE A+         P VG V  LNN+++    ++         HAE+ A+RM
Sbjct: 8   DYQMMSRALELAKRGRFTTAPNPNVGCVITLNNEVVGEGYHKKAGE----PHAEVHALRM 63

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
                  E       YVTLEPC        CA  +  A + ++    S+P       G  
Sbjct: 64  AA-----ERAKGATAYVTLEPCSHYGRTPPCAEGLIKAGVSKVICAMSDPNPQVAGRGFN 118

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
               A      E+  G+ EQ +R +   F K+
Sbjct: 119 MLREAG----IEVSVGLLEQDARALNPGFLKK 146


>gi|257868250|ref|ZP_05647903.1| riboflavin-specific deaminase [Enterococcus casseliflavus EC30]
 gi|257874477|ref|ZP_05654130.1| riboflavin biosynthesis protein RibD [Enterococcus casseliflavus
           EC10]
 gi|257802364|gb|EEV31236.1| riboflavin-specific deaminase [Enterococcus casseliflavus EC30]
 gi|257808641|gb|EEV37463.1| riboflavin biosynthesis protein RibD [Enterococcus casseliflavus
           EC10]
          Length = 358

 Score =  100 bits (251), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 37/139 (26%), Positives = 54/139 (38%), Gaps = 19/139 (13%)

Query: 4   GNVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
            N +M  A+ EA+    +      VGAV V   ++I++  +          HAE  AI  
Sbjct: 2   HNEYMRLAIAEAKKGRYQTFTNPLVGAVIVKEQRVIAKGAHLVYGQ----PHAERNAIEQ 57

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
                S E L    LYVTLEPC        C   I  + I+++  G  +P       G +
Sbjct: 58  ---CHSSEDLINSTLYVTLEPCNHQGKQPPCTQLIIDSGIKKVVVGQLDPNPIVAGQGKR 114

Query: 116 FYTLATCHHSPEIYPGISE 134
           F          ++  GI E
Sbjct: 115 FLEEQG----IDVLVGIEE 129


>gi|149372326|ref|ZP_01891514.1| riboflavin biosynthesis protein ribD [unidentified eubacterium
           SCB49]
 gi|149354716|gb|EDM43279.1| riboflavin biosynthesis protein ribD [unidentified eubacterium
           SCB49]
          Length = 340

 Score =  100 bits (251), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 34/147 (23%), Positives = 62/147 (42%), Gaps = 21/147 (14%)

Query: 8   MSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           M   ++ A+        P   VG+V V+++KII    +          HAE+ AI     
Sbjct: 1   MFRCIQLAKKGLGYT-YPNPLVGSVIVVDDKIIGEGWHLEAGK----PHAEVNAINS--- 52

Query: 65  ILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
           +  +++L +  +YV+LEPC        CA  I    I+ +  G+++P       G     
Sbjct: 53  VTDEKLLEKATIYVSLEPCSHFGKTPPCADLIVTKGIKNIVIGSTDPNPKVAGKGIIKLM 112

Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFF 145
            A C    ++  G+ ++    + + FF
Sbjct: 113 QAGC----KVKVGVLQKECDALNKRFF 135


>gi|254410513|ref|ZP_05024292.1| riboflavin biosynthesis protein RibD [Microcoleus chthonoplastes
           PCC 7420]
 gi|196182719|gb|EDX77704.1| riboflavin biosynthesis protein RibD [Microcoleus chthonoplastes
           PCC 7420]
          Length = 380

 Score =  100 bits (251), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 35/149 (23%), Positives = 54/149 (36%), Gaps = 21/149 (14%)

Query: 4   GNVFMSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
               M   +E A+ A  R    P VGAV V +  ++    +          HAEI A+R 
Sbjct: 26  DRTMMQRCIELARRALGRTSPNPLVGAVIVRDGAMVGEGFH----PGAGQPHAEIFALRQ 81

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
                         +YV LEPC        C  A+  A + ++  G  +P       G +
Sbjct: 82  AGDKSQ-----GATIYVNLEPCNHYGRTPPCTEALIAAGVAKVVVGMVDPNPLVAGGGIE 136

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDF 144
               A      E+  G+  +  RQ+ + F
Sbjct: 137 RLKKAG----IEVVVGVETEACRQLNEAF 161


>gi|56416383|ref|YP_153457.1| riboflavin biosynthesis protein [Anaplasma marginale str. St.
           Maries]
 gi|222474753|ref|YP_002563168.1| riboflavin biosynthesis protein (ribD) [Anaplasma marginale str.
           Florida]
 gi|254994610|ref|ZP_05276800.1| riboflavin biosynthesis protein (ribD) [Anaplasma marginale str.
           Mississippi]
 gi|56387615|gb|AAV86202.1| riboflavin biosynthesis protein [Anaplasma marginale str. St.
           Maries]
 gi|222418889|gb|ACM48912.1| riboflavin biosynthesis protein (ribD) [Anaplasma marginale str.
           Florida]
          Length = 371

 Score =  100 bits (251), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 40/162 (24%), Positives = 60/162 (37%), Gaps = 28/162 (17%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEI---P-VGAVAV-LNNKIISRAGNRNRELKDVTAHAE 55
           M     FMS AL  A            P VG V       I+ R             HAE
Sbjct: 1   MFDDERFMSIALRLAHRGL--GNTYPNPTVGCVVTNSAGSIVGRGW--TAMGGRP--HAE 54

Query: 56  ILAIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGG 109
           ++A++               +YVTLEPC        C AA+  A +RR+   A +P    
Sbjct: 55  VVALKQAGEAA-----AGSTVYVTLEPCCHHGQTGPCTAALISAGVRRVVIAALDPDKRV 109

Query: 110 IENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF--KERR 149
              G +    +      E+  G+ +Q++ ++   FF  K +R
Sbjct: 110 SGKGARSLADSG----VEVKLGVLQQQAEELNVGFFYSKTKR 147


>gi|332851042|ref|XP_003316032.1| PREDICTED: tRNA-specific adenosine deaminase-like protein 3 [Pan
           troglodytes]
          Length = 367

 Score =  100 bits (251), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 34/155 (21%), Positives = 61/155 (39%), Gaps = 42/155 (27%)

Query: 26  VGAVAVLN--NKIISRAGNRNRELKDVTAHAEILAIRMGCRI--LSQEILP--------- 72
           VGAV V    +++++   + +    +   HA ++ + +  R        L          
Sbjct: 211 VGAVVVDPASDRVLATGHDCSCAD-NPLLHAVMVCVDLVARGQGRGTYDLRPFPACSFAP 269

Query: 73  ---------------------------EVDLYVTLEPCTMCAAAISLARIRRLYYGASNP 105
                                        DLYVT EPC MCA A+  ARI R++YGA +P
Sbjct: 270 AAAPQAVRAGAVRKLDADEDGLPYLCTGYDLYVTREPCAMCAMALVHARILRVFYGAPSP 329

Query: 106 KGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140
             G +    + +     +H  +++ G+ E++ R +
Sbjct: 330 D-GALGTRFRIHARPDLNHRFQVFRGVLEEQCRWL 363


>gi|314924237|gb|EFS88068.1| riboflavin biosynthesis protein RibD [Propionibacterium acnes
           HL001PA1]
 gi|314964911|gb|EFT09010.1| riboflavin biosynthesis protein RibD [Propionibacterium acnes
           HL082PA2]
 gi|315103908|gb|EFT75884.1| riboflavin biosynthesis protein RibD [Propionibacterium acnes
           HL050PA2]
 gi|327325608|gb|EGE67407.1| riboflavin biosynthesis protein RibD [Propionibacterium acnes
           HL103PA1]
          Length = 331

 Score =  100 bits (251), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 35/144 (24%), Positives = 56/144 (38%), Gaps = 21/144 (14%)

Query: 8   MSCALEEAQNAALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  AL+ A  +   +  P VG V V  +++I +  +R       T HAE+ A+R      
Sbjct: 9   MVLALDMAAKSPCPDPNPRVGCVIVAEDRVIGQGWHR----GAGTPHAEVEALRQAG--- 61

Query: 67  SQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
             +        VTLEPC        C+ A+  A I R+    S+P            T  
Sbjct: 62  --DDAKGATAVVTLEPCHHTGRTGPCSHALVDAGIARVVIAQSDPNPVASGGEQWLRT-- 117

Query: 121 TCHHSPEIYPGISEQRSRQIIQDF 144
              H  E+  G+  + +  +  D+
Sbjct: 118 ---HGVEVVTGVLSEEATALNADW 138


>gi|315093789|gb|EFT65765.1| riboflavin biosynthesis protein RibD [Propionibacterium acnes
           HL060PA1]
          Length = 331

 Score =  100 bits (251), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 35/144 (24%), Positives = 56/144 (38%), Gaps = 21/144 (14%)

Query: 8   MSCALEEAQNAALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  AL+ A  +   +  P VG V V  +++I +  +R       T HAE+ A+R      
Sbjct: 9   MVLALDMAAKSPCPDPNPRVGCVIVAEDRVIGQGWHR----GAGTPHAEVEALRQAG--- 61

Query: 67  SQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
             +        VTLEPC        C+ A+  A I R+    S+P            T  
Sbjct: 62  --DDAKGATAVVTLEPCHHTGRTGPCSHALVDAGIARVVIAQSDPNPVASGGEQWLRT-- 117

Query: 121 TCHHSPEIYPGISEQRSRQIIQDF 144
              H  E+  G+  + +  +  D+
Sbjct: 118 ---HGVEVVTGVLSEEATALNADW 138


>gi|186475387|ref|YP_001856857.1| riboflavin biosynthesis protein RibD [Burkholderia phymatum STM815]
 gi|184191846|gb|ACC69811.1| riboflavin biosynthesis protein RibD [Burkholderia phymatum STM815]
          Length = 373

 Score =  100 bits (251), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 38/151 (25%), Positives = 56/151 (37%), Gaps = 18/151 (11%)

Query: 2   KKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
           +   V M  AL  A       +  P VG V V N ++I     +         HAEI A+
Sbjct: 4   QTDFVHMERALALAWRGLYTTDPNPRVGCVLVKNGEVIGEGFTQPAGRD----HAEIQAL 59

Query: 60  RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113
           +   +      L     YVTLEPC        CA A+  A++ R+     +P       G
Sbjct: 60  KDARKRGH--DLQGATAYVTLEPCSHFGRTPPCANALIEAKLARVVAAMEDPNPRVSGRG 117

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
                 A      E+  G+ E  +R++   F
Sbjct: 118 LSMLREAG----IEVRCGLLENDARELNIGF 144


>gi|94986602|ref|YP_594535.1| pyrimidine reductase, riboflavin biosynthesis [Lawsonia
           intracellularis PHE/MN1-00]
 gi|94730851|emb|CAJ54213.1| Pyrimidine reductase, riboflavin biosynthesis [Lawsonia
           intracellularis PHE/MN1-00]
          Length = 382

 Score =  100 bits (251), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 34/145 (23%), Positives = 51/145 (35%), Gaps = 19/145 (13%)

Query: 8   MSCALEEAQNA-ALRNEIPV-GAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M  A+  A+         PV G+V + N KI++   +          HAE+L I      
Sbjct: 13  MKYAISIAEKGRWDTAPNPVVGSVLIQNGKIVAEGFHSLYGG----PHAEVLCINDAKNK 68

Query: 66  LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
                L +  L  TLEPC        C  AI    I+ +  G  +P            + 
Sbjct: 69  HIN--LSDCTLITTLEPCNHYGKTPPCTKAIIDNNIKHVIIGTKDPTTLASGGVHTLTSA 126

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDF 144
                   +  GI E+  + +I DF
Sbjct: 127 -----GITVEVGILEKECQALIADF 146


>gi|269958267|ref|YP_003328054.1| riboflavin biosynthesis protein [Anaplasma centrale str. Israel]
 gi|269848096|gb|ACZ48740.1| riboflavin biosynthesis protein [Anaplasma centrale str. Israel]
          Length = 365

 Score =  100 bits (251), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 40/156 (25%), Positives = 58/156 (37%), Gaps = 26/156 (16%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEI---P-VGAVAVLN-NKIISRAGNRNRELKDVTAHAE 55
           M     FMS AL  A+           P VG V       I+ R             HAE
Sbjct: 1   MFNDERFMSIALRLARRGL--GNTYPNPTVGCVITNGAGSIVGRGW--TAMGGRP--HAE 54

Query: 56  ILAIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGG 109
           ++A+R                YVTLEPC        C AA+  A +RR+   A +P    
Sbjct: 55  VVALRHAGEAA-----AGSTAYVTLEPCCHRGQTGPCTAALINAGVRRVVIAALDPDERV 109

Query: 110 IENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
              G +  + A      E+  G+ +Q++ ++   FF
Sbjct: 110 SGKGAKSLSEAG----VEVKLGVLQQQAEELNAGFF 141


>gi|168025673|ref|XP_001765358.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162683411|gb|EDQ69821.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 393

 Score =  100 bits (251), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 32/151 (21%), Positives = 59/151 (39%), Gaps = 21/151 (13%)

Query: 2   KKGNVFMSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
           +    +M   ++ A+ A  +    P VG V V + +I+ R  +          HAE+ A+
Sbjct: 26  EVDAFYMRMCVDLARQAVGKTSPNPIVGCVIVKDGRIVGRGFHPKAGE----PHAEVFAL 81

Query: 60  RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113
           R    +           YV+LEPC        C+ A+  A+++R+  G  +P       G
Sbjct: 82  REAGPLAQ-----GATAYVSLEPCNHYGRTPPCSQALVKAKLKRVVVGVVDPNPQVGGKG 136

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
            +       +   E+  G+ E    +  + F
Sbjct: 137 IKTLR----NAGIEVVVGVEETLCLKANESF 163


>gi|332307440|ref|YP_004435291.1| riboflavin biosynthesis protein RibD [Glaciecola agarilytica
           4H-3-7+YE-5]
 gi|332174769|gb|AEE24023.1| riboflavin biosynthesis protein RibD [Glaciecola agarilytica
           4H-3-7+YE-5]
          Length = 372

 Score =  100 bits (251), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 36/153 (23%), Positives = 57/153 (37%), Gaps = 22/153 (14%)

Query: 4   GNVFMSCALEEAQNA-ALRNEIP-VGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIR 60
               M+ A+  A+      +  P VG V       I+ +  ++    K  T HAEI AI 
Sbjct: 8   DAKMMALAIRLAEKGQYTTSPNPNVGCVLTDPKGNIVGQGWHQ----KAGTPHAEIHAIA 63

Query: 61  MGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGT 114
                   E       YVTLEPC        C+ A+  A + R+     +P      +G 
Sbjct: 64  QAG-----ERTKGATAYVTLEPCNHHGRTGPCSEALIKAGVSRVVAAMVDPNPLVAGSGL 118

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
           Q  + A       +  G+ E+ ++ +   F K 
Sbjct: 119 QKLSDAG----VAVSSGLLEREAKALNLGFIKR 147


>gi|83319309|ref|YP_424006.1| cytidine/deoxycytidylate deaminase zinc-binding domain-containing
           protein [Mycoplasma capricolum subsp. capricolum ATCC
           27343]
 gi|83283195|gb|ABC01127.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein
           [Mycoplasma capricolum subsp. capricolum ATCC 27343]
          Length = 147

 Score =  100 bits (251), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 44/150 (29%), Positives = 68/150 (45%), Gaps = 4/150 (2%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAI 59
           M   N  +   + E++ A   N+IPV    +  NN I+S A N   + KD++ HAEI  I
Sbjct: 1   MDDFNNILDLLINESKKAIKHNDIPVSCCIIDSNNNILSLAINSRYKNKDISQHAEINVI 60

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
                 L+   L +  L  TLEPC MC +AI   +I  +YY   + K G I+N       
Sbjct: 61  NDLISKLNSFNLSKYKLITTLEPCMMCYSAIKQVKINTIYYLVDSYKFG-IKNNYSI-ND 118

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
              +   +I     +    +++  FF  +R
Sbjct: 119 QNLN-LIQIKNQKKQSEYIKLLNIFFINKR 147


>gi|58583602|ref|YP_202618.1| cytosine deaminase [Xanthomonas oryzae pv. oryzae KACC10331]
 gi|84625409|ref|YP_452781.1| cytosine deaminase [Xanthomonas oryzae pv. oryzae MAFF 311018]
 gi|188575147|ref|YP_001912076.1| cytosine deaminase [Xanthomonas oryzae pv. oryzae PXO99A]
 gi|58428196|gb|AAW77233.1| cytosine deaminase [Xanthomonas oryzae pv. oryzae KACC10331]
 gi|84369349|dbj|BAE70507.1| cytosine deaminase [Xanthomonas oryzae pv. oryzae MAFF 311018]
 gi|188519599|gb|ACD57544.1| cytosine deaminase [Xanthomonas oryzae pv. oryzae PXO99A]
          Length = 151

 Score =  100 bits (251), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 29/135 (21%), Positives = 49/135 (36%), Gaps = 13/135 (9%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +  A+ EA+       IP+GA     + +++    NR  +  D + H E  A R   R  
Sbjct: 11  LDTAIIEARQGLAEGGIPIGAALYHNDGRLLGCGHNRRVQENDPSVHGETDAFRKAGR-- 68

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
            Q    +  +  TL PC  C+  +    I  +  G S    GGI    +        H  
Sbjct: 69  -QRRYKDTIMVTTLAPCWYCSGLVRQFNIGTVVVGESLTFQGGIAWLRE--------HGV 119

Query: 127 EIYPGISEQRSRQII 141
            +   +  Q    ++
Sbjct: 120 NVID-LQSQECIDLL 133


>gi|58584287|ref|YP_197860.1| pyrimidine deaminase and reductase [Wolbachia endosymbiont strain
           TRS of Brugia malayi]
 gi|58418603|gb|AAW70618.1| Pyrimidine deaminase and reductase [Wolbachia endosymbiont strain
           TRS of Brugia malayi]
          Length = 378

 Score =  100 bits (251), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 34/155 (21%), Positives = 56/155 (36%), Gaps = 25/155 (16%)

Query: 4   GNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
            N FMS AL  A+       +   P VG + V +  ++               HAE+ A+
Sbjct: 3   DNHFMSIALSLAEK--TLGNVAPNPAVGCIIVKDGVVVGEGH----TGIGGRPHAEVAAL 56

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENG 113
           +               +YVTLEPC        C   I  + I+++   A +P       G
Sbjct: 57  QSAKGSTH-----GATMYVTLEPCCHYGVTEPCIIEIIRSGIKKVVVAAIDPDKRVSGGG 111

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKER 148
            +    A       +  GI ++ + ++   FF  R
Sbjct: 112 IKALEEAG----ITVEQGIMQEEAEKLNIGFFTTR 142


>gi|220934731|ref|YP_002513630.1| riboflavin biosynthesis protein RibD [Thioalkalivibrio sp.
           HL-EbGR7]
 gi|219996041|gb|ACL72643.1| riboflavin biosynthesis protein RibD [Thioalkalivibrio sp.
           HL-EbGR7]
          Length = 369

 Score =  100 bits (251), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 36/154 (23%), Positives = 55/154 (35%), Gaps = 21/154 (13%)

Query: 2   KKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
           +     M+ AL+ A+      +  P VG V V + +++    +          HAEILA+
Sbjct: 4   ETDTRHMARALQLARRGLYTTDPNPRVGCVMVRDGQVLGEGFHVRAGE----PHAEILAL 59

Query: 60  RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113
           R               +YVTLEPC        CA A+  A + R+     +P       G
Sbjct: 60  RQAGEAA-----RGATVYVTLEPCAHFGRTPPCADALIHAGVARVVAAMVDPNPRVAGQG 114

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
               T A          G+ E  +R +   F   
Sbjct: 115 LARLTAAG----ITTASGVLEAEARALNPGFISR 144


>gi|242240315|ref|YP_002988496.1| riboflavin biosynthesis protein RibD [Dickeya dadantii Ech703]
 gi|242132372|gb|ACS86674.1| riboflavin biosynthesis protein RibD [Dickeya dadantii Ech703]
          Length = 370

 Score =  100 bits (251), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 37/155 (23%), Positives = 58/155 (37%), Gaps = 21/155 (13%)

Query: 3   KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
               +M+ ALE A+      +  P VG V V + +++    ++         HAE+ A+R
Sbjct: 5   SDEFYMARALELARRGIFTTSPNPNVGCVIVRDGEVVGEGFHQKAGE----PHAEVHALR 60

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           M              +YVTLEPC        CA A+  A + R+     +P       G 
Sbjct: 61  MAGDKAQ-----GATVYVTLEPCSHHGRTPPCADALIAAGVARVVAAMQDPNPQVAGRGL 115

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
                A      E+  G+    +  I + F K  R
Sbjct: 116 HRLHQAG----IEVCHGVMADAAENINRGFLKRMR 146


>gi|87161517|ref|YP_494408.1| riboflavin biosynthesis protein [Staphylococcus aureus subsp.
           aureus USA300_FPR3757]
 gi|88195585|ref|YP_500391.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp.
           aureus NCTC 8325]
 gi|87127491|gb|ABD22005.1| riboflavin biosynthesis protein [Staphylococcus aureus subsp.
           aureus USA300_FPR3757]
 gi|87203143|gb|ABD30953.1| riboflavin biosynthesis protein RibD [Staphylococcus aureus subsp.
           aureus NCTC 8325]
          Length = 334

 Score =  100 bits (251), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 35/131 (26%), Positives = 56/131 (42%), Gaps = 24/131 (18%)

Query: 25  PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC- 83
           PVGAV V   +I+    +  +  K    HAE+ A+ M      Q+      +Y+TLEPC 
Sbjct: 11  PVGAVVVKEGRIVGIGAHLRKGDK----HAEVQALDMA-----QQNAEGATIYITLEPCS 61

Query: 84  -----TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH-HSPEIYPGISEQRS 137
                  C   I   +I ++ Y   +       N    +   T   H  E+   + ++R+
Sbjct: 62  HFGSTPPCVNKIIDCKIAKVVYATKD-------NSLDTHGDETLRAHGIEVEC-VDDERA 113

Query: 138 RQIIQDFFKER 148
            Q+ QDFFK +
Sbjct: 114 SQLYQDFFKAK 124


>gi|220906868|ref|YP_002482179.1| CMP/dCMP deaminase [Cyanothece sp. PCC 7425]
 gi|219863479|gb|ACL43818.1| CMP/dCMP deaminase zinc-binding [Cyanothece sp. PCC 7425]
          Length = 150

 Score =  100 bits (251), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 43/138 (31%), Positives = 71/138 (51%), Gaps = 8/138 (5%)

Query: 12  LEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL---SQ 68
           LE A++A  + +  V A+ +  ++I++   N+  +  D+TAHAE++ +R     L   S 
Sbjct: 6   LELARSAIAQGKAGVAALMLWRDEILAFDHNQAVDTGDLTAHAEMVVLRQASSRLSQMSD 65

Query: 69  EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS--- 125
               E+ LYVTLEPC MC +AIS A I+R+ Y A N  G      +   T    + +   
Sbjct: 66  AEKAEITLYVTLEPCLMCLSAISFAGIKRVVYSALNRDGKPEIWISDGITTEEINETLVR 125

Query: 126 --PEIYPGISEQRSRQII 141
              E+ PG+  +  + I+
Sbjct: 126 GPLELVPGVKREEGQAIL 143


>gi|182678211|ref|YP_001832357.1| riboflavin biosynthesis protein RibD [Beijerinckia indica subsp.
           indica ATCC 9039]
 gi|182634094|gb|ACB94868.1| riboflavin biosynthesis protein RibD [Beijerinckia indica subsp.
           indica ATCC 9039]
          Length = 401

 Score =  100 bits (251), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 36/146 (24%), Positives = 54/146 (36%), Gaps = 21/146 (14%)

Query: 2   KKGNVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
           +    +M+ AL  +Q    R      VGA+ V + KI+ R   +         HAE  A+
Sbjct: 22  ETDTHYMAEALALSQQGLGRTAPNPSVGAIIVKDGKIVGRGWTQPGGR----PHAETEAL 77

Query: 60  RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113
                           LYVTLEPC        CA+AI  A + R+     +P       G
Sbjct: 78  AEAGDAA-----RGATLYVTLEPCSHFGVTPPCASAIIAAGVARVVCALEDPDPRVSGRG 132

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQ 139
            +    A       +  G+ E  +R+
Sbjct: 133 YRMLREAG----IAVTHGVLEAEARR 154


>gi|322386627|ref|ZP_08060252.1| tRNA-specific adenosine deaminase [Streptococcus cristatus ATCC
           51100]
 gi|321269300|gb|EFX52235.1| tRNA-specific adenosine deaminase [Streptococcus cristatus ATCC
           51100]
          Length = 67

 Score =  100 bits (251), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 25/65 (38%), Positives = 36/65 (55%)

Query: 85  MCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
           MC+ AI LARI ++ YGA N K G   +     T    +H  E+  G+ E+    I+Q+F
Sbjct: 1   MCSGAIGLARIPKVIYGAKNQKFGAGGSLYDILTDERLNHRVEVESGLLEEECAAIMQNF 60

Query: 145 FKERR 149
           F+ RR
Sbjct: 61  FRNRR 65


>gi|261856455|ref|YP_003263738.1| riboflavin biosynthesis protein RibD [Halothiobacillus neapolitanus
           c2]
 gi|261836924|gb|ACX96691.1| riboflavin biosynthesis protein RibD [Halothiobacillus neapolitanus
           c2]
          Length = 386

 Score =  100 bits (250), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 34/150 (22%), Positives = 56/150 (37%), Gaps = 21/150 (14%)

Query: 3   KGNVFMSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
               +M  AL  A+      +  P VG V V   +++ R  +          HAE+ A++
Sbjct: 13  DDTRWMREALALAERGLTTTQPNPRVGCVIVNAGEVVGRGFHALAGG----PHAEVFALQ 68

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
                   E       YVTLEPC        CA  ++ A +RR+    ++P       G 
Sbjct: 69  EAG-----ERAKGATAYVTLEPCAHVGRTPACAPQLADAGVRRVVTAMTDPDPRVAGEGH 123

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
                A      ++  G+ E  +R + + F
Sbjct: 124 AILRTAG----VQVESGLLEAEARWLNRGF 149


>gi|116326904|ref|YP_796624.1| cytosine/adenosine deaminase [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116332428|ref|YP_802146.1| cytosine/adenosine deaminase [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
 gi|116119648|gb|ABJ77691.1| Cytosine/adenosine deaminase [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116126117|gb|ABJ77388.1| Cytosine/adenosine deaminase [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
          Length = 155

 Score =  100 bits (250), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 39/130 (30%), Positives = 60/130 (46%), Gaps = 2/130 (1%)

Query: 20  LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVT 79
            R E+P         ++IS   N   +  D + H+EIL IR   + L    L +  L  +
Sbjct: 24  EREEVPSFTRIYQKEELISETFNEVEKHLDSSFHSEILCIRDAKKKLKTRYLTDCTLITS 83

Query: 80  LEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139
           LEPC MC   I L+RI ++ Y     +G GI +      + + +  PE+   I  + S+ 
Sbjct: 84  LEPCLMCTGTILLSRIPKIIYLLPARQGEGISS-LSIEMIYSRNFFPELIC-IPAEISKN 141

Query: 140 IIQDFFKERR 149
             + FFK RR
Sbjct: 142 AFKSFFKIRR 151


>gi|241662321|ref|YP_002980681.1| riboflavin biosynthesis protein RibD [Ralstonia pickettii 12D]
 gi|240864348|gb|ACS62009.1| riboflavin biosynthesis protein RibD [Ralstonia pickettii 12D]
          Length = 370

 Score =  100 bits (250), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 35/150 (23%), Positives = 55/150 (36%), Gaps = 20/150 (13%)

Query: 4   GNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
            +  M  AL  A+        P   VG V V ++ +I     +         HAE+ AI+
Sbjct: 6   DHAMMQRALALAEKGLFTT-TPNPRVGCVIVRDDTVIGEGYTQPAGQD----HAEVQAIK 60

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
                   + +     YVTLEPC        CA  +  A I R+     +P       G 
Sbjct: 61  DA--QSRGQDVRGATAYVTLEPCSHFGRTPPCADRLVEAGIARVVAAMEDPNPAVSGRGL 118

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
           Q    A      ++  G+ E+ +R++   F
Sbjct: 119 QKLRDAG----VDVRCGLLEREARELNIGF 144


>gi|187925073|ref|YP_001896715.1| riboflavin biosynthesis protein RibD [Burkholderia phytofirmans
           PsJN]
 gi|187716267|gb|ACD17491.1| riboflavin biosynthesis protein RibD [Burkholderia phytofirmans
           PsJN]
          Length = 383

 Score =  100 bits (250), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 36/151 (23%), Positives = 54/151 (35%), Gaps = 18/151 (11%)

Query: 2   KKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
           +   V M  AL  A+      +  P VG V V N ++I     +         HAEI A+
Sbjct: 4   QTDFVHMERALALAKRGMYTTDPNPRVGCVLVKNGEVIGEGFTQPAGQD----HAEIRAL 59

Query: 60  RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113
           +          L     YVTLEPC        CA A+  A++ R+     +P       G
Sbjct: 60  KDA--RSRGHDLRGATAYVTLEPCSHFGRTPPCANALIEAQVARVVAAMEDPNPQVSGRG 117

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
                 A      E+  G+    + ++   F
Sbjct: 118 LAMLRDAG----IEVRCGLLAHEAHELNIGF 144


>gi|320167576|gb|EFW44475.1| tRNA-specific adenosine deaminase-like protein 3 [Capsaspora
           owczarzaki ATCC 30864]
          Length = 418

 Score =  100 bits (250), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 38/151 (25%), Positives = 63/151 (41%), Gaps = 33/151 (21%)

Query: 22  NEIPVGAVAVLN--NKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEIL-------- 71
              P+GAV V    N I++  G+ +RE     AHA ++AI        QE L        
Sbjct: 263 GNSPIGAVVVDPATNTILASVGDCSREHT--LAHAAMVAIARVADAQRQEYLAALQQGEN 320

Query: 72  ---------------------PEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI 110
                                   DLY+T EPC MC+ A+  +R+ R+++G  +P  GG+
Sbjct: 321 GAPASAEAGNSRPVAELPYLCTSYDLYITREPCVMCSMALVHSRVGRVFFGTPHPDMGGL 380

Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQII 141
               + +     +H    + G++E+R   + 
Sbjct: 381 AGARRIHAEPKLNHHFLAFRGVAERRCAALF 411


>gi|228916001|ref|ZP_04079574.1| Riboflavin biosynthesis protein [Bacillus thuringiensis serovar
           pulsiensis BGSC 4CC1]
 gi|228843596|gb|EEM88672.1| Riboflavin biosynthesis protein [Bacillus thuringiensis serovar
           pulsiensis BGSC 4CC1]
          Length = 350

 Score =  100 bits (250), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 37/125 (29%), Positives = 55/125 (44%), Gaps = 19/125 (15%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85
           VG+V V +N+I+    +          HAEI AIRM       E      +YVTLEPC+ 
Sbjct: 11  VGSVIVNDNRIVGIGAHMKAGE----PHAEIHAIRMAG-----EQARGGTIYVTLEPCSH 61

Query: 86  ------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139
                 CA AI  A I+++     +P       G Q    A      E+  G+ E+ S++
Sbjct: 62  HGRTGPCAEAIVQAGIKKVVVATLDPNPLVSGRGIQILQDAG----IEVLVGVCEEESKK 117

Query: 140 IIQDF 144
           + + F
Sbjct: 118 MNEVF 122


>gi|163789730|ref|ZP_02184167.1| Riboflavin biosynthesis protein RIBD (pirimidine deaminase and
           pirimidine reductase) [Carnobacterium sp. AT7]
 gi|159874952|gb|EDP69019.1| Riboflavin biosynthesis protein RIBD (pirimidine deaminase and
           pirimidine reductase) [Carnobacterium sp. AT7]
          Length = 351

 Score =  100 bits (250), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 31/127 (24%), Positives = 53/127 (41%), Gaps = 19/127 (14%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC-- 83
           VGA+ V   ++I +  ++         HAE+ AI        +E +    LYVTLEPC  
Sbjct: 15  VGAIIVKGGRVIGQGYHQKYGQ----PHAEVNAIASA-----KEDVTGATLYVTLEPCSH 65

Query: 84  ----TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139
                 C+  +    I+R+  G  +P       G +           E+  G+ E+ S++
Sbjct: 66  FGKTPPCSDLLIDKNIKRVVVGTLDPNPLVAGKGIERLRSNG----IEVVTGVLEEESQK 121

Query: 140 IIQDFFK 146
           + + F K
Sbjct: 122 LNEIFIK 128


>gi|46199007|ref|YP_004674.1| diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino) uracil
           reductase [Thermus thermophilus HB27]
 gi|46196631|gb|AAS81047.1| diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino) uracil
           reductase [Thermus thermophilus HB27]
          Length = 377

 Score =  100 bits (250), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 35/155 (22%), Positives = 55/155 (35%), Gaps = 23/155 (14%)

Query: 1   MKK-GNVFMSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57
           M+     F+  AL+ A+ A       P VGAV V   +I+    +          HAE+ 
Sbjct: 1   MRDLDERFLRRALQLAERARGHTSPNPLVGAVLVREGRIVGEGFHPRAGE----PHAEVF 56

Query: 58  AIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIE 111
           A+R    +           YVTLEPC        C+ A+  A + R+   A         
Sbjct: 57  ALREAGELA-----RGATAYVTLEPCDHFGRTPPCSLALLQAGVSRVVVAAREENPVAKG 111

Query: 112 NGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
              +           ++  G+ E  +R   + FF 
Sbjct: 112 GLERLRVG-----GVQVEAGLLEAEARAQNEVFFA 141


>gi|304312168|ref|YP_003811766.1| Riboflavin biosynthesis bifunctional RIBD:
           diaminohydroxyphosphoribosylaminopyrimid ine deaminase +
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           oxidoreductase protein [gamma proteobacterium HdN1]
 gi|301797901|emb|CBL46123.1| Riboflavin biosynthesis bifunctional RIBD:
           diaminohydroxyphosphoribosylaminopyrimid ine deaminase +
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           oxidoreductase protein [gamma proteobacterium HdN1]
          Length = 389

 Score =  100 bits (250), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 39/154 (25%), Positives = 55/154 (35%), Gaps = 21/154 (13%)

Query: 4   GNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
            +  MS AL+ A            VG V V N  I+    ++         HAE+LA+  
Sbjct: 10  DHQMMSRALQLAPRGLYTTHPNPRVGCVIVQNGAIVGEGWHQLAGQG----HAEVLALEQ 65

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
                  E       YVTLEPC        CA A+  A I R+    S+P       G  
Sbjct: 66  AG-----ERAKGATAYVTLEPCAHYGRTPPCANALIKAGIARVVGAMSDPNPRVSGGGYG 120

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
               A      +   G+ +Q++  +   F K  R
Sbjct: 121 LLRAAG----IKTDNGLLKQQAEALNPGFIKRMR 150


>gi|114777001|ref|ZP_01452021.1| RibD [Mariprofundus ferrooxydans PV-1]
 gi|114552522|gb|EAU54982.1| RibD [Mariprofundus ferrooxydans PV-1]
          Length = 379

 Score =  100 bits (250), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 36/157 (22%), Positives = 59/157 (37%), Gaps = 24/157 (15%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
            +    M  A+E AQ        P   VGAV V   +++    ++         HAE +A
Sbjct: 23  TQHEALMLQAIELAQRGGGTT-HPNPRVGAVVVNRGEVVGVGWHKRAGG----PHAEAVA 77

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
           +++  +           LYVTLEPC        C  AI  A I+ + Y + +P       
Sbjct: 78  LQVAGK-----RARGGTLYVTLEPCSAHGRTPACTEAIRRAGIKHVVYASPDPNPQMSG- 131

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
           G +    A       +  G+  +++  +   FF   R
Sbjct: 132 GHKILEAAG----ISVTAGVLREQAEALNIPFFHYLR 164


>gi|298715154|emb|CBJ27842.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 364

 Score =  100 bits (250), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 44/206 (21%), Positives = 74/206 (35%), Gaps = 69/206 (33%)

Query: 7   FMSCALEEAQNAALR-NEIP-VGAVAVLN--------NKIISRAGNRNRELKD------- 49
           FM  AL +A+    +    P VGAV V           ++++ A    ++++D       
Sbjct: 149 FMRDALVDAETGRQQNGGRPTVGAVLVDPLGGCGGRRGRVVATASRERQKVRDEEPASMR 208

Query: 50  --VTAHAEILAI----------------------RMGCRILSQEI--------------- 70
                HA +L +                            L +E                
Sbjct: 209 DHPLHHAVMLCVQGVGRALAAGSRQEKVARKQEEDSAGGKLGKEREGKGSESLCSDADPP 268

Query: 71  -------------LPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFY 117
                            DLYVT EPC MCA A+  +R+RR+ YG  + + G + + T  +
Sbjct: 269 GGVVEVLSPEQYLCTGFDLYVTREPCLMCAMALVHSRVRRVIYGVRDTERGCLGSVTMLH 328

Query: 118 TLATCHHSPEIYPGISEQRSRQIIQD 143
           TL + +H+  ++ G+     RQ + D
Sbjct: 329 TLTSLNHNYRVFEGVCADECRQSLSD 354


>gi|89073130|ref|ZP_01159669.1| Putative pyrimidine deaminase/pyrimidine reductase [Photobacterium
           sp. SKA34]
 gi|89051083|gb|EAR56540.1| Putative pyrimidine deaminase/pyrimidine reductase [Photobacterium
           sp. SKA34]
          Length = 374

 Score =  100 bits (250), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 31/152 (20%), Positives = 56/152 (36%), Gaps = 21/152 (13%)

Query: 4   GNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
               M  A++ A+         P VG V  + ++I+    +          HAE+ A++ 
Sbjct: 6   DTRLMLRAIQLAKRGCFTTAPNPNVGCVIAIGDEILGEGFHYRAGE----PHAEVFALKQ 61

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
                          YVTLEPC        CA A+  + I R+     +P       G +
Sbjct: 62  AG-----TRAKGATAYVTLEPCSHYGRTPPCAEALIKSGISRVICAMVDPNPLVAGRGVE 116

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
               A      ++  G+ ++ ++ I + F K+
Sbjct: 117 MLQKAG----VDVQVGLLKEEAQAINKAFIKQ 144


>gi|323337097|gb|EGA78353.1| Tad2p [Saccharomyces cerevisiae Vin13]
          Length = 213

 Score =  100 bits (250), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 28/119 (23%), Positives = 51/119 (42%), Gaps = 11/119 (9%)

Query: 38  SRAGNRNRELKDVTAHAEILAIRMGCRILSQ----EILPEVDLYVTLEPCTMCAAAISLA 93
           +   N   +     AHAE + I     +L      ++  ++ LYVT+EPC MCA+A+   
Sbjct: 2   AYGMNDTNKSLTGVAHAEFMGIDQIKAMLGSRGVVDVFKDITLYVTVEPCIMCASALKQL 61

Query: 94  RIRRLYYGASNPKGGGIENGTQFYTL-----ATCHHS--PEIYPGISEQRSRQIIQDFF 145
            I ++ +G  N + GG                  + +   E  PGI  + +  +++ F+
Sbjct: 62  GIGKVVFGCGNERFGGNGTVLSVNHDTCTLVPKNNSAAGYESIPGILRKEAIMLLRYFY 120


>gi|33240788|ref|NP_875730.1| pyrimidine reductase [Prochlorococcus marinus subsp. marinus str.
           CCMP1375]
 gi|33238317|gb|AAQ00383.1| Pyrimidine reductase [Prochlorococcus marinus subsp. marinus str.
           CCMP1375]
          Length = 367

 Score =  100 bits (250), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 37/154 (24%), Positives = 57/154 (37%), Gaps = 23/154 (14%)

Query: 5   NVFMSCALEEAQNAALRNEI-P-VGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRM 61
             +M  A+  A  A  +    P VGAV +   N+++    +          HAEI AI  
Sbjct: 11  EPWMFRAINLASLAEGQTSPNPLVGAVILDEKNRLVGEGFHLRSGE----PHAEIGAIEQ 66

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
              +          L V LEPC        C  AI  + I+R+     +P       G  
Sbjct: 67  AGSLA-----KGGTLLVNLEPCCHRGKTPPCTDAILRSGIKRVVVAIQDPDQRVSGKGIA 121

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDF-FKER 148
           F   +      E+  GI E+ +  + + F F+ R
Sbjct: 122 FLKESG----IEVVTGILEKEAAFLNRAFIFRNR 151


>gi|114331089|ref|YP_747311.1| riboflavin biosynthesis protein RibD [Nitrosomonas eutropha C91]
 gi|114308103|gb|ABI59346.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase /
           diaminohydroxyphosphoribosylaminopyrimidine deaminase
           [Nitrosomonas eutropha C91]
          Length = 367

 Score =  100 bits (250), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 35/150 (23%), Positives = 56/150 (37%), Gaps = 21/150 (14%)

Query: 3   KGNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
              + MS AL+ A+           VG V V + K++    +         +HAEI A+R
Sbjct: 9   SDYMHMSHALQLAERGLFTTSPNPRVGCVIVNDGKVVGTGWHERVGE----SHAEINALR 64

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
               +          +YVTLEPC        C  A+  A + R+     +P       G 
Sbjct: 65  EAGDLA-----RGATVYVTLEPCSHHGRTPPCVEALICAEVCRVIMAMDDPNPHVNGQGK 119

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
           +    A      E+  G+ E  ++Q+   F
Sbjct: 120 EKLQKAG----VEVQTGLLEDEAQQLNIGF 145


>gi|19923945|ref|NP_612431.1| tRNA-specific adenosine deaminase-like protein 3 [Homo sapiens]
 gi|74731634|sp|Q96EY9|ADAT3_HUMAN RecName: Full=tRNA-specific adenosine deaminase-like protein 3;
           AltName: Full=tRNA-specific adenosine-34 deaminase
           subunit ADAT3
 gi|15080093|gb|AAH11824.1| Adenosine deaminase, tRNA-specific 3, TAD3 homolog (S. cerevisiae)
           [Homo sapiens]
          Length = 351

 Score =  100 bits (250), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 33/155 (21%), Positives = 62/155 (40%), Gaps = 42/155 (27%)

Query: 26  VGAVAVLN--NKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQ--------------- 68
           VGAV V    +++++   + +    +   HA ++ + +  R   +               
Sbjct: 195 VGAVVVDPASDRVLATGHDCSCAD-NPLLHAVMVCVDLVARGQGRGTYDFRPFPACSFAP 253

Query: 69  -----------------------EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNP 105
                                   +    DLYVT EPC MCA A+  ARI R++YGA +P
Sbjct: 254 AAAPQAVRAGAVRKLDADEDGLPYLCTGYDLYVTREPCAMCAMALVHARILRVFYGAPSP 313

Query: 106 KGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140
             G +    + +     +H  +++ G+ E++ R +
Sbjct: 314 D-GALGTRFRIHARPDLNHRFQVFRGVLEEQCRWL 347


>gi|188589601|ref|YP_001920640.1| riboflavin biosynthesis protein RibD [Clostridium botulinum E3 str.
           Alaska E43]
 gi|188499882|gb|ACD53018.1| riboflavin biosynthesis protein RibD [Clostridium botulinum E3 str.
           Alaska E43]
          Length = 366

 Score =  100 bits (250), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 38/153 (24%), Positives = 62/153 (40%), Gaps = 25/153 (16%)

Query: 4   GNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
              +M  ALE A+      ++   P VGA+ V +N+II    +         AHAE+ AI
Sbjct: 5   NEKYMELALELAKKG--EGKVNPNPLVGALIVKDNEIIGSGYHEKYGE----AHAEVNAI 58

Query: 60  RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113
                    + L    +YVTLEPC        C   I   +I+++  G  +P        
Sbjct: 59  NNA-----TKSLDGSTIYVTLEPCSHYGKTPPCVDLIIEKKIKKVIIGMLDPNPMVSGRS 113

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
            +           E+  G+ E++ ++I + F K
Sbjct: 114 IKKLKDND----IEVIVGVEEEKCKKINESFIK 142


>gi|119589840|gb|EAW69434.1| hCG22695, isoform CRA_a [Homo sapiens]
 gi|119589842|gb|EAW69436.1| hCG22695, isoform CRA_a [Homo sapiens]
 gi|119589844|gb|EAW69438.1| hCG22695, isoform CRA_a [Homo sapiens]
          Length = 367

 Score =  100 bits (250), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 33/155 (21%), Positives = 62/155 (40%), Gaps = 42/155 (27%)

Query: 26  VGAVAVLN--NKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQ--------------- 68
           VGAV V    +++++   + +    +   HA ++ + +  R   +               
Sbjct: 211 VGAVVVDPASDRVLATGHDCSCAD-NPLLHAVMVCVDLVARGQGRGTYDFRPFPACSFAP 269

Query: 69  -----------------------EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNP 105
                                   +    DLYVT EPC MCA A+  ARI R++YGA +P
Sbjct: 270 AAAPQAVRAGAVRKLDADEDGLPYLCTGYDLYVTREPCAMCAMALVHARILRVFYGAPSP 329

Query: 106 KGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140
             G +    + +     +H  +++ G+ E++ R +
Sbjct: 330 D-GALGTRFRIHARPDLNHRFQVFRGVLEEQCRWL 363


>gi|167565784|ref|ZP_02358700.1| riboflavin biosynthesis protein RibD [Burkholderia oklahomensis
           EO147]
          Length = 357

 Score =  100 bits (250), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 36/148 (24%), Positives = 54/148 (36%), Gaps = 21/148 (14%)

Query: 8   MSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M+ AL  A+      R    VG V   + +++    +R         HAE+ A+R     
Sbjct: 1   MAHALRLAEQGLYTTRPNPRVGCVIAHDEQVLGTGWHRRAGE----PHAEVHALREAG-- 54

Query: 66  LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
              E       YVTLEPC        CA A+  A + R+   A +P       G      
Sbjct: 55  ---ERARGATAYVTLEPCAHYGRTPPCANALVAAGVARVVIAARDPFEQVAGRGAARLAD 111

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKE 147
           A       +  G+ E  +R++   FF  
Sbjct: 112 AG----IVVEQGLMEAEARELNIGFFSR 135


>gi|257413677|ref|ZP_04743810.2| riboflavin biosynthesis protein RibD [Roseburia intestinalis L1-82]
 gi|257202725|gb|EEV01010.1| riboflavin biosynthesis protein RibD [Roseburia intestinalis L1-82]
          Length = 173

 Score =  100 bits (250), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 36/153 (23%), Positives = 57/153 (37%), Gaps = 19/153 (12%)

Query: 1   MKKGNVFMSCALEEAQ--NAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           M++   +M  A+E A+      +    VGAV V  ++II    ++         HAE  A
Sbjct: 31  MQQ-ERYMRRAMELAELGRGWTKTNPVVGAVLVKEDRIIGEGYHKKFGGL----HAEREA 85

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
           +         E     DLYVTLEPC        C  A+  A I  ++ GA +        
Sbjct: 86  L--ADCRSRGEDPAGADLYVTLEPCCHYGKTPPCTQAVIEAGISHVFVGAEDINPLVAGA 143

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
           G +            +  G+ ++      + FF
Sbjct: 144 GIRQLREQGIL----VTEGVLQEECEYQNRVFF 172


>gi|22299695|ref|NP_682942.1| riboflavin biosynthesis protein [Thermosynechococcus elongatus
           BP-1]
 gi|22295879|dbj|BAC09704.1| riboflavin biosynthesis protein [Thermosynechococcus elongatus
           BP-1]
          Length = 379

 Score =  100 bits (250), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 38/150 (25%), Positives = 57/150 (38%), Gaps = 19/150 (12%)

Query: 4   GNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
              +M   LE A  A  R   P   VG V V   ++I    +          HAE+ A+R
Sbjct: 14  DAQYMGRCLELAARAKGRT-APNPLVGCVIVAEGRVIGEGFHPKAGE----PHAEVFALR 68

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
                  + +L +  LYV LEPC        C  AI  A I ++  G  +P       G 
Sbjct: 69  SVSES-DRPLLSKATLYVNLEPCNHYGRTPPCTEAILAAGIPKVVVGMIDPNPQVAGAGV 127

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
           +    A      E+  G+ E   +++ + F
Sbjct: 128 ERLRSAG----IEVTVGVREADCQRLNEAF 153


>gi|299771887|ref|YP_003733913.1| pyrimidine deaminase [Acinetobacter sp. DR1]
 gi|298701975|gb|ADI92540.1| pyrimidine deaminase [Acinetobacter sp. DR1]
          Length = 361

 Score =  100 bits (250), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 38/155 (24%), Positives = 62/155 (40%), Gaps = 21/155 (13%)

Query: 1   MKKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           +K+   +M  A+E A+         P VG V V ++++I    +     K    HAE+ A
Sbjct: 4   LKQDQYWMQQAIELAKRGLYSTKPNPNVGCVIVKDDQLIGEGFH----PKAGQPHAEVFA 59

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
           +R                YVTLEPC        CA A+  A+++++     +P       
Sbjct: 60  LRQAAEQAQ-----GATAYVTLEPCAHYGRTPPCAEALVKAQVKKVVVACPDPNPLVAGK 114

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
           G Q       +   E+  GI E  + ++ Q F K 
Sbjct: 115 GVQILK----NAGIEVEVGICENLAEKLNQGFLKA 145


>gi|307730708|ref|YP_003907932.1| riboflavin biosynthesis protein RibD [Burkholderia sp. CCGE1003]
 gi|307585243|gb|ADN58641.1| riboflavin biosynthesis protein RibD [Burkholderia sp. CCGE1003]
          Length = 384

 Score =  100 bits (250), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 36/151 (23%), Positives = 55/151 (36%), Gaps = 18/151 (11%)

Query: 2   KKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
           +   V M  AL  A+      +  P VG V V N ++I     +         HAEI A+
Sbjct: 4   QTDFVHMERALALARRGMYTTDPNPRVGCVIVQNGEVIGEGFTQPAGQD----HAEIRAM 59

Query: 60  RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113
           +          L     YVTLEPC        CA+A+  A++ R+     +P       G
Sbjct: 60  KDA--RSRGHDLRGATAYVTLEPCSHFGRTPPCASALIEAQVGRVVAAMEDPNPQVSGRG 117

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
                 A      E+  G+    + ++   F
Sbjct: 118 LAMLRDAG----IEVRCGLLANEAHELNIGF 144


>gi|16272881|ref|NP_439104.1| riboflavin biosynthesis protein [Haemophilus influenzae Rd KW20]
 gi|260580033|ref|ZP_05847863.1| riboflavin biosynthesis protein RibD [Haemophilus influenzae RdAW]
 gi|1172932|sp|P44326|RIBD_HAEIN RecName: Full=Riboflavin biosynthesis protein RibD; Includes:
           RecName:
           Full=Diaminohydroxyphosphoribosylaminopyrimidine
           deaminase; Short=DRAP deaminase; AltName:
           Full=Riboflavin-specific deaminase; Includes: RecName:
           Full=5-amino-6-(5-phosphoribosylamino)uracil reductase;
           AltName: Full=HTP reductase
 gi|1573964|gb|AAC22598.1| riboflavin biosynthesis protein (ribD) [Haemophilus influenzae Rd
           KW20]
 gi|260093317|gb|EEW77250.1| riboflavin biosynthesis protein RibD [Haemophilus influenzae RdAW]
          Length = 372

 Score =   99 bits (249), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 36/156 (23%), Positives = 56/156 (35%), Gaps = 21/156 (13%)

Query: 2   KKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
            +  VFM  AL+ A          P VG V V N +I+    +   +      HAE +A+
Sbjct: 6   SQDCVFMQRALDLAAKGQYTTTPNPSVGCVLVKNGEIVGEGFH--FKAGQP--HAERVAL 61

Query: 60  RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113
                    E       YVTLEPC        CA  +  A + ++     +P       G
Sbjct: 62  AQAG-----ENAKGATAYVTLEPCAHYGRTPPCALGLIEAGVVKVIAAMQDPNPQVAGKG 116

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +  + A      E    +   ++ +I + F K  R
Sbjct: 117 LKMLSDAG----IESTVNLLNDQAEKINKGFLKRMR 148


>gi|295112158|emb|CBL28908.1| riboflavin biosynthesis protein RibD [Synergistetes bacterium SGP1]
          Length = 371

 Score =   99 bits (249), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 34/151 (22%), Positives = 56/151 (37%), Gaps = 18/151 (11%)

Query: 4   GNVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
              +M  AL  A     R      VG V V + +I+    +R         HAE+ A++ 
Sbjct: 11  DEYYMRRALSLALRGMGRTSPNPMVGCVLVRDGRILGEGWHRRCGED----HAEVAALKD 66

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
             R          ++YVTLEPC        CA  +    + R+  G ++P       G  
Sbjct: 67  AERRGETAR--GAEVYVTLEPCCHFGRTPPCAQRLVREGVSRVVAGTADPNPRVNSGGLA 124

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
               A      E+     E+ +R++ + F +
Sbjct: 125 VLREAG----VEVSAPCLEEEARRVNKGFIR 151


>gi|300087628|ref|YP_003758150.1| riboflavin biosynthesis protein RibD [Dehalogenimonas
           lykanthroporepellens BL-DC-9]
 gi|299527361|gb|ADJ25829.1| riboflavin biosynthesis protein RibD [Dehalogenimonas
           lykanthroporepellens BL-DC-9]
          Length = 362

 Score =   99 bits (249), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 36/149 (24%), Positives = 61/149 (40%), Gaps = 25/149 (16%)

Query: 8   MSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
           M  AL+ A       E+   P VGAV V +++I+ +   +    +    HAE++A+    
Sbjct: 1   MQQALKLA--GLALGEVSPNPAVGAVVVKDDEIVGQGYTQPPGQE----HAEVMALNQAG 54

Query: 64  RILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFY 117
                       +YVTLEPC        C  AI  A I+ +++   +        G    
Sbjct: 55  ARSQ-----GAVMYVTLEPCAHQGRTPPCTDAIIAAGIKEVHFATLDDNPVVFGKGKAAL 109

Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDFFK 146
           T A      E++ G     +R++ + +FK
Sbjct: 110 TAAG----IEVHVGEHRDAARELNEAYFK 134


>gi|257462874|ref|ZP_05627280.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Fusobacterium
           sp. D12]
 gi|317060498|ref|ZP_07924983.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase
           [Fusobacterium sp. D12]
 gi|313686174|gb|EFS23009.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase
           [Fusobacterium sp. D12]
          Length = 359

 Score =   99 bits (249), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 38/156 (24%), Positives = 60/156 (38%), Gaps = 26/156 (16%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56
           M+    +M  AL+ A+      ++   P VGAV V N  II +  +          HAE+
Sbjct: 1   MEAQE-YMHFALKLAKKG--EGKVNPNPLVGAVVVKNGNIIGQGYHHQYGG----PHAEV 53

Query: 57  LAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGI 110
            A++            +  +YVTLEPC        CA  I  + I+R      +P     
Sbjct: 54  YALQEAG-----TEAKDATIYVTLEPCSHYGKTPPCAKKIIDSGIKRCIIAMEDPNPLVA 108

Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
             G      A      ++  G+ E  +R + + F K
Sbjct: 109 GKGIAMMKEAG----IQVEVGLCETEARVLNRVFLK 140


>gi|326203162|ref|ZP_08193028.1| CMP/dCMP deaminase zinc-binding [Clostridium papyrosolvens DSM
           2782]
 gi|325986808|gb|EGD47638.1| CMP/dCMP deaminase zinc-binding [Clostridium papyrosolvens DSM
           2782]
          Length = 137

 Score =   99 bits (249), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 33/84 (39%), Positives = 42/84 (50%), Gaps = 1/84 (1%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILP-EVDLYVTLEPCT 84
             AV      I+S+     R+  D TAHAEI AIR  C+ L  ++LP    LY T EPC 
Sbjct: 15  FAAVIDAEGNIVSKGKTTVRDDHDPTAHAEINAIRSACKRLKVDVLPKGYWLYSTFEPCP 74

Query: 85  MCAAAISLARIRRLYYGASNPKGG 108
           +CAAAI  A    + Y  +    G
Sbjct: 75  LCAAAIIWAGFEGVVYANNADHRG 98


>gi|317052209|ref|YP_004113325.1| riboflavin biosynthesis protein RibD [Desulfurispirillum indicum
           S5]
 gi|316947293|gb|ADU66769.1| riboflavin biosynthesis protein RibD [Desulfurispirillum indicum
           S5]
          Length = 377

 Score =   99 bits (249), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 37/147 (25%), Positives = 55/147 (37%), Gaps = 24/147 (16%)

Query: 8   MSCALEEAQNAA---LRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGC 63
           M  AL  A+        N + VG+V V     I+    +    +    AHAE++A++   
Sbjct: 11  MQMALNLARKGLGFTSPNPV-VGSVIVDAAGAIVGMGYHAKAGM----AHAEVVALKDAG 65

Query: 64  RILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFY 117
                       LYVTLEPC        C  AI  A I+++ Y A +P            
Sbjct: 66  EKA-----RGATLYVTLEPCCVQGRTPPCTDAIIRAGIQKVVYAAQDPNPAVAGRSRAIL 120

Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDF 144
             A       +  GI E  +R + + F
Sbjct: 121 EAAG----IAVESGILEPEARYLNRHF 143


>gi|327179698|gb|AEA30246.1| putative cytosine/adenosine deaminase [Streptomyces sp. Acta 2897]
          Length = 159

 Score =   99 bits (249), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 27/94 (28%), Positives = 42/94 (44%)

Query: 10  CALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQE 69
            A+  ++    +  IP   V V + +I+    NR RE  D TAHAE++A+R         
Sbjct: 14  EAVRISREHVAQGGIPFSGVVVGSGRILGTGFNRVREDNDPTAHAEVVALREATTKYGIH 73

Query: 70  ILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
            +    L  + EPC +C  A   A I  + + A 
Sbjct: 74  AVAGATLIASGEPCALCYLAARYAGIGHIVHAAD 107


>gi|325109372|ref|YP_004270440.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase;
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Planctomyces brasiliensis DSM 5305]
 gi|324969640|gb|ADY60418.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase;
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Planctomyces brasiliensis DSM 5305]
          Length = 377

 Score =   99 bits (249), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 37/146 (25%), Positives = 63/146 (43%), Gaps = 22/146 (15%)

Query: 8   MSCALEEAQNAALRNEI-P-VGAVAVLNN-KIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           M  ALE A+      E  P VGAV V  N ++I+   +   +      HAE+ A+R    
Sbjct: 12  MQRALELARQGEGFVEPNPCVGAVVVDENLQLIAEGYH--EQYGGP--HAEVQALRNAG- 66

Query: 65  ILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
               +      ++VTLEPC        C+ A+  A I R++ G  +P       G +   
Sbjct: 67  ----DRARGAWIFVTLEPCNHHGKTPPCSEAVIQAGIERVFIGCLDPAAHEKRQGAERLR 122

Query: 119 LATCHHSPEIYPGISEQRSRQIIQDF 144
            A      ++  G+ +Q + ++++ F
Sbjct: 123 EAGL----QVEVGLCQQEAERLLRPF 144


>gi|126178774|ref|YP_001046739.1| cytosine deaminase [Methanoculleus marisnigri JR1]
 gi|125861568|gb|ABN56757.1| Cytosine deaminase [Methanoculleus marisnigri JR1]
          Length = 140

 Score =   99 bits (249), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 43/141 (30%), Positives = 61/141 (43%), Gaps = 12/141 (8%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           M CA+EEA+       IP+G+V V + +II R  NR  +  D   HAEI  +R   RI S
Sbjct: 1   MKCAVEEAEAGLREGGIPIGSVLVRDGRIIGRGRNRRVQNDDPVLHAEIDCLRNAGRIGS 60

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
                E  LY TL PC +CA A     I ++  G S    G  E            H  E
Sbjct: 61  ---YAECTLYSTLMPCYLCAGAAVQFGIGKVVAGESVNFAGAREFLES--------HGVE 109

Query: 128 IYPGISEQRSRQIIQDFFKER 148
           +   +     + ++  F ++ 
Sbjct: 110 VLD-LDLDVCKAMMGTFIEQH 129


>gi|326793664|ref|YP_004311484.1| CMP/dCMP deaminase zinc-binding protein [Marinomonas mediterranea
           MMB-1]
 gi|326544428|gb|ADZ89648.1| CMP/dCMP deaminase zinc-binding protein [Marinomonas mediterranea
           MMB-1]
          Length = 162

 Score =   99 bits (249), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 28/147 (19%), Positives = 52/147 (35%), Gaps = 10/147 (6%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMG 62
               +      A++A  +   P  A+   +  +I+    N      D+T HAE   +   
Sbjct: 11  DTQLLKKTFRLAEDAKQKGIHPFAAILADDQGQILMDQINGYLPDLDMTGHAERKLMTRA 70

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENG------TQF 116
            +    + L +  LY++ EPC MCA +   A + R+ YG S  +   I            
Sbjct: 71  SKAYRPDFLAKCTLYISAEPCAMCAGSAYWAGVGRVVYGLSEARLKRITGNHPENPTLDL 130

Query: 117 YTLATCH---HSPEIYPGISEQRSRQI 140
                 +      E+     E  + ++
Sbjct: 131 PCRTVFNSGQRDVEVLGPCLEDEAAKL 157


>gi|33519699|ref|NP_878531.1| bifunctional pyrimidine deaminase/reductase in pathway of
           riboflavin synthesis [Candidatus Blochmannia floridanus]
 gi|33517362|emb|CAD83747.1| bifunctional pyrimidine deaminase/reductase in pathway of
           riboflavin synthesis [Candidatus Blochmannia floridanus]
          Length = 378

 Score =   99 bits (249), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 33/157 (21%), Positives = 55/157 (35%), Gaps = 23/157 (14%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
               +++S A   A+       +P   VG V V  NK+I    +          HAEI A
Sbjct: 8   DNDLIYLSRAFRLARKGRFTT-MPNPNVGCVIVKENKVIGEGYHIRAGED----HAEIHA 62

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
           +R+       +      +YVTLEPC        C  A+  + I+ +     +P       
Sbjct: 63  LRIAG-----DSARGATVYVTLEPCSHYGRTPPCTTALINSGIKCVVISMLDPDPEIKGR 117

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
           G +    +       +   +    +  I + F K  R
Sbjct: 118 GVRLLQESGIL----VRHSLMLSEAEHINKGFIKRIR 150


>gi|229110810|ref|ZP_04240373.1| Riboflavin biosynthesis protein [Bacillus cereus Rock1-15]
 gi|228672689|gb|EEL27970.1| Riboflavin biosynthesis protein [Bacillus cereus Rock1-15]
          Length = 348

 Score =   99 bits (249), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 36/125 (28%), Positives = 56/125 (44%), Gaps = 19/125 (15%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85
           VG+V V +N+I+    +          HAEI AIRM       E +    +YVTLEPC+ 
Sbjct: 11  VGSVIVNDNRIVGVGAHMKAGE----PHAEIHAIRMAG-----EQVRGATIYVTLEPCSH 61

Query: 86  ------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139
                 CA AI  A I+++     +P       G +    A      E+  G+ E+ S++
Sbjct: 62  HGRTGPCAEAIVQAGIKKVVVATLDPNPLVSGRGIKILQDAG----IEVLVGVCEEESKK 117

Query: 140 IIQDF 144
           + + F
Sbjct: 118 VNEVF 122


>gi|331656468|ref|ZP_08357430.1| riboflavin biosynthesis protein RibD [Escherichia coli TA206]
 gi|315299580|gb|EFU58828.1| riboflavin biosynthesis protein RibD [Escherichia coli MS 16-3]
 gi|331054716|gb|EGI26725.1| riboflavin biosynthesis protein RibD [Escherichia coli TA206]
          Length = 367

 Score =   99 bits (249), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 36/155 (23%), Positives = 59/155 (38%), Gaps = 21/155 (13%)

Query: 3   KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +   +M+ AL+ AQ      +  P VG V V + +I+    ++         HAE+ A+R
Sbjct: 2   QDEYYMARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGE----PHAEVHALR 57

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           M              +YVTLEPC        C  A+  A + R+     +P       G 
Sbjct: 58  MAGEKA-----KGATVYVTLEPCSHHGRTPPCCDALIAAGVARVVAAMQDPNPQVAGRGL 112

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
                A      ++  G+    + Q+ + F K  R
Sbjct: 113 YRLQQAG----IDVSHGLMMSEAEQLNKGFLKRMR 143


>gi|295698401|ref|YP_003603056.1| riboflavin biosynthesis protein RibD [Candidatus Riesia
           pediculicola USDA]
 gi|291157057|gb|ADD79502.1| riboflavin biosynthesis protein RibD [Candidatus Riesia
           pediculicola USDA]
          Length = 373

 Score =   99 bits (249), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 38/154 (24%), Positives = 63/154 (40%), Gaps = 21/154 (13%)

Query: 2   KKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
            K   FMS A+  A+      +  P VG V V NN+I+  + +         +HAE+LA+
Sbjct: 3   DKDRQFMSRAIFLAKKGKFTTSPNPNVGCVIVQNNRIVGESYHSKTGE----SHAEVLAM 58

Query: 60  RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113
           +          L    +YVTLEPC        C   +  A+I +++   ++P      +G
Sbjct: 59  KKAGHF-----LKGATVYVTLEPCNHYGLTPPCVDELINAKISKIFVSMTDPNPKV--SG 111

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
                L       ++  G+ +  S +I   F K 
Sbjct: 112 KSLIKLKKS--GVQVISGLLKDESEKINLGFIKR 143


>gi|319795221|ref|YP_004156861.1| cmp/dcmp deaminase zinc-binding protein [Variovorax paradoxus EPS]
 gi|315597684|gb|ADU38750.1| CMP/dCMP deaminase zinc-binding protein [Variovorax paradoxus EPS]
          Length = 158

 Score = 99.6 bits (248), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 39/163 (23%), Positives = 57/163 (34%), Gaps = 20/163 (12%)

Query: 1   MKKGNVF--MSCALEEAQNAALRNEIPVGAVAVLNNK--IISRAGNRNRELKDVTAHAEI 56
           M +  +   +  A E A+ A      P GAV V  +   I++  GN      D   HAE 
Sbjct: 1   MNQDQIIRALRRADEVARRAMAMGRHPFGAVLVAPDGETILAEQGN-----IDTVNHAEA 55

Query: 57  LAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIE----- 111
              R   +    E L +  L  T EPC MCA     A I R+ YGA       +      
Sbjct: 56  TLARHAAQNWPAEYLWQCTLVTTFEPCAMCAGTSYWANIGRVVYGAEESALLALTGDHPE 115

Query: 112 ----NGTQFYTLATCHHSPEIYPGISE--QRSRQIIQDFFKER 148
               +       A      E+   + E  +      + F++ R
Sbjct: 116 NPTLSLPCREVFARGQKKVEVIGPVPEAAEEMIATHRGFWETR 158


>gi|226942824|ref|YP_002797897.1| riboflavin biosynthesis protein RibD [Azotobacter vinelandii DJ]
 gi|226717751|gb|ACO76922.1| riboflavin biosynthesis protein RibD [Azotobacter vinelandii DJ]
          Length = 361

 Score = 99.6 bits (248), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 37/148 (25%), Positives = 52/148 (35%), Gaps = 21/148 (14%)

Query: 8   MSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M+ ALE A+           VG V V   +I+    +          HAE+ A+R     
Sbjct: 1   MARALELARQGLYSTHPNPRVGCVIVAAGRIVGEGWHVRAGE----PHAEVHALRQAG-- 54

Query: 66  LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
              E       YVTLEPC        CA A+  A + R+     +P       G      
Sbjct: 55  ---ETARGATAYVTLEPCSHHGRTPPCAEALVAAGVGRVVAAMQDPNPQVSGRGLARLRQ 111

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKE 147
           A      E+  G+ E  +R +   F K 
Sbjct: 112 AG----IEVEVGVLEAEARALNAGFVKR 135


>gi|226324153|ref|ZP_03799671.1| hypothetical protein COPCOM_01931 [Coprococcus comes ATCC 27758]
 gi|225207702|gb|EEG90056.1| hypothetical protein COPCOM_01931 [Coprococcus comes ATCC 27758]
          Length = 67

 Score = 99.6 bits (248), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 24/62 (38%), Positives = 34/62 (54%)

Query: 1  MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
          + +   +M  A+ +A+ A    E+P+G V V   KII R  NR    K+  AHAEI AI+
Sbjct: 5  LTEDEKYMKEAIRQAKKAWKIEEVPIGCVIVYQGKIIGRGYNRRTTDKNPLAHAEISAIK 64

Query: 61 MG 62
           G
Sbjct: 65 KG 66


>gi|260464042|ref|ZP_05812237.1| CMP/dCMP deaminase zinc-binding [Mesorhizobium opportunistum
           WSM2075]
 gi|259030213|gb|EEW31494.1| CMP/dCMP deaminase zinc-binding [Mesorhizobium opportunistum
           WSM2075]
          Length = 156

 Score = 99.6 bits (248), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 33/109 (30%), Positives = 44/109 (40%), Gaps = 8/109 (7%)

Query: 1   MKKGNVF--MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEIL 57
           M +  +F  +  A + A++AA     P G V V  +++I+   GN          HAE  
Sbjct: 1   MTRDRMFAHLRAANDVARDAAAHGHHPFGCVLVGPDDRILMGQGN-----ISTVRHAETK 55

Query: 58  AIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPK 106
             R        E L    L  T EPC MC   +  A I RL YG    K
Sbjct: 56  LARRAADAYPPEFLWSCTLVSTGEPCAMCTGTLYWANIGRLVYGFEETK 104


>gi|28900546|ref|NP_800201.1| putative riboflavin deaminase [Vibrio parahaemolyticus RIMD
           2210633]
 gi|260365428|ref|ZP_05777965.1| riboflavin biosynthesis protein RibD [Vibrio parahaemolyticus
           K5030]
 gi|260877493|ref|ZP_05889848.1| riboflavin biosynthesis protein RibD [Vibrio parahaemolyticus
           AN-5034]
 gi|260894835|ref|ZP_05903331.1| riboflavin biosynthesis protein RibD [Vibrio parahaemolyticus
           Peru-466]
 gi|28808926|dbj|BAC62034.1| putative riboflavin deaminase [Vibrio parahaemolyticus RIMD
           2210633]
 gi|308085328|gb|EFO35023.1| riboflavin biosynthesis protein RibD [Vibrio parahaemolyticus
           Peru-466]
 gi|308090602|gb|EFO40297.1| riboflavin biosynthesis protein RibD [Vibrio parahaemolyticus
           AN-5034]
 gi|308114425|gb|EFO51965.1| riboflavin biosynthesis protein RibD [Vibrio parahaemolyticus
           K5030]
          Length = 141

 Score = 99.6 bits (248), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 37/144 (25%), Positives = 57/144 (39%), Gaps = 21/144 (14%)

Query: 7   FMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           FM  ALE ++NA    +   PVG V V +N+I+S    +         HAE+ A+     
Sbjct: 5   FMRRALEVSKNALPECQPNPPVGCVLVKDNQIVSEGHTQAIGGN----HAEVEALNA--- 57

Query: 65  ILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
              Q  L  V  YVTLEPC        CA  +  + I ++     +P       G +   
Sbjct: 58  --YQGSLESVTAYVTLEPCSFVGRTPACAVTLVKSGIGKVVVAMLDPDPRNSGRGIEILK 115

Query: 119 LATCHHSPEIYPGISEQRSRQIIQ 142
            A      E+  G+  +   + + 
Sbjct: 116 QAG----IEVEIGLCSEEVSEFLT 135


>gi|229061784|ref|ZP_04199117.1| RibD (Riboflavin-specific deaminase) [Bacillus cereus AH603]
 gi|228717530|gb|EEL69194.1| RibD (Riboflavin-specific deaminase) [Bacillus cereus AH603]
          Length = 379

 Score = 99.6 bits (248), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 35/151 (23%), Positives = 58/151 (38%), Gaps = 21/151 (13%)

Query: 3   KGNVFMSCALEEAQ-NAALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
               +M  AL+ AQ  +   +  P VGAV V ++ I+    +     +    HAE+ A+ 
Sbjct: 11  TDQEYMRIALQLAQGTSGQTSPNPMVGAVVVKDSNIVGMGAHMRAGEE----HAEVHALH 66

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           M       E      +YVTLEPC        C   +    ++R+     +       NG 
Sbjct: 67  MAG-----ERAKGATVYVTLEPCSHFGKTPPCCELLIEKEVQRVVIATLDCNPLVSGNGK 121

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
           +    A      E+  G+ E  +  + + FF
Sbjct: 122 RKLEEAA----IEVTTGVLEAEATLLNRYFF 148


>gi|228953669|ref|ZP_04115709.1| Riboflavin biosynthesis protein [Bacillus thuringiensis serovar
           kurstaki str. T03a001]
 gi|229070840|ref|ZP_04204068.1| Riboflavin biosynthesis protein [Bacillus cereus F65185]
 gi|229179672|ref|ZP_04307022.1| Riboflavin biosynthesis protein [Bacillus cereus 172560W]
 gi|228603778|gb|EEK61249.1| Riboflavin biosynthesis protein [Bacillus cereus 172560W]
 gi|228712230|gb|EEL64177.1| Riboflavin biosynthesis protein [Bacillus cereus F65185]
 gi|228805903|gb|EEM52482.1| Riboflavin biosynthesis protein [Bacillus thuringiensis serovar
           kurstaki str. T03a001]
          Length = 350

 Score = 99.6 bits (248), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 36/125 (28%), Positives = 55/125 (44%), Gaps = 19/125 (15%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85
           VG+V V +N+I+    +          HAEI AIRM       E      +YVTLEPC+ 
Sbjct: 11  VGSVIVNDNRIVGVGAHMKAGE----PHAEIHAIRMAG-----EQARGGTIYVTLEPCSH 61

Query: 86  ------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139
                 CA AI  A I+++     +P       G +    A      E+  G+ E+ S++
Sbjct: 62  HGRTGPCAEAIVQAGIKKVVVATLDPNPLVSGRGIKILQDAG----IEVLVGVCEEESKK 117

Query: 140 IIQDF 144
           + + F
Sbjct: 118 MNEVF 122


>gi|55981033|ref|YP_144330.1| diaminohydroxyphosphoriboxylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase RibD [Thermus thermophilus HB8]
 gi|55772446|dbj|BAD70887.1| diaminohydroxyphosphoriboxylaminopyrimidine deaminase +
           5-amino-6-(5-phosphoribosylamino)uracil reductase (RibD)
           [Thermus thermophilus HB8]
          Length = 377

 Score = 99.6 bits (248), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 34/155 (21%), Positives = 55/155 (35%), Gaps = 23/155 (14%)

Query: 1   MKK-GNVFMSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57
           M+     F+  AL+ A+ A       P VGAV V   +I+    +          HAE+ 
Sbjct: 1   MRDLDERFLRRALQLAERARGHTSPNPLVGAVLVREGRIVGEGFHPRAGE----PHAEVF 56

Query: 58  AIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIE 111
           A++    +           YVTLEPC        C+ A+  A + R+   A         
Sbjct: 57  ALQQAGELA-----RGATAYVTLEPCDHFGRTPPCSLALLQAGVSRVVVAAREENPVAKG 111

Query: 112 NGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
              +           ++  G+ E  +R   + FF 
Sbjct: 112 GLERLRAG-----GVQVEAGLLEAEARAQNEVFFA 141


>gi|91209482|ref|YP_539468.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Escherichia coli UTI89]
 gi|117622675|ref|YP_851588.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Escherichia coli APEC O1]
 gi|218557323|ref|YP_002390236.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Escherichia coli S88]
 gi|237707592|ref|ZP_04538073.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Escherichia
           sp. 3_2_53FAA]
 gi|91071056|gb|ABE05937.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase;
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Escherichia coli UTI89]
 gi|115511799|gb|ABI99873.1| bifunctional pyrimidine deaminase/reductase [Escherichia coli APEC
           O1]
 gi|218364092|emb|CAR01757.1| fused diaminohydroxyphosphoribosylaminopyrimidine deaminase;
           5-amino-6-(5-phosphoribosylamino) uracil reductase
           [Escherichia coli S88]
 gi|226898802|gb|EEH85061.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Escherichia
           sp. 3_2_53FAA]
 gi|294490690|gb|ADE89446.1| riboflavin biosynthesis protein RibD [Escherichia coli IHE3034]
 gi|315289871|gb|EFU49261.1| riboflavin biosynthesis protein RibD [Escherichia coli MS 110-3]
 gi|323952974|gb|EGB48842.1| riboflavin biosynthesis protein RibD [Escherichia coli H252]
 gi|323958607|gb|EGB54310.1| riboflavin biosynthesis protein RibD [Escherichia coli H263]
          Length = 367

 Score = 99.6 bits (248), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 36/155 (23%), Positives = 58/155 (37%), Gaps = 21/155 (13%)

Query: 3   KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +   +M+ AL+ AQ      +  P VG V V + +I+    ++         HAE+ A+R
Sbjct: 2   QDEYYMARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGE----PHAEVQALR 57

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           M               YVTLEPC        C  A+  A + R+     +P       G 
Sbjct: 58  MAGEKA-----KGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVAAMQDPNPQVAGRGL 112

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
                A      ++  G+    + Q+ + F K  R
Sbjct: 113 YRLQQAG----IDVSHGLMMSEAEQLNKGFLKRMR 143


>gi|91225503|ref|ZP_01260625.1| putative riboflavin deaminase [Vibrio alginolyticus 12G01]
 gi|269968858|ref|ZP_06182841.1| putative riboflavin deaminase [Vibrio alginolyticus 40B]
 gi|91189866|gb|EAS76139.1| putative riboflavin deaminase [Vibrio alginolyticus 12G01]
 gi|269826538|gb|EEZ80889.1| putative riboflavin deaminase [Vibrio alginolyticus 40B]
          Length = 141

 Score = 99.6 bits (248), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 37/144 (25%), Positives = 57/144 (39%), Gaps = 21/144 (14%)

Query: 7   FMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           FM  ALE ++NA    +   PVG V V +N+I+S    +         HAE+ A+     
Sbjct: 5   FMRRALEVSKNALPECQPNPPVGCVLVKDNQIVSEGHTQAIGGN----HAEVEALNA--- 57

Query: 65  ILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
              Q  L  V  YVTLEPC        CA  +  + I ++     +P       G +   
Sbjct: 58  --YQGSLESVTAYVTLEPCSFVGRTPACAVTLVKSGISKVVVAILDPDPRNSGRGIEILK 115

Query: 119 LATCHHSPEIYPGISEQRSRQIIQ 142
            A      E+  G+  +   + + 
Sbjct: 116 QAG----IEVETGLCGEEVSEFLT 135


>gi|229092353|ref|ZP_04223525.1| Riboflavin biosynthesis protein [Bacillus cereus Rock3-42]
 gi|228691055|gb|EEL44822.1| Riboflavin biosynthesis protein [Bacillus cereus Rock3-42]
          Length = 350

 Score = 99.6 bits (248), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 36/125 (28%), Positives = 55/125 (44%), Gaps = 19/125 (15%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85
           VG+V V +N+I+    +          HAEI AIRM       E      +YVTLEPC+ 
Sbjct: 11  VGSVIVNDNRIVGIGAHMKAGE----PHAEIHAIRMAG-----EQARGGTIYVTLEPCSH 61

Query: 86  ------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139
                 CA AI  A I+++     +P       G +    A      E+  G+ E+ S++
Sbjct: 62  HGRTGPCAEAIVQAGIKKVVVATLDPNPLVSGRGIKILQDAG----IEVLVGVCEEESKK 117

Query: 140 IIQDF 144
           + + F
Sbjct: 118 MNEVF 122


>gi|110598673|ref|ZP_01386938.1| CMP/dCMP deaminase, zinc-binding [Chlorobium ferrooxidans DSM
           13031]
 gi|110339726|gb|EAT58236.1| CMP/dCMP deaminase, zinc-binding [Chlorobium ferrooxidans DSM
           13031]
          Length = 192

 Score = 99.6 bits (248), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 35/149 (23%), Positives = 56/149 (37%), Gaps = 12/149 (8%)

Query: 8   MSCALEEAQNAALRN-EIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           M   +E A+   L     P GA      +  ++S   N         AHAE++AI +  +
Sbjct: 32  MQFIIELARKNTLHGTGGPFGAAVFERKSGNLVSIGVNLVVRSCCSHAHAEMVAIAIAQK 91

Query: 65  ILSQEIL-----PEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
            ++   L     P+ +L  + EPC MC  AI  + I RL  GAS                
Sbjct: 92  KINSWTLNHAKSPQHELVTSCEPCAMCFGAIIWSGISRLVCGASTADATAAGFDEGPKPE 151

Query: 120 ATCH----HSPEIYPGISEQRSRQIIQDF 144
                      E+  GI    ++ + +D+
Sbjct: 152 KWIEELEKRGIEVVTGICSNDAKMVFRDY 180


>gi|229031753|ref|ZP_04187746.1| RibD (Riboflavin-specific deaminase) [Bacillus cereus AH1271]
 gi|228729637|gb|EEL80624.1| RibD (Riboflavin-specific deaminase) [Bacillus cereus AH1271]
          Length = 379

 Score = 99.6 bits (248), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 34/158 (21%), Positives = 59/158 (37%), Gaps = 24/158 (15%)

Query: 3   KGNVFMSCALEEAQ-NAALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
               +M  AL+ A+  +   +  P VGAV V +  I+    +     +    HAE+ A+ 
Sbjct: 11  TDQEYMRIALQLAEGTSGQTSPNPMVGAVVVKDGNIVGMGAHLRAGEE----HAEVHALH 66

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           M              +YVTLEPC        C   +    ++R+     +       NG 
Sbjct: 67  MAGEKA-----KGATVYVTLEPCSHFGKTPPCCELLIEKEVKRVVIATLDCNPLVSGNGK 121

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF---KERR 149
           +    A      ++  G+ E  +  + + FF   K +R
Sbjct: 122 KRLEEAG----IDVTTGVLEAEATLLNRFFFHYMKTKR 155


>gi|59711307|ref|YP_204083.1| fused diaminohydroxyphosphoribosylaminopyrimidine deaminase and
           5-amino-6-(5-phosphoribosylamino) uracil reductase
           [Vibrio fischeri ES114]
 gi|59479408|gb|AAW85195.1| fused diaminohydroxyphosphoribosylaminopyrimidine deaminase and
           5-amino-6-(5-phosphoribosylamino) uracil reductase
           [Vibrio fischeri ES114]
          Length = 372

 Score = 99.6 bits (248), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 35/151 (23%), Positives = 53/151 (35%), Gaps = 21/151 (13%)

Query: 2   KKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
            + ++ M  A+  A+         P VG V V N KII    +          HAE+ A+
Sbjct: 5   TQDHLMMQKAILLAKQGIYTTAPNPNVGCVLVKNGKIIGEGAHLKAGE----PHAEVHAL 60

Query: 60  RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113
           R   +            YVTLEPC        CA  +  A ++++     +P       G
Sbjct: 61  RQAGKEAQ-----GATAYVTLEPCSHYGRTPPCAEGLIKAGVKKVICAMVDPNPQVAGRG 115

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
                 A      E   G+ E  +R +   F
Sbjct: 116 LAMLDEAG----IETASGLLEADARALNPHF 142


>gi|47222036|emb|CAG08291.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 306

 Score = 99.6 bits (248), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 33/144 (22%), Positives = 57/144 (39%), Gaps = 30/144 (20%)

Query: 22  NEIPVGAVAVLN--NKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEIL-------- 71
              PVGA  V    + +++      R       HA ++ I +  R               
Sbjct: 168 GMEPVGAAVVDPATDTLVAVGH-DCRADH-PLHHAVMVCIDLVARSQGGGRYCFRKYPSC 225

Query: 72  -------------PEVDLYVTLEPCTMCAAAISLARIRRLYYGA--SNPKGGGIENGTQF 116
                          +DLYVT EPC MCA A+  +RI R++YG   S+   G +    + 
Sbjct: 226 RLARLDAAQPYICTGLDLYVTREPCVMCAMALVHSRIGRVFYGTVWSD---GALGTKYKI 282

Query: 117 YTLATCHHSPEIYPGISEQRSRQI 140
           ++    +H  E++ G+  +R  ++
Sbjct: 283 HSQKDLNHRFEVFRGVLGRRCEEL 306


>gi|229191491|ref|ZP_04318474.1| Riboflavin biosynthesis protein [Bacillus cereus ATCC 10876]
 gi|228591971|gb|EEK49807.1| Riboflavin biosynthesis protein [Bacillus cereus ATCC 10876]
          Length = 350

 Score = 99.6 bits (248), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 36/125 (28%), Positives = 55/125 (44%), Gaps = 19/125 (15%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85
           VG+V V +N+I+    +          HAEI AIRM       E      +YVTLEPC+ 
Sbjct: 11  VGSVIVNDNRIVGVGAHMKAGE----PHAEIHAIRMAG-----EQARGGTIYVTLEPCSH 61

Query: 86  ------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139
                 CA AI  A I+++     +P       G +    A      E+  G+ E+ S++
Sbjct: 62  HGRTGPCAEAIVQAGIKKVVVATLDPNPLVSGRGIKILQDAG----IEVLVGVCEEESKK 117

Query: 140 IIQDF 144
           + + F
Sbjct: 118 MNEVF 122


>gi|297191042|ref|ZP_06908440.1| cytidine/deoxycytidine deaminase [Streptomyces pristinaespiralis
           ATCC 25486]
 gi|197721517|gb|EDY65425.1| cytidine/deoxycytidine deaminase [Streptomyces pristinaespiralis
           ATCC 25486]
          Length = 158

 Score = 99.2 bits (247), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 26/101 (25%), Positives = 46/101 (45%), Gaps = 1/101 (0%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
              F+  A+  A +A    + P G++ V  +   ++ A N  +   D++AH E+   R  
Sbjct: 21  DAAFLRRAVAIAAHAVTLGDAPYGSLLVGPDGATLAEAHNTVQRDNDISAHPELKLARWA 80

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
            R L ++      LY + +PC MC   I  + + R+ Y  S
Sbjct: 81  ARELDKDTASGTTLYTSCQPCGMCTGGIVRSGLGRVVYALS 121


>gi|268317615|ref|YP_003291334.1| riboflavin biosynthesis protein RibD [Rhodothermus marinus DSM
           4252]
 gi|262335149|gb|ACY48946.1| riboflavin biosynthesis protein RibD [Rhodothermus marinus DSM
           4252]
          Length = 368

 Score = 99.2 bits (247), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 39/146 (26%), Positives = 55/146 (37%), Gaps = 17/146 (11%)

Query: 8   MSCALEEA-QNAALRNEIP-VGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           M   LE A + A   +  P VGAV V  + ++++   +          HAE +AI    R
Sbjct: 1   MVRCLELAFRGAGRVSPNPMVGAVLVDTDGQVLAEGWHDRYGG----PHAERVAIEEALR 56

Query: 65  ILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
               E L    LYV LEPC        CA  I    I R+  G  +P       G     
Sbjct: 57  RHGPEALRRATLYVNLEPCAHYGKTPPCADFIITHGIPRVVVGMVDPFPQVAGRGIARLR 116

Query: 119 LATCHHSPEIYPGISEQRSRQIIQDF 144
                H  ++  G+ E   R+  + F
Sbjct: 117 A----HGVQVEVGVLEAACRRFNEAF 138


>gi|328470490|gb|EGF41401.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Vibrio
           parahaemolyticus 10329]
          Length = 141

 Score = 99.2 bits (247), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 37/144 (25%), Positives = 57/144 (39%), Gaps = 21/144 (14%)

Query: 7   FMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           FM  ALE ++NA    +   PVG V V +N+I+S    +         HAE+ A+     
Sbjct: 5   FMRRALEVSKNALPECQPNPPVGCVLVKDNQIVSEGHTQAIGGN----HAEVEALNA--- 57

Query: 65  ILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
              Q  L  V  YVTLEPC        CA  +  + I ++     +P       G +   
Sbjct: 58  --YQGSLESVTAYVTLEPCSFVGRTPACAVTLVKSGIGKVVVAMLDPDPRNSGRGIEILK 115

Query: 119 LATCHHSPEIYPGISEQRSRQIIQ 142
            A      E+  G+  +   + + 
Sbjct: 116 QAG----IEVEIGLCGEEVSEFLT 135


>gi|254515088|ref|ZP_05127149.1| cytosine deaminase [gamma proteobacterium NOR5-3]
 gi|219677331|gb|EED33696.1| cytosine deaminase [gamma proteobacterium NOR5-3]
          Length = 166

 Score = 99.2 bits (247), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 34/148 (22%), Positives = 56/148 (37%), Gaps = 13/148 (8%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIR 60
                 +  A E+A+       +PVGA     N K++S   NR  +  D + H E  A R
Sbjct: 16  TDYQAMLGVAFEQAKRGFEEGGVPVGAAMFDGNGKLLSVGRNRRVQEGDPSIHGETDAFR 75

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              R   Q+   +  L  TL PC  C+  +   RI  +  G S    G +     +   A
Sbjct: 76  KAGR---QKNYRDCVLVSTLAPCWYCSGLVRQFRIGTVVVGESQNFAGHL----DWLREA 128

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKER 148
                  +   +++ R   ++  F + R
Sbjct: 129 G----VRVIE-LNDPRCTALMASFIERR 151


>gi|156186024|gb|ABU55330.1| cytidine and deoxycytidylate deaminase family protein
           [Callosobruchus chinensis]
          Length = 71

 Score = 99.2 bits (247), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 39/71 (54%), Positives = 48/71 (67%), Gaps = 3/71 (4%)

Query: 35  KIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLAR 94
            ++S A N      D TAHAE+ AI+  C +LS   L + D+YVTLEPC MCA AIS AR
Sbjct: 4   NVVSSAHN---ISNDPTAHAEMFAIKQECELLSTSTLYDSDIYVTLEPCPMCAQAISFAR 60

Query: 95  IRRLYYGASNP 105
           I+RLY+GA NP
Sbjct: 61  IKRLYFGAYNP 71


>gi|254229831|ref|ZP_04923237.1| Pyrimidine deaminase [Vibrio sp. Ex25]
 gi|262395603|ref|YP_003287456.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Vibrio sp.
           Ex25]
 gi|151937667|gb|EDN56519.1| Pyrimidine deaminase [Vibrio sp. Ex25]
 gi|262339197|gb|ACY52991.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Vibrio sp.
           Ex25]
          Length = 141

 Score = 99.2 bits (247), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 37/146 (25%), Positives = 58/146 (39%), Gaps = 21/146 (14%)

Query: 5   NVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
           + FM  ALE ++NA    +   PVG V V +N+I+S    +         HAE+ A+   
Sbjct: 3   HEFMRRALEVSKNALPECQPNPPVGCVLVKDNQIVSEGHTQAIGGN----HAEVEALNA- 57

Query: 63  CRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116
                Q  L  V  YVTLEPC        CA  +  + I ++     +P       G + 
Sbjct: 58  ----YQGSLESVTAYVTLEPCSFVGRTPACAVTLVKSGIGKVVVAMLDPDPRNSGRGIEI 113

Query: 117 YTLATCHHSPEIYPGISEQRSRQIIQ 142
              A      E+  G+  +   + + 
Sbjct: 114 LKQAG----IEVEIGLCGEEVSEFLT 135


>gi|239905200|ref|YP_002951939.1| diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Desulfovibrio magneticus RS-1]
 gi|239795064|dbj|BAH74053.1| diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Desulfovibrio magneticus RS-1]
          Length = 381

 Score = 99.2 bits (247), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 42/156 (26%), Positives = 60/156 (38%), Gaps = 29/156 (18%)

Query: 2   KKGNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57
               VFM+ ALE A+    R  +   P VGAV V +  I++   ++         HAE+ 
Sbjct: 4   DNDAVFMARALELAERG--RGFVTPNPRVGAVLVRDGAIVAEGWHKVFGG----PHAEVE 57

Query: 58  AIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPK---GG 108
            +R               +YVTLEPC        C+  +  A + R+  G  +P    GG
Sbjct: 58  CLREAEERGIDP--AGATMYVTLEPCNHFGKTPPCSRTVLEAGVSRVVIGCLDPNPVAGG 115

Query: 109 GIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
           G E   Q            +  GI  Q  R  + DF
Sbjct: 116 GAETLRQ--------GGVAVDVGILGQECRDAVADF 143


>gi|24217029|ref|NP_714510.1| cytidine deaminase [Leptospira interrogans serovar Lai str. 56601]
 gi|24198438|gb|AAN51528.1| cytidine deaminase [Leptospira interrogans serovar Lai str. 56601]
          Length = 201

 Score = 99.2 bits (247), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 42/131 (32%), Positives = 61/131 (46%), Gaps = 2/131 (1%)

Query: 19  ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYV 78
             R EIP         K+IS   N   +  D + H+EIL IR     L    L +  L  
Sbjct: 69  RDREEIPSFTRIYHKEKLISETFNEVEKKSDSSFHSEILCIRNAKEKLKTRYLADCMLIT 128

Query: 79  TLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSR 138
           +LEPC MCA  I L+RI ++ Y     +G GI +      + + +  PE++  I  + S+
Sbjct: 129 SLEPCLMCAGTILLSRIPKVVYLLPAKQGEGISS-LSIEMIYSRNFFPELFC-IPTEISK 186

Query: 139 QIIQDFFKERR 149
              + FFK RR
Sbjct: 187 NAFKSFFKVRR 197


>gi|319775121|ref|YP_004137609.1| riboflavin biosynthesis protein RibD [Haemophilus influenzae F3047]
 gi|329122965|ref|ZP_08251536.1| riboflavin biosynthesis protein RibD [Haemophilus aegyptius ATCC
           11116]
 gi|317449712|emb|CBY85919.1| riboflavin biosynthesis protein RibD [Haemophilus influenzae F3047]
 gi|327471896|gb|EGF17336.1| riboflavin biosynthesis protein RibD [Haemophilus aegyptius ATCC
           11116]
          Length = 372

 Score = 99.2 bits (247), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 35/156 (22%), Positives = 56/156 (35%), Gaps = 21/156 (13%)

Query: 2   KKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
            +  VFM  AL+ A          P VG V V N +I+    +   +      HAE +A+
Sbjct: 6   SQDCVFMQRALDLAAKGQYTTTPNPSVGCVLVKNGEIVGEGFH--FKAGQP--HAERVAL 61

Query: 60  RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113
                    E       YVTLEPC        CA  +  A + ++     +P       G
Sbjct: 62  AQAG-----ENAKGATAYVTLEPCSHYGRTPPCALGLIEAGVVKVIAAMQDPNPQVAGKG 116

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +  + A    +      +   ++ +I + F K  R
Sbjct: 117 LKMLSDAGIESAVN----LLNDQAEKINKGFLKRMR 148


>gi|301169668|emb|CBW29269.1| fused diaminohydroxyphosphoribosylaminopyrimidine deaminase and
           5-amino-6-(5-phosphoribosylamino) uracil reductase
           [Haemophilus influenzae 10810]
          Length = 372

 Score = 99.2 bits (247), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 35/156 (22%), Positives = 56/156 (35%), Gaps = 21/156 (13%)

Query: 2   KKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
            +  VFM  AL+ A          P VG V V N +I+    +   +      HAE +A+
Sbjct: 6   SQDCVFMQRALDLAAKGQYTTTPNPSVGCVLVKNGEIVGEGFH--FKAGQP--HAERVAL 61

Query: 60  RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113
                    E       YVTLEPC        CA  +  A + ++     +P       G
Sbjct: 62  AQAG-----ENAKGATAYVTLEPCAHYGRTPPCALGLIEAGVVKVIAAMQDPNPQVAGKG 116

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +  + A    +      +   ++ +I + F K  R
Sbjct: 117 LKMLSDAGIESAVN----LLNDQAEKINKGFLKRMR 148


>gi|148828121|ref|YP_001292874.1| hypothetical protein CGSHiGG_08285 [Haemophilus influenzae PittGG]
 gi|148719363|gb|ABR00491.1| hypothetical protein CGSHiGG_08285 [Haemophilus influenzae PittGG]
          Length = 372

 Score = 99.2 bits (247), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 35/156 (22%), Positives = 56/156 (35%), Gaps = 21/156 (13%)

Query: 2   KKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
            +  VFM  AL+ A          P VG V V N +I+    +   +      HAE +A+
Sbjct: 6   SQDCVFMQRALDLAAKGQYTTTPNPSVGCVLVKNGEIVGEGFH--FKAGQP--HAERVAL 61

Query: 60  RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113
                    E       YVTLEPC        CA  +  A + ++     +P       G
Sbjct: 62  AQAG-----ENAKGATAYVTLEPCAHYGRTPPCALGLIEAGVVKVIAAMQDPNPQVAGKG 116

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +  + A    +      +   ++ +I + F K  R
Sbjct: 117 LKMLSDAGIESAVN----LLNDQAEKINKGFLKRMR 148


>gi|68249531|ref|YP_248643.1| riboflavin biosynthesis protein RibD [Haemophilus influenzae
           86-028NP]
 gi|68057730|gb|AAX87983.1| riboflavin biosynthesis protein RibD [Haemophilus influenzae
           86-028NP]
          Length = 372

 Score = 99.2 bits (247), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 35/156 (22%), Positives = 56/156 (35%), Gaps = 21/156 (13%)

Query: 2   KKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
            +  VFM  AL+ A          P VG V V N +I+    +   +      HAE +A+
Sbjct: 6   SQDCVFMQRALDLAAKGQYTTTPNPSVGCVLVKNGEIVGEGFH--FKAGQP--HAERVAL 61

Query: 60  RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113
                    E       YVTLEPC        CA  +  A + ++     +P       G
Sbjct: 62  AQAG-----ENAKGATAYVTLEPCSHYGRTPPCALGLIEAGVVKVIAAMQDPNPQVAGKG 116

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +  + A    +      +   ++ +I + F K  R
Sbjct: 117 LKMLSDAGIESAVN----LLNDQAEKINKGFLKRMR 148


>gi|323699086|ref|ZP_08110998.1| riboflavin biosynthesis protein RibD [Desulfovibrio sp. ND132]
 gi|323459018|gb|EGB14883.1| riboflavin biosynthesis protein RibD [Desulfovibrio desulfuricans
           ND132]
          Length = 364

 Score = 99.2 bits (247), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 36/145 (24%), Positives = 53/145 (36%), Gaps = 19/145 (13%)

Query: 8   MSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M+ A+E A          P VGAV V +  I++   +          HAE   +    R 
Sbjct: 1   MARAVELAGRGRGATAPNPCVGAVLVRDGVIVAEGWHTRFGRL----HAERECLADARRK 56

Query: 66  LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
                     +YVTLEPC        C  A+  A +  ++ G  +P         +    
Sbjct: 57  GVDPR--GAAMYVTLEPCNHHGKTPPCTEALIEAGVAEVFVGTRDPNPVAAGGVEKLRA- 113

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDF 144
               H  E+  G+ EQ  R +I DF
Sbjct: 114 ----HGIEVTVGVLEQPCRDLIADF 134


>gi|319760369|ref|YP_004124307.1| riboflavin biosynthesis protein RibD [Candidatus Blochmannia vafer
           str. BVAF]
 gi|318039083|gb|ADV33633.1| riboflavin biosynthesis protein RibD [Candidatus Blochmannia vafer
           str. BVAF]
          Length = 383

 Score = 99.2 bits (247), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 34/156 (21%), Positives = 54/156 (34%), Gaps = 23/156 (14%)

Query: 3   KGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
           +   ++S A + A+       +P   VG V V +N +I    +          HAEI A+
Sbjct: 8   EDIGYLSRAFQLARKGRFTT-MPNPNVGCVIVKDNHVIGEGYHMRAGEN----HAEINAL 62

Query: 60  RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113
            +               YVTLEPC        C  A+  + I+R+     +P       G
Sbjct: 63  SVAGNFA-----KGATAYVTLEPCSHYGRTPPCTTALIKSGIKRVVVSMLDPHPDLTGRG 117

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
            Q    +       +   I    +  I + F K  R
Sbjct: 118 IQLLKQSGIL----VSHSIMLSEAESINKGFIKRIR 149


>gi|94265528|ref|ZP_01289276.1| Riboflavin biosynthesis protein RibD:Riboflavin-specific
           deaminase-like [delta proteobacterium MLMS-1]
 gi|93453969|gb|EAT04315.1| Riboflavin biosynthesis protein RibD:Riboflavin-specific
           deaminase-like [delta proteobacterium MLMS-1]
          Length = 374

 Score = 99.2 bits (247), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 38/152 (25%), Positives = 57/152 (37%), Gaps = 22/152 (14%)

Query: 4   GNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
              +M  AL EA+         P VGAV V N +++ +  +R         HA       
Sbjct: 5   DLTYMRLALAEARKGVGKTAPNPCVGAVVVKNGRVVGKGWHRKIGQ----PHA-----EA 55

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
                + E      +YVTLEPC        C+ AI  A IRR+ YG ++P         +
Sbjct: 56  EALRAAGEAAAGATIYVTLEPCNHHGRTPPCSEAIIAAGIRRVVYGLADPHEVARGGAKR 115

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
             +        E+  G+     R++   F K 
Sbjct: 116 LESA-----GLEVLGGVLADECRRLNLPFIKR 142


>gi|37679045|ref|NP_933654.1| pyrimidine reductase [Vibrio vulnificus YJ016]
 gi|37197787|dbj|BAC93625.1| pyrimidine reductase [Vibrio vulnificus YJ016]
          Length = 368

 Score = 99.2 bits (247), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 32/152 (21%), Positives = 50/152 (32%), Gaps = 21/152 (13%)

Query: 4   GNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
               M  A+  A+         P VG V + + +I+    +          HAE+ A+RM
Sbjct: 8   DRQMMLRAIALAKRGLYTTAPNPNVGCVLLRDGEIVGEGFHFRAGE----PHAEVHAMRM 63

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
                          YVTLEPC        CA  +  A + R+     +P       G  
Sbjct: 64  AADKA-----KGATAYVTLEPCSHYGRTPPCAEGLIKAGVSRVVCAMEDPNPQVAGRGFA 118

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
               A      E+  G+ +  +  +   F K 
Sbjct: 119 MLREAG----IEVSVGLLQAEAEALNPAFIKR 146


>gi|226364615|ref|YP_002782397.1| cytosine deaminase [Rhodococcus opacus B4]
 gi|226243104|dbj|BAH53452.1| cytosine deaminase [Rhodococcus opacus B4]
          Length = 159

 Score = 99.2 bits (247), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 29/143 (20%), Positives = 52/143 (36%), Gaps = 15/143 (10%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           ++ A+ EA+       IP+GA     +  ++ R  NR  +  D + H E  A R   R  
Sbjct: 18  LAVAIAEAELGRREGGIPIGAALFAGDGTLLGRGRNRRVQHGDPSVHGETDAFRAAGR-- 75

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
            Q       +  TL PC  C+  +    I  +  G S    GG      +          
Sbjct: 76  -QRDYRSTIMVTTLSPCWYCSGLVRQFNIGAIVVGESVTFTGG----HDWLRDNG----V 126

Query: 127 EIYPGISEQR-SRQIIQDFFKER 148
           ++   +   +    ++ +F + R
Sbjct: 127 DVT--VLRDQHCIDLMTEFIQAR 147


>gi|326328847|ref|ZP_08195181.1| cytidine/deoxycytidylate deaminase, zinc-binding region
           [Nocardioidaceae bacterium Broad-1]
 gi|325953332|gb|EGD45338.1| cytidine/deoxycytidylate deaminase, zinc-binding region
           [Nocardioidaceae bacterium Broad-1]
          Length = 162

 Score = 99.2 bits (247), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 33/151 (21%), Positives = 54/151 (35%), Gaps = 10/151 (6%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRM 61
                +   LE A  A    + P G+V   +    +    NR     D TAH EI   R 
Sbjct: 8   TDMTHLRRCLELAAEALADGDGPFGSVLADSAGNALQEGRNREHTTGDPTAHPEIELARW 67

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPK-------GGGIENGT 114
               L         +Y + E C MC+AA   + + R+ Y AS+ +        G  E+  
Sbjct: 68  AAIQLDPATRAGATVYTSGEHCPMCSAAHGWSGVGRIVYIASSEQLTQWRAGWGAGESPV 127

Query: 115 QFYTLATCHHSPEIYPGISE--QRSRQIIQD 143
           +   +     + E+   + E  +    + Q 
Sbjct: 128 RALPIQEVAPAVEVIGPVPELVEEIHALHQQ 158


>gi|110835035|ref|YP_693894.1| (S)-2-hydroxy-fatty-acid dehydrogenase [Alcanivorax borkumensis
           SK2]
 gi|110648146|emb|CAL17622.1| (S)-2-hydroxy-fatty-acid dehydrogenase [Alcanivorax borkumensis
           SK2]
          Length = 377

 Score = 99.2 bits (247), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 35/149 (23%), Positives = 55/149 (36%), Gaps = 21/149 (14%)

Query: 4   GNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
            + +M+ AL+ A+      +  P VG V V +  ++    +        T HAE  A+  
Sbjct: 7   DHQYMARALQLARRGLYTTDPNPRVGCVLVRDGAVVGEGFHARA----GTPHAERHALAQ 62

Query: 62  GCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQ 115
                  E       YVTLEPC+       CA A+  A + R+     +P       G Q
Sbjct: 63  AG-----ERARGATAYVTLEPCSHTGRTGPCADALIDAGVTRVVAAMEDPNPLVAGQGLQ 117

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDF 144
               A    +     G+ E  +R +   F
Sbjct: 118 RLADAGIATAV----GLLEAEARALNPGF 142


>gi|152980375|ref|YP_001354124.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Janthinobacterium sp. Marseille]
 gi|151280452|gb|ABR88862.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Janthinobacterium sp. Marseille]
          Length = 363

 Score = 98.8 bits (246), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 37/144 (25%), Positives = 54/144 (37%), Gaps = 18/144 (12%)

Query: 9   SCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
             ALE A          P VG V V  NK+I     +        AHAE+ A+       
Sbjct: 11  RLALELAAKGMFTTTPNPRVGCVIVKENKVIGSGYTQPVGH----AHAEVQALNDAADR- 65

Query: 67  SQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
               +    +YVTLEPC        CA A+  AR+ R+    ++P       G      A
Sbjct: 66  -GFDVSGSTVYVTLEPCSHHGRTPPCADALIKARVARVVAAIADPNPLVAGQGLARLEAA 124

Query: 121 TCHHSPEIYPGISEQRSRQIIQDF 144
                 ++  G+ E  +R++   F
Sbjct: 125 G----IQVSCGVLEAEAREMNIGF 144


>gi|329898131|ref|ZP_08272333.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase [gamma
           proteobacterium IMCC3088]
 gi|328920911|gb|EGG28343.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase [gamma
           proteobacterium IMCC3088]
          Length = 361

 Score = 98.8 bits (246), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 33/145 (22%), Positives = 54/145 (37%), Gaps = 21/145 (14%)

Query: 8   MSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M  A+  A++        P VG V V + +I+     +         HAE++A+      
Sbjct: 1   MQRAINLAEHGKYSAKPNPHVGCVIVKDGQIVGEGYTQPPGQG----HAEVMALAQAG-- 54

Query: 66  LSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
              E       YVTLEPC        C+ A+  A I ++     +P      +G +    
Sbjct: 55  ---EQARGATAYVTLEPCNHQGRTGPCSQALIQAGISKVVAAIEDPYPEVAGSGFEALKH 111

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDF 144
           A      E+  G+     +Q +Q F
Sbjct: 112 AG----IEVRVGLLADTVKQQLQGF 132


>gi|229513912|ref|ZP_04403374.1| diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Vibrio cholerae TMA 21]
 gi|229349093|gb|EEO14050.1| diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Vibrio cholerae TMA 21]
          Length = 367

 Score = 98.8 bits (246), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 35/152 (23%), Positives = 55/152 (36%), Gaps = 21/152 (13%)

Query: 4   GNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
            +  MS A+E A       +  P VG V     +I+    +          HAE+ A+R 
Sbjct: 8   DHQMMSRAIELAWRGRFTTSPNPNVGCVITRGEQIVGEGFHFRAGE----PHAEVHAMRQ 63

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
              +           YVTLEPC        CA  +  A + ++     +P       G Q
Sbjct: 64  AGELT-----RGATAYVTLEPCSHYGRTPPCAEGLIKAGVAKVICAMQDPNPQVAGKGVQ 118

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
               A      E+  G+ E+ +R + + F K 
Sbjct: 119 MLRDAG----IEVEVGLLEEDARALNRGFLKR 146


>gi|156186022|gb|ABU55329.1| cytidine and deoxycytidylate deaminase family protein
           [Callosobruchus chinensis]
          Length = 71

 Score = 98.8 bits (246), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 38/71 (53%), Positives = 47/71 (66%), Gaps = 3/71 (4%)

Query: 35  KIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLAR 94
            ++S A N      D TAHAE+LAI+  C +LS   L + D+YVTLEPC MCA AIS A 
Sbjct: 4   NVVSSAHN---ISNDPTAHAEMLAIKQECELLSTSTLYDSDIYVTLEPCPMCAQAISFAG 60

Query: 95  IRRLYYGASNP 105
           I+R Y+GA NP
Sbjct: 61  IKRFYFGAYNP 71


>gi|149909347|ref|ZP_01898003.1| Putative pyrimidine deaminase/pyrimidine reductase [Moritella sp.
           PE36]
 gi|149807664|gb|EDM67612.1| Putative pyrimidine deaminase/pyrimidine reductase [Moritella sp.
           PE36]
          Length = 440

 Score = 98.8 bits (246), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 35/156 (22%), Positives = 53/156 (33%), Gaps = 21/156 (13%)

Query: 2   KKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
              ++ M  A+  AQ         P VG V V  +K+I    +         AHAE+ A+
Sbjct: 42  DTDHLHMQRAIALAQKGRFTTAPNPNVGCVLVKADKVIGEGFHLRAGE----AHAEVHAL 97

Query: 60  RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113
                    +       YVTLEPC        CAAA+  A +  +     +P       G
Sbjct: 98  NSAG-----DDAQGATCYVTLEPCSHYGRTPPCAAALVNANVHEVVIAMVDPNPQVAGKG 152

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
                 A      ++  G+   +S  +   F    R
Sbjct: 153 IAILIAAG----IKVRVGLLSAQSHALNPGFILRMR 184


>gi|260778186|ref|ZP_05887079.1| putative deaminase [Vibrio coralliilyticus ATCC BAA-450]
 gi|260606199|gb|EEX32484.1| putative deaminase [Vibrio coralliilyticus ATCC BAA-450]
          Length = 159

 Score = 98.8 bits (246), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 29/96 (30%), Positives = 40/96 (41%), Gaps = 1/96 (1%)

Query: 21  RNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVT 79
           +  IP  A  V    +++ +  NR  E  D TAHAE+ AIR  CR      L  + L  +
Sbjct: 26  QGGIPFTAYVVNSKGEVLGKGVNRVLENHDPTAHAEVEAIRDACRNTKSSHLRGLTLLAS 85

Query: 80  LEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
            EPC MC      A I  + Y A   +        +
Sbjct: 86  GEPCAMCYLNALFAGISEVVYVADRDEAARHGFDYR 121


>gi|220931696|ref|YP_002508604.1| diaminohydroxyphosphoribosylaminopyrimidine
           deaminase;5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Halothermothrix orenii H 168]
 gi|219993006|gb|ACL69609.1| diaminohydroxyphosphoribosylaminopyrimidine
           deaminase;5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Halothermothrix orenii H 168]
          Length = 371

 Score = 98.8 bits (246), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 32/151 (21%), Positives = 54/151 (35%), Gaps = 29/151 (19%)

Query: 2   KKGNVFMSCALEEAQNAALRNEI-----P-VGAVAVLNNKIISRAGNRNRELKDVTAHAE 55
              + +M   LE A+      E      P VGA+ V   +I+ +  ++         HAE
Sbjct: 7   DTHHSYMQKVLELARK----GEGYTAPNPLVGAIIVREGEIVGQGFHQYYGG----PHAE 58

Query: 56  ILAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGG 109
           ILA+         E      LYV LEPC        C   I  + ++R+     +P    
Sbjct: 59  ILALEEAG-----ERARGATLYVNLEPCCHYGKTPPCTKKIIDSGVKRVLAAMFDPNPLV 113

Query: 110 IENGTQFYTLATCHHSPEIYPGISEQRSRQI 140
              G +           E+  G+  + + ++
Sbjct: 114 AGKGVKELQENG----IEVEVGLLRKEAERL 140


>gi|145638234|ref|ZP_01793844.1| formamidopyrimidine-DNA glycosylase [Haemophilus influenzae PittII]
 gi|145272563|gb|EDK12470.1| formamidopyrimidine-DNA glycosylase [Haemophilus influenzae PittII]
 gi|309751389|gb|ADO81373.1| Riboflavin biosynthesis protein RibD [Haemophilus influenzae R2866]
          Length = 372

 Score = 98.8 bits (246), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 36/156 (23%), Positives = 56/156 (35%), Gaps = 21/156 (13%)

Query: 2   KKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
            +  VFM  AL+ A          P VG V V N +I+    +   +      HAE +A+
Sbjct: 6   SQDCVFMQRALDLAAKGQYTTTPNPSVGCVLVKNGEIVGEGFH--FKAGQP--HAERVAL 61

Query: 60  RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113
                    E       YVTLEPC        CA  +  A + ++     +P       G
Sbjct: 62  AQAG-----ENAKGATAYVTLEPCSHYGRTPPCALGLIEAGVVKVIAAMQDPNPQVAGKG 116

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +  + A      E    +   ++ +I + F K  R
Sbjct: 117 LKMLSDAG----IESAANLLNDQAEKINKGFLKRMR 148


>gi|320157206|ref|YP_004189585.1| diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Vibrio vulnificus MO6-24/O]
 gi|319932518|gb|ADV87382.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Vibrio vulnificus MO6-24/O]
          Length = 368

 Score = 98.8 bits (246), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 32/152 (21%), Positives = 50/152 (32%), Gaps = 21/152 (13%)

Query: 4   GNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
               M  A+  A+         P VG V + + +I+    +          HAE+ A+RM
Sbjct: 8   DRQMMLRAIALAKRGLYTTAPNPNVGCVLLRDGEIVGEGFHFRAGE----PHAEVHAMRM 63

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
                          YVTLEPC        CA  +  A + R+     +P       G  
Sbjct: 64  AGDKA-----KGATAYVTLEPCSHYGRTPPCAEGLIKAGVSRVVCAMEDPNPQVAGRGFA 118

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
               A      E+  G+ +  +  +   F K 
Sbjct: 119 MLREAG----IEVSVGLLQTEAEALNPAFIKR 146


>gi|254281521|ref|ZP_04956489.1| riboflavin biosynthesis protein RibD [gamma proteobacterium
           NOR51-B]
 gi|219677724|gb|EED34073.1| riboflavin biosynthesis protein RibD [gamma proteobacterium
           NOR51-B]
          Length = 371

 Score = 98.8 bits (246), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 34/149 (22%), Positives = 50/149 (33%), Gaps = 21/149 (14%)

Query: 4   GNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
             ++M+ AL  A  A         VG V V   K+I     +         HAEI A+  
Sbjct: 6   DEIYMARALALAGEARFWATPNPHVGCVLVHEGKVIGEGFTQPAGGN----HAEIEALEH 61

Query: 62  GCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQ 115
                          YVTLEPC        CA A+  A + R+     +P       G  
Sbjct: 62  A-----TADPSGATAYVTLEPCAHTGRTGPCADALIDAGLTRVVVAVGDPYPAVDGRGID 116

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDF 144
               A      E+  G+   ++  ++  F
Sbjct: 117 RLRAAG----IEVSVGVLAVQASDLMAGF 141


>gi|332255864|ref|XP_003277047.1| PREDICTED: tRNA-specific adenosine deaminase-like protein 3
           [Nomascus leucogenys]
          Length = 367

 Score = 98.8 bits (246), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 31/155 (20%), Positives = 57/155 (36%), Gaps = 42/155 (27%)

Query: 26  VGAVAVLN--NKIISRAGNRNRELKDVTAHAEILAIR--MGCRILSQEILP--------- 72
           VGAV V    +++++          +   HA ++ +      +                 
Sbjct: 211 VGAVVVDPASDRVLATGH-DCSSADNPLLHAVMVCVDLVAHGQGRGTYDFRPFPACSFAP 269

Query: 73  ---------------------------EVDLYVTLEPCTMCAAAISLARIRRLYYGASNP 105
                                        DLYVT EPC MCA  +  +RI R++YGAS+P
Sbjct: 270 AAALQAVRAGAVRKLDAEEDGLPYVCTGYDLYVTREPCAMCAMGLVHSRILRVFYGASSP 329

Query: 106 KGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140
             G +    + +     +H  +++ G+ E++ R +
Sbjct: 330 D-GALGTRFRIHARPDLNHRFQVFRGVLEEQCRWL 363


>gi|332524984|ref|ZP_08401168.1| cmp/dcmp deaminase zinc-binding protein [Rubrivivax benzoatilyticus
           JA2]
 gi|332108277|gb|EGJ09501.1| cmp/dcmp deaminase zinc-binding protein [Rubrivivax benzoatilyticus
           JA2]
          Length = 161

 Score = 98.8 bits (246), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 36/155 (23%), Positives = 53/155 (34%), Gaps = 18/155 (11%)

Query: 6   VFMSCALEEAQNAALRNEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
            ++  A E A  A      P GAV V    + ++   GN          HAE +  R   
Sbjct: 11  AWLRRANEVAARALAEGRHPFGAVLVGPDGDTVLLEQGNV-----SAVEHAEAVLAREAA 65

Query: 64  RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENG------TQFY 117
           R  + E L    L  T+EPC MCA     A I RL YG    +   +             
Sbjct: 66  RRWAPEFLAGCTLVTTVEPCAMCAGTQYWAGIGRLVYGMEERELLALTGAHPENPTLDLP 125

Query: 118 ---TLATCHHSPEIYPGISEQ--RSRQIIQDFFKE 147
                A    + E+   +         + +DF++ 
Sbjct: 126 CREVFARGQRAIEVIGPVPAAVPEIAALHRDFWQR 160


>gi|229174787|ref|ZP_04302310.1| RibD (Riboflavin-specific deaminase) [Bacillus cereus MM3]
 gi|228608695|gb|EEK65994.1| RibD (Riboflavin-specific deaminase) [Bacillus cereus MM3]
          Length = 379

 Score = 98.8 bits (246), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 34/158 (21%), Positives = 57/158 (36%), Gaps = 24/158 (15%)

Query: 3   KGNVFMSCALEEAQ-NAALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
               +M  AL+ A+  +   +  P VGAV V    I+    +     +    HAE+ A+ 
Sbjct: 11  TDQEYMRIALQLAEGTSGQTSPNPMVGAVVVKEGNIVGIGAHLRAGEE----HAEVHALH 66

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           M              +YVTLEPC        C   +    ++R+     +        G 
Sbjct: 67  MAGEKA-----KGATVYVTLEPCSHFGKTPPCCELLIKKGVKRVVIATLDCNPLVSGTGK 121

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF---KERR 149
           +    A      E+  G+ E  +  + + FF   K +R
Sbjct: 122 RRLEEAG----IEVATGVLETEATLLNRFFFHYMKTKR 155


>gi|229542331|ref|ZP_04431391.1| riboflavin biosynthesis protein RibD [Bacillus coagulans 36D1]
 gi|229326751|gb|EEN92426.1| riboflavin biosynthesis protein RibD [Bacillus coagulans 36D1]
          Length = 370

 Score = 98.8 bits (246), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 39/153 (25%), Positives = 65/153 (42%), Gaps = 22/153 (14%)

Query: 1   MKKGNVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           M+K   +M  AL  A++ A +     PVG+V V N  I   A +     K    HAE LA
Sbjct: 1   MQK-EDYMQLALHLAESVAGQTSPNPPVGSVVVKNGTIAGMAAHLKAGEK----HAERLA 55

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
           +          +    +++VTLEPC        CA  +    I+ +Y  A +P       
Sbjct: 56  VEQAG-----PLAEGAEVFVTLEPCAHYGKTPPCADFLIEKGIKTVYIAALDPNPLVAGK 110

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
           G +    A      ++  GI ++++ ++ + FF
Sbjct: 111 GIEKLRQAG----VKVETGILKEQAEKLYRPFF 139


>gi|27363797|ref|NP_759325.1| riboflavin biosynthesis protein RibD [Vibrio vulnificus CMCP6]
 gi|27359914|gb|AAO08852.1| riboflavin biosynthesis protein RibD [Vibrio vulnificus CMCP6]
          Length = 368

 Score = 98.8 bits (246), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 32/152 (21%), Positives = 50/152 (32%), Gaps = 21/152 (13%)

Query: 4   GNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
               M  A+  A+         P VG V + + +I+    +          HAE+ A+RM
Sbjct: 8   DRQMMLRAIALAKRGLYTTAPNPNVGCVLLRDGEIVGEGFHFRAGE----PHAEVHAMRM 63

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
                          YVTLEPC        CA  +  A + R+     +P       G  
Sbjct: 64  AGDKA-----KGATAYVTLEPCSHYGRTPPCAEGLIKAGVSRVVCAMEDPNPQVAGRGFA 118

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
               A      E+  G+ +  +  +   F K 
Sbjct: 119 MLREAG----IEVSVGLLQAEAEALNPAFIKR 146


>gi|332094564|gb|EGI99610.1| riboflavin biosynthesis protein RibD [Shigella boydii 5216-82]
          Length = 367

 Score = 98.8 bits (246), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 36/155 (23%), Positives = 58/155 (37%), Gaps = 21/155 (13%)

Query: 3   KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +   +M+ AL+ AQ      +  P VG V V + +I+    ++         HAE+ A+R
Sbjct: 2   QDEYYMARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGE----PHAEVHALR 57

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           M               YVTLEPC        C  A+  A + R+     +P       G 
Sbjct: 58  MAGEKA-----KGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVAAMQDPNPQVAGRGL 112

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
                A      ++  G+    + Q+ + F K  R
Sbjct: 113 YRLQQAG----IDVSHGLMMSEAEQLNKGFLKRMR 143


>gi|320181604|gb|EFW56519.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-5-phosphoribosylaminouracil
           reductase [Shigella boydii ATCC 9905]
          Length = 367

 Score = 98.8 bits (246), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 36/155 (23%), Positives = 58/155 (37%), Gaps = 21/155 (13%)

Query: 3   KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +   +M+ AL+ AQ      +  P VG V V + +I+    ++         HAE+ A+R
Sbjct: 2   QDEYYMARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGE----PHAEVHALR 57

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           M               YVTLEPC        C  A+  A + R+     +P       G 
Sbjct: 58  MAGEKA-----KGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVAAMQDPNPQVAGRGL 112

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
                A      ++  G+    + Q+ + F K  R
Sbjct: 113 YRLQQAG----IDVSHGLMMSEAEQLNKGFLKRMR 143


>gi|193212377|ref|YP_001998330.1| riboflavin biosynthesis protein RibD [Chlorobaculum parvum NCIB
           8327]
 gi|193085854|gb|ACF11130.1| riboflavin biosynthesis protein RibD [Chlorobaculum parvum NCIB
           8327]
          Length = 371

 Score = 98.8 bits (246), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 39/157 (24%), Positives = 59/157 (37%), Gaps = 23/157 (14%)

Query: 3   KGNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           +    M   LE A+  A    +   P VG+V V + ++I    ++         HAE  A
Sbjct: 10  EDEGHMRRCLELAERGA--GSVSPNPMVGSVIVHDGRVIGEGWHQKYGG----PHAEPHA 63

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
           I     +  + +L +  LYV LEPC        CA  I    I R+  G  +P       
Sbjct: 64  I---ASVEDEALLRQSTLYVNLEPCSHHGKTPPCADLIVEKCIPRVVVGCLDPHKKVAGK 120

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
           G      A      E+  G+ E  S ++ + F    R
Sbjct: 121 GIARLREAG----VEVTVGVLEAESERLNEAFMTSHR 153


>gi|299136120|ref|ZP_07029304.1| CMP/dCMP deaminase zinc-binding [Acidobacterium sp. MP5ACTX8]
 gi|298602244|gb|EFI58398.1| CMP/dCMP deaminase zinc-binding [Acidobacterium sp. MP5ACTX8]
          Length = 156

 Score = 98.8 bits (246), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 31/142 (21%), Positives = 55/142 (38%), Gaps = 13/142 (9%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +  A+EEA+       IP+GA     +  ++SR  NR  +  D + H E  A R   R  
Sbjct: 15  LRVAIEEARAGLAEGGIPIGAAIFRADGSLVSRGHNRRVQQDDPSIHGETDAFRRAGR-- 72

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
            Q+   ++ +  TL PC  C+  +     + +  G S    GGIE           +   
Sbjct: 73  -QKSYRDLIMVTTLAPCFYCSGLVRQFGFQTVVVGESRTFQGGIEE----LREQGIN--- 124

Query: 127 EIYPGISEQRSRQIIQDFFKER 148
            +   +      +++  +   R
Sbjct: 125 -VID-LDSAECVEMLTGYISAR 144


>gi|74310983|ref|YP_309402.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Shigella sonnei Ss046]
 gi|73854460|gb|AAZ87167.1| bifunctional pyrimidine deaminase/reductase in pathway of
           riboflavin synthesis [Shigella sonnei Ss046]
          Length = 367

 Score = 98.8 bits (246), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 36/155 (23%), Positives = 58/155 (37%), Gaps = 21/155 (13%)

Query: 3   KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +   +M+ AL+ AQ      +  P VG V V + +I+    ++         HAE+ A+R
Sbjct: 2   QDEYYMARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGE----PHAEVHALR 57

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           M               YVTLEPC        C  A+  A + R+     +P       G 
Sbjct: 58  MAGEKA-----KGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVAAMQDPNPQVAGRGL 112

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
                A      ++  G+    + Q+ + F K  R
Sbjct: 113 YRLQQAG----IDVSHGLMMSEAEQLNKGFLKRMR 143


>gi|193065186|ref|ZP_03046259.1| riboflavin biosynthesis protein RibD [Escherichia coli E22]
 gi|194428808|ref|ZP_03061343.1| riboflavin biosynthesis protein RibD [Escherichia coli B171]
 gi|260842612|ref|YP_003220390.1| fused diaminohydroxyphosphoribosylaminopyrimidin e deaminase and
           5-amino-6-(5-phosphoribosylamino) uracil reductase
           [Escherichia coli O103:H2 str. 12009]
 gi|192927160|gb|EDV81781.1| riboflavin biosynthesis protein RibD [Escherichia coli E22]
 gi|194413111|gb|EDX29398.1| riboflavin biosynthesis protein RibD [Escherichia coli B171]
 gi|257757759|dbj|BAI29256.1| fused diaminohydroxyphosphoribosylaminopyrimidin e deaminase and
           5-amino-6-(5-phosphoribosylamino) uracil reductase
           [Escherichia coli O103:H2 str. 12009]
 gi|323160479|gb|EFZ46427.1| riboflavin biosynthesis protein RibD [Escherichia coli E128010]
          Length = 367

 Score = 98.8 bits (246), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 36/155 (23%), Positives = 58/155 (37%), Gaps = 21/155 (13%)

Query: 3   KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +   +M+ AL+ AQ      +  P VG V V + +I+    ++         HAE+ A+R
Sbjct: 2   QDEYYMARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGE----PHAEVHALR 57

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           M               YVTLEPC        C  A+  A + R+     +P       G 
Sbjct: 58  MAGEKA-----KGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVAAMQDPNPQVAGRGL 112

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
                A      ++  G+    + Q+ + F K  R
Sbjct: 113 YRLQQAG----IDVSHGLMMSEAEQLNKGFLKRMR 143


>gi|319942892|ref|ZP_08017175.1| riboflavin biosynthesis protein RibD [Lautropia mirabilis ATCC
           51599]
 gi|319743434|gb|EFV95838.1| riboflavin biosynthesis protein RibD [Lautropia mirabilis ATCC
           51599]
          Length = 385

 Score = 98.8 bits (246), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 33/155 (21%), Positives = 57/155 (36%), Gaps = 23/155 (14%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           +     M  A++ A        +P   VG V V + +++    +R         HAE+LA
Sbjct: 4   EDDRRAMQRAIDLAWQGVNTT-MPNPRVGCVIVRDGEVVGEGWHRRAGE----PHAEVLA 58

Query: 59  IRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIEN 112
           ++        E       YVTLEPC+       CA  +  A + R+     +P       
Sbjct: 59  LQQAG-----ERARGATAYVTLEPCSHHGRTGPCADRLVEAGVARVVAAMEDPNPLVNGQ 113

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
           G      A      ++  G+ E+ +R + + F   
Sbjct: 114 GLGRLRAAG----IDVRCGLLEEEARALNEGFISR 144


>gi|194432577|ref|ZP_03064863.1| riboflavin biosynthesis protein RibD [Shigella dysenteriae 1012]
 gi|194419138|gb|EDX35221.1| riboflavin biosynthesis protein RibD [Shigella dysenteriae 1012]
 gi|332086036|gb|EGI91200.1| riboflavin biosynthesis protein RibD [Shigella dysenteriae 155-74]
          Length = 367

 Score = 98.4 bits (245), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 36/155 (23%), Positives = 58/155 (37%), Gaps = 21/155 (13%)

Query: 3   KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +   +M+ AL+ AQ      +  P VG V V + +I+    ++         HAE+ A+R
Sbjct: 2   QDEYYMARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGE----PHAEVHALR 57

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           M               YVTLEPC        C  A+  A + R+     +P       G 
Sbjct: 58  MAGEKA-----KGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVAAMQDPNPQVAGRGL 112

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
                A      ++  G+    + Q+ + F K  R
Sbjct: 113 YRLQQAG----IDVSHGLMMSEAEQLNKGFLKRMR 143


>gi|167572878|ref|ZP_02365752.1| riboflavin biosynthesis protein RibD [Burkholderia oklahomensis
           C6786]
          Length = 357

 Score = 98.4 bits (245), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 36/148 (24%), Positives = 53/148 (35%), Gaps = 21/148 (14%)

Query: 8   MSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M+ AL  A+      R    VG V     +++    +R         HAE+ A+R     
Sbjct: 1   MAHALRLAEQGLYTTRPNPRVGCVIAHGEQVLGTGWHRRAGE----PHAEVHALREAG-- 54

Query: 66  LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
              E       YVTLEPC        CA A+  A + R+   A +P       G      
Sbjct: 55  ---ERARGATAYVTLEPCAHYGRTPPCANALVAAGVARVVIAARDPFEQVAGRGAARLAD 111

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKE 147
           A       +  G+ E  +R++   FF  
Sbjct: 112 AG----IVVEQGLMEAEARELNIGFFSR 135


>gi|333010856|gb|EGK30282.1| riboflavin biosynthesis protein RibD [Shigella flexneri K-272]
 gi|333021355|gb|EGK40608.1| riboflavin biosynthesis protein RibD [Shigella flexneri K-227]
          Length = 367

 Score = 98.4 bits (245), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 36/155 (23%), Positives = 58/155 (37%), Gaps = 21/155 (13%)

Query: 3   KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +   +M+ AL+ AQ      +  P VG V V + +I+    ++         HAE+ A+R
Sbjct: 2   QDEYYMARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGE----PHAEVHALR 57

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           M               YVTLEPC        C  A+  A + R+     +P       G 
Sbjct: 58  MAGEKA-----KGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVAAMQDPNPQVAGRGL 112

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
                A      ++  G+    + Q+ + F K  R
Sbjct: 113 YRLQQAG----IDVSHGLMMSEAEQLNKGFLKRMR 143


>gi|218698677|ref|YP_002406306.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Escherichia coli IAI39]
 gi|218368663|emb|CAR16402.1| fused diaminohydroxyphosphoribosylaminopyrimidine deaminase;
           5-amino-6-(5-phosphoribosylamino) uracil reductase
           [Escherichia coli IAI39]
          Length = 367

 Score = 98.4 bits (245), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 36/155 (23%), Positives = 58/155 (37%), Gaps = 21/155 (13%)

Query: 3   KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +   +M+ AL+ AQ      +  P VG V V + +I+    ++         HAE+ A+R
Sbjct: 2   QDEYYMARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGE----PHAEVHALR 57

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           M               YVTLEPC        C  A+  A + R+     +P       G 
Sbjct: 58  MAGEKA-----KGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVAAMQDPNPQVAGRGL 112

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
                A      ++  G+    + Q+ + F K  R
Sbjct: 113 YRLQQAG----IDVSHGLMMSEAEQLNKGFLKRMR 143


>gi|24111792|ref|NP_706302.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Shigella flexneri 2a str. 301]
 gi|30061909|ref|NP_836080.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Shigella flexneri 2a str. 2457T]
 gi|24050580|gb|AAN42009.1| bifunctional pyrimidine deaminase/reductase [Shigella flexneri 2a
           str. 301]
 gi|30040153|gb|AAP15886.1| bifunctional pyrimidine deaminase/reductase [Shigella flexneri 2a
           str. 2457T]
 gi|281599746|gb|ADA72730.1| putative Pyrimidine reductase, riboflavin biosynthesis [Shigella
           flexneri 2002017]
 gi|313646969|gb|EFS11426.1| riboflavin biosynthesis protein RibD [Shigella flexneri 2a str.
           2457T]
 gi|332761693|gb|EGJ91972.1| riboflavin biosynthesis protein RibD [Shigella flexneri 2747-71]
 gi|332764291|gb|EGJ94527.1| riboflavin biosynthesis protein RibD [Shigella flexneri K-671]
 gi|332768519|gb|EGJ98702.1| riboflavin biosynthesis protein RibD [Shigella flexneri 2930-71]
 gi|333007890|gb|EGK27366.1| riboflavin biosynthesis protein RibD [Shigella flexneri K-218]
 gi|333022021|gb|EGK41266.1| riboflavin biosynthesis protein RibD [Shigella flexneri K-304]
          Length = 367

 Score = 98.4 bits (245), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 36/155 (23%), Positives = 58/155 (37%), Gaps = 21/155 (13%)

Query: 3   KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +   +M+ AL+ AQ      +  P VG V V + +I+    ++         HAE+ A+R
Sbjct: 2   QDEYYMARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGE----PHAEVHALR 57

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           M               YVTLEPC        C  A+  A + R+     +P       G 
Sbjct: 58  MAGEKA-----KGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVAAMQDPNPQVAGRGL 112

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
                A      ++  G+    + Q+ + F K  R
Sbjct: 113 YRLQQAG----IDVSHGLMMSEAEQLNKGFLKRMR 143


>gi|145632331|ref|ZP_01788066.1| riboflavin biosynthesis protein RibD [Haemophilus influenzae 3655]
 gi|144987238|gb|EDJ93768.1| riboflavin biosynthesis protein RibD [Haemophilus influenzae 3655]
          Length = 372

 Score = 98.4 bits (245), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 35/156 (22%), Positives = 56/156 (35%), Gaps = 21/156 (13%)

Query: 2   KKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
            +  VFM  AL+ A          P VG V V N +I+    +   +      HAE +A+
Sbjct: 6   SQDCVFMQRALDLAAKGQYTTTPNPSVGCVLVKNGEIVGEGFH--FKAGQP--HAERVAL 61

Query: 60  RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113
                    E       YVTLEPC        CA  +  A + ++     +P       G
Sbjct: 62  AQAG-----ENSKGATAYVTLEPCSHYGRTPPCALGLIEAGVVKVIAAMQDPNPQVAGKG 116

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +  + A    +      +   ++ +I + F K  R
Sbjct: 117 LKMLSDAGIESAVN----LLNDQAEKINKGFLKRMR 148


>gi|148826406|ref|YP_001291159.1| formamidopyrimidine-DNA glycosylase [Haemophilus influenzae PittEE]
 gi|229846003|ref|ZP_04466115.1| formamidopyrimidine-DNA glycosylase [Haemophilus influenzae 7P49H1]
 gi|148716566|gb|ABQ98776.1| formamidopyrimidine-DNA glycosylase [Haemophilus influenzae PittEE]
 gi|229811007|gb|EEP46724.1| formamidopyrimidine-DNA glycosylase [Haemophilus influenzae 7P49H1]
 gi|309973554|gb|ADO96755.1| Riboflavin biosynthesis protein RibD [Haemophilus influenzae R2846]
          Length = 372

 Score = 98.4 bits (245), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 35/156 (22%), Positives = 56/156 (35%), Gaps = 21/156 (13%)

Query: 2   KKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
            +  VFM  AL+ A          P VG V V N +I+    +   +      HAE +A+
Sbjct: 6   SQDCVFMQRALDLAAKGQYTTTPNPSVGCVLVKNGEIVGEGFH--FKAGQP--HAERVAL 61

Query: 60  RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113
                    E       YVTLEPC        CA  +  A + ++     +P       G
Sbjct: 62  AQAG-----ENSKGATAYVTLEPCSHYGRTPPCALGLIEAGVVKVIAAMQDPNPQVAGKG 116

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +  + A    +      +   ++ +I + F K  R
Sbjct: 117 LKMLSDAGIESAVN----LLNDQAEKINKGFLKRMR 148


>gi|260581778|ref|ZP_05849575.1| riboflavin biosynthesis protein RibD [Haemophilus influenzae NT127]
 gi|260095371|gb|EEW79262.1| riboflavin biosynthesis protein RibD [Haemophilus influenzae NT127]
          Length = 372

 Score = 98.4 bits (245), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 35/156 (22%), Positives = 56/156 (35%), Gaps = 21/156 (13%)

Query: 2   KKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
            +  VFM  AL+ A          P VG V V N +I+    +   +      HAE +A+
Sbjct: 6   SQDCVFMQRALDLAAKGQYTTTPNPSVGCVLVKNGEIVGEGFH--FKAGQP--HAERVAL 61

Query: 60  RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113
                    E       YVTLEPC        CA  +  A + ++     +P       G
Sbjct: 62  AQAG-----ENSKGATAYVTLEPCSHYGRTPPCALGLIEAGVVKVIAAMQDPNPQVAGKG 116

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +  + A    +      +   ++ +I + F K  R
Sbjct: 117 LKMLSDAGIESAVN----LLSDQAEKINKGFLKRMR 148


>gi|300918206|ref|ZP_07134813.1| riboflavin biosynthesis protein RibD [Escherichia coli MS 115-1]
 gi|300414657|gb|EFJ97967.1| riboflavin biosynthesis protein RibD [Escherichia coli MS 115-1]
          Length = 367

 Score = 98.4 bits (245), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 36/155 (23%), Positives = 58/155 (37%), Gaps = 21/155 (13%)

Query: 3   KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +   +M+ AL+ AQ      +  P VG V V + +I+    ++         HAE+ A+R
Sbjct: 2   QDEYYMARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGE----PHAEVHALR 57

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           M               YVTLEPC        C  A+  A + R+     +P       G 
Sbjct: 58  MAGEKA-----KGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVAAMQDPNPQVAGRGL 112

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
                A      ++  G+    + Q+ + F K  R
Sbjct: 113 YRLQQAG----IDVSHGLMMSEAEQLNKGFLKRMR 143


>gi|114765713|ref|ZP_01444811.1| putative deaminase [Pelagibaca bermudensis HTCC2601]
 gi|114541930|gb|EAU44965.1| putative deaminase [Roseovarius sp. HTCC2601]
          Length = 152

 Score = 98.4 bits (245), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 36/131 (27%), Positives = 57/131 (43%), Gaps = 6/131 (4%)

Query: 10  CALEEAQNAALRNEIPVG-AVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQ 68
            A   A+      E PV  A  +  +++++ + N   E  D + HAEI+AI    R L  
Sbjct: 15  IAAALAR--FSPGEGPVFTAAVLRGDEVLALSANEVSERCDASRHAEIVAIETASRKLGS 72

Query: 69  EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASN---PKGGGIENGTQFYTLATCHHS 125
             L    L  +++PC MC AA+  A I RL +  +    P      N T       C H+
Sbjct: 73  TKLDGCTLIASMQPCEMCLAAMRWAGIDRLVFAMTQELAPTFFQFPNLTIADYARACDHA 132

Query: 126 PEIYPGISEQR 136
            + + G+  +R
Sbjct: 133 FDWHGGLGAER 143


>gi|301049614|ref|ZP_07196565.1| riboflavin biosynthesis protein RibD [Escherichia coli MS 185-1]
 gi|300298607|gb|EFJ54992.1| riboflavin biosynthesis protein RibD [Escherichia coli MS 185-1]
          Length = 367

 Score = 98.4 bits (245), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 36/155 (23%), Positives = 58/155 (37%), Gaps = 21/155 (13%)

Query: 3   KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +   +M+ AL+ AQ      +  P VG V V + +I+    ++         HAE+ A+R
Sbjct: 2   QDEYYMARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGE----PHAEVHALR 57

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           M               YVTLEPC        C  A+  A + R+     +P       G 
Sbjct: 58  MAGEKA-----KGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVAAMQDPNPQVAGRGL 112

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
                A      ++  G+    + Q+ + F K  R
Sbjct: 113 YRLQQAG----IDVSHGLMMSEAEQLNKGFLKRMR 143


>gi|26246419|ref|NP_752458.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Escherichia coli CFT073]
 gi|191173514|ref|ZP_03035041.1| riboflavin biosynthesis protein RibD [Escherichia coli F11]
 gi|218688277|ref|YP_002396489.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Escherichia coli ED1a]
 gi|227884578|ref|ZP_04002383.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Escherichia coli 83972]
 gi|300988034|ref|ZP_07178514.1| riboflavin biosynthesis protein RibD [Escherichia coli MS 45-1]
 gi|300997399|ref|ZP_07181739.1| riboflavin biosynthesis protein RibD [Escherichia coli MS 200-1]
 gi|331645587|ref|ZP_08346691.1| riboflavin biosynthesis protein RibD [Escherichia coli M605]
 gi|26106817|gb|AAN79002.1|AE016756_185 Riboflavin biosynthesis protein ribD [Escherichia coli CFT073]
 gi|190906223|gb|EDV65835.1| riboflavin biosynthesis protein RibD [Escherichia coli F11]
 gi|218425841|emb|CAR06647.1| fused diaminohydroxyphosphoribosylaminopyrimidine deaminase;
           5-amino-6-(5-phosphoribosylamino) uracil reductase
           [Escherichia coli ED1a]
 gi|222032209|emb|CAP74948.1| riboflavin biosynthesis protein ribD [Escherichia coli LF82]
 gi|227838664|gb|EEJ49130.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Escherichia coli 83972]
 gi|281177584|dbj|BAI53914.1| pyrimidine deaminase/reductase [Escherichia coli SE15]
 gi|300304218|gb|EFJ58738.1| riboflavin biosynthesis protein RibD [Escherichia coli MS 200-1]
 gi|300407586|gb|EFJ91124.1| riboflavin biosynthesis protein RibD [Escherichia coli MS 45-1]
 gi|312944991|gb|ADR25818.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Escherichia coli O83:H1 str. NRG 857C]
 gi|315294207|gb|EFU53558.1| riboflavin biosynthesis protein RibD [Escherichia coli MS 153-1]
 gi|324010091|gb|EGB79310.1| riboflavin biosynthesis protein RibD [Escherichia coli MS 57-2]
 gi|324010674|gb|EGB79893.1| riboflavin biosynthesis protein RibD [Escherichia coli MS 60-1]
 gi|330910208|gb|EGH38718.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Escherichia
           coli AA86]
 gi|331045749|gb|EGI17875.1| riboflavin biosynthesis protein RibD [Escherichia coli M605]
          Length = 367

 Score = 98.4 bits (245), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 36/155 (23%), Positives = 58/155 (37%), Gaps = 21/155 (13%)

Query: 3   KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +   +M+ AL+ AQ      +  P VG V V + +I+    ++         HAE+ A+R
Sbjct: 2   QDEYYMARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGE----PHAEVHALR 57

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           M               YVTLEPC        C  A+  A + R+     +P       G 
Sbjct: 58  MAGEKA-----KGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVAAMQDPNPQVAGRGL 112

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
                A      ++  G+    + Q+ + F K  R
Sbjct: 113 YRLQQAG----IDVSHGLMMSEAEQLNKGFLKRMR 143


>gi|320197148|gb|EFW71765.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-5-phosphoribosylaminouracil
           reductase [Escherichia coli WV_060327]
          Length = 367

 Score = 98.4 bits (245), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 36/155 (23%), Positives = 58/155 (37%), Gaps = 21/155 (13%)

Query: 3   KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +   +M+ AL+ AQ      +  P VG V V + +I+    ++         HAE+ A+R
Sbjct: 2   QDEYYMARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGE----PHAEVHALR 57

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           M               YVTLEPC        C  A+  A + R+     +P       G 
Sbjct: 58  MAGEKA-----KGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVAAMQDPNPQVAGRGL 112

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
                A      ++  G+    + Q+ + F K  R
Sbjct: 113 YRLQQAG----IDVSHGLMMSEAEQLNKGFLKRMR 143


>gi|26522770|dbj|BAC44857.1| pyrimidine deaminase/ pyrimidine reductase [Vibrio fischeri]
          Length = 372

 Score = 98.4 bits (245), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 33/151 (21%), Positives = 53/151 (35%), Gaps = 21/151 (13%)

Query: 2   KKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
            + ++ M  A+  A+         P VG V V + KI+    +          HAE+ A+
Sbjct: 5   TQDHLMMQKAILLAKQGIYTTAPNPNVGCVLVKDGKIVGEGAHLKAGE----PHAEVHAL 60

Query: 60  RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113
           R   +            YVTLEPC        CA  +  A ++++     +P       G
Sbjct: 61  RQAGKEAQ-----GATAYVTLEPCSHYGRTPPCAEGLIKAGVKKVICAMVDPNPQVAGRG 115

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
                 A      E   G+ E  +R +   F
Sbjct: 116 LAMLNEAG----IETASGLLEADARALNPHF 142


>gi|322381771|ref|ZP_08055725.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase-like
           protein/5-amino-6-(5-phosphoribosylamino) uracil
           reductase-like protein [Paenibacillus larvae subsp.
           larvae B-3650]
 gi|321154159|gb|EFX46481.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase-like
           protein/5-amino-6-(5-phosphoribosylamino) uracil
           reductase-like protein [Paenibacillus larvae subsp.
           larvae B-3650]
          Length = 362

 Score = 98.4 bits (245), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 31/139 (22%), Positives = 54/139 (38%), Gaps = 21/139 (15%)

Query: 14  EAQNAALRNEI-PV-GAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEIL 71
            A+ A  +  + PV G V V + +II    + +R       HAE+ A++M          
Sbjct: 1   MAKGAKGQTGVNPVVGCVLVKDGRIIGMGAHLHRGQG----HAEVHALQMAGAEA----- 51

Query: 72  PEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
                YVTLEPC        C+  +    ++R+   A +P       G +    A     
Sbjct: 52  EGSTAYVTLEPCSHFGKTPPCSGRLIDHGVKRVVIAAVDPNPQVAGAGIERLRSAG---- 107

Query: 126 PEIYPGISEQRSRQIIQDF 144
            E+  G+  + +  + + F
Sbjct: 108 IEVDVGLLAEEASAMNEAF 126


>gi|90579822|ref|ZP_01235630.1| Putative pyrimidine deaminase/pyrimidine reductase [Vibrio angustum
           S14]
 gi|90438707|gb|EAS63890.1| Putative pyrimidine deaminase/pyrimidine reductase [Vibrio angustum
           S14]
          Length = 374

 Score = 98.4 bits (245), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 30/152 (19%), Positives = 55/152 (36%), Gaps = 21/152 (13%)

Query: 4   GNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
               M  A++ A+         P VG V    ++I+    +          HAE+ A++ 
Sbjct: 6   DTRLMLRAIQLAKRGCFTTAPNPNVGCVIANGDEILGEGFHYRAGE----PHAEVFALKQ 61

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
                          YVTLEPC        CA A+  + + R+     +P       G +
Sbjct: 62  AG-----VRAKGATAYVTLEPCSHYGRTPPCAEALIKSGVSRVICAMVDPNPLVAGRGVE 116

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
               A      ++  G+ ++ ++ I + F K+
Sbjct: 117 MLQKAG----VDVQVGLLKEEAQAINKAFIKQ 144


>gi|82775681|ref|YP_402028.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Shigella dysenteriae Sd197]
 gi|309787001|ref|ZP_07681613.1| riboflavin biosynthesis protein RibD [Shigella dysenteriae 1617]
 gi|81239829|gb|ABB60539.1| bifunctional pyrimidine deaminase/reductase [Shigella dysenteriae
           Sd197]
 gi|308924579|gb|EFP70074.1| riboflavin biosynthesis protein RibD [Shigella dysenteriae 1617]
          Length = 367

 Score = 98.4 bits (245), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 36/155 (23%), Positives = 58/155 (37%), Gaps = 21/155 (13%)

Query: 3   KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +   +M+ AL+ AQ      +  P VG V V + +I+    ++         HAE+ A+R
Sbjct: 2   QDEYYMARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGE----PHAEVHALR 57

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           M               YVTLEPC        C  A+  A + R+     +P       G 
Sbjct: 58  MAGEKA-----KGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVAAMQDPNPQVAGRGL 112

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
                A      ++  G+    + Q+ + F K  R
Sbjct: 113 YRLQQAG----IDVSHGLMMSEAEQLNKGFLKRMR 143


>gi|125972628|ref|YP_001036538.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase /
           diaminohydroxyphosphoribosylaminopyrimidine deaminase
           [Clostridium thermocellum ATCC 27405]
 gi|125712853|gb|ABN51345.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Clostridium
           thermocellum ATCC 27405]
          Length = 365

 Score = 98.4 bits (245), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 36/130 (27%), Positives = 53/130 (40%), Gaps = 17/130 (13%)

Query: 1   MKKGNVFMSCALEEAQNAA-LRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           M +   FMS A++ A+      N  P VGAV V + KII+   ++  +L     HAE+ A
Sbjct: 1   MSEKEFFMSRAIKLAKLGWGKTNPNPLVGAVVVKDGKIIAEGYHK--QLGGP--HAEVEA 56

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
                    +E +    LYV LEPC        CA  I    I+++     +P       
Sbjct: 57  FNNA-----KEDVAGGTLYVNLEPCSHYGRTPPCAQKIIDVGIKKVVAAIKDPNPKVSGR 111

Query: 113 GTQFYTLATC 122
           G +    A  
Sbjct: 112 GFEMLKNAGI 121


>gi|45659288|ref|YP_003374.1| cytidine deaminase [Leptospira interrogans serovar Copenhageni str.
           Fiocruz L1-130]
 gi|45602534|gb|AAS72011.1| cytidine deaminase [Leptospira interrogans serovar Copenhageni str.
           Fiocruz L1-130]
          Length = 201

 Score = 98.4 bits (245), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 42/129 (32%), Positives = 61/129 (47%), Gaps = 2/129 (1%)

Query: 21  RNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80
           R EIP         K+IS   N   +  D + H+EIL IR     L    L +  L  +L
Sbjct: 71  REEIPSFTRIYHKEKLISETFNEVEKKSDSSFHSEILCIRNAKEKLKTRYLADCMLITSL 130

Query: 81  EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140
           EPC MCA  I L+RI ++ Y     +G GI +      + + +  PE++  I  + S+  
Sbjct: 131 EPCLMCAGTILLSRIPKVVYLLPAKQGEGISS-LSIEMIYSRNFFPELFC-IPTEISKNA 188

Query: 141 IQDFFKERR 149
            + FFK RR
Sbjct: 189 FKSFFKVRR 197


>gi|145640611|ref|ZP_01796194.1| riboflavin biosynthesis protein RibD [Haemophilus influenzae R3021]
 gi|145274537|gb|EDK14400.1| riboflavin biosynthesis protein RibD [Haemophilus influenzae
           22.4-21]
          Length = 250

 Score = 98.4 bits (245), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 35/156 (22%), Positives = 56/156 (35%), Gaps = 21/156 (13%)

Query: 2   KKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
            +  VFM  AL+ A          P VG V V N +I+    +   +      HAE +A+
Sbjct: 6   SQDCVFMQRALDLAAKGQYTTTPNPSVGCVLVKNGEIVGEGFH--FKAGQP--HAERVAL 61

Query: 60  RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113
                    E       YVTLEPC        CA  +  A + ++     +P       G
Sbjct: 62  AQAG-----ENSKGATAYVTLEPCSHYGRTPPCALGLIEAGVVKVIAAMQDPNPQVAGKG 116

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +  + A    +      +   ++ +I + F K  R
Sbjct: 117 LKMLSDAGIESAVN----LLNDQAEKINKGFLKRMR 148


>gi|293413668|ref|ZP_06656317.1| riboflavin biosynthesis protein RibD [Escherichia coli B185]
 gi|291433726|gb|EFF06699.1| riboflavin biosynthesis protein RibD [Escherichia coli B185]
          Length = 367

 Score = 98.1 bits (244), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 36/155 (23%), Positives = 58/155 (37%), Gaps = 21/155 (13%)

Query: 3   KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +   +M+ AL+ AQ      +  P VG V V + +I+    ++         HAE+ A+R
Sbjct: 2   QDEYYMARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGE----PHAEVHALR 57

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           M               YVTLEPC        C  A+  A + R+     +P       G 
Sbjct: 58  MAGEKA-----KGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVAAMQDPNPQVAGRGL 112

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
                A      ++  G+    + Q+ + F K  R
Sbjct: 113 YRLQQAG----IDVSHGLMMSEAEQLNKGFLKRMR 143


>gi|149001717|ref|ZP_01826690.1| Holliday junction DNA helicase motor protein [Streptococcus
           pneumoniae SP14-BS69]
 gi|147760175|gb|EDK67164.1| Holliday junction DNA helicase motor protein [Streptococcus
           pneumoniae SP14-BS69]
          Length = 341

 Score = 98.1 bits (244), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 34/125 (27%), Positives = 48/125 (38%), Gaps = 19/125 (15%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC-- 83
           VGAV V +N II +  +          HAE  A++  CR           LYVTLEPC  
Sbjct: 2   VGAVIVKDNHIIGQGYHEFFGG----PHAERNALKN-CRESP----VGATLYVTLEPCCH 52

Query: 84  ----TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139
                 C  AI  + I R+  G+ +        G +           ++  GI E     
Sbjct: 53  FGKTPPCIDAIIDSGITRVVIGSLDCNPIVSGKGVKILEENNL----QVTVGILENECLN 108

Query: 140 IIQDF 144
           +I+ F
Sbjct: 109 LIKSF 113


>gi|282863790|ref|ZP_06272848.1| CMP/dCMP deaminase zinc-binding [Streptomyces sp. ACTE]
 gi|282561491|gb|EFB67035.1| CMP/dCMP deaminase zinc-binding [Streptomyces sp. ACTE]
          Length = 142

 Score = 98.1 bits (244), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 26/102 (25%), Positives = 44/102 (43%), Gaps = 1/102 (0%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRM 61
             +  +  A+  A  A    + P G++    +  +++   N      D+TAH E+   R 
Sbjct: 5   DDHTLLRRAIALAAEAREGGDPPFGSLLSGPDGTVLAEERNTTLTDGDITAHPELKLARW 64

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
             R L      E  +Y + +PC MC A I  A +RR+ +  S
Sbjct: 65  AARELDAATAAETTMYTSCQPCEMCQAVIQRAGLRRVVFALS 106


>gi|317154507|ref|YP_004122555.1| riboflavin biosynthesis protein RibD [Desulfovibrio aespoeensis
           Aspo-2]
 gi|316944758|gb|ADU63809.1| riboflavin biosynthesis protein RibD [Desulfovibrio aespoeensis
           Aspo-2]
          Length = 377

 Score = 98.1 bits (244), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 33/147 (22%), Positives = 53/147 (36%), Gaps = 23/147 (15%)

Query: 8   MSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
           M+ A+E A+    R  +   P VGAV V  ++I++   +          HAE   +    
Sbjct: 14  MARAIELARLG--RGAVAPNPCVGAVLVDGDRIVAEGWHMRYGGL----HAERECLVDAR 67

Query: 64  RILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFY 117
                     + ++VTLEPC        C  A+    + R+  G  +P         +  
Sbjct: 68  SKGVTPR--GLTMFVTLEPCNHHGKTPPCTQALIEEGVARVVVGTRDPNPVAAGGIERLT 125

Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDF 144
                    E+  G  E   R +I DF
Sbjct: 126 AA-----GIEVEVGALESECRDLIADF 147


>gi|261211387|ref|ZP_05925675.1| diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Vibrio sp. RC341]
 gi|260839342|gb|EEX65968.1| diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Vibrio sp. RC341]
          Length = 367

 Score = 98.1 bits (244), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 35/152 (23%), Positives = 54/152 (35%), Gaps = 21/152 (13%)

Query: 4   GNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
            +  MS A+E A       +  P VG V     +I+    +          HAE+ A+R 
Sbjct: 8   DHQMMSRAIELAWRGRFTTSPNPNVGCVITRGEQIVGEGFHFRAGE----PHAEVHAMRQ 63

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
              +           YVTLEPC        CA  +  A + ++     +P       G Q
Sbjct: 64  AGELT-----RGATAYVTLEPCSHYGRTPPCAEGLIQAGVAKVICAMQDPNPQVAGRGVQ 118

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
               A      E+  G+ E  +R + + F K 
Sbjct: 119 MLRDAG----IEVEVGLLEADARALNRGFLKR 146


>gi|94264512|ref|ZP_01288299.1| Riboflavin biosynthesis protein RibD:Riboflavin-specific
           deaminase-like [delta proteobacterium MLMS-1]
 gi|93455071|gb|EAT05298.1| Riboflavin biosynthesis protein RibD:Riboflavin-specific
           deaminase-like [delta proteobacterium MLMS-1]
          Length = 374

 Score = 98.1 bits (244), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 38/152 (25%), Positives = 57/152 (37%), Gaps = 22/152 (14%)

Query: 4   GNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
              +M  AL EA+         P VGAV V N +++ +  +R         HA       
Sbjct: 5   DLTYMRLALAEARKGVGKTAPNPCVGAVVVKNGRVVGKGWHRKIGQ----PHA-----EA 55

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
                + E      +YVTLEPC        C+ AI  A IRR+ YG ++P         +
Sbjct: 56  EALRAAGEAAAGATIYVTLEPCNHLGRTPPCSEAIIAAGIRRVVYGLADPHEVARGGAKR 115

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
             +        E+  G+     R++   F K 
Sbjct: 116 LESA-----GLEVLGGVLADECRRLNLPFIKR 142


>gi|254361993|ref|ZP_04978124.1| bifunctional 5-amino-6-(5-phosphoribosylamino)uracil reductase/
           diaminohydroxyphosphoribosylaminopyrimidine deaminase
           [Mannheimia haemolytica PHL213]
 gi|153093540|gb|EDN74520.1| bifunctional 5-amino-6-(5-phosphoribosylamino)uracil reductase/
           diaminohydroxyphosphoribosylaminopyrimidine deaminase
           [Mannheimia haemolytica PHL213]
          Length = 359

 Score = 98.1 bits (244), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 37/148 (25%), Positives = 56/148 (37%), Gaps = 25/148 (16%)

Query: 8   MSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
           M+ A+  A+ A  R      P VG V V N  II+   ++    K  + HAE  AI    
Sbjct: 1   MAYAITLAEKA--RGWTSPNPLVGCVIVKNGNIIAEGYHQ----KAGSWHAERNAI---- 50

Query: 64  RILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFY 117
            +  +E L     YVTLEPC        C+  +    I++++ G+ +P       G    
Sbjct: 51  -LNCEEDLTGATAYVTLEPCCHHGRTPPCSELLIERGIKKVFIGSRDPNPLVSGKGAAQL 109

Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDFF 145
             A      E+           +   FF
Sbjct: 110 RAAG----IEVVEDFMRTECDALNPIFF 133


>gi|225023912|ref|ZP_03713104.1| hypothetical protein EIKCOROL_00778 [Eikenella corrodens ATCC
           23834]
 gi|224943386|gb|EEG24595.1| hypothetical protein EIKCOROL_00778 [Eikenella corrodens ATCC
           23834]
          Length = 364

 Score = 98.1 bits (244), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 34/149 (22%), Positives = 55/149 (36%), Gaps = 21/149 (14%)

Query: 4   GNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
            +  M  A+  A       +  P VG V     +I+ +  +          HAE+ A+R 
Sbjct: 8   DHALMQQAIALAWQGRFSTSPNPRVGCVIAQGGQIVGQGFHLKAGE----PHAEVHALRQ 63

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
                          YVTLEPC        CA A+  A +RR+     +P    +  G  
Sbjct: 64  AGSAAQ-----GATAYVTLEPCAHHGRTPPCAEALIRAGVRRVVAAMQDPNPLVVGKGLA 118

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDF 144
               A      ++  G+ E+ +RQ+ + F
Sbjct: 119 ILEAAG----IQVACGLMEREARQLNRGF 143


>gi|156030997|ref|XP_001584824.1| hypothetical protein SS1G_14279 [Sclerotinia sclerotiorum 1980]
 gi|154700670|gb|EDO00409.1| hypothetical protein SS1G_14279 [Sclerotinia sclerotiorum 1980
           UF-70]
          Length = 152

 Score = 98.1 bits (244), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 29/140 (20%), Positives = 51/140 (36%), Gaps = 18/140 (12%)

Query: 10  CALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQ 68
            A+EEA+       +P+GA  V    K++ R  N   +      H E  A+    R+ + 
Sbjct: 12  IAVEEAKIGYEEGGVPIGAALVSREGKLLGRGHNMRVQKGSAIHHGETSALENSGRLPAS 71

Query: 69  EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEI 128
                  +Y T         A  L  I R+  G +N   GG     Q           E+
Sbjct: 72  AY-KGSTMYTT-------TGACLLYGISRVVVGENNTFLGGEAYLKQ--------RGIEV 115

Query: 129 YPGISEQRSRQIIQDFFKER 148
              +  +  +++++ F  E+
Sbjct: 116 V-NMQSKECQELMERFISEK 134


>gi|15800143|ref|NP_286155.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Escherichia coli O157:H7 EDL933]
 gi|15829721|ref|NP_308494.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Escherichia coli O157:H7 str. Sakai]
 gi|168749873|ref|ZP_02774895.1| riboflavin biosynthesis protein RibD [Escherichia coli O157:H7 str.
           EC4113]
 gi|168756953|ref|ZP_02781960.1| riboflavin biosynthesis protein RibD [Escherichia coli O157:H7 str.
           EC4401]
 gi|168761617|ref|ZP_02786624.1| riboflavin biosynthesis protein RibD [Escherichia coli O157:H7 str.
           EC4501]
 gi|168768362|ref|ZP_02793369.1| riboflavin biosynthesis protein RibD [Escherichia coli O157:H7 str.
           EC4486]
 gi|168776283|ref|ZP_02801290.1| riboflavin biosynthesis protein RibD [Escherichia coli O157:H7 str.
           EC4196]
 gi|168783277|ref|ZP_02808284.1| riboflavin biosynthesis protein RibD [Escherichia coli O157:H7 str.
           EC4076]
 gi|168786258|ref|ZP_02811265.1| riboflavin biosynthesis protein RibD [Escherichia coli O157:H7 str.
           EC869]
 gi|168800294|ref|ZP_02825301.1| riboflavin biosynthesis protein RibD [Escherichia coli O157:H7 str.
           EC508]
 gi|195938521|ref|ZP_03083903.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Escherichia coli O157:H7 str. EC4024]
 gi|208806179|ref|ZP_03248516.1| riboflavin biosynthesis protein RibD [Escherichia coli O157:H7 str.
           EC4206]
 gi|208815640|ref|ZP_03256819.1| riboflavin biosynthesis protein RibD [Escherichia coli O157:H7 str.
           EC4045]
 gi|208822832|ref|ZP_03263150.1| riboflavin biosynthesis protein RibD [Escherichia coli O157:H7 str.
           EC4042]
 gi|209395713|ref|YP_002269058.1| riboflavin biosynthesis protein RibD [Escherichia coli O157:H7 str.
           EC4115]
 gi|217325532|ref|ZP_03441616.1| riboflavin biosynthesis protein RibD [Escherichia coli O157:H7 str.
           TW14588]
 gi|254791597|ref|YP_003076434.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Escherichia coli O157:H7 str. TW14359]
 gi|261223893|ref|ZP_05938174.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase
           [Escherichia coli O157:H7 str. FRIK2000]
 gi|261256393|ref|ZP_05948926.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase
           [Escherichia coli O157:H7 str. FRIK966]
 gi|291281320|ref|YP_003498138.1| Bifunctional deaminase-reductase, C-terminal:Riboflavin
           biosynthesis protein RibD [Escherichia coli O55:H7 str.
           CB9615]
 gi|12513266|gb|AAG54763.1|AE005220_12 bifunctional pyrimidine deaminase/reductase in pathway of
           riboflavin synthesis [Escherichia coli O157:H7 str.
           EDL933]
 gi|13359924|dbj|BAB33890.1| bifunctional pyrimidine deaminase/reductase in pathway of
           riboflavin synthesis [Escherichia coli O157:H7 str.
           Sakai]
 gi|187768260|gb|EDU32104.1| riboflavin biosynthesis protein RibD [Escherichia coli O157:H7 str.
           EC4196]
 gi|188015886|gb|EDU54008.1| riboflavin biosynthesis protein RibD [Escherichia coli O157:H7 str.
           EC4113]
 gi|188999379|gb|EDU68365.1| riboflavin biosynthesis protein RibD [Escherichia coli O157:H7 str.
           EC4076]
 gi|189355992|gb|EDU74411.1| riboflavin biosynthesis protein RibD [Escherichia coli O157:H7 str.
           EC4401]
 gi|189362505|gb|EDU80924.1| riboflavin biosynthesis protein RibD [Escherichia coli O157:H7 str.
           EC4486]
 gi|189368039|gb|EDU86455.1| riboflavin biosynthesis protein RibD [Escherichia coli O157:H7 str.
           EC4501]
 gi|189373620|gb|EDU92036.1| riboflavin biosynthesis protein RibD [Escherichia coli O157:H7 str.
           EC869]
 gi|189377412|gb|EDU95828.1| riboflavin biosynthesis protein RibD [Escherichia coli O157:H7 str.
           EC508]
 gi|208725980|gb|EDZ75581.1| riboflavin biosynthesis protein RibD [Escherichia coli O157:H7 str.
           EC4206]
 gi|208732288|gb|EDZ80976.1| riboflavin biosynthesis protein RibD [Escherichia coli O157:H7 str.
           EC4045]
 gi|208737025|gb|EDZ84709.1| riboflavin biosynthesis protein RibD [Escherichia coli O157:H7 str.
           EC4042]
 gi|209157113|gb|ACI34546.1| riboflavin biosynthesis protein RibD [Escherichia coli O157:H7 str.
           EC4115]
 gi|209744084|gb|ACI70349.1| bifunctional pyrimidine deaminase/reductase in pathway of
           riboflavin synthesis [Escherichia coli]
 gi|209744086|gb|ACI70350.1| bifunctional pyrimidine deaminase/reductase in pathway of
           riboflavin synthesis [Escherichia coli]
 gi|209744088|gb|ACI70351.1| bifunctional pyrimidine deaminase/reductase in pathway of
           riboflavin synthesis [Escherichia coli]
 gi|209744090|gb|ACI70352.1| bifunctional pyrimidine deaminase/reductase in pathway of
           riboflavin synthesis [Escherichia coli]
 gi|209744092|gb|ACI70353.1| bifunctional pyrimidine deaminase/reductase in pathway of
           riboflavin synthesis [Escherichia coli]
 gi|217321753|gb|EEC30177.1| riboflavin biosynthesis protein RibD [Escherichia coli O157:H7 str.
           TW14588]
 gi|254590997|gb|ACT70358.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase
           [Escherichia coli O157:H7 str. TW14359]
 gi|290761193|gb|ADD55154.1| Bifunctional deaminase-reductase, C-terminal:Riboflavin
           biosynthesis protein RibD [Escherichia coli O55:H7 str.
           CB9615]
 gi|320192827|gb|EFW67467.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-5-phosphoribosylaminouracil
           reductase [Escherichia coli O157:H7 str. EC1212]
 gi|320638406|gb|EFX08120.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Escherichia coli O157:H7 str. G5101]
 gi|320643786|gb|EFX12909.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Escherichia coli O157:H- str. 493-89]
 gi|320649137|gb|EFX17715.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Escherichia coli O157:H- str. H 2687]
 gi|326341175|gb|EGD64967.1| riboflavin biosynthesis protein RibD [Escherichia coli O157:H7 str.
           1044]
 gi|326346050|gb|EGD69789.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-5-phosphoribosylaminouracil
           reductase [Escherichia coli O157:H7 str. 1125]
          Length = 367

 Score = 98.1 bits (244), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 36/155 (23%), Positives = 58/155 (37%), Gaps = 21/155 (13%)

Query: 3   KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +   +M+ AL+ AQ      +  P VG V V + +I+    ++         HAE+ A+R
Sbjct: 2   QDEYYMARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGE----PHAEVHALR 57

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           M               YVTLEPC        C  A+  A + R+     +P       G 
Sbjct: 58  MAGEKA-----KGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVAAMQDPNPQVAGRGL 112

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
                A      ++  G+    + Q+ + F K  R
Sbjct: 113 YRLQQAG----IDVSHGLMMSEAEQLNKGFLKRMR 143


>gi|331671959|ref|ZP_08372755.1| riboflavin biosynthesis protein RibD [Escherichia coli TA280]
 gi|331070948|gb|EGI42307.1| riboflavin biosynthesis protein RibD [Escherichia coli TA280]
          Length = 367

 Score = 98.1 bits (244), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 36/155 (23%), Positives = 58/155 (37%), Gaps = 21/155 (13%)

Query: 3   KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +   +M+ AL+ AQ      +  P VG V V + +I+    ++         HAE+ A+R
Sbjct: 2   QDEYYMARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGE----PHAEVHALR 57

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           M               YVTLEPC        C  A+  A + R+     +P       G 
Sbjct: 58  MAGEKA-----KGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVAAMQDPNPQVAGRGL 112

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
                A      ++  G+    + Q+ + F K  R
Sbjct: 113 YRLQQAG----IDVSHGLMMSEAEQLNKGFLKRMR 143


>gi|258645658|ref|ZP_05733127.1| riboflavin biosynthesis protein RibD [Dialister invisus DSM 15470]
 gi|260403024|gb|EEW96571.1| riboflavin biosynthesis protein RibD [Dialister invisus DSM 15470]
          Length = 434

 Score = 98.1 bits (244), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 40/154 (25%), Positives = 57/154 (37%), Gaps = 21/154 (13%)

Query: 1   MKKGNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           +     FM+ ALE A N     R    VGAV V + +II    +          HAE+ A
Sbjct: 3   IDDDKKFMARALELAANGMGHTRPNPMVGAVLVKDGEIIGEGWHEFYGG----PHAEVNA 58

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
               CR           LYVTLEPC        CA  I    + R+     +P       
Sbjct: 59  F-ADCRADP----AGATLYVTLEPCCHYGKTPPCADLIVSKNLERVVVAMQDPNPLVSGK 113

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
           G +    A       +  G+ E+ ++ + + F K
Sbjct: 114 GIRKLKDAGIF----VTTGVMEKEAQVLNEVFMK 143


>gi|148255996|ref|YP_001240581.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase /
           diaminohydroxyphosphoribosylaminopyrimidine deaminase
           [Bradyrhizobium sp. BTAi1]
 gi|146408169|gb|ABQ36675.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Bradyrhizobium
           sp. BTAi1]
          Length = 383

 Score = 98.1 bits (244), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 37/154 (24%), Positives = 53/154 (34%), Gaps = 21/154 (13%)

Query: 4   GNVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
              FM  AL   +    R      VGAV V +  I+ R   +         HAE  A+R 
Sbjct: 21  DRRFMQLALALGRRGQGRTWPNPAVGAVVVKDGVIVGRGWTQPGGR----PHAEPEALRR 76

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
                         LYV+LEPC        CA A+  A I R+     +P       G  
Sbjct: 77  AGAAT-----KGATLYVSLEPCSHFGKSPPCADAVIAAGISRVVSAIEDPNPEVSGQGHA 131

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
               A      ++  G+    +++    FF+  R
Sbjct: 132 RLRAAG----IQVEVGLCSADAKRDHAGFFRRIR 161


>gi|145219912|ref|YP_001130621.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase /
           diaminohydroxyphosphoribosylaminopyrimidine deaminase
           [Prosthecochloris vibrioformis DSM 265]
 gi|145206076|gb|ABP37119.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Chlorobium
           phaeovibrioides DSM 265]
          Length = 357

 Score = 98.1 bits (244), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 38/145 (26%), Positives = 57/145 (39%), Gaps = 19/145 (13%)

Query: 8   MSCALEEAQN-AALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M   LE A+  A   +  P VG+V V + +++    +          HAE+ AI     +
Sbjct: 1   MVRCLELARQGAGAVSPNPMVGSVIVCDGEVVGEGYH--EAFGGP--HAEVNAI---ASV 53

Query: 66  LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
               +L    LYV LEPC        CA  I    IRR+  G  +P       G      
Sbjct: 54  GDGAVLRRSTLYVNLEPCSHHGKTPPCADLIIEKGIRRVVIGCGDPNPQVAGRGVAKLRS 113

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDF 144
           A      E+  G+ E  S+++ + F
Sbjct: 114 AG----VEVLEGVLEAESKRLNEAF 134


>gi|85712650|ref|ZP_01043696.1| Riboflavin-specific deaminase/reductase [Idiomarina baltica OS145]
 gi|85693500|gb|EAQ31452.1| Riboflavin-specific deaminase/reductase [Idiomarina baltica OS145]
          Length = 373

 Score = 98.1 bits (244), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 36/151 (23%), Positives = 54/151 (35%), Gaps = 21/151 (13%)

Query: 2   KKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
           K  +++M  ALE A+         P VG V V +  I+    ++         HAE+ A+
Sbjct: 8   KHDHLYMHRALELARKGRFTTGPNPAVGCVIVKDASIVGEGWHQKAGE----PHAEVFAL 63

Query: 60  RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113
           R                YVTLEPC        C  A+  A + R+     +P       G
Sbjct: 64  RQAGTQA-----KHATAYVTLEPCSHQGRTPPCVDALINAEVARVVIAMQDPNPVVSGRG 118

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
                 A      E+  G+ E  +R +   F
Sbjct: 119 IHKLHDAD----IEVRVGLFETAARALNPGF 145


>gi|251777591|ref|ZP_04820511.1| riboflavin biosynthesis protein RibD [Clostridium botulinum E1 str.
           'BoNT E Beluga']
 gi|243081906|gb|EES47796.1| riboflavin biosynthesis protein RibD [Clostridium botulinum E1 str.
           'BoNT E Beluga']
          Length = 363

 Score = 98.1 bits (244), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 37/153 (24%), Positives = 62/153 (40%), Gaps = 25/153 (16%)

Query: 4   GNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
              +M  ALE A+      ++   P VGA+ V +N+II    +         +HAE+ AI
Sbjct: 2   NEKYMELALELAKKG--EGKVNPNPLVGALIVKDNEIIGAGYHEKYGE----SHAEVNAI 55

Query: 60  RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113
                    + L    +YVTLEPC        C   I   +I+++  G  +P        
Sbjct: 56  NNA-----TKSLDGSTIYVTLEPCSHYGKTPPCVDLIIEKKIKKVIIGMLDPNPMVSGKS 110

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
            +           E+  G+ E++ ++I + F K
Sbjct: 111 IKKLKDND----IEVIVGVEEEKCKKINESFIK 139


>gi|90415720|ref|ZP_01223654.1| riboflavin biosynthesis protein [marine gamma proteobacterium
           HTCC2207]
 gi|90333043|gb|EAS48213.1| riboflavin biosynthesis protein [marine gamma proteobacterium
           HTCC2207]
          Length = 373

 Score = 98.1 bits (244), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 36/154 (23%), Positives = 54/154 (35%), Gaps = 22/154 (14%)

Query: 3   KGNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
               +MS ALE A            VG V V++  I+     R         HAE+ A+ 
Sbjct: 6   DDREYMSRALELAAKGRFTTSPNPSVGCVLVVDGAIVGEGHTRPAGGN----HAEVEALN 61

Query: 61  MGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGT 114
                           YVTLEPC+       C   +  A I R+     +P       G 
Sbjct: 62  AAASAKGATA------YVTLEPCSHSGKTGPCVEVLIDAGISRVVIACEDPNPKVAGEGI 115

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKER 148
           +    A      E+  G+ E ++R++ + F K  
Sbjct: 116 KLLQDAG----IEVACGLYEDQARELNKGFIKRH 145


>gi|225350924|ref|ZP_03741947.1| hypothetical protein BIFPSEUDO_02499 [Bifidobacterium
           pseudocatenulatum DSM 20438]
 gi|225158380|gb|EEG71622.1| hypothetical protein BIFPSEUDO_02499 [Bifidobacterium
           pseudocatenulatum DSM 20438]
          Length = 191

 Score = 98.1 bits (244), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 34/153 (22%), Positives = 53/153 (34%), Gaps = 18/153 (11%)

Query: 1   MKKGNVFMSCALEEAQN-AALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           M +   +M+ ALE A   A   N  P VG V V + +I++   +          HAE +A
Sbjct: 36  MPQYRKYMTQALELAHKGAGWVNPNPLVGTVVVRDGEILAAGYHDRYRG----PHAERMA 91

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
                   +   +    +  TLEPC        C   I    I R+  G+ +P       
Sbjct: 92  FDYADEHGA--DMHGATVIDTLEPCCHVGSQPACTDLILSHGITRVVVGSIDPNPIVAGK 149

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
           G +           E+   +       I + FF
Sbjct: 150 GLRILEENG----VEVVYDVMRAECDAINRHFF 178


>gi|223994185|ref|XP_002286776.1| hypothetical protein THAPSDRAFT_260925 [Thalassiosira pseudonana
           CCMP1335]
 gi|220978091|gb|EED96417.1| hypothetical protein THAPSDRAFT_260925 [Thalassiosira pseudonana
           CCMP1335]
          Length = 183

 Score = 98.1 bits (244), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 31/159 (19%), Positives = 56/159 (35%), Gaps = 16/159 (10%)

Query: 2   KKGNVFMSCALEEAQNAALRN-EIPVGAVAV--LNNK----IISRAGNRNRELKDVTAHA 54
                 MS A+  +          P GA       +K    + S   NR   L + T H 
Sbjct: 21  TTDEEMMSLAVHLSDRNITEGTGGPFGAAIFERHPDKGYCTLTSIGMNRVVPLGNSTLHG 80

Query: 55  EILAIRMGCRILSQEIL-----PEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109
           E +AI++  R +    L        +L+ + EPC MC  A   + + R+  GA+      
Sbjct: 81  ETVAIQLAQRKVGSFTLMLDGKRRFELFTSCEPCCMCLGATLWSGVSRIVCGATKDDAQA 140

Query: 110 IENGTQFYTLATCHH----SPEIYPGISEQRSRQIIQDF 144
           I          +  H      E+   +  + + +++  +
Sbjct: 141 IGFDEGPVFEESYKHLEKAGVEVTRNVLREEAAKVLTRY 179


>gi|153836433|ref|ZP_01989100.1| diaminohydroxyphosphoribosylamino-pyrimidine deaminase [Vibrio
           parahaemolyticus AQ3810]
 gi|260901767|ref|ZP_05910162.1| riboflavin biosynthesis protein RibD [Vibrio parahaemolyticus
           AQ4037]
 gi|149750335|gb|EDM61080.1| diaminohydroxyphosphoribosylamino-pyrimidine deaminase [Vibrio
           parahaemolyticus AQ3810]
 gi|308108841|gb|EFO46381.1| riboflavin biosynthesis protein RibD [Vibrio parahaemolyticus
           AQ4037]
          Length = 141

 Score = 98.1 bits (244), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 37/144 (25%), Positives = 57/144 (39%), Gaps = 21/144 (14%)

Query: 7   FMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           FM  ALE ++NA    +   PVG V V +N+I+S    +         HAE+ A+     
Sbjct: 5   FMRRALEVSKNALPECQPNPPVGCVLVKDNQIVSEGHTQAIGGN----HAEVEALNA--- 57

Query: 65  ILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
              Q  L  V  YVTLEPC        CA  +  + I ++     +P       G +   
Sbjct: 58  --YQGSLESVTAYVTLEPCSFVGRTPACAVTLVKSGIGKVVVAMLDPDPRNSGRGIEILK 115

Query: 119 LATCHHSPEIYPGISEQRSRQIIQ 142
            A      E+  G+  +   + + 
Sbjct: 116 QAG----IEVEIGLCGKEVSEFLT 135


>gi|118595047|ref|ZP_01552394.1| Riboflavin biosynthesis protein RibD:Riboflavin-specific deaminase,
           C-terminal [Methylophilales bacterium HTCC2181]
 gi|118440825|gb|EAV47452.1| Riboflavin biosynthesis protein RibD:Riboflavin-specific deaminase,
           C-terminal [Methylophilales bacterium HTCC2181]
          Length = 363

 Score = 98.1 bits (244), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 34/152 (22%), Positives = 59/152 (38%), Gaps = 21/152 (13%)

Query: 4   GNVFMSCALEEAQNAALRNEI-PV-GAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
              FM+ A+  A+    + +  PV GA+AV ++ +I    +     KD   HAE+LA++ 
Sbjct: 6   HTEFMALAISLAKQGLGKTQPNPVVGAIAVKDSVVIGSGFHAK-AGKD---HAEVLALKE 61

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
                         LY+TLEPC        C   I  + + ++   +S+P       G  
Sbjct: 62  AGAGA-----KGSTLYITLEPCGHVGKTPPCVDLILSSGVTKVVVASSDPNPLVNGKGLA 116

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
                   H  E+   +   ++  +   FF  
Sbjct: 117 VLRS----HGIEVVEDVLRLQAEALNTGFFSR 144


>gi|224456420|ref|ZP_03664893.1| zinc-binding domain-containing protein [Francisella tularensis
          subsp. tularensis MA00-2987]
 gi|254874186|ref|ZP_05246896.1| zinc-binding domain-containing protein [Francisella tularensis
          subsp. tularensis MA00-2987]
 gi|254840185|gb|EET18621.1| zinc-binding domain-containing protein [Francisella tularensis
          subsp. tularensis MA00-2987]
          Length = 72

 Score = 98.1 bits (244), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 25/67 (37%), Positives = 36/67 (53%)

Query: 2  KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           +   FM  A ++A  A    E+P+GAV V +++II +  N+   L D TAHAEIL +R 
Sbjct: 6  DQDIFFMQKAYQQALLAYQAGEVPIGAVLVRDDQIIVQNFNQTIGLNDPTAHAEILVLRS 65

Query: 62 GCRILSQ 68
              L  
Sbjct: 66 AALKLGN 72


>gi|89093485|ref|ZP_01166433.1| riboflavin biosynthesis protein RibD [Oceanospirillum sp. MED92]
 gi|89082175|gb|EAR61399.1| riboflavin biosynthesis protein RibD [Oceanospirillum sp. MED92]
          Length = 379

 Score = 98.1 bits (244), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 34/152 (22%), Positives = 52/152 (34%), Gaps = 21/152 (13%)

Query: 4   GNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
            + +M+ A+  A+      N  P VG V V +  I+    +          HAE+ A+  
Sbjct: 9   DHRYMARAIVLAKQGLYTTNPNPRVGCVLVKDEVIVGEGFHFRAGEG----HAEVNAMAQ 64

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
              +           YVTLEPC        CA  +  A + R+     +P       G Q
Sbjct: 65  AGDLA-----KGATAYVTLEPCSHYGRTPPCAEGLIKAGVNRVVCAMVDPNPQVAGRGIQ 119

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
               A          G+ E  +R +   F K 
Sbjct: 120 MLESAG----ISAESGLLEAEARALNPGFIKR 147


>gi|239816932|ref|YP_002945842.1| CMP/dCMP deaminase zinc-binding [Variovorax paradoxus S110]
 gi|239803509|gb|ACS20576.1| CMP/dCMP deaminase zinc-binding [Variovorax paradoxus S110]
          Length = 158

 Score = 97.7 bits (243), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 38/163 (23%), Positives = 57/163 (34%), Gaps = 20/163 (12%)

Query: 1   MKKGNVF--MSCALEEAQNAALRNEIPVGAVAVLNNK--IISRAGNRNRELKDVTAHAEI 56
           M +  +   +  A E A+ A      P GAV V  +   I++  GN      D   HAE 
Sbjct: 1   MTRDQIIRALRRADEVARRAMAMGRHPFGAVLVAPDGETILAEQGN-----IDTVNHAEA 55

Query: 57  LAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIE----- 111
              R   +    + L +  L  T EPC MCA     A I R+ YGA       +      
Sbjct: 56  TLARHAAQNWPADYLWQCTLVTTFEPCAMCAGTSYWAHIGRIVYGAEESALLALTGDHPE 115

Query: 112 ----NGTQFYTLATCHHSPEIYPGISE--QRSRQIIQDFFKER 148
               +       A      E+   + E  +      + F++ R
Sbjct: 116 NPTLSLPCREVFARGQKKIEVIGPVPEVAEEMIATHRGFWEAR 158


>gi|296160058|ref|ZP_06842878.1| riboflavin biosynthesis protein RibD [Burkholderia sp. Ch1-1]
 gi|295889804|gb|EFG69602.1| riboflavin biosynthesis protein RibD [Burkholderia sp. Ch1-1]
          Length = 391

 Score = 97.7 bits (243), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 34/151 (22%), Positives = 52/151 (34%), Gaps = 18/151 (11%)

Query: 2   KKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
           +   V M  AL  A+      +  P VG V V N ++I     +         HAEI A+
Sbjct: 4   QTDFVHMERALALARRGMYTTDPNPRVGCVLVKNGEVIGEGFTQPAGQD----HAEIRAL 59

Query: 60  RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113
           +          L     YVTLEPC        C  A+  A++  +     +P       G
Sbjct: 60  KDA--RSRGHDLRGATAYVTLEPCSHFGRTPPCVNALIEAQVALVVAAMEDPNPLVSGRG 117

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
                 A      E+  G+    + ++   F
Sbjct: 118 LAILRDAG----IEVRCGLLANEAHELNIGF 144


>gi|134098685|ref|YP_001104346.1| cytosine deaminase [Saccharopolyspora erythraea NRRL 2338]
 gi|291003628|ref|ZP_06561601.1| cytosine deaminase [Saccharopolyspora erythraea NRRL 2338]
 gi|133911308|emb|CAM01421.1| cytosine deaminase [Saccharopolyspora erythraea NRRL 2338]
          Length = 156

 Score = 97.7 bits (243), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 29/126 (23%), Positives = 49/126 (38%), Gaps = 15/126 (11%)

Query: 24  IPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEP 82
           IP+GA  V  + +++ R  NR  +  D + H E  A R   R  S        +  TL P
Sbjct: 30  IPIGAALVGRDGEVLGRGHNRRVQDGDPSVHGETSAFRAAGRQRS---YAGTTMVTTLSP 86

Query: 83  CTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQR-SRQII 141
           C  C+  +    I R+  G +    GG +   +        H  E+   + +     +++
Sbjct: 87  CWYCSGLVRQFGISRVVIGEARNFHGGHDWLAE--------HGVEVV--LLDDPGCVEMM 136

Query: 142 QDFFKE 147
            DF   
Sbjct: 137 ADFIAA 142


>gi|162147221|ref|YP_001601682.1| cytidine deaminase [Gluconacetobacter diazotrophicus PAl 5]
 gi|209544272|ref|YP_002276501.1| CMP/dCMP deaminase [Gluconacetobacter diazotrophicus PAl 5]
 gi|161785798|emb|CAP55369.1| putative cytidine deaminase [Gluconacetobacter diazotrophicus PAl
           5]
 gi|209531949|gb|ACI51886.1| CMP/dCMP deaminase zinc-binding [Gluconacetobacter diazotrophicus
           PAl 5]
          Length = 168

 Score = 97.7 bits (243), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 35/147 (23%), Positives = 57/147 (38%), Gaps = 11/147 (7%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRE-LKDVTAHAEILAIR 60
                +  A+  + +A  +   P  A+      +++S A N +     D T HAE+ A+ 
Sbjct: 8   TDLDLLRRAIALSADARAQGRHPFAALVADAQGRVVSTAINNSMPPEGDPTQHAELRAVA 67

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPK----GGGIENGTQF 116
              RIL  + + +  LY + EPC MCA A+    IRR+ Y  S  +     G       F
Sbjct: 68  GAARILPPDAMADCTLYTSAEPCCMCAGAVYWTNIRRVVYALSEHRLLALTGAHPENPTF 127

Query: 117 Y-----TLATCHHSPEIYPGISEQRSR 138
                   A   H   +   + E  + 
Sbjct: 128 ALPCREVFARGQHPVAVLGPMLEDEAA 154


>gi|194705936|gb|ACF87052.1| unknown [Zea mays]
          Length = 138

 Score = 97.7 bits (243), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 32/116 (27%), Positives = 50/116 (43%), Gaps = 21/116 (18%)

Query: 53  HAEILAIRMGCRILSQ---------EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
           HAE+ AI +  R             E     DLYVT EPC MCA A+S+  IR +Y+G +
Sbjct: 6   HAEMEAIDVLLREWQSMGLDQPQVAEKFAGCDLYVTCEPCIMCATALSIIGIREVYFGCA 65

Query: 104 NPKGGGIENGTQFYT------------LATCHHSPEIYPGISEQRSRQIIQDFFKE 147
           N K GG  +    +              A+     +   GI  + +  + + F+++
Sbjct: 66  NDKFGGCGSIMSLHNGAASSSDELSGSQASTPKGFKCTGGIMAEEAVALFRCFYEQ 121


>gi|23098113|ref|NP_691579.1| hypothetical protein OB0658 [Oceanobacillus iheyensis HTE831]
 gi|22776338|dbj|BAC12614.1| hypothetical conserved protein [Oceanobacillus iheyensis HTE831]
          Length = 158

 Score = 97.7 bits (243), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 31/156 (19%), Positives = 61/156 (39%), Gaps = 11/156 (7%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIR 60
                ++   +E A+ A    + P G+V V  N  +++   N      D T H E    +
Sbjct: 4   DSDLKYLRRCIELAKAALETGDEPFGSVLVSANGDVLAEDYNHV-SGGDHTQHPEFALAK 62

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKG-------GGIENG 113
                ++ E   +  +Y + E C MCAAA     + R+ Y +S+ +        G  E+ 
Sbjct: 63  WAAGNMTSEERGKATVYTSGEHCPMCAAAHGWVGLGRIVYASSSEQLVQWLNEIGVTESR 122

Query: 114 TQFYTLATCHHSPEIYPGI--SEQRSRQIIQDFFKE 147
            +   +        I   +    ++ RQ+ + F+ +
Sbjct: 123 VRNLPIQDVIRDTTIEGPVPALAEQVRQLHRQFYAK 158


>gi|298249165|ref|ZP_06972969.1| riboflavin biosynthesis protein RibD [Ktedonobacter racemifer DSM
           44963]
 gi|297547169|gb|EFH81036.1| riboflavin biosynthesis protein RibD [Ktedonobacter racemifer DSM
           44963]
          Length = 383

 Score = 97.7 bits (243), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 44/155 (28%), Positives = 59/155 (38%), Gaps = 30/155 (19%)

Query: 3   KGNVFMSCALEEAQ--NAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTA-----HAE 55
               FM  A+  A+          PVGAV V  N++I R           T+     HAE
Sbjct: 2   SHLEFMQKAIACARSIEGRTSPRPPVGAVLVRENQVIGRG---------ATSPPYGPHAE 52

Query: 56  ILAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGG 109
           I A+R              DLY TLEPC        C AAI  A I+R+  G+ +P    
Sbjct: 53  IHALREA----ETTAAVGADLYTTLEPCCITVHTPPCTAAIIAAGIKRVIIGSLDPNPQV 108

Query: 110 IENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
              G      A      E+   I+E  +  +I+ F
Sbjct: 109 SGRGVAQLREAG----IEVITTIAEPETAALIRPF 139


>gi|114777284|ref|ZP_01452295.1| cytidine and deoxycytidylate deaminase family protein
           [Mariprofundus ferrooxydans PV-1]
 gi|114552429|gb|EAU54912.1| cytidine and deoxycytidylate deaminase family protein
           [Mariprofundus ferrooxydans PV-1]
          Length = 195

 Score = 97.7 bits (243), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 34/151 (22%), Positives = 54/151 (35%), Gaps = 17/151 (11%)

Query: 8   MSCALEEAQNAALRN-EIPVGAVAVLNNK--IISRAGNRNRELKDVTAHAEILAIRMGCR 64
           M  A+  ++         P GA     +   +IS   N         AHAE++AI    +
Sbjct: 33  MQLAITLSRMNIESGTGGPFGAAVFDMDTHALISVGMNLVVSAHCSMAHAEMVAISSAQQ 92

Query: 65  ILSQEIL----PEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIE-------NG 113
            L    L       +L  + EPC MC  AI  + IR+L  GAS+     +          
Sbjct: 93  KLGSFDLGSGTARYELVTSCEPCAMCFGAIPWSGIRQLVCGASDADARAVGFDEGPKMTD 152

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
            +    A       +   +  Q +  I+Q +
Sbjct: 153 WKAALEAR---GISVRTDLCRQEAAAILQRY 180


>gi|237809037|ref|YP_002893477.1| CMP/dCMP deaminase zinc-binding [Tolumonas auensis DSM 9187]
 gi|237501298|gb|ACQ93891.1| CMP/dCMP deaminase zinc-binding [Tolumonas auensis DSM 9187]
          Length = 203

 Score = 97.7 bits (243), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 32/117 (27%), Positives = 53/117 (45%), Gaps = 7/117 (5%)

Query: 3   KGNVFMSCALEEAQNAALRN-EIPVGAVAVL--NNKIISRAGNRNRELKDVTAHAEILAI 59
                M+ A+E A+   LR    P  ++ V   +  ++S   N+     + T H E++AI
Sbjct: 37  SDEEKMTLAIELARQNVLRGTGGPFASIIVHRQSGVLLSVGVNQVVAQNNSTLHGEVMAI 96

Query: 60  RMGCRILSQEILP----EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN 112
            +G + L Q  L     E +L+ + EPC MC  AI  + ++RL   A+      I  
Sbjct: 97  MLGEQRLQQFSLNSQSGEYELFTSCEPCAMCMGAILWSGVKRLVCAATGEDARAIGF 153


>gi|194364355|ref|YP_002026965.1| riboflavin biosynthesis protein RibD [Stenotrophomonas maltophilia
           R551-3]
 gi|194347159|gb|ACF50282.1| riboflavin biosynthesis protein RibD [Stenotrophomonas maltophilia
           R551-3]
          Length = 361

 Score = 97.7 bits (243), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 33/149 (22%), Positives = 57/149 (38%), Gaps = 21/149 (14%)

Query: 4   GNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
            ++ M+ AL  A+ AA   R    VG V     +++ +  ++         HAE+ A+R 
Sbjct: 9   DHLHMANALRLAERAAYTTRPNPMVGCVIAHGERVVGQGWHQRAGG----PHAEVFALRE 64

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
                          YVTLEPC        CA A+  A + R+     +P       G  
Sbjct: 65  AG-----SEARGATAYVTLEPCAHYGRTPPCALALIEAGVSRVVAAMRDPFPKVDGGGFD 119

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDF 144
                  +   E+  G+   ++R++ + F
Sbjct: 120 LLR----NAGIEVAEGLMAAQARELNKGF 144


>gi|299822452|ref|ZP_07054338.1| riboflavin biosynthesis protein RibD [Listeria grayi DSM 20601]
 gi|299815981|gb|EFI83219.1| riboflavin biosynthesis protein RibD [Listeria grayi DSM 20601]
          Length = 394

 Score = 97.7 bits (243), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 36/161 (22%), Positives = 62/161 (38%), Gaps = 25/161 (15%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56
           + K   +M+ A++EA+    R +    P VGAV V  +++I +  + +        HAE+
Sbjct: 23  LDKHEKWMAIAIKEARKG--RGKTYKNPLVGAVIVKADRLIGKGYHASYGD----VHAEV 76

Query: 57  LAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGI 110
            A +        +      +YVTLEPC        C   I    I  +Y    +      
Sbjct: 77  NAFQNVSNPEETKH---SSIYVTLEPCAHHGKQPPCCEKIVEMGIEHVYVAQLDSNPLVR 133

Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQD--FFKERR 149
             G  +       H  ++  G+ E+ + Q+     FF   R
Sbjct: 134 GKGVAYLEA----HGIKVTIGVLEKEAEQLNPAFHFFHRHR 170


>gi|300704870|ref|YP_003746473.1| bifunctional protein: diaminohydroxyphosphoribosylaminopyrimidine
           deaminase (N-terminal);
           5-amino-6-(5-phosphoribosylamino) uracil reductase
           [Ralstonia solanacearum CFBP2957]
 gi|299072534|emb|CBJ43884.1| bifunctional protein: diaminohydroxyphosphoribosylaminopyrimidine
           deaminase (N-terminal);
           5-amino-6-(5-phosphoribosylamino) uracil reductase
           [Ralstonia solanacearum CFBP2957]
          Length = 370

 Score = 97.7 bits (243), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 39/150 (26%), Positives = 55/150 (36%), Gaps = 20/150 (13%)

Query: 4   GNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
            +V M  AL  A+N       P   VG V V ++ II     +         HAEI AI+
Sbjct: 6   DHVMMQRALALAENGLFTT-TPNPRVGCVLVRDDTIIGEGFTQPPGQD----HAEIQAIK 60

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
                           YVTLEPC        CA  +  A I R+     +P       G 
Sbjct: 61  DAQARGHDVR--GATAYVTLEPCSHFGRTPPCADRLVEAGIARVVAAMEDPNPAVSGRGL 118

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
           Q    A      ++  G+ E+ +R++   F
Sbjct: 119 QKLREAG----IDVRCGLLEREARELNIGF 144


>gi|37520819|ref|NP_924196.1| riboflavin biosynthesis protein [Gloeobacter violaceus PCC 7421]
 gi|35211814|dbj|BAC89191.1| riboflavin biosynthesis protein [Gloeobacter violaceus PCC 7421]
          Length = 366

 Score = 97.7 bits (243), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 37/151 (24%), Positives = 54/151 (35%), Gaps = 23/151 (15%)

Query: 3   KGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
               +M   L  A+ A  R   P   VGAV V +   +    +     K    HAE  A+
Sbjct: 5   SDEDWMERCLALAEQAWGRT-TPNPLVGAVVVNDGLAVGEGFH----PKAGAPHAEAFAL 59

Query: 60  RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113
           R    +          LYV LEPC        C  AI  A ++R+  G  +P       G
Sbjct: 60  RAAGDLA-----RGATLYVNLEPCNHHGRTPPCTEAIVAAGLQRVVIGMVDPNPIVSGRG 114

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
            +    A      E+  G+   R  ++ + F
Sbjct: 115 LERLRTAG----IEVSVGVLSDRCERLNEAF 141


>gi|683699|emb|CAA88261.1| orf2 [Saccharomyces cerevisiae]
          Length = 213

 Score = 97.7 bits (243), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 28/119 (23%), Positives = 51/119 (42%), Gaps = 11/119 (9%)

Query: 38  SRAGNRNRELKDVTAHAEILAIRMGCRILSQ----EILPEVDLYVTLEPCTMCAAAISLA 93
           +   N   +     AHAE + I     +L      ++  ++ LYVT+EPC MCA+A+   
Sbjct: 2   AYGMNDTNKSLTGVAHAEFMGIDQIKAMLGSRGVVDVFKDITLYVTVEPCIMCASALKQL 61

Query: 94  RIRRLYYGASNPKGGGIENGTQFYTL-----ATCHHS--PEIYPGISEQRSRQIIQDFF 145
            I ++ +G  N + GG                  + +   E  PGI  + +  +++ F+
Sbjct: 62  DIGKVVFGCGNERFGGNGTVLSVNHDTCTLVPKNNSAAGYESIPGILRKEAIMLLRYFY 120


>gi|72382670|ref|YP_292025.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Prochlorococcus marinus str. NATL2A]
 gi|72002520|gb|AAZ58322.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Prochlorococcus marinus str. NATL2A]
          Length = 364

 Score = 97.7 bits (243), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 34/152 (22%), Positives = 61/152 (40%), Gaps = 23/152 (15%)

Query: 7   FMSCALEEAQNAALRNEI-P-VGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
           +M  +++ A  A  R    P VG++ +  N +++    +      +   HAEI A+    
Sbjct: 14  WMRRSIQLALLAEGRTSPNPLVGSIVLDSNGRLVGEGFHS--GAGNP--HAEIEALAQAG 69

Query: 64  RILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFY 117
           +        +  + VTLEPC        C  AI  A ++++  G  +P      NG    
Sbjct: 70  KKA-----LDGTIVVTLEPCCHQGLTPPCTEAIIRAGLKKVVVGMVDPDPRVSGNGISRL 124

Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDF-FKER 148
             +      E+  G+  Q    I ++F F+ R
Sbjct: 125 KDSGL----EVIEGVLSQECESINREFSFRVR 152


>gi|308048548|ref|YP_003912114.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase
           ;5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Ferrimonas balearica DSM 9799]
 gi|307630738|gb|ADN75040.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase
           ;5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Ferrimonas balearica DSM 9799]
          Length = 373

 Score = 97.7 bits (243), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 35/156 (22%), Positives = 52/156 (33%), Gaps = 21/156 (13%)

Query: 2   KKGNVFMSCALEEAQNAAL--RNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
                 M+ ALE A+   L  R    VG V V + +++    +          HAE+ A+
Sbjct: 4   TDDARHMARALELARRGQLTTRPNPRVGCVLVRDGEVVGEGFHIRAGG----PHAEVHAL 59

Query: 60  RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113
           R                YVTLEPC        C+ A+  A + R+     +P       G
Sbjct: 60  RAAGDKA-----RGATAYVTLEPCSHYGRTPPCSQALIDAGVARVVAAMVDPNPQVAGRG 114

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
                 A      E   G+    +  +   F K  R
Sbjct: 115 LAMLEAAG----IETQHGLMANEAEAVNPGFMKRMR 146


>gi|83746190|ref|ZP_00943244.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase /
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Ralstonia solanacearum UW551]
 gi|207744096|ref|YP_002260488.1| riboflavin biosynthesis bifunctional protein ribd :
           diaminohydroxyphosphoribosylaminopyrimidine deaminase +
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Ralstonia solanacearum IPO1609]
 gi|83727156|gb|EAP74280.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase /
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Ralstonia solanacearum UW551]
 gi|206595500|emb|CAQ62427.1| riboflavin biosynthesis bifunctional protein ribd :
           diaminohydroxyphosphoribosylaminopyrimidine deaminase +
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Ralstonia solanacearum IPO1609]
          Length = 370

 Score = 97.7 bits (243), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 38/150 (25%), Positives = 54/150 (36%), Gaps = 20/150 (13%)

Query: 4   GNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
            +  M  AL  A+N       P   VG V V ++ II     +         HAEI AI+
Sbjct: 6   DHAMMQRALALAENGLFTT-TPNPRVGCVLVRDDTIIGEGFTQPPGQD----HAEIQAIK 60

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
                           YVTLEPC        CA  +  A I R+     +P       G 
Sbjct: 61  DAQARGHDVR--GATAYVTLEPCSHFGRTPPCADRLVEAGIARVVAAMEDPNPAVSGRGL 118

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
           Q    A      ++  G+ E+ +R++   F
Sbjct: 119 QKLREAG----IDVRCGLLEREARELNIGF 144


>gi|229843994|ref|ZP_04464135.1| hypothetical protein CGSHi6P18H1_06131 [Haemophilus influenzae
           6P18H1]
 gi|229812988|gb|EEP48676.1| hypothetical protein CGSHi6P18H1_06131 [Haemophilus influenzae
           6P18H1]
          Length = 372

 Score = 97.7 bits (243), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 35/156 (22%), Positives = 56/156 (35%), Gaps = 21/156 (13%)

Query: 2   KKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
            +  VFM  AL+ A          P VG V V N +I+    +   +      HAE +A+
Sbjct: 6   SQDCVFMQRALDLAAKGQYTTTPNPSVGCVLVKNGEIVGEGFH--FKAGQP--HAERVAL 61

Query: 60  RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113
                    E       YVTLEPC        CA  +  A + ++     +P       G
Sbjct: 62  AQAG-----ENAKGAIAYVTLEPCSHYGRTPPCALGLIEAGVVKVIAAMQDPNPQVAGKG 116

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +  + A    +      +   ++ +I + F K  R
Sbjct: 117 LKMLSDAGIESAVN----LLNDQAEKINKGFLKRMR 148


>gi|207728168|ref|YP_002256562.1| riboflavin biosynthesis bifunctional protein ribd :
           diaminohydroxyphosphoribosylaminopyrimidine deaminase +
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Ralstonia solanacearum MolK2]
 gi|206591413|emb|CAQ57025.1| riboflavin biosynthesis bifunctional protein ribd :
           diaminohydroxyphosphoribosylaminopyrimidine deaminase +
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Ralstonia solanacearum MolK2]
          Length = 370

 Score = 97.7 bits (243), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 38/150 (25%), Positives = 54/150 (36%), Gaps = 20/150 (13%)

Query: 4   GNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
            +  M  AL  A+N       P   VG V V ++ II     +         HAEI AI+
Sbjct: 6   DHAMMQRALALAENGLFTT-TPNPRVGCVLVRDDTIIGEGFTQPPGQD----HAEIQAIK 60

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
                           YVTLEPC        CA  +  A I R+     +P       G 
Sbjct: 61  DAQARGHDVR--GATAYVTLEPCSHFGRTPPCADRLVEAGIARVVAAMEDPNPAVSGRGL 118

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
           Q    A      ++  G+ E+ +R++   F
Sbjct: 119 QKLREAG----IDVRCGLLEREARELNIGF 144


>gi|194016547|ref|ZP_03055161.1| riboflavin biosynthesis protein RibD [Bacillus pumilus ATCC 7061]
 gi|194012020|gb|EDW21588.1| riboflavin biosynthesis protein RibD [Bacillus pumilus ATCC 7061]
          Length = 356

 Score = 97.7 bits (243), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 39/147 (26%), Positives = 62/147 (42%), Gaps = 25/147 (17%)

Query: 8   MSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
           M+ +LE A+  A++ +    P VGAV V +N+I+    +          HAEI A++M  
Sbjct: 1   MNLSLENAR--AMKGQTSPNPLVGAVIVRDNEIVGVGAHMKAGE----PHAEIHALKMAG 54

Query: 64  RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFY 117
                       +YVTLEPC+       CA A+  A +  +   A +P       G    
Sbjct: 55  DKA-----KGATIYVTLEPCSHHGRTGPCAEALVKAGVETVVVAALDPNPLVAGRGIAIL 109

Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDF 144
             A      ++  G+ EQ S  + + F
Sbjct: 110 QDAG----IQVITGVLEQESILMNEVF 132


>gi|124026389|ref|YP_001015504.1| putative diaminohydroxyphosphoribosylaminopyrimidine deaminase and
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Prochlorococcus marinus str. NATL1A]
 gi|123961457|gb|ABM76240.1| putative Diaminohydroxyphosphoribosylaminopyrimidine deaminase and
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Prochlorococcus marinus str. NATL1A]
          Length = 350

 Score = 97.7 bits (243), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 36/151 (23%), Positives = 60/151 (39%), Gaps = 23/151 (15%)

Query: 8   MSCALEEAQNAALRNEI-P-VGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           M  +++ A  A  R    P VG+V +  N +++    +      +   HAEI A+    +
Sbjct: 1   MRRSIQLALLAEGRTSPNPLVGSVVLDSNGRLVGEGFHT--GAGNP--HAEIEALAQAGK 56

Query: 65  ILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
                 L    + VTLEPC        C  AI  A ++++  G  +P      NG     
Sbjct: 57  K----SLDG-TIVVTLEPCCHQGLTPPCTEAIIKAGLKKVVVGMVDPDPRVSGNGISRLK 111

Query: 119 LATCHHSPEIYPGISEQRSRQIIQDF-FKER 148
            +      E+  G+  Q    I ++F F+ R
Sbjct: 112 DSGL----EVIEGVLSQECESINREFSFRVR 138


>gi|296166141|ref|ZP_06848586.1| cytosine deaminase [Mycobacterium parascrofulaceum ATCC BAA-614]
 gi|295898550|gb|EFG78111.1| cytosine deaminase [Mycobacterium parascrofulaceum ATCC BAA-614]
          Length = 150

 Score = 97.7 bits (243), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 35/142 (24%), Positives = 54/142 (38%), Gaps = 13/142 (9%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  AL+EA+       IP+GA     +  ++ R  NR  +  D + HAE+ A R   R  
Sbjct: 9   MDVALDEARAGLAEGGIPIGAALFTADGVLLGRGRNRRVQRGDPSLHAEVDAFRAAGR-- 66

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
            Q       +  TL PC  C+  +    I  L  G S    GG      +        S 
Sbjct: 67  -QRDYRSTVMVTTLAPCWYCSGLVRQFNIGSLLVGESRTFTGG----HDWLAANGI--SV 119

Query: 127 EIYPGISEQRSRQIIQDFFKER 148
            +   + ++R   ++  F  E 
Sbjct: 120 TV---LDDERCATMMAAFIAEH 138


>gi|91202314|emb|CAJ75374.1| strongly similar to riboflavin biosynthesis protein RibD
           [Candidatus Kuenenia stuttgartiensis]
          Length = 367

 Score = 97.3 bits (242), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 49/157 (31%), Positives = 71/157 (45%), Gaps = 26/157 (16%)

Query: 1   MKK-GNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAE 55
           MK+    +M+ ALE A+    R  +   P VGAV V NN+I+ +  ++N       AHAE
Sbjct: 4   MKEHDEEYMTLALELAEKG--RGMVEPNPMVGAVIVKNNEIVGKGYHKNYGG----AHAE 57

Query: 56  ILAIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGG 109
           I AI  G             LYVT+EPC        CAAAI LA I ++     +P    
Sbjct: 58  IHAINEGGVNC-----KGATLYVTMEPCAHYGKTAPCAAAIILAGIAKVVTTCVDPNPVT 112

Query: 110 IENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
              G +    A       +  G+ E +++++   FFK
Sbjct: 113 SGKGVKQLQAAG----ITVRMGVMEDQAKKLNAPFFK 145


>gi|300692257|ref|YP_003753252.1| bifunctional protein: diaminohydroxyphosphoribosylaminopyrimidine
           deaminase (N-terminal);
           5-amino-6-(5-phosphoribosylamino) uracil reductase
           [Ralstonia solanacearum PSI07]
 gi|299079317|emb|CBJ51989.1| bifunctional protein: diaminohydroxyphosphoribosylaminopyrimidine
           deaminase (N-terminal);
           5-amino-6-(5-phosphoribosylamino) uracil reductase
           [Ralstonia solanacearum PSI07]
          Length = 370

 Score = 97.3 bits (242), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 37/150 (24%), Positives = 54/150 (36%), Gaps = 20/150 (13%)

Query: 4   GNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
            +  M  AL  A+N       P   VG V V ++ II     +         HAEI AI+
Sbjct: 6   DHAMMQRALALAENGLFTT-TPNPRVGCVLVRDDTIIGEGFTQPAGQD----HAEIQAIK 60

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
                           YVTLEPC        CA  +  A + R+     +P       G 
Sbjct: 61  DAQARGHDVR--GATAYVTLEPCSHFGRTPPCADRLVEAGVARVVAAMEDPNPAVSGRGL 118

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
           Q    A      ++  G+ E+ +R++   F
Sbjct: 119 QKLREAG----IDVRCGLLEREARELNIGF 144


>gi|113954800|ref|YP_730035.1| riboflavin biosynthesis protein RibD [Synechococcus sp. CC9311]
 gi|113882151|gb|ABI47109.1| riboflavin biosynthesis protein RibD [Synechococcus sp. CC9311]
          Length = 365

 Score = 97.3 bits (242), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 34/149 (22%), Positives = 53/149 (35%), Gaps = 26/149 (17%)

Query: 7   FMSCALEEAQNAALRNEI---P-VGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRM 61
           +M  AL+ A  A    +    P VGAV +     ++    +         AHAE+ A+  
Sbjct: 11  WMRRALQLA--ALAEGQTSPNPLVGAVVLDAQGALVGEGFHAKAGQ----AHAEVGALAQ 64

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
                         + VTLEPC        C+ A+  A I+R+     +P       G Q
Sbjct: 65  AG-----GRAKGGTIIVTLEPCCHQGRTPPCSEAVIQAGIQRVVVALKDPDPRVAGGGIQ 119

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDF 144
               A      E+  G+ E  +    + F
Sbjct: 120 RLRDAGL----EVITGVLEAEAAHQNRAF 144


>gi|37521331|ref|NP_924708.1| hypothetical protein gll1762 [Gloeobacter violaceus PCC 7421]
 gi|35212328|dbj|BAC89703.1| gll1762 [Gloeobacter violaceus PCC 7421]
          Length = 182

 Score = 97.3 bits (242), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 39/143 (27%), Positives = 62/143 (43%), Gaps = 14/143 (9%)

Query: 12  LEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS---Q 68
           + EA  A    +  VGA+     K+++   N+  E  DVTAH E+  +R     L     
Sbjct: 27  IAEANAAVDEGKAGVGAMLTWRGKVLALEHNQYAETHDVTAHGEMSILRAQAERLDGMSD 86

Query: 69  EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKG--------GGIENGTQFYTLA 120
           E   ++ +YVTLEPC MC +A+SL  I R+ Y A +           G           A
Sbjct: 87  EDKKDLCMYVTLEPCLMCLSAMSLVGIPRVVYAALSEDANIEQALLEGATARNVN---DA 143

Query: 121 TCHHSPEIYPGISEQRSRQIIQD 143
                 E+ PG+  +   ++++ 
Sbjct: 144 LVRGPLELVPGVRREEGIKLLER 166


>gi|118470530|ref|YP_887878.1| cytidine/deoxycytidylate deaminase, zinc-binding region
           [Mycobacterium smegmatis str. MC2 155]
 gi|118171817|gb|ABK72713.1| cytidine/deoxycytidylate deaminase, zinc-binding region
           [Mycobacterium smegmatis str. MC2 155]
          Length = 159

 Score = 97.3 bits (242), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 29/107 (27%), Positives = 47/107 (43%), Gaps = 2/107 (1%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
              ++   ++ A+ A    + P G+V V      +    NR  +  D TAH E    R  
Sbjct: 7   DLKYLRRCVDLAREALDDGDEPFGSVLVDHTGTTLFEDRNRV-KDGDATAHPEFAIARWA 65

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109
            R L+ +      +Y + E C MCAAA +   + R+ Y  S+ + GG
Sbjct: 66  ARHLTPDRRARATVYTSGEHCPMCAAAHAWVGLGRIVYATSSAQLGG 112


>gi|302900034|ref|XP_003048181.1| hypothetical protein NECHADRAFT_93328 [Nectria haematococca mpVI
           77-13-4]
 gi|256729113|gb|EEU42468.1| hypothetical protein NECHADRAFT_93328 [Nectria haematococca mpVI
           77-13-4]
          Length = 166

 Score = 97.3 bits (242), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 33/149 (22%), Positives = 58/149 (38%), Gaps = 10/149 (6%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIR 60
            K    +  A+  A+ A    + P G+V V  + K++    NR     D T H E    R
Sbjct: 4   DKDIQHLRLAVSLAREALQAGDFPFGSVLVSASGKVLQTDRNRETTGSDSTLHPEFTLAR 63

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY-------GASNPKGGGIENG 113
              + LS     E  +Y + E C MC+AA +   + R+ Y       GA   + G  ++ 
Sbjct: 64  WAEQNLSPTERAESTVYTSGEHCAMCSAAHAWCGLGRIVYASSTEQLGAWRDEYGIGKSP 123

Query: 114 TQFYTLATCHHSPEIYPGI--SEQRSRQI 140
               ++       ++   +   +Q  R +
Sbjct: 124 VSPLSIQQVAPGIQVEGPVEGLDQEVRAL 152


>gi|323497966|ref|ZP_08102975.1| diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           [Vibrio sinaloensis DSM 21326]
 gi|323317011|gb|EGA70013.1| diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           [Vibrio sinaloensis DSM 21326]
          Length = 368

 Score = 97.3 bits (242), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 34/153 (22%), Positives = 56/153 (36%), Gaps = 31/153 (20%)

Query: 8   MSCALEEAQNAALRNEI------P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           MS A++ A+       +      P VG V   N +++    +          HAE+ A+R
Sbjct: 12  MSRAIDLAK-----GGVYTTAPNPNVGCVITRNEEVVGEGFHYRAGE----PHAEVHALR 62

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           M               YVTLEPC        CA  +  A++ ++   + +P       G 
Sbjct: 63  MAGEQS-----VGATAYVTLEPCSHYGRTPPCAEGLIKAKVAKVICASQDPNPQVAGRGI 117

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
           +    A      E+  G+ EQ +  +   F K 
Sbjct: 118 KMLRDAG----IEVEVGLLEQEALALNPGFIKR 146


>gi|319897565|ref|YP_004135762.1| riboflavin biosynthesis protein ribd [Haemophilus influenzae F3031]
 gi|317433071|emb|CBY81445.1| riboflavin biosynthesis protein RibD [Haemophilus influenzae F3031]
          Length = 372

 Score = 97.3 bits (242), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 35/156 (22%), Positives = 56/156 (35%), Gaps = 21/156 (13%)

Query: 2   KKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
            +  VFM  AL+ A          P VG V V N +I+    +   +      HAE +A+
Sbjct: 6   SQDCVFMQRALDLAAKGQYTTTPNPSVGCVLVKNGEIVGEGFH--FKAGQP--HAERVAL 61

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENG 113
                    E       YVTLEPC        CA  +  A + ++     +P       G
Sbjct: 62  AQAG-----ENAKGATAYVTLEPCAHYGRTSPCALGLIEAGVVKVIAAMQDPNPQVAGKG 116

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +  + A    +      +   ++ +I + F K  R
Sbjct: 117 LKMLSDAGIESAVN----LLNDQAEKINKGFLKRMR 148


>gi|118602777|ref|YP_903992.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Candidatus Ruthia magnifica str. Cm (Calyptogena
           magnifica)]
 gi|118567716|gb|ABL02521.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Candidatus
           Ruthia magnifica str. Cm (Calyptogena magnifica)]
          Length = 349

 Score = 97.3 bits (242), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 36/153 (23%), Positives = 58/153 (37%), Gaps = 21/153 (13%)

Query: 2   KKGNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
           K     M  AL+ A      +++   VG V V + KII++  ++        AH EI A+
Sbjct: 7   KNDTQNMVIALKLASQGKYGVKSNPMVGCVIVKHTKIIAKGYHQTFGK----AHGEINAL 62

Query: 60  RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113
           +                YVTLEPC        CA AI  + ++++     +P       G
Sbjct: 63  QQ-----INHQAQGATFYVTLEPCSHQGKTPSCAQAIIHSGVKKVIIAMLDPNPLVNGKG 117

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
                    +   E+  G+ E  +  + Q F K
Sbjct: 118 VVMLE----NAGIEVKIGLLENDALTLNQGFIK 146


>gi|260775295|ref|ZP_05884192.1| diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Vibrio coralliilyticus ATCC BAA-450]
 gi|260608476|gb|EEX34641.1| diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Vibrio coralliilyticus ATCC BAA-450]
          Length = 368

 Score = 97.3 bits (242), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 35/153 (22%), Positives = 55/153 (35%), Gaps = 21/153 (13%)

Query: 3   KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +    MS A+E A+         P VG V  L++ I+    +          HAE+ A+R
Sbjct: 7   QDYQMMSRAIELAKGGIYTTAPNPNVGCVITLDDDIVGEGFHYRAGE----PHAEVHALR 62

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           M               YVTLEPC        CA  +  A++ ++     +P       G 
Sbjct: 63  MAGDKS-----VGATAYVTLEPCSHYGRTPPCAEGLIKAKVAKVICAMEDPNPQVAGRGI 117

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
           +    A      E+  G+ E  +  +   F K 
Sbjct: 118 KMLCDAG----IEVQVGLLESDAMALNSAFIKR 146


>gi|242042489|ref|XP_002468639.1| hypothetical protein SORBIDRAFT_01g049430 [Sorghum bicolor]
 gi|241922493|gb|EER95637.1| hypothetical protein SORBIDRAFT_01g049430 [Sorghum bicolor]
          Length = 396

 Score = 97.3 bits (242), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 32/149 (21%), Positives = 59/149 (39%), Gaps = 21/149 (14%)

Query: 4   GNVFMSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
              +M   +E A+ AA      P VG V V + +++    +     K    HAE+ A+R 
Sbjct: 52  DAQYMRRCVELARKAAGHTSPNPMVGCVIVRDGRVVGEGFH----PKAGQPHAEVFALRD 107

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
              +           YV+LEPC        C  A+  A+++ +  G ++P       G +
Sbjct: 108 AGNLAEN-----ATAYVSLEPCNHYGRTPPCTEALINAKVKEVVVGMTDPNPIVASKGIE 162

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDF 144
               A  +    +  G+ E   R++ + +
Sbjct: 163 KLQGAGIN----VRVGVEEALCRKLNEAY 187


>gi|186680558|ref|YP_001863754.1| riboflavin biosynthesis protein RibD [Nostoc punctiforme PCC 73102]
 gi|186463010|gb|ACC78811.1| riboflavin biosynthesis protein RibD [Nostoc punctiforme PCC 73102]
          Length = 407

 Score = 97.3 bits (242), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 34/152 (22%), Positives = 55/152 (36%), Gaps = 19/152 (12%)

Query: 4   GNVFMSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
            +  M   LE A+ A  R    P VGAV V + +I+    +          HAE+ A++ 
Sbjct: 39  DSRMMLRCLELARRALGRTSPNPLVGAVIVKDGEIVGEGFHPRAGE----PHAEVFALQA 94

Query: 62  G---CRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
                    +       +YV LEPC        C+  +  A + ++  G  +P       
Sbjct: 95  AGVGAASPQENRARGATIYVNLEPCNHYGRTPPCSEGLIQAGVAKVVVGMVDPNPLVAGG 154

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
           G      A      E+  G+ E    Q+ + F
Sbjct: 155 GIARLRAAG----IEVLVGVEESACHQLNEAF 182


>gi|262404604|ref|ZP_06081159.1| diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Vibrio sp. RC586]
 gi|262349636|gb|EEY98774.1| diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Vibrio sp. RC586]
          Length = 367

 Score = 97.3 bits (242), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 35/152 (23%), Positives = 54/152 (35%), Gaps = 21/152 (13%)

Query: 4   GNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
            +  MS A+E A       +  P VG V     +I+    +          HAE+ A+R 
Sbjct: 8   DHQMMSRAIELAWRGRFTTSPNPNVGCVITRGEQIVGEGFHFRAGE----PHAEVHAMRQ 63

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
              +           YVTLEPC        CA  +  A + ++     +P       G Q
Sbjct: 64  AGELT-----RGATAYVTLEPCSHYGRTPPCAEGLVKAGVAKVICAMQDPNPQVAGRGVQ 118

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
               A      E+  G+ E  +R + + F K 
Sbjct: 119 MLRDAG----IEVEVGLLEADARALNRGFLKR 146


>gi|317969093|ref|ZP_07970483.1| riboflavin biosynthesis protein ribD
           (diaminohydroxyphosphoribosylaminopyrimidine deaminase /
           [Synechococcus sp. CB0205]
          Length = 371

 Score = 97.3 bits (242), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 34/150 (22%), Positives = 55/150 (36%), Gaps = 22/150 (14%)

Query: 7   FMSCALEEAQNAALRNEI-P-VGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
           +M  AL+ A   A R    P VG V +     ++    +R       T HAE+ A+    
Sbjct: 20  WMQRALQLAALGAGRTSPNPLVGCVVLDRQGALVGEGFHRRA----GTPHAEVHALSQAG 75

Query: 64  RILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFY 117
                E        V+LEPC        C+ A+  A +RR+     +P       G    
Sbjct: 76  -----ERAQGGTAIVSLEPCCHHGRTPPCSEALIAAGVRRVVVAMRDPDPRVAGGGIAQL 130

Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
             A      E+  G+ E  ++ + + F + 
Sbjct: 131 QAAG----IEVISGVCEAEAQALNRSFIQR 156


>gi|299067739|emb|CBJ38948.1| bifunctional protein: diaminohydroxyphosphoribosylaminopyrimidine
           deaminase (N-terminal);
           5-amino-6-(5-phosphoribosylamino) uracil reductase
           [Ralstonia solanacearum CMR15]
          Length = 370

 Score = 97.3 bits (242), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 38/150 (25%), Positives = 55/150 (36%), Gaps = 20/150 (13%)

Query: 4   GNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
            +  M  AL  A+N       P   VG V V ++ +I     +     D   HAEI AI+
Sbjct: 6   DHAMMQRALALAENGLFTT-TPNPRVGCVLVRDDTVIGEGFTQP-AGHD---HAEIQAIK 60

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
                           YVTLEPC        CA  +  A I R+     +P       G 
Sbjct: 61  DAQARGHDVR--GATAYVTLEPCSHFGRTPPCADRLIEAGIARVVTAMEDPNPTVSGRGL 118

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
           Q    A      ++  G+ E+ +R++   F
Sbjct: 119 QRLRQAG----IDVRCGLLEREARELNIGF 144


>gi|325282059|ref|YP_004254601.1| riboflavin biosynthesis protein RibD [Odoribacter splanchnicus DSM
           20712]
 gi|324313868|gb|ADY34421.1| riboflavin biosynthesis protein RibD [Odoribacter splanchnicus DSM
           20712]
          Length = 397

 Score = 97.3 bits (242), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 41/157 (26%), Positives = 59/157 (37%), Gaps = 26/157 (16%)

Query: 1   MK-KGNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAE 55
           M+ K   +M+ A   A     R  +   P VGAV V + +II    +          HAE
Sbjct: 21  METKDREYMNRARILADRG--RGWVNPNPLVGAVIVKDGRIIGEGWHERYGGL----HAE 74

Query: 56  ILAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGG 109
             A +        E      LYVTLEPC        C  A+   RI R+  G  +P    
Sbjct: 75  RNAFKQ-----CTEDPAGATLYVTLEPCCHYGKTPPCTEAVIENRIARVVVGLLDPNPLV 129

Query: 110 IENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
              G +    A       +  G+ E++ R+  + F K
Sbjct: 130 AGKGIEMLRKAG----IVVETGVEEEKLREQNRVFLK 162


>gi|145589924|ref|YP_001156521.1| CMP/dCMP deaminase, zinc-binding [Polynucleobacter necessarius
           subsp. asymbioticus QLW-P1DMWA-1]
 gi|145048330|gb|ABP34957.1| CMP/dCMP deaminase, zinc-binding protein [Polynucleobacter
           necessarius subsp. asymbioticus QLW-P1DMWA-1]
          Length = 186

 Score = 97.3 bits (242), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 29/133 (21%), Positives = 51/133 (38%), Gaps = 17/133 (12%)

Query: 25  PVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEP 82
           P GA      + KI+++  N+     +   H E++ I         +    + LY T EP
Sbjct: 54  PFGAAITNSKSGKILAQGVNKTFS--NPVLHGEMVCINQYVAQHGNQGWANLILYTTGEP 111

Query: 83  CTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT-------CHHSPEIYPGISEQ 135
           C MC +A+  + I  + YG+S       ++G   +T +             ++  GI E 
Sbjct: 112 CPMCMSALIWSGIGGVVYGSSANTIK--KSGIDIFTFSAKEINQGNNFSQTQLLGGILEA 169

Query: 136 RSRQIIQDFFKER 148
               +    F  R
Sbjct: 170 ECDSL----FANR 178


>gi|262170762|ref|ZP_06038440.1| diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Vibrio mimicus MB-451]
 gi|261891838|gb|EEY37824.1| diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Vibrio mimicus MB-451]
          Length = 367

 Score = 96.9 bits (241), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 35/152 (23%), Positives = 54/152 (35%), Gaps = 21/152 (13%)

Query: 4   GNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
            +  MS A+E A       +  P VG V     +I+    +          HAE+ A+R 
Sbjct: 8   DHQMMSRAIELAWRGRFTTSPNPNVGCVITRGEQIVGEGFHFRAGE----PHAEVHAMRQ 63

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
              +           YVTLEPC        CA  +  A + ++     +P       G Q
Sbjct: 64  AGELTH-----GATAYVTLEPCSHYGRTPPCAEGLIKAGVAKVICAMQDPNPQVAGRGVQ 118

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
               A      E+  G+ E  +R + + F K 
Sbjct: 119 MLRDAG----IEVEVGLLEADARALNRGFLKR 146


>gi|190572771|ref|YP_001970616.1| putative deaminase [Stenotrophomonas maltophilia K279a]
 gi|190010693|emb|CAQ44302.1| putative deaminase [Stenotrophomonas maltophilia K279a]
          Length = 361

 Score = 96.9 bits (241), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 33/149 (22%), Positives = 57/149 (38%), Gaps = 21/149 (14%)

Query: 4   GNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
            ++ M+ AL  A+ AA   R    VG V     +++ +  ++         HAE+ A+R 
Sbjct: 9   DHLHMANALRLAERAAYTTRPNPMVGCVIAHGERVVGQGWHQRAGG----PHAEVFALRE 64

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
                          YVTLEPC        CA A+  A + R+     +P       G  
Sbjct: 65  AG-----SEARGATAYVTLEPCAHYGRTPPCALALIEAGVSRVVAAMRDPFPKVDGGGFD 119

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDF 144
                  +   E+  G+   ++R++ + F
Sbjct: 120 LLR----NAGIEVAEGLMAAQARELNKGF 144


>gi|149378281|ref|ZP_01895992.1| riboflavin biosynthesis protein RibD [Marinobacter algicola DG893]
 gi|149357446|gb|EDM45957.1| riboflavin biosynthesis protein RibD [Marinobacter algicola DG893]
          Length = 371

 Score = 96.9 bits (241), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 32/153 (20%), Positives = 52/153 (33%), Gaps = 21/153 (13%)

Query: 3   KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +   FM+ A++ A       +  P VG V    +K++    +         AHAE  A+ 
Sbjct: 5   QDTAFMARAVQLAWRGRYSTHPNPRVGCVIARGSKVLGEGWHERAGE----AHAETRALS 60

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
                           YVTLEPC        CA A+  A I  ++    +P       G 
Sbjct: 61  QAG-----PDARGATAYVTLEPCSHFGRTPPCAKALIEAGIAHVFAATKDPNPSVSGRGL 115

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
                A       +  G+  + + ++   F K 
Sbjct: 116 DMLREAG----IRVTEGLLAEEAVRLNPGFMKR 144


>gi|258627340|ref|ZP_05722124.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Vibrio
           mimicus VM603]
 gi|258580378|gb|EEW05343.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Vibrio
           mimicus VM603]
          Length = 367

 Score = 96.9 bits (241), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 35/152 (23%), Positives = 54/152 (35%), Gaps = 21/152 (13%)

Query: 4   GNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
            +  MS A+E A       +  P VG V     +I+    +          HAE+ A+R 
Sbjct: 8   DHQMMSRAIELAWRGRFTTSPNPNVGCVITRGEQIVGEGFHFRAGE----PHAEVHAMRQ 63

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
              +           YVTLEPC        CA  +  A + ++     +P       G Q
Sbjct: 64  AGELT-----RGATAYVTLEPCSHYGRTPPCAEGLIKAGVAKVICAMQDPNPQVAGRGVQ 118

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
               A      E+  G+ E  +R + + F K 
Sbjct: 119 MLRDAG----IEVEVGLLEADARALNRGFLKR 146


>gi|16331497|ref|NP_442225.1| riboflavin biosynthesis protein [Synechocystis sp. PCC 6803]
 gi|2833460|sp|Q55158|RIBD_SYNY3 RecName: Full=Riboflavin biosynthesis protein RibD; Includes:
           RecName:
           Full=Diaminohydroxyphosphoribosylaminopyrimidine
           deaminase; Short=DRAP deaminase; AltName:
           Full=Riboflavin-specific deaminase; Includes: RecName:
           Full=5-amino-6-(5-phosphoribosylamino)uracil reductase;
           AltName: Full=HTP reductase
 gi|1001153|dbj|BAA10295.1| riboflavin biosynthesis protein [Synechocystis sp. PCC 6803]
          Length = 368

 Score = 96.9 bits (241), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 36/157 (22%), Positives = 59/157 (37%), Gaps = 22/157 (14%)

Query: 1   MKKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           M      M   L  A+ A       P VG+V V  ++I+ +  +   +      H EI A
Sbjct: 1   MISDQTHMRRCLTLAKTAIGKTAPNPLVGSVIVQGDEIVGQGFH--PQAGQP--HGEIFA 56

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
           +       + +      LYV LEPC        C  AI  A I ++  G  +P       
Sbjct: 57  L-----WEAGDRAKGATLYVNLEPCNHQGRTPPCTEAIIQAGIAKVVVGMVDPNPLVAGK 111

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDF-FKER 148
           G      A      E+  G+ E+  +++ + F F+ +
Sbjct: 112 GISRLRQAG----IEVKVGVEEEACQRLNEAFCFRIK 144


>gi|254286058|ref|ZP_04961019.1| riboflavin biosynthesis protein RibD [Vibrio cholerae AM-19226]
 gi|150423968|gb|EDN15908.1| riboflavin biosynthesis protein RibD [Vibrio cholerae AM-19226]
          Length = 367

 Score = 96.9 bits (241), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 35/152 (23%), Positives = 54/152 (35%), Gaps = 21/152 (13%)

Query: 4   GNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
            +  MS A+E A       +  P VG V     +I+    +          HAE+ A+R 
Sbjct: 8   DHQMMSRAIELAWRGRFTTSPNPNVGCVITRGEQIVGEGFHFRAGE----PHAEVHAMRQ 63

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
              +           YVTLEPC        CA  +  A + ++     +P       G Q
Sbjct: 64  AGELTH-----GATAYVTLEPCSHYGRTPPCAEGLIKAGVAKVICAMQDPNPQVAGRGVQ 118

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
               A      E+  G+ E  +R + + F K 
Sbjct: 119 MLRDAG----IEVEVGLLEADARALNRGFLKR 146


>gi|225629653|ref|ZP_03787646.1| riboflavin biosynthesis protein RibD [Wolbachia endosymbiont of
           Muscidifurax uniraptor]
 gi|225591494|gb|EEH12541.1| riboflavin biosynthesis protein RibD [Wolbachia endosymbiont of
           Muscidifurax uniraptor]
          Length = 130

 Score = 96.9 bits (241), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 35/144 (24%), Positives = 53/144 (36%), Gaps = 25/144 (17%)

Query: 3   KGNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
             + FMS AL  A+       +   P VG V V +  I+S              HAE++A
Sbjct: 2   TDDHFMSIALRLAEKNL--GNVAPNPAVGCVIVKDGTIVSEGY----TGIGGRPHAEVVA 55

Query: 59  IRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIEN 112
           ++               +Y+TLEPC        C A I  A I+R+     +P       
Sbjct: 56  LQNAKDSTH-----GATIYITLEPCCHHGVTGPCTAKIIKASIKRVVIATIDPDSRVSGR 110

Query: 113 GTQFYTLATCHHSPEIYPGISEQR 136
           G +    A      E+  GI ++ 
Sbjct: 111 GMKALKEAG----IEVEQGIMQKE 130


>gi|88811147|ref|ZP_01126403.1| riboflavin biosynthesis protein RibD [Nitrococcus mobilis Nb-231]
 gi|88791686|gb|EAR22797.1| riboflavin biosynthesis protein RibD [Nitrococcus mobilis Nb-231]
          Length = 376

 Score = 96.9 bits (241), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 37/154 (24%), Positives = 56/154 (36%), Gaps = 21/154 (13%)

Query: 4   GNVFMSCALEEAQNAA-LRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
              +M+ AL  A+         P VG V V N +++    +R         HAEI     
Sbjct: 14  DRQYMAHALRLAKRGLFSTGPNPRVGCVIVRNGQLVGEGWHRRAGE----PHAEIN---- 65

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
                + +      LYVTLEPC        C  A+  A I R+     +P       G +
Sbjct: 66  -ALAAAGQAARGAILYVTLEPCCHHGRTPPCTTALLSAGITRVIAACKDPNPRVAGQGLE 124

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             T A          G+  ++++ +   FFK  R
Sbjct: 125 QLTAAG----ITTRHGLMAEQAQTLNPGFFKRMR 154


>gi|229524273|ref|ZP_04413678.1| diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Vibrio cholerae bv. albensis VL426]
 gi|229337854|gb|EEO02871.1| diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Vibrio cholerae bv. albensis VL426]
          Length = 367

 Score = 96.9 bits (241), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 35/152 (23%), Positives = 54/152 (35%), Gaps = 21/152 (13%)

Query: 4   GNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
            +  MS A+E A       +  P VG V     +I+    +          HAE+ A+R 
Sbjct: 8   DHQMMSRAIELAWRGRFTTSPNPNVGCVITRGEQIVGEGFHFRAGE----PHAEVHAMRQ 63

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
              +           YVTLEPC        CA  +  A + ++     +P       G Q
Sbjct: 64  AAELT-----RGATAYVTLEPCSHYGRTPPCAEGLIKAGVAKVICAMQDPNPQVAGKGVQ 118

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
               A      E+  G+ E  +R + + F K 
Sbjct: 119 MLRDAG----IEVEVGLLEADARALNRGFLKR 146


>gi|294508343|ref|YP_003572401.1| riboflavin biosynthesis protein RibD [Salinibacter ruber M8]
 gi|294344671|emb|CBH25449.1| riboflavin biosynthesis protein RibD [Salinibacter ruber M8]
          Length = 397

 Score = 96.9 bits (241), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 35/153 (22%), Positives = 56/153 (36%), Gaps = 21/153 (13%)

Query: 4   GNVFMSCALEEAQNAALRNEI---P-VGAVAVL-NNKIISRAGNRNRELKDVTAHAEILA 58
              +M   L+ A+  A    +   P VGAV +  +  ++    +R         HAE  A
Sbjct: 24  HVPWMKRCLDLARTGA--GTVSPNPMVGAVLLAPDGTVLGEGAHRTYGG----PHAEARA 77

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
           ++   +  S   L    LYV LEPC        C   I    + R+  G  +P       
Sbjct: 78  LQAAEQQHSPAALQNATLYVNLEPCRHHGKTPPCTDLIVEKNVPRVVVGTVDPFPQAQGR 137

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
           G +           E+  G+ E   R++ + FF
Sbjct: 138 GIRQLREQG----VEVEVGVHEHACRRLNEAFF 166


>gi|209694491|ref|YP_002262419.1| pyrimidine deaminase/pyrimidine reductase (riboflavin biosynthesis
           protein RibD) [Aliivibrio salmonicida LFI1238]
 gi|208008442|emb|CAQ78607.1| pyrimidine deaminase/pyrimidine reductase (riboflavin biosynthesis
           protein RibD) [Aliivibrio salmonicida LFI1238]
          Length = 373

 Score = 96.9 bits (241), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 35/150 (23%), Positives = 52/150 (34%), Gaps = 21/150 (14%)

Query: 3   KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           + ++ M  A++ A+         P VG V V N  I+    +          HAE+ A+R
Sbjct: 6   QDHLMMQRAIQLAKRGIYTTAPNPNVGCVLVKNGLIVGEGAHLKAGE----PHAEVHALR 61

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
                   E       YVTLEPC        CA  +  A + ++     +P       G 
Sbjct: 62  QA-----SENAKGATAYVTLEPCSHYGRTPPCAEGLIKAGVVKVICAMVDPNPQVAGRGL 116

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
                A      E   G+ E  SR +   F
Sbjct: 117 AMLEAAG----IETASGLLETESRALNPSF 142


>gi|116193885|ref|XP_001222755.1| hypothetical protein CHGG_06660 [Chaetomium globosum CBS 148.51]
 gi|88182573|gb|EAQ90041.1| hypothetical protein CHGG_06660 [Chaetomium globosum CBS 148.51]
          Length = 551

 Score = 96.9 bits (241), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 24/69 (34%), Positives = 35/69 (50%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
            + FM  AL+ A+ A   NE PVG V V   ++I+R  N     ++ T HAE++AI    
Sbjct: 216 HSRFMREALDMARLALKTNETPVGCVLVYKGRVIARGMNATNVTRNGTRHAELMAISALL 275

Query: 64  RILSQEILP 72
             L +  L 
Sbjct: 276 SYLPKSDLE 284



 Score = 67.2 bits (164), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 19/49 (38%), Positives = 29/49 (59%)

Query: 72  PEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
            E  LYVT+EPC MCA+ +    I+++Y+GA N K GG     + +  +
Sbjct: 346 TECTLYVTVEPCVMCASLLRQFGIKKVYFGAVNDKFGGTGGVFRIHKNS 394


>gi|153826812|ref|ZP_01979479.1| riboflavin biosynthesis protein RibD [Vibrio cholerae MZO-2]
 gi|149739399|gb|EDM53641.1| riboflavin biosynthesis protein RibD [Vibrio cholerae MZO-2]
          Length = 367

 Score = 96.9 bits (241), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 35/152 (23%), Positives = 54/152 (35%), Gaps = 21/152 (13%)

Query: 4   GNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
            +  MS A+E A       +  P VG V     +I+    +          HAE+ A+R 
Sbjct: 8   DHQMMSRAIELAWRGRFTTSPNPNVGCVITRGEQIVGEGFHFRAGE----PHAEVHAMRQ 63

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
              +           YVTLEPC        CA  +  A + ++     +P       G Q
Sbjct: 64  AGELT-----RGATAYVTLEPCSHYGRTPPCAEGLIKAGVAKVICAMQDPNPQVAGKGVQ 118

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
               A      E+  G+ E  +R + + F K 
Sbjct: 119 MLRDAG----IEVEVGLLEADARALNRGFLKR 146


>gi|153803015|ref|ZP_01957601.1| riboflavin biosynthesis protein RibD [Vibrio cholerae MZO-3]
 gi|124121458|gb|EAY40201.1| riboflavin biosynthesis protein RibD [Vibrio cholerae MZO-3]
          Length = 367

 Score = 96.9 bits (241), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 35/152 (23%), Positives = 54/152 (35%), Gaps = 21/152 (13%)

Query: 4   GNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
            +  MS A+E A       +  P VG V     +I+    +          HAE+ A+R 
Sbjct: 8   DHQMMSRAIELAWRGRFTTSPNPNVGCVITRGEQIVGEGFHFRAGE----PHAEVHAMRQ 63

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
              +           YVTLEPC        CA  +  A + ++     +P       G Q
Sbjct: 64  AGELT-----RGATAYVTLEPCSHYGRTPPCAEGLIKAGVAKVICAMQDPNPQVAGKGVQ 118

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
               A      E+  G+ E  +R + + F K 
Sbjct: 119 MLRDAG----IEVEVGLLEADARALNRGFLKR 146


>gi|119774153|ref|YP_926893.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase.,
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Shewanella amazonensis SB2B]
 gi|119766653|gb|ABL99223.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Shewanella amazonensis SB2B]
          Length = 378

 Score = 96.9 bits (241), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 32/150 (21%), Positives = 52/150 (34%), Gaps = 22/150 (14%)

Query: 4   GNVFMSCALEEAQNA-ALRNEIP-VGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIR 60
               M+ A+  A+         P VG V V +   I+    +          HAE+ A++
Sbjct: 11  DRAMMARAIMLAKRGQYTTRPNPNVGCVIVNDAGDIVGEGWHIRAGG----PHAEVHALK 66

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
                           YVTLEPC        CA A+    ++R+    ++P       G 
Sbjct: 67  AAADKA-----RGATAYVTLEPCSHYGRTPPCAKALIDNGLKRVVVAMTDPNPQVAGRGI 121

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
           +    A      E+  G+ E  +R +   F
Sbjct: 122 KLLQDAG----IEVAHGLMEAEARALNPGF 147


>gi|262190240|ref|ZP_06048514.1| diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Vibrio cholerae CT 5369-93]
 gi|262033885|gb|EEY52351.1| diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Vibrio cholerae CT 5369-93]
          Length = 365

 Score = 96.9 bits (241), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 35/152 (23%), Positives = 54/152 (35%), Gaps = 21/152 (13%)

Query: 4   GNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
            +  MS A+E A       +  P VG V     +I+    +          HAE+ A+R 
Sbjct: 6   DHQMMSRAIELAWRGRFTTSPNPNVGCVITRGEQIVGEGFHFRAGE----PHAEVHAMRQ 61

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
              +           YVTLEPC        CA  +  A + ++     +P       G Q
Sbjct: 62  AGELT-----RGATAYVTLEPCSHYGRTPPCAEGLIKAGVAKVICAMQDPNPQVAGKGVQ 116

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
               A      E+  G+ E  +R + + F K 
Sbjct: 117 MLRDAG----IEVEVGLLEADARALNRGFLKR 144


>gi|229528728|ref|ZP_04418118.1| diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Vibrio cholerae 12129(1)]
 gi|229332502|gb|EEN97988.1| diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Vibrio cholerae 12129(1)]
          Length = 367

 Score = 96.9 bits (241), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 35/152 (23%), Positives = 54/152 (35%), Gaps = 21/152 (13%)

Query: 4   GNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
            +  MS A+E A       +  P VG V     +I+    +          HAE+ A+R 
Sbjct: 8   DHQMMSRAIELAWRGRFTTSPNPNVGCVITRGEQIVGEGFHFRAGE----PHAEVHAMRQ 63

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
              +           YVTLEPC        CA  +  A + ++     +P       G Q
Sbjct: 64  AGELT-----RGATAYVTLEPCSHYGRTPPCAEGLIKAGVAKVICAMQDPNPQVAGKGVQ 118

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
               A      E+  G+ E  +R + + F K 
Sbjct: 119 MLRDAG----IEVEVGLLEADARALNRGFLKR 146


>gi|297580914|ref|ZP_06942839.1| riboflavin biosynthesis protein RibD [Vibrio cholerae RC385]
 gi|297534740|gb|EFH73576.1| riboflavin biosynthesis protein RibD [Vibrio cholerae RC385]
          Length = 367

 Score = 96.9 bits (241), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 35/152 (23%), Positives = 54/152 (35%), Gaps = 21/152 (13%)

Query: 4   GNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
            +  MS A+E A       +  P VG V     +I+    +          HAE+ A+R 
Sbjct: 8   DHQMMSRAIELAWRGRFTTSPNPNVGCVITRGEQIVGEGFHFRAGE----PHAEVHAMRQ 63

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
              +           YVTLEPC        CA  +  A + ++     +P       G Q
Sbjct: 64  AGELT-----RGATAYVTLEPCSHYGRTPPCAEGLIKAGVAKVICAMQDPNPQVAGKGVQ 118

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
               A      E+  G+ E  +R + + F K 
Sbjct: 119 MLRDAG----IEVEVGLLEADARALNRGFLKR 146


>gi|316934111|ref|YP_004109093.1| riboflavin biosynthesis protein RibD [Rhodopseudomonas palustris
           DX-1]
 gi|315601825|gb|ADU44360.1| riboflavin biosynthesis protein RibD [Rhodopseudomonas palustris
           DX-1]
          Length = 389

 Score = 96.5 bits (240), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 38/142 (26%), Positives = 47/142 (33%), Gaps = 21/142 (14%)

Query: 4   GNVFMSCALEEAQNAALR-NEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
              FM  AL   +    R    P VGAV V +  I+ R             HAE+ A+R 
Sbjct: 27  DQRFMQLALALGRRGQGRTGTNPAVGAVLVKDGVIVGRGW----TQDGGRPHAEVEALRR 82

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
                         LYVTLEPC        CA AI  A I R+     +P       G  
Sbjct: 83  AGEAA-----RGATLYVTLEPCSHHGRSPPCADAIVAAGIARVVSAIEDPNPLVAGQGHA 137

Query: 116 FYTLATCHHSPEIYPGISEQRS 137
               A       +  GI    +
Sbjct: 138 KLRAAG----IAVEIGICADEA 155


>gi|332709146|ref|ZP_08429113.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Lyngbya
           majuscula 3L]
 gi|332352057|gb|EGJ31630.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Lyngbya
           majuscula 3L]
          Length = 372

 Score = 96.5 bits (240), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 34/145 (23%), Positives = 53/145 (36%), Gaps = 23/145 (15%)

Query: 9   SCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
              ++ A+ A  R   P   VG V V N +I+    +          HAE+ A+      
Sbjct: 20  QRCIQLARQALGRT-TPNPLVGCVIVRNGEIVGEGFH--PAAGQP--HAEVFALSEAG-- 72

Query: 66  LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
              E      +YV LEPC        C  A+  A + ++  G  +P       G +    
Sbjct: 73  ---ENAQGATVYVNLEPCNHYGRTPPCTEALIKAGVAKVVVGMVDPDPRVSGKGIERLRA 129

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDF 144
           A      E+  G+ E   RQ+ + F
Sbjct: 130 AG----IEVVVGVEESACRQLNEGF 150


>gi|312131512|ref|YP_003998852.1| riboflavin biosynthesis protein ribd [Leadbetterella byssophila DSM
           17132]
 gi|311908058|gb|ADQ18499.1| riboflavin biosynthesis protein RibD [Leadbetterella byssophila DSM
           17132]
          Length = 322

 Score = 96.5 bits (240), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 36/151 (23%), Positives = 61/151 (40%), Gaps = 19/151 (12%)

Query: 7   FMSCALEEAQNAAL--RNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           +M  ALE A            VG V V N+KII    +R         HAE+ A+     
Sbjct: 3   YMKRALELAALGREWVSPNPMVGCVIVHNDKIIGEGFHRKYGQ----PHAEVNAVDS--- 55

Query: 65  ILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
           +  + +L E  +YVTLEPC        CA  +   +++++     +P       G     
Sbjct: 56  VEDKSLLSESTVYVTLEPCAHFGKTPPCAELLIKHKVKKVVVCNLDPFPQVAGKGITMLK 115

Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
               +   ++  G+ ++   ++ + FFK  R
Sbjct: 116 ----NAGIDVEVGLLQEEGEELNKRFFKRHR 142


>gi|325971563|ref|YP_004247754.1| CMP/dCMP deaminase zinc-binding protein [Spirochaeta sp. Buddy]
 gi|324026801|gb|ADY13560.1| CMP/dCMP deaminase zinc-binding protein [Spirochaeta sp. Buddy]
          Length = 169

 Score = 96.5 bits (240), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 33/126 (26%), Positives = 46/126 (36%), Gaps = 11/126 (8%)

Query: 15  AQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPE 73
           A  A  +   P GA+    +  I+   GN   E      HAE L +    R+ + + L  
Sbjct: 24  AHTAKEQGNHPFGALLADKDGNILLEQGNSYEEGGSA-MHAETLLLFKASRLYAPDFLAT 82

Query: 74  VDLYVTLEPCTMCAAAISLARIRRLYYGASNPK----GGGIENG--TQFYTLATCHHS-- 125
             LY   EPC MC  A+    +RRL YG +  K     G  E        +     H   
Sbjct: 83  CSLYTNAEPCVMCTGAMYWTNVRRLVYGITEAKLLELTGADEQNPTFDLPSHEVLAHGQK 142

Query: 126 -PEIYP 130
             E+  
Sbjct: 143 DIEVVG 148


>gi|153828188|ref|ZP_01980855.1| riboflavin biosynthesis protein RibD [Vibrio cholerae 623-39]
 gi|229522216|ref|ZP_04411633.1| diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Vibrio cholerae TM 11079-80]
 gi|148876277|gb|EDL74412.1| riboflavin biosynthesis protein RibD [Vibrio cholerae 623-39]
 gi|229341141|gb|EEO06146.1| diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Vibrio cholerae TM 11079-80]
          Length = 367

 Score = 96.5 bits (240), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 35/152 (23%), Positives = 54/152 (35%), Gaps = 21/152 (13%)

Query: 4   GNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
            +  MS A+E A       +  P VG V     +I+    +          HAE+ A+R 
Sbjct: 8   DHQMMSRAIELAWRGRFTTSPNPNVGCVITRGEQIVGEGFHFRAGE----PHAEVHAMRQ 63

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
              +           YVTLEPC        CA  +  A + ++     +P       G Q
Sbjct: 64  AGELT-----RGATAYVTLEPCSHYGRTPPCAEGLIKAGVAKVICAMQDPNPQVAGKGVQ 118

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
               A      E+  G+ E  +R + + F K 
Sbjct: 119 MLRDAG----IEVEVGLLEADARALNRGFLKR 146


>gi|296158395|ref|ZP_06841226.1| CMP/dCMP deaminase zinc-binding [Burkholderia sp. Ch1-1]
 gi|295891339|gb|EFG71126.1| CMP/dCMP deaminase zinc-binding [Burkholderia sp. Ch1-1]
          Length = 180

 Score = 96.5 bits (240), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 33/137 (24%), Positives = 53/137 (38%), Gaps = 16/137 (11%)

Query: 13  EEAQNAALRNEIPVGAVAVLNNK--IISRAGNRNRELKDVTAHAEILAIRMGCRILSQEI 70
             A+ A L    P GAV V  ++  ++   GN      D   HAE +  R+     + E 
Sbjct: 37  RVAERATLLGHHPFGAVLVGPDQETVLMEQGNV-----DTVNHAESVLARVAALNFTPEY 91

Query: 71  LPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPK-GGGIE--------NGTQFYTLAT 121
           L    LY ++EPC MCA  +  A I R+ +G +  +              +    Y    
Sbjct: 92  LWSCTLYTSVEPCCMCAGTMYWANIGRVVFGMTEKRLLEATGDHAENPTMSVDCRYVFDH 151

Query: 122 CHHSPEIYPGISEQRSR 138
           C    E+   ++E  + 
Sbjct: 152 CQKPVEVIGPVAEMEAE 168


>gi|119358266|ref|YP_912910.1| CMP/dCMP deaminase, zinc-binding [Chlorobium phaeobacteroides DSM
           266]
 gi|119355615|gb|ABL66486.1| CMP/dCMP deaminase, zinc-binding protein [Chlorobium
           phaeobacteroides DSM 266]
          Length = 197

 Score = 96.5 bits (240), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 33/145 (22%), Positives = 63/145 (43%), Gaps = 12/145 (8%)

Query: 12  LEEAQ-NAALRNEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQ 68
           +E A+ N   +   P GA      + K+++   N         AHAE++AI +  + LS 
Sbjct: 39  IELARLNTVEKTGGPFGAAVFESRSGKLVAAGVNVVVTSSCSHAHAEMVAILLAQQKLST 98

Query: 69  EIL-----PEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENG----TQFYTL 119
             L     P+ +L  + EPC MC  AI  + +++L +GA+               + +  
Sbjct: 99  YDLGLSSLPDHELVSSCEPCAMCFGAIIWSGVKKLVFGATGKTAKAAGFDEGPKPRLWIR 158

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDF 144
           A      E+ P +  + +  I++++
Sbjct: 159 ALEQRGIEVTPRVCCKEAEAILENY 183


>gi|307129900|ref|YP_003881916.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino) uracil
           reductase [Dickeya dadantii 3937]
 gi|306527429|gb|ADM97359.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino) uracil
           reductase [Dickeya dadantii 3937]
          Length = 370

 Score = 96.5 bits (240), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 37/155 (23%), Positives = 60/155 (38%), Gaps = 21/155 (13%)

Query: 3   KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
               +M+ ALE A+      +  P VG V V +++I+    ++         HAE+ A+R
Sbjct: 5   SDEFYMARALELARRGRFTTSPNPNVGCVIVRDDEIVGEGYHQKAGE----PHAEVHALR 60

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           M               YVTLEPC        CA A+  A + R+     +P       G 
Sbjct: 61  MAGDKA-----RGATAYVTLEPCSHHGRTPPCADALLAAGVARVVAAMQDPNPQVAGRGL 115

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
                A      E+   +  +++ +I + F K  R
Sbjct: 116 HRLQQAG----IEVRHSVLMEQAEKINRGFLKRMR 146


>gi|83815727|ref|YP_446405.1| riboflavin biosynthesis protein RibD [Salinibacter ruber DSM 13855]
 gi|83757121|gb|ABC45234.1| riboflavin biosynthesis protein RibD [Salinibacter ruber DSM 13855]
          Length = 373

 Score = 96.5 bits (240), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 35/150 (23%), Positives = 56/150 (37%), Gaps = 21/150 (14%)

Query: 7   FMSCALEEAQNAALRNEI---P-VGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRM 61
           +M   L+ A+  A    +   P VGAV +  +  ++    +R         HAE  A++ 
Sbjct: 3   WMKRCLDLARTGA--GTVSPNPMVGAVLLAPDGTVLGEGAHRTYGG----PHAEARALQA 56

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
             +  S   L    LYV LEPC        C   I    + R+  G  +P       G +
Sbjct: 57  AEQQHSPAALQNATLYVNLEPCRHHGKTPPCTDLIVEKNVPRVVVGTVDPFPQAQGRGIR 116

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
                      E+  G+ E   R++ + FF
Sbjct: 117 QLREQG----VEVEVGVHEHACRRLNEAFF 142


>gi|306821102|ref|ZP_07454718.1| tRNA(Ile)-lysidine synthase (tRNA(Ile)-lysidinesynthetase)
           [Eubacterium yurii subsp. margaretiae ATCC 43715]
 gi|304550795|gb|EFM38770.1| tRNA(Ile)-lysidine synthase (tRNA(Ile)-lysidinesynthetase)
           [Eubacterium yurii subsp. margaretiae ATCC 43715]
          Length = 108

 Score = 96.5 bits (240), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 30/103 (29%), Positives = 44/103 (42%), Gaps = 4/103 (3%)

Query: 50  VTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPK--- 106
            T HAE   IR  C       L E  LY + EPC MC+ A+   ++ RL YGASN +   
Sbjct: 3   PTVHAEAGLIREFCAKTGISNLQEYTLYSSCEPCFMCSGAMVWVKLGRLVYGASNMELEN 62

Query: 107 -GGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKER 148
             G                 PE+  G+    S +++++ F + 
Sbjct: 63  ILGNEGCNCSKLVFDNSFWKPEVTEGVLRDESLEVLKEHFSKH 105


>gi|163755421|ref|ZP_02162541.1| riboflavin biosynthesis protein RibD [Kordia algicida OT-1]
 gi|161324841|gb|EDP96170.1| riboflavin biosynthesis protein RibD [Kordia algicida OT-1]
          Length = 340

 Score = 96.5 bits (240), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 36/154 (23%), Positives = 59/154 (38%), Gaps = 24/154 (15%)

Query: 8   MSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           M   L+ A N      +P   VGA+ V N+ II               HAE+ A+     
Sbjct: 1   MKRCLQLAANGLPTA-MPNPSVGAIIVHNDMIIGEGYTSAYGGN----HAEVNAVHS--- 52

Query: 65  ILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
           +  + +L E  +YV+LEPC        C+  I   +I ++  G  +P       G +   
Sbjct: 53  VKDKSLLKEATMYVSLEPCSHFGKTPPCSDLIIKHQIPKVVIGTIDPFAKVAGKGIEKLQ 112

Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFF---KERR 149
            A C    E+   + +       + FF   + +R
Sbjct: 113 NAGC----EVILNVLKDECIASNKRFFTFHQHKR 142


>gi|62185466|ref|YP_220251.1| riboflavin biosynthesis protein RibD [Chlamydophila abortus S26/3]
 gi|62148533|emb|CAH64304.1| riboflavin biosynthesis protein RibD [Chlamydophila abortus S26/3]
          Length = 368

 Score = 96.5 bits (240), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 35/155 (22%), Positives = 60/155 (38%), Gaps = 21/155 (13%)

Query: 2   KKGNVFMSCALEEAQN-AALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
           ++   FM  A+E  +  A      P VG V V N +II    +   +      HAE  AI
Sbjct: 6   EQQLFFMRRAIELGEKGAFSSQPNPWVGCVIVKNGRIIGEGYH--EKAGQP--HAEEKAI 61

Query: 60  RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113
           R        E +   ++YVTLEPC        C   +   ++  +Y    +P       G
Sbjct: 62  RSA-----SESIEGSEVYVTLEPCCHYGNTPPCVNLLIKYKVAAVYIALLDPDSRVSGRG 116

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKER 148
                 A       +Y G+ ++ + + ++ +  +R
Sbjct: 117 AASLRKAG----ICVYEGLGKEEAERSLKSYIYQR 147


>gi|258405543|ref|YP_003198285.1| riboflavin biosynthesis protein RibD [Desulfohalobium retbaense DSM
           5692]
 gi|257797770|gb|ACV68707.1| riboflavin biosynthesis protein RibD [Desulfohalobium retbaense DSM
           5692]
          Length = 384

 Score = 96.5 bits (240), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 47/158 (29%), Positives = 62/158 (39%), Gaps = 31/158 (19%)

Query: 8   MSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTA----HAEILAIR 60
           M  A+E  +    R   P   VGAV   N  +++   +        TA    HAE+ AI 
Sbjct: 1   MQHAVELGETGFGRT-APNPCVGAVITRNGAVMAEGYH--------TACGAPHAEVEAIA 51

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
                 +   L E  L+VTLEPC        C  AI  A IR +  G  +P       GT
Sbjct: 52  QA--RAAGVDLSECTLWVTLEPCNHHGRTPPCTKAIIEAGIRSVGIGTLDPNPHVGGGGT 109

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF---KERR 149
            F          E+  GI E   R +I DF    +E+R
Sbjct: 110 AFLRDQG----VEVEVGILEPACRDLIADFLLWQQEKR 143


>gi|17545434|ref|NP_518836.1| diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Ralstonia solanacearum GMI1000]
 gi|17427726|emb|CAD14245.1| probable riboflavin biosynthesis bifunctional ribd :
           diaminohydroxyphosphoribosylaminopyrimidine deaminase +
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           oxidoreductase protein [Ralstonia solanacearum GMI1000]
          Length = 370

 Score = 96.5 bits (240), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 37/150 (24%), Positives = 54/150 (36%), Gaps = 20/150 (13%)

Query: 4   GNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
            +  M  AL  A+N       P   VG V V ++ +I     +         HAEI AI+
Sbjct: 6   DHAMMQRALALAENGLFTT-TPNPRVGCVLVRDDTVIGEGFTQPAGQD----HAEIQAIK 60

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
                           YVTLEPC        CA  +  A I R+     +P       G 
Sbjct: 61  DAQARGHDVR--GATAYVTLEPCSHFGRTPPCADRLVEAGIARVVAAMEDPNPTVSGRGL 118

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
           Q    A      ++  G+ E+ +R++   F
Sbjct: 119 QRLREAG----IDVRCGLLEREARELNIGF 144


>gi|262274779|ref|ZP_06052590.1| diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Grimontia hollisae CIP 101886]
 gi|262221342|gb|EEY72656.1| diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Grimontia hollisae CIP 101886]
          Length = 373

 Score = 96.5 bits (240), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 33/151 (21%), Positives = 52/151 (34%), Gaps = 21/151 (13%)

Query: 4   GNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
            +  M  A+E A+         P VG V    + I+    +          HAE+ A+R 
Sbjct: 6   DSQMMLRAIELAKRGIYTTAPNPNVGCVITQGDDIVGEGFHFRAGE----PHAEVYALRA 61

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
                          YVTLEPC        CA A+  A + R+     +P       G Q
Sbjct: 62  AGEKAC-----GATAYVTLEPCSHHGRTPPCADALIAAGVSRVVCAMVDPNPKVAGRGIQ 116

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
               A      ++  G+ + ++  +   F K
Sbjct: 117 RMRDAG----IQVDVGLMQAQAEALNPGFIK 143


>gi|212716410|ref|ZP_03324538.1| hypothetical protein BIFCAT_01333 [Bifidobacterium catenulatum DSM
           16992]
 gi|212660663|gb|EEB21238.1| hypothetical protein BIFCAT_01333 [Bifidobacterium catenulatum DSM
           16992]
          Length = 310

 Score = 96.5 bits (240), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 34/153 (22%), Positives = 51/153 (33%), Gaps = 18/153 (11%)

Query: 1   MKKGNVFMSCALEEAQN-AALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           M +   +M+ ALE A   A   N  P VG V V + +I++   +          HAE +A
Sbjct: 23  MPQYRKYMTQALELAHKGAGWVNPNPLVGTVVVRDGEILAAGYHDRYRG----PHAERMA 78

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
                       +    +  TLEPC        C   I    I R+  G+ +P       
Sbjct: 79  FDYADEHGV--DMHGATVIDTLEPCCHVGSQPACTDLILSHGITRVVVGSIDPNPIVAGK 136

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
           G             E+   +       I + FF
Sbjct: 137 GLCILEENG----VEVVYDVMRAECDAINRHFF 165


>gi|325266968|ref|ZP_08133639.1| riboflavin biosynthesis protein RibD [Kingella denitrificans ATCC
           33394]
 gi|324981709|gb|EGC17350.1| riboflavin biosynthesis protein RibD [Kingella denitrificans ATCC
           33394]
          Length = 369

 Score = 96.5 bits (240), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 33/157 (21%), Positives = 52/157 (33%), Gaps = 24/157 (15%)

Query: 4   GNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
               M  A+E A       +  P VG V     +I+ +  +          HAE+ A+R 
Sbjct: 12  DAAHMRRAIELAWLGRFSTSPNPRVGCVIAHGGQIVGQGFHVQAGF----PHAEVHALRQ 67

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
              +           YVTLEPC        CA  +  A + R+     +P       G  
Sbjct: 68  AGDLA-----RGATAYVTLEPCSHHGRTPPCAEGLIAAGVARVVIAMGDPNPLVAGKGIA 122

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDF---FKERR 149
               A       +  G+    +R + + F    + RR
Sbjct: 123 LLQAAG----ISVQCGLLADEARALNRGFLSRIERRR 155


>gi|307718159|ref|YP_003873691.1| hypothetical protein STHERM_c04460 [Spirochaeta thermophila DSM
           6192]
 gi|306531884|gb|ADN01418.1| hypothetical protein STHERM_c04460 [Spirochaeta thermophila DSM
           6192]
          Length = 362

 Score = 96.5 bits (240), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 31/128 (24%), Positives = 49/128 (38%), Gaps = 19/128 (14%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC-- 83
           VGAV V + +++    +    L     HAE+ A+         E     ++YVTLEPC  
Sbjct: 29  VGAVVVKDGRVVGEGFHERAGL----PHAEVAALSEAG-----EEARGAEMYVTLEPCCH 79

Query: 84  ----TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139
                 C  AI  A +RR+     +P       G      A      E+  G+  + +R 
Sbjct: 80  WGRTPPCTDAILKAGVRRVVVACRDPNPQVAGKGLSILAEAG----VEVEVGVLSREARW 135

Query: 140 IIQDFFKE 147
           + + F   
Sbjct: 136 LNRGFISR 143


>gi|301055607|ref|YP_003793818.1| riboflavin biosynthesis protein contains N-terminal domain of RibD
           [Bacillus anthracis CI]
 gi|300377776|gb|ADK06680.1| riboflavin biosynthesis protein contains N-terminal domain of RibD
           [Bacillus cereus biovar anthracis str. CI]
          Length = 166

 Score = 96.5 bits (240), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 32/151 (21%), Positives = 53/151 (35%), Gaps = 21/151 (13%)

Query: 3   KGNVFMSCALEEAQN--AALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
               +M  AL+ A+           VGAV V +  I+    +     +    HAE+ A+ 
Sbjct: 2   TDQEYMRIALQLAEGTCGQTSPNPMVGAVVVKDGNIVGMGAHLRAGEE----HAEVHALH 57

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           M              +YVTLEPC        C   +    ++R+     +       NG 
Sbjct: 58  MAGDKA-----KGATVYVTLEPCSHFGKTPPCCELLIKKEVKRVVIATLDCNPLVSGNGK 112

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
           +    A      E+  G+ E  +  + + FF
Sbjct: 113 RKLEEAG----IEVTTGVLEAEAVLLNRYFF 139


>gi|87308856|ref|ZP_01090995.1| riboflavin bifunctional biosynthesis protein RibG [Blastopirellula
           marina DSM 3645]
 gi|87288567|gb|EAQ80462.1| riboflavin bifunctional biosynthesis protein RibG [Blastopirellula
           marina DSM 3645]
          Length = 373

 Score = 96.1 bits (239), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 33/146 (22%), Positives = 51/146 (34%), Gaps = 20/146 (13%)

Query: 3   KGNVFMSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
                M  AL+ A       E  P VG V V + ++I R  +          HAE    R
Sbjct: 6   DDERHMREALQLAALGQGAAEPNPMVGCVLVQHGQVIGRGYHAKYGG----PHAE----R 57

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
                   + +     YVTLEPC        C  A+  A++ R+     +P G     G 
Sbjct: 58  AALSDCGDKQVNGATAYVTLEPCCHHGKTPPCTDALIAAKVARVVIAQQDPFGLVDGGGI 117

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQI 140
                A       +  G+ E  ++++
Sbjct: 118 DQLKAAG----ISVQVGLLEAEAQRL 139


>gi|254556365|ref|YP_003062782.1| Pyrimidine reductase, riboflavin biosynthesis [Lactobacillus
           plantarum JDM1]
 gi|254045292|gb|ACT62085.1| Pyrimidine reductase, riboflavin biosynthesis [Lactobacillus
           plantarum JDM1]
          Length = 355

 Score = 96.1 bits (239), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 36/142 (25%), Positives = 63/142 (44%), Gaps = 20/142 (14%)

Query: 7   FMSCALEEAQNAALRN-EIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           FM  A+++A+ A +   + P VGAV V +  ++++  +          HAE+  +R    
Sbjct: 5   FMQMAIDQAKLAGVATYQNPQVGAVLVKDGHVLAQGYHHYFGGD----HAEVDVLRQ--- 57

Query: 65  ILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
            ++ E      L+VTLEPC        C+A I  A IR++  G  +P       G Q+  
Sbjct: 58  -VTPEQARGATLFVTLEPCSHYGKTPPCSARIVAAGIRQVVIGQLDPHPIVGGKGRQYL- 115

Query: 119 LATCHHSPEIYPGISEQRSRQI 140
               +H  ++  G    + R +
Sbjct: 116 ---LNHGVDVVTGCLTDKVRAL 134


>gi|127512119|ref|YP_001093316.1| riboflavin biosynthesis protein RibD [Shewanella loihica PV-4]
 gi|126637414|gb|ABO23057.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Shewanella loihica PV-4]
          Length = 386

 Score = 96.1 bits (239), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 33/154 (21%), Positives = 56/154 (36%), Gaps = 21/154 (13%)

Query: 4   GNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
            +  M+ A++ A+      +  P VG V V    ++    +          HAE+ A+RM
Sbjct: 11  DSQMMARAIKLARKGQYTTSPNPNVGCVIVQGETLVGEGFH--IAAGGP--HAEVHALRM 66

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
                          YVTLEPC        CA A+  A + R+    ++P       G +
Sbjct: 67  AGDKA-----KGATAYVTLEPCSHYGRTPPCAEALIKAEVSRVVVAVTDPNPQVSGRGIK 121

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
               A       +  G+ ++ +  +   F K  R
Sbjct: 122 MLQDAGIL----VEVGLHQEEAAALNPGFMKRMR 151


>gi|156186020|gb|ABU55328.1| cytidine and deoxycytidylate deaminase family protein
           [Callosobruchus chinensis]
          Length = 71

 Score = 96.1 bits (239), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 38/71 (53%), Positives = 47/71 (66%), Gaps = 3/71 (4%)

Query: 35  KIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLAR 94
            ++S A N      D TAHAE+LAI+  C +LS   L + D+YVTLEPC MCA AIS A 
Sbjct: 4   NVVSSAHN---ISNDPTAHAEMLAIKQECELLSTSTLYDSDIYVTLEPCPMCAQAISFAX 60

Query: 95  IRRLYYGASNP 105
           I+R Y+GA NP
Sbjct: 61  IKRXYFGAYNP 71


>gi|227514654|ref|ZP_03944703.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase
           [Lactobacillus fermentum ATCC 14931]
 gi|227086963|gb|EEI22275.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase
           [Lactobacillus fermentum ATCC 14931]
          Length = 345

 Score = 96.1 bits (239), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 36/153 (23%), Positives = 61/153 (39%), Gaps = 23/153 (15%)

Query: 8   MSCALEEAQNAA-LRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M  AL EA        + P VGAV V + ++++   +         AHAE  AI      
Sbjct: 1   MQLALAEAAKGGSATWKNPQVGAVIVKDGQLLATGYHHQYGQ----AHAERDAI----SK 52

Query: 66  LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
           LS E L    +YVTLEPC        C+  +  +   R+     +P       G      
Sbjct: 53  LSNEQLAGATIYVTLEPCFHYGKQPPCSQLLIDSHFARVVVATIDPHQVVGGKGIAQLKA 112

Query: 120 ATCHHSPEIYPGISEQRSRQIIQD---FFKERR 149
           A      ++  G+ + ++  + +    F++++R
Sbjct: 113 AG----IDVEVGLLKDQAEALNRHYFYFYRQQR 141


>gi|126727883|ref|ZP_01743711.1| riboflavin biosynthesis protein RibD [Rhodobacterales bacterium
           HTCC2150]
 gi|126702824|gb|EBA01929.1| riboflavin biosynthesis protein RibD [Rhodobacterales bacterium
           HTCC2150]
          Length = 364

 Score = 96.1 bits (239), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 38/155 (24%), Positives = 58/155 (37%), Gaps = 33/155 (21%)

Query: 3   KGNVFMSCALEE-AQNAALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTA-----HAE 55
               +M  A+   AQ        P VG V V + ++++RA          TA     HAE
Sbjct: 5   TDERWMRLAISLGAQRLGQTWPNPAVGCVIVKDGRVLARA---------ATAPGGRPHAE 55

Query: 56  ILAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGG 109
             A+                +YV+LEPC        CA A+  AR+ R+ YG  +P    
Sbjct: 56  TQALD-------GINAKGSTVYVSLEPCAHTGKTPPCAQALIDARVARVVYGMRDPDCRV 108

Query: 110 IENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
              GT   + A       +   + E+++    Q F
Sbjct: 109 DGKGTSMLSAAG----IAVTGPVLEKQALAANQGF 139


>gi|260063122|ref|YP_003196202.1| riboflavin biosynthesis protein RibD [Robiginitalea biformata
           HTCC2501]
 gi|88784691|gb|EAR15861.1| riboflavin biosynthesis protein RibD [Robiginitalea biformata
           HTCC2501]
          Length = 350

 Score = 96.1 bits (239), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 41/153 (26%), Positives = 58/153 (37%), Gaps = 21/153 (13%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57
           MK    +M   ++  +NA  R   P   VGA+    + II               HAE+ 
Sbjct: 1   MKIQEKYMLRCIQIGRNALGR-SAPNPMVGALLTHGDTIIGSGY--TSAFGGP--HAEVN 55

Query: 58  AIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIE 111
           AIR          LP+  LYVTLEPC        C   I  + IRR+  G  +P      
Sbjct: 56  AIRSVA---DPGKLPDSTLYVTLEPCCHHGKTPPCTDRIIESGIRRVVVGLPDPHDKVAG 112

Query: 112 NGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
            G      A C    ++  G++    R+  + F
Sbjct: 113 QGIAQLREAGC----QVEVGVAADACREHHKRF 141


>gi|297745271|emb|CBI40351.3| unnamed protein product [Vitis vinifera]
          Length = 348

 Score = 96.1 bits (239), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 30/145 (20%), Positives = 56/145 (38%), Gaps = 21/145 (14%)

Query: 8   MSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M   +E A+ A    +  P VG V V + K++    +     K    H E+ A+R    +
Sbjct: 1   MRRCVELARKAIGCTSPNPMVGCVIVKDGKVVGEGFH----PKAGQPHGEVFALRDAGDL 56

Query: 66  LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
                      YV+LEPC        C  A+  A+++++  G  +P       G      
Sbjct: 57  AEN-----ATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVIGMVDPNPIVASKGVDRLRD 111

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDF 144
           A      E+   + E+  +++ + +
Sbjct: 112 AG----IEVTVAVEEELCKKLNEAY 132


>gi|325962810|ref|YP_004240716.1| cytosine/adenosine deaminase [Arthrobacter phenanthrenivorans
           Sphe3]
 gi|323468897|gb|ADX72582.1| cytosine/adenosine deaminase [Arthrobacter phenanthrenivorans
           Sphe3]
          Length = 161

 Score = 96.1 bits (239), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 31/95 (32%), Positives = 45/95 (47%)

Query: 6   VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
            ++  A+E A         P GA+ V  +  +    NR     D TAHAE++AIR     
Sbjct: 12  KYLEQAVELATRNVSEGGGPFGALVVTPDGRVHEGVNRVTRDNDPTAHAEVVAIRAAAAA 71

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
            +   L    LY + EPC +C A+   ARI R+Y+
Sbjct: 72  TANYDLHGAVLYASCEPCPLCLASALWARIDRVYF 106


>gi|187924612|ref|YP_001896254.1| CMP/dCMP deaminase zinc-binding [Burkholderia phytofirmans PsJN]
 gi|187715806|gb|ACD17030.1| CMP/dCMP deaminase zinc-binding [Burkholderia phytofirmans PsJN]
          Length = 180

 Score = 96.1 bits (239), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 33/137 (24%), Positives = 52/137 (37%), Gaps = 16/137 (11%)

Query: 13  EEAQNAALRNEIPVGAVAVLNNK--IISRAGNRNRELKDVTAHAEILAIRMGCRILSQEI 70
             A+ A L    P GAV V  ++  ++   GN      D   HAE +  R+     + E 
Sbjct: 37  RVAERATLLGHHPFGAVLVGPDQETVLMEQGNV-----DTVNHAESVLARVAALNFTPEY 91

Query: 71  LPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPK-GGGIE--------NGTQFYTLAT 121
           L    LY ++EPC MCA  +  A I R+ +G +  +              +    Y    
Sbjct: 92  LWSCTLYTSVEPCCMCAGTMYWANIGRVVFGMTEKRLLEATGDHAENPTMSVDCRYVFDH 151

Query: 122 CHHSPEIYPGISEQRSR 138
           C    E+   + E  + 
Sbjct: 152 CQKPVEVIGPVPEVEAE 168


>gi|153216165|ref|ZP_01950304.1| riboflavin biosynthesis protein RibD [Vibrio cholerae 1587]
 gi|124114423|gb|EAY33243.1| riboflavin biosynthesis protein RibD [Vibrio cholerae 1587]
          Length = 367

 Score = 96.1 bits (239), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 35/152 (23%), Positives = 54/152 (35%), Gaps = 21/152 (13%)

Query: 4   GNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
            +  MS A+E A       +  P VG V     +I+    +          HAE+ A+R 
Sbjct: 8   DHQMMSRAIELAWRGRFTTSPNPNVGCVITRGEQIVGEGFHFRAGE----PHAEVHAMRQ 63

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
              +           YVTLEPC        CA  +  A + ++     +P       G Q
Sbjct: 64  ASELT-----RGATAYVTLEPCSHYGRTPPCAEGLIKAGVAKVICAMQDPNPQVAGKGVQ 118

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
               A      E+  G+ E  +R + + F K 
Sbjct: 119 MLRDAG----IEVEVGLLEADARALNRGFLKR 146


>gi|289209046|ref|YP_003461112.1| riboflavin biosynthesis protein RibD [Thioalkalivibrio sp. K90mix]
 gi|288944677|gb|ADC72376.1| riboflavin biosynthesis protein RibD [Thioalkalivibrio sp. K90mix]
          Length = 396

 Score = 96.1 bits (239), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 34/150 (22%), Positives = 55/150 (36%), Gaps = 21/150 (14%)

Query: 3   KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +    M+ ALE A       +  P VG V V   +++    +         +HAE+ A+ 
Sbjct: 11  EDRRHMARALELADLGRFSADPNPRVGCVLVREGEVVGEGLHWRAGE----SHAEVNAL- 65

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
                 + E      +YVTLEPC        C  A+  A + R+     +P       G 
Sbjct: 66  ----RAAGEAARGATVYVTLEPCSHHGRTPPCTEALIQAGVARVVIAMQDPNPQVCGGGM 121

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
           +    A      E+  G+ E  +R +   F
Sbjct: 122 EALRAAG----IEVETGVLEAEARALNPGF 147


>gi|197119395|ref|YP_002139822.1| bifunctional
           2,
           5-diamino-6-(5'-phosphoribosylamino)-4-(3H)-pyrimidinone
           deaminase/5-amino-6-(5'-phosphoribosylamino)uracil
           reductase [Geobacter bemidjiensis Bem]
 gi|197088755|gb|ACH40026.1| 2,5-diamino-6-(5'-phosphoribosylamino)-4-(3H)-pyrimidinone
           deaminase and 5-amino-6-(5'-phosphoribosylamino)uracil
           reductase [Geobacter bemidjiensis Bem]
          Length = 369

 Score = 96.1 bits (239), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 39/151 (25%), Positives = 60/151 (39%), Gaps = 21/151 (13%)

Query: 4   GNVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
               M  AL EA+    +      VG V V N +++    +     K  T HAE+ A+  
Sbjct: 5   HLKMMRLALAEARKGIGKTAPNPAVGCVIVRNGEVVGTGWH----KKAGTPHAEVHAL-- 58

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
                + +     D YVTLEPC        CA A+  AR+ R++    +P       G Q
Sbjct: 59  ---KAAGDKAAGADAYVTLEPCSHFGKTPPCAKALIEARVARVFVAMVDPNPLVSGRGIQ 115

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
               A       +  G+ ++ SR++   F K
Sbjct: 116 MLKDAG----IAVEVGLLKEESRELNLPFIK 142


>gi|126660826|ref|ZP_01731920.1| riboflavin biosynthesis protein [Cyanothece sp. CCY0110]
 gi|126617877|gb|EAZ88652.1| riboflavin biosynthesis protein [Cyanothece sp. CCY0110]
          Length = 364

 Score = 96.1 bits (239), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 35/149 (23%), Positives = 51/149 (34%), Gaps = 21/149 (14%)

Query: 4   GNVFMSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
               M   L  A+         P VGAV V + KII    +          HAE+ A+R 
Sbjct: 8   DQQMMQRCLTLARQGLGYTSPNPLVGAVIVKDGKIIGEGFHPKAGE----PHAEVFALRE 63

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
                         +YV LEPC        C  A+  A++ R+  G  +P       G  
Sbjct: 64  AGEKA-----VGGTVYVNLEPCNHYGRTPPCTEALISAKVARVVVGMVDPNPLVSGKGIA 118

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDF 144
               A      E+  G+ E    ++ + F
Sbjct: 119 RLQEAG----IEVTVGVEEAACLRLNEAF 143


>gi|170680144|ref|YP_001742551.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Escherichia coli SMS-3-5]
 gi|300937023|ref|ZP_07151889.1| riboflavin biosynthesis protein RibD [Escherichia coli MS 21-1]
 gi|170517862|gb|ACB16040.1| riboflavin biosynthesis protein RibD [Escherichia coli SMS-3-5]
 gi|300457854|gb|EFK21347.1| riboflavin biosynthesis protein RibD [Escherichia coli MS 21-1]
          Length = 367

 Score = 96.1 bits (239), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 35/155 (22%), Positives = 57/155 (36%), Gaps = 21/155 (13%)

Query: 3   KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +   +M+ AL+ AQ      +  P VG V V + + +    ++         HAE+ A+R
Sbjct: 2   QDEYYMARALKLAQRGRFTTHPNPNVGCVIVKDGETVGEGYHQRAGE----PHAEVHALR 57

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           M               YVTLEPC        C  A+  A + R+     +P       G 
Sbjct: 58  MAGEKA-----KGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVAAMQDPNPQVAGRGL 112

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
                A      ++  G+    + Q+ + F K  R
Sbjct: 113 YRLQQAG----IDVSHGLMMSEAEQLNKGFLKRMR 143


>gi|308180337|ref|YP_003924465.1| Pyrimidine reductase, riboflavin biosynthesis [Lactobacillus
           plantarum subsp. plantarum ST-III]
 gi|308045828|gb|ADN98371.1| Pyrimidine reductase, riboflavin biosynthesis [Lactobacillus
           plantarum subsp. plantarum ST-III]
          Length = 355

 Score = 96.1 bits (239), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 36/142 (25%), Positives = 63/142 (44%), Gaps = 20/142 (14%)

Query: 7   FMSCALEEAQNAALRN-EIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           FM  A+++A+ A +   + P VGAV V +  ++++  +          HAE+  +R    
Sbjct: 5   FMQMAIDQAKLAGVATYQNPQVGAVLVKDGHVLAQGYHHYFGGD----HAEVDVLRQ--- 57

Query: 65  ILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
            ++ E      L+VTLEPC        C+A I  A IR++  G  +P       G Q+  
Sbjct: 58  -VTPEQARGATLFVTLEPCSHYGKTPPCSARIVAAGIRQVVIGQLDPHPIVGGKGRQYL- 115

Query: 119 LATCHHSPEIYPGISEQRSRQI 140
               +H  ++  G    + R +
Sbjct: 116 ---LNHGVDVVTGCLTDKVRAL 134


>gi|254428944|ref|ZP_05042651.1| riboflavin biosynthesis protein RibD [Alcanivorax sp. DG881]
 gi|196195113|gb|EDX90072.1| riboflavin biosynthesis protein RibD [Alcanivorax sp. DG881]
          Length = 387

 Score = 96.1 bits (239), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 35/152 (23%), Positives = 55/152 (36%), Gaps = 21/152 (13%)

Query: 4   GNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
            + FMS AL+ A++     +  P VG V V    ++    +          HAE  A+  
Sbjct: 7   DHQFMSRALQLARHGLYTTDPNPRVGCVLVRGGAVVGEGFHARAGEL----HAERHALAA 62

Query: 62  GCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQ 115
                  +       YVTLEPC+       CA A+  A + R+     +P       G Q
Sbjct: 63  AG-----DRAQGATAYVTLEPCSHTGRTGPCADALVEAGVARVVAAMEDPNPQVAGQGLQ 117

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
               A       +  G+ E ++R +   F   
Sbjct: 118 RLADAG----IAVASGLLETQARDLNPGFIAR 145


>gi|254507822|ref|ZP_05119952.1| riboflavin biosynthesis protein RibD [Vibrio parahaemolyticus 16]
 gi|219549195|gb|EED26190.1| riboflavin biosynthesis protein RibD [Vibrio parahaemolyticus 16]
          Length = 368

 Score = 96.1 bits (239), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 37/159 (23%), Positives = 54/159 (33%), Gaps = 31/159 (19%)

Query: 2   KKGNVFMSCALEEAQNAALRNEI------P-VGAVAVLNNKIISRAGNRNRELKDVTAHA 54
           +     MS A+  A+       I      P VG V   N  I+    +          HA
Sbjct: 6   ETDFNMMSRAIWLAK-----GGIYTTAPNPNVGCVITQNGDIVGEGFHYRAGE----PHA 56

Query: 55  EILAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGG 108
           E+ A+RM               YVTLEPC        CA  +  A++ ++     +P   
Sbjct: 57  EVHALRMAGDKS-----VGATAYVTLEPCSHYGRTPPCAEGLIKAKVAKVICAMQDPNPQ 111

Query: 109 GIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
               G Q    A      E+  G+ EQ +  +   F K 
Sbjct: 112 VAGRGIQMLRDAG----IEVEVGLLEQDAIALNPSFIKR 146


>gi|221068442|ref|ZP_03544547.1| CMP/dCMP deaminase zinc-binding [Comamonas testosteroni KF-1]
 gi|220713465|gb|EED68833.1| CMP/dCMP deaminase zinc-binding [Comamonas testosteroni KF-1]
          Length = 170

 Score = 96.1 bits (239), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 35/142 (24%), Positives = 53/142 (37%), Gaps = 16/142 (11%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNK--IISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           +  A + AQ A      P GAV V  ++  ++    N      D   HAE    RM    
Sbjct: 22  LRRAQDVAQRATQMGHHPFGAVLVGPDQETVLMEQCN-----IDTVNHAESTLARMAATN 76

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPK----GGGIE-----NGTQF 116
            + E L    LY  +EPC MCA     A I R+ +G +  +     G        + +  
Sbjct: 77  YTAEFLWGCTLYTNVEPCCMCAGTAYWANIGRIVFGMTEHRLLECTGSHGENPTMSVSSR 136

Query: 117 YTLATCHHSPEIYPGISEQRSR 138
           Y    C  + E+   + E  + 
Sbjct: 137 YVFDHCQKAVELIGPVPEMEAE 158


>gi|300767117|ref|ZP_07077029.1| riboflavin biosynthesis protein RibD [Lactobacillus plantarum
           subsp. plantarum ATCC 14917]
 gi|300494936|gb|EFK30092.1| riboflavin biosynthesis protein RibD [Lactobacillus plantarum
           subsp. plantarum ATCC 14917]
          Length = 355

 Score = 96.1 bits (239), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 36/142 (25%), Positives = 63/142 (44%), Gaps = 20/142 (14%)

Query: 7   FMSCALEEAQNAALRN-EIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           FM  A+++A+ A +   + P VGAV V +  ++++  +          HAE+  +R    
Sbjct: 5   FMQMAIDQAKLAGVATYQNPQVGAVLVKDGHVLAQGYHHYFGGD----HAEVDVLRQ--- 57

Query: 65  ILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
            ++ E      L+VTLEPC        C+A I  A IR++  G  +P       G Q+  
Sbjct: 58  -VTPEQARGATLFVTLEPCSHYGKTPPCSARIVAAGIRQVVIGQLDPHPIVGGKGRQYL- 115

Query: 119 LATCHHSPEIYPGISEQRSRQI 140
               +H  ++  G    + R +
Sbjct: 116 ---LNHGVDVVTGCLTDKVRAL 134


>gi|256821696|ref|YP_003145659.1| riboflavin biosynthesis protein RibD [Kangiella koreensis DSM
           16069]
 gi|256795235|gb|ACV25891.1| riboflavin biosynthesis protein RibD [Kangiella koreensis DSM
           16069]
          Length = 372

 Score = 95.7 bits (238), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 37/153 (24%), Positives = 57/153 (37%), Gaps = 21/153 (13%)

Query: 3   KGNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           + + +M+ A++ A       R    VG V V +N II    +     K   AHAEI A+ 
Sbjct: 6   QDSSYMARAIQLAPRGWFTTRTNPRVGCVLVKDNIIIGEGWH----EKPGFAHAEINALN 61

Query: 61  MGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGT 114
                   E       YVTLEPC        CA A+  A + R+     +P       G 
Sbjct: 62  HAG-----ESAKGATAYVTLEPCAHHGKTGPCAEALVEAGVARVVAAMLDPNPLVAGKGM 116

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
           +    A      +   G+ + ++  +   F K 
Sbjct: 117 KILEKAG----IKTEYGLMQAQAETLNPGFIKR 145


>gi|296133286|ref|YP_003640533.1| riboflavin biosynthesis protein RibD [Thermincola sp. JR]
 gi|296031864|gb|ADG82632.1| riboflavin biosynthesis protein RibD [Thermincola potens JR]
          Length = 385

 Score = 95.7 bits (238), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 42/156 (26%), Positives = 66/156 (42%), Gaps = 25/156 (16%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56
           +K    +M  ALE A  A  R      P VGAV V + ++I +  +     K  T HAE+
Sbjct: 2   IKTDVKYMRMALELAAKA--RGNTSPNPMVGAVIVKDGRVIGKGYHM----KAGTPHAEV 55

Query: 57  LAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGI 110
            A+R    +          +YVTLEPC        C+ A+  A + R+     +P     
Sbjct: 56  HALREAGELS-----RGATMYVTLEPCSHYGRTPPCSKAVIAAGVARVVVAMEDPNPLVS 110

Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
             G Q    A      ++  G+ E+ +R++ + F K
Sbjct: 111 GQGIQQMREAG----IQVEVGLMEKEARELNEVFIK 142


>gi|148244868|ref|YP_001219562.1| bifunctional riboflavin biosynthesis protein RibD [Candidatus
           Vesicomyosocius okutanii HA]
 gi|146326695|dbj|BAF61838.1| bifunctional riboflavin biosynthesis protein RibD [Candidatus
           Vesicomyosocius okutanii HA]
          Length = 349

 Score = 95.7 bits (238), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 36/149 (24%), Positives = 60/149 (40%), Gaps = 23/149 (15%)

Query: 8   MSCALEEA---QNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           M+ A++ A   +     N + VG V V ++KII++  + +       AH EI A++    
Sbjct: 13  MTIAIKLALQGRYGVKSNPM-VGCVIVKHSKIIAKGYHESFGQ----AHGEINALQQ--- 64

Query: 65  ILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
                      LYVTLEPC        CA AI  + ++++     +P       G     
Sbjct: 65  --INYKAHGATLYVTLEPCSHQGKTPSCAQAIINSGVKKVIIAMLDPNPLVNGKGVVMLK 122

Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKE 147
            A      E+  G+ +  +  + Q F K 
Sbjct: 123 YAG----IEVKIGLLKNDASILNQGFIKR 147


>gi|331651348|ref|ZP_08352373.1| riboflavin biosynthesis protein RibD [Escherichia coli M718]
 gi|331051089|gb|EGI23141.1| riboflavin biosynthesis protein RibD [Escherichia coli M718]
          Length = 367

 Score = 95.7 bits (238), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 36/155 (23%), Positives = 58/155 (37%), Gaps = 21/155 (13%)

Query: 3   KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +   +M+ AL+ AQ      +  P VG V V + +I+    ++         HAE+ A+R
Sbjct: 2   QEEYYMARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGE----PHAEVHALR 57

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           M               YVTLEPC        C  A+  A + R+     +P       G 
Sbjct: 58  MAGEKA-----KGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVAAMQDPNPQVAGRGL 112

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
                A      ++  G+    + Q+ + F K  R
Sbjct: 113 YRLQQAG----IDVSHGLMMSEAEQLNKGFLKRMR 143


>gi|291287235|ref|YP_003504051.1| riboflavin biosynthesis protein RibD [Denitrovibrio acetiphilus DSM
           12809]
 gi|290884395|gb|ADD68095.1| riboflavin biosynthesis protein RibD [Denitrovibrio acetiphilus DSM
           12809]
          Length = 387

 Score = 95.7 bits (238), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 39/145 (26%), Positives = 57/145 (39%), Gaps = 21/145 (14%)

Query: 8   MSCALEEAQ--NAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M    + A       +    VGA+    ++I+SR  +          HAE+ AI      
Sbjct: 12  MQECAQLALLGKGYTKTNPVVGAIVANQSEILSRGWHMAYGG----PHAEVNAIDS---- 63

Query: 66  LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
                   +DLYVTLEPC        C   I  + IRR++ G  +P       G ++   
Sbjct: 64  -CPVSTEGLDLYVTLEPCSHSGKTPPCVEKIVKSGIRRVFIGVVDPNPLVAGKGVEYLK- 121

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDF 144
              +H  E+Y G  E     II+DF
Sbjct: 122 ---NHGVEVYVGYMEDLCASIIEDF 143


>gi|17227578|ref|NP_484126.1| riboflavin biosynthesis protein [Nostoc sp. PCC 7120]
 gi|17135060|dbj|BAB77606.1| riboflavin biosynthesis protein [Nostoc sp. PCC 7120]
          Length = 396

 Score = 95.7 bits (238), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 35/145 (24%), Positives = 55/145 (37%), Gaps = 21/145 (14%)

Query: 8   MSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M   LE A+ A  R    P VGAV V + +I+    +          HAE+ A+R    +
Sbjct: 42  MQRCLELARRALGRTSPNPLVGAVVVKDGEIVGEGFHPRAGE----PHAEVFALRAAGEL 97

Query: 66  LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
                     +YV LEPC        C+ A+  A + ++  G  +P       G      
Sbjct: 98  A-----RGATVYVNLEPCNHYGRTPPCSEALIAAGVAKVVVGMVDPNPLVGGGGIARLRG 152

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDF 144
           A      E+  G+     +Q+ + F
Sbjct: 153 AG----VEVLVGVEMAACQQLNEGF 173


>gi|172038173|ref|YP_001804674.1| riboflavin biosynthesis protein [Cyanothece sp. ATCC 51142]
 gi|171699627|gb|ACB52608.1| riboflavin biosynthesis protein [Cyanothece sp. ATCC 51142]
          Length = 364

 Score = 95.7 bits (238), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 35/149 (23%), Positives = 50/149 (33%), Gaps = 21/149 (14%)

Query: 4   GNVFMSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
               M   L  A+         P VGAV V   KII    +          HAE+ A+R 
Sbjct: 8   DQQMMQRCLTLARRGLGYTSPNPLVGAVIVKEGKIIGEGFHLKAGE----PHAEVFALRE 63

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
                         +YV LEPC        C  A+  A++ R+  G  +P       G  
Sbjct: 64  AGEKA-----VGGTVYVNLEPCNHYGRTPPCTEALISAKVARVVVGMVDPNPLVSGKGIA 118

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDF 144
               A      E+  G+ E    ++ + F
Sbjct: 119 RLQEAG----IEVTVGVEEAACLRLNEAF 143


>gi|307822590|ref|ZP_07652821.1| CMP/dCMP deaminase zinc-binding [Methylobacter tundripaludum SV96]
 gi|307736194|gb|EFO07040.1| CMP/dCMP deaminase zinc-binding [Methylobacter tundripaludum SV96]
          Length = 150

 Score = 95.7 bits (238), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 33/141 (23%), Positives = 54/141 (38%), Gaps = 13/141 (9%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           ++ A  EAQ       +PVGA     +  ++ R  NR  +  D + H E  A R   R  
Sbjct: 7   LAVAFAEAQAGFDEGGVPVGAALFDAHGNLLGRGRNRRVQDNDPSIHGETDAFRKAGR-- 64

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
            Q    +  L  TL PC  C+  I    I  +  G S    G +     +   A   H  
Sbjct: 65  -QTNYRDKILVTTLAPCWYCSGLIRQFNIGTVVVGESVNFEGHL----DWLKDAGV-HIV 118

Query: 127 EIYPGISEQRSRQIIQDFFKE 147
           E+    ++     +++ F ++
Sbjct: 119 EM----NDADCIALMRRFIEQ 135


>gi|70733030|ref|YP_262803.1| cytidine/deoxycytidylate deaminase family protein [Pseudomonas
           fluorescens Pf-5]
 gi|68347329|gb|AAY94935.1| cytidine/deoxycytidylate deaminase family protein [Pseudomonas
           fluorescens Pf-5]
          Length = 169

 Score = 95.7 bits (238), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 39/158 (24%), Positives = 62/158 (39%), Gaps = 19/158 (12%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRE-LKDVTAHAEILAIRM 61
               +  +++ A+ A  R   P  A+    + K+I+ AGN +     D T HAE+ A  +
Sbjct: 16  DLHLLRQSIQLAEEAKARGRHPFAALVADRDGKVIASAGNNSMPPEGDPTQHAELAAAAL 75

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS-------------NPKGG 108
             + LS + L    LY + EPC MCA AI    I R+ Y  S             NP   
Sbjct: 76  AAKRLSPQALAGCTLYTSAEPCCMCAGAIYWTGIGRVVYALSEHELLELTGDHPENPTF- 134

Query: 109 GIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
              +       A       ++  + E  +    + F+K
Sbjct: 135 ---SLPCREVFARGQRQIPVFGPMLESEAALAHKGFWK 169


>gi|78186602|ref|YP_374645.1| riboflavin biosynthesis protein RibD [Chlorobium luteolum DSM 273]
 gi|78166504|gb|ABB23602.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Chlorobium
           luteolum DSM 273]
          Length = 366

 Score = 95.4 bits (237), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 33/153 (21%), Positives = 56/153 (36%), Gaps = 23/153 (15%)

Query: 2   KKGNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57
           +     M+  +E A   A    +   P VG++ V +  +I    +     +    HAE+ 
Sbjct: 4   EADACHMARCIELALQGA--GSVSPNPMVGSLIVCDGSVIGEGYHM----QCGGPHAEVN 57

Query: 58  AIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIE 111
           AI     +    +L    LYV LEPC        C+  I    I R+  G  +P      
Sbjct: 58  AI---AAVSDPSLLSRSTLYVNLEPCSHFGRTPPCSDLIIEKMIPRVVVGCRDPNPKVAG 114

Query: 112 NGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
            G      +      ++Y G+ E    ++ + F
Sbjct: 115 RGIMRLRDSG----VDVYEGVLEAECLRLNEAF 143


>gi|262166346|ref|ZP_06034083.1| diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Vibrio mimicus VM223]
 gi|262026062|gb|EEY44730.1| diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Vibrio mimicus VM223]
          Length = 367

 Score = 95.4 bits (237), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 35/152 (23%), Positives = 53/152 (34%), Gaps = 21/152 (13%)

Query: 4   GNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
            +  MS A+E A       +  P VG V     +I+    +          HAE+ A+R 
Sbjct: 8   DHQMMSRAIELAWRGRFTTSPNPNVGCVITRGEQIVGEGFHFRAGE----PHAEVHAMRQ 63

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
              +           YVTLEPC        CA  +  A + ++     +P       G Q
Sbjct: 64  AGELT-----RGATAYVTLEPCSHYGRTPPCAEGLIKAGVAKVICAMQDPNPQVAGRGVQ 118

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
               A      E+  G+ E  +R +   F K 
Sbjct: 119 MLRDAG----IEVQIGLLEADARALNSGFLKR 146


>gi|238024083|ref|YP_002908315.1| putative deaminase [Burkholderia glumae BGR1]
 gi|55509025|gb|AAV52810.1| putative deaminase [Burkholderia glumae BGR1]
 gi|148562469|gb|ABQ88346.1| putative deaminase [Burkholderia glumae]
 gi|237878748|gb|ACR31080.1| Putative deaminase [Burkholderia glumae BGR1]
          Length = 384

 Score = 95.4 bits (237), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 36/150 (24%), Positives = 52/150 (34%), Gaps = 20/150 (13%)

Query: 4   GNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
              +M+ ALE A         P   VG V V +  +I     +     D   HAE+ A++
Sbjct: 20  DRAWMAKALELAARGLYTT-TPNPRVGCVIVKHGMLIGEGYTQP-AGHD---HAEVRAMK 74

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
                     L     YVTLEPC        CA  +  A I  +     +P       G 
Sbjct: 75  DA--RSRGHELRGATAYVTLEPCSHYGRTPPCAKGLVEAGIATVVAAMEDPNPQVSGRGY 132

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
                A      E+  G+ E  +R++   F
Sbjct: 133 AMLREAG----IEVRGGVLEDEARELNIGF 158


>gi|254226773|ref|ZP_04920347.1| riboflavin biosynthesis protein RibD [Vibrio cholerae V51]
 gi|125620711|gb|EAZ49071.1| riboflavin biosynthesis protein RibD [Vibrio cholerae V51]
          Length = 367

 Score = 95.4 bits (237), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 34/152 (22%), Positives = 54/152 (35%), Gaps = 21/152 (13%)

Query: 4   GNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
            +  MS A+E A       +  P VG V     +I+    +          HAE+ A+R 
Sbjct: 8   DHQMMSRAIELAWRGRFTTSPNPNVGCVITRGEQIVGEGFHFRAGE----PHAEVHAMRQ 63

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
              +           YVTLEPC        CA  +  A + ++     +P       G Q
Sbjct: 64  AGELT-----RGATAYVTLEPCSHYGRTPPCAEGLIKAGVAKVICAMQDPNPQVAGKGVQ 118

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
               A      E+  G+ +  +R + + F K 
Sbjct: 119 MLRDAG----IEVEVGLLDADARALNRGFLKR 146


>gi|330815405|ref|YP_004359110.1| Putative deaminase [Burkholderia gladioli BSR3]
 gi|327367798|gb|AEA59154.1| Putative deaminase [Burkholderia gladioli BSR3]
          Length = 384

 Score = 95.4 bits (237), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 38/150 (25%), Positives = 55/150 (36%), Gaps = 20/150 (13%)

Query: 4   GNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
              +M+ ALE A         P   VG V V +  +I     +     D   HAE+ A++
Sbjct: 20  DRAWMARALELAARGLYTT-TPNPRVGCVIVKHGILIGEGYTQP-AGHD---HAEVRAMK 74

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
              R    E L     YVTLEPC        CA  +  A I  +     +P       G 
Sbjct: 75  DA-RARGHE-LRGATAYVTLEPCSHYGRTPPCAKGLVEAGIATVVAAMEDPNPQVSGRGY 132

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
                A      E+  G+ E+ +R++   F
Sbjct: 133 AMLREAG----IEVRGGVLEEEARELNIGF 158


>gi|195640478|gb|ACG39707.1| riboflavin biosynthesis protein ribD [Zea mays]
          Length = 392

 Score = 95.4 bits (237), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 32/150 (21%), Positives = 58/150 (38%), Gaps = 21/150 (14%)

Query: 3   KGNVFMSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
               +M   +E A+ AA      P VG V V + +++    +     K    HAE+ A+R
Sbjct: 47  DDAHYMRRCVELARKAAGHTSPNPMVGCVIVRDGRVVGEGFH----PKAGQPHAEVFALR 102

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
               +           YV+LEPC        C  A+  A+++ +  G ++P       G 
Sbjct: 103 DAGNLAEN-----ATAYVSLEPCNHYGRTPPCTEALINAKVKEVVVGMTDPNPIVASKGI 157

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
           +    A       +  G+ E   R++ + +
Sbjct: 158 EKLQGAG----ISVRVGVEEALCRKLNEAY 183


>gi|212275115|ref|NP_001130669.1| hypothetical protein LOC100191772 [Zea mays]
 gi|194689788|gb|ACF78978.1| unknown [Zea mays]
          Length = 392

 Score = 95.4 bits (237), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 32/150 (21%), Positives = 58/150 (38%), Gaps = 21/150 (14%)

Query: 3   KGNVFMSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
               +M   +E A+ AA      P VG V V + +++    +     K    HAE+ A+R
Sbjct: 47  DDAHYMRRCVELARKAAGHTSPNPMVGCVIVRDGRVVGEGFH----PKAGQPHAEVFALR 102

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
               +           YV+LEPC        C  A+  A+++ +  G ++P       G 
Sbjct: 103 DAGNLAEN-----ATAYVSLEPCNHYGRTPPCTEALINAKVKEVVVGMTDPNPIVASKGI 157

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
           +    A       +  G+ E   R++ + +
Sbjct: 158 EKLQGAG----ISVRVGVEEALCRKLNEAY 183


>gi|186473011|ref|YP_001860353.1| CMP/dCMP deaminase zinc-binding [Burkholderia phymatum STM815]
 gi|184195343|gb|ACC73307.1| CMP/dCMP deaminase zinc-binding [Burkholderia phymatum STM815]
          Length = 180

 Score = 95.4 bits (237), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 37/146 (25%), Positives = 59/146 (40%), Gaps = 17/146 (11%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNK--IISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           +  A   A+ A L    P GA+ V  ++  ++   GN      D   HAE +  RM    
Sbjct: 30  LRHASIVAERATLMGHHPFGAILVGPDQESVLIEQGNV-----DTVNHAESVLARMAALN 84

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPK-GGGIENGTQ--------F 116
            + + L    LY T+EPC MCA     A I R+ +G +  +      N T          
Sbjct: 85  FTPQYLWSCTLYTTVEPCCMCAGTAYWANIGRVVFGMTEERLLQATGNHTDNPTMSVPSR 144

Query: 117 YTLATCHHSPEIYPGISEQRSRQIIQ 142
           Y    C    ++   ++E  + +I+Q
Sbjct: 145 YVFDHCQKQVDLIGPVTEVEA-EIMQ 169


>gi|215485495|ref|YP_002327926.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Escherichia coli O127:H6 str. E2348/69]
 gi|312964564|ref|ZP_07778820.1| riboflavin biosynthesis protein RibD [Escherichia coli 2362-75]
 gi|215263567|emb|CAS07897.1| fused diaminohydroxyphosphoribosylaminopyrimidine deaminase and
           5-amino-6-(5-phosphoribosylamino) uracil reductase
           [Escherichia coli O127:H6 str. E2348/69]
 gi|312290798|gb|EFR18675.1| riboflavin biosynthesis protein RibD [Escherichia coli 2362-75]
          Length = 367

 Score = 95.4 bits (237), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 36/155 (23%), Positives = 57/155 (36%), Gaps = 21/155 (13%)

Query: 3   KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +   +M+ AL+ AQ      +  P VG V V + +I+    ++         HAE+ A+R
Sbjct: 2   QDEYYMARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGE----PHAEVHALR 57

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           M               YVTLEPC        C  A+  A + R+     +P       G 
Sbjct: 58  MAGEKA-----KGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVAAMQDPNPQVAGRGL 112

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
                A      ++  G+    + Q+   F K  R
Sbjct: 113 YRLQQAG----IDVSHGLMMSEAEQLNNGFLKRMR 143


>gi|317509323|ref|ZP_07966943.1| cytidine and deoxycytidylate deaminase zinc-binding protein
           [Segniliparus rugosus ATCC BAA-974]
 gi|316252379|gb|EFV11829.1| cytidine and deoxycytidylate deaminase zinc-binding protein
           [Segniliparus rugosus ATCC BAA-974]
          Length = 148

 Score = 95.4 bits (237), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 29/139 (20%), Positives = 52/139 (37%), Gaps = 15/139 (10%)

Query: 11  ALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQE 69
           A+ EA+       +P+GA     + K++ R  NR  +  D   HAE  A R   R   Q 
Sbjct: 10  AVAEARAGLAEGGVPIGAALFTRDGKLLGRGHNRRVQWDDPAIHAETDAFRAAGR---QR 66

Query: 70  ILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIY 129
              +  +  TL PC  C+  +    I  +  G ++   GG +   +           E+ 
Sbjct: 67  DYRDTVMVTTLSPCWYCSGLVRQFNIGAVIIGEASNFHGGHDWLAEL--------GVEVA 118

Query: 130 PGISEQ-RSRQIIQDFFKE 147
             + +      ++  F + 
Sbjct: 119 --VLDDPDCTAMLGSFIEA 135


>gi|192291382|ref|YP_001991987.1| riboflavin biosynthesis protein RibD [Rhodopseudomonas palustris
           TIE-1]
 gi|192285131|gb|ACF01512.1| riboflavin biosynthesis protein RibD [Rhodopseudomonas palustris
           TIE-1]
          Length = 389

 Score = 95.4 bits (237), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 35/144 (24%), Positives = 48/144 (33%), Gaps = 21/144 (14%)

Query: 4   GNVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
              FM  AL   +    R      VGAV V +  I+ R             HAE+ A+R 
Sbjct: 27  DRRFMQLALALGRRGQGRTAPNPAVGAVLVKDGVIVGRGW----TQDGGRPHAEVEALRR 82

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
                         LYVTLEPC        CA A+  A I R+     +P       G  
Sbjct: 83  AGDAA-----RGATLYVTLEPCSHHGRTPPCADAVIAAGIARVVSAIEDPNPLVAGQGHA 137

Query: 116 FYTLATCHHSPEIYPGISEQRSRQ 139
               A       +  G+  + + +
Sbjct: 138 RLRAAG----IAVEIGVCAEEAAR 157


>gi|253699856|ref|YP_003021045.1| riboflavin biosynthesis protein RibD [Geobacter sp. M21]
 gi|251774706|gb|ACT17287.1| riboflavin biosynthesis protein RibD [Geobacter sp. M21]
          Length = 369

 Score = 95.4 bits (237), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 40/155 (25%), Positives = 61/155 (39%), Gaps = 22/155 (14%)

Query: 1   MKK-GNVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57
           M       M  AL EA+    +      VG V V + +++    +     K  T HAE+ 
Sbjct: 1   MSDLHLKMMRLALCEARKGVGKTAPNPAVGCVIVRDGEVVGTGWH----KKAGTPHAEVH 56

Query: 58  AIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIE 111
           A+       + E     D YVTLEPC        CA A+  A++ R++    +P      
Sbjct: 57  AL-----KAAGEKAAGADAYVTLEPCSHFGKTPPCAKALIEAKVARVFVAMVDPNPLVSG 111

Query: 112 NGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
            G Q    A       +  G+ E+ SR++   F K
Sbjct: 112 KGIQMLKDAG----IAVEVGLLEEESRELNLPFIK 142


>gi|329943233|ref|ZP_08292007.1| riboflavin biosynthesis protein RibD [Chlamydophila psittaci Cal10]
 gi|332287812|ref|YP_004422713.1| riboflavin biosynthesis protein [Chlamydophila psittaci 6BC]
 gi|313848384|emb|CBY17388.1| riboflavin biosynthesis protein RibD [Chlamydophila psittaci RD1]
 gi|325507267|gb|ADZ18905.1| riboflavin biosynthesis protein [Chlamydophila psittaci 6BC]
 gi|328814780|gb|EGF84770.1| riboflavin biosynthesis protein RibD [Chlamydophila psittaci Cal10]
 gi|328915072|gb|AEB55905.1| riboflavin biosynthesis protein RibD [Chlamydophila psittaci 6BC]
          Length = 368

 Score = 95.4 bits (237), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 35/155 (22%), Positives = 60/155 (38%), Gaps = 21/155 (13%)

Query: 2   KKGNVFMSCALEEAQN-AALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
           ++   FM  A+E  +  A      P VG V V N +II    +   +      HAE  AI
Sbjct: 6   EQQLFFMRRAIELGEKGAFSSQPNPWVGCVIVKNGRIIGEGYH--EKAGQP--HAEEKAI 61

Query: 60  RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113
           R        E +   ++YVTLEPC        C   +   ++  +Y    +P       G
Sbjct: 62  RSA-----SESIEGSEVYVTLEPCCHYGNTPPCVNLLIKYKVAAVYVALLDPDSRVSGRG 116

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKER 148
                 A       +Y G+ ++ + + ++ +  +R
Sbjct: 117 IASLRKAG----ICVYEGLGKEEAERSLKSYLYQR 147


>gi|91784309|ref|YP_559515.1| putative cytidine/deoxycytidylate deaminase family protein
           [Burkholderia xenovorans LB400]
 gi|91688263|gb|ABE31463.1| Putative cytidine/deoxycytidylate deaminase family protein
           [Burkholderia xenovorans LB400]
          Length = 180

 Score = 95.4 bits (237), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 33/137 (24%), Positives = 53/137 (38%), Gaps = 16/137 (11%)

Query: 13  EEAQNAALRNEIPVGAVAVLNNK--IISRAGNRNRELKDVTAHAEILAIRMGCRILSQEI 70
             A+ A L    P GAV V  ++  ++   GN      D   HAE +  R+     +   
Sbjct: 37  RVAERATLLGHHPFGAVLVGPDQETVLMEQGNV-----DTVNHAESVLARVAALNFTPAY 91

Query: 71  LPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPK----GGG-----IENGTQFYTLAT 121
           L    LY ++EPC MCA  +  A I R+ +G +  +     G        +    Y    
Sbjct: 92  LWSCTLYTSVEPCCMCAGTMYWANIGRVVFGMTEKRLLEATGAHAENPTMSVDCRYVFDH 151

Query: 122 CHHSPEIYPGISEQRSR 138
           C    E+   ++E  + 
Sbjct: 152 CQKPVEVIGPVAEVEAE 168


>gi|284052639|ref|ZP_06382849.1| CMP/dCMP deaminase zinc-binding protein [Arthrospira platensis str.
           Paraca]
          Length = 75

 Score = 95.4 bits (237), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 30/72 (41%), Positives = 36/72 (50%)

Query: 78  VTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRS 137
           VTLEPC MCA AI  ARI  L YG  +PK G I            +H   +  GI E   
Sbjct: 1   VTLEPCPMCAGAILQARIGLLVYGVDDPKTGSIRTVCNLPDSPASYHRLPVLGGILESSC 60

Query: 138 RQIIQDFFKERR 149
           RQ +Q +F + R
Sbjct: 61  RQQLQSWFAQHR 72


>gi|258592177|emb|CBE68486.1| bifunctional: diaminohydroxyphosphoribosylaminopyrimidine deaminase
           (N-terminal); 5-amino-6-(5-phosphoribosylamino) uracil
           reductase [NC10 bacterium 'Dutch sediment']
          Length = 372

 Score = 95.4 bits (237), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 39/152 (25%), Positives = 54/152 (35%), Gaps = 21/152 (13%)

Query: 3   KGNVFMSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
               FM  AL  A+    R    P VGAV V + +I+    +          HAE++A+ 
Sbjct: 5   DDERFMRHALVLAEKGRGRTSPNPMVGAVVVQHGRIVGEGYHAQAGK----PHAEVVALE 60

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
                         DLYVTLEPC        C   I  A IRR+     +P       G 
Sbjct: 61  YAGGAARN-----ADLYVTLEPCGHYGRTPPCTDRIIQAGIRRVVVPTIDPNPLVSGRGV 115

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
           Q    A       +  G+    +  + + F K
Sbjct: 116 QSLRDAG----VIVDLGLRSADATALNEAFIK 143


>gi|163788599|ref|ZP_02183044.1| riboflavin biosynthesis protein RibD [Flavobacteriales bacterium
           ALC-1]
 gi|159875836|gb|EDP69895.1| riboflavin biosynthesis protein RibD [Flavobacteriales bacterium
           ALC-1]
          Length = 323

 Score = 95.4 bits (237), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 34/126 (26%), Positives = 49/126 (38%), Gaps = 17/126 (13%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC-- 83
           VGAV V + KIIS              HAE+ AI     I  + +L +  LYVTLEPC  
Sbjct: 17  VGAVIVHDKKIISEGFTSTYGGN----HAEVNAINS---IKDKSLLEKSTLYVTLEPCSH 69

Query: 84  ----TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139
                 C+  I   +I  +  G  +        G      + C    ++  G+ E   + 
Sbjct: 70  HGKTPPCSDLILKHKIPEVIIGCVDDNPEVAGKGIAKLKASGC----KVTVGVLEAECKT 125

Query: 140 IIQDFF 145
             + FF
Sbjct: 126 HHKRFF 131


>gi|332672108|ref|YP_004455116.1| CMP/dCMP deaminase zinc-binding protein [Cellulomonas fimi ATCC
           484]
 gi|332341146|gb|AEE47729.1| CMP/dCMP deaminase zinc-binding protein [Cellulomonas fimi ATCC
           484]
          Length = 161

 Score = 95.4 bits (237), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 30/113 (26%), Positives = 43/113 (38%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
               +   LE A+ A    + P G+V V     +  A     +  D T H E+   R   
Sbjct: 7   DLAHLRRCLELAREALDDGDEPFGSVLVDAGGTVLLADRNRVKDGDGTRHPELEIARWAA 66

Query: 64  RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116
             L  E      +Y + E C MCAAA   A + R+ Y AS+ +      G   
Sbjct: 67  AHLPVEERAGCTVYTSGEHCPMCAAAHGWAGLGRIVYVASSGQLAAWRRGWGL 119


>gi|258620986|ref|ZP_05716020.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Vibrio
           mimicus VM573]
 gi|258586374|gb|EEW11089.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Vibrio
           mimicus VM573]
          Length = 367

 Score = 95.4 bits (237), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 35/152 (23%), Positives = 53/152 (34%), Gaps = 21/152 (13%)

Query: 4   GNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
            +  MS A+E A       +  P VG V     +I+    +          HAE+ A+R 
Sbjct: 8   DHQMMSRAIELAWRGRFTTSPNPNVGCVITRGEQIVGEGFHFRAGE----PHAEVHAMRQ 63

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
              +           YVTLEPC        CA  +  A + ++     +P       G Q
Sbjct: 64  AGELT-----RGATAYVTLEPCSHYGRTPPCAEGLIKAGVAKVICAMQDPNPQVAGRGVQ 118

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
               A      E+  G+ E  +R +   F K 
Sbjct: 119 MLRDAG----IEVQIGLLEADARALNSGFLKR 146


>gi|189219671|ref|YP_001940312.1| Pyrimidine deaminase and pyrimidine reductase [Methylacidiphilum
           infernorum V4]
 gi|189186529|gb|ACD83714.1| Pyrimidine deaminase and pyrimidine reductase [Methylacidiphilum
           infernorum V4]
          Length = 376

 Score = 95.4 bits (237), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 37/151 (24%), Positives = 54/151 (35%), Gaps = 19/151 (12%)

Query: 3   KGNVFMSCALEEAQ--NAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +   +M  AL+ A            VGAV V    +I R  +R        AHAEI AI 
Sbjct: 25  EDRYWMKEALKWALLGEGLTSPNPAVGAVLVKEGTLIGRGYHRKAGQ----AHAEIEAIE 80

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
              +    E +    LYVTLEPC        C   I   +I R+   + +P         
Sbjct: 81  DAKKR--GESVAGSTLYVTLEPCSSWGKTPPCTERIVKEKISRVVASSPDPNPRNKPRAV 138

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
           +         S EI      + +  + + F+
Sbjct: 139 ELLPSLGVDFSWEIL-----EEALFLNRGFY 164


>gi|117923484|ref|YP_864101.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Magnetococcus sp. MC-1]
 gi|117607240|gb|ABK42695.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Magnetococcus sp. MC-1]
          Length = 376

 Score = 95.4 bits (237), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 38/148 (25%), Positives = 51/148 (34%), Gaps = 24/148 (16%)

Query: 3   KGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
           K   +M  AL  A     R   P   VG V V  ++II R  +R         HAE+ A+
Sbjct: 8   KDRAYMDHALRLAARGLGRT-RPNPTVGCVIVKEDRIIGRGWHRKAGG----PHAEVEAL 62

Query: 60  RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113
           RM               YVTLEPC        C   +  A IRR+     +P       G
Sbjct: 63  RMAGEAA-----RGATAYVTLEPCSHHGRTPPCCEGLIKAGIRRVVAAMEDPNPLVSGQG 117

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQII 141
            Q    A              + + Q++
Sbjct: 118 FQRLKQAGVVVQVG-----VREEAAQML 140


>gi|218668008|ref|YP_002424804.1| riboflavin biosynthesis protein RibD [Acidithiobacillus
           ferrooxidans ATCC 23270]
 gi|218520221|gb|ACK80807.1| riboflavin biosynthesis protein RibD [Acidithiobacillus
           ferrooxidans ATCC 23270]
          Length = 366

 Score = 95.4 bits (237), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 39/156 (25%), Positives = 57/156 (36%), Gaps = 21/156 (13%)

Query: 2   KKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
           ++   FMS AL  A+      +  P VGAV V + ++I R  +          HAE+LA+
Sbjct: 4   EQDLAFMSEALVLAEQGLYSAHPNPCVGAVLVKDGRVIGRGAHLQAGE----PHAEVLAL 59

Query: 60  RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113
           +                YVTLEPC        CA A+  A I R+     +P       G
Sbjct: 60  KEAGAAARGAT-----AYVTLEPCSHYGRTPPCADALIAAGIARVVIAMRDPNPLVAGRG 114

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
            +    A          G  E  +  +   F +  R
Sbjct: 115 VERLRAAG----VVAEEGCLEAAAEALNPGFLRRMR 146


>gi|91792826|ref|YP_562477.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Shewanella
           denitrificans OS217]
 gi|91714828|gb|ABE54754.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Shewanella
           denitrificans OS217]
          Length = 142

 Score = 95.0 bits (236), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 33/146 (22%), Positives = 55/146 (37%), Gaps = 21/146 (14%)

Query: 5   NVFMSCALEEAQNAALR--NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
             +M  ALE ++ A        PVG V V + +++ +   +         HAE+ A+   
Sbjct: 3   EEYMLIALELSKKALPHCLPNPPVGCVLVKDGQVVGQGFTQVIGGN----HAEVEALNS- 57

Query: 63  CRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116
                   L  V  YVTLEPC        CAA ++ + ++ L     +P       G   
Sbjct: 58  ----YTGDLAGVTAYVTLEPCSFVGRTPACAARLAHSGLKHLVLAMLDPDSRNNGKGLAM 113

Query: 117 YTLATCHHSPEIYPGISEQRSRQIIQ 142
              A  +    +  GI E ++   + 
Sbjct: 114 LQHAGIN----VELGICEAQASAFLS 135


>gi|70726154|ref|YP_253068.1| riboflavin specific deaminase [Staphylococcus haemolyticus
           JCSC1435]
 gi|68446878|dbj|BAE04462.1| riboflavin specific deaminase [Staphylococcus haemolyticus
           JCSC1435]
          Length = 347

 Score = 95.0 bits (236), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 33/150 (22%), Positives = 57/150 (38%), Gaps = 24/150 (16%)

Query: 7   FMSCALEEAQNAALRNEI--PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           FM  A++ AQ    +  I  PVGAV V N +I+    +  +  K    HAE+ A+ M  +
Sbjct: 4   FMEYAIQLAQMVKGQTGINPPVGAVVVNNGRIVGLGAHLKQGEK----HAEVQALDMAGK 59

Query: 65  ILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
                      +Y++LEPC        C   I    + ++ Y   +       +      
Sbjct: 60  EA-----KGGIIYISLEPCTHFGSTPPCVNKIIEFGLSKVIYAVKDTTLPSEGDA--ILE 112

Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKER 148
            A      +       + +  + +DFFK +
Sbjct: 113 QAGIDVEYQ-----YSEEAAALYKDFFKAK 137


>gi|298490230|ref|YP_003720407.1| riboflavin biosynthesis protein RibD ['Nostoc azollae' 0708]
 gi|298232148|gb|ADI63284.1| riboflavin biosynthesis protein RibD ['Nostoc azollae' 0708]
          Length = 375

 Score = 95.0 bits (236), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 36/149 (24%), Positives = 57/149 (38%), Gaps = 21/149 (14%)

Query: 4   GNVFMSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
            ++ M   L+ A+ A  R    P VGAV V + +I+    +          HAE+ A+R 
Sbjct: 17  DSLMMQWCLQLARRALGRTSPNPLVGAVVVQDREIVGEGFHPRAGE----PHAEVFALRA 72

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
                         +YV+LEPC        C+  +  A I ++  G  +P       G  
Sbjct: 73  AGEKAH-----GATIYVSLEPCNHYGRTPPCSEGLIAAGISKVVVGMVDPNPLVAGGGIA 127

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDF 144
               A      E+  G+ E   RQ+ + F
Sbjct: 128 RLRAAG----IEVLVGVEEAACRQLNEGF 152


>gi|254421232|ref|ZP_05034950.1| riboflavin biosynthesis protein RibD [Synechococcus sp. PCC 7335]
 gi|196188721|gb|EDX83685.1| riboflavin biosynthesis protein RibD [Synechococcus sp. PCC 7335]
          Length = 363

 Score = 95.0 bits (236), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 38/151 (25%), Positives = 55/151 (36%), Gaps = 24/151 (15%)

Query: 3   KGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
                M    E A  AA     P   VG++ + + +I+    +          HAEI A+
Sbjct: 10  SDTDLMRRCCELAAQAAGHT-APNPLVGSIILRDGEIVGEGFHPKAGE----PHAEIFAL 64

Query: 60  RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113
           R        +      LYV LEPC        C+ A+  A IRR+  G  +P       G
Sbjct: 65  RAA-----SDRAQGATLYVNLEPCNHKGLTPPCSEAVIKAGIRRVVIGMRDPNPKAKG-G 118

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
            +    A      E+  GI   R  Q+ + F
Sbjct: 119 IEKLRQAG----IEVVVGIEVDRCHQLNEAF 145


>gi|212634188|ref|YP_002310713.1| riboflavin biosynthesis protein RibD [Shewanella piezotolerans WP3]
 gi|212555672|gb|ACJ28126.1| Riboflavin biosynthesis protein RibD [Shewanella piezotolerans WP3]
          Length = 373

 Score = 95.0 bits (236), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 37/154 (24%), Positives = 57/154 (37%), Gaps = 21/154 (13%)

Query: 2   KKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
            + N  MS A+E AQ         P VG+V V ++ I+    +          HAE+ A+
Sbjct: 4   TEDNQMMSLAIELAQKGLYTTRPNPCVGSVIVKDSVIVGEGYHIRAGG----PHAEVYAL 59

Query: 60  RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113
            M               YVTLEPC        CA A+  A + R+    ++P       G
Sbjct: 60  NMAGN-----DAKGATAYVTLEPCSHYGRTPPCAKALIEAGVSRVVVAVTDPNPQVSGRG 114

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
                 A      ++  G+    ++Q+   F K 
Sbjct: 115 IAMLQDAG----IQVDVGLLTDAAKQVNLGFLKR 144


>gi|91784896|ref|YP_560102.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase /
           diaminohydroxyphosphoribosylaminopyrimidine deaminase
           [Burkholderia xenovorans LB400]
 gi|91688850|gb|ABE32050.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase /
           diaminohydroxyphosphoribosylaminopyrimidine deaminase
           [Burkholderia xenovorans LB400]
          Length = 389

 Score = 95.0 bits (236), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 34/151 (22%), Positives = 51/151 (33%), Gaps = 18/151 (11%)

Query: 2   KKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
           +   V M  AL  A+      +  P VG V V N  +I     +         HAEI A+
Sbjct: 4   QTDFVHMERALALARRGMYTTDPNPRVGCVLVKNGAVIGEGFTQPAGQD----HAEIRAL 59

Query: 60  RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113
           +          L     YVTLEPC        C  A+  A++  +     +P       G
Sbjct: 60  KDA--RSRGHDLRGATAYVTLEPCSHFGRTPPCVNALIEAQVALVVAAMEDPNPLVSGRG 117

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
                 A      E+  G+    + ++   F
Sbjct: 118 LAILRDAG----IEVRCGLLANEAHELNIGF 144


>gi|39935793|ref|NP_948069.1| riboflavin biosynthesis protein RibD [Rhodopseudomonas palustris
           CGA009]
 gi|39649646|emb|CAE28168.1| putative riboflavin-specific deaminase / reductase
           [Rhodopseudomonas palustris CGA009]
          Length = 389

 Score = 95.0 bits (236), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 35/144 (24%), Positives = 48/144 (33%), Gaps = 21/144 (14%)

Query: 4   GNVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
              FM  AL   +    R      VGAV V +  I+ R             HAE+ A+R 
Sbjct: 27  DRRFMQLALALGRRGQGRTAPNPAVGAVLVKDGVIVGRGW----TQDGGRPHAEVEALRR 82

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
                         LYVTLEPC        CA A+  A I R+     +P       G  
Sbjct: 83  AGDAA-----RGATLYVTLEPCSHHGRTPPCADAVIAAGIARVVSAIEDPNPLVAGQGHA 137

Query: 116 FYTLATCHHSPEIYPGISEQRSRQ 139
               A       +  G+  + + +
Sbjct: 138 RLRTAG----IAVEIGVCAEEAAR 157


>gi|291613122|ref|YP_003523279.1| riboflavin biosynthesis protein RibD [Sideroxydans lithotrophicus
           ES-1]
 gi|291583234|gb|ADE10892.1| riboflavin biosynthesis protein RibD [Sideroxydans lithotrophicus
           ES-1]
          Length = 363

 Score = 95.0 bits (236), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 33/149 (22%), Positives = 54/149 (36%), Gaps = 21/149 (14%)

Query: 4   GNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
            + +M+ AL  A+           VG V V  ++++    +          HAE+ A+R 
Sbjct: 5   DSQWMALALRLAEQGLYTTSPNPRVGCVLVKQHEVVGTGWHERAGE----PHAEVHALRA 60

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
             +            YVTLEPC        CA A+  A I+R+     +P       G  
Sbjct: 61  AGKSA-----KGATAYVTLEPCSHHGRTPPCADALVAAGIKRVVAAMQDPNPQVAGQGIA 115

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDF 144
               A       +  G+ E  +R++   F
Sbjct: 116 RLRAAGIG----VECGLMEVAARELNIGF 140


>gi|194212402|ref|XP_001914792.1| PREDICTED: similar to hCG22695 [Equus caballus]
          Length = 371

 Score = 95.0 bits (236), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 33/159 (20%), Positives = 58/159 (36%), Gaps = 46/159 (28%)

Query: 26  VGAVAVLN--NKIISRAGNRNRELKDVTAHAEILAIR--MGCRILSQEILP--------- 72
           VGAV V    +++ +   +  R       HA ++ I      +      L          
Sbjct: 211 VGAVVVDPASDRVAATGHDCRRPAT-PLLHATMVCIDLVAQGQGRGTYDLRPHPACSFAP 269

Query: 73  -------------------------------EVDLYVTLEPCTMCAAAISLARIRRLYYG 101
                                            DLYVT EPC MCA A+  +R++R++YG
Sbjct: 270 AASAQAVRVGSVRKLDEDVDTDEDGLPYVCTGYDLYVTREPCAMCAMALVHSRVQRVFYG 329

Query: 102 ASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140
           A +P  G +    + +     +H  +++ G+ E   R++
Sbjct: 330 APSPD-GALGTRLRLHARPDLNHRFQVFRGVLEAACRRL 367


>gi|315186245|gb|EFU20006.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase
           ;5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Spirochaeta thermophila DSM 6578]
          Length = 362

 Score = 95.0 bits (236), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 30/128 (23%), Positives = 48/128 (37%), Gaps = 19/128 (14%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC-- 83
           VGAV V + +++    +    L     HAE+ A+               ++YVTLEPC  
Sbjct: 29  VGAVVVKDGRVVGEGFHERAGL----PHAEVTALSEAGGEA-----RGAEMYVTLEPCCH 79

Query: 84  ----TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139
                 C  AI  A +RR+     +P       G      A      E+  G+  + +R 
Sbjct: 80  WGRTPPCTDAILKAGVRRVVVACRDPNPQVAGKGLSILAEAG----VEVEVGVLSREARW 135

Query: 140 IIQDFFKE 147
           + + F   
Sbjct: 136 LNRGFISR 143


>gi|256004715|ref|ZP_05429691.1| riboflavin biosynthesis protein RibD [Clostridium thermocellum DSM
           2360]
 gi|281416820|ref|ZP_06247840.1| riboflavin biosynthesis protein RibD [Clostridium thermocellum
           JW20]
 gi|255991308|gb|EEU01414.1| riboflavin biosynthesis protein RibD [Clostridium thermocellum DSM
           2360]
 gi|281408222|gb|EFB38480.1| riboflavin biosynthesis protein RibD [Clostridium thermocellum
           JW20]
 gi|316941134|gb|ADU75168.1| riboflavin biosynthesis protein RibD [Clostridium thermocellum DSM
           1313]
          Length = 368

 Score = 95.0 bits (236), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 35/130 (26%), Positives = 53/130 (40%), Gaps = 17/130 (13%)

Query: 1   MKKGNVFMSCALEEAQNAA-LRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           + +   FMS A++ A+      N  P VGAV V + KII+   ++  +L     HAE+ A
Sbjct: 4   LSEKEFFMSRAIKLAKLGWGKTNPNPLVGAVVVKDGKIIAEGYHK--QLGGP--HAEVEA 59

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
                    +E +    LYV LEPC        CA  I    I+++     +P       
Sbjct: 60  FNNA-----KEDVAGGTLYVNLEPCSHYGRTPPCAQKIIDVGIKKVVAAIKDPNPKVSGR 114

Query: 113 GTQFYTLATC 122
           G +    A  
Sbjct: 115 GFEMLKNAGI 124


>gi|30248797|ref|NP_840867.1| riboflavin biosynthesis bifunctional RibD [Nitrosomonas europaea
           ATCC 19718]
 gi|30180392|emb|CAD84704.1| Riboflavin biosynthesis bifunctional RibD [Nitrosomonas europaea
           ATCC 19718]
          Length = 363

 Score = 95.0 bits (236), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 33/154 (21%), Positives = 54/154 (35%), Gaps = 21/154 (13%)

Query: 4   GNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
              +MS AL  A+           VG V V   K++    +          HAEI A+R 
Sbjct: 6   DYEYMSHALRLAERGLFTTSPNPRVGCVIVNGGKVVGTGWHERAGE----PHAEIHALRK 61

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
              +          +YVTLEPC        C  A+  A + ++    ++P       G +
Sbjct: 62  AGDLA-----KGATVYVTLEPCSHHGRTPPCVEALIQAGVCKVVMAMNDPNPHVNGQGKE 116

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
           +   A       I  G+   ++ ++   F    R
Sbjct: 117 WLQKAG----IAIQAGLLADQAERLNIGFVTRMR 146


>gi|197335179|ref|YP_002155463.1| riboflavin biosynthesis protein RibD [Vibrio fischeri MJ11]
 gi|197316669|gb|ACH66116.1| riboflavin biosynthesis protein RibD [Vibrio fischeri MJ11]
          Length = 363

 Score = 95.0 bits (236), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 33/145 (22%), Positives = 50/145 (34%), Gaps = 21/145 (14%)

Query: 8   MSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M  A+  A+         P VG V V + KI+    +          HAE+ A+R   + 
Sbjct: 2   MQKAILLAKQGIYTTAPNPNVGCVLVKDGKIVGEGAHLKAGE----PHAEVHALRQAGKE 57

Query: 66  LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
                      YVTLEPC        CA  +  A ++++     +P       G      
Sbjct: 58  AQ-----GATAYVTLEPCSHYGRTPPCAEGLIKAGVKKVICAMVDPNPQVAGRGLAMLNE 112

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDF 144
           A      E   G+ E  +R +   F
Sbjct: 113 AG----IETASGLLEADARALNPHF 133


>gi|88704437|ref|ZP_01102151.1| Riboflavin biosynthesis protein ribD [Congregibacter litoralis
           KT71]
 gi|88701488|gb|EAQ98593.1| Riboflavin biosynthesis protein ribD [Congregibacter litoralis
           KT71]
          Length = 377

 Score = 95.0 bits (236), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 32/154 (20%), Positives = 54/154 (35%), Gaps = 21/154 (13%)

Query: 4   GNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
              FM+ AL  A+      R    VG V V ++ ++     +         HAEI+A++ 
Sbjct: 14  DRQFMARALRLAERGKYWARPNPHVGCVLVRDSTVVGEGFTQPAGGD----HAEIMALKA 69

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
                          YVTLEPC        C  A+  A + R++ G  +P       G  
Sbjct: 70  AGDAA-----RGSTAYVTLEPCAHTGRTPPCCNALIAAGVARVFVGLRDPNPKVDGGGIH 124

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
                       ++ G+   +    +  F + +R
Sbjct: 125 RLQAEGL----AVHQGLMADQVEAQLAGFLQRQR 154


>gi|261417115|ref|YP_003250798.1| riboflavin biosynthesis protein RibD [Fibrobacter succinogenes
           subsp. succinogenes S85]
 gi|261373571|gb|ACX76316.1| riboflavin biosynthesis protein RibD [Fibrobacter succinogenes
           subsp. succinogenes S85]
 gi|302326859|gb|ADL26060.1| riboflavin biosynthesis protein RibD [Fibrobacter succinogenes
           subsp. succinogenes S85]
          Length = 421

 Score = 95.0 bits (236), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 36/136 (26%), Positives = 58/136 (42%), Gaps = 21/136 (15%)

Query: 7   FMSCALEEA--QNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           FM  ALE+A       R    VGAV V +  ++ +     R  +  +AHAE++A+R    
Sbjct: 8   FMQFALEQAFFAIGESRPNPAVGAVVVKDGIVVGKG----RTQRPGSAHAEVMALRDAGE 63

Query: 65  ILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
           +          ++VTLEPC        C  AI  A I+++Y+  S+P         +   
Sbjct: 64  LA-----RGASIFVTLEPCCHYGRTPPCTKAIIEAGIQKVYFAHSDPNPVVHGKSRKILE 118

Query: 119 LATCHHSPEIYPGISE 134
            A      E++ G+  
Sbjct: 119 EAG----VEVHEGVDA 130


>gi|239621600|ref|ZP_04664631.1| riboflavin biosynthesis protein RibD [Bifidobacterium longum subsp.
           infantis CCUG 52486]
 gi|239515475|gb|EEQ55342.1| riboflavin biosynthesis protein RibD [Bifidobacterium longum subsp.
           infantis CCUG 52486]
          Length = 320

 Score = 95.0 bits (236), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 34/153 (22%), Positives = 54/153 (35%), Gaps = 18/153 (11%)

Query: 1   MKKGNVFMSCALEEA-QNAALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           M +   +M+ ALE A + A   N  P VG V V +++I++   +          HAE +A
Sbjct: 33  MPQYREYMTQALELAHRGAGWVNPNPLVGTVVVRDSEILAAGYHDRYRG----PHAERMA 88

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
                       +    +  TLEPC        C   I    I R+  G+ +P       
Sbjct: 89  FDYADEH--GIDMHGATVIDTLEPCCHVGSQPACTDLILSHGITRVVVGSIDPNPIVAGK 146

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
           G +           E+   +       I + FF
Sbjct: 147 GLRILEETG----VEVVYDVMRAECDAINRHFF 175


>gi|284037818|ref|YP_003387748.1| riboflavin biosynthesis protein RibD [Spirosoma linguale DSM 74]
 gi|283817111|gb|ADB38949.1| riboflavin biosynthesis protein RibD [Spirosoma linguale DSM 74]
          Length = 352

 Score = 95.0 bits (236), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 38/163 (23%), Positives = 60/163 (36%), Gaps = 28/163 (17%)

Query: 4   GNVFMSCALEEAQNAALRNEI-P---VGAVAVLN----NKIISRAGNRNRELKDVTAHAE 55
              FM  ALE A     R  + P   VG V         +II    ++         HAE
Sbjct: 9   DERFMRRALELATLG--RGHVSPNPMVGCVITHGSGSQERIIGEGWHKRYGD----WHAE 62

Query: 56  ILAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGG 109
           + A+        Q +L E  +YVTLEPC        CA  +    ++R+     +P    
Sbjct: 63  VNAVNSVLPEHQQ-LLSEATVYVTLEPCSHWGKTPPCADLLIERHVKRVVCCNDDPNPLV 121

Query: 110 IENGTQFYTLATCHHSPEIYPGISEQRSRQIIQD---FFKERR 149
              G      A      ++  G+  ++ R +      FF+++R
Sbjct: 122 SGQGFAKLRAAG----IQVETGVLAEQGRLLNARFFTFFEQKR 160


>gi|304413736|ref|ZP_07395180.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase
           (N-terminal) and 5-amino-6-(5-phosphoribosylamino)
           uracil reductase (C-terminal) [Candidatus Regiella
           insecticola LSR1]
 gi|304283827|gb|EFL92221.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase
           (N-terminal) and 5-amino-6-(5-phosphoribosylamino)
           uracil reductase (C-terminal) [Candidatus Regiella
           insecticola LSR1]
          Length = 381

 Score = 95.0 bits (236), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 37/158 (23%), Positives = 52/158 (32%), Gaps = 24/158 (15%)

Query: 4   GNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
              +M+ ALE A          P VG V V   KI+    +          HAEI A+  
Sbjct: 9   DKKYMARALELALLGRFTTAPNPNVGCVIVREGKIVGEGYHVRAGE----PHAEINALNK 64

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
                         +YVTLEPC        C  A+  A I+R+     +P       G  
Sbjct: 65  AKAKDEA---RNATVYVTLEPCCHTGRTPPCTDALIAAGIKRVVVAMPDPNPQVSGRGIY 121

Query: 116 FYTLATCHHSPEIYPGIS----EQRSRQIIQDFFKERR 149
               A       +   I     + ++  I + F K  R
Sbjct: 122 QLQQAGI-----VVDYIGSTTIKAKAEDINRGFLKRMR 154


>gi|330506583|ref|YP_004383011.1| cytosine deaminase [Methanosaeta concilii GP-6]
 gi|328927391|gb|AEB67193.1| cytosine deaminase [Methanosaeta concilii GP-6]
          Length = 154

 Score = 95.0 bits (236), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 40/145 (27%), Positives = 64/145 (44%), Gaps = 12/145 (8%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           ++FM  AL+EA+  +    IP+GAV V   +II R  NR  + +D   HAEI  +R   R
Sbjct: 2   DIFMQAALDEARKGSREGGIPIGAVLVEEGRIIGRGRNRRVQQRDQMMHAEIDCLRNA-R 60

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
           +          LY TL PC MCA A+    I+++  G +       +            H
Sbjct: 61  LTGGYH--NAVLYTTLMPCYMCAGAVVYFGIKKVVVGEARSAPAARDFMQA--------H 110

Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149
             E+   +     R +++++    R
Sbjct: 111 GIEVVD-LDWAECRMLMEEYISMNR 134


>gi|319892826|ref|YP_004149701.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase /
           5-amino-6-(5- phosphoribosylamino)uracil reductase
           [Staphylococcus pseudintermedius HKU10-03]
 gi|317162522|gb|ADV06065.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase /
           5-amino-6-(5- phosphoribosylamino)uracil reductase
           [Staphylococcus pseudintermedius HKU10-03]
 gi|323464142|gb|ADX76295.1| riboflavin specific deaminase [Staphylococcus pseudintermedius
           ED99]
          Length = 348

 Score = 95.0 bits (236), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 38/157 (24%), Positives = 60/157 (38%), Gaps = 33/157 (21%)

Query: 5   NVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
           N ++  A++ A+         P VGAV V + +II    +  +       HAEI AI M 
Sbjct: 2   NHYLDYAIQLAEMTQGQTGTNPAVGAVIVKHGRIIGFGAHLKKGE----RHAEIQAIDMA 57

Query: 63  CRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116
                   +    +YV+LEPC        CA  I    I ++ Y A +            
Sbjct: 58  GAK----HVKGATIYVSLEPCSHYGSTPPCAQRIIDTGIAKVVYAAKDT----------- 102

Query: 117 YTLATCHHSPEIYPGISEQ-----RSRQIIQDFFKER 148
            TL    H   +  GI  +     R+ Q+   F++ +
Sbjct: 103 -TLQETSHDVMVQHGIEVEYRPHPRAEQLYAAFYRSK 138


>gi|254523112|ref|ZP_05135167.1| riboflavin biosynthesis protein RibD [Stenotrophomonas sp. SKA14]
 gi|219720703|gb|EED39228.1| riboflavin biosynthesis protein RibD [Stenotrophomonas sp. SKA14]
          Length = 396

 Score = 95.0 bits (236), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 32/149 (21%), Positives = 55/149 (36%), Gaps = 21/149 (14%)

Query: 4   GNVFMSCALEEAQN-AALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
            +  M+ AL  A+  A      P VG V     +++ +  ++         HAE+ A+R 
Sbjct: 44  DHQHMANALRLAERGAYTTRPNPMVGCVIAHGERVVGQGWHQRAGG----PHAEVFALRE 99

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
                          YVTLEPC        CA A+  A + R+     +P       G  
Sbjct: 100 AG-----SEARGATAYVTLEPCAHYGRTPPCALALIEAGVSRVVAAMRDPFPKVDGGGFD 154

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDF 144
               A      ++  G+   ++R++ + F
Sbjct: 155 LLREAG----IDVSEGLMAAQARELNKGF 179


>gi|254246078|ref|ZP_04939399.1| Pyrimidine reductase [Burkholderia cenocepacia PC184]
 gi|124870854|gb|EAY62570.1| Pyrimidine reductase [Burkholderia cenocepacia PC184]
          Length = 373

 Score = 95.0 bits (236), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 33/154 (21%), Positives = 52/154 (33%), Gaps = 20/154 (12%)

Query: 1   MKKGNVF--MSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56
           M     F  M  AL  A          P VG V V +  +I     +         HAE+
Sbjct: 1   MFSDTDFAHMQRALALAARGMYTTAPNPRVGCVIVKDGDVIGEGFTQPAGQD----HAEV 56

Query: 57  LAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGI 110
            A++          +    +YVTLEPC        CA A+  AR+ ++     +P     
Sbjct: 57  QALKDA--RSRGYDVAGSTVYVTLEPCSHFGRTPPCANALIDARVAKVVAAMEDPNPQVS 114

Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
             G      A      ++  G+    + ++   F
Sbjct: 115 GRGLGMLRDAG----IDVRCGLLANEAGELNIGF 144


>gi|294142852|ref|YP_003558830.1| riboflavin-specific deaminase [Shewanella violacea DSS12]
 gi|32562925|dbj|BAC79238.1| putative riboflavin deaminase [Shewanella violacea]
 gi|293329321|dbj|BAJ04052.1| riboflavin-specific deaminase, putative [Shewanella violacea DSS12]
          Length = 143

 Score = 95.0 bits (236), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 34/150 (22%), Positives = 59/150 (39%), Gaps = 21/150 (14%)

Query: 1   MKKGNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           M     FM  AL+ +Q A    +   PVG V VL++++I+    +         HAE+ A
Sbjct: 1   MDFDKKFMLRALKLSQTALPECQPNPPVGCVLVLDDQVIAEGYTQKIGGN----HAEMEA 56

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
           +           +  V  YVTLEPC        CA+ +  + I+R+     +P       
Sbjct: 57  LNA-----YDGSMGLVTAYVTLEPCSFVGRTPACASTLVKSGIKRVVVAILDPDLRNNGK 111

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQ 142
           G Q           ++  G++ +   + + 
Sbjct: 112 GIQTLEKEG----IKVDIGVASKEVSEFLS 137


>gi|307153182|ref|YP_003888566.1| CMP/dCMP deaminase zinc-binding protein [Cyanothece sp. PCC 7822]
 gi|306983410|gb|ADN15291.1| CMP/dCMP deaminase zinc-binding protein [Cyanothece sp. PCC 7822]
          Length = 165

 Score = 95.0 bits (236), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 36/150 (24%), Positives = 65/150 (43%), Gaps = 8/150 (5%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           ++    +   +  A +A  RN++ V A+    ++II    N   + ++   HAEI+ +  
Sbjct: 8   EQDERMIEKVIALASDAISRNKVGVAALLACGDEIIVLDHNPFADTQNPLDHAEIVVLNK 67

Query: 62  GCR---ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
                   SQE   ++ LY TLEPC +C  A S   IRR+ Y A            +  T
Sbjct: 68  AGSYLTKCSQEQKSKLTLYSTLEPCLICLLAASFVGIRRIVYAALAEDANQQGQLIKGMT 127

Query: 119 LATCHHS-----PEIYPGISEQRSRQIIQD 143
             T +        E+ PG+  ++ + +++ 
Sbjct: 128 ARTINPYLTKGEMELIPGVKREQGKALLEQ 157


>gi|325676856|ref|ZP_08156529.1| guanine deaminase [Rhodococcus equi ATCC 33707]
 gi|325552404|gb|EGD22093.1| guanine deaminase [Rhodococcus equi ATCC 33707]
          Length = 188

 Score = 94.6 bits (235), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 34/136 (25%), Positives = 53/136 (38%), Gaps = 34/136 (25%)

Query: 1   MKKGNVFMSCALEEAQNAALRN-EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
           M    + M+ A   A  +   N   P GAV   +  I++R  NR     DVTAH EI AI
Sbjct: 1   MTPDEL-MNEACRLAIESVENNWGGPFGAVIARDGDIVARGQNRVLLTGDVTAHGEIEAI 59

Query: 60  RMGCRILS--------------------------------QEILPEVDLYVTLEPCTMCA 87
           R   ++L+                                  +L  +++Y    PC MC 
Sbjct: 60  RKAVQVLNAAAPSISREHVDESTLKLVPRPEGSPDRVPERARMLMGMEIYTCGAPCPMCM 119

Query: 88  AAISLARIRRLYYGAS 103
           +AI  +R+  +Y+ + 
Sbjct: 120 SAIYWSRLDAVYFASD 135


>gi|67924763|ref|ZP_00518165.1| Riboflavin biosynthesis protein RibD:Riboflavin-specific deaminase,
           C-terminal [Crocosphaera watsonii WH 8501]
 gi|67853388|gb|EAM48745.1| Riboflavin biosynthesis protein RibD:Riboflavin-specific deaminase,
           C-terminal [Crocosphaera watsonii WH 8501]
          Length = 348

 Score = 94.6 bits (235), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 34/125 (27%), Positives = 50/125 (40%), Gaps = 19/125 (15%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC-- 83
           VGAV V N +II    +   +  D   HAE+ A+R        E      +YV LEPC  
Sbjct: 13  VGAVVVKNGQIIGEGFH--PKPGDP--HAEVFALRDAG-----ENAAGGTVYVNLEPCNH 63

Query: 84  ----TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139
                 C  A+  AR+ ++  G  +P       G      A      E+  G+ E   R+
Sbjct: 64  YGRTPPCTEALIAARVAKVVVGMVDPNPLVSGKGLAKLEDAG----IEVIVGVEETACRR 119

Query: 140 IIQDF 144
           + + F
Sbjct: 120 LNEAF 124


>gi|218710376|ref|YP_002417997.1| riboflavin biosynthesis protein RibD [Vibrio splendidus LGP32]
 gi|218323395|emb|CAV19572.1| Riboflavin biosynthesis protein ribD [Vibrio splendidus LGP32]
          Length = 374

 Score = 94.6 bits (235), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 36/149 (24%), Positives = 56/149 (37%), Gaps = 22/149 (14%)

Query: 8   MSCALEEAQNA-ALRNEIP-VGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           MS A++ A+         P VG V V  + +I+    +         AHAE+ A+RM   
Sbjct: 12  MSRAIKLAKRGIYTTAPNPNVGCVIVQTDGQIVGEGFHAKAGE----AHAEVHAMRMAGD 67

Query: 65  ILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
                       YVTLEPC        CA  +  A++ ++     +P       G +   
Sbjct: 68  KA-----KGAIAYVTLEPCSHYGRTPPCAEGLIKAQVAKVICAMQDPNPKVAGRGIKMLR 122

Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKE 147
            A      E+  G+ EQ +  +   F K 
Sbjct: 123 DAC----IEVEIGLLEQDALDLNPAFIKR 147


>gi|15642269|ref|NP_231902.1| riboflavin-specific deaminase [Vibrio cholerae O1 biovar El Tor
           str. N16961]
 gi|121586201|ref|ZP_01675992.1| riboflavin biosynthesis protein RibD [Vibrio cholerae 2740-80]
 gi|153820478|ref|ZP_01973145.1| riboflavin biosynthesis protein RibD [Vibrio cholerae NCTC 8457]
 gi|153823263|ref|ZP_01975930.1| riboflavin biosynthesis protein RibD [Vibrio cholerae B33]
 gi|227082395|ref|YP_002810946.1| riboflavin biosynthesis protein RibD [Vibrio cholerae M66-2]
 gi|229507656|ref|ZP_04397161.1| diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Vibrio cholerae BX 330286]
 gi|229512149|ref|ZP_04401628.1| diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Vibrio cholerae B33]
 gi|229519284|ref|ZP_04408727.1| diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Vibrio cholerae RC9]
 gi|229607160|ref|YP_002877808.1| diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Vibrio cholerae MJ-1236]
 gi|254849400|ref|ZP_05238750.1| riboflavin-specific deaminase [Vibrio cholerae MO10]
 gi|298500355|ref|ZP_07010160.1| riboflavin biosynthesis protein RibD [Vibrio cholerae MAK 757]
 gi|9656833|gb|AAF95415.1| riboflavin-specific deaminase [Vibrio cholerae O1 biovar El Tor
           str. N16961]
 gi|121549613|gb|EAX59637.1| riboflavin biosynthesis protein RibD [Vibrio cholerae 2740-80]
 gi|126508979|gb|EAZ71573.1| riboflavin biosynthesis protein RibD [Vibrio cholerae NCTC 8457]
 gi|126519224|gb|EAZ76447.1| riboflavin biosynthesis protein RibD [Vibrio cholerae B33]
 gi|227010283|gb|ACP06495.1| riboflavin biosynthesis protein RibD [Vibrio cholerae M66-2]
 gi|229343973|gb|EEO08948.1| diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Vibrio cholerae RC9]
 gi|229352114|gb|EEO17055.1| diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Vibrio cholerae B33]
 gi|229355161|gb|EEO20082.1| diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Vibrio cholerae BX 330286]
 gi|229369815|gb|ACQ60238.1| diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Vibrio cholerae MJ-1236]
 gi|254845105|gb|EET23519.1| riboflavin-specific deaminase [Vibrio cholerae MO10]
 gi|297541048|gb|EFH77102.1| riboflavin biosynthesis protein RibD [Vibrio cholerae MAK 757]
          Length = 367

 Score = 94.6 bits (235), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 35/152 (23%), Positives = 54/152 (35%), Gaps = 21/152 (13%)

Query: 4   GNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
            +  MS A+E A       +  P VG V     +I+    +          HAE+ A+R 
Sbjct: 8   DHQMMSRAIELAWRGRFTTSPNPNVGCVITRGEQIVGEGFHFRAGE----PHAEVHAMRQ 63

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
              +           YVTLEPC        CA  +  A + ++     +P       G Q
Sbjct: 64  AGELT-----RGATAYVTLEPCSHYGRTPPCAEGLIKAGVAKVICAMQDPNPQVAGKGVQ 118

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
               A      E+  G+ E  +R + + F K 
Sbjct: 119 MLRDAG----IEVEVGLLEADARVLNRGFLKR 146


>gi|328777317|ref|XP_003249314.1| PREDICTED: tRNA-specific adenosine deaminase-like protein 3-like
           [Apis mellifera]
          Length = 389

 Score = 94.6 bits (235), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 24/101 (23%), Positives = 47/101 (46%)

Query: 43  RNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGA 102
           R     + T  +E              +      ++ +EPC +CA A+  +RI R++YG 
Sbjct: 282 RRGRRNNSTCKSEQAGATNIAEKCGPYLCTGYWTFLLMEPCPLCAMALLHSRILRIFYGI 341

Query: 103 SNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQD 143
           SN   G +   T  + +   +H  +++ G+ EQ  ++++QD
Sbjct: 342 SNKTTGVLGTKTILHAVPGLNHRYQVWSGVLEQECQRVLQD 382


>gi|294341030|emb|CAZ89425.1| Riboflavin biosynthesis protein ribD [Includes:
           Diaminohydroxyphosphoribosylaminopyrimidine deaminase
           (Riboflavin-specific deaminase);
           5-amino-6-(5-phosphoribosylamino)uracil reductase (HTP
           reductase)] [Thiomonas sp. 3As]
          Length = 387

 Score = 94.6 bits (235), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 35/154 (22%), Positives = 57/154 (37%), Gaps = 18/154 (11%)

Query: 2   KKGNVFMSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
           ++   FM  AL+ A +A  R    P VG V V + +++         L     HAE+ A+
Sbjct: 10  EQDQRFMRRALDLAHSAMYRTSPNPRVGCVLVRDGQVLGEGA----TLAAGQDHAEVQAV 65

Query: 60  RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113
           +       +        YVTLEPC        CA  ++   + R+     +P       G
Sbjct: 66  KQAWERGHEVR--GATAYVTLEPCAHHGRTPPCADLLATQGVARVVAALVDPNPLVAGQG 123

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
            Q    A      ++  G+    +R+I   F   
Sbjct: 124 LQRLRDAG----IQVDVGLFADEAREINLGFISR 153


>gi|121729759|ref|ZP_01682198.1| riboflavin biosynthesis protein RibD [Vibrio cholerae V52]
 gi|147673692|ref|YP_001217785.1| riboflavin biosynthesis protein RibD [Vibrio cholerae O395]
 gi|121628510|gb|EAX60996.1| riboflavin biosynthesis protein RibD [Vibrio cholerae V52]
 gi|146315575|gb|ABQ20114.1| riboflavin biosynthesis protein RibD [Vibrio cholerae O395]
 gi|227014167|gb|ACP10377.1| riboflavin biosynthesis protein RibD [Vibrio cholerae O395]
          Length = 367

 Score = 94.6 bits (235), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 35/152 (23%), Positives = 54/152 (35%), Gaps = 21/152 (13%)

Query: 4   GNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
            +  MS A+E A       +  P VG V     +I+    +          HAE+ A+R 
Sbjct: 8   DHQMMSRAIELAWRGHFTTSPNPNVGCVITRGEQIVGEGFHFRAGE----PHAEVHAMRQ 63

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
              +           YVTLEPC        CA  +  A + ++     +P       G Q
Sbjct: 64  AGELT-----RGATAYVTLEPCSHYGRTPPCAEGLIKAGVAKVICAMQDPNPQVAGKGVQ 118

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
               A      E+  G+ E  +R + + F K 
Sbjct: 119 MLRDAG----IEVEVGLLEADARVLNRGFLKR 146


>gi|255747035|ref|ZP_05420980.1| diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Vibrio cholera CIRS 101]
 gi|262161421|ref|ZP_06030531.1| diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Vibrio cholerae INDRE 91/1]
 gi|255735437|gb|EET90837.1| diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Vibrio cholera CIRS 101]
 gi|262028732|gb|EEY47386.1| diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Vibrio cholerae INDRE 91/1]
          Length = 365

 Score = 94.6 bits (235), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 35/152 (23%), Positives = 54/152 (35%), Gaps = 21/152 (13%)

Query: 4   GNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
            +  MS A+E A       +  P VG V     +I+    +          HAE+ A+R 
Sbjct: 6   DHQMMSRAIELAWRGRFTTSPNPNVGCVITRGEQIVGEGFHFRAGE----PHAEVHAMRQ 61

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
              +           YVTLEPC        CA  +  A + ++     +P       G Q
Sbjct: 62  AGELT-----RGATAYVTLEPCSHYGRTPPCAEGLIKAGVAKVICAMQDPNPQVAGKGVQ 116

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
               A      E+  G+ E  +R + + F K 
Sbjct: 117 MLRDAG----IEVEVGLLEADARVLNRGFLKR 144


>gi|88859176|ref|ZP_01133817.1| Riboflavin biosynthesis protein [Pseudoalteromonas tunicata D2]
 gi|88819402|gb|EAR29216.1| Riboflavin biosynthesis protein [Pseudoalteromonas tunicata D2]
          Length = 373

 Score = 94.6 bits (235), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 33/154 (21%), Positives = 58/154 (37%), Gaps = 21/154 (13%)

Query: 4   GNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
              +M+ A+E A+      +  P VG V V + +I+ +  ++         HAE+ A+  
Sbjct: 7   DYQYMALAIELAKKGRYTTSPNPNVGCVLVKDGQIVGQGYHQKAGEG----HAEVHALAQ 62

Query: 62  GCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQ 115
                 +E       YVTLEPC+       CA A+  A + ++     +P       G  
Sbjct: 63  A-----KEQALGATAYVTLEPCSHTGRTGPCALALVNAGVIKVIAAMVDPNPAVSGRGLA 117

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
               A      +   G+ +  +  +   F K  R
Sbjct: 118 ILEKAG----IQTAHGLMQVEAEALNVGFLKRMR 147


>gi|50365494|ref|YP_053919.1| cytosine deaminase [Mesoplasma florum L1]
 gi|50364050|gb|AAT76035.1| cytosine deaminase [Mesoplasma florum L1]
          Length = 142

 Score = 94.6 bits (235), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 37/127 (29%), Positives = 65/127 (51%), Gaps = 3/127 (2%)

Query: 23  EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEP 82
           +IPV +  + +NKI+ ++ N + ++K +T HAEI  +    + + +  L E  L+ TLEP
Sbjct: 19  DIPVFSCLIKDNKIVFKSKNNSYKIKKITGHAEINVMNKAFKKIKKGNLSEYTLFTTLEP 78

Query: 83  CTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQ 142
           C MC  AI  A+I+ + Y   N K     N      +       +      + + ++II 
Sbjct: 79  CLMCYGAIKQAKIKEIIYLTENVKL-SFRNDVNIDQIKINIRKLDHEE--LQSKYQKIIS 135

Query: 143 DFFKERR 149
           DFF+++R
Sbjct: 136 DFFQKKR 142


>gi|262168270|ref|ZP_06035967.1| diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Vibrio cholerae RC27]
 gi|262023162|gb|EEY41866.1| diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Vibrio cholerae RC27]
          Length = 365

 Score = 94.6 bits (235), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 35/152 (23%), Positives = 54/152 (35%), Gaps = 21/152 (13%)

Query: 4   GNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
            +  MS A+E A       +  P VG V     +I+    +          HAE+ A+R 
Sbjct: 6   DHQMMSRAIELAWRGHFTTSPNPNVGCVITRGEQIVGEGFHFRAGE----PHAEVHAMRQ 61

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
              +           YVTLEPC        CA  +  A + ++     +P       G Q
Sbjct: 62  AGELT-----RGATAYVTLEPCSHYGRTPPCAEGLIKAGVAKVICAMQDPNPQVAGKGVQ 116

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
               A      E+  G+ E  +R + + F K 
Sbjct: 117 MLRDAG----IEVEVGLLEADARVLNRGFLKR 144


>gi|78065536|ref|YP_368305.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase /
           diaminohydroxyphosphoribosylaminopyrimidine deaminase
           [Burkholderia sp. 383]
 gi|77966281|gb|ABB07661.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Burkholderia sp.
           383]
          Length = 373

 Score = 94.6 bits (235), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 33/154 (21%), Positives = 53/154 (34%), Gaps = 20/154 (12%)

Query: 1   MKKGNVF--MSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56
           M     F  M  AL  A          P VG V V + ++I     +         HAE+
Sbjct: 1   MFSDIDFAHMQRALTLAARGMYTTAPNPRVGCVIVKDGEVIGEGFTQPAGQD----HAEV 56

Query: 57  LAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGI 110
            A++          +    +YVTLEPC        CA A+  AR+ ++     +P     
Sbjct: 57  QALKDA--RARGYDVAGSTVYVTLEPCSHFGRTPPCANALIEARVAKVVAAMEDPNPQVS 114

Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
             G      A      ++  G+    + ++   F
Sbjct: 115 GRGLGMLRDAG----IDVRCGLLAHEAGELNIGF 144


>gi|295424908|ref|ZP_06817620.1| riboflavin biosynthesis protein RibD [Lactobacillus amylolyticus
           DSM 11664]
 gi|295065347|gb|EFG56243.1| riboflavin biosynthesis protein RibD [Lactobacillus amylolyticus
           DSM 11664]
          Length = 347

 Score = 94.6 bits (235), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 37/141 (26%), Positives = 55/141 (39%), Gaps = 20/141 (14%)

Query: 8   MSCALEEAQNAA-LRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M  AL+EA        + P VGAV V +N +++   + +        HAE  AI      
Sbjct: 1   MQLALQEACKGRHQTWKNPLVGAVIVKDNHVLATGYHHHFGE----RHAERDAI----SK 52

Query: 66  LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
           L+ E L    LYVTLEPC        C+  I    I+R+     +P       G      
Sbjct: 53  LTPEQLFNSTLYVTLEPCNHFGKQPPCSQLIVNKHIKRVVIAQIDPHKLVTGKGIAALKE 112

Query: 120 ATCHHSPEIYPGISEQRSRQI 140
                  ++  GI    +R++
Sbjct: 113 NG----IQVATGILANEARKL 129


>gi|119505172|ref|ZP_01627247.1| putative zinc-binding hydrolase [marine gamma proteobacterium
          HTCC2080]
 gi|119458863|gb|EAW39963.1| putative zinc-binding hydrolase [marine gamma proteobacterium
          HTCC2080]
          Length = 78

 Score = 94.6 bits (235), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 29/64 (45%), Positives = 40/64 (62%), Gaps = 1/64 (1%)

Query: 21 RNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVT 79
          + E+PVGAV   +  ++++ A N      D TAHAE+LA+R+G   L+   LP   LYVT
Sbjct: 14 KGEVPVGAVLAADSGEVLAVASNAQIMSCDPTAHAEMLALRLGAEKLNNYRLPGCTLYVT 73

Query: 80 LEPC 83
          LEPC
Sbjct: 74 LEPC 77


>gi|254495519|ref|ZP_05108443.1| riboflavin biosynthesis protein RibD [Polaribacter sp. MED152]
 gi|85819875|gb|EAQ41032.1| riboflavin biosynthesis protein RibD [Polaribacter sp. MED152]
          Length = 337

 Score = 94.6 bits (235), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 34/126 (26%), Positives = 55/126 (43%), Gaps = 17/126 (13%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC-- 83
           VGAV V  NKII+     N        HAE+ AI     +  + +L E  +YVTLEPC  
Sbjct: 17  VGAVIVHQNKIIAEGFTSNYGGN----HAEVNAI---IAVKDKSLLKEATIYVTLEPCSH 69

Query: 84  ----TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139
                 CA  I   +++++  G  +        G +    A      ++  G+ E++ ++
Sbjct: 70  YGKTPPCADLIIKHKLKKVVIGTLDTNSLVAGKGVERIEKAG----IDVKVGVLEEKCKK 125

Query: 140 IIQDFF 145
             + FF
Sbjct: 126 HHKRFF 131


>gi|258651398|ref|YP_003200554.1| CMP/dCMP deaminase zinc-binding [Nakamurella multipartita DSM
           44233]
 gi|258554623|gb|ACV77565.1| CMP/dCMP deaminase zinc-binding [Nakamurella multipartita DSM
           44233]
          Length = 164

 Score = 94.6 bits (235), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 27/103 (26%), Positives = 42/103 (40%), Gaps = 2/103 (1%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIR 60
           +     +   +E A+ A    + P G+V V  +  +++   NR     D T H E    R
Sbjct: 3   ETDLRHLRRCVELAEQALDSGDEPFGSVLVTGDGTVLAEDHNRV-AGGDRTRHPEFELAR 61

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
                LS        +Y + E C MCAAA +   + R+ Y  S
Sbjct: 62  WAAANLSPHERRAATVYTSGEHCPMCAAAHAWVGLGRIVYATS 104


>gi|209884995|ref|YP_002288852.1| riboflavin biosynthesis protein RibD [Oligotropha carboxidovorans
           OM5]
 gi|209873191|gb|ACI92987.1| riboflavin biosynthesis protein RibD [Oligotropha carboxidovorans
           OM5]
          Length = 380

 Score = 94.6 bits (235), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 34/145 (23%), Positives = 49/145 (33%), Gaps = 21/145 (14%)

Query: 3   KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           + + FM  AL   +         P VGAV V +  I+ R   +         HAE  A++
Sbjct: 14  EDHRFMQLALALGRRGQGATWPNPAVGAVVVKDGVILGRGWTQPGGR----PHAEPQALQ 69

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
                          LYVTLEPC        C  AI ++ I R+     +P       G 
Sbjct: 70  RAGEAA-----RGATLYVTLEPCSHYGKSPPCVDAIIVSGIARVVSAIEDPNPQVAGQGH 124

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQ 139
                A       +  G+    + Q
Sbjct: 125 VRLRDAG----ITVDVGLCRDEAAQ 145


>gi|15805630|ref|NP_294326.1| cytidine/deoxycytidylate deaminase/NUDIX/methyltransferase
           domain-containing protein [Deinococcus radiodurans R1]
 gi|6458301|gb|AAF10182.1|AE001918_7 cytidine/deoxycytidylate deaminase/nudix/methyltransferase domains
           protein [Deinococcus radiodurans R1]
          Length = 548

 Score = 94.6 bits (235), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 38/116 (32%), Positives = 50/116 (43%), Gaps = 13/116 (11%)

Query: 11  ALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNR----------NRELKDVTAHAEILAI 59
           A+ EA N  L    P+GA  V     I+ R  NR               D  AHAEI A+
Sbjct: 12  AMSEAWNGFLYGSYPIGACIVDAQGNIVGRGRNRLGEPRRAHAGVIGGHD-LAHAEINAL 70

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
                +   E L    L  T+EPC  CA A++++ IR + Y A +P GG     T 
Sbjct: 71  LSVPDLRRPECLSWTVL-TTVEPCPQCAGAVAMSGIRGVSYAAPDPWGGCARLLTD 125


>gi|116073254|ref|ZP_01470516.1| Riboflavin biosynthesis protein RibD [Synechococcus sp. RS9916]
 gi|116068559|gb|EAU74311.1| Riboflavin biosynthesis protein RibD [Synechococcus sp. RS9916]
          Length = 386

 Score = 94.6 bits (235), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 34/149 (22%), Positives = 53/149 (35%), Gaps = 26/149 (17%)

Query: 7   FMSCALEEAQNAALRNEI---P-VGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRM 61
           +M  AL+ A  A         P VGAV +    +++    +          HAE+ A+  
Sbjct: 11  WMRRALQLA--ALADGHTSPNPLVGAVVLDAAGQLVGEGFHARAGE----PHAEVGALAQ 64

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
                         + VTLEPC        CA A+  A I+R+    ++P       G Q
Sbjct: 65  AGDAA-----RGGTIVVTLEPCCHHGRTPPCADAVIAAGIQRVVVALTDPDPRVAGGGLQ 119

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDF 144
               A      E+  G+ E  +    + F
Sbjct: 120 RLRDAGL----EVISGVLEAEAAYQNRAF 144


>gi|29827131|ref|NP_821765.1| cytidine/deoxycytidine deaminase [Streptomyces avermitilis MA-4680]
 gi|29604229|dbj|BAC68300.1| putative cytidine/deoxycytidine deaminase [Streptomyces avermitilis
           MA-4680]
          Length = 145

 Score = 94.6 bits (235), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 31/145 (21%), Positives = 58/145 (40%), Gaps = 7/145 (4%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           +    +  A+  A +A    + P G++    +  I++ A N  R   D+ AH E+   R 
Sbjct: 5   EDETLLRRAIGIAAHAVTLGDAPYGSLLTGPDGAILAEAHNTVRRDNDIAAHPELKLARW 64

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
             R L+        +Y + +PCTMCA  I  + I R+ Y  S       E   +    + 
Sbjct: 65  AARELAPAAAARTTMYTSCQPCTMCAGGIVRSGIGRVVYALS------TEQLVELNPQSG 118

Query: 122 CHHSPEIYPGISEQRSRQIIQDFFK 146
              +      +  + +R  I  +++
Sbjct: 119 DWPTVPQDGPVLFEEARAPIDAYYR 143


>gi|268611450|ref|ZP_06145177.1| putative Cytidine/deoxycytidylate deaminase, zinc-binding region
           (CMP/dCMP deaminase, zinc-binding) protein [Ruminococcus
           flavefaciens FD-1]
          Length = 211

 Score = 94.6 bits (235), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 41/140 (29%), Positives = 61/140 (43%), Gaps = 16/140 (11%)

Query: 12  LEEAQNAALRNEIPVGA-VAVLNNKIISRAGNRNRE--LKDV-TAHAEILAIRMG-CRIL 66
           LEEA  A     IPVGA V   + +++ +  NR  E    +  TAHAE+  I+   CR  
Sbjct: 13  LEEAWTAFTSGSIPVGAAVFSKDGELLVKDHNRRNEPGTLNPRTAHAELNVIQHIDCRYG 72

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
                 E +LY ++EPC MC  AI ++ I+ L+ G+ +   G +       T        
Sbjct: 73  LNIR--ETELYTSMEPCPMCMGAIVMSNIKHLHCGSHDRWCGALH---LLDTDPYMRSQH 127

Query: 127 EIYPGISEQRSRQIIQDFFK 146
                I E        +FF+
Sbjct: 128 ISVSDIPED------TEFFQ 141


>gi|171315490|ref|ZP_02904726.1| riboflavin biosynthesis protein RibD [Burkholderia ambifaria MEX-5]
 gi|171099327|gb|EDT44065.1| riboflavin biosynthesis protein RibD [Burkholderia ambifaria MEX-5]
          Length = 373

 Score = 94.6 bits (235), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 33/154 (21%), Positives = 52/154 (33%), Gaps = 20/154 (12%)

Query: 1   MKKGNVF--MSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56
           M     F  M  AL  A          P VG V V +  +I     +         HAE+
Sbjct: 1   MFSDTDFAHMQRALTLAARGMYTTAPNPRVGCVIVKDGNVIGEGFTQPAGQD----HAEV 56

Query: 57  LAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGI 110
            A++          +    +YVTLEPC        CA A+  AR+ ++     +P     
Sbjct: 57  QALKNA--RTRGHDVAGSTVYVTLEPCSHFGRTPPCANALIDARVAKVVAAMEDPNPQVS 114

Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
             G      A      ++  G+    + ++   F
Sbjct: 115 GRGLGMLRDAG----IDVRCGLLANEAGELNIGF 144


>gi|212212876|ref|YP_002303812.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Coxiella
           burnetii CbuG_Q212]
 gi|212011286|gb|ACJ18667.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Coxiella
           burnetii CbuG_Q212]
          Length = 354

 Score = 94.6 bits (235), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 34/125 (27%), Positives = 49/125 (39%), Gaps = 17/125 (13%)

Query: 7   FMSCALEEA--QNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           ++  AL  A  +         VGAV V ++KIIS   ++         HAE+ AI+    
Sbjct: 8   YLKKALSLAEIRRGFCAPNPSVGAVVVKDDKIISTGFHKR----SGLPHAEVEAIKSLGD 63

Query: 65  ILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
                      LYVTLEPC        C   I  + I+ +YYG  +P       G +   
Sbjct: 64  KA-----RGAALYVTLEPCCHFGKTPPCTDLIIQSGIKAVYYGLHDPNLAVCGKGIEQLQ 118

Query: 119 LATCH 123
            A  +
Sbjct: 119 RAGVN 123


>gi|94970364|ref|YP_592412.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase /
           diaminohydroxyphosphoribosylaminopyrimidine deaminase
           [Candidatus Koribacter versatilis Ellin345]
 gi|94552414|gb|ABF42338.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Candidatus
           Koribacter versatilis Ellin345]
          Length = 399

 Score = 94.6 bits (235), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 39/155 (25%), Positives = 57/155 (36%), Gaps = 22/155 (14%)

Query: 4   GNVFMSCALEEAQN--AALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIR 60
              F   ALE A    A       VGAV V  + ++I    +      D   HAE+LA+ 
Sbjct: 16  DERFTLRALELASKGIAMASPNPRVGAVVVNADGEVIGEGFHM----YDGLKHAEVLALE 71

Query: 61  MGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGT 114
                          LY+ LEPC+       CA A+  A I+R+     +P       G 
Sbjct: 72  QAGNAA-----RGATLYLNLEPCSHEGRTGPCADAVIAAGIKRVVCSMPDPNPLVAGRGF 126

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
                A      E+  G+    +R++ + F K  R
Sbjct: 127 AKLREAG----VELLVGVFADYARKLNEGFSKRIR 157


>gi|327484786|gb|AEA79193.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase [Vibrio
           cholerae LMA3894-4]
          Length = 365

 Score = 94.6 bits (235), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 35/152 (23%), Positives = 54/152 (35%), Gaps = 21/152 (13%)

Query: 4   GNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
            +  MS A+E A       +  P VG V     +I+    +          HAE+ A+R 
Sbjct: 6   DHQMMSRAIELAWRGRFTTSPNPNVGCVITRGEQIVGEGFHFRAGE----PHAEVHAMRQ 61

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
              +           YVTLEPC        CA  +  A + ++     +P       G Q
Sbjct: 62  AGELT-----RGATAYVTLEPCSHYGRTPPCAEGLIKAGVAKVICAMQDPNPQVAGKGVQ 116

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
               A      E+  G+ E  +R + + F K 
Sbjct: 117 MLRDAG----IEVEVGLLEADARVLNRGFLKR 144


>gi|88809077|ref|ZP_01124586.1| riboflavin biosynthesis protein RibD [Synechococcus sp. WH 7805]
 gi|88787019|gb|EAR18177.1| riboflavin biosynthesis protein RibD [Synechococcus sp. WH 7805]
          Length = 372

 Score = 94.6 bits (235), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 34/147 (23%), Positives = 49/147 (33%), Gaps = 22/147 (14%)

Query: 7   FMSCALEEAQNA--ALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGC 63
           +M  ALE A  A         VGAV +     ++    +          HAE+ A+    
Sbjct: 14  WMRRALELAALADGYTSPNPLVGAVVLDPSGTLVGEGFHARAGE----PHAEVGALAQAG 69

Query: 64  RILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFY 117
                       + VTLEPC        C  A+  A I R+    ++P       G Q  
Sbjct: 70  DAA-----RGGTIIVTLEPCCHHGRTPPCTDALIKAGIARVVVALTDPDPRVAGGGLQRL 124

Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDF 144
             A      E+  G+ E  + Q    F
Sbjct: 125 RDAG----VEVISGVLEAEAAQQNYAF 147


>gi|302556984|ref|ZP_07309326.1| cytidine/deoxycytidylate deaminase, zinc-binding region
           [Streptomyces griseoflavus Tu4000]
 gi|302474602|gb|EFL37695.1| cytidine/deoxycytidylate deaminase, zinc-binding region
           [Streptomyces griseoflavus Tu4000]
          Length = 161

 Score = 94.2 bits (234), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 31/152 (20%), Positives = 55/152 (36%), Gaps = 11/152 (7%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           ++   +E A  A    + P G+V V  +  +++   NR     D T H E    R     
Sbjct: 10  YLRRCVELAAEALESGDEPFGSVLVAGDGTVLAEDHNRV-ASGDRTRHPEFELARWAAAR 68

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA-TCHH 124
           +         +Y + E C MCAAA +   + R+ Y AS+ +                   
Sbjct: 69  MPPAERAAATVYTSGEHCPMCAAAHAWVGLGRIVYVASSAQLTAWLGELGVPAPPVRALP 128

Query: 125 SPEIYPGI--------SEQRSRQIIQDFFKER 148
             E+ PG+          +   ++ + F + R
Sbjct: 129 VSEVAPGVTVDGPVPELAEEVGRLHRRFHRGR 160


>gi|312139695|ref|YP_004007031.1| cytidine/deoxycytidylate deaminase [Rhodococcus equi 103S]
 gi|311889034|emb|CBH48347.1| putative cytidine/deoxycytidylate deaminase [Rhodococcus equi 103S]
          Length = 194

 Score = 94.2 bits (234), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 34/136 (25%), Positives = 53/136 (38%), Gaps = 34/136 (25%)

Query: 1   MKKGNVFMSCALEEAQNAALRN-EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
           M    + M+ A   A  +   N   P GAV   +  I++R  NR     DVTAH EI AI
Sbjct: 7   MTPDEL-MNEACRLAIESVENNWGGPFGAVIARDGDIVARGQNRVLLTGDVTAHGEIEAI 65

Query: 60  RMGCRILS--------------------------------QEILPEVDLYVTLEPCTMCA 87
           R   ++L+                                  +L  +++Y    PC MC 
Sbjct: 66  RKAVQVLNAAAPSISREHVDESTLKLVPRPEGSPDRVPERARMLMGMEIYTCGAPCPMCM 125

Query: 88  AAISLARIRRLYYGAS 103
           +AI  +R+  +Y+ + 
Sbjct: 126 SAIYWSRLDAVYFASD 141


>gi|29653981|ref|NP_819673.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Coxiella
           burnetii RSA 493]
 gi|29541244|gb|AAO90187.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Coxiella
           burnetii RSA 493]
          Length = 354

 Score = 94.2 bits (234), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 34/125 (27%), Positives = 49/125 (39%), Gaps = 17/125 (13%)

Query: 7   FMSCALEEA--QNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           ++  AL  A  +         VGAV V ++KIIS   ++         HAE+ AI+    
Sbjct: 8   YLKKALSLAEIRRGFCAPNPSVGAVVVKDDKIISTGFHKR----SGLPHAEVEAIKSLGD 63

Query: 65  ILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
                      LYVTLEPC        C   I  + I+ +YYG  +P       G +   
Sbjct: 64  KA-----RGAALYVTLEPCCHFGKTPPCTDLIIQSGIKAVYYGLHDPNLAVCGKGIEQLQ 118

Query: 119 LATCH 123
            A  +
Sbjct: 119 RAGVN 123


>gi|254370029|ref|ZP_04986036.1| predicted protein [Francisella tularensis subsp. tularensis
          FSC033]
 gi|151568274|gb|EDN33928.1| predicted protein [Francisella tularensis subsp. tularensis
          FSC033]
          Length = 66

 Score = 94.2 bits (234), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 24/61 (39%), Positives = 35/61 (57%)

Query: 2  KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           +   FM  A ++A  A    E+P+GAV V +++II +  N+   L D TAHAEIL +R 
Sbjct: 6  DQDIFFMQKAYQQALLAYQAGEVPIGAVLVRDDQIIVQNFNQTIGLNDPTAHAEILVLRS 65

Query: 62 G 62
           
Sbjct: 66 A 66


>gi|77458955|ref|YP_348461.1| cytidine/deoxycytidylate deaminase, zinc-binding region
           [Pseudomonas fluorescens Pf0-1]
 gi|77382958|gb|ABA74471.1| cytidine/deoxycytidylate deaminase family protein [Pseudomonas
           fluorescens Pf0-1]
          Length = 169

 Score = 94.2 bits (234), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 35/153 (22%), Positives = 59/153 (38%), Gaps = 11/153 (7%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRE-LKDVTAHAEILAIRM 61
               +   +  ++ +  R   P  A+    N K+I  AGN +     D T HAE++A   
Sbjct: 16  DLTLLRQTIALSEASKQRGRHPFAALVADRNGKVIVEAGNNSMPPEGDPTQHAELVAAAA 75

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIE---------N 112
             ++LS + L    LY + EPC MCA A+    I R+ Y  S     G+          +
Sbjct: 76  AAKLLSPQELELCTLYTSAEPCCMCAGAVYWTGIGRVVYALSEHALLGLTGDHPENPTFS 135

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
                  A       +   + E  + +  + F+
Sbjct: 136 LPCREVFAKGQRKVSVLGPMLEGEAAEPHRGFW 168


>gi|107022039|ref|YP_620366.1| riboflavin biosynthesis protein RibD [Burkholderia cenocepacia AU
           1054]
 gi|116688983|ref|YP_834606.1| riboflavin biosynthesis protein RibD [Burkholderia cenocepacia
           HI2424]
 gi|105892228|gb|ABF75393.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Burkholderia
           cenocepacia AU 1054]
 gi|116647072|gb|ABK07713.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase /
           diaminohydroxyphosphoribosylaminopyrimidine deaminase
           [Burkholderia cenocepacia HI2424]
          Length = 373

 Score = 94.2 bits (234), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 33/154 (21%), Positives = 52/154 (33%), Gaps = 20/154 (12%)

Query: 1   MKKGNVF--MSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56
           M     F  M  AL  A          P VG V V +  +I     +         HAE+
Sbjct: 1   MFSDTDFAHMQRALALAARGMYTTAPNPRVGCVIVKDGDVIGEGFTQPAGQD----HAEV 56

Query: 57  LAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGI 110
            A++          +    +YVTLEPC        CA A+  AR+ ++     +P     
Sbjct: 57  QALKDA--RSRGYDVAGSTVYVTLEPCSHFGRTPPCANALIDARVAKVVAAMEDPNPQVS 114

Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
             G      A      ++  G+    + ++   F
Sbjct: 115 GRGLGMLRDAG----IDVRCGLLAHEAGELNIGF 144


>gi|170732274|ref|YP_001764221.1| riboflavin biosynthesis protein RibD [Burkholderia cenocepacia
           MC0-3]
 gi|169815516|gb|ACA90099.1| riboflavin biosynthesis protein RibD [Burkholderia cenocepacia
           MC0-3]
          Length = 373

 Score = 94.2 bits (234), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 33/154 (21%), Positives = 52/154 (33%), Gaps = 20/154 (12%)

Query: 1   MKKGNVF--MSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56
           M     F  M  AL  A          P VG V V +  +I     +         HAE+
Sbjct: 1   MFSDTDFAHMQRALALAARGMYTTAPNPRVGCVIVKDGDVIGEGFTQPAGQD----HAEV 56

Query: 57  LAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGI 110
            A++          +    +YVTLEPC        CA A+  AR+ ++     +P     
Sbjct: 57  QALKDA--RSRGYDVAGSTVYVTLEPCSHFGRTPPCANALIDARVAKVVAAMEDPNPQVS 114

Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
             G      A      ++  G+    + ++   F
Sbjct: 115 GRGLGMLRDAG----IDVRCGLLAHEAGELNIGF 144


>gi|238490276|ref|XP_002376375.1| cytosine deaminase, putative [Aspergillus flavus NRRL3357]
 gi|220696788|gb|EED53129.1| cytosine deaminase, putative [Aspergillus flavus NRRL3357]
          Length = 162

 Score = 94.2 bits (234), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 28/103 (27%), Positives = 47/103 (45%), Gaps = 1/103 (0%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIR 60
           +    ++   ++ A+ A    + P G+V V    K+I    NR     DVT H E   ++
Sbjct: 4   ESDINYLRRCVDLAREALEAGDSPFGSVLVDAAGKVIYEDRNRTVTEADVTWHPEFTIVK 63

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
              + L+        +Y + E C MCAAA + A + R+ Y +S
Sbjct: 64  WAQKNLTPTERAAATVYTSGEHCPMCAAAHANAGLGRIVYASS 106


>gi|121602090|ref|YP_988935.1| riboflavin biosynthesis protein RibD [Bartonella bacilliformis
           KC583]
 gi|120614267|gb|ABM44868.1| riboflavin biosynthesis protein RibD [Bartonella bacilliformis
           KC583]
          Length = 374

 Score = 94.2 bits (234), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 35/154 (22%), Positives = 58/154 (37%), Gaps = 25/154 (16%)

Query: 3   KGNVFMSCALEEAQN-AALRNEIP-VGAVAVLNNK----IISRAGNRNRELKDVTAHAEI 56
           +   FM+ A+  A+    L NE P VGA+ V N+     I+               HAE+
Sbjct: 6   QDCRFMAAAIRLAERHVGLTNENPSVGALIVRNDSTGPFIVGYG----VTALRGRPHAEV 61

Query: 57  LAIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGI 110
            A++M   +           Y+TLEPC        C  ++  A I R+     +P     
Sbjct: 62  QALQMAGPLS-----KGATAYITLEPCVHYGKTSPCVDSLIDAGIARVVIALIDPDERVC 116

Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
                    A      E+  G+ E+ S +++  +
Sbjct: 117 GRSIALLQAAD----IEVVKGVLEKESSEMLSAY 146


>gi|156368641|ref|XP_001627801.1| predicted protein [Nematostella vectensis]
 gi|156214721|gb|EDO35701.1| predicted protein [Nematostella vectensis]
          Length = 291

 Score = 94.2 bits (234), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 33/149 (22%), Positives = 61/149 (40%), Gaps = 27/149 (18%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNN--KIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           ++  A + AQ A  + ++ +GA  V     ++++ A +          HA ++ I +  +
Sbjct: 138 YVRFAQQAAQYAKSKQQVGIGAAMVDPETKRVVAVACDLRHHGH-PLQHAVMVVIDLVAQ 196

Query: 65  ILS--QEIL----------------------PEVDLYVTLEPCTMCAAAISLARIRRLYY 100
                   L                         DLYVT EPC MCA A+  +RIRR++Y
Sbjct: 197 SQGAGSWCLGGRDMDASLKNINSKLDLPYLCTGYDLYVTQEPCVMCAMALVHSRIRRVFY 256

Query: 101 GASNPKGGGIENGTQFYTLATCHHSPEIY 129
              +   G + +  + +T    +H  E++
Sbjct: 257 SCGDSIRGALGSKYKLHTQKALNHHFEVF 285


>gi|149392256|gb|ABR25967.1| cytidine/deoxycytidylate deaminase family protein [Oryza sativa
           Indica Group]
 gi|215713595|dbj|BAG94732.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 116

 Score = 94.2 bits (234), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 28/70 (40%), Positives = 39/70 (55%)

Query: 43  RNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGA 102
              +  D TAHAE+ AIR  C+ L +  L + ++Y + EPC MC  A+ L+RI+RL YGA
Sbjct: 1   MVLKHTDPTAHAEVTAIREACKKLGKIELSDCEIYASCEPCPMCFGAVHLSRIKRLVYGA 60

Query: 103 SNPKGGGIEN 112
                  I  
Sbjct: 61  KAEAAIAIGF 70


>gi|153209016|ref|ZP_01947210.1| riboflavin biosynthesis protein RibD [Coxiella burnetii 'MSU Goat
           Q177']
 gi|165920291|ref|ZP_02219563.1| riboflavin biosynthesis protein RibD [Coxiella burnetii RSA 334]
 gi|212219122|ref|YP_002305909.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Coxiella
           burnetii CbuK_Q154]
 gi|120575553|gb|EAX32177.1| riboflavin biosynthesis protein RibD [Coxiella burnetii 'MSU Goat
           Q177']
 gi|165916847|gb|EDR35451.1| riboflavin biosynthesis protein RibD [Coxiella burnetii RSA 334]
 gi|212013384|gb|ACJ20764.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Coxiella
           burnetii CbuK_Q154]
          Length = 354

 Score = 94.2 bits (234), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 34/125 (27%), Positives = 49/125 (39%), Gaps = 17/125 (13%)

Query: 7   FMSCALEEA--QNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           ++  AL  A  +         VGAV V ++KIIS   ++         HAE+ AI+    
Sbjct: 8   YLKKALSLAEIRRGFCAPNPSVGAVVVKDDKIISTGFHKR----SGLPHAEVEAIKSLGD 63

Query: 65  ILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
                      LYVTLEPC        C   I  + I+ +YYG  +P       G +   
Sbjct: 64  KA-----RGAALYVTLEPCCHFGKTPPCTDLIIQSGIKAVYYGLHDPNLAVCGKGIEQLQ 118

Query: 119 LATCH 123
            A  +
Sbjct: 119 RAGVN 123


>gi|324520795|gb|ADY47713.1| tRNA-specific adenosine deaminase-like protein 3 [Ascaris suum]
          Length = 297

 Score = 94.2 bits (234), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 33/122 (27%), Positives = 55/122 (45%), Gaps = 12/122 (9%)

Query: 16  QNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGC---RILSQEIL 71
           + A        G V V  +  I + +G R R       HA + A+   C   RI   +I+
Sbjct: 174 RKAEKIGNGDAGCVIVDLDGNIAAESGVRPR----PLGHAVMSAVEDLCESHRIQGSDIV 229

Query: 72  ----PEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
                  D+Y+T EPC+MCA A+   R+ R+++G  N  GG +E+  +       +H   
Sbjct: 230 QYLGTGFDVYLTHEPCSMCAMALVHFRVGRVFFGKRNANGGALESSWRIQEEKRINHHYR 289

Query: 128 IY 129
           ++
Sbjct: 290 VF 291


>gi|148242850|ref|YP_001228007.1| riboflavin biosynthesis protein ribD
           (diaminohydroxyphosphoribosylaminopyrimidine deaminase /
           5-amino-6-(5-phosphoribosylamino)uracil reductase)
           [Synechococcus sp. RCC307]
 gi|147851160|emb|CAK28654.1| Riboflavin biosynthesis protein ribD
           (Diaminohydroxyphosphoribosylaminopyrimidine deaminase /
           5-amino-6-(5-phosphoribosylamino)uracil reductase)
           [Synechococcus sp. RCC307]
          Length = 366

 Score = 94.2 bits (234), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 31/131 (23%), Positives = 51/131 (38%), Gaps = 20/131 (15%)

Query: 26  VGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC- 83
           VG V +  N +++    +R         HAE++A+R        +      LYVTLEPC 
Sbjct: 33  VGCVVLDANGELVGEGYHRQAGE----PHAEVMALRRAG-----DRAKGGTLYVTLEPCC 83

Query: 84  -----TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSR 138
                  C+ A+  A +RR+    ++P       G      A      E+  G+ +  + 
Sbjct: 84  HHGRTPPCSEAVIAAGLRRVVIALADPDPRVAGGGIAQLKAAG----MEVISGVRQAEAA 139

Query: 139 QIIQDFFKERR 149
           Q  + F    R
Sbjct: 140 QQNRAFLHRIR 150


>gi|167586436|ref|ZP_02378824.1| riboflavin biosynthesis protein RibD [Burkholderia ubonensis Bu]
          Length = 257

 Score = 94.2 bits (234), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 33/154 (21%), Positives = 52/154 (33%), Gaps = 20/154 (12%)

Query: 1   MKKGNVF--MSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56
           M     F  M  AL  A          P VG V V +  +I     +         HAE+
Sbjct: 1   MFSDTDFAHMQRALALAARGMYTTTPNPRVGCVIVKDGDVIGEGFTQPAGQD----HAEV 56

Query: 57  LAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGI 110
            A++          +    +YVTLEPC        CA A+  AR+ ++     +P     
Sbjct: 57  QALKDA--RSRGHDVAGSTVYVTLEPCSHFGRTPPCANALIDARVAKVVAAMEDPNPQVS 114

Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
             G      A      ++  G+    + ++   F
Sbjct: 115 GRGLGMLRDAG----IDVRCGLLAHEAGELNIGF 144


>gi|75907679|ref|YP_321975.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Anabaena variabilis ATCC 29413]
 gi|75701404|gb|ABA21080.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Anabaena variabilis ATCC 29413]
          Length = 396

 Score = 94.2 bits (234), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 34/145 (23%), Positives = 55/145 (37%), Gaps = 21/145 (14%)

Query: 8   MSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M   LE A+ A  R    P VGAV V + +I+    +          HAE+ A+R    +
Sbjct: 42  MQRCLELARRALGRTSPNPLVGAVVVKDGEIVGEGFHPRAGE----PHAEVFALRAAGEL 97

Query: 66  LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
                     +YV LEPC        C+  +  A + ++  G  +P       G +    
Sbjct: 98  A-----RGATVYVNLEPCNHYGRTPPCSEGLIAAGVAKVVVGMVDPNPLVGGGGIERLRG 152

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDF 144
           A      E+  G+     +Q+ + F
Sbjct: 153 AG----VEVLVGVEMAACQQLNEGF 173


>gi|161830583|ref|YP_001596568.1| riboflavin biosynthesis protein RibD [Coxiella burnetii RSA 331]
 gi|161762450|gb|ABX78092.1| riboflavin biosynthesis protein RibD [Coxiella burnetii RSA 331]
          Length = 354

 Score = 94.2 bits (234), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 34/125 (27%), Positives = 49/125 (39%), Gaps = 17/125 (13%)

Query: 7   FMSCALEEA--QNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           ++  AL  A  +         VGAV V ++KIIS   ++         HAE+ AI+    
Sbjct: 8   YLKKALSLAEIRRGFCAPNPSVGAVVVKDDKIISTGFHKR----SGLPHAEVEAIKSLGD 63

Query: 65  ILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
                      LYVTLEPC        C   I  + I+ +YYG  +P       G +   
Sbjct: 64  KA-----RGAALYVTLEPCCHFGKTPPCTDLIIQSGIKDVYYGLHDPNLAVCGKGIEQLQ 118

Query: 119 LATCH 123
            A  +
Sbjct: 119 RAGVN 123


>gi|319898992|ref|YP_004159085.1| Riboflavin biosynthesis protein ribD [Bartonella clarridgeiae 73]
 gi|319402956|emb|CBI76507.1| Riboflavin biosynthesis protein ribD [Bartonella clarridgeiae 73]
          Length = 374

 Score = 94.2 bits (234), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 34/154 (22%), Positives = 56/154 (36%), Gaps = 25/154 (16%)

Query: 3   KGNVFMSCALEEAQNAA-LRNEIP-VGAVAVLNNK----IISRAGNRNRELKDVTAHAEI 56
           +   FM+ A+  A+    L  + P VGA+ V NN+    I+               HAE+
Sbjct: 6   QDKRFMAAAIRLAERHINLTGKNPSVGALIVKNNETDASIVGYG----VTAVQGRPHAEV 61

Query: 57  LAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGI 110
            A+ M   +           Y+TLEPC        C  A+  A I R+     +P     
Sbjct: 62  QALLMAGPLAY-----GATAYITLEPCSHYGKTPPCVNALIDAGIARVVIALPDPDQRVY 116

Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
             G      A      E+  G+  + + + +  +
Sbjct: 117 GRGIALLRSAG----IEVVEGVLAEEAFETLSAY 146


>gi|206561395|ref|YP_002232160.1| multifunctional diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Burkholderia cenocepacia J2315]
 gi|198037437|emb|CAR53372.1| multifunctional riboflavin biosynthetic protein [includes:
           diaminohydroxyphosphoribosylaminopyrimidine deaminase;
           5-amino-6-(5-phosphoribosylamino)uracil reductase]
           [Burkholderia cenocepacia J2315]
          Length = 373

 Score = 94.2 bits (234), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 33/154 (21%), Positives = 52/154 (33%), Gaps = 20/154 (12%)

Query: 1   MKKGNVF--MSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56
           M     F  M  AL  A          P VG V V +  +I     +         HAE+
Sbjct: 1   MFSDTDFAHMQRALALAARGMYTTAPNPRVGCVIVKDGDVIGEGFTQPAGQD----HAEV 56

Query: 57  LAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGI 110
            A++          +    +YVTLEPC        CA A+  AR+ ++     +P     
Sbjct: 57  QALKDA--RSRGYDVAGSTVYVTLEPCSHFGRTPPCANALIDARVAKVVAAMEDPNPQVS 114

Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
             G      A      ++  G+    + ++   F
Sbjct: 115 GRGLGMLRDAG----IDVRCGLLAHEAGELNIGF 144


>gi|271965577|ref|YP_003339773.1| cytidine/deoxycytidylate deaminase, zinc-binding region
           [Streptosporangium roseum DSM 43021]
 gi|270508752|gb|ACZ87030.1| cytidine/deoxycytidylate deaminase, zinc-binding region
           [Streptosporangium roseum DSM 43021]
          Length = 159

 Score = 94.2 bits (234), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 30/156 (19%), Positives = 56/156 (35%), Gaps = 17/156 (10%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIR 60
                 +   +E A  A    + P G+V V  +  +++   NR     D T H E    R
Sbjct: 4   DTDLRHLRRCVELATEALEVGDEPFGSVLVAADGTVLAEDHNRV-ASGDRTRHPEFELAR 62

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
                ++        +Y + E C MCAAA     + R+ Y +S+ +   + +      + 
Sbjct: 63  WAAANMTPGDRAAATVYTSGEHCPMCAAAHGWVGLGRIVYASSSEQ---LSSWLAELGVP 119

Query: 121 TCHHSP----EIYPGI--------SEQRSRQIIQDF 144
                     E+ PG+          ++ R + + F
Sbjct: 120 APPVRTLPIREVVPGLVVEGPVPGLAEQVRDLHRRF 155


>gi|251790670|ref|YP_003005391.1| riboflavin biosynthesis protein RibD [Dickeya zeae Ech1591]
 gi|247539291|gb|ACT07912.1| riboflavin biosynthesis protein RibD [Dickeya zeae Ech1591]
          Length = 370

 Score = 94.2 bits (234), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 37/155 (23%), Positives = 59/155 (38%), Gaps = 21/155 (13%)

Query: 3   KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
               +M+ ALE A+         P VG V V + +I+    ++         HAE+ A+R
Sbjct: 5   SDEFYMARALELARRGRFTTAPNPNVGCVIVRDGEIVGEGYHQKAGE----PHAEVHALR 60

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           M               YVTLEPC        CA A+  A + R+     +P       G 
Sbjct: 61  MAGDKAH-----GATAYVTLEPCSHHGRTPPCADALVAAGVARVVAAMQDPNPQVAGRGL 115

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
                A       ++ G+  +++ +I + F K  R
Sbjct: 116 HRLQQAG----IAVHHGVLMEQAEKINRGFLKRMR 146


>gi|320164019|gb|EFW40918.1| tRNA-specific adenosine deaminase 2 [Capsaspora owczarzaki ATCC
          30864]
          Length = 307

 Score = 93.8 bits (233), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 26/64 (40%), Positives = 32/64 (50%), Gaps = 2/64 (3%)

Query: 4  GNVFMSCALEEAQNAALRNEIPVGAVAVL--NNKIISRAGNRNRELKDVTAHAEILAIRM 61
             FM  AL++A  A    E+PVG V VL    ++I R  NR  E K+ T HAE  AI  
Sbjct: 18 HERFMQSALDKAYEALEVGEVPVGCVIVLRETGQVIGRGCNRTNETKNATRHAEFEAIDE 77

Query: 62 GCRI 65
            R 
Sbjct: 78 VLRW 81



 Score = 88.0 bits (218), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 34/125 (27%), Positives = 53/125 (42%), Gaps = 17/125 (13%)

Query: 39  RAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98
           RAG+ +         +  L+ R      S +I    DLYVT+EPC MCAAA+ L  I  +
Sbjct: 162 RAGSLSASPHSPPTLSLFLSERATSVATSTQIFQHCDLYVTVEPCVMCAAALRLVGIGAV 221

Query: 99  YYGASNPKGGGIENGTQFY----------------TLATCHHSP-EIYPGISEQRSRQII 141
           YYG  N + GG  +    +                     +  P     GI   ++ Q++
Sbjct: 222 YYGCGNDRFGGCGSVLDIHSEMHRRASSDDASAGAADPNRNSRPFRCISGIMRLQAIQLL 281

Query: 142 QDFFK 146
           +DF++
Sbjct: 282 RDFYQ 286


>gi|239816083|ref|YP_002944993.1| riboflavin biosynthesis protein RibD [Variovorax paradoxus S110]
 gi|239802660|gb|ACS19727.1| riboflavin biosynthesis protein RibD [Variovorax paradoxus S110]
          Length = 375

 Score = 93.8 bits (233), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 39/150 (26%), Positives = 65/150 (43%), Gaps = 19/150 (12%)

Query: 7   FMSCALEEAQNAA-LRNEIP-VGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
           FM+ AL+ A+ A    +  P VG V V  N  +I +   R +++     HAE++A+R   
Sbjct: 10  FMAQALDLARQAGPETDPNPRVGCVLVDANGAVIGQG--RTQQVGGP--HAEVMALRDAA 65

Query: 64  RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFY 117
                  +     +VTLEPC        C  A++ A I R+    ++P       G +  
Sbjct: 66  ARGHS--VAGATAFVTLEPCAHHGRTGPCCDALAAAGIGRVVASLADPNPLVAGKGFERL 123

Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
             A    + E+ PG   + +R++   FF  
Sbjct: 124 RAAGV--AVEVGPG--AEEARELNIGFFSR 149


>gi|84394363|ref|ZP_00993084.1| Pyrimidine reductase, riboflavin biosynthesis [Vibrio splendidus
           12B01]
 gi|84375022|gb|EAP91948.1| Pyrimidine reductase, riboflavin biosynthesis [Vibrio splendidus
           12B01]
          Length = 364

 Score = 93.8 bits (233), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 35/149 (23%), Positives = 55/149 (36%), Gaps = 22/149 (14%)

Query: 8   MSCALEEAQNA-ALRNEIP-VGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           MS A++ A+         P VG V V  + +I+    +          HAE+ A+RM   
Sbjct: 2   MSRAIQLAKRGIYTTAPNPNVGCVIVQTDGQIVGEGFHAKAGE----PHAEVHAMRMAGD 57

Query: 65  ILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
                       YVTLEPC        CA  +  A++ ++     +P       G +   
Sbjct: 58  KA-----KGATAYVTLEPCSHYGRTPPCAEGLIKAQVAKVICAMQDPNPKVAGRGIKMLR 112

Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKE 147
            A      E+  G+ EQ +  +   F K 
Sbjct: 113 DAG----IEVEIGLLEQDALDLNPAFIKR 137


>gi|256379414|ref|YP_003103074.1| CMP/dCMP deaminase zinc-binding [Actinosynnema mirum DSM 43827]
 gi|255923717|gb|ACU39228.1| CMP/dCMP deaminase zinc-binding [Actinosynnema mirum DSM 43827]
          Length = 158

 Score = 93.8 bits (233), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 27/142 (19%), Positives = 51/142 (35%), Gaps = 13/142 (9%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           ++ A+ EA+       +P+GA     + ++     NR  +  D + HAE           
Sbjct: 16  LAVAVAEARAGLAEGGVPIGAALFGPDGRLWGSGRNRRVQDDDASTHAETA---AFRAAG 72

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
            +       +  TL PC  C+  +    I R+  G +    GG +   +        H  
Sbjct: 73  RRAGYRGTTMVTTLSPCWYCSGLVRQFGISRVVIGEARTFSGGHDWLAE--------HGV 124

Query: 127 EIYPGISEQRSRQIIQDFFKER 148
           EI   + +    +++  F   R
Sbjct: 125 EIVL-VDDAECAELMTAFVAAR 145


>gi|313835935|gb|EFS73649.1| riboflavin biosynthesis protein RibD [Propionibacterium acnes
           HL037PA2]
 gi|314970655|gb|EFT14753.1| riboflavin biosynthesis protein RibD [Propionibacterium acnes
           HL037PA3]
 gi|328906122|gb|EGG25897.1| riboflavin biosynthesis protein RibD [Propionibacterium sp. P08]
          Length = 331

 Score = 93.8 bits (233), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 36/144 (25%), Positives = 57/144 (39%), Gaps = 21/144 (14%)

Query: 8   MSCALEEAQNAALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M+ AL  A  +   +  P VG V V + ++I +  +R       T HAEI A+R      
Sbjct: 9   MTLALNMAGKSPCPDPNPRVGCVIVADERVIGQGWHR----GAGTPHAEIEALRQAG--- 61

Query: 67  SQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
             +        VTLEPC        C+ A+  A I R+     +P       G Q+    
Sbjct: 62  --DGARGATAVVTLEPCNHTGRTGPCSHALLDAGITRVVIAQPDPNPAASG-GEQWLRA- 117

Query: 121 TCHHSPEIYPGISEQRSRQIIQDF 144
              H  E   G+  +++  +  D+
Sbjct: 118 ---HGVEAVTGVLGEKATTLNADW 138


>gi|148976617|ref|ZP_01813304.1| riboflavin-specific deaminase [Vibrionales bacterium SWAT-3]
 gi|145963968|gb|EDK29226.1| riboflavin-specific deaminase [Vibrionales bacterium SWAT-3]
          Length = 367

 Score = 93.8 bits (233), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 35/149 (23%), Positives = 55/149 (36%), Gaps = 22/149 (14%)

Query: 8   MSCALEEAQNA-ALRNEIP-VGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           MS A+  A+         P VG V V  + +I+    +          HAE+ A+RM   
Sbjct: 12  MSRAIHLAKRGIYTTAPNPNVGCVIVQTDGQIVGEGFHAKAGE----PHAEVHAMRMAGD 67

Query: 65  ILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
                      +YVTLEPC        CA  +  A++ ++     +P       G +   
Sbjct: 68  KA-----KGATVYVTLEPCSHYGRTPPCAEGLIKAQVAKVICAMQDPNPKVAGRGIKMLR 122

Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKE 147
            A      E+  G+ EQ +  +   F K 
Sbjct: 123 DAG----IEVEIGLLEQDALDLNPAFIKR 147


>gi|238026457|ref|YP_002910688.1| Pyrimidine reductase, riboflavin biosynthesis [Burkholderia glumae
           BGR1]
 gi|237875651|gb|ACR27984.1| Pyrimidine reductase, riboflavin biosynthesis [Burkholderia glumae
           BGR1]
          Length = 372

 Score = 93.8 bits (233), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 35/154 (22%), Positives = 53/154 (34%), Gaps = 20/154 (12%)

Query: 1   MKKGNVF--MSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56
           M     F  M  AL+ +          P VG V V +  +I     +         HAE+
Sbjct: 1   MFSDTDFAHMQRALDLSSRGMYTTTPNPRVGCVIVKDGVVIGEGYTQPAGQD----HAEV 56

Query: 57  LAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGI 110
            A++          L    +YVTLEPC        CA  +  AR+ R+     +P     
Sbjct: 57  QAMKDA--RSRGHDLRGATVYVTLEPCSHFGRTPPCAQGLIDARVARVIAAMEDPNPAVS 114

Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
             G      A      E+  G+  Q + ++   F
Sbjct: 115 GRGLAMLRDAG----IEVRCGLLAQEAHEMNIGF 144


>gi|314927222|gb|EFS91053.1| riboflavin biosynthesis protein RibD [Propionibacterium acnes
           HL044PA1]
          Length = 331

 Score = 93.8 bits (233), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 36/144 (25%), Positives = 57/144 (39%), Gaps = 21/144 (14%)

Query: 8   MSCALEEAQNAALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M+ AL  A  +   +  P VG V V + ++I +  +R       T HAEI A+R      
Sbjct: 9   MTLALNMAGKSPCPDPNPRVGCVIVADERVIGQGWHR----GAGTPHAEIEALRQAG--- 61

Query: 67  SQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
             +        VTLEPC        C+ A+  A I R+     +P       G Q+    
Sbjct: 62  --DGARGATAVVTLEPCNHTGRTGPCSHALLDAGITRVVIAQPDPNPAASG-GEQWLRA- 117

Query: 121 TCHHSPEIYPGISEQRSRQIIQDF 144
              H  E   G+  +++  +  D+
Sbjct: 118 ---HGVEAVTGVLGEKATTLNADW 138


>gi|294083733|ref|YP_003550490.1| bifunctional deaminase-reductase [Candidatus Puniceispirillum
           marinum IMCC1322]
 gi|292663305|gb|ADE38406.1| bifunctional deaminase-reductase [Candidatus Puniceispirillum
           marinum IMCC1322]
          Length = 366

 Score = 93.8 bits (233), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 35/146 (23%), Positives = 52/146 (35%), Gaps = 22/146 (15%)

Query: 8   MSCALEEAQNA--ALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           M  A+ EA+ A        PVG V +  + ++I               HAE +A+ M  +
Sbjct: 1   MRYAISEARKAVGRAAENPPVGCVIIAASGQLIGAGH--TARTGRP--HAETVALAMAGQ 56

Query: 65  ILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
                       YVTLEPC        CA A+  A IRR+     +P       G     
Sbjct: 57  -----RAHGGTAYVTLEPCAHHGQTPPCATALIEAGIRRVVIACQDPDRRVNGKGVTMLR 111

Query: 119 LATCHHSPEIYPGISEQRSRQIIQDF 144
            A      ++   I    +  ++Q F
Sbjct: 112 AAG----IDVITDIGSDMAYSVMQGF 133


>gi|87125464|ref|ZP_01081309.1| putative Diaminohydroxyphosphoribosylaminopyrimidine deaminase
           and5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Synechococcus sp. RS9917]
 gi|86166764|gb|EAQ68026.1| putative Diaminohydroxyphosphoribosylaminopyrimidine deaminase
           and5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Synechococcus sp. RS9917]
          Length = 369

 Score = 93.8 bits (233), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 36/155 (23%), Positives = 58/155 (37%), Gaps = 26/155 (16%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEI---P-VGAVAVL-NNKIISRAGNRNRELKDVTAHAE 55
           +++   +M  AL+ A  A +  +    P VGAV +  +  ++    +          HAE
Sbjct: 3   IERWIPWMRRALQLA--ALVEGQTSPNPLVGAVVLDAHGTLVGEGYHARAGK----PHAE 56

Query: 56  ILAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGG 109
           + A+                L VTLEPC        C  A+  A IRR+    ++P    
Sbjct: 57  VGALVQAGEAA-----RGGTLVVTLEPCCHHGRTPPCVEAVIAAGIRRVVVALTDPDPRM 111

Query: 110 IENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
              G Q    A      E+ PG+ E  +    + F
Sbjct: 112 AGGGLQRLRDAGL----EVIPGVLEAEAAHQNRAF 142


>gi|312195390|ref|YP_004015451.1| CMP/dCMP deaminase zinc-binding protein [Frankia sp. EuI1c]
 gi|311226726|gb|ADP79581.1| CMP/dCMP deaminase zinc-binding protein [Frankia sp. EuI1c]
          Length = 154

 Score = 93.8 bits (233), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 32/121 (26%), Positives = 43/121 (35%), Gaps = 4/121 (3%)

Query: 22  NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81
            + P GAV V  +       NR     D TAHAE +AIR+  +      L    +  + E
Sbjct: 23  GDNPYGAVLVTADGQAVEERNRVVTTSDPTAHAESMAIRVAAKTWGI-DLSGATMVASFE 81

Query: 82  PCTMCAAAISLARIRRLYYGASN---PKGGGIENGTQFYTLATCHHSPEIYPGISEQRSR 138
           PC MC  AI  A I  L  G          G         L    H+ ++  G     + 
Sbjct: 82  PCPMCCGAILEAGITVLAIGQRRTVGEAPLGRYTVENLLELVDRPHALQVVTGEFGDEAA 141

Query: 139 Q 139
            
Sbjct: 142 A 142


>gi|209527094|ref|ZP_03275608.1| riboflavin biosynthesis protein RibD [Arthrospira maxima CS-328]
 gi|209492434|gb|EDZ92775.1| riboflavin biosynthesis protein RibD [Arthrospira maxima CS-328]
          Length = 388

 Score = 93.8 bits (233), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 33/149 (22%), Positives = 52/149 (34%), Gaps = 21/149 (14%)

Query: 4   GNVFMSCALEEAQNAA-LRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
               M   L  A+         P VG V V +++II    +          HAEI A+R 
Sbjct: 13  DRQMMRNCLNLAKEGLGKTAPNPLVGCVIVRDDQIIGEGFH----PGPGQPHAEIFALRS 68

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
              +          +YV LEPC        C+ A+  A + ++  G  +P       G  
Sbjct: 69  AGELA-----RGATVYVNLEPCNHYGRTPPCSEALIKAGVAKVVAGMVDPNPLVGGQGIA 123

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDF 144
               A      E+  G+ E    ++ + F
Sbjct: 124 KLRQAG----IEVIVGVEESACLKLNEAF 148


>gi|284043456|ref|YP_003393796.1| CMP/dCMP deaminase zinc-binding protein [Conexibacter woesei DSM
           14684]
 gi|283947677|gb|ADB50421.1| CMP/dCMP deaminase zinc-binding protein [Conexibacter woesei DSM
           14684]
          Length = 158

 Score = 93.4 bits (232), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 33/145 (22%), Positives = 57/145 (39%), Gaps = 8/145 (5%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKII-SRAGNRNRELKDVTAHAEILAIRM 61
           +   ++  A+  +Q A    + P GA+ V    ++ ++  N     +DV+AH E+     
Sbjct: 7   RDVHWLRMAIALSQQARAAGDEPFGALLVGAGGVLLAQERNSVVTDRDVSAHPELKLAVW 66

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS----NPKGGGIENGTQFY 117
             R L  E+     +Y + E C MCAAA+  A +  L Y  S        G         
Sbjct: 67  AGRNLDPEVARLTTMYTSCENCAMCAAAMVWANLGTLVYSLSGTSLTELQGPRHTTMTIR 126

Query: 118 TLATCHHS---PEIYPGISEQRSRQ 139
                 H+    E+   + E+ +R 
Sbjct: 127 AREIFLHTSRPVEVRGPLIEEEARA 151


>gi|89897925|ref|YP_515035.1| riboflavin biosynthesis protein [Chlamydophila felis Fe/C-56]
 gi|89331297|dbj|BAE80890.1| riboflavin biosynthesis protein [Chlamydophila felis Fe/C-56]
          Length = 377

 Score = 93.4 bits (232), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 35/156 (22%), Positives = 62/156 (39%), Gaps = 23/156 (14%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           ++   FM  A+E  +N  L    P   VG V V N +II    ++  +      HAE  A
Sbjct: 6   EQQLFFMRRAIELGENGRLSA-PPNPWVGCVIVKNGRIIGEGYHK--KKGQP--HAEEEA 60

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
           +       + E +   D+YVTLEPC        C   +   ++  +Y    +P G     
Sbjct: 61  VNS-----TTESIEGCDVYVTLEPCCHYGSTPPCVNLLIKHKVSTVYVALLDPDGRVSGK 115

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKER 148
           G         +    +Y G+ ++ +   ++ +  +R
Sbjct: 116 GIAALR----NAGIRVYVGLGKEEAESSLKSYIYQR 147


>gi|167619029|ref|ZP_02387660.1| riboflavin biosynthesis protein RibD [Burkholderia thailandensis
           Bt4]
          Length = 306

 Score = 93.4 bits (232), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 33/151 (21%), Positives = 54/151 (35%), Gaps = 18/151 (11%)

Query: 2   KKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
           +     M  AL  A          P VG V V ++ +I     +         HAE+ A+
Sbjct: 4   ENDFTHMQRALALAARGMYTTTPNPRVGCVIVKDDVVIGEGFTQPAGQD----HAEVQAL 59

Query: 60  RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113
           +   R      L +  +YVTLEPC        CA A+  AR+ ++     +P       G
Sbjct: 60  KDA-RARGN-DLRDATVYVTLEPCSHFGRTPPCAHALIDARVGKVVAAMEDPNPQVSGRG 117

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
                 A      ++  G+    + ++   F
Sbjct: 118 LAMLRDAG----IDVRCGLLAHEAHEMNIGF 144


>gi|154706505|ref|YP_001424060.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Coxiella
           burnetii Dugway 5J108-111]
 gi|154355791|gb|ABS77253.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Coxiella
           burnetii Dugway 5J108-111]
          Length = 354

 Score = 93.4 bits (232), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 34/125 (27%), Positives = 49/125 (39%), Gaps = 17/125 (13%)

Query: 7   FMSCALEEA--QNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           ++  AL  A  +         VGAV V ++KIIS   ++         HAE+ AI     
Sbjct: 8   YLKKALSLAEIRRGFCAPNPSVGAVVVKDDKIISTGFHKR----SGLPHAEVEAI----- 58

Query: 65  ILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
               +      LYVTLEPC        C   I  + I+ +YYG  +P       G +   
Sbjct: 59  KSLDDKARGAALYVTLEPCCHFGKTPPCTDLIIQSGIKAVYYGLHDPNLAVCGKGIEQLQ 118

Query: 119 LATCH 123
            A  +
Sbjct: 119 RAGVN 123


>gi|170703035|ref|ZP_02893863.1| riboflavin biosynthesis protein RibD [Burkholderia ambifaria
           IOP40-10]
 gi|170132059|gb|EDT00559.1| riboflavin biosynthesis protein RibD [Burkholderia ambifaria
           IOP40-10]
          Length = 373

 Score = 93.4 bits (232), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 33/154 (21%), Positives = 52/154 (33%), Gaps = 20/154 (12%)

Query: 1   MKKGNVF--MSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56
           M     F  M  AL  A          P VG V V +  +I     +         HAE+
Sbjct: 1   MFSDTDFAHMQRALTLAARGMYTTAPNPRVGCVIVKDGNVIGEGFTQPAGQD----HAEV 56

Query: 57  LAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGI 110
            A++          +    +YVTLEPC        CA A+  AR+ ++     +P     
Sbjct: 57  QALKDA--RARGHDVAGSTVYVTLEPCSHFGRTPPCANALIDARVAKVVAAMEDPNPQVS 114

Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
             G      A      ++  G+    + ++   F
Sbjct: 115 GRGLGMLRDAG----IDVRCGLLANEAGELNIGF 144


>gi|296136861|ref|YP_003644103.1| riboflavin biosynthesis protein RibD [Thiomonas intermedia K12]
 gi|295796983|gb|ADG31773.1| riboflavin biosynthesis protein RibD [Thiomonas intermedia K12]
          Length = 366

 Score = 93.4 bits (232), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 35/154 (22%), Positives = 57/154 (37%), Gaps = 18/154 (11%)

Query: 2   KKGNVFMSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
           ++   FM  AL+ A +A  R    P VG V V + +++         L     HAE+ A+
Sbjct: 10  EQDQRFMRRALDLAHSAMYRTSPNPRVGCVLVRDGQVLGEGA----TLAAGQDHAEVQAV 65

Query: 60  RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113
           +       +        YVTLEPC        CA  ++   + R+     +P       G
Sbjct: 66  KQAWERGHEVR--GATTYVTLEPCAHHGRTPPCADLLATQGVARVVAALVDPNPLVAGQG 123

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
            Q    A      ++  G+    +R+I   F   
Sbjct: 124 LQRLRDAG----IQVDVGLFADEAREINLGFISR 153


>gi|289427738|ref|ZP_06429450.1| riboflavin biosynthesis protein RibD [Propionibacterium acnes J165]
 gi|289159229|gb|EFD07421.1| riboflavin biosynthesis protein RibD [Propionibacterium acnes J165]
 gi|313808724|gb|EFS47178.1| riboflavin biosynthesis protein RibD [Propionibacterium acnes
           HL087PA2]
 gi|313817904|gb|EFS55618.1| riboflavin biosynthesis protein RibD [Propionibacterium acnes
           HL046PA2]
 gi|313819816|gb|EFS57530.1| riboflavin biosynthesis protein RibD [Propionibacterium acnes
           HL036PA1]
 gi|313823306|gb|EFS61020.1| riboflavin biosynthesis protein RibD [Propionibacterium acnes
           HL036PA2]
 gi|313824948|gb|EFS62662.1| riboflavin biosynthesis protein RibD [Propionibacterium acnes
           HL063PA1]
 gi|314925876|gb|EFS89707.1| riboflavin biosynthesis protein RibD [Propionibacterium acnes
           HL036PA3]
 gi|314960753|gb|EFT04854.1| riboflavin biosynthesis protein RibD [Propionibacterium acnes
           HL002PA2]
 gi|314979409|gb|EFT23503.1| riboflavin biosynthesis protein RibD [Propionibacterium acnes
           HL072PA2]
 gi|314986170|gb|EFT30262.1| riboflavin biosynthesis protein RibD [Propionibacterium acnes
           HL005PA2]
 gi|314988782|gb|EFT32873.1| riboflavin biosynthesis protein RibD [Propionibacterium acnes
           HL005PA3]
 gi|315083284|gb|EFT55260.1| riboflavin biosynthesis protein RibD [Propionibacterium acnes
           HL027PA2]
 gi|315086943|gb|EFT58919.1| riboflavin biosynthesis protein RibD [Propionibacterium acnes
           HL002PA3]
 gi|315089869|gb|EFT61845.1| riboflavin biosynthesis protein RibD [Propionibacterium acnes
           HL072PA1]
 gi|327325060|gb|EGE66866.1| riboflavin biosynthesis protein RibD [Propionibacterium acnes
           HL096PA3]
 gi|327449258|gb|EGE95912.1| riboflavin biosynthesis protein RibD [Propionibacterium acnes
           HL013PA2]
 gi|328756397|gb|EGF70013.1| riboflavin biosynthesis protein RibD [Propionibacterium acnes
           HL020PA1]
          Length = 331

 Score = 93.4 bits (232), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 30/125 (24%), Positives = 49/125 (39%), Gaps = 20/125 (16%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85
           VG V V  +++I +  +R       T HAE+ A+R        + +      VTLEPC  
Sbjct: 28  VGCVIVAEDRVIGQGWHR----GAGTPHAEVEALRQAG-----DDVRGATAVVTLEPCHH 78

Query: 86  ------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139
                 C+ A+  A I R+    S+P            T     H  E+  G+  + +  
Sbjct: 79  TGRTGPCSHALVDAGIARVVIAQSDPNPVASGGEQWLRT-----HGVEVVTGVLSEEATA 133

Query: 140 IIQDF 144
           +  D+
Sbjct: 134 LNADW 138


>gi|284107199|ref|ZP_06386340.1| riboflavin biosynthesis protein RibD [Candidatus Poribacteria sp.
           WGA-A3]
 gi|283829946|gb|EFC34225.1| riboflavin biosynthesis protein RibD [Candidatus Poribacteria sp.
           WGA-A3]
          Length = 362

 Score = 93.4 bits (232), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 29/122 (23%), Positives = 45/122 (36%), Gaps = 20/122 (16%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC-- 83
           VGAV V +  ++    +R         HAEI+A+R       +       LY TLEPC  
Sbjct: 2   VGAVIVADGAVVGAGYHRRAGG----PHAEIVALRQA-----RTRSRGATLYTTLEPCCH 52

Query: 84  -----TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSR 138
                  C  AI  + +RR+     +P       G +    A       +  G   + + 
Sbjct: 53  TNKRTPPCVPAILASGVRRIVLAMRDPNVQVAGRGIRQLRRAGL----SVDVGCLGKEAA 108

Query: 139 QI 140
           Q+
Sbjct: 109 QL 110


>gi|254469111|ref|ZP_05082516.1| riboflavin biosynthesis protein RibD [Pseudovibrio sp. JE062]
 gi|211960946|gb|EEA96141.1| riboflavin biosynthesis protein RibD [Pseudovibrio sp. JE062]
          Length = 381

 Score = 93.4 bits (232), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 38/149 (25%), Positives = 58/149 (38%), Gaps = 25/149 (16%)

Query: 3   KGNVFMSCALEEAQNAALRN--EIPVGAVAVLN--NK--IISRAGNRNRELKDVTAHAEI 56
           +   FM+ AL     A  R     PVGA+   +  +   I+ +            +HAE+
Sbjct: 14  EHERFMAAALSYGIRAKGRTWPNPPVGAILTKDFGDGPVIVGQGATLPPGG----SHAEV 69

Query: 57  LAIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGI 110
           LAI+        E       YVTLEPC        CA A+  A + R+ YG ++P     
Sbjct: 70  LAIKDAG-----EHAKGATAYVTLEPCAHYGRTGPCARALVAAGVSRVVYGTADPNPAVA 124

Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQ 139
             G +           E+  G+ E+  R+
Sbjct: 125 GRGKKILEEGG----VEVLIGVLEKECRE 149


>gi|83718892|ref|YP_442086.1| riboflavin biosynthesis protein RibD [Burkholderia thailandensis
           E264]
 gi|83652717|gb|ABC36780.1| riboflavin biosynthesis protein RibD [Burkholderia thailandensis
           E264]
          Length = 378

 Score = 93.4 bits (232), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 33/151 (21%), Positives = 54/151 (35%), Gaps = 18/151 (11%)

Query: 2   KKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
           +     M  AL  A          P VG V V ++ +I     +         HAE+ A+
Sbjct: 4   ENDFTHMQRALALAARGMYTTTPNPRVGCVIVKDDVVIGEGFTQPAGQD----HAEVQAL 59

Query: 60  RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113
           +   R      L +  +YVTLEPC        CA A+  AR+ ++     +P       G
Sbjct: 60  KDA-RARGN-DLRDATVYVTLEPCSHFGRTPPCAHALIDARVGKVVAAMEDPNPQVSGRG 117

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
                 A      ++  G+    + ++   F
Sbjct: 118 LAMLRDAG----IDVRCGLLAHEAHEMNIGF 144


>gi|330445267|ref|ZP_08308919.1| riboflavin biosynthesis protein RibD [Photobacterium leiognathi
           subsp. mandapamensis svers.1.1.]
 gi|328489458|dbj|GAA03416.1| riboflavin biosynthesis protein RibD [Photobacterium leiognathi
           subsp. mandapamensis svers.1.1.]
          Length = 374

 Score = 93.4 bits (232), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 30/151 (19%), Positives = 53/151 (35%), Gaps = 21/151 (13%)

Query: 4   GNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
               M  A++ A+         P VG V     +I+    +          HAE+ A++ 
Sbjct: 6   DTRLMLRAIQLAKRGRFTTAPNPNVGCVIARGEEIVGEGFHYRAGE----PHAEVFALKQ 61

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
              +           YVTLEPC        CA A+  + I ++     +P       G +
Sbjct: 62  AGTLA-----KGATAYVTLEPCSHYGRTPPCAEALIKSGISKVICAMVDPNPMVAGRGVE 116

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
               A      ++  G+ E+ ++ +   F K
Sbjct: 117 MLQKAG----IDVQVGLLEEEAQALNLGFIK 143


>gi|291244537|ref|XP_002742156.1| PREDICTED: tRNA-specific adenosine deaminase 3-like [Saccoglossus
           kowalevskii]
          Length = 381

 Score = 93.4 bits (232), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 1/80 (1%)

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
                  +    DLY+T EPC MCA A+  +RI R++YG   P  G + +  + +T +  
Sbjct: 302 GDKSGPYLCTGYDLYITHEPCIMCAMALVHSRINRVFYGIMCPN-GALGSRYKIHTQSGL 360

Query: 123 HHSPEIYPGISEQRSRQIIQ 142
           +H  E++ GI E    Q+++
Sbjct: 361 NHHFEVFKGILELDCNQLLK 380



 Score = 62.2 bits (151), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 17/79 (21%), Positives = 30/79 (37%), Gaps = 4/79 (5%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVL--NNKIISRAGNRNRELKDVTAHAEILAIR 60
           K   +M  A+  A+    R + P+GAV V   N ++I+   +     +    HA ++ I 
Sbjct: 167 KIQCYMEKAVAVAKTGKERGQAPIGAVIVDPINEEVIAVCHDLRNVGRHPFFHAAMICID 226

Query: 61  --MGCRILSQEILPEVDLY 77
                +        E   Y
Sbjct: 227 LVAASQGGGTYKYNEPGFY 245


>gi|312869208|ref|ZP_07729380.1| riboflavin biosynthesis protein RibD [Lactobacillus oris
           PB013-T2-3]
 gi|311095229|gb|EFQ53501.1| riboflavin biosynthesis protein RibD [Lactobacillus oris
           PB013-T2-3]
          Length = 352

 Score = 93.4 bits (232), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 38/158 (24%), Positives = 56/158 (35%), Gaps = 23/158 (14%)

Query: 3   KGNVFMSCALEEAQNAALR--NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
                M  A+  A+ A +       VGAV V N  +++    +         HAE    R
Sbjct: 2   NDEDLMGLAVAAAKQAGVATWRNPGVGAVVVKNGHVLATGHTQPYGG----PHAE----R 53

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
                L+        LYVTLEPC        C   I  + I+R+     +P       G 
Sbjct: 54  DALSQLAPGQAAGATLYVTLEPCNHYGKQPPCTQLIIDSGIQRVVIAQLDPHALVTGKGV 113

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQD---FFKERR 149
                   HH  E+  GI  Q++ Q+      F++  R
Sbjct: 114 AALR----HHGIEVVTGIGTQQAAQVNPHYNFFYRHHR 147


>gi|271964337|ref|YP_003338533.1| diaminohydroxyphosphoribosylaminopyrimidinedeami nase
           [Streptosporangium roseum DSM 43021]
 gi|270507512|gb|ACZ85790.1| Diaminohydroxyphosphoribosylaminopyrimidinedeami nase
           [Streptosporangium roseum DSM 43021]
          Length = 388

 Score = 93.4 bits (232), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 30/147 (20%), Positives = 49/147 (33%), Gaps = 25/147 (17%)

Query: 3   KGNVFMSCALEEAQNAALR---NEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILA 58
                M  A+E A         N + VG V +    +++    +          HAE++A
Sbjct: 2   TDQAHMRRAIELAARGRGTTSPNPV-VGCVVLDAAGQVVGEGFHAYAGG----PHAEVVA 56

Query: 59  IRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIEN 112
           +R        E       YVTLEPC        CA A+  A I R+     +P       
Sbjct: 57  LRAAG-----ERARGGTAYVTLEPCDHTGRTGPCALALLEAGIARVVVAVRDPNPAAAGG 111

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQ 139
             +        H   +  G+  + + +
Sbjct: 112 ADRLTR-----HGVAVTTGVLAEEAGR 133


>gi|317123798|ref|YP_004097910.1| CMP/dCMP deaminase zinc-binding protein [Intrasporangium calvum DSM
           43043]
 gi|315587886|gb|ADU47183.1| CMP/dCMP deaminase zinc-binding protein [Intrasporangium calvum DSM
           43043]
          Length = 160

 Score = 93.4 bits (232), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 37/156 (23%), Positives = 56/156 (35%), Gaps = 11/156 (7%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRM 61
           +   F+  A+  A+ A  R + P G+V V     ++    NR     D T H E    R 
Sbjct: 6   RDLAFLRRAVGLARLALARGDEPFGSVLVSSEGDVLFEDHNRVVA-IDGTQHPEFAIARW 64

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA- 120
               LS        +Y + E C MC+AA     + R+ Y AS+ + G             
Sbjct: 65  AGSHLSPSERAVATVYTSGEHCPMCSAAHGWVGLGRIAYAASSAQLGAWRAAWGLPDGPV 124

Query: 121 TCHHSPEIYPGI--------SEQRSRQIIQDFFKER 148
                 E+ PG          E   R + + F + R
Sbjct: 125 RALPIREVVPGAVVDGPAPELEDEVRALHEAFARRR 160


>gi|312797040|ref|YP_004029962.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase /
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Burkholderia rhizoxinica HKI 454]
 gi|312168815|emb|CBW75818.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26)
           / 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC
           1.1.1.193) [Burkholderia rhizoxinica HKI 454]
          Length = 382

 Score = 93.4 bits (232), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 31/149 (20%), Positives = 49/149 (32%), Gaps = 18/149 (12%)

Query: 4   GNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
             + M  AL  A+           VG V V + ++I     +         HAEI A++ 
Sbjct: 6   DRLQMQRALVLAERGLYTTSPNPRVGCVLVKDGEVIGEGFTQPAGQD----HAEICALKD 61

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
                          YVTLEPC        CA  +  A I R+     +P       G  
Sbjct: 62  ARLRGHTP--AGATAYVTLEPCSHFGRTPPCANTLIEAGITRVIAAMEDPNPQVSGRGLA 119

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDF 144
               A      ++  G+    ++++   F
Sbjct: 120 SLRDAG----VDVRCGLLAHEAQELNVGF 144


>gi|149276501|ref|ZP_01882645.1| bifunctional protein: diaminohydroxyphosphoribosylaminopyrimidine
           deaminase; 5-amino-6-(5-phosphoribosylamino)uracil
           [Pedobacter sp. BAL39]
 gi|149233021|gb|EDM38396.1| bifunctional protein: diaminohydroxyphosphoribosylaminopyrimidine
           deaminase; 5-amino-6-(5-phosphoribosylamino)uracil
           [Pedobacter sp. BAL39]
          Length = 332

 Score = 93.4 bits (232), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 32/129 (24%), Positives = 47/129 (36%), Gaps = 17/129 (13%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQ---EILPEVDLYVTLEP 82
           VG V V   KII    +         AHAE+ AI             +L +   YV+LEP
Sbjct: 10  VGCVIVSEGKIIGEGYHEQFGA----AHAEVNAINSVWSAYPDQAAALLAQATAYVSLEP 65

Query: 83  C------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQR 136
           C        CA  +   +++++  G  +P       G      A      E+  GI E+ 
Sbjct: 66  CAHFGKTPPCADLLIKNQLQKVVIGNRDPFPDVNGKGIAKLNAAG----IEVISGILEEE 121

Query: 137 SRQIIQDFF 145
              +   FF
Sbjct: 122 CTALNIRFF 130


>gi|330447671|ref|ZP_08311319.1| cytidine and deoxycytidylate deaminase zinc-binding region family
           protein [Photobacterium leiognathi subsp. mandapamensis
           svers.1.1.]
 gi|328491862|dbj|GAA05816.1| cytidine and deoxycytidylate deaminase zinc-binding region family
           protein [Photobacterium leiognathi subsp. mandapamensis
           svers.1.1.]
          Length = 146

 Score = 93.4 bits (232), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 37/142 (26%), Positives = 53/142 (37%), Gaps = 21/142 (14%)

Query: 3   KGNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +   FM  AL  +  A  A R   PVG V V + +I+S    +         HAE +A+ 
Sbjct: 6   QEQAFMMRALLLSHQALPACRPNPPVGCVLVKDGQIVSEGFTQRPGHH----HAEAMAL- 60

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
                   E L +V  YVTLEPC        CA  +    I+++     +P       G 
Sbjct: 61  ----ANYGESLDDVTAYVTLEPCSFVGRTPSCAHTLVERGIKKVVVATLDPDTRNSGKGI 116

Query: 115 QFYTLATCHHSPEIYPGISEQR 136
                A      E+  G+ E  
Sbjct: 117 AVLEQAG----VEVEVGLCENE 134


>gi|167580933|ref|ZP_02373807.1| riboflavin biosynthesis protein RibD [Burkholderia thailandensis
           TXDOH]
          Length = 378

 Score = 93.4 bits (232), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 33/151 (21%), Positives = 54/151 (35%), Gaps = 18/151 (11%)

Query: 2   KKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
           +     M  AL  A          P VG V V ++ +I     +         HAE+ A+
Sbjct: 4   ENDFTHMQRALALAARGMYTTTPNPRVGCVIVKDDVVIGEGFTQPAGQD----HAEVQAL 59

Query: 60  RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113
           +   R      L +  +YVTLEPC        CA A+  AR+ ++     +P       G
Sbjct: 60  KDA-RARGN-DLRDATVYVTLEPCSHFGRTPPCAHALIDARVGKVVAAMEDPNPQVSGRG 117

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
                 A      ++  G+    + ++   F
Sbjct: 118 LAMLRDAG----IDVRCGLLAHEAHEMNIGF 144


>gi|264677369|ref|YP_003277275.1| CMP/dCMP deaminase, zinc-binding protein [Comamonas testosteroni
           CNB-2]
 gi|299533067|ref|ZP_07046453.1| CMP/dCMP deaminase, zinc-binding protein [Comamonas testosteroni
           S44]
 gi|262207881|gb|ACY31979.1| CMP/dCMP deaminase, zinc-binding protein [Comamonas testosteroni
           CNB-2]
 gi|298718952|gb|EFI59923.1| CMP/dCMP deaminase, zinc-binding protein [Comamonas testosteroni
           S44]
          Length = 170

 Score = 93.4 bits (232), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 35/142 (24%), Positives = 52/142 (36%), Gaps = 16/142 (11%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNK--IISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           +  A   AQ A      P GAV V  ++  ++    N      D   HAE    RM    
Sbjct: 22  LRRAQAVAQRATQMGHHPFGAVLVGPDQETVLMEQCN-----IDTVNHAESTLARMAATN 76

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPK----GGGIE-----NGTQF 116
            + E L    LY  +EPC MCA     A I R+ +G +  +     G        + +  
Sbjct: 77  YTAEFLWSCTLYTNVEPCCMCAGTAYWANIGRIVFGMTEHRLLECTGSHGENPTMSVSSR 136

Query: 117 YTLATCHHSPEIYPGISEQRSR 138
           Y    C  + E+   + E  + 
Sbjct: 137 YVFDHCQKAVELIGPVPEMEAE 158


>gi|115350875|ref|YP_772714.1| riboflavin biosynthesis protein RibD [Burkholderia ambifaria AMMD]
 gi|115280863|gb|ABI86380.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Burkholderia
           ambifaria AMMD]
          Length = 373

 Score = 93.4 bits (232), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 33/154 (21%), Positives = 52/154 (33%), Gaps = 20/154 (12%)

Query: 1   MKKGNVF--MSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56
           M     F  M  AL  A          P VG V V +  +I     +         HAE+
Sbjct: 1   MFSDTDFAHMQRALTLAARGMYTTAPNPRVGCVIVKDGNVIGEGFTQPAGQD----HAEV 56

Query: 57  LAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGI 110
            A++          +    +YVTLEPC        CA A+  AR+ ++     +P     
Sbjct: 57  QALKDA--RARGHDVAGSTVYVTLEPCSHFGRTPPCANALIDARVAKVVAAMEDPNPQVS 114

Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
             G      A      ++  G+    + ++   F
Sbjct: 115 GRGLGMLRDAG----IDVRCGLLANEAGELNIGF 144


>gi|56460970|ref|YP_156251.1| riboflavin-specific deaminase/reductase [Idiomarina loihiensis
           L2TR]
 gi|56179980|gb|AAV82702.1| Riboflavin-specific deaminase/reductase [Idiomarina loihiensis
           L2TR]
          Length = 375

 Score = 93.4 bits (232), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 32/152 (21%), Positives = 53/152 (34%), Gaps = 21/152 (13%)

Query: 4   GNVFMSCALEEAQNAAL--RNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
            +  M  AL  A+   +  R    VG V  L  +++    +          HAE+ A+R 
Sbjct: 10  DHQMMHRALMLARRGLMTTRPNPAVGCVITLGTEVVGEGWHHQAGE----PHAEVHALRA 65

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
             + +          YVTLEPC        C  A+  A ++R+     +P      NG Q
Sbjct: 66  AGQKV-----RGATAYVTLEPCSHIGRTPPCCDALIEAGVKRVVVAMQDPNPRVSGNGIQ 120

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
               A       +  G+ +  +  +   F   
Sbjct: 121 RLKAAG----ISVDVGVLQLAAESLNPGFISR 148


>gi|254474256|ref|ZP_05087646.1| Cytidine and deoxycytidylate deaminase zinc-binding region domain
           protein [Pseudovibrio sp. JE062]
 gi|211956630|gb|EEA91840.1| Cytidine and deoxycytidylate deaminase zinc-binding region domain
           protein [Pseudovibrio sp. JE062]
          Length = 169

 Score = 93.4 bits (232), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 32/128 (25%), Positives = 47/128 (36%), Gaps = 8/128 (6%)

Query: 25  PVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83
           P G        +++++A +   +  D T H EI AIR+          P   LY T EPC
Sbjct: 31  PFGCAVYSSEGELLAQAYDSVIKECDPTCHGEINAIRLASETSKTRSFPGGILYSTCEPC 90

Query: 84  TMCAAAISLARIRRLYYGA-SNPKGGGI------ENGTQFYTLATCHHSPEIYPGISEQR 136
            MC AA   A    L +GA +N                             I+ G+  Q 
Sbjct: 91  AMCMAATIWAGFDTLVFGAYTNEDATNFWPQEMNLRAKDLAASMVQRPEIAIFEGVERQA 150

Query: 137 SRQIIQDF 144
            +Q+  D+
Sbjct: 151 CQQLFTDY 158


>gi|21229130|ref|NP_635052.1| deoxycytidylate deaminase [Methanosarcina mazei Go1]
 gi|20907690|gb|AAM32724.1| Deoxycytidylate deaminase [Methanosarcina mazei Go1]
          Length = 172

 Score = 93.1 bits (231), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 25/101 (24%), Positives = 40/101 (39%), Gaps = 6/101 (5%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAIR 60
                M  A+  AQ +      P+G V +    ++I+ +  N   +  D   H E  AIR
Sbjct: 19  SDRDIMCIAVLLAQKSYDEGGCPIGGVIIDSKTHRIVGKGHNTLVQDNDPYNHGETSAIR 78

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
              R           ++ TL PC +CA  I + +  R+  G
Sbjct: 79  DAGRQ----DFSNATIFTTLSPCDVCATLIYMRQFDRVVIG 115


>gi|261365730|ref|ZP_05978613.1| riboflavin biosynthesis protein RibD [Neisseria mucosa ATCC 25996]
 gi|288565756|gb|EFC87316.1| riboflavin biosynthesis protein RibD [Neisseria mucosa ATCC 25996]
          Length = 365

 Score = 93.1 bits (231), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 33/149 (22%), Positives = 53/149 (35%), Gaps = 21/149 (14%)

Query: 4   GNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
               M  AL  A+      +  P VG V     +I+ +  +          HAE+ A+R 
Sbjct: 6   DTQMMQNALALARLGRFSTSPNPRVGCVIAHGGQIVGQGFHVKAGE----PHAEVHALRQ 61

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
              +           YVTLEPC        CA A+  + + R+    ++P       G  
Sbjct: 62  AGEMA-----RGATAYVTLEPCSHYGRTPPCAEALISSGVSRVVAAMTDPNPLVAGKGLA 116

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDF 144
               A      E   G+ E  +R++ + F
Sbjct: 117 MLEAAGI--RTE--SGLLEAEARELNRGF 141


>gi|256392530|ref|YP_003114094.1| CMP/dCMP deaminase zinc-binding [Catenulispora acidiphila DSM
           44928]
 gi|256358756|gb|ACU72253.1| CMP/dCMP deaminase zinc-binding [Catenulispora acidiphila DSM
           44928]
          Length = 143

 Score = 93.1 bits (231), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 25/99 (25%), Positives = 42/99 (42%), Gaps = 1/99 (1%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMG 62
               +  A++ A +A    + P G++    +  I+    N  R   D+ AH E+   R  
Sbjct: 6   DETLLRRAIDIAAHAVTLGDAPYGSLLADADGTILIEEHNTVRRDGDIAAHPELKLARWA 65

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
            R LS E      +Y + +PC MC   I  + + R+ Y 
Sbjct: 66  ARELSPEAAATTTMYTSCQPCGMCTGGIVRSGLGRVVYA 104


>gi|169772375|ref|XP_001820656.1| cytosine deaminase [Aspergillus oryzae RIB40]
 gi|83768517|dbj|BAE58654.1| unnamed protein product [Aspergillus oryzae]
          Length = 162

 Score = 93.1 bits (231), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 28/103 (27%), Positives = 47/103 (45%), Gaps = 1/103 (0%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIR 60
           +    ++   ++ A+ A    + P G+V V    K+I    NR     DVT H E   ++
Sbjct: 4   ESDINYLRRCVDLAREALEAGDSPFGSVLVDAAGKVIYEDRNRTVTEADVTWHPEFTIVK 63

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
              + L+        +Y + E C MCAAA + A + R+ Y +S
Sbjct: 64  WAQKNLTPTERAAATVYTSGEHCPMCAAAHANAGLGRIVYASS 106


>gi|172059887|ref|YP_001807539.1| riboflavin biosynthesis protein RibD [Burkholderia ambifaria
           MC40-6]
 gi|171992404|gb|ACB63323.1| riboflavin biosynthesis protein RibD [Burkholderia ambifaria
           MC40-6]
          Length = 373

 Score = 93.1 bits (231), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 32/154 (20%), Positives = 52/154 (33%), Gaps = 20/154 (12%)

Query: 1   MKKGNVF--MSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56
           M     F  M  AL  A          P VG V V +  +I     +         HAE+
Sbjct: 1   MFSDTDFAHMQRALTLAARGMYTTAPNPRVGCVIVKDGNVIGEGFTQPAGQD----HAEV 56

Query: 57  LAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGI 110
            A++          +    +YVTLEPC        CA A+  AR+ ++     +P     
Sbjct: 57  QALKDA--RARGHDVAGSTVYVTLEPCSHFGRTPPCANALIDARVAKVVAAMEDPNPQVS 114

Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
             G      +      ++  G+    + ++   F
Sbjct: 115 GRGLGMLRDSG----IDVRCGLLANEAGELNIGF 144


>gi|126728506|ref|ZP_01744322.1| hypothetical protein SSE37_20987 [Sagittula stellata E-37]
 gi|126711471|gb|EBA10521.1| hypothetical protein SSE37_20987 [Sagittula stellata E-37]
          Length = 156

 Score = 93.1 bits (231), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 29/77 (37%), Positives = 38/77 (49%), Gaps = 2/77 (2%)

Query: 32  LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAIS 91
             + +++R  N      D + HAEI+AI   CR L    L    L  TL+PC MC  AI 
Sbjct: 37  RGDTLLARGANEVHLNHDPSRHAEIVAISAACRALGTADLSGCTLLTTLQPCEMCLGAIR 96

Query: 92  LARIRRLYYGASNPKGG 108
            A I R+ + A   KGG
Sbjct: 97  FAGIGRVIFAAR--KGG 111


>gi|183222799|ref|YP_001840795.1| putative cytidine/adenosine deaminase [Leptospira biflexa serovar
           Patoc strain 'Patoc 1 (Paris)']
 gi|189912831|ref|YP_001964386.1| cytosine/adenosine deaminase [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Ames)']
 gi|167777507|gb|ABZ95808.1| Cytosine/adenosine deaminase [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Ames)']
 gi|167781221|gb|ABZ99519.1| Putative cytidine/adenosine deaminase [Leptospira biflexa serovar
           Patoc strain 'Patoc 1 (Paris)']
          Length = 146

 Score = 93.1 bits (231), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 39/151 (25%), Positives = 66/151 (43%), Gaps = 7/151 (4%)

Query: 1   MKKGNVFMSC-ALEEAQNAALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           M     F+   ++E ++    +NEIP    +   +  ++S + N   +  + T H+EILA
Sbjct: 1   MDFYESFLKRYSIEVSKY---KNEIPSYSEIITKDGNLVSSSFNSVEQTLNPTKHSEILA 57

Query: 59  IRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
           I      +    L E  L   LEPC +CA A+   ++  + Y     K G   +     +
Sbjct: 58  IEKALSHVDGRYLSEHILITALEPCILCAGAVVRVKLPEVVYFLP-AKPGEGISSYTTES 116

Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
           +   +H P+    I E R +     FFKE+R
Sbjct: 117 IYLLNHFPKCTL-IPESRIKFEFLSFFKEKR 146


>gi|90410896|ref|ZP_01218910.1| Putative pyrimidine deaminase/pyrimidine reductase [Photobacterium
           profundum 3TCK]
 gi|90328109|gb|EAS44420.1| Putative pyrimidine deaminase/pyrimidine reductase [Photobacterium
           profundum 3TCK]
          Length = 371

 Score = 93.1 bits (231), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 33/152 (21%), Positives = 53/152 (34%), Gaps = 21/152 (13%)

Query: 4   GNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
            +  M  A+E A+         P VG V    + I+    +   +      HAE+ A+R 
Sbjct: 6   DHSMMLRAIELAKRGRFTTAPNPNVGCVIAQGSTIVGEGFH--YQAGQP--HAEVFALRA 61

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
                          YVTLEPC        CA A+  A + R+     +P       G +
Sbjct: 62  AGEQT-----KGATAYVTLEPCSHFGRTPPCAQALINANVSRVVCAMVDPNPKVGGRGIE 116

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
              +A      E+  G+    ++ +   F K 
Sbjct: 117 MLQIAG----IEVQTGLLAADAQALNPGFIKR 144


>gi|158336980|ref|YP_001518155.1| riboflavin biosynthesis protein RibD [Acaryochloris marina
           MBIC11017]
 gi|158307221|gb|ABW28838.1| riboflavin biosynthesis protein RibD [Acaryochloris marina
           MBIC11017]
          Length = 387

 Score = 93.1 bits (231), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 32/150 (21%), Positives = 53/150 (35%), Gaps = 23/150 (15%)

Query: 4   GNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
               M   L+ AQ AA     P   VG V   + +I+    +          HAE+ A+R
Sbjct: 23  HQQMMQRCLQLAQKAAGFT-TPNPLVGCVIERDGEIVGEGYHPKAGE----PHAEVFALR 77

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
                           YV+LEPC        C+ A+  A +  +  G  +P       G 
Sbjct: 78  AAGDKA-----KGATAYVSLEPCNHFGRTPPCSEALVKAGVATVVVGMVDPDPRVSGKGI 132

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
           +    A      ++  G+ E   +++ + F
Sbjct: 133 ERLRAAG----IQVITGVEEADCQRVNEAF 158


>gi|157146970|ref|YP_001454289.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Citrobacter koseri ATCC BAA-895]
 gi|157084175|gb|ABV13853.1| hypothetical protein CKO_02747 [Citrobacter koseri ATCC BAA-895]
          Length = 367

 Score = 93.1 bits (231), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 36/154 (23%), Positives = 56/154 (36%), Gaps = 21/154 (13%)

Query: 4   GNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
              +M+ AL+ AQ      +  P VG V V + +I+    +          HAE+ A+RM
Sbjct: 3   DEFYMARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHHRAGE----PHAEVHALRM 58

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
                          YVTLEPC        C  A+  A + R+     +P       G  
Sbjct: 59  AGDKA-----KGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVAAMQDPNPQVAGRGLY 113

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
               A      ++  G+    + Q+ + F K  R
Sbjct: 114 RLQQAG----IDVSHGLMMSETEQLNKGFLKRMR 143


>gi|269837993|ref|YP_003320221.1| riboflavin biosynthesis protein RibD [Sphaerobacter thermophilus
           DSM 20745]
 gi|269787256|gb|ACZ39399.1| riboflavin biosynthesis protein RibD [Sphaerobacter thermophilus
           DSM 20745]
          Length = 387

 Score = 93.1 bits (231), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 35/129 (27%), Positives = 49/129 (37%), Gaps = 21/129 (16%)

Query: 3   KGNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
               +M  AL+ A  A+ R  +   P VGAV V + +++              AHAEI+A
Sbjct: 12  TDLHWMRRALDLA--ASARGRVAPNPAVGAVLVRDGRLVGEGA----TEPPPGAHAEIVA 65

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
           +R    +          LYVTLEPC        C  A+  A I R      +P       
Sbjct: 66  LRQAGALA-----RGATLYVTLEPCAHYGRTPPCVDALIAAGIARAVVALRDPYPAVNGR 120

Query: 113 GTQFYTLAT 121
           G +    A 
Sbjct: 121 GLRLLAEAG 129


>gi|222085509|ref|YP_002544039.1| 5-amino-6-(5-phosphoribosylamino)uracil
           reductase/diaminohydroxyphosphoribosylaminopyrimidine
           deaminase protein [Agrobacterium radiobacter K84]
 gi|221722957|gb|ACM26113.1| 5-amino-6-(5-phosphoribosylamino)uracil
           reductase/diaminohydroxyphosphoribosylaminopyrimidine
           deaminase protein [Agrobacterium radiobacter K84]
          Length = 371

 Score = 93.1 bits (231), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 30/154 (19%), Positives = 49/154 (31%), Gaps = 26/154 (16%)

Query: 3   KGNVFMSCALEEAQ--NAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
               FM+ A+  ++           VG V V +  +I R             HAE  A+ 
Sbjct: 8   DDERFMAAAIRLSRWHLGLTSTNPSVGCVIVKDGAVIGRGVTAVGGR----PHAETQALA 63

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
                           YVTLEPC        C+ A+    + R+    ++P       G 
Sbjct: 64  DAGEAA-----RGATAYVTLEPCSHYGKTPPCSEALIAYGVARVVISVTDPDQRVSGRGI 118

Query: 115 QFYTLATCHHSPEIYPGISEQR-----SRQIIQD 143
                A      E+  GI E+      +  +++ 
Sbjct: 119 AMLRDAG----IEVDIGILEEEGRHSLAGYLMRQ 148


>gi|2766596|gb|AAB95439.1| homologue of Bacillus subtilis ribG [Shigella flexneri]
          Length = 245

 Score = 93.1 bits (231), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 36/155 (23%), Positives = 57/155 (36%), Gaps = 21/155 (13%)

Query: 3   KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +   +M+ AL+ AQ      +  P VG V V + +I+    ++         HAE+ A+R
Sbjct: 2   QDEYYMARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGE----PHAEVHALR 57

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           M               YVTLEPC        C  A+  A + R+     +P       G 
Sbjct: 58  MAGEKA-----KGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVAAMQDPNPQVAGRGL 112

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
                A      ++  G+      Q+ + F K  R
Sbjct: 113 YRLQQAG----IDVSHGLMMSEPEQLNKGFLKRMR 143


>gi|322797886|gb|EFZ19783.1| hypothetical protein SINV_80092 [Solenopsis invicta]
          Length = 423

 Score = 93.1 bits (231), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 20/81 (24%), Positives = 43/81 (53%)

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
            +     +      ++ +EPC +CA A+  +R+ R++YG +N   G + + T  +T+   
Sbjct: 335 AKKCGPYLCTGYWAFLLVEPCPLCAMALLHSRVARIFYGTANESAGVLGSRTVLHTVPGL 394

Query: 123 HHSPEIYPGISEQRSRQIIQD 143
           +H   ++ GI E+  RQ +++
Sbjct: 395 NHRYRVWSGILERECRQALEE 415



 Score = 34.9 bits (80), Expect = 3.7,   Method: Composition-based stats.
 Identities = 21/77 (27%), Positives = 34/77 (44%), Gaps = 8/77 (10%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGA-VAVL--NNKIISRAGNRNRELKDVTAHAEILAIRM 61
              MS  +E A+  A+ +E   GA V V   + +I++ A    R  K    HA +LA+ +
Sbjct: 169 ERIMSLVIEAAKLEAIGDERCTGATVIVDPEDGRILAVA--AARLDKHPMWHAAMLAVDL 226

Query: 62  GCRILSQ--EILP-EVD 75
             R+       L  + D
Sbjct: 227 IARLHGGGAWELNEDCD 243


>gi|282855094|ref|ZP_06264426.1| riboflavin biosynthesis protein RibD [Propionibacterium acnes J139]
 gi|282581682|gb|EFB87067.1| riboflavin biosynthesis protein RibD [Propionibacterium acnes J139]
          Length = 331

 Score = 93.1 bits (231), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 30/125 (24%), Positives = 48/125 (38%), Gaps = 20/125 (16%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85
           VG V V  +++I +  +R       T HAE+ A+R        +        VTLEPC  
Sbjct: 28  VGCVIVAEDRVIGQGWHR----GAGTPHAEVEALRQAG-----DDARGATAVVTLEPCHH 78

Query: 86  ------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139
                 C+ A+  A I R+    S+P            T     H  E+  G+  + +  
Sbjct: 79  TGRTGPCSHALVDAGIARVVIAQSDPNPVASGGEQWLRT-----HGVEVVTGVLSEEATA 133

Query: 140 IIQDF 144
           +  D+
Sbjct: 134 LNADW 138


>gi|254459689|ref|ZP_05073105.1| riboflavin biosynthesis protein RibD [Rhodobacterales bacterium
           HTCC2083]
 gi|206676278|gb|EDZ40765.1| riboflavin biosynthesis protein RibD [Rhodobacteraceae bacterium
           HTCC2083]
          Length = 364

 Score = 93.1 bits (231), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 33/151 (21%), Positives = 50/151 (33%), Gaps = 21/151 (13%)

Query: 3   KGNVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
               +M  AL  A+    R      VG V V   +I+ R   +         HAE++A+ 
Sbjct: 4   SDQAYMKMALSLARRGLGRTWPNPAVGCVIVNAGRIVGRGWTQVGGR----PHAEVVALV 59

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
              +            YVTLEPC        C+ A+  A I R+     +        G 
Sbjct: 60  QAGK-----RANGATAYVTLEPCAHHGQTPPCSEALIEAGIARVVAAMEDSDPRVSGRGF 114

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
                A       +  GI  + + +    FF
Sbjct: 115 AQLRGAG----VVVETGICAKDAAESNAGFF 141


>gi|317054543|ref|YP_004118568.1| CMP/dCMP deaminase zinc-binding protein [Pantoea sp. At-9b]
 gi|316952538|gb|ADU72012.1| CMP/dCMP deaminase zinc-binding protein [Pantoea sp. At-9b]
          Length = 158

 Score = 93.1 bits (231), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 31/109 (28%), Positives = 45/109 (41%), Gaps = 7/109 (6%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNK--IISRAGNRNRELKDVTAHAEILAIRM 61
              F+  + E  + A    + P GAV V  ++  ++    N      D   HAE    R+
Sbjct: 6   DIHFLRLSNEVGRRAIALGKHPFGAVLVAPDQQTVLLTQCN-----IDTVNHAESTLARI 60

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI 110
                S E L +  LY  +EPC MCA  I  A I R+ +G S  +    
Sbjct: 61  AATNFSAEYLWQCTLYTAVEPCCMCAGTIYWANIGRVVFGMSETRLLAC 109


>gi|327332327|gb|EGE74063.1| riboflavin biosynthesis protein RibD [Propionibacterium acnes
           HL097PA1]
          Length = 331

 Score = 93.1 bits (231), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 30/125 (24%), Positives = 48/125 (38%), Gaps = 20/125 (16%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85
           VG V V  +++I +  +R       T HAE+ A+R        +        VTLEPC  
Sbjct: 28  VGCVIVAEDRVIGQGWHR----GAGTPHAEVEALRQAG-----DDARGATAVVTLEPCHH 78

Query: 86  ------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139
                 C+ A+  A I R+    S+P            T     H  E+  G+  + +  
Sbjct: 79  TGRTGPCSHALVDAGIARVVIAQSDPNPVASGGEQWLRT-----HGVEVVTGVLSEEATA 133

Query: 140 IIQDF 144
           +  D+
Sbjct: 134 LNADW 138


>gi|50843212|ref|YP_056439.1| riboflavin biosynthesis protein RibD [Propionibacterium acnes
           KPA171202]
 gi|50840814|gb|AAT83481.1| riboflavin biosynthesis protein RibD [Propionibacterium acnes
           KPA171202]
 gi|315106176|gb|EFT78152.1| riboflavin biosynthesis protein RibD [Propionibacterium acnes
           HL030PA1]
          Length = 331

 Score = 93.1 bits (231), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 30/125 (24%), Positives = 48/125 (38%), Gaps = 20/125 (16%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85
           VG V V  +++I +  +R       T HAE+ A+R        +        VTLEPC  
Sbjct: 28  VGCVIVAEDRVIGQGWHR----GAGTPHAEVEALRQAG-----DDARGATAVVTLEPCHH 78

Query: 86  ------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139
                 C+ A+  A I R+    S+P            T     H  E+  G+  + +  
Sbjct: 79  TGRTGPCSHALVDAGIARVVIAQSDPNPVASGGEQWLRT-----HGVEVVTGVLSEEATA 133

Query: 140 IIQDF 144
           +  D+
Sbjct: 134 LNADW 138


>gi|271499575|ref|YP_003332600.1| riboflavin biosynthesis protein RibD [Dickeya dadantii Ech586]
 gi|270343130|gb|ACZ75895.1| riboflavin biosynthesis protein RibD [Dickeya dadantii Ech586]
          Length = 370

 Score = 93.1 bits (231), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 37/155 (23%), Positives = 57/155 (36%), Gaps = 21/155 (13%)

Query: 3   KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
               +M+ ALE A+         P VG V V + +I+    ++         HAE+ A+R
Sbjct: 5   SDEFYMARALELARRGRFTTAPNPNVGCVIVRDGEIVGEGYHQKAGE----PHAEVHALR 60

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           M               YVTLEPC        CA A+  A + R+     +P       G 
Sbjct: 61  MAGDKA-----RGATAYVTLEPCSHHGRTPPCADALVAAGVARVVAAMQDPNPQVAGRGL 115

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
                A       +  G+   ++ +I + F K  R
Sbjct: 116 HRLQQAG----IAVQHGVLMDQAEKINRGFLKRMR 146


>gi|289424953|ref|ZP_06426732.1| riboflavin biosynthesis protein RibD [Propionibacterium acnes
           SK187]
 gi|289154652|gb|EFD03338.1| riboflavin biosynthesis protein RibD [Propionibacterium acnes
           SK187]
 gi|313763122|gb|EFS34486.1| riboflavin biosynthesis protein RibD [Propionibacterium acnes
           HL013PA1]
 gi|313793372|gb|EFS41430.1| riboflavin biosynthesis protein RibD [Propionibacterium acnes
           HL110PA1]
 gi|313800984|gb|EFS42252.1| riboflavin biosynthesis protein RibD [Propionibacterium acnes
           HL110PA2]
 gi|313812185|gb|EFS49899.1| riboflavin biosynthesis protein RibD [Propionibacterium acnes
           HL025PA1]
 gi|313814722|gb|EFS52436.1| riboflavin biosynthesis protein RibD [Propionibacterium acnes
           HL059PA1]
 gi|313828278|gb|EFS65992.1| riboflavin biosynthesis protein RibD [Propionibacterium acnes
           HL063PA2]
 gi|313838062|gb|EFS75776.1| riboflavin biosynthesis protein RibD [Propionibacterium acnes
           HL086PA1]
 gi|314914448|gb|EFS78279.1| riboflavin biosynthesis protein RibD [Propionibacterium acnes
           HL005PA4]
 gi|314917772|gb|EFS81603.1| riboflavin biosynthesis protein RibD [Propionibacterium acnes
           HL050PA1]
 gi|314919502|gb|EFS83333.1| riboflavin biosynthesis protein RibD [Propionibacterium acnes
           HL050PA3]
 gi|314930094|gb|EFS93925.1| riboflavin biosynthesis protein RibD [Propionibacterium acnes
           HL067PA1]
 gi|314957061|gb|EFT01166.1| riboflavin biosynthesis protein RibD [Propionibacterium acnes
           HL027PA1]
 gi|314957695|gb|EFT01798.1| riboflavin biosynthesis protein RibD [Propionibacterium acnes
           HL002PA1]
 gi|314963428|gb|EFT07528.1| riboflavin biosynthesis protein RibD [Propionibacterium acnes
           HL082PA1]
 gi|314968931|gb|EFT13029.1| riboflavin biosynthesis protein RibD [Propionibacterium acnes
           HL037PA1]
 gi|315077277|gb|EFT49339.1| riboflavin biosynthesis protein RibD [Propionibacterium acnes
           HL053PA2]
 gi|315079956|gb|EFT51932.1| riboflavin biosynthesis protein RibD [Propionibacterium acnes
           HL078PA1]
 gi|315097872|gb|EFT69848.1| riboflavin biosynthesis protein RibD [Propionibacterium acnes
           HL059PA2]
 gi|315100736|gb|EFT72712.1| riboflavin biosynthesis protein RibD [Propionibacterium acnes
           HL046PA1]
 gi|315109263|gb|EFT81239.1| riboflavin biosynthesis protein RibD [Propionibacterium acnes
           HL030PA2]
 gi|327451322|gb|EGE97976.1| riboflavin biosynthesis protein RibD [Propionibacterium acnes
           HL087PA3]
 gi|327451701|gb|EGE98355.1| riboflavin biosynthesis protein RibD [Propionibacterium acnes
           HL092PA1]
 gi|327452164|gb|EGE98818.1| riboflavin biosynthesis protein RibD [Propionibacterium acnes
           HL083PA2]
 gi|328752420|gb|EGF66036.1| riboflavin biosynthesis protein RibD [Propionibacterium acnes
           HL087PA1]
 gi|328755093|gb|EGF68709.1| riboflavin biosynthesis protein RibD [Propionibacterium acnes
           HL025PA2]
          Length = 331

 Score = 93.1 bits (231), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 30/125 (24%), Positives = 48/125 (38%), Gaps = 20/125 (16%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85
           VG V V  +++I +  +R       T HAE+ A+R        +        VTLEPC  
Sbjct: 28  VGCVIVAEDRVIGQGWHR----GAGTPHAEVEALRQAG-----DDARGATAVVTLEPCHH 78

Query: 86  ------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139
                 C+ A+  A I R+    S+P            T     H  E+  G+  + +  
Sbjct: 79  TGRTGPCSHALVDAGIARVVIAQSDPNPVASGGEQWLRT-----HGVEVVTGVLSEEATA 133

Query: 140 IIQDF 144
           +  D+
Sbjct: 134 LNADW 138


>gi|227821532|ref|YP_002825502.1| riboflavin biosynthesis protein RibD [Sinorhizobium fredii NGR234]
 gi|227340531|gb|ACP24749.1| riboflavin biosynthesis protein RibD [Sinorhizobium fredii NGR234]
          Length = 367

 Score = 93.1 bits (231), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 33/156 (21%), Positives = 54/156 (34%), Gaps = 21/156 (13%)

Query: 2   KKGNVFMSCALEEAQN--AALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
           ++   FM+ AL  A+           VG V V ++ I+ RA            HAE  A+
Sbjct: 6   REDERFMAAALRLARRNLGLTSTNPSVGCVIVKDDTIVGRA----VTAPGGRPHAETQAL 61

Query: 60  RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113
                    E       YVTLEPC        C  A+  + I R+     +P       G
Sbjct: 62  ADAG-----EQARGATAYVTLEPCSHHGRTPPCVDALIASGIARVVVCLLDPDERVAGRG 116

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
                 A      ++  G+      ++++ +   +R
Sbjct: 117 VVMLRDAG----IDVDLGVLRDEGERVLEAYLMRQR 148


>gi|228475866|ref|ZP_04060576.1| riboflavin biosynthesis protein RibD [Staphylococcus hominis SK119]
 gi|314936136|ref|ZP_07843483.1| riboflavin biosynthesis protein RibD [Staphylococcus hominis subsp.
           hominis C80]
 gi|228270021|gb|EEK11491.1| riboflavin biosynthesis protein RibD [Staphylococcus hominis SK119]
 gi|313654755|gb|EFS18500.1| riboflavin biosynthesis protein RibD [Staphylococcus hominis subsp.
           hominis C80]
          Length = 347

 Score = 93.1 bits (231), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 31/150 (20%), Positives = 59/150 (39%), Gaps = 24/150 (16%)

Query: 7   FMSCALEEAQNAALRNEI--PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           FM  A++ AQ    +  +  PVG+V V + +I+    +  +  K    HAE+ A+ M   
Sbjct: 4   FMKYAIQLAQMVEGQTGVNPPVGSVVVKDGRIVGLGAHLKQGEK----HAEVQALDMA-- 57

Query: 65  ILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
              Q+      +Y++LEPC        C   I    + ++ Y   +     + +      
Sbjct: 58  ---QDKAKGGTIYISLEPCTHYGSTPPCVNKIIEHGLSKVIYAVKDTT---LSSEGDIIL 111

Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKER 148
                   E+      + +  + +DFFK +
Sbjct: 112 EKA---GIEVEYQY-SEEAFALYEDFFKAK 137


>gi|148262423|ref|YP_001229129.1| CMP/dCMP deaminase, zinc-binding [Geobacter uraniireducens Rf4]
 gi|146395923|gb|ABQ24556.1| CMP/dCMP deaminase, zinc-binding protein [Geobacter uraniireducens
           Rf4]
          Length = 196

 Score = 93.1 bits (231), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 32/148 (21%), Positives = 58/148 (39%), Gaps = 11/148 (7%)

Query: 8   MSCALEEAQNAALRN-EIPVGA-VAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M   +E ++         P GA V   + ++I+   N          HAE +A+    + 
Sbjct: 32  MRFVIELSRQNVRHGTGGPFGAAVFDSDGQLIAPGINMVVISNCSLLHAETVALACAQKA 91

Query: 66  LSQEILPE-----VDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN--GTQFYT 118
           L +  +        DL+ T EPC MC  AI  + +RRL  GA +     I    G +   
Sbjct: 92  LGRYDIGNGGRLRYDLFATTEPCAMCFGAIPWSGVRRLVCGARDADARAIGFDEGPKLAD 151

Query: 119 -LATCHHS-PEIYPGISEQRSRQIIQDF 144
            +A  +     +   +    +  ++Q++
Sbjct: 152 WVAALNARGITVLRDVLRNEAVAVLQEY 179


>gi|56475984|ref|YP_157573.1| riboflavin biosynthesis bifunctional RIBD:
           diaminohydroxyphosphoribosylaminopyrimid ine deaminase +
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           oxidoreductase protein [Aromatoleum aromaticum EbN1]
 gi|56312027|emb|CAI06672.1| riboflavin biosynthesis bifunctional RIBD:
           diaminohydroxyphosphoribosylaminopyrimid ine deaminase +
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           oxidoreductase protein [Aromatoleum aromaticum EbN1]
          Length = 366

 Score = 92.7 bits (230), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 33/152 (21%), Positives = 53/152 (34%), Gaps = 23/152 (15%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           +  +V M+ AL+ A+        P   VG V +    I+    +R         HAE++A
Sbjct: 5   EADHVAMARALQLAERGLETT-TPNPRVGCVLMKEGSIVGEGWHRRAGE----PHAEVIA 59

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
           +R                YVTLEPC        CA A+  A + R+     +P       
Sbjct: 60  LRAAGDTA-----RGATAYVTLEPCTHHGRTPPCADALIAAGVTRVVAAMEDPNPLVAGT 114

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
           G      A       +  G+    + ++   F
Sbjct: 115 GVGRLRAAGL----AVTTGLLASDAHELNIGF 142


>gi|28210395|ref|NP_781339.1| riboflavin biosynthesis protein [Clostridium tetani E88]
 gi|28202832|gb|AAO35276.1| riboflavin biosynthesis protein [Clostridium tetani E88]
          Length = 380

 Score = 92.7 bits (230), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 41/154 (26%), Positives = 57/154 (37%), Gaps = 21/154 (13%)

Query: 1   MKKGNVFMSCALEEAQNAAL-RNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           M    ++M  A+E A       N  P VGAV V + +II    ++        AHAEI A
Sbjct: 19  MNLDEIYMKRAIELAHLGEGYVNPNPLVGAVIVKDGRIIGEGYHKKFGE----AHAEIEA 74

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
                    +E      LYV LEPC        C   I    I+++  G  +P       
Sbjct: 75  F-----KSCKEDPKGGTLYVNLEPCSHYGKTPPCVDVIIKKGIKKVIIGMKDPNPLVAGR 129

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
           G +    A      E+  G  E   R + + F K
Sbjct: 130 GLEILKKAN----IEVRVGTLEDECRNLNEIFIK 159


>gi|329848658|ref|ZP_08263686.1| riboflavin biosynthesis protein ribD [Asticcacaulis biprosthecum
           C19]
 gi|328843721|gb|EGF93290.1| riboflavin biosynthesis protein ribD [Asticcacaulis biprosthecum
           C19]
          Length = 299

 Score = 92.7 bits (230), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 32/148 (21%), Positives = 49/148 (33%), Gaps = 22/148 (14%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTA-HAEILAIRMGC 63
             FM  A+  A+         VG V V ++ ++           D    HAE  A+ M  
Sbjct: 99  EPFMRQAIALARPGHTWPNPAVGCVLVKDDVVVGEG-----ATGDGGRPHAEENALDMAG 153

Query: 64  RILSQEILPEVDLYVTLEPC-------TMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116
            +           YVTLEPC         C+  +  A + R+ Y   +P       G Q 
Sbjct: 154 DVA-----RGATAYVTLEPCGKRSTGCASCSERLVAAGVARVVYACDDPSPFASHVGPQR 208

Query: 117 YTLATCHHSPEIYPGISEQRSRQIIQDF 144
              A       +  G+    +  +I  F
Sbjct: 209 LRDAG----ITVEAGLLHDEAAHLIAPF 232


>gi|221201163|ref|ZP_03574203.1| riboflavin biosynthesis protein RibD [Burkholderia multivorans
           CGD2M]
 gi|221206384|ref|ZP_03579397.1| riboflavin biosynthesis protein RibD [Burkholderia multivorans
           CGD2]
 gi|221213661|ref|ZP_03586635.1| riboflavin biosynthesis protein RibD [Burkholderia multivorans
           CGD1]
 gi|221166450|gb|EED98922.1| riboflavin biosynthesis protein RibD [Burkholderia multivorans
           CGD1]
 gi|221173693|gb|EEE06127.1| riboflavin biosynthesis protein RibD [Burkholderia multivorans
           CGD2]
 gi|221179013|gb|EEE11420.1| riboflavin biosynthesis protein RibD [Burkholderia multivorans
           CGD2M]
          Length = 373

 Score = 92.7 bits (230), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 33/154 (21%), Positives = 53/154 (34%), Gaps = 20/154 (12%)

Query: 1   MKKGNVF--MSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56
           M     F  M  AL  A          P VG V V + ++I     +         HAE+
Sbjct: 1   MFSDIDFAHMQRALALAARGMYTTTPNPRVGCVIVKHGEVIGEGHTQPPGQD----HAEV 56

Query: 57  LAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGI 110
            A++          +    +YVTLEPC        CA A+  AR+ ++     +P     
Sbjct: 57  QALKDA--RARGHDVAGSTVYVTLEPCSHFGRTPPCANALIEARVAKVVAAMEDPNPLVS 114

Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
             G      A      ++  G+    + ++   F
Sbjct: 115 GRGLGMLRDAG----IDVRCGLLAHEAGELNIGF 144


>gi|116623314|ref|YP_825470.1| 5-amino-6-(5-phosphoribosylamino)uracil
           reductase/diaminohydroxyphosphoribosylaminopyrimidine
           deaminase [Candidatus Solibacter usitatus Ellin6076]
 gi|116226476|gb|ABJ85185.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase /
           diaminohydroxyphosphoribosylaminopyrimidine deaminase
           [Candidatus Solibacter usitatus Ellin6076]
          Length = 369

 Score = 92.7 bits (230), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 34/138 (24%), Positives = 51/138 (36%), Gaps = 24/138 (17%)

Query: 7   FMSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           +M  AL+ A+         P VGAV V + K++ R  +    L     HAEI+A+     
Sbjct: 5   YMREALDLARKGRSLASPNPLVGAVIVRDGKVVGRGFHTYAGLH----HAEIIALAQAG- 59

Query: 65  ILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
               E     ++Y+ LEPC        C  A+  A I R+    S+P       G     
Sbjct: 60  ----EQARGAEIYLNLEPCSHQGRTPPCVDALIRAGIARVVAPLSDPNPLVAGQGFARLR 115

Query: 119 LATCHHSPEIYPGISEQR 136
            A      E+   +    
Sbjct: 116 EAG----IEV---VMADE 126


>gi|88608126|ref|YP_506383.1| riboflavin biosynthesis protein RibD [Neorickettsia sennetsu str.
           Miyayama]
 gi|88600295|gb|ABD45763.1| riboflavin biosynthesis protein RibD [Neorickettsia sennetsu str.
           Miyayama]
          Length = 372

 Score = 92.7 bits (230), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 26/140 (18%), Positives = 52/140 (37%), Gaps = 21/140 (15%)

Query: 6   VFMSCALEEAQ--NAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
            +M  A+  +        +   VG + V +++++ +         + + HAE +A+++  
Sbjct: 12  YYMEAAVNASLFGQGFTADNPSVGCIIVKDDEVVGKG----VTGINGSPHAEAVALKVAG 67

Query: 64  RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFY 117
                      DLY TLEPC        C   I  + I+ ++ G  +P       G Q  
Sbjct: 68  IKA-----RGADLYTTLEPCAHHGRTAPCTDLIIESGIKNVFIGTRDPDTRVNGKGIQKL 122

Query: 118 TLATCHHSPEIYPGISEQRS 137
             +       +  GI ++  
Sbjct: 123 QESG----IVVTTGILKREC 138


>gi|27380142|ref|NP_771671.1| riboflavin biosynthesis protein [Bradyrhizobium japonicum USDA 110]
 gi|27353296|dbj|BAC50296.1| riboflavin biosynthesis protein [Bradyrhizobium japonicum USDA 110]
          Length = 382

 Score = 92.7 bits (230), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 36/154 (23%), Positives = 49/154 (31%), Gaps = 21/154 (13%)

Query: 4   GNVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
              FM  AL   +    R      VGAV V +  I+ R   +         H E  A+R 
Sbjct: 21  DRRFMQLALALGRRGQGRTWPNPAVGAVIVKDGVIVGRGWTQPGGR----PHGEPEALRR 76

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
                         LYVTLEPC        CA A+  A I+R+     +P       G  
Sbjct: 77  AGEAA-----RGATLYVTLEPCSHFGKSPPCADAVIAAGIKRVVAAIEDPNPEVAGQGHA 131

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
               A       +  G+    +       F+  R
Sbjct: 132 RLRAAG----ITVDVGLCAAEAAFDHAGHFRRIR 161


>gi|212703995|ref|ZP_03312123.1| hypothetical protein DESPIG_02048 [Desulfovibrio piger ATCC 29098]
 gi|212672588|gb|EEB33071.1| hypothetical protein DESPIG_02048 [Desulfovibrio piger ATCC 29098]
          Length = 188

 Score = 92.7 bits (230), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 32/99 (32%), Positives = 44/99 (44%), Gaps = 6/99 (6%)

Query: 4   GNVFMSCALEEAQNAALRN-EIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRM 61
               M  A+E A+   L     P GA+      +++S A N     +D T HAE+ A+R 
Sbjct: 28  HRRHMLAAIEAAREGMLSGKGGPFGALITDPAGRVVSVACNEVLASRDCTMHAEVAALRK 87

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
              +     L    LY T  PC MC  AI  +R+  LYY
Sbjct: 88  VGHL----DLRGHTLYATGFPCVMCLGAILWSRVSTLYY 122


>gi|313669033|ref|YP_004049317.1| diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/phosphoribosylaminouracil reductase [Neisseria
           lactamica ST-640]
 gi|313006495|emb|CBN87958.1| putative diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/phosphoribosylaminouracil reductase [Neisseria
           lactamica 020-06]
          Length = 369

 Score = 92.7 bits (230), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 35/159 (22%), Positives = 56/159 (35%), Gaps = 24/159 (15%)

Query: 2   KKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
           +     M  AL+ A       +  P VG V     +I+ +  +          HAE+ A+
Sbjct: 4   ETDISMMQNALKLAALGRFSTSPNPRVGCVIAQGGQIVGQGFHVKAGE----PHAEVHAL 59

Query: 60  RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113
           R    +           +VTLEPC        CA A+  A + R+     +P       G
Sbjct: 60  RQAGEMA-----KGATAFVTLEPCSHYGRTPPCAEALVRAGVSRVVVAMRDPNPLVAGKG 114

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDF---FKERR 149
                 A      E   G+ E  +R++ + F    + RR
Sbjct: 115 LALLEAAGI--KTEC--GLLESEARELNRGFLSRIERRR 149


>gi|242347654|gb|ACS92631.1| conserved hypothetical protein [Triticum aestivum]
          Length = 396

 Score = 92.7 bits (230), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 30/149 (20%), Positives = 57/149 (38%), Gaps = 21/149 (14%)

Query: 4   GNVFMSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
              +M   ++ A+ AA      P VG V V   +++    +     K    HAE+ A+R 
Sbjct: 52  DAHYMRRCVDLARTAAGHTSPNPMVGCVIVREGEVVGEGFH----PKAGQPHAEVFALRD 107

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
              +           YV+LEPC        C  A+  A+I+ +  G ++P       G +
Sbjct: 108 AGDLAEN-----ATAYVSLEPCNHYGRTPPCTEALIKAKIKEVVVGMTDPNPIVASKGIE 162

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDF 144
                  +   ++  G+ E    ++ + +
Sbjct: 163 KLR----NAGIDVRVGVEEALCLRLNEAY 187


>gi|83717489|ref|YP_439477.1| riboflavin biosynthesis protein RibD [Burkholderia thailandensis
           E264]
 gi|257142602|ref|ZP_05590864.1| riboflavin biosynthesis protein RibD [Burkholderia thailandensis
           E264]
 gi|83651314|gb|ABC35378.1| riboflavin biosynthesis protein RibD [Burkholderia thailandensis
           E264]
          Length = 389

 Score = 92.7 bits (230), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 35/152 (23%), Positives = 53/152 (34%), Gaps = 21/152 (13%)

Query: 4   GNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
             + M+ AL  A+           VG V     + +    +R         HAE+ A+R 
Sbjct: 8   DRMHMAHALRLAEQGLYTTHPNPRVGCVIARGAQTLGAGWHRRAGE----PHAEVHALRE 63

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
                  E       YVTLEPC        CA A+  A + R+   A +P       G  
Sbjct: 64  AG-----ERARGATAYVTLEPCAHFGRTPPCANALVAAGVARVVIAARDPFEQVAGRGAA 118

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
               A       +  G+ E ++R++   FF  
Sbjct: 119 RLADAG----IVVEQGLLEAQARELNIGFFSR 146


>gi|326520824|dbj|BAJ92775.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 468

 Score = 92.7 bits (230), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 31/149 (20%), Positives = 58/149 (38%), Gaps = 21/149 (14%)

Query: 4   GNVFMSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
              +M   +E A+ AA      P VG V V   K++    +     K    HAE+ A+R 
Sbjct: 124 DAHYMRRCVELARTAAGHTSPNPMVGCVIVREGKVVGEGFH----PKAGQPHAEVFALRD 179

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
              +           YV+LEPC        C+ A+  A+++ +  G ++P       G +
Sbjct: 180 AGDLAEN-----ATAYVSLEPCNHYGRTPPCSEALIKAKVKEVVVGMTDPNPIVASKGIE 234

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDF 144
                  +   ++  G+ E    ++ + +
Sbjct: 235 KLR----NAGIDVRVGVEEALCLRLNEAY 259


>gi|295131277|ref|YP_003581940.1| riboflavin biosynthesis protein RibD [Propionibacterium acnes
           SK137]
 gi|291375861|gb|ADD99715.1| riboflavin biosynthesis protein RibD [Propionibacterium acnes
           SK137]
 gi|313773159|gb|EFS39125.1| riboflavin biosynthesis protein RibD [Propionibacterium acnes
           HL074PA1]
 gi|313810307|gb|EFS48023.1| riboflavin biosynthesis protein RibD [Propionibacterium acnes
           HL083PA1]
 gi|313830202|gb|EFS67916.1| riboflavin biosynthesis protein RibD [Propionibacterium acnes
           HL007PA1]
 gi|313833124|gb|EFS70838.1| riboflavin biosynthesis protein RibD [Propionibacterium acnes
           HL056PA1]
 gi|314972940|gb|EFT17036.1| riboflavin biosynthesis protein RibD [Propionibacterium acnes
           HL053PA1]
 gi|314975459|gb|EFT19554.1| riboflavin biosynthesis protein RibD [Propionibacterium acnes
           HL045PA1]
 gi|314984254|gb|EFT28346.1| riboflavin biosynthesis protein RibD [Propionibacterium acnes
           HL005PA1]
 gi|315096643|gb|EFT68619.1| riboflavin biosynthesis protein RibD [Propionibacterium acnes
           HL038PA1]
 gi|327325313|gb|EGE67118.1| riboflavin biosynthesis protein RibD [Propionibacterium acnes
           HL096PA2]
 gi|327443828|gb|EGE90482.1| riboflavin biosynthesis protein RibD [Propionibacterium acnes
           HL043PA1]
 gi|327449140|gb|EGE95794.1| riboflavin biosynthesis protein RibD [Propionibacterium acnes
           HL043PA2]
 gi|328761071|gb|EGF74621.1| riboflavin biosynthesis protein RibD [Propionibacterium acnes
           HL099PA1]
          Length = 331

 Score = 92.7 bits (230), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 30/125 (24%), Positives = 48/125 (38%), Gaps = 20/125 (16%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85
           VG V V  +++I +  +R       T HAE+ A+R        +        VTLEPC  
Sbjct: 28  VGCVIVAEDRVIGQGWHR----GAGTPHAEVEALRQAG-----DDARGATAVVTLEPCHH 78

Query: 86  ------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139
                 C+ A+  A I R+    S+P            T     H  E+  G+  + +  
Sbjct: 79  TGRTGPCSHALVDAGIARVVIAQSDPNPVASGGEQWLRT-----HGVEVVTGVLSEEATA 133

Query: 140 IIQDF 144
           +  D+
Sbjct: 134 LNADW 138


>gi|314982172|gb|EFT26265.1| riboflavin biosynthesis protein RibD [Propionibacterium acnes
           HL110PA3]
 gi|315090403|gb|EFT62379.1| riboflavin biosynthesis protein RibD [Propionibacterium acnes
           HL110PA4]
          Length = 331

 Score = 92.7 bits (230), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 30/125 (24%), Positives = 48/125 (38%), Gaps = 20/125 (16%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85
           VG V V  +++I +  +R       T HAE+ A+R        +        VTLEPC  
Sbjct: 28  VGCVIVAEDRVIGQGWHR----GAGTPHAEVEALRQAG-----DDARGATAVVTLEPCHH 78

Query: 86  ------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139
                 C+ A+  A I R+    S+P            T     H  E+  G+  + +  
Sbjct: 79  TGRTGPCSHALVDAGIARVVIAQSDPNPVASGGEQWLRT-----HGVEVVTGVLSEEATA 133

Query: 140 IIQDF 144
           +  D+
Sbjct: 134 LNADW 138


>gi|269302657|gb|ACZ32757.1| riboflavin biosynthesis protein RibD [Chlamydophila pneumoniae
           LPCoLN]
          Length = 376

 Score = 92.7 bits (230), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 36/150 (24%), Positives = 58/150 (38%), Gaps = 23/150 (15%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           ++   FM  A+E  +   +    P   VG V V  N+II    +          HAE LA
Sbjct: 6   EQQLFFMRRAIEIGEKGRITA-PPNPWVGCVVVQENRIIGEGFHAYAGG----PHAEELA 60

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
           I+     +        D+YV+LEPC        CA  +   ++ R++    +P       
Sbjct: 61  IQNASMPI-----SGSDVYVSLEPCSHFGSRPPCANLLIKYKVSRVFVALVDPDPKVAGQ 115

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQ 142
           G      A      ++Y GI E  ++  +Q
Sbjct: 116 GIAMLRQAG----IQVYVGIGESEAQASLQ 141


>gi|215918961|ref|NP_819453.2| guanine deaminase [Coxiella burnetii RSA 493]
 gi|206583846|gb|AAO89967.2| guanine deaminase [Coxiella burnetii RSA 493]
          Length = 168

 Score = 92.7 bits (230), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 30/113 (26%), Positives = 41/113 (36%), Gaps = 22/113 (19%)

Query: 25  PVGAVAV----LNNKIISR--AGNRNRELKDVTAHAEILAIRMGCRILSQEIL------- 71
           P GAV V     + ++       N + +  D TAHAE+  IR   R L+   L       
Sbjct: 14  PFGAVIVQIDDKSGRVFRYWVDHNHSVDWHDPTAHAEMSVIRKAARELNVTDLGHIRKED 73

Query: 72  ---------PEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
                        +Y + EPC MC AAI  A I  L + A+            
Sbjct: 74  SKLSQPSEWSHCVIYSSAEPCPMCMAAIYWAGIHYLVFSATRYDTAAPGVNWD 126


>gi|161525607|ref|YP_001580619.1| riboflavin biosynthesis protein RibD [Burkholderia multivorans ATCC
           17616]
 gi|189349664|ref|YP_001945292.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Burkholderia
           multivorans ATCC 17616]
 gi|160343036|gb|ABX16122.1| riboflavin biosynthesis protein RibD [Burkholderia multivorans ATCC
           17616]
 gi|189333686|dbj|BAG42756.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Burkholderia
           multivorans ATCC 17616]
          Length = 373

 Score = 92.7 bits (230), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 33/154 (21%), Positives = 53/154 (34%), Gaps = 20/154 (12%)

Query: 1   MKKGNVF--MSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56
           M     F  M  AL  A          P VG V V + ++I     +         HAE+
Sbjct: 1   MFSDIDFAHMQRALALAARGMYTTTPNPRVGCVIVKHGEVIGEGHTQPPGQD----HAEV 56

Query: 57  LAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGI 110
            A++          +    +YVTLEPC        CA A+  AR+ ++     +P     
Sbjct: 57  QALKDA--RARGHDVAGSTVYVTLEPCSHFGRTPPCANALIEARVAKVVAAMEDPNPLVS 114

Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
             G      A      ++  G+    + ++   F
Sbjct: 115 GRGLGMLRDAG----IDVRCGLLAHEAGELNIGF 144


>gi|167837547|ref|ZP_02464430.1| riboflavin biosynthesis protein RibD [Burkholderia thailandensis
           MSMB43]
          Length = 374

 Score = 92.7 bits (230), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 32/151 (21%), Positives = 54/151 (35%), Gaps = 18/151 (11%)

Query: 2   KKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
           +     M  AL  A          P VG V V ++ +I     +         HAE+ A+
Sbjct: 4   ESDFTHMQRALALAARGMYTTTPNPRVGCVIVKDDVVIGEGFTQPAGQD----HAEVQAL 59

Query: 60  RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113
           +   R      L +  +YVTLEPC        C+ A+  AR+ ++     +P       G
Sbjct: 60  KDA-RARGN-DLRDATVYVTLEPCSHFGRTPPCSHALIDARVGKVVAAMEDPNPQVSGRG 117

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
                 A      ++  G+    + ++   F
Sbjct: 118 LAMLRDAG----IDVRCGLLAHEAHEMNIGF 144


>gi|325522583|gb|EGD01124.1| pyrimidine deaminase [Burkholderia sp. TJI49]
          Length = 221

 Score = 92.3 bits (229), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 34/154 (22%), Positives = 52/154 (33%), Gaps = 20/154 (12%)

Query: 1   MKKGNVF--MSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56
           M     F  M  AL  A          P VG V V    +I     +     D   HAE+
Sbjct: 1   MFSDIDFAHMQRALALAARGMYTTTPNPRVGCVIVKGGDVIGEGYTQP-AGHD---HAEV 56

Query: 57  LAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGI 110
            A++          +    +YVTLEPC        CA A+  AR+ ++     +P     
Sbjct: 57  QALKDA--RARGHDVAGSTVYVTLEPCSHFGRTPPCANALIEARVAKVVAAMEDPNPQVS 114

Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
             G      A      ++  G+    + ++   F
Sbjct: 115 GRGLGMLRDAG----IDVRCGLLAHEAGELNIGF 144


>gi|218296564|ref|ZP_03497292.1| riboflavin biosynthesis protein RibD [Thermus aquaticus Y51MC23]
 gi|218243106|gb|EED09638.1| riboflavin biosynthesis protein RibD [Thermus aquaticus Y51MC23]
          Length = 377

 Score = 92.3 bits (229), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 33/159 (20%), Positives = 56/159 (35%), Gaps = 25/159 (15%)

Query: 1   MKK-GNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56
           M+     F+  AL+ A+ A      P   VGAV V + +I+    +          HA  
Sbjct: 1   MRDLDERFLRRALQIAERARGHT-HPNPLVGAVVVRDGEIVGEGYHPRAGA----PHA-- 53

Query: 57  LAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGI 110
                     + E      +YV+LEPC        C+ A+  A + R+   A +P     
Sbjct: 54  ---EALALEAAGERARGATVYVSLEPCDHHGRTPPCSLALIRAGVARVVLAARDPNPLAQ 110

Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
               +            +  G+ E+ ++   + FF   R
Sbjct: 111 GGMARLLAA-----GVAVEAGLLEEEAQDQNEAFFTALR 144


>gi|78212460|ref|YP_381239.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Synechococcus sp. CC9605]
 gi|78196919|gb|ABB34684.1| riboflavin biosynthesis protein RibD [Synechococcus sp. CC9605]
          Length = 349

 Score = 92.3 bits (229), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 31/131 (23%), Positives = 48/131 (36%), Gaps = 20/131 (15%)

Query: 26  VGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC- 83
           VGAV +    +++    +         AHAE+ A+R               L VTLEPC 
Sbjct: 21  VGAVVLDCEGRLVGEGFHARAGD----AHAEVGALRQAGDAAQ-----GGTLVVTLEPCC 71

Query: 84  -----TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSR 138
                  C+ A+  A I R+     +P       G +    A      E+  G+  + +R
Sbjct: 72  HHGRTPPCSEAVLRAGIGRVVIALEDPDPRVDGGGIRQLRQAGL----EVISGVLREEAR 127

Query: 139 QIIQDFFKERR 149
           Q  + F    R
Sbjct: 128 QQNRAFLHRVR 138


>gi|294788324|ref|ZP_06753567.1| riboflavin biosynthesis protein RibD [Simonsiella muelleri ATCC
           29453]
 gi|294483755|gb|EFG31439.1| riboflavin biosynthesis protein RibD [Simonsiella muelleri ATCC
           29453]
          Length = 363

 Score = 92.3 bits (229), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 34/157 (21%), Positives = 60/157 (38%), Gaps = 24/157 (15%)

Query: 4   GNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
            +  M  ALE A       +  P VG V     +I+ +  +   +  +   HAE+ A+R 
Sbjct: 9   DHAHMHRALELAWQGRFSTSPNPRVGCVIAHGEQIVGQGFH--VKAGEP--HAEVHALRQ 64

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
              +           YVTLEPC        CA ++  + + R+     +P       G  
Sbjct: 65  AGSLAQ-----GATAYVTLEPCAHYGRTPPCAESLRESGVARVVAAMRDPNPLVAGKGLA 119

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDF---FKERR 149
             T A       +  G+ E ++R++ + F    + +R
Sbjct: 120 ILTAAG----VLVECGLLEHKARELNRGFLSRIERKR 152


>gi|76819539|ref|YP_335244.1| riboflavin biosynthesis protein RibD [Burkholderia pseudomallei
           1710b]
 gi|76584012|gb|ABA53486.1| riboflavin biosynthesis protein RibD [Burkholderia pseudomallei
           1710b]
          Length = 454

 Score = 92.3 bits (229), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 34/152 (22%), Positives = 51/152 (33%), Gaps = 21/152 (13%)

Query: 4   GNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
               M+ AL  A+           VG V     + +    +R         HAE+ A+R 
Sbjct: 67  DRTHMAHALRLAEQGLYTTHPNPRVGCVIARGARTLGAGWHRRAGE----PHAEVHALRE 122

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
                  E       YVTLEPC        CA A+  A + R+   A +P       G  
Sbjct: 123 AG-----ERARGATAYVTLEPCAHFGRTPPCANALVAAGVARVVIAARDPFEQVAGRGAA 177

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
               A       +  G+   ++R++   FF  
Sbjct: 178 RLADAG----IVVEQGLLAAQARELNIGFFSR 205


>gi|119384301|ref|YP_915357.1| riboflavin biosynthesis protein RibD [Paracoccus denitrificans
           PD1222]
 gi|119374068|gb|ABL69661.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Paracoccus denitrificans PD1222]
          Length = 325

 Score = 92.3 bits (229), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 33/147 (22%), Positives = 53/147 (36%), Gaps = 25/147 (17%)

Query: 8   MSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
           M  AL  A+       +   P VG V V +  ++ R   +         HAE +A+    
Sbjct: 1   MRHALALARRGL--GNVWPNPAVGCVLVRDGVVVGRGWTQPGGR----PHAEAMALAQAG 54

Query: 64  RILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFY 117
                        YVTLEPC        CA A+  + + R+    ++P       G    
Sbjct: 55  EAA-----RGATAYVTLEPCAHHGKTPPCAEALVRSGMARVVTALTDPDPRVTGRGHAIL 109

Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDF 144
             A      E+  G+ E  +R++ + F
Sbjct: 110 RAAG----IEVAEGVCEAEAREVQRGF 132


>gi|83859882|ref|ZP_00953402.1| riboflavin biosynthesis protein RibD [Oceanicaulis alexandrii
           HTCC2633]
 gi|83852241|gb|EAP90095.1| riboflavin biosynthesis protein RibD [Oceanicaulis alexandrii
           HTCC2633]
          Length = 195

 Score = 92.3 bits (229), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 32/154 (20%), Positives = 48/154 (31%), Gaps = 21/154 (13%)

Query: 3   KGNVFMSCALEEA--QNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +   +M  AL  A  +         VG + V + +II  A            HAE  A+ 
Sbjct: 9   EDLRYMDTALALAYARLGQTAPNPSVGCIIVRDGRIIGAAATAPGGR----PHAEPQALE 64

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
                          +YVTLEPC        CA A+  A    +     +P       G 
Sbjct: 65  QAGA-----RAEGATVYVTLEPCAHYGKTPPCAEALIAAHPAEVVIACRDPFEHVAGRGM 119

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKER 148
                A       +  G+ E  +  +   FF+  
Sbjct: 120 TMLADAG----IAVLEGVREADAIALNAGFFERL 149


>gi|257066652|ref|YP_003152908.1| riboflavin biosynthesis protein RibD [Anaerococcus prevotii DSM
           20548]
 gi|256798532|gb|ACV29187.1| riboflavin biosynthesis protein RibD [Anaerococcus prevotii DSM
           20548]
          Length = 357

 Score = 92.3 bits (229), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 36/157 (22%), Positives = 63/157 (40%), Gaps = 32/157 (20%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56
           M   N+ M    + A+  A   ++   P VGA+ + N +II++  +++    D   HAEI
Sbjct: 1   MNYDNL-MRECFDLARKGA--GKVLTNPMVGAILIKNGEIIAKGYHKSN-TCD---HAEI 53

Query: 57  LAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGA--SNPKGG 108
                      +E      L V LEPC        C   +   +++R+      +NPK  
Sbjct: 54  DCFNNL-----KESAEGATLIVNLEPCSHFGKHPPCVDEVIKRKVKRVVIANLDTNPKVD 108

Query: 109 GIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
           G+    +           E+  G+ E   R++ + FF
Sbjct: 109 GLSKLKEA--------GIEVITGVLEDEGRKLNEKFF 137


>gi|153005591|ref|YP_001379916.1| riboflavin biosynthesis protein RibD [Anaeromyxobacter sp. Fw109-5]
 gi|152029164|gb|ABS26932.1| riboflavin biosynthesis protein RibD [Anaeromyxobacter sp. Fw109-5]
          Length = 401

 Score = 92.3 bits (229), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 37/154 (24%), Positives = 60/154 (38%), Gaps = 24/154 (15%)

Query: 7   FMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           FM  A+ EA     R      VGAV V   ++++R  +          HAE++       
Sbjct: 34  FMRAAVREATKGLGRTSPNPAVGAVLVKGGRVVARGHHARAGG----PHAEVV-----AL 84

Query: 65  ILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
             +       DLY TLEPC        C+ A+  A +RR++ G+++P       G     
Sbjct: 85  RAAGARARGADLYTTLEPCDHFGRTPPCSVAVLEAGVRRVFVGSADPNPLVNGRGVARLR 144

Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFF---KERR 149
                   E+  G+  +   ++   +F    ERR
Sbjct: 145 EGG----VEVVTGVLRETCDELNAHWFTFITERR 174


>gi|328951151|ref|YP_004368486.1| riboflavin biosynthesis protein RibD [Marinithermus hydrothermalis
           DSM 14884]
 gi|328451475|gb|AEB12376.1| riboflavin biosynthesis protein RibD [Marinithermus hydrothermalis
           DSM 14884]
          Length = 390

 Score = 92.3 bits (229), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 36/151 (23%), Positives = 55/151 (36%), Gaps = 24/151 (15%)

Query: 4   GNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
              +M  AL+ A+ A      P   VGAV V + +I+    +    L     HAE+ A+R
Sbjct: 5   DERYMRRALQLAERARGHT-HPNPLVGAVVVKDGRIVGEGYHPRAGL----PHAEVFALR 59

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
                          +YVTLEPC        C  A+  A + R+   A +P         
Sbjct: 60  QAGEAA-----RGATVYVTLEPCNHHGRTPPCTTALLEAGVARVVVAARDPNPKAQGGLE 114

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
           +            +  G+ E  +R   + FF
Sbjct: 115 RLAQA-----GVAVQWGVLEAEARAQNEVFF 140


>gi|293603326|ref|ZP_06685754.1| riboflavin biosynthesis protein RibD [Achromobacter piechaudii ATCC
           43553]
 gi|292818236|gb|EFF77289.1| riboflavin biosynthesis protein RibD [Achromobacter piechaudii ATCC
           43553]
          Length = 383

 Score = 92.3 bits (229), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 36/154 (23%), Positives = 54/154 (35%), Gaps = 18/154 (11%)

Query: 2   KKGNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
                +M  AL  A++          VG V V + +++     +         HAEI A+
Sbjct: 7   SDDIFWMRRALALAESVLYTTAPNPRVGCVIVRDGRMLGEGATQPPGG----PHAEIRAL 62

Query: 60  RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113
           R       QE +    LYVTLEPC        C  A+  AR  R+     +P       G
Sbjct: 63  RDA--ESRQEAVEGATLYVTLEPCSHFGRTPPCVDAVLAARPARVVVAIGDPNPLVNGQG 120

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
                 A      ++  G+ EQ +  +   F   
Sbjct: 121 LARLRAAG----IQVTTGVCEQEALALNAGFISR 150


>gi|254368626|ref|ZP_04984642.1| predicted protein [Francisella tularensis subsp. holarctica
          FSC022]
 gi|157121529|gb|EDO65720.1| predicted protein [Francisella tularensis subsp. holarctica
          FSC022]
          Length = 64

 Score = 92.3 bits (229), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 24/59 (40%), Positives = 35/59 (59%)

Query: 2  KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +   FM  A ++A  A    E+P+GAV V +++II +  N+   L D TAHAEIL +R
Sbjct: 6  DQDIFFMQKAYQQALLAYQAGEVPIGAVLVRDDQIIVQNFNQTIGLNDPTAHAEILVLR 64


>gi|94311620|ref|YP_584830.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase /
           diaminohydroxyphosphoribosylaminopyrimidine deaminase
           [Cupriavidus metallidurans CH34]
 gi|93355472|gb|ABF09561.1| fused diaminohydroxyphosphoribosylaminopyrimidine deaminase ;
           5-amino-6-(5-phosphoribosylamino) uracil reductase
           [Cupriavidus metallidurans CH34]
          Length = 373

 Score = 92.3 bits (229), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 35/148 (23%), Positives = 50/148 (33%), Gaps = 18/148 (12%)

Query: 8   MSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M  AL  A          P VG V + +  +I     +         HAEI A++     
Sbjct: 10  MEQALALAARGMFTTTPNPRVGCVLMKDGVVIGEGYTQPAGQD----HAEIQAMKDAISR 65

Query: 66  LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
                      YVTLEPC        CA A+  A I R+     +P       G Q    
Sbjct: 66  GHDP--AGATAYVTLEPCSHFGRTPPCADALVRAGIARVVAAMEDPNPTVSGRGLQRLRD 123

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKE 147
           A      ++  G+ E+ +R +   F   
Sbjct: 124 AG----IDVRCGLLEKEARDLNIGFISR 147


>gi|260772212|ref|ZP_05881128.1| diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Vibrio metschnikovii CIP 69.14]
 gi|260611351|gb|EEX36554.1| diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Vibrio metschnikovii CIP 69.14]
          Length = 369

 Score = 92.3 bits (229), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 34/152 (22%), Positives = 53/152 (34%), Gaps = 21/152 (13%)

Query: 4   GNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
               M+ A++ AQ         P VG V     +I+    +          HAE+ A+RM
Sbjct: 9   DYQMMARAIQLAQRGRFTTAPNPKVGCVITQQGRIVGEGFHYRAGQ----PHAEVHALRM 64

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
                 +E       YVTLEPC        CA  +  A + ++     +P       G  
Sbjct: 65  A-----KEYARGATAYVTLEPCSHYGRTPPCAEGLIQAGVAKVICAMQDPNPQVSGRGIA 119

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
               A      E+  G+ E  ++ +   F K 
Sbjct: 120 MLREAG----IEVEVGLLEADAKVLNPAFIKR 147


>gi|160895274|ref|ZP_02076046.1| hypothetical protein CLOL250_02834 [Clostridium sp. L2-50]
 gi|156863153|gb|EDO56584.1| hypothetical protein CLOL250_02834 [Clostridium sp. L2-50]
          Length = 336

 Score = 92.3 bits (229), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 30/122 (24%), Positives = 44/122 (36%), Gaps = 19/122 (15%)

Query: 30  AVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC------ 83
            V + +II    +R         HAE  A          E     ++YVTLEPC      
Sbjct: 2   IVKDGRIIGEGYHRRYGEL----HAERDAF-----AHLTEDAAGAEMYVTLEPCCHYGKQ 52

Query: 84  TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQD 143
             C  AI   +I R+Y G+ +P       G Q    A      E+   + ++    +   
Sbjct: 53  PPCVNAIIEHKISRVYVGSDDPNALVSGKGYQILRDAG----IEVITHVLKEECDSLNPV 108

Query: 144 FF 145
           FF
Sbjct: 109 FF 110


>gi|284051945|ref|ZP_06382155.1| riboflavin biosynthesis protein [Arthrospira platensis str. Paraca]
 gi|291567830|dbj|BAI90102.1| riboflavin biosynthesis protein RibD [Arthrospira platensis
           NIES-39]
          Length = 387

 Score = 92.3 bits (229), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 34/149 (22%), Positives = 51/149 (34%), Gaps = 21/149 (14%)

Query: 4   GNVFMSCALEEAQNAA-LRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
               M   L  A+         P VG V V + KII    +          HAEI A+R 
Sbjct: 13  DRQMMRYCLNLAKEGLGKTAPNPLVGCVIVRDQKIIGEGYH----PGPGQPHAEIFALRS 68

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
              +          +YV LEPC        C+ A+  A + ++  G  +P       G  
Sbjct: 69  AGELA-----RGATVYVNLEPCNHYGRTPPCSEALIKAGVAKVVAGMVDPNPLVGGQGIA 123

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDF 144
               A      E+  G+ E    ++ + F
Sbjct: 124 KLCEAG----IEVIVGVEESACLKLNEAF 148


>gi|171057779|ref|YP_001790128.1| CMP/dCMP deaminase zinc-binding [Leptothrix cholodnii SP-6]
 gi|170775224|gb|ACB33363.1| CMP/dCMP deaminase zinc-binding [Leptothrix cholodnii SP-6]
          Length = 166

 Score = 92.3 bits (229), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 32/101 (31%), Positives = 43/101 (42%), Gaps = 7/101 (6%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNN--KIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           +  A + A+ A      P GA+ V  +   ++   GN      D   HAE +  R   R 
Sbjct: 18  LRGANQIARAALAAGHHPFGALLVAADHRTVLLSQGNL-----DSVNHAEAVLAREAARR 72

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPK 106
            S   L +  LY T+EPC MCA     A I RL +G S   
Sbjct: 73  FSPAELWDCTLYTTVEPCCMCAGTQYWAHIGRLVFGMSEAD 113


>gi|149927761|ref|ZP_01916013.1| Riboflavin biosynthesis protein RibD:Riboflavin-specific deaminase,
           C-terminal [Limnobacter sp. MED105]
 gi|149823587|gb|EDM82817.1| Riboflavin biosynthesis protein RibD:Riboflavin-specific deaminase,
           C-terminal [Limnobacter sp. MED105]
          Length = 377

 Score = 92.3 bits (229), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 36/153 (23%), Positives = 50/153 (32%), Gaps = 18/153 (11%)

Query: 3   KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
               +M  AL  A          P VG V V +   I+   +          HAE+ AI 
Sbjct: 7   TDEHWMQHALNLAWKGQYSTTPNPRVGCVFVRDGVAIAEGFHAKAGEG----HAEVQAI- 61

Query: 61  MGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGT 114
                     L     YVTLEPC        CA A+    + R+     +P       G 
Sbjct: 62  -ADSRARGVSLAGSTAYVTLEPCAHHGRTGPCAEALVATGVARVVAAVLDPNPLVSGKGM 120

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
                A      E   G+  +++R I + FF  
Sbjct: 121 AILQAAG----IETAHGVLIEQARWINRGFFSR 149


>gi|260436195|ref|ZP_05790165.1| riboflavin biosynthesis protein RibD [Synechococcus sp. WH 8109]
 gi|260414069|gb|EEX07365.1| riboflavin biosynthesis protein RibD [Synechococcus sp. WH 8109]
          Length = 354

 Score = 92.3 bits (229), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 31/131 (23%), Positives = 48/131 (36%), Gaps = 20/131 (15%)

Query: 26  VGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC- 83
           VGAV +    +++    +         AHAE+ A+R               L VTLEPC 
Sbjct: 26  VGAVVLDRQGRLVGEGFHARAGD----AHAEVGALRQAGDAA-----RGGTLVVTLEPCC 76

Query: 84  -----TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSR 138
                  C+ A+  A I R+     +P       G +    A      E+  G+  + +R
Sbjct: 77  HHGRTPPCSEAVLSAGIGRVVIALEDPDPRVDGGGIRQLREAGL----EVISGVLREEAR 132

Query: 139 QIIQDFFKERR 149
           Q  + F    R
Sbjct: 133 QQNRAFLHRVR 143


>gi|257138273|ref|ZP_05586535.1| riboflavin biosynthesis protein RibD [Burkholderia thailandensis
           E264]
          Length = 369

 Score = 92.3 bits (229), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 33/145 (22%), Positives = 53/145 (36%), Gaps = 18/145 (12%)

Query: 8   MSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M  AL  A          P VG V V ++ +I     +         HAE+ A++   R 
Sbjct: 1   MQRALALAARGMYTTTPNPRVGCVIVKDDVVIGEGFTQPAGQD----HAEVQALKDA-RA 55

Query: 66  LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
                L +  +YVTLEPC        CA A+  AR+ ++     +P       G      
Sbjct: 56  RGN-DLRDATVYVTLEPCSHFGRTPPCAHALIDARVGKVVAAMEDPNPQVSGRGLAMLRD 114

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDF 144
           A      ++  G+    + ++   F
Sbjct: 115 AG----IDVRCGLLAHEAHEMNIGF 135


>gi|15229953|ref|NP_187181.1| cytidine/deoxycytidylate deaminase family protein [Arabidopsis
           thaliana]
 gi|6729040|gb|AAF27036.1|AC009177_26 unknown protein [Arabidopsis thaliana]
 gi|332640696|gb|AEE74217.1| Cytidine/deoxycytidylate deaminase-like protein [Arabidopsis
           thaliana]
          Length = 113

 Score = 91.9 bits (228), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 29/71 (40%), Positives = 40/71 (56%)

Query: 48  KDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKG 107
           KD TAHAE++AIR  C+ L++  L E ++Y + EPC MC  AI L+R++RL Y A     
Sbjct: 6   KDPTAHAEVIAIREACKKLNEIKLSECEIYASCEPCPMCFGAIHLSRLKRLVYEAKVEAA 65

Query: 108 GGIENGTQFYT 118
             I        
Sbjct: 66  LAIGFNRILAD 76


>gi|326315894|ref|YP_004233566.1| CMP/dCMP deaminase zinc-binding protein [Acidovorax avenae subsp.
           avenae ATCC 19860]
 gi|323372730|gb|ADX44999.1| CMP/dCMP deaminase zinc-binding protein [Acidovorax avenae subsp.
           avenae ATCC 19860]
          Length = 177

 Score = 91.9 bits (228), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 30/97 (30%), Positives = 39/97 (40%), Gaps = 7/97 (7%)

Query: 10  CALEEAQNAALRNEIPVGAVAVLNNK--IISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
            A   A+ A      P GA+ V  +   +++  GN      D   HAE    R       
Sbjct: 31  RADAVARRAMDAGRHPFGALLVAPDGDTVLAEQGN-----IDTVNHAESTLAREAAARWP 85

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASN 104
            ++L    L  T EPC MCA  I  A I R+ YGA  
Sbjct: 86  ADLLRGCTLVTTFEPCAMCAGTIYWAGIGRVLYGAEE 122


>gi|325918412|ref|ZP_08180540.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Xanthomonas
           vesicatoria ATCC 35937]
 gi|325535374|gb|EGD07242.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Xanthomonas
           vesicatoria ATCC 35937]
          Length = 364

 Score = 91.9 bits (228), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 34/149 (22%), Positives = 56/149 (37%), Gaps = 21/149 (14%)

Query: 4   GNVFMSCALEEAQN-AALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
            + +M+ AL  A+  A      P VG V V +   +    ++         HAE+     
Sbjct: 7   DHRWMAQALRLAERGAYTTRPNPMVGCVIVRDGVCVGEGFHQRAGG----PHAEVF---- 58

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
                +  +      YVTLEPC        CA A+  A + R+    ++P       G  
Sbjct: 59  -ALRAAGALARGATAYVTLEPCAHYGRTPPCALALIEAGVARVVAAMADPFPQVNGGGFA 117

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDF 144
               A      E+  G+ + ++RQ+ Q F
Sbjct: 118 LLREAG----IEVVSGVLQAQARQLNQGF 142


>gi|325000060|ref|ZP_08121172.1| cytosine/adenosine deaminase [Pseudonocardia sp. P1]
          Length = 158

 Score = 91.9 bits (228), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 27/103 (26%), Positives = 46/103 (44%), Gaps = 2/103 (1%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKII-SRAGNRNRELKDVTAHAEILAIR 60
           ++  V +   +E A+ A    + P G+V V  + ++ +   NR     D T H E    R
Sbjct: 3   EQDRVHLRRCVELAEQALGAGDEPFGSVLVDASGVVRAEDRNRV-AGGDPTRHPEFELAR 61

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
               +L+        +Y + E C MCAAA +   + R+ Y +S
Sbjct: 62  RATELLTPGERAGATVYTSGEHCPMCAAAHAWVGLGRIVYASS 104


>gi|126440570|ref|YP_001060025.1| riboflavin biosynthesis protein RibD [Burkholderia pseudomallei
           668]
 gi|167912128|ref|ZP_02499219.1| riboflavin biosynthesis protein RibD [Burkholderia pseudomallei
           112]
 gi|217420854|ref|ZP_03452359.1| riboflavin biosynthesis protein RibD [Burkholderia pseudomallei
           576]
 gi|254180983|ref|ZP_04887581.1| riboflavin biosynthesis protein RibD [Burkholderia pseudomallei
           1655]
 gi|254191828|ref|ZP_04898331.1| riboflavin biosynthesis protein RibD [Burkholderia pseudomallei
           Pasteur 52237]
 gi|126220063|gb|ABN83569.1| riboflavin biosynthesis protein RibD [Burkholderia pseudomallei
           668]
 gi|157939499|gb|EDO95169.1| riboflavin biosynthesis protein RibD [Burkholderia pseudomallei
           Pasteur 52237]
 gi|184211522|gb|EDU08565.1| riboflavin biosynthesis protein RibD [Burkholderia pseudomallei
           1655]
 gi|217396266|gb|EEC36283.1| riboflavin biosynthesis protein RibD [Burkholderia pseudomallei
           576]
          Length = 380

 Score = 91.9 bits (228), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 32/151 (21%), Positives = 53/151 (35%), Gaps = 18/151 (11%)

Query: 2   KKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
           +     M  AL  A          P VG V V ++ +I     +         HAE+ A+
Sbjct: 4   ESDFTHMQRALALAARGMYTTTPNPRVGCVIVKDDVVIGEGFTQPAGQD----HAEVQAL 59

Query: 60  RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113
           +   R      L +  +YVTLEPC        CA  +  AR+ ++     +P       G
Sbjct: 60  KDA-RARGN-DLRDATVYVTLEPCSHFGRTPPCAHTLIDARVGKVVAAMEDPNPQVSGRG 117

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
                 A      ++  G+    + ++   F
Sbjct: 118 LAMLRDAG----IDVRCGLLAHEAHEMNIGF 144


>gi|320102303|ref|YP_004177894.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Isosphaera
           pallida ATCC 43644]
 gi|319749585|gb|ADV61345.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Isosphaera
           pallida ATCC 43644]
          Length = 387

 Score = 91.9 bits (228), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 41/149 (27%), Positives = 60/149 (40%), Gaps = 21/149 (14%)

Query: 8   MSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M  AL  A+      E  P VGA+ V   +++ R  +R         HAE+ A+R     
Sbjct: 1   MRLALALAERGRGHVEPNPMVGALIVRGGEVVGRGWHRRFGG----PHAEVEALRS---- 52

Query: 66  LSQEIL-PEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
           LS   L     L+VTLEPC        C  AI  A I R+    ++P       G     
Sbjct: 53  LSDPALARGATLFVTLEPCCHVGKTPPCTQAILEAGITRVVAAMADPFPKVAGGGLAALR 112

Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKE 147
            A      E+  G+ E  +R++   + K+
Sbjct: 113 AAG----VEVCHGLEETAARRLNAAYLKQ 137


>gi|86147437|ref|ZP_01065749.1| Pyrimidine reductase, riboflavin biosynthesis [Vibrio sp. MED222]
 gi|85834730|gb|EAQ52876.1| Pyrimidine reductase, riboflavin biosynthesis [Vibrio sp. MED222]
          Length = 364

 Score = 91.9 bits (228), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 34/149 (22%), Positives = 55/149 (36%), Gaps = 22/149 (14%)

Query: 8   MSCALEEAQNA-ALRNEIP-VGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           MS A++ A+         P VG V V  + +I+    +          HAE+ A+RM   
Sbjct: 2   MSRAIQLAKRGIYTTAPNPNVGCVIVQTDGQIVGEGFHAKAGE----PHAEVHAMRMAGD 57

Query: 65  ILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
                       YVTLEPC        CA  +  A++ ++     +P       G +   
Sbjct: 58  KA-----KGATAYVTLEPCSHYGRTPPCAEGLIKAQVAKVICAMQDPNPKVAGRGIKMLR 112

Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKE 147
            A      ++  G+ EQ +  +   F K 
Sbjct: 113 DAG----IDVEIGLLEQDALDLNPAFIKR 137


>gi|92114703|ref|YP_574631.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Chromohalobacter salexigens DSM 3043]
 gi|91797793|gb|ABE59932.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Chromohalobacter salexigens DSM 3043]
          Length = 380

 Score = 91.9 bits (228), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 36/150 (24%), Positives = 55/150 (36%), Gaps = 21/150 (14%)

Query: 8   MSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M+ AL+ A++     +  P VG V V   +I+    +          HAE+ A+R     
Sbjct: 10  MARALQLARHGCYTTHPNPRVGCVVVNAGRIVGEGYHAYAGG----PHAEVHALREAGDA 65

Query: 66  LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
                     +YVTLEPC        CA A+  A +RR+     +P       G      
Sbjct: 66  A-----AGATVYVTLEPCSHHGRTPPCAQALIDAGVRRVVVAMVDPNPQVAGRGVAMLRE 120

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
           A      E+  G+    +  +   F K  R
Sbjct: 121 AG----IEVDVGLLATDAEALNVGFVKRMR 146


>gi|311693383|gb|ADP96256.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino) uracil
           reductase [marine bacterium HP15]
          Length = 371

 Score = 91.9 bits (228), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 30/154 (19%), Positives = 50/154 (32%), Gaps = 21/154 (13%)

Query: 2   KKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
            +    M+ A++ A       +  P VG V    + ++    +         AHAE  A+
Sbjct: 4   NRDRAMMARAVQLAWRGRYSTHPNPRVGCVIARGDLVLGEGWHERAGE----AHAETRAL 59

Query: 60  RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113
                            YVTLEPC        CA A+  A +  +Y    +P       G
Sbjct: 60  SQAG-----PDARGATAYVTLEPCSHFGRTPPCARALIDAGVAHVYAATKDPNPSVSGRG 114

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
                 A       +  G+  + + ++   F K 
Sbjct: 115 LDMLREAG----IRVTEGLLAEEAARLNPGFMKR 144


>gi|119486672|ref|XP_001262322.1| hypothetical protein NFIA_028560 [Neosartorya fischeri NRRL 181]
 gi|119410479|gb|EAW20425.1| hypothetical protein NFIA_028560 [Neosartorya fischeri NRRL 181]
          Length = 106

 Score = 91.9 bits (228), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 28/91 (30%), Positives = 49/91 (53%), Gaps = 5/91 (5%)

Query: 64  RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123
           R   + +L   DLYVT+EPC MCA+A+   +IR +Y+G +N + GG  +    ++  T  
Sbjct: 3   RSHPKSLLRSTDLYVTVEPCVMCASALRQYQIRAVYFGCANDRFGGTGSILSLHSDFTID 62

Query: 124 HSPEIYPGISEQRSRQIIQDFF-----KERR 149
               +Y G+  + +  +++ F+     K RR
Sbjct: 63  PPYPVYGGLFRKEAIMLLRRFYIQENEKGRR 93


>gi|307211478|gb|EFN87584.1| tRNA-specific adenosine deaminase-like protein 3 [Harpegnathos
           saltator]
          Length = 428

 Score = 91.9 bits (228), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 20/75 (26%), Positives = 41/75 (54%)

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
                +     +++  EPC +CA A+  +R+ R++YGA+NP+ G + +    +T+   +H
Sbjct: 342 KCGPYLCTGYWVFLLTEPCPLCAMALLHSRVARVFYGAANPRVGVLGSRAILHTMPGLNH 401

Query: 125 SPEIYPGISEQRSRQ 139
              ++ GI E+  R+
Sbjct: 402 RYRVWSGILERECRR 416


>gi|134096905|ref|YP_001102566.1| cytidine/deoxycytidylate deaminase, zinc-binding region
           [Saccharopolyspora erythraea NRRL 2338]
 gi|291006653|ref|ZP_06564626.1| cytidine/deoxycytidylate deaminase, zinc-binding region
           [Saccharopolyspora erythraea NRRL 2338]
 gi|133909528|emb|CAL99640.1| cytidine/deoxycytidylate deaminase, zinc-binding region
           [Saccharopolyspora erythraea NRRL 2338]
          Length = 159

 Score = 91.9 bits (228), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 27/146 (18%), Positives = 56/146 (38%), Gaps = 9/146 (6%)

Query: 1   MKKGNV-FMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILA 58
           M   ++  +  A+E +  A    + P G++ V  +  +++   N  R  +D++AH E+  
Sbjct: 1   MTDDDLRHLRRAIELSARARESGDEPFGSLLVGPDGAVLAEDVNTVRTDRDISAHPELKL 60

Query: 59  IRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPK----GGGIENGT 114
                R L         +Y + E C MC+AA+  + + RL +     +     G    G 
Sbjct: 61  AVWAARHLDPATSAATTMYTSCENCAMCSAAMVSSGVGRLVFALDGRRLASFRGEQRPGL 120

Query: 115 QFYT---LATCHHSPEIYPGISEQRS 137
                   A    +  +   +  + +
Sbjct: 121 DLPAADVFARASRTIAVEGPLLAEEA 146


>gi|167577925|ref|ZP_02370799.1| riboflavin biosynthesis protein RibD [Burkholderia thailandensis
           TXDOH]
          Length = 195

 Score = 91.9 bits (228), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 35/152 (23%), Positives = 53/152 (34%), Gaps = 21/152 (13%)

Query: 4   GNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
             + M+ AL  A+           VG V     + +    +R         HAE+ A+R 
Sbjct: 8   DRMHMAHALRLAEQGLYTTHPNPRVGCVIARGAQALGAGWHRRAGE----PHAEVHALRE 63

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
                  E       YVTLEPC        CA A+  A + R+   A +P       G  
Sbjct: 64  AG-----ERARGATAYVTLEPCAHFGRTPPCANALVAAGVARVVIAARDPFEQVAGRGAA 118

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
               A       +  G+ E ++R++   FF  
Sbjct: 119 RLADAG----IVVEQGLLEAQARELNIGFFSR 146


>gi|121595392|ref|YP_987288.1| CMP/dCMP deaminase [Acidovorax sp. JS42]
 gi|120607472|gb|ABM43212.1| CMP/dCMP deaminase, zinc-binding protein [Acidovorax sp. JS42]
          Length = 170

 Score = 91.9 bits (228), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 37/161 (22%), Positives = 57/161 (35%), Gaps = 21/161 (13%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNK--IISRAGNRNRELKDVTAHAEILA 58
           M K    +  +   AQ A      P GAV V  ++  ++    N      D   HAE   
Sbjct: 18  MLKH---LRRSNAVAQRAVSLGHHPFGAVLVGPDQETVLLEQCN-----IDTVNHAESTL 69

Query: 59  IRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG--------- 109
            R+     + E L    LY  +EPC MCA     A I R+ YG +  +            
Sbjct: 70  ARVAATNFTPEFLWGCTLYTAVEPCCMCAGTAYWANIGRVVYGMTEAQLLAETGSHAENP 129

Query: 110 IENGTQFYTLATCHHSPEIYPGISE--QRSRQIIQDFFKER 148
             +    Y    C    E+   + E  + +  + + F+  R
Sbjct: 130 TMSVPSRYVFDHCQKPVELIGPVPEIAEETVAMQRAFWASR 170


>gi|15618780|ref|NP_225066.1| riboflavin deaminase [Chlamydophila pneumoniae CWL029]
 gi|15836404|ref|NP_300928.1| riboflavin deaminase [Chlamydophila pneumoniae J138]
 gi|16752168|ref|NP_445535.1| riboflavin-specific deaminase [Chlamydophila pneumoniae AR39]
 gi|33242231|ref|NP_877172.1| riboflavin-specific deaminase [Chlamydophila pneumoniae TW-183]
 gi|6225949|sp|Q9Z735|RIBD_CHLPN RecName: Full=Riboflavin biosynthesis protein RibD; Includes:
           RecName:
           Full=Diaminohydroxyphosphoribosylaminopyrimidine
           deaminase; Short=DRAP deaminase; AltName:
           Full=Riboflavin-specific deaminase; Includes: RecName:
           Full=5-amino-6-(5-phosphoribosylamino)uracil reductase;
           AltName: Full=HTP reductase
 gi|4377188|gb|AAD19009.1| Riboflavin Deaminase [Chlamydophila pneumoniae CWL029]
 gi|7189911|gb|AAF38776.1| riboflavin-specific deaminase [Chlamydophila pneumoniae AR39]
 gi|8979245|dbj|BAA99079.1| riboflavin deaminase [Chlamydophila pneumoniae J138]
 gi|33236742|gb|AAP98829.1| riboflavin-specific deaminase [Chlamydophila pneumoniae TW-183]
          Length = 376

 Score = 91.9 bits (228), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 36/150 (24%), Positives = 58/150 (38%), Gaps = 23/150 (15%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           ++   FM  A+E  +   +    P   VG V V  N+II    +          HAE LA
Sbjct: 6   EQQLFFMRRAIEIGEKGRITA-PPNPWVGCVVVQENRIIGEGFHAYAGG----PHAEELA 60

Query: 59  IRMGCRILSQEILPEVDLYVTLEP------CTMCAAAISLARIRRLYYGASNPKGGGIEN 112
           I+     +        D+YV+LEP      C  CA  +   ++ R++    +P       
Sbjct: 61  IQNASMPI-----SGSDVYVSLEPCSHFGSCPPCANLLIKHKVSRVFVALVDPDPKVAGQ 115

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQ 142
           G      A      ++Y GI E  ++  +Q
Sbjct: 116 GIAMLRQAG----IQVYVGIGESEAQASLQ 141


>gi|149909528|ref|ZP_01898182.1| putative riboflavin deaminase [Moritella sp. PE36]
 gi|149807433|gb|EDM67384.1| putative riboflavin deaminase [Moritella sp. PE36]
          Length = 144

 Score = 91.9 bits (228), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 35/140 (25%), Positives = 52/140 (37%), Gaps = 21/140 (15%)

Query: 3   KGNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
               FM  ALE ++ A    R   PVG V V +N I+S    +         HAE  AI 
Sbjct: 5   NDEKFMLRALELSKLALPNCRPNPPVGCVLVKDNIIVSEGYTQAPGQH----HAEAQAIA 60

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
                     L ++  YVTLEPC        CA  ++   I+R+     +P       G 
Sbjct: 61  NYGAA-----LNDITAYVTLEPCSFVGRTPSCAHTLAGLNIKRVVVATVDPDPRNSGKGL 115

Query: 115 QFYTLATCHHSPEIYPGISE 134
                   +   ++  G+ +
Sbjct: 116 SVLR----NAGIDVEVGVCQ 131


>gi|167895478|ref|ZP_02482880.1| riboflavin biosynthesis protein RibD [Burkholderia pseudomallei
           7894]
 gi|167920101|ref|ZP_02507192.1| riboflavin biosynthesis protein RibD [Burkholderia pseudomallei
           BCC215]
 gi|237813427|ref|YP_002897878.1| riboflavin biosynthesis protein RibD [Burkholderia pseudomallei
           MSHR346]
 gi|237504754|gb|ACQ97072.1| riboflavin biosynthesis protein RibD [Burkholderia pseudomallei
           MSHR346]
          Length = 378

 Score = 91.9 bits (228), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 32/151 (21%), Positives = 53/151 (35%), Gaps = 18/151 (11%)

Query: 2   KKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
           +     M  AL  A          P VG V V ++ +I     +         HAE+ A+
Sbjct: 4   ESDFTHMQRALALAARGMYTTTPNPRVGCVIVKDDVVIGEGFTQPAGQD----HAEVQAL 59

Query: 60  RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113
           +   R      L +  +YVTLEPC        CA  +  AR+ ++     +P       G
Sbjct: 60  KDA-RARGN-DLRDATVYVTLEPCSHFGRTPPCAHTLIDARVGKVVAAMEDPNPQVSGRG 117

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
                 A      ++  G+    + ++   F
Sbjct: 118 LAMLRDAG----IDVRCGLLAHEAHEMNIGF 144


>gi|170725743|ref|YP_001759769.1| riboflavin biosynthesis protein RibD [Shewanella woodyi ATCC 51908]
 gi|169811090|gb|ACA85674.1| riboflavin biosynthesis protein RibD [Shewanella woodyi ATCC 51908]
          Length = 379

 Score = 91.9 bits (228), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 33/153 (21%), Positives = 56/153 (36%), Gaps = 17/153 (11%)

Query: 3   KGNVFMSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +    MS A++ A+      +  P VG V   + +I+    +   +      HAE+ A+ 
Sbjct: 6   EDIEMMSRAIKLARQGLYTTQPNPCVGCVVTKDGQILGEGFH--IKAGGP--HAEVHALA 61

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           M     S         YVTLEPC        CA A+   ++ R+     +P       G 
Sbjct: 62  MA-NSDSNLGAKGATAYVTLEPCSHYGRTPPCAEALIHNKLARVVVAVEDPNPQVCGRGI 120

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
                A      ++  G+ +  + +I   F K 
Sbjct: 121 AMLRDAG----IQVDVGLLQDEAYKINPGFMKR 149


>gi|53720234|ref|YP_109220.1| multifunctional riboflavin biosynthetic protein [deaminase,
           reductase [Burkholderia pseudomallei K96243]
 gi|76810186|ref|YP_334473.1| riboflavin biosynthesis protein RibD [Burkholderia pseudomallei
           1710b]
 gi|126453712|ref|YP_001067304.1| riboflavin biosynthesis protein RibD [Burkholderia pseudomallei
           1106a]
 gi|134280288|ref|ZP_01766999.1| riboflavin biosynthesis protein RibD [Burkholderia pseudomallei
           305]
 gi|167720794|ref|ZP_02404030.1| riboflavin biosynthesis protein RibD [Burkholderia pseudomallei
           DM98]
 gi|167739778|ref|ZP_02412552.1| riboflavin biosynthesis protein RibD [Burkholderia pseudomallei 14]
 gi|167825410|ref|ZP_02456881.1| riboflavin biosynthesis protein RibD [Burkholderia pseudomallei 9]
 gi|167846901|ref|ZP_02472409.1| riboflavin biosynthesis protein RibD [Burkholderia pseudomallei
           B7210]
 gi|167903861|ref|ZP_02491066.1| riboflavin biosynthesis protein RibD [Burkholderia pseudomallei
           NCTC 13177]
 gi|226193754|ref|ZP_03789356.1| riboflavin biosynthesis protein RibD [Burkholderia pseudomallei
           Pakistan 9]
 gi|242314762|ref|ZP_04813778.1| riboflavin biosynthesis protein RibD [Burkholderia pseudomallei
           1106b]
 gi|254196130|ref|ZP_04902555.1| riboflavin biosynthesis protein RibD [Burkholderia pseudomallei
           S13]
 gi|254259958|ref|ZP_04951012.1| riboflavin biosynthesis protein RibD [Burkholderia pseudomallei
           1710a]
 gi|254298894|ref|ZP_04966344.1| riboflavin biosynthesis protein RibD [Burkholderia pseudomallei
           406e]
 gi|52210648|emb|CAH36632.1| multifunctional riboflavin biosynthetic protein [deaminase,
           reductase [Burkholderia pseudomallei K96243]
 gi|76579639|gb|ABA49114.1| riboflavin biosynthesis protein RibD [Burkholderia pseudomallei
           1710b]
 gi|126227354|gb|ABN90894.1| riboflavin biosynthesis protein RibD [Burkholderia pseudomallei
           1106a]
 gi|134248295|gb|EBA48378.1| riboflavin biosynthesis protein RibD [Burkholderia pseudomallei
           305]
 gi|157808908|gb|EDO86078.1| riboflavin biosynthesis protein RibD [Burkholderia pseudomallei
           406e]
 gi|169652874|gb|EDS85567.1| riboflavin biosynthesis protein RibD [Burkholderia pseudomallei
           S13]
 gi|225934059|gb|EEH30044.1| riboflavin biosynthesis protein RibD [Burkholderia pseudomallei
           Pakistan 9]
 gi|242138001|gb|EES24403.1| riboflavin biosynthesis protein RibD [Burkholderia pseudomallei
           1106b]
 gi|254218647|gb|EET08031.1| riboflavin biosynthesis protein RibD [Burkholderia pseudomallei
           1710a]
          Length = 378

 Score = 91.9 bits (228), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 32/151 (21%), Positives = 53/151 (35%), Gaps = 18/151 (11%)

Query: 2   KKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
           +     M  AL  A          P VG V V ++ +I     +         HAE+ A+
Sbjct: 4   ESDFTHMQRALALAARGMYTTTPNPRVGCVIVKDDVVIGEGFTQPAGQD----HAEVQAL 59

Query: 60  RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113
           +   R      L +  +YVTLEPC        CA  +  AR+ ++     +P       G
Sbjct: 60  KDA-RARGN-DLRDATVYVTLEPCSHFGRTPPCAHTLIDARVGKVVAAMEDPNPQVSGRG 117

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
                 A      ++  G+    + ++   F
Sbjct: 118 LAMLRDAG----IDVRCGLLAHEAHEMNIGF 144


>gi|85715452|ref|ZP_01046433.1| Riboflavin biosynthesis protein RibD [Nitrobacter sp. Nb-311A]
 gi|85697647|gb|EAQ35523.1| Riboflavin biosynthesis protein RibD [Nitrobacter sp. Nb-311A]
          Length = 383

 Score = 91.9 bits (228), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 36/143 (25%), Positives = 46/143 (32%), Gaps = 21/143 (14%)

Query: 4   GNVFMSCALEEAQN--AALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
              FM  AL   +    A      VGAV V N  I+ R   +         HAE  A+R 
Sbjct: 21  DLHFMQLALALGRRSLGASAPNPAVGAVIVKNGVIVGRGWTQPGGR----PHAEAEALRR 76

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
                         LYVTLEPC        CA A+  A I R+     +P       G  
Sbjct: 77  AGEAA-----RGATLYVTLEPCSHVGKTPPCADAVIAAGITRVVSAIEDPTPEVAGKGHA 131

Query: 116 FYTLATCHHSPEIYPGISEQRSR 138
               A       +  G+    + 
Sbjct: 132 RLRAAG----ISVEVGLCADEAA 150


>gi|53725938|ref|YP_103713.1| riboflavin biosynthesis protein RibD [Burkholderia mallei ATCC
           23344]
 gi|67643977|ref|ZP_00442720.1| riboflavin biosynthesis protein RibD [Burkholderia mallei GB8 horse
           4]
 gi|121598467|ref|YP_992112.1| riboflavin biosynthesis protein RibD [Burkholderia mallei SAVP1]
 gi|124385806|ref|YP_001028557.1| riboflavin biosynthesis protein RibD [Burkholderia mallei NCTC
           10229]
 gi|126449378|ref|YP_001081545.1| riboflavin biosynthesis protein RibD [Burkholderia mallei NCTC
           10247]
 gi|166998345|ref|ZP_02264205.1| riboflavin biosynthesis protein RibD [Burkholderia mallei PRL-20]
 gi|254175573|ref|ZP_04882233.1| riboflavin biosynthesis protein RibD [Burkholderia mallei ATCC
           10399]
 gi|254202412|ref|ZP_04908775.1| riboflavin biosynthesis protein RibD [Burkholderia mallei FMH]
 gi|254207743|ref|ZP_04914093.1| riboflavin biosynthesis protein RibD [Burkholderia mallei JHU]
 gi|254356356|ref|ZP_04972632.1| riboflavin biosynthesis protein RibD [Burkholderia mallei
           2002721280]
 gi|52429361|gb|AAU49954.1| riboflavin biosynthesis protein RibD [Burkholderia mallei ATCC
           23344]
 gi|121227277|gb|ABM49795.1| riboflavin biosynthesis protein RibD [Burkholderia mallei SAVP1]
 gi|124293826|gb|ABN03095.1| riboflavin biosynthesis protein RibD [Burkholderia mallei NCTC
           10229]
 gi|126242248|gb|ABO05341.1| riboflavin biosynthesis protein RibD [Burkholderia mallei NCTC
           10247]
 gi|147746659|gb|EDK53736.1| riboflavin biosynthesis protein RibD [Burkholderia mallei FMH]
 gi|147751637|gb|EDK58704.1| riboflavin biosynthesis protein RibD [Burkholderia mallei JHU]
 gi|148025353|gb|EDK83507.1| riboflavin biosynthesis protein RibD [Burkholderia mallei
           2002721280]
 gi|160696617|gb|EDP86587.1| riboflavin biosynthesis protein RibD [Burkholderia mallei ATCC
           10399]
 gi|238525453|gb|EEP88881.1| riboflavin biosynthesis protein RibD [Burkholderia mallei GB8 horse
           4]
 gi|243065414|gb|EES47600.1| riboflavin biosynthesis protein RibD [Burkholderia mallei PRL-20]
          Length = 380

 Score = 91.9 bits (228), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 32/151 (21%), Positives = 53/151 (35%), Gaps = 18/151 (11%)

Query: 2   KKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
           +     M  AL  A          P VG V V ++ +I     +         HAE+ A+
Sbjct: 4   ESDFTHMQRALALAARGMYTTAPNPRVGCVIVKDDVVIGEGFTQPAGQD----HAEVQAL 59

Query: 60  RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113
           +   R      L +  +YVTLEPC        CA  +  AR+ ++     +P       G
Sbjct: 60  KDA-RARGN-DLRDATVYVTLEPCSHFGRTPPCAHTLIDARVGKVVAAMEDPNPQVSGRG 117

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
                 A      ++  G+    + ++   F
Sbjct: 118 LAMLRDAG----IDVRCGLLAHEAHEMNIGF 144


>gi|300113775|ref|YP_003760350.1| CMP/dCMP deaminase zinc-binding protein [Nitrosococcus watsonii
           C-113]
 gi|299539712|gb|ADJ28029.1| CMP/dCMP deaminase zinc-binding protein [Nitrosococcus watsonii
           C-113]
          Length = 159

 Score = 91.5 bits (227), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 31/133 (23%), Positives = 49/133 (36%), Gaps = 3/133 (2%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIR 60
                ++   +E A  A    + P G+V V  + K++    NR     D T H E    R
Sbjct: 4   DSDMQYLRRCVELAAKALESGDEPFGSVLVAADGKVLFEDRNRV-ASGDRTRHPEFEIAR 62

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
                +S E      +Y + E C MCAAA     + R+ Y +S+ +              
Sbjct: 63  WAAANMSPEARVAATVYTSGEHCPMCAAAHGWVGLGRIVYVSSSEQLATWLTDLGVPAPP 122

Query: 121 -TCHHSPEIYPGI 132
                  E+ PG+
Sbjct: 123 VRTLPIREVVPGV 135


>gi|255002722|ref|ZP_05277686.1| riboflavin biosynthesis protein (ribD) [Anaplasma marginale str.
           Puerto Rico]
          Length = 364

 Score = 91.5 bits (227), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 38/155 (24%), Positives = 58/155 (37%), Gaps = 28/155 (18%)

Query: 8   MSCALEEAQNAALRNEI---P-VGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
           MS AL  A            P VG V       I+ R             HAE++A++  
Sbjct: 1   MSIALRLAHRGL--GNTYPNPTVGCVVTNSAGSIVGRGW--TAMGGRP--HAEVVALKQA 54

Query: 63  CRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQF 116
                        +YVTLEPC        C AA+  A +RR+   A +P       G + 
Sbjct: 55  GEAA-----AGSTVYVTLEPCCHHGQTGPCTAALISAGVRRVVIAALDPDKRVSGKGARS 109

Query: 117 YTLATCHHSPEIYPGISEQRSRQIIQDFF--KERR 149
              +      E+  G+ +Q++ ++   FF  K +R
Sbjct: 110 LADSG----VEVKLGVLQQQAEELNVGFFYSKTKR 140


>gi|315657966|ref|ZP_07910840.1| riboflavin biosynthesis protein RibD [Staphylococcus lugdunensis
           M23590]
 gi|315497002|gb|EFU85323.1| riboflavin biosynthesis protein RibD [Staphylococcus lugdunensis
           M23590]
          Length = 383

 Score = 91.5 bits (227), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 35/155 (22%), Positives = 63/155 (40%), Gaps = 24/155 (15%)

Query: 2   KKGNVFMSCALEEAQNAALRNEI--PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
            K ++++S A++ A+    +  +  PVGAV V N +II    +  +  K    HAE+ AI
Sbjct: 35  DKLDLYLSKAIQLAKMVKGQTGVNPPVGAVVVKNGRIIGLGAHLKQGEK----HAEVQAI 90

Query: 60  RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113
            M              +YV+L+PC        C   I    + ++ Y   +         
Sbjct: 91  DMAGDEAQ-----GATIYVSLQPCTHYGSTPPCVNKIIDHGLDKVVYAVKDTTL--PSKS 143

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKER 148
            +  T A      ++Y    +  +  + +DFFK +
Sbjct: 144 DEILTQAG----IQVYQQF-DHEAYCLYEDFFKAK 173


>gi|289550476|ref|YP_003471380.1| Diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Staphylococcus lugdunensis HKU09-01]
 gi|289180008|gb|ADC87253.1| Diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Staphylococcus lugdunensis HKU09-01]
          Length = 368

 Score = 91.5 bits (227), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 35/155 (22%), Positives = 63/155 (40%), Gaps = 24/155 (15%)

Query: 2   KKGNVFMSCALEEAQNAALRNEI--PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
            K ++++S A++ A+    +  +  PVGAV V N +II    +  +  K    HAE+ AI
Sbjct: 20  DKLDLYLSKAIQLAKMVKGQTGVNPPVGAVVVKNGRIIGLGAHLKQGEK----HAEVQAI 75

Query: 60  RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113
            M              +YV+L+PC        C   I    + ++ Y   +         
Sbjct: 76  DMAGDEAQ-----GATIYVSLQPCTHYGSTPPCVNKIIDHGLDKVVYAVKDTTL--PSKS 128

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKER 148
            +  T A      ++Y    +  +  + +DFFK +
Sbjct: 129 DEILTQAG----IQVYQQF-DHEAYCLYEDFFKAK 158


>gi|116251387|ref|YP_767225.1| riboflavin biosynthesis protein [Rhizobium leguminosarum bv. viciae
           3841]
 gi|115256035|emb|CAK07116.1| putative riboflavin biosynthesis protein [Rhizobium leguminosarum
           bv. viciae 3841]
          Length = 448

 Score = 91.5 bits (227), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 29/141 (20%), Positives = 46/141 (32%), Gaps = 21/141 (14%)

Query: 4   GNVFMSCALEEAQ--NAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
              FM+ A+  ++           VG + V +  I+ RA            HAE  A+  
Sbjct: 7   DERFMAAAIRLSRWHLGRTATNPSVGCLIVKDGVIVGRA----VTALSGRPHAETQALAE 62

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
              +           YVTLEPC        C+ A+    + R+    ++P       G  
Sbjct: 63  ASALA-----RGATAYVTLEPCSHHGKTPPCSEALIAYGVARVVISVTDPDPRVSGRGIA 117

Query: 116 FYTLATCHHSPEIYPGISEQR 136
               A      E+  G+ E  
Sbjct: 118 MLREAG----IEVDAGVLEAE 134


>gi|72162124|ref|YP_289781.1| hypothetical protein Tfu_1723 [Thermobifida fusca YX]
 gi|71915856|gb|AAZ55758.1| conserved hypothetical protein [Thermobifida fusca YX]
          Length = 163

 Score = 91.5 bits (227), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 33/153 (21%), Positives = 57/153 (37%), Gaps = 11/153 (7%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIR 60
           +     +   +E A  A    + P G+V V  +  +++   NR     D T H E    R
Sbjct: 4   ETDVRHLRRCVELAAQALEAGDEPFGSVLVAGDGTVLAEDHNRV-ASGDRTRHPEFALAR 62

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              R L+     E  +Y + E C MCAAA     + R+ Y +S+ +              
Sbjct: 63  WAVRNLTPNERAEATVYTSGEHCPMCAAAHGWVGLGRIVYASSSAQLMEWLAELGVPAPP 122

Query: 121 -TCHHSPEIYPGI--------SEQRSRQIIQDF 144
                  E+ PG+          ++ R++ + F
Sbjct: 123 VRALPIREVVPGVTVEGPVPELAEQVRELHRRF 155


>gi|238023203|ref|ZP_04603629.1| hypothetical protein GCWU000324_03130 [Kingella oralis ATCC 51147]
 gi|237865586|gb|EEP66726.1| hypothetical protein GCWU000324_03130 [Kingella oralis ATCC 51147]
          Length = 359

 Score = 91.5 bits (227), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 32/150 (21%), Positives = 52/150 (34%), Gaps = 21/150 (14%)

Query: 3   KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +    M  AL  A       +  P VG V    ++I+ +  +   +      HAE+ A+ 
Sbjct: 7   QDTQHMQLALALAWQGRFSTSPNPRVGCVIAHGSQIVGQGYH--VQAGAP--HAEVHALA 62

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
               +           YVTLEPC        CA A+  A + R+     +P       G 
Sbjct: 63  QAGALA-----RGATAYVTLEPCAHHGRTPPCAEALVRAGVSRVVAAMQDPNPLVAGKGL 117

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
                A      +   G+ E  +R + + F
Sbjct: 118 AILRQAG----TQTASGLCEAEARALNRGF 143


>gi|119486402|ref|ZP_01620460.1| riboflavin biosynthesis protein [Lyngbya sp. PCC 8106]
 gi|119456304|gb|EAW37435.1| riboflavin biosynthesis protein [Lyngbya sp. PCC 8106]
          Length = 368

 Score = 91.5 bits (227), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 36/150 (24%), Positives = 57/150 (38%), Gaps = 22/150 (14%)

Query: 4   GNVFMSCALEEAQNAA-LRNEIP-VGAVAVLNN-KIISRAGNRNRELKDVTAHAEILAIR 60
               M   LE A+ A       P VG+V V +N  II    +          HAE+ A+R
Sbjct: 14  DRQMMLRCLELARQALGKTAPNPLVGSVVVQDNYNIIGEGFH----PGAGQPHAEVFALR 69

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
                   E      +YV LEPC        C  A+  A++ ++  G  +P       G 
Sbjct: 70  DAG-----EQAKGATVYVNLEPCNHYGRTPPCTEALIKAKVAKVVVGMIDPNPLVAGQGV 124

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
           +    A      E+  G+ ++  +Q+ + F
Sbjct: 125 ERLKQAG----IEVIVGVEQEACQQLNEGF 150


>gi|254193400|ref|ZP_04899834.1| riboflavin biosynthesis protein RibD [Burkholderia pseudomallei
           S13]
 gi|169650153|gb|EDS82846.1| riboflavin biosynthesis protein RibD [Burkholderia pseudomallei
           S13]
          Length = 398

 Score = 91.5 bits (227), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 34/152 (22%), Positives = 51/152 (33%), Gaps = 21/152 (13%)

Query: 4   GNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
               M+ AL  A+           VG V     + +    +R         HAE+ A+R 
Sbjct: 8   DRTHMAHALRLAEQGLYTTHPNPRVGCVIARGARTLGAGWHRRAGE----PHAEVHALRE 63

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
                  E       YVTLEPC        CA A+  A + R+   A +P       G  
Sbjct: 64  AG-----ERARGATAYVTLEPCAHFGRTPPCANALVAAGVARVVIAARDPFEQVAGRGAA 118

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
               A       +  G+   ++R++   FF  
Sbjct: 119 RLADAG----IVVEQGLLAAQARELNIGFFSR 146


>gi|296314604|ref|ZP_06864545.1| riboflavin biosynthesis protein RibD [Neisseria polysaccharea ATCC
           43768]
 gi|296838643|gb|EFH22581.1| riboflavin biosynthesis protein RibD [Neisseria polysaccharea ATCC
           43768]
          Length = 369

 Score = 91.5 bits (227), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 33/159 (20%), Positives = 59/159 (37%), Gaps = 24/159 (15%)

Query: 2   KKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
           +     M  AL+ A       +  P VG V     +++ +  +   +  +   HAE+ A+
Sbjct: 4   ETDISMMQNALDLAALGRFSTSPNPRVGCVIAQGGQVVGQGFH--IKAGEP--HAEVHAL 59

Query: 60  RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113
           R   ++           +VTLEPC        CA A+  A + R+     +P       G
Sbjct: 60  RQAGKMA-----KGATAFVTLEPCSHYGRTPPCAEALVRAGVSRVVAAMRDPNPLVAGKG 114

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDF---FKERR 149
                 A      E   G+ E  ++++ + F    + RR
Sbjct: 115 LALLEAAGI--KMEC--GLLESEAKELNRGFLSRIERRR 149


>gi|298369934|ref|ZP_06981250.1| riboflavin biosynthesis protein RibD [Neisseria sp. oral taxon 014
           str. F0314]
 gi|298281394|gb|EFI22883.1| riboflavin biosynthesis protein RibD [Neisseria sp. oral taxon 014
           str. F0314]
          Length = 367

 Score = 91.5 bits (227), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 33/151 (21%), Positives = 54/151 (35%), Gaps = 21/151 (13%)

Query: 2   KKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
           +     M  AL  A+      +  P VG V     +I+ +  +          HAE+ A+
Sbjct: 4   ENDVRMMQNALALARLGRFSTSPNPRVGCVIAHGGQIVGQGFHVKAGE----PHAEVHAL 59

Query: 60  RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113
           R    +           YVTLEPC        CA A+  + + R+    ++P       G
Sbjct: 60  RQAGEMA-----RGATAYVTLEPCSHYGRTPPCAEALIRSGVARVVAAMTDPNPLVAGKG 114

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
                 A      E   G+ E  +R++ + F
Sbjct: 115 LAMLEAADI--RTE--SGLLETEARELNRGF 141


>gi|317508050|ref|ZP_07965736.1| cytidine and deoxycytidylate deaminase zinc-binding protein
           [Segniliparus rugosus ATCC BAA-974]
 gi|316253646|gb|EFV13030.1| cytidine and deoxycytidylate deaminase zinc-binding protein
           [Segniliparus rugosus ATCC BAA-974]
          Length = 196

 Score = 91.5 bits (227), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 30/103 (29%), Positives = 45/103 (43%), Gaps = 7/103 (6%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVL--NNKIISRAGNRNRELKDVTAHAEILAIR 60
                M  A+  A         P G+V V   +N ++++  N N E  +   H E++A+ 
Sbjct: 49  THEANMRKAMHAAAGNPRL---PFGSVIVRTSDNAMLAKGVNHNTE--NPMWHGEVVALN 103

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
                       +V LY T EPC MCA AI  A I R+ + +S
Sbjct: 104 DYTARHGNADWRDVTLYTTGEPCAMCAGAIIWAGIPRVVWASS 146


>gi|126457369|ref|YP_001075539.1| riboflavin biosynthesis protein RibD [Burkholderia pseudomallei
           1106a]
 gi|242313881|ref|ZP_04812898.1| riboflavin biosynthesis protein RibD [Burkholderia pseudomallei
           1106b]
 gi|126231137|gb|ABN94550.1| riboflavin biosynthesis protein RibD [Burkholderia pseudomallei
           1106a]
 gi|242137120|gb|EES23523.1| riboflavin biosynthesis protein RibD [Burkholderia pseudomallei
           1106b]
          Length = 395

 Score = 91.5 bits (227), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 34/152 (22%), Positives = 51/152 (33%), Gaps = 21/152 (13%)

Query: 4   GNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
               M+ AL  A+           VG V     + +    +R         HAE+ A+R 
Sbjct: 8   DRTHMAHALRLAEQGLYTTHPNPRVGCVIARGARTLGAGWHRRAGE----PHAEVHALRE 63

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
                  E       YVTLEPC        CA A+  A + R+   A +P       G  
Sbjct: 64  AG-----ERARGATAYVTLEPCAHFGRTPPCANALVAAGVARVVIAARDPFEQVAGRGAA 118

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
               A       +  G+   ++R++   FF  
Sbjct: 119 RLADAG----IVVEQGLLAAQARELNIGFFSR 146


>gi|126442868|ref|YP_001062584.1| riboflavin biosynthesis protein RibD [Burkholderia pseudomallei
           668]
 gi|126222359|gb|ABN85864.1| riboflavin biosynthesis protein RibD [Burkholderia pseudomallei
           668]
          Length = 401

 Score = 91.5 bits (227), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 34/152 (22%), Positives = 51/152 (33%), Gaps = 21/152 (13%)

Query: 4   GNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
               M+ AL  A+           VG V     + +    +R         HAE+ A+R 
Sbjct: 8   DRTHMAHALRLAEQGLYTTHPNPRVGCVIARGARTLGAGWHRRAGE----PHAEVHALRE 63

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
                  E       YVTLEPC        CA A+  A + R+   A +P       G  
Sbjct: 64  AG-----ERARGATAYVTLEPCAHFGRTPPCANALVAAGVARVVIAARDPFEQVAGRGAA 118

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
               A       +  G+   ++R++   FF  
Sbjct: 119 RLADAG----IVVEQGLLAAQARELNIGFFSR 146


>gi|53722153|ref|YP_111138.1| riboflavin biosynthesis protein [Burkholderia pseudomallei K96243]
 gi|134283488|ref|ZP_01770188.1| riboflavin biosynthesis protein RibD [Burkholderia pseudomallei
           305]
 gi|217418752|ref|ZP_03450259.1| riboflavin biosynthesis protein RibD [Burkholderia pseudomallei
           576]
 gi|237509799|ref|ZP_04522514.1| riboflavin biosynthesis protein RibD [Burkholderia pseudomallei
           MSHR346]
 gi|254190205|ref|ZP_04896714.1| riboflavin biosynthesis protein RibD [Burkholderia pseudomallei
           Pasteur 52237]
 gi|254263160|ref|ZP_04954025.1| riboflavin biosynthesis protein RibD [Burkholderia pseudomallei
           1710a]
 gi|52212567|emb|CAH38593.1| putative riboflavin biosynthesis protein [Burkholderia pseudomallei
           K96243]
 gi|134245237|gb|EBA45331.1| riboflavin biosynthesis protein RibD [Burkholderia pseudomallei
           305]
 gi|157937882|gb|EDO93552.1| riboflavin biosynthesis protein RibD [Burkholderia pseudomallei
           Pasteur 52237]
 gi|217398056|gb|EEC38071.1| riboflavin biosynthesis protein RibD [Burkholderia pseudomallei
           576]
 gi|235002004|gb|EEP51428.1| riboflavin biosynthesis protein RibD [Burkholderia pseudomallei
           MSHR346]
 gi|254214162|gb|EET03547.1| riboflavin biosynthesis protein RibD [Burkholderia pseudomallei
           1710a]
          Length = 395

 Score = 91.5 bits (227), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 34/152 (22%), Positives = 51/152 (33%), Gaps = 21/152 (13%)

Query: 4   GNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
               M+ AL  A+           VG V     + +    +R         HAE+ A+R 
Sbjct: 8   DRTHMAHALRLAEQGLYTTHPNPRVGCVIARGARTLGAGWHRRAGE----PHAEVHALRE 63

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
                  E       YVTLEPC        CA A+  A + R+   A +P       G  
Sbjct: 64  AG-----ERARGATAYVTLEPCAHFGRTPPCANALVAAGVARVVIAARDPFEQVAGRGAA 118

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
               A       +  G+   ++R++   FF  
Sbjct: 119 RLADAG----IVVEQGLLAAQARELNIGFFSR 146


>gi|302419813|ref|XP_003007737.1| conserved hypothetical protein [Verticillium albo-atrum VaMs.102]
 gi|261353388|gb|EEY15816.1| conserved hypothetical protein [Verticillium albo-atrum VaMs.102]
          Length = 405

 Score = 91.5 bits (227), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 23/56 (41%), Positives = 32/56 (57%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
             + FM  AL+ A+ A   NE PVG V V NNK+I++  N     ++ T HAE +A
Sbjct: 55  THHGFMDQALDMARLALRTNETPVGCVIVHNNKVIAKGMNATNVTRNGTRHAEFMA 110



 Score = 64.9 bits (158), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 21/51 (41%), Positives = 29/51 (56%)

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFY 117
            + I+ E  LYVT+EPC MCA  +    IR++Y+GA N K GG       +
Sbjct: 185 PRSIIRESVLYVTVEPCVMCAGLLRQLGIRKVYFGAVNDKFGGAGGVFSIH 235


>gi|319404317|emb|CBI77910.1| Riboflavin biosynthesis protein ribD [Bartonella rochalimae ATCC
           BAA-1498]
          Length = 374

 Score = 91.5 bits (227), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 35/155 (22%), Positives = 57/155 (36%), Gaps = 25/155 (16%)

Query: 2   KKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNK----IISRAGNRNRELKDVTAHAE 55
           ++   FM+ A+  A+    L  E P VGA+ V N      I+               HAE
Sbjct: 5   EQDKRFMAVAIRLAERHIGLTGENPSVGALIVQNKGAGASIVGYG----VTAIQGRPHAE 60

Query: 56  ILAIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGG 109
           + A+ M   +           YVTLEPC+       C  A+  + I R+    S+P    
Sbjct: 61  VQALLMAGPLAC-----GATAYVTLEPCSHYGETSPCVNALINSGITRVVIALSDPDQRV 115

Query: 110 IENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
              G      A      E+  G+  + + + +  +
Sbjct: 116 YGCGIALLRAAG----IEVVEGVLAEEAFETLSAY 146


>gi|254253006|ref|ZP_04946324.1| Pyrimidine reductase [Burkholderia dolosa AUO158]
 gi|124895615|gb|EAY69495.1| Pyrimidine reductase [Burkholderia dolosa AUO158]
          Length = 373

 Score = 91.5 bits (227), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 33/154 (21%), Positives = 52/154 (33%), Gaps = 20/154 (12%)

Query: 1   MKKGNVF--MSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56
           M     F  M  AL  A          P VG V V +  +I     +         HAE+
Sbjct: 1   MFSDIDFAHMQRALALAARGMYTTAPNPRVGCVIVKDGSVIGEGFTQPAGQD----HAEV 56

Query: 57  LAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGI 110
            A++          +    +YVTLEPC        CA A+  AR+ ++     +P     
Sbjct: 57  QALKDA--RARGHDVAGATVYVTLEPCSHFGRTPPCANALIDARVAKVVAAMEDPNPQVS 114

Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
             G      A      ++  G+    + ++   F
Sbjct: 115 GRGLTMLRDAG----IDVRCGLLAHEAGELNIGF 144


>gi|134294988|ref|YP_001118723.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase /
           diaminohydroxyphosphoribosylaminopyrimidine deaminase
           [Burkholderia vietnamiensis G4]
 gi|134138145|gb|ABO53888.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase /
           diaminohydroxyphosphoribosylaminopyrimidine deaminase
           [Burkholderia vietnamiensis G4]
          Length = 373

 Score = 91.5 bits (227), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 33/154 (21%), Positives = 52/154 (33%), Gaps = 20/154 (12%)

Query: 1   MKKGNVF--MSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56
           M     F  M  AL  A          P VG V V +  +I     +         HAE+
Sbjct: 1   MFSDTDFAHMQRALALAARGMYTTAPNPRVGCVIVKDGDVIGEGFTQPAGQD----HAEV 56

Query: 57  LAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGI 110
            A++          +    +YVTLEPC        CA A+  AR+ ++     +P     
Sbjct: 57  QALKDARARGC--DVAGATVYVTLEPCSHFGRTPPCANALIDARVAKVVAAMEDPNPQVS 114

Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
             G      A      ++  G+    + ++   F
Sbjct: 115 GRGLGMLRDAG----IDVRCGLLAYEAGELNIGF 144


>gi|167906520|ref|ZP_02493725.1| riboflavin biosynthesis protein [Burkholderia pseudomallei NCTC
           13177]
          Length = 397

 Score = 91.5 bits (227), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 34/152 (22%), Positives = 51/152 (33%), Gaps = 21/152 (13%)

Query: 4   GNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
               M+ AL  A+           VG V     + +    +R         HAE+ A+R 
Sbjct: 8   DRTHMAHALRLAEQGLYTTHPNPRVGCVIARGARTLGAGWHRRAGE----PHAEVHALRE 63

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
                  E       YVTLEPC        CA A+  A + R+   A +P       G  
Sbjct: 64  AG-----ERARGATAYVTLEPCAHFGRTPPCANALVAAGVARVVIAARDPFEQVAGRGAA 118

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
               A       +  G+   ++R++   FF  
Sbjct: 119 RLADAG----IVVEQGLLAAQARELNIGFFSR 146


>gi|74318186|ref|YP_315926.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase /
           diaminohydroxyphosphoribosylaminopyrimidine deaminase
           [Thiobacillus denitrificans ATCC 25259]
 gi|74057681|gb|AAZ98121.1| Riboflavin biosynthesis protein RibD
           diaminohydroxyphosphoribosylaminopyrimid ine deaminase +
           5-amino-6-(5- phosphoribosylamino)uracil reductase
           oxidoreductase protein [Thiobacillus denitrificans ATCC
           25259]
          Length = 359

 Score = 91.5 bits (227), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 40/149 (26%), Positives = 59/149 (39%), Gaps = 21/149 (14%)

Query: 4   GNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
            + FMS AL+ A            VG V V +++I+    +        T HAEI A+  
Sbjct: 7   DSRFMSRALQLAARGLFTTSPNPRVGCVLVKDDRIVGEGWHERA----GTPHAEIHAL-- 60

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
                + E       YVTLEPC        CA A+  A + R+    ++P       G  
Sbjct: 61  ---RAAGEAARGATAYVTLEPCSHHGRTPPCAEALIDAGVSRVVAAMTDPNPLVAGGGIS 117

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDF 144
             TLA    + E+  G+ E  +R +   F
Sbjct: 118 MLTLAGI--AAEV--GLMEAEARALNPGF 142


>gi|302761778|ref|XP_002964311.1| hypothetical protein SELMODRAFT_438667 [Selaginella moellendorffii]
 gi|300168040|gb|EFJ34644.1| hypothetical protein SELMODRAFT_438667 [Selaginella moellendorffii]
          Length = 336

 Score = 91.5 bits (227), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 32/187 (17%), Positives = 55/187 (29%), Gaps = 57/187 (30%)

Query: 6   VFMSCALEEAQNAALRNEIPVGAVAVLN--NKIISRAGNRNRELK-----------DVTA 52
            FM  A+ +A  A     +  GAV V     ++I+   + +                   
Sbjct: 145 AFMVRAMHQASLAIDHGRLSNGAVIVDPSIGQVIASGYDESTPPSCTDCSSCSGGWHPLR 204

Query: 53  HAEILAIRMGCRILSQ-------------------------------------------- 68
           HA ++AI        +                                            
Sbjct: 205 HAAMVAIEQASERDRRLFPDDKECDEATLSVKRQRCEASAAESIHIESRSSSITVEASRP 264

Query: 69  EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEI 128
            +    D+Y+T EPC MCA A+   R RR+ +  SNP  G +      +   + +H   +
Sbjct: 265 YLCTGFDIYLTREPCAMCAMAMVHQRFRRVIFRTSNPDNGALGGKFFLHRQPSLNHHYTV 324

Query: 129 YPGISEQ 135
                 +
Sbjct: 325 IQATLAE 331


>gi|319405760|emb|CBI79383.1| Riboflavin biosynthesis protein ribD [Bartonella sp. AR 15-3]
          Length = 374

 Score = 91.1 bits (226), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 36/154 (23%), Positives = 57/154 (37%), Gaps = 25/154 (16%)

Query: 3   KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNK----IISRAGNRNRELKDVTAHAEI 56
           +   FM+ A+  A+    L  E P VGA+ V N +    I+               HAE+
Sbjct: 6   QDKRFMAAAIRLAERHIGLTGENPSVGALIVQNKETGSSIVGYG----VTALRGRPHAEV 61

Query: 57  LAIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGI 110
            A+ M   +           YVTLEPC+       C  A+  A I R+    S+P     
Sbjct: 62  KALLMAGPLAY-----GATAYVTLEPCSHYGKTSPCVNALINAGITRVVIALSDPDQRVY 116

Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
             G      A      E+  G+  + + + +  +
Sbjct: 117 GCGITLLRAAG----IEVTEGVLAEEAFETLSAY 146


>gi|126666704|ref|ZP_01737681.1| Riboflavin biosynthesis protein RibD:Riboflavin-specific deaminase,
           C-terminal [Marinobacter sp. ELB17]
 gi|126628749|gb|EAZ99369.1| Riboflavin biosynthesis protein RibD:Riboflavin-specific deaminase,
           C-terminal [Marinobacter sp. ELB17]
          Length = 371

 Score = 91.1 bits (226), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 32/154 (20%), Positives = 56/154 (36%), Gaps = 21/154 (13%)

Query: 2   KKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
            +   FM+ A++ A       +  P VG V    ++I+  + +         AHAE+ A+
Sbjct: 4   TRDRAFMARAVQLAWRGRYSTHPNPRVGCVIARGDRILGESWHERAGE----AHAEVRAL 59

Query: 60  RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113
                            YVTLEPC        CA A+  A + R++    +P       G
Sbjct: 60  SQAG-----TSARGSTAYVTLEPCSHFGRTPPCAKALIEAGVARVFAATLDPNPNVSGRG 114

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
            +    A       ++ G+    + ++   F K 
Sbjct: 115 LEMLRAAG----IRVHVGLLAGEAAKLNPGFMKR 144


>gi|307628117|gb|ADN72421.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Escherichia coli UM146]
          Length = 361

 Score = 91.1 bits (226), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 36/150 (24%), Positives = 56/150 (37%), Gaps = 21/150 (14%)

Query: 8   MSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M+ AL+ AQ      +  P VG V V + +I+    ++         HAE+ A+RM    
Sbjct: 1   MARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGE----PHAEVQALRMAGEK 56

Query: 66  LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
                      YVTLEPC        C  A+  A + R+     +P       G      
Sbjct: 57  A-----KGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVAAMQDPNPQVAGRGLYRLQQ 111

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
           A      ++  G+    + Q+ + F K  R
Sbjct: 112 AG----IDVSHGLMMSEAEQLNKGFLKRMR 137


>gi|221068623|ref|ZP_03544728.1| riboflavin biosynthesis protein RibD [Comamonas testosteroni KF-1]
 gi|220713646|gb|EED69014.1| riboflavin biosynthesis protein RibD [Comamonas testosteroni KF-1]
          Length = 367

 Score = 91.1 bits (226), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 37/153 (24%), Positives = 61/153 (39%), Gaps = 19/153 (12%)

Query: 4   GNVFMSCALEEAQNAA--LRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIR 60
            N +M+ ALE+A  A         VG V V  +++II +     ++      HAE++A+R
Sbjct: 2   NNFYMNKALEQAAQALFLSSPNPRVGCVIVDASDRIIGQGF--TQQAGGP--HAEVMALR 57

Query: 61  MGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGT 114
                 +         YVTLEPC+       C  A+  A I ++    ++P       G 
Sbjct: 58  DAAAKGNDVR--GATAYVTLEPCSHHGRTGPCCDALIAAGIAKVVGALTDPNPQVAGQGF 115

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
           +    A      ++  G     SR++   FF  
Sbjct: 116 ERLRAAG----VDVEIGPGAAESRELNIGFFSR 144


>gi|319407322|emb|CBI80963.1| Riboflavin biosynthesis protein ribD [Bartonella sp. 1-1C]
          Length = 374

 Score = 91.1 bits (226), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 35/155 (22%), Positives = 56/155 (36%), Gaps = 25/155 (16%)

Query: 2   KKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNK----IISRAGNRNRELKDVTAHAE 55
           ++   FM+ A+  A+    L  E P VGA+ V N      I+               HAE
Sbjct: 5   EQDKRFMAAAIRLAERHIGLTGENPSVGALIVQNKGAGASIVGYG----VTALQGRPHAE 60

Query: 56  ILAIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGG 109
           + A+ M   +           YVTLEPC+       C  A+  + I R+    S+P    
Sbjct: 61  VQALLMAGPLAY-----GATAYVTLEPCSHYGETSPCVNALINSGITRVVIALSDPDQRV 115

Query: 110 IENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
              G      A      E+  G+    + + +  +
Sbjct: 116 YGCGIALLRAAG----IEVVEGVLADEAFETLSAY 146


>gi|254431289|ref|ZP_05044992.1| riboflavin biosynthesis protein RibD [Cyanobium sp. PCC 7001]
 gi|197625742|gb|EDY38301.1| riboflavin biosynthesis protein RibD [Cyanobium sp. PCC 7001]
          Length = 371

 Score = 91.1 bits (226), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 34/146 (23%), Positives = 54/146 (36%), Gaps = 22/146 (15%)

Query: 8   MSCALEEAQNAALRN--EIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           M  AL+ A     R      VG V +    +++    +         AHAE+ A+R    
Sbjct: 1   MQRALQLANLGCGRTSPNPMVGCVVLDAEGRLVGEGYHSQAGE----AHAEVGALRQAG- 55

Query: 65  ILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
               E        VTLEPC        C+ A+  A IRR+    ++P       G     
Sbjct: 56  ----ERARGGTAVVTLEPCCHHGRTPPCSDALLAAGIRRVVVAMADPDPQVAGGGIAQLR 111

Query: 119 LATCHHSPEIYPGISEQRSRQIIQDF 144
            A      E+  G++ + +R + + F
Sbjct: 112 SAG----VEVIEGVAAEEARALNRAF 133


>gi|308803240|ref|XP_003078933.1| COG1985: Pyrimidine reductase, riboflavin biosynthesis (ISS)
           [Ostreococcus tauri]
 gi|116057386|emb|CAL51813.1| COG1985: Pyrimidine reductase, riboflavin biosynthesis (ISS)
           [Ostreococcus tauri]
          Length = 207

 Score = 91.1 bits (226), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 41/156 (26%), Positives = 60/156 (38%), Gaps = 24/156 (15%)

Query: 3   KGNVFMSCALEEA--QNAALRNEIP-VGAVAVLN--NKIISRAGNRNRELKDVTAHAEIL 57
           +   +M  ALE A  + A   +  P VG V V    + ++ R  +          HAE+ 
Sbjct: 57  RDEEYMRQALEAAASRTAEEVHPNPLVGCVVVDPRADVVVGRGFHPRAGE----PHAEVF 112

Query: 58  AIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIE 111
           A+R    +           YVTLEPC        CA A+  A ++R+  G  +P      
Sbjct: 113 ALRAAGELA-----RGATAYVTLEPCNHFGRTPPCARALVDAGVKRVVVGFVDPDPRVSG 167

Query: 112 NGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
            G Q    A      ++  G  E R R+I  DF   
Sbjct: 168 GGIQTLLDAG----IDVAVGCEEARCREINADFIAR 199


>gi|73662304|ref|YP_301085.1| riboflavin specific deaminase [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
 gi|72494819|dbj|BAE18140.1| riboflavin specific deaminase [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
          Length = 347

 Score = 91.1 bits (226), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 36/157 (22%), Positives = 61/157 (38%), Gaps = 32/157 (20%)

Query: 5   NVFMSCALEEAQNAALRNE--IPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
           + +++ A++ AQ    +     PVGAV V   +I+    +  +  K    HAE+ A+ M 
Sbjct: 2   SQYLNYAIQLAQMVEGQTGLNPPVGAVVVNRGRIVGIGAHLKKGDK----HAEVQALDMA 57

Query: 63  CRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116
                ++      +Y++LEPC        C   I  A I R+ Y   +       NG   
Sbjct: 58  -----KDNAKGGTIYISLEPCTHFGSTPPCVNKIIEAGINRVVYAVKDTTL--PSNGDSI 110

Query: 117 YTLAT----CHHSPEIYPGISEQRSRQIIQDFFKERR 149
              A       H P+         +  + +DFF  +R
Sbjct: 111 LQEAGIDVEFRHQPD---------AENLYKDFFITKR 138


>gi|319783713|ref|YP_004143189.1| CMP/dCMP deaminase zinc-binding protein [Mesorhizobium ciceri
           biovar biserrulae WSM1271]
 gi|317169601|gb|ADV13139.1| CMP/dCMP deaminase zinc-binding protein [Mesorhizobium ciceri
           biovar biserrulae WSM1271]
          Length = 164

 Score = 91.1 bits (226), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 33/139 (23%), Positives = 49/139 (35%), Gaps = 17/139 (12%)

Query: 21  RNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVT 79
               P G V V  +++++ R GN      D   HAE    R        E L +  L  T
Sbjct: 31  HGHHPFGCVLVGPDDRVLMRQGNL-----DTVRHAETELARRAAAAYEPEFLWQCTLVST 85

Query: 80  LEPCTMCAAAISLARIRRLYYGASNPKGGGI---------ENGTQFYTLATCHHSPEIYP 130
            EPC MCA  +  A I RL YG    +   +          + +    L +     E++ 
Sbjct: 86  FEPCAMCAGTMYWANIGRLVYGVEETELLALTGDHAENPTMSLSSRTVLGSGQKKIEVFG 145

Query: 131 GIS--EQRSRQIIQDFFKE 147
                        +DF+K 
Sbjct: 146 PFPDIADEMLAPHRDFWKR 164


>gi|260425443|ref|ZP_05779423.1| riboflavin biosynthesis protein RibD [Citreicella sp. SE45]
 gi|260423383|gb|EEX16633.1| riboflavin biosynthesis protein RibD [Citreicella sp. SE45]
          Length = 363

 Score = 91.1 bits (226), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 34/158 (21%), Positives = 53/158 (33%), Gaps = 31/158 (19%)

Query: 1   MKKGNVFMSCALEEAQN--AALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTA-----H 53
           M +    M+ AL   +           VG V V + ++I R           TA     H
Sbjct: 1   MTQDIRHMAHALRLGRRRMGQCWPNPAVGCVIVKDGRVIGRG---------ATAPGGRPH 51

Query: 54  AEILAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKG 107
           AE  A+                +YVTLEPC        CA A+  A + R+    ++   
Sbjct: 52  AEPQALAQAGVAA-----RGATVYVTLEPCAHHGKTPPCAEALVKAGVARVVAPLADSDP 106

Query: 108 GGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
                G +        H  E+  G+  + + +    FF
Sbjct: 107 RVSGKGFEHLR----RHGIEVTTGVLAEEAARDHAGFF 140


>gi|302768607|ref|XP_002967723.1| hypothetical protein SELMODRAFT_440166 [Selaginella moellendorffii]
 gi|300164461|gb|EFJ31070.1| hypothetical protein SELMODRAFT_440166 [Selaginella moellendorffii]
          Length = 336

 Score = 91.1 bits (226), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 32/187 (17%), Positives = 55/187 (29%), Gaps = 57/187 (30%)

Query: 6   VFMSCALEEAQNAALRNEIPVGAVAVLN--NKIISRAGNRNRELK-----------DVTA 52
            FM  A+ +A  A     +  GAV V     ++I+   + +                   
Sbjct: 145 AFMVRAMHQASLAIDHGRLSNGAVIVDPSIGQVIASGYDESTPPSCTDCSSCSGGWHPLR 204

Query: 53  HAEILAIRMGCRILSQ-------------------------------------------- 68
           HA ++AI        +                                            
Sbjct: 205 HAAMVAIEQASERDRRLFPDDKECDEATLSVKRQRCEASAAESIHIESRSSSITVEASRP 264

Query: 69  EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEI 128
            +    D+Y+T EPC MCA A+   R RR+ +  SNP  G +      +   + +H   +
Sbjct: 265 YLCTGFDIYLTREPCAMCAMAMVHQRFRRVIFRTSNPDNGALGGKFFLHRQPSLNHHYTV 324

Query: 129 YPGISEQ 135
                 +
Sbjct: 325 IQATLAE 331


>gi|261401666|ref|ZP_05987791.1| riboflavin biosynthesis protein RibD [Neisseria lactamica ATCC
           23970]
 gi|269208249|gb|EEZ74704.1| riboflavin biosynthesis protein RibD [Neisseria lactamica ATCC
           23970]
          Length = 369

 Score = 91.1 bits (226), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 34/159 (21%), Positives = 56/159 (35%), Gaps = 24/159 (15%)

Query: 2   KKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
           +     M  AL+ A       +  P VG V     +++ +  +          HAE+ A+
Sbjct: 4   ETDISMMQNALKLAALGRFSTSPNPRVGCVIAQGGQVVGQGFHVKAGE----PHAEVHAL 59

Query: 60  RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113
           R    +           +VTLEPC        CA A+  A + R+     +P       G
Sbjct: 60  RQAGEMA-----KGATAFVTLEPCSHYGRTPPCAEALVRAGVSRVVAAMRDPNPLVAGKG 114

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDF---FKERR 149
                 A      E   G+ E  +R++ + F    + RR
Sbjct: 115 LALLEAAGI--KTEC--GLLESEARELNRGFLSRIERRR 149


>gi|224476858|ref|YP_002634464.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Staphylococcus carnosus subsp. carnosus TM300]
 gi|222421465|emb|CAL28279.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Staphylococcus carnosus subsp. carnosus TM300]
          Length = 349

 Score = 91.1 bits (226), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 38/162 (23%), Positives = 62/162 (38%), Gaps = 44/162 (27%)

Query: 5   NVFMSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
           N F+  A++ A+ A  +  + P VG+V V + +I+    +    LK    HAE+ A+ M 
Sbjct: 2   NRFLENAIQLAKMAEGQTGVNPAVGSVVVNHGRIVGLGAH----LKQGERHAEVQALDMA 57

Query: 63  CRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASN----------PK 106
                 +      +YV+LEPC        C   I  A I ++ Y   +           K
Sbjct: 58  G-----DQARGGTIYVSLEPCTHYGSTPPCVNKIIEAGISKVVYAMKDITLDSPGDEILK 112

Query: 107 GGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKER 148
             GIE   Q        H            + ++ +DFF  +
Sbjct: 113 SAGIEVVYQ--------HEV---------EAEKMYKDFFAAK 137


>gi|167570902|ref|ZP_02363776.1| riboflavin biosynthesis protein RibD [Burkholderia oklahomensis
           C6786]
          Length = 246

 Score = 91.1 bits (226), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 33/151 (21%), Positives = 53/151 (35%), Gaps = 18/151 (11%)

Query: 2   KKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
           +     M  AL  A          P VG V V N+ +I     +         HAE+ A+
Sbjct: 4   ESDFTHMQRALALAARGMYTTTPNPRVGCVIVQNDVVIGEGFTQPAGQD----HAEVQAL 59

Query: 60  RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113
           +          L +  +YVTLEPC        CA A+  AR+ ++     +P       G
Sbjct: 60  KDARARGG--DLRDATVYVTLEPCSHFGRTPPCAHALIDARVGKVVAAMEDPNPQVSGRG 117

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
                 A      ++  G+    + ++   F
Sbjct: 118 LAMLRDAG----IDVRCGLLTHEAHEMNIGF 144


>gi|66806435|ref|XP_636940.1| CMP/dCMP deaminase, zinc-binding domain-containing protein
           [Dictyostelium discoideum AX4]
 gi|60465344|gb|EAL63435.1| CMP/dCMP deaminase, zinc-binding domain-containing protein
           [Dictyostelium discoideum AX4]
          Length = 239

 Score = 91.1 bits (226), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 32/141 (22%), Positives = 55/141 (39%), Gaps = 14/141 (9%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
              +M   ++ A+    +  + V ++   N   I    N  R++KD+T HAEI+ I+   
Sbjct: 50  HQGYMQQVIDFAK---EKGALFVASIVHKNGTQIVIDMNLGRQMKDLTQHAEIVVIQKAN 106

Query: 64  RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC- 122
            +       +  LY T E C MC  AI  +   ++ YG S       +  +Q    +T  
Sbjct: 107 ALYGISNFSDYTLYTTGESCLMCQGAILYSGFSKVVYGTSIKTLYCDKCMSQVPIDSTFL 166

Query: 123 ----------HHSPEIYPGIS 133
                      + P I  G+ 
Sbjct: 167 TAYGYGLGDGWNRPTIIGGVL 187


>gi|254447932|ref|ZP_05061396.1| riboflavin biosynthesis protein RibD [gamma proteobacterium
           HTCC5015]
 gi|198262358|gb|EDY86639.1| riboflavin biosynthesis protein RibD [gamma proteobacterium
           HTCC5015]
          Length = 363

 Score = 91.1 bits (226), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 34/148 (22%), Positives = 58/148 (39%), Gaps = 18/148 (12%)

Query: 8   MSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M+ AL+ A       R+   VG V     ++++   ++         HAE+ A++     
Sbjct: 1   MARALQLAAKGLYSTRSNPRVGCVIARGERVLAEGYHQRPGEG----HAEVRALQALPE- 55

Query: 66  LSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
            S+  L     YVTLEPC+       C+ A+  A I R+     +P      +G      
Sbjct: 56  -SESDLSTATAYVTLEPCSHYGKTGPCSEALIKAGIGRVVAAMVDPNPDVAGSGLARLQQ 114

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKE 147
           A      E+  G+ E  +R +   F + 
Sbjct: 115 AG----VEVGSGLLESEARSLNPGFIQR 138


>gi|302919326|ref|XP_003052839.1| hypothetical protein NECHADRAFT_67750 [Nectria haematococca mpVI
           77-13-4]
 gi|256733779|gb|EEU47126.1| hypothetical protein NECHADRAFT_67750 [Nectria haematococca mpVI
           77-13-4]
          Length = 482

 Score = 91.1 bits (226), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 22/56 (39%), Positives = 32/56 (57%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
              F+  AL+ A+ A   NE PVG V V + K+I+R  N     ++ T HAEI+A+
Sbjct: 175 HMKFIEEALDMARLALRTNETPVGCVLVHDGKVIARGMNATNVTRNGTRHAEIMAL 230



 Score = 65.7 bits (160), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 26/114 (22%), Positives = 41/114 (35%), Gaps = 40/114 (35%)

Query: 72  PEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL----------AT 121
            E  LYVT+EPC MCA+ +    I+++Y+GA N K GG       +            A+
Sbjct: 302 RECILYVTVEPCVMCASLLRQLGIKKVYFGAVNDKFGGTGGVFSIHANSLPISADGQTAS 361

Query: 122 CHHSP------------------------------EIYPGISEQRSRQIIQDFF 145
            H +P                              EI  G     +  +++ F+
Sbjct: 362 AHPTPKPAQLPDGSGTLGVSYPPGGGDGGNIESGYEIEGGWGRDDAVGLLRRFY 415


>gi|29840652|ref|NP_829758.1| riboflavin biosynthesis protein RibD [Chlamydophila caviae GPIC]
 gi|29835002|gb|AAP05636.1| riboflavin biosynthesis protein RibD [Chlamydophila caviae GPIC]
          Length = 368

 Score = 90.7 bits (225), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 32/155 (20%), Positives = 58/155 (37%), Gaps = 21/155 (13%)

Query: 2   KKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
           ++   FM  A+E  +         P VG V V N +II    +  R       HAE  AI
Sbjct: 6   EQQLFFMRRAIELGEKGRFSAPPNPWVGCVIVKNGQIIGEGYHEKRGQL----HAEENAI 61

Query: 60  RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113
                  +   +   ++YVTLEPC        C   +   ++  +Y    +P       G
Sbjct: 62  NS-----TSVSVEGSEVYVTLEPCCHYGNTPPCVNLLIKHKVSTVYVALLDPDSRVAGKG 116

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKER 148
                 A       ++ G+ ++ + + ++ +  +R
Sbjct: 117 VASLKEAG----IRVFEGLGKKEAEESLKSYIHQR 147


>gi|330752436|emb|CBL87386.1| riboflavin biosynthesis protein [uncultured Flavobacteria
           bacterium]
          Length = 310

 Score = 90.7 bits (225), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 32/125 (25%), Positives = 51/125 (40%), Gaps = 17/125 (13%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC-- 83
           VG + V +++II              +HAE+ AI+    + +QE+L    LYVTLEPC  
Sbjct: 2   VGCLIVKDDEIIGEGYTDPYGG----SHAEVNAIKS---VKNQELLKSATLYVTLEPCSH 54

Query: 84  ----TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139
                 C   I   +I R+  G  +P       G      + C    ++  G+ E   + 
Sbjct: 55  HGKTPPCCDLILSRQIPRVVIGCIDPHEKVCGQGIARLKASGC----QVIVGVEEALCKL 110

Query: 140 IIQDF 144
             + F
Sbjct: 111 HHKRF 115


>gi|111022118|ref|YP_705090.1| cytosine deaminase [Rhodococcus jostii RHA1]
 gi|110821648|gb|ABG96932.1| cytosine deaminase [Rhodococcus jostii RHA1]
          Length = 159

 Score = 90.7 bits (225), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 28/145 (19%), Positives = 52/145 (35%), Gaps = 15/145 (10%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
              ++ A+ EA+       IP+GA     +  ++    NR  +  D + H E  A R   
Sbjct: 15  EELLTVAIAEAELGKREGGIPIGAALFAGDGSLLGSGRNRRVQHADPSVHGETDAFRAAG 74

Query: 64  RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123
           R   Q       +  TL PC  C+  +    I  +  G S    GG E   +        
Sbjct: 75  R---QRDYRSTIMVTTLSPCWYCSGLVRQFNIGAIVVGESVTFTGGHEWLRE-------- 123

Query: 124 HSPEIYPGISEQR-SRQIIQDFFKE 147
           +  ++   +   +    ++ +F + 
Sbjct: 124 NGVDVT--VLRDQHCIDLMTEFIEN 146


>gi|150396042|ref|YP_001326509.1| riboflavin biosynthesis protein RibD [Sinorhizobium medicae WSM419]
 gi|150027557|gb|ABR59674.1| riboflavin biosynthesis protein RibD [Sinorhizobium medicae WSM419]
          Length = 398

 Score = 90.7 bits (225), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 32/150 (21%), Positives = 49/150 (32%), Gaps = 21/150 (14%)

Query: 3   KGNVFMSCALEEAQNAALR-NEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +   FM+ AL  ++    R    P VG V V    I+ RA            HAE  A+ 
Sbjct: 7   EDERFMAAALRLSRRNLGRTGTNPSVGCVIVNEGMIVGRA----VTASGGRPHAETQALA 62

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
                           YVTLEPC        C  A+  + + R+     +P       G 
Sbjct: 63  EAGEKA-----RGATAYVTLEPCSHHGKTPPCTDALIASGVARVVVAILDPDERVAGRGI 117

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
                A       +  G+  +   + +Q +
Sbjct: 118 VLLREAG----IAVDIGVLREEGERALQAY 143


>gi|146341344|ref|YP_001206392.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino) uracil
           reductase [Bradyrhizobium sp. ORS278]
 gi|146194150|emb|CAL78171.1| bifunctional: diaminohydroxyphosphoribosylaminopyrimidine deaminase
           (N-terminal); 5-amino-6-(5-phosphoribosylamino) uracil
           reductase [Bradyrhizobium sp. ORS278]
          Length = 383

 Score = 90.7 bits (225), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 37/154 (24%), Positives = 52/154 (33%), Gaps = 21/154 (13%)

Query: 4   GNVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
              FM  AL   +    R      VGAV V +  I+ R   +         HAE  A+R 
Sbjct: 21  DRRFMQLALTLGRRGQGRTWPNPAVGAVVVKDGVIVGRGWTQPGGR----PHAEPEALRR 76

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
                         LYVTLEPC        CA A+  A I R+     +P       G  
Sbjct: 77  AGEAA-----KGATLYVTLEPCSHFGKSPPCADAVIAAGISRVVSAVEDPNPEVAAQGHA 131

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
               A      ++  G+    +++     F+  R
Sbjct: 132 KLRAAG----IQVEVGLCSADAKRDHAGHFRRIR 161


>gi|260753016|ref|YP_003225909.1| riboflavin biosynthesis protein RibD [Zymomonas mobilis subsp.
           mobilis NCIMB 11163]
 gi|258552379|gb|ACV75325.1| riboflavin biosynthesis protein RibD [Zymomonas mobilis subsp.
           mobilis NCIMB 11163]
          Length = 323

 Score = 90.7 bits (225), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 32/157 (20%), Positives = 59/157 (37%), Gaps = 24/157 (15%)

Query: 1   MKKGNVFMSCALEEAQ--NAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEIL 57
           ++    +M  A+   +           VG + V  +N+II R   ++        HAE +
Sbjct: 4   LENDIRWMQAAIALGERSKGLTAPSPSVGCIIVNKDNQIIGRGWTQSGGR----PHAEAM 59

Query: 58  AIRMGCRILSQEILPEVDLYVTLEPC-------TMCAAAISLARIRRLYYGASNPKGGGI 110
           A+         + L    +YVTLEPC         C+ ++  A+  R+     +P     
Sbjct: 60  ALSQ------CQSLKGATVYVTLEPCAHKSNRGPTCSDSLVAAQPERVVIACRDPDHRTN 113

Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
             G      A      ++  G+ E+++ Q +  FF  
Sbjct: 114 GQGISKMVAAG----IKVECGLLEKQAAQSMSGFFSR 146


>gi|162447960|ref|YP_001621092.1| riboflavin biosynthesis protein [Acholeplasma laidlawii PG-8A]
 gi|161986067|gb|ABX81716.1| riboflavin biosynthesis protein [Acholeplasma laidlawii PG-8A]
          Length = 357

 Score = 90.7 bits (225), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 34/148 (22%), Positives = 57/148 (38%), Gaps = 21/148 (14%)

Query: 6   VFMSCALEEAQNAAL-RNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
            +M  A   A       N  P VGAV + + K+I +  ++         HAE+ AI    
Sbjct: 8   KYMKQAFNLAIKGEGFVNPNPLVGAVIIKDGKVIGKGYHKAFGQ----VHAEVDAINHA- 62

Query: 64  RILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFY 117
                E +    ++VTLEPC        CA  +    I+ +Y    +P     + G +  
Sbjct: 63  ----TEDVAGATMFVTLEPCSHHGKQPPCAFKLIEKGIKEVYIANLDPNPLVYKQGVKVL 118

Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDFF 145
             A      +++ GI +    ++   FF
Sbjct: 119 EDAG----IKVHYGILDDLGLKVNDIFF 142


>gi|170581814|ref|XP_001895850.1| Cytidine and deoxycytidylate deaminase zinc-binding region family
           protein [Brugia malayi]
 gi|158597081|gb|EDP35311.1| Cytidine and deoxycytidylate deaminase zinc-binding region family
           protein [Brugia malayi]
          Length = 292

 Score = 90.7 bits (225), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 32/111 (28%), Positives = 53/111 (47%), Gaps = 12/111 (10%)

Query: 27  GAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGC---RILSQEIL----PEVDLYV 78
           G V V    ++++++GNRN        HA + A+   C   R    +IL       D+Y+
Sbjct: 180 GCVIVDLKGEVVAKSGNRNI----PLGHAVMAAVSDLCERHRTKQSDILQYLGTGFDVYL 235

Query: 79  TLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIY 129
           T EPC MCA A+   R+ R++YG   P  G  E+  +     + +H   ++
Sbjct: 236 TDEPCAMCAMALVHFRVGRVFYGKRAPLDGVYESCWRIQEEKSLNHHYTVF 286


>gi|307153764|ref|YP_003889148.1| riboflavin biosynthesis protein RibD [Cyanothece sp. PCC 7822]
 gi|306983992|gb|ADN15873.1| riboflavin biosynthesis protein RibD [Cyanothece sp. PCC 7822]
          Length = 369

 Score = 90.7 bits (225), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 34/149 (22%), Positives = 54/149 (36%), Gaps = 21/149 (14%)

Query: 4   GNVFMSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
               M   +  A+ A       P VGAV V   +I+    +          HAE+ A+ +
Sbjct: 13  DREMMQRCITLARKALGATSPNPMVGAVIVREQEIVGEGFH----PGAGQPHAEVFALSV 68

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
                         +Y+ LEPC        C  A+  A I ++  G  +P       G +
Sbjct: 69  AAEKA-----KGATIYINLEPCNHYGRTPPCTEALIKAGIAKVMVGMIDPDPRVSGKGIE 123

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDF 144
             T A      E+  GI E+  R++ + F
Sbjct: 124 RLTEAG----IEVVAGIEEEACRRLNEGF 148


>gi|56551372|ref|YP_162211.1| riboflavin biosynthesis protein RibD [Zymomonas mobilis subsp.
           mobilis ZM4]
 gi|56542946|gb|AAV89100.1| riboflavin biosynthesis protein RibD [Zymomonas mobilis subsp.
           mobilis ZM4]
          Length = 323

 Score = 90.7 bits (225), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 32/157 (20%), Positives = 59/157 (37%), Gaps = 24/157 (15%)

Query: 1   MKKGNVFMSCALEEAQ--NAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEIL 57
           ++    +M  A+   +           VG + V  +N+II R   ++        HAE +
Sbjct: 4   LENDIRWMQAAIALGERSKGLTAPSPSVGCIIVNKDNQIIGRGWTQSGGR----PHAEAM 59

Query: 58  AIRMGCRILSQEILPEVDLYVTLEPC-------TMCAAAISLARIRRLYYGASNPKGGGI 110
           A+         + L    +YVTLEPC         C+ ++  A+  R+     +P     
Sbjct: 60  ALSQ------CQSLKGATVYVTLEPCAHKSNRGPTCSDSLVAAQPERVVIACRDPDPRTN 113

Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
             G      A      ++  G+ E+++ Q +  FF  
Sbjct: 114 GQGISKMVAAG----IKVECGLLEKQAAQSMSGFFSR 146


>gi|329118503|ref|ZP_08247207.1| riboflavin biosynthesis protein RibD [Neisseria bacilliformis ATCC
           BAA-1200]
 gi|327465238|gb|EGF11519.1| riboflavin biosynthesis protein RibD [Neisseria bacilliformis ATCC
           BAA-1200]
          Length = 374

 Score = 90.7 bits (225), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 36/151 (23%), Positives = 54/151 (35%), Gaps = 21/151 (13%)

Query: 2   KKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
                 M  AL  A+      +  P VG V     +I+ +  +          HAE+ A+
Sbjct: 10  DTDRRHMRTALALAREGRFTTSPNPRVGCVIARGGQIVGQGFHLRAGE----PHAEVHAL 65

Query: 60  RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113
           R    +           YVTLEPC        CA A+  A + R+    S+P       G
Sbjct: 66  RQAGELA-----RGATAYVTLEPCAHHGRTPPCAQALIAAGVSRVVAAVSDPNPQVAGKG 120

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
                LA    + E   G+ E  +R++   F
Sbjct: 121 --LAMLAAAGIAAEC--GLFEAEARELNHGF 147


>gi|320354106|ref|YP_004195445.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase;
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Desulfobulbus propionicus DSM 2032]
 gi|320122608|gb|ADW18154.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase;
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Desulfobulbus propionicus DSM 2032]
          Length = 368

 Score = 90.4 bits (224), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 38/145 (26%), Positives = 54/145 (37%), Gaps = 21/145 (14%)

Query: 4   GNVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
              +M  AL EA+    R      VGAV V + K++ R  +        T HAE+ A+  
Sbjct: 5   HEWYMELALAEARKGLGRTSPNPAVGAVVVKDGKVVGRGYHHRA----GTPHAEVHALAD 60

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
                         +YVTLEPC        C  AI  A I  +  G ++P       G  
Sbjct: 61  AG-----PQARGATIYVTLEPCNHTGRTPPCTEAILAAGIAMVVIGMADPNPRVAGGGAA 115

Query: 116 FYTLATCHHSPEIYPGISEQRSRQI 140
           +          E+  G+ EQ  R +
Sbjct: 116 YLRQRGL----EVVSGVLEQPCRAL 136


>gi|190891194|ref|YP_001977736.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Rhizobium etli
           CIAT 652]
 gi|190696473|gb|ACE90558.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase protein
           [Rhizobium etli CIAT 652]
          Length = 455

 Score = 90.4 bits (224), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 29/142 (20%), Positives = 47/142 (33%), Gaps = 21/142 (14%)

Query: 3   KGNVFMSCALEEAQN--AALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
               FM+ A+  ++           VG + V +  I+ +A            HAE  A+ 
Sbjct: 6   DDEGFMAAAIRLSRQHLGRTATNPSVGCLIVKDGVIVGQA----VTALGGRPHAEPQALA 61

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
              ++           YVTLEPC        CA A+    + R+    ++P       G 
Sbjct: 62  EAGQLA-----RGATAYVTLEPCSHHGKTPPCAEALIAYGVARVVISVTDPDPRVSGRGI 116

Query: 115 QFYTLATCHHSPEIYPGISEQR 136
                A      E+  G+ E  
Sbjct: 117 TMLRDAG----IEVDAGVLEAE 134


>gi|167816999|ref|ZP_02448679.1| riboflavin biosynthesis protein RibD [Burkholderia pseudomallei 91]
          Length = 369

 Score = 90.4 bits (224), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 32/145 (22%), Positives = 52/145 (35%), Gaps = 18/145 (12%)

Query: 8   MSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M  AL  A          P VG V V ++ +I     +         HAE+ A++   R 
Sbjct: 1   MQRALALAARGMYTTTPNPRVGCVIVKDDVVIGEGFTQPAGQD----HAEVQALKDA-RA 55

Query: 66  LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
                L +  +YVTLEPC        CA  +  AR+ ++     +P       G      
Sbjct: 56  RGN-DLRDATVYVTLEPCSHFGRTPPCAHTLIDARVGKVVAAMEDPNPQVSGRGLAMLRD 114

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDF 144
           A      ++  G+    + ++   F
Sbjct: 115 AG----IDVRCGLLAHEAHEMNIGF 135


>gi|21225535|ref|NP_631314.1| hypothetical protein SCO7258 [Streptomyces coelicolor A3(2)]
 gi|256783445|ref|ZP_05521876.1| hypothetical protein SlivT_03045 [Streptomyces lividans TK24]
 gi|289767322|ref|ZP_06526700.1| conserved hypothetical protein [Streptomyces lividans TK24]
 gi|4835337|emb|CAB42959.1| hypothetical protein [Streptomyces coelicolor A3(2)]
 gi|289697521|gb|EFD64950.1| conserved hypothetical protein [Streptomyces lividans TK24]
          Length = 161

 Score = 90.4 bits (224), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 34/151 (22%), Positives = 58/151 (38%), Gaps = 11/151 (7%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +   +E A  A    + P G+V V  +  +++   NR     D T H E    R     L
Sbjct: 11  LRRCVELAAQALEAGDEPFGSVLVGADGSVLAEDHNRV-ASGDRTRHPEFELARWSAARL 69

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPK-GGGIENGTQFYTLATCHHS 125
           + +      +Y + E C MCAAA +   + R+ Y AS+ +  G +E              
Sbjct: 70  TPDERAAATVYTSGEHCPMCAAAHAWVGLGRIVYVASSEQLAGWLEELGVPAAPVRPLPV 129

Query: 126 PEIYPGI--------SEQRSRQIIQDFFKER 148
            E+ PG+          +    + + F+  R
Sbjct: 130 REVAPGVTVEGPVPQLTREIHALHRRFYAGR 160


>gi|330815804|ref|YP_004359509.1| Pyrimidine reductase, riboflavin biosynthesis [Burkholderia
           gladioli BSR3]
 gi|327368197|gb|AEA59553.1| Pyrimidine reductase, riboflavin biosynthesis [Burkholderia
           gladioli BSR3]
          Length = 372

 Score = 90.4 bits (224), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 33/151 (21%), Positives = 54/151 (35%), Gaps = 18/151 (11%)

Query: 2   KKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
           +     M  AL+ +       +  P VG V V +  +I     +         HAE+ A+
Sbjct: 4   ESDFAHMQRALDLSSRGMYTTSPNPRVGCVIVKDEVVIGEGYTQPAGQD----HAEVQAM 59

Query: 60  RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113
           +          L    +YVTLEPC        CA  +  AR+ ++     +P       G
Sbjct: 60  KDA--RSRGHDLRGATVYVTLEPCSHFGRTPPCALGLIDARVAKVVAAMEDPNPLVSGKG 117

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
                 A      E+  G+  Q +R++   F
Sbjct: 118 LGMLRDAG----IEVRCGLLAQEAREMNIGF 144


>gi|309378405|emb|CBX22958.1| unnamed protein product [Neisseria lactamica Y92-1009]
          Length = 369

 Score = 90.4 bits (224), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 34/159 (21%), Positives = 56/159 (35%), Gaps = 24/159 (15%)

Query: 2   KKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
           +     M  AL+ A       +  P VG V     +++ +  +          HAE+ A+
Sbjct: 4   ETDISMMQNALKLAALGRFSTSPNPRVGCVIAQGGQVVGQGFHVKAGE----PHAEVHAL 59

Query: 60  RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113
           R    +           +VTLEPC        CA A+  A + R+     +P       G
Sbjct: 60  RQAGEMA-----KGATAFVTLEPCSHYGRTPPCAEALVRAGVSRVVAAMRDPNPLVAGKG 114

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDF---FKERR 149
                 A      E   G+ E  +R++ + F    + RR
Sbjct: 115 LALLEAAGI--KTEC--GLLESEARELNRGFLSRIERRR 149


>gi|323164205|gb|EFZ50012.1| riboflavin biosynthesis protein RibD [Shigella sonnei 53G]
 gi|323170496|gb|EFZ56146.1| riboflavin biosynthesis protein RibD [Escherichia coli LT-68]
          Length = 361

 Score = 90.4 bits (224), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 36/150 (24%), Positives = 56/150 (37%), Gaps = 21/150 (14%)

Query: 8   MSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M+ AL+ AQ      +  P VG V V + +I+    ++         HAE+ A+RM    
Sbjct: 1   MARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGE----PHAEVHALRMAGEK 56

Query: 66  LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
                      YVTLEPC        C  A+  A + R+     +P       G      
Sbjct: 57  A-----KGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVAAMQDPNPQVAGRGLYRLQQ 111

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
           A      ++  G+    + Q+ + F K  R
Sbjct: 112 AG----IDVSHGLMMSEAEQLNKGFLKRMR 137


>gi|108805629|ref|YP_645566.1| CMP/dCMP deaminase [Rubrobacter xylanophilus DSM 9941]
 gi|108766872|gb|ABG05754.1| CMP/dCMP deaminase, zinc-binding protein [Rubrobacter xylanophilus
           DSM 9941]
          Length = 194

 Score = 90.4 bits (224), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 28/149 (18%), Positives = 53/149 (35%), Gaps = 12/149 (8%)

Query: 8   MSCALEEAQNAAL-RNEIPVGAVAVLN--NKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           M  A+E ++     R   P GA        ++++   N         AHAE++AI +  R
Sbjct: 32  MRLAVELSRLNVEHRTGGPFGAAIFEEESGRLLAPGVNLVVPSSCSVAHAEVVAIMVAQR 91

Query: 65  ILSQEILPE-----VDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
            L    L         L+ + EPC MC  A + + +R L  GA +     +         
Sbjct: 92  SLGHFDLGGPGMPRYQLFASTEPCAMCFGATTWSGVRSLVCGARDEDARAVGFDEGAKVE 151

Query: 120 ATC----HHSPEIYPGISEQRSRQIIQDF 144
                       +   +  + +  +++ +
Sbjct: 152 RWISALEERGISVRRDVLREEAAAVLRRY 180


>gi|66823805|ref|XP_645257.1| hypothetical protein DDB_G0272442 [Dictyostelium discoideum AX4]
 gi|60473427|gb|EAL71373.1| hypothetical protein DDB_G0272442 [Dictyostelium discoideum AX4]
          Length = 241

 Score = 90.4 bits (224), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 33/142 (23%), Positives = 56/142 (39%), Gaps = 15/142 (10%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMG 62
              +M  AL++A     +     GA  V  N  ++  A N     +    H EI AI   
Sbjct: 65  HEKYMRIALDKAIEHNSK----FGAAIVHKNGTLMCTAANTGEGSR--ILHGEIRAILNC 118

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA-- 120
            ++  QE   +  +Y T EPC MC+AA+   +  ++ +G+           TQ    A  
Sbjct: 119 TQLYQQETWEDYYMYTTGEPCPMCSAALLWTKFEKVIFGSFISNMYCERCFTQLPMDADR 178

Query: 121 ------TCHHSPEIYPGISEQR 136
                   +H+  +  G+ E +
Sbjct: 179 IFRLGYGINHNAVLIGGVLESQ 200


>gi|152981769|ref|YP_001352932.1| cytosine/adenosine deaminase [Janthinobacterium sp. Marseille]
 gi|151281846|gb|ABR90256.1| cytosine/adenosine deaminase [Janthinobacterium sp. Marseille]
          Length = 169

 Score = 90.4 bits (224), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 37/158 (23%), Positives = 60/158 (37%), Gaps = 15/158 (9%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRE-LKDVTAHAEILAI 59
            +    +  ++  ++ +  R   P  A+       +I  AGN +     D T HAE+LA 
Sbjct: 14  TRDLELLRQSIALSEESKQRGRHPFAALVADEHGNVIVTAGNNSMPPEGDPTQHAELLAA 73

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
               + LS E L +  LY + EPC MC+ AI    I R+ Y  S     G+         
Sbjct: 74  ARAAQKLSPEQLAKSTLYTSAEPCCMCSGAIYWTGIGRVVYALSEHNLLGLTG--DHPEN 131

Query: 120 ATC-----------HHSPEIYPGISEQRSRQIIQDFFK 146
            T                E+   + E  + +  + F+K
Sbjct: 132 PTFSLPCREVFVRGQRQVEVVGPLLEDEAAKAHEGFWK 169


>gi|110804436|ref|YP_687956.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Shigella flexneri 5 str. 8401]
 gi|110613984|gb|ABF02651.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Shigella
           flexneri 5 str. 8401]
 gi|332760694|gb|EGJ90982.1| riboflavin biosynthesis protein RibD [Shigella flexneri 4343-70]
 gi|333008609|gb|EGK28077.1| riboflavin biosynthesis protein RibD [Shigella flexneri VA-6]
          Length = 361

 Score = 90.4 bits (224), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 36/150 (24%), Positives = 56/150 (37%), Gaps = 21/150 (14%)

Query: 8   MSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M+ AL+ AQ      +  P VG V V + +I+    ++         HAE+ A+RM    
Sbjct: 1   MARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGE----PHAEVHALRMAGEK 56

Query: 66  LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
                      YVTLEPC        C  A+  A + R+     +P       G      
Sbjct: 57  A-----KGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVAAMQDPNPQVAGRGLYRLQQ 111

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
           A      ++  G+    + Q+ + F K  R
Sbjct: 112 AG----IDVSHGLMMSEAEQLNKGFLKRMR 137


>gi|226200200|ref|ZP_03795745.1| riboflavin biosynthesis protein RibD [Burkholderia pseudomallei
           Pakistan 9]
 gi|225927708|gb|EEH23750.1| riboflavin biosynthesis protein RibD [Burkholderia pseudomallei
           Pakistan 9]
          Length = 384

 Score = 90.4 bits (224), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 34/148 (22%), Positives = 51/148 (34%), Gaps = 21/148 (14%)

Query: 8   MSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M+ AL  A+           VG V     + +    +R         HAE+ A+R     
Sbjct: 1   MAHALRLAEQGLYTTHPNPRVGCVIARGARTLGAGWHRRAGE----PHAEVHALREAG-- 54

Query: 66  LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
              E       YVTLEPC        CA A+  A + R+   A +P       G      
Sbjct: 55  ---ERARGATAYVTLEPCAHFGRTPPCANALVAAGVARVVIAARDPFEQVAGRGAARLAD 111

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKE 147
           A       +  G+   ++R++   FF  
Sbjct: 112 AG----IVVEQGLLAAQARELNIGFFSR 135


>gi|110640675|ref|YP_668403.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Escherichia coli 536]
 gi|306813120|ref|ZP_07447313.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Escherichia coli NC101]
 gi|110342267|gb|ABG68504.1| riboflavin biosynthesis protein RibD [Escherichia coli 536]
 gi|305853883|gb|EFM54322.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Escherichia coli NC101]
 gi|307552319|gb|ADN45094.1| riboflavin biosynthesis protein RibD [Escherichia coli ABU 83972]
          Length = 361

 Score = 90.4 bits (224), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 36/150 (24%), Positives = 56/150 (37%), Gaps = 21/150 (14%)

Query: 8   MSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M+ AL+ AQ      +  P VG V V + +I+    ++         HAE+ A+RM    
Sbjct: 1   MARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGE----PHAEVHALRMAGEK 56

Query: 66  LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
                      YVTLEPC        C  A+  A + R+     +P       G      
Sbjct: 57  A-----KGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVAAMQDPNPQVAGRGLYRLQQ 111

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
           A      ++  G+    + Q+ + F K  R
Sbjct: 112 AG----IDVSHGLMMSEAEQLNKGFLKRMR 137


>gi|224067884|ref|XP_002302581.1| predicted protein [Populus trichocarpa]
 gi|222844307|gb|EEE81854.1| predicted protein [Populus trichocarpa]
          Length = 378

 Score = 90.0 bits (223), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 37/148 (25%), Positives = 63/148 (42%), Gaps = 23/148 (15%)

Query: 6   VFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
            +M   +E A+ A    +  P VG V V + KI+    +     K    HAE+ A+R   
Sbjct: 29  FYMRRCVELARKAIGCTSPNPMVGCVIVKDGKIVGEGFH----PKAGQPHAEVFALRDA- 83

Query: 64  RILSQEILPE-VDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116
                E L E    YV+LEPC        C+ A+  A+++++  G  +P       G Q 
Sbjct: 84  -----EDLAENATAYVSLEPCNHYGRTPPCSEALVKAKVKKVVIGMIDPNPIVASRGVQR 138

Query: 117 YTLATCHHSPEIYPGISEQRSRQIIQDF 144
              A  +    +  G+ E+  +++ + F
Sbjct: 139 LRDAGIN----VVVGVEEELCKRLNEAF 162


>gi|116493546|ref|YP_805281.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Pediococcus pentosaceus ATCC 25745]
 gi|116103696|gb|ABJ68839.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Pediococcus
           pentosaceus ATCC 25745]
          Length = 353

 Score = 90.0 bits (223), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 32/124 (25%), Positives = 51/124 (41%), Gaps = 15/124 (12%)

Query: 7   FMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           +M+ A E A+         P VGAV V NN ++++  +         AHAEI A++    
Sbjct: 9   YMNLAFEMAEKGKYQTWTNPLVGAVIVKNNVVLAKGYHHQFGA----AHAEIDALQH--- 61

Query: 65  ILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
           +   +      +YV+LEPC        CA  ++   I+ +  G  +P       G Q   
Sbjct: 62  LDDLKQARGATMYVSLEPCSHFGKTPPCAKKLAEVGIKAVVVGQKDPNPLVAGRGLQILR 121

Query: 119 LATC 122
            A  
Sbjct: 122 DAGI 125


>gi|319408448|emb|CBI82103.1| Riboflavin biosynthesis protein ribD [Bartonella schoenbuchensis
           R1]
          Length = 375

 Score = 90.0 bits (223), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 34/154 (22%), Positives = 58/154 (37%), Gaps = 25/154 (16%)

Query: 3   KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNK----IISRAGNRNRELKDVTAHAEI 56
           + N FM+ A+  AQ    L  + P VGA+ V ++     I+               HAE+
Sbjct: 7   QDNRFMAAAIRLAQRHIGLTGQNPSVGALIVRDDDGKASIVGYG----VTAIHGRPHAEV 62

Query: 57  LAIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGI 110
            A+ M   +           YVTLEPC+       C  A+  + I R+    ++P     
Sbjct: 63  QALLMAGPLSH-----GATAYVTLEPCSHYGETSPCVNALIDSGISRVVIALTDPDKRVC 117

Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
             G      A      E+  G+  + + + +  +
Sbjct: 118 GRGIALLRAAG----IEVVEGVLAREAFETLSAY 147


>gi|82701141|ref|YP_410707.1| riboflavin biosynthesis protein RibD [Nitrosospira multiformis ATCC
           25196]
 gi|82409206|gb|ABB73315.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Nitrosospira
           multiformis ATCC 25196]
          Length = 366

 Score = 90.0 bits (223), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 32/150 (21%), Positives = 52/150 (34%), Gaps = 21/150 (14%)

Query: 3   KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
               FM+ AL  A+      +  P VG V V + +++    +         AHAEI    
Sbjct: 5   TDYRFMAQALRLAEKGLYSTSPNPRVGCVLVRDGQVVGTGWHERAGE----AHAEIN--- 57

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
                 +         Y+TLEPC        CA A+  A + ++     +P       G 
Sbjct: 58  --ALAAAGPAARGALAYLTLEPCSHYGRTPPCADALVQAGVAKVITAMQDPNPLVAGRGC 115

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
                A      E+  G+ E  ++ +   F
Sbjct: 116 ALLEEAG----IEVKTGLMEAEAKALNIGF 141


>gi|212528944|ref|XP_002144629.1| conserved hypothetical protein [Penicillium marneffei ATCC 18224]
 gi|210074027|gb|EEA28114.1| conserved hypothetical protein [Penicillium marneffei ATCC 18224]
          Length = 162

 Score = 90.0 bits (223), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 28/102 (27%), Positives = 43/102 (42%), Gaps = 1/102 (0%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRM 61
               ++   +  A+ A    + P G+V V    +II    NR     DVT H E      
Sbjct: 5   NDINYLRRCVVLAREALEAGDAPFGSVLVNAAGEIIKEDRNRVVTQADVTWHPEFTLAGW 64

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
             + L+Q       +Y + E C MCA A + A + R+ Y +S
Sbjct: 65  AQKNLTQTERAAATVYTSGEHCPMCATAHAYAGLGRIVYASS 106


>gi|224009578|ref|XP_002293747.1| predicted protein [Thalassiosira pseudonana CCMP1335]
 gi|220970419|gb|EED88756.1| predicted protein [Thalassiosira pseudonana CCMP1335]
          Length = 256

 Score = 90.0 bits (223), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 38/159 (23%), Positives = 54/159 (33%), Gaps = 21/159 (13%)

Query: 2   KKGNVFMSCALEEAQNAALRN--EIPVGAVAVLNNK----IISRAGNRNRELKDVTAHAE 55
                 M  A+  A+           VG V V +      II    +     K    HAE
Sbjct: 99  TSDVQHMKLAVRLARIGYGNTFPNPAVGCVLVSHGDDSSSIIGSGFH----PKAGMPHAE 154

Query: 56  ILAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGG 109
           + A+   C          V  YVTLEPC        CA ++ +A I R+  G  +P    
Sbjct: 155 VFALLEACGHDHFAD-SNVTAYVTLEPCCHEGQTPPCALSLVVAGINRVVVGFRDPNPRV 213

Query: 110 IENGTQFYTLATCH-HSPEIYPGISEQRSRQIIQDFFKE 147
              G Q    A    H  E+      Q   ++++ F K 
Sbjct: 214 DGGGIQLLKDAGIDVHVMEVES---AQECTKLVEYFVKR 249


>gi|120553775|ref|YP_958126.1| riboflavin biosynthesis protein RibD [Marinobacter aquaeolei VT8]
 gi|120323624|gb|ABM17939.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Marinobacter aquaeolei VT8]
          Length = 363

 Score = 90.0 bits (223), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 30/148 (20%), Positives = 49/148 (33%), Gaps = 21/148 (14%)

Query: 8   MSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M+ A++ A       +  P VG V    + I+    +         AHAE+ A+      
Sbjct: 2   MARAVQLAWRGRYSTHPNPRVGCVIAKGDLIVGEGWHERAGE----AHAEVRALSQAGHE 57

Query: 66  LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
                      YVTLEPC        CA A+  A +  ++    +P       G      
Sbjct: 58  A-----RGATAYVTLEPCSHYGRTPPCARALIDAGVAHVFAATKDPNPSVSGRGLDMLRE 112

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKE 147
           A       +  G+    + ++   F K 
Sbjct: 113 AG----IRVTEGVMADEAARLNPGFMKR 136


>gi|320661180|gb|EFX28611.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Escherichia coli O55:H7 str. USDA 5905]
          Length = 361

 Score = 90.0 bits (223), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 36/150 (24%), Positives = 56/150 (37%), Gaps = 21/150 (14%)

Query: 8   MSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M+ AL+ AQ      +  P VG V V + +I+    ++         HAE+ A+RM    
Sbjct: 1   MARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGE----PHAEVHALRMAGEK 56

Query: 66  LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
                      YVTLEPC        C  A+  A + R+     +P       G      
Sbjct: 57  A-----KGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVAAMQDPNPQVAGRGLYRLQQ 111

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
           A      ++  G+    + Q+ + F K  R
Sbjct: 112 AG----IDVSHGLMMSEAEQLNKGFLKRMR 137


>gi|238760662|ref|ZP_04621787.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Yersinia aldovae
           ATCC 35236]
 gi|238701127|gb|EEP93719.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Yersinia aldovae
           ATCC 35236]
          Length = 369

 Score = 90.0 bits (223), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 36/157 (22%), Positives = 55/157 (35%), Gaps = 21/157 (13%)

Query: 1   MKKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           M+    +M+ A E A+      +  P VG V V   +I+    +          HAE+ A
Sbjct: 1   MQPDEFYMARAFELARLGRFTTSPNPNVGCVLVREGEIVGEGYHLRAGE----PHAEVHA 56

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
           +RM               YVTLEPC        CA A+  A + R+     +P       
Sbjct: 57  LRMAGEKA-----RGATAYVTLEPCSHHGRTPPCADALVAAGVVRVVAAMQDPNPQVAGR 111

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
           G      A       +  G+    +  + + F K  R
Sbjct: 112 GLYLLKQAG----IAVDHGVMLAEAEAVNRGFLKRMR 144


>gi|302549165|ref|ZP_07301507.1| cytidine/deoxycytidylate deaminase [Streptomyces viridochromogenes
           DSM 40736]
 gi|302466783|gb|EFL29876.1| cytidine/deoxycytidylate deaminase [Streptomyces viridochromogenes
           DSM 40736]
          Length = 161

 Score = 90.0 bits (223), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 33/151 (21%), Positives = 58/151 (38%), Gaps = 17/151 (11%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           ++   +E A  A    + P G+V V  +  ++    NR     D T H E    R     
Sbjct: 10  YLRRCVELAAEALDAGDEPFGSVLVGGDGTVLGEDHNRV-ASGDHTRHPEFELARWSASH 68

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           L+ E      +Y + E C MCAAA +   + R+ Y AS+ +   + +      +      
Sbjct: 69  LTPEERAAATVYTSGEHCPMCAAAHAWVGLGRIVYVASSEQ---LASWLDELGVPAPPVR 125

Query: 126 P----EIYPGI--------SEQRSRQIIQDF 144
                ++ PG+          +R R++   F
Sbjct: 126 TLPVHDVAPGVVVDGPVPELAERIRELHARF 156


>gi|302879548|ref|YP_003848112.1| riboflavin biosynthesis protein RibD [Gallionella capsiferriformans
           ES-2]
 gi|302582337|gb|ADL56348.1| riboflavin biosynthesis protein RibD [Gallionella capsiferriformans
           ES-2]
          Length = 366

 Score = 90.0 bits (223), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 31/150 (20%), Positives = 54/150 (36%), Gaps = 21/150 (14%)

Query: 3   KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           + + +M+ AL+ A+      +  P VG V V +  ++    ++         HAE+ A+ 
Sbjct: 5   EDSRWMAQALQLAERGLYSTSPNPRVGCVLVRDGNLLGAGWHKKAGE----PHAEVYALL 60

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
                           YVTLEPC        C  A+  A + R+     +P       G 
Sbjct: 61  DAGDAAH-----GATAYVTLEPCSHYGRTPPCCDALIHAGVARVVVAMQDPNPQVAGRGI 115

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
                A       +  G+ E  +R++   F
Sbjct: 116 AKLRAAG----ISVDCGLMEAAARELNAGF 141


>gi|320656030|gb|EFX23946.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Escherichia coli O55:H7 str. 3256-97 TW
           07815]
 gi|320665156|gb|EFX32249.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Escherichia coli O157:H7 str. LSU-61]
          Length = 361

 Score = 90.0 bits (223), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 36/150 (24%), Positives = 56/150 (37%), Gaps = 21/150 (14%)

Query: 8   MSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M+ AL+ AQ      +  P VG V V + +I+    ++         HAE+ A+RM    
Sbjct: 1   MARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGE----PHAEVHALRMAGEK 56

Query: 66  LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
                      YVTLEPC        C  A+  A + R+     +P       G      
Sbjct: 57  A-----KGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVAAMQDPNPQVAGRGLYRLQQ 111

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
           A      ++  G+    + Q+ + F K  R
Sbjct: 112 AG----IDVSHGLMMSEAEQLNKGFLKRMR 137


>gi|260434096|ref|ZP_05788067.1| riboflavin biosynthesis protein RibD [Silicibacter lacuscaerulensis
           ITI-1157]
 gi|260417924|gb|EEX11183.1| riboflavin biosynthesis protein RibD [Silicibacter lacuscaerulensis
           ITI-1157]
          Length = 366

 Score = 90.0 bits (223), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 28/148 (18%), Positives = 50/148 (33%), Gaps = 25/148 (16%)

Query: 2   KKGNVFMSCALEEAQNAALRN----EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57
                +M+ AL   +    +        VG V V N +I+ R   +         HAE +
Sbjct: 3   DTDKRYMALALSLGRRG--QGMCWPNPAVGCVVVKNGRIVGRGWTQPGGR----PHAETV 56

Query: 58  AIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIE 111
           A+     +           YV+LEPC        CA A+  A + R+     +       
Sbjct: 57  ALAQAGLLA-----RGSTAYVSLEPCAHHGKTPPCAQALIDAGVARVVSAIEDSDPRVAG 111

Query: 112 NGTQFYTLATCHHSPEIYPGISEQRSRQ 139
            G +    A      ++  G+   ++ +
Sbjct: 112 LGFEMLRAAG----VDVTTGVLADQAAR 135


>gi|296126557|ref|YP_003633809.1| riboflavin biosynthesis protein RibD [Brachyspira murdochii DSM
           12563]
 gi|296018373|gb|ADG71610.1| riboflavin biosynthesis protein RibD [Brachyspira murdochii DSM
           12563]
          Length = 368

 Score = 90.0 bits (223), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 41/163 (25%), Positives = 63/163 (38%), Gaps = 29/163 (17%)

Query: 2   KKGNVFMSCALEEAQNAALRNEI-----P-VGAVAVLNNKIISRAGNRNRELKDVTAHAE 55
                +M  A+EEA+      E      P VGAV V ++KII    ++         HAE
Sbjct: 4   NTHEKYMRMAIEEAKK----GEGFTSPNPLVGAVIVKDDKIIGIGYHQKYGEN----HAE 55

Query: 56  ILAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGG 109
           I A     +    E +    +YVTLEPC        CA AI   +I+++  G  +     
Sbjct: 56  INAFLDAQKK--GEDVEGAAIYVTLEPCSHYGKTPPCADAIIKNKIKKVIIGCVDSNPKV 113

Query: 110 IENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF---KERR 149
             NG +    A       +      +  R++ + FF     +R
Sbjct: 114 AGNGIKKLKDAGIEVVVNVLE----EECRKLNEVFFYYIANKR 152


>gi|328876514|gb|EGG24877.1| cytidine deaminase-like protein [Dictyostelium fasciculatum]
          Length = 504

 Score = 90.0 bits (223), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 21/67 (31%), Positives = 40/67 (59%)

Query: 76  LYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQ 135
           LY++ EPC MC+ A+  +RI R+ YG+    GGG+ +  + +T  + +H  ++Y G+ E+
Sbjct: 390 LYLSREPCVMCSMALVHSRIERVIYGSQQHNGGGLGSCFRIHTEKSVNHKFQVYRGLMEK 449

Query: 136 RSRQIIQ 142
              ++  
Sbjct: 450 ECLELFS 456



 Score = 40.3 bits (94), Expect = 0.080,   Method: Composition-based stats.
 Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 6/42 (14%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNN---KIISR 39
           MK+   +M  A+E+A  A  +   P+G V V  N    IIS 
Sbjct: 250 MKQ---YMKLAIEQANIAKSKGYRPIGGVLVDPNTNTTIISS 288


>gi|307543864|ref|YP_003896343.1| hypothetical protein HELO_1275 [Halomonas elongata DSM 2581]
 gi|307215888|emb|CBV41158.1| hypothetical protein HELO_1275 [Halomonas elongata DSM 2581]
          Length = 157

 Score = 90.0 bits (223), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 27/103 (26%), Positives = 41/103 (39%), Gaps = 2/103 (1%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIR 60
                 +   +  A  A    + P G+V V  + K+++   NR     D T H E    R
Sbjct: 4   DTDMAHLRRCVALAAEALEHGDEPFGSVLVGADGKVLAEDRNR-IAGGDSTRHPEFALAR 62

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
                L  E      +Y + E C MCAAA +   + R+ Y +S
Sbjct: 63  WAAENLPAESRAAATVYTSGEHCPMCAAAHAWVGLGRIVYASS 105


>gi|170783175|ref|YP_001711509.1| riboflavin biosynthesis protein RibD [Clavibacter michiganensis
           subsp. sepedonicus]
 gi|169157745|emb|CAQ02947.1| riboflavin biosynthesis protein RibD [Clavibacter michiganensis
           subsp. sepedonicus]
          Length = 355

 Score = 90.0 bits (223), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 35/143 (24%), Positives = 54/143 (37%), Gaps = 21/143 (14%)

Query: 8   MSCALEEAQNAALRNEIP-VGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M   LE A         P VG V +  + ++I+   +R       +AHAE+ A+R     
Sbjct: 24  MRRGLELAAEGPAWGPNPRVGCVILDASGRVIAEGRHR----GAGSAHAEVDALRQ---- 75

Query: 66  LSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
           L           VTLEPC        CAAA+  A + R+ Y  ++P         +    
Sbjct: 76  LPAGGARGATAVVTLEPCNHTGRTGPCAAALVEAGVARVAYAVADPGAESSGGAARLRAA 135

Query: 120 ATCHHSPEIYPGISEQRSRQIIQ 142
                  E+ PG+    +   +Q
Sbjct: 136 -----GVEVVPGVLADEAAAFLQ 153


>gi|300312948|ref|YP_003777040.1| bifunctional diaminohydroxyphosphoribosyl aminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino) uracil
           reductase [Herbaspirillum seropedicae SmR1]
 gi|300075733|gb|ADJ65132.1| bifunctional enzyme: diaminohydroxyphosphoribosyl aminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino) uracil
           reductase protein [Herbaspirillum seropedicae SmR1]
          Length = 354

 Score = 89.6 bits (222), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 39/151 (25%), Positives = 56/151 (37%), Gaps = 20/151 (13%)

Query: 8   MSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           M+ AL +A    L +  P   VG V V + +II     +         HAEI A+     
Sbjct: 1   MALALIQAGFGML-DTTPNPRVGCVIVKDQRIIGAGFTQPPGGN----HAEIQAMADAAA 55

Query: 65  ILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
                      +YVTLEPC        CA A+  A + R+    ++P       G     
Sbjct: 56  RGHDVR--GATVYVTLEPCSHFGRTPPCADALIRAGVARVVAAIADPNPMVAGQGLARLQ 113

Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
            A      E+  G+ E+ +R I   F    R
Sbjct: 114 AAG----IEVSCGLLEEEARDINIGFLHRMR 140


>gi|220912436|ref|YP_002487745.1| riboflavin biosynthesis protein RibD [Arthrobacter chlorophenolicus
           A6]
 gi|219859314|gb|ACL39656.1| riboflavin biosynthesis protein RibD [Arthrobacter chlorophenolicus
           A6]
          Length = 373

 Score = 89.6 bits (222), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 36/152 (23%), Positives = 55/152 (36%), Gaps = 21/152 (13%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  ALE A          VGAV V  + + ++   +R       TAHAE  A+       
Sbjct: 19  MEHALEAALQGPRGANPLVGAVVVSPDGRELATGYHR----GAGTAHAEADAV--ARARE 72

Query: 67  SQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
           +   L    + VTLEPC        C  AI  A I  + Y   +P               
Sbjct: 73  AGVDLAGCTMVVTLEPCNHVGRTGPCTEAIIAAGITDVVYAVDDPHDPAAGGAATL---- 128

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFF---KERR 149
             +    +  G++   S ++ + +F    E+R
Sbjct: 129 -RNAGISVRSGLAAAESLELNRRWFEAVAEKR 159


>gi|217978262|ref|YP_002362409.1| riboflavin biosynthesis protein RibD [Methylocella silvestris BL2]
 gi|217503638|gb|ACK51047.1| riboflavin biosynthesis protein RibD [Methylocella silvestris BL2]
          Length = 370

 Score = 89.6 bits (222), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 32/142 (22%), Positives = 49/142 (34%), Gaps = 21/142 (14%)

Query: 4   GNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
              FM+ A+  A+           VGA+ V +  +++R             HAE  A+R 
Sbjct: 7   DERFMAAAIALARRGLGVCAPNPAVGALIVKDGVVLARGW----TQAGGRPHAEAEALRQ 62

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
                         LYVTLEPC        CA A+  + I R+     +P       G +
Sbjct: 63  AGDKS-----RGSTLYVTLEPCSHHGKTPPCAEAVIASGIARVASAIEDPDPRVAGRGHE 117

Query: 116 FYTLATCHHSPEIYPGISEQRS 137
               A       +  G+  Q +
Sbjct: 118 LLRAAGL----IVRTGVCAQAA 135


>gi|255067329|ref|ZP_05319184.1| riboflavin biosynthesis protein RibD [Neisseria sicca ATCC 29256]
 gi|255048480|gb|EET43944.1| riboflavin biosynthesis protein RibD [Neisseria sicca ATCC 29256]
          Length = 365

 Score = 89.6 bits (222), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 33/149 (22%), Positives = 54/149 (36%), Gaps = 21/149 (14%)

Query: 4   GNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
               M  AL  A+      +  P VG V    ++I+ +  +          HAE+ A+R 
Sbjct: 6   DTQMMQNALALARLGRFSTSPNPRVGCVIAHGSQIVGQGFHVKAGE----PHAEVHALRQ 61

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
              +           YVTLEPC        CA A+  + + R+    ++P       G  
Sbjct: 62  AGEMA-----RGATAYVTLEPCSHYGRTPPCAEALIGSGVSRVVAAMTDPNPLVAGKGLA 116

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDF 144
               A      E   G+ E  +R++ + F
Sbjct: 117 MLEAAGI--RTE--SGLLETEARELNRGF 141


>gi|332529818|ref|ZP_08405772.1| cmp/dcmp deaminase zinc-binding protein [Hylemonella gracilis ATCC
           19624]
 gi|332040839|gb|EGI77211.1| cmp/dcmp deaminase zinc-binding protein [Hylemonella gracilis ATCC
           19624]
          Length = 158

 Score = 89.6 bits (222), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 37/152 (24%), Positives = 57/152 (37%), Gaps = 19/152 (12%)

Query: 8   MSCALEEAQNAALR-NEIPVGAVAVLNNK--IISRAGNRNRELKDVTAHAEILAIRMGCR 64
           +  A + A+ A       P GA+ V  +   +++  GN      D   HAE +  R    
Sbjct: 5   LKRANDVARRARDELGRHPFGAILVAPDGETVLAEQGNV-----DTVNHAESVLARTAAL 59

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI-ENGTQFYTL---- 119
               E L    L  T+EPC MCA     A I RL YG S  +   +  +  +  T+    
Sbjct: 60  NYPGEYLGRCTLVTTVEPCAMCAGTQYWANIGRLVYGLSERRLLALTGSHEENPTMDLPC 119

Query: 120 ----ATCHHSPEIYPGI--SEQRSRQIIQDFF 145
               A      E+   +   E     + +DF+
Sbjct: 120 RTVFAAGQKPIEVLGPVTEMEDEIAALHRDFW 151


>gi|253996924|ref|YP_003048988.1| riboflavin biosynthesis protein RibD [Methylotenera mobilis JLW8]
 gi|253983603|gb|ACT48461.1| riboflavin biosynthesis protein RibD [Methylotenera mobilis JLW8]
          Length = 372

 Score = 89.6 bits (222), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 28/121 (23%), Positives = 46/121 (38%), Gaps = 17/121 (14%)

Query: 2   KKGNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
              + +M+ AL  A       +    VG V V + +I+ +  +          HAE+ A+
Sbjct: 6   TSDHTYMNLALRLAAQGLYTTQPNPRVGCVIVRDQQIVGQGAHHKAGE----PHAEVFAL 61

Query: 60  RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113
           R    +         D+YVTLEPC        C  A+  A+ +R+     +P       G
Sbjct: 62  RQAGALA-----EGADVYVTLEPCSHFGRTPPCVQAVIAAKPKRVVIAMQDPNPLVAGRG 116

Query: 114 T 114
            
Sbjct: 117 V 117


>gi|254498335|ref|ZP_05111074.1| cytidine/deoxycytidylate deaminase [Legionella drancourtii LLAP12]
 gi|254352443|gb|EET11239.1| cytidine/deoxycytidylate deaminase [Legionella drancourtii LLAP12]
          Length = 157

 Score = 89.6 bits (222), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 38/151 (25%), Positives = 66/151 (43%), Gaps = 15/151 (9%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNN-KIISRAGNRNRELKDVTAHAEILAIRMGC 63
           + FM+  +E A +  +    P GA+ V ++ +I+ ++ N          H E+  I    
Sbjct: 6   HDFMTATIEIAASNPIA---PYGAIIVYDDKEILLKSVNS--AHHHPLMHGELSVIHTLF 60

Query: 64  RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI------ENGTQFY 117
                  + ++ LY T EPC MCAAAI  A I ++ YG S P    +         T+ +
Sbjct: 61  NKGFNGDVSKLSLYTTAEPCPMCAAAIYWAMIPKVVYGTSIPFLHDLFGRQIEVRATEIF 120

Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDFFKER 148
           +     ++ E+  G+ E    Q+   F K +
Sbjct: 121 SKTPNFYTCELVGGVKEAECNQL---FIKAK 148


>gi|84687686|ref|ZP_01015559.1| riboflavin biosynthesis protein RibD [Maritimibacter alkaliphilus
           HTCC2654]
 gi|84664269|gb|EAQ10760.1| riboflavin biosynthesis protein RibD [Rhodobacterales bacterium
           HTCC2654]
          Length = 367

 Score = 89.6 bits (222), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 35/147 (23%), Positives = 49/147 (33%), Gaps = 25/147 (17%)

Query: 3   KGNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
               FM  AL   +       +   P VG V V   +I+ R   +         HAE++A
Sbjct: 2   TDERFMDLALSLGRRGL--GSVWPNPAVGCVIVNGARIVGRGWTQPGGR----PHAEVVA 55

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
           +                 YVTLEPC        CA A+  A I R+     +P       
Sbjct: 56  LAQAGEAA-----RGATAYVTLEPCSHHGQTPPCAVALISAGIARVVVALGDPDNRVNGR 110

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQ 139
           G      A      E+  G+ E  +R 
Sbjct: 111 GIAMLRAAG----IEVVTGLGEAEARA 133


>gi|227872741|ref|ZP_03991064.1| hypothetical protein HMPREF6123_1003 [Oribacterium sinus F0268]
 gi|227841402|gb|EEJ51709.1| hypothetical protein HMPREF6123_1003 [Oribacterium sinus F0268]
          Length = 83

 Score = 89.2 bits (221), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 24/83 (28%), Positives = 35/83 (42%), Gaps = 19/83 (22%)

Query: 1  MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLN-------------------NKIISRAG 41
          MK    +M  AL  A+ AA R ++P+GA+ V +                     I+ R  
Sbjct: 1  MKTEKDYMKMALSLAKKAASRGDVPIGALIVYDGTKPDSPMGRLCQAKGILPGTILGRGY 60

Query: 42 NRNRELKDVTAHAEILAIRMGCR 64
          NR  +  +   H EILAI   C+
Sbjct: 61 NRRNQKNNALYHGEILAIEKACK 83


>gi|269213784|ref|ZP_05982845.2| riboflavin biosynthesis protein RibD [Neisseria cinerea ATCC 14685]
 gi|269145361|gb|EEZ71779.1| riboflavin biosynthesis protein RibD [Neisseria cinerea ATCC 14685]
          Length = 361

 Score = 89.2 bits (221), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 35/153 (22%), Positives = 57/153 (37%), Gaps = 24/153 (15%)

Query: 8   MSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M  AL+ A       +  P VG V    ++I+ +  +          HAE+ A+R    +
Sbjct: 2   MHQALDLAALGRFSTSPNPRVGCVIAHGSQIVGQGFHVKAGE----PHAEVHALRQAGEM 57

Query: 66  LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
                      +VTLEPC        CA A+  A + R+     +P       G      
Sbjct: 58  AQ-----GATAFVTLEPCSHYGRTPPCAKALIQAGVSRVVAAMRDPNPLVAGKGLALLEA 112

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDF---FKERR 149
           A      E   G+ E ++R++ + F    + RR
Sbjct: 113 AGI--KTEC--GLLENKARELNRGFLSRIERRR 141


>gi|256831920|ref|YP_003160647.1| riboflavin biosynthesis protein RibD [Jonesia denitrificans DSM
           20603]
 gi|256685451|gb|ACV08344.1| riboflavin biosynthesis protein RibD [Jonesia denitrificans DSM
           20603]
          Length = 354

 Score = 89.2 bits (221), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 35/112 (31%), Positives = 46/112 (41%), Gaps = 15/112 (13%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M+ ALE+A          VGAV V   +  + +   +R R     TAHAE+ A+R  C  
Sbjct: 1   MNVALEQAARGVRGANPLVGAVIVDEHSGDV-AVGHHRGR----GTAHAEVDALR--CAR 53

Query: 66  LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIE 111
                L    +YVTLEPC        C  AI  A I R+     +P      
Sbjct: 54  DRGLRLDAATMYVTLEPCNHYGVTPPCTDAILDAGIPRVVIAGEDPHDVAAG 105


>gi|218676953|ref|YP_002395772.1| Probable riboflavin biosynthesis protein [Vibrio splendidus LGP32]
 gi|218325221|emb|CAV27160.1| Probable riboflavin biosynthesis protein [Vibrio splendidus LGP32]
          Length = 145

 Score = 89.2 bits (221), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 35/149 (23%), Positives = 58/149 (38%), Gaps = 21/149 (14%)

Query: 4   GNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
              +M  ALE ++ A    +   PVG V V N+K++S    +         HAE+ A+  
Sbjct: 2   NQQYMLQALEASRQALPDCQPNPPVGCVLVKNDKVVSVGYTQKVGGN----HAEVEAL-N 56

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
           G    +   +  V  YVTLEPC        CA+ +  A ++ +     +P       G  
Sbjct: 57  GYDCETDGEMEGVTAYVTLEPCSFVGRTPACASTLVKAGVKHVVVAMLDPDPRNNGRGVA 116

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDF 144
                   H  ++  G+     ++ I  F
Sbjct: 117 ILES----HGVKVDVGL----CQEQISAF 137


>gi|113868804|ref|YP_727293.1| pyrimidine deaminase/reductase [Ralstonia eutropha H16]
 gi|113527580|emb|CAJ93925.1| pyrimidine deaminase/reductase [Ralstonia eutropha H16]
          Length = 371

 Score = 89.2 bits (221), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 30/125 (24%), Positives = 47/125 (37%), Gaps = 16/125 (12%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC-- 83
           VG V V + ++I +   +         HAEI A++                YVTLEPC  
Sbjct: 30  VGCVLVKDGQVIGQGFTQPAGQD----HAEIQAMKDALARGLDP--AGSTAYVTLEPCSH 83

Query: 84  ----TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139
                 CA A+  A + R+     +P       G Q    A      ++  G+ E+ +R 
Sbjct: 84  FGRTPPCADALVRAGVARVVAAMEDPNPSVSGRGLQRLREAG----VDVRCGLLEKEARD 139

Query: 140 IIQDF 144
           +   F
Sbjct: 140 LNIGF 144


>gi|290962921|ref|YP_003494103.1| guanine deaminase [Streptomyces scabiei 87.22]
 gi|260652447|emb|CBG75580.1| putative guanine deaminase [Streptomyces scabiei 87.22]
          Length = 226

 Score = 89.2 bits (221), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 37/155 (23%), Positives = 64/155 (41%), Gaps = 17/155 (10%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAIRM 61
              FM  A+E+A+        P GAV V     ++     N          H E +A+  
Sbjct: 65  HERFMRLAVEQARRNPA---WPFGAVIVATRTGRVPGSGVNS--GADSPLLHGEAVAMND 119

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY-GASNP--KGGGIE---NGTQ 115
             R           LY T EPC+MC +A+  A +RR+ + G+ +   + G ++   +  +
Sbjct: 120 YVRRHGNRGWAATTLYTTGEPCSMCMSALVWANVRRVVWAGSIDEIRRTGIVQIALSAHE 179

Query: 116 FYTLATCHHSPE-IYPGISEQRSRQIIQDFFKERR 149
               A   ++PE +  G+   R+  + Q+    RR
Sbjct: 180 VAAAARTFYTPELLLGGVLSDRTDLLFQE---ARR 211


>gi|329903444|ref|ZP_08273466.1| Diamino hydroxy phospho ribosyl amin opyrimidine deaminase
           [Oxalobacteraceae bacterium IMCC9480]
 gi|327548371|gb|EGF33053.1| Diamino hydroxy phospho ribosyl amin opyrimidine deaminase
           [Oxalobacteraceae bacterium IMCC9480]
          Length = 363

 Score = 89.2 bits (221), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 34/155 (21%), Positives = 53/155 (34%), Gaps = 18/155 (11%)

Query: 1   MKKGNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           +      M+ ALE A            VG V V +  ++     +        AHAEI A
Sbjct: 3   IANDQQGMALALEWAAKGMFITAPNPRVGCVVVRDGVVLGAGHTQAAGQ----AHAEIQA 58

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
           +       +   +    LYVTLEPC        CA AI  A + R+    ++P       
Sbjct: 59  LADAQARGNS--VTGATLYVTLEPCSHHGRTPPCADAIIRAGVVRVVSAIADPNPLVAGA 116

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
           G +    A       +   +    + ++   FF  
Sbjct: 117 GLERLRAAG----IAVTTEVLRDAALEMNIGFFSR 147


>gi|255261262|ref|ZP_05340604.1| riboflavin biosynthesis protein RibD [Thalassiobium sp. R2A62]
 gi|255103597|gb|EET46271.1| riboflavin biosynthesis protein RibD [Thalassiobium sp. R2A62]
          Length = 363

 Score = 89.2 bits (221), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 36/153 (23%), Positives = 53/153 (34%), Gaps = 21/153 (13%)

Query: 3   KGNVFMSCALEEAQNAALR-NEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
               +M+ ALE  +    R    P VG V V + +++ R             HAE     
Sbjct: 2   SDARWMALALELGRRGLGRVWPNPSVGCVIVKDGRVVGRGW----TQDGGRPHAETH--- 54

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
                 +       D+YVTLEPC        CA A+  A + R+   A +        G 
Sbjct: 55  --ALAAAGTAARGSDVYVTLEPCSHYGHTPPCAQALIDAGVSRVIVAAGDSDPRVSGRGY 112

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
                A       +  G+ E  +R  +  FFK 
Sbjct: 113 AMLRDAG----ICVDIGLCESEARNDLAGFFKR 141


>gi|56459161|ref|YP_154442.1| riboflavin-specific deaminase [Idiomarina loihiensis L2TR]
 gi|56178171|gb|AAV80893.1| Riboflavin-specific deaminase [Idiomarina loihiensis L2TR]
          Length = 141

 Score = 89.2 bits (221), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 34/148 (22%), Positives = 57/148 (38%), Gaps = 25/148 (16%)

Query: 5   NVFMSCALEEAQNAALRNEI--PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
             FM  AL  ++ A    E   PVG V V + ++IS+   +        +HAE+ A+   
Sbjct: 3   EKFMLEALNISKQALPHCEPNPPVGCVLVKDGEVISKGFTQAIGG----SHAEVEALNA- 57

Query: 63  CRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116
                   L  V  YVTLEPC        CA+ +  + I+ +     +P       G + 
Sbjct: 58  ----HSGDLSGVTAYVTLEPCSFVGRTAACASTLLASGIKHVIIAMLDPDIRNNGKGAEI 113

Query: 117 YTLATCHHSPEIYPGISEQRSRQIIQDF 144
            T        ++  G+      +++  F
Sbjct: 114 LTAGG----VKVEVGL----CAELVAQF 133


>gi|226357300|ref|YP_002787040.1| cytidine/deoxycytidylate deaminase [Deinococcus deserti VCD115]
 gi|226319290|gb|ACO47286.1| putative Cytidine/deoxycytidylate deaminase, zinc-binding region
           (CMP/dCMP deaminase, zinc-binding) [Deinococcus deserti
           VCD115]
          Length = 221

 Score = 89.2 bits (221), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 34/110 (30%), Positives = 48/110 (43%), Gaps = 13/110 (11%)

Query: 11  ALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNR----------NRELKDVTAHAEILAI 59
           AL EA  A L    P+GA  V     +++R  NR               D  AHAEI A+
Sbjct: 21  ALSEAWEAYLHGSYPIGACVVDREGHVLARGRNRLGEPRRVEAGVISGHD-LAHAEINAL 79

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109
                +   E      L  T++PC  CA AI+++ +R + Y A +P  G 
Sbjct: 80  LALTDMPRPECYSWTVL-TTVQPCPQCAGAIAMSAVRAVEYAAPDPWAGC 128


>gi|198282613|ref|YP_002218934.1| riboflavin biosynthesis protein RibD [Acidithiobacillus
           ferrooxidans ATCC 53993]
 gi|198247134|gb|ACH82727.1| riboflavin biosynthesis protein RibD [Acidithiobacillus
           ferrooxidans ATCC 53993]
          Length = 357

 Score = 89.2 bits (221), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 38/150 (25%), Positives = 54/150 (36%), Gaps = 21/150 (14%)

Query: 8   MSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           MS AL  A+      +  P VGAV V + ++I R  +          HAE+LA++     
Sbjct: 1   MSEALVLAEQGLYSAHPNPCVGAVLVKDGRVIGRGAHLQAGE----PHAEVLALKEAGAA 56

Query: 66  LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
                      YVTLEPC        CA A+  A I R+     +P       G +    
Sbjct: 57  ARGAT-----AYVTLEPCSHYGRTPPCADALIAAGIARVVIAMRDPNPLVAGRGVERLRA 111

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
           A          G  E  +  +   F +  R
Sbjct: 112 AG----VVAEEGCLEAAAEALNPGFLRRMR 137


>gi|307608893|emb|CBW98292.1| hypothetical protein LPW_01491 [Legionella pneumophila 130b]
          Length = 153

 Score = 89.2 bits (221), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 37/153 (24%), Positives = 64/153 (41%), Gaps = 21/153 (13%)

Query: 1   MKKGNV-FMSCALEEAQNAALRNEIPVGAVAVLNN-KIISRAGNRNRELKDVTAHAEILA 58
           M K    FM+  +E A    +    P GA+ V ++ +I+ ++ N      +   H E+  
Sbjct: 1   MDKYIYDFMAATIEVAVTNPMA---PYGAIIVYDDKEILLKSVNS--AHNNPLMHGELSV 55

Query: 59  IRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS----------NPKGG 108
           I           + ++ LY T EPC MCAAAI  A I ++ YG+S            + G
Sbjct: 56  IHRLFENGFDGDVSKLSLYTTAEPCPMCAAAIYWAMIPKVVYGSSISFLHELFGRQIQVG 115

Query: 109 GIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141
             +  ++     +CH    +  G+  +   Q+ 
Sbjct: 116 AEDILSKTPDFYSCH----VITGVMVEECNQLF 144


>gi|124023623|ref|YP_001017930.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase and
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Prochlorococcus marinus str. MIT 9303]
 gi|123963909|gb|ABM78665.1| putative Diaminohydroxyphosphoribosylaminopyrimidine deaminase and
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Prochlorococcus marinus str. MIT 9303]
          Length = 368

 Score = 89.2 bits (221), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 35/147 (23%), Positives = 51/147 (34%), Gaps = 22/147 (14%)

Query: 7   FMSCALEEAQNAALRNEI-P-VGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
           +M  AL+ A  A  R    P VGAV +    K++    +          HAE+ A+    
Sbjct: 14  WMRRALQLAALADGRTSPNPLVGAVVLDKAGKLVGEGFHACAGE----PHAEVGALAQAG 69

Query: 64  RILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFY 117
                E      L VTLEPC        C  A+  A +RR+     +P       G    
Sbjct: 70  -----EQASGGTLVVTLEPCCHQGRTPPCTQAVIAAGLRRVVVAMQDPDPRVAGAGITRL 124

Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDF 144
             A      E+   + E  +    + F
Sbjct: 125 RDAGL----EVITAVLEPEAAHQNRAF 147


>gi|32491211|ref|NP_871465.1| hypothetical protein WGLp462 [Wigglesworthia glossinidia
           endosymbiont of Glossina brevipalpis]
 gi|25166418|dbj|BAC24608.1| ribD [Wigglesworthia glossinidia endosymbiont of Glossina
           brevipalpis]
          Length = 384

 Score = 89.2 bits (221), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 36/154 (23%), Positives = 63/154 (40%), Gaps = 21/154 (13%)

Query: 2   KKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
           K+   +++ A   A+      +  P VG V VLN  I+    ++     D   HAEI A+
Sbjct: 4   KEDLTYLNRAFNLAELGKFTTHPNPNVGCVIVLNKSIVGEGYHK-IPGSD---HAEICAL 59

Query: 60  RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113
           ++  +           +YVTLEPC        CA A+  A+++ +   A +P       G
Sbjct: 60  KLAGK-----YAKGSTVYVTLEPCSHHGKTPSCAQALINAKVKEVIASAVDPNPLVSGKG 114

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
                    +   ++   I  ++S ++   FFK 
Sbjct: 115 FSMLK----NAGIKVKYNIMSEKSIKLNLGFFKR 144


>gi|264677184|ref|YP_003277090.1| riboflavin biosynthesis protein RibD [Comamonas testosteroni CNB-2]
 gi|262207696|gb|ACY31794.1| riboflavin biosynthesis protein RibD [Comamonas testosteroni CNB-2]
          Length = 369

 Score = 89.2 bits (221), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 38/156 (24%), Positives = 60/156 (38%), Gaps = 19/156 (12%)

Query: 1   MKKGNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNK-IISRAGNRNRELKDVTAHAEIL 57
           M     FM+ ALE+A  A         VG V V  ++ II +     ++      HAE++
Sbjct: 1   MTPSAHFMNKALEQAAQALFLSSPNPRVGCVIVDASERIIGQGF--TQQTGGP--HAEVM 56

Query: 58  AIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIE 111
           A+R      +         YVTLEPC+       C  A+  A I ++    ++P      
Sbjct: 57  ALRDAAAKGNDVR--GATAYVTLEPCSHHGRTGPCCDALIAAGIGKVVGALTDPNPQVAG 114

Query: 112 NGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
            G +    A      ++  G     SR++   FF  
Sbjct: 115 QGFERLRAAG----VDVEIGPGGAESRELNIGFFSR 146


>gi|218463058|ref|ZP_03503149.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase protein
           [Rhizobium etli Kim 5]
          Length = 412

 Score = 89.2 bits (221), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 28/141 (19%), Positives = 46/141 (32%), Gaps = 21/141 (14%)

Query: 4   GNVFMSCALEEAQN--AALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
              FM+ A+  ++           VG + V +  ++ +A            HAE  A+  
Sbjct: 7   DESFMAAAIRLSRRHLGRTATNPSVGCLIVKDGVVVGQA----VTALGGRPHAEPQALAE 62

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
                         +YVTLEPC        CA A+    + R+    ++P       G  
Sbjct: 63  AGEAA-----RGGTVYVTLEPCSHHGKTPPCAEALIAYGVARVVISVTDPDPRVSGRGIS 117

Query: 116 FYTLATCHHSPEIYPGISEQR 136
               A      E+  G+ E  
Sbjct: 118 MLRDAG----IEVDAGVLEAE 134


>gi|319957427|ref|YP_004168690.1| riboflavin biosynthesis protein ribd [Nitratifractor salsuginis DSM
           16511]
 gi|319419831|gb|ADV46941.1| riboflavin biosynthesis protein RibD [Nitratifractor salsuginis DSM
           16511]
          Length = 336

 Score = 88.8 bits (220), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 41/176 (23%), Positives = 67/176 (38%), Gaps = 42/176 (23%)

Query: 1   MK-KGNVFMSCALEEAQN--AALRNEIPVGAVAVLNNKIIS-RAGNRNRELKDVTAHAEI 56
           MK     +M  AL EA            VG   V   +I++  A ++  E      HAE+
Sbjct: 1   MKIDDRFYMQLALGEAWRYQGLTYPNPAVGCCVVKEGRILAVEAHHKAGES-----HAEL 55

Query: 57  LAIRMG----------------------CRILSQEILPEVDLYVTLEPC------TMCAA 88
            A+                          + + +E+   V LYVTLEPC        CA 
Sbjct: 56  WAMLAAYEALEGREAAVDSADADAVYDFLQTVPEELFRGVSLYVTLEPCAHHGRTPSCAW 115

Query: 89  AISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
           A+S   + R+    ++P  G    G +        H  E+  G+ E+ +R++++ F
Sbjct: 116 ALSRFPLHRVVVATADPIPGH-GGGLEILAD----HGIEVATGVCEEEARELLEPF 166


>gi|226304955|ref|YP_002764913.1| deaminase [Rhodococcus erythropolis PR4]
 gi|226184070|dbj|BAH32174.1| putative deaminase [Rhodococcus erythropolis PR4]
          Length = 121

 Score = 88.8 bits (220), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 29/105 (27%), Positives = 47/105 (44%), Gaps = 1/105 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           +S AL+ A+      E+P+GAV   +++++ RA  + R L     HA++ AI      L 
Sbjct: 8   LSLALDVAREGMELGEMPIGAVVFDDDRVLGRAYTQERALGRRVVHADLQAILQADEALG 67

Query: 68  QEILPE-VDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIE 111
                  + L V LEPC MC  A     + R+++       G   
Sbjct: 68  FTRASGELTLAVNLEPCLMCMGAAITLGVSRVWFAEYATGTGPAG 112


>gi|325478589|gb|EGC81701.1| riboflavin biosynthesis protein RibD [Anaerococcus prevotii
           ACS-065-V-Col13]
          Length = 357

 Score = 88.8 bits (220), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 35/157 (22%), Positives = 58/157 (36%), Gaps = 32/157 (20%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56
           M   N+ M    + A       ++   P VGAV   + KII+R  +++        HAEI
Sbjct: 1   MNYDNL-MRECFDLALKG--SGKVLTNPMVGAVLYKDGKIIARGYHKSYYDD----HAEI 53

Query: 57  LAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASN--PKGG 108
                       E      L V LEPC        C   +   +++R+    ++  PK  
Sbjct: 54  DCFNNL-----NESAEGATLVVNLEPCSHFGKHPPCVDEVIRRKVKRVVISNTDTNPKVD 108

Query: 109 GIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
           GI    +           E+  G+ E+   ++ + FF
Sbjct: 109 GISKLKEA--------GIEVITGVLEEEGEKLNEKFF 137


>gi|239932948|ref|ZP_04689901.1| hypothetical protein SghaA1_32303 [Streptomyces ghanaensis ATCC
           14672]
 gi|291441299|ref|ZP_06580689.1| conserved hypothetical protein [Streptomyces ghanaensis ATCC 14672]
 gi|291344194|gb|EFE71150.1| conserved hypothetical protein [Streptomyces ghanaensis ATCC 14672]
          Length = 161

 Score = 88.8 bits (220), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 32/151 (21%), Positives = 56/151 (37%), Gaps = 11/151 (7%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +   +E A  A    + P G+V V  +  +++   NR     D T H E    R     L
Sbjct: 11  LRRCVELATEALESGDEPFGSVLVGGDGTVLAEDHNRV-ASGDHTRHPEFELARWSAAHL 69

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA-TCHHS 125
           + +      +Y + E C MCAAA +   + R+ Y AS+ +     +              
Sbjct: 70  TPDERAAATVYTSGEHCPMCAAAHAWVGLGRIVYVASSEQLASWLSELGVPAPPVRTLPV 129

Query: 126 PEIYPGI--------SEQRSRQIIQDFFKER 148
            E+ PG+              ++ + F + R
Sbjct: 130 AEVAPGVVVDGPVPELVGEVEELHRRFHRAR 160


>gi|54307992|ref|YP_129012.1| putative pyrimidine deaminase/pyrimidine reductase [Photobacterium
           profundum SS9]
 gi|46912418|emb|CAG19210.1| Putative pyrimidine deaminase/pyrimidine reductase [Photobacterium
           profundum SS9]
          Length = 371

 Score = 88.8 bits (220), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 33/152 (21%), Positives = 53/152 (34%), Gaps = 21/152 (13%)

Query: 4   GNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
            +  M  A+E A+         P VG +      I+    +   +      HAE+ A+R 
Sbjct: 6   DHSMMLRAIELAKRGRFTTAPNPNVGCIIAQGATIVGEGFH--YQAGQP--HAEVFALRA 61

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
                  E       YVTLEPC        CA A+  A + R+     +P       G +
Sbjct: 62  AG-----EQAKGATAYVTLEPCSHFGRTPPCAQALINANVSRVVCAMVDPNPKVGGRGIE 116

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
              +A      E+  G+    ++ +   F K 
Sbjct: 117 MLKIAG----IEVQTGLLAADAQALNFGFIKR 144


>gi|222151702|ref|YP_002560858.1| hypothetical protein MCCL_1455 [Macrococcus caseolyticus JCSC5402]
 gi|222120827|dbj|BAH18162.1| conserved hypothetical protein [Macrococcus caseolyticus JCSC5402]
          Length = 341

 Score = 88.8 bits (220), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 31/127 (24%), Positives = 48/127 (37%), Gaps = 27/127 (21%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC-- 83
           VG V V +++I+    +         AHAE+ AI M              LY TLEPC  
Sbjct: 23  VGCVIVKDDRIVGIGAHLTEGE----AHAEVNAIHMAGSHAQ-----GATLYCTLEPCSH 73

Query: 84  ----TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139
                 C   I  A I ++ Y AS+     + +G ++    +          + +   R 
Sbjct: 74  HGKTPPCTEKIVAAGISKVVYAASDVT---LSSGVKYMRSESIE--------VEKVECRA 122

Query: 140 IIQDFFK 146
           I  DF+ 
Sbjct: 123 I-DDFYA 128


>gi|86145701|ref|ZP_01064030.1| putative riboflavin deaminase [Vibrio sp. MED222]
 gi|85836400|gb|EAQ54529.1| putative riboflavin deaminase [Vibrio sp. MED222]
          Length = 145

 Score = 88.8 bits (220), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 33/141 (23%), Positives = 57/141 (40%), Gaps = 17/141 (12%)

Query: 4   GNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
              +M  ALE ++ A    +   PVG V V N+K++S    +         HAE+ A+  
Sbjct: 2   NQQYMLQALEASRQALPDCQPNPPVGCVLVKNDKVVSVGYTQKVGGN----HAEVEAL-N 56

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
           G    +   +  V  YVTLEPC        CA+ +  A ++ +     +P       G  
Sbjct: 57  GYDCETDGEMEGVTAYVTLEPCSFVGRTPACASTLVKAGVKHVVVAMLDPDPRNNGRGVA 116

Query: 116 FYTLATCHHSPEIYPGISEQR 136
                   H  ++  G+ +++
Sbjct: 117 ILES----HGVKVDVGLCQEQ 133


>gi|319786233|ref|YP_004145708.1| riboflavin biosynthesis protein RibD [Pseudoxanthomonas suwonensis
           11-1]
 gi|317464745|gb|ADV26477.1| riboflavin biosynthesis protein RibD [Pseudoxanthomonas suwonensis
           11-1]
          Length = 365

 Score = 88.8 bits (220), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 33/149 (22%), Positives = 52/149 (34%), Gaps = 21/149 (14%)

Query: 4   GNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
            +  M+ AL+ A       R    VG V   +  ++    +          HAE+ A+R 
Sbjct: 9   DHACMARALQLAARGLYTARPNPVVGCVVAKDGAVVGEGWHPRAGE----PHAEVFALRE 64

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
                  E       YVTLEPC        CA A+  A + R+     +P       G  
Sbjct: 65  AG-----ERARGATAYVTLEPCAHHGRTPPCAEALVQAGVARVVAAMRDPFPRVDGAGFA 119

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDF 144
               A       +  G+ E ++R + + F
Sbjct: 120 RLQAAG----IAVAAGLMEGQARDLNRGF 144


>gi|260575298|ref|ZP_05843298.1| riboflavin biosynthesis protein RibD [Rhodobacter sp. SW2]
 gi|259022558|gb|EEW25854.1| riboflavin biosynthesis protein RibD [Rhodobacter sp. SW2]
          Length = 357

 Score = 88.8 bits (220), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 32/148 (21%), Positives = 49/148 (33%), Gaps = 21/148 (14%)

Query: 8   MSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M+ AL  A     R      VG V V   +++ R   +         HAE++A+     +
Sbjct: 1   MAHALALAARGLGRAWPNPAVGCVIVAGGRVVGRGHTQPGGR----PHAEVMALHQAGAL 56

Query: 66  LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
                      YVTLEPC        CA A+  A + R+    ++P       G      
Sbjct: 57  A-----RGATAYVTLEPCAHHGHTPPCAEALIAAGVARVVTALTDPDPRVSGKGHALLRA 111

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKE 147
           A       +  G+    +      F K 
Sbjct: 112 AG----IAVTEGVLPAEATAANAGFLKR 135


>gi|237880781|gb|ACR33039.1| cytosine/adenine deaminase [Actinoplanes garbadinensis]
          Length = 161

 Score = 88.8 bits (220), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 27/103 (26%), Positives = 44/103 (42%), Gaps = 2/103 (1%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +     +   ++ A+ A    + P G+V V  + K++    NR R   D T H E    R
Sbjct: 5   ETDLAHLRRCVDLAREALDDGDEPFGSVLVSADGKVLFEDRNRVR-HGDATQHPEFAISR 63

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
                L+        +Y + E C MC+A+    R+ R+ Y AS
Sbjct: 64  WAAEHLTPRERASATVYTSGEHCPMCSASHGWVRLGRIVYAAS 106


>gi|260551098|ref|ZP_05825302.1| riboflavin biosynthesis protein RibD [Acinetobacter sp. RUH2624]
 gi|260405865|gb|EEW99353.1| riboflavin biosynthesis protein RibD [Acinetobacter sp. RUH2624]
          Length = 113

 Score = 88.8 bits (220), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 29/105 (27%), Positives = 45/105 (42%), Gaps = 17/105 (16%)

Query: 1  MKKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
          +K+   +M  A+E A+         P VG V V +N++I    +     K    HAE+ A
Sbjct: 4  LKQDQYWMQQAIELAKRGLYSTKPNPNVGCVIVKDNQVIGEGFH----PKAGQPHAEVFA 59

Query: 59 IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRR 97
          +R                YVTLEPC        CA A+  A++++
Sbjct: 60 LRQAGEQAQ-----GATAYVTLEPCAHYGRTPPCAEALVKAQVKK 99


>gi|315179335|gb|ADT86249.1| riboflavin biosynthesis protein RibD [Vibrio furnissii NCTC 11218]
          Length = 369

 Score = 88.8 bits (220), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 35/152 (23%), Positives = 49/152 (32%), Gaps = 21/152 (13%)

Query: 4   GNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
               MS A++ AQ         P VG V      I+    +          HAE+ A+RM
Sbjct: 8   DYQMMSRAIKLAQRGRFTTAPNPNVGCVITQGESIVGEGFHFRAGE----PHAEVHALRM 63

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
                          YVTLEPC        CA  +  A + R+     +P       G  
Sbjct: 64  AGEQS-----VGATAYVTLEPCSHYGRTPPCAEGLIKAGVARVICAMQDPNPQVAGRGID 118

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
               A      E+  G+ E  +  +   F K 
Sbjct: 119 MLREAG----IEVQVGLLEADALALNPAFIKR 146


>gi|167538365|ref|XP_001750847.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163770668|gb|EDQ84351.1| predicted protein [Monosiga brevicollis MX1]
          Length = 203

 Score = 88.8 bits (220), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 31/107 (28%), Positives = 45/107 (42%), Gaps = 6/107 (5%)

Query: 3   KGNVFMSCALEEAQNAALRN-EIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIR 60
                M+ A++ ++   L     P GAV    +++II+   NR        AHAE +A  
Sbjct: 43  DDESKMALAIDLSRRNVLHKTGGPFGAVVFGPDHRIIAVGVNRVVPQVSSLAHAENMAYM 102

Query: 61  MGCRILSQEILPE----VDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
           +  + L    L E    V L  + +PC  C  A   A I RL  GA 
Sbjct: 103 LAQQHLQTYRLNEKNAPVTLVSSAQPCCQCYGATIWAGIDRLVIGAR 149


>gi|91763228|ref|ZP_01265192.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Candidatus
           Pelagibacter ubique HTCC1002]
 gi|91717641|gb|EAS84292.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Candidatus
           Pelagibacter ubique HTCC1002]
          Length = 366

 Score = 88.8 bits (220), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 37/110 (33%), Positives = 48/110 (43%), Gaps = 17/110 (15%)

Query: 3   KGNVFMSCALEEAQ-NAALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           K  +FM  AL  A+    L    P VG V V NNKI+S      +     T HAE  AI+
Sbjct: 11  KDKIFMELALNLAKARHGLTGINPSVGCVIVKNNKILSIG----QTGFKGTPHAEFNAIK 66

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASN 104
                 S E +    +YVTLEPC        C   I   +I+ + YG  +
Sbjct: 67  N-----SHENIEGSKMYVTLEPCSHYGKTPPCTNIIIKNKIKEVVYGVED 111


>gi|157369315|ref|YP_001477304.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Serratia proteamaculans 568]
 gi|157321079|gb|ABV40176.1| riboflavin biosynthesis protein RibD [Serratia proteamaculans 568]
          Length = 369

 Score = 88.8 bits (220), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 36/157 (22%), Positives = 54/157 (34%), Gaps = 21/157 (13%)

Query: 1   MKKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           M     +M+ A E A+         P VG V V + +I+    +          HAE+ A
Sbjct: 1   MHNDEFYMARAFELARLGRFTTAPNPNVGCVIVRDGEIVGEGYHLRAGE----PHAEVHA 56

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
           +RM               YVTLEPC        CA A+  A + R+     +P       
Sbjct: 57  LRMAGEKA-----RGATAYVTLEPCSHHGRTPPCADALVAAGVARVVAAMQDPNPEVAGR 111

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
           G      A      ++  G+    +  +   F K  R
Sbjct: 112 GLYKLQQAGL----DVRHGLMLAEAESVNLGFLKRMR 144


>gi|89070868|ref|ZP_01158107.1| riboflavin biosynthesis protein RibD [Oceanicola granulosus
           HTCC2516]
 gi|89043556|gb|EAR49766.1| riboflavin biosynthesis protein RibD [Oceanicola granulosus
           HTCC2516]
          Length = 362

 Score = 88.8 bits (220), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 35/151 (23%), Positives = 55/151 (36%), Gaps = 23/151 (15%)

Query: 2   KKGNVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
           +    FM+ AL   +    R      VG V V + +I++RA    R       HAE+ A+
Sbjct: 3   EADGRFMALALGLGRQGLGRTWPNPSVGCVLVRDGRILARA----RTADGGRPHAEMRAL 58

Query: 60  RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113
                            YVTLEPC        CA+ ++ A + R+  G ++        G
Sbjct: 59  AAA-------DPRGATAYVTLEPCAHVGETPACASELARAGVARVVIGCADADARTAGQG 111

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
                 A       +  G+ E  +R +   F
Sbjct: 112 VAILRAAG----VAVTTGVREAEARALHAGF 138


>gi|299115418|emb|CBN75583.1| riboflavin biosynthesis protein [Ectocarpus siliculosus]
          Length = 541

 Score = 88.8 bits (220), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 31/153 (20%), Positives = 49/153 (32%), Gaps = 22/153 (14%)

Query: 1   MKKGNVFMSCALEEAQNAA--LRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEIL 57
           ++     M  ALE A       R    VG V +     ++    +          HAE+ 
Sbjct: 67  LEVDGAHMRRALELAAKGLGHTRPNPAVGCVILDKEGSVVGEGFHPRAGE----PHAEVW 122

Query: 58  AIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIE 111
           AIR        E       YV+LEPC        C  A+    + R+  G  +P      
Sbjct: 123 AIRQAG-----ERARGGTAYVSLEPCNHFGRTPPCTTALLECGVARVVAGMVDPDPRTAG 177

Query: 112 NGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
           +G +    A      ++  G+       +   F
Sbjct: 178 SGLRRLADAG----IDVSVGVEGAACHALNSAF 206


>gi|116334232|ref|YP_795759.1| pyrimidine reductase, riboflavin biosynthesis [Lactobacillus brevis
           ATCC 367]
 gi|116099579|gb|ABJ64728.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Lactobacillus brevis ATCC 367]
          Length = 356

 Score = 88.4 bits (219), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 36/151 (23%), Positives = 52/151 (34%), Gaps = 35/151 (23%)

Query: 7   FMSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           FM  A+  A+  +      P VGAV V + KI+S   +          HAEI A+    +
Sbjct: 6   FMQQAVIAARRGSGHTWTNPLVGAVFVKHGKILSVGYHHRYGQ----RHAEIDAL---AQ 58

Query: 65  ILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
           +   +      LYVTLEPC        CA  +    + R+  G  +P       G     
Sbjct: 59  LQRPQQAQGATLYVTLEPCSHFGKTPPCADRLIEVGVGRVVIGQRDPNPLVAGRGISKLR 118

Query: 119 LATC--------------------HHSPEIY 129
            A                      HH P++ 
Sbjct: 119 AAGIPVSVLDSTTALNPAYNFYYQHHRPQVT 149


>gi|302036973|ref|YP_003797295.1| bifunctional daminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Candidatus Nitrospira defluvii]
 gi|300605037|emb|CBK41370.1| fused Diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Candidatus Nitrospira defluvii]
          Length = 373

 Score = 88.4 bits (219), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 35/154 (22%), Positives = 56/154 (36%), Gaps = 26/154 (16%)

Query: 2   KKGNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57
            +   +M+ AL  A     R      P VGA+ V   +I+ +  +R         HAE++
Sbjct: 3   SRDREYMTLALRLAAKG--RGSTSPNPMVGALVVTRGRIVGQGSHRKAGG----PHAEVI 56

Query: 58  AIRMGCRILSQEILPEVDLYVTLEPC-------TMCAAAISLARIRRLYYGASNPKGGGI 110
           A+                LYVTLEPC         C   +  + +RR+     +P     
Sbjct: 57  ALSQAG-----SRAKGGTLYVTLEPCSHLKKRTPPCVPLVMASGVRRVVVAMVDPNPQVK 111

Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
            NG     L       ++  G  E  + Q+ Q +
Sbjct: 112 GNG--VAQLTRAGIRVDV--GCCEAEATQLNQAY 141


>gi|260907588|ref|ZP_05915910.1| cytidine/deoxycytidylate deaminase family protein [Brevibacterium
           linens BL2]
          Length = 264

 Score = 88.4 bits (219), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 33/154 (21%), Positives = 56/154 (36%), Gaps = 23/154 (14%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRE-LKDVTAHAEILAI 59
                 +   ++ A +A  R   P  ++ V  +  +I+ AGN +     D T HAE+ A 
Sbjct: 102 NTDLALLRQTIDLATDARNRGRHPFASMVVSADGTVIASAGNNSMPPEGDPTQHAELSAA 161

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
               R++  E LP   LY + EPC MC  AI    I R+ Y  S  +        +    
Sbjct: 162 AEAARMVPAEELPTATLYTSAEPCVMCTGAIYWTGIGRIVYALSESR------LLELTGD 215

Query: 120 ATCHH---------------SPEIYPGISEQRSR 138
              +                + ++   + E  + 
Sbjct: 216 DPENPTFDLPCREVIARGQRNIDVLGPLLEDEAA 249


>gi|311103895|ref|YP_003976748.1| riboflavin biosynthesis protein RibD [Achromobacter xylosoxidans
           A8]
 gi|310758584|gb|ADP14033.1| riboflavin biosynthesis protein RibD [Achromobacter xylosoxidans
           A8]
          Length = 383

 Score = 88.4 bits (219), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 36/154 (23%), Positives = 52/154 (33%), Gaps = 18/154 (11%)

Query: 2   KKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
                +M  AL  AQ         P VG V V + +++     +         HAE+ A+
Sbjct: 7   NDDIFWMRRALALAQTVMYSTAPNPRVGCVIVRDGRVLGEGATQPPGG----PHAEVCAL 62

Query: 60  RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113
           R        E +    LYVTLEPC        C  A+  AR  R+     +P       G
Sbjct: 63  RDVQAR--GESVEGATLYVTLEPCSHFGRTPPCVDAVLAARPARVVVAIGDPNPLVNGQG 120

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
                LA      E+  G+    +  +   F   
Sbjct: 121 LARLRLAG----IEVTTGVCGAEALAVNAGFISR 150


>gi|119502840|ref|ZP_01624925.1| Riboflavin biosynthesis protein RibD [marine gamma proteobacterium
           HTCC2080]
 gi|119461186|gb|EAW42276.1| Riboflavin biosynthesis protein RibD [marine gamma proteobacterium
           HTCC2080]
          Length = 359

 Score = 88.4 bits (219), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 38/145 (26%), Positives = 53/145 (36%), Gaps = 22/145 (15%)

Query: 8   MSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M  AL EA+         P VG V V +NKI+ +   +        AHAEI+A+   C  
Sbjct: 1   MEQALAEARKGRFWATPNPHVGCVIVSDNKILGKGFTQPVGG----AHAEIMAL-GACAS 55

Query: 66  LSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
                      YVTLEPC        C  A+  A I R+     +P       G      
Sbjct: 56  PQ-----GATAYVTLEPCAHQGRTGPCVEALISAGIGRVVGALEDPNPSVSGKGYDRLRA 110

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDF 144
           A       +  G+  + +R  +  F
Sbjct: 111 AG----IAVTQGVYSEAARVELAGF 131


>gi|90578371|ref|ZP_01234182.1| putative riboflavin deaminase [Vibrio angustum S14]
 gi|90441457|gb|EAS66637.1| putative riboflavin deaminase [Vibrio angustum S14]
          Length = 146

 Score = 88.4 bits (219), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 34/142 (23%), Positives = 50/142 (35%), Gaps = 21/142 (14%)

Query: 3   KGNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +   FM  AL  +  +  A R   PVG V V   +I+S    +         HAE +A+ 
Sbjct: 6   QEQAFMIRALLLSHQSLPACRPNPPVGCVLVKEGEIVSEGFTQPPGQH----HAEAMAL- 60

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
                       +V  YVTLEPC        CA  +    I+++     +P       G 
Sbjct: 61  ----ANYDGSFTDVTAYVTLEPCSFVGRTPSCAHTLVELGIKKVVVATLDPDSRNSGKGI 116

Query: 115 QFYTLATCHHSPEIYPGISEQR 136
                A      E+  G+ E  
Sbjct: 117 AVLKEAG----IEVEVGLCENE 134


>gi|227499806|ref|ZP_03929901.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Anaerococcus
           tetradius ATCC 35098]
 gi|227218110|gb|EEI83378.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Anaerococcus
           tetradius ATCC 35098]
          Length = 357

 Score = 88.4 bits (219), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 37/157 (23%), Positives = 61/157 (38%), Gaps = 32/157 (20%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56
           M   N+ M      A+    R ++   P VGA+   + ++I R  +++        HAEI
Sbjct: 1   MNYDNL-MRECFSLARKG--RGKVLTNPMVGAIVYKDGEVIGRGYHKSFYDD----HAEI 53

Query: 57  LAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGA--SNPKGG 108
                 C    +       L V LEPC        C   +   +I+R+      +NPK  
Sbjct: 54  D-----CFKNLKGSAEGATLIVNLEPCSHFGKHPPCVDEVIRRKIKRVVISNIDTNPKVD 108

Query: 109 GIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
           GI        L  C    E+  G+ E+  +++ + FF
Sbjct: 109 GIS------KLKAC--GIEVISGVLEEEGKKLNEKFF 137


>gi|170721237|ref|YP_001748925.1| CMP/dCMP deaminase zinc-binding [Pseudomonas putida W619]
 gi|169759240|gb|ACA72556.1| CMP/dCMP deaminase zinc-binding [Pseudomonas putida W619]
          Length = 169

 Score = 88.4 bits (219), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 35/149 (23%), Positives = 59/149 (39%), Gaps = 11/149 (7%)

Query: 9   SCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRE-LKDVTAHAEILAIRMGCRIL 66
             ++  A+ +  R   P  A+      ++I+ AGN +     D T HAE++A  +  + L
Sbjct: 21  RQSMRLAEQSKARGRHPFAAIVADAEGRVIASAGNNSMPPEGDPTQHAELVAAALAAKAL 80

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIE---------NGTQFY 117
             E L    LY + EPC MCA A+    I R+ Y  S     G+          +     
Sbjct: 81  PPEALANCTLYTSAEPCCMCAGAVYWTGIGRVVYALSEHTLLGLTGDHPENPTFSLPCRE 140

Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDFFK 146
             A       ++  + E  +    + F+K
Sbjct: 141 VFARGQRDVIVHGPLLEDEAAAAHKGFWK 169


>gi|254796854|ref|YP_003081691.1| riboflavin biosynthesis protein RibD [Neorickettsia risticii str.
           Illinois]
 gi|254590091|gb|ACT69453.1| riboflavin biosynthesis protein RibD [Neorickettsia risticii str.
           Illinois]
          Length = 359

 Score = 88.4 bits (219), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 26/138 (18%), Positives = 51/138 (36%), Gaps = 21/138 (15%)

Query: 8   MSCALEEAQ--NAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M  A+  +        +   VG + V +++++ +         + + HAE +A+++    
Sbjct: 1   MEAAVNASLFGQGFTADNPSVGCIIVKDDEVVGKG----VTGINGSPHAEAVALKVAGIK 56

Query: 66  LSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
                    DLY TLEPC        C   I  + I+ ++ G  +P       G Q    
Sbjct: 57  A-----RGADLYTTLEPCAHHGRTAPCTDLIIGSGIKNVFIGTRDPDTRVNGKGIQKLRE 111

Query: 120 ATCHHSPEIYPGISEQRS 137
           +       +  GI ++  
Sbjct: 112 SG----IVVTTGILKREC 125


>gi|320449997|ref|YP_004202093.1| riboflavin biosynthesis protein RibD [Thermus scotoductus SA-01]
 gi|320150166|gb|ADW21544.1| riboflavin biosynthesis protein RibD [Thermus scotoductus SA-01]
          Length = 383

 Score = 88.4 bits (219), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 36/151 (23%), Positives = 57/151 (37%), Gaps = 24/151 (15%)

Query: 4   GNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
              F+  AL+ A+ A      P   VGAV V   +++    +         AHAE+ A+R
Sbjct: 11  DERFLRRALQLAERARGHT-HPNPLVGAVLVREGRVVGEGYHPRAGE----AHAEVYALR 65

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
                   E      LYV+LEPC        C+ A+  A + R+   A +P         
Sbjct: 66  QAG-----EEAQGATLYVSLEPCNHFGRTPPCSLALLQAGVARVVAAARDPNPLAQGGLE 120

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
           +           E+  G+ E  ++   + FF
Sbjct: 121 RLRAG-----GVEVEAGLLEAEAQGQNEVFF 146


>gi|269839638|ref|YP_003324330.1| riboflavin biosynthesis protein RibD [Thermobaculum terrenum ATCC
           BAA-798]
 gi|269791368|gb|ACZ43508.1| riboflavin biosynthesis protein RibD [Thermobaculum terrenum ATCC
           BAA-798]
          Length = 364

 Score = 88.4 bits (219), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 42/150 (28%), Positives = 63/150 (42%), Gaps = 21/150 (14%)

Query: 8   MSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M  ALE A++A  R      VGAV V +  +I +   +         HAE++A+      
Sbjct: 1   MRRALELAESALGRTWPNPAVGAVVVRDGLVIGKGATQPPGG----PHAEVVAL-----A 51

Query: 66  LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
            + E      LYVTLEPC        C  AI  A +R ++    +P       G      
Sbjct: 52  EAGEAARGAILYVTLEPCSHWGRTPPCTEAIIRAGVREVHAATLDPNPKVHGRGVAQLRE 111

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
           A      E++ G+ E+ + +I + FFK  R
Sbjct: 112 AG----IEVHLGLCEREATRINEGFFKRVR 137


>gi|172058721|ref|YP_001815181.1| riboflavin biosynthesis protein RibD [Exiguobacterium sibiricum
           255-15]
 gi|171991242|gb|ACB62164.1| riboflavin biosynthesis protein RibD [Exiguobacterium sibiricum
           255-15]
          Length = 348

 Score = 88.4 bits (219), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 33/149 (22%), Positives = 52/149 (34%), Gaps = 21/149 (14%)

Query: 8   MSCALEEAQN--AALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M  A++ A+           VG V   + K+     +R         HAE+ A+ M    
Sbjct: 5   MHQAMQLARMLDGQTSPNPSVGCVITKHGKVFGFGAHRFAGG----PHAEVEALNMAGEA 60

Query: 66  LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
                    DLYVTLEPC        C  AI  A I+R++    +        G +    
Sbjct: 61  A-----RGADLYVTLEPCNHHGKTPPCTEAILAAGIKRVFVATEDRHAIVAGQGIKRLRD 115

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKER 148
           A       +  G+ E  + +    F++  
Sbjct: 116 AGL----TVEVGLLEDEAVRFYTPFWQSL 140


>gi|254511482|ref|ZP_05123549.1| riboflavin biosynthesis protein RibD [Rhodobacteraceae bacterium
           KLH11]
 gi|221535193|gb|EEE38181.1| riboflavin biosynthesis protein RibD [Rhodobacteraceae bacterium
           KLH11]
          Length = 358

 Score = 88.4 bits (219), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 30/146 (20%), Positives = 47/146 (32%), Gaps = 21/146 (14%)

Query: 8   MSCALEEAQNAALR--NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M+ AL   +           VG V V + +I+ R   +         HAE  A+      
Sbjct: 1   MALALSLGRRGQGNCWPNPAVGCVIVRDGRIVGRGWTQPGGR----PHAEPQALAQAGEA 56

Query: 66  LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
                      YV+LEPC        CA  +  A + R+     +        G      
Sbjct: 57  A-----KGATAYVSLEPCSHYGKTPPCAQVLIGAGVARVVSAIEDSDPRVAGQGFDMLRA 111

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFF 145
           A      E+  G+  +++ Q    FF
Sbjct: 112 AG----IEVTSGVLAEQAAQDHAGFF 133


>gi|114331695|ref|YP_747917.1| CMP/dCMP deaminase, zinc-binding [Nitrosomonas eutropha C91]
 gi|114308709|gb|ABI59952.1| CMP/dCMP deaminase, zinc-binding protein [Nitrosomonas eutropha
           C91]
          Length = 165

 Score = 88.4 bits (219), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 25/103 (24%), Positives = 43/103 (41%), Gaps = 2/103 (1%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIR 60
           +    F+   +  A+ A    + P G+V V     ++  A N+     D T H E    R
Sbjct: 5   EADLHFLRRCIALAEEALEAGDEPFGSVLVSGEGVVLLEARNQV-SSGDQTRHPEFEISR 63

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
                ++ E   +  +Y + E C MC+AA     + R+ Y +S
Sbjct: 64  WAATHMTPEERNKATVYTSSEHCPMCSAAHGWVGLGRIVYASS 106


>gi|157374412|ref|YP_001473012.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Shewanella
           sediminis HAW-EB3]
 gi|157316786|gb|ABV35884.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase [Shewanella
           sediminis HAW-EB3]
          Length = 374

 Score = 88.4 bits (219), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 34/153 (22%), Positives = 54/153 (35%), Gaps = 21/153 (13%)

Query: 3   KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +    MS A++ A+         P VG+V     ++I    +          HAE+ A+ 
Sbjct: 5   EDIEMMSRAIKLARKGLYTTRPNPCVGSVVTKAGQVIGEGFHIRAGG----PHAEVYALA 60

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           M       +       YVTLEPC        CA A+  A + R+     +P       G 
Sbjct: 61  MA-----SDNAKGATAYVTLEPCSHHGRTPPCAEALIKAGVARVVVAIEDPNPQVSGRGI 115

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
           +  T A      ++  G+    +  I   F K 
Sbjct: 116 KMLTDAG----IQVDVGLLNVEAGDINPGFMKR 144


>gi|327439885|dbj|BAK16250.1| cytosine/adenosine deaminase [Solibacillus silvestris StLB046]
          Length = 160

 Score = 88.4 bits (219), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 30/156 (19%), Positives = 60/156 (38%), Gaps = 12/156 (7%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
               +   +E A+ A  + + P G+V V  + +++    N      D T H E    R  
Sbjct: 6   DLKHLQRCVELAKIALEKGDEPFGSVLVSADGEVLFEDHNHV-AGGDHTQHPEFAIARWA 64

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNP-------KGGGIENGTQ 115
              +  E   +  +Y + E C MCAAA     + R+ Y +S+        + G   +  +
Sbjct: 65  ANNMKPEERIKATVYTSGEHCPMCAAAHGWVGLGRIVYASSSKQLVEWLAELGQAPSRVR 124

Query: 116 FYTLATCHHSPEIYPGI--SEQRSRQIIQDFFKERR 149
             ++    +   +   +    +   Q+ + F  E+R
Sbjct: 125 NLSIQEVINDISVDGPVPELAEEVHQLHRQF-HEKR 159


>gi|116072381|ref|ZP_01469648.1| Riboflavin biosynthesis protein RibD [Synechococcus sp. BL107]
 gi|116064903|gb|EAU70662.1| Riboflavin biosynthesis protein RibD [Synechococcus sp. BL107]
          Length = 354

 Score = 88.4 bits (219), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 32/154 (20%), Positives = 53/154 (34%), Gaps = 22/154 (14%)

Query: 5   NVFMSCALEEAQNAALRNEI-P-VGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           + +M  AL  A  A       P VGAV +  + +++    +          HAE+ A+  
Sbjct: 3   DAWMRRALALAGLADGHTSPNPLVGAVVLDRHGRLVGEGFHARAGE----PHAEVGALAQ 58

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
                  +      L VTLEPC        C+ A+  A I R+     +P       G  
Sbjct: 59  AG-----DRAKGGTLVVTLEPCCHHGRTPPCSEAVLRAGIARVVIALEDPDPRVDGGGMA 113

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
               A      ++  G+ +  +    + F    R
Sbjct: 114 QLRAAGL----DVISGVLQAEAAFQNRAFLHRVR 143


>gi|238006290|gb|ACR34180.1| unknown [Zea mays]
          Length = 130

 Score = 88.4 bits (219), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 29/113 (25%), Positives = 47/113 (41%), Gaps = 21/113 (18%)

Query: 56  ILAIRMGCRILSQ---------EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPK 106
           + AI +  R             E     DLYVT EPC MCA A+S+  IR +Y+G +N K
Sbjct: 1   MEAIDVLLREWQSMGLDQPQVAEKFAGCDLYVTCEPCIMCATALSIIGIREVYFGCANDK 60

Query: 107 GGGIENGTQFYT------------LATCHHSPEIYPGISEQRSRQIIQDFFKE 147
            GG  +    +              A+     +   GI  + +  + + F+++
Sbjct: 61  FGGCGSIMSLHNGAASSSDELSGSQASTPKGFKCTGGIMAEEAVALFRCFYEQ 113


>gi|229589688|ref|YP_002871807.1| putative riboflavin biosynthesis deaminase [Pseudomonas fluorescens
           SBW25]
 gi|229361554|emb|CAY48431.1| putative riboflavin biosynthesis deaminase [Pseudomonas fluorescens
           SBW25]
          Length = 156

 Score = 88.4 bits (219), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 34/146 (23%), Positives = 56/146 (38%), Gaps = 21/146 (14%)

Query: 7   FMSCALEEAQNAALR--NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           FM  AL + + A        PVG V V +N +IS+   +         HAE +A+     
Sbjct: 10  FMQLALAQGRLALPECLPNPPVGCVLVQDNMVISQGYTQAPGFH----HAEAMALSRLTN 65

Query: 65  ILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
                    V  +VTLEPC        CA A+  + +  ++ G  +P       G +   
Sbjct: 66  EC-----SAVTAFVTLEPCSFHGRTPSCALALINSGVETVFVGLLDPDPRNSGAGIRMLR 120

Query: 119 LATCHHSPEIYPGISEQRSRQIIQDF 144
            A       +  G+  + + + + DF
Sbjct: 121 DAG----ITVIVGLLAEETAEDLADF 142


>gi|116617932|ref|YP_818303.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase /
           diaminohydroxyphosphoribosylaminopyrimidine deaminase
           [Leuconostoc mesenteroides subsp. mesenteroides ATCC
           8293]
 gi|116096779|gb|ABJ61930.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase /
           diaminohydroxyphosphoribosylaminopyrimidine deaminase
           [Leuconostoc mesenteroides subsp. mesenteroides ATCC
           8293]
          Length = 344

 Score = 88.0 bits (218), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 36/129 (27%), Positives = 53/129 (41%), Gaps = 16/129 (12%)

Query: 3   KGNVFMSCALEEAQNA--ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
               +M  A +EA  A      E P VGAV V + ++I+   +         AHAEI A 
Sbjct: 2   NDLTWMKLAADEAIRAMPYQTFENPRVGAVIVKDGQVITTGYHEKFGE----AHAEINAF 57

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENG 113
               R+ ++       LYVTLEPC+       CA  I    ++R+  G+ +P       G
Sbjct: 58  N---RVKNKTEFLGATLYVTLEPCSTQGKVGSCAVQIQNWGLKRVVVGSIDPNPSTNGKG 114

Query: 114 TQFYTLATC 122
            +    A  
Sbjct: 115 IKMLRSAGI 123


>gi|86357148|ref|YP_469040.1| 5-amino-6-(5-phosphoribosylamino)uracil
           reductase/diaminohydroxyphosphoribosylaminopyrimidinedea
           minase protein [Rhizobium etli CFN 42]
 gi|86281250|gb|ABC90313.1| 5-amino-6-(5-phosphoribosylamino)uracil
           reductase/diaminohydroxyphosphoribosylaminopyrimidinedea
           minase protein [Rhizobium etli CFN 42]
          Length = 435

 Score = 88.0 bits (218), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 28/142 (19%), Positives = 45/142 (31%), Gaps = 21/142 (14%)

Query: 3   KGNVFMSCALEEAQN--AALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
               FM+ A+  ++           VG V V +  ++ +A            HAE  A+ 
Sbjct: 6   DDEGFMAAAIRLSRRHLGRTATNPSVGCVIVKDGVVVGQA----VTALGGRPHAEPQALA 61

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
               +           YVTLEPC        CA A+    + R+    ++P       G 
Sbjct: 62  EAGDLA-----RGATAYVTLEPCSHHGKTPPCAEALIACGVARVVISVTDPDPRVSGRGI 116

Query: 115 QFYTLATCHHSPEIYPGISEQR 136
                A       +  G+ E  
Sbjct: 117 SMLREAG----IAVDAGVLEAE 134


>gi|260767835|ref|ZP_05876770.1| diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Vibrio furnissii CIP 102972]
 gi|260617344|gb|EEX42528.1| diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Vibrio furnissii CIP 102972]
          Length = 369

 Score = 88.0 bits (218), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 35/152 (23%), Positives = 49/152 (32%), Gaps = 21/152 (13%)

Query: 4   GNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
               MS A++ AQ         P VG V      I+    +          HAE+ A+RM
Sbjct: 8   DYQMMSRAIKLAQRGRFTTAPNPNVGCVITQGESIVGEGFHFRAGE----PHAEVHALRM 63

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
                          YVTLEPC        CA  +  A + R+     +P       G  
Sbjct: 64  AGEQS-----VGATAYVTLEPCSHYGRTPPCAEGLIKAGVARVICAMQDPNPQVAGRGID 118

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
               A      E+  G+ E  +  +   F K 
Sbjct: 119 MLREAG----IEVQVGLLEADALALNPAFIKR 146


>gi|323487730|ref|ZP_08092988.1| hypothetical protein GPDM_00245 [Planococcus donghaensis MPA1U2]
 gi|323398464|gb|EGA91252.1| hypothetical protein GPDM_00245 [Planococcus donghaensis MPA1U2]
          Length = 162

 Score = 88.0 bits (218), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 32/157 (20%), Positives = 58/157 (36%), Gaps = 11/157 (7%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIR 60
           +   + +   +E A+ A  + + P G+V V     ++    N      D T H E    R
Sbjct: 4   ETDLMHLKRCVELAETALEKGDEPFGSVLVSETGDVLYEDHNHV-AGGDHTQHPEFAIAR 62

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNP-------KGGGIENG 113
                LS E   +  +Y + E C MCAAA     + R+ Y +S+          G   + 
Sbjct: 63  WAATNLSLEERSKATVYTSGEHCPMCAAAHGWVGLGRIVYASSSKQLAEWLSDMGAAPSR 122

Query: 114 TQFYTLATCHHSPEIYPGI--SEQRSRQIIQDFFKER 148
            +   +        +   +    +R  ++ Q  FK +
Sbjct: 123 VRNLAIREVIKDTIVEGPVPELAERMYELHQRSFKAK 159


>gi|259502164|ref|ZP_05745066.1| ubiquinol-cytochrome c reductase [Lactobacillus antri DSM 16041]
 gi|259169782|gb|EEW54277.1| ubiquinol-cytochrome c reductase [Lactobacillus antri DSM 16041]
          Length = 352

 Score = 88.0 bits (218), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 35/133 (26%), Positives = 50/133 (37%), Gaps = 21/133 (15%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC-- 83
           VGAV V N  +++    +        +HAE    R     L+        LYVTLEPC  
Sbjct: 27  VGAVVVKNGHVLATGHTQPYGG----SHAE----RDALSRLAPGQAAGATLYVTLEPCNH 78

Query: 84  ----TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139
                 C   I  + IRR+     +P       G          H  E+  G+  Q++ Q
Sbjct: 79  YGKQPPCTQLIINSGIRRVVVAQLDPHALVTGKGVANLRQ----HGIEVVTGVGAQQAAQ 134

Query: 140 IIQ--DFF-KERR 149
           +    DFF +  R
Sbjct: 135 VNPHYDFFYRHHR 147


>gi|119384080|ref|YP_915136.1| riboflavin biosynthesis protein RibD [Paracoccus denitrificans
           PD1222]
 gi|119373847|gb|ABL69440.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Paracoccus
           denitrificans PD1222]
          Length = 219

 Score = 88.0 bits (218), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 39/152 (25%), Positives = 51/152 (33%), Gaps = 25/152 (16%)

Query: 8   MSCALEEAQNAALRNEI----PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
           M  AL  A+   +R  +    PVG V V +  II+              HAE LA+    
Sbjct: 1   MGRALALARR--MRGHVWPNPPVGCVIVKDGTIIAEG----ETQPGGRPHAERLALNRAG 54

Query: 64  RILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFY 117
                       LYVTLEPC        CA AI  A + R+     +P       G    
Sbjct: 55  AAARGA-----TLYVTLEPCCHWGRTPPCADAIIAAGVTRVVAAMQDPDPRVDGGGFARL 109

Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             A      E+  G     +  I+  F    R
Sbjct: 110 RAAG----IEVTVGEGATDAAAIMSGFLHRTR 137


>gi|315497946|ref|YP_004086750.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase
           [Asticcacaulis excentricus CB 48]
 gi|315415958|gb|ADU12599.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase
           [Asticcacaulis excentricus CB 48]
          Length = 147

 Score = 88.0 bits (218), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 32/152 (21%), Positives = 50/152 (32%), Gaps = 24/152 (15%)

Query: 3   KGNVFMSCALEEA--QNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTA-HAEILAI 59
             +  M+ A+  A  Q        PVG V V +  +I+ A        D    HAE    
Sbjct: 2   SDSRHMARAIAMATAQLGRTVPNPPVGCVIVKDGVVIAEA-----ATGDGGRPHAE---- 52

Query: 60  RMGCRILSQEILPEVDLYVTLEPC-------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
                            YVTLEPC         C+  +  A + R+ +   +P       
Sbjct: 53  -EAALAQLDHRAEGATAYVTLEPCGARSHGGLSCSQRLVEAGVSRVVFACHDPSPFASHL 111

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
           G    + A      ++  G+    +  +I DF
Sbjct: 112 GIICMSEAGL----KVETGLMADEAAALIADF 139


>gi|163868466|ref|YP_001609675.1| riboflavin biosynthesis protein ribD [Bartonella tribocorum CIP
           105476]
 gi|161018122|emb|CAK01680.1| Riboflavin biosynthesis protein ribD [Bartonella tribocorum CIP
           105476]
          Length = 375

 Score = 88.0 bits (218), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 34/148 (22%), Positives = 53/148 (35%), Gaps = 26/148 (17%)

Query: 3   KGNVFMSCALEEAQN-AALRNEIP-VGAVAVLNNK-----IISRAGNRNRELKDVTAHAE 55
           +   FM+ A+  A+    L  E P VGA+ V N+      I+               HAE
Sbjct: 6   QDERFMAAAIRLAERHVGLTGENPSVGALIVQNDDCAGPFIVGYG----VTAFHGRPHAE 61

Query: 56  ILAIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGG 109
           + A+RM   +           YVTLEPC        C  A+  + I R+    ++     
Sbjct: 62  VQALRMAGPLAQ-----GATAYVTLEPCAHYGKTSPCVNALIDSGISRIVVALTDCDKRV 116

Query: 110 IENGTQFYTLATCHHSPEIYPGISEQRS 137
              G      A      ++  GI  + +
Sbjct: 117 DGRGLALLREAG----IKVVEGILAEEA 140


>gi|227548982|ref|ZP_03979031.1| guanine deaminase [Corynebacterium lipophiloflavum DSM 44291]
 gi|227078933|gb|EEI16896.1| guanine deaminase [Corynebacterium lipophiloflavum DSM 44291]
          Length = 150

 Score = 88.0 bits (218), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 32/91 (35%), Positives = 40/91 (43%), Gaps = 1/91 (1%)

Query: 8  MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
          +  A+E A  +A     P G V V    +     N      D +AHAEI AIR   R   
Sbjct: 4  LQRAVEIAVESARTGGGPFGCVVVTERGVY-EGHNEVVSRCDPSAHAEIQAIRAAARAQR 62

Query: 68 QEILPEVDLYVTLEPCTMCAAAISLARIRRL 98
             L    LY + +PC MC AAI  ARI  +
Sbjct: 63 SHELSGAVLYASGQPCPMCFAAIRWARIDEV 93


>gi|241761018|ref|ZP_04759107.1| riboflavin biosynthesis protein RibD [Zymomonas mobilis subsp.
           mobilis ATCC 10988]
 gi|241374637|gb|EER64098.1| riboflavin biosynthesis protein RibD [Zymomonas mobilis subsp.
           mobilis ATCC 10988]
          Length = 323

 Score = 88.0 bits (218), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 32/157 (20%), Positives = 58/157 (36%), Gaps = 24/157 (15%)

Query: 1   MKKGNVFMSCALEEAQ--NAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEIL 57
           ++    +M  A+   +           VG + V  +N+II R   ++        HAE +
Sbjct: 4   LENDIRWMQAAIALGERSKGLTAPSPSVGCIIVNKDNQIIGRGWTQSGGR----PHAEAM 59

Query: 58  AIRMGCRILSQEILPEVDLYVTLEPC-------TMCAAAISLARIRRLYYGASNPKGGGI 110
           A+         + L    +YVTLEPC         C+ ++  A   R+     +P     
Sbjct: 60  ALSQ------CQSLKGATVYVTLEPCAHKSNRGPTCSDSLVAALPERVVIACRDPDPRTN 113

Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
             G      A      ++  G+ E+++ Q +  FF  
Sbjct: 114 GQGISKMVAAG----IKVECGLLEKQAAQSMSGFFSR 146


>gi|262196460|ref|YP_003267669.1| riboflavin biosynthesis protein RibD [Haliangium ochraceum DSM
           14365]
 gi|262079807|gb|ACY15776.1| riboflavin biosynthesis protein RibD [Haliangium ochraceum DSM
           14365]
          Length = 367

 Score = 88.0 bits (218), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 36/153 (23%), Positives = 51/153 (33%), Gaps = 25/153 (16%)

Query: 8   MSCALEEAQNAALRN--EIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           M+  LE A+ A  R      VG V V    ++I+   +R         HAE  A+     
Sbjct: 1   MARCLELARRAEGRTAPNPMVGCVIVAPSGEVIAEGYHRRAGA----PHAEAEALAQL-- 54

Query: 65  ILSQEILPEVDLYVTLEPC--------TMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116
                  P   +YV LEPC          CA A++ A I RL  G  +P           
Sbjct: 55  ---DGRAPGCTMYVNLEPCRHRRKRRTVPCAPAVAEAGIARLVVGMGDPIRSHAGGAAWL 111

Query: 117 YTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
                      +  G+     R + + F    R
Sbjct: 112 ARQ-----GVSVTRGVLRADCRDLNRGFITRAR 139


>gi|218514099|ref|ZP_03510939.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase protein
           [Rhizobium etli 8C-3]
          Length = 179

 Score = 88.0 bits (218), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 29/142 (20%), Positives = 47/142 (33%), Gaps = 21/142 (14%)

Query: 3   KGNVFMSCALEEAQN--AALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
               FM+ A+  ++           VG + V +  I+ +A            HAE  A+ 
Sbjct: 6   DDEGFMAAAIRLSRQHLGRTATNPSVGCLIVKDGVIVGQA----VTALGGRPHAEPQALA 61

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
              ++           YVTLEPC        CA A+    + R+    ++P       G 
Sbjct: 62  EAGQLA-----RGATAYVTLEPCSHHGKTPPCAEALIAYGVARVVISVTDPDPRVSGRGI 116

Query: 115 QFYTLATCHHSPEIYPGISEQR 136
                A      E+  G+ E  
Sbjct: 117 TMLRDAG----IEVDAGVLEAE 134


>gi|126738756|ref|ZP_01754452.1| riboflavin biosynthesis protein RibD [Roseobacter sp. SK209-2-6]
 gi|126719937|gb|EBA16644.1| riboflavin biosynthesis protein RibD [Roseobacter sp. SK209-2-6]
          Length = 370

 Score = 88.0 bits (218), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 30/152 (19%), Positives = 48/152 (31%), Gaps = 21/152 (13%)

Query: 2   KKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
           +    +M+ AL   +         P VG V V   +I+ R   +         HAE  A+
Sbjct: 8   QTDARYMALALSLGRRGQGKCWPNPAVGCVIVKEGRIVGRGWTQPGGR----PHAEPQAL 63

Query: 60  RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113
                            YVTLEPC        CA A+  A +  +     +        G
Sbjct: 64  AQAGEAA-----RGATAYVTLEPCSHFGETPPCAQALIDAGVSHVVAAIEDSDPRVSGQG 118

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
            +   +A       +  G+  + +      FF
Sbjct: 119 FEMLRMAG----ITVRTGVLAEEAGLDHAGFF 146


>gi|322704161|gb|EFY95759.1| cytidine and deoxycytidylate deaminase [Metarhizium anisopliae
           ARSEF 23]
          Length = 469

 Score = 88.0 bits (218), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 22/56 (39%), Positives = 30/56 (53%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
              F+  AL+ A+ A   NE PVG V V N  II++  N     ++ T HAE +AI
Sbjct: 148 HLRFIEEALDMARLALRTNETPVGCVLVHNGTIIAKGMNATNVTRNGTRHAEFMAI 203



 Score = 72.6 bits (178), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 29/125 (23%), Positives = 47/125 (37%), Gaps = 40/125 (32%)

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL- 119
                +S+EI+ E  LYVT+EPC MCA+ +    I+++Y+GA N K GG       +   
Sbjct: 267 HAGDRVSREIIRECILYVTVEPCVMCASLLRQLGIKKVYFGAVNDKFGGTGGVFSIHANS 326

Query: 120 ---------ATCHHSP------------------------------EIYPGISEQRSRQI 140
                    A+ H +P                              EI  G     +  +
Sbjct: 327 LPVREDGQTASAHPTPRPSQLPDGSGTLGTSYPPGGGDGGNVEEGYEIEGGWGRDEAVGL 386

Query: 141 IQDFF 145
           ++ F+
Sbjct: 387 LRRFY 391


>gi|189425488|ref|YP_001952665.1| CMP/dCMP deaminase zinc-binding [Geobacter lovleyi SZ]
 gi|189421747|gb|ACD96145.1| CMP/dCMP deaminase zinc-binding [Geobacter lovleyi SZ]
          Length = 194

 Score = 88.0 bits (218), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 30/99 (30%), Positives = 42/99 (42%), Gaps = 7/99 (7%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNK--IISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           +  A E A+ A   +  P GAV V  +   ++ + GN    L D   HAE +  R     
Sbjct: 48  LRTANEAAKEAMKSDHPPFGAVLVAPDGETVLMKQGN--VSLMD---HAETVIARQAFVK 102

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASN 104
              + L +  L   +EPC MCA  I  A I  + YG   
Sbjct: 103 YDPDYLWKCTLVTNVEPCAMCAGNIYWANIGNVVYGVEE 141


>gi|84387508|ref|ZP_00990526.1| Probable riboflavin biosynthesis protein RibD [Vibrio splendidus
           12B01]
 gi|84377556|gb|EAP94421.1| Probable riboflavin biosynthesis protein RibD [Vibrio splendidus
           12B01]
          Length = 145

 Score = 88.0 bits (218), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 34/149 (22%), Positives = 56/149 (37%), Gaps = 21/149 (14%)

Query: 4   GNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
              +M  ALE ++ A    +   PVG V V N+K++S    +         HAE+ A+  
Sbjct: 2   NQQYMLQALEASRQALPDCQPNPPVGCVLVKNDKVVSVGYTQKVGGN----HAEVEALNS 57

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
               L  E +  +  YVTLEPC        CA  +  A ++ +     +P       G  
Sbjct: 58  YDDGLDGE-MEGITAYVTLEPCSFVGRTPACANTLVKAGVKHVVVAMLDPDPRNNGRGVA 116

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDF 144
                   H  ++  G+     +  +  F
Sbjct: 117 ILES----HGVKVDVGL----CQAQVSAF 137


>gi|163747444|ref|ZP_02154796.1| riboflavin biosynthesis protein ribD [Oceanibulbus indolifex
           HEL-45]
 gi|161379297|gb|EDQ03714.1| riboflavin biosynthesis protein ribD [Oceanibulbus indolifex
           HEL-45]
          Length = 370

 Score = 88.0 bits (218), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 35/153 (22%), Positives = 49/153 (32%), Gaps = 25/153 (16%)

Query: 3   KGNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
               FM+ AL   +    +  +   P VG V V   +II R             HAE  A
Sbjct: 7   SDARFMALALSLGRRG--QGNVWPNPAVGCVIVQGTRIIGRGW--THPGGRP--HAEPQA 60

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
           +                +YVTLEPC        CA A+  A + R+     +        
Sbjct: 61  LAQAGEAA-----RGATVYVTLEPCSHHGKTPPCAQALINAGVARVVIATQDDDARVNGR 115

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
           G      A      ++  G  E  +R     FF
Sbjct: 116 GIAMLRAAG----IDVSVGEREAEARADHAGFF 144


>gi|307945264|ref|ZP_07660600.1| riboflavin biosynthesis protein RibD [Roseibium sp. TrichSKD4]
 gi|307771137|gb|EFO30362.1| riboflavin biosynthesis protein RibD [Roseibium sp. TrichSKD4]
          Length = 376

 Score = 88.0 bits (218), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 35/135 (25%), Positives = 51/135 (37%), Gaps = 26/135 (19%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEI----PVGAVAVLNNK-----IISRAGNRNRELKDVT 51
           M+    FM+ A   A+      E+    PV A+ V  N+     ++ R     R  K   
Sbjct: 6   MQTDLRFMAAAERYARRGL--GEVWPNPPVAALIVRENENGQHVVVGRG----RTSKPGG 59

Query: 52  AHAEILAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNP 105
            HAE+ A+ M               YVTLEPC        C+ A+  A I+R+  G  +P
Sbjct: 60  PHAEVNALTMAGTAA-----KGATCYVTLEPCSHYGRTPPCSVALVEAGIKRVVIGMRDP 114

Query: 106 KGGGIENGTQFYTLA 120
                  G +    A
Sbjct: 115 NPRVAGRGIKMLEEA 129


>gi|240850690|ref|YP_002972090.1| riboflavin biosynthesis protein ribD [Bartonella grahamii as4aup]
 gi|240267813|gb|ACS51401.1| riboflavin biosynthesis protein ribD [Bartonella grahamii as4aup]
          Length = 375

 Score = 88.0 bits (218), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 33/148 (22%), Positives = 53/148 (35%), Gaps = 26/148 (17%)

Query: 3   KGNVFMSCALEEAQN-AALRNEIP-VGAVAVLNNK-----IISRAGNRNRELKDVTAHAE 55
           +   FM+ A+  A+    L  E P VG + V N+      I+             + HAE
Sbjct: 6   QDERFMAAAIRLAERHVGLTGENPSVGTLIVRNDNSAGAFIVGYG----VTAIHGSPHAE 61

Query: 56  ILAIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGG 109
           + A+ M   +           YVTLEPC        C  A+  + I R+    ++     
Sbjct: 62  VQALHMAGSLAQ-----GATAYVTLEPCAHYGKTSPCVNALIDSGISRVVVALTDCDKRV 116

Query: 110 IENGTQFYTLATCHHSPEIYPGISEQRS 137
             +G      A      E+  GI  + +
Sbjct: 117 DGHGIALLRAAG----IEVVEGILAEEA 140


>gi|15834728|ref|NP_296487.1| riboflavin-specific deaminase [Chlamydia muridarum Nigg]
 gi|7190138|gb|AAF38983.1| riboflavin-specific deaminase [Chlamydia muridarum Nigg]
          Length = 396

 Score = 88.0 bits (218), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 35/156 (22%), Positives = 60/156 (38%), Gaps = 23/156 (14%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           ++   FM  A+   +   +    P   VG V V N  II R  ++       + HAE+ A
Sbjct: 31  EQQLFFMREAVALGERGRIFA-PPNPWVGCVIVKNGCIIGRGWHKGI----GSPHAEVCA 85

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
            +          L   D+YVTLEPC        C   +  +++  +Y    +P     + 
Sbjct: 86  FQ-----DQTSSLVGADVYVTLEPCCHFGRTPPCVDLLIKSKVSSVYIALLDPDPRVCKR 140

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKER 148
           G      A       +Y GI  + ++  +Q +  +R
Sbjct: 141 GVARLKEAG----ISVYVGIGHEEAKASLQPYLHQR 172


>gi|154273008|ref|XP_001537356.1| hypothetical protein HCAG_07665 [Ajellomyces capsulatus NAm1]
 gi|150415868|gb|EDN11212.1| hypothetical protein HCAG_07665 [Ajellomyces capsulatus NAm1]
          Length = 180

 Score = 88.0 bits (218), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 29/144 (20%), Positives = 48/144 (33%), Gaps = 26/144 (18%)

Query: 14  EAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPE 73
             + A    E PVG V V N+++I    N   +  + T HAE LAI    R     IL  
Sbjct: 1   MGEEALASGETPVGCVLVHNDEVIGSGMNDTNKSMNGTRHAEFLAIEEVLRKSGMSILGA 60

Query: 74  ----------VDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123
                       +Y   E       +    R   +       K  GI  G+         
Sbjct: 61  QMNVLEGLEVSSIYTPSES-----MSTFYNRQGSV------AKTIGITFGS-----PGID 104

Query: 124 HSPEIYPGISEQRSRQIIQDFFKE 147
               +  G+  + +  +++ F+ +
Sbjct: 105 PPYGLTGGLFRKEAIMLLRRFYIQ 128


>gi|167946681|ref|ZP_02533755.1| hypothetical protein Epers_09088 [Endoriftia persephone
           'Hot96_1+Hot96_2']
          Length = 112

 Score = 88.0 bits (218), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 1/66 (1%)

Query: 85  MCAAAISLARIRRLYYGASNPKGGGIENGTQFY-TLATCHHSPEIYPGISEQRSRQIIQD 143
           MCA AI  AR++R+ Y AS+P+ G   +      +    +H  E   G+   +S   ++D
Sbjct: 1   MCAGAIVHARVKRVVYAASDPRSGAAGSVFDLLPSDQRFNHRVESEGGLLSGQSANRLRD 60

Query: 144 FFKERR 149
           FF+ RR
Sbjct: 61  FFRARR 66


>gi|148656622|ref|YP_001276827.1| CMP/dCMP deaminase [Roseiflexus sp. RS-1]
 gi|148568732|gb|ABQ90877.1| CMP/dCMP deaminase, zinc-binding [Roseiflexus sp. RS-1]
          Length = 190

 Score = 87.7 bits (217), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 25/150 (16%), Positives = 48/150 (32%), Gaps = 11/150 (7%)

Query: 3   KGNVFMSCALEEAQNAALRN-EIPVGAVAVL--NNKIISRAGNRNRELKDVTAHAEILAI 59
                M   ++ A+         P  A      +  +++   N    L +   HAE++A+
Sbjct: 28  DDESRMRLVIDLARENITHGTGGPFAAAVFRAGDGLLVAAGVNSVTRLNNAMLHAEVVAL 87

Query: 60  RMGCRILSQEILPE----VDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN--G 113
                 +    L       +L  + EPC MC  A   + ++RL  GA+      I    G
Sbjct: 88  MFAQARVGSYSLRGAGAPYELVTSCEPCAMCLGATLWSGVQRLVCGATRDDAERIGFDEG 147

Query: 114 TQFYTLATCHHS--PEIYPGISEQRSRQII 141
             F             +   +    +  ++
Sbjct: 148 PVFAESYAYLERRGIAVVRQVLRTEAADVL 177


>gi|77918274|ref|YP_356089.1| cytosine/adenosine deaminase [Pelobacter carbinolicus DSM 2380]
 gi|77544357|gb|ABA87919.1| cytosine/adenosine deaminase [Pelobacter carbinolicus DSM 2380]
          Length = 193

 Score = 87.7 bits (217), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 32/143 (22%), Positives = 61/143 (42%), Gaps = 15/143 (10%)

Query: 8   MSCALEEAQNAALRN-EIPVGAVA--VLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           M  A+E A++        P GA    + + ++I+   N         AHAE++A+ +  +
Sbjct: 32  MRLAIELAEHNIRHGSGGPFGAAVFDLDSGRLIAPGVNLVTSTCCSVAHAELVALMLAQK 91

Query: 65  ILSQEILPEV----DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
            +    L +     +L  + EPC MC  A+  A +++L  GA       +          
Sbjct: 92  YVGSFSLADAGRNAELTSSTEPCAMCLGALPWAGLKQLACGARETDARAVGFDE------ 145

Query: 121 TCHHSPEIYPGISEQRSRQIIQD 143
                P  +PG+ E+R  ++++D
Sbjct: 146 --GDKPPQWPGLLEKRGIRVLRD 166


>gi|307189599|gb|EFN73960.1| tRNA-specific adenosine deaminase-like protein 3 [Camponotus
           floridanus]
          Length = 418

 Score = 87.7 bits (217), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 20/80 (25%), Positives = 42/80 (52%)

Query: 64  RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123
                 +     +++ +EPC MCA A+  +R+  ++YGA N   G + +    +T+   +
Sbjct: 331 EKCGPYLCTGYWVFLLMEPCPMCAMALLHSRVAMIFYGAVNQNLGVLGSRAVLHTVPGLN 390

Query: 124 HSPEIYPGISEQRSRQIIQD 143
           H   ++ GI E+  RQ++++
Sbjct: 391 HRYRVWSGILERECRQMVEE 410


>gi|270284895|ref|ZP_06194289.1| riboflavin-specific deaminase [Chlamydia muridarum Nigg]
 gi|270288923|ref|ZP_06195225.1| riboflavin-specific deaminase [Chlamydia muridarum Weiss]
 gi|13633863|sp|Q9PLJ6|RIBD_CHLMU RecName: Full=Riboflavin biosynthesis protein RibD; Includes:
           RecName:
           Full=Diaminohydroxyphosphoribosylaminopyrimidine
           deaminase; Short=DRAP deaminase; AltName:
           Full=Riboflavin-specific deaminase; Includes: RecName:
           Full=5-amino-6-(5-phosphoribosylamino)uracil reductase;
           AltName: Full=HTP reductase
          Length = 371

 Score = 87.7 bits (217), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 35/156 (22%), Positives = 60/156 (38%), Gaps = 23/156 (14%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           ++   FM  A+   +   +    P   VG V V N  II R  ++       + HAE+ A
Sbjct: 6   EQQLFFMREAVALGERGRIFA-PPNPWVGCVIVKNGCIIGRGWHKGI----GSPHAEVCA 60

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
            +          L   D+YVTLEPC        C   +  +++  +Y    +P     + 
Sbjct: 61  FQ-----DQTSSLVGADVYVTLEPCCHFGRTPPCVDLLIKSKVSSVYIALLDPDPRVCKR 115

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKER 148
           G      A       +Y GI  + ++  +Q +  +R
Sbjct: 116 GVARLKEAG----ISVYVGIGHEEAKASLQPYLHQR 147


>gi|91977144|ref|YP_569803.1| riboflavin biosynthesis protein RibD [Rhodopseudomonas palustris
           BisB5]
 gi|91683600|gb|ABE39902.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Rhodopseudomonas palustris BisB5]
          Length = 396

 Score = 87.7 bits (217), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 37/154 (24%), Positives = 51/154 (33%), Gaps = 21/154 (13%)

Query: 4   GNVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
              FM  AL   +    R      VGAV V +  I+ R             HAE+ A+  
Sbjct: 28  DLRFMQLALTLGRRGLGRTATNPAVGAVIVKDGVILGRGW--TEVGGRP--HAEVEAL-- 81

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
                + E      LYVTLEPC        CA A+  A I R+     +P       G  
Sbjct: 82  ---ARAGEAARGATLYVTLEPCSHVGRSPPCADAVIAAGISRVVSAIEDPNPLVAGQGHD 138

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
               A       +  G+    + +     F+  R
Sbjct: 139 KLRAAG----IAVDVGLCAAEAARDHAGHFRRVR 168


>gi|124265967|ref|YP_001019971.1| hypothetical protein Mpe_A0774 [Methylibium petroleiphilum PM1]
 gi|124258742|gb|ABM93736.1| conserved hypothetical protein [Methylibium petroleiphilum PM1]
          Length = 166

 Score = 87.7 bits (217), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 30/100 (30%), Positives = 42/100 (42%), Gaps = 7/100 (7%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNN--KIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           +  A   A +A      P GA+ +  +   +++  GN      D   HAE   +R     
Sbjct: 18  LHRANAVALSALALGRHPFGALLLAPDHQTVLAEQGN-----IDTVQHAEATLLRTAAAK 72

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNP 105
            + E L +  L  T EPC MCA     A I R+ YGAS  
Sbjct: 73  HAPEFLWDCTLVTTFEPCAMCAGTAYWANIGRVVYGASEE 112


>gi|71282342|ref|YP_267480.1| riboflavin biosynthesis protein RibD [Colwellia psychrerythraea
           34H]
 gi|71148082|gb|AAZ28555.1| riboflavin biosynthesis protein RibD [Colwellia psychrerythraea
           34H]
          Length = 389

 Score = 87.7 bits (217), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 35/149 (23%), Positives = 57/149 (38%), Gaps = 21/149 (14%)

Query: 8   MSCALEEAQNA-ALRNEIP-VGAVAVLN----NKIISRAGNRNRELKDVTAHAEILAIRM 61
           MS A++ A+      +  P VG V V       K+I    ++         HAE+ A+  
Sbjct: 1   MSRAIDLAKKGHFTTSPNPRVGCVLVSYKEGVGKVIGEGYHQKAGQG----HAEVNALAE 56

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
             ++ +  ++     YVTLEPC        CA A+  A +  +     +P      NG  
Sbjct: 57  A-KVNNPALIKGATAYVTLEPCSHFGRTPPCAKALVDAGVSHVIAAMVDPNPQVSGNGLS 115

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDF 144
               A       +  G+ EQ +R +   F
Sbjct: 116 LLEKAG----ITVQSGLLEQSARLLNVGF 140


>gi|320108304|ref|YP_004183894.1| riboflavin biosynthesis protein RibD [Terriglobus saanensis SP1PR4]
 gi|319926825|gb|ADV83900.1| riboflavin biosynthesis protein RibD [Terriglobus saanensis SP1PR4]
          Length = 397

 Score = 87.7 bits (217), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 33/149 (22%), Positives = 52/149 (34%), Gaps = 21/149 (14%)

Query: 4   GNVFMSCALEEAQN--AALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
               M  AL  A+           VG V     +I+ +  +R         HAEI+A++ 
Sbjct: 9   DRRHMEQALTLARATSGLASPNPQVGCVLAHGEEIVGQGAHRYVARD----HAEIVALKQ 64

Query: 62  GCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQ 115
                          YVTLEPC+       CA A+  A + R+     +P      +G  
Sbjct: 65  A-----DGKAKGATAYVTLEPCSHHGRTGPCANALIEAGVARVVAATLDPNPKVSGSGMA 119

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDF 144
               A          G+ E+++R +   F
Sbjct: 120 RIEQAGIVAQ----HGLLEEQARAMNDAF 144


>gi|160896589|ref|YP_001562171.1| CMP/dCMP deaminase [Delftia acidovorans SPH-1]
 gi|160362173|gb|ABX33786.1| CMP/dCMP deaminase zinc-binding [Delftia acidovorans SPH-1]
          Length = 174

 Score = 87.7 bits (217), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 32/154 (20%), Positives = 53/154 (34%), Gaps = 18/154 (11%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNK--IISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           +  A   A  A      P GA+ +  +   +++  GN      D   HAE    R     
Sbjct: 26  LRRAGAVAGRAMAMGRHPFGALLLAPDGETVLAEQGN-----IDTVNHAESTLARTAAAN 80

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIE---------NGTQF 116
                L +  L  T EPC MCA  I  A I R+ YGA       +          +    
Sbjct: 81  YPGAYLAQCTLVTTFEPCAMCAGTIYWAGIGRVLYGAEETALLALTGDHPENPTLSLPCR 140

Query: 117 YTLATCHHSPEIYPGI--SEQRSRQIIQDFFKER 148
              A    + ++   +    +   +  + F+++R
Sbjct: 141 EVFARGQRAVQVIGPVPALHEEMLEPHRGFWQQR 174


>gi|152993547|ref|YP_001359268.1| riboflavin biosynthesis protein RibG [Sulfurovum sp. NBC37-1]
 gi|151425408|dbj|BAF72911.1| riboflavin biosynthesis protein RibG [Sulfurovum sp. NBC37-1]
          Length = 330

 Score = 87.7 bits (217), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 38/174 (21%), Positives = 61/174 (35%), Gaps = 47/174 (27%)

Query: 3   KGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIIS-RAGNRNRELKDVTAHAEILA 58
               +M  AL++A         P   VGAV  L+  I++  A       K  T+HAE+LA
Sbjct: 2   SDEFYMQLALDKAWE-YQLLTYPNPAVGAVVTLDGTILAVEAH-----KKAGTSHAEVLA 55

Query: 59  I---------------RMGCRILSQE-------ILPEVDLYVTLEPC------TMCAAAI 90
           +               RM  +               E  +YVTLEPC        CA  +
Sbjct: 56  LLKAYETLSQSTVDFDRMDAQKAHNFLHTIPKDFFSECSIYVTLEPCSHEGRTPACATLL 115

Query: 91  SLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
               ++++  G  +P  G      +               G+ E+  + +I+ F
Sbjct: 116 EALNLKKVIIGTKDPIEGHGGGMDRLKNN---------TSGVLEEACQALIEPF 160


>gi|91792502|ref|YP_562153.1| riboflavin biosynthesis protein RibD [Shewanella denitrificans
           OS217]
 gi|91714504|gb|ABE54430.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase /
           diaminohydroxyphosphoribosylaminopyrimidine deaminase
           [Shewanella denitrificans OS217]
          Length = 378

 Score = 87.7 bits (217), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 29/154 (18%), Positives = 55/154 (35%), Gaps = 18/154 (11%)

Query: 4   GNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
               MS A++ A+         P VG V V +   ++   ++         HAE+ A+  
Sbjct: 8   DIEMMSRAIQLAERGRYTTRPNPCVGCVIVKDGIKLAEGYHQKAGFG----HAEVNAL-- 61

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
                +         YVTLEPC        CA  +  + + ++    ++        G  
Sbjct: 62  AALKSANLSAIGATAYVTLEPCSHFGRTPPCAQTLVESGVAKVVVAITDANPQVAGKGIA 121

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
               A    + E+  G+ + ++ ++   F K  R
Sbjct: 122 MLREAGI--AVEV--GLLQAQALELNLGFMKRMR 151


>gi|313664896|ref|YP_004046767.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Mycoplasma leachii PG50]
 gi|312950055|gb|ADR24651.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Mycoplasma leachii PG50]
          Length = 147

 Score = 87.7 bits (217), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 43/150 (28%), Positives = 68/150 (45%), Gaps = 4/150 (2%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAI 59
           M   N  +   + E++     N+IPV    +  NN I+S A N   + KD++ HAEI  I
Sbjct: 1   MDDFNNILDLLINESKKTIKHNDIPVSCCIIDSNNNILSLAINSRYKNKDISQHAEINVI 60

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
                 L+   L +  L  TLEPC MC +AI   +I  +YY   + K G I+N       
Sbjct: 61  NNLINKLNNFNLSKYKLITTLEPCMMCYSAIKQVKINTIYYLVESYKFG-IKNNYSI-ND 118

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
              +   +I     +    +++ +FF  +R
Sbjct: 119 QNLN-LIQIKNQKKQTEYIKLLNNFFINKR 147


>gi|320531168|ref|ZP_08032158.1| guanine deaminase family protein [Actinomyces sp. oral taxon 171
           str. F0337]
 gi|320136617|gb|EFW28575.1| guanine deaminase family protein [Actinomyces sp. oral taxon 171
           str. F0337]
          Length = 157

 Score = 87.7 bits (217), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 30/118 (25%), Positives = 44/118 (37%), Gaps = 2/118 (1%)

Query: 1   MKKG-NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISR-AGNRNRELKDVTAHAEILA 58
           M       M  A+  +        +P   V V   ++IS    NR +E  D +AHAEI A
Sbjct: 1   MTNHLEQIMRQAVVRSITHVESGGLPFVGVIVDGQQVISEFGVNRVQETGDPSAHAEITA 60

Query: 59  IRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116
           IR       +  L    +  T EPC MC      ARI  +       +   +    ++
Sbjct: 61  IRDALTSSGRTDLRGTTILATGEPCGMCYRHAVNARIADIRVAVDRDQVAELGFDYRY 118


>gi|256545035|ref|ZP_05472403.1| riboflavin biosynthesis protein RibD [Anaerococcus vaginalis ATCC
           51170]
 gi|256399331|gb|EEU12940.1| riboflavin biosynthesis protein RibD [Anaerococcus vaginalis ATCC
           51170]
          Length = 359

 Score = 87.7 bits (217), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 38/155 (24%), Positives = 58/155 (37%), Gaps = 31/155 (20%)

Query: 3   KGNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
               +M    E A+ A  R +    P VGAV V +NKIIS   +          HAE+  
Sbjct: 2   NDKEYMRKCFELAKKA--RGKTLTNPLVGAVLVKDNKIISTGFHHEYGK----THAEVDC 55

Query: 59  IRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGA--SNPKGGGI 110
                    +       LYV LEPC+       C   I    I+++      +NPK    
Sbjct: 56  FNNL-----KSDCDGAILYVNLEPCSHWGKQGPCTLEIIKRNIKKVIISNIDTNPKV--- 107

Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
            +G +           E+  G+ E   +++ + FF
Sbjct: 108 -DGLKVLKDNN----IEVVTGLLEDEGKKLNEKFF 137


>gi|330842863|ref|XP_003293388.1| hypothetical protein DICPUDRAFT_58458 [Dictyostelium purpureum]
 gi|325076278|gb|EGC30077.1| hypothetical protein DICPUDRAFT_58458 [Dictyostelium purpureum]
          Length = 221

 Score = 87.7 bits (217), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 27/141 (19%), Positives = 54/141 (38%), Gaps = 16/141 (11%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMG 62
              +M  A++ A +   +      A  V  N  ++    N  R       H EI AI   
Sbjct: 49  HEKYMRIAIQVAIDNNAK----FAAAIVHKNGTVMCTGVNTGRAR---IYHGEIEAIVNC 101

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG--------IENGT 114
            ++  ++   +  LY T EPC MC+ AI  ++  +  + +               +++  
Sbjct: 102 TQMYGKKTWEDHYLYTTGEPCVMCSGAIMWSKFDKTIFASYVNNMYCERCFNQLPMDSNE 161

Query: 115 QFYTLATCHHSPEIYPGISEQ 135
            F      +H+ ++  G+ E+
Sbjct: 162 IFKLGYGINHNTQLIGGVLEE 182


>gi|90424160|ref|YP_532530.1| riboflavin biosynthesis protein RibD [Rhodopseudomonas palustris
           BisB18]
 gi|90106174|gb|ABD88211.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Rhodopseudomonas palustris BisB18]
          Length = 383

 Score = 87.7 bits (217), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 34/143 (23%), Positives = 47/143 (32%), Gaps = 21/143 (14%)

Query: 4   GNVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
              FM  AL   +    R      VGAV V +  I+ R   +         HAEI A+  
Sbjct: 21  DLRFMQLALSLGRRGQGRTAPNPAVGAVIVKDGVIVGRGWTQPGGR----PHAEIEALNR 76

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
                         LYVTLEPC        CA A+  A + R+     +P       G  
Sbjct: 77  AGLAA-----RGATLYVTLEPCSHHGKTPPCADAVIAAGLARVVSAIEDPNPQVAGQGHA 131

Query: 116 FYTLATCHHSPEIYPGISEQRSR 138
               A      ++  G+    + 
Sbjct: 132 RLRAAGI--RVDV--GLGAAEAA 150


>gi|33862648|ref|NP_894208.1| putative diaminohydroxyphosphoribosylaminopyrimidine deaminase and
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Prochlorococcus marinus str. MIT 9313]
 gi|33634564|emb|CAE20550.1| putative Diaminohydroxyphosphoribosylaminopyrimidine deaminase and
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Prochlorococcus marinus str. MIT 9313]
          Length = 368

 Score = 87.3 bits (216), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 34/147 (23%), Positives = 51/147 (34%), Gaps = 22/147 (14%)

Query: 7   FMSCALEEAQNAALRNEI-P-VGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
           +M  AL+ A  A  R    P VGAV +    K++    +          HAE+ A+    
Sbjct: 14  WMRRALQLAALADGRTSPNPLVGAVVLDKAGKLVGEGFHACAGE----PHAEVGALAQAG 69

Query: 64  RILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFY 117
           +           L VTLEPC        C  A+  A +RR+     +P       G    
Sbjct: 70  KQA-----SGGTLLVTLEPCCHQGRTPPCTEAVIAAGLRRVVVAMQDPDPRVAGAGITRL 124

Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDF 144
             A      E+   + E  +    + F
Sbjct: 125 RDAGL----EVITAVLELEAAHQNRAF 147


>gi|212696303|ref|ZP_03304431.1| hypothetical protein ANHYDRO_00840 [Anaerococcus hydrogenalis DSM
           7454]
 gi|212676932|gb|EEB36539.1| hypothetical protein ANHYDRO_00840 [Anaerococcus hydrogenalis DSM
           7454]
          Length = 359

 Score = 87.3 bits (216), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 37/155 (23%), Positives = 58/155 (37%), Gaps = 31/155 (20%)

Query: 3   KGNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
               +M    + A+ A  R +    P VGAV V + KIIS   +          HAE+  
Sbjct: 2   NDKYYMKKCFDLAKKA--RGKTLKNPLVGAVLVKDGKIISTGYHHEYGK----VHAEVDC 55

Query: 59  IRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGA--SNPKGGGI 110
                    +E      LYV LEPC+       C   I    I+++      +NPK    
Sbjct: 56  FNNL-----KENADGAVLYVNLEPCSHYGKQGPCTLEIIKRNIKKVIISNIDTNPKV--- 107

Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
            +G +           E+  G+ E   +++ + FF
Sbjct: 108 -DGLKVLREKG----IEVQTGLLEDEGKKLNEKFF 137


>gi|146308130|ref|YP_001188595.1| CMP/dCMP deaminase, zinc-binding [Pseudomonas mendocina ymp]
 gi|145576331|gb|ABP85863.1| CMP/dCMP deaminase, zinc-binding protein [Pseudomonas mendocina
           ymp]
          Length = 186

 Score = 87.3 bits (216), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 32/117 (27%), Positives = 50/117 (42%), Gaps = 2/117 (1%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTA-HAEILAIRM 61
            + +     E+A  A       VGAV + +  +++    N+       +A HAE+  +  
Sbjct: 19  DDTWARLCCEQALLALEEGCYAVGAVLIDDAGELLCSGRNQVFAGHYASAAHAEMQVLDQ 78

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
                 Q     + LYV+LEPC MC + I LA IRR+ Y A +  GG      +   
Sbjct: 79  LEAEHPQLDRSGLTLYVSLEPCLMCHSRILLAGIRRVRYLARDRDGGFAARPPRLPR 135


>gi|126641361|ref|YP_001084345.1| CMP/dCMP deaminase zinc-binding [Acinetobacter baumannii ATCC
           17978]
          Length = 116

 Score = 87.3 bits (216), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 26/75 (34%), Positives = 38/75 (50%), Gaps = 1/75 (1%)

Query: 46  ELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNP 105
              D TAHAE+LAIR+  ++L    L    ++ +  PC MC AA+ LA I+ + Y  SN 
Sbjct: 2   TTNDPTAHAELLAIRVASQVLGTANLEGCSVFASGHPCPMCMAAMRLAGIKTVNYAYSNE 61

Query: 106 KGGGIE-NGTQFYTL 119
            G     +  + Y  
Sbjct: 62  DGAPFGLSTAEIYAD 76


>gi|149391445|gb|ABR25740.1| tRNA-specific adenosine deaminase [Oryza sativa Indica Group]
          Length = 106

 Score = 87.3 bits (216), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 25/88 (28%), Positives = 43/88 (48%), Gaps = 9/88 (10%)

Query: 69  EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC------ 122
           E     DLYVT EPC MCA A+S+  IR +Y+G +N K GG  +    +  ++       
Sbjct: 2   EKFARCDLYVTCEPCIMCAMALSILGIREVYFGCANDKFGGCGSIMSLHQSSSAELSGEE 61

Query: 123 ---HHSPEIYPGISEQRSRQIIQDFFKE 147
                  +   GI  + +  + ++F+++
Sbjct: 62  IPGPKGYKCTGGIMAEEAVALFRNFYEQ 89


>gi|254516856|ref|ZP_05128914.1| riboflavin biosynthesis protein RibD [gamma proteobacterium NOR5-3]
 gi|219674361|gb|EED30729.1| riboflavin biosynthesis protein RibD [gamma proteobacterium NOR5-3]
          Length = 365

 Score = 87.3 bits (216), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 32/145 (22%), Positives = 53/145 (36%), Gaps = 21/145 (14%)

Query: 8   MSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M+ AL  A+      R    VG V V ++ I+     +         HAE++A++     
Sbjct: 1   MARALRLAERGKYWARPNPHVGCVLVRDSGIVGEGFTQPAGGD----HAEVVALKSAGDA 56

Query: 66  LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
                  +   YVTLEPC        C+ A+  A + R+  G  +P       G +    
Sbjct: 57  A-----RDCTAYVTLEPCAHVGRTPPCSQALIEAGVARVVVGLKDPNPKVDGGGLRDLAA 111

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDF 144
           A      E+  G+   +    +  F
Sbjct: 112 AG----IEVSEGLMAAQVELQLAGF 132


>gi|149174623|ref|ZP_01853249.1| riboflavin biosynthesis protein RibD [Planctomyces maris DSM 8797]
 gi|148846733|gb|EDL61070.1| riboflavin biosynthesis protein RibD [Planctomyces maris DSM 8797]
          Length = 377

 Score = 87.3 bits (216), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 36/151 (23%), Positives = 62/151 (41%), Gaps = 26/151 (17%)

Query: 8   MSCALEEAQNAALRNEI---P-VGAVAVLNN-KIISRAGNRNRELKDVTAHAEILAIRMG 62
           M  ALE A+       +   P VG++ V ++ K+I    ++    +    HAEI A+ M 
Sbjct: 14  MHRALELARRG--TGSVEPNPAVGSIIVDHSLKLIGEGYHQ----QCGGPHAEIHALNMA 67

Query: 63  CRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQF 116
                        +YVTLEPC        C+ A+  A I+++     +P       G + 
Sbjct: 68  GEQSQ-----GKTIYVTLEPCCHQGKTGPCSQALIRAGIKKVVIAMRDPAPHVDGGGIEE 122

Query: 117 YTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
              A      E+  G+ E  ++ +++ F K 
Sbjct: 123 LKQAG----IEVEVGLLESEAQALVRPFVKR 149


>gi|322489137|emb|CBZ24389.1| putative deaminase [Leishmania mexicana MHOM/GT/2001/U1103]
          Length = 281

 Score = 87.3 bits (216), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 43/198 (21%), Positives = 59/198 (29%), Gaps = 78/198 (39%)

Query: 1   MKKG--NVFMSCALEEAQNAALRNEIPVGAVAVLNNK----------------------- 35
           M     + FM  AL+EA+ A    E+PVG V V  +                        
Sbjct: 1   MSVHYVDAFMRAALKEAELALEEGEVPVGCVLVRTDTNETVYAKLALQLSDDVVNASPHA 60

Query: 36  -------------IISRAGNRNRELKDVTAHAEILA----IRMGCRILSQEI-------- 70
                        I +R  N+        AHAE +A    I    R              
Sbjct: 61  APPLSCDQLVESCIAARGRNQTNLQHHALAHAEFIAAQKLIDSATRGGDGSAGARSSKAG 120

Query: 71  ----------------------------LPEVDLYVTLEPCTMCAAAISLARIRRLYYGA 102
                                       L +  LYVT+EPC MC A +   RI  +++G 
Sbjct: 121 AGEGENGLVEEEKESGSTSSPTTPPLSGLADYVLYVTVEPCVMCGAMLLYNRIAHVFFGC 180

Query: 103 SNPKGGGIENGTQFYTLA 120
            NP+ GG       +T  
Sbjct: 181 RNPRFGGNGTVLALHTSP 198


>gi|167563753|ref|ZP_02356669.1| riboflavin biosynthesis protein RibD [Burkholderia oklahomensis
           EO147]
          Length = 369

 Score = 87.3 bits (216), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 33/145 (22%), Positives = 52/145 (35%), Gaps = 18/145 (12%)

Query: 8   MSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M  AL  A          P VG V V N+ +I     +         HAE+ A++     
Sbjct: 1   MQRALALAARGMYTTTPNPRVGCVIVQNDVVIGEGFTQPAGQD----HAEVQALKDA--R 54

Query: 66  LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
                L +  +YVTLEPC        CA A+  AR+ ++     +P       G      
Sbjct: 55  TRGGDLRDATVYVTLEPCSHFGRTPPCAHALIDARVGKVVAAMEDPNPQVSGRGLAMLRD 114

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDF 144
           A      ++  G+    + ++   F
Sbjct: 115 AG----IDVRCGLLTHEAHEMNIGF 135


>gi|149181584|ref|ZP_01860078.1| cytidine/deoxycytidylate deaminase/nudix/methyltransferase domains
           protein [Bacillus sp. SG-1]
 gi|148850698|gb|EDL64854.1| cytidine/deoxycytidylate deaminase/nudix/methyltransferase domains
           protein [Bacillus sp. SG-1]
          Length = 217

 Score = 87.3 bits (216), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 29/110 (26%), Positives = 48/110 (43%), Gaps = 9/110 (8%)

Query: 9   SCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNREL--------KDVTAHAEILAI 59
               E+A N+      P+GA     N  +IS   N+  E          +  AHAEI AI
Sbjct: 10  KECFEQAWNSYCSGSFPIGAAITDENGDVISIGRNKVYEKVIEEGQVCNNKIAHAEINAI 69

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109
                + +     +  +Y T+EPC +C  AI ++ I+ +++ A +   G 
Sbjct: 70  LKINNLETNTNRKKYSIYSTMEPCALCFGAIVMSSIKNVHFAAGDGLAGA 119


>gi|241204003|ref|YP_002975099.1| riboflavin biosynthesis protein RibD [Rhizobium leguminosarum bv.
           trifolii WSM1325]
 gi|240857893|gb|ACS55560.1| riboflavin biosynthesis protein RibD [Rhizobium leguminosarum bv.
           trifolii WSM1325]
          Length = 438

 Score = 87.3 bits (216), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 29/141 (20%), Positives = 45/141 (31%), Gaps = 21/141 (14%)

Query: 4   GNVFMSCALEEAQ--NAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
              FM+ A+  ++           VG + V    I+ RA            HAE  A+  
Sbjct: 7   DERFMAAAIRLSRWHLGRTATNPSVGCLIVRGGVIVGRA----VTALGGRPHAETQALAE 62

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
              +           YVTLEPC        C+ A+    + R+    ++P       G  
Sbjct: 63  AGALA-----RGATAYVTLEPCSHHGKTPPCSQALIAYGVARVVISVTDPDPRVSGRGIA 117

Query: 116 FYTLATCHHSPEIYPGISEQR 136
               A      E+  G+ E  
Sbjct: 118 MLREAG----IEVDTGVLEAE 134


>gi|239982837|ref|ZP_04705361.1| hypothetical protein SalbJ_25624 [Streptomyces albus J1074]
          Length = 166

 Score = 87.3 bits (216), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 31/127 (24%), Positives = 48/127 (37%), Gaps = 3/127 (2%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +   +E A  A    + P G+V V  +  + +   NR     D T H E    R     L
Sbjct: 13  LRRCVELAAQALDAGDEPFGSVLVDGDGTVRAEDRNRV-ASGDSTRHPEFALARWAAENL 71

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH-HS 125
           +        +Y + E C MCAAA +   + R+ Y AS+ +  G  N              
Sbjct: 72  TVAERAAATVYTSGEHCPMCAAAHAWVGLGRIVYAASSEQLTGWLNEWGVPASPVAPLPV 131

Query: 126 PEIYPGI 132
             + PG+
Sbjct: 132 AAVAPGV 138


>gi|324528898|gb|ADY48965.1| tRNA-specific adenosine deaminase 2 [Ascaris suum]
          Length = 134

 Score = 86.9 bits (215), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 28/92 (30%), Positives = 53/92 (57%), Gaps = 4/92 (4%)

Query: 59  IRMGC---RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
           +   C       +EIL E  LYVT+EPC MCA A+   +++R+ YGA+N + GG+ +   
Sbjct: 7   LEQWCLQTNQHIKEILKETTLYVTIEPCIMCACALYYLKLKRIVYGAANERFGGLGSVAN 66

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
              + +  H  +I   + ++R+ ++++DF+ +
Sbjct: 67  R-EMYSSKHLIQIDANVDKERAVKMLKDFYDQ 97


>gi|300022486|ref|YP_003755097.1| riboflavin biosynthesis protein RibD [Hyphomicrobium denitrificans
           ATCC 51888]
 gi|299524307|gb|ADJ22776.1| riboflavin biosynthesis protein RibD [Hyphomicrobium denitrificans
           ATCC 51888]
          Length = 368

 Score = 86.9 bits (215), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 36/148 (24%), Positives = 53/148 (35%), Gaps = 25/148 (16%)

Query: 4   GNVFMSCALEEAQNAALRNEIP---VGAVAVLN--NKIISRAGNRNRELKDVTAHAEILA 58
               M+ AL  A+       +P   VGAV       +I++R             HAE  A
Sbjct: 10  DEEMMAIALRMAERGLGAT-MPNPSVGAVIADETTGEILARG----VTAPGGRPHAETQA 64

Query: 59  IRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIEN 112
           I         + +    +YVTLEPC+       CA AI  A ++R      +P       
Sbjct: 65  IAAAG-----DRVRGATIYVTLEPCSHHGRTGPCAEAIVAAGLKRAVVAIEDPDPRVSGR 119

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQI 140
           G      A      E+  G+    +R+I
Sbjct: 120 GLDKLRDAGL----EVVRGVGAAEARRI 143


>gi|90023098|ref|YP_528925.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Saccharophagus degradans 2-40]
 gi|89952698|gb|ABD82713.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Saccharophagus degradans 2-40]
          Length = 365

 Score = 86.9 bits (215), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 34/155 (21%), Positives = 53/155 (34%), Gaps = 22/155 (14%)

Query: 4   GNVFMSCALEEAQNA-ALRNEIP-VGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIR 60
              FM+ A++ A+         P VG V V   N I+    +          HAE+    
Sbjct: 8   DQRFMTRAMQLAREGTYTTTPNPRVGCVLVDAANNIVGEGYHVRAGEG----HAEVN--- 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGT 114
                 +         YVTLEPC+       C  A+  A + R+ YG  +P       G 
Sbjct: 61  --AIADAGAAARGTTAYVTLEPCSHTGKTGPCCEALVAAGVSRVVYGMEDPNPKVAGRGL 118

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
                A      ++   + E  + ++   F K  R
Sbjct: 119 DHLEAAG----IQVDGPVLEYDAYELNPGFIKRMR 149


>gi|322696336|gb|EFY88130.1| CMP/dCMP deaminase, zinc-binding protein [Metarhizium acridum CQMa
           102]
          Length = 474

 Score = 86.9 bits (215), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 21/56 (37%), Positives = 30/56 (53%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
              F+  AL+ A+ A   NE PVG V V N  +I++  N     ++ T HAE +AI
Sbjct: 153 HLRFIEEALDMARLALRTNETPVGCVLVHNGTVIAKGMNATNVTRNGTRHAEFMAI 208



 Score = 68.8 bits (168), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 29/123 (23%), Positives = 47/123 (38%), Gaps = 40/123 (32%)

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL--- 119
              +S+EI+ E  LYVT+EPC MCA+ +    I+++Y+GA N K GG       +     
Sbjct: 274 GDSVSREIIRECILYVTVEPCVMCASLLRQLGIKKVYFGAVNDKFGGTGGVFSIHANSLP 333

Query: 120 -------ATCHHSP------------------------------EIYPGISEQRSRQIIQ 142
                  A+ H +P                              EI  G     +  +++
Sbjct: 334 VREDGQTASAHPTPRPSQLPDGSGTLGTSYPPGGGDGGNVEEGYEIEGGWGRDEAVGLLR 393

Query: 143 DFF 145
            F+
Sbjct: 394 RFY 396


>gi|213972523|ref|NP_001135424.1| adenosine deaminase, tRNA-specific 3, TAD3 homolog [Nasonia
           vitripennis]
          Length = 367

 Score = 86.9 bits (215), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 16/79 (20%), Positives = 41/79 (51%)

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
             +  +      ++  EPC++CA A+  +R+ R++YGA+NPK G + +    +++   +H
Sbjct: 283 KCAPYLCTGYWAFLLQEPCSLCAMALLHSRVSRIFYGATNPKTGILGSRATLHSVPGLNH 342

Query: 125 SPEIYPGISEQRSRQIIQD 143
             +++  +      + ++ 
Sbjct: 343 RYQVWSELLRDECEETLKA 361


>gi|225077298|ref|ZP_03720497.1| hypothetical protein NEIFLAOT_02357 [Neisseria flavescens
           NRL30031/H210]
 gi|224951442|gb|EEG32651.1| hypothetical protein NEIFLAOT_02357 [Neisseria flavescens
           NRL30031/H210]
          Length = 370

 Score = 86.9 bits (215), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 34/149 (22%), Positives = 54/149 (36%), Gaps = 21/149 (14%)

Query: 4   GNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
               M  ALE A+      +  P VG V     +I+ +  +          HAE+ A+R 
Sbjct: 6   DTQMMQTALELAKLGRFSTSPNPRVGCVIAHGAQIVGQGFHVKAGE----PHAEVHALRQ 61

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
                          YVTLEPC        CA A+  + + R+    ++P       G  
Sbjct: 62  AGAAAKGAT-----AYVTLEPCSHYGRTPPCAEALVHSGVTRVVAAMTDPNPLVAGKGLS 116

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDF 144
               A      E   G+ E ++R++ + F
Sbjct: 117 MLEAAGI--RTE--SGLLEAQARELNRGF 141


>gi|281212623|gb|EFA86783.1| hypothetical protein PPL_00588 [Polysphondylium pallidum PN500]
          Length = 217

 Score = 86.9 bits (215), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 35/146 (23%), Positives = 55/146 (37%), Gaps = 18/146 (12%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIIS-RAGNRNRELKDVTAHAEILAIR 60
           K    +M  A + A     +N +    V V  N  ++    N+N        H E++AI 
Sbjct: 44  KYHEKYMQIAYDLA---IEKNNL-FTTVIVAPNGTVACTGLNQNE--NSAIYHGEMVAIM 97

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS------NPKGGGIENGT 114
              RI ++       LY T E C MC AA   A   ++ YG S      +   G I   +
Sbjct: 98  NCSRIHNKNTWEGYSLYTTGESCVMCHAAAMWAGFSKVIYGTSIQTMYCDKCLGQIPVLS 157

Query: 115 Q-----FYTLATCHHSPEIYPGISEQ 135
                  Y L+  +   ++  GI  +
Sbjct: 158 NQINALAYGLSGNNSPAQVIGGILRK 183


>gi|241759512|ref|ZP_04757616.1| riboflavin biosynthesis protein RibD [Neisseria flavescens SK114]
 gi|241320294|gb|EER56627.1| riboflavin biosynthesis protein RibD [Neisseria flavescens SK114]
          Length = 367

 Score = 86.9 bits (215), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 34/149 (22%), Positives = 56/149 (37%), Gaps = 21/149 (14%)

Query: 4   GNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
               M  ALE A+      +  P VG V     +I+ +  +   +  +   HAE+ A+R 
Sbjct: 6   DTQMMQTALELAKLGRFSTSPNPRVGCVIAHGAQIVGQGFH--VKAGEP--HAEVHALRQ 61

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
                          YVTLEPC        CA A+  + + R+    ++P       G  
Sbjct: 62  AGAAAKGAT-----AYVTLEPCSHYGRTPPCAEALVHSGVTRVVAAMTDPNPLVAGKGLS 116

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDF 144
               A      E   G+ E ++R++ + F
Sbjct: 117 MLEAAGI--RTE--SGLLEAQARELNRGF 141


>gi|242764976|ref|XP_002340880.1| cytosine deaminase, putative [Talaromyces stipitatus ATCC 10500]
 gi|218724076|gb|EED23493.1| cytosine deaminase, putative [Talaromyces stipitatus ATCC 10500]
          Length = 154

 Score = 86.9 bits (215), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 25/99 (25%), Positives = 45/99 (45%), Gaps = 1/99 (1%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRM 61
               ++   ++ A+ A    + P G++ V    +I+  A NR    +D+T H E   +  
Sbjct: 5   SDINYLRRCVDLAREAVDAGDAPFGSILVNAAGEILQEARNRVTTEEDITLHPEFTLVIW 64

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
             + LS        +Y + E C MCA+A + A + R+ Y
Sbjct: 65  AQKHLSPTERATTTVYTSGEHCPMCASAHAYADLGRIVY 103


>gi|284043910|ref|YP_003394250.1| CMP/dCMP deaminase zinc-binding protein [Conexibacter woesei DSM
           14684]
 gi|283948131|gb|ADB50875.1| CMP/dCMP deaminase zinc-binding protein [Conexibacter woesei DSM
           14684]
          Length = 195

 Score = 86.9 bits (215), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 29/97 (29%), Positives = 40/97 (41%), Gaps = 2/97 (2%)

Query: 14  EAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTA-HAEILAIRMG-CRILSQEIL 71
            A  A       VGAV V + ++++   NR  E    T  HAE  A+     R       
Sbjct: 43  LALEAMEAGNYGVGAVLVRDGEVVAEGRNRLLEPYVRTDCHAETEAVDQFEARFRDFPDA 102

Query: 72  PEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGG 108
               L+ +LE C MC   +    IR +YY A +  GG
Sbjct: 103 TGTVLWTSLECCPMCTVRLINTGIREVYYAAPDADGG 139


>gi|54026442|ref|YP_120684.1| putative deaminase [Nocardia farcinica IFM 10152]
 gi|54017950|dbj|BAD59320.1| putative deaminase [Nocardia farcinica IFM 10152]
          Length = 169

 Score = 86.9 bits (215), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 27/103 (26%), Positives = 41/103 (39%), Gaps = 2/103 (1%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIR 60
           +     +   +E A+ A    + P G+V V    ++   A N      D T H E    R
Sbjct: 12  EADRAHLRRCVELARAALAEGDEPFGSVLVDGAGEVRFEARNA-IVSGDPTRHPEFEIAR 70

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
                LS        +Y + E C MC+AA + A + R+ Y  S
Sbjct: 71  WAGTHLSSAERAASTVYTSGEHCPMCSAAHAWAGLGRIVYAVS 113


>gi|66815967|ref|XP_642000.1| cytidine deaminase-like protein [Dictyostelium discoideum AX4]
 gi|60470041|gb|EAL68022.1| cytidine deaminase-like protein [Dictyostelium discoideum AX4]
          Length = 519

 Score = 86.9 bits (215), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 22/76 (28%), Positives = 44/76 (57%), Gaps = 1/76 (1%)

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           L Q +     L++T EPC MC+ A+  +R++R+ YG+S+ + GG+ +  + +T  + +H 
Sbjct: 439 LGQYLATNFHLFITKEPCIMCSMALVHSRVKRVVYGSSS-RDGGLGSYLKIHTEKSLNHR 497

Query: 126 PEIYPGISEQRSRQII 141
            E+Y    E   +++ 
Sbjct: 498 FEVYKDFMEDECKKLF 513



 Score = 41.4 bits (97), Expect = 0.038,   Method: Composition-based stats.
 Identities = 14/48 (29%), Positives = 26/48 (54%), Gaps = 5/48 (10%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLN--NKIISRAGNRNRE 46
           M+K   +MS A+E+A+    R    +GAV +    NKI++ + ++   
Sbjct: 293 MRK---YMSLAIEQAEIGKKRGHKGIGAVLIDPNTNKIVATSYDQTNR 337


>gi|261393155|emb|CAX50767.1| riboflavin biosynthesis protein RibD [includes:
           diaminohydroxyphosphoribosylaminopyrimidine deaminase
           (riboflavin-specific deaminase) and
           5-amino-6-(5-phosphoribosylamino)uracil reductase (HTP
           reductase)] [Neisseria meningitidis 8013]
          Length = 369

 Score = 86.9 bits (215), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 34/159 (21%), Positives = 58/159 (36%), Gaps = 24/159 (15%)

Query: 2   KKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
           +     M  AL+ A       +  P VG V    ++I+ +  +          HAE+ A+
Sbjct: 4   ETDISMMQNALKLAALGRFSTSPNPRVGCVIAHGSQIVGQGFHVKAGE----PHAEVHAL 59

Query: 60  RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113
           R    +           +VTLEPC        CA A+  + + R+     +P       G
Sbjct: 60  RQAGEMAQ-----GATAFVTLEPCSHYGRTPPCAEALLRSGVTRVVAAMRDPNPLVAGKG 114

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDF---FKERR 149
                 A      E   G+ E ++R++ + F    + RR
Sbjct: 115 LALLEAAGI--KTEC--GLLEHQARELNRGFLSRIERRR 149


>gi|224130250|ref|XP_002320789.1| predicted protein [Populus trichocarpa]
 gi|222861562|gb|EEE99104.1| predicted protein [Populus trichocarpa]
          Length = 199

 Score = 86.9 bits (215), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 32/151 (21%), Positives = 55/151 (36%), Gaps = 33/151 (21%)

Query: 2   KKGNVFMSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
           K    +M   +E A+ A       P VG V V   +                 HAE+ A+
Sbjct: 29  KDDGFYMRRCVELARKAIGCTSPSPMVGCVIVKAGQ----------------PHAEVFAL 72

Query: 60  RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113
           R    +           YV+LEPC        C+  +  A+++ +  G  +P       G
Sbjct: 73  RDAGDVAEN-----ATAYVSLEPCNHYGRTPPCSEVMVKAKLKEVVIGMIDPNPIVATRG 127

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
            Q    A      ++  G+ E+  +++I+ F
Sbjct: 128 VQRLRDAG----IDVVVGVEEELCKRLIEAF 154


>gi|291302009|ref|YP_003513287.1| CMP/dCMP deaminase zinc-binding protein [Stackebrandtia nassauensis
           DSM 44728]
 gi|290571229|gb|ADD44194.1| CMP/dCMP deaminase zinc-binding protein [Stackebrandtia nassauensis
           DSM 44728]
          Length = 419

 Score = 86.9 bits (215), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 29/131 (22%), Positives = 45/131 (34%), Gaps = 26/131 (19%)

Query: 4   GNVFMSCALEEAQN------AALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57
              ++  A+  A        A       VGAV V + ++++   +R  +  D   HAE  
Sbjct: 3   DEHWLRQAIALAAKCPPSDTAFS-----VGAVIVADGRVLATGYSRETDPHD---HAE-- 52

Query: 58  AIRMGCRILSQEILPEVDLYVTLEPC-------TMCAAAISLARIRRLYYGASNPKGGGI 110
                      + L    +Y +LEPC         CA  I  AR+ R+ Y    P     
Sbjct: 53  ---EAALSKLDQDLSGATVYSSLEPCGQRASRPVSCAELIIAARVPRVVYAWREPDTFVQ 109

Query: 111 ENGTQFYTLAT 121
             G +    A 
Sbjct: 110 PKGLRLLAEAR 120


>gi|255602376|ref|XP_002537841.1| riboflavin-specific deaminase, putative [Ricinus communis]
 gi|223514866|gb|EEF24541.1| riboflavin-specific deaminase, putative [Ricinus communis]
          Length = 110

 Score = 86.9 bits (215), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 29/114 (25%), Positives = 42/114 (36%), Gaps = 19/114 (16%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
            +   +M+ AL  A         P   VG V V N +++    +          HAE+ A
Sbjct: 5   SQDIEWMTRALRLAARGLYTT-TPNPRVGCVIVKNGQLVGEGAHLKAGE----PHAEVHA 59

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPK 106
           +R        E       YVTLEPC        CA A+  A + R+     +P 
Sbjct: 60  LRAAG-----EQARGATAYVTLEPCSHFGRTPPCADALVNAGVSRVVVAMQDPN 108


>gi|254787858|ref|YP_003075287.1| cytosine deaminase [Teredinibacter turnerae T7901]
 gi|237685613|gb|ACR12877.1| cytosine deaminase [Teredinibacter turnerae T7901]
          Length = 153

 Score = 86.9 bits (215), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 41/123 (33%), Gaps = 9/123 (7%)

Query: 12  LEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEIL 71
            ++A  +     +P+GA  +   ++++   N   +      H E   I            
Sbjct: 14  YQQALKSFHEGGVPIGACIMQAGQVVAVGHNHRIQCGSNIRHGETDCIEKCG---HTVDF 70

Query: 72  PEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT-----CHHSP 126
            +V L+ +L PC MC  AI L  I R+     N      E                +H P
Sbjct: 71  SQVTLFSSLTPCLMCTGAIILYSIPRVVI-LDNINIHDYETNLDMLRERNVEVKILNHEP 129

Query: 127 EIY 129
            I 
Sbjct: 130 SIE 132


>gi|291454680|ref|ZP_06594070.1| conserved hypothetical protein [Streptomyces albus J1074]
 gi|291357629|gb|EFE84531.1| conserved hypothetical protein [Streptomyces albus J1074]
          Length = 163

 Score = 86.9 bits (215), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 31/127 (24%), Positives = 48/127 (37%), Gaps = 3/127 (2%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +   +E A  A    + P G+V V  +  + +   NR     D T H E    R     L
Sbjct: 10  LRRCVELAAQALDAGDEPFGSVLVDGDGTVRAEDRNRV-ASGDSTRHPEFALARWAAENL 68

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH-HS 125
           +        +Y + E C MCAAA +   + R+ Y AS+ +  G  N              
Sbjct: 69  TVAERAAATVYTSGEHCPMCAAAHAWVGLGRIVYAASSEQLTGWLNEWGVPASPVAPLPV 128

Query: 126 PEIYPGI 132
             + PG+
Sbjct: 129 AAVAPGV 135


>gi|120404037|ref|YP_953866.1| CMP/dCMP deaminase [Mycobacterium vanbaalenii PYR-1]
 gi|119956855|gb|ABM13860.1| CMP/dCMP deaminase, zinc-binding protein [Mycobacterium vanbaalenii
           PYR-1]
          Length = 159

 Score = 86.5 bits (214), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 28/103 (27%), Positives = 41/103 (39%), Gaps = 2/103 (1%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIR 60
               VF+   +  A+ A    + P G++ V     +     NR  +  D T H E    R
Sbjct: 5   DDDLVFLRRCVSLARTALDGGDEPFGSLLVDHEGSVRFEDHNRV-KDGDATRHPEFAIAR 63

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
                LS        +Y + E C MCAAA +   + R+ Y AS
Sbjct: 64  WAVEHLSPAQRNRSTVYTSGEHCPMCAAAHAWVGLGRVVYAAS 106


>gi|239624923|ref|ZP_04667954.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
 gi|239521309|gb|EEQ61175.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
          Length = 161

 Score = 86.5 bits (214), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 27/106 (25%), Positives = 41/106 (38%), Gaps = 1/106 (0%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAI 59
            ++ + +       A+ A    +     V V     I+    N     KD TAH  +  +
Sbjct: 5   WREDDYYFERTEALAREAMKAGDDGFACVLVGPEGDILMEQKNEAGTQKDPTAHDVMALV 64

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNP 105
           R      S   L E  +Y  +EPC MC  A+  A+I R+ Y  S  
Sbjct: 65  RRAVHEYSPGQLQECTVYALMEPCVMCMGALFWAKIGRVKYAMSEE 110


>gi|325127564|gb|EGC50487.1| riboflavin biosynthesis protein RibD [Neisseria meningitidis N1568]
          Length = 369

 Score = 86.5 bits (214), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 35/159 (22%), Positives = 56/159 (35%), Gaps = 24/159 (15%)

Query: 2   KKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
                 M  AL  A       +  P VG V    ++I+ +  +          HAE+ A+
Sbjct: 4   DTDISMMENALRLAALGRFSTSPNPRVGCVIAHGSQIVGQGFHVKAGE----PHAEVHAL 59

Query: 60  RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113
           R    +           +VTLEPC        CA A+  A + R+     +P       G
Sbjct: 60  RQAGEMAQ-----GATAFVTLEPCSHYGRTPPCAEALVRAGVSRVVAAMRDPNPLVAGKG 114

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDF---FKERR 149
                 A      E   G+ E ++R++ + F    + RR
Sbjct: 115 LALLEAAGI--KTEC--GLLEHQARELNRGFLSRIERRR 149


>gi|54296165|ref|YP_122534.1| hypothetical protein lpp0188 [Legionella pneumophila str. Paris]
 gi|53749950|emb|CAH11335.1| hypothetical protein lpp0188 [Legionella pneumophila str. Paris]
          Length = 153

 Score = 86.5 bits (214), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 36/149 (24%), Positives = 62/149 (41%), Gaps = 13/149 (8%)

Query: 1   MKKGNV-FMSCALEEAQNAALRNEIPVGAVAVLNN-KIISRAGNRNRELKDVTAHAEILA 58
           M K    FM+  +E A    +    P GA+ V ++ +I+ ++ N      +   H E+  
Sbjct: 1   MDKYIYDFMAATIEVAATNPMA---PYGAIIVYDDKEILLKSVN--NAHNNPLMHGELSV 55

Query: 59  IRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS----NPKGGGIENGT 114
           I           +  + LY T EPC MCAAAI  A I ++ YG+S    +   G      
Sbjct: 56  IHRLFENGFDGDVSRLSLYTTAEPCPMCAAAIYWAMIPKVVYGSSISFLHELFGRQIQVD 115

Query: 115 --QFYTLATCHHSPEIYPGISEQRSRQII 141
             +  +     +  ++  G+ E+   Q+ 
Sbjct: 116 AKEILSKTPNFYECQLLGGVMEKNCNQLF 144


>gi|194290427|ref|YP_002006334.1| bifunctional: diaminohydroxyphosphoribosylaminopyrimidine deaminase
           (n-terminal); 5-amino-6-(5-phosphoribosylamino) uracil
           reductase [Cupriavidus taiwanensis LMG 19424]
 gi|193224262|emb|CAQ70271.1| bifunctional: diaminohydroxyphosphoribosylaminopyrimidine deaminase
           (N-terminal); 5-amino-6-(5-phosphoribosylamino) uracil
           reductase [Cupriavidus taiwanensis LMG 19424]
          Length = 371

 Score = 86.5 bits (214), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 29/125 (23%), Positives = 47/125 (37%), Gaps = 16/125 (12%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC-- 83
           VG V + + ++I +   +         HAEI A++                YVTLEPC  
Sbjct: 30  VGCVLIKDGQVIGQGFTQPAGQD----HAEIQAMKDALSRGLDP--AGATAYVTLEPCSH 83

Query: 84  ----TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139
                 CA A+  A + R+     +P       G Q    A      ++  G+ E+ +R 
Sbjct: 84  FGRTPPCADALVRAGVARVVAAMEDPNPSVSGRGLQRLRDAG----IDVRCGLLEKEARD 139

Query: 140 IIQDF 144
           +   F
Sbjct: 140 LNIGF 144


>gi|325924396|ref|ZP_08185931.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Xanthomonas
           gardneri ATCC 19865]
 gi|325545120|gb|EGD16439.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Xanthomonas
           gardneri ATCC 19865]
          Length = 364

 Score = 86.5 bits (214), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 35/150 (23%), Positives = 56/150 (37%), Gaps = 21/150 (14%)

Query: 3   KGNVFMSCALEEAQN-AALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
             +  M+ AL  A+  A      P VG V V +   +    ++        AHAE+    
Sbjct: 6   DDHRCMAQALRLAERGAYTTRPNPMVGCVIVRDGVCVGEGFHQRAGG----AHAEVF--- 58

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
                 +  +      YVTLEPC        CA A+  A +RR+    ++P       G 
Sbjct: 59  --ALRAAGALARGATAYVTLEPCAHYGRTPPCALALIEAGVRRVVAAMADPFPQVNGGGF 116

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
                A      E+  G+ + ++R + Q F
Sbjct: 117 ALLREAG----IEVLSGVMQAQARVLNQGF 142


>gi|46138639|ref|XP_391010.1| hypothetical protein FG10834.1 [Gibberella zeae PH-1]
          Length = 173

 Score = 86.5 bits (214), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 28/106 (26%), Positives = 43/106 (40%), Gaps = 7/106 (6%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKD------VTAHA 54
           ++    +  A+  A  A    + P G+V V  +NK++    NR     D       T H 
Sbjct: 4   EQDREHLRLAVSLAHEALKAGDAPFGSVLVSSDNKVLQTDRNRTVTGSDGDSRPDATLHP 63

Query: 55  EILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
           E    R     LS E      +Y + E C MC+AA +   + R+ Y
Sbjct: 64  EFTLARWAQLNLSAEERKNSTVYTSGEHCAMCSAAHAWCGLGRIVY 109


>gi|325983451|ref|YP_004295853.1| riboflavin biosynthesis protein RibD [Nitrosomonas sp. AL212]
 gi|325532970|gb|ADZ27691.1| riboflavin biosynthesis protein RibD [Nitrosomonas sp. AL212]
          Length = 366

 Score = 86.5 bits (214), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 34/153 (22%), Positives = 53/153 (34%), Gaps = 29/153 (18%)

Query: 4   GNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI-- 59
              FMS AL  A+         P VG V  L+++II    +   +      HAEI A+  
Sbjct: 6   DYAFMSYALRLAEKGLYSTTPNPRVGCVLTLDDRIIGSGWH--EKAGQP--HAEINALAS 61

Query: 60  --RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIE 111
                C             Y+TLEPC        C  A+  A I ++     +P      
Sbjct: 62  TSEAAC---------GATAYITLEPCSHYGRTPPCVYALIDAGITKVIIAMEDPNPMVSG 112

Query: 112 NGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
            G      A       +  G+ + +++ +   F
Sbjct: 113 RGCMLLEQAG----ITVQTGLLQVQAQALNIGF 141


>gi|15677653|ref|NP_274814.1| riboflavin biosynthesis protein RibD [Neisseria meningitidis MC58]
 gi|7227070|gb|AAF42152.1| riboflavin biosynthesis protein RibD [Neisseria meningitidis MC58]
 gi|325139638|gb|EGC62177.1| riboflavin biosynthesis protein RibD [Neisseria meningitidis CU385]
          Length = 369

 Score = 86.5 bits (214), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 35/159 (22%), Positives = 56/159 (35%), Gaps = 24/159 (15%)

Query: 2   KKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
                 M  AL  A       +  P VG V    ++I+ +  +          HAE+ A+
Sbjct: 4   DTDISMMENALRLAALGRFSTSPNPRVGCVIAHGSQIVGQGFHVKAGE----PHAEVHAL 59

Query: 60  RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113
           R    +           +VTLEPC        CA A+  A + R+     +P       G
Sbjct: 60  RQAGEMAQ-----GATAFVTLEPCSHYGRTPPCAEALVRAGVSRVVAAMRDPNPLVAGKG 114

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDF---FKERR 149
                 A      E   G+ E ++R++ + F    + RR
Sbjct: 115 LALLEAAGI--KTEC--GLLEHQARELNRGFLSRIERRR 149


>gi|85000845|ref|XP_955141.1| deaminase [Theileria annulata strain Ankara]
 gi|65303287|emb|CAI75665.1| deaminase, putative [Theileria annulata]
          Length = 297

 Score = 86.5 bits (214), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 28/119 (23%), Positives = 49/119 (41%), Gaps = 16/119 (13%)

Query: 28  AVAVLNNKIISRAGNRNRELKDVTAHAEILA---IRMGCRIL--------SQEILPEVDL 76
            +    +K+IS A ++     ++  HA ILA   I    +             +    D+
Sbjct: 180 CIITFKDKVISTAFDKR--DVNILKHASILAVGKIAEAKKKRETQKMKDFPDYLCTGCDV 237

Query: 77  YVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE---IYPGI 132
           Y++ EPC MC  A+  +RI ++ YG  N K G   +    + +   +H      + P I
Sbjct: 238 YLSHEPCCMCGMALLHSRISKVIYGIKNQKLGCFGSVWNLHNMIELNHHFRAFTVTPNI 296


>gi|325846504|ref|ZP_08169419.1| riboflavin biosynthesis protein RibD [Anaerococcus hydrogenalis
           ACS-025-V-Sch4]
 gi|325481262|gb|EGC84303.1| riboflavin biosynthesis protein RibD [Anaerococcus hydrogenalis
           ACS-025-V-Sch4]
          Length = 359

 Score = 86.5 bits (214), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 38/155 (24%), Positives = 59/155 (38%), Gaps = 31/155 (20%)

Query: 3   KGNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
               +M    + A+NA  R +    P VGAV V + KIIS   +          HAE+  
Sbjct: 2   NDKYYMKKCFDLAKNA--RGKTLKNPLVGAVLVKDGKIISTGYHHEYGK----VHAEVDC 55

Query: 59  IRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGA--SNPKGGGI 110
                    +E      LYV LEPC+       C   I    I+++      +NPK    
Sbjct: 56  FNNL-----KENADGAVLYVNLEPCSHYGKQGPCTLEIIKRNIKKVIISNIDTNPKV--- 107

Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
            +G +           E+  G+ E   +++ + FF
Sbjct: 108 -DGLKVLREKG----IEVQTGLLEDEGKKLNEKFF 137


>gi|73540480|ref|YP_295000.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase /
           diaminohydroxyphosphoribosylaminopyrimidine deaminase
           [Ralstonia eutropha JMP134]
 gi|72117893|gb|AAZ60156.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase /
           diaminohydroxyphosphoribosylaminopyrimidine deaminase
           [Ralstonia eutropha JMP134]
          Length = 371

 Score = 86.5 bits (214), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 32/125 (25%), Positives = 46/125 (36%), Gaps = 16/125 (12%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC-- 83
           VG V   N +II +   +         HAEI A++                YVTLEPC  
Sbjct: 30  VGCVLSKNGQIIGQGFTQPAGQD----HAEIQALKDAQTRGIDP--AGATAYVTLEPCSH 83

Query: 84  ----TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139
                 CA A+  A I R+     +P       G Q    A      ++  G+ E+ +R 
Sbjct: 84  FGRTPPCADALVRAGIARVVAAMEDPNPSVSGRGLQRLRDAG----IDVRCGLLEKEARD 139

Query: 140 IIQDF 144
           +   F
Sbjct: 140 LNIGF 144


>gi|115399304|ref|XP_001215241.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
 gi|114192124|gb|EAU33824.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
          Length = 165

 Score = 86.5 bits (214), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 28/107 (26%), Positives = 45/107 (42%), Gaps = 1/107 (0%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIR 60
                ++   +E A+ A    + P G+V V     I+    NR     DVT H E+    
Sbjct: 4   NTDITYLRRCVELAREALQAGDAPFGSVLVDAAGNILKEDRNRTVTDADVTLHPELTLAL 63

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKG 107
              + LSQ       +Y + E C MCAA  +   + R+ Y +S+ + 
Sbjct: 64  WAQKNLSQNERATATVYTSGEHCPMCAAVHANVGLGRIVYASSSAQF 110


>gi|121634268|ref|YP_974513.1| putative diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/phosphoribosylamino)uracil reductase
           [Neisseria meningitidis FAM18]
 gi|120865974|emb|CAM09711.1| putative diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/phosphoribosylamino)uracil reductase
           [Neisseria meningitidis FAM18]
 gi|254670038|emb|CBA04840.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Neisseria meningitidis alpha153]
 gi|325131464|gb|EGC54171.1| riboflavin biosynthesis protein RibD [Neisseria meningitidis M6190]
 gi|325137571|gb|EGC60152.1| riboflavin biosynthesis protein RibD [Neisseria meningitidis
           ES14902]
          Length = 369

 Score = 86.5 bits (214), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 34/159 (21%), Positives = 56/159 (35%), Gaps = 24/159 (15%)

Query: 2   KKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
                 M  AL  A       +  P VG V    ++I+ +  +          HAE+ A+
Sbjct: 4   DTDISMMETALRLAALGRFSTSPNPRVGCVIAHGSQIVGQGFHVKAGE----PHAEVHAL 59

Query: 60  RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113
           R    +           +VTLEPC        CA A+  + + R+     +P       G
Sbjct: 60  RQAGEMAQ-----GATAFVTLEPCSHYGRTPPCAEALLRSGVTRVVAAMRDPNPLVAGKG 114

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDF---FKERR 149
                 A      E   G+ E ++R++ + F    + RR
Sbjct: 115 LALLEAAGI--KTEC--GLLEHQARELNRGFLSRIERRR 149


>gi|261381200|ref|ZP_05985773.1| riboflavin biosynthesis protein RibD [Neisseria subflava NJ9703]
 gi|284795821|gb|EFC51168.1| riboflavin biosynthesis protein RibD [Neisseria subflava NJ9703]
          Length = 372

 Score = 86.1 bits (213), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 34/149 (22%), Positives = 56/149 (37%), Gaps = 21/149 (14%)

Query: 4   GNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
               M  ALE A+      +  P VG V     +I+ +  +   +  +   HAE+ A+R 
Sbjct: 6   DTQMMQTALELAKLGRFSTSPNPRVGCVIAHGAQIVGQGFH--VKAGEP--HAEVHALRQ 61

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
                          YVTLEPC        CA A+  + + R+    ++P       G  
Sbjct: 62  AGAAAKGAT-----AYVTLEPCSHYGRTPPCAEALVHSGVTRVVAAMTDPNPLVSGKGLS 116

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDF 144
               A      E   G+ E ++R++ + F
Sbjct: 117 MLEAAGI--RTE--SGLLEAQARELNRGF 141


>gi|71027665|ref|XP_763476.1| hypothetical protein [Theileria parva strain Muguga]
 gi|68350429|gb|EAN31193.1| hypothetical protein, conserved [Theileria parva]
          Length = 312

 Score = 86.1 bits (213), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 27/119 (22%), Positives = 48/119 (40%), Gaps = 16/119 (13%)

Query: 28  AVAVLNNKIISRAGNRNRELKDVTAHAEILA---IRMGCRI--------LSQEILPEVDL 76
            +    +K+IS A   +    ++  HA ILA   I    +             +    ++
Sbjct: 180 CIITFKDKVISTAF--DERDVNILKHASILAVNKIAEAKKKRETQKIKDYPDYLCTGCEV 237

Query: 77  YVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE---IYPGI 132
           Y++ EPC MC  A+  +RI ++ YG  N K G   +    + +   +H      + P I
Sbjct: 238 YLSHEPCCMCGMALLHSRISKVIYGIKNHKLGCFGSVWNLHNMIELNHRFRAFTVTPNI 296


>gi|328886795|emb|CCA60034.1| cytidine or deoxycytidine deaminase [Streptomyces venezuelae ATCC
           10712]
          Length = 145

 Score = 86.1 bits (213), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 28/101 (27%), Positives = 44/101 (43%), Gaps = 1/101 (0%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
               +  A+  A  A    + P G++    +  +++ A N  R   D+TAH E+   R  
Sbjct: 6   DETLLRRAVGIAARAVTLGDAPYGSLLAGPDGTVLAEAHNTVRRDNDITAHPELKLARWA 65

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
            R L+ E      LY + +PC MC   I  + I R+ Y  S
Sbjct: 66  ARELAPETAAGTTLYTSCQPCGMCGGGIIRSGIGRVVYALS 106


>gi|91788744|ref|YP_549696.1| 5-amino-6-(5-phosphoribosylamino)uracil
           reductase/diaminohydroxyphosphoribosylaminopyrimidine
           deaminase [Polaromonas sp. JS666]
 gi|91697969|gb|ABE44798.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Polaromonas sp.
           JS666]
          Length = 373

 Score = 86.1 bits (213), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 41/157 (26%), Positives = 65/157 (41%), Gaps = 20/157 (12%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEI-P-VGAVAV--LNNKIISRAGNRNRELKDVTAHAEI 56
           MK    F+  ALE A++A  R+E  P VG V     + +++     +        AHAEI
Sbjct: 1   MKPPPPFIDQALELARHAVGRSEPNPRVGCVIASADDQRVLGTGDTQAVGG----AHAEI 56

Query: 57  LAIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGI 110
           +A+R         ++     YVTLEPC+       C  A+  A I+++    ++P     
Sbjct: 57  MALRDAAARRH--VVAGATAYVTLEPCSHHGRTGPCCDALIAAGIKKVVASIADPNPLVS 114

Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
             G +    A      E+  G     SR++   FF  
Sbjct: 115 GQGFERMRAAG----IEVVVGPGAAESRELNIGFFSR 147


>gi|75675917|ref|YP_318338.1| riboflavin biosynthesis protein RibD [Nitrobacter winogradskyi
           Nb-255]
 gi|74420787|gb|ABA04986.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Nitrobacter
           winogradskyi Nb-255]
          Length = 387

 Score = 86.1 bits (213), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 32/110 (29%), Positives = 40/110 (36%), Gaps = 17/110 (15%)

Query: 4   GNVFMSCALEEAQN--AALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
              FM  AL   +    A      VGAV V +  I+ R   +         HAE  A+R 
Sbjct: 21  DLHFMQLALALGRRSLGASAPNPAVGAVIVKDGVIVGRGWTQPGGR----PHAEAEALRR 76

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNP 105
                         LYVTLEPC        CA A+  A I R+     +P
Sbjct: 77  AGEAA-----RGATLYVTLEPCSHVGKTPPCADAVIAAGITRVVSAIEDP 121


>gi|163742965|ref|ZP_02150348.1| riboflavin biosynthesis protein RibD [Phaeobacter gallaeciensis
           2.10]
 gi|161383648|gb|EDQ08034.1| riboflavin biosynthesis protein RibD [Phaeobacter gallaeciensis
           2.10]
          Length = 372

 Score = 86.1 bits (213), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 31/151 (20%), Positives = 49/151 (32%), Gaps = 21/151 (13%)

Query: 3   KGNVFMSCALEEAQNAALR--NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +   FMS AL   +           VG V V + +I+ R   +         HAE  A++
Sbjct: 10  EDARFMSLALSLGRRGLGNCWPNPAVGCVIVRDGRIVGRGWTQPGGR----PHAEPQALQ 65

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
               +          +YV+LEPC        CA A+  A   R+     +       +G 
Sbjct: 66  QAGDLA-----RGATVYVSLEPCSHTGKTPPCAQALINAGAARVVAAIEDSDPRVSGHGF 120

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
                A       +  G+    +      FF
Sbjct: 121 AMLRDAGIP----VTTGVCSDVAAWDHAGFF 147


>gi|322834072|ref|YP_004214099.1| riboflavin biosynthesis protein RibD [Rahnella sp. Y9602]
 gi|321169273|gb|ADW74972.1| riboflavin biosynthesis protein RibD [Rahnella sp. Y9602]
          Length = 378

 Score = 86.1 bits (213), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 36/155 (23%), Positives = 54/155 (34%), Gaps = 21/155 (13%)

Query: 3   KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
               +M+ A E A+         P VG V VLN +I+    +          HAE+ A+R
Sbjct: 12  TDEHYMARAFELARRGRFTTTPNPNVGCVIVLNGEIVGEGYHLRAGE----PHAEVHALR 67

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           M               YVTLEPC        CA A+  A + R+     +P       G 
Sbjct: 68  MAGEKA-----KGATAYVTLEPCSHHGRTPPCADALLAAGVARVVAAMQDPNPEVAGRGL 122

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
                       ++  G+   ++  +   F K  R
Sbjct: 123 YRLKQNG----VDVSHGLMHPQAEAVNLGFLKRMR 153


>gi|325676735|ref|ZP_08156408.1| cytidine/deoxycytidylate deaminase [Rhodococcus equi ATCC 33707]
 gi|325552283|gb|EGD21972.1| cytidine/deoxycytidylate deaminase [Rhodococcus equi ATCC 33707]
          Length = 172

 Score = 86.1 bits (213), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 29/97 (29%), Positives = 41/97 (42%), Gaps = 2/97 (2%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +   +E A  A L  + P G+V    +   ++   NR     D T H E    R     L
Sbjct: 24  LQRCVELAAEALLAGDEPFGSVLATADGTAVAEDRNR-IADGDSTRHPEFELARWAAENL 82

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
           S E      +Y + E C MCAAA +   + R+ Y AS
Sbjct: 83  SAEERAGATVYTSGEHCPMCAAAHAWVGLGRIVYVAS 119


>gi|312139813|ref|YP_004007149.1| cytidine/deoxycytidylate deaminase [Rhodococcus equi 103S]
 gi|311889152|emb|CBH48465.1| putative cytidine/deoxycytidylate deaminase [Rhodococcus equi 103S]
          Length = 166

 Score = 86.1 bits (213), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 29/97 (29%), Positives = 41/97 (42%), Gaps = 2/97 (2%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +   +E A  A L  + P G+V    +   ++   NR     D T H E    R     L
Sbjct: 18  LQRCVELAAEALLAGDEPFGSVLATADGTAVAEDRNR-IADGDSTRHPEFELARWAAENL 76

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
           S E      +Y + E C MCAAA +   + R+ Y AS
Sbjct: 77  SAEERAGATVYTSGEHCPMCAAAHAWVGLGRIVYVAS 113


>gi|299142094|ref|ZP_07035228.1| riboflavin biosynthesis protein RibD [Prevotella oris C735]
 gi|298576556|gb|EFI48428.1| riboflavin biosynthesis protein RibD [Prevotella oris C735]
          Length = 122

 Score = 86.1 bits (213), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 35/126 (27%), Positives = 51/126 (40%), Gaps = 13/126 (10%)

Query: 3   KGNVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +   +M   L+ A+N          VGAV V +++II    +          HAE+ A  
Sbjct: 2   EHEYYMKRCLQLAENGRQNAKPNPMVGAVIVAHDRIIGEGYHVRCGEG----HAEVNAF- 56

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
              R   +++LPE  +YV+LEPC        CA  I    I+R   G  +P       G 
Sbjct: 57  ASVRPEDEKLLPEATIYVSLEPCSHYGKTPPCADLIISKGIKRCVCGCVDPFAKVQGRGI 116

Query: 115 QFYTLA 120
           Q    A
Sbjct: 117 QRMRDA 122


>gi|260223441|emb|CBA34012.1| hypothetical protein Csp_B21900 [Curvibacter putative symbiont of
           Hydra magnipapillata]
          Length = 468

 Score = 86.1 bits (213), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 29/99 (29%), Positives = 41/99 (41%), Gaps = 7/99 (7%)

Query: 10  CALEEAQNAALRNEIPVGAVAVLNNK--IISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
            A   AQ A    + P GA+ V  +   +++  GN      D   HAE    R      +
Sbjct: 22  RANAVAQRALTLGKHPFGAILVAPDGETVLAEQGNV-----DTVNHAESALARTAATNFT 76

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPK 106
            E L +  L  T+EPC MCA     A I  L +G +  +
Sbjct: 77  PEYLWDCTLVTTVEPCAMCAGTQYWANIGTLVFGMTERR 115


>gi|308389915|gb|ADO32235.1| riboflavin biosynthesis protein RibD [Neisseria meningitidis
           alpha710]
 gi|325135601|gb|EGC58218.1| riboflavin biosynthesis protein RibD [Neisseria meningitidis M0579]
 gi|325207519|gb|ADZ02971.1| riboflavin biosynthesis protein RibD [Neisseria meningitidis
           NZ-05/33]
          Length = 369

 Score = 86.1 bits (213), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 34/159 (21%), Positives = 58/159 (36%), Gaps = 24/159 (15%)

Query: 2   KKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
           +     M  AL+ A       +  P VG V    ++I+ +  +          HAE+ A+
Sbjct: 4   ETDISMMQNALKLAALGRFSTSPNPRVGCVIAQGSQIVGQGFHVKAGE----PHAEVHAL 59

Query: 60  RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113
           R    +           +VTLEPC        CA A+  + + R+     +P       G
Sbjct: 60  RQAGEMAQ-----GATAFVTLEPCSHYGRTPPCAEALLRSGVTRVVAAMRDPNPLVAGKG 114

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDF---FKERR 149
                 A      E   G+ E ++R++ + F    + RR
Sbjct: 115 LALLEAAGI--KTEC--GLLEHQARELNRGFLSRIERRR 149


>gi|86137887|ref|ZP_01056463.1| riboflavin biosynthesis protein RibD [Roseobacter sp. MED193]
 gi|85825479|gb|EAQ45678.1| riboflavin biosynthesis protein RibD [Roseobacter sp. MED193]
          Length = 357

 Score = 86.1 bits (213), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 32/146 (21%), Positives = 50/146 (34%), Gaps = 21/146 (14%)

Query: 8   MSCALEEAQNAALR--NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M+ AL   +           VG V V   +I+ R   +         HAE+ A+    ++
Sbjct: 1   MALALSLGRRGQGNCWPNPAVGCVLVREGRIVGRGWTQPGGR----PHAEVAALAQAGKL 56

Query: 66  LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
                      +VTLEPC        CA A+  A I RL     +        G +    
Sbjct: 57  A-----RGATAFVTLEPCSHHGKTPPCAQALIDAGIARLVAAVGDSDPRVSGQGFEMLRQ 111

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFF 145
           A      E+  G+  + + +    FF
Sbjct: 112 AG----IEVEVGVLSEEAARDHAGFF 133


>gi|296269350|ref|YP_003651982.1| riboflavin biosynthesis protein RibD [Thermobispora bispora DSM
           43833]
 gi|296092137|gb|ADG88089.1| riboflavin biosynthesis protein RibD [Thermobispora bispora DSM
           43833]
          Length = 362

 Score = 86.1 bits (213), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 35/162 (21%), Positives = 57/162 (35%), Gaps = 30/162 (18%)

Query: 2   KKGNVFMSCALEEAQNAALRNEI-P---VGAVAVLN-NKIISRAGNRNRELKDVTAHAEI 56
            + + +M  A+E A  A       P   VG V V    +I+    +          HAEI
Sbjct: 3   SRDDHYMRRAIELA--ARGHGGTSPNPVVGCVVVDPTGEIVGEGFHAYAGG----PHAEI 56

Query: 57  LAIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGI 110
           +A+R        E       YVTLEPC        C AA+  A + R+     +P     
Sbjct: 57  VALRQAG-----ERARGATAYVTLEPCDHTGRTGPCTAALLQAGVARVVVAVPDPNPVAA 111

Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF---KERR 149
                        H   +  G+    + ++ +++    + RR
Sbjct: 112 GGAETLLR-----HGVTVDVGVLAAEAERVNEEWLTYMRARR 148


>gi|213024170|ref|ZP_03338617.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp.
           enterica serovar Typhi str. 404ty]
          Length = 65

 Score = 86.1 bits (213), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 14/58 (24%), Positives = 24/58 (41%)

Query: 88  AAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
            A+  +RI R+ +GA + K G   +          +H  EI  G+       ++  FF
Sbjct: 1   GAMVHSRIGRVVFGARDAKTGAAGSLIDVLHHPGMNHRVEIIEGVLRDECATLLSVFF 58


>gi|254500590|ref|ZP_05112741.1| riboflavin biosynthesis protein RibD [Labrenzia alexandrii DFL-11]
 gi|222436661|gb|EEE43340.1| riboflavin biosynthesis protein RibD [Labrenzia alexandrii DFL-11]
          Length = 375

 Score = 86.1 bits (213), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 37/162 (22%), Positives = 61/162 (37%), Gaps = 27/162 (16%)

Query: 2   KKGNVFMSCALEEAQNAALR--NEIPVGAVAVLNN-----KIISRAGNRNRELKDVTAHA 54
           +  N FM+ A   A+    R      V A+ V  N      ++ R        +   AHA
Sbjct: 6   ETDNRFMAAAERLARRGLGRVWPNPAVAALIVQENSEGVPVLVGRG----VTSRPGMAHA 61

Query: 55  EILAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGG 108
           E+ A+     +           YVTLEPC        C+ A+  A + R+  G  +P   
Sbjct: 62  EVNALTQAGELA-----KGATCYVTLEPCSHYGRTPPCSLALIEAGVSRVVVGMMDPNPR 116

Query: 109 GIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF-FKERR 149
               G      A      E+  G+ E+  + + + F +++RR
Sbjct: 117 VSGRGVGMLQDAG----IELVTGVRERALKDLYRGFTYRQRR 154


>gi|148272143|ref|YP_001221704.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Clavibacter michiganensis subsp. michiganensis NCPPB
           382]
 gi|147830073|emb|CAN01002.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Clavibacter michiganensis subsp. michiganensis NCPPB
           382]
          Length = 356

 Score = 86.1 bits (213), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 36/143 (25%), Positives = 56/143 (39%), Gaps = 21/143 (14%)

Query: 8   MSCALEEAQNAALRNEIP-VGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M   LE A         P VG V +    ++I+   +R       +AHAE+ A+R     
Sbjct: 25  MRRGLELAAEGPAWGPNPRVGCVILDARGRVIAEGRHR----GAGSAHAEVDALRQ---- 76

Query: 66  LSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
           L           VTLEPC        CAAA+  A + R+ Y  ++P   G+E+      L
Sbjct: 77  LPAGAARGSTAVVTLEPCNHTGRTGPCAAALIEAGVARVAYAVADP---GVESSGGAARL 133

Query: 120 ATCHHSPEIYPGISEQRSRQIIQ 142
                  E+  G+    +   ++
Sbjct: 134 RAA--GIEVIDGVLADEAAAFLR 154


>gi|70728414|ref|YP_258163.1| riboflavin biosynthesis protein RibD [Pseudomonas fluorescens Pf-5]
 gi|68342713|gb|AAY90319.1| riboflavin biosynthesis protein RibD [Pseudomonas fluorescens Pf-5]
          Length = 368

 Score = 86.1 bits (213), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 28/151 (18%), Positives = 53/151 (35%), Gaps = 21/151 (13%)

Query: 2   KKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
           +     M  AL  A+         P VG V    ++++    +R         HAE+ A+
Sbjct: 6   EVDFQHMQHALSLAERGSHSTWPNPRVGCVIAHGSQVVGEGWHRRAGG----PHAEVFAL 61

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENG 113
           R    +           YVT+EPC+       C  A+  + +  +     +P       G
Sbjct: 62  RQAGGLA-----RGATAYVTMEPCSHVGRTGACHQALIDSGVHSVVVAHQDPFEQVNGQG 116

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
                    +   E+  G+ E  ++++ + F
Sbjct: 117 IAQLR----NAGIEVRVGLLESAAQELNRGF 143


>gi|330443905|ref|YP_004376891.1| riboflavin biosynthesis protein RibD [Chlamydophila pecorum E58]
 gi|328807015|gb|AEB41188.1| riboflavin biosynthesis protein RibD [Chlamydophila pecorum E58]
          Length = 372

 Score = 86.1 bits (213), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 34/151 (22%), Positives = 59/151 (39%), Gaps = 25/151 (16%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIP----VGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57
           ++  +FM  A+E  +   +    P    VG V V N KI+S   +          HAE +
Sbjct: 6   EQQQLFMRRAIEIGERGRIT--TPPNPWVGCVLVKNGKILSEGYH--EYPGGP--HAEEI 59

Query: 58  AIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIE 111
           AIR          L    +Y++LEPC        C   +   R+  ++    +P      
Sbjct: 60  AIRKA-----HVSLEGAQVYLSLEPCSHYGKQPPCTDLLIKHRVAEVFIALKDPDCRVSG 114

Query: 112 NGTQFYTLATCHHSPEIYPGISEQRSRQIIQ 142
            G +       +    ++ G+ E R+R+ +Q
Sbjct: 115 KGIESLK----NVGIRVHVGLEEARARKSLQ 141


>gi|190572874|ref|YP_001970719.1| putative nucleotide deaminase [Stenotrophomonas maltophilia K279a]
 gi|254523836|ref|ZP_05135891.1| CMP/dCMP deaminase, zinc-binding protein [Stenotrophomonas sp.
           SKA14]
 gi|190010796|emb|CAQ44405.1| putative nucleotide deaminase [Stenotrophomonas maltophilia K279a]
 gi|219721427|gb|EED39952.1| CMP/dCMP deaminase, zinc-binding protein [Stenotrophomonas sp.
           SKA14]
          Length = 186

 Score = 86.1 bits (213), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 35/149 (23%), Positives = 59/149 (39%), Gaps = 17/149 (11%)

Query: 10  CALEEAQNAALRN-EIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
            A+E ++         P GAV    ++K+I+   NR        AHAE +A  +  + L 
Sbjct: 33  LAIELSRLNVEHASGGPFGAVVFGPDDKVIAAGVNRVMPHATSLAHAENMAYMLAQQRLQ 92

Query: 68  QEILPEV----DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA--- 120
              L  V     L  + +PC  C  A   A I RL  GA++     +E  T F       
Sbjct: 93  TPRLNAVLSPVTLATSSQPCCQCYGATVWAGIDRLLIGANSAD---VEELTPFDEGPLPA 149

Query: 121 ----TCHHS-PEIYPGISEQRSRQIIQDF 144
                 +    E+  G++   +R +++ +
Sbjct: 150 DWVGELNKRGIEVVQGLNRDAARSVLRAY 178


>gi|58271532|ref|XP_572922.1| hypothetical protein [Cryptococcus neoformans var. neoformans
           JEC21]
 gi|134115302|ref|XP_773949.1| hypothetical protein CNBH4010 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|50256577|gb|EAL19302.1| hypothetical protein CNBH4010 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|57229181|gb|AAW45615.1| expressed protein [Cryptococcus neoformans var. neoformans JEC21]
          Length = 224

 Score = 85.7 bits (212), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 34/127 (26%), Positives = 55/127 (43%), Gaps = 26/127 (20%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIP------VGAVAV--LNNKIISRAGNRNRELKDVTAH 53
           +    +M  ++E          +P       G+V V   NN+++    N   E+ D T H
Sbjct: 35  EVDLHWMRKSIEV---------MPPCHFNAYGSVIVNASNNELLCSGYNSQLEIGDPTEH 85

Query: 54  AEILAIRMGCRILS---------QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASN 104
            E+ AIR   +  +          EI P+  +Y T EPC MC + I  +  +R+ YG S+
Sbjct: 86  GEVNAIRNCVKKYTELGWTPAQITEIWPQSWIYTTAEPCPMCGSTILQSGFKRVVYGTSS 145

Query: 105 PKGGGIE 111
           P   G+ 
Sbjct: 146 PDLVGMG 152


>gi|156742645|ref|YP_001432774.1| CMP/dCMP deaminase [Roseiflexus castenholzii DSM 13941]
 gi|156233973|gb|ABU58756.1| CMP/dCMP deaminase zinc-binding [Roseiflexus castenholzii DSM
           13941]
          Length = 190

 Score = 85.7 bits (212), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 28/150 (18%), Positives = 50/150 (33%), Gaps = 11/150 (7%)

Query: 3   KGNVFMSCALEEAQNAALRN-EIPVGAVAVL--NNKIISRAGNRNRELKDVTAHAEILAI 59
                M   ++ A+    +    P  A      +  ++S   N    L +   HAE++A+
Sbjct: 28  SDEDRMRFVIDLARTNIAQGTGGPFAAAVFRSDDGVLVSAGVNSVTRLTNAVLHAEVVAL 87

Query: 60  RMGCRILSQEILPE----VDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN--G 113
                 +    L       DL  + EPC MC  AI  + ++RL  GA+      I    G
Sbjct: 88  MFAQARVGAYTLRAANTSYDLVTSCEPCAMCLGAILWSGVQRLVCGATRDDAERIGFDEG 147

Query: 114 TQFYTLATCHHS--PEIYPGISEQRSRQII 141
             F             +   +    +  ++
Sbjct: 148 PVFPESYAYLERRGITVVRQVLRAEAANVL 177


>gi|311107007|ref|YP_003979860.1| cytidine and deoxycytidylate deaminase zinc-binding region family
           protein [Achromobacter xylosoxidans A8]
 gi|310761696|gb|ADP17145.1| cytidine and deoxycytidylate deaminase zinc-binding region family
           protein [Achromobacter xylosoxidans A8]
          Length = 164

 Score = 85.7 bits (212), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 23/103 (22%), Positives = 40/103 (38%), Gaps = 2/103 (1%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIR 60
           +     ++  +E A+ A    + P G+V V    +++    N      D T H E    R
Sbjct: 4   ETDKKHLARCVELAKQALDAGDEPFGSVLVSPSGEVLFEDHNH-ASSGDRTRHPEFEIAR 62

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
                +         +Y + E C+MCA+A     + R+ Y  S
Sbjct: 63  WAANNVPAAERAACTVYTSGEHCSMCASAHGWVGLGRIVYACS 105


>gi|170767910|ref|ZP_02902363.1| riboflavin biosynthesis protein RibD [Escherichia albertii TW07627]
 gi|170123398|gb|EDS92329.1| riboflavin biosynthesis protein RibD [Escherichia albertii TW07627]
          Length = 361

 Score = 85.7 bits (212), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 37/150 (24%), Positives = 57/150 (38%), Gaps = 21/150 (14%)

Query: 8   MSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M+ AL+ AQ      +  P VG V V + +I+    +          HAE+ A+RM    
Sbjct: 1   MARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGDGYHHRAGE----PHAEVHALRMA--- 53

Query: 66  LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
             +E       YVTLEPC        C  A+  A + R+     +P       G      
Sbjct: 54  --EEKAKGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVAAMQDPNPQVAGRGLYRLQQ 111

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
           A      ++  G+    + Q+ + F K  R
Sbjct: 112 AG----IDVSHGLMMSEAEQLNKGFLKRMR 137


>gi|92117361|ref|YP_577090.1| riboflavin biosynthesis protein RibD [Nitrobacter hamburgensis X14]
 gi|91800255|gb|ABE62630.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Nitrobacter hamburgensis X14]
          Length = 383

 Score = 85.7 bits (212), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 33/118 (27%), Positives = 42/118 (35%), Gaps = 17/118 (14%)

Query: 4   GNVFMSCALEEAQN--AALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
              FM  AL   +    A      VGAV V ++ I+ R   +         HAE  A+R 
Sbjct: 21  DLRFMQLALALGRRSLGASAPNPAVGAVIVKDDVIVGRGWTQPGGR----PHAEAEALRR 76

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113
                         LYVTLEPC        CA A+  A I R+     +P       G
Sbjct: 77  AGEAA-----RGATLYVTLEPCSHVGKTPPCADAVIAAGITRVVSAIEDPTPEVAGQG 129


>gi|325129557|gb|EGC52381.1| riboflavin biosynthesis protein RibD [Neisseria meningitidis
           OX99.30304]
          Length = 369

 Score = 85.7 bits (212), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 34/159 (21%), Positives = 56/159 (35%), Gaps = 24/159 (15%)

Query: 2   KKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
                 M  AL  A       +  P VG V    ++I+ +  +          HAE+ A+
Sbjct: 4   DTDISMMENALRLAALGRFSTSPNPRVGCVIAHGSQIVGQGFHVKAGE----PHAEVHAL 59

Query: 60  RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113
           R    +           +VTLEPC        CA A+  + + R+     +P       G
Sbjct: 60  RQAGEMAQ-----GATAFVTLEPCSHYGRTPPCAEALLRSGVTRVVAAMRDPNPLVAGKG 114

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDF---FKERR 149
                 A      E   G+ E ++R++ + F    + RR
Sbjct: 115 LALLESAGI--KTEC--GLLEHQARELNRGFLSRIERRR 149


>gi|119509555|ref|ZP_01628702.1| Riboflavin biosynthesis protein RibD [Nodularia spumigena CCY9414]
 gi|119465744|gb|EAW46634.1| Riboflavin biosynthesis protein RibD [Nodularia spumigena CCY9414]
          Length = 448

 Score = 85.7 bits (212), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 31/122 (25%), Positives = 47/122 (38%), Gaps = 19/122 (15%)

Query: 4   GNVFMSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
               M   L  A+ A  R    P VGAV V + +I+    +          HAE+ A++ 
Sbjct: 82  DQAMMQRCLALARRALGRTSPNPLVGAVVVKDGEIVGEGFHPCAGE----PHAEVFALKA 137

Query: 62  G---CRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPK----GG 108
                    +       +YV LEPC        C+ A+  A + ++  G  +P     GG
Sbjct: 138 AGVGADSTQENRACGATVYVNLEPCNHHGRTPPCSEALIAAGVAKVVVGIVDPNPLVGGG 197

Query: 109 GI 110
           GI
Sbjct: 198 GI 199


>gi|238787980|ref|ZP_04631776.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Yersinia
           frederiksenii ATCC 33641]
 gi|238723928|gb|EEQ15572.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Yersinia
           frederiksenii ATCC 33641]
          Length = 369

 Score = 85.7 bits (212), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 36/157 (22%), Positives = 55/157 (35%), Gaps = 21/157 (13%)

Query: 1   MKKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           M+    +M+ A E A+      +  P VG V V + +I+    +          HAE+ A
Sbjct: 1   MQPDEFYMARAFELARLGRFTTSPNPNVGCVLVRDGEIVGEGYHLRAGE----PHAEVHA 56

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
           +RM               YVTLEPC        CA A+  A + R+     +P       
Sbjct: 57  LRMAGEKA-----RGATAYVTLEPCSHHGRTPPCADALVAAGVVRVVAAMQDPNPQVAGR 111

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
           G      A       +  G+    +  +   F K  R
Sbjct: 112 GLYKLKQAG----IAVDHGLMLAEAEAVNLGFLKRMR 144


>gi|302533295|ref|ZP_07285637.1| riboflavin biosynthesis protein RibD [Streptomyces sp. C]
 gi|302442190|gb|EFL14006.1| riboflavin biosynthesis protein RibD [Streptomyces sp. C]
          Length = 376

 Score = 85.7 bits (212), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 32/142 (22%), Positives = 45/142 (31%), Gaps = 25/142 (17%)

Query: 8   MSCALEEAQNAA---LRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGC 63
           M  A+E A         N + VG V       ++    +          HAE+ A+R   
Sbjct: 23  MRRAIELASRGLGSTSPNPV-VGCVITDPAGAVVGEGWHERAGG----PHAEVHALRAAG 77

Query: 64  RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFY 117
                        YVTLEPC        CA A+  A I R+ Y  S+P       G    
Sbjct: 78  EAA-----RGGTAYVTLEPCNHTGRTGPCAQALVDAGIARVVYAVSDPNPQASGGGATLR 132

Query: 118 TLATCHHSPEIYPGISEQRSRQ 139
                    +   G+    + Q
Sbjct: 133 AA-----GIDTEAGLLADEAEQ 149


>gi|316984420|gb|EFV63393.1| riboflavin biosynthesis protein RibD [Neisseria meningitidis
           H44/76]
 gi|325200879|gb|ADY96334.1| riboflavin biosynthesis protein RibD [Neisseria meningitidis
           H44/76]
          Length = 361

 Score = 85.7 bits (212), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 35/153 (22%), Positives = 56/153 (36%), Gaps = 24/153 (15%)

Query: 8   MSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M  AL  A       +  P VG V    ++I+ +  +          HAE+ A+R    +
Sbjct: 2   MENALRLAALGRFSTSPNPRVGCVIAHGSQIVGQGFHVKAGE----PHAEVHALRQAGEM 57

Query: 66  LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
                      +VTLEPC        CA A+  A + R+     +P       G      
Sbjct: 58  AQ-----GATAFVTLEPCSHYGRTPPCAEALVRAGVSRVVAAMRDPNPLVAGKGLALLEA 112

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDF---FKERR 149
           A      E   G+ E ++R++ + F    + RR
Sbjct: 113 AGI--KTEC--GLLEHQARELNRGFLSRIERRR 141


>gi|93006874|ref|YP_581311.1| CMP/dCMP deaminase, zinc-binding [Psychrobacter cryohalolentis K5]
 gi|92394552|gb|ABE75827.1| CMP/dCMP deaminase, zinc-binding [Psychrobacter cryohalolentis K5]
          Length = 165

 Score = 85.7 bits (212), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 24/99 (24%), Positives = 48/99 (48%), Gaps = 2/99 (2%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRM 61
              + +  ++E A  A    + P G+V V  + +++    NR   + D T H EI  ++ 
Sbjct: 10  DDMIHLRRSIELATEALEAGDEPFGSVLVAGDGQVLHEDRNRANSV-DATYHPEIAVVQW 68

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
             + ++ E   +  +Y + E C MC+AA + + + R+ Y
Sbjct: 69  AAKHMTAEARAQAVVYTSGEHCAMCSAAHAWSGLGRIVY 107


>gi|325201538|gb|ADY96992.1| riboflavin biosynthesis protein RibD [Neisseria meningitidis
           M01-240149]
          Length = 369

 Score = 85.7 bits (212), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 34/159 (21%), Positives = 58/159 (36%), Gaps = 24/159 (15%)

Query: 2   KKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
           +     M  AL+ A       +  P VG V    ++I+ +  +          HAE+ A+
Sbjct: 4   ETDISMMQNALKLAALGRFSTSPNPRVGCVIAQGSQIVGQGFHVKAGE----PHAEVHAL 59

Query: 60  RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113
           R    +           +VTLEPC        CA A+  + + R+     +P       G
Sbjct: 60  RQAGEMAQ-----GATAFVTLEPCSHYGRTPPCAEALLRSGVTRVVAAMRDPNPLVAGKG 114

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDF---FKERR 149
                 A      E   G+ E ++R++ + F    + RR
Sbjct: 115 LALLEAAGI--KTEC--GLLEHQARELNRGFLSRIERRR 149


>gi|321254949|ref|XP_003193256.1| hypothetical protein CGB_D0460W [Cryptococcus gattii WM276]
 gi|317459726|gb|ADV21469.1| Hypothetical Protein CGB_D0460W [Cryptococcus gattii WM276]
          Length = 224

 Score = 85.7 bits (212), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 34/121 (28%), Positives = 53/121 (43%), Gaps = 26/121 (21%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIP------VGAVAV--LNNKIISRAGNRNRELKDVTAH 53
           +    +M  ++E          +P       G+V V   NN+++    N   E+ D T H
Sbjct: 35  EVDLHWMRKSIEV---------MPPCHFNAYGSVIVNASNNELLCSGYNSQLEIGDPTEH 85

Query: 54  AEILAIRMGCRILS---------QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASN 104
            EI AIR   +  +          EI P+  +Y T EPC MC + I  +  +R+ YG S+
Sbjct: 86  GEINAIRNCVKKYTELGWTPAQITEIWPQSWIYTTAEPCPMCGSTILQSGFKRVVYGTSS 145

Query: 105 P 105
           P
Sbjct: 146 P 146


>gi|89074668|ref|ZP_01161133.1| Putative riboflavin biosynthesis protein RibD [Photobacterium sp.
           SKA34]
 gi|89049606|gb|EAR55166.1| Putative riboflavin biosynthesis protein RibD [Photobacterium sp.
           SKA34]
          Length = 146

 Score = 85.7 bits (212), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 34/142 (23%), Positives = 49/142 (34%), Gaps = 21/142 (14%)

Query: 3   KGNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +   FM  AL  +  +    R   PVG V V N +I+S    +         HAE +A+ 
Sbjct: 6   QEQAFMIRALLLSHQSLPDCRPNPPVGCVLVKNGEIMSEGFTQPPGQY----HAEAMAL- 60

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
                       +V  YVTLEPC        CA       I+++     +P       G 
Sbjct: 61  --ANYHGS--FTDVTAYVTLEPCSFVGRTPSCAHTFVELGIKKVVVATLDPDSRNSGKGI 116

Query: 115 QFYTLATCHHSPEIYPGISEQR 136
                A      E+  G+ E  
Sbjct: 117 AILKEAG----VEVEVGLCENE 134


>gi|299530728|ref|ZP_07044143.1| riboflavin biosynthesis protein RibD [Comamonas testosteroni S44]
 gi|298721244|gb|EFI62186.1| riboflavin biosynthesis protein RibD [Comamonas testosteroni S44]
          Length = 362

 Score = 85.3 bits (211), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 36/149 (24%), Positives = 59/149 (39%), Gaps = 19/149 (12%)

Query: 8   MSCALEEAQNAA--LRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           M+ ALE+A  A         VG V V  +++II +     ++      HAE++A+R    
Sbjct: 1   MNKALEQAAQALFLSSPNPRVGCVIVDASDRIIGQGF--TQQAGGP--HAEVMALRDASA 56

Query: 65  ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
             +         YVTLEPC+       C  A+  A I ++    ++P       G +   
Sbjct: 57  KGNDVR--GATAYVTLEPCSHHGRTGPCCDALIAAGIGKVVGALTDPNPQVAGQGFERLR 114

Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKE 147
            A      ++  G     SR++   FF  
Sbjct: 115 AAG----VDVEIGPGGAESRELNIGFFSR 139


>gi|58261492|ref|XP_568156.1| hypothetical protein CNL06320 [Cryptococcus neoformans var.
           neoformans JEC21]
 gi|57230238|gb|AAW46639.1| hypothetical protein CNL06320 [Cryptococcus neoformans var.
           neoformans JEC21]
          Length = 209

 Score = 85.3 bits (211), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 33/113 (29%), Positives = 51/113 (45%), Gaps = 23/113 (20%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIP------VGAVAV--LNNKIISRAGNRNRELKDVTAH 53
           +    +M  ++E          +P       G+V V   NN+++    N   E+ D T H
Sbjct: 35  EVDLHWMRKSIEV---------MPPCHFNAYGSVIVNASNNELLCSGYNSQLEIGDPTEH 85

Query: 54  AEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPK 106
            E+ AIR        EI P+  +Y T EPC MC + I  +  +R+ YG S+P 
Sbjct: 86  GEVNAIR------ITEIWPQSWIYTTAEPCPMCGSTILQSGFKRVVYGTSSPD 132


>gi|185535483|gb|ACC77864.1| riboflavin biosynthesis protein [Staphylococcus xylosus]
          Length = 347

 Score = 85.3 bits (211), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 32/149 (21%), Positives = 61/149 (40%), Gaps = 24/149 (16%)

Query: 5   NVFMSCALEEAQNAALRNE--IPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
           + +++ A++ A+    +     PVG+V V + +I+    +  +  K    HAE+ A+ M 
Sbjct: 2   SHYLNYAIQLAKMVEGQTGLNPPVGSVVVNDGRIVGMGAHLQKGGK----HAEVQALDMA 57

Query: 63  CRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116
                Q+      +Y++LEPC        C   I  A I+++ Y   +        G   
Sbjct: 58  -----QDNARGGTIYISLEPCTHYGSTPPCVNKIIEAGIKKVVYAVKDTTL--PSEGDDI 110

Query: 117 YTLATCHHSPEIYPGISEQRSRQIIQDFF 145
              A      E+    S+  +  + +DFF
Sbjct: 111 LEQAG----IEVIFR-SQSDAESLYRDFF 134


>gi|254424276|ref|ZP_05037994.1| Cytidine and deoxycytidylate deaminase zinc-binding region domain
           protein [Synechococcus sp. PCC 7335]
 gi|196191765|gb|EDX86729.1| Cytidine and deoxycytidylate deaminase zinc-binding region domain
           protein [Synechococcus sp. PCC 7335]
          Length = 179

 Score = 85.3 bits (211), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 32/99 (32%), Positives = 42/99 (42%), Gaps = 7/99 (7%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNN--KIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           +  A   A  A      P GA+ V  +   ++   GN      D   HAE + +R     
Sbjct: 30  LRYANTIAMRAQQFGHHPFGAILVAPDDQTVLMAQGNV-----DTVNHAESVLLRTAVTN 84

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASN 104
            S + L    LY T+EPC MCAA    A + RL YG S 
Sbjct: 85  FSAKYLWNCTLYTTVEPCAMCAATQYWANVGRLVYGLSE 123


>gi|77164717|ref|YP_343242.1| cytidine/deoxycytidylate deaminase, zinc-binding region
           [Nitrosococcus oceani ATCC 19707]
 gi|254434141|ref|ZP_05047649.1| Cytidine and deoxycytidylate deaminase zinc-binding region domain
           protein [Nitrosococcus oceani AFC27]
 gi|76883031|gb|ABA57712.1| Cytidine/deoxycytidylate deaminase, zinc-binding region
           [Nitrosococcus oceani ATCC 19707]
 gi|207090474|gb|EDZ67745.1| Cytidine and deoxycytidylate deaminase zinc-binding region domain
           protein [Nitrosococcus oceani AFC27]
          Length = 153

 Score = 85.3 bits (211), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 25/94 (26%), Positives = 39/94 (41%), Gaps = 2/94 (2%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +   +E A  A    + P G+V V  + +++    NR     D T H E    R     +
Sbjct: 4   LRRCVELATKALESGDEPFGSVLVAADGEVLFEDRNRV-ASGDRTRHPEFEIARWAATNM 62

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
           + E      +Y + E C MCAAA     + R+ Y
Sbjct: 63  TPEARVAATVYTSGEHCPMCAAAHGWVGLGRIVY 96


>gi|319639397|ref|ZP_07994147.1| riboflavin biosynthesis protein RibD [Neisseria mucosa C102]
 gi|317399292|gb|EFV79963.1| riboflavin biosynthesis protein RibD [Neisseria mucosa C102]
          Length = 367

 Score = 85.3 bits (211), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 34/149 (22%), Positives = 56/149 (37%), Gaps = 21/149 (14%)

Query: 4   GNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
               M  ALE A+      +  P VG V     +I+ +  +   +  +   HAE+ A+R 
Sbjct: 6   DTQMMQTALELAKLGRFSTSPNPRVGCVIAHGAQIVGQGFH--VKAGEP--HAEVHALRQ 61

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
                          YVTLEPC        CA A+  + + R+    ++P       G  
Sbjct: 62  AQAAAKGAT-----AYVTLEPCSHYGRTPPCAEALIHSGVARVVASMTDPNPLVAGKGLS 116

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDF 144
               A      E   G+ E ++R++ + F
Sbjct: 117 MLEAAGI--RTE--SGLLEAQARELNRGF 141


>gi|78776878|ref|YP_393193.1| riboflavin biosynthesis protein RibD [Sulfurimonas denitrificans
           DSM 1251]
 gi|78497418|gb|ABB43958.1| Riboflavin biosynthesis protein RibD [Sulfurimonas denitrificans
           DSM 1251]
          Length = 336

 Score = 85.3 bits (211), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 38/185 (20%), Positives = 65/185 (35%), Gaps = 50/185 (27%)

Query: 3   KGNVFMSCALEEAQN--AALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAI 59
             N +M  AL EA            VG V +  + +I++   ++   L     HAE+ A+
Sbjct: 4   DENFYMRLALNEAWKYQGLTYPNPAVGCVIISKSGEILALEAHKRAGL----PHAEVEAL 59

Query: 60  RMGCRIL----------------------SQEILPEVDLYVTLEPC------TMCAAAIS 91
           +    +L                        +   +  +Y TLEPC        CA  IS
Sbjct: 60  KSAYIVLSGDKKILELTESAQIHNYLLENHNDYFKDATIYTTLEPCSHIGKTPSCATLIS 119

Query: 92  LARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII-------QD- 143
              I++L  G+ +        G +    A      EI  G+ ++   +++       +D 
Sbjct: 120 KLNIKKLIVGSLDSNEIASG-GNKVVNDAG----VEIKYGVMQKECDELLLPFWLWQKDK 174

Query: 144 --FFK 146
             FFK
Sbjct: 175 FVFFK 179


>gi|299138351|ref|ZP_07031530.1| riboflavin biosynthesis protein RibD [Acidobacterium sp. MP5ACTX8]
 gi|298599597|gb|EFI55756.1| riboflavin biosynthesis protein RibD [Acidobacterium sp. MP5ACTX8]
          Length = 387

 Score = 85.3 bits (211), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 37/154 (24%), Positives = 55/154 (35%), Gaps = 24/154 (15%)

Query: 4   GNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
               +  AL+ AQ A  L +  P VG V V +  ++    +      D   HAEI A++ 
Sbjct: 7   DERHLQRALDLAQEAVGLASPNPTVGCVLVRDGVVLGEGAHH----YDERDHAEIAALKQ 62

Query: 62  GCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQ 115
              +           YVTLEPC+       CA A+  A I R      +P       G  
Sbjct: 63  AASLGHTP--QGATAYVTLEPCSHQGRTGPCADALIAAGIARCVVATVDPNPLVSGGGLA 120

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
               A      E+   +    +  + Q   + RR
Sbjct: 121 KLQAAG----IEV---VVADPASALAQ---RTRR 144


>gi|297154385|gb|ADI04097.1| cytidine/deoxycytidylate deaminase, zinc-binding region
           [Streptomyces bingchenggensis BCW-1]
          Length = 158

 Score = 85.3 bits (211), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 31/151 (20%), Positives = 52/151 (34%), Gaps = 11/151 (7%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMG 62
               +   +E A  A    + P G+V V  +  ++    N      D T H E    R  
Sbjct: 6   DLRHLRRCVELAAEALEAGDEPFGSVLVAADGAVLFEDHNHV-AGGDHTRHPEFEIARWA 64

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA-T 121
              L+ E      +Y + E C MCAAA     + R+ Y +S+ +                
Sbjct: 65  AAHLTPEERAAATVYTSGEHCPMCAAAHGWVGLGRIVYASSSGQLTAWLTDLGVPAPPVR 124

Query: 122 CHHSPEIYPG--------ISEQRSRQIIQDF 144
                E+ PG        +  +R  ++ + F
Sbjct: 125 ALPIQEVIPGAVVEGPFPVLAERVHELHRRF 155


>gi|119716673|ref|YP_923638.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Nocardioides sp. JS614]
 gi|119537334|gb|ABL81951.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Nocardioides sp. JS614]
          Length = 345

 Score = 85.3 bits (211), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 32/148 (21%), Positives = 50/148 (33%), Gaps = 24/148 (16%)

Query: 8   MSCALEEAQN-AALRNEIP-VGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           M  ALE A          P VG V +  + + ++   +R       TAHAE  A+     
Sbjct: 1   MRRALELAAAPGVPLGPNPRVGCVLLDEDGRTVAEGHHR----GAGTAHAEADALARAG- 55

Query: 65  ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
                        VTLEPC        CA A+  A +RR+ +   +P             
Sbjct: 56  ----VRARGATAVVTLEPCNHTGRTGPCAQALIGAGVRRVVFAQPDPNPAAAGGADTLRA 111

Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFK 146
                   ++  G+    S  ++  F+ 
Sbjct: 112 A-----GVDVESGLLHVESG-LLNRFWA 133


>gi|225709398|gb|ACO10545.1| tRNA-specific adenosine deaminase-like protein 3 [Caligus
           rogercresseyi]
          Length = 257

 Score = 85.3 bits (211), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 25/105 (23%), Positives = 52/105 (49%), Gaps = 5/105 (4%)

Query: 28  AVAVLN--NKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEIL-PEVDLYVTLEPCT 84
           A+ V    + I++   +   +      H  + AI    R    E L   +D+Y+  EPC 
Sbjct: 147 AIIVDPARDSIVALGHDGRPDF--PLKHPVMNAIEELSRKKESEYLASGLDIYLKNEPCA 204

Query: 85  MCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIY 129
           MC+ A+   RI+R+++   +P+ G +++  + +TL   +H  +++
Sbjct: 205 MCSMALVHMRIKRIFFIQDSPQCGALKSRMKLHTLPGINHVFQVF 249


>gi|160872316|ref|ZP_02062448.1| riboflavin biosynthesis protein RibD [Rickettsiella grylli]
 gi|159121115|gb|EDP46453.1| riboflavin biosynthesis protein RibD [Rickettsiella grylli]
          Length = 360

 Score = 85.3 bits (211), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 28/126 (22%), Positives = 48/126 (38%), Gaps = 17/126 (13%)

Query: 6   VFMSCALEEA--QNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
            ++  AL  A  +         VGA+ V +N +I++  +          HAE+ AI    
Sbjct: 7   QYLELALSLAEIRRGFCSPNPCVGAILVKDNTVIAKGYHH----ASGLPHAEVEAI---- 58

Query: 64  RILSQEILPEVDLYVTLEPC-------TMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116
           + ++   +    LYVTL+PC         C   I  + I ++ YG  +P      +    
Sbjct: 59  QSVNPVHVKGATLYVTLQPCCHSAKKTPPCTDLIIKSGIVKVIYGFQDPNPAVSHHTDNL 118

Query: 117 YTLATC 122
              A  
Sbjct: 119 LKHAGI 124


>gi|257055207|ref|YP_003133039.1| cytosine/adenosine deaminase [Saccharomonospora viridis DSM 43017]
 gi|256585079|gb|ACU96212.1| cytosine/adenosine deaminase [Saccharomonospora viridis DSM 43017]
          Length = 163

 Score = 85.3 bits (211), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 33/136 (24%), Positives = 54/136 (39%), Gaps = 9/136 (6%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKII-SRAGNRNRELKDVTAHAEILAIR 60
           ++   ++   +E A  A    + P G+V V    ++ +   NR     D T H E    R
Sbjct: 4   ERELPYLRRCVELASEALEAGDEPFGSVLVDAEGVVRAEDRNR-IAGGDRTRHPEFELAR 62

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
                L+ E      +Y + E C MCAAA     + R+ Y AS+ +   + +  +     
Sbjct: 63  WSTTALTPEERRGATVYTSGEHCPMCAAAHGWVGLGRIVYVASSAQ---LSSWLEELGAP 119

Query: 121 TCHHSP----EIYPGI 132
                P    EI PG+
Sbjct: 120 APPVRPLPAEEITPGV 135


>gi|218962081|ref|YP_001741856.1| riboflavin biosynthesis protein RibD [Candidatus Cloacamonas
           acidaminovorans]
 gi|167730738|emb|CAO81650.1| riboflavin biosynthesis protein RibD [Candidatus Cloacamonas
           acidaminovorans]
          Length = 368

 Score = 85.0 bits (210), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 38/145 (26%), Positives = 63/145 (43%), Gaps = 21/145 (14%)

Query: 6   VFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
            +M  A++ A+ A    +  P VG+V V NN++IS        L+  + H+EI       
Sbjct: 8   QYMQRAIKVAEKARGKCSPNPFVGSVIVKNNQVISEGW----TLEYGSDHSEIQ-----A 58

Query: 64  RILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFY 117
              + +   +  L+VTLEPC        CA AI  A I+ +Y G  +P       G    
Sbjct: 59  LKKAGKKAKDATLFVTLEPCSHYGKTPPCAQAIIDAGIKEVYIGIYDPNPLVKGKGIAML 118

Query: 118 TLATCHHSPEIYPGISEQRSRQIIQ 142
             A      +++ G  E++ R  ++
Sbjct: 119 KEAG----IDVHYGFLEEKIRTQLE 139


>gi|114319537|ref|YP_741220.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Alkalilimnicola ehrlichii MLHE-1]
 gi|114225931|gb|ABI55730.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Alkalilimnicola ehrlichii MLHE-1]
          Length = 369

 Score = 85.0 bits (210), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 35/155 (22%), Positives = 57/155 (36%), Gaps = 23/155 (14%)

Query: 4   GNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
            N+FM  AL  A+    +   P   VG V V +  I+    +          HAE +A+ 
Sbjct: 8   DNLFMGRALRLARR-PQQPPHPNPAVGCVLVRDGLIVGEGWHERAGE----PHAEAMALH 62

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
                   E       YVTLEPC        C+ A+  A + R+    ++P       G 
Sbjct: 63  RAG-----EQASGATAYVTLEPCSHHGRTPPCSEALLAAGVVRVVAAMTDPNPQVAGRGL 117

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
           +    A      E+  G+  +++  +   F +  R
Sbjct: 118 RRLRAAGL----EVATGLMAEQAAALNPGFTQRMR 148


>gi|114330216|ref|YP_746438.1| CMP/dCMP deaminase, zinc-binding [Nitrosomonas eutropha C91]
 gi|114307230|gb|ABI58473.1| CMP/dCMP deaminase, zinc-binding protein [Nitrosomonas eutropha
           C91]
          Length = 195

 Score = 85.0 bits (210), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 31/112 (27%), Positives = 43/112 (38%), Gaps = 7/112 (6%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           MS  LE  +     +  P  A      +  +I+   NR       TAHAEILA+ +    
Sbjct: 32  MSYVLELMRINMATDGGPFAAAVFERDSGLLIAAGTNRVVSSHCSTAHAEILALSLAQAK 91

Query: 66  LSQEIL-----PEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN 112
           L    L     P  +L  + EPC MC  A+  + +R L   A       I  
Sbjct: 92  LGSHDLSADGLPACELVTSAEPCVMCFGAVIWSGVRSLVCAARGEDVEAIGF 143


>gi|307293539|ref|ZP_07573383.1| riboflavin biosynthesis protein RibD [Sphingobium chlorophenolicum
           L-1]
 gi|306879690|gb|EFN10907.1| riboflavin biosynthesis protein RibD [Sphingobium chlorophenolicum
           L-1]
          Length = 317

 Score = 85.0 bits (210), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 30/147 (20%), Positives = 49/147 (33%), Gaps = 24/147 (16%)

Query: 8   MSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           M+ A+  ++        P   VG + V    ++ R        K    HAE  A+     
Sbjct: 1   MAAAIALSERGRGL-STPNPNVGCLIVKEGHVVGRGW----TQKGGRPHAEAQALDEAM- 54

Query: 65  ILSQEILPEVDLYVTLEPC-------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFY 117
               E       YVTLEPC         CA  ++ A +RR+     +P       G  + 
Sbjct: 55  ----ERARGATAYVTLEPCFHLSSRGPRCADLMARAGVRRVVIALRDPDPRTDGQGADWL 110

Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDF 144
                     +  G+  Q +   ++ F
Sbjct: 111 RQRG----IAVDMGLMAQEAAAAMRGF 133


>gi|254480859|ref|ZP_05094105.1| riboflavin biosynthesis protein RibD [marine gamma proteobacterium
           HTCC2148]
 gi|214038654|gb|EEB79315.1| riboflavin biosynthesis protein RibD [marine gamma proteobacterium
           HTCC2148]
          Length = 371

 Score = 85.0 bits (210), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 35/148 (23%), Positives = 54/148 (36%), Gaps = 22/148 (14%)

Query: 8   MSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M+ AL+ A+         P VG V   +  +I     +         HAE+ A+      
Sbjct: 10  MARALQLARRGQYSCMPNPHVGCVLERDGAVIGEGFTQPAGGN----HAEVQALAEAGDA 65

Query: 66  LSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
                      YVTLEPC+       CA A+  A + R++    +P      NG      
Sbjct: 66  ------SGATAYVTLEPCSHIGKTGPCADALITAGVSRVFAAIEDPNPLVAGNGLDKLRA 119

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKE 147
           A      E+  G+ E  +R++I  F   
Sbjct: 120 AG----IEVEVGLLEADARKVIPGFISR 143


>gi|332286796|ref|YP_004418707.1| putative riboflavin-specific deaminase [Pusillimonas sp. T7-7]
 gi|330430749|gb|AEC22083.1| putative riboflavin-specific deaminase [Pusillimonas sp. T7-7]
          Length = 374

 Score = 85.0 bits (210), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 30/150 (20%), Positives = 49/150 (32%), Gaps = 18/150 (12%)

Query: 3   KGNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
               +M  AL  A++          V  + V + ++++      R+      HAEI+A+R
Sbjct: 2   SDEGWMRQALHLAESVLYITAPNPRVACLIVRDGRLLAEG--ATRQAGGP--HAEIVALR 57

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
                          +YVTLEPC        C  A+  AR  R+     +P       G 
Sbjct: 58  QAAERGIDT--AGATVYVTLEPCSHYGRTPPCVDALIAARPARVVIAMGDPNPLVHGQGI 115

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
                        +   I  + +  I   F
Sbjct: 116 AKLRATG----IAVTTDICTEEALAINPGF 141


>gi|163738649|ref|ZP_02146063.1| riboflavin biosynthesis protein RibD [Phaeobacter gallaeciensis
           BS107]
 gi|161387977|gb|EDQ12332.1| riboflavin biosynthesis protein RibD [Phaeobacter gallaeciensis
           BS107]
          Length = 358

 Score = 85.0 bits (210), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 30/146 (20%), Positives = 48/146 (32%), Gaps = 21/146 (14%)

Query: 8   MSCALEEAQNAALR--NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           MS AL   +           VG V V + +I+ R   +         HAE  A++    +
Sbjct: 1   MSLALSLGRRGQGNCWPNPAVGCVIVRDGRIVGRGWTQPGGR----PHAEPQALQQAGDL 56

Query: 66  LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
                     +YV+LEPC        CA A+  A + R+     +       +G      
Sbjct: 57  A-----RGATVYVSLEPCSHTGKTPPCAQALINAGVARVVAAIEDSDPRVSGHGFAMLRD 111

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFF 145
           A       +  G+    +      FF
Sbjct: 112 AGIP----VTTGVCSDAAAWDHAGFF 133


>gi|194364457|ref|YP_002027067.1| CMP/dCMP deaminase zinc-binding [Stenotrophomonas maltophilia
           R551-3]
 gi|194347261|gb|ACF50384.1| CMP/dCMP deaminase zinc-binding [Stenotrophomonas maltophilia
           R551-3]
          Length = 186

 Score = 85.0 bits (210), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 35/149 (23%), Positives = 58/149 (38%), Gaps = 17/149 (11%)

Query: 10  CALEEAQNAALRN-EIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
            A+E ++         P GAV     +K+I+   NR        AHAE +A  +  + L 
Sbjct: 33  LAIELSRLNVEHASGGPFGAVVFGPEDKVIAAGVNRVMPHSTSLAHAENMAYMLAQQRLQ 92

Query: 68  QEILPEV----DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA--- 120
              L  V     L  + +PC  C  A   A I RL  GA++     +E  T F       
Sbjct: 93  TPRLNAVLSPVTLATSSQPCCQCYGATVWAGIDRLLIGANSAD---VEELTPFDEGPLPA 149

Query: 121 ----TCHHS-PEIYPGISEQRSRQIIQDF 144
                 +    E+  G++   +R +++ +
Sbjct: 150 DWVGELNKRGIEVVQGLNRDAARSVLRAY 178


>gi|328881089|emb|CCA54328.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase or
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Streptomyces venezuelae ATCC 10712]
          Length = 417

 Score = 84.6 bits (209), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 31/142 (21%), Positives = 48/142 (33%), Gaps = 25/142 (17%)

Query: 8   MSCALEEAQN---AALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
           M  A+E A     A   N + VG V    + + +    ++         HAE+ A+R   
Sbjct: 70  MRRAVELAARGLGATSPNPV-VGCVVTDASGRPVGEGWHQRAGG----PHAEVHALREAG 124

Query: 64  RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFY 117
            +           YVTLEPC        CA A+  A I R+ Y   +P            
Sbjct: 125 ALA-----RGGTAYVTLEPCNHTGRTGPCAQALIEAGISRVVYAVGDPNPQATGGADTLR 179

Query: 118 TLATCHHSPEIYPGISEQRSRQ 139
                    ++  G+ E  +  
Sbjct: 180 AA-----GVDVRQGLLEDEAEA 196


>gi|215430296|ref|ZP_03428215.1| putative bifunctional riboflavin biosynthesis protein RIBG:
           diaminohydroxyphosphoribosylaminopyrimidine deaminase +
           [Mycobacterium tuberculosis EAS054]
 gi|289753491|ref|ZP_06512869.1| riboflavin-specific deaminase [Mycobacterium tuberculosis EAS054]
 gi|289694078|gb|EFD61507.1| riboflavin-specific deaminase [Mycobacterium tuberculosis EAS054]
          Length = 339

 Score = 84.6 bits (209), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 33/152 (21%), Positives = 61/152 (40%), Gaps = 24/152 (15%)

Query: 8   MSCALEEAQ--NAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           M  A+E +           PVGAV V  N +I+   G           HAE++A+R    
Sbjct: 13  MGLAIEHSYQVKGTTYPNPPVGAVIVDPNGRIVGAGGTEPAGGD----HAEVVALRRAGG 68

Query: 65  ILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
           +          + VT+EPC        C  A+  AR+  + Y  ++P  G    G    +
Sbjct: 69  LA-----TGAIVVVTMEPCNHYGKTPPCVNALIEARVGTVVYAVADPN-GIAGGGAGRLS 122

Query: 119 LATCHHSPEIYPGISEQR-SRQIIQDFFKERR 149
            A      ++  G+  ++ +   ++++  ++R
Sbjct: 123 AAGL----QVRSGVLAEQVAAGPLREWLHKQR 150


>gi|325204773|gb|ADZ00227.1| riboflavin biosynthesis protein RibD [Neisseria meningitidis
           M01-240355]
          Length = 361

 Score = 84.6 bits (209), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 34/153 (22%), Positives = 56/153 (36%), Gaps = 24/153 (15%)

Query: 8   MSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M  AL  A       +  P VG V    ++I+ +  +          HAE+ A+R    +
Sbjct: 2   MENALRLAALGRFSTSPNPRVGCVIAHGSQIVGQGFHVKAGE----PHAEVHALRQAGEM 57

Query: 66  LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
                      +VTLEPC        CA A+  + + R+     +P       G      
Sbjct: 58  AQ-----GATAFVTLEPCSHYGRTPPCAEALLRSGVTRVVAAMRDPNPLVAGKGLALLEA 112

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDF---FKERR 149
           A      E   G+ E ++R++ + F    + RR
Sbjct: 113 AGI--KTEC--GLLEHQARELNRGFLSRIERRR 141


>gi|299142759|ref|ZP_07035888.1| riboflavin biosynthesis protein RibD [Prevotella oris C735]
 gi|298575788|gb|EFI47665.1| riboflavin biosynthesis protein RibD [Prevotella oris C735]
          Length = 116

 Score = 84.6 bits (209), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 33/120 (27%), Positives = 49/120 (40%), Gaps = 13/120 (10%)

Query: 3   KGNVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +   +M   L+ A+N          VGAV V +++II    +          HAE+ A  
Sbjct: 2   EHEYYMKRCLQLAENGRQNAKLNPMVGAVIVAHDRIIGEGYHVRCGEG----HAEVNAF- 56

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
              R   +++LPE  +YV+LEPC        CA  I    I+R   G  +P       G 
Sbjct: 57  ASVRPEDEKLLPEATIYVSLEPCSHYGKTPPCADLIISKGIKRCVCGCVDPFAKVQGRGI 116


>gi|169630540|ref|YP_001704189.1| putative cytidine/deoxycytidylate deaminase [Mycobacterium
           abscessus ATCC 19977]
 gi|169242507|emb|CAM63535.1| Putative cytidine/deoxycytidylate deaminase [Mycobacterium
           abscessus]
          Length = 158

 Score = 84.6 bits (209), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 25/103 (24%), Positives = 41/103 (39%), Gaps = 2/103 (1%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIR 60
                 +   +E A  A    + P G++    +  +++   NR     D T H E    R
Sbjct: 3   DNDIQHLRRCVELATEALDAGDEPFGSLLTGPDGAVLAEDRNRV-GAGDPTRHPEFELAR 61

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
              R LS        +Y + E C MC+AA +   + R+ Y +S
Sbjct: 62  WSVRNLSPTDRALSTVYTSGEHCPMCSAAHAWVGLGRIVYASS 104


>gi|156055462|ref|XP_001593655.1| hypothetical protein SS1G_05083 [Sclerotinia sclerotiorum 1980]
 gi|154702867|gb|EDO02606.1| hypothetical protein SS1G_05083 [Sclerotinia sclerotiorum 1980
           UF-70]
          Length = 188

 Score = 84.6 bits (209), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 33/121 (27%), Positives = 51/121 (42%), Gaps = 5/121 (4%)

Query: 12  LEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEI 70
           LE  + A  + + P  AV +  +N+ +  +     +  D   HAE    R+      +E 
Sbjct: 39  LEVQRRAVTQGKRPFAAVLLGPDNETVLLSH----QSIDQVNHAESSLARLAYSHYKKEY 94

Query: 71  LPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYP 130
           L    L  T EPC MC+A I  A I R+ Y A+N +  G+             H+ +I  
Sbjct: 95  LWRCTLISTWEPCAMCSATIYWAHIGRIVYAATNEQLAGLTGPGNRENFTLKWHTRDILE 154

Query: 131 G 131
           G
Sbjct: 155 G 155


>gi|78221462|ref|YP_383209.1| CMP/dCMP deaminase, zinc-binding protein [Geobacter metallireducens
           GS-15]
 gi|78192717|gb|ABB30484.1| CMP/dCMP deaminase, zinc-binding protein [Geobacter metallireducens
           GS-15]
          Length = 186

 Score = 84.6 bits (209), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 33/151 (21%), Positives = 61/151 (40%), Gaps = 11/151 (7%)

Query: 8   MSCALEEAQNAALRN-EIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           M+ A+  A++        P GA      + +++S   N      +   HAE++AI     
Sbjct: 29  MAFAISLARSNVEEGTGGPFGAAIFNRESGELVSVGVNLVVAGMNSVLHAEMVAIMAAEA 88

Query: 65  ILSQEILP---EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENG-TQFYTLA 120
           +L    L      +L+ + EPC MC   I  + + RL   A+      I       Y  +
Sbjct: 89  VLGTYTLAVRGRFELFSSCEPCAMCLGGILWSGVERLVCAAAADDARAIGFDEGPVYPES 148

Query: 121 TCH---HSPEIYPGISEQRSRQIIQDFFKER 148
            C+      EI  G   +  ++++ + ++ER
Sbjct: 149 YCYLKERGIEIERGFMREEGKRVL-ELYRER 178


>gi|254804368|ref|YP_003082589.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
           phosphoribosylamino uracil reductase [Neisseria
           meningitidis alpha14]
 gi|254667910|emb|CBA04065.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
           phosphoribosylamino uracil reductase [Neisseria
           meningitidis alpha14]
          Length = 369

 Score = 84.6 bits (209), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 33/159 (20%), Positives = 55/159 (34%), Gaps = 24/159 (15%)

Query: 2   KKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
                 M  AL  A       +  P VG V    ++++ +  +          HAE+ A+
Sbjct: 4   DTDISMMETALRLAALGRFSTSPNPRVGCVIAHGSQVVGQGFHVKAGE----PHAEVHAL 59

Query: 60  RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113
                +           +VTLEPC        CA A+  A + R+     +P       G
Sbjct: 60  HQAGEMAQ-----GATAFVTLEPCSHYGRTPPCAEALVRAGVSRVVAAMRDPNPLVAGKG 114

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDF---FKERR 149
                 A      E   G+ E ++R++ + F    + RR
Sbjct: 115 LALLEAAGI--KTEC--GLLEHQARELNRGFLSRIERRR 149


>gi|330792481|ref|XP_003284317.1| hypothetical protein DICPUDRAFT_86189 [Dictyostelium purpureum]
 gi|325085770|gb|EGC39171.1| hypothetical protein DICPUDRAFT_86189 [Dictyostelium purpureum]
          Length = 222

 Score = 84.6 bits (209), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 28/146 (19%), Positives = 47/146 (32%), Gaps = 20/146 (13%)

Query: 4   GNVFMSCALE--EAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIR 60
               M   ++  +A+NA        G+  V  N   +    N + +  D T H E++ + 
Sbjct: 53  HETKMQELIDYTKAKNAW------FGSSIVHKNGTTVCYGVNESHQYNDPTLHGEMVVMH 106

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
              ++          LY T E C MC +A    +   + Y  S       +   Q    +
Sbjct: 107 NCSKLFGITNYSNYTLYTTGESCPMCQSAAMWNKFSTIVYATSIETMYCDKCLGQILIDS 166

Query: 121 TC-----------HHSPEIYPGISEQ 135
                        +  P I  GI E 
Sbjct: 167 NFLAAFGNGLQNGYVPPVIIGGILED 192


>gi|330797600|ref|XP_003286847.1| hypothetical protein DICPUDRAFT_77728 [Dictyostelium purpureum]
 gi|325083149|gb|EGC36609.1| hypothetical protein DICPUDRAFT_77728 [Dictyostelium purpureum]
          Length = 476

 Score = 84.6 bits (209), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 1/74 (1%)

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
            Q +     LY+T EPC MC+ A+  +RI+R+ YG+S    GG+ +  + +T  + +H  
Sbjct: 397 GQYLANGYHLYLTREPCVMCSMALVHSRIKRVVYGSSGID-GGLGSYLKIHTEKSLNHRF 455

Query: 127 EIYPGISEQRSRQI 140
           E+Y    +     I
Sbjct: 456 EVYKDFMKDECDSI 469



 Score = 41.0 bits (96), Expect = 0.048,   Method: Composition-based stats.
 Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 5/39 (12%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLN--NKII 37
           M+     M  ALE+A+ A  R   P+GAV V    NK++
Sbjct: 280 MRTH---MMSALEQAKIAKTRGHKPIGAVLVDPETNKVV 315


>gi|296105681|ref|YP_003617381.1| cytidine/deoxycytidylate deaminase [Legionella pneumophila 2300/99
           Alcoy]
 gi|295647582|gb|ADG23429.1| cytidine/deoxycytidylate deaminase [Legionella pneumophila 2300/99
           Alcoy]
          Length = 160

 Score = 84.6 bits (209), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 35/142 (24%), Positives = 57/142 (40%), Gaps = 12/142 (8%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNN-KIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           FM+  +  A         P GA+ V ++ +I+ ++ N          H E+  I      
Sbjct: 16  FMTATIAVA---GENPMAPYGAIIVYDDKEILLKSVNS--AHHHPLMHGELSVIHTLFNN 70

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI-ENGTQFYTLATCHH 124
                + ++ LY T EPC MCAAAI  A I ++ YG+S      +     Q         
Sbjct: 71  GFDGDVSKLSLYTTAEPCPMCAAAIYWAMIPKVVYGSSIAFLHDLFGRQIQVGAEEVLSK 130

Query: 125 SPEIY-----PGISEQRSRQII 141
           +P+ Y      G+ E+   Q+ 
Sbjct: 131 TPDFYSCRLIGGVMEEECNQLF 152


>gi|123966659|ref|YP_001011740.1| putative diaminohydroxyphosphoribosylaminopyrimidine deaminase and
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Prochlorococcus marinus str. MIT 9515]
 gi|123201025|gb|ABM72633.1| putative Diaminohydroxyphosphoribosylaminopyrimidine deaminase and
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Prochlorococcus marinus str. MIT 9515]
          Length = 368

 Score = 84.6 bits (209), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 34/150 (22%), Positives = 56/150 (37%), Gaps = 22/150 (14%)

Query: 4   GNVFMSCALEEAQNA-ALRNEIP-VGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIR 60
              +M  A+  A       N  P VGAV +  N  +IS   +     K    HAE +A  
Sbjct: 8   DIKWMKRAIYLASLGKGRTNPNPMVGAVILDKNGNLISEGFH----SKSGMPHAEAMAFN 63

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
              +        +  LYV LEPC        C   I    I++++    +P       G 
Sbjct: 64  NLKK-----NARDGILYVNLEPCCHHGKTPPCVDKIISFGIKKVFVSIEDPDKRVSGKGI 118

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
           +    +      E++ G+ E+ S ++ + F
Sbjct: 119 KLLKDSG----IEVHLGLCEKESTELNKSF 144


>gi|31792603|ref|NP_855096.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino) uracil
           reductase [Mycobacterium bovis AF2122/97]
 gi|121637339|ref|YP_977562.1| putative bifunctional riboflavin biosynthesis protein RIBG:
           diaminohydroxyphosphoribosylaminopyrimidine deaminase +
           5-amino-6-(5-phosphoribosylamino) uracil reductase
           [Mycobacterium bovis BCG str. Pasteur 1173P2]
 gi|215426746|ref|ZP_03424665.1| putative bifunctional riboflavin biosynthesis protein RIBG:
           diaminohydroxyphosphoribosylaminopyrimidine deaminase +
           [Mycobacterium tuberculosis T92]
 gi|224989814|ref|YP_002644501.1| putative riboflavin biosynthesis protein [Mycobacterium bovis BCG
           str. Tokyo 172]
 gi|260186348|ref|ZP_05763822.1| putative riboflavin biosynthesis protein [Mycobacterium
           tuberculosis CPHL_A]
 gi|260200464|ref|ZP_05767955.1| putative riboflavin biosynthesis protein [Mycobacterium
           tuberculosis T46]
 gi|289442854|ref|ZP_06432598.1| riboflavin biosynthesis protein RibD [Mycobacterium tuberculosis
           T46]
 gi|289447005|ref|ZP_06436749.1| riboflavin biosynthesis protein ribG [Mycobacterium tuberculosis
           CPHL_A]
 gi|289749967|ref|ZP_06509345.1| riboflavin biosynthesis protein ribG [Mycobacterium tuberculosis
           T92]
 gi|31618192|emb|CAD94305.1| PROBABLE BIFUNCTIONAL riboflavin biosynthesis protein RIBG :
           Diaminohydroxyphosphoribosylaminopyrimidine deaminase
           (Riboflavin-specific deaminase) +
           5-amino-6-(5-phosphoribosylamino) uracil reductase (HTP
           reductase) [Mycobacterium bovis AF2122/97]
 gi|121492986|emb|CAL71457.1| Probable bifunctional riboflavin biosynthesis protein RIBG :
           Diaminohydroxyphosphoribosylaminopyrimidine deaminase +
           5-amino-6-(5-phosphoribosylamino) uracil reductase
           [Mycobacterium bovis BCG str. Pasteur 1173P2]
 gi|224772927|dbj|BAH25733.1| putative riboflavin biosynthesis protein [Mycobacterium bovis BCG
           str. Tokyo 172]
 gi|289415773|gb|EFD13013.1| riboflavin biosynthesis protein RibD [Mycobacterium tuberculosis
           T46]
 gi|289419963|gb|EFD17164.1| riboflavin biosynthesis protein ribG [Mycobacterium tuberculosis
           CPHL_A]
 gi|289690554|gb|EFD57983.1| riboflavin biosynthesis protein ribG [Mycobacterium tuberculosis
           T92]
          Length = 339

 Score = 84.6 bits (209), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 33/152 (21%), Positives = 61/152 (40%), Gaps = 24/152 (15%)

Query: 8   MSCALEEAQ--NAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           M  A+E +           PVGAV V  N +I+   G           HAE++A+R    
Sbjct: 13  MGLAIEHSYQVKGTTYPNPPVGAVIVDPNGRIVGAGGTEPAGGD----HAEVVALRRAGG 68

Query: 65  ILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
           +          + VT+EPC        C  A+  AR+  + Y  ++P  G    G    +
Sbjct: 69  LA-----TGAIVVVTMEPCNHYGKTPPCVNALIEARVGTVVYAVADPN-GIAGGGAGRLS 122

Query: 119 LATCHHSPEIYPGISEQR-SRQIIQDFFKERR 149
            A      ++  G+  ++ +   ++++  ++R
Sbjct: 123 AAGL----QVRSGVLAEQVAAGPLREWLHKQR 150


>gi|332299428|ref|YP_004441349.1| riboflavin biosynthesis protein RibD [Porphyromonas asaccharolytica
           DSM 20707]
 gi|332176491|gb|AEE12181.1| riboflavin biosynthesis protein RibD [Porphyromonas asaccharolytica
           DSM 20707]
          Length = 343

 Score = 84.6 bits (209), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 35/152 (23%), Positives = 56/152 (36%), Gaps = 21/152 (13%)

Query: 3   KGNVFMSCALEEAQNAALRN----EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
              ++M   L+ A  A  +        VG+V V  +KII    +          HAE++A
Sbjct: 11  SDQIYMQRCLQLA--ALAQGRTSPNPMVGSVIVYKDKIIGEGYHHYAGA----PHAEVMA 64

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
            R     L   ++ +   YV+LEPC        CA  ++  R  R+     +P       
Sbjct: 65  WRSVPEELRS-VIGKATWYVSLEPCAHYGKTPPCAELLAKLRPARVVIAMLDPFAKVDGR 123

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
           G      A      E+  G  EQ +  + + F
Sbjct: 124 GVARLREAG----IEVSIGCLEQEAIALNRHF 151


>gi|260204674|ref|ZP_05772165.1| putative riboflavin biosynthesis protein [Mycobacterium
           tuberculosis K85]
 gi|289574078|ref|ZP_06454305.1| riboflavin biosynthesis protein ribG [Mycobacterium tuberculosis
           K85]
 gi|289538509|gb|EFD43087.1| riboflavin biosynthesis protein ribG [Mycobacterium tuberculosis
           K85]
          Length = 339

 Score = 84.6 bits (209), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 33/152 (21%), Positives = 61/152 (40%), Gaps = 24/152 (15%)

Query: 8   MSCALEEAQ--NAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           M  A+E +           PVGAV V  N +I+   G           HAE++A+R    
Sbjct: 13  MGLAIEHSYQVKGTTYPNPPVGAVIVDPNGRIVGAGGTEPAGGD----HAEVVALRRAGG 68

Query: 65  ILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
           +          + VT+EPC        C  A+  AR+  + Y  ++P  G    G    +
Sbjct: 69  LA-----TGAIVVVTMEPCNHYGKTPPCVNALIEARVGTVVYAVADPN-GIAGGGAGRLS 122

Query: 119 LATCHHSPEIYPGISEQR-SRQIIQDFFKERR 149
            A      ++  G+  ++ +   ++++  ++R
Sbjct: 123 AAGL----QVRSGVLAEQVAAGPLREWLHKQR 150


>gi|330799923|ref|XP_003287990.1| hypothetical protein DICPUDRAFT_78829 [Dictyostelium purpureum]
 gi|325082014|gb|EGC35511.1| hypothetical protein DICPUDRAFT_78829 [Dictyostelium purpureum]
          Length = 234

 Score = 84.6 bits (209), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 35/152 (23%), Positives = 52/152 (34%), Gaps = 20/152 (13%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIR-- 60
               M  AL  A +   R     GA  +  N  ++  A N          HAEI AI   
Sbjct: 53  HENNMRIALNLAISVNGR----FGAAIINRNGTLLCTAMN--NGTVSKILHAEINAILNC 106

Query: 61  ---MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNP--KGGGIENGTQ 115
              M  R + Q       LYVT EPC MC +A+  ++   + +G        G   +   
Sbjct: 107 TDIMAARGIKQSSWEGYYLYVTGEPCPMCTSALIWSKFDAVIFGTYVDTLYCGKCNSQLP 166

Query: 116 FYTL------ATCHHSPEIYPGISEQRSRQII 141
             +              +I  GI E  + ++ 
Sbjct: 167 ITSNYINGFSYGVGSKLKIVGGILESETDKLF 198


>gi|283779657|ref|YP_003370412.1| riboflavin biosynthesis protein RibD [Pirellula staleyi DSM 6068]
 gi|283438110|gb|ADB16552.1| riboflavin biosynthesis protein RibD [Pirellula staleyi DSM 6068]
          Length = 373

 Score = 84.6 bits (209), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 36/147 (24%), Positives = 54/147 (36%), Gaps = 22/147 (14%)

Query: 3   KGNVFMSCALEEAQNAALRNEI-P-VGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAI 59
               FM  A+E A+      E  P VG V V    +++ R  +          HAE+ A+
Sbjct: 11  SDEAFMREAIELAERGLGLVEPNPMVGCVIVSPRGEVVGRGWHGRFGG----PHAEVEAL 66

Query: 60  RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113
           +        E      LYVTLEPC        CA A+  A + R+    ++P       G
Sbjct: 67  QQAG-----EQARGSTLYVTLEPCSHFGKTPPCADAVIAAGVARVVAAMTDPFPKVQGGG 121

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQI 140
                 A       +  G+ E  +R +
Sbjct: 122 FAKLRSAG----IAVESGVCEAEARAL 144


>gi|126348142|emb|CAJ89863.1| putative cytidine and deoxycytidylate deaminase [Streptomyces
           ambofaciens ATCC 23877]
          Length = 164

 Score = 84.2 bits (208), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 30/147 (20%), Positives = 52/147 (35%), Gaps = 11/147 (7%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +   +E A  A    + P G+V    +  +++   NR     D T H E    R     L
Sbjct: 11  LRRCVELAAEALEAGDEPFGSVLAGADGAVLAEDHNRV-ASGDRTRHPEFELARWSAAHL 69

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASN-------PKGGGIENGTQFYTL 119
           +        +Y + E C MCAAA +   + R+ Y AS+        + G      +   +
Sbjct: 70  TPAERAAATVYTSGEHCPMCAAAHAWVGLGRIVYVASSQQLGGWLAEFGAAAPPVRPLPV 129

Query: 120 ATCHHSPEIYPGISE--QRSRQIIQDF 144
                   +   + E     R + + F
Sbjct: 130 HEVAPGVVVEGPVPELCDEIRALHRRF 156


>gi|325133593|gb|EGC56254.1| riboflavin biosynthesis protein RibD [Neisseria meningitidis
           M13399]
          Length = 369

 Score = 84.2 bits (208), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 33/159 (20%), Positives = 55/159 (34%), Gaps = 24/159 (15%)

Query: 2   KKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
                 M  AL  A       +  P VG V    ++++ +  +          HAE+ A+
Sbjct: 4   DTDISMMETALRLAALGRFSTSPNPRVGCVIAHGSQVVGQGFHVKAGE----PHAEVHAL 59

Query: 60  RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113
                +           +VTLEPC        CA A+  A + R+     +P       G
Sbjct: 60  HQAGEMAQ-----GATAFVTLEPCSHYGRTPPCAEALVRAGVSRVVAAMRDPNPLVAGKG 114

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDF---FKERR 149
                 A      E   G+ E ++R++ + F    + RR
Sbjct: 115 LALLEAAGI--KTEC--GLLEHQARELNRGFLSRIERRR 149


>gi|146157359|gb|ABQ08114.1| hypothetical protein [Tropheryma whipplei]
          Length = 60

 Score = 84.2 bits (208), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 23/60 (38%), Positives = 33/60 (55%)

Query: 59  IRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
           IR   ++L    L  + L+VT+EPCTMCA AI  +RI R+ +G  N K G + +      
Sbjct: 1   IRKASQMLKDWRLSGLTLFVTMEPCTMCAGAIVTSRISRVVFGVFNNKTGSVGSRIDILR 60


>gi|163733978|ref|ZP_02141419.1| riboflavin biosynthesis protein ribD [Roseobacter litoralis Och
           149]
 gi|161392514|gb|EDQ16842.1| riboflavin biosynthesis protein ribD [Roseobacter litoralis Och
           149]
          Length = 366

 Score = 84.2 bits (208), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 37/155 (23%), Positives = 59/155 (38%), Gaps = 21/155 (13%)

Query: 1   MKKGNVFMSCALEEAQNAALR--NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           M + + +M+ AL   +    R      VG V V  ++++ R   +         HAE   
Sbjct: 1   MTEASRYMALALSLGRRGLGRVWPNPAVGCVIVKEDRVVGRGWTQPGGR----PHAETQ- 55

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
                   +       D+YVTLEPC        CAAA+  A + R++    +P       
Sbjct: 56  ----ALAQAGAQARGADVYVTLEPCAHHGKTPPCAAALVKAGVARVFAATGDPDPRVHGA 111

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
           G +    A  H    +  GI E ++R+    FF  
Sbjct: 112 GFRALEQAGIH----VQSGILEAQARRDNAGFFAR 142


>gi|160900631|ref|YP_001566213.1| riboflavin biosynthesis protein RibD [Delftia acidovorans SPH-1]
 gi|160366215|gb|ABX37828.1| riboflavin biosynthesis protein RibD [Delftia acidovorans SPH-1]
          Length = 369

 Score = 84.2 bits (208), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 35/159 (22%), Positives = 59/159 (37%), Gaps = 20/159 (12%)

Query: 1   MKKGNVFMSCALEEAQNAA--LRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEIL 57
           M      M  AL  A  A         VG V V  + +++ +     ++      HAE++
Sbjct: 1   MTNTVPHMHQALGLAAQALFLSSPNPRVGCVLVAPDGRVVGQGF--TQQAGGP--HAEVM 56

Query: 58  AIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIE 111
           A+R    +   E +     YVTLEPC+       C  A+  A + ++    ++P      
Sbjct: 57  ALRDA--VARGEDVRGATAYVTLEPCSHQGRTGPCCDALIAAGVAKVVGALTDPNPQVAG 114

Query: 112 NGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF-KERR 149
            G      A      ++  G     SR++   FF +  R
Sbjct: 115 QGFARLRAAG----VDVVVGPGADESRELNIGFFSRMLR 149


>gi|294010277|ref|YP_003543737.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Sphingobium
           japonicum UT26S]
 gi|292673607|dbj|BAI95125.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Sphingobium
           japonicum UT26S]
          Length = 317

 Score = 84.2 bits (208), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 29/147 (19%), Positives = 50/147 (34%), Gaps = 24/147 (16%)

Query: 8   MSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           M+ A+  +Q        P   VG + V +  ++ R   +         HAE  A+     
Sbjct: 1   MAAAIALSQRGRGL-STPNPNVGCLIVKDGHVVGRGWTQRGGR----PHAEAQALDEAL- 54

Query: 65  ILSQEILPEVDLYVTLEPC-------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFY 117
               +       YVTLEPC         CA  ++ A +RR+     +P       G  + 
Sbjct: 55  ----DRARGATAYVTLEPCFHLSPRGPRCADRMARAGVRRVVIALRDPDPRTDGQGAAWL 110

Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDF 144
                 H   +  G+    +   ++ F
Sbjct: 111 RQ----HGVAVDMGLMAGEAAAAMRGF 133


>gi|148358330|ref|YP_001249537.1| cytidine/deoxycytidylate deaminase [Legionella pneumophila str.
           Corby]
 gi|148280103|gb|ABQ54191.1| cytidine/deoxycytidylate deaminase [Legionella pneumophila str.
           Corby]
          Length = 153

 Score = 84.2 bits (208), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 35/142 (24%), Positives = 57/142 (40%), Gaps = 12/142 (8%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNN-KIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           FM+  +  A         P GA+ V ++ +I+ ++ N          H E+  I      
Sbjct: 9   FMTATIAVA---GENPMAPYGAIIVYDDKEILLKSVNS--AHHHPLMHGELSVIHTLFNN 63

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI-ENGTQFYTLATCHH 124
                + ++ LY T EPC MCAAAI  A I ++ YG+S      +     Q         
Sbjct: 64  GFDGDVSKLSLYTTAEPCPMCAAAIYWAMIPKVVYGSSIAFLHDLFGRQIQVGAEEVLSK 123

Query: 125 SPEIY-----PGISEQRSRQII 141
           +P+ Y      G+ E+   Q+ 
Sbjct: 124 TPDFYSCRLIGGVMEEECNQLF 145


>gi|219557312|ref|ZP_03536388.1| putative bifunctional riboflavin biosynthesis protein RIBG:
           diaminohydroxyphosphoribosylaminopyrimidine deaminase +
           [Mycobacterium tuberculosis T17]
          Length = 237

 Score = 84.2 bits (208), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 33/152 (21%), Positives = 61/152 (40%), Gaps = 24/152 (15%)

Query: 8   MSCALEEAQ--NAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           M  A+E +           PVGAV V  N +I+   G           HAE++A+R    
Sbjct: 13  MGLAIEHSYQVKGTTYPNPPVGAVIVDPNGRIVGAGGTEPAGGD----HAEVVALRRAGG 68

Query: 65  ILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
           +          + VT+EPC        C  A+  AR+  + Y  ++P  G    G    +
Sbjct: 69  LA-----TGAIVVVTMEPCNHYGKTPPCVNALIEARVGTVVYAVADPN-GIAGGGAGRLS 122

Query: 119 LATCHHSPEIYPGISEQR-SRQIIQDFFKERR 149
            A      ++  G+  ++ +   ++++  ++R
Sbjct: 123 AAGL----QVRSGVLAEQVAAGPLREWLHKQR 150


>gi|254467350|ref|ZP_05080761.1| riboflavin biosynthesis protein RibD [Rhodobacterales bacterium
           Y4I]
 gi|206688258|gb|EDZ48740.1| riboflavin biosynthesis protein RibD [Rhodobacterales bacterium
           Y4I]
          Length = 365

 Score = 84.2 bits (208), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 31/153 (20%), Positives = 49/153 (32%), Gaps = 21/153 (13%)

Query: 1   MKKGNVFMSCALEEAQNAALR--NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           M   + +M+ AL   +           VG V V   +I+ R   +         HAE  A
Sbjct: 1   MDTDHRYMALALSLGRRGQGNCWPNPAVGCVIVKGRRIVGRGWTKPGGR----PHAETEA 56

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
           +                 YVTLEPC        CA A+  A + R+     +        
Sbjct: 57  LAQAGEAA-----RGATAYVTLEPCAHQGATPPCAQALIKAGVARVVAAIGDSDPRVSGQ 111

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
           G +    A       +  G+   ++ +    FF
Sbjct: 112 GIRMLRDAG----IRVDTGVWGAQAARDHAGFF 140


>gi|254420634|ref|ZP_05034358.1| Cytidine and deoxycytidylate deaminase zinc-binding region domain
           protein [Brevundimonas sp. BAL3]
 gi|196186811|gb|EDX81787.1| Cytidine and deoxycytidylate deaminase zinc-binding region domain
           protein [Brevundimonas sp. BAL3]
          Length = 209

 Score = 84.2 bits (208), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 36/157 (22%), Positives = 56/157 (35%), Gaps = 36/157 (22%)

Query: 4   GNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTA-----HA 54
              FM+ A++ A   A   E    P VG V V + +II++A          TA     HA
Sbjct: 7   DRAFMAQAIDLAT--ARMGETWPNPAVGCVIVKDGRIIAQA---------ATAPGGRPHA 55

Query: 55  EILAIRMGCRILSQEILPEVDLYVTLEPCTM-------CAAAISLARIRRLYYGASNPKG 107
           E  A+      +         +YVTLEPC         CA  ++ A + R+     +P  
Sbjct: 56  EEQAVPAAGAEI-----EGATVYVTLEPCGARSSGRQSCAHFLTEAGVERVVIACLDPSP 110

Query: 108 GGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
                GT+            +  G+       + + F
Sbjct: 111 FAAGRGTERLRAKGL----TVETGLMCDEGAALCEGF 143


>gi|66824141|ref|XP_645425.1| CMP/dCMP deaminase, zinc-binding domain-containing protein
           [Dictyostelium discoideum AX4]
 gi|60473538|gb|EAL71481.1| CMP/dCMP deaminase, zinc-binding domain-containing protein
           [Dictyostelium discoideum AX4]
          Length = 224

 Score = 84.2 bits (208), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 25/140 (17%), Positives = 51/140 (36%), Gaps = 14/140 (10%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
              +M  A++ A     +     GA  V  N  ++  G           H E+ AI    
Sbjct: 51  HEKYMKIAIDVAVENNSK----FGAAIVHKNGTLACTG--VNIGGSRMYHGEVKAIMNCT 104

Query: 64  RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG--------IENGTQ 115
              ++    +  +Y T EPC MC+AAI   + +++ + +               +++   
Sbjct: 105 SKYAKATWEDYYMYTTGEPCPMCSAAIMWTKFQKVIFASYVSNMYCERCFNQLPMDSNEI 164

Query: 116 FYTLATCHHSPEIYPGISEQ 135
           F      +H+  +  G+ + 
Sbjct: 165 FKLGYGINHNIVVIGGVLDN 184


>gi|148975779|ref|ZP_01812610.1| Probable riboflavin biosynthesis protein RibD [Vibrionales
           bacterium SWAT-3]
 gi|145964852|gb|EDK30104.1| Probable riboflavin biosynthesis protein RibD [Vibrionales
           bacterium SWAT-3]
          Length = 141

 Score = 84.2 bits (208), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 31/149 (20%), Positives = 53/149 (35%), Gaps = 25/149 (16%)

Query: 4   GNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
              +M  AL+ +  A    +   PVG + V N+K++S    +         HAE+ A+  
Sbjct: 2   NQQYMLQALQASHQALPDCQPNPPVGCILVKNDKVVSVGYTQKVGGN----HAEVEAL-- 55

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
                    +  V  YVTLEPC        CA  +  A ++ +     +P       G  
Sbjct: 56  ---NHYDGDMEGVTAYVTLEPCSFVGRTPACANTLVKAGVKHVVVAMLDPDPRNNGRGVA 112

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDF 144
                   H  ++  G+     +  +  F
Sbjct: 113 ILES----HGVKVDVGL----CQAQVSAF 133


>gi|282866177|ref|ZP_06275224.1| riboflavin biosynthesis protein RibD [Streptomyces sp. ACTE]
 gi|282558961|gb|EFB64516.1| riboflavin biosynthesis protein RibD [Streptomyces sp. ACTE]
          Length = 366

 Score = 84.2 bits (208), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 33/141 (23%), Positives = 46/141 (32%), Gaps = 25/141 (17%)

Query: 8   MSCALEEAQN---AALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGC 63
           M  A+  A     A   N + VG V +    +      +R         HAEI A+R   
Sbjct: 10  MRRAIALAARGLGATSPNPV-VGCVVLDAAGQPAGEGFHRRAGG----PHAEIHALREAG 64

Query: 64  RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFY 117
                E       YVTLEPC        CA A+  A IRR+ Y   +P            
Sbjct: 65  -----ERARGGTAYVTLEPCNHTGRTGPCAQALLDAGIRRVVYAVGDPNPQATGGADTLR 119

Query: 118 TLATCHHSPEIYPGISEQRSR 138
                    ++  G+    + 
Sbjct: 120 AE-----GVQVEQGLLADEAE 135


>gi|162452084|ref|YP_001614451.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Sorangium cellulosum 'So ce 56']
 gi|161162666|emb|CAN93971.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Sorangium cellulosum 'So ce 56']
          Length = 381

 Score = 84.2 bits (208), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 34/145 (23%), Positives = 55/145 (37%), Gaps = 20/145 (13%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
               M  A+EEA  A      PVGAV +    ++++ A +     +              
Sbjct: 13  DAAMMRLAIEEAHKAMPSPNPPVGAVVLNAAGEVVAVAHHARAGEEHAEG---------L 63

Query: 63  CRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116
               + +      LYVTLEPC        C  A+  A I+R+  GA +P    +  G Q 
Sbjct: 64  ALAAAGDAARGGTLYVTLEPCNHEGRTPPCVDAVLSAGIKRVVVGAPDPNPSVVGGGAQR 123

Query: 117 YTLATCHHSPEIYPGISEQRSRQII 141
            + A       +  G++   +R +I
Sbjct: 124 LSDAGL----AVDVGVAGAEARALI 144


>gi|86749753|ref|YP_486249.1| riboflavin biosynthesis protein RibD [Rhodopseudomonas palustris
           HaA2]
 gi|86572781|gb|ABD07338.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Rhodopseudomonas palustris HaA2]
          Length = 389

 Score = 84.2 bits (208), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 36/145 (24%), Positives = 50/145 (34%), Gaps = 21/145 (14%)

Query: 3   KGNVFMSCALEEAQNAALR-NEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
               FM  AL   +    R    P VGAV V +  I+ R             HAE+ A+ 
Sbjct: 26  TDRRFMQLALTLGRRGLGRTGTNPAVGAVLVKDGVIVGRGW----TQDGGRPHAEVEAL- 80

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
                 + E      LYVTLEPC        CA AI  A + R+     +P       G 
Sbjct: 81  ----ARAGEAARGATLYVTLEPCSHHGRSPPCADAIIAAGVARVVSAIEDPNPLVGGQGH 136

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQ 139
                A       +  G+  + + +
Sbjct: 137 GKLRAAG----IAVELGVCVEEAAR 157


>gi|326388321|ref|ZP_08209917.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Novosphingobium nitrogenifigens DSM 19370]
 gi|326207053|gb|EGD57874.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Novosphingobium nitrogenifigens DSM 19370]
          Length = 321

 Score = 84.2 bits (208), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 35/131 (26%), Positives = 44/131 (33%), Gaps = 18/131 (13%)

Query: 1   MKKGNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           M     +M  A   A       R    VGAV V  N+++ R     R       HAE  A
Sbjct: 1   MPTDADWMRSAAALAARGRPLSRPNPAVGAVLVRENRVVGRGF--TRAGGRP--HAEAEA 56

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC-------TMCAAAISLARIRRLYYGASNPKGGGIE 111
           + M              LYVTLEPC         CA  +  AR  R+  G ++P      
Sbjct: 57  LAMAGDAT-----RGATLYVTLEPCAHVSPRGPACADLVVAARPARVVVGCTDPDPRTAG 111

Query: 112 NGTQFYTLATC 122
            G      A  
Sbjct: 112 QGIARLRDAGI 122


>gi|149202273|ref|ZP_01879246.1| riboflavin biosynthesis protein RibD [Roseovarius sp. TM1035]
 gi|149144371|gb|EDM32402.1| riboflavin biosynthesis protein RibD [Roseovarius sp. TM1035]
          Length = 364

 Score = 83.8 bits (207), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 31/149 (20%), Positives = 49/149 (32%), Gaps = 21/149 (14%)

Query: 4   GNVFMSCALEEAQNAALR--NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
              FM+ AL   +    +      VG V V   +I+ R             HAE  A+  
Sbjct: 5   DARFMALALSLGRRGMGQCAPNPAVGCVIVQGGRIVGRGW----TSPGGRPHAEPQALAQ 60

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
              +           YV+LEPC        CA A+  A I R+     +        G  
Sbjct: 61  AGELA-----RGATAYVSLEPCAHHGQTPPCAEALIAAGIARVVAPFDDNDPRVAGRGFA 115

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDF 144
               A      E+  G+  +++ + +  F
Sbjct: 116 MLRAAG----IEVRTGVMAEQAGRDLAGF 140


>gi|229526073|ref|ZP_04415477.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Vibrio
           cholerae bv. albensis VL426]
 gi|229336231|gb|EEO01249.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Vibrio
           cholerae bv. albensis VL426]
          Length = 141

 Score = 83.8 bits (207), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 33/148 (22%), Positives = 50/148 (33%), Gaps = 25/148 (16%)

Query: 5   NVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
              M  ALE ++ A        PVG V V    I++    +         HAE+ A+   
Sbjct: 3   EEHMLRALEVSKFALPNCLPNPPVGCVLVKGGSIVAEGFTQKIGGN----HAEVQALEA- 57

Query: 63  CRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116
                   +  V  YVTLEPC        CAA +  + I+ +     +P       G Q 
Sbjct: 58  ----YSGDMDSVTAYVTLEPCSFIGRTPACAATLVKSGIKHVVVSILDPDLRNSGRGIQI 113

Query: 117 YTLATCHHSPEIYPGISEQRSRQIIQDF 144
              A      ++  G+        +  F
Sbjct: 114 LEQAG----IQVDIGL----CSSQVSAF 133


>gi|134115449|ref|XP_773438.1| hypothetical protein CNBI0520 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|50256064|gb|EAL18791.1| hypothetical protein CNBI0520 [Cryptococcus neoformans var.
           neoformans B-3501A]
          Length = 224

 Score = 83.8 bits (207), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 33/122 (27%), Positives = 53/122 (43%), Gaps = 26/122 (21%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIP------VGAVAV--LNNKIISRAGNRNRELKDVTAH 53
           +    +M  ++E          +P       G+V V   NN+++    N   E+ D T H
Sbjct: 35  EVDLHWMRKSIEV---------MPPCHFNAYGSVIVNASNNELLCSGYNSQLEIGDPTEH 85

Query: 54  AEILAIRMGCRILS---------QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASN 104
            E+ AIR   +  +          EI P+  +Y T EPC MC + I  +  +R+ YG S+
Sbjct: 86  GEVNAIRNCVKKYTELGWTPAQITEIWPQSWIYTTAEPCPMCGSTILQSGFKRVIYGTSS 145

Query: 105 PK 106
           P 
Sbjct: 146 PD 147


>gi|255080300|ref|XP_002503730.1| predicted protein [Micromonas sp. RCC299]
 gi|226518997|gb|ACO64988.1| predicted protein [Micromonas sp. RCC299]
          Length = 215

 Score = 83.8 bits (207), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 31/130 (23%), Positives = 46/130 (35%), Gaps = 21/130 (16%)

Query: 26  VGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83
           VG V V   +  ++    +          HAE+ A+R                YVTLEPC
Sbjct: 96  VGCVIVDERSGVVVGEGYHPKAGE----PHAEVFALRAAGA-----NAKGCTAYVTLEPC 146

Query: 84  ------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRS 137
                   C+ A+  A + R+  G  +P       G +    A      E+  G  E+  
Sbjct: 147 DHFGRTPPCSRALVDAGVTRVVVGFVDPDPRVSGGGIRTLLDAG----IEVCVGCCEEEC 202

Query: 138 RQIIQDFFKE 147
           R+I  DF   
Sbjct: 203 REINADFIAR 212


>gi|319787998|ref|YP_004147473.1| CMP/dCMP deaminase zinc-binding protein [Pseudoxanthomonas
           suwonensis 11-1]
 gi|317466510|gb|ADV28242.1| CMP/dCMP deaminase zinc-binding protein [Pseudoxanthomonas
           suwonensis 11-1]
          Length = 186

 Score = 83.8 bits (207), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 33/149 (22%), Positives = 58/149 (38%), Gaps = 17/149 (11%)

Query: 10  CALEEAQNAAL-RNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
            A+E ++     R+  P GAV    ++++I+   NR        AHAE +A  +  + L 
Sbjct: 33  LAIELSRRNVEARSGGPFGAVVFGPDHRVIATGVNRVVPHTTSLAHAENMAYMLAQQKLQ 92

Query: 68  QEILPEV----DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC- 122
              L +V     L  + +PC  C  A   A I RL  GA       +   T+F       
Sbjct: 93  TPRLNDVLAPVTLATSSQPCCQCYGATIWAGIDRLLIGARAED---VMELTEFDEGPLPA 149

Query: 123 -------HHSPEIYPGISEQRSRQIIQDF 144
                       +   I   ++R++++ +
Sbjct: 150 DWTGELGRRGISVTRDILRDQAREVLRAY 178


>gi|260441248|ref|ZP_05795064.1| putative diaminohydroxyphosphoribosylaminopyrimidine deaminase
           [Neisseria gonorrhoeae DGI2]
 gi|268600600|ref|ZP_06134767.1| riboflavin biosynthesis protein RibD [Neisseria gonorrhoeae PID18]
 gi|291044592|ref|ZP_06570301.1| riboflavin biosynthesis protein RibD [Neisseria gonorrhoeae DGI2]
 gi|268584731|gb|EEZ49407.1| riboflavin biosynthesis protein RibD [Neisseria gonorrhoeae PID18]
 gi|291011486|gb|EFE03482.1| riboflavin biosynthesis protein RibD [Neisseria gonorrhoeae DGI2]
          Length = 369

 Score = 83.8 bits (207), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 34/159 (21%), Positives = 57/159 (35%), Gaps = 24/159 (15%)

Query: 2   KKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
                 M  AL+ A       +  P VG V    ++I+ +  +          HAE+ A+
Sbjct: 4   DTDISMMENALDLADLGRFSTSPNPRVGCVIAHGSQIVGQGFHVKAGE----PHAEVHAL 59

Query: 60  RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113
           R    +           +VTLEPC        CA A+  + + R+     +P       G
Sbjct: 60  RQAGEMA-----KGATAFVTLEPCSHYGRTPPCAEALLRSGVTRVVAAMRDPNPPVAGKG 114

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDF---FKERR 149
                 A      E   G+ E ++R++ + F    + RR
Sbjct: 115 LVLLKAAGI--KTEC--GLLENKARELNRGFLSRIERRR 149


>gi|281210887|gb|EFA85053.1| hypothetical protein PPL_02049 [Polysphondylium pallidum PN500]
          Length = 234

 Score = 83.8 bits (207), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 35/156 (22%), Positives = 57/156 (36%), Gaps = 22/156 (14%)

Query: 4   GNVFMSCALEEA--QNAALRNEIPVGAVAVLNNKIIS-RAGNRNRELKDVTAHAEILAIR 60
              +M  A + A  + +          V V  N  ++    N+N   K    H EI+AI 
Sbjct: 46  HEKYMQIAYDLAVAKKSI------FTTVIVAPNGTVACTGLNQNE--KSAIYHGEIVAIL 97

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF---- 116
               I ++       LY T E C MC AA   A   ++ YG S       +   Q     
Sbjct: 98  NCSAIYNKNTWEGYSLYTTGESCAMCQAAAMWAGFDQIIYGTSIETLYCEKCLGQLPVLS 157

Query: 117 -------YTLATCHHSPEIYPGISEQRSRQIIQDFF 145
                  Y L+  +   +I  GI  +++  +  ++F
Sbjct: 158 NQINALAYGLSGNNSPAQIIGGILARKTDTLFPNYF 193


>gi|118578520|ref|YP_899770.1| CMP/dCMP deaminase [Pelobacter propionicus DSM 2379]
 gi|118501230|gb|ABK97712.1| CMP/dCMP deaminase, zinc-binding protein [Pelobacter propionicus
           DSM 2379]
          Length = 204

 Score = 83.8 bits (207), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 26/148 (17%), Positives = 55/148 (37%), Gaps = 11/148 (7%)

Query: 8   MSCALEEAQNAALRN-EIPVGA-VAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M   ++ ++         P GA V   +  +I+   N          HAE++A+    + 
Sbjct: 32  MGFVIQLSRLNVCHGSGGPFGAAVFGRDGMLIAPGINLVASSNCSLLHAEMVALACAQQA 91

Query: 66  LSQEILPE-----VDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN--GTQFYT 118
           L +  + +      DLY + EPC MC  AI  + +  L  GA +     +    G +   
Sbjct: 92  LGRFDIGDGGRVACDLYASTEPCAMCFGAIPWSGVSGLVCGARDRDARAVGFDEGPKLSD 151

Query: 119 -LATCHHS-PEIYPGISEQRSRQIIQDF 144
            +         +   +    +  +++++
Sbjct: 152 WVGALGRRGISVERDLLRHEACSVLREY 179


>gi|254456442|ref|ZP_05069871.1| riboflavin biosynthesis protein RibD [Candidatus Pelagibacter sp.
           HTCC7211]
 gi|207083444|gb|EDZ60870.1| riboflavin biosynthesis protein RibD [Candidatus Pelagibacter sp.
           HTCC7211]
          Length = 353

 Score = 83.8 bits (207), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 33/146 (22%), Positives = 63/146 (43%), Gaps = 25/146 (17%)

Query: 8   MSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M  AL+ A++   L    P VG + V ++KIIS      +   +   HAE+ AI+     
Sbjct: 1   MDLALDLARSNEGLTGTNPSVGCIIVKHDKIISIG----QTSYNGRPHAEVNAIKN---- 52

Query: 66  LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
            S E L +  +YVTLEPC        C ++I  ++++ + Y   +          +    
Sbjct: 53  -SIENLNDATMYVTLEPCSHHGVTPPCTSSIIKSKLKEVIYSIIDIDQRVKGKTYKILKS 111

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFF 145
                  ++  G+ +++    ++ F+
Sbjct: 112 K----KIKVRTGLLKKK----VKQFY 129


>gi|33861821|ref|NP_893382.1| putative diaminohydroxyphosphoribosylaminopyrimidine deaminase and
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Prochlorococcus marinus subsp. pastoris str. CCMP1986]
 gi|33640189|emb|CAE19724.1| putative Diaminohydroxyphosphoribosylaminopyrimidine deaminase and
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Prochlorococcus marinus subsp. pastoris str. CCMP1986]
          Length = 362

 Score = 83.8 bits (207), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 31/150 (20%), Positives = 55/150 (36%), Gaps = 22/150 (14%)

Query: 4   GNVFMSCALEEAQ--NAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIR 60
              +M  A+  A            VGAV +  N  +IS   +     K    HAE +A  
Sbjct: 8   DIKWMKRAIYLASLGKGRTSPNPMVGAVILDKNGNLISEGFH----SKSGMPHAEAMAFN 63

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
              +        +  +YV LEPC        C   I    I+R++    +P       G 
Sbjct: 64  NLKK-----DARDGTIYVNLEPCCHQGKTPPCVDKIISFGIKRVFVSIEDPDKRMSGKGI 118

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
           +    A      +++ G+ ++ S+++ + F
Sbjct: 119 KLLKDAG----IKVHLGLCKKESKELNKSF 144


>gi|241763274|ref|ZP_04761331.1| riboflavin biosynthesis protein RibD [Acidovorax delafieldii 2AN]
 gi|241367549|gb|EER61836.1| riboflavin biosynthesis protein RibD [Acidovorax delafieldii 2AN]
          Length = 368

 Score = 83.8 bits (207), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 39/148 (26%), Positives = 57/148 (38%), Gaps = 19/148 (12%)

Query: 9   SCALEEAQNAA-LRNEIP-VGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
             AL +A  A  + N  P VG V V  +  I+ +   +         HAE++A+R     
Sbjct: 9   REALRQAARALFISNPNPRVGCVLVDSDGTILGKGFTQQAGG----PHAEVMALRDAA-- 62

Query: 66  LSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
                +     YVTLEPC        C+ A+  A I R+     +P       G  F  L
Sbjct: 63  TGGRDVRGATAYVTLEPCAHQGRTGPCSDALISAGIGRVVASIEDPNPLVAGQG--FARL 120

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKE 147
                + E+ PG     SR++   FF  
Sbjct: 121 RAAGVAVEVGPG--ACESRELNIGFFSR 146


>gi|159898944|ref|YP_001545191.1| riboflavin biosynthesis protein RibD [Herpetosiphon aurantiacus
           ATCC 23779]
 gi|159891983|gb|ABX05063.1| riboflavin biosynthesis protein RibD [Herpetosiphon aurantiacus
           ATCC 23779]
          Length = 371

 Score = 83.8 bits (207), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 28/87 (32%), Positives = 37/87 (42%), Gaps = 15/87 (17%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC-- 83
           VGAV V   +I+ R   +        AHAE++A+R        E      LYVTLEPC  
Sbjct: 30  VGAVVVQAGQIVGRGHTQPAGQ----AHAEVMALREAG-----EQARGASLYVTLEPCTI 80

Query: 84  ----TMCAAAISLARIRRLYYGASNPK 106
                 C  AI  A I  +   + +P 
Sbjct: 81  WGRTPPCTDAIIAAGIAEVIIASRDPN 107


>gi|320012649|gb|ADW07499.1| CMP/dCMP deaminase zinc-binding protein [Streptomyces flavogriseus
           ATCC 33331]
          Length = 162

 Score = 83.8 bits (207), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 26/102 (25%), Positives = 40/102 (39%), Gaps = 2/102 (1%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRM 61
                +   +E A       + P G+V V    ++ +   NR     D T H E    R 
Sbjct: 6   SDLRHLRRCVELAAEGLRAGDEPFGSVLVDAEGEVRAEGRNRV-AGGDRTRHPEFELARW 64

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
               ++ E      +Y + E C MCAAA +   + R+ Y AS
Sbjct: 65  AADRMTPEERATAVVYTSGEHCPMCAAAHAWVGLGRIVYVAS 106


>gi|197248845|ref|YP_002145398.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Salmonella enterica subsp. enterica serovar
           Agona str. SL483]
 gi|197212548|gb|ACH49945.1| riboflavin biosynthesis protein RibD [Salmonella enterica subsp.
           enterica serovar Agona str. SL483]
          Length = 367

 Score = 83.8 bits (207), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 37/155 (23%), Positives = 56/155 (36%), Gaps = 21/155 (13%)

Query: 3   KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +   +M+ AL+ AQ      +  P VG V V N  I+    ++     D   HAE+ A+R
Sbjct: 2   QDEFYMARALKLAQRGRFTTHPNPNVGCVIVNNGDIVGEGYHQR--AGDP--HAEVHALR 57

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           M               YVTLEPC        C  A+  A + R+     +P       G 
Sbjct: 58  MAGAKAKGAT-----AYVTLEPCSHHGRTPPCCDALIAAGVARVVAAMQDPNPQVAGRGL 112

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
                A       +  G+    +  + + F K  R
Sbjct: 113 YRLQQAG----IAVSHGLMMSEAEALNKGFLKRMR 143


>gi|59800550|ref|YP_207262.1| putative diaminohydroxyphosphoribosylaminopyrimidine deaminase
           [Neisseria gonorrhoeae FA 1090]
 gi|293397713|ref|ZP_06641919.1| riboflavin biosynthesis protein RibD [Neisseria gonorrhoeae F62]
 gi|59717445|gb|AAW88850.1| putative diaminohydroxyphosphoribosylaminopyrimidine deaminase
           [Neisseria gonorrhoeae FA 1090]
 gi|291611659|gb|EFF40728.1| riboflavin biosynthesis protein RibD [Neisseria gonorrhoeae F62]
          Length = 369

 Score = 83.8 bits (207), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 34/153 (22%), Positives = 56/153 (36%), Gaps = 24/153 (15%)

Query: 8   MSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M  AL  A       +  P VG V    ++I+ +  +          HAE+ A+R    +
Sbjct: 10  MENALRLAALGRFSTSPNPRVGCVIAHGSQIVGQGFHVKAGE----PHAEVHALRQAGEM 65

Query: 66  LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
                      +VTLEPC        CA A+  + + R+     +P       G      
Sbjct: 66  A-----KGATAFVTLEPCSHYGRTPPCAEALLRSGVTRVVAAMRDPNPPVAGKGLVLLKA 120

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDF---FKERR 149
           A      E   G+ E ++R++ + F    + RR
Sbjct: 121 AGI--KTEC--GLLENKARELNRGFLSRIERRR 149


>gi|325926037|ref|ZP_08187401.1| cytosine/adenosine deaminase [Xanthomonas perforans 91-118]
 gi|325543563|gb|EGD14982.1| cytosine/adenosine deaminase [Xanthomonas perforans 91-118]
          Length = 186

 Score = 83.8 bits (207), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 36/149 (24%), Positives = 60/149 (40%), Gaps = 17/149 (11%)

Query: 10  CALEEAQ-NAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
            A+E ++ N   R+  P GAV    +++II+ A NR        AHAE +A  +  + L 
Sbjct: 33  LAIELSRMNVRERSGGPFGAVVFGPDHRIIAAAVNRVVPQTTSLAHAENMAYMLAQQRLQ 92

Query: 68  QEILPEV----DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA--- 120
              L +V     L  + +PC  C  A   A I RL  GA       +   TQF       
Sbjct: 93  TPRLNDVLSPVTLATSAQPCCQCYGATVWAGIDRLLIGARADDVMAL---TQFDEGPLPA 149

Query: 121 -----TCHHSPEIYPGISEQRSRQIIQDF 144
                      E+   +   ++  +++++
Sbjct: 150 DWVGELSRRGIEVVRDVLRDQACAVLRNY 178


>gi|332025750|gb|EGI65908.1| tRNA-specific adenosine deaminase-like protein 3 [Acromyrmex
           echinatior]
          Length = 423

 Score = 83.4 bits (206), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 20/60 (33%), Positives = 36/60 (60%)

Query: 80  LEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139
           +EPC +CA A+  +R+ R++YG +N   G + + T  +T+   +H   ++ GI E+  RQ
Sbjct: 353 IEPCPLCAMALLHSRVARIFYGTANQNVGVLGSKTILHTVPGLNHRYRVWSGILERECRQ 412


>gi|54303332|ref|YP_133325.1| putative riboflavin biosynthesis protein RibD [Photobacterium
           profundum SS9]
 gi|46916762|emb|CAG23525.1| Putative riboflavin biosynthesis protein RibD [Photobacterium
           profundum SS9]
          Length = 141

 Score = 83.4 bits (206), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 32/140 (22%), Positives = 53/140 (37%), Gaps = 21/140 (15%)

Query: 5   NVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
            +FM  AL+ +++A        PVG V V N+ I+S    +         HAE+ A+   
Sbjct: 3   EIFMLRALQISKSALPDCTPNPPVGCVLVKNDFIVSEGFTQAIGGN----HAEVQALNS- 57

Query: 63  CRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116
                      +  YVTLEPC        CA  +  + I+R+     +P       G + 
Sbjct: 58  ----YSGSTENITAYVTLEPCSYVGRTPACANTLINSGIKRVVVSMLDPDPRNSGKGVKI 113

Query: 117 YTLATCHHSPEIYPGISEQR 136
              A      ++  G+   +
Sbjct: 114 LEQAG----VQVEIGLCNDQ 129


>gi|289663533|ref|ZP_06485114.1| hypothetical protein XcampvN_10764 [Xanthomonas campestris pv.
           vasculorum NCPPB702]
 gi|289670923|ref|ZP_06491998.1| hypothetical protein XcampmN_21153 [Xanthomonas campestris pv.
           musacearum NCPPB4381]
          Length = 186

 Score = 83.4 bits (206), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 36/149 (24%), Positives = 60/149 (40%), Gaps = 17/149 (11%)

Query: 10  CALEEAQ-NAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
            A+E ++ N   R+  P GAV    +++II+ A NR        AHAE +A  +  + L 
Sbjct: 33  LAIELSRMNVQERSGGPFGAVVFGPDHRIIAAAVNRVVPQTTSLAHAENMAYMLAQQRLQ 92

Query: 68  QEILPEV----DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA--- 120
              L +V     L  + +PC  C  A   A I RL  GA       +   TQF       
Sbjct: 93  TPRLNDVLAPVTLATSAQPCCQCYGATVWAGIDRLLIGARADDVMAL---TQFDEGPLPA 149

Query: 121 -----TCHHSPEIYPGISEQRSRQIIQDF 144
                      E+   +   ++  +++++
Sbjct: 150 DWVGELSRRGIEVVRDVLRDQACAVLRNY 178


>gi|258546002|ref|ZP_05706236.1| riboflavin biosynthesis protein RibD [Cardiobacterium hominis ATCC
           15826]
 gi|258518731|gb|EEV87590.1| riboflavin biosynthesis protein RibD [Cardiobacterium hominis ATCC
           15826]
          Length = 369

 Score = 83.4 bits (206), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 33/153 (21%), Positives = 53/153 (34%), Gaps = 21/153 (13%)

Query: 3   KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +   +M  ALE A+         P VG V V   + + +  +          HAE  A+R
Sbjct: 6   QDIPWMQAALELARQGIFSTAPNPRVGCVIVKGGEAVGKGFHVRAGE----PHAEAHALR 61

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
                           YV LEPC        CA A+  A + R+     +P       G 
Sbjct: 62  EAGAAARGAT-----AYVNLEPCAHQGRTPPCADALIAAGVARVVVACRDPNPLVAGQGI 116

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
                A      ++  G+ E+ ++ +   FF+ 
Sbjct: 117 ARLQAAG----IDVTEGVCEEEAQALNSGFFRR 145


>gi|27365734|ref|NP_761262.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Vibrio
           vulnificus CMCP6]
 gi|27361883|gb|AAO10789.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase [Vibrio
           vulnificus CMCP6]
          Length = 141

 Score = 83.4 bits (206), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 33/148 (22%), Positives = 50/148 (33%), Gaps = 25/148 (16%)

Query: 5   NVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
              M  ALE ++ A        PVG V V    I++    +         HAE+ A+   
Sbjct: 3   EEHMLRALEVSKFALPNCLPNPPVGCVLVKEGSIVAEGFTQKIGGN----HAEVQALEA- 57

Query: 63  CRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116
                   +  V  YVTLEPC        CAA +  + I+ +     +P       G Q 
Sbjct: 58  ----YSGDMDSVTAYVTLEPCSFIGRTPACAATLVKSGIKHVVVSILDPDPRNGGRGIQI 113

Query: 117 YTLATCHHSPEIYPGISEQRSRQIIQDF 144
              A      ++  G+        +  F
Sbjct: 114 LEQAG----VQVDIGL----CSSQVSAF 133


>gi|294678596|ref|YP_003579211.1| riboflavin biosynthesis protein RibD [Rhodobacter capsulatus SB
           1003]
 gi|294477416|gb|ADE86804.1| riboflavin biosynthesis protein RibD [Rhodobacter capsulatus SB
           1003]
          Length = 367

 Score = 83.4 bits (206), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 32/142 (22%), Positives = 44/142 (30%), Gaps = 25/142 (17%)

Query: 2   KKGNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57
           +    FM  AL  A        +   P VG V V   +I+ R   +         HAE  
Sbjct: 3   EADGRFMRLALGLAGRGL--GNVWPNPAVGCVIVNGGRIVGRGWTQPGGR----PHAERR 56

Query: 58  AIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIE 111
           A+                 YVTLEPC        CA A+  A + R+     +P      
Sbjct: 57  ALDQAGPAA-----RGATAYVTLEPCAHHGKTPPCAEALIAAGVVRVVSALEDPDPRVSG 111

Query: 112 NGTQFYTLATCHHSPEIYPGIS 133
            G      A       +  G+ 
Sbjct: 112 RGHAMLRAAG----IAVETGVL 129


>gi|296118298|ref|ZP_06836879.1| cytidine/deoxycytidylate deaminase, zinc-binding region
           [Corynebacterium ammoniagenes DSM 20306]
 gi|295968856|gb|EFG82100.1| cytidine/deoxycytidylate deaminase, zinc-binding region
           [Corynebacterium ammoniagenes DSM 20306]
          Length = 183

 Score = 83.4 bits (206), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 28/102 (27%), Positives = 41/102 (40%), Gaps = 2/102 (1%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRM 61
               F+   +E A  A    + P G++ V  +  ++    NR     D T H E    R 
Sbjct: 26  DERAFLRRCVELAHEALEAGDEPFGSILVSADGDVLFEDRNRV-ASGDNTQHPEFAIARW 84

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
               LS E       Y + E C MCAAA +   + R+ Y +S
Sbjct: 85  AAANLSPEERAVATAYTSGEHCPMCAAAHAWVGLGRIVYASS 126


>gi|328543537|ref|YP_004303646.1| Bifunctional: diaminohydroxyphosphoribosylaminopyrimidine deaminase
           (N-terminal); 5-amino-6-(5-phosphoribosylamino) uracil
           reductase [polymorphum gilvum SL003B-26A1]
 gi|326413281|gb|ADZ70344.1| Bifunctional: diaminohydroxyphosphoribosylaminopyrimidine deaminase
           (N-terminal); 5-amino-6-(5-phosphoribosylamino) uracil
           reductase [Polymorphum gilvum SL003B-26A1]
          Length = 388

 Score = 83.4 bits (206), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 34/149 (22%), Positives = 54/149 (36%), Gaps = 25/149 (16%)

Query: 4   GNVFMSCALEEAQNAALR-NEIP-VGAVAVLNNK----IISRAGNRNRELKDVTAHAEIL 57
              +M+ A+  A+    R    P VGA+ V +      ++ R             HAE+ 
Sbjct: 22  DRRYMAAAVALARRGLGRVWPNPSVGALIVADTGGAPVVVGRG----VTSPPGGPHAEVN 77

Query: 58  AIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIE 111
           A+R        +       YVTLEPC        C+AA+  A +RR+  G ++P      
Sbjct: 78  ALRQAG-----DRARGATCYVTLEPCSHHGRTPPCSAALVSAGVRRVVIGIADPNRRVSG 132

Query: 112 NGTQFYTLATCHHSPEIYPGISEQRSRQI 140
            G      A       +  G+     R +
Sbjct: 133 RGIGMLRDAG----IAVTVGVEAVACRDL 157


>gi|297621124|ref|YP_003709261.1| putative CMP/dCMP deaminase [Waddlia chondrophila WSU 86-1044]
 gi|297376425|gb|ADI38255.1| putative CMP/dCMP deaminase [Waddlia chondrophila WSU 86-1044]
          Length = 165

 Score = 83.4 bits (206), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 29/137 (21%), Positives = 54/137 (39%), Gaps = 9/137 (6%)

Query: 6   VFMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           +++   L  A+ +    + P  ++ V    +II+ A NR  E  +V AH EI   +    
Sbjct: 10  IYLERCLTLAEISLKSGDEPFASLLVNEKGEIIAEARNRINE-HNVLAHPEIELAQWAAN 68

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA---- 120
            L++       +Y T E C MCAAA  L  + ++ Y +S+ +          +       
Sbjct: 69  HLTRNKRKLTTMYTTGEHCPMCAAAHGLVGLGKIVYISSSAQLASWLKELNIHEPPINFI 128

Query: 121 ---TCHHSPEIYPGISE 134
                    ++   I+ 
Sbjct: 129 PIQEILPHTQVIGPIAA 145


>gi|325920349|ref|ZP_08182285.1| cytosine/adenosine deaminase [Xanthomonas gardneri ATCC 19865]
 gi|325549169|gb|EGD20087.1| cytosine/adenosine deaminase [Xanthomonas gardneri ATCC 19865]
          Length = 186

 Score = 83.4 bits (206), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 36/149 (24%), Positives = 61/149 (40%), Gaps = 17/149 (11%)

Query: 10  CALEEAQ-NAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
            A+E ++ N   R+  P GAV    +N+II+ A NR        AHAE +A  +  + L 
Sbjct: 33  LAIELSRMNVQERSGGPFGAVVFGPDNRIIAAAVNRVVPQTTSLAHAENMAYMLAQQRLQ 92

Query: 68  QEILPEV----DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC- 122
              L +V     L  + +PC  C  A   A I RL  GA       +   T+F       
Sbjct: 93  TPRLNDVLSPVTLATSAQPCCQCYGATVWAGIDRLLIGARAEDVMAL---TEFDEGPLPA 149

Query: 123 -------HHSPEIYPGISEQRSRQIIQDF 144
                      E+   +  +++  +++++
Sbjct: 150 DWVGELTRRGIEVVRDVHREQACAVLRNY 178


>gi|294625778|ref|ZP_06704397.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 11122]
 gi|294664496|ref|ZP_06729844.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 10535]
 gi|292599948|gb|EFF44066.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 11122]
 gi|292605729|gb|EFF49032.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 10535]
          Length = 186

 Score = 83.0 bits (205), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 36/149 (24%), Positives = 60/149 (40%), Gaps = 17/149 (11%)

Query: 10  CALEEAQ-NAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
            A+E ++ N   R+  P GAV    +++II+ A NR        AHAE +A  +  + L 
Sbjct: 33  LAIELSRMNVRERSGGPFGAVVFGPDHRIIAAAVNRVVPQTTSLAHAENMAYMLAQQRLQ 92

Query: 68  QEILPEV----DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA--- 120
              L +V     L  + +PC  C  A   A I RL  GA       +   TQF       
Sbjct: 93  TPRLNDVLSPVTLATSAQPCCQCYGATVWAGIDRLLIGARADDVMAL---TQFDEGPLPA 149

Query: 121 -----TCHHSPEIYPGISEQRSRQIIQDF 144
                      E+   +   ++  +++++
Sbjct: 150 DWVGELSRRGIEVVRDVLRDQACAVLRNY 178


>gi|240114937|ref|ZP_04728999.1| putative diaminohydroxyphosphoribosylaminopyrimidine deaminase
           [Neisseria gonorrhoeae PID18]
          Length = 361

 Score = 83.0 bits (205), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 34/153 (22%), Positives = 57/153 (37%), Gaps = 24/153 (15%)

Query: 8   MSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M  AL+ A       +  P VG V    ++I+ +  +          HAE+ A+R    +
Sbjct: 2   MENALDLADLGRFSTSPNPRVGCVIAHGSQIVGQGFHVKAGE----PHAEVHALRQAGEM 57

Query: 66  LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
                      +VTLEPC        CA A+  + + R+     +P       G      
Sbjct: 58  A-----KGATAFVTLEPCSHYGRTPPCAEALLRSGVTRVVAAMRDPNPPVAGKGLVLLKA 112

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDF---FKERR 149
           A      E   G+ E ++R++ + F    + RR
Sbjct: 113 AGI--KTEC--GLLENKARELNRGFLSRIERRR 141


>gi|161504399|ref|YP_001571511.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Salmonella enterica subsp. arizonae serovar
           62:z4,z23:-- str. RSK2980]
 gi|160865746|gb|ABX22369.1| hypothetical protein SARI_02510 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 367

 Score = 83.0 bits (205), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 36/155 (23%), Positives = 56/155 (36%), Gaps = 21/155 (13%)

Query: 3   KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +   +M+ AL+ AQ      +  P VG V V N +I+    ++         HAE+ A+R
Sbjct: 2   QDEFYMARALKLAQRGRFTTHPNPDVGCVIVNNGEIVGEGYHQRAGE----PHAEVHALR 57

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           M               YVTLEPC        C  A+  A + R+     +P       G 
Sbjct: 58  MAGAKAKGAT-----AYVTLEPCSHHGRTPPCCDALIAAGVARVVAAMQDPNPQVAGCGL 112

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
                A       +  G+    +  + + F K  R
Sbjct: 113 YRLQQAG----IAVSHGLMMSEAEALNKGFLKRMR 143


>gi|301335276|ref|ZP_07223520.1| riboflavin biosynthesis protein
           (diaminohydroxyphosphoribosylaminopyrimidine deaminase)
           [Chlamydia trachomatis L2tet1]
          Length = 375

 Score = 83.0 bits (205), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 32/150 (21%), Positives = 59/150 (39%), Gaps = 23/150 (15%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           ++   FM  A+   +   +    P   VG V V N  +I    ++       + HAE+ A
Sbjct: 6   EQQLFFMRKAVALGEKGRIFA-PPNPWVGCVIVKNGCVIGEGWHQGI----GSPHAEVCA 60

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
           ++       +  L   ++YVTLEPC        C   +  +++  +Y G  +P     + 
Sbjct: 61  VQ-----DQKCSLEGAEVYVTLEPCCHFGRTPPCVDLLIKSKVAAVYVGLLDPDPRVCKK 115

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQ 142
           G      A       +Y G+  Q ++  +Q
Sbjct: 116 GVARLQAAGIP----VYVGVGSQEAKTSLQ 141


>gi|238752768|ref|ZP_04614237.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Yersinia rohdei
           ATCC 43380]
 gi|238709026|gb|EEQ01275.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Yersinia rohdei
           ATCC 43380]
          Length = 369

 Score = 83.0 bits (205), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 35/157 (22%), Positives = 56/157 (35%), Gaps = 21/157 (13%)

Query: 1   MKKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           M+    +M+ A E A+      +  P VG V V + +I+    ++         HAE+ A
Sbjct: 1   MQPDEFYMARAFELARLGRFTTSPNPNVGCVLVRDGEIVGEGYHQRAGE----PHAEVHA 56

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
           +RM               +VTLEPC        CA A+  A + R+     +P       
Sbjct: 57  LRMAGEKAQ-----GATAFVTLEPCSHHGRTPPCADALVAAGVVRVVAAMQDPNPEVAGR 111

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
           G      A      ++  G+    +      F K  R
Sbjct: 112 GLYKLKQAG----IDVNHGLMLAEAEAANLGFLKRMR 144


>gi|15608547|ref|NP_215925.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino) uracil
           reductase [Mycobacterium tuberculosis H37Rv]
 gi|15840867|ref|NP_335904.1| riboflavin-specific deaminase [Mycobacterium tuberculosis CDC1551]
 gi|148661200|ref|YP_001282723.1| riboflavin-specific deaminase [Mycobacterium tuberculosis H37Ra]
 gi|148822629|ref|YP_001287383.1| bifunctional riboflavin biosynthesis protein ribG:
           diaminohydroxyphosphoribosylaminopyrimidine deaminase +
           5-amino-6-(5-phosphoribosylamino) uracil reductase
           [Mycobacterium tuberculosis F11]
 gi|167968448|ref|ZP_02550725.1| bifunctional riboflavin biosynthesis protein ribG:
           diaminohydroxyphosphoribosylaminopyrimidine deaminase +
           [Mycobacterium tuberculosis H37Ra]
 gi|215403256|ref|ZP_03415437.1| bifunctional riboflavin biosynthesis protein ribG:
           diaminohydroxyphosphoribosylaminopyrimidine deaminase +
           [Mycobacterium tuberculosis 02_1987]
 gi|215411054|ref|ZP_03419862.1| bifunctional riboflavin biosynthesis protein ribG:
           diaminohydroxyphosphoribosylaminopyrimidine deaminase +
           [Mycobacterium tuberculosis 94_M4241A]
 gi|215445596|ref|ZP_03432348.1| bifunctional riboflavin biosynthesis protein ribG:
           diaminohydroxyphosphoribosylaminopyrimidine deaminase +
           [Mycobacterium tuberculosis T85]
 gi|218753118|ref|ZP_03531914.1| bifunctional riboflavin biosynthesis protein ribG:
           diaminohydroxyphosphoribosylaminopyrimidine deaminase +
           [Mycobacterium tuberculosis GM 1503]
 gi|253799541|ref|YP_003032542.1| riboflavin biosynthesis protein ribG [Mycobacterium tuberculosis
           KZN 1435]
 gi|254231651|ref|ZP_04924978.1| bifunctional riboflavin biosynthesis protein ribG :
           diaminohydroxyphosphoribosylaminopyrimidine deaminase +
           5-amino-6-(5-phosphoribosylamino) uracil reductase
           [Mycobacterium tuberculosis C]
 gi|254364292|ref|ZP_04980338.1| bifunctional riboflavin biosynthesis protein ribG :
           diaminohydroxyphosphoribosylaminopyrimidine deaminase +
           5-amino-6-(5-phosphoribosylamino) uracil reductase
           [Mycobacterium tuberculosis str. Haarlem]
 gi|254550423|ref|ZP_05140870.1| riboflavin biosynthesis protein ribG [Mycobacterium tuberculosis
           '98-R604 INH-RIF-EM']
 gi|289554800|ref|ZP_06444010.1| riboflavin biosynthesis protein ribG [Mycobacterium tuberculosis
           KZN 605]
 gi|289745160|ref|ZP_06504538.1| riboflavin-specific deaminase [Mycobacterium tuberculosis 02_1987]
 gi|289757515|ref|ZP_06516893.1| riboflavin-specific deaminase [Mycobacterium tuberculosis T85]
 gi|289761568|ref|ZP_06520946.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase +
           5-amino-6-(5-phosphoribosylamino) uracil reductase
           [Mycobacterium tuberculosis GM 1503]
 gi|294994971|ref|ZP_06800662.1| riboflavin biosynthesis protein ribG [Mycobacterium tuberculosis
           210]
 gi|297633965|ref|ZP_06951745.1| riboflavin biosynthesis protein ribG [Mycobacterium tuberculosis
           KZN 4207]
 gi|297730954|ref|ZP_06960072.1| riboflavin biosynthesis protein ribG [Mycobacterium tuberculosis
           KZN R506]
 gi|298524915|ref|ZP_07012324.1| diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino) uracil
           reductase [Mycobacterium tuberculosis 94_M4241A]
 gi|313658287|ref|ZP_07815167.1| riboflavin biosynthesis protein ribG [Mycobacterium tuberculosis
           KZN V2475]
 gi|2829534|sp|P71677|RIBD_MYCTU RecName: Full=Riboflavin biosynthesis protein RibD; Includes:
           RecName:
           Full=Diaminohydroxyphosphoribosylaminopyrimidine
           deaminase; Short=DRAP deaminase; AltName:
           Full=Riboflavin-specific deaminase; Includes: RecName:
           Full=5-amino-6-(5-phosphoribosylamino)uracil reductase;
           AltName: Full=HTP reductase
 gi|1542917|emb|CAB02188.1| PROBABLE BIFUNCTIONAL riboflavin biosynthesis protein RIBG :
           Diaminohydroxyphosphoribosylaminopyrimidine deaminase
           (Riboflavin-specific deaminase) +
           5-amino-6-(5-phosphoribosylamino) uracil reductase (HTP
           reductase) [Mycobacterium tuberculosis H37Rv]
 gi|13881067|gb|AAK45718.1| riboflavin-specific deaminase [Mycobacterium tuberculosis CDC1551]
 gi|124600710|gb|EAY59720.1| bifunctional riboflavin biosynthesis protein ribG :
           diaminohydroxyphosphoribosylaminopyrimidine deaminase +
           5-amino-6-(5-phosphoribosylamino) uracil reductase
           [Mycobacterium tuberculosis C]
 gi|134149806|gb|EBA41851.1| bifunctional riboflavin biosynthesis protein ribG :
           diaminohydroxyphosphoribosylaminopyrimidine deaminase +
           5-amino-6-(5-phosphoribosylamino) uracil reductase
           [Mycobacterium tuberculosis str. Haarlem]
 gi|148505352|gb|ABQ73161.1| riboflavin-specific deaminase [Mycobacterium tuberculosis H37Ra]
 gi|148721156|gb|ABR05781.1| bifunctional riboflavin biosynthesis protein ribG:
           diaminohydroxyphosphoribosylaminopyrimidine deaminase +
           5-amino-6-(5-phosphoribosylamino) uracil reductase
           [Mycobacterium tuberculosis F11]
 gi|253321044|gb|ACT25647.1| riboflavin biosynthesis protein ribG [Mycobacterium tuberculosis
           KZN 1435]
 gi|289439432|gb|EFD21925.1| riboflavin biosynthesis protein ribG [Mycobacterium tuberculosis
           KZN 605]
 gi|289685688|gb|EFD53176.1| riboflavin-specific deaminase [Mycobacterium tuberculosis 02_1987]
 gi|289709074|gb|EFD73090.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase +
           5-amino-6-(5-phosphoribosylamino) uracil reductase
           [Mycobacterium tuberculosis GM 1503]
 gi|289713079|gb|EFD77091.1| riboflavin-specific deaminase [Mycobacterium tuberculosis T85]
 gi|298494709|gb|EFI30003.1| diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino) uracil
           reductase [Mycobacterium tuberculosis 94_M4241A]
 gi|323720073|gb|EGB29179.1| riboflavin biosynthesis protein ribG [Mycobacterium tuberculosis
           CDC1551A]
 gi|326903030|gb|EGE49963.1| riboflavin biosynthesis protein ribG [Mycobacterium tuberculosis
           W-148]
 gi|328459289|gb|AEB04712.1| riboflavin biosynthesis protein ribG [Mycobacterium tuberculosis
           KZN 4207]
          Length = 339

 Score = 83.0 bits (205), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 30/133 (22%), Positives = 56/133 (42%), Gaps = 22/133 (16%)

Query: 25  PVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83
           PVGAV V  N +I+   G           HAE++A+R    +          + VT+EPC
Sbjct: 32  PVGAVIVDPNGRIVGAGGTEPAGGD----HAEVVALRRAGGLA-----AGAIVVVTMEPC 82

Query: 84  ------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQR- 136
                   C  A+  AR+  + Y  ++P  G    G    + A      ++  G+  ++ 
Sbjct: 83  NHYGKTPPCVNALIEARVGTVVYAVADPN-GIAGGGAGRLSAAGL----QVRSGVLAEQV 137

Query: 137 SRQIIQDFFKERR 149
           +   ++++  ++R
Sbjct: 138 AAGPLREWLHKQR 150


>gi|308231834|ref|ZP_07663946.1| riboflavin biosynthesis protein ribG [Mycobacterium tuberculosis
           SUMu001]
 gi|308369792|ref|ZP_07419077.2| riboflavin biosynthesis protein ribG [Mycobacterium tuberculosis
           SUMu002]
 gi|308370712|ref|ZP_07666996.1| riboflavin biosynthesis protein ribG [Mycobacterium tuberculosis
           SUMu003]
 gi|308371959|ref|ZP_07667277.1| riboflavin biosynthesis protein ribG [Mycobacterium tuberculosis
           SUMu004]
 gi|308373132|ref|ZP_07667517.1| riboflavin biosynthesis protein ribG [Mycobacterium tuberculosis
           SUMu005]
 gi|308374304|ref|ZP_07667756.1| riboflavin biosynthesis protein ribG [Mycobacterium tuberculosis
           SUMu006]
 gi|308375454|ref|ZP_07668025.1| riboflavin biosynthesis protein ribG [Mycobacterium tuberculosis
           SUMu007]
 gi|308376713|ref|ZP_07668330.1| riboflavin biosynthesis protein ribG [Mycobacterium tuberculosis
           SUMu008]
 gi|308377721|ref|ZP_07480168.2| riboflavin biosynthesis protein ribG [Mycobacterium tuberculosis
           SUMu009]
 gi|308378931|ref|ZP_07668864.1| riboflavin biosynthesis protein ribG [Mycobacterium tuberculosis
           SUMu010]
 gi|308380068|ref|ZP_07669113.1| riboflavin biosynthesis protein ribG [Mycobacterium tuberculosis
           SUMu011]
 gi|308215903|gb|EFO75302.1| riboflavin biosynthesis protein ribG [Mycobacterium tuberculosis
           SUMu001]
 gi|308326399|gb|EFP15250.1| riboflavin biosynthesis protein ribG [Mycobacterium tuberculosis
           SUMu002]
 gi|308331085|gb|EFP19936.1| riboflavin biosynthesis protein ribG [Mycobacterium tuberculosis
           SUMu003]
 gi|308334898|gb|EFP23749.1| riboflavin biosynthesis protein ribG [Mycobacterium tuberculosis
           SUMu004]
 gi|308338707|gb|EFP27558.1| riboflavin biosynthesis protein ribG [Mycobacterium tuberculosis
           SUMu005]
 gi|308342394|gb|EFP31245.1| riboflavin biosynthesis protein ribG [Mycobacterium tuberculosis
           SUMu006]
 gi|308346232|gb|EFP35083.1| riboflavin biosynthesis protein ribG [Mycobacterium tuberculosis
           SUMu007]
 gi|308350184|gb|EFP39035.1| riboflavin biosynthesis protein ribG [Mycobacterium tuberculosis
           SUMu008]
 gi|308354825|gb|EFP43676.1| riboflavin biosynthesis protein ribG [Mycobacterium tuberculosis
           SUMu009]
 gi|308358776|gb|EFP47627.1| riboflavin biosynthesis protein ribG [Mycobacterium tuberculosis
           SUMu010]
 gi|308362713|gb|EFP51564.1| riboflavin biosynthesis protein ribG [Mycobacterium tuberculosis
           SUMu011]
          Length = 337

 Score = 83.0 bits (205), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 30/133 (22%), Positives = 56/133 (42%), Gaps = 22/133 (16%)

Query: 25  PVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83
           PVGAV V  N +I+   G           HAE++A+R    +          + VT+EPC
Sbjct: 30  PVGAVIVDPNGRIVGAGGTEPAGGD----HAEVVALRRAGGLA-----AGAIVVVTMEPC 80

Query: 84  ------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQR- 136
                   C  A+  AR+  + Y  ++P  G    G    + A      ++  G+  ++ 
Sbjct: 81  NHYGKTPPCVNALIEARVGTVVYAVADPN-GIAGGGAGRLSAAGL----QVRSGVLAEQV 135

Query: 137 SRQIIQDFFKERR 149
           +   ++++  ++R
Sbjct: 136 AAGPLREWLHKQR 148


>gi|84502762|ref|ZP_01000881.1| riboflavin biosynthesis protein RibD [Oceanicola batsensis
           HTCC2597]
 gi|84389157|gb|EAQ01955.1| riboflavin biosynthesis protein RibD [Oceanicola batsensis
           HTCC2597]
          Length = 367

 Score = 83.0 bits (205), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 32/150 (21%), Positives = 49/150 (32%), Gaps = 21/150 (14%)

Query: 4   GNVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
              F+S AL   +    R      VG V V + +I+ R             HAE  A+  
Sbjct: 6   DRRFLSLALALGRRGLGRTWPNPSVGCVIVRDGRIVGRGWTAPGGR----PHAEPQALAQ 61

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
                          YV+LEPC        C  A+  A I R+    ++        G +
Sbjct: 62  AGEAA-----RGATAYVSLEPCAHHGKTPPCTEALIAAGIARVVAPLADTDPRVAGQGFE 116

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
               A      E+  G+  + + +    FF
Sbjct: 117 RLRWAG----IEVSTGLLGEEAARDHAGFF 142


>gi|170017119|ref|YP_001728038.1| riboflavin biosynthesis protein RibD [Leuconostoc citreum KM20]
 gi|169803976|gb|ACA82594.1| Riboflavin biosynthesis protein RibD [Leuconostoc citreum KM20]
          Length = 347

 Score = 83.0 bits (205), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 34/126 (26%), Positives = 53/126 (42%), Gaps = 20/126 (15%)

Query: 23  EIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81
           E P VGA+ V N +I++   + +       AHAEI A      +  Q  + +  +YVTLE
Sbjct: 24  ENPRVGAIIVKNGQILATGYHHSFGA----AHAEINAFEN---LRDQTDIVDSTMYVTLE 76

Query: 82  PCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQ 135
           PC +      CA AI+   ++R+  G+ +P          F   A       I   +   
Sbjct: 77  PCFVTGKVGACALAIAQWGVKRVVVGSFDPNPDTHGRSVTFLRQAG------IRVDVLGT 130

Query: 136 RSRQII 141
              QI+
Sbjct: 131 EDSQIL 136


>gi|166154072|ref|YP_001654190.1| riboflavin biosynthesis protein
           (diaminohydroxyphosphoribosylaminopyrimidine deaminase)
           [Chlamydia trachomatis 434/Bu]
 gi|166154947|ref|YP_001653202.1| riboflavin biosynthesis protein
           (diaminohydroxyphosphoribosylaminopyrimidine deaminase)
           [Chlamydia trachomatis L2b/UCH-1/proctitis]
 gi|165930060|emb|CAP03543.1| Riboflavin biosynthesis protein
           (diaminohydroxyphosphoribosylaminopyrimidine deaminase)
           [Chlamydia trachomatis 434/Bu]
 gi|165930935|emb|CAP06497.1| Riboflavin biosynthesis protein
           (diaminohydroxyphosphoribosylaminopyrimidine deaminase)
           [Chlamydia trachomatis L2b/UCH-1/proctitis]
          Length = 375

 Score = 83.0 bits (205), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 32/150 (21%), Positives = 59/150 (39%), Gaps = 23/150 (15%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           ++   FM  A+   +   +    P   VG V V N  +I    ++       + HAE+ A
Sbjct: 6   EQQLFFMRKAVALGEKGRIFA-PPNPWVGCVIVKNGCVIGEGWHQGI----GSPHAEVCA 60

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
           ++       +  L   ++YVTLEPC        C   +  +++  +Y G  +P     + 
Sbjct: 61  VQ-----DQKCSLEGAEVYVTLEPCCHFGRTPPCVDLLIKSKVAAVYVGLLDPDPRVCKK 115

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQ 142
           G      A       +Y G+  Q ++  +Q
Sbjct: 116 GVARLQAAGIP----VYVGVGSQEAKTSLQ 141


>gi|116610344|gb|ABK03068.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Arthrobacter sp.
           FB24]
          Length = 386

 Score = 83.0 bits (205), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 35/147 (23%), Positives = 53/147 (36%), Gaps = 18/147 (12%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  AL+ A          VGAV +  + + +    +R       TAHAE  AI    R  
Sbjct: 1   MDAALDAALLGPRGANPLVGAVVIGPDGRQLVTGYHR----GAGTAHAEADAIAQAGR-- 54

Query: 67  SQEILPEVDLYVTLEPCTMC------AAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
               L    + VTLEPC  C      A AI  A I  + Y   +P               
Sbjct: 55  QGLDLTGSTMVVTLEPCNHCGRTGPCAQAIIDAGIASVVYAVDDPHDPAAGGAATLRAA- 113

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKE 147
                  +  G+S + + ++ + +F+ 
Sbjct: 114 ----GVSVRSGLSARAAFELNRRWFEA 136


>gi|218767600|ref|YP_002342112.1| putative diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/phosphoribosylamino)uracil reductase
           [Neisseria meningitidis Z2491]
 gi|121051608|emb|CAM07908.1| putative diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/phosphoribosylamino)uracil reductase
           [Neisseria meningitidis Z2491]
          Length = 369

 Score = 83.0 bits (205), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 34/159 (21%), Positives = 56/159 (35%), Gaps = 24/159 (15%)

Query: 2   KKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
                 M  AL  A       +  P VG V    ++I+ +  +          HAE+ A+
Sbjct: 4   DTDISMMENALRLAALGRFSTSPNPRVGCVIAHGSQIVGQGFHVKAGE----PHAEVHAL 59

Query: 60  RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113
           R    +           +VTLEPC        CA A+  + + R+     +P       G
Sbjct: 60  RQAGEMAQ-----GATAFVTLEPCSHYGRTPPCAEALLRSGVTRVVAAMRDPNPLVAGKG 114

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDF---FKERR 149
                 A      E   G+ E ++R++ + F    + RR
Sbjct: 115 LAMLEAAGI--KTEC--GLLEHQARELNRGFLSRIERRR 149


>gi|76789470|ref|YP_328556.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Chlamydia
           trachomatis A/HAR-13]
 gi|76168000|gb|AAX51008.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Chlamydia
           trachomatis A/HAR-13]
          Length = 375

 Score = 83.0 bits (205), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 31/150 (20%), Positives = 59/150 (39%), Gaps = 23/150 (15%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           ++   FM  A+   +   +    P   VG V V N  +I    ++       + HAE+ A
Sbjct: 6   EQQLFFMRKAVALGEKGRIFA-PPNPWVGCVIVKNGGVIGEGWHQGI----GSPHAEVCA 60

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
           ++       +  L   +++VTLEPC        C   +  +++  +Y G  +P     + 
Sbjct: 61  VQ-----DQKCSLEGAEVFVTLEPCCHFGRTPPCVDLLIKSKVAAVYVGLLDPDPRVCKK 115

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQ 142
           G      A       +Y G+  Q ++  +Q
Sbjct: 116 GVARLQAAGIP----VYVGVGSQEAKTSLQ 141


>gi|256113297|ref|ZP_05454165.1| riboflavin biosynthesis protein RibD [Brucella melitensis bv. 3
           str. Ether]
 gi|265994710|ref|ZP_06107267.1| riboflavin biosynthesis protein RibD [Brucella melitensis bv. 3
           str. Ether]
 gi|262765823|gb|EEZ11612.1| riboflavin biosynthesis protein RibD [Brucella melitensis bv. 3
           str. Ether]
          Length = 373

 Score = 83.0 bits (205), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 31/145 (21%), Positives = 47/145 (32%), Gaps = 21/145 (14%)

Query: 3   KGNVFMSCALEEAQ--NAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
               FM   +  A+           VG + V +  I+ R             HAE  A+ 
Sbjct: 14  NDLRFMEATIRYARRHKGLTGTNPSVGTIIVKDGVIVGRG----VTALGGRPHAEPQALA 69

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
                           YVTLEPC        CA A+  + + R+   A++P       G 
Sbjct: 70  EVGEAA-----RGATAYVTLEPCAHHGRTPPCAEALVRSGVARVVVAATDPDERVSGKGF 124

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQ 139
                A      E+ PGI  +++  
Sbjct: 125 AILREAG----IEVVPGILSEQAAD 145


>gi|161830108|ref|YP_001596350.1| cytidine/deoxycytidylate deaminase family protein [Coxiella
           burnetii RSA 331]
 gi|161761975|gb|ABX77617.1| cytidine/deoxycytidylate deaminase family protein [Coxiella
           burnetii RSA 331]
          Length = 151

 Score = 83.0 bits (205), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 25/91 (27%), Positives = 33/91 (36%), Gaps = 16/91 (17%)

Query: 41  GNRNRELKDVTAHAEILAIRMGCRILSQEIL----------------PEVDLYVTLEPCT 84
            N + +  D TAHAE+  IR   R L+   L                    +Y + EPC 
Sbjct: 19  HNHSVDWHDPTAHAEMSVIRKAARELNVTDLGHIRKEDSKLSQPSEWSHCVIYSSAEPCP 78

Query: 85  MCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
           MC AAI  A I  L + A+            
Sbjct: 79  MCMAAIYWAGIHYLVFSATRYDTAAPGVNWD 109


>gi|325206734|gb|ADZ02187.1| riboflavin biosynthesis protein RibD [Neisseria meningitidis
           M04-240196]
          Length = 369

 Score = 83.0 bits (205), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 34/159 (21%), Positives = 56/159 (35%), Gaps = 24/159 (15%)

Query: 2   KKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
                 M  AL  A       +  P VG V    ++I+ +  +          HAE+ A+
Sbjct: 4   DTDISMMENALRLAALGRFSTSPNPRVGCVIAHGSQIVGQGFHVKAGE----PHAEVHAL 59

Query: 60  RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113
           R    +           +VTLEPC        CA A+  + + R+     +P       G
Sbjct: 60  RQAGEMAQ-----GATAFVTLEPCSHYGRTPPCAEALLRSGVTRVVAAMRDPNPPVAGKG 114

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDF---FKERR 149
                 A      E   G+ E ++R++ + F    + RR
Sbjct: 115 FAMLEAAGI--KTEC--GLLEHQARELNRGFLSRIERRR 149


>gi|319794177|ref|YP_004155817.1| riboflavin biosynthesis protein ribd [Variovorax paradoxus EPS]
 gi|315596640|gb|ADU37706.1| riboflavin biosynthesis protein RibD [Variovorax paradoxus EPS]
          Length = 375

 Score = 83.0 bits (205), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 35/155 (22%), Positives = 59/155 (38%), Gaps = 19/155 (12%)

Query: 2   KKGNVFMSCALEEAQNAALRNEI-P-VGAVAVL-NNKIISRAGNRNRELKDVTAHAEILA 58
           ++    ++ AL  A +A L  +  P VG V      +++ +   +         HAE++A
Sbjct: 5   EQDAQHIATALRLASDALLLTDPNPRVGCVLCDAEGRVLGQGHTQKAGG----PHAEVMA 60

Query: 59  IRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIEN 112
           +R          +     YVTLEPC+       C  A+  A I R+    ++P       
Sbjct: 61  LRDAAAQGHS--VEGATAYVTLEPCSHHGRTGPCCDALIAAGIERVVASLADPNPLVAGQ 118

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
           G +    A      E+  G     SR++   FF  
Sbjct: 119 GFERLRAAG----VEVEVGPGADESRELNIGFFSR 149


>gi|17987472|ref|NP_540106.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Brucella melitensis bv. 1 str. 16M]
 gi|256044453|ref|ZP_05447357.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Brucella melitensis bv. 1 str. Rev.1]
 gi|260563804|ref|ZP_05834290.1| riboflavin biosynthesis protein RibD [Brucella melitensis bv. 1
           str. 16M]
 gi|265990874|ref|ZP_06103431.1| riboflavin biosynthesis protein RibD [Brucella melitensis bv. 1
           str. Rev.1]
 gi|17983168|gb|AAL52370.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Brucella melitensis bv. 1 str. 16M]
 gi|260153820|gb|EEW88912.1| riboflavin biosynthesis protein RibD [Brucella melitensis bv. 1
           str. 16M]
 gi|263001658|gb|EEZ14233.1| riboflavin biosynthesis protein RibD [Brucella melitensis bv. 1
           str. Rev.1]
          Length = 373

 Score = 83.0 bits (205), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 31/145 (21%), Positives = 47/145 (32%), Gaps = 21/145 (14%)

Query: 3   KGNVFMSCALEEAQ--NAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
               FM   +  A+           VG + V +  I+ R             HAE  A+ 
Sbjct: 14  NDLRFMEATIRYARRHKGLTGTNPSVGTIIVKDGVIVGRG----VTALGGRPHAEPQALA 69

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
                           YVTLEPC        CA A+  + + R+   A++P       G 
Sbjct: 70  EVGEAA-----RGATAYVTLEPCAHHGRTPPCAEALVRSGVARVVVAATDPDERVSGKGF 124

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQ 139
                A      E+ PGI  +++  
Sbjct: 125 AILREAG----IEVVPGILSEQAAD 145


>gi|255349125|ref|ZP_05381132.1| riboflavin biosynthesis protein
           (diaminohydroxyphosphoribosylaminopyrimidine deaminase)
           [Chlamydia trachomatis 70]
 gi|255503662|ref|ZP_05382052.1| riboflavin biosynthesis protein
           (diaminohydroxyphosphoribosylaminopyrimidine deaminase)
           [Chlamydia trachomatis 70s]
 gi|255507341|ref|ZP_05382980.1| riboflavin biosynthesis protein
           (diaminohydroxyphosphoribosylaminopyrimidine deaminase)
           [Chlamydia trachomatis D(s)2923]
 gi|289525774|emb|CBJ15255.1| Riboflavin biosynthesis protein
           (diaminohydroxyphosphoribosylaminopyrimidine deaminase)
           [Chlamydia trachomatis Sweden2]
 gi|296435349|gb|ADH17527.1| riboflavin biosynthesis protein
           (diaminohydroxyphosphoribosylaminopyrimidine deaminase)
           [Chlamydia trachomatis E/150]
 gi|296439066|gb|ADH21219.1| riboflavin biosynthesis protein
           (diaminohydroxyphosphoribosylaminopyrimidine deaminase)
           [Chlamydia trachomatis E/11023]
          Length = 375

 Score = 83.0 bits (205), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 32/150 (21%), Positives = 59/150 (39%), Gaps = 23/150 (15%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           ++   FM  A+   +   +    P   VG V V N  +I    ++       + HAE+ A
Sbjct: 6   EQQLFFMRKAVALGEKGRIFA-PPNPWVGCVIVKNGCVIGEGWHQGI----GSPHAEVCA 60

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
           ++       +  L   ++YVTLEPC        C   +  +++  +Y G  +P     + 
Sbjct: 61  VQ-----DQKCSLEGAEVYVTLEPCCHFGRTPPCVDLLIKSKVAAVYVGLLDPDPRVCKK 115

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQ 142
           G      A       +Y G+  Q ++  +Q
Sbjct: 116 GVARLQAAGIP----VYVGVGSQEAKTSLQ 141


>gi|294852128|ref|ZP_06792801.1| riboflavin biosynthesis protein RibD [Brucella sp. NVSL 07-0026]
 gi|294820717|gb|EFG37716.1| riboflavin biosynthesis protein RibD [Brucella sp. NVSL 07-0026]
          Length = 373

 Score = 82.7 bits (204), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 31/145 (21%), Positives = 47/145 (32%), Gaps = 21/145 (14%)

Query: 3   KGNVFMSCALEEAQ--NAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
               FM   +  A+           VG + V +  I+ R             HAE  A+ 
Sbjct: 14  NDLRFMEATIRYARRHKGLTGTNPSVGTIIVKDGVIVGRG----VTALGGRPHAEPQALA 69

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
                           YVTLEPC        CA A+  + + R+   A++P       G 
Sbjct: 70  EVGEAA-----RGATAYVTLEPCAHHGRTPPCAEALVRSGVARVVVAATDPDERVSGKGF 124

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQ 139
                A      E+ PGI  +++  
Sbjct: 125 AILREAG----IEVVPGILSEQAAD 145


>gi|240079985|ref|ZP_04724528.1| putative diaminohydroxyphosphoribosylaminopyrimidine deaminase
           [Neisseria gonorrhoeae FA19]
 gi|268596126|ref|ZP_06130293.1| riboflavin biosynthesis protein RibD [Neisseria gonorrhoeae FA19]
 gi|268549914|gb|EEZ44933.1| riboflavin biosynthesis protein RibD [Neisseria gonorrhoeae FA19]
          Length = 369

 Score = 82.7 bits (204), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 34/153 (22%), Positives = 55/153 (35%), Gaps = 24/153 (15%)

Query: 8   MSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M  AL  A       +  P VG V     +I+ +  +          HAE+ A+R    +
Sbjct: 10  MENALRLAALGRFSTSPNPRVGCVIAHGRQIVGQGFHVKAGE----PHAEVHALRQAGEM 65

Query: 66  LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
                      +VTLEPC        CA A+  + + R+     +P       G      
Sbjct: 66  A-----KGATAFVTLEPCSHYGRTPPCAEALLRSGVTRVVAAMRDPNPPVAGKGLVLLKA 120

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDF---FKERR 149
           A      E   G+ E ++R++ + F    + RR
Sbjct: 121 AGI--KTEC--GLLENKARELNRGFLSRIERRR 149


>gi|317485112|ref|ZP_07943994.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Bilophila wadsworthia 3_1_6]
 gi|316923647|gb|EFV44851.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Bilophila wadsworthia 3_1_6]
          Length = 194

 Score = 82.7 bits (204), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 23/103 (22%), Positives = 38/103 (36%), Gaps = 1/103 (0%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIR 60
           +K    +   ++    +      P G V      +++    N      D  AH E+   R
Sbjct: 24  EKDIELLRKGIQAGFKSLAYGNEPYGCVLAGPSGELLLEGLNTCLTEHDPLAHGEMNLCR 83

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
              +    E L +  +YV   PC+MC  AI    I R+ +  S
Sbjct: 84  EAAQKYDPEFLWQCSIYVPGSPCSMCTCAIFYTNIGRIVHATS 126


>gi|50954248|ref|YP_061536.1| riboflavin-specific deaminase [Leifsonia xyli subsp. xyli str.
           CTCB07]
 gi|50950730|gb|AAT88431.1| riboflavin-specific deaminase [Leifsonia xyli subsp. xyli str.
           CTCB07]
          Length = 341

 Score = 82.7 bits (204), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 37/148 (25%), Positives = 56/148 (37%), Gaps = 27/148 (18%)

Query: 8   MSCALEEAQNAALRNEIP-VGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M  AL  A N       P VG V +  + + I++  +R       T HAE  A+      
Sbjct: 7   MRAALRLAANGPAAGVNPRVGCVLLDADGRTIAKGFHR----GAGTPHAEADAL----GK 58

Query: 66  LSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP---KGGGIENGTQF 116
           L +         VTLEPC        C+ A+  A + R+ YG ++P     GG E   Q 
Sbjct: 59  LPEGGARGTTAVVTLEPCNHWGRTGPCSEALLDAGVARVVYGIADPGERSRGGAERLRQ- 117

Query: 117 YTLATCHHSPEIYPGISEQRSRQIIQDF 144
                     E+  G+      + + D+
Sbjct: 118 -------GGVEVTGGVLAAEIEEFLDDW 138


>gi|256369199|ref|YP_003106707.1| riboflavin biosynthesis protein RibD [Brucella microti CCM 4915]
 gi|255999359|gb|ACU47758.1| riboflavin biosynthesis protein RibD [Brucella microti CCM 4915]
          Length = 373

 Score = 82.7 bits (204), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 31/145 (21%), Positives = 47/145 (32%), Gaps = 21/145 (14%)

Query: 3   KGNVFMSCALEEAQ--NAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
               FM   +  A+           VG + V +  I+ R             HAE  A+ 
Sbjct: 14  NDLRFMEATIRYARRHKGLTGTNPSVGTIIVKDGVIVGRG----VTALGGRPHAEPQALA 69

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
                           YVTLEPC        CA A+  + + R+   A++P       G 
Sbjct: 70  EVGEAA-----RGATAYVTLEPCAHHGRTPPCAEALVRSGVARVVVAATDPDERVSGKGF 124

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQ 139
                A      E+ PGI  +++  
Sbjct: 125 AILREAG----IEVVPGILSEQAAD 145


>gi|254701540|ref|ZP_05163368.1| riboflavin biosynthesis protein RibD [Brucella suis bv. 5 str. 513]
 gi|261752090|ref|ZP_05995799.1| riboflavin biosynthesis protein RibD [Brucella suis bv. 5 str. 513]
 gi|261741843|gb|EEY29769.1| riboflavin biosynthesis protein RibD [Brucella suis bv. 5 str. 513]
          Length = 373

 Score = 82.7 bits (204), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 31/145 (21%), Positives = 47/145 (32%), Gaps = 21/145 (14%)

Query: 3   KGNVFMSCALEEAQ--NAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
               FM   +  A+           VG + V +  I+ R             HAE  A+ 
Sbjct: 14  NDLRFMEATIRYARRHKGLTGTNPSVGTIIVKDGVIVGRG----VTALGGRPHAEPQALA 69

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
                           YVTLEPC        CA A+  + + R+   A++P       G 
Sbjct: 70  EVGEAA-----RGATAYVTLEPCAHHGRTPPCAEALVRSGVARVVVAATDPDERVSGKGF 124

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQ 139
                A      E+ PGI  +++  
Sbjct: 125 AILREAG----IEVVPGILSEQAAD 145


>gi|332530146|ref|ZP_08406095.1| riboflavin biosynthesis protein RibD [Hylemonella gracilis ATCC
           19624]
 gi|332040416|gb|EGI76793.1| riboflavin biosynthesis protein RibD [Hylemonella gracilis ATCC
           19624]
          Length = 377

 Score = 82.7 bits (204), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 37/149 (24%), Positives = 55/149 (36%), Gaps = 19/149 (12%)

Query: 8   MSCALEEAQNA-ALRNEIP-VGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           M  AL  A+    L +  P VG V V    +++     +         HAE++A+R    
Sbjct: 7   MQRALALAEQGLYLTSPNPRVGCVIVGVEGQLLGEGHTQRAGG----PHAEVMALRDAQA 62

Query: 65  ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
                       YVTLEPC        C  A++ A I ++     +P       G  F  
Sbjct: 63  RGHDVR--GATAYVTLEPCAHQGRTGPCCEALAAAGIGKVVASLEDPNPKVAGQG--FAR 118

Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKE 147
           L       E+ PG    +SR++   FF  
Sbjct: 119 LRAAGVVVEVGPG--AAQSRELNLGFFSR 145


>gi|240015845|ref|ZP_04722385.1| putative diaminohydroxyphosphoribosylaminopyrimidine deaminase
           [Neisseria gonorrhoeae FA6140]
 gi|240117225|ref|ZP_04731287.1| putative diaminohydroxyphosphoribosylaminopyrimidine deaminase
           [Neisseria gonorrhoeae PID1]
 gi|240120474|ref|ZP_04733436.1| putative diaminohydroxyphosphoribosylaminopyrimidine deaminase
           [Neisseria gonorrhoeae PID24-1]
 gi|240122774|ref|ZP_04735730.1| putative diaminohydroxyphosphoribosylaminopyrimidine deaminase
           [Neisseria gonorrhoeae PID332]
 gi|254492997|ref|ZP_05106168.1| riboflavin biosynthesis protein RibD [Neisseria gonorrhoeae 1291]
 gi|268598251|ref|ZP_06132418.1| riboflavin biosynthesis protein RibD [Neisseria gonorrhoeae MS11]
 gi|268602915|ref|ZP_06137082.1| riboflavin biosynthesis protein RibD [Neisseria gonorrhoeae PID1]
 gi|268681384|ref|ZP_06148246.1| riboflavin biosynthesis protein RibD [Neisseria gonorrhoeae PID332]
 gi|226512037|gb|EEH61382.1| riboflavin biosynthesis protein RibD [Neisseria gonorrhoeae 1291]
 gi|268582382|gb|EEZ47058.1| riboflavin biosynthesis protein RibD [Neisseria gonorrhoeae MS11]
 gi|268587046|gb|EEZ51722.1| riboflavin biosynthesis protein RibD [Neisseria gonorrhoeae PID1]
 gi|268621668|gb|EEZ54068.1| riboflavin biosynthesis protein RibD [Neisseria gonorrhoeae PID332]
          Length = 369

 Score = 82.7 bits (204), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 34/153 (22%), Positives = 55/153 (35%), Gaps = 24/153 (15%)

Query: 8   MSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M  AL  A       +  P VG V     +I+ +  +          HAE+ A+R    +
Sbjct: 10  MENALRLAALGRFSTSPNPRVGCVIAHGRQIVGQGFHVKAGE----PHAEVHALRQAGEM 65

Query: 66  LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
                      +VTLEPC        CA A+  + + R+     +P       G      
Sbjct: 66  A-----KGATAFVTLEPCSHYGRTPPCAEALLRSGVTRVVAAMRDPNPPVAGKGLVLLKA 120

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDF---FKERR 149
           A      E   G+ E ++R++ + F    + RR
Sbjct: 121 AGI--KTEC--GLLENKARELNRGFLSRIERRR 149


>gi|163759204|ref|ZP_02166290.1| riboflavin-specific deaminase / reductase [Hoeflea phototrophica
           DFL-43]
 gi|162283608|gb|EDQ33893.1| riboflavin-specific deaminase / reductase [Hoeflea phototrophica
           DFL-43]
          Length = 379

 Score = 82.7 bits (204), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 33/148 (22%), Positives = 52/148 (35%), Gaps = 25/148 (16%)

Query: 4   GNVFMSCALEEAQ-NAALRNEIP-VGAVAVL--NNK--IISRAGNRNRELKDVTAHAEIL 57
              FM+ A+  A+ +       P V  + V   N++  I+ R             HAE  
Sbjct: 19  DRRFMAAAIRLARWHQGRTGSNPSVATLIVREINDEPVIVGRGVTAVGGR----PHAEPQ 74

Query: 58  AIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIE 111
           A+     +           YVTLEPC        CA A+  A + R+   AS+P      
Sbjct: 75  ALAEAGDLA-----RGATAYVTLEPCAHHGRTPPCAEALVSAGVSRVVAAASDPDDRVSG 129

Query: 112 NGTQFYTLATCHHSPEIYPGISEQRSRQ 139
            G Q    A      E+   +  + + +
Sbjct: 130 RGYQILRDA----RIEVEENVLAEEAAR 153


>gi|329947524|ref|ZP_08294716.1| guanine deaminase family protein [Actinomyces sp. oral taxon 170
           str. F0386]
 gi|328524214|gb|EGF51287.1| guanine deaminase family protein [Actinomyces sp. oral taxon 170
           str. F0386]
          Length = 160

 Score = 82.7 bits (204), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 31/120 (25%), Positives = 45/120 (37%), Gaps = 5/120 (4%)

Query: 1   MKKGNVFMSCALEEAQN----AALRNEIPVGAVAVLNNKIISR-AGNRNRELKDVTAHAE 55
           M+    F+   + +A            +P   V V   + IS    NR +E  D +AHAE
Sbjct: 1   MQTMTRFLEQLMAQAVIRSITHVESGGLPFVGVIVDGQQAISEFGVNRVQETGDPSAHAE 60

Query: 56  ILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
           I+AIR       +  L    L  T EPC MC      ARI  +       +   +    +
Sbjct: 61  IVAIRDALSSSGETDLRGTTLLATGEPCGMCYRHAINARITDIRVAVDRDQVAELGFDYR 120


>gi|284033021|ref|YP_003382952.1| riboflavin biosynthesis protein RibD [Kribbella flavida DSM 17836]
 gi|283812314|gb|ADB34153.1| riboflavin biosynthesis protein RibD [Kribbella flavida DSM 17836]
          Length = 344

 Score = 82.7 bits (204), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 31/146 (21%), Positives = 45/146 (30%), Gaps = 25/146 (17%)

Query: 4   GNVFMSCALEEAQNAALRNEIP---VGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAI 59
              +M  A+E A         P   VG V    +        +          HAE+ A+
Sbjct: 8   DVAWMRRAIELAARGLGST-HPNPVVGCVITGRDGHPAGEGFHAVAGG----PHAEVAAL 62

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENG 113
           RM       +       YVTLEPC        CA A+  A + R+ Y   +P       G
Sbjct: 63  RMAG-----DRARGGTAYVTLEPCNHTGRTGPCADALIEAGVARVLYAVPDPNRQAAG-G 116

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQ 139
                    H    +  G+    +  
Sbjct: 117 ADKLRSKNVH----VEQGLLRAEAEA 138


>gi|261855451|ref|YP_003262734.1| CMP/dCMP deaminase zinc-binding protein [Halothiobacillus
           neapolitanus c2]
 gi|261835920|gb|ACX95687.1| CMP/dCMP deaminase zinc-binding protein [Halothiobacillus
           neapolitanus c2]
          Length = 178

 Score = 82.7 bits (204), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 34/153 (22%), Positives = 57/153 (37%), Gaps = 18/153 (11%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNK--IISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           +  + E A  A      P GA+ V  +   ++    N      D   HAE    R+    
Sbjct: 22  LRRSNEIALRALDLGRHPFGALLVGPDHEMVLLEQCN-----IDTVNHAESTLARVAATN 76

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG---------IENGTQF 116
            S E L +  LY  +EPC MCA     A I R+ +  +  +              + +  
Sbjct: 77  YSPEFLWQCTLYTAVEPCCMCAGTAYWANIGRVVFAMTEEQLLAETGNHHENPTMSVSSH 136

Query: 117 YTLATCHHSPEIYPGISE--QRSRQIIQDFFKE 147
           Y  A       +   + E  + +RQ+ +DF++ 
Sbjct: 137 YVYAHGQKPVVLIGPVEELIEETRQVHRDFWRN 169


>gi|23501654|ref|NP_697781.1| riboflavin biosynthesis protein RibD [Brucella suis 1330]
 gi|62289719|ref|YP_221512.1| riboflavin biosynthesis protein RibD [Brucella abortus bv. 1 str.
           9-941]
 gi|82699648|ref|YP_414222.1| cytidine/deoxycytidylate deaminase zinc-binding subunit [Brucella
           melitensis biovar Abortus 2308]
 gi|148559719|ref|YP_001258746.1| riboflavin biosynthesis protein RibD [Brucella ovis ATCC 25840]
 gi|161618734|ref|YP_001592621.1| riboflavin biosynthesis protein RibD [Brucella canis ATCC 23365]
 gi|163843038|ref|YP_001627442.1| riboflavin biosynthesis protein RibD [Brucella suis ATCC 23445]
 gi|189023968|ref|YP_001934736.1| riboflavin biosynthesis protein RibD [Brucella abortus S19]
 gi|225627265|ref|ZP_03785302.1| riboflavin biosynthesis protein RibD [Brucella ceti str. Cudo]
 gi|225852283|ref|YP_002732516.1| riboflavin biosynthesis protein RibD [Brucella melitensis ATCC
           23457]
 gi|237815207|ref|ZP_04594205.1| riboflavin biosynthesis protein RibD [Brucella abortus str. 2308 A]
 gi|254689028|ref|ZP_05152282.1| riboflavin biosynthesis protein RibD [Brucella abortus bv. 6 str.
           870]
 gi|254693511|ref|ZP_05155339.1| riboflavin biosynthesis protein RibD [Brucella abortus bv. 3 str.
           Tulya]
 gi|254697163|ref|ZP_05158991.1| riboflavin biosynthesis protein RibD [Brucella abortus bv. 2 str.
           86/8/59]
 gi|254704089|ref|ZP_05165917.1| riboflavin biosynthesis protein RibD [Brucella suis bv. 3 str. 686]
 gi|254707010|ref|ZP_05168838.1| riboflavin biosynthesis protein RibD [Brucella pinnipedialis
           M163/99/10]
 gi|254709881|ref|ZP_05171692.1| riboflavin biosynthesis protein RibD [Brucella pinnipedialis B2/94]
 gi|254713882|ref|ZP_05175693.1| riboflavin biosynthesis protein RibD [Brucella ceti M644/93/1]
 gi|254717061|ref|ZP_05178872.1| riboflavin biosynthesis protein RibD [Brucella ceti M13/05/1]
 gi|254730059|ref|ZP_05188637.1| riboflavin biosynthesis protein RibD [Brucella abortus bv. 4 str.
           292]
 gi|256031374|ref|ZP_05444988.1| riboflavin biosynthesis protein RibD [Brucella pinnipedialis
           M292/94/1]
 gi|256257278|ref|ZP_05462814.1| riboflavin biosynthesis protein RibD [Brucella abortus bv. 9 str.
           C68]
 gi|256264212|ref|ZP_05466744.1| riboflavin biosynthesis protein RibD [Brucella melitensis bv. 2
           str. 63/9]
 gi|260168507|ref|ZP_05755318.1| riboflavin biosynthesis protein RibD [Brucella sp. F5/99]
 gi|260545528|ref|ZP_05821269.1| riboflavin biosynthesis protein RibD [Brucella abortus NCTC 8038]
 gi|260566663|ref|ZP_05837133.1| riboflavin biosynthesis protein RibD [Brucella suis bv. 4 str. 40]
 gi|260754523|ref|ZP_05866871.1| riboflavin biosynthesis protein RibD [Brucella abortus bv. 6 str.
           870]
 gi|260757744|ref|ZP_05870092.1| riboflavin biosynthesis protein RibD [Brucella abortus bv. 4 str.
           292]
 gi|260761569|ref|ZP_05873912.1| riboflavin biosynthesis protein RibD [Brucella abortus bv. 2 str.
           86/8/59]
 gi|260883551|ref|ZP_05895165.1| riboflavin biosynthesis protein RibD [Brucella abortus bv. 9 str.
           C68]
 gi|261213771|ref|ZP_05928052.1| riboflavin biosynthesis protein RibD [Brucella abortus bv. 3 str.
           Tulya]
 gi|261218871|ref|ZP_05933152.1| riboflavin biosynthesis protein RibD [Brucella ceti M13/05/1]
 gi|261314477|ref|ZP_05953674.1| riboflavin biosynthesis protein RibD [Brucella pinnipedialis
           M163/99/10]
 gi|261317423|ref|ZP_05956620.1| riboflavin biosynthesis protein RibD [Brucella pinnipedialis B2/94]
 gi|261321630|ref|ZP_05960827.1| riboflavin biosynthesis protein RibD [Brucella ceti M644/93/1]
 gi|261754749|ref|ZP_05998458.1| riboflavin biosynthesis protein RibD [Brucella suis bv. 3 str. 686]
 gi|261757977|ref|ZP_06001686.1| riboflavin biosynthesis protein RibD [Brucella sp. F5/99]
 gi|265988460|ref|ZP_06101017.1| riboflavin biosynthesis protein RibD [Brucella pinnipedialis
           M292/94/1]
 gi|297248124|ref|ZP_06931842.1| riboflavin biosynthesis protein RibD [Brucella abortus bv. 5 str.
           B3196]
 gi|23347574|gb|AAN29696.1| riboflavin biosynthesis protein RibD [Brucella suis 1330]
 gi|62195851|gb|AAX74151.1| RibD, riboflavin biosynthesis protein RibD [Brucella abortus bv. 1
           str. 9-941]
 gi|82615749|emb|CAJ10745.1| Cytidine/deoxycytidylate deaminase, zinc-binding region:Bacterial
           bifunctional deaminase-reductase, C-terminal:Riboflavin
           bio [Brucella melitensis biovar Abortus 2308]
 gi|148370976|gb|ABQ60955.1| riboflavin biosynthesis protein RibD [Brucella ovis ATCC 25840]
 gi|161335545|gb|ABX61850.1| riboflavin biosynthesis protein RibD [Brucella canis ATCC 23365]
 gi|163673761|gb|ABY37872.1| riboflavin biosynthesis protein RibD [Brucella suis ATCC 23445]
 gi|189019540|gb|ACD72262.1| riboflavin biosynthesis protein RibD [Brucella abortus S19]
 gi|225617270|gb|EEH14315.1| riboflavin biosynthesis protein RibD [Brucella ceti str. Cudo]
 gi|225640648|gb|ACO00562.1| riboflavin biosynthesis protein RibD [Brucella melitensis ATCC
           23457]
 gi|237790044|gb|EEP64254.1| riboflavin biosynthesis protein RibD [Brucella abortus str. 2308 A]
 gi|260096935|gb|EEW80810.1| riboflavin biosynthesis protein RibD [Brucella abortus NCTC 8038]
 gi|260156181|gb|EEW91261.1| riboflavin biosynthesis protein RibD [Brucella suis bv. 4 str. 40]
 gi|260668062|gb|EEX55002.1| riboflavin biosynthesis protein RibD [Brucella abortus bv. 4 str.
           292]
 gi|260672001|gb|EEX58822.1| riboflavin biosynthesis protein RibD [Brucella abortus bv. 2 str.
           86/8/59]
 gi|260674631|gb|EEX61452.1| riboflavin biosynthesis protein RibD [Brucella abortus bv. 6 str.
           870]
 gi|260873079|gb|EEX80148.1| riboflavin biosynthesis protein RibD [Brucella abortus bv. 9 str.
           C68]
 gi|260915378|gb|EEX82239.1| riboflavin biosynthesis protein RibD [Brucella abortus bv. 3 str.
           Tulya]
 gi|260923960|gb|EEX90528.1| riboflavin biosynthesis protein RibD [Brucella ceti M13/05/1]
 gi|261294320|gb|EEX97816.1| riboflavin biosynthesis protein RibD [Brucella ceti M644/93/1]
 gi|261296646|gb|EEY00143.1| riboflavin biosynthesis protein RibD [Brucella pinnipedialis B2/94]
 gi|261303503|gb|EEY07000.1| riboflavin biosynthesis protein RibD [Brucella pinnipedialis
           M163/99/10]
 gi|261737961|gb|EEY25957.1| riboflavin biosynthesis protein RibD [Brucella sp. F5/99]
 gi|261744502|gb|EEY32428.1| riboflavin biosynthesis protein RibD [Brucella suis bv. 3 str. 686]
 gi|263094456|gb|EEZ18278.1| riboflavin biosynthesis protein RibD [Brucella melitensis bv. 2
           str. 63/9]
 gi|264660657|gb|EEZ30918.1| riboflavin biosynthesis protein RibD [Brucella pinnipedialis
           M292/94/1]
 gi|297175293|gb|EFH34640.1| riboflavin biosynthesis protein RibD [Brucella abortus bv. 5 str.
           B3196]
 gi|326408787|gb|ADZ65852.1| riboflavin biosynthesis protein RibD [Brucella melitensis M28]
          Length = 373

 Score = 82.7 bits (204), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 31/145 (21%), Positives = 47/145 (32%), Gaps = 21/145 (14%)

Query: 3   KGNVFMSCALEEAQ--NAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
               FM   +  A+           VG + V +  I+ R             HAE  A+ 
Sbjct: 14  NDLRFMEATIRYARRHKGLTGTNPSVGTIIVKDGVIVGRG----VTALGGRPHAEPQALA 69

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
                           YVTLEPC        CA A+  + + R+   A++P       G 
Sbjct: 70  EVGEAA-----RGATAYVTLEPCAHHGRTPPCAEALVRSGVARVVVAATDPDERVSGKGF 124

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQ 139
                A      E+ PGI  +++  
Sbjct: 125 AILREAG----IEVVPGILSEQAAD 145


>gi|71083736|ref|YP_266456.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Candidatus
           Pelagibacter ubique HTCC1062]
 gi|71062849|gb|AAZ21852.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Candidatus
           Pelagibacter ubique HTCC1062]
          Length = 351

 Score = 82.7 bits (204), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 35/123 (28%), Positives = 45/123 (36%), Gaps = 17/123 (13%)

Query: 8   MSCALEEAQ-NAALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M  AL  A+    L    P VG V V NNKI+S      +     T HAE  AI+     
Sbjct: 1   MELALNLAKARHGLTGINPSVGCVIVKNNKILSIG----QTGFKGTPHAEFNAIKN---- 52

Query: 66  LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
            S E +    +YVTLEPC        C   I   +I+ + YG  +               
Sbjct: 53  -SHENIEGSKMYVTLEPCSHYGKTPPCTNIIIKNKIKEVVYGVEDIDKKVKGKTLNILKS 111

Query: 120 ATC 122
              
Sbjct: 112 KNI 114


>gi|21230291|ref|NP_636208.1| hypothetical protein XCC0817 [Xanthomonas campestris pv. campestris
           str. ATCC 33913]
 gi|66769715|ref|YP_244477.1| hypothetical protein XC_3413 [Xanthomonas campestris pv. campestris
           str. 8004]
 gi|188992931|ref|YP_001904941.1| hypothetical protein xccb100_3536 [Xanthomonas campestris pv.
           campestris str. B100]
 gi|21111839|gb|AAM40132.1| conserved hypothetical protein [Xanthomonas campestris pv.
           campestris str. ATCC 33913]
 gi|66575047|gb|AAY50457.1| conserved hypothetical protein [Xanthomonas campestris pv.
           campestris str. 8004]
 gi|167734691|emb|CAP52901.1| Conserved hypothetical protein [Xanthomonas campestris pv.
           campestris]
          Length = 186

 Score = 82.7 bits (204), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 33/149 (22%), Positives = 59/149 (39%), Gaps = 17/149 (11%)

Query: 10  CALEEAQNAAL-RNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
            A++ ++     R+  P GAV    +++II+ A NR        AHAE +A  +  + L 
Sbjct: 33  LAIDLSRMNVEARSGGPFGAVVFGPDDRIIAAAVNRVVPQNTSLAHAENMAYMLAQQRLQ 92

Query: 68  QEILPEV----DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC- 122
              L +V     L  + +PC  C  A   A I RL  GA       +   T+F       
Sbjct: 93  TPRLNDVLSPVTLATSAQPCCQCYGATVWAGIDRLLIGARAEDVMAL---TEFDEGPLPA 149

Query: 123 -------HHSPEIYPGISEQRSRQIIQDF 144
                      E+   +  +++  +++ +
Sbjct: 150 DWVGELTRRGIEVVRDVQREQACAVLRSY 178


>gi|256060883|ref|ZP_05451043.1| riboflavin biosynthesis protein RibD [Brucella neotomae 5K33]
 gi|261324881|ref|ZP_05964078.1| riboflavin biosynthesis protein RibD [Brucella neotomae 5K33]
 gi|261300861|gb|EEY04358.1| riboflavin biosynthesis protein RibD [Brucella neotomae 5K33]
          Length = 373

 Score = 82.7 bits (204), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 31/145 (21%), Positives = 47/145 (32%), Gaps = 21/145 (14%)

Query: 3   KGNVFMSCALEEAQ--NAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
               FM   +  A+           VG + V +  I+ R             HAE  A+ 
Sbjct: 14  NDLRFMEATIRYARRHKGLTGTNPSVGTIIVKDGVIVGRG----VTALGGRPHAEPQALA 69

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
                           YVTLEPC        CA A+  + + R+   A++P       G 
Sbjct: 70  EVGEAA-----RGATAYVTLEPCAHHGRTPPCAEALVRSGVARVVVAATDPDERVSGKGF 124

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQ 139
                A      E+ PGI  +++  
Sbjct: 125 AILREAG----IEVVPGILSEQAAD 145


>gi|254486598|ref|ZP_05099803.1| riboflavin biosynthesis protein RibD [Roseobacter sp. GAI101]
 gi|214043467|gb|EEB84105.1| riboflavin biosynthesis protein RibD [Roseobacter sp. GAI101]
          Length = 356

 Score = 82.7 bits (204), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 31/142 (21%), Positives = 52/142 (36%), Gaps = 25/142 (17%)

Query: 8   MSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
           M+ AL   +    +  +   P VG V V  ++I+ R   +         HAE  A+    
Sbjct: 1   MALALSLGRRG--QGTVWPNPAVGCVIVQGDRIVGRGWTQPGGR----PHAEPEAL---- 50

Query: 64  RILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFY 117
              +        +YVTLEPC        CA A+  A++ R+    ++        G    
Sbjct: 51  -AQAGAQAVGATVYVTLEPCAHTGKTPPCAQALIDAQVARVVIACADSDPRVSGKGIAML 109

Query: 118 TLATCHHSPEIYPGISEQRSRQ 139
             A       +  G+ E  +R+
Sbjct: 110 QAAG----IAVDTGVLEDEARK 127


>gi|268685855|ref|ZP_06152717.1| riboflavin biosynthesis protein RibD [Neisseria gonorrhoeae
           SK-93-1035]
 gi|268626139|gb|EEZ58539.1| riboflavin biosynthesis protein RibD [Neisseria gonorrhoeae
           SK-93-1035]
          Length = 369

 Score = 82.3 bits (203), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 34/153 (22%), Positives = 55/153 (35%), Gaps = 24/153 (15%)

Query: 8   MSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M  AL  A       +  P VG V     +I+ +  +          HAE+ A+R    +
Sbjct: 10  MENALRLAALGRFSTSPNPRVGCVIAHGRQIVGQGFHVKAGE----PHAEVHALRQAGEM 65

Query: 66  LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
                      +VTLEPC        CA A+  + + R+     +P       G      
Sbjct: 66  A-----KGATAFVTLEPCSHYGRTPPCAEALLRSGVTRVVAAMRDPNPPVAGKGLVLLKA 120

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDF---FKERR 149
           A      E   G+ E ++R++ + F    + RR
Sbjct: 121 AGI--KTEC--GLLENKARELNRGFLSRIERRR 149


>gi|315122228|ref|YP_004062717.1| 5-amino-6-(5-phosphoribosylamino)uracil
           reductase/diaminohydroxyphosphoribosylaminopyrimidine
           [Candidatus Liberibacter solanacearum CLso-ZC1]
 gi|313495630|gb|ADR52229.1| 5-amino-6-(5-phosphoribosylamino)uracil
           reductase/diaminohydroxyphosphoribosylaminopyrimidine
           [Candidatus Liberibacter solanacearum CLso-ZC1]
          Length = 367

 Score = 82.3 bits (203), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 33/146 (22%), Positives = 48/146 (32%), Gaps = 22/146 (15%)

Query: 4   GNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
              FMS AL  +     L    P V  + V +  I+ R             HAE  A+  
Sbjct: 7   DERFMSVALRFSCWGTGLTGTNPSVACLIVKDGIIVGRG----VTAYGGRPHAETQALEE 62

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
                  E       YVTLEPC        CA  I  A I R+     +P       G Q
Sbjct: 63  AG-----ERARGATAYVTLEPCSHYGQAPPCAKFIVEAGISRVVVCVIDPDVRVSGRGLQ 117

Query: 116 FYTLATCHHSPEIYPGISEQRSRQII 141
           + +         +   + E+   +++
Sbjct: 118 WLSQKGI-----VVDKVLEREGERVL 138


>gi|330863855|emb|CBX73948.1| riboflavin biosynthesis protein ribD [Yersinia enterocolitica
           W22703]
          Length = 337

 Score = 82.3 bits (203), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 27/124 (21%), Positives = 42/124 (33%), Gaps = 19/124 (15%)

Query: 32  LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC------TM 85
            + +I+    +          HAE+ A+RM               YVTLEPC        
Sbjct: 2   RDGEIVGEGYHLRAGE----PHAEVHALRMAGEKA-----RGATAYVTLEPCSHHGRTPP 52

Query: 86  CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
           CA A+  A ++R+     +P       G      A      E+  G+    +  +   F 
Sbjct: 53  CADALLTAGVKRVVAAMQDPNPQVAGRGLYKLKQAG----VEVDHGLMLAEAEAVNLGFL 108

Query: 146 KERR 149
           K  R
Sbjct: 109 KRMR 112


>gi|240124968|ref|ZP_04737854.1| putative diaminohydroxyphosphoribosylaminopyrimidine deaminase
           [Neisseria gonorrhoeae SK-92-679]
 gi|268683551|ref|ZP_06150413.1| riboflavin biosynthesis protein RibD [Neisseria gonorrhoeae
           SK-92-679]
 gi|268623835|gb|EEZ56235.1| riboflavin biosynthesis protein RibD [Neisseria gonorrhoeae
           SK-92-679]
          Length = 369

 Score = 82.3 bits (203), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 34/153 (22%), Positives = 55/153 (35%), Gaps = 24/153 (15%)

Query: 8   MSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M  AL  A       +  P VG V     +I+ +  +          HAE+ A+R    +
Sbjct: 10  MENALRLAALGRFSTSPNPRVGCVIAHGRQIVGQGFHVKAGE----PHAEVHALRQAGEM 65

Query: 66  LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
                      +VTLEPC        CA A+  + + R+     +P       G      
Sbjct: 66  A-----KGATAFVTLEPCSHYGRTPPCAEALLRSGVTRVVAAMRDPNPPVAGKGLVLLKA 120

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDF---FKERR 149
           A      E   G+ E ++R++ + F    + RR
Sbjct: 121 AGI--KTEC--GLLENKARELNRGFLSRIERRR 149


>gi|317508958|ref|ZP_07966591.1| riboflavin biosynthesis protein RibD [Segniliparus rugosus ATCC
           BAA-974]
 gi|316252723|gb|EFV12160.1| riboflavin biosynthesis protein RibD [Segniliparus rugosus ATCC
           BAA-974]
          Length = 363

 Score = 82.3 bits (203), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 30/121 (24%), Positives = 41/121 (33%), Gaps = 21/121 (17%)

Query: 23  EIPVGAVAVLNN-KIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81
           E PVGAV V    +I+ R   +        AHAE++AI         E       YVTLE
Sbjct: 44  EPPVGAVLVSPGGQIVGRGVTQPPGQ----AHAEVMAIAEAG-----ERARGATAYVTLE 94

Query: 82  PCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQ 135
           PC        C+ A+  A I  + Y   +P                      +  G+   
Sbjct: 95  PCDHVGRTGPCSRALIAAGIAEVVYAVPDPNPRSSGGARTLEAA-----GVRVRSGVLAD 149

Query: 136 R 136
            
Sbjct: 150 E 150


>gi|194097710|ref|YP_002000751.1| Riboflavin biosynthesis protein RibD [Neisseria gonorrhoeae
           NCCP11945]
 gi|240013403|ref|ZP_04720316.1| Riboflavin biosynthesis protein RibD [Neisseria gonorrhoeae DGI18]
 gi|240112192|ref|ZP_04726682.1| Riboflavin biosynthesis protein RibD [Neisseria gonorrhoeae MS11]
 gi|193933000|gb|ACF28824.1| Riboflavin biosynthesis protein RibD [Neisseria gonorrhoeae
           NCCP11945]
          Length = 361

 Score = 82.3 bits (203), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 34/153 (22%), Positives = 55/153 (35%), Gaps = 24/153 (15%)

Query: 8   MSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M  AL  A       +  P VG V     +I+ +  +          HAE+ A+R    +
Sbjct: 2   MENALRLAALGRFSTSPNPRVGCVIAHGRQIVGQGFHVKAGE----PHAEVHALRQAGEM 57

Query: 66  LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
                      +VTLEPC        CA A+  + + R+     +P       G      
Sbjct: 58  A-----KGATAFVTLEPCSHYGRTPPCAEALLRSGVTRVVAAMRDPNPPVAGKGLVLLKA 112

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDF---FKERR 149
           A      E   G+ E ++R++ + F    + RR
Sbjct: 113 AGI--KTEC--GLLENKARELNRGFLSRIERRR 141


>gi|325197682|gb|ADY93138.1| riboflavin biosynthesis protein RibD [Neisseria meningitidis G2136]
          Length = 369

 Score = 82.3 bits (203), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 33/159 (20%), Positives = 55/159 (34%), Gaps = 24/159 (15%)

Query: 2   KKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
                 M  AL  A       +  P VG V    ++I+ +  +          HAE+ A+
Sbjct: 4   DTDISMMENALRLAALGRFSTSPNPRVGCVIAHGSQIVGQGFHVKAGE----PHAEVHAL 59

Query: 60  RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113
                +           +VTLEPC        CA A+  + + R+     +P       G
Sbjct: 60  HQAGEMA-----KGATAFVTLEPCSHYGRTPPCAEALLRSGVTRVVAAMRDPNPLVAGKG 114

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDF---FKERR 149
                 A      E   G+ E ++R++ + F    + RR
Sbjct: 115 LALLESAGI--KTEC--GLLENKARELNRGFLSSIERRR 149


>gi|15964963|ref|NP_385316.1| riboflavin biosynthesis protein [Sinorhizobium meliloti 1021]
 gi|307301034|ref|ZP_07580803.1| riboflavin biosynthesis protein RibD [Sinorhizobium meliloti
           BL225C]
 gi|307317768|ref|ZP_07597206.1| riboflavin biosynthesis protein RibD [Sinorhizobium meliloti AK83]
 gi|15074142|emb|CAC45789.1| Probable riboflavin biosynthesis protein (deaminase/reductase)
           [Sinorhizobium meliloti 1021]
 gi|20385601|gb|AAM21351.1| riboflavin-specific deaminase/reductase [Sinorhizobium meliloti]
 gi|306896530|gb|EFN27278.1| riboflavin biosynthesis protein RibD [Sinorhizobium meliloti AK83]
 gi|306903989|gb|EFN34575.1| riboflavin biosynthesis protein RibD [Sinorhizobium meliloti
           BL225C]
          Length = 401

 Score = 82.3 bits (203), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 30/159 (18%), Positives = 53/159 (33%), Gaps = 24/159 (15%)

Query: 2   KKGNVFMSCALEEAQN--AALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
           ++   FM+ AL  A+           VG + V    I+ RA            HAE  A+
Sbjct: 6   REDERFMAAALRLARRNLGLTSTNPSVGCIIVNKGTIVGRA----VTAPGGRPHAETQAL 61

Query: 60  RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113
                            YV LEPC        CA A+  + + R+     +P       G
Sbjct: 62  AEAGEKA-----RGATAYVALEPCSHHGKTPPCADALIASGVGRVVVSILDPDERVAGRG 116

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFF---KERR 149
                 A      ++  G   +   ++++ +    +++R
Sbjct: 117 VVMLRGAG----IDVDIGTLHEEGGRVLEAYLMRQRKKR 151


>gi|229495189|ref|ZP_04388924.1| riboflavin biosynthesis protein RibD [Porphyromonas endodontalis
           ATCC 35406]
 gi|229317632|gb|EEN83530.1| riboflavin biosynthesis protein RibD [Porphyromonas endodontalis
           ATCC 35406]
          Length = 342

 Score = 82.3 bits (203), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 27/126 (21%), Positives = 45/126 (35%), Gaps = 17/126 (13%)

Query: 3   KGNVFMSCALEEAQNAALRN---EIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
              ++M   L+ A  A         P VGA+ V  ++I+    +          HAE+  
Sbjct: 4   NDTLYMQRCLDLA--ALATGYTSPNPLVGAILVHQDRIVGEGYHHRAGE----PHAEVNC 57

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
                R   ++ + +  LYV+LEPC        CA  +   R+ R+     +P       
Sbjct: 58  F-ASVRPEDEKWIAQSTLYVSLEPCSHYGKTPPCAELVLQKRVPRVVVAMQDPFPEVAGR 116

Query: 113 GTQFYT 118
           G     
Sbjct: 117 GIALLR 122


>gi|254386271|ref|ZP_05001580.1| riboflavin biosynthesis protein RibD [Streptomyces sp. Mg1]
 gi|194345125|gb|EDX26091.1| riboflavin biosynthesis protein RibD [Streptomyces sp. Mg1]
          Length = 360

 Score = 82.3 bits (203), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 32/142 (22%), Positives = 47/142 (33%), Gaps = 25/142 (17%)

Query: 8   MSCALEEAQNAA---LRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGC 63
           M  A+E A         N + VG V       ++    ++         HAE+ A+R   
Sbjct: 1   MRRAIELAARGLGSTSPNPV-VGCVITDARGAVVGEGWHQRAGG----PHAEVHALRAAG 55

Query: 64  RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFY 117
                        YVTLEPC        CA A+  A + R+ Y  S+P       G    
Sbjct: 56  TAA-----RGGTAYVTLEPCNHTGRTGPCAQALIEAGVTRVVYAVSDPNPQASGGGATLR 110

Query: 118 TLATCHHSPEIYPGISEQRSRQ 139
                        G+ EQ + +
Sbjct: 111 AA-----GIATEAGLLEQEAEE 127


>gi|254525413|ref|ZP_05137465.1| riboflavin biosynthesis protein RibD [Prochlorococcus marinus str.
           MIT 9202]
 gi|221536837|gb|EEE39290.1| riboflavin biosynthesis protein RibD [Prochlorococcus marinus str.
           MIT 9202]
          Length = 364

 Score = 82.3 bits (203), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 30/151 (19%), Positives = 57/151 (37%), Gaps = 22/151 (14%)

Query: 3   KGNVFMSCALEEAQNAALRNEI-P-VGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAI 59
               +M  A+  A          P VGAV +  N K++S   +     K    HAE +A 
Sbjct: 7   SHTKWMKRAIFLASLGKNTTSPNPKVGAVILDKNGKLVSEGFH----FKSGLPHAEAMAF 62

Query: 60  RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113
               +      +    +YV LEPC        C   +  + ++++Y    +P       G
Sbjct: 63  NNLKQ-----DVKGGTMYVNLEPCCHQGKTPPCVDKVISSGLKKVYISIEDPDKRVSGKG 117

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
            +    A      +++ G+ ++ S ++ + F
Sbjct: 118 IKLLKKAG----VQVHLGLCKKESLELNKAF 144


>gi|21241660|ref|NP_641242.1| hypothetical protein XAC0890 [Xanthomonas axonopodis pv. citri str.
           306]
 gi|21107023|gb|AAM35778.1| conserved hypothetical protein [Xanthomonas axonopodis pv. citri
           str. 306]
          Length = 186

 Score = 82.3 bits (203), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 35/149 (23%), Positives = 59/149 (39%), Gaps = 17/149 (11%)

Query: 10  CALEEAQ-NAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
            A+E ++ N    +  P GAV    +++II+ A NR        AHAE +A  +  + L 
Sbjct: 33  LAIELSRMNVRESSGGPFGAVVFGPDHRIIAAAVNRVVPQTTSLAHAENMAYMLAQQRLQ 92

Query: 68  QEILPEV----DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA--- 120
              L +V     L  + +PC  C  A   A I RL  GA       +   TQF       
Sbjct: 93  TPRLNDVLSPVTLATSAQPCCQCYGATVWAGIDRLLIGARADDVMAL---TQFDEGPLPA 149

Query: 121 -----TCHHSPEIYPGISEQRSRQIIQDF 144
                      E+   +   ++  +++++
Sbjct: 150 DWVGELSRRGIEVVRDVLRDQACAVLRNY 178


>gi|163841087|ref|YP_001625492.1| riboflavin biosynthesis protein [Renibacterium salmoninarum ATCC
           33209]
 gi|162954563|gb|ABY24078.1| riboflavin biosynthesis protein [Renibacterium salmoninarum ATCC
           33209]
          Length = 369

 Score = 82.3 bits (203), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 32/156 (20%), Positives = 49/156 (31%), Gaps = 21/156 (13%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAI 59
           M      M  AL  A          VGAV +  + ++++   +        T HAE LA+
Sbjct: 1   MNHDEA-MDLALATAIKGIRGANPLVGAVILGADGELLAAGHHA----GAGTPHAEALAL 55

Query: 60  RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113
                 L         L  TLEPC        C+ AI  A I  + Y A +P        
Sbjct: 56  AQ----LEPSQSAGATLVCTLEPCSHVGRTPACSQAIIDAGITTVVYAADDPD-----QN 106

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
                         +   +      ++ + +F   R
Sbjct: 107 AAGGAARLRAAGITVISDVRAAEGHELNRRWFAAVR 142


>gi|54401353|gb|AAV34447.1| predicted diaminohydroxyphosphoribosylaminopyrimidine deaminase
           [uncultured proteobacterium RedeBAC7D11]
          Length = 366

 Score = 82.3 bits (203), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 37/155 (23%), Positives = 61/155 (39%), Gaps = 26/155 (16%)

Query: 3   KGNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
             + F+S A+          +  + VG V V +NKII R   +        +HAEI AI 
Sbjct: 2   NDSFFISKAISLGLKGRFTAKPGVKVGCVIVKDNKIIGRGFYQKYGG----SHAEINAIN 57

Query: 61  MGCRILSQEI---LPEVDLYVTLEPCT------MCAAAISLARIRRLYYGASNPKGGGIE 111
              +         L   DL+VTLEPC+       C   +     +R+  GA +P   GI 
Sbjct: 58  DVKKKYKTNYLSKLSGSDLFVTLEPCSKKGKTGACVNELKKYDFKRIIVGAKDPTQSGIN 117

Query: 112 NGTQF-YTLATCHHSPEIYPGISEQRSRQIIQDFF 145
           +  +  Y +   ++           + + + + FF
Sbjct: 118 SLQRAGYEVKNLNNQ----------QCQILNESFF 142


>gi|254292424|ref|YP_003058447.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase [Hirschia
           baltica ATCC 49814]
 gi|254040955|gb|ACT57750.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase [Hirschia
           baltica ATCC 49814]
          Length = 215

 Score = 82.3 bits (203), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 30/155 (19%), Positives = 56/155 (36%), Gaps = 24/155 (15%)

Query: 1   MKKGNVFMSCALEEAQN--AALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTA-HAEIL 57
           ++   ++M  A+  A+           V  V V    II  A        D    HAE +
Sbjct: 7   IEMDKIYMRRAIALARAQLGRTAPNPAVACVLVSGETIIGEA-----ATGDGGRPHAEEI 61

Query: 58  AIRMGCRILSQEILPEVDLYVTLEPC-------TMCAAAISLARIRRLYYGASNPKGGGI 110
           A+      L  + L     YVTLEPC         C+  + ++ ++R+     +P     
Sbjct: 62  ALES----LRGQELSRATAYVTLEPCHSRSNGGAGCSDRLVVSGVKRVVIAQIDPHPTAK 117

Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
           +   +           ++  G+ E  + ++ + FF
Sbjct: 118 DGIAKLKAA-----GLDVEVGLLEDEAAELTRGFF 147


>gi|159471802|ref|XP_001694045.1| predicted protein [Chlamydomonas reinhardtii]
 gi|158277212|gb|EDP02981.1| predicted protein [Chlamydomonas reinhardtii]
          Length = 121

 Score = 82.3 bits (203), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 29/112 (25%), Positives = 46/112 (41%), Gaps = 17/112 (15%)

Query: 3   KGNVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +   ++  ALE A+ A  +      VG V V + K++    +     K    HAE+ A+R
Sbjct: 1   QDRAYILKALELAKRAQGKTHPNPAVGCVIVKDGKVVGEGYH----PKAGMPHAEVYALR 56

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPK 106
                           YVTLEPC        C+ A+  A++ R+  G  +P 
Sbjct: 57  GAGN-----NAEGATAYVTLEPCNHYGRTPPCSRALVEAKVARVVVGVGDPN 103


>gi|164658437|ref|XP_001730344.1| hypothetical protein MGL_2726 [Malassezia globosa CBS 7966]
 gi|159104239|gb|EDP43130.1| hypothetical protein MGL_2726 [Malassezia globosa CBS 7966]
          Length = 489

 Score = 82.3 bits (203), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 32/164 (19%), Positives = 57/164 (34%), Gaps = 37/164 (22%)

Query: 9   SCALEEAQNAALRNEIPVGAVAV----LNNKIISR--AGNRNRELKDVTAHAEILAIRMG 62
              +  AQ A    E+ +G V V     +  I     A +          HA + A+R  
Sbjct: 313 RRCIATAQQARAAGELGIG-VFVTNMEQDGSIAISVDAHDTRIRDAHPLRHAVLNAVRRV 371

Query: 63  CRILSQEI--------------LPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGG 108
             I SQ                L  + +++T EPC  CA A+  +R+R +++   +P+ G
Sbjct: 372 AHIRSQSRSSTNEEAENGQDYLLTGLTMFITHEPCVYCAMALIHSRVRSVFFLFPSPRSG 431

Query: 109 GI----------------ENGTQFYTLATCHHSPEIYPGISEQR 136
           G                       +  +  +H  E++  I+   
Sbjct: 432 GFCGAQSNASDICDGGQDGGPFCIHEQSGLNHKYEVWRWINPAE 475


>gi|239993617|ref|ZP_04714141.1| cytidine/deoxycytidylate deaminase family protein [Alteromonas
          macleodii ATCC 27126]
          Length = 93

 Score = 82.3 bits (203), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 19/53 (35%), Positives = 27/53 (50%)

Query: 2  KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHA 54
          ++  ++M  AL  A  A    E+PVGA  VLN ++I    N      D +AHA
Sbjct: 41 EEDIMWMRHALTLADKAESIGEVPVGACVVLNGELIGEGFNTPITDNDPSAHA 93


>gi|297560496|ref|YP_003679470.1| CMP/dCMP deaminase zinc-binding protein [Nocardiopsis dassonvillei
           subsp. dassonvillei DSM 43111]
 gi|296844944|gb|ADH66964.1| CMP/dCMP deaminase zinc-binding protein [Nocardiopsis dassonvillei
           subsp. dassonvillei DSM 43111]
          Length = 159

 Score = 82.3 bits (203), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 27/107 (25%), Positives = 45/107 (42%), Gaps = 10/107 (9%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIR 60
           +     +  A++ A+ +    + P G+V V     ++    NR     D T H E  AI 
Sbjct: 4   ETDMRHLRRAVDLAEESLEAGDEPFGSVLVSGEGAVLFEDRNRV-AGGDPTQHPEF-AI- 60

Query: 61  MGCRILSQEILPE----VDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
              R  +  + P       +Y + E C MC+AA   A + R+ Y +S
Sbjct: 61  --ARWTTTRVSPGERAAATVYTSGEHCPMCSAAHGWAGLGRIVYASS 105


>gi|292669813|ref|ZP_06603239.1| riboflavin biosynthesis protein RibD [Selenomonas noxia ATCC 43541]
 gi|292648610|gb|EFF66582.1| riboflavin biosynthesis protein RibD [Selenomonas noxia ATCC 43541]
          Length = 370

 Score = 81.9 bits (202), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 41/151 (27%), Positives = 60/151 (39%), Gaps = 21/151 (13%)

Query: 4   GNVFMSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
              +M  AL  A+ A  R    P VGA+ V +  +++   +R         HAEI A+RM
Sbjct: 8   DESYMREALRLAEFARGRTSPNPLVGALIVRDGVVVANGWHRAAGE----PHAEIHALRM 63

Query: 62  GCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQ 115
              +          LYVTLEPC        CA A+  A + R+     +P       G  
Sbjct: 64  AGDLA-----RGAALYVTLEPCAHHGRTGPCAEAVIAAGVARVVVALCDPNPLVAGRGIA 118

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
               A      E+  G+ E  +R+  + F K
Sbjct: 119 MLEAAG----IEVVTGVLEDEARRQNETFLK 145


>gi|317053384|ref|YP_004119151.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase [Pantoea sp.
           At-9b]
 gi|316953123|gb|ADU72595.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase [Pantoea sp.
           At-9b]
          Length = 144

 Score = 81.9 bits (202), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 38/150 (25%), Positives = 57/150 (38%), Gaps = 21/150 (14%)

Query: 1   MKKGNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           M K   FM  ALE ++ A    R   PVG V V N  ++S+   ++        HAEI A
Sbjct: 1   MSKELDFMLLALEYSRLALPECRPNPPVGCVIVHNGVVVSKGFTQSPGHH----HAEIDA 56

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
           I           + E D++VTLEPC        CA  ++  + R +Y    +P       
Sbjct: 57  I-----SRLTFPMGECDIFVTLEPCSYQGRTPSCARTLAEMKPRHIYIAIEDPHPRNSGE 111

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQ 142
           G +       +       GI +      + 
Sbjct: 112 GLRILK----NAGISFTLGIGKDEIADFLS 137


>gi|240127481|ref|ZP_04740142.1| Riboflavin biosynthesis protein RibD [Neisseria gonorrhoeae
           SK-93-1035]
          Length = 361

 Score = 81.9 bits (202), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 34/153 (22%), Positives = 55/153 (35%), Gaps = 24/153 (15%)

Query: 8   MSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M  AL  A       +  P VG V     +I+ +  +          HAE+ A+R    +
Sbjct: 2   MENALRLAALGRFSTSPNPRVGCVIAHGRQIVGQGFHVKAGE----PHAEVHALRQAGEM 57

Query: 66  LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
                      +VTLEPC        CA A+  + + R+     +P       G      
Sbjct: 58  A-----KGATAFVTLEPCSHYGRTPPCAEALLRSGVTRVVAAMRDPNPPVAGKGLVLLKA 112

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDF---FKERR 149
           A      E   G+ E ++R++ + F    + RR
Sbjct: 113 AGI--KTEC--GLLENKARELNRGFLSRIERRR 141


>gi|325143820|gb|EGC66136.1| riboflavin biosynthesis protein RibD [Neisseria meningitidis
           M01-240013]
          Length = 370

 Score = 81.9 bits (202), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 33/159 (20%), Positives = 56/159 (35%), Gaps = 24/159 (15%)

Query: 2   KKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
                 M  AL  A       +  P VG V    ++I+ +  +          HAE+ A+
Sbjct: 4   DTDISMMENALRLAALGRFSTSPNPRVGCVIAHGSQIVGQGFHVKAGE----PHAEVHAL 59

Query: 60  RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113
                +           +VTLEPC        CA A+  + + R+     +P       G
Sbjct: 60  HQAGEMAQ-----GATAFVTLEPCSHYGRTPPCAEALLRSGVTRVVAAMRDPNPLVAGKG 114

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDF---FKERR 149
                +A      E   G+ E ++R++ + F    + RR
Sbjct: 115 LALLEVAGI--KTEC--GLLEHQARELNRGFLSRIERRR 149


>gi|229822451|ref|YP_002883977.1| CMP/dCMP deaminase zinc-binding [Beutenbergia cavernae DSM 12333]
 gi|229568364|gb|ACQ82215.1| CMP/dCMP deaminase zinc-binding [Beutenbergia cavernae DSM 12333]
          Length = 176

 Score = 81.9 bits (202), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 34/122 (27%), Positives = 51/122 (41%), Gaps = 4/122 (3%)

Query: 18  AALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPE-VDL 76
              R E+P+GAV      +I RA  + + L     HA++LA+         +     + L
Sbjct: 27  GLARGEMPIGAVVFAGEDVIGRAFTQEQSLGRRIVHADLLAMIAADEHRGFDRSAGPLTL 86

Query: 77  YVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENG--TQFYTLATCHHSP-EIYPGIS 133
            V LEPC MC  A     + R++YG ++P  GG+E     +          P EI  G  
Sbjct: 87  AVNLEPCLMCLGAAITLGVERVFYGLASPNDGGVELLAQWRPPVEQQFFRRPREIRGGFQ 146

Query: 134 EQ 135
             
Sbjct: 147 GD 148


>gi|327538743|gb|EGF25393.1| riboflavin biosynthesis protein RibD [Rhodopirellula baltica WH47]
          Length = 394

 Score = 81.9 bits (202), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 35/154 (22%), Positives = 62/154 (40%), Gaps = 22/154 (14%)

Query: 4   GNVFMSCALEEAQNAALRNEI--PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
              +M+ A+E A     + E   PVG V V ++  I +  ++         HAE+ A+  
Sbjct: 16  DVRWMTEAIELAYQGRGKVEPNPPVGCVLVRDSVCIGKGYHQRFGG----PHAEVEAL-- 69

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
                S +       YV+LEPC        CA A+  A++ R+     +P       G +
Sbjct: 70  ----SSCDDATGATAYVSLEPCCHHGKTPPCADALIRAKVARVVVSVVDPFDQVDGGGIE 125

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
               A      E+  GI+++   +++  + K  R
Sbjct: 126 KLRAAG----IEVVTGIAKEAGEELLAAYLKRVR 155


>gi|94984408|ref|YP_603772.1| riboflavin biosynthesis protein RibD [Deinococcus geothermalis DSM
           11300]
 gi|94554689|gb|ABF44603.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Deinococcus
           geothermalis DSM 11300]
          Length = 383

 Score = 81.9 bits (202), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 36/142 (25%), Positives = 52/142 (36%), Gaps = 21/142 (14%)

Query: 4   GNVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
               M  AL +A     R     PVG V V   +++ R  +          HAE+ A+R 
Sbjct: 26  DAALMDQALAQAAYGLGRTAPNPPVGCVIVRGGEVVGRGFHPRAGE----PHAEVFALRE 81

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
                  E       YVTLEPC        CA A+  A + R+   A +P       G +
Sbjct: 82  AG-----ERARGATAYVTLEPCSHFGRTPPCADALIRAGVARVVVAALDPNPQVAGRGVE 136

Query: 116 FYTLATCHHSPEIYPGISEQRS 137
               A  H    +  G+ E+ +
Sbjct: 137 RLRAAGLH----VTVGVGEEAA 154


>gi|157865399|ref|XP_001681407.1| deaminase [Leishmania major strain Friedlin]
 gi|68124703|emb|CAJ02761.1| putative deaminase [Leishmania major strain Friedlin]
          Length = 281

 Score = 81.9 bits (202), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 42/196 (21%), Positives = 58/196 (29%), Gaps = 78/196 (39%)

Query: 1   MKKG--NVFMSCALEEAQNAALRNEIPVGAVAVLN--NKII------------------- 37
           M     + FM  AL EA+ A    E+PVG V V    N+ +                   
Sbjct: 1   MSVHYVDTFMRAALREAELALEEGEVPVGCVLVRTEANETVYTKLALQSSDAVTNAPPHA 60

Query: 38  ---------------SRAGNRNRELKDVTAHAEILA----IRMGCRILSQE--------- 69
                          +R  N+        AHAE +A    I    R              
Sbjct: 61  ALLRSCDQLAESCIAARGRNQTNLQHHALAHAEFIAVQKLIDDATRGGDGSAGASSSKTG 120

Query: 70  ---------------------------ILPEVDLYVTLEPCTMCAAAISLARIRRLYYGA 102
                                       L +  LYVT+EPC MC A +   RI  +++G 
Sbjct: 121 ASEGENGVVEEEKQNRLTSPPTTPPLSSLADYVLYVTVEPCVMCGAMLLYNRIAHVFFGC 180

Query: 103 SNPKGGGIENGTQFYT 118
            NP+ GG       + 
Sbjct: 181 RNPRFGGNGTVLALHA 196


>gi|19075322|ref|NP_587822.1| CMP/dCMP deaminase family [Schizosaccharomyces pombe 972h-]
 gi|74627116|sp|P87241|RIB2_SCHPO RecName: Full=Diaminohydroxyphosphoribosylamino-pyrimidine
           deaminase; Short=DRAP deaminase; AltName:
           Full=Riboflavin-specific deaminase
 gi|2213559|emb|CAB09771.1| CMP/dCMP deaminase family [Schizosaccharomyces pombe]
          Length = 405

 Score = 81.9 bits (202), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 36/137 (26%), Positives = 46/137 (33%), Gaps = 23/137 (16%)

Query: 1   MK--KGNVFMSCALEEAQNAALRNEIP------VGAVAVLNNKIISRAGNRNRELKDVTA 52
           MK      +M  AL EA+        P      VGAV V N KI+S   +R R       
Sbjct: 253 MKPYNHEEYMLKALNEAKKCE-----PTDSAFCVGAVIVQNGKIVSTGYSRERPGN---T 304

Query: 53  HAEILAIRMGCRILSQEILPEVDLYVTLEPC-------TMCAAAISLARIRRLYYGASNP 105
           HAE  AI         + L    +Y T+EPC         C   I   +   +  G+  P
Sbjct: 305 HAEECAIEKFMLKNPTDSLEGAIMYSTMEPCSKRLSKKVSCTDLIVKQKFSTVVLGSLEP 364

Query: 106 KGGGIENGTQFYTLATC 122
                  G      A  
Sbjct: 365 DIFVKCEGVDLLKKAGI 381


>gi|198244553|ref|YP_002214370.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Salmonella enterica subsp. enterica serovar
           Dublin str. CT_02021853]
 gi|205351727|ref|YP_002225528.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Salmonella enterica subsp. enterica serovar
           Gallinarum str. 287/91]
 gi|207855897|ref|YP_002242548.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. P125109]
 gi|197939069|gb|ACH76402.1| riboflavin biosynthesis protein RibD [Salmonella enterica subsp.
           enterica serovar Dublin str. CT_02021853]
 gi|205271508|emb|CAR36326.1| riboflavin biosynthesis protein RibD [Salmonella enterica subsp.
           enterica serovar Gallinarum str. 287/91]
 gi|206707700|emb|CAR31984.1| riboflavin biosynthesis protein RibD [Salmonella enterica subsp.
           enterica serovar Enteritidis str. P125109]
 gi|326622118|gb|EGE28463.1| riboflavin biosynthesis protein RibD [Salmonella enterica subsp.
           enterica serovar Dublin str. 3246]
 gi|326626762|gb|EGE33105.1| Riboflavin biosynthesis protein ribD [Salmonella enterica subsp.
           enterica serovar Gallinarum str. 9]
          Length = 367

 Score = 81.9 bits (202), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 36/155 (23%), Positives = 55/155 (35%), Gaps = 21/155 (13%)

Query: 3   KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +   +M+ AL+ AQ      +  P VG V V N  I+    ++         HAE+ A+R
Sbjct: 2   QDEFYMARALKLAQRGRFTTHPNPNVGCVIVNNGDIVGEGYHQRAGE----PHAEVHALR 57

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           M               YVTLEPC        C  A+  A + R+     +P       G 
Sbjct: 58  MAGAKAKGAT-----AYVTLEPCSHHGRTPPCCDALIAAGVARVVAAMQDPNPQVAGRGL 112

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
                A       +  G+    +  + + F K  R
Sbjct: 113 YRLQQAG----IAVSHGLMMSEAEALNKGFLKRMR 143


>gi|148909999|gb|ABR18084.1| unknown [Picea sitchensis]
          Length = 457

 Score = 81.9 bits (202), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 31/152 (20%), Positives = 55/152 (36%), Gaps = 21/152 (13%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           M +   +M   +  A+ A       P VG V V +  I+ +  +          HAE+ A
Sbjct: 88  MPEDAQYMRMCISLAKKALGCTSPNPMVGCVIVKDGHIVGQGFHPKAGE----PHAEVFA 143

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
           +R                YV+LEPC        C  A+  AR+ R+  G  +P       
Sbjct: 144 LREAGTKA-----EGATAYVSLEPCNHYGRTPPCTQALIQARVGRVVVGMVDPNPIVASK 198

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
           G         +   ++  G+ E+  + + + +
Sbjct: 199 GVATLR----NSGIDVTVGVEEKLCQTMNEAY 226


>gi|217076038|gb|ACJ86378.1| 5-amino-6-(5-phosphoribosylamino) uracil reductase [Leuconostoc
           mesenteroides]
          Length = 135

 Score = 81.5 bits (201), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 33/113 (29%), Positives = 49/113 (43%), Gaps = 16/113 (14%)

Query: 3   KGNVFMSCALEEAQNA--ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
               +M  A +EA  A      E P  GAV V + ++I+   +         AHAEI A 
Sbjct: 2   NDLTWMKLAADEAIRAMPYQTFENPRGGAVIVKDGQVITTGYHEKFGE----AHAEINAF 57

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPK 106
               R+ ++       LYVTLEPC+       CA  I    ++R+  G+ +P 
Sbjct: 58  N---RVKNKTEFLGATLYVTLEPCSTHGKVGSCAVQIQNWGLKRVVVGSIDPN 107


>gi|332670474|ref|YP_004453482.1| riboflavin biosynthesis protein RibD [Cellulomonas fimi ATCC 484]
 gi|332339512|gb|AEE46095.1| riboflavin biosynthesis protein RibD [Cellulomonas fimi ATCC 484]
          Length = 395

 Score = 81.5 bits (201), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 28/143 (19%), Positives = 48/143 (33%), Gaps = 21/143 (14%)

Query: 8   MSCALEEAQNAALRNEIP-VGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIR-MGCR 64
           M  A+  A+        P VG V +  +  ++    +        T HAE+ A+R    R
Sbjct: 27  MRQAMLLARRGPRHGANPRVGCVLLTPDGSVVGEGWHA----GAGTPHAEVAALRDAASR 82

Query: 65  ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
            L  +        VTLEPC        C  A+  A +RR+     +P         +   
Sbjct: 83  GLPTD---GATAVVTLEPCDHTGRTGPCTQALLAAGVRRVVVSVPDPNPVAAGGAERLRA 139

Query: 119 LATCHHSPEIYPGISEQRSRQII 141
                   ++   +     R ++
Sbjct: 140 A-----GVDVVTDVLAPDGRTLL 157


>gi|322614696|gb|EFY11625.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 315996572]
 gi|322618802|gb|EFY15690.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 495297-1]
 gi|322623509|gb|EFY20348.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 495297-3]
 gi|322629193|gb|EFY25972.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 495297-4]
 gi|322631913|gb|EFY28667.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 515920-1]
 gi|322637350|gb|EFY34052.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 515920-2]
 gi|322642035|gb|EFY38645.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 531954]
 gi|322647854|gb|EFY44329.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Salmonella enterica subsp. enterica serovar
           Montevideo str. NC_MB110209-0054]
 gi|322652532|gb|EFY48886.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Salmonella enterica subsp. enterica serovar
           Montevideo str. OH_2009072675]
 gi|322653306|gb|EFY49639.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Salmonella enterica subsp. enterica serovar
           Montevideo str. CASC_09SCPH15965]
 gi|322660545|gb|EFY56781.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 19N]
 gi|322664697|gb|EFY60890.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 81038-01]
 gi|322669250|gb|EFY65400.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Salmonella enterica subsp. enterica serovar
           Montevideo str. MD_MDA09249507]
 gi|322670795|gb|EFY66928.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 414877]
 gi|322678966|gb|EFY75021.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 366867]
 gi|322681994|gb|EFY78019.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 413180]
 gi|322685177|gb|EFY81174.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 446600]
 gi|323194475|gb|EFZ79670.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 609458-1]
 gi|323196988|gb|EFZ82130.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 556150-1]
 gi|323203973|gb|EFZ88990.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 609460]
 gi|323206942|gb|EFZ91895.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 507440-20]
 gi|323210840|gb|EFZ95712.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 556152]
 gi|323214531|gb|EFZ99282.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Salmonella enterica subsp. enterica serovar
           Montevideo str. MB101509-0077]
 gi|323223088|gb|EGA07431.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Salmonella enterica subsp. enterica serovar
           Montevideo str. MB102109-0047]
 gi|323227037|gb|EGA11218.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Salmonella enterica subsp. enterica serovar
           Montevideo str. MB110209-0055]
 gi|323230145|gb|EGA14265.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Salmonella enterica subsp. enterica serovar
           Montevideo str. MB111609-0052]
 gi|323233883|gb|EGA17972.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 2009083312]
 gi|323238423|gb|EGA22481.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 2009085258]
 gi|323244111|gb|EGA28120.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 315731156]
 gi|323246271|gb|EGA30254.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2009159199]
 gi|323251897|gb|EGA35760.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2010008282]
 gi|323257894|gb|EGA41573.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2010008283]
 gi|323261093|gb|EGA44685.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2010008284]
 gi|323264977|gb|EGA48476.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2010008285]
 gi|323272540|gb|EGA55947.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2010008287]
          Length = 367

 Score = 81.5 bits (201), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 35/155 (22%), Positives = 55/155 (35%), Gaps = 21/155 (13%)

Query: 3   KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +   +M+ AL+ AQ      +  P VG V V N  I+    ++         HAE+ A+R
Sbjct: 2   QDEFYMARALKLAQRGRFTTHPNPNVGCVIVNNGDIVGEGYHQRAGE----PHAEVHALR 57

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           M               YVTLEPC        C  A+  A + R+     +P       G 
Sbjct: 58  MAGAKAKGAT-----AYVTLEPCSHHGRTPPCCDALIAAGVARVVAAMQDPNPQVAGRGL 112

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
                +       +  G+    +  + + F K  R
Sbjct: 113 YRLQQSG----IAVSHGLMMSEAEALNKGFLKRMR 143


>gi|204927242|ref|ZP_03218444.1| riboflavin biosynthesis protein RibD [Salmonella enterica subsp.
           enterica serovar Javiana str. GA_MM04042433]
 gi|204323907|gb|EDZ09102.1| riboflavin biosynthesis protein RibD [Salmonella enterica subsp.
           enterica serovar Javiana str. GA_MM04042433]
          Length = 367

 Score = 81.5 bits (201), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 36/155 (23%), Positives = 55/155 (35%), Gaps = 21/155 (13%)

Query: 3   KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +   +M+ AL+ AQ      +  P VG V V N  I+    ++         HAE+ A+R
Sbjct: 2   QDEFYMARALKLAQRGRFTTHPNPNVGCVIVNNGDIVGEGYHQRAGE----PHAEVHALR 57

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           M               YVTLEPC        C  A+  A + R+     +P       G 
Sbjct: 58  MAGAKAKGAT-----AYVTLEPCSHHGRTPPCCDALIAAGVARVVAAMQDPNPQVAGRGL 112

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
                A       +  G+    +  + + F K  R
Sbjct: 113 YRLQQAG----IAVSHGLMMSEAEALNKGFLKRMR 143


>gi|291617164|ref|YP_003519906.1| RibD [Pantoea ananatis LMG 20103]
 gi|291152194|gb|ADD76778.1| RibD [Pantoea ananatis LMG 20103]
          Length = 162

 Score = 81.5 bits (201), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 30/106 (28%), Positives = 47/106 (44%), Gaps = 17/106 (16%)

Query: 8   MSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M  ALE ++ A    R   PVG V V + +++++   +         HAEI AI      
Sbjct: 1   MMLALEYSRQALPECRPNPPVGCVIVRDGEVVAKGFTQPPGQH----HAEIDAI-----A 51

Query: 66  LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNP 105
                + E ++YVTLEPC        CA  I+  + + +Y    +P
Sbjct: 52  KLTFPISECEIYVTLEPCSFQGRTPSCALTIAELKPKHIYIAMDDP 97


>gi|215405109|ref|ZP_03417290.1| hypothetical protein Mtub0_15737 [Mycobacterium tuberculosis
           02_1987]
 gi|215412978|ref|ZP_03421679.1| hypothetical protein Mtub9_16461 [Mycobacterium tuberculosis
           94_M4241A]
 gi|215428566|ref|ZP_03426485.1| hypothetical protein MtubT9_20149 [Mycobacterium tuberculosis T92]
 gi|215432070|ref|ZP_03429989.1| hypothetical protein MtubE_15680 [Mycobacterium tuberculosis
           EAS054]
 gi|215447396|ref|ZP_03434148.1| hypothetical protein MtubT_16158 [Mycobacterium tuberculosis T85]
 gi|219559156|ref|ZP_03538232.1| hypothetical protein MtubT1_18372 [Mycobacterium tuberculosis T17]
          Length = 187

 Score = 81.5 bits (201), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 36/133 (27%), Positives = 52/133 (39%), Gaps = 13/133 (9%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIIS-RAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  A++ A++A      P GA  +    + +   GN   E  D  AHAE   +R     L
Sbjct: 36  MELAIDTARHATA----PFGAALLDVTTLRAFSGGNTYFESGDRFAHAETNVLRAAMSTL 91

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIE------NGTQFYTLA 120
               L    L  T EPC MCAAA  L+ +R + +G S              + +     +
Sbjct: 92  --PELSNHVLISTAEPCPMCAAASVLSGVRAIIFGTSIETLIQCGWFQIRISASDVVAAS 149

Query: 121 TCHHSPEIYPGIS 133
           T    P +Y G  
Sbjct: 150 TRPTRPSVYSGFL 162


>gi|15842685|ref|NP_337722.1| hypothetical protein MT3196 [Mycobacterium tuberculosis CDC1551]
 gi|167969723|ref|ZP_02552000.1| cytidine and deoxycytidylate deaminase family protein
           [Mycobacterium tuberculosis H37Ra]
 gi|218754887|ref|ZP_03533683.1| hypothetical protein MtubG1_16264 [Mycobacterium tuberculosis GM
           1503]
 gi|254233738|ref|ZP_04927063.1| conserved hypothetical protein [Mycobacterium tuberculosis C]
 gi|254365742|ref|ZP_04981787.1| conserved hypothetical protein [Mycobacterium tuberculosis str.
           Haarlem]
 gi|254552197|ref|ZP_05142644.1| hypothetical protein Mtube_17378 [Mycobacterium tuberculosis
           '98-R604 INH-RIF-EM']
 gi|308406055|ref|ZP_07494962.2| putative cytidine and deoxycytidylate deaminase zinc-binding region
           [Mycobacterium tuberculosis SUMu012]
 gi|13883005|gb|AAK47536.1| cytidine and deoxycytidylate deaminase family protein
           [Mycobacterium tuberculosis CDC1551]
 gi|124599267|gb|EAY58371.1| conserved hypothetical protein [Mycobacterium tuberculosis C]
 gi|134151255|gb|EBA43300.1| conserved hypothetical protein [Mycobacterium tuberculosis str.
           Haarlem]
 gi|308364666|gb|EFP53517.1| putative cytidine and deoxycytidylate deaminase zinc-binding region
           [Mycobacterium tuberculosis SUMu012]
 gi|323718345|gb|EGB27523.1| hypothetical protein TMMG_02246 [Mycobacterium tuberculosis
           CDC1551A]
          Length = 187

 Score = 81.5 bits (201), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 36/133 (27%), Positives = 52/133 (39%), Gaps = 13/133 (9%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIIS-RAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  A++ A++A      P GA  +    + +   GN   E  D  AHAE   +R     L
Sbjct: 36  MELAIDTARHATA----PFGAALLDVTTLRAFSGGNTYFESGDRFAHAETNVLRAAMSTL 91

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIE------NGTQFYTLA 120
               L    L  T EPC MCAAA  L+ +R + +G S              + +     +
Sbjct: 92  --PELSNHVLISTAEPCPMCAAASVLSGVRAIIFGTSIETLIQCGWFQIRISASDVVAAS 149

Query: 121 TCHHSPEIYPGIS 133
           T    P +Y G  
Sbjct: 150 TRPTRPSVYSGFL 162


>gi|269859573|ref|XP_002649511.1| tRNA-specific adenosine deaminase [Enterocytozoon bieneusi H348]
 gi|220067062|gb|EED44530.1| tRNA-specific adenosine deaminase [Enterocytozoon bieneusi H348]
          Length = 159

 Score = 81.5 bits (201), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 36/120 (30%), Positives = 49/120 (40%), Gaps = 20/120 (16%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
              F + A   A  A ++NE+PVG    +N  I     NR  + KD  AH E LAI    
Sbjct: 2   NEKF-NVAFNAANQARIKNELPVGCAVFINGVIFCTEHNRTNQYKDPLAHCEFLAI---- 56

Query: 64  RILSQEILP-----EVDLYVTLEPCTMCAAAISLAR--IRR--------LYYGASNPKGG 108
             L    L        + Y+TLEPC MC   +   +  I +        +Y+G  N   G
Sbjct: 57  NYLKSVDLRILNIHSCEFYITLEPCVMCYGILIELKNDILKYFPQAKFVVYFGVHNYIFG 116


>gi|302343809|ref|YP_003808338.1| riboflavin biosynthesis protein RibD [Desulfarculus baarsii DSM
           2075]
 gi|301640422|gb|ADK85744.1| riboflavin biosynthesis protein RibD [Desulfarculus baarsii DSM
           2075]
          Length = 377

 Score = 81.5 bits (201), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 33/143 (23%), Positives = 49/143 (34%), Gaps = 21/143 (14%)

Query: 4   GNVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
              FM+ AL   +    R+     VGA+ V   +I+ R  +   +      HAE L    
Sbjct: 10  DRHFMARALALTRRGLGRSSPNPAVGALVVAEGRIVGRGWH--VKKGQP--HAEPL---- 61

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
                +        LYVTLEPC        C  AI  A + R+ YGA +P          
Sbjct: 62  -ALAQAGAAARGATLYVTLEPCNHQGATPPCTQAILRAGVARVVYGAGDPNP----TVAG 116

Query: 116 FYTLATCHHSPEIYPGISEQRSR 138
                       +  G+  ++  
Sbjct: 117 GGGAFLAGRGLAVEAGVLAEQCA 139


>gi|301336274|ref|ZP_07224476.1| riboflavin-specific deaminase [Chlamydia muridarum MopnTet14]
          Length = 368

 Score = 81.5 bits (201), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 35/156 (22%), Positives = 60/156 (38%), Gaps = 23/156 (14%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           ++   FM  A+   +   L    P   VG V V N  +I    ++         HAE+ A
Sbjct: 6   EQQLFFMRKAVALGERGRLFA-PPNPWVGCVIVKNGCVIGEGWHKGIGF----PHAEVCA 60

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
           I+      S   L   ++YVTLEPC        C   +  +++  +Y    +P     + 
Sbjct: 61  IQ-----DSPCSLEGAEVYVTLEPCCHFGRTPPCVDLLIKSKVAAVYVALLDPDPRVCKK 115

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKER 148
           G      A       +Y GI  + ++  +Q +  +R
Sbjct: 116 GIARLREAGIP----VYVGIGSKEAQASLQPYLHQR 147


>gi|227542162|ref|ZP_03972211.1| diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Corynebacterium glucuronolyticum ATCC 51866]
 gi|227181991|gb|EEI62963.1| diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Corynebacterium glucuronolyticum ATCC 51866]
          Length = 324

 Score = 81.5 bits (201), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 31/130 (23%), Positives = 45/130 (34%), Gaps = 21/130 (16%)

Query: 8   MSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M  A+   + A    R    VG   V N ++I+    +         HAEI+A+R     
Sbjct: 1   MDAAITAGEEAVGRARPNPAVGCALVKNGRVIATGSTQRVGG----PHAEIMALRAAG-- 54

Query: 66  LSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
              E       YVTLEPC        C+ A+  A I  + Y   +        G  +   
Sbjct: 55  ---EDARGATAYVTLEPCNHTGRTGPCSLALVEAGIATVVYLTPDTSTPEAAGGGDYLKS 111

Query: 120 ATCHHSPEIY 129
               H  E+ 
Sbjct: 112 ----HGVEVE 117


>gi|89092520|ref|ZP_01165473.1| putative cytosine deaminase [Oceanospirillum sp. MED92]
 gi|89083032|gb|EAR62251.1| putative cytosine deaminase [Oceanospirillum sp. MED92]
          Length = 188

 Score = 81.5 bits (201), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 28/114 (24%), Positives = 45/114 (39%), Gaps = 4/114 (3%)

Query: 13  EEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELK-DVTAHAEILAIRMG-CRILSQE 69
           + A  A       VGAV +    + ++   N+      +   HAE+  +     R     
Sbjct: 35  QLAFAALEEGNYGVGAVLLDRQGECLAVGSNQVFSQGFNSAGHAEMNLLDDFEARYDDYP 94

Query: 70  ILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123
               + L V+LEPC MC A I  A I R+ Y   + + GG+ +       A  +
Sbjct: 95  DRAGLTLLVSLEPCPMCTARILAAGIGRVIYLVED-QLGGMLSHCDRLPDAWVN 147


>gi|255940482|ref|XP_002561010.1| Pc16g06760 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211585633|emb|CAP93346.1| Pc16g06760 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 158

 Score = 81.5 bits (201), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 24/97 (24%), Positives = 38/97 (39%), Gaps = 1/97 (1%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +   +E A+ A      P G+V V +  K++    NR     DVT H E        + L
Sbjct: 10  LRRCVELARQALEAGNSPFGSVLVDSTGKVLKEDQNRTITEADVTLHPEFTLANWAQKHL 69

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
                    +Y + E C MC    +   + R+ Y +S
Sbjct: 70  PLAERTATTVYTSGEHCPMCTTIHANVGLGRIVYASS 106


>gi|163854921|ref|YP_001629219.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Bordetella petrii DSM 12804]
 gi|163258649|emb|CAP40948.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Bordetella petrii]
          Length = 380

 Score = 81.5 bits (201), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 34/150 (22%), Positives = 52/150 (34%), Gaps = 18/150 (12%)

Query: 3   KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
              ++M  AL  A+         P VG V V + +++     +         HAEI A+R
Sbjct: 8   DDLIWMRRALALARTVMYTTTPNPRVGCVIVRDGRVLGEGATQPPGG----PHAEICALR 63

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
                   E +    LYVTLEPC        CA A++ A   R+     +P       G 
Sbjct: 64  DAAAR--GESVQGATLYVTLEPCSHYGRTPPCADAVAAAGPARVVVAMGDPNPQVRGQGL 121

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
                A       +   +    + +I   F
Sbjct: 122 ARLRAAG----IAVTSNVCLDEALEINAGF 147


>gi|326538505|gb|ADZ86720.1| riboflavin biosynthesis protein RibD [Brucella melitensis M5-90]
          Length = 373

 Score = 81.5 bits (201), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 31/141 (21%), Positives = 47/141 (33%), Gaps = 21/141 (14%)

Query: 7   FMSCALEEAQ--NAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           FM   +  A+           VG + V +  I+ R             HAE  A+     
Sbjct: 18  FMEATIRYARRHKGLTGTNPSVGTIIVKDGVIVGRG----VTALGGRPHAEPQALAEVGE 73

Query: 65  ILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
                       YVTLEPC        CA A+  + + R+   A++P       G     
Sbjct: 74  AA-----RGATAYVTLEPCAHHGRTPPCAEALVRSGVARVVVAATDPDERVSGKGFAILR 128

Query: 119 LATCHHSPEIYPGISEQRSRQ 139
            A      E+ PGI  +++  
Sbjct: 129 EAG----IEVVPGILSEQAAD 145


>gi|115524816|ref|YP_781727.1| riboflavin biosynthesis protein RibD [Rhodopseudomonas palustris
           BisA53]
 gi|115518763|gb|ABJ06747.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase /
           diaminohydroxyphosphoribosylaminopyrimidine deaminase
           [Rhodopseudomonas palustris BisA53]
          Length = 383

 Score = 81.5 bits (201), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 30/118 (25%), Positives = 42/118 (35%), Gaps = 17/118 (14%)

Query: 4   GNVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
              +M  AL   +           VGAV V +  I+ R   + R       HAE+ A+  
Sbjct: 21  DLRYMQLALALGRRGLGNTWPNPAVGAVIVKDGVIVGRGWTQPRGR----PHAEVEAL-- 74

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113
                + E      LYVTLEPC        C  A+  A + R+     +P       G
Sbjct: 75  ---ARAGEAARGATLYVTLEPCSHHGKTPPCCDAVIEAGLARVVAAIEDPNPEVAGQG 129


>gi|15610251|ref|NP_217630.1| hypothetical protein Rv3114 [Mycobacterium tuberculosis H37Rv]
 gi|148662968|ref|YP_001284491.1| hypothetical protein MRA_3146 [Mycobacterium tuberculosis H37Ra]
 gi|148824307|ref|YP_001289061.1| hypothetical protein TBFG_13134 [Mycobacterium tuberculosis F11]
 gi|253800146|ref|YP_003033147.1| hypothetical protein TBMG_03158 [Mycobacterium tuberculosis KZN
           1435]
 gi|289555386|ref|ZP_06444596.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 605]
 gi|289763297|ref|ZP_06522675.1| cytosine/adenosine deaminase [Mycobacterium tuberculosis GM 1503]
 gi|297635752|ref|ZP_06953532.1| hypothetical protein MtubK4_16592 [Mycobacterium tuberculosis KZN
           4207]
 gi|297732750|ref|ZP_06961868.1| hypothetical protein MtubKR_16752 [Mycobacterium tuberculosis KZN
           R506]
 gi|313660083|ref|ZP_07816963.1| hypothetical protein MtubKV_16757 [Mycobacterium tuberculosis KZN
           V2475]
 gi|2076689|emb|CAB08371.1| CONSERVED HYPOTHETICAL PROTEIN [Mycobacterium tuberculosis H37Rv]
 gi|148507120|gb|ABQ74929.1| conserved hypothetical protein [Mycobacterium tuberculosis H37Ra]
 gi|148722834|gb|ABR07459.1| conserved hypothetical protein [Mycobacterium tuberculosis F11]
 gi|253321649|gb|ACT26252.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN
           1435]
 gi|289440018|gb|EFD22511.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 605]
 gi|289710803|gb|EFD74819.1| cytosine/adenosine deaminase [Mycobacterium tuberculosis GM 1503]
 gi|328459884|gb|AEB05307.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN
           4207]
          Length = 176

 Score = 81.1 bits (200), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 36/133 (27%), Positives = 52/133 (39%), Gaps = 13/133 (9%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIIS-RAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  A++ A++A      P GA  +    + +   GN   E  D  AHAE   +R     L
Sbjct: 25  MELAIDTARHATA----PFGAALLDVTTLRAFSGGNTYFESGDRFAHAETNVLRAAMSTL 80

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIE------NGTQFYTLA 120
               L    L  T EPC MCAAA  L+ +R + +G S              + +     +
Sbjct: 81  --PELSNHVLISTAEPCPMCAAASVLSGVRAIIFGTSIETLIQCGWFQIRISASDVVAAS 138

Query: 121 TCHHSPEIYPGIS 133
           T    P +Y G  
Sbjct: 139 TRPTRPSVYSGFL 151


>gi|329891051|ref|ZP_08269394.1| riboflavin biosynthesis protein ribD [Brevundimonas diminuta ATCC
           11568]
 gi|328846352|gb|EGF95916.1| riboflavin biosynthesis protein ribD [Brevundimonas diminuta ATCC
           11568]
          Length = 209

 Score = 81.1 bits (200), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 32/152 (21%), Positives = 54/152 (35%), Gaps = 32/152 (21%)

Query: 3   KGNVFMSCALEEA--QNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTA-----HAE 55
           +  VFM  A++ A  +         VG V V +  +++ A          TA     HAE
Sbjct: 6   QDAVFMRRAIDLALSRMGETWPNPAVGCVLVKDGVVLAEA---------ATAPGGRPHAE 56

Query: 56  ILAIRMGCRILSQEILPEVDLYVTLEPCTM-------CAAAISLARIRRLYYGASNPKGG 108
             A+      +          YVTLEPC         CA  ++ A + R+   A +P   
Sbjct: 57  EQAVPEAGEAV-----KGATAYVTLEPCGARSSGRKSCAHFLAEAGVERVVIAALDPSPF 111

Query: 109 GIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140
               GT+    +       +  G+  + +  +
Sbjct: 112 ASGRGTERLRHSGL----TVETGLLCEEASVL 139


>gi|31794293|ref|NP_856786.1| hypothetical protein Mb3141 [Mycobacterium bovis AF2122/97]
 gi|121638999|ref|YP_979223.1| hypothetical protein BCG_3139 [Mycobacterium bovis BCG str. Pasteur
           1173P2]
 gi|224991491|ref|YP_002646180.1| hypothetical protein JTY_3134 [Mycobacterium bovis BCG str. Tokyo
           172]
 gi|260188150|ref|ZP_05765624.1| hypothetical protein MtubCP_19308 [Mycobacterium tuberculosis
           CPHL_A]
 gi|260202256|ref|ZP_05769747.1| hypothetical protein MtubT4_19746 [Mycobacterium tuberculosis T46]
 gi|260206449|ref|ZP_05773940.1| hypothetical protein MtubK8_19337 [Mycobacterium tuberculosis K85]
 gi|289444678|ref|ZP_06434422.1| conserved hypothetical protein [Mycobacterium tuberculosis T46]
 gi|289448793|ref|ZP_06438537.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A]
 gi|289571322|ref|ZP_06451549.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
 gi|289575826|ref|ZP_06456053.1| conserved hypothetical protein [Mycobacterium tuberculosis K85]
 gi|289746924|ref|ZP_06506302.1| cytidine and deoxycytidylate deaminase [Mycobacterium tuberculosis
           02_1987]
 gi|289751790|ref|ZP_06511168.1| conserved hypothetical protein [Mycobacterium tuberculosis T92]
 gi|289755233|ref|ZP_06514611.1| cytidine and deoxycytidylate deaminase [Mycobacterium tuberculosis
           EAS054]
 gi|289759241|ref|ZP_06518619.1| cytidine and deoxycytidylate deaminase [Mycobacterium tuberculosis
           T85]
 gi|294993219|ref|ZP_06798910.1| hypothetical protein Mtub2_01607 [Mycobacterium tuberculosis 210]
 gi|298526587|ref|ZP_07013996.1| conserved hypothetical protein [Mycobacterium tuberculosis
           94_M4241A]
 gi|31619888|emb|CAD96828.1| CONSERVED HYPOTHETICAL PROTEIN [Mycobacterium bovis AF2122/97]
 gi|121494647|emb|CAL73128.1| Conserved hypothetical protein [Mycobacterium bovis BCG str.
           Pasteur 1173P2]
 gi|224774606|dbj|BAH27412.1| hypothetical protein JTY_3134 [Mycobacterium bovis BCG str. Tokyo
           172]
 gi|289417597|gb|EFD14837.1| conserved hypothetical protein [Mycobacterium tuberculosis T46]
 gi|289421751|gb|EFD18952.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A]
 gi|289540257|gb|EFD44835.1| conserved hypothetical protein [Mycobacterium tuberculosis K85]
 gi|289545076|gb|EFD48724.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
 gi|289687452|gb|EFD54940.1| cytidine and deoxycytidylate deaminase [Mycobacterium tuberculosis
           02_1987]
 gi|289692377|gb|EFD59806.1| conserved hypothetical protein [Mycobacterium tuberculosis T92]
 gi|289695820|gb|EFD63249.1| cytidine and deoxycytidylate deaminase [Mycobacterium tuberculosis
           EAS054]
 gi|289714805|gb|EFD78817.1| cytidine and deoxycytidylate deaminase [Mycobacterium tuberculosis
           T85]
 gi|298496381|gb|EFI31675.1| conserved hypothetical protein [Mycobacterium tuberculosis
           94_M4241A]
 gi|326902663|gb|EGE49596.1| hypothetical protein TBPG_00512 [Mycobacterium tuberculosis W-148]
          Length = 176

 Score = 81.1 bits (200), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 36/133 (27%), Positives = 52/133 (39%), Gaps = 13/133 (9%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIIS-RAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  A++ A++A      P GA  +    + +   GN   E  D  AHAE   +R     L
Sbjct: 25  MELAIDTARHATA----PFGAALLDVTTLRAFSGGNTYFESGDRFAHAETNVLRAAMSTL 80

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIE------NGTQFYTLA 120
               L    L  T EPC MCAAA  L+ +R + +G S              + +     +
Sbjct: 81  --PELSNHVLISTAEPCPMCAAASVLSGVRAIIFGTSIETLIQCGWFQIRISASDVVAAS 138

Query: 121 TCHHSPEIYPGIS 133
           T    P +Y G  
Sbjct: 139 TRPTRPSVYSGFL 151


>gi|146079218|ref|XP_001463726.1| deaminase [Leishmania infantum JPCM5]
 gi|134067813|emb|CAM66093.1| putative deaminase [Leishmania infantum JPCM5]
 gi|322497125|emb|CBZ32196.1| unnamed protein product [Leishmania donovani BPK282A1]
          Length = 281

 Score = 81.1 bits (200), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 41/198 (20%), Positives = 56/198 (28%), Gaps = 78/198 (39%)

Query: 1   MKKG--NVFMSCALEEAQNAALRNEIPVGAVAVLNNK----------------------- 35
           M     + FM  AL EA+ A    E+PVG   V  +                        
Sbjct: 1   MSVHYVDAFMRAALREAELALEEGEVPVGCALVRTDANETVYAKLALQSSDAVTNAPPHA 60

Query: 36  -------------IISRAGNRNRELKDVTAHAEILA----IRMGCRILSQEI-------- 70
                        I +R  N+        AHAE +A    I    R              
Sbjct: 61  ASSLRCDQLVESCIAARGRNQTNLQHHALAHAEFIAVQKLIDDATRGGDGSAGASSSKAG 120

Query: 71  ----------------------------LPEVDLYVTLEPCTMCAAAISLARIRRLYYGA 102
                                       L +  LYVT+EPC MC A +   RI  +++G 
Sbjct: 121 AGEGEKELVEDGKQNGLTSSPTTPPLSGLADYVLYVTVEPCVMCGAMLLYNRIAHVFFGC 180

Query: 103 SNPKGGGIENGTQFYTLA 120
            NP+ GG       +   
Sbjct: 181 RNPRFGGNGTVLALHASP 198


>gi|167551773|ref|ZP_02345526.1| riboflavin biosynthesis protein RibD [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA29]
 gi|205323400|gb|EDZ11239.1| riboflavin biosynthesis protein RibD [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA29]
          Length = 367

 Score = 81.1 bits (200), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 36/155 (23%), Positives = 54/155 (34%), Gaps = 21/155 (13%)

Query: 3   KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +   +M+ AL+ AQ      +  P VG V V N  I+    +          HAE+ A+R
Sbjct: 2   QDEFYMARALKLAQRGRFTTHPNPNVGCVIVNNGDIVGEGYHHRAGE----PHAEVHALR 57

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           M               YVTLEPC        C  A+  A + R+     +P       G 
Sbjct: 58  MAGAKAKGAT-----AYVTLEPCSHHGRTPPCCDALIAAGVARVVAAMQDPNPQVAGRGL 112

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
                A       +  G+    +  + + F K  R
Sbjct: 113 YRLQQAG----IAVSHGLMMSEAEALNKGFLKRMR 143


>gi|308232338|ref|ZP_07415761.2| hypothetical protein TMAG_03287 [Mycobacterium tuberculosis
           SUMu001]
 gi|308369958|ref|ZP_07419664.2| hypothetical protein TMBG_03264 [Mycobacterium tuberculosis
           SUMu002]
 gi|308371237|ref|ZP_07424291.2| hypothetical protein TMCG_01530 [Mycobacterium tuberculosis
           SUMu003]
 gi|308372428|ref|ZP_07428645.2| hypothetical protein TMDG_03356 [Mycobacterium tuberculosis
           SUMu004]
 gi|308373631|ref|ZP_07433119.2| hypothetical protein TMEG_02388 [Mycobacterium tuberculosis
           SUMu005]
 gi|308374775|ref|ZP_07437361.2| hypothetical protein TMFG_00317 [Mycobacterium tuberculosis
           SUMu006]
 gi|308375992|ref|ZP_07445762.2| hypothetical protein TMGG_02655 [Mycobacterium tuberculosis
           SUMu007]
 gi|308377225|ref|ZP_07441571.2| hypothetical protein TMHG_02325 [Mycobacterium tuberculosis
           SUMu008]
 gi|308378194|ref|ZP_07481857.2| hypothetical protein TMIG_02622 [Mycobacterium tuberculosis
           SUMu009]
 gi|308379415|ref|ZP_07486201.2| hypothetical protein TMJG_03286 [Mycobacterium tuberculosis
           SUMu010]
 gi|308380574|ref|ZP_07490420.2| hypothetical protein TMKG_02361 [Mycobacterium tuberculosis
           SUMu011]
 gi|308214311|gb|EFO73710.1| hypothetical protein TMAG_03287 [Mycobacterium tuberculosis
           SUMu001]
 gi|308325963|gb|EFP14814.1| hypothetical protein TMBG_03264 [Mycobacterium tuberculosis
           SUMu002]
 gi|308329489|gb|EFP18340.1| hypothetical protein TMCG_01530 [Mycobacterium tuberculosis
           SUMu003]
 gi|308333335|gb|EFP22186.1| hypothetical protein TMDG_03356 [Mycobacterium tuberculosis
           SUMu004]
 gi|308336989|gb|EFP25840.1| hypothetical protein TMEG_02388 [Mycobacterium tuberculosis
           SUMu005]
 gi|308340803|gb|EFP29654.1| hypothetical protein TMFG_00317 [Mycobacterium tuberculosis
           SUMu006]
 gi|308344671|gb|EFP33522.1| hypothetical protein TMGG_02655 [Mycobacterium tuberculosis
           SUMu007]
 gi|308348621|gb|EFP37472.1| hypothetical protein TMHG_02325 [Mycobacterium tuberculosis
           SUMu008]
 gi|308353346|gb|EFP42197.1| hypothetical protein TMIG_02622 [Mycobacterium tuberculosis
           SUMu009]
 gi|308357180|gb|EFP46031.1| hypothetical protein TMJG_03286 [Mycobacterium tuberculosis
           SUMu010]
 gi|308361131|gb|EFP49982.1| hypothetical protein TMKG_02361 [Mycobacterium tuberculosis
           SUMu011]
          Length = 161

 Score = 81.1 bits (200), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 36/133 (27%), Positives = 52/133 (39%), Gaps = 13/133 (9%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIIS-RAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  A++ A++A      P GA  +    + +   GN   E  D  AHAE   +R     L
Sbjct: 10  MELAIDTARHATA----PFGAALLDVTTLRAFSGGNTYFESGDRFAHAETNVLRAAMSTL 65

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIE------NGTQFYTLA 120
               L    L  T EPC MCAAA  L+ +R + +G S              + +     +
Sbjct: 66  --PELSNHVLISTAEPCPMCAAASVLSGVRAIIFGTSIETLIQCGWFQIRISASDVVAAS 123

Query: 121 TCHHSPEIYPGIS 133
           T    P +Y G  
Sbjct: 124 TRPTRPSVYSGFL 136


>gi|209964642|ref|YP_002297557.1| riboflavin biosynthesis protein RibD [Rhodospirillum centenum SW]
 gi|209958108|gb|ACI98744.1| riboflavin biosynthesis protein RibD [Rhodospirillum centenum SW]
          Length = 379

 Score = 81.1 bits (200), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 35/156 (22%), Positives = 51/156 (32%), Gaps = 21/156 (13%)

Query: 2   KKGNVFMSCALEEAQNAALR-NEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
            +    M  AL  A     R    P VG V V   +++ R             H E  A+
Sbjct: 14  DQDRAHMRAALTLAARGLGRVWPNPSVGCVLVREGRVVGRG----VTGAGGRPHGETEAL 69

Query: 60  RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113
           R        E       YV+LEPC        C  A+  A + R+     +P       G
Sbjct: 70  RQAG-----EQARGATAYVSLEPCNHHGRTPPCTEALMAAGVARVVVACEDPDPRVSGGG 124

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
                 A      E+  G+ E  ++++   FF   R
Sbjct: 125 LARLRAAGL----EVASGLLEAEAQELNAGFFLRIR 156


>gi|238911451|ref|ZP_04655288.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Salmonella enterica subsp. enterica serovar
           Tennessee str. CDC07-0191]
          Length = 367

 Score = 81.1 bits (200), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 36/155 (23%), Positives = 54/155 (34%), Gaps = 21/155 (13%)

Query: 3   KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +   +M+ AL+ AQ      +  P VG V V N  I+    +          HAE+ A+R
Sbjct: 2   QDEFYMARALKLAQRGRFTTHPNPNVGCVIVNNGDIVGEGYHHRAGE----PHAEVHALR 57

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           M               YVTLEPC        C  A+  A + R+     +P       G 
Sbjct: 58  MAGAKAKGAT-----AYVTLEPCSHHGRTPPCCDALIAAGVARVVAAMQDPNPQVAGRGL 112

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
                A       +  G+    +  + + F K  R
Sbjct: 113 YRLQQAG----IAVSHGLMMSEAEALNKGFLKRMR 143


>gi|66824069|ref|XP_645389.1| hypothetical protein DDB_G0272030 [Dictyostelium discoideum AX4]
 gi|60473505|gb|EAL71449.1| hypothetical protein DDB_G0272030 [Dictyostelium discoideum AX4]
          Length = 225

 Score = 81.1 bits (200), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 26/140 (18%), Positives = 51/140 (36%), Gaps = 14/140 (10%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
            + +M  A++ A     +      A  V  N  ++  G           H E+ AI    
Sbjct: 52  HSKYMQIAIDIAIENNSK----FAAAIVHKNGTVACTG--VNVGGSRMYHGEVKAIMNCT 105

Query: 64  RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG--------IENGTQ 115
            +  Q    +  LY T EPC MC+AAI   + +++ + +               +++   
Sbjct: 106 TMYQQATWEDYSLYTTGEPCPMCSAAIMWTKFQKVIFASYVSNMYCERCFNQLPMDSNEI 165

Query: 116 FYTLATCHHSPEIYPGISEQ 135
           F      +H+  +  G+ + 
Sbjct: 166 FKLGYGINHNIVVIGGVLDN 185


>gi|213163224|ref|ZP_03348934.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Salmonella enterica subsp. enterica serovar
           Typhi str. E00-7866]
          Length = 367

 Score = 81.1 bits (200), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 36/155 (23%), Positives = 54/155 (34%), Gaps = 21/155 (13%)

Query: 3   KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +   +M+ AL+ AQ      +  P VG V V N  I+    +          HAE+ A+R
Sbjct: 2   QDEFYMARALKLAQRGRFTTHPNPNVGCVIVNNGDIVGEGYHHRAGE----PHAEVHALR 57

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           M               YVTLEPC        C  A+  A + R+     +P       G 
Sbjct: 58  MAGAKAKGAT-----AYVTLEPCSHHGRTPPCCDALIAAGVARVVAAMQDPNPQVAGRGL 112

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
                A       +  G+    +  + + F K  R
Sbjct: 113 YRLQQAG----IAVSHGLMMSEAEALNKGFLKRMR 143


>gi|23008993|ref|ZP_00050209.1| COG1985: Pyrimidine reductase, riboflavin biosynthesis
           [Magnetospirillum magnetotacticum MS-1]
          Length = 284

 Score = 81.1 bits (200), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 34/140 (24%), Positives = 47/140 (33%), Gaps = 21/140 (15%)

Query: 8   MSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M  AL   +    R      VGAV V   +I+ +A            HAE LA+ M    
Sbjct: 19  MRLALALGRRNLGRTWPNPSVGAVVVAEGRIVGQA----VTAPGGRPHAEPLALAMAGEA 74

Query: 66  LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
                     LYVTLEPC        C  A   + IRR+     +P       G      
Sbjct: 75  A-----RGATLYVTLEPCSHYGRTPPCTEATIASGIRRVVTAIEDPDPRVAGRGHAQLRA 129

Query: 120 ATCHHSPEIYPGISEQRSRQ 139
           A       +  G+  + + +
Sbjct: 130 AGL----TVETGLLREEAAR 145


>gi|323357080|ref|YP_004223476.1| pyrimidine reductase, riboflavin biosynthesis [Microbacterium
           testaceum StLB037]
 gi|323273451|dbj|BAJ73596.1| pyrimidine reductase, riboflavin biosynthesis [Microbacterium
           testaceum StLB037]
          Length = 343

 Score = 81.1 bits (200), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 32/144 (22%), Positives = 55/144 (38%), Gaps = 20/144 (13%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  AL+ A+         VGAV +    +I++   +R       TAHAE+ A+      L
Sbjct: 10  MRRALQLARRGPRGLNPQVGAVILSPAGEILAEGYHR----GAGTAHAEVDALSQ----L 61

Query: 67  SQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
           +          VTLEPC        CA A+  A + R+ +   +P         +     
Sbjct: 62  APGAARGATAVVTLEPCNHTGRTGPCAVALIEAGVARVVFALDDPTDAASGGAERLRAA- 120

Query: 121 TCHHSPEIYPGISEQRSRQIIQDF 144
                 ++  G  E+ +  ++ D+
Sbjct: 121 ----GVDVEQGPEEESAEALVHDW 140


>gi|168232389|ref|ZP_02657447.1| riboflavin biosynthesis protein RibD [Salmonella enterica subsp.
           enterica serovar Kentucky str. CDC 191]
 gi|194470692|ref|ZP_03076676.1| riboflavin biosynthesis protein RibD [Salmonella enterica subsp.
           enterica serovar Kentucky str. CVM29188]
 gi|194457056|gb|EDX45895.1| riboflavin biosynthesis protein RibD [Salmonella enterica subsp.
           enterica serovar Kentucky str. CVM29188]
 gi|205333401|gb|EDZ20165.1| riboflavin biosynthesis protein RibD [Salmonella enterica subsp.
           enterica serovar Kentucky str. CDC 191]
          Length = 367

 Score = 81.1 bits (200), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 36/155 (23%), Positives = 54/155 (34%), Gaps = 21/155 (13%)

Query: 3   KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +   +M+ AL+ AQ      +  P VG V V N  I+    +          HAE+ A+R
Sbjct: 2   QDEFYMARALKLAQRGRFTTHPNPNVGCVIVNNGDIVGEGYHHRAGE----PHAEVHALR 57

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           M               YVTLEPC        C  A+  A + R+     +P       G 
Sbjct: 58  MAGAKAKGAT-----AYVTLEPCSHHGRTPPCCDALIAAGVARVVAAMQDPNPQVAGRGL 112

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
                A       +  G+    +  + + F K  R
Sbjct: 113 YRLQQAG----IAVSHGLMMSEAEALNKGFLKRMR 143


>gi|56414429|ref|YP_151504.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Salmonella enterica subsp. enterica serovar
           Paratyphi A str. ATCC 9150]
 gi|168818973|ref|ZP_02830973.1| riboflavin biosynthesis protein RibD [Salmonella enterica subsp.
           enterica serovar Weltevreden str. HI_N05-537]
 gi|197363349|ref|YP_002142986.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Salmonella enterica subsp. enterica serovar
           Paratyphi A str. AKU_12601]
 gi|200389971|ref|ZP_03216582.1| riboflavin biosynthesis protein RibD [Salmonella enterica subsp.
           enterica serovar Virchow str. SL491]
 gi|56128686|gb|AAV78192.1| riboflavin biosynthesis protein RibD [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. ATCC 9150]
 gi|197094826|emb|CAR60359.1| riboflavin biosynthesis protein RibD [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. AKU_12601]
 gi|199602416|gb|EDZ00962.1| riboflavin biosynthesis protein RibD [Salmonella enterica subsp.
           enterica serovar Virchow str. SL491]
 gi|205344221|gb|EDZ30985.1| riboflavin biosynthesis protein RibD [Salmonella enterica subsp.
           enterica serovar Weltevreden str. HI_N05-537]
 gi|320084692|emb|CBY94483.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Salmonella enterica subsp. enterica serovar Weltevreden
           str. 2007-60-3289-1]
          Length = 367

 Score = 81.1 bits (200), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 36/155 (23%), Positives = 54/155 (34%), Gaps = 21/155 (13%)

Query: 3   KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +   +M+ AL+ AQ      +  P VG V V N  I+    +          HAE+ A+R
Sbjct: 2   QDEFYMARALKLAQRGRFTTHPNPNVGCVIVNNGDIVGEGYHHRAGE----PHAEVHALR 57

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           M               YVTLEPC        C  A+  A + R+     +P       G 
Sbjct: 58  MAGAKAKGAT-----AYVTLEPCSHHGRTPPCCDALIAAGVARVVAAMQDPNPQVAGRGL 112

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
                A       +  G+    +  + + F K  R
Sbjct: 113 YRLQQAG----IAVSHGLMMSEAEALNKGFLKRMR 143


>gi|120612202|ref|YP_971880.1| riboflavin biosynthesis protein RibD [Acidovorax citrulli AAC00-1]
 gi|120590666|gb|ABM34106.1| riboflavin biosynthesis protein RibD [Acidovorax citrulli AAC00-1]
          Length = 377

 Score = 81.1 bits (200), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 39/149 (26%), Positives = 57/149 (38%), Gaps = 19/149 (12%)

Query: 8   MSCALEEAQNAALRNEI-P-VGAVAVLNNK-IISRAGNRNRELKDVTAHAEILAIRMGCR 64
           M  AL+ A++   R    P VG V V   + II +   +         HAE++A+R    
Sbjct: 14  MQLALQLAEDGLYRTSPNPRVGCVLVNAGQQIIGQGSTQRAGG----PHAEVMALRDARA 69

Query: 65  ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
                       YVTLEPC+       C  A+  A I R+    ++P       G +   
Sbjct: 70  RGHATH--GATAYVTLEPCSHHGRTGPCCDALVEAGIARVVASLADPNPLVAGQGFERLR 127

Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKE 147
            A      E+ PG     SR++   FF  
Sbjct: 128 GAGV--QVEVGPG--AAASRELNIGFFSR 152


>gi|78046481|ref|YP_362656.1| hypothetical protein XCV0925 [Xanthomonas campestris pv.
           vesicatoria str. 85-10]
 gi|78034911|emb|CAJ22556.1| conserved hypothetical protein [Xanthomonas campestris pv.
           vesicatoria str. 85-10]
          Length = 186

 Score = 81.1 bits (200), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 36/149 (24%), Positives = 60/149 (40%), Gaps = 17/149 (11%)

Query: 10  CALEEAQ-NAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
            A+E ++ N   R+  P GAV    +++II+ A NR        AHAE +A  +  + L 
Sbjct: 33  LAIELSRMNVRERSGGPFGAVVFGPDHRIIAAAVNRVVPQTTSLAHAENMAYMLAQQRLQ 92

Query: 68  QEILPEV----DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA--- 120
              L +V     L  + +PC  C  A   A I RL  GA       +   TQF       
Sbjct: 93  TPRLNDVLSPVALATSAQPCCQCYGATVWAGIDRLLIGARADDVMAL---TQFDEGPLPA 149

Query: 121 -----TCHHSPEIYPGISEQRSRQIIQDF 144
                      E+   +   ++  +++++
Sbjct: 150 DWVGELSRRGIEVVRDVLRDQACAVLRNY 178


>gi|288800423|ref|ZP_06405881.1| riboflavin biosynthesis protein RibD [Prevotella sp. oral taxon 299
           str. F0039]
 gi|288332636|gb|EFC71116.1| riboflavin biosynthesis protein RibD [Prevotella sp. oral taxon 299
           str. F0039]
          Length = 341

 Score = 81.1 bits (200), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 35/152 (23%), Positives = 59/152 (38%), Gaps = 20/152 (13%)

Query: 3   KGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
               +M   ++ A N       P   VG+V V++ +II    +         AHAE+ A 
Sbjct: 32  THERYMQRCIDLALNG-KEGAKPNPMVGSVIVVDGRIIGEGYHIEYGK----AHAEVNAF 86

Query: 60  RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113
                   + +LP+  LYV LEPC        CA  I    ++++  G  +P       G
Sbjct: 87  -ASVDAKDEHLLPKATLYVNLEPCSHFGKTPPCADLIISKGVKKVVVGCVDPYSEVRGRG 145

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
            +    A      ++  G+ E+    + + FF
Sbjct: 146 IERLRKAG----VKVLVGVLEKECLFLNR-FF 172


>gi|294885496|ref|XP_002771343.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
 gi|239874872|gb|EER03159.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
          Length = 76

 Score = 81.1 bits (200), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 21/56 (37%), Positives = 30/56 (53%)

Query: 3  KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
              FM  AL  AQ A   +E+PVG   V N  +++ AGN     ++ T HAE++A
Sbjct: 18 DDKRFMRLALAAAQEAYDTDEVPVGCAFVSNGVVLATAGNETNHTRNATRHAELVA 73


>gi|16759393|ref|NP_455010.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Salmonella enterica subsp. enterica serovar
           Typhi str. CT18]
 gi|29142835|ref|NP_806177.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Salmonella enterica subsp. enterica serovar
           Typhi str. Ty2]
 gi|213427850|ref|ZP_03360600.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Salmonella enterica subsp. enterica serovar
           Typhi str. E02-1180]
 gi|213650168|ref|ZP_03380221.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Salmonella enterica subsp. enterica serovar
           Typhi str. J185]
 gi|213855380|ref|ZP_03383620.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Salmonella enterica subsp. enterica serovar
           Typhi str. M223]
 gi|289825059|ref|ZP_06544411.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Salmonella enterica subsp. enterica serovar
           Typhi str. E98-3139]
 gi|25331497|pir||AH0553 riboflavin biosynthesis protein RibD [imported] - Salmonella
           enterica subsp. enterica serovar Typhi (strain CT18)
 gi|16501684|emb|CAD08872.1| riboflavin biosynthesis protein RibD [Salmonella enterica subsp.
           enterica serovar Typhi]
 gi|29138467|gb|AAO70037.1| riboflavin biosynthesis protein RibD [Salmonella enterica subsp.
           enterica serovar Typhi str. Ty2]
          Length = 367

 Score = 81.1 bits (200), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 36/155 (23%), Positives = 54/155 (34%), Gaps = 21/155 (13%)

Query: 3   KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +   +M+ AL+ AQ      +  P VG V V N  I+    +          HAE+ A+R
Sbjct: 2   QDEFYMARALKLAQRGRFTTHPNPNVGCVIVNNGDIVGEGYHHRAGE----PHAEVHALR 57

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           M               YVTLEPC        C  A+  A + R+     +P       G 
Sbjct: 58  MAGAKAKGAT-----AYVTLEPCSHHGRTPPCCDALIAAGVARVVAAMQDPNPQVAGRGL 112

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
                A       +  G+    +  + + F K  R
Sbjct: 113 YRLQQAG----IAVSHGLMMSEAEALNKGFLKRMR 143


>gi|15805190|ref|NP_293877.1| riboflavin-specific deaminase [Deinococcus radiodurans R1]
 gi|6457821|gb|AAF09742.1|AE001878_1 riboflavin-specific deaminase [Deinococcus radiodurans R1]
          Length = 357

 Score = 81.1 bits (200), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 38/149 (25%), Positives = 54/149 (36%), Gaps = 25/149 (16%)

Query: 4   GNVFMSCALEEAQNAALRN--EIPVGAVAVLNNKI----ISRAGNRNRELKDVTAHAEIL 57
              +M  AL EA     R     PVG V V + +I    + R  +          HAE+ 
Sbjct: 8   DAEYMQLALNEAAKGLGRTSPNPPVGCVIVRDGEIASEIVGRGFHPKAGE----PHAEVF 63

Query: 58  AIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIE 111
           A+R        E       YVTLEPC        CA A+  A + R+   A +P      
Sbjct: 64  ALREAG-----ERARGATAYVTLEPCSHDGRTPPCADALIAAGVARVVVAAGDPNPQVNG 118

Query: 112 NGTQFYTLATCHHSPEIYPGISEQRSRQI 140
            G +    A      E+  G+ E  + + 
Sbjct: 119 RGLEKLRAAG----IEVATGVLEAAAVRQ 143


>gi|168261151|ref|ZP_02683124.1| riboflavin biosynthesis protein RibD [Salmonella enterica subsp.
           enterica serovar Hadar str. RI_05P066]
 gi|205350075|gb|EDZ36706.1| riboflavin biosynthesis protein RibD [Salmonella enterica subsp.
           enterica serovar Hadar str. RI_05P066]
          Length = 367

 Score = 81.1 bits (200), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 36/155 (23%), Positives = 54/155 (34%), Gaps = 21/155 (13%)

Query: 3   KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +   +M+ AL+ AQ      +  P VG V V N  I+    +          HAE+ A+R
Sbjct: 2   QDEFYMARALKLAQRGRFTTHPNPNVGCVIVNNGDIVGEGYHHRAGE----PHAEVHALR 57

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           M               YVTLEPC        C  A+  A + R+     +P       G 
Sbjct: 58  MAGAKAKGAT-----AYVTLEPCSHHGRTPPCCDALIAAGVARVVAAMQDPNPQVAGRGL 112

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
                A       +  G+    +  + + F K  R
Sbjct: 113 YRLQQAG----IAVSHGLMMSEAEALNKGFLKRMR 143


>gi|62179027|ref|YP_215444.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Salmonella enterica subsp. enterica serovar
           Choleraesuis str. SC-B67]
 gi|62126660|gb|AAX64363.1| pyrimidine deaminase/reductase [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. SC-B67]
 gi|322713488|gb|EFZ05059.1| Riboflavin biosynthesis protein ribD [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. A50]
          Length = 367

 Score = 81.1 bits (200), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 36/155 (23%), Positives = 54/155 (34%), Gaps = 21/155 (13%)

Query: 3   KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +   +M+ AL+ AQ      +  P VG V V N  I+    +          HAE+ A+R
Sbjct: 2   QDEFYMARALKLAQRGRFTTHPNPNVGCVIVNNGDIVGEGYHHRAGE----PHAEVHALR 57

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           M               YVTLEPC        C  A+  A + R+     +P       G 
Sbjct: 58  MAGAKAKGAT-----AYVTLEPCSHHGQTPPCCDALIAAGVARVVAAMQDPNPQVAGRGL 112

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
                A       +  G+    +  + + F K  R
Sbjct: 113 YRLQQAG----IAVSHGLMMSEAEALNKGFLKRMR 143


>gi|297196280|ref|ZP_06913678.1| cytidine/deoxycytidylate deaminase [Streptomyces pristinaespiralis
           ATCC 25486]
 gi|297153148|gb|EDY66892.2| cytidine/deoxycytidylate deaminase [Streptomyces pristinaespiralis
           ATCC 25486]
          Length = 140

 Score = 80.7 bits (199), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 24/94 (25%), Positives = 40/94 (42%), Gaps = 1/94 (1%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +   +E A  A    + P G+V V  + ++ +   NR   L D T H E    R     +
Sbjct: 14  LRRCVELAAEAVEAGDEPFGSVLVDGDGRVRAEDRNRETSLADQTQHPEFALARWAAEHM 73

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
           + +      ++ + E C MCAAA     + R+ Y
Sbjct: 74  TAQERRAATVFTSGEHCPMCAAAHGWVGLGRIVY 107


>gi|93279919|pdb|2G84|A Chain A, Cytidine And Deoxycytidylate Deaminase Zinc-Binding Region
           From Nitrosomonas Europaea.
 gi|93279920|pdb|2G84|B Chain B, Cytidine And Deoxycytidylate Deaminase Zinc-Binding Region
           From Nitrosomonas Europaea
          Length = 197

 Score = 80.7 bits (199), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 30/148 (20%), Positives = 52/148 (35%), Gaps = 11/148 (7%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M   LE  +     +  P  A      +  +I+   NR    +   AHAEILA+ +    
Sbjct: 32  MGYVLELVRANIAADGGPFAAAVFERDSGLLIAAGTNRVVPGRCSAAHAEILALSLAQAK 91

Query: 66  LSQEIL-----PEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
           L    L     P  +L  + EPC MC  A+  + +R L   A +     I          
Sbjct: 92  LDTHDLSADGLPACELVTSAEPCVMCFGAVIWSGVRSLVCAARSDDVEAIGFDEGPRPEN 151

Query: 121 TCH----HSPEIYPGISEQRSRQIIQDF 144
                      +  G+    +  +++++
Sbjct: 152 WMGGLEARGITVTTGLLRDAACALLREY 179


>gi|284991868|ref|YP_003410422.1| CMP/dCMP deaminase protein [Geodermatophilus obscurus DSM 43160]
 gi|284065113|gb|ADB76051.1| CMP/dCMP deaminase zinc-binding protein [Geodermatophilus obscurus
           DSM 43160]
          Length = 157

 Score = 80.7 bits (199), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 24/101 (23%), Positives = 39/101 (38%), Gaps = 2/101 (1%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMG 62
               +   +  A+ A    + P G+V V    ++     N      D T H E    R  
Sbjct: 6   DLTHLRRCVALARAALEAGDEPFGSVLVDAEGRVRFEDSNHV-AGGDATRHPEFAIARWA 64

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
            + ++ E      +Y + E C MCAAA     + R+ Y +S
Sbjct: 65  AQHMTPEERAAATVYTSGEHCPMCAAAHGWVGLGRIVYASS 105


>gi|254562342|ref|YP_003069437.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino) uracil
           reductase [Methylobacterium extorquens DM4]
 gi|254269620|emb|CAX25591.1| fused diaminohydroxyphosphoribosylaminopyrimidine deaminase;
           5-amino-6-(5-phosphoribosylamino) uracil reductase
           [Methylobacterium extorquens DM4]
          Length = 376

 Score = 80.7 bits (199), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 34/140 (24%), Positives = 46/140 (32%), Gaps = 21/140 (15%)

Query: 8   MSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M  AL   +    R      VGAV V   +I+ +A            HAE LA+ M    
Sbjct: 19  MRLALALGRRNLGRTWPNPSVGAVVVAEGRIVGQAVTAVGGR----PHAEPLALAMAGEA 74

Query: 66  LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
                     LYVTLEPC        C  A   A I R+     +P       G      
Sbjct: 75  A-----RGATLYVTLEPCSHHGRTPPCTDATIAAGIARVVTAIEDPDPRVAGRGHAGLRA 129

Query: 120 ATCHHSPEIYPGISEQRSRQ 139
           A       +  G+  + + +
Sbjct: 130 AG----ITVETGLLREEAAR 145


>gi|240139918|ref|YP_002964395.1| fused diaminohydroxyphosphoribosylaminopyrimidine
           deaminase;5-amino-6-(5-phosphoribosylamino) uracil
           reductase [Methylobacterium extorquens AM1]
 gi|240009892|gb|ACS41118.1| fused diaminohydroxyphosphoribosylaminopyrimidine
           deaminase;5-amino-6-(5-phosphoribosylamino) uracil
           reductase [Methylobacterium extorquens AM1]
          Length = 376

 Score = 80.7 bits (199), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 34/140 (24%), Positives = 46/140 (32%), Gaps = 21/140 (15%)

Query: 8   MSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M  AL   +    R      VGAV V   +I+ +A            HAE LA+ M    
Sbjct: 19  MRLALALGRRNLGRTWPNPSVGAVVVAEGRIVGQAVTAVGGR----PHAEPLALAMAGEA 74

Query: 66  LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
                     LYVTLEPC        C  A   A I R+     +P       G      
Sbjct: 75  A-----RGATLYVTLEPCSHHGRTPPCTDATIAAGIARVVTAIEDPDPRVAGRGHAGLRA 129

Query: 120 ATCHHSPEIYPGISEQRSRQ 139
           A       +  G+  + + +
Sbjct: 130 AG----ITVETGLLREEAAR 145


>gi|121605806|ref|YP_983135.1| riboflavin biosynthesis protein RibD [Polaromonas naphthalenivorans
           CJ2]
 gi|120594775|gb|ABM38214.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Polaromonas
           naphthalenivorans CJ2]
          Length = 370

 Score = 80.7 bits (199), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 34/152 (22%), Positives = 54/152 (35%), Gaps = 18/152 (11%)

Query: 4   GNVFMSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
               M  A+  A  A       P VG V   +  ++ +     +       HAEI+A+R 
Sbjct: 7   DTEMMPRAVALALAAMRITSPNPRVGCVLTSSGDVLGQGH--TQAAGHP--HAEIMALRD 62

Query: 62  GCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQ 115
                    +     YVTLEPC+       C  A+  A I+++    ++P       G +
Sbjct: 63  AAAQGHS--VVGATAYVTLEPCSHHGRTGPCCDALIAAGIKKIVASIADPNPLVSGQGFE 120

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
               A      E+  G     SR++   FF  
Sbjct: 121 RLRAAG----IEVEVGPGAAESRELNIGFFSR 148


>gi|237803160|ref|YP_002888354.1| Riboflavin biosynthesis protein
           (diaminohydroxyphosphoribosylaminopyrimidine deaminase)
           [Chlamydia trachomatis B/Jali20/OT]
 gi|231274394|emb|CAX11189.1| Riboflavin biosynthesis protein
           (diaminohydroxyphosphoribosylaminopyrimidine deaminase)
           [Chlamydia trachomatis B/Jali20/OT]
          Length = 375

 Score = 80.7 bits (199), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 31/150 (20%), Positives = 59/150 (39%), Gaps = 23/150 (15%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           ++   FM  A+   +   +    P   VG V V N  +I    ++       + HAE+ A
Sbjct: 6   EQQLFFMRKAVALGEKGRIFA-PPNPWVGCVIVKNGCVIGEGWHQGI----GSPHAEVCA 60

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
           ++       +  L   +++VTLEPC        C   +  +++  +Y G  +P     + 
Sbjct: 61  VQ-----DQKCSLEGAEVFVTLEPCCHFGRTPPCVDLLIKSKVAAVYVGLLDPDPRVCKK 115

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQ 142
           G      A       +Y G+  Q ++  +Q
Sbjct: 116 GVARLQAAGIP----VYVGVGSQEAKTSLQ 141


>gi|16763796|ref|NP_459411.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. LT2]
 gi|161615396|ref|YP_001589361.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Salmonella enterica subsp. enterica serovar
           Paratyphi B str. SPB7]
 gi|167992266|ref|ZP_02573364.1| riboflavin biosynthesis protein RibD [Salmonella enterica subsp.
           enterica serovar 4,[5],12:i:- str. CVM23701]
 gi|168240239|ref|ZP_02665171.1| riboflavin biosynthesis protein RibD [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL486]
 gi|194442362|ref|YP_002039658.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Salmonella enterica subsp. enterica serovar
           Newport str. SL254]
 gi|194449088|ref|YP_002044451.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Salmonella enterica subsp. enterica serovar
           Heidelberg str. SL476]
 gi|197264648|ref|ZP_03164722.1| riboflavin biosynthesis protein RibD [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA23]
 gi|224582254|ref|YP_002636052.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Salmonella enterica subsp. enterica serovar
           Paratyphi C strain RKS4594]
 gi|16418920|gb|AAL19370.1| pyrimidine deaminase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. LT2]
 gi|161364760|gb|ABX68528.1| hypothetical protein SPAB_03167 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|194401025|gb|ACF61247.1| riboflavin biosynthesis protein RibD [Salmonella enterica subsp.
           enterica serovar Newport str. SL254]
 gi|194407392|gb|ACF67611.1| riboflavin biosynthesis protein RibD [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL476]
 gi|197242903|gb|EDY25523.1| riboflavin biosynthesis protein RibD [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA23]
 gi|205329484|gb|EDZ16248.1| riboflavin biosynthesis protein RibD [Salmonella enterica subsp.
           enterica serovar 4,[5],12:i:- str. CVM23701]
 gi|205339872|gb|EDZ26636.1| riboflavin biosynthesis protein RibD [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL486]
 gi|224466781|gb|ACN44611.1| riboflavin biosynthesis protein RibD [Salmonella enterica subsp.
           enterica serovar Paratyphi C strain RKS4594]
 gi|261245699|emb|CBG23495.1| riboflavin biosynthesis protein RibD [Salmonella enterica subsp.
           enterica serovar Typhimurium str. D23580]
 gi|267992127|gb|ACY87012.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. 14028S]
 gi|301157027|emb|CBW16510.1| riboflavin biosynthesis protein RibD [Salmonella enterica subsp.
           enterica serovar Typhimurium str. SL1344]
 gi|312911449|dbj|BAJ35423.1| riboflavin biosynthesis protein RibD [Salmonella enterica subsp.
           enterica serovar Typhimurium str. T000240]
 gi|321225143|gb|EFX50204.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase [Salmonella
           enterica subsp. enterica serovar Typhimurium str.
           TN061786]
 gi|323128735|gb|ADX16165.1| Riboflavin biosynthesis protein ribD [Salmonella enterica subsp.
           enterica serovar Typhimurium str. 4/74]
 gi|332987364|gb|AEF06347.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. UK-1]
          Length = 367

 Score = 80.7 bits (199), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 36/155 (23%), Positives = 54/155 (34%), Gaps = 21/155 (13%)

Query: 3   KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +   +M+ AL+ AQ      +  P VG V V N  I+    +          HAE+ A+R
Sbjct: 2   QDEFYMARALKLAQRGRFTTHPNPNVGCVIVNNGDIVGEGYHHRAGE----PHAEVHALR 57

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           M               YVTLEPC        C  A+  A + R+     +P       G 
Sbjct: 58  MAGAKAKGAT-----AYVTLEPCSHHGRTPPCCDALIAAGVARVVAAMQDPNPQVAGRGL 112

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
                A       +  G+    +  + + F K  R
Sbjct: 113 YRLQQAG----IAVSHGLMMSEAEALNKGFLKRMR 143


>gi|168237529|ref|ZP_02662587.1| riboflavin biosynthesis protein RibD [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. SL480]
 gi|194734520|ref|YP_002113449.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. CVM19633]
 gi|194710022|gb|ACF89243.1| riboflavin biosynthesis protein RibD [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. CVM19633]
 gi|197289553|gb|EDY28916.1| riboflavin biosynthesis protein RibD [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. SL480]
          Length = 367

 Score = 80.7 bits (199), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 35/155 (22%), Positives = 54/155 (34%), Gaps = 21/155 (13%)

Query: 3   KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +   +M+ AL+ AQ      +  P VG V V N  I+    +          HAE+ A+R
Sbjct: 2   QDEFYMARALKLAQRGRFTTHPNPNVGCVIVNNGDIVGEGYHHRAGE----PHAEVHALR 57

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           M               YVTLEPC        C  A+  A + R+     +P       G 
Sbjct: 58  MAGAKAKGAT-----AYVTLEPCSHHGRTPPCCDALIAAGVARVVAAMQDPNPQVAGRGL 112

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
                +       +  G+    +  + + F K  R
Sbjct: 113 YRLQQSG----IAVSHGLMMSEAEALNKGFLKRMR 143


>gi|163852584|ref|YP_001640627.1| riboflavin biosynthesis protein RibD [Methylobacterium extorquens
           PA1]
 gi|163664189|gb|ABY31556.1| riboflavin biosynthesis protein RibD [Methylobacterium extorquens
           PA1]
          Length = 371

 Score = 80.7 bits (199), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 34/140 (24%), Positives = 46/140 (32%), Gaps = 21/140 (15%)

Query: 8   MSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M  AL   +    R      VGAV V   +I+ +A            HAE LA+ M    
Sbjct: 14  MRLALALGRRNLGRTWPNPSVGAVVVAEGRIVGQAVTAVGGR----PHAEPLALAMAGEA 69

Query: 66  LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
                     LYVTLEPC        C  A   A I R+     +P       G      
Sbjct: 70  AH-----GATLYVTLEPCSHHGRTPPCTDATIAAGIARVVTAIEDPDPRVAGRGHAGLRA 124

Query: 120 ATCHHSPEIYPGISEQRSRQ 139
           A       +  G+  + + +
Sbjct: 125 AG----ITVETGLLREEAAR 140


>gi|30248078|ref|NP_840148.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Nitrosomonas europaea ATCC 19718]
 gi|30179963|emb|CAD83958.1| Cytidine and deoxycytidylate deaminase zinc-binding region
           [Nitrosomonas europaea ATCC 19718]
          Length = 193

 Score = 80.7 bits (199), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 30/148 (20%), Positives = 52/148 (35%), Gaps = 11/148 (7%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M   LE  +     +  P  A      +  +I+   NR    +   AHAEILA+ +    
Sbjct: 30  MGYVLELVRANIAADGGPFAAAVFERDSGLLIAAGTNRVVPGRCSAAHAEILALSLAQAK 89

Query: 66  LSQEIL-----PEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
           L    L     P  +L  + EPC MC  A+  + +R L   A +     I          
Sbjct: 90  LDTHDLSADGLPACELVTSAEPCVMCFGAVIWSGVRSLVCAARSDDVEAIGFDEGPRPEN 149

Query: 121 TCH----HSPEIYPGISEQRSRQIIQDF 144
                      +  G+    +  +++++
Sbjct: 150 WMGGLEARGITVTTGLLRDAACALLREY 177


>gi|198275609|ref|ZP_03208140.1| hypothetical protein BACPLE_01778 [Bacteroides plebeius DSM 17135]
 gi|198271238|gb|EDY95508.1| hypothetical protein BACPLE_01778 [Bacteroides plebeius DSM 17135]
          Length = 144

 Score = 80.7 bits (199), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 33/110 (30%), Positives = 44/110 (40%), Gaps = 15/110 (13%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRN--------RELKDVTA--- 52
              +M  AL  A+N+  +    VGA+ V +  IIS   N           +   VT    
Sbjct: 12  DKRYMRMALIWAENSYCQR-RQVGALIVKDKMIISDGYNGTPAGFENVCEDENGVTRPYV 70

Query: 53  -HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
            HAE  AI    R  +        +YVT  PC  CA  I  A I+R+ Y 
Sbjct: 71  LHAEANAITKIARSSNSS--EGATMYVTASPCIECAKLIIQAGIKRVVYA 118


>gi|114765495|ref|ZP_01444605.1| riboflavin biosynthesis protein RibD [Pelagibaca bermudensis
           HTCC2601]
 gi|114542205|gb|EAU45236.1| riboflavin biosynthesis protein RibD [Roseovarius sp. HTCC2601]
          Length = 350

 Score = 80.7 bits (199), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 28/131 (21%), Positives = 44/131 (33%), Gaps = 29/131 (22%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKDVTA-----HAEILAIRMGCRILSQEILPEVDLYVTL 80
           VG V V + +++ R           TA     HAE  A+                 YVTL
Sbjct: 10  VGCVIVKDGRVVGRG---------ATAPGGRPHAEPQALAQAGEAA-----RGATAYVTL 55

Query: 81  EPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISE 134
           EPC        CA A+  + + R+    ++        G          H  E+  G+  
Sbjct: 56  EPCSHHGKTPPCAEALVKSGVARVVAPLADNDARVSGQGFAHLRK----HGIEVTTGVLA 111

Query: 135 QRSRQIIQDFF 145
           + + +    FF
Sbjct: 112 EDAARDHAGFF 122


>gi|297748861|gb|ADI51407.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase [Chlamydia
           trachomatis D-EC]
 gi|297749741|gb|ADI52419.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase [Chlamydia
           trachomatis D-LC]
          Length = 400

 Score = 80.7 bits (199), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 31/150 (20%), Positives = 59/150 (39%), Gaps = 23/150 (15%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           ++   FM  A+   +   +    P   VG V V N  +I    ++       + HAE+ A
Sbjct: 31  EQQLFFMRKAVALGEKGRIFA-PPNPWVGCVIVKNGCVIGEGWHQGI----GSPHAEVCA 85

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
           ++       +  L   +++VTLEPC        C   +  +++  +Y G  +P     + 
Sbjct: 86  VQ-----DQKCSLEGAEVFVTLEPCCHFGRTPPCVDLLIKSKVAAVYVGLLDPDPRVCKK 140

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQ 142
           G      A       +Y G+  Q ++  +Q
Sbjct: 141 GVARLQAAGIP----VYVGVGSQEAKTSLQ 166


>gi|108799736|ref|YP_639933.1| CMP/dCMP deaminase, zinc-binding protein [Mycobacterium sp. MCS]
 gi|119868846|ref|YP_938798.1| CMP/dCMP deaminase, zinc-binding [Mycobacterium sp. KMS]
 gi|126435377|ref|YP_001071068.1| CMP/dCMP deaminase, zinc-binding [Mycobacterium sp. JLS]
 gi|108770155|gb|ABG08877.1| CMP/dCMP deaminase, zinc-binding protein [Mycobacterium sp. MCS]
 gi|119694935|gb|ABL92008.1| CMP/dCMP deaminase, zinc-binding protein [Mycobacterium sp. KMS]
 gi|126235177|gb|ABN98577.1| CMP/dCMP deaminase, zinc-binding protein [Mycobacterium sp. JLS]
          Length = 159

 Score = 80.7 bits (199), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 24/103 (23%), Positives = 39/103 (37%), Gaps = 2/103 (1%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIR 60
                 +   ++ A+ A    + P G++ V +  ++     NR     D T H E    R
Sbjct: 5   DSDLEHLRRCVDLAREALDAGDEPFGSLLVDSAGQVRFADHNRV-SGGDHTRHPEFAIAR 63

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
                L         +Y + E C MCAAA +   + R+ Y  S
Sbjct: 64  WAAEHLDPSERAAATVYTSGEHCPMCAAAHAWVGLGRIVYATS 106


>gi|218531424|ref|YP_002422240.1| riboflavin biosynthesis protein RibD [Methylobacterium
           chloromethanicum CM4]
 gi|218523727|gb|ACK84312.1| riboflavin biosynthesis protein RibD [Methylobacterium
           chloromethanicum CM4]
          Length = 376

 Score = 80.7 bits (199), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 34/140 (24%), Positives = 46/140 (32%), Gaps = 21/140 (15%)

Query: 8   MSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M  AL   +    R      VGAV V   +I+ +A            HAE LA+ M    
Sbjct: 19  MRLALALGRRNLGRTWPNPSVGAVVVAEGRIVGQAVTAVGGR----PHAEPLALAMAGEA 74

Query: 66  LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
                     LYVTLEPC        C  A   A I R+     +P       G      
Sbjct: 75  A-----RGATLYVTLEPCSHHGRTPPCTDATIAAGIARVVTAIEDPDPRVAGRGHAGLRA 129

Query: 120 ATCHHSPEIYPGISEQRSRQ 139
           A       +  G+  + + +
Sbjct: 130 AG----ITVETGLLREEAAR 145


>gi|15605463|ref|NP_220249.1| riboflavin deaminase [Chlamydia trachomatis D/UW-3/CX]
 gi|237805081|ref|YP_002889235.1| Riboflavin biosynthesis protein
           (diaminohydroxyphosphoribosylaminopyrimidine deaminase)
           [Chlamydia trachomatis B/TZ1A828/OT]
 gi|255311561|ref|ZP_05354131.1| Riboflavin biosynthesis protein
           (diaminohydroxyphosphoribosylaminopyrimidine deaminase)
           [Chlamydia trachomatis 6276]
 gi|255317862|ref|ZP_05359108.1| Riboflavin biosynthesis protein
           (diaminohydroxyphosphoribosylaminopyrimidine deaminase)
           [Chlamydia trachomatis 6276s]
 gi|13633735|sp|O84735|RIBD_CHLTR RecName: Full=Riboflavin biosynthesis protein RibD; Includes:
           RecName:
           Full=Diaminohydroxyphosphoribosylaminopyrimidine
           deaminase; Short=DRAP deaminase; AltName:
           Full=Riboflavin-specific deaminase; Includes: RecName:
           Full=5-amino-6-(5-phosphoribosylamino)uracil reductase;
           AltName: Full=HTP reductase
 gi|3329187|gb|AAC68325.1| Riboflavin Deaminase [Chlamydia trachomatis D/UW-3/CX]
 gi|231273381|emb|CAX10296.1| Riboflavin biosynthesis protein
           (diaminohydroxyphosphoribosylaminopyrimidine deaminase)
           [Chlamydia trachomatis B/TZ1A828/OT]
 gi|296436276|gb|ADH18450.1| Riboflavin biosynthesis protein
           (diaminohydroxyphosphoribosylaminopyrimidine deaminase)
           [Chlamydia trachomatis G/9768]
 gi|296437205|gb|ADH19375.1| Riboflavin biosynthesis protein
           (diaminohydroxyphosphoribosylaminopyrimidine deaminase)
           [Chlamydia trachomatis G/11222]
 gi|296438136|gb|ADH20297.1| Riboflavin biosynthesis protein
           (diaminohydroxyphosphoribosylaminopyrimidine deaminase)
           [Chlamydia trachomatis G/11074]
 gi|297140637|gb|ADH97395.1| Riboflavin biosynthesis protein
           (diaminohydroxyphosphoribosylaminopyrimidine deaminase)
           [Chlamydia trachomatis G/9301]
          Length = 375

 Score = 80.7 bits (199), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 31/150 (20%), Positives = 59/150 (39%), Gaps = 23/150 (15%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           ++   FM  A+   +   +    P   VG V V N  +I    ++       + HAE+ A
Sbjct: 6   EQQLFFMRKAVALGEKGRIFA-PPNPWVGCVIVKNGCVIGEGWHQGI----GSPHAEVCA 60

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
           ++       +  L   +++VTLEPC        C   +  +++  +Y G  +P     + 
Sbjct: 61  VQ-----DQKCSLEGAEVFVTLEPCCHFGRTPPCVDLLIKSKVAAVYVGLLDPDPRVCKK 115

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQ 142
           G      A       +Y G+  Q ++  +Q
Sbjct: 116 GVARLQAAGIP----VYVGVGSQEAKTSLQ 141


>gi|218506245|ref|ZP_03504123.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase protein
           [Rhizobium etli Brasil 5]
          Length = 137

 Score = 80.7 bits (199), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 29/142 (20%), Positives = 46/142 (32%), Gaps = 21/142 (14%)

Query: 3   KGNVFMSCALEEAQN--AALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
               FM+ A+  ++           VG + V +  I+ +A            HAE  A+ 
Sbjct: 6   DDEGFMAAAIRLSRRHLGRTATNPSVGCLIVRDGVIVGQA----VTAIGGRPHAEPQALA 61

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
              ++           YVTLEPC        CA A+    + R+    ++P       G 
Sbjct: 62  EAGQLA-----RGATAYVTLEPCSHHGKTPPCAEALIAYGVARVVISVTDPDPRVSGRGI 116

Query: 115 QFYTLATCHHSPEIYPGISEQR 136
                A      E+  G  E  
Sbjct: 117 TMLRDAG----IEVDTGALEAE 134


>gi|152990173|ref|YP_001355895.1| riboflavin biosynthesis protein RibG [Nitratiruptor sp. SB155-2]
 gi|151422034|dbj|BAF69538.1| riboflavin biosynthesis protein RibG [Nitratiruptor sp. SB155-2]
          Length = 333

 Score = 80.7 bits (199), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 44/175 (25%), Positives = 67/175 (38%), Gaps = 39/175 (22%)

Query: 4   GNVFMSCALEEAQN--AALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
            N FM  AL+EA            VGAV  +NN IIS+  +     K    HAE+ AI+ 
Sbjct: 5   DNFFMDIALQEAWRYQGLTYPNPAVGAVVAINNCIISKGAH----TKAGAPHAEVEAIKN 60

Query: 62  GCRIL----------------------SQEILPEVDLYVTLEPC------TMCAAAISLA 93
               L                      ++++     +YVTLEPC        C+  I   
Sbjct: 61  AYYTLTGDEHVLHLQDALELHEYLVANAKDLFHNATIYVTLEPCNHFGKTPPCSLLIKKL 120

Query: 94  RIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKER 148
             +R+     +P       G  F      +   E+  GI E+R++ +I+ F + R
Sbjct: 121 GFQRVVIALKDPNEEAAG-GASFLR----NCGIEVDIGIQEERAKVLIEPFLQWR 170


>gi|256159495|ref|ZP_05457263.1| riboflavin biosynthesis protein RibD [Brucella ceti M490/95/1]
 gi|256254781|ref|ZP_05460317.1| riboflavin biosynthesis protein RibD [Brucella ceti B1/94]
 gi|261221961|ref|ZP_05936242.1| riboflavin biosynthesis protein RibD [Brucella ceti B1/94]
 gi|265997924|ref|ZP_06110481.1| riboflavin biosynthesis protein RibD [Brucella ceti M490/95/1]
 gi|260920545|gb|EEX87198.1| riboflavin biosynthesis protein RibD [Brucella ceti B1/94]
 gi|262552392|gb|EEZ08382.1| riboflavin biosynthesis protein RibD [Brucella ceti M490/95/1]
          Length = 373

 Score = 80.3 bits (198), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 31/145 (21%), Positives = 47/145 (32%), Gaps = 21/145 (14%)

Query: 3   KGNVFMSCALEEAQ--NAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
               FM   +  A+           VG + V +  I+ R             HAE  A+ 
Sbjct: 14  NDLRFMEATIRYARRHKGLTGTNPSVGTIIVKDGVIVGRG----VTALGGRPHAEPQALA 69

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
                           YVTLEPC        CA A+  + + R+   A++P       G 
Sbjct: 70  EVGEAA-----RGATAYVTLEPCAHHGRTPPCAEALVRSGVARVVVAATDPDERVSRKGF 124

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQ 139
                A      E+ PGI  +++  
Sbjct: 125 AILREAG----IEVVPGILSEQAAD 145


>gi|228469568|ref|ZP_04054561.1| riboflavin biosynthesis protein RibD [Porphyromonas uenonis 60-3]
 gi|228308918|gb|EEK17593.1| riboflavin biosynthesis protein RibD [Porphyromonas uenonis 60-3]
          Length = 338

 Score = 80.3 bits (198), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 37/151 (24%), Positives = 56/151 (37%), Gaps = 21/151 (13%)

Query: 4   GNVFMSCALEEAQNAALRN----EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
             ++M   L+ A  A  +        VG+V V  +KII    +          HAE++A 
Sbjct: 10  DEIYMQRCLQLA--ALAQGRTSPNPMVGSVIVYKDKIIGEGYHHYAGA----PHAEVMAW 63

Query: 60  RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113
           R     L   ++ E   YV+LEPC        CA  I+  R  R+     +P       G
Sbjct: 64  RSVPEELRG-LVGEATWYVSLEPCAHYGKTPPCAELIAGLRPARVVVAMLDPFAKVDGRG 122

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
                 A      E+  G  EQ +  + + F
Sbjct: 123 VARLREAG----IEVSIGCLEQAAIALNRHF 149


>gi|257067270|ref|YP_003153525.1| cytosine/adenosine deaminase [Brachybacterium faecium DSM 4810]
 gi|256558088|gb|ACU83935.1| cytosine/adenosine deaminase [Brachybacterium faecium DSM 4810]
          Length = 163

 Score = 80.3 bits (198), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 24/102 (23%), Positives = 41/102 (40%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           +     +   ++ A+ A    + P G++ V  +     A     +  D T H E    R 
Sbjct: 9   ETDRRHLRRCVDLAREALDAGDEPFGSLLVDADGTERFADRNRVQGGDHTRHPEFEIARW 68

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
               LS +      +Y + E C MCAAA +   + R+ Y +S
Sbjct: 69  AANHLSPQERARATVYTSGEHCPMCAAAHAWVGLGRIVYASS 110


>gi|114705235|ref|ZP_01438143.1| hypothetical protein FP2506_09861 [Fulvimarina pelagi HTCC2506]
 gi|114540020|gb|EAU43140.1| hypothetical protein FP2506_09861 [Fulvimarina pelagi HTCC2506]
          Length = 164

 Score = 80.3 bits (198), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 28/101 (27%), Positives = 42/101 (41%), Gaps = 2/101 (1%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMG 62
             V ++  +E A+ A      P G+  V  N  ++    NR     D TAH E    R  
Sbjct: 12  DRVHLARCVELARQAVEEGHKPFGSRLVAGNGTVLKEDYNRT-GDGDPTAHPEFALARWA 70

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
              +      E  +Y + E C MCA A  +  + R+ YG+S
Sbjct: 71  GLNMEPSERAEATVYTSGEHCPMCATAHGIVGLGRIVYGSS 111


>gi|66812330|ref|XP_640344.1| hypothetical protein DDB_G0282171 [Dictyostelium discoideum AX4]
 gi|60468358|gb|EAL66365.1| hypothetical protein DDB_G0282171 [Dictyostelium discoideum AX4]
          Length = 227

 Score = 80.3 bits (198), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 27/142 (19%), Positives = 46/142 (32%), Gaps = 15/142 (10%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMG 62
               M  A++    A  +     GA     N  ++    N          H EI AI   
Sbjct: 54  HETNMRVAIDV-TKAINQK---FGAAIFHSNGTLMCTGVNT--GQTSAILHGEIRAILNC 107

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA-- 120
             +  +       LY T EPC MC+AAI  A+  ++ + +            Q    A  
Sbjct: 108 SELYGKTTWEGYYLYTTGEPCPMCSAAIMWAKFDKVIFASYVSNMYCERCFNQLPMDAVE 167

Query: 121 ------TCHHSPEIYPGISEQR 136
                   + +  +  G+ ++ 
Sbjct: 168 IFKLGYGINKNTVVIGGVLQEE 189


>gi|319784162|ref|YP_004143638.1| riboflavin biosynthesis protein RibD [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
 gi|317170050|gb|ADV13588.1| riboflavin biosynthesis protein RibD [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
          Length = 371

 Score = 80.3 bits (198), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 32/150 (21%), Positives = 50/150 (33%), Gaps = 25/150 (16%)

Query: 4   GNVFMSCALEEAQN-AALRNEIP-VGAVAVLNNK----IISRAGNRNRELKDVTAHAEIL 57
              FM+ AL  ++  A      P VG + V ++     I+               HAE  
Sbjct: 10  DRRFMAAALRLSRKNAGRTATNPSVGTLIVRDDGNGPMIVGTGVTAVGGR----PHAETE 65

Query: 58  AIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIE 111
           A+     +           YVTLEPC        CA A+  A + R+   AS+P      
Sbjct: 66  ALAEAGDLA-----RGATAYVTLEPCAHHGRTPPCANALVNAGVARVVGAASDPDSRVSG 120

Query: 112 NGTQFYTLATCHHSPEIYPGISEQRSRQII 141
            G      A      E+   +    + + +
Sbjct: 121 KGYAILRAAG----VEVVEKVLAAEAAEQM 146


>gi|317124749|ref|YP_004098861.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase;
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Intrasporangium calvum DSM 43043]
 gi|315588837|gb|ADU48134.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase;
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Intrasporangium calvum DSM 43043]
          Length = 378

 Score = 80.3 bits (198), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 30/141 (21%), Positives = 51/141 (36%), Gaps = 22/141 (15%)

Query: 8   MSCALEEAQNAALRNEIP-VGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M  A+  A+ +   +  P VG V V    ++++   +R       T HA           
Sbjct: 17  MLRAIALAERSPWPDPNPRVGCVIVDRAGEVVAEGWHR----GAGTPHA-----EAAALA 67

Query: 66  LSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
           L+ E       YV+LEPC        C+ A+  A + R+ Y  ++P       G      
Sbjct: 68  LAGERARGGTAYVSLEPCAHRGRTGPCSDALVEAGVARVVYAQADPNAEASG-GADVLRA 126

Query: 120 ATCHHSPEIYPGISEQRSRQI 140
           A      +I  G+    +  +
Sbjct: 127 AG----VQIVGGLLADEAAAL 143


>gi|54297135|ref|YP_123504.1| riboflavin biosynthesis protein RibD [Legionella pneumophila str.
           Paris]
 gi|53750920|emb|CAH12331.1| Riboflavin biosynthesis protein RibD [Legionella pneumophila str.
           Paris]
          Length = 357

 Score = 80.3 bits (198), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 36/111 (32%), Positives = 47/111 (42%), Gaps = 17/111 (15%)

Query: 4   GNVFMSCALEEAQ--NAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
              F+  ALE+A+           VGAVAV N  II++A +R       T HAE L +  
Sbjct: 2   HEQFLLAALEQAKLGRGFCAPNPSVGAVAVQNGNIIAQAWHR----GAGTPHAEQLLLSQ 57

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPK 106
                     P V LYVTLEPC        C  AI    I+ + +   +P 
Sbjct: 58  -----IPPQTPGVTLYVTLEPCNHWGKTPPCVDAIINHGIQEVVFSYFDPN 103


>gi|171059615|ref|YP_001791964.1| riboflavin biosynthesis protein RibD [Leptothrix cholodnii SP-6]
 gi|170777060|gb|ACB35199.1| riboflavin biosynthesis protein RibD [Leptothrix cholodnii SP-6]
          Length = 416

 Score = 80.3 bits (198), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 29/129 (22%), Positives = 47/129 (36%), Gaps = 17/129 (13%)

Query: 26  VGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC- 83
           VG V V    +++     +         HAE++A+R          L     YVTLEPC 
Sbjct: 49  VGCVIVDAQGRLLGSGHTQQAGG----PHAEVMAMRTARAAGHS--LIGATAYVTLEPCA 102

Query: 84  -----TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSR 138
                  CA A+  A ++R+    ++P       G      A      ++  G+  + + 
Sbjct: 103 HHGRTPPCADALIEAGLKRVVAAITDPFPLVAGQGLARLAAAG----IQVEQGLMAEAAT 158

Query: 139 QIIQDFFKE 147
            I   FF  
Sbjct: 159 AINIGFFSR 167


>gi|148358764|ref|YP_001249971.1| riboflavin biosynthesis protein RibD [Legionella pneumophila str.
           Corby]
 gi|296106809|ref|YP_003618509.1| riboflavin biosynthesis protein [Legionella pneumophila 2300/99
           Alcoy]
 gi|148280537|gb|ABQ54625.1| riboflavin biosynthesis protein RibD [Legionella pneumophila str.
           Corby]
 gi|295648710|gb|ADG24557.1| riboflavin biosynthesis protein [Legionella pneumophila 2300/99
           Alcoy]
          Length = 357

 Score = 80.3 bits (198), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 36/111 (32%), Positives = 47/111 (42%), Gaps = 17/111 (15%)

Query: 4   GNVFMSCALEEAQ--NAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
              F+  ALE+A+           VGAVAV N  II++A +R       T HAE L +  
Sbjct: 2   HEQFLLAALEQAKLGRGFCAPNPSVGAVAVQNGNIIAQAWHR----GAGTPHAEQLLLSQ 57

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPK 106
                     PEV LY+TLEPC        C  AI    I  + +   +P 
Sbjct: 58  -----IPPQTPEVTLYITLEPCNHWGKTPPCVDAIINHGIEEVVFAYFDPN 103


>gi|126733197|ref|ZP_01748944.1| riboflavin biosynthesis protein RibD [Roseobacter sp. CCS2]
 gi|126716063|gb|EBA12927.1| riboflavin biosynthesis protein RibD [Roseobacter sp. CCS2]
          Length = 369

 Score = 80.3 bits (198), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 31/146 (21%), Positives = 50/146 (34%), Gaps = 21/146 (14%)

Query: 2   KKGNVFMSCALEEAQNAALR--NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
           +    FM+ AL   +    R      VG V V +  I+ R             HAE +A+
Sbjct: 4   QADARFMALALMLGRRGMGRVWPNPAVGCVIVNDCNIVGRGW----TADGGRPHAEAIAL 59

Query: 60  RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113
                           +YVTLEPC        C+ A+  A + R+   A +P       G
Sbjct: 60  AQAGSAA-----DGATVYVTLEPCAHHGKTPPCSNALIKANVARVVIAADDPDERVNGRG 114

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQ 139
                 A      ++  G+  + + +
Sbjct: 115 IAMLRDAG----VQVDCGVGNKAAAR 136


>gi|282881525|ref|ZP_06290195.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Prevotella timonensis CRIS 5C-B1]
 gi|281304636|gb|EFA96726.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Prevotella timonensis CRIS 5C-B1]
          Length = 140

 Score = 80.3 bits (198), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 33/110 (30%), Positives = 47/110 (42%), Gaps = 15/110 (13%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGN--------RNRELKDVTA--- 52
              ++  A   A+N+  +    VGA+ V + +IIS   N        +  + + VT    
Sbjct: 11  DQRYLRMARIWAENSYCQR-RQVGALVVKDQRIISDGYNGTPSGFENQCEDEQGVTHPYV 69

Query: 53  -HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
            HAE  AI    R  +        LYVT  PC  CA  I  A I+R+ YG
Sbjct: 70  LHAEANAITKLARSSNNSD--GATLYVTASPCIECAKLIIQAGIKRVVYG 117


>gi|229494376|ref|ZP_04388139.1| cytidine/deoxycytidylate deaminase, zinc-binding region
           [Rhodococcus erythropolis SK121]
 gi|229318738|gb|EEN84596.1| cytidine/deoxycytidylate deaminase, zinc-binding region
           [Rhodococcus erythropolis SK121]
          Length = 159

 Score = 80.3 bits (198), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 24/102 (23%), Positives = 43/102 (42%), Gaps = 2/102 (1%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +   +E A  A    + P G+V    +   ++   NR     D T H E    R   + L
Sbjct: 9   LRRCVELATEALDAGDEPFGSVLAAADGTFLAEDRNR-IAGGDNTRHPEFELARWAAQYL 67

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGG 108
           + +      ++ + E C MC+AA +   + R+ Y  S+ + G
Sbjct: 68  TPDERSTATVFTSGEHCAMCSAAHAWVGLGRIVYICSSAQLG 109


>gi|302534476|ref|ZP_07286818.1| predicted protein [Streptomyces sp. C]
 gi|302443371|gb|EFL15187.1| predicted protein [Streptomyces sp. C]
          Length = 225

 Score = 80.3 bits (198), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 30/115 (26%), Positives = 41/115 (35%), Gaps = 15/115 (13%)

Query: 9   SCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNREL-----------KDVTAHAEI 56
              LE A  A     + VGAV       +++R  N   E                AHAE+
Sbjct: 21  RRVLELAYEALAAGGLAVGAVLTDPAGVVLARGRNEAYESPGEGTGTGPLRGTPLAHAEM 80

Query: 57  LAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIE 111
            A+       +   L    L+ T EPC MCAAA     +  + Y A +P      
Sbjct: 81  NAL---GAARTGWDLGSATLWSTQEPCAMCAAAAGFTGVGAVRYLAPDPWALADG 132


>gi|54294122|ref|YP_126537.1| riboflavin biosynthesis protein RibD [Legionella pneumophila str.
           Lens]
 gi|53753954|emb|CAH15425.1| Riboflavin biosynthesis protein RibD [Legionella pneumophila str.
           Lens]
          Length = 357

 Score = 80.0 bits (197), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 39/111 (35%), Positives = 50/111 (45%), Gaps = 17/111 (15%)

Query: 4   GNVFMSCALEEAQ--NAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
              F+  ALE+A+           VGAVAV N  II++A +R       T HAE L +  
Sbjct: 2   HEQFLLAALEQAKLGRGFCAPNPSVGAVAVQNGNIIAQAWHR----GAGTPHAEQLLL-- 55

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPK 106
             +IL Q   P V LYVTLEPC        C  AI    I  + +   +P 
Sbjct: 56  -SQILPQT--PGVTLYVTLEPCNHWGKTPPCVDAIINHGIEEVVFSYFDPN 103


>gi|78185053|ref|YP_377488.1| riboflavin biosynthesis protein RibD [Synechococcus sp. CC9902]
 gi|78169347|gb|ABB26444.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Synechococcus sp. CC9902]
          Length = 349

 Score = 80.0 bits (197), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 28/131 (21%), Positives = 43/131 (32%), Gaps = 20/131 (15%)

Query: 26  VGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC- 83
           VGAV +     ++    +          HAE+ A+         +      L VTLEPC 
Sbjct: 21  VGAVVLDQHGCLVGEGFHARAGE----PHAEVGALAQAG-----DRAKGGTLVVTLEPCC 71

Query: 84  -----TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSR 138
                  CA A+  A I R+     +P       G      A      E+  G+ +  + 
Sbjct: 72  HHGLTPPCADAVLKAGIHRVVIALEDPDPRVAGGGIARLRSAGL----EVMSGVLQAEAV 127

Query: 139 QIIQDFFKERR 149
              + F    R
Sbjct: 128 FQNRAFLHRVR 138


>gi|291334222|gb|ADD93888.1| predicted diaminohydroxyphosphoribosylaminopyrimidine deaminase
           [uncultured marine bacterium MedDCM-OCT-S08-C1463]
          Length = 348

 Score = 80.0 bits (197), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 37/155 (23%), Positives = 57/155 (36%), Gaps = 26/155 (16%)

Query: 3   KGNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
             + F+S A+          +  + VG V V  N+II R            +HAEI AI 
Sbjct: 2   SDSFFISEAISLGLKGRFTAKPGVKVGCVIVKENRIIGRGFYEKYGG----SHAEINAIN 57

Query: 61  MGCRILSQEI---LPEVDLYVTLEPCT------MCAAAISLARIRRLYYGASNPKGGGIE 111
                  +     L   DL+VTLEPC+       C   +     +R+  G  +P   GI 
Sbjct: 58  DVKEKYKKNYLSKLSGSDLFVTLEPCSKKGKTGACVNELKKYDFKRIVVGTKDPTQNGIN 117

Query: 112 NGTQF-YTLATCHHSPEIYPGISEQRSRQIIQDFF 145
           N     Y L   ++           + + + + FF
Sbjct: 118 NLQSAGYELKNLNNQ----------QCQALNESFF 142


>gi|310800736|gb|EFQ35629.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Glomerella graminicola M1.001]
          Length = 169

 Score = 80.0 bits (197), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 38/150 (25%), Positives = 58/150 (38%), Gaps = 18/150 (12%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRE------LKDVTAHAEI 56
               +   +E A+ A    + P G+V V  N  II    NR          +D T H E 
Sbjct: 6   DPKILRRCIELAKEALDAGDDPFGSVLVGANGSIIREDRNRVNTGESGDGRRDGTLHPEF 65

Query: 57  LAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNP------KGGGI 110
                    LS E   +  +Y + E C MCAAA +   +  + + +S+       K  G+
Sbjct: 66  TLAHWAQLNLSAEERAKASVYTSGEHCPMCAAAHAWVGLGPIVFVSSSAQFSAWLKEFGV 125

Query: 111 ENGTQFYTLATCHHSPEI-----YPGISEQ 135
           E G +   L     +P I      PG+ E+
Sbjct: 126 ERGAKVKPLPINEVAPNIPFQGPIPGLDEE 155


>gi|224023823|ref|ZP_03642189.1| hypothetical protein BACCOPRO_00539 [Bacteroides coprophilus DSM
           18228]
 gi|224017045|gb|EEF75057.1| hypothetical protein BACCOPRO_00539 [Bacteroides coprophilus DSM
           18228]
          Length = 146

 Score = 80.0 bits (197), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 34/110 (30%), Positives = 44/110 (40%), Gaps = 15/110 (13%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRN--------RELKDVT---- 51
              +M  A+  A+N+       VGA+ V N  IIS   N           +   +T    
Sbjct: 13  DKRYMRMAMIWAENSYCNRRK-VGALIVKNKMIISDGYNGTPAGFENVCEDEHGITIPYV 71

Query: 52  AHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
            HAE  AI    R  +        LYVT  PC  CA  I  A I+R+ YG
Sbjct: 72  LHAEANAITKIARSNNSS--EGATLYVTASPCIECAKLIIQAGIKRVVYG 119


>gi|52841411|ref|YP_095210.1| riboflavin biosynthesis protein RibD [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
 gi|52628522|gb|AAU27263.1| riboflavin biosynthesis protein RibD [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
          Length = 357

 Score = 80.0 bits (197), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 36/111 (32%), Positives = 46/111 (41%), Gaps = 17/111 (15%)

Query: 4   GNVFMSCALEEAQ--NAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
              F+  ALE+A+           VGAVAV N  II++A +R       T HAE L +  
Sbjct: 2   HEQFLLAALEQAKLGRGFCAPNPSVGAVAVQNGNIIAQAWHR----GAGTPHAEQLLLSQ 57

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPK 106
                     P V LYVTLEPC        C  AI    I  + +   +P 
Sbjct: 58  -----IPPQTPGVTLYVTLEPCNHWGKTPPCVDAIINHGIEEVVFSYFDPN 103


>gi|49475527|ref|YP_033568.1| riboflavin biosynthesis protein ribD [Bartonella henselae str.
           Houston-1]
 gi|49238333|emb|CAF27557.1| Riboflavin biosynthesis protein ribD [Bartonella henselae str.
           Houston-1]
          Length = 365

 Score = 80.0 bits (197), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 29/143 (20%), Positives = 50/143 (34%), Gaps = 26/143 (18%)

Query: 8   MSCALEEAQN-AALRNEIP-VGAVAVLNNK-----IISRAGNRNRELKDVTAHAEILAIR 60
           M+ A+  A+    L  E P VG +   N++     I+               HAE+ A++
Sbjct: 1   MAAAIRLAERHVGLTGENPSVGTIIARNDENVGVYIVGYG----VTAIQGRPHAEVQALQ 56

Query: 61  MGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGT 114
           M   +           YVTLEPC+       C   +  + I R+    ++        G 
Sbjct: 57  MAGSLAH-----GATAYVTLEPCSHYGKTSPCVNTLLKSGISRVVIALTDLDKRVNGRGI 111

Query: 115 QFYTLATCHHSPEIYPGISEQRS 137
                A      E+  G+  + +
Sbjct: 112 ALLRAAG----IEVIEGVLAKEA 130


>gi|320354782|ref|YP_004196121.1| CMP/dCMP deaminase zinc-binding protein [Desulfobulbus propionicus
           DSM 2032]
 gi|320123284|gb|ADW18830.1| CMP/dCMP deaminase zinc-binding protein [Desulfobulbus propionicus
           DSM 2032]
          Length = 197

 Score = 80.0 bits (197), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 37/153 (24%), Positives = 60/153 (39%), Gaps = 19/153 (12%)

Query: 8   MSCALEEAQNAAL-RNEIPVGA-VAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           M+  L  A+     ++  P  A V   +  K+I    NR   L   +AHAEI A+ +  +
Sbjct: 34  MAAVLRFARLNTEHQSGGPFSAGVFERDSGKLIVIGVNRVIPLNCSSAHAEITALTLAQQ 93

Query: 65  ILSQEILPE-----VDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
           +L    L         L V   PC MC  A+  + IR L    ++P+   I   T F   
Sbjct: 94  MLGVYDLGGPGLPAHQLVVNWSPCAMCFGAVLWSGIRSLVIAGADPEMMAI---TGFDEG 150

Query: 120 ATCHH--------SPEIYPGISEQRSRQIIQDF 144
               H          E+  G+  + + +  ++F
Sbjct: 151 PMPEHWRRELADRGIELIEGVMREEALKGFREF 183


>gi|227509437|ref|ZP_03939486.1| competence protein ComEB [Lactobacillus brevis subsp. gravesensis
           ATCC 27305]
 gi|227191149|gb|EEI71216.1| competence protein ComEB [Lactobacillus brevis subsp. gravesensis
           ATCC 27305]
          Length = 163

 Score = 80.0 bits (197), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 30/115 (26%), Positives = 45/115 (39%), Gaps = 18/115 (15%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKD----------- 49
           +K    FM  A+  A  +     + VGAV V + +II+   N +    D           
Sbjct: 10  IKWDQYFMMQAVLLASRSTCER-LSVGAVIVRDKRIIAGGYNGSVAGDDHCIDVGCYLVD 68

Query: 50  ----VTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
                T HAE+ AI    +          ++YVT  PC  C   +  A I+R+ Y
Sbjct: 69  GHCVRTIHAEMNAILQCAKFGESTD--NAEIYVTDFPCLQCTKMLLQAGIKRINY 121


>gi|307328879|ref|ZP_07608049.1| riboflavin biosynthesis protein RibD [Streptomyces violaceusniger
           Tu 4113]
 gi|306885544|gb|EFN16560.1| riboflavin biosynthesis protein RibD [Streptomyces violaceusniger
           Tu 4113]
          Length = 297

 Score = 80.0 bits (197), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 31/145 (21%), Positives = 51/145 (35%), Gaps = 27/145 (18%)

Query: 8   MSCALEEAQNAALRN----EIPVGAVAVLNNKI-ISRAGNRNRELKDVTAHAEILAIRMG 62
           M  A+  A +A          PVG V +  + + +    +  +       HAE+ A+   
Sbjct: 10  MRRAI--AISAQGLGTTSPNPPVGCVILDRDGVPVGEGYHLRKGDH----HAEVNALTAA 63

Query: 63  CRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116
                 E        VTLEPC        C  A+  A++ R+     +P   G   G   
Sbjct: 64  G-----ERAEGGTAVVTLEPCNHHGRTPPCRQALIDAKVSRVLMAVMDPTSRGEG-GAAV 117

Query: 117 YTLATCHHSPEIYPGISEQRSRQII 141
              A      E+  G+ EQ +  ++
Sbjct: 118 LEQAG----IEVERGVLEQEALLVL 138


>gi|254474397|ref|ZP_05087783.1| riboflavin biosynthesis protein RibD [Ruegeria sp. R11]
 gi|214028640|gb|EEB69475.1| riboflavin biosynthesis protein RibD [Ruegeria sp. R11]
          Length = 358

 Score = 80.0 bits (197), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 31/146 (21%), Positives = 49/146 (33%), Gaps = 21/146 (14%)

Query: 8   MSCALEEAQNAALR--NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           MS AL   +    +      VG V V + +I+ R   +         HAE          
Sbjct: 1   MSLALSLGRRGQGQCWPNPAVGCVIVKDGRIVGRGWTQPGGR----PHAEPE-----ALA 51

Query: 66  LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
            +  +      YV+LEPC        CA A+  A ++R+     +       +G      
Sbjct: 52  RAGALARGATAYVSLEPCAHFGKTPPCAQALIDAGVKRVVAAIEDSDPRVSGHGFAMLRD 111

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFF 145
           A      E+  GI    + +    FF
Sbjct: 112 AG----IEVTTGICADEAARDHAGFF 133


>gi|34496745|ref|NP_900960.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase
           [Chromobacterium violaceum ATCC 12472]
 gi|34102600|gb|AAQ58965.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase
           [Chromobacterium violaceum ATCC 12472]
          Length = 368

 Score = 80.0 bits (197), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 34/150 (22%), Positives = 53/150 (35%), Gaps = 18/150 (12%)

Query: 3   KGNVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
              ++M  AL  A+ A  R      VG V V + +++         L   + HAE+ AI+
Sbjct: 7   DDYLYMQRALRLAEGATRRAAPNPGVGCVLVNHGRVVGEGA----TLALGSDHAEVQAIK 62

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
                           YVTLEPC        CA  +    + R+     +P       G 
Sbjct: 63  DCLARGESPR--GATAYVTLEPCSHHGRTPPCAERLVKEGVARVVAAMVDPYHEVSGRGI 120

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
                A      E   G+ E ++R+  + F
Sbjct: 121 AMLRAAG----VEASAGLMEAQARRAHRGF 146


>gi|122879285|ref|YP_202359.6| hypothetical protein XOO3720 [Xanthomonas oryzae pv. oryzae
           KACC10331]
          Length = 186

 Score = 80.0 bits (197), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 34/149 (22%), Positives = 58/149 (38%), Gaps = 17/149 (11%)

Query: 10  CALEEAQ-NAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
            A++ ++ N    +  P GAV    +++II+ A NR        AHAE +A  +  + L 
Sbjct: 33  LAIKLSRMNVQEHSGGPFGAVVFGPDHRIIAAAVNRVVPQTTSLAHAENMAYMLAQQRLQ 92

Query: 68  QEILPEV----DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC- 122
              L  V     L  + +PC  C  A   A I RL  GA       +   TQF       
Sbjct: 93  TPRLNAVLSPITLATSAQPCCQCYGATVWAGIDRLLIGARADDVMAL---TQFDEGPLPA 149

Query: 123 -------HHSPEIYPGISEQRSRQIIQDF 144
                      E+   +   ++  +++++
Sbjct: 150 DWVGELTRRGIEVVRDVLRDQACAVLRNY 178


>gi|242011321|ref|XP_002426401.1| cytidine and deoxycytidylate deaminase zinc-binding region,
           putative [Pediculus humanus corporis]
 gi|212510500|gb|EEB13663.1| cytidine and deoxycytidylate deaminase zinc-binding region,
           putative [Pediculus humanus corporis]
          Length = 359

 Score = 80.0 bits (197), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 34/177 (19%), Positives = 62/177 (35%), Gaps = 55/177 (31%)

Query: 8   MSCALEEAQNAALRN-EIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           M   L+ ++N       +   A+ V     +II+   +R         HA ++AI +  R
Sbjct: 190 MKRVLKMSEN--ENGKNV---AMIVDFKERRIIAWGCDRVEVH--PLQHAVMVAIDVVAR 242

Query: 65  IL--SQEILP-------------------------------------------EVDLYVT 79
                   LP                                             DLYV 
Sbjct: 243 TNNGGAWDLPYDELTFDMKNATLNHESSSMDKVKLKAGEVDDDDDDEAPYLCTGYDLYVA 302

Query: 80  LEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQR 136
            EPC MCA ++  +RI+R+++   NP+ G + +    +T+   +H  E++  +  + 
Sbjct: 303 KEPCVMCAMSLVHSRIKRVFFHVRNPERGALASACHVHTIKDLNHHYEVFEFVKAKE 359


>gi|307609932|emb|CBW99459.1| riboflavin biosynthesis protein RibD [Legionella pneumophila 130b]
          Length = 357

 Score = 80.0 bits (197), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 39/111 (35%), Positives = 50/111 (45%), Gaps = 17/111 (15%)

Query: 4   GNVFMSCALEEAQ--NAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
              F+  ALE+A+           VGAVAV N  II++A +R       T HAE L +  
Sbjct: 2   HEQFLLAALEQAKLGRGFCAPNPSVGAVAVQNGNIIAQAWHR----GAGTPHAEQLLL-- 55

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPK 106
             +IL Q   P V LYVTLEPC        C  AI    I  + +   +P 
Sbjct: 56  -SQILPQT--PGVTLYVTLEPCNHWGKTPPCVDAIINHGIEEVVFSYFDPN 103


>gi|294670|gb|AAA90930.1| putative [Gordonia rubripertincta]
          Length = 175

 Score = 80.0 bits (197), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 24/99 (24%), Positives = 39/99 (39%), Gaps = 13/99 (13%)

Query: 8   MSCALEEAQNAALRNEIPVGA-----VAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
           ++ ALEEA           GA     +  L+ +++SR  N+  +  D ++H E  A R  
Sbjct: 33  LAVALEEAHIGLAE-----GASDWRSIFTLDGELVSRGHNQRIQDNDPSSHGETDAFRNA 87

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
            R        +  L  TL PC  C   +      ++  G
Sbjct: 88  GRHT-TWR--DKILVTTLAPCWYCTGMVRQFGFAKVVMG 123


>gi|313885967|ref|ZP_07819705.1| riboflavin biosynthesis protein RibD [Porphyromonas asaccharolytica
           PR426713P-I]
 gi|312924497|gb|EFR35268.1| riboflavin biosynthesis protein RibD [Porphyromonas asaccharolytica
           PR426713P-I]
          Length = 343

 Score = 80.0 bits (197), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 35/152 (23%), Positives = 56/152 (36%), Gaps = 21/152 (13%)

Query: 3   KGNVFMSCALEEAQNAALRN----EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
              ++M   L+ A  A  +        VG+V V  +KII    +          HAE++A
Sbjct: 11  SDQIYMQRCLQLA--ALAQGRTSPNPMVGSVIVYKDKIIGEGYHHYAGA----PHAEVMA 64

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
            R     L   ++ +   YV+LEPC        CA  ++  R  R+     +P       
Sbjct: 65  WRSVPEELRS-VIGKATWYVSLEPCAHYGKTPPCAELLAGLRPARVVIAMLDPFAKVDGR 123

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
           G      A      E+  G  EQ +  + + F
Sbjct: 124 GVARLREAG----IEVSIGCLEQAAIALNRHF 151


>gi|255561486|ref|XP_002521753.1| hydrolase, putative [Ricinus communis]
 gi|223538966|gb|EEF40563.1| hydrolase, putative [Ricinus communis]
          Length = 423

 Score = 80.0 bits (197), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 18/65 (27%), Positives = 33/65 (50%)

Query: 72  PEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPG 131
              D+Y+  EPCTMCA A+   RIRR+++   NP  G + +  +     + +H   ++  
Sbjct: 344 TGYDIYMVWEPCTMCAMALVHQRIRRIFFAFPNPNAGALGSVYRLQGEKSLNHHYAVFRV 403

Query: 132 ISEQR 136
           +  + 
Sbjct: 404 VLPEE 408


>gi|326382172|ref|ZP_08203864.1| riboflavin biosynthesis protein RibD [Gordonia neofelifaecis NRRL
           B-59395]
 gi|326198902|gb|EGD56084.1| riboflavin biosynthesis protein RibD [Gordonia neofelifaecis NRRL
           B-59395]
          Length = 339

 Score = 80.0 bits (197), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 32/139 (23%), Positives = 51/139 (36%), Gaps = 21/139 (15%)

Query: 8   MSCALEE--AQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M  A+ E  A         PVGAV +  +  I+    R +       HAE++A+R     
Sbjct: 10  MRRAIAESEAAQGFTTPNPPVGAVVLDADGEIA-GVGRTQPPGGP--HAEVMALRAAG-- 64

Query: 66  LSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
              E        VTLEPC        C  A+  A I  +++  ++P              
Sbjct: 65  ---ERARGGTAVVTLEPCDHTGRTGPCTQALLSAGIADVHFAVADPNPDAAGGAQTLRAA 121

Query: 120 ATCHHSPEIYPGISEQRSR 138
                  +++PG+ E  +R
Sbjct: 122 -----GVDVHPGVLESEAR 135


>gi|325141619|gb|EGC64081.1| riboflavin biosynthesis protein RibD [Neisseria meningitidis
           961-5945]
 gi|325141652|gb|EGC64113.1| riboflavin biosynthesis protein RibD [Neisseria meningitidis
           961-5945]
 gi|325141685|gb|EGC64145.1| riboflavin biosynthesis protein RibD [Neisseria meningitidis
           961-5945]
          Length = 369

 Score = 80.0 bits (197), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 33/159 (20%), Positives = 55/159 (34%), Gaps = 24/159 (15%)

Query: 2   KKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
                 M  AL  A       +  P VG V    ++I+ +  +          HAE+ A+
Sbjct: 4   DTDISMMENALRLAALGRFSTSPNPRVGCVIAHGSQIVGQGFHVKAGE----PHAEVHAL 59

Query: 60  RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113
                +           +VTLEPC        CA A+  + + R+     +P       G
Sbjct: 60  HQAGEMA-----KGATAFVTLEPCSHYGRTPPCAEALLRSGVTRVVAAMRDPNPLVAGKG 114

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDF---FKERR 149
                 A      E   G+ E ++R++ + F    + RR
Sbjct: 115 LAMLEAAGI--KTEC--GLLEHQARELNRGFLSRIERRR 149


>gi|222111713|ref|YP_002553977.1| riboflavin biosynthesis protein ribd [Acidovorax ebreus TPSY]
 gi|221731157|gb|ACM33977.1| riboflavin biosynthesis protein RibD [Acidovorax ebreus TPSY]
          Length = 370

 Score = 80.0 bits (197), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 37/156 (23%), Positives = 56/156 (35%), Gaps = 19/156 (12%)

Query: 1   MKKGNVFMSCALEEAQNAA-LRNEIP-VGAVAVLN-NKIISRAGNRNRELKDVTAHAEIL 57
           M   + F+S AL  A  A  L N  P VG V   +   ++ +   +         HAE++
Sbjct: 1   MTDASPFISQALGLAAQALFLSNPNPRVGCVITSDAGAVLGQGFTQQAGG----PHAEVM 56

Query: 58  AIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIE 111
           A+R      +         YVTLEPC        C  A+  A I R+    ++P      
Sbjct: 57  ALRDAAARGNDVR--GATAYVTLEPCAHQGRTGPCCDALIQAGIARVVASVADPNPLVAG 114

Query: 112 NGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
            G      A       +  G     +R++   FF  
Sbjct: 115 QGFARLRAAG----VAVEAGPGAAETRELNIGFFSR 146


>gi|226304136|ref|YP_002764094.1| deaminase [Rhodococcus erythropolis PR4]
 gi|226183251|dbj|BAH31355.1| putative deaminase [Rhodococcus erythropolis PR4]
          Length = 159

 Score = 79.6 bits (196), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 25/102 (24%), Positives = 43/102 (42%), Gaps = 2/102 (1%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +   +E A  A    + P G+V    +   ++   NR     D T H E    R   + L
Sbjct: 9   LRRCVELATEALDAGDEPFGSVLAAADGTFLAEDRNR-IAGGDNTRHPEFELARWAAQYL 67

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGG 108
           + E      ++ + E C MC+AA +   + R+ Y  S+ + G
Sbjct: 68  TPEERSTATVFTSGEHCAMCSAAHAWVGLGRIVYICSSAQLG 109


>gi|268611051|ref|ZP_06144778.1| dCMP deaminase [Ruminococcus flavefaciens FD-1]
          Length = 160

 Score = 79.6 bits (196), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 34/120 (28%), Positives = 46/120 (38%), Gaps = 25/120 (20%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKD---------- 49
           +     FM  A+  AQ +   N   VGA  V + +KI+S   N      D          
Sbjct: 7   ISWDEYFMGIAMLSAQRSKD-NSTQVGACIVNDEHKIVSVGYNGMPTGCDDDEMPWERSA 65

Query: 50  ---------VTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
                       HAE+ AI       +   L    +YVTL PC  CA AI  + I+R+ Y
Sbjct: 66  ENELDTKYPFVCHAELNAILN----SNIGNLSGCTVYVTLFPCNECAKAIIQSGIKRVVY 121


>gi|254441291|ref|ZP_05054784.1| riboflavin biosynthesis protein RibD [Octadecabacter antarcticus
           307]
 gi|198251369|gb|EDY75684.1| riboflavin biosynthesis protein RibD [Octadecabacter antarcticus
           307]
          Length = 370

 Score = 79.6 bits (196), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 34/149 (22%), Positives = 48/149 (32%), Gaps = 27/149 (18%)

Query: 8   MSCALEEAQNAALR-NEIP-VGAVAVLNNK----IISRAGNRNRELKDVTAHAEILAIRM 61
           M  AL   +    R    P VG V V  N+    +I R             HAE  A+  
Sbjct: 1   MGMALSLGRRGLGRVWPNPNVGCVIVRPNENGGRVIGRGW----TADGGRPHAETRALD- 55

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
                          YVTLEPC        C  A+  A + R+     +P       G  
Sbjct: 56  ------GIDADGATSYVTLEPCAHHGKTPPCVDALIGANVGRVVIATGDPDPRVAGKGVA 109

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDF 144
               A      ++  G+ E  +R+ +  F
Sbjct: 110 MLRAAG----IDVITGVREHEAREDMAGF 134


>gi|84625170|ref|YP_452542.1| hypothetical protein XOO_3513 [Xanthomonas oryzae pv. oryzae MAFF
           311018]
 gi|188575398|ref|YP_001912327.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Xanthomonas oryzae pv. oryzae PXO99A]
 gi|84369110|dbj|BAE70268.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae MAFF
           311018]
 gi|188519850|gb|ACD57795.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Xanthomonas oryzae pv. oryzae PXO99A]
          Length = 186

 Score = 79.6 bits (196), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 34/149 (22%), Positives = 58/149 (38%), Gaps = 17/149 (11%)

Query: 10  CALEEAQ-NAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
            A++ ++ N    +  P GAV    +++II+ A NR        AHAE +A  +  + L 
Sbjct: 33  LAIKLSRMNVQEHSGGPFGAVVFGPDHRIIAAAVNRVVPQTTSLAHAENMAYMLAQQRLQ 92

Query: 68  QEILPEV----DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC- 122
              L  V     L  + +PC  C  A   A I RL  GA       +   TQF       
Sbjct: 93  TPRLNAVLSPITLATSAQPCCQCYGATVWAGIDRLLIGARADDVMAL---TQFDEGPLPA 149

Query: 123 -------HHSPEIYPGISEQRSRQIIQDF 144
                      E+   +   ++  +++++
Sbjct: 150 DWVGELTRRGIEVVRDVLRDQACAVLRNY 178


>gi|302541276|ref|ZP_07293618.1| cytidine/deoxycytidylate deaminase, zinc-binding region
           [Streptomyces hygroscopicus ATCC 53653]
 gi|302458894|gb|EFL21987.1| cytidine/deoxycytidylate deaminase, zinc-binding region
           [Streptomyces himastatinicus ATCC 53653]
          Length = 158

 Score = 79.6 bits (196), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 26/107 (24%), Positives = 44/107 (41%), Gaps = 3/107 (2%)

Query: 1   MKKGNV-FMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILA 58
           M   ++  +   +E A  A    + P G+V V  +  +++   N+     D T H E   
Sbjct: 1   MTDDDLRHLRRCVELATEALEAGDEPFGSVLVAADGTVLAEDHNQV-AGGDHTRHPEFAL 59

Query: 59  IRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNP 105
            R     L+        +Y + E C MCAAA     + R+ Y +S+ 
Sbjct: 60  ARWAAARLTPAERAAATVYTSGEHCPMCAAAHGWVGLGRIVYASSSE 106


>gi|119899093|ref|YP_934306.1| AMP deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Azoarcus sp. BH72]
 gi|119671506|emb|CAL95419.1| AMP deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Azoarcus sp. BH72]
          Length = 363

 Score = 79.6 bits (196), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 30/128 (23%), Positives = 48/128 (37%), Gaps = 19/128 (14%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC-- 83
           VG V V + +I+    ++        AHAE+ A+       + E       YVTLEPC  
Sbjct: 31  VGCVLVRDGEIVGEGWHQRAGE----AHAEVHAL-----RAAGERAAGATAYVTLEPCSH 81

Query: 84  ----TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139
                 C  A+  A +RR+     +P      +G      A      +   G+ E  +R+
Sbjct: 82  FGRTPPCCEALVAAGVRRVVAAMEDPNPLVAGSGLARLRAAG----IDTAHGLLESEARE 137

Query: 140 IIQDFFKE 147
           +   F   
Sbjct: 138 LNIGFISR 145


>gi|260655489|ref|ZP_05860977.1| deoxycytidylate deaminase [Jonquetella anthropi E3_33 E1]
 gi|260629937|gb|EEX48131.1| deoxycytidylate deaminase [Jonquetella anthropi E3_33 E1]
          Length = 180

 Score = 79.6 bits (196), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 32/127 (25%), Positives = 47/127 (37%), Gaps = 28/127 (22%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGN--------------RNRELKD 49
            + FM  AL  A  +       VGAV V + ++IS   N                 +L  
Sbjct: 9   DSYFMMLALVAATRSTCLRRR-VGAVIVRHGQVISTGYNGAPRGTPHCSETGCLRAQLGI 67

Query: 50  VTA---------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
            +          HAE+ AI          +  + +LY T  PC  C+ A+  A IRR+ Y
Sbjct: 68  PSGQKHELCRGSHAEMNAI--ALAASQGVVTDDGELYCTHSPCVFCSKALINAGIRRVVY 125

Query: 101 --GASNP 105
             G  + 
Sbjct: 126 LQGYPDE 132


>gi|315126753|ref|YP_004068756.1| cytidine/deoxycytidylate deaminase, zinc-binding region
           [Pseudoalteromonas sp. SM9913]
 gi|315015267|gb|ADT68605.1| cytidine/deoxycytidylate deaminase, zinc-binding region
           [Pseudoalteromonas sp. SM9913]
          Length = 158

 Score = 79.6 bits (196), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 24/100 (24%), Positives = 38/100 (38%), Gaps = 2/100 (2%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIR 60
           +     +   +  A+ A    + P G+V V     +     NR     D T H E    R
Sbjct: 3   ETDLAHLKRTVVLAKEALEAGDEPFGSVLVDAEGNVCMEDRNRV-AGGDHTRHPEFEIAR 61

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
                ++ E      +Y + E C MCAAA +   + R+ Y
Sbjct: 62  WAANNMTPEQRAGATVYTSGEHCPMCAAAHAWVGLGRIMY 101


>gi|239998220|ref|ZP_04718144.1| putative diaminohydroxyphosphoribosylaminopyrimidine deaminase
           [Neisseria gonorrhoeae 35/02]
 gi|268594076|ref|ZP_06128243.1| riboflavin biosynthesis protein RibD [Neisseria gonorrhoeae 35/02]
 gi|268547465|gb|EEZ42883.1| riboflavin biosynthesis protein RibD [Neisseria gonorrhoeae 35/02]
          Length = 369

 Score = 79.6 bits (196), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 33/153 (21%), Positives = 54/153 (35%), Gaps = 24/153 (15%)

Query: 8   MSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M  AL  A       +  P VG V     +I+ +  +          HAE+ A+     +
Sbjct: 10  MENALRLAALGRFSTSPNPRVGCVIAHGRQIVGQGFHVKAGE----PHAEVHALHQAGEM 65

Query: 66  LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
                      +VTLEPC        CA A+  + + R+     +P       G      
Sbjct: 66  A-----KGATAFVTLEPCSHYGRTPPCAEALLRSGVTRVVAAMRDPNPPVAGKGLVLLKA 120

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDF---FKERR 149
           A      E   G+ E ++R++ + F    + RR
Sbjct: 121 AGI--KTEC--GLLENKARELNRGFLSRIERRR 149


>gi|78776348|ref|YP_392663.1| CMP/dCMP deaminase, zinc-binding [Sulfurimonas denitrificans DSM
           1251]
 gi|78496888|gb|ABB43428.1| CMP/dCMP deaminase, zinc-binding [Sulfurimonas denitrificans DSM
           1251]
          Length = 145

 Score = 79.6 bits (196), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 33/123 (26%), Positives = 51/123 (41%), Gaps = 29/123 (23%)

Query: 1   MKKGNVFMSCALEEAQNAA---LRNEIPVGAVAVLNNKIISRAGN--------RNRELKD 49
           M     F++ A+E A+ +     +    VGAV V + +I+S   N             +D
Sbjct: 1   MLSDENFINIAIEIAKASKCVSKQ----VGAVIVKDGRILSTGYNGTPAGYINCREHWED 56

Query: 50  V-TA-----------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRR 97
             T            HAE+ AI    R      +    +YVTLEPC+ C+  I  + I+R
Sbjct: 57  KYTHEHHEWSKTYEIHAEMNAIIWAARKGIS--IENATIYVTLEPCSECSKNIIASGIQR 114

Query: 98  LYY 100
           + Y
Sbjct: 115 IVY 117


>gi|260655866|ref|ZP_05861335.1| riboflavin biosynthesis protein RibD [Jonquetella anthropi E3_33
           E1]
 gi|260629482|gb|EEX47676.1| riboflavin biosynthesis protein RibD [Jonquetella anthropi E3_33
           E1]
          Length = 358

 Score = 79.6 bits (196), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 34/153 (22%), Positives = 53/153 (34%), Gaps = 24/153 (15%)

Query: 8   MSCALEEA-QNAALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M  AL  A + A   +  P VG V V +  +I+   +R        A             
Sbjct: 1   MRMALSLAARGAGTTSPNPMVGCVIVRDGHVIATGWHRAPGAPHAEA---------AALA 51

Query: 66  LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
            + E      +YV LEPC        CA A+  A++ R+  G  +P       G      
Sbjct: 52  AAGERAEGATVYVNLEPCAHQGRTPPCAPALVSAKVVRVVAGLVDPFPQVAGKGIGILRE 111

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFF---KERR 149
           A      E+   +  + S  + + F    K +R
Sbjct: 112 AG----IEVDCPVLAEESAWLNRGFLSAVKRKR 140


>gi|227512166|ref|ZP_03942215.1| competence protein ComEB [Lactobacillus buchneri ATCC 11577]
 gi|227084560|gb|EEI19872.1| competence protein ComEB [Lactobacillus buchneri ATCC 11577]
          Length = 167

 Score = 79.6 bits (196), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 31/115 (26%), Positives = 45/115 (39%), Gaps = 18/115 (15%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKD----------- 49
           +K    FM  A+  A  +     + VGAV V + +II+   N +    D           
Sbjct: 14  IKWDQYFMMQAVLLASRSTCER-LSVGAVIVRDKRIIAGGYNGSVAGDDHCIDVGCYLVD 72

Query: 50  ----VTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
                T HAE+ AI    +          ++YVT  PC  C   +  A IRR+ Y
Sbjct: 73  GHCVRTIHAEMNAILQCAKFGESTD--NAEIYVTDFPCLQCTKMLLQAGIRRINY 125


>gi|127512238|ref|YP_001093435.1| CMP/dCMP deaminase, zinc-binding [Shewanella loihica PV-4]
 gi|126637533|gb|ABO23176.1| CMP/dCMP deaminase, zinc-binding [Shewanella loihica PV-4]
          Length = 273

 Score = 79.6 bits (196), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 36/147 (24%), Positives = 52/147 (35%), Gaps = 22/147 (14%)

Query: 7   FMSCALEEAQNAALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           +M  A+++ + +  +   P VGAV V     +          K+ T HAE  AI      
Sbjct: 9   YMKQAVDQMRMSEGKG--PKVGAVIVTKGHQVIAGH-----KKNGT-HAERAAIEEAQEK 60

Query: 66  LSQEILPEVDLYVTLEPCT-------MCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
                L    LY TLEPC         C+  IS   I+ +Y G  +P       G +   
Sbjct: 61  KI--DLRGATLYSTLEPCVSVGSKKEACSDLISRVGIKTVYIGRYDPNPNIQRLGWKKLR 118

Query: 119 LATCH-HSPEIYPGISEQRSRQIIQDF 144
                 H  +I          +I Q F
Sbjct: 119 DEGISLHDFDIE---FRNEIDEINQTF 142


>gi|111019584|ref|YP_702556.1| hypothetical protein RHA1_ro02593 [Rhodococcus jostii RHA1]
 gi|110819114|gb|ABG94398.1| conserved hypothetical protein [Rhodococcus jostii RHA1]
          Length = 159

 Score = 79.6 bits (196), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 22/94 (23%), Positives = 38/94 (40%), Gaps = 2/94 (2%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKI-ISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +   +E A+ A    + P G+V    + + ++   NR     D T H E    R     +
Sbjct: 10  LRRCVELAREAVEAGDEPFGSVLASADGVALAEDRNRV-AGGDATRHPEFELARWAAENM 68

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
             E      ++ + E C MC+AA     + R+ Y
Sbjct: 69  PPEERARATVFTSGEHCPMCSAAHGWVGLGRIVY 102


>gi|56420832|ref|YP_148150.1| riboflavin-specific deaminase [Geobacillus kaustophilus HTA426]
 gi|56380674|dbj|BAD76582.1| riboflavin-specific deaminase
           (diaminohydroxyphosphoribosylaminopyrimidine deaminase ;
           5-amino-6-(5-phosphoribosylamino)uracil reductase )
           [Geobacillus kaustophilus HTA426]
          Length = 380

 Score = 79.6 bits (196), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 33/166 (19%), Positives = 53/166 (31%), Gaps = 47/166 (28%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGN---------------RNR 45
           M     +M  AL+ A+    +                  + N                  
Sbjct: 1   MHNDEHYMRLALDVAKAGVGQ-----------------TSPNPAVGAVVVNGGTVVGLGG 43

Query: 46  ELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLY 99
            LK    HAE+ AIRM              +YVTLEPC        CA  +  A +RR+ 
Sbjct: 44  HLKAGEPHAEVYAIRMAGEKA-----RGATVYVTLEPCSHYGKTPPCADLLIQAGVRRVV 98

Query: 100 YGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
              ++P       G      A      ++  G+ +  + ++ + FF
Sbjct: 99  VATTDPNPLVAGKGIAKLRQAG----IDVDVGVLKDEADELNRMFF 140


>gi|261417867|ref|YP_003251549.1| riboflavin biosynthesis protein RibD [Geobacillus sp. Y412MC61]
 gi|319767321|ref|YP_004132822.1| riboflavin biosynthesis protein RibD [Geobacillus sp. Y412MC52]
 gi|261374324|gb|ACX77067.1| riboflavin biosynthesis protein RibD [Geobacillus sp. Y412MC61]
 gi|317112187|gb|ADU94679.1| riboflavin biosynthesis protein RibD [Geobacillus sp. Y412MC52]
          Length = 380

 Score = 79.6 bits (196), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 31/177 (17%), Positives = 49/177 (27%), Gaps = 69/177 (38%)

Query: 1   MKKGNVFMSCALEEAQNA--------------------------ALRNEIPVGAVAVLNN 34
           M     +M  AL+ A+                                E           
Sbjct: 1   MHNDEHYMRLALDVAKAGVGQTSPNPAVGAVVVNGGTVVGLGAHLKAGEP---------- 50

Query: 35  KIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC------TMCAA 88
                             HAE+ AIRM              +YVTLEPC        CA 
Sbjct: 51  ------------------HAEVYAIRMAGEKA-----RGATVYVTLEPCSHYGKTPPCAD 87

Query: 89  AISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
            +  A +RR+    ++P       G      A      ++  G+ +  + ++ + FF
Sbjct: 88  LLIQAGVRRVVVATTDPNPLVAGKGIAKLRQAG----IDVDVGVLKDEADELNRMFF 140


>gi|325283811|ref|YP_004256352.1| riboflavin biosynthesis protein RibD [Deinococcus proteolyticus
           MRP]
 gi|324315620|gb|ADY26735.1| riboflavin biosynthesis protein RibD [Deinococcus proteolyticus
           MRP]
          Length = 376

 Score = 79.6 bits (196), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 40/158 (25%), Positives = 58/158 (36%), Gaps = 26/158 (16%)

Query: 3   KGNVFMSCALEEAQNAALRN--EIPVGAVAVLN----NKIISRAGNRNRELKDVTAHAEI 56
               FM+ AL EA     R     PVG V V       +++ R  +          HAE+
Sbjct: 7   SDEDFMAQALAEAARGLGRTSPNPPVGCVLVQPNGSGGEVVGRGFHPRAGE----PHAEV 62

Query: 57  LAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGI 110
            A+R        E       YVTLEPC        CA A+  A + R+   A +P     
Sbjct: 63  FALREAG-----ERARGATAYVTLEPCSHFGRTPPCADALMAAGVARVVVAAGDPNPQVN 117

Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKER 148
             G +    A       +  G+ E ++ +  Q  F+ R
Sbjct: 118 GRGLERLRAAG----IAVQTGVLEAQAVRQ-QAGFRAR 150


>gi|302671281|ref|YP_003831241.1| CMP/dCMP deaminase zinc-binding domain-containing protein
           [Butyrivibrio proteoclasticus B316]
 gi|302395754|gb|ADL34659.1| CMP/dCMP deaminase zinc-binding domain-containing protein
           [Butyrivibrio proteoclasticus B316]
          Length = 172

 Score = 79.6 bits (196), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 27/100 (27%), Positives = 43/100 (43%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
              +M    E A +A  +     GAV V + KI+  A N     K +  HAE   +    
Sbjct: 5   DENYMKRCYELAISAGKKGFDTFGAVLVCDGKILEEAENTADFEKKIFGHAEFNLVHKCA 64

Query: 64  RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
              + +IL +  +Y +  PC  C AAI+   + ++  G S
Sbjct: 65  NKYTDDILEKSVVYTSCAPCERCLAAIASLGVHKVVCGVS 104


>gi|282856020|ref|ZP_06265309.1| ComE operon protein 2 [Pyramidobacter piscolens W5455]
 gi|282586139|gb|EFB91418.1| ComE operon protein 2 [Pyramidobacter piscolens W5455]
          Length = 180

 Score = 79.6 bits (196), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 35/125 (28%), Positives = 46/125 (36%), Gaps = 26/125 (20%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGN--------------RNRELKDV 50
           + FM+ AL  A  +       VGAV V + +IIS   N                 +L   
Sbjct: 10  SYFMTLALVAATRSTCLR-RQVGAVIVRDGQIISTGYNGAPKGTPHCFETGCLRTKLGIP 68

Query: 51  TA---------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
           +          HAE+ AI     +          LY T  PC+ C  AI  A IRR+ Y 
Sbjct: 69  SGERHEICRGSHAEMNAIAQAASVGVST--AGASLYCTHSPCSFCTKAIINAGIRRVVYL 126

Query: 102 ASNPK 106
            S P 
Sbjct: 127 YSYPD 131


>gi|119945504|ref|YP_943184.1| CMP/dCMP deaminase, zinc-binding [Psychromonas ingrahamii 37]
 gi|119864108|gb|ABM03585.1| CMP/dCMP deaminase, zinc-binding [Psychromonas ingrahamii 37]
          Length = 191

 Score = 79.2 bits (195), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 26/110 (23%), Positives = 42/110 (38%), Gaps = 5/110 (4%)

Query: 8   MSCALEEAQNAALRN-EIPVGAVA--VLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           M+  +  A+    +    P  A    +   K++S   N          HAEI+A+    R
Sbjct: 33  MAFVISAAKKNVEQGSGGPFAAAVFEIETGKLVSLGVNLVTTQGLSILHAEIVALVAAQR 92

Query: 65  ILSQEIL--PEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN 112
            L    L     +L  + EPC MC  AIS + +  +   A++     I  
Sbjct: 93  KLRTYDLAITRHELVTSAEPCAMCLGAISWSGVCHVATAATDQDVSAIGF 142


>gi|89055912|ref|YP_511363.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase /
           diaminohydroxyphosphoribosylaminopyrimidine deaminase
           [Jannaschia sp. CCS1]
 gi|88865461|gb|ABD56338.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase /
           diaminohydroxyphosphoribosylaminopyrimidine deaminase
           [Jannaschia sp. CCS1]
          Length = 365

 Score = 79.2 bits (195), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 26/122 (21%), Positives = 44/122 (36%), Gaps = 21/122 (17%)

Query: 3   KGNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
               +M+ AL          ++   P VG V V   +++ R        +    HAE++A
Sbjct: 2   SDARWMALALSLGARGM--GQVWPNPAVGCVLVREGRVVGRGW----TARGGRPHAEVVA 55

Query: 59  IRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIEN 112
           +     +           YV+LEPC        CA+A+  A + R+     +P       
Sbjct: 56  LGQAGALA-----RGACAYVSLEPCNHVGQTGPCASALIDAGVARVVVACEDPDPRVAGG 110

Query: 113 GT 114
           G 
Sbjct: 111 GI 112


>gi|304388339|ref|ZP_07370452.1| riboflavin biosynthesis protein RibD [Neisseria meningitidis ATCC
           13091]
 gi|304337656|gb|EFM03812.1| riboflavin biosynthesis protein RibD [Neisseria meningitidis ATCC
           13091]
          Length = 369

 Score = 79.2 bits (195), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 32/159 (20%), Positives = 55/159 (34%), Gaps = 24/159 (15%)

Query: 2   KKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
                 M  AL  A       +  P VG V    ++++ +  +          HAE+ A+
Sbjct: 4   DTDISMMENALRLAALGRFSTSPNPRVGCVIAHGSQVVGQGFHVKAGE----PHAEVHAL 59

Query: 60  RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113
                +           +VTLEPC        CA A+  + + R+     +P       G
Sbjct: 60  HQAGEMAQ-----GATAFVTLEPCSHYGRTPPCAEALLRSGVTRVVAAMRDPNPPVAGKG 114

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDF---FKERR 149
                 A      E   G+ E ++R++ + F    + RR
Sbjct: 115 FAMLEAAGI--KTEC--GLLEHQARELNRGFLSRIERRR 149


>gi|297529535|ref|YP_003670810.1| riboflavin biosynthesis protein RibD [Geobacillus sp. C56-T3]
 gi|297252787|gb|ADI26233.1| riboflavin biosynthesis protein RibD [Geobacillus sp. C56-T3]
          Length = 380

 Score = 79.2 bits (195), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 31/177 (17%), Positives = 49/177 (27%), Gaps = 69/177 (38%)

Query: 1   MKKGNVFMSCALEEAQNA--------------------------ALRNEIPVGAVAVLNN 34
           M     +M  AL+ A+                                E           
Sbjct: 1   MHNDEHYMRLALDVAKAGVGQTSPNPAVGAVVVNGGTVVGLGAHLKAGEP---------- 50

Query: 35  KIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC------TMCAA 88
                             HAE+ AIRM              +YVTLEPC        CA 
Sbjct: 51  ------------------HAEVYAIRMAGEKA-----RGATVYVTLEPCSHYGKTPPCAD 87

Query: 89  AISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
            +  A +RR+    ++P       G      A      ++  G+ +  + ++ + FF
Sbjct: 88  LLIQAGVRRVVVATTDPNPLVAGKGIAKLRQAG----IDVDVGVLKDEADELNRMFF 140


>gi|317163508|gb|ADV07049.1| putative diaminohydroxyphosphoribosylaminopyrimidine deaminase
           [Neisseria gonorrhoeae TCDC-NG08107]
          Length = 361

 Score = 79.2 bits (195), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 33/153 (21%), Positives = 54/153 (35%), Gaps = 24/153 (15%)

Query: 8   MSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M  AL  A       +  P VG V     +I+ +  +          HAE+ A+     +
Sbjct: 2   MENALRLAALGRFSTSPNPRVGCVIAHGRQIVGQGFHVKAGE----PHAEVHALHQAGEM 57

Query: 66  LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
                      +VTLEPC        CA A+  + + R+     +P       G      
Sbjct: 58  A-----KGATAFVTLEPCSHYGRTPPCAEALLRSGVTRVVAAMRDPNPPVAGKGLVLLKA 112

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDF---FKERR 149
           A      E   G+ E ++R++ + F    + RR
Sbjct: 113 AGI--KTEC--GLLENKARELNRGFLSRIERRR 141


>gi|218662593|ref|ZP_03518523.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase protein
           [Rhizobium etli IE4771]
          Length = 287

 Score = 79.2 bits (195), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 29/141 (20%), Positives = 47/141 (33%), Gaps = 21/141 (14%)

Query: 4   GNVFMSCALEEAQN--AALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
              FM+ A+  ++           VG + V +  ++ +A            HAE  A+  
Sbjct: 7   DESFMAAAIRLSRRHLGRTATNPSVGCLIVKDGVVVGQA----VTALGGRPHAEPQAL-- 60

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
                + E       YVTLEPC        CA A+    + R+    ++P       G  
Sbjct: 61  ---AEAGEAARGATAYVTLEPCSHHGKTPPCAEALIAHGVARVVISVTDPDPRVSGRGIA 117

Query: 116 FYTLATCHHSPEIYPGISEQR 136
               A      E+  G+ E  
Sbjct: 118 MLREAG----IEVDAGVLEAE 134


>gi|118473539|ref|YP_887383.1| riboflavin biosynthesis protein RibD [Mycobacterium smegmatis str.
           MC2 155]
 gi|118174826|gb|ABK75722.1| riboflavin biosynthesis protein RibD [Mycobacterium smegmatis str.
           MC2 155]
          Length = 335

 Score = 79.2 bits (195), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 30/154 (19%), Positives = 57/154 (37%), Gaps = 28/154 (18%)

Query: 8   MSCALEEAQ--NAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTA--HAEILAIRMG 62
           M  A+++A+    A     PVGAV +  + ++    G +       T   HAE++     
Sbjct: 9   MRLAIDQAEQVKGATYPNPPVGAVILDRDGQVAGVGGTQ------PTGGPHAEVM----- 57

Query: 63  CRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116
               + E        VTLEPC        C   +  A I R+ Y  ++P         + 
Sbjct: 58  ALRAAAERAEGGTAVVTLEPCNHHGRTPPCVDGLVAAGISRVVYAVADPNPVAAGGSARM 117

Query: 117 YTLATCHHSPEIYPGISEQR-SRQIIQDFFKERR 149
            +        E+  G+     +   ++++  ++R
Sbjct: 118 ASS-----GIEVTSGVLSDEVAGGPLREWLHKQR 146


>gi|325916859|ref|ZP_08179107.1| cytosine/adenosine deaminase [Xanthomonas vesicatoria ATCC 35937]
 gi|325536904|gb|EGD08652.1| cytosine/adenosine deaminase [Xanthomonas vesicatoria ATCC 35937]
          Length = 186

 Score = 79.2 bits (195), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 33/149 (22%), Positives = 57/149 (38%), Gaps = 17/149 (11%)

Query: 10  CALEEAQNAAL-RNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
            A+  ++     R+  P GAV    ++ II+ A NR        AHAE +A  +  + L 
Sbjct: 33  LAIALSRMNVEARSGGPFGAVVFGPDHHIIAAAVNRVVPQNTSLAHAENMAYMLAQQRLQ 92

Query: 68  QEILPEV----DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC- 122
              L +V     L  + +PC  C  A   A I RL  GA       +   T+F       
Sbjct: 93  TPRLNDVLSPVTLATSAQPCCQCYGATVWAGIDRLLIGARAEDVMAL---TEFDEGPLPT 149

Query: 123 -------HHSPEIYPGISEQRSRQIIQDF 144
                      E+   +  +++  +++ +
Sbjct: 150 DWIGELTRRGIEVVRDVQREQACAVLRSY 178


>gi|289627113|ref|ZP_06460067.1| CMP/dCMP deaminase, zinc-binding protein [Pseudomonas syringae pv.
           aesculi str. NCPPB3681]
 gi|330869937|gb|EGH04646.1| CMP/dCMP deaminase, zinc-binding protein [Pseudomonas syringae pv.
           aesculi str. 0893_23]
          Length = 271

 Score = 79.2 bits (195), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 31/110 (28%), Positives = 43/110 (39%), Gaps = 21/110 (19%)

Query: 8   MSCALEEAQNAALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M+ A+E+ +        P VGAV V N ++IS         K    HAE +AI      L
Sbjct: 11  MNAAIEQLKKCTS---YPKVGAVIVKNGEVISTGYRGEVSGK----HAERVAIE----KL 59

Query: 67  SQEILPEVDLYVTLEPCT---------MCAAAISLARIRRLYYGASNPKG 107
               L    +Y TLEPC           CA  +    +  +  G  +P G
Sbjct: 60  PNPDLTGSTIYTTLEPCVEMHGLQPHKSCAGLLKDLNVEHVVIGVLDPNG 109


>gi|66812266|ref|XP_640312.1| carbohydrate-binding domain-containing protein [Dictyostelium
           discoideum AX4]
 gi|60468325|gb|EAL66333.1| carbohydrate-binding domain-containing protein [Dictyostelium
           discoideum AX4]
          Length = 383

 Score = 79.2 bits (195), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 27/141 (19%), Positives = 46/141 (32%), Gaps = 16/141 (11%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMG 62
              +M  A+  A     +     GA  V  N  ++    N          H E+ AI   
Sbjct: 52  HAKYMRIAINVAVENNSK----FGAAIVHKNGTLMCTGAN---TGGSRMYHGEVKAIMNC 104

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA-- 120
             +  +    +  LY T EPC MC+AA    +  ++ + +            Q    A  
Sbjct: 105 TDLYGKATWEDHYLYTTGEPCPMCSAAAMWTKFDKVIFASYVSVMYCERCFNQLPMDANE 164

Query: 121 ------TCHHSPEIYPGISEQ 135
                   +H+  +  G+ E 
Sbjct: 165 IFKLGYGINHNTVLIGGVLEN 185


>gi|313768407|ref|YP_004062087.1| hypothetical protein MpV1_204 [Micromonas sp. RCC1109 virus MpV1]
 gi|312599103|gb|ADQ91127.1| hypothetical protein MpV1_204 [Micromonas sp. RCC1109 virus MpV1]
          Length = 145

 Score = 79.2 bits (195), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 33/116 (28%), Positives = 50/116 (43%), Gaps = 24/116 (20%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP-----VGAVAVLNNKIISRAGNR-----------N 44
           +     FM  A    Q A++R+  P     VG V V NN++IS   N             
Sbjct: 5   ISWDEYFMQTA----QLASVRS--PCERLKVGCVLVKNNRLISMGYNGFLGGCEHKSIVR 58

Query: 45  RELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
              +  T HAEI AI    +  +   + +   YVT  PC  C  A++ + I+++YY
Sbjct: 59  DGHEQATIHAEINAITDAAKRGAS--IDDCVAYVTHYPCLNCYKALASSGIKKVYY 112


>gi|110679096|ref|YP_682103.1| riboflavin biosynthesis protein ribD [Roseobacter denitrificans OCh
           114]
 gi|109455212|gb|ABG31417.1| riboflavin biosynthesis protein ribD [Roseobacter denitrificans OCh
           114]
          Length = 365

 Score = 79.2 bits (195), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 37/155 (23%), Positives = 57/155 (36%), Gaps = 21/155 (13%)

Query: 1   MKKGNVFMSCALEEAQNAALR--NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           M + + +M+ AL   +    R      VG V V + +II R   +         HA    
Sbjct: 1   MTEASRYMALALSLGRRGFGRVWPNPAVGCVIVKDGRIIGRGWTQPGGR----PHA---- 52

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
                   +       D+YVTLEPC        CA A+  A + R++    +P       
Sbjct: 53  -ETQALAQAAAQARGADVYVTLEPCAHHGKTPPCAEALVRAGVARVFAATGDPDPRVHGA 111

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
           G +    A  H    +  GI E ++R+    FF  
Sbjct: 112 GFRALEQAGIH----VQSGILEAQARRDNAGFFAR 142


>gi|193215780|ref|YP_001996979.1| CMP/dCMP deaminase [Chloroherpeton thalassium ATCC 35110]
 gi|193089257|gb|ACF14532.1| CMP/dCMP deaminase zinc-binding [Chloroherpeton thalassium ATCC
           35110]
          Length = 179

 Score = 79.2 bits (195), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 30/121 (24%), Positives = 46/121 (38%), Gaps = 27/121 (22%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGN--------------------- 42
              FMS A   +Q A  +    +GAV V +N I++   N                     
Sbjct: 27  DEYFMSVAHLISQRATCKRAH-IGAVIVRDNNILATGYNGAPSGLPHCDDDNCLIYTSTH 85

Query: 43  ---RNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLY 99
                 +    T HAE+ AI    +      + + D+YVT  PC  C  A+    I+++Y
Sbjct: 86  PDGTIEQNCMNTIHAEMNAIIQAAKHGVS--IKDADIYVTASPCINCLKALINVGIKQIY 143

Query: 100 Y 100
           Y
Sbjct: 144 Y 144


>gi|319409860|emb|CBY90173.1| riboflavin biosynthesis protein RibD [includes:
           diaminohydroxyphosphoribosylaminopyrimidine deaminase
           (riboflavin-specific deaminase) and
           5-amino-6-(5-phosphoribosylamino)uracil reductase (HTP
           reductase) [Neisseria meningitidis WUE 2594]
          Length = 369

 Score = 79.2 bits (195), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 32/159 (20%), Positives = 55/159 (34%), Gaps = 24/159 (15%)

Query: 2   KKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
                 M  AL  A       +  P VG V    ++++ +  +          HAE+ A+
Sbjct: 4   DTDISMMENALRLAALGRFSTSPNPRVGCVIAHGSQVVGQGFHVKAGE----PHAEVHAL 59

Query: 60  RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113
                +           +VTLEPC        CA A+  + + R+     +P       G
Sbjct: 60  HQAGEMAQ-----GATAFVTLEPCSHYGRTPPCAEALLRSGVTRVVAAMRDPNPPVAGKG 114

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDF---FKERR 149
                 A      E   G+ E ++R++ + F    + RR
Sbjct: 115 FAMLEAAGI--KTEC--GLLEHQARELNRGFLSRIERRR 149


>gi|227524104|ref|ZP_03954153.1| competence protein ComEB [Lactobacillus hilgardii ATCC 8290]
 gi|227088735|gb|EEI24047.1| competence protein ComEB [Lactobacillus hilgardii ATCC 8290]
          Length = 167

 Score = 79.2 bits (195), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 31/115 (26%), Positives = 45/115 (39%), Gaps = 18/115 (15%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKD----------- 49
           +K    FM  A+  A  +     + VGAV V + +II+   N +    D           
Sbjct: 14  IKWDQYFMMQAVLLASRSTCER-LSVGAVIVRDKRIIAGGYNGSVVGDDHCIDVGCYLVD 72

Query: 50  ----VTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
                T HAE+ AI    +          ++YVT  PC  C   +  A IRR+ Y
Sbjct: 73  GHCVRTIHAEMNAILQCAKFGESTD--NAEIYVTDFPCLQCTKMLLQAGIRRINY 125


>gi|184200815|ref|YP_001855022.1| diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Kocuria rhizophila DC2201]
 gi|183581045|dbj|BAG29516.1| diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Kocuria rhizophila DC2201]
          Length = 434

 Score = 79.2 bits (195), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 28/130 (21%), Positives = 51/130 (39%), Gaps = 18/130 (13%)

Query: 26  VGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84
           VGA  +    +++    +R       T HAE+  ++      +   L    L VTLEPC 
Sbjct: 35  VGAALLGPTGQLLHVGHHR----GAGTPHAEVDVLQQARAARTP--LEGSTLVVTLEPCH 88

Query: 85  M------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSR 138
                  C AA+  A + R+ Y  ++P       G    +     H   +  G+    +R
Sbjct: 89  HTGRTGPCTAAVEAAGVPRVVYALADPTAEARGGGAALRS-----HGVHVRAGLLADEAR 143

Query: 139 QIIQDFFKER 148
           ++ + + + R
Sbjct: 144 ELNERWLRAR 153


>gi|32474082|ref|NP_867076.1| riboflavin bifunctional biosynthesis protein RibG [Rhodopirellula
           baltica SH 1]
 gi|32444619|emb|CAD74621.1| riboflavin bifunctional biosynthesis protein RibG [Rhodopirellula
           baltica SH 1]
          Length = 427

 Score = 78.8 bits (194), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 34/154 (22%), Positives = 61/154 (39%), Gaps = 22/154 (14%)

Query: 4   GNVFMSCALEEAQNAALRNEI--PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
              +M+ A+E A     + E   PVG   V ++  I +  ++         HAE+ A+  
Sbjct: 49  DVRWMTEAIELAYQGRGKVEPNPPVGCALVRDSVCIGKGYHQRFGG----PHAEVEAL-- 102

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
                S +       YV+LEPC        CA A+  A++ R+     +P       G +
Sbjct: 103 ----SSCDDATGATAYVSLEPCCHHGKTPPCADALIRAKVARVVVSVVDPFDQVDGGGIE 158

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
               A      E+  GI+++   +++  + K  R
Sbjct: 159 KLRAAG----IEVVTGIAKEAGEELLAAYLKRVR 188


>gi|134095549|ref|YP_001100624.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase
           (N-terminal)/5-amino-6-(5-phosphoribosylamino) uracil
           reductase [Herminiimonas arsenicoxydans]
 gi|133739452|emb|CAL62503.1| bifunctional riboflavin biosynthesis protein ribD [Includes:
           Diaminohydroxyphosphoribosylaminopyrimidine deaminase
           (Riboflavin-specific deaminase);
           5-amino-6-(5-phosphoribosylamino)uracil reductase (HTP
           reductase)] [Herminiimonas arsenicoxydans]
          Length = 363

 Score = 78.8 bits (194), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 37/144 (25%), Positives = 53/144 (36%), Gaps = 18/144 (12%)

Query: 9   SCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
             ALE A            VG V V  N++I     +        AHAE+ A+       
Sbjct: 11  RLALELAARGMFTTAPNPRVGCVIVKENQVIGSGYTQPAGH----AHAEVQALNDAANK- 65

Query: 67  SQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
               +    +YVTLEPC        CA A+  AR+ R+    ++P       G      A
Sbjct: 66  -GYDVAGSTVYVTLEPCSHHGRTPPCADALIRARVARVVAAIADPNPLVAGQGLARLEAA 124

Query: 121 TCHHSPEIYPGISEQRSRQIIQDF 144
                 E+  G+ E  +R+I   F
Sbjct: 125 G----IEVACGVLEAEAREINIGF 144


>gi|306841987|ref|ZP_07474661.1| riboflavin biosynthesis protein RibD [Brucella sp. BO2]
 gi|306843711|ref|ZP_07476311.1| riboflavin biosynthesis protein RibD [Brucella sp. BO1]
 gi|306276021|gb|EFM57730.1| riboflavin biosynthesis protein RibD [Brucella sp. BO1]
 gi|306287915|gb|EFM59332.1| riboflavin biosynthesis protein RibD [Brucella sp. BO2]
          Length = 373

 Score = 78.8 bits (194), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 33/145 (22%), Positives = 49/145 (33%), Gaps = 21/145 (14%)

Query: 3   KGNVFMSCALEEAQ--NAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
               FM   +  A+           VG + V +  I+ R             HAE  A+ 
Sbjct: 14  NDLRFMEATIRYARRHKGLTGTNPSVGTIIVKDGVIVGRG----VTALGGRPHAEPQAL- 68

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
                 + E       YVTLEPC        CA A+  A + R+   A++P       G 
Sbjct: 69  ----AEAGEAARGATAYVTLEPCAHHGRTPPCAQALVRAGVTRVVVAATDPDERVSGKGF 124

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQ 139
                A      E+ PGI  +++  
Sbjct: 125 AILREAG----IEVVPGILPEQAAD 145


>gi|46575874|dbj|BAB88916.2| deaminase [Burkholderia glumae]
          Length = 360

 Score = 78.8 bits (194), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 37/146 (25%), Positives = 52/146 (35%), Gaps = 21/146 (14%)

Query: 8   MSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           M+ ALE A         P   VG V V +  +I     +     D   HAE+ A++    
Sbjct: 1   MAKALELAARGLYTT-TPNPRVGCVIVKHGMLIGEGYTQP-AGHD---HAEVRAMKDA-- 53

Query: 65  ILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
                 L     YVTLEPC        CA  +  A I   + G   P+      G     
Sbjct: 54  RSRGHELRGATAYVTLEPCSHYGRTPPCAKGLVEAGIAP-WCGDGGPEPAVSGRGYAMLR 112

Query: 119 LATCHHSPEIYPGISEQRSRQIIQDF 144
            A      E+  G+ E  +R++   F
Sbjct: 113 EAG----IEVRGGVLEDEARELNIGF 134


>gi|254718884|ref|ZP_05180695.1| riboflavin biosynthesis protein RibD [Brucella sp. 83/13]
 gi|265983870|ref|ZP_06096605.1| riboflavin biosynthesis protein RibD [Brucella sp. 83/13]
 gi|264662462|gb|EEZ32723.1| riboflavin biosynthesis protein RibD [Brucella sp. 83/13]
          Length = 373

 Score = 78.8 bits (194), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 32/145 (22%), Positives = 49/145 (33%), Gaps = 21/145 (14%)

Query: 3   KGNVFMSCALEEAQ--NAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
               FM   +  A+           VG + V +  I+ R             HAE  A+ 
Sbjct: 14  NDLRFMEATIRYARRHKGLTGTNPSVGTIIVKDGVIVGRG----VTALGGRPHAEPQAL- 68

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
                 + E       YVTLEPC        CA A+  + + R+   A++P       G 
Sbjct: 69  ----AEAGEAARGATAYVTLEPCAHHGRTPPCAEALVRSGVARVVVAATDPDERVSGKGF 124

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQ 139
                A      E+ PGI  +++  
Sbjct: 125 AILREAG----IEVVPGILSEQAAD 145


>gi|229819944|ref|YP_002881470.1| CMP/dCMP deaminase zinc-binding [Beutenbergia cavernae DSM 12333]
 gi|229565857|gb|ACQ79708.1| CMP/dCMP deaminase zinc-binding [Beutenbergia cavernae DSM 12333]
          Length = 163

 Score = 78.8 bits (194), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 26/105 (24%), Positives = 43/105 (40%), Gaps = 2/105 (1%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIR 60
                 +   ++ A+ A    + P G++ V     +     NR  +  D T H E+   R
Sbjct: 7   DTDRAHLRRCVDLAREALDDGDEPFGSLLVDATGAVRFEDRNRV-KGGDQTRHPELEIAR 65

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNP 105
                LS E      +Y + E C MC+AA +   + R+ Y AS+ 
Sbjct: 66  WAAAHLSPEERAAAVVYTSGEHCPMCSAAHAWVGLGRIVYAASSE 110


>gi|171676245|ref|XP_001903076.1| hypothetical protein [Podospora anserina S mat+]
 gi|170936188|emb|CAP60848.1| unnamed protein product [Podospora anserina S mat+]
          Length = 685

 Score = 78.8 bits (194), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 19/46 (41%), Positives = 28/46 (60%)

Query: 14  EAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
           +A+ A   NE PVG V V N ++I+R  N     ++ T HAE++AI
Sbjct: 332 QARLALRTNETPVGCVLVHNGRVIARGMNATNVSRNGTRHAELMAI 377



 Score = 61.1 bits (148), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 19/49 (38%), Positives = 30/49 (61%)

Query: 72  PEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
            E  LYVT+EPC MCA+ +   +I+++Y+GA N K GG     + +  +
Sbjct: 448 QESILYVTVEPCVMCASLLRQLKIKKVYFGAVNDKFGGTGGVFRIHKNS 496


>gi|300725950|ref|ZP_07059412.1| cytidine/deoxycytidylate deaminase family protein [Prevotella
           bryantii B14]
 gi|299776801|gb|EFI73349.1| cytidine/deoxycytidylate deaminase family protein [Prevotella
           bryantii B14]
          Length = 144

 Score = 78.8 bits (194), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 33/110 (30%), Positives = 44/110 (40%), Gaps = 15/110 (13%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRN--------RELKDVT---- 51
              ++  A   A+N+  +    VGA+ V +  IIS   N           +  DVT    
Sbjct: 11  DLRYLRMARIWAENSYCKRRK-VGALVVKDKMIISDGYNGTPSGFENICEDDNDVTKPYV 69

Query: 52  AHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
            HAE  AI    R  +        LYVT  PC  CA  I  A I+R+ Y 
Sbjct: 70  LHAEANAITKLARSSNNSD--GSTLYVTASPCIECAKLIIQAGIKRVVYA 117


>gi|166710750|ref|ZP_02241957.1| hypothetical protein Xoryp_04620 [Xanthomonas oryzae pv. oryzicola
           BLS256]
          Length = 186

 Score = 78.4 bits (193), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 35/149 (23%), Positives = 57/149 (38%), Gaps = 17/149 (11%)

Query: 10  CALEEAQ-NAALRNEIPVGAVAVLNNK-IISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
            A+E ++ N   R+  P GA     ++ II+ A NR        AHAE +A  +  + L 
Sbjct: 33  LAIELSRMNVQERSGGPFGAAVFGPDQRIIAAAVNRVVPQTTSLAHAENMAYMLAQQRLQ 92

Query: 68  QEILPEV----DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC- 122
              L  V     L  + +PC  C  A   A I RL  GA       +   TQF       
Sbjct: 93  TPRLNAVLSPITLATSAQPCCQCYGATVWAGIDRLLIGARADDVMAL---TQFDEGPLPA 149

Query: 123 -------HHSPEIYPGISEQRSRQIIQDF 144
                      E+   +   ++  +++++
Sbjct: 150 DWVGELTRRGIEVVRDVLRDQACAVLRNY 178


>gi|118587985|ref|ZP_01545395.1| riboflavin biosynthesis protein [Stappia aggregata IAM 12614]
 gi|118439607|gb|EAV46238.1| riboflavin biosynthesis protein [Stappia aggregata IAM 12614]
          Length = 374

 Score = 78.4 bits (193), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 34/156 (21%), Positives = 56/156 (35%), Gaps = 22/156 (14%)

Query: 4   GNVFMSCALEEAQNAALR-NEIP-VGAVAVL--NNKIISRAGNRNRELKDVTAHAEILAI 59
              FM+ A    +    R    P V A+ V   +   +     R    +   AHAE+ A+
Sbjct: 8   DARFMAAAERLTRRGLGRVWPNPSVAALIVRFEDGAAVVAG--RGVTSRPGMAHAEVNAL 65

Query: 60  RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113
                            YVTLEPC        CA A+  A ++R+  G  +P       G
Sbjct: 66  NQAGEKAQ-----GATCYVTLEPCSHYGRTPPCAKALIEAGVKRVVVGMLDPNPRVAGRG 120

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDF-FKER 148
                 A      E+  G+ E+  + + + F +++ 
Sbjct: 121 VGMLREAG----IEVVVGVREKAMQALYRGFTYRQL 152


>gi|25144639|ref|NP_499445.2| hypothetical protein Y47D3A.14 [Caenorhabditis elegans]
 gi|19571667|emb|CAB55073.2| C. elegans protein Y47D3A.14, confirmed by transcript evidence
           [Caenorhabditis elegans]
          Length = 287

 Score = 78.4 bits (193), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 29/123 (23%), Positives = 57/123 (46%), Gaps = 12/123 (9%)

Query: 17  NAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEIL-PEVD 75
            AA   +   G +AV N++++S      R       H  +  +    +    + L    D
Sbjct: 157 EAARLGD---GCIAVQNDELLSTG----RPSSHPLGHPVMEMVGNLPKRHGDDYLGTGSD 209

Query: 76  LYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI-ENGTQFYTLATCHHSPEI--YPGI 132
           +++  EPC MC+ A+   R++R++Y A N + G + E+G Q +   + +H  E+    G+
Sbjct: 210 VFLITEPCAMCSMALVHFRVKRVFY-ARNSRNGVLKEDGWQLHLEPSINHHYEVFRVEGL 268

Query: 133 SEQ 135
            + 
Sbjct: 269 LDN 271


>gi|19114320|ref|NP_593408.1| tRNA specific adenosine deaminase subunit Tad3 (predicted)
           [Schizosaccharomyces pombe 972h-]
 gi|74638746|sp|Q9P7N4|TAD3_SCHPO RecName: Full=tRNA-specific adenosine deaminase subunit tad3;
           AltName: Full=tRNA-specific adenosine-34 deaminase
           subunit tad3
 gi|7106099|emb|CAB76025.1| tRNA specific adenosine deaminase subunit Tad3 (predicted)
           [Schizosaccharomyces pombe]
          Length = 315

 Score = 78.4 bits (193), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 33/145 (22%), Positives = 60/145 (41%), Gaps = 14/145 (9%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLN--NKIISRAGNRNRELKDVTAHAEILA 58
           +K+    +   +  A  +    EI   A       + +++ + +   +LK+   H  + A
Sbjct: 157 LKRIESILEDLINAAGASHKHGEIGCAAAIYDPTTDTVLAVSVDERSKLKNPINHCVMNA 216

Query: 59  I-----RMGCRILSQ-------EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPK 106
           I     R   R  ++        +  ++ + +T EPC MC+  +  +RIRRL Y    P 
Sbjct: 217 INLVAKRELSRRQNRTDGSKDRYLCKDLTVVMTHEPCVMCSMGLLHSRIRRLIYCKKQPL 276

Query: 107 GGGIENGTQFYTLATCHHSPEIYPG 131
            GGIE+    +  A  +H    Y G
Sbjct: 277 TGGIESLYGIHWRAELNHRYLAYSG 301


>gi|259416594|ref|ZP_05740514.1| riboflavin biosynthesis protein RibD [Silicibacter sp. TrichCH4B]
 gi|259348033|gb|EEW59810.1| riboflavin biosynthesis protein RibD [Silicibacter sp. TrichCH4B]
          Length = 366

 Score = 78.4 bits (193), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 32/152 (21%), Positives = 50/152 (32%), Gaps = 21/152 (13%)

Query: 2   KKGNVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
           K  + FM  AL   +    R      VG V V   +++ R   +         HAE +  
Sbjct: 3   KSDHRFMGLALSLGRRGQGRTWPNPAVGCVIVKQGRVVGRGWTQPGGR----PHAEPM-- 56

Query: 60  RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113
                  +         YV+LEPC        CA A+  A I R+     +        G
Sbjct: 57  ---ALAQAGAAAHGATAYVSLEPCSHHGKTPPCAQALIDAGIARVVAAIEDSDPRVSGQG 113

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
            +    A      ++  GI  + +    + FF
Sbjct: 114 FEMLRAAG----IKVTTGIRTEEAGFDHEGFF 141


>gi|297195567|ref|ZP_06912965.1| riboflavin biosynthesis protein RibD [Streptomyces
           pristinaespiralis ATCC 25486]
 gi|197721390|gb|EDY65298.1| riboflavin biosynthesis protein RibD [Streptomyces
           pristinaespiralis ATCC 25486]
          Length = 363

 Score = 78.4 bits (193), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 30/136 (22%), Positives = 46/136 (33%), Gaps = 25/136 (18%)

Query: 8   MSCALEEAQNAA---LRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
           M  A+  A         N + VG V    +  ++    ++         HAEI A+R   
Sbjct: 10  MRRAITLAARGLGSTSPNPV-VGCVITDASGHVVGEGFHQRAGG----PHAEIHALRAAG 64

Query: 64  RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFY 117
            +           YVTLEPC        CA A+  A + R+ Y  ++P G          
Sbjct: 65  VLA-----RGGTAYVTLEPCNHTGRTGPCAQALVEAGVARVVYAVADPNGEAAGGADTLR 119

Query: 118 TLATCHHSPEIYPGIS 133
                    E+  G+ 
Sbjct: 120 AA-----GIEVEQGLL 130


>gi|78779743|ref|YP_397855.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Prochlorococcus marinus str. MIT 9312]
 gi|78713242|gb|ABB50419.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Prochlorococcus marinus str. MIT 9312]
          Length = 364

 Score = 78.4 bits (193), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 30/153 (19%), Positives = 59/153 (38%), Gaps = 26/153 (16%)

Query: 3   KGNVFMSCALEEAQNAALRNEI---P-VGAVAV-LNNKIISRAGNRNRELKDVTAHAEIL 57
               +M  A+  A  +  + +    P VGAV +  N  +IS   +          HAE++
Sbjct: 7   SHIKWMKRAIFLA--SLGKGKTSPNPLVGAVILDKNGNLISEGFHYKAGE----PHAEVM 60

Query: 58  AIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIE 111
           A     + +         +YV LEPC        C   +  + I+++Y    +P      
Sbjct: 61  AFNNLKKEVKDGY-----MYVNLEPCCHHGKTPPCVDKVISSGIKKIYISIQDPDKRVSG 115

Query: 112 NGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
            G +    A      +++ G+ ++ S ++ + F
Sbjct: 116 KGIKLLKQAG----IKVHLGLCKKESLELNKAF 144


>gi|304570635|ref|YP_831168.2| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Arthrobacter sp. FB24]
          Length = 407

 Score = 78.4 bits (193), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 31/129 (24%), Positives = 48/129 (37%), Gaps = 18/129 (13%)

Query: 26  VGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84
           VGAV +  + + +    +R       TAHAE  AI    R      L    + VTLEPC 
Sbjct: 40  VGAVVIGPDGRQLVTGYHR----GAGTAHAEADAIAQAGR--QGLDLTGSTMVVTLEPCN 93

Query: 85  MC------AAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSR 138
            C      A AI  A I  + Y   +P                      +  G+S + + 
Sbjct: 94  HCGRTGPCAQAIIDAGIASVVYAVDDPHDPAAGGAATLRAA-----GVSVRSGLSARAAF 148

Query: 139 QIIQDFFKE 147
           ++ + +F+ 
Sbjct: 149 ELNRRWFEA 157


>gi|13476938|ref|NP_108508.1| riboflavin-specific deaminase / reductase [Mesorhizobium loti
           MAFF303099]
 gi|14027701|dbj|BAB54294.1| riboflavin-specific deaminase / reductase [Mesorhizobium loti
           MAFF303099]
          Length = 376

 Score = 78.4 bits (193), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 33/150 (22%), Positives = 50/150 (33%), Gaps = 25/150 (16%)

Query: 4   GNVFMSCALEEAQNAALRNEI-P-VGAVAVLNNK----IISRAGNRNRELKDVTAHAEIL 57
              FM+ AL  ++  A R    P VG + V ++     I+               HAE  
Sbjct: 15  DRRFMAAALRLSRRNAGRTSTNPSVGTIIVRDDGAGPMIVGTGVTAVGGR----PHAETE 70

Query: 58  AIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIE 111
           A+     +           YVTLEPC        CA A+  A I R+   AS+P      
Sbjct: 71  ALAEAGELA-----RGATAYVTLEPCAHHGRTPPCANALVNAGIARVVGAASDPDPRVSG 125

Query: 112 NGTQFYTLATCHHSPEIYPGISEQRSRQII 141
            G      A       +   +    + + +
Sbjct: 126 KGYAILRAAG----IVVVEKVLATEAAEQM 151


>gi|183982231|ref|YP_001850522.1| bifunctional riboflavin biosynthesis protein RibG [Mycobacterium
           marinum M]
 gi|183175557|gb|ACC40667.1| bifunctional riboflavin biosynthesis protein RibG [Mycobacterium
           marinum M]
          Length = 339

 Score = 78.4 bits (193), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 33/152 (21%), Positives = 62/152 (40%), Gaps = 24/152 (15%)

Query: 8   MSCALEEA--QNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           M  A+E++           PVGAV V    +++   G +     D   HAE++A+R    
Sbjct: 13  MRLAIEQSMLVKGTTYPNPPVGAVIVDQEGRVVGIGGTQP-SGGD---HAEVVALRKAGG 68

Query: 65  ILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
           + +          VT+EPC        C  A+  AR+  + YG ++P  G    G    +
Sbjct: 69  LAAGA-----IAVVTMEPCNHFGKTPPCVNALIEARVGTVIYGVADPN-GIAGGGAGRLS 122

Query: 119 LATCHHSPEIYPGISEQR-SRQIIQDFFKERR 149
            A      ++  G+     +   ++++  ++R
Sbjct: 123 AAGL----QVRSGVLADHVAAGPLREWLHKQR 150


>gi|116753576|ref|YP_842694.1| CMP/dCMP deaminase, zinc-binding [Methanosaeta thermophila PT]
 gi|116665027|gb|ABK14054.1| CMP/dCMP deaminase, zinc-binding protein [Methanosaeta thermophila
           PT]
          Length = 144

 Score = 78.4 bits (193), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 34/131 (25%), Positives = 48/131 (36%), Gaps = 24/131 (18%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGN--------------RNRELKD 49
              FM  A   A+ +       VGAV V + +I+S   N                 +++ 
Sbjct: 7   DEYFMEIASVVAKRSTCLRNR-VGAVIVRDKRILSTGYNGAPTGLEHCDVAGCLREKVES 65

Query: 50  VTAH-------AEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGA 102
            T H       AE  AI      L    +    LY T +PC +CA  +  ARIRR+ Y  
Sbjct: 66  GTRHELCRAVHAEQNAIIQAA--LHGVSIEGATLYCTHQPCILCAKMMINARIRRVVYRN 123

Query: 103 SNPKGGGIENG 113
             P  G +   
Sbjct: 124 QYPDEGALRFL 134


>gi|332187003|ref|ZP_08388744.1| riboflavin biosynthesis protein RibD [Sphingomonas sp. S17]
 gi|332013013|gb|EGI55077.1| riboflavin biosynthesis protein RibD [Sphingomonas sp. S17]
          Length = 313

 Score = 78.4 bits (193), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 34/151 (22%), Positives = 48/151 (31%), Gaps = 24/151 (15%)

Query: 8   MSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           M  AL  A     R   P   VG + V + ++I R   +         HAE +A+     
Sbjct: 1   MGAALALAGRGIGRT-APNPNVGCILVRDGRVIGRGWTQPGGR----PHAEAMALAEAGE 55

Query: 65  ILSQEILPEVDLYVTLEPC-------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFY 117
                       YVTLEPC         C   +  A +  +     +P       G    
Sbjct: 56  SAC-----GATAYVTLEPCAHVSTRGPACTDLLIAAGVAHIVAAMGDPDPRTNGQGFDRA 110

Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDFFKER 148
             A       +  GI E  +R +I  F   R
Sbjct: 111 RAAG----IAVTTGICESEARAMIAGFLTRR 137


>gi|256823992|ref|YP_003147952.1| cytosine/adenosine deaminase [Kytococcus sedentarius DSM 20547]
 gi|256687385|gb|ACV05187.1| cytosine/adenosine deaminase [Kytococcus sedentarius DSM 20547]
          Length = 175

 Score = 78.4 bits (193), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 25/110 (22%), Positives = 43/110 (39%), Gaps = 2/110 (1%)

Query: 8   MSCALEEAQNAALRNEIP-VGAVAVLNNKIISR-AGNRNRELKDVTAHAEILAIRMGCRI 65
           M+ A++          +P VG V   + +++S    N+  E  D  AHAE++A+R     
Sbjct: 12  MAQAVDACTEHVDAGGLPFVGVVVNADGEMLSEFGVNQVAETGDPMAHAEVVAMRDAMTR 71

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
              + L    L  T EPC +C        I  +Y      +   +    +
Sbjct: 72  HGLDSLTGYTLLATGEPCGLCYRYAVDHGIDTIYVAVDREEVANLGFDYR 121


>gi|320589823|gb|EFX02279.1| cmp/dcmp deaminase, zinc-binding protein [Grosmannia clavigera
           kw1407]
          Length = 178

 Score = 78.0 bits (192), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 33/102 (32%), Positives = 44/102 (43%), Gaps = 10/102 (9%)

Query: 8   MSCALEEAQNAA-LRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTA--HAEILAIRMGC 63
           M+  LE   NA     + P   + V  +N+ +          + V+   HAE    R+  
Sbjct: 25  MTKVLELQHNAHTQHGKRPFAGILVGPDNETVLLLH------QSVSHVEHAEASLARLAA 78

Query: 64  RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNP 105
              SQ  L    LY T EPC MC A I  A I R+ +GASN 
Sbjct: 79  NHYSQPYLWTCTLYSTWEPCAMCTATIYWANIGRVIFGASND 120


>gi|310799415|gb|EFQ34308.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Glomerella graminicola M1.001]
          Length = 247

 Score = 78.0 bits (192), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 31/119 (26%), Positives = 45/119 (37%), Gaps = 26/119 (21%)

Query: 6   VFMSCALEEAQNAALRNEIPV---GAVAVLN-----NKIISRAGNRNRELKDVTAHAEIL 57
            +M  A     N AL N  P    G+V V +      +++    N+N    + T H E++
Sbjct: 63  YWMRQA-----NLALPNPCPFAAFGSVVVNHTAAGLGELVCTGANKNSVTGNPTFHGEMV 117

Query: 58  AIRMGCRILSQEI-------------LPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
           AI     I                    ++ LY   E C MCA+AI  A  +   YG S
Sbjct: 118 AINNCSAIFVDPQGPFKMTPAEALAAFADLTLYTNAESCPMCASAIRWAGFKEYVYGTS 176


>gi|288931740|ref|YP_003435800.1| CMP/dCMP deaminase zinc-binding protein [Ferroglobus placidus DSM
           10642]
 gi|288893988|gb|ADC65525.1| CMP/dCMP deaminase zinc-binding protein [Ferroglobus placidus DSM
           10642]
          Length = 149

 Score = 78.0 bits (192), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 38/142 (26%), Positives = 50/142 (35%), Gaps = 30/142 (21%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGN--------------RNRELKD 49
              FM  A   A+ +    +  VGAV V + +I+S   N                 EL  
Sbjct: 6   DEYFMEIAKVVAKRSTCLRQN-VGAVIVKDKRILSTGYNGAPMGLPHCLDIGCLREELNV 64

Query: 50  VTA---------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
            +          HAE  AI      +    +    LY T +PC MCA  I  A I R+ Y
Sbjct: 65  PSGERHELCRAVHAEQNAIIQAA--VHGVSIKGATLYTTHQPCIMCAKMIINAGIVRVVY 122

Query: 101 GASNPKGGGIENGTQFYTLATC 122
           G    K    E G +F   A  
Sbjct: 123 G----KRYADERGLEFLKEAGI 140


>gi|296272024|ref|YP_003654655.1| riboflavin biosynthesis protein RibD [Arcobacter nitrofigilis DSM
           7299]
 gi|296096199|gb|ADG92149.1| riboflavin biosynthesis protein RibD [Arcobacter nitrofigilis DSM
           7299]
          Length = 335

 Score = 78.0 bits (192), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 32/175 (18%), Positives = 64/175 (36%), Gaps = 41/175 (23%)

Query: 3   KGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
               +M  A++EA         P   VG V V N +I++   ++   +    +HAE+ A+
Sbjct: 4   DDKFYMKLAIDEAWK-YQLLTYPNPAVGCVVVKNGEILAIEAHKEAGM----SHAEVNAL 58

Query: 60  RMG---------------CRILSQEIL-------PEVDLYVTLEPC------TMCAAAIS 91
           +                  R + + +L        + ++YVTLEPC        CA  + 
Sbjct: 59  KAAYLKKHANDTLKIKKSSREIHEYLLKNHNNFFNDCEIYVTLEPCNHIGKTPSCANLLK 118

Query: 92  LARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
             + +R+     +             TL + +   +I     ++ +  ++  F K
Sbjct: 119 ELKPKRVIIAHEDTNKQASGG---IQTLESVN--IDITLDCMKKEAYDLLYPFIK 168


>gi|54022042|ref|YP_116284.1| putative reductase/deaminase [Nocardia farcinica IFM 10152]
 gi|54013550|dbj|BAD54920.1| putative reductase/deaminase [Nocardia farcinica IFM 10152]
          Length = 373

 Score = 78.0 bits (192), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 30/118 (25%), Positives = 41/118 (34%), Gaps = 24/118 (20%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIP------VGAVAVLNNKIISRAGNRNRELKDVTAHAE 55
           ++   F+  A+E A  +      P      VGAV V +   I+   +R     D   HAE
Sbjct: 226 ERDRRFLRRAIELAHAS-----PPSPTAFSVGAVIVADGAEIATGYSR---ETDPKVHAE 277

Query: 56  ILAIRMGCRILSQEILPEVDLYVTLEPC--------TMCAAAISLARIRRLYYGASNP 105
             A+           L    +Y TLEPC          C   I  A I R+      P
Sbjct: 278 EAALNKL--DPRDPRLSRATIYSTLEPCSQRATAGRPPCTDRILAAGIPRVVIAWREP 333


>gi|326318264|ref|YP_004235936.1| riboflavin biosynthesis protein RibD [Acidovorax avenae subsp.
           avenae ATCC 19860]
 gi|323375100|gb|ADX47369.1| riboflavin biosynthesis protein RibD [Acidovorax avenae subsp.
           avenae ATCC 19860]
          Length = 377

 Score = 78.0 bits (192), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 38/147 (25%), Positives = 54/147 (36%), Gaps = 19/147 (12%)

Query: 7   FMSCALEEAQNAALRNEI-P-VGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGC 63
           FM  AL  A+    R    P VG V V    +II +   +         HAE++A+R   
Sbjct: 14  FMQLALRLAEEGLYRTSPNPRVGCVLVDARQQIIGQGSTQRAGG----PHAEVMALRDAR 69

Query: 64  RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFY 117
                        YVTLEPC+       C  A+  A I R+     +P       G +  
Sbjct: 70  ARGHAT--QGAIAYVTLEPCSHHGRTGPCCDALVEAGIARVVASLGDPNPRVAGQGFERL 127

Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDF 144
             A      E+  G   + SR++   F
Sbjct: 128 RAAG----VEVEVGPGAEASRELNIGF 150


>gi|310826939|ref|YP_003959296.1| hypothetical protein ELI_1347 [Eubacterium limosum KIST612]
 gi|308738673|gb|ADO36333.1| hypothetical protein ELI_1347 [Eubacterium limosum KIST612]
          Length = 159

 Score = 78.0 bits (192), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 32/119 (26%), Positives = 42/119 (35%), Gaps = 24/119 (20%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRN-----------RELK 48
           +     FM  AL  A+ +       VGA  V  +NKI++   N                 
Sbjct: 7   LSWDEYFMGIALLAAKRSKDPG-TQVGACIVSPDNKILTMGYNGMPTGCHDDNMPWEREG 65

Query: 49  DVT-------AHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
           D          HAE  AI           L    LY TL PC  CA AI  + I+++ Y
Sbjct: 66  DPLETKYLYVCHAEFNAILN----NGGRSLKGATLYATLFPCNECAKAIIQSGIQKVIY 120


>gi|255071429|ref|XP_002499388.1| hypothetical protein MICPUN_112644 [Micromonas sp. RCC299]
 gi|226514651|gb|ACO60647.1| hypothetical protein MICPUN_112644 [Micromonas sp. RCC299]
          Length = 353

 Score = 78.0 bits (192), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 38/208 (18%), Positives = 69/208 (33%), Gaps = 73/208 (35%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLN---NKIISRAGNRNRELK--------- 48
           MK+   +M   ++ A+     N     A+ V       +I+R  +  R  +         
Sbjct: 146 MKR---WMRSCIDVAREGGATN----AAIVVDPSGPGTVIARGLDETRAWRCVGRGNGHL 198

Query: 49  ----DVTAHAEILAIRMGCRI--------------------------------------- 65
                   H  ++AI    R                                        
Sbjct: 199 GGNGHPLRHCALVAIDDAARRDAETYPAGEDEKNGLSSAPEPTPPDRSEVGEKRRRGETL 258

Query: 66  --------LSQEIL-PEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQ- 115
                   L +  L    D Y+  EPC MCA A++ +R+RR+ +GA +P  G +  G   
Sbjct: 259 SASEMTETLGRPYLCTGYDAYLVREPCVMCAMALTHSRVRRVIFGAGSPGNGALGGGKHS 318

Query: 116 FYTLATCHHSPEIYP-GISEQRSRQIIQ 142
            +   T +H  ++Y  G+S +    +++
Sbjct: 319 LHGQRTLNHHYQVYTFGLSGEEMDNLVR 346


>gi|218673496|ref|ZP_03523165.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase protein
           [Rhizobium etli GR56]
          Length = 419

 Score = 78.0 bits (192), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 24/117 (20%), Positives = 40/117 (34%), Gaps = 19/117 (16%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC-- 83
           VG + V +   + +A            HAE  A+    ++           YVTLEPC  
Sbjct: 12  VGCLIVKDGVTVGQA----VTALGGRPHAEPQALAEAGQLA-----RGATAYVTLEPCSH 62

Query: 84  ----TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQR 136
                 CA A+  + + R+    ++P       G      A      E+  G+ +  
Sbjct: 63  HGKTPPCAEALIASGVARVVISVTDPDPRVSGRGVSMLRDAG----IEVDAGVLQAE 115


>gi|260904122|ref|ZP_05912444.1| riboflavin biosynthesis protein RibD [Brevibacterium linens BL2]
          Length = 359

 Score = 78.0 bits (192), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 34/139 (24%), Positives = 48/139 (34%), Gaps = 17/139 (12%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           MS AL+ A+N        VGA  +  +  I    +        + HAE+ AI     I  
Sbjct: 13  MSAALQAARNGHRGANPLVGAAILTRDSQIVVGHHA----GAGSPHAEVDAITTA--IDL 66

Query: 68  QEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
              L    L+VTLEPC        C  AI  A I  + +  S+  G     G        
Sbjct: 67  GVDLTASTLFVTLEPCNHIGRTGPCTQAIIDAGIPEVVFALSDSNGVAAGGGATLAEA-- 124

Query: 122 CHHSPEIYPGISEQRSRQI 140
                 +  G+    S  +
Sbjct: 125 ---GVRVRSGLGHDESSAL 140


>gi|88856442|ref|ZP_01131100.1| riboflavin-specific deaminase [marine actinobacterium PHSC20C1]
 gi|88814309|gb|EAR24173.1| riboflavin-specific deaminase [marine actinobacterium PHSC20C1]
          Length = 345

 Score = 78.0 bits (192), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 35/150 (23%), Positives = 57/150 (38%), Gaps = 26/150 (17%)

Query: 5   NVFMSCALEEAQNAALRNEIP-VGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMG 62
              M   L  A    +    P VG V V +  +I++   +        T HAE+ A+   
Sbjct: 11  EKLMLHGLSLASRGPITGGNPQVGCVLVNDAGEIVAEGWHH----GAGTPHAEVDALTKL 66

Query: 63  CRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP--KGGGIENGT 114
                      +   VTLEPC        C+ A+  A + R+ Y  S+P  + GG   G+
Sbjct: 67  G-----GNAAGLTAVVTLEPCNHHGRTGPCSEALIDAGVSRVVYAVSDPGVRSGG---GS 118

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
           Q    A      E+  G S+  + + +  +
Sbjct: 119 QRLRDAG----VEVIGGASQADAEEFLHSW 144


>gi|315636537|ref|ZP_07891773.1| riboflavin biosynthesis protein RibD [Arcobacter butzleri JV22]
 gi|315479186|gb|EFU69883.1| riboflavin biosynthesis protein RibD [Arcobacter butzleri JV22]
          Length = 334

 Score = 78.0 bits (192), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 35/176 (19%), Positives = 60/176 (34%), Gaps = 42/176 (23%)

Query: 1   MK-KGNVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIIS-RAGNRNRELKDVTAHAEI 56
           MK   N +M  A++EA    L       VG V V N ++++  A    +E      HAE+
Sbjct: 1   MKIDDNFYMRLAIDEAWKHQLLTYPNPAVGCVIVKNQRLLAVEAH---KEAGMP--HAEV 55

Query: 57  LAIRMG----------------------CRILSQEILPEVDLYVTLEPC------TMCAA 88
            A++                                  + ++YVTLEPC        CA 
Sbjct: 56  NALKTAYLKDNPNSILKTKNSSFDIHQFLLHNHNGFFNDCEIYVTLEPCNHIGKTPSCAN 115

Query: 89  AISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
            +   + +R+     +P                 + + ++  GI E+    +I  F
Sbjct: 116 LLKELKPKRVIISVKDPNKQATGGLETLK-----NENIDVTLGILEKDGLNLILPF 166


>gi|307297235|ref|ZP_07577041.1| CMP/dCMP deaminase zinc-binding [Thermotogales bacterium
           mesG1.Ag.4.2]
 gi|306916495|gb|EFN46877.1| CMP/dCMP deaminase zinc-binding [Thermotogales bacterium
           mesG1.Ag.4.2]
          Length = 168

 Score = 78.0 bits (192), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 31/127 (24%), Positives = 50/127 (39%), Gaps = 28/127 (22%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNR----------NRELKDVT-- 51
            + FM  A +  + ++      VGA+ V  N+I+S   N+             ++D    
Sbjct: 27  DSYFMRLAYQVRERSSCH-HRKVGALIVRENRILSTGYNQPPSGFPHCDETECIRDALGI 85

Query: 52  -----------AHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
                      AHAE  AI    +           +YVT  PC++CA  I  A I+R+ +
Sbjct: 86  PSGQNQEICYAAHAEQNAIAQAAKFGIATN--GSTIYVTHRPCSVCARLIINAGIKRVVF 143

Query: 101 --GASNP 105
             G  +P
Sbjct: 144 SEGYPDP 150


>gi|320169275|gb|EFW46174.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
          Length = 1344

 Score = 78.0 bits (192), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 34/151 (22%), Positives = 50/151 (33%), Gaps = 28/151 (18%)

Query: 2    KKGNVFMSCALEEAQNAALRNEIPV------GAVAVLNNKIISRAGNRNRELKDVTAHAE 55
                 +M+ A+++A  +     +PV      G V V N  ++S   +R         HAE
Sbjct: 1190 SNDWRYMAMAIQQANQS-----VPVETAYCVGCVIVQNGVVLSSGFSRELPGN---THAE 1241

Query: 56   ILAIRMGCRILSQEILPEVDLYVTLEPCTM-------CAAAISLARIRRLYYGASNPKGG 108
                    + L+ E      +Y T+EPCT        C   I   RI R+  G   P   
Sbjct: 1242 ----ECALKKLTPEQAQGATVYTTMEPCTTRLSGNVCCTDHIINNRIARVVIGVREPAEF 1297

Query: 109  GIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139
             +  G      A          G  E    Q
Sbjct: 1298 VVCIGIDRLEKAGI--QVTRLSG-LELECLQ 1325


>gi|254449430|ref|ZP_05062867.1| riboflavin biosynthesis protein RibD [Octadecabacter antarcticus
           238]
 gi|198263836|gb|EDY88106.1| riboflavin biosynthesis protein RibD [Octadecabacter antarcticus
           238]
          Length = 359

 Score = 78.0 bits (192), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 32/143 (22%), Positives = 44/143 (30%), Gaps = 27/143 (18%)

Query: 8   MSCALEEAQNAALR-NEIP-VGAVAVLN----NKIISRAGNRNRELKDVTAHAEILAIRM 61
           M  AL   +    R    P VG V V       ++I R             HAE  A+  
Sbjct: 1   MGMALSLGRRGLGRVWPNPNVGCVIVRPCENGGRVIGRGW----TADGGRPHAETRALD- 55

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
                          YVTLEPC        C  A+  A + R+     +P       G  
Sbjct: 56  ------SIDAAGATAYVTLEPCAHHAKTPPCVDALIAANVSRVVIATGDPDPRVAGKGIA 109

Query: 116 FYTLATCHHSPEIYPGISEQRSR 138
               A      ++  G+ E  +R
Sbjct: 110 ILRAAG----IDVMIGVREDEAR 128


>gi|299135084|ref|ZP_07028275.1| riboflavin biosynthesis protein RibD [Afipia sp. 1NLS2]
 gi|298590061|gb|EFI50265.1| riboflavin biosynthesis protein RibD [Afipia sp. 1NLS2]
          Length = 377

 Score = 78.0 bits (192), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 35/145 (24%), Positives = 52/145 (35%), Gaps = 21/145 (14%)

Query: 3   KGNVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           + + FM  AL   +    R      VGAV V +  I+ R   +         HAE +A++
Sbjct: 12  EDHRFMQLALALGRRGQGRTWPNPAVGAVVVKDGVILGRGWTQPGGR----PHAEPVALQ 67

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
              +           LYVTLEPC        CA AI  A I R+     +P       G 
Sbjct: 68  RAGKAA-----KGATLYVTLEPCSHHGKSPPCADAIIAAGIARVMSAIEDPNPEVAGQGH 122

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQ 139
                A      ++  G+    + +
Sbjct: 123 ARLRDAG----IQVDVGLYRDEAAR 143


>gi|288957859|ref|YP_003448200.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Azospirillum sp.
           B510]
 gi|288910167|dbj|BAI71656.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Azospirillum sp.
           B510]
          Length = 376

 Score = 78.0 bits (192), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 35/152 (23%), Positives = 49/152 (32%), Gaps = 18/152 (11%)

Query: 2   KKGNVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
           +     M  AL  A     R      VG V V +  +I R   +         HAE  A+
Sbjct: 8   ETDLRHMRAALALAGRGLGRTWPNPAVGCVLVRDGAVIGRGWTQPGGR----PHAETEAL 63

Query: 60  RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113
                            YVTLEPC        CA A+  AR+ R+     +P       G
Sbjct: 64  ARARACSGGA--EGATAYVTLEPCNHYGRTPPCALALVEARVARVVVACQDPDPRVAGGG 121

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
                 A       +  G+ E  +  + + FF
Sbjct: 122 LARLRDAG----IAVTTGLCEAEALALNEGFF 149


>gi|58427937|gb|AAW76974.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae
           KACC10331]
          Length = 316

 Score = 78.0 bits (192), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 34/149 (22%), Positives = 58/149 (38%), Gaps = 17/149 (11%)

Query: 10  CALEEAQ-NAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
            A++ ++ N    +  P GAV    +++II+ A NR        AHAE +A  +  + L 
Sbjct: 163 LAIKLSRMNVQEHSGGPFGAVVFGPDHRIIAAAVNRVVPQTTSLAHAENMAYMLAQQRLQ 222

Query: 68  QEILPEV----DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC- 122
              L  V     L  + +PC  C  A   A I RL  GA       +   TQF       
Sbjct: 223 TPRLNAVLSPITLATSAQPCCQCYGATVWAGIDRLLIGARADDVMAL---TQFDEGPLPA 279

Query: 123 -------HHSPEIYPGISEQRSRQIIQDF 144
                      E+   +   ++  +++++
Sbjct: 280 DWVGELTRRGIEVVRDVLRDQACAVLRNY 308


>gi|326384274|ref|ZP_08205956.1| CMP/dCMP deaminase zinc-binding protein [Gordonia neofelifaecis
           NRRL B-59395]
 gi|326197139|gb|EGD54331.1| CMP/dCMP deaminase zinc-binding protein [Gordonia neofelifaecis
           NRRL B-59395]
          Length = 148

 Score = 78.0 bits (192), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 26/110 (23%), Positives = 45/110 (40%), Gaps = 2/110 (1%)

Query: 12  LEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEI 70
           +  A+ A    + P G++ V     +     NR     D T H E    R   + L++E 
Sbjct: 1   MSLAREALDEGDQPFGSLVVDAAGDVRFADRNRV-SGGDHTRHPEFAIARWAAKNLTEEQ 59

Query: 71  LPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
             +  +Y + E C MC+AA +   + R+ Y AS  +    +   +  T  
Sbjct: 60  RAQATVYTSGEHCPMCSAAHAWVGLGRIVYAASAEQLTAWQTAWELPTAP 109


>gi|194333660|ref|YP_002015520.1| CMP/dCMP deaminase [Prosthecochloris aestuarii DSM 271]
 gi|194311478|gb|ACF45873.1| CMP/dCMP deaminase zinc-binding [Prosthecochloris aestuarii DSM
           271]
          Length = 174

 Score = 78.0 bits (192), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 32/121 (26%), Positives = 43/121 (35%), Gaps = 27/121 (22%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGN--------------------- 42
              FMS A   A+ A       +GAV V +N I+S   N                     
Sbjct: 29  HEYFMSVAHLIAKRATCTRGH-IGAVVVRDNNILSTGYNGAPSGLPHCNETNCKIYRSVH 87

Query: 43  ---RNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLY 99
                 E    T HAEI AI    +      + + D+Y+T  PC  C   +    IR +Y
Sbjct: 88  PDGTVEENCVNTIHAEINAIAQAAKHGVS--IKDADIYITASPCIHCLKVLINVGIRTIY 145

Query: 100 Y 100
           Y
Sbjct: 146 Y 146


>gi|333028400|ref|ZP_08456464.1| putative riboflavin/cytosine deaminase [Streptomyces sp. Tu6071]
 gi|332748252|gb|EGJ78693.1| putative riboflavin/cytosine deaminase [Streptomyces sp. Tu6071]
          Length = 372

 Score = 77.6 bits (191), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 30/142 (21%), Positives = 51/142 (35%), Gaps = 25/142 (17%)

Query: 8   MSCALEEAQNAALR---NEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
           M  A+  A     R   N + VG V +  + ++  R  ++         HAEI A+R   
Sbjct: 18  MREAIALAARGLGRTRPNPV-VGCVVLDASGEVAGRGWHQRAGG----PHAEIHALRAAG 72

Query: 64  RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFY 117
                E        VTLEPC        C+ A+  A +RR+ +  ++P            
Sbjct: 73  -----ERARGGTALVTLEPCDHTGRTGPCSRALIEAGVRRVVHAVADPTDQATGGADTLR 127

Query: 118 TLATCHHSPEIYPGISEQRSRQ 139
                    ++  G+ E+ +  
Sbjct: 128 AA-----GVDVEHGLLEREAAD 144


>gi|315503254|ref|YP_004082141.1| riboflavin biosynthesis protein ribd [Micromonospora sp. L5]
 gi|315409873|gb|ADU07990.1| riboflavin biosynthesis protein RibD [Micromonospora sp. L5]
          Length = 353

 Score = 77.6 bits (191), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 27/142 (19%), Positives = 46/142 (32%), Gaps = 25/142 (17%)

Query: 8   MSCALEEAQN---AALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
           M  A+E A     A   N + VG V +  + +++    +          HAEI+A+    
Sbjct: 10  MRRAIELAARGLGATSPNPV-VGCVLLDTDGEVVGEGFHAYAGG----PHAEIVALAQAG 64

Query: 64  RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFY 117
                         VTLEPC        C+ A+  A + R+     +P            
Sbjct: 65  -----TRARGGTAVVTLEPCDHTGRTGPCSHALIAAGVSRVVIAVPDPNPVASGGAATLR 119

Query: 118 TLATCHHSPEIYPGISEQRSRQ 139
                    ++  G+  Q +  
Sbjct: 120 AA-----GVQVALGVRAQEAEA 136


>gi|255084043|ref|XP_002508596.1| ytidine and deoxycytidylated deaminase zinc-binding protein
           [Micromonas sp. RCC299]
 gi|226523873|gb|ACO69854.1| ytidine and deoxycytidylated deaminase zinc-binding protein
           [Micromonas sp. RCC299]
          Length = 443

 Score = 77.6 bits (191), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 32/125 (25%), Positives = 47/125 (37%), Gaps = 33/125 (26%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKII-SRAGN-------------- 42
           +K  + FMS A   AQ +      P   VGAV V  +++I     N              
Sbjct: 153 LKWDDYFMSVAFLSAQRSKD----PNKQVGAVIVGPDRVIMGVGYNGFPRGCSDSDLPWA 208

Query: 43  RNRELKDV-------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARI 95
           +     +          HAE+ AI       + + L    +YVT+ PC  CA  I  + I
Sbjct: 209 KKSTNGNPMETKYAYVCHAEMNAIMN----KNSQSLHGATVYVTMYPCNECAKLIIQSGI 264

Query: 96  RRLYY 100
           R + Y
Sbjct: 265 REVVY 269


>gi|327393622|dbj|BAK11044.1| diaminohydroxyphosphoribosulpyrimidine deaminase ribD [Pantoea
           ananatis AJ13355]
          Length = 124

 Score = 77.6 bits (191), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 24/87 (27%), Positives = 39/87 (44%), Gaps = 15/87 (17%)

Query: 25  PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC- 83
           PVG V V + +++++   +         HAEI AI           + E ++YVTLEPC 
Sbjct: 6   PVGCVIVHDGEVVAKGFTQPPGQH----HAEIDAI-----AKLTFPISECEIYVTLEPCS 56

Query: 84  -----TMCAAAISLARIRRLYYGASNP 105
                  CA  I+  + + +Y    +P
Sbjct: 57  FQGRTPSCALTIAELKPKHIYIAMDDP 83


>gi|300743929|ref|ZP_07072949.1| guanine deaminase [Rothia dentocariosa M567]
 gi|300380290|gb|EFJ76853.1| guanine deaminase [Rothia dentocariosa M567]
          Length = 163

 Score = 77.6 bits (191), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 26/109 (23%), Positives = 39/109 (35%), Gaps = 1/109 (0%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIIS-RAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  A+ +         +P   V V +   +S    NR  E  D +AHAE++A+R     L
Sbjct: 11  MVEAVHQCIQHVDSGGLPFVGVVVQSGVAVSNFGFNRVYETGDASAHAEVVAMRDAMSRL 70

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
               L    L  T EPC +C        +  +Y  A   +         
Sbjct: 71  KCSDLSGTVLLATGEPCGLCYRFAQNCGVDAIYVAADREEAASWGFDYH 119


>gi|25027211|ref|NP_737265.1| hypothetical protein CE0655 [Corynebacterium efficiens YS-314]
 gi|259506652|ref|ZP_05749554.1| cytidine/deoxycytidylate deaminase [Corynebacterium efficiens
           YS-314]
 gi|23492492|dbj|BAC17465.1| conserved hypothetical protein [Corynebacterium efficiens YS-314]
 gi|259165736|gb|EEW50290.1| cytidine/deoxycytidylate deaminase [Corynebacterium efficiens
           YS-314]
          Length = 159

 Score = 77.6 bits (191), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 24/100 (24%), Positives = 43/100 (43%), Gaps = 2/100 (2%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIR 60
           +    +++ ++  A  A  +   P G+V V +  +++    NR     D T H E    R
Sbjct: 4   ETDMFYLNRSVALAAIALDKGNSPYGSVLVADTGQVLFEDHNR-DGNGDDTRHPEFEIAR 62

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
                L+ +      +Y + E C MCAAA +   + R+ Y
Sbjct: 63  WAATNLTADQRAISVVYTSTEHCPMCAAAHAWVGLGRIIY 102


>gi|281419672|ref|ZP_06250671.1| cytidine/deoxycytidylate deaminase family protein [Prevotella copri
           DSM 18205]
 gi|281406201|gb|EFB36881.1| cytidine/deoxycytidylate deaminase family protein [Prevotella copri
           DSM 18205]
          Length = 150

 Score = 77.6 bits (191), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 33/111 (29%), Positives = 45/111 (40%), Gaps = 14/111 (12%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGN-------RNRELKDVT--- 51
           K    ++  A   A+N+  +    VGA+ V +  IIS   N          E  +VT   
Sbjct: 10  KLDLRYLRMARIWAENSYCKR-RQVGALVVKDKMIISDGYNGTPSGFENVCEDNNVTKPY 68

Query: 52  -AHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
             HAE  AI    R  +        LYVT  PC  CA  I  + I+R+ Y 
Sbjct: 69  VLHAEANAITKLARSSNNS--EGSTLYVTASPCIECAKLIIQSGIKRVVYA 117


>gi|108799353|ref|YP_639550.1| riboflavin biosynthesis protein RibD [Mycobacterium sp. MCS]
 gi|119868469|ref|YP_938421.1| riboflavin biosynthesis protein RibD [Mycobacterium sp. KMS]
 gi|126435011|ref|YP_001070702.1| riboflavin biosynthesis protein RibD [Mycobacterium sp. JLS]
 gi|108769772|gb|ABG08494.1| riboflavin biosynthesis protein RibD [Mycobacterium sp. MCS]
 gi|119694558|gb|ABL91631.1| riboflavin biosynthesis protein RibD [Mycobacterium sp. KMS]
 gi|126234811|gb|ABN98211.1| riboflavin biosynthesis protein RibD [Mycobacterium sp. JLS]
          Length = 333

 Score = 77.6 bits (191), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 28/152 (18%), Positives = 54/152 (35%), Gaps = 24/152 (15%)

Query: 8   MSCALEEAQ--NAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           M+ A+E+A           PVGAV +  + ++      +         HAE++A+R   R
Sbjct: 7   MALAVEQADRVKGGTYPNPPVGAVILDADGEVAGVGATQPPGG----PHAEVMALRRAGR 62

Query: 65  ILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
                        VTLEPC        C  A+  A +  + Y   +P         +   
Sbjct: 63  KA-----AGGTAVVTLEPCNHHGRTPPCVDALLAAEVSAVVYAVPDPNPVAAGGAARLGE 117

Query: 119 LATCHHSPEIYPGISEQR-SRQIIQDFFKERR 149
                    +  G+     +  +++++  ++R
Sbjct: 118 S-----GVTVTAGVLGDAVAGGVLREWLHKQR 144


>gi|54025280|ref|YP_119522.1| putative pyrimidine deaminase [Nocardia farcinica IFM 10152]
 gi|54016788|dbj|BAD58158.1| putative pyrimidine deaminase [Nocardia farcinica IFM 10152]
          Length = 149

 Score = 77.6 bits (191), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 29/114 (25%), Positives = 42/114 (36%), Gaps = 14/114 (12%)

Query: 1   MKKGNVFMSCALEEAQNA-ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
           M   + +M+ A+E A+          VGAV V +   I+   +R  +LK    HAE  A+
Sbjct: 1   MTTDHHWMNRAIELARRCPPAPGAFSVGAVIVADGIEIASGYSRETDLK---VHAEEAAL 57

Query: 60  RMGCRILSQEILPEVDLYVTLEPC--------TMCAAAISLARIRRLYYGASNP 105
                      L    +Y TLEPC          C   +    I R+      P
Sbjct: 58  DKL--DPHDPRLSRATIYSTLEPCSERATTTRLPCTDRVLAVGIPRVVIAWREP 109


>gi|291299218|ref|YP_003510496.1| CMP/dCMP deaminase zinc-binding protein [Stackebrandtia nassauensis
           DSM 44728]
 gi|290568438|gb|ADD41403.1| CMP/dCMP deaminase zinc-binding protein [Stackebrandtia nassauensis
           DSM 44728]
          Length = 163

 Score = 77.6 bits (191), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 23/102 (22%), Positives = 42/102 (41%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           +     +   ++ A+ A    + P G++ V    ++ R         D T H E    + 
Sbjct: 8   ETDRQHLRRCVDLAREALDAGDDPFGSLLVDGAGVVRREERNRERSVDATCHPEFALAKW 67

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
               LS +   +  +Y + E C MC+AA +   + R+ Y AS
Sbjct: 68  AGANLSPDERRDSVVYTSGEHCPMCSAAHAWVGLGRIVYVAS 109


>gi|317154550|ref|YP_004122598.1| CMP/dCMP deaminase zinc-binding protein [Desulfovibrio aespoeensis
           Aspo-2]
 gi|316944801|gb|ADU63852.1| CMP/dCMP deaminase zinc-binding protein [Desulfovibrio aespoeensis
           Aspo-2]
          Length = 176

 Score = 77.6 bits (191), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 27/88 (30%), Positives = 37/88 (42%), Gaps = 3/88 (3%)

Query: 22  NEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQE--ILPEVDLYV 78
            E P GAV    +  ++          +D T HAE +     CR    +        LY 
Sbjct: 33  GEGPFGAVVAGPDGMVVMTQQAETIATQDHTRHAEAVLASRFCRAHYDDPAFRAGSTLYS 92

Query: 79  TLEPCTMCAAAISLARIRRLYYGASNPK 106
           ++EPC MC  A+  A I RL YG S  +
Sbjct: 93  SMEPCAMCMFAMFKAGIGRLVYGLSAER 120


>gi|84496639|ref|ZP_00995493.1| riboflavin biosynthesis protein RibD [Janibacter sp. HTCC2649]
 gi|84383407|gb|EAP99288.1| riboflavin biosynthesis protein RibD [Janibacter sp. HTCC2649]
          Length = 341

 Score = 77.6 bits (191), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 29/156 (18%), Positives = 49/156 (31%), Gaps = 22/156 (14%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIP-VGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAI 59
                +M  AL         +  P VG V V  +  +++   ++       T HA     
Sbjct: 6   TTDEQWMLRALVVGAFGPESDANPRVGCVLVDPDGALVAEGWHQ----GAGTPHA----- 56

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENG 113
                  + E       YVTLEPC        C+ A++ A + R+ Y  S+P        
Sbjct: 57  EAAALAAAGERAKGCTAYVTLEPCNHTGRTEPCSHALAAAGVSRVVYAVSDPNASAAGGA 116

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
                            G+ E  +  + + +    R
Sbjct: 117 AWLAE-----RGVATEGGLLEAEATALNRSWLHRIR 147


>gi|270263547|ref|ZP_06191816.1| hypothetical protein SOD_e01710 [Serratia odorifera 4Rx13]
 gi|270042431|gb|EFA15526.1| hypothetical protein SOD_e01710 [Serratia odorifera 4Rx13]
          Length = 369

 Score = 77.6 bits (191), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 36/157 (22%), Positives = 54/157 (34%), Gaps = 21/157 (13%)

Query: 1   MKKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           M     +M+ A E A+         P VG V V + +I+    +          HAE+ A
Sbjct: 1   MHNDEFYMARAFELARLGRFTTAPNPNVGCVIVRDGEIVGEGYHLRAGE----PHAEVHA 56

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
           +RM               YVTLEPC        CA A+  A + R+     +P       
Sbjct: 57  LRMAGARARGAT-----AYVTLEPCSHHGRTPPCADALVAAGVARVVAAMQDPNPEVAGR 111

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
           G      A      ++  G+    +  +   F K  R
Sbjct: 112 GLYKLQQAG----IDVRHGLMLSDAEAVNPGFLKRMR 144


>gi|297155739|gb|ADI05451.1| putative riboflavin/cytosine deaminase [Streptomyces
           bingchenggensis BCW-1]
          Length = 378

 Score = 77.6 bits (191), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 30/152 (19%), Positives = 50/152 (32%), Gaps = 25/152 (16%)

Query: 8   MSCALEEAQNAALR---NEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
           M  A+  A         N + VG V +  + +      ++         HAE+ A+R   
Sbjct: 10  MRRAIALAARGLGHTSPNPV-VGCVILDADGRTAGEGWHQRAGG----PHAEVHALRAAG 64

Query: 64  RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFY 117
                E        VTLEPC        CA A+  A I R+ Y  ++P            
Sbjct: 65  -----ERARGGTAVVTLEPCNHTGRTGPCAQALLDAGIVRVVYAVADPNAKAAGGAATLA 119

Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
              T      +  G+   ++  + + +    R
Sbjct: 120 AAGTA-----VESGLLADQAAAVNEAWLTSMR 146


>gi|38233905|ref|NP_939672.1| putative riboflavin biosynthesis protein [Corynebacterium
           diphtheriae NCTC 13129]
 gi|38200166|emb|CAE49847.1| Putative riboflavin biosynthesis protein [Corynebacterium
           diphtheriae]
          Length = 334

 Score = 77.6 bits (191), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 34/112 (30%), Positives = 47/112 (41%), Gaps = 22/112 (19%)

Query: 11  ALEEAQNAA--LRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           A++E + A        PVGAV +  N  I+ R   +        +HAEI+A+R       
Sbjct: 11  AVQEGEKAWGTTHPNPPVGAVVLSSNGSIVGRGHTQPPGG----SHAEIMALRQAG---- 62

Query: 68  QEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASN----PKGGG 109
            E      L VTLEPC        C+ AIS + I  + Y   +     KGG 
Sbjct: 63  -ENTKGGTLVVTLEPCNHWGRTGPCSHAISESGIEHVVYLMQDTGSLEKGGA 113


>gi|302866839|ref|YP_003835476.1| riboflavin biosynthesis protein RibD [Micromonospora aurantiaca
           ATCC 27029]
 gi|302569698|gb|ADL45900.1| riboflavin biosynthesis protein RibD [Micromonospora aurantiaca
           ATCC 27029]
          Length = 353

 Score = 77.3 bits (190), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 27/142 (19%), Positives = 46/142 (32%), Gaps = 25/142 (17%)

Query: 8   MSCALEEAQN---AALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
           M  A+E A     A   N + VG V +  + +++    +          HAEI+A+    
Sbjct: 10  MRRAIELAVRGLGATSPNPV-VGCVLLDTDGEVVGEGFHAYAGG----PHAEIVALAQAG 64

Query: 64  RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFY 117
                         VTLEPC        C+ A+  A + R+     +P            
Sbjct: 65  -----TRARGGTAVVTLEPCDHTGRTGPCSHALIAAGVSRVVIAVPDPNPVASGGAATLR 119

Query: 118 TLATCHHSPEIYPGISEQRSRQ 139
                    ++  G+  Q +  
Sbjct: 120 AA-----GVQVALGVRAQEAEA 136


>gi|313205464|ref|YP_004044121.1| cmp/dcmp deaminase zinc-binding protein [Paludibacter
           propionicigenes WB4]
 gi|312444780|gb|ADQ81136.1| CMP/dCMP deaminase zinc-binding protein [Paludibacter
           propionicigenes WB4]
          Length = 141

 Score = 77.3 bits (190), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 35/110 (31%), Positives = 45/110 (40%), Gaps = 15/110 (13%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRN--------RELKDVT---- 51
            N +M  A   A+N+       VGA+ V N  IIS   N           +  +V+    
Sbjct: 9   DNRYMRMARIWAENSYCERRK-VGALLVKNQMIISDGYNGTPSGFENKCEDENNVSKPYV 67

Query: 52  AHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
            HAE  AI    R  +        LYVT  PC  CA  I  A I+R+ YG
Sbjct: 68  LHAEANAISKIARSHNSSD--NATLYVTASPCIECAKLIIQAGIKRVVYG 115


>gi|85706317|ref|ZP_01037411.1| riboflavin biosynthesis protein RibD [Roseovarius sp. 217]
 gi|85669090|gb|EAQ23957.1| riboflavin biosynthesis protein RibD [Roseovarius sp. 217]
          Length = 364

 Score = 77.3 bits (190), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 31/149 (20%), Positives = 46/149 (30%), Gaps = 21/149 (14%)

Query: 4   GNVFMSCALEEAQNAALR--NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
              FM+ AL   +    +      VG V V    I+ R             HAE  A+  
Sbjct: 5   DARFMALALSLGRRGMGQCAPNPAVGCVIVQGRHIVGRGWTAPGGR----PHAETQALAQ 60

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
              +           YV+LEPC        CA A+  A I R+     +        G  
Sbjct: 61  AGDLA-----RGATAYVSLEPCAHHGKTPPCADALIAAGITRVVAPFDDNDPRVAGRGFA 115

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDF 144
               A      E+  G+    + + +  F
Sbjct: 116 RLRAAG----IEVRTGVLADVAGRDLAGF 140


>gi|152964097|ref|YP_001359881.1| riboflavin biosynthesis protein RibD [Kineococcus radiotolerans
           SRS30216]
 gi|151358614|gb|ABS01617.1| riboflavin biosynthesis protein RibD [Kineococcus radiotolerans
           SRS30216]
          Length = 338

 Score = 77.3 bits (190), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 26/147 (17%), Positives = 50/147 (34%), Gaps = 25/147 (17%)

Query: 8   MSCALEEAQNAALR---NEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGC 63
           M+ A+  A         N + VG V +    ++     +          HAE+ A+    
Sbjct: 7   MARAVALAARGLGTTSPNPV-VGCVVLDAAGEVAGEGWHERAGG----PHAEVNALAAAG 61

Query: 64  RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFY 117
                +       YVTLEPC        C  A+  A I R+ +  ++P         +  
Sbjct: 62  -----DRARGGTAYVTLEPCNHTGRTGPCVQALLRAGIARVVFAVADPGALAGGGARELR 116

Query: 118 TLATCHHSPEIYPGISEQRSRQIIQDF 144
                    E+  G+  + + ++ + +
Sbjct: 117 AA-----GVEVVAGVLAEEAERVNEAW 138


>gi|301093219|ref|XP_002997458.1| conserved hypothetical protein [Phytophthora infestans T30-4]
 gi|262110714|gb|EEY68766.1| conserved hypothetical protein [Phytophthora infestans T30-4]
          Length = 149

 Score = 77.3 bits (190), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 33/151 (21%), Positives = 49/151 (32%), Gaps = 29/151 (19%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIP------VGAVAVLNNKIISRAGNRNRELKDVTAHAE 55
           +    FM  A+ EA  +      P      VG V V +  ++S   +R         HAE
Sbjct: 6   ESDVAFMRLAVAEAHRSQ-----PSENAYCVGCVVVRDGLVLSTGFSRELPGN---THAE 57

Query: 56  ILAIRMGCRILSQEILPEVDLYVTLEPC-------TMCAAAISLARIRRLYYGASNPKGG 108
            +A+                +Y T+EPC         C  +   A + R+  G   PK  
Sbjct: 58  QVAL-----HKLNFEAQGATVYTTMEPCSTRVSGNVPCVQSCLRAGVARVVIGVMEPKTF 112

Query: 109 GIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139
            I  G Q    A      ++  G  E     
Sbjct: 113 VICKGVQLLQEARVD--VKLLKG-LEADCLA 140


>gi|323344020|ref|ZP_08084246.1| cytidine/deoxycytidylate deaminase [Prevotella oralis ATCC 33269]
 gi|323094749|gb|EFZ37324.1| cytidine/deoxycytidylate deaminase [Prevotella oralis ATCC 33269]
          Length = 148

 Score = 77.3 bits (190), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 34/112 (30%), Positives = 45/112 (40%), Gaps = 15/112 (13%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRN--------RELKDVT-- 51
           K    ++  A   A+N+  +    VGA+ V N  IIS   N           +   +T  
Sbjct: 10  KLDLRYLRMARVWAENSYCKR-RQVGALVVKNKMIISDGYNGTPSGFENVCEDENSITKP 68

Query: 52  --AHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
              HAE  AI    R  +        LYVT  PC  CA  I  A I+R+ YG
Sbjct: 69  YVLHAEANAITKLARSSNNSD--GSTLYVTASPCIECAKLIIQAGIKRVVYG 118


>gi|260939908|ref|XP_002614254.1| hypothetical protein CLUG_05740 [Clavispora lusitaniae ATCC 42720]
 gi|238852148|gb|EEQ41612.1| hypothetical protein CLUG_05740 [Clavispora lusitaniae ATCC 42720]
          Length = 109

 Score = 77.3 bits (190), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 21/106 (19%), Positives = 44/106 (41%), Gaps = 10/106 (9%)

Query: 43  RNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGA 102
              +    T H EI  +    R+    +     +Y TL PC MC+ A  +  ++R+  G 
Sbjct: 1   MRIQKNSATLHGEISTLENAGRLPGG-VYKNCTMYTTLSPCHMCSGACLMYGVKRVVLG- 58

Query: 103 SNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKER 148
            N    G E   +   +   +        +++++ ++++  F +ER
Sbjct: 59  ENENFVGAEKLLESMGVEVVN--------MNDEKCKELMSRFIRER 96


>gi|331701117|ref|YP_004398076.1| ComE operon protein 2 [Lactobacillus buchneri NRRL B-30929]
 gi|329128460|gb|AEB73013.1| ComE operon protein 2 [Lactobacillus buchneri NRRL B-30929]
          Length = 158

 Score = 77.3 bits (190), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 29/115 (25%), Positives = 44/115 (38%), Gaps = 18/115 (15%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKD----------- 49
           +K    FM  A+  A  +     + VGAV V + +II+   N +    D           
Sbjct: 5   IKWDQYFMMQAVLLASRSTCER-LSVGAVIVRDKRIIAGGYNGSVAGDDHCIDVGCYLED 63

Query: 50  ----VTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
                T HAE+ AI    +          ++YVT  PC  C   +  A I ++ Y
Sbjct: 64  GHCVRTIHAEMNAILQCAKFGESTD--NAEIYVTDFPCLQCTKMLLQAGITKINY 116


>gi|54024974|ref|YP_119216.1| putative cytidine/deoxycytidylate deaminase [Nocardia farcinica IFM
           10152]
 gi|54016482|dbj|BAD57852.1| putative cytidine/deoxycytidylate deaminase [Nocardia farcinica IFM
           10152]
          Length = 202

 Score = 77.3 bits (190), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 30/151 (19%), Positives = 52/151 (34%), Gaps = 15/151 (9%)

Query: 9   SCAL--EEAQNAALRN-EIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
             AL    A          P  A+ V   + +++S   N         AHAE+ A+ +  
Sbjct: 35  RMALVHRLAARNPREGAGGPFAALVVDSRSGEVVSAGVNLVLSSGLSVAHAEVTALSLAQ 94

Query: 64  RILSQEILPEVD-----LYVTLEPCTMCAAAISLARIRRLYYGASNPK----GGGIENGT 114
             +    L   D     L V   PC  C  A+  + ++RL      P+     G  E   
Sbjct: 95  TRVRAWDLGAADAPQRELVVNWRPCAQCYGAVLWSGVKRLVVAGEGPEVEQLTGFDEGPM 154

Query: 115 QFYTLATCHHS-PEIYPGISEQRSRQIIQDF 144
           +    A       E+  G+  +++  +  +F
Sbjct: 155 REDWAAQLRRRGIEVVVGVLREQALDVFAEF 185


>gi|222148205|ref|YP_002549162.1| bifunctional riboflavin deaminase-reductase [Agrobacterium vitis
           S4]
 gi|221735193|gb|ACM36156.1| bifunctional riboflavin deaminase-reductase [Agrobacterium vitis
           S4]
          Length = 366

 Score = 76.9 bits (189), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 34/144 (23%), Positives = 49/144 (34%), Gaps = 21/144 (14%)

Query: 3   KGNVFMSCALEEAQ--NAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
               FM+ A+   +           VG V V +  I+  A            HAE  AI 
Sbjct: 7   DDQRFMAAAIRLGRSHLGQTLTNPSVGCVIVADGTIVGSA----VTAIGGRPHAERQAIA 62

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           +               YVTLEPC        CA A+  A + R+    ++P       G 
Sbjct: 63  VAGEKA-----RGATAYVTLEPCSHHGKTPPCADALVEAGVARVVVAVTDPDPRVSGRGL 117

Query: 115 QFYTLATCHHSPEIYPGISEQRSR 138
              T A      E+  G+ E+ +R
Sbjct: 118 SILTDAG----IEVVTGVLEREAR 137


>gi|157736310|ref|YP_001488993.1| dCMP deaminase, putative [Arcobacter butzleri RM4018]
 gi|315635442|ref|ZP_07890708.1| CMP/dCMP deaminase [Arcobacter butzleri JV22]
 gi|157698164|gb|ABV66324.1| dCMP deaminase, putative [Arcobacter butzleri RM4018]
 gi|315480200|gb|EFU70867.1| CMP/dCMP deaminase [Arcobacter butzleri JV22]
          Length = 147

 Score = 76.9 bits (189), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 32/122 (26%), Positives = 48/122 (39%), Gaps = 27/122 (22%)

Query: 1   MKKGNVFMSCA--LEEAQNAALRNEIPVGAVAVLNNKIISRAGNRN-------------R 45
           M     F++ A  +  A     +    VGAV V + +I+S   N                
Sbjct: 1   MLNDRSFINIAKEIALASKCVSKQ---VGAVIVKDGRILSTGYNGTPAGYINCSEHWKGE 57

Query: 46  ELKD-----VTA--HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98
             KD      T   HAE+ AI    R      +    +YVTLEPC+ C+  +  + I+R+
Sbjct: 58  YTKDHHEWSKTYEIHAEMNAIIWAARKGIS--IEGGTIYVTLEPCSECSKNLIASGIKRI 115

Query: 99  YY 100
            Y
Sbjct: 116 VY 117


>gi|312869046|ref|ZP_07729223.1| ComE operon protein 2 [Lactobacillus oris PB013-T2-3]
 gi|311095472|gb|EFQ53739.1| ComE operon protein 2 [Lactobacillus oris PB013-T2-3]
          Length = 163

 Score = 76.9 bits (189), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 33/119 (27%), Positives = 45/119 (37%), Gaps = 22/119 (18%)

Query: 1   MKK----GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKD------- 49
           MKK       FM  A   A  +  +  + VGAV V + +II+   N +    D       
Sbjct: 1   MKKRIDWDQYFMVQAALLASRSTCKR-LSVGAVLVRDKRIIAGGYNGSVSGDDHCIDEGC 59

Query: 50  --------VTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
                    T HAE+ AI    R           LYVT  PC  C  ++  A I+ + Y
Sbjct: 60  YLRDGHCVRTIHAEMNAILQCARFGMSTD--GASLYVTDFPCLQCTKSLLQAGIKEINY 116


>gi|300788900|ref|YP_003769191.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Amycolatopsis
           mediterranei U32]
 gi|299798414|gb|ADJ48789.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Amycolatopsis
           mediterranei U32]
          Length = 363

 Score = 76.9 bits (189), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 28/129 (21%), Positives = 46/129 (35%), Gaps = 15/129 (11%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +  A+  A      +   VGAV    + ++++   +      D   HAE  A+    +  
Sbjct: 226 LKEAIALAAECPPSHTFRVGAVITDADGEVVATGHS---GEGDPGNHAEEAAL---AKCG 279

Query: 67  SQEILPEVDLYVTLEPCTM-------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
               L    +Y +LEPC+        C   I  A I R+ +    P       GT+    
Sbjct: 280 GDPRLAGATMYSSLEPCSHRSSHPRSCTQLILDAGIPRVVFAWREPPVFVDARGTELLRQ 339

Query: 120 ATCHHSPEI 128
           A   H  E+
Sbjct: 340 AG-RHVVEV 347


>gi|11499353|ref|NP_070592.1| dCMP deaminase, putative [Archaeoglobus fulgidus DSM 4304]
 gi|2648787|gb|AAB89487.1| dCMP deaminase, putative [Archaeoglobus fulgidus DSM 4304]
          Length = 157

 Score = 76.9 bits (189), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 37/148 (25%), Positives = 52/148 (35%), Gaps = 35/148 (23%)

Query: 1   MKK---GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGN--------------- 42
           MK+      FM  A   A+ +    +  VGAV V + +I++   N               
Sbjct: 1   MKRPTLDEYFMEIASVVAKRSTCLRQH-VGAVIVKDKRILATGYNGAPSGLPHCEEVGCL 59

Query: 43  ---------RNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLA 93
                      +EL     HAE  AI    +      +    LY T  PC  CA  I  A
Sbjct: 60  RDRMSVPSGERQELCRGV-HAEQNAIIQAAKFGIS--VDGGTLYSTHCPCITCAKIIINA 116

Query: 94  RIRRLYYGASNPKGGGIENGTQFYTLAT 121
            I+R+ YG    K    +NG +    A 
Sbjct: 117 GIKRVVYG----KEYADKNGLKLLEEAG 140


>gi|269956518|ref|YP_003326307.1| riboflavin biosynthesis protein RibD [Xylanimonas cellulosilytica
           DSM 15894]
 gi|269305199|gb|ACZ30749.1| riboflavin biosynthesis protein RibD [Xylanimonas cellulosilytica
           DSM 15894]
          Length = 350

 Score = 76.9 bits (189), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 30/141 (21%), Positives = 45/141 (31%), Gaps = 19/141 (13%)

Query: 8   MSCALEEAQNAALRNEIP-VGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M  AL  A         P VG V +  +  +I    +R       T HAE+ A+      
Sbjct: 16  MDRALTLAARGPAHGPNPRVGCVLLAPDGTVIGEGWHR----GAGTPHAEVAALHDAHTR 71

Query: 66  LSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
                       VTLEPC        CA A+  A I  + +   +P G     G      
Sbjct: 72  GCDPR--GATAVVTLEPCNHTGRTGPCAQALVDAGITDVVHAIDDP-GARSGGGADHLRA 128

Query: 120 ATCHHSPEIYPGISEQRSRQI 140
               H   +   +    + ++
Sbjct: 129 ----HGIRVTSEVRAAAALEL 145


>gi|307326834|ref|ZP_07606026.1| riboflavin biosynthesis protein RibD [Streptomyces violaceusniger
           Tu 4113]
 gi|306887597|gb|EFN18591.1| riboflavin biosynthesis protein RibD [Streptomyces violaceusniger
           Tu 4113]
          Length = 369

 Score = 76.9 bits (189), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 27/142 (19%), Positives = 47/142 (33%), Gaps = 25/142 (17%)

Query: 8   MSCALEEAQNAALR---NEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
           M  A+  A         N + VG V +    +++    ++         HAE+ A+R   
Sbjct: 10  MRHAVALAARGLGHTSPNPV-VGCVILDAGGRVVGEGWHQRAGG----PHAEVHALRAAG 64

Query: 64  RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFY 117
                +        VTLEPC        C+ A+  A I R++Y   +P            
Sbjct: 65  -----DRARGGTALVTLEPCDHTGRTGPCSQALIAAGIARVHYAVGDPTAQARGGAATLA 119

Query: 118 TLATCHHSPEIYPGISEQRSRQ 139
                    E+  G+  + +  
Sbjct: 120 AAG-----VEVEAGLLAEEAEA 136


>gi|168465506|ref|ZP_02699388.1| riboflavin biosynthesis protein RibD [Salmonella enterica subsp.
           enterica serovar Newport str. SL317]
 gi|195631795|gb|EDX50315.1| riboflavin biosynthesis protein RibD [Salmonella enterica subsp.
           enterica serovar Newport str. SL317]
          Length = 367

 Score = 76.9 bits (189), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 36/155 (23%), Positives = 53/155 (34%), Gaps = 21/155 (13%)

Query: 3   KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +   +M+ AL+ AQ      +  P VG V V N  I+    +          HAE+ A+R
Sbjct: 2   QDEFYMARALKLAQRGRFTTHPNPNVGCVIVNNGDIVGEGYHHRAGE----PHAEVHALR 57

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           M               YVTLEPC        C  A+  A + R+     +P       G 
Sbjct: 58  MAGAKAKGAT-----AYVTLEPCSHHGRTPPCCDALIAAGVARVVAAMQDPNPQVAGRGL 112

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
                A       +  G+       + + F K  R
Sbjct: 113 YRLQQAG----IAVSHGLMMSEVEALNKGFLKRMR 143


>gi|281204851|gb|EFA79046.1| hypothetical protein PPL_08516 [Polysphondylium pallidum PN500]
          Length = 246

 Score = 76.9 bits (189), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 33/122 (27%), Positives = 45/122 (36%), Gaps = 16/122 (13%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLN--NKIISRAGNRNRELKDVTAHAEILAIR 60
           +   +M  AL  A    L  E P GA+ V +  N I     N      +V +H EI A  
Sbjct: 44  RDECYMRIAL--AFGVTLNRERPYGAIIVNHVSNNISCYGVNSGN--DNVLSHGEIAAFN 99

Query: 61  MGCRILSQE----------ILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI 110
              ++                    LY + EPC MCAAA     + R+ YG   P    I
Sbjct: 100 NCTKLYPSPTGNDRTNPGINWANHTLYTSAEPCPMCAAASVWRGLGRMVYGTDIPTLARI 159

Query: 111 EN 112
            +
Sbjct: 160 GS 161


>gi|308272413|emb|CBX29018.1| hypothetical protein N47_P17230 [uncultured Desulfobacterium sp.]
          Length = 196

 Score = 76.9 bits (189), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 34/167 (20%), Positives = 62/167 (37%), Gaps = 27/167 (16%)

Query: 1   MKKGNVF-------MSCALEEAQNAALRN-EIPVGAVAVLN--NKIISRAGNRNRELKDV 50
           + K   F       MS  ++ +Q    R    P  A    +   K++S   N        
Sbjct: 20  INKHPAFISSIEDRMSFVIKASQLNVSRGTGGPFAAAIFESESGKLLSLGVNLVTSGGLS 79

Query: 51  TAHAEILAIRMGCRILSQEILPEV-----DLYVTLEPCTMCAAAISLARIRRLYYGASNP 105
             HAE+LA  +  + ++   L        +L  + EPC MC  AI+ + +RR+  GAS+ 
Sbjct: 80  ILHAEVLAFALAQKKVATYDLGGANLPSHELVSSTEPCAMCLGAIAWSGVRRVITGASDY 139

Query: 106 KGGGIENGTQFYTLATC-HHSPE-------IYPGISEQRSRQIIQDF 144
               I     F       +   E       +   +  + + +++ D+
Sbjct: 140 DARIIG----FDEGPKIKNWKTELENRGIAVICDVRREEAAKVLLDY 182


>gi|259503079|ref|ZP_05745981.1| ComE operon protein 2 [Lactobacillus antri DSM 16041]
 gi|259168945|gb|EEW53440.1| ComE operon protein 2 [Lactobacillus antri DSM 16041]
          Length = 163

 Score = 76.9 bits (189), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 33/119 (27%), Positives = 45/119 (37%), Gaps = 22/119 (18%)

Query: 1   MKK----GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKD------- 49
           MKK       FM  A   A  +  +  + VGAV V + +II+   N +    D       
Sbjct: 1   MKKRIDWDQYFMIQAALLASRSTCKR-LSVGAVLVRDKRIIAGGYNGSVSGDDHCIDEGC 59

Query: 50  --------VTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
                    T HAE+ AI    R           LYVT  PC  C  ++  A I+ + Y
Sbjct: 60  YLRDGHCVRTIHAEMNAILQCARFGISTD--GASLYVTDFPCLQCTKSLLQAGIKEINY 116


>gi|257093103|ref|YP_003166744.1| riboflavin biosynthesis protein RibD [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
 gi|257045627|gb|ACV34815.1| riboflavin biosynthesis protein RibD [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
          Length = 365

 Score = 76.9 bits (189), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 32/150 (21%), Positives = 52/150 (34%), Gaps = 23/150 (15%)

Query: 4   GNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
            + FM+ AL  A+        P   VG V V + +++    +          HAE+ A++
Sbjct: 6   DHDFMARALRLAERGLYTT-TPNPRVGCVIVADGEVVGEGWHVRAGG----RHAEVHALQ 60

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
                           YVTLEPC        C  A+  A + R+     +P      +G 
Sbjct: 61  AAGEKA-----AGATAYVTLEPCSHHGRTPPCVEALLAAGVARVVAAMQDPNPQVAGSG- 114

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
              +L       E   G+    + +I   F
Sbjct: 115 -LASLQAAGVRAEC--GLLAAEAGEINIGF 141


>gi|154248198|ref|YP_001419156.1| riboflavin biosynthesis protein RibD [Xanthobacter autotrophicus
           Py2]
 gi|154162283|gb|ABS69499.1| riboflavin biosynthesis protein RibD [Xanthobacter autotrophicus
           Py2]
          Length = 383

 Score = 76.9 bits (189), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 35/150 (23%), Positives = 53/150 (35%), Gaps = 25/150 (16%)

Query: 2   KKGNVFMSCALEEAQNAALRN--EIPVGAVAVL--NNK--IISRAGNRNRELKDVTAHAE 55
           +    FM+ AL+  Q+   R      VGAV V   + +  I+  A            HAE
Sbjct: 15  EDDERFMAEALKVGQSGLGRTWPNPSVGAVVVQHVDGRPHIVGAA--ATAPTGRP--HAE 70

Query: 56  ILAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGG 109
            +A+                LYVTLEPC        CA A+  A +RR+     +P    
Sbjct: 71  PIALAQAGEAA-----RGSTLYVTLEPCSHHGRTPPCAGAVIAAGVRRVVAAIEDPDHRV 125

Query: 110 IENGTQFYTLATCHHSPEIYPGISEQRSRQ 139
              G      A       +  G+  +++  
Sbjct: 126 KGRGVARLRAAG----IWVTVGVGAEQALA 151


>gi|87301124|ref|ZP_01083965.1| riboflavin biosynthesis protein RibD [Synechococcus sp. WH 5701]
 gi|87284092|gb|EAQ76045.1| riboflavin biosynthesis protein RibD [Synechococcus sp. WH 5701]
          Length = 354

 Score = 76.9 bits (189), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 38/151 (25%), Positives = 53/151 (35%), Gaps = 22/151 (14%)

Query: 8   MSCALEEAQNAALRNEI-P-VGA-VAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           M  AL  A  A  R    P VGA V   N  ++    +          HAE+ A+     
Sbjct: 1   MERALGLAALAQGRTSPNPLVGALVLDANGLLVGEGFHA--AAGRP--HAEVGALAQAG- 55

Query: 65  ILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
               E      L VTLEPC        C+ A+  A IRR+     +P       G +   
Sbjct: 56  ----ERARGGTLVVTLEPCCHHGRTPPCSEAVIAAGIRRVIVAMEDPDPRVAGQGIEALR 111

Query: 119 LATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
            A      E+  G+ +  +R +   F    R
Sbjct: 112 QAGA----EVLVGVRQSEARNLNAAFCHRLR 138


>gi|315444248|ref|YP_004077127.1| cytosine/adenosine deaminase [Mycobacterium sp. Spyr1]
 gi|315262551|gb|ADT99292.1| cytosine/adenosine deaminase [Mycobacterium sp. Spyr1]
          Length = 159

 Score = 76.9 bits (189), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 26/103 (25%), Positives = 43/103 (41%), Gaps = 2/103 (1%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKII-SRAGNRNRELKDVTAHAEILAIR 60
                 +   +E A+ A    + P G++ +  + +      NR  +  D T H E    +
Sbjct: 5   DDDLRHLRRCVELAREAQEAGDEPFGSLLLDADGVTRVEDRNRV-KDGDATRHPEYAIAK 63

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
                LS +      +Y + E CTMCAAA +   + R+ Y AS
Sbjct: 64  WAVENLSPDDRARATVYTSGEHCTMCAAAHAWVGLGRVVYAAS 106


>gi|34558306|ref|NP_908121.1| putative riboflavin-specific deaminase [Wolinella succinogenes DSM
           1740]
 gi|34484025|emb|CAE11021.1| PUTATIVE RIBOFLAVIN-SPECIFIC DEAMINASE EC 3.5.4 [Wolinella
           succinogenes]
          Length = 344

 Score = 76.9 bits (189), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 33/172 (19%), Positives = 60/172 (34%), Gaps = 40/172 (23%)

Query: 4   GNVFMSCALEEAQN--AALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIR 60
              +M  AL+EA            VGA+ +    +I+S A ++       + HAE+LA++
Sbjct: 10  HEFYMELALQEAWKYQGLTLPNPAVGALLLGEHGEILSIAAHQRA----GSPHAEVLALQ 65

Query: 61  MG-CRILSQEI---------------------LPEVDLYVTLEPC------TMCAAAISL 92
            G  R+                               LYVTLEPC        C+  ++ 
Sbjct: 66  EGYARLSGNADILALHDSSQIHDYLLAHSQGIFRHCTLYVTLEPCNHYGQTPPCSELLAR 125

Query: 93  ARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
            + + +  G  +P         +            ++ GI E+   +++  F
Sbjct: 126 LKPKSVIIGKRDPNPKASGGIDRLKEA-----GIAVHTGIKEEACHKLLLPF 172


>gi|302381385|ref|YP_003817208.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase
           [Brevundimonas subvibrioides ATCC 15264]
 gi|302192013|gb|ADK99584.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase
           [Brevundimonas subvibrioides ATCC 15264]
          Length = 209

 Score = 76.9 bits (189), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 34/151 (22%), Positives = 52/151 (34%), Gaps = 32/151 (21%)

Query: 4   GNVFMSCALEEA--QNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTA-----HAEI 56
             V M  A++ A  +         VG V V +  ++S A          TA     HAE 
Sbjct: 7   DQVHMRRAIDLALARMGETWPNPAVGCVIVKDGMVLSEA---------ATAPGGRPHAEE 57

Query: 57  LAIRMGCRILSQEILPEVDLYVTLEPC-------TMCAAAISLARIRRLYYGASNPKGGG 109
            A+           +     YVTLEPC         CA  ++ A I R+   A +P    
Sbjct: 58  QAVPAAG-----PGVAGATAYVTLEPCGARSSGRASCAQFLAEAGISRVVVAALDPSPFA 112

Query: 110 IENGTQFYTLATCHHSPEIYPGISEQRSRQI 140
              GT+    A       +  G+ +  +  +
Sbjct: 113 SGRGTERLRQAGL----RVETGLMKDEAGVL 139


>gi|160914266|ref|ZP_02076487.1| hypothetical protein EUBDOL_00276 [Eubacterium dolichum DSM 3991]
 gi|158433893|gb|EDP12182.1| hypothetical protein EUBDOL_00276 [Eubacterium dolichum DSM 3991]
          Length = 170

 Score = 76.9 bits (189), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 33/119 (27%), Positives = 45/119 (37%), Gaps = 31/119 (26%)

Query: 4   GNVFMSCALEEAQNAALRNEIP---VGAVAVLN-NKIISRAGN-------------RNRE 46
              FM  A   A+ +      P   VGA  V + +K++S   N                 
Sbjct: 19  DEYFMGLAHLSAKRSKD----PNTQVGAAIVNDQHKVVSIGYNGFPNGCHDDDFPWEREG 74

Query: 47  LKDVTA-----HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
               T      HAE+ AI     + S   L    +YV+L PC  CA AI  + IRR+ Y
Sbjct: 75  DFCATKYPYVVHAELNAI-----LNSSTNLQGCSIYVSLFPCNECAKAIIQSGIRRVVY 128


>gi|303289711|ref|XP_003064143.1| cytidine and deoxycytidylate deaminase zinc-binding protein
           [Micromonas pusilla CCMP1545]
 gi|226454459|gb|EEH51765.1| cytidine and deoxycytidylate deaminase zinc-binding protein
           [Micromonas pusilla CCMP1545]
          Length = 371

 Score = 76.5 bits (188), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 31/125 (24%), Positives = 45/125 (36%), Gaps = 33/125 (26%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKII-SRAGN-------------- 42
           +   + FMS A   AQ +      P   VGAV V  +K+I     N              
Sbjct: 133 LSWDDYFMSVAFLSAQRSKD----PNKQVGAVIVGADKVISGVGYNGFPRGCSDRSLPWA 188

Query: 43  RNRELKDV-------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARI 95
           +     D          HAE+ AI       + + L    +YVT+ PC  C+  I  + I
Sbjct: 189 KRSPTDDPMETKYAYVCHAEMNAIMN----KNSQSLNGATMYVTMYPCNECSKLIIQSGI 244

Query: 96  RRLYY 100
             + Y
Sbjct: 245 TEVVY 249


>gi|315225628|ref|ZP_07867437.1| competence protein ComEB [Capnocytophaga ochracea F0287]
 gi|314944445|gb|EFS96485.1| competence protein ComEB [Capnocytophaga ochracea F0287]
          Length = 146

 Score = 76.5 bits (188), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 30/121 (24%), Positives = 46/121 (38%), Gaps = 17/121 (14%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDV------------T 51
              +M  A+E A+ +  + +  VGA+ V +  IIS   N      D              
Sbjct: 13  DKAYMRMAMEWAKLSYSQRKQ-VGAIIVKDRMIISDGYNGTPTGFDNCCEDEEGNTHWYV 71

Query: 52  AHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY--GASNPKGGG 109
            HAE  AI                LY+T+ PC  C+  I  + I+R+ Y  G  + +G  
Sbjct: 72  LHAEANAIMKVASSTQSS--EGATLYITMSPCKECSKLIYQSGIKRVVYKEGYRDNEGLA 129

Query: 110 I 110
            
Sbjct: 130 F 130


>gi|294494911|ref|YP_003541404.1| CMP/dCMP deaminase zinc-binding protein [Methanohalophilus mahii
           DSM 5219]
 gi|292665910|gb|ADE35759.1| CMP/dCMP deaminase zinc-binding protein [Methanohalophilus mahii
           DSM 5219]
          Length = 156

 Score = 76.5 bits (188), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 33/141 (23%), Positives = 49/141 (34%), Gaps = 30/141 (21%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGN----------------RNREL 47
              F+  A   A+ +       VGAV V + +I+S   N                +   +
Sbjct: 8   DEYFLEIATVIAKRSTCLRNR-VGAVIVRDKQILSTGYNGAPSNMEHCLDIGCIRQKNNI 66

Query: 48  KDVTAH-------AEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
           +  T H       AE  AI      L    +    LY T +PC +C   I  +RI+R+ Y
Sbjct: 67  ESGTRHEKCRAVHAEQNAIIQAA--LHGAGIEGATLYCTHQPCILCTKMIINSRIKRVVY 124

Query: 101 GASNPKGGGIENGTQFYTLAT 121
             S P          F+  A 
Sbjct: 125 LTSYPDTDA----LDFFNDAG 141


>gi|154253350|ref|YP_001414174.1| riboflavin biosynthesis protein RibD [Parvibaculum lavamentivorans
           DS-1]
 gi|154157300|gb|ABS64517.1| riboflavin biosynthesis protein RibD [Parvibaculum lavamentivorans
           DS-1]
          Length = 372

 Score = 76.5 bits (188), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 32/161 (19%), Positives = 55/161 (34%), Gaps = 28/161 (17%)

Query: 4   GNVFMSCALEEAQNAALR--NEIPVGAVAVLNN----KIISRAGNRNRELKDVTAHAEIL 57
              FM  AL  A+    R      VG V V ++    +++ R   +         HAE  
Sbjct: 6   DAQFMKMALTLAERGLGRVAPNPAVGCVVVRDDGDGPRVVGRGWTQPGGR----PHAETE 61

Query: 58  AIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIE 111
                    +  +     +YV+LEPC+       CA A+  A + R+    ++P      
Sbjct: 62  -----ALARAGALARGATVYVSLEPCSHHGKTGPCAEALIKAGVARVVGAIADPNPAVAG 116

Query: 112 NGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF---KERR 149
            G             E+   +    +  + + FF    E+R
Sbjct: 117 RGFAALEANG----IEVTENVCAADAHHLNEGFFLTMSEKR 153


>gi|223984558|ref|ZP_03634689.1| hypothetical protein HOLDEFILI_01984 [Holdemania filiformis DSM
           12042]
 gi|223963486|gb|EEF67867.1| hypothetical protein HOLDEFILI_01984 [Holdemania filiformis DSM
           12042]
          Length = 160

 Score = 76.5 bits (188), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 34/136 (25%), Positives = 47/136 (34%), Gaps = 33/136 (24%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVL-NNKIISRAGN-------------- 42
           +     FM  A   A  +      P   VGAV V   +K++    N              
Sbjct: 7   LSWDEYFMGLAHLSAMRSKD----PSTQVGAVIVDQEHKVVGIGYNGLPIGCSDDEFPWD 62

Query: 43  ----RNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98
                         HAE+ AI     + S   L    LYV+L PC  CA AI  + IR++
Sbjct: 63  REGGMLETKYAFVVHAELNAI-----LNSTRDLHGCTLYVSLFPCNECAKAIIQSGIRKI 117

Query: 99  YYGASNPKGGGIENGT 114
            Y   + K    +N  
Sbjct: 118 VY--EDDKYAAADNVI 131


>gi|156564196|ref|YP_001429706.1| deoxycytidylate deaminase [Bacillus phage 0305phi8-36]
 gi|154622893|gb|ABS83773.1| deoxycytidylate deaminase [Bacillus phage 0305phi8-36]
          Length = 255

 Score = 76.5 bits (188), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 30/112 (26%), Positives = 43/112 (38%), Gaps = 18/112 (16%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRN-----------RELKDV-- 50
              F+  AL  A+         VG V V  N++I+   N +             +KD   
Sbjct: 117 DQYFIEQALHVAERGTCSRAR-VGCVLVKENRVIATGYNGSPKGMPHCDDIGHLMKDGHC 175

Query: 51  --TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
             T HAE  A+    R+           YVT EPC  C   ++ A I+R+ Y
Sbjct: 176 VRTNHAEENALLQCARLGISS--EGATAYVTHEPCLYCTRQLNQAGIKRIVY 225


>gi|20089036|ref|NP_615111.1| dCMP deaminase [Methanosarcina acetivorans C2A]
 gi|19913893|gb|AAM03591.1| dCMP deaminase [Methanosarcina acetivorans C2A]
          Length = 150

 Score = 76.5 bits (188), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 29/127 (22%), Positives = 42/127 (33%), Gaps = 26/127 (20%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNR--------------NRELKD 49
              F+  A   A+ A       VGAV V + +I+S   N                   K 
Sbjct: 8   DEYFLEIAFVVAKRATCLRNN-VGAVIVRDKRILSTGYNGAPSGLEHCLDIGCIRELEKI 66

Query: 50  VTA---------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
            +          HAE  AI           +    +Y T +PC +CA  I  + I+R+ Y
Sbjct: 67  PSGTRHEKCRAVHAEQNAIIQAAIHGVS--ISGATIYCTHQPCILCAKMIINSNIKRVVY 124

Query: 101 GASNPKG 107
               P  
Sbjct: 125 STPYPDT 131


>gi|114562213|ref|YP_749726.1| riboflavin biosynthesis protein RibD [Shewanella frigidimarina
           NCIMB 400]
 gi|114333506|gb|ABI70888.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Shewanella frigidimarina NCIMB 400]
          Length = 381

 Score = 76.5 bits (188), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 35/152 (23%), Positives = 55/152 (36%), Gaps = 18/152 (11%)

Query: 4   GNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
               MS A+  A+         P VG V V  NKII    ++         HAE+ A++M
Sbjct: 8   DTQMMSRAIALAEKGRYTTRPNPCVGCVIVYQNKIIGEGYHQRAGQG----HAEVNALKM 63

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
                +         YVTLEPC        CA  +  A++ R+    ++        G  
Sbjct: 64  V--HDNGLSAEGATAYVTLEPCSHYGRTPPCALGLINAKVARVVVAVTDANPEVSGRGIT 121

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
               A      E+  G+  +++  +   F K 
Sbjct: 122 LLREAG----VEVDVGLLCEQAYDLNLGFMKR 149


>gi|167914873|ref|ZP_02501964.1| riboflavin biosynthesis protein [Burkholderia pseudomallei 112]
          Length = 112

 Score = 76.5 bits (188), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 28/110 (25%), Positives = 39/110 (35%), Gaps = 17/110 (15%)

Query: 4   GNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
               M+ AL  A+           VG V     + +    +R         HAE+ A+R 
Sbjct: 8   DRTHMAHALRLAEQGLYTTHPNPRVGCVIARGARTLGAGWHRRAGE----PHAEVHALRE 63

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNP 105
                  E       YVTLEPC        CA A+  A + R+   A +P
Sbjct: 64  AG-----ERARGATAYVTLEPCAHFGRTPPCANALVAAGVARVVIAARDP 108


>gi|158422887|ref|YP_001524179.1| riboflavin biosynthesis protein [Azorhizobium caulinodans ORS 571]
 gi|158329776|dbj|BAF87261.1| riboflavin biosynthesis protein [Azorhizobium caulinodans ORS 571]
          Length = 384

 Score = 76.5 bits (188), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 38/150 (25%), Positives = 52/150 (34%), Gaps = 25/150 (16%)

Query: 2   KKGNVFMSCALEEAQNAALRN--EIPVGAVAVLNN----KIISRAGNRNRELKDVTAHAE 55
           ++    M+ AL   Q    R      VGAV V       +I+ RAG           HAE
Sbjct: 17  EEDEALMAEALAVGQLGLGRTWPNPSVGAVVVRPTSAGPQILGRAGTAPAGR----PHAE 72

Query: 56  ILAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGG 109
            LA+                LYVTLEPC        CA A+  A I R+     +P    
Sbjct: 73  PLALAQAGDAA-----RGATLYVTLEPCSHFGRTPPCADAVIAAGITRVVAAVEDPDPRV 127

Query: 110 IENGTQFYTLATCHHSPEIYPGISEQRSRQ 139
              G      A       +  G+  +R+ +
Sbjct: 128 RGRGVARMRAAGL----WVTVGVGAERALE 153


>gi|297621291|ref|YP_003709428.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Waddlia chondrophila WSU 86-1044]
 gi|297376592|gb|ADI38422.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Waddlia chondrophila WSU 86-1044]
          Length = 339

 Score = 76.5 bits (188), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 32/148 (21%), Positives = 56/148 (37%), Gaps = 26/148 (17%)

Query: 3   KGNVFMSCALEEAQNAALRNEIP----VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
               +M  A+ E     L  + P    VG + V N +I+    +     +    HAE+ A
Sbjct: 2   DDRRWMEMAIAEGLKGRL--DAPPNPWVGCILVKNGQIVGLGHH----PECGLPHAEVYA 55

Query: 59  IRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIEN 112
           +R   +            YVTLEPC        C  A+  A + R+  G  +P      +
Sbjct: 56  LREAGQ-----NARGATAYVTLEPCVHTGRTLPCIHALIEAGVARVVVGVEDPDPKVSGS 110

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQI 140
           G     +A      ++  G+ E+ + ++
Sbjct: 111 GIAALKIAG----IKVTVGV-EREAVEL 133


>gi|318042152|ref|ZP_07974108.1| putative diaminohydroxyphosphoribosylaminopyrimidine deaminase and
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Synechococcus sp. CB0101]
          Length = 359

 Score = 76.5 bits (188), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 33/149 (22%), Positives = 54/149 (36%), Gaps = 26/149 (17%)

Query: 7   FMSCALEEAQNAALRNEI-P---VGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           +M  AL+ A  A       P   VG V +    +++    ++       T HAE+ A+R 
Sbjct: 8   WMQRALQLA--ALGNGRTSPNPLVGCVVLDRAGQLVGEGFHQRA----GTPHAEVHALRQ 61

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
                  E        VTLEPC        C+ A+  A + R+     +P       G  
Sbjct: 62  AG-----ERARGGTAVVTLEPCCHHGRTPPCSEALLAAGVARVVVAMRDPDPRVAGKGLA 116

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDF 144
               A      ++  G+ E  +R + + F
Sbjct: 117 QLRDAG----VDVLEGVCEAEARILNRGF 141


>gi|159465663|ref|XP_001691042.1| predicted protein [Chlamydomonas reinhardtii]
 gi|158279728|gb|EDP05488.1| predicted protein [Chlamydomonas reinhardtii]
          Length = 93

 Score = 76.5 bits (188), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 2/76 (2%)

Query: 74  VDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH--HSPEIYPG 131
            +LYVT+EPC MCA A+SL   R++YYG  N + GG  +          H         G
Sbjct: 2   CELYVTVEPCIMCAGALSLLGFRQVYYGCGNDRFGGCGSILPVNGEGCVHVGRGFPAQGG 61

Query: 132 ISEQRSRQIIQDFFKE 147
           +  + + +++++F+  
Sbjct: 62  LFPEEAVELLREFYAA 77


>gi|326803497|ref|YP_004321315.1| ComE operon protein 2 [Aerococcus urinae ACS-120-V-Col10a]
 gi|326650126|gb|AEA00309.1| ComE operon protein 2 [Aerococcus urinae ACS-120-V-Col10a]
          Length = 170

 Score = 76.1 bits (187), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 32/118 (27%), Positives = 51/118 (43%), Gaps = 21/118 (17%)

Query: 1   MKK---GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRE----------- 46
           MK+      F+S AL  +  +   + + VGAV V +N++I+   N +             
Sbjct: 1   MKRIPWDQYFLSQALVLSMRS-TCDRLMVGAVIVRDNRVIAGGYNGSVSGETHCSEGGCY 59

Query: 47  LKDV----TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
           L+D     T HAE+ AI    +          ++YVT  PC  C   I  A I+++ Y
Sbjct: 60  LEDGHCVRTIHAEMNAIIQCAKFGVST--EGAEIYVTHFPCLPCTKQIIQAGIKKVSY 115


>gi|309778050|ref|ZP_07672990.1| probable deoxycytidylate deaminase [Erysipelotrichaceae bacterium
           3_1_53]
 gi|308914187|gb|EFP59987.1| probable deoxycytidylate deaminase [Erysipelotrichaceae bacterium
           3_1_53]
          Length = 164

 Score = 76.1 bits (187), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 36/130 (27%), Positives = 52/130 (40%), Gaps = 33/130 (25%)

Query: 4   GNVFMSCALEEAQNAALRNEIP---VGAVAVLN-NKIISRAGN--------------RNR 45
              FM  A   A+ +      P   VGAV V + ++++S   N              R  
Sbjct: 10  DEYFMGLAHLSAKRSKD----PSTQVGAVIVSDEHRVVSIGYNGFPNGCSDDEFPWDREG 65

Query: 46  ELKDV----TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
           E  +       HAE+ AI     + S+  L    +YV+L PC  CA AI  + I R+ Y 
Sbjct: 66  EFGNTKYPYVVHAELNAI-----LNSKHDLKGCSIYVSLFPCNECAKAIIQSGISRIVY- 119

Query: 102 ASNPKGGGIE 111
             + K G  E
Sbjct: 120 -ESDKYGHTE 128


>gi|149186473|ref|ZP_01864786.1| riboflavin-specific deaminase/reductase [Erythrobacter sp. SD-21]
 gi|148830062|gb|EDL48500.1| riboflavin-specific deaminase/reductase [Erythrobacter sp. SD-21]
          Length = 329

 Score = 76.1 bits (187), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 27/113 (23%), Positives = 40/113 (35%), Gaps = 18/113 (15%)

Query: 3   KGNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
               ++  A   A       R    VG + V   ++I+R     RE      HAE +A+ 
Sbjct: 6   SDARWLDAAARLASRGRPLARPNPAVGCLLVNKGRVIARGW--TREGGRP--HAEAVALE 61

Query: 61  MGCRILSQEILPEVDLYVTLEPC-------TMCAAAISLARIRRLYYGASNPK 106
                           YVTLEPC         C+  +  A + R+  GA +P 
Sbjct: 62  QAGSAA-----RGATAYVTLEPCAHRSTRGPACSDLLVKAGVARVVVGALDPD 109


>gi|86152320|ref|ZP_01070531.1| riboflavin biosynthesis protein RibD [Campylobacter jejuni subsp.
           jejuni 260.94]
 gi|315125029|ref|YP_004067033.1| riboflavin biosynthesis protein RibD [Campylobacter jejuni subsp.
           jejuni ICDCCJ07001]
 gi|85840809|gb|EAQ58060.1| riboflavin biosynthesis protein RibD [Campylobacter jejuni subsp.
           jejuni 260.94]
 gi|315018751|gb|ADT66844.1| riboflavin biosynthesis protein RibD [Campylobacter jejuni subsp.
           jejuni ICDCCJ07001]
          Length = 326

 Score = 76.1 bits (187), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 41/181 (22%), Positives = 67/181 (37%), Gaps = 45/181 (24%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAV-LNNKIIS-RAGNRNRELKDVTAHAE 55
           MK    +M+ AL EA         P   VG V +  N KI++ +A       K   AHAE
Sbjct: 1   MK--EFYMNLALNEAWK-YQFLTYPNPAVGCVILDKNGKILAIKAH-----EKAGLAHAE 52

Query: 56  ILAIRMGCRILSQEI--------------------LPEVDLYVTLEPC------TMCAAA 89
           + AI    + L  EI                      +   +VTLEPC        CA  
Sbjct: 53  LNAITHAFKSLRPEISLPKEANALHEFICKNHQGVFKDSIAFVTLEPCSHQGKTPPCAKL 112

Query: 90  ISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK-ER 148
            S    ++++    +        G +F          E+   I ++  +++++ F K ++
Sbjct: 113 FSELGFKKIFISVKDENKIASG-GAEFLKKQG----IEVEFDILKEEGKKLLKPFLKWQK 167

Query: 149 R 149
           R
Sbjct: 168 R 168


>gi|260912280|ref|ZP_05918831.1| cytidine/deoxycytidylate deaminase [Prevotella sp. oral taxon 472
           str. F0295]
 gi|260633581|gb|EEX51720.1| cytidine/deoxycytidylate deaminase [Prevotella sp. oral taxon 472
           str. F0295]
          Length = 144

 Score = 76.1 bits (187), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 31/110 (28%), Positives = 44/110 (40%), Gaps = 15/110 (13%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRN--------RELKDVT---- 51
              ++  A   A+N+       VGA+ V +  IIS   N           +  +VT    
Sbjct: 11  DLRYLRMARIWAENSYCVRRK-VGALVVKDKMIISDGYNGTPSGFENVCEDDNNVTKPYV 69

Query: 52  AHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
            HAE  AI    R  +        LYVT  PC  C+  I  + I+R+ YG
Sbjct: 70  LHAEANAITKLARSSNNSD--GSTLYVTAAPCIECSKLIIQSGIKRVVYG 117


>gi|261880389|ref|ZP_06006816.1| cytidine/deoxycytidylate deaminase [Prevotella bergensis DSM 17361]
 gi|270332934|gb|EFA43720.1| cytidine/deoxycytidylate deaminase [Prevotella bergensis DSM 17361]
          Length = 156

 Score = 76.1 bits (187), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 34/110 (30%), Positives = 45/110 (40%), Gaps = 15/110 (13%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRN--------RELKDVT---- 51
              ++  A   A+N+  +    VGA+ V N  IIS   N           +  D+T    
Sbjct: 14  DGRYLRMARIWAENSYCKR-RQVGALVVKNKMIISDGYNGTPSGFENVCEDDNDLTKPYV 72

Query: 52  AHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
            HAE  AI    R  +        LYVT  PC  CA  I  A I+R+ YG
Sbjct: 73  LHAEANAITKLARSHNNS--EGATLYVTASPCIECAKLIIQAGIKRVVYG 120


>gi|157413823|ref|YP_001484689.1| putative diaminohydroxyphosphoribosylaminopyrimidine deaminase and
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Prochlorococcus marinus str. MIT 9215]
 gi|157388398|gb|ABV51103.1| putative Diaminohydroxyphosphoribosylaminopyrimidine deaminase and
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Prochlorococcus marinus str. MIT 9215]
          Length = 364

 Score = 76.1 bits (187), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 33/151 (21%), Positives = 54/151 (35%), Gaps = 22/151 (14%)

Query: 3   KGNVFMSCALEEAQNAALRNEI-P-VGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAI 59
               +M  A+  A          P VGAV +  N K+IS   +     K    HAE +A 
Sbjct: 7   SHKKWMKRAIFLASLGKNTTSPNPRVGAVILDKNGKLISEGFH----FKAGMPHAEAMAF 62

Query: 60  RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113
               +           +YV LEPC        C   +  + I+R Y    +P       G
Sbjct: 63  NNLKK-----DARGGAIYVNLEPCCHHGRTPPCVDKVISSGIKRAYISIEDPDVRVAGKG 117

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
            +    A      +++ G+ ++ S  + + F
Sbjct: 118 IKKLEEAG----IQVHLGLCKKESLDLNKAF 144


>gi|6572106|emb|CAB63090.1| riboflavin-specific deaminase / reductase [Bartonella henselae str.
           Houston-1]
          Length = 363

 Score = 76.1 bits (187), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 28/140 (20%), Positives = 48/140 (34%), Gaps = 26/140 (18%)

Query: 11  ALEEAQN-AALRNEIP-VGAVAVLNNK-----IISRAGNRNRELKDVTAHAEILAIRMGC 63
           A+  A+    L  E P VG +   N++     I+               HAE+ A++M  
Sbjct: 2   AIRLAERHVGLTGENPSVGTIIARNDENVGVYIVGYG----VTAIQGRPHAEVQALQMAG 57

Query: 64  RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFY 117
            +           YVTLEPC+       C   +  + I R+    ++        G    
Sbjct: 58  SLAH-----GATAYVTLEPCSHYGKTSPCVNTLLKSGISRVVIALTDLDKRVNGRGIALL 112

Query: 118 TLATCHHSPEIYPGISEQRS 137
             A      E+  G+  + +
Sbjct: 113 RAAG----IEVIEGVLAKEA 128


>gi|281200522|gb|EFA74740.1| hypothetical protein PPL_11771 [Polysphondylium pallidum PN500]
          Length = 237

 Score = 76.1 bits (187), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 24/111 (21%), Positives = 48/111 (43%), Gaps = 11/111 (9%)

Query: 33  NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISL 92
           NN ++    N      ++ +H EI+AI     + +  +   + LY T EPC MCA+A+  
Sbjct: 91  NNNLMCSGVNT--GKPNMISHGEIVAINNCSALYNTTVFTNMTLYTTGEPCAMCASALLW 148

Query: 93  ARIRRLYYGASNPKGGGIENGTQFYTLATC---------HHSPEIYPGISE 134
           A  + + YG +N +       +     ++          + +P +  G+ +
Sbjct: 149 ADFKTVVYGTANKRLYCQTCMSNIPIDSSYIMGRYYGLRNRAPRLIGGVLQ 199


>gi|118617420|ref|YP_905752.1| bifunctional riboflavin biosynthesis protein RibG [Mycobacterium
           ulcerans Agy99]
 gi|118569530|gb|ABL04281.1| bifunctional riboflavin biosynthesis protein RibG [Mycobacterium
           ulcerans Agy99]
          Length = 339

 Score = 76.1 bits (187), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 33/152 (21%), Positives = 61/152 (40%), Gaps = 24/152 (15%)

Query: 8   MSCALEEA--QNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           M  A+E++           PVGAV V     ++   G +     D   HAE++A+R    
Sbjct: 13  MRLAIEQSMLVKGTTYPNPPVGAVIVDQEGWVVGIGGTQP-SGGD---HAEVVALRKAGG 68

Query: 65  ILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
           + +          VT+EPC        C  A+  AR+  + YG ++P  G    G    +
Sbjct: 69  LAAGA-----IAVVTMEPCNHFGKTPPCVNALIEARVGTVIYGVADPN-GIAGGGAGRLS 122

Query: 119 LATCHHSPEIYPGISEQR-SRQIIQDFFKERR 149
            A      ++  G+     +   ++++  ++R
Sbjct: 123 AAGL----QVRSGVLADHVAAGPLREWLHKQR 150


>gi|83319549|ref|YP_424377.1| deoxycytidylate deaminase [Mycoplasma capricolum subsp. capricolum
           ATCC 27343]
 gi|83283435|gb|ABC01367.1| probable deoxycytidylate deaminase [Mycoplasma capricolum subsp.
           capricolum ATCC 27343]
          Length = 153

 Score = 76.1 bits (187), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 40/128 (31%), Positives = 53/128 (41%), Gaps = 33/128 (25%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLN-NKIISRAGN---RNRELKDVT-- 51
           M   + FM  A   A  +      P   VGA+ V    +I++   N   R     D    
Sbjct: 1   MSWQHYFMLIAKASAMRSKD----PNTQVGAIVVNELQQIVATGYNGFPRGVSDDDFPWS 56

Query: 52  --------------AHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRR 97
                         AHAE+ AI     + S+  L   DLYVTL PC  CA  I  A I+R
Sbjct: 57  KTNEDWLENKYAYVAHAELNAI-----VSSRSDLSNCDLYVTLFPCNECAKIIIQAGIKR 111

Query: 98  LYYGASNP 105
           +YY A++P
Sbjct: 112 IYY-ANDP 118


>gi|315923999|ref|ZP_07920227.1| deoxycytidylate deaminase [Pseudoramibacter alactolyticus ATCC
           23263]
 gi|315622839|gb|EFV02792.1| deoxycytidylate deaminase [Pseudoramibacter alactolyticus ATCC
           23263]
          Length = 165

 Score = 76.1 bits (187), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 34/119 (28%), Positives = 40/119 (33%), Gaps = 24/119 (20%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRN-----------RELK 48
           +     FM  AL  AQ +       VGA  V   NKI+S   N                 
Sbjct: 13  LSWDQYFMGIALLSAQRSKDPG-TQVGACIVSPENKILSMGYNGMPIGCSDDEMPWAREG 71

Query: 49  DVTA-------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
           D          HAE  AI           L    LYVTL PC  C  AI    I+++ Y
Sbjct: 72  DPLDTKYLYVCHAEFNAILNSGAKT----LQGATLYVTLFPCNECTKAIIQCGIKKVVY 126


>gi|302408545|ref|XP_003002107.1| FCY1p [Verticillium albo-atrum VaMs.102]
 gi|261359028|gb|EEY21456.1| FCY1p [Verticillium albo-atrum VaMs.102]
          Length = 239

 Score = 76.1 bits (187), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 25/97 (25%), Positives = 36/97 (37%), Gaps = 18/97 (18%)

Query: 25  PVGAVAVLN-----NKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEI--------- 70
           P G V V +       I+    N + +  +   H E+ AI     IL+            
Sbjct: 70  PFGTVIVNHTVSGRGGIVCTGENTSHQSGNPIMHGEMAAIANCSHILTDPTGPYNMTVAE 129

Query: 71  ----LPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
                 ++ +Y   E C MCA+AI  A  R   YG S
Sbjct: 130 ALAAFSDLTIYTNAESCPMCASAIRWAGFREYVYGTS 166


>gi|270157224|ref|ZP_06185881.1| riboflavin biosynthesis protein RibD [Legionella longbeachae
           D-4968]
 gi|289164378|ref|YP_003454516.1| Riboflavin biosynthesis protein RibD [Legionella longbeachae
           NSW150]
 gi|269989249|gb|EEZ95503.1| riboflavin biosynthesis protein RibD [Legionella longbeachae
           D-4968]
 gi|288857551|emb|CBJ11389.1| Riboflavin biosynthesis protein RibD [Legionella longbeachae
           NSW150]
          Length = 357

 Score = 76.1 bits (187), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 34/111 (30%), Positives = 48/111 (43%), Gaps = 17/111 (15%)

Query: 4   GNVFMSCALEEAQNAALR-NEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
              F+  ALE+A+         P VGAVAV N  II++A +R       T HAE L +  
Sbjct: 2   HKKFLLAALEQARLGQGHCAPNPCVGAVAVQNGTIIAQAHHR----GAGTPHAEQLLLTQ 57

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPK 106
                     P + LY++LEPC        C  AI    +  + +G  +P 
Sbjct: 58  -----IPPKTPGICLYISLEPCNHWGRTPPCVDAIINHGVEEVVFGYLDPN 103


>gi|283953762|ref|ZP_06371293.1| riboflavin biosynthesis protein RibD, putative [Campylobacter
           jejuni subsp. jejuni 414]
 gi|283794803|gb|EFC33541.1| riboflavin biosynthesis protein RibD, putative [Campylobacter
           jejuni subsp. jejuni 414]
          Length = 326

 Score = 76.1 bits (187), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 41/177 (23%), Positives = 64/177 (36%), Gaps = 44/177 (24%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAV-LNNKIIS-RAGNRNRELKDVTAHAE 55
           MK    +M+ AL EA         P   VG V +  N KI++ +A       K   AHAE
Sbjct: 1   MK--EFYMNLALNEAWK-YQFLTYPNPAVGCVILDKNGKILAIKAH-----EKAGFAHAE 52

Query: 56  ILAIRMGCRILSQEI--------------------LPEVDLYVTLEPC------TMCAAA 89
           +  I    + L+ EI                      +   +VTLEPC        CA  
Sbjct: 53  LNTIAHAFKNLNPEISLPKEANAMHKFICKNHRGIFKDSIAFVTLEPCSHQGKTPPCAKL 112

Query: 90  ISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
            S    ++++    +        G  F          E+  GI E+  +++++ F K
Sbjct: 113 FSDLGFKKVFISVKDENKVASG-GADFLKKQG----IEVEFGILEEEGKKLLKPFLK 164


>gi|213401731|ref|XP_002171638.1| tRNA-specific adenosine deaminase subunit tad3 [Schizosaccharomyces
           japonicus yFS275]
 gi|211999685|gb|EEB05345.1| tRNA-specific adenosine deaminase subunit tad3 [Schizosaccharomyces
           japonicus yFS275]
          Length = 307

 Score = 76.1 bits (187), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 25/135 (18%), Positives = 47/135 (34%), Gaps = 18/135 (13%)

Query: 8   MSCALEEAQNAALRNEIPVGAVA----VLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
           M   L  A+       +P         + N+ I+S   +  +   +   HA I  I    
Sbjct: 155 MDEVLRLARQQESSGNVP--CAIAIYDLDNDTILSLQADDRKNSGNPLHHAAIQGINNVA 212

Query: 64  RILSQEILPEV------------DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIE 111
               +  + +                ++ EPC MC+ A+  +RI RL Y +  P  G ++
Sbjct: 213 VKERERRMLDHDPKEERYLCTNLTAVMSHEPCVMCSMALLHSRIHRLIYCSPQPSTGAMQ 272

Query: 112 NGTQFYTLATCHHSP 126
           +    +     +H  
Sbjct: 273 SSYGIHWRTELNHRY 287


>gi|254392899|ref|ZP_05008067.1| riboflavin biosynthesis protein RibD [Streptomyces clavuligerus
           ATCC 27064]
 gi|197706554|gb|EDY52366.1| riboflavin biosynthesis protein RibD [Streptomyces clavuligerus
           ATCC 27064]
          Length = 379

 Score = 75.7 bits (186), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 28/142 (19%), Positives = 44/142 (30%), Gaps = 25/142 (17%)

Query: 8   MSCALEEAQNAA---LRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
           M  A+E A         N + VG V    + +I     +          HAE+ A+R   
Sbjct: 1   MRRAIELAARGLGSTSPNPV-VGCVITDASGEIAGTGYHERAGG----PHAEVHALRAAG 55

Query: 64  RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFY 117
                        YVTLEPC        C+ A+  A I R+ +  ++P            
Sbjct: 56  -----TRARGGTAYVTLEPCDHTGRTGPCSQALLAAGITRVVHAVADPNPQASGGAGTLR 110

Query: 118 TLATCHHSPEIYPGISEQRSRQ 139
                     +  G+    +  
Sbjct: 111 AA-----GVRVECGLLGPEAEA 127


>gi|239939894|ref|ZP_04691831.1| putative riboflavin/cytosine deaminase [Streptomyces roseosporus
           NRRL 15998]
 gi|239986380|ref|ZP_04707044.1| putative riboflavin/cytosine deaminase [Streptomyces roseosporus
           NRRL 11379]
 gi|291443327|ref|ZP_06582717.1| riboflavin biosynthesis protein RibD [Streptomyces roseosporus NRRL
           15998]
 gi|291346274|gb|EFE73178.1| riboflavin biosynthesis protein RibD [Streptomyces roseosporus NRRL
           15998]
          Length = 366

 Score = 75.7 bits (186), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 28/136 (20%), Positives = 42/136 (30%), Gaps = 25/136 (18%)

Query: 8   MSCALEEAQNAA---LRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGC 63
           M  A+  A         N + VG V       +     ++         HAE+ A+R   
Sbjct: 10  MRRAITLAARGLGSTSPNPV-VGCVITDAAGAVAGEGFHQRAGG----PHAEVHALRAA- 63

Query: 64  RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFY 117
                +       YVTLEPC        C  A+  A I R+ Y   +P       G    
Sbjct: 64  ----DDRARGGTAYVTLEPCNHTGRTGPCVQALLAAGISRVVYAVGDPNPQATGGGDTLR 119

Query: 118 TLATCHHSPEIYPGIS 133
                    ++  G+ 
Sbjct: 120 AA-----GVQVEQGLL 130


>gi|288928373|ref|ZP_06422220.1| cytidine/deoxycytidylate deaminase family protein [Prevotella sp.
           oral taxon 317 str. F0108]
 gi|288331207|gb|EFC69791.1| cytidine/deoxycytidylate deaminase family protein [Prevotella sp.
           oral taxon 317 str. F0108]
          Length = 146

 Score = 75.7 bits (186), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 31/110 (28%), Positives = 44/110 (40%), Gaps = 15/110 (13%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRN--------RELKDVT---- 51
              ++  A   A+N+       VGA+ V +  IIS   N           +  +VT    
Sbjct: 11  DLRYLRMARIWAENSYCVRRK-VGALVVKDKMIISDGYNGTPSGFENVCEDDNNVTKPYV 69

Query: 52  AHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
            HAE  AI    R  +        LYVT  PC  C+  I  + I+R+ YG
Sbjct: 70  LHAEANAITKLARSSNNSD--GSTLYVTAAPCIECSKLIIQSGIKRVVYG 117


>gi|320011955|gb|ADW06805.1| riboflavin biosynthesis protein RibD [Streptomyces flavogriseus
           ATCC 33331]
          Length = 366

 Score = 75.7 bits (186), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 33/142 (23%), Positives = 47/142 (33%), Gaps = 25/142 (17%)

Query: 8   MSCALEEAQN---AALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGC 63
           M  A+  A     A   N + VG V +           ++         HAE+ A+R   
Sbjct: 10  MRRAITLAARGLGATSPNPV-VGCVILDAAGDPAGEGFHQRAGG----PHAEVHALRAAG 64

Query: 64  RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFY 117
                E        VTLEPC        CA A+  A +RR+ Y  S+P       G    
Sbjct: 65  -----ERARGGTAIVTLEPCNHTGRTGPCAQALIEAGVRRVVYAVSDPNPQATG-GADTL 118

Query: 118 TLATCHHSPEIYPGISEQRSRQ 139
             A      E+  G+    +  
Sbjct: 119 RGAGL----EVAQGLLADEAEA 136


>gi|238063934|ref|ZP_04608643.1| riboflavin biosynthesis protein ribD [Micromonospora sp. ATCC
           39149]
 gi|237885745|gb|EEP74573.1| riboflavin biosynthesis protein ribD [Micromonospora sp. ATCC
           39149]
          Length = 353

 Score = 75.7 bits (186), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 25/142 (17%), Positives = 44/142 (30%), Gaps = 25/142 (17%)

Query: 8   MSCALEEAQNAALR---NEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
           M  A+  A         N + VG V +  + +++    +          HAEI+A+    
Sbjct: 10  MRRAIALATRGLGTTSPNPV-VGCVLLDADGEVVGEGFHAYAGG----PHAEIVALAQAG 64

Query: 64  RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFY 117
           R             VTLEPC        C+ A+  A + R+     +P            
Sbjct: 65  R-----RARGGTAVVTLEPCDHTGRPGPCSHALIAAGVARVVIAVPDPNPVASGGAATLR 119

Query: 118 TLATCHHSPEIYPGISEQRSRQ 139
                    ++  G+    +  
Sbjct: 120 AG-----GLDVEVGVRAAEAEA 136


>gi|307721944|ref|YP_003893084.1| CMP/dCMP deaminase zinc-binding protein [Sulfurimonas autotrophica
           DSM 16294]
 gi|306980037|gb|ADN10072.1| CMP/dCMP deaminase zinc-binding protein [Sulfurimonas autotrophica
           DSM 16294]
          Length = 145

 Score = 75.7 bits (186), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 30/123 (24%), Positives = 47/123 (38%), Gaps = 27/123 (21%)

Query: 1   MKKGNVFMSCA--LEEAQNAALRNEIPVGAVAVLNNKIISRAGNRN-------------- 44
           M     F++ A  +  A     +    VGAV V + +I+S   N                
Sbjct: 1   MLDDKNFINIASEIASASKCVSKQ---VGAVIVKDGRILSTGYNGTPAGYTNCCDHWNDE 57

Query: 45  ----RELKDVTA--HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98
                     T   HAE+ AI    R      + +  +YVTLEPC+ C+  +  + I+R+
Sbjct: 58  YTKEHHEWSKTYEIHAEMNAIIWAARKGIS--IEDATIYVTLEPCSECSKNLIASGIKRI 115

Query: 99  YYG 101
            Y 
Sbjct: 116 VYA 118


>gi|182439882|ref|YP_001827601.1| putative riboflavin/cytosine deaminase [Streptomyces griseus subsp.
           griseus NBRC 13350]
 gi|178468398|dbj|BAG22918.1| putative riboflavin/cytosine deaminase [Streptomyces griseus subsp.
           griseus NBRC 13350]
          Length = 366

 Score = 75.7 bits (186), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 29/142 (20%), Positives = 44/142 (30%), Gaps = 25/142 (17%)

Query: 8   MSCALEEAQNAA---LRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGC 63
           M  A+  A         N + VG V       +     ++         HAE+ A+    
Sbjct: 10  MRRAISLAARGLGSTSPNPV-VGCVITDAAGAVAGEGFHQRAGG----PHAEVHAL---- 60

Query: 64  RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFY 117
              +         YVTLEPC        C+ A+  A I R+ Y  ++P  G    G    
Sbjct: 61  -RAAGGRARGGTAYVTLEPCDHTGRTGPCSQALLAAGISRVVYAVADPNPGAAGGGDTL- 118

Query: 118 TLATCHHSPEIYPGISEQRSRQ 139
                H       G+    +  
Sbjct: 119 ----RHAGVRAEGGLLADEAEA 136


>gi|260466843|ref|ZP_05813027.1| riboflavin biosynthesis protein RibD [Mesorhizobium opportunistum
           WSM2075]
 gi|259029345|gb|EEW30637.1| riboflavin biosynthesis protein RibD [Mesorhizobium opportunistum
           WSM2075]
          Length = 376

 Score = 75.7 bits (186), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 32/150 (21%), Positives = 53/150 (35%), Gaps = 25/150 (16%)

Query: 4   GNVFMSCALEEAQNAALRNEI-P-VGAVAVLNNK----IISRAGNRNRELKDVTAHAEIL 57
            + FM+ AL  ++  A R    P VG + V ++     I+               HAE  
Sbjct: 15  DHRFMAAALRLSRRNAGRTSTNPSVGTLIVRDDGAGPMIVGTGVTAVGGR----PHAETE 70

Query: 58  AIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIE 111
           A+     +           YVTLEPC        CA A+  A + R+   +S+P      
Sbjct: 71  ALAEAGELA-----RGATAYVTLEPCAHHGRTPPCANALVNAGVARVVGASSDPDPRVSG 125

Query: 112 NGTQFYTLATCHHSPEIYPGISEQRSRQII 141
            G      A      E+   +   ++ + +
Sbjct: 126 KGYAILRAAG----IEVVEKVLAAQAAEQM 151


>gi|228476125|ref|ZP_04060833.1| ComE operon protein 2 [Staphylococcus hominis SK119]
 gi|314936291|ref|ZP_07843638.1| ComE operon protein 2 [Staphylococcus hominis subsp. hominis C80]
 gi|228269948|gb|EEK11428.1| ComE operon protein 2 [Staphylococcus hominis SK119]
 gi|313654910|gb|EFS18655.1| ComE operon protein 2 [Staphylococcus hominis subsp. hominis C80]
          Length = 154

 Score = 75.7 bits (186), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 28/116 (24%), Positives = 46/116 (39%), Gaps = 18/116 (15%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRE-------------- 46
           +K    FM+ +   A  +  +  + VGA  V +N+II+   N +                
Sbjct: 4   IKWDEYFMAQSHLLALRSTCQR-LSVGATIVKDNRIIAGGYNGSVAGEVHCIDVGCLIED 62

Query: 47  -LKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
                T HAE+ A+    +           +YVT  PC  C  +I  A I+++YY 
Sbjct: 63  DHCIRTIHAEMNALLQCAKQGVSSD--NATIYVTHFPCLNCTKSIIQAGIKKIYYA 116


>gi|322694880|gb|EFY86699.1| nucleoside deaminase [Metarhizium acridum CQMa 102]
          Length = 252

 Score = 75.7 bits (186), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 35/171 (20%), Positives = 55/171 (32%), Gaps = 43/171 (25%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLN-----NKIISRAGNRNRELKDVTA 52
           ++  + +M  A   A      N  P    G V V +      +++    N      + T 
Sbjct: 37  IETRHYWMRRA-NAALFEVTGNPCPTQAFGTVIVNHTAGGLGELVCIGANDV-ASGNPTL 94

Query: 53  HAEILAIRMGCRILSQEI-------------LPEVDLYVTLEPCTMCAAAISLARIRRLY 99
           H E  AI     IL+                  ++ LY   EPC MCA+AI  +  + L 
Sbjct: 95  HGETAAITNCSAILTDPNGPYKLSGHEALKAWADLTLYTNAEPCPMCASAIRWSGFKELV 154

Query: 100 YGASNPKGGGIENG----TQFYTLATCH----------HSPEIYPGISEQR 136
           +G       GI++      +  TL                  I  G+ E  
Sbjct: 155 FGT------GIKSLRAYNWKMMTLPAKDLFKYTTELPTGRTTIAGGVLENE 199


>gi|154482616|ref|ZP_02025064.1| hypothetical protein EUBVEN_00283 [Eubacterium ventriosum ATCC
           27560]
 gi|149736516|gb|EDM52402.1| hypothetical protein EUBVEN_00283 [Eubacterium ventriosum ATCC
           27560]
          Length = 163

 Score = 75.7 bits (186), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 39/136 (28%), Positives = 51/136 (37%), Gaps = 33/136 (24%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAV-LNNKIISRAGNR------------N 44
           +     FM  A   A  +      P   VGA  V  +NKI+S   N             N
Sbjct: 10  ISWDEYFMGVASLAALRSKD----PNTQVGACIVSDDNKILSMGYNGLPVGCSDDEFPWN 65

Query: 45  RELKDV-------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRR 97
           RE  D        T H+E+ AI           L    +YVTL PC  CA AI    I++
Sbjct: 66  RESDDPYDNKYFYTTHSELNAILN----YRGGSLEGAKIYVTLFPCNECAKAIIQCGIKK 121

Query: 98  LYYGASNPKGGGIENG 113
           + YG  + K G   + 
Sbjct: 122 VIYG--DDKYGDTSSV 135


>gi|168704914|ref|ZP_02737191.1| riboflavin biosynthesis protein RibD [Gemmata obscuriglobus UQM
           2246]
          Length = 355

 Score = 75.7 bits (186), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 32/142 (22%), Positives = 49/142 (34%), Gaps = 22/142 (15%)

Query: 8   MSCALEEAQNAALRNEI-P-VGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           M  AL  A       E  P VGAV +    K +    ++         HAE+ A++    
Sbjct: 1   MRHALALAARGRGAVEPNPMVGAVVLDPTGKPVGEGWHQKFGG----PHAEVFALQAAGA 56

Query: 65  ILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
                      L VTLEPC        C  A+  A + R+    ++P       G     
Sbjct: 57  -----RARGGTLLVTLEPCCHHGKTPPCTDAVLRAGVARVVAAMADPFPRVAGGGLALLR 111

Query: 119 LATCHHSPEIYPGISEQRSRQI 140
            A      ++  G+ E  +R +
Sbjct: 112 AAG----VDVQVGLCEADARAL 129


>gi|187479427|ref|YP_787452.1| riboflavin biosynthesis protein [includes
           diaminohydroxyphosphoribosylaminopyrimidine deaminase
           and 5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Bordetella avium 197N]
 gi|115424014|emb|CAJ50567.1| riboflavin biosynthesis protein [includes:
           diaminohydroxyphosphoribosylaminopyrimidine deaminase
           and 5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Bordetella avium 197N]
          Length = 371

 Score = 75.7 bits (186), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 34/146 (23%), Positives = 52/146 (35%), Gaps = 20/146 (13%)

Query: 8   MSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           M  AL  A+        P   VG V V + +I+     +         HAE++A+R    
Sbjct: 1   MQRALGLAREVLYTT-TPNPRVGCVIVRDGQILGEGATQPPGGG----HAEVMALRAA-- 53

Query: 65  ILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
             +   L    +YVTLEPC        C  A+  A   R+     +P       G     
Sbjct: 54  RAAGHDLAGATVYVTLEPCSHFGRTPPCVDALVAAAPARVVVALGDPNPRVSGQGFARLR 113

Query: 119 LATCHHSPEIYPGISEQRSRQIIQDF 144
            A      E+  G+ E+ +  +   F
Sbjct: 114 AAG----VEVSSGVCEEEALALNPGF 135


>gi|94498080|ref|ZP_01304643.1| riboflavin biosynthesis protein RibD [Sphingomonas sp. SKA58]
 gi|94422515|gb|EAT07553.1| riboflavin biosynthesis protein RibD [Sphingomonas sp. SKA58]
          Length = 317

 Score = 75.7 bits (186), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 27/136 (19%), Positives = 46/136 (33%), Gaps = 24/136 (17%)

Query: 8   MSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           M+ A+  ++        P   VG + V + +++ R        K    HAE  A+     
Sbjct: 1   MAAAIALSRRGRGL-STPNPNVGCLIVRDGRVVGRGW----TQKGGRPHAEAQALDQAM- 54

Query: 65  ILSQEILPEVDLYVTLEPC-------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFY 117
               E   +   YVTLEPC         CA  ++ A + R+     +P       G  + 
Sbjct: 55  ----EQARDATAYVTLEPCFHLSPRGPRCADLLARAGVARVVIALRDPDPRTNGQGAAWL 110

Query: 118 TLATCHHSPEIYPGIS 133
                     +  G+ 
Sbjct: 111 RDRG----VAVEMGLL 122


>gi|294811515|ref|ZP_06770158.1| putative riboflavin/cytosine deaminase [Streptomyces clavuligerus
           ATCC 27064]
 gi|294324114|gb|EFG05757.1| putative riboflavin/cytosine deaminase [Streptomyces clavuligerus
           ATCC 27064]
          Length = 449

 Score = 75.7 bits (186), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 28/142 (19%), Positives = 44/142 (30%), Gaps = 25/142 (17%)

Query: 8   MSCALEEAQNAA---LRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
           M  A+E A         N + VG V    + +I     +          HAE+ A+R   
Sbjct: 71  MRRAIELAARGLGSTSPNPV-VGCVITDASGEIAGTGYHERAGG----PHAEVHALRAAG 125

Query: 64  RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFY 117
                        YVTLEPC        C+ A+  A I R+ +  ++P            
Sbjct: 126 -----TRARGGTAYVTLEPCDHTGRTGPCSQALLAAGITRVVHAVADPNPQASGGAGTLR 180

Query: 118 TLATCHHSPEIYPGISEQRSRQ 139
                     +  G+    +  
Sbjct: 181 AA-----GVRVECGLLGPEAEA 197


>gi|288800764|ref|ZP_06406221.1| cytidine/deoxycytidylate deaminase family protein [Prevotella sp.
           oral taxon 299 str. F0039]
 gi|288332225|gb|EFC70706.1| cytidine/deoxycytidylate deaminase family protein [Prevotella sp.
           oral taxon 299 str. F0039]
          Length = 143

 Score = 75.7 bits (186), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 30/110 (27%), Positives = 43/110 (39%), Gaps = 15/110 (13%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRN--------RELKDVT---- 51
              ++  A   A+N+       VGA+ V +  IIS   N           +   +T    
Sbjct: 12  DIRYLRMARIWAENSYCERRK-VGAIVVKDKMIISDGYNGTPEGFENVCEDSNQITKPYV 70

Query: 52  AHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
            HAE  AI    R  +        LYVT  PC  C+  I  + I+R+ YG
Sbjct: 71  LHAEANAITKLARSSNNS--EGATLYVTASPCIECSKLIIQSGIKRVVYG 118


>gi|161509817|ref|YP_001575476.1| competence protein ComEB [Staphylococcus aureus subsp. aureus
           USA300_TCH1516]
 gi|253732242|ref|ZP_04866407.1| competence protein ComEB [Staphylococcus aureus subsp. aureus
           USA300_TCH959]
 gi|253733160|ref|ZP_04867325.1| competence protein ComEB [Staphylococcus aureus subsp. aureus
           TCH130]
 gi|294848619|ref|ZP_06789365.1| ComE operon protein 2 [Staphylococcus aureus A9754]
 gi|295406712|ref|ZP_06816517.1| ComE operon protein 2 [Staphylococcus aureus A8819]
 gi|297207692|ref|ZP_06924127.1| competence protein ComEB [Staphylococcus aureus subsp. aureus ATCC
           51811]
 gi|297245706|ref|ZP_06929571.1| ComE operon protein 2 [Staphylococcus aureus A8796]
 gi|300911773|ref|ZP_07129216.1| competence protein ComEB [Staphylococcus aureus subsp. aureus
           TCH70]
 gi|304380821|ref|ZP_07363481.1| ComE operon protein ComEB [Staphylococcus aureus subsp. aureus ATCC
           BAA-39]
 gi|160368626|gb|ABX29597.1| possible competence protein ComEB [Staphylococcus aureus subsp.
           aureus USA300_TCH1516]
 gi|253724031|gb|EES92760.1| competence protein ComEB [Staphylococcus aureus subsp. aureus
           USA300_TCH959]
 gi|253728916|gb|EES97645.1| competence protein ComEB [Staphylococcus aureus subsp. aureus
           TCH130]
 gi|294824645|gb|EFG41068.1| ComE operon protein 2 [Staphylococcus aureus A9754]
 gi|294968459|gb|EFG44483.1| ComE operon protein 2 [Staphylococcus aureus A8819]
 gi|296887709|gb|EFH26607.1| competence protein ComEB [Staphylococcus aureus subsp. aureus ATCC
           51811]
 gi|297177357|gb|EFH36609.1| ComE operon protein 2 [Staphylococcus aureus A8796]
 gi|300886019|gb|EFK81221.1| competence protein ComEB [Staphylococcus aureus subsp. aureus
           TCH70]
 gi|304340548|gb|EFM06482.1| ComE operon protein ComEB [Staphylococcus aureus subsp. aureus ATCC
           BAA-39]
 gi|320140525|gb|EFW32379.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus MRSA131]
 gi|320144063|gb|EFW35832.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus MRSA177]
          Length = 156

 Score = 75.7 bits (186), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 29/116 (25%), Positives = 46/116 (39%), Gaps = 18/116 (15%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRE-------------- 46
           +K    FM+ +   A  +  +  + VGA  V +N+II+   N +                
Sbjct: 7   IKWEEYFMAQSHLLALRSTCQR-LSVGATIVKDNRIIAGGYNGSVAGEVHCIDEGCLIED 65

Query: 47  -LKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
                T HAE+ A+    +           +YVT  PC  C  +I  A I+R+YY 
Sbjct: 66  GHCIRTIHAEMNALLQCAKQGVST--EGATIYVTHFPCLNCTKSIIQAGIKRIYYA 119


>gi|57505260|ref|ZP_00371189.1| riboflavin biosynthesis protein (ribG) [Campylobacter upsaliensis
           RM3195]
 gi|57016396|gb|EAL53181.1| riboflavin biosynthesis protein (ribG) [Campylobacter upsaliensis
           RM3195]
          Length = 327

 Score = 75.7 bits (186), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 43/177 (24%), Positives = 67/177 (37%), Gaps = 44/177 (24%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAV-LNNKIIS-RAGNRNRELKDVTAHAE 55
           MK    +M+ AL+EA         P   VG V +  NN+I+S +A       K   AHAE
Sbjct: 1   MK--EFYMNLALKEAWK-YQFLTYPNPAVGCVILDKNNQILSIKAH-----EKQGEAHAE 52

Query: 56  ILAIRMGCRILSQEI--------------------LPEVDLYVTLEPC------TMCAAA 89
           + AI+   ++L  E                     L     +VTLEPC        CA  
Sbjct: 53  LNAIKEALKVLKPEFNFPKEPNVLHEFILTNHQKLLQNATAFVTLEPCVHQGKTPPCAKL 112

Query: 90  ISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
            S    ++++    +        G +F           +  GI E+  R++++ F K
Sbjct: 113 FSTLEFKKVFVSVKDENQIASG-GAEFLRQKGIL----VEMGILEKEGRELLKPFLK 164


>gi|268611449|ref|ZP_06145176.1| putative Cytidine/deoxycytidylate deaminase, zinc-binding region
           (CMP/dCMP deaminase, zinc-binding) protein [Ruminococcus
           flavefaciens FD-1]
          Length = 210

 Score = 75.7 bits (186), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 31/145 (21%), Positives = 60/145 (41%), Gaps = 17/145 (11%)

Query: 14  EAQNAALRNEIPVGAVAV-LNNKIISRAGNR-NRELKDV-TAHAEILAIRMGCRILSQEI 70
           EA +A     +P GAV       +++ + N       +  T+H+ I AI     + + E 
Sbjct: 15  EAWDAMKSGSVPSGAVIYDREGNLLAESHNGFKNTDVNPYTSHSCINAINQLS-LRNVES 73

Query: 71  LPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYP 130
              + +Y ++EPC MC  AI+++ I+ ++  + +   G   +      L   + S     
Sbjct: 74  NSGLTIYSSMEPCFMCLGAIAISNIKEIHSASRDLFYGAAHHLYDDAALIAKNISF---- 129

Query: 131 GISEQRSRQI------IQDFFKERR 149
                 S  I      +Q +F+ +R
Sbjct: 130 ---HSESGDIEFFQIVLQSYFEVKR 151


>gi|191638477|ref|YP_001987643.1| ComE operon protein 2 [Lactobacillus casei BL23]
 gi|227535031|ref|ZP_03965080.1| competence protein ComEB [Lactobacillus paracasei subsp. paracasei
           ATCC 25302]
 gi|239631434|ref|ZP_04674465.1| ComE operon protein 2 [Lactobacillus paracasei subsp. paracasei
           8700:2]
 gi|301066532|ref|YP_003788555.1| comE operon protein 2 [Lactobacillus casei str. Zhang]
 gi|190712779|emb|CAQ66785.1| ComE operon protein 2 [Lactobacillus casei BL23]
 gi|227187346|gb|EEI67413.1| competence protein ComEB [Lactobacillus paracasei subsp. paracasei
           ATCC 25302]
 gi|239525899|gb|EEQ64900.1| ComE operon protein 2 [Lactobacillus paracasei subsp. paracasei
           8700:2]
 gi|300438939|gb|ADK18705.1| ComE operon protein 2 [Lactobacillus casei str. Zhang]
 gi|327382511|gb|AEA53987.1| Transcriptional regulator, TetR family protein [Lactobacillus casei
           LC2W]
 gi|327385708|gb|AEA57182.1| Transcriptional regulator, TetR family protein [Lactobacillus casei
           BD-II]
          Length = 153

 Score = 75.7 bits (186), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 27/114 (23%), Positives = 40/114 (35%), Gaps = 20/114 (17%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDV------------- 50
              F+  A + ++ +       VGAV V  ++II+   N      D              
Sbjct: 18  DQYFLELAEKVSERSTCERAT-VGAVLVQEHRIIATGYNGAIS-GDPHCDEAGHLMRDGH 75

Query: 51  ---TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
              T HAE+ AI                +YV   PC  C  A+  A I+R+ Y 
Sbjct: 76  CIRTIHAEMNAIIQCAANGVSTH--GATVYVNFFPCLNCTKALIQAGIKRVVYA 127


>gi|239978360|ref|ZP_04700884.1| putative riboflavin/cytosine deaminase [Streptomyces albus J1074]
 gi|291450256|ref|ZP_06589646.1| riboflavin biosynthesis protein RibD [Streptomyces albus J1074]
 gi|291353205|gb|EFE80107.1| riboflavin biosynthesis protein RibD [Streptomyces albus J1074]
          Length = 378

 Score = 75.7 bits (186), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 33/142 (23%), Positives = 46/142 (32%), Gaps = 25/142 (17%)

Query: 8   MSCALEEAQNAALR---NEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
           M  ALE A         N + VG V +  + +      +R         HAEI A+R   
Sbjct: 14  MRRALELAARGLGTTSPNPV-VGCVVLDAHGEQAGEGWHRRAGG----PHAEIHALREAG 68

Query: 64  RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFY 117
                +        VTLEPC        CA A+  A I R+ Y  ++P            
Sbjct: 69  -----DRARGGTALVTLEPCNHTGRTGPCAQALLDAGISRVVYAVADPDPLAEGGAATLR 123

Query: 118 TLATCHHSPEIYPGISEQRSRQ 139
                    E   G+    + Q
Sbjct: 124 AAGA-----ETSQGLLAAEAEQ 140


>gi|225419861|ref|ZP_03762164.1| hypothetical protein CLOSTASPAR_06202 [Clostridium asparagiforme
           DSM 15981]
 gi|225041485|gb|EEG51731.1| hypothetical protein CLOSTASPAR_06202 [Clostridium asparagiforme
           DSM 15981]
          Length = 195

 Score = 75.7 bits (186), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 36/126 (28%), Positives = 47/126 (37%), Gaps = 33/126 (26%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVL-NNKIISRAGN-------------- 42
           +     FM  A+   + +      P   VGA  V  +NKI+S   N              
Sbjct: 40  ITWDEYFMGVAILAGKRSKD----PSTQVGACIVSPDNKILSMGYNGFPKGCSDDEFPWE 95

Query: 43  RNRELKDV-------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARI 95
           R  E  D        + H+E+ AI           L    LYVTL PC  CA AI  A I
Sbjct: 96  RENEADDPYNAKYFYSTHSELNAILN----YRGGSLEGSKLYVTLFPCNECAKAIIQAGI 151

Query: 96  RRLYYG 101
           + + YG
Sbjct: 152 KTIVYG 157


>gi|49474161|ref|YP_032203.1| riboflavin biosynthesis protein ribD [Bartonella quintana str.
           Toulouse]
 gi|49239665|emb|CAF26036.1| Riboflavin biosynthesis protein ribD [Bartonella quintana str.
           Toulouse]
          Length = 365

 Score = 75.7 bits (186), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 30/143 (20%), Positives = 48/143 (33%), Gaps = 26/143 (18%)

Query: 8   MSCALEEAQNA-ALRNEIP-VGAVAVLNNK-----IISRAGNRNRELKDVTAHAEILAIR 60
           M+ A+  A+    L  E P VG +   N+      I+               HAE+ A+ 
Sbjct: 1   MAAAIRLAERHIGLTGENPSVGTIIARNDDSRGRCIVGYG----VTAIHGRPHAEVQALH 56

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           M        +      YVTLEPC        C  A+  + I R+    ++        G 
Sbjct: 57  MAG-----PLARGATAYVTLEPCSHYGKTLPCVNALINSGISRVVVALTDLDKRVDGRGI 111

Query: 115 QFYTLATCHHSPEIYPGISEQRS 137
                A      E+  G+  + +
Sbjct: 112 ALLRAAG----IEVVEGVLAEEA 130


>gi|269103261|ref|ZP_06155958.1| tRNA-specific adenosine-34 deaminase [Photobacterium damselae
           subsp. damselae CIP 102761]
 gi|268163159|gb|EEZ41655.1| tRNA-specific adenosine-34 deaminase [Photobacterium damselae
           subsp. damselae CIP 102761]
          Length = 71

 Score = 75.7 bits (186), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 16/55 (29%), Positives = 26/55 (47%)

Query: 95  IRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
           + ++ YGA + K G   +     + A  +H  +   G+ E   R  +Q FFK RR
Sbjct: 1   MGKVVYGAPDLKTGAAGSTMNLLSYAGVNHHVQFDAGLLEDECRAQLQAFFKRRR 55


>gi|145346176|ref|XP_001417569.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144577796|gb|ABO95862.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 147

 Score = 75.7 bits (186), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 40/151 (26%), Positives = 53/151 (35%), Gaps = 24/151 (15%)

Query: 8   MSCALEEAQNAALRNEIP---VGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
           M  ALE A  A      P   VG V V    + ++    +          HAE+ A+R  
Sbjct: 1   MRRALEVAATATTAETFPNPRVGCVVVDAREDVVVGEGYHPKAGE----PHAEVFALRAA 56

Query: 63  CRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116
             +           YVTLEPC        CA A+  A + R+  G  +P       G Q 
Sbjct: 57  GELA-----RGATAYVTLEPCNHYGRTPPCARALVDAGVARVVVGFIDPDPRVSGGGIQT 111

Query: 117 YTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
              A      E+  G  E   R+I  DF   
Sbjct: 112 LLDAG----IEVAVGCEEALCREINADFIAR 138


>gi|229552285|ref|ZP_04441010.1| competence protein ComEB [Lactobacillus rhamnosus LMS2-1]
 gi|229314357|gb|EEN80330.1| competence protein ComEB [Lactobacillus rhamnosus LMS2-1]
          Length = 170

 Score = 75.7 bits (186), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 27/114 (23%), Positives = 41/114 (35%), Gaps = 20/114 (17%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDV------------- 50
            + F+  A + ++ +       VGAV V  ++II+   N      D              
Sbjct: 34  DHYFLELAKKVSERSTCERAT-VGAVLVQEHRIIATGYNGAIS-GDPHCDEAGHLMRDGH 91

Query: 51  ---TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
              T HAE+ AI                +YV   PC  C  A+  A I+R+ Y 
Sbjct: 92  CIRTIHAEMNAIIQCAANGVSTH--GATVYVNFFPCLNCTKALIQAGIKRVVYA 143


>gi|312139593|ref|YP_004006929.1| diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase ribg [Rhodococcus equi 103S]
 gi|311888932|emb|CBH48245.1| diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase RibG [Rhodococcus equi 103S]
          Length = 336

 Score = 75.7 bits (186), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 31/159 (19%), Positives = 56/159 (35%), Gaps = 24/159 (15%)

Query: 1   MKKGNVFMSCALE--EAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEIL 57
           M   +  M  A++  EA   +     PVGAV +  +  ++       R       HAE++
Sbjct: 1   MTSLDAAMRLAIDASEAARGSTSPNPPVGAVILDASGAVVGVG--ATRPPGGP--HAEVV 56

Query: 58  AIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIE 111
           A+         E        VTLEPC        C+ A+  A I  ++Y  ++P      
Sbjct: 57  ALAAAG-----ERARGGTAVVTLEPCNHQGRTGPCSRALIDAGIAAVHYSVADPNPAAAG 111

Query: 112 NGTQFYTLATCHHSPEIYPGISEQRSRQ-IIQDFFKERR 149
                          E+  G+    + +  ++ +   +R
Sbjct: 112 GADTLRAA-----RIEVTGGLLADDAERGPLRAWLHRQR 145


>gi|283470867|emb|CAQ50078.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus ST398]
          Length = 153

 Score = 75.7 bits (186), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 29/116 (25%), Positives = 47/116 (40%), Gaps = 18/116 (15%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRE-------------- 46
           +K    FM+ +   A  +  +  + VGA  V +N+II+   N +                
Sbjct: 4   IKWEEYFMAQSHLLALRSTCQR-LSVGATIVKDNRIIAGGYNGSVAGEVHCIDEGCLIED 62

Query: 47  -LKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
                T HAE+ A+    +        +  +YVT  PC  C  +I  A I+R+YY 
Sbjct: 63  GHCIRTIHAEMNALLQCAKQGVST--EDATIYVTHFPCLNCTKSIIQAGIKRIYYA 116


>gi|319763925|ref|YP_004127862.1| riboflavin biosynthesis protein ribd [Alicycliphilus denitrificans
           BC]
 gi|317118486|gb|ADV00975.1| riboflavin biosynthesis protein RibD [Alicycliphilus denitrificans
           BC]
          Length = 370

 Score = 75.7 bits (186), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 40/156 (25%), Positives = 58/156 (37%), Gaps = 19/156 (12%)

Query: 1   MKKGNVFMSCALEEAQNAA-LRNEIP-VGAVAVLN-NKIISRAGNRNRELKDVTAHAEIL 57
           M     F++ AL  A  A  L N  P VG V       ++ +   +         HAE++
Sbjct: 1   MTDAAPFITQALGLAAQALFLSNPNPRVGCVIASGAGAVLGQGFTQQAGG----PHAEVV 56

Query: 58  AIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIE 111
           A+R      +         YVTLEPC        C  A+  A I R+     +P      
Sbjct: 57  ALRDAAASGNDVR--GATAYVTLEPCAHQGRTGPCCDALIQAGIGRVVASIEDPNPLVGG 114

Query: 112 NGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
            G  F  L       ++ PG   Q+SR++   FF  
Sbjct: 115 QG--FARLRAAGIDVQVGPG--AQQSRELNIGFFSR 146


>gi|299141063|ref|ZP_07034201.1| cytidine/deoxycytidylate deaminase family protein [Prevotella oris
           C735]
 gi|298578029|gb|EFI49897.1| cytidine/deoxycytidylate deaminase family protein [Prevotella oris
           C735]
          Length = 150

 Score = 75.7 bits (186), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 33/110 (30%), Positives = 42/110 (38%), Gaps = 15/110 (13%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRN--------RELKDVT---- 51
            N ++  A   A+N+       VGA+ V +  IIS   N           +    T    
Sbjct: 11  DNRYLRMARIWAENSYCLR-RQVGALVVKDKMIISDGYNGTPSGFDNVCEDANQATFPYV 69

Query: 52  AHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
            HAE  AI    R  +        LYVT  PC  CA  I  A IRR+ Y 
Sbjct: 70  LHAEANAITKLARSSNNSD--GSTLYVTASPCIECAKLIIQAGIRRVVYA 117


>gi|71019211|ref|XP_759836.1| hypothetical protein UM03689.1 [Ustilago maydis 521]
 gi|46099634|gb|EAK84867.1| hypothetical protein UM03689.1 [Ustilago maydis 521]
          Length = 260

 Score = 75.7 bits (186), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 33/130 (25%), Positives = 50/130 (38%), Gaps = 18/130 (13%)

Query: 25  PVGAVAVL--NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILP---------E 73
           P G   V   +N++I    NR     D T H EI AI+    +L ++ L           
Sbjct: 65  PFGTAIVNTTSNELICAIANRVGSTGDPTQHGEITAIQHCTNVLQRKGLSPQEILAAWKH 124

Query: 74  VDLYVTLEPCTMCAAAISLARIRRLYYG------ASNPKGG-GIENGTQFYTLATCHHSP 126
             LY   EPCTMC +AI  A  + + YG      A N +    I +        +  H+ 
Sbjct: 125 FSLYTNAEPCTMCLSAIRWAGFKEVIYGTSVRTIAENGRNQIYIPSNLVLEKSYSFGHAT 184

Query: 127 EIYPGISEQR 136
            +   +  + 
Sbjct: 185 LMLGNVLTEE 194


>gi|326780548|ref|ZP_08239813.1| riboflavin biosynthesis protein RibD [Streptomyces cf. griseus
           XylebKG-1]
 gi|326660881|gb|EGE45727.1| riboflavin biosynthesis protein RibD [Streptomyces cf. griseus
           XylebKG-1]
          Length = 366

 Score = 75.3 bits (185), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 29/142 (20%), Positives = 44/142 (30%), Gaps = 25/142 (17%)

Query: 8   MSCALEEAQNAA---LRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGC 63
           M  A+  A         N + VG V       +     ++         HAE+ A+    
Sbjct: 10  MRRAITLAARGLGSTSPNPV-VGCVITDAAGAVAGEGFHQRAGG----PHAEVHAL---- 60

Query: 64  RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFY 117
              +         YVTLEPC        C+ A+  A I R+ Y  ++P  G    G    
Sbjct: 61  -RAAGGRARGGTAYVTLEPCDHTGRTGPCSQALLAAGISRVVYAVADPNPGAAGGGDTL- 118

Query: 118 TLATCHHSPEIYPGISEQRSRQ 139
                H       G+    +  
Sbjct: 119 ----RHAGVRAEGGLLADEAEA 136


>gi|282877407|ref|ZP_06286230.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Prevotella buccalis ATCC 35310]
 gi|281300459|gb|EFA92805.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Prevotella buccalis ATCC 35310]
          Length = 146

 Score = 75.3 bits (185), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 33/110 (30%), Positives = 42/110 (38%), Gaps = 15/110 (13%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRN--------RELKDVTA--- 52
              ++  A   A+N+       VGA+ V  N IIS   N           +   VT    
Sbjct: 10  DQRYLRMARIWAENSYCHR-RQVGALVVKGNMIISDGYNGTPSGFDNVCEDENGVTHPYV 68

Query: 53  -HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
            HAE  AI    R  +        LYVT  PC  CA  I  A I+R+ Y 
Sbjct: 69  LHAEANAITKLARSSNNSD--GSTLYVTASPCIECAKLIIQAGIKRVVYA 116


>gi|15924579|ref|NP_372113.1| late competence operon required for DNA binding and uptake
           [Staphylococcus aureus subsp. aureus Mu50]
 gi|15927169|ref|NP_374702.1| late competence operon required for DNA binding and uptake comEB
           [Staphylococcus aureus subsp. aureus N315]
 gi|21283269|ref|NP_646357.1| late competence operon required for DNA binding and uptake comEB
           [Staphylococcus aureus subsp. aureus MW2]
 gi|49486423|ref|YP_043644.1| putative deaminase [Staphylococcus aureus subsp. aureus MSSA476]
 gi|82751191|ref|YP_416932.1| late competence deaminase protein [Staphylococcus aureus RF122]
 gi|151221703|ref|YP_001332525.1| competence protein ComEB required for DNA binding and uptake
           [Staphylococcus aureus subsp. aureus str. Newman]
 gi|156979907|ref|YP_001442166.1| late competence operon required for DNA binding and uptake
           [Staphylococcus aureus subsp. aureus Mu3]
 gi|255006374|ref|ZP_05144975.2| competence protein ComEB [Staphylococcus aureus subsp. aureus
           Mu50-omega]
 gi|257793665|ref|ZP_05642644.1| ComE operon protein 2 [Staphylococcus aureus A9781]
 gi|258411036|ref|ZP_05681316.1| competence protein ComEB [Staphylococcus aureus A9763]
 gi|258420161|ref|ZP_05683116.1| ComE operon protein 2 [Staphylococcus aureus A9719]
 gi|258424016|ref|ZP_05686898.1| ComE operon protein 2 [Staphylococcus aureus A9635]
 gi|258437420|ref|ZP_05689404.1| competence protein ComEB [Staphylococcus aureus A9299]
 gi|258443626|ref|ZP_05691965.1| competence protein ComEB [Staphylococcus aureus A8115]
 gi|258446834|ref|ZP_05694988.1| competence protein ComEB [Staphylococcus aureus A6300]
 gi|258448748|ref|ZP_05696860.1| competence protein ComEB [Staphylococcus aureus A6224]
 gi|258450583|ref|ZP_05698645.1| late competence operon required for DNA binding and uptake
           [Staphylococcus aureus A5948]
 gi|258453565|ref|ZP_05701543.1| late competence operon required for DNA binding and uptake
           [Staphylococcus aureus A5937]
 gi|262048588|ref|ZP_06021471.1| late competence operon required for DNA binding and uptake comEB
           [Staphylococcus aureus D30]
 gi|262051247|ref|ZP_06023471.1| late competence operon required for DNA binding and uptake comEB
           [Staphylococcus aureus 930918-3]
 gi|282893090|ref|ZP_06301324.1| ComE operon protein 2 [Staphylococcus aureus A8117]
 gi|282916859|ref|ZP_06324617.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus D139]
 gi|282920137|ref|ZP_06327862.1| ComE operon protein 2 [Staphylococcus aureus A9765]
 gi|282928222|ref|ZP_06335827.1| ComE operon protein 2 [Staphylococcus aureus A10102]
 gi|283770664|ref|ZP_06343556.1| dCMP deaminase [Staphylococcus aureus subsp. aureus H19]
 gi|296276607|ref|ZP_06859114.1| competence protein ComEB [Staphylococcus aureus subsp. aureus MR1]
 gi|13701387|dbj|BAB42681.1| late competence operon required for DNA binding and uptake comEB
           [Staphylococcus aureus subsp. aureus N315]
 gi|14247360|dbj|BAB57751.1| late competence operon required for DNA binding and uptake
           [Staphylococcus aureus subsp. aureus Mu50]
 gi|21204709|dbj|BAB95405.1| late competence operon required for DNA binding and uptake comEB
           [Staphylococcus aureus subsp. aureus MW2]
 gi|49244866|emb|CAG43327.1| putative deaminase [Staphylococcus aureus subsp. aureus MSSA476]
 gi|82656722|emb|CAI81150.1| late competence deaminase protein [Staphylococcus aureus RF122]
 gi|150374503|dbj|BAF67763.1| competence protein ComEB required for DNA binding and uptake
           [Staphylococcus aureus subsp. aureus str. Newman]
 gi|156722042|dbj|BAF78459.1| late competence operon required for DNA binding and uptake
           [Staphylococcus aureus subsp. aureus Mu3]
 gi|257787637|gb|EEV25977.1| ComE operon protein 2 [Staphylococcus aureus A9781]
 gi|257840186|gb|EEV64650.1| competence protein ComEB [Staphylococcus aureus A9763]
 gi|257843872|gb|EEV68266.1| ComE operon protein 2 [Staphylococcus aureus A9719]
 gi|257845637|gb|EEV69669.1| ComE operon protein 2 [Staphylococcus aureus A9635]
 gi|257848625|gb|EEV72613.1| competence protein ComEB [Staphylococcus aureus A9299]
 gi|257851032|gb|EEV74975.1| competence protein ComEB [Staphylococcus aureus A8115]
 gi|257854409|gb|EEV77358.1| competence protein ComEB [Staphylococcus aureus A6300]
 gi|257858026|gb|EEV80915.1| competence protein ComEB [Staphylococcus aureus A6224]
 gi|257861741|gb|EEV84540.1| late competence operon required for DNA binding and uptake
           [Staphylococcus aureus A5948]
 gi|257864296|gb|EEV87046.1| late competence operon required for DNA binding and uptake
           [Staphylococcus aureus A5937]
 gi|259160884|gb|EEW45904.1| late competence operon required for DNA binding and uptake comEB
           [Staphylococcus aureus 930918-3]
 gi|259163235|gb|EEW47794.1| late competence operon required for DNA binding and uptake comEB
           [Staphylococcus aureus D30]
 gi|269941078|emb|CBI49462.1| putative deaminase [Staphylococcus aureus subsp. aureus TW20]
 gi|282319346|gb|EFB49698.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus D139]
 gi|282590029|gb|EFB95111.1| ComE operon protein 2 [Staphylococcus aureus A10102]
 gi|282594485|gb|EFB99470.1| ComE operon protein 2 [Staphylococcus aureus A9765]
 gi|282764408|gb|EFC04534.1| ComE operon protein 2 [Staphylococcus aureus A8117]
 gi|283460811|gb|EFC07901.1| dCMP deaminase [Staphylococcus aureus subsp. aureus H19]
 gi|285817271|gb|ADC37758.1| dCMP deaminase; Late competence protein ComEB [Staphylococcus
           aureus 04-02981]
 gi|298694870|gb|ADI98092.1| dCMP deaminase [Staphylococcus aureus subsp. aureus ED133]
 gi|302751418|gb|ADL65595.1| late competence operon required for DNA binding and uptake comEB
           [Staphylococcus aureus subsp. aureus str. JKD6008]
 gi|312829976|emb|CBX34818.1| comE operon protein 2 [Staphylococcus aureus subsp. aureus ECT-R 2]
 gi|323438554|gb|EGA96301.1| late competence deaminase protein [Staphylococcus aureus O11]
 gi|323442793|gb|EGB00418.1| late competence deaminase protein [Staphylococcus aureus O46]
 gi|329314264|gb|AEB88677.1| Possible competence protein ComEB [Staphylococcus aureus subsp.
           aureus T0131]
 gi|329727571|gb|EGG64027.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus 21172]
 gi|329728343|gb|EGG64780.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus 21189]
 gi|329733117|gb|EGG69454.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus 21193]
          Length = 153

 Score = 75.3 bits (185), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 29/116 (25%), Positives = 46/116 (39%), Gaps = 18/116 (15%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRE-------------- 46
           +K    FM+ +   A  +  +  + VGA  V +N+II+   N +                
Sbjct: 4   IKWEEYFMAQSHLLALRSTCQR-LSVGATIVKDNRIIAGGYNGSVAGEVHCIDEGCLIED 62

Query: 47  -LKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
                T HAE+ A+    +           +YVT  PC  C  +I  A I+R+YY 
Sbjct: 63  GHCIRTIHAEMNALLQCAKQGVST--EGATIYVTHFPCLNCTKSIIQAGIKRIYYA 116


>gi|294672973|ref|YP_003573589.1| cytidine/deoxycytidylate deaminase zinc-binding domain-containing
           protein [Prevotella ruminicola 23]
 gi|294474140|gb|ADE83529.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein
           [Prevotella ruminicola 23]
          Length = 145

 Score = 75.3 bits (185), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 32/112 (28%), Positives = 46/112 (41%), Gaps = 15/112 (13%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRN--------RELKDVT-- 51
           K    ++  A   A+N+  +    VGA+ V +  IIS   N           +  +VT  
Sbjct: 10  KLDVRYLRMARIWAENSYCKR-RQVGALVVKDKMIISDGYNGTPSGFENVCEDDDNVTKP 68

Query: 52  --AHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
              HAE  AI    R  +        +Y+T  PC  CA  I  A I+R+ YG
Sbjct: 69  YVLHAEANAITKLARSNNNSD--GATIYITASPCIECAKLIIQAGIKRVVYG 118


>gi|326440097|ref|ZP_08214831.1| putative riboflavin/cytosine deaminase [Streptomyces clavuligerus
           ATCC 27064]
          Length = 388

 Score = 75.3 bits (185), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 28/142 (19%), Positives = 44/142 (30%), Gaps = 25/142 (17%)

Query: 8   MSCALEEAQNAA---LRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
           M  A+E A         N + VG V    + +I     +          HAE+ A+R   
Sbjct: 10  MRRAIELAARGLGSTSPNPV-VGCVITDASGEIAGTGYHERAGG----PHAEVHALRAAG 64

Query: 64  RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFY 117
                        YVTLEPC        C+ A+  A I R+ +  ++P            
Sbjct: 65  -----TRARGGTAYVTLEPCDHTGRTGPCSQALLAAGITRVVHAVADPNPQASGGAGTLR 119

Query: 118 TLATCHHSPEIYPGISEQRSRQ 139
                     +  G+    +  
Sbjct: 120 AA-----GVRVECGLLGPEAEA 136


>gi|53712256|ref|YP_098248.1| deoxycytidylate deaminase [Bacteroides fragilis YCH46]
 gi|60680433|ref|YP_210577.1| putative deoxycytidylate deaminase [Bacteroides fragilis NCTC 9343]
 gi|253563708|ref|ZP_04841165.1| deoxycytidylate deaminase [Bacteroides sp. 3_2_5]
 gi|265762444|ref|ZP_06091012.1| ComE operon protein 2 [Bacteroides sp. 2_1_16]
 gi|52215121|dbj|BAD47714.1| deoxycytidylate deaminase [Bacteroides fragilis YCH46]
 gi|60491867|emb|CAH06625.1| putative deoxycytidylate deaminase [Bacteroides fragilis NCTC 9343]
 gi|251947484|gb|EES87766.1| deoxycytidylate deaminase [Bacteroides sp. 3_2_5]
 gi|263255052|gb|EEZ26398.1| ComE operon protein 2 [Bacteroides sp. 2_1_16]
 gi|301161966|emb|CBW21510.1| putative deoxycytidylate deaminase [Bacteroides fragilis 638R]
          Length = 145

 Score = 75.3 bits (185), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 28/87 (32%), Positives = 36/87 (41%), Gaps = 14/87 (16%)

Query: 26  VGAVAVLNNKIISRAGNRN--------RELKDVT----AHAEILAIRMGCRILSQEILPE 73
           VGA+ V +  IIS   N           +  +VT     HAE  AI    R  +      
Sbjct: 33  VGALIVKDKMIISDGYNGTPSGFENVCEDDNNVTKPYVLHAEANAITKIARSNNSSD--G 90

Query: 74  VDLYVTLEPCTMCAAAISLARIRRLYY 100
             +YVT  PC  CA  I  A I+R+ Y
Sbjct: 91  ATMYVTASPCIECAKLIIQAGIKRVVY 117


>gi|123968996|ref|YP_001009854.1| putative diaminohydroxyphosphoribosylaminopyrimidine deaminase and
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Prochlorococcus marinus str. AS9601]
 gi|123199106|gb|ABM70747.1| putative Diaminohydroxyphosphoribosylaminopyrimidine deaminase and
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Prochlorococcus marinus str. AS9601]
          Length = 364

 Score = 75.3 bits (185), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 30/151 (19%), Positives = 53/151 (35%), Gaps = 22/151 (14%)

Query: 3   KGNVFMSCALEEAQNAALRNEI-P-VGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAI 59
               +M  A+  A          P VGAV +  N K+I+   +   +      HAE +A 
Sbjct: 7   SHIKWMKRAIFLASLGKNTTSPNPRVGAVIIDKNGKLIAEGFH--YKAGMP--HAEAMAF 62

Query: 60  RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113
               +           +YV LEPC        C   +  + I++ Y    +P       G
Sbjct: 63  NNLKK-----DPKGGSIYVNLEPCCHQGRTPPCVDKVISSGIKKAYISIEDPDARVAGKG 117

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
            +    A      +++ G+ ++ S  +   F
Sbjct: 118 IKLLEEAG----IQVHLGLCKKESLDLNNAF 144


>gi|67624625|ref|XP_668595.1| hypothetical protein [Cryptosporidium hominis TU502]
 gi|54659781|gb|EAL38344.1| hypothetical protein Chro.70174 [Cryptosporidium hominis]
          Length = 344

 Score = 75.3 bits (185), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 26/181 (14%), Positives = 59/181 (32%), Gaps = 57/181 (31%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           + F+  A +  + A      P G V  L  KI++   +          H+ + AI    +
Sbjct: 160 DKFVKLACKVGEFALSIGNPPRGCVITLKGKIVAIGEDNRNSDY-PWMHSVMKAIDNFSK 218

Query: 65  ILS---------------------------------------------QEILPEVDL--- 76
            +                                               +IL + +L   
Sbjct: 219 RVCSSSSSMPKMTNSLDSKIQDENQGSKNNEDHKDHLIEIQSKYSISEDQILSDSELKDQ 278

Query: 77  --------YVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEI 128
                   Y++ EPC  C+ A+  +RI +++Y   + + G + +  + + ++  +H   +
Sbjct: 279 YLCTNGIAYLSHEPCISCSMALVHSRISKVFYMYKDKERGFLGSNHKLHCVSELNHHYRV 338

Query: 129 Y 129
           +
Sbjct: 339 F 339


>gi|269856949|gb|ACZ51498.1| FCY1p [Cryptococcus heveanensis]
          Length = 231

 Score = 75.3 bits (185), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 34/151 (22%), Positives = 56/151 (37%), Gaps = 21/151 (13%)

Query: 6   VFMSCALEEAQNAALRN--EIPVGAVAVL--NNKIISRAGNRNRELKDVTAHAEILAIRM 61
            +M  A  EA  A      + P G+  V   ++++I    N+     +   H EI AI  
Sbjct: 42  HWMRVA-NEAVYADGHPCPQAPFGSAIVNTTSDELICVTSNKVGVTGNPAMHGEISAITH 100

Query: 62  GCRILSQEILP---------EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIE- 111
              +L+++ L          +  LY   EPC MCA+AI  A  + + YG S  K      
Sbjct: 101 CTDVLTKKGLSPQEILASWKDFSLYTNGEPCPMCASAIRWAGFKEVIYGTSIRKIAEHGR 160

Query: 112 ------NGTQFYTLATCHHSPEIYPGISEQR 136
                 +   +    +  H+  +   I    
Sbjct: 161 NQIYIPSSLVWEKSYSLGHATLMLGNILNNE 191


>gi|189500555|ref|YP_001960025.1| CMP/dCMP deaminase zinc-binding [Chlorobium phaeobacteroides BS1]
 gi|189495996|gb|ACE04544.1| CMP/dCMP deaminase zinc-binding [Chlorobium phaeobacteroides BS1]
          Length = 174

 Score = 75.3 bits (185), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 31/121 (25%), Positives = 44/121 (36%), Gaps = 27/121 (22%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGN--------------RNRELKD 49
              FMS A   ++ A       +GAV V +N I+S   N              R    K 
Sbjct: 29  HEYFMSVAHLISRRATCTRGH-IGAVLVRDNNILSTGYNGAPSGLPHCNETTCRIYSSKH 87

Query: 50  V----------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLY 99
                      T HAEI AI    +      + + D+Y+T  PC  C   +    I+ +Y
Sbjct: 88  PDGTVEENCVNTIHAEINAIAQAAKHGVS--IKDADIYITASPCIHCLKVLINVGIKTIY 145

Query: 100 Y 100
           Y
Sbjct: 146 Y 146


>gi|295428166|ref|ZP_06820798.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus EMRSA16]
 gi|297590868|ref|ZP_06949506.1| competence protein ComEB [Staphylococcus aureus subsp. aureus MN8]
 gi|295128524|gb|EFG58158.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus EMRSA16]
 gi|297575754|gb|EFH94470.1| competence protein ComEB [Staphylococcus aureus subsp. aureus MN8]
 gi|312437943|gb|ADQ77014.1| ComE operon protein ComEB [Staphylococcus aureus subsp. aureus
           TCH60]
          Length = 156

 Score = 75.3 bits (185), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 29/116 (25%), Positives = 46/116 (39%), Gaps = 18/116 (15%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRE-------------- 46
           +K    FM+ +   A  +  +  + VGA  V +N+II+   N +                
Sbjct: 7   IKWEEYFMAQSHLLALRSTCQR-LSVGATIVKDNRIIAGGYNGSVAGEVHCIDEGCLIED 65

Query: 47  -LKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
                T HAE+ A+    +           +YVT  PC  C  +I  A I+R+YY 
Sbjct: 66  GHCIRTIHAEMNALLQCAKQGVST--EGATIYVTHFPCLNCTKSIIQAGIKRIYYA 119


>gi|330823811|ref|YP_004387114.1| riboflavin biosynthesis protein RibD [Alicycliphilus denitrificans
           K601]
 gi|329309183|gb|AEB83598.1| riboflavin biosynthesis protein RibD [Alicycliphilus denitrificans
           K601]
          Length = 370

 Score = 75.3 bits (185), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 40/156 (25%), Positives = 58/156 (37%), Gaps = 19/156 (12%)

Query: 1   MKKGNVFMSCALEEAQNAA-LRNEIP-VGAVAVLN-NKIISRAGNRNRELKDVTAHAEIL 57
           M     F++ AL  A  A  L N  P VG V       ++ +   +         HAE++
Sbjct: 1   MTDAAPFITQALGLAAQALFLSNPNPRVGCVIASGAGAVLGQGFTQQAGG----PHAEVV 56

Query: 58  AIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIE 111
           A+R      +         YVTLEPC        C  A+  A I R+     +P      
Sbjct: 57  ALRDAAASGNDVR--GATAYVTLEPCAHQGRTGPCCDALIQAGIGRVVASIEDPNPLVGG 114

Query: 112 NGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
            G  F  L       ++ PG   Q+SR++   FF  
Sbjct: 115 QG--FARLRAAGIDVQVGPG--AQQSRELNIGFFSR 146


>gi|300781124|ref|ZP_07090978.1| riboflavin biosynthesis protein RibD [Corynebacterium genitalium
           ATCC 33030]
 gi|300532831|gb|EFK53892.1| riboflavin biosynthesis protein RibD [Corynebacterium genitalium
           ATCC 33030]
          Length = 361

 Score = 75.3 bits (185), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 36/150 (24%), Positives = 50/150 (33%), Gaps = 30/150 (20%)

Query: 9   SCALEEAQNAAL--RN----EIPVGAVAVL-------NN------KIISRAGNRNRELKD 49
             AL EA +A    R       PVG V          ++      +II+  G        
Sbjct: 13  ETALWEALDAGAEVRGTTSPNPPVGCVIYREVEPVIVDDWDQAEPEIIATGGTEPAGG-- 70

Query: 50  VTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGAS 103
              HAEI+A+      +  + L    + VTLEPC        CA AI  A I ++ Y   
Sbjct: 71  --RHAEIVALDAAREKVGDDGLRGACMLVTLEPCNHTGRTGPCAEAIVAAGIAKVVYIEP 128

Query: 104 NPKGGGIENGTQFYTLA-TCHHSPEIYPGI 132
           +P                  HH      G+
Sbjct: 129 DPNPEASGGAEYLRRHGVEVHHKTYDVTGL 158


>gi|159037490|ref|YP_001536743.1| riboflavin biosynthesis protein RibD [Salinispora arenicola
           CNS-205]
 gi|157916325|gb|ABV97752.1| riboflavin biosynthesis protein RibD [Salinispora arenicola
           CNS-205]
          Length = 353

 Score = 75.3 bits (185), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 27/142 (19%), Positives = 43/142 (30%), Gaps = 25/142 (17%)

Query: 8   MSCALEEAQNAALR---NEIPVGAVAVLNN-KIISRAGNRNRELKDVTAHAEILAIRMGC 63
           M  A+E A         N + VG V +    +++    +          HAEI+A+    
Sbjct: 10  MRRAVELAARGLGTTSPNPV-VGCVLLDPGGRVVGEGFHAYAGG----PHAEIVALAQAG 64

Query: 64  RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFY 117
                E        VTLEPC        C+ A+  A I R+     +P            
Sbjct: 65  -----ERARGGTAVVTLEPCDHTGRTGPCSTALVQAGIARVVIAVPDPNRAASGGAATLR 119

Query: 118 TLATCHHSPEIYPGISEQRSRQ 139
                     +  G+    +  
Sbjct: 120 AA-----GIRVDLGVRAAEAEA 136


>gi|167846242|ref|ZP_02471750.1| putative deaminase [Burkholderia pseudomallei B7210]
          Length = 71

 Score = 75.3 bits (185), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 12/50 (24%), Positives = 23/50 (46%)

Query: 100 YGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
           +GA +PK G   +    +  A  +H   +  G+       +++ FF +RR
Sbjct: 2   FGAPDPKTGACGSVVDAFADARLNHHTTVEGGVLADECGAVLKSFFAQRR 51


>gi|281424156|ref|ZP_06255069.1| cytidine/deoxycytidylate deaminase family protein [Prevotella oris
           F0302]
 gi|281401717|gb|EFB32548.1| cytidine/deoxycytidylate deaminase family protein [Prevotella oris
           F0302]
          Length = 159

 Score = 75.3 bits (185), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 33/110 (30%), Positives = 42/110 (38%), Gaps = 15/110 (13%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRN--------RELKDVT---- 51
            N ++  A   A+N+       VGA+ V +  IIS   N           +    T    
Sbjct: 20  DNRYLRMARIWAENSYCLR-RQVGALVVKDKMIISDGYNGTPSGFDNVCEDANQATFPYV 78

Query: 52  AHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
            HAE  AI    R  +        LYVT  PC  CA  I  A IRR+ Y 
Sbjct: 79  LHAEANAITKLARSSNNSD--GSTLYVTASPCIECAKLIIQAGIRRVVYA 126


>gi|70726327|ref|YP_253241.1| late competence operon required for DNA binding and uptake
           [Staphylococcus haemolyticus JCSC1435]
 gi|68447051|dbj|BAE04635.1| late competence operon required for DNA binding and uptake
           [Staphylococcus haemolyticus JCSC1435]
          Length = 152

 Score = 75.3 bits (185), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 28/116 (24%), Positives = 46/116 (39%), Gaps = 18/116 (15%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRE-------------- 46
           +K    FM+ +   A  +  +  + VGA  V +N+II+   N +                
Sbjct: 4   LKWDEYFMAQSHLLALRSTCQR-LSVGATIVKDNRIIAGGYNGSVAGEVHCIDEGCLIED 62

Query: 47  -LKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
                T HAE+ A+    +           +YVT  PC  C  +I  A I+++YY 
Sbjct: 63  GHCIRTIHAEMNALLQCAKQGVSTD--GATIYVTHFPCLNCTKSIIQAGIKQIYYA 116


>gi|285019507|ref|YP_003377218.1| hypothetical protein XALc_2747 [Xanthomonas albilineans GPE PC73]
 gi|283474725|emb|CBA17224.1| conserved hypothetical protein [Xanthomonas albilineans]
          Length = 186

 Score = 75.3 bits (185), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 33/146 (22%), Positives = 53/146 (36%), Gaps = 11/146 (7%)

Query: 10  CALEEAQNAALRN-EIPVGA-VAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
            A+E ++         P GA V   +++IIS   NR        AHAE +A  +  + L 
Sbjct: 33  LAVELSRLNLEAGSGGPFGAAVFGPDHRIISVGVNRVVPQTTSLAHAENMAYMLAQQRLQ 92

Query: 68  QEILPEV----DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC- 122
              L  V     L  + +PC  C  A   A I RL  GAS      +    +    A   
Sbjct: 93  SPRLNAVLSPVTLATSSQPCCQCYGATIWAGIDRLLIGASAEDVMALTTFDEGPLPADWV 152

Query: 123 ----HHSPEIYPGISEQRSRQIIQDF 144
                   E+   +    +  +++ +
Sbjct: 153 GELERRGIEVVRNLHRDAACAVLRRY 178


>gi|262341266|ref|YP_003284121.1| dCMP deaminase [Blattabacterium sp. (Blattella germanica) str. Bge]
 gi|262272603|gb|ACY40511.1| dCMP deaminase [Blattabacterium sp. (Blattella germanica) str. Bge]
          Length = 155

 Score = 75.3 bits (185), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 34/110 (30%), Positives = 46/110 (41%), Gaps = 15/110 (13%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRN--------RELKDVT--- 51
               +M  A+E+++ +  + +  VGAV V  N+IIS   NR          E   VT   
Sbjct: 10  DDIAYMKLAIEQSKLSFCKKKK-VGAVIVQKNQIISCGYNRTPSGFDNICEEKNGVTKWY 68

Query: 52  -AHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
             HAE  AI       S        +YVT  PC  C   I  + IRR+ Y
Sbjct: 69  VIHAEENAILK--LSSSSLSCKGASIYVTHFPCQECCKLIYQSTIRRVIY 116


>gi|315639223|ref|ZP_07894385.1| riboflavin biosynthesis protein RibD [Campylobacter upsaliensis
           JV21]
 gi|315480549|gb|EFU71191.1| riboflavin biosynthesis protein RibD [Campylobacter upsaliensis
           JV21]
          Length = 327

 Score = 75.3 bits (185), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 44/177 (24%), Positives = 67/177 (37%), Gaps = 44/177 (24%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAV-LNNKIIS-RAGNRNRELKDVTAHAE 55
           MK    +MS AL+EA         P   VG V +  NN+I+S +A       K   AHAE
Sbjct: 1   MK--EFYMSLALKEAWK-YQFLTYPNPAVGCVILDKNNQILSIKAH-----EKQGEAHAE 52

Query: 56  ILAIRMGCRILSQEI--------------------LPEVDLYVTLEPC------TMCAAA 89
           + AI+   ++L  E                     L     +VTLEPC        CA  
Sbjct: 53  LNAIKEALKLLKPEFNFPKEPNALHEFILTNHQKLLQNATAFVTLEPCAHQGKTPPCAKL 112

Query: 90  ISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
            S    ++++    +        G +F           +  GI E+  R++++ F K
Sbjct: 113 FSTLEFKKVFVSVKDENQIASG-GAEFLRQNGIL----VEMGILEKEGRELLKPFLK 164


>gi|298373394|ref|ZP_06983383.1| cytidine/deoxycytidylate deaminase family protein [Bacteroidetes
           oral taxon 274 str. F0058]
 gi|298274446|gb|EFI15998.1| cytidine/deoxycytidylate deaminase family protein [Bacteroidetes
           oral taxon 274 str. F0058]
          Length = 141

 Score = 75.3 bits (185), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 33/110 (30%), Positives = 43/110 (39%), Gaps = 15/110 (13%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRN--------RELKDVT---- 51
              +M  A   A+N+       VGA+ V +  IIS   N           +  + +    
Sbjct: 11  DERYMRMARIWAENSYCLRRK-VGALLVKDKMIISDGYNGTPSGFENCCEDEHNNSKPYV 69

Query: 52  AHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
            HAE  AI    R  +        LYVT  PC  CA  I  A IRR+ YG
Sbjct: 70  LHAEANAISKVARSNNSSD--GATLYVTASPCMECAKLIIQAGIRRVVYG 117


>gi|49483836|ref|YP_041060.1| deaminase [Staphylococcus aureus subsp. aureus MRSA252]
 gi|257425713|ref|ZP_05602137.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus 55/2053]
 gi|257428374|ref|ZP_05604772.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus 65-1322]
 gi|257431011|ref|ZP_05607391.1| competence protein ComEB [Staphylococcus aureus subsp. aureus
           68-397]
 gi|257433699|ref|ZP_05610057.1| competence protein ComEB [Staphylococcus aureus subsp. aureus
           E1410]
 gi|257436613|ref|ZP_05612657.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus M876]
 gi|282904170|ref|ZP_06312058.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus C160]
 gi|282905997|ref|ZP_06313852.1| competence protein ComEB [Staphylococcus aureus subsp. aureus
           Btn1260]
 gi|282908908|ref|ZP_06316726.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus
           WW2703/97]
 gi|282911226|ref|ZP_06319028.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus
           WBG10049]
 gi|282914395|ref|ZP_06322181.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus M899]
 gi|282919364|ref|ZP_06327099.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus C427]
 gi|282924689|ref|ZP_06332357.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus C101]
 gi|283958352|ref|ZP_06375803.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus
           A017934/97]
 gi|293503469|ref|ZP_06667316.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus 58-424]
 gi|293510486|ref|ZP_06669192.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus M809]
 gi|293531026|ref|ZP_06671708.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus M1015]
 gi|49241965|emb|CAG40660.1| putative deaminase [Staphylococcus aureus subsp. aureus MRSA252]
 gi|257271407|gb|EEV03553.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus 55/2053]
 gi|257275215|gb|EEV06702.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus 65-1322]
 gi|257278441|gb|EEV09077.1| competence protein ComEB [Staphylococcus aureus subsp. aureus
           68-397]
 gi|257281792|gb|EEV11929.1| competence protein ComEB [Staphylococcus aureus subsp. aureus
           E1410]
 gi|257283964|gb|EEV14087.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus M876]
 gi|282313524|gb|EFB43919.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus C101]
 gi|282317174|gb|EFB47548.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus C427]
 gi|282321576|gb|EFB51901.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus M899]
 gi|282324921|gb|EFB55231.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus
           WBG10049]
 gi|282327172|gb|EFB57467.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus
           WW2703/97]
 gi|282331289|gb|EFB60803.1| competence protein ComEB [Staphylococcus aureus subsp. aureus
           Btn1260]
 gi|282595788|gb|EFC00752.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus C160]
 gi|283790501|gb|EFC29318.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus
           A017934/97]
 gi|290920294|gb|EFD97360.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus M1015]
 gi|291095135|gb|EFE25400.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus 58-424]
 gi|291466850|gb|EFF09370.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus M809]
 gi|315195491|gb|EFU25878.1| putative deaminase [Staphylococcus aureus subsp. aureus CGS00]
          Length = 153

 Score = 75.3 bits (185), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 29/116 (25%), Positives = 46/116 (39%), Gaps = 18/116 (15%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRE-------------- 46
           +K    FM+ +   A  +  +  + VGA  V +N+II+   N +                
Sbjct: 4   IKWEEYFMAQSHLLALRSTCQR-LSVGATIVKDNRIIAGGYNGSVAGEVHCIDEGCLIED 62

Query: 47  -LKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
                T HAE+ A+    +           +YVT  PC  C  +I  A I+R+YY 
Sbjct: 63  GHCIRTIHAEMNALLQCAKQGVST--EGATIYVTHFPCLNCTKSIIQAGIKRIYYA 116


>gi|332527289|ref|ZP_08403353.1| 5-amino-6-(5-phosphoribosylamino) uracil reductase /
           diaminohydroxyphosphoribosylaminopyrimidine deaminase
           [Rubrivivax benzoatilyticus JA2]
 gi|332111705|gb|EGJ11686.1| 5-amino-6-(5-phosphoribosylamino) uracil reductase /
           diaminohydroxyphosphoribosylaminopyrimidine deaminase
           [Rubrivivax benzoatilyticus JA2]
          Length = 370

 Score = 75.3 bits (185), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 33/149 (22%), Positives = 53/149 (35%), Gaps = 21/149 (14%)

Query: 10  CALEEAQNA-ALRNEIP-VGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
            AL  A+ +  L +  P VG V   +  +++ R   +        AHAE++A+R      
Sbjct: 13  EALALAEGSIGLTDPNPRVGCVIGHDDGRVLGRGATQRAGQ----AHAEVMALRDAAAAG 68

Query: 67  SQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
                     +VTLEPC        C  A+  A I R+     +P       G      A
Sbjct: 69  HDTR--GATAWVTLEPCAHHGRTPPCCDALVAAGIARVVVAVGDPFPQVAGAGITRLRAA 126

Query: 121 TCHHSPEIYPGIS--EQRSRQIIQDFFKE 147
                 ++  G       +R++   FF  
Sbjct: 127 G----VQVELGDEDIAAAARELNIGFFSR 151


>gi|258648600|ref|ZP_05736069.1| cytidine/deoxycytidylate deaminase family protein [Prevotella
           tannerae ATCC 51259]
 gi|260851385|gb|EEX71254.1| cytidine/deoxycytidylate deaminase family protein [Prevotella
           tannerae ATCC 51259]
          Length = 145

 Score = 75.3 bits (185), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 31/110 (28%), Positives = 47/110 (42%), Gaps = 15/110 (13%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGN--------RNRELKDVT---- 51
            N ++  A   ++N+  +    VGA+ V +  IIS   N        +  +  ++T    
Sbjct: 11  DNRYLRMARIWSENSYCKR-RQVGALIVKDKMIISDGYNGTPSGFENQCEDELNITKPYV 69

Query: 52  AHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
            HAE  AI    R  +        LYVT  PC  C+  I  A I+R+ YG
Sbjct: 70  LHAEANAITKIARSGNNSD--GATLYVTDAPCIECSKLIIQAGIKRVIYG 117


>gi|21221143|ref|NP_626922.1| riboflavin-specific deaminase [Streptomyces coelicolor A3(2)]
 gi|289771571|ref|ZP_06530949.1| riboflavin biosynthesis protein RibD [Streptomyces lividans TK24]
 gi|8052397|emb|CAB92254.1| riboflavin-specific deaminase [Streptomyces coelicolor A3(2)]
 gi|289701770|gb|EFD69199.1| riboflavin biosynthesis protein RibD [Streptomyces lividans TK24]
          Length = 381

 Score = 75.3 bits (185), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 29/120 (24%), Positives = 43/120 (35%), Gaps = 18/120 (15%)

Query: 8   MSCALEEA-QNAALRNEIP-VGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           M  ALE A          P VG V +      ++   +R       T HAE+ A+R    
Sbjct: 1   MRRALELAGAEVGSTGSNPAVGCVLLDAEGTTVATGVHR----GPGTPHAEVDALRRA-- 54

Query: 65  ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
              +         VTLEPC        C+ A+  A +RR+ Y  ++P         +   
Sbjct: 55  ---RGRHRGTTAVVTLEPCDHQGRTGPCSKALIEAGVRRVLYAVADPNRVAAGGARRLAD 111


>gi|326331206|ref|ZP_08197500.1| riboflavin biosynthesis protein RibD [Nocardioidaceae bacterium
           Broad-1]
 gi|325950976|gb|EGD43022.1| riboflavin biosynthesis protein RibD [Nocardioidaceae bacterium
           Broad-1]
          Length = 352

 Score = 75.3 bits (185), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 26/124 (20%), Positives = 44/124 (35%), Gaps = 21/124 (16%)

Query: 26  VGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84
           VG V +  +  +I+   +R       T HAE+ A+                  VTLEPC 
Sbjct: 34  VGCVLLGADGSMIAEGYHR----GPGTPHAEVDALAKAGEAA-----RGATAVVTLEPCN 84

Query: 85  M------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSR 138
                  C+ A+  A + R+ Y  S+P                     E+  G+    +R
Sbjct: 85  HTGRTGPCSQALIEAGVARVVYAQSDPNPVAAGGAATLKQA-----GVEVEQGLYAAEAR 139

Query: 139 QIIQ 142
           ++ +
Sbjct: 140 ELNR 143


>gi|331212549|ref|XP_003307544.1| tRNA-specific adenosine deaminase subunit TAD2 [Puccinia graminis
           f. sp. tritici CRL 75-36-700-3]
 gi|309297947|gb|EFP74538.1| tRNA-specific adenosine deaminase subunit TAD2 [Puccinia graminis
           f. sp. tritici CRL 75-36-700-3]
          Length = 298

 Score = 75.3 bits (185), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 30/75 (40%), Positives = 40/75 (53%), Gaps = 4/75 (5%)

Query: 15  AQNAALRNEIPVGAVAVLN--NKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQE--I 70
           A  A + NEIPVG V V    +K++S+  NR  E K+   HAE  AI     +   +   
Sbjct: 159 ANEALVANEIPVGCVLVSKTTDKVLSKGRNRTNETKNACLHAEFDAIGGLHSVTPADKID 218

Query: 71  LPEVDLYVTLEPCTM 85
             +V LYVT+EPC M
Sbjct: 219 WNDVKLYVTVEPCLM 233


>gi|332880028|ref|ZP_08447712.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Capnocytophaga sp. oral taxon 329 str. F0087]
 gi|332682024|gb|EGJ54937.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Capnocytophaga sp. oral taxon 329 str. F0087]
          Length = 146

 Score = 75.3 bits (185), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 30/118 (25%), Positives = 46/118 (38%), Gaps = 17/118 (14%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKD------------VT 51
              +M  A+E A+ +  + +  VGA+ V +  IIS   N      D              
Sbjct: 13  DKAYMRMAMEWAKLSYSQRKQ-VGAIMVKDRMIISDGYNGTPTGFDNCCEDEEGNTHWFV 71

Query: 52  AHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY--GASNPKG 107
            HAE  AI                LY+T+ PC  C+  I  + I+R+ Y  G  + +G
Sbjct: 72  LHAEANAIMKVAASTQSS--QGATLYITMSPCKECSKLIYQSGIKRVVYKEGYRDNEG 127


>gi|299822872|ref|ZP_07054758.1| deoxycytidylate deaminase [Listeria grayi DSM 20601]
 gi|299816401|gb|EFI83639.1| deoxycytidylate deaminase [Listeria grayi DSM 20601]
          Length = 160

 Score = 75.3 bits (185), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 27/91 (29%), Positives = 38/91 (41%), Gaps = 17/91 (18%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKD---------------VTAHAEILAIRMGCRILSQEI 70
           VGA  V + +II+   N +    D                T HAE+ AI    +  +   
Sbjct: 28  VGATIVRDKRIIASGYNGSIAGGDHCTEHGCYIVDGHCIRTIHAEMNAILQCAKFGASTD 87

Query: 71  LPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
               +LYVT  PC  C  +I  A I+ +YYG
Sbjct: 88  --NAELYVTHFPCISCCKSIIQAGIKTVYYG 116


>gi|308484008|ref|XP_003104205.1| hypothetical protein CRE_01105 [Caenorhabditis remanei]
 gi|308258513|gb|EFP02466.1| hypothetical protein CRE_01105 [Caenorhabditis remanei]
          Length = 337

 Score = 74.9 bits (184), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 27/105 (25%), Positives = 50/105 (47%), Gaps = 7/105 (6%)

Query: 27  GAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEIL-PEVDLYVTLEPCTM 85
           G +AV +N ++S              H  +  +R   +    + L    D+++  EPC M
Sbjct: 213 GCIAVQSNSVLSSGC----PSTHPLGHPVMEMVRNLQKRTGSDYLGTGSDVFLVNEPCAM 268

Query: 86  CAAAISLARIRRLYYGASNPKGGGI-ENGTQFYTLATCHHSPEIY 129
           C+ A+   RI+RL+Y   N K G + ++G Q +   + +H  E++
Sbjct: 269 CSMALVHFRIKRLFY-VRNSKNGVLKDDGWQLHLEPSINHHYEVF 312


>gi|317402603|gb|EFV83165.1| riboflavin biosynthesis protein ribd [Achromobacter xylosoxidans
           C54]
          Length = 386

 Score = 74.9 bits (184), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 33/154 (21%), Positives = 50/154 (32%), Gaps = 18/154 (11%)

Query: 2   KKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
                +M  AL  AQ         P VG V V + +++     +         HAE+ A+
Sbjct: 8   SDDLSWMRRALALAQTVMYSTAPNPRVGCVIVRDGRVLGEGATQPPGG----PHAEVCAL 63

Query: 60  RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113
           R        E +    +YVTLEPC        C  A+  A   R+     +P       G
Sbjct: 64  RDAQAR--GESVAGATVYVTLEPCSHFGRTPPCVDALLAAAPARVVVAIGDPNPLVNGKG 121

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
                 A       +  GI  + +  +   F   
Sbjct: 122 LARLRQAG----IAVTTGICREEALALNAGFISR 151


>gi|300865185|ref|ZP_07110005.1| riboflavin biosynthesis protein [Oscillatoria sp. PCC 6506]
 gi|300336816|emb|CBN55155.1| riboflavin biosynthesis protein [Oscillatoria sp. PCC 6506]
          Length = 388

 Score = 74.9 bits (184), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 26/127 (20%), Positives = 42/127 (33%), Gaps = 17/127 (13%)

Query: 4   GNVFMSCALEEAQNAA-LRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
               M   +E A+ A       P VG+  V +  ++    +          HAE+ A+R 
Sbjct: 31  DAAMMRRCIELARCALGKTAPNPLVGSAIVRDGLVVGEGFH----PGAGMPHAEVFALRE 86

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
                         +YV LEPC        C+ A+  A + ++  G  +P       G  
Sbjct: 87  AGEKA-----LGATVYVNLEPCNHYGRTPPCSEALIAAGVAKVVVGMVDPNPLVSGGGIA 141

Query: 116 FYTLATC 122
               A  
Sbjct: 142 RLREAGI 148


>gi|50554041|ref|XP_504429.1| YALI0E26543p [Yarrowia lipolytica]
 gi|49650298|emb|CAG80030.1| YALI0E26543p [Yarrowia lipolytica]
          Length = 357

 Score = 74.9 bits (184), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 33/161 (20%), Positives = 60/161 (37%), Gaps = 37/161 (22%)

Query: 10  CALEEAQNAALRNEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAI-RMGCRIL 66
            AL +A +     E+PV  + V     +++SR  +   +  +   H  + AI  +  + L
Sbjct: 187 IALSKANSGTK--ELPVATLIVDPKTGEVLSRKLDTRHKQGNPLNHCTMEAIAEIASQEL 244

Query: 67  S-------------------------QEILPEV---DLYVTLEPCTMCAAAISLARIRRL 98
           +                          + L       +Y T EPC MCA A++ +R+ RL
Sbjct: 245 ARRQERGTSKQEREREGKQETIDGEEDDRLYLCLEMHVYTTHEPCPMCAMALNHSRVGRL 304

Query: 99  YYGASNPKGGGI----ENGTQFYTLATCHHSPEIYPGISEQ 135
            Y  S+P  GGI          +     +   E++  + + 
Sbjct: 305 VYVESSPGSGGIEPNSGGSHGIHWNPQLNWKYEVWKWVGDD 345


>gi|15827206|ref|NP_301469.1| bifunctional riboflavin-specific deaminase/reductase [Mycobacterium
           leprae TN]
 gi|221229684|ref|YP_002503100.1| putative bifunctional riboflavin-specific deaminase/reductase
           [Mycobacterium leprae Br4923]
 gi|13092754|emb|CAC30063.1| putative bifunctional riboflavin-specific deaminase/reductase
           [Mycobacterium leprae]
 gi|219932791|emb|CAR70648.1| putative bifunctional riboflavin-specific deaminase/reductase
           [Mycobacterium leprae Br4923]
          Length = 339

 Score = 74.9 bits (184), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 30/137 (21%), Positives = 50/137 (36%), Gaps = 23/137 (16%)

Query: 8   MSCALEEAQ--NAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           M  A+E++     A     PVGAV V  + +++               HAE++A+R    
Sbjct: 13  MRLAVEQSYLVKGATYPNPPVGAVIVDPDGRVVGVGATEPAGGD----HAEVVALRSAGV 68

Query: 65  ILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
                        VTLEPC        C  A+  A++ ++ Y  ++P         +  T
Sbjct: 69  TA-----AGAIAVVTLEPCNHYGKTPPCVNALLEAKVDKVAYAIADPNASAGGGAARL-T 122

Query: 119 LATCHHSPEIYPGISEQ 135
            A  H    +  G+   
Sbjct: 123 AAGVH----VQSGVLAD 135


>gi|294635299|ref|ZP_06713797.1| riboflavin biosynthesis protein RibD [Edwardsiella tarda ATCC
           23685]
 gi|291091308|gb|EFE23869.1| riboflavin biosynthesis protein RibD [Edwardsiella tarda ATCC
           23685]
          Length = 319

 Score = 74.9 bits (184), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 27/103 (26%), Positives = 38/103 (36%), Gaps = 15/103 (14%)

Query: 53  HAEILAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPK 106
           HAE+ A+RM       E       YVTLEPC        CA A+  A + R+     +P 
Sbjct: 2   HAEVHALRMAG-----ERARGATAYVTLEPCSHHGRTPPCADALVAAGVSRVVAAMQDPN 56

Query: 107 GGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
                 G      A      E+  G+    +  + + F K  R
Sbjct: 57  PHVAGRGLYRLQQAG----IEVRHGLMLAEAEAVNKGFLKRMR 95


>gi|118462896|ref|YP_882551.1| riboflavin biosynthesis protein RibD [Mycobacterium avium 104]
 gi|118164183|gb|ABK65080.1| riboflavin biosynthesis protein RibD [Mycobacterium avium 104]
          Length = 341

 Score = 74.9 bits (184), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 31/151 (20%), Positives = 53/151 (35%), Gaps = 22/151 (14%)

Query: 8   MSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M  A+E++           PVGAV +     +   G       D   HAEILA+R    +
Sbjct: 13  MRLAIEQSNQVKGNTYPNPPVGAVVLDGRGEVVGVGGTEPAGGD---HAEILALRRAGDL 69

Query: 66  LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
                     + VTLEPC        C  A+  A +  + Y  ++P         +    
Sbjct: 70  A-----AGGTVVVTLEPCNHHGKTPPCVDALLEAGVSTVVYAVADPNPQAAGGAGRLQEA 124

Query: 120 ATCHHSPEIYPGISEQR-SRQIIQDFFKERR 149
                   +  G+     S   ++++  ++R
Sbjct: 125 -----GVTVRSGLLADEVSGGPLREWLHKQR 150


>gi|78188600|ref|YP_378938.1| deoxycytidylate deaminase, putative [Chlorobium chlorochromatii
           CaD3]
 gi|78170799|gb|ABB27895.1| deoxycytidylate deaminase, putative [Chlorobium chlorochromatii
           CaD3]
          Length = 173

 Score = 74.9 bits (184), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 30/124 (24%), Positives = 42/124 (33%), Gaps = 27/124 (21%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGN------------------ 42
           +     FMS A   ++ A       +GAV V  N I+S   N                  
Sbjct: 21  LSWDEYFMSVAHLVSRRATCTRAH-IGAVIVRENNILSTGYNGAPTGLPHCHDDNCRIYR 79

Query: 43  ------RNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIR 96
                    E    T HAEI AI    +        + D+Y+T  PC  C   +    I+
Sbjct: 80  CTHPDGTVEENCVNTIHAEINAIAQAAKHGISIR--DSDIYITASPCIHCLKVLINVGIK 137

Query: 97  RLYY 100
            +YY
Sbjct: 138 TIYY 141


>gi|213961866|ref|ZP_03390132.1| cytidine/deoxycytidylate deaminase family protein [Capnocytophaga
           sputigena Capno]
 gi|213955655|gb|EEB66971.1| cytidine/deoxycytidylate deaminase family protein [Capnocytophaga
           sputigena Capno]
          Length = 146

 Score = 74.9 bits (184), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 30/121 (24%), Positives = 46/121 (38%), Gaps = 17/121 (14%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDV------------T 51
              +M  A+E A+ +  + +  VGA+ V +  IIS   N      D              
Sbjct: 13  DKAYMRMAMEWAKLSYSQRKQ-VGAIMVKDRMIISDGYNGTPTGFDNCCEDEEGNTHWYV 71

Query: 52  AHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY--GASNPKGGG 109
            HAE  AI                LY+T+ PC  C+  I  + I+R+ Y  G  + +G  
Sbjct: 72  LHAEANAIMKVASSTQSS--EGATLYITMSPCKECSKLIYQSGIKRVVYKEGYRDNEGLA 129

Query: 110 I 110
            
Sbjct: 130 F 130


>gi|145223918|ref|YP_001134596.1| CMP/dCMP deaminase, zinc-binding [Mycobacterium gilvum PYR-GCK]
 gi|145216404|gb|ABP45808.1| CMP/dCMP deaminase, zinc-binding protein [Mycobacterium gilvum
           PYR-GCK]
          Length = 163

 Score = 74.9 bits (184), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 25/102 (24%), Positives = 40/102 (39%), Gaps = 4/102 (3%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKII-SRAGNRNRELKDVTAHAEILAIRM 61
                +   +E A+ A    + P G++ +  + +      NR  +  D T H E  AI  
Sbjct: 12  DDLRHLRRCVELAREAQDAGDEPFGSLLLDADGVTRVEDRNRV-KDGDATRHPEY-AIAK 69

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
                         +Y + E C MCAAA +   + R+ Y AS
Sbjct: 70  WAVENLSPD-DRATVYTSGEHCPMCAAAHAWVGLGRVVYAAS 110


>gi|294655936|ref|XP_458164.2| DEHA2C11066p [Debaryomyces hansenii CBS767]
 gi|199430728|emb|CAG86235.2| DEHA2C11066p [Debaryomyces hansenii]
          Length = 384

 Score = 74.9 bits (184), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 35/160 (21%), Positives = 57/160 (35%), Gaps = 38/160 (23%)

Query: 11  ALEEAQNAALRNEIPVGAVAVLNNKIISR-----AGNRN------RELKDVTAHAEILAI 59
           ALEE Q A     IP  AV      II++       +                H+ + AI
Sbjct: 215 ALEEHQTAYDTG-IP--AV-----TIIAKKSKINGEHEILTVKFDNRDNHPLEHSVMKAI 266

Query: 60  R-------------------MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
                                  R     +  ++ +Y T EPC MC+ A+  +RI R+ Y
Sbjct: 267 DDIAMKEKIRRCDLHGTTLDNADRTDLNYLCHDLLVYTTHEPCIMCSMALVHSRIGRIIY 326

Query: 101 GASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140
               P+ GG+ +  Q       +   +I+  I E+   ++
Sbjct: 327 MKGVPETGGLSSNYQLGDRDGLNWKYDIWKWIGEEELSRL 366


>gi|193213074|ref|YP_001999027.1| CMP/dCMP deaminase zinc-binding [Chlorobaculum parvum NCIB 8327]
 gi|193086551|gb|ACF11827.1| CMP/dCMP deaminase zinc-binding [Chlorobaculum parvum NCIB 8327]
          Length = 194

 Score = 74.9 bits (184), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 25/113 (22%), Positives = 43/113 (38%), Gaps = 8/113 (7%)

Query: 8   MSCALEEAQNAALRN-EIPVGAVAVLN--NKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           M   +E A+         P  A    +   K++S   N          HAE++AI +  +
Sbjct: 33  MRFVIEAARRNIEEKTGGPFAAAVFEHETGKLVSLGVNLVVSRNSSILHAEMVAIMLAQQ 92

Query: 65  ILSQEILPE-----VDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN 112
            L    L +      +L  + EPC MC  A+  + ++ +  GA +     I  
Sbjct: 93  QLDTYDLGDPGMPAHELLSSAEPCAMCFGALPWSGVQYVATGAQSEDAKSIGF 145


>gi|169829293|ref|YP_001699451.1| ComE operon protein 2 [Lysinibacillus sphaericus C3-41]
 gi|168993781|gb|ACA41321.1| ComE operon protein 2 [Lysinibacillus sphaericus C3-41]
          Length = 189

 Score = 74.9 bits (184), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 30/118 (25%), Positives = 44/118 (37%), Gaps = 18/118 (15%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKD----------- 49
           +     FM+ +   A  +     + VGA  V + +II+   N +    +           
Sbjct: 4   ITWDQFFMAQSHLLALRSTCTR-LAVGATVVRDKRIIAGGYNGSITGDEHCIENGCYVVD 62

Query: 50  ----VTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
                T HAE+ A+   C           DLYVT  PC  C  +I  A I R+YY   
Sbjct: 63  NHCVRTVHAEMNALLQ-CAKYGTPT-KGADLYVTHFPCLPCTKSIIQAGIERVYYATD 118


>gi|328767788|gb|EGF77836.1| hypothetical protein BATDEDRAFT_27114 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 379

 Score = 74.9 bits (184), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 18/64 (28%), Positives = 35/64 (54%), Gaps = 1/64 (1%)

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
           L   +   +D+Y+T EPC MCA A+  +RI R++YG      G + +  + +   + +H 
Sbjct: 308 LEGYLCSGLDMYLTREPCAMCAMALVHSRIGRVFYGERRE-YGALGSAYKLHVHPSINHH 366

Query: 126 PEIY 129
            +++
Sbjct: 367 YQVF 370


>gi|256787680|ref|ZP_05526111.1| riboflavin-specific deaminase [Streptomyces lividans TK24]
          Length = 405

 Score = 74.9 bits (184), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 29/120 (24%), Positives = 43/120 (35%), Gaps = 18/120 (15%)

Query: 8   MSCALEEA-QNAALRNEIP-VGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           M  ALE A          P VG V +      ++   +R       T HAE+ A+R    
Sbjct: 25  MRRALELAGAEVGSTGSNPAVGCVLLDAEGTTVATGVHR----GPGTPHAEVDALRRA-- 78

Query: 65  ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
              +         VTLEPC        C+ A+  A +RR+ Y  ++P         +   
Sbjct: 79  ---RGRHRGTTAVVTLEPCDHQGRTGPCSKALIEAGVRRVLYAVADPNRVAAGGARRLAD 135


>gi|145219913|ref|YP_001130622.1| CMP/dCMP deaminase, zinc-binding [Prosthecochloris vibrioformis DSM
           265]
 gi|145206077|gb|ABP37120.1| CMP/dCMP deaminase, zinc-binding protein [Chlorobium
           phaeovibrioides DSM 265]
          Length = 180

 Score = 74.9 bits (184), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 31/121 (25%), Positives = 43/121 (35%), Gaps = 27/121 (22%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGN--------------------- 42
              FMS A   +Q A       +GAV V +N I+S   N                     
Sbjct: 29  HEYFMSVARLISQRATCTRGH-IGAVIVRDNNILSTGYNGAPSGLPHCNETNCRIYRSTH 87

Query: 43  ---RNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLY 99
                 E    T HAEI AI    +      + + D+Y+T  PC  C   +    I+ +Y
Sbjct: 88  PDGTVEENCVNTIHAEINAIAQAAKHGVS--IKDADIYITASPCIHCLKVLINVGIKTIY 145

Query: 100 Y 100
           Y
Sbjct: 146 Y 146


>gi|296271673|ref|YP_003654304.1| CMP/dCMP deaminase zinc-binding protein [Arcobacter nitrofigilis
           DSM 7299]
 gi|296095848|gb|ADG91798.1| CMP/dCMP deaminase zinc-binding protein [Arcobacter nitrofigilis
           DSM 7299]
          Length = 144

 Score = 74.9 bits (184), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 32/123 (26%), Positives = 50/123 (40%), Gaps = 29/123 (23%)

Query: 1   MKKGNVFMSCALEEAQNAA---LRNEIPVGAVAVLNNKIISRAGNRN------------- 44
           M     F++ A E A  +     +    VGAV V + +I+S   N               
Sbjct: 1   MISDKNFINIAHEIASASKCVSKQ----VGAVIVKDGRILSTGYNGTPAGYVNCKEHWND 56

Query: 45  ---RELKDVT----AHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRR 97
              +E  D +     HAE+ AI    R      +    +YVTLEPC+ C+  +  A I+R
Sbjct: 57  SYTKEHHDWSKTYEIHAEMNAIIWAARKGIS--IEGATIYVTLEPCSECSKNLIAAGIQR 114

Query: 98  LYY 100
           + +
Sbjct: 115 IVF 117


>gi|227529052|ref|ZP_03959101.1| competence protein ComEB [Lactobacillus vaginalis ATCC 49540]
 gi|227351064|gb|EEJ41355.1| competence protein ComEB [Lactobacillus vaginalis ATCC 49540]
          Length = 161

 Score = 74.9 bits (184), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 33/119 (27%), Positives = 46/119 (38%), Gaps = 22/119 (18%)

Query: 1   MKK----GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRE---------- 46
           MKK       FM  A   A  +     + VGAV V + +II+   N +            
Sbjct: 1   MKKRIDWDQYFMIQAALLASRSTCNR-LSVGAVLVRDKRIIAGGYNGSVSGDAHCIDDGC 59

Query: 47  -LKDV----TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
            L+D     T HAE+ AI    +           LYVT  PC  C  ++  A I+ + Y
Sbjct: 60  YLRDGHCVRTIHAEMNAILQCAKFGISTD--GASLYVTDFPCLQCTKSLLQAGIKEINY 116


>gi|269123684|ref|YP_003306261.1| CMP/dCMP deaminase zinc-binding protein [Streptobacillus
           moniliformis DSM 12112]
 gi|268315010|gb|ACZ01384.1| CMP/dCMP deaminase zinc-binding protein [Streptobacillus
           moniliformis DSM 12112]
          Length = 159

 Score = 74.9 bits (184), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 29/121 (23%), Positives = 42/121 (34%), Gaps = 30/121 (24%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPV---GAVAVLNNKIISRAGNRN-----------RE 46
           +     FM  A   A  +      PV   GA  V ++KI+    N              +
Sbjct: 7   LSWDEYFMGIAFLSANRSKD----PVTQVGACIVKDSKIVGIGYNGFPIGSSDDEVPWEK 62

Query: 47  LKDVTA-------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLY 99
             D          HAE+ AI     + S   L    +YVT  PC  CA +I    I ++ 
Sbjct: 63  DGDFLNTKYAYVVHAELNAI-----LNSNRDLKGSTIYVTHFPCNECAKSIIQTGISKVI 117

Query: 100 Y 100
           +
Sbjct: 118 F 118


>gi|213403097|ref|XP_002172321.1| diaminohydroxyphosphoribosylamino-pyrimidine deaminase
           [Schizosaccharomyces japonicus yFS275]
 gi|212000368|gb|EEB06028.1| diaminohydroxyphosphoribosylamino-pyrimidine deaminase
           [Schizosaccharomyces japonicus yFS275]
          Length = 147

 Score = 74.6 bits (183), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 28/132 (21%), Positives = 47/132 (35%), Gaps = 21/132 (15%)

Query: 4   GNVFMSCALEEAQN------AALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57
            + ++  AL+EA+       A       VG+V V N +++S   +R         HAE  
Sbjct: 2   HSKYLRLALDEAKKCNPTDTAFC-----VGSVIVENGQVVSTGYSRELPGN---THAEES 53

Query: 58  AIRMGCRILSQEILPEVDLYVTLEPC-------TMCAAAISLARIRRLYYGASNPKGGGI 110
           AI    +   +       +Y T+EPC         C   I   +  ++  G   P    +
Sbjct: 54  AILKLLQRDPKHDFTRSVIYSTMEPCSKRLSGNVPCTQHIIANKFHKVVLGCREPTTFVV 113

Query: 111 ENGTQFYTLATC 122
             G +    A  
Sbjct: 114 CEGVRQLQAAGI 125


>gi|188582604|ref|YP_001926049.1| riboflavin biosynthesis protein RibD [Methylobacterium populi
           BJ001]
 gi|179346102|gb|ACB81514.1| riboflavin biosynthesis protein RibD [Methylobacterium populi
           BJ001]
          Length = 359

 Score = 74.6 bits (183), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 32/141 (22%), Positives = 47/141 (33%), Gaps = 22/141 (15%)

Query: 8   MSCALEEAQNAALRN--EIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           M  AL   +    R      VGAV V  + +I+ +A            HAE LA+ M   
Sbjct: 1   MRLALALGRRNLGRTWPNPSVGAVVVTPDGRIVGQA----VTAPGGRPHAEPLALAMAGE 56

Query: 65  ILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
                      LYVTLEPC        C  A   + + R+     +P       G     
Sbjct: 57  AA-----RGATLYVTLEPCSHHGRTPPCTEATIRSGVARVVTAIEDPDPRVAGRGHAGLR 111

Query: 119 LATCHHSPEIYPGISEQRSRQ 139
            A       +  G+  + + +
Sbjct: 112 AAG----IAVETGLLREEAAR 128


>gi|288924860|ref|ZP_06418797.1| cytidine/deoxycytidylate deaminase family protein [Prevotella
           buccae D17]
 gi|315607887|ref|ZP_07882880.1| competence protein ComEB [Prevotella buccae ATCC 33574]
 gi|288338647|gb|EFC76996.1| cytidine/deoxycytidylate deaminase family protein [Prevotella
           buccae D17]
 gi|315250356|gb|EFU30352.1| competence protein ComEB [Prevotella buccae ATCC 33574]
          Length = 148

 Score = 74.6 bits (183), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 29/88 (32%), Positives = 36/88 (40%), Gaps = 14/88 (15%)

Query: 26  VGAVAVLNNKIISRAGNRN--------RELKDVT----AHAEILAIRMGCRILSQEILPE 73
           VGA+ V +  IIS   N           +   +T     HAE  AI    R  +      
Sbjct: 33  VGALVVKDKMIISDGYNGTPSGFENVCEDENHITKPYVLHAEANAITKLARSSNNSD--G 90

Query: 74  VDLYVTLEPCTMCAAAISLARIRRLYYG 101
             LYVT  PC  CA  I  A I+R+ YG
Sbjct: 91  STLYVTASPCIECAKLIIQAGIKRVVYG 118


>gi|257055601|ref|YP_003133433.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase
           /5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Saccharomonospora viridis DSM 43017]
 gi|256585473|gb|ACU96606.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase
           /5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Saccharomonospora viridis DSM 43017]
          Length = 349

 Score = 74.6 bits (183), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 30/154 (19%), Positives = 53/154 (34%), Gaps = 28/154 (18%)

Query: 8   MSCALEEAQNAALRNEI----PVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMG 62
           M  AL  A +A +R       PVGAV +    + +     +         HAE++A+R  
Sbjct: 15  MEVAL--ALSAGVRGNTSPNPPVGAVILDAEGRRVGTGATQPP----PGPHAEVVALREA 68

Query: 63  CRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116
                 E        VTLEPC        C  A+  A +  + Y  ++P         + 
Sbjct: 69  G-----ERARGGTAVVTLEPCSHHGRTPPCTQALLDAGVAAVRYAVADPHPAASGGAERL 123

Query: 117 YTLATCHHSPEIYPGISEQR-SRQIIQDFFKERR 149
                     ++  G+  +  +   ++ +    R
Sbjct: 124 RAA-----GVDVAGGVLAEEVASGPLRAWLHRER 152


>gi|283769499|ref|ZP_06342395.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Bulleidia extructa W1219]
 gi|283103767|gb|EFC05153.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Bulleidia extructa W1219]
          Length = 157

 Score = 74.6 bits (183), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 35/127 (27%), Positives = 50/127 (39%), Gaps = 32/127 (25%)

Query: 4   GNVFMSCALEEAQNAALRNEIP---VGAVAVLNN-KIISRAGN----------------- 42
            + FM  A   A  +      P   VGA  V  N +++S   N                 
Sbjct: 6   DSYFMGLAHLSALRSKD----PNTQVGAAIVDENHRVVSVGYNGLPRGCEDSDYPWSREG 61

Query: 43  RNRELKDV-TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
              E K     HAE+ AI     + S+  + +  +YV+L PC  CA AI  + IRR+ Y 
Sbjct: 62  NVLETKYPYVVHAELNAI-----LNSKWPVKDCTIYVSLFPCNECAKAIIQSGIRRVVY- 115

Query: 102 ASNPKGG 108
            S+   G
Sbjct: 116 ESDKYNG 122


>gi|282859489|ref|ZP_06268594.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Prevotella bivia JCVIHMP010]
 gi|282587717|gb|EFB92917.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Prevotella bivia JCVIHMP010]
          Length = 144

 Score = 74.6 bits (183), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 32/110 (29%), Positives = 44/110 (40%), Gaps = 15/110 (13%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRN--------RELKDVT---- 51
              ++  A   A+N+  +    VGA+ V +  IIS   N           +  ++T    
Sbjct: 9   DYRYLRMARIWAENSYCKR-RQVGALVVKDKMIISDGYNGTPSGFENVCEDDNNITKPYV 67

Query: 52  AHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
            HAE  AI    R  +        LYVT  PC  CA  I  A I+RL Y 
Sbjct: 68  LHAEANAITKLARSGNNS--EGSTLYVTASPCIECAKLIIQAGIKRLVYA 115


>gi|258539694|ref|YP_003174193.1| CMP/dCMP deaminase zinc-binding protein [Lactobacillus rhamnosus Lc
           705]
 gi|257151370|emb|CAR90342.1| CMP/dCMP deaminase, zinc-binding protein [Lactobacillus rhamnosus
           Lc 705]
 gi|328480168|gb|EGF49113.1| CMP/dCMP deaminase zinc-binding protein [Lactobacillus rhamnosus
           MTCC 5462]
          Length = 154

 Score = 74.6 bits (183), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 27/114 (23%), Positives = 41/114 (35%), Gaps = 20/114 (17%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDV------------- 50
            + F+  A + ++ +       VGAV V  ++II+   N      D              
Sbjct: 18  DHYFLELAKKVSERSTCERAT-VGAVLVQEHRIIATGYNGAIS-GDPHCDEAGHLMRDGH 75

Query: 51  ---TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
              T HAE+ AI                +YV   PC  C  A+  A I+R+ Y 
Sbjct: 76  CIRTIHAEMNAIIQCAANGVSTH--GATVYVNFFPCLNCTKALIQAGIKRVVYA 127


>gi|126696788|ref|YP_001091674.1| putative diaminohydroxyphosphoribosylaminopyrimidine deaminase and
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Prochlorococcus marinus str. MIT 9301]
 gi|126543831|gb|ABO18073.1| putative Diaminohydroxyphosphoribosylaminopyrimidine deaminase and
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Prochlorococcus marinus str. MIT 9301]
          Length = 364

 Score = 74.6 bits (183), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 30/151 (19%), Positives = 52/151 (34%), Gaps = 22/151 (14%)

Query: 3   KGNVFMSCALEEAQNAALRNEI-P-VGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAI 59
               +M  A+  A          P VGAV +  N  +IS   +     K    HAE +A 
Sbjct: 7   SHTKWMKRAIFLASLGKNTTSPNPRVGAVILDKNGSLISEGFH----FKAGMPHAEAMAF 62

Query: 60  RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113
                           +YV LEPC        C   +  + ++++Y    +P       G
Sbjct: 63  NNLKN-----DAKGGTMYVNLEPCCHQGKTPPCVDKVISSGLKKVYISMEDPDERVSGKG 117

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
            +    A      ++  G+ ++ S  + + F
Sbjct: 118 IKLLKEAG----IQVNLGLCKKESLDLNKAF 144


>gi|320335323|ref|YP_004172034.1| riboflavin biosynthesis protein RibD [Deinococcus maricopensis DSM
           21211]
 gi|319756612|gb|ADV68369.1| riboflavin biosynthesis protein RibD [Deinococcus maricopensis DSM
           21211]
          Length = 353

 Score = 74.6 bits (183), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 33/143 (23%), Positives = 51/143 (35%), Gaps = 21/143 (14%)

Query: 6   VFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
            FM  AL++A     R     PVG V V   +++ R  +          HAE+ A++   
Sbjct: 2   HFMHQALQQAALGLGRTAPNPPVGCVIVAGGEVVGRGFHPRAGQG----HAEVFALQDAG 57

Query: 64  RILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFY 117
                        YVTLEPC        CA A+  A + R+   A +P       G    
Sbjct: 58  -----VRARGATAYVTLEPCSHTGRTPPCADALIRAGVARVVVAALDPNPVVAGRGVARL 112

Query: 118 TLATCHHSPEIYPGISEQRSRQI 140
                 H  +++ G     + + 
Sbjct: 113 RT----HGLDVHVGPLADAAVRQ 131


>gi|255007771|ref|ZP_05279897.1| putative deoxycytidylate deaminase [Bacteroides fragilis 3_1_12]
 gi|313145475|ref|ZP_07807668.1| deoxycytidylate deaminase [Bacteroides fragilis 3_1_12]
 gi|313134242|gb|EFR51602.1| deoxycytidylate deaminase [Bacteroides fragilis 3_1_12]
          Length = 145

 Score = 74.6 bits (183), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 28/87 (32%), Positives = 36/87 (41%), Gaps = 14/87 (16%)

Query: 26  VGAVAVLNNKIISRAGNRN--------RELKDVT----AHAEILAIRMGCRILSQEILPE 73
           VGA+ V +  IIS   N           +  +VT     HAE  AI    R  +      
Sbjct: 33  VGALIVKDKMIISDGYNGTPSGFENICEDDNNVTKPYVLHAEANAITKIARSNNSSD--G 90

Query: 74  VDLYVTLEPCTMCAAAISLARIRRLYY 100
             +YVT  PC  CA  I  A I+R+ Y
Sbjct: 91  ATMYVTASPCIECAKLIIQAGIKRVVY 117


>gi|255693361|ref|ZP_05417036.1| cytidine/deoxycytidylate deaminase family protein [Bacteroides
           finegoldii DSM 17565]
 gi|260620838|gb|EEX43709.1| cytidine/deoxycytidylate deaminase family protein [Bacteroides
           finegoldii DSM 17565]
          Length = 149

 Score = 74.6 bits (183), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 31/109 (28%), Positives = 44/109 (40%), Gaps = 15/109 (13%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRN--------RELKDVT---- 51
              ++  A   A+N+  +    VGA+ V +  IIS   N           +  +VT    
Sbjct: 11  DKRYIRMASIWAENSYCQRRK-VGALIVKDKMIISDGYNGTPSGFENVCEDENNVTKPYV 69

Query: 52  AHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
            HAE  AI    R  +        +YVT  PC  CA  I  A I+R+ Y
Sbjct: 70  LHAEANAITKIARSNNSSD--GATMYVTASPCIECAKLIIQAGIKRVVY 116


>gi|315924110|ref|ZP_07920336.1| riboflavin biosynthesis protein RibD [Pseudoramibacter
           alactolyticus ATCC 23263]
 gi|315622512|gb|EFV02467.1| riboflavin biosynthesis protein RibD [Pseudoramibacter
           alactolyticus ATCC 23263]
          Length = 374

 Score = 74.6 bits (183), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 33/160 (20%), Positives = 54/160 (33%), Gaps = 39/160 (24%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNN-----------KIISRAGNRNRELKDVT 51
           +   FM  AL  A+                 N            +++   +         
Sbjct: 12  QAEAFMRRALALARQGMGH---------TSPNPMVGCVVVQNGVVVAEGYHERVGGY--- 59

Query: 52  AHAEILAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNP 105
            HAE  A+        ++ L + DLYVTLEPC        C   I    I R++ G+ + 
Sbjct: 60  -HAERNALT-----HCEKDLSDADLYVTLEPCCHYGKTPPCTEIIIERGIGRVFVGSLDV 113

Query: 106 KGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
                  G +    A      E+  GI E + R++ + F+
Sbjct: 114 NPKVAGRGVKILEAAG----IEVVTGILETKCRKLNEVFY 149


>gi|217969969|ref|YP_002355203.1| riboflavin biosynthesis protein RibD [Thauera sp. MZ1T]
 gi|217507296|gb|ACK54307.1| riboflavin biosynthesis protein RibD [Thauera sp. MZ1T]
          Length = 365

 Score = 74.6 bits (183), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 26/125 (20%), Positives = 42/125 (33%), Gaps = 19/125 (15%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC-- 83
           VG V V +   +    +         AHAE+ A+R                YVTLEPC  
Sbjct: 31  VGCVIVRDGTTVGEGWHARAGE----AHAEVHALRQAGAAARGAT-----AYVTLEPCSH 81

Query: 84  ----TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139
                 CA A+  A + R+     +P       G      +          G+  + +++
Sbjct: 82  FGRTPPCADALIEAGVARVIAAMEDPNPLVAGRGLARLRASG----IAAAHGLLAEAAQE 137

Query: 140 IIQDF 144
           +   F
Sbjct: 138 LNIGF 142


>gi|21673576|ref|NP_661641.1| deoxycytidylate deaminase, putative [Chlorobium tepidum TLS]
 gi|21646688|gb|AAM71983.1| deoxycytidylate deaminase, putative [Chlorobium tepidum TLS]
          Length = 175

 Score = 74.6 bits (183), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 30/121 (24%), Positives = 42/121 (34%), Gaps = 27/121 (22%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGN--------------------- 42
              FM  A   ++ A       VGAV V +N I+S   N                     
Sbjct: 30  HEYFMCVAHLISRRATCTRGH-VGAVIVRDNNILSTGYNGAPSGLPHCNETNCKIYRSIH 88

Query: 43  ---RNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLY 99
                 E    T HAEI AI    +      + + D+Y+T  PC  C   +    I+ +Y
Sbjct: 89  PDGTVEENCVNTIHAEINAIAQAAKHGVS--IKDADIYITASPCIHCLKVLINVGIKTIY 146

Query: 100 Y 100
           Y
Sbjct: 147 Y 147


>gi|15888505|ref|NP_354186.1| bifunctional riboflavin deaminase-reductase [Agrobacterium
           tumefaciens str. C58]
 gi|15156207|gb|AAK86971.1| bifunctional riboflavin deaminase-reductase [Agrobacterium
           tumefaciens str. C58]
          Length = 414

 Score = 74.6 bits (183), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 30/147 (20%), Positives = 47/147 (31%), Gaps = 21/147 (14%)

Query: 3   KGNVFMSCALEEA--QNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
               FM+ A+E +            VG V V + +II+ A            HAE  A+ 
Sbjct: 6   DDEKFMARAIEVSLRHQGQTLTNPSVGCVLVKDGQIIAEA----VTAIGGRPHAERQALE 61

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           +               YVTLEPC        CA A+    + R+     +P       G 
Sbjct: 62  IAGEAA-----RGATAYVTLEPCSHWGKTPPCANALVEYGVARVVVAVDDPDERVSGRGY 116

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQII 141
                A       +  G+     ++ +
Sbjct: 117 TILRDAG----IVVETGLLRDEGKRAL 139


>gi|297843134|ref|XP_002889448.1| hydrolase/ zinc ion binding protein [Arabidopsis lyrata subsp.
           lyrata]
 gi|297335290|gb|EFH65707.1| hydrolase/ zinc ion binding protein [Arabidopsis lyrata subsp.
           lyrata]
          Length = 400

 Score = 74.6 bits (183), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 18/71 (25%), Positives = 36/71 (50%)

Query: 72  PEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPG 131
              D+++ LEPC MCA A+   RI+R++Y   NP  GG+ +  +     + +H   ++  
Sbjct: 328 TGYDIFLLLEPCAMCAMALVHQRIKRIFYAFPNPTAGGLGSVHRLQGEKSLNHHYAVFRV 387

Query: 132 ISEQRSRQIIQ 142
           +    + + + 
Sbjct: 388 LLPDDALRQMT 398


>gi|114571043|ref|YP_757723.1| riboflavin biosynthesis protein RibD [Maricaulis maris MCS10]
 gi|114341505|gb|ABI66785.1| riboflavin biosynthesis protein RibD [Maricaulis maris MCS10]
          Length = 207

 Score = 74.6 bits (183), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 31/155 (20%), Positives = 46/155 (29%), Gaps = 23/155 (14%)

Query: 3   KGNVFMSCALEEAQ--NAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTA-HAEILAI 59
               +M  A+  A+           VG V V + +II+         +D    HAE +  
Sbjct: 5   DDARYMDLAVALARAQQGRTAPNPAVGCVLVRDGRIIATG-----ATQDGGRPHAERV-- 57

Query: 60  RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113
                  +         YVTLEPC        CA  +  A I R      +        G
Sbjct: 58  ---ALDAAGAEAAGATAYVTLEPCAHHGQTPPCADGLIQAGIERAVIACGDRFEQVSGRG 114

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKER 148
                 A       +  G+ E  +  +   FF   
Sbjct: 115 LAILAAAG----MTVETGLRETDATSLYAGFFSRL 145


>gi|28493654|ref|NP_787815.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Tropheryma
           whipplei str. Twist]
 gi|28476696|gb|AAO44784.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Tropheryma
           whipplei str. Twist]
          Length = 371

 Score = 74.6 bits (183), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 34/137 (24%), Positives = 63/137 (45%), Gaps = 24/137 (17%)

Query: 8   MSCALEEAQNAALRNEIP-VGAVAVLNN-KIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M  A+  AQ+  + +  P VG V +  + ++IS+  +        + HAEI+A+R    I
Sbjct: 16  MHRAITIAQHGPVFDRNPQVGCVILDRDYQLISQGWHM----GSGSEHAEIMALRGAKSI 71

Query: 66  LSQEILPEVDLYVTLEPCT------MCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
           LS+         +TLEPC+       C  A+  A ++ + +G  +P+     +G +  + 
Sbjct: 72  LSEPY----TAVITLEPCSSAGQTGPCVRALLDAGVKHVVFGVHDPE----SSGAKVLSE 123

Query: 120 ATCHHSPEIYPGISEQR 136
           A      +I  G+ E+ 
Sbjct: 124 AG----VKITYGVLERE 136


>gi|21673822|ref|NP_661887.1| cytidine and deoxycytidylate deaminase family protein [Chlorobium
           tepidum TLS]
 gi|21646954|gb|AAM72229.1| cytidine and deoxycytidylate deaminase family protein [Chlorobium
           tepidum TLS]
          Length = 194

 Score = 74.6 bits (183), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 28/135 (20%), Positives = 47/135 (34%), Gaps = 19/135 (14%)

Query: 23  EIPVGAVA--VLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPE-----VD 75
             P  A    + + +++S   N          HAE++AI +    L    L        +
Sbjct: 49  GGPFAAAVFEIESGRLVSLGVNLVLTQNSSILHAEMVAIVLAQMKLGAYDLGGFGMPAHE 108

Query: 76  LYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE-------- 127
           L  + EPC MC  A+  + +R L  GA +     I     F          E        
Sbjct: 109 LVTSTEPCVMCFGAVLWSGVRHLATGALSEDARAIG----FDEGPKPEKWIEELEARGIR 164

Query: 128 IYPGISEQRSRQIIQ 142
           +  G+    +R ++Q
Sbjct: 165 VTTGVERDTARDVLQ 179


>gi|299535731|ref|ZP_07049052.1| ComE operon protein 2 [Lysinibacillus fusiformis ZC1]
 gi|298728931|gb|EFI69485.1| ComE operon protein 2 [Lysinibacillus fusiformis ZC1]
          Length = 189

 Score = 74.6 bits (183), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 30/118 (25%), Positives = 44/118 (37%), Gaps = 18/118 (15%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKD----------- 49
           +     FM+ +   A  +     + VGA  V + +II+   N +    +           
Sbjct: 4   ITWDQFFMAQSHLLALRSTCTR-LAVGATVVRDKRIIAGGYNGSITGDEHCIEKGCYVVD 62

Query: 50  ----VTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
                T HAE+ A+   C           DLYVT  PC  C  +I  A I R+YY   
Sbjct: 63  NHCVRTVHAEMNALLQ-CAKYGTPT-KGADLYVTHFPCLPCTKSIIQAGIERVYYATD 118


>gi|222823268|ref|YP_002574841.1| riboflavin biosynthesis protein [Campylobacter lari RM2100]
 gi|222538489|gb|ACM63590.1| riboflavin biosynthesis protein [Campylobacter lari RM2100]
          Length = 330

 Score = 74.6 bits (183), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 39/175 (22%), Positives = 64/175 (36%), Gaps = 42/175 (24%)

Query: 3   KGNVFMSCALEEAQNAALRNEIP---VGAVAV-LNNKIIS-RAGNRNRELKDVTAHAEIL 57
               +M+ A++EA         P   VG V +  N KI+S +A       K   AHAE+ 
Sbjct: 2   NHEFYMNLAIDEAWK-YQFLTYPNPAVGCVILDKNGKILSIKAH--KEAGK---AHAELE 55

Query: 58  AIRMGCRIL--------------------SQEILPEVDLYVTLEPC------TMCAAAIS 91
           A+    + L                     Q +L     YV+LEPC        CA   S
Sbjct: 56  AVSKALKELDPNLDLPQDANDLHEFICKNHQGLLKGATAYVSLEPCNHQGKTPPCAKLFS 115

Query: 92  LARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
                 ++    +        G +F          ++  GI E+R++++++ F K
Sbjct: 116 ELGFSEVFIAIKDEHKLASG-GVEFLKSKG----IKVQIGICEKRAKELLKPFLK 165


>gi|297838959|ref|XP_002887361.1| hydrolase/ zinc ion binding protein [Arabidopsis lyrata subsp.
           lyrata]
 gi|297333202|gb|EFH63620.1| hydrolase/ zinc ion binding protein [Arabidopsis lyrata subsp.
           lyrata]
          Length = 400

 Score = 74.6 bits (183), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 19/71 (26%), Positives = 37/71 (52%)

Query: 72  PEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPG 131
              D+++ LEPCTMCA A+   RI+R++Y   NP  GG+ +  +     + +H   ++  
Sbjct: 328 TGYDIFLLLEPCTMCAMALVHQRIKRIFYAFPNPTAGGLGSVHRLQGEKSLNHHYAVFRV 387

Query: 132 ISEQRSRQIIQ 142
           +    + + + 
Sbjct: 388 LLPDDALRQMT 398


>gi|322821975|gb|EFZ28159.1| hypothetical protein TCSYLVIO_5619 [Trypanosoma cruzi]
          Length = 384

 Score = 74.6 bits (183), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 19/58 (32%), Positives = 37/58 (63%)

Query: 72  PEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIY 129
            E+DL+V+ EPC MC+ A+  +R+RR++Y  +NP  GG+ +    + + + +H   ++
Sbjct: 295 NEIDLFVSHEPCVMCSMALVHSRVRRVFYCFANPTHGGLGSVFSIHAIPSLNHHFRVF 352


>gi|294101414|ref|YP_003553272.1| CMP/dCMP deaminase zinc-binding protein [Aminobacterium colombiense
           DSM 12261]
 gi|293616394|gb|ADE56548.1| CMP/dCMP deaminase zinc-binding protein [Aminobacterium colombiense
           DSM 12261]
          Length = 168

 Score = 74.2 bits (182), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 36/133 (27%), Positives = 45/133 (33%), Gaps = 30/133 (22%)

Query: 4   GNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGN--------------RNREL 47
            + FM  A   A       R    VGAV V + +IIS   N                 +L
Sbjct: 9   DSYFMMIAAVAATRGTCLRRK---VGAVIVRDLQIISTGYNGAPKGLPHCSEVGCLRDKL 65

Query: 48  KDVTA---------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98
              +          HAEI AI     +          LY T EPC+ C  AI  A IRR+
Sbjct: 66  GIPSGERHEICRGSHAEINAIAQAAAV--GTRTEGAVLYCTHEPCSFCTKAIINAGIRRI 123

Query: 99  YYGASNPKGGGIE 111
            +    P     E
Sbjct: 124 VFVYPYPDALASE 136


>gi|291003622|ref|ZP_06561595.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Saccharopolyspora erythraea NRRL 2338]
          Length = 348

 Score = 74.2 bits (182), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 32/139 (23%), Positives = 48/139 (34%), Gaps = 21/139 (15%)

Query: 8   MSCALEEAQ--NAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M  A+  A+          PVG V VL+           R       HAE++A+R     
Sbjct: 17  MRTAIGAAEGVRGTTSPNPPVGCV-VLDAAGAVAGIGATRPPGGP--HAEVVALREAG-- 71

Query: 66  LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
              E        VTLEPC        C  A+  A + R+ +  S+P       G      
Sbjct: 72  ---ERARGGTAVVTLEPCSHTGRTPPCTDALLAAGVARVVHAVSDPMPVAAG-GADILRA 127

Query: 120 ATCHHSPEIYPGISEQRSR 138
           A      E++ G+  + + 
Sbjct: 128 AG----VEVHSGLLAEEAE 142


>gi|296129704|ref|YP_003636954.1| riboflavin biosynthesis protein RibD [Cellulomonas flavigena DSM
           20109]
 gi|296021519|gb|ADG74755.1| riboflavin biosynthesis protein RibD [Cellulomonas flavigena DSM
           20109]
          Length = 386

 Score = 74.2 bits (182), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 25/136 (18%), Positives = 42/136 (30%), Gaps = 18/136 (13%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  A   A+   L     VG V +     ++    +R       T HAE+ A+       
Sbjct: 40  MRHAFGLAEQGPLGPNPRVGCVLLDRAGAVVGEGWHR----GAGTPHAEVAAL--ADARE 93

Query: 67  SQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
               +      VTLEPC        C+ A+  A + R+     +P         +     
Sbjct: 94  RGADVRGATAVVTLEPCDHTGRTGPCSVALLQAGVGRVVVSVQDPNPVAAGGAQRLRAA- 152

Query: 121 TCHHSPEIYPGISEQR 136
                 ++  G+    
Sbjct: 153 ----GVDVVTGVLADE 164


>gi|199598395|ref|ZP_03211814.1| ComE operon protein 2 [Lactobacillus rhamnosus HN001]
 gi|258508483|ref|YP_003171234.1| CMP/dCMP deaminase [Lactobacillus rhamnosus GG]
 gi|199590714|gb|EDY98801.1| ComE operon protein 2 [Lactobacillus rhamnosus HN001]
 gi|257148410|emb|CAR87383.1| CMP/dCMP deaminase, zinc-binding protein [Lactobacillus rhamnosus
           GG]
 gi|259649793|dbj|BAI41955.1| competence protein [Lactobacillus rhamnosus GG]
          Length = 154

 Score = 74.2 bits (182), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 27/114 (23%), Positives = 41/114 (35%), Gaps = 20/114 (17%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDV------------- 50
            + F+  A + ++ +       VGAV V  ++II+   N      D              
Sbjct: 18  DHYFLELAKKVSERSTCERAT-VGAVLVQEHRIIATGYNGAIS-GDPHCDEAGHLMRDGH 75

Query: 51  ---TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
              T HAE+ AI                +YV   PC  C  A+  A I+R+ Y 
Sbjct: 76  CIRTIHAEMNAIIQCAANGVSTH--GATVYVNFFPCLNCTKALIQAGIKRVVYA 127


>gi|71653641|ref|XP_815455.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
 gi|70880510|gb|EAN93604.1| hypothetical protein, conserved [Trypanosoma cruzi]
          Length = 408

 Score = 74.2 bits (182), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 20/73 (27%), Positives = 40/73 (54%), Gaps = 3/73 (4%)

Query: 60  RMGCRILSQ---EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116
           +   R        +  E+DL+V+ EPC MC+ A+  +R+RR++Y  +NP  GG+ +    
Sbjct: 304 QQAQRWTKDNVPYLANEIDLFVSHEPCVMCSMALVHSRVRRVFYCFANPTHGGLGSVFSI 363

Query: 117 YTLATCHHSPEIY 129
           + + + +H   ++
Sbjct: 364 HAIPSLNHHFRVF 376


>gi|332883144|gb|EGK03427.1| hypothetical protein HMPREF9456_01494 [Dysgonomonas mossii DSM
           22836]
          Length = 149

 Score = 74.2 bits (182), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 31/109 (28%), Positives = 41/109 (37%), Gaps = 15/109 (13%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRN------------RELKDVT 51
              +M  A   A+N+  +    VGA+ V +  IIS   N               E K   
Sbjct: 10  DERYMRMAAIWAENSYCKRRK-VGALIVKDKMIISDGYNGTPSGFENICEDENNETKAYV 68

Query: 52  AHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
            HAE  AI       +  +     +YVT  PC  CA  I  A I R+ Y
Sbjct: 69  LHAEANAITKVACSHNSSL--GATMYVTTSPCIECAKLIIQAGITRVVY 115


>gi|325297264|ref|YP_004257181.1| CMP/dCMP deaminase zinc-binding protein [Bacteroides salanitronis
           DSM 18170]
 gi|324316817|gb|ADY34708.1| CMP/dCMP deaminase zinc-binding protein [Bacteroides salanitronis
           DSM 18170]
          Length = 144

 Score = 74.2 bits (182), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 32/110 (29%), Positives = 42/110 (38%), Gaps = 15/110 (13%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGN-------RNRELKDVTA---- 52
              +M  A   A+N+       VGA+ V +  IIS   N          E ++       
Sbjct: 12  DKRYMRMATIWAENSYCTRRK-VGALIVKDKMIISDGYNGTPAGFENVCEDENGLTKPYV 70

Query: 53  -HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
            HAE  AI    R  +        LYVT  PC  CA  I  A I+R+ Y 
Sbjct: 71  LHAEANAITKIARSNNSS--EGATLYVTASPCIECAKLIIQAGIKRVVYA 118


>gi|297734758|emb|CBI16992.3| unnamed protein product [Vitis vinifera]
          Length = 402

 Score = 74.2 bits (182), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 18/65 (27%), Positives = 31/65 (47%)

Query: 72  PEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPG 131
              D+Y+  EPC MCA A+   RIRR++Y   NP  G + +  +     + +H   ++  
Sbjct: 330 TGYDIYLVWEPCAMCAMALVHQRIRRIFYAFPNPNAGALGSVHRLQGEKSLNHHYAVFRV 389

Query: 132 ISEQR 136
              + 
Sbjct: 390 SLPEE 394


>gi|163847753|ref|YP_001635797.1| riboflavin biosynthesis protein RibD [Chloroflexus aurantiacus
           J-10-fl]
 gi|222525619|ref|YP_002570090.1| riboflavin biosynthesis protein RibD [Chloroflexus sp. Y-400-fl]
 gi|163669042|gb|ABY35408.1| riboflavin biosynthesis protein RibD [Chloroflexus aurantiacus
           J-10-fl]
 gi|222449498|gb|ACM53764.1| riboflavin biosynthesis protein RibD [Chloroflexus sp. Y-400-fl]
          Length = 391

 Score = 74.2 bits (182), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 33/108 (30%), Positives = 48/108 (44%), Gaps = 21/108 (19%)

Query: 9   SCALEEAQNAALRN----EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
             AL++A  AA+        PVGAV V + +++     +         HAE +A+     
Sbjct: 15  ELALQQA--AAVVGRTSPNPPVGAVVVRDGQVVGLGATQPAGG----PHAERIAL----- 63

Query: 65  ILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPK 106
             + E     DLY TLEPC        C  AI  A IRR+++ A +P 
Sbjct: 64  AAAGERARGADLYTTLEPCTFYGRTPPCTEAIIAAGIRRVFFIAHDPD 111


>gi|258621774|ref|ZP_05716805.1| conserved hypothetical protein [Vibrio mimicus VM573]
 gi|258626283|ref|ZP_05721130.1| conserved hypothetical protein [Vibrio mimicus VM603]
 gi|258581335|gb|EEW06237.1| conserved hypothetical protein [Vibrio mimicus VM603]
 gi|258586005|gb|EEW10723.1| conserved hypothetical protein [Vibrio mimicus VM573]
          Length = 110

 Score = 74.2 bits (182), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 20/70 (28%), Positives = 32/70 (45%)

Query: 46  ELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNP 105
           E  D TAHAE+ AIR  C+   +  L  + L  + EPC MC      + I ++ + A + 
Sbjct: 2   ENNDPTAHAEVEAIRDACKNTKKPHLRGLTLLASGEPCAMCYLNAMYSGISKVLFAADSN 61

Query: 106 KGGGIENGTQ 115
           +        +
Sbjct: 62  EAAVHGFDYR 71


>gi|257470169|ref|ZP_05634261.1| deoxycytidylate deaminase [Fusobacterium ulcerans ATCC 49185]
 gi|317064387|ref|ZP_07928872.1| deoxycytidylate deaminase [Fusobacterium ulcerans ATCC 49185]
 gi|313690063|gb|EFS26898.1| deoxycytidylate deaminase [Fusobacterium ulcerans ATCC 49185]
          Length = 163

 Score = 74.2 bits (182), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 35/122 (28%), Positives = 46/122 (37%), Gaps = 31/122 (25%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNK-IISRAGN-------------- 42
           ++    FM  AL  A+ +      P   VGA  V   + II    N              
Sbjct: 7   IEWDEYFMGVALLSAKRSKD----PNTQVGACIVNEERRIIGVGYNGLPKGCSDDEFPWE 62

Query: 43  RNRELKDV----TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98
           R  E  D       HAE+ AI     + S + L    LYV L PC  C+ AI  + I+ L
Sbjct: 63  REGEFLDTKYPFVCHAELNAI-----LNSTKTLKNCTLYVALFPCHECSKAIIQSGIKEL 117

Query: 99  YY 100
            Y
Sbjct: 118 VY 119


>gi|160887077|ref|ZP_02068080.1| hypothetical protein BACOVA_05093 [Bacteroides ovatus ATCC 8483]
 gi|237721349|ref|ZP_04551830.1| deoxycytidylate deaminase [Bacteroides sp. 2_2_4]
 gi|260171610|ref|ZP_05758022.1| deoxycytidylate deaminase [Bacteroides sp. D2]
 gi|293369429|ref|ZP_06616014.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Bacteroides ovatus SD CMC 3f]
 gi|299148576|ref|ZP_07041638.1| cytidine/deoxycytidylate deaminase family protein [Bacteroides sp.
           3_1_23]
 gi|315919924|ref|ZP_07916164.1| deoxycytidylate deaminase [Bacteroides sp. D2]
 gi|156107488|gb|EDO09233.1| hypothetical protein BACOVA_05093 [Bacteroides ovatus ATCC 8483]
 gi|229449145|gb|EEO54936.1| deoxycytidylate deaminase [Bacteroides sp. 2_2_4]
 gi|292635596|gb|EFF54103.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Bacteroides ovatus SD CMC 3f]
 gi|298513337|gb|EFI37224.1| cytidine/deoxycytidylate deaminase family protein [Bacteroides sp.
           3_1_23]
 gi|313693799|gb|EFS30634.1| deoxycytidylate deaminase [Bacteroides sp. D2]
          Length = 149

 Score = 74.2 bits (182), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 30/112 (26%), Positives = 46/112 (41%), Gaps = 15/112 (13%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRN--------RELKDVT- 51
           ++    ++  A   A+N+  +    VGA+ V +  IIS   N           +  ++T 
Sbjct: 8   LELDKRYIRMASIWAENSYCQRRK-VGALIVKDKMIISDGYNGTPSGFENVCEDENNLTK 66

Query: 52  ---AHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
               HAE  AI    R  +        +YVT  PC  CA  I  A I+R+ Y
Sbjct: 67  PYVLHAEANAITKIARSNNSSD--GATMYVTASPCIECAKLIIQAGIKRVVY 116


>gi|218201691|gb|EEC84118.1| hypothetical protein OsI_30450 [Oryza sativa Indica Group]
          Length = 411

 Score = 74.2 bits (182), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 20/79 (25%), Positives = 36/79 (45%), Gaps = 3/79 (3%)

Query: 51  TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI 110
            AH    AI          +    D+Y+  EPC+MCA A+   R +R++Y   NP  G +
Sbjct: 317 IAH---EAICDDLSETRPYLCTGFDIYLVWEPCSMCAMALVHQRFKRIFYAFPNPITGAL 373

Query: 111 ENGTQFYTLATCHHSPEIY 129
            +  + +   + +H   ++
Sbjct: 374 GSVYRLHGEKSLNHRYSVF 392


>gi|115478038|ref|NP_001062614.1| Os09g0128600 [Oryza sativa Japonica Group]
 gi|50252596|dbj|BAD28768.1| cytidine/deoxycytidylate deaminase-like protein [Oryza sativa
           Japonica Group]
 gi|50252628|dbj|BAD28798.1| cytidine/deoxycytidylate deaminase-like protein [Oryza sativa
           Japonica Group]
 gi|113630847|dbj|BAF24528.1| Os09g0128600 [Oryza sativa Japonica Group]
 gi|215694768|dbj|BAG89959.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|222641086|gb|EEE69218.1| hypothetical protein OsJ_28439 [Oryza sativa Japonica Group]
          Length = 411

 Score = 74.2 bits (182), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 20/79 (25%), Positives = 36/79 (45%), Gaps = 3/79 (3%)

Query: 51  TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI 110
            AH    AI          +    D+Y+  EPC+MCA A+   R +R++Y   NP  G +
Sbjct: 317 IAH---EAICDDLSETRPYLCTGFDIYLVWEPCSMCAMALVHQRFKRIFYAFPNPITGAL 373

Query: 111 ENGTQFYTLATCHHSPEIY 129
            +  + +   + +H   ++
Sbjct: 374 GSVYRLHGEKSLNHRYSVF 392


>gi|213416666|ref|ZP_03349810.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Salmonella enterica subsp. enterica serovar
           Typhi str. E01-6750]
          Length = 141

 Score = 74.2 bits (182), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 35/153 (22%), Positives = 53/153 (34%), Gaps = 21/153 (13%)

Query: 3   KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +   +M+ AL+ AQ      +  P VG V V N  I+    +          HAE+ A+R
Sbjct: 2   QDEFYMARALKLAQRGRFTTHPNPNVGCVIVNNGDIVGEGYHHRAGE----PHAEVHALR 57

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           M               YVTLEPC        C  A+  A + R+     +P       G 
Sbjct: 58  MAGAKAKGAT-----AYVTLEPCSHHGRTPPCCDALIAAGVARVVAAMQDPNPQVAGRGL 112

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
                A       +  G+    +  + + F K 
Sbjct: 113 YRLQQAG----IAVSHGLMMSEAEALNKGFLKR 141


>gi|225459965|ref|XP_002266270.1| PREDICTED: hypothetical protein, partial [Vitis vinifera]
          Length = 397

 Score = 74.2 bits (182), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 18/65 (27%), Positives = 31/65 (47%)

Query: 72  PEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPG 131
              D+Y+  EPC MCA A+   RIRR++Y   NP  G + +  +     + +H   ++  
Sbjct: 325 TGYDIYLVWEPCAMCAMALVHQRIRRIFYAFPNPNAGALGSVHRLQGEKSLNHHYAVFRV 384

Query: 132 ISEQR 136
              + 
Sbjct: 385 SLPEE 389


>gi|134098691|ref|YP_001104352.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Saccharopolyspora erythraea NRRL 2338]
 gi|133911314|emb|CAM01427.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Saccharopolyspora erythraea NRRL 2338]
          Length = 345

 Score = 74.2 bits (182), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 32/139 (23%), Positives = 48/139 (34%), Gaps = 21/139 (15%)

Query: 8   MSCALEEAQ--NAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M  A+  A+          PVG V VL+           R       HAE++A+R     
Sbjct: 14  MRTAIGAAEGVRGTTSPNPPVGCV-VLDAAGAVAGIGATRPPGGP--HAEVVALREAG-- 68

Query: 66  LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
              E        VTLEPC        C  A+  A + R+ +  S+P       G      
Sbjct: 69  ---ERARGGTAVVTLEPCSHTGRTPPCTDALLAAGVARVVHAVSDPMPVAAG-GADILRA 124

Query: 120 ATCHHSPEIYPGISEQRSR 138
           A      E++ G+  + + 
Sbjct: 125 AG----VEVHSGLLAEEAE 139


>gi|326799622|ref|YP_004317441.1| CMP/dCMP deaminase zinc-binding protein [Sphingobacterium sp. 21]
 gi|326550386|gb|ADZ78771.1| CMP/dCMP deaminase zinc-binding protein [Sphingobacterium sp. 21]
          Length = 149

 Score = 74.2 bits (182), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 36/142 (25%), Positives = 51/142 (35%), Gaps = 25/142 (17%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGN------------------RNR 45
             +FM+ ALE A+ +       VGAV   + +IIS   N                     
Sbjct: 7   DEIFMNLALELAERSHCVKAH-VGAVLAKDTRIISIGYNGPPSGTHNCDQEWPLEGCARD 65

Query: 46  ELKDVTA--HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
                +   HAE  AI    +  +   L    LY TL PC  CA  I  A I ++ Y  S
Sbjct: 66  SKGSCSLALHAEENAILYAVKNGAG--LQGATLYTTLSPCLPCARLIYSAGIVKVLYKYS 123

Query: 104 NPKGGGIEN--GTQFYTLATCH 123
             +  G+ +  G  F      +
Sbjct: 124 YAEYKGLTSDEGVDFLNRFGVN 145


>gi|317503536|ref|ZP_07961560.1| cytidine/deoxycytidylate deaminase [Prevotella salivae DSM 15606]
 gi|315665348|gb|EFV04991.1| cytidine/deoxycytidylate deaminase [Prevotella salivae DSM 15606]
          Length = 150

 Score = 74.2 bits (182), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 34/110 (30%), Positives = 43/110 (39%), Gaps = 15/110 (13%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKD--------VTA--- 52
            N ++  A   A+N+       VGA+ V +  IIS   N      D        VT    
Sbjct: 11  DNRYLRMARIWAENSYCLR-RQVGALVVKDKMIISDGYNGTPSGFDNVCEDNEGVTYPYV 69

Query: 53  -HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
            HAE  AI    R  +        LYVT  PC  CA  I  A I+R+ Y 
Sbjct: 70  LHAEANAITKLARSNNNSD--GSTLYVTASPCIECAKLIIQAGIKRVVYA 117


>gi|323342858|ref|ZP_08083090.1| competence protein comEB [Erysipelothrix rhusiopathiae ATCC 19414]
 gi|322463970|gb|EFY09164.1| competence protein comEB [Erysipelothrix rhusiopathiae ATCC 19414]
          Length = 159

 Score = 74.2 bits (182), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 30/128 (23%), Positives = 42/128 (32%), Gaps = 33/128 (25%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNK-IISRAGN-------------R 43
           +     FM  A   A  +      P   VGA  V   K I+    N              
Sbjct: 8   ISWDEYFMGLAHLSALRSKD----PSTQVGAAIVDQQKKIVGIGYNGLPTGLSDDAFPWE 63

Query: 44  NRELKDVTA-----HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98
                  T      HAE+ AI         + L    +YV+L PC  C+ AI  + I+ +
Sbjct: 64  REGDFQTTKYAYVVHAELNAILNA-----TQSLQGCTIYVSLFPCNECSKAIIQSGIKEI 118

Query: 99  YYGASNPK 106
            Y   + K
Sbjct: 119 VY--EDDK 124


>gi|330466988|ref|YP_004404731.1| riboflavin biosynthesis protein ribd [Verrucosispora maris
           AB-18-032]
 gi|328809959|gb|AEB44131.1| riboflavin biosynthesis protein ribd [Verrucosispora maris
           AB-18-032]
          Length = 353

 Score = 74.2 bits (182), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 25/141 (17%), Positives = 44/141 (31%), Gaps = 25/141 (17%)

Query: 8   MSCALEEAQNAALR---NEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
           M  A+E A         N + VG V +  + +++    +          HAEI+A+    
Sbjct: 10  MRRAIELAARGLGTTSPNPV-VGCVLLDADGEVVGEGFHAYAGG----PHAEIVALAQAG 64

Query: 64  RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFY 117
                         VTLEPC        C+ A+  A++ R+     +P            
Sbjct: 65  H-----RAKGGTAVVTLEPCDHTGRTGPCSDALVQAQVARVVIAVPDPTPVAAGGAATLR 119

Query: 118 TLATCHHSPEIYPGISEQRSR 138
                     +  G+    + 
Sbjct: 120 AA-----GIRVDLGVRATEAE 135


>gi|254775815|ref|ZP_05217331.1| riboflavin biosynthesis protein RibD [Mycobacterium avium subsp.
           avium ATCC 25291]
          Length = 341

 Score = 74.2 bits (182), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 31/151 (20%), Positives = 53/151 (35%), Gaps = 22/151 (14%)

Query: 8   MSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M  A+E++           PVGAV +     +   G       D   HAEILA+R    +
Sbjct: 13  MRLAIEQSNQVKGNTYPNPPVGAVVLDGRGEVVGVGGTEPAGGD---HAEILALRRAGDL 69

Query: 66  LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
                     + VTLEPC        C  A+  A +  + Y  ++P         +    
Sbjct: 70  A-----AGGTVVVTLEPCNHHGKTPPCVDALLEAGVSTVVYAIADPNPQAAGGAGRLQEA 124

Query: 120 ATCHHSPEIYPGISEQR-SRQIIQDFFKERR 149
                   +  G+     S   ++++  ++R
Sbjct: 125 -----GVTVRSGLLADEVSGGPLREWLHKQR 150


>gi|86740847|ref|YP_481247.1| CMP/dCMP deaminase, zinc-binding [Frankia sp. CcI3]
 gi|86567709|gb|ABD11518.1| CMP/dCMP deaminase, zinc-binding [Frankia sp. CcI3]
          Length = 150

 Score = 73.8 bits (181), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 32/112 (28%), Positives = 45/112 (40%), Gaps = 14/112 (12%)

Query: 3   KGNVFMSCALEEAQNAA-LRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIR 60
             + +M+ A+E A           VGAV V  NN+ I+   +R  E+ D   HAE  A+ 
Sbjct: 5   DDHRWMTRAIELAHRCPPAAGAYSVGAVIVDKNNQEIAFGFSR--EVDDAV-HAEESAL- 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTM-------CAAAISLARIRRLYYGASNP 105
                     L    +Y TLEPC+        C   I  A+I R+      P
Sbjct: 61  -AKIGPGDPRLATATIYSTLEPCSQRKSRPRTCTQLILEAKIPRVVIAWREP 111


>gi|87310393|ref|ZP_01092523.1| hypothetical protein DSM3645_29881 [Blastopirellula marina DSM
           3645]
 gi|87286892|gb|EAQ78796.1| hypothetical protein DSM3645_29881 [Blastopirellula marina DSM
           3645]
          Length = 481

 Score = 73.8 bits (181), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 39/159 (24%), Positives = 63/159 (39%), Gaps = 35/159 (22%)

Query: 8   MSCALEEAQNAALR---NEIP---VGAVAVLNNKII---SRAGNRNRELKDVTAHAEILA 58
           M  A+E  + +      +  P   VGAV V  +  I   +R      EL+D   HAE   
Sbjct: 2   MEKAIEVMRQSVQEHRPDGSPSPQVGAVLVRPDGSIETAARG-----ELRDG-NHAEFTL 55

Query: 59  IRMGCRILSQEILPEVDLYVTLEPCTM-------CAAAISLARIRRLYYGASNPKGGGIE 111
           +    R  + E L    L+ TLEPC         CA  I  ARIR +Y G  +       
Sbjct: 56  LE---RKCAAENLEGCVLFATLEPCLNRNSPKRGCARHIVGARIREVYVGIEDDNPKVAG 112

Query: 112 NGTQFYTLATCHHSPEIYPGISEQRSRQII----QDFFK 146
            G ++   +       +   + ++  +++I    + FF+
Sbjct: 113 KGIEYLRRSG------VTVHLFDRELQEVILDENKSFFE 145


>gi|255325040|ref|ZP_05366146.1| riboflavin biosynthesis protein RibD [Corynebacterium
           tuberculostearicum SK141]
 gi|255297605|gb|EET76916.1| riboflavin biosynthesis protein RibD [Corynebacterium
           tuberculostearicum SK141]
          Length = 340

 Score = 73.8 bits (181), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 30/110 (27%), Positives = 42/110 (38%), Gaps = 20/110 (18%)

Query: 13  EEAQNAALRN----EIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
             A  A +R       PVGAV V    +I+     +        AHAE++A+R       
Sbjct: 17  AMAAGAEVRGTTSPNPPVGAVIVSPAGEIVGVGATQPVGG----AHAEVMALREAGDKA- 71

Query: 68  QEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIE 111
                     VTLEPC        CA A+  A + R+YY  ++P      
Sbjct: 72  ----RGATAVVTLEPCAHTGRTGPCAQALIDAGVARVYYLHADPTPQAAG 117


>gi|313901005|ref|ZP_07834493.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Clostridium sp. HGF2]
 gi|312953963|gb|EFR35643.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Clostridium sp. HGF2]
          Length = 164

 Score = 73.8 bits (181), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 32/119 (26%), Positives = 45/119 (37%), Gaps = 31/119 (26%)

Query: 4   GNVFMSCALEEAQNAALRNEIP---VGAVAVL-NNKIISRAGN-------------RNRE 46
              FM  A   A+ +      P   VGAV V   ++++S   N                 
Sbjct: 10  DEYFMGLAHLSAKRSKD----PSTQVGAVIVSSEHRVVSIGYNGFPNGCSDDEFPWDREG 65

Query: 47  LKDVTA-----HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
               T      HAE+ AI     + S+  L    +YV+L PC  CA AI  + I R+ Y
Sbjct: 66  DFGNTKYPYVVHAELNAI-----LNSKHDLKGCSIYVSLFPCNECAKAIIQSGISRIVY 119


>gi|268678892|ref|YP_003303323.1| riboflavin biosynthesis protein RibD [Sulfurospirillum deleyianum
           DSM 6946]
 gi|268616923|gb|ACZ11288.1| riboflavin biosynthesis protein RibD [Sulfurospirillum deleyianum
           DSM 6946]
          Length = 338

 Score = 73.8 bits (181), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 34/172 (19%), Positives = 59/172 (34%), Gaps = 40/172 (23%)

Query: 4   GNVFMSCALEEA--QNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIR 60
            N  M  AL+ A            VGAV   +  +I+    +R    K  T HAE+LA++
Sbjct: 6   DNALMQKALDAAWHYQVLTFPNPAVGAVVSNDAGEILGMGAHR----KAGTPHAEVLALK 61

Query: 61  MG----------------------CRILSQEILPEVDLYVTLEPC------TMCAAAISL 92
                                    +   Q +   + L+VTLEPC        C++ I  
Sbjct: 62  EAYLTLTHDTRIEALSDSMALHLFLKENHQHLFSNLSLHVTLEPCHHFGKTPPCSSLIEA 121

Query: 93  ARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
             I+R+  G+ +        G    +        ++  G  ++    ++  F
Sbjct: 122 LGIKRVVIGSYDESLRAKGGGAYLQS-----RGVDVSFGCLKEACDTLLTPF 168


>gi|218129661|ref|ZP_03458465.1| hypothetical protein BACEGG_01240 [Bacteroides eggerthii DSM 20697]
 gi|317477506|ref|ZP_07936731.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Bacteroides eggerthii 1_2_48FAA]
 gi|217988391|gb|EEC54714.1| hypothetical protein BACEGG_01240 [Bacteroides eggerthii DSM 20697]
 gi|316906307|gb|EFV28036.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Bacteroides eggerthii 1_2_48FAA]
          Length = 145

 Score = 73.8 bits (181), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 27/87 (31%), Positives = 36/87 (41%), Gaps = 14/87 (16%)

Query: 26  VGAVAVLNNKIISRAGNRN--------RELKDVT----AHAEILAIRMGCRILSQEILPE 73
           VGA+ V +  IIS   N           +  ++T     HAE  AI    R  +      
Sbjct: 34  VGALIVKDKMIISDGYNGTPSGFENVCEDENNITKPYVLHAEANAITKIARSNNSSN--G 91

Query: 74  VDLYVTLEPCTMCAAAISLARIRRLYY 100
             +YVT  PC  CA  I  A I+R+ Y
Sbjct: 92  ATMYVTASPCIECAKLIIQAGIKRVVY 118


>gi|311739500|ref|ZP_07713335.1| riboflavin biosynthesis protein RibD [Corynebacterium
           pseudogenitalium ATCC 33035]
 gi|311305316|gb|EFQ81384.1| riboflavin biosynthesis protein RibD [Corynebacterium
           pseudogenitalium ATCC 33035]
          Length = 340

 Score = 73.8 bits (181), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 30/110 (27%), Positives = 42/110 (38%), Gaps = 20/110 (18%)

Query: 13  EEAQNAALRN----EIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
             A  A +R       PVGAV V    +I+     +        AHAE++A+R       
Sbjct: 17  AMAAGAEVRGTTSPNPPVGAVIVSPAGEIVGVGATQPVGG----AHAEVMALREAGDKA- 71

Query: 68  QEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIE 111
                     VTLEPC        CA A+  A + R+YY  ++P      
Sbjct: 72  ----RGATAVVTLEPCAHTGRTGPCAQALIDAGVARVYYLHADPTPQAAG 117


>gi|310779654|ref|YP_003967987.1| CMP/dCMP deaminase zinc-binding protein [Ilyobacter polytropus DSM
           2926]
 gi|309748977|gb|ADO83639.1| CMP/dCMP deaminase zinc-binding protein [Ilyobacter polytropus DSM
           2926]
          Length = 165

 Score = 73.8 bits (181), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 32/119 (26%), Positives = 44/119 (36%), Gaps = 31/119 (26%)

Query: 4   GNVFMSCALEEAQNAALRNEIP---VGAVAV-LNNKIISRAGN-------------RNR- 45
              FM  AL  A+ +      P   VGA  V   NKI+    N                 
Sbjct: 12  DEYFMGIALLSAKRSKD----PSTQVGACIVNKENKIVGVGYNGFPKGCSDDNFPWDREG 67

Query: 46  ---ELKDV-TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
              E K     HAE  AI     + S + L +  +YV L PC  CA +I  + I+ + +
Sbjct: 68  EFLETKYPFVMHAEQNAI-----LNSIKKLSDCTIYVGLFPCHECAKSIIQSGIKEVVF 121


>gi|193212376|ref|YP_001998329.1| CMP/dCMP deaminase zinc-binding [Chlorobaculum parvum NCIB 8327]
 gi|193085853|gb|ACF11129.1| CMP/dCMP deaminase zinc-binding [Chlorobaculum parvum NCIB 8327]
          Length = 173

 Score = 73.8 bits (181), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 29/121 (23%), Positives = 42/121 (34%), Gaps = 27/121 (22%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGN--------------------- 42
              FM  A   ++ A       +GAV V +N I+S   N                     
Sbjct: 28  HEYFMCVAHLISRRATCTRGH-IGAVIVRDNNILSTGYNGAPSGLPHCNETNCKIYRSTH 86

Query: 43  ---RNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLY 99
                 E    T HAEI AI    +      + + D+Y+T  PC  C   +    I+ +Y
Sbjct: 87  PDGTVEENCVNTIHAEINAIAQAAKHGVS--IKDADIYITASPCIHCLKVLINVGIKTIY 144

Query: 100 Y 100
           Y
Sbjct: 145 Y 145


>gi|298481407|ref|ZP_06999599.1| cytidine/deoxycytidylate deaminase family protein [Bacteroides sp.
           D22]
 gi|298272271|gb|EFI13840.1| cytidine/deoxycytidylate deaminase family protein [Bacteroides sp.
           D22]
          Length = 149

 Score = 73.8 bits (181), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 30/112 (26%), Positives = 46/112 (41%), Gaps = 15/112 (13%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRN--------RELKDVT- 51
           ++    ++  A   A+N+  +    VGA+ V +  IIS   N           +  ++T 
Sbjct: 8   LELDKRYIRMASIWAENSYCQRRK-VGALIVKDKMIISDGYNGTPSGFENVCEDENNLTK 66

Query: 52  ---AHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
               HAE  AI    R  +        +YVT  PC  CA  I  A I+R+ Y
Sbjct: 67  PYVLHAEANAITKIARSNNSSD--GATMYVTASPCIECAKLIIQAGIKRVVY 116


>gi|269795119|ref|YP_003314574.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase
           /5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Sanguibacter keddieii DSM 10542]
 gi|269097304|gb|ACZ21740.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase
           /5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Sanguibacter keddieii DSM 10542]
          Length = 393

 Score = 73.8 bits (181), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 28/167 (16%), Positives = 51/167 (30%), Gaps = 43/167 (25%)

Query: 8   MSCALEEAQNAALRNEIP-VGAVAVLNN-------------------------KIISRAG 41
           M+ AL+ A+        P VG V +  +                         ++++   
Sbjct: 27  MAHALDLARRGPAHGPNPQVGCVILAADTADATRTAGTPGATSAGGAEASRPRRVLAVGW 86

Query: 42  NRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARI 95
           +R       T HAE  A+       S   +      VTLEPC        CA A+  A +
Sbjct: 87  HR----GAGTPHAEADALARASA--SGVDVRGATAVVTLEPCNHTGRTGPCAQALLDAGV 140

Query: 96  RRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQ 142
             +     +P            +     H   +  G+      ++++
Sbjct: 141 AEVVVSVGDPNPVASGGMGHLRS-----HGVAVRTGLLADEGEELLR 182


>gi|71415321|ref|XP_809731.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
 gi|70874158|gb|EAN87880.1| hypothetical protein, conserved [Trypanosoma cruzi]
          Length = 384

 Score = 73.8 bits (181), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 21/73 (28%), Positives = 40/73 (54%), Gaps = 3/73 (4%)

Query: 60  RMGCRILSQ---EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116
           +   R        +  E+DL+V+ EPC MC+ A+  +R+RR++Y  +NP  GG+ +    
Sbjct: 280 QQAQRWTKDNVPYLANEIDLFVSHEPCVMCSMALVHSRVRRVFYCFANPTHGGLGSVFSI 339

Query: 117 YTLATCHHSPEIY 129
           +T+   +H   ++
Sbjct: 340 HTIPLLNHHFRVF 352


>gi|257453281|ref|ZP_05618580.1| deoxycytidylate deaminase [Fusobacterium sp. 3_1_5R]
 gi|257467124|ref|ZP_05631435.1| deoxycytidylate deaminase [Fusobacterium gonidiaformans ATCC 25563]
 gi|315918255|ref|ZP_07914495.1| deoxycytidylate deaminase [Fusobacterium gonidiaformans ATCC 25563]
 gi|317059814|ref|ZP_07924299.1| deoxycytidylate deaminase [Fusobacterium sp. 3_1_5R]
 gi|313685490|gb|EFS22325.1| deoxycytidylate deaminase [Fusobacterium sp. 3_1_5R]
 gi|313692130|gb|EFS28965.1| deoxycytidylate deaminase [Fusobacterium gonidiaformans ATCC 25563]
          Length = 160

 Score = 73.8 bits (181), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 34/122 (27%), Positives = 44/122 (36%), Gaps = 31/122 (25%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNK-IISRAGN-------------R 43
           +     FM  AL  A  +      P   VGA  V  +K II    N              
Sbjct: 7   ITWDEYFMGVALLSAMRSKD----PNTQVGACIVSPDKKIIGLGYNGLPKGCEDDEFPWE 62

Query: 44  NR----ELKDV-TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98
                 E K     HAE+ AI     + S + L    +YV L PC  C+ AI  + IR +
Sbjct: 63  REGEFLETKYPYVCHAELNAI-----LNSTQSLKNCTIYVALFPCHECSKAIIQSGIREI 117

Query: 99  YY 100
            Y
Sbjct: 118 VY 119


>gi|254822405|ref|ZP_05227406.1| riboflavin biosynthesis protein RibD [Mycobacterium intracellulare
           ATCC 13950]
          Length = 341

 Score = 73.8 bits (181), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 31/151 (20%), Positives = 54/151 (35%), Gaps = 22/151 (14%)

Query: 8   MSCALEEAQ--NAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M  A+E++           PVGAV +     +   G       D   HAEILA+R    +
Sbjct: 13  MRLAIEQSTLVKGTTYPNPPVGAVILDAGGEVVGVGGTEPAGGD---HAEILALRRAGDL 69

Query: 66  LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
                     + VTLEPC        C  A+  A +  + Y  ++P         +    
Sbjct: 70  A-----AGGTVVVTLEPCNHYGKTPPCVNALLDANVATVVYAVADPNPQAAGGAARLEEA 124

Query: 120 ATCHHSPEIYPGISEQR-SRQIIQDFFKERR 149
                   +  G+     +R  ++++  ++R
Sbjct: 125 -----GVAVRSGVLADEVARGPLREWLHKQR 150


>gi|121595493|ref|YP_987389.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase /
           diaminohydroxyphosphoribosylaminopyrimidine deaminase
           [Acidovorax sp. JS42]
 gi|120607573|gb|ABM43313.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase /
           diaminohydroxyphosphoribosylaminopyrimidine deaminase
           [Acidovorax sp. JS42]
          Length = 366

 Score = 73.8 bits (181), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 38/148 (25%), Positives = 54/148 (36%), Gaps = 19/148 (12%)

Query: 9   SCALEEAQNAA-LRNEIP-VGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
             AL  A  A  L N  P VG V    N  ++ +   +        +HAE++A+R     
Sbjct: 5   DQALGLAAQALFLSNPNPRVGCVITDVNGNMLGQGFTQRAGA----SHAEVMALRDAAAR 60

Query: 66  LSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
                      YVTLEPC        C  A+  A I  +    ++P       G  F  L
Sbjct: 61  GCDVR--GATAYVTLEPCAHQGRTGPCCDALIQAGIAHVVASIADPNPLVAGQG--FARL 116

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKE 147
                  E+ PG    +SR++   FF  
Sbjct: 117 RAAGVQVEVGPG--GTQSRELNIGFFSR 142


>gi|56566286|gb|AAV98473.1| FCY1 [Cryptococcus neoformans var. neoformans]
          Length = 225

 Score = 73.8 bits (181), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 33/111 (29%), Positives = 45/111 (40%), Gaps = 14/111 (12%)

Query: 6   VFMSCALEEAQNAALRN--EIPVGAVAVL--NNKIISRAGNRNRELKDVTAHAEILAIRM 61
            +M  A  EA  A      + P G   V   +++++    N+     +   H EI AI  
Sbjct: 39  HWMRVA-NEAVYADGHPCPQAPFGTAIVNTTSDELVCVTSNKVGITGNPAMHGEISAITY 97

Query: 62  ------GCRILSQEILPE---VDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
                      SQEIL       LY   EPC MCA+AI  A  + + YG S
Sbjct: 98  CTEVLTAKGWTSQEILAGWKDFSLYTNGEPCPMCASAIRWAGFKEVIYGTS 148


>gi|120403674|ref|YP_953503.1| riboflavin biosynthesis protein RibD [Mycobacterium vanbaalenii
           PYR-1]
 gi|119956492|gb|ABM13497.1| riboflavin biosynthesis protein RibD [Mycobacterium vanbaalenii
           PYR-1]
          Length = 333

 Score = 73.8 bits (181), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 32/148 (21%), Positives = 51/148 (34%), Gaps = 34/148 (22%)

Query: 1   MKKGNVFMSCALEEAQNAALRN--EIPVGAVAV-LNNKIISRAGNRNRELKDVTA----- 52
           MK     M+ A+E+++    R     PVGAV +  + +I              TA     
Sbjct: 1   MKLDAA-MAAAIEQSERVKGRTYPNPPVGAVILDRDGEIAGVG---------ATAPPGGP 50

Query: 53  HAEILAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPK 106
           HAE++A+R        E        VTLEPC        C  A+  A I  + +  ++P 
Sbjct: 51  HAEVVALRRAG-----ERAVGGTAVVTLEPCNHFGRTPPCVDALLDAGIAEVAFAVADPD 105

Query: 107 GGGIENGTQFYTLATCHHSPEIYPGISE 134
                   +            +  G+  
Sbjct: 106 PVAAGGAARLAES-----GVRVSAGVLA 128


>gi|29349668|ref|NP_813171.1| deoxycytidylate deaminase [Bacteroides thetaiotaomicron VPI-5482]
 gi|253569961|ref|ZP_04847370.1| deoxycytidylate deaminase [Bacteroides sp. 1_1_6]
 gi|298383932|ref|ZP_06993493.1| cytidine/deoxycytidylate deaminase family protein [Bacteroides sp.
           1_1_14]
 gi|29341578|gb|AAO79365.1| deoxycytidylate deaminase [Bacteroides thetaiotaomicron VPI-5482]
 gi|251840342|gb|EES68424.1| deoxycytidylate deaminase [Bacteroides sp. 1_1_6]
 gi|298263536|gb|EFI06399.1| cytidine/deoxycytidylate deaminase family protein [Bacteroides sp.
           1_1_14]
          Length = 149

 Score = 73.8 bits (181), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 30/112 (26%), Positives = 46/112 (41%), Gaps = 15/112 (13%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRN--------RELKDVT- 51
           ++    ++  A   A+N+  +    VGA+ V +  IIS   N           +  ++T 
Sbjct: 8   LELDKRYIRMASIWAENSYCQRRK-VGALIVKDKMIISDGYNGTPSGFENVCEDENNLTK 66

Query: 52  ---AHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
               HAE  AI    R  +        +YVT  PC  CA  I  A I+R+ Y
Sbjct: 67  PYVLHAEANAITKIARSNNSSD--GATMYVTASPCIECAKLIIQAGIKRVVY 116


>gi|256820204|ref|YP_003141483.1| CMP/dCMP deaminase zinc-binding [Capnocytophaga ochracea DSM 7271]
 gi|256581787|gb|ACU92922.1| CMP/dCMP deaminase zinc-binding [Capnocytophaga ochracea DSM 7271]
          Length = 146

 Score = 73.8 bits (181), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 30/121 (24%), Positives = 46/121 (38%), Gaps = 17/121 (14%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDV------------T 51
              +M  A+E A+ +  + +  VGA+ V +  IIS   N      D              
Sbjct: 13  DKAYMCMAMEWAKLSYSQRKQ-VGAIIVKDRMIISDGYNGTPTGFDNCCEDEEGNTHWYV 71

Query: 52  AHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY--GASNPKGGG 109
            HAE  AI                LY+T+ PC  C+  I  + I+R+ Y  G  + +G  
Sbjct: 72  LHAEANAIMKVASSTQSS--EGATLYITMSPCKECSKLIYQSGIKRVVYKEGYRDNEGLA 129

Query: 110 I 110
            
Sbjct: 130 F 130


>gi|114052458|ref|NP_001040508.1| DCMP deaminase [Bombyx mori]
 gi|95102556|gb|ABF51216.1| DCMP deaminase [Bombyx mori]
          Length = 189

 Score = 73.8 bits (181), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 29/119 (24%), Positives = 44/119 (36%), Gaps = 31/119 (26%)

Query: 5   NVFMSCALEEAQNAALRNEIP---VGAVAVL-NNKIISRAGN-RNRELKD---------V 50
             FM+ A   A+ +      P   VGA  V  +NKI+    N       D          
Sbjct: 29  EYFMAVAFLAAKRSKD----PKTQVGACIVNNDNKIVGIGYNGMPIGCNDDDFPWGKNTP 84

Query: 51  TA---------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
           +          HAE+ AI       +   + +  +YV L PC  CA  I  + I+++ Y
Sbjct: 85  SPLDSKYLYVCHAEMNAILN----KNSADVKDCTIYVGLFPCNECAKMIIQSGIKKVVY 139


>gi|288921249|ref|ZP_06415533.1| CMP/dCMP deaminase zinc-binding [Frankia sp. EUN1f]
 gi|288347339|gb|EFC81632.1| CMP/dCMP deaminase zinc-binding [Frankia sp. EUN1f]
          Length = 150

 Score = 73.8 bits (181), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 32/112 (28%), Positives = 44/112 (39%), Gaps = 14/112 (12%)

Query: 3   KGNVFMSCALEEAQNAA-LRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIR 60
             + +M+ A+E A           VGAV V  NN+ I+   +R  E+ D   HAE  A+ 
Sbjct: 5   DDHRWMTRAIELAHRCPPATGAYSVGAVIVDENNEEIAFGYSR--EVDDAV-HAEESAL- 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTM-------CAAAISLARIRRLYYGASNP 105
                     L    +Y TLEPC+        C   I  A I R+      P
Sbjct: 61  -AKIAPDDPRLATATIYSTLEPCSQRRSRPRTCTQLILAAGIPRVVIAWREP 111


>gi|239616728|ref|YP_002940050.1| CMP/dCMP deaminase zinc-binding [Kosmotoga olearia TBF 19.5.1]
 gi|239505559|gb|ACR79046.1| CMP/dCMP deaminase zinc-binding [Kosmotoga olearia TBF 19.5.1]
          Length = 170

 Score = 73.8 bits (181), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 31/122 (25%), Positives = 53/122 (43%), Gaps = 30/122 (24%)

Query: 4   GNVFMSCA--LEEAQNAALRNEIPVGAVAVLNNKIISRAGNRN----------RELKDVT 51
            + FMS A  ++E +++ L  +  VGA+ V  N+I++   N+             ++D  
Sbjct: 26  DSYFMSLAHLIKE-RSSCLHRK--VGAIIVRENRILATGYNQPPSGFPHCNEIECIRDAL 82

Query: 52  -------------AHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98
                        AHAE  A+    +           +YVT +PC++CA  I  A I+R+
Sbjct: 83  SIQSGENQEICYAAHAEQNALSQAAKFGISTD--GATIYVTHKPCSICARLIINAGIKRV 140

Query: 99  YY 100
            Y
Sbjct: 141 VY 142


>gi|86134833|ref|ZP_01053415.1| Deoxycytidylate deaminase [Polaribacter sp. MED152]
 gi|85821696|gb|EAQ42843.1| Deoxycytidylate deaminase [Polaribacter sp. MED152]
          Length = 141

 Score = 73.4 bits (180), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 34/131 (25%), Positives = 50/131 (38%), Gaps = 23/131 (17%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRN--------RELKDVT- 51
           +K    ++  ALE  + +  + +  VGA+ V +  IIS   N           +    T 
Sbjct: 7   LKYDKAYLRMALEWGKLSHCKRKQ-VGALIVKDRMIISDGFNGTPTGFDNCCEDENGATK 65

Query: 52  ---AHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY--GASNPK 106
               HAE  AI                LY+TL PCT C+  I  A I+R+ Y     +P 
Sbjct: 66  WEVLHAEANAILKVASSTQSA--KNATLYITLSPCTQCSKLIHQAGIKRVVYANAYKDP- 122

Query: 107 GGGIENGTQFY 117
                +G  F 
Sbjct: 123 -----SGLDFL 128


>gi|237715563|ref|ZP_04546044.1| deoxycytidylate deaminase [Bacteroides sp. D1]
 gi|262408572|ref|ZP_06085118.1| ComE operon protein 2 [Bacteroides sp. 2_1_22]
 gi|294647040|ref|ZP_06724653.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Bacteroides ovatus SD CC 2a]
 gi|294809884|ref|ZP_06768560.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Bacteroides xylanisolvens SD CC 1b]
 gi|229444272|gb|EEO50063.1| deoxycytidylate deaminase [Bacteroides sp. D1]
 gi|262353437|gb|EEZ02531.1| ComE operon protein 2 [Bacteroides sp. 2_1_22]
 gi|292637617|gb|EFF56022.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Bacteroides ovatus SD CC 2a]
 gi|294442913|gb|EFG11704.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Bacteroides xylanisolvens SD CC 1b]
 gi|295086823|emb|CBK68346.1| Deoxycytidylate deaminase [Bacteroides xylanisolvens XB1A]
          Length = 149

 Score = 73.4 bits (180), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 30/112 (26%), Positives = 46/112 (41%), Gaps = 15/112 (13%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRN--------RELKDVT- 51
           ++    ++  A   A+N+  +    VGA+ V +  IIS   N           +  ++T 
Sbjct: 8   LELDKRYIRMASIWAENSYCQRRK-VGALIVKDKMIISDGYNGTPSGFENVCEDENNLTK 66

Query: 52  ---AHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
               HAE  AI    R  +        +YVT  PC  CA  I  A I+R+ Y
Sbjct: 67  PYVLHAEANAITKIARSNNSSD--GATMYVTASPCIECAKLIIQAGIKRVVY 116


>gi|58265894|ref|XP_570103.1| cytosine deaminase [Cryptococcus neoformans var. neoformans JEC21]
 gi|134110332|ref|XP_775993.1| hypothetical protein CNBD0430 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|50258661|gb|EAL21346.1| hypothetical protein CNBD0430 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|56566313|gb|AAV98489.1| FCY1 [Cryptococcus neoformans var. neoformans]
 gi|57226336|gb|AAW42796.1| cytosine deaminase, putative [Cryptococcus neoformans var.
           neoformans JEC21]
          Length = 225

 Score = 73.4 bits (180), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 33/111 (29%), Positives = 45/111 (40%), Gaps = 14/111 (12%)

Query: 6   VFMSCALEEAQNAALRN--EIPVGAVAVL--NNKIISRAGNRNRELKDVTAHAEILAIRM 61
            +M  A  EA  A      + P G   V   +++++    N+     +   H EI AI  
Sbjct: 39  HWMRVA-NEAVYADGHPCPQAPFGTAIVNTTSDELVCVTSNKVGITGNPAMHGEISAITY 97

Query: 62  ------GCRILSQEILPE---VDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
                      SQEIL       LY   EPC MCA+AI  A  + + YG S
Sbjct: 98  CTEVLTAKGWTSQEILAGWKDFSLYTNGEPCPMCASAIRWAGFKEVIYGTS 148


>gi|313665291|ref|YP_004047162.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Mycoplasma leachii PG50]
 gi|312949249|gb|ADR23845.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Mycoplasma leachii PG50]
          Length = 160

 Score = 73.4 bits (180), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 39/124 (31%), Positives = 52/124 (41%), Gaps = 33/124 (26%)

Query: 5   NVFMSCALEEAQNAALRNEIP---VGAVAVLN-NKIISRAGN---RNRELKDVT------ 51
           + FM  A   A  +      P   VGA+ V    +I++   N   R     D        
Sbjct: 12  HYFMLIAKASAMRSKD----PNTQVGAIVVNELQQIVATGYNGFPRGVSDDDFPWSKTNE 67

Query: 52  ----------AHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
                     AHAE+ AI     + S+  L   DLYVTL PC  CA  I  A I+R+YY 
Sbjct: 68  DWLENKYAYVAHAELNAI-----VSSRSDLSNCDLYVTLFPCNECAKIIIQAGIKRIYY- 121

Query: 102 ASNP 105
           A++P
Sbjct: 122 ANDP 125


>gi|253583057|ref|ZP_04860275.1| deoxycytidylate deaminase [Fusobacterium varium ATCC 27725]
 gi|251835263|gb|EES63806.1| deoxycytidylate deaminase [Fusobacterium varium ATCC 27725]
          Length = 163

 Score = 73.4 bits (180), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 35/122 (28%), Positives = 47/122 (38%), Gaps = 31/122 (25%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNK-IISRAGN-------------- 42
           ++    FM  AL  A+ +      P   VGA  V   + II    N              
Sbjct: 7   IEWDEYFMGVALLSAKRSKD----PNTQVGACIVNEERRIIGVGYNGLPKGCSDDEFPWE 62

Query: 43  RNRELKDV----TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98
           R+ E  D       HAE+ AI     + S + L    LYV L PC  C+ AI  + I+ L
Sbjct: 63  RDGEFLDTKYPFVCHAELNAI-----LNSTKTLKNCTLYVALFPCHECSKAIIQSGIKEL 117

Query: 99  YY 100
            Y
Sbjct: 118 VY 119


>gi|119961067|ref|YP_947578.1| riboflavin biosynthesis protein RibD [Arthrobacter aurescens TC1]
 gi|119947926|gb|ABM06837.1| riboflavin biosynthesis protein RibD [Arthrobacter aurescens TC1]
          Length = 373

 Score = 73.4 bits (180), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 38/153 (24%), Positives = 59/153 (38%), Gaps = 23/153 (15%)

Query: 8   MSCALEEAQNAALRNEIP-VGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M  AL  A  A  R   P VGAV +  + + ++   +R       TAHAE  AI    + 
Sbjct: 16  MDAALT-AALAGPRGANPLVGAVILSPDGEQLATGYHR----GAGTAHAEADAISEARKK 70

Query: 66  LSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
                +    + VTLEPC        CA AI  A I ++ Y   +P              
Sbjct: 71  --GIDIVGTTMVVTLEPCNHVGRTGPCAQAIIAAGIAKVIYAVDDPHDPAAGGARTLSAA 128

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFF---KERR 149
                  E+  G+  +++  + +D+F     +R
Sbjct: 129 -----GVEVISGLEGEKALDLNRDWFDAVAAKR 156


>gi|311898175|dbj|BAJ30583.1| putative diaminohydroxyphosphoribosylamino- pyrimidine deaminase
           [Kitasatospora setae KM-6054]
          Length = 153

 Score = 73.4 bits (180), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 34/152 (22%), Positives = 51/152 (33%), Gaps = 30/152 (19%)

Query: 4   GNVFMSCALEEAQN------AALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEI 56
              +M  A+E ++       A       VGAV V  + ++++   +R     D   HAE 
Sbjct: 9   DLRWMRRAIELSKRCPPSRTAFS-----VGAVIVGADGEVLAEGHSREV---DAVNHAEE 60

Query: 57  LAIRMGCRILSQEILPEVDLYVTLEPC-------TMCAAAISLARIRRLYYGASNPK-GG 108
            A+           L    +Y TLEPC         CA  I  A + R+      P    
Sbjct: 61  AALGKLPA--GDPRLRAATVYSTLEPCGQRASRPHPCAELIVAAGVPRVVVAWREPSLFV 118

Query: 109 GIENGTQFYTLATCHHSPEIYP-GISEQRSRQ 139
               GT   T A      E+       + +R 
Sbjct: 119 AACQGTALLTAAG----VEVIELPELAEEARA 146


>gi|254457747|ref|ZP_05071175.1| deoxycytidylate deaminase [Campylobacterales bacterium GD 1]
 gi|207086539|gb|EDZ63823.1| deoxycytidylate deaminase [Campylobacterales bacterium GD 1]
          Length = 147

 Score = 73.4 bits (180), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 29/124 (23%), Positives = 46/124 (37%), Gaps = 29/124 (23%)

Query: 1   MKKGNVFMSCALEEAQNAA---LRNEIPVGAVAVLNNKIISRAGNRN-----------RE 46
           M     F++ A E A  +     +    VGAV V + +I+S   N               
Sbjct: 1   MLSDQNFINIAQELATASKCVSKQ----VGAVIVKDGRILSTGYNGTPAGFTNCCDHWNG 56

Query: 47  LKDVTA---------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRR 97
                          HAE+ AI    R      +    ++VTLEPC+ C+  +  + I+R
Sbjct: 57  EYTPDHHEWSKTYEIHAEMNAIIWAARKGIS--IEGASIFVTLEPCSECSKNLIASGIKR 114

Query: 98  LYYG 101
           + Y 
Sbjct: 115 IVYA 118


>gi|328873884|gb|EGG22250.1| hypothetical protein DFA_04368 [Dictyostelium fasciculatum]
          Length = 328

 Score = 73.4 bits (180), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 21/99 (21%), Positives = 38/99 (38%), Gaps = 10/99 (10%)

Query: 49  DVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGG 108
           ++ AH E +AI     +   +      LY T EPC MCA A+  A  + + +G  N    
Sbjct: 106 NMIAHGETVAINNCTALYGIKSFTNFTLYTTGEPCAMCAGALVWADFKTIVWGTFNRDLY 165

Query: 109 GIENGTQFYTLAT----------CHHSPEIYPGISEQRS 137
                +     ++           + +P +  G+   +S
Sbjct: 166 CKICMSNIPMDSSYIFARAFGLGANKAPRVIGGVLRAQS 204


>gi|189467913|ref|ZP_03016698.1| hypothetical protein BACINT_04305 [Bacteroides intestinalis DSM
           17393]
 gi|189436177|gb|EDV05162.1| hypothetical protein BACINT_04305 [Bacteroides intestinalis DSM
           17393]
          Length = 156

 Score = 73.4 bits (180), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 27/87 (31%), Positives = 36/87 (41%), Gaps = 14/87 (16%)

Query: 26  VGAVAVLNNKIISRAGNRN--------RELKDVT----AHAEILAIRMGCRILSQEILPE 73
           VGA+ V +  IIS   N           +  +VT     HAE  AI    R  +      
Sbjct: 34  VGALIVKDKMIISDGYNGTPAGFENVCEDDNNVTKPYVLHAEANAITKIARSNNSSD--G 91

Query: 74  VDLYVTLEPCTMCAAAISLARIRRLYY 100
             +YVT  PC  C+  I  A I+R+ Y
Sbjct: 92  ATMYVTASPCIECSKLIIQAGIKRVVY 118


>gi|153807590|ref|ZP_01960258.1| hypothetical protein BACCAC_01872 [Bacteroides caccae ATCC 43185]
 gi|149129952|gb|EDM21164.1| hypothetical protein BACCAC_01872 [Bacteroides caccae ATCC 43185]
          Length = 148

 Score = 73.4 bits (180), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 30/109 (27%), Positives = 44/109 (40%), Gaps = 15/109 (13%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRN--------RELKDVT---- 51
              ++  A   A+N+  +    VGA+ V +  IIS   N           +  ++T    
Sbjct: 11  DKRYIRMASIWAENSYCQRRK-VGALIVKDKMIISDGYNGTPSGFENVCEDENNLTKPYV 69

Query: 52  AHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
            HAE  AI    R  +        +YVT  PC  CA  I  A I+R+ Y
Sbjct: 70  LHAEANAITKIARSNNSSD--GATMYVTASPCIECAKLIIQAGIKRVVY 116


>gi|296123695|ref|YP_003631473.1| riboflavin biosynthesis protein RibD [Planctomyces limnophilus DSM
           3776]
 gi|296016035|gb|ADG69274.1| riboflavin biosynthesis protein RibD [Planctomyces limnophilus DSM
           3776]
          Length = 401

 Score = 73.4 bits (180), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 31/146 (21%), Positives = 52/146 (35%), Gaps = 22/146 (15%)

Query: 8   MSCALEEAQNA--ALRNEIPVGAVAVLNN-KIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           M  AL  A+     +     VGAV V  + +++    +   +      HAE+ A+     
Sbjct: 10  MEYALMLARRGVGFVEPNPAVGAVVVDEHLQLLGEGWH--EKFGGP--HAEVHALAKAGE 65

Query: 65  ILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
                      +Y TLEPC        CA A+  A IR +     +P       G +   
Sbjct: 66  KA-----RGATIYTTLEPCSHFGKTPPCADALIAAGIRHVETAVIDPAAHVSGQGIEKLR 120

Query: 119 LATCHHSPEIYPGISEQRSRQIIQDF 144
            A       +  G    ++R+++  F
Sbjct: 121 QAG----ITVNVGRCADKARELLAPF 142


>gi|27468193|ref|NP_764830.1| putative dCMP deaminase [Staphylococcus epidermidis ATCC 12228]
 gi|57867051|ref|YP_188732.1| comE operon protein 2 [Staphylococcus epidermidis RP62A]
 gi|293366451|ref|ZP_06613128.1| ComE operon protein 2 [Staphylococcus epidermidis M23864:W2(grey)]
 gi|27315739|gb|AAO04874.1|AE016748_108 putative dCMP deaminase [Staphylococcus epidermidis ATCC 12228]
 gi|57637709|gb|AAW54497.1| comE operon protein 2 [Staphylococcus epidermidis RP62A]
 gi|291319220|gb|EFE59589.1| ComE operon protein 2 [Staphylococcus epidermidis M23864:W2(grey)]
 gi|329725366|gb|EGG61849.1| ComE operon protein 2 [Staphylococcus epidermidis VCU144]
 gi|329735176|gb|EGG71468.1| ComE operon protein 2 [Staphylococcus epidermidis VCU045]
          Length = 153

 Score = 73.4 bits (180), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 28/116 (24%), Positives = 45/116 (38%), Gaps = 18/116 (15%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRE-------------- 46
           +K    FM+ +   A  +  +  + VGA  V +N+II+   N +                
Sbjct: 4   IKWEEYFMAQSHLLALRSTCKR-LSVGATIVKDNRIIAGGYNGSVAGEVHCIDEGCLIED 62

Query: 47  -LKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
                T HAE+ A+    +           +YVT  PC  C  +I  A I+ +YY 
Sbjct: 63  GHCIRTIHAEMNALLQCAKQGVST--EGATIYVTHFPCLNCTKSIIQAGIKTIYYA 116


>gi|224538415|ref|ZP_03678954.1| hypothetical protein BACCELL_03309 [Bacteroides cellulosilyticus
           DSM 14838]
 gi|224519974|gb|EEF89079.1| hypothetical protein BACCELL_03309 [Bacteroides cellulosilyticus
           DSM 14838]
          Length = 153

 Score = 73.4 bits (180), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 27/87 (31%), Positives = 36/87 (41%), Gaps = 14/87 (16%)

Query: 26  VGAVAVLNNKIISRAGNRN--------RELKDVT----AHAEILAIRMGCRILSQEILPE 73
           VGA+ V +  IIS   N           +  +VT     HAE  AI    R  +      
Sbjct: 34  VGALIVKDKMIISDGYNGTPAGFENVCEDDNNVTKPYVLHAEANAITKIARSNNSSD--G 91

Query: 74  VDLYVTLEPCTMCAAAISLARIRRLYY 100
             +YVT  PC  C+  I  A I+R+ Y
Sbjct: 92  ATMYVTASPCIECSKLIIQAGIKRVVY 118


>gi|219113687|ref|XP_002186427.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|209583277|gb|ACI65897.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 386

 Score = 73.4 bits (180), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 35/198 (17%), Positives = 60/198 (30%), Gaps = 58/198 (29%)

Query: 2   KKGNVFMSCALEEAQNAALRN--EIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEIL 57
            +   F+  A+E A+           VG V V   +  ++ +  +          HAE+ 
Sbjct: 47  TEDEGFLRQAIECAKEGLGHTFPNPAVGCVLVNQEDGTVLGKGFHPRAGY----PHAEVF 102

Query: 58  AIRMGCRIL-----------------------------------SQEILPEVDL------ 76
           A+      L                                     E L E  L      
Sbjct: 103 ALLQAAGHLEDGVAAGQAVVKKQNEQGAILNEVLRLSQQYTTDDGPEQLFEDTLAKSNVT 162

Query: 77  -YVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIY 129
            YVTLEPC        CA  ++LA+  R+  G  +P       G +         + ++ 
Sbjct: 163 AYVTLEPCSHYGKTPPCAVTLALAQASRVVVGFRDPNPKVDGGGVKLLREVGV--AVDMA 220

Query: 130 PGISEQRSRQIIQDFFKE 147
            G   +   +++ +F K 
Sbjct: 221 EGALSEACAELVTNFVKR 238


>gi|86740605|ref|YP_481005.1| CMP/dCMP deaminase, zinc-binding [Frankia sp. CcI3]
 gi|86567467|gb|ABD11276.1| CMP/dCMP deaminase, zinc-binding [Frankia sp. CcI3]
          Length = 150

 Score = 73.4 bits (180), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 31/112 (27%), Positives = 43/112 (38%), Gaps = 14/112 (12%)

Query: 3   KGNVFMSCALEEAQNA-ALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIR 60
             + +M+ A+E A           VGAV V  N + I+   +R     D T HAE  A+ 
Sbjct: 5   DDHRWMTRAIELAHRCPPATGAYSVGAVIVGENGEEIAFGFSREV---DDTVHAEESAL- 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTM-------CAAAISLARIRRLYYGASNP 105
                     L    +Y TLEPC+        C   I  A+I R+      P
Sbjct: 61  -AKVAPDDPRLATATIYSTLEPCSQRMSWPRTCTQLILEAKIPRVVIAWREP 111


>gi|289434763|ref|YP_003464635.1| zinc-binding, ComEB family dCMP deaminase [Listeria seeligeri
           serovar 1/2b str. SLCC3954]
 gi|289171007|emb|CBH27549.1| zinc-binding, ComEB family dCMP deaminase [Listeria seeligeri
           serovar 1/2b str. SLCC3954]
          Length = 176

 Score = 73.4 bits (180), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 25/91 (27%), Positives = 39/91 (42%), Gaps = 17/91 (18%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKD---------------VTAHAEILAIRMGCRILSQEI 70
           VGA  V + +II+   N +    D                T HAE+ AI    +  +   
Sbjct: 18  VGATIVRDKRIIAGGYNGSIAGGDHCAEHGCYVVDGHCIRTIHAEMNAILQCAKFGATTD 77

Query: 71  LPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
             + +LYVT  PC  C  +I  A I+++Y+ 
Sbjct: 78  --QAELYVTHFPCLACTKSIIQAGIKKVYFA 106


>gi|134081301|emb|CAK41804.1| unnamed protein product [Aspergillus niger]
          Length = 259

 Score = 73.4 bits (180), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 27/178 (15%), Positives = 52/178 (29%), Gaps = 52/178 (29%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
            +   FM  AL   + A    E PVG V V + KI+    N   +  +V           
Sbjct: 14  SEHAYFMKQALLMGEKALETGETPVGCVLVYDKKIVGFGMNDTNKSMNVV---------- 63

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIR---------RLYYGASNPK----GG 108
                      +  ++V  EP    A  + +  +          RL  G    +     G
Sbjct: 64  -------PFKADQTVFVKSEP---IAGLLRVQDMPSLLPSKKCLRLILGQRCVRQTSMFG 113

Query: 109 GIENGTQFYTL-------------------ATCHHSPEIYPGISEQRSRQIIQDFFKE 147
           G  +    +                      +   S  +  G+  + +  +++ F+ +
Sbjct: 114 GTGSILSLHAEFVLAFPWTYTPDAKLIYASRSIDPSYPVQGGLFHKEAIMLLRRFYIQ 171


>gi|295099508|emb|CBK88597.1| Deoxycytidylate deaminase [Eubacterium cylindroides T2-87]
          Length = 164

 Score = 73.0 bits (179), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 33/130 (25%), Positives = 49/130 (37%), Gaps = 32/130 (24%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAV-LNNKIISRAGNRNRELKD----VTA 52
           +     FMS A   A+ +      P   VGA  V    +++    N   +  D      A
Sbjct: 7   LSWDEYFMSMAHLSAKRSKD----PSTQVGACIVNSQKRVVGLGYNGFPKGCDDNEFPWA 62

Query: 53  --------------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98
                         HAE+ AI     + S + L    +YV+L PC  CA AI  + I+ +
Sbjct: 63  RDGEFLDTKYPYVVHAELNAI-----LNSIQDLNGCTIYVSLFPCNECAKAIIQSGIKCV 117

Query: 99  YYGASNPKGG 108
            Y  S+   G
Sbjct: 118 VY-ESDKYAG 126


>gi|110598481|ref|ZP_01386752.1| CMP/dCMP deaminase, zinc-binding [Chlorobium ferrooxidans DSM
           13031]
 gi|110339931|gb|EAT58435.1| CMP/dCMP deaminase, zinc-binding [Chlorobium ferrooxidans DSM
           13031]
          Length = 177

 Score = 73.0 bits (179), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 37/152 (24%), Positives = 55/152 (36%), Gaps = 32/152 (21%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGN--------------------- 42
              FMS A   ++ A       +GAV V ++ I+S   N                     
Sbjct: 29  HEYFMSVAHLISRRATCTRGH-IGAVIVRDHNILSTGYNGAPSGLPHCNETTCRIYRSTH 87

Query: 43  ---RNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLY 99
                 E    T HAEI AI M  +      + E D+Y+T  PC  C   +    I+ +Y
Sbjct: 88  PDGTVEENCVNTIHAEINAIAMAAKHGVS--IGEADIYITSSPCIHCLKVLINVGIKTIY 145

Query: 100 YGASNPKGGGIENGTQFYTLATCHHSPEIYPG 131
           Y     K   IE+  +   L+      ++ PG
Sbjct: 146 Y----DKPYKIEHIDELLRLSGI-RLVQVSPG 172


>gi|294630170|ref|ZP_06708730.1| riboflavin/cytosine deaminase [Streptomyces sp. e14]
 gi|292833503|gb|EFF91852.1| riboflavin/cytosine deaminase [Streptomyces sp. e14]
          Length = 422

 Score = 73.0 bits (179), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 32/118 (27%), Positives = 44/118 (37%), Gaps = 23/118 (19%)

Query: 4   GNVFMSCALEEA------QNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEI 56
              ++  A E A        A       VGAV V  +   ++R  +R  E  D  AHAE 
Sbjct: 274 DRHWLRIACELALLCPPSATAFS-----VGAVVVAADGTELARGHSR--EAGDPVAHAEE 326

Query: 57  LAIRMGCRILSQEILPEVDLYVTLEPCT-------MCAAAISLARIRRLYYGASNPKG 107
            A+       +   LP   +Y +LEPC         CA  I  A +RR+      P  
Sbjct: 327 AAL--AKIDPADPRLPGATVYSSLEPCARRASRPRPCARLILDAGVRRVVTAWREPDT 382


>gi|121609770|ref|YP_997577.1| riboflavin biosynthesis protein RibD [Verminephrobacter eiseniae
           EF01-2]
 gi|121554410|gb|ABM58559.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Verminephrobacter eiseniae EF01-2]
          Length = 371

 Score = 73.0 bits (179), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 39/150 (26%), Positives = 57/150 (38%), Gaps = 20/150 (13%)

Query: 10  CALEEAQNAALRNEI-P-VGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
            AL+ A     R    P VG V       +I R            AHAEI+A+R      
Sbjct: 11  EALDLAHQGLYRTSPNPRVGCVIADAAGVVIGRGSTGPAGG----AHAEIMALRNAAA-- 64

Query: 67  SQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
               +     YVTLEPC+       C  A+  A I ++    ++P       G  F  L 
Sbjct: 65  GGHSVRGATAYVTLEPCSHHGRTGPCCDALVAAGIAKVVASLTDPNPLVAGQG--FARLR 122

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFF-KERR 149
               + ++ PG   Q +R++   FF +  R
Sbjct: 123 AAGVAVQVGPG--AQAARELNVGFFSRMLR 150


>gi|304384459|ref|ZP_07366862.1| competence protein ComEB [Prevotella marshii DSM 16973]
 gi|304334453|gb|EFM00743.1| competence protein ComEB [Prevotella marshii DSM 16973]
          Length = 147

 Score = 73.0 bits (179), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 30/110 (27%), Positives = 43/110 (39%), Gaps = 15/110 (13%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRN--------RELKDVT---- 51
              ++  A   A+N+  +    VGA+ V +  IIS   N           +  + T    
Sbjct: 11  DLRYLRMARIWAENSYCQRRK-VGALVVKDKMIISDGYNGTPSGFENICEDEDNTTKPYV 69

Query: 52  AHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
            HAE  AI    R  +        LYVT  PC  C+  I  A I+R+ Y 
Sbjct: 70  LHAEANAITKLARSSNNSD--NSTLYVTASPCIECSKLIIQAGIKRVVYA 117


>gi|319953260|ref|YP_004164527.1| cmp/dcmp deaminase zinc-binding protein [Cellulophaga algicola DSM
           14237]
 gi|319421920|gb|ADV49029.1| CMP/dCMP deaminase zinc-binding protein [Cellulophaga algicola DSM
           14237]
          Length = 146

 Score = 73.0 bits (179), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 38/147 (25%), Positives = 55/147 (37%), Gaps = 25/147 (17%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRN-----RELKDV------ 50
           K    ++  A E  + +  + +  VGA+ V +  IIS   N        + +D       
Sbjct: 8   KYDKAYLRMASEWGKLSFCKRKQ-VGAIIVKDRMIISDGYNGTPTGFENQCEDGDGYTKW 66

Query: 51  -TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY--GASNPKG 107
              HAE  AI                LY+TL PC  C+  I  + I+R+ Y  G  +   
Sbjct: 67  YVLHAEANAISKVAASTQS--CNGATLYITLSPCKECSKLIHQSGIKRVVYQNGYKDD-- 122

Query: 108 GGIENGTQFYTLAT--CHHSPEIYPGI 132
               +G QF   A     H PEI   I
Sbjct: 123 ----SGLQFLQKAGVELVHLPEIKENI 145


>gi|242242866|ref|ZP_04797311.1| competence protein ComEB [Staphylococcus epidermidis W23144]
 gi|242233679|gb|EES35991.1| competence protein ComEB [Staphylococcus epidermidis W23144]
 gi|319400925|gb|EFV89144.1| comE operon protein 2 [Staphylococcus epidermidis FRI909]
          Length = 153

 Score = 73.0 bits (179), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 29/116 (25%), Positives = 45/116 (38%), Gaps = 18/116 (15%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRE-------------- 46
           +K    FM+ +   A  +  R  + VGA  V +N+II+   N +                
Sbjct: 4   IKWEEYFMAQSHLLALRSTCRR-LSVGATIVKDNRIIAGGYNGSVAGEVHCIDEGCLIED 62

Query: 47  -LKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
                T HAE+ A+    +           +YVT  PC  C  +I  A I+ +YY 
Sbjct: 63  GHCIRTIHAEMNALLQCAKQGVST--EGATIYVTHFPCLNCTKSIIQAGIKTIYYA 116


>gi|237737703|ref|ZP_04568184.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase
           [Fusobacterium mortiferum ATCC 9817]
 gi|229419583|gb|EEO34630.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase
           [Fusobacterium mortiferum ATCC 9817]
          Length = 358

 Score = 73.0 bits (179), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 34/166 (20%), Positives = 52/166 (31%), Gaps = 51/166 (30%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGN-----------------RNRE 46
              +M+ ALE A  A     +                 N                     
Sbjct: 2   DKKYMARALELA--ALGEGSV-----------------NPNPLVGAVVVKDGVVVGEGYH 42

Query: 47  LKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYY 100
            K    HAE+ A+ M             D+YVTLEPC        CA  I    I+R   
Sbjct: 43  KKYGGPHAEVFALEMAGEKAY-----GADIYVTLEPCSHYGKTPPCAKKIIEMGIKRCIV 97

Query: 101 GASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
            + +P       G +    A      E+  G+ E+ ++++ + F K
Sbjct: 98  ASLDPNPLVSGRGIKMLQDAG----IEVVTGVMEREAKELNRVFMK 139


>gi|332829184|gb|EGK01848.1| hypothetical protein HMPREF9455_01996 [Dysgonomonas gadei ATCC
           BAA-286]
          Length = 147

 Score = 73.0 bits (179), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 31/109 (28%), Positives = 41/109 (37%), Gaps = 15/109 (13%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRN------------RELKDVT 51
              +M  A   A+N+       VGA+ V +  IIS   N               E K   
Sbjct: 10  DERYMRMAAIWAENSYCVRRK-VGALIVKDKMIISDGYNGTPAGFENICEDENNETKPYV 68

Query: 52  AHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
            HAE  AI       +  +     +YVT  PC  CA  I  A I+R+ Y
Sbjct: 69  LHAEANAITKVACSHNSSM--GATMYVTTSPCIECAKLIIQAGIKRVVY 115


>gi|153005122|ref|YP_001379447.1| CMP/dCMP deaminase [Anaeromyxobacter sp. Fw109-5]
 gi|152028695|gb|ABS26463.1| CMP/dCMP deaminase zinc-binding [Anaeromyxobacter sp. Fw109-5]
          Length = 164

 Score = 73.0 bits (179), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 29/113 (25%), Positives = 39/113 (34%), Gaps = 18/113 (15%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRE---------------LK 48
              FM+ A   A  A    +  VGAV V +  I+S   N +                   
Sbjct: 8   DEYFMNVARVVASRATCDRKH-VGAVLVRDKTILSTGYNGSIRGLPHCSEAGHMMEDGHC 66

Query: 49  DVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
             T HAE  AI    +      +    +Y T  PC  C   I  A  RR+ +G
Sbjct: 67  VATVHAEANAIIQAAKNGVA--IDGATIYTTASPCWPCFKLIGNAGCRRIVFG 117


>gi|298291639|ref|YP_003693578.1| riboflavin biosynthesis protein RibD [Starkeya novella DSM 506]
 gi|296928150|gb|ADH88959.1| riboflavin biosynthesis protein RibD [Starkeya novella DSM 506]
          Length = 370

 Score = 73.0 bits (179), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 30/147 (20%), Positives = 45/147 (30%), Gaps = 25/147 (17%)

Query: 4   GNVFMSCALEEAQNAALRN--EIPVGAVAVLNNK----IISRAGNRNRELKDVTAHAEIL 57
               M+ AL   +           VGA+ V        ++ R        K    HAE  
Sbjct: 7   DEALMAAALSVGRRELGHTWPNPAVGALVVRETGGAPVVLGRGW----TSKGGRPHAEPQ 62

Query: 58  AIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIE 111
           A+         E      LYVTLEPC        C  A+  + + R+     +P      
Sbjct: 63  ALAQAG-----EGARGATLYVTLEPCSHHGLTPPCVDAVRASGVARVVAAIEDPDFRVAG 117

Query: 112 NGTQFYTLATCHHSPEIYPGISEQRSR 138
            G      A      ++  G+    +R
Sbjct: 118 RGFSLLREAG----IDVEVGVGAPEAR 140


>gi|41407234|ref|NP_960070.1| RibG [Mycobacterium avium subsp. paratuberculosis K-10]
 gi|41395585|gb|AAS03453.1| RibG [Mycobacterium avium subsp. paratuberculosis K-10]
          Length = 341

 Score = 73.0 bits (179), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 31/151 (20%), Positives = 53/151 (35%), Gaps = 22/151 (14%)

Query: 8   MSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M  A+E++           PVGAV +     +   G       D   HAEILA+R    +
Sbjct: 13  MHLAIEQSNQVKGNTYPNPPVGAVVLDGRGEVVGVGGTEPAGGD---HAEILALRRAGDL 69

Query: 66  LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
                     + VTLEPC        C  A+  A +  + Y  ++P         +    
Sbjct: 70  A-----AGGTVVVTLEPCNHHGKTPPCVDALLEAGVGTVVYAVADPNPQAAGGAGRLQEA 124

Query: 120 ATCHHSPEIYPGISEQR-SRQIIQDFFKERR 149
                   +  G+     S   ++++  ++R
Sbjct: 125 -----GVTVRSGLLADEVSGGPLREWLHKQR 150


>gi|313894732|ref|ZP_07828293.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Selenomonas sp. oral taxon 137 str. F0430]
 gi|320531057|ref|ZP_08032086.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Selenomonas artemidis F0399]
 gi|312976641|gb|EFR42095.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Selenomonas sp. oral taxon 137 str. F0430]
 gi|320136639|gb|EFW28592.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Selenomonas artemidis F0399]
          Length = 159

 Score = 73.0 bits (179), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 30/122 (24%), Positives = 40/122 (32%), Gaps = 31/122 (25%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNK-IISRAGN-RNRELKDV----- 50
           +     FM  A+  A  +      P   VGA  V  +K I+    N       D      
Sbjct: 3   ITWDEYFMGIAIFSAYRSKD----PHTQVGACIVNEDKHIVGVGYNGMPNGCDDSEYPWG 58

Query: 51  ------------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98
                         HAE+ AI           L    +YV+L PC  C  AI  + IR +
Sbjct: 59  RTGEFADQKYPYVVHAELNAILNA-----STSLKGCRIYVSLFPCNECCKAIIQSGIREV 113

Query: 99  YY 100
            Y
Sbjct: 114 VY 115


>gi|145594417|ref|YP_001158714.1| riboflavin biosynthesis protein RibD [Salinispora tropica CNB-440]
 gi|145303754|gb|ABP54336.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase /
           diaminohydroxyphosphoribosylaminopyrimidine deaminase
           [Salinispora tropica CNB-440]
          Length = 353

 Score = 73.0 bits (179), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 25/142 (17%), Positives = 43/142 (30%), Gaps = 25/142 (17%)

Query: 8   MSCALEEAQNAALR---NEIPVGAVAVLNN-KIISRAGNRNRELKDVTAHAEILAIRMGC 63
           M  A++ A         N + VG V +    +++    +          HAEI+A+    
Sbjct: 10  MRRAVDLAARGLGTTSPNPV-VGCVLLDPGGQVVGEGFHAYAGG----PHAEIVALAHAG 64

Query: 64  RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFY 117
                E        VTLEPC        C+ A+  A + R+     +P            
Sbjct: 65  -----ERARGGTAVVTLEPCDHTGRTGPCSTALVQAGVARVVIAVPDPNQAASGGAATLR 119

Query: 118 TLATCHHSPEIYPGISEQRSRQ 139
                     +  G+    +  
Sbjct: 120 AA-----GVRVDLGVRAAEAEA 136


>gi|157123926|ref|XP_001653977.1| cytidine and deoxycytidylate deaminase zinc-binding region [Aedes
           aegypti]
 gi|108882879|gb|EAT47104.1| cytidine and deoxycytidylate deaminase zinc-binding region [Aedes
           aegypti]
          Length = 387

 Score = 73.0 bits (179), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 25/87 (28%), Positives = 46/87 (52%), Gaps = 7/87 (8%)

Query: 43  RNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGA 102
            +  L D++ H + LA           +    D+Y+T EPC MCA A++ +R+RR++Y  
Sbjct: 305 ESISLDDISPHEDNLA------KYGPYLCTGYDVYLTHEPCIMCAMALTHSRVRRVFYHF 358

Query: 103 SNPKGGGIENGTQFYTLATCHHSPEIY 129
           +  K GG+ + T+ +     +H  E++
Sbjct: 359 NTAK-GGLGSITKVHCAKGLNHHYEVF 384


>gi|332523517|ref|ZP_08399769.1| putative ComE operon protein 2 [Streptococcus porcinus str.
           Jelinkova 176]
 gi|332314781|gb|EGJ27766.1| putative ComE operon protein 2 [Streptococcus porcinus str.
           Jelinkova 176]
          Length = 152

 Score = 73.0 bits (179), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 26/90 (28%), Positives = 37/90 (41%), Gaps = 17/90 (18%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKD---------------VTAHAEILAIRMGCRILSQEI 70
           VGAV V +N+II+   N      D                T HAE+ A+    +      
Sbjct: 29  VGAVLVKDNRIIATGYNGGVSATDNCNEAGHYMEDGHCIRTVHAEMNALIQCAKEGISTD 88

Query: 71  LPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
               +LYVT  PC  C  A+  A I+++ Y
Sbjct: 89  --GTELYVTHFPCINCTKALLQAGIKKITY 116


>gi|89897671|ref|YP_521158.1| hypothetical protein DSY4925 [Desulfitobacterium hafniense Y51]
 gi|219670820|ref|YP_002461255.1| CMP/dCMP deaminase zinc-binding [Desulfitobacterium hafniense
           DCB-2]
 gi|89337119|dbj|BAE86714.1| hypothetical protein [Desulfitobacterium hafniense Y51]
 gi|219541080|gb|ACL22819.1| CMP/dCMP deaminase zinc-binding [Desulfitobacterium hafniense
           DCB-2]
          Length = 155

 Score = 73.0 bits (179), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 29/133 (21%), Positives = 48/133 (36%), Gaps = 30/133 (22%)

Query: 4   GNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGN--------------RNREL 47
              FM  A   A  +    R    VGAV V + +I+S   N                ++L
Sbjct: 10  DEYFMQMAQVVAGRSTCLRRQ---VGAVIVKDKQILSTGYNGSPTGLSHCAQKGCLRQQL 66

Query: 48  KDVTA---------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98
              +          HAE  A+    +      +   D+Y T +PC +C   +  A I+R+
Sbjct: 67  GIPSGERTEICRAVHAEQNALVQAAKHGVS--INGADIYTTFQPCVLCTKLLINAGIKRV 124

Query: 99  YYGASNPKGGGIE 111
           ++    P    +E
Sbjct: 125 FFLYPYPDSLALE 137


>gi|315282387|ref|ZP_07870809.1| ComE operon protein 2 [Listeria marthii FSL S4-120]
 gi|313613969|gb|EFR87691.1| ComE operon protein 2 [Listeria marthii FSL S4-120]
          Length = 186

 Score = 73.0 bits (179), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 25/91 (27%), Positives = 38/91 (41%), Gaps = 17/91 (18%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKD---------------VTAHAEILAIRMGCRILSQEI 70
           VGA  V + +II+   N +    D                T HAE+ AI    +  +   
Sbjct: 28  VGATIVRDKRIIAGGYNGSIAGGDHCAEHGCYVVDGHCIRTIHAEMNAILQCAKFGATTD 87

Query: 71  LPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
               +LYVT  PC  C  +I  A I+++Y+ 
Sbjct: 88  --NAELYVTHFPCLACTKSIIQAGIKKVYFA 116


>gi|270294283|ref|ZP_06200485.1| conserved hypothetical protein [Bacteroides sp. D20]
 gi|270275750|gb|EFA21610.1| conserved hypothetical protein [Bacteroides sp. D20]
          Length = 152

 Score = 73.0 bits (179), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 27/87 (31%), Positives = 36/87 (41%), Gaps = 14/87 (16%)

Query: 26  VGAVAVLNNKIISRAGNRN--------RELKDVT----AHAEILAIRMGCRILSQEILPE 73
           VGA+ V +  IIS   N           +  +VT     HAE  AI    R  +      
Sbjct: 34  VGALIVKDKMIISDGYNGTPSGFENVCEDENNVTKPYVLHAEANAITKIARSNNSSN--G 91

Query: 74  VDLYVTLEPCTMCAAAISLARIRRLYY 100
             +YVT  PC  C+  I  A I+R+ Y
Sbjct: 92  ATMYVTASPCIECSKLIIQAGIKRVVY 118


>gi|223044386|ref|ZP_03614420.1| ComE operon protein 2 [Staphylococcus capitis SK14]
 gi|222442255|gb|EEE48366.1| ComE operon protein 2 [Staphylococcus capitis SK14]
          Length = 153

 Score = 73.0 bits (179), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 28/116 (24%), Positives = 45/116 (38%), Gaps = 18/116 (15%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRE-------------- 46
           +K    FM+ +   A  +  +  + VGA  V +N+II+   N +                
Sbjct: 4   IKWEEYFMAQSHLLALRSTCQR-LSVGATIVKDNRIIAGGYNGSVAGEVHCIDEGCLIED 62

Query: 47  -LKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
                T HAE+ A+    +           +YVT  PC  C  +I  A I+ +YY 
Sbjct: 63  GHCIRTIHAEMNALLQCAKQGVST--EGATIYVTHFPCLNCTKSIIQAGIKTIYYA 116


>gi|292669313|ref|ZP_06602739.1| deoxycytidylate deaminase [Selenomonas noxia ATCC 43541]
 gi|292649154|gb|EFF67126.1| deoxycytidylate deaminase [Selenomonas noxia ATCC 43541]
          Length = 158

 Score = 73.0 bits (179), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 30/122 (24%), Positives = 40/122 (32%), Gaps = 31/122 (25%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNK-IISRAGN-RNRELKDVTA--- 52
           +     FM  A+  A  +      P   VGA  V  +K I+    N       D      
Sbjct: 3   ISWDEYFMGVAIFSAYRSKD----PHTQVGACIVNEDKHIVGVGYNGMPNGCDDSVYPWG 58

Query: 53  --------------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98
                         HAE+ AI           L    +YV+L PC  C  AI  + IR +
Sbjct: 59  RTGDFADQKYPYVVHAELNAILNA-----STSLKGCRIYVSLFPCNECCKAIIQSGIREV 113

Query: 99  YY 100
            Y
Sbjct: 114 VY 115


>gi|326502140|dbj|BAK06562.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 418

 Score = 73.0 bits (179), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 17/58 (29%), Positives = 31/58 (53%)

Query: 72  PEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIY 129
              D+Y+  EPCTMCA A+   R +R++Y   NP  G + +  + +   + +H   ++
Sbjct: 335 TGFDIYLVWEPCTMCAMALVHQRFKRVFYAFPNPVTGALGSVYRLHGKKSLNHHYSVF 392


>gi|251811005|ref|ZP_04825478.1| competence protein ComEB [Staphylococcus epidermidis BCM-HMP0060]
 gi|251805515|gb|EES58172.1| competence protein ComEB [Staphylococcus epidermidis BCM-HMP0060]
 gi|329737260|gb|EGG73514.1| ComE operon protein 2 [Staphylococcus epidermidis VCU028]
          Length = 153

 Score = 73.0 bits (179), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 28/116 (24%), Positives = 45/116 (38%), Gaps = 18/116 (15%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRE-------------- 46
           +K    FM+ +   A  +  +  + VGA  V +N+II+   N +                
Sbjct: 4   IKWEEYFMAQSHLLALRSTCKR-LSVGATIVKDNRIIAGGYNGSVAGEVHCIDEGCLIED 62

Query: 47  -LKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
                T HAE+ A+    +           +YVT  PC  C  +I  A I+ +YY 
Sbjct: 63  GHCIRTIHAEMNALLQCAKQGVST--EGATIYVTHFPCLNCTKSIIQAGIKTIYYA 116


>gi|262197671|ref|YP_003268880.1| CMP/dCMP deaminase zinc-binding protein [Haliangium ochraceum DSM
           14365]
 gi|262081018|gb|ACY16987.1| CMP/dCMP deaminase zinc-binding protein [Haliangium ochraceum DSM
           14365]
          Length = 153

 Score = 73.0 bits (179), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 31/113 (27%), Positives = 44/113 (38%), Gaps = 18/113 (15%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRE---------------LK 48
              FMS AL  A  +    +  VGAV V +  I+S   N +                   
Sbjct: 13  DEYFMSIALVVATRSTCHRKY-VGAVIVRDRTILSTGYNGSIRGMPHCTDVGHMMEGGHC 71

Query: 49  DVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
             T HAE+ AI    +  +  ++ +  LYVT  PC  C    + A I R+ Y 
Sbjct: 72  VATIHAEVNAIIQAAK--NGVVIDKATLYVTASPCWNCFKQAANAGIERICYA 122


>gi|313608725|gb|EFR84550.1| ComE operon protein 2 [Listeria monocytogenes FSL F2-208]
          Length = 186

 Score = 73.0 bits (179), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 25/91 (27%), Positives = 39/91 (42%), Gaps = 17/91 (18%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKD---------------VTAHAEILAIRMGCRILSQEI 70
           VGA  V + +II+   N +    D                T HAE+ AI    +  +   
Sbjct: 28  VGATIVRDKRIIAGGYNGSIAGGDHCAEHGCYVVDGHCIRTIHAEMNAILQCAKFGATTD 87

Query: 71  LPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
             + +LYVT  PC  C  +I  A I+++Y+ 
Sbjct: 88  --KAELYVTHFPCLACTKSIIQAGIKKVYFA 116


>gi|189346358|ref|YP_001942887.1| CMP/dCMP deaminase zinc-binding [Chlorobium limicola DSM 245]
 gi|189340505|gb|ACD89908.1| CMP/dCMP deaminase zinc-binding [Chlorobium limicola DSM 245]
          Length = 174

 Score = 73.0 bits (179), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 30/121 (24%), Positives = 44/121 (36%), Gaps = 27/121 (22%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGN-------RNRELK-------- 48
              FMS A   ++ A       +GAV V ++ I+S   N          E          
Sbjct: 29  HEYFMSVAHLISRRATCTRGH-IGAVIVRDHNILSTGYNGAPSGLPHCNETNCRIYRSTH 87

Query: 49  -DVTA--------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLY 99
            D T         HAEI AI    +      + + D+Y+T  PC  C   +    I+ +Y
Sbjct: 88  PDGTIEENCVNTIHAEINAIAQAAKHGVS--IKDADIYITASPCIHCLKVLINVGIKTIY 145

Query: 100 Y 100
           Y
Sbjct: 146 Y 146


>gi|329962142|ref|ZP_08300153.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Bacteroides fluxus YIT 12057]
 gi|328530790|gb|EGF57648.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Bacteroides fluxus YIT 12057]
          Length = 146

 Score = 73.0 bits (179), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 28/87 (32%), Positives = 36/87 (41%), Gaps = 14/87 (16%)

Query: 26  VGAVAVLNNKIISRAGNRN--------RELKDVT----AHAEILAIRMGCRILSQEILPE 73
           VGA+ V +  IIS   N           +  +VT     HAE  AI    R  +      
Sbjct: 34  VGALIVKDQMIISDGYNGTPAGFENICEDENNVTKPYVLHAEANAITKIARSNNSSD--G 91

Query: 74  VDLYVTLEPCTMCAAAISLARIRRLYY 100
             +YVT  PC  CA  I  A I+R+ Y
Sbjct: 92  ATMYVTASPCIECAKLIIQAGIKRVVY 118


>gi|138896089|ref|YP_001126542.1| late competence protein ComEB [Geobacillus thermodenitrificans
           NG80-2]
 gi|196248983|ref|ZP_03147683.1| ComE operon protein 2 [Geobacillus sp. G11MC16]
 gi|134267602|gb|ABO67797.1| Late competence protein ComEB [Geobacillus thermodenitrificans
           NG80-2]
 gi|196211859|gb|EDY06618.1| ComE operon protein 2 [Geobacillus sp. G11MC16]
          Length = 155

 Score = 73.0 bits (179), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 30/116 (25%), Positives = 44/116 (37%), Gaps = 18/116 (15%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELK-----------D 49
           M     FM+ +   A  +     + VGA  V + +II+   N +               D
Sbjct: 4   MTWDQYFMAQSHLLALRSTCTR-LAVGATIVRDKRIIAGGYNGSIAGGAHCIDEGCYVID 62

Query: 50  V----TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
                T HAE+ AI    +          ++YVT  PC  C  AI  + IR +YY 
Sbjct: 63  GHCVRTIHAEMNAILQCAKFGVPT--EGAEMYVTHFPCLHCCKAIIQSGIRAVYYA 116


>gi|241950489|ref|XP_002417967.1| deoxycytidylate deaminase (dCMP deaminase), putative [Candida
           dubliniensis CD36]
 gi|223641305|emb|CAX45685.1| deoxycytidylate deaminase (dCMP deaminase), putative [Candida
           dubliniensis CD36]
          Length = 337

 Score = 73.0 bits (179), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 30/123 (24%), Positives = 43/123 (34%), Gaps = 31/123 (25%)

Query: 4   GNVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGN---RNRELKD--------- 49
            + FM  A + A  A   N  +  VG V V  N++I+   N   R+    +         
Sbjct: 189 DSYFMRLA-DLA--ALRSNCMKRRVGCVIVRENRVIATGYNGTPRHLTNCNEGGCSRCNK 245

Query: 50  --------VT---AHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98
                    T    HAE  A+    R     I  E  LY    PC  C+  I  + I+ +
Sbjct: 246 GQGSGALLATCLCLHAEENALLEAGR---DRIRGESVLYCNTCPCLTCSIKIVQSGIKEV 302

Query: 99  YYG 101
            Y 
Sbjct: 303 VYA 305


>gi|257064835|ref|YP_003144507.1| deoxycytidylate deaminase [Slackia heliotrinireducens DSM 20476]
 gi|256792488|gb|ACV23158.1| deoxycytidylate deaminase [Slackia heliotrinireducens DSM 20476]
          Length = 156

 Score = 73.0 bits (179), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 27/127 (21%), Positives = 45/127 (35%), Gaps = 28/127 (22%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGN--------------RNRELKD 49
              FM  A E ++ +       VGAV V + +I++   N                ++L  
Sbjct: 13  DEYFMHLAFEVSKRSTCLR-RAVGAVIVKDRRILATGYNGVPSGLRHCDETGCLRQQLNV 71

Query: 50  VTA---------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
            +          HAE  AI    R      +    +Y+T +PC +C   +  A I  + Y
Sbjct: 72  PSGQRHEICRGLHAEQNAIIQAARY--GIDIAGSSIYITTQPCVVCTKMLINAGITEVVY 129

Query: 101 --GASNP 105
             G  + 
Sbjct: 130 AEGYPDE 136


>gi|313633202|gb|EFS00080.1| ComE operon protein 2 [Listeria seeligeri FSL N1-067]
 gi|313637784|gb|EFS03135.1| ComE operon protein 2 [Listeria seeligeri FSL S4-171]
          Length = 186

 Score = 72.6 bits (178), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 25/91 (27%), Positives = 39/91 (42%), Gaps = 17/91 (18%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKD---------------VTAHAEILAIRMGCRILSQEI 70
           VGA  V + +II+   N +    D                T HAE+ AI    +  +   
Sbjct: 28  VGATIVRDKRIIAGGYNGSIAGGDHCAEHGCYVVDGHCIRTIHAEMNAILQCAKFGATTD 87

Query: 71  LPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
             + +LYVT  PC  C  +I  A I+++Y+ 
Sbjct: 88  --QAELYVTHFPCLACTKSIIQAGIKKVYFA 116


>gi|242373893|ref|ZP_04819467.1| competence protein ComEB [Staphylococcus epidermidis M23864:W1]
 gi|242348447|gb|EES40049.1| competence protein ComEB [Staphylococcus epidermidis M23864:W1]
          Length = 153

 Score = 72.6 bits (178), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 28/116 (24%), Positives = 45/116 (38%), Gaps = 18/116 (15%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRE-------------- 46
           +K    FM+ +   A  +  +  + VGA  V +N+II+   N +                
Sbjct: 4   IKWEEYFMAQSHLLALRSTCQR-LSVGATIVKDNRIIAGGYNGSVAGEVHCIDEGCLIED 62

Query: 47  -LKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
                T HAE+ A+    +           +YVT  PC  C  +I  A I+ +YY 
Sbjct: 63  GHCIRTIHAEMNALLQCAKQGVST--EGATIYVTHFPCLNCTKSIIQAGIKTIYYA 116


>gi|157738249|ref|YP_001490933.1| bifunctional riboflavin biosynthesis protein RibD [Arcobacter
           butzleri RM4018]
 gi|157700103|gb|ABV68263.1| bifunctional riboflavin biosynthesis protein RibD [Arcobacter
           butzleri RM4018]
          Length = 334

 Score = 72.6 bits (178), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 33/150 (22%), Positives = 53/150 (35%), Gaps = 40/150 (26%)

Query: 1   MK-KGNVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIIS-RAGNRNRELKDVTAHAEI 56
           MK   N +M  A++EA    L       VG V V N ++++  A    +E      HAE+
Sbjct: 1   MKIDDNFYMRLAIDEAWKHQLLTYPNPAVGCVIVKNQRLLAVEAH---KEAGMP--HAEV 55

Query: 57  LAIRMGCRIL----------------------SQEILPEVDLYVTLEPC------TMCAA 88
            A++                                  + ++YVTLEPC        CA 
Sbjct: 56  NALKTAYLKDNPNSILKTKNSSFDIHQFLLQNHNGFFNDCEIYVTLEPCNHIGKTPSCAN 115

Query: 89  AISLARIRRLYYGASNPK---GGGIENGTQ 115
            +   + +R+     +P     GG+E    
Sbjct: 116 LLKELKPKRVIISVKDPNKQATGGLETLRN 145


>gi|148264239|ref|YP_001230945.1| dCMP deaminase [Geobacter uraniireducens Rf4]
 gi|146397739|gb|ABQ26372.1| dCMP deaminase [Geobacter uraniireducens Rf4]
          Length = 156

 Score = 72.6 bits (178), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 28/128 (21%), Positives = 44/128 (34%), Gaps = 32/128 (25%)

Query: 4   GNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGN--------------RNREL 47
              FM      A+ +    R    VGAV V +  I++   N                 +L
Sbjct: 7   DEYFMEITHLVAKRSTCLRRQ---VGAVIVKDKNILATGYNGAPSGVSHCLDVGCLREKL 63

Query: 48  KDVTA---------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98
              +          HAE  AI    +  +   +    LY T  PC +C+  +  A I+R+
Sbjct: 64  NIPSGERHELCRGLHAEQNAIIQAAKHGTT--IDGSTLYCTTLPCIICSKMVINAGIKRI 121

Query: 99  YY--GASN 104
            Y  G  +
Sbjct: 122 VYEVGYPD 129


>gi|320528437|ref|ZP_08029599.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Solobacterium moorei F0204]
 gi|320131351|gb|EFW23919.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Solobacterium moorei F0204]
          Length = 164

 Score = 72.6 bits (178), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 34/136 (25%), Positives = 53/136 (38%), Gaps = 33/136 (24%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNN-KIISRAGN-------------- 42
           +     FM  A   A  +      P   VGA  V +N +++S   N              
Sbjct: 8   LSWDEYFMGLAHLSALRSKD----PNTKVGAAIVDDNHRVVSVGYNGFPKGCSDEVFPWG 63

Query: 43  RNRELKDV----TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98
           R+ +  D       HAE+ AI     + S+  +    +YV+L PC  CA AI  + I R+
Sbjct: 64  RDGDTLDSKYAFVVHAELNAI-----LNSKWPVVGCTIYVSLFPCNECAKAIIQSGIHRI 118

Query: 99  YYGASNPKGGGIENGT 114
            Y   + K  G++   
Sbjct: 119 VY--ESDKYNGVDTNI 132


>gi|325104661|ref|YP_004274315.1| CMP/dCMP deaminase zinc-binding protein [Pedobacter saltans DSM
           12145]
 gi|324973509|gb|ADY52493.1| CMP/dCMP deaminase zinc-binding protein [Pedobacter saltans DSM
           12145]
          Length = 157

 Score = 72.6 bits (178), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 33/117 (28%), Positives = 49/117 (41%), Gaps = 23/117 (19%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGN-----------------RNRE 46
             +FM+ A + AQ +       VGAV   + +IIS   N                   R+
Sbjct: 6   DQIFMNLASDLAQKSHCVKNH-VGAVLTKDTRIISIGYNGPPAGTHNCDEEWPEEGCPRD 64

Query: 47  LKDVTA---HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
            K+  +   HAE  AI    +  +Q  +    LY TL PC  CA  I  + I+R++Y
Sbjct: 65  SKNSCSLALHAEENAILYAVKNGAQ--IQGATLYTTLSPCISCARLIYASGIQRVFY 119


>gi|160890970|ref|ZP_02071973.1| hypothetical protein BACUNI_03415 [Bacteroides uniformis ATCC 8492]
 gi|317481497|ref|ZP_07940562.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Bacteroides sp. 4_1_36]
 gi|156859191|gb|EDO52622.1| hypothetical protein BACUNI_03415 [Bacteroides uniformis ATCC 8492]
 gi|316902343|gb|EFV24232.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Bacteroides sp. 4_1_36]
          Length = 153

 Score = 72.6 bits (178), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 27/87 (31%), Positives = 36/87 (41%), Gaps = 14/87 (16%)

Query: 26  VGAVAVLNNKIISRAGNRN--------RELKDVT----AHAEILAIRMGCRILSQEILPE 73
           VGA+ V +  IIS   N           +  +VT     HAE  AI    R  +      
Sbjct: 35  VGALIVKDKMIISDGYNGTPSGFENVCEDENNVTKPYVLHAEANAITKIARSNNSSN--G 92

Query: 74  VDLYVTLEPCTMCAAAISLARIRRLYY 100
             +YVT  PC  C+  I  A I+R+ Y
Sbjct: 93  ATMYVTASPCIECSKLIIQAGIKRVVY 119


>gi|150024567|ref|YP_001295393.1| dCMP deaminase [Flavobacterium psychrophilum JIP02/86]
 gi|149771108|emb|CAL42575.1| dCMP deaminase [Flavobacterium psychrophilum JIP02/86]
          Length = 142

 Score = 72.6 bits (178), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 31/111 (27%), Positives = 45/111 (40%), Gaps = 15/111 (13%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGN-------RNRELKDVTA-- 52
           K    ++  A E ++ +    +  VGA+ V +  IIS   N          E +D T   
Sbjct: 8   KYDKAYLRLAKEWSKLSYCNRKQ-VGAIIVRDKMIISDGYNGSPSGFENCCEEQDGTTKW 66

Query: 53  ---HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
              HAE  AI    R           LY+TL PC  C+  I  + I+R+ Y
Sbjct: 67  YILHAEANAILKVARSTQS--CEGATLYITLSPCKECSKLIHQSGIKRVVY 115


>gi|159044799|ref|YP_001533593.1| riboflavin biosynthesis protein [Dinoroseobacter shibae DFL 12]
 gi|157912559|gb|ABV93992.1| riboflavin biosynthesis protein [Dinoroseobacter shibae DFL 12]
          Length = 365

 Score = 72.6 bits (178), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 30/148 (20%), Positives = 49/148 (33%), Gaps = 22/148 (14%)

Query: 1   MKKGNVFMSCALEEAQNAALRN--EIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEIL 57
           M     +M  AL   +    ++     VG V V  N +++ R   R +       HAE++
Sbjct: 1   MSDDLRWMQVALTLGRRGLGQSWPNPAVGCVLVAPNGRVVGRG--RTQSGGRP--HAEVV 56

Query: 58  AIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIE 111
                    +         YVTLEPC        C  A+  A + R+     +P      
Sbjct: 57  -----ALAQAGAAARGATAYVTLEPCAHHGQTGPCCDALIAAGVGRVVTALEDPDPRVAG 111

Query: 112 NGTQFYTLATCHHSPEIYPGISEQRSRQ 139
            G      A       +  G+    +R+
Sbjct: 112 QGHSRLRAAG----VAVTEGVGRAAARE 135


>gi|330686098|gb|EGG97719.1| ComE operon protein 2 [Staphylococcus epidermidis VCU121]
          Length = 153

 Score = 72.6 bits (178), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 28/116 (24%), Positives = 45/116 (38%), Gaps = 18/116 (15%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRE-------------- 46
           +K    FM+ +   A  +  +  + VGA  V +N+II+   N +                
Sbjct: 4   IKWEEYFMAQSHLLALRSTCQR-LSVGATIVKDNRIIAGGYNGSVAGEVHCIDEGCLIED 62

Query: 47  -LKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
                T HAE+ A+    +           +YVT  PC  C  +I  A I+ +YY 
Sbjct: 63  GHCIRTIHAEMNALLQCAKQGVST--EGATIYVTHFPCLNCTKSIIQAGIKTIYYA 116


>gi|284801870|ref|YP_003413735.1| hypothetical protein LM5578_1625 [Listeria monocytogenes 08-5578]
 gi|284995012|ref|YP_003416780.1| hypothetical protein LM5923_1577 [Listeria monocytogenes 08-5923]
 gi|284057432|gb|ADB68373.1| hypothetical protein LM5578_1625 [Listeria monocytogenes 08-5578]
 gi|284060479|gb|ADB71418.1| hypothetical protein LM5923_1577 [Listeria monocytogenes 08-5923]
          Length = 186

 Score = 72.6 bits (178), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 25/91 (27%), Positives = 39/91 (42%), Gaps = 17/91 (18%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKD---------------VTAHAEILAIRMGCRILSQEI 70
           VGA  V + +II+   N +    D                T HAE+ AI    +  +   
Sbjct: 28  VGATIVRDKRIIAGGYNGSIAGGDHCAEHGCYVVDGHCIRTIHAEMNAILQCAKFGATTD 87

Query: 71  LPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
             + +LYVT  PC  C  +I  A I+++Y+ 
Sbjct: 88  --KAELYVTHFPCLACTKSIIQAGIKKVYFA 116


>gi|239637600|ref|ZP_04678572.1| ComE operon protein 2 [Staphylococcus warneri L37603]
 gi|239596818|gb|EEQ79343.1| ComE operon protein 2 [Staphylococcus warneri L37603]
          Length = 153

 Score = 72.6 bits (178), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 28/116 (24%), Positives = 45/116 (38%), Gaps = 18/116 (15%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRE-------------- 46
           +K    FM+ +   A  +  +  + VGA  V +N+II+   N +                
Sbjct: 4   IKWEEYFMAQSHLLALRSTCQR-LSVGATIVKDNRIIAGGYNGSVAGEVHCIDEGCLIED 62

Query: 47  -LKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
                T HAE+ A+    +           +YVT  PC  C  +I  A I+ +YY 
Sbjct: 63  GHCIRTIHAEMNALLQCAKQGVST--EGATIYVTHFPCLNCTKSIIQAGIKTIYYA 116


>gi|154491043|ref|ZP_02030984.1| hypothetical protein PARMER_00962 [Parabacteroides merdae ATCC
           43184]
 gi|154088791|gb|EDN87835.1| hypothetical protein PARMER_00962 [Parabacteroides merdae ATCC
           43184]
          Length = 144

 Score = 72.6 bits (178), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 29/112 (25%), Positives = 45/112 (40%), Gaps = 15/112 (13%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRN--------RELKDVT- 51
           ++    ++  A   A+N+  +    VGA+ V +  IIS   N           +  +VT 
Sbjct: 9   LELDKRYLRMAAVWAENSYCKR-RQVGALIVKDQMIISDGYNGTPSGFENVCEDEHNVTK 67

Query: 52  ---AHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
               HAE  AI       +        +YVT  PC  CA  I  + I+R+ Y
Sbjct: 68  PYVLHAEANAITKVAASSNSS--KGATIYVTSAPCIECAKLIIQSGIKRVVY 117


>gi|314933760|ref|ZP_07841125.1| ComE operon protein 2 [Staphylococcus caprae C87]
 gi|313653910|gb|EFS17667.1| ComE operon protein 2 [Staphylococcus caprae C87]
          Length = 153

 Score = 72.6 bits (178), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 27/116 (23%), Positives = 45/116 (38%), Gaps = 18/116 (15%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRE-------------- 46
           +K    FM+ +   A  +  +  + VGA  V +N+II+   N +                
Sbjct: 4   IKWEEYFMAQSHLLALRSTCQR-LSVGATIVKDNRIIAGGYNGSVAGEVHCIDEGCLIED 62

Query: 47  -LKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
                T HAE+ A+    +           +YVT  PC  C  +I  + I+ +YY 
Sbjct: 63  GHCIRTIHAEMNALLQCAKQGVST--EGATIYVTHFPCLNCTKSIIQSGIKTIYYA 116


>gi|315303230|ref|ZP_07873879.1| ComE operon protein 2 [Listeria ivanovii FSL F6-596]
 gi|313628400|gb|EFR96884.1| ComE operon protein 2 [Listeria ivanovii FSL F6-596]
          Length = 186

 Score = 72.6 bits (178), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 25/91 (27%), Positives = 39/91 (42%), Gaps = 17/91 (18%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKD---------------VTAHAEILAIRMGCRILSQEI 70
           VGA  V + +II+   N +    D                T HAE+ AI    +  +   
Sbjct: 28  VGATIVRDKRIIAGGYNGSIAGGDHCAEHGCYVVDGHCIRTIHAEMNAILQCAKFGATTD 87

Query: 71  LPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
             + +LYVT  PC  C  +I  A I+++Y+ 
Sbjct: 88  --QAELYVTHFPCLACTKSIIQAGIKKVYFA 116


>gi|289807927|ref|ZP_06538556.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp.
           enterica serovar Typhi str. AG3]
          Length = 48

 Score = 72.6 bits (178), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 19/48 (39%), Positives = 25/48 (52%)

Query: 74  VDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
             LYVTLEPC MCA A+  +RI R+ +GA + K G   +         
Sbjct: 1   TTLYVTLEPCVMCAGAMVHSRIGRVVFGARDAKTGAAGSLIDVLHHPG 48


>gi|326506166|dbj|BAJ86401.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 270

 Score = 72.6 bits (178), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 17/58 (29%), Positives = 31/58 (53%)

Query: 72  PEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIY 129
              D+Y+  EPCTMCA A+   R +R++Y   NP  G + +  + +   + +H   ++
Sbjct: 187 TGFDIYLVWEPCTMCAMALVHQRFKRVFYAFPNPVTGALGSVYRLHGKKSLNHHYSVF 244


>gi|110633489|ref|YP_673697.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase /
           diaminohydroxyphosphoribosylaminopyrimidine deaminase
           [Mesorhizobium sp. BNC1]
 gi|110284473|gb|ABG62532.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Chelativorans
           sp. BNC1]
          Length = 370

 Score = 72.6 bits (178), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 33/140 (23%), Positives = 49/140 (35%), Gaps = 25/140 (17%)

Query: 4   GNVFMSCALEEAQNAA-LRNEIP-VGAVAVLNNK----IISRAGNRNRELKDVTAHAEIL 57
              FM+ A+  ++    L    P VG + V ++     I+ RA            HAE  
Sbjct: 10  DRRFMAAAVRLSRRHLGLTGANPSVGCLIVRDDGEGPYIVGRA----VTAIGGRPHAESQ 65

Query: 58  AIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIE 111
           A+     +           YVTLEPC        C+ A+  A + R+   AS+P      
Sbjct: 66  ALEEAGELA-----RGATAYVTLEPCAHHGRTPPCSLALIAAGVARVVGAASDPDLRVSG 120

Query: 112 NGTQFYTLATCHHSPEIYPG 131
            G      A      E+  G
Sbjct: 121 KGYSMLRAAG----IEVVEG 136


>gi|16803523|ref|NP_465008.1| hypothetical protein lmo1483 [Listeria monocytogenes EGD-e]
 gi|47095436|ref|ZP_00233046.1| comE operon protein 2 [Listeria monocytogenes str. 1/2a F6854]
 gi|254827771|ref|ZP_05232458.1| comEB [Listeria monocytogenes FSL N3-165]
 gi|254829758|ref|ZP_05234413.1| hypothetical protein Lmon1_00315 [Listeria monocytogenes 10403S]
 gi|254898351|ref|ZP_05258275.1| hypothetical protein LmonJ_01010 [Listeria monocytogenes J0161]
 gi|254912157|ref|ZP_05262169.1| comE operon protein 2 [Listeria monocytogenes J2818]
 gi|254936485|ref|ZP_05268182.1| comEB [Listeria monocytogenes F6900]
 gi|290893844|ref|ZP_06556822.1| comEB [Listeria monocytogenes FSL J2-071]
 gi|16410912|emb|CAC99561.1| comEB [Listeria monocytogenes EGD-e]
 gi|47016257|gb|EAL07180.1| comE operon protein 2 [Listeria monocytogenes str. 1/2a F6854]
 gi|258600151|gb|EEW13476.1| comEB [Listeria monocytogenes FSL N3-165]
 gi|258609078|gb|EEW21686.1| comEB [Listeria monocytogenes F6900]
 gi|290556561|gb|EFD90097.1| comEB [Listeria monocytogenes FSL J2-071]
 gi|293590129|gb|EFF98463.1| comE operon protein 2 [Listeria monocytogenes J2818]
          Length = 186

 Score = 72.6 bits (178), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 25/91 (27%), Positives = 39/91 (42%), Gaps = 17/91 (18%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKD---------------VTAHAEILAIRMGCRILSQEI 70
           VGA  V + +II+   N +    D                T HAE+ AI    +  +   
Sbjct: 28  VGATIVRDKRIIAGGYNGSIAGGDHCAEHGCYVVDGHCIRTIHAEMNAILQCAKFGATTD 87

Query: 71  LPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
             + +LYVT  PC  C  +I  A I+++Y+ 
Sbjct: 88  --KAELYVTHFPCLACTKSIIQAGIKKVYFA 116


>gi|170750355|ref|YP_001756615.1| riboflavin biosynthesis protein RibD [Methylobacterium
           radiotolerans JCM 2831]
 gi|170656877|gb|ACB25932.1| riboflavin biosynthesis protein RibD [Methylobacterium
           radiotolerans JCM 2831]
          Length = 369

 Score = 72.6 bits (178), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 33/149 (22%), Positives = 45/149 (30%), Gaps = 23/149 (15%)

Query: 1   MKKGNVFMSCALEEAQNAA-LRNEIP-VGAVAVLNN--KIISRAGNRNRELKDVTAHAEI 56
           M     FM  AL   +         P VGAV V     +I+  A       +    H E 
Sbjct: 1   MSGDANFMRLALALGRRGLGTTWPNPSVGAVVVEPGTGRILGTAA----TAQGGRPHGEP 56

Query: 57  LAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGI 110
           +         + E      LYVTLEPC        C  AI  A I R+     +P     
Sbjct: 57  V-----ALAAAGEAARGATLYVTLEPCSHHGRTPPCTDAILAAGIARVVSALEDPDPRVA 111

Query: 111 ENGTQFYTLATCHHSPEIYPGISEQRSRQ 139
             G              +  G+    + +
Sbjct: 112 GRGHDLLRRGG----VAVETGLMRDEAAR 136


>gi|329957030|ref|ZP_08297598.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Bacteroides clarus YIT 12056]
 gi|328523787|gb|EGF50879.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Bacteroides clarus YIT 12056]
          Length = 145

 Score = 72.6 bits (178), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 28/87 (32%), Positives = 36/87 (41%), Gaps = 14/87 (16%)

Query: 26  VGAVAVLNNKIISRAGNRN--------RELKDVT----AHAEILAIRMGCRILSQEILPE 73
           VGA+ V +  IIS   N           +  +VT     HAE  AI    R  +      
Sbjct: 34  VGALIVKDKMIISDGYNGTPSGFENVCEDENNVTKPYVLHAEANAITKIARSNNSSN--G 91

Query: 74  VDLYVTLEPCTMCAAAISLARIRRLYY 100
             +YVT  PC  CA  I  A I+R+ Y
Sbjct: 92  ATMYVTASPCIECAKLIIQAGIKRVVY 118


>gi|303237263|ref|ZP_07323833.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Prevotella disiens FB035-09AN]
 gi|302482650|gb|EFL45675.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Prevotella disiens FB035-09AN]
          Length = 148

 Score = 72.6 bits (178), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 28/88 (31%), Positives = 34/88 (38%), Gaps = 14/88 (15%)

Query: 26  VGAVAVLNNKIISRAGNRNR-------ELKDVTA-----HAEILAIRMGCRILSQEILPE 73
           VGA+ V +  IIS   N          E  D        HAE  AI    R  +      
Sbjct: 31  VGALVVKDKMIISDGYNGTPSGFENICEDNDGLTKPYVLHAEANAITKLARSGNNS--EG 88

Query: 74  VDLYVTLEPCTMCAAAISLARIRRLYYG 101
             LYVT  PC  CA  I  + I+R+ Y 
Sbjct: 89  STLYVTASPCIECAKLIIQSGIKRVVYA 116


>gi|147921095|ref|YP_685094.1| dCMP deaminase [uncultured methanogenic archaeon RC-I]
 gi|110620490|emb|CAJ35768.1| dCMP deaminase [uncultured methanogenic archaeon RC-I]
          Length = 167

 Score = 72.6 bits (178), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 34/152 (22%), Positives = 48/152 (31%), Gaps = 36/152 (23%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGN------------------- 42
            K   FM  A   ++ +       VGAV V N +IIS   N                   
Sbjct: 5   SKDEYFMEIAQVVSKRSTCLRLH-VGAVIVKNGQIISTGYNGAPHGFDHCLDIGCIRENQ 63

Query: 43  -----RNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRR 97
                   EL     HAE  AI       +   +    +Y T +PC +C   I   +I+R
Sbjct: 64  NIAHGTRHELCRAV-HAEQNAIIQAAIHGAS--IEGAAVYCTHQPCILCTKMIINGKIKR 120

Query: 98  LYYGASNPKGGGIENGTQFYTLATCHHSPEIY 129
           + Y    P      +   F   A      E+ 
Sbjct: 121 VVYLNEYPDT----SSLDFLKQAG----VEVV 144


>gi|318057036|ref|ZP_07975759.1| putative riboflavin/cytosine deaminase [Streptomyces sp. SA3_actG]
          Length = 364

 Score = 72.6 bits (178), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 28/141 (19%), Positives = 49/141 (34%), Gaps = 25/141 (17%)

Query: 9   SCALEEAQNAALR---NEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
             A+  A     R   N + VG V +  + ++     ++         HAEI A+R    
Sbjct: 11  REAIALAARGLGRTRPNPV-VGCVVLDASGEVAGSGWHQRAGG----PHAEIHALRAAG- 64

Query: 65  ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
               E        VTLEPC        C+ A+  A +RR+ +  ++P             
Sbjct: 65  ----ERARGGTALVTLEPCDHTGRTGPCSRALIEAGVRRVVHAVADPTDQATGGADTLRA 120

Query: 119 LATCHHSPEIYPGISEQRSRQ 139
                   ++  G+ E+ +  
Sbjct: 121 A-----GVDVEHGLLEREAAD 136


>gi|307083978|ref|ZP_07493091.1| putative cytidine and deoxycytidylate deaminase zinc-binding region
           [Mycobacterium tuberculosis SUMu012]
 gi|308366380|gb|EFP55231.1| putative cytidine and deoxycytidylate deaminase zinc-binding region
           [Mycobacterium tuberculosis SUMu012]
          Length = 132

 Score = 72.6 bits (178), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 29/115 (25%), Positives = 46/115 (40%), Gaps = 21/115 (18%)

Query: 25  PVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83
           PVGAV V  N +I+   G           HAE++A+R    +          + VT+EPC
Sbjct: 32  PVGAVIVDPNGRIVGAGGTEPAGGD----HAEVVALRRAGGLA-----AGAIVVVTMEPC 82

Query: 84  ------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGI 132
                   C  A+  AR+  + Y  ++P  G    G    + A      ++  G+
Sbjct: 83  NHYGRTPPCVNALIEARVGTVVYAVADPN-GIAGGGAGRLSAAGL----QVRSGV 132


>gi|307571064|emb|CAR84243.1| comEB [Listeria monocytogenes L99]
          Length = 176

 Score = 72.6 bits (178), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 25/91 (27%), Positives = 39/91 (42%), Gaps = 17/91 (18%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKD---------------VTAHAEILAIRMGCRILSQEI 70
           VGA  V + +II+   N +    D                T HAE+ AI    +  +   
Sbjct: 18  VGATIVRDKRIIAGGYNGSIAGGDHCAEHGCYVVDGHCIRTIHAEMNAILQCAKFGATTD 77

Query: 71  LPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
             + +LYVT  PC  C  +I  A I+++Y+ 
Sbjct: 78  --KAELYVTHFPCLACTKSIIQAGIKKVYFA 106


>gi|256824048|ref|YP_003148008.1| riboflavin biosynthesis protein RibD [Kytococcus sedentarius DSM
           20547]
 gi|256687441|gb|ACV05243.1| riboflavin biosynthesis protein RibD [Kytococcus sedentarius DSM
           20547]
          Length = 461

 Score = 72.6 bits (178), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 34/192 (17%), Positives = 53/192 (27%), Gaps = 64/192 (33%)

Query: 8   MSCALEEAQNAALRNEIP-VGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCR- 64
           M  AL+ A      +  P VG V +  + + +    ++       T HAE+ A+      
Sbjct: 22  MRRALDLAARGPAVDPNPRVGCVLLDRDGRTLGEGFHQ----GAGTPHAEVAALLDAGCG 77

Query: 65  ---------------------------------------------ILSQEILP-EVDLYV 78
                                                              LP      V
Sbjct: 78  PAAGPRPSGPVTHAGPRPSGPVTHAGPRPSGPVTHAGPRPSGPVTRAGTPRLPAGATAVV 137

Query: 79  TLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGI 132
           TLEPC        CA A+  A I R+    S+P         +  T        E+  G+
Sbjct: 138 TLEPCNHTGRTGPCAEALLDAEIARVVIAQSDPTPLASGGAERLRTA-----GVEVVTGV 192

Query: 133 SEQRSRQIIQDF 144
            E  +  + + F
Sbjct: 193 LESEATALNRWF 204


>gi|241949383|ref|XP_002417414.1| tRNA-specific adenosine deaminase 3, putative; tRNA-specific
           adenosine-34 deaminase subunit, putative [Candida
           dubliniensis CD36]
 gi|223640752|emb|CAX45066.1| tRNA-specific adenosine deaminase 3, putative [Candida dubliniensis
           CD36]
          Length = 327

 Score = 72.6 bits (178), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 25/100 (25%), Positives = 41/100 (41%), Gaps = 12/100 (12%)

Query: 47  LKDVTAHAEILAI----------RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIR 96
             +   H+ + AI          R   +     +  ++ +Y T EPC MCA A+  +RI 
Sbjct: 211 NHNPQEHSVMQAISKIAEKEVMNRKSNQNERGYLCNDMIVYTTHEPCVMCAMALVHSRIG 270

Query: 97  RLYYGASNPKGGGIENGTQFYTLATCHHSPEIYP--GISE 134
           R+ Y       GG+E+  Q       +   EI+   G+ E
Sbjct: 271 RIIYLKPEKSSGGLESHYQLGDRDGLNWKFEIWRWLGVDE 310


>gi|108759248|ref|YP_632223.1| cytidine and deoxycytidylate deaminase zinc-binding
           domain-containing protein [Myxococcus xanthus DK 1622]
 gi|108463128|gb|ABF88313.1| cytidine and deoxycytidylate deaminase zinc-binding domain protein
           [Myxococcus xanthus DK 1622]
          Length = 150

 Score = 72.6 bits (178), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 29/120 (24%), Positives = 41/120 (34%), Gaps = 20/120 (16%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGN---------------RNRELK 48
              FM  A + A  A    +  VGAV V    I+S   N                     
Sbjct: 8   DQYFMDIATQVASRATCDRKH-VGAVIVRGRTILSTGYNGAIRGLPHCDDVGHMMENGHC 66

Query: 49  DVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG--ASNPK 106
             T HAE  AI       +   +    +Y T  PC  C   I+ A + R+ +G    +P+
Sbjct: 67  VATVHAEANAIIQAA--TNGVSIDGATIYTTASPCWPCFKLIANAGLVRIVFGEFYRDPR 124


>gi|57651981|ref|YP_186485.1| comE operon protein 2 [Staphylococcus aureus subsp. aureus COL]
 gi|87160601|ref|YP_494243.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus
           USA300_FPR3757]
 gi|88195398|ref|YP_500202.1| hypothetical protein SAOUHSC_01692 [Staphylococcus aureus subsp.
           aureus NCTC 8325]
 gi|148268072|ref|YP_001247015.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus JH9]
 gi|150394141|ref|YP_001316816.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus JH1]
 gi|221141140|ref|ZP_03565633.1| competence protein ComEB [Staphylococcus aureus subsp. aureus str.
           JKD6009]
 gi|253315374|ref|ZP_04838587.1| competence protein ComEB [Staphylococcus aureus subsp. aureus str.
           CF-Marseille]
 gi|269203216|ref|YP_003282485.1| comE operon protein 2 [Staphylococcus aureus subsp. aureus ED98]
 gi|284024647|ref|ZP_06379045.1| competence protein ComEB [Staphylococcus aureus subsp. aureus 132]
 gi|57286167|gb|AAW38261.1| comE operon protein 2 [Staphylococcus aureus subsp. aureus COL]
 gi|87126575|gb|ABD21089.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus
           USA300_FPR3757]
 gi|87202956|gb|ABD30766.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           NCTC 8325]
 gi|147741141|gb|ABQ49439.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus JH9]
 gi|149946593|gb|ABR52529.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus JH1]
 gi|262075506|gb|ACY11479.1| comE operon protein 2 [Staphylococcus aureus subsp. aureus ED98]
 gi|302333265|gb|ADL23458.1| deoxycytidylate deaminase ComEB [Staphylococcus aureus subsp.
           aureus JKD6159]
 gi|315129867|gb|EFT85857.1| possible competence protein ComEB [Staphylococcus aureus subsp.
           aureus CGS03]
 gi|315198714|gb|EFU29042.1| possible competence protein ComEB [Staphylococcus aureus subsp.
           aureus CGS01]
          Length = 143

 Score = 72.6 bits (178), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 25/91 (27%), Positives = 36/91 (39%), Gaps = 17/91 (18%)

Query: 26  VGAVAVLNNKIISRAGNRNRE---------------LKDVTAHAEILAIRMGCRILSQEI 70
           VGA  V +N+II+   N +                     T HAE+ A+    +      
Sbjct: 18  VGATIVKDNRIIAGGYNGSVAGEVHCIDEGCLIEDGHCIRTIHAEMNALLQCAKQGVST- 76

Query: 71  LPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
                +YVT  PC  C  +I  A I+R+YY 
Sbjct: 77  -EGATIYVTHFPCLNCTKSIIQAGIKRIYYA 106


>gi|297617055|ref|YP_003702214.1| riboflavin biosynthesis protein RibD [Syntrophothermus lipocalidus
           DSM 12680]
 gi|297144892|gb|ADI01649.1| riboflavin biosynthesis protein RibD [Syntrophothermus lipocalidus
           DSM 12680]
          Length = 364

 Score = 72.6 bits (178), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 36/123 (29%), Positives = 49/123 (39%), Gaps = 19/123 (15%)

Query: 1   MKKGNVFMSCALEEAQNAALR---NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57
           M     +M  A+E A  A  R   N + VGAV VL  +++    ++       T HAEI 
Sbjct: 1   MSIDEKYMGRAVELAVQALGRTSPNPV-VGAVVVLEGEVVGEGYHQ----LAGTPHAEIH 55

Query: 58  AIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIE 111
           A+         E      LYVTLEPC        C  AI  + I+R+     +P      
Sbjct: 56  ALNQAG-----ERARGATLYVTLEPCCHYGKTPPCVDAIIGSGIKRVVVAIQDPNPQVSG 110

Query: 112 NGT 114
            G 
Sbjct: 111 QGI 113


>gi|332800033|ref|YP_004461532.1| CMP/dCMP deaminase zinc-binding protein [Tepidanaerobacter sp. Re1]
 gi|332697768|gb|AEE92225.1| CMP/dCMP deaminase zinc-binding protein [Tepidanaerobacter sp. Re1]
          Length = 138

 Score = 72.6 bits (178), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 31/121 (25%), Positives = 46/121 (38%), Gaps = 28/121 (23%)

Query: 1   MKKG--NVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKD------ 49
           M+K     F+  A +  + +      P   VGAV V +N+I     N +    D      
Sbjct: 1   MRKDWDKYFLEIAFKVRERSTC----PRLQVGAVVVKDNRIKGTGYNGSPSGMDHCDDVG 56

Query: 50  ---------VTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
                     T HAE+ A+       S E      +YVT  PC  C+  I  + I+R+ Y
Sbjct: 57  CMIRGNHCVRTIHAEVNALLE----CSPEERKGATIYVTARPCAECSKLIINSGIKRVVY 112

Query: 101 G 101
            
Sbjct: 113 A 113


>gi|288555665|ref|YP_003427600.1| DNA binding and uptake late competence protein [Bacillus
           pseudofirmus OF4]
 gi|288546825|gb|ADC50708.1| late competence operon required for DNA binding and uptake
           [Bacillus pseudofirmus OF4]
          Length = 189

 Score = 72.6 bits (178), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 31/122 (25%), Positives = 49/122 (40%), Gaps = 19/122 (15%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKD----------- 49
           +     FM+ +   A  +A    + VGA  V   +II+   N +    D           
Sbjct: 4   ISWDQYFMAQSHLLALRSACTR-LMVGATIVREKRIIAGGYNGSVSGSDHCIDQGCYVVD 62

Query: 50  ----VTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNP 105
                T HAE+ A+    +          +LYVT  PC  C  +I  A I++++Y AS+ 
Sbjct: 63  HHCIRTIHAEVNALLQCAKFGVPT--EGAELYVTHFPCVHCTKSIIQAGIKKVFY-ASDY 119

Query: 106 KG 107
           K 
Sbjct: 120 KN 121


>gi|157415842|ref|YP_001483098.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Campylobacter jejuni subsp. jejuni 81116]
 gi|157386806|gb|ABV53121.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Campylobacter jejuni subsp. jejuni 81116]
 gi|307748478|gb|ADN91748.1| Putative riboflavin specific deaminase [Campylobacter jejuni subsp.
           jejuni M1]
 gi|315931666|gb|EFV10627.1| riboflavin biosynthesis protein RibD [Campylobacter jejuni subsp.
           jejuni 327]
          Length = 336

 Score = 72.6 bits (178), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 41/177 (23%), Positives = 64/177 (36%), Gaps = 44/177 (24%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAV-LNNKIIS-RAGNRNRELKDVTAHAE 55
           MK    +M+ AL EA         P   VG V +  N KI++ +A       K   AHAE
Sbjct: 11  MK--EFYMNLALNEAWK-YQFLTYPNPAVGCVILDKNGKILAIKAH-----EKAGLAHAE 62

Query: 56  ILAIRMGCRILSQEI--------------------LPEVDLYVTLEPC------TMCAAA 89
           + AI    + L  EI                      +   +VTLEPC        CA  
Sbjct: 63  LNAIAHAFKSLRPEISLPKEANALHEFICKNHQGVFKDSIAFVTLEPCSHQGKTPPCAKL 122

Query: 90  ISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
            S    ++++    +        G +F          EI   I ++  +++++ F K
Sbjct: 123 FSELGFKKIFISVKDENKIASG-GAEFLKKQG----IEIEFDILKEEGKKLLKPFLK 174


>gi|288906089|ref|YP_003431311.1| competence protein ComEB required for DNA binding and uptake
           [Streptococcus gallolyticus UCN34]
 gi|306832128|ref|ZP_07465282.1| competence protein ComEB [Streptococcus gallolyticus subsp.
           gallolyticus TX20005]
 gi|325979054|ref|YP_004288770.1| competence protein ComEB [Streptococcus gallolyticus subsp.
           gallolyticus ATCC BAA-2069]
 gi|288732815|emb|CBI14391.1| putative competence protein ComEB required for DNA binding and
           uptake [Streptococcus gallolyticus UCN34]
 gi|304425567|gb|EFM28685.1| competence protein ComEB [Streptococcus gallolyticus subsp.
           gallolyticus TX20005]
 gi|325178982|emb|CBZ49026.1| competence protein ComEB [Streptococcus gallolyticus subsp.
           gallolyticus ATCC BAA-2069]
          Length = 154

 Score = 72.6 bits (178), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 34/127 (26%), Positives = 48/127 (37%), Gaps = 18/127 (14%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKD---------------VTAHAEILAIRMGCRILSQEI 70
           VGAV V +N+II+   N      D                T HAE+ A+    +      
Sbjct: 29  VGAVLVKDNRIIATGYNGGVSETDNCNEVGHKMEDGHCIRTVHAEMNALIQCAKEGIST- 87

Query: 71  LPEVDLYVTLEPCTMCAAAISLARIRRLYY-GASNPKGGGIENGTQFYTLATCHHSPEIY 129
               ++YVT  PC  C  A+  A I+++ Y  A       IE   Q       H  PE+ 
Sbjct: 88  -KGTEIYVTHFPCINCTKALLQAGIKKITYKTAYRMHPFAIELMEQKGVEYVQHDVPEVK 146

Query: 130 PGISEQR 136
            G+ E  
Sbjct: 147 LGMDESE 153


>gi|238878760|gb|EEQ42398.1| conserved hypothetical protein [Candida albicans WO-1]
          Length = 275

 Score = 72.6 bits (178), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 25/100 (25%), Positives = 40/100 (40%), Gaps = 12/100 (12%)

Query: 47  LKDVTAHAEILAI----------RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIR 96
             D   H+ + AI          R   +     +  ++ +Y T EPC MC  A+  +RI 
Sbjct: 159 NNDPQGHSVMEAISKIAEREVMNRKSNQSERGYLCNDMLVYTTHEPCVMCCMALVHSRIG 218

Query: 97  RLYYGASNPKGGGIENGTQFYTLATCHHSPEIYP--GISE 134
           R+ Y       GG+E+  Q       +   EI+   G+ E
Sbjct: 219 RIIYLKPEKSSGGLESHYQLGDRDGLNWKFEIWRWLGVDE 258


>gi|260945269|ref|XP_002616932.1| hypothetical protein CLUG_02376 [Clavispora lusitaniae ATCC 42720]
 gi|238848786|gb|EEQ38250.1| hypothetical protein CLUG_02376 [Clavispora lusitaniae ATCC 42720]
          Length = 590

 Score = 72.6 bits (178), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 31/111 (27%), Positives = 45/111 (40%), Gaps = 12/111 (10%)

Query: 6   VFMSCALEEAQN-AALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
            FM  ALE A+     + +  VGAV VL+ +++S   +R         HAE  A+     
Sbjct: 443 KFMELALENARKCGETQTQFNVGAVLVLDGQVLSTGHSRELPGN---THAEQCALEKYFE 499

Query: 65  ILSQEILP-EVDLYVTLEPC-------TMCAAAISLARIRRLYYGASNPKG 107
              Q  +P   ++Y T+EPC         C   I    I+  Y G   P  
Sbjct: 500 KTGQRNVPEGTEIYTTMEPCSLRLSGNLPCVDRIIATNIKTCYVGVVEPDT 550


>gi|68476669|ref|XP_717627.1| potential tRNA wobble position adenosine deaminase subunit [Candida
           albicans SC5314]
 gi|68476816|ref|XP_717553.1| potential tRNA wobble position adenosine deaminase subunit [Candida
           albicans SC5314]
 gi|46439268|gb|EAK98588.1| potential tRNA wobble position adenosine deaminase subunit [Candida
           albicans SC5314]
 gi|46439345|gb|EAK98664.1| potential tRNA wobble position adenosine deaminase subunit [Candida
           albicans SC5314]
          Length = 326

 Score = 72.6 bits (178), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 25/100 (25%), Positives = 40/100 (40%), Gaps = 12/100 (12%)

Query: 47  LKDVTAHAEILAI----------RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIR 96
             D   H+ + AI          R   +     +  ++ +Y T EPC MC  A+  +RI 
Sbjct: 210 NNDPQGHSVMEAISKIAEREVMNRKSNQSERGYLCNDMLVYTTHEPCVMCCMALVHSRIG 269

Query: 97  RLYYGASNPKGGGIENGTQFYTLATCHHSPEIYP--GISE 134
           R+ Y       GG+E+  Q       +   EI+   G+ E
Sbjct: 270 RIIYLKPEKSSGGLESHYQLGDRDGLNWKFEIWRWLGVDE 309


>gi|255027259|ref|ZP_05299245.1| hypothetical protein LmonocytFSL_14643 [Listeria monocytogenes FSL
           J2-003]
          Length = 183

 Score = 72.6 bits (178), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 25/91 (27%), Positives = 39/91 (42%), Gaps = 17/91 (18%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKD---------------VTAHAEILAIRMGCRILSQEI 70
           VGA  V + +II+   N +    D                T HAE+ AI    +  +   
Sbjct: 28  VGATIVRDKRIIAGGYNGSIAGGDHCAEHGCYVVDGHCIRTIHAEMNAILQCAKFGATTD 87

Query: 71  LPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
             + +LYVT  PC  C  +I  A I+++Y+ 
Sbjct: 88  --KAELYVTHFPCLACTKSIIQAGIKKVYFA 116


>gi|73662478|ref|YP_301259.1| dCMP deaminase [Staphylococcus saprophyticus subsp. saprophyticus
           ATCC 15305]
 gi|72494993|dbj|BAE18314.1| putative dCMP deaminase [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
          Length = 153

 Score = 72.6 bits (178), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 27/116 (23%), Positives = 43/116 (37%), Gaps = 18/116 (15%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRE-------------- 46
           +K    FM+ +   A  +     + VGA  V +N+II+   N +                
Sbjct: 4   IKWEEYFMAQSHLLALRSTCER-LSVGATIVKDNRIIAGGYNGSVSGEVHCIDEGCLLED 62

Query: 47  -LKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
                T HAE+ A+    +           +YVT  PC  C  +I  + I  +YY 
Sbjct: 63  GHCIRTIHAEMNALLQCAKQGVSTD--GATIYVTHFPCLNCTKSIIQSGIDTIYYA 116


>gi|46907711|ref|YP_014100.1| zinc-binding protein ComEB [Listeria monocytogenes serotype 4b str.
           F2365]
 gi|226224084|ref|YP_002758191.1| ComEB protein [Listeria monocytogenes Clip81459]
 gi|254824458|ref|ZP_05229459.1| zinc-binding ComEB family protein [Listeria monocytogenes FSL
           J1-194]
 gi|254852107|ref|ZP_05241455.1| zinc-binding ComEB family protein [Listeria monocytogenes FSL
           R2-503]
 gi|254931418|ref|ZP_05264777.1| zinc-binding ComEB family protein [Listeria monocytogenes HPB2262]
 gi|254992215|ref|ZP_05274405.1| ComEB protein [Listeria monocytogenes FSL J2-064]
 gi|255520859|ref|ZP_05388096.1| ComEB protein [Listeria monocytogenes FSL J1-175]
 gi|300764852|ref|ZP_07074842.1| hypothetical protein LMHG_12881 [Listeria monocytogenes FSL N1-017]
 gi|46880980|gb|AAT04277.1| zinc-binding, ComEB family protein [Listeria monocytogenes serotype
           4b str. F2365]
 gi|225876546|emb|CAS05255.1| Putative ComEB protein [Listeria monocytogenes serotype 4b str.
           CLIP 80459]
 gi|258605409|gb|EEW18017.1| zinc-binding ComEB family protein [Listeria monocytogenes FSL
           R2-503]
 gi|293582968|gb|EFF95000.1| zinc-binding ComEB family protein [Listeria monocytogenes HPB2262]
 gi|293593695|gb|EFG01456.1| zinc-binding ComEB family protein [Listeria monocytogenes FSL
           J1-194]
 gi|300514528|gb|EFK41585.1| hypothetical protein LMHG_12881 [Listeria monocytogenes FSL N1-017]
 gi|328465524|gb|EGF36753.1| ComEB protein [Listeria monocytogenes 1816]
 gi|328474941|gb|EGF45737.1| ComEB protein [Listeria monocytogenes 220]
 gi|332311925|gb|EGJ25020.1| ComE operon protein [Listeria monocytogenes str. Scott A]
          Length = 186

 Score = 72.6 bits (178), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 25/91 (27%), Positives = 39/91 (42%), Gaps = 17/91 (18%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKD---------------VTAHAEILAIRMGCRILSQEI 70
           VGA  V + +II+   N +    D                T HAE+ AI    +  +   
Sbjct: 28  VGATIVRDKRIIAGGYNGSIAGGDHCAEHGCYVVDGHCIRTIHAEMNAILQCAKFGATTD 87

Query: 71  LPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
             + +LYVT  PC  C  +I  A I+++Y+ 
Sbjct: 88  --KAELYVTHFPCLACTKSIIQAGIKKVYFA 116


>gi|326507252|dbj|BAJ95703.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 249

 Score = 72.6 bits (178), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 17/58 (29%), Positives = 31/58 (53%)

Query: 72  PEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIY 129
              D+Y+  EPCTMCA A+   R +R++Y   NP  G + +  + +   + +H   ++
Sbjct: 166 TGFDIYLVWEPCTMCAMALVHQRFKRVFYAFPNPVTGALGSVYRLHGKKSLNHHYSVF 223


>gi|284036841|ref|YP_003386771.1| CMP/dCMP deaminase zinc-binding protein [Spirosoma linguale DSM 74]
 gi|283816134|gb|ADB37972.1| CMP/dCMP deaminase zinc-binding protein [Spirosoma linguale DSM 74]
          Length = 186

 Score = 72.3 bits (177), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 33/164 (20%), Positives = 54/164 (32%), Gaps = 51/164 (31%)

Query: 4   GNVFMSCALEEAQNAA---LRNEIPVGAVAVLNNKIISRAGN------------------ 42
            ++FM  A+  A+ +     +    VGAV   + +IIS   N                  
Sbjct: 25  DDIFMDLAVNLAKRSHCIKAQ----VGAVLTRDTRIISIGYNGPPAGTHNCDEEFPGVGC 80

Query: 43  --RNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
              ++    +  HAE  AI    +  +   +    +YVTL PC  CA  I   +I R+ +
Sbjct: 81  PRDSKGSCSLALHAEQNAILYAAK--NGSEIEGSTIYVTLSPCIACARIIYSMKIARVVF 138

Query: 101 GASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
                                 +   E Y GI        ++ F
Sbjct: 139 ---------------------LNSYAE-YKGIPSDEGVDFLRRF 160


>gi|170076474|ref|YP_001733112.1| hypothetical protein SYNPCC7002_G0004 [Synechococcus sp. PCC 7002]
 gi|169887336|gb|ACB01044.1| Conserved hypothetical protein, with zinc-binding domain
           [Synechococcus sp. PCC 7002]
          Length = 191

 Score = 72.3 bits (177), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 27/113 (23%), Positives = 46/113 (40%), Gaps = 8/113 (7%)

Query: 8   MSCALEEAQNAA-LRNEIPVGAVA--VLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           M   +E A+     +   P GA    +   ++I+   N          HAE++AI +   
Sbjct: 33  MRFVVEAARENIIQKTGGPFGAGIFNIETGELIALGVNLVTSENLFFLHAEMVAIAIAQH 92

Query: 65  ILSQEIL-----PEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN 112
             +Q+ L     P ++L  + EPC MC   I  + ++R+  GA       I  
Sbjct: 93  KFNQDNLSTANLPALELIASTEPCGMCLGGIHWSNLKRVVSGARGADAEAIGF 145


>gi|167765189|ref|ZP_02437302.1| hypothetical protein BACSTE_03575 [Bacteroides stercoris ATCC
           43183]
 gi|167696817|gb|EDS13396.1| hypothetical protein BACSTE_03575 [Bacteroides stercoris ATCC
           43183]
          Length = 145

 Score = 72.3 bits (177), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 27/87 (31%), Positives = 36/87 (41%), Gaps = 14/87 (16%)

Query: 26  VGAVAVLNNKIISRAGNRN--------RELKDVT----AHAEILAIRMGCRILSQEILPE 73
           VGA+ V +  IIS   N           +  ++T     HAE  AI    R  +      
Sbjct: 34  VGALIVKDKMIISDGYNGTPSGFENVCEDENNLTKPYVLHAEANAITKIARSNNSSN--G 91

Query: 74  VDLYVTLEPCTMCAAAISLARIRRLYY 100
             +YVT  PC  CA  I  A I+R+ Y
Sbjct: 92  ATMYVTASPCIECAKLIIQAGIKRVVY 118


>gi|319651626|ref|ZP_08005753.1| ComEB protein [Bacillus sp. 2_A_57_CT2]
 gi|317396693|gb|EFV77404.1| ComEB protein [Bacillus sp. 2_A_57_CT2]
          Length = 187

 Score = 72.3 bits (177), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 28/116 (24%), Positives = 45/116 (38%), Gaps = 18/116 (15%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKD----------- 49
           +     FM+ +   A  +     + VGA  V + +II+   N +    +           
Sbjct: 4   ISWNQYFMAQSHLLALRSTCTR-LAVGATIVRDKRIIAGGYNGSIAGGEHCIDEGCYVID 62

Query: 50  ----VTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
                T HAE+ AI    +        + ++YVT  PC  C  AI  A I+ +YY 
Sbjct: 63  NHCVRTIHAEMNAILQCAKFGVPT--TDAEIYVTHFPCLQCCKAIIQAGIKTVYYA 116


>gi|19551876|ref|NP_599878.1| cytosine/adenosine deaminase [Corynebacterium glutamicum ATCC
           13032]
 gi|62389535|ref|YP_224937.1| cytidine and deoxycytidylate deaminase [Corynebacterium glutamicum
           ATCC 13032]
 gi|21323410|dbj|BAB98038.1| Cytosine/adenosine deaminases [Corynebacterium glutamicum ATCC
           13032]
 gi|41324869|emb|CAF19351.1| Cytidine and deoxycytidylate deaminase [Corynebacterium glutamicum
           ATCC 13032]
          Length = 164

 Score = 72.3 bits (177), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 27/139 (19%), Positives = 47/139 (33%), Gaps = 10/139 (7%)

Query: 1   MKKGNV-FMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILA 58
           M + ++  +   +E A  A  +   P G++ V     ++    NR     D+T H E   
Sbjct: 1   MTEDDLDLLHRTVELATQALKQGNSPYGSLLVDPFGAVVFEDHNR-DADGDLTKHPEFAI 59

Query: 59  IRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY-------GASNPKGGGIE 111
            +      S        +Y + E C MCA A + A + ++Y         A   K G   
Sbjct: 60  AKYAIENYSASERAACTVYTSTEHCAMCAGAHAWAGLGKIYCATTGGQTAAWYAKWGAES 119

Query: 112 NGTQFYTLATCHHSPEIYP 130
                 +      +  I  
Sbjct: 120 GPLNPISADKISPNISIEG 138


>gi|312129766|ref|YP_003997106.1| cmp/dcmp deaminase zinc-binding protein [Leadbetterella byssophila
           DSM 17132]
 gi|311906312|gb|ADQ16753.1| CMP/dCMP deaminase zinc-binding protein [Leadbetterella byssophila
           DSM 17132]
          Length = 152

 Score = 72.3 bits (177), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 36/146 (24%), Positives = 59/146 (40%), Gaps = 34/146 (23%)

Query: 1   MKK---GNVFMSCALEEAQNA---ALRNEIPVGAVAVLNNKIISRAGN------------ 42
           M K    ++FM  A++ A+ +     +    VGAV V + +IIS   N            
Sbjct: 1   MDKPKFDDIFMDLAIQLAKRSHCVRAQ----VGAVLVNDTRIISIGYNGPPAGTHNCDDE 56

Query: 43  --------RNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLAR 94
                    ++    +  HAE  AI    +  +   +    LYVTL PC  CA  I   +
Sbjct: 57  FGEQGCPRDSKGSCSLALHAEQNAILYATKNGAN--VEGSTLYVTLSPCIACARVIFSMK 114

Query: 95  IRRLYYGASNPKGGGIEN--GTQFYT 118
           I++++Y  S  +  G+ +  G  F  
Sbjct: 115 IKKVFYLNSYAEYKGLSSDEGVDFLR 140


>gi|145294813|ref|YP_001137634.1| hypothetical protein cgR_0760 [Corynebacterium glutamicum R]
 gi|140844733|dbj|BAF53732.1| hypothetical protein [Corynebacterium glutamicum R]
          Length = 164

 Score = 72.3 bits (177), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 27/139 (19%), Positives = 47/139 (33%), Gaps = 10/139 (7%)

Query: 1   MKKGNV-FMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILA 58
           M + ++  +   +E A  A  +   P G++ V     ++    NR     D+T H E   
Sbjct: 1   MTEDDLDLLHRTVELATQALKQGNSPYGSLLVDPFGAVVFEDHNR-DADGDLTKHPEFAI 59

Query: 59  IRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY-------GASNPKGGGIE 111
            +      S        +Y + E C MCA A + A + ++Y         A   K G   
Sbjct: 60  AKYAIENYSASERAACTVYTSTEHCAMCAGAHAWAGLGKIYCATTGEQTAAWYAKWGAES 119

Query: 112 NGTQFYTLATCHHSPEIYP 130
                 +      +  I  
Sbjct: 120 GPLNPISADKISPNISIEG 138


>gi|28572847|ref|NP_789627.1| riboflavin biosynthesis protein RibD [Tropheryma whipplei TW08/27]
 gi|28410980|emb|CAD67365.1| riboflavin biosynthesis protein RibD [Tropheryma whipplei TW08/27]
          Length = 371

 Score = 72.3 bits (177), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 34/137 (24%), Positives = 63/137 (45%), Gaps = 24/137 (17%)

Query: 8   MSCALEEAQNAALRNEIP-VGAVAVLNN-KIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M  A+  AQ+  + +  P VG V +  + ++IS+  +        + HAEI+A+R    I
Sbjct: 16  MHRAITIAQHGPVFDRNPQVGCVILDRDYQLISQGWHM----GSGSEHAEIMALRGAKSI 71

Query: 66  LSQEILPEVDLYVTLEPCT------MCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
           LS+         +TLEPC+       C  A+  A ++ + +G  +P+     +G +  + 
Sbjct: 72  LSEPYAA----VITLEPCSSAGQTGPCVRALLDAGVKHVVFGVHDPE----SSGAKVLSE 123

Query: 120 ATCHHSPEIYPGISEQR 136
           A      +I  G+ E+ 
Sbjct: 124 AG----VKITYGVLERE 136


>gi|18699612|gb|AAL78655.1|AF468456_1 competence protein [Listeria monocytogenes]
          Length = 176

 Score = 72.3 bits (177), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 25/91 (27%), Positives = 39/91 (42%), Gaps = 17/91 (18%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKD---------------VTAHAEILAIRMGCRILSQEI 70
           VGA  V + +II+   N +    D                T HAE+ AI    +  +   
Sbjct: 18  VGATIVRDKRIIAGGYNGSIAGGDHCAEHGCYVVDGHCIRTIHAEMNAILQCAKFGATTD 77

Query: 71  LPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
             + +LYVT  PC  C  +I  A I+++Y+ 
Sbjct: 78  --KAELYVTHFPCLACTKSIIQAGIKKVYFA 106


>gi|16800586|ref|NP_470854.1| hypothetical protein lin1518 [Listeria innocua Clip11262]
 gi|16413991|emb|CAC96749.1| comEB [Listeria innocua Clip11262]
          Length = 186

 Score = 72.3 bits (177), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 25/91 (27%), Positives = 39/91 (42%), Gaps = 17/91 (18%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKD---------------VTAHAEILAIRMGCRILSQEI 70
           VGA  V + +II+   N +    D                T HAE+ AI    +  +   
Sbjct: 28  VGATIVRDKRIIAGGYNGSIAGGDHCAEHGCYVVDGHCIRTIHAEMNAILQCAKFGASTD 87

Query: 71  LPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
             + +LYVT  PC  C  +I  A I+++Y+ 
Sbjct: 88  --KAELYVTHFPCLACTKSIIQAGIKKVYFA 116


>gi|306834244|ref|ZP_07467363.1| competence protein ComEB [Streptococcus bovis ATCC 700338]
 gi|304423593|gb|EFM26740.1| competence protein ComEB [Streptococcus bovis ATCC 700338]
          Length = 155

 Score = 72.3 bits (177), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 34/127 (26%), Positives = 48/127 (37%), Gaps = 18/127 (14%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKD---------------VTAHAEILAIRMGCRILSQEI 70
           VGAV V +N+II+   N      D                T HAE+ A+    +      
Sbjct: 30  VGAVLVKDNRIIATGYNGGVSETDNCNEVGHKMEDGHCIRTVHAEMNALIQCAKEGIST- 88

Query: 71  LPEVDLYVTLEPCTMCAAAISLARIRRLYY-GASNPKGGGIENGTQFYTLATCHHSPEIY 129
               ++YVT  PC  C  A+  A I+++ Y  A       IE   Q       H  PE+ 
Sbjct: 89  -KGTEIYVTHFPCINCTKALLQAGIKKITYKTAYRMHPFAIELMEQKGVEYVQHDVPEVK 147

Query: 130 PGISEQR 136
            G+ E  
Sbjct: 148 LGMDESE 154


>gi|262202280|ref|YP_003273488.1| riboflavin biosynthesis protein RibD [Gordonia bronchialis DSM
           43247]
 gi|262085627|gb|ACY21595.1| riboflavin biosynthesis protein RibD [Gordonia bronchialis DSM
           43247]
          Length = 333

 Score = 72.3 bits (177), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 28/138 (20%), Positives = 41/138 (29%), Gaps = 23/138 (16%)

Query: 8   MSCALEE--AQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           M  A+ E  A         PVGAV V     I+               HAEI+A+     
Sbjct: 7   MRQAITESAAAQGVSTPNPPVGAVIVDRAGTIVGVGH--TAPPGGP--HAEIVALTQAGA 62

Query: 65  ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
                        VTLEPC        C+ A+  A +  + +G ++P             
Sbjct: 63  AARG-----ATAVVTLEPCNHTGRTGPCSQALIAAGVAHVCFGVADPNPTAAGGADTLRA 117

Query: 119 LATCHHSPEIYPGISEQR 136
                    +  G+    
Sbjct: 118 A-----GVSVDAGVLADE 130


>gi|239930347|ref|ZP_04687300.1| riboflavin/cytosine deaminase [Streptomyces ghanaensis ATCC 14672]
 gi|291438692|ref|ZP_06578082.1| bifunctional enzyme deaminase/reductase [Streptomyces ghanaensis
           ATCC 14672]
 gi|291341587|gb|EFE68543.1| bifunctional enzyme deaminase/reductase [Streptomyces ghanaensis
           ATCC 14672]
          Length = 377

 Score = 72.3 bits (177), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 31/123 (25%), Positives = 47/123 (38%), Gaps = 16/123 (13%)

Query: 4   GNVFMSCALEEAQNAALRNE-IPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRM 61
            + +++ A + A+          VGAV V  +   ++R  +R  E  D   HAE  A+  
Sbjct: 231 DHHWLALACDLAERCPPSGTAFSVGAVVVAADGTELARGHSR--EGGDPVVHAEEAAL-- 286

Query: 62  GCRILSQEILPEVDLYVTLEPC-------TMCAAAISLARIRRLYYGASNPKG---GGIE 111
                +   L    +Y +LEPC         CA  I  A IRR+      P     G   
Sbjct: 287 AKTDPTDPRLATATVYSSLEPCARRASRPAPCARLILDAGIRRVVTAWREPDTFVPGADG 346

Query: 112 NGT 114
           +G 
Sbjct: 347 SGV 349


>gi|226226877|ref|YP_002760983.1| diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Gemmatimonas aurantiaca T-27]
 gi|226090068|dbj|BAH38513.1| diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Gemmatimonas aurantiaca T-27]
          Length = 384

 Score = 72.3 bits (177), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 27/157 (17%), Positives = 48/157 (30%), Gaps = 22/157 (14%)

Query: 3   KGNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
               FM  A+  A+  A   ++   P VGAV V + +++    ++               
Sbjct: 24  DDVRFMRRAIALAERGA--GQVAPNPKVGAVLVRDGQVVGEGWHQQYGGPHAEV-----H 76

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
                  ++         YV+LEPC        C  A+  A + R+     +P       
Sbjct: 77  ALAAAHAVAANAARGATAYVSLEPCNHHGKTPPCTEALIAAGVARVVCATRDPNPKAAGG 136

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
             +            +  G+ E  +      FF   R
Sbjct: 137 IERLEAA-----GIRVTVGVCEHEALVQNAPFFHAAR 168


>gi|189462145|ref|ZP_03010930.1| hypothetical protein BACCOP_02827 [Bacteroides coprocola DSM 17136]
 gi|189431118|gb|EDV00103.1| hypothetical protein BACCOP_02827 [Bacteroides coprocola DSM 17136]
          Length = 144

 Score = 72.3 bits (177), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 31/110 (28%), Positives = 42/110 (38%), Gaps = 15/110 (13%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRN--------RELKDVT---- 51
              +M  A   ++N+       VGA+ V N  IIS   N           +   +T    
Sbjct: 12  DKRYMQMATIWSENSYCNRRK-VGALIVKNKMIISDGYNGTPAGFENVCEDEHGITKPYV 70

Query: 52  AHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
            HAE  AI    R  +        LYVT  PC  CA  I  A I+R+ + 
Sbjct: 71  LHAEANAITKIARSNNSS--EGATLYVTASPCIECAKLIIQAGIKRVVFA 118


>gi|313889696|ref|ZP_07823339.1| putative ComE operon protein 2 [Streptococcus pseudoporcinus SPIN
           20026]
 gi|313121993|gb|EFR45089.1| putative ComE operon protein 2 [Streptococcus pseudoporcinus SPIN
           20026]
          Length = 152

 Score = 72.3 bits (177), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 26/90 (28%), Positives = 37/90 (41%), Gaps = 17/90 (18%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKD---------------VTAHAEILAIRMGCRILSQEI 70
           VGAV V +N+II+   N      D                T HAE+ A+    +      
Sbjct: 29  VGAVLVKDNRIIATGYNGGVSATDNCNEAGHYMEDGHCIRTVHAEMNALIQCAKEGISTD 88

Query: 71  LPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
               +LYVT  PC  C  A+  A I+++ Y
Sbjct: 89  --GTELYVTHFPCINCTKALLQAGIKKITY 116


>gi|242075038|ref|XP_002447455.1| hypothetical protein SORBIDRAFT_06g001320 [Sorghum bicolor]
 gi|241938638|gb|EES11783.1| hypothetical protein SORBIDRAFT_06g001320 [Sorghum bicolor]
          Length = 412

 Score = 72.3 bits (177), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 17/58 (29%), Positives = 30/58 (51%)

Query: 72  PEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIY 129
              D+Y+  EPCTMCA A+   R +R++Y   NP  G +    + +   + +H   ++
Sbjct: 336 TGFDIYLVWEPCTMCAMALVHHRFKRVFYAFPNPVTGALGGVYRLHGERSLNHHYNVF 393


>gi|121612362|ref|YP_001001265.1| riboflavin biosynthesis protein RibD [Campylobacter jejuni subsp.
           jejuni 81-176]
 gi|121504161|gb|EAQ72749.2| riboflavin biosynthesis protein RibD [Campylobacter jejuni subsp.
           jejuni 81-176]
          Length = 336

 Score = 72.3 bits (177), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 40/177 (22%), Positives = 64/177 (36%), Gaps = 44/177 (24%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAV-LNNKIIS-RAGNRNRELKDVTAHAE 55
           MK    +M+ AL EA         P   VG V +  N KI++ +A       K   AHAE
Sbjct: 11  MK--EFYMNLALNEAWK-YQFLTYPNPAVGCVILDKNGKILAIKAH-----EKAGLAHAE 62

Query: 56  ILAIRMGCRILSQEI--------------------LPEVDLYVTLEPC------TMCAAA 89
           + AI    + L  EI                      +   +VTLEPC        CA  
Sbjct: 63  LNAITHAFKSLRPEISLPKEANALHEFICKNHQGVFKDSIAFVTLEPCSHQGKTPPCAKL 122

Query: 90  ISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
            S    ++++    +        G +F          E+   I ++  +++++ F K
Sbjct: 123 FSELGFKKIFISVKDGNKIASG-GAEFLKKQG----IEVEFDILKEEGKKLLKPFLK 174


>gi|86152942|ref|ZP_01071147.1| riboflavin biosynthesis protein RibD [Campylobacter jejuni subsp.
           jejuni HB93-13]
 gi|167006160|ref|ZP_02271918.1| riboflavin biosynthesis protein RibD [Campylobacter jejuni subsp.
           jejuni 81-176]
 gi|85843827|gb|EAQ61037.1| riboflavin biosynthesis protein RibD [Campylobacter jejuni subsp.
           jejuni HB93-13]
          Length = 326

 Score = 72.3 bits (177), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 40/177 (22%), Positives = 64/177 (36%), Gaps = 44/177 (24%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAV-LNNKIIS-RAGNRNRELKDVTAHAE 55
           MK    +M+ AL EA         P   VG V +  N KI++ +A       K   AHAE
Sbjct: 1   MK--EFYMNLALNEAWK-YQFLTYPNPAVGCVILDKNGKILAIKAH-----EKAGLAHAE 52

Query: 56  ILAIRMGCRILSQEI--------------------LPEVDLYVTLEPC------TMCAAA 89
           + AI    + L  EI                      +   +VTLEPC        CA  
Sbjct: 53  LNAITHAFKSLRPEISLPKEANALHEFICKNHQGVFKDSIAFVTLEPCSHQGKTPPCAKL 112

Query: 90  ISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
            S    ++++    +        G +F          E+   I ++  +++++ F K
Sbjct: 113 FSELGFKKIFISVKDGNKIASG-GAEFLKKQG----IEVEFDILKEEGKKLLKPFLK 164


>gi|224500498|ref|ZP_03668847.1| hypothetical protein LmonF1_12846 [Listeria monocytogenes Finland
           1988]
 gi|224501577|ref|ZP_03669884.1| hypothetical protein LmonFR_03502 [Listeria monocytogenes FSL
           R2-561]
          Length = 160

 Score = 72.3 bits (177), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 25/91 (27%), Positives = 39/91 (42%), Gaps = 17/91 (18%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKD---------------VTAHAEILAIRMGCRILSQEI 70
           VGA  V + +II+   N +    D                T HAE+ AI    +  +   
Sbjct: 2   VGATIVRDKRIIAGGYNGSIAGGDHCAEHGCYVVDGHCIRTIHAEMNAILQCAKFGATTD 61

Query: 71  LPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
             + +LYVT  PC  C  +I  A I+++Y+ 
Sbjct: 62  --KAELYVTHFPCLACTKSIIQAGIKKVYFA 90


>gi|313623713|gb|EFR93860.1| ComE operon protein 2 [Listeria innocua FSL J1-023]
          Length = 186

 Score = 72.3 bits (177), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 25/91 (27%), Positives = 39/91 (42%), Gaps = 17/91 (18%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKD---------------VTAHAEILAIRMGCRILSQEI 70
           VGA  V + +II+   N +    D                T HAE+ AI    +  +   
Sbjct: 28  VGATIVRDKRIIAGGYNGSIAGGDHCAEHGCYVVDGHCIRTIHAEMNAILQCAKFGASTD 87

Query: 71  LPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
             + +LYVT  PC  C  +I  A I+++Y+ 
Sbjct: 88  --KAELYVTHFPCLACTKSIIQAGIKKVYFA 116


>gi|226508300|ref|NP_001147072.1| hydrolase/ zinc ion binding protein [Zea mays]
 gi|195607072|gb|ACG25366.1| hydrolase/ zinc ion binding protein [Zea mays]
          Length = 412

 Score = 72.3 bits (177), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 17/58 (29%), Positives = 30/58 (51%)

Query: 72  PEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIY 129
              D+Y+  EPCTMCA A+   R +R++Y   NP  G +    + +   + +H   ++
Sbjct: 336 TGFDIYLVWEPCTMCAMALVHHRFKRVFYAFPNPVAGALGGVYRLHGERSLNHHYNVF 393


>gi|217964371|ref|YP_002350049.1| ComE operon protein 2 [Listeria monocytogenes HCC23]
 gi|217333641|gb|ACK39435.1| ComE operon protein 2 [Listeria monocytogenes HCC23]
          Length = 160

 Score = 72.3 bits (177), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 25/91 (27%), Positives = 39/91 (42%), Gaps = 17/91 (18%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKD---------------VTAHAEILAIRMGCRILSQEI 70
           VGA  V + +II+   N +    D                T HAE+ AI    +  +   
Sbjct: 2   VGATIVRDKRIIAGGYNGSIAGGDHCAEHGCYVVDGHCIRTIHAEMNAILQCAKFGATTD 61

Query: 71  LPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
             + +LYVT  PC  C  +I  A I+++Y+ 
Sbjct: 62  --KAELYVTHFPCLACTKSIIQAGIKKVYFA 90


>gi|108804483|ref|YP_644420.1| CMP/dCMP deaminase [Rubrobacter xylanophilus DSM 9941]
 gi|108765726|gb|ABG04608.1| CMP/dCMP deaminase, zinc-binding protein [Rubrobacter xylanophilus
           DSM 9941]
          Length = 157

 Score = 72.3 bits (177), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 32/126 (25%), Positives = 46/126 (36%), Gaps = 30/126 (23%)

Query: 4   GNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRN---------------- 44
              FM  A E A  +      P   VGAV V + +I++   N +                
Sbjct: 16  DEYFMRIAHEVATRSTC----PRLAVGAVVVRDRRILTTGYNGSPSGMPHCDEVGCLIRV 71

Query: 45  ---RELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY- 100
              RE    T HAE  A+             +  +Y T +PC +C   I  + IR +YY 
Sbjct: 72  VDGRESCQRTLHAEQNALIQAAYHGVSVR--DAAMYCTHQPCLLCVKMIMNSGIREVYYA 129

Query: 101 -GASNP 105
            G  +P
Sbjct: 130 GGYPDP 135


>gi|20091386|ref|NP_617461.1| hypothetical protein MA2559 [Methanosarcina acetivorans C2A]
 gi|19916523|gb|AAM05941.1| hypothetical protein (multi-domain) [Methanosarcina acetivorans
           C2A]
          Length = 206

 Score = 72.3 bits (177), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 22/101 (21%), Positives = 41/101 (40%), Gaps = 3/101 (2%)

Query: 14  EAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELK-DVTAHAEILAIRMGCRILSQ-EI 70
            A  +       VG++ V  + K+IS   N           H E++A+ +          
Sbjct: 55  LALKSVDSGNYGVGSILVDADGKVISMGHNLVYSPHFRSDLHGEMVALNLFENEHPNITT 114

Query: 71  LPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIE 111
           L    LY +LE C MC   +  + +  + + +S+P+ G + 
Sbjct: 115 LEGYTLYTSLESCPMCLIRLISSGVNAILHVSSDPRAGMVG 155


>gi|313618870|gb|EFR90742.1| ComE operon protein 2 [Listeria innocua FSL S4-378]
          Length = 186

 Score = 72.3 bits (177), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 25/91 (27%), Positives = 39/91 (42%), Gaps = 17/91 (18%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKD---------------VTAHAEILAIRMGCRILSQEI 70
           VGA  V + +II+   N +    D                T HAE+ AI    +  +   
Sbjct: 28  VGATIVRDKRIIAGGYNGSIAGGDHCAEHGCYVVDGHCIRTIHAEMNAILQCAKFGASTD 87

Query: 71  LPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
             + +LYVT  PC  C  +I  A I+++Y+ 
Sbjct: 88  --KAELYVTHFPCLACTKSIIQAGIKKVYFA 116


>gi|293401503|ref|ZP_06645646.1| probable deoxycytidylate deaminase [Erysipelotrichaceae bacterium
           5_2_54FAA]
 gi|291305141|gb|EFE46387.1| probable deoxycytidylate deaminase [Erysipelotrichaceae bacterium
           5_2_54FAA]
          Length = 161

 Score = 72.3 bits (177), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 32/122 (26%), Positives = 45/122 (36%), Gaps = 31/122 (25%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVL-NNKIISRAGN-------------R 43
           +     FM  A   A  +      P   VGAV V   ++++S   N              
Sbjct: 7   LSWDEYFMGLAHLSAMRSKD----PSTQVGAVIVSGEHRVVSIGYNGFPNGCSDDEFPWD 62

Query: 44  NRELKDVTA-----HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98
                  T      HAE+ AI     + S+  L    +YV+L PC  CA AI  + I R+
Sbjct: 63  REGDFGATKYPYVVHAELNAI-----LNSKNDLRGCSIYVSLFPCNECAKAIIQSGISRI 117

Query: 99  YY 100
            Y
Sbjct: 118 VY 119


>gi|222153659|ref|YP_002562836.1| cytidine and deoxycytidylate deaminase [Streptococcus uberis 0140J]
 gi|222114472|emb|CAR43320.1| putative cytidine and deoxycytidylate deaminase [Streptococcus
           uberis 0140J]
          Length = 151

 Score = 72.3 bits (177), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 25/90 (27%), Positives = 37/90 (41%), Gaps = 17/90 (18%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKD---------------VTAHAEILAIRMGCRILSQEI 70
           VGAV V +N+II+   N      D                T HAE+ A+    +      
Sbjct: 29  VGAVLVKDNRIIATGYNGGVSATDNCDEAGHYMEDGHCIRTVHAEMNALIQCAKEGISTD 88

Query: 71  LPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
               ++YVT  PC  C  A+  A I+++ Y
Sbjct: 89  --GTEIYVTHFPCINCTKALLQAGIKKITY 116


>gi|321262599|ref|XP_003196018.1| cytosine deaminase [Cryptococcus gattii WM276]
 gi|317462493|gb|ADV24231.1| cytosine deaminase, putative [Cryptococcus gattii WM276]
          Length = 252

 Score = 72.3 bits (177), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 33/111 (29%), Positives = 47/111 (42%), Gaps = 14/111 (12%)

Query: 6   VFMSCALEEAQNAALRN--EIPVGAVAVL--NNKIISRAGNRNRELKDVTAHAEILAIRM 61
            +M  A  EA  A      + P G   V   +++++    N+     +   H EI AI  
Sbjct: 39  HWMRVA-NEAVYADGHPCPQAPFGTAIVNTTSDELVCVTSNKVGVTGNPAMHGEISAITH 97

Query: 62  GCRIL------SQEILPE---VDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
              +L       QEIL     + LY   EPC MCA+AI  A  + + YG S
Sbjct: 98  CTEVLTGQGWTPQEILAGWKDLSLYTNGEPCPMCASAIRWAGFKEVIYGTS 148


>gi|326773583|ref|ZP_08232866.1| riboflavin biosynthesis protein RibD [Actinomyces viscosus C505]
 gi|326636813|gb|EGE37716.1| riboflavin biosynthesis protein RibD [Actinomyces viscosus C505]
          Length = 362

 Score = 72.3 bits (177), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 27/145 (18%), Positives = 51/145 (35%), Gaps = 24/145 (16%)

Query: 11  ALEEAQNAALRNEIP------VGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
           A++ A  AA   + P      VG V +  +  +++   +R       +AHAE+ A+    
Sbjct: 11  AMQRALRAAASPDTPPGPNPRVGCVILSSDGDVLAEGHHR----GAGSAHAEVDALANLA 66

Query: 64  RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFY 117
              +        + VTLEPC        C  A+  A +  + Y   +P            
Sbjct: 67  ATGASAR--GATVLVTLEPCNHQGRTGPCVQALLDAGVAEVIYAQDDPTEQAGGGAATLE 124

Query: 118 TLATCHHSPEIYPGISEQRSRQIIQ 142
                     +  G+  Q + ++ +
Sbjct: 125 AG-----GVRVRRGLCAQEAARLNR 144


>gi|254030277|gb|ACT53870.1| DRAP deaminase [Candida membranifaciens]
          Length = 357

 Score = 72.3 bits (177), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 36/151 (23%), Positives = 57/151 (37%), Gaps = 20/151 (13%)

Query: 5   NVFMSCALEEAQNAALRNEIP----VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           N +M  A+E A+      E      VGAV V + +I+     R  E      HAE  A+ 
Sbjct: 211 NKYMELAIELAEK---CGETTTQFNVGAVLVYDGEILGTGHTRELEGN---THAEQCALE 264

Query: 61  MGCRILSQEILP-EVDLYVTLEPC-------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
                  +  +P    +Y ++EPC         C   I    I   + G   P G  +++
Sbjct: 265 KYFTRTGERNVPYGTKIYTSMEPCSFRLSGNLPCVERILQTNITTCFVGVVEP-GDFVKD 323

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQD 143
            T   TL +        PG  E++  +I + 
Sbjct: 324 NTSVQTLESKGVEYIHIPGY-EEKCLEIAKR 353


>gi|307107383|gb|EFN55626.1| hypothetical protein CHLNCDRAFT_133790 [Chlorella variabilis]
          Length = 449

 Score = 72.3 bits (177), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 17/64 (26%), Positives = 33/64 (51%)

Query: 72  PEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPG 131
              D YV  EPCTMCA A+  +R+RR+ +  ++ + G +    + +   + +H  ++Y  
Sbjct: 383 TGYDCYVLREPCTMCAMALVHSRLRRVVFCCADRRYGALGGAFRLHAQRSLNHHYQVYRL 442

Query: 132 ISEQ 135
              +
Sbjct: 443 PLAE 446


>gi|257067228|ref|YP_003153483.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase
           /5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Brachybacterium faecium DSM 4810]
 gi|256558046|gb|ACU83893.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase
           /5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Brachybacterium faecium DSM 4810]
          Length = 355

 Score = 72.3 bits (177), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 31/121 (25%), Positives = 44/121 (36%), Gaps = 19/121 (15%)

Query: 9   SCALEEAQNAALRNEIP------VGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRM 61
             AL  A   A    +P      VG V +  +  +++   +R       TAHAE  A+  
Sbjct: 7   RRALARALEIAADPSVPLGPNPRVGCVLLGADGAMLAEGHHR----GAGTAHAEADALAR 62

Query: 62  GCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQ 115
             R L    L      VTLEPC        CA A+  A I R+    ++P         +
Sbjct: 63  A-RSLGIP-LTGATAVVTLEPCAHTGRTGPCAEALLEAGIGRVVIARTDPNPVASGGIDR 120

Query: 116 F 116
            
Sbjct: 121 L 121


>gi|86157977|ref|YP_464762.1| zinc-binding CMP/dCMP deaminase [Anaeromyxobacter dehalogenans
           2CP-C]
 gi|197122718|ref|YP_002134669.1| CMP/dCMP deaminase zinc-binding [Anaeromyxobacter sp. K]
 gi|220917501|ref|YP_002492805.1| CMP/dCMP deaminase zinc-binding [Anaeromyxobacter dehalogenans
           2CP-1]
 gi|85774488|gb|ABC81325.1| zinc-binding CMP/dCMP deaminase [Anaeromyxobacter dehalogenans
           2CP-C]
 gi|196172567|gb|ACG73540.1| CMP/dCMP deaminase zinc-binding [Anaeromyxobacter sp. K]
 gi|219955355|gb|ACL65739.1| CMP/dCMP deaminase zinc-binding [Anaeromyxobacter dehalogenans
           2CP-1]
          Length = 164

 Score = 72.3 bits (177), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 29/113 (25%), Positives = 40/113 (35%), Gaps = 18/113 (15%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRE---------------LK 48
              FM+ A   A  A    +  VGAV V +  I+S   N +                   
Sbjct: 8   DEYFMNVARVVATRATCDRKH-VGAVLVRDKTILSTGYNGSIRGLPHCSEAGHMMEDGHC 66

Query: 49  DVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
             T HAE  AI    +      +    +Y T  PC  C   I+ A  RR+ +G
Sbjct: 67  VATVHAEANAIIQAAKNGVA--IEGASIYTTASPCWPCFKLIANAGCRRIVFG 117


>gi|83591205|ref|YP_431214.1| CMP/dCMP deaminase, zinc-binding [Moorella thermoacetica ATCC
           39073]
 gi|83574119|gb|ABC20671.1| CMP/dCMP deaminase, zinc-binding protein [Moorella thermoacetica
           ATCC 39073]
          Length = 135

 Score = 72.3 bits (177), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 33/118 (27%), Positives = 44/118 (37%), Gaps = 22/118 (18%)

Query: 1   MKK--GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGN---------------R 43
           M+K     F+  A + A  +     + VGAV V + +I     N                
Sbjct: 1   MRKEWDEYFLDIAFQVASRSTCNR-LAVGAVVVKDKRIKGTGYNGAPHGLPHCLEVGCLM 59

Query: 44  NRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
             E    T HAEI A+       S E      +YVT  PC  CA  I  + I+RL Y 
Sbjct: 60  EGEHCLRTIHAEINALLE----CSPEERQGATMYVTDYPCERCALVIVQSGIKRLVYA 113


>gi|150951310|ref|XP_001387615.2| deoxycytidylate deaminase [Scheffersomyces stipitis CBS 6054]
 gi|149388487|gb|EAZ63592.2| deoxycytidylate deaminase [Pichia stipitis CBS 6054]
          Length = 341

 Score = 72.3 bits (177), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 30/123 (24%), Positives = 41/123 (33%), Gaps = 31/123 (25%)

Query: 4   GNVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRN--------RELKDVTA- 52
            + FM  A + A  A   N  +  VGAV V  N++I+   N              D    
Sbjct: 193 DSYFMRLA-DLA--ALRSNCMKRRVGAVIVHENRVIATGYNGTPRHLTNCNEGGCDRCNK 249

Query: 53  --------------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98
                         HAE  A+    R     I  E  LY    PC  C+  I  + I+ +
Sbjct: 250 GSVGGTSLLTCLCLHAEENALLEAGR---DRIRGEAVLYCNTCPCLTCSIKIVQSGIKEV 306

Query: 99  YYG 101
            Y 
Sbjct: 307 VYA 309


>gi|322412648|gb|EFY03556.1| ComE operon protein 2 [Streptococcus dysgalactiae subsp.
           dysgalactiae ATCC 27957]
          Length = 155

 Score = 71.9 bits (176), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 25/90 (27%), Positives = 37/90 (41%), Gaps = 17/90 (18%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKD---------------VTAHAEILAIRMGCRILSQEI 70
           VGAV V +N+II+   N      D                T HAE+ A+    +      
Sbjct: 29  VGAVLVKDNRIIATGYNGGVSATDNCNEAGHYMEDGHCIRTVHAEMNALIQCAKEGISTD 88

Query: 71  LPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
               ++YVT  PC  C  A+  A I+++ Y
Sbjct: 89  --GTEIYVTHFPCINCTKALLQAGIKKITY 116


>gi|218261316|ref|ZP_03476184.1| hypothetical protein PRABACTJOHN_01850 [Parabacteroides johnsonii
           DSM 18315]
 gi|218224097|gb|EEC96747.1| hypothetical protein PRABACTJOHN_01850 [Parabacteroides johnsonii
           DSM 18315]
          Length = 144

 Score = 71.9 bits (176), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 29/112 (25%), Positives = 46/112 (41%), Gaps = 15/112 (13%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRN--------RELKDVT- 51
           ++    ++  A   A+N+  +    VGA+ V +  IIS   N           +  +VT 
Sbjct: 9   LELDKRYLRMAAVWAENSYCKR-RQVGALIVRDQMIISDGYNGTPSGFENVCEDENNVTK 67

Query: 52  ---AHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
               HAE  AI       +     +  +YVT  PC  CA  I  + I+R+ Y
Sbjct: 68  PYVLHAEANAITKVAASSNSS--KDATIYVTSAPCIECAKLIIQSGIKRVVY 117


>gi|169825268|ref|YP_001692879.1| putative late competence protein required for DNA binding
           [Finegoldia magna ATCC 29328]
 gi|167832073|dbj|BAG08989.1| putative late competence protein required for DNA binding
           [Finegoldia magna ATCC 29328]
          Length = 139

 Score = 71.9 bits (176), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 30/118 (25%), Positives = 43/118 (36%), Gaps = 21/118 (17%)

Query: 1   MKK--GNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGN--------------- 42
           M+K     FM  AL  A  +       VG V V  +N+I+S   N               
Sbjct: 1   MRKSWNEYFMDLALNVATRSTCDRAF-VGCVLVNSDNRIVSTGYNGAISGNPHCDEVGHT 59

Query: 43  RNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
                   T HAE+ A+    +      +     YVT  PC  C  ++  A I ++YY
Sbjct: 60  LRDGHCIATIHAEMNALLYCAKEGIA--VKGCICYVTHFPCLNCTKSLIQAGISKIYY 115


>gi|116872912|ref|YP_849693.1| zinc-binding, ComEB family competence protein [Listeria welshimeri
           serovar 6b str. SLCC5334]
 gi|116741790|emb|CAK20914.1| zinc-binding, ComEB family competence protein [Listeria welshimeri
           serovar 6b str. SLCC5334]
          Length = 186

 Score = 71.9 bits (176), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 26/91 (28%), Positives = 38/91 (41%), Gaps = 17/91 (18%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKD---------------VTAHAEILAIRMGCRILSQEI 70
           VGA  V + +II+   N +    D                T HAE+ AI    +  +   
Sbjct: 28  VGATIVRDKRIIAGGYNGSIAGGDHCAEHGCYVVDGHCIRTIHAEMNAILQCAKFGASTD 87

Query: 71  LPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
             E  LYVT  PC  C  +I  A I+++Y+ 
Sbjct: 88  RAE--LYVTHFPCLACTKSIIQAGIKKVYFA 116


>gi|333030069|ref|ZP_08458130.1| CMP/dCMP deaminase zinc-binding [Bacteroides coprosuis DSM 18011]
 gi|332740666|gb|EGJ71148.1| CMP/dCMP deaminase zinc-binding [Bacteroides coprosuis DSM 18011]
          Length = 146

 Score = 71.9 bits (176), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 26/87 (29%), Positives = 34/87 (39%), Gaps = 14/87 (16%)

Query: 26  VGAVAVLNNKIISRAGNRN--------RELKDVT----AHAEILAIRMGCRILSQEILPE 73
           VGA+ V +  IIS   N           +  + T     HAE  AI       +      
Sbjct: 36  VGALIVKDKMIISDGYNGTPSGFENICEDDNNTTKPYVLHAEANAITKIACSNNSSD--G 93

Query: 74  VDLYVTLEPCTMCAAAISLARIRRLYY 100
             +YVT  PC  CA  I  A I+R+ Y
Sbjct: 94  ATMYVTAAPCIECAKLIIQAGIKRVVY 120


>gi|326693482|ref|ZP_08230487.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase /
           diaminohydroxyphosphoribosylaminopyrimidine deaminase
           [Leuconostoc argentinum KCTC 3773]
          Length = 352

 Score = 71.9 bits (176), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 35/132 (26%), Positives = 51/132 (38%), Gaps = 21/132 (15%)

Query: 23  EIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81
           E P VGAV V +N++++   +         AHAEI A                 LYVTLE
Sbjct: 24  ENPRVGAVIVKDNQVLAVGWHERFGG----AHAEINAFHHLGAAHDA---QGGTLYVTLE 76

Query: 82  PCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISE- 134
           PC +      CA  I    + R+  G  +P       G Q    A       +   + + 
Sbjct: 77  PCAVRGKVAACAETIRDWGLARVVIGDLDPNPTTHGLGVQKLRAAG----ISVV--VLDT 130

Query: 135 QRSRQIIQDFFK 146
             SRQ+   F++
Sbjct: 131 DDSRQLNPAFYQ 142


>gi|312885990|ref|ZP_07745618.1| CMP/dCMP deaminase zinc-binding [Mucilaginibacter paludis DSM
           18603]
 gi|311301527|gb|EFQ78568.1| CMP/dCMP deaminase zinc-binding [Mucilaginibacter paludis DSM
           18603]
          Length = 150

 Score = 71.9 bits (176), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 34/126 (26%), Positives = 49/126 (38%), Gaps = 32/126 (25%)

Query: 1   MKK---GNVFMSCALEEAQNAA---LRNEIPVGAVAVLNNKIISRAGN------------ 42
           M+K    ++FM+ AL+ AQ +     +    VGAV   + +IIS   N            
Sbjct: 1   MQKPSFEHIFMNLALDLAQRSHCVKAQ----VGAVLAKDTRIISIGYNGPPAGTHNCDEE 56

Query: 43  ------RNRELKDVTA--HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLAR 94
                         +   HAE  AI     + +   L    LY TL PC  CA  I  A 
Sbjct: 57  WPETGCARDAKGSCSLALHAEENAILYA--VKNGARLEGATLYTTLSPCLPCARLIFSAG 114

Query: 95  IRRLYY 100
           I+ +Y+
Sbjct: 115 IKHVYF 120


>gi|47094097|ref|ZP_00231822.1| comE operon protein 2 [Listeria monocytogenes str. 4b H7858]
 gi|47017527|gb|EAL08335.1| comE operon protein 2 [Listeria monocytogenes str. 4b H7858]
          Length = 160

 Score = 71.9 bits (176), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 25/91 (27%), Positives = 39/91 (42%), Gaps = 17/91 (18%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKD---------------VTAHAEILAIRMGCRILSQEI 70
           VGA  V + +II+   N +    D                T HAE+ AI    +  +   
Sbjct: 2   VGATIVRDKRIIAGGYNGSIAGGDHCAEHGCYVVDGHCIRTIHAEMNAILQCAKFGATTD 61

Query: 71  LPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
             + +LYVT  PC  C  +I  A I+++Y+ 
Sbjct: 62  --KAELYVTHFPCLACTKSIIQAGIKKVYFA 90


>gi|313681592|ref|YP_004059330.1| riboflavin biosynthesis protein ribd [Sulfuricurvum kujiense DSM
           16994]
 gi|313154452|gb|ADR33130.1| riboflavin biosynthesis protein RibD [Sulfuricurvum kujiense DSM
           16994]
          Length = 336

 Score = 71.9 bits (176), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 39/171 (22%), Positives = 57/171 (33%), Gaps = 42/171 (24%)

Query: 8   MSCALEEAQNAALRNEIP---VGAV-AVLNNKIISRAGNRNRELKDVTAHAEILAIRMG- 62
           M+ AL  A         P   VGAV    N  ++S   ++         HAE+ A+R   
Sbjct: 10  MTLALNAAWE-YQLLTFPNPAVGAVCLSDNGTVVSVGTHKRAGG----PHAEVYALRDAY 64

Query: 63  ---------------------CRILSQEILPEVDLYVTLEPC------TMCAAAISLARI 95
                                 R     I   V + VTLEPC        CA  I    I
Sbjct: 65  TLLSGDTTIAGCDDSHRIHDYLRTRHNGIFHTVSMAVTLEPCSHSGKTPSCALLIRDLGI 124

Query: 96  RRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
           +R+Y    +P       G    + A      E   GI E+   ++++ F +
Sbjct: 125 KRVYISVKDPNPAAAG-GASLLSDAGA----ECVFGIMEEEGEKLLEPFIR 170


>gi|313886183|ref|ZP_07819913.1| dCMP deaminase [Porphyromonas asaccharolytica PR426713P-I]
 gi|332299700|ref|YP_004441621.1| CMP/dCMP deaminase zinc-binding protein [Porphyromonas
           asaccharolytica DSM 20707]
 gi|312924362|gb|EFR35141.1| dCMP deaminase [Porphyromonas asaccharolytica PR426713P-I]
 gi|332176763|gb|AEE12453.1| CMP/dCMP deaminase zinc-binding protein [Porphyromonas
           asaccharolytica DSM 20707]
          Length = 161

 Score = 71.9 bits (176), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 32/110 (29%), Positives = 45/110 (40%), Gaps = 15/110 (13%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRN--------RELKDVT---- 51
              ++  A   A+N+  R    VGA+ V N  IIS   N           + + +T    
Sbjct: 19  DRRYLRMARIWAENSYCRR-RQVGALIVHNQMIISDGYNGTPSGFENVCEDDEGITKPYV 77

Query: 52  AHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
            HAE  AI       +        +Y+T  PC  CA  I  +RIRR+ YG
Sbjct: 78  LHAEANAITKVAASGNN--CTGATIYITASPCLECAKLIIQSRIRRVVYG 125


>gi|167765731|ref|ZP_02437784.1| hypothetical protein CLOSS21_00220 [Clostridium sp. SS2/1]
 gi|317497038|ref|ZP_07955366.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Lachnospiraceae bacterium 5_1_63FAA]
 gi|167712583|gb|EDS23162.1| hypothetical protein CLOSS21_00220 [Clostridium sp. SS2/1]
 gi|291558932|emb|CBL37732.1| Deoxycytidylate deaminase [butyrate-producing bacterium SSC/2]
 gi|316895698|gb|EFV17852.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Lachnospiraceae bacterium 5_1_63FAA]
          Length = 159

 Score = 71.9 bits (176), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 33/127 (25%), Positives = 46/127 (36%), Gaps = 25/127 (19%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRN-----------RELK 48
           +     FM  A+  AQ +   +   VGA  V + NKI+S   N                 
Sbjct: 7   ISWDQYFMGIAILSAQRSKD-DHTQVGACLVNDHNKILSVGYNGMPIGCNDDDMPWEREG 65

Query: 49  DVTA-------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
           D          HAE+ AI           L    +YVTL PC  CA AI  + ++ + Y 
Sbjct: 66  DPLHTKYFYVCHAELNAILN----YGGGSLDGARVYVTLFPCNECAKAIIQSGMKEVIY- 120

Query: 102 ASNPKGG 108
             +   G
Sbjct: 121 MQDKYAG 127


>gi|260592105|ref|ZP_05857563.1| cytidine/deoxycytidylate deaminase family protein [Prevotella
           veroralis F0319]
 gi|260535983|gb|EEX18600.1| cytidine/deoxycytidylate deaminase family protein [Prevotella
           veroralis F0319]
          Length = 144

 Score = 71.9 bits (176), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 33/110 (30%), Positives = 43/110 (39%), Gaps = 15/110 (13%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNR-------ELKDVTA---- 52
              ++  A   A+N+  R    VGA+ V +  IIS   N          E +  T     
Sbjct: 9   DYRYLRMARIWAENSYCRR-RQVGALVVKDKMIISDGYNGTPSGFENICEDESGTTFPYV 67

Query: 53  -HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
            HAE  AI    R  +        LYVT  PC  C+  I  A IRR+ Y 
Sbjct: 68  LHAEANAITKLARSSNNSD--GATLYVTASPCIECSKLIIQAGIRRVVYA 115


>gi|54112173|gb|AAV28775.1| FCY1p [Cryptococcus gattii]
          Length = 232

 Score = 71.9 bits (176), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 33/111 (29%), Positives = 47/111 (42%), Gaps = 14/111 (12%)

Query: 6   VFMSCALEEAQNAALRN--EIPVGAVAVL--NNKIISRAGNRNRELKDVTAHAEILAIRM 61
            +M  A  EA  A      + P G   V   +++++    N+     +   H EI AI  
Sbjct: 39  HWMRVA-NEAVYADGHPCPQAPFGTAIVNTTSDELVCVTSNKVGVTGNPAMHGEISAITH 97

Query: 62  GCRIL------SQEILPE---VDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
              +L       QEIL     + LY   EPC MCA+AI  A  + + YG S
Sbjct: 98  CTEVLTGQGWTPQEILAGWKDLSLYTNGEPCPMCASAIRWAGFKEVIYGTS 148


>gi|319901309|ref|YP_004161037.1| CMP/dCMP deaminase zinc-binding protein [Bacteroides helcogenes P
           36-108]
 gi|319416340|gb|ADV43451.1| CMP/dCMP deaminase zinc-binding protein [Bacteroides helcogenes P
           36-108]
          Length = 145

 Score = 71.9 bits (176), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 27/87 (31%), Positives = 36/87 (41%), Gaps = 14/87 (16%)

Query: 26  VGAVAVLNNKIISRAGNRN--------RELKDVT----AHAEILAIRMGCRILSQEILPE 73
           VGA+ V +  IIS   N           +  +VT     HAE  AI    R  +      
Sbjct: 34  VGALIVKDKMIISDGYNGTPAGFENICEDENNVTKPYVLHAEANAITKIARSNNSSN--G 91

Query: 74  VDLYVTLEPCTMCAAAISLARIRRLYY 100
             +YVT  PC  C+  I  A I+R+ Y
Sbjct: 92  ATMYVTASPCIECSKLIIQAGIKRVVY 118


>gi|114704832|ref|ZP_01437740.1| riboflavin-specific deaminase / reductase [Fulvimarina pelagi
           HTCC2506]
 gi|114539617|gb|EAU42737.1| riboflavin-specific deaminase / reductase [Fulvimarina pelagi
           HTCC2506]
          Length = 381

 Score = 71.9 bits (176), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 29/153 (18%), Positives = 53/153 (34%), Gaps = 25/153 (16%)

Query: 4   GNVFMSCALEEA-QNAALRNEIP-VGAVAVLNN----KIISRAGNRNRELKDVTAHAEIL 57
              FM+ A+    ++A L    P V  + V ++    +I+ R        +    HAE  
Sbjct: 18  NERFMAAAIRFGFRHAGLTGTNPSVATLIVRDDGAGPRIVGRG----ITARGGRPHAEAQ 73

Query: 58  AIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIE 111
           A+     +           YVTLEPC        CA A+  + + R+   A++P      
Sbjct: 74  ALGEAGTLA-----RGAVAYVTLEPCAHHGRTPPCAEALVASGVSRVVSAAADPDPRVDG 128

Query: 112 NGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
            G              + P +  + +   +  +
Sbjct: 129 KGHAILEKGGL----SVTPRVMAKEAASDLSAY 157


>gi|54112139|gb|AAV28742.1| FCY1p [Cryptococcus gattii]
          Length = 232

 Score = 71.9 bits (176), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 33/111 (29%), Positives = 47/111 (42%), Gaps = 14/111 (12%)

Query: 6   VFMSCALEEAQNAALRN--EIPVGAVAVL--NNKIISRAGNRNRELKDVTAHAEILAIRM 61
            +M  A  EA  A      + P G   V   +++++    N+     +   H EI AI  
Sbjct: 39  HWMRVA-NEAVYADGHPCPQAPFGTAIVNTTSDELVCVTSNKVGVTGNPAMHGEISAITH 97

Query: 62  GCRIL------SQEILPE---VDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
              +L       QEIL     + LY   EPC MCA+AI  A  + + YG S
Sbjct: 98  CTEVLTGQGWTPQEILAGWKDLSLYTNGEPCPMCASAIRWAGFKEVIYGTS 148


>gi|190347088|gb|EDK39300.2| hypothetical protein PGUG_03398 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 611

 Score = 71.9 bits (176), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 31/147 (21%), Positives = 56/147 (38%), Gaps = 14/147 (9%)

Query: 3   KGNVFMSCALEEAQN-AALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
               FM  AL EA+     + +  VGAV V   ++++   +R         HAE  A+  
Sbjct: 455 SHRPFMELALSEAEKCGETQTQFNVGAVLVHEGEVLATGHSRELPGN---THAEQCALEK 511

Query: 62  GCRILSQEILP-EVDLYVTLEPCT-------MCAAAISLARIRRLYYGASNPKGGGIENG 113
             +  +   +P    +Y T+EPC+        C   I    I+  + G   P    +++ 
Sbjct: 512 YFKASNSTEVPEGTVIYTTMEPCSFRLSGNEPCVQRILKTCIKTCFVGVIEPDT-FVKDN 570

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQI 140
           +    L+          G  E++  +I
Sbjct: 571 SSLRQLSDNGVDYVHIGGY-EEKCLEI 596


>gi|146416095|ref|XP_001484017.1| hypothetical protein PGUG_03398 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 611

 Score = 71.9 bits (176), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 31/147 (21%), Positives = 56/147 (38%), Gaps = 14/147 (9%)

Query: 3   KGNVFMSCALEEAQN-AALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
               FM  AL EA+     + +  VGAV V   ++++   +R         HAE  A+  
Sbjct: 455 SHRPFMELALSEAEKCGETQTQFNVGAVLVHEGEVLATGHSRELPGN---THAEQCALEK 511

Query: 62  GCRILSQEILP-EVDLYVTLEPCT-------MCAAAISLARIRRLYYGASNPKGGGIENG 113
             +  +   +P    +Y T+EPC+        C   I    I+  + G   P    +++ 
Sbjct: 512 YFKASNSTEVPEGTVIYTTMEPCSFRLSGNEPCVQRILKTCIKTCFVGVIEPDT-FVKDN 570

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQI 140
           +    L+          G  E++  +I
Sbjct: 571 SSLRQLSDNGVDYVHIGGY-EEKCLEI 596


>gi|255728969|ref|XP_002549410.1| deoxycytidylate deaminase [Candida tropicalis MYA-3404]
 gi|240133726|gb|EER33282.1| deoxycytidylate deaminase [Candida tropicalis MYA-3404]
          Length = 339

 Score = 71.9 bits (176), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 30/123 (24%), Positives = 43/123 (34%), Gaps = 31/123 (25%)

Query: 4   GNVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGN---------------RNRE 46
            + FM  A + A  A   N  +  VG V V  N++I+   N               R  +
Sbjct: 191 DSYFMRLA-DLA--ALRSNCMKRRVGCVIVRENRVIATGYNGTPRHLTNCNDGGCSRCNK 247

Query: 47  LKDVTA--------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98
            +   A        HAE  A+    R     I  E  LY    PC  C+  I  + I+ +
Sbjct: 248 GQGSGASLSTCLCLHAEENALLEAGR---DRIRGESVLYCNTCPCLTCSIKIVQSGIKEV 304

Query: 99  YYG 101
            Y 
Sbjct: 305 VYA 307


>gi|158314624|ref|YP_001507132.1| CMP/dCMP deaminase zinc-binding [Frankia sp. EAN1pec]
 gi|158110029|gb|ABW12226.1| CMP/dCMP deaminase zinc-binding [Frankia sp. EAN1pec]
          Length = 150

 Score = 71.9 bits (176), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 32/112 (28%), Positives = 46/112 (41%), Gaps = 14/112 (12%)

Query: 3   KGNVFMSCALEEAQNA-ALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIR 60
             + +M+ A+E A           VGAV V  NN+ I+   +R  E+ D   HAE  A+ 
Sbjct: 5   DDHHWMTRAIELAHRCPPATGAYSVGAVIVDENNEEIAFGFSR--EVDDAV-HAEESAL- 60

Query: 61  MGCRILSQEILPEVDLYVTLEPCTM-------CAAAISLARIRRLYYGASNP 105
                 +   L    +Y TLEPC+        C   I  A+I R+      P
Sbjct: 61  -AKIDPADPRLATATIYSTLEPCSQRKSRPRTCTQLILEAKIPRVVIAWREP 111


>gi|56566242|gb|AAV98449.1| FCY1 [Cryptococcus neoformans var. grubii]
          Length = 225

 Score = 71.9 bits (176), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 33/111 (29%), Positives = 45/111 (40%), Gaps = 14/111 (12%)

Query: 6   VFMSCALEEAQNAALRN--EIPVGAVAVL--NNKIISRAGNRNRELKDVTAHAEILAIRM 61
            +M  A  EA  A      + P G   V   +++++    N+     +   H EI AI  
Sbjct: 39  HWMRVA-NEAVYADGHPCPQAPFGTAIVNTTSDELVCVISNKVGVTGNPAMHGEISAITH 97

Query: 62  ------GCRILSQEILPE---VDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
                      SQEIL       LY   EPC MCA+AI  A  + + YG S
Sbjct: 98  CTEVLTAQGWTSQEILAGWKDFSLYTNGEPCPMCASAIRWAGFKEVIYGTS 148


>gi|228472740|ref|ZP_04057498.1| cytidine/deoxycytidylate deaminase family protein [Capnocytophaga
           gingivalis ATCC 33624]
 gi|228275791|gb|EEK14557.1| cytidine/deoxycytidylate deaminase family protein [Capnocytophaga
           gingivalis ATCC 33624]
          Length = 150

 Score = 71.9 bits (176), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 31/116 (26%), Positives = 43/116 (37%), Gaps = 19/116 (16%)

Query: 1   MKK----GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRE---------L 47
           M+K       +M  A E A+ +  + +  VGA+ V +  IIS   N              
Sbjct: 5   MEKQERYDRAYMRMAQEWAKLSYSQRKQ-VGAIIVKDRMIISDGYNGTPTGFDNCCEDAQ 63

Query: 48  KDVTA---HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
            D      HAE  AI                LY+T+ PC  C+  I  A I R+ Y
Sbjct: 64  GDTLWYVLHAEANAILKVAASTQS--CAGATLYITMSPCRECSKLIHQAGIVRVVY 117


>gi|254519765|ref|ZP_05131821.1| deoxycytidylate deaminase [Clostridium sp. 7_2_43FAA]
 gi|226913514|gb|EEH98715.1| deoxycytidylate deaminase [Clostridium sp. 7_2_43FAA]
          Length = 164

 Score = 71.9 bits (176), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 33/122 (27%), Positives = 44/122 (36%), Gaps = 30/122 (24%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVL-NNKIISRAGN-------------- 42
           +     FM  A+   + +      P   VGA  V  +NKI+S+  N              
Sbjct: 7   ISWDEYFMGVAILAGKRSKD----PSTQVGACIVDNDNKILSQGYNGLPRGCSDDEFPWD 62

Query: 43  ---RNRELKDV-TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98
                 E K     HAE+ AI           L    +YV L PC  CA AI  A I+ +
Sbjct: 63  REGHVLETKYPYVVHAELNAILN----SRGTNLYGAKIYVALFPCNECAKAIIQAGIKEV 118

Query: 99  YY 100
            Y
Sbjct: 119 VY 120


>gi|148240028|ref|YP_001225415.1| riboflavin biosynthesis protein ribD
           (diaminohydroxyphosphoribosylaminopyrimidine deaminase /
           5-amino-6-(5-phosphoribosylamino)uracil reductase)
           [Synechococcus sp. WH 7803]
 gi|147848567|emb|CAK24118.1| Riboflavin biosynthesis protein ribD
           (Diaminohydroxyphosphoribosylaminopyrimidine deaminase /
           5-amino-6-(5-phosphoribosylamino)uracil reductase)
           [Synechococcus sp. WH 7803]
          Length = 372

 Score = 71.9 bits (176), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 27/126 (21%), Positives = 43/126 (34%), Gaps = 20/126 (15%)

Query: 26  VGAVAVLNNKI-ISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC- 83
           VGAV + ++ + +    +          HAE+          +        + VTLEPC 
Sbjct: 35  VGAVVLDSSGVLVGEGFHARAGQ----PHAEVG-----ALAQAGAAARGGTIIVTLEPCC 85

Query: 84  -----TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSR 138
                  CA A+  A I R+    ++P       G Q    A      E+  G+ E  + 
Sbjct: 86  HHGRTPPCADAVIKAGIARVVVALTDPDPRVAGGGLQRLRDAG----VEVISGVLEAEAA 141

Query: 139 QIIQDF 144
                F
Sbjct: 142 HQNLAF 147


>gi|309791156|ref|ZP_07685688.1| hypothetical protein OSCT_1639 [Oscillochloris trichoides DG6]
 gi|308226718|gb|EFO80414.1| hypothetical protein OSCT_1639 [Oscillochloris trichoides DG6]
          Length = 196

 Score = 71.9 bits (176), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 26/150 (17%), Positives = 53/150 (35%), Gaps = 13/150 (8%)

Query: 8   MSCALEEAQNAALR-NEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           M+  +  A+    +    P  A      + +++    NR       +AHAEI+A+ +   
Sbjct: 34  MAQVIRFARLNFQQQTGGPFAAGIFERDSGRLVVIGVNRVVPCHCSSAHAEIMALSLAQH 93

Query: 65  ILSQEIL-----PEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
            L    L     P   + +   PC MC  A+  + +R +    + P+   +    +    
Sbjct: 94  RLGTYDLGAAGLPTHQIVINWRPCAMCFGALLWSGVRSVVIAGAGPELEALTGFDEGPIH 153

Query: 120 ATCHH-----SPEIYPGISEQRSRQIIQDF 144
               H       E+   +    +  + Q+F
Sbjct: 154 PEWRHELERRGIELVEDVLHAEAIAVYQEF 183


>gi|75761016|ref|ZP_00741019.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase /
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Bacillus thuringiensis serovar israelensis ATCC 35646]
 gi|74491502|gb|EAO54715.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase  /
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Bacillus thuringiensis serovar israelensis ATCC 35646]
          Length = 148

 Score = 71.9 bits (176), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 23/85 (27%), Positives = 39/85 (45%), Gaps = 11/85 (12%)

Query: 3   KGNVFMSCALEEAQ-NAALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
               +M  AL+ A+  +   +  P VGAV V +  I+    +     +    HAE+ A++
Sbjct: 54  TDQEYMRIALQLAEGTSGQTSPNPMVGAVVVKDGNIVGMGAHLRAGEE----HAEVHALQ 109

Query: 61  MGCRILSQEILPEVDLYVTLEPCTM 85
           M  +        +  +YVTLEPC+ 
Sbjct: 110 MASQ-----NAKDATVYVTLEPCSH 129


>gi|85372857|ref|YP_456919.1| riboflavin-specific deaminase/reductase [Erythrobacter litoralis
           HTCC2594]
 gi|84785940|gb|ABC62122.1| riboflavin-specific deaminase/reductase [Erythrobacter litoralis
           HTCC2594]
          Length = 325

 Score = 71.9 bits (176), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 23/88 (26%), Positives = 34/88 (38%), Gaps = 16/88 (18%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC-- 83
           VG + V  +++I R   R         HAE  A+    +           +YVTLEPC  
Sbjct: 31  VGCIIVKQDRVIGRGWTRVGGR----PHAEAAALEQAGQ-----DARGATIYVTLEPCAH 81

Query: 84  -----TMCAAAISLARIRRLYYGASNPK 106
                  CA  +  AR +R+     +P 
Sbjct: 82  ESDRGPSCADLLVAARPQRVVLAEVDPD 109


>gi|302380955|ref|ZP_07269416.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Finegoldia magna ACS-171-V-Col3]
 gi|303235173|ref|ZP_07321793.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Finegoldia magna BVS033A4]
 gi|302311176|gb|EFK93196.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Finegoldia magna ACS-171-V-Col3]
 gi|302493765|gb|EFL53551.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Finegoldia magna BVS033A4]
          Length = 139

 Score = 71.9 bits (176), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 30/118 (25%), Positives = 43/118 (36%), Gaps = 21/118 (17%)

Query: 1   MKK--GNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGN--------------- 42
           M+K     FM  AL  A  +       VG V V  +N+I+S   N               
Sbjct: 1   MRKSWNEYFMDLALNVATRSTCDRAF-VGCVLVNSDNRIVSTGYNGAISGNPHCDEVGHT 59

Query: 43  RNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
                   T HAE+ A+    +      +     YVT  PC  C  ++  A I ++YY
Sbjct: 60  LRDGHCIATIHAEMNALLYCAKEGIA--VKGCICYVTHFPCLNCTKSLIQAGISKIYY 115


>gi|297588118|ref|ZP_06946762.1| competence protein ComEB [Finegoldia magna ATCC 53516]
 gi|297574807|gb|EFH93527.1| competence protein ComEB [Finegoldia magna ATCC 53516]
          Length = 139

 Score = 71.9 bits (176), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 30/118 (25%), Positives = 43/118 (36%), Gaps = 21/118 (17%)

Query: 1   MKK--GNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGN--------------- 42
           M+K     FM  AL  A  +       VG V V  +N+I+S   N               
Sbjct: 1   MRKSWNEYFMDLALNVATRSTCDRAF-VGCVLVNSDNRIVSTGYNGAISGNPHCDEVGHT 59

Query: 43  RNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
                   T HAE+ A+    +      +     YVT  PC  C  ++  A I ++YY
Sbjct: 60  LRDGHCIATIHAEMNALLYCAKEGIA--VKGCICYVTHFPCLNCTKSLIQAGISKIYY 115


>gi|219120746|ref|XP_002181105.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217407821|gb|EEC47757.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 693

 Score = 71.9 bits (176), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 37/178 (20%), Positives = 56/178 (31%), Gaps = 54/178 (30%)

Query: 2   KKGNVFMSCALEEAQNAALRNEI------P-VGAVAV-LNNKIISRAGNRNRELKDVTAH 53
           ++   +M  A+ EA+ A     +      P VGAV V  + +I+ +A +  R   D    
Sbjct: 97  RQDEEYMLSAILEAETAGGERGVASAFPKPTVGAVLVADDGRILGKARSDFR--NDAVR- 153

Query: 54  AEILAIRMGC-------RILSQE--------ILPEVDLYVTLEPC--------TMCAAAI 90
               AI                          L    LYVTLEP               I
Sbjct: 154 ---AAIAQAGLEVTPLSEWCVSWPSSEQLRKDLETSTLYVTLEPSSEREGTALPPITQLI 210

Query: 91  SLARIRRLYYGASNP------KGGGIENGTQFYTLATCHHSPEIYPG-ISEQRSRQII 141
            L  I R+  G ++P      KG    +              E+  G + E+    +I
Sbjct: 211 ELVGIPRVVIGCADPIQERHSKGAAALHSAGI----------EVRMGSVLEEECENLI 258


>gi|119356771|ref|YP_911415.1| CMP/dCMP deaminase, zinc-binding [Chlorobium phaeobacteroides DSM
           266]
 gi|119354120|gb|ABL64991.1| CMP/dCMP deaminase, zinc-binding protein [Chlorobium
           phaeobacteroides DSM 266]
          Length = 173

 Score = 71.9 bits (176), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 30/120 (25%), Positives = 43/120 (35%), Gaps = 27/120 (22%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGN---------------------- 42
             FMS A   ++ A       +GAV V +N I+S   N                      
Sbjct: 29  EYFMSVAHLISRRATCTRAH-IGAVIVRDNNILSTGYNGAPSGLPHCDETNCRIYRSTHP 87

Query: 43  --RNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
                E    T HAEI AI    +      + + D+Y+T  PC  C   +    I+ +YY
Sbjct: 88  DGTVEENCVNTIHAEINAIAQAAKHGVS--IKDADIYITASPCIHCLKVLINVGIKTIYY 145


>gi|110801506|ref|YP_698456.1| cytidine/deoxycytidylate deaminase family protein [Clostridium
           perfringens SM101]
 gi|110682007|gb|ABG85377.1| cytidine/deoxycytidylate deaminase family protein [Clostridium
           perfringens SM101]
          Length = 166

 Score = 71.9 bits (176), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 34/122 (27%), Positives = 45/122 (36%), Gaps = 30/122 (24%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVL-NNKIISRAGN-------------- 42
           +     FM  AL  A+ +      P   VGA  V  +NKI+    N              
Sbjct: 9   ISWDEYFMGVALISAKRSKD----PNTQVGACIVDNDNKIVGIGYNGFPKGCSDDDLPWG 64

Query: 43  ---RNRELKDVTA-HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98
                 E K   A HAE+ AI       + + +    +Y TL PC  CA AI  A I  +
Sbjct: 65  NKGEFLETKYPYACHAELNAILN----STGKNVKNCRVYATLFPCNECAKAIIQAGITEV 120

Query: 99  YY 100
            Y
Sbjct: 121 IY 122


>gi|224419196|ref|ZP_03657202.1| putative riboflavin-specific deaminase [Helicobacter canadensis MIT
           98-5491]
 gi|253828126|ref|ZP_04871011.1| Riboflavin biosynthesis protein RibD [Helicobacter canadensis MIT
           98-5491]
 gi|313142700|ref|ZP_07804893.1| riboflavin biosynthesis protein RibD [Helicobacter canadensis MIT
           98-5491]
 gi|253511532|gb|EES90191.1| Riboflavin biosynthesis protein RibD [Helicobacter canadensis MIT
           98-5491]
 gi|313131731|gb|EFR49348.1| riboflavin biosynthesis protein RibD [Helicobacter canadensis MIT
           98-5491]
          Length = 346

 Score = 71.9 bits (176), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 32/153 (20%), Positives = 56/153 (36%), Gaps = 36/153 (23%)

Query: 1   MKKGNVFMSCALEEAQNAALRN--EIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEIL 57
           M   N ++  A++EA     +      VGA+ +  N +I++   ++         HAE+L
Sbjct: 1   MVDDNFYLELAIKEAWKTQCQTLPNPAVGALILDHNGRILALQAHQEAGK----PHAEVL 56

Query: 58  AIRMG----------------------CRILSQEILPEVDLYVTLEPC------TMCAAA 89
           A++                         +  +  +     LYVTLEPC        CAA 
Sbjct: 57  ALKEAYFNLTQDSNILPLEQSIQIHEYLKQKAHSLFHNATLYVTLEPCMHEGKTPSCAAL 116

Query: 90  ISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
           +    I++L  G  +P       G ++     C
Sbjct: 117 LESLGIKKLIIGTKDPNPKAQG-GAEYLQQRGC 148


>gi|99081975|ref|YP_614129.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase /
           diaminohydroxyphosphoribosylaminopyrimidine deaminase
           [Ruegeria sp. TM1040]
 gi|99038255|gb|ABF64867.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase /
           diaminohydroxyphosphoribosylaminopyrimidine deaminase
           [Ruegeria sp. TM1040]
          Length = 358

 Score = 71.9 bits (176), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 28/146 (19%), Positives = 46/146 (31%), Gaps = 21/146 (14%)

Query: 8   MSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M  AL   +    R      VG V V   +++ R   +         HAE +        
Sbjct: 1   MGLALSLGRRGQGRTWPNPAVGCVIVQKGRVVGRGWTQPGGR----PHAEPM-----ALA 51

Query: 66  LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
            +         YV+LEPC        CA A+  A + R+     +        G +    
Sbjct: 52  QAGAAARGATAYVSLEPCAHHGKTPPCAQALIEAGVARVVAAIEDSDPRVSGQGFEMLRA 111

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFF 145
           A       +  G+  + +    + FF
Sbjct: 112 AG----ISVTTGVRAEEAGFDHEGFF 133


>gi|240172784|ref|ZP_04751443.1| bifunctional riboflavin biosynthesis protein RibG [Mycobacterium
           kansasii ATCC 12478]
          Length = 339

 Score = 71.9 bits (176), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 28/152 (18%), Positives = 58/152 (38%), Gaps = 24/152 (15%)

Query: 8   MSCALEEAQ--NAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           M  A++++     +     PVGAV V    +++   G +     D   HAE++       
Sbjct: 13  MRLAIDQSYLVKGSTYPNPPVGAVIVDTEGRVVGVGGTQP-TGGD---HAEVV-----AL 63

Query: 65  ILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
             +  +       VT+EPC        C  A+  AR+  + YG ++P G       +   
Sbjct: 64  RRAGGLAAGAIAVVTMEPCNHYGKTPPCVNALIEARVGTVIYGVADPNGIAGGGAGRLSA 123

Query: 119 LATCHHSPEIYPGISEQR-SRQIIQDFFKERR 149
                   ++  G+     +   ++++  ++R
Sbjct: 124 A-----GVQVRSGVLADHVAAGPLREWLHKQR 150


>gi|238878198|gb|EEQ41836.1| deoxycytidylate deaminase [Candida albicans WO-1]
          Length = 337

 Score = 71.9 bits (176), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 30/123 (24%), Positives = 43/123 (34%), Gaps = 31/123 (25%)

Query: 4   GNVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGN---RNRELKD--------- 49
            + FM  A + A  A   N  +  VG V V  N++++   N   R+    +         
Sbjct: 189 DSYFMRLA-DLA--ALRSNCMKRRVGCVIVRENRVVATGYNGTPRHLTNCNEGGCSRCNK 245

Query: 50  --------VT---AHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98
                    T    HAE  A+    R     I  E  LY    PC  C+  I  + IR +
Sbjct: 246 GQGSGASLATCLCLHAEENALLEAGR---DRIRGESVLYCNTCPCLTCSIKIVQSGIREV 302

Query: 99  YYG 101
            Y 
Sbjct: 303 VYA 305


>gi|221058419|ref|XP_002259855.1| cytidine and deoxycytidylate deaminase family [Plasmodium knowlesi
           strain H]
 gi|193809928|emb|CAQ41122.1| cytidine and deoxycytidylate deaminase family,putative [Plasmodium
           knowlesi strain H]
          Length = 245

 Score = 71.9 bits (176), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 24/78 (30%), Positives = 37/78 (47%)

Query: 69  EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEI 128
           E L +  + VT EPC MC  A+ L  IR +Y+   N + GG  +    +      +   I
Sbjct: 152 ENLRKCCIVVTCEPCIMCVYALKLMGIRNIYFCCLNERFGGCGSVLSLHKTYQDINVNYI 211

Query: 129 YPGISEQRSRQIIQDFFK 146
             G   +RS  ++Q F+K
Sbjct: 212 KSGGCTERSISLMQSFYK 229



 Score = 51.4 bits (123), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 16/63 (25%), Positives = 32/63 (50%), Gaps = 3/63 (4%)

Query: 2  KKGNVFMSCALEEAQNAA--LRNEIPVGAVAVLNN-KIISRAGNRNRELKDVTAHAEILA 58
          +    F++ ALEEA+ +      E+P+  + +    +I+S + N   E K+ + H E++ 
Sbjct: 7  EDAIHFLNIALEEAEKSLKVELKEMPIFCLLINEKREILSSSYNHTNESKNGSRHCELIT 66

Query: 59 IRM 61
          I  
Sbjct: 67 IDK 69


>gi|71904197|ref|YP_281000.1| ComE operon protein 2 [Streptococcus pyogenes MGAS6180]
 gi|251783268|ref|YP_002997573.1| ComE operon protein 2 [Streptococcus dysgalactiae subsp.
           equisimilis GGS_124]
 gi|71803292|gb|AAX72645.1| ComE operon protein 2 [Streptococcus pyogenes MGAS6180]
 gi|242391900|dbj|BAH82359.1| ComE operon protein 2 [Streptococcus dysgalactiae subsp.
           equisimilis GGS_124]
 gi|323127992|gb|ADX25289.1| ComE operon protein 2 [Streptococcus dysgalactiae subsp.
           equisimilis ATCC 12394]
          Length = 155

 Score = 71.9 bits (176), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 25/90 (27%), Positives = 37/90 (41%), Gaps = 17/90 (18%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKD---------------VTAHAEILAIRMGCRILSQEI 70
           VGAV V +N+II+   N      D                T HAE+ A+    +      
Sbjct: 29  VGAVLVKDNRIIATGYNGGVSATDNCNEAGHYMEDGHCIRTVHAEMNALIQCAKEGISTD 88

Query: 71  LPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
               ++YVT  PC  C  A+  A I+++ Y
Sbjct: 89  --GTEIYVTHFPCINCTKALLQAGIKKITY 116


>gi|68482051|ref|XP_715043.1| hypothetical protein CaO19.7243 [Candida albicans SC5314]
 gi|46436646|gb|EAK96005.1| hypothetical protein CaO19.7243 [Candida albicans SC5314]
          Length = 337

 Score = 71.9 bits (176), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 30/123 (24%), Positives = 43/123 (34%), Gaps = 31/123 (25%)

Query: 4   GNVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGN---RNRELKD--------- 49
            + FM  A + A  A   N  +  VG V V  N++++   N   R+    +         
Sbjct: 189 DSYFMRLA-DLA--ALRSNCMKRRVGCVIVRENRVVATGYNGTPRHLTNCNEGGCSRCNK 245

Query: 50  --------VT---AHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98
                    T    HAE  A+    R     I  E  LY    PC  C+  I  + IR +
Sbjct: 246 GQGSGASLATCLCLHAEENALLEAGR---DRIRGESVLYCNTCPCLTCSIKIVQSGIREV 302

Query: 99  YYG 101
            Y 
Sbjct: 303 VYA 305


>gi|311113483|ref|YP_003984705.1| riboflavin biosynthesis protein RibD [Rothia dentocariosa ATCC
           17931]
 gi|310944977|gb|ADP41271.1| riboflavin biosynthesis protein RibD [Rothia dentocariosa ATCC
           17931]
          Length = 415

 Score = 71.9 bits (176), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 33/157 (21%), Positives = 55/157 (35%), Gaps = 20/157 (12%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRM 61
             +  MS A+E A+         VGAV      +++    +R       T HAE   +  
Sbjct: 43  TDDRAMSLAIEAARQGIRGANPLVGAVITNSAGQVLHIGWHR----GAGTPHAEADVLAQ 98

Query: 62  GCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQ 115
             R      + +  +YV+LEPC        C+ AI  A I +++Y   +           
Sbjct: 99  A-RAAGT-DMSDAKMYVSLEPCNHTGKTGPCSHAIKEAGISQVFYAYPDRSAQASGGAEY 156

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFF---KERR 149
                  H     Y     + S  + + +F    E+R
Sbjct: 157 L----RSHGVVTTYMREFAEDSYALNERWFISVAEKR 189


>gi|78186601|ref|YP_374644.1| deoxycytidylate deaminase, putative [Chlorobium luteolum DSM 273]
 gi|78166503|gb|ABB23601.1| deoxycytidylate deaminase, putative [Chlorobium luteolum DSM 273]
          Length = 187

 Score = 71.9 bits (176), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 29/121 (23%), Positives = 43/121 (35%), Gaps = 27/121 (22%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGN--------------------- 42
              FMS A   ++ A       +GAV V ++ I+S   N                     
Sbjct: 36  HEYFMSVAHLISRRATCTRGH-IGAVIVRDHSILSTGYNGAPSGLPHCNETNCRIYRSTH 94

Query: 43  ---RNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLY 99
                 E    T HAEI AI    +      + + D+Y+T  PC  C   +    I+ +Y
Sbjct: 95  PDGTVEENCVNTIHAEINAIAQAAKHGVS--ISDSDIYITASPCIHCLKVLINVGIKTIY 152

Query: 100 Y 100
           Y
Sbjct: 153 Y 153


>gi|330804193|ref|XP_003290082.1| hypothetical protein DICPUDRAFT_154567 [Dictyostelium purpureum]
 gi|325079791|gb|EGC33374.1| hypothetical protein DICPUDRAFT_154567 [Dictyostelium purpureum]
          Length = 321

 Score = 71.9 bits (176), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 25/122 (20%), Positives = 46/122 (37%), Gaps = 15/122 (12%)

Query: 33  NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISL 92
           N  ++    N      ++ +H EI+AI     +    +     LY T EPC MCA+A+  
Sbjct: 89  NGTLMCTGVNM--GKPNIISHGEIVAINNCTAMHGITVFTNYTLYTTGEPCAMCASALLW 146

Query: 93  ARIRRLYYGASNPKGGG--------IENGTQFYTLATCHH-SPEIYPGISEQRSRQIIQD 143
           A  + + +G  N             +++   F         +P +  G+   ++      
Sbjct: 147 ADFKTIVWGTYNADLLCKICMSNIPMDSAYIFGRYYGLRSTAPRVIGGVLRSQADA---- 202

Query: 144 FF 145
           FF
Sbjct: 203 FF 204


>gi|317122494|ref|YP_004102497.1| CMP/dCMP deaminase zinc-binding protein [Thermaerobacter
           marianensis DSM 12885]
 gi|315592474|gb|ADU51770.1| CMP/dCMP deaminase zinc-binding protein [Thermaerobacter
           marianensis DSM 12885]
          Length = 171

 Score = 71.9 bits (176), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 30/128 (23%), Positives = 40/128 (31%), Gaps = 24/128 (18%)

Query: 4   GNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGN---------------RNR 45
              FM  A   A+ +      P   VGAV V + +I++   N                  
Sbjct: 26  DAYFMELAEVVAKRSTC----PRRHVGAVLVRDRRILATGYNGAPPGFPHCTDEGCLMQD 81

Query: 46  ELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNP 105
                T HAE  AI                LY T  PC  CA  +  A + R+ Y    P
Sbjct: 82  GHCVRTIHAEANAILQAALHGVTVR--GSTLYTTATPCLHCAKLLIGAGVVRVVYRDWYP 139

Query: 106 KGGGIENG 113
               +E  
Sbjct: 140 DPQAVEFL 147


>gi|209879740|ref|XP_002141310.1| cytidine/deoxycytidylate deaminase family protein [Cryptosporidium
           muris RN66]
 gi|209556916|gb|EEA06961.1| cytidine/deoxycytidylate deaminase family protein [Cryptosporidium
           muris RN66]
          Length = 314

 Score = 71.9 bits (176), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 26/137 (18%), Positives = 49/137 (35%), Gaps = 35/137 (25%)

Query: 27  GAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEI-------------LPE 73
           G V VLN+ +I    ++         H  I AIR     L                 L  
Sbjct: 173 GCVIVLNDIVIGYGLDKRHVSY-PWDHPAIDAIRNTSDKLKASRDVRSMGNKSPGSNLSN 231

Query: 74  ------------------VD---LYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN 112
                                   Y++ EPC  C+ A+  +RI +++Y  +N + GG+ +
Sbjct: 232 VNSILTNSYRVLLNQQYLCTSAIAYLSHEPCVSCSMALLHSRISQVFYEYTNNESGGLGS 291

Query: 113 GTQFYTLATCHHSPEIY 129
             + + + + +H   ++
Sbjct: 292 RCKLHCITSLNHHFTVF 308


>gi|294657495|ref|XP_459803.2| DEHA2E11374p [Debaryomyces hansenii CBS767]
 gi|199432736|emb|CAG88042.2| DEHA2E11374p [Debaryomyces hansenii]
          Length = 582

 Score = 71.9 bits (176), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 27/112 (24%), Positives = 43/112 (38%), Gaps = 12/112 (10%)

Query: 4   GNVFMSCALEEAQN-AALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
              +M  ALE A      + +  VGAV V N ++++   +R         HAE  A+   
Sbjct: 433 HRKYMELALEMANKCGETQTQFNVGAVLVNNGEVLATGHSRELPGN---THAEQCALEKY 489

Query: 63  CRILSQEILP-EVDLYVTLEPC-------TMCAAAISLARIRRLYYGASNPK 106
                +  +P   ++Y T+EPC         C   I    I+  + G   P 
Sbjct: 490 FEQTGKREVPAGTEIYTTMEPCSLRLSGNLPCVDRILETNIKTCFVGVVEPD 541


>gi|310796661|gb|EFQ32122.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Glomerella graminicola M1.001]
          Length = 237

 Score = 71.9 bits (176), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 23/90 (25%), Positives = 36/90 (40%), Gaps = 15/90 (16%)

Query: 26  VGAVAVLN--NKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEI----------LPE 73
            GA+ V +  ++++    N      D T H EI AI   C     +             +
Sbjct: 65  FGAIIVNHTSDEVVCEGANFR--TGDPTIHGEISAI-NACTAKVTKQGMTPTEIFAAWGD 121

Query: 74  VDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
           + +Y   E C MCA+AI  A  +   YG +
Sbjct: 122 LSIYTNAESCPMCASAIRWAGFKEYVYGTT 151


>gi|310821757|ref|YP_003954115.1| cytidine and deoxycytidylate deaminase zinc-binding
           domain-containing protein [Stigmatella aurantiaca
           DW4/3-1]
 gi|309394829|gb|ADO72288.1| Cytidine and deoxycytidylate deaminase zinc-binding domain protein
           [Stigmatella aurantiaca DW4/3-1]
          Length = 149

 Score = 71.9 bits (176), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 28/120 (23%), Positives = 43/120 (35%), Gaps = 20/120 (16%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRE---LKD----------- 49
              FM  A + A  A    +  VGA+ V +  I+S   N +       D           
Sbjct: 8   DQYFMDIARQVASRATCDRKH-VGALLVRDRTILSTGYNGSIRGLPHCDDVGHMMENGHC 66

Query: 50  -VTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG--ASNPK 106
             T HAE  AI    +      +    +Y T  PC  C   I+ +   R+ +G    +P+
Sbjct: 67  VATVHAEANAIIQAAKNGVS--IDGATIYTTASPCWPCFKLIANSGCVRIVFGEFYRDPR 124


>gi|150005156|ref|YP_001299900.1| deoxycytidylate deaminase [Bacteroides vulgatus ATCC 8482]
 gi|212694623|ref|ZP_03302751.1| hypothetical protein BACDOR_04153 [Bacteroides dorei DSM 17855]
 gi|237711112|ref|ZP_04541593.1| deoxycytidylate deaminase [Bacteroides sp. 9_1_42FAA]
 gi|237727465|ref|ZP_04557946.1| deoxycytidylate deaminase [Bacteroides sp. D4]
 gi|254883290|ref|ZP_05256000.1| deoxycytidylate deaminase [Bacteroides sp. 4_3_47FAA]
 gi|265750698|ref|ZP_06086761.1| deoxycytidylate deaminase [Bacteroides sp. 3_1_33FAA]
 gi|294777766|ref|ZP_06743212.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Bacteroides vulgatus PC510]
 gi|319642664|ref|ZP_07997310.1| deoxycytidylate deaminase [Bacteroides sp. 3_1_40A]
 gi|149933580|gb|ABR40278.1| deoxycytidylate deaminase [Bacteroides vulgatus ATCC 8482]
 gi|212663124|gb|EEB23698.1| hypothetical protein BACDOR_04153 [Bacteroides dorei DSM 17855]
 gi|229434321|gb|EEO44398.1| deoxycytidylate deaminase [Bacteroides dorei 5_1_36/D4]
 gi|229454956|gb|EEO60677.1| deoxycytidylate deaminase [Bacteroides sp. 9_1_42FAA]
 gi|254836083|gb|EET16392.1| deoxycytidylate deaminase [Bacteroides sp. 4_3_47FAA]
 gi|263237594|gb|EEZ23044.1| deoxycytidylate deaminase [Bacteroides sp. 3_1_33FAA]
 gi|294448354|gb|EFG16908.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Bacteroides vulgatus PC510]
 gi|317385752|gb|EFV66685.1| deoxycytidylate deaminase [Bacteroides sp. 3_1_40A]
          Length = 144

 Score = 71.9 bits (176), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 32/112 (28%), Positives = 44/112 (39%), Gaps = 15/112 (13%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRN--------RELKDVT- 51
           +K    ++  A   A+N+       VGA+ V +  IIS   N           +   VT 
Sbjct: 9   LKLDKRYIRMASIWAENSYCER-RQVGALIVKDKMIISDGYNGTPAGFENVCEDDNGVTK 67

Query: 52  ---AHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
               HAE  AI    R  +        +YVT  PC  CA  I  A I+R+ Y
Sbjct: 68  PYVLHAEANAITKIARSNNSSD--GATMYVTASPCIECAKLIIQAGIKRVVY 117


>gi|83593160|ref|YP_426912.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase /
           diaminohydroxyphosphoribosylaminopyrimidine deaminase
           [Rhodospirillum rubrum ATCC 11170]
 gi|83576074|gb|ABC22625.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase /
           diaminohydroxyphosphoribosylaminopyrimidine deaminase
           [Rhodospirillum rubrum ATCC 11170]
          Length = 367

 Score = 71.9 bits (176), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 32/146 (21%), Positives = 45/146 (30%), Gaps = 22/146 (15%)

Query: 8   MSCALEEAQNAALR--NEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           M  AL  A     R      VG V V    +++ R   +         HAE  A+     
Sbjct: 1   MRTALGLAARGLGRVWPNPAVGCVLVDAQGRVVGRGWTQPGGR----PHAEREALDRAGA 56

Query: 65  ILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
                       YVTLEPC        CA A+  A + R+     +P       G     
Sbjct: 57  AARGAT-----AYVTLEPCSHHGKTPPCADALIDAGVVRVVAALGDPDPRVSGRGFAQLR 111

Query: 119 LATCHHSPEIYPGISEQRSRQIIQDF 144
            A       +  G+    +R +   F
Sbjct: 112 AAG----VVVETGLLVDEARALNLGF 133


>gi|297200713|ref|ZP_06918110.1| bifunctional enzyme deaminase/reductase [Streptomyces sviceus ATCC
           29083]
 gi|197712280|gb|EDY56314.1| bifunctional enzyme deaminase/reductase [Streptomyces sviceus ATCC
           29083]
          Length = 375

 Score = 71.9 bits (176), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 35/128 (27%), Positives = 49/128 (38%), Gaps = 26/128 (20%)

Query: 4   GNVFMSCALEEA------QNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEI 56
            + +++ A E A      Q A       VGAV V  +   ++R  +R  E  D   HAE 
Sbjct: 231 DHHWLALACELATRCPPSQTAFS-----VGAVVVAADGTELARGHSR--EGDDPVVHAEE 283

Query: 57  LAIRMGCRILSQEILPEVDLYVTLEPCTM-------CAAAISLARIRRLYYGASNPK--- 106
            A+       +   L    +Y +LEPCT        CA  I  A +RR+      P    
Sbjct: 284 AAL--AKIDPADPRLATATVYTSLEPCTHRASRPAPCARLILDAGVRRVVTAWREPDTFV 341

Query: 107 GGGIENGT 114
            G    GT
Sbjct: 342 AGADGTGT 349


>gi|295425707|ref|ZP_06818394.1| deoxycytidylate deaminase [Lactobacillus amylolyticus DSM 11664]
 gi|295064723|gb|EFG55644.1| deoxycytidylate deaminase [Lactobacillus amylolyticus DSM 11664]
          Length = 160

 Score = 71.9 bits (176), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 29/111 (26%), Positives = 47/111 (42%), Gaps = 18/111 (16%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELK----DV---------- 50
             FM  AL  AQ +     + VG+V V +N+II    N +   +    DV          
Sbjct: 9   QYFMMQALVIAQRSTCNRAL-VGSVLVRDNRIIGTGYNGSISRQPHCDDVGHQMVDGHCV 67

Query: 51  -TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
            T H+E+ ++    +          ++YVT  PC  C  A+  A ++R+ Y
Sbjct: 68  RTIHSEMNSLIQCAKNGVSTD--GTEIYVTHFPCYNCTKALVQAGVKRINY 116


>gi|332005965|gb|AED93348.1| cytidine/deoxycytidylate deaminase-like protein [Arabidopsis
           thaliana]
          Length = 404

 Score = 71.5 bits (175), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 18/71 (25%), Positives = 36/71 (50%)

Query: 72  PEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPG 131
              D+++ LEPCTMCA A+   RI+R++Y   N   GG+ +  +     + +H   ++  
Sbjct: 332 TGYDIFLLLEPCTMCAMALVHQRIKRIFYAFPNTTAGGLGSVHRLQGEKSLNHHYAVFRV 391

Query: 132 ISEQRSRQIIQ 142
           +    + + + 
Sbjct: 392 LLPDDALRQMT 402


>gi|110736606|dbj|BAF00268.1| hypothetical protein [Arabidopsis thaliana]
          Length = 226

 Score = 71.5 bits (175), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 18/71 (25%), Positives = 36/71 (50%)

Query: 72  PEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPG 131
              D+++ LEPCTMCA A+   RI+R++Y   N   GG+ +  +     + +H   ++  
Sbjct: 154 TGYDIFLLLEPCTMCAMALVHQRIKRIFYAFPNTTAGGLGSVHRLQGEKSLNHHYAVFRV 213

Query: 132 ISEQRSRQIIQ 142
           +    + + + 
Sbjct: 214 LLPDDALRQMT 224


>gi|53749134|gb|AAU90052.1| At5g24670 [Arabidopsis thaliana]
 gi|55733733|gb|AAV59263.1| At5g24670 [Arabidopsis thaliana]
          Length = 400

 Score = 71.5 bits (175), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 18/71 (25%), Positives = 36/71 (50%)

Query: 72  PEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPG 131
              D+++ LEPCTMCA A+   RI+R++Y   N   GG+ +  +     + +H   ++  
Sbjct: 328 TGYDIFLLLEPCTMCAMALVHQRIKRIFYAFPNTTAGGLGSVHRLQGEKSLNHHYAVFRV 387

Query: 132 ISEQRSRQIIQ 142
           +    + + + 
Sbjct: 388 LLPDDALRQMT 398


>gi|79519581|ref|NP_197855.3| catalytic/ hydrolase/ zinc ion binding [Arabidopsis thaliana]
 gi|332005964|gb|AED93347.1| cytidine/deoxycytidylate deaminase-like protein [Arabidopsis
           thaliana]
          Length = 400

 Score = 71.5 bits (175), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 18/71 (25%), Positives = 36/71 (50%)

Query: 72  PEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPG 131
              D+++ LEPCTMCA A+   RI+R++Y   N   GG+ +  +     + +H   ++  
Sbjct: 328 TGYDIFLLLEPCTMCAMALVHQRIKRIFYAFPNTTAGGLGSVHRLQGEKSLNHHYAVFRV 387

Query: 132 ISEQRSRQIIQ 142
           +    + + + 
Sbjct: 388 LLPDDALRQMT 398


>gi|330507911|ref|YP_004384339.1| dCMP deaminase [Methanosaeta concilii GP-6]
 gi|328928719|gb|AEB68521.1| dCMP deaminase [Methanosaeta concilii GP-6]
          Length = 153

 Score = 71.5 bits (175), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 27/118 (22%), Positives = 44/118 (37%), Gaps = 24/118 (20%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGN--------------RNRELKD 49
              FM  A+  A+ +       VGA+ V N +I++   N                  ++ 
Sbjct: 10  DEYFMEIAIVVAKRSTCLRNQ-VGALFVKNKRILTTGYNGAPAGLDHCDVVGCAREGVQS 68

Query: 50  VTAH-------AEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
            T H       AE  AI      +    +    LY T +PC +CA  +  AR+ ++ Y
Sbjct: 69  GTRHELCRAVHAEQNAIIQAA--MHGISIEGATLYCTHQPCILCAKMMINARVAKVVY 124


>gi|320547474|ref|ZP_08041760.1| competence protein comEB [Streptococcus equinus ATCC 9812]
 gi|320447819|gb|EFW88576.1| competence protein comEB [Streptococcus equinus ATCC 9812]
          Length = 154

 Score = 71.5 bits (175), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 25/90 (27%), Positives = 37/90 (41%), Gaps = 17/90 (18%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKD---------------VTAHAEILAIRMGCRILSQEI 70
           VGAV V +N+II+   N      D                T HAE+ A+    +      
Sbjct: 29  VGAVLVKDNRIIATGYNGGVSETDNCSEAGHKMEDGHCIRTVHAEMNALIQCAKEGIST- 87

Query: 71  LPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
               ++YVT  PC  C  A+  A I+++ Y
Sbjct: 88  -KGTEIYVTHFPCINCTKALLQAGIKKITY 116


>gi|257437839|ref|ZP_05613594.1| putative deoxycytidylate deaminase [Faecalibacterium prausnitzii
           A2-165]
 gi|257199499|gb|EEU97783.1| putative deoxycytidylate deaminase [Faecalibacterium prausnitzii
           A2-165]
          Length = 168

 Score = 71.5 bits (175), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 34/122 (27%), Positives = 41/122 (33%), Gaps = 30/122 (24%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLN-NKIISRAGNRN-----------R 45
           +     FM  AL  A  +      P   VGA  V   NKI+S   N              
Sbjct: 16  INWDEYFMGIALLTAMRSKD----PSSQVGACIVSPENKILSLGYNGMPIGCDDDAMPWE 71

Query: 46  ELKDVTA-------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98
              D          HAE+ AI           L    +YVTL PC  CA AI  + I  +
Sbjct: 72  REGDPLDTKYMYVCHAELNAILNSAHN----NLKGARVYVTLFPCNECAKAIIQSGISEV 127

Query: 99  YY 100
            Y
Sbjct: 128 VY 129


>gi|20089035|ref|NP_615110.1| dCMP deaminase [Methanosarcina acetivorans C2A]
 gi|19913892|gb|AAM03590.1| dCMP deaminase [Methanosarcina acetivorans C2A]
          Length = 150

 Score = 71.5 bits (175), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 28/127 (22%), Positives = 46/127 (36%), Gaps = 26/127 (20%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGN----------------RNREL 47
              F+  A   A+ A       VGAV + + +I+S   N                   ++
Sbjct: 8   DEYFLEIAFAVARRATCLRSN-VGAVIMRDKRILSTGYNGAPSGLEHCLEIECIRDLEKI 66

Query: 48  KDVTA-------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
              T        HAE  AI      +    +    +Y T +PCT+CA  I  + I+++ Y
Sbjct: 67  ISGTQKEKCRAVHAEQNAIIQAA--IHGVSIAGATIYCTQQPCTLCAKMIINSNIKKVVY 124

Query: 101 GASNPKG 107
              +P  
Sbjct: 125 STPDPDT 131


>gi|311031602|ref|ZP_07709692.1| hypothetical protein Bm3-1_13811 [Bacillus sp. m3-13]
          Length = 190

 Score = 71.5 bits (175), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 28/116 (24%), Positives = 44/116 (37%), Gaps = 18/116 (15%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELK-----------D 49
           +     FM+ +   A  +     + VGA  V + +II+   N +               D
Sbjct: 5   ISWDQYFMAQSHLLALRSTCTR-LAVGATIVRDKRIIAGGYNGSIAGGVHCIDEGCYVID 63

Query: 50  ----VTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
                T HAE+ A+    +          ++YVT  PC  C  AI  A I+ +YY 
Sbjct: 64  NHCVRTIHAEMNALLQCSKFGVPT--TGAEIYVTHFPCLHCCKAIIQAGIKTVYYA 117


>gi|302384784|ref|YP_003820606.1| dCMP deaminase [Clostridium saccharolyticum WM1]
 gi|302195412|gb|ADL02983.1| dCMP deaminase [Clostridium saccharolyticum WM1]
          Length = 164

 Score = 71.5 bits (175), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 36/128 (28%), Positives = 49/128 (38%), Gaps = 33/128 (25%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVL-NNKIISRAGN-------------- 42
           +     FM  A   ++ +      P   VGA  V  +NKI+S   N              
Sbjct: 9   ITWDEYFMGVAALSSKRSKD----PSTQVGACIVSQDNKILSMGYNGFPMGCSDDEFPWD 64

Query: 43  RNRELKDV-------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARI 95
           R  E +D        + H+E+ AI           L    LYVTL PC  CA AI  A I
Sbjct: 65  RENEQEDPYNAKYFYSTHSELNAILN----YRGGSLEGSKLYVTLFPCNECAKAIIQAGI 120

Query: 96  RRLYYGAS 103
           + + YG+ 
Sbjct: 121 KTIVYGSD 128


>gi|156059474|ref|XP_001595660.1| hypothetical protein SS1G_03749 [Sclerotinia sclerotiorum 1980]
 gi|154701536|gb|EDO01275.1| hypothetical protein SS1G_03749 [Sclerotinia sclerotiorum 1980
           UF-70]
          Length = 380

 Score = 71.5 bits (175), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 40/173 (23%), Positives = 61/173 (35%), Gaps = 55/173 (31%)

Query: 5   NVFMSCALEEAQNAALRN-EIPVGAVAV--LNN--KIISRAGNRN------RELKDVTAH 53
             +M  A E A  ++       +GAV V   N   + ++ AG+            +VTAH
Sbjct: 184 QKWMDLAAEVAHLSSTAGLGEQIGAVIVERKNGVARTLALAGDARWMNWPRVGSGNVTAH 243

Query: 54  AEILAIRMGC------------------------------------------RILSQEIL 71
           A + AI M                                              +   + 
Sbjct: 244 AALRAIAMVADGIKIQEEKKAGTESEEGTSNEQMIFRDQPLDTLEAKHHKSAEWVDGYLC 303

Query: 72  PEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIE--NGTQFYTLATC 122
            E++LY+T EPC MC+ AI  +R  R+ +G   PK GG+   N    Y  A+ 
Sbjct: 304 HELELYMTHEPCVMCSMAIVHSRFGRVVFGHRMPKTGGLCADNLLDLYMPASM 356


>gi|168207992|ref|ZP_02633997.1| cytidine/deoxycytidylate deaminase family protein [Clostridium
           perfringens E str. JGS1987]
 gi|168210758|ref|ZP_02636383.1| cytidine/deoxycytidylate deaminase family protein [Clostridium
           perfringens B str. ATCC 3626]
 gi|168217464|ref|ZP_02643089.1| cytidine/deoxycytidylate deaminase family protein [Clostridium
           perfringens NCTC 8239]
 gi|169342382|ref|ZP_02863448.1| cytidine/deoxycytidylate deaminase family protein [Clostridium
           perfringens C str. JGS1495]
 gi|182626202|ref|ZP_02953960.1| cytidine/deoxycytidylate deaminase family protein [Clostridium
           perfringens D str. JGS1721]
 gi|169299502|gb|EDS81566.1| cytidine/deoxycytidylate deaminase family protein [Clostridium
           perfringens C str. JGS1495]
 gi|170660714|gb|EDT13397.1| cytidine/deoxycytidylate deaminase family protein [Clostridium
           perfringens E str. JGS1987]
 gi|170711173|gb|EDT23355.1| cytidine/deoxycytidylate deaminase family protein [Clostridium
           perfringens B str. ATCC 3626]
 gi|177908466|gb|EDT70999.1| cytidine/deoxycytidylate deaminase family protein [Clostridium
           perfringens D str. JGS1721]
 gi|182380416|gb|EDT77895.1| cytidine/deoxycytidylate deaminase family protein [Clostridium
           perfringens NCTC 8239]
          Length = 166

 Score = 71.5 bits (175), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 34/122 (27%), Positives = 45/122 (36%), Gaps = 30/122 (24%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVL-NNKIISRAGN-------------- 42
           +     FM  AL  A+ +      P   VGA  V  +NKI+    N              
Sbjct: 9   ISWDEYFMGVALISAKRSKD----PNTQVGACIVDNDNKIVGIGYNGFPKGCSDDDLPWG 64

Query: 43  ---RNRELKDVTA-HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98
                 E K   A HAE+ AI       + + +    +Y TL PC  CA AI  A I  +
Sbjct: 65  NKGDFLETKYPYACHAELNAILN----STGKNVKNCRVYATLFPCNECAKAIIQAGITEV 120

Query: 99  YY 100
            Y
Sbjct: 121 IY 122


>gi|115931277|ref|XP_001180302.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus]
          Length = 708

 Score = 71.5 bits (175), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 26/128 (20%), Positives = 51/128 (39%), Gaps = 27/128 (21%)

Query: 26  VGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS---------------- 67
           +GA+ V   ++  +    +     ++   HA +  I +                      
Sbjct: 565 IGALIVDPKSDTTLGMTSSVPGIGENSLQHAVMKCIDLVAHSQGGGAWSICPESCYESVN 624

Query: 68  --------QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
                     +    DLY+T EPC MCA A+  +RIRR++Y  S+P  G + +  + +  
Sbjct: 625 GECSTDETPYLCTGFDLYITQEPCVMCAMALVHSRIRRVFYIDSHPD-GALGSRYKLHAE 683

Query: 120 ATCHHSPE 127
           ++ +H  +
Sbjct: 684 SSLNHRYQ 691


>gi|110801187|ref|YP_695768.1| cytidine/deoxycytidylate deaminase family protein [Clostridium
           perfringens ATCC 13124]
 gi|168215286|ref|ZP_02640911.1| cytidine/deoxycytidylate deaminase family protein [Clostridium
           perfringens CPE str. F4969]
 gi|110675834|gb|ABG84821.1| cytidine/deoxycytidylate deaminase family protein [Clostridium
           perfringens ATCC 13124]
 gi|170713327|gb|EDT25509.1| cytidine/deoxycytidylate deaminase family protein [Clostridium
           perfringens CPE str. F4969]
          Length = 166

 Score = 71.5 bits (175), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 34/122 (27%), Positives = 45/122 (36%), Gaps = 30/122 (24%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVL-NNKIISRAGN-------------- 42
           +     FM  AL  A+ +      P   VGA  V  +NKI+    N              
Sbjct: 9   ISWDEYFMGVALISAKRSKD----PNTQVGACIVDNDNKIVGIGYNGFPKGCSDDDLPWG 64

Query: 43  ---RNRELKDVTA-HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98
                 E K   A HAE+ AI       + + +    +Y TL PC  CA AI  A I  +
Sbjct: 65  NKGDFLETKYPYACHAELNAILN----STGKNVKNCRVYATLFPCNECAKAIIQAGITEV 120

Query: 99  YY 100
            Y
Sbjct: 121 IY 122


>gi|18310048|ref|NP_561982.1| cytidine/deoxycytidylate deaminase family protein [Clostridium
           perfringens str. 13]
 gi|18144727|dbj|BAB80772.1| deoxycytidylate deaminase [Clostridium perfringens str. 13]
          Length = 166

 Score = 71.5 bits (175), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 34/122 (27%), Positives = 45/122 (36%), Gaps = 30/122 (24%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVL-NNKIISRAGN-------------- 42
           +     FM  AL  A+ +      P   VGA  V  +NKI+    N              
Sbjct: 9   ISWDEYFMGVALISAKRSKD----PNTQVGACIVDNDNKIVGIGYNGFPKGCSDDDLPWG 64

Query: 43  ---RNRELKDVTA-HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98
                 E K   A HAE+ AI       + + +    +Y TL PC  CA AI  A I  +
Sbjct: 65  NKGDFLETKYPYACHAELNAILN----STGKNVKNCRVYATLFPCNECAKAIIQAGITEV 120

Query: 99  YY 100
            Y
Sbjct: 121 IY 122


>gi|255947438|ref|XP_002564486.1| Pc22g04480 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211591503|emb|CAP97736.1| Pc22g04480 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 170

 Score = 71.5 bits (175), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 27/82 (32%), Positives = 32/82 (39%), Gaps = 5/82 (6%)

Query: 25  PVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83
           P  A+ +  +N+ I  + N          HAE    R          L    L  T EPC
Sbjct: 38  PFAAILLAPDNETILLSSN----SLSHVRHAESELARNAADNYDWAYLARCTLVSTWEPC 93

Query: 84  TMCAAAISLARIRRLYYGASNP 105
            MCA AI  A I RL Y AS  
Sbjct: 94  AMCAGAIYWAHIGRLVYMASEK 115


>gi|126653876|ref|ZP_01725723.1| late competence protein ComEB [Bacillus sp. B14905]
 gi|126589601|gb|EAZ83740.1| late competence protein ComEB [Bacillus sp. B14905]
          Length = 189

 Score = 71.5 bits (175), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 29/118 (24%), Positives = 43/118 (36%), Gaps = 18/118 (15%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKD----------- 49
           +     FM+ +   A  +     + VGA  V + +II+   N +    +           
Sbjct: 4   ITWDQFFMAQSHLLALRSTCTR-LAVGATVVRDKRIIAGGYNGSITGDEHCIEKGCYVVD 62

Query: 50  ----VTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
                T HAE+ A+   C           DLYVT  PC  C  +I  A I R+ Y   
Sbjct: 63  NHCVRTVHAEMNALLQ-CAKYGTPT-KGADLYVTHFPCLPCTKSIIQAGIERVCYATD 118


>gi|82791814|gb|ABB90836.1| putative bifunctional enzyme deaminase/reductase [Streptomyces
           davawensis]
          Length = 375

 Score = 71.5 bits (175), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 31/118 (26%), Positives = 44/118 (37%), Gaps = 23/118 (19%)

Query: 4   GNVFMSCALEEAQN------AALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEI 56
            + ++  A E A+       A       VGAV V  +   ++R  +R  E  D   HAE 
Sbjct: 230 DHHWLRLACELAELCPPSETAFS-----VGAVVVAADGTELARGHSR--EGTDPVVHAEE 282

Query: 57  LAIRMGCRILSQEILPEVDLYVTLEPCTM-------CAAAISLARIRRLYYGASNPKG 107
            A+           LP   +Y +LEPC         CA  I  A +RR+      P  
Sbjct: 283 AAL--AKIDPEDPRLPSATVYSSLEPCAHRSSRPAPCARLILDAGVRRVVTAWREPDT 338


>gi|323340654|ref|ZP_08080906.1| competence protein comEB [Lactobacillus ruminis ATCC 25644]
 gi|323091777|gb|EFZ34397.1| competence protein comEB [Lactobacillus ruminis ATCC 25644]
          Length = 159

 Score = 71.5 bits (175), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 29/116 (25%), Positives = 47/116 (40%), Gaps = 20/116 (17%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDV---------- 50
           +     FM  A+  +  +     + VGA+ V +N+II+   N +    DV          
Sbjct: 6   ISWNQYFMLQAILLSLRSTCTR-LAVGAILVRDNRIIAGGYNGSVS-GDVHCLDEGCYVV 63

Query: 51  ------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
                 T HAE+ A+    +  S        +YVT  PC  C   +  A I+++YY
Sbjct: 64  DGHCVRTIHAEMNAVLQCAKFGSGTD--GAVIYVTDFPCLQCTKMLLQAGIKKIYY 117


>gi|171779275|ref|ZP_02920246.1| hypothetical protein STRINF_01123 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
 gi|171282331|gb|EDT47758.1| hypothetical protein STRINF_01123 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
          Length = 154

 Score = 71.5 bits (175), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 25/90 (27%), Positives = 37/90 (41%), Gaps = 17/90 (18%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKD---------------VTAHAEILAIRMGCRILSQEI 70
           VGAV V +N+II+   N      D                T HAE+ A+    +      
Sbjct: 29  VGAVLVKDNRIIATGYNGGVSETDNCSEAGHKMEDGHCIRTVHAEMNALIQCAKEGIST- 87

Query: 71  LPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
               ++YVT  PC  C  A+  A I+++ Y
Sbjct: 88  -KGTEIYVTHFPCINCTKALLQAGIKKITY 116


>gi|261335602|emb|CBH18596.1| deaminase, putative [Trypanosoma brucei gambiense DAL972]
          Length = 365

 Score = 71.5 bits (175), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 17/64 (26%), Positives = 36/64 (56%)

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
            +  +   +D++V+ EPC MC+ A+  +R+RR++Y   NP  GG+ +    + +   +H 
Sbjct: 274 DASYLANGMDMFVSHEPCVMCSMALVHSRVRRVFYCFPNPVHGGLGSTVSIHAIQELNHH 333

Query: 126 PEIY 129
             ++
Sbjct: 334 FRVF 337


>gi|193636783|ref|XP_001945167.1| PREDICTED: deoxycytidylate deaminase-like [Acyrthosiphon pisum]
          Length = 220

 Score = 71.5 bits (175), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 26/123 (21%), Positives = 43/123 (34%), Gaps = 31/123 (25%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPV---GAVAVLNNK-IISRAGNR----------NRE 46
           +   + FM+ A   A+ +      PV   GA  V  +K I+    N              
Sbjct: 47  LSWDDFFMATAFLVAKRSKD----PVTQVGACIVTPDKKIVGTGYNGMPIGCNDDNFPWG 102

Query: 47  LKDVT---------AHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRR 97
             + +          HAE+ A+       +   +    +YV L PC  CA  I  + I+ 
Sbjct: 103 KNNPSKLENKYFYVCHAEMNAVLN----KNSMDVRNCTIYVALFPCNECAKIIIQSGIKE 158

Query: 98  LYY 100
           + Y
Sbjct: 159 VVY 161


>gi|66808325|ref|XP_637885.1| hypothetical protein DDB_G0286161 [Dictyostelium discoideum AX4]
 gi|60466312|gb|EAL64373.1| hypothetical protein DDB_G0286161 [Dictyostelium discoideum AX4]
          Length = 422

 Score = 71.5 bits (175), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 23/104 (22%), Positives = 50/104 (48%), Gaps = 8/104 (7%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAI 59
           ++K  +FM  ALE A  + ++      ++ V  +++++          ++   H+E++AI
Sbjct: 65  LEKHEMFMKIALEIAIKSKVK----FVSIIVSPDDRVLCSG---IFSKENAILHSELVAI 117

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
                           +Y T EP ++ ++AI  AR +++ YG+S
Sbjct: 118 TNCSSSHKMVTFENHTIYSTAEPDSLSSSAIVWARFKQVVYGSS 161


>gi|158286349|ref|XP_308696.4| AGAP007066-PA [Anopheles gambiae str. PEST]
 gi|157020426|gb|EAA03932.5| AGAP007066-PA [Anopheles gambiae str. PEST]
          Length = 380

 Score = 71.5 bits (175), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 17/66 (25%), Positives = 33/66 (50%)

Query: 64  RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123
                 +    D+Y+T EPC MCA A+  +R+RR+++    P  G +    + + +   +
Sbjct: 312 AKYGPYLCTGYDVYLTHEPCIMCAMALVHSRVRRVFFHRPTPGRGALGTLMKLHAVKELN 371

Query: 124 HSPEIY 129
           H  E++
Sbjct: 372 HHYEVF 377


>gi|149239664|ref|XP_001525708.1| deoxycytidylate deaminase [Lodderomyces elongisporus NRRL YB-4239]
 gi|146451201|gb|EDK45457.1| deoxycytidylate deaminase [Lodderomyces elongisporus NRRL YB-4239]
          Length = 339

 Score = 71.5 bits (175), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 30/123 (24%), Positives = 43/123 (34%), Gaps = 31/123 (25%)

Query: 4   GNVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGN---------------RNRE 46
            + FM  A + A  A   N  +  VG V V  N++++   N               R  +
Sbjct: 191 DSYFMRLA-DLA--ALRSNCMKRRVGCVIVRENRVVATGYNGTPRHLLNCNEGGCSRCNQ 247

Query: 47  LKDVTA--------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98
            +   A        HAE  A+    R     I  E  LY    PC  C+  I  + IR +
Sbjct: 248 GQGSGANLSTCLCLHAEENALLEAGR---DRIRDESVLYCNTCPCLTCSIKIVQSGIREV 304

Query: 99  YYG 101
            Y 
Sbjct: 305 VYA 307


>gi|194336940|ref|YP_002018734.1| CMP/dCMP deaminase zinc-binding [Pelodictyon phaeoclathratiforme
           BU-1]
 gi|194309417|gb|ACF44117.1| CMP/dCMP deaminase zinc-binding [Pelodictyon phaeoclathratiforme
           BU-1]
          Length = 177

 Score = 71.5 bits (175), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 30/120 (25%), Positives = 42/120 (35%), Gaps = 27/120 (22%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGN---------------------- 42
             FMS A   ++ A       +GAV V  N I+S   N                      
Sbjct: 30  EYFMSVAHLISRRATCTRGH-IGAVIVRENSILSTGYNGAPSGLPHCNESNCRIYRSIHP 88

Query: 43  --RNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
                E    T HAEI AI    +      + + D+Y+T  PC  C   +    I+ +YY
Sbjct: 89  DGTVEENCVNTIHAEINAIAQAAKHGVS--IKDSDIYITASPCIHCLKVLINVGIKTIYY 146


>gi|21227525|ref|NP_633447.1| dCMP deaminase [Methanosarcina mazei Go1]
 gi|20905903|gb|AAM31119.1| dCMP deaminase [Methanosarcina mazei Go1]
          Length = 153

 Score = 71.5 bits (175), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 29/127 (22%), Positives = 42/127 (33%), Gaps = 26/127 (20%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNR--------------NRELKD 49
              F+  A    + A       VGAV V + +I+S   N                   K 
Sbjct: 8   DEYFLEIAYVVGKRATCLRNN-VGAVIVRDKRILSTGYNGAPSGMEHCLDVGCIRELEKI 66

Query: 50  VTA---------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
            +          HAE  AI      L    +    +Y T +PC +CA  I  + I+R+ Y
Sbjct: 67  PSGTRHEKCRAVHAEQNAIIQAA--LHGVSIAGATIYCTHQPCILCAKMIINSNIKRVVY 124

Query: 101 GASNPKG 107
               P  
Sbjct: 125 SIPYPDT 131


>gi|289550640|ref|YP_003471544.1| dCMP deaminase ; Late competence protein ComEB [Staphylococcus
           lugdunensis HKU09-01]
 gi|315658135|ref|ZP_07911007.1| ComE operon protein comEB [Staphylococcus lugdunensis M23590]
 gi|289180172|gb|ADC87417.1| dCMP deaminase ; Late competence protein ComEB [Staphylococcus
           lugdunensis HKU09-01]
 gi|315496464|gb|EFU84787.1| ComE operon protein comEB [Staphylococcus lugdunensis M23590]
          Length = 153

 Score = 71.5 bits (175), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 28/116 (24%), Positives = 44/116 (37%), Gaps = 18/116 (15%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRE-------------- 46
           +K    FM+ +   A  +  +  + VGA  V +N+II+   N +                
Sbjct: 4   IKWEEYFMAQSHLLALRSTCQR-LSVGATIVKDNRIIAGGYNGSVAGEVHCIDEGCLIED 62

Query: 47  -LKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
                T HAE+ A+    +           +YVT  PC  C  +I  A I  +YY 
Sbjct: 63  GHCIRTIHAEMNALLQCAKQGVST--EGATIYVTHFPCLNCTKSIIQAGITTIYYA 116


>gi|311746929|ref|ZP_07720714.1| cytidine/deoxycytidylate deaminase family protein [Algoriphagus sp.
           PR1]
 gi|126578621|gb|EAZ82785.1| cytidine/deoxycytidylate deaminase family protein [Algoriphagus sp.
           PR1]
          Length = 160

 Score = 71.5 bits (175), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 36/143 (25%), Positives = 52/143 (36%), Gaps = 28/143 (19%)

Query: 1   MKK---GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGN--------------- 42
           M+K    ++FM  A+  A+ +    +  VGAV     +IIS   N               
Sbjct: 1   MEKPDFDDIFMELAVNLAKRSHCIKKH-VGAVLTKETRIISIGYNGPPAGTHNCDDEFPE 59

Query: 43  ---RNRELKDVTA--HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRR 97
                      +   HAE  AI     + +   +    LYVTL PC  CA  I    I +
Sbjct: 60  NGCARDSKGSCSLALHAEQNAILYA--VKNNTSVEGSTLYVTLAPCLACARIIFSMGISK 117

Query: 98  LYY--GASNPKGGGIENGTQFYT 118
           + Y    +  KG G + G  F  
Sbjct: 118 VVYLFSYAEYKGIGTDEGVDFLR 140


>gi|194017722|ref|ZP_03056332.1| ComE operon protein 2 [Bacillus pumilus ATCC 7061]
 gi|194010622|gb|EDW20194.1| ComE operon protein 2 [Bacillus pumilus ATCC 7061]
          Length = 189

 Score = 71.5 bits (175), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 31/117 (26%), Positives = 47/117 (40%), Gaps = 20/117 (17%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDV---------- 50
           +     FM+ +   A  +     + VGA  V + +II+   N +    DV          
Sbjct: 4   ISWNQYFMAQSHLLALRSTCER-LAVGATIVRDKRIIAGGYNGSIA-GDVHCADVGCYVI 61

Query: 51  ------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
                 T HAE+ AI    +  +     + ++YVT  PC  C  AI  A IR +YY 
Sbjct: 62  DHHCVRTIHAEMNAILQCAKFGAPT--ADAEIYVTHFPCLQCCKAIIQAGIRTVYYA 116


>gi|74026040|ref|XP_829586.1| deaminase [Trypanosoma brucei TREU927]
 gi|70834972|gb|EAN80474.1| deaminase, putative [Trypanosoma brucei]
          Length = 365

 Score = 71.5 bits (175), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 17/64 (26%), Positives = 36/64 (56%)

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
            +  +   +D++V+ EPC MC+ A+  +R+RR++Y   NP  GG+ +    + +   +H 
Sbjct: 274 DASYLANGMDMFVSHEPCVMCSMALVHSRVRRVFYCFPNPVHGGLGSTVSIHAIQELNHH 333

Query: 126 PEIY 129
             ++
Sbjct: 334 FRVF 337


>gi|58336551|ref|YP_193136.1| dCMP deaminase [Lactobacillus acidophilus NCFM]
 gi|227903102|ref|ZP_04020907.1| competence protein ComEB [Lactobacillus acidophilus ATCC 4796]
 gi|58253868|gb|AAV42105.1| DCMP deaminase [Lactobacillus acidophilus NCFM]
 gi|227869088|gb|EEJ76509.1| competence protein ComEB [Lactobacillus acidophilus ATCC 4796]
          Length = 159

 Score = 71.5 bits (175), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 29/111 (26%), Positives = 46/111 (41%), Gaps = 18/111 (16%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELK-----------DV--- 50
             FM  AL  AQ +     + VG+V V +N+II    N +   +           D    
Sbjct: 9   QYFMMQALVIAQRSTCNRAL-VGSVLVKDNRIIGTGYNGSVSGQPHCDEVGHQMVDGHCV 67

Query: 51  -TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
            T H+E+ AI    +          ++YVT  PC  C  ++  A I+++ Y
Sbjct: 68  RTIHSEMNAIIQCAKFGVSTD--GTEIYVTHFPCYNCCKSLLQAGIKKINY 116


>gi|294055974|ref|YP_003549632.1| CMP/dCMP deaminase zinc-binding protein [Coraliomargarita
           akajimensis DSM 45221]
 gi|293615307|gb|ADE55462.1| CMP/dCMP deaminase zinc-binding protein [Coraliomargarita
           akajimensis DSM 45221]
          Length = 169

 Score = 71.1 bits (174), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 31/112 (27%), Positives = 43/112 (38%), Gaps = 18/112 (16%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNK----IISRAGN----------RNRELK- 48
              FM+ AL  A  ++      VG V V   +    II+   N          R R+   
Sbjct: 37  DAYFMATALLMASRSSCERLH-VGCVIVSGGRQKNRIIAAGYNGFLPGSPHQSRVRDGHE 95

Query: 49  DVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
             T HAE  AI    R      L    +Y+T  PC  CA  ++ A + R+ Y
Sbjct: 96  QATVHAEQNAIADAARRGVS--LEGATVYITHYPCINCAKILASAGVARIKY 145


>gi|269121089|ref|YP_003309266.1| CMP/dCMP deaminase zinc-binding protein [Sebaldella termitidis ATCC
           33386]
 gi|268614967|gb|ACZ09335.1| CMP/dCMP deaminase zinc-binding protein [Sebaldella termitidis ATCC
           33386]
          Length = 164

 Score = 71.1 bits (174), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 30/122 (24%), Positives = 45/122 (36%), Gaps = 31/122 (25%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNK-IISRAGN---RNRELKDVTA- 52
           +     FM  AL   + +      P   VGA  +  +K I+    N         ++   
Sbjct: 8   ISWNEYFMGLALLSGKRSKD----PTTQVGACIIDEDKKIVGIGYNGFPLGSSDDNMPWG 63

Query: 53  --------------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98
                         HAE+ AI     + S + L    +YVT  PC  CA AI  ++I R+
Sbjct: 64  KQGDFLETKYPYVVHAELNAI-----LNSIKSLKGCTVYVTHFPCNECAKAIVQSKISRV 118

Query: 99  YY 100
            Y
Sbjct: 119 IY 120


>gi|330718204|ref|ZP_08312804.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase /
           diaminohydroxyphosphoribosylaminopyrimidine deaminase
           [Leuconostoc fallax KCTC 3537]
          Length = 346

 Score = 71.1 bits (174), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 37/162 (22%), Positives = 64/162 (39%), Gaps = 32/162 (19%)

Query: 3   KGNVFMSCALEEAQNAALRN-----EIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56
                M+ A    + AA  N     E P VGAV V +N +++   +     +    HAE+
Sbjct: 2   NDLTLMALA---GKTAAQANKDLTFENPRVGAVIVKDNVVLATGYHHQFGQE----HAEM 54

Query: 57  LAIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGI 110
                   +     + +  +YVTLEPC+       CA +++   +RR+  G+ +P     
Sbjct: 55  NTFHQ---LKDPAQVIDATMYVTLEPCSTHGKVGSCAQSMAKWGLRRVVIGSIDPNPSTN 111

Query: 111 ENGTQFYTLATCHHSPEIYPGISEQR-SRQIIQDF---FKER 148
            +G      A       I   +     SR++  +F   F+ R
Sbjct: 112 GHGVAILKQAG------IQVDVLNTEHSRRLNPEFHYYFEHR 147


>gi|324503290|gb|ADY41431.1| Deoxycytidylate deaminase [Ascaris suum]
          Length = 284

 Score = 71.1 bits (174), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 33/119 (27%), Positives = 41/119 (34%), Gaps = 31/119 (26%)

Query: 5   NVFMSCALEEAQNAALRNEIPV---GAVAVLNN-KIISRAGN------------------ 42
             FM+ A   AQ +      PV   GAV V  + KII    N                  
Sbjct: 113 EYFMAVACLAAQRSKD----PVTQVGAVIVNPDLKIIGSGYNGMPNGCSDDVMPWGKDSD 168

Query: 43  RNRELKDV-TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
              E K     HAE+ AI       + E +    +Y  L PC  CA  I  A I  + Y
Sbjct: 169 NPLETKYPFVCHAEMNAILN----RNCESVKGSTIYTVLFPCNECAKLIIQAGISEVVY 223


>gi|88801568|ref|ZP_01117096.1| deoxycytidylate deaminase [Polaribacter irgensii 23-P]
 gi|88782226|gb|EAR13403.1| deoxycytidylate deaminase [Polaribacter irgensii 23-P]
          Length = 141

 Score = 71.1 bits (174), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 34/121 (28%), Positives = 48/121 (39%), Gaps = 16/121 (13%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRN-----RELKDVTA--- 52
           +K    ++  ALE  + +  + +  VGA+ V N  IIS   N          +D +    
Sbjct: 7   LKYDRAYLKMALEWGKLSHCKRKQ-VGALIVKNRMIISDGFNGTPTGFENCCEDSSGNTK 65

Query: 53  ----HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG-ASNPKG 107
               HAE  AI                LY+TL PCT C+  I  A I+R+ Y  A     
Sbjct: 66  WEVLHAEANAILKVASSTQSA--EGATLYITLSPCTQCSKLIHQAGIKRVVYANAYKDDA 123

Query: 108 G 108
           G
Sbjct: 124 G 124


>gi|302875602|ref|YP_003844235.1| CMP/dCMP deaminase zinc-binding [Clostridium cellulovorans 743B]
 gi|307690132|ref|ZP_07632578.1| CMP/dCMP deaminase zinc-binding protein [Clostridium cellulovorans
           743B]
 gi|302578459|gb|ADL52471.1| CMP/dCMP deaminase zinc-binding [Clostridium cellulovorans 743B]
          Length = 156

 Score = 71.1 bits (174), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 30/115 (26%), Positives = 43/115 (37%), Gaps = 22/115 (19%)

Query: 4   GNVFMSCALEEAQNAA-LRNEIPVGAVAV-LNNKIISRAGN----------------RNR 45
              FM+ A   A+ +   R    VGAV V   N+I++   N                   
Sbjct: 22  NEYFMNLAKLAAERSTCDRAN--VGAVIVNSENRIVATGYNGSVGSKTPHCDDIGHVMRE 79

Query: 46  ELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
                T HAEI  +   C      +     +YVT  PC  C  A+  A I+++YY
Sbjct: 80  NHCIATQHAEINCLCY-CAKEGIPV-KNSVIYVTHFPCLNCTKALIQAGIKKIYY 132


>gi|224476697|ref|YP_002634303.1| putative deaminase [Staphylococcus carnosus subsp. carnosus TM300]
 gi|222421304|emb|CAL28118.1| putative deaminase similar to ComEB [Staphylococcus carnosus subsp.
           carnosus TM300]
          Length = 153

 Score = 71.1 bits (174), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 25/91 (27%), Positives = 36/91 (39%), Gaps = 17/91 (18%)

Query: 26  VGAVAVLNNKIISRAGNRNRE---------------LKDVTAHAEILAIRMGCRILSQEI 70
           VGA  V +N+II+   N +                     T HAE+ A+    +      
Sbjct: 28  VGATIVKDNRIIAGGYNGSVAGEVHCIDEGCLMEDNHCIRTIHAEMNALLQCTKQGVST- 86

Query: 71  LPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
                +YVT  PC  C  +I  A I+R+YY 
Sbjct: 87  -EGATIYVTHFPCLNCTKSIIQAGIKRIYYA 116


>gi|224541417|ref|ZP_03681956.1| hypothetical protein CATMIT_00579 [Catenibacterium mitsuokai DSM
           15897]
 gi|224525663|gb|EEF94768.1| hypothetical protein CATMIT_00579 [Catenibacterium mitsuokai DSM
           15897]
          Length = 159

 Score = 71.1 bits (174), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 35/135 (25%), Positives = 51/135 (37%), Gaps = 34/135 (25%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVL-NNKIISRAGN-------------- 42
           +     FM  A   A  +      P   VGA  V  +N+I+    N              
Sbjct: 6   ITWDQYFMGVAKLSAYRSKD----PNTQVGACIVNNDNRIVGVGYNGLPRGCEDDKFPWS 61

Query: 43  -RNRELKDV----TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRR 97
            R   L D       HAE+ AI     + S + L +  +YV+L PC  C  AI  + I+ 
Sbjct: 62  VREGALYDTKYPYVVHAELNAI-----LNSTQKLQDCRIYVSLFPCHECTKAIIQSGIKE 116

Query: 98  LYYGASNPKGGGIEN 112
           + Y   + K  G E+
Sbjct: 117 IVY--EDEKYKGSES 129


>gi|157693059|ref|YP_001487521.1| dCMP deaminase [Bacillus pumilus SAFR-032]
 gi|157681817|gb|ABV62961.1| dCMP deaminase [Bacillus pumilus SAFR-032]
          Length = 189

 Score = 71.1 bits (174), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 31/117 (26%), Positives = 47/117 (40%), Gaps = 20/117 (17%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDV---------- 50
           +     FM+ +   A  +     + VGA  V + +II+   N +    DV          
Sbjct: 4   ISWNQYFMAQSHLLALRSTCER-LAVGATIVRDKRIIAGGYNGSIA-GDVHCADVGCYVI 61

Query: 51  ------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
                 T HAE+ AI    +  +     + ++YVT  PC  C  AI  A IR +YY 
Sbjct: 62  DHHCVRTIHAEMNAILQCAKFGAPT--ADAEIYVTHFPCLQCCKAIIQAGIRTVYYA 116


>gi|33598380|ref|NP_886023.1| putative riboflavin-specific deaminase [Bordetella parapertussis
           12822]
 gi|33574509|emb|CAE39154.1| putative riboflavin-specific deaminase [Bordetella parapertussis]
          Length = 386

 Score = 71.1 bits (174), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 30/151 (19%), Positives = 51/151 (33%), Gaps = 18/151 (11%)

Query: 2   KKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
                +M  AL  A++        P VG V V + +++     +         HAE+ A+
Sbjct: 7   TDDVSWMRRALALARSVMYSTAPNPRVGCVIVRDGQVLGEGATQPPGG----PHAEVCAL 62

Query: 60  RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113
           R      +   L    +YVTLEPC        C  A++ A   R+     +P       G
Sbjct: 63  REAAARGAS--LAGATVYVTLEPCSHFGRTPPCVDALAAAAPARVVVAMGDPNPRVNGQG 120

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
                 A       +   +    + ++   F
Sbjct: 121 LARLRAAG----IAVTEDVCRDEALELNAGF 147


>gi|145628121|ref|ZP_01783922.1| formamidopyrimidine-DNA glycosylase [Haemophilus influenzae
           22.1-21]
 gi|144979896|gb|EDJ89555.1| formamidopyrimidine-DNA glycosylase [Haemophilus influenzae
           22.1-21]
          Length = 339

 Score = 71.1 bits (174), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 24/124 (19%), Positives = 43/124 (34%), Gaps = 19/124 (15%)

Query: 32  LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC------TM 85
            N +I+    +   +      HAE +A+         E       YVTLEPC        
Sbjct: 5   KNGEIVGEGFH--FKAGQP--HAERVALAQAG-----ENAKGATAYVTLEPCSHYGRTPP 55

Query: 86  CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
           CA  +  A + ++     +P       G +  + A    +      +   ++ +I + F 
Sbjct: 56  CALGLIEAGVVKVIAAMQDPNPQVAGKGLKMLSDAGIESAVN----LLNDQAEKINKGFL 111

Query: 146 KERR 149
           K  R
Sbjct: 112 KRMR 115


>gi|126652716|ref|XP_001388375.1| hypothetical protein [Cryptosporidium parvum Iowa II]
 gi|126117468|gb|EAZ51568.1| hypothetical protein cgd7_1470 [Cryptosporidium parvum Iowa II]
          Length = 344

 Score = 71.1 bits (174), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 25/181 (13%), Positives = 58/181 (32%), Gaps = 57/181 (31%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           + F+  A +  + A      P G V  L  KI++   +          H+ + A+    +
Sbjct: 160 DKFVKLACKVGEFAQSIGNPPRGCVITLKGKIVAIGEDNRNSDY-PWMHSVMKAVDNFSK 218

Query: 65  ILSQE---------------------------------------------ILPEVDL--- 76
            +                                                IL + +L   
Sbjct: 219 RVCSSSLSMPKMTNLLDSKIQDENQGSQNNEDHKDHLIEIKSKYNISEDQILSDSELKDQ 278

Query: 77  --------YVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEI 128
                   Y++ EPC  C+ A+  +RI +++Y   + + G + +  + + ++  +H   +
Sbjct: 279 YLCTNGIAYLSHEPCISCSMALVHSRISKVFYMHKDKERGFLGSNHKLHCVSELNHHYRV 338

Query: 129 Y 129
           +
Sbjct: 339 F 339


>gi|321478485|gb|EFX89442.1| hypothetical protein DAPPUDRAFT_190827 [Daphnia pulex]
          Length = 217

 Score = 71.1 bits (174), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 30/119 (25%), Positives = 39/119 (32%), Gaps = 31/119 (26%)

Query: 5   NVFMSCALEEAQNAALRNEIP---VGAVAVL-NNKIISRAGNRN---------------- 44
             FM+ A   A  +      P   VGA     NN+I+    N                  
Sbjct: 59  EYFMAVAFLAAMRSKD----PCTQVGACITDSNNRIVGVGYNGMPIGCSDEILPWGKNSS 114

Query: 45  ---RELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
                      HAE+ AI       +   L    LYV L PC  CA  I  A I+++ Y
Sbjct: 115 QPLETKYMYVCHAEMNAIMN----KNTADLRGCTLYVALFPCNECAKLIIQAGIKQVVY 169


>gi|325292542|ref|YP_004278406.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
           5-amino-6-5-phosphoribosylamino uracil reductase
           [Agrobacterium sp. H13-3]
 gi|325060395|gb|ADY64086.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
           5-amino-6-5-phosphoribosylamino uracil reductase
           [Agrobacterium sp. H13-3]
          Length = 413

 Score = 71.1 bits (174), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 33/147 (22%), Positives = 52/147 (35%), Gaps = 21/147 (14%)

Query: 3   KGNVFMSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
               FM+ A+E +     + E  P VG V V + KII+ A            HAE  A+ 
Sbjct: 6   DDEKFMARAIEVSLRHQGQTETNPSVGCVLVKDRKIIAEA----VTAIGGRPHAERQALE 61

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
           +               YVTLEPC        CA A+    + R+     +P       G 
Sbjct: 62  IAGEAA-----RGATAYVTLEPCSHWGKTPPCANALVEYGVARVVVAVDDPDERVSGRGY 116

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQII 141
                A       +  G+  ++ ++ +
Sbjct: 117 SILREAG----IVVETGLLREQGKRAL 139


>gi|228469636|ref|ZP_04054616.1| cytidine/deoxycytidylate deaminase family protein [Porphyromonas
           uenonis 60-3]
 gi|228308829|gb|EEK17530.1| cytidine/deoxycytidylate deaminase family protein [Porphyromonas
           uenonis 60-3]
          Length = 162

 Score = 71.1 bits (174), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 31/110 (28%), Positives = 45/110 (40%), Gaps = 15/110 (13%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRN--------RELKDVT---- 51
              ++  A   A+N+  +    VGA+ V N  IIS   N           + + +T    
Sbjct: 20  DRRYLRMARIWAENSYCQR-RQVGALIVHNQMIISDGYNGTPSGFENVCEDDEGITKPYV 78

Query: 52  AHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
            HAE  AI       +        +Y+T  PC  CA  I  +RIRR+ YG
Sbjct: 79  LHAEANAITKVAASGNN--CTGATIYITASPCLECAKLIIQSRIRRVVYG 126


>gi|313894545|ref|ZP_07828109.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Veillonella sp. oral taxon 158 str. F0412]
 gi|313440941|gb|EFR59369.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Veillonella sp. oral taxon 158 str. F0412]
          Length = 159

 Score = 71.1 bits (174), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 35/121 (28%), Positives = 46/121 (38%), Gaps = 29/121 (23%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVL-NNKIISRAGN---RNRELKDVTA- 52
           +     FM  A+  AQ +      P   VGA  V  +NKI+S   N    N    D T  
Sbjct: 8   ISWDEYFMGVAILAAQRSKD----PNTQVGACIVSNDNKILSIGYNGMPLNCSDDDFTWE 63

Query: 53  -------------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLY 99
                        H+E+ AI           L    +YVTL PC  CA AI  + I+ + 
Sbjct: 64  RDTADDNKYFYTVHSELNAILN----YRGGSLEGSKIYVTLFPCNECAKAIIQSGIKAVI 119

Query: 100 Y 100
           Y
Sbjct: 120 Y 120


>gi|303231464|ref|ZP_07318195.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Veillonella atypica ACS-049-V-Sch6]
 gi|302513901|gb|EFL55912.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Veillonella atypica ACS-049-V-Sch6]
          Length = 159

 Score = 71.1 bits (174), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 35/121 (28%), Positives = 46/121 (38%), Gaps = 29/121 (23%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVL-NNKIISRAGN---RNRELKDVTA- 52
           +     FM  A+  AQ +      P   VGA  V  +NKI+S   N    N    D T  
Sbjct: 8   ISWDEYFMGVAILAAQRSKD----PNTQVGACIVSNDNKILSIGYNGMPLNCSDDDFTWE 63

Query: 53  -------------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLY 99
                        H+E+ AI           L    +YVTL PC  CA AI  + I+ + 
Sbjct: 64  RDTADDNKYFYTVHSELNAILN----YRGGSLEGSKIYVTLFPCNECAKAIIQSGIKAVI 119

Query: 100 Y 100
           Y
Sbjct: 120 Y 120


>gi|282850251|ref|ZP_06259630.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Veillonella parvula ATCC 17745]
 gi|282579744|gb|EFB85148.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Veillonella parvula ATCC 17745]
          Length = 159

 Score = 71.1 bits (174), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 35/121 (28%), Positives = 46/121 (38%), Gaps = 29/121 (23%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVL-NNKIISRAGN---RNRELKDVTA- 52
           +     FM  A+  AQ +      P   VGA  V  +NKI+S   N    N    D T  
Sbjct: 8   ISWDEYFMGVAILAAQRSKD----PNTQVGACIVSNDNKILSIGYNGMPLNCSDDDFTWE 63

Query: 53  -------------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLY 99
                        H+E+ AI           L    +YVTL PC  CA AI  + I+ + 
Sbjct: 64  RDTADDNKYFYTVHSELNAILN----YRGGSLEGSKIYVTLFPCNECAKAIIQSGIKAVI 119

Query: 100 Y 100
           Y
Sbjct: 120 Y 120


>gi|256786427|ref|ZP_05524858.1| bifunctional enzyme deaminase/reductase [Streptomyces lividans
           TK24]
 gi|289770318|ref|ZP_06529696.1| bifunctional enzyme deaminase/reductase [Streptomyces lividans
           TK24]
 gi|289700517|gb|EFD67946.1| bifunctional enzyme deaminase/reductase [Streptomyces lividans
           TK24]
          Length = 376

 Score = 71.1 bits (174), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 33/127 (25%), Positives = 47/127 (37%), Gaps = 26/127 (20%)

Query: 4   GNVFMSCALEEAQN------AALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEI 56
              +++ A E A+       A       VGAV V  +   ++R  +R  E  D   HAE 
Sbjct: 231 DRHWLALACELAELCPPSDTAFS-----VGAVVVAADGSELARGHSR--EGGDPVVHAEE 283

Query: 57  LAIRMGCRILSQEILPEVDLYVTLEPC-------TMCAAAISLARIRRLYYGASNPK--- 106
            A+           LP   +Y +LEPC         CA  I  A +RR+      P    
Sbjct: 284 AAL--AKVDPEDPRLPGATVYSSLEPCARRASRPAPCARLILDAGVRRVVTAWREPDTFV 341

Query: 107 GGGIENG 113
            G   +G
Sbjct: 342 AGADGSG 348


>gi|238019264|ref|ZP_04599690.1| hypothetical protein VEIDISOL_01128 [Veillonella dispar ATCC 17748]
 gi|237863963|gb|EEP65253.1| hypothetical protein VEIDISOL_01128 [Veillonella dispar ATCC 17748]
          Length = 159

 Score = 71.1 bits (174), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 35/121 (28%), Positives = 46/121 (38%), Gaps = 29/121 (23%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVL-NNKIISRAGN---RNRELKDVTA- 52
           +     FM  A+  AQ +      P   VGA  V  +NKI+S   N    N    D T  
Sbjct: 8   ISWDEYFMGVAILAAQRSKD----PNTQVGACIVSNDNKILSIGYNGMPLNCSDDDFTWE 63

Query: 53  -------------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLY 99
                        H+E+ AI           L    +YVTL PC  CA AI  + I+ + 
Sbjct: 64  RDSADDNKYFYTVHSELNAILN----YRGGSLEGSKIYVTLFPCNECAKAIIQSGIKAVI 119

Query: 100 Y 100
           Y
Sbjct: 120 Y 120


>gi|269798024|ref|YP_003311924.1| CMP/dCMP deaminase zinc-binding protein [Veillonella parvula DSM
           2008]
 gi|294791904|ref|ZP_06757052.1| deoxycytidylate deaminase (dCMP deaminase) [Veillonella sp. 6_1_27]
 gi|269094653|gb|ACZ24644.1| CMP/dCMP deaminase zinc-binding protein [Veillonella parvula DSM
           2008]
 gi|294457134|gb|EFG25496.1| deoxycytidylate deaminase (dCMP deaminase) [Veillonella sp. 6_1_27]
          Length = 159

 Score = 71.1 bits (174), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 35/121 (28%), Positives = 46/121 (38%), Gaps = 29/121 (23%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVL-NNKIISRAGN---RNRELKDVTA- 52
           +     FM  A+  AQ +      P   VGA  V  +NKI+S   N    N    D T  
Sbjct: 8   ISWDEYFMGVAILAAQRSKD----PNTQVGACIVSNDNKILSIGYNGMPLNCSDDDFTWE 63

Query: 53  -------------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLY 99
                        H+E+ AI           L    +YVTL PC  CA AI  + I+ + 
Sbjct: 64  RDTADDNKYFYTVHSELNAILN----YRGGSLEGSKIYVTLFPCNECAKAIIQSGIKAVI 119

Query: 100 Y 100
           Y
Sbjct: 120 Y 120


>gi|21222507|ref|NP_628286.1| bifunctional enzyme deaminase/reductase [Streptomyces coelicolor
           A3(2)]
 gi|5918510|emb|CAB56387.1| putative bifunctional enzyme deaminase/reductase [Streptomyces
           coelicolor A3(2)]
          Length = 376

 Score = 71.1 bits (174), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 33/127 (25%), Positives = 47/127 (37%), Gaps = 26/127 (20%)

Query: 4   GNVFMSCALEEAQN------AALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEI 56
              +++ A E A+       A       VGAV V  +   ++R  +R  E  D   HAE 
Sbjct: 231 DRHWLALACELAELCPPSDTAFS-----VGAVVVAADGSELARGHSR--EGGDPVVHAEE 283

Query: 57  LAIRMGCRILSQEILPEVDLYVTLEPC-------TMCAAAISLARIRRLYYGASNPK--- 106
            A+           LP   +Y +LEPC         CA  I  A +RR+      P    
Sbjct: 284 AAL--AKVDPEDPRLPGATVYSSLEPCARRASRPAPCARLILDAGVRRVVTAWREPDTFV 341

Query: 107 GGGIENG 113
            G   +G
Sbjct: 342 AGADGSG 348


>gi|327400004|ref|YP_004340843.1| CMP/dCMP deaminase zinc-binding protein [Archaeoglobus veneficus
           SNP6]
 gi|327315512|gb|AEA46128.1| CMP/dCMP deaminase zinc-binding protein [Archaeoglobus veneficus
           SNP6]
          Length = 159

 Score = 71.1 bits (174), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 33/142 (23%), Positives = 51/142 (35%), Gaps = 30/142 (21%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGN--------------RNRELKD 49
            + FM  A   A  +    +  VGA+ V + +I++   N                +EL  
Sbjct: 10  DHYFMEIARVVASRSTCLRQK-VGALIVKDKRILATGYNGAPSGLPHCLEIGCLRKELNV 68

Query: 50  VTA---------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
            +          HAE  AI      +    +    LY T +PC MCA  I  A I+++ Y
Sbjct: 69  PSGERHELCRAVHAEQNAIIQAA--VHGVSIVGGTLYTTHQPCIMCAKMIINAGIKKVVY 126

Query: 101 GASNPKGGGIENGTQFYTLATC 122
           G    +      G +F   A  
Sbjct: 127 G----RRYADGRGLEFLKEAGI 144


>gi|225685288|gb|EEH23572.1| predicted protein [Paracoccidioides brasiliensis Pb03]
          Length = 241

 Score = 71.1 bits (174), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 30/122 (24%), Positives = 45/122 (36%), Gaps = 28/122 (22%)

Query: 6   VFMSCALEEAQNAALRNEIP-----VGAVAV---LNNKI---ISRAGNRNRELKDVTAHA 54
            +M  A      A      P      G V V      ++   I    N N +  + T+H 
Sbjct: 49  YWMRRA----NQALSDLGSPCPFAAFGTVIVNHTKQGELGDLICIGVNENSKTGNPTSHG 104

Query: 55  EILAIRMGCRILSQEI-------------LPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
           EI AI    ++L+ +                E+ LY   E C+MC +AI  A  +   YG
Sbjct: 105 EIAAITNCTKVLTDKSGRFKMTPSQTLNAFQELTLYSNAESCSMCTSAIRWAGFKEYVYG 164

Query: 102 AS 103
           +S
Sbjct: 165 SS 166


>gi|309810737|ref|ZP_07704545.1| riboflavin biosynthesis protein RibD [Dermacoccus sp. Ellin185]
 gi|308435368|gb|EFP59192.1| riboflavin biosynthesis protein RibD [Dermacoccus sp. Ellin185]
          Length = 340

 Score = 71.1 bits (174), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 33/122 (27%), Positives = 47/122 (38%), Gaps = 15/122 (12%)

Query: 8   MSCALEEAQNAALRNEIP-VGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M  A + A  +   +  P VG V V  +  I++   +R       T H    A  +   I
Sbjct: 1   MERAAQLAALSPRVDPNPRVGCVVVDADGVILAEGYHR----GAGTWH--AEAAAINEAI 54

Query: 66  LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
            +   L     YVTLEPC        CA A+  A + R+ +G  +P G     G Q    
Sbjct: 55  ATGVDLRGATAYVTLEPCAHTGRTPSCARALIRAGVARVVFGQPDPNGAAAG-GAQILRE 113

Query: 120 AT 121
           A 
Sbjct: 114 AG 115


>gi|283796628|ref|ZP_06345781.1| putative deoxycytidylate deaminase [Clostridium sp. M62/1]
 gi|291076051|gb|EFE13415.1| putative deoxycytidylate deaminase [Clostridium sp. M62/1]
 gi|295092489|emb|CBK78596.1| Deoxycytidylate deaminase [Clostridium cf. saccharolyticum K10]
 gi|295115332|emb|CBL36179.1| Deoxycytidylate deaminase [butyrate-producing bacterium SM4/1]
          Length = 176

 Score = 71.1 bits (174), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 40/125 (32%), Positives = 50/125 (40%), Gaps = 33/125 (26%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVL-NNKIISRAGN-------------- 42
           +     FM  A    + AA+R++ P   VGA  V  +NKI+S   N              
Sbjct: 21  ITWDEYFMGVA----KLAAMRSKDPSTQVGACIVSSDNKILSMGYNGFPIGCSDDEFPWG 76

Query: 43  RNRELKDV-------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARI 95
           +  E  D        T H+E+ AI           L    LYVTL PC  CA AI  A I
Sbjct: 77  KEHETDDPYNAKYLYTTHSELNAILN----YRGGSLEGSKLYVTLFPCNECAKAIIQAGI 132

Query: 96  RRLYY 100
           R L Y
Sbjct: 133 RTLVY 137


>gi|330504323|ref|YP_004381192.1| CMP/dCMP deaminase, zinc-binding protein [Pseudomonas mendocina
           NK-01]
 gi|328918609|gb|AEB59440.1| CMP/dCMP deaminase, zinc-binding protein [Pseudomonas mendocina
           NK-01]
          Length = 184

 Score = 71.1 bits (174), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 32/107 (29%), Positives = 47/107 (43%), Gaps = 2/107 (1%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRN-RELKDVTAHAEILAIRM 61
            +++     E+A  A       VGA+ V    +++    N+         AHAE+  +  
Sbjct: 19  DDIWARLCCEQALLAIEDGCYAVGALLVDEAGELLCSGRNQVFASAYASAAHAEMQVLDQ 78

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGG 108
             R   Q     + LYV+LEPC MC   I LA I R+ Y A +  GG
Sbjct: 79  LEREHPQVDRRGLTLYVSLEPCLMCYGRILLAGITRVRYLARDRDGG 125


>gi|328873326|gb|EGG21693.1| CMP/dCMP deaminase [Dictyostelium fasciculatum]
          Length = 276

 Score = 71.1 bits (174), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 25/80 (31%), Positives = 34/80 (42%), Gaps = 4/80 (5%)

Query: 26  VGAVAVL--NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83
             A+ V    N+ I    N+    K +  H EI AI     I  +       LY T E C
Sbjct: 71  FSALIVDAVTNEEICYGYNQ--GGKSMIYHGEIQAIMNCTTITGRNSWSGTYLYTTGESC 128

Query: 84  TMCAAAISLARIRRLYYGAS 103
            MC AAI  +   ++ YG+S
Sbjct: 129 PMCQAAIMWSGFDKVIYGSS 148


>gi|257463951|ref|ZP_05628336.1| deoxycytidylate deaminase [Fusobacterium sp. D12]
 gi|317061475|ref|ZP_07925960.1| deoxycytidylate deaminase [Fusobacterium sp. D12]
 gi|313687151|gb|EFS23986.1| deoxycytidylate deaminase [Fusobacterium sp. D12]
          Length = 160

 Score = 71.1 bits (174), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 34/122 (27%), Positives = 44/122 (36%), Gaps = 31/122 (25%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNK-IISRAGN-------------R 43
           +     FM  AL  A  +      P   VGA  V  +K II    N              
Sbjct: 7   ITWDEYFMGVALLSAMRSKD----PNTQVGACIVSPDKKIIGLGYNGLPKGCEDDEFPWE 62

Query: 44  NR----ELKDV-TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98
                 E K     HAE+ AI     + S + L    +YV L PC  C+ AI  + IR +
Sbjct: 63  REGEFLETKYPYVCHAELNAI-----LNSTQSLKNCSIYVALFPCHECSKAIIQSGIREI 117

Query: 99  YY 100
            Y
Sbjct: 118 VY 119


>gi|295107524|emb|CBL05067.1| Deoxycytidylate deaminase [Gordonibacter pamelaeae 7-10-1-b]
          Length = 153

 Score = 71.1 bits (174), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 29/122 (23%), Positives = 42/122 (34%), Gaps = 30/122 (24%)

Query: 4   GNVFMSCALEEAQN--AALRNEIPVGAVAVLNNKIISRAGN--------------RNREL 47
              FM  A E A       R    VGAV V + +I++   N                ++L
Sbjct: 12  DEYFMKLANEVATRTTCMRRG---VGAVIVKDRRILATGYNGVPTGMRHCAETGCLRQQL 68

Query: 48  KDVTA---------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98
              +          HAE  AI    R      +    +YV  +PC +CA  +  A I  +
Sbjct: 69  GVPSGQRHEICRGLHAEQNAIIQAARYGIN--ITGASIYVNTQPCVVCAKMLINAGIEEI 126

Query: 99  YY 100
            Y
Sbjct: 127 VY 128


>gi|222151486|ref|YP_002560642.1| late competence operon required for DNA binding and uptake ComEB
           [Macrococcus caseolyticus JCSC5402]
 gi|222120611|dbj|BAH17946.1| late competence operon required for DNA binding and uptake ComEB
           [Macrococcus caseolyticus JCSC5402]
          Length = 153

 Score = 71.1 bits (174), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 29/116 (25%), Positives = 48/116 (41%), Gaps = 18/116 (15%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNREL----KDV------ 50
           ++    FM+ +   A  +     + VGA  V NN+II+   N +        D       
Sbjct: 4   IQWKEYFMAQSQLLALRSTCTR-LSVGATIVKNNRIIAGGYNGSVSGEVHCIDAGCYVEG 62

Query: 51  -----TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
                T HAE+ A+    ++         D+YVT  PC  C  ++  A I+++YY 
Sbjct: 63  GHCIRTIHAEMNALLQCAKMGVTT--EGADIYVTHFPCIHCTKSLIQAGIKKIYYA 116


>gi|238882595|gb|EEQ46233.1| DRAP deaminase [Candida albicans WO-1]
          Length = 589

 Score = 71.1 bits (174), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 35/151 (23%), Positives = 58/151 (38%), Gaps = 20/151 (13%)

Query: 6   VFMSCALEEAQN-AALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
            FM  A+EEA+     + +  VG V V N ++IS   +R         HAE  A+     
Sbjct: 439 KFMEMAIEEAEKCGETQTQFNVGCVLVHNGQVISTGHSRELPGN---THAEQCALEKYFS 495

Query: 65  ILSQEI--LPEVDLYVTLEPC-------TMCAAAISLAR-IRRLYYGASNPKGGGIENGT 114
               E       +++ ++EPC         C   I   + I+  + G   P    ++N +
Sbjct: 496 KNGGEREVPAGTEIFTSMEPCSLRLSGNLPCVDRILQTKNIKTCFVGVLEPDI-FVKNNS 554

Query: 115 QFYTLATCHHSPEI--YPGISEQRSRQIIQD 143
            +  L    H  E    PG  E+   +I + 
Sbjct: 555 SYKKL--LDHGVEYIHIPGY-EETCLEIAKR 582


>gi|68482658|ref|XP_714726.1| hypothetical protein CaO19.10687 [Candida albicans SC5314]
 gi|68482929|ref|XP_714595.1| hypothetical protein CaO19.3177 [Candida albicans SC5314]
 gi|46436176|gb|EAK95543.1| hypothetical protein CaO19.3177 [Candida albicans SC5314]
 gi|46436316|gb|EAK95680.1| hypothetical protein CaO19.10687 [Candida albicans SC5314]
          Length = 589

 Score = 71.1 bits (174), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 35/151 (23%), Positives = 58/151 (38%), Gaps = 20/151 (13%)

Query: 6   VFMSCALEEAQN-AALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
            FM  A+EEA+     + +  VG V V N ++IS   +R         HAE  A+     
Sbjct: 439 KFMEMAIEEAEKCGETQTQFNVGCVLVHNGQVISTGHSRELPGN---THAEQCALEKYFS 495

Query: 65  ILSQEI--LPEVDLYVTLEPC-------TMCAAAISLAR-IRRLYYGASNPKGGGIENGT 114
               E       +++ ++EPC         C   I   + I+  + G   P    ++N +
Sbjct: 496 KNGGEREVPAGTEIFTSMEPCSLRLSGNLPCVDRILQTKNIKTCFVGVLEPDI-FVKNNS 554

Query: 115 QFYTLATCHHSPEI--YPGISEQRSRQIIQD 143
            +  L    H  E    PG  E+   +I + 
Sbjct: 555 SYKKL--LDHGVEYIHIPGY-EETCLEIAKR 582


>gi|73668393|ref|YP_304408.1| dCMP deaminase [Methanosarcina barkeri str. Fusaro]
 gi|72395555|gb|AAZ69828.1| dCMP deaminase [Methanosarcina barkeri str. Fusaro]
          Length = 159

 Score = 71.1 bits (174), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 28/123 (22%), Positives = 44/123 (35%), Gaps = 30/123 (24%)

Query: 4   GNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGN------------------- 42
              F+  A    + A    +N   VGAV V + +I+S   N                   
Sbjct: 8   DEYFLEIAFVVGKRATCLRKN---VGAVIVKDKRILSTGYNGAPSGMDHCLEIGCIRDLE 64

Query: 43  ----RNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98
                 R+ K    HAE  AI      +    +    +Y T +PC +CA  +  + I+R+
Sbjct: 65  KIPSGTRQEKCRAVHAEQNAIIQAA--IHGVSIAGATIYCTHQPCILCAKMLINSNIKRV 122

Query: 99  YYG 101
            Y 
Sbjct: 123 VYA 125


>gi|261418466|ref|YP_003252148.1| ComE operon protein 2 [Geobacillus sp. Y412MC61]
 gi|319767573|ref|YP_004133074.1| ComE operon protein 2 [Geobacillus sp. Y412MC52]
 gi|261374923|gb|ACX77666.1| ComE operon protein 2 [Geobacillus sp. Y412MC61]
 gi|317112439|gb|ADU94931.1| ComE operon protein 2 [Geobacillus sp. Y412MC52]
          Length = 156

 Score = 71.1 bits (174), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 29/116 (25%), Positives = 44/116 (37%), Gaps = 18/116 (15%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELK-----------D 49
           +     FM+ +   A  +     + VGA  V + +II+   N +               D
Sbjct: 4   ITWDQYFMAQSHLLALRSTCTR-LAVGATIVRDKRIIAGGYNGSIAGGAHCTDEGCYVID 62

Query: 50  V----TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
                T HAE+ AI    +          ++YVT  PC  C  AI  + IR +YY 
Sbjct: 63  GHCVRTIHAEMNAILQCAKFGVPT--EGAEMYVTHFPCLHCCKAIIQSGIRAVYYA 116


>gi|331266750|ref|YP_004326380.1| dCMP deaminase, competence protein [Streptococcus oralis Uo5]
 gi|326683422|emb|CBZ01040.1| dCMP deaminase, competence protein [Streptococcus oralis Uo5]
          Length = 155

 Score = 70.7 bits (173), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 31/117 (26%), Positives = 40/117 (34%), Gaps = 29/117 (24%)

Query: 4   GNVFMSCALEEA-----QNAALRNEIPVGAVAVLNNKIISRAGNRNRE------LKDV-- 50
              F + AL  A     + A       VGAV V +NK+IS   N +          D   
Sbjct: 9   DEYFAAQALLIANRSTCKRAK------VGAVLVKDNKVISTGYNGSVSGTEHCIDHDCLV 62

Query: 51  -------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
                  T HAE+ AI  G              YVT  PC  C   +     +R+ Y
Sbjct: 63  IEGHCVRTLHAEVNAILQGAERGVP---RGFTAYVTHFPCLNCTKQLLQVGCKRVVY 116


>gi|297203757|ref|ZP_06921154.1| CMP/dCMP deaminase zinc-binding protein [Streptomyces sviceus ATCC
           29083]
 gi|197711806|gb|EDY55840.1| CMP/dCMP deaminase zinc-binding protein [Streptomyces sviceus ATCC
           29083]
          Length = 203

 Score = 70.7 bits (173), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 25/153 (16%), Positives = 44/153 (28%), Gaps = 19/153 (12%)

Query: 8   MSCALEEAQNAALRN-EIPVGAVAVL--NNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           M      A          P  A+     + +I+S   N        +AHAE++A+ +   
Sbjct: 34  MRLVHRLADRNWREGNGGPFAALVAERESGRIVSVGVNVVLSTGVSSAHAEVVALGLAQI 93

Query: 65  ILSQEILPE-----VDLYVTLEPCTMCAAAISLARIRRLYYGASNP--------KGGGIE 111
                 L        +L V   PC  C  A   + +R L      P          G + 
Sbjct: 94  ATGSWDLGGDGLPSHELVVNWRPCVQCYGATMWSGVRGLVVAGQGPELEEITTFDEGPVG 153

Query: 112 NGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
                          E+   +    +  + +D+
Sbjct: 154 ADW---AEQFETRGIEVVRDVLRDEALAVFRDY 183


>gi|57168828|ref|ZP_00367959.1| riboflavin biosynthesis protein (ribG) [Campylobacter coli RM2228]
 gi|305432431|ref|ZP_07401593.1| riboflavin biosynthesis protein RibD [Campylobacter coli JV20]
 gi|57019875|gb|EAL56558.1| riboflavin biosynthesis protein (ribG) [Campylobacter coli RM2228]
 gi|304444470|gb|EFM37121.1| riboflavin biosynthesis protein RibD [Campylobacter coli JV20]
          Length = 326

 Score = 70.7 bits (173), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 42/177 (23%), Positives = 65/177 (36%), Gaps = 44/177 (24%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAV-LNNKIIS-RAGNRNRELKDVTAHAE 55
           MK  N +M+ AL EA         P   VG V +  N KI++ +A       K   AHAE
Sbjct: 1   MK--NFYMNLALNEAWK-YQFLTYPNPAVGCVILDKNEKILAIKAH-----EKAGCAHAE 52

Query: 56  ILAIRMGCRILSQEI--------------------LPEVDLYVTLEPC------TMCAAA 89
           + AI      L+ EI                      +   +VTLEPC        CA  
Sbjct: 53  LNAIAHAFTNLNPEISLPQEANAMHEFICKNHRGIFKDSIAFVTLEPCSHQGKTPPCAKL 112

Query: 90  ISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
            S    ++++    +        G +F          EI  G+ +   +++++ F K
Sbjct: 113 FSELGFKKIFISVKDENEIA-SKGAEFLKKQG----VEIEFGVLKDEGKKLLKPFLK 164


>gi|313902173|ref|ZP_07835582.1| CMP/dCMP deaminase zinc-binding [Thermaerobacter subterraneus DSM
           13965]
 gi|313467573|gb|EFR63078.1| CMP/dCMP deaminase zinc-binding [Thermaerobacter subterraneus DSM
           13965]
          Length = 186

 Score = 70.7 bits (173), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 32/128 (25%), Positives = 45/128 (35%), Gaps = 24/128 (18%)

Query: 4   GNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGN--------RNRE---LKD 49
              FM  A   A+ +      P   VGAV V + +I++   N               ++D
Sbjct: 45  DAYFMELAEVVARRSTC----PRRHVGAVLVRDRRILATGYNGAPPGFPHCTEAGCLMQD 100

Query: 50  V----TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNP 105
                T HAE  AI      L    +    LY T  PC  CA  +  A + R+ Y    P
Sbjct: 101 GHCVRTIHAEANAILQAA--LHGVTVKGSTLYTTATPCLHCAKLLIGAGVVRVVYRDWYP 158

Query: 106 KGGGIENG 113
               +E  
Sbjct: 159 DPRAVEFL 166


>gi|205374270|ref|ZP_03227069.1| hypothetical protein Bcoam_14139 [Bacillus coahuilensis m4-4]
          Length = 186

 Score = 70.7 bits (173), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 27/116 (23%), Positives = 43/116 (37%), Gaps = 18/116 (15%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKD----------- 49
           +     FM+ +   A  +     + VGA  V   ++I+   N +    D           
Sbjct: 4   ISWDQYFMAQSHLLALRSTCTR-LAVGATIVREKRVIAGGYNGSIAGGDHCIDNGCYVIE 62

Query: 50  ----VTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
                T HAE+ AI    +          +LYVT  PC  C   I  A I+++Y+ 
Sbjct: 63  NHCVRTIHAEVNAILQCAKFGVPT--EGAELYVTHFPCLQCCKTIIQAGIKKVYFA 116


>gi|315023983|gb|EFT36985.1| dCMP deaminase [Riemerella anatipestifer RA-YM]
          Length = 143

 Score = 70.7 bits (173), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 33/116 (28%), Positives = 47/116 (40%), Gaps = 19/116 (16%)

Query: 1   MKKGNVF----MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRN--------RELK 48
           M+  N F    +  A E A+ +  + +  VGA+ V +  IIS   N           + +
Sbjct: 1   MESHNKFDIAYLKMAQEWAKLSYCKRKQ-VGALIVKDRTIISDGYNGTPSGLENCCEDEQ 59

Query: 49  DVT----AHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
             T     HAE  AI    R           LY+TL PC  C+  I  + I+RL Y
Sbjct: 60  GQTKWYVLHAEANAILKLARTTQTA--EGATLYLTLSPCKECSKLIYQSGIKRLVY 113


>gi|313206907|ref|YP_004046084.1| cmp/dcmp deaminase zinc-binding protein [Riemerella anatipestifer
           DSM 15868]
 gi|312446223|gb|ADQ82578.1| CMP/dCMP deaminase zinc-binding protein [Riemerella anatipestifer
           DSM 15868]
 gi|325335656|gb|ADZ11930.1| Deoxycytidylate deaminase [Riemerella anatipestifer RA-GD]
          Length = 143

 Score = 70.7 bits (173), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 33/116 (28%), Positives = 47/116 (40%), Gaps = 19/116 (16%)

Query: 1   MKKGNVF----MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRN--------RELK 48
           M+  N F    +  A E A+ +  + +  VGA+ V +  IIS   N           + +
Sbjct: 1   MESHNKFDIAYLKMAQEWAKLSYCKRKQ-VGALIVKDRTIISDGYNGTPSGLENCCEDEQ 59

Query: 49  DVT----AHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
             T     HAE  AI    R           LY+TL PC  C+  I  + I+RL Y
Sbjct: 60  GQTKWYVLHAEANAILKLARTTQTA--EGATLYLTLSPCKECSKLIYQSGIKRLVY 113


>gi|86140853|ref|ZP_01059412.1| putative deoxycytidylate deaminase [Leeuwenhoekiella blandensis
           MED217]
 gi|85832795|gb|EAQ51244.1| putative deoxycytidylate deaminase [Leeuwenhoekiella blandensis
           MED217]
          Length = 146

 Score = 70.7 bits (173), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 32/134 (23%), Positives = 47/134 (35%), Gaps = 33/134 (24%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTA----------- 52
              ++  A E A+ +  + +  VGA+ V +  IIS   N        T            
Sbjct: 13  DIAYLRMAREWAKLSYCQRKQ-VGALIVKDKMIISDGYNGT-----PTGFENICEDEEGY 66

Query: 53  ------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY--GASN 104
                 HAE  AI                LY+TL PCT C+  I  A I+R+ +     +
Sbjct: 67  TKWYVLHAEANAILKVAASTQS--CVGATLYITLSPCTECSKLIHQAGIKRVVFNKAYKD 124

Query: 105 PKGGGIENGTQFYT 118
           P      +G  F  
Sbjct: 125 P------SGIDFLR 132


>gi|160893547|ref|ZP_02074331.1| hypothetical protein CLOL250_01101 [Clostridium sp. L2-50]
 gi|156864532|gb|EDO57963.1| hypothetical protein CLOL250_01101 [Clostridium sp. L2-50]
          Length = 174

 Score = 70.7 bits (173), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 33/122 (27%), Positives = 45/122 (36%), Gaps = 30/122 (24%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNN-KIISRAGNRN-----------R 45
           +     FM  AL  A+ +      P   VGA  V +N +I+S   N              
Sbjct: 22  ISWDQYFMGIALLSAERSKD----PSTQVGACIVDDNNRILSEGYNGMPAGCEDDIMPWG 77

Query: 46  ELKDVTA-------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98
           ++ D          HAE+ AI           L +  LY TL PC  CA AI    I+ +
Sbjct: 78  KIGDPLNNKYFFVCHAELNAILN----YRGGSLKDARLYSTLFPCNECAKAIIQCGIKEV 133

Query: 99  YY 100
            Y
Sbjct: 134 IY 135


>gi|262384379|ref|ZP_06077514.1| deoxycytidylate deaminase [Bacteroides sp. 2_1_33B]
 gi|262294082|gb|EEY82015.1| deoxycytidylate deaminase [Bacteroides sp. 2_1_33B]
          Length = 144

 Score = 70.7 bits (173), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 29/109 (26%), Positives = 43/109 (39%), Gaps = 15/109 (13%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRN--------RELKDVT---- 51
              ++  A   A+N+  +    VGA+ V +  IIS   N           +  +VT    
Sbjct: 12  DKRYLRMAAIWAENSYCKR-RQVGALLVKDKMIISDGYNGTPAGFENVCEDENNVTKPYV 70

Query: 52  AHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
            HAE  AI       +        +YVT  PC  CA  I  + I+R+ Y
Sbjct: 71  LHAEANAITKVAASSNSS--KGATIYVTSSPCIECAKLIIQSGIKRVVY 117


>gi|301111742|ref|XP_002904950.1| deoxycytidylate deaminase [Phytophthora infestans T30-4]
 gi|262095280|gb|EEY53332.1| deoxycytidylate deaminase [Phytophthora infestans T30-4]
          Length = 252

 Score = 70.7 bits (173), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 32/147 (21%), Positives = 45/147 (30%), Gaps = 38/147 (25%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNN-KIISRAGN-------------- 42
           +   + FMS A   A  +      P   VGA  V    KI+    N              
Sbjct: 93  LSWDDYFMSVAFLSAMRSKD----PSTQVGACIVNPERKIVGIGYNGFPNGCGDDELPWA 148

Query: 43  RNRELKDVTA-------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARI 95
           R                HAE+ AI       +   +    +YV L PC  CA  I  + I
Sbjct: 149 RETATNSPLDTKYPYVCHAEMNAILN----KNSTDVKGCSIYVALFPCNECAKLIIQSGI 204

Query: 96  RRLYYGASNPKGGGIENGTQFYTLATC 122
            R+ Y +   K     +  +F      
Sbjct: 205 ARVVYFSDKYK-----SDWKFVASRRL 226


>gi|21229207|ref|NP_635129.1| putative cytosine deaminase [Methanosarcina mazei Go1]
 gi|20907777|gb|AAM32801.1| putative cytosine deaminase [Methanosarcina mazei Go1]
          Length = 206

 Score = 70.7 bits (173), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 22/105 (20%), Positives = 44/105 (41%), Gaps = 9/105 (8%)

Query: 14  EAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVT----AHAEILAIRMGCRILSQ 68
            A  +       VG++ V  + + ++   N    +   +     HAE++ +        Q
Sbjct: 55  LALKSVDSGNYGVGSIIVDRDGETVAFGHNL---MYSPSFRSDLHAEMVTLNYFEEKNPQ 111

Query: 69  -EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN 112
              L +  LY +LE C MC   +  A I R+++ + +  GG  ++
Sbjct: 112 ITTLKDYTLYTSLESCPMCIIRLISAGINRVFHVSPDSIGGMADS 156


>gi|150006872|ref|YP_001301615.1| deoxycytidylate deaminase [Parabacteroides distasonis ATCC 8503]
 gi|255016096|ref|ZP_05288222.1| deoxycytidylate deaminase [Bacteroides sp. 2_1_7]
 gi|256842138|ref|ZP_05547643.1| deoxycytidylate deaminase [Parabacteroides sp. D13]
 gi|298377298|ref|ZP_06987251.1| cytidine/deoxycytidylate deaminase family protein [Bacteroides sp.
           3_1_19]
 gi|301308695|ref|ZP_07214647.1| cytidine/deoxycytidylate deaminase family protein [Bacteroides sp.
           20_3]
 gi|149935296|gb|ABR41993.1| deoxycytidylate deaminase [Parabacteroides distasonis ATCC 8503]
 gi|256736454|gb|EEU49783.1| deoxycytidylate deaminase [Parabacteroides sp. D13]
 gi|298265712|gb|EFI07372.1| cytidine/deoxycytidylate deaminase family protein [Bacteroides sp.
           3_1_19]
 gi|300833219|gb|EFK63837.1| cytidine/deoxycytidylate deaminase family protein [Bacteroides sp.
           20_3]
          Length = 144

 Score = 70.7 bits (173), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 29/109 (26%), Positives = 43/109 (39%), Gaps = 15/109 (13%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRN--------RELKDVT---- 51
              ++  A   A+N+  +    VGA+ V +  IIS   N           +  +VT    
Sbjct: 12  DKRYLRMAAIWAENSYCKR-RQVGALLVKDKMIISDGYNGTPAGFENVCEDENNVTKPYV 70

Query: 52  AHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
            HAE  AI       +        +YVT  PC  CA  I  + I+R+ Y
Sbjct: 71  LHAEANAITKVAASSNSS--KGATIYVTSSPCIECAKLIIQSGIKRVVY 117


>gi|197106417|ref|YP_002131794.1| riboflavin biosynthesis protein RibD [Phenylobacterium zucineum
           HLK1]
 gi|196479837|gb|ACG79365.1| riboflavin biosynthesis protein RibD [Phenylobacterium zucineum
           HLK1]
          Length = 143

 Score = 70.7 bits (173), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 29/141 (20%), Positives = 47/141 (33%), Gaps = 24/141 (17%)

Query: 8   MSCALEEAQ-NAALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTA-HAEILAIRMGCR 64
           M  A+  A+       E P VG V + + +++  A        D    HAE LA+     
Sbjct: 1   MRRAIALARPQVGRTGENPAVGCVILKDGRVLGEA-----ATGDGGRPHAEELALAQAGE 55

Query: 65  ILSQEILPEVDLYVTLEPC-------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFY 117
                       +VTLEPC         C+  ++ A + R+    ++P       G    
Sbjct: 56  AA-----RGATAFVTLEPCAERSSGAASCSERLAAAGMSRVVVACADPSVFAAGGGAARL 110

Query: 118 TLATCHHSPEIYPGISEQRSR 138
             A          G+ E  + 
Sbjct: 111 RAAG----IVFDQGLLEAEAA 127


>gi|68073195|ref|XP_678512.1| Cytidine and deoxycytidylate deaminase zinc-binding region
           [Plasmodium berghei strain ANKA]
 gi|56499004|emb|CAI00047.1| Cytidine and deoxycytidylate deaminase zinc-binding region,
           putative [Plasmodium berghei]
          Length = 317

 Score = 70.7 bits (173), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 28/157 (17%), Positives = 54/157 (34%), Gaps = 50/157 (31%)

Query: 27  GAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM-GCRILSQEI--------------- 70
           G V   N+KII+ +G  +        H+ +LAI     ++ +                  
Sbjct: 162 GCVLTFNDKIIACSG--DNIKNHPLHHSVMLAIEDVAFKLRNIWRFKKNKKMKNYRTKTK 219

Query: 71  ---------------LPEVD-----------------LYVTLEPCTMCAAAISLARIRRL 98
                          L                      Y+T EPC MCA A+  +R++ +
Sbjct: 220 EENNSTDDKKMDENVLENCINSNIVISSDQYLCTNYYAYLTHEPCFMCAMAMVHSRVKCV 279

Query: 99  YYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQ 135
            +   N + G + +  + + L   +H  ++Y  + E+
Sbjct: 280 IFDKVNKQNGALFSREKLHCLKNLNHHFKVYKTVREK 316


>gi|226325555|ref|ZP_03801073.1| hypothetical protein COPCOM_03360 [Coprococcus comes ATCC 27758]
 gi|225206038|gb|EEG88392.1| hypothetical protein COPCOM_03360 [Coprococcus comes ATCC 27758]
          Length = 162

 Score = 70.7 bits (173), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 34/123 (27%), Positives = 47/123 (38%), Gaps = 31/123 (25%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAV-LNNKIISRAGNR------------N 44
           +     FM  A+   + +      P   VG   V  +NKI+S   N              
Sbjct: 9   ISWDEYFMGVAILSGRRSKD----PNTQVGCCIVSADNKILSMGYNGLPRGCSDDEFPWE 64

Query: 45  RELKDV-------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRR 97
           RE +D        T H+E+ AI       S   L    LYV+L PC  CA AI  + I+ 
Sbjct: 65  REGEDPLKTKYVYTVHSELNAILN----YSGGSLEGAKLYVSLFPCNECAKAIIQSGIKE 120

Query: 98  LYY 100
           + Y
Sbjct: 121 VIY 123


>gi|42561111|ref|NP_975562.1| dCMP deaminase [Mycoplasma mycoides subsp. mycoides SC str. PG1]
 gi|42492608|emb|CAE77204.1| dCMP deaminase [Mycoplasma mycoides subsp. mycoides SC str. PG1]
 gi|256384072|gb|ACU78642.1| deoxycytidylate deaminase [Mycoplasma mycoides subsp. capri str.
           GM12]
 gi|256384904|gb|ACU79473.1| deoxycytidylate deaminase [Mycoplasma mycoides subsp. capri str.
           GM12]
 gi|296455570|gb|ADH21805.1| deoxycytidylate deaminase (dCMP deaminase) [synthetic Mycoplasma
           mycoides JCVI-syn1.0]
 gi|301320471|gb|ADK69114.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Mycoplasma mycoides subsp. mycoides SC str. Gladysdale]
          Length = 160

 Score = 70.7 bits (173), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 39/124 (31%), Positives = 53/124 (42%), Gaps = 33/124 (26%)

Query: 5   NVFMSCALEEAQNAALRNEIP---VGAVAVLN-NKIISRAGNR-NRELKD---V------ 50
           + FM  A   A  +      P   VGA+ V    +I++   N   R + D          
Sbjct: 12  HYFMLIAKASAMRSKD----PNTQVGAIVVNELQQIVATGYNGFPRGVSDDEFPWSKNNE 67

Query: 51  ---------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
                     AHAE+ AI     + S+  L   DLYVTL PC  CA  I  A I+R+YY 
Sbjct: 68  DWLENKYAYVAHAELNAI-----VSSRSDLSNCDLYVTLFPCNECAKIIIQAGIKRIYY- 121

Query: 102 ASNP 105
           A++P
Sbjct: 122 ANDP 125


>gi|15613897|ref|NP_242200.1| late competence operon required for DNA binding and uptake
           [Bacillus halodurans C-125]
 gi|10173950|dbj|BAB05053.1| late competence operon required for DNA binding and uptake
           [Bacillus halodurans C-125]
          Length = 188

 Score = 70.7 bits (173), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 26/118 (22%), Positives = 43/118 (36%), Gaps = 18/118 (15%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNR---------------NR 45
           +     FM+ +   A  +     + VGA  V + +II+   N                  
Sbjct: 4   ISWDQYFMAQSHLLALRSTCTR-LMVGATIVRDKRIIAGGYNGSISGGPHCIDEGCYVVE 62

Query: 46  ELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
                T HAE+ A+    +          ++YVT  PC  C  AI  + I+++YY   
Sbjct: 63  GHCIRTIHAEVNALLQCAKFGVPT--EGAEIYVTHFPCVNCTKAIIQSGIKKVYYATD 118


>gi|332970483|gb|EGK09473.1| cytidine/deoxycytidylate deaminase [Psychrobacter sp. 1501(2011)]
          Length = 164

 Score = 70.7 bits (173), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 22/80 (27%), Positives = 38/80 (47%), Gaps = 2/80 (2%)

Query: 22  NEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80
            + P G+V V    ++I    NR   ++  T H E+   +     ++Q    E  +Y + 
Sbjct: 24  GDSPFGSVLVSGSGEVIREDRNRVNSVE-PTYHPELALAQWAAENMTQAQRSEAVVYTSG 82

Query: 81  EPCTMCAAAISLARIRRLYY 100
           E C MC+AA + A + R+ Y
Sbjct: 83  EHCAMCSAAHAWAGLGRIVY 102


>gi|266619532|ref|ZP_06112467.1| putative deoxycytidylate deaminase [Clostridium hathewayi DSM
           13479]
 gi|288868943|gb|EFD01242.1| putative deoxycytidylate deaminase [Clostridium hathewayi DSM
           13479]
          Length = 166

 Score = 70.7 bits (173), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 34/128 (26%), Positives = 48/128 (37%), Gaps = 33/128 (25%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVL-NNKIISRAGN-------------- 42
           +     FM  A+   + +      P   VGA  V  +NKI+S   N              
Sbjct: 11  ITWDEYFMGVAMLSGKRSKD----PSTQVGACIVSQDNKILSMGYNGFPKGCSDDEFPWG 66

Query: 43  RNRELKDV-------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARI 95
           +  E  D        + H+E+ AI           L    LYVTL PC  CA AI  + I
Sbjct: 67  KEHEKDDPYNAKYFYSTHSELNAILN----YRGGSLEGSKLYVTLFPCNECAKAIIQSGI 122

Query: 96  RRLYYGAS 103
           + + YG+ 
Sbjct: 123 KTIVYGSD 130


>gi|39996786|ref|NP_952737.1| cytidine/deoxycytidylate deaminase family protein [Geobacter
           sulfurreducens PCA]
 gi|39983674|gb|AAR35064.1| cytidine/deoxycytidylate deaminase family protein [Geobacter
           sulfurreducens PCA]
 gi|298505797|gb|ADI84520.1| deoxycytidylate deaminase [Geobacter sulfurreducens KN400]
          Length = 154

 Score = 70.7 bits (173), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 29/127 (22%), Positives = 43/127 (33%), Gaps = 28/127 (22%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGN--------------RNRELKD 49
              FM      A+ +       VGAV V +  I++   N                  L  
Sbjct: 7   DEYFMEITHLVAKRSTCLR-RQVGAVIVKDKNILATGYNGAPSGVAHCLDVGCLRERLGI 65

Query: 50  VTA---------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
            +          HAE  AI    +  +   +    LY T  PC +C+  +  A IRR+ Y
Sbjct: 66  PSGERHELCRGLHAEQNAIIQAAKHGTN--IDGGTLYCTTMPCIICSKMLINAGIRRIVY 123

Query: 101 --GASNP 105
             G S+ 
Sbjct: 124 EEGYSDD 130


>gi|15675651|ref|NP_269825.1| putative DNA-binding late competence protein [Streptococcus
           pyogenes M1 GAS]
 gi|19746757|ref|NP_607893.1| late competence protein [Streptococcus pyogenes MGAS8232]
 gi|21911111|ref|NP_665379.1| putative late competence protein required for DNA binding
           [Streptococcus pyogenes MGAS315]
 gi|28895204|ref|NP_801554.1| late competence protein required for DNA binding [Streptococcus
           pyogenes SSI-1]
 gi|71911361|ref|YP_282911.1| comE operon protein 2 [Streptococcus pyogenes MGAS5005]
 gi|139473178|ref|YP_001127893.1| cytidine and deoxycytidylate deaminase [Streptococcus pyogenes str.
           Manfredo]
 gi|209559918|ref|YP_002286390.1| Putative late competence protein required for DNA binding
           [Streptococcus pyogenes NZ131]
 gi|13622863|gb|AAK34546.1| putative late competence protein required for DNA binding
           [Streptococcus pyogenes M1 GAS]
 gi|19748988|gb|AAL98392.1| putative late competence protein [Streptococcus pyogenes MGAS8232]
 gi|21905321|gb|AAM80182.1| putative late competence protein required for DNA binding
           [Streptococcus pyogenes MGAS315]
 gi|28810450|dbj|BAC63387.1| putative late competence protein required for DNA binding
           [Streptococcus pyogenes SSI-1]
 gi|71854143|gb|AAZ52166.1| comE operon protein 2 [Streptococcus pyogenes MGAS5005]
 gi|134271424|emb|CAM29644.1| putative cytidine and deoxycytidylate deaminase [Streptococcus
           pyogenes str. Manfredo]
 gi|209541119|gb|ACI61695.1| Putative late competence protein required for DNA binding
           [Streptococcus pyogenes NZ131]
          Length = 153

 Score = 70.7 bits (173), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 25/90 (27%), Positives = 36/90 (40%), Gaps = 17/90 (18%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKD---------------VTAHAEILAIRMGCRILSQEI 70
           VGAV V +N+II+   N      D                T HAE+ A+    +      
Sbjct: 29  VGAVLVKDNRIIATGYNGGVSATDNCNEAGHYMEDGHCIRTVHAEMNALIQCAKEGISTD 88

Query: 71  LPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
               ++YVT  PC  C  A+  A I ++ Y
Sbjct: 89  --GTEIYVTHFPCINCTKALLQAGITKITY 116


>gi|323465756|gb|ADX69443.1| DCMP deaminase [Lactobacillus helveticus H10]
          Length = 159

 Score = 70.7 bits (173), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 28/111 (25%), Positives = 47/111 (42%), Gaps = 18/111 (16%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELK-----------DV--- 50
             FM  AL  AQ +     + VG+V V +N+II    N +   +           D    
Sbjct: 9   QYFMMQALVIAQRSTCNRAL-VGSVLVKDNRIIGTGYNGSVSGQPHCDEVGHQMVDGHCV 67

Query: 51  -TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
            T H+E+ AI    +        + ++YVT  PC  C  ++  A ++++ Y
Sbjct: 68  RTIHSEMNAIIQCAKFGVSTD--DTEIYVTHFPCYNCCKSLLQAGVKKINY 116


>gi|238926636|ref|ZP_04658396.1| dCMP deaminase [Selenomonas flueggei ATCC 43531]
 gi|238885582|gb|EEQ49220.1| dCMP deaminase [Selenomonas flueggei ATCC 43531]
          Length = 158

 Score = 70.7 bits (173), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 31/122 (25%), Positives = 40/122 (32%), Gaps = 31/122 (25%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNK-IISRAGNRNRELKD------- 49
           +     FM  AL  A  +      P   VGA  V  +K I+    N      D       
Sbjct: 3   ISWDEYFMGVALFSAYRSKD----PHTQVGACIVNEDKHIVGVGYNGMPNGCDDHEYPWG 58

Query: 50  VTA-----------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98
            T            HAE+ AI           L    +Y +L PC  C  AI  + IR +
Sbjct: 59  RTGEFAEQKYPYVVHAELNAILNA-----STSLKGCRIYTSLFPCNECCKAIIQSGIREV 113

Query: 99  YY 100
            Y
Sbjct: 114 IY 115


>gi|237736005|ref|ZP_04566486.1| deoxycytidylate deaminase [Fusobacterium mortiferum ATCC 9817]
 gi|229421886|gb|EEO36933.1| deoxycytidylate deaminase [Fusobacterium mortiferum ATCC 9817]
          Length = 163

 Score = 70.7 bits (173), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 33/122 (27%), Positives = 44/122 (36%), Gaps = 31/122 (25%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNK-IISRAGN-------------R 43
           ++    FM  AL   + +      P   VGA  V   K I+    N              
Sbjct: 7   IEWDEYFMGVALLSGKRSKD----PNTQVGACIVNEEKKIVGVGYNGLPIGCSDDEYPWE 62

Query: 44  NR----ELKDV-TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98
                 E K     HAE+ AI     + S + L    +YV L PC  C+ AI  + IR L
Sbjct: 63  REGEFLETKYPFVCHAELNAI-----LNSTKSLKNCTIYVALFPCHECSKAIIQSGIREL 117

Query: 99  YY 100
            Y
Sbjct: 118 VY 119


>gi|171691995|ref|XP_001910922.1| hypothetical protein [Podospora anserina S mat+]
 gi|170945946|emb|CAP72747.1| unnamed protein product [Podospora anserina S mat+]
          Length = 353

 Score = 70.3 bits (172), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 30/122 (24%), Positives = 38/122 (31%), Gaps = 31/122 (25%)

Query: 4   GNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGNRN--------RELKDVTA- 52
              FM+ A   AQ A    R    VG V V + ++IS   N              D    
Sbjct: 197 DAYFMALAELAAQRANCMKRR---VGCVIVRDKRVISTGYNGTPRGLVNCGEGGCDRCNA 253

Query: 53  --------------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98
                         HAE  A+    R   +E      LY T  PC  C+  I    I  +
Sbjct: 254 GQGSGHGLTTCLCIHAEENALLEAGRERVRE---GAVLYCTTHPCLTCSIKIVQVGIGEV 310

Query: 99  YY 100
            Y
Sbjct: 311 VY 312


>gi|323490043|ref|ZP_08095264.1| ComE operon protein 2 [Planococcus donghaensis MPA1U2]
 gi|323396339|gb|EGA89164.1| ComE operon protein 2 [Planococcus donghaensis MPA1U2]
          Length = 190

 Score = 70.3 bits (172), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 33/125 (26%), Positives = 51/125 (40%), Gaps = 22/125 (17%)

Query: 1   MKK---GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKD-------- 49
           MK+      FM+ +   A  +     + VGA  V + +I++   N +    D        
Sbjct: 1   MKRITWDQFFMAQSHLLALRSTCTR-LAVGATIVRDRRIMAGGYNGSISGGDHCIDKGCY 59

Query: 50  -------VTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGA 102
                   T HAE+ A+    +      +   D+YV+  PC  C  +I  A I RLYY A
Sbjct: 60  VVDGHCVRTIHAEMNALLQCSKYGVS--VNGADMYVSHFPCLQCTKSIIQAGIARLYY-A 116

Query: 103 SNPKG 107
           S+ K 
Sbjct: 117 SDYKN 121


>gi|255727408|ref|XP_002548630.1| cytosine deaminase [Candida tropicalis MYA-3404]
 gi|240134554|gb|EER34109.1| cytosine deaminase [Candida tropicalis MYA-3404]
          Length = 93

 Score = 70.3 bits (172), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 23/93 (24%), Positives = 40/93 (43%), Gaps = 10/93 (10%)

Query: 56  ILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
           + A+    R+  +    +  +Y TL PC MC  AI L  I+R+  G  N    G E+  +
Sbjct: 1   MSALEDAGRLPGKAY-KDCTIYTTLSPCNMCTGAILLYGIKRVVMG-ENVNFQGAEDLLR 58

Query: 116 FYTLATCHHSPEIYPGISEQRSRQIIQDFFKER 148
              +   +        + +   ++I+  F KER
Sbjct: 59  ANGVEVIN--------LDDNDCKEIMSKFIKER 83


>gi|170037331|ref|XP_001846512.1| deoxycytidylate deaminase [Culex quinquefasciatus]
 gi|167880421|gb|EDS43804.1| deoxycytidylate deaminase [Culex quinquefasciatus]
          Length = 193

 Score = 70.3 bits (172), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 30/120 (25%), Positives = 42/120 (35%), Gaps = 31/120 (25%)

Query: 4   GNVFMSCALEEAQNAALRNEIP---VGAVAVLNN-KIISRAGNR------------NREL 47
              FM+ A   A+ +      P   VGA  V +  KI+    N              +  
Sbjct: 26  NEYFMATAFLAAKRSKD----PNTQVGACIVNDERKIVGVGYNGFPIGCGDDDFPWGKNS 81

Query: 48  KDVTA-------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
            D          HAE+ AI       +   +    +YV L PC  CA  I  +RIR + Y
Sbjct: 82  NDPLDTKYLYVCHAEMNAILN----KNSSDVKNCTMYVALFPCNECAKIIIQSRIREVIY 137


>gi|148232294|ref|NP_001084625.1| dCMP deaminase [Xenopus laevis]
 gi|46249834|gb|AAH68731.1| MGC81193 protein [Xenopus laevis]
          Length = 190

 Score = 70.3 bits (172), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 34/156 (21%), Positives = 50/156 (32%), Gaps = 39/156 (25%)

Query: 5   NVFMSCALEEAQNAALRNEIP---VGAVAV-LNNKIISRAGN-RNRELKD------VTA- 52
             FM+ A   AQ +      P   VGA  V   NKI+    N       D       TA 
Sbjct: 28  EYFMAVAFLAAQRSKD----PSSQVGACIVNSENKIVGIGYNGMPNGCHDDVLPWARTAE 83

Query: 53  -----------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY- 100
                      HAE+ AI       +   +    +YV L PC  CA  +  A I+ + + 
Sbjct: 84  DRLDTKYPYVCHAELNAIMN----KNTADVKGCTMYVALFPCNECAKLVIQAGIKEVVFM 139

Query: 101 ---GASNPKGGGIENGTQFYTLATCH----HSPEIY 129
                 NP+     +      +   +    H   + 
Sbjct: 140 SDKYHDNPEMTAARHMFDLAGIKYTNFIPKHRKIVI 175


>gi|90419410|ref|ZP_01227320.1| riboflavin biosynthesis protein [Aurantimonas manganoxydans
           SI85-9A1]
 gi|90336347|gb|EAS50088.1| riboflavin biosynthesis protein [Aurantimonas manganoxydans
           SI85-9A1]
          Length = 383

 Score = 70.3 bits (172), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 30/148 (20%), Positives = 46/148 (31%), Gaps = 25/148 (16%)

Query: 4   GNVFMSCALEEAQN--AALRNEIPVGAVAVLNN----KIISRAGNRNRELKDVTAHAEIL 57
              FM+ A+  AQ           V  + V ++    +I+ R             HAE  
Sbjct: 19  DRRFMAAAIRYAQRHVGRTATNPSVATLIVRDDGTGPRIVGRG----VTAIGGRPHAETG 74

Query: 58  AIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIE 111
           A+     +           YVTLEPC        CA A+  A I R+   A++P      
Sbjct: 75  ALAEAGELA-----RGATAYVTLEPCAHHGRTPPCAEALVTAGIARVVSAAADPDPRVDG 129

Query: 112 NGTQFYTLATCHHSPEIYPGISEQRSRQ 139
            G              + P +    +  
Sbjct: 130 RGHAILRAGGL----SVTPRVMAAEAAA 153


>gi|296170729|ref|ZP_06852302.1| riboflavin biosynthesis protein RibD [Mycobacterium
           parascrofulaceum ATCC BAA-614]
 gi|295894612|gb|EFG74348.1| riboflavin biosynthesis protein RibD [Mycobacterium
           parascrofulaceum ATCC BAA-614]
          Length = 340

 Score = 70.3 bits (172), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 29/151 (19%), Positives = 55/151 (36%), Gaps = 22/151 (14%)

Query: 8   MSCALEEAQ--NAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M  A+E+++          PVGAV +    ++   G       D   HAE+LA+R    +
Sbjct: 12  MRLAIEQSKQVKGTTYPNPPVGAVVLDAGGVVVGVGGTEPAGGD---HAEVLALRRAGDL 68

Query: 66  LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
                       VTLEPC        C  A+  A++  + Y  ++P              
Sbjct: 69  A-----AGGTAVVTLEPCNHHGRTPPCVNALLEAKVATVVYAVADPNP-----AAAGGAA 118

Query: 120 ATCHHSPEIYPGISEQR-SRQIIQDFFKERR 149
                  ++  G+     +   ++++  ++R
Sbjct: 119 RLAEAGVQVTGGVLADEVAGGPLREWLHKQR 149


>gi|282875983|ref|ZP_06284850.1| ComE operon protein 2 [Staphylococcus epidermidis SK135]
 gi|281295008|gb|EFA87535.1| ComE operon protein 2 [Staphylococcus epidermidis SK135]
          Length = 153

 Score = 70.3 bits (172), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 27/116 (23%), Positives = 44/116 (37%), Gaps = 18/116 (15%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRE-------------- 46
           +K    FM+ +   A  +  +  + VGA  V +N+II+   N +                
Sbjct: 4   IKWEEYFMAQSHLLALRSTCKR-LSVGATIVKDNRIIAGGYNGSVAGEVHCIDEGCLIED 62

Query: 47  -LKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
                T HAE+  +    +           +YVT  PC  C  +I  A I+ +YY 
Sbjct: 63  GHCIRTIHAEMNTLLQCAKQGVST--EGATIYVTHFPCLNCTKSIIQAGIKTIYYA 116


>gi|260185721|ref|ZP_05763195.1| deaminase [Mycobacterium tuberculosis CPHL_A]
 gi|289446393|ref|ZP_06436137.1| deaminase [Mycobacterium tuberculosis CPHL_A]
 gi|289419351|gb|EFD16552.1| deaminase [Mycobacterium tuberculosis CPHL_A]
          Length = 140

 Score = 70.3 bits (172), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 20/55 (36%), Positives = 26/55 (47%)

Query: 46  ELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
           +  D TAHAE LAIR  C  L  E L    L V   PC MC  ++    +  + +
Sbjct: 13  QTNDPTAHAESLAIRAACTKLGTEHLVGTTLNVLAHPCPMCYGSLYYCSLDEVVF 67


>gi|318081273|ref|ZP_07988605.1| putative riboflavin/cytosine deaminase [Streptomyces sp. SA3_actF]
          Length = 254

 Score = 70.3 bits (172), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 28/141 (19%), Positives = 49/141 (34%), Gaps = 25/141 (17%)

Query: 9   SCALEEAQNAALR---NEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
             A+  A     R   N + VG V +  + ++     ++         HAEI A+R    
Sbjct: 11  REAIALAARGLGRTRPNPV-VGCVVLDASGEVAGSGWHQRAGG----PHAEIHALRAAG- 64

Query: 65  ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
               E        VTLEPC        C+ A+  A +RR+ +  ++P             
Sbjct: 65  ----ERARGGTALVTLEPCDHTGRTGPCSRALIEAGVRRVVHAVADPTDQATGGADTLRA 120

Query: 119 LATCHHSPEIYPGISEQRSRQ 139
                   ++  G+ E+ +  
Sbjct: 121 A-----GVDVEHGLLEREAAD 136


>gi|294643957|ref|ZP_06721744.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Bacteroides ovatus SD CC 2a]
 gi|294807647|ref|ZP_06766440.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Bacteroides xylanisolvens SD CC 1b]
 gi|292640729|gb|EFF58960.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Bacteroides ovatus SD CC 2a]
 gi|294445083|gb|EFG13757.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Bacteroides xylanisolvens SD CC 1b]
          Length = 293

 Score = 70.3 bits (172), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 32/126 (25%), Positives = 45/126 (35%), Gaps = 21/126 (16%)

Query: 8   MSCALEEAQNAALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  A+EE          P VGAV   +  I+++A       K    HAE +AI      L
Sbjct: 37  MKIAIEEQSKCTS---FPKVGAVIAKDGIILAKAFKDEESSK----HAERIAIE----KL 85

Query: 67  SQEILPEVDLYVTLEPCT---------MCAAAISLARIRRLYYGASNPKGGGIENGTQFY 117
            +  L    L  TLEPC           C   I  + I+ +  G  +P G     G +  
Sbjct: 86  DKSTLNGATLVTTLEPCINIANNQPLQSCTDLIIESGIKDVIIGILDPNGAIYCQGYEKL 145

Query: 118 TLATCH 123
                +
Sbjct: 146 LENNIN 151


>gi|237716221|ref|ZP_04546702.1| CMP/dCMP deaminase [Bacteroides sp. D1]
 gi|262407829|ref|ZP_06084377.1| CMP/dCMP deaminase [Bacteroides sp. 2_1_22]
 gi|229443868|gb|EEO49659.1| CMP/dCMP deaminase [Bacteroides sp. D1]
 gi|262354637|gb|EEZ03729.1| CMP/dCMP deaminase [Bacteroides sp. 2_1_22]
          Length = 276

 Score = 70.3 bits (172), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 32/126 (25%), Positives = 45/126 (35%), Gaps = 21/126 (16%)

Query: 8   MSCALEEAQNAALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  A+EE          P VGAV   +  I+++A       K    HAE +AI      L
Sbjct: 20  MKIAIEEQSKCTS---FPKVGAVIAKDGIILAKAFKDEESSK----HAERIAIE----KL 68

Query: 67  SQEILPEVDLYVTLEPCT---------MCAAAISLARIRRLYYGASNPKGGGIENGTQFY 117
            +  L    L  TLEPC           C   I  + I+ +  G  +P G     G +  
Sbjct: 69  DKSTLNGATLVTTLEPCINIANNQPLQSCTDLIIESGIKDVIIGILDPNGAIYCQGYEKL 128

Query: 118 TLATCH 123
                +
Sbjct: 129 LENNIN 134


>gi|25028272|ref|NP_738326.1| diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Corynebacterium efficiens YS-314]
 gi|23493556|dbj|BAC18526.1| diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Corynebacterium efficiens YS-314]
          Length = 328

 Score = 70.3 bits (172), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 27/121 (22%), Positives = 42/121 (34%), Gaps = 22/121 (18%)

Query: 9   SCALEEAQNAALR--N----EIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRM 61
             AL+ A  A+           PVGAV +  + ++      +        AHAE++A+  
Sbjct: 4   EEALQLAIEASEEVVGTTSPNPPVGAVILDADGELAGIGATQPPGG----AHAEVMALAA 59

Query: 62  GCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQ 115
                           VTLEPC        C+ A+  A I R++Y   +P          
Sbjct: 60  AG-----PRARGGTAVVTLEPCNHTGRTGPCSQALIDAGIARVFYANPDPFPQAAGGADH 114

Query: 116 F 116
            
Sbjct: 115 L 115


>gi|157117008|ref|XP_001652931.1| cytidine and deoxycytidylate deaminase zinc-binding region [Aedes
           aegypti]
 gi|108876253|gb|EAT40478.1| cytidine and deoxycytidylate deaminase zinc-binding region [Aedes
           aegypti]
          Length = 376

 Score = 70.3 bits (172), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 23/87 (26%), Positives = 43/87 (49%), Gaps = 7/87 (8%)

Query: 43  RNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGA 102
            +  L D++ H                +    D+Y+T EPC MCA A++ +R+RR++Y  
Sbjct: 294 ESISLDDISPH------EDNLTKYGPYLCTGYDVYLTHEPCIMCAMALTHSRVRRVFYHF 347

Query: 103 SNPKGGGIENGTQFYTLATCHHSPEIY 129
           +  K GG+ + T+ +     +H  E++
Sbjct: 348 NTAK-GGLGSITKVHCAKGLNHHYEVF 373


>gi|304391942|ref|ZP_07373884.1| riboflavin biosynthesis protein RibD [Ahrensia sp. R2A130]
 gi|303296171|gb|EFL90529.1| riboflavin biosynthesis protein RibD [Ahrensia sp. R2A130]
          Length = 367

 Score = 70.3 bits (172), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 30/156 (19%), Positives = 53/156 (33%), Gaps = 21/156 (13%)

Query: 2   KKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
           +    +M   L  A+    L    P VG + V + +++ R        K    HAE +A+
Sbjct: 13  RTHAEWMGACLRLARRHRGLTGTNPSVGTLLVKDGRVVGRG----ITAKGGRPHAERVAL 68

Query: 60  RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113
                            YVTLEPC        CA A+  A +  ++    +P       G
Sbjct: 69  DQAG-----PNAVGSIAYVTLEPCAHHGATPPCAQALINAGVAEVHTAYIDPDHRVDGKG 123

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
                 A       ++ G   + +   ++ +   +R
Sbjct: 124 HAMLREAE----IAVHAGQGSEIAGSDMRGYLTRKR 155


>gi|282162767|ref|YP_003355152.1| hypothetical protein MCP_0097 [Methanocella paludicola SANAE]
 gi|282155081|dbj|BAI60169.1| conserved hypothetical protein [Methanocella paludicola SANAE]
          Length = 162

 Score = 70.3 bits (172), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 29/128 (22%), Positives = 42/128 (32%), Gaps = 30/128 (23%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGN--------------------- 42
              FM  A   A+ +     I VGAV V   +I+S   N                     
Sbjct: 9   DEYFMEIANVVAKRSTCLR-IHVGAVIVKGGQILSTGYNGAPHGFEHCLDIGCIREKENV 67

Query: 43  ---RNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLY 99
                 EL     HAE  AI      +    +    +Y T +PC +C   I   +I R+ 
Sbjct: 68  AHGTRHELCRAV-HAEQNAIIQAA--IHGVSIEGATVYCTHQPCILCTKMIINCKINRVV 124

Query: 100 Y--GASNP 105
           +  G  + 
Sbjct: 125 FQNGYPDE 132


>gi|254389244|ref|ZP_05004473.1| riboflavin/cytosine deaminase [Streptomyces clavuligerus ATCC
           27064]
 gi|326444934|ref|ZP_08219668.1| putative deaminase [Streptomyces clavuligerus ATCC 27064]
 gi|197702960|gb|EDY48772.1| riboflavin/cytosine deaminase [Streptomyces clavuligerus ATCC
           27064]
          Length = 154

 Score = 70.3 bits (172), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 29/114 (25%), Positives = 38/114 (33%), Gaps = 14/114 (12%)

Query: 2   KKGNVFMSCALEEAQNAA-LRNEIPVGAVAVLNNK-IISRAGNRNRELKDVTAHAEILAI 59
            +   +M  A+  A           VGAV V      ++   +R     D   HAE  A+
Sbjct: 7   DQDLRWMQHAIGLAALCPPAAGAYSVGAVIVGEGGAELATGYSR---EADPRGHAEEAAL 63

Query: 60  RMGCRILSQEILPEVDLYVTLEPC-------TMCAAAISLARIRRLYYGASNPK 106
                      L    +Y TLEPC       T CA  I  A I R+      P 
Sbjct: 64  --AKLPGGDLRLATATIYSTLEPCSQRSADRTPCAGLILRAGIPRVVIAWREPN 115


>gi|302517924|ref|ZP_07270266.1| riboflavin biosynthesis protein RibD [Streptomyces sp. SPB78]
 gi|302426819|gb|EFK98634.1| riboflavin biosynthesis protein RibD [Streptomyces sp. SPB78]
          Length = 364

 Score = 70.3 bits (172), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 31/141 (21%), Positives = 51/141 (36%), Gaps = 25/141 (17%)

Query: 9   SCALEEAQNAALR---NEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
             A+  A     R   N + VG V +  + ++     ++         HAEI A+R    
Sbjct: 11  REAIALAARGLGRTRPNPV-VGCVVLDASGEVAGSGWHQRAGG----PHAEIHALRAAG- 64

Query: 65  ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
               E        VTLEPC        C+ A+  A +RR+ +  ++P       G     
Sbjct: 65  ----ERARGGTALVTLEPCDHTGRTGPCSRALIEAGVRRVVHAVADPTDQATG-GADTQR 119

Query: 119 LATCHHSPEIYPGISEQRSRQ 139
            A      +I  G+ E+ +  
Sbjct: 120 AAG----VDIEHGLLEREAAD 136


>gi|89100804|ref|ZP_01173656.1| ComEB [Bacillus sp. NRRL B-14911]
 gi|89084450|gb|EAR63599.1| ComEB [Bacillus sp. NRRL B-14911]
          Length = 195

 Score = 70.3 bits (172), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 29/116 (25%), Positives = 43/116 (37%), Gaps = 18/116 (15%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKD----------- 49
           +     FM+ +   A  +     + VGA  V + +II+   N +    D           
Sbjct: 5   LSWDQYFMAQSHLLALRSTCTR-LAVGATIVRDKRIIAGGYNGSIAGGDHCIDHGCYVID 63

Query: 50  ----VTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
                T HAE+ +I    +          D+YVT  PC  C  AI  A I  +YY 
Sbjct: 64  NHCVRTIHAEMNSILQCAKFGVPT--AGADIYVTHFPCLQCCKAIIQAGIATVYYA 117


>gi|160937837|ref|ZP_02085196.1| hypothetical protein CLOBOL_02729 [Clostridium bolteae ATCC
           BAA-613]
 gi|158439276|gb|EDP17029.1| hypothetical protein CLOBOL_02729 [Clostridium bolteae ATCC
           BAA-613]
          Length = 181

 Score = 70.3 bits (172), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 34/125 (27%), Positives = 47/125 (37%), Gaps = 33/125 (26%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVL-NNKIISRAGN-------------- 42
           +     FM  AL   + +      P   VGA  V  +NKI+S   N              
Sbjct: 26  ITWDEYFMGVALLSGRRSKD----PSTQVGACIVSQDNKILSMGYNGFPKGCSDDEFPWG 81

Query: 43  RNRELKDV-------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARI 95
           +  E +D        + H+E+ AI           L    LYVTL PC  CA AI  + I
Sbjct: 82  KENEKEDPYNSKYFYSTHSELNAILN----YRGGSLEGSKLYVTLFPCNECAKAIIQSGI 137

Query: 96  RRLYY 100
           + + Y
Sbjct: 138 KTIVY 142


>gi|297529318|ref|YP_003670593.1| ComE operon protein 2 [Geobacillus sp. C56-T3]
 gi|297252570|gb|ADI26016.1| ComE operon protein 2 [Geobacillus sp. C56-T3]
          Length = 156

 Score = 70.3 bits (172), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 29/116 (25%), Positives = 44/116 (37%), Gaps = 18/116 (15%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELK-----------D 49
           +     FM+ +   A  +     + VGA  V + +II+   N +               D
Sbjct: 4   ITWDQYFMAQSHLLALRSTCTR-LAVGATIVRDKRIIAGGYNGSIAGGAHCTDEGCYVID 62

Query: 50  V----TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
                T HAE+ AI    +          ++YVT  PC  C  AI  + IR +YY 
Sbjct: 63  GHCVRTIHAEMNAILQCAKFGVPT--EGAEMYVTHFPCLHCCKAIIQSGIRAVYYA 116


>gi|205355636|ref|ZP_03222406.1| putative riboflavin specific deaminase [Campylobacter jejuni subsp.
           jejuni CG8421]
 gi|205346413|gb|EDZ33046.1| putative riboflavin specific deaminase [Campylobacter jejuni subsp.
           jejuni CG8421]
          Length = 326

 Score = 70.3 bits (172), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 40/177 (22%), Positives = 64/177 (36%), Gaps = 44/177 (24%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAV-LNNKIIS-RAGNRNRELKDVTAHAE 55
           MK    +M+ AL EA         P   VG V +  N KI++ +A       K   AHAE
Sbjct: 1   MK--EFYMNLALNEAWK-YQFLTYPNPAVGCVILDKNEKILAIKAH-----EKAGLAHAE 52

Query: 56  ILAIRMGCRILSQEI--------------------LPEVDLYVTLEPC------TMCAAA 89
           + AI    + L  EI                      +   +VTLEPC        CA  
Sbjct: 53  LNAIAHAFKSLRPEISLPKEVNALHEFICKNHQGVFKDSIAFVTLEPCSHQGKTPPCAKL 112

Query: 90  ISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
            S    ++++    +        G +F          E+   I ++  +++++ F K
Sbjct: 113 FSELGFKKIFISVKDENKIASG-GAEFLKKQG----IEVEFDILKEEGKKLLKPFLK 164


>gi|57238634|ref|YP_179765.1| riboflavin biosynthesis protein RibD, putative [Campylobacter
           jejuni RM1221]
 gi|57167438|gb|AAW36217.1| riboflavin biosynthesis protein RibD, putative [Campylobacter
           jejuni RM1221]
 gi|315059073|gb|ADT73402.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase /
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Campylobacter jejuni subsp. jejuni S3]
          Length = 326

 Score = 70.3 bits (172), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 40/177 (22%), Positives = 64/177 (36%), Gaps = 44/177 (24%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAV-LNNKIIS-RAGNRNRELKDVTAHAE 55
           MK    +M+ AL EA         P   VG V +  N KI++ +A       K   AHAE
Sbjct: 1   MK--EFYMNLALNEAWK-YQFLTYPNPAVGCVILDKNEKILAIKAH-----EKAGLAHAE 52

Query: 56  ILAIRMGCRILSQEI--------------------LPEVDLYVTLEPC------TMCAAA 89
           + AI    + L  EI                      +   +VTLEPC        CA  
Sbjct: 53  LNAIAHAFKSLRPEISLPKEVNALHEFICKNHQGVFKDSIAFVTLEPCSHQGKTPPCAKL 112

Query: 90  ISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
            S    ++++    +        G +F          E+   I ++  +++++ F K
Sbjct: 113 FSELGFKKIFISVKDENKIASG-GAEFLKKQG----IEVEFDILKEEGKKLLKPFLK 164


>gi|218563211|ref|YP_002344991.1| riboflavin-specific deaminase/reductase [Campylobacter jejuni
           subsp. jejuni NCTC 11168]
 gi|112360918|emb|CAL35719.1| riboflavin-specific deaminase/reductase [Campylobacter jejuni
           subsp. jejuni NCTC 11168]
 gi|284926817|gb|ADC29169.1| riboflavin-specific deaminase/reductase [Campylobacter jejuni
           subsp. jejuni IA3902]
          Length = 336

 Score = 70.3 bits (172), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 40/177 (22%), Positives = 64/177 (36%), Gaps = 44/177 (24%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAV-LNNKIIS-RAGNRNRELKDVTAHAE 55
           MK    +M+ AL EA         P   VG V +  N KI++ +A       K   AHAE
Sbjct: 11  MK--EFYMNLALNEAWK-YQFLTYPNPAVGCVILDKNEKILAIKAH-----EKAGLAHAE 62

Query: 56  ILAIRMGCRILSQEI--------------------LPEVDLYVTLEPC------TMCAAA 89
           + AI    + L  EI                      +   +VTLEPC        CA  
Sbjct: 63  LNAIAHAFKSLRPEISLPKEANALHEFICKNHQGVFKDSIAFVTLEPCSHQGKTPPCAKL 122

Query: 90  ISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
            S    ++++    +        G +F          E+   I ++  +++++ F K
Sbjct: 123 FSELGFKKIFISVKDENKIASG-GAEFLKKQG----IEVEFDILKEEGKKLLKPFLK 174


>gi|86149383|ref|ZP_01067614.1| riboflavin biosynthesis protein RibD [Campylobacter jejuni subsp.
           jejuni CF93-6]
 gi|88596073|ref|ZP_01099310.1| riboflavin biosynthesis protein RibD [Campylobacter jejuni subsp.
           jejuni 84-25]
 gi|85840165|gb|EAQ57423.1| riboflavin biosynthesis protein RibD [Campylobacter jejuni subsp.
           jejuni CF93-6]
 gi|88190914|gb|EAQ94886.1| riboflavin biosynthesis protein RibD [Campylobacter jejuni subsp.
           jejuni 84-25]
          Length = 326

 Score = 70.3 bits (172), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 40/177 (22%), Positives = 64/177 (36%), Gaps = 44/177 (24%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAV-LNNKIIS-RAGNRNRELKDVTAHAE 55
           MK    +M+ AL EA         P   VG V +  N KI++ +A       K   AHAE
Sbjct: 1   MK--EFYMNLALNEAWK-YQFLTYPNPAVGCVILDKNEKILAIKAH-----EKAGLAHAE 52

Query: 56  ILAIRMGCRILSQEI--------------------LPEVDLYVTLEPC------TMCAAA 89
           + AI    + L  EI                      +   +VTLEPC        CA  
Sbjct: 53  LNAIAHAFKSLRPEISLPKEANALHEFICKNHQGVFKDSIAFVTLEPCSHQGKTPPCAKL 112

Query: 90  ISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
            S    ++++    +        G +F          E+   I ++  +++++ F K
Sbjct: 113 FSELGFKKIFISVKDENKIASG-GAEFLKKQG----IEVEFDILKEEGKKLLKPFLK 164


>gi|270684433|ref|ZP_06222817.1| riboflavin biosynthesis protein RibD [Haemophilus influenzae
          HK1212]
 gi|270316231|gb|EFA28189.1| riboflavin biosynthesis protein RibD [Haemophilus influenzae
          HK1212]
          Length = 94

 Score = 70.3 bits (172), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 27/98 (27%), Positives = 36/98 (36%), Gaps = 17/98 (17%)

Query: 2  KKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
           +  VFM  AL+ A          P VG V V N +I+    +   +      HAE +A+
Sbjct: 6  SQDCVFMQRALDLAAKGQYTTTPNPSVGCVLVKNGEIVGEGFH--FKAGQP--HAERVAL 61

Query: 60 RMGCRILSQEILPEVDLYVTLEPC------TMCAAAIS 91
                   E       YVTLEPC        CA  + 
Sbjct: 62 AQAG-----ENAKGATAYVTLEPCSHYGRTPPCALGLI 94


>gi|56421051|ref|YP_148369.1| late competence DNA binding and uptake protein [Geobacillus
           kaustophilus HTA426]
 gi|56380893|dbj|BAD76801.1| late competence protein (DNA binding and uptake) [Geobacillus
           kaustophilus HTA426]
          Length = 156

 Score = 70.3 bits (172), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 29/116 (25%), Positives = 44/116 (37%), Gaps = 18/116 (15%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELK-----------D 49
           +     FM+ +   A  +     + VGA  V + +II+   N +               D
Sbjct: 4   ITWDQYFMAQSHLLALRSTCTR-LAVGATIVRDKRIIAGGYNGSIAGGAHCTDEGCYVID 62

Query: 50  V----TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
                T HAE+ AI    +          ++YVT  PC  C  AI  + IR +YY 
Sbjct: 63  GHCVRTIHAEMNAILQCAKFGVPT--EGAEMYVTHFPCLHCCKAIIQSGIRAVYYA 116


>gi|283957008|ref|ZP_06374480.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Campylobacter jejuni subsp. jejuni 1336]
 gi|283791509|gb|EFC30306.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Campylobacter jejuni subsp. jejuni 1336]
          Length = 326

 Score = 70.3 bits (172), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 41/177 (23%), Positives = 65/177 (36%), Gaps = 44/177 (24%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAV-LNNKIIS-RAGNRNRELKDVTAHAE 55
           MKK   +M+ AL EA         P   VG V +  N KI++ +A       K   AHAE
Sbjct: 1   MKK--FYMNLALNEAWK-YQFLTYPNPAVGCVILDKNEKILAIKAH-----EKAGLAHAE 52

Query: 56  ILAIRMGCRILSQEI--------------------LPEVDLYVTLEPC------TMCAAA 89
           + AI    + L  EI                      +   +VTLEPC        CA  
Sbjct: 53  LNAIAHAFKSLRPEISLPKEANALHEFICKNHQGVFKDSIAFVTLEPCSHQGKTPPCAKL 112

Query: 90  ISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
            S    ++++    +        G +F          E+   I ++  +++++ F K
Sbjct: 113 FSELGFKKIFISVKDENKIASG-GAEFLKKQG----IEVEFDILKEEGKKLLKPFLK 164


>gi|209548782|ref|YP_002280699.1| riboflavin biosynthesis protein RibD [Rhizobium leguminosarum bv.
           trifolii WSM2304]
 gi|209534538|gb|ACI54473.1| riboflavin biosynthesis protein RibD [Rhizobium leguminosarum bv.
           trifolii WSM2304]
          Length = 404

 Score = 70.3 bits (172), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 27/139 (19%), Positives = 44/139 (31%), Gaps = 21/139 (15%)

Query: 4   GNVFMSCALEEAQN--AALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
              FM+ A+  ++           VG + V +  ++ +A            HAE      
Sbjct: 7   DESFMAAAIRLSRRHLGRTATNPSVGCLIVRDGVVVGQAVTAVGGR----PHAEPQ---- 58

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
                +         YVTLEPC        CA A+    + R+    ++P       G  
Sbjct: 59  -ALAEAGAAARGATAYVTLEPCSHHGKTPPCAEALIAYGVARVVISVTDPDPRVSGRGIA 117

Query: 116 FYTLATCHHSPEIYPGISE 134
               A      E+  G+ E
Sbjct: 118 MLREAG----IEVDAGVLE 132


>gi|313229170|emb|CBY23755.1| unnamed protein product [Oikopleura dioica]
          Length = 123

 Score = 70.3 bits (172), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 25/89 (28%), Positives = 44/89 (49%), Gaps = 1/89 (1%)

Query: 48  KDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKG 107
           K+   HA +  +      + + IL  +++Y+  EPC MC+ A+S +RI+RL+Y       
Sbjct: 28  KNPLGHAALNLVAKAA-GMGEYILTGLEVYMYREPCLMCSMALSHSRIKRLFYLKKCGTD 86

Query: 108 GGIENGTQFYTLATCHHSPEIYPGISEQR 136
           G        +TL   +H  +++ G  E R
Sbjct: 87  GSCGTRESIHTLPALNHRFQVFYGGFEDR 115


>gi|329946974|ref|ZP_08294386.1| riboflavin biosynthesis protein RibD [Actinomyces sp. oral taxon
           170 str. F0386]
 gi|328526785|gb|EGF53798.1| riboflavin biosynthesis protein RibD [Actinomyces sp. oral taxon
           170 str. F0386]
          Length = 400

 Score = 70.3 bits (172), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 24/127 (18%), Positives = 44/127 (34%), Gaps = 18/127 (14%)

Query: 26  VGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84
           VG V +  +  +++   +R       TAHAE+ A+       +          VTLEPC 
Sbjct: 46  VGCVILSADGDVLAEGHHR----GAGTAHAEVDALTNLAAAGASA--QGTTAVVTLEPCD 99

Query: 85  M------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSR 138
                  C  A+  A +  + Y   +P                      +  G+  Q + 
Sbjct: 100 HEGRTGPCVQALLAAGVAEVIYAQDDPTEQAGGGAATLEAA-----GVRVRRGLCSQDAA 154

Query: 139 QIIQDFF 145
           ++ + +F
Sbjct: 155 RLNRPWF 161


>gi|328709609|ref|XP_001952788.2| PREDICTED: hypothetical protein LOC100161474 [Acyrthosiphon pisum]
          Length = 373

 Score = 69.9 bits (171), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 33/126 (26%), Positives = 47/126 (37%), Gaps = 30/126 (23%)

Query: 5   NVFMSCALEEAQNAALRNEIPV---GAVAV-LNNKIISRAGN---------------RNR 45
           N+FM+ A   A  +      PV   GA  V  +N I+    N                  
Sbjct: 221 NLFMAIAYLTAMRSKD----PVCQVGACIVNSDNTIVGTGYNGMPTGCNDDEFPWGNNKN 276

Query: 46  ELKDV---TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGA 102
              +      HAE+ A+       S   + +  LYVT  PC  CA  I  + I+ + Y  
Sbjct: 277 LTLNKFIYVCHAEMNAV---FYKSSMINVKDCTLYVTRFPCIECAKIIIQSGIKEVVY-L 332

Query: 103 SNPKGG 108
           +NPK G
Sbjct: 333 TNPKYG 338



 Score = 68.8 bits (168), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 24/112 (21%), Positives = 44/112 (39%), Gaps = 19/112 (16%)

Query: 1   MKKGNVFMSCALEEAQ--NAALRNEIPVGAVAVLNNK-IISRAGNRNRELKD-------- 49
           +   ++FM+ A   A+      +    VGA  V ++K I+    N      +        
Sbjct: 68  LSWDDLFMAIAFLTAKCNKDLKKK---VGACIVDSDKKIVGIGYNGMPTGCNNGNFLDHK 124

Query: 50  -VTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
               HAE+ AI       +   +    ++V+L PC+  A  I  + I+ + Y
Sbjct: 125 FAQCHAEMNAILN----KNSIHIQNCTIFVSLYPCSEAAKIIIQSGIKEVVY 172


>gi|304437889|ref|ZP_07397836.1| competence protein ComEB [Selenomonas sp. oral taxon 149 str.
           67H29BP]
 gi|304369111|gb|EFM22789.1| competence protein ComEB [Selenomonas sp. oral taxon 149 str.
           67H29BP]
          Length = 158

 Score = 69.9 bits (171), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 32/134 (23%), Positives = 44/134 (32%), Gaps = 33/134 (24%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNK-IISRAGNRNRELKD------- 49
           +     FM  AL  A  +      P   VGA  V  +K I+    N      D       
Sbjct: 3   ISWDEYFMGVALFSAYRSKD----PHTQVGACIVNEDKHIVGVGYNGMPNGCDDHEYPWG 58

Query: 50  VTA-----------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98
            T            HAE+ AI           L    +Y +L PC  C  AI  + IR +
Sbjct: 59  RTGEFAEQKYPYVVHAELNAILNA-----STSLKGCRIYTSLFPCNECCKAIIQSGIREV 113

Query: 99  YYGASNPKGGGIEN 112
            Y   + K    ++
Sbjct: 114 IY--LSDKYAAADS 125


>gi|330796315|ref|XP_003286213.1| hypothetical protein DICPUDRAFT_30558 [Dictyostelium purpureum]
 gi|325083800|gb|EGC37243.1| hypothetical protein DICPUDRAFT_30558 [Dictyostelium purpureum]
          Length = 226

 Score = 69.9 bits (171), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 25/122 (20%), Positives = 44/122 (36%), Gaps = 15/122 (12%)

Query: 33  NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISL 92
           N  ++    N      ++ +H EI+AI     +    +     LY T EPC MCA A+  
Sbjct: 89  NGTLMCTGVNM--GKPNIISHGEIVAINNCTELHGITVFTNYTLYTTGEPCAMCAGALVW 146

Query: 93  ARIRRLYYGASNPKGGG--------IENGTQFYTLATCH-HSPEIYPGISEQRSRQIIQD 143
           A  + + +G  N             +++   F         S  +  G+   ++      
Sbjct: 147 ADFKTVVWGTYNSDLLCKICMSNIPMDSAYIFGRSYGLRSSSTTLIGGVRRAQADA---- 202

Query: 144 FF 145
           FF
Sbjct: 203 FF 204


>gi|219118282|ref|XP_002179919.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217408972|gb|EEC48905.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 123

 Score = 69.9 bits (171), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 26/120 (21%), Positives = 40/120 (33%), Gaps = 14/120 (11%)

Query: 8   MSCALEEAQNAALRN-EIPVGAVAVLNN------KIISRAGNRNRELKDVTAHAEILAIR 60
           M+ A+E ++         P G      +      +I S   NR   L + + H E+ A++
Sbjct: 3   MAVAVEISRLNVEHKSGGPFGCAIFERDLSTNTCRIFSVGANRVMPLHNSSLHGEMTALQ 62

Query: 61  MGCRILSQEILP-------EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENG 113
              R L    L        E  +  + EPC  C      A    +  GAS      I   
Sbjct: 63  FAERKLQHFSLKTEKDSPKEYVMCTSCEPCAQCLGGTLWAGPAEMICGASKDDAEAIGFN 122


>gi|15643170|ref|NP_228214.1| deoxycytidylate deaminase, putative [Thermotoga maritima MSB8]
 gi|4980909|gb|AAD35489.1|AE001720_3 deoxycytidylate deaminase, putative [Thermotoga maritima MSB8]
          Length = 201

 Score = 69.9 bits (171), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 27/120 (22%), Positives = 48/120 (40%), Gaps = 26/120 (21%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNR-------NRELKDVTA---- 52
            + FM  A   ++ +       VGAV V +++I++   N+         E+  +      
Sbjct: 57  DSYFMRIARMVSERSTCV-HRKVGAVIVKDHRILATGYNQPPSKFPHCNEIGCIRDDLEI 115

Query: 53  ------------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
                       HAE  A+    +      +    +YVT +PC++CA  I  A I+R+ Y
Sbjct: 116 NSGEHQEICYALHAEQNALMQAAKFGIA--VNGATIYVTHKPCSICARLIVNAGIKRVVY 173


>gi|295399242|ref|ZP_06809224.1| ComE operon protein 2 [Geobacillus thermoglucosidasius C56-YS93]
 gi|312110156|ref|YP_003988472.1| ComE operon protein 2 [Geobacillus sp. Y4.1MC1]
 gi|294978708|gb|EFG54304.1| ComE operon protein 2 [Geobacillus thermoglucosidasius C56-YS93]
 gi|311215257|gb|ADP73861.1| ComE operon protein 2 [Geobacillus sp. Y4.1MC1]
          Length = 151

 Score = 69.9 bits (171), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 29/116 (25%), Positives = 44/116 (37%), Gaps = 18/116 (15%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELK-----------D 49
           +     FM+ +   A  +     + VGA  V + +II+   N +               D
Sbjct: 4   ITWDQYFMAQSHLLALRSTCTR-LAVGATIVRDKRIIAGGYNGSIAGGAHCIDEGCYIID 62

Query: 50  V----TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
                T HAE+ AI    +          ++YVT  PC  C  AI  + IR +YY 
Sbjct: 63  GHCVRTIHAEMNAIIQCAKFGVPT--EGAEMYVTHFPCLHCCKAIIQSGIRAVYYA 116


>gi|212638664|ref|YP_002315184.1| Late competence protein ComEB [Anoxybacillus flavithermus WK1]
 gi|212560144|gb|ACJ33199.1| Late competence protein ComEB (DNA binding and uptake)
           [Anoxybacillus flavithermus WK1]
          Length = 155

 Score = 69.9 bits (171), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 27/116 (23%), Positives = 43/116 (37%), Gaps = 18/116 (15%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKD----------- 49
           +     FM+ +   A  +     + VGA  V + +II+   N +                
Sbjct: 4   ITWDQYFMAQSHLLALRSTCTR-LAVGATIVRDKRIIAGGYNGSIAGGAHCIDEGCYVID 62

Query: 50  ----VTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
                T HAE+ AI    +          ++YVT  PC  C  AI  + I+ +YY 
Sbjct: 63  NHCVRTIHAEMNAILQCAKFGVPT--EGAEIYVTHFPCLQCCKAIIQSGIKAVYYA 116


>gi|312863405|ref|ZP_07723643.1| putative ComE operon protein 2 [Streptococcus vestibularis F0396]
 gi|322516047|ref|ZP_08068984.1| competence protein comEB [Streptococcus vestibularis ATCC 49124]
 gi|311100941|gb|EFQ59146.1| putative ComE operon protein 2 [Streptococcus vestibularis F0396]
 gi|322125462|gb|EFX96808.1| competence protein comEB [Streptococcus vestibularis ATCC 49124]
          Length = 151

 Score = 69.9 bits (171), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 32/122 (26%), Positives = 46/122 (37%), Gaps = 18/122 (14%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKD---------------VTAHAEILAIRMGCRILSQEI 70
           VGAV V +N+II+   N      D                T HAE+ A+    +      
Sbjct: 29  VGAVLVKDNRIIATGYNGGVSETDNCNEVGHYMEDGHCIRTVHAEMNALIQCAKEGIST- 87

Query: 71  LPEVDLYVTLEPCTMCAAAISLARIRRLYY-GASNPKGGGIENGTQFYTLATCHHSPEIY 129
               ++YVT  PC  C  A+  A + ++ Y     P    IE   Q       H  PE++
Sbjct: 88  -KNTEIYVTHFPCINCTKALLQAGVVKITYKANYRPHAFAIELMEQKGVSYVQHDVPEVH 146

Query: 130 PG 131
            G
Sbjct: 147 LG 148


>gi|298675909|ref|YP_003727659.1| CMP/dCMP deaminase zinc-binding protein [Methanohalobium
           evestigatum Z-7303]
 gi|298288897|gb|ADI74863.1| CMP/dCMP deaminase zinc-binding protein [Methanohalobium
           evestigatum Z-7303]
          Length = 155

 Score = 69.9 bits (171), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 30/136 (22%), Positives = 44/136 (32%), Gaps = 28/136 (20%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGN--------------------- 42
              F+  A   A+ A       VGAV V + +IIS   N                     
Sbjct: 11  DEYFLEIASVVAKRATCLRNK-VGAVIVRDKRIISTGYNGAPSNLEHCLDIGCIRQQYNI 69

Query: 43  ---RNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLY 99
                 E      HAE  AI                +Y T +PC +CA  I  A I+++ 
Sbjct: 70  ESGTQHEKCRAV-HAEQNAIIQAALHGVSTD--NATIYCTHQPCILCAKMIINANIKKVI 126

Query: 100 YGASNPKGGGIENGTQ 115
           Y +  P    ++  + 
Sbjct: 127 YFSDYPDDEALKFLSD 142


>gi|241955527|ref|XP_002420484.1| DRAP deaminase, putative; pseudouridine synthase, putative [Candida
           dubliniensis CD36]
 gi|223643826|emb|CAX41563.1| DRAP deaminase, putative [Candida dubliniensis CD36]
          Length = 589

 Score = 69.9 bits (171), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 34/151 (22%), Positives = 58/151 (38%), Gaps = 20/151 (13%)

Query: 6   VFMSCALEEAQN-AALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
            FM  A++EA+     + +  VG V V N ++IS   +R         HAE  A+     
Sbjct: 439 KFMEMAIKEAEKCGKTQTQFNVGCVLVHNGQVISTGHSRELPGN---THAEQCALEKYFS 495

Query: 65  ILSQEI--LPEVDLYVTLEPC-------TMCAAAISLAR-IRRLYYGASNPKGGGIENGT 114
               E       +++ ++EPC         C   I   + I+  + G   P    ++N +
Sbjct: 496 KNGGEREVPSGTEIFTSMEPCSLRLSGNLPCVDRILQTKSIKTCFVGVLEPDI-FVKNNS 554

Query: 115 QFYTLATCHHSPEI--YPGISEQRSRQIIQD 143
            +  L    H  E    PG  E+   +I + 
Sbjct: 555 SYKKL--LDHGVEYIHIPGY-EETCLEIAKR 582


>gi|239827788|ref|YP_002950412.1| ComE operon protein 2 [Geobacillus sp. WCH70]
 gi|239808081|gb|ACS25146.1| ComE operon protein 2 [Geobacillus sp. WCH70]
          Length = 151

 Score = 69.9 bits (171), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 29/116 (25%), Positives = 44/116 (37%), Gaps = 18/116 (15%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELK-----------D 49
           +     FM+ +   A  +     + VGA  V + +II+   N +               D
Sbjct: 4   ITWDQYFMAQSHLLALRSTCTR-LAVGATIVRDKRIIAGGYNGSIAGGAHCIDEGCYVID 62

Query: 50  V----TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
                T HAE+ AI    +          ++YVT  PC  C  AI  + IR +YY 
Sbjct: 63  GHCVRTIHAEMNAIIQCAKFGVPT--EGAEMYVTHFPCLHCCKAIIQSGIRAVYYA 116


>gi|161506809|ref|YP_001576763.1| dCMP deaminase [Lactobacillus helveticus DPC 4571]
 gi|260102228|ref|ZP_05752465.1| cytidine/deoxycytidylate deaminase [Lactobacillus helveticus DSM
           20075]
 gi|160347798|gb|ABX26472.1| DCMP deaminase [Lactobacillus helveticus DPC 4571]
 gi|260083969|gb|EEW68089.1| cytidine/deoxycytidylate deaminase [Lactobacillus helveticus DSM
           20075]
          Length = 159

 Score = 69.9 bits (171), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 28/111 (25%), Positives = 47/111 (42%), Gaps = 18/111 (16%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELK-----------DV--- 50
             FM  AL  AQ +     + VG+V V +N+II    N +   +           D    
Sbjct: 9   QYFMMQALVIAQRSTCNRAL-VGSVLVKDNRIIGTGYNGSVSGQPHCDEVGHQMVDGHCV 67

Query: 51  -TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
            T H+E+ AI    +        + ++YVT  PC  C  ++  A ++++ Y
Sbjct: 68  RTIHSEMNAIIQCAKFGVSTD--DTEIYVTHFPCYNCCKSLFQAGVKKINY 116


>gi|156096476|ref|XP_001614272.1| hypothetical protein [Plasmodium vivax SaI-1]
 gi|148803146|gb|EDL44545.1| hypothetical protein, conserved [Plasmodium vivax]
          Length = 245

 Score = 69.9 bits (171), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 23/79 (29%), Positives = 36/79 (45%)

Query: 69  EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEI 128
           E L    + VT EPC MC  A+ L  I+ +Y+   N + GG  +    +      +   I
Sbjct: 152 ESLRNCCIVVTCEPCIMCVYALKLMGIKDIYFCCLNERFGGCGSVLSLHKTYQDINVNYI 211

Query: 129 YPGISEQRSRQIIQDFFKE 147
             G   +RS  ++Q F+K 
Sbjct: 212 KTGGCTERSISLMQSFYKA 230



 Score = 51.4 bits (123), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 17/58 (29%), Positives = 32/58 (55%), Gaps = 3/58 (5%)

Query: 7  FMSCALEEAQNA--ALRNEIPVGAVAVLNN-KIISRAGNRNRELKDVTAHAEILAIRM 61
          F++ AL EA+ +  A   E+P+  + +    +I+S + N   E K+ + H E++AI  
Sbjct: 12 FLNIALGEAEKSLQAELKEMPIFCLLINEQREILSSSYNHTNESKNGSRHCELIAIDK 69


>gi|50555826|ref|XP_505321.1| YALI0F12199p [Yarrowia lipolytica]
 gi|49651191|emb|CAG78128.1| YALI0F12199p [Yarrowia lipolytica]
          Length = 605

 Score = 69.9 bits (171), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 28/115 (24%), Positives = 44/115 (38%), Gaps = 18/115 (15%)

Query: 4   GNVFMSCALEEAQNAALRNEIP----VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
              FM  A+ EA  +      P    VGAV V + +++    +R         HAE  A+
Sbjct: 457 HKKFMDLAVAEADKSE---GTPSAFCVGAVLVKDGQVLETGFSRELPGN---THAEQCAL 510

Query: 60  RMGCRILSQEILPE-VDLYVTLEPC-------TMCAAAISLARIRRLYYGASNPK 106
                  +   +PE   +Y T+EPC         C   I  + I+ ++ G   P 
Sbjct: 511 EKYFAKNNVSDVPENTVIYTTMEPCSERLSGNLPCVDRILNSSIKTVFVGVLEPD 565


>gi|148543876|ref|YP_001271246.1| ComE operon protein 2 [Lactobacillus reuteri DSM 20016]
 gi|184153276|ref|YP_001841617.1| dCMP deaminase [Lactobacillus reuteri JCM 1112]
 gi|194468431|ref|ZP_03074417.1| ComE operon protein 2 [Lactobacillus reuteri 100-23]
 gi|227364782|ref|ZP_03848831.1| competence protein ComEB [Lactobacillus reuteri MM2-3]
 gi|227545004|ref|ZP_03975053.1| competence protein ComEB [Lactobacillus reuteri CF48-3A]
 gi|300909961|ref|ZP_07127421.1| ComE operon protein comEB [Lactobacillus reuteri SD2112]
 gi|325682591|ref|ZP_08162108.1| competence protein comEB [Lactobacillus reuteri MM4-1A]
 gi|148530910|gb|ABQ82909.1| ComE operon protein 2 [Lactobacillus reuteri DSM 20016]
 gi|183224620|dbj|BAG25137.1| dCMP deaminase [Lactobacillus reuteri JCM 1112]
 gi|194453284|gb|EDX42182.1| ComE operon protein 2 [Lactobacillus reuteri 100-23]
 gi|227070241|gb|EEI08615.1| competence protein ComEB [Lactobacillus reuteri MM2-3]
 gi|227185021|gb|EEI65092.1| competence protein ComEB [Lactobacillus reuteri CF48-3A]
 gi|300892609|gb|EFK85969.1| ComE operon protein comEB [Lactobacillus reuteri SD2112]
 gi|324978430|gb|EGC15380.1| competence protein comEB [Lactobacillus reuteri MM4-1A]
          Length = 161

 Score = 69.9 bits (171), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 27/115 (23%), Positives = 43/115 (37%), Gaps = 18/115 (15%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRE-----------LKD 49
           +     FM  A   A  +     + VGAV V + +II+   N +             L+D
Sbjct: 5   IDWDQYFMIQAALLASRSTCNR-LSVGAVLVRDKRIIAGGYNGSVAGDAHCIDEGCYLRD 63

Query: 50  V----TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
                T HAE+ A+    +           +YVT  PC  C  ++    I+ + Y
Sbjct: 64  GHCVRTIHAEMNALLQCAKFGISAD--GASIYVTDFPCLQCTKSLLQTGIKEINY 116


>gi|329117421|ref|ZP_08246138.1| putative ComE operon protein 2 [Streptococcus parauberis NCFD 2020]
 gi|326907826|gb|EGE54740.1| putative ComE operon protein 2 [Streptococcus parauberis NCFD 2020]
          Length = 153

 Score = 69.9 bits (171), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 34/122 (27%), Positives = 46/122 (37%), Gaps = 18/122 (14%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKD---------------VTAHAEILAIRMGCRILSQEI 70
           VGAV V +N+II+   N      D                T HAE+ A+    +      
Sbjct: 29  VGAVLVKDNRIIATGYNGGVSATDNCDEAGHYMEDGHCIRTVHAEMNALIQCAKEGIST- 87

Query: 71  LPEVDLYVTLEPCTMCAAAISLARIRRLYY-GASNPKGGGIENGTQFYTLATCHHSPEIY 129
               +LYVT  PC  C  A+  A I+ + Y     P    IE   +   +   H  PEI 
Sbjct: 88  -AGTELYVTHFPCINCTKALLQAGIKAITYKAHYRPHPFAIELMEKKGVVYQQHDVPEIK 146

Query: 130 PG 131
            G
Sbjct: 147 LG 148


>gi|322373694|ref|ZP_08048230.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus
           sp. C150]
 gi|321278736|gb|EFX55805.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus
           sp. C150]
          Length = 151

 Score = 69.9 bits (171), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 32/122 (26%), Positives = 47/122 (38%), Gaps = 18/122 (14%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKD---------------VTAHAEILAIRMGCRILSQEI 70
           VGAV V +N+II+   N      D                T HAE+ A+    +      
Sbjct: 29  VGAVLVKDNRIIATGYNGGVSETDNCNEVGHYMEDGHCIRTVHAEMNALIQCAKEGIST- 87

Query: 71  LPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH-SPEIY 129
               ++YVT  PC  C  A+  A I ++ Y A+    G      Q   ++   H  PE+ 
Sbjct: 88  -KNTEIYVTHFPCINCTKALLQAGIVKITYKANYRPHGFAMELMQQKGVSYVQHDVPEVR 146

Query: 130 PG 131
            G
Sbjct: 147 LG 148


>gi|327403586|ref|YP_004344424.1| CMP/dCMP deaminase zinc-binding protein [Fluviicola taffensis DSM
           16823]
 gi|327319094|gb|AEA43586.1| CMP/dCMP deaminase zinc-binding protein [Fluviicola taffensis DSM
           16823]
          Length = 150

 Score = 69.9 bits (171), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 28/109 (25%), Positives = 44/109 (40%), Gaps = 15/109 (13%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGN-------RNRELKDV-----T 51
              ++  A   A+ +    +  VGA+ V + +IIS   N          E ++       
Sbjct: 18  DKAYLRMAQTWAELSHCERKK-VGALIVRDGRIISDGYNGTPAGFENCCEDQNGNTQWYV 76

Query: 52  AHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
            HAE  AI    R  S        L++TL PC  C+  +  A I+R+ Y
Sbjct: 77  LHAEANAILKVAR--STNDCSGATLFITLSPCKDCSKLVLQAGIKRVVY 123


>gi|229543791|ref|ZP_04432851.1| ComE operon protein 2 [Bacillus coagulans 36D1]
 gi|229328211|gb|EEN93886.1| ComE operon protein 2 [Bacillus coagulans 36D1]
          Length = 200

 Score = 69.9 bits (171), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 27/91 (29%), Positives = 36/91 (39%), Gaps = 17/91 (18%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKD---------------VTAHAEILAIRMGCRILSQEI 70
           VGA  V + +II+   N +    +                T HAE+ AI    +      
Sbjct: 28  VGATIVRDKRIIAGGYNGSIAGDEHCIDKGCYVIDGHCVRTIHAEMNAILQCAKFGVATN 87

Query: 71  LPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
               DLYVT  PC  C  AI  A I+ +YY 
Sbjct: 88  --GADLYVTHYPCLHCTKAIIQAGIQNVYYA 116


>gi|256072191|ref|XP_002572420.1| deoxycytidylate deaminase [Schistosoma mansoni]
 gi|238657578|emb|CAZ28651.1| deoxycytidylate deaminase, putative [Schistosoma mansoni]
          Length = 175

 Score = 69.9 bits (171), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 34/131 (25%), Positives = 44/131 (33%), Gaps = 32/131 (24%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAV-LNNKIISRAGN---RNRELKDVTA- 52
           +     FMS AL  A  +      P   VGA  V    KI+    N         DV   
Sbjct: 21  ISWDEYFMSIALLSAMRSKD----PSTQVGACIVNQEKKIVGIGYNGMPNGILDDDVPWG 76

Query: 53  ---------------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRR 97
                          HAE+ A+       S        L+ T+ PC  CA  I  A I+ 
Sbjct: 77  KGSANELENKYLYVCHAELNAVLNRNEAHSG----GCTLFTTMFPCNECAKVIIQAGIKE 132

Query: 98  LYYGASNPKGG 108
           + Y  S+ K G
Sbjct: 133 VVY-YSDKKNG 142


>gi|146096702|ref|XP_001467899.1| hypothetical protein [Leishmania infantum JPCM5]
 gi|134072265|emb|CAM70970.1| conserved hypothetical protein [Leishmania infantum JPCM5]
          Length = 542

 Score = 69.9 bits (171), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 21/69 (30%), Positives = 36/69 (52%), Gaps = 3/69 (4%)

Query: 72  PEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPG 131
             +DLYVT EPC MCA A+  +RI R+++   N   GG+ +    + +A+ +H    Y  
Sbjct: 473 NGLDLYVTHEPCVMCAMALVHSRIHRVFFLFRNAVHGGLGSRYNLHLMASLNHHFSAYEC 532

Query: 132 ISEQRSRQI 140
                + ++
Sbjct: 533 ---TEAAEL 538


>gi|319442108|ref|ZP_07991264.1| diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           [Corynebacterium variabile DSM 44702]
          Length = 353

 Score = 69.9 bits (171), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 29/124 (23%), Positives = 42/124 (33%), Gaps = 21/124 (16%)

Query: 14  EAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILP 72
           +A         PVGAV +  +  ++   G           HAE+ A+             
Sbjct: 28  QAVRGTTSPNPPVGAVILSVDGDVVGTGGTSPVGG----PHAEVNALAEAGEKA-----R 78

Query: 73  EVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
                VTLEPC        CA A+  A I R+ Y  ++P G     G +F       H  
Sbjct: 79  GGTAVVTLEPCNHTGRTGPCALALLEAGIARVVYAFADP-GDAEGGGAEFLRS----HGV 133

Query: 127 EIYP 130
            +  
Sbjct: 134 PVTG 137


>gi|157363614|ref|YP_001470381.1| CMP/dCMP deaminase zinc-binding [Thermotoga lettingae TMO]
 gi|157314218|gb|ABV33317.1| CMP/dCMP deaminase zinc-binding [Thermotoga lettingae TMO]
          Length = 186

 Score = 69.9 bits (171), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 27/120 (22%), Positives = 41/120 (34%), Gaps = 26/120 (21%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRN---RELKDVTA-------- 52
              FM       + +       VGAV V  N+I++   N+        D T         
Sbjct: 35  DEYFMRICYIVKERSTCT-HRKVGAVIVRENRILATGYNQPPSAFPHCDSTGCIRDHLRI 93

Query: 53  ------------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
                       HAE  A+    +           +YVT +PC++CA  +  A I R+ Y
Sbjct: 94  PSGQNQEICYALHAEQNALMQAAKFGISTN--GATMYVTTKPCSVCARLLVNAGITRVVY 151


>gi|325570545|ref|ZP_08146271.1| competence protein comEB [Enterococcus casseliflavus ATCC 12755]
 gi|325156391|gb|EGC68571.1| competence protein comEB [Enterococcus casseliflavus ATCC 12755]
          Length = 165

 Score = 69.9 bits (171), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 27/113 (23%), Positives = 46/113 (40%), Gaps = 20/113 (17%)

Query: 4   GNVFMSCALEEAQNAA-LRNEIPVGAVAVLNNKIISRAGNRNRE---------------L 47
              FM+ A+  +  +   R E  VGA  V + +II+   N +                  
Sbjct: 9   DQYFMAQAVLLSLRSTCSRLE--VGATLVKDRRIIAGGYNGSVSGDVHCIDDGCYVVDDH 66

Query: 48  KDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
              T HAE+ A+    ++         ++YVT  PC  C  AI  A +++++Y
Sbjct: 67  CIRTIHAEMNALLQCAKLGVSTD--NAEIYVTHFPCLPCTKAILQAGVKKIHY 117


>gi|66802007|ref|XP_629827.1| hypothetical protein DDB_G0292096 [Dictyostelium discoideum AX4]
 gi|60463211|gb|EAL61404.1| hypothetical protein DDB_G0292096 [Dictyostelium discoideum AX4]
          Length = 321

 Score = 69.9 bits (171), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 19/98 (19%), Positives = 35/98 (35%), Gaps = 9/98 (9%)

Query: 49  DVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGG 108
           ++ +H EI+AI     +          LY + EPC MC+AA+  A  + + +G  N    
Sbjct: 103 NIISHGEIVAINNCTALHGITSFTNYTLYTSGEPCAMCSAALLWADFKTIVWGTFNSDLL 162

Query: 109 G--IENGTQFYTLATCHHS-------PEIYPGISEQRS 137
                +     +              P +  G+    +
Sbjct: 163 CKICMSNIPMDSSYIFGRYYGLRASPPRVIGGVLRTEA 200


>gi|322501868|emb|CBZ36951.1| unnamed protein product [Leishmania donovani BPK282A1]
          Length = 542

 Score = 69.9 bits (171), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 21/69 (30%), Positives = 36/69 (52%), Gaps = 3/69 (4%)

Query: 72  PEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPG 131
             +DLYVT EPC MCA A+  +RI R+++   N   GG+ +    + +A+ +H    Y  
Sbjct: 473 NGLDLYVTHEPCVMCAMALVHSRIHRVFFLFRNAVHGGLGSRYNLHLMASLNHHFSAYEC 532

Query: 132 ISEQRSRQI 140
                + ++
Sbjct: 533 ---TEAAEL 538


>gi|314055285|ref|YP_004063623.1| putative CMP/dCMP deaminase zinc-binding [Ostreococcus tauri virus
           2]
 gi|313575176|emb|CBI70189.1| putative CMP/dCMP deaminase zinc-binding [Ostreococcus tauri virus
           2]
          Length = 136

 Score = 69.9 bits (171), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 27/111 (24%), Positives = 48/111 (43%), Gaps = 14/111 (12%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNR-----------NRELKD 49
           +     FM  A E A   +  + + VG V V NN++IS   N                + 
Sbjct: 5   ISWNEYFMKTA-ELASVRSPCDRLNVGCVLVKNNRLISMGYNGFLGGSNHTSIVRDGHEQ 63

Query: 50  VTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
            T HAEI A+    +      +   ++Y+T  PC  C  A++ + +++++Y
Sbjct: 64  ATIHAEINAVTDAAKRGVS--IDGTEVYITHYPCLNCYKALASSGVKKIHY 112


>gi|294900049|ref|XP_002776874.1| riboflavin-specific deaminase, putative [Perkinsus marinus ATCC
           50983]
 gi|239884075|gb|EER08690.1| riboflavin-specific deaminase, putative [Perkinsus marinus ATCC
           50983]
          Length = 332

 Score = 69.9 bits (171), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 34/157 (21%), Positives = 60/157 (38%), Gaps = 26/157 (16%)

Query: 3   KGNVFMSCALEEAQNAALRNEIP----VGAVAVLNNK-IISRAGNRNRELKDVTAHAEIL 57
               FM  AL E++   +    P    VG + V + + ++ +  +  +       HAE+ 
Sbjct: 10  TDEDFMRMALVESEEGRMT--TPPNPWVGCILVQHGQVVVGKGHHVRKGG----PHAEVN 63

Query: 58  AIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIE 111
           A+R   +  S      +  YVTLEPC        C  A+    + R+  G  +P      
Sbjct: 64  ALRDMIQSGST-----LTAYVTLEPCSHYGSTPPCCEALIEVGVGRVVVGVEDPDPKVSG 118

Query: 112 NGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKER 148
            G Q    A      ++  G      R+ ++ + K+R
Sbjct: 119 RGIQRMREAG----VDVKTGCLTGEIRESLRAYLKQR 151


>gi|323138569|ref|ZP_08073637.1| riboflavin biosynthesis protein RibD [Methylocystis sp. ATCC 49242]
 gi|322396203|gb|EFX98736.1| riboflavin biosynthesis protein RibD [Methylocystis sp. ATCC 49242]
          Length = 376

 Score = 69.9 bits (171), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 32/128 (25%), Positives = 41/128 (32%), Gaps = 17/128 (13%)

Query: 3   KGNVFMSCALEEAQN--AALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
               FM+ AL   +           VGA+ V +  II+R        K    HA      
Sbjct: 12  TDEAFMAAALALGRRNMGRTAPNPAVGALVVRDGIIIARGW----TAKGGRPHA-----E 62

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
                 + E      LYVTLEPC        C  AI  + I R+     +P       G 
Sbjct: 63  AIALAAAGEAARGATLYVTLEPCSHHGSTPPCVDAIIASGIARVVTAMEDPDPRVAGRGH 122

Query: 115 QFYTLATC 122
           Q    A  
Sbjct: 123 QILRDAGI 130


>gi|186681940|ref|YP_001865136.1| CMP/dCMP deaminase, zinc-binding [Nostoc punctiforme PCC 73102]
 gi|186464392|gb|ACC80193.1| CMP/dCMP deaminase, zinc-binding [Nostoc punctiforme PCC 73102]
          Length = 143

 Score = 69.9 bits (171), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 34/143 (23%), Positives = 54/143 (37%), Gaps = 21/143 (14%)

Query: 3   KGNVFMSCALEEAQNAALR--NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
              +FM  AL +++ A        PVG V V   +I+++   +         HAE  A+ 
Sbjct: 2   DNIIFMLAALAQSRKALPECLPNPPVGCVNVDVQEIVAQGYTQVPGKH----HAEADAL- 56

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISL-ARIRRLYYGASNPKGGGIENG 113
              + +  +    + +YVTLEPC        CA AI+   RI  +Y    +P       G
Sbjct: 57  ---KRIQGKGFNFLKMYVTLEPCSFHGRTPACALAIAEDCRIHEIYVSILDPDPRNNGQG 113

Query: 114 TQFYTLATCHHSPEIYPGISEQR 136
                 A       +Y G+    
Sbjct: 114 LDILRKAG----KTVYVGLCANE 132


>gi|158522090|ref|YP_001529960.1| riboflavin biosynthesis protein RibD [Desulfococcus oleovorans
           Hxd3]
 gi|158510916|gb|ABW67883.1| riboflavin biosynthesis protein RibD [Desulfococcus oleovorans
           Hxd3]
          Length = 363

 Score = 69.9 bits (171), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 35/153 (22%), Positives = 57/153 (37%), Gaps = 22/153 (14%)

Query: 3   KGNVFMSCALEEAQN--AALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
               FM+ AL  A+           VGAV V + +++ +  +          HAE++AI 
Sbjct: 2   DDTYFMNMALGLAERGTGFTSPNPVVGAVVVRDGRVVGQGFHAAAGK----PHAEVVAID 57

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
               +         DLYVTLEPC        C   I  A I R+     +        G 
Sbjct: 58  DAGELA-----RGADLYVTLEPCNHTGRTPPCTRKICDAGIARVVVATIDSNPHVAGGGI 112

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
           Q+           +  G+ E  +++ I ++F +
Sbjct: 113 QYLESRG----IAVTVGVCEAEAKKQI-EWFAK 140


>gi|306826735|ref|ZP_07460037.1| competence protein ComEB [Streptococcus pyogenes ATCC 10782]
 gi|304431024|gb|EFM34031.1| competence protein ComEB [Streptococcus pyogenes ATCC 10782]
          Length = 163

 Score = 69.9 bits (171), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 25/90 (27%), Positives = 36/90 (40%), Gaps = 17/90 (18%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKD---------------VTAHAEILAIRMGCRILSQEI 70
           VGAV V +N+II+   N      D                T HAE+ A+    +      
Sbjct: 39  VGAVLVKDNRIIATGYNGGVSATDNCNEAGHYMEDGHCIRTVHAEMNALIQCAKEGISTD 98

Query: 71  LPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
               ++YVT  PC  C  A+  A I ++ Y
Sbjct: 99  --GTEIYVTHFPCINCTKALLQAGITKITY 126


>gi|257869951|ref|ZP_05649604.1| cytidine/deoxycytidylate deaminase [Enterococcus gallinarum EG2]
 gi|257804115|gb|EEV32937.1| cytidine/deoxycytidylate deaminase [Enterococcus gallinarum EG2]
          Length = 180

 Score = 69.9 bits (171), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 27/113 (23%), Positives = 46/113 (40%), Gaps = 20/113 (17%)

Query: 4   GNVFMSCALEEAQNAA-LRNEIPVGAVAVLNNKIISRAGNRNRE---------------L 47
              FM+ A+  +  +   R E  VGA  V + +II+   N +                  
Sbjct: 24  DQYFMAQAVLLSLRSTCSRLE--VGATLVKDRRIIAGGYNGSVSGDVHCIDEGCYVVDGH 81

Query: 48  KDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
              T HAE+ A+    ++         ++YVT  PC  C  AI  A +++++Y
Sbjct: 82  CIRTIHAEMNALLQCAKLGVSTD--NAEIYVTHFPCLPCTKAILQAGVKKIHY 132


>gi|29830662|ref|NP_825296.1| riboflavin/cytosine deaminase [Streptomyces avermitilis MA-4680]
 gi|29607774|dbj|BAC71831.1| putative diaminohydroxyphosphoribosylaminopyrimi dine deaminase
           (N-terminal)/ 5-amino-6-(5-phosphoribosylamino) uracil
           reductase [Streptomyces avermitilis MA-4680]
          Length = 376

 Score = 69.9 bits (171), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 31/128 (24%), Positives = 45/128 (35%), Gaps = 26/128 (20%)

Query: 4   GNVFMSCALEEA------QNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEI 56
              +++ A E A      + A       VGAV V  +   ++R  +R  E  D   HAE 
Sbjct: 231 DRHWLALACELADRCPPSRTAFS-----VGAVIVAADGTELARGHSR--EGGDPVVHAEE 283

Query: 57  LAIRMGCRILSQEILPEVDLYVTLEPCT-------MCAAAISLARIRRLYYGASNPK--- 106
            A+           L    +Y +LEPC         CA  I  A +RR+      P    
Sbjct: 284 AAL--AKLDAEDPRLAGATVYSSLEPCARRTSRPRPCARLILDAGVRRVVTAWREPDTFV 341

Query: 107 GGGIENGT 114
                +G 
Sbjct: 342 AAADGSGV 349


>gi|195427655|ref|XP_002061892.1| GK17242 [Drosophila willistoni]
 gi|194157977|gb|EDW72878.1| GK17242 [Drosophila willistoni]
          Length = 203

 Score = 69.9 bits (171), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 32/120 (26%), Positives = 43/120 (35%), Gaps = 31/120 (25%)

Query: 4   GNVFMSCALEEAQNAALRNEIPV---GAVAV-LNNKIISRAGNR--NRELKDV------- 50
            + FM+ AL  A+ +      PV   GA  V   N+I++   N        DV       
Sbjct: 50  DDYFMAMALLSAKRSKD----PVTQVGACIVDKQNRIVAIGYNGFPRNCSDDVFPWTKNS 105

Query: 51  ----------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
                       HAE  AI       +   L    LY TL PC  C   I  + I+R+ Y
Sbjct: 106 EDSMEDKKLYVVHAEANAILN----SNSTSLVGTCLYTTLFPCNECTKLIIQSGIQRVLY 161


>gi|50284759|ref|XP_444807.1| hypothetical protein [Candida glabrata CBS 138]
 gi|49524109|emb|CAG57698.1| unnamed protein product [Candida glabrata]
          Length = 329

 Score = 69.9 bits (171), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 31/160 (19%), Positives = 62/160 (38%), Gaps = 25/160 (15%)

Query: 1   MKKGNVFMSCALEEAQN-AALRNEIPVGAVAV----LNNKIIS---RAGNRNRELKDVTA 52
           M + N ++    EE++        +P+ +V V      + II+   R+ +    L     
Sbjct: 158 MDEINFYLKIIQEESKRIGKESGSLPIVSVFVDPKFKGDFIIAVDQRSHSEEEHLSLKID 217

Query: 53  HAEILAIRMGCRILSQEI-LPEV------------DLYVTLEPCTMCAAAISLARIRRLY 99
           H+ ++ I        +   L +             D+Y T EPC+MC+ A+  +RI+R  
Sbjct: 218 HSIMVGINKVANTEKKRRSLEDCNNVPQNYLCLDFDVYTTHEPCSMCSMALIHSRIKRCI 277

Query: 100 YGASNPKGGGI----ENGTQFYTLATCHHSPEIYPGISEQ 135
           +     + G +     N    +     +   E+Y  I ++
Sbjct: 278 FIEQMARTGALMANSGNSYCMHANKKLNSKYEVYKWIGDE 317


>gi|149278806|ref|ZP_01884941.1| cytidine/deoxycytidylate deaminase (dCMP deaminase) [Pedobacter sp.
           BAL39]
 gi|149230425|gb|EDM35809.1| cytidine/deoxycytidylate deaminase (dCMP deaminase) [Pedobacter sp.
           BAL39]
          Length = 150

 Score = 69.9 bits (171), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 34/136 (25%), Positives = 52/136 (38%), Gaps = 25/136 (18%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGN--------------------RN 44
           ++FM+ A E A+ +       VGAV   + +IIS   N                     +
Sbjct: 8   HIFMNLASELAERSHCVRAH-VGAVLTKDTRIISIGYNGPPAETHNCDEEWPETGCARDS 66

Query: 45  RELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY--GA 102
           R    +  HAE  AI    +  +   +    LY TL PC  CA  I  + I+ +Y+    
Sbjct: 67  RGSCSLALHAEENAILYASK--NGSKIEGSTLYTTLSPCIACARLILSSGIKLVYFKDSY 124

Query: 103 SNPKGGGIENGTQFYT 118
           +  KG   + G  F  
Sbjct: 125 AEYKGLASDEGVDFLR 140


>gi|225017541|ref|ZP_03706733.1| hypothetical protein CLOSTMETH_01468 [Clostridium methylpentosum
           DSM 5476]
 gi|224949691|gb|EEG30900.1| hypothetical protein CLOSTMETH_01468 [Clostridium methylpentosum
           DSM 5476]
          Length = 145

 Score = 69.9 bits (171), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 37/122 (30%), Positives = 47/122 (38%), Gaps = 32/122 (26%)

Query: 8   MSCALEEAQNAALRNEIP---VGAVAV-LNNKIISRAGN--------------RNRELKD 49
           M  AL  AQ +      P   VGA  V  +NKI+S   N                 E  D
Sbjct: 1   MGIALLSAQRSKD----PNTQVGACIVGQDNKILSLGYNGMPIGCSDDELPWSNQGEALD 56

Query: 50  V----TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNP 105
                  HAE+ AI     + S + L    LY TL PC  CA AI  + I+ + Y  S+ 
Sbjct: 57  TKYLFVCHAELNAI-----LNSGKDLSGAKLYTTLFPCNECAKAIIQSGIKEVVY-CSDK 110

Query: 106 KG 107
             
Sbjct: 111 YA 112


>gi|254168071|ref|ZP_04874919.1| hypothetical protein ABOONEI_218 [Aciduliprofundum boonei T469]
 gi|254168095|ref|ZP_04874942.1| hypothetical protein ABOONEI_712 [Aciduliprofundum boonei T469]
 gi|289596025|ref|YP_003482721.1| CMP/dCMP deaminase zinc-binding protein [Aciduliprofundum boonei
           T469]
 gi|197622861|gb|EDY35429.1| hypothetical protein ABOONEI_712 [Aciduliprofundum boonei T469]
 gi|197623114|gb|EDY35681.1| hypothetical protein ABOONEI_218 [Aciduliprofundum boonei T469]
 gi|289533812|gb|ADD08159.1| CMP/dCMP deaminase zinc-binding protein [Aciduliprofundum boonei
           T469]
          Length = 161

 Score = 69.6 bits (170), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 28/126 (22%), Positives = 43/126 (34%), Gaps = 26/126 (20%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNR--------------NRELKD 49
              FM  A   +  +       VGAV V + +I++   N                 EL  
Sbjct: 6   DEYFMRMAYLASTRSTCTRRK-VGAVIVKDKRILATGYNGPPKGLAHCDVTGCIREELNV 64

Query: 50  VTA---------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
            +          HAE  AI      +    + +  +YVT  PC +CA  +  A I+ + Y
Sbjct: 65  PSGERHELCRGLHAEQNAIIQAA--VHGVSIKDATIYVTNHPCVVCAKMLINAEIKEIVY 122

Query: 101 GASNPK 106
               P 
Sbjct: 123 AEGYPD 128


>gi|59714100|ref|YP_206875.1| deoxycytidylate deaminase [Vibrio fischeri ES114]
 gi|197337866|ref|YP_002158583.1| RibG [Vibrio fischeri MJ11]
 gi|59482348|gb|AAW87987.1| deoxycytidylate deaminase [Vibrio fischeri ES114]
 gi|197315118|gb|ACH64567.1| RibG [Vibrio fischeri MJ11]
          Length = 147

 Score = 69.6 bits (170), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 27/87 (31%), Positives = 34/87 (39%), Gaps = 18/87 (20%)

Query: 26  VGAVAVLNNKIISRAGN-------------RNRELKDVTAHAEILAIRMGCRILSQEILP 72
           VGAV   +N+I+S   N                     T HAE  AI    R      L 
Sbjct: 27  VGAVITKHNRIVSVGFNGYPHGVSDSADTDEREIKYLKTLHAEENAILFAKR-----DLE 81

Query: 73  EVDLYVTLEPCTMCAAAISLARIRRLY 99
             D++VT  PC  CAA I    I ++Y
Sbjct: 82  GCDIWVTHFPCPNCAAKIIQTGISKVY 108


>gi|5726586|gb|AAD48481.1|AF170104_9 unknown [Aliivibrio fischeri]
          Length = 124

 Score = 69.6 bits (170), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 27/87 (31%), Positives = 34/87 (39%), Gaps = 18/87 (20%)

Query: 26 VGAVAVLNNKIISRAGN-------------RNRELKDVTAHAEILAIRMGCRILSQEILP 72
          VGAV   +N+I+S   N                     T HAE  AI    R      L 
Sbjct: 4  VGAVITKHNRIVSVGFNGYPHGVSDSADTDEREIKYLKTLHAEENAILFAKR-----DLE 58

Query: 73 EVDLYVTLEPCTMCAAAISLARIRRLY 99
            D++VT  PC  CAA I    I ++Y
Sbjct: 59 GCDIWVTHFPCPNCAAKIIQTGISKVY 85


>gi|465877|sp|P33968|YLXG_VIBFI RecName: Full=Uncharacterized deaminase in luxG 3'region
 gi|396216|emb|CAA49769.1| unnamed protein product [Aliivibrio fischeri]
 gi|119116595|dbj|BAF40863.1| putative deoxycytidylate deaminase [Vibrio fischeri]
          Length = 147

 Score = 69.6 bits (170), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 27/87 (31%), Positives = 34/87 (39%), Gaps = 18/87 (20%)

Query: 26  VGAVAVLNNKIISRAGN-------------RNRELKDVTAHAEILAIRMGCRILSQEILP 72
           VGAV   +N+I+S   N                     T HAE  AI    R      L 
Sbjct: 27  VGAVITKHNRIVSVGFNGYPHGVSDSADTDEREIKYLKTLHAEENAILFAKR-----DLE 81

Query: 73  EVDLYVTLEPCTMCAAAISLARIRRLY 99
             D++VT  PC  CAA I    I ++Y
Sbjct: 82  GCDIWVTHFPCPNCAAKIIQTGISKVY 108


>gi|299743335|ref|XP_001835696.2| hypothetical protein CC1G_07120 [Coprinopsis cinerea okayama7#130]
 gi|298405607|gb|EAU86041.2| hypothetical protein CC1G_07120 [Coprinopsis cinerea okayama7#130]
          Length = 480

 Score = 69.6 bits (170), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 21/65 (32%), Positives = 34/65 (52%)

Query: 64  RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123
           +  S  +L    +++T EPC MC+ A+  +R+R ++Y    PK GG  + T   TL   +
Sbjct: 376 QNGSNYLLTNQTIFLTHEPCIMCSMALLHSRVREVFYLYPMPKTGGCGSLTCLPTLKGVN 435

Query: 124 HSPEI 128
           H   I
Sbjct: 436 HRFTI 440


>gi|215410398|ref|ZP_03419206.1| deaminase [Mycobacterium tuberculosis 94_M4241A]
          Length = 140

 Score = 69.6 bits (170), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 20/55 (36%), Positives = 25/55 (45%)

Query: 46  ELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
           +  D TAHAE LAIR  C  L  E L    L V   PC MC  ++       + +
Sbjct: 13  QTNDPTAHAESLAIRAACTKLGTEHLVGTTLNVLAHPCPMCYGSLYYCSPDEVVF 67


>gi|256847006|ref|ZP_05552452.1| ComE operon protein 2 [Lactobacillus coleohominis 101-4-CHN]
 gi|256715670|gb|EEU30645.1| ComE operon protein 2 [Lactobacillus coleohominis 101-4-CHN]
          Length = 162

 Score = 69.6 bits (170), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 35/154 (22%), Positives = 51/154 (33%), Gaps = 24/154 (15%)

Query: 1   MKK----GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKD------- 49
           MKK       FM  A   A     R  + VGA+ V + +II    N      D       
Sbjct: 1   MKKRIDWDQYFMVQAGLVASRGTCRR-LSVGAILVRDKRIIGSGYNGAVAGDDHCIDVGC 59

Query: 50  --------VTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
                    T HAE+ A+   C            LYVT  PC  C  ++  A I+++ Y 
Sbjct: 60  YMRDGHCVRTIHAEMNALLQ-CAKFGTPT-DGAVLYVTDFPCLQCTKSLLQAGIKQINYL 117

Query: 102 ASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQ 135
            +           +   +    H   +   I E+
Sbjct: 118 RNYHNDEYAMKLIRLKNVKL--HQIRLDSNILEE 149


>gi|159038151|ref|YP_001537404.1| CMP/dCMP deaminase zinc-binding [Salinispora arenicola CNS-205]
 gi|157916986|gb|ABV98413.1| CMP/dCMP deaminase zinc-binding [Salinispora arenicola CNS-205]
          Length = 162

 Score = 69.6 bits (170), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 31/135 (22%), Positives = 49/135 (36%), Gaps = 22/135 (16%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVG------AVAVLN-NKIISRAGNRNRELKDVTAHA 54
           +    ++  A+E ++        PVG      A+ V      ++   +R     D   HA
Sbjct: 6   RTDRQWLLRAIELSR-----GSSPVGTAYSVGAIIVAAAGDQLTEGYSR---DTDAHTHA 57

Query: 55  EILAIRMGCRILSQEILPEVDLYVTLEPCT-------MCAAAISLARIRRLYYGASNPKG 107
           E  A+    R+     L    LY ++EPCT        C   I  A IRR+ Y    P  
Sbjct: 58  EESAVAKVERLAPHPDLTGATLYSSMEPCTSRKSRPRTCTELILAAGIRRVVYALREPPL 117

Query: 108 GGIENGTQFYTLATC 122
               +GT+    +  
Sbjct: 118 LAECHGTEVLRSSGI 132


>gi|315037464|ref|YP_004031032.1| dCMP deaminase [Lactobacillus amylovorus GRL 1112]
 gi|312275597|gb|ADQ58237.1| dCMP deaminase [Lactobacillus amylovorus GRL 1112]
          Length = 159

 Score = 69.6 bits (170), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 30/111 (27%), Positives = 47/111 (42%), Gaps = 18/111 (16%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELK----DV---------- 50
             FM  AL  AQ +     + VG+V V +++II    N +   +    DV          
Sbjct: 9   QYFMMQALVIAQRSTCNRAL-VGSVLVKDHRIIGTGYNGSVSGQPHCDDVGHQMVDDHCV 67

Query: 51  -TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
            T H+E+ AI    +          ++YVT  PC  C  A+  A I+++ Y
Sbjct: 68  RTIHSEMNAIIQCAKFGVST--ENTEIYVTHFPCYNCCKALVQAGIKKINY 116


>gi|290959312|ref|YP_003490494.1| reductase [Streptomyces scabiei 87.22]
 gi|260648838|emb|CBG71952.1| putative reductase [Streptomyces scabiei 87.22]
          Length = 385

 Score = 69.6 bits (170), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 30/118 (25%), Positives = 43/118 (36%), Gaps = 23/118 (19%)

Query: 4   GNVFMSCALEEA------QNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEI 56
              ++  A E A      + A       VGAV V  +   ++R  +R  E  D   HAE 
Sbjct: 239 DRHWLDLACELAAACPPSRTAFS-----VGAVVVAEDGTELARGHSR--EGGDPVVHAEE 291

Query: 57  LAIRMGCRILSQEILPEVDLYVTLEPC-------TMCAAAISLARIRRLYYGASNPKG 107
            A+       +   L    +Y +LEPC         CA  +  A IRR+      P  
Sbjct: 292 AAL--AKIDPADPRLASATVYSSLEPCARRASRPAPCARLVLDAGIRRVVTAWREPDT 347


>gi|158428667|pdb|2HVV|A Chain A, Crystal Structure Of Dcmp Deaminase From Streptococcus
           Mutans
 gi|158428668|pdb|2HVV|B Chain B, Crystal Structure Of Dcmp Deaminase From Streptococcus
           Mutans
 gi|158428669|pdb|2HVW|A Chain A, Crystal Structure Of Dcmp Deaminase From Streptococcus
           Mutans
 gi|158428670|pdb|2HVW|B Chain B, Crystal Structure Of Dcmp Deaminase From Streptococcus
           Mutans
 gi|158428671|pdb|2HVW|C Chain C, Crystal Structure Of Dcmp Deaminase From Streptococcus
           Mutans
          Length = 184

 Score = 69.6 bits (170), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 25/90 (27%), Positives = 37/90 (41%), Gaps = 17/90 (18%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKD---------------VTAHAEILAIRMGCRILSQEI 70
           VGAV V NN+II+   N      D                T HAE+ A+    +      
Sbjct: 63  VGAVLVKNNRIIATGYNGGVADTDNCDDVGHEMEDGHCIRTVHAEMNALIQCAKEGISAN 122

Query: 71  LPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
               ++YVT  PC  C  A+  A ++++ Y
Sbjct: 123 --NTEIYVTHFPCINCTKALLQAGVKKITY 150


>gi|13542119|ref|NP_111807.1| deoxycytidylate deaminase [Thermoplasma volcanium GSS1]
 gi|14325550|dbj|BAB60453.1| dCMP deaminase [Thermoplasma volcanium GSS1]
          Length = 170

 Score = 69.6 bits (170), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 28/134 (20%), Positives = 45/134 (33%), Gaps = 42/134 (31%)

Query: 4   GNVFMSCALEEA-------QNAALRNEIPVGAVAVLNNKIISRAGNR------------- 43
              FM  A   A       +         VGAV V +  +++   N              
Sbjct: 10  DEYFMRMAYLAASRTNCIRRK--------VGAVIVKDKNVLATGYNGPPSGTAHCDVVGC 61

Query: 44  -NRELKDVTA---------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLA 93
              +LK  +          HAE  AI      +    + +  +YVT  PC +C+  I  A
Sbjct: 62  IREDLKIPSGERHELCRGLHAEQNAIIQAA--VHGVSIKDSTIYVTTHPCVVCSKMIMNA 119

Query: 94  RIRRLYY--GASNP 105
           +I+ + Y  G  + 
Sbjct: 120 QIKEIVYAEGYPDE 133


>gi|313212488|emb|CBY36459.1| unnamed protein product [Oikopleura dioica]
          Length = 123

 Score = 69.6 bits (170), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 25/89 (28%), Positives = 44/89 (49%), Gaps = 1/89 (1%)

Query: 48  KDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKG 107
           K+   HA +  +      + + IL  +++Y+  EPC MC+ A+S +RI+RL+Y       
Sbjct: 28  KNPLGHAALNLVAKAA-GMGEYILTGLEVYMYREPCLMCSMALSHSRIKRLFYLKKCGTD 86

Query: 108 GGIENGTQFYTLATCHHSPEIYPGISEQR 136
           G        +TL   +H  +++ G  E R
Sbjct: 87  GSCGTRESIHTLPALNHRFQVFYGGFEDR 115


>gi|190348437|gb|EDK40888.2| hypothetical protein PGUG_04986 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 338

 Score = 69.6 bits (170), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 28/125 (22%), Positives = 40/125 (32%), Gaps = 30/125 (24%)

Query: 4   GNVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGN-------RNRELKDV---- 50
            + FM  A + A  A   N  +  VG V V  N++I+   N          E        
Sbjct: 185 DSYFMRLA-DLA--ALRSNCMKRRVGCVVVRGNRVIATGYNGTPRNLPNCNEGGCPRCNM 241

Query: 51  ------------TAHAEILAIRMGCRILSQEILPEV--DLYVTLEPCTMCAAAISLARIR 96
                         HAE  A+    R       P+    LY    PC  C+  I  + I+
Sbjct: 242 GHGSGAELSTCLCLHAEENALLEAGRDRISRSHPDERGVLYCNTCPCLTCSIKIVQSGIK 301

Query: 97  RLYYG 101
            + Y 
Sbjct: 302 EVVYA 306


>gi|171683047|ref|XP_001906466.1| hypothetical protein [Podospora anserina S mat+]
 gi|170941483|emb|CAP67134.1| unnamed protein product [Podospora anserina S mat+]
          Length = 243

 Score = 69.6 bits (170), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 32/142 (22%), Positives = 48/142 (33%), Gaps = 26/142 (18%)

Query: 26  VGAVAV------LNNKIISRAGNRNRELKDVTAHAEILAIRM--------GCRILSQEIL 71
            G V V          +I    N+N    + T H E+ AI             +   E L
Sbjct: 74  FGTVIVNHTLDNPQGTLICTGANQNSLAGNPTLHGEMAAINNCSSIFVSSAYNMTPAESL 133

Query: 72  P---EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENG-TQFYTLATC----- 122
               ++ LY   E C MCAAA+  A  R   YG S  +   +  G     +         
Sbjct: 134 AAFKDLSLYTNAESCPMCAAAVRWAGFREYVYGVSIKELIELGWGQLDIGSEEVIGSGVG 193

Query: 123 --HHSPEIY-PGISEQRSRQII 141
                PE+   G+  + S+ + 
Sbjct: 194 MRDQDPEVVLGGVGSEESKVLF 215


>gi|254459248|ref|ZP_05072670.1| cytidine/deoxycytidylate deaminase family protein
           [Campylobacterales bacterium GD 1]
 gi|207084141|gb|EDZ61431.1| cytidine/deoxycytidylate deaminase family protein
           [Campylobacterales bacterium GD 1]
          Length = 152

 Score = 69.6 bits (170), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 15/68 (22%), Positives = 25/68 (36%), Gaps = 7/68 (10%)

Query: 2   KKGNVFMSCALE-------EAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHA 54
           K     +  A++       +A      +    GAV   + KI+    N   +  D + H 
Sbjct: 82  KTHRKHIRRAIKLGAHNPMQALKGHAPDGGFFGAVIYKDGKILGEGWNTVLKEGDPSRHG 141

Query: 55  EILAIRMG 62
           E+ AIR  
Sbjct: 142 EMNAIRQA 149


>gi|312195561|ref|YP_004015622.1| CMP/dCMP deaminase zinc-binding protein [Frankia sp. EuI1c]
 gi|311226897|gb|ADP79752.1| CMP/dCMP deaminase zinc-binding protein [Frankia sp. EuI1c]
          Length = 161

 Score = 69.6 bits (170), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 33/148 (22%), Positives = 51/148 (34%), Gaps = 27/148 (18%)

Query: 4   GNVFMSCALEEA------QNAALRNEIPVGAVAVLNNK--IISRAGNRNRELKDVTAHAE 55
              ++  A+E A      + A       VGAV V  +   +++   +R     D   HAE
Sbjct: 16  DGHWLEYAVELALRCPPSRTAFS-----VGAVIVGPDGATVLAEGWSR---AGDPRDHAE 67

Query: 56  ILAIRMGCRILSQEILPEVDLYVTLEPCT-------MCAAAISLARIRRLYYGASNPKGG 108
             A+R          L    LY +LEPC+        C      A I R+ +    P   
Sbjct: 68  EAALR--GFAPGDPRLAGATLYSSLEPCSARASRPRTCTELTLAAGIGRVVFAWREPALF 125

Query: 109 GIENGTQFYTLA--TCHHSPEIYPGISE 134
               G +    A  T    P++  G+  
Sbjct: 126 VDCQGAELLAAAGVTVVERPDLAAGVRA 153


>gi|148269654|ref|YP_001244114.1| CMP/dCMP deaminase, zinc-binding [Thermotoga petrophila RKU-1]
 gi|170288329|ref|YP_001738567.1| CMP/dCMP deaminase zinc-binding [Thermotoga sp. RQ2]
 gi|281411636|ref|YP_003345715.1| CMP/dCMP deaminase zinc-binding protein [Thermotoga naphthophila
           RKU-10]
 gi|147735198|gb|ABQ46538.1| CMP/dCMP deaminase, zinc-binding [Thermotoga petrophila RKU-1]
 gi|170175832|gb|ACB08884.1| CMP/dCMP deaminase zinc-binding [Thermotoga sp. RQ2]
 gi|281372739|gb|ADA66301.1| CMP/dCMP deaminase zinc-binding protein [Thermotoga naphthophila
           RKU-10]
          Length = 169

 Score = 69.6 bits (170), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 27/120 (22%), Positives = 48/120 (40%), Gaps = 26/120 (21%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNR-------NRELKDVTA---- 52
            + FM  A   ++ +       VGAV V +++I++   N+         E+  +      
Sbjct: 25  DSYFMRIARMVSERSTCV-HRKVGAVIVKDHRILATGYNQPPSKFPHCNEIGCIRDDLEI 83

Query: 53  ------------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
                       HAE  A+    +      +    +YVT +PC++CA  I  A I+R+ Y
Sbjct: 84  NSGEHQEICYALHAEQNALMQAAKFGIA--VNGATIYVTHKPCSICARLIVNAGIKRVVY 141


>gi|295395079|ref|ZP_06805288.1| riboflavin biosynthesis protein RibD [Brevibacterium mcbrellneri
           ATCC 49030]
 gi|294972027|gb|EFG47893.1| riboflavin biosynthesis protein RibD [Brevibacterium mcbrellneri
           ATCC 49030]
          Length = 336

 Score = 69.6 bits (170), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 27/109 (24%), Positives = 38/109 (34%), Gaps = 14/109 (12%)

Query: 9   SCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQ 68
             AL  A          VGA  + ++   +   ++       T HAE  AIR      + 
Sbjct: 9   RAALGAATRGVRGANPLVGAAVLWDDGTFTTGYHQ----GAGTPHAEPDAIRNASPRSTT 64

Query: 69  EILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIE 111
                  L VTLEPC+       C  AI  A I R+   + +P      
Sbjct: 65  ----GATLVVTLEPCSHTGRTGPCTQAIIDAGITRVVIASRDPNPQASG 109


>gi|217076231|ref|YP_002333947.1| deoxycytidylate deaminase [Thermosipho africanus TCF52B]
 gi|217036084|gb|ACJ74606.1| deoxycytidylate deaminase [Thermosipho africanus TCF52B]
          Length = 170

 Score = 69.6 bits (170), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 30/130 (23%), Positives = 51/130 (39%), Gaps = 31/130 (23%)

Query: 26  VGAVAVLNNKIISRAGNRN-------------RELKDVTA----------HAEILAIRMG 62
           VGAV V + +I++   N+              R+  ++ +          HAE  A+   
Sbjct: 44  VGAVIVKDKRILATGYNQPPSGFPHCDDIGCIRDDLNIKSGENQEVCYALHAEQNALMQA 103

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
            +           +YVT +PC++CA  I  A I+++ Y    P      + T F    T 
Sbjct: 104 AKFGISTD--GATIYVTHKPCSVCARLIINAGIKKVVYLNDYPD-----SLTDFL-FKTS 155

Query: 123 HHSPEIYPGI 132
             S E + G+
Sbjct: 156 KISVEKHGGV 165


>gi|239623208|ref|ZP_04666239.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
 gi|239522174|gb|EEQ62040.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
          Length = 164

 Score = 69.6 bits (170), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 35/126 (27%), Positives = 49/126 (38%), Gaps = 33/126 (26%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVL-NNKIISRAGN-------------- 42
           +     FM  AL   + +      P   VGA  V  +NKI+S   N              
Sbjct: 9   ITWDEYFMGVALLSGRRSKD----PSTQVGACIVSQDNKILSMGYNGFPKGCSDDEFPWG 64

Query: 43  RNRELKDV-------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARI 95
           + ++ +D        + H+E+ AI           L    LYVTL PC  CA AI  A I
Sbjct: 65  KEKQEEDPYNSKYFYSTHSELNAILN----YRGGSLEGSKLYVTLFPCNECAKAIIQAGI 120

Query: 96  RRLYYG 101
           + + YG
Sbjct: 121 KTIIYG 126


>gi|325955922|ref|YP_004286532.1| dCMP deaminase [Lactobacillus acidophilus 30SC]
 gi|325332487|gb|ADZ06395.1| dCMP deaminase [Lactobacillus acidophilus 30SC]
 gi|327182757|gb|AEA31204.1| dCMP deaminase [Lactobacillus amylovorus GRL 1118]
          Length = 159

 Score = 69.6 bits (170), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 30/111 (27%), Positives = 47/111 (42%), Gaps = 18/111 (16%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELK----DV---------- 50
             FM  AL  AQ +     + VG+V V +++II    N +   +    DV          
Sbjct: 9   QYFMMQALVIAQRSTCNRAL-VGSVLVKDHRIIGTGYNGSVSGQPHCDDVGHQMVDGHCV 67

Query: 51  -TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
            T H+E+ AI    +          ++YVT  PC  C  A+  A I+++ Y
Sbjct: 68  RTIHSEMNAIIQCAKFGVST--ENTEIYVTHFPCYNCCKALVQAGIKKINY 116


>gi|325954402|ref|YP_004238062.1| CMP/dCMP deaminase zinc-binding protein [Weeksella virosa DSM
           16922]
 gi|323437020|gb|ADX67484.1| CMP/dCMP deaminase zinc-binding protein [Weeksella virosa DSM
           16922]
          Length = 143

 Score = 69.6 bits (170), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 34/147 (23%), Positives = 52/147 (35%), Gaps = 24/147 (16%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGN-------RNRELKDV--- 50
           +K    ++  A E A+ +    +  VGA+ V +  IIS   N          E ++    
Sbjct: 7   LKYDKAYLRIAREWAKLSYCERKK-VGAIIVKDRAIISDGFNGSPSGFDNRCEDENGETK 65

Query: 51  --TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGG 108
               HAE  AI                LY+TL PC  C+  I  + I R+ Y   + K  
Sbjct: 66  WYILHAEANAILKVAASTQS--CKGATLYLTLSPCKDCSKLIHQSGINRVVY-MQDYK-- 120

Query: 109 GIENGTQFYTLATCHHSPEIYPGISEQ 135
                     L   H +  +   I E+
Sbjct: 121 ------DVEGLDFLHKAGVVIEQIPEE 141


>gi|315222930|ref|ZP_07864809.1| putative ComE operon protein 2 [Streptococcus anginosus F0211]
 gi|315187880|gb|EFU21616.1| putative ComE operon protein 2 [Streptococcus anginosus F0211]
          Length = 164

 Score = 69.6 bits (170), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 30/112 (26%), Positives = 42/112 (37%), Gaps = 19/112 (16%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELK-----------DV-- 50
              F + AL  A  +  +    VGAV V +NK+IS   N +               D   
Sbjct: 18  DEYFAAQALLIANRSTCKR-ASVGAVIVKDNKVISTGYNGSVSGTEHCIDHECLIVDGHC 76

Query: 51  --TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
             T HAE+ AI  G      +      +YVT  PC  C   +     +R+ Y
Sbjct: 77  VRTLHAEVNAILQGAERGIPK---GFTVYVTHFPCLNCTKQLLQVGCKRVVY 125


>gi|269960107|ref|ZP_06174484.1| deoxycytidylate deaminase, putative [Vibrio harveyi 1DA3]
 gi|269835406|gb|EEZ89488.1| deoxycytidylate deaminase, putative [Vibrio harveyi 1DA3]
          Length = 152

 Score = 69.6 bits (170), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 28/86 (32%), Positives = 35/86 (40%), Gaps = 18/86 (20%)

Query: 26  VGAVAVLNNKIISRAGN-------------RNRELKDVTAHAEILAIRMGCRILSQEILP 72
           VGAV   NN+I+S   N                     T HAE  AI     + S+  L 
Sbjct: 27  VGAVITKNNRIVSVGFNGYPHGVSDSVDTDERELKYLKTLHAEENAI-----LFSKRDLD 81

Query: 73  EVDLYVTLEPCTMCAAAISLARIRRL 98
             D++VT  PC  CAA I    I R+
Sbjct: 82  GCDIWVTHFPCPNCAAKIIQTGIARV 107


>gi|156976611|ref|YP_001447517.1| deoxycytidylate deaminase [Vibrio harveyi ATCC BAA-1116]
 gi|156528205|gb|ABU73290.1| hypothetical protein VIBHAR_05385 [Vibrio harveyi ATCC BAA-1116]
          Length = 168

 Score = 69.6 bits (170), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 28/86 (32%), Positives = 35/86 (40%), Gaps = 18/86 (20%)

Query: 26  VGAVAVLNNKIISRAGN-------------RNRELKDVTAHAEILAIRMGCRILSQEILP 72
           VGAV   NN+I+S   N                     T HAE  AI     + S+  L 
Sbjct: 43  VGAVITKNNRIVSVGFNGYPHGVSDSVDTDERELKYLKTLHAEENAI-----LFSKRDLD 97

Query: 73  EVDLYVTLEPCTMCAAAISLARIRRL 98
             D++VT  PC  CAA I    I R+
Sbjct: 98  GCDIWVTHFPCPNCAAKIIQTGIARV 123


>gi|153832876|ref|ZP_01985543.1| deoxycytidylate deaminase [Vibrio harveyi HY01]
 gi|148870799|gb|EDL69698.1| deoxycytidylate deaminase [Vibrio harveyi HY01]
          Length = 152

 Score = 69.6 bits (170), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 28/86 (32%), Positives = 35/86 (40%), Gaps = 18/86 (20%)

Query: 26  VGAVAVLNNKIISRAGN-------------RNRELKDVTAHAEILAIRMGCRILSQEILP 72
           VGAV   NN+I+S   N                     T HAE  AI     + S+  L 
Sbjct: 27  VGAVITKNNRIVSVGFNGYPHGVSDSVDTDERELKYLKTLHAEENAI-----LFSKRDLD 81

Query: 73  EVDLYVTLEPCTMCAAAISLARIRRL 98
             D++VT  PC  CAA I    I R+
Sbjct: 82  GCDIWVTHFPCPNCAAKIIQTGIARV 107


>gi|50914883|ref|YP_060855.1| ComE operon protein 2 [Streptococcus pyogenes MGAS10394]
 gi|94989182|ref|YP_597283.1| comE operon protein 2 [Streptococcus pyogenes MGAS9429]
 gi|94993070|ref|YP_601169.1| ComE operon protein 2 [Streptococcus pyogenes MGAS2096]
 gi|94995003|ref|YP_603101.1| ComE operon protein 2 [Streptococcus pyogenes MGAS10750]
 gi|50903957|gb|AAT87672.1| ComE operon protein 2 [Streptococcus pyogenes MGAS10394]
 gi|94542690|gb|ABF32739.1| comE operon protein 2 [Streptococcus pyogenes MGAS9429]
 gi|94546578|gb|ABF36625.1| ComE operon protein 2 [Streptococcus pyogenes MGAS2096]
 gi|94548511|gb|ABF38557.1| ComE operon protein 2 [Streptococcus pyogenes MGAS10750]
          Length = 168

 Score = 69.6 bits (170), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 25/90 (27%), Positives = 36/90 (40%), Gaps = 17/90 (18%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKD---------------VTAHAEILAIRMGCRILSQEI 70
           VGAV V +N+II+   N      D                T HAE+ A+    +      
Sbjct: 44  VGAVLVKDNRIIATGYNGGVSATDNCNEAGHYMEDGHCIRTVHAEMNALIQCAKEGISTD 103

Query: 71  LPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
               ++YVT  PC  C  A+  A I ++ Y
Sbjct: 104 --GTEIYVTHFPCINCTKALLQAGITKITY 131


>gi|146414121|ref|XP_001483031.1| hypothetical protein PGUG_04986 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 338

 Score = 69.6 bits (170), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 28/125 (22%), Positives = 40/125 (32%), Gaps = 30/125 (24%)

Query: 4   GNVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGN-------RNRELKDV---- 50
            + FM  A + A  A   N  +  VG V V  N++I+   N          E        
Sbjct: 185 DSYFMRLA-DLA--ALRSNCMKRRVGCVVVRGNRVIATGYNGTPRNLPNCNEGGCPRCNM 241

Query: 51  ------------TAHAEILAIRMGCRILSQEILPEV--DLYVTLEPCTMCAAAISLARIR 96
                         HAE  A+    R       P+    LY    PC  C+  I  + I+
Sbjct: 242 GHGSGAELSTCLCLHAEENALLEAGRDRISRSHPDERGVLYCNTCPCLTCSIKIVQSGIK 301

Query: 97  RLYYG 101
            + Y 
Sbjct: 302 EVVYA 306


>gi|115938354|ref|XP_001201090.1| PREDICTED: hypothetical protein, partial [Strongylocentrotus
           purpuratus]
          Length = 146

 Score = 69.6 bits (170), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 26/128 (20%), Positives = 51/128 (39%), Gaps = 27/128 (21%)

Query: 26  VGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS---------------- 67
           +GA+ V   ++  +    +     ++   HA +  I +                      
Sbjct: 3   IGALIVDPKSDTTLGMTSSVPGIGENSLQHAVMKCIDLVAHSQGGGAWSICPESCYESVN 62

Query: 68  --------QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
                     +    DLY+T EPC MCA A+  +RIRR++Y  S+P  G + +  + +  
Sbjct: 63  GECSTDETPYLCTGFDLYITQEPCVMCAMALVHSRIRRVFYIDSHPD-GALGSRYKLHAE 121

Query: 120 ATCHHSPE 127
           ++ +H  +
Sbjct: 122 SSLNHRYQ 129


>gi|269838886|ref|YP_001949988.2| deoxycytidylate deaminase domain like protein [Ralstonia phage
           RSL1]
 gi|239793682|dbj|BAG41558.2| deoxycytidylate deaminase domain like protein [Ralstonia phage
           RSL1]
          Length = 145

 Score = 69.6 bits (170), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 32/125 (25%), Positives = 42/125 (33%), Gaps = 28/125 (22%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGN-----------RNRELKD 49
           M   N +MS A   A  +       VG V    ++I+S A N            +   KD
Sbjct: 1   MDLDNFYMSIAHHAADQSHAIRRK-VGCVVAKGDRILSYAWNGMPAGFHNDCEHSVLTKD 59

Query: 50  V--------------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARI 95
                            HAE+ AI                LY+TL PC  CA  I  + I
Sbjct: 60  PETGILQFQLLTKPGVTHAEVNAIGKLAAAGIS--CAGATLYLTLSPCVPCANLIQRSGI 117

Query: 96  RRLYY 100
            R+ Y
Sbjct: 118 ERVVY 122


>gi|24380210|ref|NP_722165.1| putative deoxycytidylate deaminase [Streptococcus mutans UA159]
 gi|24378216|gb|AAN59471.1|AE015011_10 putative deoxycytidylate deaminase [Streptococcus mutans UA159]
          Length = 150

 Score = 69.6 bits (170), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 25/90 (27%), Positives = 37/90 (41%), Gaps = 17/90 (18%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKD---------------VTAHAEILAIRMGCRILSQEI 70
           VGAV V NN+II+   N      D                T HAE+ A+    +      
Sbjct: 29  VGAVLVKNNRIIATGYNGGVADTDNCDDVGHEMEDGHCIRTVHAEMNALIQCAKEGISAN 88

Query: 71  LPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
               ++YVT  PC  C  A+  A ++++ Y
Sbjct: 89  --NTEIYVTHFPCINCTKALLQAGVKKITY 116


>gi|332025338|gb|EGI65506.1| Deoxycytidylate deaminase [Acromyrmex echinatior]
          Length = 182

 Score = 69.6 bits (170), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 28/128 (21%), Positives = 43/128 (33%), Gaps = 41/128 (32%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNK-IISRAGNRNRELKDVTA---- 52
           +     FM+ A   A+ +      P   VGA  V N+K I+    N        T     
Sbjct: 9   IDWDEYFMAIAFLSAKRSKD----PCTQVGACIVNNDKRIVGIGYN-----GMPTGCSDD 59

Query: 53  --------------------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISL 92
                               HAE+ A+       +   + +  +YV L PC  CA  I  
Sbjct: 60  EFPWKRGLHTSLESKYLYVCHAEVNAVLN----KNSSNVKDCTIYVALFPCNQCAKVIIQ 115

Query: 93  ARIRRLYY 100
           + I+ + Y
Sbjct: 116 SGIKTVIY 123


>gi|237785569|ref|YP_002906274.1| diaminohydroxyphosphoribosylaminopyrimidinedeaminase
           [Corynebacterium kroppenstedtii DSM 44385]
 gi|237758481|gb|ACR17731.1| diaminohydroxyphosphoribosylaminopyrimidinedeaminase
           [Corynebacterium kroppenstedtii DSM 44385]
          Length = 357

 Score = 69.6 bits (170), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 28/138 (20%), Positives = 43/138 (31%), Gaps = 23/138 (16%)

Query: 8   MSCALEEAQNAALRN--EIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           M  A E    A        PVGAV +  + +I+ +   +         HAE++A+R    
Sbjct: 24  MDRAAELGWEAKGTTSPNPPVGAVIIDADGRIVGQGHTQPAGG----PHAEVMAVRDAGD 79

Query: 65  ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
             +          VTLEPC        C   +  A I  + Y   +P       G +   
Sbjct: 80  ATAGAT-----AIVTLEPCAHTGRTGPCTDVLLSAGISTVVYAVPDPNPIAHG-GHEVLA 133

Query: 119 LATCHHSPEIYPGISEQR 136
                    +  G     
Sbjct: 134 EKGL----TVIGGFHADE 147


>gi|291237544|ref|XP_002738694.1| PREDICTED: predicted protein-like [Saccoglossus kowalevskii]
          Length = 203

 Score = 69.6 bits (170), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 36/152 (23%), Positives = 55/152 (36%), Gaps = 34/152 (22%)

Query: 5   NVFMSCALEEAQNAALRNEIP---VGAVAVLNNK-IISRAGNR------------NRELK 48
           + FM+ A   AQ +      P   VGA  V   K I+    N              R+  
Sbjct: 50  DYFMAVAFLSAQRSKD----PSSQVGACIVNEEKKIVGIGYNGMPIGCSDDVLPWRRKAD 105

Query: 49  DVTA-------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
           D          HAE+ AI       +   +    +YV L PC  CA  +  ++I+ + Y 
Sbjct: 106 DELDTKYPYVCHAELNAILN----KNSSDVKGCTMYVALFPCNECAKLVIQSKIKEVVY- 160

Query: 102 ASNP--KGGGIENGTQFYTLATCHHSPEIYPG 131
            SN      G+    +   LA   +  E++ G
Sbjct: 161 VSNKYHDTAGVTASRKMLDLAGVKYRYEVHSG 192


>gi|312113516|ref|YP_004011112.1| riboflavin biosynthesis protein RibD [Rhodomicrobium vannielii ATCC
           17100]
 gi|311218645|gb|ADP70013.1| riboflavin biosynthesis protein RibD [Rhodomicrobium vannielii ATCC
           17100]
          Length = 398

 Score = 69.6 bits (170), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 35/133 (26%), Positives = 46/133 (34%), Gaps = 23/133 (17%)

Query: 9   SCALEEAQ--NAALRNEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
             AL  AQ    A      VGAV       +II+ A       +    HAE+LA+R    
Sbjct: 35  RRALFVAQTNIGATSPNPSVGAVVADARTGEIIASAA----TARGGRPHAEVLALREAG- 89

Query: 65  ILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
               +      +  TLEPC        CA +I  A I  L YG+ +P       G  +  
Sbjct: 90  ----DRAKGALIITTLEPCSHFGATPPCAHSIVNAGISHLIYGSLDPDTRVGGRGLTYVA 145

Query: 119 LATCHHSPEIYPG 131
                H      G
Sbjct: 146 Q----HGVRATRG 154


>gi|257790791|ref|YP_003181397.1| CMP/dCMP deaminase zinc-binding [Eggerthella lenta DSM 2243]
 gi|317488497|ref|ZP_07947048.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Eggerthella sp. 1_3_56FAA]
 gi|325831992|ref|ZP_08165089.1| ComE operon protein 2 [Eggerthella sp. HGA1]
 gi|257474688|gb|ACV55008.1| CMP/dCMP deaminase zinc-binding [Eggerthella lenta DSM 2243]
 gi|316912429|gb|EFV33987.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Eggerthella sp. 1_3_56FAA]
 gi|325486313|gb|EGC88765.1| ComE operon protein 2 [Eggerthella sp. HGA1]
          Length = 152

 Score = 69.6 bits (170), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 29/126 (23%), Positives = 44/126 (34%), Gaps = 38/126 (30%)

Query: 4   GNVFMSCALEEA------QNAALRNEIPVGAVAVLNNKIISRAGN--------------R 43
              FM+ A E A      + A       VGAV V + +I++   N               
Sbjct: 11  DEYFMTLANEVATRTTCMRRA-------VGAVIVKDRRILATGYNGVPTGMRHCAETGCL 63

Query: 44  NRELKDVTA---------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLAR 94
            ++L   +          HAE  AI    R      +    +YV  +PC +CA  +  A 
Sbjct: 64  RQQLGVPSGQRHEICRGLHAEQNAIIQAARYGIN--ITGASIYVNTQPCIVCAKMLINAG 121

Query: 95  IRRLYY 100
           I  + Y
Sbjct: 122 IDEIVY 127


>gi|325690868|gb|EGD32869.1| cytidine and deoxycytidylate deaminase [Streptococcus sanguinis
           SK115]
          Length = 155

 Score = 69.6 bits (170), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 31/117 (26%), Positives = 41/117 (35%), Gaps = 29/117 (24%)

Query: 4   GNVFMSCALEEA-----QNAALRNEIPVGAVAVLNNKIISRAGNRNRE------LKDV-- 50
              F + AL  A     + A       VGAV V +NK+IS   N +          D   
Sbjct: 9   DQYFAAQALLIANRSTCKRAK------VGAVLVKDNKVISTGYNGSVSGTEHCIDHDCLV 62

Query: 51  -------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
                  T HAE+ AI  G      +       YVT  PC  C   +     +R+ Y
Sbjct: 63  IDGHCVRTLHAEVNAILQGAERGVPK---GFTAYVTHFPCLNCTKQLLQVGCKRVVY 116


>gi|332882408|ref|ZP_08450036.1| ComE operon protein 2 family protein [Capnocytophaga sp. oral taxon
           329 str. F0087]
 gi|332679792|gb|EGJ52761.1| ComE operon protein 2 family protein [Capnocytophaga sp. oral taxon
           329 str. F0087]
          Length = 149

 Score = 69.6 bits (170), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 31/115 (26%), Positives = 46/115 (40%), Gaps = 18/115 (15%)

Query: 2   KKGNV---FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRN--------RELKDV 50
           KK  +   ++  A   A+N+       VGA+ V +  IIS   N           +   +
Sbjct: 7   KKHELDLRYLRMARIWAENSYCERRK-VGALIVKDKMIISDGYNGTPAGFENVCEDENHL 65

Query: 51  T----AHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
           T     HAE  AI    R  +        LYVT  PC  C+  I  + I+R++Y 
Sbjct: 66  TKPYVLHAEANAITKIARSGNNS--EGATLYVTDAPCIECSKLIIQSGIKRVFYA 118


>gi|78222831|ref|YP_384578.1| CMP/dCMP deaminase, zinc-binding protein [Geobacter metallireducens
           GS-15]
 gi|78194086|gb|ABB31853.1| CMP/dCMP deaminase, zinc-binding protein [Geobacter metallireducens
           GS-15]
          Length = 154

 Score = 69.6 bits (170), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 29/127 (22%), Positives = 43/127 (33%), Gaps = 28/127 (22%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGN--------------RNRELKD 49
              FM      A+ +       VGAV V +  I++   N                 +L  
Sbjct: 7   DEYFMEITHLVAKRSTCLR-RQVGAVIVKDKNILATGYNGAPSGVAHCLEVGCLRAKLGI 65

Query: 50  VTA---------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
            +          HAE  AI    +      +    LY T  PC +C+  +  A IRR+ Y
Sbjct: 66  PSGERHELCRGLHAEQNAIIQAAKHGIN--IDGGTLYCTTMPCIICSKMLINAGIRRVVY 123

Query: 101 --GASNP 105
             G S+ 
Sbjct: 124 EEGYSDE 130


>gi|160947203|ref|ZP_02094370.1| hypothetical protein PEPMIC_01136 [Parvimonas micra ATCC 33270]
 gi|158446337|gb|EDP23332.1| hypothetical protein PEPMIC_01136 [Parvimonas micra ATCC 33270]
          Length = 141

 Score = 69.6 bits (170), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 33/118 (27%), Positives = 45/118 (38%), Gaps = 21/118 (17%)

Query: 1   MKK--GNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNR-----------E 46
           M+K     FM  A   A          VG V V  +N+IIS   N +             
Sbjct: 1   MRKPWEEYFMDLAKMVATRGTCDRAY-VGCVLVNKDNRIISTGYNGSISGNPQCDEIGHT 59

Query: 47  LKD----VTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
           ++D     T HAE  A+    R   +  +     YVT  PC  C  A+  A I ++YY
Sbjct: 60  MRDGHCIATIHAEQNALLYCAREGIK--VKGCTCYVTHFPCLNCTKALIQAGISKIYY 115


>gi|308189593|ref|YP_003922524.1| dCMP deaminase [Mycoplasma fermentans JER]
 gi|319776745|ref|YP_004136396.1| deoxycytidylate deaminase protein [Mycoplasma fermentans M64]
 gi|238810149|dbj|BAH69939.1| hypothetical protein [Mycoplasma fermentans PG18]
 gi|307624335|gb|ADN68640.1| dCMP deaminase [Mycoplasma fermentans JER]
 gi|318037820|gb|ADV34019.1| Deoxycytidylate deaminase protein [Mycoplasma fermentans M64]
          Length = 163

 Score = 69.6 bits (170), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 31/125 (24%), Positives = 46/125 (36%), Gaps = 33/125 (26%)

Query: 4   GNVFMSCALEEAQNAALRNEIP---VGAVAVLNNK-IISRAGNRN-----------RELK 48
              FM+ A   A  +      P   VGA  V  NK II+   N             RE +
Sbjct: 9   DGYFMALAKVSALRSKD----PSTKVGACVVNENKRIIALGYNGMPKGIDDEFPWDREGE 64

Query: 49  DV-------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
                      HAE+ AI     + +   L    ++ +L PC+ CA  I+ + I  + Y 
Sbjct: 65  SPKETKYAYVVHAEMNAI-----LNTNNNLQGCTIFTSLYPCSSCAKTIAQSGISEVVY- 118

Query: 102 ASNPK 106
             + K
Sbjct: 119 -EDDK 122


>gi|218752491|ref|ZP_03531287.1| deaminase [Mycobacterium tuberculosis GM 1503]
 gi|254549800|ref|ZP_05140247.1| deaminase [Mycobacterium tuberculosis '98-R604 INH-RIF-EM']
          Length = 210

 Score = 69.6 bits (170), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 20/55 (36%), Positives = 25/55 (45%)

Query: 46  ELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
           +  D TAHAE LAIR  C  L  E L    L V   PC MC  ++       + +
Sbjct: 83  QTNDPTAHAESLAIRAACTKLGTEHLVGTTLNVLAHPCPMCYGSLYYCSPDEVVF 137


>gi|303228977|ref|ZP_07315787.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Veillonella atypica ACS-134-V-Col7a]
 gi|302516391|gb|EFL58323.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Veillonella atypica ACS-134-V-Col7a]
          Length = 159

 Score = 69.6 bits (170), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 35/121 (28%), Positives = 46/121 (38%), Gaps = 29/121 (23%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVL-NNKIISRAGN---RNRELKDVTA- 52
           +     FM  A+  AQ +      P   VGA  V  +NKI+S   N    N    D T  
Sbjct: 8   ISWDEYFMGVAILAAQRSKD----PNTQVGACIVSNDNKILSIGYNGMPLNCSDDDFTWE 63

Query: 53  -------------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLY 99
                        H+E+ AI           L    +YVTL PC  CA AI  + I+ + 
Sbjct: 64  RDTADDNKYFYTVHSELNAILN----YRGGSLEGSKIYVTLFPCNECAKAIIQSGIKAVL 119

Query: 100 Y 100
           Y
Sbjct: 120 Y 120


>gi|313844171|ref|YP_004061834.1| hypothetical protein OlV1_202 [Ostreococcus lucimarinus virus OlV1]
 gi|312599556|gb|ADQ91578.1| hypothetical protein OlV1_202 [Ostreococcus lucimarinus virus OlV1]
          Length = 136

 Score = 69.2 bits (169), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 27/111 (24%), Positives = 47/111 (42%), Gaps = 14/111 (12%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNR-----------NRELKD 49
           +     FM  A E A   +  + + VG V V NN++IS   N                + 
Sbjct: 5   ISWNEYFMKTA-ELASVRSPCDRLNVGCVLVKNNRLISMGYNGFLGGSNHTSIVRDGHEQ 63

Query: 50  VTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
            T HAEI A+    +      +   + Y+T  PC  C  A++ + +++++Y
Sbjct: 64  ATIHAEINAVTDAAKRGVS--IDGTEAYITHYPCLNCYKALASSGVKKIHY 112


>gi|215444965|ref|ZP_03431717.1| deaminase [Mycobacterium tuberculosis T85]
          Length = 215

 Score = 69.2 bits (169), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 20/55 (36%), Positives = 25/55 (45%)

Query: 46  ELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
           +  D TAHAE LAIR  C  L  E L    L V   PC MC  ++       + +
Sbjct: 88  QTNDPTAHAESLAIRAACTKLGTEHLVGTTLNVLAHPCPMCYGSLYYCSPDEVVF 142


>gi|52081108|ref|YP_079899.1| hypothetical protein BL02086 [Bacillus licheniformis ATCC 14580]
 gi|52786486|ref|YP_092315.1| hypothetical protein BLi02751 [Bacillus licheniformis ATCC 14580]
 gi|319644935|ref|ZP_07999168.1| late competence protein ComEB [Bacillus sp. BT1B_CT2]
 gi|18266365|gb|AAL67525.1|AF459916_2 late competence protein ComEB [Bacillus licheniformis]
 gi|52004319|gb|AAU24261.1| ComEB [Bacillus licheniformis ATCC 14580]
 gi|52348988|gb|AAU41622.1| ComEB [Bacillus licheniformis ATCC 14580]
 gi|317392744|gb|EFV73538.1| late competence protein ComEB [Bacillus sp. BT1B_CT2]
          Length = 189

 Score = 69.2 bits (169), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 27/116 (23%), Positives = 43/116 (37%), Gaps = 18/116 (15%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRE-------------- 46
           +     FM+ +   A  +     + VGA  V + +II+   N +                
Sbjct: 4   ISWDQYFMAQSHLLALRSTCTR-LAVGATIVRDKRIIAGGYNGSIAGGVHCADEGCYMVD 62

Query: 47  -LKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
                T HAE+ AI    +          ++YVT  PC  C  +I  A I+ +YY 
Sbjct: 63  GHCIRTIHAEMNAILQCAKFGVPT--EGAEIYVTHFPCIQCCKSIIQAGIKTIYYA 116


>gi|328463918|gb|EGF35436.1| hypothetical protein AAULH_01270 [Lactobacillus helveticus MTCC
           5463]
          Length = 358

 Score = 69.2 bits (169), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 28/108 (25%), Positives = 45/108 (41%), Gaps = 18/108 (16%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELK-----------DV--- 50
             FM  AL  AQ +     + VG+V V +N+II    N +   +           D    
Sbjct: 9   QYFMMQALVIAQRSTCNRAL-VGSVLVKDNRIIGTGYNGSVSGQPHCDEVGHQMVDGHCV 67

Query: 51  -TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRR 97
            T H+E+ AI    +        + ++YVT  PC  C  ++  A +R+
Sbjct: 68  RTIHSEMNAIIQCAKFGVSTD--DTEIYVTHFPCYNCCKSLFQAGVRK 113


>gi|28378749|ref|NP_785641.1| dCMP deaminase [Lactobacillus plantarum WCFS1]
 gi|254556952|ref|YP_003063369.1| dCMP deaminase [Lactobacillus plantarum JDM1]
 gi|300768267|ref|ZP_07078172.1| competence protein ComEB [Lactobacillus plantarum subsp. plantarum
           ATCC 14917]
 gi|308180941|ref|YP_003925069.1| dCMP deaminase [Lactobacillus plantarum subsp. plantarum ST-III]
 gi|28271586|emb|CAD64491.1| dCMP deaminase [Lactobacillus plantarum WCFS1]
 gi|254045879|gb|ACT62672.1| dCMP deaminase [Lactobacillus plantarum JDM1]
 gi|300494331|gb|EFK29494.1| competence protein ComEB [Lactobacillus plantarum subsp. plantarum
           ATCC 14917]
 gi|308046432|gb|ADN98975.1| dCMP deaminase [Lactobacillus plantarum subsp. plantarum ST-III]
          Length = 162

 Score = 69.2 bits (169), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 28/113 (24%), Positives = 45/113 (39%), Gaps = 20/113 (17%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDV------------- 50
              FM  A+  A  +     + VGA  V + +II+   N +    DV             
Sbjct: 10  DQYFMMQAVLLASRSTCER-LSVGATIVRDKRIIAGGYNGSVS-GDVHCIDEGCYLVDGH 67

Query: 51  ---TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
              T HAE+ AI    +  +       ++YVT  PC  C   +  A I++++Y
Sbjct: 68  CVRTIHAEMNAILQCAKFGAATD--GAEIYVTDFPCLQCTKMLLQAGIQKIHY 118


>gi|78045157|ref|YP_361349.1| putative comE operon protein 2 [Carboxydothermus hydrogenoformans
           Z-2901]
 gi|77997272|gb|ABB16171.1| putative comE operon protein 2 [Carboxydothermus hydrogenoformans
           Z-2901]
          Length = 170

 Score = 69.2 bits (169), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 21/98 (21%), Positives = 36/98 (36%), Gaps = 25/98 (25%)

Query: 26  VGAVAVLNNKIISRAGN--------------RNRELKDVTA---------HAEILAIRMG 62
           VGAV V +N++++   N                 +    +          HAE  AI   
Sbjct: 49  VGAVLVKDNRVLATGYNGAPKGVPHCEEVGCLREQEHVPSGQRHELCRGLHAEQNAIIQA 108

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
                        +Y+T +PC++CA  +  A + R+ Y
Sbjct: 109 AVYGVST--SGSTIYITHQPCSLCAKMLINAGVERVVY 144


>gi|323464316|gb|ADX76469.1| ComE operon protein 2, putative [Staphylococcus pseudintermedius
           ED99]
          Length = 153

 Score = 69.2 bits (169), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 27/116 (23%), Positives = 43/116 (37%), Gaps = 18/116 (15%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRE-------------- 46
           ++    FM+ +   A  +     + VGA    +N+II+   N +                
Sbjct: 4   IQWHEYFMAQSHLLALRSTCTR-LSVGATITKDNRIIAGGYNGSVSGEVHCIDEGCLMED 62

Query: 47  -LKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
                T HAE+ AI    +           +YVT  PC  C  +I  A I+ +YY 
Sbjct: 63  GHCIRTIHAEMNAILQCSKQGVST--ENATIYVTHFPCLNCTKSIIQAGIKTIYYA 116


>gi|254565397|ref|XP_002489809.1| Deoxycytidine monophosphate (dCMP) deaminase required for dCTP and
           dTTP synthesis [Pichia pastoris GS115]
 gi|238029605|emb|CAY67528.1| Deoxycytidine monophosphate (dCMP) deaminase required for dCTP and
           dTTP synthesis [Pichia pastoris GS115]
 gi|328350225|emb|CCA36625.1| dCMP deaminase [Pichia pastoris CBS 7435]
          Length = 308

 Score = 69.2 bits (169), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 28/122 (22%), Positives = 39/122 (31%), Gaps = 31/122 (25%)

Query: 4   GNVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRN----------------- 44
              FM  A + A  A   N  +  VG V V +N+IIS   N                   
Sbjct: 161 DAYFMRLA-DLA--ALRSNCMKRRVGCVVVRDNRIISTGYNGTPRNMPNCNQGGCARCNS 217

Query: 45  -RELKDVTA-----HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98
                +  +     HAE  A+    R           LY    PC  C+  I  + I+ +
Sbjct: 218 GNSSGNGLSTCLCLHAEENALLEAGRDRIS---TNSILYCNTCPCLTCSIKIIQSGIQEV 274

Query: 99  YY 100
            Y
Sbjct: 275 VY 276


>gi|319892646|ref|YP_004149521.1| dCMP deaminase; Late competence protein ComEB [Staphylococcus
           pseudintermedius HKU10-03]
 gi|317162342|gb|ADV05885.1| dCMP deaminase; Late competence protein ComEB [Staphylococcus
           pseudintermedius HKU10-03]
          Length = 153

 Score = 69.2 bits (169), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 27/116 (23%), Positives = 43/116 (37%), Gaps = 18/116 (15%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRE-------------- 46
           ++    FM+ +   A  +     + VGA    +N+II+   N +                
Sbjct: 4   IQWHEYFMAQSHLLALRSTCTR-LSVGATITKDNRIIAGGYNGSVSGEVHCIDEGCLMEG 62

Query: 47  -LKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
                T HAE+ AI    +           +YVT  PC  C  +I  A I+ +YY 
Sbjct: 63  GHCIRTIHAEMNAILQCSKQGVST--ENATIYVTHFPCLNCTKSIIQAGIKTIYYA 116


>gi|94991124|ref|YP_599224.1| ComE operon protein 2 [Streptococcus pyogenes MGAS10270]
 gi|94544632|gb|ABF34680.1| ComE operon protein 2 [Streptococcus pyogenes MGAS10270]
          Length = 170

 Score = 69.2 bits (169), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 25/90 (27%), Positives = 36/90 (40%), Gaps = 17/90 (18%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKD---------------VTAHAEILAIRMGCRILSQEI 70
           VGAV V +N+II+   N      D                T HAE+ A+    +      
Sbjct: 44  VGAVLVKDNRIIATGYNGGVSATDNCNEAGHYMEDGHCIRTVHAEMNALIQCAKEGISTD 103

Query: 71  LPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
               ++YVT  PC  C  A+  A I ++ Y
Sbjct: 104 --GTEIYVTHFPCINCTKALLQAGITKITY 131


>gi|34541467|ref|NP_905946.1| cytidine/deoxycytidylate deaminase family protein [Porphyromonas
           gingivalis W83]
 gi|188995653|ref|YP_001929905.1| putative deoxycytidylate deaminase [Porphyromonas gingivalis ATCC
           33277]
 gi|34397784|gb|AAQ66845.1| cytidine/deoxycytidylate deaminase family protein [Porphyromonas
           gingivalis W83]
 gi|188595333|dbj|BAG34308.1| putative deoxycytidylate deaminase [Porphyromonas gingivalis ATCC
           33277]
          Length = 151

 Score = 69.2 bits (169), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 28/112 (25%), Positives = 44/112 (39%), Gaps = 15/112 (13%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRN--------RELKDVT- 51
           ++    ++  A   A+N+       VGA+ V    IIS   N           +  +VT 
Sbjct: 13  LELDKRYLRMARIWAENSYCERRK-VGALIVKEQMIISDGYNGTPAGFENICEDENNVTK 71

Query: 52  ---AHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
               HAE  AI       +        +Y+T  PC  CA  I  ++I+R+ Y
Sbjct: 72  PYVLHAEANAITKVAGSTNNS--SGATIYITAAPCIECAKLIIQSKIKRVVY 121


>gi|302307964|ref|NP_984770.2| AEL091Cp [Ashbya gossypii ATCC 10895]
 gi|299789245|gb|AAS52594.2| AEL091Cp [Ashbya gossypii ATCC 10895]
          Length = 609

 Score = 69.2 bits (169), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 33/150 (22%), Positives = 59/150 (39%), Gaps = 16/150 (10%)

Query: 1   MKKGNVFMSCALEEAQNA-ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
           +++   FM  A+E+A+     +    VGAV V   +I++   +R  E      HAE  A+
Sbjct: 459 LEQHGDFMRLAIEQAKKCPPAKTSFSVGAVLVNGTEILATGYSRELEGN---THAEQCAL 515

Query: 60  RMGCRILSQEILP-EVDLYVTLEPCT-------MCAAAIS--LARIRRLYYGASNPKGGG 109
           +        + +P    +Y T+EPC+        C   I      I  ++ G   P    
Sbjct: 516 QKYFEQHKTDKVPIGTVIYTTMEPCSLRLSGNKPCVERIICQQGNITAVFVGVLEPDN-F 574

Query: 110 IENGTQFYTLATCHHSPEIYPGISEQRSRQ 139
           ++N T    L        + PG  ++   +
Sbjct: 575 VKNNTSRALLEQHGIDYILVPGF-QEECTE 603


>gi|221106915|ref|XP_002154094.1| PREDICTED: similar to dCMP deaminase [Hydra magnipapillata]
          Length = 203

 Score = 69.2 bits (169), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 36/150 (24%), Positives = 53/150 (35%), Gaps = 35/150 (23%)

Query: 5   NVFMSCALEEAQNAALRNEIPV---GAVAVLN-NKIISRAGNRN---------------- 44
           + FM+ A   AQ +      PV   GA  V N NKI+    N                  
Sbjct: 27  DYFMAIAFLSAQRSKD----PVTQVGACIVNNENKIVGIGYNGMPIGCSDEVLPWSRIGE 82

Query: 45  --RELKDV-TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
              E K     HAE+ A+       +   + +  +Y TL PC  CA  I  +RI+ + Y 
Sbjct: 83  SFMETKYAYVCHAELNAVLN----KNSADVQDCIIYTTLFPCNECAKIILQSRIKEIVYY 138

Query: 102 A----SNPKGGGIENGTQFYTLATCHHSPE 127
           +      P+    E       +    H P+
Sbjct: 139 SNKYKDRPETQAAEKMFDLAGIKHRQHQPK 168


>gi|290579815|ref|YP_003484207.1| putative deoxycytidylate deaminase [Streptococcus mutans NN2025]
 gi|254996714|dbj|BAH87315.1| putative deoxycytidylate deaminase [Streptococcus mutans NN2025]
          Length = 150

 Score = 69.2 bits (169), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 25/90 (27%), Positives = 37/90 (41%), Gaps = 17/90 (18%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKD---------------VTAHAEILAIRMGCRILSQEI 70
           VGAV V NN+II+   N      D                T HAE+ A+    +      
Sbjct: 29  VGAVLVKNNRIIATGYNGGVADTDNCDDVGHEMEDGHCIRTVHAEMNALIQCAKEGISAN 88

Query: 71  LPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
               ++YVT  PC  C  A+  A ++++ Y
Sbjct: 89  --NTEIYVTHFPCINCTKALLQAGVKKITY 116


>gi|51891218|ref|YP_073909.1| dCMP deaminase [Symbiobacterium thermophilum IAM 14863]
 gi|51854907|dbj|BAD39065.1| dCMP deaminase [Symbiobacterium thermophilum IAM 14863]
          Length = 144

 Score = 69.2 bits (169), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 30/112 (26%), Positives = 39/112 (34%), Gaps = 18/112 (16%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGN--------------RNRELKD 49
              FM  A   A+ +       VG V V + +I++   N                 +   
Sbjct: 7   DEYFMELAQVVAKRSTCNRRK-VGTVLVRDKRILTTGYNGSPSGLPHCTDVGCLVVDGHC 65

Query: 50  VTA-HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
           V A HAE  AI      L    L     YVT  PC  CA  +  A I R+ Y
Sbjct: 66  VRAIHAEQNAIIQAA--LHGITLKGATCYVTSSPCVHCAKMLIAAGIERIVY 115


>gi|15607968|ref|NP_215343.1| deaminase [Mycobacterium tuberculosis H37Rv]
 gi|31792016|ref|NP_854509.1| deaminase [Mycobacterium bovis AF2122/97]
 gi|121636752|ref|YP_976975.1| putative deaminase [Mycobacterium bovis BCG str. Pasteur 1173P2]
 gi|148660606|ref|YP_001282129.1| putative deaminase [Mycobacterium tuberculosis H37Ra]
 gi|148822035|ref|YP_001286788.1| deaminase [Mycobacterium tuberculosis F11]
 gi|167967516|ref|ZP_02549793.1| hypothetical deaminase [Mycobacterium tuberculosis H37Ra]
 gi|215402619|ref|ZP_03414800.1| deaminase [Mycobacterium tuberculosis 02_1987]
 gi|215410407|ref|ZP_03419215.1| deaminase [Mycobacterium tuberculosis 94_M4241A]
 gi|215429679|ref|ZP_03427598.1| deaminase [Mycobacterium tuberculosis EAS054]
 gi|219556687|ref|ZP_03535763.1| deaminase [Mycobacterium tuberculosis T17]
 gi|224989223|ref|YP_002643910.1| putative deaminase [Mycobacterium bovis BCG str. Tokyo 172]
 gi|253797775|ref|YP_003030776.1| deaminase [Mycobacterium tuberculosis KZN 1435]
 gi|254231141|ref|ZP_04924468.1| hypothetical protein TBCG_00818 [Mycobacterium tuberculosis C]
 gi|254363766|ref|ZP_04979812.1| hypothetical deaminase [Mycobacterium tuberculosis str. Haarlem]
 gi|260199843|ref|ZP_05767334.1| deaminase [Mycobacterium tuberculosis T46]
 gi|260204018|ref|ZP_05771509.1| deaminase [Mycobacterium tuberculosis K85]
 gi|289442232|ref|ZP_06431976.1| deaminase [Mycobacterium tuberculosis T46]
 gi|289553086|ref|ZP_06442296.1| deaminase [Mycobacterium tuberculosis KZN 605]
 gi|289568782|ref|ZP_06449009.1| deaminase [Mycobacterium tuberculosis T17]
 gi|289573447|ref|ZP_06453674.1| deaminase [Mycobacterium tuberculosis K85]
 gi|289744553|ref|ZP_06503931.1| deaminase [Mycobacterium tuberculosis 02_1987]
 gi|289752878|ref|ZP_06512256.1| hypothetical deaminase [Mycobacterium tuberculosis EAS054]
 gi|289756916|ref|ZP_06516294.1| deaminase [Mycobacterium tuberculosis T85]
 gi|289760958|ref|ZP_06520336.1| deaminase [Mycobacterium tuberculosis GM 1503]
 gi|294996308|ref|ZP_06801999.1| deaminase [Mycobacterium tuberculosis 210]
 gi|297633340|ref|ZP_06951120.1| deaminase [Mycobacterium tuberculosis KZN 4207]
 gi|297730324|ref|ZP_06959442.1| deaminase [Mycobacterium tuberculosis KZN R506]
 gi|298524324|ref|ZP_07011733.1| hypothetical deaminase [Mycobacterium tuberculosis 94_M4241A]
 gi|306774951|ref|ZP_07413288.1| deaminase [Mycobacterium tuberculosis SUMu001]
 gi|306782137|ref|ZP_07420474.1| deaminase [Mycobacterium tuberculosis SUMu002]
 gi|306783494|ref|ZP_07421816.1| deaminase [Mycobacterium tuberculosis SUMu003]
 gi|306787858|ref|ZP_07426180.1| deaminase [Mycobacterium tuberculosis SUMu004]
 gi|306794851|ref|ZP_07433153.1| deaminase [Mycobacterium tuberculosis SUMu005]
 gi|306796597|ref|ZP_07434899.1| deaminase [Mycobacterium tuberculosis SUMu006]
 gi|306802455|ref|ZP_07439123.1| deaminase [Mycobacterium tuberculosis SUMu008]
 gi|306806664|ref|ZP_07443332.1| deaminase [Mycobacterium tuberculosis SUMu007]
 gi|306966863|ref|ZP_07479524.1| deaminase [Mycobacterium tuberculosis SUMu009]
 gi|306971054|ref|ZP_07483715.1| deaminase [Mycobacterium tuberculosis SUMu010]
 gi|307078786|ref|ZP_07487956.1| deaminase [Mycobacterium tuberculosis SUMu011]
 gi|307083347|ref|ZP_07492460.1| deaminase [Mycobacterium tuberculosis SUMu012]
 gi|313657649|ref|ZP_07814529.1| deaminase [Mycobacterium tuberculosis KZN V2475]
 gi|2916886|emb|CAA17634.1| POSSIBLE DEAMINASE [Mycobacterium tuberculosis H37Rv]
 gi|31617603|emb|CAD93713.1| POSSIBLE DEAMINASE [Mycobacterium bovis AF2122/97]
 gi|121492399|emb|CAL70867.1| Possible deaminase [Mycobacterium bovis BCG str. Pasteur 1173P2]
 gi|124600200|gb|EAY59210.1| hypothetical protein TBCG_00818 [Mycobacterium tuberculosis C]
 gi|134149280|gb|EBA41325.1| hypothetical deaminase [Mycobacterium tuberculosis str. Haarlem]
 gi|148504758|gb|ABQ72567.1| putative deaminase [Mycobacterium tuberculosis H37Ra]
 gi|148720562|gb|ABR05187.1| hypothetical deaminase [Mycobacterium tuberculosis F11]
 gi|224772336|dbj|BAH25142.1| putative deaminase [Mycobacterium bovis BCG str. Tokyo 172]
 gi|253319279|gb|ACT23882.1| deaminase [Mycobacterium tuberculosis KZN 1435]
 gi|289415151|gb|EFD12391.1| deaminase [Mycobacterium tuberculosis T46]
 gi|289437718|gb|EFD20211.1| deaminase [Mycobacterium tuberculosis KZN 605]
 gi|289537878|gb|EFD42456.1| deaminase [Mycobacterium tuberculosis K85]
 gi|289542536|gb|EFD46184.1| deaminase [Mycobacterium tuberculosis T17]
 gi|289685081|gb|EFD52569.1| deaminase [Mycobacterium tuberculosis 02_1987]
 gi|289693465|gb|EFD60894.1| hypothetical deaminase [Mycobacterium tuberculosis EAS054]
 gi|289708464|gb|EFD72480.1| deaminase [Mycobacterium tuberculosis GM 1503]
 gi|289712480|gb|EFD76492.1| deaminase [Mycobacterium tuberculosis T85]
 gi|298494118|gb|EFI29412.1| hypothetical deaminase [Mycobacterium tuberculosis 94_M4241A]
 gi|308216505|gb|EFO75904.1| deaminase [Mycobacterium tuberculosis SUMu001]
 gi|308325158|gb|EFP14009.1| deaminase [Mycobacterium tuberculosis SUMu002]
 gi|308331715|gb|EFP20566.1| deaminase [Mycobacterium tuberculosis SUMu003]
 gi|308335513|gb|EFP24364.1| deaminase [Mycobacterium tuberculosis SUMu004]
 gi|308336856|gb|EFP25707.1| deaminase [Mycobacterium tuberculosis SUMu005]
 gi|308342990|gb|EFP31841.1| deaminase [Mycobacterium tuberculosis SUMu006]
 gi|308346873|gb|EFP35724.1| deaminase [Mycobacterium tuberculosis SUMu007]
 gi|308350814|gb|EFP39665.1| deaminase [Mycobacterium tuberculosis SUMu008]
 gi|308355447|gb|EFP44298.1| deaminase [Mycobacterium tuberculosis SUMu009]
 gi|308359403|gb|EFP48254.1| deaminase [Mycobacterium tuberculosis SUMu010]
 gi|308363308|gb|EFP52159.1| deaminase [Mycobacterium tuberculosis SUMu011]
 gi|308366959|gb|EFP55810.1| deaminase [Mycobacterium tuberculosis SUMu012]
 gi|326904953|gb|EGE51886.1| deaminase [Mycobacterium tuberculosis W-148]
 gi|328457555|gb|AEB02978.1| deaminase [Mycobacterium tuberculosis KZN 4207]
          Length = 140

 Score = 69.2 bits (169), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 20/55 (36%), Positives = 25/55 (45%)

Query: 46  ELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
           +  D TAHAE LAIR  C  L  E L    L V   PC MC  ++       + +
Sbjct: 13  QTNDPTAHAESLAIRAACTKLGTEHLVGTTLNVLAHPCPMCYGSLYYCSPDEVVF 67


>gi|330799921|ref|XP_003287989.1| hypothetical protein DICPUDRAFT_33347 [Dictyostelium purpureum]
 gi|325082013|gb|EGC35510.1| hypothetical protein DICPUDRAFT_33347 [Dictyostelium purpureum]
          Length = 182

 Score = 69.2 bits (169), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 25/106 (23%), Positives = 45/106 (42%), Gaps = 12/106 (11%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISR-AGNRNRELKDVTAHAEILAIRM- 61
              +M  AL+  +   +  +   GA  V  N  +   + N+    +    H EI AI   
Sbjct: 49  HEKYMKIALD--RVIEVNGK--FGAAIVHKNGTLMCVSVNQGSVSR--IYHGEIAAIINC 102

Query: 62  ----GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
                 + + Q    +  +Y T EPC MC+AAI  ++  ++ +G+ 
Sbjct: 103 TNIFASKGIVQPTWEDYYIYTTGEPCPMCSAAIMWSKFDKVIFGSY 148


>gi|228993069|ref|ZP_04152992.1| ComE operon protein 2 [Bacillus pseudomycoides DSM 12442]
 gi|228999119|ref|ZP_04158701.1| ComE operon protein 2 [Bacillus mycoides Rock3-17]
 gi|229006667|ref|ZP_04164301.1| ComE operon protein 2 [Bacillus mycoides Rock1-4]
 gi|228754528|gb|EEM03939.1| ComE operon protein 2 [Bacillus mycoides Rock1-4]
 gi|228760736|gb|EEM09700.1| ComE operon protein 2 [Bacillus mycoides Rock3-17]
 gi|228766717|gb|EEM15357.1| ComE operon protein 2 [Bacillus pseudomycoides DSM 12442]
          Length = 185

 Score = 69.2 bits (169), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 24/91 (26%), Positives = 37/91 (40%), Gaps = 17/91 (18%)

Query: 26  VGAVAVLNNKIISRAGNRNRELK-----DV----------TAHAEILAIRMGCRILSQEI 70
           VGA  V + +II+   N +         D           T HAE+ A+    +  ++  
Sbjct: 28  VGATIVRDKRIIAGGYNGSITGGVHCIDDGCYIIDNHCVRTIHAEMNALLQCAKFGAKT- 86

Query: 71  LPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
               ++YVT  PC  C  AI  + I  +YY 
Sbjct: 87  -EGAEIYVTHFPCLQCCKAIIQSGITAVYYA 116


>gi|77919044|ref|YP_356859.1| deoxycytidylate deaminase [Pelobacter carbinolicus DSM 2380]
 gi|77545127|gb|ABA88689.1| deoxycytidylate deaminase [Pelobacter carbinolicus DSM 2380]
          Length = 158

 Score = 69.2 bits (169), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 31/127 (24%), Positives = 49/127 (38%), Gaps = 32/127 (25%)

Query: 5   NVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGNRN-------------RELKD 49
             FM  A   A+ +    R    VGAV V +  I++   N               R+L++
Sbjct: 8   EYFMEIARLVARRSTCLRRQ---VGAVLVKDKNILATGYNGTPSGLRHCSEVGCLRQLQN 64

Query: 50  VTA----------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLY 99
           V +          HAE  AI    +  +   +    L+ T  PC +C+  I  A IR++ 
Sbjct: 65  VPSGERHELCRGLHAEQNAIIQAAKHGTN--ISGAILFCTNTPCVICSKMIINAGIRQVV 122

Query: 100 Y--GASN 104
           Y  G  +
Sbjct: 123 YLDGYPD 129


>gi|227824235|ref|ZP_03989067.1| dCMP deaminase [Acidaminococcus sp. D21]
 gi|226904734|gb|EEH90652.1| dCMP deaminase [Acidaminococcus sp. D21]
          Length = 153

 Score = 69.2 bits (169), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 30/134 (22%), Positives = 46/134 (34%), Gaps = 33/134 (24%)

Query: 1   MKK---GNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGN------------- 42
           MK+    + FM  A   A+ +    R    VGAV V + +I++   N             
Sbjct: 1   MKRPDWDSYFMEIAEVVAKRSTCLRRQ---VGAVLVKDRQILATGYNGTPKGIAHCEEVG 57

Query: 43  -RNRELKDVTA---------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISL 92
               +L   +          HAE  A+                LY T +PC +C+  +  
Sbjct: 58  CLREQLHVPSGQNHELCRGIHAEQNAVIQAAVNGVST--KGATLYCTHQPCVVCSKILIN 115

Query: 93  ARIRRLYYGASNPK 106
           A I R+ Y    P 
Sbjct: 116 AGIERIVYAHPYPD 129


>gi|296140262|ref|YP_003647505.1| riboflavin biosynthesis protein RibD [Tsukamurella paurometabola
           DSM 20162]
 gi|296028396|gb|ADG79166.1| riboflavin biosynthesis protein RibD [Tsukamurella paurometabola
           DSM 20162]
          Length = 332

 Score = 69.2 bits (169), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 28/112 (25%), Positives = 42/112 (37%), Gaps = 16/112 (14%)

Query: 8   MSCALEE--AQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           ++ A+EE  A         PVGAV +  +  ++    R         HAE++A+      
Sbjct: 11  LTLAIEESVAARGVSTPNPPVGAVILAADGTVA-GRGRTAPAGGP--HAEVVALAEAGDA 67

Query: 66  LSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIE 111
                       VTLEPC        C  A+  A I R+ Y A++P      
Sbjct: 68  A-----RGGTAVVTLEPCDHTGRTGPCTQALIAAGIARVAYAAADPNPVAAG 114


>gi|269793169|ref|YP_003318073.1| CMP/dCMP deaminase zinc-binding protein [Thermanaerovibrio
           acidaminovorans DSM 6589]
 gi|269100804|gb|ACZ19791.1| CMP/dCMP deaminase zinc-binding protein [Thermanaerovibrio
           acidaminovorans DSM 6589]
          Length = 159

 Score = 69.2 bits (169), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 28/120 (23%), Positives = 40/120 (33%), Gaps = 26/120 (21%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGN--------------RNRELKD 49
              F+  A + A  +       VGAV V +  I+S   N                 +L  
Sbjct: 16  DVYFLKIAEQVATRSTCLR-RAVGAVLVRDQYIVSTGYNGAPRGTTHCLDLGCLREQLGV 74

Query: 50  VTA---------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
            +          H EI AI     +          LY T EPC+ C  A+  A IR + +
Sbjct: 75  PSGQRHEICRGSHGEINAICQAAAMGVST--AGCTLYCTHEPCSFCTKALIGAGIREVVF 132


>gi|22537844|ref|NP_688695.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus
           agalactiae 2603V/R]
 gi|25011789|ref|NP_736184.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus
           agalactiae NEM316]
 gi|76788185|ref|YP_330315.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus
           agalactiae A909]
 gi|77406599|ref|ZP_00783646.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus
           agalactiae H36B]
 gi|77409272|ref|ZP_00785978.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus
           agalactiae COH1]
 gi|77412446|ref|ZP_00788751.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus
           agalactiae CJB111]
 gi|77413936|ref|ZP_00790111.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus
           agalactiae 515]
 gi|22534739|gb|AAN00568.1|AE014269_12 cytidine/deoxycytidylate deaminase family protein [Streptococcus
           agalactiae 2603V/R]
 gi|24413330|emb|CAD47409.1| Unknown [Streptococcus agalactiae NEM316]
 gi|76563242|gb|ABA45826.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus
           agalactiae A909]
 gi|77160021|gb|EAO71157.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus
           agalactiae 515]
 gi|77161510|gb|EAO72516.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus
           agalactiae CJB111]
 gi|77172104|gb|EAO75267.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus
           agalactiae COH1]
 gi|77174792|gb|EAO77614.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus
           agalactiae H36B]
 gi|319745690|gb|EFV97989.1| cytidine/deoxycytidylate deaminase [Streptococcus agalactiae ATCC
           13813]
          Length = 150

 Score = 69.2 bits (169), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 33/126 (26%), Positives = 47/126 (37%), Gaps = 19/126 (15%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKD---------------VTAHAEILAIRMGCRILSQEI 70
           VGAV V NN+II+   N      D                T HAE+ A+    +      
Sbjct: 28  VGAVLVKNNRIIATGYNGGVSETDNCNEVGHYMEDGHCIRTVHAEMNALIQCAKEGISTN 87

Query: 71  LPEVDLYVTLEPCTMCAAAISLARIRRLYY-GASNPKGGGIENGTQFYTLATCHHSPEIY 129
               ++YVT  PC  C  A+  A ++++ Y     P    IE           H  PE+ 
Sbjct: 88  --NTEIYVTHFPCINCTKALLQAGVKKITYKANYRPHPFAIELMEAKGVAYVQHDVPEVT 145

Query: 130 PGISEQ 135
            G  E+
Sbjct: 146 LG-MEE 150


>gi|323720752|gb|EGB29824.1| deaminase [Mycobacterium tuberculosis CDC1551A]
          Length = 159

 Score = 69.2 bits (169), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 20/55 (36%), Positives = 25/55 (45%)

Query: 46  ELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
           +  D TAHAE LAIR  C  L  E L    L V   PC MC  ++       + +
Sbjct: 32  QTNDPTAHAESLAIRAACTKLGTEHLVGTTLNVLAHPCPMCYGSLYYCSPDEVVF 86


>gi|326336121|ref|ZP_08202293.1| cytidine/deoxycytidylate deaminase [Capnocytophaga sp. oral taxon
           338 str. F0234]
 gi|325691630|gb|EGD33597.1| cytidine/deoxycytidylate deaminase [Capnocytophaga sp. oral taxon
           338 str. F0234]
          Length = 150

 Score = 69.2 bits (169), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 31/116 (26%), Positives = 43/116 (37%), Gaps = 19/116 (16%)

Query: 1   MKK----GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDV------ 50
           M+K       +M  A E A+ +  + +  VGA+ V +  IIS   N      D       
Sbjct: 1   MEKQERYDRAYMRMAQEWAKLSYSQRKQ-VGAIIVKDRMIISDGYNGTPTGFDNCCEDEQ 59

Query: 51  ------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
                   HAE  AI                LY+T+ PC  C+  I  A I R+ Y
Sbjct: 60  GQTLWYVLHAEANAILKVAASTQS--CAGATLYITMSPCKECSKLIHQAGIIRVVY 113


>gi|323142103|ref|ZP_08076951.1| ComE operon protein 2 family protein [Phascolarctobacterium sp. YIT
           12067]
 gi|322413490|gb|EFY04361.1| ComE operon protein 2 family protein [Phascolarctobacterium sp. YIT
           12067]
          Length = 152

 Score = 69.2 bits (169), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 27/126 (21%), Positives = 42/126 (33%), Gaps = 26/126 (20%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGN--------------RNRELKD 49
            + FM  A   +  +       VGAV V N +I++   N                 +L  
Sbjct: 10  DDYFMEIARVVSSRSTCMR-RSVGAVIVKNKQIVATGYNGTPKDLPHCEVTGCLREQLHV 68

Query: 50  VTA---------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
            +          HAE  A+           +    LY T +PC +C   +  A I+R+ Y
Sbjct: 69  PSGQMHELCRGIHAEQNAVVQAA--YHGVSVNGGTLYCTHQPCVVCTKILINAGIKRIVY 126

Query: 101 GASNPK 106
               P 
Sbjct: 127 ANPYPD 132


>gi|296283379|ref|ZP_06861377.1| riboflavin-specific deaminase/reductase [Citromicrobium
           bathyomarinum JL354]
          Length = 323

 Score = 69.2 bits (169), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 25/104 (24%), Positives = 36/104 (34%), Gaps = 16/104 (15%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC-- 83
           VG V V   +++ R     +       HAE +A+ M             D+Y TLEPC  
Sbjct: 32  VGCVIVQAGRVVGRGW--TQAGGRP--HAEAMALEMAGDAA-----TGADVYATLEPCAH 82

Query: 84  -----TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
                  C   +  AR  R+  G  +P       G +    A  
Sbjct: 83  QSPRGPACTDRLIEARPARVVIGQIDPDPRTAGQGIERLHAAGI 126


>gi|149237721|ref|XP_001524737.1| DRAP deaminase [Lodderomyces elongisporus NRRL YB-4239]
 gi|146451334|gb|EDK45590.1| DRAP deaminase [Lodderomyces elongisporus NRRL YB-4239]
          Length = 622

 Score = 69.2 bits (169), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 25/86 (29%), Positives = 40/86 (46%), Gaps = 6/86 (6%)

Query: 1   MKKGNVFMSCALEEAQN-AALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
           +     +M  AL+EA+     + +  VG V VL+ ++IS   +R  E      HAE  A+
Sbjct: 452 IDYNRKYMEMALDEARKCGETQTQFNVGCVLVLDGEVISTGHSRELEGN---THAEQCAL 508

Query: 60  RMG-CRILSQEILP-EVDLYVTLEPC 83
                +      +P   +LY T+EPC
Sbjct: 509 EKYFAKNGGIRDVPLGTELYTTMEPC 534


>gi|319939068|ref|ZP_08013432.1| ComE operon protein 2 family protein [Streptococcus anginosus
           1_2_62CV]
 gi|319812118|gb|EFW08384.1| ComE operon protein 2 family protein [Streptococcus anginosus
           1_2_62CV]
          Length = 155

 Score = 68.8 bits (168), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 30/112 (26%), Positives = 42/112 (37%), Gaps = 19/112 (16%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELK-----------DV-- 50
              F + AL  A  +  +    VGAV V +NK+IS   N +               D   
Sbjct: 9   DEYFAAQALLIANRSTCKR-ASVGAVIVKDNKVISTGYNGSVSGTEHCIDHECLIVDGHC 67

Query: 51  --TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
             T HAE+ AI  G      +      +YVT  PC  C   +     +R+ Y
Sbjct: 68  VRTLHAEVNAILQGAERGIPK---GFTVYVTHFPCLNCTKQLLQVGCKRVVY 116


>gi|87200870|ref|YP_498127.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Novosphingobium aromaticivorans DSM 12444]
 gi|87136551|gb|ABD27293.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Novosphingobium
           aromaticivorans DSM 12444]
          Length = 323

 Score = 68.8 bits (168), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 25/121 (20%), Positives = 38/121 (31%), Gaps = 18/121 (14%)

Query: 3   KGNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
               ++  A           R    VGAV V +  ++ R     +       HAE  A+ 
Sbjct: 5   DDLRWLDAAASLGARGRPLSRPNPAVGAVIVNDGVVVGRGW--TQAGGRP--HAEAGALM 60

Query: 61  MGCRILSQEILPEVDLYVTLEPC-------TMCAAAISLARIRRLYYGASNPKGGGIENG 113
                          LYVTLEPC         C + +  + + R+  G  +P       G
Sbjct: 61  AAGDAAQ-----GATLYVTLEPCAHASERGPSCTSLVLKSGLARVVIGIEDPDPRTAGGG 115

Query: 114 T 114
            
Sbjct: 116 I 116


>gi|209809706|ref|YP_002265245.1| putative cytidine and deoxycytidylate deaminase [Aliivibrio
           salmonicida LFI1238]
 gi|21311445|gb|AAM46726.1|AF452135_11 RibG [Aliivibrio salmonicida]
 gi|208011269|emb|CAQ81710.1| putative cytidine and deoxycytidylate deaminase [Aliivibrio
           salmonicida LFI1238]
          Length = 147

 Score = 68.8 bits (168), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 27/87 (31%), Positives = 35/87 (40%), Gaps = 18/87 (20%)

Query: 26  VGAVAVLNNKIISRAGN-------------RNRELKDVTAHAEILAIRMGCRILSQEILP 72
           VGAV   +N+I+S   N                     T HAE  AI    R      L 
Sbjct: 27  VGAVITKHNRIVSVGFNGYPHGVSDSADTDDRELKYLKTLHAEENAILFAKR-----DLE 81

Query: 73  EVDLYVTLEPCTMCAAAISLARIRRLY 99
           + D++VT  PC  CAA I    I ++Y
Sbjct: 82  DCDIWVTHFPCPNCAAKIIQTGISKVY 108


>gi|323485387|ref|ZP_08090735.1| hypothetical protein HMPREF9474_02486 [Clostridium symbiosum
           WAL-14163]
 gi|323694149|ref|ZP_08108328.1| dCMP deaminase [Clostridium symbiosum WAL-14673]
 gi|323401250|gb|EGA93600.1| hypothetical protein HMPREF9474_02486 [Clostridium symbiosum
           WAL-14163]
 gi|323501866|gb|EGB17749.1| dCMP deaminase [Clostridium symbiosum WAL-14673]
          Length = 177

 Score = 68.8 bits (168), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 40/138 (28%), Positives = 55/138 (39%), Gaps = 35/138 (25%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVL-NNKIISRAGN-------------- 42
           +     FM  A    + +A+R++ P   VGA  V  +NKI+S   N              
Sbjct: 22  ITWDEYFMGVA----KLSAMRSKDPSTQVGACIVSGDNKILSMGYNGFPKGCSDDEFPWG 77

Query: 43  RNRELKDV-------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARI 95
           +  E +D        T H+E+ AI           L    LYVTL PC  CA AI  A I
Sbjct: 78  KELETEDPYNAKYFYTTHSELNAILN----YRGGSLEGSKLYVTLFPCNECAKAIIQAGI 133

Query: 96  RRLYYGASNPKGGGIENG 113
           + L Y   + K G   + 
Sbjct: 134 KTLIY--DSDKYGATPSV 149


>gi|323704821|ref|ZP_08116398.1| CMP/dCMP deaminase, zinc-binding [Thermoanaerobacterium
           xylanolyticum LX-11]
 gi|323535747|gb|EGB25521.1| CMP/dCMP deaminase, zinc-binding [Thermoanaerobacterium
           xylanolyticum LX-11]
          Length = 172

 Score = 68.8 bits (168), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 28/98 (28%), Positives = 37/98 (37%), Gaps = 25/98 (25%)

Query: 26  VGAVAVLNNKIISRAGN--------------RNRELKDVTA---------HAEILAIRMG 62
           VGAV V +  IIS   N                  L   +          HAE  AI   
Sbjct: 51  VGAVIVKDKHIISTGYNGAPTGLKHCEEVGCMRESLNIPSGERHELCRGTHAEQNAIIQA 110

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
              L+     +  +YV+  PC+MCA  I  A I+R+ Y
Sbjct: 111 A--LNGVSTKDATIYVSASPCSMCAKMIINAGIKRVVY 146


>gi|294793764|ref|ZP_06758901.1| probable deoxycytidylate deaminase [Veillonella sp. 3_1_44]
 gi|294455334|gb|EFG23706.1| probable deoxycytidylate deaminase [Veillonella sp. 3_1_44]
          Length = 159

 Score = 68.8 bits (168), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 35/121 (28%), Positives = 46/121 (38%), Gaps = 29/121 (23%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVL-NNKIISRAGN---RNRELKDVTA- 52
           +     FM  A+  AQ +      P   VGA  V  +NKI+S   N    N    D T  
Sbjct: 8   ISWNEYFMGVAILAAQRSKD----PNTQVGACIVSNDNKILSIGYNGMPLNCSDDDFTWE 63

Query: 53  -------------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLY 99
                        H+E+ AI           L    +YVTL PC  CA AI  + I+ + 
Sbjct: 64  RDTADDNKYFYTVHSELNAILN----YRGGSLEGSKIYVTLFPCNECAKAIIQSGIKAVI 119

Query: 100 Y 100
           Y
Sbjct: 120 Y 120


>gi|302345385|ref|YP_003813738.1| dCMP deaminase family protein [Prevotella melaninogenica ATCC
           25845]
 gi|302149570|gb|ADK95832.1| dCMP deaminase family protein [Prevotella melaninogenica ATCC
           25845]
          Length = 166

 Score = 68.8 bits (168), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 33/110 (30%), Positives = 43/110 (39%), Gaps = 15/110 (13%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRN--------RELKDVT---- 51
              ++  A   A+N+  +    VGA+ V +  IIS   N           +   VT    
Sbjct: 25  DYRYLRMARIWAENSYCKR-RQVGALVVKDKMIISDGYNGTPSGFENICEDESGVTKPYV 83

Query: 52  AHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
            HAE  AI    R  +        LYVT  PC  CA  I  A IRR+ Y 
Sbjct: 84  LHAEANAITKLARSGNNS--EGSTLYVTASPCIECAKLIIQAGIRRVVYA 131


>gi|330833249|ref|YP_004402074.1| deoxycytidylate deaminase [Streptococcus suis ST3]
 gi|329307472|gb|AEB81888.1| deoxycytidylate deaminase [Streptococcus suis ST3]
          Length = 155

 Score = 68.8 bits (168), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 29/112 (25%), Positives = 41/112 (36%), Gaps = 19/112 (16%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRE---------------LK 48
              F + AL  A  A  +    VGAV V +NK+I+   N +                   
Sbjct: 9   DEYFAAQALLIANRATCKRAK-VGAVLVKDNKVIATGYNGSVSGTEHCLDQECLMIDGHC 67

Query: 49  DVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
             T HAE+ AI  G      +       YVT  PC  C+  +     +R+ Y
Sbjct: 68  ARTLHAEVNAILQGAERGIPK---GFTAYVTHFPCLNCSKQLLQVGCKRVVY 116


>gi|331223607|ref|XP_003324476.1| hypothetical protein PGTG_05282 [Puccinia graminis f. sp. tritici
           CRL 75-36-700-3]
 gi|309303466|gb|EFP80057.1| hypothetical protein PGTG_05282 [Puccinia graminis f. sp. tritici
           CRL 75-36-700-3]
          Length = 406

 Score = 68.8 bits (168), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 14/58 (24%), Positives = 31/58 (53%)

Query: 69  EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
            +L    ++++ EPC +C+ A+  +RI+ L++ A +P+ GG  +    +     +H  
Sbjct: 328 YLLTNQIVFLSHEPCLLCSMALLHSRIKHLFFLAPSPRSGGCGSVYNVHEQDGLNHKF 385


>gi|288803361|ref|ZP_06408794.1| cytidine/deoxycytidylate deaminase family protein [Prevotella
           melaninogenica D18]
 gi|288334181|gb|EFC72623.1| cytidine/deoxycytidylate deaminase family protein [Prevotella
           melaninogenica D18]
          Length = 166

 Score = 68.8 bits (168), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 33/110 (30%), Positives = 43/110 (39%), Gaps = 15/110 (13%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRN--------RELKDVT---- 51
              ++  A   A+N+  +    VGA+ V +  IIS   N           +   VT    
Sbjct: 25  DYRYLRMARIWAENSYCKR-RQVGALVVKDKMIISDGYNGTPSGFENICEDESGVTKPYV 83

Query: 52  AHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
            HAE  AI    R  +        LYVT  PC  CA  I  A IRR+ Y 
Sbjct: 84  LHAEANAITKLARSGNNS--EGSTLYVTASPCIECAKLIIQAGIRRVVYA 131


>gi|322391647|ref|ZP_08065115.1| cytidine and deoxycytidylate deaminase [Streptococcus peroris ATCC
           700780]
 gi|321145458|gb|EFX40851.1| cytidine and deoxycytidylate deaminase [Streptococcus peroris ATCC
           700780]
          Length = 155

 Score = 68.8 bits (168), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 31/117 (26%), Positives = 40/117 (34%), Gaps = 29/117 (24%)

Query: 4   GNVFMSCALEEA-----QNAALRNEIPVGAVAVLNNKIISRAGNRNRE------LKDV-- 50
              F + AL  A     + A       VGAV V +NK+IS   N +          D   
Sbjct: 9   DEYFAAQALLIANRSTCKRAK------VGAVLVKDNKVISTGYNGSVSGTEHCIDHDCLV 62

Query: 51  -------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
                  T HAE+ AI  G      +       YVT  PC  C   +      R+ Y
Sbjct: 63  IEGHCVRTLHAEVNAILQGAERGVPK---GFTAYVTHFPCLNCTKQLLQVGCERVVY 116


>gi|312866406|ref|ZP_07726624.1| putative ComE operon protein 2 [Streptococcus downei F0415]
 gi|311098100|gb|EFQ56326.1| putative ComE operon protein 2 [Streptococcus downei F0415]
          Length = 151

 Score = 68.8 bits (168), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 30/118 (25%), Positives = 43/118 (36%), Gaps = 22/118 (18%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKD---------------VTAHAEILAIRMGCRILSQEI 70
           VGAV V + +II+   N      D                T HAE+ A+    +      
Sbjct: 30  VGAVLVKDKRIIATGYNGGVSETDNCNEVGHYMEDGHCIRTVHAEMNALIQCAKEGIST- 88

Query: 71  LPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS-NPKGGGIE----NGTQFYTLATCH 123
               ++YVT  PC  C  A+  A I+++ Y A   P    IE     G  +      H
Sbjct: 89  -KNTEIYVTHFPCINCTKALLQAGIKKITYKADYRPNALAIELMEQKGVDYIQHDVPH 145


>gi|222055762|ref|YP_002538124.1| dCMP deaminase [Geobacter sp. FRC-32]
 gi|221565051|gb|ACM21023.1| dCMP deaminase [Geobacter sp. FRC-32]
          Length = 156

 Score = 68.8 bits (168), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 27/128 (21%), Positives = 44/128 (34%), Gaps = 32/128 (25%)

Query: 4   GNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGN--------------RNREL 47
              FM      A+ +    R    VGA+ V +  I++   N                 +L
Sbjct: 7   DEYFMGITHLVAKRSTCLRRQ---VGAIIVKDKNILATGYNGAPSGVSHCLDVGCLREKL 63

Query: 48  KDVTA---------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98
              +          HAE  AI    +  +   +    LY T  PC +C+  I  A I+R+
Sbjct: 64  GIPSGERHELCRGLHAEQNAIIQAAKHGTG--IEGSTLYCTTMPCIICSKMIINAGIKRI 121

Query: 99  YY--GASN 104
            +  G  +
Sbjct: 122 VFEMGYPD 129


>gi|34558827|gb|AAQ75171.1| riboflavin biosynthesis protein [Alvinella pompejana epibiont 7G3]
          Length = 335

 Score = 68.8 bits (168), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 39/183 (21%), Positives = 66/183 (36%), Gaps = 46/183 (25%)

Query: 1   MKKGNVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           M   ++FM  A++ A    L       VGA+  LN ++++   +R       T+HAE+L 
Sbjct: 1   MLTDDIFMRVAIDRAWEYQLITYPNPAVGALVELNGRVLAVEAHREA----GTSHAEVLV 56

Query: 59  IRMGCRILSQEI----------------------LPEVDLYVTLEPC------TMCAAAI 90
           +      LS                              +YVTLEPC        CA  +
Sbjct: 57  LLRAYEELSNRKIEFNRLDANLAHNFLLSLPRGFFSNCSIYVTLEPCSHTGKTPSCATLL 116

Query: 91  SLARIRRLYYGASNP---KGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF-FK 146
           S  + +R+  G  +P     GG+E                      E+ + ++I+ F   
Sbjct: 117 SKLKPKRVVVGTLDPISSHSGGVELLKSVGVEVEVGV--------LEREAEELIEPFIIW 168

Query: 147 ERR 149
           ++R
Sbjct: 169 QKR 171


>gi|307111161|gb|EFN59396.1| hypothetical protein CHLNCDRAFT_137887 [Chlorella variabilis]
          Length = 181

 Score = 68.8 bits (168), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 31/152 (20%), Positives = 53/152 (34%), Gaps = 22/152 (14%)

Query: 2   KKGNVFMSCALEEAQNAALRN--EIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILA 58
           +   + M  ALE A            VG V V  + +++    +    +     HAE+  
Sbjct: 29  EADRLHMRRALELAARGLGATYPNPAVGCVIVDASGRVLGEGFHPRAGM----PHAEV-- 82

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
                   +         YVTLEPC        C+ A+  A + R+  G ++P       
Sbjct: 83  ---YALRAAGRAAAGATAYVTLEPCNHFGRTPPCSRALVAAGVSRVVVGCTDPNPLVGGC 139

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
           G +    A    +     G  +Q   Q+ ++F
Sbjct: 140 GVKTLRDAGIVAAV----GCEQQACYQLNEEF 167


>gi|124805491|ref|XP_001350455.1| conserved Plasmodium protein [Plasmodium falciparum 3D7]
 gi|23496577|gb|AAN36135.1| conserved Plasmodium protein [Plasmodium falciparum 3D7]
          Length = 326

 Score = 68.8 bits (168), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 25/160 (15%), Positives = 54/160 (33%), Gaps = 55/160 (34%)

Query: 27  GAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC----------------------- 63
           G +   N++II+ +G  +        HA +LAI                           
Sbjct: 168 GCIITYNDEIIASSG--DNIKNHPLHHAPMLAIEQVSYKLRHIWLNKQTEKNNLQKKMKI 225

Query: 64  ----RILSQEILPE-----------------------VD---LYVTLEPCTMCAAAISLA 93
               +I +++ L +                             +++ EPC MCA A+  +
Sbjct: 226 IHKQQINNRDSLNDHKHENNKSNHNILIDHIPNDQYLCTNFFAFLSHEPCYMCAMALLHS 285

Query: 94  RIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGIS 133
           RI+ + +   N   G + +  + + +   +H  +++  I 
Sbjct: 286 RIKCVIFDKENKNNGALSSQEKLHCIKNLNHHFKVFKTIR 325


>gi|296448857|ref|ZP_06890691.1| riboflavin biosynthesis protein RibD [Methylosinus trichosporium
           OB3b]
 gi|296253636|gb|EFH00829.1| riboflavin biosynthesis protein RibD [Methylosinus trichosporium
           OB3b]
          Length = 375

 Score = 68.8 bits (168), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 34/146 (23%), Positives = 50/146 (34%), Gaps = 21/146 (14%)

Query: 2   KKGNVFMSCALEEAQNAALR-NEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
           ++ + FM+ AL   +    R    P VGA+ V +  +I+R             HA     
Sbjct: 9   QQDDAFMAAALAFGRRNMGRTGPNPAVGALIVKDGVVIARGATAVGGR----PHA----- 59

Query: 60  RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113
                  + E      LY TLEPC        C  AI  A I R+     +P       G
Sbjct: 60  EAVAVAAAGEAARGATLYATLEPCSHHGATPPCVDAIIGAGIARVVSALEDPDARVAGRG 119

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQ 139
                 A      E+  G+  + +R 
Sbjct: 120 HARLREAG----IEVAVGVRAREARA 141


>gi|18977970|ref|NP_579327.1| dCMP deaminase [Pyrococcus furiosus DSM 3638]
 gi|18893746|gb|AAL81722.1| dCMP deaminase [Pyrococcus furiosus DSM 3638]
          Length = 185

 Score = 68.8 bits (168), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 31/117 (26%), Positives = 38/117 (32%), Gaps = 24/117 (20%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGN---------------R 43
            K   FM  A   +  A      P   VGAVAV +  I++   N                
Sbjct: 21  TKDEYFMLIAKLVSLRATC----PRLRVGAVAVKDGYILATGYNGAPRSMDHCIDKGCIL 76

Query: 44  NRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
                    HAE   I M  R      L    LYVT  PC  C   +  A I+ + Y
Sbjct: 77  VNGHCHRAVHAEQNVIAMAARKGIS--LEGATLYVTHFPCDTCFKLLINAGIKEIVY 131


>gi|195977496|ref|YP_002122740.1| dCMP deaminase; late competence protein ComEB [Streptococcus equi
           subsp. zooepidemicus MGCS10565]
 gi|195974201|gb|ACG61727.1| dCMP deaminase; late competence protein ComEB [Streptococcus equi
           subsp. zooepidemicus MGCS10565]
          Length = 153

 Score = 68.8 bits (168), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 25/90 (27%), Positives = 36/90 (40%), Gaps = 17/90 (18%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKD---------------VTAHAEILAIRMGCRILSQEI 70
           VGAV V +N+II+   N      D                T HAE+ A+    +      
Sbjct: 29  VGAVLVKDNRIIATGYNGGVSATDNCNEAGHYMEEGHCIRTVHAEMNALIQCAKEGIST- 87

Query: 71  LPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
               ++YVT  PC  C  A+  A I ++ Y
Sbjct: 88  -AGTEIYVTHFPCINCTKALLQAGICKITY 116


>gi|293365055|ref|ZP_06611772.1| cytidine and deoxycytidylate deaminase [Streptococcus oralis ATCC
           35037]
 gi|307702235|ref|ZP_07639195.1| comE operon protein 2 [Streptococcus oralis ATCC 35037]
 gi|291316505|gb|EFE56941.1| cytidine and deoxycytidylate deaminase [Streptococcus oralis ATCC
           35037]
 gi|307624248|gb|EFO03225.1| comE operon protein 2 [Streptococcus oralis ATCC 35037]
          Length = 155

 Score = 68.8 bits (168), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 32/117 (27%), Positives = 40/117 (34%), Gaps = 29/117 (24%)

Query: 4   GNVFMSCALEEA-----QNAALRNEIPVGAVAVLNNKIISRAGN--------------RN 44
              F + AL  A     + A       VGAV V +NK+IS   N                
Sbjct: 9   DEYFAAQALLIANRSTCKRAK------VGAVLVKDNKVISTGYNGSVSGTEHCIDHECLV 62

Query: 45  RELKDV-TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
            E   V T HAE+ AI  G              YVT  PC  C   +     +R+ Y
Sbjct: 63  IEGHCVRTLHAEVNAILQGAERGVP---RGFTAYVTHFPCLNCTKQLLQVGCKRVVY 116


>gi|311993209|ref|YP_004010075.1| dCMP deaminase [Enterobacteria phage CC31]
 gi|284178047|gb|ADB81713.1| dCMP deaminase [Enterobacteria phage CC31]
          Length = 188

 Score = 68.8 bits (168), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 35/149 (23%), Positives = 48/149 (32%), Gaps = 51/149 (34%)

Query: 26  VGAVAVLNNKIISRAGN------------------RNRELKDVTA--------------- 52
           VGAV   N +IIS   N                    ++                     
Sbjct: 24  VGAVIEKNGRIISTGYNGSPAGGVNCCDHAEDKGWLVKKPGSGLRQDGPIPKYGLDTKFR 83

Query: 53  ------------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
                       HAE+ AI    R  S   +    +YVTL PC  CA AI+ + I++L Y
Sbjct: 84  AEHSEWSKINEIHAELNAILFAARNGSS--IEGATMYVTLSPCPDCAKAIAQSGIKKLVY 141

Query: 101 GASNPKGGGIENGTQFYTLAT--CHHSPE 127
             +  K   I+        A    HH P+
Sbjct: 142 CETYDKN--IDGWDNILRDAGIEIHHVPK 168


>gi|331703568|ref|YP_004400255.1| deoxycytidylate deaminase [Mycoplasma mycoides subsp. capri LC str.
           95010]
 gi|328802123|emb|CBW54277.1| Deoxycytidylate deaminase (dCMP deaminase) [Mycoplasma mycoides
           subsp. capri LC str. 95010]
          Length = 146

 Score = 68.8 bits (168), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 34/100 (34%), Positives = 46/100 (46%), Gaps = 26/100 (26%)

Query: 26  VGAVAVLN-NKIISRAGNR-NRELKD---V---------------TAHAEILAIRMGCRI 65
           VGA+ V    +I++   N   R + D                    AHAE+ AI     +
Sbjct: 18  VGAIVVNELQQIVATGYNGFPRGVSDDEFPWSKNNEDWLENKYAYVAHAELNAI-----V 72

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNP 105
            S+  L   DLYVTL PC  CA  I  A I+R+YY A++P
Sbjct: 73  SSRSDLSNCDLYVTLFPCNECAKIIIQAGIKRIYY-ANDP 111


>gi|325268984|ref|ZP_08135605.1| cytidine/deoxycytidylate deaminase [Prevotella multiformis DSM
           16608]
 gi|324988605|gb|EGC20567.1| cytidine/deoxycytidylate deaminase [Prevotella multiformis DSM
           16608]
          Length = 175

 Score = 68.8 bits (168), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 33/110 (30%), Positives = 43/110 (39%), Gaps = 15/110 (13%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRN--------RELKDVT---- 51
              ++  A   A+N+  R    VGA+ V +  IIS   N           +   VT    
Sbjct: 26  DYRYLRMARIWAENSYCRR-RQVGALVVKDKMIISDGYNGTPSGFENVCEDEAGVTKPYV 84

Query: 52  AHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
            HAE  AI    R  +        LYVT  PC  C+  I  A IRR+ Y 
Sbjct: 85  LHAEANAITKLARSGNNSD--GSTLYVTASPCIECSKLIIQAGIRRVVYA 132


>gi|227877964|ref|ZP_03995968.1| competence protein ComEB family protein [Lactobacillus crispatus
           JV-V01]
 gi|256844344|ref|ZP_05549830.1| dCMP deaminase [Lactobacillus crispatus 125-2-CHN]
 gi|256849252|ref|ZP_05554685.1| dCMP deaminase [Lactobacillus crispatus MV-1A-US]
 gi|293381479|ref|ZP_06627474.1| putative ComE operon protein 2 [Lactobacillus crispatus 214-1]
 gi|312978355|ref|ZP_07790097.1| cytidine/deoxycytidylate deaminase family protein [Lactobacillus
           crispatus CTV-05]
 gi|227862434|gb|EEJ69949.1| competence protein ComEB family protein [Lactobacillus crispatus
           JV-V01]
 gi|256613422|gb|EEU18625.1| dCMP deaminase [Lactobacillus crispatus 125-2-CHN]
 gi|256714028|gb|EEU29016.1| dCMP deaminase [Lactobacillus crispatus MV-1A-US]
 gi|290921949|gb|EFD98956.1| putative ComE operon protein 2 [Lactobacillus crispatus 214-1]
 gi|310894698|gb|EFQ43770.1| cytidine/deoxycytidylate deaminase family protein [Lactobacillus
           crispatus CTV-05]
          Length = 159

 Score = 68.8 bits (168), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 30/111 (27%), Positives = 47/111 (42%), Gaps = 18/111 (16%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELK----DV---------- 50
             FM  AL  AQ +     + VG+V V NN+II    N +   +    DV          
Sbjct: 9   QYFMMQALVIAQRSTCNRAL-VGSVLVKNNRIIGTGYNGSVSGQPHCDDVGHQMVDGHCV 67

Query: 51  -TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
            T H+E+ AI    +          ++YVT  PC  C  ++  A ++++ Y
Sbjct: 68  RTIHSEMNAIIQCAKFGVST--ENTEIYVTHFPCYNCCKSLLQAGVKKINY 116


>gi|227549213|ref|ZP_03979262.1| diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Corynebacterium lipophiloflavum DSM 44291]
 gi|227078667|gb|EEI16630.1| diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Corynebacterium lipophiloflavum DSM 44291]
          Length = 324

 Score = 68.8 bits (168), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 31/122 (25%), Positives = 41/122 (33%), Gaps = 21/122 (17%)

Query: 15  AQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPE 73
           A   A     PVG        ++I+  G          AHAEI A+R             
Sbjct: 15  AVRGATSPNPPVGCALFSPEGELIATGGTSPAGG----AHAEINALRAAG-----SRARG 65

Query: 74  VDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
               VTLEPC        CA A++ A+I RL Y  ++P                  H  E
Sbjct: 66  ATAVVTLEPCNHTGRTGPCAKALADAQIARLVYLTTDPNPQAAGGADYLAR-----HGVE 120

Query: 128 IY 129
           + 
Sbjct: 121 VV 122


>gi|299753369|ref|XP_001833230.2| diaminohydroxyphosphoribosylamino-pyrimidine deaminase [Coprinopsis
           cinerea okayama7#130]
 gi|298410269|gb|EAU88503.2| diaminohydroxyphosphoribosylamino-pyrimidine deaminase [Coprinopsis
           cinerea okayama7#130]
          Length = 170

 Score = 68.8 bits (168), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 37/135 (27%), Positives = 52/135 (38%), Gaps = 37/135 (27%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIP----VGAVAV----LNNKIISRAGNRNRELKDVTAH 53
               V+M  ALEEA+ A     +P    VG V V      + ++S   +R         H
Sbjct: 5   DDHIVYMKMALEEAEKAV---PVPGAFCVGCVLVARLLHKSVVLSTGYSRELPGN---TH 58

Query: 54  AEILAIRMGCRILSQEI----------------LPEVDLYVTLEPC-------TMCAAAI 90
           AE  A+     I  +E                 L   D+Y TLEPC       + CA A+
Sbjct: 59  AEANALAKVAEISPKEWSALSESYEASSDLSKILECTDVYTTLEPCSIRTSGLSPCADAL 118

Query: 91  SLARIRRLYYGASNP 105
             A++RR   G + P
Sbjct: 119 IKAKVRRCIIGVNEP 133


>gi|257868066|ref|ZP_05647719.1| cytidine/deoxycytidylate deaminase [Enterococcus casseliflavus
           EC30]
 gi|257874396|ref|ZP_05654049.1| cytidine/deoxycytidylate deaminase [Enterococcus casseliflavus
           EC10]
 gi|257876955|ref|ZP_05656608.1| cytidine/deoxycytidylate deaminase [Enterococcus casseliflavus
           EC20]
 gi|257802149|gb|EEV31052.1| cytidine/deoxycytidylate deaminase [Enterococcus casseliflavus
           EC30]
 gi|257808560|gb|EEV37382.1| cytidine/deoxycytidylate deaminase [Enterococcus casseliflavus
           EC10]
 gi|257811121|gb|EEV39941.1| cytidine/deoxycytidylate deaminase [Enterococcus casseliflavus
           EC20]
          Length = 165

 Score = 68.8 bits (168), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 27/113 (23%), Positives = 45/113 (39%), Gaps = 20/113 (17%)

Query: 4   GNVFMSCALEEAQNAA-LRNEIPVGAVAVLNNKIISRAGNRNRE---------------L 47
              FM+ A+  +  +   R E  VGA  V + +II+   N +                  
Sbjct: 9   DQYFMAQAVLLSLRSTCSRLE--VGATLVKDRRIIAGGYNGSVSGDVHCIDDGCYVVDDH 66

Query: 48  KDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
              T HAE+ A+    ++         ++YVT  PC  C  AI  A ++ ++Y
Sbjct: 67  CIRTIHAEMNALLQCAKLGVSTD--NAEIYVTHFPCLPCTKAILQAGVKTIHY 117


>gi|331092051|ref|ZP_08340882.1| hypothetical protein HMPREF9477_01525 [Lachnospiraceae bacterium
           2_1_46FAA]
 gi|330402252|gb|EGG81823.1| hypothetical protein HMPREF9477_01525 [Lachnospiraceae bacterium
           2_1_46FAA]
          Length = 162

 Score = 68.8 bits (168), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 34/123 (27%), Positives = 46/123 (37%), Gaps = 31/123 (25%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVL-NNKIISRAGNR------------N 44
           +     FM  A+     +      P   VG   V  +NKI+S   N              
Sbjct: 9   ISWDEYFMGVAMLSGMRSKD----PSTQVGCCIVSQDNKILSMGYNGLPKGCSDDEFPWT 64

Query: 45  RELKDV-------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRR 97
           RE +D        T H+E+ AI       S   L    LYV+L PC  CA AI  + I+ 
Sbjct: 65  REGEDPLETKYVYTVHSELNAILN----YSGGSLAGAKLYVSLFPCNECAKAIIQSGIKE 120

Query: 98  LYY 100
           + Y
Sbjct: 121 VVY 123


>gi|322374651|ref|ZP_08049165.1| cytidine and deoxycytidylate deaminase family protein
           [Streptococcus sp. C300]
 gi|321280151|gb|EFX57190.1| cytidine and deoxycytidylate deaminase family protein
           [Streptococcus sp. C300]
          Length = 155

 Score = 68.8 bits (168), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 32/117 (27%), Positives = 40/117 (34%), Gaps = 29/117 (24%)

Query: 4   GNVFMSCALEEA-----QNAALRNEIPVGAVAVLNNKIISRAGN--------------RN 44
              F + AL  A     + A       VGAV V +NK+IS   N                
Sbjct: 9   DEYFAAQALLIANRSTCKRAK------VGAVLVKDNKVISTGYNGSVSGTEHCIDHECLV 62

Query: 45  RELKDV-TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
            E   V T HAE+ AI  G              YVT  PC  C   +     +R+ Y
Sbjct: 63  IEGHCVRTLHAEVNAILQGAERGVP---RGFTAYVTHFPCLNCTKQLLQVGCKRVVY 116


>gi|258623229|ref|ZP_05718238.1| deoxycytidylate deaminase, putative [Vibrio mimicus VM573]
 gi|258627669|ref|ZP_05722443.1| deoxycytidylate deaminase, putative [Vibrio mimicus VM603]
 gi|262173485|ref|ZP_06041162.1| deoxycytidylate deaminase [Vibrio mimicus MB-451]
 gi|262403414|ref|ZP_06079972.1| deoxycytidylate deaminase [Vibrio sp. RC586]
 gi|258580040|gb|EEW05015.1| deoxycytidylate deaminase, putative [Vibrio mimicus VM603]
 gi|258584527|gb|EEW09267.1| deoxycytidylate deaminase, putative [Vibrio mimicus VM573]
 gi|261890843|gb|EEY36830.1| deoxycytidylate deaminase [Vibrio mimicus MB-451]
 gi|262349918|gb|EEY99053.1| deoxycytidylate deaminase [Vibrio sp. RC586]
          Length = 160

 Score = 68.8 bits (168), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 28/87 (32%), Positives = 37/87 (42%), Gaps = 18/87 (20%)

Query: 26  VGAVAVLNNKIISRAGN---------RNRELKDV----TAHAEILAIRMGCRILSQEILP 72
           VGAV    N+I+S   N          + + +D+    T HAE  AI    R      L 
Sbjct: 27  VGAVITKQNRIVSVGFNGYPHGISDSASTDDRDMKYLKTLHAEENAILFAKR-----DLD 81

Query: 73  EVDLYVTLEPCTMCAAAISLARIRRLY 99
             ++YVT  PC  CAA I    I  +Y
Sbjct: 82  GCEIYVTHFPCPNCAAKIIQTGIAAVY 108


>gi|229086897|ref|ZP_04219056.1| ComE operon protein 2 [Bacillus cereus Rock3-44]
 gi|228696407|gb|EEL49233.1| ComE operon protein 2 [Bacillus cereus Rock3-44]
          Length = 185

 Score = 68.8 bits (168), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 26/97 (26%), Positives = 41/97 (42%), Gaps = 18/97 (18%)

Query: 26  VGAVAVLNNKIISRAGNRNRELK-----DV----------TAHAEILAIRMGCRILSQEI 70
           VGA  V + +II+   N + +       D           T HAE+ A+    +   +  
Sbjct: 28  VGATIVRDKRIIAGGYNGSIKGGVHCIDDGCYVIDNHCVRTIHAEMNALLQCAKFGVKT- 86

Query: 71  LPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKG 107
             + ++YVT  PC  C  AI  + I  +YY A + K 
Sbjct: 87  -EDAEIYVTHFPCLQCCKAIIQSGITAVYY-ARDYKN 121


>gi|126662522|ref|ZP_01733521.1| putative deoxycytidylate deaminase [Flavobacteria bacterium BAL38]
 gi|126625901|gb|EAZ96590.1| putative deoxycytidylate deaminase [Flavobacteria bacterium BAL38]
          Length = 142

 Score = 68.8 bits (168), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 29/109 (26%), Positives = 44/109 (40%), Gaps = 15/109 (13%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRN--------RELKDVT---- 51
              ++  A E    +  + +  VGA+ V N  IIS   N           +  ++T    
Sbjct: 10  DKAYLRIAKEWGNLSYCQRKK-VGAIIVKNKMIISDGYNGTPSGFENCCEDDANITKWYV 68

Query: 52  AHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
            HAE  AI    R        +  LY+TL PC  C+  I  + I+R+ Y
Sbjct: 69  LHAEANAILKVARSTQS--CEDATLYITLSPCKDCSKLIHQSGIKRVVY 115


>gi|116333998|ref|YP_795525.1| deoxycytidylate deaminase [Lactobacillus brevis ATCC 367]
 gi|116099345|gb|ABJ64494.1| Deoxycytidylate deaminase [Lactobacillus brevis ATCC 367]
          Length = 159

 Score = 68.8 bits (168), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 26/112 (23%), Positives = 41/112 (36%), Gaps = 18/112 (16%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKD-------------- 49
              FM  AL  +  +     + VGA  V + +II+   N +    D              
Sbjct: 9   DQYFMLQALVMSTRSTCNR-LSVGATIVRDKRIIAAGYNGSVSGDDHCLDEGCYLVDGHC 67

Query: 50  -VTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
             T HAE+ A+    +          ++YVT  PC  C   +  A I ++ Y
Sbjct: 68  VRTIHAEMNAVLQCAKFGEATD--GAEIYVTDFPCLQCTKMLLQAGITKITY 117


>gi|295692075|ref|YP_003600685.1| dcmp deaminase [Lactobacillus crispatus ST1]
 gi|295030181|emb|CBL49660.1| dCMP deaminase [Lactobacillus crispatus ST1]
          Length = 159

 Score = 68.8 bits (168), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 30/111 (27%), Positives = 47/111 (42%), Gaps = 18/111 (16%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELK----DV---------- 50
             FM  AL  AQ +     + VG+V V NN+II    N +   +    DV          
Sbjct: 9   QYFMMQALVIAQRSTCNRAL-VGSVLVKNNRIIGTGYNGSVSGQPHCDDVGHQMVDGHCV 67

Query: 51  -TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
            T H+E+ AI    +          ++YVT  PC  C  ++  A ++++ Y
Sbjct: 68  RTIHSEMNAIIQCAKFGVST--ENTEIYVTHFPCYNCCKSLLQAGVKKINY 116


>gi|166033064|ref|ZP_02235893.1| hypothetical protein DORFOR_02786 [Dorea formicigenerans ATCC
           27755]
 gi|166027421|gb|EDR46178.1| hypothetical protein DORFOR_02786 [Dorea formicigenerans ATCC
           27755]
          Length = 162

 Score = 68.8 bits (168), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 35/126 (27%), Positives = 50/126 (39%), Gaps = 31/126 (24%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVL-NNKIISRAGNR------------N 44
           +     FM  A    + + LR++ P   VG   V  +NKI+S   N              
Sbjct: 9   INWDEYFMGVA----KLSGLRSKDPNTQVGCCIVSQDNKILSMGYNGLPKGCSDDEFPWV 64

Query: 45  RELKDV-------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRR 97
           RE +D        T H+E+ AI           L    LYV+L PC  CA AI  + I+ 
Sbjct: 65  REGEDPLKTKYVYTVHSELNAILN----FRGGSLEGAKLYVSLFPCNECAKAIIQSGIKE 120

Query: 98  LYYGAS 103
           + Y  +
Sbjct: 121 VIYDCN 126


>gi|309800001|ref|ZP_07694201.1| ComE operon protein 2 [Streptococcus infantis SK1302]
 gi|308116400|gb|EFO53876.1| ComE operon protein 2 [Streptococcus infantis SK1302]
          Length = 155

 Score = 68.4 bits (167), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 31/117 (26%), Positives = 40/117 (34%), Gaps = 29/117 (24%)

Query: 4   GNVFMSCALEEA-----QNAALRNEIPVGAVAVLNNKIISRAGNRNRE------LKDV-- 50
              F + AL  A     + A       VGAV V +NK+IS   N +          D   
Sbjct: 9   DEYFAAQALLIANRSTCKRAK------VGAVLVKDNKVISTGYNGSVSGTEHCIDHDCLV 62

Query: 51  -------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
                  T HAE+ AI  G      +       YVT  PC  C   +      R+ Y
Sbjct: 63  IEGHCVRTLHAEVNAILQGAERGVPK---GFTAYVTHFPCLNCTKQLLQVGCERVVY 116


>gi|320583405|gb|EFW97618.1| DRAP deaminase, putative [Pichia angusta DL-1]
          Length = 569

 Score = 68.4 bits (167), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 24/84 (28%), Positives = 36/84 (42%), Gaps = 5/84 (5%)

Query: 2   KKGNVFMSCALEEAQNAALRNE-IPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +    +M+ ALE+A+     +    VGAV     ++IS    R  E      HAE  A+ 
Sbjct: 416 ETQKKYMALALEQAEKCPQIDSAFRVGAVITCGGEVISTGHTRELEGN---THAEQCAME 472

Query: 61  MGCRILSQEIL-PEVDLYVTLEPC 83
                     L P  ++Y T+EPC
Sbjct: 473 KYFEKTGSRTLPPGCEIYTTMEPC 496


>gi|255283094|ref|ZP_05347649.1| putative deoxycytidylate deaminase [Bryantella formatexigens DSM
           14469]
 gi|255266396|gb|EET59601.1| putative deoxycytidylate deaminase [Bryantella formatexigens DSM
           14469]
          Length = 160

 Score = 68.4 bits (167), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 35/125 (28%), Positives = 46/125 (36%), Gaps = 30/125 (24%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVL-NNKIISRAGN-------------- 42
           +     FM  A+     +      P   VGA  V  +NKI+S   N              
Sbjct: 8   ISWDEYFMGVAMLSGMRSKD----PNTQVGACIVSSDNKILSMGYNGFPIGCSDDDFPWE 63

Query: 43  RNRELKDV----TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98
           R  E  D     T H+E+ AI           L    LYV+L PC  CA AI  A I+++
Sbjct: 64  REGEALDTKYLYTTHSELNAILN----YRGGSLDGATLYVSLFPCNECAKAIIQAGIKQI 119

Query: 99  YYGAS 103
            Y   
Sbjct: 120 VYDCD 124


>gi|225869190|ref|YP_002745138.1| cytidine and deoxycytidylate deaminase [Streptococcus equi subsp.
           zooepidemicus]
 gi|225869858|ref|YP_002745805.1| cytidine and deoxycytidylate deaminase [Streptococcus equi subsp.
           equi 4047]
 gi|225699262|emb|CAW92581.1| putative cytidine and deoxycytidylate deaminase [Streptococcus equi
           subsp. equi 4047]
 gi|225702466|emb|CAX00368.1| putative cytidine and deoxycytidylate deaminase [Streptococcus equi
           subsp. zooepidemicus]
          Length = 153

 Score = 68.4 bits (167), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 25/90 (27%), Positives = 36/90 (40%), Gaps = 17/90 (18%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKD---------------VTAHAEILAIRMGCRILSQEI 70
           VGAV V +N+II+   N      D                T HAE+ A+    +      
Sbjct: 29  VGAVLVKDNRIIATGYNGGVSATDNCNEAGHYMEEGHCIRTVHAEMNALIQCAKEGIST- 87

Query: 71  LPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
               ++YVT  PC  C  A+  A I ++ Y
Sbjct: 88  -AGTEIYVTHFPCINCTKALLQAGICKITY 116


>gi|260900445|ref|ZP_05908840.1| conserved hypothetical protein [Vibrio parahaemolyticus AQ4037]
 gi|308106996|gb|EFO44536.1| conserved hypothetical protein [Vibrio parahaemolyticus AQ4037]
 gi|328470945|gb|EGF41856.1| putative deoxycytidylate deaminase [Vibrio parahaemolyticus 10329]
          Length = 154

 Score = 68.4 bits (167), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 27/86 (31%), Positives = 34/86 (39%), Gaps = 18/86 (20%)

Query: 26  VGAVAVLNNKIISRAGN-------------RNRELKDVTAHAEILAIRMGCRILSQEILP 72
           VGAV    N+I+S   N                     T HAE  AI     + S+  L 
Sbjct: 27  VGAVITKQNRIVSVGFNGYPHGVSDSVDTDERELKYLKTLHAEENAI-----LFSKRDLD 81

Query: 73  EVDLYVTLEPCTMCAAAISLARIRRL 98
             D++VT  PC  CAA I    I R+
Sbjct: 82  GCDIWVTHFPCPNCAAKIIQTGISRV 107


>gi|300853441|ref|YP_003778425.1| cytidine deaminase [Clostridium ljungdahlii DSM 13528]
 gi|300433556|gb|ADK13323.1| cytidine deaminase [Clostridium ljungdahlii DSM 13528]
          Length = 136

 Score = 68.4 bits (167), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 30/120 (25%), Positives = 41/120 (34%), Gaps = 28/120 (23%)

Query: 1   MKKG--NVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGN------------- 42
           M+K   N F+  A + A+ +      P   VGAV V N +I     N             
Sbjct: 1   MRKDWDNYFIDIAFKVAERSTC----PRLHVGAVLVKNRRIKGTGYNGSPRGLEHCEDVG 56

Query: 43  --RNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
                     T HAE+  +         +      LYVT  PC  C   I    I+R+ Y
Sbjct: 57  CYMKNNHCVRTIHAEVNCLLEVA----PDDRESSTLYVTHMPCPECQKLIITCGIKRVVY 112


>gi|62858897|ref|NP_001016265.1| dCMP deaminase [Xenopus (Silurana) tropicalis]
 gi|89266721|emb|CAJ83844.1| deoxycytidylate deaminase [Xenopus (Silurana) tropicalis]
          Length = 190

 Score = 68.4 bits (167), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 31/116 (26%), Positives = 42/116 (36%), Gaps = 25/116 (21%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGN-RNRELKD------VTA---- 52
             FM+ A   AQ +   N   VGA  V   NKI+    N       D       TA    
Sbjct: 28  EYFMAVAFLAAQRSKDPNSQ-VGACIVNSENKIVGIGYNGMPNGCHDDVLPWARTAEDRL 86

Query: 53  --------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
                   HAE+ AI       +   +    +YV L PC  CA  +  A I+ + +
Sbjct: 87  DTKYPYVCHAELNAIMN----KNTADVKGCTMYVALFPCNECAKLVIQAGIKEVIF 138


>gi|254568330|ref|XP_002491275.1| Subunit of tRNA-specific adenosine-34 deaminase [Pichia pastoris
           GS115]
 gi|238031072|emb|CAY68995.1| Subunit of tRNA-specific adenosine-34 deaminase [Pichia pastoris
           GS115]
 gi|328352208|emb|CCA38607.1| hypothetical protein PP7435_Chr2-0926 [Pichia pastoris CBS 7435]
          Length = 305

 Score = 68.4 bits (167), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 24/85 (28%), Positives = 38/85 (44%), Gaps = 9/85 (10%)

Query: 53  HAEILAIRMGCRILSQ----EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGG 108
           H+ +LAIR   ++        +L +  +Y T EPC MC  A+  +RI RL +   +   G
Sbjct: 204 HSTMLAIRDVAKLQQNDPKSYLLLDCVIYTTHEPCPMCCMALLHSRIERLVF-LKDMTTG 262

Query: 109 GI----ENGTQFYTLATCHHSPEIY 129
           G+      G    T  T +   + Y
Sbjct: 263 GLKFHEGYGYGIQTACTLNWKFDAY 287


>gi|332295432|ref|YP_004437355.1| dCMP deaminase [Thermodesulfobium narugense DSM 14796]
 gi|332178535|gb|AEE14224.1| dCMP deaminase [Thermodesulfobium narugense DSM 14796]
          Length = 152

 Score = 68.4 bits (167), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 30/120 (25%), Positives = 41/120 (34%), Gaps = 26/120 (21%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGN--------------RNRELKD 49
            + FM  A   A  +       VGAV V   +I+S   N                 +L  
Sbjct: 6   DSYFMKIAFLVATRSTCIRRK-VGAVIVKEKRILSTGYNGAPSGLLHCLDIGCLRDKLNI 64

Query: 50  VTA---------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
            +          HAE  AI  G        L    +YVT +PC  CA  +  A I ++ Y
Sbjct: 65  PSGERQELCRGLHAEQNAIIQGAMYGVS--LMGSTIYVTNQPCITCAKMLIQAGIVKIVY 122


>gi|253752314|ref|YP_003025455.1| cytidine and deoxycytidylate deaminase [Streptococcus suis SC84]
 gi|253754140|ref|YP_003027281.1| cytidine and deoxycytidylate deaminase [Streptococcus suis P1/7]
 gi|253756074|ref|YP_003029214.1| cytidine and deoxycytidylate deaminase [Streptococcus suis BM407]
 gi|251816603|emb|CAZ52241.1| putative cytidine and deoxycytidylate deaminase [Streptococcus suis
           SC84]
 gi|251818538|emb|CAZ56369.1| putative cytidine and deoxycytidylate deaminase [Streptococcus suis
           BM407]
 gi|251820386|emb|CAR46982.1| putative cytidine and deoxycytidylate deaminase [Streptococcus suis
           P1/7]
 gi|319758710|gb|ADV70652.1| putative cytidine and deoxycytidylate deaminase [Streptococcus suis
           JS14]
          Length = 155

 Score = 68.4 bits (167), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 29/112 (25%), Positives = 41/112 (36%), Gaps = 19/112 (16%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRE---------------LK 48
              F + AL  A  A  +    VGAV V +NK+I+   N +                   
Sbjct: 9   DEYFAAQALLIANRATCKRAK-VGAVLVKDNKVIATGYNGSVSGTEHCLDQECLMIDGHC 67

Query: 49  DVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
             T HAE+ AI  G      +       YVT  PC  C+  +     +R+ Y
Sbjct: 68  ARTLHAEVNAILQGAERGIPK---GFTAYVTHFPCLNCSKQLLQVGCKRVVY 116


>gi|149013222|ref|ZP_01834008.1| transcriptional regulator, TetR family protein [Streptococcus
           pneumoniae SP19-BS75]
 gi|147762973|gb|EDK69918.1| transcriptional regulator, TetR family protein [Streptococcus
           pneumoniae SP19-BS75]
          Length = 346

 Score = 68.4 bits (167), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 31/117 (26%), Positives = 41/117 (35%), Gaps = 29/117 (24%)

Query: 4   GNVFMSCALEEA-----QNAALRNEIPVGAVAVLNNKIISRAGN--------------RN 44
              F + AL  A     + A       VGA+ V +NK+IS   N                
Sbjct: 200 DEYFAAQALLIANRSTCKRAK------VGAILVKDNKVISTGYNGSVSGTEHCIDHECLV 253

Query: 45  RELKDV-TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
            E   V T HAE+ AI  G      +       YVT  PC  C   +     +R+ Y
Sbjct: 254 IEGHCVRTLHAEVNAILQGAERGVPK---GFTAYVTHFPCLNCTKQLLQVGCKRVVY 307


>gi|110638611|ref|YP_678820.1| cytidine/deoxycytidylate deaminase [Cytophaga hutchinsonii ATCC
           33406]
 gi|110281292|gb|ABG59478.1| cytidine/deoxycytidylate deaminase (dCMP deaminase) [Cytophaga
           hutchinsonii ATCC 33406]
          Length = 159

 Score = 68.4 bits (167), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 25/117 (21%), Positives = 45/117 (38%), Gaps = 23/117 (19%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRN-RELKDV------------ 50
            +++M  A+  A+ +       VGAV   + +IIS   N    +  +             
Sbjct: 8   DDIYMELAVNLAKRSHCIKRH-VGAVLTKDTRIISIGYNGPPEKTHNCDEEWPEEGCPRD 66

Query: 51  -------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
                    HAE  AI     + +   +    +YVTL PC  CA  +  + ++++ Y
Sbjct: 67  SKGSCSLALHAEENAILFA--VKNGTEVKGATIYVTLSPCISCARLLFASGVKKVIY 121


>gi|325860320|ref|ZP_08173442.1| putative dCMP deaminase [Prevotella denticola CRIS 18C-A]
 gi|325482199|gb|EGC85210.1| putative dCMP deaminase [Prevotella denticola CRIS 18C-A]
          Length = 170

 Score = 68.4 bits (167), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 32/110 (29%), Positives = 40/110 (36%), Gaps = 15/110 (13%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRE------------LKDVT 51
              ++  A   A+N+  +    VGA+ V N  IIS   N                 K   
Sbjct: 25  DYRYLRMAHIWAENSYCKR-RQVGALVVKNKMIISDGYNGTPSGFENVCEDEAGVTKSYV 83

Query: 52  AHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
            HAE  AI    R  +        LYVT  PC  CA  I  A I R+ Y 
Sbjct: 84  LHAEANAITKLARSGNNS--EGSTLYVTASPCIECAKLIIQAGISRVVYA 131


>gi|306829176|ref|ZP_07462366.1| cytidine and deoxycytidylate deaminase [Streptococcus mitis ATCC
           6249]
 gi|304428262|gb|EFM31352.1| cytidine and deoxycytidylate deaminase [Streptococcus mitis ATCC
           6249]
          Length = 155

 Score = 68.4 bits (167), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 32/117 (27%), Positives = 40/117 (34%), Gaps = 29/117 (24%)

Query: 4   GNVFMSCALEEA-----QNAALRNEIPVGAVAVLNNKIISRAGN--------------RN 44
              F + AL  A     + A       VGAV V +NK+IS   N                
Sbjct: 9   DEYFAAQALLIANRSTCKRAK------VGAVLVKDNKVISTGYNGSVSGTEHCIDHECLV 62

Query: 45  RELKDV-TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
            E   V T HAE+ AI  G              YVT  PC  C   +     +R+ Y
Sbjct: 63  IEGHCVRTLHAEVNAILQGAERGVP---RGFTAYVTHFPCLNCTKQLLQVGCKRVVY 116


>gi|157874070|ref|XP_001685530.1| hypothetical protein [Leishmania major strain Friedlin]
 gi|68128602|emb|CAJ08734.1| conserved hypothetical protein [Leishmania major strain Friedlin]
          Length = 542

 Score = 68.4 bits (167), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 21/69 (30%), Positives = 37/69 (53%), Gaps = 3/69 (4%)

Query: 72  PEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPG 131
             +DLYVT EPC MCA A+  +RI+R+++   N   GG+      +++A+ +H    Y  
Sbjct: 473 NGLDLYVTHEPCVMCAMALVHSRIQRVFFLFRNAVHGGLGGRYHLHSMASLNHHFSAYEC 532

Query: 132 ISEQRSRQI 140
                + ++
Sbjct: 533 ---TEAAEL 538


>gi|171677037|ref|XP_001903470.1| hypothetical protein [Podospora anserina S mat+]
 gi|170936586|emb|CAP61245.1| unnamed protein product [Podospora anserina S mat+]
          Length = 216

 Score = 68.4 bits (167), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 33/142 (23%), Positives = 53/142 (37%), Gaps = 26/142 (18%)

Query: 26  VGAVAV------LNNKIISRAGNRNRELKDVTAHAEILAIRM--------GCRILSQEIL 71
            G+V V          +I    N+N    + T H E+ AI             +   E L
Sbjct: 45  FGSVIVNHTTGNPQGTLICTGANQNSRTGNPTLHGEMAAISNCSSLFVSSAYNMTPAESL 104

Query: 72  P---EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPK-----GGGIENGTQFYTLATCH 123
               ++ LY   E C MCAAA+  A +R   YG S  +      G +  G++    +   
Sbjct: 105 AAFKQLTLYTNAESCPMCAAAVRWAGLREYIYGVSIKELIELGWGQLGIGSEEVIGSGVG 164

Query: 124 HS---PEIY-PGISEQRSRQII 141
                PE+   G+  + S++  
Sbjct: 165 MRDKDPEVVLGGVGREESKRQF 186


>gi|149742700|ref|XP_001492380.1| PREDICTED: dCMP deaminase [Equus caballus]
          Length = 178

 Score = 68.4 bits (167), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 32/116 (27%), Positives = 42/116 (36%), Gaps = 25/116 (21%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGN-RNRELKD------VTA---- 52
             FM+ A   AQ +   N   VGA  V   NKI+    N       D       TA    
Sbjct: 17  EYFMAVAFLSAQRSKDPNSQ-VGACIVNAENKIVGIGYNGMPNGCSDDLLPWRRTAENKL 75

Query: 53  --------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
                   HAE+ AI       +   +    +YV L PC  CA  I  A I+ + +
Sbjct: 76  DTKYPYVCHAELNAIMN----KNSADVKGCTMYVALFPCNECAKLIIQAGIKEVIF 127


>gi|309359910|emb|CAP32039.2| hypothetical protein CBG_13218 [Caenorhabditis briggsae AF16]
          Length = 293

 Score = 68.4 bits (167), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 26/104 (25%), Positives = 49/104 (47%), Gaps = 5/104 (4%)

Query: 27  GAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEIL-PEVDLYVTLEPCTM 85
           G ++V N+ ++S              HA +  +    +    + L    D+++  EPC M
Sbjct: 167 GCISVQNDILLSSGS----PSTHPLGHAVMEMVGNLQKRTGSDYLGTGADVFLLNEPCAM 222

Query: 86  CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIY 129
           C+ A+   RI+RL+Y  S+  G   ++G Q +   + +H  E+Y
Sbjct: 223 CSMALVHFRIKRLFYVISSRNGVLKDDGWQLHLEPSINHHYEVY 266


>gi|294784089|ref|ZP_06749390.1| deoxycytidylate deaminase [Fusobacterium sp. 3_1_27]
 gi|294488159|gb|EFG35504.1| deoxycytidylate deaminase [Fusobacterium sp. 3_1_27]
          Length = 161

 Score = 68.4 bits (167), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 29/122 (23%), Positives = 45/122 (36%), Gaps = 31/122 (25%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNK-IISRAGNRNRELKD------- 49
           +   + FM  A+  +  +      P   VGA  V  +K I+    N   +  D       
Sbjct: 6   INWDSYFMGIAILSSMRSKD----PNTQVGACIVNEDKRIVGVGYNGLPKGCDDKEFPWE 61

Query: 50  ----------V-TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98
                         HAE+ AI     + S + L +  +YV L PC  C  AI  + I+ +
Sbjct: 62  RDGEFLNTKYPYVCHAELNAI-----LNSIKSLKDCTIYVALFPCHECTKAIIQSGIKEI 116

Query: 99  YY 100
            Y
Sbjct: 117 VY 118


>gi|34762517|ref|ZP_00143514.1| Deoxycytidylate deaminase [Fusobacterium nucleatum subsp. vincentii
           ATCC 49256]
 gi|237741327|ref|ZP_04571808.1| deoxycytidylate deaminase [Fusobacterium sp. 4_1_13]
 gi|256846472|ref|ZP_05551929.1| ComE operon protein 2 [Fusobacterium sp. 3_1_36A2]
 gi|27887795|gb|EAA24866.1| Deoxycytidylate deaminase [Fusobacterium nucleatum subsp. vincentii
           ATCC 49256]
 gi|229430859|gb|EEO41071.1| deoxycytidylate deaminase [Fusobacterium sp. 4_1_13]
 gi|256718241|gb|EEU31797.1| ComE operon protein 2 [Fusobacterium sp. 3_1_36A2]
          Length = 161

 Score = 68.4 bits (167), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 29/122 (23%), Positives = 45/122 (36%), Gaps = 31/122 (25%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNK-IISRAGNRNRELKD------- 49
           +   + FM  A+  +  +      P   VGA  V  +K I+    N   +  D       
Sbjct: 6   INWDSYFMGIAILSSMRSKD----PNTQVGACIVNEDKRIVGVGYNGLPKGCDDKEFPWE 61

Query: 50  ----------V-TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98
                         HAE+ AI     + S + L +  +YV L PC  C  AI  + I+ +
Sbjct: 62  RDGEFLNTKYPYVCHAELNAI-----LNSIKSLKDCTIYVALFPCHECTKAIIQSGIKEI 116

Query: 99  YY 100
            Y
Sbjct: 117 VY 118


>gi|325680467|ref|ZP_08160016.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Ruminococcus albus 8]
 gi|324107836|gb|EGC02103.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Ruminococcus albus 8]
          Length = 159

 Score = 68.4 bits (167), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 35/135 (25%), Positives = 48/135 (35%), Gaps = 32/135 (23%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLN-NKIISRAGNR----NRELKDV-- 50
           +     FM  A   A+ +      P   VGA  V   NKI+S   N       +      
Sbjct: 7   LSWDEYFMGIAHLSARRSKD----PNTQVGACIVSEENKILSVGYNGMPTGCNDDDMPWD 62

Query: 51  ------------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98
                         HAE+ AI       S   L    +YV+L PC  CA AI  + I+ +
Sbjct: 63  REGEFLETKYPFVCHAELNAILN----RSTGSLKNAKIYVSLFPCNECAKAIIQSGIKEV 118

Query: 99  YYGASNPKGGGIENG 113
            YG  + K    +N 
Sbjct: 119 IYG--DDKYADTDNV 131


>gi|196012527|ref|XP_002116126.1| hypothetical protein TRIADDRAFT_50803 [Trichoplax adhaerens]
 gi|190581449|gb|EDV21526.1| hypothetical protein TRIADDRAFT_50803 [Trichoplax adhaerens]
          Length = 157

 Score = 68.4 bits (167), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 30/123 (24%), Positives = 43/123 (34%), Gaps = 31/123 (25%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAV-LNNKIISRAGNRN------------ 44
           +     FM+ A   +Q +      P   VGA  V   NKI+    N              
Sbjct: 17  ISWEEYFMAVAFLSSQRSKD----PNTQVGACIVNQENKIVGIGYNGMPNGCNDDALPWA 72

Query: 45  RELKDVTA-------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRR 97
           RE  +          HAE+ AI       +   L    +YV L PC  CA  I  + I+ 
Sbjct: 73  REASNALDTKYPYVCHAEMNAILN----KNSFDLKGCIIYVALFPCNECAKLIIQSGIKE 128

Query: 98  LYY 100
           + +
Sbjct: 129 VVF 131


>gi|270292326|ref|ZP_06198537.1| cytidine and deoxycytidylate deaminase family protein
           [Streptococcus sp. M143]
 gi|270278305|gb|EFA24151.1| cytidine and deoxycytidylate deaminase family protein
           [Streptococcus sp. M143]
          Length = 155

 Score = 68.4 bits (167), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 32/117 (27%), Positives = 41/117 (35%), Gaps = 29/117 (24%)

Query: 4   GNVFMSCALEEA-----QNAALRNEIPVGAVAVLNNKIISRAGN--------------RN 44
              F + AL  A     + A       VGAV V +NK+IS   N                
Sbjct: 9   DEYFAAQALLIANRSTCKRAK------VGAVLVKDNKVISTGYNGSVSGTEHCIDHECLV 62

Query: 45  RELKDV-TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
            E   V T HAE+ AI  G      +       YVT  PC  C   +     +R+ Y
Sbjct: 63  IEGHCVRTLHAEVNAILQGAERGVPK---GFTAYVTHFPCLNCTKQLLQVGCKRVVY 116


>gi|146319276|ref|YP_001198988.1| deoxycytidylate deaminase [Streptococcus suis 05ZYH33]
 gi|146321480|ref|YP_001201191.1| deoxycytidylate deaminase [Streptococcus suis 98HAH33]
 gi|145690082|gb|ABP90588.1| Deoxycytidylate deaminase [Streptococcus suis 05ZYH33]
 gi|145692286|gb|ABP92791.1| Deoxycytidylate deaminase [Streptococcus suis 98HAH33]
 gi|292558909|gb|ADE31910.1| Deoxycytidylate deaminase [Streptococcus suis GZ1]
          Length = 161

 Score = 68.4 bits (167), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 29/112 (25%), Positives = 41/112 (36%), Gaps = 19/112 (16%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRE---------------LK 48
              F + AL  A  A  +    VGAV V +NK+I+   N +                   
Sbjct: 15  DEYFAAQALLIANRATCKRAK-VGAVLVKDNKVIATGYNGSVSGTEHCLDQECLMIDGHC 73

Query: 49  DVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
             T HAE+ AI  G      +       YVT  PC  C+  +     +R+ Y
Sbjct: 74  ARTLHAEVNAILQGAERGIPK---GFTAYVTHFPCLNCSKQLLQVGCKRVVY 122


>gi|315927631|gb|EFV06962.1| riboflavin biosynthesis protein RibD [Campylobacter jejuni subsp.
           jejuni DFVF1099]
          Length = 336

 Score = 68.4 bits (167), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 39/177 (22%), Positives = 64/177 (36%), Gaps = 44/177 (24%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAV-LNNKIIS-RAGNRNRELKDVTAHAE 55
           MK    +M+ AL EA         P   VG + +  N KI++ +A       K   AHAE
Sbjct: 11  MK--EFYMNLALNEAWK-YQFLTYPNPAVGCIILDKNEKILAIKAH-----EKAGLAHAE 62

Query: 56  ILAIRMGCRILSQEI--------------------LPEVDLYVTLEPC------TMCAAA 89
           + AI    + L  EI                      +   +VTLEPC        CA  
Sbjct: 63  LNAIAHAFKSLRPEISLPKEANALHEFICKNHQGVFKDSIAFVTLEPCSHQGKTPPCAKL 122

Query: 90  ISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
            S    ++++    +        G +F          E+   I ++  +++++ F K
Sbjct: 123 FSELGFKKIFISVKDENKIASG-GAEFLKKQG----IEVEFDILKEEGKKLLKPFLK 174


>gi|306825613|ref|ZP_07458952.1| cytidine and deoxycytidylate deaminase [Streptococcus sp. oral
           taxon 071 str. 73H25AP]
 gi|315612824|ref|ZP_07887735.1| cytidine and deoxycytidylate deaminase [Streptococcus sanguinis
           ATCC 49296]
 gi|304431974|gb|EFM34951.1| cytidine and deoxycytidylate deaminase [Streptococcus sp. oral
           taxon 071 str. 73H25AP]
 gi|315314934|gb|EFU62975.1| cytidine and deoxycytidylate deaminase [Streptococcus sanguinis
           ATCC 49296]
          Length = 155

 Score = 68.4 bits (167), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 32/117 (27%), Positives = 40/117 (34%), Gaps = 29/117 (24%)

Query: 4   GNVFMSCALEEA-----QNAALRNEIPVGAVAVLNNKIISRAGN--------------RN 44
              F + AL  A     + A       VGAV V +NK+IS   N                
Sbjct: 9   DEYFAAQALLIANRSTCKRAK------VGAVLVKDNKVISTGYNGSVSGTEHCIDHECLV 62

Query: 45  RELKDV-TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
            E   V T HAE+ AI  G              YVT  PC  C   +     +R+ Y
Sbjct: 63  IEGHCVRTLHAEVNAILQGAERGVP---RGFTAYVTHFPCLNCTKQLLQVGCKRVVY 116


>gi|294660212|ref|NP_852829.2| bifunctional dihydrofolate reductase/deoxycytidylate deaminase
           [Mycoplasma gallisepticum str. R(low)]
 gi|5565934|gb|AAD45277.1|AF152114_5 dihydrofolate reductase/deoxycytidylate deaminase fusion protein
           [Mycoplasma gallisepticum]
 gi|284811862|gb|AAP56397.2| Bifunctional protein including dihydrofolate reductase and
           deoxycytidylate deaminase family domains [Mycoplasma
           gallisepticum str. R(low)]
 gi|284930290|gb|ADC30229.1| Bifunctional protein including dihydrofolate reductase and
           deoxycytidylate deaminase family domains [Mycoplasma
           gallisepticum str. R(high)]
 gi|284931057|gb|ADC30995.1| Bifunctional protein including dihydrofolate reductase and
           deoxycytidylate deaminase family domains [Mycoplasma
           gallisepticum str. F]
          Length = 317

 Score = 68.4 bits (167), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 30/122 (24%), Positives = 42/122 (34%), Gaps = 31/122 (25%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNK-IISRAGN-------------R 43
           +     FM  A   A  +      P   VGA  V   K +I    N             R
Sbjct: 166 ISWDEYFMMLANVSAMRSKD----PSTQVGACIVNKKKYVIGLGYNGMPKGLDNIFPWDR 221

Query: 44  NRELKDVTA-----HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98
             +    T      HAEI AI     + +  ++ +  LY  L PC+ CA  I  + I  +
Sbjct: 222 TNQDSAKTKYPYVVHAEINAI-----LNTSTVIEDCTLYTNLFPCSNCAKTIVQSGIVEV 276

Query: 99  YY 100
            Y
Sbjct: 277 VY 278


>gi|124513702|ref|XP_001350207.1| cytidine and deoxycytidylate deaminase, putative [Plasmodium
           falciparum 3D7]
 gi|23615624|emb|CAD52616.1| cytidine and deoxycytidylate deaminase, putative [Plasmodium
           falciparum 3D7]
          Length = 232

 Score = 68.4 bits (167), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 19/84 (22%), Positives = 33/84 (39%), Gaps = 12/84 (14%)

Query: 70  ILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT--LATCHHSPE 127
            L +  + VT EPC MC  A+ L  I+ +Y+   N + GG  +    +        H  E
Sbjct: 140 NLKKCCIVVTCEPCIMCVYALKLIGIKNIYFCCLNERFGGCGSVLSLHKKYEDINVHYIE 199

Query: 128 IYPGISEQRSRQ----IIQDFFKE 147
                      +    +++ F+K 
Sbjct: 200 ------HPECSEKSINLMKAFYKA 217



 Score = 51.8 bits (124), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 18/58 (31%), Positives = 33/58 (56%), Gaps = 3/58 (5%)

Query: 7  FMSCALEEAQNAALRN--EIPVGAVAVLNNK-IISRAGNRNRELKDVTAHAEILAIRM 61
          F++ AL EA+ +  +   E+P+  + +   K IIS + N   E K+ + H+E++AI  
Sbjct: 12 FLNIALGEAEKSLQKELKEMPIFCLLINEEKKIISSSYNYTNESKNGSRHSELIAIDK 69


>gi|307202968|gb|EFN82184.1| Deoxycytidylate deaminase [Harpegnathos saltator]
          Length = 181

 Score = 68.4 bits (167), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 31/120 (25%), Positives = 42/120 (35%), Gaps = 31/120 (25%)

Query: 4   GNVFMSCALEEAQNAALRNEIP---VGAVAVL-NNKIISRAGNR---------------N 44
              FM+ A   AQ +      P   VGA  V  +NKII    N                +
Sbjct: 16  DEYFMAVAFLSAQRSKD----PYTQVGACIVNNDNKIIGIGYNGMPIGCSDDVFPWNKGS 71

Query: 45  RELKDV----TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
               D       HAE+ A+       +     +  +YV L PC  CA  I  + IR + Y
Sbjct: 72  YSSLDSKYLYVCHAEVNAVLN----KNSSDCKDCTIYVALFPCNECAKVIIQSGIRTVIY 127


>gi|149039572|gb|EDL93734.1| deaminase domain containing 1 (predicted) [Rattus norvegicus]
          Length = 91

 Score = 68.4 bits (167), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 13/50 (26%), Positives = 26/50 (52%)

Query: 2  KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVT 51
          ++   +M  A+  A+ A    E+PVG + V NN+++ +  N   + K+  
Sbjct: 20 QETEKWMEEAMRMAKEALENIEVPVGCLMVYNNEVVGKGRNEVNQTKNCI 69


>gi|223933157|ref|ZP_03625149.1| CMP/dCMP deaminase zinc-binding [Streptococcus suis 89/1591]
 gi|223898218|gb|EEF64587.1| CMP/dCMP deaminase zinc-binding [Streptococcus suis 89/1591]
          Length = 155

 Score = 68.4 bits (167), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 29/112 (25%), Positives = 41/112 (36%), Gaps = 19/112 (16%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRE---------------LK 48
              F + AL  A  A  +    VGAV V +NK+I+   N +                   
Sbjct: 9   DEYFAAQALLIANRATCKRAK-VGAVLVKDNKVIATGYNGSVSGTEHCLDQECLMVDGHC 67

Query: 49  DVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
             T HAE+ AI  G      +       YVT  PC  C+  +     +R+ Y
Sbjct: 68  ARTLHAEVNAILQGAERGIPK---GFTAYVTHFPCLNCSKQLLQVGCKRVVY 116


>gi|331028070|ref|YP_004421784.1| deoxycytidylate deaminase [Roseobacter phage RDJL Phi 1]
 gi|301341533|gb|ADK73417.1| deoxycytidylate deaminase [Roseobacter phage RDJL Phi 1]
          Length = 154

 Score = 68.0 bits (166), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 30/119 (25%), Positives = 38/119 (31%), Gaps = 33/119 (27%)

Query: 2   KKGNVFMSCALEEAQ---NAALRNEIPVGAVAVLNNKIISRAGNRNRE--------LKDV 50
           K    FM  A  EA+            VGA  V  +    R  +              D 
Sbjct: 8   KWDKRFMRLAC-EARTWVKGPDLG---VGACVVSPDN---RGFSLGYSGLPRGMKDTNDR 60

Query: 51  TA----------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLY 99
                       HAE+ AI    R +         LY T  PC+ CA AI  A I+R+ 
Sbjct: 61  ITETEFKDHHMVHAELNAILNASRSVVGW-----TLYATTHPCSHCAGAIIQAGIKRVV 114


>gi|304317923|ref|YP_003853068.1| CMP/dCMP deaminase zinc-binding [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
 gi|302779425|gb|ADL69984.1| CMP/dCMP deaminase zinc-binding [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
          Length = 147

 Score = 68.0 bits (166), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 30/99 (30%), Positives = 38/99 (38%), Gaps = 27/99 (27%)

Query: 26  VGAVAVLNNKIISRAGN------------------------RNRELKDVTAHAEILAIRM 61
           VGAV V +  IIS   N                           EL   T HAE  AI  
Sbjct: 27  VGAVIVKDKHIISTGYNGAPTGLKHCEEVGCMRENLNIPSGERHELCRGT-HAEQNAIIQ 85

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
               L+     +  +YV+  PC+MCA  I  A I+R+ Y
Sbjct: 86  AA--LNGVSTKDATIYVSASPCSMCAKMIINAGIKRVVY 122


>gi|151940847|gb|EDN59229.1| tRNA-specific adenosine deaminase subunit [Saccharomyces cerevisiae
           YJM789]
 gi|190405371|gb|EDV08638.1| tRNA-specific adenosine deaminase 3 [Saccharomyces cerevisiae
           RM11-1a]
 gi|259148298|emb|CAY81545.1| Tad3p [Saccharomyces cerevisiae EC1118]
          Length = 322

 Score = 68.0 bits (166), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 26/125 (20%), Positives = 53/125 (42%), Gaps = 19/125 (15%)

Query: 28  AVAV----LNNKIISR-AGNRNRELKDVTAHAEILAIRMGCRIL--------SQEILPEV 74
           +V V      +K+++    N    L     H+ ++ IR     L        +  +  + 
Sbjct: 188 SVFVDPSRKKDKVVAEDGRNCENSL--PIDHSVMVGIRAVGERLREGVDEDANSYLCLDY 245

Query: 75  DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI----ENGTQFYTLATCHHSPEIYP 130
           D+Y+T EPC+MC+ A+  +R+RR+ +     + G +     +G         + + E + 
Sbjct: 246 DVYLTHEPCSMCSMALIHSRVRRVVFLTEMQRTGSLKLTSGDGYCMNDNKQLNSTYEAFQ 305

Query: 131 GISEQ 135
            I E+
Sbjct: 306 WIGEE 310


>gi|90961656|ref|YP_535572.1| ComE operon protein 2 [Lactobacillus salivarius UCC118]
 gi|90820850|gb|ABD99489.1| ComE operon protein 2 [Lactobacillus salivarius UCC118]
 gi|300214461|gb|ADJ78877.1| ComE operon protein 2 [Lactobacillus salivarius CECT 5713]
          Length = 158

 Score = 68.0 bits (166), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 25/112 (22%), Positives = 44/112 (39%), Gaps = 18/112 (16%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKD-------------- 49
              FM  A+  +  +     + VGA+ V + ++I+   N      D              
Sbjct: 9   NQYFMLQAVLLSLRSTCER-LSVGAILVRDKRVIAGGYNGAVSGDDHCIDVGCYVVDGHC 67

Query: 50  -VTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
             T HAE+ A+    +          ++YVT  PC  C  ++  A I+++YY
Sbjct: 68  LRTIHAEMNAVLQCSKFGIPTD--GAEIYVTDFPCLQCTKSLLQAGIKKIYY 117


>gi|9755339|ref|NP_013420.2| Tad3p [Saccharomyces cerevisiae S288c]
 gi|23822264|sp|Q9URQ3|TAD3_YEAST RecName: Full=tRNA-specific adenosine deaminase subunit TAD3;
           AltName: Full=tRNA-specific adenosine-34 deaminase
           subunit TAD3
 gi|6434059|emb|CAB60630.1| tRNA-specific adenosine-34 deaminase subunit Tad3p/ADAT3
           [Saccharomyces cerevisiae]
 gi|285813730|tpg|DAA09626.1| TPA: Tad3p [Saccharomyces cerevisiae S288c]
          Length = 322

 Score = 68.0 bits (166), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 26/125 (20%), Positives = 53/125 (42%), Gaps = 19/125 (15%)

Query: 28  AVAV----LNNKIISR-AGNRNRELKDVTAHAEILAIRMGCRIL--------SQEILPEV 74
           +V V      +K+++    N    L     H+ ++ IR     L        +  +  + 
Sbjct: 188 SVFVDPSRKKDKVVAEDGRNCENSL--PIDHSVMVGIRAVGERLREGVDEDANSYLCLDY 245

Query: 75  DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI----ENGTQFYTLATCHHSPEIYP 130
           D+Y+T EPC+MC+ A+  +R+RR+ +     + G +     +G         + + E + 
Sbjct: 246 DVYLTHEPCSMCSMALIHSRVRRVVFLTEMQRTGSLKLTSGDGYCMNDNKQLNSTYEAFQ 305

Query: 131 GISEQ 135
            I E+
Sbjct: 306 WIGEE 310


>gi|1078080|pir||S53395 hypothetical protein YLR316c - yeast (Saccharomyces cerevisiae)
          Length = 299

 Score = 68.0 bits (166), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 26/125 (20%), Positives = 53/125 (42%), Gaps = 19/125 (15%)

Query: 28  AVAV----LNNKIISR-AGNRNRELKDVTAHAEILAIRMGCRIL--------SQEILPEV 74
           +V V      +K+++    N    L     H+ ++ IR     L        +  +  + 
Sbjct: 165 SVFVDPSRKKDKVVAEDGRNCENSL--PIDHSVMVGIRAVGERLREGVDEDANSYLCLDY 222

Query: 75  DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI----ENGTQFYTLATCHHSPEIYP 130
           D+Y+T EPC+MC+ A+  +R+RR+ +     + G +     +G         + + E + 
Sbjct: 223 DVYLTHEPCSMCSMALIHSRVRRVVFLTEMQRTGSLKLTSGDGYCMNDNKQLNSTYEAFQ 282

Query: 131 GISEQ 135
            I E+
Sbjct: 283 WIGEE 287


>gi|184155085|ref|YP_001843425.1| competence protein [Lactobacillus fermentum IFO 3956]
 gi|227514789|ref|ZP_03944838.1| competence protein ComEB [Lactobacillus fermentum ATCC 14931]
 gi|260663629|ref|ZP_05864518.1| ComE operon protein 2 [Lactobacillus fermentum 28-3-CHN]
 gi|183226429|dbj|BAG26945.1| competence protein [Lactobacillus fermentum IFO 3956]
 gi|227086837|gb|EEI22149.1| competence protein ComEB [Lactobacillus fermentum ATCC 14931]
 gi|260551855|gb|EEX24970.1| ComE operon protein 2 [Lactobacillus fermentum 28-3-CHN]
          Length = 159

 Score = 68.0 bits (166), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 31/119 (26%), Positives = 45/119 (37%), Gaps = 22/119 (18%)

Query: 1   MKK----GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRE---------- 46
           MKK       FM  A   A  +     + VGAV V + +II    N              
Sbjct: 1   MKKRIDWDQYFMVQAALLASRSTCTR-LSVGAVLVRDKRIIGSGYNGAVAGDEHCIDVGC 59

Query: 47  -LKDV----TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
            L+D     T HAE+ A+    +  +        +YVT  PC  C  ++  A I ++ Y
Sbjct: 60  YLRDGHCVRTIHAEMNALLQCAKFGTSTD--GAMVYVTDFPCLQCTKSLLQAGITQINY 116


>gi|227890744|ref|ZP_04008549.1| competence protein ComEB [Lactobacillus salivarius ATCC 11741]
 gi|301300424|ref|ZP_07206625.1| ComE operon protein 2 [Lactobacillus salivarius ACS-116-V-Col5a]
 gi|227867682|gb|EEJ75103.1| competence protein ComEB [Lactobacillus salivarius ATCC 11741]
 gi|300851967|gb|EFK79650.1| ComE operon protein 2 [Lactobacillus salivarius ACS-116-V-Col5a]
          Length = 162

 Score = 68.0 bits (166), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 25/112 (22%), Positives = 44/112 (39%), Gaps = 18/112 (16%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKD-------------- 49
              FM  A+  +  +     + VGA+ V + ++I+   N      D              
Sbjct: 13  NQYFMLQAVLLSLRSTCER-LSVGAILVRDKRVIAGGYNGAVSGDDHCIDVGCYVVDGHC 71

Query: 50  -VTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
             T HAE+ A+    +          ++YVT  PC  C  ++  A I+++YY
Sbjct: 72  LRTIHAEMNAVLQCSKFGIPTD--GAEIYVTDFPCLQCTKSLLQAGIKKIYY 121


>gi|307565320|ref|ZP_07627813.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Prevotella amnii CRIS 21A-A]
 gi|307345989|gb|EFN91333.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Prevotella amnii CRIS 21A-A]
          Length = 145

 Score = 68.0 bits (166), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 31/107 (28%), Positives = 43/107 (40%), Gaps = 15/107 (14%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRN--------RELKDVT----AHA 54
           ++  A   A+N+  +    VG + V N  IIS   N           +  +VT     HA
Sbjct: 12  YLRMARIWAENSYCQRRK-VGTLVVKNKMIISDGYNGTPSGFENVCEDSNNVTKPYVLHA 70

Query: 55  EILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
           E  AI    R  +        +YVT  PC  CA  I  A I+R+ Y 
Sbjct: 71  EANAITKLARSGNNS--EGATIYVTDAPCIECAKLIIQAGIKRIVYA 115


>gi|281354625|gb|EFB30209.1| hypothetical protein PANDA_001894 [Ailuropoda melanoleuca]
          Length = 182

 Score = 68.0 bits (166), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 32/116 (27%), Positives = 42/116 (36%), Gaps = 25/116 (21%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGN-RNRELKD------VTA---- 52
             FM+ A   AQ +   N   VGA  V   NKI+    N       D       TA    
Sbjct: 22  EYFMAVAFLSAQRSKDPNSQ-VGACIVNAENKIVGIGYNGMPNGCSDDLLPWRRTAESKL 80

Query: 53  --------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
                   HAE+ AI       +   +    +YV L PC  CA  I  A I+ + +
Sbjct: 81  DTKYPYVCHAELNAIMN----KNSADVKGCTMYVALFPCNECAKLIIQAGIKEVIF 132


>gi|308813003|ref|XP_003083808.1| cytidine/deoxycytidylate deaminase family protein (ISS)
           [Ostreococcus tauri]
 gi|116055690|emb|CAL57775.1| cytidine/deoxycytidylate deaminase family protein (ISS)
           [Ostreococcus tauri]
          Length = 290

 Score = 68.0 bits (166), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 34/125 (27%), Positives = 44/125 (35%), Gaps = 33/125 (26%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNK-IISRAGN-------------- 42
           +   + FMS A   AQ +      P   VGA  V  +K I+    N              
Sbjct: 98  LSWDDYFMSVAFLSAQRSKD----PNKQVGACIVGEDKLILGVGYNGFPRGCADSALPWA 153

Query: 43  ------RNRELKDV-TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARI 95
                    E K     HAE+ AI       +   +    LYVT+ PC  CA  I  A I
Sbjct: 154 KKSTNGDELETKYPYVCHAEMNAIMN----KNSASVAGGTLYVTMYPCNECAKLIIQAGI 209

Query: 96  RRLYY 100
           R + Y
Sbjct: 210 REVVY 214


>gi|56963412|ref|YP_175143.1| late competence protein ComEB [Bacillus clausii KSM-K16]
 gi|56909655|dbj|BAD64182.1| late competence protein ComEB [Bacillus clausii KSM-K16]
          Length = 196

 Score = 68.0 bits (166), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 23/91 (25%), Positives = 36/91 (39%), Gaps = 17/91 (18%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKD---------------VTAHAEILAIRMGCRILSQEI 70
           VGA  V + +II+   N +    D                T HAE+ A+    +      
Sbjct: 28  VGATIVRDKRIIAGGYNGSVSGSDHCLDKGCYVVDNHCIRTVHAEVNALLQCAKFGVPT- 86

Query: 71  LPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
               ++Y+T  PC  C  ++  A I R+YY 
Sbjct: 87  -AGAEIYITHFPCIHCTKSLIQAGIARVYYA 116


>gi|154343275|ref|XP_001567583.1| hypothetical protein [Leishmania braziliensis MHOM/BR/75/M2904]
 gi|134064915|emb|CAM43024.1| conserved hypothetical protein [Leishmania braziliensis
           MHOM/BR/75/M2904]
          Length = 539

 Score = 68.0 bits (166), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 20/69 (28%), Positives = 36/69 (52%), Gaps = 3/69 (4%)

Query: 72  PEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPG 131
             +D+YVT EPC MCA A+  +RI+R+++   N   GG+      +++A+ +H    Y  
Sbjct: 470 NGLDMYVTHEPCVMCAMALVHSRIQRVFFLFRNAVHGGLGGRYHVHSIASLNHHFRAYEC 529

Query: 132 ISEQRSRQI 140
                +  +
Sbjct: 530 ---TEAAAL 535


>gi|218961643|ref|YP_001741418.1| cytidine/deoxycytidylate deaminase family protein [Candidatus
           Cloacamonas acidaminovorans]
 gi|167730300|emb|CAO81212.1| cytidine/deoxycytidylate deaminase family protein [Candidatus
           Cloacamonas acidaminovorans]
          Length = 157

 Score = 68.0 bits (166), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 31/127 (24%), Positives = 45/127 (35%), Gaps = 30/127 (23%)

Query: 5   NVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGN--------------RNRELK 48
             FM  A   ++ +    R    VGAV + +N+II+   N                 + K
Sbjct: 8   QYFMEMAYLASKRSTCLRRK---VGAVLIRDNQIIATGYNGSPKGVPHCEDIGCLREQQK 64

Query: 49  DVTA---------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLY 99
             +          HAE  AI       S        LY T +PC++CA  I  A I+ +Y
Sbjct: 65  VPSGKNQELCRGVHAEQNAIIQAAINGSSTR--GAILYCTNQPCSICARLIINAEIKTVY 122

Query: 100 YGASNPK 106
                P 
Sbjct: 123 IAEPYPD 129


>gi|312081040|ref|XP_003142857.1| hypothetical protein LOAG_07276 [Loa loa]
 gi|307761980|gb|EFO21214.1| hypothetical protein LOAG_07276 [Loa loa]
          Length = 269

 Score = 68.0 bits (166), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 19/58 (32%), Positives = 31/58 (53%)

Query: 72  PEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIY 129
              D+Y+T EPC MCA A+   R+ R++YG   P GG  E+  +     + +H   ++
Sbjct: 206 TGFDVYLTDEPCAMCAMALVHFRVGRVFYGKRTPSGGVYESCWRIQEEKSLNHHYAVF 263


>gi|16081448|ref|NP_393792.1| dCMP deaminase [Thermoplasma acidophilum DSM 1728]
 gi|10639455|emb|CAC11457.1| probable dCMP deaminase [Thermoplasma acidophilum]
          Length = 170

 Score = 68.0 bits (166), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 28/134 (20%), Positives = 45/134 (33%), Gaps = 42/134 (31%)

Query: 4   GNVFMSCALEEA-------QNAALRNEIPVGAVAVLNNKIISRAGNR------------- 43
              FM  A   A       +         VGAV V +  +++   N              
Sbjct: 10  DEYFMRMAYLAASRTNCIRRK--------VGAVIVKDRNVLATGYNGPPSGTAHCDVVGC 61

Query: 44  -NRELKDVTA---------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLA 93
              +LK  +          HAE  AI      +    + +  +YVT  PC +C+  I  A
Sbjct: 62  IREDLKVPSGERHELCRGLHAEQNAIIQAA--VHGVSIKDSTIYVTTHPCVVCSKMIMNA 119

Query: 94  RIRRLYY--GASNP 105
           +I+ + Y  G  + 
Sbjct: 120 QIKEIVYAEGYPDE 133


>gi|32455577|ref|NP_862060.1| putative deaminase [Streptomyces lividans]
 gi|28883228|gb|AAO61161.1| putative deaminase [Streptomyces lividans]
 gi|89357155|gb|ABD72321.1| pQC542.17 [Streptomyces lividans]
          Length = 155

 Score = 68.0 bits (166), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 26/113 (23%), Positives = 42/113 (37%), Gaps = 14/113 (12%)

Query: 2   KKGNVFMSCALEEAQNAA-LRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAI 59
            +   ++  A++ A           VGAV V  +   ++   +R     +   HAE +A+
Sbjct: 7   DQDLRWIQRAIDLAALCPPAAGAYSVGAVIVSEDGTELATGYSRATGPHE---HAEEVAL 63

Query: 60  RMGCRILSQEILPEVDLYVTLEPC-------TMCAAAISLARIRRLYYGASNP 105
               +      L    +Y TLEPC       T CA  +  A I R+      P
Sbjct: 64  AQLPQ--DDPRLAGATIYSTLEPCSQRRSPRTPCAQRVLAAGIPRVVIAWREP 114


>gi|154686818|ref|YP_001421979.1| hypothetical protein RBAM_023880 [Bacillus amyloliquefaciens FZB42]
 gi|308174347|ref|YP_003921052.1| DNA transport protein [Bacillus amyloliquefaciens DSM 7]
 gi|154352669|gb|ABS74748.1| ComEB [Bacillus amyloliquefaciens FZB42]
 gi|307607211|emb|CBI43582.1| putative enzyme associated to DNA transport (competence) [Bacillus
           amyloliquefaciens DSM 7]
          Length = 189

 Score = 68.0 bits (166), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 29/125 (23%), Positives = 46/125 (36%), Gaps = 25/125 (20%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRE----------- 46
           +     FM+ +   A  +      P   VGA  V + ++I+   N +             
Sbjct: 4   ISWNQYFMAQSHLLALRSTC----PRLSVGATVVRDKRMIAGGYNGSIAGGVHCADEGCL 59

Query: 47  ----LKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGA 102
                   T HAE+ AI    +          ++YVT  PC  C  +I  A I+ +YY A
Sbjct: 60  LIDNHCQRTIHAEMNAILQCSKFGVPT--EGAEIYVTHYPCIQCCKSIIQAGIKTVYY-A 116

Query: 103 SNPKG 107
            + K 
Sbjct: 117 EDYKT 121


>gi|120609786|ref|YP_969464.1| CMP/dCMP deaminase [Acidovorax citrulli AAC00-1]
 gi|120588250|gb|ABM31690.1| CMP/dCMP deaminase, zinc-binding protein [Acidovorax citrulli
           AAC00-1]
          Length = 119

 Score = 68.0 bits (166), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 24/68 (35%), Positives = 27/68 (39%), Gaps = 5/68 (7%)

Query: 37  ISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIR 96
           ++  GN      D   HAE    R         IL    L  T EPC MCA  I  A I 
Sbjct: 2   LAEQGN-----IDTVNHAESTLAREAAARWPAGILRGCTLVTTFEPCAMCAGTIYWAGIG 56

Query: 97  RLYYGASN 104
           R+ YGA  
Sbjct: 57  RVLYGAEE 64


>gi|328554294|gb|AEB24786.1| enzyme associated to DNA transport (competence) [Bacillus
           amyloliquefaciens TA208]
 gi|328912690|gb|AEB64286.1| ComE operon protein 2 [Bacillus amyloliquefaciens LL3]
          Length = 189

 Score = 68.0 bits (166), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 29/125 (23%), Positives = 46/125 (36%), Gaps = 25/125 (20%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRE----------- 46
           +     FM+ +   A  +      P   VGA  V + ++I+   N +             
Sbjct: 4   ISWNQYFMAQSHLLALRSTC----PRLSVGATVVRDKRMIAGGYNGSIAGGVHCADEGCL 59

Query: 47  ----LKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGA 102
                   T HAE+ AI    +          ++YVT  PC  C  +I  A I+ +YY A
Sbjct: 60  LIDNHCQRTIHAEMNAILQCSKFGVPT--EGAEIYVTHYPCIQCCKSIIQAGIKTVYY-A 116

Query: 103 SNPKG 107
            + K 
Sbjct: 117 EDYKT 121


>gi|313672555|ref|YP_004050666.1| cmp/dcmp deaminase zinc-binding protein [Calditerrivibrio
           nitroreducens DSM 19672]
 gi|312939311|gb|ADR18503.1| CMP/dCMP deaminase zinc-binding protein [Calditerrivibrio
           nitroreducens DSM 19672]
          Length = 149

 Score = 68.0 bits (166), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 23/99 (23%), Positives = 37/99 (37%), Gaps = 27/99 (27%)

Query: 26  VGAVAVLNNKIISRAGN------------------------RNRELKDVTAHAEILAIRM 61
           VGAV V +N+I++   N                        +  EL     HAE  AI  
Sbjct: 27  VGAVIVKDNRILATGYNGVPSKISHCSEKGCLRAKLNVPSGQRHELCRGL-HAEQNAIIQ 85

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
             +  +   +    +Y   +PC++C   I  A I+ + Y
Sbjct: 86  ASKYGTP--IDGSTIYTNAKPCSICTKMIINAGIKEIVY 122


>gi|229495862|ref|ZP_04389588.1| cytidine/deoxycytidylate deaminase family protein [Porphyromonas
           endodontalis ATCC 35406]
 gi|229317175|gb|EEN83082.1| cytidine/deoxycytidylate deaminase family protein [Porphyromonas
           endodontalis ATCC 35406]
          Length = 146

 Score = 68.0 bits (166), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 25/88 (28%), Positives = 36/88 (40%), Gaps = 14/88 (15%)

Query: 26  VGAVAVLNNKIISRAGNRN-----RELKDVTA-------HAEILAIRMGCRILSQEILPE 73
           VGA+ V +  IIS   N          +D +        HAE  AI       +      
Sbjct: 32  VGALIVKDQMIISDGYNGTPSGFENVCEDESGLTKPYVLHAEANAITKVACSGNNSD--G 89

Query: 74  VDLYVTLEPCTMCAAAISLARIRRLYYG 101
             +Y+T  PC  CA  I  ++I+R+ YG
Sbjct: 90  ATIYITASPCVECAKLIIQSKIKRVVYG 117


>gi|296395033|ref|YP_003659917.1| riboflavin biosynthesis protein RibD [Segniliparus rotundus DSM
           44985]
 gi|296182180|gb|ADG99086.1| riboflavin biosynthesis protein RibD [Segniliparus rotundus DSM
           44985]
          Length = 343

 Score = 68.0 bits (166), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 38/158 (24%), Positives = 62/158 (39%), Gaps = 28/158 (17%)

Query: 4   GNVFMSCALEEAQNAALRN--EIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIR 60
              FM  A+  ++ A  R     PVGAV V  + +I+ R   R    +    HAE++A+ 
Sbjct: 9   DEAFMREAIAVSRLARGRTSPNPPVGAVLVSPDGQIVGRGATRPPGQE----HAEVVALA 64

Query: 61  MGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP--KGGGIEN 112
                   E       YVTLEPC        CA A+  A +  +     +P  + GG   
Sbjct: 65  QAG-----ERARGATAYVTLEPCNHVGRTGPCARALVDAGVAAVVCAVPDPNQRSGG--- 116

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQ-IIQDFFKERR 149
           G +    A       +  G+    +R   ++++   +R
Sbjct: 117 GAKTLEAAGVG----VRVGVLAHEARTGPLREWLHAQR 150


>gi|260943139|ref|XP_002615868.1| hypothetical protein CLUG_04750 [Clavispora lusitaniae ATCC 42720]
 gi|238851158|gb|EEQ40622.1| hypothetical protein CLUG_04750 [Clavispora lusitaniae ATCC 42720]
          Length = 315

 Score = 68.0 bits (166), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 28/123 (22%), Positives = 42/123 (34%), Gaps = 30/123 (24%)

Query: 4   GNVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGN---------------RNRE 46
              FM  A + A  A   N  +  VG V V +N++++   N               R  +
Sbjct: 166 DAYFMRLA-DLA--ALRSNCMKRRVGCVIVKDNRVVATGYNGTPRHLTNCNEGGCSRCNQ 222

Query: 47  LKDVTA--------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98
            +   A        HAE  A+    R           LY    PC  C+  I  + IR++
Sbjct: 223 GQGSGAGLSTCLCLHAEENALLEAGRDRIAG--ENSILYCNTCPCLTCSIKIVQSGIRQV 280

Query: 99  YYG 101
            Y 
Sbjct: 281 VYA 283


>gi|296876705|ref|ZP_06900753.1| deoxycytidylate deaminase [Streptococcus parasanguinis ATCC 15912]
 gi|296432207|gb|EFH18006.1| deoxycytidylate deaminase [Streptococcus parasanguinis ATCC 15912]
          Length = 160

 Score = 68.0 bits (166), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 29/112 (25%), Positives = 40/112 (35%), Gaps = 19/112 (16%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKD-------------- 49
              F + AL  +  A       VGAV V +NK+I+   N +    D              
Sbjct: 14  DEYFAAQALLISNRATCNRAK-VGAVLVKDNKVIATGYNGSVSGTDHCLEDGCLMVEGHC 72

Query: 50  -VTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
             T HAE+ AI  G      +       YVT  PC  C   +     +R+ Y
Sbjct: 73  VRTIHAEVNAILQGAERGIPK---GFTAYVTHFPCLNCTKQLLQVGCKRVVY 121


>gi|30022404|ref|NP_834035.1| ComE operon protein 2 [Bacillus cereus ATCC 14579]
 gi|29897962|gb|AAP11236.1| ComE operon protein 2 [Bacillus cereus ATCC 14579]
          Length = 182

 Score = 68.0 bits (166), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 25/91 (27%), Positives = 39/91 (42%), Gaps = 17/91 (18%)

Query: 26  VGAVAVLNNKIISRAGNRNRELK-----DV----------TAHAEILAIRMGCRILSQEI 70
           VGA  V + +II+   N + +       D           T HAE+ A+    +  ++  
Sbjct: 28  VGATIVRDKRIIAGGYNGSIKGGVHCIDDGCYVIDNHCVRTIHAEMNALLQCAKFGAKT- 86

Query: 71  LPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
             E ++YVT  PC  C  AI  + I  +YY 
Sbjct: 87  -EEAEIYVTHFPCLQCCKAIIQSGITAVYYA 116


>gi|256851965|ref|ZP_05557352.1| ComE operon protein 2 [Lactobacillus jensenii 27-2-CHN]
 gi|260661465|ref|ZP_05862378.1| ComE operon protein 2 [Lactobacillus jensenii 115-3-CHN]
 gi|282931728|ref|ZP_06337216.1| ComE operon protein 2 [Lactobacillus jensenii 208-1]
 gi|297205164|ref|ZP_06922560.1| competence protein ComEB [Lactobacillus jensenii JV-V16]
 gi|256615377|gb|EEU20567.1| ComE operon protein 2 [Lactobacillus jensenii 27-2-CHN]
 gi|260547920|gb|EEX23897.1| ComE operon protein 2 [Lactobacillus jensenii 115-3-CHN]
 gi|281304171|gb|EFA96285.1| ComE operon protein 2 [Lactobacillus jensenii 208-1]
 gi|297149742|gb|EFH30039.1| competence protein ComEB [Lactobacillus jensenii JV-V16]
          Length = 160

 Score = 68.0 bits (166), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 29/112 (25%), Positives = 47/112 (41%), Gaps = 18/112 (16%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELK----DV--------- 50
              FM  AL  +Q +     + VG+V V + +II    N +   +    DV         
Sbjct: 9   NQYFMMQALVISQRSTCNRAL-VGSVLVKDKRIIGTGYNGSVTGQEHCDDVGHQMVDGHC 67

Query: 51  --TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
             T H+E+  +   C       L + ++YVT  PC  C  A+  A I+++ Y
Sbjct: 68  IRTIHSEMNTLIQ-CAKNGVSTL-DTEIYVTHFPCYNCTKALIQAGIKKVNY 117


>gi|322389277|ref|ZP_08062837.1| cytidine and deoxycytidylate deaminase [Streptococcus parasanguinis
           ATCC 903]
 gi|321144021|gb|EFX39439.1| cytidine and deoxycytidylate deaminase [Streptococcus parasanguinis
           ATCC 903]
          Length = 160

 Score = 68.0 bits (166), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 29/112 (25%), Positives = 40/112 (35%), Gaps = 19/112 (16%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKD-------------- 49
              F + AL  +  A       VGAV V +NK+I+   N +    D              
Sbjct: 14  DEYFAAQALLISNRATCNRAK-VGAVLVKDNKVIATGYNGSVSGTDHCLEDGCLMVEGHC 72

Query: 50  -VTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
             T HAE+ AI  G      +       YVT  PC  C   +     +R+ Y
Sbjct: 73  VRTIHAEVNAILQGAERGIPK---GFTAYVTHFPCLNCTKQLLQVGCKRVVY 121


>gi|155372299|ref|NP_001094762.1| deoxycytidylate deaminase [Bos taurus]
 gi|151555965|gb|AAI49762.1| DCTD protein [Bos taurus]
 gi|296472434|gb|DAA14549.1| dCMP deaminase [Bos taurus]
          Length = 178

 Score = 68.0 bits (166), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 30/116 (25%), Positives = 43/116 (37%), Gaps = 25/116 (21%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNR------------NRELKDVT 51
             FM+ A   AQ +   N   VGA  V   NKI+    N              R  +++ 
Sbjct: 17  EYFMAVAFLSAQRSKDPNSQ-VGACIVNAENKIVGIGYNGMPNGCSDDLLPWRRTAENIL 75

Query: 52  A-------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
                   HAE+ AI       +   +    +YV L PC  CA  I  A I+ + +
Sbjct: 76  DTKYPYVCHAELNAIMN----KNSADVKGCTMYVALFPCNECAKLIIQAGIKEVIF 127


>gi|313905030|ref|ZP_07838400.1| dCMP deaminase [Eubacterium cellulosolvens 6]
 gi|313470100|gb|EFR65432.1| dCMP deaminase [Eubacterium cellulosolvens 6]
          Length = 162

 Score = 68.0 bits (166), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 35/124 (28%), Positives = 50/124 (40%), Gaps = 31/124 (25%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVL-NNKIISRAGNR------------N 44
           +     FM      A+ A +R++ P   VG+  V  +NKI+S   N             +
Sbjct: 9   ISWDEYFM----AVARLAGMRSKDPNSQVGSCIVSPDNKILSIGYNGFPRGCSDEEFPWS 64

Query: 45  RELKDVTA-------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRR 97
           RE +D          H+E+ AI           L    LYV+L PC  CA AI  A I+ 
Sbjct: 65  REDEDPLRTKYVYVTHSELNAILN----YRGGSLEGSKLYVSLFPCNECAKAIIQAGIKT 120

Query: 98  LYYG 101
           + Y 
Sbjct: 121 VIYA 124


>gi|167760281|ref|ZP_02432408.1| hypothetical protein CLOSCI_02654 [Clostridium scindens ATCC 35704]
 gi|167662164|gb|EDS06294.1| hypothetical protein CLOSCI_02654 [Clostridium scindens ATCC 35704]
          Length = 164

 Score = 68.0 bits (166), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 35/155 (22%), Positives = 53/155 (34%), Gaps = 36/155 (23%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVL-NNKIISRAGNR------------N 44
           +     FM  A+     +      P   VG   V  +NKI+S   N              
Sbjct: 11  ISWDEYFMGVAMLSGMRSKD----PNTQVGCCIVSQDNKILSMGYNGLPMGCSDDEFPWV 66

Query: 45  RELKDV-------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRR 97
           RE  D        T H+E+ AI           L    LYV+L PC  CA AI  + I+ 
Sbjct: 67  REGDDPLETKYVYTVHSELNAILN----YRGGSLEGAKLYVSLFPCNECAKAIIQSGIKE 122

Query: 98  LYYGASN-PKGGGIENGTQFYTLATCH----HSPE 127
           + Y  +       ++   + +  A  +    H  +
Sbjct: 123 VIYDCNKYEDTSSVKASMRMFDAAGVNYHQYHRTQ 157


>gi|153956292|ref|YP_001397057.1| deaminase [Clostridium kluyveri DSM 555]
 gi|219856609|ref|YP_002473731.1| hypothetical protein CKR_3266 [Clostridium kluyveri NBRC 12016]
 gi|146349150|gb|EDK35686.1| Predicted deaminase [Clostridium kluyveri DSM 555]
 gi|219570333|dbj|BAH08317.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 141

 Score = 68.0 bits (166), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 32/120 (26%), Positives = 44/120 (36%), Gaps = 28/120 (23%)

Query: 1   MKKG--NVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGN---RNRELKD--- 49
           M+K   N F+  A + A+ +      P   VGAV V N +I     N   R  E  D   
Sbjct: 4   MRKDWDNYFIDIAFQVAERSTC----PRLHVGAVLVKNRRIKGTGYNGSPRGLEHCDEAG 59

Query: 50  ---------VTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
                     T HAE+  +         +      LYVT  PC  C   I    ++R+ Y
Sbjct: 60  CYMKDNHCIRTIHAEVNCLLEVS----PDDRENSTLYVTHMPCPECQKLIINCGVKRVIY 115


>gi|297674743|ref|XP_002815371.1| PREDICTED: deoxycytidylate deaminase-like isoform 1 [Pongo abelii]
 gi|297674745|ref|XP_002815372.1| PREDICTED: deoxycytidylate deaminase-like isoform 2 [Pongo abelii]
 gi|297674747|ref|XP_002815373.1| PREDICTED: deoxycytidylate deaminase-like isoform 3 [Pongo abelii]
 gi|62286511|sp|Q5RC69|DCTD_PONAB RecName: Full=Deoxycytidylate deaminase; AltName: Full=dCMP
           deaminase
 gi|55727775|emb|CAH90638.1| hypothetical protein [Pongo abelii]
          Length = 178

 Score = 68.0 bits (166), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 31/116 (26%), Positives = 42/116 (36%), Gaps = 25/116 (21%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNR------------NRELKDVT 51
             FM+ A   AQ +   N   VGA  V   NKI+    N              R  K+  
Sbjct: 17  EYFMAVAFLSAQRSKDPNSQ-VGACIVNSENKIVGIGYNGMPNGCSDDQLPWRRTAKNKL 75

Query: 52  A-------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
                   HAE+ AI       +   +    +YV L PC  CA  I  A I+ + +
Sbjct: 76  DTKYPYVCHAELNAIMN----KNSTDVKGCSMYVALFPCNECAKLIIQAGIKEVIF 127


>gi|332244691|ref|XP_003271507.1| PREDICTED: deoxycytidylate deaminase-like isoform 2 [Nomascus
           leucogenys]
 gi|332244693|ref|XP_003271508.1| PREDICTED: deoxycytidylate deaminase-like isoform 3 [Nomascus
           leucogenys]
 gi|332244695|ref|XP_003271509.1| PREDICTED: deoxycytidylate deaminase-like isoform 4 [Nomascus
           leucogenys]
          Length = 178

 Score = 68.0 bits (166), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 31/116 (26%), Positives = 42/116 (36%), Gaps = 25/116 (21%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNR------------NRELKDVT 51
             FM+ A   AQ +   N   VGA  V   NKI+    N              R  K+  
Sbjct: 17  EYFMAVAFLSAQRSKDPNSQ-VGACIVNSENKIVGIGYNGMPNGCSDDLLPWRRTAKNKL 75

Query: 52  A-------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
                   HAE+ AI       +   +    +YV L PC  CA  I  A I+ + +
Sbjct: 76  DTKYPYVCHAELNAIMN----KNSTDVKGCSMYVALFPCNECAKLIIQAGIKEVIF 127


>gi|330995533|ref|ZP_08319436.1| putative ComE operon protein 2 [Paraprevotella xylaniphila YIT
           11841]
 gi|329575313|gb|EGG56858.1| putative ComE operon protein 2 [Paraprevotella xylaniphila YIT
           11841]
          Length = 149

 Score = 68.0 bits (166), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 30/115 (26%), Positives = 46/115 (40%), Gaps = 18/115 (15%)

Query: 2   KKGNV---FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRN--------RELKDV 50
           KK  +   ++  A   A+N+       VGA+ V +  IIS   N           +   +
Sbjct: 7   KKHELDLRYLRMARIWAENSYCERRK-VGALIVKDKMIISDGYNGTPAGFENVCEDENHL 65

Query: 51  T----AHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
           T     HAE  AI    R  +        LYVT  PC  C+  I  + I++++Y 
Sbjct: 66  TKPYVLHAEANAITKIARSGNNS--EGATLYVTDAPCIECSKLIIQSGIKKVFYA 118


>gi|317054801|ref|YP_004103268.1| dCMP deaminase [Ruminococcus albus 7]
 gi|315447070|gb|ADU20634.1| dCMP deaminase [Ruminococcus albus 7]
          Length = 159

 Score = 68.0 bits (166), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 34/128 (26%), Positives = 46/128 (35%), Gaps = 32/128 (25%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLN-NKIISRAGNR----NRELKDV-- 50
           +     FM  A   A+ +      P   VGA  V   NKI+S   N       +      
Sbjct: 7   LSWDEYFMGIAHLSAKRSKD----PSTQVGACIVSEENKILSVGYNGMPTGCNDDDMPWE 62

Query: 51  ------------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98
                         HAE+ AI       S   L    +YV+L PC  CA AI  + I+ +
Sbjct: 63  RDGDFLETKYPFVCHAELNAILN----RSTGSLKNARIYVSLFPCNECAKAIIQSGIKEV 118

Query: 99  YYGASNPK 106
            YG  + K
Sbjct: 119 IYG--DDK 124


>gi|238855583|ref|ZP_04645885.1| ComE operon protein 2 [Lactobacillus jensenii 269-3]
 gi|260664775|ref|ZP_05865626.1| ComE operon protein 2 [Lactobacillus jensenii SJ-7A-US]
 gi|282932731|ref|ZP_06338139.1| ComE operon protein 2 [Lactobacillus jensenii 208-1]
 gi|313472663|ref|ZP_07813152.1| ComE operon protein 2 [Lactobacillus jensenii 1153]
 gi|238831800|gb|EEQ24135.1| ComE operon protein 2 [Lactobacillus jensenii 269-3]
 gi|239529376|gb|EEQ68377.1| ComE operon protein 2 [Lactobacillus jensenii 1153]
 gi|260561258|gb|EEX27231.1| ComE operon protein 2 [Lactobacillus jensenii SJ-7A-US]
 gi|281303141|gb|EFA95335.1| ComE operon protein 2 [Lactobacillus jensenii 208-1]
          Length = 160

 Score = 68.0 bits (166), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 30/111 (27%), Positives = 46/111 (41%), Gaps = 18/111 (16%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELK----DV---------- 50
             FM  AL  +Q +     + VG+V V + +II    N +   +    DV          
Sbjct: 10  QYFMMQALVISQRSTCNRAL-VGSVLVKDKRIIGTGYNGSVTGQAHCDDVGHQMVDGHCV 68

Query: 51  -TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
            T H+E+  +   C       L   ++YVT  PC  C  A+  A I+R+ Y
Sbjct: 69  RTIHSEMNTLIQ-CAKNGVSTLN-TEIYVTHFPCYNCTKALIQAGIKRVNY 117


>gi|148925766|ref|ZP_01809454.1| putative riboflavin-specific deaminase [Campylobacter jejuni subsp.
           jejuni CG8486]
 gi|145845776|gb|EDK22867.1| putative riboflavin-specific deaminase [Campylobacter jejuni subsp.
           jejuni CG8486]
          Length = 336

 Score = 68.0 bits (166), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 40/177 (22%), Positives = 64/177 (36%), Gaps = 44/177 (24%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAV-LNNKIIS-RAGNRNRELKDVTAHAE 55
           MK    +M+ AL EA         P   VG V +  N KI++ +A       K   AHAE
Sbjct: 11  MK--EFYMNLALNEAWK-YQFLTYPNPAVGCVILDKNEKILAIKAH-----EKAGLAHAE 62

Query: 56  ILAIRMGCRILSQEI--------------------LPEVDLYVTLEPC------TMCAAA 89
           + AI    + L  EI                      +   +VTLEPC        CA  
Sbjct: 63  LNAIAHAFKSLRPEISLPKEANALHEFICKNHQGVFKDSIAFVTLEPCSHQGKTPPCAKL 122

Query: 90  ISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
            S    ++++    +        G +F          E+   I ++  +++++ F K
Sbjct: 123 FSELGFKKIFISVKDGNKIASG-GAEFLKKQG----IEVEFDILKEEGKKLLKPFLK 174


>gi|305665639|ref|YP_003861926.1| deoxycytidylate deaminase [Maribacter sp. HTCC2170]
 gi|88710395|gb|EAR02627.1| deoxycytidylate deaminase [Maribacter sp. HTCC2170]
          Length = 147

 Score = 68.0 bits (166), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 36/152 (23%), Positives = 51/152 (33%), Gaps = 31/152 (20%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTA--------- 52
           K    ++  A E  + +    +  VGA+ V +  IIS   N        T          
Sbjct: 8   KYDKAYLRMAQEWGKLSFCERKQ-VGAIVVKDRMIISDGYNGT-----PTGFENVCEDEE 61

Query: 53  --------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASN 104
                   HAE  AI                LY+TL PC  C+  I  + I+R+ Y    
Sbjct: 62  GYTKWYVLHAEANAISKVASSTQS--CEGATLYITLSPCRECSKLIHQSGIKRVVY---- 115

Query: 105 PKGGGIENGTQFYTLAT--CHHSPEIYPGISE 134
            K     +G +F   A     H P I   + E
Sbjct: 116 KKAYKDGSGLEFLEKAGVDLVHMPVIEESVVE 147


>gi|295102170|emb|CBK99715.1| Deoxycytidylate deaminase [Faecalibacterium prausnitzii L2-6]
          Length = 159

 Score = 68.0 bits (166), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 32/122 (26%), Positives = 40/122 (32%), Gaps = 30/122 (24%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLN-NKIISRAGNRN-----------R 45
           +     FM  AL  A  +      P   VGA  V   NKI+S   N              
Sbjct: 7   INWDEYFMGIALLTAMRSKD----PSSQVGACIVSPENKILSLGYNGMPIGCDDDAMPWE 62

Query: 46  ELKDVTA-------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98
              +          HAE+ AI           L    +YVTL PC  C  AI  + I  +
Sbjct: 63  REGEPLNTKYMYVCHAELNAILNSAHN----NLKGARVYVTLFPCNECTKAIIQSGIAEV 118

Query: 99  YY 100
            Y
Sbjct: 119 VY 120


>gi|332244689|ref|XP_003271506.1| PREDICTED: deoxycytidylate deaminase-like isoform 1 [Nomascus
           leucogenys]
 gi|332244697|ref|XP_003271510.1| PREDICTED: deoxycytidylate deaminase-like isoform 5 [Nomascus
           leucogenys]
          Length = 189

 Score = 67.6 bits (165), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 31/116 (26%), Positives = 42/116 (36%), Gaps = 25/116 (21%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNR------------NRELKDVT 51
             FM+ A   AQ +   N   VGA  V   NKI+    N              R  K+  
Sbjct: 28  EYFMAVAFLSAQRSKDPNSQ-VGACIVNSENKIVGIGYNGMPNGCSDDLLPWRRTAKNKL 86

Query: 52  A-------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
                   HAE+ AI       +   +    +YV L PC  CA  I  A I+ + +
Sbjct: 87  DTKYPYVCHAELNAIMN----KNSTDVKGCSMYVALFPCNECAKLIIQAGIKEVIF 138


>gi|307720625|ref|YP_003891765.1| riboflavin biosynthesis protein RibD [Sulfurimonas autotrophica DSM
           16294]
 gi|306978718|gb|ADN08753.1| riboflavin biosynthesis protein RibD [Sulfurimonas autotrophica DSM
           16294]
          Length = 339

 Score = 67.6 bits (165), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 37/181 (20%), Positives = 63/181 (34%), Gaps = 46/181 (25%)

Query: 1   MK-KGNVFMSCALEEAQN--AALRNEIPVGAVAVLN-NKIIS-RAGNRNRELKDVTAHAE 55
           M+   N +M+ A+ EA            VG   V    ++++  A ++  E      HAE
Sbjct: 1   MEIDHNFYMNLAISEAWKYQGLTYANPAVGCSIVGEHGELLAVEAHHKAGEP-----HAE 55

Query: 56  ILAIRMGCRIL----------------------SQEILPEVDLYVTLEPC------TMCA 87
           + AI+     L                         I  +  LY TLEPC        CA
Sbjct: 56  VNAIKAAYYKLTQDEKILQLISSSQIHIYLLQNHNNIFKKCSLYSTLEPCSHVGKTPSCA 115

Query: 88  AAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF-FK 146
             I+   I+ ++ G  +       NG      +  +    I   + +Q+   ++  F FK
Sbjct: 116 NLIAELGIKNVFVGVEDFNTDAA-NGNTVLEKSGAN----ISLHVEQQKCEDLL--FPFK 168

Query: 147 E 147
           +
Sbjct: 169 K 169


>gi|156554302|ref|XP_001602407.1| PREDICTED: similar to deoxycytidylate deaminase [Nasonia
           vitripennis]
          Length = 206

 Score = 67.6 bits (165), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 32/120 (26%), Positives = 44/120 (36%), Gaps = 31/120 (25%)

Query: 4   GNVFMSCALEEAQNAALRNEIP---VGAVAVLNNK-IISRAGN---------------RN 44
            + FMS A   +  +      P   VGA  V  +K I+    N                +
Sbjct: 36  DDYFMSVAFLASMRSKD----PCTQVGACIVNEDKKIVGVGYNGMPIGCNDDDFSWKKAH 91

Query: 45  RELKDV----TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
               D       HAE+ AI       + E +    LYV L PC  CA  I  + I+R+YY
Sbjct: 92  ESELDSKFLYVCHAELNAILN----KNSENVKNCTLYVGLFPCNECAKVIIQSGIKRVYY 147


>gi|262047267|ref|ZP_06020225.1| dCMP deaminase [Lactobacillus crispatus MV-3A-US]
 gi|260572512|gb|EEX29074.1| dCMP deaminase [Lactobacillus crispatus MV-3A-US]
          Length = 159

 Score = 67.6 bits (165), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 30/111 (27%), Positives = 47/111 (42%), Gaps = 18/111 (16%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELK----DV---------- 50
             FM  AL  AQ +     + VG+V V NN+II    N +   +    DV          
Sbjct: 9   QYFMMQALVIAQRSTCNRAL-VGSVLVKNNRIIGTGYNGSVSGQPHCDDVGHQMVDGHCV 67

Query: 51  -TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
            T H+E+ AI    +          ++YVT  PC  C  ++  A ++++ Y
Sbjct: 68  RTIHSEMNAIIQCAKFGVST--ENTEIYVTHFPCYNCCRSLLQAGVKKINY 116


>gi|134300992|ref|YP_001114488.1| CMP/dCMP deaminase [Desulfotomaculum reducens MI-1]
 gi|134053692|gb|ABO51663.1| CMP/dCMP deaminase, zinc-binding protein [Desulfotomaculum reducens
           MI-1]
          Length = 147

 Score = 67.6 bits (165), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 29/124 (23%), Positives = 44/124 (35%), Gaps = 32/124 (25%)

Query: 4   GNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGN------------------- 42
              FM      A  +    R    VGAV V +N+I++   N                   
Sbjct: 6   DEYFMEITRVVATRSTCLRRK---VGAVIVKDNRILATGYNGAPAGLTHCLEIGCLREKL 62

Query: 43  -----RNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRR 97
                +  EL     HAE  AI      +    +    +YVT +PC MC+  I  A I++
Sbjct: 63  GVPSGQRHELCRAL-HAEQNAIIQAA--VHGTAIQGSIIYVTDQPCVMCSKMIVNAGIKK 119

Query: 98  LYYG 101
           + + 
Sbjct: 120 VIFA 123


>gi|198431901|ref|XP_002131408.1| PREDICTED: similar to dCMP deaminase [Ciona intestinalis]
          Length = 191

 Score = 67.6 bits (165), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 31/122 (25%), Positives = 46/122 (37%), Gaps = 30/122 (24%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLN-NKIISRAGN-RNRELKD------ 49
           ++  + FMS A   AQ +      P   VGA  V + NKI+    N       D      
Sbjct: 28  LEWKDYFMSVAFLSAQRSKD----PSTQVGACIVNDENKIVGIGYNGMPNGCHDDELPWS 83

Query: 50  VTA-----------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98
            T            HAE+ AI       +   +    ++V L PC  CA  I  + I+ +
Sbjct: 84  RTGDWLDTKYPYVCHAEMNAIMN----KNCSSVSGCRIFVALFPCNECAKLIIQSGIKEV 139

Query: 99  YY 100
           +Y
Sbjct: 140 FY 141


>gi|198412532|ref|XP_002130499.1| PREDICTED: similar to dCMP deaminase [Ciona intestinalis]
          Length = 191

 Score = 67.6 bits (165), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 31/122 (25%), Positives = 46/122 (37%), Gaps = 30/122 (24%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLN-NKIISRAGN-RNRELKD------ 49
           ++  + FMS A   AQ +      P   VGA  V + NKI+    N       D      
Sbjct: 28  LEWKDYFMSVAFLSAQRSKD----PSTQVGACIVNDENKIVGIGYNGMPNGCHDDELSWS 83

Query: 50  VTA-----------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98
            T            HAE+ AI       +   +    ++V L PC  CA  I  + I+ +
Sbjct: 84  RTGDWLDTKYPYVCHAEMNAIMN----KNCSSVSGCRIFVALFPCNECAKLIIQSGIKEV 139

Query: 99  YY 100
           +Y
Sbjct: 140 FY 141


>gi|17557019|ref|NP_498980.1| hypothetical protein ZK643.2 [Caenorhabditis elegans]
 gi|267457|sp|P30648|DCTD_CAEEL RecName: Full=Probable deoxycytidylate deaminase; AltName:
           Full=dCMP deaminase
 gi|3881681|emb|CAA77473.1| C. elegans protein ZK643.2, confirmed by transcript evidence
           [Caenorhabditis elegans]
          Length = 197

 Score = 67.6 bits (165), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 30/121 (24%), Positives = 50/121 (41%), Gaps = 29/121 (23%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAV-LNNKIISRAGNR----------NRE 46
           +KK   F+  A   +  +      P   VG V V  +N I+S   N             +
Sbjct: 48  LKKHQRFLRIAKVTSLRSKD----PNTQVGCVIVDKDNCIVSVGYNGFPIGVDDDVFRWD 103

Query: 47  LKDV-------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLY 99
            +D          HAE+ AI    +  +   L +  +YVTL PC  CA  +  +R++++Y
Sbjct: 104 KEDPEDNKHLYVVHAEMNAIIN--KRCTT--LHDCTVYVTLFPCNKCAQMLIQSRVKKVY 159

Query: 100 Y 100
           +
Sbjct: 160 F 160


>gi|117924693|ref|YP_865310.1| CMP/dCMP deaminase, zinc-binding [Magnetococcus sp. MC-1]
 gi|117608449|gb|ABK43904.1| CMP/dCMP deaminase, zinc-binding protein [Magnetococcus sp. MC-1]
          Length = 167

 Score = 67.6 bits (165), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 27/127 (21%), Positives = 47/127 (37%), Gaps = 25/127 (19%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGN------------RNRELKDVT 51
              +M  A   A+ +   +   VGAV V + ++++   N              RE    +
Sbjct: 7   DIHWMRVAKLAAEMSTCASGRRVGAVFVRDKRLLATGFNGVPSGYPHPTSCARREAGVPS 66

Query: 52  ---------AHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY-- 100
                    AHAE   I    R   +  L    +YVT  PC  C  A++   ++ ++Y  
Sbjct: 67  GQGLGLCVCAHAEANGIANAGRHGIK--LEGCRVYVTTHPCGACMGALANIGVKEVFYAE 124

Query: 101 GASNPKG 107
              +P+ 
Sbjct: 125 AYDDPRA 131


>gi|222099239|ref|YP_002533807.1| Deoxycytidylate deaminase [Thermotoga neapolitana DSM 4359]
 gi|221571629|gb|ACM22441.1| Deoxycytidylate deaminase [Thermotoga neapolitana DSM 4359]
          Length = 199

 Score = 67.6 bits (165), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 26/123 (21%), Positives = 49/123 (39%), Gaps = 32/123 (26%)

Query: 4   GNVFMSCALEEAQNA---ALRNEIPVGAVAVLNNKIISRAGNR-------NRELKDVTA- 52
            + FM  A   ++ +     +    VGAV V +++I++   N+         E+  +   
Sbjct: 55  DSYFMRIARMVSERSTCFHRK----VGAVIVKDHRILATGYNQPPSKFPHCNEVGCIRDD 110

Query: 53  ---------------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRR 97
                          HAE  A+    +      +    +YVT +PC++CA  +  A I+R
Sbjct: 111 LGINSGEHQEICYALHAEQNALMQAAKFGIA--VNGATIYVTHKPCSICARLLVNAGIKR 168

Query: 98  LYY 100
           + Y
Sbjct: 169 VVY 171


>gi|260886275|ref|ZP_05897538.1| putative deoxycytidylate deaminase [Selenomonas sputigena ATCC
           35185]
 gi|330839740|ref|YP_004414320.1| dCMP deaminase [Selenomonas sputigena ATCC 35185]
 gi|260863994|gb|EEX78494.1| putative deoxycytidylate deaminase [Selenomonas sputigena ATCC
           35185]
 gi|329747504|gb|AEC00861.1| dCMP deaminase [Selenomonas sputigena ATCC 35185]
          Length = 163

 Score = 67.6 bits (165), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 28/122 (22%), Positives = 38/122 (31%), Gaps = 31/122 (25%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNK-IISRAGN-RNRELKDV----- 50
           +     FM  AL     +      P   VGA  V  +K I+    N       D      
Sbjct: 3   ISWDEYFMGIALFSKYRSKD----PHTQVGACIVNEDKHIVGVGYNGMPNGCSDAEFPWG 58

Query: 51  ------------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98
                         HAE+ AI           L    +Y +L PC  C  AI  + I+ +
Sbjct: 59  STGEFGDKKYAYVVHAELNAILNA-----STSLKGCRIYTSLFPCNECCKAIIQSGIKEV 113

Query: 99  YY 100
            Y
Sbjct: 114 IY 115


>gi|126331283|ref|XP_001370213.1| PREDICTED: similar to Dctd protein [Monodelphis domestica]
          Length = 345

 Score = 67.6 bits (165), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 32/116 (27%), Positives = 42/116 (36%), Gaps = 25/116 (21%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGN-RNRELKD------VTA---- 52
             FM+ A   AQ +   N   VGA  V   NKI+    N       D       TA    
Sbjct: 185 EYFMAVAFLSAQRSKDPNSQ-VGACIVNAENKIVGIGYNGMPNGCSDDLLPWSRTAEKKL 243

Query: 53  --------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
                   HAE+ AI       +   +    +YV L PC  CA  I  A I+ + +
Sbjct: 244 DTKYPYVCHAELNAIMN----KNSADVKGCTMYVALFPCNECAKLIIQAGIKEVIF 295


>gi|163800337|ref|ZP_02194238.1| deoxycytidylate deaminase [Vibrio sp. AND4]
 gi|159175780|gb|EDP60574.1| deoxycytidylate deaminase [Vibrio sp. AND4]
          Length = 152

 Score = 67.6 bits (165), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 26/86 (30%), Positives = 34/86 (39%), Gaps = 18/86 (20%)

Query: 26  VGAVAVLNNKIISRAGN-------------RNRELKDVTAHAEILAIRMGCRILSQEILP 72
           VGAV    N+I+S   N                     T HAE  AI     + S+  L 
Sbjct: 27  VGAVITKQNRIVSVGFNGYPHGVSDSVDTDERELKYLKTLHAEENAI-----LFSKRDLD 81

Query: 73  EVDLYVTLEPCTMCAAAISLARIRRL 98
             +++VT  PC  CAA I    I R+
Sbjct: 82  GCEIWVTHFPCPNCAAKIIQTGISRV 107


>gi|315928823|gb|EFV08089.1| riboflavin biosynthesis protein RibD [Campylobacter jejuni subsp.
           jejuni 305]
          Length = 335

 Score = 67.6 bits (165), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 38/173 (21%), Positives = 62/173 (35%), Gaps = 44/173 (25%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAV-LNNKIIS-RAGNRNRELKDVTAHAE 55
           MK    +M+ AL EA         P   VG V +  N KI++ +A       K   AHAE
Sbjct: 11  MK--EFYMNLALNEAWK-YQFLTYPNPAVGCVILDKNEKILAIKAH-----EKAGLAHAE 62

Query: 56  ILAIRMGCRILSQEI--------------------LPEVDLYVTLEPC------TMCAAA 89
           + AI    + L  EI                      +   +VTLEPC        CA  
Sbjct: 63  LNAIAHAFKSLRPEISLPKEANALHEFICKNHQGVFKDSIAFVTLEPCSHQGKTPPCAKL 122

Query: 90  ISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQ 142
            S    ++++    +        G +F          E+   I ++  +++++
Sbjct: 123 FSELGFKKIFISVKDENKIASG-GAEFLKKQG----IEVEFDILKEEGKKLLK 170


>gi|209732624|gb|ACI67181.1| Deoxycytidylate deaminase [Salmo salar]
          Length = 195

 Score = 67.6 bits (165), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 31/119 (26%), Positives = 41/119 (34%), Gaps = 31/119 (26%)

Query: 5   NVFMSCALEEAQNAALRNEIP---VGAVAV-LNNKIISRAGN------------------ 42
             FM+ A   AQ +      P   VGA  V   NKI+    N                  
Sbjct: 34  EYFMAVAFLSAQRSKD----PSSQVGACIVNQENKIVGIGYNGMPNGCDDDLLPWARSAD 89

Query: 43  RNRELKDV-TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
              + K     HAE+ AI       +   +    +YV L PC  CA  I  A I+ + Y
Sbjct: 90  DRLDTKYPYVCHAELNAIMN----KNSADVKGCSMYVALFPCNECAKLIIQAGIKDVVY 144


>gi|218135381|ref|ZP_03464185.1| hypothetical protein BACPEC_03286 [Bacteroides pectinophilus ATCC
           43243]
 gi|217990766|gb|EEC56777.1| hypothetical protein BACPEC_03286 [Bacteroides pectinophilus ATCC
           43243]
          Length = 161

 Score = 67.6 bits (165), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 40/162 (24%), Positives = 53/162 (32%), Gaps = 43/162 (26%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAV-LNNKIISRAGN-RNR---------- 45
           +     FM  A+     +      P   VGA  V  +NKI+S   N   R          
Sbjct: 9   ISWDEYFMGVAMLSGMRSKD----PNTQVGACIVSKDNKILSMGYNGLPRGCSDDEFPWC 64

Query: 46  ELKDV-------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98
              D        TAH+E+ AI           L    +YVTL PC  CA AI  A I  +
Sbjct: 65  REGDPLDNKYIYTAHSELNAILN----YRGGSLENAKIYVTLFPCNECAKAIIQAGITTV 120

Query: 99  YYGASNPKGGGIEN-----------GTQFYTLATCHHSPEIY 129
            Y   + K     +           G ++Y         EI 
Sbjct: 121 VY--DDDKYATSASVIASKRMFDAAGVRYYRYQRTGRKIEIT 160


>gi|194044048|ref|XP_001925118.1| PREDICTED: deoxycytidylate deaminase-like [Sus scrofa]
          Length = 178

 Score = 67.6 bits (165), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 30/116 (25%), Positives = 43/116 (37%), Gaps = 25/116 (21%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNR------------NRELKDVT 51
             FM+ A   AQ +   N   VGA  V   NKI+    N              R  +++ 
Sbjct: 17  EYFMAVAFLSAQRSKDPNSQ-VGACIVNAENKIVGIGYNGMPNGCSDDLLPWRRTAENIL 75

Query: 52  A-------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
                   HAE+ AI       +   +    +YV L PC  CA  I  A I+ + +
Sbjct: 76  DTKYPYVCHAELNAIMN----KNSADVKGCTMYVALFPCNECAKLIIQAGIKEVIF 127


>gi|37676740|ref|NP_937136.1| deoxycytidylate deaminase [Vibrio vulnificus YJ016]
 gi|37201283|dbj|BAC97106.1| deoxycytidylate deaminase [Vibrio vulnificus YJ016]
          Length = 152

 Score = 67.6 bits (165), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 26/86 (30%), Positives = 34/86 (39%), Gaps = 18/86 (20%)

Query: 26  VGAVAVLNNKIISRAGN-------------RNRELKDVTAHAEILAIRMGCRILSQEILP 72
           VGAV    N+I+S   N                     T HAE  AI     + S+  L 
Sbjct: 27  VGAVITKQNRIVSVGFNGYPHGVSDSVDTDERELKYLKTLHAEENAI-----LFSKRDLD 81

Query: 73  EVDLYVTLEPCTMCAAAISLARIRRL 98
             +++VT  PC  CAA I    I R+
Sbjct: 82  GCEIWVTHFPCPNCAAKIIQTGISRV 107


>gi|84515381|ref|ZP_01002743.1| riboflavin biosynthesis protein RibD [Loktanella vestfoldensis
           SKA53]
 gi|84510664|gb|EAQ07119.1| riboflavin biosynthesis protein RibD [Loktanella vestfoldensis
           SKA53]
          Length = 359

 Score = 67.6 bits (165), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 32/145 (22%), Positives = 50/145 (34%), Gaps = 21/145 (14%)

Query: 3   KGNVFMSCALEEAQNAALR--NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
               +M+ AL+  +    R      VG V V + +I+ R             HAE +A+ 
Sbjct: 2   TDARYMALALQLGRRGMGRVWPNPAVGCVIVNHGRIVGRGW----TQDGGRPHAETVALA 57

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
                          +YVTLEPC        CAAA+  A + R+     +P       G 
Sbjct: 58  QAG-----PDACGATVYVTLEPCAHHGQTPPCAAALIAAGVARVVVALGDPDARVAGRGI 112

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQ 139
                A       +  G+   ++R 
Sbjct: 113 ALLEQAG----IAVETGLLADQARA 133


>gi|315174005|gb|EFU18022.1| ComE operon protein 2 [Enterococcus faecalis TX1346]
          Length = 167

 Score = 67.6 bits (165), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 24/90 (26%), Positives = 35/90 (38%), Gaps = 17/90 (18%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKD---------------VTAHAEILAIRMGCRILSQEI 70
           VGA  V + +II+   N +                     T HAE+ AI    +      
Sbjct: 28  VGATIVRDKRIIAGGYNGSVSGGTHCIDEGCYVVDNHCVRTIHAEMNAILQCAKFGVPT- 86

Query: 71  LPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
               ++YVT  PC  C   I  A I+++YY
Sbjct: 87  -EGAEIYVTHFPCLQCTKMILQAGIKKIYY 115


>gi|228477298|ref|ZP_04061936.1| ComE operon protein 2 [Streptococcus salivarius SK126]
 gi|228251317|gb|EEK10488.1| ComE operon protein 2 [Streptococcus salivarius SK126]
          Length = 151

 Score = 67.6 bits (165), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 32/122 (26%), Positives = 45/122 (36%), Gaps = 18/122 (14%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKD---------------VTAHAEILAIRMGCRILSQEI 70
           VGAV V + +II+   N      D                T HAE+ A+    +      
Sbjct: 29  VGAVLVKDKRIIATGYNGGVSETDNCNEVGHYMEDGHCIRTVHAEMNALIQCAKEGIST- 87

Query: 71  LPEVDLYVTLEPCTMCAAAISLARIRRLYY-GASNPKGGGIENGTQFYTLATCHHSPEIY 129
               ++YVT  PC  C  A+  A I ++ Y     P    IE   Q       H  PE++
Sbjct: 88  -KNTEIYVTHFPCINCTKALLQAGIVKITYKANYRPHPFAIELMEQKGVSYLQHDVPEVH 146

Query: 130 PG 131
            G
Sbjct: 147 LG 148


>gi|158321591|ref|YP_001514098.1| CMP/dCMP deaminase zinc-binding [Alkaliphilus oremlandii OhILAs]
 gi|158141790|gb|ABW20102.1| CMP/dCMP deaminase zinc-binding [Alkaliphilus oremlandii OhILAs]
          Length = 145

 Score = 67.6 bits (165), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 29/122 (23%), Positives = 48/122 (39%), Gaps = 30/122 (24%)

Query: 4   GNVFMSCA-LEEAQNAALRNEIPVGAVAVLNNKIISRAGN-------------------- 42
              FM  A + + ++  LR +  VGAV V + ++++   N                    
Sbjct: 6   DEYFMEMAEIVKTRSTCLRRQ--VGAVVVKDRRVLASGYNGAPTGLKHCEETGCLRDRLG 63

Query: 43  ----RNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98
               +  EL     HAE  AI      L    L +  +YVT +PC +CA  +  A I ++
Sbjct: 64  IPSGQRHELCRGL-HAEQNAIIQAS--LHGVKLEDATIYVTHQPCIICAKMVINAGINKV 120

Query: 99  YY 100
            +
Sbjct: 121 VF 122


>gi|189502659|ref|YP_001958376.1| hypothetical protein Aasi_1340 [Candidatus Amoebophilus asiaticus
           5a2]
 gi|189498100|gb|ACE06647.1| hypothetical protein Aasi_1340 [Candidatus Amoebophilus asiaticus
           5a2]
          Length = 160

 Score = 67.6 bits (165), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 30/120 (25%), Positives = 46/120 (38%), Gaps = 29/120 (24%)

Query: 4   GNVFMSCALEEAQNAA---LRNEIPVGAVAVLNNKIISRAGN------------------ 42
            ++F+  AL+ A+ +    L+    VGAV   + +IIS   N                  
Sbjct: 7   DDIFIQLALQLAKRSHCVKLQ----VGAVLAKDTRIISIGYNGPPSGTYNCDEQWPGIGC 62

Query: 43  --RNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
               +    +  HAE  AI       +   +    LY+TL PC  CA  I    I+R+ Y
Sbjct: 63  PRDVKGGCSLAIHAEQNAILYALSNQAA--VTGATLYITLSPCLPCARIIFTVGIKRVVY 120


>gi|157104304|ref|XP_001648345.1| deoxycytidylate deaminase [Aedes aegypti]
 gi|108869217|gb|EAT33442.1| deoxycytidylate deaminase [Aedes aegypti]
          Length = 197

 Score = 67.6 bits (165), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 28/120 (23%), Positives = 41/120 (34%), Gaps = 31/120 (25%)

Query: 4   GNVFMSCALEEAQNAALRNEIP---VGAVAVLNN-KIISRAGNR------------NREL 47
              FM+ A   A+ +      P   VGA  V    KI+    N              +  
Sbjct: 25  NEYFMATAFLAARRSKD----PNTQVGACIVNEERKIVGVGYNGFPLGCSDDEFPWGKAS 80

Query: 48  KDVTA-------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
            D          HAE+ AI       +   +    +YV L PC  CA  I  ++I+ + Y
Sbjct: 81  LDPLGTKYLYVCHAEMNAILN----KNSSDVKNCTMYVALFPCNECAKIIIQSKIKEVIY 136


>gi|313675037|ref|YP_004053033.1| cmp/dcmp deaminase zinc-binding protein [Marivirga tractuosa DSM
           4126]
 gi|312941735|gb|ADR20925.1| CMP/dCMP deaminase zinc-binding protein [Marivirga tractuosa DSM
           4126]
          Length = 160

 Score = 67.6 bits (165), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 38/158 (24%), Positives = 55/158 (34%), Gaps = 26/158 (16%)

Query: 1   MKK---GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRN-RELKDV------ 50
           M+K    ++FM  A+  A+ +       VGAV     +IIS   N       +       
Sbjct: 1   MEKPQFDDIFMELAVNLAKRSHCIKRH-VGAVLTKETRIISIGYNGPPAGTHNCDEEFPG 59

Query: 51  -------------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRR 97
                          HAE  AI     + +   +    LYVTL PC  CA  I    I++
Sbjct: 60  KGCGLDSKGSCMLAIHAEQNAIMYA--VKNNASVENSTLYVTLSPCLSCARIIFSMGIKK 117

Query: 98  LYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQ 135
           + Y  S  +  G++       L       E Y G  E 
Sbjct: 118 VIYLNSYAEYKGLDRDEGLDFLEKFGVEVEKYRGNLEN 155


>gi|73979520|ref|XP_849027.1| PREDICTED: similar to Deoxycytidylate deaminase (dCMP deaminase)
           isoform 1 [Canis familiaris]
          Length = 178

 Score = 67.6 bits (165), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 32/116 (27%), Positives = 42/116 (36%), Gaps = 25/116 (21%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGN-RNRELKD------VTA---- 52
             FM+ A   AQ +   N   VGA  V   NKI+    N       D       TA    
Sbjct: 17  EYFMAVAFLAAQRSKDPNSQ-VGACIVNAENKIVGIGYNGMPNGCSDDHLPWERTAASKL 75

Query: 53  --------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
                   HAE+ AI       +   +    +YV L PC  CA  I  A I+ + +
Sbjct: 76  DTKYPYVCHAELNAIMN----KNSADVKGCTMYVALFPCNECAKLIIQAGIKEVIF 127


>gi|322494303|emb|CBZ29602.1| conserved hypothetical protein [Leishmania mexicana
           MHOM/GT/2001/U1103]
          Length = 547

 Score = 67.6 bits (165), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 21/69 (30%), Positives = 36/69 (52%), Gaps = 3/69 (4%)

Query: 72  PEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPG 131
             +DLYVT EPC MCA A+  +RI+R+++   N   GG+      + +A+ +H    Y  
Sbjct: 473 NGLDLYVTHEPCVMCAMALVHSRIQRVFFLFRNAVHGGLGGRYHVHVMASLNHHFSAYEC 532

Query: 132 ISEQRSRQI 140
                + ++
Sbjct: 533 ---TEAAEL 538


>gi|225714908|gb|ACO13300.1| Deoxycytidylate deaminase [Esox lucius]
          Length = 201

 Score = 67.6 bits (165), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 31/119 (26%), Positives = 41/119 (34%), Gaps = 31/119 (26%)

Query: 5   NVFMSCALEEAQNAALRNEIP---VGAVAV-LNNKIISRAGN------------------ 42
             FM+ A   AQ +      P   VGA  V   NKI+    N                  
Sbjct: 34  EYFMAVAFLPAQRSKD----PSSQVGACIVNPENKIVGIGYNGMPNGCDDDLLPWSRYAD 89

Query: 43  RNRELKDV-TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
              + K     HAE+ AI       +   +    +YV L PC  CA  I  A I+ + Y
Sbjct: 90  DRLDTKYPYVCHAELNAIMN----KNSADVKGCSMYVALFPCNECAKLIIQAGIKEVIY 144


>gi|167628994|ref|YP_001679493.1| come operon protein 2 [Heliobacterium modesticaldum Ice1]
 gi|167591734|gb|ABZ83482.1| come operon protein 2 [Heliobacterium modesticaldum Ice1]
          Length = 146

 Score = 67.6 bits (165), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 31/121 (25%), Positives = 44/121 (36%), Gaps = 28/121 (23%)

Query: 1   MKKG--NVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRN----------- 44
           M+K   + F+  A   +  +      P   VGAV V + +I     N +           
Sbjct: 1   MRKDWDSYFIDIAFAVSSRSTC----PRRSVGAVIVKDKRIKGTGYNGSPAGLPHCTDAG 56

Query: 45  ----RELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
                     T HAE+ AI       S E      +YVT  PC  CA  I  + IRR+ +
Sbjct: 57  CCMWNNHCVRTIHAEVNAIME----CSPEERKGATIYVTDRPCAECAKVIISSGIRRVVF 112

Query: 101 G 101
            
Sbjct: 113 A 113


>gi|146298293|ref|YP_001192884.1| CMP/dCMP deaminase, zinc-binding [Flavobacterium johnsoniae UW101]
 gi|146152711|gb|ABQ03565.1| CMP/dCMP deaminase, zinc-binding [Flavobacterium johnsoniae UW101]
          Length = 143

 Score = 67.6 bits (165), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 33/125 (26%), Positives = 47/125 (37%), Gaps = 27/125 (21%)

Query: 26  VGAVAVLNNKIISRAGNRN--------RELKDVTA----HAEILAIRMGCRILSQEILPE 73
           VGA+ V +  IIS   N           +   +T     HAE  AI    R         
Sbjct: 31  VGAIIVKDRMIISDGYNGTPSGFENCCEDEDGLTRWDVLHAEANAILKVARSTQS--CEG 88

Query: 74  VDLYVTLEPCTMCAAAISLARIRRLYY--GASNPKGGGIENGTQFYTLATCHHSPEIYP- 130
             LY+TL PC  C+  I  + I+R+ Y  G  +       +G QF   A      E+   
Sbjct: 89  ATLYITLSPCKECSKLIHQSGIKRVVYKDGYRDD------SGIQFLIKAG----VEVEHI 138

Query: 131 GISEQ 135
            + E+
Sbjct: 139 PVLEE 143


>gi|228941493|ref|ZP_04104043.1| ComE operon protein 2 [Bacillus thuringiensis serovar berliner ATCC
           10792]
 gi|228974423|ref|ZP_04134991.1| ComE operon protein 2 [Bacillus thuringiensis serovar thuringiensis
           str. T01001]
 gi|228981018|ref|ZP_04141320.1| ComE operon protein 2 [Bacillus thuringiensis Bt407]
 gi|228778678|gb|EEM26943.1| ComE operon protein 2 [Bacillus thuringiensis Bt407]
 gi|228785259|gb|EEM33270.1| ComE operon protein 2 [Bacillus thuringiensis serovar thuringiensis
           str. T01001]
 gi|228818143|gb|EEM64218.1| ComE operon protein 2 [Bacillus thuringiensis serovar berliner ATCC
           10792]
          Length = 188

 Score = 67.6 bits (165), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 25/91 (27%), Positives = 39/91 (42%), Gaps = 17/91 (18%)

Query: 26  VGAVAVLNNKIISRAGNRNRELK-----DV----------TAHAEILAIRMGCRILSQEI 70
           VGA  V + +II+   N + +       D           T HAE+ A+    +  ++  
Sbjct: 31  VGATIVRDKRIIAGGYNGSIKGGVHCIDDGCYVIDNHCVRTIHAEMNALLQCAKFGAKT- 89

Query: 71  LPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
             E ++YVT  PC  C  AI  + I  +YY 
Sbjct: 90  -EEAEIYVTHFPCLQCCKAIIQSGITAVYYA 119


>gi|62901894|gb|AAY18898.1| deoxycytidylate deaminase [synthetic construct]
          Length = 202

 Score = 67.6 bits (165), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 32/116 (27%), Positives = 42/116 (36%), Gaps = 25/116 (21%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGN-RNRELKD------VTA---- 52
             FM+ A   AQ +   N   VGA  V   NKI+    N       D       TA    
Sbjct: 41  EYFMAVAFLSAQRSKDPNSQ-VGACIVNSENKIVGIGYNGMPNGCSDDVLPWRRTAENKL 99

Query: 53  --------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
                   HAE+ AI       +   +    +YV L PC  CA  I  A I+ + +
Sbjct: 100 DTKYPYVCHAELNAIMN----KNSTDVKGCSMYVALFPCNECAKLIIQAGIKEVIF 151


>gi|260890091|ref|ZP_05901354.1| hypothetical protein GCWU000323_01253 [Leptotrichia hofstadii
           F0254]
 gi|260860114|gb|EEX74614.1| putative deoxycytidylate deaminase [Leptotrichia hofstadii F0254]
          Length = 161

 Score = 67.6 bits (165), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 31/122 (25%), Positives = 44/122 (36%), Gaps = 31/122 (25%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNK-IISRAGN-------------- 42
           +     FM  A      +      P   VGA  +  +K II    N              
Sbjct: 8   LSWDEYFMGIAFLSGMRSKD----PSTQVGACIIDEDKKIIGIGYNGFPMGSSDDSMPWG 63

Query: 43  ---RNRELKDV-TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98
                 E K     HAE+ AI     + S + L +  +YVT  PC  CA AI  + I+++
Sbjct: 64  KEGEFLETKYPYVVHAELNAI-----LNSIKSLKKCTIYVTHFPCNECAKAIVQSGIKKV 118

Query: 99  YY 100
            Y
Sbjct: 119 IY 120


>gi|294656404|ref|XP_458666.2| DEHA2D04598p [Debaryomyces hansenii CBS767]
 gi|199431447|emb|CAG86805.2| DEHA2D04598p [Debaryomyces hansenii]
          Length = 354

 Score = 67.6 bits (165), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 28/125 (22%), Positives = 43/125 (34%), Gaps = 30/125 (24%)

Query: 4   GNVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGN---------------RNRE 46
            + FM  A + A  A   N  +  VG V V  N++++   N               R  +
Sbjct: 201 DSYFMRLA-DLA--ALRSNCMKRRVGCVVVRGNRVMATGYNGTPRNLTNCNEGGCSRCNQ 257

Query: 47  LKDVTA--------HAEILAIRMGCR--ILSQEILPEVDLYVTLEPCTMCAAAISLARIR 96
            +   A        HAE  A+    R  I   +      LY    PC  C+  I  + I+
Sbjct: 258 GQGSGAALSTCLCLHAEENALLEAGRDRITGGQTGENSVLYCNTCPCLTCSIKIVQSGIK 317

Query: 97  RLYYG 101
            + Y 
Sbjct: 318 EVVYA 322


>gi|29376942|ref|NP_816096.1| comE operon protein 2, putative [Enterococcus faecalis V583]
 gi|227519834|ref|ZP_03949883.1| competence protein ComEB [Enterococcus faecalis TX0104]
 gi|227553981|ref|ZP_03984028.1| competence protein ComEB [Enterococcus faecalis HH22]
 gi|229545131|ref|ZP_04433856.1| competence protein ComEB [Enterococcus faecalis TX1322]
 gi|229549379|ref|ZP_04438104.1| competence protein ComEB [Enterococcus faecalis ATCC 29200]
 gi|255972085|ref|ZP_05422671.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis T1]
 gi|255975152|ref|ZP_05425738.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis T2]
 gi|256763140|ref|ZP_05503720.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis T3]
 gi|256853808|ref|ZP_05559173.1| late competence protein ComEB [Enterococcus faecalis T8]
 gi|256956725|ref|ZP_05560896.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis DS5]
 gi|256961258|ref|ZP_05565429.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis Merz96]
 gi|256963615|ref|ZP_05567786.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis HIP11704]
 gi|257079679|ref|ZP_05574040.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis JH1]
 gi|257081974|ref|ZP_05576335.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis E1Sol]
 gi|257084526|ref|ZP_05578887.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis Fly1]
 gi|257090637|ref|ZP_05584998.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis CH188]
 gi|257416685|ref|ZP_05593679.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis AR01/DG]
 gi|257419901|ref|ZP_05596895.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis T11]
 gi|257421911|ref|ZP_05598901.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis X98]
 gi|293383542|ref|ZP_06629452.1| ComE operon protein 2 [Enterococcus faecalis R712]
 gi|293387345|ref|ZP_06631901.1| ComE operon protein 2 [Enterococcus faecalis S613]
 gi|294780837|ref|ZP_06746192.1| ComE operon protein 2 [Enterococcus faecalis PC1.1]
 gi|300860396|ref|ZP_07106483.1| ComE operon protein 2 [Enterococcus faecalis TUSoD Ef11]
 gi|307270792|ref|ZP_07552082.1| ComE operon protein 2 [Enterococcus faecalis TX4248]
 gi|307271556|ref|ZP_07552828.1| ComE operon protein 2 [Enterococcus faecalis TX0855]
 gi|307285769|ref|ZP_07565903.1| ComE operon protein 2 [Enterococcus faecalis TX0860]
 gi|307287672|ref|ZP_07567715.1| ComE operon protein 2 [Enterococcus faecalis TX0109]
 gi|307290498|ref|ZP_07570411.1| ComE operon protein 2 [Enterococcus faecalis TX0411]
 gi|312899878|ref|ZP_07759196.1| ComE operon protein 2 [Enterococcus faecalis TX0470]
 gi|312905172|ref|ZP_07764293.1| ComE operon protein 2 [Enterococcus faecalis TX0635]
 gi|312906092|ref|ZP_07765104.1| ComE operon protein 2 [Enterococcus faecalis DAPTO 512]
 gi|312909438|ref|ZP_07768293.1| ComE operon protein 2 [Enterococcus faecalis DAPTO 516]
 gi|312953529|ref|ZP_07772367.1| ComE operon protein 2 [Enterococcus faecalis TX0102]
 gi|29344407|gb|AAO82166.1| comE operon protein 2, putative [Enterococcus faecalis V583]
 gi|227072724|gb|EEI10687.1| competence protein ComEB [Enterococcus faecalis TX0104]
 gi|227176884|gb|EEI57856.1| competence protein ComEB [Enterococcus faecalis HH22]
 gi|229305616|gb|EEN71612.1| competence protein ComEB [Enterococcus faecalis ATCC 29200]
 gi|229309676|gb|EEN75663.1| competence protein ComEB [Enterococcus faecalis TX1322]
 gi|255963103|gb|EET95579.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis T1]
 gi|255968024|gb|EET98646.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis T2]
 gi|256684391|gb|EEU24086.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis T3]
 gi|256710751|gb|EEU25794.1| late competence protein ComEB [Enterococcus faecalis T8]
 gi|256947221|gb|EEU63853.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis DS5]
 gi|256951754|gb|EEU68386.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis Merz96]
 gi|256954111|gb|EEU70743.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis HIP11704]
 gi|256987709|gb|EEU75011.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis JH1]
 gi|256990004|gb|EEU77306.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis E1Sol]
 gi|256992556|gb|EEU79858.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis Fly1]
 gi|256999449|gb|EEU85969.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis CH188]
 gi|257158513|gb|EEU88473.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis ARO1/DG]
 gi|257161729|gb|EEU91689.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis T11]
 gi|257163735|gb|EEU93695.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis X98]
 gi|291079054|gb|EFE16418.1| ComE operon protein 2 [Enterococcus faecalis R712]
 gi|291083243|gb|EFE20206.1| ComE operon protein 2 [Enterococcus faecalis S613]
 gi|294452082|gb|EFG20529.1| ComE operon protein 2 [Enterococcus faecalis PC1.1]
 gi|295113494|emb|CBL32131.1| ComE operon protein 2 [Enterococcus sp. 7L76]
 gi|300849435|gb|EFK77185.1| ComE operon protein 2 [Enterococcus faecalis TUSoD Ef11]
 gi|306498445|gb|EFM67949.1| ComE operon protein 2 [Enterococcus faecalis TX0411]
 gi|306501410|gb|EFM70713.1| ComE operon protein 2 [Enterococcus faecalis TX0109]
 gi|306502530|gb|EFM71797.1| ComE operon protein 2 [Enterococcus faecalis TX0860]
 gi|306511828|gb|EFM80826.1| ComE operon protein 2 [Enterococcus faecalis TX0855]
 gi|306512906|gb|EFM81548.1| ComE operon protein 2 [Enterococcus faecalis TX4248]
 gi|310627738|gb|EFQ11021.1| ComE operon protein 2 [Enterococcus faecalis DAPTO 512]
 gi|310628541|gb|EFQ11824.1| ComE operon protein 2 [Enterococcus faecalis TX0102]
 gi|310631562|gb|EFQ14845.1| ComE operon protein 2 [Enterococcus faecalis TX0635]
 gi|311290111|gb|EFQ68667.1| ComE operon protein 2 [Enterococcus faecalis DAPTO 516]
 gi|311292874|gb|EFQ71430.1| ComE operon protein 2 [Enterococcus faecalis TX0470]
 gi|315030173|gb|EFT42105.1| ComE operon protein 2 [Enterococcus faecalis TX4000]
 gi|315032942|gb|EFT44874.1| ComE operon protein 2 [Enterococcus faecalis TX0017]
 gi|315035754|gb|EFT47686.1| ComE operon protein 2 [Enterococcus faecalis TX0027]
 gi|315144858|gb|EFT88874.1| ComE operon protein 2 [Enterococcus faecalis TX2141]
 gi|315146725|gb|EFT90741.1| ComE operon protein 2 [Enterococcus faecalis TX4244]
 gi|315150113|gb|EFT94129.1| ComE operon protein 2 [Enterococcus faecalis TX0012]
 gi|315152019|gb|EFT96035.1| ComE operon protein 2 [Enterococcus faecalis TX0031]
 gi|315155382|gb|EFT99398.1| ComE operon protein 2 [Enterococcus faecalis TX0043]
 gi|315159042|gb|EFU03059.1| ComE operon protein 2 [Enterococcus faecalis TX0312]
 gi|315161635|gb|EFU05652.1| ComE operon protein 2 [Enterococcus faecalis TX0645]
 gi|315164895|gb|EFU08912.1| ComE operon protein 2 [Enterococcus faecalis TX1302]
 gi|315166356|gb|EFU10373.1| ComE operon protein 2 [Enterococcus faecalis TX1341]
 gi|315170253|gb|EFU14270.1| ComE operon protein 2 [Enterococcus faecalis TX1342]
 gi|315574319|gb|EFU86510.1| ComE operon protein 2 [Enterococcus faecalis TX0309B]
 gi|315579112|gb|EFU91303.1| ComE operon protein 2 [Enterococcus faecalis TX0630]
 gi|315580206|gb|EFU92397.1| ComE operon protein 2 [Enterococcus faecalis TX0309A]
 gi|323481437|gb|ADX80876.1| comE operon protein 2 [Enterococcus faecalis 62]
 gi|327535732|gb|AEA94566.1| ComE operon protein 2 [Enterococcus faecalis OG1RF]
 gi|329572337|gb|EGG53994.1| ComE operon protein 2 [Enterococcus faecalis TX1467]
          Length = 167

 Score = 67.6 bits (165), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 24/90 (26%), Positives = 35/90 (38%), Gaps = 17/90 (18%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKD---------------VTAHAEILAIRMGCRILSQEI 70
           VGA  V + +II+   N +                     T HAE+ AI    +      
Sbjct: 28  VGATIVRDKRIIAGGYNGSVSGGTHCIDEGCYVVDNHCVRTIHAEMNAILQCAKFGVPT- 86

Query: 71  LPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
               ++YVT  PC  C   I  A I+++YY
Sbjct: 87  -EGAEIYVTHFPCLQCTKMILQAGIKKIYY 115


>gi|152976756|ref|YP_001376273.1| ComE operon protein 2 [Bacillus cereus subsp. cytotoxis NVH 391-98]
 gi|152025508|gb|ABS23278.1| ComE operon protein 2 [Bacillus cytotoxicus NVH 391-98]
          Length = 185

 Score = 67.6 bits (165), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 24/91 (26%), Positives = 37/91 (40%), Gaps = 17/91 (18%)

Query: 26  VGAVAVLNNKIISRAGNRNRELK-----------D----VTAHAEILAIRMGCRILSQEI 70
           VGA  V + +II+   N + +             D     T HAE+ A+    +   +  
Sbjct: 28  VGATIVRDKRIIAGGYNGSIKGGVHCIDEGCYVIDNHCVRTIHAEMNALLQCAKFGVKT- 86

Query: 71  LPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
               ++YVT  PC  C  AI  + I  +YY 
Sbjct: 87  -EGAEIYVTHFPCLQCCKAIIQSGITAVYYA 116


>gi|228960596|ref|ZP_04122243.1| ComE operon protein 2 [Bacillus thuringiensis serovar pakistani
           str. T13001]
 gi|229048033|ref|ZP_04193608.1| ComE operon protein 2 [Bacillus cereus AH676]
 gi|229111800|ref|ZP_04241346.1| ComE operon protein 2 [Bacillus cereus Rock1-15]
 gi|229146898|ref|ZP_04275262.1| ComE operon protein 2 [Bacillus cereus BDRD-ST24]
 gi|228636497|gb|EEK92963.1| ComE operon protein 2 [Bacillus cereus BDRD-ST24]
 gi|228671556|gb|EEL26854.1| ComE operon protein 2 [Bacillus cereus Rock1-15]
 gi|228723277|gb|EEL74647.1| ComE operon protein 2 [Bacillus cereus AH676]
 gi|228799075|gb|EEM46045.1| ComE operon protein 2 [Bacillus thuringiensis serovar pakistani
           str. T13001]
          Length = 188

 Score = 67.6 bits (165), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 25/91 (27%), Positives = 39/91 (42%), Gaps = 17/91 (18%)

Query: 26  VGAVAVLNNKIISRAGNRNRELK-----DV----------TAHAEILAIRMGCRILSQEI 70
           VGA  V + +II+   N + +       D           T HAE+ A+    +  ++  
Sbjct: 31  VGATIVRDKRIIAGGYNGSIKGGVHCIDDGCYVIDNHCVRTIHAEMNALLQCAKFGAKT- 89

Query: 71  LPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
             E ++YVT  PC  C  AI  + I  +YY 
Sbjct: 90  -EEAEIYVTHFPCLQCCKAIIQSGITAVYYA 119


>gi|326942109|gb|AEA18005.1| ComE operon protein 2 [Bacillus thuringiensis serovar chinensis
           CT-43]
          Length = 185

 Score = 67.6 bits (165), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 25/91 (27%), Positives = 39/91 (42%), Gaps = 17/91 (18%)

Query: 26  VGAVAVLNNKIISRAGNRNRELK-----DV----------TAHAEILAIRMGCRILSQEI 70
           VGA  V + +II+   N + +       D           T HAE+ A+    +  ++  
Sbjct: 28  VGATIVRDKRIIAGGYNGSIKGGVHCIDDGCYVIDNHCVRTIHAEMNALLQCAKFGAKT- 86

Query: 71  LPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
             E ++YVT  PC  C  AI  + I  +YY 
Sbjct: 87  -EEAEIYVTHFPCLQCCKAIIQSGITAVYYA 116


>gi|302868567|ref|YP_003837204.1| riboflavin biosynthesis protein RibD [Micromonospora aurantiaca
           ATCC 27029]
 gi|302571426|gb|ADL47628.1| riboflavin biosynthesis protein RibD [Micromonospora aurantiaca
           ATCC 27029]
          Length = 295

 Score = 67.6 bits (165), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 25/138 (18%), Positives = 40/138 (28%), Gaps = 23/138 (16%)

Query: 8   MSCALEEAQNAALRN--EIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           M  A+  +           PVG V +  +   +    +R +      AHAE+ A+     
Sbjct: 10  MRQAIILSSLGLGTTSPNPPVGCVILDRHGATVGAGYHRRKGE----AHAEVNALSAAGP 65

Query: 65  ILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
                        VTLEPC        C   +  A I R+     +P   G         
Sbjct: 66  AA-----LGGTAVVTLEPCNHVGVTPACRQELIDAGIARVVISLIDPTSRGEGGAAVLTA 120

Query: 119 LATCHHSPEIYPGISEQR 136
                H  ++   +    
Sbjct: 121 -----HGIDVETNVLPDE 133


>gi|225010991|ref|ZP_03701457.1| CMP/dCMP deaminase zinc-binding [Flavobacteria bacterium MS024-3C]
 gi|225004898|gb|EEG42854.1| CMP/dCMP deaminase zinc-binding [Flavobacteria bacterium MS024-3C]
          Length = 146

 Score = 67.6 bits (165), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 31/129 (24%), Positives = 47/129 (36%), Gaps = 19/129 (14%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRN-----RELKDVTA---- 52
           K    ++  A E  + +  + +  VGA+ V +  IIS   N          +D T     
Sbjct: 9   KYDQAYLRMAAEWGKLSYCKRKQ-VGAIVVKDRMIISDGYNGTPSGFENFCEDETGYTKW 67

Query: 53  ---HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109
              HAE  A+                LY+TL PC  C+  I  + I+R+ Y     K   
Sbjct: 68  YVLHAEANALSKVAASTQSS--EGATLYITLSPCKECSKLIHQSGIKRVVYA----KAYR 121

Query: 110 IENGTQFYT 118
             +G  F  
Sbjct: 122 DSSGIDFLA 130


>gi|320158842|ref|YP_004191220.1| DCMP deaminase [Vibrio vulnificus MO6-24/O]
 gi|319934154|gb|ADV89017.1| DCMP deaminase [Vibrio vulnificus MO6-24/O]
          Length = 152

 Score = 67.2 bits (164), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 26/86 (30%), Positives = 34/86 (39%), Gaps = 18/86 (20%)

Query: 26  VGAVAVLNNKIISRAGN-------------RNRELKDVTAHAEILAIRMGCRILSQEILP 72
           VGAV    N+I+S   N                     T HAE  AI     + S+  L 
Sbjct: 27  VGAVITKQNRIVSVGFNGYPHGVSDSVDTDERELKYLKTLHAEENAI-----LFSKRDLD 81

Query: 73  EVDLYVTLEPCTMCAAAISLARIRRL 98
             +++VT  PC  CAA I    I R+
Sbjct: 82  GCEIWVTHFPCPNCAAKIIQTGISRV 107


>gi|312867602|ref|ZP_07727808.1| putative ComE operon protein 2 [Streptococcus parasanguinis F0405]
 gi|311096665|gb|EFQ54903.1| putative ComE operon protein 2 [Streptococcus parasanguinis F0405]
          Length = 155

 Score = 67.2 bits (164), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 29/112 (25%), Positives = 40/112 (35%), Gaps = 19/112 (16%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKD-------------- 49
              F + AL  +  A       VGAV V +NK+I+   N +    D              
Sbjct: 9   DEYFAAQALLISNRATCNRAK-VGAVLVKDNKVIATGYNGSVSGTDHCLEDGCLMVEGHC 67

Query: 50  -VTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
             T HAE+ AI  G      +       YVT  PC  C   +     +R+ Y
Sbjct: 68  VRTIHAEVNAILQGAERGIPK---GFTAYVTHFPCLNCTKQLLQVGCKRVVY 116


>gi|296504819|ref|YP_003666519.1| ComE operon protein 2 [Bacillus thuringiensis BMB171]
 gi|296325871|gb|ADH08799.1| ComE operon protein 2 [Bacillus thuringiensis BMB171]
          Length = 185

 Score = 67.2 bits (164), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 25/91 (27%), Positives = 39/91 (42%), Gaps = 17/91 (18%)

Query: 26  VGAVAVLNNKIISRAGNRNRELK-----DV----------TAHAEILAIRMGCRILSQEI 70
           VGA  V + +II+   N + +       D           T HAE+ A+    +  ++  
Sbjct: 28  VGATIVRDKRIIAGGYNGSIKGGVHCIDDGCYVIDNHCVRTIHAEMNALLQCAKFGAKT- 86

Query: 71  LPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
             E ++YVT  PC  C  AI  + I  +YY 
Sbjct: 87  -EEAEIYVTHFPCLQCCKAIIQSGITAVYYA 116


>gi|118474836|ref|YP_892622.1| riboflavin biosynthesis protein RibD [Campylobacter fetus subsp.
           fetus 82-40]
 gi|118414062|gb|ABK82482.1| riboflavin biosynthesis protein RibD [Campylobacter fetus subsp.
           fetus 82-40]
          Length = 336

 Score = 67.2 bits (164), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 31/174 (17%), Positives = 58/174 (33%), Gaps = 42/174 (24%)

Query: 4   GNVFMSCALEEAQNA--ALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIR 60
              +M+ A+ +A            VG V    N +I+S   N + +      HAE+ AI+
Sbjct: 3   NEYYMNIAINKAWEFQFLTYPNPAVGCVITGKNGEILSI--NAHEKAGMP--HAELNAIK 58

Query: 61  MGCRI------------------------LSQEILPEVDLYVTLEPC------TMCAAAI 90
               +                            +L     YVTLEPC        CA  +
Sbjct: 59  YALEMKNPAFKQDFDEIKDTNELYNFIMQNHSNLLNGSTAYVTLEPCSHQGRTPPCANLL 118

Query: 91  SLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
                +++  GA +        G Q    +          G+ ++++ ++++ F
Sbjct: 119 KELGFKQVIIGAIDSSENAKG-GEQILKNSGIKTKI----GVCKEKADELLEPF 167


>gi|257087478|ref|ZP_05581839.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis D6]
 gi|307277118|ref|ZP_07558222.1| ComE operon protein 2 [Enterococcus faecalis TX2134]
 gi|256995508|gb|EEU82810.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis D6]
 gi|306506048|gb|EFM75214.1| ComE operon protein 2 [Enterococcus faecalis TX2134]
 gi|315025365|gb|EFT37297.1| ComE operon protein 2 [Enterococcus faecalis TX2137]
          Length = 167

 Score = 67.2 bits (164), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 24/90 (26%), Positives = 35/90 (38%), Gaps = 17/90 (18%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKD---------------VTAHAEILAIRMGCRILSQEI 70
           VGA  V + +II+   N +                     T HAE+ AI    +      
Sbjct: 28  VGATIVRDKRIIAGGYNGSVSGGTHCIDEGCYVVDNHCVRTIHAEMNAILQCAKFGVPT- 86

Query: 71  LPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
               ++YVT  PC  C   I  A I+++YY
Sbjct: 87  -EGAEIYVTHFPCLQCTKMILQAGIKKIYY 115


>gi|27366964|ref|NP_762491.1| Deoxycytidylate deaminase [Vibrio vulnificus CMCP6]
 gi|27358531|gb|AAO07481.1|AE016809_243 Deoxycytidylate deaminase [Vibrio vulnificus CMCP6]
          Length = 152

 Score = 67.2 bits (164), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 26/86 (30%), Positives = 34/86 (39%), Gaps = 18/86 (20%)

Query: 26  VGAVAVLNNKIISRAGN-------------RNRELKDVTAHAEILAIRMGCRILSQEILP 72
           VGAV    N+I+S   N                     T HAE  AI     + S+  L 
Sbjct: 27  VGAVITKQNRIVSVGFNGYPHGVSDSVDTDERELKYLKTLHAEENAI-----LFSKRDLD 81

Query: 73  EVDLYVTLEPCTMCAAAISLARIRRL 98
             +++VT  PC  CAA I    I R+
Sbjct: 82  GCEIWVTHFPCPNCAAKIIQTGISRV 107


>gi|322387410|ref|ZP_08061020.1| cytidine and deoxycytidylate deaminase [Streptococcus infantis ATCC
           700779]
 gi|321141939|gb|EFX37434.1| cytidine and deoxycytidylate deaminase [Streptococcus infantis ATCC
           700779]
          Length = 160

 Score = 67.2 bits (164), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 31/117 (26%), Positives = 40/117 (34%), Gaps = 29/117 (24%)

Query: 4   GNVFMSCALEEA-----QNAALRNEIPVGAVAVLNNKIISRAGNRNRE------LKDV-- 50
              F + AL  A     + A       VGAV V +NK+IS   N +          D   
Sbjct: 14  DEYFAAQALLIANRSTCKRAK------VGAVLVKDNKVISTGYNGSVSGTEHCIDHDCLV 67

Query: 51  -------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
                  T HAE+ AI  G      +       YVT  PC  C   +      R+ Y
Sbjct: 68  IEGHCVRTLHAEVNAILQGSERGVPK---GFTAYVTHFPCLNCTKQLLQVGCERVVY 121


>gi|256616995|ref|ZP_05473841.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis ATCC
           4200]
 gi|256596522|gb|EEU15698.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis ATCC
           4200]
          Length = 151

 Score = 67.2 bits (164), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 24/90 (26%), Positives = 35/90 (38%), Gaps = 17/90 (18%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKD---------------VTAHAEILAIRMGCRILSQEI 70
           VGA  V + +II+   N +                     T HAE+ AI    +      
Sbjct: 28  VGATIVRDKRIIAGGYNGSVSGGTHCIDEGCYVVDNHCVRTIHAEMNAILQCAKFGVPT- 86

Query: 71  LPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
               ++YVT  PC  C   I  A I+++YY
Sbjct: 87  -EGAEIYVTHFPCLQCTKMILQAGIKKIYY 115


>gi|162457300|ref|YP_001619667.1| dCMP deaminase [Sorangium cellulosum 'So ce 56']
 gi|161167882|emb|CAN99187.1| dCMP deaminase [Sorangium cellulosum 'So ce 56']
          Length = 135

 Score = 67.2 bits (164), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 29/109 (26%), Positives = 41/109 (37%), Gaps = 18/109 (16%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRE---LKD------------VTA 52
           M  A   A  A    +  VGAV V +  I++   N +       D             T 
Sbjct: 1   MRIAEVVASRATCDRKH-VGAVIVRDKSILATGYNGSIRGLPHCDEDGHLIEDGHCVRTI 59

Query: 53  HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
           HAE  AI    R  +   +    +YVT  PC  C   I+ A + R+ +G
Sbjct: 60  HAEANAIIQAAR--NGVRIDGATVYVTASPCWGCFKMIANAGLSRVVFG 106


>gi|301756412|ref|XP_002914055.1| PREDICTED: deoxycytidylate deaminase-like [Ailuropoda melanoleuca]
          Length = 178

 Score = 67.2 bits (164), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 32/116 (27%), Positives = 42/116 (36%), Gaps = 25/116 (21%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGN-RNRELKD------VTA---- 52
             FM+ A   AQ +   N   VGA  V   NKI+    N       D       TA    
Sbjct: 17  EYFMAVAFLSAQRSKDPNSQ-VGACIVNAENKIVGIGYNGMPNGCSDDLLPWRRTAESKL 75

Query: 53  --------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
                   HAE+ AI       +   +    +YV L PC  CA  I  A I+ + +
Sbjct: 76  DTKYPYVCHAELNAIMN----KNSADVKGCTMYVALFPCNECAKLIIQAGIKEVIF 127


>gi|109076283|ref|XP_001092119.1| PREDICTED: deoxycytidylate deaminase isoform 3 [Macaca mulatta]
 gi|297293743|ref|XP_002804315.1| PREDICTED: deoxycytidylate deaminase [Macaca mulatta]
          Length = 178

 Score = 67.2 bits (164), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 32/116 (27%), Positives = 42/116 (36%), Gaps = 25/116 (21%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGN-RNRELKD------VTA---- 52
             FM+ A   AQ +   N   VGA  V   NKI+    N       D       TA    
Sbjct: 17  EYFMAVAFLSAQRSKDPNSQ-VGACIVNSENKIVGIGYNGMPNGCSDDLLPWSRTAENKL 75

Query: 53  --------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
                   HAE+ AI       +   +    +YV L PC  CA  I  A I+ + +
Sbjct: 76  DTKYPYVCHAELNAIMN----KNSTDVKGCSMYVALFPCNECAKLIIQAGIKEVIF 127


>gi|327439586|dbj|BAK15951.1| deoxycytidylate deaminase [Solibacillus silvestris StLB046]
          Length = 191

 Score = 67.2 bits (164), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 29/116 (25%), Positives = 41/116 (35%), Gaps = 18/116 (15%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKD----------- 49
           +     FM+ +   A  +     + VGA  V   +II+   N +    +           
Sbjct: 4   ITWDQFFMAQSHLLALRSTCSR-LAVGATIVREKRIIAGGYNGSISGDEHCIEEGCYVVD 62

Query: 50  ----VTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
                T HAE  A+   C           DLYVT  PC  C   I  A I+ +YY 
Sbjct: 63  NHCVRTVHAETNALLQ-CAKYGTPA-NGADLYVTHFPCLPCTKTIIQAGIKNVYYA 116


>gi|325479743|gb|EGC82833.1| putative ComE operon protein 2 [Anaerococcus prevotii
           ACS-065-V-Col13]
          Length = 146

 Score = 67.2 bits (164), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 32/126 (25%), Positives = 46/126 (36%), Gaps = 34/126 (26%)

Query: 1   MKKG-----NVFMSCALEEA-----QNAALRNEIPVGAVAV-LNNKIISRAGNRNR---- 45
           M K        FM  A   A       A       VG V V   N+I++   N +     
Sbjct: 1   MAKDRLSWQEYFMKLAKNVAMRGTCDRAY------VGCVIVNEENRIVTTGYNGSISGNP 54

Query: 46  -------ELKD----VTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLAR 94
                   ++D     T HAE+ AI    +      L +   YVT  PC  C  ++  A 
Sbjct: 55  HCDEVGHTMRDGHCIATIHAEMNAILYCAKEGIA--LKDTICYVTHFPCLNCTKSLIQAG 112

Query: 95  IRRLYY 100
           I+++YY
Sbjct: 113 IKKIYY 118


>gi|229129607|ref|ZP_04258575.1| ComE operon protein 2 [Bacillus cereus BDRD-Cer4]
 gi|229152530|ref|ZP_04280720.1| ComE operon protein 2 [Bacillus cereus m1550]
 gi|228630896|gb|EEK87535.1| ComE operon protein 2 [Bacillus cereus m1550]
 gi|228653724|gb|EEL09594.1| ComE operon protein 2 [Bacillus cereus BDRD-Cer4]
          Length = 188

 Score = 67.2 bits (164), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 25/91 (27%), Positives = 39/91 (42%), Gaps = 17/91 (18%)

Query: 26  VGAVAVLNNKIISRAGNRNRELK-----DV----------TAHAEILAIRMGCRILSQEI 70
           VGA  V + +II+   N + +       D           T HAE+ A+    +  ++  
Sbjct: 31  VGATIVRDKRIIAGGYNGSIKGGVHCIDDGCYVIDNHCVRTIHAEMNALLQCAKFGAKT- 89

Query: 71  LPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
             E ++YVT  PC  C  AI  + I  +YY 
Sbjct: 90  -EEAEIYVTHFPCLQCCKAIIQSGITAVYYA 119


>gi|50365203|ref|YP_053628.1| deoxycytidylate deaminase [Mesoplasma florum L1]
 gi|50363759|gb|AAT75744.1| deoxycytidylate deaminase [Mesoplasma florum L1]
          Length = 157

 Score = 67.2 bits (164), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 41/128 (32%), Positives = 53/128 (41%), Gaps = 37/128 (28%)

Query: 1   MKKGNV------FMSCALEEAQNAALRNEIP---VGAVAVLN-NKIISRAGN-------- 42
           MK+ N       FM+ A   A  +      P   VGA+ V N N+IIS   N        
Sbjct: 1   MKRENFLNWEQFFMTVAKVCAMRSKD----PSTQVGAILVNNLNQIISTGYNGFPRGVND 56

Query: 43  ------RNRELKDV----TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISL 92
                 R  E  D      AHAE+ AI        +  L + D+YVTL PC  C   I  
Sbjct: 57  DEFPWTREGEWIDTKYPYVAHAELNAIVSA-----RTNLTDSDVYVTLFPCNECTKIIIQ 111

Query: 93  ARIRRLYY 100
           A I+++YY
Sbjct: 112 AGIKKVYY 119


>gi|291460249|ref|ZP_06599639.1| putative deoxycytidylate deaminase [Oribacterium sp. oral taxon 078
           str. F0262]
 gi|291417196|gb|EFE90915.1| putative deoxycytidylate deaminase [Oribacterium sp. oral taxon 078
           str. F0262]
          Length = 166

 Score = 67.2 bits (164), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 35/125 (28%), Positives = 45/125 (36%), Gaps = 33/125 (26%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAV-LNNKIISRAGN-------------- 42
           +     FM  A   A+ +      P   VGA  V  +NKI+S   N              
Sbjct: 11  ISWEEYFMGVAEMSARRSKD----PSTQVGACIVSRDNKILSMGYNGFPRGCSDDLFPWT 66

Query: 43  RNRELKDV-------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARI 95
           +     D        + HAE+ AI           L    LYVTL PC  CA A+  A I
Sbjct: 67  KIHVSDDPYNAKYFYSTHAELNAILN----YRGGSLEGAKLYVTLFPCNECAKALIQAGI 122

Query: 96  RRLYY 100
           + L Y
Sbjct: 123 KTLVY 127


>gi|227486316|ref|ZP_03916632.1| competence protein ComEB [Anaerococcus lactolyticus ATCC 51172]
 gi|227235727|gb|EEI85742.1| competence protein ComEB [Anaerococcus lactolyticus ATCC 51172]
          Length = 147

 Score = 67.2 bits (164), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 29/118 (24%), Positives = 41/118 (34%), Gaps = 29/118 (24%)

Query: 4   GNVFMSCALEEA-----QNAALRNEIPVGAVAV-LNNKIISRAGNRN---RELKD----- 49
              FM  A   A       A       VG V V   N+I+S   N +       D     
Sbjct: 9   DEYFMRLAETVAMRGTCDRAY------VGCVLVNSENRIVSTGYNGSIKGNAHCDEIGHT 62

Query: 50  -------VTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
                   T HAE+ A+    +      +     YVT  PC  C  ++  A I+++YY
Sbjct: 63  MRDGHCIATIHAEMNALLYCAKEGIA--VNNCICYVTHFPCLNCTKSLIQAGIKKIYY 118


>gi|302390580|ref|YP_003826401.1| CMP/dCMP deaminase zinc-binding protein [Thermosediminibacter
           oceani DSM 16646]
 gi|302201208|gb|ADL08778.1| CMP/dCMP deaminase zinc-binding protein [Thermosediminibacter
           oceani DSM 16646]
          Length = 152

 Score = 67.2 bits (164), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 29/120 (24%), Positives = 45/120 (37%), Gaps = 26/120 (21%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGN--------------RNRELKD 49
            + FM  A   A+ +       VGAV VL  +I++   N                 +L+ 
Sbjct: 10  DDYFMEIAGVVAKRSTCLR-RSVGAVVVLEKRILTTGYNGAPTGLSHCGDVGCLREKLRI 68

Query: 50  VTA---------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
                       HAE  AI       +   +    +YVT +PC +CA  +  A IRR+ +
Sbjct: 69  PPGERHELCRGLHAEQNAIIQAAIWGTS--IKGATIYVTHQPCALCAKMLINAGIRRIVF 126


>gi|229098798|ref|ZP_04229736.1| ComE operon protein 2 [Bacillus cereus Rock3-29]
 gi|228684642|gb|EEL38582.1| ComE operon protein 2 [Bacillus cereus Rock3-29]
          Length = 188

 Score = 67.2 bits (164), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 25/91 (27%), Positives = 39/91 (42%), Gaps = 17/91 (18%)

Query: 26  VGAVAVLNNKIISRAGNRNRELK-----DV----------TAHAEILAIRMGCRILSQEI 70
           VGA  V + +II+   N + +       D           T HAE+ A+    +  ++  
Sbjct: 31  VGATIVRDKRIIAGGYNGSIKGGVHCIDDGCYVIDNHCVRTIHAEMNALLQCAKFGAKT- 89

Query: 71  LPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
             E ++YVT  PC  C  AI  + I  +YY 
Sbjct: 90  -EEAEIYVTHFPCLQCCKAIIQSGITAVYYA 119


>gi|304320114|ref|YP_003853757.1| diaminohydroxyphosphoriboxylaminopyrimidine deaminase
           +5-amino-6-(5-phosphoribosylamino)uracil reductase
           (RibD) [Parvularcula bermudensis HTCC2503]
 gi|303299017|gb|ADM08616.1| diaminohydroxyphosphoriboxylaminopyrimidine deaminase
           +5-amino-6-(5-phosphoribosylamino)uracil reductase
           (RibD) [Parvularcula bermudensis HTCC2503]
          Length = 366

 Score = 67.2 bits (164), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 26/117 (22%), Positives = 38/117 (32%), Gaps = 17/117 (14%)

Query: 3   KGNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
             ++ M  A    +  A        VG V V   +I+    +  R   D   HAEI    
Sbjct: 4   TDDICMDRAAALGELGAGFTAPNPMVGCVLVKGGQIVGEGYH-PRPGAD---HAEIA--- 56

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIE 111
                 +         YVTLEPC        C  A+  A +  + Y  ++P      
Sbjct: 57  --ALKAAGAEARGAVAYVTLEPCNHYGATPPCTKALIEAGVAEVVYAVADPNPLASG 111


>gi|322420509|ref|YP_004199732.1| dCMP deaminase [Geobacter sp. M18]
 gi|320126896|gb|ADW14456.1| dCMP deaminase [Geobacter sp. M18]
          Length = 151

 Score = 67.2 bits (164), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 22/104 (21%), Positives = 37/104 (35%), Gaps = 27/104 (25%)

Query: 26  VGAVAVLNNKIISRAGN--------------RNRELKDVTA---------HAEILAIRMG 62
           VGAV V +  I++   N                 ++   +          HAE  AI   
Sbjct: 28  VGAVLVKDKNILATGYNGAPSGTSHCLDIGCLREKMGIPSGERHELCRGLHAEQNAIIQA 87

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY--GASN 104
            +  +   +    LY    PC +C+  +  A I+R+ Y  G  +
Sbjct: 88  AKHGTS--IEGATLYCNTMPCIICSKMVINAGIKRVVYLSGYPD 129


>gi|228910163|ref|ZP_04073982.1| ComE operon protein 2 [Bacillus thuringiensis IBL 200]
 gi|228849446|gb|EEM94281.1| ComE operon protein 2 [Bacillus thuringiensis IBL 200]
          Length = 188

 Score = 67.2 bits (164), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 25/91 (27%), Positives = 39/91 (42%), Gaps = 17/91 (18%)

Query: 26  VGAVAVLNNKIISRAGNRNRELK-----DV----------TAHAEILAIRMGCRILSQEI 70
           VGA  V + +II+   N + +       D           T HAE+ A+    +  ++  
Sbjct: 31  VGATIVRDKRIIAGGYNGSIKGGVHCIDDGCYVIDNHCVRTIHAEMNALLQCAKFGAKT- 89

Query: 71  LPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
             E ++YVT  PC  C  AI  + I  +YY 
Sbjct: 90  -EEAEIYVTHFPCLQCCKAIIQSGITAVYYA 119


>gi|149191235|ref|ZP_01869491.1| deoxycytidylate deaminase [Vibrio shilonii AK1]
 gi|148834905|gb|EDL51886.1| deoxycytidylate deaminase [Vibrio shilonii AK1]
          Length = 147

 Score = 67.2 bits (164), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 26/86 (30%), Positives = 32/86 (37%), Gaps = 18/86 (20%)

Query: 26  VGAVAVLNNKIISRAGN-------------RNRELKDVTAHAEILAIRMGCRILSQEILP 72
           VGAV   NN+I+S   N                     T HAE  AI    R      L 
Sbjct: 27  VGAVITKNNRIVSVGFNGYPHGISDSAEVDERETKYLKTLHAEENAILFAKR-----DLD 81

Query: 73  EVDLYVTLEPCTMCAAAISLARIRRL 98
             +++VT  PC  CAA I    I  +
Sbjct: 82  GCEIWVTHFPCPNCAAKIIQTGISVV 107


>gi|218234584|ref|YP_002369136.1| ComE operon protein 2 [Bacillus cereus B4264]
 gi|218162541|gb|ACK62533.1| ComE operon protein 2 [Bacillus cereus B4264]
          Length = 185

 Score = 67.2 bits (164), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 25/91 (27%), Positives = 39/91 (42%), Gaps = 17/91 (18%)

Query: 26  VGAVAVLNNKIISRAGNRNRELK-----DV----------TAHAEILAIRMGCRILSQEI 70
           VGA  V + +II+   N + +       D           T HAE+ A+    +  ++  
Sbjct: 28  VGATIVRDKRIIAGGYNGSIKGGVHCIDDGCYVIDNHCVRTIHAEMNALLQCAKFGAKT- 86

Query: 71  LPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
             E ++YVT  PC  C  AI  + I  +YY 
Sbjct: 87  -EEAEIYVTHFPCLQCCKAIIQSGITAVYYA 116


>gi|238502305|ref|XP_002382386.1| conserved hypothetical protein [Aspergillus flavus NRRL3357]
 gi|220691196|gb|EED47544.1| conserved hypothetical protein [Aspergillus flavus NRRL3357]
          Length = 164

 Score = 67.2 bits (164), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 28/117 (23%), Positives = 40/117 (34%), Gaps = 19/117 (16%)

Query: 25  PVGAVAVLNNKIISRAGNRNRELKDVT----AHAEILAIRMGCRILSQEILPEVDLYVTL 80
           P  A+ +  +       N    +  ++     HAE    R      +++ L E     T 
Sbjct: 31  PFAALLLAPD-------NTTVLMSSLSLSHVRHAEAELARNAADNYARDYLAETTFISTW 83

Query: 81  EPCTMCAAAISLARIRRLYYGASNPKGGGI---ENGTQFYTLATC-----HHSPEIY 129
           EPC MCA  I  A I RL Y AS     G+    N         C     +   E+ 
Sbjct: 84  EPCAMCAGTIYWANIGRLVYLASEKALQGVIGEGNIENLTLDLPCRTVFANGQTEVE 140


>gi|163790315|ref|ZP_02184747.1| comE operon protein 2, putative [Carnobacterium sp. AT7]
 gi|159874386|gb|EDP68458.1| comE operon protein 2, putative [Carnobacterium sp. AT7]
          Length = 171

 Score = 67.2 bits (164), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 31/141 (21%), Positives = 50/141 (35%), Gaps = 37/141 (26%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKDV----------------TAHAEILAIRMGCRILSQE 69
           VGA  V   +II+   N +    DV                T HAE+ AI    +  +Q 
Sbjct: 29  VGATIVREKRIIAGGYNGSVS-GDVHCIDEGCYVVDGHCLRTIHAEMNAILQCAKFGAQT 87

Query: 70  ILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIY 129
                ++YVT  PC  C   I  A I ++YY               ++         E  
Sbjct: 88  --QGAEIYVTHFPCLQCTKMIIQAGITKIYY------------LEDYHNDPYALKLIE-Q 132

Query: 130 PGISEQRSR--QIIQDFFKER 148
             +   + +   + +DFF++ 
Sbjct: 133 AHV---QCQKVALPKDFFQQL 150


>gi|163816077|ref|ZP_02207447.1| hypothetical protein COPEUT_02257 [Coprococcus eutactus ATCC 27759]
 gi|158448887|gb|EDP25882.1| hypothetical protein COPEUT_02257 [Coprococcus eutactus ATCC 27759]
          Length = 159

 Score = 67.2 bits (164), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 32/122 (26%), Positives = 44/122 (36%), Gaps = 30/122 (24%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAV-LNNKIISRAGNRNRELKDVTA---- 52
           +     FM  A+  A+ +      P   VGA  V  NN+I+S   N      D  A    
Sbjct: 7   ISWDQYFMGIAMMSAERSKD----PSTQVGACIVDKNNRILSMGYNGMPAGCDDDAMPWG 62

Query: 53  --------------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98
                         HAE+ +I           L +  +Y TL PC  CA AI    I+ +
Sbjct: 63  KVGNPLDNKYFYVCHAELNSILN----YRGGNLKDAIIYSTLFPCNECAKAIIQCGIKEV 118

Query: 99  YY 100
            Y
Sbjct: 119 VY 120


>gi|313115327|ref|ZP_07800802.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Faecalibacterium cf. prausnitzii KLE1255]
 gi|310622358|gb|EFQ05838.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Faecalibacterium cf. prausnitzii KLE1255]
          Length = 159

 Score = 67.2 bits (164), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 34/119 (28%), Positives = 41/119 (34%), Gaps = 24/119 (20%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGN--------------RNR 45
           +     FM  AL  A  +   N   VGA  V   NKI+S   N              R  
Sbjct: 7   INWDEYFMGIALLTAMRSKDPNSQ-VGACIVSSENKILSLGYNGMPIGCSDDEMPWEREG 65

Query: 46  ELKDV----TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
              D       HAE+ AI           L    +YVTL PC  C  AI  + I  + Y
Sbjct: 66  APLDTKYMYVCHAELNAILNSAHN----NLKGARVYVTLFPCNECTKAIIQSGIAEVVY 120


>gi|262067377|ref|ZP_06026989.1| putative deoxycytidylate deaminase [Fusobacterium periodonticum
           ATCC 33693]
 gi|291378940|gb|EFE86458.1| putative deoxycytidylate deaminase [Fusobacterium periodonticum
           ATCC 33693]
          Length = 160

 Score = 67.2 bits (164), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 31/122 (25%), Positives = 46/122 (37%), Gaps = 31/122 (25%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNK-IISRAGN-------------R 43
           +   + FM  AL  +  +      P   VGA  V  +K I+    N              
Sbjct: 6   IDWDSYFMGIALLSSMRSKD----PNTQVGACIVNEDKRIVGVGYNGLPKGCEDTDFPWE 61

Query: 44  NR----ELKDV-TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98
                 E K     HAE+ AI     + S + L +  +YV L PC  C+ AI  + I+ +
Sbjct: 62  REGDFLETKYPYVCHAELNAI-----LNSIKSLKDCVIYVALFPCNECSKAIIQSGIKEI 116

Query: 99  YY 100
            Y
Sbjct: 117 VY 118


>gi|237738775|ref|ZP_04569256.1| deoxycytidylate deaminase [Fusobacterium sp. 2_1_31]
 gi|229423878|gb|EEO38925.1| deoxycytidylate deaminase [Fusobacterium sp. 2_1_31]
          Length = 160

 Score = 67.2 bits (164), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 31/122 (25%), Positives = 46/122 (37%), Gaps = 31/122 (25%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNK-IISRAGN-------------R 43
           +   + FM  AL  +  +      P   VGA  V  +K I+    N              
Sbjct: 6   IDWDSYFMGIALLSSMRSKD----PNTQVGACIVNEDKRIVGVGYNGLPKGCEDTDFPWE 61

Query: 44  NR----ELKDV-TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98
                 E K     HAE+ AI     + S + L +  +YV L PC  C+ AI  + I+ +
Sbjct: 62  REGEFLETKYPYVCHAELNAI-----LNSIKSLKDCVIYVALFPCNECSKAIIQSGIKEI 116

Query: 99  YY 100
            Y
Sbjct: 117 VY 118


>gi|169832085|ref|YP_001718067.1| CMP/dCMP deaminase [Candidatus Desulforudis audaxviator MP104C]
 gi|169638929|gb|ACA60435.1| CMP/dCMP deaminase, zinc-binding [Candidatus Desulforudis
           audaxviator MP104C]
          Length = 149

 Score = 67.2 bits (164), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 29/127 (22%), Positives = 42/127 (33%), Gaps = 29/127 (22%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGN---------------RNRELK 48
             +FM  A   A+ +       VGAV V +N+ I+   N                  +L 
Sbjct: 6   DEIFMEQAHLMARRSTCLRRH-VGAVLVRDNRAIASGYNGPPSGLPHCDERGGCLREQLG 64

Query: 49  DVTAH---------AEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLY 99
             + H         AE   I             +  LYVT  PC  CA  +    +RR+ 
Sbjct: 65  VPSGHRQEICRALHAEQNVILQLAITGLNGR--DATLYVTHFPCFTCAKLLVQLGVRRII 122

Query: 100 Y--GASN 104
           Y  G  +
Sbjct: 123 YQLGYPD 129


>gi|153853661|ref|ZP_01995041.1| hypothetical protein DORLON_01032 [Dorea longicatena DSM 13814]
 gi|149753816|gb|EDM63747.1| hypothetical protein DORLON_01032 [Dorea longicatena DSM 13814]
          Length = 162

 Score = 67.2 bits (164), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 36/149 (24%), Positives = 57/149 (38%), Gaps = 32/149 (21%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVL-NNKIISRAGNR------------N 44
           +     FM  A    + + +R++ P   VG   V  +NKI+S   N              
Sbjct: 9   ISWDEYFMGVA----KLSGMRSKDPNTQVGCCIVSQDNKILSMGYNGLPTGCSDDVFPWG 64

Query: 45  RELKDV-------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRR 97
           RE  D        T H+E+ AI           L    LYV+L PC  CA AI  + I+ 
Sbjct: 65  REGDDPLETKYVYTVHSELNAILN----YRGGSLEGAKLYVSLFPCNECAKAIIQSGIKE 120

Query: 98  LYYGASNPKG-GGIENGTQFYTLATCHHS 125
           + Y  +  +G   +    + +  A  ++ 
Sbjct: 121 VIYDCNKYEGTAAVMASMKMFDAAGVNYH 149


>gi|123505764|ref|XP_001329053.1| Cytidine and deoxycytidylate deaminase zinc-binding region family
           protein [Trichomonas vaginalis G3]
 gi|121912003|gb|EAY16830.1| Cytidine and deoxycytidylate deaminase zinc-binding region family
           protein [Trichomonas vaginalis G3]
          Length = 264

 Score = 67.2 bits (164), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 22/77 (28%), Positives = 33/77 (42%), Gaps = 3/77 (3%)

Query: 53  HAEILAIRMGCRI---LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109
           H  I A+    R        +   +D+Y   EPC MC  A+  +R+ RL++   NPK GG
Sbjct: 177 HGVIDAVGEASRWAIQNDSYLCTNLDVYCYYEPCCMCTMAMVHSRVGRLFFIEPNPKYGG 236

Query: 110 IENGTQFYTLATCHHSP 126
           + N          +H  
Sbjct: 237 VMNQAHINQSPKINHRF 253


>gi|154248745|ref|YP_001409570.1| CMP/dCMP deaminase zinc-binding [Fervidobacterium nodosum Rt17-B1]
 gi|154152681|gb|ABS59913.1| CMP/dCMP deaminase zinc-binding [Fervidobacterium nodosum Rt17-B1]
          Length = 170

 Score = 67.2 bits (164), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 27/130 (20%), Positives = 49/130 (37%), Gaps = 34/130 (26%)

Query: 4   GNVFMSCALEEAQNA---ALRNEIPVGAVAVLNNKIISRAGNRN-------------REL 47
              F   A   A+ +     +    VGA+ V + +I++   N+              R+ 
Sbjct: 25  DEYFKRLAKVIAERSTCVHRK----VGALIVKDKRILATGYNQPPSGFPHCDEIGCIRDD 80

Query: 48  KDVTA----------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRR 97
             + +          HAE  A+    +           +YVT +PC++CA  I  A I++
Sbjct: 81  LSIPSGKNQEICYGLHAEQNALIQAAKFGISTD--GATIYVTHKPCSVCARLIINAGIKK 138

Query: 98  LYY--GASNP 105
           + Y  G  +P
Sbjct: 139 VVYIEGYPDP 148


>gi|327285966|ref|XP_003227702.1| PREDICTED: deoxycytidylate deaminase-like [Anolis carolinensis]
          Length = 235

 Score = 67.2 bits (164), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 32/119 (26%), Positives = 42/119 (35%), Gaps = 31/119 (26%)

Query: 5   NVFMSCALEEAQNAALRNEIP---VGAVAV-LNNKIISRAGN-RNRELKD------VTA- 52
             FM+ A   AQ +      P   VGA  V   NKI+    N       D       TA 
Sbjct: 33  EYFMAVAFLSAQRSKD----PHSQVGACIVNSENKIVGIGYNGMPNGCSDDSLPWTRTAE 88

Query: 53  -----------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
                      HAE+ AI       +   +    +YV L PC  CA  I  A I+ + +
Sbjct: 89  SKLDTKYPYVCHAELNAIMN----KNSADVKGCSMYVALFPCNECAKLIIQAGIKEVIF 143


>gi|50306895|ref|XP_453423.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
 gi|49642557|emb|CAH00519.1| KLLA0D08074p [Kluyveromyces lactis]
          Length = 340

 Score = 67.2 bits (164), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 27/120 (22%), Positives = 38/120 (31%), Gaps = 29/120 (24%)

Query: 4   GNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGN---------------RNRE 46
              FM  A   A  A    R    VG V V + ++++   N               R  +
Sbjct: 183 DTYFMKLANLAASRANCMKRR---VGCVIVRDCRVVATGYNGTPRNMKNCNQGGCSRCND 239

Query: 47  LKDVT------AHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
             D +       HAE  A+    R       P   LY    PC  C+  I    I+ + Y
Sbjct: 240 GDDKSLHTCLCLHAEENALLEAGRDRVG---PNAILYCDTCPCLTCSVKIVQTGIKEVVY 296


>gi|296195104|ref|XP_002745234.1| PREDICTED: deoxycytidylate deaminase-like [Callithrix jacchus]
          Length = 178

 Score = 67.2 bits (164), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 33/116 (28%), Positives = 42/116 (36%), Gaps = 25/116 (21%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGN-RNRELKD------VTA---- 52
             FM+ A   AQ +   N   VGA  V   NKI+    N       D       TA    
Sbjct: 17  EYFMAVAFLSAQRSKDPNSQ-VGACIVNSENKIVGIGYNGMPNGCSDDLLPWRRTAENKL 75

Query: 53  --------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
                   HAE+ AI       +   +    +YV L PC  CA  I  A IR + +
Sbjct: 76  DTKYPYVCHAELNAIMN----KNSTDVKGCTMYVALFPCNECAKLIIQAGIREVIF 127


>gi|229117824|ref|ZP_04247188.1| ComE operon protein 2 [Bacillus cereus Rock1-3]
 gi|228665621|gb|EEL21099.1| ComE operon protein 2 [Bacillus cereus Rock1-3]
          Length = 188

 Score = 67.2 bits (164), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 25/91 (27%), Positives = 39/91 (42%), Gaps = 17/91 (18%)

Query: 26  VGAVAVLNNKIISRAGNRNRELK-----DV----------TAHAEILAIRMGCRILSQEI 70
           VGA  V + +II+   N + +       D           T HAE+ A+    +  ++  
Sbjct: 31  VGATIVRDKRIIAGGYNGSIKGGVHCIDDGCYVIDNHCVRTIHAEMNALLQCAKFGAKT- 89

Query: 71  LPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
             E ++YVT  PC  C  AI  + I  +YY 
Sbjct: 90  -EEAEIYVTHFPCLQCCKAIIQSGITAVYYA 119


>gi|228902852|ref|ZP_04066995.1| ComE operon protein 2 [Bacillus thuringiensis IBL 4222]
 gi|228954613|ref|ZP_04116637.1| ComE operon protein 2 [Bacillus thuringiensis serovar kurstaki str.
           T03a001]
 gi|229071833|ref|ZP_04205046.1| ComE operon protein 2 [Bacillus cereus F65185]
 gi|229081590|ref|ZP_04214086.1| ComE operon protein 2 [Bacillus cereus Rock4-2]
 gi|229180604|ref|ZP_04307945.1| ComE operon protein 2 [Bacillus cereus 172560W]
 gi|229192539|ref|ZP_04319500.1| ComE operon protein 2 [Bacillus cereus ATCC 10876]
 gi|228590846|gb|EEK48704.1| ComE operon protein 2 [Bacillus cereus ATCC 10876]
 gi|228602847|gb|EEK60327.1| ComE operon protein 2 [Bacillus cereus 172560W]
 gi|228701696|gb|EEL54186.1| ComE operon protein 2 [Bacillus cereus Rock4-2]
 gi|228711263|gb|EEL63225.1| ComE operon protein 2 [Bacillus cereus F65185]
 gi|228805059|gb|EEM51654.1| ComE operon protein 2 [Bacillus thuringiensis serovar kurstaki str.
           T03a001]
 gi|228856776|gb|EEN01293.1| ComE operon protein 2 [Bacillus thuringiensis IBL 4222]
          Length = 188

 Score = 67.2 bits (164), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 25/91 (27%), Positives = 39/91 (42%), Gaps = 17/91 (18%)

Query: 26  VGAVAVLNNKIISRAGNRNRELK-----DV----------TAHAEILAIRMGCRILSQEI 70
           VGA  V + +II+   N + +       D           T HAE+ A+    +  ++  
Sbjct: 31  VGATIVRDKRIIAGGYNGSIKGGVHCIDDGCYVIDNHCVRTIHAEMNALLQCAKFGAKT- 89

Query: 71  LPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
             E ++YVT  PC  C  AI  + I  +YY 
Sbjct: 90  -EEAEIYVTHFPCLQCCKAIIQSGITAVYYA 119


>gi|124268129|ref|YP_001022133.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase /
           diaminohydroxyphosphoribosylaminopyrimidine deaminase
           [Methylibium petroleiphilum PM1]
 gi|124260904|gb|ABM95898.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase /
           diaminohydroxyphosphoribosylaminopyrimidine deaminase
           [Methylibium petroleiphilum PM1]
          Length = 377

 Score = 67.2 bits (164), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 27/122 (22%), Positives = 43/122 (35%), Gaps = 15/122 (12%)

Query: 10  CALEEAQNA-ALRNEIP-VGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
            AL  A  A  L +  P VG V    + ++++    +       +AHAE+ A+R      
Sbjct: 11  LALRNANEAIGLSDPNPRVGCVITAPDGRLLASGHTQRA----GSAHAEVSALRAAQAAG 66

Query: 67  SQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
                     +VTLEPC        C  A+  A +  +     +P      +G      A
Sbjct: 67  HTVR--GGTAWVTLEPCSHHGRTPPCCDALVEAGVAHVMVALQDPNPLVAGHGIGRLRAA 124

Query: 121 TC 122
             
Sbjct: 125 GI 126


>gi|297293741|ref|XP_001092239.2| PREDICTED: deoxycytidylate deaminase isoform 4 [Macaca mulatta]
          Length = 189

 Score = 67.2 bits (164), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 32/116 (27%), Positives = 42/116 (36%), Gaps = 25/116 (21%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGN-RNRELKD------VTA---- 52
             FM+ A   AQ +   N   VGA  V   NKI+    N       D       TA    
Sbjct: 28  EYFMAVAFLSAQRSKDPNSQ-VGACIVNSENKIVGIGYNGMPNGCSDDLLPWSRTAENKL 86

Query: 53  --------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
                   HAE+ AI       +   +    +YV L PC  CA  I  A I+ + +
Sbjct: 87  DTKYPYVCHAELNAIMN----KNSTDVKGCSMYVALFPCNECAKLIIQAGIKEVIF 138


>gi|229076001|ref|ZP_04208974.1| ComE operon protein 2 [Bacillus cereus Rock4-18]
 gi|229104958|ref|ZP_04235614.1| ComE operon protein 2 [Bacillus cereus Rock3-28]
 gi|228678452|gb|EEL32673.1| ComE operon protein 2 [Bacillus cereus Rock3-28]
 gi|228707113|gb|EEL59313.1| ComE operon protein 2 [Bacillus cereus Rock4-18]
          Length = 188

 Score = 67.2 bits (164), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 25/91 (27%), Positives = 39/91 (42%), Gaps = 17/91 (18%)

Query: 26  VGAVAVLNNKIISRAGNRNRELK-----DV----------TAHAEILAIRMGCRILSQEI 70
           VGA  V + +II+   N + +       D           T HAE+ A+    +  ++  
Sbjct: 31  VGATIVRDKRIIAGGYNGSIKGGVHCIDDGCYVIDNHCVRTIHAEMNALLQCAKFGAKT- 89

Query: 71  LPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
             E ++YVT  PC  C  AI  + I  +YY 
Sbjct: 90  -EEAEIYVTHFPCLQCCKAIIQSGITAVYYA 119


>gi|229019551|ref|ZP_04176367.1| ComE operon protein 2 [Bacillus cereus AH1273]
 gi|229025792|ref|ZP_04182191.1| ComE operon protein 2 [Bacillus cereus AH1272]
 gi|228735500|gb|EEL86096.1| ComE operon protein 2 [Bacillus cereus AH1272]
 gi|228741717|gb|EEL91901.1| ComE operon protein 2 [Bacillus cereus AH1273]
          Length = 185

 Score = 67.2 bits (164), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 25/91 (27%), Positives = 38/91 (41%), Gaps = 17/91 (18%)

Query: 26  VGAVAVLNNKIISRAGNRNRELK-----DV----------TAHAEILAIRMGCRILSQEI 70
           VGA  V + +II+   N + +       D           T HAE+ A+    +   +  
Sbjct: 28  VGATIVRDKRIIAGGYNGSIKGGVHCIDDGCYVIDNHCVRTIHAEMNALLQCAKFGVKT- 86

Query: 71  LPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
             E ++YVT  PC  C  AI  + I  +YY 
Sbjct: 87  -EESEIYVTHFPCLQCCKAIIQSGITAVYYA 116


>gi|206969676|ref|ZP_03230630.1| ComE operon protein 2 [Bacillus cereus AH1134]
 gi|218899494|ref|YP_002447905.1| ComE operon protein 2 [Bacillus cereus G9842]
 gi|206735364|gb|EDZ52532.1| ComE operon protein 2 [Bacillus cereus AH1134]
 gi|218543217|gb|ACK95611.1| ComE operon protein 2 [Bacillus cereus G9842]
          Length = 185

 Score = 67.2 bits (164), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 25/91 (27%), Positives = 39/91 (42%), Gaps = 17/91 (18%)

Query: 26  VGAVAVLNNKIISRAGNRNRELK-----DV----------TAHAEILAIRMGCRILSQEI 70
           VGA  V + +II+   N + +       D           T HAE+ A+    +  ++  
Sbjct: 28  VGATIVRDKRIIAGGYNGSIKGGVHCIDDGCYVIDNHCVRTIHAEMNALLQCAKFGAKT- 86

Query: 71  LPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
             E ++YVT  PC  C  AI  + I  +YY 
Sbjct: 87  -EEAEIYVTHFPCLQCCKAIIQSGITAVYYA 116


>gi|228923079|ref|ZP_04086371.1| ComE operon protein 2 [Bacillus thuringiensis serovar huazhongensis
           BGSC 4BD1]
 gi|228836577|gb|EEM81926.1| ComE operon protein 2 [Bacillus thuringiensis serovar huazhongensis
           BGSC 4BD1]
          Length = 185

 Score = 66.9 bits (163), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 25/91 (27%), Positives = 39/91 (42%), Gaps = 17/91 (18%)

Query: 26  VGAVAVLNNKIISRAGNRNRELK-----DV----------TAHAEILAIRMGCRILSQEI 70
           VGA  V + +II+   N + +       D           T HAE+ A+    +  ++  
Sbjct: 28  VGATIVRDKRIIAGGYNGSIKGGVHCIDDGCYVIDNHCVRTIHAEMNALLQCAKFGAKT- 86

Query: 71  LPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
             E ++YVT  PC  C  AI  + I  +YY 
Sbjct: 87  -EEAEIYVTHFPCLQCCKAIIQSGITAVYYA 116


>gi|308471917|ref|XP_003098188.1| hypothetical protein CRE_12208 [Caenorhabditis remanei]
 gi|308269339|gb|EFP13292.1| hypothetical protein CRE_12208 [Caenorhabditis remanei]
          Length = 194

 Score = 66.9 bits (163), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 30/121 (24%), Positives = 50/121 (41%), Gaps = 29/121 (23%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAV-LNNKIISRAGNR----------NRE 46
           ++K   F+  A   +  +      P   VG V V  +N I+S   N             +
Sbjct: 45  LQKHQRFLRMAKVTSLRSKD----PNTQVGCVIVDKDNCIVSVGYNGFPIGVDDDVFRWD 100

Query: 47  LKDV-------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLY 99
            +D          HAE+ AI    +  +   L +  +YVTL PC  CA  +  +R++++Y
Sbjct: 101 KEDPEDNKHLYVVHAEMNAIIN--KRCAT--LHDCIVYVTLFPCNKCAQMLIQSRVKKVY 156

Query: 100 Y 100
           Y
Sbjct: 157 Y 157


>gi|304439109|ref|ZP_07399028.1| competence protein ComEB [Peptoniphilus duerdenii ATCC BAA-1640]
 gi|304372468|gb|EFM26055.1| competence protein ComEB [Peptoniphilus duerdenii ATCC BAA-1640]
          Length = 140

 Score = 66.9 bits (163), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 29/118 (24%), Positives = 43/118 (36%), Gaps = 21/118 (17%)

Query: 1   MKK--GNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRN---RELKD----- 49
           M+K     FM      A  +       VG + V  +N+I+S   N +    +  D     
Sbjct: 1   MRKSWDEYFMEITEMVATRSTCDRAF-VGCILVNKDNRIVSTGYNGSLSGNKSCDEIGHT 59

Query: 50  -------VTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
                   T HAE+ A+    +      +     YVT  PC  C  A+  A I  +YY
Sbjct: 60  MRDGHCIATIHAEMNALLYCAKEGIS--VKGCKCYVTHFPCLNCTKALLQAGITEIYY 115


>gi|147671596|ref|YP_001215236.1| putative deoxycytidylate deaminase [Vibrio cholerae O395]
 gi|153822471|ref|ZP_01975138.1| deoxycytidylate deaminase, putative [Vibrio cholerae B33]
 gi|254849997|ref|ZP_05239347.1| deoxycytidylate deaminase [Vibrio cholerae MO10]
 gi|297580143|ref|ZP_06942070.1| conserved hypothetical protein [Vibrio cholerae RC385]
 gi|298499626|ref|ZP_07009432.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
 gi|126519994|gb|EAZ77217.1| deoxycytidylate deaminase, putative [Vibrio cholerae B33]
 gi|146313979|gb|ABQ18519.1| putative deoxycytidylate deaminase [Vibrio cholerae O395]
 gi|254845702|gb|EET24116.1| deoxycytidylate deaminase [Vibrio cholerae MO10]
 gi|297535789|gb|EFH74623.1| conserved hypothetical protein [Vibrio cholerae RC385]
 gi|297541607|gb|EFH77658.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
          Length = 166

 Score = 66.9 bits (163), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 27/86 (31%), Positives = 36/86 (41%), Gaps = 18/86 (20%)

Query: 26  VGAVAVLNNKIISRAGN---------RNRELKDV----TAHAEILAIRMGCRILSQEILP 72
           VGAV    N+I+S   N          + + +D+    T HAE  AI    R      L 
Sbjct: 32  VGAVITKQNRIVSVGFNGYPHGISDSASTDDRDMKYLKTLHAEENAILFAKR-----DLD 86

Query: 73  EVDLYVTLEPCTMCAAAISLARIRRL 98
             ++YVT  PC  CAA I    I  +
Sbjct: 87  GCEIYVTHFPCPNCAAKIIQTGISAV 112


>gi|153817018|ref|ZP_01969685.1| deoxycytidylate deaminase, putative [Vibrio cholerae NCTC 8457]
 gi|126512428|gb|EAZ75022.1| deoxycytidylate deaminase, putative [Vibrio cholerae NCTC 8457]
          Length = 166

 Score = 66.9 bits (163), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 27/86 (31%), Positives = 36/86 (41%), Gaps = 18/86 (20%)

Query: 26  VGAVAVLNNKIISRAGN---------RNRELKDV----TAHAEILAIRMGCRILSQEILP 72
           VGAV    N+I+S   N          + + +D+    T HAE  AI    R      L 
Sbjct: 32  VGAVITKQNRIVSVGFNGYPHGISDSASTDDRDMKYLKTLHAEENAILFAKR-----DLD 86

Query: 73  EVDLYVTLEPCTMCAAAISLARIRRL 98
             ++YVT  PC  CAA I    I  +
Sbjct: 87  GCEIYVTHFPCPNCAAKIIQTGISAV 112


>gi|153214325|ref|ZP_01949326.1| deoxycytidylate deaminase, putative [Vibrio cholerae 1587]
 gi|124115382|gb|EAY34202.1| deoxycytidylate deaminase, putative [Vibrio cholerae 1587]
          Length = 161

 Score = 66.9 bits (163), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 27/86 (31%), Positives = 36/86 (41%), Gaps = 18/86 (20%)

Query: 26  VGAVAVLNNKIISRAGN---------RNRELKDV----TAHAEILAIRMGCRILSQEILP 72
           VGAV    N+I+S   N          + + +D+    T HAE  AI    R      L 
Sbjct: 27  VGAVITKQNRIVSVGFNGYPHGISDSASTDDRDMKYLKTLHAEENAILFAKR-----DLD 81

Query: 73  EVDLYVTLEPCTMCAAAISLARIRRL 98
             ++YVT  PC  CAA I    I  +
Sbjct: 82  GCEIYVTHFPCPNCAAKIIQTGISAV 107


>gi|153825415|ref|ZP_01978082.1| deoxycytidylate deaminase [Vibrio cholerae MZO-2]
 gi|254224811|ref|ZP_04918427.1| deoxycytidylate deaminase, putative [Vibrio cholerae V51]
 gi|125622874|gb|EAZ51192.1| deoxycytidylate deaminase, putative [Vibrio cholerae V51]
 gi|149740961|gb|EDM55038.1| deoxycytidylate deaminase [Vibrio cholerae MZO-2]
          Length = 161

 Score = 66.9 bits (163), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 27/86 (31%), Positives = 36/86 (41%), Gaps = 18/86 (20%)

Query: 26  VGAVAVLNNKIISRAGN---------RNRELKDV----TAHAEILAIRMGCRILSQEILP 72
           VGAV    N+I+S   N          + + +D+    T HAE  AI    R      L 
Sbjct: 27  VGAVITKQNRIVSVGFNGYPHGISDSASTDDRDMKYLKTLHAEENAILFAKR-----DLD 81

Query: 73  EVDLYVTLEPCTMCAAAISLARIRRL 98
             ++YVT  PC  CAA I    I  +
Sbjct: 82  GCEIYVTHFPCPNCAAKIIQTGISAV 107


>gi|15601595|ref|NP_233226.1| deoxycytidylate deaminase, putative [Vibrio cholerae O1 biovar
           eltor str. N16961]
 gi|121588185|ref|ZP_01677930.1| deoxycytidylate deaminase, putative [Vibrio cholerae 2740-80]
 gi|121729861|ref|ZP_01682290.1| deoxycytidylate deaminase, putative [Vibrio cholerae V52]
 gi|153802745|ref|ZP_01957331.1| deoxycytidylate deaminase, putative [Vibrio cholerae MZO-3]
 gi|153829488|ref|ZP_01982155.1| putative deoxycytidylate deaminase [Vibrio cholerae 623-39]
 gi|227812406|ref|YP_002812416.1| putative deoxycytidylate deaminase [Vibrio cholerae M66-2]
 gi|229506010|ref|ZP_04395519.1| deoxycytidylate deaminase [Vibrio cholerae BX 330286]
 gi|229510134|ref|ZP_04399614.1| deoxycytidylate deaminase [Vibrio cholerae B33]
 gi|229514270|ref|ZP_04403731.1| deoxycytidylate deaminase [Vibrio cholerae TMA 21]
 gi|229517736|ref|ZP_04407181.1| deoxycytidylate deaminase [Vibrio cholerae RC9]
 gi|229522385|ref|ZP_04411801.1| deoxycytidylate deaminase [Vibrio cholerae TM 11079-80]
 gi|229526654|ref|ZP_04416058.1| deoxycytidylate deaminase [Vibrio cholerae bv. albensis VL426]
 gi|229528303|ref|ZP_04417694.1| deoxycytidylate deaminase [Vibrio cholerae 12129(1)]
 gi|229605541|ref|YP_002876245.1| deoxycytidylate deaminase [Vibrio cholerae MJ-1236]
 gi|254284476|ref|ZP_04959443.1| deoxycytidylate deaminase, putative [Vibrio cholerae AM-19226]
 gi|255746409|ref|ZP_05420356.1| deoxycytidylate deaminase [Vibrio cholera CIRS 101]
 gi|262158237|ref|ZP_06029354.1| deoxycytidylate deaminase [Vibrio cholerae INDRE 91/1]
 gi|262169113|ref|ZP_06036806.1| deoxycytidylate deaminase [Vibrio cholerae RC27]
 gi|262191582|ref|ZP_06049763.1| deoxycytidylate deaminase [Vibrio cholerae CT 5369-93]
 gi|9658270|gb|AAF96738.1| deoxycytidylate deaminase, putative [Vibrio cholerae O1 biovar El
           Tor str. N16961]
 gi|121547577|gb|EAX57679.1| deoxycytidylate deaminase, putative [Vibrio cholerae 2740-80]
 gi|121628394|gb|EAX60893.1| deoxycytidylate deaminase, putative [Vibrio cholerae V52]
 gi|124121702|gb|EAY40445.1| deoxycytidylate deaminase, putative [Vibrio cholerae MZO-3]
 gi|148875007|gb|EDL73142.1| putative deoxycytidylate deaminase [Vibrio cholerae 623-39]
 gi|150425261|gb|EDN17037.1| deoxycytidylate deaminase, putative [Vibrio cholerae AM-19226]
 gi|227011548|gb|ACP07759.1| putative deoxycytidylate deaminase [Vibrio cholerae M66-2]
 gi|227015488|gb|ACP11697.1| putative deoxycytidylate deaminase [Vibrio cholerae O395]
 gi|229334665|gb|EEO00151.1| deoxycytidylate deaminase [Vibrio cholerae 12129(1)]
 gi|229336812|gb|EEO01830.1| deoxycytidylate deaminase [Vibrio cholerae bv. albensis VL426]
 gi|229340370|gb|EEO05376.1| deoxycytidylate deaminase [Vibrio cholerae TM 11079-80]
 gi|229345772|gb|EEO10745.1| deoxycytidylate deaminase [Vibrio cholerae RC9]
 gi|229348250|gb|EEO13208.1| deoxycytidylate deaminase [Vibrio cholerae TMA 21]
 gi|229352579|gb|EEO17519.1| deoxycytidylate deaminase [Vibrio cholerae B33]
 gi|229356361|gb|EEO21279.1| deoxycytidylate deaminase [Vibrio cholerae BX 330286]
 gi|229372027|gb|ACQ62449.1| deoxycytidylate deaminase [Vibrio cholerae MJ-1236]
 gi|255736163|gb|EET91561.1| deoxycytidylate deaminase [Vibrio cholera CIRS 101]
 gi|262022394|gb|EEY41102.1| deoxycytidylate deaminase [Vibrio cholerae RC27]
 gi|262029919|gb|EEY48566.1| deoxycytidylate deaminase [Vibrio cholerae INDRE 91/1]
 gi|262032547|gb|EEY51104.1| deoxycytidylate deaminase [Vibrio cholerae CT 5369-93]
 gi|327485838|gb|AEA80244.1| dCMP deaminase [Vibrio cholerae LMA3894-4]
          Length = 161

 Score = 66.9 bits (163), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 27/86 (31%), Positives = 36/86 (41%), Gaps = 18/86 (20%)

Query: 26  VGAVAVLNNKIISRAGN---------RNRELKDV----TAHAEILAIRMGCRILSQEILP 72
           VGAV    N+I+S   N          + + +D+    T HAE  AI    R      L 
Sbjct: 27  VGAVITKQNRIVSVGFNGYPHGISDSASTDDRDMKYLKTLHAEENAILFAKR-----DLD 81

Query: 73  EVDLYVTLEPCTMCAAAISLARIRRL 98
             ++YVT  PC  CAA I    I  +
Sbjct: 82  GCEIYVTHFPCPNCAAKIIQTGISAV 107


>gi|181537|gb|AAA35755.1| deoxycytidylate deaminase [Homo sapiens]
          Length = 178

 Score = 66.9 bits (163), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 32/116 (27%), Positives = 42/116 (36%), Gaps = 25/116 (21%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGN-RNRELKD------VTA---- 52
             FM+ A   AQ +   N   VGA  V   NKI+    N       D       TA    
Sbjct: 17  EYFMAVAFLSAQRSKDPNSQ-VGACIVNSENKIVGIGYNGMPNGCSDDVLPWRRTAENKL 75

Query: 53  --------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
                   HAE+ AI       +   +    +YV L PC  CA  I  A I+ + +
Sbjct: 76  DTKYPYVCHAELNAIMN----KNSTDVKGCSMYVALFPCNECAKLIIQAGIKEVIF 127


>gi|260495001|ref|ZP_05815130.1| ComE operon protein 2 [Fusobacterium sp. 3_1_33]
 gi|260197444|gb|EEW94962.1| ComE operon protein 2 [Fusobacterium sp. 3_1_33]
          Length = 161

 Score = 66.9 bits (163), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 29/122 (23%), Positives = 44/122 (36%), Gaps = 31/122 (25%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNK-IISRAGNRNRELKD------- 49
           +   + FM  A+  +  +      P   VGA  V  +K I+    N   +  D       
Sbjct: 6   INWDSYFMGIAILSSMRSKD----PNTQVGACIVNEDKRIVGVGYNGLPKGCDDKEFPWE 61

Query: 50  ----------V-TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98
                         HAE+ AI     + S + L    +YV L PC  C  AI  + I+ +
Sbjct: 62  RDGEFLNTKYPYVCHAELNAI-----LNSIKSLKNCTIYVALFPCHECTKAIIQSGIKEI 116

Query: 99  YY 100
            Y
Sbjct: 117 VY 118


>gi|284047807|ref|YP_003398146.1| CMP/dCMP deaminase zinc-binding protein [Acidaminococcus fermentans
           DSM 20731]
 gi|283952028|gb|ADB46831.1| CMP/dCMP deaminase zinc-binding protein [Acidaminococcus fermentans
           DSM 20731]
          Length = 150

 Score = 66.9 bits (163), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 29/134 (21%), Positives = 49/134 (36%), Gaps = 33/134 (24%)

Query: 1   MKK---GNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGN------------- 42
           M++    + FM  A   ++ +    R    VGAV V + +I++   N             
Sbjct: 1   MERPDWDSYFMEIAEVVSKRSTCLRRK---VGAVLVKDRQILATGYNGTPKGLPHCEQVG 57

Query: 43  -RNRELKDVTA---------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISL 92
               +L   +          HAE  A+     +     L    LY T +PC +C+  +  
Sbjct: 58  CLREKLHVPSGQNHELCRGIHAEQNAVIQAA-VNGVSTL-GATLYCTHQPCVVCSKILIN 115

Query: 93  ARIRRLYYGASNPK 106
           A I+R+ Y    P 
Sbjct: 116 AGIKRIVYANPYPD 129


>gi|326430014|gb|EGD75584.1| deoxycytidylate deaminase [Salpingoeca sp. ATCC 50818]
          Length = 237

 Score = 66.9 bits (163), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 29/126 (23%), Positives = 44/126 (34%), Gaps = 32/126 (25%)

Query: 5   NVF-MSCALEEAQNAALRNEIPV---GAVAVLN-NKIISRAGN----------------- 42
             + M+ A+  ++ +      PV   G V V     ++S   N                 
Sbjct: 20  EAWHMAMAILASKRSKD----PVTQVGCVIVDPKGIVVSMGYNGFPIGCSDEELPWDKHA 75

Query: 43  -RNRELKDV-TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
               E K     HAE+ AI       + + +    LY TL PC  CA  I  A I+ + Y
Sbjct: 76  DNPLETKFPYVCHAEMNAILN----TNDQDVSGCILYATLFPCNECAKMIIQAGIKEVVY 131

Query: 101 GASNPK 106
             +  K
Sbjct: 132 LCNKSK 137


>gi|116628436|ref|YP_821055.1| late competence protein required for DNA binding and uptake
           [Streptococcus thermophilus LMD-9]
 gi|116101713|gb|ABJ66859.1| Deoxycytidylate deaminase [Streptococcus thermophilus LMD-9]
 gi|312279054|gb|ADQ63711.1| Cytidine/deoxycytidylate deaminase family protein [Streptococcus
           thermophilus ND03]
          Length = 151

 Score = 66.9 bits (163), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 31/122 (25%), Positives = 45/122 (36%), Gaps = 18/122 (14%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKD---------------VTAHAEILAIRMGCRILSQEI 70
           VGAV V + +II+   N      D                T HAE+ A+    +      
Sbjct: 29  VGAVLVKDKRIIATGYNGGVSEADNCNEVGHYMEDGHCIRTVHAEMNALIQCAKEGIST- 87

Query: 71  LPEVDLYVTLEPCTMCAAAISLARIRRLYY-GASNPKGGGIENGTQFYTLATCHHSPEIY 129
               ++YVT  PC  C  A+  A + ++ Y     P    IE   Q       H  PE++
Sbjct: 88  -KNTEIYVTHFPCINCTKALLQAGVVKITYKANYRPHAFAIELMEQKGVSYVQHDVPEVH 146

Query: 130 PG 131
            G
Sbjct: 147 LG 148


>gi|209734934|gb|ACI68336.1| Deoxycytidylate deaminase [Salmo salar]
          Length = 196

 Score = 66.9 bits (163), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 32/119 (26%), Positives = 43/119 (36%), Gaps = 31/119 (26%)

Query: 5   NVFMSCALEEAQNAALRNEIP---VGAVAV-LNNKIISRAGNRNRELKD-------VTA- 52
           + FM+ A   AQ +      P   VGA  V   NKI+    N      D        +A 
Sbjct: 34  DYFMAVAFLSAQRSKD----PSSQVGACIVNRENKIVGIGYNGMPNGCDDDLLPWSCSAN 89

Query: 53  -----------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
                      HAE+ AI       +   +    +YV L PC  CA  I  A I+ + Y
Sbjct: 90  DRLDTKYPYVCHAELNAIMN----KNSADVKGCSMYVALFPCNECAKLIIQAGIKDVIY 144


>gi|295706661|ref|YP_003599736.1| ComE operon protein [Bacillus megaterium DSM 319]
 gi|37650595|emb|CAD69019.1| ComEB protein [Bacillus megaterium]
 gi|294804320|gb|ADF41386.1| ComE operon protein [Bacillus megaterium DSM 319]
          Length = 188

 Score = 66.9 bits (163), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 27/116 (23%), Positives = 46/116 (39%), Gaps = 18/116 (15%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELK-----------D 49
           +     FM+ +   A  +     + VGA  V + +II+   N +               D
Sbjct: 4   ISWDQYFMAQSHLLALRSTCER-LAVGATVVRDKRIIAGGYNGSISGGVHCADEGCYVID 62

Query: 50  V----TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
                T HAE+ A+    +   +    + ++YVT  PC  C  A+  A I+ +YY 
Sbjct: 63  GHCVRTVHAEVNALLQCAKFGVKT--EDAEVYVTHFPCLNCCKALIQAGIKTVYYA 116


>gi|327313504|ref|YP_004328941.1| putative dCMP deaminase [Prevotella denticola F0289]
 gi|326946111|gb|AEA21996.1| putative dCMP deaminase [Prevotella denticola F0289]
          Length = 170

 Score = 66.9 bits (163), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 32/110 (29%), Positives = 40/110 (36%), Gaps = 15/110 (13%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRE------------LKDVT 51
              ++  A   A+N+  +    VGA+ V N  IIS   N                 K   
Sbjct: 25  DYRYLRMAHIWAENSYCKR-RQVGALVVKNKMIISDGYNGTPSGFENVCEDEAGVTKSYV 83

Query: 52  AHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
            HAE  AI    R  +        LYVT  PC  CA  I  A I R+ Y 
Sbjct: 84  LHAEANAITKLARSGNNS--EGSTLYVTASPCIECAKLIIQAGICRVVYA 131


>gi|268574948|ref|XP_002642453.1| Hypothetical protein CBG06863 [Caenorhabditis briggsae]
 gi|187033808|emb|CAP27096.1| hypothetical protein CBG_06863 [Caenorhabditis briggsae AF16]
          Length = 200

 Score = 66.9 bits (163), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 29/121 (23%), Positives = 49/121 (40%), Gaps = 29/121 (23%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAV-LNNKIISRAGNR----------NRE 46
           ++K   F+  A   +  +      P   VG V V   N I+S   N             +
Sbjct: 51  LEKHQRFLRMAKVTSLRSKD----PNTQVGCVIVDKENCIVSVGYNGFPIGVDDDVFRWD 106

Query: 47  LKDV-------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLY 99
            +D          HAE+ AI    +  +   L +  +YVTL PC  CA  +  +R++++Y
Sbjct: 107 KEDPEDNKHLYVVHAEMNAIIN--KRCAT--LHDCTVYVTLFPCNKCAQMLIQSRVKKVY 162

Query: 100 Y 100
           +
Sbjct: 163 F 163


>gi|15900639|ref|NP_345243.1| cytidine and deoxycytidylate deaminase family protein
           [Streptococcus pneumoniae TIGR4]
 gi|15902698|ref|NP_358248.1| cytidine and deoxycytidylate deaminase family protein
           [Streptococcus pneumoniae R6]
 gi|111657502|ref|ZP_01408246.1| hypothetical protein SpneT_02001292 [Streptococcus pneumoniae
           TIGR4]
 gi|116515918|ref|YP_816142.1| cytidine and deoxycytidylate deaminase family protein
           [Streptococcus pneumoniae D39]
 gi|148985317|ref|ZP_01818540.1| phosphomethylpyrimidine kinase [Streptococcus pneumoniae SP3-BS71]
 gi|148989822|ref|ZP_01821116.1| phosphomethylpyrimidine kinase [Streptococcus pneumoniae SP6-BS73]
 gi|148992405|ref|ZP_01822100.1| phosphomethylpyrimidine kinase [Streptococcus pneumoniae SP9-BS68]
 gi|148997181|ref|ZP_01824835.1| cytidine and deoxycytidylate deaminase family protein
           [Streptococcus pneumoniae SP11-BS70]
 gi|149003356|ref|ZP_01828245.1| phosphomethylpyrimidine kinase [Streptococcus pneumoniae SP14-BS69]
 gi|149007622|ref|ZP_01831239.1| cytidine and deoxycytidylate deaminase family protein
           [Streptococcus pneumoniae SP18-BS74]
 gi|149010633|ref|ZP_01832004.1| cytidine and deoxycytidylate deaminase family protein
           [Streptococcus pneumoniae SP19-BS75]
 gi|149020384|ref|ZP_01835276.1| phosphomethylpyrimidine kinase [Streptococcus pneumoniae SP23-BS72]
 gi|168484853|ref|ZP_02709798.1| ComE operon protein 2 [Streptococcus pneumoniae CDC1873-00]
 gi|168486764|ref|ZP_02711272.1| ComE operon protein 2 [Streptococcus pneumoniae CDC1087-00]
 gi|168488412|ref|ZP_02712611.1| ComE operon protein 2 [Streptococcus pneumoniae SP195]
 gi|168490831|ref|ZP_02714974.1| ComE operon protein 2 [Streptococcus pneumoniae CDC0288-04]
 gi|168492893|ref|ZP_02717036.1| ComE operon protein 2 [Streptococcus pneumoniae CDC3059-06]
 gi|168575403|ref|ZP_02721339.1| ComE operon protein 2 [Streptococcus pneumoniae MLV-016]
 gi|169834471|ref|YP_001694207.1| ComE operon protein 2 [Streptococcus pneumoniae Hungary19A-6]
 gi|182683664|ref|YP_001835411.1| cytidine and deoxycytidylate deaminase family protein
           [Streptococcus pneumoniae CGSP14]
 gi|194398250|ref|YP_002037390.1| cytidine and deoxycytidylate deaminase family protein
           [Streptococcus pneumoniae G54]
 gi|221231541|ref|YP_002510693.1| cytidine and deoxycytidylate deaminase [Streptococcus pneumoniae
           ATCC 700669]
 gi|225854253|ref|YP_002735765.1| ComE operon protein 2 [Streptococcus pneumoniae JJA]
 gi|225856420|ref|YP_002737931.1| ComE operon protein 2 [Streptococcus pneumoniae P1031]
 gi|225858555|ref|YP_002740065.1| ComE operon protein 2 [Streptococcus pneumoniae 70585]
 gi|225860719|ref|YP_002742228.1| ComE operon protein 2 [Streptococcus pneumoniae Taiwan19F-14]
 gi|237650412|ref|ZP_04524664.1| ComE operon protein 2 [Streptococcus pneumoniae CCRI 1974]
 gi|237822476|ref|ZP_04598321.1| ComE operon protein 2 [Streptococcus pneumoniae CCRI 1974M2]
 gi|298230044|ref|ZP_06963725.1| ComE operon protein 2 [Streptococcus pneumoniae str. Canada
           MDR_19F]
 gi|298255825|ref|ZP_06979411.1| ComE operon protein 2 [Streptococcus pneumoniae str. Canada
           MDR_19A]
 gi|298502530|ref|YP_003724470.1| competence protein ComEB [Streptococcus pneumoniae TCH8431/19A]
 gi|303255840|ref|ZP_07341881.1| putative cytidine and deoxycytidylate deaminase [Streptococcus
           pneumoniae BS455]
 gi|303260007|ref|ZP_07345981.1| cytidine and deoxycytidylate deaminase family protein
           [Streptococcus pneumoniae SP-BS293]
 gi|303261413|ref|ZP_07347361.1| cytidine and deoxycytidylate deaminase family protein
           [Streptococcus pneumoniae SP14-BS292]
 gi|303264080|ref|ZP_07350001.1| cytidine and deoxycytidylate deaminase family protein
           [Streptococcus pneumoniae BS397]
 gi|303267618|ref|ZP_07353458.1| cytidine and deoxycytidylate deaminase family protein
           [Streptococcus pneumoniae BS457]
 gi|303269548|ref|ZP_07355312.1| cytidine and deoxycytidylate deaminase family protein
           [Streptococcus pneumoniae BS458]
 gi|307067348|ref|YP_003876314.1| deoxycytidylate deaminase [Streptococcus pneumoniae AP200]
 gi|307127704|ref|YP_003879735.1| ComE operon protein 2 [Streptococcus pneumoniae 670-6B]
 gi|14972218|gb|AAK74883.1| cytidine and deoxycytidylate deaminase family protein
           [Streptococcus pneumoniae TIGR4]
 gi|15458240|gb|AAK99458.1| dCMP deaminase [Streptococcus pneumoniae R6]
 gi|116076494|gb|ABJ54214.1| cytidine and deoxycytidylate deaminase family protein
           [Streptococcus pneumoniae D39]
 gi|147756881|gb|EDK63921.1| cytidine and deoxycytidylate deaminase family protein
           [Streptococcus pneumoniae SP11-BS70]
 gi|147758539|gb|EDK65537.1| phosphomethylpyrimidine kinase [Streptococcus pneumoniae SP14-BS69]
 gi|147760777|gb|EDK67748.1| cytidine and deoxycytidylate deaminase family protein
           [Streptococcus pneumoniae SP18-BS74]
 gi|147765114|gb|EDK72043.1| cytidine and deoxycytidylate deaminase family protein
           [Streptococcus pneumoniae SP19-BS75]
 gi|147922515|gb|EDK73634.1| phosphomethylpyrimidine kinase [Streptococcus pneumoniae SP3-BS71]
 gi|147924764|gb|EDK75848.1| phosphomethylpyrimidine kinase [Streptococcus pneumoniae SP6-BS73]
 gi|147928722|gb|EDK79735.1| phosphomethylpyrimidine kinase [Streptococcus pneumoniae SP9-BS68]
 gi|147930686|gb|EDK81668.1| phosphomethylpyrimidine kinase [Streptococcus pneumoniae SP23-BS72]
 gi|168996973|gb|ACA37585.1| ComE operon protein 2 [Streptococcus pneumoniae Hungary19A-6]
 gi|172042006|gb|EDT50052.1| ComE operon protein 2 [Streptococcus pneumoniae CDC1873-00]
 gi|182628998|gb|ACB89946.1| cytidine and deoxycytidylate deaminase family protein
           [Streptococcus pneumoniae CGSP14]
 gi|183570286|gb|EDT90814.1| ComE operon protein 2 [Streptococcus pneumoniae CDC1087-00]
 gi|183573165|gb|EDT93693.1| ComE operon protein 2 [Streptococcus pneumoniae SP195]
 gi|183574679|gb|EDT95207.1| ComE operon protein 2 [Streptococcus pneumoniae CDC0288-04]
 gi|183576942|gb|EDT97470.1| ComE operon protein 2 [Streptococcus pneumoniae CDC3059-06]
 gi|183578400|gb|EDT98928.1| ComE operon protein 2 [Streptococcus pneumoniae MLV-016]
 gi|194357917|gb|ACF56365.1| cytidine and deoxycytidylate deaminase family protein
           [Streptococcus pneumoniae G54]
 gi|220674001|emb|CAR68514.1| putative cytidine and deoxycytidylate deaminase [Streptococcus
           pneumoniae ATCC 700669]
 gi|225720156|gb|ACO16010.1| ComE operon protein 2 [Streptococcus pneumoniae 70585]
 gi|225723766|gb|ACO19619.1| ComE operon protein 2 [Streptococcus pneumoniae JJA]
 gi|225725327|gb|ACO21179.1| ComE operon protein 2 [Streptococcus pneumoniae P1031]
 gi|225727835|gb|ACO23686.1| ComE operon protein 2 [Streptococcus pneumoniae Taiwan19F-14]
 gi|298238125|gb|ADI69256.1| possible competence protein ComEB [Streptococcus pneumoniae
           TCH8431/19A]
 gi|301793904|emb|CBW36300.1| putative cytidine and deoxycytidylate deaminase [Streptococcus
           pneumoniae INV104]
 gi|301799762|emb|CBW32331.1| putative cytidine and deoxycytidylate deaminase [Streptococcus
           pneumoniae OXC141]
 gi|301801592|emb|CBW34290.1| putative cytidine and deoxycytidylate deaminase [Streptococcus
           pneumoniae INV200]
 gi|302597224|gb|EFL64329.1| putative cytidine and deoxycytidylate deaminase [Streptococcus
           pneumoniae BS455]
 gi|302637547|gb|EFL68034.1| cytidine and deoxycytidylate deaminase family protein
           [Streptococcus pneumoniae SP14-BS292]
 gi|302638926|gb|EFL69387.1| cytidine and deoxycytidylate deaminase family protein
           [Streptococcus pneumoniae SP-BS293]
 gi|302640933|gb|EFL71316.1| cytidine and deoxycytidylate deaminase family protein
           [Streptococcus pneumoniae BS458]
 gi|302642848|gb|EFL73155.1| cytidine and deoxycytidylate deaminase family protein
           [Streptococcus pneumoniae BS457]
 gi|302646485|gb|EFL76711.1| cytidine and deoxycytidylate deaminase family protein
           [Streptococcus pneumoniae BS397]
 gi|306408885|gb|ADM84312.1| Deoxycytidylate deaminase [Streptococcus pneumoniae AP200]
 gi|306484766|gb|ADM91635.1| ComE operon protein 2 [Streptococcus pneumoniae 670-6B]
 gi|327390102|gb|EGE88445.1| putative deoxycytidylate deaminase [Streptococcus pneumoniae
           GA04375]
 gi|332073130|gb|EGI83609.1| putative deoxycytidylate deaminase [Streptococcus pneumoniae
           GA17570]
 gi|332076024|gb|EGI86490.1| putative deoxycytidylate deaminase [Streptococcus pneumoniae
           GA41301]
 gi|332077161|gb|EGI87623.1| putative deoxycytidylate deaminase [Streptococcus pneumoniae
           GA17545]
 gi|332202609|gb|EGJ16678.1| putative deoxycytidylate deaminase [Streptococcus pneumoniae
           GA41317]
 gi|332203899|gb|EGJ17966.1| putative deoxycytidylate deaminase [Streptococcus pneumoniae
           GA47368]
 gi|332204754|gb|EGJ18819.1| putative deoxycytidylate deaminase [Streptococcus pneumoniae
           GA47901]
          Length = 155

 Score = 66.9 bits (163), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 31/117 (26%), Positives = 41/117 (35%), Gaps = 29/117 (24%)

Query: 4   GNVFMSCALEEA-----QNAALRNEIPVGAVAVLNNKIISRAGN--------------RN 44
              F + AL  A     + A       VGA+ V +NK+IS   N                
Sbjct: 9   DEYFAAQALLIANRSTCKRAK------VGAILVKDNKVISTGYNGSVSGTEHCIDHECLV 62

Query: 45  RELKDV-TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
            E   V T HAE+ AI  G      +       YVT  PC  C   +     +R+ Y
Sbjct: 63  IEGHCVRTLHAEVNAILQGAERGVPK---GFTAYVTHFPCLNCTKQLLQVGCKRVVY 116


>gi|260770055|ref|ZP_05878988.1| putative deoxycytidylate deaminase [Vibrio furnissii CIP 102972]
 gi|260615393|gb|EEX40579.1| putative deoxycytidylate deaminase [Vibrio furnissii CIP 102972]
 gi|315182578|gb|ADT89491.1| deoxycytidylate deaminase, hypothetical [Vibrio furnissii NCTC
           11218]
          Length = 154

 Score = 66.9 bits (163), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 28/86 (32%), Positives = 36/86 (41%), Gaps = 18/86 (20%)

Query: 26  VGAVAVLNNKIISRAGN---------RNRELKDV----TAHAEILAIRMGCRILSQEILP 72
           VGAV    N+I+S   N          N + +D+    T HAE  AI    R      L 
Sbjct: 27  VGAVITKQNRIVSVGFNGYPHGISDSANTDDRDMKYLKTLHAEENAILFAKR-----DLD 81

Query: 73  EVDLYVTLEPCTMCAAAISLARIRRL 98
             ++YVT  PC  CAA I    I  +
Sbjct: 82  GCEIYVTHFPCPNCAAKIIQTGISAV 107


>gi|260774273|ref|ZP_05883188.1| putative deoxycytidylate deaminase [Vibrio metschnikovii CIP 69.14]
 gi|260611234|gb|EEX36438.1| putative deoxycytidylate deaminase [Vibrio metschnikovii CIP 69.14]
          Length = 157

 Score = 66.9 bits (163), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 28/86 (32%), Positives = 36/86 (41%), Gaps = 18/86 (20%)

Query: 26  VGAVAVLNNKIISRAGN---------RNRELKDV----TAHAEILAIRMGCRILSQEILP 72
           VGAV    N+I+S   N          N + +D+    T HAE  AI    R      L 
Sbjct: 27  VGAVITKQNRIVSVGFNGYPHGISDSANTDDRDMKYLKTLHAEENAILFAKR-----DLD 81

Query: 73  EVDLYVTLEPCTMCAAAISLARIRRL 98
             ++YVT  PC  CAA I    I  +
Sbjct: 82  GCEIYVTHFPCPNCAAKIIQTGISAV 107


>gi|55821713|ref|YP_140155.1| late competence protein required for DNA binding and uptake
           [Streptococcus thermophilus LMG 18311]
 gi|55823633|ref|YP_142074.1| late competence protein required for DNA binding and uptake
           [Streptococcus thermophilus CNRZ1066]
 gi|55737698|gb|AAV61340.1| late competence protein required for DNA binding and uptake
           [Streptococcus thermophilus LMG 18311]
 gi|55739618|gb|AAV63259.1| late competence protein required for DNA binding and uptake
           [Streptococcus thermophilus CNRZ1066]
          Length = 156

 Score = 66.9 bits (163), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 31/122 (25%), Positives = 45/122 (36%), Gaps = 18/122 (14%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKD---------------VTAHAEILAIRMGCRILSQEI 70
           VGAV V + +II+   N      D                T HAE+ A+    +      
Sbjct: 34  VGAVLVKDKRIIATGYNGGVSEADNCNEVGHYMEDGHCIRTVHAEMNALIQCAKEGIST- 92

Query: 71  LPEVDLYVTLEPCTMCAAAISLARIRRLYY-GASNPKGGGIENGTQFYTLATCHHSPEIY 129
               ++YVT  PC  C  A+  A + ++ Y     P    IE   Q       H  PE++
Sbjct: 93  -KNTEIYVTHFPCINCTKALLQAGVVKITYKANYRPHAFAIELMEQKGVSYVQHDVPEVH 151

Query: 130 PG 131
            G
Sbjct: 152 LG 153


>gi|256028497|ref|ZP_05442331.1| deoxycytidylate deaminase [Fusobacterium sp. D11]
 gi|289766417|ref|ZP_06525795.1| deoxycytidylate deaminase [Fusobacterium sp. D11]
 gi|289717972|gb|EFD81984.1| deoxycytidylate deaminase [Fusobacterium sp. D11]
          Length = 161

 Score = 66.9 bits (163), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 29/122 (23%), Positives = 45/122 (36%), Gaps = 31/122 (25%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNK-IISRAGNRNRELKD------- 49
           +   + FM  A+  +  +      P   VGA  V  +K I+    N   +  D       
Sbjct: 6   INWDSYFMGIAILSSMRSKD----PNTQVGACIVNEDKRIVGVGYNGLPKGCDDKEFPWE 61

Query: 50  ----------V-TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98
                         HAE+ AI     + S + L +  +YV L PC  C  AI  + I+ +
Sbjct: 62  RDGEFLNTKYPYVCHAELNAI-----LNSIKSLKDCIIYVALFPCHECTKAIIQSGIKEI 116

Query: 99  YY 100
            Y
Sbjct: 117 VY 118


>gi|229135152|ref|ZP_04263952.1| ComE operon protein 2 [Bacillus cereus BDRD-ST196]
 gi|228648280|gb|EEL04315.1| ComE operon protein 2 [Bacillus cereus BDRD-ST196]
          Length = 188

 Score = 66.9 bits (163), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 23/91 (25%), Positives = 38/91 (41%), Gaps = 17/91 (18%)

Query: 26  VGAVAVLNNKIISRAGNRNRELK-----DV----------TAHAEILAIRMGCRILSQEI 70
           VGA  V + +II+   N + +       D           T HAE+ A+    +  ++  
Sbjct: 31  VGATIVRDKRIIAGGYNGSIKGGVHCIDDGCYVIDNHCVRTIHAEMNALLQCAKFGAKT- 89

Query: 71  LPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
               ++YVT  PC  C  AI  + +  +YY 
Sbjct: 90  -EGAEIYVTHFPCLQCCKAIIQSGVTAVYYA 119


>gi|19705207|ref|NP_602702.1| deoxycytidylate deaminase [Fusobacterium nucleatum subsp. nucleatum
           ATCC 25586]
 gi|296329061|ref|ZP_06871566.1| deoxycytidylate deaminase [Fusobacterium nucleatum subsp. nucleatum
           ATCC 23726]
 gi|19713154|gb|AAL94001.1| Deoxycytidylate deaminase [Fusobacterium nucleatum subsp. nucleatum
           ATCC 25586]
 gi|296153780|gb|EFG94593.1| deoxycytidylate deaminase [Fusobacterium nucleatum subsp. nucleatum
           ATCC 23726]
          Length = 174

 Score = 66.9 bits (163), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 29/122 (23%), Positives = 45/122 (36%), Gaps = 31/122 (25%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNK-IISRAGNRNRELKD------- 49
           +   + FM  A+  +  +      P   VGA  V  +K I+    N   +  D       
Sbjct: 19  INWDSYFMGIAILSSMRSKD----PNTQVGACIVNEDKRIVGVGYNGLPKGCDDKEFPWQ 74

Query: 50  ----------V-TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98
                         HAE+ AI     + S + L +  +YV L PC  C  AI  + I+ +
Sbjct: 75  RDGEFLNTKYPYVCHAELNAI-----LNSIKSLKDCIIYVALFPCHECTKAIIQSGIKEI 129

Query: 99  YY 100
            Y
Sbjct: 130 VY 131


>gi|303320721|ref|XP_003070358.1| Cytidine and deoxycytidylate deaminase zinc-binding domain
           containing protein [Coccidioides posadasii C735 delta
           SOWgp]
 gi|240110048|gb|EER28213.1| Cytidine and deoxycytidylate deaminase zinc-binding domain
           containing protein [Coccidioides posadasii C735 delta
           SOWgp]
          Length = 345

 Score = 66.9 bits (163), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 28/122 (22%), Positives = 37/122 (30%), Gaps = 31/122 (25%)

Query: 4   GNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGN--RNRELK----------- 48
              FM  A   AQ +    R    VG V V + +++S   N                   
Sbjct: 182 DEYFMQLASLAAQRSNCMKRR---VGCVLVKDRRVMSTGYNGTARNTRNCNQGGCPRCNL 238

Query: 49  -DVTA---------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98
              TA         HAE  A+    R    E      LY    PC  C+  I+   I  +
Sbjct: 239 VQGTAQALSTCLCLHAEENALLEAGRERIGE---GCILYCNTCPCLTCSVKIAQLGISEV 295

Query: 99  YY 100
            Y
Sbjct: 296 VY 297


>gi|227503568|ref|ZP_03933617.1| diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Corynebacterium accolens ATCC 49725]
 gi|227075604|gb|EEI13567.1| diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Corynebacterium accolens ATCC 49725]
          Length = 344

 Score = 66.9 bits (163), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 30/108 (27%), Positives = 42/108 (38%), Gaps = 22/108 (20%)

Query: 11  ALEEAQNAAL--RN----EIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
           AL +A  A    R       PVGAV +     ++     +        AHAE++A+R   
Sbjct: 13  ALLQAMQAGAAVRGTTSPNPPVGAVILSATGAVVGIGATQPVGG----AHAEVMALRAAG 68

Query: 64  RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP 105
                         VTLEPC        CA A+  A I R++Y   +P
Sbjct: 69  EKA-----RGGTAVVTLEPCAHTGRTGPCATALIDAGIARVFYLHPDP 111


>gi|294781966|ref|ZP_06747298.1| deoxycytidylate deaminase [Fusobacterium sp. 1_1_41FAA]
 gi|294481777|gb|EFG29546.1| deoxycytidylate deaminase [Fusobacterium sp. 1_1_41FAA]
          Length = 160

 Score = 66.9 bits (163), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 31/122 (25%), Positives = 46/122 (37%), Gaps = 31/122 (25%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNK-IISRAGN-------------R 43
           +   + FM  AL  +  +      P   VGA  V  +K I+    N              
Sbjct: 6   IDWDSYFMGIALLSSMRSKD----PNTQVGACIVNEDKRIVGVGYNGLPKGCEDTDFPWE 61

Query: 44  NR----ELKDV-TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98
                 E K     HAE+ AI     + S + L +  +YV L PC  C+ AI  + I+ +
Sbjct: 62  REGDFLETKYPYVCHAELNAI-----LNSIKSLKDCIIYVALFPCNECSKAIIQSGIKEI 116

Query: 99  YY 100
            Y
Sbjct: 117 VY 118


>gi|238859561|ref|NP_001013904.2| deoxycytidylate deaminase isoform 1 [Rattus norvegicus]
 gi|149021459|gb|EDL78922.1| similar to 6030466N05Rik protein, isoform CRA_a [Rattus norvegicus]
 gi|149021460|gb|EDL78923.1| similar to 6030466N05Rik protein, isoform CRA_a [Rattus norvegicus]
          Length = 184

 Score = 66.9 bits (163), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 32/119 (26%), Positives = 42/119 (35%), Gaps = 31/119 (26%)

Query: 5   NVFMSCALEEAQNAALRNEIP---VGAVAVL-NNKIISRAGN-RNRELKD------VTA- 52
             FM+ A   AQ +      P   VGA  V   NKI+    N       D       TA 
Sbjct: 23  EYFMAVAFLSAQRSKD----PSSQVGACIVNTENKIVGIGYNGMPNGCSDDLLPWRRTAE 78

Query: 53  -----------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
                      HAE+ AI       +   +    +YV L PC  CA  I  A I+ + +
Sbjct: 79  NKLDTKYPYVCHAELNAIMN----KNSADVKGCSMYVALFPCNECAKLIIQAGIKEVIF 133


>gi|238859570|ref|NP_848903.2| deoxycytidylate deaminase [Mus musculus]
 gi|238859573|ref|NP_001154987.1| deoxycytidylate deaminase [Mus musculus]
 gi|238859575|ref|NP_001154988.1| deoxycytidylate deaminase [Mus musculus]
 gi|148703670|gb|EDL35617.1| dCMP deaminase, isoform CRA_a [Mus musculus]
 gi|148703671|gb|EDL35618.1| dCMP deaminase, isoform CRA_a [Mus musculus]
          Length = 184

 Score = 66.9 bits (163), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 32/119 (26%), Positives = 42/119 (35%), Gaps = 31/119 (26%)

Query: 5   NVFMSCALEEAQNAALRNEIP---VGAVAVL-NNKIISRAGN-RNRELKD------VTA- 52
             FM+ A   AQ +      P   VGA  V   NKI+    N       D       TA 
Sbjct: 23  EYFMAVAFLSAQRSKD----PSSQVGACIVNTENKIVGIGYNGMPNGCSDDLLPWRRTAE 78

Query: 53  -----------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
                      HAE+ AI       +   +    +YV L PC  CA  I  A I+ + +
Sbjct: 79  NKLDTKYPYVCHAELNAIMN----KNSADVKGCSMYVALFPCNECAKLIIQAGIKEVIF 133


>gi|62286456|sp|Q5M9G0|DCTD_RAT RecName: Full=Deoxycytidylate deaminase; AltName: Full=dCMP
           deaminase
 gi|62286567|sp|Q8K2D6|DCTD_MOUSE RecName: Full=Deoxycytidylate deaminase; AltName: Full=dCMP
           deaminase
 gi|21619349|gb|AAH31719.1| Dctd protein [Mus musculus]
 gi|26327497|dbj|BAC27492.1| unnamed protein product [Mus musculus]
 gi|26333023|dbj|BAC30229.1| unnamed protein product [Mus musculus]
 gi|56540886|gb|AAH87138.1| DCMP deaminase [Rattus norvegicus]
          Length = 178

 Score = 66.9 bits (163), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 32/119 (26%), Positives = 42/119 (35%), Gaps = 31/119 (26%)

Query: 5   NVFMSCALEEAQNAALRNEIP---VGAVAVL-NNKIISRAGN-RNRELKD------VTA- 52
             FM+ A   AQ +      P   VGA  V   NKI+    N       D       TA 
Sbjct: 17  EYFMAVAFLSAQRSKD----PSSQVGACIVNTENKIVGIGYNGMPNGCSDDLLPWRRTAE 72

Query: 53  -----------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
                      HAE+ AI       +   +    +YV L PC  CA  I  A I+ + +
Sbjct: 73  NKLDTKYPYVCHAELNAIMN----KNSADVKGCSMYVALFPCNECAKLIIQAGIKEVIF 127


>gi|26346577|dbj|BAC36937.1| unnamed protein product [Mus musculus]
          Length = 178

 Score = 66.9 bits (163), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 32/119 (26%), Positives = 42/119 (35%), Gaps = 31/119 (26%)

Query: 5   NVFMSCALEEAQNAALRNEIP---VGAVAVL-NNKIISRAGN-RNRELKD------VTA- 52
             FM+ A   AQ +      P   VGA  V   NKI+    N       D       TA 
Sbjct: 17  EYFMAVAFLSAQRSKD----PSFQVGACIVNTENKIVGIGYNGMPNGCSDDLLPWRRTAE 72

Query: 53  -----------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
                      HAE+ AI       +   +    +YV L PC  CA  I  A I+ + +
Sbjct: 73  NKLDTKYPYVCHAELNAIMN----KNSADVKGCSMYVALFPCNECAKLIIQAGIKEVIF 127


>gi|302392959|ref|YP_003828779.1| CMP/dCMP deaminase zinc-binding protein [Acetohalobium arabaticum
           DSM 5501]
 gi|302205036|gb|ADL13714.1| CMP/dCMP deaminase zinc-binding protein [Acetohalobium arabaticum
           DSM 5501]
          Length = 159

 Score = 66.9 bits (163), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 29/128 (22%), Positives = 41/128 (32%), Gaps = 30/128 (23%)

Query: 4   GNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGNR--------------NREL 47
              FM      A+ +    R    VGA+ V   ++++   N                 E 
Sbjct: 18  DQYFMELTSVVAKRSTCLRRK---VGALLVKEGRVLATGYNGAPSGLKHCSETGCIREER 74

Query: 48  KDVTA---------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98
              +          HAE  AI      L    +    LY T +PC +CA  I  A I  +
Sbjct: 75  NIPSGQRHELCRGLHAEQNAIIQAA--LHGTSIDGATLYCTHQPCVVCAKMIINAGIDEI 132

Query: 99  YYGASNPK 106
             G S P 
Sbjct: 133 IIGGSYPD 140


>gi|33593884|ref|NP_881528.1| putative riboflavin-specific deaminase [Bordetella pertussis Tohama
           I]
 gi|33563958|emb|CAE43220.1| putative riboflavin-specific deaminase [Bordetella pertussis Tohama
           I]
 gi|332383303|gb|AEE68150.1| putative riboflavin-specific deaminase [Bordetella pertussis CS]
          Length = 386

 Score = 66.9 bits (163), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 29/151 (19%), Positives = 50/151 (33%), Gaps = 18/151 (11%)

Query: 2   KKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
                ++  AL  A++        P VG V V + +++     +         HAE+ A+
Sbjct: 7   TDDVSWIRRALALARSVMYSTAPNPRVGCVIVRDGQVLGEGATQPPGG----PHAEVCAL 62

Query: 60  RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113
           R      +   L    +YVTLEPC        C  A+  A   R+     +P       G
Sbjct: 63  REAAARGAS--LAGATVYVTLEPCSHFGRTPPCVDALVAAAPARVVVAMGDPNPRVNGQG 120

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
                 A       +   +    + ++   F
Sbjct: 121 LARLRAAG----IAVTEDVCRDEALELNAGF 147


>gi|289807868|ref|ZP_06538497.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
          deaminase/5-amino-6-(5-phosphoribosylamino)uracil
          reductase [Salmonella enterica subsp. enterica serovar
          Typhi str. AG3]
          Length = 111

 Score = 66.9 bits (163), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 27/97 (27%), Positives = 37/97 (38%), Gaps = 17/97 (17%)

Query: 3  KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
          +   +M+ AL+ AQ      +  P VG V V N  I+    +          HAE+ A+R
Sbjct: 2  QDEFYMARALKLAQRGRFTTHPNPNVGCVIVNNGDIVGEGYHHRAGE----PHAEVHALR 57

Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAAIS 91
          M               YVTLEPC        C  A+ 
Sbjct: 58 MAGAKAKGAT-----AYVTLEPCSHHGRTPPCCDALI 89


>gi|28901047|ref|NP_800702.1| putative deoxycytidylate deaminase [Vibrio parahaemolyticus RIMD
           2210633]
 gi|260362476|ref|ZP_05775409.1| conserved hypothetical protein [Vibrio parahaemolyticus K5030]
 gi|260879896|ref|ZP_05892251.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein
           [Vibrio parahaemolyticus AN-5034]
 gi|260894571|ref|ZP_05903067.1| protein RibG [Vibrio parahaemolyticus Peru-466]
 gi|28809560|dbj|BAC62535.1| putative deoxycytidylate deaminase [Vibrio parahaemolyticus RIMD
           2210633]
 gi|308086410|gb|EFO36105.1| protein RibG [Vibrio parahaemolyticus Peru-466]
 gi|308091689|gb|EFO41384.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein
           [Vibrio parahaemolyticus AN-5034]
 gi|308113341|gb|EFO50881.1| conserved hypothetical protein [Vibrio parahaemolyticus K5030]
          Length = 154

 Score = 66.9 bits (163), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 27/86 (31%), Positives = 34/86 (39%), Gaps = 18/86 (20%)

Query: 26  VGAVAVLNNKIISRAGN-------------RNRELKDVTAHAEILAIRMGCRILSQEILP 72
           VGAV    N+I+S   N                     T HAE  AI     + S+  L 
Sbjct: 27  VGAVITNQNRIVSVGFNGYPHGVSDSVDTDERELKYLKTLHAEENAI-----LFSKRDLD 81

Query: 73  EVDLYVTLEPCTMCAAAISLARIRRL 98
             D++VT  PC  CAA I    I R+
Sbjct: 82  GCDIWVTHFPCPNCAAKIIQTGISRV 107


>gi|302773850|ref|XP_002970342.1| hypothetical protein SELMODRAFT_171495 [Selaginella moellendorffii]
 gi|300161858|gb|EFJ28472.1| hypothetical protein SELMODRAFT_171495 [Selaginella moellendorffii]
          Length = 378

 Score = 66.9 bits (163), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 31/127 (24%), Positives = 50/127 (39%), Gaps = 18/127 (14%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEI-P-VGAVAVLN-NKIISRAGNRNRELKDVTAHAEIL 57
           ++  + +M   +E A+    R    P VG + V N  +I+ R  +          HAE+ 
Sbjct: 25  LRDDSDYMRQCVELARRGLGRTSPNPMVGCLIVDNAGEIVGRGFHPRAGE----PHAEVF 80

Query: 58  AIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIE 111
           A+R                YV+LEPC        C+ A+  AR+RR+  G  +P      
Sbjct: 81  ALREAGSKAH-----GSTAYVSLEPCDHVGRTPPCSRALVAARVRRVVVGTVDPNPLVAG 135

Query: 112 NGTQFYT 118
            G +   
Sbjct: 136 KGVERLR 142


>gi|197119397|ref|YP_002139824.1| deoxycytidylate deaminase [Geobacter bemidjiensis Bem]
 gi|253699854|ref|YP_003021043.1| dCMP deaminase [Geobacter sp. M21]
 gi|197088757|gb|ACH40028.1| deoxycytidylate deaminase [Geobacter bemidjiensis Bem]
 gi|251774704|gb|ACT17285.1| dCMP deaminase [Geobacter sp. M21]
          Length = 151

 Score = 66.9 bits (163), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 21/104 (20%), Positives = 37/104 (35%), Gaps = 27/104 (25%)

Query: 26  VGAVAVLNNKIISRAGN--------------RNRELKDVTA---------HAEILAIRMG 62
           VGAV V +  I++   N                 ++   +          HAE  AI   
Sbjct: 28  VGAVLVKDKNILATGYNGAPSGTAHCLDIGCLREKMGIPSGERHELCRGLHAEQNAIIQA 87

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY--GASN 104
            +  +   +    LY    PC +C+  +  + I+R+ Y  G  +
Sbjct: 88  AKHGTS--IEGATLYCNTMPCIICSKMVINSGIKRVVYLSGYPD 129


>gi|42518285|ref|NP_964215.1| ComE operon protein 2. [Lactobacillus johnsonii NCC 533]
 gi|227888945|ref|ZP_04006750.1| competence protein ComEB [Lactobacillus johnsonii ATCC 33200]
 gi|41582569|gb|AAS08181.1| ComE operon protein 2 [Lactobacillus johnsonii NCC 533]
 gi|227850533|gb|EEJ60619.1| competence protein ComEB [Lactobacillus johnsonii ATCC 33200]
 gi|329666595|gb|AEB92543.1| dCMP deaminase [Lactobacillus johnsonii DPC 6026]
          Length = 162

 Score = 66.5 bits (162), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 28/120 (23%), Positives = 50/120 (41%), Gaps = 23/120 (19%)

Query: 1   MKKG-----NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELK----DV- 50
           M +        FM  AL  AQ +     + VG+V V ++++I+   N +   +    DV 
Sbjct: 1   MTRDRIPWKQYFMMQALVIAQRSTCDRAL-VGSVLVKDDRMIATGYNGSVSGQPHCDDVG 59

Query: 51  ----------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
                     T H+E+ A+    +          ++YVT  PC  C+  +  A I+++ Y
Sbjct: 60  HLMVDGHCVRTIHSEMNALIQCAKNGIST--EGTEIYVTYFPCFNCSKCLVQAGIKKINY 117


>gi|218680824|ref|ZP_03528721.1| putative purine deaminase protein [Rhizobium etli CIAT 894]
          Length = 91

 Score = 66.5 bits (162), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 19/80 (23%), Positives = 32/80 (40%), Gaps = 5/80 (6%)

Query: 71  LPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG-IENGTQFYTLATCHHSPEIY 129
           L +  LY + EPC MC+ AI  + I  + +  S  + G     G    + A       I 
Sbjct: 5   LADCTLYTSTEPCAMCSGAIYWSGIGHMVFACSETRLGEMAGVGLNVPSRAVLQTGARIV 64

Query: 130 PGI----SEQRSRQIIQDFF 145
             +     E  +  + Q+F+
Sbjct: 65  TVVGPTNLEDEAATVHQEFW 84


>gi|257076159|ref|ZP_05570520.1| deaminase [Ferroplasma acidarmanus fer1]
          Length = 172

 Score = 66.5 bits (162), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 31/160 (19%), Positives = 48/160 (30%), Gaps = 38/160 (23%)

Query: 4   GNVFMSCALEEAQNA---ALRNEIPVGAVAVLNNKIISRAGN------------------ 42
              FM  A   A  +     +    VGAV V +N +++   N                  
Sbjct: 11  DEYFMRMAYLAASRSNCTRRK----VGAVIVRDNNVLATGYNGPPSHTVNCDIVGCIRDE 66

Query: 43  ------RNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIR 96
                    EL     HAE  AI      ++   +    +YVT  PC +C+  I  + I 
Sbjct: 67  LNVPSGERHELCRGL-HAEQNAIIQAA--VNGSSIKGSKIYVTTHPCVVCSKMIMNSSIE 123

Query: 97  RLYYGASNPKGGG----IENGTQFYTLATCHHSPEIYPGI 132
            + +    P        +E+              E   GI
Sbjct: 124 EIIFAEGYPDDLAELMLLESNITIRKFNLPDPEVESIIGI 163


>gi|322385723|ref|ZP_08059367.1| competence protein comEB [Streptococcus cristatus ATCC 51100]
 gi|321270461|gb|EFX53377.1| competence protein comEB [Streptococcus cristatus ATCC 51100]
          Length = 156

 Score = 66.5 bits (162), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 31/117 (26%), Positives = 41/117 (35%), Gaps = 29/117 (24%)

Query: 4   GNVFMSCALEEA-----QNAALRNEIPVGAVAVLNNKIISRAGNRNRELK---------- 48
              F + AL  A     + A       VGAV V +NK+IS   N +              
Sbjct: 10  DEYFAAQALLIANRSTCKRAK------VGAVLVKDNKVISTGYNGSVSGTEHCIDHECLV 63

Query: 49  -DV----TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
            D     T HAE+ AI  G      +       YVT  PC  C   +     +R+ Y
Sbjct: 64  IDGHCVRTLHAEVNAILQGAERGVPK---GFTAYVTHFPCLNCTKQLLQVGCKRVVY 117


>gi|312197775|ref|YP_004017836.1| CMP/dCMP deaminase zinc-binding protein [Frankia sp. EuI1c]
 gi|311229111|gb|ADP81966.1| CMP/dCMP deaminase zinc-binding protein [Frankia sp. EuI1c]
          Length = 205

 Score = 66.5 bits (162), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 28/153 (18%), Positives = 47/153 (30%), Gaps = 20/153 (13%)

Query: 8   MSCALEEAQNAALRN-EIPVGAVAVLN--NKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           M      A          P  AV       +I +   N   +    + HAE++A+     
Sbjct: 41  MRLVHRLADRNHREGHGGPFAAVVASPDTGEIHAAGVNLVLDTGLSSMHAEVVALSFAQA 100

Query: 65  ILSQEILPEV----DLYVTLEPCTMCAAAISLARIRRLYY-GASNPKGGGIENGTQFYTL 119
            L +  L       +L V   PC MC  A   + ++ L   G+ +     IE  T F   
Sbjct: 101 RLGRWDLSAAGTPVELVVNWRPCVMCYGATMWSGVQLLTIAGSGDE----IETLTGFDEG 156

Query: 120 A--------TCHHSPEIYPGISEQRSRQIIQDF 144
                           +   I    + ++  D+
Sbjct: 157 PMREDWAEQFAGRGITVRTDILRDEALKVFADY 189


>gi|61742819|ref|NP_001912.2| deoxycytidylate deaminase isoform b [Homo sapiens]
 gi|114597027|ref|XP_001160760.1| PREDICTED: similar to DCMP deaminase isoform 3 [Pan troglodytes]
 gi|114597029|ref|XP_001160671.1| PREDICTED: deoxycytidylate deaminase isoform 2 [Pan troglodytes]
 gi|114597031|ref|XP_001160617.1| PREDICTED: similar to DCMP deaminase isoform 1 [Pan troglodytes]
 gi|23503055|sp|P32321|DCTD_HUMAN RecName: Full=Deoxycytidylate deaminase; AltName: Full=dCMP
           deaminase
 gi|886280|gb|AAC37579.1| deoxycytidylate deaminase [Homo sapiens]
 gi|119625105|gb|EAX04700.1| dCMP deaminase, isoform CRA_c [Homo sapiens]
 gi|119625106|gb|EAX04701.1| dCMP deaminase, isoform CRA_c [Homo sapiens]
 gi|189053781|dbj|BAG36033.1| unnamed protein product [Homo sapiens]
          Length = 178

 Score = 66.5 bits (162), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 32/116 (27%), Positives = 42/116 (36%), Gaps = 25/116 (21%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGN-RNRELKD------VTA---- 52
             FM+ A   AQ +   N   VGA  V   NKI+    N       D       TA    
Sbjct: 17  EYFMAVAFLSAQRSKDPNSQ-VGACIVNSENKIVGIGYNGMPNGCSDDVLPWRRTAENKL 75

Query: 53  --------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
                   HAE+ AI       +   +    +YV L PC  CA  I  A I+ + +
Sbjct: 76  DTKYPYVCHAELNAIMN----KNSTDVKGCSMYVALFPCNECAKLIIQAGIKEVIF 127


>gi|294142299|ref|YP_003558277.1| deoxycytidylate deaminase [Shewanella violacea DSS12]
 gi|293328768|dbj|BAJ03499.1| deoxycytidylate deaminase, putative [Shewanella violacea DSS12]
          Length = 148

 Score = 66.5 bits (162), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 24/86 (27%), Positives = 32/86 (37%), Gaps = 18/86 (20%)

Query: 26  VGAVAVLNNKIISRAGN-------------RNRELKDVTAHAEILAIRMGCRILSQEILP 72
           VGAV   +N+I+S   N                     T HAE  AI    R      L 
Sbjct: 26  VGAVITEDNRIVSLGFNGYPHGISDSAETDNREMKLLKTLHAEENAILYAKR-----DLS 80

Query: 73  EVDLYVTLEPCTMCAAAISLARIRRL 98
             +++VT  PC  CAA I    +  +
Sbjct: 81  GCEIWVTHFPCPNCAAKIIQTGLSTV 106


>gi|167625262|ref|YP_001675556.1| zinc-binding CMP/dCMP deaminase [Shewanella halifaxensis HAW-EB4]
 gi|167355284|gb|ABZ77897.1| CMP/dCMP deaminase zinc-binding [Shewanella halifaxensis HAW-EB4]
          Length = 143

 Score = 66.5 bits (162), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 24/86 (27%), Positives = 32/86 (37%), Gaps = 18/86 (20%)

Query: 26  VGAVAVLNNKIISRAGN-------------RNRELKDVTAHAEILAIRMGCRILSQEILP 72
           VGAV   +N+I+S   N                     T HAE  AI    R      L 
Sbjct: 27  VGAVITEDNRIVSLGFNGYPHGISDSAETDNREMKLLKTLHAEENAILYAKR-----DLS 81

Query: 73  EVDLYVTLEPCTMCAAAISLARIRRL 98
             +++VT  PC  CAA I    +  +
Sbjct: 82  GCEIWVTHFPCPNCAAKIIQTGLSTV 107


>gi|163748467|ref|ZP_02155721.1| putative deoxycytidylate deaminase [Shewanella benthica KT99]
 gi|161332045|gb|EDQ02722.1| putative deoxycytidylate deaminase [Shewanella benthica KT99]
          Length = 149

 Score = 66.5 bits (162), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 24/86 (27%), Positives = 32/86 (37%), Gaps = 18/86 (20%)

Query: 26  VGAVAVLNNKIISRAGN-------------RNRELKDVTAHAEILAIRMGCRILSQEILP 72
           VGAV   +N+I+S   N                     T HAE  AI    R      L 
Sbjct: 27  VGAVITEDNRIVSLGFNGYPHGISDSAETDNREMKLLKTLHAEENAILYAKR-----DLS 81

Query: 73  EVDLYVTLEPCTMCAAAISLARIRRL 98
             +++VT  PC  CAA I    +  +
Sbjct: 82  GCEIWVTHFPCPNCAAKIIQTGLSTV 107


>gi|157963093|ref|YP_001503127.1| zinc-binding CMP/dCMP deaminase [Shewanella pealeana ATCC 700345]
 gi|157848093|gb|ABV88592.1| CMP/dCMP deaminase zinc-binding [Shewanella pealeana ATCC 700345]
          Length = 144

 Score = 66.5 bits (162), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 24/86 (27%), Positives = 32/86 (37%), Gaps = 18/86 (20%)

Query: 26  VGAVAVLNNKIISRAGN-------------RNRELKDVTAHAEILAIRMGCRILSQEILP 72
           VGAV   +N+I+S   N                     T HAE  AI    R      L 
Sbjct: 27  VGAVITEDNRIVSLGFNGYPHGISDSAETDNREMKLLKTLHAEENAILYAKR-----DLS 81

Query: 73  EVDLYVTLEPCTMCAAAISLARIRRL 98
             +++VT  PC  CAA I    +  +
Sbjct: 82  GCEIWVTHFPCPNCAAKIIQTGLSTV 107


>gi|322376947|ref|ZP_08051440.1| cytidine and deoxycytidylate deaminase family protein
           [Streptococcus sp. M334]
 gi|321282754|gb|EFX59761.1| cytidine and deoxycytidylate deaminase family protein
           [Streptococcus sp. M334]
          Length = 155

 Score = 66.5 bits (162), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 31/117 (26%), Positives = 41/117 (35%), Gaps = 29/117 (24%)

Query: 4   GNVFMSCALEEA-----QNAALRNEIPVGAVAVLNNKIISRAGN--------------RN 44
              F + AL  A     + A       VGA+ V +NK+IS   N                
Sbjct: 9   DEYFAAQALLIANRSTCKRAK------VGAILVKDNKVISTGYNGSVSGTEHCIDHECLV 62

Query: 45  RELKDV-TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
            E   V T HAE+ AI  G      +       YVT  PC  C   +     +R+ Y
Sbjct: 63  IEGHCVRTLHAEVNAILQGAERGVPK---GFTAYVTHFPCLNCTKQLLQVGCKRVVY 116


>gi|261212850|ref|ZP_05927134.1| deoxycytidylate deaminase [Vibrio sp. RC341]
 gi|260837915|gb|EEX64592.1| deoxycytidylate deaminase [Vibrio sp. RC341]
          Length = 161

 Score = 66.5 bits (162), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 27/86 (31%), Positives = 36/86 (41%), Gaps = 18/86 (20%)

Query: 26  VGAVAVLNNKIISRAGN---------RNRELKDV----TAHAEILAIRMGCRILSQEILP 72
           VGAV    N+I+S   N          + + +D+    T HAE  AI    R      L 
Sbjct: 27  VGAVITKQNRIVSVGFNGYPHGISDSASTDDRDMKYLKTLHAEENAILFAKR-----DLD 81

Query: 73  EVDLYVTLEPCTMCAAAISLARIRRL 98
             ++YVT  PC  CAA I    I  +
Sbjct: 82  GCEIYVTHFPCPNCAAKIIQTGIAAV 107


>gi|327301817|ref|XP_003235601.1| deoxycytidylate deaminase [Trichophyton rubrum CBS 118892]
 gi|326462953|gb|EGD88406.1| deoxycytidylate deaminase [Trichophyton rubrum CBS 118892]
          Length = 348

 Score = 66.5 bits (162), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 28/122 (22%), Positives = 37/122 (30%), Gaps = 31/122 (25%)

Query: 4   GNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGN-------RNRELKDV---- 50
              FM  A   AQ +    R    VG V V +N+++S   N          E        
Sbjct: 187 DQYFMQLASLAAQRSNCMKRR---VGCVIVKDNRVMSTGYNGTPRNMKNCNEGGCPRCNL 243

Query: 51  ------------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98
                         HAE  A+    R    E      LY    PC  C+  I+   I  +
Sbjct: 244 GQAGGTVLSTCLCMHAEENALLEAGRQRIGE---GSILYCDTCPCLTCSVKIAQLGISEV 300

Query: 99  YY 100
            Y
Sbjct: 301 VY 302


>gi|50312303|ref|XP_456184.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
 gi|49645320|emb|CAG98892.1| KLLA0F24794p [Kluyveromyces lactis]
          Length = 597

 Score = 66.5 bits (162), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 37/151 (24%), Positives = 58/151 (38%), Gaps = 22/151 (14%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP----VGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56
           ++    FM  A++EA+N     E      VGA+ V    I+S   +R         HAE 
Sbjct: 442 IEPHRKFMELAIDEARN---CGETQTAFNVGALLVNGTDILSTGYSRELPGN---THAEQ 495

Query: 57  LAIRMGCRILSQEILPEVD-LYVTLEPC-------TMCAAAISLA--RIRRLYYGASNPK 106
            A+           LP+   +Y T+EPC         C   I      I+ ++ G   P 
Sbjct: 496 CALDKYFTKSEGAKLPDGTIIYTTMEPCSLRLSGNLPCVDRIIQTTGAIKTVFVGVMEPD 555

Query: 107 GGGIENGTQFYTLATCHHSPEIYPGISEQRS 137
              ++N T ++ LA       + PG  E+  
Sbjct: 556 I-FVKNNTSYHKLAQYGIDYILIPGY-EEEC 584


>gi|307708898|ref|ZP_07645358.1| comE operon protein 2 [Streptococcus mitis SK564]
 gi|307620234|gb|EFN99350.1| comE operon protein 2 [Streptococcus mitis SK564]
          Length = 155

 Score = 66.5 bits (162), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 31/117 (26%), Positives = 41/117 (35%), Gaps = 29/117 (24%)

Query: 4   GNVFMSCALEEA-----QNAALRNEIPVGAVAVLNNKIISRAGN--------------RN 44
              F + AL  A     + A       VGA+ V +NK+IS   N                
Sbjct: 9   DEYFAAQALLIANRSTCKRAK------VGAILVKDNKVISTGYNGSVSGTEHCIDHECLV 62

Query: 45  RELKDV-TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
            E   V T HAE+ AI  G      +       YVT  PC  C   +     +R+ Y
Sbjct: 63  IEGHCVRTLHAEVNAILQGAERGVPK---GFTAYVTHFPCLNCTKQLLQVGCKRVVY 116


>gi|295093723|emb|CBK82814.1| Deoxycytidylate deaminase [Coprococcus sp. ART55/1]
          Length = 159

 Score = 66.5 bits (162), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 31/122 (25%), Positives = 43/122 (35%), Gaps = 30/122 (24%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAV-LNNKIISRAGNRNRELKD------- 49
           +     FM  A+  A+ +      P   VGA  V  NN+I+S   N      D       
Sbjct: 7   ISWDQYFMGIAMMSAERSKD----PSTQVGACIVDKNNRILSMGYNGMPAGCDDDTMPWG 62

Query: 50  ----VTA-------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98
                         HAE+ +I           L +  +Y TL PC  CA AI    I+ +
Sbjct: 63  KSGAPLDNKYFYVCHAELNSILN----YRGGNLKDAIIYSTLFPCNECAKAIIQCGIKEV 118

Query: 99  YY 100
            Y
Sbjct: 119 VY 120


>gi|116628878|ref|YP_814050.1| deoxycytidylate deaminase [Lactobacillus gasseri ATCC 33323]
 gi|238852844|ref|ZP_04643249.1| ComE operon protein 2 [Lactobacillus gasseri 202-4]
 gi|268318770|ref|YP_003292426.1| hypothetical protein FI9785_275 [Lactobacillus johnsonii FI9785]
 gi|282852543|ref|ZP_06261885.1| putative ComE operon protein 2 [Lactobacillus gasseri 224-1]
 gi|300362471|ref|ZP_07058647.1| competence protein ComEB [Lactobacillus gasseri JV-V03]
 gi|116094460|gb|ABJ59612.1| Deoxycytidylate deaminase [Lactobacillus gasseri ATCC 33323]
 gi|238834538|gb|EEQ26770.1| ComE operon protein 2 [Lactobacillus gasseri 202-4]
 gi|262397145|emb|CAX66159.1| conserved hypothetical protein [Lactobacillus johnsonii FI9785]
 gi|282556285|gb|EFB61905.1| putative ComE operon protein 2 [Lactobacillus gasseri 224-1]
 gi|300353462|gb|EFJ69334.1| competence protein ComEB [Lactobacillus gasseri JV-V03]
          Length = 162

 Score = 66.5 bits (162), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 28/120 (23%), Positives = 50/120 (41%), Gaps = 23/120 (19%)

Query: 1   MKKG-----NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELK----DV- 50
           M +        FM  AL  AQ +     + VG+V V ++++I+   N +   +    DV 
Sbjct: 1   MTRDRIPWKQYFMMQALVIAQRSTCDRAL-VGSVLVKDDRMIATGYNGSVSGQPHCDDVG 59

Query: 51  ----------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
                     T H+E+ A+    +          ++YVT  PC  C+  +  A I+++ Y
Sbjct: 60  HLMVDGHCVRTIHSEMNALIQCAKNGIST--EGTEIYVTYFPCFNCSKCLVQAGIKKINY 117


>gi|326474735|gb|EGD98744.1| deoxycytidylate deaminase [Trichophyton tonsurans CBS 112818]
 gi|326484864|gb|EGE08874.1| deoxycytidylate deaminase [Trichophyton equinum CBS 127.97]
          Length = 348

 Score = 66.5 bits (162), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 28/122 (22%), Positives = 37/122 (30%), Gaps = 31/122 (25%)

Query: 4   GNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGN-------RNRELKDV---- 50
              FM  A   AQ +    R    VG V V +N+++S   N          E        
Sbjct: 187 DQYFMQLASLAAQRSNCMKRR---VGCVIVKDNRVMSTGYNGTPRNMKNCNEGGCPRCNL 243

Query: 51  ------------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98
                         HAE  A+    R    E      LY    PC  C+  I+   I  +
Sbjct: 244 GQAGGTVLSTCLCMHAEENALLEAGRQRIGE---GSILYCDTCPCLTCSVKIAQLGISEV 300

Query: 99  YY 100
            Y
Sbjct: 301 VY 302


>gi|150021636|ref|YP_001306990.1| CMP/dCMP deaminase, zinc-binding [Thermosipho melanesiensis BI429]
 gi|149794157|gb|ABR31605.1| CMP/dCMP deaminase, zinc-binding [Thermosipho melanesiensis BI429]
          Length = 170

 Score = 66.5 bits (162), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 25/120 (20%), Positives = 46/120 (38%), Gaps = 26/120 (21%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNR--------------NRELKD 49
              F+  +L  A  +       VGA+ V + +I+S   N+                +L+ 
Sbjct: 23  DEYFLRISLIIASRSTCI-HRKVGALIVKDKRILSTGYNQPPSGFPHCNNIPCIRDDLRI 81

Query: 50  VTA---------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
            +          HAE  A+    +           +Y+T +PC++CA  I  A I+R+ +
Sbjct: 82  PSGKNQEICYALHAEQNALMQAAKFGISTN--NSTMYITHKPCSVCARLIINAGIKRVVF 139


>gi|325119282|emb|CBZ54836.1| putative cytidine and deoxycytidylate deaminase zinc-binding region
           domain-containing protein [Neospora caninum Liverpool]
          Length = 693

 Score = 66.5 bits (162), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 16/63 (25%), Positives = 27/63 (42%), Gaps = 1/63 (1%)

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
                     +Y + EPC +CA A+  +RI+ L +   N   GGI  G + +     +H 
Sbjct: 616 DGNYYCQGCVVYCSHEPCVLCAMALIHSRIKLLVFAHDNKVHGGITRG-RLHLDRRLNHG 674

Query: 126 PEI 128
             +
Sbjct: 675 YRV 677


>gi|320037881|gb|EFW19817.1| deoxycytidylate deaminase [Coccidioides posadasii str. Silveira]
          Length = 352

 Score = 66.5 bits (162), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 28/122 (22%), Positives = 37/122 (30%), Gaps = 31/122 (25%)

Query: 4   GNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGN--RNRELK----------- 48
              FM  A   AQ +    R    VG V V + +++S   N                   
Sbjct: 189 DEYFMQLASLAAQRSNCMKRR---VGCVLVKDRRVMSTGYNGTARNTRNCNQGGCPRCNL 245

Query: 49  -DVTA---------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98
              TA         HAE  A+    R    E      LY    PC  C+  I+   I  +
Sbjct: 246 VQGTAQALSTCLCLHAEENALLEAGRERIGE---GCILYCNTCPCLTCSVKIAQLGISEV 302

Query: 99  YY 100
            Y
Sbjct: 303 VY 304


>gi|302769374|ref|XP_002968106.1| hypothetical protein SELMODRAFT_169709 [Selaginella moellendorffii]
 gi|300163750|gb|EFJ30360.1| hypothetical protein SELMODRAFT_169709 [Selaginella moellendorffii]
          Length = 375

 Score = 66.5 bits (162), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 31/127 (24%), Positives = 50/127 (39%), Gaps = 18/127 (14%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEI-P-VGAVAVLN-NKIISRAGNRNRELKDVTAHAEIL 57
           ++  + +M   +E A+    R    P VG + V N  +I+ R  +          HAE+ 
Sbjct: 22  LRDDSDYMRQCVELARRGLGRTSPNPMVGCLIVDNAGEIVGRGFHPRAGE----PHAEVF 77

Query: 58  AIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIE 111
           A+R                YV+LEPC        C+ A+  AR+RR+  G  +P      
Sbjct: 78  ALREAGSKAH-----GSTAYVSLEPCDHVGRTPPCSRALVAARVRRVVVGTVDPNPLVAG 132

Query: 112 NGTQFYT 118
            G +   
Sbjct: 133 KGVERLR 139


>gi|296333283|ref|ZP_06875736.1| putative enzyme associated to DNA transport (competence) [Bacillus
           subtilis subsp. spizizenii ATCC 6633]
 gi|305675213|ref|YP_003866885.1| hypothetical protein BSUW23_12690 [Bacillus subtilis subsp.
           spizizenii str. W23]
 gi|296149481|gb|EFG90377.1| putative enzyme associated to DNA transport (competence) [Bacillus
           subtilis subsp. spizizenii ATCC 6633]
 gi|305413457|gb|ADM38576.1| putative enzyme associated with DNA transport (competence)
           [Bacillus subtilis subsp. spizizenii str. W23]
          Length = 189

 Score = 66.5 bits (162), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 29/125 (23%), Positives = 46/125 (36%), Gaps = 25/125 (20%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRE----------- 46
           +     FM+ +   A  +      P   VGA  V + ++I+   N +             
Sbjct: 4   ISWNQYFMAQSHLLALRSTC----PRLSVGATIVRDKRMIAGGYNGSIAGGVHCADEGCL 59

Query: 47  ----LKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGA 102
                   T HAE+ AI    +          ++YVT  PC  C  +I  A I+ +YY A
Sbjct: 60  MIDDHCARTIHAEMNAILQCSKFGVPTD--GAEIYVTHYPCIQCCKSIIQAGIKTVYY-A 116

Query: 103 SNPKG 107
            + K 
Sbjct: 117 EDYKT 121


>gi|294501314|ref|YP_003565014.1| ComE operon protein [Bacillus megaterium QM B1551]
 gi|294351251|gb|ADE71580.1| ComE operon protein [Bacillus megaterium QM B1551]
          Length = 188

 Score = 66.5 bits (162), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 27/116 (23%), Positives = 46/116 (39%), Gaps = 18/116 (15%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELK-----------D 49
           +     FM+ +   A  +     + VGA  V + +II+   N +               D
Sbjct: 4   ISWDQYFMAQSHLLALRSTCER-LAVGATVVRDKRIIAGGYNGSISGGVHCADEGCYVID 62

Query: 50  V----TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
                T HAE+ A+    +   +    + ++YVT  PC  C  A+  A I+ +YY 
Sbjct: 63  GHCVRTVHAEVNALLQCAKFGVKT--EDAEVYVTHFPCLNCCKALIQAGIKTVYYA 116


>gi|315641043|ref|ZP_07896126.1| ComE operon protein ComEB [Enterococcus italicus DSM 15952]
 gi|315483212|gb|EFU73725.1| ComE operon protein ComEB [Enterococcus italicus DSM 15952]
          Length = 165

 Score = 66.5 bits (162), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 27/113 (23%), Positives = 44/113 (38%), Gaps = 20/113 (17%)

Query: 4   GNVFMSCALEEAQNAA-LRNEIPVGAVAVLNNKIISRAGNRNRE---------------L 47
              FM+ A+  +  +   R E  VGA  V   +II+   N +                  
Sbjct: 9   DQYFMAQAVLLSLRSTCTRLE--VGATLVKEKRIIAGGYNGSVSGDTHCIDEGCAMVDGH 66

Query: 48  KDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
              T HAE+ A+    +          ++YVT  PC  C  +I  A I++++Y
Sbjct: 67  CIRTIHAEMNALLQCAKFGISTN--GAEIYVTHFPCLQCTKSILQAGIKKIHY 117


>gi|225866307|ref|YP_002751685.1| ComE operon protein 2 [Bacillus cereus 03BB102]
 gi|225787758|gb|ACO27975.1| ComE operon protein 2 [Bacillus cereus 03BB102]
          Length = 185

 Score = 66.5 bits (162), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 25/91 (27%), Positives = 38/91 (41%), Gaps = 17/91 (18%)

Query: 26  VGAVAVLNNKIISRAGNRNRELK-----DV----------TAHAEILAIRMGCRILSQEI 70
           VGA  V + +II+   N + +       D           T HAE+ A+    +   +  
Sbjct: 28  VGATIVRDKRIIAGGYNGSIKGGVHCIDDGCYVIDNHCVRTIHAEMNALLQCAKFGVKT- 86

Query: 71  LPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
             E ++YVT  PC  C  AI  + I  +YY 
Sbjct: 87  -EEAEIYVTHFPCLQCCKAIIQSGITAVYYA 116


>gi|206602767|gb|EDZ39248.1| Riboflavin biosynthesis protein RibD [Leptospirillum sp. Group II
           '5-way CG']
          Length = 388

 Score = 66.5 bits (162), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 39/157 (24%), Positives = 60/157 (38%), Gaps = 29/157 (18%)

Query: 1   MKKGNV-FMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAE 55
           M +    FM+ AL+ A  A  R+++   P VGAV V   +++ R  +    L     HAE
Sbjct: 1   MLRDEKVFMAMALDLAMMA--RDDVAPNPRVGAVVVRKGRVVGRGYHERPGL----PHAE 54

Query: 56  ILAIRMGC-RILSQEILPEVDLYVTLEPC-------TMCAAAISLARIRRLYYGASNPKG 107
           +LA+R    R           LYV LEPC         C   I  + I R+    S+P  
Sbjct: 55  VLALREAGERA------RGATLYVNLEPCCHLNKRTPPCTREILSSGIGRVVISLSDPNP 108

Query: 108 GGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
                G              +  G+   ++  + + F
Sbjct: 109 HVNGKGILELRDGGIP----VETGLLAPQAFAVNRGF 141


>gi|154316392|ref|XP_001557517.1| hypothetical protein BC1G_04127 [Botryotinia fuckeliana B05.10]
 gi|150845927|gb|EDN21120.1| hypothetical protein BC1G_04127 [Botryotinia fuckeliana B05.10]
          Length = 393

 Score = 66.5 bits (162), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 37/167 (22%), Positives = 60/167 (35%), Gaps = 56/167 (33%)

Query: 5   NVFMSCALEEAQ--NAALRNEIPVGAVAV--LNN--KIISRAGNRN------RELKDVTA 52
             +M  A E A+  N     E  +GAV V   +   +I++ AG+            +VTA
Sbjct: 185 EKYMDLAAEVARSSNVVGIGEQ-IGAVVVERKSGAARILAVAGDARWMKWPWAGSGNVTA 243

Query: 53  HAEI-------------------------LAIRM------------------GCRILSQE 69
           HA +                          A+                        +   
Sbjct: 244 HAALRVIAMVADGIKVQEEHKAGKEPEANNALEQKLIFRDQPLDTLEAKHHNSAEWIDGY 303

Query: 70  ILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116
           +  E++LY+T EPC MC+ AI  +R  R+ +G   PK GG+   ++ 
Sbjct: 304 LCHELELYITHEPCVMCSMAIVHSRFGRVIFGQRMPKTGGLCADSEL 350


>gi|237743385|ref|ZP_04573866.1| deoxycytidylate deaminase [Fusobacterium sp. 7_1]
 gi|229433164|gb|EEO43376.1| deoxycytidylate deaminase [Fusobacterium sp. 7_1]
          Length = 161

 Score = 66.5 bits (162), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 29/122 (23%), Positives = 44/122 (36%), Gaps = 31/122 (25%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNK-IISRAGNRNRELKD------- 49
           +   + FM  A+  +  +      P   VGA  V  +K I+    N   +  D       
Sbjct: 6   INWDSYFMGVAILSSMRSKD----PNTQVGACIVNEDKRIVGVGYNGLPKGCDDKEFPWE 61

Query: 50  ----------V-TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98
                         HAE+ AI     + S + L    +YV L PC  C  AI  + I+ +
Sbjct: 62  RDGEFLNTKYPYVCHAELNAI-----LNSIKSLKNCTIYVALFPCHECTKAIIQSGIKEI 116

Query: 99  YY 100
            Y
Sbjct: 117 VY 118


>gi|229169074|ref|ZP_04296789.1| ComE operon protein 2 [Bacillus cereus AH621]
 gi|228614302|gb|EEK71412.1| ComE operon protein 2 [Bacillus cereus AH621]
          Length = 188

 Score = 66.5 bits (162), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 24/91 (26%), Positives = 39/91 (42%), Gaps = 17/91 (18%)

Query: 26  VGAVAVLNNKIISRAGNRNRELK-----DV----------TAHAEILAIRMGCRILSQEI 70
           VGA  V + +II+   N + +       D           T HAE+ A+    +  ++  
Sbjct: 31  VGATIVRDKRIIAGGYNGSIKGGVHCIDDGCYVIDNHCVRTIHAEMNALLQCAKFGAKT- 89

Query: 71  LPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
             E ++YVT  PC  C  AI  + +  +YY 
Sbjct: 90  -EEAEIYVTHFPCLQCCKAIIQSGVTAVYYA 119


>gi|149369588|ref|ZP_01889440.1| putative deoxycytidylate deaminase [unidentified eubacterium SCB49]
 gi|149357015|gb|EDM45570.1| putative deoxycytidylate deaminase [unidentified eubacterium SCB49]
          Length = 142

 Score = 66.5 bits (162), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 33/131 (25%), Positives = 49/131 (37%), Gaps = 23/131 (17%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRN-----RELKDV------ 50
           K    ++  A E ++ +    +  VGA+ V  N IIS   N        E +D       
Sbjct: 8   KYDVAYLRMAKEWSKLSHCNRKQ-VGALIVKGNMIISDGYNGTPTGFDNECEDCDNNTHW 66

Query: 51  -TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY--GASNPKG 107
              HAE  AI                LY+TL PC  C+  I  + I+R+ Y  G  +   
Sbjct: 67  YVLHAEANAILKVASSTQS--CQGATLYITLSPCKDCSKLIHQSGIKRVVYHKGYKDD-- 122

Query: 108 GGIENGTQFYT 118
               +G +F  
Sbjct: 123 ----SGLKFLE 129


>gi|61742821|ref|NP_001012750.1| deoxycytidylate deaminase isoform a [Homo sapiens]
 gi|66840174|gb|AAH88357.2| DCMP deaminase [Homo sapiens]
 gi|119625102|gb|EAX04697.1| dCMP deaminase, isoform CRA_a [Homo sapiens]
 gi|119625103|gb|EAX04698.1| dCMP deaminase, isoform CRA_a [Homo sapiens]
          Length = 189

 Score = 66.5 bits (162), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 32/116 (27%), Positives = 42/116 (36%), Gaps = 25/116 (21%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGN-RNRELKD------VTA---- 52
             FM+ A   AQ +   N   VGA  V   NKI+    N       D       TA    
Sbjct: 28  EYFMAVAFLSAQRSKDPNSQ-VGACIVNSENKIVGIGYNGMPNGCSDDVLPWRRTAENKL 86

Query: 53  --------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
                   HAE+ AI       +   +    +YV L PC  CA  I  A I+ + +
Sbjct: 87  DTKYPYVCHAELNAIMN----KNSTDVKGCSMYVALFPCNECAKLIIQAGIKEVIF 138


>gi|55623552|ref|XP_517546.1| PREDICTED: deoxycytidylate deaminase isoform 4 [Pan troglodytes]
          Length = 189

 Score = 66.5 bits (162), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 32/116 (27%), Positives = 42/116 (36%), Gaps = 25/116 (21%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGN-RNRELKD------VTA---- 52
             FM+ A   AQ +   N   VGA  V   NKI+    N       D       TA    
Sbjct: 28  EYFMAVAFLSAQRSKDPNSQ-VGACIVNSENKIVGIGYNGMPNGCSDDVLPWRRTAENKL 86

Query: 53  --------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
                   HAE+ AI       +   +    +YV L PC  CA  I  A I+ + +
Sbjct: 87  DTKYPYVCHAELNAIMN----KNSTDVKGCSMYVALFPCNECAKLIIQAGIKEVIF 138


>gi|126462807|ref|YP_001043921.1| riboflavin biosynthesis protein RibD [Rhodobacter sphaeroides ATCC
           17029]
 gi|126104471|gb|ABN77149.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Rhodobacter sphaeroides ATCC 17029]
          Length = 356

 Score = 66.5 bits (162), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 32/148 (21%), Positives = 45/148 (30%), Gaps = 21/148 (14%)

Query: 8   MSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M+ AL        R      VG V V   +++ R   R         HAE +        
Sbjct: 1   MAHALRLGARGLGRTWPNPAVGCVIVKAGRVVGRGWTRPGGR----PHAEPV-----ALA 51

Query: 66  LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
            +         YVTLEPC        CA A+  A + R+     +P       G      
Sbjct: 52  QAGAAALGATAYVTLEPCSHHGRTPPCAEALIAAGLARVVTATGDPDPRVSGRGHAMLRE 111

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKE 147
           A       +   + E  +R     F K 
Sbjct: 112 AG----IAVTERVLEAEARAAHAGFLKR 135


>gi|289168253|ref|YP_003446522.1| dCMP deaminase [Streptococcus mitis B6]
 gi|307705252|ref|ZP_07642119.1| comE operon protein 2 [Streptococcus mitis SK597]
 gi|307706964|ref|ZP_07643763.1| comE operon protein 2 [Streptococcus mitis SK321]
 gi|288907820|emb|CBJ22660.1| dCMP deaminase [Streptococcus mitis B6]
 gi|307617678|gb|EFN96846.1| comE operon protein 2 [Streptococcus mitis SK321]
 gi|307621201|gb|EFO00271.1| comE operon protein 2 [Streptococcus mitis SK597]
          Length = 155

 Score = 66.5 bits (162), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 31/117 (26%), Positives = 41/117 (35%), Gaps = 29/117 (24%)

Query: 4   GNVFMSCALEEA-----QNAALRNEIPVGAVAVLNNKIISRAGN--------------RN 44
              F + AL  A     + A       VGA+ V +NK+IS   N                
Sbjct: 9   DEYFAAQALLIANRSTCKRAK------VGAILVKDNKVISTGYNGSVSGTEHCIDHECLV 62

Query: 45  RELKDV-TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
            E   V T HAE+ AI  G      +       YVT  PC  C   +     +R+ Y
Sbjct: 63  IEGHCVRTLHAEVNAILQGAERGVPK---GFTAYVTHFPCLNCTKQLLQVGCKRVVY 116


>gi|153009855|ref|YP_001371070.1| riboflavin biosynthesis protein RibD [Ochrobactrum anthropi ATCC
           49188]
 gi|151561743|gb|ABS15241.1| riboflavin biosynthesis protein RibD [Ochrobactrum anthropi ATCC
           49188]
          Length = 373

 Score = 66.5 bits (162), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 32/145 (22%), Positives = 48/145 (33%), Gaps = 21/145 (14%)

Query: 3   KGNVFMSCALEEAQ--NAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
               FM   +  A+           VG + V +  I+ R             HAE  A+ 
Sbjct: 14  DDVRFMEATIRYARRHKGLTGTNPSVGTIIVKDGVIVGRG----VTAIGGRPHAEPQALA 69

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
               +           YVTLEPC        CA A+  A + R+   A++P       G 
Sbjct: 70  DAGEVA-----RGATAYVTLEPCAHHGRTPPCAEALVRAGVARVVVAATDPDERVSGRGF 124

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQ 139
                A      E+ PGI  +++  
Sbjct: 125 AILREAG----IEVVPGILAEQAAD 145


>gi|257065945|ref|YP_003152201.1| CMP/dCMP deaminase zinc-binding [Anaerococcus prevotii DSM 20548]
 gi|256797825|gb|ACV28480.1| CMP/dCMP deaminase zinc-binding [Anaerococcus prevotii DSM 20548]
          Length = 148

 Score = 66.5 bits (162), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 31/121 (25%), Positives = 44/121 (36%), Gaps = 24/121 (19%)

Query: 1   MKKG-----NVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNR--------- 45
           M K        FM  A   A+         VG V V   N+I+S   N +          
Sbjct: 1   MAKDRLSWEEYFMKLAKTVARRGTCDRAY-VGCVLVNEENRIVSTGYNGSIKGNPHCDEV 59

Query: 46  --ELKD----VTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLY 99
              ++D     T HAE+ AI    +            YVT  PC  C  ++  A I+++Y
Sbjct: 60  GHTMRDGHCIATIHAEMNAILYCAKEGIAT--KNTICYVTHFPCLNCTKSLIQAGIKKIY 117

Query: 100 Y 100
           Y
Sbjct: 118 Y 118


>gi|289705541|ref|ZP_06501933.1| riboflavin biosynthesis protein RibD [Micrococcus luteus SK58]
 gi|289557770|gb|EFD51069.1| riboflavin biosynthesis protein RibD [Micrococcus luteus SK58]
          Length = 377

 Score = 66.5 bits (162), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 32/146 (21%), Positives = 52/146 (35%), Gaps = 22/146 (15%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  A+  A          VGAV      ++++   +R R     TAHAE+ A+       
Sbjct: 12  MDLAVRAALRGVRGANPLVGAVLTDEAGRVLAVGHHRGR----GTAHAEVDALTRWRAAR 67

Query: 67  SQEILP------EVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGT 114
           + +          + L+VTLEPC        C+ A+  A I  L Y  ++P G       
Sbjct: 68  AADPALAALDPAGLTLHVTLEPCDHTGSTGPCSQAVLDAGIGALRYAVADPTGHDGGGAA 127

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQI 140
           +        H   +     E  +  +
Sbjct: 128 RLAA-----HGVRVTGPTGEAAALAL 148


>gi|227500311|ref|ZP_03930378.1| competence protein ComEB family protein [Anaerococcus tetradius
           ATCC 35098]
 gi|227217597|gb|EEI82909.1| competence protein ComEB family protein [Anaerococcus tetradius
           ATCC 35098]
          Length = 148

 Score = 66.5 bits (162), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 31/121 (25%), Positives = 44/121 (36%), Gaps = 24/121 (19%)

Query: 1   MKKG-----NVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNR--------- 45
           M K        FM  A   A+         VG V V   N+I+S   N +          
Sbjct: 1   MAKDRLSWQEYFMKLAKTVARRGTCDRAY-VGCVLVNEENRIVSTGYNGSIKGNPHCDEV 59

Query: 46  --ELKD----VTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLY 99
              ++D     T HAE+ AI    +            YVT  PC  C  ++  A I+++Y
Sbjct: 60  GHTMRDGHCIATIHAEMNAILYCAKEGIAT--KNTICYVTHFPCLNCTKSLIQAGIKKIY 117

Query: 100 Y 100
           Y
Sbjct: 118 Y 118


>gi|110004586|emb|CAK98923.1| deoxycytidylate deaminase protein [Spiroplasma citri]
          Length = 166

 Score = 66.5 bits (162), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 33/131 (25%), Positives = 46/131 (35%), Gaps = 33/131 (25%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLN-NKIISRAGN-RNRELKD------ 49
           +   + F+S A   A  +      P   VG+  V    +II+   N   R L D      
Sbjct: 13  LSWDDFFLSVAHVCAMRSKD----PHTQVGSCVVNQIGQIIATGYNGLPRGLNDDVFPWS 68

Query: 50  ----------V-TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98
                        AHAE+ AI        +  L    +Y TL PC  C   I  A I+ +
Sbjct: 69  REGKYLETKYPYVAHAELNAILSA-----RTNLENCRIYTTLFPCAECTKIIIQAGIKEV 123

Query: 99  YYGASNPKGGG 109
            Y   + K  G
Sbjct: 124 IY--DDDKYEG 132


>gi|52141178|ref|YP_085651.1| ComE operon protein 2 [Bacillus cereus E33L]
 gi|51974647|gb|AAU16197.1| comE operon protein 2 [Bacillus cereus E33L]
          Length = 185

 Score = 66.5 bits (162), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 25/91 (27%), Positives = 38/91 (41%), Gaps = 17/91 (18%)

Query: 26  VGAVAVLNNKIISRAGNRNRELK-----DV----------TAHAEILAIRMGCRILSQEI 70
           VGA  V + +II+   N + +       D           T HAE+ A+    +   +  
Sbjct: 28  VGATIVRDKRIIAGGYNGSIKGGVHCIDDGCYVIDNHCVRTIHAEMNALLQCAKFGVKT- 86

Query: 71  LPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
             E ++YVT  PC  C  AI  + I  +YY 
Sbjct: 87  -EEAEIYVTHFPCLQCCKAIIQSGITAVYYA 116


>gi|169775663|ref|XP_001822298.1| hypothetical protein AOR_1_92134 [Aspergillus oryzae RIB40]
 gi|83771033|dbj|BAE61165.1| unnamed protein product [Aspergillus oryzae]
          Length = 164

 Score = 66.1 bits (161), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 22/59 (37%), Positives = 26/59 (44%)

Query: 52  AHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI 110
            HAE    R      +++ L E     T EPC MCA  I  A I RL Y AS     G+
Sbjct: 55  RHAEAELARNAADNYARDYLAETTFISTWEPCAMCAGTIYWANIGRLVYLASEKALQGV 113


>gi|321312043|ref|YP_004204330.1| DNA transport protein [Bacillus subtilis BSn5]
 gi|320018317|gb|ADV93303.1| putative enzyme associated to DNA transport (competence) [Bacillus
           subtilis BSn5]
          Length = 189

 Score = 66.1 bits (161), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 29/125 (23%), Positives = 46/125 (36%), Gaps = 25/125 (20%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRE----------- 46
           +     FM+ +   A  +      P   VGA  V + ++I+   N +             
Sbjct: 4   ISWNQYFMAQSHLLALRSTC----PRLSVGATIVRDKRMIAGGYNGSIAGGVHCADEGCL 59

Query: 47  ----LKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGA 102
                   T HAE+ AI    +          ++YVT  PC  C  +I  A I+ +YY A
Sbjct: 60  MIDDHCARTIHAEMNAILQCSKFGVPTD--GAEIYVTHYPCIQCCKSIIQAGIKTVYY-A 116

Query: 103 SNPKG 107
            + K 
Sbjct: 117 EDYKT 121


>gi|224006712|ref|XP_002292316.1| predicted protein [Thalassiosira pseudonana CCMP1335]
 gi|220971958|gb|EED90291.1| predicted protein [Thalassiosira pseudonana CCMP1335]
          Length = 777

 Score = 66.1 bits (161), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 37/175 (21%), Positives = 59/175 (33%), Gaps = 43/175 (24%)

Query: 2   KKGNVFMSCALEEAQN-AALRNEI-----PV-GAVAV-LNNKIISRAGNRNRELKDVTAH 53
           K     M  A+   Q+    R        PV GAV V  + +I+ +  +          H
Sbjct: 179 KHDKAMMRQAIMMVQSSGGERGSHGPFPRPVAGAVLVAKDGRILGKGRSTYA------GH 232

Query: 54  A------E--ILA--IRMGCRILSQE-----ILPEVDLYVTLEPC--------TMCAAAI 90
           A      E  I A  +R  C     +      + E  LYVTLEP               +
Sbjct: 233 AVEFAFKEAGINATPLREWCVAWPSDSKFRKDISESTLYVTLEPSNEGQGEEKPPITQLV 292

Query: 91  SLARIRRLYYGASNPKG-GGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
            +A I RL  G  +P      E   + +          +  GI +   + +I+++
Sbjct: 293 EMAGIPRLVIGCQDPVPENAAEGAGRLHAA-----GVSVTMGILQGECQDLIKEY 342


>gi|156372900|ref|XP_001629273.1| predicted protein [Nematostella vectensis]
 gi|156216269|gb|EDO37210.1| predicted protein [Nematostella vectensis]
          Length = 208

 Score = 66.1 bits (161), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 28/123 (22%), Positives = 41/123 (33%), Gaps = 31/123 (25%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAV-LNNKIISRAGN-RNRELKD------ 49
           +   + FMS A   AQ +      P   VGA  V    KI+    N       D      
Sbjct: 47  ISWDDYFMSVAFLSAQRSKD----PSSQVGACIVNKERKIVGIGYNGMPNGCSDDELPWN 102

Query: 50  -----------V-TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRR 97
                          HAE+ AI       +   +    +YV L PC  C+  I  A ++ 
Sbjct: 103 RHADDELDTKYPYVCHAEMNAILN----KNSADVKGCTVYVALFPCNECSKIIIQAGLKE 158

Query: 98  LYY 100
           + +
Sbjct: 159 VVF 161


>gi|228929371|ref|ZP_04092394.1| ComE operon protein 2 [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|228830277|gb|EEM75891.1| ComE operon protein 2 [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
          Length = 188

 Score = 66.1 bits (161), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 25/91 (27%), Positives = 38/91 (41%), Gaps = 17/91 (18%)

Query: 26  VGAVAVLNNKIISRAGNRNRELK-----DV----------TAHAEILAIRMGCRILSQEI 70
           VGA  V + +II+   N + +       D           T HAE+ A+    +   +  
Sbjct: 31  VGATIVRDKRIIAGGYNGSIKGGVHCIDDGCYVIDNHCVRTIHAEMNALLQCAKFGVKT- 89

Query: 71  LPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
             E ++YVT  PC  C  AI  + I  +YY 
Sbjct: 90  -EEAEIYVTHFPCLQCCKAIIQSGITAVYYA 119


>gi|313212148|emb|CBY16157.1| unnamed protein product [Oikopleura dioica]
          Length = 195

 Score = 66.1 bits (161), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 32/132 (24%), Positives = 47/132 (35%), Gaps = 32/132 (24%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAV-LNNKIISRAGNRN------------ 44
           +     FMS AL  +Q +      P   VGA  +    +I+    N              
Sbjct: 9   LSWDEYFMSIALLSSQRSKD----PATQVGACIINKKQRIVGIGYNGLPHGCSDKELPWG 64

Query: 45  -----RELKDV-TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98
                 E K     HAE+ AI       +Q  +    ++ TL PC  CA  I  + I ++
Sbjct: 65  KTGDWMETKYPYVCHAEMNAILN----KNQADIDGGTIFTTLYPCNECAKLIIQSGISKV 120

Query: 99  YYGASNPKGGGI 110
            Y   N K G +
Sbjct: 121 VYA--NKKPGSV 130


>gi|300858536|ref|YP_003783519.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Corynebacterium pseudotuberculosis FRC41]
 gi|300685990|gb|ADK28912.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Corynebacterium pseudotuberculosis FRC41]
 gi|302206248|gb|ADL10590.1| Riboflavin biosynthesis protein ribD [Corynebacterium
           pseudotuberculosis C231]
 gi|302330806|gb|ADL21000.1| Riboflavin biosynthesis protein ribD [Corynebacterium
           pseudotuberculosis 1002]
 gi|308276490|gb|ADO26389.1| Riboflavin biosynthesis protein ribD [Corynebacterium
           pseudotuberculosis I19]
          Length = 373

 Score = 66.1 bits (161), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 27/111 (24%), Positives = 38/111 (34%), Gaps = 27/111 (24%)

Query: 17  NAALRNE---------IPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
            A  + E          PVGA  V     I+     +         HAE++A++      
Sbjct: 54  EAVAQGELAQGSTSPNPPVGAAIVSAQGDIVGVGYTQPVGG----PHAEVMALQSAGGAA 109

Query: 67  SQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP--KGGG 109
                    + VTLEPC        C  A+  A I  + Y   +P  K GG
Sbjct: 110 -----RGATIVVTLEPCQHQGRTGPCTQALLDAGIAEVVYCLKDPGRKEGG 155


>gi|229013547|ref|ZP_04170680.1| ComE operon protein 2 [Bacillus mycoides DSM 2048]
 gi|229062025|ref|ZP_04199350.1| ComE operon protein 2 [Bacillus cereus AH603]
 gi|228717177|gb|EEL68852.1| ComE operon protein 2 [Bacillus cereus AH603]
 gi|228747707|gb|EEL97577.1| ComE operon protein 2 [Bacillus mycoides DSM 2048]
          Length = 188

 Score = 66.1 bits (161), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 24/91 (26%), Positives = 39/91 (42%), Gaps = 17/91 (18%)

Query: 26  VGAVAVLNNKIISRAGNRNRELK-----DV----------TAHAEILAIRMGCRILSQEI 70
           VGA  V + +II+   N + +       D           T HAE+ A+    +  ++  
Sbjct: 31  VGATIVRDKRIIAGGYNGSIKGGVHCIDDGCYVIDNHCVRTIHAEMNALLQCAKFGAKT- 89

Query: 71  LPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
             E ++YVT  PC  C  AI  + +  +YY 
Sbjct: 90  -EEAEIYVTHFPCLQCCKAIIQSGVTAVYYA 119


>gi|167753214|ref|ZP_02425341.1| hypothetical protein ALIPUT_01485 [Alistipes putredinis DSM 17216]
 gi|167659145|gb|EDS03275.1| hypothetical protein ALIPUT_01485 [Alistipes putredinis DSM 17216]
          Length = 144

 Score = 66.1 bits (161), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 26/87 (29%), Positives = 34/87 (39%), Gaps = 14/87 (16%)

Query: 26  VGAVAVLNNKIISRAGN------------RNRELKDVTAHAEILAIRMGCRILSQEILPE 73
           VGA+ V +  IIS   N               + K    HAE  AI    +  +      
Sbjct: 33  VGALIVKDKMIISDGYNGTPAGFENICEDETGKTKSYVLHAEANAITKVAKSANNCD--G 90

Query: 74  VDLYVTLEPCTMCAAAISLARIRRLYY 100
             LY+T  PC  C+  I  A IRR+ Y
Sbjct: 91  STLYITAAPCIECSKLIIQAGIRRVVY 117


>gi|330903778|gb|EGH34350.1| cytosine deaminase [Pseudomonas syringae pv. japonica str.
          M301072PT]
          Length = 40

 Score = 66.1 bits (161), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 17/39 (43%), Positives = 21/39 (53%)

Query: 5  NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNR 43
          + FM  A +EAQ       IP+G+V V   KII R  NR
Sbjct: 2  DAFMQAAFDEAQLGLKEGGIPIGSVIVHGGKIIGRGHNR 40


>gi|48477494|ref|YP_023200.1| deaminase [Picrophilus torridus DSM 9790]
 gi|48430142|gb|AAT43007.1| deaminase [Picrophilus torridus DSM 9790]
          Length = 172

 Score = 66.1 bits (161), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 28/131 (21%), Positives = 44/131 (33%), Gaps = 36/131 (27%)

Query: 4   GNVFMSCALEEAQNA---ALRNEIPVGAVAVLNNKIISRAGN------------------ 42
              FM  A   A  +     +    VGAV V +N++++   N                  
Sbjct: 11  DEYFMRMAYLAASRSNCTRRK----VGAVIVKDNQVLATGYNGPPTHAVNCDLVGCIRDE 66

Query: 43  ------RNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIR 96
                    EL     HAE  AI      ++   +    +YVT  PC +C+  +  A I 
Sbjct: 67  LGIQSGERHELCRGL-HAEQNAIIQAA--VNGVSIKGAKIYVTTHPCVVCSKMLMNAYID 123

Query: 97  RLYY--GASNP 105
            + Y  G  + 
Sbjct: 124 EIIYSEGYPDD 134


>gi|320165206|gb|EFW42105.1| deoxycytidylate deaminase [Capsaspora owczarzaki ATCC 30864]
          Length = 192

 Score = 66.1 bits (161), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 31/119 (26%), Positives = 43/119 (36%), Gaps = 31/119 (26%)

Query: 5   NVFMSCALEEAQNAALRNEIP---VGAVAV-LNNKIISRAGN-RNRELKD------VTA- 52
           + FM+ A   AQ +      P   VGA  V   NKI+    N       D       TA 
Sbjct: 39  DYFMAVAFLSAQRSKD----PSSQVGACIVNQENKIVGIGYNGMPNGCNDDLLPWARTAE 94

Query: 53  -----------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
                      HAE+ A+       +   +    +YV L PC  CA  I  + I+ + Y
Sbjct: 95  SPLDTKYMYVCHAELNAVLN----KNASDVKGCTIYVALFPCNECAKIIIQSGIKEVIY 149


>gi|229175001|ref|ZP_04302520.1| ComE operon protein 2 [Bacillus cereus MM3]
 gi|228608462|gb|EEK65765.1| ComE operon protein 2 [Bacillus cereus MM3]
          Length = 188

 Score = 66.1 bits (161), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 25/91 (27%), Positives = 38/91 (41%), Gaps = 17/91 (18%)

Query: 26  VGAVAVLNNKIISRAGNRNRELK-----DV----------TAHAEILAIRMGCRILSQEI 70
           VGA  V + +II+   N + +       D           T HAE+ A+    +   +  
Sbjct: 31  VGATIVRDKRIIAGGYNGSIKGGVHCIDDGCYVIDNHCVRTIHAEMNALLQCAKFGVKT- 89

Query: 71  LPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
             E ++YVT  PC  C  AI  + I  +YY 
Sbjct: 90  -EEAEIYVTHFPCLQCCKAIIQSGITAVYYA 119


>gi|209731626|gb|ACI66682.1| Deoxycytidylate deaminase [Salmo salar]
 gi|209735240|gb|ACI68489.1| Deoxycytidylate deaminase [Salmo salar]
 gi|303666664|gb|ADM16237.1| Deoxycytidylate deaminase [Salmo salar]
          Length = 195

 Score = 66.1 bits (161), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 31/119 (26%), Positives = 41/119 (34%), Gaps = 31/119 (26%)

Query: 5   NVFMSCALEEAQNAALRNEIP---VGAVAV-LNNKIISRAGN------------------ 42
             FM+ A   AQ +      P   VGA  V   NKI+    N                  
Sbjct: 34  EYFMAVAFLSAQRSKD----PSSQVGACIVNQENKIVGIGYNGMPNGCDDDLLPWARSAD 89

Query: 43  RNRELKDV-TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
              + K     HAE+ AI       +   +    +YV L PC  CA  I  A I+ + Y
Sbjct: 90  DRLDTKYPYVCHAELNAIMN----KNSADVKGCSMYVALFPCNECAKLIIQAGIKDVIY 144


>gi|118479492|ref|YP_896643.1| comE operon protein 2 [Bacillus thuringiensis str. Al Hakam]
 gi|228916958|ref|ZP_04080519.1| ComE operon protein 2 [Bacillus thuringiensis serovar pulsiensis
           BGSC 4CC1]
 gi|228935647|ref|ZP_04098461.1| ComE operon protein 2 [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228948040|ref|ZP_04110325.1| ComE operon protein 2 [Bacillus thuringiensis serovar monterrey
           BGSC 4AJ1]
 gi|228987579|ref|ZP_04147696.1| ComE operon protein 2 [Bacillus thuringiensis serovar tochigiensis
           BGSC 4Y1]
 gi|229093396|ref|ZP_04224501.1| ComE operon protein 2 [Bacillus cereus Rock3-42]
 gi|229141064|ref|ZP_04269606.1| ComE operon protein 2 [Bacillus cereus BDRD-ST26]
 gi|229157941|ref|ZP_04286013.1| ComE operon protein 2 [Bacillus cereus ATCC 4342]
 gi|229186566|ref|ZP_04313727.1| ComE operon protein 2 [Bacillus cereus BGSC 6E1]
 gi|229198454|ref|ZP_04325158.1| ComE operon protein 2 [Bacillus cereus m1293]
 gi|118418717|gb|ABK87136.1| comE operon protein 2 [Bacillus thuringiensis str. Al Hakam]
 gi|228584957|gb|EEK43071.1| ComE operon protein 2 [Bacillus cereus m1293]
 gi|228596825|gb|EEK54484.1| ComE operon protein 2 [Bacillus cereus BGSC 6E1]
 gi|228625501|gb|EEK82256.1| ComE operon protein 2 [Bacillus cereus ATCC 4342]
 gi|228642342|gb|EEK98631.1| ComE operon protein 2 [Bacillus cereus BDRD-ST26]
 gi|228689990|gb|EEL43793.1| ComE operon protein 2 [Bacillus cereus Rock3-42]
 gi|228772153|gb|EEM20602.1| ComE operon protein 2 [Bacillus thuringiensis serovar tochigiensis
           BGSC 4Y1]
 gi|228811626|gb|EEM57962.1| ComE operon protein 2 [Bacillus thuringiensis serovar monterrey
           BGSC 4AJ1]
 gi|228824007|gb|EEM69825.1| ComE operon protein 2 [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228842679|gb|EEM87766.1| ComE operon protein 2 [Bacillus thuringiensis serovar pulsiensis
           BGSC 4CC1]
          Length = 188

 Score = 66.1 bits (161), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 25/91 (27%), Positives = 38/91 (41%), Gaps = 17/91 (18%)

Query: 26  VGAVAVLNNKIISRAGNRNRELK-----DV----------TAHAEILAIRMGCRILSQEI 70
           VGA  V + +II+   N + +       D           T HAE+ A+    +   +  
Sbjct: 31  VGATIVRDKRIIAGGYNGSIKGGVHCIDDGCYVIDNHCVRTIHAEMNALLQCAKFGVKT- 89

Query: 71  LPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
             E ++YVT  PC  C  AI  + I  +YY 
Sbjct: 90  -EEAEIYVTHFPCLQCCKAIIQSGITAVYYA 119


>gi|229031977|ref|ZP_04187962.1| ComE operon protein 2 [Bacillus cereus AH1271]
 gi|228729332|gb|EEL80324.1| ComE operon protein 2 [Bacillus cereus AH1271]
          Length = 188

 Score = 66.1 bits (161), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 25/91 (27%), Positives = 38/91 (41%), Gaps = 17/91 (18%)

Query: 26  VGAVAVLNNKIISRAGNRNRELK-----DV----------TAHAEILAIRMGCRILSQEI 70
           VGA  V + +II+   N + +       D           T HAE+ A+    +   +  
Sbjct: 31  VGATIVRDKRIIAGGYNGSIKGGVHCIDDGCYVIDNHCVRTIHAEMNALLQCAKFGVKT- 89

Query: 71  LPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
             E ++YVT  PC  C  AI  + I  +YY 
Sbjct: 90  -EEAEIYVTHFPCLQCCKAIIQSGITAVYYA 119


>gi|212633820|ref|YP_002310345.1| cytidine/deoxycytidylate deaminase [Shewanella piezotolerans WP3]
 gi|212555304|gb|ACJ27758.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [Shewanella
           piezotolerans WP3]
          Length = 146

 Score = 66.1 bits (161), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 25/86 (29%), Positives = 32/86 (37%), Gaps = 18/86 (20%)

Query: 26  VGAVAVLNNKIISRAGN-------------RNRELKDVTAHAEILAIRMGCRILSQEILP 72
           VGAV   NN+I+S   N                     T HAE  AI    R      L 
Sbjct: 27  VGAVITENNRIVSLGFNGYPHGVSDSAETDNREMKLLKTLHAEENAILYAKR-----DLS 81

Query: 73  EVDLYVTLEPCTMCAAAISLARIRRL 98
             +++VT  PC  CAA I    +  +
Sbjct: 82  GCEIWVTHFPCPNCAAKIIQTGLSTV 107


>gi|297182203|gb|ADI18374.1| pyrimidine deaminase [uncultured actinobacterium HF4000_04C13]
          Length = 338

 Score = 66.1 bits (161), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 29/130 (22%), Positives = 45/130 (34%), Gaps = 19/130 (14%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC-- 83
           VGAV V++ +++     +        AHAE +         +        LY TLEPC  
Sbjct: 33  VGAVVVVDGRMVGSGATQPPGG----AHAERV-----ALAEAGPAAAGATLYTTLEPCDH 83

Query: 84  ----TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139
                 C  AI  A + R+  G  +P       G      A      ++  G+ E     
Sbjct: 84  EGRTAPCTDAIIGAGVARVVVGIGDPDPEVSGRGIGRLREAGL----DVDVGVLEDEVSD 139

Query: 140 IIQDFFKERR 149
            +  +   RR
Sbjct: 140 TLAPYLHHRR 149


>gi|163942082|ref|YP_001646966.1| ComE operon protein 2 [Bacillus weihenstephanensis KBAB4]
 gi|163864279|gb|ABY45338.1| ComE operon protein 2 [Bacillus weihenstephanensis KBAB4]
          Length = 185

 Score = 66.1 bits (161), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 24/91 (26%), Positives = 39/91 (42%), Gaps = 17/91 (18%)

Query: 26  VGAVAVLNNKIISRAGNRNRELK-----DV----------TAHAEILAIRMGCRILSQEI 70
           VGA  V + +II+   N + +       D           T HAE+ A+    +  ++  
Sbjct: 28  VGATIVRDKRIIAGGYNGSIKGGVHCIDDGCYVIDNHCVRTIHAEMNALLQCAKFGAKT- 86

Query: 71  LPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
             E ++YVT  PC  C  AI  + +  +YY 
Sbjct: 87  -EEAEIYVTHFPCLQCCKAIIQSGVTAVYYA 116


>gi|327489897|gb|EGF21686.1| cytidine and deoxycytidylate deaminase [Streptococcus sanguinis
           SK1058]
          Length = 155

 Score = 66.1 bits (161), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 31/117 (26%), Positives = 41/117 (35%), Gaps = 29/117 (24%)

Query: 4   GNVFMSCALEEA-----QNAALRNEIPVGAVAVLNNKIISRAGNRNRELK---------- 48
              F + AL  A     + A       VGAV V +NK+IS   N +              
Sbjct: 9   DQYFAAQALLIANRSTCKRAK------VGAVLVKDNKVISTGYNGSVSGTEHCIDHECLV 62

Query: 49  -DV----TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
            D     T HAE+ AI  G      +       YVT  PC  C   +     +R+ Y
Sbjct: 63  IDGHCVRTLHAEVNAILQGAERGVPK---GFTAYVTHFPCLNCTKQLLQVGCKRVVY 116


>gi|317128288|ref|YP_004094570.1| ComE operon protein 2 [Bacillus cellulosilyticus DSM 2522]
 gi|315473236|gb|ADU29839.1| ComE operon protein 2 [Bacillus cellulosilyticus DSM 2522]
          Length = 188

 Score = 66.1 bits (161), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 27/116 (23%), Positives = 45/116 (38%), Gaps = 18/116 (15%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNR--------------NRE 46
           +     FM+ +   A  +     + VGA  V + +II+   N                 +
Sbjct: 4   ISWHQYFMAQSHLLALRSTCSR-LMVGATIVRDKRIIAGGYNGAISGGVHCIDEGCYVID 62

Query: 47  LKDV-TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
              V T HAE+ A+    +          ++YVT  PC  C  A+  A I+++YY 
Sbjct: 63  DHCVRTIHAEVNALLQCAKFGVAT--EGSEIYVTHFPCLNCCKALIQAGIKKVYYA 116


>gi|218905463|ref|YP_002453297.1| ComE operon protein 2 [Bacillus cereus AH820]
 gi|218539989|gb|ACK92387.1| ComE operon protein 2 [Bacillus cereus AH820]
          Length = 185

 Score = 66.1 bits (161), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 25/91 (27%), Positives = 38/91 (41%), Gaps = 17/91 (18%)

Query: 26  VGAVAVLNNKIISRAGNRNRELK-----DV----------TAHAEILAIRMGCRILSQEI 70
           VGA  V + +II+   N + +       D           T HAE+ A+    +   +  
Sbjct: 28  VGATIVRDKRIIAGGYNGSIKGGVHCIDDGCYVIDNHCVRTIHAEMNALLQCAKFGVKT- 86

Query: 71  LPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
             E ++YVT  PC  C  AI  + I  +YY 
Sbjct: 87  -EEAEIYVTHFPCLQCCKAIIQSGITAVYYA 116


>gi|16079612|ref|NP_390436.1| hypothetical protein BSU25580 [Bacillus subtilis subsp. subtilis
           str. 168]
 gi|221310483|ref|ZP_03592330.1| required for DNA binding and uptake (competence) [Bacillus subtilis
           subsp. subtilis str. 168]
 gi|221314807|ref|ZP_03596612.1| required for DNA binding and uptake (competence) [Bacillus subtilis
           subsp. subtilis str. NCIB 3610]
 gi|221319729|ref|ZP_03601023.1| required for DNA binding and uptake (competence) [Bacillus subtilis
           subsp. subtilis str. JH642]
 gi|221324007|ref|ZP_03605301.1| required for DNA binding and uptake (competence) [Bacillus subtilis
           subsp. subtilis str. SMY]
 gi|418361|sp|P32393|COMEB_BACSU RecName: Full=ComE operon protein 2
 gi|289261|gb|AAC36906.1| comE ORF2 [Bacillus subtilis]
 gi|1303797|dbj|BAA12453.1| ComEB [Bacillus subtilis]
 gi|2635004|emb|CAB14500.1| putative enzyme associated to DNA transport (competence) [Bacillus
           subtilis subsp. subtilis str. 168]
 gi|291485008|dbj|BAI86083.1| operon protein ComEB [Bacillus subtilis subsp. natto BEST195]
          Length = 189

 Score = 66.1 bits (161), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 29/125 (23%), Positives = 46/125 (36%), Gaps = 25/125 (20%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRE----------- 46
           +     FM+ +   A  +      P   VGA  V + ++I+   N +             
Sbjct: 4   ISWNQYFMAQSHLLALRSTC----PRLSVGATIVRDKRMIAGGYNGSIAGGVHCADEGCL 59

Query: 47  ----LKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGA 102
                   T HAE+ AI    +          ++YVT  PC  C  +I  A I+ +YY A
Sbjct: 60  MIDDHCARTIHAEMNAILQCSKFGVPTD--GAEIYVTHYPCIQCCKSIIQAGIKTVYY-A 116

Query: 103 SNPKG 107
            + K 
Sbjct: 117 EDYKT 121


>gi|330837260|ref|YP_004411901.1| dCMP deaminase [Spirochaeta coccoides DSM 17374]
 gi|329749163|gb|AEC02519.1| dCMP deaminase [Spirochaeta coccoides DSM 17374]
          Length = 161

 Score = 66.1 bits (161), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 35/122 (28%), Positives = 41/122 (33%), Gaps = 31/122 (25%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNK-IISRAGN-------------R 43
           +     FM  AL  A  +      P   VGA  V   K I+    N              
Sbjct: 8   ISWDEYFMGVALLSAMRSKD----PSTQVGACIVSPEKRIVGVGYNGFPSGCNDDDLPWE 63

Query: 44  NR----ELKDV-TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98
                 E K     HAE+ AI     + S   L    LYV L PC  CA AI  A I  +
Sbjct: 64  REGAFLETKYPFVCHAELNAI-----LNSSGNLKGSSLYVALFPCNECAKAIIQAGIVEI 118

Query: 99  YY 100
            Y
Sbjct: 119 VY 120


>gi|229123865|ref|ZP_04253058.1| ComE operon protein 2 [Bacillus cereus 95/8201]
 gi|228659579|gb|EEL15226.1| ComE operon protein 2 [Bacillus cereus 95/8201]
          Length = 188

 Score = 66.1 bits (161), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 25/91 (27%), Positives = 38/91 (41%), Gaps = 17/91 (18%)

Query: 26  VGAVAVLNNKIISRAGNRNRELK-----DV----------TAHAEILAIRMGCRILSQEI 70
           VGA  V + +II+   N + +       D           T HAE+ A+    +   +  
Sbjct: 31  VGATIVRDKRIIAGGYNGSIKGGVHCIDDGCYVIDNHCVRTIHAEMNALLQCAKFGVKT- 89

Query: 71  LPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
             E ++YVT  PC  C  AI  + I  +YY 
Sbjct: 90  -EEAEIYVTHFPCLQCCKAIIQSGITAVYYA 119


>gi|310831344|ref|YP_003969987.1| putative deoxycytidylate deaminase [Cafeteria roenbergensis virus
           BV-PW1]
 gi|309386528|gb|ADO67388.1| putative deoxycytidylate deaminase [Cafeteria roenbergensis virus
           BV-PW1]
          Length = 144

 Score = 66.1 bits (161), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 26/90 (28%), Positives = 35/90 (38%), Gaps = 13/90 (14%)

Query: 26  VGAVAVLNNKIISRAGN-----------RNRELKDVTAHAEILAIRMGCRILSQEILPEV 74
           VG V V N +II+   N                +  T HAE  AI    ++         
Sbjct: 38  VGCVIVKNKRIIATGYNGFPPGVEHISILKEGKEINTIHAEQNAISQCAKMGIS--CENS 95

Query: 75  DLYVTLEPCTMCAAAISLARIRRLYYGASN 104
            LYVT  PC  C+  I  + I  +YY  +N
Sbjct: 96  VLYVTHYPCINCSKIIVASGISTIYYLHNN 125


>gi|150388180|ref|YP_001318229.1| CMP/dCMP deaminase, zinc-binding [Alkaliphilus metalliredigens
           QYMF]
 gi|149948042|gb|ABR46570.1| CMP/dCMP deaminase, zinc-binding [Alkaliphilus metalliredigens
           QYMF]
          Length = 146

 Score = 66.1 bits (161), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 29/130 (22%), Positives = 43/130 (33%), Gaps = 46/130 (35%)

Query: 4   GNVFMSCALEEAQNAALRNEIP----------VGAVAVLNNKIISRAGN----------- 42
              FM  A           E+           VGAV V + +++S   N           
Sbjct: 6   DQYFMEMA-----------EVVKTRSTCMRRQVGAVVVKDKRVLSSGYNGAPSGIEHCEK 54

Query: 43  ---RNRELKDVTA---------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAI 90
                 +L   +          HAE  AI           +    LYVTL+PC +CA  +
Sbjct: 55  TGCLREQLGVPSGERHELCRGLHAEQNAIIQAA--YHGVEIQGTTLYVTLQPCVLCAKML 112

Query: 91  SLARIRRLYY 100
             A ++RL +
Sbjct: 113 INAGVKRLVF 122


>gi|124262738|ref|YP_001023208.1| deoxycytidylate deaminase-like protein [Methylibium petroleiphilum
           PM1]
 gi|124266394|ref|YP_001020398.1| deoxycytidylate deaminase-like protein [Methylibium petroleiphilum
           PM1]
 gi|124259169|gb|ABM94163.1| deoxycytidylate deaminase-like protein [Methylibium petroleiphilum
           PM1]
 gi|124261984|gb|ABM96973.1| deoxycytidylate deaminase-like protein [Methylibium petroleiphilum
           PM1]
          Length = 187

 Score = 66.1 bits (161), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 31/124 (25%), Positives = 48/124 (38%), Gaps = 32/124 (25%)

Query: 1   MKKGNVFMSCALEEA---QNAALRNEIPVGAVAV-LNNKIISRAGN---RNRELKDVTA- 52
           +   ++FM  A+  A   ++A  RN    GA     +NKI+    N   R  +  D +  
Sbjct: 7   IDWHSMFMGVAMLAAARSKDARKRN----GACIASADNKILGVGYNGLPRGCDDDDPSYW 62

Query: 53  ----------------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIR 96
                           HAE+ AI   C +L    L    +Y T  PC  C  +I    I+
Sbjct: 63  ADVDDDPVQSRHSYIVHAEVNAILN-CVVLP---LTGSTIYTTQFPCPRCVQSIIQVGIK 118

Query: 97  RLYY 100
           R+ +
Sbjct: 119 RVVF 122


>gi|269928636|ref|YP_003320957.1| CMP/dCMP deaminase zinc-binding protein [Sphaerobacter thermophilus
           DSM 20745]
 gi|269787993|gb|ACZ40135.1| CMP/dCMP deaminase zinc-binding protein [Sphaerobacter thermophilus
           DSM 20745]
          Length = 191

 Score = 66.1 bits (161), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 27/125 (21%), Positives = 42/125 (33%), Gaps = 28/125 (22%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRN--------RELKDVTA 52
           M +   +M  A+   + A+      VGAV VL +++I+   N              D  A
Sbjct: 12  MARDEYYMRLAMAVRERASCLGSR-VGAVLVLQDRVIATGYNGTPMGMKNCDEGGCDRCA 70

Query: 53  -----------------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARI 95
                            HAE   +    R           +Y T++PC  C   +  A I
Sbjct: 71  HPERYPAGQGYDACICVHAEQNLLLTAARFGIAVR--GAVVYTTMQPCFGCLKELLQAEI 128

Query: 96  RRLYY 100
             +YY
Sbjct: 129 EAVYY 133


>gi|30264397|ref|NP_846774.1| ComE operon protein 2 [Bacillus anthracis str. Ames]
 gi|42783453|ref|NP_980700.1| ComE operon protein 2 [Bacillus cereus ATCC 10987]
 gi|47569322|ref|ZP_00240006.1| comE operon protein 2 [Bacillus cereus G9241]
 gi|47778306|ref|YP_022694.1| ComE operon protein 2 [Bacillus anthracis str. 'Ames Ancestor']
 gi|49187220|ref|YP_030472.1| ComE operon protein 2 [Bacillus anthracis str. Sterne]
 gi|49481368|ref|YP_038380.1| comE operon protein 2 [Bacillus thuringiensis serovar konkukian
           str. 97-27]
 gi|65321698|ref|ZP_00394657.1| COG2131: Deoxycytidylate deaminase [Bacillus anthracis str. A2012]
 gi|165872069|ref|ZP_02216709.1| ComE operon protein 2 [Bacillus anthracis str. A0488]
 gi|167634581|ref|ZP_02392901.1| ComE operon protein 2 [Bacillus anthracis str. A0442]
 gi|167638591|ref|ZP_02396867.1| ComE operon protein 2 [Bacillus anthracis str. A0193]
 gi|170687331|ref|ZP_02878548.1| ComE operon protein 2 [Bacillus anthracis str. A0465]
 gi|170707358|ref|ZP_02897812.1| ComE operon protein 2 [Bacillus anthracis str. A0389]
 gi|177653276|ref|ZP_02935528.1| ComE operon protein 2 [Bacillus anthracis str. A0174]
 gi|190566854|ref|ZP_03019770.1| ComE operon protein 2 [Bacillus anthracis Tsiankovskii-I]
 gi|196034327|ref|ZP_03101736.1| ComE operon protein 2 [Bacillus cereus W]
 gi|196039164|ref|ZP_03106470.1| ComE operon protein 2 [Bacillus cereus NVH0597-99]
 gi|196044885|ref|ZP_03112119.1| ComE operon protein 2 [Bacillus cereus 03BB108]
 gi|206975981|ref|ZP_03236891.1| ComE operon protein 2 [Bacillus cereus H3081.97]
 gi|217961816|ref|YP_002340386.1| ComE operon protein 2 [Bacillus cereus AH187]
 gi|222097771|ref|YP_002531828.1| come operon protein 2 [Bacillus cereus Q1]
 gi|227817103|ref|YP_002817112.1| ComE operon protein 2 [Bacillus anthracis str. CDC 684]
 gi|229603209|ref|YP_002868616.1| ComE operon protein 2 [Bacillus anthracis str. A0248]
 gi|254684083|ref|ZP_05147943.1| comE operon protein 2 [Bacillus anthracis str. CNEVA-9066]
 gi|254721917|ref|ZP_05183706.1| comE operon protein 2 [Bacillus anthracis str. A1055]
 gi|254736431|ref|ZP_05194137.1| comE operon protein 2 [Bacillus anthracis str. Western North
           America USA6153]
 gi|254741468|ref|ZP_05199155.1| comE operon protein 2 [Bacillus anthracis str. Kruger B]
 gi|254750907|ref|ZP_05202946.1| comE operon protein 2 [Bacillus anthracis str. Vollum]
 gi|254757765|ref|ZP_05209792.1| comE operon protein 2 [Bacillus anthracis str. Australia 94]
 gi|300118681|ref|ZP_07056409.1| ComE operon protein 2 [Bacillus cereus SJ1]
 gi|301055818|ref|YP_003794029.1| ComE operon protein 2 [Bacillus anthracis CI]
 gi|30259055|gb|AAP28260.1| ComE operon protein 2 [Bacillus anthracis str. Ames]
 gi|42739382|gb|AAS43308.1| ComE operon protein 2 [Bacillus cereus ATCC 10987]
 gi|47552011|gb|AAT35428.1| ComE operon protein 2 [Bacillus anthracis str. 'Ames Ancestor']
 gi|47553993|gb|EAL12360.1| comE operon protein 2 [Bacillus cereus G9241]
 gi|49181147|gb|AAT56523.1| ComE operon protein 2 [Bacillus anthracis str. Sterne]
 gi|49332924|gb|AAT63570.1| comE operon protein 2 [Bacillus thuringiensis serovar konkukian
           str. 97-27]
 gi|164712200|gb|EDR17737.1| ComE operon protein 2 [Bacillus anthracis str. A0488]
 gi|167513439|gb|EDR88809.1| ComE operon protein 2 [Bacillus anthracis str. A0193]
 gi|167530033|gb|EDR92768.1| ComE operon protein 2 [Bacillus anthracis str. A0442]
 gi|170127602|gb|EDS96475.1| ComE operon protein 2 [Bacillus anthracis str. A0389]
 gi|170668526|gb|EDT19272.1| ComE operon protein 2 [Bacillus anthracis str. A0465]
 gi|172081558|gb|EDT66630.1| ComE operon protein 2 [Bacillus anthracis str. A0174]
 gi|190561845|gb|EDV15814.1| ComE operon protein 2 [Bacillus anthracis Tsiankovskii-I]
 gi|195992869|gb|EDX56828.1| ComE operon protein 2 [Bacillus cereus W]
 gi|196024373|gb|EDX63046.1| ComE operon protein 2 [Bacillus cereus 03BB108]
 gi|196029791|gb|EDX68392.1| ComE operon protein 2 [Bacillus cereus NVH0597-99]
 gi|206745733|gb|EDZ57130.1| ComE operon protein 2 [Bacillus cereus H3081.97]
 gi|217065815|gb|ACJ80065.1| ComE operon protein 2 [Bacillus cereus AH187]
 gi|221241829|gb|ACM14539.1| comE operon protein 2 [Bacillus cereus Q1]
 gi|227007781|gb|ACP17524.1| ComE operon protein 2 [Bacillus anthracis str. CDC 684]
 gi|229267617|gb|ACQ49254.1| ComE operon protein 2 [Bacillus anthracis str. A0248]
 gi|298723930|gb|EFI64644.1| ComE operon protein 2 [Bacillus cereus SJ1]
 gi|300377987|gb|ADK06891.1| comE operon protein 2 [Bacillus cereus biovar anthracis str. CI]
 gi|324328230|gb|ADY23490.1| ComE operon protein 2 [Bacillus thuringiensis serovar finitimus
           YBT-020]
          Length = 185

 Score = 66.1 bits (161), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 25/91 (27%), Positives = 38/91 (41%), Gaps = 17/91 (18%)

Query: 26  VGAVAVLNNKIISRAGNRNRELK-----DV----------TAHAEILAIRMGCRILSQEI 70
           VGA  V + +II+   N + +       D           T HAE+ A+    +   +  
Sbjct: 28  VGATIVRDKRIIAGGYNGSIKGGVHCIDDGCYVIDNHCVRTIHAEMNALLQCAKFGVKT- 86

Query: 71  LPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
             E ++YVT  PC  C  AI  + I  +YY 
Sbjct: 87  -EEAEIYVTHFPCLQCCKAIIQSGITAVYYA 116


>gi|303257995|ref|ZP_07344004.1| cytidine/deoxycytidylate deaminase family protein [Burkholderiales
           bacterium 1_1_47]
 gi|302859338|gb|EFL82420.1| cytidine/deoxycytidylate deaminase family protein [Burkholderiales
           bacterium 1_1_47]
          Length = 138

 Score = 66.1 bits (161), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 30/114 (26%), Positives = 44/114 (38%), Gaps = 18/114 (15%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKD-----------V 50
           K   ++M+ A   AQ +  +  + VG V V N+ IIS   N      D           V
Sbjct: 5   KDNEMYMTIAQIAAQRSYAKR-LKVGCVIVKNHSIISFGWNGMPTGYDNCCEYEVDGKLV 63

Query: 51  TA----HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
           T     HAE+ AI       +        +++T  PC  C+  I    I  +YY
Sbjct: 64  TRPEVQHAELNAI--AKLAQNGYSSNGAKIFITHSPCIHCSLLIQKCGINEVYY 115


>gi|281210463|gb|EFA84629.1| CMP/dCMP deaminase [Polysphondylium pallidum PN500]
          Length = 253

 Score = 66.1 bits (161), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 29/109 (26%), Positives = 34/109 (31%), Gaps = 16/109 (14%)

Query: 9   SCALEEAQ----------NAALRNEIP---VGAVAVL-NNKIISRAGNRNRELKDVTAHA 54
             A  EA+               N+IP     A  V  N   I    NR         H 
Sbjct: 42  ELAFHEAKMMEIAQYAINETYHNNKIPNAIFTASIVHPNGTTICMDRNRGE--DSSIRHG 99

Query: 55  EILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
           E   I        +       LY T E C MC AAI  A   ++ YG S
Sbjct: 100 ETQVILACSEKFKKNTWKGYYLYTTGESCPMCQAAIMWAGFDKVIYGTS 148


>gi|33603318|ref|NP_890878.1| riboflavin biosynthesis protein ribd [includes:
           diaminohydroxyphosphoribosylaminopyrimidine deaminase
           [Bordetella bronchiseptica RB50]
 gi|33577442|emb|CAE34707.1| riboflavin biosynthesis protein ribd [includes:
           diaminohydroxyphosphoribosylaminopyrimidine deaminase
           [Bordetella bronchiseptica RB50]
          Length = 374

 Score = 66.1 bits (161), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 30/145 (20%), Positives = 50/145 (34%), Gaps = 18/145 (12%)

Query: 8   MSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M  AL  A++        P VG V V + +++     +         HAE+ A+R     
Sbjct: 1   MRRALALARSVMYSTAPNPRVGCVIVRDGQVLGEGATQPPGG----PHAEVCALREAAAR 56

Query: 66  LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
            +   L    +YVTLEPC        C  A++ A   R+     +P       G      
Sbjct: 57  GAS--LAGATVYVTLEPCSHFGRTPPCVDALAAAAPARVVVAMGDPNPRVNGQGLARLRA 114

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDF 144
           A       +   +    + ++   F
Sbjct: 115 AG----IAVTEDVCRDEALELNAGF 135


>gi|160944642|ref|ZP_02091869.1| hypothetical protein FAEPRAM212_02155 [Faecalibacterium prausnitzii
           M21/2]
 gi|158443826|gb|EDP20830.1| hypothetical protein FAEPRAM212_02155 [Faecalibacterium prausnitzii
           M21/2]
 gi|295104361|emb|CBL01905.1| Deoxycytidylate deaminase [Faecalibacterium prausnitzii SL3/3]
          Length = 159

 Score = 66.1 bits (161), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 32/119 (26%), Positives = 39/119 (32%), Gaps = 24/119 (20%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRN-----------RELK 48
           +     FM  AL  A  +   N   VGA  V   NKI+S   N                 
Sbjct: 7   INWDEYFMGIALLTAMRSKDPNSQ-VGACIVSPENKILSLGYNGMPMGCSDDEMPWEREG 65

Query: 49  DVTA-------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
                      HAE+ AI           L    +YVTL PC  C  AI  + I  + Y
Sbjct: 66  APLQTKYMYVCHAELNAILNSAHN----NLKGARVYVTLFPCNECTKAIIQSGIAEVVY 120


>gi|254303368|ref|ZP_04970726.1| dCMP deaminase [Fusobacterium nucleatum subsp. polymorphum ATCC
           10953]
 gi|148323560|gb|EDK88810.1| dCMP deaminase [Fusobacterium nucleatum subsp. polymorphum ATCC
           10953]
          Length = 161

 Score = 66.1 bits (161), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 29/122 (23%), Positives = 45/122 (36%), Gaps = 31/122 (25%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNK-IISRAGNRNRELKD------- 49
           +   + FM  A+  +  +      P   VGA  V  +K I+    N   +  D       
Sbjct: 6   INWDSYFMGIAILSSMRSKD----PNTQVGACIVNEDKRIVGVGYNGLPKGCDDKEFPWE 61

Query: 50  ----------V-TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98
                         HAE+ AI     + S + L +  +YV L PC  C  AI  + I+ +
Sbjct: 62  RDGEFLNTKYPYVCHAELNAI-----LNSIKSLKDCIIYVALFPCHECTKAIIQSGIKEI 116

Query: 99  YY 100
            Y
Sbjct: 117 VY 118


>gi|58389825|ref|XP_317305.2| AGAP008158-PA [Anopheles gambiae str. PEST]
 gi|55237525|gb|EAA12688.2| AGAP008158-PA [Anopheles gambiae str. PEST]
          Length = 180

 Score = 66.1 bits (161), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 28/119 (23%), Positives = 43/119 (36%), Gaps = 31/119 (26%)

Query: 5   NVFMSCALEEAQNAALRNEIP---VGAVAV-LNNKIISRAGNR------------NRELK 48
             FM+ A   A+ +      P   VGA  V  +N+I+    N             ++   
Sbjct: 31  ECFMAMAFLAAKRSKD----PSTQVGACIVNEDNRIVGIGYNGFPKGCSDDEFPWSKTSD 86

Query: 49  DVT-------AHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
           +          HAE+ AI       +   +    +YV L PC  CA  I  + IR + Y
Sbjct: 87  NPLETKYLYVCHAEVNAILN----KNSTDVRNCTMYVALFPCNECAKIIIQSAIREVVY 141


>gi|241896673|ref|ZP_04783969.1| competence protein ComEB [Weissella paramesenteroides ATCC 33313]
 gi|241870154|gb|EER73905.1| competence protein ComEB [Weissella paramesenteroides ATCC 33313]
          Length = 157

 Score = 66.1 bits (161), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 25/110 (22%), Positives = 41/110 (37%), Gaps = 18/110 (16%)

Query: 6   VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGN--------------RNRELKDVT 51
            FM  A+  A  +       VGAV V + +II+   N                 +   + 
Sbjct: 11  YFMLQAIMLAARSTCTRLH-VGAVVVKDGRIIASGYNGSVSGTPHCTEVGDLVVDGHCIR 69

Query: 52  A-HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
           A HAE  A+    ++          ++VT  PC  C   +  A I+++ Y
Sbjct: 70  AVHAEQNALMQLAKMGISAD--GAQVFVTDFPCVHCTKLLLQAGIKKINY 117


>gi|227894427|ref|ZP_04012232.1| competence protein ComEB [Lactobacillus ultunensis DSM 16047]
 gi|227863797|gb|EEJ71218.1| competence protein ComEB [Lactobacillus ultunensis DSM 16047]
          Length = 159

 Score = 66.1 bits (161), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 28/111 (25%), Positives = 47/111 (42%), Gaps = 18/111 (16%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELK----DV---------- 50
             FM  AL  AQ +     + VG+V V +++II    N +   +    DV          
Sbjct: 9   QYFMIQALVIAQRSTCNRAL-VGSVLVKDHRIIGTGYNGSVSGQPHCDDVGHQMVDGHCV 67

Query: 51  -TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
            T H+E+ AI    +          ++YVT  PC  C  ++  A ++++ Y
Sbjct: 68  RTIHSEMNAIIQCAKFGVST--ENTEIYVTHFPCYNCCKSLLQAGVKKINY 116


>gi|115385499|ref|XP_001209296.1| hypothetical protein ATEG_09994 [Aspergillus terreus NIH2624]
 gi|114187743|gb|EAU29443.1| hypothetical protein ATEG_09994 [Aspergillus terreus NIH2624]
          Length = 163

 Score = 66.1 bits (161), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 27/97 (27%), Positives = 33/97 (34%), Gaps = 10/97 (10%)

Query: 52  AHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNP---KGG 108
            HAE    R      + E L    L  T EPC MCA  I  A I RL Y AS     K  
Sbjct: 55  RHAECELARNAADNFAPEYLARSTLVSTWEPCAMCAGTIYWANIGRLVYLASEKELQKVV 114

Query: 109 GIENGTQFYTLATCH-------HSPEIYPGISEQRSR 138
           G  N         C           E+   ++   ++
Sbjct: 115 GDGNPENLTLDLPCRTVFDRGQRKVEVIGPVAGWEAK 151


>gi|332367208|gb|EGJ44944.1| cytidine and deoxycytidylate deaminase [Streptococcus sanguinis
           SK1059]
          Length = 155

 Score = 66.1 bits (161), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 31/117 (26%), Positives = 41/117 (35%), Gaps = 29/117 (24%)

Query: 4   GNVFMSCALEEA-----QNAALRNEIPVGAVAVLNNKIISRAGNRNRELK---------- 48
              F + AL  A     + A       VGAV V +NK+IS   N +              
Sbjct: 9   DQYFAAQALLIANRSTCKRAK------VGAVLVKDNKVISTGYNGSVSGTEHCIDHECLV 62

Query: 49  -DV----TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
            D     T HAE+ AI  G      +       YVT  PC  C   +     +R+ Y
Sbjct: 63  IDGHCVRTLHAEVNAILQGADRGVPK---GFTAYVTHFPCLNCTKQLLQVGCKRVVY 116


>gi|125718308|ref|YP_001035441.1| dCMP deaminase [Streptococcus sanguinis SK36]
 gi|323351275|ref|ZP_08086931.1| cytidine and deoxycytidylate deaminase [Streptococcus sanguinis
           VMC66]
 gi|125498225|gb|ABN44891.1| DCMP deaminase, putative [Streptococcus sanguinis SK36]
 gi|322122499|gb|EFX94210.1| cytidine and deoxycytidylate deaminase [Streptococcus sanguinis
           VMC66]
 gi|324991558|gb|EGC23491.1| cytidine and deoxycytidylate deaminase [Streptococcus sanguinis
           SK353]
 gi|324993919|gb|EGC25838.1| cytidine and deoxycytidylate deaminase [Streptococcus sanguinis
           SK405]
 gi|324994762|gb|EGC26675.1| cytidine and deoxycytidylate deaminase [Streptococcus sanguinis
           SK678]
 gi|325687201|gb|EGD29223.1| cytidine and deoxycytidylate deaminase [Streptococcus sanguinis
           SK72]
 gi|325694913|gb|EGD36818.1| cytidine and deoxycytidylate deaminase [Streptococcus sanguinis
           SK150]
 gi|325696064|gb|EGD37955.1| cytidine and deoxycytidylate deaminase [Streptococcus sanguinis
           SK160]
 gi|327463181|gb|EGF09502.1| cytidine and deoxycytidylate deaminase [Streptococcus sanguinis
           SK1]
 gi|327474790|gb|EGF20195.1| cytidine and deoxycytidylate deaminase [Streptococcus sanguinis
           SK408]
 gi|328946547|gb|EGG40686.1| cytidine and deoxycytidylate deaminase [Streptococcus sanguinis
           SK1087]
 gi|332359448|gb|EGJ37268.1| cytidine and deoxycytidylate deaminase [Streptococcus sanguinis
           SK355]
 gi|332361943|gb|EGJ39745.1| cytidine and deoxycytidylate deaminase [Streptococcus sanguinis
           SK49]
 gi|332362515|gb|EGJ40315.1| cytidine and deoxycytidylate deaminase [Streptococcus sanguinis
           SK1056]
          Length = 155

 Score = 66.1 bits (161), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 31/117 (26%), Positives = 41/117 (35%), Gaps = 29/117 (24%)

Query: 4   GNVFMSCALEEA-----QNAALRNEIPVGAVAVLNNKIISRAGNRNRELK---------- 48
              F + AL  A     + A       VGAV V +NK+IS   N +              
Sbjct: 9   DQYFAAQALLIANRSTCKRAK------VGAVLVKDNKVISTGYNGSVSGTEHCIDHECLV 62

Query: 49  -DV----TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
            D     T HAE+ AI  G      +       YVT  PC  C   +     +R+ Y
Sbjct: 63  IDGHCVRTLHAEVNAILQGAERGVPK---GFTAYVTHFPCLNCTKQLLQVGCKRVVY 116


>gi|327470713|gb|EGF16169.1| cytidine and deoxycytidylate deaminase [Streptococcus sanguinis
           SK330]
          Length = 155

 Score = 66.1 bits (161), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 31/117 (26%), Positives = 41/117 (35%), Gaps = 29/117 (24%)

Query: 4   GNVFMSCALEEA-----QNAALRNEIPVGAVAVLNNKIISRAGNRNRELK---------- 48
              F + AL  A     + A       VGAV V +NK+IS   N +              
Sbjct: 9   DQYFAAQALLIANRSTCKRAK------VGAVLVKDNKVISTGYNGSVSGTEHCIDHECLV 62

Query: 49  -DV----TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
            D     T HAE+ AI  G      +       YVT  PC  C   +     +R+ Y
Sbjct: 63  IDGHCVRTLHAEVNAILQGAERGVPK---GFTAYVTHFPCLNCTKQLLQVGCKRVVY 116


>gi|190349179|gb|EDK41782.2| hypothetical protein PGUG_05880 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 365

 Score = 66.1 bits (161), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 18/65 (27%), Positives = 34/65 (52%)

Query: 76  LYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQ 135
           +Y + EPC MC  A+  +RI ++ Y    P  GG+E+  Q     + +   +I+  I E+
Sbjct: 287 VYTSHEPCIMCCMALVHSRISKITYIKPVPSTGGLESHYQLGDRPSLNWRFKIWKWIGEE 346

Query: 136 RSRQI 140
             +++
Sbjct: 347 EMQKL 351


>gi|146412291|ref|XP_001482117.1| hypothetical protein PGUG_05880 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 365

 Score = 66.1 bits (161), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 18/65 (27%), Positives = 34/65 (52%)

Query: 76  LYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQ 135
           +Y + EPC MC  A+  +RI ++ Y    P  GG+E+  Q     + +   +I+  I E+
Sbjct: 287 VYTSHEPCIMCCMALVHSRISKITYIKPVPSTGGLESHYQLGDRPSLNWRFKIWKWIGEE 346

Query: 136 RSRQI 140
             +++
Sbjct: 347 EMQKL 351


>gi|317471969|ref|ZP_07931301.1| cytidine and deoxycytidylate deaminase zinc-binding protein
           [Anaerostipes sp. 3_2_56FAA]
 gi|316900373|gb|EFV22355.1| cytidine and deoxycytidylate deaminase zinc-binding protein
           [Anaerostipes sp. 3_2_56FAA]
          Length = 170

 Score = 65.7 bits (160), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 35/119 (29%), Positives = 46/119 (38%), Gaps = 24/119 (20%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGN--------------RNR 45
           +     FM  AL  AQ +   +   VGA  V + NKI+S   N              R  
Sbjct: 18  LSWDQYFMGVALLSAQRSKD-DHTQVGACLVNDQNKILSVGYNGMPTGCHDDDMPWEREG 76

Query: 46  ELKDV----TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
           E  D       HAE+ AI           L    +YVTL PC  CA AI  + ++ + Y
Sbjct: 77  EPLDTKYFYVCHAELNAILN----YGGGSLYGARVYVTLFPCNECAKAIIQSGMKEVIY 131


>gi|167753725|ref|ZP_02425852.1| hypothetical protein ALIPUT_02006 [Alistipes putredinis DSM 17216]
 gi|167658350|gb|EDS02480.1| hypothetical protein ALIPUT_02006 [Alistipes putredinis DSM 17216]
          Length = 360

 Score = 65.7 bits (160), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 28/139 (20%), Positives = 47/139 (33%), Gaps = 27/139 (19%)

Query: 3   KGNVFMSCALEEAQNAALRNEIP------VGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56
           +   ++  A++E++        P      VGAV +  ++ I             T HAE 
Sbjct: 216 EDRRYLQMAIDESRKC-----TPSTSSYCVGAVILTTDRKIFTGY---THETSPTHHAEQ 267

Query: 57  LAIRMGCRILSQEILPEVDLYVTLEPCT-------MCAAAISLARIRRLYYGASNPKGGG 109
            AI        +  L    +Y ++EPC+        C+  I     RR+ +    P    
Sbjct: 268 EAILKALAAGVE--LRGATIYSSMEPCSERKSEPESCSELIIRHEFRRVVFALYEPDCFV 325

Query: 110 IENGTQFYTLATCHHSPEI 128
              G     L    H  E+
Sbjct: 326 CCQGA--LNLRR--HRIEV 340


>gi|170728271|ref|YP_001762297.1| zinc-binding CMP/dCMP deaminase [Shewanella woodyi ATCC 51908]
 gi|169813618|gb|ACA88202.1| CMP/dCMP deaminase zinc-binding [Shewanella woodyi ATCC 51908]
          Length = 145

 Score = 65.7 bits (160), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 24/86 (27%), Positives = 32/86 (37%), Gaps = 18/86 (20%)

Query: 26  VGAVAVLNNKIISRAGN-------------RNRELKDVTAHAEILAIRMGCRILSQEILP 72
           VGAV   +N+I+S   N                     T HAE  AI    R      L 
Sbjct: 27  VGAVITEDNRIVSLGFNGYPHGISDSAETDNREMKLLKTLHAEENAILYAKR-----DLS 81

Query: 73  EVDLYVTLEPCTMCAAAISLARIRRL 98
             +++VT  PC  CAA I    +  +
Sbjct: 82  GCEIWVTHFPCPNCAAKIIQTGLTTV 107


>gi|325286502|ref|YP_004262292.1| CMP/dCMP deaminase zinc-binding protein [Cellulophaga lytica DSM
           7489]
 gi|324321956|gb|ADY29421.1| CMP/dCMP deaminase zinc-binding protein [Cellulophaga lytica DSM
           7489]
          Length = 146

 Score = 65.7 bits (160), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 28/116 (24%), Positives = 40/116 (34%), Gaps = 25/116 (21%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTA--------- 52
           K    ++  A E  + +  + +  VGA+ V +  IIS   N        T          
Sbjct: 14  KYDEAYLRMAQEWGKLSYCKRKQ-VGAIIVKDRMIISDGYNGT-----PTGFENICEDEE 67

Query: 53  --------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
                   HAE  AI                LY+TL PC  C+  I  + I R+ Y
Sbjct: 68  GYTKWYVLHAEANAISKVASSTQS--CTGATLYITLSPCKECSKLIHQSGIVRVVY 121


>gi|218680684|ref|ZP_03528581.1| 5-amino-6-(5-phosphoribosylamino)uracil
           reductase/diaminohydroxyphosphoribosylaminopyrimidinedea
           [Rhizobium etli CIAT 894]
          Length = 307

 Score = 65.7 bits (160), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 26/117 (22%), Positives = 41/117 (35%), Gaps = 19/117 (16%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC-- 83
           VG + V ++ ++ +A            HAE  A+       + E       YVTLEPC  
Sbjct: 1   VGCLIVKDSVVVGQAVTAVGGR----PHAEPQAL-----AEAGEAARGATAYVTLEPCSH 51

Query: 84  ----TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQR 136
                 CA A+    + R+    ++P       G      A      E+  G+ E  
Sbjct: 52  HGKTPPCAEALIAYGVARVVISVTDPDPRVSGRGIAMLREAG----IEVDAGVLEAE 104


>gi|269968353|ref|ZP_06182372.1| deoxycytidylate deaminase, putative [Vibrio alginolyticus 40B]
 gi|269827039|gb|EEZ81354.1| deoxycytidylate deaminase, putative [Vibrio alginolyticus 40B]
          Length = 156

 Score = 65.7 bits (160), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 30/114 (26%), Positives = 43/114 (37%), Gaps = 21/114 (18%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGN-------------RN 44
           M   + +     + A+  A  ++ P   VGAV    N+I+S   N               
Sbjct: 1   MTMISKWAKRFYQMAELVASWSKDPSTQVGAVITKQNRIVSVGFNGYPHGVSDSVDTDER 60

Query: 45  RELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98
                 T HAE  AI     + S+  L   D++VT  PC  CAA I    I  +
Sbjct: 61  ELKYLKTLHAEENAI-----LFSKRDLDGCDIWVTHFPCPNCAAKIIQTGISHV 109


>gi|325970393|ref|YP_004246584.1| dCMP deaminase [Spirochaeta sp. Buddy]
 gi|324025631|gb|ADY12390.1| dCMP deaminase [Spirochaeta sp. Buddy]
          Length = 161

 Score = 65.7 bits (160), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 31/122 (25%), Positives = 42/122 (34%), Gaps = 30/122 (24%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAV-LNNKIISRAGN-------------- 42
           +     FM  A+  +  +      P   VGA  +  ++KI+    N              
Sbjct: 8   ISWDEYFMGVAVLSSMRSKD----PSTQVGACIINADHKIVGVGYNGFPIGVNDDEVPWE 63

Query: 43  RNRELKDV----TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98
           R     D       HAE+ AI           L    LYV L PC  CA AI  + IR +
Sbjct: 64  REGAWLDTKYPYVCHAELNAILNA----ISSSLKGCSLYVGLFPCNECAKAIIQSGIREV 119

Query: 99  YY 100
            Y
Sbjct: 120 VY 121


>gi|210614123|ref|ZP_03290059.1| hypothetical protein CLONEX_02272 [Clostridium nexile DSM 1787]
 gi|210150824|gb|EEA81832.1| hypothetical protein CLONEX_02272 [Clostridium nexile DSM 1787]
          Length = 162

 Score = 65.7 bits (160), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 34/126 (26%), Positives = 45/126 (35%), Gaps = 31/126 (24%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVL-NNKIISRAGNR------------N 44
           +     FM  A+     +      P   VG   V  +NKI+S   N              
Sbjct: 9   ISWDEYFMGVAMLSGMRSKD----PSTQVGCCIVSQDNKILSMGYNGFPIGCSDDEFPWE 64

Query: 45  RELKDV-------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRR 97
           RE  D        + H+E+ AI       S   L    LYV+L PC  CA AI  + IR 
Sbjct: 65  REGDDPLETKYLYSTHSELNAILN----YSGGSLAGAKLYVSLFPCNECAKAIIQSGIRE 120

Query: 98  LYYGAS 103
           + Y   
Sbjct: 121 VIYDCD 126


>gi|167748501|ref|ZP_02420628.1| hypothetical protein ANACAC_03245 [Anaerostipes caccae DSM 14662]
 gi|167652493|gb|EDR96622.1| hypothetical protein ANACAC_03245 [Anaerostipes caccae DSM 14662]
          Length = 170

 Score = 65.7 bits (160), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 35/119 (29%), Positives = 46/119 (38%), Gaps = 24/119 (20%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGN--------------RNR 45
           +     FM  AL  AQ +   +   VGA  V + NKI+S   N              R  
Sbjct: 18  LSWDQYFMGVALLSAQRSKD-DHTQVGACLVNDQNKILSVGYNGMPTGCHDDDMPWEREG 76

Query: 46  ELKDV----TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
           E  D       HAE+ AI           L    +YVTL PC  CA AI  + ++ + Y
Sbjct: 77  EPLDTKYFYVCHAELNAILN----YGGGSLYGARVYVTLFPCNECAKAIIQSGMKEVIY 131


>gi|153837138|ref|ZP_01989805.1| deoxycytidylate deaminase [Vibrio parahaemolyticus AQ3810]
 gi|149749555|gb|EDM60301.1| deoxycytidylate deaminase [Vibrio parahaemolyticus AQ3810]
          Length = 154

 Score = 65.7 bits (160), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 26/86 (30%), Positives = 33/86 (38%), Gaps = 18/86 (20%)

Query: 26  VGAVAVLNNKIISRAGN-------------RNRELKDVTAHAEILAIRMGCRILSQEILP 72
           VGAV    N+I+S   N                     T HAE  AI     + S+  L 
Sbjct: 27  VGAVITKQNRIVSVGFNGYPHGVSDSVDTDERELKYLKTLHAEENAI-----LFSKRDLD 81

Query: 73  EVDLYVTLEPCTMCAAAISLARIRRL 98
             D++VT  PC  CAA I    I  +
Sbjct: 82  GCDIWVTHFPCPNCAAKIIQTGISHV 107


>gi|124514350|gb|EAY55863.1| riboflavin biosynthesis protein RibD [Leptospirillum rubarum]
          Length = 388

 Score = 65.7 bits (160), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 39/157 (24%), Positives = 60/157 (38%), Gaps = 29/157 (18%)

Query: 1   MKKGNV-FMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAE 55
           M +    FM+ AL+ A  A  R+++   P VGAV V   +++ R  +    L     HAE
Sbjct: 1   MLRDEKVFMAMALDLAMMA--RDDVAPNPRVGAVVVRKGRVVGRGYHERPGL----PHAE 54

Query: 56  ILAIRMGC-RILSQEILPEVDLYVTLEPC-------TMCAAAISLARIRRLYYGASNPKG 107
           +LA+R    R           LYV LEPC         C   I  + I R+    S+P  
Sbjct: 55  VLALREAGERA------RGATLYVNLEPCCHLNKRTPPCTREILSSGIGRVVISLSDPNP 108

Query: 108 GGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
                G              +  G+   ++  + + F
Sbjct: 109 HVNGKGILELREGG----VSVETGLLAPQAFAVNRGF 141


>gi|91223974|ref|ZP_01259237.1| putative deoxycytidylate deaminase [Vibrio alginolyticus 12G01]
 gi|254227760|ref|ZP_04921191.1| Deoxycytidylate deaminase [Vibrio sp. Ex25]
 gi|262395803|ref|YP_003287656.1| deoxycytidylate deaminase [Vibrio sp. Ex25]
 gi|91190885|gb|EAS77151.1| putative deoxycytidylate deaminase [Vibrio alginolyticus 12G01]
 gi|151939802|gb|EDN58629.1| Deoxycytidylate deaminase [Vibrio sp. Ex25]
 gi|262339397|gb|ACY53191.1| deoxycytidylate deaminase [Vibrio sp. Ex25]
          Length = 154

 Score = 65.7 bits (160), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 26/86 (30%), Positives = 33/86 (38%), Gaps = 18/86 (20%)

Query: 26  VGAVAVLNNKIISRAGN-------------RNRELKDVTAHAEILAIRMGCRILSQEILP 72
           VGAV    N+I+S   N                     T HAE  AI     + S+  L 
Sbjct: 27  VGAVITKQNRIVSVGFNGYPHGVSDSVDTDERELKYLKTLHAEENAI-----LFSKRDLD 81

Query: 73  EVDLYVTLEPCTMCAAAISLARIRRL 98
             D++VT  PC  CAA I    I  +
Sbjct: 82  GCDIWVTHFPCPNCAAKIIQTGISHV 107


>gi|157150018|ref|YP_001450270.1| ComE operon family protein [Streptococcus gordonii str. Challis
           substr. CH1]
 gi|157074812|gb|ABV09495.1| comE operon protein 2 family [Streptococcus gordonii str. Challis
           substr. CH1]
          Length = 155

 Score = 65.7 bits (160), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 29/112 (25%), Positives = 41/112 (36%), Gaps = 19/112 (16%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKD-------------- 49
              F + AL  A  +  +    VGAV V +NK+IS   N +    +              
Sbjct: 9   DEYFAAQALLIANRSTCKRAR-VGAVLVKDNKVISTGYNGSVSGTEHCIDHECLIIDGHC 67

Query: 50  -VTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
             T HAE+ AI  G      +       YVT  PC  C   +     +R+ Y
Sbjct: 68  VRTLHAEVNAILQGAERGVPK---GFTAYVTHFPCLNCTKQLLQVGCKRVVY 116


>gi|2258167|gb|AAB64529.1| Ylr316cp [Saccharomyces cerevisiae]
 gi|207342844|gb|EDZ70483.1| YLR316Cp-like protein [Saccharomyces cerevisiae AWRI1631]
 gi|323303779|gb|EGA57563.1| Tad3p [Saccharomyces cerevisiae FostersB]
 gi|323307960|gb|EGA61217.1| Tad3p [Saccharomyces cerevisiae FostersO]
 gi|323336362|gb|EGA77630.1| Tad3p [Saccharomyces cerevisiae Vin13]
 gi|323353850|gb|EGA85705.1| Tad3p [Saccharomyces cerevisiae VL3]
          Length = 163

 Score = 65.7 bits (160), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 26/125 (20%), Positives = 53/125 (42%), Gaps = 19/125 (15%)

Query: 28  AVAV----LNNKIISR-AGNRNRELKDVTAHAEILAIRMGCRIL--------SQEILPEV 74
           +V V      +K+++    N    L     H+ ++ IR     L        +  +  + 
Sbjct: 29  SVFVDPSRKKDKVVAEDGRNCENSL--PIDHSVMVGIRAVGERLREGVDEDANSYLCLDY 86

Query: 75  DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI----ENGTQFYTLATCHHSPEIYP 130
           D+Y+T EPC+MC+ A+  +R+RR+ +     + G +     +G         + + E + 
Sbjct: 87  DVYLTHEPCSMCSMALIHSRVRRVVFLTEMQRTGSLKLTSGDGYCMNDNKQLNSTYEAFQ 146

Query: 131 GISEQ 135
            I E+
Sbjct: 147 WIGEE 151


>gi|9759207|dbj|BAB09649.1| unnamed protein product [Arabidopsis thaliana]
          Length = 438

 Score = 65.7 bits (160), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 16/77 (20%), Positives = 34/77 (44%), Gaps = 6/77 (7%)

Query: 72  PEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
              D+++ LEPC        CA A+   RI+R++Y   N   GG+ +  +     + +H 
Sbjct: 360 TGYDIFLLLEPCTIRDMFPRCAMALVHQRIKRIFYAFPNTTAGGLGSVHRLQGEKSLNHH 419

Query: 126 PEIYPGISEQRSRQIIQ 142
             ++  +    + + + 
Sbjct: 420 YAVFRVLLPDDALRQMT 436


>gi|332291606|ref|YP_004430215.1| CMP/dCMP deaminase zinc-binding protein [Krokinobacter diaphorus
           4H-3-7-5]
 gi|332169692|gb|AEE18947.1| CMP/dCMP deaminase zinc-binding protein [Krokinobacter diaphorus
           4H-3-7-5]
          Length = 142

 Score = 65.7 bits (160), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 28/111 (25%), Positives = 43/111 (38%), Gaps = 15/111 (13%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRN--------RELKDVT-- 51
           K    ++  A E  + +    +  VGA+ V +  IIS   N           + ++ T  
Sbjct: 7   KYDIAYLRMAREWGKLSYCNRKQ-VGAIIVKDKMIISDGYNGTPTGFENVCEDDENNTKW 65

Query: 52  --AHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
              HAE  AI                LY+TL PC  C+  +  A I+R+ Y
Sbjct: 66  YVLHAEANAILKVASSTQSCH--GATLYITLSPCKDCSKLVHQAGIKRVVY 114


>gi|312374791|gb|EFR22274.1| hypothetical protein AND_15517 [Anopheles darlingi]
          Length = 193

 Score = 65.7 bits (160), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 28/119 (23%), Positives = 42/119 (35%), Gaps = 31/119 (26%)

Query: 5   NVFMSCALEEAQNAALRNEIP---VGAVAVLNNK-IISRAGNR------------NRELK 48
             FM+ A   A+ +      P   VGA  V  +K ++    N             ++   
Sbjct: 26  EYFMAMAFLAAKRSKD----PSTQVGACIVNEDKRVVGLGYNGFPTGCNDDEFPWSKTSS 81

Query: 49  DVT-------AHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
           D          HAE+ AI       +   +    +YV L PC  CA  I  + IR + Y
Sbjct: 82  DPLETKYLYVCHAEVNAILN----KNSADVKNCTMYVALFPCNECAKIIIQSAIREVVY 136


>gi|300775315|ref|ZP_07085177.1| competence protein ComEB [Chryseobacterium gleum ATCC 35910]
 gi|300506055|gb|EFK37191.1| competence protein ComEB [Chryseobacterium gleum ATCC 35910]
          Length = 140

 Score = 65.7 bits (160), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 38/144 (26%), Positives = 53/144 (36%), Gaps = 28/144 (19%)

Query: 1   MKK-GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRN--------RELKDVT 51
           M K    ++  A E A+ +  + +  VGA+ V +  IIS   N           + +  T
Sbjct: 1   MNKFDKAYLKMAQEWAKLSYCKRKQ-VGALIVKDRMIISDGYNGTPSGFENCCEDEEGKT 59

Query: 52  A----HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY--GASNP 105
                HAE  AI                LY+TL PC  C+  I  A I RL Y    S+ 
Sbjct: 60  HWYVLHAEANAILKLAASTQSA--KGATLYLTLSPCKECSKLILQAGITRLVYINEYSDD 117

Query: 106 KGGGIENGTQFYTLATCHHSPEIY 129
                  G  F      +H+ EI 
Sbjct: 118 D------GISFLR----NHNIEIE 131


>gi|323332396|gb|EGA73805.1| Tad3p [Saccharomyces cerevisiae AWRI796]
          Length = 163

 Score = 65.7 bits (160), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 26/125 (20%), Positives = 53/125 (42%), Gaps = 19/125 (15%)

Query: 28  AVAV----LNNKIISR-AGNRNRELKDVTAHAEILAIRMGCRIL--------SQEILPEV 74
           +V V      +K+++    N    L     H+ ++ IR     L        +  +  + 
Sbjct: 29  SVFVDPSRKKDKVVAEDGRNCENSL--PIDHSVMVGIRAVGERLREGVDEDANSYLCLDY 86

Query: 75  DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI----ENGTQFYTLATCHHSPEIYP 130
           D+Y+T EPC+MC+ A+  +R+RR+ +     + G +     +G         + + E + 
Sbjct: 87  DVYLTHEPCSMCSMALIHSRVRRVVFLTEMQRTGSLKLTSGDGYCMNDNKQLNSTYEAFQ 146

Query: 131 GISEQ 135
            I E+
Sbjct: 147 WIGEE 151


>gi|240143386|ref|ZP_04741987.1| putative deoxycytidylate deaminase [Roseburia intestinalis L1-82]
 gi|257204654|gb|EEV02939.1| putative deoxycytidylate deaminase [Roseburia intestinalis L1-82]
 gi|291537131|emb|CBL10243.1| Deoxycytidylate deaminase [Roseburia intestinalis M50/1]
 gi|291540369|emb|CBL13480.1| Deoxycytidylate deaminase [Roseburia intestinalis XB6B4]
          Length = 161

 Score = 65.7 bits (160), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 32/122 (26%), Positives = 43/122 (35%), Gaps = 30/122 (24%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNN-KIISRAGNRN-----------R 45
           +     FM  A+     +      P   VGA  V  + KI+S   N              
Sbjct: 9   ISWDEYFMGVAVLSGMRSKD----PNTQVGACIVSEDHKILSMGYNGFPTGCSDDEFPWE 64

Query: 46  ELKDV-------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98
              +        T H+E+ AI           L    +YVTL PC  CA AI  + IRR+
Sbjct: 65  REGEPLENKYFYTTHSELNAILN----YRGGSLEGATIYVTLFPCNECAKAIIQSGIRRI 120

Query: 99  YY 100
            Y
Sbjct: 121 VY 122


>gi|189424806|ref|YP_001951983.1| CMP/dCMP deaminase zinc-binding [Geobacter lovleyi SZ]
 gi|189421065|gb|ACD95463.1| CMP/dCMP deaminase zinc-binding [Geobacter lovleyi SZ]
          Length = 156

 Score = 65.7 bits (160), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 24/99 (24%), Positives = 34/99 (34%), Gaps = 25/99 (25%)

Query: 26  VGAVAVLNNKIISRAGN--------------RNRELKDVTA---------HAEILAIRMG 62
           VGA+ V +  I++   N                  LK  +          HAE  AI   
Sbjct: 28  VGALLVKDRNILATGYNGTPSGIRHCEETGCLRERLKVPSGERHELCRGLHAEQNAIIQA 87

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
            R      +    LY T  PC +C   +  A I+R+ Y 
Sbjct: 88  ARHGVN--IDGSTLYCTTMPCIICTKMLINAGIKRIVYA 124


>gi|169836056|ref|ZP_02869244.1| riboflavin biosynthesis protein RibD [candidate division TM7
          single-cell isolate TM7a]
          Length = 66

 Score = 65.7 bits (160), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 21/68 (30%), Positives = 31/68 (45%), Gaps = 12/68 (17%)

Query: 26 VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC-- 83
          VGAV V + K+I    ++         HAE+ A+    +  + + L    +YVTLEPC  
Sbjct: 2  VGAVVVQDGKVIGTGYHKYFGG----PHAEVYALEEAAQ--NSKDLSNATIYVTLEPCSH 55

Query: 84 ----TMCA 87
                CA
Sbjct: 56 YGKTPPCA 63


>gi|149182757|ref|ZP_01861221.1| ComEB [Bacillus sp. SG-1]
 gi|148849523|gb|EDL63709.1| ComEB [Bacillus sp. SG-1]
          Length = 175

 Score = 65.7 bits (160), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 24/91 (26%), Positives = 36/91 (39%), Gaps = 17/91 (18%)

Query: 26  VGAVAVLNNKIISRAGNRNRELK-----------D----VTAHAEILAIRMGCRILSQEI 70
           VGA  V + +II+   N +               D     T HAE+ AI    +      
Sbjct: 18  VGATIVRDKRIIAGGYNGSIAGGVHCIDEGCYVIDNHCVRTIHAEMNAIIQCAKFGVPT- 76

Query: 71  LPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
               ++YVT  PC  C   +  A I+++YY 
Sbjct: 77  -AGAEIYVTHFPCLQCCKGLIQAGIKKVYYA 106


>gi|156841735|ref|XP_001644239.1| hypothetical protein Kpol_1051p30 [Vanderwaltozyma polyspora DSM
           70294]
 gi|156114877|gb|EDO16381.1| hypothetical protein Kpol_1051p30 [Vanderwaltozyma polyspora DSM
           70294]
          Length = 317

 Score = 65.7 bits (160), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 32/152 (21%), Positives = 44/152 (28%), Gaps = 39/152 (25%)

Query: 4   GNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGN---------------RNRE 46
              FM  A   A  +    R    VG V V + ++I+   N               R  +
Sbjct: 169 DTYFMKLATLAASRSNCMKRR---VGCVIVRDRRVIATGYNGTPRHLTNCFNGGCPRCND 225

Query: 47  LKDVT------AHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
               T       HAE  A+    R     I     LY    PC  C+  I    I+ + Y
Sbjct: 226 GNSHTLHTCLCLHAEENALLEAGR---DRIGQNAILYCDTCPCLTCSVKIVQTGIKEVVY 282

Query: 101 GAS---NP------KGGGIE-NGTQFYTLATC 122
             S   +       K GG+      F      
Sbjct: 283 SQSYRMDEDSFKVLKEGGVNIRQFNFLQDPRI 314


>gi|34419354|ref|NP_899367.1| dCMP deaminase [Vibrio phage KVP40]
 gi|34333035|gb|AAQ64190.1| dCMP deaminase [Vibrio phage KVP40]
          Length = 150

 Score = 65.7 bits (160), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 30/95 (31%), Positives = 36/95 (37%), Gaps = 21/95 (22%)

Query: 26  VGAVAVLNNKIISRAGN----------RNRELKDVTA---------HAEILAIRMGCRIL 66
           VGAV V N++IIS   N             +  D+T          HAE  AI    R  
Sbjct: 31  VGAVIVKNDRIISHGYNGTPSGMLHCKDTADFGDLTHRQWSEIHEIHAEQNAICYAARAG 90

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
                    +YVT  PC  CA  I  A I+ L  G
Sbjct: 91  IST--EGATMYVTASPCHNCAKLIVAAGIKILIVG 123


>gi|225028456|ref|ZP_03717648.1| hypothetical protein EUBHAL_02730 [Eubacterium hallii DSM 3353]
 gi|224954206|gb|EEG35415.1| hypothetical protein EUBHAL_02730 [Eubacterium hallii DSM 3353]
          Length = 159

 Score = 65.7 bits (160), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 33/116 (28%), Positives = 41/116 (35%), Gaps = 24/116 (20%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNR----NRELKDV-------- 50
              FM  AL  AQ +   N   VG+  V   NKI+S   N       + +          
Sbjct: 10  DAYFMGVALLSAQRSKD-NNTQVGSCIVNPHNKILSMGYNGMPTGCNDDRMPWERKGTPL 68

Query: 51  ------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
                   HAE+ AI       S   L    +Y TL PC  C  AI  A I  + Y
Sbjct: 69  DTKYLYVCHAELNAILN----YSGGSLRGARIYTTLFPCNECTKAIIQAGITEVIY 120


>gi|260777313|ref|ZP_05886207.1| putative deoxycytidylate deaminase [Vibrio coralliilyticus ATCC
           BAA-450]
 gi|260606979|gb|EEX33253.1| putative deoxycytidylate deaminase [Vibrio coralliilyticus ATCC
           BAA-450]
          Length = 150

 Score = 65.7 bits (160), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 25/86 (29%), Positives = 31/86 (36%), Gaps = 18/86 (20%)

Query: 26  VGAVAVLNNKIISRAGN-------------RNRELKDVTAHAEILAIRMGCRILSQEILP 72
           VGAV    N+I+S   N                     T HAE  AI    R      L 
Sbjct: 27  VGAVITKQNRIVSVGFNGYPHGISDSAMTDEREMKYLKTLHAEENAILFAKR-----DLD 81

Query: 73  EVDLYVTLEPCTMCAAAISLARIRRL 98
             +++VT  PC  CAA I    I  +
Sbjct: 82  GCEIWVTHFPCPNCAAKIIQTGISAV 107


>gi|227873068|ref|ZP_03991362.1| dCMP deaminase [Oribacterium sinus F0268]
 gi|227841049|gb|EEJ51385.1| dCMP deaminase [Oribacterium sinus F0268]
          Length = 173

 Score = 65.7 bits (160), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 32/125 (25%), Positives = 43/125 (34%), Gaps = 33/125 (26%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNN-KIISRAGN-------------- 42
           +     FM      A  +      P   VGA  V  + KI+S   N              
Sbjct: 18  ISWDEYFMGICTLSAHRSKD----PSTQVGACIVSPDHKILSMGYNGFPKGCSDDIFPWA 73

Query: 43  RNRELKDV-------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARI 95
           + +  +D          HAE+ AI           L    +YVTL PC  CA AI  + I
Sbjct: 74  KMKAEQDPYNAKYFYVTHAELNAILN----YRGGSLEGATIYVTLFPCNECAKAIIQSGI 129

Query: 96  RRLYY 100
           + L Y
Sbjct: 130 KTLVY 134


>gi|327461076|gb|EGF07409.1| cytidine and deoxycytidylate deaminase [Streptococcus sanguinis
           SK1057]
          Length = 155

 Score = 65.7 bits (160), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 31/117 (26%), Positives = 41/117 (35%), Gaps = 29/117 (24%)

Query: 4   GNVFMSCALEEA-----QNAALRNEIPVGAVAVLNNKIISRAGNRNRELK---------- 48
              F + AL  A     + A       VGAV V +NK+IS   N +              
Sbjct: 9   DQYFAAQALLIANRSTCKRAK------VGAVLVKDNKVISTGYNGSVSGTEHCIDHECLV 62

Query: 49  -DV----TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
            D     T HAE+ AI  G      +       YVT  PC  C   +     +R+ Y
Sbjct: 63  IDGHCVRTLHAEVNAILQGAERGVPK---GFTAYVTHFPCLNCTKQLLQVGCKRVVY 116


>gi|146296225|ref|YP_001179996.1| CMP/dCMP deaminase, zinc-binding [Caldicellulosiruptor
           saccharolyticus DSM 8903]
 gi|145409801|gb|ABP66805.1| CMP/dCMP deaminase, zinc-binding protein [Caldicellulosiruptor
           saccharolyticus DSM 8903]
          Length = 151

 Score = 65.7 bits (160), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 22/98 (22%), Positives = 37/98 (37%), Gaps = 25/98 (25%)

Query: 26  VGAVAVLNNKIISRAGN--------------RNRELKDVTA---------HAEILAIRMG 62
           VGA+ V + +I++   N                 +L   +          HAE  AI   
Sbjct: 27  VGALIVKDKRILATGYNGAPSNLPHCEEVGCLREKLNVPSGQRHELCRGLHAEQNAIIQA 86

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
            ++     +    +Y T  PC +CA  I  A I+++ Y
Sbjct: 87  AKMGVN--IDGSVIYTTTYPCVICAKMIVNAGIKKVIY 122


>gi|225378688|ref|ZP_03755909.1| hypothetical protein ROSEINA2194_04358 [Roseburia inulinivorans DSM
           16841]
 gi|225209525|gb|EEG91879.1| hypothetical protein ROSEINA2194_04358 [Roseburia inulinivorans DSM
           16841]
          Length = 161

 Score = 65.7 bits (160), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 31/122 (25%), Positives = 43/122 (35%), Gaps = 30/122 (24%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAV-LNNKIISRAGNRNRELKD------- 49
           +     FM  A+     +      P   VGA  V  ++KI+S   N              
Sbjct: 9   ISWDEYFMGVAMLTGMRSKD----PNTQVGACIVSADHKILSMGYNGLPTGCSDDEFPWG 64

Query: 50  -----------VTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98
                       T H+E+ AI           L    +YV+L PC  CA AI  A I+R+
Sbjct: 65  REGAPLENKYLFTTHSELNAILN----YRGGSLEGSTIYVSLFPCNECAKAIIQAGIKRI 120

Query: 99  YY 100
            Y
Sbjct: 121 VY 122


>gi|326536349|ref|YP_004300790.1| Cd dCMP deaminase [Acinetobacter phage 133]
 gi|299483430|gb|ADJ19524.1| Cd dCMP deaminase [Acinetobacter phage 133]
          Length = 185

 Score = 65.7 bits (160), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 37/145 (25%), Positives = 52/145 (35%), Gaps = 52/145 (35%)

Query: 1   MKKGNVFMSCAL---EEAQNAALRNEIPVGAVAVLNNKIISRAGNR-------------- 43
           MK  + FM  A    +E++  + +    VGAV   N +IIS   N               
Sbjct: 1   MKS-STFMQIAYLVSQESKCVSWK----VGAVIAKNGRIISTGYNGSPAGGVNCCDHASE 55

Query: 44  ---NRELKDV---------------------TAH----AEILAIRMGCRILSQEILPEVD 75
                   D                      +AH    AE+ AI    R  +   +    
Sbjct: 56  QNWTTGQYDPAPPHINRVTLKTECRDLHSKWSAHNEIHAELNAILYAAR--NGTAIEGAT 113

Query: 76  LYVTLEPCTMCAAAISLARIRRLYY 100
           LYVTL PC  CA AI+ + I++L Y
Sbjct: 114 LYVTLSPCADCAKAIAQSGIKQLVY 138


>gi|239831592|ref|ZP_04679921.1| riboflavin biosynthesis protein RibD [Ochrobactrum intermedium LMG
           3301]
 gi|239823859|gb|EEQ95427.1| riboflavin biosynthesis protein RibD [Ochrobactrum intermedium LMG
           3301]
          Length = 375

 Score = 65.7 bits (160), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 31/146 (21%), Positives = 45/146 (30%), Gaps = 21/146 (14%)

Query: 2   KKGNVFMSCALEEAQ--NAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
                FM   +  A+           VG + V +  I+ R             HAE  A+
Sbjct: 15  SDDVRFMEATIRYARRHKGLTGTNPSVGTIIVKDGVIVGRG----VTALGGRPHAEPQAL 70

Query: 60  RMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENG 113
                            YVTLEPC        CA  +  A + R+   A++P       G
Sbjct: 71  AEAGDAA-----RGATAYVTLEPCAHHGRTPPCAETLVRAGVARVVAAATDPDERVSGKG 125

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQ 139
                 A      E+ PGI   ++  
Sbjct: 126 FAILREAG----IEVVPGILADQAAD 147


>gi|300741401|ref|ZP_07071422.1| riboflavin biosynthesis protein RibD [Rothia dentocariosa M567]
 gi|300380586|gb|EFJ77148.1| riboflavin biosynthesis protein RibD [Rothia dentocariosa M567]
          Length = 374

 Score = 65.7 bits (160), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 33/161 (20%), Positives = 58/161 (36%), Gaps = 25/161 (15%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAI 59
           M      MS A+E A+         VGAV      +++    +R       T HAE    
Sbjct: 1   MTDDRA-MSLAIEAARQGIRGANPLVGAVITNSAGQVLHIGWHR----GAGTPHAEAD-- 53

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENG 113
            +     +   + +  +YV+LEPC        C+ AI  A I +++Y   +        G
Sbjct: 54  ALAQARAAGTDMSDAKMYVSLEPCNHTGKTGPCSHAIKEAGISQVFYAYPDRSAQASG-G 112

Query: 114 TQFYTLATCHHSPEIYPGISE--QRSRQIIQDFF---KERR 149
            ++           +   + E    S  + + +F    E+R
Sbjct: 113 AEYLRSHGI-----VTTYMREFADDSYALNERWFISVAEKR 148


>gi|156846788|ref|XP_001646280.1| hypothetical protein Kpol_1032p14 [Vanderwaltozyma polyspora DSM
           70294]
 gi|156116955|gb|EDO18422.1| hypothetical protein Kpol_1032p14 [Vanderwaltozyma polyspora DSM
           70294]
          Length = 612

 Score = 65.7 bits (160), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 38/154 (24%), Positives = 59/154 (38%), Gaps = 26/154 (16%)

Query: 1   MKKGNVFMSCALEEAQN------AALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHA 54
           ++    +M  ALEEA+       A       VGA+     +++S   +R  E      HA
Sbjct: 460 LQSNKKYMELALEEAKKCPPTKTAFS-----VGAILANGTEVLSTGYSRELEGN---THA 511

Query: 55  EILAIRMGCRILSQEILP-EVDLYVTLEPCT-------MCAAAISLA--RIRRLYYGASN 104
           E  A+      + +  +P    LY T+EPC+        C   I  A  RI  ++ G   
Sbjct: 512 EQCALEKYFTKIGKREVPLGSVLYTTMEPCSYRLSGNKPCLERILDAKGRIGSVFVGVLE 571

Query: 105 PKGGGIENGTQFYTLATCHHSPEIYPGISEQRSR 138
           P    ++N   F TL +        PG  E+   
Sbjct: 572 PDT-FVKNNVSFDTLTSNGIDYIQIPGY-EEECI 603


>gi|91773922|ref|YP_566614.1| CMP/dCMP deaminase, zinc-binding [Methanococcoides burtonii DSM
           6242]
 gi|91712937|gb|ABE52864.1| dCMP deaminase [Methanococcoides burtonii DSM 6242]
          Length = 151

 Score = 65.7 bits (160), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 29/127 (22%), Positives = 44/127 (34%), Gaps = 26/127 (20%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGN----------------RNREL 47
              F+  A   ++ +       VGAV V N +I+S   N                +   +
Sbjct: 8   DEYFLEIASVVSKRSTCLRNK-VGAVIVRNKRILSTGYNGAPSNMEHCLEIGCIRQQNNI 66

Query: 48  KDVTAH-------AEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
              T H       AE  AI      L    +    +Y T +PC +CA  I  + I ++ Y
Sbjct: 67  ASGTRHEKCRAVHAEQNAIIQAA--LHGVSIGGATVYCTHQPCILCAKMIINSNITKVVY 124

Query: 101 GASNPKG 107
             S P  
Sbjct: 125 STSYPDT 131


>gi|302559850|ref|ZP_07312192.1| riboflavin/cytosine deaminase [Streptomyces griseoflavus Tu4000]
 gi|302477468|gb|EFL40561.1| riboflavin/cytosine deaminase [Streptomyces griseoflavus Tu4000]
          Length = 363

 Score = 65.7 bits (160), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 27/100 (27%), Positives = 38/100 (38%), Gaps = 15/100 (15%)

Query: 26  VGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC- 83
           VGAV V  +   ++R  +R  E  D   HAE  A+       +   L    +Y +LEPC 
Sbjct: 254 VGAVVVAADGTELARGHSR--EGGDPVVHAEEAAL--AKADPTDPRLATATVYSSLEPCA 309

Query: 84  ------TMCAAAISLARIRRLYYGASNPKG---GGIENGT 114
                   C   I  A +RR+      P     G   +G 
Sbjct: 310 RRASRPASCVRLILDAGVRRVVTAWREPDTFVEGADGSGV 349


>gi|308161963|gb|EFO64392.1| Hypothetical protein GLP15_944 [Giardia lamblia P15]
          Length = 306

 Score = 65.3 bits (159), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 18/85 (21%), Positives = 33/85 (38%), Gaps = 4/85 (4%)

Query: 49  DVTAHAEILAIR----MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASN 104
           D+  H   +AI              +L   D++   EPC  C+  +  AR++R++Y    
Sbjct: 199 DMLRHPVHIAIEEAMKQAAENDKAYLLTGYDVFALEEPCIFCSMCLLHARVKRVFYSTFM 258

Query: 105 PKGGGIENGTQFYTLATCHHSPEIY 129
              GG+       +L   +H   + 
Sbjct: 259 RHNGGLNETLMVPSLPGVNHRFPVV 283


>gi|255732273|ref|XP_002551060.1| DRAP deaminase [Candida tropicalis MYA-3404]
 gi|240131346|gb|EER30906.1| DRAP deaminase [Candida tropicalis MYA-3404]
          Length = 590

 Score = 65.3 bits (159), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 28/112 (25%), Positives = 44/112 (39%), Gaps = 14/112 (12%)

Query: 6   VFMSCALEEAQN-AALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM--G 62
            FM  A+E+A+     + +  VG V V N K+IS   +R         HAE  A+     
Sbjct: 438 KFMEMAIEQAEKCGETQTQFNVGCVLVNNGKVISTGHSRELPGN---THAEQCALEKYFA 494

Query: 63  CRILSQEILPEVDLYVTLEPC-------TMCAAAISLA-RIRRLYYGASNPK 106
                +E+    +++ T+EPC         C   I     I+  + G   P 
Sbjct: 495 EHDGVKEVPEGTEIFTTMEPCSLRLSGNLPCVDRILETKGIKTCFVGVLEPD 546


>gi|171691546|ref|XP_001910698.1| hypothetical protein [Podospora anserina S mat+]
 gi|170945721|emb|CAP71834.1| unnamed protein product [Podospora anserina S mat+]
          Length = 233

 Score = 65.3 bits (159), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 27/95 (28%), Positives = 34/95 (35%), Gaps = 17/95 (17%)

Query: 26  VGAVAV------LNNKIISRAGNRNRELKDVTAHAEILAIRM--------GCRILSQEIL 71
            G V V          +I    N N  + + T H EI AI             +   E L
Sbjct: 66  FGTVIVNHTSANPQGTLICTGSNGNSRIGNPTLHGEIAAINNCSSLFVSSAYNMTPAESL 125

Query: 72  P---EVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
               ++ LY   E C MCAAA+  A  R   YG  
Sbjct: 126 AAFKDLTLYTNAESCLMCAAAVRWAGFREYVYGVP 160


>gi|115725150|ref|XP_781375.2| PREDICTED: similar to MGC81193 protein [Strongylocentrotus
           purpuratus]
 gi|115958553|ref|XP_001190940.1| PREDICTED: similar to MGC81193 protein [Strongylocentrotus
           purpuratus]
          Length = 205

 Score = 65.3 bits (159), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 30/119 (25%), Positives = 41/119 (34%), Gaps = 31/119 (26%)

Query: 5   NVFMSCALEEAQNAALRNEIP---VGAVAVLNNK-IISRAGN-RNRELKD---------- 49
           + FMS A   AQ +      P   VGA  V   K I+    N       D          
Sbjct: 69  DYFMSVAFLSAQRSKD----PSSQVGACIVNEEKKIVGIGYNGMPNGCNDDVLPWSRDSE 124

Query: 50  -------V-TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
                      HAE+ AI       +   +    +YV L PC  CA  I  + IR++ +
Sbjct: 125 DWLETKYPYVCHAELNAIMN----KNSADVKGCTMYVALFPCNECAKVIIQSGIRKIVF 179


>gi|323435986|ref|ZP_01049493.2| dCMP deaminase [Dokdonia donghaensis MED134]
 gi|321496301|gb|EAQ39465.2| dCMP deaminase [Dokdonia donghaensis MED134]
          Length = 142

 Score = 65.3 bits (159), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 28/111 (25%), Positives = 43/111 (38%), Gaps = 15/111 (13%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRN--------RELKDVT-- 51
           K    ++  A E  + +    +  VGA+ V +  IIS   N           + ++ T  
Sbjct: 7   KYDIAYLRMAREWGKLSYCNRKQ-VGAIIVKDKMIISDGYNGTPTGFENVCEDEENNTKW 65

Query: 52  --AHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
              HAE  AI                LY+TL PC  C+  +  A I+R+ Y
Sbjct: 66  YVLHAEANAILKVASSTQSCH--GATLYITLSPCKDCSKLVHQAGIKRVVY 114


>gi|225573949|ref|ZP_03782594.1| hypothetical protein RUMHYD_02043 [Blautia hydrogenotrophica DSM
           10507]
 gi|225038808|gb|EEG49054.1| hypothetical protein RUMHYD_02043 [Blautia hydrogenotrophica DSM
           10507]
          Length = 164

 Score = 65.3 bits (159), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 36/123 (29%), Positives = 48/123 (39%), Gaps = 30/123 (24%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVL-NNKIISRAGN-------------R 43
           +     FM  A    Q A +R++ P   VGA  V  +NKI+S   N              
Sbjct: 12  ITWDEYFMGVA----QLAGMRSKDPSSQVGACIVSEDNKILSMGYNGFPIGCSDDDFPWA 67

Query: 44  NRELKDVT-----AHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98
               +  T      H+E+ AI           L    LYVTL PC  CA AI  + I+ +
Sbjct: 68  REGEELETKYLYVTHSELNAILN----YRGGSLEGAKLYVTLFPCNECAKAIIQSGIKTI 123

Query: 99  YYG 101
            YG
Sbjct: 124 VYG 126


>gi|329938811|ref|ZP_08288207.1| riboflavin/cytosine deaminase [Streptomyces griseoaurantiacus M045]
 gi|329302302|gb|EGG46194.1| riboflavin/cytosine deaminase [Streptomyces griseoaurantiacus M045]
          Length = 379

 Score = 65.3 bits (159), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 35/141 (24%), Positives = 47/141 (33%), Gaps = 26/141 (18%)

Query: 4   GNVFMSCALEEAQN------AALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEI 56
              ++  A + A+       A       VGAV V  +   ++R  +R  E  D   HAE 
Sbjct: 232 DRRWLGLACDLAERCPPSETAFS-----VGAVVVAADGTELARGFSR--EGGDPAVHAEE 284

Query: 57  LAIRMGCRILSQEILPEVDLYVTLEPC-------TMCAAAISLARIRRLYYGASNPKG-- 107
            A+           L    +Y +LEPC         CA  I  A  RR+      P    
Sbjct: 285 AAL--AKVAPGDARLAGATVYSSLEPCARRASRPVPCARLILAAGARRVVTAWREPDTFV 342

Query: 108 -GGIENGTQFYTLATCHHSPE 127
            G    G      A   H PE
Sbjct: 343 PGADGTGVLTAGGAHVVHLPE 363


>gi|325126599|gb|ADY85929.1| RibD protein [Lactobacillus delbrueckii subsp. bulgaricus 2038]
          Length = 107

 Score = 65.3 bits (159), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 21/78 (26%), Positives = 32/78 (41%), Gaps = 10/78 (12%)

Query: 69  EILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
           E L    +YVTLEPC        C   I  + I+R+  GA++P       G      A  
Sbjct: 4   EQLSNSTIYVTLEPCCHYGKQPPCTQLIIDSGIKRVVVGATDPHSLVTGKGIAALRQAGL 63

Query: 123 HHSPEIYPGISEQRSRQI 140
               E+  G+  + + Q+
Sbjct: 64  ----EVSTGLLAKEASQL 77


>gi|153816406|ref|ZP_01969074.1| hypothetical protein RUMTOR_02659 [Ruminococcus torques ATCC 27756]
 gi|317502465|ref|ZP_07960628.1| dCMP deaminase [Lachnospiraceae bacterium 8_1_57FAA]
 gi|331089291|ref|ZP_08338193.1| hypothetical protein HMPREF1025_01776 [Lachnospiraceae bacterium
           3_1_46FAA]
 gi|145846241|gb|EDK23159.1| hypothetical protein RUMTOR_02659 [Ruminococcus torques ATCC 27756]
 gi|316896150|gb|EFV18258.1| dCMP deaminase [Lachnospiraceae bacterium 8_1_57FAA]
 gi|330405843|gb|EGG85372.1| hypothetical protein HMPREF1025_01776 [Lachnospiraceae bacterium
           3_1_46FAA]
          Length = 187

 Score = 65.3 bits (159), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 37/160 (23%), Positives = 54/160 (33%), Gaps = 44/160 (27%)

Query: 4   GNVFMSCALEEAQNAALRNEIP---VGAVAVL-NNKIISRAGNR------------NREL 47
              FM  A+     +      P   VG   V  +NKI+S   N              R+ 
Sbjct: 37  DEYFMGVAMLSGMRSKD----PNTQVGCCIVSQDNKILSMGYNGFPLGCSDDEFPWVRDG 92

Query: 48  KDV-------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
           +D        + H+E+ AI       S   L    LYV+L PC  CA AI  A I+ + Y
Sbjct: 93  EDPLETKYVYSTHSELNAILN----YSGGSLAGAKLYVSLFPCNECAKAIIQAGIKEVIY 148

Query: 101 GASNPKGGGIEN-----------GTQFYTLATCHHSPEIY 129
                K     +           G +++     +   EI 
Sbjct: 149 DC--DKYADTPSVIASKRMMDAAGVRYHQYHRTNRKIEIE 186


>gi|295132300|ref|YP_003582976.1| cytidine/deoxycytidylate deaminase family protein [Zunongwangia
           profunda SM-A87]
 gi|294980315|gb|ADF50780.1| cytidine/deoxycytidylate deaminase family protein [Zunongwangia
           profunda SM-A87]
          Length = 143

 Score = 65.3 bits (159), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 32/134 (23%), Positives = 47/134 (35%), Gaps = 29/134 (21%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTA-------- 52
           +K    ++  A E ++ +  + +  VGAV V +  IIS   N        +         
Sbjct: 7   LKYDKAYLRIAREWSKLSHCKRKQ-VGAVIVKDRMIISDGYNGT-----PSGFENFCEDE 60

Query: 53  ---------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
                    HAE  AI                LY+T+ PC  C+  I  A I RL Y   
Sbjct: 61  EGYTKWYVLHAEANAILKVAASTQS--CQGATLYITMSPCKECSKLIHQAGITRLVY-CV 117

Query: 104 NPKGGGIENGTQFY 117
           + K     +G  F 
Sbjct: 118 DYKD---NSGLDFL 128


>gi|299115986|emb|CBN75987.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 284

 Score = 65.3 bits (159), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 30/120 (25%), Positives = 41/120 (34%), Gaps = 31/120 (25%)

Query: 4   GNVFMSCALEEAQNAALRNEIP---VGAVAVLNNK-IISRAGN---RNRELKDVTA---- 52
            + FMS A   A  +      P   VGA  V  +K I+    N         D+      
Sbjct: 129 DDYFMSVAFLSAMRSKD----PSTQVGACIVNEDKRIVGIGYNGFPMGCSDDDLPWARQA 184

Query: 53  ------------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
                       HAE+ AI       +   +    +YV L PC  CA  I  + IR + Y
Sbjct: 185 DDELDTKYPYVCHAEMNAILN----KNSADVKGCLIYVALFPCNECAKLIIQSGIREVVY 240


>gi|291548625|emb|CBL24887.1| Deoxycytidylate deaminase [Ruminococcus torques L2-14]
          Length = 162

 Score = 65.3 bits (159), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 34/126 (26%), Positives = 46/126 (36%), Gaps = 31/126 (24%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVL-NNKIISRAGNR------------N 44
           +     FM  A+     +      P   VG   V  +NKI+S   N              
Sbjct: 9   LSWDEYFMGVAMLSGMRSKD----PNTQVGCCIVSQDNKILSMGYNGLPMGCSDDEFPWA 64

Query: 45  RELKDV-------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRR 97
           RE +D        T H+E+ AI       +   L    LYV+L PC  CA AI  A I+ 
Sbjct: 65  REGEDPLETKYVYTTHSELNAILN----YNGGSLAGAKLYVSLFPCNECAKAIIQAGIKE 120

Query: 98  LYYGAS 103
           + Y   
Sbjct: 121 VIYDCD 126


>gi|160901692|ref|YP_001567273.1| CMP/dCMP deaminase zinc-binding [Petrotoga mobilis SJ95]
 gi|160359336|gb|ABX30950.1| CMP/dCMP deaminase zinc-binding [Petrotoga mobilis SJ95]
          Length = 169

 Score = 65.3 bits (159), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 29/150 (19%), Positives = 54/150 (36%), Gaps = 32/150 (21%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRN---RELKDVTA-------- 52
              FM  A   ++ +       VGAV V   +I++   N+        D           
Sbjct: 29  DKYFMEVADLVSKRSTCL-HRKVGAVIVKEKRILATGYNQPPSGFPHCDDIGCIRDDLGI 87

Query: 53  ------------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
                       HAE  A+    +           +Y+T +PC++CA  +  A I+ +YY
Sbjct: 88  KSGENQEICYGLHAEQNALMQAAKFGISTD--NASIYITHQPCSVCARLVINAGIKNVYY 145

Query: 101 GASNPKGGGIENGTQFYTLATCHHSPEIYP 130
                + G  ++ T+ +   TC+   ++  
Sbjct: 146 -----REGYPDSLTKLFFD-TCNIQTKVIE 169


>gi|323499282|ref|ZP_08104259.1| putative deoxycytidylate deaminase [Vibrio sinaloensis DSM 21326]
 gi|323315670|gb|EGA68704.1| putative deoxycytidylate deaminase [Vibrio sinaloensis DSM 21326]
          Length = 150

 Score = 65.3 bits (159), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 25/86 (29%), Positives = 31/86 (36%), Gaps = 18/86 (20%)

Query: 26  VGAVAVLNNKIISRAGN-------------RNRELKDVTAHAEILAIRMGCRILSQEILP 72
           VGAV    N+I+S   N                     T HAE  AI    R      L 
Sbjct: 27  VGAVITKQNRIVSVGFNGYPHGISDSAMTDDREMKYLKTLHAEENAILFAKR-----DLD 81

Query: 73  EVDLYVTLEPCTMCAAAISLARIRRL 98
             +++VT  PC  CAA I    I  +
Sbjct: 82  GCEIWVTHFPCPNCAAKIIQTGISAV 107


>gi|323493550|ref|ZP_08098672.1| putative deoxycytidylate deaminase [Vibrio brasiliensis LMG 20546]
 gi|323312373|gb|EGA65515.1| putative deoxycytidylate deaminase [Vibrio brasiliensis LMG 20546]
          Length = 149

 Score = 65.3 bits (159), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 25/86 (29%), Positives = 31/86 (36%), Gaps = 18/86 (20%)

Query: 26  VGAVAVLNNKIISRAGN-------------RNRELKDVTAHAEILAIRMGCRILSQEILP 72
           VGAV    N+I+S   N                     T HAE  AI    R      L 
Sbjct: 27  VGAVITKQNRIVSVGFNGYPHGISDSAMTDDREMKYLKTLHAEENAILFAKR-----DLD 81

Query: 73  EVDLYVTLEPCTMCAAAISLARIRRL 98
             +++VT  PC  CAA I    I  +
Sbjct: 82  GCEIWVTHFPCPNCAAKIIQTGISAV 107


>gi|261250832|ref|ZP_05943406.1| putative deoxycytidylate deaminase [Vibrio orientalis CIP 102891]
 gi|260937705|gb|EEX93693.1| putative deoxycytidylate deaminase [Vibrio orientalis CIP 102891]
          Length = 149

 Score = 65.3 bits (159), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 25/86 (29%), Positives = 31/86 (36%), Gaps = 18/86 (20%)

Query: 26  VGAVAVLNNKIISRAGN-------------RNRELKDVTAHAEILAIRMGCRILSQEILP 72
           VGAV    N+I+S   N                     T HAE  AI    R      L 
Sbjct: 27  VGAVITKQNRIVSVGFNGYPHGISDSAMTDDREMKYLKTLHAEENAILFAKR-----DLD 81

Query: 73  EVDLYVTLEPCTMCAAAISLARIRRL 98
             +++VT  PC  CAA I    I  +
Sbjct: 82  GCEIWVTHFPCPNCAAKIIQTGISAV 107


>gi|255994428|ref|ZP_05427563.1| cytidine/deoxycytidylate deaminase family protein [Eubacterium
           saphenum ATCC 49989]
 gi|255993141|gb|EEU03230.1| cytidine/deoxycytidylate deaminase family protein [Eubacterium
           saphenum ATCC 49989]
          Length = 155

 Score = 65.3 bits (159), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 29/123 (23%), Positives = 44/123 (35%), Gaps = 27/123 (21%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGN---------------RNR 45
           +     FM  A E A          VGAV V N  I++   N                  
Sbjct: 8   ISWDEYFMRFA-ELAATRTTCLRRSVGAVIVKNKHILATGYNGAPKKVPHCKDLGGCLRE 66

Query: 46  ELKDVTA---------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIR 96
           +L   +          HAE  AI      +S + +    +Y+T +PC +C+  I  A I+
Sbjct: 67  KLNVPSGERHELCRALHAEQNAIIQCA--MSGQNIEGATIYITHQPCIICSKMIINAGIK 124

Query: 97  RLY 99
           R+ 
Sbjct: 125 RIV 127


>gi|328872021|gb|EGG20391.1| hypothetical protein DFA_07515 [Dictyostelium fasciculatum]
          Length = 330

 Score = 65.3 bits (159), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 19/56 (33%), Positives = 31/56 (55%)

Query: 49  DVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASN 104
           ++ AH EI+AI+    I    +     +Y T EPC+MCA+AI  +R + + +   N
Sbjct: 106 NMIAHGEIVAIQNCTEIHGISMYTNYSIYTTGEPCSMCASAILWSRFKTVVWSTYN 161


>gi|291385964|ref|XP_002709531.1| PREDICTED: dCMP deaminase [Oryctolagus cuniculus]
          Length = 178

 Score = 65.3 bits (159), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 32/116 (27%), Positives = 42/116 (36%), Gaps = 25/116 (21%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGN-RNRELKD------VTA---- 52
             FM+ A   AQ +   N   VGA  V   NKI+    N       D       TA    
Sbjct: 17  EYFMAVAFLSAQRSKDPNSQ-VGACIVNAENKIVGIGYNGMPNGCSDDLLPWRRTAENKL 75

Query: 53  --------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
                   HAE+ AI       +   +    +YV L PC  CA  I  A I+ + +
Sbjct: 76  DTKYPYVCHAELNAIMN----KNSADVKGCSMYVALFPCNECAKLIIQAGIKEVIF 127


>gi|157376789|ref|YP_001475389.1| CMP/dCMP deaminase, zinc-binding [Shewanella sediminis HAW-EB3]
 gi|157319163|gb|ABV38261.1| CMP/dCMP deaminase, zinc-binding [Shewanella sediminis HAW-EB3]
          Length = 145

 Score = 65.3 bits (159), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 26/86 (30%), Positives = 33/86 (38%), Gaps = 18/86 (20%)

Query: 26  VGAVAVLNNKIISRAGN-------------RNRELKDVTAHAEILAIRMGCRILSQEILP 72
           VGAV   NN+I+S   N                     T HAE  AI    R      L 
Sbjct: 27  VGAVITENNRIVSLGFNGYPHGISDSAETDNREMKLLKTLHAEENAILHAKR-----DLS 81

Query: 73  EVDLYVTLEPCTMCAAAISLARIRRL 98
             +++VT  PC  CAA I    +R +
Sbjct: 82  SCEIWVTHFPCPNCAAKIIQTGLRAV 107


>gi|295839977|ref|ZP_06826910.1| riboflavin biosynthesis protein RibD [Streptomyces sp. SPB74]
 gi|295827729|gb|EFG65559.1| riboflavin biosynthesis protein RibD [Streptomyces sp. SPB74]
          Length = 364

 Score = 65.3 bits (159), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 32/145 (22%), Positives = 50/145 (34%), Gaps = 33/145 (22%)

Query: 9   SCALEEAQNAA---LRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
             A+  A         N + VG V +  + ++     +          HAEI A+     
Sbjct: 11  REAIALAARGLGRTRHNPV-VGCVVLDASGEVAGSGWH----SGAAVPHAEIHALARA-- 63

Query: 65  ILSQEILPEV-DLYVTLEPCTM------CAAAISLARIRRLYYGASNP---KGGGIENGT 114
               E L  V    VTLEPC        C+ A+  A +RR+ Y  ++P     GG     
Sbjct: 64  ----EELSGVDTALVTLEPCDHTGRTGPCSRALIEAGVRRVVYAVADPTDQATGGAGT-- 117

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQ 139
                A      ++  G+ E  +  
Sbjct: 118 --LRAAGL----DVEHGLLEAEAAD 136


>gi|189485251|ref|YP_001956192.1| deoxycytidylate deaminase [uncultured Termite group 1 bacterium
           phylotype Rs-D17]
 gi|170287210|dbj|BAG13731.1| deoxycytidylate deaminase [uncultured Termite group 1 bacterium
           phylotype Rs-D17]
          Length = 163

 Score = 65.3 bits (159), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 27/120 (22%), Positives = 41/120 (34%), Gaps = 28/120 (23%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGN--------------------- 42
              FM  A   ++ +       VGAV V + +I++   N                     
Sbjct: 13  DEYFMKLAWLVSERSTCVRHH-VGAVIVRDKRILTTGYNGAATDMQDCISLGCLRNTLNI 71

Query: 43  ---RNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLY 99
              +  E+     HAE  AI  G        + +  LY T  PC +CA     A I+R+ 
Sbjct: 72  LSGQRHEICRAI-HAEQNAIIQGG--YHGINIKDSTLYCTHSPCVLCAKITVNAGIKRVI 128


>gi|218281132|ref|ZP_03487667.1| hypothetical protein EUBIFOR_00228 [Eubacterium biforme DSM 3989]
 gi|218217646|gb|EEC91184.1| hypothetical protein EUBIFOR_00228 [Eubacterium biforme DSM 3989]
          Length = 159

 Score = 65.3 bits (159), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 37/131 (28%), Positives = 48/131 (36%), Gaps = 26/131 (19%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNK-IISRAGN--------------RNR 45
           +     FM  A   A  +   N   VGA  V   K ++    N              R+ 
Sbjct: 6   LSWDQYFMGMAHLSAMRSKDPN-TRVGACIVNPQKRVVGLGYNGFPYGCEDDEFPWERDG 64

Query: 46  ELKDV----TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
           E  D       HAE+ AI     + S + L    LYV+L PC  CA AI  A I  + Y 
Sbjct: 65  EFLDTKYPYVVHAELNAI-----LNSIQDLHGCTLYVSLFPCNECAKAIIQAGITCVVY- 118

Query: 102 ASNPKGGGIEN 112
            S+   G   N
Sbjct: 119 ESDKYDGTEGN 129


>gi|255729574|ref|XP_002549712.1| hypothetical protein CTRG_04009 [Candida tropicalis MYA-3404]
 gi|240132781|gb|EER32338.1| hypothetical protein CTRG_04009 [Candida tropicalis MYA-3404]
          Length = 325

 Score = 65.3 bits (159), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 20/95 (21%), Positives = 38/95 (40%), Gaps = 10/95 (10%)

Query: 45  RELKDVTAHAEILAI----------RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLAR 94
            +  +   H+ + AI          R         +  ++ +Y T EPC MC  A+  +R
Sbjct: 207 NKKNNPKGHSIMKAISEIATREIENRKNKEHDRGYLCTDMIVYTTHEPCIMCCMALVHSR 266

Query: 95  IRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIY 129
           I R+ Y  +    GG+E+      +   +   +I+
Sbjct: 267 IARVTYINTAKNSGGLESHYHLGVIDGLNWKFQIW 301


>gi|156055334|ref|XP_001593591.1| hypothetical protein SS1G_05018 [Sclerotinia sclerotiorum 1980]
 gi|154702803|gb|EDO02542.1| hypothetical protein SS1G_05018 [Sclerotinia sclerotiorum 1980
           UF-70]
          Length = 358

 Score = 65.3 bits (159), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 29/122 (23%), Positives = 37/122 (30%), Gaps = 31/122 (25%)

Query: 4   GNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGN---------------RNRE 46
              FM  A   AQ +    R    VG V V   ++IS   N               R  E
Sbjct: 203 DQYFMQLASLAAQRSNCMKRR---VGCVLVREKRVISTGYNGTPRGLLNCGEGGCPRCNE 259

Query: 47  LKDV--------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98
            +            HAE  A+    R   +E      LY    PC  C+  I    I  +
Sbjct: 260 GQSCGVGLGTCLCLHAEENALLEAGRERVREN---AILYCDTCPCLTCSIKIVQVGISEV 316

Query: 99  YY 100
            Y
Sbjct: 317 VY 318


>gi|328768239|gb|EGF78286.1| hypothetical protein BATDEDRAFT_26851 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 156

 Score = 65.3 bits (159), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 27/117 (23%), Positives = 44/117 (37%), Gaps = 22/117 (18%)

Query: 3   KGNVFMSCALEEAQNAALRNEIP------VGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56
           +   +M  A+ EA  +     IP      VGAV VL+   +    +R         HAE 
Sbjct: 9   QDQAYMKLAIAEANKS-----IPSESAYCVGAVLVLHPSTVYTGYSRELPGN---THAEQ 60

Query: 57  LAIRMGCRI-LSQEILPEVDLYVTLEPC-------TMCAAAISLARIRRLYYGASNP 105
           + +       L  + + +  +Y T+EPC         C   +  A I ++  G   P
Sbjct: 61  VCLIKASHAGLDLDRMRDAIMYTTMEPCSLRLSGNLPCVNRLIDAGISKVLIGILEP 117


>gi|332157817|ref|YP_004423096.1| dCMP deaminase, putative [Pyrococcus sp. NA2]
 gi|331033280|gb|AEC51092.1| dCMP deaminase, putative [Pyrococcus sp. NA2]
          Length = 182

 Score = 65.3 bits (159), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 31/117 (26%), Positives = 39/117 (33%), Gaps = 24/117 (20%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNR--NRELKDV------ 50
            K   FM  A   +  A      P   VGAVAV +  I++   N         +      
Sbjct: 21  TKDEYFMLIAKLVSLRATC----PRLRVGAVAVKDGYILATGYNGAPRNMDHCIDVGCIM 76

Query: 51  -------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
                    HAE   I M  R      L    LYVT  PC  C   +  A I+ + Y
Sbjct: 77  VDGHCHRAVHAEQNVIAMAARKGIS--LEGATLYVTHFPCDTCLKLLINAGIKEIVY 131


>gi|197302162|ref|ZP_03167221.1| hypothetical protein RUMLAC_00888 [Ruminococcus lactaris ATCC
           29176]
 gi|197298593|gb|EDY33134.1| hypothetical protein RUMLAC_00888 [Ruminococcus lactaris ATCC
           29176]
          Length = 164

 Score = 65.3 bits (159), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 38/161 (23%), Positives = 55/161 (34%), Gaps = 40/161 (24%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVL-NNKIISRAGNR------------N 44
           +     FM  A+     +      P   VG   V  +NKI+S   N              
Sbjct: 11  LSWDEYFMGVAMLSGMRSKD----PNTQVGCCIVSQDNKILSMGYNGLPIGCSDDEFPWA 66

Query: 45  RELKDV-------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRR 97
           RE +D        T H+E+ AI       S   L    LYV+L PC  CA AI  + I+ 
Sbjct: 67  REGEDPLDTKYVYTTHSELNAILN----YSGGSLAGAKLYVSLFPCNECAKAIIQSGIKE 122

Query: 98  LYYGASN----PKGGGIEN-----GTQFYTLATCHHSPEIY 129
           + Y        P     +      G +++     +   EI 
Sbjct: 123 VIYDCDKYAHTPAVMASKRMMDAAGVRYHQYHRTNRKIEIE 163


>gi|66358600|ref|XP_626478.1| dCMP deaminase, Dcd1p like [Cryptosporidium parvum Iowa II]
 gi|46227806|gb|EAK88726.1| dCMP deaminase, Dcd1p like [Cryptosporidium parvum Iowa II]
          Length = 373

 Score = 65.3 bits (159), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 29/129 (22%), Positives = 38/129 (29%), Gaps = 45/129 (34%)

Query: 4   GNVFMSCALEEA--------QNAALRNEIPVGAVAVLNNKIISRAGN------------- 42
              FM  A + A        +         VG+V V + KIIS   N             
Sbjct: 225 DEYFMKIA-KLASQRSNCVSRK--------VGSVIVKDKKIISTGYNGTPKNMKNCFEGG 275

Query: 43  -------RNRELKD----VTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAIS 91
                     E K        HAE  A+         +      +YVTL PC  C   I 
Sbjct: 276 CTRCSNPNRVEGKSLETCSCMHAETNALLFA----GIDKCIGATIYVTLMPCISCTKNII 331

Query: 92  LARIRRLYY 100
              I R+ +
Sbjct: 332 QCEIERVVF 340


>gi|91791447|ref|YP_561098.1| CMP/dCMP deaminase, zinc-binding [Shewanella denitrificans OS217]
 gi|91713449|gb|ABE53375.1| CMP/dCMP deaminase, zinc-binding [Shewanella denitrificans OS217]
          Length = 147

 Score = 65.3 bits (159), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 28/87 (32%), Positives = 36/87 (41%), Gaps = 18/87 (20%)

Query: 26  VGAVAVLNNKIISRAGN-------RNRELKDV------TAHAEILAIRMGCRILSQEILP 72
           VGAV   +N+I+S   N        + E  D       T HAE  AI    R      L 
Sbjct: 27  VGAVITKHNRIVSVGFNGYPHGISDSAETDDRDMKLLKTLHAEENAILFAKR-----DLD 81

Query: 73  EVDLYVTLEPCTMCAAAISLARIRRLY 99
             D++VT  PC  CAA I    I  ++
Sbjct: 82  GCDIWVTHFPCPNCAAKIIQTGITGVF 108


>gi|168065799|ref|XP_001784834.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162663588|gb|EDQ50344.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 162

 Score = 65.3 bits (159), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 35/139 (25%), Positives = 48/139 (34%), Gaps = 36/139 (25%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKII--SRAGN------------- 42
           +   + FM+ A   A+ +      P   VGA  V  +++I      N             
Sbjct: 12  LSWDDYFMAIAFLSAKRSKD----PNRQVGACIVSQDRVILAGIGYNGFPRGCSDDQLPW 67

Query: 43  -RNRELKDVTA-------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLAR 94
            +  +  D          HAE+ AI       +        LYVTL PC  CA  I  A 
Sbjct: 68  AKKSQSGDPLQTKYPYVCHAEVNAILNKNHASA----SGQRLYVTLFPCNECAKIIIQAG 123

Query: 95  IRRLYYGASNPKGGGIENG 113
           I  + Y     KG  IEN 
Sbjct: 124 IAEVVY--YTDKGAHIENN 140


>gi|109290173|ref|YP_656422.1| dCMP deaminase [Aeromonas phage 25]
 gi|104345846|gb|ABF72746.1| dCMP deaminase [Aeromonas phage 25]
          Length = 172

 Score = 65.3 bits (159), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 25/109 (22%), Positives = 40/109 (36%), Gaps = 36/109 (33%)

Query: 26  VGAVAVLNNKIISRAGNRNRELK---------------DVT------------------- 51
           VGA+   + +IIS   N                     D+T                   
Sbjct: 24  VGAIISKDGRIISTGYNGTPAGCNHANCDDHAKKSGWLDLTVRLRGMYRQAHSEWSKANE 83

Query: 52  AHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
            HAE+ AI    +      +   +++VT+ PC  CA AI+ + I+R+ Y
Sbjct: 84  IHAELNAILYAAKTGQS--IDGAEMHVTVSPCPDCAKAIAQSGIKRVVY 130


>gi|315056975|ref|XP_003177862.1| hypothetical protein MGYG_08953 [Arthroderma gypseum CBS 118893]
 gi|311339708|gb|EFQ98910.1| hypothetical protein MGYG_08953 [Arthroderma gypseum CBS 118893]
          Length = 348

 Score = 65.3 bits (159), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 28/122 (22%), Positives = 37/122 (30%), Gaps = 31/122 (25%)

Query: 4   GNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGN-------RNRELKDV---- 50
              FM  A   AQ +    R    VG V V +N+++S   N          E        
Sbjct: 187 DQYFMQLASLAAQRSNCMKRR---VGCVVVKDNRVMSTGYNGTPRNVKNCNEGGCPRCNL 243

Query: 51  ------------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98
                         HAE  A+    R    E      LY    PC  C+  I+   I  +
Sbjct: 244 GQAGGTVLSTCLCIHAEENALLEAGRQRIGE---GSILYCDTCPCLTCSVKIAQVGISEV 300

Query: 99  YY 100
            Y
Sbjct: 301 VY 302


>gi|152964349|ref|YP_001360133.1| CMP/dCMP deaminase zinc-binding [Kineococcus radiotolerans
           SRS30216]
 gi|151358866|gb|ABS01869.1| CMP/dCMP deaminase zinc-binding [Kineococcus radiotolerans
           SRS30216]
          Length = 201

 Score = 65.3 bits (159), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 28/150 (18%), Positives = 47/150 (31%), Gaps = 14/150 (9%)

Query: 9   SCAL--EEAQNAALRN-EIPVGAVAVLNN--KIISRAGNRNRELKDVTAHAEILAIRMGC 63
             AL    A          P  AV   +   +I+S   N        + HAE+ A+ +  
Sbjct: 35  RMALVHRLAGRNFREGNGGPFAAVVADSGSGEIVSVGVNVVLSTGISSGHAEVAALGLAQ 94

Query: 64  RILSQEIL----PEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPK----GGGIENGTQ 115
                  L       +L V   PC  C  A   + +R L    S P+     G  E   +
Sbjct: 95  VRTGSWDLGADGARRELVVNWRPCAQCYGATLWSGVRTLVVAGSGPELEEITGFDEGPVR 154

Query: 116 FYTLATCHHS-PEIYPGISEQRSRQIIQDF 144
               A        +   +  + +  + +D+
Sbjct: 155 EDWAAQFEARGIAVVSDVLREEALAVYRDY 184


>gi|326203244|ref|ZP_08193109.1| CMP/dCMP deaminase zinc-binding [Clostridium papyrosolvens DSM
           2782]
 gi|325986502|gb|EGD47333.1| CMP/dCMP deaminase zinc-binding [Clostridium papyrosolvens DSM
           2782]
          Length = 145

 Score = 64.9 bits (158), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 25/98 (25%), Positives = 36/98 (36%), Gaps = 25/98 (25%)

Query: 26  VGAVAVLNNKIISRAGN--------------RNRELKDVTA---------HAEILAIRMG 62
           VGAV V + +I++   N                 +L   +          HAE  AI   
Sbjct: 27  VGAVIVKDKRILATGYNGAPVGCKHCSEVGCMREKLNIPSGQRHELCRAIHAEQNAIVQA 86

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
               S   +    LYVT +PC +CA     A I R+ +
Sbjct: 87  A--YSGTSVSGATLYVTNQPCVLCAKLAINAGIVRIVF 122


>gi|253743502|gb|EES99877.1| Hypothetical protein GL50581_2888 [Giardia intestinalis ATCC 50581]
          Length = 282

 Score = 64.9 bits (158), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 17/72 (23%), Positives = 28/72 (38%)

Query: 58  AIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFY 117
           A+          +L   D++   EPC  C+  +  ARIRR++Y       GG+       
Sbjct: 208 AMAQAADTDEAYLLTGYDVFTLEEPCIFCSMCLLHARIRRVFYSVPMEHNGGLNESLMVP 267

Query: 118 TLATCHHSPEIY 129
            L   +H   + 
Sbjct: 268 ALPGVNHKFPVI 279


>gi|242399255|ref|YP_002994679.1| Deoxycytidylate deaminase [Thermococcus sibiricus MM 739]
 gi|242265648|gb|ACS90330.1| Deoxycytidylate deaminase [Thermococcus sibiricus MM 739]
          Length = 180

 Score = 64.9 bits (158), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 33/117 (28%), Positives = 40/117 (34%), Gaps = 24/117 (20%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNR--NRELKDV------ 50
            K   FM  A    +   LR   P   VGAVAV +  I++   N         +      
Sbjct: 21  TKDEYFMLIA----KLVGLRATCPRLKVGAVAVKDGYILATGYNGAPRNMDHCIDVGCLV 76

Query: 51  -------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
                    HAE   I M  R      L    LYVT  PC  C   +  A IR + Y
Sbjct: 77  VDGHCHRAVHAEQNVIAMAARKGIS--LEGATLYVTHFPCDTCFKLLVNAGIREIIY 131


>gi|227432567|ref|ZP_03914548.1| competence protein ComEB [Leuconostoc mesenteroides subsp. cremoris
           ATCC 19254]
 gi|227351675|gb|EEJ41920.1| competence protein ComEB [Leuconostoc mesenteroides subsp. cremoris
           ATCC 19254]
          Length = 158

 Score = 64.9 bits (158), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 21/90 (23%), Positives = 36/90 (40%), Gaps = 17/90 (18%)

Query: 26  VGAVAVLNNKIISRAGNRNRE-------------LKDVTA--HAEILAIRMGCRILSQEI 70
           VGA+ V +N+II+   N +                       HAE  A+    ++     
Sbjct: 30  VGAIIVRDNRIIASGYNGSVSGTPHCTEVGDLMVDGHCIRAVHAEQNALMQAAKMGIT-- 87

Query: 71  LPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
           +   ++YVT  PC  C   +  A I ++Y+
Sbjct: 88  IDGSEVYVTDVPCVQCTKLLLQAGINKIYF 117


>gi|311069161|ref|YP_003974084.1| hypothetical protein BATR1942_11110 [Bacillus atrophaeus 1942]
 gi|310869678|gb|ADP33153.1| hypothetical protein BATR1942_11110 [Bacillus atrophaeus 1942]
          Length = 189

 Score = 64.9 bits (158), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 28/125 (22%), Positives = 46/125 (36%), Gaps = 25/125 (20%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRE----------- 46
           +     FM+ +   A  +      P   VGA  V + ++I+   N +             
Sbjct: 4   ISWNQYFMAQSHLLALRSTC----PRLSVGATIVRDKRMIAGGYNGSIAGGVHCADEGCF 59

Query: 47  ----LKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGA 102
                   T HAE+ AI    +          ++YVT  PC  C  +I  A I+ +Y+ A
Sbjct: 60  LIDDHCARTIHAEMNAILQCSKFGVPT--EGAEIYVTHYPCIQCCKSIIQAGIKTVYF-A 116

Query: 103 SNPKG 107
            + K 
Sbjct: 117 EDYKT 121


>gi|291278901|ref|YP_003495736.1| CMP/dCMP deaminase zinc-binding protein [Deferribacter
           desulfuricans SSM1]
 gi|290753603|dbj|BAI79980.1| CMP/dCMP deaminase, zinc-binding protein [Deferribacter
           desulfuricans SSM1]
          Length = 149

 Score = 64.9 bits (158), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 22/98 (22%), Positives = 34/98 (34%), Gaps = 25/98 (25%)

Query: 26  VGAVAVLNNKIISRAGN---RNRELKDVTA--------------------HAEILAIRMG 62
           VGAV V + +I++   N   R       T                     HAE  AI   
Sbjct: 27  VGAVIVKDRQILATGYNGVPRGITHCSETGCLRQKLNVPSGQRHELCRGLHAEQNAIIQA 86

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
                   +    +Y   +PC++C   I  A I+R+ +
Sbjct: 87  A--YHGVSIKGATIYTNAKPCSICTKMIINAGIKRIVF 122


>gi|62955247|ref|NP_001017639.1| deoxycytidylate deaminase [Danio rerio]
 gi|62202187|gb|AAH92809.1| DCMP deaminase [Danio rerio]
          Length = 201

 Score = 64.9 bits (158), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 32/116 (27%), Positives = 42/116 (36%), Gaps = 25/116 (21%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKD-------VTA---- 52
             FM+ A   AQ +   N   VGA  V   NKI+    N      D        +A    
Sbjct: 32  EYFMAVAFLSAQRSKDPNSQ-VGACIVNQENKIVGIGYNGMPNGCDDDLLPWSRSADNKL 90

Query: 53  --------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
                   HAE+ AI       +   +    +YV L PC  CA  I  A I+ + Y
Sbjct: 91  DTKYPYVCHAELNAIMN----KNSADVKGCSIYVALFPCNECAKLIIQAGIKDVIY 142


>gi|88798973|ref|ZP_01114554.1| putative deoxycytidylate deaminase [Reinekea sp. MED297]
 gi|88778200|gb|EAR09394.1| putative deoxycytidylate deaminase [Reinekea sp. MED297]
          Length = 149

 Score = 64.9 bits (158), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 26/86 (30%), Positives = 32/86 (37%), Gaps = 18/86 (20%)

Query: 26  VGAVAVLNNKIISRAGN-------------RNRELKDVTAHAEILAIRMGCRILSQEILP 72
           VGAV    N+I+S   N                     T HAE  AI    R      L 
Sbjct: 27  VGAVITEQNRIVSLGFNGYPHGISDSAETDDREMKLLKTLHAEENAILFAKR-----NLD 81

Query: 73  EVDLYVTLEPCTMCAAAISLARIRRL 98
           + D++VT  PC  CAA I    I  +
Sbjct: 82  DCDIWVTHFPCPNCAAKIIQTGISTV 107


>gi|312876091|ref|ZP_07736079.1| CMP/dCMP deaminase zinc-binding [Caldicellulosiruptor lactoaceticus
           6A]
 gi|311797077|gb|EFR13418.1| CMP/dCMP deaminase zinc-binding [Caldicellulosiruptor lactoaceticus
           6A]
          Length = 154

 Score = 64.9 bits (158), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 22/98 (22%), Positives = 37/98 (37%), Gaps = 25/98 (25%)

Query: 26  VGAVAVLNNKIISRAGN--------------RNRELKDVTA---------HAEILAIRMG 62
           VGA+ V + +I++   N                 +L   +          HAE  AI   
Sbjct: 27  VGALIVKDKRILATGYNGAPTGLPHCEEVGCLREKLNVPSGQRHELCRGLHAEQNAIIQA 86

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
            +     ++    +Y T  PC +CA  I  A I+++ Y
Sbjct: 87  AK--MGVVIDGSVIYTTTYPCVICAKMIVNAGIKKVIY 122


>gi|296828108|ref|XP_002851276.1| deoxycytidylate deaminase [Arthroderma otae CBS 113480]
 gi|238838830|gb|EEQ28492.1| deoxycytidylate deaminase [Arthroderma otae CBS 113480]
          Length = 349

 Score = 64.9 bits (158), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 28/123 (22%), Positives = 37/123 (30%), Gaps = 32/123 (26%)

Query: 4   GNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGN-------RNRELKDV---- 50
              FM  A   AQ +    R    VG V V +N+++S   N          E        
Sbjct: 187 DQYFMQLASLAAQRSNCMKRR---VGCVIVKDNRVMSTGYNGTPRKMKNCNEGGCPRCNL 243

Query: 51  ------------TAHAEILAIRMGCRILSQEILPEVDLYVTLE-PCTMCAAAISLARIRR 97
                         HAE  A+    R    E      LY     PC  C+  I+   I  
Sbjct: 244 GQAGGTVLSTCLCMHAEENALLEAGRQRIGE---GSILYCNTSCPCLTCSVKIAQLGISE 300

Query: 98  LYY 100
           + Y
Sbjct: 301 VVY 303


>gi|81428680|ref|YP_395680.1| putative type II secretion/competence system, dCMP deaminase
           ComEB-like [Lactobacillus sakei subsp. sakei 23K]
 gi|78610322|emb|CAI55371.1| Putative bacterial type II secretion/competence system, DCMP
           deaminase ComEB-like [Lactobacillus sakei subsp. sakei
           23K]
          Length = 162

 Score = 64.9 bits (158), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 24/90 (26%), Positives = 38/90 (42%), Gaps = 17/90 (18%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKD---------------VTAHAEILAIRMGCRILSQEI 70
           VGA+ + N +II+   N +   +D                T HAE+ A+    +   Q  
Sbjct: 30  VGALVIRNRRIIAGGYNGSVAHEDHCIDVGCLMRDGHCLRTIHAEMNALTQCAKFGVQT- 88

Query: 71  LPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
               ++YVT  PC  C   I  A I +++Y
Sbjct: 89  -EGAEIYVTHFPCLQCTKLIIQAGISKIHY 117


>gi|118580021|ref|YP_901271.1| CMP/dCMP deaminase [Pelobacter propionicus DSM 2379]
 gi|118502731|gb|ABK99213.1| CMP/dCMP deaminase, zinc-binding protein [Pelobacter propionicus
           DSM 2379]
          Length = 155

 Score = 64.9 bits (158), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 24/105 (22%), Positives = 36/105 (34%), Gaps = 27/105 (25%)

Query: 26  VGAVAVLNNKIISRAGN--------------RNRELKDVTA---------HAEILAIRMG 62
           VGA+ V +  I++   N                  L   +          HAE  AI   
Sbjct: 28  VGALLVKDRNILATGYNGAPSGISHCSEAGCLRERLNVPSGERHELCRGLHAEQNAIIQA 87

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY--GASNP 105
            R      +    LY T  PC +C   +  A IRR+ +  G ++ 
Sbjct: 88  ARHGVN--IDGATLYCTTMPCVICTKMLINAGIRRVVFDEGYADD 130


>gi|114564723|ref|YP_752237.1| CMP/dCMP deaminase, zinc-binding [Shewanella frigidimarina NCIMB
           400]
 gi|114336016|gb|ABI73398.1| CMP/dCMP deaminase, zinc-binding [Shewanella frigidimarina NCIMB
           400]
          Length = 144

 Score = 64.9 bits (158), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 26/86 (30%), Positives = 33/86 (38%), Gaps = 18/86 (20%)

Query: 26  VGAVAVLNNKIISRAGN-------------RNRELKDVTAHAEILAIRMGCRILSQEILP 72
           VGAV   NN+I+S   N                     T HAE  AI    R      L 
Sbjct: 27  VGAVITENNRIVSLGFNGYPHGISDSAETDNREMKLLKTLHAEENAILHAKR-----DLS 81

Query: 73  EVDLYVTLEPCTMCAAAISLARIRRL 98
             +++VT  PC  CAA I    +R +
Sbjct: 82  SCEIWVTHFPCPNCAAKIIQTGLRAV 107


>gi|212528774|ref|XP_002144544.1| deoxycytidylate deaminase, putative [Penicillium marneffei ATCC
           18224]
 gi|210073942|gb|EEA28029.1| deoxycytidylate deaminase, putative [Penicillium marneffei ATCC
           18224]
          Length = 354

 Score = 64.9 bits (158), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 29/122 (23%), Positives = 39/122 (31%), Gaps = 31/122 (25%)

Query: 4   GNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGN---RNRELKD--------- 49
              FM  A   AQ +    R    VG V V + ++IS   N   RN    +         
Sbjct: 193 DQYFMQLASLAAQRSNCMKRR---VGCVIVRDRRVISTGYNGTPRNITNCNEGGCPRCNR 249

Query: 50  -----------VTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98
                      +  HAE  A+    R   +E      LY    PC  C   I+   I  +
Sbjct: 250 GEGGGAGLSTCLCIHAEENALLEAGRERIRE---GAILYCDTCPCLTCTVKIAQVGISEV 306

Query: 99  YY 100
            Y
Sbjct: 307 VY 308


>gi|238917857|ref|YP_002931374.1| dCMP deaminase [Eubacterium eligens ATCC 27750]
 gi|238873217|gb|ACR72927.1| dCMP deaminase [Eubacterium eligens ATCC 27750]
          Length = 159

 Score = 64.9 bits (158), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 34/123 (27%), Positives = 46/123 (37%), Gaps = 28/123 (22%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVL-NNKIISRAGN-------------R 43
           +     FM  A      + +R++ P   VGA  V  +NKI+S   N              
Sbjct: 9   ISWDEYFMGIA----TLSGMRSKDPNTQVGACIVSQDNKILSMGYNGLPRGCSDDEFPWN 64

Query: 44  NRELKDV---TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
                +    T H+E+ AI           L    LYVTL PC  CA AI  A I+ + Y
Sbjct: 65  RDGEDNKYFYTTHSELNAILN----YRGGSLDNAKLYVTLFPCNECAKAIIQAGIKTVVY 120

Query: 101 GAS 103
              
Sbjct: 121 DCD 123


>gi|242765520|ref|XP_002340990.1| deoxycytidylate deaminase, putative [Talaromyces stipitatus ATCC
           10500]
 gi|218724186|gb|EED23603.1| deoxycytidylate deaminase, putative [Talaromyces stipitatus ATCC
           10500]
          Length = 388

 Score = 64.9 bits (158), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 29/122 (23%), Positives = 39/122 (31%), Gaps = 31/122 (25%)

Query: 4   GNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGN---RNRELKD--------- 49
              FM  A   AQ +    R    VG V V + ++IS   N   RN    +         
Sbjct: 227 DQYFMQLASLAAQRSNCMKRR---VGCVIVRDKRVISTGYNGTPRNITNCNEGGCPRCNR 283

Query: 50  -----------VTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98
                      +  HAE  A+    R   +E      LY    PC  C   I+   I  +
Sbjct: 284 GEGGGAGLSTCLCIHAEENALLEAGRERIRE---GAILYCDTCPCLTCTVKIAQVGISEV 340

Query: 99  YY 100
            Y
Sbjct: 341 VY 342


>gi|213965573|ref|ZP_03393767.1| riboflavin biosynthesis protein RibD [Corynebacterium amycolatum
           SK46]
 gi|213951732|gb|EEB63120.1| riboflavin biosynthesis protein RibD [Corynebacterium amycolatum
           SK46]
          Length = 350

 Score = 64.9 bits (158), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 26/113 (23%), Positives = 39/113 (34%), Gaps = 18/113 (15%)

Query: 8   MSCALEEAQNAALRN--EIPVGAVAVLNNKI-ISRAGNRNRELKDVTAHAEILAIRMGCR 64
           M+ A+E  Q          P+G V +    I +  AG           HAE  A+ M   
Sbjct: 19  MALAIEAGQRVRGTTYPNPPIGCVILDTAGIAVGVAGTEPVGG----RHAEPQALEMAG- 73

Query: 65  ILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIE 111
                        VTLEPC        C  A++ A + R+ +  ++P      
Sbjct: 74  ----PRAQGGTAVVTLEPCNHIGRTPPCTEALAAAGVSRVIFAVADPNPVAAG 122


>gi|225570086|ref|ZP_03779111.1| hypothetical protein CLOHYLEM_06182 [Clostridium hylemonae DSM
           15053]
 gi|225161556|gb|EEG74175.1| hypothetical protein CLOHYLEM_06182 [Clostridium hylemonae DSM
           15053]
          Length = 162

 Score = 64.9 bits (158), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 35/155 (22%), Positives = 55/155 (35%), Gaps = 36/155 (23%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVL-NNKIISRAGNR------------N 44
           +     FM  A+     +      P   VG   V  +NKI+S   N             +
Sbjct: 9   ISWDEYFMGVAMLSGMRSKD----PNTQVGCCIVSQDNKILSMGYNGLPIGCSDDEFPWD 64

Query: 45  RELKDV-------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRR 97
           RE +D        T H+E+ AI           L    LYV+L PC  CA AI  + I+ 
Sbjct: 65  REGEDPLETKYVYTVHSELNAILN----YRGGSLEGAKLYVSLFPCNECAKAIIQSGIKE 120

Query: 98  LYYGASN-PKGGGIENGTQFYTLATC----HHSPE 127
           + +  +       ++   + +  A      +H  E
Sbjct: 121 VIFDCNKYEDTAAVKASMRMFDAAGVRYHQYHRTE 155


>gi|310722262|ref|YP_003969086.1| dCMP deaminase [Aeromonas phage phiAS4]
 gi|306021105|gb|ADM79640.1| dCMP deaminase [Aeromonas phage phiAS4]
          Length = 172

 Score = 64.9 bits (158), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 25/109 (22%), Positives = 39/109 (35%), Gaps = 36/109 (33%)

Query: 26  VGAVAVLNNKIISRAGNRN-----RELKDVTA---------------------------- 52
           VGA+   + +IIS   N           D  A                            
Sbjct: 24  VGAIISKDGRIISTGYNGTPAGCNHANCDDHAKKSGWLDSYGKLRGMYRQAHSEWSKANE 83

Query: 53  -HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
            HAE+ AI    +      +   +++VT+ PC  CA AI+ + I+R+ Y
Sbjct: 84  IHAELNAILYAAKTGQS--IDGAEMHVTVSPCPDCAKAIAQSGIKRVVY 130


>gi|229493689|ref|ZP_04387474.1| riboflavin biosynthesis protein RibD [Rhodococcus erythropolis
           SK121]
 gi|229319650|gb|EEN85486.1| riboflavin biosynthesis protein RibD [Rhodococcus erythropolis
           SK121]
          Length = 350

 Score = 64.9 bits (158), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 22/118 (18%), Positives = 36/118 (30%), Gaps = 19/118 (16%)

Query: 25  PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84
           PVGAV +  +  I+      +       HAE++A+                  VTLEPC 
Sbjct: 35  PVGAVILAADGTIA-GVGMTQPPGGP--HAEVVALDEAGDAA-----RGGTAVVTLEPCN 86

Query: 85  M------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQR 136
                  C+ A+  A +  + Y   +P                      +  G+    
Sbjct: 87  HQGRTGPCSQALIDAGVSAVVYAVGDPNPEASGGAATLMRA-----GISVTAGLRAPE 139


>gi|226306507|ref|YP_002766467.1| riboflavin biosynthesis bifunctional protein RibG [Rhodococcus
           erythropolis PR4]
 gi|226185624|dbj|BAH33728.1| riboflavin biosynthesis bifunctional protein RibG [Rhodococcus
           erythropolis PR4]
          Length = 350

 Score = 64.9 bits (158), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 22/118 (18%), Positives = 36/118 (30%), Gaps = 19/118 (16%)

Query: 25  PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84
           PVGAV +  +  I+      +       HAE++A+                  VTLEPC 
Sbjct: 35  PVGAVILAADGTIA-GVGMTQPPGGP--HAEVVALDEAGDAA-----RGGTAVVTLEPCN 86

Query: 85  M------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQR 136
                  C+ A+  A +  + Y   +P                      +  G+    
Sbjct: 87  HQGRTGPCSQALIDAGVSAVVYAVGDPNPEASGGAATLMRA-----GISVTAGLRAPE 139


>gi|261367306|ref|ZP_05980189.1| putative deoxycytidylate deaminase [Subdoligranulum variabile DSM
           15176]
 gi|282570909|gb|EFB76444.1| putative deoxycytidylate deaminase [Subdoligranulum variabile DSM
           15176]
          Length = 159

 Score = 64.9 bits (158), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 33/119 (27%), Positives = 42/119 (35%), Gaps = 24/119 (20%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNR----NRELKDV----- 50
           +     FM  AL  A  +   N   VGA  V   NKI+S   N       +         
Sbjct: 7   ISWDEYFMGIALLSAMRSKDNNSQ-VGACIVSPENKILSLGYNGMPIGCNDDDMPWEREG 65

Query: 51  ---------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
                      H+E+ AI           L    +YVTL PC  CA AI  + I+ L Y
Sbjct: 66  DDLNTKYMYVCHSELNAILN----SPHNDLTGARMYVTLFPCNECAKAIIQSGIKELIY 120


>gi|222528649|ref|YP_002572531.1| CMP/dCMP deaminase zinc-binding [Caldicellulosiruptor bescii DSM
           6725]
 gi|222455496|gb|ACM59758.1| CMP/dCMP deaminase zinc-binding [Caldicellulosiruptor bescii DSM
           6725]
          Length = 148

 Score = 64.9 bits (158), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 22/98 (22%), Positives = 37/98 (37%), Gaps = 25/98 (25%)

Query: 26  VGAVAVLNNKIISRAGN--------------RNRELKDVTA---------HAEILAIRMG 62
           VGA+ V + +I++   N                 +L   +          HAE  AI   
Sbjct: 27  VGALIVKDKRILATGYNGAPTGLPHCDEVGCLREKLNVPSGQRHELCRGLHAEQNAIIQA 86

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
            +     ++    +Y T  PC +CA  I  A I+++ Y
Sbjct: 87  AK--MGVVIDGSVIYTTTYPCVICAKMIVNAGIKKVIY 122


>gi|14591367|ref|NP_143445.1| deoxycytidylate deaminase [Pyrococcus horikoshii OT3]
 gi|3258018|dbj|BAA30701.1| 182aa long hypothetical deoxycytidylate deaminase [Pyrococcus
           horikoshii OT3]
          Length = 182

 Score = 64.9 bits (158), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 31/117 (26%), Positives = 39/117 (33%), Gaps = 24/117 (20%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNR--NRELKDV------ 50
            K   FM  A   +  A      P   VGAVAV +  I++   N         +      
Sbjct: 21  TKDEYFMLIAKLVSLRATC----PRLRVGAVAVKDGYILATGYNGAPRNMDHCIDVGCIM 76

Query: 51  -------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
                    HAE   I M  R      L    LYVT  PC  C   +  A I+ + Y
Sbjct: 77  VDGHCHRAVHAEQNVIAMAARKGIS--LEGATLYVTHFPCDTCLKLLINAGIKEIVY 131


>gi|312080683|ref|XP_003142705.1| dCMP deaminase [Loa loa]
 gi|307762130|gb|EFO21364.1| dCMP deaminase [Loa loa]
          Length = 206

 Score = 64.9 bits (158), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 32/125 (25%), Positives = 45/125 (36%), Gaps = 31/125 (24%)

Query: 5   NVFMSCALEEAQNAALRNEIPV---GAVAVLNNK-IISRAGN----------------RN 44
             FM  A   A  +      PV   GAV V  +K I+    N                  
Sbjct: 48  EYFMGVAHMAALRSKD----PVTQVGAVIVNQDKRIVGSGYNGMPTGCSDDILPWSKGSE 103

Query: 45  RELKDVTA---HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
             L++ +A   HAE+ AI    +I+    +    +Y  L PC  CA  I  A I  + + 
Sbjct: 104 NFLENKSAYVCHAEMNAILN--KIVGS--IKGSTIYTVLFPCNECAKLIIQAGISEVVFQ 159

Query: 102 ASNPK 106
              PK
Sbjct: 160 REKPK 164


>gi|312128227|ref|YP_003993101.1| cmp/dcmp deaminase zinc-binding protein [Caldicellulosiruptor
           hydrothermalis 108]
 gi|311778246|gb|ADQ07732.1| CMP/dCMP deaminase zinc-binding protein [Caldicellulosiruptor
           hydrothermalis 108]
          Length = 154

 Score = 64.9 bits (158), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 22/98 (22%), Positives = 37/98 (37%), Gaps = 25/98 (25%)

Query: 26  VGAVAVLNNKIISRAGN--------------RNRELKDVTA---------HAEILAIRMG 62
           VGA+ V + +I++   N                 +L   +          HAE  AI   
Sbjct: 27  VGALIVKDKRILATGYNGAPTGLPHCEEVGCLREKLNVPSGQRHELCRGLHAEQNAIIQA 86

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
            +     ++    +Y T  PC +CA  I  A I+++ Y
Sbjct: 87  AK--MGVVIDGSVIYTTTYPCVICAKMIVNAGIKKVIY 122


>gi|312134555|ref|YP_004001893.1| cmp/dcmp deaminase zinc-binding protein [Caldicellulosiruptor
           owensensis OL]
 gi|311774606|gb|ADQ04093.1| CMP/dCMP deaminase zinc-binding protein [Caldicellulosiruptor
           owensensis OL]
          Length = 154

 Score = 64.9 bits (158), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 22/98 (22%), Positives = 37/98 (37%), Gaps = 25/98 (25%)

Query: 26  VGAVAVLNNKIISRAGN--------------RNRELKDVTA---------HAEILAIRMG 62
           VGA+ V + +I++   N                 +L   +          HAE  AI   
Sbjct: 27  VGALIVKDKRILATGYNGAPTGLPHCEEVGCLREKLNVPSGQRHELCRGLHAEQNAIIQA 86

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
            +     ++    +Y T  PC +CA  I  A I+++ Y
Sbjct: 87  AK--MGVVIDGSVIYTTTYPCVICAKMIVNAGIKKVIY 122


>gi|189192458|ref|XP_001932568.1| dCMP deaminase [Pyrenophora tritici-repentis Pt-1C-BFP]
 gi|187974174|gb|EDU41673.1| dCMP deaminase [Pyrenophora tritici-repentis Pt-1C-BFP]
          Length = 380

 Score = 64.9 bits (158), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 25/96 (26%), Positives = 32/96 (33%), Gaps = 24/96 (25%)

Query: 26  VGAVAVLNNKIISRAGN---RNRELKD------------------VTAHAEILAIRMGCR 64
           VGAV V + +IIS   N   R     +                  +  HAE  A+    R
Sbjct: 223 VGAVIVRDRRIISTGYNGTSRRNTNCNQGGCARCNSGTSGSLSACICLHAEENALLEAGR 282

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
               E      LY    PC  CA  I+   I  + Y
Sbjct: 283 ERIGE---GATLYCNTCPCLTCATKITQVGITEVVY 315


>gi|312623042|ref|YP_004024655.1| cmp/dcmp deaminase zinc-binding protein [Caldicellulosiruptor
           kronotskyensis 2002]
 gi|312203509|gb|ADQ46836.1| CMP/dCMP deaminase zinc-binding protein [Caldicellulosiruptor
           kronotskyensis 2002]
          Length = 148

 Score = 64.9 bits (158), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 22/98 (22%), Positives = 37/98 (37%), Gaps = 25/98 (25%)

Query: 26  VGAVAVLNNKIISRAGN--------------RNRELKDVTA---------HAEILAIRMG 62
           VGA+ V + +I++   N                 +L   +          HAE  AI   
Sbjct: 27  VGALIVKDKRILATGYNGAPTGIPHCDEVGCLREKLNVPSGQRHELCRGLHAEQNAIIQA 86

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
            +     ++    +Y T  PC +CA  I  A I+++ Y
Sbjct: 87  AK--MGVVIDGSVIYTTTYPCVICAKMIVNAGIKKVIY 122


>gi|167395901|ref|XP_001741796.1| tRNA-specific adenosine deaminase subunit TAD3 [Entamoeba dispar
           SAW760]
 gi|165893489|gb|EDR21735.1| tRNA-specific adenosine deaminase subunit TAD3, putative [Entamoeba
           dispar SAW760]
          Length = 287

 Score = 64.9 bits (158), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 18/86 (20%), Positives = 30/86 (34%), Gaps = 1/86 (1%)

Query: 44  NRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
             E      HA   A++         +    DL+ T EPC MC  A+  +R  R+++   
Sbjct: 198 TIESNHPLLHAPFNALQSIPLNHKHYLCTGFDLFTTHEPCLMCGMALLHSRFGRVFFIHQ 257

Query: 104 NPKGGGIENGTQFYTLATCHHSPEIY 129
           +   G              +H   +Y
Sbjct: 258 HKTNGAF-TVHHLNKKKQLNHHFNVY 282


>gi|319946726|ref|ZP_08020960.1| competence protein comEB [Streptococcus australis ATCC 700641]
 gi|319746774|gb|EFV99033.1| competence protein comEB [Streptococcus australis ATCC 700641]
          Length = 163

 Score = 64.5 bits (157), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 27/112 (24%), Positives = 41/112 (36%), Gaps = 19/112 (16%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRE------LKDV------- 50
              F + AL  +  A  +    VGAV V ++K+++   N +          D        
Sbjct: 17  DEYFAAQALLISNRATCKRAK-VGAVLVKDHKVVATGYNGSVSGTEHCLDHDCLMVEGHC 75

Query: 51  --TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
             T HAE+ AI  G      +       YVT  PC  C   +     +R+ Y
Sbjct: 76  VRTLHAEVNAILQGAERGIPK---GFTAYVTHFPCLNCTKQLLQVGCKRVVY 124


>gi|19113234|ref|NP_596442.1| deoxycytidylate deaminase (predicted) [Schizosaccharomyces pombe
           972h-]
 gi|74626715|sp|O43012|DCTD_SCHPO RecName: Full=Deoxycytidylate deaminase; AltName: Full=dCMP
           deaminase
 gi|2956780|emb|CAA17893.1| deoxycytidylate deaminase (predicted) [Schizosaccharomyces pombe]
          Length = 348

 Score = 64.5 bits (157), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 26/122 (21%), Positives = 37/122 (30%), Gaps = 31/122 (25%)

Query: 4   GNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGN-------RNRELKDV---- 50
            + FM  A   A+ +    R    VG V V  N++I+   N          E        
Sbjct: 201 DSYFMEMASLAAKRSNCMKRR---VGCVLVRGNRVIATGYNGTPRGATNCNEGGCPRCNS 257

Query: 51  ------------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98
                         HAE  A+    R           LY    PC  C+  I+   I+ +
Sbjct: 258 ASSCGKELDTCLCLHAEENALLEAGRERVG---NNAILYCDTCPCLTCSVKITQLGIKEV 314

Query: 99  YY 100
            Y
Sbjct: 315 VY 316


>gi|296134383|ref|YP_003641630.1| CMP/dCMP deaminase zinc-binding protein [Thermincola sp. JR]
 gi|296032961|gb|ADG83729.1| CMP/dCMP deaminase zinc-binding protein [Thermincola potens JR]
          Length = 147

 Score = 64.5 bits (157), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 25/98 (25%), Positives = 37/98 (37%), Gaps = 25/98 (25%)

Query: 26  VGAVAVLNNKIISRAGN---RNRELKDVTA--------------------HAEILAIRMG 62
           VGAV V +N+I++   N   R     D T                     HAE   I   
Sbjct: 27  VGAVIVRDNRILASGYNGPPRGLRHCDETGCLRDKLNIPSGERHELCRGLHAEQNVIIQA 86

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
              +    +     Y+T +PC +CA  I  A I+++ Y
Sbjct: 87  A--MHGINIQGGTFYITHQPCILCAKMIVNAGIKKVVY 122


>gi|289742059|gb|ADD19777.1| tRNA-specific adenosine-34 deaminase subunit [Glossina morsitans
           morsitans]
          Length = 344

 Score = 64.5 bits (157), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 15/71 (21%), Positives = 36/71 (50%)

Query: 64  RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123
                 +    D+Y++ EPC MC+ A+  +R++R+++   +   G ++   +   +   +
Sbjct: 273 AKFGPYLCTGYDVYLSQEPCLMCSMALLHSRVKRIFFLYESKINGSLKTNFKLQQVKDLN 332

Query: 124 HSPEIYPGISE 134
           H  E+Y  ++E
Sbjct: 333 HHYEVYQFVAE 343


>gi|14520789|ref|NP_126264.1| dCMP deaminase, putative [Pyrococcus abyssi GE5]
 gi|5458005|emb|CAB49495.1| dCMP deaminase, putative [Pyrococcus abyssi GE5]
          Length = 182

 Score = 64.5 bits (157), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 31/117 (26%), Positives = 39/117 (33%), Gaps = 24/117 (20%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNR--NRELKDV------ 50
            K   FM  A   +  A      P   VGAVAV +  I++   N         +      
Sbjct: 21  TKDEYFMLIAKLVSLRATC----PRLRVGAVAVKDGYILATGYNGAPRNMDHCIDVGCIM 76

Query: 51  -------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
                    HAE   I M  R      L    LYVT  PC  C   +  A I+ + Y
Sbjct: 77  VDGHCHRAVHAEQNVIAMAARKGIS--LEGATLYVTHFPCDTCLKLLINAGIKEIVY 131


>gi|326918570|ref|XP_003205561.1| PREDICTED: deoxycytidylate deaminase-like [Meleagris gallopavo]
          Length = 190

 Score = 64.5 bits (157), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 30/119 (25%), Positives = 41/119 (34%), Gaps = 31/119 (26%)

Query: 5   NVFMSCALEEAQNAALRNEIP---VGAVAV-LNNKIISRAGN------------------ 42
             FM+ A   AQ +      P   VGA  V   NKI+    N                  
Sbjct: 29  EYFMAVAFLSAQRSKD----PSSQVGACIVNSENKIVGIGYNGMPNGCSDDALPWTRTAA 84

Query: 43  RNRELKDV-TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
              + K     HAE+ AI       +   +    +YV L PC  CA  I  A I+ + +
Sbjct: 85  HRLDTKYPYVCHAELNAIMN----KNSADVKGCSMYVALFPCNECAKLIIQAGIKEVIF 139


>gi|325264269|ref|ZP_08131000.1| putative deoxycytidylate deaminase [Clostridium sp. D5]
 gi|324030340|gb|EGB91624.1| putative deoxycytidylate deaminase [Clostridium sp. D5]
          Length = 162

 Score = 64.5 bits (157), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 32/126 (25%), Positives = 45/126 (35%), Gaps = 31/126 (24%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVL-NNKIISRAGNRN------------ 44
           +     FM  A+     +      P   VG   V  +NKI+S   N              
Sbjct: 9   LSWDEYFMGVAMLSGMRSKD----PNTQVGCCIVSPDNKILSMGYNGFPIGCSDDEFPWA 64

Query: 45  RELKDV-------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRR 97
           RE  D        + H+E+ AI       +   L    LYV+L PC  CA AI  + I+ 
Sbjct: 65  REGDDPLETKYVYSTHSELNAILN----YNGGSLAGAKLYVSLFPCNECAKAIIQSGIKE 120

Query: 98  LYYGAS 103
           + Y   
Sbjct: 121 VIYDCD 126


>gi|323699085|ref|ZP_08110997.1| CMP/dCMP deaminase, zinc-binding [Desulfovibrio sp. ND132]
 gi|323459017|gb|EGB14882.1| CMP/dCMP deaminase, zinc-binding [Desulfovibrio desulfuricans
           ND132]
          Length = 152

 Score = 64.5 bits (157), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 27/119 (22%), Positives = 41/119 (34%), Gaps = 26/119 (21%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRN---RELKDVTA--------- 52
             FM  A   AQ +       VGA+AV + +I++   N         DV           
Sbjct: 9   EYFMRIAHLVAQRSTCTR-RAVGAIAVRDKRILATGYNGVPTNIAHCDVVGCLRDQLGIP 67

Query: 53  -----------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
                      HAE   I       +   L   D+Y T +PC +C   +    ++ +YY
Sbjct: 68  SGERHELCRGLHAEQNVIIQAA--TNNLDLKGCDIYCTTKPCILCTKMLINCGVQNIYY 124


>gi|326792204|ref|YP_004310025.1| dCMP deaminase [Clostridium lentocellum DSM 5427]
 gi|326542968|gb|ADZ84827.1| dCMP deaminase [Clostridium lentocellum DSM 5427]
          Length = 169

 Score = 64.5 bits (157), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 31/129 (24%), Positives = 41/129 (31%), Gaps = 37/129 (28%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVL--------NNKIISRAGNRN----- 44
           +   + FM  AL  A+ +      P   VGA  V          N I+S   N       
Sbjct: 7   ISWDDYFMGIALLAAKRSKD----PSTQVGACIVSGASHDSANENTILSVGYNGLPLGCS 62

Query: 45  ------RELKDVTA-------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAIS 91
                     D          HAE+ AI         + L    +YV L PC  C  AI 
Sbjct: 63  DDEFPWERDGDFLDTKYPFVVHAELNAILNA----RGKSLVGARIYVALFPCNECCKAII 118

Query: 92  LARIRRLYY 100
              I+ + Y
Sbjct: 119 QCGIKEVIY 127


>gi|330934131|ref|XP_003304428.1| hypothetical protein PTT_17018 [Pyrenophora teres f. teres 0-1]
 gi|311318971|gb|EFQ87490.1| hypothetical protein PTT_17018 [Pyrenophora teres f. teres 0-1]
          Length = 286

 Score = 64.5 bits (157), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 25/96 (26%), Positives = 32/96 (33%), Gaps = 24/96 (25%)

Query: 26  VGAVAVLNNKIISRAGN---RNRELKD------------------VTAHAEILAIRMGCR 64
           VGAV V + +IIS   N   R     +                  +  HAE  A+    R
Sbjct: 129 VGAVIVRDRRIISTGYNGTSRRNTNCNQGGCRRCNSGTSGSLSACICLHAEENALLEAGR 188

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
               E      LY    PC  CA  I+   I  + Y
Sbjct: 189 ERIGE---GATLYCNTCPCLTCATKITQVGITEVVY 221


>gi|19922544|ref|NP_611345.1| CG10927 [Drosophila melanogaster]
 gi|7302591|gb|AAF57672.1| CG10927 [Drosophila melanogaster]
 gi|17862074|gb|AAL39514.1| LD07624p [Drosophila melanogaster]
 gi|220942946|gb|ACL84016.1| CG10927-PA [synthetic construct]
 gi|220953166|gb|ACL89126.1| CG10927-PA [synthetic construct]
          Length = 360

 Score = 64.5 bits (157), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 17/77 (22%), Positives = 38/77 (49%), Gaps = 3/77 (3%)

Query: 55  EILAIRMG--CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN 112
           E+ A++           +    D+Y+  EPC MC+ A+  +R +R+++   N + G +  
Sbjct: 274 EVDAVQGADNLAKFGPYLCTGYDIYLLQEPCLMCSMALVHSRAKRVFF-VKNSENGALAT 332

Query: 113 GTQFYTLATCHHSPEIY 129
             Q +++   +H  E++
Sbjct: 333 RFQLHSVRELNHHYEVF 349


>gi|315230719|ref|YP_004071155.1| dCMP deaminase [Thermococcus barophilus MP]
 gi|315183747|gb|ADT83932.1| dCMP deaminase [Thermococcus barophilus MP]
          Length = 181

 Score = 64.5 bits (157), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 31/117 (26%), Positives = 38/117 (32%), Gaps = 24/117 (20%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNR--------------- 43
            K   FM  A   +  A      P   VGAVAV +  I++   N                
Sbjct: 21  TKDEYFMLIAKLVSLRATC----PRLRVGAVAVKDGYILATGYNGAPRGMDHCIDVGCLI 76

Query: 44  NRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
                    HAE   I M  R      L    LYVT  PC  C   +  A I+ + Y
Sbjct: 77  VDGHCHRAVHAEQNVIAMAARKGIS--LEGATLYVTHFPCDTCFKLLVNAGIKEIVY 131


>gi|289450291|ref|YP_003474389.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Clostridiales genomosp. BVAB3 str. UPII9-5]
 gi|289184838|gb|ADC91263.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Clostridiales genomosp. BVAB3 str. UPII9-5]
          Length = 165

 Score = 64.5 bits (157), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 35/122 (28%), Positives = 43/122 (35%), Gaps = 30/122 (24%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVL-NNKIISRAGN-------------R 43
           +     FM  AL  AQ +      P   VGA  V  NN+IIS   N              
Sbjct: 8   LSWDEYFMGVALLSAQRSKD----PNTQVGACIVSPNNRIISVGYNGLPYGCSDETFPWE 63

Query: 44  NRELKDVT-----AHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98
                  T      HAE+ AI          IL    +YV L PC  C+ AI  A +  +
Sbjct: 64  REGDYLSTKYPYVCHAELNAILN----NPGAILHGARIYVDLFPCNECSKAIIQAGLVEV 119

Query: 99  YY 100
            Y
Sbjct: 120 IY 121


>gi|329770386|ref|ZP_08261768.1| ComE operon protein 2 [Gemella sanguinis M325]
 gi|328836509|gb|EGF86169.1| ComE operon protein 2 [Gemella sanguinis M325]
          Length = 154

 Score = 64.5 bits (157), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 28/116 (24%), Positives = 43/116 (37%), Gaps = 18/116 (15%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGN--------------RNRE 46
           +     FM+ +   +  +     + VGA  V + +II+   N              +  E
Sbjct: 4   ISWDEYFMAQSHLLSLRSTCSR-LSVGATIVKDKRIIAGGYNGSIKGDEHCIDVGCKVIE 62

Query: 47  LKDV-TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
              V T HAEI AI    +           +YVT  PC  C  +I  A I+ + Y 
Sbjct: 63  GHCVRTIHAEINAILQCSKFGVCT--EGATIYVTHFPCLNCTKSIIQAGIKEICYA 116


>gi|262274059|ref|ZP_06051871.1| deoxycytidylate deaminase [Grimontia hollisae CIP 101886]
 gi|262221869|gb|EEY73182.1| deoxycytidylate deaminase [Grimontia hollisae CIP 101886]
          Length = 152

 Score = 64.5 bits (157), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 25/86 (29%), Positives = 33/86 (38%), Gaps = 18/86 (20%)

Query: 26  VGAVAVLNNKIISRAGNR-------------NRELKDVTAHAEILAIRMGCRILSQEILP 72
           VGAV    N+I+S   N                     T HAE  AI    R      L 
Sbjct: 27  VGAVITKGNRIVSVGFNGYPHGISDSAETDGREMKLLKTLHAEENAILFAKR-----DLL 81

Query: 73  EVDLYVTLEPCTMCAAAISLARIRRL 98
           + +++VT  PC  CAA I    I ++
Sbjct: 82  DCEIWVTHFPCPNCAAKIIQTGISQV 107


>gi|12654885|gb|AAH01286.1| DCMP deaminase [Homo sapiens]
          Length = 178

 Score = 64.5 bits (157), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 32/116 (27%), Positives = 42/116 (36%), Gaps = 25/116 (21%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGN-RNRELKD------VTA---- 52
             FM+ A   AQ +   N   VGA  V   NKI+    N       D       TA    
Sbjct: 17  EYFMAVAFLSAQRSKDPNSQ-VGACIVNSENKIVGIGYNGMPNGCSDDVLPWRRTAENKL 75

Query: 53  --------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
                   HAE+ AI       +   +    +YV L PC  CA  I  A I+ + +
Sbjct: 76  DTKYPYVCHAELNAIMN----KNLTDVKGCSMYVALFPCNECAKLIIQAGIKEVIF 127


>gi|298207386|ref|YP_003715565.1| cytidine/deoxycytidylate deaminase family protein [Croceibacter
           atlanticus HTCC2559]
 gi|83850022|gb|EAP87890.1| cytidine/deoxycytidylate deaminase family protein [Croceibacter
           atlanticus HTCC2559]
          Length = 143

 Score = 64.5 bits (157), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 28/117 (23%), Positives = 43/117 (36%), Gaps = 25/117 (21%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTA-------- 52
           +K    ++  A E  Q +  + +  VGA+ V +  IIS   N        T         
Sbjct: 7   LKYDKAYLRIAREWGQLSHCKRKQ-VGALIVKDRMIISDGYNGT-----PTGFENYCEDD 60

Query: 53  ---------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
                    HAE  AI             +  LY+T+ PC  C+  I  + I+R+ Y
Sbjct: 61  EGYTKWYVLHAEANAILKVAGSTQSCR--DATLYITMSPCKDCSKLIHQSGIKRVVY 115


>gi|268572593|ref|XP_002641361.1| Hypothetical protein CBG13218 [Caenorhabditis briggsae]
          Length = 294

 Score = 64.5 bits (157), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 25/102 (24%), Positives = 47/102 (46%), Gaps = 5/102 (4%)

Query: 27  GAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEIL-PEVDLYVTLEPCTM 85
           G ++V N+ ++S              HA +  +    +    + L    D+++  EPC M
Sbjct: 167 GCISVQNDILLSSGS----PSTHPLGHAVMEMVGNLQKRTGSDYLGTGADVFLLNEPCAM 222

Query: 86  CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
           C+ A+   RI+RL+Y  S+  G   ++G Q +   + +H  E
Sbjct: 223 CSMALVHFRIKRLFYVISSRNGVLKDDGWQLHLEPSINHHYE 264


>gi|312792827|ref|YP_004025750.1| cmp/dcmp deaminase zinc-binding protein [Caldicellulosiruptor
           kristjanssonii 177R1B]
 gi|312179967|gb|ADQ40137.1| CMP/dCMP deaminase zinc-binding protein [Caldicellulosiruptor
           kristjanssonii 177R1B]
          Length = 154

 Score = 64.5 bits (157), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 22/98 (22%), Positives = 37/98 (37%), Gaps = 25/98 (25%)

Query: 26  VGAVAVLNNKIISRAGN--------------RNRELKDVTA---------HAEILAIRMG 62
           VGA+ V + +I++   N                 +L   +          HAE  AI   
Sbjct: 27  VGALIVKDKRILATGYNGAPTGLPHCEEVGCLREKLNVPSGQRHELCRGLHAEQNAIIQA 86

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
            +     ++    +Y T  PC +CA  I  A I+++ Y
Sbjct: 87  AK--MGVVIDGSVIYTTTYPCVICAKMIVNAGIKKVIY 122


>gi|291515202|emb|CBK64412.1| Deoxycytidylate deaminase [Alistipes shahii WAL 8301]
          Length = 145

 Score = 64.5 bits (157), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 25/87 (28%), Positives = 32/87 (36%), Gaps = 14/87 (16%)

Query: 26  VGAVAVLNNKIISRAGNRN-----------RELKDV-TAHAEILAIRMGCRILSQEILPE 73
           VGA+ V +  IIS   N                      HAE  AI    +  +      
Sbjct: 33  VGALIVKDKMIISDGYNGTPSGFENVCEDDEGHTKPYVLHAEANAITKVAKSANNCD--G 90

Query: 74  VDLYVTLEPCTMCAAAISLARIRRLYY 100
             LY+T  PC  C+  I  A IRR+ Y
Sbjct: 91  STLYITAAPCIECSKLIIQAGIRRVVY 117


>gi|326692447|ref|ZP_08229452.1| ComE operon protein 2 [Leuconostoc argentinum KCTC 3773]
          Length = 160

 Score = 64.5 bits (157), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 23/90 (25%), Positives = 35/90 (38%), Gaps = 17/90 (18%)

Query: 26  VGAVAVLNNKIISRAGN-RNRELKDVTA--------------HAEILAIRMGCRILSQEI 70
           VGAV V NN+II+   N         T               HAE  A+    ++     
Sbjct: 30  VGAVLVKNNRIIASGYNGAVAGTPHCTDVGDLIVDGHCIRAVHAEQNALMQAAQMGIS-- 87

Query: 71  LPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
           + +  +YVT  PC  C   +  A + ++ Y
Sbjct: 88  VADATVYVTDVPCVHCTKLLLQAGVSKINY 117


>gi|270291422|ref|ZP_06197644.1| ComE operon protein 2 [Pediococcus acidilactici 7_4]
 gi|270280268|gb|EFA26104.1| ComE operon protein 2 [Pediococcus acidilactici 7_4]
          Length = 160

 Score = 64.5 bits (157), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 25/116 (21%), Positives = 45/116 (38%), Gaps = 20/116 (17%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDV---------- 50
           +     FM+ AL  +  +  +  + VGA+ V + ++I+   N +    DV          
Sbjct: 5   IDWDQYFMTQALLLSLRSTCKR-LSVGAIIVRDRRVIAGGYNGSVS-GDVHCLDEGCYLV 62

Query: 51  ------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
                 T HAE+ A+    +          ++YVT  PC  C   +    I ++ Y
Sbjct: 63  DGHCVRTIHAEMNAVLQCSKFGVATD--GAEIYVTDFPCLQCTKMLLQTGIVKINY 116


>gi|218290658|ref|ZP_03494749.1| CMP/dCMP deaminase zinc-binding [Alicyclobacillus acidocaldarius
           LAA1]
 gi|218239323|gb|EED06521.1| CMP/dCMP deaminase zinc-binding [Alicyclobacillus acidocaldarius
           LAA1]
          Length = 151

 Score = 64.5 bits (157), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 32/115 (27%), Positives = 45/115 (39%), Gaps = 18/115 (15%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGN--------------RNRE 46
           M   + F S A   A  +     + VG V V + +II+   N              +  +
Sbjct: 8   MDWHSFFASQARVMAARSTCTR-LQVGCVIVRDKRIIASGYNGSIHGDEHCVDVGCKVVD 66

Query: 47  LKDVTA-HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
              V A HAE  A+    R          DLYVT  PC  C  ++  A IRR++Y
Sbjct: 67  GHCVRAIHAEQNALLQCARFGIAA--EGADLYVTHTPCLTCTKSLIQAGIRRVFY 119


>gi|308177749|ref|YP_003917155.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino) uracil
           reductase [Arthrobacter arilaitensis Re117]
 gi|307745212|emb|CBT76184.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino) uracil
           reductase [Arthrobacter arilaitensis Re117]
          Length = 346

 Score = 64.5 bits (157), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 32/148 (21%), Positives = 55/148 (37%), Gaps = 18/148 (12%)

Query: 8   MSCALEEAQNAALRNEIPVG-AVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           +  ALE A          VG  V      II+   +          HAE+ A+R   ++ 
Sbjct: 11  LRTALETAGRGYRGANPLVGACVLDAEGNIIATGFHLGAGH----PHAEVDALRRLGKMS 66

Query: 67  SQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
             +   E+ + VTLEPC        CA AI+ A I +++Y   +        G  +    
Sbjct: 67  PAKA-RELTMVVTLEPCNHTGRTGPCARAIAEAGIGQVHYAVPDNT--AASGGADYLRSQ 123

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFFKER 148
               + ++        +R + Q +F  +
Sbjct: 124 GI-QATQLE---CSDAARNLNQRWFIAK 147


>gi|296117961|ref|ZP_06836544.1| riboflavin biosynthesis protein RibD [Corynebacterium ammoniagenes
           DSM 20306]
 gi|295969192|gb|EFG82434.1| riboflavin biosynthesis protein RibD [Corynebacterium ammoniagenes
           DSM 20306]
          Length = 355

 Score = 64.5 bits (157), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 28/106 (26%), Positives = 39/106 (36%), Gaps = 17/106 (16%)

Query: 25  PVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83
           PVGAV V    +I+     +        AHAE+ A+                  VTLEPC
Sbjct: 38  PVGAVMVSTAGEIVGTGATQPAGG----AHAEVQALAEAV-----GRTDGATAVVTLEPC 88

Query: 84  TM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123
                   C  A+  A I+ +YY  S+P       G +    A  +
Sbjct: 89  RHTGRTGPCTQALIEAGIQEVYYLHSDPNPEA-GGGAEALREAGVN 133


>gi|262282453|ref|ZP_06060221.1| comE operon protein 2 family protein [Streptococcus sp. 2_1_36FAA]
 gi|262261744|gb|EEY80442.1| comE operon protein 2 family protein [Streptococcus sp. 2_1_36FAA]
          Length = 155

 Score = 64.5 bits (157), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 29/112 (25%), Positives = 40/112 (35%), Gaps = 19/112 (16%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKD-------------- 49
              F + AL  A  +  +    VGAV V  NK+IS   N +    +              
Sbjct: 9   DEYFAAQALLIANRSTCKRAR-VGAVLVKENKVISTGYNGSVSGTEHCIDHECLVVDGHC 67

Query: 50  -VTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
             T HAE+ AI  G      +       YVT  PC  C   +     +R+ Y
Sbjct: 68  VRTLHAEVNAILQGAERGVPK---GFTAYVTHFPCLNCTKQLLQVGCKRVVY 116


>gi|159107798|ref|XP_001704175.1| Hypothetical protein GL50803_8208 [Giardia lamblia ATCC 50803]
 gi|157432229|gb|EDO76501.1| Hypothetical protein GL50803_8208 [Giardia lamblia ATCC 50803]
          Length = 299

 Score = 64.5 bits (157), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 19/85 (22%), Positives = 36/85 (42%), Gaps = 4/85 (4%)

Query: 49  DVTAHAEILAIRMGCRILSQEI----LPEVDLYVTLEPCTMCAAAISLARIRRLYYGASN 104
           D+  H    AI    +  +++     L   D++   EPC  C+  +  AR++R++Y A  
Sbjct: 207 DMLRHPVYTAIEQAMKQAAEDDKAYLLTGYDVFALEEPCIFCSMCLLHARVKRVFYSAFM 266

Query: 105 PKGGGIENGTQFYTLATCHHSPEIY 129
              GG+       +L   +H   + 
Sbjct: 267 GHNGGLNESLMVPSLPGVNHRFPVI 291


>gi|229829440|ref|ZP_04455509.1| hypothetical protein GCWU000342_01530 [Shuttleworthia satelles DSM
           14600]
 gi|229791871|gb|EEP27985.1| hypothetical protein GCWU000342_01530 [Shuttleworthia satelles DSM
           14600]
          Length = 191

 Score = 64.2 bits (156), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 33/122 (27%), Positives = 45/122 (36%), Gaps = 30/122 (24%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVL-NNKIISRAGNRN-----------R 45
           +     FM  A      A +R++ P   VGA  V   NKI+S   N              
Sbjct: 39  ISWDEYFMGVA----ALAGMRSKDPNTQVGACIVSSQNKILSIGYNGLPIGCSDDEFPWN 94

Query: 46  ELKDV-------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98
              +        T H+E+ AI           L    +YVTL PC  CA AI  A I+ +
Sbjct: 95  REGNPLENKYFYTTHSELNAILN----YRGGSLEGTKMYVTLFPCNECAKAIIQAGIKEI 150

Query: 99  YY 100
            +
Sbjct: 151 IF 152


>gi|195119971|ref|XP_002004502.1| GI19969 [Drosophila mojavensis]
 gi|193909570|gb|EDW08437.1| GI19969 [Drosophila mojavensis]
          Length = 358

 Score = 64.2 bits (156), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 17/77 (22%), Positives = 37/77 (48%), Gaps = 7/77 (9%)

Query: 53  HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN 112
           HA+ L            +    D+Y+  EPC MC+ A+  +R++R+++   +   G + +
Sbjct: 285 HADNLC------KYGPYLCTGYDVYLLREPCLMCSMALVHSRVKRIFFLEQSEN-GALTS 337

Query: 113 GTQFYTLATCHHSPEIY 129
             Q + +   +H  E++
Sbjct: 338 KFQLHAVKELNHHYEVF 354


>gi|91202838|emb|CAJ72477.1| similar to dCMP deaminase [Candidatus Kuenenia stuttgartiensis]
          Length = 158

 Score = 64.2 bits (156), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 27/119 (22%), Positives = 43/119 (36%), Gaps = 26/119 (21%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGN--------------RNRELKD 49
              F+    E A+ +       VGAV VL   I++   N                 +L+ 
Sbjct: 8   DEYFLRITKEVARRSTCLR-RQVGAVLVLEKHILATGYNGAPSGLQHCLEIGCLREQLRV 66

Query: 50  VTA---------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLY 99
                       HAE+ A+    R   +  +    LY T  PC++CA  +  A I+R+ 
Sbjct: 67  PPGERHELCRGLHAEMNALIQAARYGIK--ISGATLYSTTCPCSLCAKMLVNAGIKRIV 123


>gi|254283965|ref|ZP_04958933.1| cytosine deaminase [gamma proteobacterium NOR51-B]
 gi|219680168|gb|EED36517.1| cytosine deaminase [gamma proteobacterium NOR51-B]
          Length = 137

 Score = 64.2 bits (156), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 21/79 (26%), Positives = 29/79 (36%), Gaps = 6/79 (7%)

Query: 16 QNAALRNEIPVGAVAVL--NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPE 73
          +        P+GAV V     +I+ +  N   +      H E  AIR    I        
Sbjct: 2  RKRFREGGCPIGAVIVDRVTREIVGKGHNTLVQENYPYNHRETAAIREAGHI----DFSR 57

Query: 74 VDLYVTLEPCTMCAAAISL 92
            L  TL PC +CA  I +
Sbjct: 58 CVLVTTLSPCDICARLIIM 76


>gi|258517245|ref|YP_003193467.1| ComE operon protein 2 [Desulfotomaculum acetoxidans DSM 771]
 gi|257780950|gb|ACV64844.1| ComE operon protein 2 [Desulfotomaculum acetoxidans DSM 771]
          Length = 154

 Score = 64.2 bits (156), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 30/115 (26%), Positives = 42/115 (36%), Gaps = 18/115 (15%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGN-----RNRELKDVTA--- 52
           +     FM  A   A  ++    + VG + V + + I+   N         L D      
Sbjct: 4   ISWHEYFMGQAKIIALRSSCSR-LSVGCLIVRDRRSIAGGYNGSVSGDVHCLDDGCRIDN 62

Query: 53  -------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
                  HAE  AI    +  +       D+YVT  PC  CA  I  A IR +YY
Sbjct: 63  GHCVRCVHAEANAIVQCAKFGAST--EGTDIYVTHFPCLNCAKLIIQAGIRHVYY 115


>gi|319789749|ref|YP_004151382.1| CMP/dCMP deaminase zinc-binding protein [Thermovibrio ammonificans
           HB-1]
 gi|317114251|gb|ADU96741.1| CMP/dCMP deaminase zinc-binding protein [Thermovibrio ammonificans
           HB-1]
          Length = 148

 Score = 64.2 bits (156), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 32/128 (25%), Positives = 43/128 (33%), Gaps = 32/128 (25%)

Query: 4   GNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGN--------------RNREL 47
              FMS A   A  +    R    VGAV V + +IIS   N                 +L
Sbjct: 7   DEYFMSIAQMVATRSTCLRRQ---VGAVLVKDKRIISTGYNGPPSGLKHPEEVGCLREKL 63

Query: 48  KDVTA---------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98
              +          HAE  AI      L         LY T  PC++C   +  A I ++
Sbjct: 64  GIPSGERHELCRGLHAEQNAIIQAA--LHGVSTKGSVLYCTHCPCSLCVKMLINAGIEKV 121

Query: 99  YY--GASN 104
            Y  G  +
Sbjct: 122 IYKEGYPD 129


>gi|210623304|ref|ZP_03293721.1| hypothetical protein CLOHIR_01671 [Clostridium hiranonis DSM 13275]
 gi|210153705|gb|EEA84711.1| hypothetical protein CLOHIR_01671 [Clostridium hiranonis DSM 13275]
          Length = 149

 Score = 64.2 bits (156), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 26/130 (20%), Positives = 43/130 (33%), Gaps = 46/130 (35%)

Query: 4   GNVFMSCALEEAQNAALRNEIP----------VGAVAVLNNKIISRAGN----------- 42
              FM  A           E+           VGA+ V + +I++   N           
Sbjct: 6   DEYFMEIA-----------EVVKKRSTCIRRQVGAIIVKDKQILTTGYNGAPKNLEHCQN 54

Query: 43  ---RNRELKDVTA---------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAI 90
              +  ++   +          HAE  AI       +   + +  LYVT  PC +CA   
Sbjct: 55  IGCKREQMHIPSGERHELCRALHAEQNAIIQAA--YNGVSIKDATLYVTTRPCVLCAKMC 112

Query: 91  SLARIRRLYY 100
             A I+++ Y
Sbjct: 113 INAGIKKIIY 122


>gi|304385135|ref|ZP_07367481.1| ComE operon protein 2 [Pediococcus acidilactici DSM 20284]
 gi|304329329|gb|EFL96549.1| ComE operon protein 2 [Pediococcus acidilactici DSM 20284]
          Length = 163

 Score = 64.2 bits (156), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 25/116 (21%), Positives = 45/116 (38%), Gaps = 20/116 (17%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDV---------- 50
           +     FM+ AL  +  +  +  + VGA+ V + ++I+   N +    DV          
Sbjct: 8   IDWDQYFMTQALLLSLRSTCKR-LSVGAIIVRDRRVIAGGYNGSVS-GDVHCLDEGCYLV 65

Query: 51  ------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
                 T HAE+ A+    +          ++YVT  PC  C   +    I ++ Y
Sbjct: 66  DGHCVRTIHAEMNAVLQCSKFGVATD--GAEIYVTDFPCLQCTKMLLQTGIVKINY 119


>gi|220927719|ref|YP_002504628.1| CMP/dCMP deaminase zinc-binding [Clostridium cellulolyticum H10]
 gi|219998047|gb|ACL74648.1| CMP/dCMP deaminase zinc-binding [Clostridium cellulolyticum H10]
          Length = 145

 Score = 64.2 bits (156), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 24/98 (24%), Positives = 35/98 (35%), Gaps = 25/98 (25%)

Query: 26  VGAVAVLNNKIISRAGN--------------RNRELKDVTA---------HAEILAIRMG 62
           +GAV V   +I++   N                 +L   +          HAE  AI   
Sbjct: 27  IGAVIVKEKRILASGYNGAPVGCKHCSEVGCLREKLNIPSGQRHELCRAIHAEQNAIVQA 86

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
               S   +    LYVT +PC +CA     A I R+ +
Sbjct: 87  A--YSGTSVSGATLYVTNQPCVLCAKLAINAGIVRIVF 122


>gi|167520965|ref|XP_001744821.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163776435|gb|EDQ90054.1| predicted protein [Monosiga brevicollis MX1]
          Length = 143

 Score = 64.2 bits (156), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 27/117 (23%), Positives = 40/117 (34%), Gaps = 25/117 (21%)

Query: 7   FMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGN----------RNRELKDV----- 50
           +MS A+  A+ +   N   VG   +  +  ++S   N             +         
Sbjct: 12  YMSMAMLAAKRSKDPN-TQVGCTIINPDGIVVSMGYNGFPIGCSDQELPWQKHSANPLET 70

Query: 51  ----TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
                 HAE+ AI       + E +    LY TL PC  CA  I  A I  + Y   
Sbjct: 71  KFPYVCHAEMNAILN----TNDESVRGCTLYATLFPCNECAKMIIQAGIVEVVYLCD 123


>gi|126139263|ref|XP_001386154.1| DRAP deaminase [Scheffersomyces stipitis CBS 6054]
 gi|126093436|gb|ABN68125.1| DRAP deaminase [Scheffersomyces stipitis CBS 6054]
          Length = 585

 Score = 64.2 bits (156), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 33/155 (21%), Positives = 53/155 (34%), Gaps = 32/155 (20%)

Query: 4   GNVFMSCALEEAQNAAL-RNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
              FM  +LE A      + +  VGAV V   K+++   +R         HAE  A+   
Sbjct: 433 HRKFMELSLEMANKCDETQTQYNVGAVLVNRGKVLATGHSRELPGN---THAEQCALEKY 489

Query: 63  CRILSQEILP-EVDLYVTLEPC-------TMCAAAISLARIRRLYYGASNPK-------- 106
                +  +P   ++Y T+EPC         CA  I    I+  + G   P         
Sbjct: 490 FEETGKREIPKGTEIYTTMEPCTLRLSGNIPCADRIIGTTIKTCFVGIVEPDTFVKNNSC 549

Query: 107 -GGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140
                ENG ++  +              E+   +I
Sbjct: 550 SAKFAENGIEYIHIPGY-----------EEECLKI 573


>gi|330999408|ref|ZP_08323122.1| ComE operon protein 2 family protein [Parasutterella
           excrementihominis YIT 11859]
 gi|329574834|gb|EGG56393.1| ComE operon protein 2 family protein [Parasutterella
           excrementihominis YIT 11859]
          Length = 138

 Score = 64.2 bits (156), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 29/114 (25%), Positives = 44/114 (38%), Gaps = 18/114 (15%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKD-----------V 50
           K   ++M+ A   AQ +  +  + VG + V N+ IIS   N      D           V
Sbjct: 5   KDNEMYMTIAQIAAQRSYAKR-LKVGCIIVKNHSIISFGWNGMPTGYDNCCEYEVDGKLV 63

Query: 51  TA----HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
           T     HAE+ AI       +        +++T  PC  C+  I    I  +YY
Sbjct: 64  TRPEVQHAELNAI--AKLAQNGYSSNGAKIFITHSPCIHCSLLIQKCGINEVYY 115


>gi|240103131|ref|YP_002959440.1| Deoxycytidylate deaminase (dCMP deaminase) [Thermococcus
           gammatolerans EJ3]
 gi|239910685|gb|ACS33576.1| Deoxycytidylate deaminase (dCMP deaminase) [Thermococcus
           gammatolerans EJ3]
          Length = 177

 Score = 64.2 bits (156), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 31/117 (26%), Positives = 38/117 (32%), Gaps = 24/117 (20%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNR--------------- 43
            K   FM  A   +  A      P   VGAVAV +  I++   N                
Sbjct: 21  TKDEYFMLIAKLVSLRATC----PRLRVGAVAVKDGYILATGYNGAPRGMDHCIDVGCLI 76

Query: 44  NRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
                    HAE   I M  R      L    LYVT  PC  C   +  A I+ + Y
Sbjct: 77  VDGHCHRAVHAEQNVIAMAARKGIS--LEGATLYVTHFPCDTCFKLVINAGIKEIVY 131


>gi|303272905|ref|XP_003055814.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226463788|gb|EEH61066.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 354

 Score = 64.2 bits (156), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 25/88 (28%), Positives = 40/88 (45%), Gaps = 8/88 (9%)

Query: 50  VTA-HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGG 108
            TA  AE+ A      I    +    D+Y   EPC MCA A++ +R+RR+ Y   + + G
Sbjct: 272 PTASLAEMTA-----EIGRGYLCTGYDVYCAREPCVMCAMALTHSRVRRVIYAIPSARHG 326

Query: 109 GIENG-TQFYTLATCHHSPEIYP-GISE 134
            +  G        T +H  ++Y  G+  
Sbjct: 327 ALGGGAYSLQKERTLNHHYDVYTFGVDA 354


>gi|170741291|ref|YP_001769946.1| riboflavin biosynthesis protein RibD [Methylobacterium sp. 4-46]
 gi|168195565|gb|ACA17512.1| riboflavin biosynthesis protein RibD [Methylobacterium sp. 4-46]
          Length = 398

 Score = 64.2 bits (156), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 31/148 (20%), Positives = 51/148 (34%), Gaps = 25/148 (16%)

Query: 4   GNVFMSCALEEAQNAALRN--EIPVGAVAVLN----NKIISRAGNRNRELKDVTAHAEIL 57
              +M  AL   +    R      VGAV V       +I+++   +         HAE +
Sbjct: 23  DRRYMRLALALGRRHLGRTWPNPSVGAVLVAGPPGAERILAQGVTQPGGR----PHAERV 78

Query: 58  AIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIE 111
           A+       + E      LYVTLEPC+       CA A+  A + R+    ++P      
Sbjct: 79  AL-----AEAGEAARGATLYVTLEPCSHHGRTSPCADAVLAAGVARVVSAMNDPDPRVAG 133

Query: 112 NGTQFYTLATCHHSPEIYPGISEQRSRQ 139
            G              +  G   + + +
Sbjct: 134 RGHGRLRAGG----VAVTVGPCAEEAAR 157


>gi|256378033|ref|YP_003101693.1| riboflavin biosynthesis protein RibD [Actinosynnema mirum DSM
           43827]
 gi|255922336|gb|ACU37847.1| riboflavin biosynthesis protein RibD [Actinosynnema mirum DSM
           43827]
          Length = 341

 Score = 64.2 bits (156), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 33/153 (21%), Positives = 54/153 (35%), Gaps = 23/153 (15%)

Query: 1   MKKGNVFMSCALEEAQN-AALRNEIP-VGAVAV-LNNKIISRAGNRNRELKDVTAHAEIL 57
           M   +  M+ ALE A          P VG V +  +  +++   +R        A     
Sbjct: 1   MLTEHEAMARALELAATPGVPLGPNPRVGCVLLADDGTVVAEGHHRGAGTAHAEA----- 55

Query: 58  AIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIE 111
                    +          VTLEPC        CA A+  A +RR+ +  S+P      
Sbjct: 56  ----DALAEAGAAARGTTAVVTLEPCNHTGRTGPCARALVEAGVRRVVFAQSDPNPVATG 111

Query: 112 NGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
            GT+    A      E+  G+   R+R + + +
Sbjct: 112 -GTRTLRDAG----IEVEHGLMADRARALNRAW 139


>gi|323145928|gb|ADX32169.1| hypothetical protein [Pseudomonas phage P3_CHA]
 gi|323146114|gb|ADX32354.1| hypothetical protein [Pseudomonas phage PAK_P3]
          Length = 138

 Score = 64.2 bits (156), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 36/116 (31%), Positives = 45/116 (38%), Gaps = 21/116 (18%)

Query: 1   MKKG--NVFMSCA--LEEAQNAALRNEIPVGAVAVLNNKIISRAGN-----------RNR 45
           MK+     FM CA    E           VGAV V  NKIIS+  N              
Sbjct: 1   MKQKHKEAFMRCAESFAECSVGVRAK---VGAVIVQGNKIISQGYNGLPSGLEGPLENEE 57

Query: 46  ELKDV-TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
            +      HAE  A+       SQE      ++ T+ PC  CA  I  A I+R+YY
Sbjct: 58  GVTRPEVRHAEKNAL--LWLSCSQESAQGAWMFATMSPCEYCAHDIVDAGIKRVYY 111


>gi|145355155|ref|XP_001421833.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144582072|gb|ABP00127.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 125

 Score = 64.2 bits (156), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 30/125 (24%), Positives = 44/125 (35%), Gaps = 33/125 (26%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNK-IISRAGN-------------- 42
           +   + FMS A   AQ +      P   VGA  V  +K I+    N              
Sbjct: 5   LSWDDYFMSVAFLSAQRSKD----PNKQVGACIVGKDKLILGVGYNGFPRGCPDNALPWS 60

Query: 43  RNRELKDVT-------AHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARI 95
           +     D          HAE+ AI       +   +    L+VT+ PC  CA  +  A I
Sbjct: 61  KKSANDDPLETKYAYVCHAEMNAIMN----KNSASVAGGSLFVTMYPCNECAKLVIQAGI 116

Query: 96  RRLYY 100
           + + Y
Sbjct: 117 KEVVY 121


>gi|221639820|ref|YP_002526082.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
           5-amino-6-(5- phosphoribosylamino)uracil reductase
           [Rhodobacter sphaeroides KD131]
 gi|221160601|gb|ACM01581.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase /
           5-amino-6-(5- phosphoribosylamino)uracil reductase
           [Rhodobacter sphaeroides KD131]
          Length = 362

 Score = 64.2 bits (156), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 32/155 (20%), Positives = 46/155 (29%), Gaps = 22/155 (14%)

Query: 1   MKKGNVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           M   +  M+ AL        R      VG V V   +++ R             HAE + 
Sbjct: 1   MTDADH-MAHALRLGARGLGRTWPNPAVGCVIVKAGRVVGRGWTCPGGR----PHAEPV- 54

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
                   +         YVTLEPC        CA A+  A + R+     +P       
Sbjct: 55  ----ALAQAGAAALGATAYVTLEPCSHHGRTPPCAEALIAAGLARVVTATGDPDPRVSGR 110

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
           G      A       +   + E  +R     F K 
Sbjct: 111 GHAMLREAG----IAVTERVLEAEARTAHAGFLKR 141


>gi|163793213|ref|ZP_02187189.1| hypothetical protein BAL199_25529 [alpha proteobacterium BAL199]
 gi|159181859|gb|EDP66371.1| hypothetical protein BAL199_25529 [alpha proteobacterium BAL199]
          Length = 369

 Score = 64.2 bits (156), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 25/94 (26%), Positives = 35/94 (37%), Gaps = 17/94 (18%)

Query: 3  KGNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
            + +M+ AL  A +A        PVG V V + +I+     R R       HAE +A+ 
Sbjct: 6  DDDRWMALALRLAHSAVGDTAENPPVGCVLVRDGRIVG----RGRTGSGGRPHAEAVALA 61

Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAA 88
                          +VTLEPC        CA 
Sbjct: 62 QAGNAA-----RGATAFVTLEPCAHHGRTPPCAD 90


>gi|291526381|emb|CBK91968.1| Deoxycytidylate deaminase [Eubacterium rectale DSM 17629]
 gi|291526826|emb|CBK92412.1| Deoxycytidylate deaminase [Eubacterium rectale M104/1]
          Length = 161

 Score = 64.2 bits (156), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 33/134 (24%), Positives = 46/134 (34%), Gaps = 30/134 (22%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLN-NKIISRAGN-------------R 43
           +     FM  A+     +      P   VGA  V   +KI+S   N              
Sbjct: 11  ISWDEYFMGIAMLSGMRSKD----PNTQVGACIVDPEHKILSMGYNGFPLGCSDDEFTWA 66

Query: 44  NRELKDV---TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
                +    + H+E+ AI           L    +YVTL PC  CA AI  + IR + Y
Sbjct: 67  REGEDNKYFYSTHSELNAILN----YRGGSLEGATIYVTLFPCNECAKAIIQSGIREVVY 122

Query: 101 GASNPKGGGIENGT 114
                K  G  + T
Sbjct: 123 DC--DKYEGTASVT 134


>gi|332638741|ref|ZP_08417604.1| dCMP deaminase [Weissella cibaria KACC 11862]
          Length = 161

 Score = 64.2 bits (156), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 25/110 (22%), Positives = 39/110 (35%), Gaps = 18/110 (16%)

Query: 6   VFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRE-------------LKDVTA 52
            FM  A   A  +       VGAV V + +II+   N +                     
Sbjct: 11  YFMMQAAMLASRSTCTRLH-VGAVVVKDGRIIASGYNGSVTGTPHCTEVGDLLVDGHCIR 69

Query: 53  --HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
             HAE  A+    ++         ++YVT  PC  C   +  A I+++ Y
Sbjct: 70  AVHAEQNALMQLAKMGIAA--EGAEIYVTDFPCVHCTKFLLQAGIKKINY 117


>gi|210633850|ref|ZP_03297865.1| hypothetical protein COLSTE_01782 [Collinsella stercoris DSM 13279]
 gi|210159019|gb|EEA89990.1| hypothetical protein COLSTE_01782 [Collinsella stercoris DSM 13279]
          Length = 156

 Score = 64.2 bits (156), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 34/145 (23%), Positives = 48/145 (33%), Gaps = 31/145 (21%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVL-NNKIISRAGNRNRELKD------V 50
           +     FM  A+  +  +      P   VGA     NN+I+S   N      +       
Sbjct: 9   ISWDEFFMRAAVAASLRSKD----PNTQVGACIADTNNRILSVGYNGTPSALNDDDFPWG 64

Query: 51  TA------------HAEILAIRMGCRILSQ-EILPEVDLYVTLEPCTMCAAAISLARIRR 97
           TA            HAE  AI          + +    +YVTL PC  CA  +  A I  
Sbjct: 65  TADDPLHDKHNYVIHAEANAI---LNYRGSLKDMAGATVYVTLFPCHECAKTLVQAGIGE 121

Query: 98  LYYGASNPKGGGIENGTQFYTLATC 122
           + Y   +   G  +N      L  C
Sbjct: 122 VVY-LDDKYCGTEDNLISKNILDRC 145


>gi|302871258|ref|YP_003839894.1| CMP/dCMP deaminase zinc-binding [Caldicellulosiruptor obsidiansis
           OB47]
 gi|302574117|gb|ADL41908.1| CMP/dCMP deaminase zinc-binding [Caldicellulosiruptor obsidiansis
           OB47]
          Length = 154

 Score = 64.2 bits (156), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 22/98 (22%), Positives = 37/98 (37%), Gaps = 25/98 (25%)

Query: 26  VGAVAVLNNKIISRAGNR--------------NRELKDVTA---------HAEILAIRMG 62
           VGA+ V + +I++   N                 +L   +          HAE  AI   
Sbjct: 27  VGALIVKDKRILATGYNGAPMGLPHCEEVGCVREKLNIPSGQRHELCRGLHAEQNAIIQA 86

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
            +     ++    +Y T  PC +CA  I  A I+++ Y
Sbjct: 87  AK--MGVVIDGSIIYTTTYPCVICAKMIVNAGIKKVIY 122


>gi|262038435|ref|ZP_06011809.1| dCMP deaminase [Leptotrichia goodfellowii F0264]
 gi|261747530|gb|EEY34995.1| dCMP deaminase [Leptotrichia goodfellowii F0264]
          Length = 161

 Score = 64.2 bits (156), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 30/122 (24%), Positives = 43/122 (35%), Gaps = 31/122 (25%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNK-IISRAGNRN-----------R 45
           +     FM  A      +      P   VGA  +  +K II    N              
Sbjct: 8   LSWDEYFMGIAFLSGMRSKD----PSTQVGACIIDEDKKIIGIGYNGFPMGSSDDNMPWN 63

Query: 46  ELKDVTA-------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98
           +  D          HAE+ AI     + S + L    +YVT  PC  CA AI  + I+++
Sbjct: 64  KEGDFLNTKYPYVVHAELNAI-----LNSIKSLKNAIIYVTHFPCNECAKAIVQSGIKKV 118

Query: 99  YY 100
            Y
Sbjct: 119 IY 120


>gi|323448590|gb|EGB04487.1| putative deoxycytidine deaminase [Aureococcus anophagefferens]
          Length = 188

 Score = 63.8 bits (155), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 20/86 (23%), Positives = 31/86 (36%), Gaps = 13/86 (15%)

Query: 26  VGAVAVLNNKIISRAGNR--NRELK---------DVTAHAEILAIRMGCRILSQEILPEV 74
           VG V V + ++++   N                   T HAE+ A+    R      L   
Sbjct: 81  VGCVIVRDRRVLAMGYNGFFRNAPHTSIVAHGHEQATVHAEVNAVSHAARTGIA--LDGA 138

Query: 75  DLYVTLEPCTMCAAAISLARIRRLYY 100
             Y+T  PC  C   +  A I+ + Y
Sbjct: 139 SAYITHYPCVNCFKTLVSAGIKEVRY 164


>gi|313231032|emb|CBY19030.1| unnamed protein product [Oikopleura dioica]
          Length = 75

 Score = 63.8 bits (155), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 13/50 (26%), Positives = 24/50 (48%)

Query: 2  KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVT 51
          +    ++      A+ A  R E+PVG + V  N+ I +  N + + K+ T
Sbjct: 9  QDDFYWLEKTFAYAEEALDRGEVPVGCLIVYENREIGKGSNNSNKDKNAT 58


>gi|23012876|ref|ZP_00052863.1| COG2131: Deoxycytidylate deaminase [Magnetospirillum
           magnetotacticum MS-1]
          Length = 140

 Score = 63.8 bits (155), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 29/118 (24%), Positives = 47/118 (39%), Gaps = 23/118 (19%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAV-LNNKIISRAGN--------RNRELK 48
           M   + FM  A   A  +      P   VGAVAV  + +I +   N        +   ++
Sbjct: 3   MNWYDYFMGFARHAASKSKD----PSTQVGAVAVGPDGEIRATGYNGLPRGVEDKPERME 58

Query: 49  DV-----TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
                  T+HAE   +    R+     L    +YVT  PC+ CA ++  A + ++  G
Sbjct: 59  RPAKYLWTSHAEENLVAHAARVGVS--LKGCTVYVTHYPCSRCARSLIQAGVAKINVG 114


>gi|82541649|ref|XP_725051.1| cytidine/deoxycytidylate deaminase [Plasmodium yoelii yoelii str.
           17XNL]
 gi|23479911|gb|EAA16616.1| Cytidine and deoxycytidylate deaminase zinc-binding region,
           putative [Plasmodium yoelii yoelii]
          Length = 378

 Score = 63.8 bits (155), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 17/59 (28%), Positives = 34/59 (57%)

Query: 77  YVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQ 135
           Y+T EPC MCA A+  +RI+ + +   N + G + +  + + L + +H  ++Y  + E+
Sbjct: 319 YLTHEPCFMCAMAMVHSRIKCVIFDKVNKENGALFSRGKLHCLKSLNHHFKVYKTVREK 377


>gi|147679158|ref|YP_001213373.1| deoxycytidylate deaminase [Pelotomaculum thermopropionicum SI]
 gi|146275255|dbj|BAF61004.1| deoxycytidylate deaminase [Pelotomaculum thermopropionicum SI]
          Length = 165

 Score = 63.8 bits (155), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 25/120 (20%), Positives = 41/120 (34%), Gaps = 26/120 (21%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGN--------------RNRELKD 49
              FM  A   A+ +       VGAV V   +I++   N                 + K 
Sbjct: 22  DEYFMDIAEVVARRSTCLR-RQVGAVIVKERRILASGYNGAPAGLKHCLETGCLREQKKV 80

Query: 50  VTA---------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
                       HAE  A+      +    +     YVT +PC +CA  +  A I+++ +
Sbjct: 81  PPGERHELCRGLHAEQNALIQAA--VYGTAIQGAVCYVTHQPCVLCAKILINAGIKKVVF 138


>gi|164688345|ref|ZP_02212373.1| hypothetical protein CLOBAR_01990 [Clostridium bartlettii DSM
           16795]
 gi|164602758|gb|EDQ96223.1| hypothetical protein CLOBAR_01990 [Clostridium bartlettii DSM
           16795]
          Length = 163

 Score = 63.8 bits (155), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 30/122 (24%), Positives = 42/122 (34%), Gaps = 30/122 (24%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVL-NNKIISRAGNRN-----------R 45
           +     FM  +L     +      P   VGA  V  +N+I+S   N              
Sbjct: 7   ISWDEYFMGISLLSGMRSKD----PSTQVGACIVDSDNRIVSIGYNGFLNGCSDEDFPWE 62

Query: 46  ELKDVTA-------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98
              D          HAE  AI         + L    +YV L PC  CA  I  + I+++
Sbjct: 63  REGDFLNTKYPYVVHAEQNAILNA----RGKNLEGCSIYVNLFPCHDCARNIIQSGIKKV 118

Query: 99  YY 100
           YY
Sbjct: 119 YY 120


>gi|224036452|pdb|2W4L|A Chain A, Human Dcmp Deaminase
 gi|224036453|pdb|2W4L|B Chain B, Human Dcmp Deaminase
 gi|224036454|pdb|2W4L|C Chain C, Human Dcmp Deaminase
 gi|224036455|pdb|2W4L|D Chain D, Human Dcmp Deaminase
 gi|224036456|pdb|2W4L|E Chain E, Human Dcmp Deaminase
 gi|224036457|pdb|2W4L|F Chain F, Human Dcmp Deaminase
          Length = 178

 Score = 63.8 bits (155), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 32/116 (27%), Positives = 42/116 (36%), Gaps = 25/116 (21%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGN-RNRELKD------VTA---- 52
             FM+ A   AQ +   N   VGA  V   NKI+    N       D       TA    
Sbjct: 14  EYFMAVAFLSAQRSKDPNSQ-VGACIVNSENKIVGIGYNGMPNGCSDDVLPWRRTAENKL 72

Query: 53  --------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
                   HAE+ AI       +   +    +YV L PC  CA  I  A I+ + +
Sbjct: 73  DTKYPYVCHAELNAIMN----KNLTDVKGCSMYVALFPCNECAKLIIQAGIKEVIF 124


>gi|302541057|ref|ZP_07293399.1| riboflavin biosynthesis protein RibD [Streptomyces hygroscopicus
           ATCC 53653]
 gi|302458675|gb|EFL21768.1| riboflavin biosynthesis protein RibD [Streptomyces himastatinicus
           ATCC 53653]
          Length = 362

 Score = 63.8 bits (155), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 27/108 (25%), Positives = 39/108 (36%), Gaps = 20/108 (18%)

Query: 8   MSCALEEAQNAALR---NEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
           M  A+  A         N + VG V +    +      ++         HAE+ A+R   
Sbjct: 1   MRRAVALAARGLGHTSPNPV-VGCVILDAEGQPAGEGWHQRAGG----PHAEVHALRAAG 55

Query: 64  RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP 105
                E        VTLEPC        CA A+  A I R+ Y  ++P
Sbjct: 56  -----ERARGGTALVTLEPCNHTGRTGPCARALLDAGIARVRYAVADP 98


>gi|269114924|ref|YP_003302687.1| Deoxycytidylate deaminase [Mycoplasma hominis]
 gi|268322549|emb|CAX37284.1| Deoxycytidylate deaminase [Mycoplasma hominis ATCC 23114]
          Length = 158

 Score = 63.8 bits (155), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 34/123 (27%), Positives = 49/123 (39%), Gaps = 32/123 (26%)

Query: 12  LEEAQNAALRNEIP---VGAVAVLNNK-IISRA--------------------GNRNREL 47
           +  A+ +ALR++ P   VGA  V  +  +IS                       NR    
Sbjct: 1   MSLAKLSALRSKDPLTKVGACIVSPDNYVISLGYNGMPTSYLNKEVNNDDLFTWNRPTTQ 60

Query: 48  KDVTA-------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
            DV         HAE  AI     I + +I+P   LYVT  PC  CA  I  ++I ++ Y
Sbjct: 61  NDVLNSKYTYVVHAEANAIINA-NITNSKIIPGSILYVTHSPCYHCAKLIVQSKISKVVY 119

Query: 101 GAS 103
             +
Sbjct: 120 AVA 122


>gi|254578372|ref|XP_002495172.1| ZYRO0B05082p [Zygosaccharomyces rouxii]
 gi|238938062|emb|CAR26239.1| ZYRO0B05082p [Zygosaccharomyces rouxii]
          Length = 611

 Score = 63.8 bits (155), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 29/123 (23%), Positives = 46/123 (37%), Gaps = 24/123 (19%)

Query: 1   MKKGNVFMSCALEEAQN------AALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHA 54
           ++    +M  ALE+A        A       VGAV +   ++IS   +R         HA
Sbjct: 457 LEPHRKYMKLALEQAAKCGPTTTAFS-----VGAVLINGTEVISTGYSRELPGN---THA 508

Query: 55  EILAIRMGCRILSQEILP-EVDLYVTLEPCT-------MCAAAISLA--RIRRLYYGASN 104
           E  A+           LP +  +Y T+EPC+        C   I     +I+ ++ G   
Sbjct: 509 EQCALEKYFSNTGSSELPEDTIIYTTMEPCSFRLSGNDPCVQRIINTNGKIKTVFVGVLE 568

Query: 105 PKG 107
           P  
Sbjct: 569 PDT 571


>gi|119945263|ref|YP_942943.1| CMP/dCMP deaminase, zinc-binding [Psychromonas ingrahamii 37]
 gi|119863867|gb|ABM03344.1| CMP/dCMP deaminase, zinc-binding [Psychromonas ingrahamii 37]
          Length = 183

 Score = 63.8 bits (155), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 27/94 (28%), Positives = 40/94 (42%), Gaps = 5/94 (5%)

Query: 26  VGAVAV-LNNKIISRAGNRN--RELKDVTAHAEILAIRMG-CRILSQEILPEVDLYVTLE 81
           VGA+    N+ I+  AGN            HAE+L I     +         + + V+LE
Sbjct: 44  VGAILFDKNDNILIEAGNEMFLEGFHSA-RHAEMLVIDRFELQYPEYGDRSGLTIMVSLE 102

Query: 82  PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
           PC MC   + LA I  + Y  ++  GG  E   +
Sbjct: 103 PCPMCLTRLLLAGIGEIVYLVNDDVGGMAERIDR 136


>gi|257126237|ref|YP_003164351.1| CMP/dCMP deaminase zinc-binding [Leptotrichia buccalis C-1013-b]
 gi|257050176|gb|ACV39360.1| CMP/dCMP deaminase zinc-binding [Leptotrichia buccalis C-1013-b]
          Length = 161

 Score = 63.8 bits (155), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 30/122 (24%), Positives = 43/122 (35%), Gaps = 31/122 (25%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNK-IISRAGNR-NRELKDVTA--- 52
           +     FM  A      +      P   VGA  +  +K II    N       D +    
Sbjct: 8   LSWDEYFMGIAFLSGMRSKD----PSTQVGACIIDEDKKIIGIGYNGFPMGSSDDSMPWD 63

Query: 53  --------------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98
                         HAE+ AI     + S + L    +YVT  PC  CA AI  + I+++
Sbjct: 64  KDGEFLDTKYPYVVHAELNAI-----LNSIKSLKNSTIYVTHFPCNECAKAIVQSGIKKV 118

Query: 99  YY 100
            Y
Sbjct: 119 IY 120


>gi|195584645|ref|XP_002082115.1| GD11395 [Drosophila simulans]
 gi|194194124|gb|EDX07700.1| GD11395 [Drosophila simulans]
          Length = 360

 Score = 63.8 bits (155), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 17/77 (22%), Positives = 36/77 (46%), Gaps = 3/77 (3%)

Query: 55  EILAIRMG--CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN 112
           E+ A +           +    D+Y+  EPC MC+ A+  +R +R+++   N   G +  
Sbjct: 274 EVNADQGADNLAKFGPYLCTGYDIYLLQEPCLMCSMALVHSRAKRVFF-VKNSDNGALAT 332

Query: 113 GTQFYTLATCHHSPEIY 129
             Q +++   +H  E++
Sbjct: 333 RFQLHSVRELNHHYEVF 349


>gi|57642192|ref|YP_184670.1| deoxycytidylate deaminase [Thermococcus kodakarensis KOD1]
 gi|57160516|dbj|BAD86446.1| deoxycytidylate deaminase [Thermococcus kodakarensis KOD1]
          Length = 178

 Score = 63.8 bits (155), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 32/117 (27%), Positives = 38/117 (32%), Gaps = 24/117 (20%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNR--------------- 43
            K   FM  A   +  A      P   VGAVAV +  I++   N                
Sbjct: 22  TKDEYFMLIAKLVSLRATC----PRLRVGAVAVKDGYILATGYNGAPRGMDHCIDVGCLI 77

Query: 44  NRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
                    HAE   I M  R      L    LYVT  PC  C   +  A IR + Y
Sbjct: 78  VDGHCHRAVHAEQNVIAMAARKGIS--LEGATLYVTHFPCDTCFKLLINAGIREIVY 132


>gi|289615498|emb|CBI57739.1| unnamed protein product [Sordaria macrospora]
          Length = 363

 Score = 63.8 bits (155), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 29/122 (23%), Positives = 41/122 (33%), Gaps = 31/122 (25%)

Query: 4   GNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGN---------------RNRE 46
            + FM+ A   AQ +    R    VG V V + ++IS   N               R  E
Sbjct: 230 DSYFMALASLAAQRSNCMKRR---VGCVVVRDKRVISTGYNGTPRGLINCGEGGCGRCNE 286

Query: 47  LKDV--------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98
            +            HAE  A+    R   +E      LY    PC  C+  I+   I  +
Sbjct: 287 GQGSGQGLSTCLCMHAEENALLEAGRERVRE---GAVLYCDTCPCLTCSIKIAQVGISEV 343

Query: 99  YY 100
            Y
Sbjct: 344 VY 345


>gi|238922541|ref|YP_002936054.1| dCMP deaminase [Eubacterium rectale ATCC 33656]
 gi|238874213|gb|ACR73920.1| dCMP deaminase [Eubacterium rectale ATCC 33656]
          Length = 161

 Score = 63.8 bits (155), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 33/134 (24%), Positives = 46/134 (34%), Gaps = 30/134 (22%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLN-NKIISRAGN-------------R 43
           +     FM  A+     +      P   VGA  V   +KI+S   N              
Sbjct: 11  ISWDEYFMGIAMLSGMRSKD----PNTQVGACIVDPEHKILSMGYNGFPLGCSDDEFTWA 66

Query: 44  NRELKDV---TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
                +    + H+E+ AI           L    +YVTL PC  CA AI  + IR + Y
Sbjct: 67  REGEDNKYFYSTHSELNAILN----YRGGSLEGATIYVTLFPCNECAKAIIQSGIREVVY 122

Query: 101 GASNPKGGGIENGT 114
                K  G  + T
Sbjct: 123 DC--DKYEGTASVT 134


>gi|260683514|ref|YP_003214799.1| putative phage-related deoxycytidylate deaminase [Clostridium
           difficile CD196]
 gi|260687174|ref|YP_003218308.1| putative phage-related deoxycytidylate deaminase (putative late
           competence protein) [Clostridium difficile R20291]
 gi|260209677|emb|CBA63397.1| putative phage-related deoxycytidylate deaminase (putative late
           competence protein) [Clostridium difficile CD196]
 gi|260213191|emb|CBE04662.1| putative phage-related deoxycytidylate deaminase (putative late
           competence protein) [Clostridium difficile R20291]
          Length = 150

 Score = 63.8 bits (155), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 30/112 (26%), Positives = 44/112 (39%), Gaps = 19/112 (16%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNR-----------ELKDV-- 50
             FM      A+         VGA+ V   N+I+S   N +            E++D   
Sbjct: 18  EYFMRLCETVAERGTCDRAY-VGAIIVNSENRIVSTGYNGSISGDKHCSEVGHEMRDGHC 76

Query: 51  --TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
             T HAE  A+    +      + +  +YVT  PC  C  AI  A I+ +YY
Sbjct: 77  IRTIHAEQNALYYCAKEGIS--VKDCSIYVTHFPCLNCTKAIIQAGIKHIYY 126


>gi|126730233|ref|ZP_01746044.1| riboflavin biosynthesis protein RibD [Sagittula stellata E-37]
 gi|126708966|gb|EBA08021.1| riboflavin biosynthesis protein RibD [Sagittula stellata E-37]
          Length = 89

 Score = 63.8 bits (155), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 22/95 (23%), Positives = 32/95 (33%), Gaps = 17/95 (17%)

Query: 3  KGNVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
              FM+ AL   +    +      VG + V   +++ R   +         HAE  A+ 
Sbjct: 4  SDARFMAQALALGRRGMGQTWPNPAVGCLIVRKGRVVGRGWTQP----SGRPHAETQALA 59

Query: 61 MGCRILSQEILPEVDLYVTLEPC------TMCAAA 89
          M              +YVTLEPC        C  A
Sbjct: 60 MAGDAA-----RGATVYVTLEPCAHHGKTPPCTDA 89


>gi|72161281|ref|YP_288938.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Thermobifida
           fusca YX]
 gi|71915013|gb|AAZ54915.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Thermobifida
           fusca YX]
          Length = 153

 Score = 63.8 bits (155), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 25/104 (24%), Positives = 40/104 (38%), Gaps = 13/104 (12%)

Query: 26  VGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84
           VGA+ V  +  +++   +R     D   HAE +A+R          L    LY +LEPC+
Sbjct: 31  VGALIVAADGTVLADGYSRR---DDPHDHAEEVALRAVAAE--DPRLAAATLYSSLEPCS 85

Query: 85  M-------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
                   C + I    I R+ +    P+      G +    A 
Sbjct: 86  TRASRPRSCTSLILDTPIPRIVFAWREPELFVDCRGAELLRAAG 129


>gi|127513983|ref|YP_001095180.1| CMP/dCMP deaminase, zinc-binding [Shewanella loihica PV-4]
 gi|126639278|gb|ABO24921.1| CMP/dCMP deaminase, zinc-binding [Shewanella loihica PV-4]
          Length = 149

 Score = 63.8 bits (155), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 25/86 (29%), Positives = 33/86 (38%), Gaps = 18/86 (20%)

Query: 26  VGAVAVLNNKIISRAGN-------------RNRELKDVTAHAEILAIRMGCRILSQEILP 72
           VGAV   NN+I+S   N                     T HAE  AI    R      L 
Sbjct: 27  VGAVITENNRIVSLGFNGYPHGISDSAETDNREMKLLKTLHAEENAILYAKR-----DLS 81

Query: 73  EVDLYVTLEPCTMCAAAISLARIRRL 98
             +++VT  PC  CAA I    ++ +
Sbjct: 82  SCEIWVTHFPCPNCAAKIIQTGLKVV 107


>gi|317495073|ref|ZP_07953445.1| ComE operon protein 2 [Gemella moribillum M424]
 gi|316914845|gb|EFV36319.1| ComE operon protein 2 [Gemella moribillum M424]
          Length = 154

 Score = 63.8 bits (155), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 27/116 (23%), Positives = 40/116 (34%), Gaps = 18/116 (15%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNR---------------NR 45
           +     FM+ +   +  +     + VGA  V + +I+S   N                  
Sbjct: 4   ISWDEYFMAQSHLLSLRSTCSR-LSVGATIVKDKRIVSGGYNGSIKGDEHCIDVGCKVVE 62

Query: 46  ELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
                T HAEI AI    R           +YVT  PC  C  +I  A I+ + Y 
Sbjct: 63  GHCVRTIHAEINAILQCSRFGVGT--EGATIYVTHFPCLNCTKSIIQAGIKEICYA 116


>gi|256391606|ref|YP_003113170.1| CMP/dCMP deaminase zinc-binding [Catenulispora acidiphila DSM
           44928]
 gi|256357832|gb|ACU71329.1| CMP/dCMP deaminase zinc-binding [Catenulispora acidiphila DSM
           44928]
          Length = 164

 Score = 63.8 bits (155), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 26/117 (22%), Positives = 47/117 (40%), Gaps = 24/117 (20%)

Query: 3   KGNVFMSCALEEAQN------AALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAE 55
           +   ++S A++ A        A       VGA+ V  +++ ++R  +R+ +      HAE
Sbjct: 17  EDREWLSTAVDLAWRCPPAPGAFN-----VGALIVDADDRELARGWSRDTDEH---VHAE 68

Query: 56  ILAIRMGCRILSQEILPEVDLYVTLEPC-------TMCAAAISLARIRRLYYGASNP 105
             A+       +   L    +Y +LEPC         C   I  + IRR+ +    P
Sbjct: 69  ESALNTLG--PNHPRLSGATVYSSLEPCSIRKSRPLTCTQLIIASGIRRVVFAWREP 123


>gi|164424748|ref|XP_960920.2| hypothetical protein NCU06673 [Neurospora crassa OR74A]
 gi|157070644|gb|EAA31684.2| hypothetical protein NCU06673 [Neurospora crassa OR74A]
          Length = 404

 Score = 63.8 bits (155), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 29/122 (23%), Positives = 41/122 (33%), Gaps = 31/122 (25%)

Query: 4   GNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGN---------------RNRE 46
            + FM+ A   AQ +    R    VG V V + ++IS   N               R  E
Sbjct: 248 DSYFMALASLAAQRSNCMKRR---VGCVVVRDKRVISTGYNGTPRGLINCGEGGCGRCNE 304

Query: 47  LKDV--------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98
            +            HAE  A+    R   +E      LY    PC  C+  I+   I  +
Sbjct: 305 GQGSGQGLSTCLCMHAEENALLEAGRERVRE---GAVLYCDTCPCLTCSIKIAQVGISEV 361

Query: 99  YY 100
            Y
Sbjct: 362 VY 363


>gi|168333891|ref|ZP_02692129.1| CMP/dCMP deaminase, zinc-binding protein [Epulopiscium sp. 'N.t.
           morphotype B']
          Length = 158

 Score = 63.8 bits (155), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 29/121 (23%), Positives = 48/121 (39%), Gaps = 28/121 (23%)

Query: 4   GNVFMSCA-LEEAQNAALRNEIPVGAVAVLNNKIISRAGN--------------RNRELK 48
              FM  A L + ++   R +  VGAV V + +I+S   N                 +L 
Sbjct: 6   DQYFMDIAHLVKTRSTCTRRQ--VGAVVVKDKQILSTGYNGAPTSCTHCIELGCMRTKLN 63

Query: 49  DVTA---------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLY 99
             +          HAE  AI    +  +   +    +YVT +PC+MCA  +  + I ++ 
Sbjct: 64  IPSGERHELCRALHAEQNAITQAAK--NGTAVAGAVIYVTAQPCSMCAKVLINSGIAKII 121

Query: 100 Y 100
           Y
Sbjct: 122 Y 122


>gi|219110369|ref|XP_002176936.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217411471|gb|EEC51399.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 172

 Score = 63.8 bits (155), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 28/123 (22%), Positives = 46/123 (37%), Gaps = 31/123 (25%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAV-LNNKIISRAGNR------------N 44
           +   + FM+ A   AQ +      P   VGA  V  + +I++   N             +
Sbjct: 6   ISWDDYFMAMAFLTAQRSKD----PNTQVGACIVDRHQRIVALGYNGFPAGASDDVLPWS 61

Query: 45  RELKDVTA-------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRR 97
           R              HAE+ A+   C     + + +  LYV L PC  CA  +  A ++ 
Sbjct: 62  RTAVQPLHRKYHYVCHAEVNAVLNKC----SDNVKDTTLYVALFPCNECAKVLVQAGVKE 117

Query: 98  LYY 100
           + Y
Sbjct: 118 VVY 120


>gi|51246123|ref|YP_066007.1| deoxycytidylate deaminase [Desulfotalea psychrophila LSv54]
 gi|50877160|emb|CAG37000.1| probable deoxycytidylate deaminase [Desulfotalea psychrophila
           LSv54]
          Length = 165

 Score = 63.8 bits (155), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 30/122 (24%), Positives = 42/122 (34%), Gaps = 30/122 (24%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAV-LNNKIISRAGNR------------- 43
           +     FM+ A+  AQ +      P   VGA      NKI+    N              
Sbjct: 7   LSWDEYFMAVAILSAQRSKD----PSTQVGACIANKANKIVGVGYNGFPLGCDDDDLPWG 62

Query: 44  NR----ELKDV-TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98
                 E K     HAE+ A+       S   L +  +YV L PC  C   I  + I+ +
Sbjct: 63  REGDFLETKYPYVCHAELNAVLN----SSSRDLMDCKIYVALFPCNECTKVIIQSGIKEV 118

Query: 99  YY 100
            Y
Sbjct: 119 IY 120


>gi|42524894|ref|NP_970274.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Bdellovibrio bacteriovorus HD100]
 gi|39577104|emb|CAE78333.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Bdellovibrio bacteriovorus HD100]
          Length = 394

 Score = 63.8 bits (155), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 37/163 (22%), Positives = 63/163 (38%), Gaps = 34/163 (20%)

Query: 8   MSCALEEAQNAALRNEI---P-VGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMG 62
           MS A+ EA   A R  +   P VGAV +      +S   +          HAE+ A+   
Sbjct: 22  MSLAISEAYQGAAR--VSPNPLVGAVVLDAQGGFLSAGHHEFYGG----PHAEVNAL--- 72

Query: 63  CRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116
            + LS E L     +VTLEPC        CA  ++   ++++ +G  +P       G + 
Sbjct: 73  -KNLSPEQLKGAHAFVTLEPCAHEGKTPSCAKMMAKLPLKKVTFGLIDPNPLVAGQGAEI 131

Query: 117 YTLATCHHSPEIYP---GI--------SEQRSRQIIQDFFKER 148
              A      E++     +         E+     + +F K++
Sbjct: 132 LRQARI--EAEVFSSANPVLDAKIKTELEEVCEAFLWNFRKKK 172


>gi|325912230|ref|ZP_08174627.1| putative ComE operon protein 2 [Lactobacillus iners UPII 143-D]
 gi|325912505|ref|ZP_08174895.1| putative ComE operon protein 2 [Lactobacillus iners UPII 60-B]
 gi|325475889|gb|EGC79058.1| putative ComE operon protein 2 [Lactobacillus iners UPII 143-D]
 gi|325478178|gb|EGC81300.1| putative ComE operon protein 2 [Lactobacillus iners UPII 60-B]
          Length = 157

 Score = 63.8 bits (155), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 26/111 (23%), Positives = 42/111 (37%), Gaps = 18/111 (16%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRE---LKD------------ 49
             FM  AL  +Q +     + VG+V V + ++I+   N +       D            
Sbjct: 10  QYFMMQALVISQRSTCDRAL-VGSVLVKDKRMIATGYNGSVTGEPHCDDEGHLMIDGHCV 68

Query: 50  VTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
            T H+E+ A+    +           +YVT  PC  C  A+  A I  + Y
Sbjct: 69  RTIHSEMNALIQCAKNGIST--EGCAIYVTHFPCYNCTKALVQAGIVEVNY 117


>gi|309808484|ref|ZP_07702383.1| putative ComE operon protein 2 [Lactobacillus iners LactinV 01V1-a]
 gi|308168312|gb|EFO70431.1| putative ComE operon protein 2 [Lactobacillus iners LactinV 01V1-a]
          Length = 157

 Score = 63.8 bits (155), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 26/111 (23%), Positives = 42/111 (37%), Gaps = 18/111 (16%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRE---LKD------------ 49
             FM  AL  +Q +     + VG+V V + ++I+   N +       D            
Sbjct: 10  QYFMMQALVISQRSTCDRAL-VGSVLVKDKRMIATGYNGSVTGEPHCDDEGHLMVDGHCV 68

Query: 50  VTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
            T H+E+ A+    +           +YVT  PC  C  A+  A I  + Y
Sbjct: 69  RTIHSEMNALIQCAKNGIST--EGCAIYVTHFPCYNCTKALVQAGIVEVNY 117


>gi|126699509|ref|YP_001088406.1| putative phage-related deoxycytidylate deaminase (putative late
           competence protein) [Clostridium difficile 630]
 gi|254975491|ref|ZP_05271963.1| putative phage-related deoxycytidylate deaminase (putative late
           competence protein) [Clostridium difficile QCD-66c26]
 gi|255092879|ref|ZP_05322357.1| putative phage-related deoxycytidylate deaminase (putative late
           competence protein) [Clostridium difficile CIP 107932]
 gi|255306890|ref|ZP_05351061.1| putative phage-related deoxycytidylate deaminase (putative late
           competence protein) [Clostridium difficile ATCC 43255]
 gi|255314620|ref|ZP_05356203.1| putative phage-related deoxycytidylate deaminase (putative late
           competence protein) [Clostridium difficile QCD-76w55]
 gi|255517294|ref|ZP_05384970.1| putative phage-related deoxycytidylate deaminase (putative late
           competence protein) [Clostridium difficile QCD-97b34]
 gi|255650401|ref|ZP_05397303.1| putative phage-related deoxycytidylate deaminase (putative late
           competence protein) [Clostridium difficile QCD-37x79]
 gi|306520380|ref|ZP_07406727.1| putative phage-related deoxycytidylate deaminase (putative late
           competence protein) [Clostridium difficile QCD-32g58]
 gi|115250946|emb|CAJ68774.1| putative dCMP deaminase [Clostridium difficile]
          Length = 145

 Score = 63.8 bits (155), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 30/112 (26%), Positives = 44/112 (39%), Gaps = 19/112 (16%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNR-----------ELKDV-- 50
             FM      A+         VGA+ V   N+I+S   N +            E++D   
Sbjct: 13  EYFMRLCETVAERGTCDRAY-VGAIIVNSENRIVSTGYNGSISGDKHCSEVGHEMRDGHC 71

Query: 51  --TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
             T HAE  A+    +      + +  +YVT  PC  C  AI  A I+ +YY
Sbjct: 72  IRTIHAEQNALYYCAKEGIS--VKDCSIYVTHFPCLNCTKAIIQAGIKHIYY 121


>gi|116617577|ref|YP_817948.1| deoxycytidylate deaminase [Leuconostoc mesenteroides subsp.
           mesenteroides ATCC 8293]
 gi|116096424|gb|ABJ61575.1| Deoxycytidylate deaminase [Leuconostoc mesenteroides subsp.
           mesenteroides ATCC 8293]
          Length = 158

 Score = 63.8 bits (155), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 20/90 (22%), Positives = 36/90 (40%), Gaps = 17/90 (18%)

Query: 26  VGAVAVLNNKIISRAGNRNRE-------------LKDVTA--HAEILAIRMGCRILSQEI 70
           VGA+ V +++II+   N +                       HAE  A+    ++     
Sbjct: 30  VGAIIVRDHRIIASGYNGSVSGTPHCTEVGDLMVDGHCIRAVHAEQNALMQAAKMGIT-- 87

Query: 71  LPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
           +   ++YVT  PC  C   +  A I ++Y+
Sbjct: 88  IDGSEVYVTDVPCVQCTKLLLQAGISKIYF 117


>gi|190407280|gb|EDV10547.1| DRAP deaminase [Saccharomyces cerevisiae RM11-1a]
          Length = 591

 Score = 63.4 bits (154), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 32/155 (20%), Positives = 57/155 (36%), Gaps = 28/155 (18%)

Query: 1   MKKGNVFMSCALEEA------QNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHA 54
           ++    +M  A++EA      + A       VGAV V   ++++   +R         HA
Sbjct: 432 LEPHRRYMEMAVKEADKCGPTKTAFS-----VGAVLVHGTQVLATGYSRQLPGN---THA 483

Query: 55  EILAIRMGCRI---LSQEILPEVDLYVTLEPCT-------MCAAAISLAR--IRRLYYGA 102
           E  A+    ++       +     LY T+EPC+        C   I   +  I  ++ G 
Sbjct: 484 EQCALIKYSQLHPNCPTIVPMGTVLYTTMEPCSFRLSGNEPCCDRILATQGAIGTVFVGV 543

Query: 103 SNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRS 137
             P    ++N T    L +   +    PG  E+  
Sbjct: 544 MEPDT-FVKNNTSLNKLESHGVNYIQIPGY-EEEC 576


>gi|145499399|ref|XP_001435685.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124402819|emb|CAK68288.1| unnamed protein product [Paramecium tetraurelia]
          Length = 256

 Score = 63.4 bits (154), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 23/114 (20%), Positives = 42/114 (36%), Gaps = 14/114 (12%)

Query: 28  AVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQ-----------EILPEVD 75
            +    +N I+  A   +    +   H  ++A+                        E+ 
Sbjct: 142 CILYDEDNTIVIEA--EDETHINNARHCVMVAMEKLAEHNKNENQQKHFHDLQYYAKEMT 199

Query: 76  LYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIY 129
           L +  EPC MCA A+  +RI+ +YY       GG+ +  Q   L   +H   ++
Sbjct: 200 LVIYFEPCIMCAMALVHSRIKEVYYYQKRVVDGGLNDQLQLNNLKQLNHKYLVF 253


>gi|296450850|ref|ZP_06892600.1| cytidine/deoxycytidylate deaminase [Clostridium difficile NAP08]
 gi|296879147|ref|ZP_06903142.1| cytidine/deoxycytidylate deaminase [Clostridium difficile NAP07]
 gi|296260321|gb|EFH07166.1| cytidine/deoxycytidylate deaminase [Clostridium difficile NAP08]
 gi|296429690|gb|EFH15542.1| cytidine/deoxycytidylate deaminase [Clostridium difficile NAP07]
          Length = 150

 Score = 63.4 bits (154), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 29/112 (25%), Positives = 44/112 (39%), Gaps = 19/112 (16%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNR-----------ELKDV-- 50
             FM      A+         VGA+ V   N+I+S   N +            E++D   
Sbjct: 18  EYFMRLCETVAERGTCDRAY-VGAIIVNSENRIVSTGYNGSISGDKHCSEVGHEMRDGHC 76

Query: 51  --TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
             T HAE  A+    +      + +  +YVT  PC  C  AI  + I+ +YY
Sbjct: 77  IRTIHAEQNALYYCAKEGIS--VKDCSIYVTHFPCLNCTKAIIQSGIKHIYY 126


>gi|217076035|gb|ACJ86376.1| 5-amino-6-(5-phosphoribosylamino) uracil reductase [Leuconostoc
           mesenteroides]
          Length = 122

 Score = 63.4 bits (154), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 32/125 (25%), Positives = 47/125 (37%), Gaps = 16/125 (12%)

Query: 3   KGNVFMSCALEEAQNA--ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
               +M  A +EA  A      E P VGAV V + ++I+   +         AHAEI A 
Sbjct: 2   NDLTWMYLAADEAIRAMPYQTFENPRVGAVLVKDGQVITTPYHEKFGE----AHAEINAF 57

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLA------RIRRLYYGASNPKGGGIENG 113
               R+ ++       LYVT EP +      S A        +R+  G  +P       G
Sbjct: 58  N---RVKNKTEFLGATLYVTFEPNSPQGKVGSWAVQIQNWGQKRVVVGKIDPNPSTNGKG 114

Query: 114 TQFYT 118
            +   
Sbjct: 115 IKMLR 119


>gi|290558972|gb|EFD92355.1| CMP/dCMP deaminase zinc-binding [Candidatus Parvarchaeum
           acidophilus ARMAN-5]
          Length = 159

 Score = 63.4 bits (154), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 22/97 (22%), Positives = 34/97 (35%), Gaps = 27/97 (27%)

Query: 28  AVAVLNNKIISRAG--------------NRNRELKD-----------VTAHAEILAIRMG 62
            V V  N+I++                 +  R+  D            T HAE  AI   
Sbjct: 30  CVIVKENRILATGYAGSPKGMPHCDDVGHLLRKQYDNETGEITVHCLRTVHAEQNAITQA 89

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLY 99
            +      L +   Y+T+EPC  CA  +    I+R+ 
Sbjct: 90  AKFGVS--LSDSTAYITMEPCFTCAKMLVQVGIKRVV 124


>gi|302529252|ref|ZP_07281594.1| bifunctional enzyme deaminase/reductase [Streptomyces sp. AA4]
 gi|302438147|gb|EFL09963.1| bifunctional enzyme deaminase/reductase [Streptomyces sp. AA4]
          Length = 371

 Score = 63.4 bits (154), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 24/112 (21%), Positives = 40/112 (35%), Gaps = 25/112 (22%)

Query: 8   MSCALEEAQNAALRNEIP------VGAVA-VLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           +  A++ A      +E P      VGAV  + +  +++   +      D   HAE  A+ 
Sbjct: 230 LRQAIDLA------DECPPSSTFRVGAVVGLPDGTVLATGHS---GEGDPHNHAEESAL- 279

Query: 61  MGCRILSQEILPEVDLYVTLEPCT-------MCAAAISLARIRRLYYGASNP 105
                     L +  +Y +LEPC+        C   I    I R+      P
Sbjct: 280 -AKLDPHDPRLADATMYSSLEPCSDRASHPKSCTQLILETAIPRVVMAWREP 330


>gi|323331668|gb|EGA73082.1| Rib2p [Saccharomyces cerevisiae AWRI796]
 gi|323335647|gb|EGA76930.1| Rib2p [Saccharomyces cerevisiae Vin13]
 gi|323346638|gb|EGA80923.1| Rib2p [Saccharomyces cerevisiae Lalvin QA23]
 gi|323352328|gb|EGA84863.1| Rib2p [Saccharomyces cerevisiae VL3]
          Length = 591

 Score = 63.4 bits (154), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 32/155 (20%), Positives = 57/155 (36%), Gaps = 28/155 (18%)

Query: 1   MKKGNVFMSCALEEA------QNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHA 54
           ++    +M  A++EA      + A       VGAV V   ++++   +R         HA
Sbjct: 432 LEPHRRYMEMAVKEADKCGPTKTAFS-----VGAVLVHGTQVLATGYSRELPGN---THA 483

Query: 55  EILAIRMGCRI---LSQEILPEVDLYVTLEPCT-------MCAAAISLAR--IRRLYYGA 102
           E  A+    ++       +     LY T+EPC+        C   I   +  I  ++ G 
Sbjct: 484 EQCALIKYSQLHPNCPTIVPMGTVLYTTMEPCSFRLSGNEPCCDRILATQGAIGTVFVGV 543

Query: 103 SNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRS 137
             P    ++N T    L +   +    PG  E+  
Sbjct: 544 MEPDT-FVKNNTSLNKLESHGVNYIQIPGY-EEEC 576


>gi|260587372|ref|ZP_05853285.1| putative deoxycytidylate deaminase [Blautia hansenii DSM 20583]
 gi|331083672|ref|ZP_08332783.1| hypothetical protein HMPREF0992_01707 [Lachnospiraceae bacterium
           6_1_63FAA]
 gi|260542239|gb|EEX22808.1| putative deoxycytidylate deaminase [Blautia hansenii DSM 20583]
 gi|330403883|gb|EGG83435.1| hypothetical protein HMPREF0992_01707 [Lachnospiraceae bacterium
           6_1_63FAA]
          Length = 161

 Score = 63.4 bits (154), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 35/125 (28%), Positives = 48/125 (38%), Gaps = 30/125 (24%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVL-NNKIISRAGN-------------- 42
           +     FM  A    + + +R++ P   VGA  V  +NKI+S   N              
Sbjct: 9   ISWDEYFMGVA----KLSGMRSKDPNSQVGACIVSQDNKILSMGYNGFPMGCSDDEFPWA 64

Query: 43  RNRELKDV----TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98
           R  E  D       H+E+ AI           L    LYV+L PC  CA AI  A I+ +
Sbjct: 65  REGEELDTKYFYVTHSELNAILN----YRGGSLEGAKLYVSLFPCNECAKAIIQAGIKTI 120

Query: 99  YYGAS 103
            Y   
Sbjct: 121 VYECD 125


>gi|207341390|gb|EDZ69458.1| YOL066Cp-like protein [Saccharomyces cerevisiae AWRI1631]
          Length = 589

 Score = 63.4 bits (154), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 32/155 (20%), Positives = 57/155 (36%), Gaps = 28/155 (18%)

Query: 1   MKKGNVFMSCALEEA------QNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHA 54
           ++    +M  A++EA      + A       VGAV V   ++++   +R         HA
Sbjct: 432 LEPHRRYMEMAVKEADKCGPTKTAFS-----VGAVLVHGTQVLATGYSRELPGN---THA 483

Query: 55  EILAIRMGCRI---LSQEILPEVDLYVTLEPCT-------MCAAAISLAR--IRRLYYGA 102
           E  A+    ++       +     LY T+EPC+        C   I   +  I  ++ G 
Sbjct: 484 EQCALIKYSQLHPNCPTIVPMGTVLYTTMEPCSFRLSGNEPCCDRILATQGAIGTVFVGV 543

Query: 103 SNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRS 137
             P    ++N T    L +   +    PG  E+  
Sbjct: 544 MEPDT-FVKNNTSLNKLESHGVNYIQIPGY-EEEC 576


>gi|151945568|gb|EDN63809.1| DRAP deaminase [Saccharomyces cerevisiae YJM789]
 gi|256273956|gb|EEU08875.1| Rib2p [Saccharomyces cerevisiae JAY291]
 gi|323303146|gb|EGA56948.1| Rib2p [Saccharomyces cerevisiae FostersB]
 gi|323307078|gb|EGA60361.1| Rib2p [Saccharomyces cerevisiae FostersO]
          Length = 591

 Score = 63.4 bits (154), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 32/155 (20%), Positives = 57/155 (36%), Gaps = 28/155 (18%)

Query: 1   MKKGNVFMSCALEEA------QNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHA 54
           ++    +M  A++EA      + A       VGAV V   ++++   +R         HA
Sbjct: 432 LEPHRRYMEMAVKEADKCGPTKTAFS-----VGAVLVHGTQVLATGYSRELPGN---THA 483

Query: 55  EILAIRMGCRI---LSQEILPEVDLYVTLEPCT-------MCAAAISLAR--IRRLYYGA 102
           E  A+    ++       +     LY T+EPC+        C   I   +  I  ++ G 
Sbjct: 484 EQCALIKYSQLHPNCPTIVPMGTVLYTTMEPCSFRLSGNEPCCDRILATQGAIGTVFVGV 543

Query: 103 SNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRS 137
             P    ++N T    L +   +    PG  E+  
Sbjct: 544 MEPDT-FVKNNTSLNKLESHGVNYIQIPGY-EEEC 576


>gi|6324506|ref|NP_014575.1| Rib2p [Saccharomyces cerevisiae S288c]
 gi|2501674|sp|Q12362|RIB2_YEAST RecName: Full=Bifunctional protein RIB2; Includes: RecName:
           Full=tRNA pseudouridine synthase 8, cytoplasmic;
           AltName: Full=tRNA pseudouridylate synthase 8; AltName:
           Full=tRNA-uridine isomerase 8; Includes: RecName:
           Full=Diaminohydroxyphosphoribosylaminopyrimidine
           deaminase; Short=DRAP deaminase; AltName:
           Full=Riboflavin-specific deaminase
 gi|642221|emb|CAA79742.1| DRAP deaminase [Saccharomyces cerevisiae]
 gi|1419887|emb|CAA99076.1| RIB2 [Saccharomyces cerevisiae]
 gi|285814824|tpg|DAA10717.1| TPA: Rib2p [Saccharomyces cerevisiae S288c]
          Length = 591

 Score = 63.4 bits (154), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 32/155 (20%), Positives = 57/155 (36%), Gaps = 28/155 (18%)

Query: 1   MKKGNVFMSCALEEA------QNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHA 54
           ++    +M  A++EA      + A       VGAV V   ++++   +R         HA
Sbjct: 432 LEPHRRYMEMAVKEAGKCGPTKTAFS-----VGAVLVHGTQVLATGYSRELPGN---THA 483

Query: 55  EILAIRMGCRI---LSQEILPEVDLYVTLEPCT-------MCAAAISLAR--IRRLYYGA 102
           E  A+    ++       +     LY T+EPC+        C   I   +  I  ++ G 
Sbjct: 484 EQCALIKYSQLHPNCPTIVPMGTVLYTTMEPCSFRLSGNEPCCDRILATQGAIGTVFVGV 543

Query: 103 SNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRS 137
             P    ++N T    L +   +    PG  E+  
Sbjct: 544 MEPDT-FVKNNTSLNKLESHGVNYIQIPGY-EEEC 576


>gi|282598641|ref|YP_003358738.1| gp35 [Mycobacterium phage Peaches]
 gi|255928168|gb|ACU41786.1| gp35 [Mycobacterium phage Peaches]
          Length = 198

 Score = 63.4 bits (154), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 31/133 (23%), Positives = 44/133 (33%), Gaps = 31/133 (23%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGN-----------RNRELKDV-- 50
              F+  A   A+ +       VGAV V + ++ +   N             R   +   
Sbjct: 6   DEYFLGIARAAAERSDCERSK-VGAVVVKDRRVRATGYNGAPAGRPGCGTCPRRTSNARP 64

Query: 51  ---------TA----HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRR 97
                    T     HAE  A+        +E L    LY+T EPC  C+  I  A I R
Sbjct: 65  GVDSYSSGGTRCVAVHAEANAL----LYCDREDLRGASLYITREPCGDCSKLIDAAGIER 120

Query: 98  LYYGASNPKGGGI 110
           + Y     K  G 
Sbjct: 121 VVYPFEWEKPEGC 133


>gi|295837583|ref|ZP_06824516.1| cytidine/deoxycytidylate deaminase, zinc-binding region
           [Streptomyces sp. SPB74]
 gi|197698333|gb|EDY45266.1| cytidine/deoxycytidylate deaminase, zinc-binding region
           [Streptomyces sp. SPB74]
          Length = 160

 Score = 63.4 bits (154), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 23/83 (27%), Positives = 34/83 (40%), Gaps = 2/83 (2%)

Query: 22  NEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80
            + P G+V V    ++ + A N      D T H E    R     L+ E      +  + 
Sbjct: 25  GDEPFGSVLVSGAGEVRAEARNE-AGGGDHTRHPEFALARWAAAHLTPEERARATVCTSG 83

Query: 81  EPCTMCAAAISLARIRRLYYGAS 103
           E C MCAAA     + R+ + AS
Sbjct: 84  EHCPMCAAAHGWTGLGRIVHAAS 106


>gi|255655869|ref|ZP_05401278.1| putative phage-related deoxycytidylate deaminase (putative late
           competence protein) [Clostridium difficile QCD-23m63]
          Length = 145

 Score = 63.4 bits (154), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 29/112 (25%), Positives = 44/112 (39%), Gaps = 19/112 (16%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNR-----------ELKDV-- 50
             FM      A+         VGA+ V   N+I+S   N +            E++D   
Sbjct: 13  EYFMRLCETVAERGTCDRAY-VGAIIVNSENRIVSTGYNGSISGDKHCSEVGHEMRDGHC 71

Query: 51  --TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
             T HAE  A+    +      + +  +YVT  PC  C  AI  + I+ +YY
Sbjct: 72  IRTIHAEQNALYYCAKEGIS--VKDCSIYVTHFPCLNCTKAIIQSGIKHIYY 121


>gi|37651679|ref|NP_932553.1| Cd [Aeromonas phage 44RR2.8t]
 gi|66392000|ref|YP_238925.1| cd dCMP deaminase [Aeromonas phage 31]
 gi|34732979|gb|AAQ81516.1| dCMP deaminase [Aeromonas phage 44RR2.8t]
 gi|62114837|gb|AAX63685.1| cd dCMP deaminase [Aeromonas phage 31]
          Length = 172

 Score = 63.4 bits (154), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 26/109 (23%), Positives = 41/109 (37%), Gaps = 36/109 (33%)

Query: 26  VGAVAVLNNKIISRAGNRN----RELKDVTA----------------------------- 52
           VGA+   + +IIS   N       E  D  A                             
Sbjct: 24  VGAIITKDGRIISTGYNGTPAGGHENCDDHAKAAGWLDPETGKLKAMYRQAHNEWSSCNE 83

Query: 53  -HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
            HAE+ AI    +      +   ++YVT+ PC  CA AI+ + I++++Y
Sbjct: 84  IHAELNAILYAAKSGQS--IDGAEMYVTVSPCRECAKAIAQSGIKKVFY 130


>gi|77463964|ref|YP_353468.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Rhodobacter sphaeroides 2.4.1]
 gi|77388382|gb|ABA79567.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Rhodobacter sphaeroides 2.4.1]
          Length = 356

 Score = 63.4 bits (154), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 29/139 (20%), Positives = 42/139 (30%), Gaps = 21/139 (15%)

Query: 8   MSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M+ AL        R      VG V V   +++ R             HAE +        
Sbjct: 1   MAHALRLGARGLGRTWPNPAVGCVIVKAGRVVGRGWTCPGGR----PHAEPV-----ALA 51

Query: 66  LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
            +         YVTLEPC        CA A+  A + R+     +P       G      
Sbjct: 52  QAGAAALGATAYVTLEPCSHHGRTPPCAEALIAAGLARVVTATGDPDPRVSGRGHAMLRE 111

Query: 120 ATCHHSPEIYPGISEQRSR 138
           A       +   + E  +R
Sbjct: 112 AG----IAVTERVLEAEAR 126


>gi|159464651|ref|XP_001690555.1| hypothetical protein CHLREDRAFT_144229 [Chlamydomonas reinhardtii]
 gi|158280055|gb|EDP05814.1| predicted protein [Chlamydomonas reinhardtii]
          Length = 420

 Score = 63.4 bits (154), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 15/58 (25%), Positives = 33/58 (56%)

Query: 72  PEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIY 129
              D+++  EPC MCA  +  +R++R+ Y  S+P+ G +    + +   + +H+ E++
Sbjct: 344 TGYDIFLVREPCIMCAMGLVHSRVQRVIYCQSDPQHGALGGRQRLHACKSLNHNYEVF 401


>gi|323702624|ref|ZP_08114286.1| CMP/dCMP deaminase zinc-binding protein [Desulfotomaculum
           nigrificans DSM 574]
 gi|323532443|gb|EGB22320.1| CMP/dCMP deaminase zinc-binding protein [Desulfotomaculum
           nigrificans DSM 574]
          Length = 149

 Score = 63.4 bits (154), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 25/128 (19%), Positives = 44/128 (34%), Gaps = 30/128 (23%)

Query: 4   GNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGN--------------RNREL 47
              FM      A  +    R    VGAV + + +I++   N                 ++
Sbjct: 6   DEYFMEITRVVATRSTCLRRK---VGAVIIKDKRILTTGYNGAPAGLAHCLEIGCLREQM 62

Query: 48  KDVTA---------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98
              +          HAE  A+      +    +    +YVT +PC +CA  I  A I+++
Sbjct: 63  GIPSGQRHELCRGLHAEQNALLQAA--VHGIAIQGSTIYVTHQPCVLCAKMIVNAGIKKV 120

Query: 99  YYGASNPK 106
            +    P 
Sbjct: 121 VFAGDYPD 128


>gi|89901442|ref|YP_523913.1| riboflavin biosynthesis protein RibD [Rhodoferax ferrireducens
           T118]
 gi|89346179|gb|ABD70382.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Rhodoferax ferrireducens T118]
          Length = 377

 Score = 63.4 bits (154), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 31/131 (23%), Positives = 50/131 (38%), Gaps = 17/131 (12%)

Query: 26  VGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84
           VG V        + +   +        AHAEI+A+R      +   +     YVTLEPC+
Sbjct: 29  VGCVMTDCRENTLGQGHTQRTGG----AHAEIVALRDAKARGNS--VVGATAYVTLEPCS 82

Query: 85  M------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYP--GISEQR 136
                  C  A+  A I+++    ++P    + +G  F  L       E+ P        
Sbjct: 83  HHGRTGPCCDALIAAGIKKVVASIADPNP--LVSGQGFERLRAAGVEVEVMPADDPLAIA 140

Query: 137 SRQIIQDFFKE 147
           SR++   FF  
Sbjct: 141 SRELNIGFFSR 151


>gi|313157603|gb|EFR57018.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Alistipes sp. HGB5]
          Length = 145

 Score = 63.4 bits (154), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 24/87 (27%), Positives = 32/87 (36%), Gaps = 14/87 (16%)

Query: 26  VGAVAVLNNKIISRAGNRN-----------RELKDV-TAHAEILAIRMGCRILSQEILPE 73
           VGA+ V +  IIS   N                      HAE  AI    +  +      
Sbjct: 33  VGALIVKDKMIISDGYNGTPSGFENICEDENGHTKPYVLHAEANAITKVAKSANNCD--G 90

Query: 74  VDLYVTLEPCTMCAAAISLARIRRLYY 100
             LY+T  PC  C+  I  A I+R+ Y
Sbjct: 91  STLYITAAPCIECSKLIIQAGIKRVVY 117


>gi|148912877|ref|YP_001293456.1| hypothetical protein ORF049 [Pseudomonas phage 73]
          Length = 155

 Score = 63.4 bits (154), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 33/107 (30%), Positives = 44/107 (41%), Gaps = 22/107 (20%)

Query: 12  LEEAQNAALRNEIP---VGAVAVLNNKIISR-AGN--------------RNRELKDVTAH 53
           +E A++ A  ++ P   +GA  V  N+ I+    N                 E   V  H
Sbjct: 19  IELAEHVAGWSKGPRKRIGAAIVRPNRSIASLGYNGPPRGFDDAVFLNMTRDEQHAVVIH 78

Query: 54  AEILAIRMGCRILSQEILPEVDLYVT-LEPCTMCAAAISLARIRRLY 99
           AE  AIR        E L    LYV+ L PC +CA  I  A IRR+ 
Sbjct: 79  AEDNAIRQAA---PGEDLSACTLYVSPLFPCAICADRIVRAGIRRVV 122


>gi|227551296|ref|ZP_03981345.1| competence protein ComEB [Enterococcus faecium TX1330]
 gi|257887587|ref|ZP_05667240.1| cytidine/deoxycytidylate deaminase [Enterococcus faecium 1,141,733]
 gi|257896083|ref|ZP_05675736.1| cytidine/deoxycytidylate deaminase [Enterococcus faecium Com12]
 gi|227179576|gb|EEI60548.1| competence protein ComEB [Enterococcus faecium TX1330]
 gi|257823641|gb|EEV50573.1| cytidine/deoxycytidylate deaminase [Enterococcus faecium 1,141,733]
 gi|257832648|gb|EEV59069.1| cytidine/deoxycytidylate deaminase [Enterococcus faecium Com12]
          Length = 179

 Score = 63.4 bits (154), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 28/113 (24%), Positives = 42/113 (37%), Gaps = 20/113 (17%)

Query: 4   GNVFMSCALEEAQNAA-LRNEIPVGAVAVLNNKIISRAGNR---------------NREL 47
              FM+ A+  +  +   R E  VGA  V   +II+   N                    
Sbjct: 28  DQYFMAQAVLLSLRSTCTRLE--VGATLVREKRIIAGGYNGAVSGDVHCIDEGCYIVDGH 85

Query: 48  KDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
              T HAE+ A+   C  L        ++YVT  PC  C  A+  A ++ + Y
Sbjct: 86  CLRTIHAEMNALLQ-CAKLGIPT-EGSEIYVTHFPCLACTKALLQAGVKGINY 136


>gi|319937282|ref|ZP_08011689.1| deoxycytidylate deaminase [Coprobacillus sp. 29_1]
 gi|319807648|gb|EFW04241.1| deoxycytidylate deaminase [Coprobacillus sp. 29_1]
          Length = 154

 Score = 63.4 bits (154), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 31/129 (24%), Positives = 45/129 (34%), Gaps = 34/129 (26%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAV-LNNKIISRAGNR------------N 44
           +     FM  A   A  +      P   VGA  V   +KI+    N              
Sbjct: 5   ISWDQYFMGVAKLSAYRSKD----PNTQVGACIVTPEHKIVGVGYNGLPWGCEDDEFPWA 60

Query: 45  RELKDV-------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRR 97
               D+         HAE+ AI     + S + L    +YV+L PC  C  AI  + I+ 
Sbjct: 61  NREGDMYDTKYPYVVHAELNAI-----LNSIQKLVGCRIYVSLFPCHECVKAIIQSGIKE 115

Query: 98  LYYGASNPK 106
           + Y   + K
Sbjct: 116 IVY--EDDK 122


>gi|257898719|ref|ZP_05678372.1| cytidine/deoxycytidylate deaminase [Enterococcus faecium Com15]
 gi|293571938|ref|ZP_06682952.1| ComE operon protein 2 [Enterococcus faecium E980]
 gi|257836631|gb|EEV61705.1| cytidine/deoxycytidylate deaminase [Enterococcus faecium Com15]
 gi|291607956|gb|EFF37264.1| ComE operon protein 2 [Enterococcus faecium E980]
          Length = 179

 Score = 63.4 bits (154), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 28/113 (24%), Positives = 42/113 (37%), Gaps = 20/113 (17%)

Query: 4   GNVFMSCALEEAQNAA-LRNEIPVGAVAVLNNKIISRAGNR---------------NREL 47
              FM+ A+  +  +   R E  VGA  V   +II+   N                    
Sbjct: 28  DQYFMAQAVLLSLRSTCTRLE--VGATLVREKRIIAGGYNGAVSGDVHCIDEGCYVVDGH 85

Query: 48  KDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
              T HAE+ A+   C  L        ++YVT  PC  C  A+  A ++ + Y
Sbjct: 86  CLRTIHAEMNALLQ-CAKLGIPT-EGSEIYVTHFPCLACTKALLQAGVKGINY 136


>gi|83311796|ref|YP_422060.1| deoxycytidylate deaminase [Magnetospirillum magneticum AMB-1]
 gi|82946637|dbj|BAE51501.1| Deoxycytidylate deaminase [Magnetospirillum magneticum AMB-1]
          Length = 140

 Score = 63.4 bits (154), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 30/118 (25%), Positives = 47/118 (39%), Gaps = 23/118 (19%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAV-LNNKIISRAGN--------RNRELK 48
           M   + FM  A   A  +      P   VGAVAV  + +I +   N        R   ++
Sbjct: 3   MAWYDYFMGFAKHAASKSKD----PSTQVGAVAVGPDGEIRATGYNGLPRGVEDRPERME 58

Query: 49  DV-----TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
                  T+HAE   +    R+     L    +YVT  PC+ CA ++  A +  ++ G
Sbjct: 59  RPAKYLWTSHAEENLVAHAARVGVS--LKGCTVYVTHYPCSRCARSLIQAGVAEIHVG 114


>gi|303233053|ref|ZP_07319728.1| dCMP deaminase family protein [Atopobium vaginae PB189-T1-4]
 gi|302480828|gb|EFL43913.1| dCMP deaminase family protein [Atopobium vaginae PB189-T1-4]
          Length = 161

 Score = 63.4 bits (154), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 28/123 (22%), Positives = 41/123 (33%), Gaps = 30/123 (24%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVL-NNKIISRAGNRN------------ 44
           +     FM  A+  AQ +      P   VGA     N++I+S   N              
Sbjct: 9   ISWDEFFMRVAMIAAQRSKD----PHTQVGACLADTNDRILSVGYNGTPSGINDDEFPWG 64

Query: 45  ------RELKDVTAHAEILAIRMGCRILSQ-EILPEVDLYVTLEPCTMCAAAISLARIRR 97
                  +  +   HAE  A+          + +     YVTL PC  CA  +  A I  
Sbjct: 65  TSDDPLYDKHNFVIHAEANAL---LNYRGTLKDMQNATAYVTLFPCQECAKMLVQAGIGE 121

Query: 98  LYY 100
           + Y
Sbjct: 122 VIY 124


>gi|281357825|ref|ZP_06244311.1| dCMP deaminase [Victivallis vadensis ATCC BAA-548]
 gi|281315772|gb|EFA99799.1| dCMP deaminase [Victivallis vadensis ATCC BAA-548]
          Length = 159

 Score = 63.4 bits (154), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 29/123 (23%), Positives = 38/123 (30%), Gaps = 32/123 (26%)

Query: 4   GNVFMSCALEEAQNA---ALRNEIPVGAVAVLNNKIISRAGNRN---------------- 44
              FM  A   A  +     +    V AV V + +IIS   N                  
Sbjct: 12  DQYFMDIAHVAATRSNCSRRQ----VAAVLVRDCRIISTGYNGTPRGVRNCSDGGCPRCN 67

Query: 45  -------RELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRR 97
                     + V +HAE  AI           +    LY T  PC +CA  I  A I  
Sbjct: 68  SDAPSGTNLHQCVCSHAEENAIVQAA--YHGIAVKGATLYTTFSPCLLCAKMIINAGIVE 125

Query: 98  LYY 100
           + Y
Sbjct: 126 VVY 128


>gi|19552809|ref|NP_600811.1| pyrimidine reductase [Corynebacterium glutamicum ATCC 13032]
 gi|62390479|ref|YP_225881.1| bifunctional riboflavin-specific deaminase/reductase
           [Corynebacterium glutamicum ATCC 13032]
 gi|21324366|dbj|BAB98990.1| Pyrimidine reductase, riboflavin biosynthesis [Corynebacterium
           glutamicum ATCC 13032]
 gi|41325816|emb|CAF21605.1| PUTATIVE BIFUNCTIONAL RIBOFLAVIN-SPECIFIC DEAMINASE/REDUCTASE
           [Corynebacterium glutamicum ATCC 13032]
          Length = 328

 Score = 63.4 bits (154), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 28/122 (22%), Positives = 45/122 (36%), Gaps = 32/122 (26%)

Query: 10  CALEEAQNAAL--RN----EIPVGAVAVL-NNKIISRAGNRNRELKDVTA-----HAEIL 57
            AL+ A + +   R       PVGAV +  + +++             TA     HAE++
Sbjct: 5   HALDLAHHVSDQVRGTTSPNPPVGAVILDADGEVVGVG---------ATAPPGGPHAEVV 55

Query: 58  AIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIE 111
           A+                  VTLEPC        C+ A+  A I  ++Y  ++P      
Sbjct: 56  ALAAAG-----VRANGGTAVVTLEPCNHYGRTGPCSKALLDAGIAHVFYANADPFPSAAG 110

Query: 112 NG 113
            G
Sbjct: 111 GG 112


>gi|325180096|emb|CCA14498.1| hypothetical protein SELMODRAFT_438667 [Albugo laibachii Nc14]
          Length = 313

 Score = 63.4 bits (154), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 26/135 (19%), Positives = 56/135 (41%), Gaps = 30/135 (22%)

Query: 28  AVAVLN--NKIISRAGNRNRELKDV---TAHAEILAIRM------GCRI----------- 65
            + V    +K++  + +  R+ K     T H  ++AI         C+            
Sbjct: 174 CLVVDAILDKVVCLSSHAVRDEKYAFETTYHPIMIAIDHVALRDRACKHQSAGQCMERNH 233

Query: 66  -------LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI-ENGTQFY 117
                  L+  +    D+Y+ +EPC MCA A+  +R+RR+++   N   G +  +G    
Sbjct: 234 ELENPPPLTSYLCTSYDVYLDVEPCVMCAMALIHSRVRRVFFHERNHSHGALGGSGIFLQ 293

Query: 118 TLATCHHSPEIYPGI 132
           ++ + +H   ++  +
Sbjct: 294 SIKSLNHHYRVFHAV 308


>gi|195128985|ref|XP_002008939.1| GI13764 [Drosophila mojavensis]
 gi|193920548|gb|EDW19415.1| GI13764 [Drosophila mojavensis]
          Length = 189

 Score = 63.4 bits (154), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 31/121 (25%), Positives = 45/121 (37%), Gaps = 32/121 (26%)

Query: 4   GNVFMSCALEEAQNAALRNEIP---VGAVAVLN-NKIISRAGN----------------- 42
            + FM+ A+  ++ +      P   VGA  V N N+I++   N                 
Sbjct: 34  DDYFMATAILSSKRSKD----PSTQVGACVVDNHNRIVAIGYNGFPRNCSDDEFPWSKDE 89

Query: 43  RNRELKDV---TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLY 99
               +K+      HAE  AI       +   L    LY TL PC  C   I  + IR +Y
Sbjct: 90  DKNSMKNKYMYVVHAEANAILN----SNCTALDGTRLYTTLFPCNECTKLIIQSGIREIY 145

Query: 100 Y 100
           Y
Sbjct: 146 Y 146


>gi|260221154|emb|CBA29435.1| Riboflavin biosynthesis protein ribD [Curvibacter putative symbiont
           of Hydra magnipapillata]
          Length = 363

 Score = 63.4 bits (154), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 28/128 (21%), Positives = 44/128 (34%), Gaps = 16/128 (12%)

Query: 28  AVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM-- 85
            V   +   +     +         HAE++A+R          +     YVTLEPC+   
Sbjct: 16  CVVFKDEYCLGLGHTQKAGG----PHAEVMALRDAAEKGLS--VVGATAYVTLEPCSHHG 69

Query: 86  ----CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYP--GISEQRSRQ 139
               C  A+  A I+++     +P      NG  F  L       E+ P        SR+
Sbjct: 70  RTGPCCDALIQAGIKKVVATNLDPNPLVAGNG--FAKLRAAGVEVEVLPSEHPLAIESRE 127

Query: 140 IIQDFFKE 147
           +   FF  
Sbjct: 128 LNIGFFSR 135


>gi|195378584|ref|XP_002048063.1| GJ13755 [Drosophila virilis]
 gi|194155221|gb|EDW70405.1| GJ13755 [Drosophila virilis]
          Length = 193

 Score = 63.4 bits (154), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 30/120 (25%), Positives = 45/120 (37%), Gaps = 31/120 (25%)

Query: 4   GNVFMSCALEEAQNAALRNEIP---VGAVAV-LNNKIISRAGNR------------NREL 47
            + FM+ AL  ++ +      P   VGA  V  + +I++   N             +++ 
Sbjct: 34  DDYFMATALLSSRRSKD----PSTQVGACIVDKHKRIVAIGYNGFPRDCSDDVFSWSKDN 89

Query: 48  KDVT-------AHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
            D          HAE  AI       +   L    LY TL PC  C   I  + IR +YY
Sbjct: 90  SDPLENKNMYVVHAEANAILN----SNSRSLDGTRLYTTLFPCNECTKLIIQSGIREIYY 145


>gi|256003264|ref|ZP_05428256.1| CMP/dCMP deaminase zinc-binding [Clostridium thermocellum DSM 2360]
 gi|255992955|gb|EEU03045.1| CMP/dCMP deaminase zinc-binding [Clostridium thermocellum DSM 2360]
          Length = 174

 Score = 63.4 bits (154), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 24/99 (24%), Positives = 37/99 (37%), Gaps = 27/99 (27%)

Query: 26  VGAVAVLNNKIISRAGN------------------------RNRELKDVTAHAEILAIRM 61
           VGA+ V + +I++   N                        +  EL     HAE  AI  
Sbjct: 48  VGALIVKDKRILATGYNGAPMGCKHCSEIGCLREKLNVPSGQRHELCRAI-HAEQNAIVQ 106

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
                S   +    LYVT +PC +CA     A I+++ +
Sbjct: 107 AA--YSGTSVNGGTLYVTTQPCILCAKMAINAGIKKIVF 143


>gi|57530125|ref|NP_001006444.1| deoxycytidylate deaminase [Gallus gallus]
 gi|53133480|emb|CAG32069.1| hypothetical protein RCJMB04_17c11 [Gallus gallus]
          Length = 190

 Score = 63.4 bits (154), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 30/119 (25%), Positives = 42/119 (35%), Gaps = 31/119 (26%)

Query: 5   NVFMSCALEEAQNAALRNEIP---VGAVAV-LNNKIISRAGN------------------ 42
             FM+ A   AQ +      P   VGA  V   NKI+    N                  
Sbjct: 29  EYFMAVAFLSAQRSKD----PSSQVGACIVNSENKIVGIGYNGMPNGCSDDVLPWTRAAA 84

Query: 43  RNRELKDV-TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
            + + K     HAE+ AI       +   +    +YV L PC  CA  I  A I+ + +
Sbjct: 85  HSLDTKYPYVCHAELNAIMN----KNSADVKGCSMYVALFPCNECAKLIIQAGIKEVIF 139


>gi|258510212|ref|YP_003183646.1| CMP/dCMP deaminase zinc-binding [Alicyclobacillus acidocaldarius
           subsp. acidocaldarius DSM 446]
 gi|257476938|gb|ACV57257.1| CMP/dCMP deaminase zinc-binding [Alicyclobacillus acidocaldarius
           subsp. acidocaldarius DSM 446]
          Length = 151

 Score = 63.4 bits (154), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 32/115 (27%), Positives = 45/115 (39%), Gaps = 18/115 (15%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGN--------------RNRE 46
           M   + F S A   A  +     + VG V V + +II+   N              +  +
Sbjct: 8   MDWHSFFASQARVMAARSTCTR-LQVGCVVVRDKRIIASGYNGSIHGDEHCVDVGCKVVD 66

Query: 47  LKDVTA-HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
              V A HAE  A+    R          DLYVT  PC  C  ++  A IRR++Y
Sbjct: 67  GHCVRAIHAEQNALLQCARFGIAA--EGADLYVTHTPCLTCTKSLIQAGIRRVFY 119


>gi|67608724|ref|XP_666899.1| dCMP deaminase; Dcd1p [Cryptosporidium hominis TU502]
 gi|54657972|gb|EAL36670.1| dCMP deaminase; Dcd1p [Cryptosporidium hominis]
          Length = 373

 Score = 63.4 bits (154), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 29/129 (22%), Positives = 37/129 (28%), Gaps = 45/129 (34%)

Query: 4   GNVFMSCALEEA--------QNAALRNEIPVGAVAVLNNKIISRAGN------------- 42
              FM  A + A        +         VG+V V   KIIS   N             
Sbjct: 225 DEYFMKIA-KLASQRSNCVSRK--------VGSVIVKEKKIISTGYNGTPKNMKNCFEGG 275

Query: 43  -------RNRELKD----VTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAIS 91
                     E K        HAE  A+         +      +YVTL PC  C   I 
Sbjct: 276 CTRCANPNRVEGKSLETCSCMHAETNALLFA----GIDKCIGATIYVTLMPCISCTKNII 331

Query: 92  LARIRRLYY 100
              I R+ +
Sbjct: 332 QCEIERVVF 340


>gi|254780348|ref|YP_003064761.1| 5-amino-6-(5-phosphoribosylamino)uracil
          reductase/diaminohydroxyphosphoribosylaminopyrimidine
          [Candidatus Liberibacter asiaticus str. psy62]
 gi|254040025|gb|ACT56821.1| 5-amino-6-(5-phosphoribosylamino)uracil
          reductase/diaminohydroxyphosphoribosylaminopyrimidine
          [Candidatus Liberibacter asiaticus str. psy62]
          Length = 364

 Score = 63.4 bits (154), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 26/101 (25%), Positives = 33/101 (32%), Gaps = 17/101 (16%)

Query: 4  GNVFMSCALEEAQ--NAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
             FMS AL  ++           V  + V +  +I R             HAE+ A+  
Sbjct: 7  DARFMSAALRFSRWHVGLTSTNPSVACLIVKDGIVIGRG----VTAYGGCPHAEVQALEE 62

Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIR 96
                 E       YVTLEPC        CA  I    IR
Sbjct: 63 AG-----EEARGATAYVTLEPCSHYGRSPPCAQFIIECGIR 98


>gi|195379983|ref|XP_002048750.1| GJ21218 [Drosophila virilis]
 gi|194143547|gb|EDW59943.1| GJ21218 [Drosophila virilis]
          Length = 358

 Score = 63.4 bits (154), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 15/65 (23%), Positives = 33/65 (50%), Gaps = 1/65 (1%)

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
                +    D+Y+  EPC MCA A+  +R++R+++   +   G +    Q +++   +H
Sbjct: 291 KYGPYLCTGYDVYLLREPCLMCAMALVHSRVKRIFFLEQSDD-GALATSFQLHSVKELNH 349

Query: 125 SPEIY 129
             E++
Sbjct: 350 HYEVF 354


>gi|144575095|gb|AAZ43808.2| deoxycytidylate deaminase fusion protein [Mycoplasma synoviae 53]
          Length = 168

 Score = 63.4 bits (154), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 34/128 (26%), Positives = 51/128 (39%), Gaps = 31/128 (24%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAV-LNNKIISRAGN-------------- 42
           +   + FM      A+ +ALR++ P   VGA  V   N II    N              
Sbjct: 11  ISWDDYFMG----LAKLSALRSKDPSTQVGACIVNRQNHIIGMGYNGMPNGEDELFPWES 66

Query: 43  RNRELKDV----TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98
            + + KD       HAE+ AI     +L         +Y +L PC+ CA  I  ++I+ L
Sbjct: 67  NSSDEKDNKYPYVMHAEVNAILNTSVMLQN---SNATIYTSLFPCSNCAKIIVQSQIKEL 123

Query: 99  YYGASNPK 106
            Y   + K
Sbjct: 124 VY--EDDK 129


>gi|148555358|ref|YP_001262940.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Sphingomonas wittichii RW1]
 gi|148500548|gb|ABQ68802.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Sphingomonas wittichii RW1]
          Length = 313

 Score = 63.4 bits (154), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 30/130 (23%), Positives = 42/130 (32%), Gaps = 21/130 (16%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC-- 83
           VG V V + ++I R             H           I +   L    LYVTLEPC  
Sbjct: 21  VGCVIVRDGRVIGRGW--TGAGGRP--H------AEAIAIEAAGDLAGATLYVTLEPCAH 70

Query: 84  -----TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSR 138
                  CA  I  A+  R+     +P       G    T A       +  G+  + +R
Sbjct: 71  VSARGPACADLIVAAKPARVVIALRDPDPRTDGRGIARITAAG----IAVATGVEAEAAR 126

Query: 139 QIIQDFFKER 148
             +  F   R
Sbjct: 127 ASMAGFLTRR 136


>gi|71894411|ref|YP_278519.1| deoxycytidylate deaminase fusion protein [Mycoplasma synoviae 53]
          Length = 169

 Score = 63.4 bits (154), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 34/128 (26%), Positives = 51/128 (39%), Gaps = 31/128 (24%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAV-LNNKIISRAGN-------------- 42
           +   + FM      A+ +ALR++ P   VGA  V   N II    N              
Sbjct: 12  ISWDDYFMG----LAKLSALRSKDPSTQVGACIVNRQNHIIGMGYNGMPNGEDELFPWES 67

Query: 43  RNRELKDV----TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98
            + + KD       HAE+ AI     +L         +Y +L PC+ CA  I  ++I+ L
Sbjct: 68  NSSDEKDNKYPYVMHAEVNAILNTSVMLQN---SNATIYTSLFPCSNCAKIIVQSQIKEL 124

Query: 99  YYGASNPK 106
            Y   + K
Sbjct: 125 VY--EDDK 130


>gi|67467781|ref|XP_649973.1| hypothetical protein [Entamoeba histolytica HM-1:IMSS]
 gi|56466510|gb|EAL44587.1| hypothetical protein, conserved [Entamoeba histolytica HM-1:IMSS]
          Length = 288

 Score = 63.4 bits (154), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 17/86 (19%), Positives = 31/86 (36%), Gaps = 1/86 (1%)

Query: 44  NRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
             +      HA   A++       + +    DL+ T EPC MC  A+  +R  R+++   
Sbjct: 199 TIKSNHPLLHAPFNALQSIPLNHKKYLCTGFDLFTTHEPCLMCGMALLHSRFGRVFFIHQ 258

Query: 104 NPKGGGIENGTQFYTLATCHHSPEIY 129
           +   G              +H   +Y
Sbjct: 259 HKTNGAF-TIHHLNKKKQLNHHFNVY 283


>gi|154302467|ref|XP_001551643.1| hypothetical protein BC1G_09810 [Botryotinia fuckeliana B05.10]
 gi|150855299|gb|EDN30491.1| hypothetical protein BC1G_09810 [Botryotinia fuckeliana B05.10]
          Length = 357

 Score = 63.0 bits (153), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 29/122 (23%), Positives = 37/122 (30%), Gaps = 31/122 (25%)

Query: 4   GNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGN---------------RNRE 46
              FM  A   AQ +    R    VG V V   ++IS   N               R  E
Sbjct: 202 DQYFMQLASLAAQRSNCMKRR---VGCVLVREKRVISTGYNGTPRGLLNCGEGGCSRCNE 258

Query: 47  LKDV--------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98
            +            HAE  A+    R   +E      LY    PC  C+  I    I  +
Sbjct: 259 GQGSGVGLGTCLCLHAEENALLEAGRERVREN---AILYCDTCPCLTCSIKIVQVGISEV 315

Query: 99  YY 100
            Y
Sbjct: 316 VY 317


>gi|118350811|ref|XP_001008684.1| Cytidine and deoxycytidylate deaminase zinc-binding region family
           protein [Tetrahymena thermophila]
 gi|89290451|gb|EAR88439.1| Cytidine and deoxycytidylate deaminase zinc-binding region family
           protein [Tetrahymena thermophila SB210]
          Length = 337

 Score = 63.0 bits (153), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 3/70 (4%)

Query: 69  EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPK---GGGIENGTQFYTLATCHHS 125
                +D+++  EPC MC+ A+  +R+RR+YY   NPK    GG+        + + +HS
Sbjct: 251 YYCTGLDIFIVQEPCIMCSMALIHSRVRRVYYSLKNPKQEQFGGLNEDLMINHMDSLNHS 310

Query: 126 PEIYPGISEQ 135
             ++  +  +
Sbjct: 311 FLVFQNVESE 320


>gi|260892001|ref|YP_003238098.1| CMP/dCMP deaminase zinc-binding protein [Ammonifex degensii KC4]
 gi|260864142|gb|ACX51248.1| CMP/dCMP deaminase zinc-binding protein [Ammonifex degensii KC4]
          Length = 162

 Score = 63.0 bits (153), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 23/98 (23%), Positives = 33/98 (33%), Gaps = 25/98 (25%)

Query: 26  VGAVAVLNNKIISRAGN--------------RNRELKDVTA---------HAEILAIRMG 62
           VGA    +N+I++   N                 E    +          HAE  A+   
Sbjct: 27  VGACLTRDNRILATGYNGAPSGLKHCLEIGCLREEKGIPSGERHELCRGLHAEQNALLQA 86

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
                   +    LY T  PC +CA  +  ARI R+ Y
Sbjct: 87  AVYGVS--IAGATLYTTHFPCALCAKMLIQARIERVVY 122


>gi|195335637|ref|XP_002034470.1| GM21898 [Drosophila sechellia]
 gi|194126440|gb|EDW48483.1| GM21898 [Drosophila sechellia]
          Length = 360

 Score = 63.0 bits (153), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 15/66 (22%), Positives = 32/66 (48%), Gaps = 1/66 (1%)

Query: 64  RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123
                 +    D+Y+  EPC MC+ A+  +R +R+++   N   G +    Q +++   +
Sbjct: 285 AKFGPYLCTGYDIYLLQEPCLMCSMALVHSRAKRVFF-VKNSDNGALATRFQLHSVRELN 343

Query: 124 HSPEIY 129
           H  E++
Sbjct: 344 HHYEVF 349


>gi|111219910|ref|YP_710704.1| cytidine and deoxycytidylate deaminase zinc-binding region [Frankia
           alni ACN14a]
 gi|111147442|emb|CAJ59092.1| Cytidine and deoxycytidylate deaminase zinc-binding region [Frankia
           alni ACN14a]
          Length = 213

 Score = 63.0 bits (153), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 21/95 (22%), Positives = 31/95 (32%), Gaps = 7/95 (7%)

Query: 8   MSCALEEAQNAALRN-EIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           M      A          P  AV       +I +   N          HAE++A+     
Sbjct: 46  MDLVHRLAARNHREGCGGPFAAVVANPDTGQIHAAGVNLVLATGLSAMHAEVVALSFAQA 105

Query: 65  ILSQEILPE----VDLYVTLEPCTMCAAAISLARI 95
            L +  L      V+L V   PC MC  A+  + +
Sbjct: 106 RLGRWDLSAVGSPVELVVNWRPCVMCYGAVMWSGV 140


>gi|150864324|ref|XP_001383092.2| tRNA-specific adenosine-34 deaminase subunit [Scheffersomyces
           stipitis CBS 6054]
 gi|149385580|gb|ABN65063.2| tRNA-specific adenosine-34 deaminase subunit [Scheffersomyces
           stipitis CBS 6054]
          Length = 325

 Score = 63.0 bits (153), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 24/104 (23%), Positives = 39/104 (37%), Gaps = 14/104 (13%)

Query: 46  ELKDVTAHAEILAIRMGC--------------RILSQEILPEVDLYVTLEPCTMCAAAIS 91
              D   H+ +  I                  +  S  +   + ++ + EPC MC  A+ 
Sbjct: 204 SHNDPFQHSIMQGIEQVSLEEQKKRKDLSTSKQDRSNYLCQNMTVFSSHEPCVMCCMALV 263

Query: 92  LARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQ 135
            +RI RL Y  S+P  GG+E   Q       +   EI+  I  +
Sbjct: 264 HSRISRLIYLRSSPSSGGLETNYQLGDREGLNWKFEIWKWIDRK 307


>gi|332558836|ref|ZP_08413158.1| riboflavin biosynthesis protein RibD [Rhodobacter sphaeroides WS8N]
 gi|332276548|gb|EGJ21863.1| riboflavin biosynthesis protein RibD [Rhodobacter sphaeroides WS8N]
          Length = 356

 Score = 63.0 bits (153), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 29/139 (20%), Positives = 42/139 (30%), Gaps = 21/139 (15%)

Query: 8   MSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M+ AL        R      VG V V   +++ R   R         HAE +        
Sbjct: 1   MAHALRLGARGLGRTWPNPAVGCVIVKAGRVVGRGWTRPGGR----PHAEPV-----ALA 51

Query: 66  LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
            +         YVTLEPC        CA A+    + R+     +P       G      
Sbjct: 52  QAGAAALGATAYVTLEPCSHHGRTPPCAEALIAVGLARVVTATGDPDPRVSGRGHAMLRE 111

Query: 120 ATCHHSPEIYPGISEQRSR 138
           A       +   + E  +R
Sbjct: 112 AG----IAVTERVLEAEAR 126


>gi|169335784|ref|ZP_02862977.1| hypothetical protein ANASTE_02209 [Anaerofustis stercorihominis DSM
           17244]
 gi|169258522|gb|EDS72488.1| hypothetical protein ANASTE_02209 [Anaerofustis stercorihominis DSM
           17244]
          Length = 154

 Score = 63.0 bits (153), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 27/99 (27%), Positives = 39/99 (39%), Gaps = 27/99 (27%)

Query: 26  VGAVAVLNNKIISRAGN------------------------RNRELKDVTAHAEILAIRM 61
           VGA+ V ++KIIS   N                           EL   T HAE  AI  
Sbjct: 32  VGAIIVKDHKIISTGYNGAPKGLAHCTKDTCVRLKYNIKSGERHELCRAT-HAEQNAIIS 90

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
              +     +   D+Y+T  PC +C+  +  A I+R+ Y
Sbjct: 91  AATMGVS--VEGADIYITDSPCILCSKMLINAGIKRIIY 127


>gi|194212324|ref|XP_001917931.1| PREDICTED: similar to Deoxycytidylate deaminase (dCMP deaminase)
           [Equus caballus]
          Length = 178

 Score = 63.0 bits (153), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 30/116 (25%), Positives = 40/116 (34%), Gaps = 25/116 (21%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGN-RNRELKD------VTA---- 52
             FM+ A   AQ +   N   V A  V   NKI+    N       D       TA    
Sbjct: 17  EYFMAVAFLSAQRSKDPNSQ-VAACIVNAENKIVGIGYNGMPNGCSDDLLPWRRTAENKL 75

Query: 53  --------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
                   HAE+ AI       +   +    +YV L PC  CA  I    I+ + +
Sbjct: 76  DTKYPYVCHAELNAIMN----KNSADVKGCTMYVALFPCNECAKLIIQTGIKEVIF 127


>gi|291548233|emb|CBL21341.1| Deoxycytidylate deaminase [Ruminococcus sp. SR1/5]
          Length = 164

 Score = 63.0 bits (153), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 33/125 (26%), Positives = 42/125 (33%), Gaps = 30/125 (24%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVL-NNKIISRAGNRN-----------R 45
           +     FM  A+     +      P   VGA  V  +NKI+S   N              
Sbjct: 12  LSWDEYFMGVAMLSGMRSKD----PHSQVGACIVSEDNKILSMGYNGFPKGCSDDEFPWG 67

Query: 46  ELKDVT-------AHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98
              D          H+E+ AI           L    LYV+L PC  CA AI  A IR +
Sbjct: 68  REGDPLDTKYLYVTHSELNAILN----YRGGSLEGAKLYVSLFPCNECAKAIIQAGIRTI 123

Query: 99  YYGAS 103
            Y   
Sbjct: 124 VYDCD 128


>gi|256832227|ref|YP_003160954.1| CMP/dCMP deaminase zinc-binding [Jonesia denitrificans DSM 20603]
 gi|256685758|gb|ACV08651.1| CMP/dCMP deaminase zinc-binding [Jonesia denitrificans DSM 20603]
          Length = 283

 Score = 63.0 bits (153), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 26/121 (21%), Positives = 45/121 (37%), Gaps = 15/121 (12%)

Query: 9   SCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQ 68
             A+EEA  ++      VGAV      +++    ++   K    HAE +A+      +  
Sbjct: 14  KKAIEEALKSSDNAR--VGAVIARGETVLATGY-KSEIDK---LHAEQIALHKA--EMQG 65

Query: 69  EILPEVDLYVTLEPC-------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
             +    LY T+EPC         CA  ++ A I  ++ G  +P       G +      
Sbjct: 66  VDVKGATLYTTMEPCANSRTSRVPCAELVAEAGIVEVHIGEYDPNPQVYRLGWKHLRDRG 125

Query: 122 C 122
            
Sbjct: 126 I 126


>gi|295674403|ref|XP_002797747.1| deoxycytidylate deaminase [Paracoccidioides brasiliensis Pb01]
 gi|226280397|gb|EEH35963.1| deoxycytidylate deaminase [Paracoccidioides brasiliensis Pb01]
          Length = 350

 Score = 63.0 bits (153), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 29/122 (23%), Positives = 37/122 (30%), Gaps = 31/122 (25%)

Query: 4   GNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGNRN-RELKDV---------- 50
              FM  A   AQ +    R    VG V V   ++IS   N   R  K+           
Sbjct: 186 DQYFMQLASLAAQRSNCMKRR---VGCVIVREKRVISTGYNGTPRNTKNCNEGGCPRCNC 242

Query: 51  ------------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98
                         HAE  A+    R    E      LY    PC  C+  I+   I  +
Sbjct: 243 GEGGGAALSTCLCIHAEENALLEAGRERIGE---AAILYCNTCPCLTCSVKIAQLGISEV 299

Query: 99  YY 100
            Y
Sbjct: 300 VY 301


>gi|218778060|ref|YP_002429378.1| dCMP deaminase [Desulfatibacillum alkenivorans AK-01]
 gi|218759444|gb|ACL01910.1| dCMP deaminase [Desulfatibacillum alkenivorans AK-01]
          Length = 166

 Score = 63.0 bits (153), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 32/119 (26%), Positives = 38/119 (31%), Gaps = 30/119 (25%)

Query: 4   GNVFMSCALEEAQNAALRNEIP---VGAVAV-LNNKIISRAGN--------------RNR 45
              FM  A   AQ +      P   VGA  V    KI+    N              R  
Sbjct: 12  DEYFMGVACLSAQRSKD----PNTQVGACVVNRKKKIVGIGYNGFPTGCSDDELPWAREG 67

Query: 46  ELKDV----TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
              D       HAE+ AI           L    LYV L PC  CA  I  + I+ + Y
Sbjct: 68  GALDTKYAYVCHAELNAILN----SIVSDLEGCTLYVALFPCNECAKIIIQSGIKEIVY 122


>gi|148973883|ref|ZP_01811416.1| putative deoxycytidylate deaminase [Vibrionales bacterium SWAT-3]
 gi|145965580|gb|EDK30828.1| putative deoxycytidylate deaminase [Vibrionales bacterium SWAT-3]
          Length = 147

 Score = 63.0 bits (153), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 25/86 (29%), Positives = 32/86 (37%), Gaps = 18/86 (20%)

Query: 26  VGAVAVLNNKIISRAGN-------------RNRELKDVTAHAEILAIRMGCRILSQEILP 72
           VGAV   +N+I+S   N                     T HAE  AI    R      L 
Sbjct: 27  VGAVITKHNRIVSVGFNGYPHGVSDSADTDDREMKYLKTLHAEENAILFAKR-----DLD 81

Query: 73  EVDLYVTLEPCTMCAAAISLARIRRL 98
             +++VT  PC  CAA I    I  +
Sbjct: 82  SCEIWVTHFPCPNCAAKIIQTGISAV 107


>gi|182415443|ref|YP_001820509.1| CMP/dCMP deaminase zinc-binding [Opitutus terrae PB90-1]
 gi|177842657|gb|ACB76909.1| CMP/dCMP deaminase zinc-binding [Opitutus terrae PB90-1]
          Length = 150

 Score = 63.0 bits (153), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 29/112 (25%), Positives = 41/112 (36%), Gaps = 18/112 (16%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAV----LNNKIISRAGN-------RNRELKD--- 49
              FM+ A+  +  +       VG V V      N+I++   N           L+D   
Sbjct: 18  DEYFMATAVLLSTRSNCERLH-VGCVVVTGGDRKNRIVAAGYNGFLPGAAHTSRLRDGRE 76

Query: 50  -VTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
             T HAE  AI    R  S   +     YVT  PC  C   ++ A I  + Y
Sbjct: 77  QATVHAEQNAIADAARRGSS--VEGCVAYVTHYPCINCIKILAAAGIAEVRY 126


>gi|255954833|ref|XP_002568169.1| Pc21g11370 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211589880|emb|CAP96034.1| Pc21g11370 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 331

 Score = 63.0 bits (153), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 29/122 (23%), Positives = 39/122 (31%), Gaps = 31/122 (25%)

Query: 4   GNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGNRN-RELKDV---------- 50
              FM  A   AQ +    R    VG V V  +++IS   N   R L++           
Sbjct: 192 DQYFMQLASLAAQRSNCMKRR---VGCVLVRESRVISTGYNGTPRHLQNCNQGGCPRCNR 248

Query: 51  ------------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98
                         HAE  A+    R   +E      LY    PC  C   I+   I  +
Sbjct: 249 GDGGGAGLSTCLCLHAEENALLEAGRERIRE---GAILYCDTCPCLTCTVKIAQVGISEV 305

Query: 99  YY 100
            Y
Sbjct: 306 VY 307


>gi|212224519|ref|YP_002307755.1| deoxycytidylate deaminase [Thermococcus onnurineus NA1]
 gi|212009476|gb|ACJ16858.1| deoxycytidylate deaminase [Thermococcus onnurineus NA1]
          Length = 181

 Score = 63.0 bits (153), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 31/117 (26%), Positives = 38/117 (32%), Gaps = 24/117 (20%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNR--------------- 43
            K   FM  A   +  A      P   VGAVAV +  I++   N                
Sbjct: 23  TKDEYFMLIAKLVSLRATC----PRLRVGAVAVKDGYILATGYNGAPRGMEHCIDVGCLI 78

Query: 44  NRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
                    HAE   I M  R      L    LYVT  PC  C   +  A I+ + Y
Sbjct: 79  VDGHCHRAVHAEQNVIAMAARKGIS--LEGATLYVTHFPCDTCFKLVINAGIKEIVY 133


>gi|311992960|ref|YP_004009827.1| Cd dCMP deaminase [Acinetobacter phage Acj61]
 gi|295815249|gb|ADG36175.1| Cd dCMP deaminase [Acinetobacter phage Acj61]
          Length = 184

 Score = 63.0 bits (153), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 32/139 (23%), Positives = 46/139 (33%), Gaps = 51/139 (36%)

Query: 7   FMSCAL---EEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELK--------------- 48
           FM  A    +E++  + +    VGAV   N +IIS   N  RE                 
Sbjct: 6   FMQIAYLVSQESKCVSWK----VGAVIAKNGRIISTGYNGTREGGVNCCDHAHEQGWTEQ 61

Query: 49  --DVTA-------------------------HAEILAIRMGCRILSQEILPEVDLYVTLE 81
             +                            HAE+ AI    +      +    +YVTL 
Sbjct: 62  RYNPVPPHVNQVVLKNEFREVHSAWSSAHEIHAELNAILFAAKNGLP--IDGATMYVTLS 119

Query: 82  PCTMCAAAISLARIRRLYY 100
           PC  CA +I    I++L Y
Sbjct: 120 PCRECAKSILQTGIKKLVY 138


>gi|313888782|ref|ZP_07822443.1| putative ComE operon protein 2 [Peptoniphilus harei
           ACS-146-V-Sch2b]
 gi|312845151|gb|EFR32551.1| putative ComE operon protein 2 [Peptoniphilus harei
           ACS-146-V-Sch2b]
          Length = 139

 Score = 63.0 bits (153), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 30/118 (25%), Positives = 40/118 (33%), Gaps = 21/118 (17%)

Query: 1   MKK--GNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKD-------- 49
           M+K     FM      A  +       VG V V  +N+IIS   N +             
Sbjct: 1   MRKSWDEYFMEITEMVATRSTCDRAF-VGCVLVNSDNRIISTGYNGSVTGNPHCDEVGHT 59

Query: 50  -------VTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
                   T HAE+ A+    +            YVT  PC  C  A+  A IR + Y
Sbjct: 60  MRDGHCIATIHAEMNALLYCAKEGISVR--GAKAYVTHFPCLNCTKALIQAGIREIIY 115


>gi|221502412|gb|EEE28139.1| cytidine and deoxycytidylate deaminase zinc-binding region,
           putative [Toxoplasma gondii VEG]
          Length = 692

 Score = 63.0 bits (153), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 16/62 (25%), Positives = 28/62 (45%), Gaps = 1/62 (1%)

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
                    +Y + EPC +CA A+  +RI+ L++   N   GGI  G + +     +H  
Sbjct: 616 GNYYCQGCVVYCSHEPCVLCAMALIHSRIKLLFFVHDNKVHGGITRG-RLHLDRRLNHGY 674

Query: 127 EI 128
            +
Sbjct: 675 RV 676


>gi|221482209|gb|EEE20570.1| cytidine and deoxycytidylate deaminase zinc-binding region
           domain-containing protein, putative [Toxoplasma gondii
           GT1]
          Length = 692

 Score = 63.0 bits (153), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 16/62 (25%), Positives = 28/62 (45%), Gaps = 1/62 (1%)

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
                    +Y + EPC +CA A+  +RI+ L++   N   GGI  G + +     +H  
Sbjct: 616 GNYYCQGCVVYCSHEPCVLCAMALIHSRIKLLFFVHDNKVHGGITRG-RLHLDRRLNHGY 674

Query: 127 EI 128
            +
Sbjct: 675 RV 676


>gi|297559747|ref|YP_003678721.1| CMP/dCMP deaminase zinc-binding protein [Nocardiopsis dassonvillei
           subsp. dassonvillei DSM 43111]
 gi|296844195|gb|ADH66215.1| CMP/dCMP deaminase zinc-binding protein [Nocardiopsis dassonvillei
           subsp. dassonvillei DSM 43111]
          Length = 156

 Score = 63.0 bits (153), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 28/119 (23%), Positives = 45/119 (37%), Gaps = 15/119 (12%)

Query: 26  VGA-VAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC- 83
           VG  V   +  ++    +R     D   HAE  A+R          L    LY +LEPC 
Sbjct: 36  VGCAVVAADGTVLGEGYSRR---DDPHDHAEEAALREVDA--DDPRLAGATLYSSLEPCS 90

Query: 84  -----TMCAAAISLAR-IRRLYYGASNPKGGGIENGTQFYTLA--TCHHSPEIYPGISE 134
                 +  +A+ LA  + R+ +    P      +G +    A  T    P++  G+ E
Sbjct: 91  SRASRPLSCSALILATPVARVVFAWREPSVFVDCDGAERLRAAGRTVVERPDLADGVRE 149


>gi|229815226|ref|ZP_04445562.1| hypothetical protein COLINT_02272 [Collinsella intestinalis DSM
           13280]
 gi|229809236|gb|EEP45002.1| hypothetical protein COLINT_02272 [Collinsella intestinalis DSM
           13280]
          Length = 156

 Score = 63.0 bits (153), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 29/123 (23%), Positives = 42/123 (34%), Gaps = 30/123 (24%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVL-NNKIISRAGNRNRELKD------V 50
           +     FM  A+  +  +      P   VGA     NN+I+S   N      +       
Sbjct: 9   ISWDEFFMRAAVAASLRSKD----PNTQVGACIADTNNRILSVGYNGTPSALNDDDFPWG 64

Query: 51  TA------------HAEILAIRMGCRILSQ-EILPEVDLYVTLEPCTMCAAAISLARIRR 97
           TA            HAE  AI          + +    +YVTL PC  CA  +  A +  
Sbjct: 65  TADDPLHDKHNYVIHAEANAI---LNYRGSLKDMAGATVYVTLFPCHECAKTLVQAGVGE 121

Query: 98  LYY 100
           + Y
Sbjct: 122 VVY 124


>gi|237845333|ref|XP_002371964.1| hypothetical protein TGME49_000420 [Toxoplasma gondii ME49]
 gi|211969628|gb|EEB04824.1| hypothetical protein TGME49_000420 [Toxoplasma gondii ME49]
          Length = 180

 Score = 63.0 bits (153), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 26/115 (22%), Positives = 40/115 (34%), Gaps = 29/115 (25%)

Query: 26  VGAVAVLNNKIISRAGNRNREL------------KDVT------------AHAEILAIRM 61
           VGA+    N++I+   N                  D +             HAE  A+  
Sbjct: 45  VGAIVARGNRVIATGYNGTPSQAANCNAGGCARCNDPSVSQGRALEACECIHAEANALLE 104

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG-ASNPKGGGIENGTQ 115
             R    +      LYVT  PC  CA  +  + IR + Y    + K G ++  T+
Sbjct: 105 AGR----DRAMNGTLYVTCLPCLGCAKLVVQSAIRTVVYAEEYDDKSGALDLLTR 155


>gi|154505649|ref|ZP_02042387.1| hypothetical protein RUMGNA_03188 [Ruminococcus gnavus ATCC 29149]
 gi|153794088|gb|EDN76508.1| hypothetical protein RUMGNA_03188 [Ruminococcus gnavus ATCC 29149]
          Length = 162

 Score = 63.0 bits (153), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 32/123 (26%), Positives = 45/123 (36%), Gaps = 31/123 (25%)

Query: 4   GNVFMSCALEEAQNAALRNEIP---VGAVAVL-NNKIISRAGNRN------------REL 47
              FM  A+     +      P   VG   V  +NKI+S   N              RE 
Sbjct: 12  DEYFMGVAMLSGMRSKD----PNTQVGCCIVSQDNKILSMGYNGFPKGCSDDEFPWAREG 67

Query: 48  KDV-------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
           ++        + H+E+ AI       S   L    LYV+L PC  CA AI  + I+ + Y
Sbjct: 68  ENPLETKYVYSTHSELNAILN----YSGGSLAGAKLYVSLFPCNECAKAIIQSGIKEVIY 123

Query: 101 GAS 103
              
Sbjct: 124 DCD 126


>gi|116492911|ref|YP_804646.1| deoxycytidylate deaminase [Pediococcus pentosaceus ATCC 25745]
 gi|116103061|gb|ABJ68204.1| Deoxycytidylate deaminase [Pediococcus pentosaceus ATCC 25745]
          Length = 160

 Score = 63.0 bits (153), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 23/115 (20%), Positives = 41/115 (35%), Gaps = 18/115 (15%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGN---------------RNR 45
           +     FM+ A   +  +     + VGAV V + ++I+   N                  
Sbjct: 5   IDWDQYFMTQATLLSLRSTCTR-LSVGAVIVRDRRVIAGGYNGSVSGDVHCIDEGCYLVE 63

Query: 46  ELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
                T HAE+ A+    +          ++YVT  PC  C   +  + I ++ Y
Sbjct: 64  GHCVRTIHAEMNAVLQCAKFGVATD--GAEVYVTDFPCLQCTKMLLQSGIIKINY 116


>gi|325679150|ref|ZP_08158742.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Ruminococcus albus 8]
 gi|324109155|gb|EGC03379.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Ruminococcus albus 8]
          Length = 159

 Score = 63.0 bits (153), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 32/125 (25%), Positives = 49/125 (39%), Gaps = 31/125 (24%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLN-NKIISRAGNR----NRELKDV-- 50
           +   + F+  A    + +A R++ P   VGA  V   NKI+S   N       + +    
Sbjct: 8   ISWDDYFLGIA----ELSAARSKDPNTQVGACIVSEENKILSVGYNGMPAGCNDDEMPWG 63

Query: 51  ------------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98
                         HAE+ AI     + S   L    +YV+L PC  CA AI  + I+ +
Sbjct: 64  REGDFLDTKYPFVCHAELNAI-----LNSNHDLKGSRIYVSLFPCNECAKAIIQSGIKEV 118

Query: 99  YYGAS 103
            Y   
Sbjct: 119 IYTCD 123


>gi|299143279|ref|ZP_07036359.1| cytidine/deoxycytidylate deaminase family protein [Peptoniphilus
           sp. oral taxon 386 str. F0131]
 gi|298517764|gb|EFI41503.1| cytidine/deoxycytidylate deaminase family protein [Peptoniphilus
           sp. oral taxon 386 str. F0131]
          Length = 143

 Score = 62.6 bits (152), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 24/91 (26%), Positives = 38/91 (41%), Gaps = 18/91 (19%)

Query: 26  VGAVAV-LNNKIISRAGNRN---RELKD------------VTAHAEILAIRMGCRILSQE 69
           VG V V  +++I+S   N +       D             T HAE+ A+ + C      
Sbjct: 27  VGCVIVNKDHRIVSTGYNGSLAGNPQCDEIGHTMRDGHCIATIHAEMNAL-LYCAKEGIP 85

Query: 70  ILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
           +  +   YVT  PC  C  ++  A I+ +YY
Sbjct: 86  V-KDCVAYVTHFPCLNCTKSLIQAGIKAIYY 115


>gi|240274201|gb|EER37719.1| deoxycytidylate deaminase [Ajellomyces capsulatus H143]
          Length = 385

 Score = 62.6 bits (152), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 28/122 (22%), Positives = 37/122 (30%), Gaps = 31/122 (25%)

Query: 4   GNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGNRN-RELKDV---------- 50
              FM  A   AQ +    R    VG V V   +++S   N   R  K+           
Sbjct: 216 DQYFMQLASLAAQRSNCMKRR---VGCVLVRGRRVMSTGYNGTPRNTKNCNEGGCPRCNC 272

Query: 51  ------------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98
                         HAE  A+    R    E      LY    PC  C+  I+   I  +
Sbjct: 273 GEGGGAALSTCLCIHAEENALLEAGRERIGE---GATLYCNTCPCLTCSVKIAQLGISEV 329

Query: 99  YY 100
            Y
Sbjct: 330 VY 331


>gi|28950120|emb|CAD70900.1| probable dCMP deaminase [Neurospora crassa]
          Length = 420

 Score = 62.6 bits (152), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 29/122 (23%), Positives = 41/122 (33%), Gaps = 31/122 (25%)

Query: 4   GNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGN---------------RNRE 46
            + FM+ A   AQ +    R    VG V V + ++IS   N               R  E
Sbjct: 239 DSYFMALASLAAQRSNCMKRR---VGCVVVRDKRVISTGYNGTPRGLINCGEGGCGRCNE 295

Query: 47  LKDV--------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98
            +            HAE  A+    R   +E      LY    PC  C+  I+   I  +
Sbjct: 296 GQGSGQGLSTCLCMHAEENALLEAGRERVRE---GAVLYCDTCPCLTCSIKIAQVGISEV 352

Query: 99  YY 100
            Y
Sbjct: 353 VY 354


>gi|224122016|ref|XP_002318729.1| predicted protein [Populus trichocarpa]
 gi|222859402|gb|EEE96949.1| predicted protein [Populus trichocarpa]
          Length = 225

 Score = 62.6 bits (152), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 30/128 (23%), Positives = 45/128 (35%), Gaps = 39/128 (30%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAV-LNNKIISRAGN-------------- 42
           +   + FM+ AL  A+ +      P   VGA  V  N  I+    N              
Sbjct: 67  LSWDDYFMAIALLSAERSKD----PNRQVGACLVSKNGIILGIGYNGFPRGCSDDDLPWA 122

Query: 43  RNRELKDVT-------AHAEILAI---RMGCRILSQEILPEVDLYVTLEPCTMCAAAISL 92
           +  +  D          HAE+ AI        +  +       LYVT+ PC  CA  I L
Sbjct: 123 KKSKSGDPLETKYPYVCHAEVNAILNTNHASAVGQR-------LYVTMFPCNECAKIIIL 175

Query: 93  ARIRRLYY 100
           + +  + Y
Sbjct: 176 SGVSEVIY 183


>gi|9630421|ref|NP_046853.1| gp36.1 [Mycobacterium phage D29]
 gi|6014935|sp|O22000|DCTD_BPMD2 RecName: Full=Deoxycytidylate deaminase; AltName: Full=dCMP
           deaminase
 gi|3172285|gb|AAC18478.1| putative deoxycytidinylate deaminase [Mycobacterium phage D29]
          Length = 128

 Score = 62.6 bits (152), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 30/123 (24%), Positives = 41/123 (33%), Gaps = 31/123 (25%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGN-------------RNRE---- 46
              F+  A   AQ +       VGAV V + ++     N             R       
Sbjct: 7   DEYFLGIATAAAQRSDCERSK-VGAVVVKDRRVRGTGYNGAPAGAAGCSTCPRRLSGAVP 65

Query: 47  -----LKDVTA----HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRR 97
                    T     HAE  A+        +E L    LYVT EPC  C+  I+ + I R
Sbjct: 66  GVSDYSSGATRCVAVHAEANAL----LYCDREDLIGATLYVTREPCYACSNLIAASGIER 121

Query: 98  LYY 100
           + Y
Sbjct: 122 VVY 124


>gi|195027988|ref|XP_001986864.1| GH20299 [Drosophila grimshawi]
 gi|193902864|gb|EDW01731.1| GH20299 [Drosophila grimshawi]
          Length = 356

 Score = 62.6 bits (152), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 16/66 (24%), Positives = 34/66 (51%), Gaps = 1/66 (1%)

Query: 64  RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123
                 +    D+Y+  EPC MCA A+  +R+RR+++   + + G + +  Q + +   +
Sbjct: 287 AKYGPYLCTGYDVYLLREPCLMCAMALVHSRVRRIFFLELS-RNGALASTFQLHAVKELN 345

Query: 124 HSPEIY 129
           H  E++
Sbjct: 346 HHYEVF 351


>gi|329767199|ref|ZP_08258726.1| ComE operon protein 2 [Gemella haemolysans M341]
 gi|328836866|gb|EGF86513.1| ComE operon protein 2 [Gemella haemolysans M341]
          Length = 153

 Score = 62.6 bits (152), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 26/116 (22%), Positives = 40/116 (34%), Gaps = 18/116 (15%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNR---------------NR 45
           +     FM+ +   +  +     + VGA  V + +I+S   N                  
Sbjct: 4   ISWDEYFMAQSHLLSLRSTCSR-LSVGATIVKDKRIVSGGYNGSIKGDEHCIDVGCKVVE 62

Query: 46  ELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
                T HAEI AI    +           +YVT  PC  C  +I  A I+ + Y 
Sbjct: 63  GHCVRTIHAEINAILQCSKFGVGT--EGATIYVTHFPCLNCTKSIIQAGIKEICYA 116


>gi|241889824|ref|ZP_04777122.1| ComE operon protein 2 [Gemella haemolysans ATCC 10379]
 gi|241863446|gb|EER67830.1| ComE operon protein 2 [Gemella haemolysans ATCC 10379]
          Length = 153

 Score = 62.6 bits (152), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 26/116 (22%), Positives = 40/116 (34%), Gaps = 18/116 (15%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNR---------------NR 45
           +     FM+ +   +  +     + VGA  V + +I+S   N                  
Sbjct: 4   ISWDEYFMAQSHLLSLRSTCSR-LSVGATIVKDKRIVSGGYNGSIKGDEHCIDVGCKVVE 62

Query: 46  ELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
                T HAEI AI    +           +YVT  PC  C  +I  A I+ + Y 
Sbjct: 63  GHCVRTIHAEINAILQCSKFGVGT--EGATIYVTHFPCLNCTKSIIQAGIKEICYA 116


>gi|328957258|ref|YP_004374644.1| enzyme associated to DNA transport (competence) [Carnobacterium sp.
           17-4]
 gi|328673582|gb|AEB29628.1| enzyme associated to DNA transport (competence) [Carnobacterium sp.
           17-4]
          Length = 172

 Score = 62.6 bits (152), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 25/91 (27%), Positives = 35/91 (38%), Gaps = 19/91 (20%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKDV----------------TAHAEILAIRMGCRILSQE 69
           VGA  V   +II+   N +    D                 T HAE+ AI    +  +Q 
Sbjct: 31  VGATIVREKRIIAGGYNGSVS-GDAHCIDDGCYIVDGHCLRTIHAEMNAILQCAKFGAQT 89

Query: 70  ILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
                ++YVT  PC  C   I  A I ++ Y
Sbjct: 90  --EGAEIYVTHFPCLQCTKMIIQAGITKINY 118


>gi|125975082|ref|YP_001038992.1| CMP/dCMP deaminase, zinc-binding [Clostridium thermocellum ATCC
           27405]
 gi|281418500|ref|ZP_06249519.1| CMP/dCMP deaminase zinc-binding [Clostridium thermocellum JW20]
 gi|125715307|gb|ABN53799.1| CMP/dCMP deaminase, zinc-binding protein [Clostridium thermocellum
           ATCC 27405]
 gi|281407584|gb|EFB37843.1| CMP/dCMP deaminase zinc-binding [Clostridium thermocellum JW20]
 gi|316939247|gb|ADU73281.1| CMP/dCMP deaminase zinc-binding protein [Clostridium thermocellum
           DSM 1313]
          Length = 153

 Score = 62.6 bits (152), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 24/99 (24%), Positives = 37/99 (37%), Gaps = 27/99 (27%)

Query: 26  VGAVAVLNNKIISRAGN------------------------RNRELKDVTAHAEILAIRM 61
           VGA+ V + +I++   N                        +  EL     HAE  AI  
Sbjct: 27  VGALIVKDKRILATGYNGAPMGCKHCSEIGCLREKLNVPSGQRHELCRAI-HAEQNAIVQ 85

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
                S   +    LYVT +PC +CA     A I+++ +
Sbjct: 86  AA--YSGTSVNGGTLYVTTQPCILCAKMAINAGIKKIVF 122


>gi|300172852|ref|YP_003772017.1| ComE operon protein 2 [Leuconostoc gasicomitatum LMG 18811]
 gi|299887230|emb|CBL91198.1| ComE operon protein 2 [Leuconostoc gasicomitatum LMG 18811]
          Length = 160

 Score = 62.6 bits (152), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 23/90 (25%), Positives = 36/90 (40%), Gaps = 17/90 (18%)

Query: 26  VGAVAVLNNKIISRAGNRNRE-------------LKDVTA--HAEILAIRMGCRILSQEI 70
           VGAV V NN+IIS   N +                       HAE  A+    ++     
Sbjct: 30  VGAVIVQNNRIISSGYNGSVSGTPHCTDVGDLIVDGHCIRAVHAEQNALMQAAQMGIS-- 87

Query: 71  LPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
           +   ++YVT  PC  C   +  A I+++ +
Sbjct: 88  VDGAEVYVTDVPCVHCTKLLLQAGIQKINF 117


>gi|54302697|ref|YP_132690.1| putative deoxycytidylate deaminase [Photobacterium profundum SS9]
 gi|90414645|ref|ZP_01222617.1| putative deoxycytidylate deaminase [Photobacterium profundum 3TCK]
 gi|46916121|emb|CAG22890.1| putative deoxycytidylate deaminase [Photobacterium profundum SS9]
 gi|90324278|gb|EAS40850.1| putative deoxycytidylate deaminase [Photobacterium profundum 3TCK]
          Length = 149

 Score = 62.6 bits (152), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 27/86 (31%), Positives = 37/86 (43%), Gaps = 18/86 (20%)

Query: 26  VGAVAVLNNKIISRAGN---------RNRELKDV----TAHAEILAIRMGCRILSQEILP 72
           VGAV   +N+I+S   N          N + +D+    T HAE  AI    R      L 
Sbjct: 27  VGAVITEHNRIVSVGFNGYPHGISDSANTDDRDMKLLKTLHAEENAILFAKR-----DLS 81

Query: 73  EVDLYVTLEPCTMCAAAISLARIRRL 98
             +++VT  PC  CAA I    I  +
Sbjct: 82  GCEIWVTHFPCPNCAAKIIQTGISMV 107


>gi|317142986|ref|XP_001819233.2| deoxycytidylate deaminase [Aspergillus oryzae RIB40]
          Length = 351

 Score = 62.6 bits (152), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 28/122 (22%), Positives = 35/122 (28%), Gaps = 31/122 (25%)

Query: 4   GNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGN-------RNRELKDV---- 50
              FM  A   AQ +    R    VG V V   ++IS   N          E        
Sbjct: 194 DQYFMQLASLAAQRSNCMKRR---VGCVLVRECRVISTGYNGTPRHLRNCNEAGCPRCNR 250

Query: 51  ------------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98
                         HAE  A+    R   +E      LY    PC  C   I+   I  +
Sbjct: 251 GEGGGVGLSTCLCLHAEENALLEAGRERIRE---GTILYCDTCPCLTCTVKIAQVGISEV 307

Query: 99  YY 100
            Y
Sbjct: 308 VY 309


>gi|302858549|gb|ADL71295.1| gp35 [Mycobacterium phage Eagle]
          Length = 158

 Score = 62.6 bits (152), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 28/121 (23%), Positives = 40/121 (33%), Gaps = 30/121 (24%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGN-------------RNRELKDV 50
              F+  A   A+ +       VGAV V + ++     N             R R   D 
Sbjct: 6   DEYFLGIARAVAERSDCERSK-VGAVVVKDRRVRGTGYNGAPAGRPGCGSCPRRRSSVDP 64

Query: 51  TA------------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98
            +            HAE  A+        +E L    LY+T EPC  C   I  A + R+
Sbjct: 65  GSGYDSGPGRCVAVHAEANAL----LHCDREDLVGATLYITREPCNGCLKLIEAAGVARV 120

Query: 99  Y 99
            
Sbjct: 121 V 121


>gi|29366796|ref|NP_813736.1| gp20 [Streptomyces phage phiBT1]
 gi|29243116|emb|CAD80144.1| gp20 [Streptomyces phage phiBT1]
          Length = 116

 Score = 62.6 bits (152), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 30/102 (29%), Positives = 34/102 (33%), Gaps = 32/102 (31%)

Query: 26  VGAVAV-LNNKIISRAGN-------------------------RNRELK-DVTA-HAEIL 57
           VGAV V  NN++     N                                + TA HAE  
Sbjct: 12  VGAVLVNANNEVRGTGYNGAPSGVPGCASAGACPRGRLSAVECAPNSDYANCTADHAERN 71

Query: 58  AIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLY 99
           AIR          LP   LY T EPC  C   I  A IRR+ 
Sbjct: 72  AIRHAPAA----ELPGSTLYTTREPCPACWTLIRAAGIRRVV 109


>gi|297627300|ref|YP_003689063.1| riboflavin-specific deaminase
           (diaminohydroxyphosphoribosylaminopyrimidine deaminase)
           (5-amino-6-(5-phosphoribosylamino)uracil reductase)
           [Propionibacterium freudenreichii subsp. shermanii
           CIRM-BIA1]
 gi|296923065|emb|CBL57649.1| Riboflavin-specific deaminase
           (diaminohydroxyphosphoribosylaminopyrimidine deaminase)
           (5-amino-6-(5-phosphoribosylamino)uracil reductase)
           [Propionibacterium freudenreichii subsp. shermanii
           CIRM-BIA1]
          Length = 406

 Score = 62.6 bits (152), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 29/148 (19%), Positives = 51/148 (34%), Gaps = 19/148 (12%)

Query: 8   MSCALEEAQNAALRNEIP-VGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           +  A E +      +  P VG V +  +  +I+   +R        A        +    
Sbjct: 67  LRRAFELSARGPADDPNPRVGCVLLAPDGGVIAEGWHRGAGTAHAEA------AALAAAR 120

Query: 66  LSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
                +      V+LEPC        CA A++ A I R+ +   +P       GTQ    
Sbjct: 121 AVGSDVRGATAVVSLEPCAHWGRTGPCAVALADAGITRVVFSVPDPNPVAAG-GTQVLRE 179

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKE 147
                  E+  G++E   R+ + D+   
Sbjct: 180 RG----VEVIGGVAEASGREALGDWLAR 203


>gi|225557684|gb|EEH05969.1| deoxycytidylate deaminase [Ajellomyces capsulatus G186AR]
          Length = 356

 Score = 62.6 bits (152), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 28/122 (22%), Positives = 37/122 (30%), Gaps = 31/122 (25%)

Query: 4   GNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGNRN-RELKDV---------- 50
              FM  A   AQ +    R    VG V V   +++S   N   R  K+           
Sbjct: 187 DQYFMQLASLAAQRSNCMKRR---VGCVLVRGRRVMSTGYNGTPRNTKNCNEGGCPRCNC 243

Query: 51  ------------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98
                         HAE  A+    R    E      LY    PC  C+  I+   I  +
Sbjct: 244 GEGGGAALSTCLCIHAEENALLEAGRERIGE---GATLYCNTCPCLTCSVKIAQLGISEV 300

Query: 99  YY 100
            Y
Sbjct: 301 VY 302


>gi|325095421|gb|EGC48731.1| deoxycytidylate deaminase [Ajellomyces capsulatus H88]
          Length = 356

 Score = 62.6 bits (152), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 28/122 (22%), Positives = 37/122 (30%), Gaps = 31/122 (25%)

Query: 4   GNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGNRN-RELKDV---------- 50
              FM  A   AQ +    R    VG V V   +++S   N   R  K+           
Sbjct: 187 DQYFMQLASLAAQRSNCMKRR---VGCVLVRGRRVMSTGYNGTPRNTKNCNEGGCPRCNC 243

Query: 51  ------------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98
                         HAE  A+    R    E      LY    PC  C+  I+   I  +
Sbjct: 244 GEGGGAALSTCLCIHAEENALLEAGRERIGE---GATLYCNTCPCLTCSVKIAQLGISEV 300

Query: 99  YY 100
            Y
Sbjct: 301 VY 302


>gi|195487415|ref|XP_002091899.1| GE11982 [Drosophila yakuba]
 gi|194178000|gb|EDW91611.1| GE11982 [Drosophila yakuba]
          Length = 360

 Score = 62.6 bits (152), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 15/66 (22%), Positives = 32/66 (48%), Gaps = 1/66 (1%)

Query: 64  RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123
                 +    D+Y+  EPC MC+ A+  +R +R+++   N   G +    Q +++   +
Sbjct: 285 AKFGPYLCTGYDVYLLQEPCLMCSMALVHSRAKRVFF-VKNSDNGALATRFQLHSVRELN 343

Query: 124 HSPEIY 129
           H  E++
Sbjct: 344 HHYEVF 349


>gi|194881131|ref|XP_001974702.1| GG21908 [Drosophila erecta]
 gi|190657889|gb|EDV55102.1| GG21908 [Drosophila erecta]
          Length = 360

 Score = 62.6 bits (152), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 15/66 (22%), Positives = 32/66 (48%), Gaps = 1/66 (1%)

Query: 64  RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123
                 +    D+Y+  EPC MC+ A+  +R +R+++   N   G +    Q +++   +
Sbjct: 285 AKFGPYLCTGYDVYLLQEPCLMCSMALVHSRAKRVFF-VKNSDNGALATRFQLHSVRELN 343

Query: 124 HSPEIY 129
           H  E++
Sbjct: 344 HHYEVF 349


>gi|126701100|ref|YP_001089997.1| putative cytidine and deoxycytidylate deaminase [Clostridium
           difficile 630]
 gi|254977101|ref|ZP_05273573.1| putative cytidine and deoxycytidylate deaminase [Clostridium
           difficile QCD-66c26]
 gi|255094429|ref|ZP_05323907.1| putative cytidine and deoxycytidylate deaminase [Clostridium
           difficile CIP 107932]
 gi|255102686|ref|ZP_05331663.1| putative cytidine and deoxycytidylate deaminase [Clostridium
           difficile QCD-63q42]
 gi|255308507|ref|ZP_05352678.1| putative cytidine and deoxycytidylate deaminase [Clostridium
           difficile ATCC 43255]
 gi|255316181|ref|ZP_05357764.1| putative cytidine and deoxycytidylate deaminase [Clostridium
           difficile QCD-76w55]
 gi|255518842|ref|ZP_05386518.1| putative cytidine and deoxycytidylate deaminase [Clostridium
           difficile QCD-97b34]
 gi|255652021|ref|ZP_05398923.1| putative cytidine and deoxycytidylate deaminase [Clostridium
           difficile QCD-37x79]
 gi|255657431|ref|ZP_05402840.1| putative cytidine and deoxycytidylate deaminase [Clostridium
           difficile QCD-23m63]
 gi|260684996|ref|YP_003216281.1| putative cytidine and deoxycytidylate deaminase [Clostridium
           difficile CD196]
 gi|260688654|ref|YP_003219788.1| putative cytidine and deoxycytidylate deaminase [Clostridium
           difficile R20291]
 gi|296449027|ref|ZP_06890817.1| cytidine/deoxycytidylate deaminase [Clostridium difficile NAP08]
 gi|296879850|ref|ZP_06903823.1| cytidine/deoxycytidylate deaminase [Clostridium difficile NAP07]
 gi|306521763|ref|ZP_07408110.1| putative cytidine and deoxycytidylate deaminase [Clostridium
           difficile QCD-32g58]
 gi|115252537|emb|CAJ70380.1| putative dCMP deaminase [Clostridium difficile]
 gi|260211159|emb|CBA66608.1| putative cytidine and deoxycytidylate deaminase [Clostridium
           difficile CD196]
 gi|260214671|emb|CBE07302.1| putative cytidine and deoxycytidylate deaminase [Clostridium
           difficile R20291]
 gi|296262120|gb|EFH08925.1| cytidine/deoxycytidylate deaminase [Clostridium difficile NAP08]
 gi|296429139|gb|EFH15013.1| cytidine/deoxycytidylate deaminase [Clostridium difficile NAP07]
          Length = 145

 Score = 62.6 bits (152), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 28/120 (23%), Positives = 41/120 (34%), Gaps = 26/120 (21%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGN--------------RNRELKD 49
              FM  A    + +       VGAV V + +I++   N              + +EL  
Sbjct: 6   DEYFMEIAEVVKKRSTCIR-RQVGAVIVRDKQILTTGYNGSPRNLEHCENIGCKRQELNI 64

Query: 50  VTA---------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
            +          HAE  AI           +    LYVT  PC +CA     A I ++ Y
Sbjct: 65  PSGERHELCRALHAEQNAIIQAAHNGIS--VDGATLYVTTRPCVLCAKMCINAGILKIVY 122


>gi|221480648|gb|EEE19095.1| deoxycytidylate deaminase, putative [Toxoplasma gondii GT1]
 gi|221501404|gb|EEE27182.1| deoxycytidylate deaminase, putative [Toxoplasma gondii VEG]
          Length = 180

 Score = 62.6 bits (152), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 25/111 (22%), Positives = 38/111 (34%), Gaps = 29/111 (26%)

Query: 26  VGAVAVLNNKIISRAGNRNREL------------KDVT------------AHAEILAIRM 61
           VGA+    N++I+   N                  D +             HAE  A+  
Sbjct: 45  VGAIVARGNRVIATGYNGTPSQAANCNAGGCARCNDPSVSQGRALEACECIHAEANALLE 104

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG-ASNPKGGGIE 111
             R    +      LYVT  PC  CA  +  + IR + Y    + K G ++
Sbjct: 105 AGR----DRAMNGTLYVTCLPCLGCAKLVVQSAIRTVVYAEEYDDKSGALD 151


>gi|162447679|ref|YP_001620811.1| deoxycytidylate deaminase [Acholeplasma laidlawii PG-8A]
 gi|161985786|gb|ABX81435.1| deoxycytidylate deaminase [Acholeplasma laidlawii PG-8A]
          Length = 158

 Score = 62.6 bits (152), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 31/129 (24%), Positives = 49/129 (37%), Gaps = 31/129 (24%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNK-IISRAGN-------------R 43
           +     FM  A    + +ALR++ P   VGA  +  ++ I++   N             +
Sbjct: 7   ISWDQYFMGVA----KLSALRSKDPNTQVGACIINPDRRIVAIGYNGLPMGLSDDEDFWQ 62

Query: 44  NRELKDVTA-----HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98
             E    +      HAE  AI           L +  LYVTL PC  C   +  A ++ +
Sbjct: 63  KNEDYSKSKYAYVVHAEANAILNA-----TTSLKDATLYVTLFPCNECMKLLVQAGVKEI 117

Query: 99  YYGASNPKG 107
            Y +   KG
Sbjct: 118 VYMSDKDKG 126


>gi|302907570|ref|XP_003049675.1| predicted protein [Nectria haematococca mpVI 77-13-4]
 gi|256730611|gb|EEU43962.1| predicted protein [Nectria haematococca mpVI 77-13-4]
          Length = 433

 Score = 62.6 bits (152), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 30/169 (17%), Positives = 55/169 (32%), Gaps = 55/169 (32%)

Query: 2   KKGNVFMSCALEEAQNAALRN-EIPVGAVAVLNN----KIISRAGNRNR--------ELK 48
           +  +V+M+ A   A  A        +GAV V  +    +++  AG+  R           
Sbjct: 223 EDASVWMALAHRVALQAKEAGIGEAMGAVIVQRDAGKVELVGLAGDARRHQECGLLDGTS 282

Query: 49  DVTAHAEILAI------------RMGCRILSQEILP------------------------ 72
           +   H  + AI            R     +    L                         
Sbjct: 283 NPMTHCVVRAISMVAQKLVRHERRAAGLPVQTPNLEYDAFQDGPLLEIEKQCFEQEHPNK 342

Query: 73  ------EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
                  ++LYVT EPC  C+  I  +R+ ++ +    P+ GG+ +  +
Sbjct: 343 DGYLCHGLELYVTHEPCVSCSMGILHSRMGKVVFATHMPRSGGLSSDDR 391


>gi|115450331|ref|NP_001048766.1| Os03g0117200 [Oryza sativa Japonica Group]
 gi|108705865|gb|ABF93660.1| riboflavin biosynthesis protein RibD containing protein, expressed
           [Oryza sativa Japonica Group]
 gi|113547237|dbj|BAF10680.1| Os03g0117200 [Oryza sativa Japonica Group]
 gi|215687333|dbj|BAG91867.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 423

 Score = 62.6 bits (152), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 31/150 (20%), Positives = 59/150 (39%), Gaps = 22/150 (14%)

Query: 4   GNVFMSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
              +M   +E A+ AA      P VG V V + +++    +     K    HAE+ A+R 
Sbjct: 78  DGHYMRRCVELARKAAGHTSPNPMVGCVVVRDGRVVGEGFH----PKAGQPHAEVFALRD 133

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
              +           YV+LEPC        C  A+  A+++ +  G ++P       G +
Sbjct: 134 AGDLAEN-----ATAYVSLEPCNHYGRTPPCTEALINAKVKDVVVGMTDPNPIVASKGIE 188

Query: 116 FYTLATCHHSPEIYPGISEQR-SRQIIQDF 144
               A      ++   + E+   R++ + +
Sbjct: 189 RLRSAG----IDVRLCVDEEASCRKLNEAY 214


>gi|84385224|ref|ZP_00988256.1| putative deoxycytidylate deaminase [Vibrio splendidus 12B01]
 gi|86145748|ref|ZP_01064077.1| putative deoxycytidylate deaminase [Vibrio sp. MED222]
 gi|218676904|ref|YP_002395723.1| putative deoxycytidylate deaminase [Vibrio splendidus LGP32]
 gi|84379821|gb|EAP96672.1| putative deoxycytidylate deaminase [Vibrio splendidus 12B01]
 gi|85836447|gb|EAQ54576.1| putative deoxycytidylate deaminase [Vibrio sp. MED222]
 gi|218325172|emb|CAV27073.1| putative deoxycytidylate deaminase [Vibrio splendidus LGP32]
          Length = 147

 Score = 62.6 bits (152), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 25/86 (29%), Positives = 32/86 (37%), Gaps = 18/86 (20%)

Query: 26  VGAVAVLNNKIISRAGN-------------RNRELKDVTAHAEILAIRMGCRILSQEILP 72
           VGAV   +N+I+S   N                     T HAE  AI    R      L 
Sbjct: 27  VGAVITKHNRIVSVGFNGYPHGVSDSADTDDREMKYLKTLHAEENAILFAKR-----DLD 81

Query: 73  EVDLYVTLEPCTMCAAAISLARIRRL 98
             +++VT  PC  CAA I    I  +
Sbjct: 82  SCEVWVTHFPCPNCAAKIIQTGISAV 107


>gi|167038484|ref|YP_001666062.1| CMP/dCMP deaminase [Thermoanaerobacter pseudethanolicus ATCC 33223]
 gi|167038773|ref|YP_001661758.1| CMP/dCMP deaminase [Thermoanaerobacter sp. X514]
 gi|166853013|gb|ABY91422.1| CMP/dCMP deaminase, zinc-binding [Thermoanaerobacter sp. X514]
 gi|166857318|gb|ABY95726.1| CMP/dCMP deaminase, zinc-binding [Thermoanaerobacter
           pseudethanolicus ATCC 33223]
          Length = 149

 Score = 62.6 bits (152), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 25/98 (25%), Positives = 36/98 (36%), Gaps = 25/98 (25%)

Query: 26  VGAVAVLNNKIISRAGN--------------RNRELKDVTA---------HAEILAIRMG 62
           VGA+ V++  IIS   N                 +L   +          HAE  AI   
Sbjct: 27  VGAILVVDKHIISTGYNGPPTGLAHCEETGCLREQLGIPSGERPELCRGVHAEQNAIIQA 86

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
              L         LYV+  PC +CA  +  A ++R+ Y
Sbjct: 87  A--LHGVSTKGATLYVSASPCVICAKMLINAGVKRIVY 122


>gi|238501998|ref|XP_002382233.1| deoxycytidylate deaminase, putative [Aspergillus flavus NRRL3357]
 gi|220692470|gb|EED48817.1| deoxycytidylate deaminase, putative [Aspergillus flavus NRRL3357]
          Length = 343

 Score = 62.6 bits (152), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 28/122 (22%), Positives = 35/122 (28%), Gaps = 31/122 (25%)

Query: 4   GNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGN-------RNRELKDV---- 50
              FM  A   AQ +    R    VG V V   ++IS   N          E        
Sbjct: 194 DQYFMQLASLAAQRSNCMKRR---VGCVLVRECRVISTGYNGTPRHLRNCNEAGCPRCNR 250

Query: 51  ------------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98
                         HAE  A+    R   +E      LY    PC  C   I+   I  +
Sbjct: 251 GEGGGVGLSTCLCLHAEENALLEAGRERIRE---GTILYCDTCPCLTCTVKIAQVGISEV 307

Query: 99  YY 100
            Y
Sbjct: 308 VY 309


>gi|317028119|ref|XP_001400617.2| deoxycytidylate deaminase [Aspergillus niger CBS 513.88]
          Length = 349

 Score = 62.6 bits (152), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 28/122 (22%), Positives = 36/122 (29%), Gaps = 31/122 (25%)

Query: 4   GNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGN-------RNRELKDV---- 50
              FM  A   AQ +    R    VG V V + ++IS   N          E        
Sbjct: 194 DQYFMELASLAAQRSNCMKRR---VGCVLVRDRRVISTGYNGTPRHIRNCNEGGCPRCNR 250

Query: 51  ------------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98
                         HAE  A+    R   +E      LY    PC  C   I+   I  +
Sbjct: 251 GEGGGVGLSTCLCLHAEENALLEAGRERIRE---GAILYCDTCPCLTCTVKITQVGITEV 307

Query: 99  YY 100
            Y
Sbjct: 308 VY 309


>gi|254497578|ref|ZP_05110366.1| riboflavin biosynthesis protein RibD [Legionella drancourtii
           LLAP12]
 gi|254353194|gb|EET11941.1| riboflavin biosynthesis protein RibD [Legionella drancourtii
           LLAP12]
          Length = 351

 Score = 62.6 bits (152), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 31/112 (27%), Positives = 44/112 (39%), Gaps = 18/112 (16%)

Query: 4   GNVFMSCALEEAQ--NAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
              F+  ALE+A+           VGAVAV N  II++  +        T HAE L +  
Sbjct: 2   HKKFLLAALEQARLGQGFCAPNPCVGAVAVQNGNIIAQTCHH----GAGTPHAEQLLL-- 55

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAIS-LARIRRLYYGASNPK 106
                     P V LY++LEPC        C   I     I  + +  ++P 
Sbjct: 56  ---AQIPPKTPGVSLYISLEPCNHWGRTPPCVDVIINHGGIEHVIFAYADPN 104


>gi|222624084|gb|EEE58216.1| hypothetical protein OsJ_09181 [Oryza sativa Japonica Group]
          Length = 396

 Score = 62.6 bits (152), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 31/150 (20%), Positives = 59/150 (39%), Gaps = 22/150 (14%)

Query: 4   GNVFMSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
              +M   +E A+ AA      P VG V V + +++    +     K    HAE+ A+R 
Sbjct: 51  DGHYMRRCVELARKAAGHTSPNPMVGCVVVRDGRVVGEGFH----PKAGQPHAEVFALRD 106

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
              +           YV+LEPC        C  A+  A+++ +  G ++P       G +
Sbjct: 107 AGDLAEN-----ATAYVSLEPCNHYGRTPPCTEALINAKVKDVVVGMTDPNPIVASKGIE 161

Query: 116 FYTLATCHHSPEIYPGISEQR-SRQIIQDF 144
               A      ++   + E+   R++ + +
Sbjct: 162 RLRSAG----IDVRLCVDEEASCRKLNEAY 187


>gi|69247261|ref|ZP_00604279.1| Cytidine/deoxycytidylate deaminase, zinc-binding region
           [Enterococcus faecium DO]
 gi|257878126|ref|ZP_05657779.1| cytidine/deoxycytidylate deaminase [Enterococcus faecium 1,230,933]
 gi|257881089|ref|ZP_05660742.1| cytidine/deoxycytidylate deaminase [Enterococcus faecium 1,231,502]
 gi|257884751|ref|ZP_05664404.1| cytidine/deoxycytidylate deaminase [Enterococcus faecium 1,231,501]
 gi|257889675|ref|ZP_05669328.1| cytidine/deoxycytidylate deaminase [Enterococcus faecium 1,231,410]
 gi|257892388|ref|ZP_05672041.1| cytidine/deoxycytidylate deaminase [Enterococcus faecium 1,231,408]
 gi|258616373|ref|ZP_05714143.1| comE operon protein 2, putative [Enterococcus faecium DO]
 gi|260559174|ref|ZP_05831360.1| cytidine/deoxycytidylate deaminase [Enterococcus faecium C68]
 gi|261207708|ref|ZP_05922393.1| cytidine/deoxycytidylate deaminase [Enterococcus faecium TC 6]
 gi|289566284|ref|ZP_06446715.1| ComE operon protein 2 [Enterococcus faecium D344SRF]
 gi|293552881|ref|ZP_06673539.1| ComE operon protein 2 [Enterococcus faecium E1039]
 gi|293563910|ref|ZP_06678333.1| ComE operon protein 2 [Enterococcus faecium E1162]
 gi|293569408|ref|ZP_06680705.1| dCMP deaminase [Enterococcus faecium E1071]
 gi|294615862|ref|ZP_06695704.1| ComE operon protein 2 [Enterococcus faecium E1636]
 gi|294617297|ref|ZP_06696938.1| putative competence protein [Enterococcus faecium E1679]
 gi|294623507|ref|ZP_06702355.1| ComE operon protein 2 [Enterococcus faecium U0317]
 gi|314937547|ref|ZP_07844875.1| ComE operon protein 2 [Enterococcus faecium TX0133a04]
 gi|314941461|ref|ZP_07848350.1| ComE operon protein 2 [Enterococcus faecium TX0133C]
 gi|314949641|ref|ZP_07852962.1| ComE operon protein 2 [Enterococcus faecium TX0082]
 gi|314951823|ref|ZP_07854861.1| ComE operon protein 2 [Enterococcus faecium TX0133A]
 gi|314992768|ref|ZP_07858172.1| ComE operon protein 2 [Enterococcus faecium TX0133B]
 gi|314996525|ref|ZP_07861563.1| ComE operon protein 2 [Enterococcus faecium TX0133a01]
 gi|68194934|gb|EAN09403.1| Cytidine/deoxycytidylate deaminase, zinc-binding region
           [Enterococcus faecium DO]
 gi|257812354|gb|EEV41112.1| cytidine/deoxycytidylate deaminase [Enterococcus faecium 1,230,933]
 gi|257816747|gb|EEV44075.1| cytidine/deoxycytidylate deaminase [Enterococcus faecium 1,231,502]
 gi|257820589|gb|EEV47737.1| cytidine/deoxycytidylate deaminase [Enterococcus faecium 1,231,501]
 gi|257826035|gb|EEV52661.1| cytidine/deoxycytidylate deaminase [Enterococcus faecium 1,231,410]
 gi|257828767|gb|EEV55374.1| cytidine/deoxycytidylate deaminase [Enterococcus faecium 1,231,408]
 gi|260074931|gb|EEW63247.1| cytidine/deoxycytidylate deaminase [Enterococcus faecium C68]
 gi|260078091|gb|EEW65797.1| cytidine/deoxycytidylate deaminase [Enterococcus faecium TC 6]
 gi|289161924|gb|EFD09793.1| ComE operon protein 2 [Enterococcus faecium D344SRF]
 gi|291587934|gb|EFF19785.1| dCMP deaminase [Enterococcus faecium E1071]
 gi|291591248|gb|EFF22915.1| ComE operon protein 2 [Enterococcus faecium E1636]
 gi|291596454|gb|EFF27706.1| putative competence protein [Enterococcus faecium E1679]
 gi|291597101|gb|EFF28304.1| ComE operon protein 2 [Enterococcus faecium U0317]
 gi|291603015|gb|EFF33209.1| ComE operon protein 2 [Enterococcus faecium E1039]
 gi|291604143|gb|EFF33654.1| ComE operon protein 2 [Enterococcus faecium E1162]
 gi|313589311|gb|EFR68156.1| ComE operon protein 2 [Enterococcus faecium TX0133a01]
 gi|313592701|gb|EFR71546.1| ComE operon protein 2 [Enterococcus faecium TX0133B]
 gi|313595997|gb|EFR74842.1| ComE operon protein 2 [Enterococcus faecium TX0133A]
 gi|313599713|gb|EFR78556.1| ComE operon protein 2 [Enterococcus faecium TX0133C]
 gi|313643090|gb|EFS07670.1| ComE operon protein 2 [Enterococcus faecium TX0133a04]
 gi|313643980|gb|EFS08560.1| ComE operon protein 2 [Enterococcus faecium TX0082]
          Length = 179

 Score = 62.6 bits (152), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 28/113 (24%), Positives = 42/113 (37%), Gaps = 20/113 (17%)

Query: 4   GNVFMSCALEEAQNAA-LRNEIPVGAVAVLNNKIISRAGNR---------------NREL 47
              FM+ A+  +  +   R E  VGA  V   +II+   N                    
Sbjct: 28  DQYFMAQAVLLSLRSTCTRLE--VGATLVREKRIIAGGYNGAVSGDVHCIDEGCYVVDGH 85

Query: 48  KDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
              T HAE+ A+   C  L        ++YVT  PC  C  A+  A ++ + Y
Sbjct: 86  CLRTIHAEMNALLQ-CAKLGIPT-EGSEIYVTHFPCLACTKALLQAGVKGINY 136


>gi|259500880|ref|ZP_05743782.1| competence protein ComEB [Lactobacillus iners DSM 13335]
 gi|302190667|ref|ZP_07266921.1| ComE operon protein 2 [Lactobacillus iners AB-1]
 gi|309803656|ref|ZP_07697746.1| putative ComE operon protein 2 [Lactobacillus iners LactinV 11V1-d]
 gi|309805762|ref|ZP_07699799.1| putative ComE operon protein 2 [Lactobacillus iners LactinV 09V1-c]
 gi|309805965|ref|ZP_07699992.1| putative ComE operon protein 2 [Lactobacillus iners LactinV 03V1-b]
 gi|309809164|ref|ZP_07703037.1| putative ComE operon protein 2 [Lactobacillus iners SPIN 2503V10-D]
 gi|312871238|ref|ZP_07731336.1| putative ComE operon protein 2 [Lactobacillus iners LEAF 3008A-a]
 gi|312872692|ref|ZP_07732757.1| putative ComE operon protein 2 [Lactobacillus iners LEAF 2062A-h1]
 gi|312874090|ref|ZP_07734125.1| putative ComE operon protein 2 [Lactobacillus iners LEAF 2052A-d]
 gi|312874953|ref|ZP_07734972.1| putative ComE operon protein 2 [Lactobacillus iners LEAF 2053A-b]
 gi|315654038|ref|ZP_07906954.1| competence protein comEB [Lactobacillus iners ATCC 55195]
 gi|329920925|ref|ZP_08277474.1| putative ComE operon protein 2 [Lactobacillus iners SPIN 1401G]
 gi|259167574|gb|EEW52069.1| competence protein ComEB [Lactobacillus iners DSM 13335]
 gi|308164254|gb|EFO66511.1| putative ComE operon protein 2 [Lactobacillus iners LactinV 11V1-d]
 gi|308164882|gb|EFO67128.1| putative ComE operon protein 2 [Lactobacillus iners LactinV 09V1-c]
 gi|308167647|gb|EFO69799.1| putative ComE operon protein 2 [Lactobacillus iners LactinV 03V1-b]
 gi|308170609|gb|EFO72629.1| putative ComE operon protein 2 [Lactobacillus iners SPIN 2503V10-D]
 gi|311089698|gb|EFQ48123.1| putative ComE operon protein 2 [Lactobacillus iners LEAF 2053A-b]
 gi|311090430|gb|EFQ48839.1| putative ComE operon protein 2 [Lactobacillus iners LEAF 2052A-d]
 gi|311091734|gb|EFQ50113.1| putative ComE operon protein 2 [Lactobacillus iners LEAF 2062A-h1]
 gi|311093252|gb|EFQ51598.1| putative ComE operon protein 2 [Lactobacillus iners LEAF 3008A-a]
 gi|315488734|gb|EFU78380.1| competence protein comEB [Lactobacillus iners ATCC 55195]
 gi|328935490|gb|EGG31961.1| putative ComE operon protein 2 [Lactobacillus iners SPIN 1401G]
          Length = 157

 Score = 62.2 bits (151), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 26/111 (23%), Positives = 42/111 (37%), Gaps = 18/111 (16%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRE---LKD------------ 49
             FM  AL  +Q +     + VG+V V + ++I+   N +       D            
Sbjct: 10  QYFMMQALVISQRSTCDRAL-VGSVLVKDKRMIATGYNGSVTGEPHCDDEGHLMVDGHCV 68

Query: 50  VTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
            T H+E+ A+    +           +YVT  PC  C  A+  A I  + Y
Sbjct: 69  RTIHSEMNALIQCAKNGIST--EGCAIYVTHFPCFNCTKALVQAGIVEVNY 117


>gi|170584686|ref|XP_001897125.1| dCMP deaminase [Brugia malayi]
 gi|158595455|gb|EDP34008.1| dCMP deaminase, putative [Brugia malayi]
          Length = 205

 Score = 62.2 bits (151), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 30/119 (25%), Positives = 40/119 (33%), Gaps = 31/119 (26%)

Query: 5   NVFMSCALEEAQNAALRNEIP---VGAVAVLNNK-IISRAGNRNREL---------KDV- 50
             FM  A   A  +      P   VGAV V  +K I+    N              KD  
Sbjct: 47  EYFMGVAHMAALRSKD----PITQVGAVIVNQDKRIVGSGYNGMPTGCSDDVLPWGKDPE 102

Query: 51  ---------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
                      HAE+ AI    +I+    +    +Y  L PC  CA  I  A I  + +
Sbjct: 103 NFLENKSAYVCHAELNAILN--KIVGS--IKGSTIYTVLFPCNECAKLIIQAGISEVVF 157


>gi|165918851|ref|ZP_02218937.1| cytidine/deoxycytidylate deaminase family protein [Coxiella
          burnetii RSA 334]
 gi|165917483|gb|EDR36087.1| cytidine/deoxycytidylate deaminase family protein [Coxiella
          burnetii RSA 334]
          Length = 92

 Score = 62.2 bits (151), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 19/65 (29%), Positives = 25/65 (38%), Gaps = 16/65 (24%)

Query: 41 GNRNRELKDVTAHAEILAIRMGCRILSQEIL----------------PEVDLYVTLEPCT 84
           N + +  D TAHAE+  IR   R L+   L                    +Y + EPC 
Sbjct: 19 HNHSVDWHDPTAHAEMSVIRKAARELNVTDLGHIRKEDSKLSQPSEWSHCVIYSSAEPCP 78

Query: 85 MCAAA 89
          MC A 
Sbjct: 79 MCMAT 83


>gi|145500018|ref|XP_001435993.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124403130|emb|CAK68596.1| unnamed protein product [Paramecium tetraurelia]
          Length = 256

 Score = 62.2 bits (151), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 24/114 (21%), Positives = 42/114 (36%), Gaps = 14/114 (12%)

Query: 28  AVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRIL-----------SQEILPEVD 75
            +   + N I+  A   +    +   H  ++A+                  SQ    E+ 
Sbjct: 142 CILYNDENTIVIEA--EDETHINNVRHCVMVAMEKLAEHNLNENHQRHFLESQYYAREMT 199

Query: 76  LYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIY 129
           L    EPC MCA A+  +RI  +YY       GG+ +  Q   +   +H   ++
Sbjct: 200 LVTYFEPCIMCAMALIHSRINEVYYYQKRVTDGGLNDQLQVNNMKQLNHKYLVF 253


>gi|162456661|ref|YP_001619028.1| riboflavin biosynthesis protein ribD [Sorangium cellulosum 'So ce
           56']
 gi|161167243|emb|CAN98548.1| Riboflavin biosynthesis protein ribD [Sorangium cellulosum 'So ce
           56']
          Length = 187

 Score = 62.2 bits (151), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 28/130 (21%), Positives = 42/130 (32%), Gaps = 20/130 (15%)

Query: 1   MKKG-NVFMSCALEEAQNA-ALRNEIP-VGAVAV-LNNKIISRAGNRNRELKDVTAHAEI 56
           M      +M  A+EEA+ A     + P VG   V    +++                 E 
Sbjct: 1   MSNDPEKWMRLAIEEAERARGGTGDNPWVGCAIVSAAGELLGSGHTL--------GPGED 52

Query: 57  LAIRMGCRILSQEILP--EVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGG 108
            A     R      L      LY TLEPC        C+ +I    + R+  G ++P   
Sbjct: 53  HAEIAAARAAHARGLSVVGATLYSTLEPCSFHGRTPACSRSIVERGVARVVIGMNDPNPR 112

Query: 109 GIENGTQFYT 118
               G +   
Sbjct: 113 VDGEGVRILR 122


>gi|95929569|ref|ZP_01312311.1| CMP/dCMP deaminase, zinc-binding [Desulfuromonas acetoxidans DSM
           684]
 gi|95134266|gb|EAT15923.1| CMP/dCMP deaminase, zinc-binding [Desulfuromonas acetoxidans DSM
           684]
          Length = 146

 Score = 62.2 bits (151), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 22/105 (20%), Positives = 37/105 (35%), Gaps = 27/105 (25%)

Query: 26  VGAVAVLNNKIISRAGN--------------RNRELKDVTA---------HAEILAIRMG 62
           VGAV V +  +++   N                 +++  +          HAE  AI   
Sbjct: 18  VGAVIVKDKNVLTTGYNGTPSGVRHCQETGCLREKMQVPSGQRHELCRGLHAEQNAIIQA 77

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY--GASNP 105
            +      +    LY T  PC +CA  +  A + R+ Y  G  + 
Sbjct: 78  AKHGVN--ISGGTLYCTNAPCVICAKMLINAGLSRIVYLDGYPDD 120


>gi|311993486|ref|YP_004010351.1| Cd dCMP deaminase [Acinetobacter phage Acj9]
 gi|295917443|gb|ADG60114.1| Cd dCMP deaminase [Acinetobacter phage Acj9]
          Length = 181

 Score = 62.2 bits (151), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 30/116 (25%), Positives = 39/116 (33%), Gaps = 43/116 (37%)

Query: 26  VGAVAVLNNKIISRAGN------------------------------------RNRELKD 49
           VGAV   N +IIS   N                                      R    
Sbjct: 24  VGAVIAKNGRIISTGYNGSPAGGVNCCDHSKEQGWLGFINMHTPQHQRTYLKPECRSDHS 83

Query: 50  V--TA---HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
              +A   HAE+ AI    +      +    +YVTL PC  CA AI+ + IR+L Y
Sbjct: 84  AWSSANEIHAELNAILYAAKNGLA--IDGATMYVTLSPCADCAKAIANSGIRQLVY 137


>gi|312881768|ref|ZP_07741542.1| putative deoxycytidylate deaminase [Vibrio caribbenthicus ATCC
           BAA-2122]
 gi|309370519|gb|EFP97997.1| putative deoxycytidylate deaminase [Vibrio caribbenthicus ATCC
           BAA-2122]
          Length = 153

 Score = 62.2 bits (151), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 25/86 (29%), Positives = 32/86 (37%), Gaps = 18/86 (20%)

Query: 26  VGAVAVLNNKIISRAGN-------------RNRELKDVTAHAEILAIRMGCRILSQEILP 72
           VGAV    N+I+S   N                     T HAE  AI    R      L 
Sbjct: 27  VGAVITQQNRIVSVGFNGYPHGISDSAETDDREMKYLKTLHAEENAILFAKR-----NLD 81

Query: 73  EVDLYVTLEPCTMCAAAISLARIRRL 98
           + +++VT  PC  CAA I    I  +
Sbjct: 82  DCEIWVTHFPCPNCAAKIIQTGICAV 107


>gi|291520267|emb|CBK75488.1| Deoxycytidylate deaminase [Butyrivibrio fibrisolvens 16/4]
          Length = 161

 Score = 62.2 bits (151), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 32/122 (26%), Positives = 44/122 (36%), Gaps = 30/122 (24%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVL-NNKIISRAGNRN-----------R 45
           +     FM  A+     +      P   VGA  V  +NKI+S   N              
Sbjct: 9   ISWDEYFMGVAVLSGMRSKD----PNTQVGACIVSQDNKILSMGYNGFPNGCSDDEFPWA 64

Query: 46  ELKDV-------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98
            + D        T H+E+ AI           L    LYV+L PC  CA AI  + I+ +
Sbjct: 65  RVGDPLENKYFYTTHSELNAILN----YRGGSLEGSKLYVSLFPCNECAKAIIQSGIKTI 120

Query: 99  YY 100
            Y
Sbjct: 121 IY 122


>gi|218191968|gb|EEC74395.1| hypothetical protein OsI_09744 [Oryza sativa Indica Group]
          Length = 396

 Score = 62.2 bits (151), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 31/150 (20%), Positives = 59/150 (39%), Gaps = 22/150 (14%)

Query: 4   GNVFMSCALEEAQNAALRNEI-P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
              +M   +E A+ AA      P VG V V + +++    +     K    HAE+ A+R 
Sbjct: 51  DGHYMRRCVELARKAAGHTSPNPMVGCVVVRDGRVVGEGFH----PKAGQPHAEVFALRD 106

Query: 62  GCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
              +           YV+LEPC        C  A+  A+++ +  G ++P       G +
Sbjct: 107 AGDLAEN-----ATAYVSLEPCNHYGRTPPCTEALINAKVKDVVVGMTDPNPIVASKGIE 161

Query: 116 FYTLATCHHSPEIYPGISEQR-SRQIIQDF 144
               A      ++   + E+   R++ + +
Sbjct: 162 RLRSAG----IDVRLCVDEEASCRKLNEAY 187


>gi|164659978|ref|XP_001731113.1| hypothetical protein MGL_2112 [Malassezia globosa CBS 7966]
 gi|159105011|gb|EDP43899.1| hypothetical protein MGL_2112 [Malassezia globosa CBS 7966]
          Length = 58

 Score = 62.2 bits (151), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 18/45 (40%), Positives = 27/45 (60%)

Query: 74  VDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
             LYVT+EPC MCA+A+    I+R+ +GA N + GG       ++
Sbjct: 4   TTLYVTIEPCLMCASALRQIGIQRVVFGAGNERFGGNGTVLPIHS 48


>gi|70954102|ref|XP_746114.1| hypothetical protein [Plasmodium chabaudi chabaudi]
 gi|56526631|emb|CAH78767.1| conserved hypothetical protein [Plasmodium chabaudi chabaudi]
          Length = 294

 Score = 62.2 bits (151), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 16/59 (27%), Positives = 34/59 (57%)

Query: 77  YVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQ 135
           Y+T EPC MCA A+  +R++ + +   N + G + +  + + L + +H  ++Y  + E+
Sbjct: 235 YLTHEPCFMCAMAMVHSRVKCVIFDKVNKQNGALFSKGKLHCLKSLNHHFKVYKTVREK 293



 Score = 35.3 bits (81), Expect = 3.1,   Method: Composition-based stats.
 Identities = 11/47 (23%), Positives = 19/47 (40%), Gaps = 3/47 (6%)

Query: 27  GAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM-GCRILSQEILP 72
           G V   N+KII+ +G  +        H+ +LAI      + +     
Sbjct: 127 GCVLTFNDKIIACSG--DNIKNHPLHHSVMLAIEEVAFNLRNIWRFK 171


>gi|312142508|ref|YP_003993954.1| CMP/dCMP deaminase zinc-binding protein [Halanaerobium sp.
           'sapolanicus']
 gi|311903159|gb|ADQ13600.1| CMP/dCMP deaminase zinc-binding protein [Halanaerobium sp.
           'sapolanicus']
          Length = 151

 Score = 62.2 bits (151), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 25/120 (20%), Positives = 40/120 (33%), Gaps = 26/120 (21%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGN--------------RNRELKD 49
              FM  A   A+ A       VGAV V + K+++   N                 EL  
Sbjct: 7   HEYFMEMAKLVAKRATCLRRR-VGAVLVKDRKVLATGYNGAPKDITHCEVTGCLRTELDI 65

Query: 50  VTA---------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
            +          HAE   +        +       +Y T +PC +C   +  A + ++YY
Sbjct: 66  PSGERHEICRGVHAEQNLVAQAAFHGVKT--EGSTVYCTNQPCIICTKILINAGVNKIYY 123


>gi|312880695|ref|ZP_07740495.1| CMP/dCMP deaminase zinc-binding [Aminomonas paucivorans DSM 12260]
 gi|310783986|gb|EFQ24384.1| CMP/dCMP deaminase zinc-binding [Aminomonas paucivorans DSM 12260]
          Length = 170

 Score = 62.2 bits (151), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 26/120 (21%), Positives = 39/120 (32%), Gaps = 26/120 (21%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGN--------------RNRELKD 49
              F+  AL  A  +       VGAV V ++ ++S   N                  L  
Sbjct: 9   DEYFLRIALVVASRSTCLRRH-VGAVIVRDHYMVSTGYNGAPRGVPHCAEVGCLRERLGI 67

Query: 50  VTA---------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
            +          H EI A+     +          LY T EPC+ C  A+    IR + +
Sbjct: 68  PSGERHEMCRGSHGEINALSQAAAMGVST--AGGILYCTHEPCSFCTKALINGGIREMVF 125


>gi|33866124|ref|NP_897683.1| putative diaminohydroxyphosphoribosylaminopyrimidine deaminase and
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Synechococcus sp. WH 8102]
 gi|33639099|emb|CAE08105.1| putative Diaminohydroxyphosphoribosylaminopyrimidine deaminase and
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Synechococcus sp. WH 8102]
          Length = 354

 Score = 62.2 bits (151), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 25/131 (19%), Positives = 42/131 (32%), Gaps = 20/131 (15%)

Query: 26  VGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC- 83
           VGAV +    +++    +          HAE+          +        L VTLEPC 
Sbjct: 26  VGAVVLNREGRLVGEGFHARSGE----PHAEVG-----ALAQAGTAAAGGTLIVTLEPCC 76

Query: 84  -----TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSR 138
                  C+ A+  A + R+     +P       G      A       +  G+  Q + 
Sbjct: 77  HHGRTPPCSRAVLQAGVARVVVALEDPDPRVAGGGIAQLRKAG----VVVITGVLRQEAA 132

Query: 139 QIIQDFFKERR 149
           +  + F    R
Sbjct: 133 EQNRAFLHRVR 143


>gi|197123236|ref|YP_002135187.1| riboflavin biosynthesis protein RibD [Anaeromyxobacter sp. K]
 gi|196173085|gb|ACG74058.1| riboflavin biosynthesis protein RibD [Anaeromyxobacter sp. K]
          Length = 392

 Score = 62.2 bits (151), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 34/149 (22%), Positives = 57/149 (38%), Gaps = 21/149 (14%)

Query: 5   NVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
             FM  A+ EA     R      VGAV V + +++ R  +          HAE++     
Sbjct: 26  ERFMRLAVREAARGLGRTSPNPAVGAVVVRDGRVVGRGHHARAGG----PHAEVV----- 76

Query: 63  CRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116
               +  +    D+Y TLEPC        C+ A+  A +RR++ G+S+P       G   
Sbjct: 77  ALRAAGALARGADVYTTLEPCDHFGKTPPCSVALLEAGVRRVFVGSSDPNPLVNGRGMAR 136

Query: 117 YTLATCHHSPEIYPGISEQRSRQIIQDFF 145
                  H   +  G+      ++   +F
Sbjct: 137 LR----RHGVAVVKGVLRAECDRLNAPWF 161


>gi|121997691|ref|YP_001002478.1| riboflavin biosynthesis protein RibD [Halorhodospira halophila SL1]
 gi|121589096|gb|ABM61676.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase /
           diaminohydroxyphosphoribosylaminopyrimidine deaminase
           [Halorhodospira halophila SL1]
          Length = 371

 Score = 62.2 bits (151), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 25/136 (18%), Positives = 40/136 (29%), Gaps = 35/136 (25%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC--------RILSQEILPEVDLY 77
           VG V V +  +++ A           AH                     +         Y
Sbjct: 34  VGCVLVRDGSVLAEA-----------AH------EQAGGPHAEAAALQAAGGAAHGATAY 76

Query: 78  VTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPG 131
           VTLEPC        CA A+  A + R+  G  +P       G      A       +  G
Sbjct: 77  VTLEPCAHYGRTPPCARALIDAGVSRVVVGHRDPNPRVAGGGIAQLEAAG----VAVTEG 132

Query: 132 ISEQRSRQIIQDFFKE 147
           +    +  + + F + 
Sbjct: 133 VLAADAEALNRGFLRR 148


>gi|326389256|ref|ZP_08210824.1| CMP/dCMP deaminase, zinc-binding [Thermoanaerobacter ethanolicus JW
           200]
 gi|325994619|gb|EGD53043.1| CMP/dCMP deaminase, zinc-binding [Thermoanaerobacter ethanolicus JW
           200]
          Length = 147

 Score = 62.2 bits (151), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 25/98 (25%), Positives = 36/98 (36%), Gaps = 25/98 (25%)

Query: 26  VGAVAVLNNKIISRAGN--------------RNRELKDVTA---------HAEILAIRMG 62
           VGA+ V++  IIS   N                 +L   +          HAE  AI   
Sbjct: 27  VGAILVVDKHIISTGYNGPPTGLAHCEETGCLREQLGIPSGERPELCRGVHAEQNAIIQA 86

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
              L         LYV+  PC +CA  +  A ++R+ Y
Sbjct: 87  A--LHGVSTKGATLYVSASPCVICAKMLINAGVKRIVY 122


>gi|209881015|ref|XP_002141946.1| cytidine/deoxycytidylate deaminase family protein [Cryptosporidium
           muris RN66]
 gi|209557552|gb|EEA07597.1| cytidine/deoxycytidylate deaminase family protein [Cryptosporidium
           muris RN66]
          Length = 380

 Score = 62.2 bits (151), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 29/129 (22%), Positives = 41/129 (31%), Gaps = 45/129 (34%)

Query: 4   GNVFMSCALEEAQNA---ALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTA-------- 52
              FM  A   ++ +     +    VG+V V NN+IIS   N        TA        
Sbjct: 231 DEYFMKLAWLTSKRSNCIRRK----VGSVLVKNNRIISTGYNGT-----PTATTNCFEGG 281

Query: 53  ---------------------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAIS 91
                                HAE   +    +    +   +  LYVT  PC  CA  I 
Sbjct: 282 CIRCTNINVINGTNLEYCNCIHAESNVLFYAGK----DKCEDSILYVTCLPCLTCAKHII 337

Query: 92  LARIRRLYY 100
              I ++ Y
Sbjct: 338 QCGIIKVIY 346


>gi|91088935|ref|XP_973512.1| PREDICTED: similar to Deoxycytidylate deaminase (dCMP deaminase)
           [Tribolium castaneum]
 gi|270011567|gb|EFA08015.1| hypothetical protein TcasGA2_TC005604 [Tribolium castaneum]
          Length = 178

 Score = 62.2 bits (151), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 30/120 (25%), Positives = 40/120 (33%), Gaps = 32/120 (26%)

Query: 4   GNVFMSCALEEAQNAALRNEIP---VGAVAV-LNNKIISRAGNRN------------REL 47
              FMS  L  AQ +      P   VGA  V     +I    N              +  
Sbjct: 17  HEHFMSFCLLAAQRSKD----PCTQVGACVVDRQGNLIGSGYNGMPRGCHDDEFPWGKRS 72

Query: 48  KDVT-------AHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
           +D          HAE+ AI       +   + +  +YVTL PC  CA  I    I  + Y
Sbjct: 73  EDPLENKHLYVCHAELNAI-----ANTTGTMNDCVIYVTLFPCNECAKLIIQNGISEVVY 127


>gi|295109528|emb|CBL23481.1| Deoxycytidylate deaminase [Ruminococcus obeum A2-162]
          Length = 164

 Score = 62.2 bits (151), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 34/122 (27%), Positives = 44/122 (36%), Gaps = 24/122 (19%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGN--------------RNR 45
           +     FM  A+     +   N   VGA  V  +NKI+S   N              R  
Sbjct: 12  ISWDEYFMGVAMLSGMRSKDPNSQ-VGACIVSEDNKILSMGYNGFPKGCSDDEFPWAREG 70

Query: 46  ELKDV----TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
           E  D       H+E+ AI           L    LYV+L PC  CA AI  A I+ + Y 
Sbjct: 71  EPLDTKYLYVTHSELNAILN----YRGGSLEGAKLYVSLFPCNECAKAIIQAGIKTVIYD 126

Query: 102 AS 103
             
Sbjct: 127 CD 128


>gi|256751351|ref|ZP_05492230.1| CMP/dCMP deaminase zinc-binding [Thermoanaerobacter ethanolicus
           CCSD1]
 gi|300913642|ref|ZP_07130959.1| CMP/dCMP deaminase zinc-binding [Thermoanaerobacter sp. X561]
 gi|307723343|ref|YP_003903094.1| CMP/dCMP deaminase zinc-binding protein [Thermoanaerobacter sp.
           X513]
 gi|320116879|ref|YP_004187038.1| CMP/dCMP deaminase zinc-binding protein [Thermoanaerobacter brockii
           subsp. finnii Ako-1]
 gi|256749733|gb|EEU62758.1| CMP/dCMP deaminase zinc-binding [Thermoanaerobacter ethanolicus
           CCSD1]
 gi|300890327|gb|EFK85472.1| CMP/dCMP deaminase zinc-binding [Thermoanaerobacter sp. X561]
 gi|307580404|gb|ADN53803.1| CMP/dCMP deaminase zinc-binding protein [Thermoanaerobacter sp.
           X513]
 gi|319929970|gb|ADV80655.1| CMP/dCMP deaminase zinc-binding protein [Thermoanaerobacter brockii
           subsp. finnii Ako-1]
          Length = 155

 Score = 62.2 bits (151), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 25/98 (25%), Positives = 36/98 (36%), Gaps = 25/98 (25%)

Query: 26  VGAVAVLNNKIISRAGN--------------RNRELKDVTA---------HAEILAIRMG 62
           VGA+ V++  IIS   N                 +L   +          HAE  AI   
Sbjct: 33  VGAILVVDKHIISTGYNGPPTGLAHCEETGCLREQLGIPSGERPELCRGVHAEQNAIIQA 92

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
              L         LYV+  PC +CA  +  A ++R+ Y
Sbjct: 93  A--LHGVSTKGATLYVSASPCVICAKMLINAGVKRIVY 128


>gi|167755827|ref|ZP_02427954.1| hypothetical protein CLORAM_01343 [Clostridium ramosum DSM 1402]
 gi|237734796|ref|ZP_04565277.1| deoxycytidylate deaminase [Mollicutes bacterium D7]
 gi|167704766|gb|EDS19345.1| hypothetical protein CLORAM_01343 [Clostridium ramosum DSM 1402]
 gi|229382124|gb|EEO32215.1| deoxycytidylate deaminase [Coprobacillus sp. D7]
          Length = 154

 Score = 62.2 bits (151), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 34/135 (25%), Positives = 46/135 (34%), Gaps = 34/135 (25%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLN-NKIISRAGN-------------- 42
           +     FM  A   A  +      P   VGA  V   NKI+    N              
Sbjct: 5   INWTQYFMGVAKLSAFRSKD----PNTQVGACIVNEANKIVGVGYNGLPWGCEDNEFPWE 60

Query: 43  ----RNRELKDV-TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRR 97
                  E K     HAE+ AI     + S   L    +YV+L PC  C  AI  + I  
Sbjct: 61  VREGDLYETKYPYVVHAELNAI-----LNSTGQLKGCRIYVSLFPCHECVKAIIQSGISE 115

Query: 98  LYYGASNPKGGGIEN 112
           + Y   + K  G ++
Sbjct: 116 IVY--EDDKYKGTDS 128


>gi|255712643|ref|XP_002552604.1| KLTH0C08756p [Lachancea thermotolerans]
 gi|238933983|emb|CAR22166.1| KLTH0C08756p [Lachancea thermotolerans]
          Length = 610

 Score = 62.2 bits (151), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 36/153 (23%), Positives = 57/153 (37%), Gaps = 26/153 (16%)

Query: 1   MKKGNVFMSCALEEAQN------AALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHA 54
           ++    +M  A+ EA+       A       VGAV   ++K++S   +R         HA
Sbjct: 454 LEPHRKYMEMAINEAKKCGPTTTAFS-----VGAVLTNSDKVLSTGFSRELPGN---THA 505

Query: 55  EILAIRMGCRILSQEIL-PEVDLYVTLEPCT-------MCAAAISLA--RIRRLYYGASN 104
           E  A+           + P   LY T+EPC+        C   I  A   IR ++ G   
Sbjct: 506 EQCALEKYFEQSGNRSVPPGSVLYTTMEPCSFRLSGNKPCVDRIIDASKSIRTVFVGVME 565

Query: 105 PKGGGIENGTQFYTLATCHHSPEIYPGISEQRS 137
           P    ++N T    L+       + PG  E+  
Sbjct: 566 PDT-FVKNNTSKTKLSQHEIDYVLIPGY-EEDC 596


>gi|255101026|ref|ZP_05330003.1| putative phage-related deoxycytidylate deaminase (putative late
           competence protein) [Clostridium difficile QCD-63q42]
          Length = 145

 Score = 62.2 bits (151), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 30/112 (26%), Positives = 43/112 (38%), Gaps = 19/112 (16%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNR-----------ELKDV-- 50
             FM      A+         VGA+ V   N+I+S   N +            E++D   
Sbjct: 13  EYFMRLCETVAERGTCDRAY-VGAIIVNSENRIVSTGYNGSISGDKHCSEVGHEMRDGHC 71

Query: 51  --TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
             T HAE  A+    +      +    +YVT  PC  C  AI  A I+ +YY
Sbjct: 72  IRTIHAEQNALYYCAKEGIS--VKNCSIYVTHFPCLNCTKAIIQAGIKHIYY 121


>gi|6226765|sp|O24750|RIBD_CORAM RecName: Full=Riboflavin biosynthesis protein RibD; Includes:
           RecName:
           Full=Diaminohydroxyphosphoribosylaminopyrimidine
           deaminase; Short=DRAP deaminase; AltName:
           Full=Riboflavin-specific deaminase; Includes: RecName:
           Full=5-amino-6-(5-phosphoribosylamino)uracil reductase;
           AltName: Full=HTP reductase
 gi|21914864|dbj|BAA20053.1| ribG [Corynebacterium ammoniagenes]
          Length = 337

 Score = 62.2 bits (151), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 25/106 (23%), Positives = 38/106 (35%), Gaps = 17/106 (16%)

Query: 25  PVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83
           PVGAV +  + +I+     +         HAE+ A+                  VTLEPC
Sbjct: 38  PVGAVIISTSGEIVGTGATQPVGG----VHAEVQALADAAGKT-----EGATAVVTLEPC 88

Query: 84  TM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123
                   C  A+  A I+ + +  S+P       G Q    A  +
Sbjct: 89  RHTGRTGPCTQALIEAGIKDVLFLHSDPNPSA-GGGEQVLVDAGIN 133


>gi|332980851|ref|YP_004462292.1| CMP/dCMP deaminase zinc-binding protein [Mahella australiensis 50-1
           BON]
 gi|332698529|gb|AEE95470.1| CMP/dCMP deaminase zinc-binding protein [Mahella australiensis 50-1
           BON]
          Length = 170

 Score = 62.2 bits (151), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 21/98 (21%), Positives = 38/98 (38%), Gaps = 25/98 (25%)

Query: 26  VGAVAVLNNKIISRAGN--------------RNRELKDVTA---------HAEILAIRMG 62
           VGA+ V + ++++   N                 ++   +          HAE  AI   
Sbjct: 27  VGAIIVKDKRMLASGYNGAPSGVRHCDEVGCLREQMHIPSGQRQELCRAIHAEQNAIAQA 86

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
              +    + +  +Y+T +PC +CA  I  A I R+ Y
Sbjct: 87  A--MMGISVKDATIYITTQPCAICAKMIINAGITRIVY 122


>gi|300122215|emb|CBK22788.2| unnamed protein product [Blastocystis hominis]
          Length = 288

 Score = 62.2 bits (151), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 26/123 (21%), Positives = 39/123 (31%), Gaps = 31/123 (25%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLN-NKIISRAGN-------------R 43
           +     FM  A   A  +      P   VGA  V   N+I+    N              
Sbjct: 124 ISWDEYFMGLACLSAMRSKD----PNTQVGACIVNAYNQIVGIGYNGFPRGCSDDVLPWS 179

Query: 44  NRELKDV------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRR 97
                ++        HAE+ AI      ++        +YV+L PC  C   I  + I  
Sbjct: 180 REGDNELDTKYMYVCHAEMNAILN----INTANARGCKMYVSLFPCNNCCKMIIQSGIVE 235

Query: 98  LYY 100
           + Y
Sbjct: 236 VIY 238


>gi|261886453|ref|ZP_06010492.1| riboflavin biosynthesis protein RibD [Campylobacter fetus subsp.
           venerealis str. Azul-94]
          Length = 330

 Score = 62.2 bits (151), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 28/150 (18%), Positives = 51/150 (34%), Gaps = 40/150 (26%)

Query: 26  VGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI------------------- 65
           VG V    N +I+S   N + +      HAE+ AI+    +                   
Sbjct: 21  VGCVITGKNGEILSI--NAHEKAGMP--HAELNAIKYALEMKNPAFKQDFDEIKDTNELY 76

Query: 66  -----LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
                    +L     YVTLEPC        CA  +     +++  GA +        G 
Sbjct: 77  NFIMQNHSNLLNGSTAYVTLEPCSHQGRTPPCANLLKELGFKQVIIGAIDSSENAKG-GE 135

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
           Q    +          G+ ++++ ++++ F
Sbjct: 136 QILKNSGIKTKI----GVCKEKADELLEPF 161


>gi|242217142|ref|XP_002474373.1| predicted protein [Postia placenta Mad-698-R]
 gi|220726480|gb|EED80428.1| predicted protein [Postia placenta Mad-698-R]
          Length = 272

 Score = 62.2 bits (151), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 26/117 (22%), Positives = 39/117 (33%), Gaps = 24/117 (20%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGN---------------RNRELK 48
              FM  A E A   +   +  VGA+ V N +I++   N               R    K
Sbjct: 132 DAYFMQLA-ELASERSNCMKRRVGAILVRNKRILATGYNGTPRGLTNCNEGGCTRCNSGK 190

Query: 49  DVTA-----HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
           + +      HAE  A+    R    +      LY    PC  C   I    ++ + Y
Sbjct: 191 EASDECVCLHAEENALLEAGRERVGD---GAVLYCNTCPCLKCTIKIIQTGVKEVVY 244


>gi|307265640|ref|ZP_07547193.1| CMP/dCMP deaminase zinc-binding [Thermoanaerobacter wiegelii
           Rt8.B1]
 gi|306919284|gb|EFN49505.1| CMP/dCMP deaminase zinc-binding [Thermoanaerobacter wiegelii
           Rt8.B1]
          Length = 147

 Score = 62.2 bits (151), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 25/98 (25%), Positives = 36/98 (36%), Gaps = 25/98 (25%)

Query: 26  VGAVAVLNNKIISRAGN--------------RNRELKDVTA---------HAEILAIRMG 62
           VGA+ V++  IIS   N                 +L   +          HAE  AI   
Sbjct: 27  VGAILVVDKHIISTGYNGPPTGLAHCEDTGCLREQLGIPSGERPELCRGVHAEQNAIIQA 86

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
              L         LYV+  PC +CA  +  A ++R+ Y
Sbjct: 87  A--LHGVSTKGATLYVSASPCVICAKMLINAGVKRIVY 122


>gi|163753563|ref|ZP_02160686.1| deoxycytidylate deaminase [Kordia algicida OT-1]
 gi|161325777|gb|EDP97103.1| deoxycytidylate deaminase [Kordia algicida OT-1]
          Length = 144

 Score = 62.2 bits (151), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 27/116 (23%), Positives = 41/116 (35%), Gaps = 25/116 (21%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTA--------- 52
           K  + ++  A E  + +  + +  VGA+ V +  IIS   N        +          
Sbjct: 8   KYDHAYLRMAKEWGKLSYCKRKQ-VGAIIVKDRMIISDGYNGT-----PSGFENFCEDEE 61

Query: 53  --------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
                   HAE  AI                LY+T+ PC  C+  I  A I R+ Y
Sbjct: 62  GYTKWYVLHAEANAILKVAASTQS--CVGATLYITMSPCKECSKLIHQAGITRVVY 115


>gi|169350182|ref|ZP_02867120.1| hypothetical protein CLOSPI_00926 [Clostridium spiroforme DSM 1552]
 gi|169292965|gb|EDS75098.1| hypothetical protein CLOSPI_00926 [Clostridium spiroforme DSM 1552]
          Length = 154

 Score = 62.2 bits (151), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 34/135 (25%), Positives = 48/135 (35%), Gaps = 34/135 (25%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLN-NKIISRAGN-------------- 42
           +     FM  A   A  +      P   VGA  V   NKI+    N              
Sbjct: 5   INWTQYFMGVAKLSAFRSKD----PNTQVGACIVSPENKIVGVGYNGLPWGCDDKEFPWE 60

Query: 43  -RNRELKDV----TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRR 97
            R  +L D       HAE+ AI     + S   L    +YV+L PC  C  AI  + I  
Sbjct: 61  VREGDLYDTKYPYVVHAELNAI-----LNSIGNLKGCRIYVSLFPCHECVKAIIQSGISE 115

Query: 98  LYYGASNPKGGGIEN 112
           + +   + K  G ++
Sbjct: 116 IVF--EDDKYSGTDS 128


>gi|32453705|ref|NP_861914.1| deoxycytidylate deaminase [Enterobacteria phage RB69]
 gi|32350524|gb|AAP76123.1| Cd dCMP deaminase [Enterobacteria phage RB69]
          Length = 169

 Score = 62.2 bits (151), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 2/49 (4%)

Query: 53  HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
           HAE+ AI    R  +   +    LY TL PC  C  AI+ + I+++ Y 
Sbjct: 104 HAELNAILFAARKGNS--IEGATLYTTLSPCPDCTKAITQSGIKKVVYA 150


>gi|299779161|ref|YP_003734355.1| Cd dCMP deaminase [Enterobacteria phage IME08]
 gi|298105890|gb|ADI55534.1| Cd dCMP deaminase [Enterobacteria phage IME08]
          Length = 181

 Score = 62.2 bits (151), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 30/117 (25%), Positives = 39/117 (33%), Gaps = 43/117 (36%)

Query: 26  VGAVAVLNNKIISRAGNR-----------------NRELKDVTA---------------- 52
           VGAV   N +IIS   N                   R + D                   
Sbjct: 24  VGAVIEKNGRIISTGYNGSPSGGVNCCDHAVEQDWTRVVYDPARMSHKSVLLKEHRMAHA 83

Query: 53  --------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
                   HAE+ AI    R  S   +    +YVTL PC  CA +I+ + I+ L Y 
Sbjct: 84  AWSSKNEIHAELNAILFAARTGSS--IDGATMYVTLSPCADCAKSIAQSGIKTLVYA 138


>gi|149247534|ref|XP_001528176.1| hypothetical protein LELG_00696 [Lodderomyces elongisporus NRRL
           YB-4239]
 gi|146448130|gb|EDK42518.1| hypothetical protein LELG_00696 [Lodderomyces elongisporus NRRL
           YB-4239]
          Length = 360

 Score = 62.2 bits (151), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 26/123 (21%), Positives = 43/123 (34%), Gaps = 25/123 (20%)

Query: 43  RNRELKD----VTAHAEILAIRMGC------RILSQEILPE------------VD---LY 77
           +   + D     T H+ + AI          R   +E                     +Y
Sbjct: 226 QTIAINDGDLRPTKHSVMQAIDQIAKEELGKREKDEEDFNGDEKRIERERGYLCTNMIVY 285

Query: 78  VTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRS 137
            T EPC MC+ A+  +RI R  Y      GGG+E+          +    I+  + EQ  
Sbjct: 286 TTHEPCVMCSMALVHSRIVRCTYLKPVANGGGMESSYYLGDRDGLNWKFNIWRWLGEQEL 345

Query: 138 RQI 140
           +++
Sbjct: 346 QKL 348


>gi|47459365|ref|YP_016227.1| deoxycytidylate deaminase competance related protein [Mycoplasma
           mobile 163K]
 gi|47458695|gb|AAT28016.1| deoxycytidylate deaminase competance related protein [Mycoplasma
           mobile 163K]
          Length = 154

 Score = 61.9 bits (150), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 34/119 (28%), Positives = 53/119 (44%), Gaps = 30/119 (25%)

Query: 4   GNVFMSCALEEAQNAALRNEIP---VGAVAVLNNK-IISRAGNR--NRELKDVTA----- 52
            + FM      ++ +ALR++ P   VGA  V +NK ++S   N     + K+ +      
Sbjct: 9   HSYFM----ALSKVSALRSKDPNTKVGACIVDDNKRVVSLGYNGMPRGDDKNFSWKRDNE 64

Query: 53  -----------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
                      HAEI AI    + +  +      LYV+L PC+ CA  I+   I +LYY
Sbjct: 65  KAADNKYAYVIHAEINAILNANKQIDSK----CVLYVSLFPCSNCAKIIAQVGINQLYY 119


>gi|260223396|emb|CBA33920.1| Probable deoxycytidylate deaminase [Curvibacter putative symbiont
           of Hydra magnipapillata]
          Length = 185

 Score = 61.9 bits (150), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 30/121 (24%), Positives = 40/121 (33%), Gaps = 32/121 (26%)

Query: 4   GNVFMSCALEEA---QNAALRNEIPVGAVAV-LNNKIISRAGNRN--------------- 44
            ++FM  AL  A   ++A  RN    GA  V  +NKI     N                 
Sbjct: 20  HSMFMGVALLAAARSKDARKRN----GACIVGPDNKISGVGYNGLPRGCDDHDEHYWQDD 75

Query: 45  -----RELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLY 99
                        HAE  AI       +   L    +Y T  PC  C  +I    I+R+ 
Sbjct: 76  DSDPLNSRHSYIVHAEQNAILN----CTSLPLHGSTIYATQYPCPRCVQSIIQVGIKRVV 131

Query: 100 Y 100
           Y
Sbjct: 132 Y 132


>gi|260830687|ref|XP_002610292.1| hypothetical protein BRAFLDRAFT_126857 [Branchiostoma floridae]
 gi|229295656|gb|EEN66302.1| hypothetical protein BRAFLDRAFT_126857 [Branchiostoma floridae]
          Length = 267

 Score = 61.9 bits (150), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 16/58 (27%), Positives = 27/58 (46%), Gaps = 3/58 (5%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLN--NKIISRAGNRNRELKDVTAHAEILAIR 60
             +M  AL+ AQ+A      PVGAV V    +++I    +      +   HA ++A+ 
Sbjct: 191 QKYMQRALQAAQHAKQTGMEPVGAVVVDPVADEVIGVGHDLRHA-GNPLHHAVMVAVD 247


>gi|301064678|ref|ZP_07205067.1| cytidine and deoxycytidylate deaminase zinc-binding region [delta
           proteobacterium NaphS2]
 gi|300441220|gb|EFK05596.1| cytidine and deoxycytidylate deaminase zinc-binding region [delta
           proteobacterium NaphS2]
          Length = 150

 Score = 61.9 bits (150), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 26/111 (23%), Positives = 39/111 (35%), Gaps = 29/111 (26%)

Query: 26  VGAVAVLNNKIISRAGN------------------------RNRELKDVTAHAEILAIRM 61
           VGA+ V   +I++   N                           EL     HAE  AI  
Sbjct: 30  VGAILVKEKRILATGYNGAPAGLKHCVEVGCLRENGSIPSGTRHELCRAL-HAEQNAIVQ 88

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY--GASNPKGGGI 110
             R      +    LY T +PC +C+  +  A I+R+Y+  G  +     I
Sbjct: 89  AARYGIS--IAGSTLYCTNKPCIICSKMLINAGIKRIYFDQGYDDELADAI 137


>gi|269986813|gb|EEZ93091.1| CMP/dCMP deaminase zinc-binding protein [Candidatus Parvarchaeum
           acidiphilum ARMAN-4]
          Length = 159

 Score = 61.9 bits (150), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 21/97 (21%), Positives = 32/97 (32%), Gaps = 27/97 (27%)

Query: 28  AVAVLNNKIISRAG----------------------NRN--RELKDV-TAHAEILAIRMG 62
            V V  N+I++                         N         + T HAE  AI   
Sbjct: 30  CVIVKENRILATGYAGSPKGMPHCDDVGHMLRKQYDNETGEITTHCIRTVHAEQNAITQA 89

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLY 99
            +      L     YVT+EPC +CA  +    ++R+ 
Sbjct: 90  AKFGVS--LDGSTAYVTMEPCFVCAKMLVQVGVKRVV 124


>gi|319941045|ref|ZP_08015381.1| deoxycytidylate deaminase [Sutterella wadsworthensis 3_1_45B]
 gi|319805402|gb|EFW02204.1| deoxycytidylate deaminase [Sutterella wadsworthensis 3_1_45B]
          Length = 138

 Score = 61.9 bits (150), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 29/114 (25%), Positives = 45/114 (39%), Gaps = 18/114 (15%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKD-----------V 50
           K   ++M  A   A+ +  +  + VG V V N+ IIS   N      D           V
Sbjct: 5   KDNLMYMRIAQIAAERSYAKR-LKVGCVIVKNHSIISFGWNGMPTGYDNCCEMEVDGKLV 63

Query: 51  TA----HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
           T     HAE+ AI       +     +  +++T  PC  CA  I    I +++Y
Sbjct: 64  TRPEVQHAELNAI--AKLAENGYSSKDAAIFITHSPCIDCALLIQKCGISQVFY 115


>gi|255534332|ref|YP_003094703.1| Deoxycytidylate deaminase [Flavobacteriaceae bacterium 3519-10]
 gi|255340528|gb|ACU06641.1| Deoxycytidylate deaminase [Flavobacteriaceae bacterium 3519-10]
          Length = 141

 Score = 61.9 bits (150), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 28/109 (25%), Positives = 44/109 (40%), Gaps = 15/109 (13%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRN--------RELKDVTA--- 52
              ++  A+E A+ +       VGA+ V +  IIS   N           + +  T    
Sbjct: 7   DFAYLKMAMEWAKLSHCERRK-VGALIVKDRMIISDGYNGTPSGFENCCEDSEGKTHWYV 65

Query: 53  -HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
            HAE  AI       S +   +  LY+TL PC  C+     A I+++ Y
Sbjct: 66  LHAEANAILKLA--GSTQSAKDATLYLTLSPCRDCSKLAVQAGIKKVVY 112


>gi|33620697|ref|NP_891789.1| dCMP deaminase [Enterobacteria phage RB49]
 gi|33438567|gb|AAL15123.2| dCMP deaminase [Enterobacteria phage RB49]
          Length = 168

 Score = 61.9 bits (150), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 31/141 (21%), Positives = 48/141 (34%), Gaps = 43/141 (30%)

Query: 5   NVFMSCALEEAQNA----ALRNEIPVGAVAVLNNKIISRAGN-----RNRELKDV----- 50
             +M  A   A+N+           VGA+   + +IIS   N     +            
Sbjct: 4   QTYMQIAYLIAKNSKCVSWK-----VGALIEKDGRIISTGFNGTPAGQVNCSCHAHKSGW 58

Query: 51  ---------------TA-------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAA 88
                          +A       HAE+ AI    R      +    ++ T  PC  CA 
Sbjct: 59  LDDDGKMIPEKRPEHSAWSQKNEIHAELNAILFAARNGVS--IEGASMWCTASPCPDCAK 116

Query: 89  AISLARIRRLYYGASNPKGGG 109
           AI+ + I+ LYY  +  + GG
Sbjct: 117 AIANSGIKHLYYCDTYDRNGG 137


>gi|254459001|ref|ZP_05072424.1| riboflavin biosynthesis protein RibD [Campylobacterales bacterium
           GD 1]
 gi|207084272|gb|EDZ61561.1| riboflavin biosynthesis protein RibD [Campylobacterales bacterium
           GD 1]
          Length = 336

 Score = 61.9 bits (150), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 37/172 (21%), Positives = 66/172 (38%), Gaps = 42/172 (24%)

Query: 5   NVFMSCALEEAQN--AALRNEIPVGAVAVLN-NKIIS-RAGNRNRELKDVTAHAEILAIR 60
           + F++ AL+EA            VG   V   N+++S  A       K    HAE++A+R
Sbjct: 6   SFFINLALKEAWKYQGLTYPNPAVGCTIVSPKNELLSVEAH-----KKSGLPHAEVMALR 60

Query: 61  MGCRILSQEI----------------------LPEVDLYVTLEPC------TMCAAAISL 92
                L+ +                         ++ LY TLEPC        CA+ IS 
Sbjct: 61  TAYFKLTNDSKILELTSSSEIHTFLLNNHNNCFRDISLYTTLEPCSHIGKTPSCASLISA 120

Query: 93  ARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
             I++++ G ++        GT+    +      ++   I E+++  +I  F
Sbjct: 121 LGIKKVFVGFNDINEEASG-GTEILKKSG----VDVQSSILEKKAYDLIAPF 167


>gi|170037228|ref|XP_001846461.1| cytidine and deoxycytidylate deaminase zinc-binding region [Culex
           quinquefasciatus]
 gi|167880295|gb|EDS43678.1| cytidine and deoxycytidylate deaminase zinc-binding region [Culex
           quinquefasciatus]
          Length = 377

 Score = 61.9 bits (150), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 17/64 (26%), Positives = 33/64 (51%), Gaps = 1/64 (1%)

Query: 64  RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123
                 +    D+Y+T EPC MCA A++ +R+RR+++       G + + T+ + +   +
Sbjct: 310 AKYGPYLCTGYDVYLTHEPCIMCAMALTHSRVRRVFF-HRKTSRGALGSITKVHCVTGLN 368

Query: 124 HSPE 127
           H  E
Sbjct: 369 HHYE 372


>gi|225456327|ref|XP_002283817.1| PREDICTED: hypothetical protein [Vitis vinifera]
 gi|297734422|emb|CBI15669.3| unnamed protein product [Vitis vinifera]
          Length = 229

 Score = 61.9 bits (150), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 28/128 (21%), Positives = 42/128 (32%), Gaps = 39/128 (30%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKII-SRAGN-------------- 42
           +   + FM+ A   A+ +      P   VGA  V  N +I     N              
Sbjct: 69  LSWDDYFMAIAFLSAERSKD----PNRQVGACLVSQNGVILGIGYNGFPRGCSDDKLPWA 124

Query: 43  RNRELKDVT-------AHAEILAI---RMGCRILSQEILPEVDLYVTLEPCTMCAAAISL 92
           +  +  D          HAE+ AI           +       LYVT+ PC  CA  I  
Sbjct: 125 KKSKTGDPLETKYPYVCHAEVNAILNTNHASAAGQR-------LYVTMFPCNECAKIIIQ 177

Query: 93  ARIRRLYY 100
           + +  + Y
Sbjct: 178 SGVSEVIY 185


>gi|302335967|ref|YP_003801174.1| dCMP deaminase [Olsenella uli DSM 7084]
 gi|301319807|gb|ADK68294.1| dCMP deaminase [Olsenella uli DSM 7084]
          Length = 160

 Score = 61.9 bits (150), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 30/145 (20%), Positives = 45/145 (31%), Gaps = 31/145 (21%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVL-NNKIISRAGNRN-----------R 45
           +     FM  A+  +  +      P   VGA     N++I+S   N              
Sbjct: 9   ISWDEFFMRVAIAASLRSKD----PKTQVGACIADTNDRILSVGYNGTPSGLDDDEFPWG 64

Query: 46  ELKDVT-------AHAEILAIRMGCRILSQ-EILPEVDLYVTLEPCTMCAAAISLARIRR 97
             +D          HAE  AI          + +    +YVTL PC  CA  +  A +  
Sbjct: 65  TSEDPLFDKHNYVIHAEANAI---LNYRGSLKDMQGAKVYVTLFPCQECAKTLVQAGVGE 121

Query: 98  LYYGASNPKGGGIENGTQFYTLATC 122
           + Y   +   G   N         C
Sbjct: 122 VIY-LDDKYDGTEGNRVSKSVFDRC 145


>gi|322510984|gb|ADX06297.1| deoxycytidylate deaminase domain-containing protein [Organic Lake
           phycodnavirus 2]
          Length = 142

 Score = 61.9 bits (150), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 23/86 (26%), Positives = 33/86 (38%), Gaps = 13/86 (15%)

Query: 26  VGAVAVLNNKIISRAGN---------RNRELKD--VTAHAEILAIRMGCRILSQEILPEV 74
           VG + V +N+IIS+  N                   T HAE  A+    +          
Sbjct: 31  VGCLIVRDNRIISQGYNGFLPGLPHTSVVVDNHEIATIHAEQNALTDCAKRGVSCDKS-- 88

Query: 75  DLYVTLEPCTMCAAAISLARIRRLYY 100
             Y+T  PC  CA  +  A I+ +YY
Sbjct: 89  VAYITHYPCLNCAKLLYSAGIKDIYY 114


>gi|154148617|ref|YP_001405744.1| riboflavin biosynthesis protein RibD [Campylobacter hominis ATCC
           BAA-381]
 gi|153804626|gb|ABS51633.1| riboflavin biosynthesis protein RibD [Campylobacter hominis ATCC
           BAA-381]
          Length = 362

 Score = 61.9 bits (150), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 37/194 (19%), Positives = 57/194 (29%), Gaps = 62/194 (31%)

Query: 3   KGNVFMSCALEEAQNAALRN--EIPVGAVAVLN-NKIIS-RAGNRNRELKDVTAHAEILA 58
           +   +M+ AL++A    L       VGAV + N  KI+S  A       K   AHAE+LA
Sbjct: 2   QDEFYMNLALQKAWKNQLLTYPNPAVGAVVLDNAGKILSIEAH-----EKAGFAHAEVLA 56

Query: 59  IRMGCR------------------------------------------ILSQEILPEVDL 76
           +                                                   + L    +
Sbjct: 57  VFRALENSDRNFTLKFLNSYNKNFNSNFKDTKNLATEFNANFIYDFIIKNHADKLKGGKI 116

Query: 77  YVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYP 130
           +VTLEPC        CA  IS  + +    GA +                       +  
Sbjct: 117 FVTLEPCSHLGKTPPCANLISALKFKDCVIGAKDENKIASGGAYILNKN-----GVNVKL 171

Query: 131 GISEQRSRQIIQDF 144
           G+ +  +  +I  F
Sbjct: 172 GVCKNEAEILISPF 185


>gi|237651567|ref|YP_002899037.1| putative deoxycytidylate deaminase [Roseophage DSS3P2]
 gi|220898037|gb|ACL81295.1| putative deoxycytidylate deaminase [Silicibacter phage DSS3phi2]
          Length = 142

 Score = 61.9 bits (150), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 31/113 (27%), Positives = 44/113 (38%), Gaps = 23/113 (20%)

Query: 11  ALEEAQNAALRNEIP---VGAVAVLNNKIISR-AGN---RNRELK-----------DVTA 52
           AL  A+  + R+  P   VGAV +  +K I+    N   R  E K               
Sbjct: 9   ALGLAEAVSKRSRDPSTKVGAVIIRPDKTIASMGYNGFPRTMEDKEEWWSDRPQKYSRVI 68

Query: 53  HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNP 105
           H E+ A+        +E +  + LY T   C  CA  I  A I R+ +G S  
Sbjct: 69  HGEMNALLNA-----KEPVLGMTLYCTHPCCEHCAKHIIAAGITRVVFGTSEE 116


>gi|330719293|ref|ZP_08313893.1| ComE operon protein 2 [Leuconostoc fallax KCTC 3537]
          Length = 153

 Score = 61.9 bits (150), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 23/90 (25%), Positives = 39/90 (43%), Gaps = 17/90 (18%)

Query: 26  VGAVAVLNNKIISRAGNRNR-------ELKDVT--------AHAEILAIRMGCRILSQEI 70
           VGA+ V N++II+   N +        E+ D+          HAE  A+    ++     
Sbjct: 31  VGAIIVKNHRIIASGYNGSIAGTPHCTEVGDLIVDGHCVRAVHAEQNALMQAAQMGIS-- 88

Query: 71  LPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
           +   +LYVT  PC  C   +  A I+ + +
Sbjct: 89  VDGAELYVTDMPCLQCTKLLLQAGIQTIKF 118


>gi|225019182|ref|ZP_03708374.1| hypothetical protein CLOSTMETH_03134 [Clostridium methylpentosum
           DSM 5476]
 gi|224948034|gb|EEG29243.1| hypothetical protein CLOSTMETH_03134 [Clostridium methylpentosum
           DSM 5476]
          Length = 155

 Score = 61.9 bits (150), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 28/124 (22%), Positives = 44/124 (35%), Gaps = 27/124 (21%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNR------------EL 47
           M     +M+ A + A+  +      VGAV V  + +++ R+ N                 
Sbjct: 7   MNMDQEYMAQAYQYAEEHSRCLRRKVGAVLVSCDGEVL-RSTNLPVPDPQQCIQEDCLRD 65

Query: 48  KDVTA-----------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIR 96
            +  A           HAEI  +    R           +Y TL PC  CA A+  + I 
Sbjct: 66  LNGIASGQHSDLCRCIHAEIDLLIQCARKGISSD--RATVYCTLSPCPNCARALLRSGIA 123

Query: 97  RLYY 100
           RL +
Sbjct: 124 RLVF 127


>gi|163786644|ref|ZP_02181092.1| deoxycytidylate deaminase [Flavobacteriales bacterium ALC-1]
 gi|159878504|gb|EDP72560.1| deoxycytidylate deaminase [Flavobacteriales bacterium ALC-1]
          Length = 143

 Score = 61.9 bits (150), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 33/138 (23%), Positives = 46/138 (33%), Gaps = 33/138 (23%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTA----------- 52
              ++  A E  + +  + +  VGA+ V +  IIS   N        T            
Sbjct: 10  DKAYLRIAKEWGKLSHCKRKQ-VGALIVKDRMIISDGYNGT-----PTGFENYCEDDEGY 63

Query: 53  ------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY--GASN 104
                 HAE  AI                LY+TL PC  C+  I  A I R+ Y  G  +
Sbjct: 64  TKWYVLHAEANAILKVASSTQS--CKGATLYITLSPCKECSKLIHQAGIIRVVYQNGYKD 121

Query: 105 PKGGGIENGTQFYTLATC 122
                  +G QF   A  
Sbjct: 122 D------SGLQFLAKAGI 133


>gi|9631768|ref|NP_048547.1| hypothetical protein PBCV1_A200R [Paramecium bursaria Chlorella
           virus 1]
 gi|1181363|gb|AAC96568.1| contains cytidine and deoxycytidine deaminase Zn-binding region
           signature [Paramecium bursaria Chlorella virus 1]
          Length = 118

 Score = 61.9 bits (150), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 25/109 (22%), Positives = 41/109 (37%), Gaps = 32/109 (29%)

Query: 11  ALEEAQNAALRNEIPV--GAVAVLNNKIISRAGNRNREL-KDVTAHAEILAIRMGCRILS 67
           A+E+A+ +      P   G V +   KIIS   N  R+     + HAE+ A+        
Sbjct: 11  AIEQAKRST----GPFKHGCVVLSGKKIISEGHNHTRKQIGTFSVHAEMDAL-------- 58

Query: 68  QEILPEVDLY----------------VTLEPCTMCAAAISLARIRRLYY 100
              + + DLY                    PC +C AA+    ++ + Y
Sbjct: 59  -WKIYDSDLYEHKKAVIVRVNDSGKLANSRPCVICMAALQQHGVKTIVY 106


>gi|291561900|emb|CBL40703.1| Deoxycytidylate deaminase [butyrate-producing bacterium SS3/4]
          Length = 162

 Score = 61.9 bits (150), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 35/123 (28%), Positives = 49/123 (39%), Gaps = 31/123 (25%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVL-NNKIISRAGNRN------------ 44
           +     FM  A    + +A+R++ P   VGA  V  +NKI+S   N              
Sbjct: 9   ITWDEYFMGVA----KLSAMRSKDPNTQVGACIVSEDNKILSMGYNGFPKGCSDDEFPWD 64

Query: 45  RELKDV-------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRR 97
           +  +D          H+E+ AI           L    LYVTL PC  CA AI  A I+ 
Sbjct: 65  KMDEDPYNRKYFYVTHSELNAILN----YRGGSLEGSKLYVTLFPCNECAKAIIQAGIQT 120

Query: 98  LYY 100
           + Y
Sbjct: 121 IVY 123


>gi|68536087|ref|YP_250792.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Corynebacterium jeikeium K411]
 gi|68263686|emb|CAI37174.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Corynebacterium jeikeium K411]
          Length = 354

 Score = 61.9 bits (150), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 27/109 (24%), Positives = 38/109 (34%), Gaps = 16/109 (14%)

Query: 25  PVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83
           PVGAV      +++ R            AHAE++A+                  VTLEPC
Sbjct: 25  PVGAVIEDPSGQVVGRGF----TQAPGGAHAEVVALEQAGEKARGGR-----AIVTLEPC 75

Query: 84  TM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
                   CA A+  A IRR+ +  ++P                  H P
Sbjct: 76  NHTGRTGPCAEALIRAGIRRVDFLFADPNPIAEGGAATLRAAGVEVHGP 124


>gi|303327264|ref|ZP_07357706.1| cytidine/deoxycytidylate deaminase family protein [Desulfovibrio
           sp. 3_1_syn3]
 gi|302863252|gb|EFL86184.1| cytidine/deoxycytidylate deaminase family protein [Desulfovibrio
           sp. 3_1_syn3]
          Length = 216

 Score = 61.9 bits (150), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 25/104 (24%), Positives = 38/104 (36%), Gaps = 25/104 (24%)

Query: 26  VGAVAVLNNKIISRAGN--------------RNRELKDVTA---------HAEILAIRMG 62
           VGAVAV + +I++   N                 +L   +          HAE   I   
Sbjct: 77  VGAVAVKDKRILATGYNGAPAGVPHCLEVGCLREQLGIPSGQRHEICRGLHAEQNVIIQA 136

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPK 106
              +    +   +LY T  PC +C+  +    IRR+YY    P 
Sbjct: 137 A--VHGINIQGAELYCTTHPCVLCSKMLINCGIRRIYYAEDYPD 178


>gi|58579260|ref|YP_197472.1| hypothetical protein ERWE_CDS_05960 [Ehrlichia ruminantium str.
           Welgevonden]
 gi|58417886|emb|CAI27090.1| Hypothetical protein ERWE_CDS_05960 [Ehrlichia ruminantium str.
           Welgevonden]
          Length = 62

 Score = 61.9 bits (150), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 28/59 (47%), Positives = 39/59 (66%), Gaps = 2/59 (3%)

Query: 85  MCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQD 143
           MCA AIS ARI RLY+G  N K GG+ENG + +    CH  PE+Y GI ++ + ++I +
Sbjct: 1   MCAQAISFARIHRLYFGVYNKKYGGVENGARVF--HFCHSIPEVYGGILKEENMKLITN 57


>gi|170017672|ref|YP_001728591.1| deoxycytidylate deaminase [Leuconostoc citreum KM20]
 gi|169804529|gb|ACA83147.1| Deoxycytidylate deaminase [Leuconostoc citreum KM20]
          Length = 161

 Score = 61.9 bits (150), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 21/90 (23%), Positives = 35/90 (38%), Gaps = 17/90 (18%)

Query: 26  VGAVAVLNNKIISRAGNRNRE-------------LKDVTA--HAEILAIRMGCRILSQEI 70
           VGA+ V NN+II+   N +                       HAE  A+    ++     
Sbjct: 31  VGAIIVQNNRIIASGYNGSVSGTPHCTEVGDLMVDGHCVRAVHAEQNALMQAAQMGIS-- 88

Query: 71  LPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
           +   + YVT  PC  C   +  A I+++ +
Sbjct: 89  VSGAEFYVTDVPCIQCTKLLLQAGIKKINF 118


>gi|157311519|ref|YP_001469562.1| deoxycytidylate deaminase [Enterobacteria phage Phi1]
 gi|149380723|gb|ABR24728.1| Cd dCMP deaminase [Enterobacteria phage Phi1]
          Length = 168

 Score = 61.9 bits (150), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 31/141 (21%), Positives = 48/141 (34%), Gaps = 43/141 (30%)

Query: 5   NVFMSCALEEAQNA----ALRNEIPVGAVAVLNNKIISRAGN-----RNRELKDV----- 50
             +M  A   A+N+           VGA+   + +IIS   N     +            
Sbjct: 4   QTYMQIAYLIAKNSKCVSWK-----VGALIEKDGRIISTGFNGTPAGQVNCSCHAHKSGW 58

Query: 51  ---------------TA-------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAA 88
                          +A       HAE+ AI    R      +    ++ T  PC  CA 
Sbjct: 59  LDDEGKMIPEKRPEHSAWSQKNEIHAELNAILFAARSGVS--IEGASMWCTASPCPDCAK 116

Query: 89  AISLARIRRLYYGASNPKGGG 109
           AI+ + I+ LYY  +  + GG
Sbjct: 117 AIANSGIKHLYYCDTYDRNGG 137


>gi|57234807|ref|YP_181158.1| cytidine/deoxycytidylate deaminase family protein [Dehalococcoides
           ethenogenes 195]
 gi|270307783|ref|YP_003329841.1| cytidine/deoxycytidylate deaminase, Zn-binding protein
           [Dehalococcoides sp. VS]
 gi|57225255|gb|AAW40312.1| cytidine/deoxycytidylate deaminase family protein [Dehalococcoides
           ethenogenes 195]
 gi|270153675|gb|ACZ61513.1| cytidine/deoxycytidylate deaminase, Zn-binding protein
           [Dehalococcoides sp. VS]
          Length = 157

 Score = 61.5 bits (149), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 30/124 (24%), Positives = 43/124 (34%), Gaps = 27/124 (21%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGN--------------RNREL 47
                F+  A   A+ +       VGAVAV +  I+S   N                 + 
Sbjct: 5   NADEYFLKIAAVVAERSTCVRHH-VGAVAVKDKHILSTGYNGAPAGLTDCLELGCLRNQN 63

Query: 48  KDVTA---------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRR- 97
              +          HAE   I      L    L    +Y T  PC +CA  ++ ARI+R 
Sbjct: 64  GIPSGTRHEICRAVHAEQNVIIQAA--LHGTSLEGATVYATHTPCVLCAKMLTNARIKRY 121

Query: 98  LYYG 101
           + YG
Sbjct: 122 VSYG 125


>gi|330991420|ref|ZP_08315371.1| Riboflavin biosynthesis protein ribD [Gluconacetobacter sp. SXCC-1]
 gi|329761439|gb|EGG77932.1| Riboflavin biosynthesis protein ribD [Gluconacetobacter sp. SXCC-1]
          Length = 339

 Score = 61.5 bits (149), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 29/119 (24%), Positives = 44/119 (36%), Gaps = 15/119 (12%)

Query: 9   SCALEEAQN--AALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
             A++EA           PVG   +  +  I++  G+        T HAEI AI   CR 
Sbjct: 15  RAAVDEAARHVGVTAPNPPVGCALLDRDGTILAVGGHHRA----GTPHAEIQAINQ-CRA 69

Query: 66  LSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
                       VTLEPC        C+ A++   +R ++ G  +P       G  +  
Sbjct: 70  RGLLD-RAHTAVVTLEPCNHTGRTGPCSHALAATPVRDVWIGLRDPNPHVAGGGAGYLR 127


>gi|325118493|emb|CBZ54045.1| hypothetical protein NCLIV_038260 [Neospora caninum Liverpool]
          Length = 487

 Score = 61.5 bits (149), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 27/139 (19%), Positives = 44/139 (31%), Gaps = 34/139 (24%)

Query: 4   GNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGNRNREL------------KD 49
              FM      +  +    R    VGA+    N++I+   N                  D
Sbjct: 331 DTYFMRLTFLASTRSNCMKRR---VGAIVARGNRVIATGYNGTPSQAANCNAGGCARCND 387

Query: 50  V------------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRR 97
                          HAE  A+    R    +      LYVT  PC  CA  +  + I+ 
Sbjct: 388 PNVSQGRALEACECIHAEANALLEAGR----DRAMNGTLYVTCLPCLGCAKLVVQSAIQT 443

Query: 98  LYYG-ASNPKGGGIENGTQ 115
           + Y    + + G ++  T+
Sbjct: 444 VVYAEEYDNRSGALDLLTR 462


>gi|50549399|ref|XP_502170.1| YALI0C23210p [Yarrowia lipolytica]
 gi|49648037|emb|CAG82490.1| YALI0C23210p [Yarrowia lipolytica]
          Length = 310

 Score = 61.5 bits (149), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 27/122 (22%), Positives = 39/122 (31%), Gaps = 32/122 (26%)

Query: 4   GNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGN-------RNRELKDV---- 50
              FM  A   A+ +    R    VG V V ++++I    N          E        
Sbjct: 163 DAYFMRLADLAAERSNCMKRQ---VGCVIVRDSRVICTGYNGTPRGAVNCNEGGCARCNS 219

Query: 51  -----------TAHAEILAIRMGCRILSQEILPEVD-LYVTLEPCTMCAAAISLARIRRL 98
                        HAE  A+    R    E + +   LY    PC  C+  I  A I+ +
Sbjct: 220 GEAGAALSTCLCLHAEENALLEAGR----ERIRDTSKLYCNTCPCLTCSIKIVQAGIKEV 275

Query: 99  YY 100
            Y
Sbjct: 276 IY 277


>gi|269216184|ref|ZP_06160038.1| cytidine/deoxycytidylate deaminase family protein [Slackia exigua
           ATCC 700122]
 gi|269130443|gb|EEZ61521.1| cytidine/deoxycytidylate deaminase family protein [Slackia exigua
           ATCC 700122]
          Length = 139

 Score = 61.5 bits (149), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 27/122 (22%), Positives = 41/122 (33%), Gaps = 26/122 (21%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGN--------------RNRELKDVTA- 52
           M  A E +  A       VGA+ V + +I++   N                  L   +  
Sbjct: 1   MHLAFEVSGRATCLR-RAVGALLVKDRRILATGYNGVPTGLRHCEEVGCLRERLGVPSGQ 59

Query: 53  --------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASN 104
                   HAE  AI    R      +    +Y+T +PC++C   I  A I  + Y    
Sbjct: 60  RHEICRGLHAEQNAIIQAARHGIN--IQGSSIYITTQPCSVCTKMIINAGIGEIVYAEGY 117

Query: 105 PK 106
           P 
Sbjct: 118 PD 119


>gi|238695103|ref|YP_002922297.1| dCMP deaminase [Enterobacteria phage JSE]
 gi|220029239|gb|ACL78174.1| dCMP deaminase [Enterobacteria phage JSE]
          Length = 168

 Score = 61.5 bits (149), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 31/141 (21%), Positives = 48/141 (34%), Gaps = 43/141 (30%)

Query: 5   NVFMSCALEEAQNA----ALRNEIPVGAVAVLNNKIISRAGN-----RNRELKDV----- 50
             +M  A   A+N+           VGA+   + +IIS   N     +            
Sbjct: 4   QTYMQIAYLIAKNSKCVSWK-----VGALIEKDGRIISTGFNGTPAGQVNCSCHAHKNGW 58

Query: 51  ---------------TA-------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAA 88
                          +A       HAE+ AI    R      +    ++ T  PC  CA 
Sbjct: 59  LDDDGKMIPEKRPEHSAWSQKNEIHAELNAILFAARSGVS--IEGASMWCTASPCPDCAK 116

Query: 89  AISLARIRRLYYGASNPKGGG 109
           AI+ + I+ LYY  +  + GG
Sbjct: 117 AIANSGIKHLYYCDTYDRNGG 137


>gi|134057563|emb|CAK48917.1| unnamed protein product [Aspergillus niger]
          Length = 338

 Score = 61.5 bits (149), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 28/122 (22%), Positives = 36/122 (29%), Gaps = 31/122 (25%)

Query: 4   GNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGN-------RNRELKDV---- 50
              FM  A   AQ +    R    VG V V + ++IS   N          E        
Sbjct: 194 DQYFMELASLAAQRSNCMKRR---VGCVLVRDRRVISTGYNGTPRHIRNCNEGGCPRCNR 250

Query: 51  ------------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98
                         HAE  A+    R   +E      LY    PC  C   I+   I  +
Sbjct: 251 GEGGGVGLSTCLCLHAEENALLEAGRERIRE---GAILYCDTCPCLTCTVKITQVGITEV 307

Query: 99  YY 100
            Y
Sbjct: 308 VY 309


>gi|115398407|ref|XP_001214795.1| deoxycytidylate deaminase [Aspergillus terreus NIH2624]
 gi|114192986|gb|EAU34686.1| deoxycytidylate deaminase [Aspergillus terreus NIH2624]
          Length = 259

 Score = 61.5 bits (149), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 29/122 (23%), Positives = 39/122 (31%), Gaps = 31/122 (25%)

Query: 4   GNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGNRN-RELKDV---------- 50
              FM  A   A  +    R    VG V V ++++IS   N   R LK+           
Sbjct: 83  DQYFMQLASLAALRSNCMKRR---VGCVLVRDHRVISTGYNGTPRHLKNCNEGGCPRCNR 139

Query: 51  ------------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98
                         HAE  A+    R   +E      LY    PC  C   I+   I  +
Sbjct: 140 GEGGGVGLSTCLCLHAEENALLEAGRERIRE---GAILYCDTCPCLTCTVKIAQVGISEV 196

Query: 99  YY 100
            Y
Sbjct: 197 VY 198


>gi|77917925|ref|YP_355740.1| putative cytosine/adenosine deaminase [Pelobacter carbinolicus DSM
           2380]
 gi|77544008|gb|ABA87570.1| putative cytosine/adenosine deaminase [Pelobacter carbinolicus DSM
           2380]
          Length = 221

 Score = 61.5 bits (149), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 26/141 (18%), Positives = 44/141 (31%), Gaps = 20/141 (14%)

Query: 13  EEAQNAALRNEIPVGAVAV--LNNKIISRAGNRNRE---LKDVTAHAEILAIRM------ 61
           ++A  +       +GA  V     K++ R  NR        D   HAE+  +        
Sbjct: 62  KQAIVSLKAGSGGIGACLVDARTGKVVERGRNRQYSPYFRSD--MHAEMDLLNRYEDRLK 119

Query: 62  ---GCRILSQEI-LPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFY 117
              G           ++ L+ + EPC MC   I  + I+R+YY   + +GG         
Sbjct: 120 KKGGSNSSGDPRQCGDLILFTSTEPCPMCLTRIINSGIQRMYYLNPDMEGGMAHRMEHL- 178

Query: 118 TLATCHHSPEIYPGISEQRSR 138
                           +    
Sbjct: 179 --PKFWREFAAGRDFRQAECS 197


>gi|261187467|ref|XP_002620157.1| deoxycytidylate deaminase [Ajellomyces dermatitidis SLH14081]
 gi|239594207|gb|EEQ76788.1| deoxycytidylate deaminase [Ajellomyces dermatitidis SLH14081]
 gi|327356490|gb|EGE85347.1| deoxycytidylate deaminase [Ajellomyces dermatitidis ATCC 18188]
          Length = 356

 Score = 61.5 bits (149), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 28/122 (22%), Positives = 37/122 (30%), Gaps = 31/122 (25%)

Query: 4   GNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGNRN-RELKDV---------- 50
              FM  A   AQ +    R    VG V V   +++S   N   R  K+           
Sbjct: 187 DQYFMQLASLAAQRSNCMKRR---VGCVLVRGKRVMSTGYNGTPRNTKNCNEGGCPRCNS 243

Query: 51  ------------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98
                         HAE  A+    R    E      LY    PC  C+  I+   I  +
Sbjct: 244 GEGGGAALSTCLCIHAEENALLEAGRERIGE---GAILYCNTCPCLTCSVKIAQLGISEV 300

Query: 99  YY 100
            Y
Sbjct: 301 VY 302


>gi|224136175|ref|XP_002322258.1| predicted protein [Populus trichocarpa]
 gi|222869254|gb|EEF06385.1| predicted protein [Populus trichocarpa]
          Length = 229

 Score = 61.5 bits (149), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 29/125 (23%), Positives = 42/125 (33%), Gaps = 33/125 (26%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKII-SRAGN-------------- 42
           +   + FM+ A   A+ +      P   VGA  V  N II     N              
Sbjct: 69  LSWDDYFMAIAFLSAERSKD----PNRQVGACLVSQNGIILGIGYNGFPRGCSDDKLPWA 124

Query: 43  RNRELKDVT-------AHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARI 95
           +  +  D          HAE+ AI       +        LYVT+ PC  CA  I  + +
Sbjct: 125 KKSKSGDPLETKYPYVCHAEVNAILNTNHASA----AGQKLYVTMFPCNECAKIIIQSGV 180

Query: 96  RRLYY 100
             + Y
Sbjct: 181 SEVIY 185


>gi|118483842|gb|ABK93812.1| unknown [Populus trichocarpa]
          Length = 229

 Score = 61.5 bits (149), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 29/125 (23%), Positives = 42/125 (33%), Gaps = 33/125 (26%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKII-SRAGN-------------- 42
           +   + FM+ A   A+ +      P   VGA  V  N II     N              
Sbjct: 69  LSWDDYFMAIAFLSAERSKD----PNRQVGACLVSQNGIILGIGYNGFPRGCSDDKLPWA 124

Query: 43  RNRELKDVT-------AHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARI 95
           +  +  D          HAE+ AI       +        LYVT+ PC  CA  I  + +
Sbjct: 125 KKSKSGDPLETKYPYVCHAEVNAILNTNHASA----AGQKLYVTMFPCNECAKIIIQSGV 180

Query: 96  RRLYY 100
             + Y
Sbjct: 181 SEVIY 185


>gi|239609238|gb|EEQ86225.1| deoxycytidylate deaminase [Ajellomyces dermatitidis ER-3]
          Length = 356

 Score = 61.5 bits (149), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 28/122 (22%), Positives = 37/122 (30%), Gaps = 31/122 (25%)

Query: 4   GNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGNRN-RELKDV---------- 50
              FM  A   AQ +    R    VG V V   +++S   N   R  K+           
Sbjct: 187 DQYFMQLASLAAQRSNCMKRR---VGCVLVRGKRVMSTGYNGTPRNTKNCNEGGCPRCNS 243

Query: 51  ------------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98
                         HAE  A+    R    E      LY    PC  C+  I+   I  +
Sbjct: 244 GEGGGAALSTCLCIHAEENALLEAGRERIGE---GAILYCNTCPCLTCSVKIAQLGISEV 300

Query: 99  YY 100
            Y
Sbjct: 301 VY 302


>gi|58617314|ref|YP_196513.1| hypothetical protein ERGA_CDS_05870 [Ehrlichia ruminantium str.
           Gardel]
 gi|58416926|emb|CAI28039.1| Hypothetical protein ERGA_CDS_05870 [Ehrlichia ruminantium str.
           Gardel]
          Length = 62

 Score = 61.5 bits (149), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 28/59 (47%), Positives = 38/59 (64%), Gaps = 2/59 (3%)

Query: 85  MCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQD 143
           MCA AIS  RI RLY+G  N K GG+ENG + +    CH  PE+Y GI E+ + ++I +
Sbjct: 1   MCAQAISFTRIHRLYFGVYNKKYGGVENGARVF--HFCHSIPEVYGGILEEENMKLITN 57


>gi|310722526|ref|YP_003969349.1| Cd dCMP deaminase [Aeromonas phage phiAS5]
 gi|306021369|gb|ADM79903.1| Cd dCMP deaminase [Aeromonas phage phiAS5]
          Length = 182

 Score = 61.5 bits (149), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 26/115 (22%), Positives = 38/115 (33%), Gaps = 42/115 (36%)

Query: 26  VGAVAVLNNKIISRAGNRNRELK----------------DVTA----------------- 52
           VGA+   +++ IS   N     +                DV                   
Sbjct: 24  VGAIIAKDDRPISSGYNGTVSDQPNCDEVALDNGWAEYVDVPGVGKELRLREDKSDDYSA 83

Query: 53  -------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
                  HAE+ AI    R    + +    +Y T+ PC  CA  I+ +RIR L Y
Sbjct: 84  WAKSNVIHAEMNAILFAAR--GGKSIEGATMYCTMAPCPDCAKMIAQSRIRTLVY 136


>gi|291336300|gb|ADD95862.1| hypothetical protein [uncultured organism MedDCM-OCT-S12-C54]
          Length = 212

 Score = 61.5 bits (149), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 25/138 (18%), Positives = 40/138 (28%), Gaps = 21/138 (15%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAV---------LNNKIISRAGNRNRELKDVT--- 51
              +M  A   +Q++       VG   V             +I    N    L       
Sbjct: 35  DENYMDLAFLLSQSSTATGR--VGCAIVSGVRDGAAKDQGSVIVCGVNS--GLYSPLKAD 90

Query: 52  AHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIE 111
            HAE  AI       S   L     YV+  PC  C + ++++ I R+         G + 
Sbjct: 91  CHAEANAI--AESAASGWPLRGATCYVSKPPCNHCFSLLAVSGIARIVSAGP---FGAVG 145

Query: 112 NGTQFYTLATCHHSPEIY 129
           +  Q            + 
Sbjct: 146 SVKQELVAQQLGIECSVV 163


>gi|282883351|ref|ZP_06291944.1| ComE operon protein 2 [Peptoniphilus lacrimalis 315-B]
 gi|300813982|ref|ZP_07094275.1| putative ComE operon protein 2 [Peptoniphilus sp. oral taxon 836
           str. F0141]
 gi|281296762|gb|EFA89265.1| ComE operon protein 2 [Peptoniphilus lacrimalis 315-B]
 gi|300511876|gb|EFK39083.1| putative ComE operon protein 2 [Peptoniphilus sp. oral taxon 836
           str. F0141]
          Length = 139

 Score = 61.5 bits (149), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 31/118 (26%), Positives = 44/118 (37%), Gaps = 21/118 (17%)

Query: 1   MKK--GNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRN-----------RE 46
           M+K     FM      AQ +       VG V V  +++I+S   N               
Sbjct: 1   MRKSWDEYFMEITQLVAQRSTCDRAF-VGCVLVNSDHRIVSTGYNGTASGNPHCIDVGHR 59

Query: 47  LKD----VTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
           ++D     T HAE+ A+ + C             YVT  PC  C  A+  A I  +YY
Sbjct: 60  MRDGHCIATIHAEMNAL-LYCAKEGIPA-KGSICYVTHFPCLNCTKALIQAGISAIYY 115


>gi|89890037|ref|ZP_01201548.1| deoxycytidylate deaminase [Flavobacteria bacterium BBFL7]
 gi|89518310|gb|EAS20966.1| deoxycytidylate deaminase [Flavobacteria bacterium BBFL7]
          Length = 141

 Score = 61.5 bits (149), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 34/147 (23%), Positives = 51/147 (34%), Gaps = 37/147 (25%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTA--------- 52
           K    ++  A E A+ +       VGA+ V +  IIS   N        +          
Sbjct: 8   KYDIAYLKMAAEWAKLSHCNR-RQVGALIVRDRMIISDGYNGT-----PSGFENFCEDEE 61

Query: 53  --------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY--GA 102
                   HAE  AI       S +      LY+T+ PC  C+  I  + I+R+ Y  G 
Sbjct: 62  GYTKWYVLHAEANAILKVA--GSTQSCAGATLYITMSPCKDCSKLIHQSGIKRVVYVEGY 119

Query: 103 SNPKGGGIENGTQFYTLATCHHSPEIY 129
            +       +G QF   A      E+ 
Sbjct: 120 KDD------SGLQFLQKAG----VEVE 136


>gi|320591187|gb|EFX03626.1| deoxycytidylate deaminase [Grosmannia clavigera kw1407]
          Length = 387

 Score = 61.5 bits (149), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 29/123 (23%), Positives = 40/123 (32%), Gaps = 29/123 (23%)

Query: 4   GNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGNRN-RELKDV---------- 50
              FMS A   AQ +    R    VG V V  ++++S   N   R L++           
Sbjct: 229 DRYFMSLASLAAQRSNCMKRR---VGCVLVREHRVVSTGYNGTPRGLRNCGEGGCGRCNG 285

Query: 51  ------------TAHAEILAIRMGCR-ILSQEILPEVDLYVTLEPCTMCAAAISLARIRR 97
                         HAE  A+    R  +    L    LY    PC  C+  I    I  
Sbjct: 286 GFGAGLSLATCLCLHAEENALLEAGRERIPTASLANTILYCDTCPCLTCSIKIVQVGIGE 345

Query: 98  LYY 100
           + Y
Sbjct: 346 VVY 348


>gi|225155324|ref|ZP_03723817.1| CMP/dCMP deaminase zinc-binding [Opitutaceae bacterium TAV2]
 gi|224803931|gb|EEG22161.1| CMP/dCMP deaminase zinc-binding [Opitutaceae bacterium TAV2]
          Length = 163

 Score = 61.1 bits (148), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 28/112 (25%), Positives = 43/112 (38%), Gaps = 18/112 (16%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAV----LNNKIISRAGN----------RNRELK- 48
            + FM+ A+  +  +       VG V V      N++++   N          R R+   
Sbjct: 28  DDYFMATAVLLSTRSPCERLH-VGCVLVSGGARPNRLVAAGYNGYLPGTPHVSRVRDGHE 86

Query: 49  DVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
             T HAE  A+    R  S   L     YVT  PC  CA  ++ A I  + +
Sbjct: 87  QATVHAEQNAVADAARRGSS--LEGCVAYVTHFPCINCAKILAAAGIAEIRF 136


>gi|32266337|ref|NP_860369.1| riboflavin biosynthesis protein RibD [Helicobacter hepaticus ATCC
           51449]
 gi|32262387|gb|AAP77435.1| riboflavin biosynthesis protein RibD [Helicobacter hepaticus ATCC
           51449]
          Length = 348

 Score = 61.1 bits (148), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 27/127 (21%), Positives = 46/127 (36%), Gaps = 34/127 (26%)

Query: 26  VGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEI-------------- 70
           VGA+ V    +I+S+A ++       + HAE+LAI+     LS +               
Sbjct: 31  VGALVVDKYGQILSQAVHKVA----GSPHAEVLAIQAAYHTLSGDDEIVKLHKSKDIHTY 86

Query: 71  --------LPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116
                     E  LYV+LEPC        C+  +S     R+    ++        G  +
Sbjct: 87  LLAHHNGLFKECTLYVSLEPCNHYGKTPPCSQLLSSLGFSRVCIATNDTHALAAG-GANY 145

Query: 117 YTLATCH 123
            +    +
Sbjct: 146 LSQVGIN 152


>gi|327198164|ref|YP_004306740.1| putative dCMP deaminase [Pseudomonas phage KPP10]
 gi|297591690|dbj|BAJ09110.1| putative dCMP deaminase [Pseudomonas phage KPP10]
          Length = 129

 Score = 61.1 bits (148), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 29/87 (33%), Positives = 37/87 (42%), Gaps = 14/87 (16%)

Query: 26  VGAVAVLNNKIISRAGN-----------RNRELKDV-TAHAEILAIRMGCRILSQEILPE 73
           VGAV V  NKIIS+  N               +      HAE  A+       SQE    
Sbjct: 18  VGAVIVQGNKIISQGYNGLPGGLEGPLENEEGVTRPEVRHAEKNAL--LWLSCSQESAQG 75

Query: 74  VDLYVTLEPCTMCAAAISLARIRRLYY 100
             ++ T+ PC  CA  I  A I+R+YY
Sbjct: 76  AWMFATMSPCEYCAHDIVDAGIKRVYY 102


>gi|213408261|ref|XP_002174901.1| deoxycytidylate deaminase [Schizosaccharomyces japonicus yFS275]
 gi|212002948|gb|EEB08608.1| deoxycytidylate deaminase [Schizosaccharomyces japonicus yFS275]
          Length = 320

 Score = 61.1 bits (148), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 27/123 (21%), Positives = 40/123 (32%), Gaps = 27/123 (21%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRN-RELKD-----VTA----- 52
              FM  A   A   +   +  VG V V + ++I+   N   R L++      T      
Sbjct: 173 DAYFMQLA-SLASMRSNCMKRRVGCVLVRDQRVIATGYNGTPRGLRNCNEGGCTRCNSAA 231

Query: 53  ------------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
                       HAE  A+    R    +      LY    PC  C+  I+   I  + Y
Sbjct: 232 KSGIGLGTCLCLHAEENALLEAGRERIGDR---GILYCNTCPCLTCSVKIAQVGISEVVY 288

Query: 101 GAS 103
             S
Sbjct: 289 STS 291


>gi|116180106|ref|XP_001219902.1| hypothetical protein CHGG_00681 [Chaetomium globosum CBS 148.51]
 gi|88184978|gb|EAQ92446.1| hypothetical protein CHGG_00681 [Chaetomium globosum CBS 148.51]
          Length = 393

 Score = 61.1 bits (148), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 30/124 (24%), Positives = 40/124 (32%), Gaps = 34/124 (27%)

Query: 4   GNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGNRN-RELKDV---------- 50
              FMS A   AQ +    R    VG V V + ++IS   N   R L++           
Sbjct: 239 DAYFMSLASLAAQRSNCMKRR---VGCVVVRDKRVISTGYNGTPRGLRNCGEGGCARCNA 295

Query: 51  -------------TAHAEILAIRMGCRILSQEILP-EVDLYVTLEPCTMCAAAISLARIR 96
                          HAE  A+    R    E L     LY    PC  C+  I    + 
Sbjct: 296 GEGGSGHGLATCLCIHAEENALLEAGR----ERLRDGAVLYCDTCPCLTCSIKIVQVGVG 351

Query: 97  RLYY 100
            + Y
Sbjct: 352 EVVY 355


>gi|161622500|ref|YP_001595339.1| Cd dCMP deaminase [Enterobacteria phage JS98]
 gi|238695364|ref|YP_002922557.1| Cd dCMP deaminase [Enterobacteria phage JS10]
 gi|160213806|gb|ABX11145.1| Cd dCMP deaminase [Enterobacteria phage JS98]
 gi|220029500|gb|ACL78434.1| Cd dCMP deaminase [Enterobacteria phage JS10]
          Length = 181

 Score = 61.1 bits (148), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 30/117 (25%), Positives = 40/117 (34%), Gaps = 43/117 (36%)

Query: 26  VGAVAVLNNKIISRAGN----------RNRELKDVTA----------------------- 52
           VGAV   N +IIS   N           +   +D T                        
Sbjct: 24  VGAVIEKNGRIISTGYNGSPSGGVNCCDHAVEQDWTRVVYDTARMSHKSILLKEHRMAHA 83

Query: 53  --------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
                   HAE+ AI    R  S   +    +YVTL PC  CA +I+ + I+ L Y 
Sbjct: 84  AWSSKNEIHAELNAILFAARTGSS--IDGATMYVTLSPCADCAKSIAQSGIKTLVYA 138


>gi|51245792|ref|YP_065676.1| hypothetical protein DP1940 [Desulfotalea psychrophila LSv54]
 gi|50876829|emb|CAG36669.1| hypothetical protein DP1940 [Desulfotalea psychrophila LSv54]
          Length = 164

 Score = 61.1 bits (148), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 28/106 (26%), Positives = 44/106 (41%), Gaps = 8/106 (7%)

Query: 8   MSCALEEAQNA-ALRNEIPVGAVAVL--NNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           M+  +E ++         P  A      + +++    NR   L   +AHAE++AI +  +
Sbjct: 1   MAAVIEFSRQNIRQETGGPFAAGIFEKESGRLVMLGVNRVMPLNCSSAHAEVMAISLAQQ 60

Query: 65  ILSQEIL-----PEVDLYVTLEPCTMCAAAISLARIRRLYYGASNP 105
            L    L     PE +L V   PC MC  A+  +  R L    S P
Sbjct: 61  KLENFDLGAPGMPEHELVVNWRPCIMCLGALMWSGARHLTIAGSGP 106


>gi|255711598|ref|XP_002552082.1| KLTH0B06776p [Lachancea thermotolerans]
 gi|238933460|emb|CAR21644.1| KLTH0B06776p [Lachancea thermotolerans]
          Length = 335

 Score = 61.1 bits (148), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 27/119 (22%), Positives = 35/119 (29%), Gaps = 28/119 (23%)

Query: 4   GNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGNRNRE--------------L 47
              FM  A   A  +    R    VG V V + ++I+   N                   
Sbjct: 188 DTYFMKLATLAASRSNCMKRR---VGCVIVRDCRVIATGYNGTPRHLVNCHSGGCPRCNN 244

Query: 48  KDV------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
            D         HAE  A+    R       P   LY    PC  C+  I    IR + Y
Sbjct: 245 GDAQLHACLCLHAEENALLEAGRDRVG---PNAILYCDTCPCLTCSVKIVQTGIREVVY 300


>gi|332519190|ref|ZP_08395657.1| CMP/dCMP deaminase, zinc-binding [Lacinutrix algicola 5H-3-7-4]
 gi|332045038|gb|EGI81231.1| CMP/dCMP deaminase, zinc-binding [Lacinutrix algicola 5H-3-7-4]
          Length = 143

 Score = 61.1 bits (148), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 32/135 (23%), Positives = 48/135 (35%), Gaps = 23/135 (17%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRN-RELKDV---------- 50
           K    ++  A E  + +  + +  VGA+ V +  IIS   N      ++           
Sbjct: 8   KYDKAYLRIAQEWGKLSHCKRKQ-VGALIVKDRMIISDGFNGTPTGFENPCEDEEGYTKW 66

Query: 51  -TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY--GASNPKG 107
              HAE  AI                LY+TL PC  C+  I  A I R+ Y  G  +   
Sbjct: 67  YVLHAEANAILKVASSTQS--CNGATLYITLSPCKECSKLIHQAGIIRVVYKEGYKDD-- 122

Query: 108 GGIENGTQFYTLATC 122
               +G +F   A  
Sbjct: 123 ----SGLRFLEKAGI 133


>gi|220904883|ref|YP_002480195.1| CMP/dCMP deaminase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
 gi|219869182|gb|ACL49517.1| CMP/dCMP deaminase zinc-binding [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
          Length = 158

 Score = 61.1 bits (148), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 24/104 (23%), Positives = 37/104 (35%), Gaps = 25/104 (24%)

Query: 26  VGAVAVLNNKIISRAGN--------------RNRELKDVTA---------HAEILAIRMG 62
           VGAVAV + +I++   N                 ++   +          HAE   I   
Sbjct: 28  VGAVAVKDKRILATGYNGAPAGVPHCLEVGCLREQMGIPSGQRHEICRGLHAEQNVIIQA 87

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPK 106
              +    +   +LY T  PC  C+  +    IRR+YY    P 
Sbjct: 88  A--VHGINISGAELYCTTHPCVQCSKMLINCGIRRIYYAEHYPD 129


>gi|220918025|ref|YP_002493329.1| riboflavin biosynthesis protein RibD [Anaeromyxobacter dehalogenans
           2CP-1]
 gi|219955879|gb|ACL66263.1| riboflavin biosynthesis protein RibD [Anaeromyxobacter dehalogenans
           2CP-1]
          Length = 392

 Score = 61.1 bits (148), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 34/149 (22%), Positives = 57/149 (38%), Gaps = 21/149 (14%)

Query: 5   NVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
             FM  A+ EA     R      VGAV V + +++ R  +          HAE++     
Sbjct: 26  ERFMRLAVREAARGLGRTSPNPAVGAVVVRDGRVVGRGHHARAGG----PHAEVV----- 76

Query: 63  CRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116
               +  +    D+Y TLEPC        C+ A+  A +RR++ G+S+P       G   
Sbjct: 77  ALRAAGALARGADVYTTLEPCDHFGKTPPCSVALLEAGVRRVFVGSSDPNPLVNGRGMAR 136

Query: 117 YTLATCHHSPEIYPGISEQRSRQIIQDFF 145
                  H   +  G+      ++   +F
Sbjct: 137 LR----RHGVAVVKGVLRDACDRLNAPWF 161


>gi|168495122|ref|YP_001686860.1| dCMP deaminase [Azospirillum phage Cd]
 gi|46241683|gb|AAS83068.1| dCMP deaminase-like protein [Azospirillum brasilense]
 gi|168148881|emb|CAO99345.1| dCMP deaminase [Azospirillum phage Cd]
          Length = 167

 Score = 61.1 bits (148), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 29/114 (25%), Positives = 41/114 (35%), Gaps = 23/114 (20%)

Query: 4   GNVFMSCALEEAQNAALRNEIP---VGAVAVLN-NKIISRAGNRNRELKDV--------- 50
              FM+ A  +A  +      P   VGAV V    +I +   NR    +D          
Sbjct: 27  DQRFMTYARHQAAKSKD----PCKQVGAVVVGPLGEIRAIGHNRLPGDRDCPDTYADKRR 82

Query: 51  ----TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
                 HAE++AI    R      L    L+VT   C  CA  +  A I  + +
Sbjct: 83  KRERIVHAEVVAITSAARAGVA--LDGGTLFVTHPCCADCARMLVEAGIVEVVW 134


>gi|145603432|ref|XP_001404560.1| hypothetical protein MGG_13228 [Magnaporthe oryzae 70-15]
 gi|145011664|gb|EDJ96320.1| hypothetical protein MGG_13228 [Magnaporthe oryzae 70-15]
          Length = 180

 Score = 61.1 bits (148), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 22/95 (23%), Positives = 35/95 (36%), Gaps = 14/95 (14%)

Query: 3   KGNVFMSCALEEAQNAA-LRNEIPVGAVAV--LNNKIISRAGNRNRELK----DVTAHAE 55
               FM  A+EEA+ +     +  VGAV V      ++SR             + + HAE
Sbjct: 14  NHEEFMKLAIEEARRSRPDPGKFCVGAVLVNEDTGDVLSRGYYLEYPEDYNGSNGSVHAE 73

Query: 56  ILAIRMGCRILSQEIL-------PEVDLYVTLEPC 83
            + +     +             P   +Y T+EPC
Sbjct: 74  RVCLIKAAELYGVSETELGAALPPNCAIYTTMEPC 108


>gi|86159164|ref|YP_465949.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase /
           diaminohydroxyphosphoribosylaminopyrimidine deaminase
           [Anaeromyxobacter dehalogenans 2CP-C]
 gi|85775675|gb|ABC82512.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase /
           diaminohydroxyphosphoribosylaminopyrimidine deaminase
           [Anaeromyxobacter dehalogenans 2CP-C]
          Length = 392

 Score = 61.1 bits (148), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 37/154 (24%), Positives = 59/154 (38%), Gaps = 24/154 (15%)

Query: 7   FMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           FM  AL EA     R      VGAV V + +++ R  +          HAE++       
Sbjct: 28  FMRLALREAARGLGRTSPNPAVGAVVVRDGRVVGRGHHARAGG----PHAEVV-----AL 78

Query: 65  ILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
             +  +    D+Y TLEPC        C+ A+  A +RR++ G+S+P       G     
Sbjct: 79  RAAGALARGADVYTTLEPCDHFGKTPPCSVALLEAGVRRVFVGSSDPNPLVNGRGMARLR 138

Query: 119 LATCHHSPEIYPGISEQRSRQIIQ---DFFKERR 149
            +       +  G+      ++      F  ERR
Sbjct: 139 RSG----VAVVKGVLRDDCDRLNAPWFTFITERR 168


>gi|326804375|ref|YP_004327179.1| hypothetical protein PsPhPAKP1_gp034 [Pseudomonas phage PAK_P1]
 gi|290873788|gb|ADD64991.1| hypothetical protein ORF_0034 [Pseudomonas phage PAK_P1]
 gi|294998930|gb|ADF58244.1| putative dCMP deaminase [Pseudomonas phage JG004]
          Length = 138

 Score = 61.1 bits (148), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 29/87 (33%), Positives = 36/87 (41%), Gaps = 14/87 (16%)

Query: 26  VGAVAVLNNKIISRAGN-RNRELKDVT-----------AHAEILAIRMGCRILSQEILPE 73
           VGAV V  N+IIS   N     L                HAE  A+R   R  S E    
Sbjct: 27  VGAVLVKRNRIISCGYNALPEHLNGPLEDETGVTKAEVRHAEENALRALIR--SPESAQG 84

Query: 74  VDLYVTLEPCTMCAAAISLARIRRLYY 100
             L+VT   C  CA ++  A I+ +YY
Sbjct: 85  ATLFVTHSCCKNCAISVVEAGIKVVYY 111


>gi|224011555|ref|XP_002295552.1| dCMP deaminase [Thalassiosira pseudonana CCMP1335]
 gi|209583583|gb|ACI64269.1| dCMP deaminase [Thalassiosira pseudonana CCMP1335]
          Length = 176

 Score = 61.1 bits (148), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 31/120 (25%), Positives = 43/120 (35%), Gaps = 25/120 (20%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNK-IISRAGN-------------RNRE 46
           +   + FM+ +   AQ +   N   VGA  V  NK II    N                 
Sbjct: 21  LSWDDYFMAVSFLSAQRSKDPN-TQVGACIVDTNKSIIGIGYNGFPRGCSDEHLPWARHA 79

Query: 47  LKDV------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
             D+        HAE+ AI   C       +    +YV L PC  C+  I  + IR + Y
Sbjct: 80  SCDLHKKYPYVVHAEVNAILNKCSA----SVRGATIYVALFPCNECSKVIIQSGIREVVY 135


>gi|23099435|ref|NP_692901.1| late competence protein [Oceanobacillus iheyensis HTE831]
 gi|22777664|dbj|BAC13936.1| late competence protein (DNA binding and uptake) [Oceanobacillus
           iheyensis HTE831]
          Length = 186

 Score = 61.1 bits (148), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 24/91 (26%), Positives = 34/91 (37%), Gaps = 17/91 (18%)

Query: 26  VGAVAVLNNKIISRAGNRNRELK-----------DV----TAHAEILAIRMGCRILSQEI 70
           VGA  V + +II+   N +               D     T HAE  A+    +      
Sbjct: 28  VGATIVRDKRIIAGGYNGSVTGSVHCTDEGCYVIDGHCVRTVHAEANALLQCAKFGVPT- 86

Query: 71  LPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
               D+YVT  PC  C   +  + IR +YY 
Sbjct: 87  -EGADVYVTHFPCLQCTKQLIQSGIRTVYYA 116


>gi|297819466|ref|XP_002877616.1| cytidine/deoxycytidylate deaminase family protein [Arabidopsis
           lyrata subsp. lyrata]
 gi|297323454|gb|EFH53875.1| cytidine/deoxycytidylate deaminase family protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 232

 Score = 60.7 bits (147), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 28/125 (22%), Positives = 41/125 (32%), Gaps = 33/125 (26%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKII-SRAGN-------------- 42
           +   + FM+ A   A+ +      P   VGA  V  N +I     N              
Sbjct: 66  LSWDDYFMAIAFLSAERSKD----PNRQVGACLVSQNGVILGIGYNGFPRGCSDDKLPWA 121

Query: 43  RNRELKDVT-------AHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARI 95
           +     D          HAE+ AI       +        LYVT+ PC  CA  I  + +
Sbjct: 122 KKSRTGDPLETKYPYVCHAEVNAILNTNHASA----AGQKLYVTMFPCNECAKIILQSGV 177

Query: 96  RRLYY 100
             + Y
Sbjct: 178 AEVIY 182


>gi|116831274|gb|ABK28591.1| unknown [Arabidopsis thaliana]
          Length = 233

 Score = 60.7 bits (147), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 28/125 (22%), Positives = 41/125 (32%), Gaps = 33/125 (26%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKII-SRAGN-------------- 42
           +   + FM+ A   A+ +      P   VGA  V  N +I     N              
Sbjct: 66  LSWDDYFMAIAFLSAERSKD----PNRQVGACLVSQNGVILGIGYNGFPRGCSDDKLPWA 121

Query: 43  RNRELKDVT-------AHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARI 95
           +     D          HAE+ AI       +        LYVT+ PC  CA  I  + +
Sbjct: 122 KKSRTGDPLETKYPYVCHAEVNAILNTNHASA----AGQKLYVTMFPCNECAKIILQSGV 177

Query: 96  RRLYY 100
             + Y
Sbjct: 178 AEVIY 182


>gi|42565719|ref|NP_190423.2| cytidine/deoxycytidylate deaminase family protein [Arabidopsis
           thaliana]
 gi|91806546|gb|ABE66000.1| cytidine/deoxycytidylate deaminase family protein [Arabidopsis
           thaliana]
 gi|332644907|gb|AEE78428.1| dCMP deaminase [Arabidopsis thaliana]
          Length = 232

 Score = 60.7 bits (147), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 28/125 (22%), Positives = 41/125 (32%), Gaps = 33/125 (26%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKII-SRAGN-------------- 42
           +   + FM+ A   A+ +      P   VGA  V  N +I     N              
Sbjct: 66  LSWDDYFMAIAFLSAERSKD----PNRQVGACLVSQNGVILGIGYNGFPRGCSDDKLPWA 121

Query: 43  RNRELKDVT-------AHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARI 95
           +     D          HAE+ AI       +        LYVT+ PC  CA  I  + +
Sbjct: 122 KKSRTGDPLETKYPYVCHAEVNAILNTNHASA----AGQKLYVTMFPCNECAKIILQSGV 177

Query: 96  RRLYY 100
             + Y
Sbjct: 178 AEVIY 182


>gi|291513963|emb|CBK63173.1| Pyrimidine reductase, riboflavin biosynthesis [Alistipes shahii WAL
           8301]
          Length = 359

 Score = 60.7 bits (147), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 31/148 (20%), Positives = 49/148 (33%), Gaps = 25/148 (16%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIP------VGAVAVLNNKIISRAGNRNRELKDVTAHAE 55
            +   +++ A+ E         +P      VGAV  L +    R+          T HAE
Sbjct: 215 DEDLRYLTQAVAEGLRC-----VPSRTSYCVGAVVALPD---GRSFTGYTHETSPTHHAE 266

Query: 56  ILAIRMGCRILSQEILPEVDLYVTLEPCTM-------CAAAISLARIRRLYYGASNPKGG 108
             AIR    + +   L    +Y ++EPC+        C   I      R+ +    P   
Sbjct: 267 QEAIRKA--LDAGAELRGAAIYSSMEPCSQRKSEPESCTQLILRHGFARVVFALYEPDRF 324

Query: 109 GIENGTQFYTLATCHHS--PEIYPGISE 134
               G Q    A       PE+  G+  
Sbjct: 325 VRCRGAQTLREAGVDVRVYPELAEGVRR 352


>gi|331002521|ref|ZP_08326039.1| hypothetical protein HMPREF0491_00901 [Lachnospiraceae oral taxon
           107 str. F0167]
 gi|330410337|gb|EGG89771.1| hypothetical protein HMPREF0491_00901 [Lachnospiraceae oral taxon
           107 str. F0167]
          Length = 164

 Score = 60.7 bits (147), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 34/131 (25%), Positives = 49/131 (37%), Gaps = 35/131 (26%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVL-NNKIISRAGN-------------- 42
           +     F+  A   A+ +      P   VGA  V  +NKI+S   N              
Sbjct: 9   INWDEYFIGVAKLSARRSKD----PSTQVGACIVSEDNKILSMGYNGFPRGCSDEDFPWG 64

Query: 43  RNRELKDV-------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARI 95
           +  E+ D        + H+E+ AI           L    +YVTL PC  CA AI  A I
Sbjct: 65  KEYEITDPYNAKYLYSTHSELNAILN----YRGGSLEGSKIYVTLFPCNECAKAIIQAGI 120

Query: 96  RRLYYGASNPK 106
           + + Y   + K
Sbjct: 121 KTIIY--EDDK 129


>gi|325678499|ref|ZP_08158114.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Ruminococcus albus 8]
 gi|324109810|gb|EGC04011.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Ruminococcus albus 8]
          Length = 248

 Score = 60.7 bits (147), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 31/125 (24%), Positives = 49/125 (39%), Gaps = 31/125 (24%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLN-NKIISRAGNR----NRELKDV-- 50
           +   + F+  A    + +A R++ P   VGA  V   NKI+S   N       + +    
Sbjct: 8   ISWDDYFLGIA----ELSAARSKDPNTQVGACIVSEENKILSLGYNGMPAGCNDDEMPWG 63

Query: 51  ------------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98
                         HAE+ A+     + S   L    +YV+L PC  CA AI  + I+ +
Sbjct: 64  REGDFLDTKYPFVCHAELNAV-----LNSNHDLKGSRIYVSLFPCNECAKAIIQSGIKEV 118

Query: 99  YYGAS 103
            Y   
Sbjct: 119 IYTCD 123


>gi|332376376|gb|AEE63328.1| unknown [Dendroctonus ponderosae]
          Length = 222

 Score = 60.7 bits (147), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 27/121 (22%), Positives = 44/121 (36%), Gaps = 35/121 (28%)

Query: 5   NVFMSCALEEAQNAALRNEIP---VGAVAV-LNNKIISRAGNRNRELKDVTA-------- 52
           + FM+ A   A+ +      P   VGA  V  +N I+    N     K+ +         
Sbjct: 22  DYFMATAFLAAKRSKD----PCSQVGACIVNEDNVIVGIGYNG--MPKNCSDDEFPWSKG 75

Query: 53  -------------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLY 99
                        HAE+ AI       +   +    +YV L PC  CA  I  + ++++ 
Sbjct: 76  SKSDLDNKYLYVCHAELNAILN----KNSVDVRNCTMYVGLFPCNECAKVIIQSGVKQII 131

Query: 100 Y 100
           Y
Sbjct: 132 Y 132


>gi|119480441|ref|XP_001260249.1| deoxycytidylate deaminase [Neosartorya fischeri NRRL 181]
 gi|119408403|gb|EAW18352.1| deoxycytidylate deaminase [Neosartorya fischeri NRRL 181]
          Length = 362

 Score = 60.7 bits (147), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 28/122 (22%), Positives = 35/122 (28%), Gaps = 31/122 (25%)

Query: 4   GNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGN-------RNRELKDV---- 50
              FM  A   AQ +    R    VG V V   ++IS   N          E        
Sbjct: 190 DLYFMQLASLAAQRSNCMKRR---VGCVLVRERRVISTGYNGTPRHLTNCNEGGCPRCNR 246

Query: 51  ------------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98
                         HAE  A+    R   +E      LY    PC  C   I+   I  +
Sbjct: 247 GEGGGVGLSTCLCLHAEENALLEAGRERIRE---GSILYCDTCPCLTCTVKIAQVGISEV 303

Query: 99  YY 100
            Y
Sbjct: 304 VY 305


>gi|149921258|ref|ZP_01909714.1| riboflavin-specific deaminase
           (diaminohydroxyphosphoribosylaminopyrimidine deaminase
           [Plesiocystis pacifica SIR-1]
 gi|149817918|gb|EDM77380.1| riboflavin-specific deaminase
           (diaminohydroxyphosphoribosylaminopyrimidine deaminase
           [Plesiocystis pacifica SIR-1]
          Length = 366

 Score = 60.7 bits (147), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 40/146 (27%), Positives = 56/146 (38%), Gaps = 27/146 (18%)

Query: 6   VFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTA--HAEILAIR 60
            +M  AL  A++       P   VGAV V    ++ R         DVT   HAE+ A+R
Sbjct: 10  HWMGHALRLAKSGTGAT-YPNPCVGAVLVKKGVVVGRGR------SDVTGGPHAEVRALR 62

Query: 61  MGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGT 114
                          +YVTLEPC        C  AI  A +RR+  G  +P       G 
Sbjct: 63  QAGAAARGAA-----MYVTLEPCSHRGRTPPCVDAIIEAGVRRVCIGVEDPAPHVGGKGI 117

Query: 115 QFYTLATCHHSPEIYPGISEQRSRQI 140
           +    A      E+  G+   ++R I
Sbjct: 118 RKLRRAGL----EVEVGVCGDQARSI 139


>gi|322712548|gb|EFZ04121.1| nucleoside deaminase [Metarhizium anisopliae ARSEF 23]
          Length = 254

 Score = 60.7 bits (147), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 30/142 (21%), Positives = 47/142 (33%), Gaps = 41/142 (28%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLN-----NKIISRAGNRNRELKDVTA 52
           ++  + +M  A   A      N  P    G V V +      +++    N   E  + T 
Sbjct: 21  IETRHYWMRRA-NAALFEVTGNPCPTEAFGTVIVNHTAGGLGELVCVGAND-IESGNPTL 78

Query: 53  HA------------------EILAIRMGCRILSQEI-------------LPEVDLYVTLE 81
           H                   E  AI+    IL+                  ++ LY   E
Sbjct: 79  HGNSPLPMKNKNVANHRESGETAAIKNCTAILTDPHGPYKLSGHEALNAWADLTLYTNAE 138

Query: 82  PCTMCAAAISLARIRRLYYGAS 103
           PC MCAAAI  +  + L +G +
Sbjct: 139 PCPMCAAAIRWSGFKELIFGTT 160


>gi|255540237|ref|XP_002511183.1| deoxycytidylate deaminase, putative [Ricinus communis]
 gi|223550298|gb|EEF51785.1| deoxycytidylate deaminase, putative [Ricinus communis]
          Length = 224

 Score = 60.7 bits (147), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 27/125 (21%), Positives = 42/125 (33%), Gaps = 33/125 (26%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKII-SRAGN-------------- 42
           +   + FM+ A   A+ +      P   VGA  V  N +I     N              
Sbjct: 62  LSWDDYFMAIAFLSAERSKD----PNRQVGACLVSQNGVILGIGYNGFPRGCSDDKLPWA 117

Query: 43  RNRELKDVT-------AHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARI 95
           +  +  +          HAE+ AI       +        LYVT+ PC  CA  I  + +
Sbjct: 118 KKSKTGNPLETKYPYVCHAEVNAILNTNHASA----AGQKLYVTMFPCNECAKIIIQSGV 173

Query: 96  RRLYY 100
             + Y
Sbjct: 174 SEVIY 178


>gi|221059810|ref|XP_002260550.1| Cytidine and deoxycytidylate deaminase-like protein [Plasmodium
           knowlesi strain H]
 gi|193810624|emb|CAQ42522.1| Cytidine and deoxycytidylate deaminase-like protein, putative
           [Plasmodium knowlesi strain H]
          Length = 365

 Score = 60.7 bits (147), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 14/57 (24%), Positives = 31/57 (54%)

Query: 77  YVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGIS 133
           Y++ EPC MCA A+  +RI+ + +   N   G + +  + +++   +H  ++Y  + 
Sbjct: 306 YLSHEPCFMCAMAMVHSRIKCVIFDELNRDNGALFSRAKLHSVKNLNHHFKVYKTVR 362



 Score = 39.5 bits (92), Expect = 0.15,   Method: Composition-based stats.
 Identities = 17/67 (25%), Positives = 28/67 (41%), Gaps = 7/67 (10%)

Query: 1   MKKGNVFMSCALEEAQN-AALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
           +K+   F+  A+   +N    +     G V   N+KII+ +G  +        HA +LAI
Sbjct: 139 IKEFIHFVKIAIRVGKNFGTCQG----GCVLTHNHKIIACSG--DNIKNHPLQHAVMLAI 192

Query: 60  RMGCRIL 66
                 L
Sbjct: 193 EQVSFKL 199


>gi|327412599|emb|CBZ39519.1| cytosine deaminase [Candida dubliniensis]
          Length = 59

 Score = 60.7 bits (147), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 9/54 (16%), Positives = 21/54 (38%), Gaps = 1/54 (1%)

Query: 3  KGNVFMSCALEEAQNAALRNEIPVG-AVAVLNNKIISRAGNRNRELKDVTAHAE 55
               +  AL++A+ +     IP+G  +   +  ++ +  N   +      H E
Sbjct: 6  DDKKGLQIALDQAKKSYFEGGIPIGLCIISSDGTVLGQGHNERIQKHSSILHGE 59


>gi|327412597|emb|CBZ39518.1| cytosine deaminase [Candida dubliniensis]
 gi|327412601|emb|CBZ39520.1| cytosine deaminase [Candida dubliniensis]
 gi|327412603|emb|CBZ39521.1| cytosine deaminase [Candida dubliniensis]
 gi|327412605|emb|CBZ39522.1| cytosine deaminase [Candida dubliniensis]
 gi|327412607|emb|CBZ39523.1| cytosine deaminase [Candida dubliniensis]
 gi|327412609|emb|CBZ39524.1| cytosine deaminase [Candida dubliniensis]
          Length = 59

 Score = 60.7 bits (147), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 9/54 (16%), Positives = 21/54 (38%), Gaps = 1/54 (1%)

Query: 3  KGNVFMSCALEEAQNAALRNEIPVG-AVAVLNNKIISRAGNRNRELKDVTAHAE 55
               +  AL++A+ +     IP+G  +   +  ++ +  N   +      H E
Sbjct: 6  DDKKGLQIALDQAKKSYFEGGIPIGSCIISSDGTVLGQGHNERIQKHSSILHGE 59


>gi|158522092|ref|YP_001529962.1| CMP/dCMP deaminase zinc-binding [Desulfococcus oleovorans Hxd3]
 gi|158510918|gb|ABW67885.1| CMP/dCMP deaminase zinc-binding [Desulfococcus oleovorans Hxd3]
          Length = 155

 Score = 60.7 bits (147), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 31/128 (24%), Positives = 43/128 (33%), Gaps = 30/128 (23%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGN--------------------- 42
              FM      A+ +       VGAV V N ++++   N                     
Sbjct: 15  HTYFMEITELVARRSTCLRRH-VGAVIVKNKRMLATGYNGAPAGVTHCSETGCLRARLNV 73

Query: 43  ---RNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLY 99
                 EL     HAE  AI           +    LY T +PC++CA  I  A I  +Y
Sbjct: 74  PSGERHELCRGI-HAEQNAIIQAAFHGVS--IQGASLYCTNQPCSICAKMIINAGISAVY 130

Query: 100 Y--GASNP 105
           Y  G  +P
Sbjct: 131 YKDGYDDP 138


>gi|260061092|ref|YP_003194172.1| deoxycytidylate deaminase [Robiginitalea biformata HTCC2501]
 gi|88785224|gb|EAR16393.1| deoxycytidylate deaminase [Robiginitalea biformata HTCC2501]
          Length = 150

 Score = 60.7 bits (147), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 38/150 (25%), Positives = 51/150 (34%), Gaps = 31/150 (20%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTA--------- 52
           K    ++  A E  + +  R +  VGA+ V    IIS   N        +          
Sbjct: 8   KYDKAYLRMANEWGKLSYCRRKQ-VGAIIVRERMIISDGYNGT-----PSGFENFCEDEE 61

Query: 53  --------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASN 104
                   HAE  AI                LY+TL PC  C+  I    IRR+ Y    
Sbjct: 62  GYTKWYVLHAEANAISKVASSTQS--CEGATLYITLSPCRECSKLIHQCGIRRVVY---- 115

Query: 105 PKGGGIENGTQFYTLAT--CHHSPEIYPGI 132
            K    ++G QF   A     H P I  G+
Sbjct: 116 QKAYKDDSGLQFLARAGVELVHLPVIDIGV 145


>gi|194754595|ref|XP_001959580.1| GF11973 [Drosophila ananassae]
 gi|190620878|gb|EDV36402.1| GF11973 [Drosophila ananassae]
          Length = 361

 Score = 60.7 bits (147), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 14/66 (21%), Positives = 32/66 (48%), Gaps = 1/66 (1%)

Query: 64  RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123
                 +    D+Y+  EPC MC+ A+  +R +R+++   +   G +    Q +++   +
Sbjct: 287 AKFGPYLCTGYDVYLLQEPCLMCSMALVHSRAKRVFFLRPSDN-GALATRFQLHSVKELN 345

Query: 124 HSPEIY 129
           H  E++
Sbjct: 346 HHFEVF 351


>gi|190405923|gb|EDV09190.1| dCMP deaminase [Saccharomyces cerevisiae RM11-1a]
 gi|256269017|gb|EEU04358.1| Dcd1p [Saccharomyces cerevisiae JAY291]
 gi|323333286|gb|EGA74684.1| Dcd1p [Saccharomyces cerevisiae AWRI796]
 gi|323337344|gb|EGA78597.1| Dcd1p [Saccharomyces cerevisiae Vin13]
 gi|323354690|gb|EGA86525.1| Dcd1p [Saccharomyces cerevisiae VL3]
          Length = 312

 Score = 60.7 bits (147), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 24/120 (20%), Positives = 34/120 (28%), Gaps = 29/120 (24%)

Query: 4   GNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGN------------------- 42
            + FM  A   A  +    R    VG V V   ++I+   N                   
Sbjct: 164 DSYFMKLATLAASRSNCMKRR---VGCVIVRECRVIATGYNGTPRHLTNCFNGGCPRCND 220

Query: 43  --RNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
                    +  HAE  A+    R    +      LY    PC  C+  I    I  + Y
Sbjct: 221 GDSRNLHTCLCLHAEENALLEAGRDRVGQN---ATLYCDTCPCLTCSVKIVQTGISEVVY 277


>gi|50285951|ref|XP_445404.1| hypothetical protein [Candida glabrata CBS 138]
 gi|49524708|emb|CAG58310.1| unnamed protein product [Candida glabrata]
          Length = 584

 Score = 60.7 bits (147), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 34/151 (22%), Positives = 57/151 (37%), Gaps = 26/151 (17%)

Query: 6   VFMSCALEEA------QNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
            +M  A+EEA      + A       VGAV V   +++S   +R         HAE  A+
Sbjct: 437 KYMVQAIEEADKCGPTKTAFS-----VGAVLVNGTEVLSVGHSRELPGN---THAEQCAL 488

Query: 60  RMGCRILSQEIL-PEVDLYVTLEPC-------TMCAAAISL--ARIRRLYYGASNPKGGG 109
                  + + + P   ++ T+EPC         C   I      I  ++ G   P    
Sbjct: 489 EKYFETHNTDKVPPGTVIFTTMEPCSFRLSGNLPCLQRIMAQDGNISTVFVGVMEPDT-F 547

Query: 110 IENGTQFYTLATCHHSPEIYPGISEQRSRQI 140
           ++N T    L   + +    PG  E++ + I
Sbjct: 548 VKNNTSLTDLENNNINYIQIPGY-EEQCKII 577


>gi|62327216|ref|YP_223954.1| deoxycytidylate deaminase [Phage phiJL001]
 gi|50059534|gb|AAT69506.1| deoxycytidylate deaminase [Phage phiJL001]
          Length = 244

 Score = 60.7 bits (147), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 28/97 (28%), Positives = 38/97 (39%), Gaps = 21/97 (21%)

Query: 26  VGAVAVL-NNKIISRAGN--------RNRELKD-VTA-----HAEILAIRMGCRILSQEI 70
           VGAV V  +N+++    N            L+D  T      HAE  AI           
Sbjct: 129 VGAVVVSEDNRVVGMGYNGFPVGVEDSRERLEDRPTKYMYVVHAEPNAILTAGLQA---- 184

Query: 71  LPEVDLYVTLEPCTMCAAAISLARIRRLY-YGASNPK 106
                LY TL PC  CA  I  + IRR+  + + N +
Sbjct: 185 -KGGTLYCTLFPCNECAKLIIQSGIRRVVSWASDNQR 220


>gi|325294911|ref|YP_004281425.1| CMP/dCMP deaminase zinc-binding protein [Desulfurobacterium
           thermolithotrophum DSM 11699]
 gi|325065359|gb|ADY73366.1| CMP/dCMP deaminase zinc-binding protein [Desulfurobacterium
           thermolithotrophum DSM 11699]
          Length = 151

 Score = 60.7 bits (147), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 28/126 (22%), Positives = 42/126 (33%), Gaps = 28/126 (22%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGN--------------RNRELKD 49
              FMS A   +  +       VGAV V + +II+   N                 +L  
Sbjct: 7   DEYFMSIAEMVSTRSTCIRRK-VGAVLVKDKRIIATGYNGPPSGLKHPEEVGCLREKLNI 65

Query: 50  VTA---------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
            +          HAE  AI      L         LY T  PC++C   +  A + ++ Y
Sbjct: 66  PSGERHELCRGLHAEQNAIIQAA--LHGVFTKGSILYCTHCPCSLCTKMLINAGVVKVIY 123

Query: 101 --GASN 104
             G  +
Sbjct: 124 KEGYPD 129


>gi|46109124|ref|XP_381620.1| hypothetical protein FG01444.1 [Gibberella zeae PH-1]
          Length = 428

 Score = 60.7 bits (147), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 30/171 (17%), Positives = 54/171 (31%), Gaps = 56/171 (32%)

Query: 1   MKKGN-VFMSCALEEAQNAALRN-EIPVGAVAV-LNN---KIISRAGNRN--------RE 46
           +K  + V+M+ A   A  A        +GAV V  +    +++  AG+            
Sbjct: 216 IKDDSSVWMALAHRVALQAKETGIGEAIGAVIVQRDGGKVELVGVAGDARWHQECGPLGG 275

Query: 47  LKDVTAHAEILAI------------RMGCRILSQEILP---------------------- 72
             +   H  + AI            R      +   L                       
Sbjct: 276 TSNPMTHCVVRAISMVAQKLVRHERRAAGLPFNPPNLDYDAFQDGPLLEIEKKCFVQEHP 335

Query: 73  --------EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
                    ++LYVT EPC  C+  I  +R+ +  +    P+ GG+ +  +
Sbjct: 336 NKDGYLCHGLELYVTHEPCVSCSMGILHSRMGKAVFATHMPRSGGLSSDDR 386


>gi|89056237|ref|YP_511688.1| CMP/dCMP deaminase, zinc-binding [Jannaschia sp. CCS1]
 gi|88865786|gb|ABD56663.1| CMP/dCMP deaminase zinc-binding protein [Jannaschia sp. CCS1]
          Length = 150

 Score = 60.7 bits (147), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 25/92 (27%), Positives = 31/92 (33%), Gaps = 20/92 (21%)

Query: 26  VGAVAV--LNNKIISRAGN---RNRELKDVTA-------------HAEILAIRMGCRILS 67
           VG V V    N++ +   N   R     +                HAE  AI    RI  
Sbjct: 29  VGCVIVGPQGNEVRATGYNGLPRGVSDTNEARFDRASGEKFFWGEHAERNAIYNAARIGV 88

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLY 99
              L    +YV   PC  CA AI    I R+ 
Sbjct: 89  S--LQGCTIYVNRFPCADCARAIIQCGIERVV 118


>gi|328785680|ref|XP_392413.3| PREDICTED: deoxycytidylate deaminase-like isoform 1 [Apis
           mellifera]
          Length = 189

 Score = 60.7 bits (147), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 28/123 (22%), Positives = 43/123 (34%), Gaps = 31/123 (25%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNK-IISRAGNR------------N 44
           +   + FM+ A   A+ +      P   VGA  V  +K I+    N              
Sbjct: 26  IDWEDYFMAIAFLSAKRSKD----PRTQVGACIVNEDKQIVGIGYNGMPKGCSDDEFSWC 81

Query: 45  RELKDVT-------AHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRR 97
           +   D          HAE+ AI       +   +    +YV L PC  CA  I  + I+ 
Sbjct: 82  KNSNDSLKNKSLYVCHAEVNAILN----KNCSSVKNCTIYVALFPCNECAKVIIQSGIKL 137

Query: 98  LYY 100
           + Y
Sbjct: 138 VKY 140


>gi|259146902|emb|CAY80158.1| Dcd1p [Saccharomyces cerevisiae EC1118]
          Length = 312

 Score = 60.7 bits (147), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 24/120 (20%), Positives = 34/120 (28%), Gaps = 29/120 (24%)

Query: 4   GNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGN------------------- 42
            + FM  A   A  +    R    VG V V   ++I+   N                   
Sbjct: 164 DSYFMKLATLAASRSNCMKRR---VGCVIVRECRVIATGYNGTPRHLTNCFNGGCPRCND 220

Query: 43  --RNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
                    +  HAE  A+    R    +      LY    PC  C+  I    I  + Y
Sbjct: 221 GDSRNLHTCLCLHAEENALLEAGRDRVGQN---ATLYCDTCPCLTCSVKIVQTGISEVVY 277


>gi|207344561|gb|EDZ71669.1| YHR144Cp-like protein [Saccharomyces cerevisiae AWRI1631]
          Length = 288

 Score = 60.7 bits (147), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 24/120 (20%), Positives = 34/120 (28%), Gaps = 29/120 (24%)

Query: 4   GNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGN------------------- 42
            + FM  A   A  +    R    VG V V   ++I+   N                   
Sbjct: 164 DSYFMKLATLAASRSNCMKRR---VGCVIVRECRVIATGYNGTPRHLTNCFNGGCPRCND 220

Query: 43  --RNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
                    +  HAE  A+    R    +      LY    PC  C+  I    I  + Y
Sbjct: 221 GDSRNLHTCLCLHAEENALLEAGRDRVGQN---ATLYCDTCPCLTCSVKIVQTGISEVVY 277


>gi|253581046|ref|ZP_04858307.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
 gi|251847709|gb|EES75678.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
          Length = 163

 Score = 60.7 bits (147), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 32/122 (26%), Positives = 42/122 (34%), Gaps = 24/122 (19%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGN-------------RNRE 46
           +     FM  A+     +   N   VGA  V  +NKI+S   N                 
Sbjct: 11  LSWDEYFMGVAMMSGMRSKDPNSQ-VGACIVSEDNKILSMGYNGFPKGCSDDEFPWAREG 69

Query: 47  LKDVT-----AHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
               T      H+E+ AI           L    LYV+L PC  CA AI  A I+ + Y 
Sbjct: 70  DSLHTKYFYVTHSELNAILN----YRGGSLEGAKLYVSLFPCNECAKAIIQAGIKTIVYD 125

Query: 102 AS 103
             
Sbjct: 126 CD 127


>gi|237651485|ref|YP_002898956.1| putative deoxycytidylate deaminase [Roseophage EE36P1]
 gi|220898117|gb|ACL81374.1| hypothetical protein [Sulfitobacter phage EE36phi1]
          Length = 142

 Score = 60.7 bits (147), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 31/113 (27%), Positives = 44/113 (38%), Gaps = 23/113 (20%)

Query: 11  ALEEAQNAALRNEIP---VGAVAVLNNKIISR-AGN---RNRELK-----------DVTA 52
           AL  A+  + R+  P   VGAV +  +K I+    N   R  E K               
Sbjct: 9   ALGLAEAVSKRSRDPSTKVGAVIIRPDKTIASMGYNGFPRTMEDKEEWWSDRPQKYSRVI 68

Query: 53  HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNP 105
           H E+ A+        +E +  + LY T   C  CA  I  A I R+ +G S  
Sbjct: 69  HGEMNALLNA-----KEPVLAMTLYCTHPCCEHCAKHIIAAGISRVVFGTSEE 116


>gi|6321938|ref|NP_012014.1| Dcd1p [Saccharomyces cerevisiae S288c]
 gi|729306|sp|P06773|DCTD_YEAST RecName: Full=Deoxycytidylate deaminase; AltName: Full=dCMP
           deaminase
 gi|500658|gb|AAB68985.1| Dcd1p: dCMP deaminase [Saccharomyces cerevisiae]
 gi|151944091|gb|EDN62384.1| dCMP deaminase [Saccharomyces cerevisiae YJM789]
 gi|285810051|tpg|DAA06838.1| TPA: Dcd1p [Saccharomyces cerevisiae S288c]
          Length = 312

 Score = 60.7 bits (147), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 24/120 (20%), Positives = 34/120 (28%), Gaps = 29/120 (24%)

Query: 4   GNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGN------------------- 42
            + FM  A   A  +    R    VG V V   ++I+   N                   
Sbjct: 164 DSYFMKLATLAASRSNCMKRR---VGCVIVRECRVIATGYNGTPRHLTNCFNGGCPRCND 220

Query: 43  --RNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
                    +  HAE  A+    R    +      LY    PC  C+  I    I  + Y
Sbjct: 221 GDSRNLHTCLCLHAEENALLEAGRDRVGQN---ATLYCDTCPCLTCSVKIVQTGISEVVY 277


>gi|323348302|gb|EGA82551.1| Dcd1p [Saccharomyces cerevisiae Lalvin QA23]
          Length = 272

 Score = 60.7 bits (147), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 24/120 (20%), Positives = 34/120 (28%), Gaps = 29/120 (24%)

Query: 4   GNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGN------------------- 42
            + FM  A   A  +    R    VG V V   ++I+   N                   
Sbjct: 124 DSYFMKLATLAASRSNCMKRR---VGCVIVRECRVIATGYNGTPRHLTNCFNGGCPRCND 180

Query: 43  --RNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
                    +  HAE  A+    R    +      LY    PC  C+  I    I  + Y
Sbjct: 181 GDSRNLHTCLCLHAEENALLEAGRDRVGQN---ATLYCDTCPCLTCSVKIVQTGISEVVY 237


>gi|157952575|ref|YP_001497467.1| hypothetical protein NY2A_B271R [Paramecium bursaria Chlorella
           virus NY2A]
 gi|155122802|gb|ABT14670.1| hypothetical protein NY2A_B271R [Paramecium bursaria Chlorella
           virus NY2A]
          Length = 145

 Score = 60.7 bits (147), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 29/112 (25%), Positives = 41/112 (36%), Gaps = 28/112 (25%)

Query: 8   MSCALEEAQNAALRNEIPV--GAVAVLNNKIISRAGNRNREL-KDVTAHAEILAIRMGCR 64
           +  A+E A   A R+  P   G V +   KII+   N  R      + HAE+ A+     
Sbjct: 29  LDEAIESAIEQANRSSGPFKHGCVIMSGKKIIATGNNHTRRDIGTFSIHAEMDAL----- 83

Query: 65  ILSQEILPEVDLY----------------VTLEPCTMCAAAISLARIRRLYY 100
                 + + DLY                    PC MC AA+    IR + Y
Sbjct: 84  ----WRISDSDLYDNMKAVIIRVTNTGKLANSRPCEMCMAALKQHNIRTIVY 131


>gi|317051269|ref|YP_004112385.1| CMP/dCMP deaminase zinc-binding protein [Desulfurispirillum indicum
           S5]
 gi|316946353|gb|ADU65829.1| CMP/dCMP deaminase zinc-binding protein [Desulfurispirillum indicum
           S5]
          Length = 154

 Score = 60.7 bits (147), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 28/128 (21%), Positives = 45/128 (35%), Gaps = 29/128 (22%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGN---------------RNRELK 48
              FM+   E  + ++      +GA+ V   +II+   N                  E  
Sbjct: 10  DQYFMNITAEVGRRSSCLR-RQIGAIIVREKRIIATGYNGAPPGVRSSMEIGSCLRDERN 68

Query: 49  DVTA---------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL- 98
             +          HAE  AI    R  +   +    LY T +PC++CA  I  A IR + 
Sbjct: 69  IPSGTQHEICRGLHAEQNAILQAARFGTS--VEGATLYCTHQPCSICAKIIIGAGIREVK 126

Query: 99  -YYGASNP 105
             +G  + 
Sbjct: 127 YVHGYPDE 134


>gi|146276894|ref|YP_001167053.1| riboflavin biosynthesis protein RibD [Rhodobacter sphaeroides ATCC
           17025]
 gi|145555135|gb|ABP69748.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase /
           diaminohydroxyphosphoribosylaminopyrimidine deaminase
           [Rhodobacter sphaeroides ATCC 17025]
          Length = 356

 Score = 60.7 bits (147), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 33/148 (22%), Positives = 47/148 (31%), Gaps = 21/148 (14%)

Query: 8   MSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M+ AL        R      VG V V   +++ R   R         HAE +        
Sbjct: 1   MAHALRLGARGLGRTWPNPAVGCVIVKAGRVVGRGWTRPGGR----PHAEPV-----ALA 51

Query: 66  LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
            +         YVTLEPC        CA A++ A + R+     +P       G      
Sbjct: 52  EAGAAALGATAYVTLEPCAHHGRTPPCAEALAAAGVARVVTATGDPDPRVAGRGHALLHA 111

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKE 147
           A       +  G+ E  +R     F K 
Sbjct: 112 AG----IAVTEGVLEAEARAANAGFLKR 135


>gi|301090647|ref|XP_002895529.1| deoxycytidylate deaminase [Phytophthora infestans T30-4]
 gi|262097843|gb|EEY55895.1| deoxycytidylate deaminase [Phytophthora infestans T30-4]
          Length = 122

 Score = 60.3 bits (146), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 19/75 (25%), Positives = 28/75 (37%), Gaps = 4/75 (5%)

Query: 53  HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN 112
           HAE+ AI       +   +    +YV L PC  CA  I  + I R+ Y + N K      
Sbjct: 40  HAEMNAILN----KNSTDVKGCSIYVALFPCNECAKLIIQSGIARVVYYSDNWKFVASRR 95

Query: 113 GTQFYTLATCHHSPE 127
                 +    H  +
Sbjct: 96  LLDMAGVQYTQHKLQ 110


>gi|227872739|ref|ZP_03991063.1| hypothetical protein HMPREF6123_1002 [Oribacterium sinus F0268]
 gi|227841417|gb|EEJ51723.1| hypothetical protein HMPREF6123_1002 [Oribacterium sinus F0268]
          Length = 58

 Score = 60.3 bits (146), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 12/52 (23%), Positives = 21/52 (40%)

Query: 98  LYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
           L +   NPK G   +      +   +H   I   + E  +R+++  FF   R
Sbjct: 1   LVFSLRNPKAGFCGSLLNVLQMKELNHRVVIRENVLEGEARELLSHFFSSMR 52


>gi|171384|gb|AAA34561.1| dCMP deaminase [Saccharomyces cerevisiae]
          Length = 312

 Score = 60.3 bits (146), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 24/120 (20%), Positives = 34/120 (28%), Gaps = 29/120 (24%)

Query: 4   GNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGN------------------- 42
            + FM  A   A  +    R    VG V V   ++I+   N                   
Sbjct: 164 DSYFMKLATLAASRSNCMKRR---VGCVIVRECRVIATGYNGTPRHLTNCFNGGCPRCND 220

Query: 43  --RNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
                    +  HAE  A+    R    +      LY    PC  C+  I    I  + Y
Sbjct: 221 GDSRNLHTCLCLHAEENALLEAGRDRVGQN---ATLYCDTCPCLTCSVKIVQTGISEVVY 277


>gi|325679436|ref|ZP_08159020.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Ruminococcus albus 8]
 gi|324108864|gb|EGC03096.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Ruminococcus albus 8]
          Length = 159

 Score = 60.3 bits (146), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 31/125 (24%), Positives = 49/125 (39%), Gaps = 31/125 (24%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLN-NKIISRAGNR----NRELKDV-- 50
           +   + F+  A    + +A R++ P   VGA  V   NKI+S   N       + +    
Sbjct: 8   ISWDDYFLGIA----ELSAARSKDPNTQVGACIVSEENKILSVGYNGMPAGCNDDEMPWG 63

Query: 51  ------------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98
                         HAE+ A+     + S   L    +YV+L PC  CA AI  + I+ +
Sbjct: 64  RKGDFLDTKYPFVCHAELNAV-----LNSNHDLKGSRIYVSLFPCNECAKAIIQSGIKEV 118

Query: 99  YYGAS 103
            Y   
Sbjct: 119 IYTCD 123


>gi|193216732|ref|YP_001999974.1| deoxycytidylate deaminase [Mycoplasma arthritidis 158L3-1]
 gi|193002055|gb|ACF07270.1| deoxycytidylate deaminase [Mycoplasma arthritidis 158L3-1]
          Length = 173

 Score = 60.3 bits (146), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 37/132 (28%), Positives = 51/132 (38%), Gaps = 36/132 (27%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVL-NNKIISRAGN-------------- 42
           +     FMS     A+ +A+R++ P   VGA  V   N I+S   N              
Sbjct: 9   IDWDKYFMS----LAKLSAMRSKDPSTKVGACIVNTKNYIVSLGYNGMPTSFNNTKINND 64

Query: 43  ------RNRELKDVTA-------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAA 89
                 R     D+         HAE  AI     I S  I P   LYVT  PC MCA  
Sbjct: 65  TQFPWDRPSNKDDIINSKYTYVVHAEQNAIINA-NITSSHIEPGSTLYVTHSPCAMCAKL 123

Query: 90  ISLARIRRLYYG 101
           +  ++I+++ Y 
Sbjct: 124 VVQSKIKKVVYA 135


>gi|220925141|ref|YP_002500443.1| riboflavin biosynthesis protein RibD [Methylobacterium nodulans ORS
           2060]
 gi|219949748|gb|ACL60140.1| riboflavin biosynthesis protein RibD [Methylobacterium nodulans ORS
           2060]
          Length = 388

 Score = 60.3 bits (146), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 34/150 (22%), Positives = 52/150 (34%), Gaps = 29/150 (19%)

Query: 4   GNVFMSCALEEAQNAALRNEI---P-VGAVAVLN----NKIISRAGNRNRELKDVTAHAE 55
              +M  AL   +      E    P VGAV V       +I+++   +         HAE
Sbjct: 12  DRRYMRLALALGRRHL--GETWPNPSVGAVLVAGPPGAERILAQGVTQPGGR----PHAE 65

Query: 56  ILAIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGG 109
            +         + E      LYVTLEPC+       CA A+  A I R+    ++P    
Sbjct: 66  RI-----ALAAAGEAARGATLYVTLEPCSHHGRTSPCADAVVEAGIARVVSAMADPDPRV 120

Query: 110 IENGTQFYTLATCHHSPEIYPGISEQRSRQ 139
              G    + A       +  G   Q + +
Sbjct: 121 AGRGHGRLSAAG----IAVTVGTLGQEAAR 146


>gi|254445886|ref|ZP_05059362.1| riboflavin biosynthesis protein RibD [Verrucomicrobiae bacterium
           DG1235]
 gi|198260194|gb|EDY84502.1| riboflavin biosynthesis protein RibD [Verrucomicrobiae bacterium
           DG1235]
          Length = 377

 Score = 60.3 bits (146), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 31/153 (20%), Positives = 52/153 (33%), Gaps = 24/153 (15%)

Query: 8   MSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           M  ALEEA+        P   +GA  V   ++++ +     E    TA  E+       R
Sbjct: 1   MKVALEEARKGWGCT-HPQPMIGAALVEAGQVVATSY---IEQPGSTA-PEVRLFERLGR 55

Query: 65  ILSQEILPEVDLYVTLEPCTMC------AAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
                      L++TLEP            AI  + +  +  GAS+P       G     
Sbjct: 56  KPK----EGASLFLTLEPGPSSNRLESGVRAIIDSGVSYVVIGASDPMPEHANKGADALK 111

Query: 119 LATCHHSPEIYPGISEQRSRQI--IQDFFKERR 149
                   ++   I  +    +  I +F+ + R
Sbjct: 112 EGG----VKVERRILIEDCEDLNIISNFWVQNR 140


>gi|254585289|ref|XP_002498212.1| ZYRO0G04972p [Zygosaccharomyces rouxii]
 gi|238941106|emb|CAR29279.1| ZYRO0G04972p [Zygosaccharomyces rouxii]
          Length = 358

 Score = 60.3 bits (146), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 27/120 (22%), Positives = 35/120 (29%), Gaps = 29/120 (24%)

Query: 4   GNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGNRN-RELKDV---------- 50
              FM  A   A  +    R    VG V V   ++I+   N   R L +           
Sbjct: 210 DTYFMKLATLAASRSNCMKRK---VGCVIVRERRVIATGYNGTPRHLTNCFNGGCPRCND 266

Query: 51  ----------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
                       HAE  A+    R     I     LY    PC  C+  I    I  + Y
Sbjct: 267 GDSQNLHTCLCLHAEENALLEAGR---DRIGAHATLYCDTCPCLTCSVKIVQTGITEVVY 323


>gi|226366358|ref|YP_002784141.1| diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Rhodococcus opacus B4]
 gi|226244848|dbj|BAH55196.1| diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Rhodococcus opacus B4]
          Length = 354

 Score = 60.3 bits (146), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 27/137 (19%), Positives = 45/137 (32%), Gaps = 23/137 (16%)

Query: 8   MSCALEEAQNA--ALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           M  A+  A++A         VGAV +    +I      +         HAE++A+R    
Sbjct: 18  MQIAIGAAESARGFTSPNPAVGAVVLDAAGRIAGVGMTQPPGG----PHAEVVALREAGD 73

Query: 65  ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
                        VTLEPC        C+ A+  A +  ++Y   +P            +
Sbjct: 74  AA-----RGGTAVVTLEPCNHHGRTGPCSQALLDAGVVAVHYAVGDPNPEAAGGAEALVS 128

Query: 119 LATCHHSPEIYPGISEQ 135
                   E+  G+   
Sbjct: 129 A-----GVEVTSGLRAD 140


>gi|296114200|ref|ZP_06832855.1| riboflavin biosynthesis protein RibD [Gluconacetobacter hansenii
           ATCC 23769]
 gi|295979276|gb|EFG85999.1| riboflavin biosynthesis protein RibD [Gluconacetobacter hansenii
           ATCC 23769]
          Length = 357

 Score = 60.3 bits (146), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 29/105 (27%), Positives = 38/105 (36%), Gaps = 13/105 (12%)

Query: 25  PVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83
           PVG   +     I+    +        T HAE  AI   CR           + VTLEPC
Sbjct: 42  PVGCAILDAAGTILCTGAHHRA----GTPHAEARAI-ALCRERGLIE-RAHTIVVTLEPC 95

Query: 84  TM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
                   C+ AI    IR ++ GA++P       G  F     C
Sbjct: 96  NHTGRTGPCSQAIMHTPIRTVWIGATDPNPNVAGGGADFLRDHGC 140


>gi|170085575|ref|XP_001874011.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164651563|gb|EDR15803.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 286

 Score = 60.3 bits (146), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 26/121 (21%), Positives = 38/121 (31%), Gaps = 28/121 (23%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRN-RELKDV------------ 50
              FM+ A   A   +   +  VGAV V  N++++   N   R LK+             
Sbjct: 129 DAYFMTLA-SLASRRSNCMKRRVGAVLVRENRVLATGYNGTPRGLKNCNEGGCPQCNGRV 187

Query: 51  -----------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLY 99
                        HAE  A+    R           LY    PC  C   I    ++ + 
Sbjct: 188 LPSPSHSYECVCLHAEENALLEAGRERVG---TNAVLYCNTCPCLRCTVKIIQTGVKTVV 244

Query: 100 Y 100
           Y
Sbjct: 245 Y 245


>gi|149197544|ref|ZP_01874595.1| hypothetical protein LNTAR_01145 [Lentisphaera araneosa HTCC2155]
 gi|149139562|gb|EDM27964.1| hypothetical protein LNTAR_01145 [Lentisphaera araneosa HTCC2155]
          Length = 151

 Score = 60.3 bits (146), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 26/120 (21%), Positives = 41/120 (34%), Gaps = 26/120 (21%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRN-RELKDV------------ 50
              FM+ A   A+ ++      V AV V + ++IS   N   R +K+             
Sbjct: 10  DQYFMNIAHVAAERSSCSRRH-VAAVIVKDKRVISTGYNGTPRGVKNCDDGGCPRCNSDV 68

Query: 51  ----------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
                       HAE  +I           +    +Y T  PC +CA  I  A I  + +
Sbjct: 69  ASGHGLDECLCCHAEENSIVQAA--CHGISINGASIYTTYSPCLLCAKMIINAGIHEVIF 126


>gi|316979440|gb|EFV62236.1| putative deoxycytidylate deaminase [Trichinella spiralis]
          Length = 165

 Score = 60.3 bits (146), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 31/123 (25%), Positives = 42/123 (34%), Gaps = 31/123 (25%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPV---GAVAV-LNNKIISRAGN-------------- 42
           +   + FM  A   ++ +      PV   GA     ++ IIS   N              
Sbjct: 3   LDTESFFMGIACLSSKRSKD----PVTQVGACIANSSDVIISTGYNGMPVGCDDNVLPWG 58

Query: 43  ----RNRELKDV-TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRR 97
                  E K     HAE+ A            L    LYVTL PC MCA  I  + I+ 
Sbjct: 59  KSLPNPLETKHPFVCHAELNAFLNAS----TSELSGCRLYVTLFPCNMCAKLIISSGIKE 114

Query: 98  LYY 100
           + Y
Sbjct: 115 IIY 117


>gi|120437804|ref|YP_863490.1| cytidine/deoxycytidylate deaminase family protein [Gramella
           forsetii KT0803]
 gi|117579954|emb|CAL68423.1| cytidine/deoxycytidylate deaminase family protein [Gramella
           forsetii KT0803]
          Length = 143

 Score = 60.3 bits (146), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 28/117 (23%), Positives = 44/117 (37%), Gaps = 25/117 (21%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTA-------- 52
           +K    ++  A E ++ +    +  VGA+ V +  IIS   N        T         
Sbjct: 7   LKFDKAYLRIAREWSKLSHCNRKQ-VGALIVKDRMIISDGYNGT-----PTGFENFCEDE 60

Query: 53  ---------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
                    HAE  AI       S +   +  LY+T+ PC  C+  I  + I RL +
Sbjct: 61  EGYTKWYVLHAEANAILKVA--GSTQSCKDATLYITMSPCKECSKLIHQSGISRLVF 115


>gi|293364019|ref|ZP_06610755.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Mycoplasma alligatoris A21JP2]
 gi|292552509|gb|EFF41283.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Mycoplasma alligatoris A21JP2]
          Length = 158

 Score = 60.3 bits (146), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 28/128 (21%), Positives = 45/128 (35%), Gaps = 33/128 (25%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNK-IISRAGNRNRELKDV------ 50
           +     F    +  A+ +ALR++ P   VGA  + + K +I    N      D+      
Sbjct: 5   INWDTYF----ISLAKISALRSKDPSTQVGACIINDEKKVIGLGYNGMPNGNDIDFPWGR 60

Query: 51  ------------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98
                         HAE+ AI                +Y TL PC  CA  I  + I+ +
Sbjct: 61  DSKIAKETKYPYVVHAEVNAILNAIVQP-----KGAIIYTTLYPCINCAKVIVQSGIKEV 115

Query: 99  YYGASNPK 106
            +   + K
Sbjct: 116 VF--EDDK 121


>gi|332297977|ref|YP_004439899.1| CMP/dCMP deaminase zinc-binding protein [Treponema brennaborense
           DSM 12168]
 gi|332181080|gb|AEE16768.1| CMP/dCMP deaminase zinc-binding protein [Treponema brennaborense
           DSM 12168]
          Length = 166

 Score = 60.3 bits (146), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 24/120 (20%), Positives = 34/120 (28%), Gaps = 27/120 (22%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAG---------------------- 41
            + FM      A+ A        G V   +N+I+                          
Sbjct: 15  DDYFMEICRTVAKRATCDRGR-SGCVIARDNRILVTGYVGSPAGLPHCDDVGHLLKKMVH 73

Query: 42  -NRNRELKDV-TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLY 99
            N       V T HAE  AI    +      +    LY  + PC  C   I    I+R+ 
Sbjct: 74  ENGTVTQHCVRTVHAEQNAICQAAKNGIS--IDGATLYCKMTPCRTCTMLIINCGIKRVV 131


>gi|169629892|ref|YP_001703541.1| bifunctional riboflavin biosynthesis protein RibG [Mycobacterium
           abscessus ATCC 19977]
 gi|169241859|emb|CAM62887.1| Probable bifunctional riboflavin biosynthesis protein RibG
           [Mycobacterium abscessus]
          Length = 340

 Score = 60.3 bits (146), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 33/156 (21%), Positives = 59/156 (37%), Gaps = 28/156 (17%)

Query: 8   MSCALEEAQNAALR--N----EIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIR 60
           +  A++ A  AA           PVGAV +    ++    G R    +    HAE++   
Sbjct: 7   LDEAMDLAIRAAEEVKGSTYPNPPVGAVILDAAGQVAGVGGTRPPGQE----HAEVV--- 59

Query: 61  MGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGT 114
                 +          VTLEPC        C  A++ A + R+ Y  ++P         
Sbjct: 60  --ALAGAGAAARGGTAVVTLEPCNHQGRTGPCVDALAAAGVSRVVYAVADPNPQAAGGAA 117

Query: 115 QFYTLATCHHSPEIYPGISEQR-SRQIIQDFFKERR 149
           +  TL       E+  G++  R S   ++++  ++R
Sbjct: 118 RLRTL-----GIEVLDGLASDRVSAGPLREWLHKQR 148


>gi|326427835|gb|EGD73405.1| hypothetical protein PTSG_05101 [Salpingoeca sp. ATCC 50818]
          Length = 390

 Score = 60.3 bits (146), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 15/66 (22%), Positives = 34/66 (51%), Gaps = 1/66 (1%)

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLAT 121
             ++ S  +L  +D+++T EPC MC+ A+  +R+ R+++  +    G I    + +    
Sbjct: 319 AGQLESSYLLKGLDVFLTHEPCIMCSMALVHSRVGRIFFETTCAD-GAISTNHEIHQHDN 377

Query: 122 CHHSPE 127
            +H  +
Sbjct: 378 LNHRFD 383


>gi|94265530|ref|ZP_01289278.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [delta
           proteobacterium MLMS-1]
 gi|93453971|gb|EAT04317.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [delta
           proteobacterium MLMS-1]
          Length = 151

 Score = 60.3 bits (146), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 30/126 (23%), Positives = 44/126 (34%), Gaps = 28/126 (22%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGN--------------RNRELKD 49
              FM+     AQ A       VGAV V   +I++   N                ++   
Sbjct: 11  DEYFMAITDLVAQRATCLR-RQVGAVLVRERRIVATGYNGAPSNIRHCLEVGCLRQQQGV 69

Query: 50  VTA---------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
            +          HAE  AI      L    L    LY T  PC++C+  +  A + R+YY
Sbjct: 70  PSGERHELCRGLHAEQNAIIQAA--LHGVSLQGSVLYCTNMPCSICSKMLINAAVTRIYY 127

Query: 101 --GASN 104
             G  +
Sbjct: 128 RDGYPD 133


>gi|167828089|ref|ZP_02459560.1| riboflavin biosynthesis protein RibD [Burkholderia pseudomallei
          9]
          Length = 97

 Score = 60.3 bits (146), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 25/98 (25%), Positives = 33/98 (33%), Gaps = 17/98 (17%)

Query: 4  GNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
              M+ AL  A+           VG V     + +    +R         HAE+ A+R 
Sbjct: 8  DRTHMAHALRLAEQGLYTTHPNPRVGCVIARGARTLGAGWHRRAGE----PHAEVHALRE 63

Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAISLA 93
                 E       YVTLEPC        CA A+  A
Sbjct: 64 AG-----ERARGATAYVTLEPCAHFGRTPPCANALVAA 96


>gi|325849001|ref|ZP_08170511.1| putative ComE operon protein 2 [Anaerococcus hydrogenalis
           ACS-025-V-Sch4]
 gi|325480645|gb|EGC83707.1| putative ComE operon protein 2 [Anaerococcus hydrogenalis
           ACS-025-V-Sch4]
          Length = 146

 Score = 60.3 bits (146), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 25/91 (27%), Positives = 38/91 (41%), Gaps = 18/91 (19%)

Query: 26  VGAVAVLN-NKIISRAGNRNR-----------ELKD----VTAHAEILAIRMGCRILSQE 69
           VG V V N N+IIS   N +             ++D     T HAE+ A+    +     
Sbjct: 30  VGCVLVNNENRIISTGYNGSIKGNPHCDEVGHTMRDGHCIATIHAEMNALLYCAKEGIS- 88

Query: 70  ILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
            +     YVT  PC  C  ++  A ++ +YY
Sbjct: 89  -VKNSICYVTHFPCLNCTKSLIQAGVKEIYY 118


>gi|255034861|ref|YP_003085482.1| CMP/dCMP deaminase zinc-binding [Dyadobacter fermentans DSM 18053]
 gi|254947617|gb|ACT92317.1| CMP/dCMP deaminase zinc-binding [Dyadobacter fermentans DSM 18053]
          Length = 164

 Score = 60.3 bits (146), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 32/164 (19%), Positives = 55/164 (33%), Gaps = 51/164 (31%)

Query: 4   GNVFMSCALEEAQNAA---LRNEIPVGAVAVLNNKIISRAGNRN-RELKDV--------- 50
            +++M  A   A+ +     +    VGAV   + +IIS   N       +          
Sbjct: 13  DDIYMDLAKNLAKRSHCIKAQ----VGAVLTKDTRIISIGYNGPPAGTHNCDEEFPGVGC 68

Query: 51  ----------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
                       HAE  AI     + +   +    L+VTL PC  CA  I   +I+++ +
Sbjct: 69  PRDAKGSCSLALHAEQNAILFA--VKNGSNIEGSTLFVTLAPCIACARVIYTMKIKKVIF 126

Query: 101 GASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
                                  HS   Y GI+ +   + ++ F
Sbjct: 127 ----------------------LHSYAAYKGIAVEEGVEFLRRF 148


>gi|317484775|ref|ZP_07943674.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Bilophila wadsworthia 3_1_6]
 gi|316923982|gb|EFV45169.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Bilophila wadsworthia 3_1_6]
          Length = 165

 Score = 60.3 bits (146), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 26/125 (20%), Positives = 47/125 (37%), Gaps = 26/125 (20%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGN--------------RNRELKDV 50
           + FM+ A   A+ +       VGAVAV + +I++   N                 +L   
Sbjct: 8   DYFMNIAHLVAERSTCLRRR-VGAVAVKDKRILATGYNGAPSKVAHCLDIGCLREQLGVP 66

Query: 51  TA---------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
           +          HAE   I      +    L   ++Y T +PC +C+  +    I +++Y 
Sbjct: 67  SGQRHEICRGLHAEQNVIIQAA--VHGISLAGAEVYCTHQPCLICSKMLINCGITKIWYA 124

Query: 102 ASNPK 106
           +  P 
Sbjct: 125 SGYPD 129


>gi|262182497|ref|ZP_06041918.1| riboflavin biosynthesis protein ribD [Corynebacterium aurimucosum
           ATCC 700975]
          Length = 342

 Score = 60.3 bits (146), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 30/128 (23%), Positives = 45/128 (35%), Gaps = 22/128 (17%)

Query: 2   KKGNVFMSCALEEAQNAAL--RN----EIPVGAVAVLN-NKIISRAGNRNRELKDVTAHA 54
           +  N  +  AL  A  A    R       PVGAV + +  +++     +         HA
Sbjct: 4   RNDNPVLMRALHVAMGAGEQVRGTTSPNPPVGAVILDSAGQVVGVGATQPPGG----PHA 59

Query: 55  EILAIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGG 108
           E++A+R                 VTLEPC        CA A+  A +  +YY   +P   
Sbjct: 60  EVMALRDAGDKA-----RGGTAVVTLEPCNHTGRTGPCAQALIDASVAAVYYLHPDPTPQ 114

Query: 109 GIENGTQF 116
                T  
Sbjct: 115 AGGGSTTL 122


>gi|297618439|ref|YP_003703598.1| CMP/dCMP deaminase zinc-binding protein [Syntrophothermus
           lipocalidus DSM 12680]
 gi|297146276|gb|ADI03033.1| CMP/dCMP deaminase zinc-binding protein [Syntrophothermus
           lipocalidus DSM 12680]
          Length = 153

 Score = 60.3 bits (146), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 25/119 (21%), Positives = 42/119 (35%), Gaps = 26/119 (21%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGN--------------RNRELKD 49
            + F+      A+ +       VGA+ V + +II+   N                 E   
Sbjct: 9   DDYFLELTQVVAKRSTCLRRH-VGALLVKDERIIATGYNGAPQGLRHCLEAGCLREEKGI 67

Query: 50  VTA---------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLY 99
            +          HAE  AI    R     +  +  LY T +PC +CA  +  A I+++ 
Sbjct: 68  PSGVRYELCRGVHAEQNAIINAARYGVSTL--DSVLYCTDQPCILCARMLINAGIKKVI 124


>gi|314121791|ref|YP_004063910.1| deoxycytidylate deaminase [Enterobacteria phage vB_EcoM-VR7]
 gi|313151548|gb|ADR32604.1| deoxycytidylate deaminase [Enterobacteria phage vB_EcoM-VR7]
          Length = 193

 Score = 60.3 bits (146), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 24/74 (32%), Positives = 37/74 (50%), Gaps = 4/74 (5%)

Query: 36  IISRAGNRNRE--LKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLA 93
           ++++A         K+   HAE+ AI    R+ S   +    +YVTL PC  CA AIS +
Sbjct: 85  VLAKAHREEHSAWSKNNEIHAELNAILFAARMGSS--IEGATMYVTLSPCPDCAKAISQS 142

Query: 94  RIRRLYYGASNPKG 107
            I++L Y  +  K 
Sbjct: 143 GIKKLVYCETYDKN 156


>gi|155370112|ref|YP_001425646.1| hypothetical protein FR483_N014L [Paramecium bursaria Chlorella
           virus FR483]
 gi|155123432|gb|ABT15299.1| hypothetical protein FR483_N014L [Paramecium bursaria Chlorella
           virus FR483]
          Length = 119

 Score = 59.9 bits (145), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 30/112 (26%), Positives = 44/112 (39%), Gaps = 28/112 (25%)

Query: 8   MSCALEEAQNAALRNEIPV--GAVAVLNNKIISRAGNRNREL-KDVTAHAEILAIRMGCR 64
           +  A++EA   ALR++ P       +   KII+R  N  R+     + HAEI AI     
Sbjct: 4   LHEAIDEAAKYALRSDGPFKHSCFIMSGKKIIARGNNHVRQQIGTSSVHAEIDAI----- 58

Query: 65  ILSQEILPEVDLYVTL----------------EPCTMCAAAISLARIRRLYY 100
                 +   DLY  L                 PC MC +A+    I+ + Y
Sbjct: 59  ----WRINNTDLYDNLKAIIIRSSPTGRLGNSRPCVMCMSALKQHGIKTIVY 106


>gi|302669645|ref|YP_003829605.1| deoxycytidylate deaminase [Butyrivibrio proteoclasticus B316]
 gi|302394118|gb|ADL33023.1| deoxycytidylate deaminase [Butyrivibrio proteoclasticus B316]
          Length = 170

 Score = 59.9 bits (145), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 33/123 (26%), Positives = 46/123 (37%), Gaps = 31/123 (25%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVL-NNKIISRAGN-------------- 42
           +     FM  A    + AA+R++ P   VG+  V  +N I+S   N              
Sbjct: 17  ISWDEYFMGVA----KLAAMRSKDPNTQVGSCIVSEDNNILSMGYNGFPKGCSDEEFPWE 72

Query: 43  ----RNRELKDV-TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRR 97
                    K     H+E+ AI           L    +YV+L PC  CA AI  A IR 
Sbjct: 73  RDGEDELGTKYPFVTHSELNAILN----YRGGSLVGAKIYVSLFPCNECAKAIIQAGIRT 128

Query: 98  LYY 100
           + Y
Sbjct: 129 VVY 131


>gi|254564943|ref|XP_002489582.1| DRAP deaminase, catalyzes the third step of the riboflavin
           biosynthesis pathway [Pichia pastoris GS115]
 gi|238029378|emb|CAY67301.1| DRAP deaminase, catalyzes the third step of the riboflavin
           biosynthesis pathway [Pichia pastoris GS115]
 gi|328350006|emb|CCA36406.1| DRAP deaminase [Pichia pastoris CBS 7435]
          Length = 547

 Score = 59.9 bits (145), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 33/133 (24%), Positives = 49/133 (36%), Gaps = 21/133 (15%)

Query: 4   GNVFMSCALEEAQNAALRNEIP--VGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIR 60
               M  A+EEA+      E    VG +    N +IISR  +R  E      HAE    +
Sbjct: 406 HREMMKLAIEEAKKC-DHTETAFNVGCIITDENGEIISRGYSREFEGN---THAE----Q 457

Query: 61  MGCRILSQEILPEVDLYVTLEPCT-------MCAAAISLAR--IRRLYYGASNP-KGGGI 110
                L  ++ P   LY T+EPC+        C   I   +  +  ++ G   P K    
Sbjct: 458 CALMKLDYKLPPGSILYTTMEPCSERLSGNKPCVNRIIDLKGEVITVFVGVVEPKKFIAD 517

Query: 111 ENGTQFYTLATCH 123
             G +    A  +
Sbjct: 518 NTGKRQLEDAGVN 530


>gi|195348175|ref|XP_002040626.1| GM22266 [Drosophila sechellia]
 gi|194122136|gb|EDW44179.1| GM22266 [Drosophila sechellia]
          Length = 191

 Score = 59.9 bits (145), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 35/155 (22%), Positives = 50/155 (32%), Gaps = 40/155 (25%)

Query: 4   GNVFMSCALEEAQNAALRNEIPV---GAVAVL-NNKIISRAGN----------------- 42
            + FM+ +L  A+ +      PV   GA  V   N+I++   N                 
Sbjct: 29  DDYFMATSLLSAKRSKD----PVTQVGACIVDSQNRIVAIGYNGFPRNCSDDVFPWSKAT 84

Query: 43  RNRELKDVT-------AHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARI 95
           +  +  D          HAE  AI       +   L    LY TL PC  CA  I    I
Sbjct: 85  KRSKKDDPLEDKKMYVVHAEANAILN----TNGMSLSGTRLYTTLFPCNECAKLIIQVGI 140

Query: 96  RRLYY----GASNPKGGGIENGTQFYTLATCHHSP 126
            ++ Y     A  PK    +       +    H P
Sbjct: 141 SQVLYLSDKYAYKPKYRASKRMLDAVGVEYKRHIP 175


>gi|83951487|ref|ZP_00960219.1| riboflavin biosynthesis protein RibD [Roseovarius nubinhibens ISM]
 gi|83836493|gb|EAP75790.1| riboflavin biosynthesis protein RibD [Roseovarius nubinhibens ISM]
          Length = 364

 Score = 59.9 bits (145), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 35/157 (22%), Positives = 52/157 (33%), Gaps = 31/157 (19%)

Query: 2   KKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTA-----HA 54
           ++    M  AL   ++A       P VG V V  ++I+ R           TA     HA
Sbjct: 3   EQDIHHMREALRLGRSAMGSAWPNPAVGCVIVAGDQIVGRG---------ATAPGGRPHA 53

Query: 55  EILAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGG 108
           E           +         YVTLEPC        CA  +  A + R+     +    
Sbjct: 54  EPQ-----ALAEAGAAARGATAYVTLEPCAHHGKTPPCAEVLIKAGVARVVVAVGDSDPR 108

Query: 109 GIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
               G +    A      E+  G+ E  +R  +  FF
Sbjct: 109 VSGRGIEMLRKAG----IEVVQGVLEDEARTDLAGFF 141


>gi|224370212|ref|YP_002604376.1| hypothetical protein HRM2_31290 [Desulfobacterium autotrophicum
           HRM2]
 gi|223692929|gb|ACN16212.1| conserved hypothetical protein [Desulfobacterium autotrophicum
           HRM2]
          Length = 167

 Score = 59.9 bits (145), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 28/124 (22%), Positives = 40/124 (32%), Gaps = 30/124 (24%)

Query: 4   GNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGN--------------RNREL 47
              FM  A   A  A    R    VGA+ V   +I+    N                 +L
Sbjct: 22  DVYFMDIARLVATRATCLRRK---VGAILVKERRILCSGYNGAPTHVPHCDVTGCLREQL 78

Query: 48  KDVTA---------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98
              +          HAE  AI           +    LY T +PC++CA  I  A I ++
Sbjct: 79  NVPSGQKHELCRGVHAEQNAIIQAA--YHGISVKGSTLYCTHKPCSICAKMIINAGIVQV 136

Query: 99  YYGA 102
            +  
Sbjct: 137 CFAT 140


>gi|306821103|ref|ZP_07454719.1| guanine deaminase [Eubacterium yurii subsp. margaretiae ATCC
          43715]
 gi|304550796|gb|EFM38771.1| guanine deaminase [Eubacterium yurii subsp. margaretiae ATCC
          43715]
          Length = 63

 Score = 59.9 bits (145), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 13/47 (27%), Positives = 21/47 (44%)

Query: 4  GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDV 50
            VFM   +E ++ A      P GAV V +++I+    N+     D 
Sbjct: 13 DEVFMEKTIELSRLAVEHGNEPFGAVLVKDDEIVFTNENQIYTKHDP 59


>gi|85014315|ref|XP_955653.1| hypothetical protein ECU09_0990 [Encephalitozoon cuniculi GB-M1]
 gi|19171347|emb|CAD27072.1| hypothetical protein [Encephalitozoon cuniculi GB-M1]
          Length = 302

 Score = 59.9 bits (145), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 22/104 (21%), Positives = 43/104 (41%), Gaps = 7/104 (6%)

Query: 27  GAVAVLNNK-IISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85
           GA  +   + I+S       +  DV  H+ + A+    +     +   +D ++  EPC  
Sbjct: 196 GACIIAGGEGIVSV----QEDTDDVLGHSVLRAVEEVSKAQVSYLCTGLDAFIPREPCLS 251

Query: 86  CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIY 129
           C+ A    RI+R++        GG  +G +     + +H   +Y
Sbjct: 252 CSMAFVHGRIKRVF--CVKRVSGGPFSGLKINYNKSLNHRYPVY 293


>gi|94264510|ref|ZP_01288297.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [delta
           proteobacterium MLMS-1]
 gi|93455069|gb|EAT05296.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [delta
           proteobacterium MLMS-1]
          Length = 151

 Score = 59.9 bits (145), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 30/126 (23%), Positives = 44/126 (34%), Gaps = 28/126 (22%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGN--------------RNRELKD 49
              FM+     AQ A       VGAV V   +I++   N                ++   
Sbjct: 11  DEYFMAITDLVAQRATCLR-RQVGAVLVRERRIVATGYNGAPSHIRHCLEVGCLRQQQGV 69

Query: 50  VTA---------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
            +          HAE  AI      L    L    LY T  PC++C+  +  A + R+YY
Sbjct: 70  PSGERHELCRGLHAEQNAIIQAA--LHGVSLQGSVLYCTNMPCSICSKMLINAAVTRIYY 127

Query: 101 --GASN 104
             G  +
Sbjct: 128 RDGYPD 133


>gi|307174184|gb|EFN64829.1| Deoxycytidylate deaminase [Camponotus floridanus]
          Length = 168

 Score = 59.9 bits (145), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 27/117 (23%), Positives = 42/117 (35%), Gaps = 32/117 (27%)

Query: 8   MSCALEEAQNAALRNEIP---VGAVAVLNNK-IISRAGN----------------RNREL 47
           M+ A   A+ +      P   VGA  V N+K I+    N                 +   
Sbjct: 1   MAIAFLSAKRSKD----PCTQVGACIVNNDKRIVGIGYNGMPMGCDDDKFPWGKGSHNRD 56

Query: 48  KDV----TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
            D       HAEI A+       +   + +  +YV L PC  CA  +  + I+ + Y
Sbjct: 57  LDTKYLYVCHAEINAVLN----KNSSDVKDCTMYVGLFPCNECAKVVIQSGIKTIIY 109


>gi|242278132|ref|YP_002990261.1| CMP/dCMP deaminase zinc-binding [Desulfovibrio salexigens DSM 2638]
 gi|242121026|gb|ACS78722.1| CMP/dCMP deaminase zinc-binding [Desulfovibrio salexigens DSM 2638]
          Length = 151

 Score = 59.9 bits (145), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 35/130 (26%), Positives = 51/130 (39%), Gaps = 28/130 (21%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAH-AEILAI 59
           M   + FM  A   A+ A       VGAVAVL+ +I++   N        TAH A++  I
Sbjct: 5   MPWPDYFMRIAHLVAERATCTRRK-VGAVAVLDKRILASGYNGP---PSGTAHCADVGCI 60

Query: 60  RM-----------GCRILSQEI------------LPEVDLYVTLEPCTMCAAAISLARIR 96
           R             CR L  E             +   ++Y T +PC +C   +  A + 
Sbjct: 61  REKMGVPSGERHELCRGLHAEQNVIIQCATHGVSMKGAEIYCTTQPCLICTKMLINAGVS 120

Query: 97  RLYYGASNPK 106
            +YY  S P 
Sbjct: 121 AIYYSESYPD 130


>gi|163745323|ref|ZP_02152683.1| CMP/dCMP deaminase, zinc-binding protein [Oceanibulbus indolifex
           HEL-45]
 gi|161382141|gb|EDQ06550.1| CMP/dCMP deaminase, zinc-binding protein [Oceanibulbus indolifex
           HEL-45]
          Length = 153

 Score = 59.9 bits (145), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 24/91 (26%), Positives = 32/91 (35%), Gaps = 19/91 (20%)

Query: 26  VGAVAV-LNNKIISRAGN---RNRELKDVTA-------------HAEILAIRMGCRILSQ 68
           VGAV V  +++I +   N   R     D                HAE  AI    RI   
Sbjct: 29  VGAVIVGPDHEICATGYNGLPRGVASVDPARFDRASGEKFYWFEHAERNAIYNAARIGVP 88

Query: 69  EILPEVDLYVTLEPCTMCAAAISLARIRRLY 99
             L    +Y+   PC  C  AI    I ++ 
Sbjct: 89  --LIGCTIYINRFPCADCTRAIIQCGIDKII 117


>gi|169623393|ref|XP_001805104.1| hypothetical protein SNOG_14935 [Phaeosphaeria nodorum SN15]
 gi|111056667|gb|EAT77787.1| hypothetical protein SNOG_14935 [Phaeosphaeria nodorum SN15]
          Length = 370

 Score = 59.9 bits (145), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 26/123 (21%), Positives = 36/123 (29%), Gaps = 33/123 (26%)

Query: 4   GNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGNRN----------------R 45
              FM  A   A  +    R    VG V V   +++S   N                   
Sbjct: 191 DQYFMQLADLAAHRSNCMKRR---VGCVIVREKRVVSTGYNGTPRGMTNCNEGGCPRCNN 247

Query: 46  ELKDVTA-------HAEILAIRMGCRILSQEILPE-VDLYVTLEPCTMCAAAISLARIRR 97
             K  T        HAE  A+    R    + +     LY    PC  C+  I+   I  
Sbjct: 248 AAKGGTGLNTCLCLHAEENALLEAGR----DRIGGSATLYCNTCPCLTCSVKITQVGISE 303

Query: 98  LYY 100
           + Y
Sbjct: 304 VVY 306


>gi|116748127|ref|YP_844814.1| zinc-binding CMP/dCMP deaminase [Syntrophobacter fumaroxidans MPOB]
 gi|116697191|gb|ABK16379.1| CMP/dCMP deaminase, zinc-binding [Syntrophobacter fumaroxidans
           MPOB]
          Length = 158

 Score = 59.9 bits (145), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 30/134 (22%), Positives = 45/134 (33%), Gaps = 41/134 (30%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGN-RNRELKDVTA-------- 52
            K   +   AL  AQ +        GAV V +++IIS   N   R+  +           
Sbjct: 5   TKSEYYTEIALSVAQRSTCLRRR-FGAVIVKSDQIISTGYNGAPRKTANCIDLGYCARKQ 63

Query: 53  ---------------HAEILAIRMGCRILSQEILPEVDLYVTL------------EPCTM 85
                          HAE+ A+    R+     +   DLY+              EPC +
Sbjct: 64  LSIPAGQNYELCRAVHAEMNAVIHASRL----DMVGADLYLAGLDVETGNQVIHPEPCLL 119

Query: 86  CAAAISLARIRRLY 99
           C   I  A I+R+ 
Sbjct: 120 CRRVIINAGIQRVV 133


>gi|224049770|ref|XP_002190430.1| PREDICTED: dCMP deaminase [Taeniopygia guttata]
          Length = 159

 Score = 59.9 bits (145), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 29/116 (25%), Positives = 40/116 (34%), Gaps = 31/116 (26%)

Query: 8   MSCALEEAQNAALRNEIP---VGAVAV-LNNKIISRAGN------------------RNR 45
           M+ A   AQ +      P   VGA  V   NKI+    N                     
Sbjct: 1   MAVAFLSAQRSKD----PSSQVGACIVNSENKIVGIGYNGMPNGCSDDVLPWTRTGANRL 56

Query: 46  ELKDV-TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
           + K     HAE+ AI       +   +    +YV L PC  CA  I  A I+ + +
Sbjct: 57  DTKYPYVCHAELNAIMN----KNSADVKGCSMYVALFPCNECAKLIIQAGIKEVIF 108


>gi|50288375|ref|XP_446616.1| hypothetical protein [Candida glabrata CBS 138]
 gi|49525924|emb|CAG59543.1| unnamed protein product [Candida glabrata]
          Length = 307

 Score = 59.9 bits (145), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 26/120 (21%), Positives = 35/120 (29%), Gaps = 29/120 (24%)

Query: 4   GNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGNRN-RELKDV---------- 50
              FM  A   A  +    R    VG V V   ++I+   N   R L +           
Sbjct: 159 DTYFMKLATLAASRSNCMKRR---VGCVIVRECRVIATGYNGTPRHLTNCFHGGCPRCND 215

Query: 51  ----------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
                       HAE  A+    R    +      LY    PC  C+  I    I  + Y
Sbjct: 216 GDSKNLHTCLCLHAEENALLEAGRDRVGQN---ATLYCDTCPCLTCSVKIVQTGITEVVY 272


>gi|149917706|ref|ZP_01906202.1| Deoxycytidylate deaminase [Plesiocystis pacifica SIR-1]
 gi|149821488|gb|EDM80888.1| Deoxycytidylate deaminase [Plesiocystis pacifica SIR-1]
          Length = 154

 Score = 59.9 bits (145), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 27/90 (30%), Positives = 36/90 (40%), Gaps = 17/90 (18%)

Query: 26  VGAVAVLNNKII-SRAGN-------------RNRELKDV-TAHAEILAIRMGCRILSQEI 70
           VG V V  ++ I S   N             ++R LK     HAE  AI    RI     
Sbjct: 27  VGCVVVGPDREIRSAGFNGLPRGIEDSAKRLQDRALKYPLICHAEENAIMHAARIGVA-- 84

Query: 71  LPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
           L     YVT  PCT CA ++  A +  + +
Sbjct: 85  LKGCTAYVTWPPCTRCARSLIQAGVDEVVF 114


>gi|296418533|ref|XP_002838885.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295634868|emb|CAZ83076.1| unnamed protein product [Tuber melanosporum]
          Length = 215

 Score = 59.5 bits (144), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 37/148 (25%), Positives = 52/148 (35%), Gaps = 24/148 (16%)

Query: 3   KGNVFMSCALEEAQNAALRNEIP----VGAVAVLN-NKIISRAGNRNRELKDVTAHAEIL 57
                M+ AL  A+ +     IP    VGA+       I+S   +R         HAE +
Sbjct: 40  DHESLMTQALAIARKSTY---IPSAFCVGAIIATPSGDILSTGYSREHPGN---THAEQV 93

Query: 58  AIRMGCRILSQEILPEVDLYVTLEPCT-------MCAAAISL-ARIRRLYYGASNPKGGG 109
           AI       S     E  +Y T+EPC+        C   I   A IRR+Y G   P    
Sbjct: 94  AIDKLLSSSSTP--EEAVVYTTMEPCSKRLSGNKSCVDRILECAWIRRVYAGVMEPVDFV 151

Query: 110 IENGTQFYTLATCHHSPEIYPGISEQRS 137
             +G      A      ++  G  E+  
Sbjct: 152 ENSGKAKLEAAGV--GYQLVEG-LEEEC 176


>gi|118397|sp|P00814|DCTD_BPT2 RecName: Full=Deoxycytidylate deaminase; AltName: Full=dCMP
           deaminase
          Length = 188

 Score = 59.5 bits (144), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 22/78 (28%), Positives = 36/78 (46%), Gaps = 8/78 (10%)

Query: 53  HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG-ASNPKGGGIE 111
           HAE+ AI    R  S   +    +YVTL PC  CA AI+ + I++L Y    +    G +
Sbjct: 104 HAELNAILFAARNGSS--IEGATMYVTLSPCPDCAKAIAQSGIKKLVYCETYDKNKPGWD 161

Query: 112 N-----GTQFYTLATCHH 124
           +     G + + +   + 
Sbjct: 162 DILRNAGIEVFNVPKLNW 179


>gi|328850996|gb|EGG00155.1| hypothetical protein MELLADRAFT_112106 [Melampsora larici-populina
           98AG31]
          Length = 304

 Score = 59.5 bits (144), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 16/61 (26%), Positives = 28/61 (45%)

Query: 69  EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEI 128
            +L  + ++ T EPC  C+ A+  +RI  L+Y       GG  +   F  L   +H   +
Sbjct: 229 YLLTNLVVFGTHEPCLCCSMALLHSRIHHLFYLLPVHGSGGCGSLWNFNNLNGLNHKFFV 288

Query: 129 Y 129
           +
Sbjct: 289 W 289


>gi|302914924|ref|XP_003051273.1| predicted protein [Nectria haematococca mpVI 77-13-4]
 gi|256732211|gb|EEU45560.1| predicted protein [Nectria haematococca mpVI 77-13-4]
          Length = 431

 Score = 59.5 bits (144), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 28/124 (22%), Positives = 37/124 (29%), Gaps = 32/124 (25%)

Query: 4   GNVFMSCALEEAQNA--ALRNEIPVGAVAV-LNNKIISRAGNRNREL------------K 48
              FM  A   AQ +    R    VG V V    ++IS   N                  
Sbjct: 231 DTYFMELASLAAQRSNCMKRR---VGCVLVGKERRVISTGYNGTPRGLLNCAEGGCPRCN 287

Query: 49  DVTA-----------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRR 97
           D ++           HAE  A+    R   +E      LY    PC  C+  I    I  
Sbjct: 288 DASSSGVGLSTCLCIHAEENALLEAGRERIRE---GSVLYCDTCPCLTCSIKICQVGISE 344

Query: 98  LYYG 101
           + Y 
Sbjct: 345 VVYA 348


>gi|258651000|ref|YP_003200156.1| riboflavin biosynthesis protein RibD [Nakamurella multipartita DSM
           44233]
 gi|258554225|gb|ACV77167.1| riboflavin biosynthesis protein RibD [Nakamurella multipartita DSM
           44233]
          Length = 366

 Score = 59.5 bits (144), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 23/119 (19%), Positives = 38/119 (31%), Gaps = 20/119 (16%)

Query: 8   MSCALEEAQNAALR---NEIPVGAVAVLNNK-IISRAGNRNRELKDVTAHAEILAIRMGC 63
           +  A E A+  A     N + VG V +      +    +R         HAE+ A+    
Sbjct: 14  LHRAAELAEYGAATALPNPV-VGCVLLAPGGWTVGEGYHRRPGG----PHAEVAALTAAG 68

Query: 64  RILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQF 116
                 +       V+LEPC        C+ A+  A + R+     +P           
Sbjct: 69  -----PLARGGTAVVSLEPCNHTGRTGPCSQALIAAGVSRVIVAVRDPWPPAAGGVDHL 122


>gi|256544495|ref|ZP_05471868.1| cytidine/deoxycytidylate deaminase family protein [Anaerococcus
           vaginalis ATCC 51170]
 gi|256399820|gb|EEU13424.1| cytidine/deoxycytidylate deaminase family protein [Anaerococcus
           vaginalis ATCC 51170]
          Length = 146

 Score = 59.5 bits (144), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 32/126 (25%), Positives = 45/126 (35%), Gaps = 34/126 (26%)

Query: 1   MKKG-----NVFMSCALEEA-----QNAALRNEIPVGAVAVL-NNKIISRAGNRNR---- 45
           M K        F+  A   A       A       VG V V   N+IIS   N +     
Sbjct: 1   MAKDRLTWNEYFIKLAHMVALRGTCDRAY------VGCVLVNGENRIISTGYNGSIKGNP 54

Query: 46  -------ELKD----VTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLAR 94
                   ++D     T HAE+ A+ + C      +      YVT  PC  C  ++  A 
Sbjct: 55  HCDEVGHTMRDGHCIATIHAEMNAL-LYCAKEGIPV-KNSICYVTHFPCLNCTKSLIQAG 112

Query: 95  IRRLYY 100
           I+ +YY
Sbjct: 113 IKEIYY 118


>gi|325125125|gb|ADY84455.1| dCMP deaminase [Lactobacillus delbrueckii subsp. bulgaricus 2038]
          Length = 160

 Score = 59.5 bits (144), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 26/116 (22%), Positives = 44/116 (37%), Gaps = 28/116 (24%)

Query: 5   NVFMSCALEEAQN-----AALRNEIPVGAVAVLNNKIISRAGNRNRELKD---------- 49
             FM  AL  AQ      A       VG+V V + +I+S   N +   +D          
Sbjct: 10  QYFMMQALVIAQRSTCDRAL------VGSVLVKDKRILSTGYNGSVSGQDHCDDVGHQLV 63

Query: 50  -----VTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
                 T H+E+ ++    +        + ++YVT  PC  C   +  A + ++ Y
Sbjct: 64  DGHCVRTIHSEMNSLISCAKNGVSTD--DTEIYVTHFPCYNCTKHLLQAGVIKINY 117


>gi|212697211|ref|ZP_03305339.1| hypothetical protein ANHYDRO_01779 [Anaerococcus hydrogenalis DSM
           7454]
 gi|212675660|gb|EEB35267.1| hypothetical protein ANHYDRO_01779 [Anaerococcus hydrogenalis DSM
           7454]
          Length = 146

 Score = 59.5 bits (144), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 32/126 (25%), Positives = 45/126 (35%), Gaps = 34/126 (26%)

Query: 1   MKKG-----NVFMSCALEEA-----QNAALRNEIPVGAVAVLN-NKIISRAGNRNR---- 45
           M K        F+  A   A       A       VG V V N N+IIS   N +     
Sbjct: 1   MAKDRLTWNEYFIKLAHMVALRGTCDRAY------VGCVLVNNENRIISTGYNGSIKGNP 54

Query: 46  -------ELKD----VTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLAR 94
                   ++D     T HAE+ A+    +      +     YVT  PC  C  ++  A 
Sbjct: 55  HCDEVGHTMRDGHCIATIHAEMNALLYCAKEGIS--VKNSICYVTHFPCLNCTKSLIQAG 112

Query: 95  IRRLYY 100
           +R +YY
Sbjct: 113 VREIYY 118


>gi|310796782|gb|EFQ32243.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Glomerella graminicola M1.001]
          Length = 436

 Score = 59.5 bits (144), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 30/179 (16%), Positives = 55/179 (30%), Gaps = 62/179 (34%)

Query: 3   KGN--VFMSCALEEAQNAALRNEIPVG----AVAV-LNNK---IISRA----GNR---NR 45
           K    ++M+ A   A  A       VG    AV V        +++ A     ++     
Sbjct: 217 KDETSLWMTLAHRVALQARKAG---VGEAMGAVIVQREGGKSTLVAVAGDARWHQEPSRS 273

Query: 46  ELKDVTAHAEILAI------------RMGCRILSQEILP--------------------- 72
              +  AH  + AI            R+     S  IL                      
Sbjct: 274 GTGNPMAHCALRAISMVAQKLVRHERRVAGHSHSPPILEYDMFQDLPLVEDELTVYNDEH 333

Query: 73  ---------EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
                     +++Y+T EPC  C+  I  +R+ ++ +    P  GG+ +  + +     
Sbjct: 334 PNTDGYLCHGMEMYLTHEPCVQCSMGILHSRMGKVVFAQRMPLTGGMCSEDRGHDHPEL 392


>gi|289644955|ref|ZP_06476996.1| CMP/dCMP deaminase zinc-binding [Frankia symbiont of Datisca
           glomerata]
 gi|289505228|gb|EFD26286.1| CMP/dCMP deaminase zinc-binding [Frankia symbiont of Datisca
           glomerata]
          Length = 224

 Score = 59.5 bits (144), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 28/127 (22%), Positives = 47/127 (37%), Gaps = 33/127 (25%)

Query: 4   GNVFMSCALEEAQN------AALRNEIPVGAVAVLNN---------KIISRAGNRNRELK 48
              ++  A+E ++       A       VGAV V  +         ++++   +R     
Sbjct: 68  DERWLRMAVEISRRCPPSPSAFS-----VGAVLVDRSAGLAADASARVLATGYSR---EL 119

Query: 49  DVTAHAEILAIRMGCRILSQEI---LPEVDLYVTLEPCT-------MCAAAISLARIRRL 98
           D   HAE +A+R   +            + LY +LEPC+        C   I  A IRR+
Sbjct: 120 DPRDHAEEVALRRLAQHAQDGPPVPAGSLTLYSSLEPCSARASRPRTCTELIIEAGIRRV 179

Query: 99  YYGASNP 105
            +    P
Sbjct: 180 VFAWREP 186


>gi|195015670|ref|XP_001984248.1| GH15113 [Drosophila grimshawi]
 gi|193897730|gb|EDV96596.1| GH15113 [Drosophila grimshawi]
          Length = 194

 Score = 59.5 bits (144), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 30/124 (24%), Positives = 48/124 (38%), Gaps = 32/124 (25%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAV-LNNKIISRAGN-------------- 42
           ++  + FM+ A+  ++ +      P   VGA  V  + +I++   N              
Sbjct: 31  LQWDDYFMATAILSSKRSKD----PSTQVGACIVDKHKRIVAIGYNGFPRNCSDDVFPWS 86

Query: 43  -----RNRELKDV-TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIR 96
                 + E K++   HAE  AI  G    +   L    LY TL PC  C   I  + IR
Sbjct: 87  KDSDSDSIENKNMYVVHAEANAILNG----NGASLDGTRLYTTLFPCNECTKLIIQSGIR 142

Query: 97  RLYY 100
            + Y
Sbjct: 143 NILY 146


>gi|269796889|ref|YP_003316344.1| riboflavin biosynthesis protein RibD [Sanguibacter keddieii DSM
           10542]
 gi|269099074|gb|ACZ23510.1| riboflavin biosynthesis protein RibD [Sanguibacter keddieii DSM
           10542]
          Length = 372

 Score = 59.5 bits (144), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 28/124 (22%), Positives = 38/124 (30%), Gaps = 30/124 (24%)

Query: 8   MSCALEEAQN---AALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
           MS ALE A+    AA       G V +  +  ++  A          TA     A+    
Sbjct: 23  MSRALELAREDRLAASLGPRG-GCVLLGADGTVLGEARTDRVARVHATA----QALAEAG 77

Query: 64  RILSQEILPEVDLYVTLEPCT----------------MCAAAISLARIRRLYYGASNPKG 107
                         VTLEPC                  CA A+  A +RR+     +P  
Sbjct: 78  H-----RAQGATAVVTLEPCCLGGDARATGPSPLPHGPCAQALVDAGVRRVVVAHLDPDP 132

Query: 108 GGIE 111
           G   
Sbjct: 133 GTSG 136


>gi|167849555|ref|ZP_02475063.1| riboflavin biosynthesis protein RibD [Burkholderia pseudomallei
          B7210]
 gi|167922717|ref|ZP_02509808.1| riboflavin biosynthesis protein RibD [Burkholderia pseudomallei
          BCC215]
          Length = 94

 Score = 59.5 bits (144), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 24/96 (25%), Positives = 32/96 (33%), Gaps = 17/96 (17%)

Query: 4  GNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
              M+ AL  A+           VG V     + +    +R         HAE+ A+R 
Sbjct: 8  DRTHMAHALRLAEQGLYTTHPNPRVGCVIARGARTLGAGWHRRAGE----PHAEVHALRE 63

Query: 62 GCRILSQEILPEVDLYVTLEPC------TMCAAAIS 91
                 E       YVTLEPC        CA A+ 
Sbjct: 64 AG-----ERARGATAYVTLEPCAHFGRTPPCANALV 94


>gi|104773493|ref|YP_618473.1| putative dCMP deaminase [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC 11842]
 gi|103422574|emb|CAI97177.1| Putative dCMP deaminase [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC 11842]
          Length = 160

 Score = 59.5 bits (144), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 26/116 (22%), Positives = 44/116 (37%), Gaps = 28/116 (24%)

Query: 5   NVFMSCALEEAQN-----AALRNEIPVGAVAVLNNKIISRAGNRNRELKD---------- 49
             FM  AL  AQ      A       VG+V V + +I+S   N +   +D          
Sbjct: 10  QYFMMQALVIAQRSTCDRAL------VGSVLVKDKRILSTGYNGSVSGQDHCDDVGHQLV 63

Query: 50  -----VTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
                 T H+E+ ++    +        + ++YVT  PC  C   +  A + ++ Y
Sbjct: 64  DGHCVRTIHSEMNSLISCAKNGVSTD--DTEIYVTHFPCYNCTKHLLQAGVIKINY 117


>gi|111024118|ref|YP_707090.1| riboflavin biosynthesis protein RibD [Rhodococcus jostii RHA1]
 gi|110823648|gb|ABG98932.1| riboflavin biosynthesis protein RibD [Rhodococcus jostii RHA1]
          Length = 350

 Score = 59.5 bits (144), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 28/137 (20%), Positives = 46/137 (33%), Gaps = 23/137 (16%)

Query: 8   MSCALEEAQNA--ALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
           M  A+  A++A         VGAV +    +I      +         HAE++A+R    
Sbjct: 14  MQIAIGAAESARGFTSPNPAVGAVVLDAAGRIAGVGMTQPPGG----PHAEVVALREAGD 69

Query: 65  ILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
                        VTLEPC        C+ A+  A +  ++Y   +P            +
Sbjct: 70  AA-----RGGTAVVTLEPCNHHGRTGPCSQALLDAGVVAVHYAVGDPNPEAAGGAETLIS 124

Query: 119 LATCHHSPEIYPGISEQ 135
                   E+  G+  Q
Sbjct: 125 A-----GVEVTSGLRAQ 136


>gi|293376240|ref|ZP_06622483.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Turicibacter sanguinis PC909]
 gi|292645132|gb|EFF63199.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Turicibacter sanguinis PC909]
          Length = 157

 Score = 59.5 bits (144), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 31/122 (25%), Positives = 40/122 (32%), Gaps = 31/122 (25%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAV-LNNKIISRAGN-------------- 42
           +     FM  AL  A  +      P   VGA  V   ++I+    N              
Sbjct: 6   LSWDEYFMGIALLSAMRSKD----PQTQVGACIVNEEHRIVGIGYNGFPHGCKDEEFPWE 61

Query: 43  ---RNRELKDV-TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98
                   K     HAE  AI     + S   L    LYV+L PC  CA  I  + I  +
Sbjct: 62  REGEFINTKYPYVVHAEQNAI-----LNSTTSLKHCRLYVSLFPCHECAKYIIQSGINEI 116

Query: 99  YY 100
            Y
Sbjct: 117 VY 118


>gi|237843195|ref|XP_002370895.1| Cytidine and deoxycytidylate deaminase zinc-binding
           domain-containing protein [Toxoplasma gondii ME49]
 gi|211968559|gb|EEB03755.1| Cytidine and deoxycytidylate deaminase zinc-binding
           domain-containing protein [Toxoplasma gondii ME49]
          Length = 178

 Score = 59.5 bits (144), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 16/62 (25%), Positives = 28/62 (45%), Gaps = 1/62 (1%)

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
                    +Y + EPC +CA A+  +RI+ L++   N   GGI  G + +     +H  
Sbjct: 102 GNYYCQGCVVYCSHEPCVLCAMALIHSRIKLLFFVHDNNVHGGITRG-RLHLDRRLNHGY 160

Query: 127 EI 128
            +
Sbjct: 161 RV 162


>gi|296111710|ref|YP_003622092.1| dCMP deaminase [Leuconostoc kimchii IMSNU 11154]
 gi|295833242|gb|ADG41123.1| dCMP deaminase [Leuconostoc kimchii IMSNU 11154]
          Length = 160

 Score = 59.5 bits (144), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 22/90 (24%), Positives = 34/90 (37%), Gaps = 17/90 (18%)

Query: 26  VGAVAVLNNKIISRAGN-------------RNRELKDVTA--HAEILAIRMGCRILSQEI 70
           VGAV V NN+II+   N                         HAE  A+    ++     
Sbjct: 30  VGAVIVQNNRIITSGYNGAVSGTPHCTDVGDLIVDGHCIRAVHAEQNALMQAAQMGIS-- 87

Query: 71  LPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
           +   ++YVT  PC  C   +  A I ++ +
Sbjct: 88  VDGAEVYVTDVPCIHCTKLLLQAGISKINF 117


>gi|153812522|ref|ZP_01965190.1| hypothetical protein RUMOBE_02921 [Ruminococcus obeum ATCC 29174]
 gi|149831447|gb|EDM86535.1| hypothetical protein RUMOBE_02921 [Ruminococcus obeum ATCC 29174]
          Length = 146

 Score = 59.5 bits (144), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 28/97 (28%), Positives = 35/97 (36%), Gaps = 23/97 (23%)

Query: 26  VGAVAVL-NNKIISRAGNRN-----------RELKDVT-------AHAEILAIRMGCRIL 66
           VGA  V  +NKI+S   N                 D          H+E+ AI       
Sbjct: 18  VGACIVSNDNKILSMGYNGFPKGCSDDEFPWAREGDPLDTKYLYVTHSELNAILN----Y 73

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
               L    LYV+L PC  CA AI  A I+ + Y   
Sbjct: 74  RGGSLEGAKLYVSLFPCNECAKAIIQAGIKTVVYDCD 110


>gi|116326433|ref|YP_803153.1| dCMP deaminase [Enterobacteria phage RB32]
 gi|228861145|ref|YP_002854168.1| dCMP deaminase [Enterobacteria phage RB51]
 gi|228861526|ref|YP_002854547.1| dCMP deaminase [Enterobacteria phage RB14]
 gi|115344026|gb|ABI95035.1| dCMP deaminase [Enterobacteria phage RB32]
 gi|227438542|gb|ACP30855.1| dCMP deaminase [Enterobacteria phage RB14]
 gi|227438819|gb|ACP31131.1| dCMP deaminase [Enterobacteria phage RB51]
 gi|291290435|dbj|BAI83230.1| dCMP deaminase [Enterobacteria phage AR1]
          Length = 193

 Score = 59.5 bits (144), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 21/55 (38%), Positives = 29/55 (52%), Gaps = 2/55 (3%)

Query: 53  HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKG 107
           HAE+ AI    R  S   +    +YVTL PC  CA AI+ + I++L Y  +  K 
Sbjct: 104 HAELNAILFAARNGSS--IEGATMYVTLSPCPDCAKAIAQSGIKKLVYCETYDKN 156


>gi|325684667|gb|EGD26821.1| deoxycytidylate deaminase [Lactobacillus delbrueckii subsp. lactis
           DSM 20072]
          Length = 160

 Score = 59.5 bits (144), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 26/116 (22%), Positives = 43/116 (37%), Gaps = 28/116 (24%)

Query: 5   NVFMSCALEEAQN-----AALRNEIPVGAVAVLNNKIISRAGNRNRELKD---------- 49
             FM  AL  AQ      A       VG+V V + +I+S   N +   +D          
Sbjct: 10  QYFMMQALVIAQRSTCDRAL------VGSVLVKDKRILSTGYNGSVSGQDHCDDVGHQLV 63

Query: 50  -----VTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
                 T H+E+ ++    +          ++YVT  PC  C   +  A + ++ Y
Sbjct: 64  DGHCVRTIHSEMNSLISCAKNGVSTD--NTEIYVTHFPCYNCTKHLLQAGVTKINY 117


>gi|20806677|ref|NP_621848.1| deoxycytidylate deaminase [Thermoanaerobacter tengcongensis MB4]
 gi|20515128|gb|AAM23452.1| Deoxycytidylate deaminase [Thermoanaerobacter tengcongensis MB4]
          Length = 168

 Score = 59.5 bits (144), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 25/98 (25%), Positives = 35/98 (35%), Gaps = 25/98 (25%)

Query: 26  VGAVAVLNNKIISRAGN--------------RNRELKDVTA---------HAEILAIRMG 62
           VGA+ V++  IIS   N                 +L              HAE  AI   
Sbjct: 48  VGAILVVDKHIISTGYNGPPTGLPHCEETGCLRDQLGIPPGERPELCRGVHAEQNAIIQA 107

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
              L         LYV+  PC +CA  +  A ++R+ Y
Sbjct: 108 A--LHGVSTKGATLYVSASPCVICAKMLINAGVKRIVY 143


>gi|38640200|ref|NP_944156.1| Cd dCMP deaminase [Aeromonas phage Aeh1]
 gi|33414885|gb|AAQ17928.1| Cd dCMP deaminase [Aeromonas phage Aeh1]
          Length = 182

 Score = 59.5 bits (144), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 30/145 (20%), Positives = 45/145 (31%), Gaps = 44/145 (30%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRE---LKDVTA------- 52
           K   F+  A   AQ +       VGA+   +++ IS   N         D  A       
Sbjct: 2   KTTTFLQNAFLVAQESKCV-SYRVGAIISKDDRPISSGYNGTISGQPNCDEVAEENGWAE 60

Query: 53  ------------------------------HAEILAIRMGCRILSQEILPEVDLYVTLEP 82
                                         HAE+ AI         + +    +Y T+ P
Sbjct: 61  YVDVPGVGKELRLRQDRSDEYSAWAKSNVIHAEMNAILFAA--HGGKSIEGATMYCTMAP 118

Query: 83  CTMCAAAISLARIRRLYYGASNPKG 107
           C  CA  I+ A+I+ L Y   +  G
Sbjct: 119 CPECAKTIAQAKIKTLVY-CEDYNG 142


>gi|227833015|ref|YP_002834722.1| riboflavin biosynthesis protein ribD [Corynebacterium aurimucosum
           ATCC 700975]
 gi|227454031|gb|ACP32784.1| riboflavin biosynthesis protein ribD [Corynebacterium aurimucosum
           ATCC 700975]
          Length = 332

 Score = 59.5 bits (144), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 30/122 (24%), Positives = 43/122 (35%), Gaps = 23/122 (18%)

Query: 8   MSCALEEAQNAAL--RN----EIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIR 60
           M  AL  A  A    R       PVGAV + +  +++     +         HAE++A+R
Sbjct: 1   MR-ALHVAMGAGEQVRGTTSPNPPVGAVILDSAGQVVGVGATQPPGG----PHAEVMALR 55

Query: 61  MGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGT 114
                            VTLEPC        CA A+  A +  +YY   +P        T
Sbjct: 56  DAGDKA-----RGGTAVVTLEPCNHTGRTGPCAQALIDASVAAVYYLHPDPTPQAGGGST 110

Query: 115 QF 116
             
Sbjct: 111 TL 112


>gi|111224596|ref|YP_715390.1| putative riboflavin/cytosine deaminase [Frankia alni ACN14a]
 gi|111152128|emb|CAJ63855.1| Putative riboflavin/cytosine deaminase [Frankia alni ACN14a]
          Length = 187

 Score = 59.5 bits (144), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 27/140 (19%), Positives = 44/140 (31%), Gaps = 44/140 (31%)

Query: 2   KKGNVFMSCALEEAQN------AALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHA 54
            +   +++ A+E  +       A       VGA+ V  +   ++   +R  E  D   HA
Sbjct: 17  DRDRYWLARAVELGRRCPPSSTAYS-----VGALIVAADGTPLAEGYSRAEEPHD---HA 68

Query: 55  EILAIRMGCRILSQEIL----------------------PEVDLYVTLEPC-------TM 85
           E +A+R     L                               +Y +LEPC         
Sbjct: 69  EEVALRRLAARLDASAAGGDPGGGVDSGGGGDPGVGVDPAGATVYSSLEPCSARASRPWT 128

Query: 86  CAAAISLARIRRLYYGASNP 105
           C   I  A I R+ +    P
Sbjct: 129 CTELILAAGIGRVVFAWREP 148


>gi|291521321|emb|CBK79614.1| Deoxycytidylate deaminase [Coprococcus catus GD/7]
          Length = 161

 Score = 59.5 bits (144), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 39/156 (25%), Positives = 58/156 (37%), Gaps = 35/156 (22%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVL-NNKIISRAGN-------------- 42
           +     FM  A    + A LR++ P   VG+  V  +NKI+S   N              
Sbjct: 9   ISWDEYFMGVA----KLAGLRSKDPNSQVGSCIVSPDNKILSIGYNGFPRGCSDDVFPWS 64

Query: 43  RNRELKDV----TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98
           R  +  D       H+E+ AI           L    +YV+L PC  C+ AI  + IR +
Sbjct: 65  REGDELDTKYFYVTHSELNAILN----YRGGSLEGSKIYVSLFPCNECSKAIIQSGIREI 120

Query: 99  YYGASNPKGG---GIENGTQFYTLATCHHSPEIYPG 131
            Y   + K G    +    +    A  H+   I  G
Sbjct: 121 IY--DSDKYGDTPAVIASRKMLDAAGVHYRRYIRSG 154


>gi|330858731|ref|YP_004415106.1| putative deoxycytidylate deaminase [Shigella phage Shfl2]
 gi|327397665|gb|AEA73167.1| putative deoxycytidylate deaminase [Shigella phage Shfl2]
          Length = 193

 Score = 59.5 bits (144), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 21/55 (38%), Positives = 29/55 (52%), Gaps = 2/55 (3%)

Query: 53  HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKG 107
           HAE+ AI    R  S   +    +YVTL PC  CA AI+ + I++L Y  +  K 
Sbjct: 104 HAELNAILFAARNGSS--IEGATMYVTLSPCPDCAKAIAQSGIKKLVYCETYDKN 156


>gi|255715123|ref|XP_002553843.1| KLTH0E08448p [Lachancea thermotolerans]
 gi|238935225|emb|CAR23406.1| KLTH0E08448p [Lachancea thermotolerans]
          Length = 323

 Score = 59.5 bits (144), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 31/147 (21%), Positives = 58/147 (39%), Gaps = 30/147 (20%)

Query: 12  LEEAQNAALRNEIPVGAVAV------LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           L  A+ A+ +      A  V       NN++I  + +R+        H+ +  IR    +
Sbjct: 172 LSLAEQASGKQ-----AAVVSAFVNPKNNEVIFVSDHRHV--CSPLDHSIMRGIRSVAEL 224

Query: 66  LS-------------QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN 112
                            +  + D+Y T EPC+MC+ A+  +RI+R  Y     K G +E+
Sbjct: 225 EHQKKQDHTNKGESETYLCLDFDVYTTHEPCSMCSMALIHSRIKRCIYLTPMNKTGCLES 284

Query: 113 ----GTQFYTLATCHHSPEIYPGISEQ 135
               G   +   + +   E +  I ++
Sbjct: 285 ESGDGYCMHNNHSLNSKYEAFRWIGDE 311


>gi|260940691|ref|XP_002614645.1| hypothetical protein CLUG_05423 [Clavispora lusitaniae ATCC 42720]
 gi|238851831|gb|EEQ41295.1| hypothetical protein CLUG_05423 [Clavispora lusitaniae ATCC 42720]
          Length = 323

 Score = 59.5 bits (144), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 30/131 (22%), Positives = 55/131 (41%), Gaps = 18/131 (13%)

Query: 24  IPVGAVAVLN----NKI-ISRAGNRNRELKDVTAHAEILAIRMGCRILSQEI-------- 70
           +P+  +         +I I    N +R+      H+ +  I M      ++         
Sbjct: 185 VPITTIIARKDDLTGEIQILFTANDSRDKH-PLEHSVMKGISMVAEDERRKRSVEKEPDL 243

Query: 71  ---LPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
                ++ +Y T EPCTMCA A+  +RIR+L Y   +PK GGI++          + + +
Sbjct: 244 GYLCRDLLIYTTHEPCTMCAMALVHSRIRQLIYVYDHPK-GGIQSSYFIGDRRDLNWTYD 302

Query: 128 IYPGISEQRSR 138
           I+  + E   +
Sbjct: 303 IWKWVGEIPCQ 313


>gi|312222461|emb|CBY02401.1| similar to deoxycytidylate deaminase [Leptosphaeria maculans]
          Length = 357

 Score = 59.5 bits (144), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 26/120 (21%), Positives = 37/120 (30%), Gaps = 27/120 (22%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGN-------RNRELKDV---TA- 52
              FM  A + A + +   +  VG   V   ++IS   N        + +       TA 
Sbjct: 198 DQYFMQLA-DLAAHRSNCMKRRVGCCIVREKRVISTGYNGTPRGMPNSIQGGCPRCNTAT 256

Query: 53  ------------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
                       HAE  A+    R     I     LY    PC  C+  I    I  + Y
Sbjct: 257 PGPHTLSTCLCLHAEENALLEAGR---DRIAANAILYCNTCPCLTCSVKIVQVGIGEVVY 313


>gi|308814577|ref|YP_003934851.1| dCMP deaminase [Shigella phage SP18]
 gi|308206169|gb|ADO19568.1| dCMP deaminase [Shigella phage SP18]
          Length = 193

 Score = 59.2 bits (143), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 22/55 (40%), Positives = 30/55 (54%), Gaps = 2/55 (3%)

Query: 53  HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKG 107
           HAE+ AI    R+ S   +    +YVTL PC  CA AIS + I++L Y  +  K 
Sbjct: 104 HAELNAILFAARMGSS--IEGATMYVTLSPCPDCAKAISQSGIKKLVYCETYDKN 156


>gi|242309140|ref|ZP_04808295.1| riboflavin biosynthesis protein RibD [Helicobacter pullorum MIT
           98-5489]
 gi|239524181|gb|EEQ64047.1| riboflavin biosynthesis protein RibD [Helicobacter pullorum MIT
           98-5489]
          Length = 343

 Score = 59.2 bits (143), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 31/138 (22%), Positives = 53/138 (38%), Gaps = 35/138 (25%)

Query: 5   NVFMSCALEEAQNAALRN--EIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRM 61
           ++++  A++EA     +      VGA  +  N K++S   N ++E      HAE+LA++ 
Sbjct: 4   SLYLELAIKEAWKTQCQTLPNPAVGAAILDKNGKLLSI--NAHQEAGKP--HAEVLALKN 59

Query: 62  G----------------------CRILSQEILPEVDLYVTLEPC------TMCAAAISLA 93
                                   +  +++I     LY TLEPC        CA+ I   
Sbjct: 60  AYFHLTQDSAILSLQESHQIHQYLKQNAKDIFHNSTLYTTLEPCMHEGKTPSCASLIKSL 119

Query: 94  RIRRLYYGASNPKGGGIE 111
            I+ L   A +P      
Sbjct: 120 GIKNLVVAAKDPNPKAQG 137


>gi|315652209|ref|ZP_07905204.1| deoxycytidylate deaminase [Eubacterium saburreum DSM 3986]
 gi|315485515|gb|EFU75902.1| deoxycytidylate deaminase [Eubacterium saburreum DSM 3986]
          Length = 164

 Score = 59.2 bits (143), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 34/131 (25%), Positives = 50/131 (38%), Gaps = 35/131 (26%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVL-NNKIISRAGN-------------- 42
           +     F+  A   A+ +      P   VGA  V  +NKI+S   N              
Sbjct: 9   INWDEYFIGVAKLSAKRSKD----PNTQVGACIVSEDNKILSMGYNGFPRGCSDEEFPWG 64

Query: 43  RNRELKDV-------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARI 95
           ++ E+ D        + H+E+ AI           L    +YVTL PC  CA AI  A I
Sbjct: 65  KDLEISDPYNAKYLYSTHSELNAILN----YRGGSLEGSKIYVTLFPCNECAKAIIQAGI 120

Query: 96  RRLYYGASNPK 106
           + + Y   + K
Sbjct: 121 KTIIY--EDDK 129


>gi|239905201|ref|YP_002951940.1| putative dCMP deaminase [Desulfovibrio magneticus RS-1]
 gi|239795065|dbj|BAH74054.1| putative dCMP deaminase [Desulfovibrio magneticus RS-1]
          Length = 153

 Score = 59.2 bits (143), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 29/128 (22%), Positives = 49/128 (38%), Gaps = 32/128 (25%)

Query: 5   NVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGN--------------RNRELK 48
           + FM  A   A+ +    R    VGAVAV + +I++   N                 +L 
Sbjct: 9   DYFMRIAYLVAERSTCLRRK---VGAVAVRDRRILATGYNGSPTGTAHCLDIGCLREKLG 65

Query: 49  DVTA---------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLY 99
             +          HAE   I   C +    I    D+Y T +PC +C   +  +++  +Y
Sbjct: 66  IPSGERHELCRGLHAEQNVIIQ-CALHGVPI-AGADIYCTTQPCLICTKMLINSQVNHIY 123

Query: 100 Y--GASNP 105
           +  G  +P
Sbjct: 124 FSQGYPDP 131


>gi|85710330|ref|ZP_01041395.1| riboflavin-specific deaminase/reductase [Erythrobacter sp. NAP1]
 gi|85689040|gb|EAQ29044.1| riboflavin-specific deaminase/reductase [Erythrobacter sp. NAP1]
          Length = 315

 Score = 59.2 bits (143), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 25/95 (26%), Positives = 35/95 (36%), Gaps = 17/95 (17%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC-- 83
           V A+ V  N +I+R             HAE +A+                LYVTLEPC  
Sbjct: 21  VAALLVQGNCVIARGW----TQGGGRPHAEAIAL--AGIAEGGA--KGATLYVTLEPCAH 72

Query: 84  -----TMCAAAISLARIRRLYYGA--SNPKGGGIE 111
                  C   +  AR  R+  G    +P+  G+ 
Sbjct: 73  QSQRGPACTDLVIAARPSRVVIGQLDPDPRTAGLG 107


>gi|320353575|ref|YP_004194914.1| dCMP deaminase [Desulfobulbus propionicus DSM 2032]
 gi|320122077|gb|ADW17623.1| dCMP deaminase [Desulfobulbus propionicus DSM 2032]
          Length = 164

 Score = 59.2 bits (143), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 30/122 (24%), Positives = 39/122 (31%), Gaps = 30/122 (24%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAV-LNNKIISRAGN-------------- 42
           +     FM+ A+     +      P   VGA      NKI+    N              
Sbjct: 9   LSWDEYFMAVAILSGHRSKD----PNTQVGACVANSQNKIVGVGYNGFPWGCSDDELPWS 64

Query: 43  RNRELKDV----TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98
           R     D       HAE+ A+           L +  LYV L PC  C   I  A IR +
Sbjct: 65  REGSYLDTKYPYVCHAELNAVLN----SITYDLRDCRLYVALFPCNECTKVIIQAGIREI 120

Query: 99  YY 100
            Y
Sbjct: 121 IY 122


>gi|126178835|ref|YP_001046800.1| CMP/dCMP deaminase, zinc-binding [Methanoculleus marisnigri JR1]
 gi|125861629|gb|ABN56818.1| CMP/dCMP deaminase, zinc-binding protein [Methanoculleus marisnigri
           JR1]
          Length = 173

 Score = 59.2 bits (143), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 26/134 (19%), Positives = 41/134 (30%), Gaps = 42/134 (31%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGN---RNRELKD-------- 49
            +   +M  A+E A+ +        GAV V    +I+S   N   R     D        
Sbjct: 16  SRTEWYMGIAVETARRSTCIRRC-YGAVVVNSAGEIVSTGHNGAPRGEAHCDELNTCIRK 74

Query: 50  -------------VTAHAEILAIRMGCRILSQEILPEVDLYVTLE-----------PCTM 85
                         + HAE+ A+    R           +Y+              PC M
Sbjct: 75  QYNIPSGERYEFCRSVHAEMNALLQAGRAA-----AGCTMYLAGFERLTGAPSYDPPCLM 129

Query: 86  CAAAISLARIRRLY 99
           C+  +  A I R+ 
Sbjct: 130 CSKMLVNAGIDRVV 143


>gi|9632715|ref|NP_049828.1| Cd dCMP deaminase [Enterobacteria phage T4]
 gi|118398|sp|P16006|DCTD_BPT4 RecName: Full=Deoxycytidylate deaminase; AltName: Full=dCMP
           deaminase; Short=dCD
 gi|5354339|gb|AAD42546.1|AF158101_133 Cd dCMP deaminase [Enterobacteria phage T4]
 gi|215838|gb|AAA32489.1| deoxycytidylate deaminase (EC 3.5.4.12) [Enterobacteria phage T4]
 gi|299780576|gb|ADJ39938.1| deoxycytidylate deaminase [Enterobacteria phage T4T]
          Length = 193

 Score = 59.2 bits (143), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 21/55 (38%), Positives = 29/55 (52%), Gaps = 2/55 (3%)

Query: 53  HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKG 107
           HAE+ AI    R  S   +    +YVTL PC  CA AI+ + I++L Y  +  K 
Sbjct: 104 HAELNAILFAARNGSS--IEGATMYVTLSPCPDCAKAIAQSGIKKLVYCETYDKN 156


>gi|291276854|ref|YP_003516626.1| putative priboflavin-specific deaminase [Helicobacter mustelae
           12198]
 gi|290964048|emb|CBG39888.1| putative priboflavin-specific deaminase [Helicobacter mustelae
           12198]
          Length = 345

 Score = 59.2 bits (143), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 35/177 (19%), Positives = 60/177 (33%), Gaps = 45/177 (25%)

Query: 1   MKKGNVFMSCALEEAQN--AALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEIL 57
           M    + MS  +++A            V A+ V    +I+S   ++    K    HAE+L
Sbjct: 1   MLSHQLLMSLCIKKAWEFQTLTLPNPAVAAMVVSGEGEILSLCAHQ----KSGAPHAEVL 56

Query: 58  AIRMG----------------------CRILSQEILPEVDLYVTLEPC------TMCAAA 89
           +++                         R   Q +  +  +YVTLEPC        CA  
Sbjct: 57  SLKEAYYKLTKDENIKNITNSQELHQILRNHHQNLFKDCSIYVTLEPCTCYGKTPPCAEI 116

Query: 90  ISLARIRRLYYGA--SNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
           +    I+ +  GA  S    GG E   +            +   I E+  + ++  F
Sbjct: 117 LQSIGIKSVIIGALESTKNQGGKEMLEK--------SGARVTARILEKECQDLLLPF 165


>gi|195431281|ref|XP_002063675.1| GK15805 [Drosophila willistoni]
 gi|194159760|gb|EDW74661.1| GK15805 [Drosophila willistoni]
          Length = 352

 Score = 59.2 bits (143), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 15/65 (23%), Positives = 33/65 (50%), Gaps = 1/65 (1%)

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
                +    D+Y+  EPC MC+ A+  +R +R+++  ++   G +    Q +T+   +H
Sbjct: 280 KYGPYLCTGYDVYLLQEPCLMCSMALVHSRAKRIFFLQTSDN-GALLTRFQLHTVKELNH 338

Query: 125 SPEIY 129
             E++
Sbjct: 339 HYEVF 343


>gi|91218013|ref|ZP_01254965.1| deoxycytidylate deaminase [Psychroflexus torquis ATCC 700755]
 gi|91183871|gb|EAS70262.1| deoxycytidylate deaminase [Psychroflexus torquis ATCC 700755]
          Length = 143

 Score = 59.2 bits (143), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 27/112 (24%), Positives = 40/112 (35%), Gaps = 15/112 (13%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRN-RELKDV--------- 50
           +K    ++  A E  + +  + +  VGA+ V +  IIS   N       +          
Sbjct: 7   LKFDKAYLRMAREWGKLSHCQRKQ-VGAIIVKDRMIISDGFNGTPSGFNNACEDKEGLTK 65

Query: 51  --TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
               HAE  AI                LY+ L PC  C+  I  A I R+ Y
Sbjct: 66  WYVLHAEANAILKVAASTQSS--KNATLYINLSPCKECSKLIHQAGIIRVVY 115


>gi|312262684|gb|ADQ52979.1| Cd dCMP deaminase [Aeromonas phage PX29]
          Length = 182

 Score = 59.2 bits (143), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 30/145 (20%), Positives = 44/145 (30%), Gaps = 44/145 (30%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRE---LKDVTA------- 52
           K   F+  A   AQ +       VGA+   +++ IS   N         D  A       
Sbjct: 2   KTTTFLQKAFLVAQESKCV-SYRVGAIISKDDRPISSGYNGTISGQPNCDEVAEENGWAE 60

Query: 53  ------------------------------HAEILAIRMGCRILSQEILPEVDLYVTLEP 82
                                         HAE+ AI           +    +Y T+ P
Sbjct: 61  YVNVPGVGTELRLRQDKSDEYSAWAKSNVIHAEMNAILFAANSGKP--IEGATMYCTMAP 118

Query: 83  CTMCAAAISLARIRRLYYGASNPKG 107
           C  CA  I+ A+I+ L Y   +  G
Sbjct: 119 CPECAKTIAQAKIKTLVY-CEDYNG 142


>gi|45199011|ref|NP_986040.1| AFR493Cp [Ashbya gossypii ATCC 10895]
 gi|44985086|gb|AAS53864.1| AFR493Cp [Ashbya gossypii ATCC 10895]
          Length = 324

 Score = 59.2 bits (143), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 25/120 (20%), Positives = 46/120 (38%), Gaps = 30/120 (25%)

Query: 36  IIS---RAGNRNRELKDVTAHAEILAIRMGCR----------------ILSQEILPEVDL 76
           II+   R GN          H+ +  I+   R                     +  + D+
Sbjct: 197 IIAVDQRGGN-------PLHHSIMNGIKEVARDELQRREAVERGTSVGRTDTYLCLDFDV 249

Query: 77  YVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI----ENGTQFYTLATCHHSPEIYPGI 132
           Y T EPC+MCA A+  +RI+R  +    P+ G +     +G   ++    +   E++  +
Sbjct: 250 YTTHEPCSMCAMALIHSRIKRCIFIQPMPETGALRPESGDGYCMHSSKALNSKYEVFQWV 309


>gi|317154506|ref|YP_004122554.1| CMP/dCMP deaminase zinc-binding protein [Desulfovibrio aespoeensis
           Aspo-2]
 gi|316944757|gb|ADU63808.1| CMP/dCMP deaminase zinc-binding protein [Desulfovibrio aespoeensis
           Aspo-2]
          Length = 152

 Score = 59.2 bits (143), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 30/120 (25%), Positives = 43/120 (35%), Gaps = 28/120 (23%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEIL-AIR--- 60
             FM  A   AQ +       VGA+AV   +I++   N         AH E +  IR   
Sbjct: 9   EYFMRIAHLVAQRSTCTR-RAVGAIAVRGKRILATGYNGVPTN---IAHCEEVGCIRDKL 64

Query: 61  --------MGCRILSQE------------ILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
                     CR L  E             L   D+Y T +PC +C   +    +R +Y+
Sbjct: 65  KIPSGERHELCRGLHAEQNVIIQAATHHLDLTGCDIYCTTKPCILCTKMLINCEVRNIYF 124


>gi|326536808|ref|YP_004301240.1| dCMP deaminase [Aeromonas phage 65]
 gi|312263154|gb|ADQ53410.1| dCMP deaminase [Aeromonas phage 65]
          Length = 179

 Score = 59.2 bits (143), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 23/110 (20%), Positives = 36/110 (32%), Gaps = 37/110 (33%)

Query: 26  VGAVAVLNNKIISRAGNRNRELK-DVTAHA------------------------------ 54
           VG V V N ++IS   N  R    +   HA                              
Sbjct: 24  VGTVIVKNGRVISTGYNGTRAGGINPDEHAINMGWAERAVDGVRLYPKYEDEYSSWANTH 83

Query: 55  ----EILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
               E+ A+    R      +    L  +L PC+ CA  ++ A I+++ Y
Sbjct: 84  VIHSEMNALLYAARSGQS--VDGATLVTSLSPCSNCAKHMAAAGIKKVIY 131


>gi|155370644|ref|YP_001426178.1| hypothetical protein FR483_N546L [Paramecium bursaria Chlorella
           virus FR483]
 gi|155123964|gb|ABT15831.1| hypothetical protein FR483_N546L [Paramecium bursaria Chlorella
           virus FR483]
          Length = 144

 Score = 59.2 bits (143), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 28/108 (25%), Positives = 39/108 (36%), Gaps = 16/108 (14%)

Query: 6   VFMSCALEEAQNAALRNEIPVGAVAVLNNKII-SRAGN--------RNRELKDVTA---- 52
            ++  A  +AQ  +      V A+ + NN+ I S   N                T     
Sbjct: 8   KYLQLAEFQAQLFSKDESTKVAALVLDNNQNIRSTGFNGLPRGFEETTERWSKPTKYDYV 67

Query: 53  -HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLY 99
            HAE  AI    R  +   L    L+ TL PC  CA  I  A I ++ 
Sbjct: 68  VHAEANAICSAARNGAT--LAGCTLFSTLFPCNECAKLIIQAGIAKIV 113


>gi|326426566|gb|EGD72136.1| riboflavin biosynthesis protein RibA [Salpingoeca sp. ATCC 50818]
          Length = 1091

 Score = 59.2 bits (143), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 17/62 (27%), Positives = 25/62 (40%), Gaps = 8/62 (12%)

Query: 4   GNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
             +FM  AL  A+   +    P   VG V V +  +I    +R   +     HAEI A+ 
Sbjct: 580 DELFMRRALSLARLGRVSA-PPNPWVGCVLVRDGHVIGEGYHRRAGM----PHAEIEAMA 634

Query: 61  MG 62
             
Sbjct: 635 DA 636



 Score = 54.1 bits (130), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 19/85 (22%), Positives = 30/85 (35%), Gaps = 10/85 (11%)

Query: 71  LPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
           L     YVTLEPC        C  A+  A + R     ++P       G  F        
Sbjct: 713 LAGATAYVTLEPCHHQGRTGPCDQALVQAGVARTVIAVTDPDERVSARGLAFLRSRG--- 769

Query: 125 SPEIYPGISEQRSRQIIQDFFKERR 149
             E+  G+    +  ++  +  +RR
Sbjct: 770 -VEVATGVCGAEAEALLAPYLHQRR 793


>gi|34495582|ref|NP_899797.1| cytidine deaminase [Chromobacterium violaceum ATCC 12472]
 gi|34101437|gb|AAQ57806.1| probable Cytidine deaminase [Chromobacterium violaceum ATCC 12472]
          Length = 499

 Score = 59.2 bits (143), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 22/71 (30%), Positives = 29/71 (40%), Gaps = 2/71 (2%)

Query: 53  HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN 112
           HAE+ AI   C       L    LY T  PC  CA  +  + I+R+ Y    PK   +E 
Sbjct: 345 HAEMDAILN-CARNGTPTL-GTTLYCTTFPCHNCAKHLIASGIKRVVYIEPYPKSKAMEF 402

Query: 113 GTQFYTLATCH 123
                +  T H
Sbjct: 403 HDDSISYNTSH 413


>gi|155121696|gb|ABT13564.1| hypothetical protein MT325_M010L [Paramecium bursaria chlorella
           virus MT325]
          Length = 119

 Score = 59.2 bits (143), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 30/112 (26%), Positives = 44/112 (39%), Gaps = 28/112 (25%)

Query: 8   MSCALEEAQNAALRNEIPV--GAVAVLNNKIISRAGNRNREL-KDVTAHAEILAIRMGCR 64
           +  A++EA   ALR++ P       +   KII+R  N  R+     + HAEI AI     
Sbjct: 4   LHEAIDEAAEYALRSDGPFKHSCFIMSGKKIIARGNNHVRQQIGTSSVHAEIDAI----- 58

Query: 65  ILSQEILPEVDLYVTL----------------EPCTMCAAAISLARIRRLYY 100
                 +   DLY  L                 PC MC +A+    I+ + Y
Sbjct: 59  ----WRINNTDLYDNLKAIIIRSSPTGRLGNSRPCVMCMSALKQHGIKTIVY 106


>gi|269126069|ref|YP_003299439.1| CMP/dCMP deaminase zinc-binding protein [Thermomonospora curvata
           DSM 43183]
 gi|268311027|gb|ACY97401.1| CMP/dCMP deaminase zinc-binding protein [Thermomonospora curvata
           DSM 43183]
          Length = 151

 Score = 58.8 bits (142), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 33/135 (24%), Positives = 49/135 (36%), Gaps = 22/135 (16%)

Query: 2   KKGNVFMSCALEEAQN------AALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHA 54
           ++   ++  A + A+       A       VGAV V  +   ++R  +R     D  AHA
Sbjct: 4   RQDRHWLEVACDLARRCPPSQTAFS-----VGAVIVGADGTELARGFSR---ETDPKAHA 55

Query: 55  EILAIRMGCRILSQEILPEVDLYVTLEPC-------TMCAAAISLARIRRLYYGASNPKG 107
           E  A+       +   L    +Y +LEPC         CA  I+ A I R+ Y    P  
Sbjct: 56  EEEALAKLRAAGAAADLGGATIYSSLEPCGRRLSRPRPCARLIAEAGIGRVVYAWREPVL 115

Query: 108 GGIENGTQFYTLATC 122
                G Q    A  
Sbjct: 116 FVEGGGEQVLRAAGI 130


>gi|156101656|ref|XP_001616521.1| hypothetical protein [Plasmodium vivax SaI-1]
 gi|148805395|gb|EDL46794.1| hypothetical protein PVX_084270 [Plasmodium vivax]
          Length = 386

 Score = 58.8 bits (142), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 13/57 (22%), Positives = 30/57 (52%)

Query: 77  YVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGIS 133
           Y++ EPC MCA A+  +R++ + +   N   G + +  + + +   +H  ++Y  + 
Sbjct: 327 YLSHEPCFMCAMAMVHSRVKCVIFDEVNRDNGALFSRAKLHCVKNLNHHFKVYRTVR 383



 Score = 39.9 bits (93), Expect = 0.12,   Method: Composition-based stats.
 Identities = 17/73 (23%), Positives = 29/73 (39%), Gaps = 8/73 (10%)

Query: 2   KKGNVFMSCALEEAQN-AALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           KK   F+  A+   +N    +     G V   N+KII+ +G  +        HA +LAI 
Sbjct: 141 KKFIHFVKIAIRVGKNFGTCQG----GCVLTHNHKIIACSG--DNIKNHPLHHAVMLAIE 194

Query: 61  MGC-RILSQEILP 72
               ++     + 
Sbjct: 195 QVSFKLRHLWRMK 207


>gi|289577394|ref|YP_003476021.1| CMP/dCMP deaminase zinc-binding protein [Thermoanaerobacter
           italicus Ab9]
 gi|289527107|gb|ADD01459.1| CMP/dCMP deaminase zinc-binding protein [Thermoanaerobacter
           italicus Ab9]
          Length = 147

 Score = 58.8 bits (142), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 26/98 (26%), Positives = 35/98 (35%), Gaps = 25/98 (25%)

Query: 26  VGAVAVLNNKIISRAGN--------------RNRELKDVTA---------HAEILAIRMG 62
           VGA+ V++  IIS   N                 +L   +          HAE  AI   
Sbjct: 27  VGAILVVDKHIISTGYNGPPTGLAHCEETGCLRDQLGIPSGERPELCRGVHAEQNAIIQA 86

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
              L         LYV   PC MCA  +  A ++R+ Y
Sbjct: 87  A--LHGVSTKGATLYVNASPCVMCAKMLINAGVKRIVY 122


>gi|116621717|ref|YP_823873.1| CMP/dCMP deaminase, zinc-binding [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116224879|gb|ABJ83588.1| CMP/dCMP deaminase, zinc-binding [Candidatus Solibacter usitatus
           Ellin6076]
          Length = 133

 Score = 58.8 bits (142), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 25/93 (26%), Positives = 32/93 (34%), Gaps = 17/93 (18%)

Query: 26  VGAVAVLNN-KIISRAGNR---------NRELKDVTA-----HAEILAIRMGCRILSQEI 70
           +G V V  N +I S   N             L   T      HAE  AI    R  +   
Sbjct: 12  IGCVIVGPNHEIRSTGYNSFPRGIRDDVPERLVRPTKYLWIEHAERNAICNAARAGTAT- 70

Query: 71  LPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
                +YV + PC  CA A+  A I  +   A 
Sbjct: 71  -EGCTIYVDIMPCMDCARAVVQAGIVAVVISAE 102


>gi|189345709|ref|YP_001942238.1| CMP/dCMP deaminase, zinc-binding [Chlorobium limicola DSM 245]
 gi|189339856|gb|ACD89259.1| CMP/dCMP deaminase, zinc-binding [Chlorobium limicola DSM 245]
          Length = 112

 Score = 58.8 bits (142), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 16/98 (16%), Positives = 35/98 (35%), Gaps = 9/98 (9%)

Query: 56  ILAIRMGCRILSQEIL-----PEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI 110
           ++A+      L    L     P+++L  + EPC MC  AI  + IR++  GA++      
Sbjct: 1   MVALAAAEHYLKTYDLGLPELPDLELVTSTEPCAMCFGAIIWSGIRKVISGATSRDAEAA 60

Query: 111 ENGTQFYTLATC----HHSPEIYPGISEQRSRQIIQDF 144
                                +   +    +  +++ +
Sbjct: 61  GFDEGPKPDNWIACLETRGITVVSEVCRAEAGTVLKAY 98


>gi|302691412|ref|XP_003035385.1| hypothetical protein SCHCODRAFT_51868 [Schizophyllum commune H4-8]
 gi|300109081|gb|EFJ00483.1| hypothetical protein SCHCODRAFT_51868 [Schizophyllum commune H4-8]
          Length = 163

 Score = 58.8 bits (142), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 40/166 (24%), Positives = 54/166 (32%), Gaps = 47/166 (28%)

Query: 8   MSCALEEAQNAALRNEIP----VGAVAVLNN------KIISRAGNRNRELKDVTAHAEIL 57
           M  AL EA         P    VG V    +       ++S   +R         HAE  
Sbjct: 1   MRLALAEAARCE---PTPTAFCVGCVLAYRDPSNSEPAVLSTGYSRELPGN---THAEAN 54

Query: 58  AIRMGCRILS-----------------QEILPEVDLYVTLEPC-------TMCAAAISLA 93
           A+   C +                    +IL +VD+Y TLEPC         CA A+  A
Sbjct: 55  ALTKLCALTPAEVAARLPSFDPSKASVDDILRQVDVYTTLEPCSIRTSGLAPCADALIAA 114

Query: 94  RIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIY--PGISEQRS 137
            +RR + G   P       G +    A      EI    G  E+  
Sbjct: 115 GVRRCFIGVGEPDDFVQCEGARKLKDAG----VEIVWLKG-MEEEC 155


>gi|258542930|ref|YP_003188363.1| riboflavin biosynthesis protein RibD [Acetobacter pasteurianus IFO
           3283-01]
 gi|256634008|dbj|BAH99983.1| riboflavin biosynthesis protein RibD [Acetobacter pasteurianus IFO
           3283-01]
 gi|256637068|dbj|BAI03037.1| riboflavin biosynthesis protein RibD [Acetobacter pasteurianus IFO
           3283-03]
 gi|256640120|dbj|BAI06082.1| riboflavin biosynthesis protein RibD [Acetobacter pasteurianus IFO
           3283-07]
 gi|256643177|dbj|BAI09132.1| riboflavin biosynthesis protein RibD [Acetobacter pasteurianus IFO
           3283-22]
 gi|256646232|dbj|BAI12180.1| riboflavin biosynthesis protein RibD [Acetobacter pasteurianus IFO
           3283-26]
 gi|256649284|dbj|BAI15225.1| riboflavin biosynthesis protein RibD [Acetobacter pasteurianus IFO
           3283-32]
 gi|256652271|dbj|BAI18205.1| riboflavin biosynthesis protein RibD [Acetobacter pasteurianus IFO
           3283-01-42C]
 gi|256655328|dbj|BAI21255.1| riboflavin biosynthesis protein RibD [Acetobacter pasteurianus IFO
           3283-12]
          Length = 350

 Score = 58.8 bits (142), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 26/107 (24%), Positives = 44/107 (41%), Gaps = 17/107 (15%)

Query: 10  CALEEAQN--AALRNEIPVGAVAVL--NNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
            A+ EA +         PVG V +    + ++  A ++       TAHAE LA+     +
Sbjct: 22  LAVAEAWSFVGRTAPNPPVGCVLLDAQGDVLVVAAHHQA-----GTAHAERLAVEQARAL 76

Query: 66  LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPK 106
              E +      VTLEPC        C  A+    ++ ++ G ++P 
Sbjct: 77  GVVERID--TAVVTLEPCNHTGRTPPCTEALLSTPVKTVWIGCADPN 121


>gi|15828749|ref|NP_326109.1| deoxycytidylate deaminase (dCMP deaminase) [Mycoplasma pulmonis UAB
           CTIP]
 gi|14089691|emb|CAC13451.1| DEOXYCYTIDYLATE DEAMINASE (DCMP DEAMINASE) [Mycoplasma pulmonis]
          Length = 154

 Score = 58.8 bits (142), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 31/121 (25%), Positives = 49/121 (40%), Gaps = 30/121 (24%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNK-IISRAGNRN------------ 44
           +     FM      A+ ++LR++ P   VGA  + + K +I+   N              
Sbjct: 7   IDWDEYFM----LLAKVSSLRSKDPNTRVGACIINDKKRVIALGYNGMPLGNDFFPWSKD 62

Query: 45  -RELKDV----TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLY 99
               KD       HAE+ AI     + +  +L    LY TL PC+ CA  I+   I+ + 
Sbjct: 63  AENEKDKKYAYVIHAELNAI-----LNTTTLLENAVLYTTLFPCSNCAKTITQTGIKEIV 117

Query: 100 Y 100
           Y
Sbjct: 118 Y 118


>gi|224438172|ref|ZP_03659107.1| riboflavin biosynthesis protein RibD [Helicobacter cinaedi CCUG
           18818]
 gi|313144617|ref|ZP_07806810.1| riboflavin biosynthesis protein RibD [Helicobacter cinaedi CCUG
           18818]
 gi|313129648|gb|EFR47265.1| riboflavin biosynthesis protein RibD [Helicobacter cinaedi CCUG
           18818]
          Length = 330

 Score = 58.8 bits (142), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 28/127 (22%), Positives = 40/127 (31%), Gaps = 34/127 (26%)

Query: 26  VGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMG---------------------- 62
           VGA+    N +I+SR  +        + HAE++AI+                        
Sbjct: 29  VGAIITRENGEILSRGVH----SLAGSPHAEVIAIKQAYFTLTQDSKILNLESSLELHNF 84

Query: 63  CRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116
                  I     LYV+LEPC        CA  I      ++  G  +        G Q 
Sbjct: 85  LLHNHNGIFKNHSLYVSLEPCNHYGKTPPCANLIKELGFAKVVIGTKDSHSLASG-GMQT 143

Query: 117 YTLATCH 123
              A  H
Sbjct: 144 LQEAGIH 150


>gi|226503799|ref|NP_001152254.1| deoxycytidylate deaminase [Zea mays]
 gi|195654307|gb|ACG46621.1| deoxycytidylate deaminase [Zea mays]
 gi|223948705|gb|ACN28436.1| unknown [Zea mays]
          Length = 228

 Score = 58.8 bits (142), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 28/125 (22%), Positives = 40/125 (32%), Gaps = 33/125 (26%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKII-SRAGN-------------- 42
           +   + FM+ A   A+ +      P   VGA  V    II     N              
Sbjct: 68  ISWDDYFMAIAFLSAERSKD----PNRQVGACLVSQEGIILGIGYNGFPRGCSDDKLPWA 123

Query: 43  RNRELKDVT-------AHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARI 95
           +     D          HAE+ AI       +        LYVT+ PC  CA  I  + +
Sbjct: 124 KKSASGDPLETKFPYVVHAEVNAILNTNHASA----AGQKLYVTMFPCNECAKIIIQSGV 179

Query: 96  RRLYY 100
             + Y
Sbjct: 180 SEVIY 184


>gi|195627622|gb|ACG35641.1| deoxycytidylate deaminase [Zea mays]
          Length = 228

 Score = 58.8 bits (142), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 28/125 (22%), Positives = 40/125 (32%), Gaps = 33/125 (26%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKII-SRAGN-------------- 42
           +   + FM+ A   A+ +      P   VGA  V    II     N              
Sbjct: 68  ISWDDYFMAIAFLSAERSKD----PNRQVGACLVSQEGIILGIGYNGFPRGCSDDKLPWA 123

Query: 43  RNRELKDVT-------AHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARI 95
           +     D          HAE+ AI       +        LYVT+ PC  CA  I  + +
Sbjct: 124 KKSASGDPLETKFPYVVHAEVNAILNTNHASA----AGQKLYVTMFPCNECAKIIIQSGV 179

Query: 96  RRLYY 100
             + Y
Sbjct: 180 SEVIY 184


>gi|328948242|ref|YP_004365579.1| CMP/dCMP deaminase zinc-binding protein [Treponema succinifaciens
           DSM 2489]
 gi|328448566|gb|AEB14282.1| CMP/dCMP deaminase zinc-binding protein [Treponema succinifaciens
           DSM 2489]
          Length = 165

 Score = 58.8 bits (142), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 24/120 (20%), Positives = 37/120 (30%), Gaps = 27/120 (22%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAG--------------NRNRELKD 49
              FM  A   A+ A        G V   +N+I+                  +  R++  
Sbjct: 14  DEYFMEVARTIAKRATCDRGR-SGCVIAKDNQILVTGYVGSPAGLAHCDEVGHLMRKMIH 72

Query: 50  V----------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLY 99
                      T HAE  AI    +      +    +Y  + PC  CA  I    I+R+ 
Sbjct: 73  ADGSVTQHCVRTVHAEQNAICQAAKRGIS--IDGATVYCKMTPCRTCAMLIINCGIKRVV 130


>gi|296123847|ref|YP_003631625.1| CMP/dCMP deaminase zinc-binding protein [Planctomyces limnophilus
           DSM 3776]
 gi|296016187|gb|ADG69426.1| CMP/dCMP deaminase zinc-binding protein [Planctomyces limnophilus
           DSM 3776]
          Length = 503

 Score = 58.8 bits (142), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 21/69 (30%), Positives = 25/69 (36%), Gaps = 2/69 (2%)

Query: 53  HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN 112
           HAE+ AI    R     +     LY T  PC  CA  I  A I R+ Y    PK   +E 
Sbjct: 346 HAEMEAILSCARNCVSTV--GATLYCTTFPCHNCAKHIVAAGIERVVYVEPYPKSKALEF 403

Query: 113 GTQFYTLAT 121
                    
Sbjct: 404 HDDSIAPPG 412


>gi|45198541|ref|NP_985570.1| AFR023Wp [Ashbya gossypii ATCC 10895]
 gi|44984492|gb|AAS53394.1| AFR023Wp [Ashbya gossypii ATCC 10895]
          Length = 300

 Score = 58.8 bits (142), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 27/120 (22%), Positives = 35/120 (29%), Gaps = 30/120 (25%)

Query: 4   GNVFMSCALEEAQNAALRNE---IPVGAVAVLNNKIISRAGN---------------RNR 45
              FM      A+ AA R+      VG V V   ++I+   N               R  
Sbjct: 153 DVYFMQ----LARLAASRSNCMKRRVGCVIVRACRVIATGYNGTPRHLRNCHDGGCARCN 208

Query: 46  ELKDVTA-----HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
                       HAE  A+    R    E      LY    PC  C+  I    I  + Y
Sbjct: 209 GGGSALHTCLCLHAEENALLEAGRERVGE---GAVLYCDTCPCLTCSVKIVQTGITEVVY 265


>gi|332711139|ref|ZP_08431073.1| deoxycytidylate deaminase [Lyngbya majuscula 3L]
 gi|332350121|gb|EGJ29727.1| deoxycytidylate deaminase [Lyngbya majuscula 3L]
          Length = 190

 Score = 58.8 bits (142), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 32/128 (25%), Positives = 45/128 (35%), Gaps = 42/128 (32%)

Query: 4   GNVFMSCALEEAQNAALRNE---IPVGAVAVLNNKIISRAGNRN---------------- 44
              F    L  A+ AA R+     PVGAV V NN+I++   N +                
Sbjct: 9   DEYF----LMMAKLAATRSTCLAFPVGAVIVQNNQILATGYNGSPSGSIHCTAQGYCYPG 64

Query: 45  RELKDVTAHAEILAIRMGCRILSQEIL------------PEVDLYVTLEPCTMCAAAISL 92
               D +         M  R +  E                  +YVTLEPC  C   I  
Sbjct: 65  LSSCDASR-------TMPSRAVHAEANAIAFAAKHGIATAGASIYVTLEPCVSCLKLIIS 117

Query: 93  ARIRRLYY 100
           A I++++Y
Sbjct: 118 AGIKKVFY 125


>gi|225012149|ref|ZP_03702586.1| CMP/dCMP deaminase zinc-binding [Flavobacteria bacterium MS024-2A]
 gi|225003704|gb|EEG41677.1| CMP/dCMP deaminase zinc-binding [Flavobacteria bacterium MS024-2A]
          Length = 143

 Score = 58.8 bits (142), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 24/93 (25%), Positives = 31/93 (33%), Gaps = 24/93 (25%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKDVTA-----------------HAEILAIRMGCRILSQ 68
           VGA+ V +  IIS   N        +                  HAE  AI         
Sbjct: 31  VGALIVKDRMIISDGYNGT-----PSGFENVCEDEEHYTKWYVLHAEANAILKVASSTQS 85

Query: 69  EILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
                  LY+TL PC  C+  I  + I R+ Y 
Sbjct: 86  --CKGATLYITLSPCKDCSKLIHQSGIVRVVYA 116


>gi|115440135|ref|NP_001044347.1| Os01g0765000 [Oryza sativa Japonica Group]
 gi|57899567|dbj|BAD87146.1| deoxycytidylate deaminase-like [Oryza sativa Japonica Group]
 gi|113533878|dbj|BAF06261.1| Os01g0765000 [Oryza sativa Japonica Group]
 gi|215678846|dbj|BAG95283.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 248

 Score = 58.8 bits (142), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 28/125 (22%), Positives = 40/125 (32%), Gaps = 33/125 (26%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKII-SRAGN-------------- 42
           +   + FM+ A   A+ +      P   VGA  V    II     N              
Sbjct: 74  ISWDDYFMAIAFLSAKRSKD----PNRQVGACLVSQEGIILGIGYNGFPRGCSDNKLPWA 129

Query: 43  RNRELKDVT-------AHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARI 95
           +     D          HAE+ AI       +        LYVT+ PC  CA  I  + +
Sbjct: 130 KKSAKGDPLETKYPYVVHAEVNAILNTNHASA----AGQKLYVTMFPCNECAKIIIQSGV 185

Query: 96  RRLYY 100
             + Y
Sbjct: 186 SEVIY 190


>gi|308516912|emb|CBW47017.1| hypothetical protein [Roseovarius sp. 217 phage 1]
          Length = 143

 Score = 58.8 bits (142), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 32/113 (28%), Positives = 48/113 (42%), Gaps = 23/113 (20%)

Query: 11  ALEEAQNAALRNEIP---VGAVAVLNNKIISR-AGN---RNRELKDV-----------TA 52
           AL  AQ  +LR+  P   VGAV +  +K I+    N   R  + KD+             
Sbjct: 9   ALGLAQAVSLRSRDPSTKVGAVIIRPDKTIASMGYNGFPRTMQDKDIWWNDRTEKYARVI 68

Query: 53  HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNP 105
           HAE+ A+        +E +  + LY T   C  CA  +  A IR +++  S  
Sbjct: 69  HAEMNALLNA-----KESVNGMQLYCTHPCCEHCAKHVIAAGIRHVHFYTSEE 116


>gi|303245769|ref|ZP_07332052.1| CMP/dCMP deaminase zinc-binding [Desulfovibrio fructosovorans JJ]
 gi|302493032|gb|EFL52897.1| CMP/dCMP deaminase zinc-binding [Desulfovibrio fructosovorans JJ]
          Length = 154

 Score = 58.8 bits (142), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 29/128 (22%), Positives = 48/128 (37%), Gaps = 32/128 (25%)

Query: 5   NVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGN--------------RNRELK 48
           + FM  A   A+ +    R    VGAVAV + +I++   N                 ++ 
Sbjct: 9   DYFMRIAYLVAERSTCLRRK---VGAVAVRDRRILATGYNGSPSGTAHCLDIGCLREQMG 65

Query: 49  DVTA---------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLY 99
             +          HAE   I   C +    I    D+Y T +PC +C   +   +I  +Y
Sbjct: 66  IPSGERHELCRGLHAEQNVIIQ-CALHGVPI-AGADIYCTTQPCLICTKMLINCQINNIY 123

Query: 100 Y--GASNP 105
           +  G  +P
Sbjct: 124 FSQGYPDP 131


>gi|170088388|ref|XP_001875417.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164650617|gb|EDR14858.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 164

 Score = 58.8 bits (142), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 40/170 (23%), Positives = 55/170 (32%), Gaps = 51/170 (30%)

Query: 8   MSCALEEAQNAALRNEIP------VGAVAVL------NNKIISRAGNRNRELKDVTAHAE 55
           M  AL EA        IP      VG V         ++ IIS   +R         HAE
Sbjct: 1   MRLALLEAAKC-----IPTPTAFCVGCVITTRPPQSTSSVIISTGHSRELFGN---THAE 52

Query: 56  ILAIRMG-----------------CRILSQEILPEVDLYVTLEPC-------TMCAAAIS 91
             A+                      +    IL + D+Y TLEPC         C AA+ 
Sbjct: 53  ANALSKAHTLSVDQLRALFPTLDPSELDINTILSQSDVYTTLEPCSIRTSGLAPCVAALI 112

Query: 92  LARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIY--PGISEQRSRQ 139
            A++RR + G + P       G +    A      E+    G  E+    
Sbjct: 113 GAKVRRCFIGVAEPLDFVECEGARKLKEAG----VEVVWLGG-LEEECLA 157


>gi|302416409|ref|XP_003006036.1| conserved hypothetical protein [Verticillium albo-atrum VaMs.102]
 gi|261355452|gb|EEY17880.1| conserved hypothetical protein [Verticillium albo-atrum VaMs.102]
          Length = 429

 Score = 58.8 bits (142), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 29/166 (17%), Positives = 57/166 (34%), Gaps = 56/166 (33%)

Query: 3   KGN--VFMSCALEEAQNAALRN-EIPVGAVAVL--NN--KIISRA----GNR---NRELK 48
           K    ++M+ A   A++A       P+GAV +   N   +++  A     ++        
Sbjct: 210 KDETSLWMALAHRVARSAYDAGIGEPMGAVIIQRENGKSELLGLAGDARWHQEPSRSGTG 269

Query: 49  DVTAHAEILAIRMGCRILSQ---------------------------------------- 68
           +  AH  + A+ M  + L +                                        
Sbjct: 270 NPMAHCVLRAMSMVAQKLVRHERQKVGLPFVHSNLEFDCFQDQPLLEEERILFEEEHPNS 329

Query: 69  --EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN 112
              +   ++LY T EPC  C+ A+  +R+ ++ +    P  GGI +
Sbjct: 330 EGYLCHGLELYTTHEPCVECSMAMLHSRMGKIVFCNRMPLTGGIAS 375


>gi|237748443|ref|ZP_04578923.1| CMP/dCMP deaminase [Oxalobacter formigenes OXCC13]
 gi|229379805|gb|EEO29896.1| CMP/dCMP deaminase [Oxalobacter formigenes OXCC13]
          Length = 164

 Score = 58.8 bits (142), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 30/120 (25%), Positives = 47/120 (39%), Gaps = 30/120 (25%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGN-----------------------RN 44
           M+ A+   +NA  +    VGAV V +N+IIS   N                       R 
Sbjct: 1   MNIAIAVRENANCKGRK-VGAVIVRDNRIISTGYNGTPEGFTNCMDGGCVRCGKREEYRR 59

Query: 45  RELK----DVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
              +     +  HAE  A+    R  +   + +  ++ TL PC  C   +  A+IR +YY
Sbjct: 60  EGKRGYDECICVHAEQNALISAARFGNA--IEDSVIFSTLRPCFDCTKLMLQAKIRAVYY 117


>gi|194874728|ref|XP_001973453.1| GG16092 [Drosophila erecta]
 gi|190655236|gb|EDV52479.1| GG16092 [Drosophila erecta]
          Length = 199

 Score = 58.8 bits (142), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 31/126 (24%), Positives = 43/126 (34%), Gaps = 37/126 (29%)

Query: 4   GNVFMSCALEEAQNAALRNEIPV---GAVAVLN-NKIISRAGN----------------- 42
            + FM+ +L  A+ +      PV   GA  V + N+I++   N                 
Sbjct: 25  DDYFMATSLLSAKRSKD----PVTQVGACIVDSRNRIVAIGYNGFPRNCSDDVFPWSKAK 80

Query: 43  -RNRELKDVT-------AHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLAR 94
            +     D          HAE  AI           L    LY TL PC  CA  I  A 
Sbjct: 81  KKRAHDFDPLEDKKLYVVHAEANAILN----SIGMSLTGTRLYTTLFPCNECAKLIIQAG 136

Query: 95  IRRLYY 100
           I ++ Y
Sbjct: 137 ISQVLY 142


>gi|158313558|ref|YP_001506066.1| CMP/dCMP deaminase zinc-binding [Frankia sp. EAN1pec]
 gi|158108963|gb|ABW11160.1| CMP/dCMP deaminase zinc-binding [Frankia sp. EAN1pec]
          Length = 162

 Score = 58.8 bits (142), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 26/116 (22%), Positives = 46/116 (39%), Gaps = 25/116 (21%)

Query: 4   GNVFMSCALEEAQN------AALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEI 56
              ++  A+E  +       A       VGA+ V  +   ++   +R  E  D   HAE 
Sbjct: 20  DRHWLGRAVELGRRCPPSVTAFA-----VGALVVAADGTPVAEGYSRAEEPAD---HAEE 71

Query: 57  LAIRMGCRILSQEILPEVDLYVTLEPCT-------MCAAAISLARIRRLYYGASNP 105
           +A+R   R+    +     +Y +LEPC+        C   +  A +RR+ +    P
Sbjct: 72  VALR---RLPPGGLPAGATVYSSLEPCSARASRPRTCTELLLAAGVRRVVFAWREP 124


>gi|227538660|ref|ZP_03968709.1| hypothetical protein HMPREF0765_2904 [Sphingobacterium
          spiritivorum ATCC 33300]
 gi|227241579|gb|EEI91594.1| hypothetical protein HMPREF0765_2904 [Sphingobacterium
          spiritivorum ATCC 33300]
          Length = 54

 Score = 58.4 bits (141), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 12/35 (34%), Positives = 18/35 (51%)

Query: 1  MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNK 35
          +     +M  AL  A+ A   +E+P+GAV V   K
Sbjct: 12 IDPDEFYMKAALTLAKKAYEEDEVPIGAVIVSQGK 46


>gi|296416059|ref|XP_002837698.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295633581|emb|CAZ81889.1| unnamed protein product [Tuber melanosporum]
          Length = 334

 Score = 58.4 bits (141), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 21/98 (21%), Positives = 28/98 (28%), Gaps = 26/98 (26%)

Query: 26  VGAVAVLNNKIISRAGNRNREL------------KDVT-----------AHAEILAIRMG 62
           VG V V   ++IS   N                  + T            HAE  A+   
Sbjct: 202 VGCVLVRGKRVISTGYNGTPRNLVNCNEGGCKRCNNGTEGGVGLMTCLCIHAEENALLEA 261

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
            R    +      LY    PC  C+  I    I  + Y
Sbjct: 262 GRERVGD---GATLYCDTCPCLTCSIKIVQVGITEVVY 296


>gi|227504400|ref|ZP_03934449.1| diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Corynebacterium striatum ATCC 6940]
 gi|227199048|gb|EEI79096.1| diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Corynebacterium striatum ATCC 6940]
          Length = 344

 Score = 58.4 bits (141), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 30/124 (24%), Positives = 44/124 (35%), Gaps = 25/124 (20%)

Query: 1   MKKGNVFMSCALEEAQNAAL--RN----EIPVGAVAVL-NNKIISRAGNRNRELKDVTAH 53
           MK     +  AL  A  A    R       PVGAV +     ++     +         H
Sbjct: 1   MKLD---LDAALIRAMEAGQSVRGTTSPNPPVGAVILDAEGNLVGTGATQPVGG----PH 53

Query: 54  AEILAIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKG 107
           AE++A++                 VTLEPC        CA A+  A I ++Y+   +P G
Sbjct: 54  AEVMALQEAG-----SSARGGIAVVTLEPCNHTGRTGPCAEALIAADISQVYFLHPDPNG 108

Query: 108 GGIE 111
               
Sbjct: 109 VAAG 112


>gi|113475737|ref|YP_721798.1| CMP/dCMP deaminase [Trichodesmium erythraeum IMS101]
 gi|110166785|gb|ABG51325.1| CMP/dCMP deaminase, zinc-binding [Trichodesmium erythraeum IMS101]
          Length = 180

 Score = 58.4 bits (141), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 27/144 (18%), Positives = 45/144 (31%), Gaps = 31/144 (21%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHA--------E 55
              F+  A   A  +      PVGAV V + ++++   N      +   H         E
Sbjct: 12  DEYFLMIAKLAATRSTCLA-FPVGAVIVKDKQVLATGYNGPPSGSN---HCTSQGFCYPE 67

Query: 56  ILAIRMGCRILSQEIL-----------------PEVDLYVTLEPCTMCAAAISLARIRRL 98
           + +     + L    +                     +YVTLEPC  C   I  + I+ +
Sbjct: 68  LSS-CDASKALPSRSVHAEANAIAQAAKHGICTNGAIIYVTLEPCIYCLKLIISSGIKEV 126

Query: 99  YYGASNPKGGGIENGTQFYTLATC 122
           +Y  S    GG       +     
Sbjct: 127 FYETS-FNSGGKAALRDLFIQDGL 149


>gi|157164068|ref|YP_001466380.1| riboflavin biosynthesis protein RibD [Campylobacter concisus 13826]
 gi|112801624|gb|EAT98968.1| riboflavin biosynthesis protein RibD [Campylobacter concisus 13826]
          Length = 353

 Score = 58.4 bits (141), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 34/191 (17%), Positives = 52/191 (27%), Gaps = 58/191 (30%)

Query: 3   KGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
               +M  AL EA         P   VG + +  N+ I          K    HAE  AI
Sbjct: 2   NDEFYMGLALSEAWK-FQILTYPNPAVGCLVLDENEQILSC---KAHEKAGYLHAEPTAI 57

Query: 60  RMG-CRI---------------------------------------LSQEILPEVDLYVT 79
               C+                                            +L     YVT
Sbjct: 58  LFALCKKSEKFKDDFIKAYNAKFSSDIKENEFGLLEPKFSYEFILNNHSNLLKNSKAYVT 117

Query: 80  LEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGIS 133
           LEPC        CA  +       +  G+ +        G      A  +    +  GI 
Sbjct: 118 LEPCSHHGKTPPCANLLKELGFSDVIIGSHDENKIASGGG-NLLQSAGVN----VKFGIL 172

Query: 134 EQRSRQIIQDF 144
           ++R  ++++ F
Sbjct: 173 KERCDKLLEPF 183


>gi|46137423|ref|XP_390403.1| hypothetical protein FG10227.1 [Gibberella zeae PH-1]
          Length = 467

 Score = 58.4 bits (141), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 29/124 (23%), Positives = 38/124 (30%), Gaps = 32/124 (25%)

Query: 4   GNVFMSCALEEAQNA--ALRNEIPVGAVAV-LNNKIISRAGNRN-RELKDV--------- 50
              FM  A   AQ +    R    VG V V    ++IS   N   R L++          
Sbjct: 232 DLYFMELASLAAQRSNCMKRR---VGCVLVGKERRVISTGYNGTPRGLQNCADGGCPRCN 288

Query: 51  -------------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRR 97
                          HAE  A+    R   +E      LY    PC  C+  I    I  
Sbjct: 289 DGNSSGVGLSTCLCIHAEENALLEAGRERIRE---GSILYCDTCPCLTCSIKICQVGISE 345

Query: 98  LYYG 101
           + Y 
Sbjct: 346 VVYA 349


>gi|322710269|gb|EFZ01844.1| putative dCMP deaminase [Metarhizium anisopliae ARSEF 23]
          Length = 381

 Score = 58.4 bits (141), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 29/138 (21%), Positives = 43/138 (31%), Gaps = 35/138 (25%)

Query: 4   GNVFMSCALEEAQNA--ALRNEIPVGAVAV-LNNKIISRAGN---------------RNR 45
              FM+ A   AQ +    R    VG V V    ++IS   N               R  
Sbjct: 225 DTYFMALASLAAQRSNCMKRR---VGCVLVGRERRVISTGYNGTPRGIRNCADGGCPRCN 281

Query: 46  ELKD-----VTA---HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRR 97
           E         T    HAE  A+    R   ++      LY    PC  C+  I    I  
Sbjct: 282 EGNSSGVGLATCLCIHAEENALLEAGRERIRD---GSVLYCDTCPCLTCSIKICQVGIGE 338

Query: 98  LYYG---ASNPKGGGIEN 112
           + Y    + + +   + +
Sbjct: 339 VVYAHGYSMDKEAAAVFS 356


>gi|73748255|ref|YP_307494.1| putative deoxycytidylate deaminase [Dehalococcoides sp. CBDB1]
 gi|147669037|ref|YP_001213855.1| CMP/dCMP deaminase, zinc-binding [Dehalococcoides sp. BAV1]
 gi|289432306|ref|YP_003462179.1| CMP/dCMP deaminase zinc-binding protein [Dehalococcoides sp. GT]
 gi|73659971|emb|CAI82578.1| putative deoxycytidylate deaminase [Dehalococcoides sp. CBDB1]
 gi|146269985|gb|ABQ16977.1| CMP/dCMP deaminase, zinc-binding protein [Dehalococcoides sp. BAV1]
 gi|288946026|gb|ADC73723.1| CMP/dCMP deaminase zinc-binding protein [Dehalococcoides sp. GT]
          Length = 157

 Score = 58.4 bits (141), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 30/122 (24%), Positives = 43/122 (35%), Gaps = 27/122 (22%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGN--------------RNRELKD 49
              F+  A   A+ +       VGAVAV +  I+S   N                 +   
Sbjct: 7   DEYFLKIAAVVAERSTCVRHH-VGAVAVRDKHILSSGYNGAPAGLTDCLELGCLRDQNGI 65

Query: 50  VTA---------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRR-LY 99
            +          HAE   I      L    L    +Y T  PC +CA  ++ ARI+R + 
Sbjct: 66  PSGTRHEICRAVHAEQNVIIQAS--LHGTSLEGATVYATHTPCVLCAKMLTNARIKRYVS 123

Query: 100 YG 101
           YG
Sbjct: 124 YG 125


>gi|300812075|ref|ZP_07092523.1| putative ComE operon protein 2 [Lactobacillus delbrueckii subsp.
           bulgaricus PB2003/044-T3-4]
 gi|300496914|gb|EFK31988.1| putative ComE operon protein 2 [Lactobacillus delbrueckii subsp.
           bulgaricus PB2003/044-T3-4]
          Length = 174

 Score = 58.4 bits (141), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 26/116 (22%), Positives = 43/116 (37%), Gaps = 28/116 (24%)

Query: 5   NVFMSCALEEAQN-----AALRNEIPVGAVAVLNNKIISRAGNRNRELKD---------- 49
             FM  AL  AQ      A       VG+V V + +I+S   N +   +D          
Sbjct: 24  QYFMMQALVIAQRSTCDRAL------VGSVLVKDKRILSTGYNGSVSGQDHCDDVGHQLV 77

Query: 50  -----VTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
                 T H+E+ ++    +          ++YVT  PC  C   +  A + ++ Y
Sbjct: 78  DGHCVRTIHSEMNSLISCAKNGVSTD--NTEIYVTHFPCYNCTKHLLQAGVIKINY 131


>gi|187251580|ref|YP_001876062.1| deoxycytidylate deaminase [Elusimicrobium minutum Pei191]
 gi|186971740|gb|ACC98725.1| Deoxycytidylate deaminase [Elusimicrobium minutum Pei191]
          Length = 168

 Score = 58.4 bits (141), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 33/155 (21%), Positives = 44/155 (28%), Gaps = 58/155 (37%)

Query: 26  VGAVAVLNNKIISRAGNRN------------------RELKDVTA--------------- 52
           VGAV V +N++IS   N                       +  T                
Sbjct: 26  VGAVLVKDNRVISIGYNGVPSGQCHCDDNFAEIYKKEFSSQYATLEEFLKSPDFFKVHGQ 85

Query: 53  -------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNP 105
                  HAE  AI    +           +YVTL PC  CA  I  A I R+Y+     
Sbjct: 86  WSMDNELHAEQNAILFAAKNGIST--AGATVYVTLSPCINCAKVIVSAGIERVYF----- 138

Query: 106 KGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140
                      Y  +   +      GI     RQ+
Sbjct: 139 --------LDLYDRSQEGNVFLAKSGI---ECRQL 162


>gi|326522122|dbj|BAK04189.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 233

 Score = 58.0 bits (140), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 28/125 (22%), Positives = 40/125 (32%), Gaps = 33/125 (26%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKII-SRAGN-------------- 42
           +   + FM+ A   A+ +      P   VGA  V    II     N              
Sbjct: 71  ISWDDYFMAIAFLSAERSKD----PNRQVGACLVSQEGIILGIGYNGFPRGCSDDKLPWA 126

Query: 43  RNRELKDVT-------AHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARI 95
           +     D          HAE+ AI       +        LYVT+ PC  CA  I  + +
Sbjct: 127 KKSARGDPLETKYPYVVHAEVNAILNTNHASA----AGQKLYVTMFPCNECAKIIIQSGV 182

Query: 96  RRLYY 100
             + Y
Sbjct: 183 SEVIY 187


>gi|298250252|ref|ZP_06974056.1| riboflavin biosynthesis protein RibD [Ktedonobacter racemifer DSM
           44963]
 gi|297548256|gb|EFH82123.1| riboflavin biosynthesis protein RibD [Ktedonobacter racemifer DSM
           44963]
          Length = 372

 Score = 58.0 bits (140), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 29/108 (26%), Positives = 44/108 (40%), Gaps = 22/108 (20%)

Query: 53  HAEILAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPK 106
           HAE+ A+     +         DLYVTLEPC        C  AI  A IR +   + +P 
Sbjct: 50  HAEVHALNDAGELA-----RGADLYVTLEPCCVTIHTPPCTRAILAAGIRHVIVSSLDPN 104

Query: 107 G--GGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQ---DFFKERR 149
               G    TQ           E+  G+  + + +II+    F +++R
Sbjct: 105 PLVSGQG-LTQLREA-----GVEVTVGVGAEETDEIIRPFATFIRQQR 146


>gi|308272937|emb|CBX29541.1| hypothetical protein N47_J05220 [uncultured Desulfobacterium sp.]
          Length = 153

 Score = 58.0 bits (140), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 28/120 (23%), Positives = 42/120 (35%), Gaps = 26/120 (21%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGN--------------RNRELKD 49
              FM      A+ +       VGA+ V + +I+S   N                 ++K 
Sbjct: 11  DTYFMDITTLVAKRSTCLR-RSVGALIVKDKRILSTGYNGAPSGLKHCLEIGCLREKMKI 69

Query: 50  VTA---------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
            +          HAE  AI             +  LY T  PC++CA  I  A I ++YY
Sbjct: 70  ASGERHELCRGIHAEQNAIIQAAFHGVSIR--DAVLYCTNLPCSICAKMIINAGIIKIYY 127


>gi|225680830|gb|EEH19114.1| cytosine deaminase [Paracoccidioides brasiliensis Pb03]
          Length = 214

 Score = 58.0 bits (140), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 28/104 (26%), Positives = 40/104 (38%), Gaps = 7/104 (6%)

Query: 11  ALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILA----IRMGCRI 65
           ALEEA+       +PVGA  V    + + R G           H ++ A           
Sbjct: 112 ALEEARKGLAEGSVPVGACLVSVTARFLGRDGTCALTFLQA-KHTQLQAGISPFENSG-H 169

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109
           L   +   V +Y  L P  MC  A  L R++R+  G +    GG
Sbjct: 170 LPASVYVGVTMYTALSPGDMCTGAWVLYRVKRIVIGENATFIGG 213


>gi|303390709|ref|XP_003073585.1| hypothetical protein Eint_090960 [Encephalitozoon intestinalis ATCC
           50506]
 gi|303302732|gb|ADM12225.1| hypothetical protein Eint_090960 [Encephalitozoon intestinalis ATCC
           50506]
          Length = 262

 Score = 58.0 bits (140), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 19/113 (16%), Positives = 43/113 (38%), Gaps = 7/113 (6%)

Query: 27  GAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMC 86
           GA  + + K          +  +V  H+ + A+    +     +    D ++  EPC  C
Sbjct: 154 GACIIADGKQELSIH---EDTDNVLGHSILKAVEEVSKAQILYLCTGFDAFILKEPCLSC 210

Query: 87  AAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139
           + A+   RI+R++    +P+  G  +  +       +H   +Y    ++    
Sbjct: 211 SMALVHGRIKRVFCLKRDPE--GPFSRIKINYNKNLNHRYPVY--FMDETCAD 259


>gi|261213199|ref|ZP_05927482.1| putative deoxycytidylate deaminase [Vibrio sp. RC341]
 gi|260837617|gb|EEX64311.1| putative deoxycytidylate deaminase [Vibrio sp. RC341]
          Length = 243

 Score = 58.0 bits (140), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 20/63 (31%), Positives = 28/63 (44%), Gaps = 2/63 (3%)

Query: 53  HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN 112
           HAE+ AI    R        + DLY T  PC  CA  I  + I+R+ Y    PK   ++ 
Sbjct: 94  HAEMEAILACARSDIST--KDADLYCTTFPCHNCAKHIVASGIKRVVYVEPYPKSKALDF 151

Query: 113 GTQ 115
            + 
Sbjct: 152 HSD 154


>gi|229524866|ref|ZP_04414271.1| deoxycytidylate deaminase-related protein [Vibrio cholerae bv.
           albensis VL426]
 gi|229338447|gb|EEO03464.1| deoxycytidylate deaminase-related protein [Vibrio cholerae bv.
           albensis VL426]
          Length = 506

 Score = 58.0 bits (140), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 20/63 (31%), Positives = 28/63 (44%), Gaps = 2/63 (3%)

Query: 53  HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN 112
           HAE+ AI    R        + DLY T  PC  CA  I  + I+R+ Y    PK   ++ 
Sbjct: 357 HAEMEAILACARSDIST--KDADLYCTTFPCHNCAKHIVASGIKRVVYVEPYPKSKALDF 414

Query: 113 GTQ 115
            + 
Sbjct: 415 HSD 417


>gi|255931347|ref|XP_002557230.1| Pc12g03450 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211581849|emb|CAP79972.1| Pc12g03450 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 177

 Score = 58.0 bits (140), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 36/131 (27%), Positives = 49/131 (37%), Gaps = 33/131 (25%)

Query: 3   KGNVFMSCALEEAQNAALRNEIP------VGAVAV--LNNKIISRAGNRNRELK---DV- 50
               FM  AL +AQ +      P      VGAV V   N K++S   +         D  
Sbjct: 13  DHEAFMDLALIQAQKS-----PPGANKFCVGAVLVDADNGKVLSTGYSLEYAQNYKGDPG 67

Query: 51  TAHAEILA-IRMGCRI-LSQEILPE-----VDLYVTLEPC-------TMCAAAI--SLAR 94
           T HAE    I++     L +E + E       LY T+EPC         C   I    + 
Sbjct: 68  TTHAEQCCFIKIADEHNLPEERIHEVLPANTALYTTMEPCNERLSSNMTCTTRILRLKSA 127

Query: 95  IRRLYYGASNP 105
           I+ +Y G   P
Sbjct: 128 IKTVYVGIKEP 138


>gi|290994440|ref|XP_002679840.1| predicted protein [Naegleria gruberi]
 gi|284093458|gb|EFC47096.1| predicted protein [Naegleria gruberi]
          Length = 357

 Score = 58.0 bits (140), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 5/63 (7%)

Query: 72  PEVDLYVTLEPCTMCAAAISLARIRRLYY--GASNPKGGGIENGTQ---FYTLATCHHSP 126
             +DL+++ EPC MCA A+  +RIRR+Y+     N  GG I    Q    +  +  +H  
Sbjct: 290 KGLDLFISHEPCCMCAMALLHSRIRRIYFVHECGNNFGGLINKVNQEYCVHENSKLNHHF 349

Query: 127 EIY 129
           ++Y
Sbjct: 350 DVY 352


>gi|242003371|ref|XP_002422714.1| Deoxycytidylate deaminase, putative [Pediculus humanus corporis]
 gi|212505536|gb|EEB09976.1| Deoxycytidylate deaminase, putative [Pediculus humanus corporis]
          Length = 172

 Score = 58.0 bits (140), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 26/116 (22%), Positives = 40/116 (34%), Gaps = 31/116 (26%)

Query: 8   MSCALEEAQNAALRNEIP---VGAVAVLNNK-IISRAGNR------------NRELKDVT 51
           M+ A   A+ +      P   VGA  V ++K I+    N              +      
Sbjct: 1   MANAFLAAKRSKD----PSTQVGACIVDDDKKIVGIGYNGFPIGCDDDDFPWTKNSDSPL 56

Query: 52  -------AHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
                   HAE+ AI       +   +    +YV L PC  CA  I  + I+ + Y
Sbjct: 57  ENKHFYVCHAEMNAILN----KNSANIKGSKIYVVLFPCNECAKFIIQSGIKEVIY 108


>gi|198458362|ref|XP_001361009.2| GA10648 [Drosophila pseudoobscura pseudoobscura]
 gi|198136314|gb|EAL25585.2| GA10648 [Drosophila pseudoobscura pseudoobscura]
          Length = 369

 Score = 58.0 bits (140), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 14/65 (21%), Positives = 30/65 (46%), Gaps = 1/65 (1%)

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
                +    D+Y+  EPC MC+ A   +R +R+++   +   G +    Q + +   +H
Sbjct: 297 KYGPYLCTGYDVYLLQEPCLMCSMAFVHSRAKRIFFLRPSDN-GALVTRFQLHAVKELNH 355

Query: 125 SPEIY 129
             E++
Sbjct: 356 HYEVF 360


>gi|291287820|ref|YP_003504636.1| CMP/dCMP deaminase zinc-binding protein [Denitrovibrio acetiphilus
           DSM 12809]
 gi|290884980|gb|ADD68680.1| CMP/dCMP deaminase zinc-binding protein [Denitrovibrio acetiphilus
           DSM 12809]
          Length = 151

 Score = 57.6 bits (139), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 23/98 (23%), Positives = 35/98 (35%), Gaps = 25/98 (25%)

Query: 26  VGAVAVLNNKIISRAGN--------------RNRELKDVTA---------HAEILAIRMG 62
           VGA+ V N  I++   N                 +LK  +          HAE  AI   
Sbjct: 27  VGALIVKNRHILATGYNGVPSGIRHCEETGCLREQLKIPSGQRHEICRGLHAEQNAIIQA 86

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
                   +    LY   +PC++CA  I  + I ++ Y
Sbjct: 87  A--YHGISINGAVLYCNTKPCSICAKMICNSGIIKVVY 122


>gi|255530903|ref|YP_003091275.1| zinc-binding CMP/dCMP deaminase [Pedobacter heparinus DSM 2366]
 gi|255343887|gb|ACU03213.1| CMP/dCMP deaminase zinc-binding [Pedobacter heparinus DSM 2366]
          Length = 151

 Score = 57.6 bits (139), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 32/120 (26%), Positives = 47/120 (39%), Gaps = 29/120 (24%)

Query: 4   GNVFMSCALEEAQNA---ALRNEIPVGAVAVLNNKIISRAGN------------------ 42
            ++FM+ A + A  +     +    VGAV   + +IIS   N                  
Sbjct: 8   NHIFMNLASDLAGRSHCVRAQ----VGAVLTKDTRIISIGYNGPPAGTHNCDEEWPEAGC 63

Query: 43  --RNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
              +R    +  HAE  AI  G  I +   +    LY TL PC  CA  I  + IR ++Y
Sbjct: 64  ARDSRGSCSLALHAEENAILYG--IKNGSKIEGSTLYTTLSPCIACARLILSSGIRVVHY 121


>gi|9631183|ref|NP_047965.1| gp20 [Streptomyces phage phiC31]
 gi|3947493|emb|CAA07144.1| gp20 [Streptomyces phage phiC31]
          Length = 117

 Score = 57.6 bits (139), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 27/102 (26%), Positives = 31/102 (30%), Gaps = 32/102 (31%)

Query: 26  VGAVAV-LNNKIISRAGN--------------RNRELKDVT-------------AHAEIL 57
           VGAV V  N+++     N                R                    HAE  
Sbjct: 12  VGAVLVNANHEVRGTGYNGAPSGVPGCASAGACPRGQLSAVECAPNSDYANCVADHAERN 71

Query: 58  AIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLY 99
           AIR          L    LY T EPC  C   I  A IRR+ 
Sbjct: 72  AIRHA----PSAELAGATLYTTREPCPACWTLIRAAGIRRVV 109


>gi|24667298|ref|NP_649197.1| CG6951, isoform A [Drosophila melanogaster]
 gi|24667302|ref|NP_730502.1| CG6951, isoform B [Drosophila melanogaster]
 gi|9296958|sp|Q9VWA2|DCTD_DROME RecName: Full=Probable deoxycytidylate deaminase; AltName:
           Full=dCMP deaminase
 gi|7293676|gb|AAF49046.1| CG6951, isoform A [Drosophila melanogaster]
 gi|23093067|gb|AAN11625.1| CG6951, isoform B [Drosophila melanogaster]
 gi|41058187|gb|AAR99137.1| RE06943p [Drosophila melanogaster]
 gi|220950846|gb|ACL87966.1| CG6951-PA [synthetic construct]
 gi|220959594|gb|ACL92340.1| CG6951-PA [synthetic construct]
          Length = 203

 Score = 57.6 bits (139), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 31/125 (24%), Positives = 42/125 (33%), Gaps = 36/125 (28%)

Query: 4   GNVFMSCALEEAQNAALRNEIPV---GAVAVL-NNKIISRAGNR--NRELKDV------- 50
            + FM+ +L  A+ +      PV   GA  V   N+I++   N        DV       
Sbjct: 29  DDYFMATSLLSAKRSKD----PVTQVGACIVDSQNRIVAIGYNGFPRNCSDDVFPWSKAK 84

Query: 51  ---------------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARI 95
                            HAE  AI       +   L    LY TL PC  CA  I    I
Sbjct: 85  KGSQEFDPLEDKKMYVVHAEANAILN----SNGMSLSGTRLYTTLFPCNECAKLIIQVGI 140

Query: 96  RRLYY 100
            ++ Y
Sbjct: 141 SQVLY 145


>gi|195154078|ref|XP_002017949.1| GL17026 [Drosophila persimilis]
 gi|194113745|gb|EDW35788.1| GL17026 [Drosophila persimilis]
          Length = 369

 Score = 57.6 bits (139), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 14/65 (21%), Positives = 30/65 (46%), Gaps = 1/65 (1%)

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
                +    D+Y+  EPC MC+ A   +R +R+++   +   G +    Q + +   +H
Sbjct: 297 KYGPYLCTGYDVYLLQEPCLMCSMAFVHSRAKRIFFLRPSDN-GALVTRFQLHAVKELNH 355

Query: 125 SPEIY 129
             E++
Sbjct: 356 HYEVF 360


>gi|302823271|ref|XP_002993289.1| hypothetical protein SELMODRAFT_136875 [Selaginella moellendorffii]
 gi|300138862|gb|EFJ05614.1| hypothetical protein SELMODRAFT_136875 [Selaginella moellendorffii]
          Length = 192

 Score = 57.6 bits (139), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 32/127 (25%), Positives = 43/127 (33%), Gaps = 37/127 (29%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKII-SRAGN-------------- 42
           +   + FMS A   AQ +      P   VGA  V  + +I     N              
Sbjct: 2   LSWDDYFMSIAFLSAQRSKD----PIRQVGACLVSQDYVILGIGYNGFPRGCSDDKLPWA 57

Query: 43  RNRELKDVT-------AHAEILAI--RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLA 93
           +     D+         HAE+ AI  R       Q       LYVT+ PC  CA  I  A
Sbjct: 58  KKSRDGDLLKTKYPYVCHAEVNAILNRNHASASGQR------LYVTMFPCNECAKVIIQA 111

Query: 94  RIRRLYY 100
            I  + +
Sbjct: 112 GIAEVIF 118


>gi|110638641|ref|YP_678850.1| cytosine/adenosine deaminase [Cytophaga hutchinsonii ATCC 33406]
 gi|110281322|gb|ABG59508.1| cytosine/adenosine deaminase [Cytophaga hutchinsonii ATCC 33406]
          Length = 413

 Score = 57.6 bits (139), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 30/123 (24%), Positives = 41/123 (33%), Gaps = 14/123 (11%)

Query: 12  LEEAQNAALRNEIPVGAVAVLN--NKIISRAGNRN---------RELKDVTAHAEILAIR 60
           L +A  AA +    VG + V N    +I    N               D TAH E   + 
Sbjct: 22  LNQALEAAAQGTFAVGGMIVDNQTGNVICAMHNNVLKPLFGSSQNFTFDPTAHGERQLVY 81

Query: 61  MGCRILSQEILPE---VDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFY 117
                  Q  LP+   + +  TL+PC MCA  +  A          +  G        F 
Sbjct: 82  WYYANRHQLNLPDPEYLTIITTLDPCAMCAGTLLTAGFNVGVIAIDDFAGINYNQTFNFD 141

Query: 118 TLA 120
           TL 
Sbjct: 142 TLP 144


>gi|195591779|ref|XP_002085616.1| GD14864 [Drosophila simulans]
 gi|194197625|gb|EDX11201.1| GD14864 [Drosophila simulans]
          Length = 187

 Score = 57.6 bits (139), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 36/155 (23%), Positives = 48/155 (30%), Gaps = 40/155 (25%)

Query: 4   GNVFMSCALEEAQNAALRNEIPV---GAVAVL-NNKIISRAGNR--NRELKDV------- 50
            + FM+ +L  A+ +      PV   GA  V   N+I++   N        DV       
Sbjct: 29  DDYFMATSLLSAKRSKD----PVTQVGACIVDSQNRIVAIGYNGFPRNCSDDVFPWSKAP 84

Query: 51  ---------------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARI 95
                            HAE  AI           L    LY TL PC  CA  I    I
Sbjct: 85  KRSKKDDLLEDKKMYVVHAEANAILN----TKGMSLSGTRLYTTLFPCNECAKLIIQVGI 140

Query: 96  RRLYY----GASNPKGGGIENGTQFYTLATCHHSP 126
            ++ Y     A  PK    +       +    H P
Sbjct: 141 SQVLYLSDKYAHKPKYLASKRMLDAVGVEYKRHIP 175


>gi|302772701|ref|XP_002969768.1| hypothetical protein SELMODRAFT_6274 [Selaginella moellendorffii]
 gi|300162279|gb|EFJ28892.1| hypothetical protein SELMODRAFT_6274 [Selaginella moellendorffii]
          Length = 147

 Score = 57.6 bits (139), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 32/127 (25%), Positives = 43/127 (33%), Gaps = 37/127 (29%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKII-SRAGN-------------- 42
           +   + FMS A   AQ +      P   VGA  V  + +I     N              
Sbjct: 2   LSWDDYFMSIAFLSAQRSKD----PIRQVGACLVSQDYVILGIGYNGFPRGCSDDKLPWA 57

Query: 43  RNRELKDVT-------AHAEILAI--RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLA 93
           +     D+         HAE+ AI  R       Q       LYVT+ PC  CA  I  A
Sbjct: 58  KKSRDGDLLKTKYPYVCHAEVNAILNRNHASASGQR------LYVTMFPCNECAKVIIQA 111

Query: 94  RIRRLYY 100
            I  + +
Sbjct: 112 GIAEVIF 118


>gi|121534898|ref|ZP_01666717.1| CMP/dCMP deaminase, zinc-binding [Thermosinus carboxydivorans Nor1]
 gi|121306497|gb|EAX47420.1| CMP/dCMP deaminase, zinc-binding [Thermosinus carboxydivorans Nor1]
          Length = 147

 Score = 57.6 bits (139), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 29/121 (23%), Positives = 39/121 (32%), Gaps = 28/121 (23%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGN--------------------- 42
              FM      A  +       VGAV V + ++++   N                     
Sbjct: 7   DEYFMDITRVVALRSTCLR-RQVGAVIVKDKRLLTSGYNGAPRGLAHCEDVGCLRDTYHV 65

Query: 43  ---RNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLY 99
                 EL     HAE  AI      L    +    LY T +PC+ C   I  A IRR+ 
Sbjct: 66  PSGERHELCRG-MHAEQNAIVQAA--LYGVAIEGATLYCTHQPCSACTKMIINAGIRRIV 122

Query: 100 Y 100
           Y
Sbjct: 123 Y 123


>gi|56696631|ref|YP_166992.1| riboflavin biosynthesis protein RibD [Ruegeria pomeroyi DSS-3]
 gi|56678368|gb|AAV95034.1| riboflavin biosynthesis protein RibD [Ruegeria pomeroyi DSS-3]
          Length = 364

 Score = 57.6 bits (139), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 33/153 (21%), Positives = 52/153 (33%), Gaps = 25/153 (16%)

Query: 3   KGNVFMSCALEEAQNAALRN----EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
               +M+ AL   +    +        VG V V   +I+ R   +         HAE++ 
Sbjct: 4   SDARYMALALSLGRRG--QGVCWPNPAVGCVIVNEGRIVGRGWTQPGGR----PHAEVV- 56

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
                   +         YVTLEPC        CA A+  A + R+     +       N
Sbjct: 57  ----ALAQAGGAARGATAYVTLEPCAHHGKTPPCAEALIAAGVARVVAAIEDCDPRVAGN 112

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
           G +    A      E+  GI E  + + +  FF
Sbjct: 113 GFEMLRRAG----IEVSVGIGEDAAARDLAGFF 141


>gi|85077663|ref|XP_956039.1| hypothetical protein NCU01725 [Neurospora crassa OR74A]
 gi|8218247|emb|CAB92648.1| conserved hypothetical protein [Neurospora crassa]
 gi|28917081|gb|EAA26803.1| conserved hypothetical protein [Neurospora crassa OR74A]
          Length = 415

 Score = 57.6 bits (139), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 34/173 (19%), Positives = 62/173 (35%), Gaps = 56/173 (32%)

Query: 6   VFMSCALEEAQN--AALRNEIPVGAVAVL---NNKI--ISRAGNRNRE-------LKDVT 51
           ++M+ A + A+   AA   E P+GA  V     NK+  ++ A +             +  
Sbjct: 202 IWMTLAHQVAEQTQAAGHGE-PMGACIVQREEGNKVTLVALAADARWRCQGKTGCTGNPM 260

Query: 52  AHAEILAIRMGCRIL-----------SQEILP---------------------------- 72
           AH+ + AI M  + L              IL                             
Sbjct: 261 AHSVLRAISMVAQKLVRAENKRTDTFQTPILEFEAFQDKPLLDDEQKVFEIDHPSPDGYL 320

Query: 73  --EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123
              +++Y+T EPC MC+ AI  +R+ ++ +    P  GG+    +     + +
Sbjct: 321 CHGLEMYLTHEPCVMCSMAILHSRMGKVVFRHRMPLTGGLCAENRGSDHPSLN 373


>gi|149021461|gb|EDL78924.1| similar to 6030466N05Rik protein, isoform CRA_b [Rattus norvegicus]
          Length = 175

 Score = 57.6 bits (139), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 31/113 (27%), Positives = 38/113 (33%), Gaps = 31/113 (27%)

Query: 5   NVFMSCALEEAQNAALRNEIP---VGAVAVL-NNKIISRAGN-RNRELKD------VTA- 52
             FM+ A   AQ +      P   VGA  V   NKI+    N       D       TA 
Sbjct: 23  EYFMAVAFLSAQRSKD----PSSQVGACIVNTENKIVGIGYNGMPNGCSDDLLPWRRTAE 78

Query: 53  -----------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLAR 94
                      HAE+ AI       +   +    +YV L PC  CA  I  A 
Sbjct: 79  NKLDTKYPYVCHAELNAIMN----KNSADVKGCSMYVALFPCNECAKLIIQAG 127


>gi|289621391|emb|CBI52174.1| unnamed protein product [Sordaria macrospora]
          Length = 157

 Score = 57.6 bits (139), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 31/144 (21%), Positives = 53/144 (36%), Gaps = 30/144 (20%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           ++ A EE + +     IP        +KI           +++    E   ++   R L 
Sbjct: 7   LAIAYEETKKSYEEGGIP--------SKI------TTTSFRNI----ETATLQNAGR-LP 47

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG---ASNPKGGGIENGTQFYTLATCHH 124
                   +Y TL PC MC  AI L +I R+  G      P+ GG E+  +   +     
Sbjct: 48  APTYSSSTIYTTLSPCDMCTGAILLYKIPRVVIGENRTFKPENGGGEDYLRERGVEVVVV 107

Query: 125 SPEIYPGISEQRSRQIIQDFFKER 148
             E          R +++ F +E+
Sbjct: 108 DDE--------GCRGLMERFVREK 123


>gi|114567897|ref|YP_755051.1| ComE operon protein 2 [Syntrophomonas wolfei subsp. wolfei str.
           Goettingen]
 gi|114338832|gb|ABI69680.1| putative ComE operon protein 2 [Syntrophomonas wolfei subsp. wolfei
           str. Goettingen]
          Length = 156

 Score = 57.6 bits (139), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 29/119 (24%), Positives = 38/119 (31%), Gaps = 26/119 (21%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGN--------------RNRELKD 49
              F+  A   A  +       VGAV V N +IIS   N                 E   
Sbjct: 9   DEYFLQLADLVATRSTCLR-RQVGAVLVKNERIISTGYNGAPRGLEHCLDIGCLREEQGI 67

Query: 50  VTAH---------AEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLY 99
            + H         AE  A+             E  +Y T +PC +CA  I  A I R+ 
Sbjct: 68  PSGHRYELCRGVHAEQNALINAAYYGIST--AEAVIYCTNQPCIICARMIINAGIIRIV 124


>gi|260578782|ref|ZP_05846689.1| riboflavin biosynthesis protein RibD [Corynebacterium jeikeium ATCC
           43734]
 gi|258603080|gb|EEW16350.1| riboflavin biosynthesis protein RibD [Corynebacterium jeikeium ATCC
           43734]
          Length = 354

 Score = 57.6 bits (139), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 26/109 (23%), Positives = 39/109 (35%), Gaps = 16/109 (14%)

Query: 25  PVGAVA-VLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83
           PVGAV    + +++ R            AHAE++A++                 VTLEPC
Sbjct: 25  PVGAVIEDSSGQVVGRGF----TQAPGGAHAEVVALQQAGEQARGGR-----AIVTLEPC 75

Query: 84  TM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
                   CA A+  A IRR+ +  ++                   H P
Sbjct: 76  NHTGRTGPCAEALIRAGIRRVDFLFADLNPAAEGGAATLRAAGVEVHGP 124


>gi|58177055|pdb|1VQ2|A Chain A, Crystal Structure Of T4-Bacteriophage Deoxycytidylate
           Deaminase, Mutant R115e
          Length = 193

 Score = 57.6 bits (139), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 2/55 (3%)

Query: 53  HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKG 107
           HAE+ AI       S   +    +YVTL PC  CA AI+ + I++L Y  +  K 
Sbjct: 104 HAELNAILFAAENGSS--IEGATMYVTLSPCPDCAKAIAQSGIKKLVYCETYDKN 156


>gi|195495983|ref|XP_002095501.1| GE19654 [Drosophila yakuba]
 gi|194181602|gb|EDW95213.1| GE19654 [Drosophila yakuba]
          Length = 199

 Score = 57.2 bits (138), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 31/125 (24%), Positives = 42/125 (33%), Gaps = 36/125 (28%)

Query: 4   GNVFMSCALEEAQNAALRNEIPV---GAVAVL-NNKIISRAGNR--NRELKDV------- 50
            + FM+ +L  A+ +      PV   GA  V   N+I++   N        DV       
Sbjct: 25  DDYFMATSLLSAKRSKD----PVTQVGACIVDSQNRIVAIGYNGFPRNCSDDVFPWSKAK 80

Query: 51  ---------------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARI 95
                            HAE  AI       +   L    LY TL PC  CA  I    I
Sbjct: 81  KGAQDFDPLEDKKMYVVHAEANAILN----TNGMSLTGTRLYTTLFPCNECAKLIIQVGI 136

Query: 96  RRLYY 100
            ++ Y
Sbjct: 137 SQVLY 141


>gi|284929670|ref|YP_003422192.1| deoxycytidylate deaminase [cyanobacterium UCYN-A]
 gi|284810114|gb|ADB95811.1| deoxycytidylate deaminase [cyanobacterium UCYN-A]
          Length = 184

 Score = 57.2 bits (138), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 29/125 (23%), Positives = 40/125 (32%), Gaps = 36/125 (28%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
              FM  A   A  +      PVGAV V + +++S   N        ++H     I  G 
Sbjct: 12  NEYFMMMAKLAATRSTCLA-FPVGAVIVKDKRVLSTGYNGPPAN---SSH----CISQGV 63

Query: 64  RILS------QEILP----------------------EVDLYVTLEPCTMCAAAISLARI 95
                        LP                         +YVTLEPC  C   I  A I
Sbjct: 64  CYPGLESCISSSNLPSRAVHAEANAIAQAAKYRISTNNSTIYVTLEPCISCLKLIISAGI 123

Query: 96  RRLYY 100
           + ++Y
Sbjct: 124 KEVFY 128


>gi|303239763|ref|ZP_07326287.1| CMP/dCMP deaminase zinc-binding [Acetivibrio cellulolyticus CD2]
 gi|302592700|gb|EFL62424.1| CMP/dCMP deaminase zinc-binding [Acetivibrio cellulolyticus CD2]
          Length = 148

 Score = 57.2 bits (138), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 23/99 (23%), Positives = 36/99 (36%), Gaps = 27/99 (27%)

Query: 26  VGAVAVLNNKIISRAGN------------------------RNRELKDVTAHAEILAIRM 61
           VGA+   + +I++   N                           EL     HAE  AI  
Sbjct: 27  VGALIAKDKRILATGYNGAPMGCKHCDEIGCLREKMNVPSGERHELCRAI-HAEQNAIVQ 85

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
                S   + +  LYVT +PC +CA     A I+++ +
Sbjct: 86  AA--YSGTSVKDGTLYVTNQPCVLCAKMAINAGIKKIVF 122


>gi|258405542|ref|YP_003198284.1| CMP/dCMP deaminase zinc-binding [Desulfohalobium retbaense DSM
           5692]
 gi|257797769|gb|ACV68706.1| CMP/dCMP deaminase zinc-binding protein [Desulfohalobium retbaense
           DSM 5692]
          Length = 153

 Score = 57.2 bits (138), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 24/126 (19%), Positives = 45/126 (35%), Gaps = 26/126 (20%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGN--------------RNRELKDV 50
           + FM  A   A+ +       VGA+AV +N+I++   N                 ++   
Sbjct: 9   DYFMRIAHLVAERSTCLRRR-VGAIAVKDNRILATGYNGAPAGLAHCLDIGCLREKMGIP 67

Query: 51  TA---------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
           +          HAE   I      +    L   +++ T +PC +C   +  + I  +Y+ 
Sbjct: 68  SGERHELCRGLHAEQNVIIQAA--VHGIPLKGAEIFCTTQPCLICTKMLINSNITAIYFA 125

Query: 102 ASNPKG 107
              P  
Sbjct: 126 EGYPDA 131


>gi|47214735|emb|CAG01270.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 114

 Score = 57.2 bits (138), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 31/113 (27%), Positives = 39/113 (34%), Gaps = 31/113 (27%)

Query: 5   NVFMSCALEEAQNAALRNEIP---VGAVAV-LNNKIISRAGN--------------RNRE 46
             FM+ A   AQ +      P   VGA  V   NKI+    N              R+ E
Sbjct: 10  EYFMAVAFLSAQRSKD----PSSQVGACIVNPENKIVGIGYNGMPNGCDDDLLPWSRSAE 65

Query: 47  LKDVT-----AHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLAR 94
               T      HAE+ AI       +   +    +YV L PC  CA  I  A 
Sbjct: 66  DHLDTKYPYVCHAELNAIMN----KNSADVKGCTMYVALFPCNECAKLIIQAG 114


>gi|226357352|ref|YP_002787092.1| dCMP deaminase (Deoxycytidylate deaminase) [Deinococcus deserti
           VCD115]
 gi|226319342|gb|ACO47338.1| putative dCMP deaminase (Deoxycytidylate deaminase) [Deinococcus
           deserti VCD115]
          Length = 142

 Score = 57.2 bits (138), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 20/91 (21%), Positives = 34/91 (37%), Gaps = 18/91 (19%)

Query: 26  VGAVAV-LNNKIISRAGNRNR-----------ELKDVTAHAEILAIRMGCRILSQEILPE 73
           VGA  +  +++++    N              +      HAE+ A+              
Sbjct: 28  VGACILDRHHRVVGVGYNGRAAGEPNERESLDQGHSGFIHAEVNALLAA-----NWNGEG 82

Query: 74  VDLYVTLEPCTMCAAAISLA-RIRRLYYGAS 103
             LYVT EPC  CA  I  + R+ R+ + + 
Sbjct: 83  HTLYVTHEPCATCARLIVNSRRVGRVAFASP 113


>gi|120600291|ref|YP_964865.1| CMP/dCMP deaminase, zinc-binding [Shewanella sp. W3-18-1]
 gi|120560384|gb|ABM26311.1| CMP/dCMP deaminase, zinc-binding [Shewanella sp. W3-18-1]
          Length = 497

 Score = 57.2 bits (138), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 16/71 (22%), Positives = 27/71 (38%), Gaps = 2/71 (2%)

Query: 53  HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN 112
           HAE+ A+    R      +    LY T  PC  CA  I  A + ++ +    PK    + 
Sbjct: 345 HAEMEALMSAARTGIS--VLGATLYTTTFPCHNCAKHIVAAGVGKVVFIEPYPKSFATKL 402

Query: 113 GTQFYTLATCH 123
            +    +   +
Sbjct: 403 HSDSIKVDRFN 413


>gi|242058805|ref|XP_002458548.1| hypothetical protein SORBIDRAFT_03g035540 [Sorghum bicolor]
 gi|241930523|gb|EES03668.1| hypothetical protein SORBIDRAFT_03g035540 [Sorghum bicolor]
          Length = 228

 Score = 57.2 bits (138), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 27/125 (21%), Positives = 40/125 (32%), Gaps = 33/125 (26%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKII-SRAGN-------------- 42
           +   + FM+ A   A+ +      P   VGA  V    II     N              
Sbjct: 68  ISWDDYFMAIAFLSAERSKD----PNRQVGACLVSQEGIILGIGYNGFPRGCSDDKLPWA 123

Query: 43  RNRELKDVT-------AHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARI 95
           +     +          HAE+ AI       +        LYVT+ PC  CA  I  + +
Sbjct: 124 KKSANGNPLETKFPYVVHAEVNAILNTNHASA----AGQKLYVTMFPCNECAKIIIQSGV 179

Query: 96  RRLYY 100
             + Y
Sbjct: 180 SEVIY 184


>gi|220920582|ref|YP_002495883.1| CMP/dCMP deaminase [Methylobacterium nodulans ORS 2060]
 gi|219945188|gb|ACL55580.1| CMP/dCMP deaminase zinc-binding [Methylobacterium nodulans ORS
           2060]
          Length = 570

 Score = 57.2 bits (138), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 2/54 (3%)

Query: 53  HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPK 106
           HAEILAI    R+       +  LY T  PC MCA  I  + ++++ +    PK
Sbjct: 387 HAEILAISDAARLGRSTH--DTVLYCTTFPCHMCAKHIVASGVKKVVFLEPYPK 438


>gi|328767193|gb|EGF77244.1| hypothetical protein BATDEDRAFT_14312 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 353

 Score = 57.2 bits (138), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 24/125 (19%), Positives = 36/125 (28%), Gaps = 35/125 (28%)

Query: 4   GNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGN---------------RNRE 46
              FM      A+ +    R    VG + V N ++I+   N               R   
Sbjct: 196 DTYFMELCDLAARRSNCMKRR---VGCILVNNRRVIATGYNGTPRGIRNCNDGGCQRCNS 252

Query: 47  LKDV--------TAHAEILAIRMGCRILSQEILPE---VDLYVTLEPCTMCAAAISLARI 95
                         HAE  A+    R    E +       LY    PC  CA  I    +
Sbjct: 253 NASCGSQLDTCLCLHAEENALLEAGR----ERISGSGHTTLYCNTCPCLGCAKKIVQVGV 308

Query: 96  RRLYY 100
           + + +
Sbjct: 309 KEVVF 313


>gi|154297636|ref|XP_001549244.1| hypothetical protein BC1G_12663 [Botryotinia fuckeliana B05.10]
 gi|150858486|gb|EDN33678.1| hypothetical protein BC1G_12663 [Botryotinia fuckeliana B05.10]
          Length = 82

 Score = 57.2 bits (138), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 13/54 (24%), Positives = 23/54 (42%), Gaps = 2/54 (3%)

Query: 1  MKKGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAH 53
          +     F + A+EEA+       +P+GA  V  + K++ R  N   +      H
Sbjct: 4  LSDQEAF-AIAVEEAKIGYEEGGVPIGAALVSRDGKLLGRGHNMRVQKGSAIHH 56


>gi|297543681|ref|YP_003675983.1| CMP/dCMP deaminase zinc-binding protein [Thermoanaerobacter
           mathranii subsp. mathranii str. A3]
 gi|296841456|gb|ADH59972.1| CMP/dCMP deaminase zinc-binding protein [Thermoanaerobacter
           mathranii subsp. mathranii str. A3]
          Length = 147

 Score = 57.2 bits (138), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 25/98 (25%), Positives = 34/98 (34%), Gaps = 25/98 (25%)

Query: 26  VGAVAVLNNKIISRAGN--------------RNRELKDVTA---------HAEILAIRMG 62
           VGA+ V++  IIS   N                 +L   +          HAE  AI   
Sbjct: 27  VGAILVVDKHIISTGYNGPPTGLAHCEETGCLRDQLGIPSGERPELCRGVHAEQNAIIQA 86

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
              L         LYV   PC MCA  +    ++R+ Y
Sbjct: 87  A--LHGVSTKGATLYVNASPCVMCAKMLINTGVKRIVY 122


>gi|258625859|ref|ZP_05720734.1| deoxycytidylate deaminase-related protein [Vibrio mimicus VM603]
 gi|258581823|gb|EEW06697.1| deoxycytidylate deaminase-related protein [Vibrio mimicus VM603]
          Length = 517

 Score = 57.2 bits (138), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 22/71 (30%), Positives = 26/71 (36%), Gaps = 5/71 (7%)

Query: 53  HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN 112
           HAE+ AI    R      +    LY T  PC  CA  I  A I R+ Y     K      
Sbjct: 371 HAEMDAIISLARRSGSNSV-GKTLYCTTYPCHNCARHIVAAGIERVVYIEPYEKSLA--- 426

Query: 113 GTQFYTLATCH 123
               +  A CH
Sbjct: 427 -MDLHDDAICH 436


>gi|119188441|ref|XP_001244827.1| hypothetical protein CIMG_04268 [Coccidioides immitis RS]
          Length = 160

 Score = 57.2 bits (138), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 22/98 (22%), Positives = 30/98 (30%), Gaps = 26/98 (26%)

Query: 26  VGAVAVLNNKIISRAGN--RNRELK------------DVTA---------HAEILAIRMG 62
           VG V V + +++S   N                      TA         HAE  A+   
Sbjct: 18  VGCVLVKDRRVMSTGYNGTARNTRNCNQGGCPRCNLVQGTAQALSTCLCLHAEENALLEA 77

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
            R    E      LY    PC  C+  I+   I  + Y
Sbjct: 78  GRERIGE---GCILYCNTCPCLTCSVKIAQLGISEVVY 112


>gi|294939942|ref|XP_002782608.1| Deoxycytidylate deaminase, putative [Perkinsus marinus ATCC 50983]
 gi|239894442|gb|EER14403.1| Deoxycytidylate deaminase, putative [Perkinsus marinus ATCC 50983]
          Length = 130

 Score = 56.8 bits (137), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 26/114 (22%), Positives = 36/114 (31%), Gaps = 34/114 (29%)

Query: 5   NVFMSCALEEAQNAALRNEIP---VGAVAVLNNK-IISRAGN----RNRELKDVTA---- 52
             FM+ A   A  +      P   VGAV V  +K ++    N          D       
Sbjct: 25  EYFMALAHVTAMRSKD----PSTQVGAVIVNPDKKVVGIGYNGFPSMGEIDNDALLNWGK 80

Query: 53  --------------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISL 92
                         HAE+ AI       +Q  + +  +Y TL PC  C   I  
Sbjct: 81  KGDKPIDSKYWFVCHAEMNAIMN----KNQHDIRDCAIYTTLFPCHECTKLILQ 130


>gi|328773882|gb|EGF83919.1| hypothetical protein BATDEDRAFT_84642 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 594

 Score = 56.8 bits (137), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 22/77 (28%), Positives = 34/77 (44%), Gaps = 13/77 (16%)

Query: 25  PVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83
           P G V V   +++I+          +  AHA + AI     +         D+YV+  PC
Sbjct: 73  PTGCVLVDTRDRVIAL-----ESTGE--AHAIVRAI-----LRCPYDPRGCDIYVSRFPC 120

Query: 84  TMCAAAISLARIRRLYY 100
            MC   +  A IR++YY
Sbjct: 121 AMCTKVMVQAGIRKIYY 137


>gi|329939288|ref|ZP_08288624.1| putative cytidine and deoxycytidylate deaminase [Streptomyces
           griseoaurantiacus M045]
 gi|329301517|gb|EGG45411.1| putative cytidine and deoxycytidylate deaminase [Streptomyces
           griseoaurantiacus M045]
          Length = 294

 Score = 56.8 bits (137), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 32/119 (26%), Positives = 44/119 (36%), Gaps = 24/119 (20%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNREL-------KDV------ 50
              FM+ AL EA  ++      VGAVA  + +++  A N +           D       
Sbjct: 140 DRRFMAGALREAGRSSDWW-RQVGAVAARDGEVLRVAHNHHHPTEYAPYIDGDPRNEFSR 198

Query: 51  -------TA-HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
                  TA HAE  A  +         L   DLYV+  PC  CA  +  A  R  Y+ 
Sbjct: 199 GVRTDLSTAIHAE--ASLVAGAAGEGMSLAGADLYVSTFPCPACARLVVEAGFRACYFA 255


>gi|257460844|ref|ZP_05625945.1| riboflavin biosynthesis protein RibD [Campylobacter gracilis
           RM3268]
 gi|257442175|gb|EEV17317.1| riboflavin biosynthesis protein RibD [Campylobacter gracilis
           RM3268]
          Length = 407

 Score = 56.8 bits (137), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 31/198 (15%), Positives = 54/198 (27%), Gaps = 61/198 (30%)

Query: 3   KGNVFMSCALEEAQN--AALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAI 59
               +M  AL  A    A       VG V +    +++    ++         HAE  A+
Sbjct: 2   NDEFYMDLALRAAWRYQALTLPNPAVGCVLLDRGGRVLGIGAHKKAGFL----HAEANAV 57

Query: 60  RMG-CRILSQE------------------------------------------ILPEVDL 76
               C +                                              +L     
Sbjct: 58  FAALCDLDVNFAQDFACEYAREFGVKFQNLEALKSALLQPSFAYDFILNRHGGLLRGACA 117

Query: 77  YVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYP 130
           YVTLEPC        CA  ++   + R+  GA +        G +     +     EI  
Sbjct: 118 YVTLEPCAHRGKTPSCAELLAQLGLSRVVIGARDTNAQAAG-GAEILRRGS----IEIKF 172

Query: 131 GISEQRSRQIIQDFFKER 148
            +    + ++ + F+  R
Sbjct: 173 DVCHAAAEELAEPFYLAR 190


>gi|322699644|gb|EFY91404.1| putative dCMP deaminase [Metarhizium acridum CQMa 102]
          Length = 379

 Score = 56.8 bits (137), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 29/138 (21%), Positives = 43/138 (31%), Gaps = 35/138 (25%)

Query: 4   GNVFMSCALEEAQNA--ALRNEIPVGAVAV-LNNKIISRAGN---------------RNR 45
              FM+ A   AQ +    R    VG V V    ++IS   N               R  
Sbjct: 225 DTYFMALASLAAQRSNCMKRR---VGCVLVGRERRVISTGYNGTPRGIRNCADGGCPRCN 281

Query: 46  ELKD-----VTA---HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRR 97
           E         T    HAE  A+    R   ++      LY    PC  C+  I    I  
Sbjct: 282 EGNSSGVGLATCLCIHAEENALLEAGRERIRD---GSVLYCDTCPCLTCSIKICQVGISE 338

Query: 98  LYYG---ASNPKGGGIEN 112
           + Y    + + +   + +
Sbjct: 339 VVYAHGYSMDKEAAAVFS 356


>gi|300088321|ref|YP_003758843.1| CMP/dCMP deaminase zinc-binding protein [Dehalogenimonas
           lykanthroporepellens BL-DC-9]
 gi|299528054|gb|ADJ26522.1| CMP/dCMP deaminase zinc-binding protein [Dehalogenimonas
           lykanthroporepellens BL-DC-9]
          Length = 157

 Score = 56.8 bits (137), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 28/120 (23%), Positives = 42/120 (35%), Gaps = 26/120 (21%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGN--------------RNRELK 48
             + F+  A   A+ +  R    VGAVAV N  I++   N                 E  
Sbjct: 6   TDDYFLKIAAVVAERSTCRRRH-VGAVAVKNKHILTTGYNGAPAGVPDCLELGCLRDENN 64

Query: 49  DVTA---------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLY 99
             +          HAE   I    +      L    +Y T  PC +CA  ++ ARI++  
Sbjct: 65  IPSGTRHEICRAVHAEQNVIIQAAQHGVN--LEGSTVYCTHTPCILCAKMLANARIKKFV 122


>gi|118197658|ref|YP_874051.1| deoxycytidylate deaminase [Thermus phage phiYS40]
 gi|116266349|gb|ABJ91432.1| deoxycytidylate deaminase [Thermus phage phiYS40]
          Length = 142

 Score = 56.8 bits (137), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 29/114 (25%), Positives = 45/114 (39%), Gaps = 24/114 (21%)

Query: 5   NVFMSCALEEAQNAALRNEIP---VGAVAVLNNK-IISRAGN--------RNRELKDV-- 50
           + +    +E A+  A  ++ P   VGAV V N + I+S   N            L +   
Sbjct: 2   DKWHKRFIELAKTIAQYSKDPRTKVGAVIVDNERRIVSMGYNGFPRKVLDLEERLNNRKE 61

Query: 51  ----TAHAEILAIRMGCRILSQEILPEVDLYV-TLEPCTMCAAAISLARIRRLY 99
                 HAE+ AI    R      +    +YV    PC  CA AI  + I+++ 
Sbjct: 62  KLKYVVHAELNAILNAKR-----DIEGTTIYVYPYFPCNECAKAIIQSGIKKVI 110


>gi|304373353|ref|YP_003856562.1| deoxycytidylate deaminase [Mycoplasma hyorhinis HUB-1]
 gi|304309544|gb|ADM22024.1| deoxycytidylate deaminase [Mycoplasma hyorhinis HUB-1]
          Length = 162

 Score = 56.8 bits (137), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 33/128 (25%), Positives = 51/128 (39%), Gaps = 30/128 (23%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAV-LNNKIISRAGNRNRELKDV------ 50
           +     F    L  A+ +A R++ P   VGA  V   N+++    N   +  DV      
Sbjct: 10  INWNEYF----LALAKISAKRSKDPNTQVGACIVSKQNRVLGIGYNGMPKGNDVDFPWSK 65

Query: 51  ------------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98
                         HAEI AI      L+   + +  LYV+L PC+ CA  I+   I  +
Sbjct: 66  DSNKASEVKYSYVIHAEINAILNSILPLNT--VEDAKLYVSLFPCSNCAKVIAQTGITTI 123

Query: 99  YYGASNPK 106
           Y+   + K
Sbjct: 124 YF--DDDK 129


>gi|325068553|ref|ZP_08127226.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase
           /5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Actinomyces oris K20]
          Length = 111

 Score = 56.8 bits (137), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 26/109 (23%), Positives = 41/109 (37%), Gaps = 21/109 (19%)

Query: 8   MSCALEEAQNAALRNEIP-----VGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRM 61
           M  AL   + AA  +  P     VG V +  +  +++   +R       TAHAE+ A  +
Sbjct: 12  MQRAL---RAAASPDAPPGPNPRVGCVILSPDGDVLAEGHHR----GAGTAHAEVDA--L 62

Query: 62  GCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASN 104
                +          VTLEPC        C  A+  A +  + Y   +
Sbjct: 63  ANLAAAGASARGTTAVVTLEPCNHQSRTGPCVQALLDAGVAEVIYAQDD 111


>gi|325845138|ref|ZP_08168447.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Turicibacter sp. HGF1]
 gi|325488803|gb|EGC91203.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Turicibacter sp. HGF1]
          Length = 157

 Score = 56.8 bits (137), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 30/122 (24%), Positives = 40/122 (32%), Gaps = 31/122 (25%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAV-LNNKIISRAGN-------------- 42
           +     FM  AL  +  +      P   VGA  V   ++I+    N              
Sbjct: 6   LSWDEYFMGIALLSSMRSKD----PQTQVGACIVNEEHRIVGIGYNGFPHGCKDEEFPWE 61

Query: 43  ---RNRELKDV-TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98
                   K     HAE  AI     + S   L    LYV+L PC  CA  I  + I  +
Sbjct: 62  REGEFINTKYPYVVHAEQNAI-----LNSTTSLKHCRLYVSLFPCHECAKYIIQSGINEI 116

Query: 99  YY 100
            Y
Sbjct: 117 VY 118


>gi|293377500|ref|ZP_06623696.1| ComE operon protein 2 [Enterococcus faecium PC4.1]
 gi|292643869|gb|EFF61983.1| ComE operon protein 2 [Enterococcus faecium PC4.1]
          Length = 148

 Score = 56.8 bits (137), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 23/90 (25%), Positives = 33/90 (36%), Gaps = 17/90 (18%)

Query: 26  VGAVAVLNNKIISRAGNR---------------NRELKDVTAHAEILAIRMGCRILSQEI 70
           VGA  V   +II+   N                       T HAE+ A+   C  L    
Sbjct: 18  VGATLVREKRIIAGGYNGAVSGDVHCIDEGCYIVDGHCLRTIHAEMNALLQ-CAKLGIPT 76

Query: 71  LPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
               ++YVT  PC  C  A+  A ++ + Y
Sbjct: 77  -EGSEIYVTHFPCLACTKALLQAGVKGINY 105


>gi|85858030|ref|YP_460232.1| deoxycytidylate deaminase [Syntrophus aciditrophicus SB]
 gi|85721121|gb|ABC76064.1| deoxycytidylate deaminase [Syntrophus aciditrophicus SB]
          Length = 150

 Score = 56.8 bits (137), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 30/123 (24%), Positives = 43/123 (34%), Gaps = 30/123 (24%)

Query: 2   KKGNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGN--------------RNR 45
           +    F+  A   A+ +    RN   VGAV V   +I+S   N                 
Sbjct: 9   EWDVYFLDIAALVARRSTCLRRN---VGAVLVRERRILSTGYNGAPSGLRHCLDIGCLRD 65

Query: 46  ELKDVTA---------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIR 96
           +L+  +          HAE  AI      L    +    LY T +PC +CA  I  A I 
Sbjct: 66  QLQVPSGERHELCRGLHAEQNAIIQAA--LHGVGIAGATLYCTNQPCVICAKMIINAGID 123

Query: 97  RLY 99
            + 
Sbjct: 124 SVV 126


>gi|159028962|emb|CAO87423.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
          Length = 178

 Score = 56.8 bits (137), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 29/124 (23%), Positives = 43/124 (34%), Gaps = 28/124 (22%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHA--------- 54
              F+  A   A  +      PVGAV V + ++++   N        T H          
Sbjct: 12  DEYFLMIAKLAATRSTCLA-FPVGAVIVKDRQVLATGYN---GSPSGTVHCTAQGFCYPG 67

Query: 55  --------EI--LAIRMGCRILSQEIL-----PEVDLYVTLEPCTMCAAAISLARIRRLY 99
                   EI   AI      ++Q            +YVTLEPC  C   I  + I+ ++
Sbjct: 68  LGTCRESGEIPSRAIHAEANAIAQAAKHGISTQGASIYVTLEPCISCLKLIISSGIKEVF 127

Query: 100 YGAS 103
           Y A 
Sbjct: 128 YEAD 131


>gi|163784632|ref|ZP_02179466.1| riboflavin specific deaminase [Hydrogenivirga sp. 128-5-R1-1]
 gi|159880100|gb|EDP73770.1| riboflavin specific deaminase [Hydrogenivirga sp. 128-5-R1-1]
          Length = 279

 Score = 56.8 bits (137), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 15/66 (22%), Positives = 30/66 (45%), Gaps = 7/66 (10%)

Query: 87  AAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF- 145
             AI   +I+++     +P       G +        H  E+  G+ E +++++ +DFF 
Sbjct: 1   TNAIIENKIKKVVVATLDPNPLVAGKGIKLLEE----HGVEVITGVLEDKAKKLNEDFFV 56

Query: 146 --KERR 149
             KE+R
Sbjct: 57  YIKEKR 62


>gi|225175841|ref|ZP_03729834.1| CMP/dCMP deaminase zinc-binding [Dethiobacter alkaliphilus AHT 1]
 gi|225168765|gb|EEG77566.1| CMP/dCMP deaminase zinc-binding [Dethiobacter alkaliphilus AHT 1]
          Length = 166

 Score = 56.8 bits (137), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 21/98 (21%), Positives = 34/98 (34%), Gaps = 25/98 (25%)

Query: 26  VGAVAVLNNKIISRAGNR--------------NRELKDVTA---------HAEILAIRMG 62
           VGA+ + + +I++   N                 + +  +          HAE  AI   
Sbjct: 42  VGALIIKDKRILATGYNGAPSGLAHCQDVGCIREQQQVPSGERHELCRALHAEQNAILQA 101

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
              L    +    LY T  PC MCA  I  A ++ +  
Sbjct: 102 A--LYGVSIQHATLYCTTHPCVMCAKMIINAGMKEVVI 137


>gi|120602899|ref|YP_967299.1| CMP/dCMP deaminase, zinc-binding [Desulfovibrio vulgaris DP4]
 gi|120563128|gb|ABM28872.1| CMP/dCMP deaminase, zinc-binding protein [Desulfovibrio vulgaris
           DP4]
          Length = 176

 Score = 56.8 bits (137), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 42/123 (34%), Gaps = 26/123 (21%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGN--------------RNRE 46
           M   + FM      A+ +       VGA+AV + +I++   N                 +
Sbjct: 4   MPWPDYFMQITYLVAERSTCTRRK-VGAIAVKDKRILATGYNGAPSNVAHCLEVGCLREQ 62

Query: 47  LKDVTA---------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRR 97
           L   +          HAE   I           L   ++Y T +PC +C   +    +R 
Sbjct: 63  LGVPSGQRHEICRGLHAEQNVIIQAAIHGVS--LTGSEIYCTTQPCLICTKMLINCGVRA 120

Query: 98  LYY 100
           +YY
Sbjct: 121 VYY 123


>gi|46579613|ref|YP_010421.1| cytidine/deoxycytidylate deaminase family protein [Desulfovibrio
           vulgaris str. Hildenborough]
 gi|46449028|gb|AAS95680.1| cytidine/deoxycytidylate deaminase family protein [Desulfovibrio
           vulgaris str. Hildenborough]
 gi|311233417|gb|ADP86271.1| CMP/dCMP deaminase zinc-binding protein [Desulfovibrio vulgaris
           RCH1]
          Length = 176

 Score = 56.5 bits (136), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 43/123 (34%), Gaps = 26/123 (21%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGN--------------RNRE 46
           M   + FM      A+ +       VGA+AV + +I++   N                 +
Sbjct: 4   MPWPDYFMQITYLVAERSTCTRRK-VGAIAVKDKRILATGYNGAPSNVAHCLEVGCLREQ 62

Query: 47  LKDVTA---------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRR 97
           L   +          HAE   I      +    L   ++Y T +PC +C   +    +R 
Sbjct: 63  LGVPSGQRHEICRGLHAEQNVIIQAA--IHGVSLTGSEIYCTTQPCLICTKMLINCGVRA 120

Query: 98  LYY 100
           +YY
Sbjct: 121 VYY 123


>gi|328954436|ref|YP_004371770.1| CMP/dCMP deaminase zinc-binding protein [Desulfobacca acetoxidans
           DSM 11109]
 gi|328454760|gb|AEB10589.1| CMP/dCMP deaminase zinc-binding protein [Desulfobacca acetoxidans
           DSM 11109]
          Length = 186

 Score = 56.5 bits (136), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 26/131 (19%), Positives = 42/131 (32%), Gaps = 41/131 (31%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGN-----------RNRELKDVTA 52
              FM  A   +  +   N  P GAV V + +I++   N           +         
Sbjct: 6   DEYFMLIAKLVSTRS-TCNSRPTGAVLVKDRQILATGYNGSMPGAPHCTDQTMPDGSPYC 64

Query: 53  HAEILAIRMGCRILSQEILPEV-----------------------DLYVTLEPCTMCAAA 89
           H      R   ++   +                             LYVTLEPC +C   
Sbjct: 65  H------RRALQVADSDKYNFCRASHAEANAIAQAARHGVAIKGASLYVTLEPCYVCLKL 118

Query: 90  ISLARIRRLYY 100
           ++ A+I R+Y+
Sbjct: 119 LATAQIDRVYF 129


>gi|167898152|ref|ZP_02485554.1| riboflavin biosynthesis protein [Burkholderia pseudomallei 7894]
          Length = 90

 Score = 56.5 bits (136), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 21/84 (25%), Positives = 28/84 (33%), Gaps = 11/84 (13%)

Query: 4  GNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
              M+ AL  A+           VG V     + +    +R         HAE+ A+R 
Sbjct: 8  DRTHMAHALRLAEQGLYTTHPNPRVGCVIARGARTLGAGWHRRAGE----PHAEVHALRE 63

Query: 62 GCRILSQEILPEVDLYVTLEPCTM 85
                 E       YVTLEPC  
Sbjct: 64 AG-----ERARGATAYVTLEPCAH 82


>gi|298493071|ref|YP_003723248.1| CMP/dCMP deaminase zinc-binding protein ['Nostoc azollae' 0708]
 gi|298234989|gb|ADI66125.1| CMP/dCMP deaminase zinc-binding protein ['Nostoc azollae' 0708]
          Length = 194

 Score = 56.5 bits (136), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 29/131 (22%), Positives = 42/131 (32%), Gaps = 48/131 (36%)

Query: 4   GNVFMSCALEEAQNAALRNE---IPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
              F    L  A+ AA R+     PVGAV V N ++++   N        +AH       
Sbjct: 17  DEYF----LMLAKLAATRSTCIAFPVGAVIVKNKQVVATGYN---GSPSGSAHC------ 63

Query: 61  MGCRILSQEILPEVD-------------------------------LYVTLEPCTMCAAA 89
              +      L   D                               +YVTLEPC  C   
Sbjct: 64  -TSQGYCYPGLTSCDASKTLPSRAVHAEANAIAQAANYGISTYGASIYVTLEPCLSCLKL 122

Query: 90  ISLARIRRLYY 100
           +  A I+ ++Y
Sbjct: 123 VISAGIKEVFY 133


>gi|67922330|ref|ZP_00515842.1| Cytidine/deoxycytidylate deaminase, zinc-binding region
           [Crocosphaera watsonii WH 8501]
 gi|67855781|gb|EAM51028.1| Cytidine/deoxycytidylate deaminase, zinc-binding region
           [Crocosphaera watsonii WH 8501]
          Length = 189

 Score = 56.5 bits (136), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 29/131 (22%), Positives = 42/131 (32%), Gaps = 48/131 (36%)

Query: 4   GNVFMSCALEEAQNAALRNE---IPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
              F    +  A+ AA R+     PVGAV V + ++++   N        +AH       
Sbjct: 12  HEYF----IMMAKLAATRSTCLAFPVGAVIVKDRQVLATGYN---GSPSGSAHC------ 58

Query: 61  MGCRILSQEILPEVD-------------------------------LYVTLEPCTMCAAA 89
              +      L   D                               +YVTLEPC  C   
Sbjct: 59  -TAQGFCYPGLDSCDSPSGLPSRAIHAEANAIAQAAKHGISTHGASIYVTLEPCLYCLKL 117

Query: 90  ISLARIRRLYY 100
           I  A IR ++Y
Sbjct: 118 IISAGIREVFY 128


>gi|229512710|ref|ZP_04402178.1| hypothetical protein VCB_000353 [Vibrio cholerae TMA 21]
 gi|229350220|gb|EEO15172.1| hypothetical protein VCB_000353 [Vibrio cholerae TMA 21]
          Length = 496

 Score = 56.5 bits (136), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 21/75 (28%), Positives = 30/75 (40%), Gaps = 6/75 (8%)

Query: 53  HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN 112
           HAE+ AI    R        +  LY T  PC  CA  I  + + R+ Y    PK      
Sbjct: 348 HAEMEAILSCARHYIST--KDTTLYCTTFPCHNCAKHIVASGVARVVYVEPYPKSKA--- 402

Query: 113 GTQFYTLATCHHSPE 127
            T F++ +   +  E
Sbjct: 403 -TDFHSDSISFYETE 416


>gi|320537565|ref|ZP_08037503.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Treponema phagedenis F0421]
 gi|320145567|gb|EFW37245.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Treponema phagedenis F0421]
          Length = 165

 Score = 56.5 bits (136), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 25/120 (20%), Positives = 35/120 (29%), Gaps = 27/120 (22%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAG--------------NR----NR 45
              FM      A+ A        G V   +N+I+                  ++      
Sbjct: 14  DEYFMEVCHAIAKRATCDRGR-SGCVIARDNQILVTGYVGSPTGLPHCDEVGHQLKKMQH 72

Query: 46  ELKDVTA------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLY 99
           E   +T       HAE  AI    R      +    LY  + PC  CA  I    I R+ 
Sbjct: 73  EDGSITQHCVRTVHAEQNAICQAARRGIA--INGATLYCKMTPCRTCAMLIINCGIVRVV 130


>gi|166368807|ref|YP_001661080.1| zinc-binding CMP/dCMP deaminase [Microcystis aeruginosa NIES-843]
 gi|166091180|dbj|BAG05888.1| zinc-binding CMP/dCMP deaminase [Microcystis aeruginosa NIES-843]
          Length = 178

 Score = 56.5 bits (136), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 29/124 (23%), Positives = 43/124 (34%), Gaps = 28/124 (22%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHA--------- 54
              F+  A   A  +      PVGAV V + ++++   N        T H          
Sbjct: 12  DEYFLMIAKLAATRSTCLA-FPVGAVIVKDRQVLATGYN---GSPSGTVHCTAQGFCYPG 67

Query: 55  --------EI--LAIRMGCRILSQEIL-----PEVDLYVTLEPCTMCAAAISLARIRRLY 99
                   EI   AI      ++Q            +YVTLEPC  C   I  + I+ ++
Sbjct: 68  LGTCRESGEIPSRAIHAEANAIAQAAKHGISTQGASIYVTLEPCISCLKLIISSGIKEVF 127

Query: 100 YGAS 103
           Y A 
Sbjct: 128 YEAD 131


>gi|91088933|ref|XP_973477.1| PREDICTED: similar to dCMP deaminase [Tribolium castaneum]
 gi|270011568|gb|EFA08016.1| hypothetical protein TcasGA2_TC005605 [Tribolium castaneum]
          Length = 318

 Score = 56.5 bits (136), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 24/90 (26%), Positives = 32/90 (35%), Gaps = 20/90 (22%)

Query: 26  VGAVAV-LNNKIISRAGN--------------RNRELKDVTAHAEILAIRMGCRILSQEI 70
           VGA  V    + I    N                 E      HAE+ AI     + S+  
Sbjct: 184 VGACVVNAQGQAIGWGFNDMPQSHEDFNKYWENREEKLLRVCHAELNAI-----VNSKGS 238

Query: 71  LPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
           L    LY T  PC +CA  I    I+ ++Y
Sbjct: 239 LKNAKLYCTWFPCNICAQLIVNTGIKEVFY 268



 Score = 50.3 bits (120), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 34/123 (27%), Gaps = 36/123 (29%)

Query: 4   GNVFMSCALEEAQNAALRNEIP---VGAVAVL-NNKIISRAGN----------RNRELKD 49
               M   L  A+ +      P   VGA  V   + II  A N                 
Sbjct: 13  DEAIMEHCLSLARKSKD----PKIQVGACVVNTQDMIIGSAFNSPPNGWPGGSLPSTKNL 68

Query: 50  VTAHAEILAIRMGCRILSQEI------------LPEVDLYVTLEPCTMCAAAISLARIRR 97
            + H        G  +   E             L +  LY T  PC   A  I    I++
Sbjct: 69  PSEH------FYGLYVCPTEQIAIANAMAANATLEKCTLYTTHFPCNESAKLIIQTGIKK 122

Query: 98  LYY 100
           + Y
Sbjct: 123 IVY 125


>gi|289805437|ref|ZP_06536066.1| tRNA-specific adenosine deaminase [Salmonella enterica subsp.
           enterica serovar Typhi str. AG3]
          Length = 55

 Score = 56.5 bits (136), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 9/36 (25%), Positives = 14/36 (38%)

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
                    +H  EI  G+       ++ DFF+ RR
Sbjct: 1   MDVLHHPGMNHRVEIIEGVLRDECATLLSDFFRMRR 36


>gi|15807611|ref|NP_296350.1| deoxycytidylate deaminase [Deinococcus radiodurans R1]
 gi|6460460|gb|AAF12167.1|AE002092_5 deoxycytidylate deaminase, putative [Deinococcus radiodurans R1]
          Length = 145

 Score = 56.5 bits (136), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 20/91 (21%), Positives = 35/91 (38%), Gaps = 18/91 (19%)

Query: 26  VGAVAV-LNNKIISRAGNRNR-----------ELKDVTAHAEILAIRMGCRILSQEILPE 73
           VGA  +  +++++    N              +      HAE+ A+              
Sbjct: 28  VGACILDRHHRVVGVGYNGRAAGEPNERESLAQGASGYIHAEVNALLAA-----NWNGEG 82

Query: 74  VDLYVTLEPCTMCAAAISLA-RIRRLYYGAS 103
             LYVT EPC++CA  I  + R+ R+ +   
Sbjct: 83  HTLYVTHEPCSVCARLIVNSRRVGRVVFATP 113


>gi|260902633|ref|ZP_05911028.1| cytidine/deoxycytidylate deaminase family protein [Vibrio
           parahaemolyticus AQ4037]
 gi|308109616|gb|EFO47156.1| cytidine/deoxycytidylate deaminase family protein [Vibrio
           parahaemolyticus AQ4037]
          Length = 518

 Score = 56.5 bits (136), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 24/92 (26%), Positives = 35/92 (38%), Gaps = 12/92 (13%)

Query: 53  HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN 112
           HAE+ AI    R      +    LY T  PC  CA  I  A + R+ Y     K      
Sbjct: 372 HAEMDAIISLARRSGSNSV-GKTLYCTTYPCHNCARHIVAAGVERVVYIEPYEKSLA--- 427

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
               +  A CH         ++  S+ ++Q+F
Sbjct: 428 -MDLHDDAICHID-------NKSPSKLLLQNF 451


>gi|300700836|ref|XP_002994914.1| hypothetical protein NCER_102439 [Nosema ceranae BRL01]
 gi|239602808|gb|EEQ81243.1| hypothetical protein NCER_102439 [Nosema ceranae BRL01]
          Length = 231

 Score = 56.5 bits (136), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 20/102 (19%), Positives = 40/102 (39%), Gaps = 7/102 (6%)

Query: 28  AVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCA 87
            + V  + ++S   N +  L +         +    R     +    D ++  EPC  CA
Sbjct: 131 CLIVKEDVLLSFTYNTDNVLGNGI----FKGVDYVSRKRYGYLCTGFDAFILDEPCLSCA 186

Query: 88  AAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIY 129
            A+   RI R++    N +  G+ +  +F      +H  ++Y
Sbjct: 187 MALLHGRIARVF--CLN-RSEGVFSKDRFNFNKNINHRYDVY 225


>gi|332703476|ref|ZP_08423564.1| CMP/dCMP deaminase, zinc-binding protein [Desulfovibrio africanus
           str. Walvis Bay]
 gi|332553625|gb|EGJ50669.1| CMP/dCMP deaminase, zinc-binding protein [Desulfovibrio africanus
           str. Walvis Bay]
          Length = 152

 Score = 56.1 bits (135), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 22/127 (17%), Positives = 42/127 (33%), Gaps = 30/127 (23%)

Query: 5   NVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGN--------------RNRELK 48
             FM  A   A+ +    R    VGA+AV + +I +   N                 ++ 
Sbjct: 9   EYFMKIAYLVAERSTCLRRK---VGAIAVKDKRIAATGYNGVPSGLAHCEDVGCLREKMG 65

Query: 49  DVTA---------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLY 99
             +          HAE   I           +    +Y T +PC +C   +    ++ ++
Sbjct: 66  IPSGQRHELCRGLHAEQNVIIQAA--THGVDISGASIYCTTQPCLICTKMLINVGVKEIW 123

Query: 100 YGASNPK 106
           +  + P 
Sbjct: 124 FAEAYPD 130


>gi|255030296|ref|ZP_05302247.1| hypothetical protein LmonL_16551 [Listeria monocytogenes LO28]
          Length = 129

 Score = 56.1 bits (135), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 2/51 (3%)

Query: 51  TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
           T HAE+ AI    +  +     + +LYVT  PC  C  +I  A I+++Y+ 
Sbjct: 11  TIHAEMNAILQCAKFGATTD--KAELYVTHFPCLACTKSIIQAGIKKVYFA 59


>gi|225558752|gb|EEH07036.1| conserved hypothetical protein [Ajellomyces capsulatus G186AR]
          Length = 197

 Score = 56.1 bits (135), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 36/156 (23%), Positives = 44/156 (28%), Gaps = 41/156 (26%)

Query: 6   VFMSCALEEAQNAALRNEIP-----VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
            +M  A      A      P      G+V               R   + T   EI AI 
Sbjct: 49  YWMRKA----NKALPDLGSPCPWAAFGSVVTKE----------RRGRVNKTW--EIAAIT 92

Query: 61  MGCRILSQEI-------------LPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNP-- 105
               IL+ +                E  LY   E C MCAAAI  A  +   YG S    
Sbjct: 93  NCTDILTNKHGRFKLTSLEALEAFKEFTLYTNAESCPMCAAAIRWAGFKEYVYGTSMETL 152

Query: 106 -KGGG----IENGTQFYTLATCHHSPEIYPGISEQR 136
            + G     I +   F        S  I  GI    
Sbjct: 153 IRMGWPQIRISSRGVFEHSTGLPSSSNIIGGILMNE 188


>gi|322378922|ref|ZP_08053338.1| Riboflavin-specific deaminase / reductase (RibD) [Helicobacter suis
           HS1]
 gi|321148664|gb|EFX43148.1| Riboflavin-specific deaminase / reductase (RibD) [Helicobacter suis
           HS1]
          Length = 353

 Score = 56.1 bits (135), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 25/173 (14%), Positives = 50/173 (28%), Gaps = 48/173 (27%)

Query: 5   NVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGNRNRELKD----VTAHAEILA 58
            + M   ++ A  +         V  + +          +    L+D     T HAE+ A
Sbjct: 13  EILMRACIQHAYKSQTLALPNPSVACMILDQ-------HHNILALQDHSQANTPHAEVRA 65

Query: 59  IRMGCRIL------------------------SQEILPEVDLYVTLEPC------TMCAA 88
           ++     L                           +  +  L VTLEPC        CAA
Sbjct: 66  LKDAYNKLSPTPFPKEINSKDREQTYQFLSKHHNNLFKDCTLLVTLEPCNHFGKTPPCAA 125

Query: 89  AISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141
            ++  + +++           +                E+  G+ E+  R ++
Sbjct: 126 LLAQIKPKKVIISCLETHKKAMGGLACLKEA-----GIEVITGVLEKEGRALL 173


>gi|322380244|ref|ZP_08054465.1| riboflavin-specific deaminase/reductase [Helicobacter suis HS5]
 gi|321147322|gb|EFX42001.1| riboflavin-specific deaminase/reductase [Helicobacter suis HS5]
          Length = 353

 Score = 56.1 bits (135), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 25/173 (14%), Positives = 50/173 (28%), Gaps = 48/173 (27%)

Query: 5   NVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGNRNRELKD----VTAHAEILA 58
            + M   ++ A  +         V  + +          +    L+D     T HAE+ A
Sbjct: 13  EILMRACIQHAYKSQTLALPNPSVACMILDQ-------HHNILALQDHSQANTPHAEVRA 65

Query: 59  IRMGCRIL------------------------SQEILPEVDLYVTLEPC------TMCAA 88
           ++     L                           +  +  L VTLEPC        CAA
Sbjct: 66  LKDAYNKLSPTPFPKEINSKDREQTYQFLSKHHNNLFKDCTLLVTLEPCNHFGKTPPCAA 125

Query: 89  AISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQII 141
            ++  + +++           +                E+  G+ E+  R ++
Sbjct: 126 LLAQIKPKKVIISCLETHKKAMGGLACLKEA-----GIEVITGVLEKEGRALL 173


>gi|312220490|emb|CBY00431.1| similar to CMP/dCMP deaminase zinc-binding [Leptosphaeria maculans]
          Length = 179

 Score = 56.1 bits (135), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/131 (24%), Positives = 47/131 (35%), Gaps = 33/131 (25%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIP----VGAVAV--LNNKIISRAGNRNRELKDVTAHAE 55
                +M  AL++A+ +  +   P    VGA+ V      I+SR      E      HAE
Sbjct: 15  NDHMQYMRLALDQAEKSPPK---PSNFRVGALLVNADTGSILSRGYTLECEGN---THAE 68

Query: 56  ILAIRMGCRILS------QEIL-PEVDLYVTLEPC-------TMCAAAIS-------LAR 94
              +    +          E L P   +Y T+EPC         CA  I         A 
Sbjct: 69  QCCLLKFAQAHDLPEDRVGEALPPNTVIYTTMEPCNLRLSGNLPCADRIIRTKSKDGEAS 128

Query: 95  IRRLYYGASNP 105
           I+++Y G   P
Sbjct: 129 IKKVYIGVKEP 139


>gi|300867695|ref|ZP_07112340.1| CMP/dCMP deaminase, zinc-binding [Oscillatoria sp. PCC 6506]
 gi|300334278|emb|CBN57512.1| CMP/dCMP deaminase, zinc-binding [Oscillatoria sp. PCC 6506]
          Length = 197

 Score = 56.1 bits (135), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 30/133 (22%), Positives = 42/133 (31%), Gaps = 48/133 (36%)

Query: 4   GNVFMSCALEEAQNAALRNE---IPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
              F    L  A+ AA R+     PVGAV V + ++++   N        + H       
Sbjct: 17  DEYF----LMLAKLAATRSTCLAFPVGAVIVKDRQVVATGYN---GSPSGSVHC------ 63

Query: 61  MGCRILSQEILPEVD-------------------------------LYVTLEPCTMCAAA 89
              +      L   D                               +YVTLEPC  C   
Sbjct: 64  -TAQGFCYPGLSSCDASQALPSRAIHAEANAIAQAARHGISTAGGSIYVTLEPCIYCLKL 122

Query: 90  ISLARIRRLYYGA 102
           I  A IR ++Y A
Sbjct: 123 IISAGIREVFYEA 135


>gi|238859563|ref|NP_001154984.1| deoxycytidylate deaminase isoform 2 [Rattus norvegicus]
          Length = 173

 Score = 56.1 bits (135), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 31/112 (27%), Positives = 38/112 (33%), Gaps = 31/112 (27%)

Query: 5   NVFMSCALEEAQNAALRNEIP---VGAVAVL-NNKIISRAGN-RNRELKD------VTA- 52
             FM+ A   AQ +      P   VGA  V   NKI+    N       D       TA 
Sbjct: 23  EYFMAVAFLSAQRSKD----PSSQVGACIVNTENKIVGIGYNGMPNGCSDDLLPWRRTAE 78

Query: 53  -----------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLA 93
                      HAE+ AI       +   +    +YV L PC  CA  I  A
Sbjct: 79  NKLDTKYPYVCHAELNAIMN----KNSADVKGCSMYVALFPCNECAKLIIQA 126


>gi|115746630|ref|XP_785961.2| PREDICTED: similar to DCMP deaminase, partial [Strongylocentrotus
           purpuratus]
 gi|115963430|ref|XP_001194861.1| PREDICTED: similar to DCMP deaminase, partial [Strongylocentrotus
           purpuratus]
          Length = 122

 Score = 56.1 bits (135), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 24/95 (25%), Positives = 34/95 (35%), Gaps = 24/95 (25%)

Query: 26  VGAVAVLN-NKIISRAGN--------------RNR----ELKDV-TAHAEILAIRMGCRI 65
           VGA  V + NKI+    N              R      E K     HAE+ A+      
Sbjct: 1   VGACIVNDENKIVGIGYNGMPRGCSDEALPWQRKNDDWLETKIPYVCHAEMNAVMN---- 56

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
            +   +    +YV L PC  C   I  + I+ + Y
Sbjct: 57  KNCASVKGCTIYVALFPCNECTKVIMQSGIKEVVY 91


>gi|87311170|ref|ZP_01093293.1| probable Cytidine deaminase [Blastopirellula marina DSM 3645]
 gi|87286078|gb|EAQ77989.1| probable Cytidine deaminase [Blastopirellula marina DSM 3645]
          Length = 500

 Score = 56.1 bits (135), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 19/70 (27%), Positives = 26/70 (37%), Gaps = 6/70 (8%)

Query: 53  HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN 112
           HAE+ A+    R        E  LY T  PC  CA  I  A I+R+ +     K      
Sbjct: 349 HAEMDALTSCARNHLSP--KEATLYCTTFPCHNCAKHILAAGIKRVVFIEPYEKSKA--- 403

Query: 113 GTQFYTLATC 122
              F+  +  
Sbjct: 404 -FDFHQDSVL 412


>gi|284161514|ref|YP_003400137.1| CMP/dCMP deaminase zinc-binding protein [Archaeoglobus profundus
           DSM 5631]
 gi|284011511|gb|ADB57464.1| CMP/dCMP deaminase zinc-binding protein [Archaeoglobus profundus
           DSM 5631]
          Length = 563

 Score = 56.1 bits (135), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 2/49 (4%)

Query: 53  HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
           HAE  AI    +      +    +Y T  PC  CA  I  A I+++ YG
Sbjct: 486 HAEQNAIIQAAKFGIC--IDGATMYTTHCPCITCAKMIINAGIKKVVYG 532



 Score = 35.3 bits (81), Expect = 2.6,   Method: Composition-based stats.
 Identities = 9/35 (25%), Positives = 18/35 (51%), Gaps = 1/35 (2%)

Query: 8  MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGN 42
          M  AL  A+ +    +  VGA+ + + +I++   N
Sbjct: 1  MELALVVAKRSTCLRQK-VGAIIIKDKRILATGYN 34


>gi|260806557|ref|XP_002598150.1| hypothetical protein BRAFLDRAFT_82934 [Branchiostoma floridae]
 gi|229283422|gb|EEN54162.1| hypothetical protein BRAFLDRAFT_82934 [Branchiostoma floridae]
          Length = 200

 Score = 56.1 bits (135), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 22/95 (23%), Positives = 32/95 (33%), Gaps = 24/95 (25%)

Query: 26  VGAVAV-LNNKIISRAGN------------------RNRELKDV-TAHAEILAIRMGCRI 65
           VGA  V    KI+    N                     + K     HAE+ AI      
Sbjct: 54  VGACIVNSEKKIVGIGYNGMPNGCSDDKLPWSRTAENRLDTKYPYVCHAELNAILN---- 109

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
            +   +    +YV L PC  CA  +  + IR + +
Sbjct: 110 KNSADVKGCTMYVALFPCNECAKLVIQSGIREIVF 144


>gi|308801951|ref|XP_003078289.1| Scamp4 protein (ISS) [Ostreococcus tauri]
 gi|116056740|emb|CAL53029.1| Scamp4 protein (ISS) [Ostreococcus tauri]
          Length = 363

 Score = 56.1 bits (135), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 14/62 (22%), Positives = 31/62 (50%), Gaps = 3/62 (4%)

Query: 72  PEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI---ENGTQFYTLATCHHSPEI 128
              D+++  EPC MCA A+  +R++R+ + A +   G +       + + + + +H   +
Sbjct: 299 TGYDVFLAREPCVMCAMALVHSRLKRVIFAAPDDVNGALNGPSGSRRLHGVQSLNHHYLV 358

Query: 129 YP 130
           Y 
Sbjct: 359 YS 360


>gi|317485034|ref|ZP_07943916.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Bilophila wadsworthia 3_1_6]
 gi|316923569|gb|EFV44773.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Bilophila wadsworthia 3_1_6]
          Length = 184

 Score = 56.1 bits (135), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 18/78 (23%), Positives = 32/78 (41%), Gaps = 6/78 (7%)

Query: 26  VGAVAVLNNK---IISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEP 82
            GA  +  +    +++     N E      H E+ AI+    +       +     T +P
Sbjct: 32  FGAAVLRKDDLSLVLAE---TNMEAFSPLWHGEVYAIKQFWELQGHPDPKDCIFIATHQP 88

Query: 83  CTMCAAAISLARIRRLYY 100
           C MCA+AI+ +    L+Y
Sbjct: 89  CCMCASAIAWSGFPELFY 106


>gi|295701011|ref|YP_003608904.1| CMP/dCMP deaminase zinc-binding protein [Burkholderia sp. CCGE1002]
 gi|295440224|gb|ADG19393.1| CMP/dCMP deaminase zinc-binding protein [Burkholderia sp. CCGE1002]
          Length = 321

 Score = 56.1 bits (135), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 27/116 (23%), Positives = 39/116 (33%), Gaps = 13/116 (11%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMG 62
             +++S A              V A+ V    +I++    +         HAE  A+ M 
Sbjct: 136 HRLYLSAAFRL--LLGKGGNTGVAALIVSSQGQILAWG--KKNSDH-PLLHAETSALLMY 190

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRR---LYYGASNPKGGGIENGTQ 115
            R L         +Y TL+PC MC AAI           YYG  +P          
Sbjct: 191 GRRLP----AGTRIYSTLKPCKMCRAAIEHFSTENDFLAYYGQDDPTAAASGRVDS 242


>gi|289620316|emb|CBI53174.1| unnamed protein product [Sordaria macrospora]
          Length = 415

 Score = 56.1 bits (135), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 34/173 (19%), Positives = 63/173 (36%), Gaps = 56/173 (32%)

Query: 6   VFMSCALEEAQN--AALRNEIPVGAVAVL---NNKI--ISRAGNRNRELK-------DVT 51
           ++M+ A + A+   AA   E P+GA  V     NK+  ++ A +     +       +  
Sbjct: 202 IWMTLAHQVAEQSQAAGHGE-PMGACIVQREEGNKVTLVALAADARWRCQGKTGCVGNPM 260

Query: 52  AHAEILAIRMGCRIL-----------SQEILP---------------------------- 72
           AH+ + AI M  + L              IL                             
Sbjct: 261 AHSVLRAISMVAQKLVRAENKRTDTFQTPILEFEAFQDKPLLDDEQKVFEIDHPSPDGYL 320

Query: 73  --EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123
              +++Y+T EPC MC+ AI  +R+ ++ +    P  GG+    +     + +
Sbjct: 321 CHGLEMYLTHEPCVMCSMAILHSRMGKVVFRHRMPLTGGLCAENRGSDHPSLN 373


>gi|294886847|ref|XP_002771883.1| deaminase, putative [Perkinsus marinus ATCC 50983]
 gi|239875683|gb|EER03699.1| deaminase, putative [Perkinsus marinus ATCC 50983]
          Length = 302

 Score = 56.1 bits (135), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 24/132 (18%), Positives = 43/132 (32%), Gaps = 35/132 (26%)

Query: 29  VAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRI---------------------- 65
           + V  N  +IS A     + +    HA + AI                            
Sbjct: 155 IIVSPNGDVISEA---EADDRHPLRHACMEAINEVAAAATPLPAVHSGKRPRSPEGSADG 211

Query: 66  ------LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY--GASNPKGGGIENGT-QF 116
                  S  +     +++  EPC MCA A+  +R+  +Y+  GA     GG  +     
Sbjct: 212 TLSDIERSSYLCTGCSVFLFTEPCIMCAMALLHSRVAEVYFSSGAKCAGFGGFLDLDPPL 271

Query: 117 YTLATCHHSPEI 128
           +     +H+  +
Sbjct: 272 HINHRLNHTFTV 283


>gi|148261112|ref|YP_001235239.1| riboflavin biosynthesis protein RibD [Acidiphilium cryptum JF-5]
 gi|146402793|gb|ABQ31320.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Acidiphilium
           cryptum JF-5]
          Length = 363

 Score = 56.1 bits (135), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 39/157 (24%), Positives = 50/157 (31%), Gaps = 25/157 (15%)

Query: 3   KGNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
                M  AL  A+      E    P VG V V       R   R R  +    HAE   
Sbjct: 2   DDLAHMRTALALARRGL--GETAPNPTVGCVIVRG----GRVVGRGRTAQGGRPHAETE- 54

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
                   + +       YVTLEPC        CA A+  A I R+    ++P       
Sbjct: 55  ----ALAAAGDAARGATAYVTLEPCAHHGRTPPCADALVAAGIARVVVAMTDPDERTNGA 110

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
           G      A      E+  GI    + +I   F K  R
Sbjct: 111 GLSRLREAGL----EVVEGIGGAEAAEINAGFCKRIR 143


>gi|145485052|ref|XP_001428535.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124395621|emb|CAK61137.1| unnamed protein product [Paramecium tetraurelia]
          Length = 353

 Score = 55.7 bits (134), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 23/107 (21%), Positives = 36/107 (33%), Gaps = 27/107 (25%)

Query: 26  VGAVAVLNNKIISRAGNRN--------RELKDVTA---------------HAEILAIRMG 62
           VG V V +++I++   N           +  D                  HAE  AI   
Sbjct: 231 VGVVIVKDSRIVATGYNGTPYGKQNCWEKGCDRCNQNTKQGVDLEKCFCFHAEESAILE- 289

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109
              +  +    + +Y TL PC  C   I   +I ++YY     K   
Sbjct: 290 ---IGTKKSKNMVMYTTLFPCLQCTKIILSTKIDKIYYEEDYDKSAA 333


>gi|294894699|ref|XP_002774921.1| deaminase, putative [Perkinsus marinus ATCC 50983]
 gi|239880677|gb|EER06737.1| deaminase, putative [Perkinsus marinus ATCC 50983]
          Length = 283

 Score = 55.7 bits (134), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 24/132 (18%), Positives = 43/132 (32%), Gaps = 35/132 (26%)

Query: 29  VAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRI---------------------- 65
           + V  N  +IS A     + +    HA + AI                            
Sbjct: 155 IIVSPNGDVISEA---EADDRHPLRHACMEAINEVAAAATPLPAVHSGKRPRSPEGSADG 211

Query: 66  ------LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY--GASNPKGGGIENGT-QF 116
                  S  +     +++  EPC MCA A+  +R+  +Y+  GA     GG  +     
Sbjct: 212 TLSDIERSSYLCTGCSVFLFTEPCIMCAMALLHSRVAEVYFSSGAKCAGFGGFLDLDPPL 271

Query: 117 YTLATCHHSPEI 128
           +     +H+  +
Sbjct: 272 HINHRLNHTFTV 283


>gi|126659653|ref|ZP_01730783.1| hypothetical protein CY0110_25426 [Cyanothece sp. CCY0110]
 gi|126619099|gb|EAZ89838.1| hypothetical protein CY0110_25426 [Cyanothece sp. CCY0110]
          Length = 186

 Score = 55.7 bits (134), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 28/131 (21%), Positives = 42/131 (32%), Gaps = 48/131 (36%)

Query: 4   GNVFMSCALEEAQNAALRNE---IPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
              F    +  A+ AA R+     PVGAV V + ++++   N        +AH       
Sbjct: 12  DEYF----IMIAKLAATRSTCLAFPVGAVIVKDKQVLATGYN---GSPSGSAHC------ 58

Query: 61  MGCRILSQEILPEVD-------------------------------LYVTLEPCTMCAAA 89
              +      L   D                               +YVTLEPC  C   
Sbjct: 59  -TAQGFCYPGLDSCDTSSSLPSRAVHAEANAIAQAAKHGISTHGASIYVTLEPCVSCLKL 117

Query: 90  ISLARIRRLYY 100
           I  A I+ ++Y
Sbjct: 118 IISAGIKEVFY 128


>gi|139438469|ref|ZP_01771985.1| Hypothetical protein COLAER_00975 [Collinsella aerofaciens ATCC
           25986]
 gi|133776008|gb|EBA39828.1| Hypothetical protein COLAER_00975 [Collinsella aerofaciens ATCC
           25986]
          Length = 186

 Score = 55.7 bits (134), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 28/120 (23%), Positives = 40/120 (33%), Gaps = 24/120 (20%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNN-KIISRAGNRN-----------RELK 48
           +     FMS A+  AQ  +      VGA     N +I+S   N                 
Sbjct: 29  ISWDEFFMSVAIA-AQRRSKDPNTQVGACIANTNHRILSVGYNGTPSALNDDFFPWGTSD 87

Query: 49  DVTA-------HAEILAIRMGCRILSQ-EILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
           D          HAE  A+          + L    +YVTL PC  CA  ++   +  + Y
Sbjct: 88  DPLQDKHNYVVHAEANAV---LNYRGSLKDLEGSTVYVTLFPCHDCAKILAQVGVGEVVY 144


>gi|330931309|ref|XP_003303355.1| hypothetical protein PTT_15525 [Pyrenophora teres f. teres 0-1]
 gi|311320718|gb|EFQ88558.1| hypothetical protein PTT_15525 [Pyrenophora teres f. teres 0-1]
          Length = 195

 Score = 55.7 bits (134), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/131 (24%), Positives = 49/131 (37%), Gaps = 33/131 (25%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIP----VGAVAV--LNNKIISRAGNRNRELKDVTAHAE 55
                +M  AL++AQ +  +   P    VGA+ V      I+SR      E      HAE
Sbjct: 31  NDHLKYMRLALDQAQESPPK---PSNFRVGALLVDADTGDILSRGYTLECEGN---THAE 84

Query: 56  ILAIRMGCRI--LSQEIL-----PEVDLYVTLEPC-------TMCAAAISLA-------R 94
              +    +   L +E +     P   +Y T+EPC         CA  I          R
Sbjct: 85  QCCLLKFAQAHDLPEERVGEALPPNTVIYTTMEPCNLRLSGNMPCADRIIRTKGKDGEQR 144

Query: 95  IRRLYYGASNP 105
           I++++ G   P
Sbjct: 145 IKKVFLGVKEP 155


>gi|329114509|ref|ZP_08243268.1| Riboflavin biosynthesis protein RibD [Acetobacter pomorum DM001]
 gi|326695989|gb|EGE47671.1| Riboflavin biosynthesis protein RibD [Acetobacter pomorum DM001]
          Length = 350

 Score = 55.7 bits (134), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 27/123 (21%), Positives = 44/123 (35%), Gaps = 17/123 (13%)

Query: 10  CALEEAQN--AALRNEIPVGAVAVL--NNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
            A+ EA +         PVG V +    + ++  A ++       TAHAE LA+     +
Sbjct: 22  LAVAEAWSFVGRTAPNPPVGCVLLDAQGDVLVVAAHHQA-----GTAHAERLAVEQARAL 76

Query: 66  LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
              E +      VTLEPC        C  A+    ++  + G ++P       G      
Sbjct: 77  GLVERID--TAVVTLEPCNHTGRTPPCTEALLSTPVKTAWIGCADPNPHVQGGGAARLEH 134

Query: 120 ATC 122
              
Sbjct: 135 EGI 137


>gi|82539791|ref|XP_724257.1| hypothetical protein [Plasmodium yoelii yoelii str. 17XNL]
 gi|23478844|gb|EAA15822.1| hypothetical protein [Plasmodium yoelii yoelii]
          Length = 197

 Score = 55.7 bits (134), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 3/58 (5%)

Query: 7  FMSCALEEAQNAA--LRNEIPVGAVAVLNN-KIISRAGNRNRELKDVTAHAEILAIRM 61
          F+  AL EA+ +      E+P+  + +    +IIS + N   E K+   H EI+AI  
Sbjct: 13 FLKQALHEAEKSLKVETKEMPIFCLLINEKKEIISSSYNCTNESKNGCRHCEIIAIDK 70


>gi|116202471|ref|XP_001227047.1| hypothetical protein CHGG_09120 [Chaetomium globosum CBS 148.51]
 gi|88177638|gb|EAQ85106.1| hypothetical protein CHGG_09120 [Chaetomium globosum CBS 148.51]
          Length = 167

 Score = 55.7 bits (134), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 35/132 (26%), Positives = 49/132 (37%), Gaps = 28/132 (21%)

Query: 3   KGNVFMSCALEEAQNAALRNEIP----VGAVAVLN--NKIISRAGNRNRELKDVTAHAEI 56
               +M  ALE+AQ +  +   P    VGAV V +  N+I+               HAE 
Sbjct: 8   DHKAYMRLALEQAQKSPPK---PTNYRVGAVLVDSATNEILVTGYTLELSGN---THAEQ 61

Query: 57  LAIRMGCRILS--QEILP-----EVDLYVTLEPC-------TMCAA-AISLAR-IRRLYY 100
                        +E L      ++ LY T+EPC         C    + LA  IR +Y 
Sbjct: 62  TCFVKLAEKHGVSEEDLKSVLPGDLALYTTVEPCSKRLSGNLPCVERVLRLAGSIRTVYV 121

Query: 101 GASNPKGGGIEN 112
           G   P+    EN
Sbjct: 122 GIMEPETFVAEN 133


>gi|254441742|ref|ZP_05055235.1| Cytidine and deoxycytidylate deaminase zinc-binding region domain
           protein [Octadecabacter antarcticus 307]
 gi|198251820|gb|EDY76135.1| Cytidine and deoxycytidylate deaminase zinc-binding region domain
           protein [Octadecabacter antarcticus 307]
          Length = 182

 Score = 55.7 bits (134), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 27/89 (30%), Positives = 31/89 (34%), Gaps = 18/89 (20%)

Query: 26  VGAVAVL-NNKIISRAGNR--NRELKDVTAH-------------AEILAIRMGCRILSQE 69
           VG V V   N I+S   N      L     H             AE  AI    R  S  
Sbjct: 57  VGCVIVSQENGILSTGYNGFPREVLDKPDRHSSLDGEKYYWFEHAERNAIYNAVR--SGS 114

Query: 70  ILPEVDLYVTLEPCTMCAAAISLARIRRL 98
            L    LYV L PC  C  AI  + ++ L
Sbjct: 115 ALLNSRLYVNLFPCADCTRAIIQSGVKEL 143


>gi|155122216|gb|ABT14084.1| hypothetical protein MT325_M530L [Paramecium bursaria chlorella
           virus MT325]
          Length = 144

 Score = 55.7 bits (134), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 24/88 (27%), Positives = 31/88 (35%), Gaps = 16/88 (18%)

Query: 26  VGAVAVLNNKII-SRAGN--------RNRELKDVTA-----HAEILAIRMGCRILSQEIL 71
           V A+ + NN+ I S   N                       HAE  AI    R  +   L
Sbjct: 28  VAALVLDNNQNIRSTGFNGLPRGFEETTERWSKPIKYDYVVHAEANAICSAARNGAT--L 85

Query: 72  PEVDLYVTLEPCTMCAAAISLARIRRLY 99
               L+ TL PC  CA  I  A I ++ 
Sbjct: 86  AGCTLFSTLFPCNECAKLIIQAGISKIV 113


>gi|308233564|ref|ZP_07664301.1| dCMP deaminase [Atopobium vaginae DSM 15829]
          Length = 157

 Score = 55.7 bits (134), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 24/101 (23%), Positives = 32/101 (31%), Gaps = 23/101 (22%)

Query: 26  VGAVAVL-NNKIISRAGNRN-----------RELKDVTA-------HAEILAIRMGCRIL 66
           VGA     N++I+S   N                 D          HAE  A+       
Sbjct: 33  VGACIADSNDRILSVGYNGTPTGINDDEFPWESSADPLRDKHNFVIHAEANAL---LNYR 89

Query: 67  SQ-EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPK 106
              + +     YVTL PC  CA  +  A I  + Y     K
Sbjct: 90  GSLKDMQGATAYVTLFPCQECAKMLVQAGIGEVIYAEDTYK 130


>gi|253987602|ref|YP_003038958.1| deoxycytidylate deaminase-like protein [Photorhabdus asymbiotica
           subsp. asymbiotica ATCC 43949]
 gi|253779052|emb|CAQ82212.1| similar to deoxycytidylate deaminase-related protein [Photorhabdus
           asymbiotica]
          Length = 502

 Score = 55.7 bits (134), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 19/63 (30%), Positives = 26/63 (41%), Gaps = 2/63 (3%)

Query: 53  HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN 112
           HAE+ AI + C   +        LY T  PC  CA  I  + I+R+ Y    PK    + 
Sbjct: 355 HAEMEAI-LACARSNISTYNG-ILYCTTFPCHNCAKHIVASGIKRVVYIEPYPKSKAFDF 412

Query: 113 GTQ 115
              
Sbjct: 413 HPD 415


>gi|256078948|ref|XP_002575754.1| cytidine deaminase; dCTP deaminase [Schistosoma mansoni]
 gi|238661001|emb|CAZ31988.1| cytidine deaminase [Schistosoma mansoni]
          Length = 655

 Score = 55.7 bits (134), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 16/67 (23%), Positives = 28/67 (41%)

Query: 64  RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123
           +     +    D Y +LEPC MC  A+   RIRR++        G   N ++ +     +
Sbjct: 587 QYSDSYLCTGFDAYFSLEPCLMCGMALLHNRIRRVFCCQKLAGDGAFTNASRLHVQEQLN 646

Query: 124 HSPEIYP 130
           H   ++ 
Sbjct: 647 HRFRVFS 653


>gi|126667632|ref|ZP_01738601.1| Cytidine/deoxycytidylate deaminase, zinc-binding region
           [Marinobacter sp. ELB17]
 gi|126627901|gb|EAZ98529.1| Cytidine/deoxycytidylate deaminase, zinc-binding region
           [Marinobacter sp. ELB17]
          Length = 482

 Score = 55.7 bits (134), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 19/71 (26%), Positives = 28/71 (39%), Gaps = 6/71 (8%)

Query: 53  HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN 112
           HAE+ A+    R        +  LY T  PC  CA  I +A I+ + Y    PK      
Sbjct: 336 HAEMDALLQASRNGISIR--DAKLYTTTFPCHNCAKHIVVAGIKEVVYIEPYPKSFA--- 390

Query: 113 GTQFYTLATCH 123
            T  +  +  +
Sbjct: 391 -TTLHDDSINN 400


>gi|194748439|ref|XP_001956653.1| GF25318 [Drosophila ananassae]
 gi|190623935|gb|EDV39459.1| GF25318 [Drosophila ananassae]
          Length = 187

 Score = 55.7 bits (134), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/125 (25%), Positives = 43/125 (34%), Gaps = 36/125 (28%)

Query: 4   GNVFMSCALEEAQNAALRNEIPV---GAVAVL-NNKIISRAGNR------------NREL 47
            + FM+ +L  AQ +      PV   GA  V   N+I++   N              +  
Sbjct: 13  DDYFMATSLLSAQRSKD----PVTQVGACIVDSQNRIVAIGYNGFPRNCSDDEFPWTKAK 68

Query: 48  KDV------------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARI 95
           KD               HAE  AI       +   L    LY TL PC  CA  I  + I
Sbjct: 69  KDTKDFDPLKDKKMYVVHAEANAILN----SNGATLTGTRLYTTLFPCNECAKLIIQSGI 124

Query: 96  RRLYY 100
             + Y
Sbjct: 125 SDILY 129


>gi|242219302|ref|XP_002475432.1| predicted protein [Postia placenta Mad-698-R]
 gi|220725368|gb|EED79358.1| predicted protein [Postia placenta Mad-698-R]
          Length = 137

 Score = 55.3 bits (133), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 24/112 (21%), Positives = 40/112 (35%), Gaps = 26/112 (23%)

Query: 12  LEEAQNAALRNE---IPVGAVAVLNNKIISRAGN---------------RNRELKDVTA- 52
           ++ A+ A+ R+      VGA+ V N +I++   N               R    K+ +  
Sbjct: 1   MQLAELASERSNCMKRRVGAILVRNKRILATGYNGTPRGLTNCNEGGCTRCNSGKEASDE 60

Query: 53  ----HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
               HAE  A+    R    +      LY    PC  C   I    ++ + Y
Sbjct: 61  CVCLHAEENALLEAGRERVGD---GAVLYCNTCPCLKCTIKIIQTGVKEVVY 109


>gi|156396554|ref|XP_001637458.1| predicted protein [Nematostella vectensis]
 gi|156224570|gb|EDO45395.1| predicted protein [Nematostella vectensis]
          Length = 432

 Score = 55.3 bits (133), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 23/102 (22%), Positives = 42/102 (41%), Gaps = 16/102 (15%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTA---HAEILA 58
           +K ++FM  AL   ++     E   GAV V +        N      D T    H  + A
Sbjct: 42  QKEDLFMVLALFMRESPWADGEPTTGAVYVQD--------NGRLLSVDCTRLGIHGGVQA 93

Query: 59  IRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
           +     I   + +    +Y++  PC  CA  ++   ++++YY
Sbjct: 94  L-----IKYPDKIKGCTVYLSSFPCASCAKFLTQFGVKKVYY 130



 Score = 43.0 bits (101), Expect = 0.014,   Method: Composition-based stats.
 Identities = 20/123 (16%), Positives = 34/123 (27%), Gaps = 29/123 (23%)

Query: 3   KGNVFMSCALEEAQN---AALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTA------- 52
               F+  +   AQ    A+    + +G V   + +++    N        T        
Sbjct: 273 DHEEFLHLS-RVAQLLSYASDDPHVGIGCVITKDRELVGFGWNHFLNGGYGTFPQASDSP 331

Query: 53  ----------------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIR 96
                           HAE  AI    R       P   ++ T  PC  C   +    ++
Sbjct: 332 DFSHVSKDQLKYPFVVHAEQNAI--ISRNTRDISGPGTTMFATRSPCDECMPLLLGVGVK 389

Query: 97  RLY 99
           R  
Sbjct: 390 RFV 392


>gi|255017990|ref|ZP_05290116.1| hypothetical protein LmonF_10155 [Listeria monocytogenes FSL
           F2-515]
          Length = 141

 Score = 55.3 bits (133), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 2/51 (3%)

Query: 51  TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
           T HAE+ AI    +  +     + +LYVT  PC  C  +I  A I+++Y+ 
Sbjct: 23  TIHAEMNAILQCAKFGATTD--KAELYVTHFPCLACTKSIIQAGIKKVYFA 71


>gi|288574554|ref|ZP_06392911.1| CMP/dCMP deaminase zinc-binding [Dethiosulfovibrio peptidovorans
           DSM 11002]
 gi|288570295|gb|EFC91852.1| CMP/dCMP deaminase zinc-binding [Dethiosulfovibrio peptidovorans
           DSM 11002]
          Length = 191

 Score = 55.3 bits (133), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 18/88 (20%), Positives = 35/88 (39%), Gaps = 6/88 (6%)

Query: 16  QNAALRNEIPVGAVAVLNNK---IISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILP 72
           +          GA  +  +    +++   N   EL+    H E+  I+    + ++    
Sbjct: 23  RKGVEEGHKVFGAAILKKDDLSLVVA-GTNH--ELECPLWHGEVYTIKKFYEMSNRPDPK 79

Query: 73  EVDLYVTLEPCTMCAAAISLARIRRLYY 100
           +     T EPC+MC +AI+ A     Y+
Sbjct: 80  DCVFLSTHEPCSMCLSAIAWAGFPEFYF 107


>gi|256826526|ref|YP_003150485.1| deoxycytidylate deaminase [Cryptobacterium curtum DSM 15641]
 gi|256582669|gb|ACU93803.1| deoxycytidylate deaminase [Cryptobacterium curtum DSM 15641]
          Length = 156

 Score = 55.3 bits (133), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 29/123 (23%), Positives = 40/123 (32%), Gaps = 30/123 (24%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNN-KIISRAGNRN-----------R 45
           +     FM  A+  +Q +      P   VGA     N +I+S   N              
Sbjct: 9   ITWDQFFMGVAIAASQRSKD----PHTQVGACIADTNHRILSVGYNGTPSALNDDDFPWG 64

Query: 46  ELKDVTA-------HAEILAIRMGCRILSQ-EILPEVDLYVTLEPCTMCAAAISLARIRR 97
              D          HAE  A+          + +     YVTL PC  CA  +  A IR 
Sbjct: 65  ASDDPLHDKHSYVVHAEANAV---LNYRGSLKDMDGASAYVTLFPCHECAKILVQAGIRE 121

Query: 98  LYY 100
           + Y
Sbjct: 122 VVY 124


>gi|331697233|ref|YP_004333472.1| riboflavin biosynthesis protein RibD [Pseudonocardia dioxanivorans
           CB1190]
 gi|326951922|gb|AEA25619.1| riboflavin biosynthesis protein RibD [Pseudonocardia dioxanivorans
           CB1190]
          Length = 385

 Score = 55.3 bits (133), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 23/99 (23%), Positives = 34/99 (34%), Gaps = 26/99 (26%)

Query: 25  PVGAVAV-LNNKIISRAGNRNRELKDVTA-----HAEILAIRMGCRILSQEILPEVDLYV 78
           PVG V +  + ++              TA     HAE+ A+         E        V
Sbjct: 44  PVGCVVLDRDGRVAGTG---------ATAPPGGPHAEVAALAEAG-----ERARGGTAVV 89

Query: 79  TLEPC------TMCAAAISLARIRRLYYGASNPKGGGIE 111
           TLEPC        C  A+  A I  ++ G ++P      
Sbjct: 90  TLEPCAHHGRTPPCTDALRAAGIVAVHAGVADPNPVAAG 128


>gi|254585785|ref|XP_002498460.1| ZYRO0G10824p [Zygosaccharomyces rouxii]
 gi|238941354|emb|CAR29527.1| ZYRO0G10824p [Zygosaccharomyces rouxii]
          Length = 331

 Score = 55.3 bits (133), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 17/67 (25%), Positives = 32/67 (47%), Gaps = 4/67 (5%)

Query: 73  EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI----ENGTQFYTLATCHHSPEI 128
           + D+Y T EPC+MC+ A+  +R++R  +     K G +     NG   +     +   E+
Sbjct: 253 DFDVYTTHEPCSMCSMALIHSRVKRCIFLQPMIKTGCLKTESGNGYCMHNNRKLNSKYEV 312

Query: 129 YPGISEQ 135
           +  I  +
Sbjct: 313 FQWIGNE 319


>gi|39971965|ref|XP_367373.1| hypothetical protein MGG_07298 [Magnaporthe oryzae 70-15]
 gi|145019803|gb|EDK04031.1| hypothetical protein MGG_07298 [Magnaporthe oryzae 70-15]
          Length = 339

 Score = 55.3 bits (133), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 29/122 (23%), Positives = 38/122 (31%), Gaps = 31/122 (25%)

Query: 4   GNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGN---------------RNRE 46
              FMS A   AQ +    R    VG V +   +++S   N               R  E
Sbjct: 192 DAYFMSLASLAAQRSNCMKRR---VGCVLIREKRVVSTGYNGTPRGLLNCGEGGCGRCNE 248

Query: 47  LKD-----VT---AHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98
                    T    HAE  A+    R     I     LY    PC  C+  I+   I  +
Sbjct: 249 GLSSGVGLATCLCLHAEENALLEAGR---DRIRDGSILYCDTCPCLTCSIKIAQVGISEV 305

Query: 99  YY 100
            Y
Sbjct: 306 VY 307


>gi|313156981|gb|EFR56413.1| riboflavin biosynthesis protein RibD C-terminal domain protein
           [Alistipes sp. HGB5]
          Length = 358

 Score = 55.3 bits (133), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 27/142 (19%), Positives = 43/142 (30%), Gaps = 25/142 (17%)

Query: 4   GNVFMSCALEEAQNAALRNEIP------VGAVAVLNNKIISRAGNRNRELKDVTAHAEIL 57
              F+  A++E +        P      VGAV V  +  I             T HAE  
Sbjct: 216 DLRFLKQAVDEGRKC-----TPSATSYCVGAVVVAADGRIFAGH---THETSPTHHAEQE 267

Query: 58  AIRMGCRILSQEILPEVDLYVTLEPCTM-------CAAAISLARIRRLYYGASNPKGGGI 110
              +   + +   L    +Y ++EPC+        C   +      R  +    P     
Sbjct: 268 --AIAKALAAGAPLRGAAMYSSMEPCSQRASEPESCTQLLLKYGFARAVFALYEPDCFVC 325

Query: 111 ENGTQFYTLATCHHSPEIYPGI 132
             G      A       +YPG+
Sbjct: 326 CRGALTLREAGVD--VRVYPGL 345


>gi|195957488|gb|ACG59599.1| deoxycytidylate deaminase [Escherichia coli O157:H7]
          Length = 498

 Score = 55.3 bits (133), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 20/71 (28%), Positives = 29/71 (40%), Gaps = 2/71 (2%)

Query: 53  HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN 112
           HAE+ AI    R        +  +Y T  PC  CA  I  + I+R+ Y    PK    E 
Sbjct: 354 HAEMEAILACARTNIST--QDAYIYCTTFPCHNCAKHIIASGIKRVVYIEPYPKSKAYEF 411

Query: 113 GTQFYTLATCH 123
            +Z  T    +
Sbjct: 412 HSZSITNDEKN 422


>gi|324999324|ref|ZP_08120436.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Pseudonocardia sp. P1]
          Length = 368

 Score = 55.3 bits (133), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 25/140 (17%), Positives = 39/140 (27%), Gaps = 27/140 (19%)

Query: 8   MSCALEEAQNAALRN----EIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
           M  AL  A +  +         VG V +     ++               HAE +A+   
Sbjct: 32  MRRAL--AASDLVHGTTSPNPAVGCVVLDRAGAVVGTG--ATTPPGGP--HAERVALAEA 85

Query: 63  CRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116
                 +        VTLEPC        C   +  A I R+Y   ++P         + 
Sbjct: 86  G-----DRAAGGTAVVTLEPCNHSGRTPPCVDGLLEAGIARVYAALADPNPVAAGGLDRL 140

Query: 117 YTLATCHHSPEIYPGISEQR 136
                     E+  G     
Sbjct: 141 RAA-----GIEVTLGTLAGE 155


>gi|213585178|ref|ZP_03367004.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
          deaminase/5-amino-6-(5-phosphoribosylamino)uracil
          reductase [Salmonella enterica subsp. enterica serovar
          Typhi str. E98-0664]
          Length = 69

 Score = 55.3 bits (133), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 18/61 (29%), Positives = 27/61 (44%), Gaps = 6/61 (9%)

Query: 3  KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
          +   +M+ AL+ AQ      +  P VG V V N  I+    +          HAE+ A+R
Sbjct: 2  QDEFYMARALKLAQRGRFTTHPNPNVGCVIVNNGDIVGEGYHHRAGE----PHAEVHALR 57

Query: 61 M 61
          M
Sbjct: 58 M 58


>gi|118377695|ref|XP_001022025.1| hypothetical protein TTHERM_00564260 [Tetrahymena thermophila]
 gi|89303792|gb|EAS01780.1| hypothetical protein TTHERM_00564260 [Tetrahymena thermophila
          SB210]
          Length = 68

 Score = 54.9 bits (132), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 29/51 (56%), Gaps = 6/51 (11%)

Query: 5  NVFMSCALEEAQNAALRNEIPVGAVAVL------NNKIISRAGNRNRELKD 49
          N +M  A+E+++ A  + E+ VG V V       +++I++++ N+  +  +
Sbjct: 17 NYYMKLAIEQSKIATDKLEVAVGCVMVKFTNNNQDHEIVAQSHNKTNQYGN 67


>gi|307154689|ref|YP_003890073.1| CMP/dCMP deaminase zinc-binding protein [Cyanothece sp. PCC 7822]
 gi|306984917|gb|ADN16798.1| CMP/dCMP deaminase zinc-binding protein [Cyanothece sp. PCC 7822]
          Length = 185

 Score = 54.9 bits (132), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 24/130 (18%), Positives = 37/130 (28%), Gaps = 46/130 (35%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTA--HAEILAIRM 61
              F+  A   A  +      PVGAV V + ++++   N        T   H        
Sbjct: 12  DEYFLMIAKLAATRSTCLA-FPVGAVIVKDRQVLATGYN-----GSPTGSVHC------- 58

Query: 62  GCRILSQEILPEV-------------------------------DLYVTLEPCTMCAAAI 90
             +      L                                   +YVTLEPC  C   I
Sbjct: 59  TAQGFCYPGLTSCDASSTLPSRAVHAEANAIAQAAKHGINTNGSTIYVTLEPCISCLKLI 118

Query: 91  SLARIRRLYY 100
             + I+ ++Y
Sbjct: 119 ISSGIKEVFY 128


>gi|302695431|ref|XP_003037394.1| hypothetical protein SCHCODRAFT_46727 [Schizophyllum commune H4-8]
 gi|300111091|gb|EFJ02492.1| hypothetical protein SCHCODRAFT_46727 [Schizophyllum commune H4-8]
          Length = 288

 Score = 54.9 bits (132), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 25/97 (25%), Positives = 31/97 (31%), Gaps = 25/97 (25%)

Query: 26  VGAVAVL---NNKIISRAGNRN-RELKDVTA------------------HAEILAIRMGC 63
           VGAV V     N+II+   N   R L +  A                  HAE  A+    
Sbjct: 150 VGAVLVDVRGGNRIIATGYNGTPRGLTNCNAGGCPRCNTGMESVECICLHAEENALLEAG 209

Query: 64  RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
           R       P   LY    PC  C   I    +  + Y
Sbjct: 210 RERVG---PGAVLYCNTCPCLKCTVKIIQTGVSTVVY 243


>gi|328943349|ref|ZP_08240814.1| competence protein comEB [Atopobium vaginae DSM 15829]
 gi|327491318|gb|EGF23092.1| competence protein comEB [Atopobium vaginae DSM 15829]
          Length = 165

 Score = 54.9 bits (132), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 24/101 (23%), Positives = 32/101 (31%), Gaps = 23/101 (22%)

Query: 26  VGAVAVL-NNKIISRAGNRN-----------RELKDVTA-------HAEILAIRMGCRIL 66
           VGA     N++I+S   N                 D          HAE  A+       
Sbjct: 41  VGACIADSNDRILSVGYNGTPTGINDDEFPWESSADPLRDKHNFVIHAEANAL---LNYR 97

Query: 67  SQ-EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPK 106
              + +     YVTL PC  CA  +  A I  + Y     K
Sbjct: 98  GSLKDMQGATAYVTLFPCQECAKMLVQAGIGEVIYAEDTYK 138


>gi|50306117|ref|XP_453020.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
 gi|49642153|emb|CAH01871.1| KLLA0C18403p [Kluyveromyces lactis]
          Length = 328

 Score = 54.9 bits (132), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 23/131 (17%), Positives = 47/131 (35%), Gaps = 32/131 (24%)

Query: 32  LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEI--------------------L 71
            + KII       R       H+ ++ I    +   +                       
Sbjct: 191 KSGKIIISK--DYRHSGSPLDHSVMVGINEVAKEEQERRDRVQNGTASEKDIHQGETYLC 248

Query: 72  PEVDLYVTLEPCTMCAAAISLARIRRLYY-------GASNPKGGGIENGTQFYTLATCHH 124
            + D+Y + EPC+MC+ A+  +R++R  +       GA  P  G   +G   ++    + 
Sbjct: 249 LDFDVYTSHEPCSMCSMALIHSRVKRCIFINPMSVSGALKPDSG---DGYCMHSNKDLNS 305

Query: 125 SPEIYPGISEQ 135
             E++  + E+
Sbjct: 306 KYEVFQWVGEE 316


>gi|222085898|ref|YP_002544429.1| deoxycytidylate deaminase family protein [Agrobacterium radiobacter
           K84]
 gi|221723346|gb|ACM26502.1| deoxycytidylate deaminase family protein [Agrobacterium radiobacter
           K84]
          Length = 195

 Score = 54.9 bits (132), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 21/88 (23%), Positives = 37/88 (42%), Gaps = 6/88 (6%)

Query: 16  QNAALRNEIPVGAVAVLNNK---IISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILP 72
           Q          GA  +  +    +++     N EL++   H E+ A++    +  +    
Sbjct: 23  QKGVAAGNKVFGAAILRKSDLSLVVAE---TNNELENPLWHGEVHALKRFYELGDRPATK 79

Query: 73  EVDLYVTLEPCTMCAAAISLARIRRLYY 100
           ++    T EPCTMC +AI+ A     YY
Sbjct: 80  DLIFLSTHEPCTMCMSAITWAGFDNFYY 107


>gi|281204340|gb|EFA78536.1| hypothetical protein PPL_09188 [Polysphondylium pallidum PN500]
          Length = 247

 Score = 54.9 bits (132), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 22/85 (25%), Positives = 35/85 (41%), Gaps = 9/85 (10%)

Query: 26  VGAVAVL-NNKIISRAGNRNRELKDVTA-HAEILAIRMGCRILS----QEILPEVDLYVT 79
             A+    N  I+    N   + KD    H+E++AI      L     +    +  LY T
Sbjct: 69  FSALIAHKNGSILCTGIN---KQKDGLHLHSEMVAIMNCTDKLRALGVKPNFSDYYLYST 125

Query: 80  LEPCTMCAAAISLARIRRLYYGASN 104
            E C+MC  A+S     +  + +SN
Sbjct: 126 GESCSMCTGAMSWTGFSKNIFASSN 150


>gi|134108590|ref|XP_776948.1| hypothetical protein CNBB4760 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|50259631|gb|EAL22301.1| hypothetical protein CNBB4760 [Cryptococcus neoformans var.
           neoformans B-3501A]
          Length = 350

 Score = 54.9 bits (132), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 24/120 (20%), Positives = 40/120 (33%), Gaps = 27/120 (22%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGN-----RNR------ELKDVTA 52
              FM+ A   A   +   +  VGA+ V + +I+S   N                 + +A
Sbjct: 204 DTYFMTLA-SLASERSNCMKRRVGALLVRSKRILSTGYNGTPRGTRNCNQGGCSRCNGSA 262

Query: 53  ------------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
                       HAE  A+    R    +   +  +Y    PC  C+  I    +R + Y
Sbjct: 263 RGGEALNECLCLHAEENALLEAGRERIGD---DSVIYCNTCPCLRCSVKIVQCGVREVVY 319


>gi|116513488|ref|YP_812394.1| deoxycytidylate deaminase [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC BAA-365]
 gi|116092803|gb|ABJ57956.1| Deoxycytidylate deaminase [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC BAA-365]
          Length = 148

 Score = 54.9 bits (132), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 25/113 (22%), Positives = 43/113 (38%), Gaps = 28/113 (24%)

Query: 8   MSCALEEAQN-----AALRNEIPVGAVAVLNNKIISRAGNRNRELKD------------- 49
           M  AL  AQ      A       VG+V V + +I+S   N +   +D             
Sbjct: 1   MMQALVIAQRSTCDRAL------VGSVLVKDKRILSTGYNGSVSGQDHCDDVGHQLVDGH 54

Query: 50  --VTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
              T H+E+ ++    +        + ++YVT  PC  C   +  A + ++ Y
Sbjct: 55  CVRTIHSEMNSLISCAKNGVSTD--DTEIYVTHFPCYNCTKHLLQAGVIKINY 105


>gi|323450336|gb|EGB06218.1| hypothetical protein AURANDRAFT_16078 [Aureococcus
          anophagefferens]
          Length = 96

 Score = 54.9 bits (132), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 21/98 (21%), Positives = 40/98 (40%), Gaps = 6/98 (6%)

Query: 4  GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTA--HAEILAIRM 61
             ++  A   A+N+  ++   +G   V +  +++   N      D  +  HAE  A+  
Sbjct: 3  DENYLDLAYLLARNSEAKDGH-MGCCVVRDGAVVATTIN-CGLFGDARSDVHAEAAAVSD 60

Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLY 99
            R      L    +YVT  PC  C   +++A + R+ 
Sbjct: 61 CARRGVP--LGGASIYVTRAPCPRCYKLVAVAGVCRVV 96


>gi|145295718|ref|YP_001138539.1| hypothetical protein cgR_1645 [Corynebacterium glutamicum R]
 gi|140845638|dbj|BAF54637.1| hypothetical protein [Corynebacterium glutamicum R]
          Length = 328

 Score = 54.9 bits (132), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 28/122 (22%), Positives = 45/122 (36%), Gaps = 32/122 (26%)

Query: 10  CALEEAQNAAL--RN----EIPVGAVAVL-NNKIISRAGNRNRELKDVTA-----HAEIL 57
            AL+ A +A+   R       PVGAV +  + +++             TA     HAE++
Sbjct: 5   HALDLAHHASDQVRGTTSPNPPVGAVILDADGEVVGVG---------ATAPPGGPHAEVV 55

Query: 58  AIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIE 111
                    +          VTLEPC        C+ A+  A I  ++Y  ++P      
Sbjct: 56  -----ALAAAGARANGGTAVVTLEPCNHYGRTGPCSKALLDAGIAHVFYANADPFPSAAG 110

Query: 112 NG 113
            G
Sbjct: 111 GG 112


>gi|66391526|ref|YP_239051.1| Cd dCMP deaminase [Enterobacteria phage RB43]
 gi|62288614|gb|AAX78597.1| Cd dCMP deaminase [Enterobacteria phage RB43]
          Length = 174

 Score = 54.9 bits (132), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 27/127 (21%), Positives = 46/127 (36%), Gaps = 37/127 (29%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNREL-------------------- 47
           M  A++++Q +   +   VGAV V+N +++S+  N   +                     
Sbjct: 6   MIRAIKQSQGSRCISNR-VGAVIVMNGRVVSQGTNNTVDSDCRCADHNNHMLNDEGKLKA 64

Query: 48  ----------KDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLA---- 93
                      D   HAE+ A+       +  +L   +LY T  PC  CA  I       
Sbjct: 65  IHRPEHSAWSNDNEIHAEMKALLSA--HTNGIMLNNAELYTTASPCPNCAKHIEWYVAIG 122

Query: 94  RIRRLYY 100
            I  +Y+
Sbjct: 123 AITSVYF 129


>gi|325685005|gb|EGD27144.1| riboflavin biosynthesis protein RibD [Lactobacillus delbrueckii
           subsp. lactis DSM 20072]
          Length = 280

 Score = 54.9 bits (132), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 17/69 (24%), Positives = 28/69 (40%), Gaps = 10/69 (14%)

Query: 78  VTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPG 131
           +TLEPC        C   I  + I+R+  GA++P       G      A      E+  G
Sbjct: 1   MTLEPCCHYGKQPPCTQLIIDSGIKRVVVGATDPHSLVTGKGIAALRQAGL----EVSTG 56

Query: 132 ISEQRSRQI 140
           +  + + Q+
Sbjct: 57  LLAKEASQL 65


>gi|46578483|ref|YP_009291.1| cytidine/deoxycytidylate deaminase domain-containing protein
           [Desulfovibrio vulgaris str. Hildenborough]
 gi|120603933|ref|YP_968333.1| CMP/dCMP deaminase, zinc-binding [Desulfovibrio vulgaris DP4]
 gi|46447894|gb|AAS94550.1| cytidine/deoxycytidylate deaminase domain protein [Desulfovibrio
           vulgaris str. Hildenborough]
 gi|120564162|gb|ABM29906.1| CMP/dCMP deaminase, zinc-binding protein [Desulfovibrio vulgaris
           DP4]
 gi|311232411|gb|ADP85265.1| CMP/dCMP deaminase zinc-binding protein [Desulfovibrio vulgaris
           RCH1]
          Length = 189

 Score = 54.5 bits (131), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 19/77 (24%), Positives = 31/77 (40%), Gaps = 4/77 (5%)

Query: 26  VGAVAVLNNKI--ISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83
            GA  +  + +  +    N   E      H EI  IR    +       +     T +PC
Sbjct: 33  FGAAVLRRDDLSLVLAGTNH--EALSPLWHGEIWTIRQFYEMQGHPDPADCVFLSTHQPC 90

Query: 84  TMCAAAISLARIRRLYY 100
            MCA+A++ +  R +YY
Sbjct: 91  CMCASALAWSGFREVYY 107


>gi|189190780|ref|XP_001931729.1| cytidine and deoxycytidylate deaminase zinc-binding domain
           containing protein [Pyrenophora tritici-repentis
           Pt-1C-BFP]
 gi|187973335|gb|EDU40834.1| cytidine and deoxycytidylate deaminase zinc-binding domain
           containing protein [Pyrenophora tritici-repentis
           Pt-1C-BFP]
          Length = 195

 Score = 54.5 bits (131), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 32/131 (24%), Positives = 47/131 (35%), Gaps = 33/131 (25%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIP----VGAVAV--LNNKIISRAGNRNRELKDVTAHAE 55
                +M  AL++AQ +  +   P    VGA+ V      I+SR      E      HAE
Sbjct: 31  NDHLQYMRLALDQAQESPPK---PSNFRVGALLVDADTGDILSRGYTLECEGN---THAE 84

Query: 56  ILAIRMGCRILS------QEILP-EVDLYVTLEPC-------TMCAAAISLA-------R 94
              +    +          E LP    +Y T+EPC         CA  I          R
Sbjct: 85  QCCLLKFAQEHGLPEERVGEALPSNTVIYTTMEPCNLRLSGNMPCADRIIRTKGKDGEQR 144

Query: 95  IRRLYYGASNP 105
           I++++ G   P
Sbjct: 145 IKKVFLGVKEP 155


>gi|46135871|ref|XP_389627.1| hypothetical protein FG09451.1 [Gibberella zeae PH-1]
          Length = 177

 Score = 54.5 bits (131), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 32/126 (25%), Positives = 49/126 (38%), Gaps = 23/126 (18%)

Query: 3   KGNVFMSCALEEAQNA-ALRNEIPVGAVAVL--NNKIISRAGNR---NRELKDV-TAHAE 55
               FM  AL +A+ +    N+  VGA+ V     K++S   +         D  T HAE
Sbjct: 13  DHEAFMEFALTQAKKSPPAANKFCVGAILVDAAKGKVLSTGYSLEYPRDYKGDPGTTHAE 72

Query: 56  ILA-IRMGCRI-LSQEIL-----PEVDLYVTLEPC-------TMCAAAI--SLARIRRLY 99
               I++     L +E +      +  LY T+EPC         C   I    + I+ +Y
Sbjct: 73  QCCFIKIADEHNLPEERIHEVLPEDTVLYTTMEPCNERLSGNMTCTTRILRLKSAIKTVY 132

Query: 100 YGASNP 105
            G   P
Sbjct: 133 VGIKEP 138


>gi|288560542|ref|YP_003424028.1| CMP/dCMP deaminase [Methanobrevibacter ruminantium M1]
 gi|288543252|gb|ADC47136.1| CMP/dCMP deaminase [Methanobrevibacter ruminantium M1]
          Length = 149

 Score = 54.5 bits (131), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 24/136 (17%), Positives = 46/136 (33%), Gaps = 42/136 (30%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGN-RNRELKDV--------- 50
           M K + +++ A   ++ +        GAV V N++IIS   N   R  ++          
Sbjct: 11  MSKTDYYLAIAFAVSKRSTCLKRH-YGAVIVNNDEIISTGYNGNPRGEENCCDRGSCKRM 69

Query: 51  -------------TAHAEILAIRMGCRILSQEILPEVDLYVTL--------------EPC 83
                        + HAE  A+    R      +    +Y+                EPC
Sbjct: 70  DVPSNSGDYSDCFSVHAEQNAMISASRN----EMIGATIYLAGEMFKDDSWFEIEDAEPC 125

Query: 84  TMCAAAISLARIRRLY 99
            +C   I  + ++++ 
Sbjct: 126 PICFRMIKNSGVKKIV 141


>gi|116204963|ref|XP_001228292.1| hypothetical protein CHGG_10365 [Chaetomium globosum CBS 148.51]
 gi|88176493|gb|EAQ83961.1| hypothetical protein CHGG_10365 [Chaetomium globosum CBS 148.51]
          Length = 414

 Score = 54.5 bits (131), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 26/170 (15%), Positives = 61/170 (35%), Gaps = 53/170 (31%)

Query: 6   VFMSCALEEAQNAALRN-EIPVGAVAVLNNK----IISRAG-----NRNRE--LKDVTAH 53
           ++M+ A + A+ +       P+GA  +  ++    +++ AG     ++ +     +  AH
Sbjct: 202 IWMTLAHKVAKESHDAGYGEPMGACVIQRDEGKTTLVALAGDSRWCHQEKTGCTGNPMAH 261

Query: 54  AEILAIRMGCRIL-----------------------------------------SQEILP 72
           + + AI +  + L                                            +  
Sbjct: 262 SAMRAISIVAQKLVRAENRKTQTRQKPILEFEAFQDSPIAGDEMKVFELEHPNPDGYLCH 321

Query: 73  EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
            +++Y+T EPC MC+ AI  +R+ ++ +    P  GG+    +     + 
Sbjct: 322 GLEMYLTHEPCVMCSMAILHSRMGKVVFRHRMPLTGGLCAEDRGRDHPSL 371


>gi|58265046|ref|XP_569679.1| hypothetical protein CNC04270 [Cryptococcus neoformans var.
           neoformans JEC21]
 gi|57225911|gb|AAW42372.1| hypothetical protein CNC04270 [Cryptococcus neoformans var.
           neoformans JEC21]
          Length = 647

 Score = 54.5 bits (131), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 24/138 (17%), Positives = 42/138 (30%), Gaps = 46/138 (33%)

Query: 44  NRELKDVTAHAEILAIRMGC--------------RILSQEILPEVDLYVTLEPCTMCAAA 89
                    HA +  +                  R  +  +L  + L+++ EPC MCA A
Sbjct: 497 RISESHPLRHATLNCVASIAHLRTVPPFTDVPPTRNGADYLLTSLSLFISHEPCVMCAMA 556

Query: 90  ISLARIRRLYYGASNPKGGGIE-----------------------------NGTQFYTLA 120
           +  +R+R ++Y     KGGG E                              G   +   
Sbjct: 557 LLHSRVREVFYVFPRKKGGGFEYNEGNEYGEGSPVHQHDEGAGTREDISGQGGFGIHARR 616

Query: 121 TCHHSPEIY---PGISEQ 135
             +H  E++     + E 
Sbjct: 617 DLNHRFEVWKWNGHVDED 634


>gi|134109371|ref|XP_776800.1| hypothetical protein CNBC2910 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|50259480|gb|EAL22153.1| hypothetical protein CNBC2910 [Cryptococcus neoformans var.
           neoformans B-3501A]
          Length = 647

 Score = 54.5 bits (131), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 24/138 (17%), Positives = 42/138 (30%), Gaps = 46/138 (33%)

Query: 44  NRELKDVTAHAEILAIRMGC--------------RILSQEILPEVDLYVTLEPCTMCAAA 89
                    HA +  +                  R  +  +L  + L+++ EPC MCA A
Sbjct: 497 RISESHPLRHATLNCVASIAHLRTVPPFTDVPPTRNGADYLLTSLSLFISHEPCVMCAMA 556

Query: 90  ISLARIRRLYYGASNPKGGGIE-----------------------------NGTQFYTLA 120
           +  +R+R ++Y     KGGG E                              G   +   
Sbjct: 557 LLHSRVREVFYVFPRKKGGGFEYNEGNEYGEGSPVHQHDEGAGTREDISGQGGFGIHARR 616

Query: 121 TCHHSPEIY---PGISEQ 135
             +H  E++     + E 
Sbjct: 617 DLNHRFEVWKWNGHVDED 634


>gi|294882997|ref|XP_002769907.1| Deoxycytidylate deaminase, putative [Perkinsus marinus ATCC 50983]
 gi|239873756|gb|EER02625.1| Deoxycytidylate deaminase, putative [Perkinsus marinus ATCC 50983]
          Length = 115

 Score = 54.5 bits (131), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 29/109 (26%), Positives = 44/109 (40%), Gaps = 24/109 (22%)

Query: 27  GAVAVLN-NKIISRAGN---RNRELKDVTA----------------HAEILAIRMGCRIL 66
           G V V + N+I++   N   R    KD+                  HA I AI       
Sbjct: 11  GVVIVNDQNRIVAVGYNGMPRGIADKDLPWASHHEDKAQEKHMYMCHATINAIMN----K 66

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
           +Q  + +  +Y T  PC  CA  I  + IRR+ Y A   + G +E+  +
Sbjct: 67  NQHSVRDCRIYATAFPCCECAKFIVQSGIRRVAYVADELEDGAVEDVMR 115


>gi|39946638|ref|XP_362856.1| hypothetical protein MGG_08581 [Magnaporthe oryzae 70-15]
 gi|145012440|gb|EDJ97096.1| hypothetical protein MGG_08581 [Magnaporthe oryzae 70-15]
          Length = 425

 Score = 54.5 bits (131), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 32/175 (18%), Positives = 58/175 (33%), Gaps = 60/175 (34%)

Query: 6   VFMSCALEEAQNAALRN-EIPVGAVAVL-----NNKIISRAGNRNRE-----------LK 48
           ++M+ A + A   A     I VGA  +        K+++ AG+                 
Sbjct: 201 IWMALAHKVASKTAAAGLGIAVGACIIQRLETGETKLVALAGDARWSHQPGGQETGSCTG 260

Query: 49  DVTAHAEILAIRMGCRILSQ---------------------------------------- 68
           +  AHA + AI M  R L +                                        
Sbjct: 261 NPMAHAVLRAISMVARKLVRAENRQGPSLSNAPLSVDFDPFQDEPMLDEERKVFDDDHPS 320

Query: 69  ---EILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
               +   ++LY+T EPC MC+ +I  +R+ ++      P  GG+ +  +    +
Sbjct: 321 PEGYLCHGLELYLTHEPCVMCSMSILHSRMGKVILAQRMPLTGGMCSEDRILDES 375


>gi|126729047|ref|ZP_01744861.1| deoxycytidylate deaminase [Sagittula stellata E-37]
 gi|126710037|gb|EBA09089.1| deoxycytidylate deaminase [Sagittula stellata E-37]
          Length = 152

 Score = 54.5 bits (131), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 23/114 (20%), Positives = 38/114 (33%), Gaps = 26/114 (22%)

Query: 4   GNVFMSCALEEAQNAALRNEIP---VGAVAVLNNK-IISRAGN--------RNRELKD-V 50
              F+  A+  A  +      P   VG + V   + ++    N             +D  
Sbjct: 12  DRFFLDMAVHVATASRD----PSTKVGCILVDEQRRLVGMGYNGFPRGVVDLPERYEDRP 67

Query: 51  T-----AHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLY 99
           T      HAE  A+           L     Y+T  PC+ CA  +  A ++R+ 
Sbjct: 68  TKYLMVQHAEANAVLQ----SPSNSLAGSTAYLTAPPCSNCAGLLIQAGVKRVV 117


>gi|58263382|ref|XP_569101.1| dCMP deaminase [Cryptococcus neoformans var. neoformans JEC21]
 gi|57223751|gb|AAW41794.1| dCMP deaminase, putative [Cryptococcus neoformans var. neoformans
           JEC21]
          Length = 273

 Score = 54.5 bits (131), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 24/120 (20%), Positives = 40/120 (33%), Gaps = 27/120 (22%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGN-----RNR------ELKDVTA 52
              FM+ A   A   +   +  VGA+ V + +I+S   N                 + +A
Sbjct: 127 DTYFMTLA-SLASERSNCMKRRVGALLVRSKRILSTGYNGTPRGTRNCNQGGCSRCNGSA 185

Query: 53  ------------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
                       HAE  A+    R    +   +  +Y    PC  C+  I    +R + Y
Sbjct: 186 RGGEALNECLCLHAEENALLEAGRERIGD---DSVIYCNTCPCLRCSVKIVQCGVREVVY 242


>gi|321252394|ref|XP_003192392.1| dCMP deaminase [Cryptococcus gattii WM276]
 gi|317458860|gb|ADV20605.1| dCMP deaminase, putative [Cryptococcus gattii WM276]
          Length = 327

 Score = 54.5 bits (131), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 24/120 (20%), Positives = 40/120 (33%), Gaps = 27/120 (22%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGN-----RNR------ELKDVTA 52
              FM+ A   A   +   +  VGA+ V + +I+S   N                 + +A
Sbjct: 181 DTYFMTLA-SLASERSNCMKRRVGALLVRSKRILSTGYNGTPRGTRNCNQGGCSRCNGSA 239

Query: 53  ------------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
                       HAE  A+    R    +   +  +Y    PC  C+  I    +R + Y
Sbjct: 240 RGGEALNECLCLHAEENALLEAGRERIGD---DSVIYCNTCPCLRCSVKIVQCGVREVVY 296


>gi|74216091|dbj|BAE23721.1| unnamed protein product [Mus musculus]
          Length = 150

 Score = 54.5 bits (131), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 31/112 (27%), Positives = 38/112 (33%), Gaps = 31/112 (27%)

Query: 5   NVFMSCALEEAQNAALRNEIP---VGAVAVL-NNKIISRAGN-RNRELKD------VTA- 52
             FM+ A   AQ +      P   VGA  V   NKI+    N       D       TA 
Sbjct: 23  EYFMAVAFLSAQRSKD----PSSQVGACIVNTENKIVGIGYNGMPNGCSDDLLPWRRTAE 78

Query: 53  -----------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLA 93
                      HAE+ AI       +   +    +YV L PC  CA  I  A
Sbjct: 79  NKLDTKYPYVCHAELNAIMN----KNSADVKGCSMYVALFPCNECAKLIIQA 126


>gi|307317155|ref|ZP_07596596.1| CMP/dCMP deaminase zinc-binding [Sinorhizobium meliloti AK83]
 gi|306897243|gb|EFN27988.1| CMP/dCMP deaminase zinc-binding [Sinorhizobium meliloti AK83]
          Length = 150

 Score = 54.5 bits (131), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 26/90 (28%), Positives = 33/90 (36%), Gaps = 16/90 (17%)

Query: 26  VGAVAV-LNNKIISRAGNRN-RELKD-------VT-----AHAEILAIRMGCRILSQEIL 71
           VGAV V    +I     N   R + D        T     +HAE   I    R   +  L
Sbjct: 25  VGAVLVGPEGEIRLTGYNGPPRGVNDTKMRRERPTKYLFASHAEANLIAFAAREGIRTKL 84

Query: 72  PEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
               +YVT  PC  CA  +  A I  +  G
Sbjct: 85  --CHVYVTHHPCAACARTLIQAGISCVVVG 112


>gi|222628465|gb|EEE60597.1| hypothetical protein OsJ_13992 [Oryza sativa Japonica Group]
          Length = 739

 Score = 54.5 bits (131), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 27/172 (15%), Positives = 49/172 (28%), Gaps = 60/172 (34%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNR--------------- 45
           M    V++   +E A+ AA                                         
Sbjct: 1   MDDDGVYIRWCVELARKAA--------------------GHTSPNPMVGCVVVRGGRVVG 40

Query: 46  -----ELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLAR 94
                E      HAE+ A+R       +++      YV+LEPC        C  A+  A+
Sbjct: 41  EGFHPEAGQP--HAEVFALRDA-----RDLAENATAYVSLEPCNHYGRTPPCTEALINAK 93

Query: 95  IRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQR--SRQIIQDF 144
           ++ +  G ++P       G +    A             E+    R + + +
Sbjct: 94  LKDVVVGMTDPNPIVASKGIERLQSAGIDVRV-----CMEEEALCRNLNEAY 140


>gi|73852493|ref|YP_293777.1| putative deoxycytidylate deaminase [Emiliania huxleyi virus 86]
 gi|72415209|emb|CAI65446.1| putative deoxycytidylate deaminase [Emiliania huxleyi virus 86]
          Length = 173

 Score = 54.5 bits (131), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 28/126 (22%), Positives = 46/126 (36%), Gaps = 34/126 (26%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAV--LNNKIISRAGN------------- 42
           +     FM  A    + +A+R++ P   VG+  +    NKIIS   N             
Sbjct: 18  ISWDQYFMGVA----KLSAMRSKDPSTQVGSCIIESKTNKIISIGYNGMPRGCNDDDFPW 73

Query: 43  -RNRELKDVTA-------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLAR 94
            +  +  ++         H+E  AI       +   +    +YVTL PC  C   I  + 
Sbjct: 74  GKKEKNSNILDTKYPFVVHSEANAILNA----NGTSVNGCTMYVTLFPCNECTKLIIQSG 129

Query: 95  IRRLYY 100
           I  + Y
Sbjct: 130 ICEIVY 135


>gi|325283968|ref|YP_004256509.1| CMP/dCMP deaminase zinc-binding protein [Deinococcus proteolyticus
           MRP]
 gi|324315777|gb|ADY26892.1| CMP/dCMP deaminase zinc-binding protein [Deinococcus proteolyticus
           MRP]
          Length = 142

 Score = 54.1 bits (130), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 27/118 (22%), Positives = 43/118 (36%), Gaps = 22/118 (18%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNR-----------ELKDVTAHAE 55
           M  A   A  +A   ++ VGA  +  +++++    N              +      HAE
Sbjct: 11  METARLWATRSADP-KVKVGACILDHHHRVVGVGYNGRAAGEPNERESLAQGASGFIHAE 69

Query: 56  ILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLA-RIRRLYYG---ASNPKGGG 109
           + A+                LYVT EPC  CA  I  + RI R+ +    A   + G 
Sbjct: 70  VNALLAA-----NWNGEGHTLYVTHEPCATCARLIVNSRRISRVLFAQNYAEEVRVGA 122


>gi|310792769|gb|EFQ28230.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Glomerella graminicola M1.001]
          Length = 473

 Score = 54.1 bits (130), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 29/122 (23%), Positives = 41/122 (33%), Gaps = 28/122 (22%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRN-RELKDVTA--------- 52
              FMS A E A   +   +  VGAV V    ++IS   N   R L++ +          
Sbjct: 314 DAYFMSLA-ELASLRSNCMKRRVGAVLVGREKRVISTGYNGTPRGLRNCSDGGCARCNSG 372

Query: 53  -------------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLY 99
                        HAE  A+    R   ++      LY    PC  C+  I    I  + 
Sbjct: 373 NSSGVGLSTCLCIHAEENALLEAGRERIRD---GAVLYCDTCPCLTCSIKICQVGIEEVV 429

Query: 100 YG 101
           Y 
Sbjct: 430 YA 431


>gi|331242125|ref|XP_003333709.1| CMP/dCMP deaminase family protein [Puccinia graminis f. sp. tritici
           CRL 75-36-700-3]
 gi|309312699|gb|EFP89290.1| CMP/dCMP deaminase family protein [Puccinia graminis f. sp. tritici
           CRL 75-36-700-3]
          Length = 169

 Score = 54.1 bits (130), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 31/157 (19%), Positives = 53/157 (33%), Gaps = 33/157 (21%)

Query: 8   MSCALEEAQNAALRNEIP----VGAVAVLNN--KIISRAGNRNRELKDVTAHAEILAIRM 61
           M  A+  A+       IP    VG +       +++S   +R  E      HAE  AI  
Sbjct: 13  MRKAIALARLCK---PIPTAFCVGCLMTKTGTGEVVSEGYSRELEGN---THAEQCAIMK 66

Query: 62  GCRILSQEI---LPEVDLYVTLEPCT-------MCAAAIS--------LARIRRLYYGAS 103
              +          ++DLY T+EPC+        CA  I           RI+ ++ G  
Sbjct: 67  LSPLDGPSSSMLAGDLDLYTTMEPCSIRLSGNKPCADLILQFNRSHHPHLRIKNIFLGVV 126

Query: 104 NPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQI 140
            P       G +    +      ++     ++   +I
Sbjct: 127 EPDDFVNCEGVKKLQDSGLT-IIQVVG--FKEECLRI 160


>gi|119493586|ref|ZP_01624250.1| Deoxycytidylate deaminase [Lyngbya sp. PCC 8106]
 gi|119452576|gb|EAW33759.1| Deoxycytidylate deaminase [Lyngbya sp. PCC 8106]
          Length = 181

 Score = 54.1 bits (130), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 29/128 (22%), Positives = 42/128 (32%), Gaps = 42/128 (32%)

Query: 4   GNVFMSCALEEAQNAALRNE---IPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
              F    L  A+ AA R+     PVGAV V + ++++   N        + H       
Sbjct: 15  DEYF----LMLAKLAATRSTCLAFPVGAVIVKDRQVVATGYN---GSPSGSVH----CTT 63

Query: 61  MG------CRILSQEILP----------------------EVDLYVTLEPCTMCAAAISL 92
            G          +   LP                         +YVTLEPC  C   +  
Sbjct: 64  QGYCYPGLSSCDASSSLPSRAVHAEANAIAQAAKHGISCGGSSIYVTLEPCVSCLKLVIS 123

Query: 93  ARIRRLYY 100
           A I+ +YY
Sbjct: 124 AGIKEVYY 131


>gi|283458202|ref|YP_003362820.1| pyrimidine reductase, riboflavin biosynthesis [Rothia mucilaginosa
           DY-18]
 gi|283134235|dbj|BAI65000.1| pyrimidine reductase, riboflavin biosynthesis [Rothia mucilaginosa
           DY-18]
          Length = 436

 Score = 54.1 bits (130), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 35/152 (23%), Positives = 56/152 (36%), Gaps = 20/152 (13%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M+ AL+ A+         VGAV    +  ++    +R       T H    A  +     
Sbjct: 64  MTLALQAARQGIRGANPLVGAVITDAHGHLLHVGYHR----GAGTPH--AEADALAAARA 117

Query: 67  SQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
           +   L    +YV+LEPC        C+ A++ A I  LYY  S+             +  
Sbjct: 118 AGTDLTGARMYVSLEPCNHTGRTGPCSHAVAEAGISELYYAYSDDTENAAGGAAYLRSQG 177

Query: 121 TCHHSPEIYPGISEQRSRQIIQDFF---KERR 149
              H+ E +       S Q+ + +F    ERR
Sbjct: 178 VTVHAMEEF----ANASYQLNERWFIAAAERR 205


>gi|288916305|ref|ZP_06410684.1| CMP/dCMP deaminase zinc-binding [Frankia sp. EUN1f]
 gi|288352284|gb|EFC86482.1| CMP/dCMP deaminase zinc-binding [Frankia sp. EUN1f]
          Length = 136

 Score = 54.1 bits (130), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 28/130 (21%), Positives = 43/130 (33%), Gaps = 37/130 (28%)

Query: 4   GNVFMSCALEEAQNAALRNE---IPVGAVAVLNNKIISRAGNRNRELK------------ 48
              F    L+ A+  A R +     VGAV V  +++ S   N     +            
Sbjct: 10  DTYF----LDIARAVAARGDCTRRQVGAVLVKGSRVRSTGYNGTAPGRPGCLAGACPRGR 65

Query: 49  -------------DVTA-HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLAR 94
                        D  A HAE  A+        ++      LY+T EPC  C   I  A 
Sbjct: 66  KTTVEVPAGSPYDDCIATHAEANALLYA---DGRQDTEGSTLYLTTEPCAWCQKLIRAAG 122

Query: 95  IRRLYY-GAS 103
           + ++ + G  
Sbjct: 123 VAQVVWPGCR 132


>gi|154173746|ref|YP_001408781.1| riboflavin biosynthesis protein RibD [Campylobacter curvus 525.92]
 gi|153793001|gb|EAT99582.2| riboflavin biosynthesis protein RibD [Campylobacter curvus 525.92]
          Length = 376

 Score = 54.1 bits (130), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 36/196 (18%), Positives = 53/196 (27%), Gaps = 65/196 (33%)

Query: 3   KGNVFMSCALEEAQNAALRNEIP---VGAVAV-LNNKIIS-RAGNRNRELKDVTAHAEIL 57
               +M  AL +A         P   VG V    N KI+S  A       K    HAE +
Sbjct: 2   NDEFYMQLALNKAWE-FQILTYPNPAVGCVITDRNGKILSCEAH-----KKAGCLHAEPM 55

Query: 58  AIRMGCRILSQEILP-------------------------------------------EV 74
           A+      LS E L                                              
Sbjct: 56  AVFFALCALSGEFLAKFLDAYGAKFSQNFSGLDELKSAELEPNFTYEFILAYHANLLKGA 115

Query: 75  DLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEI 128
             YVTLEPC        CA  +       +  GA +        G +       +    +
Sbjct: 116 KAYVTLEPCSHHGRTPPCAELLKRLNFGEVVIGARDENKIASG-GAEILK----NSGVRV 170

Query: 129 YPGISEQRSRQIIQDF 144
              + + ++ ++I  F
Sbjct: 171 KFDVLKDKALELIAPF 186


>gi|82701254|ref|YP_410820.1| cytidine/deoxycytidylate deaminase, zinc-binding region
           [Nitrosospira multiformis ATCC 25196]
 gi|82409319|gb|ABB73428.1| Cytidine/deoxycytidylate deaminase, zinc-binding region
           [Nitrosospira multiformis ATCC 25196]
          Length = 489

 Score = 54.1 bits (130), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 20/58 (34%), Positives = 23/58 (39%), Gaps = 2/58 (3%)

Query: 53  HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI 110
           HAE+ AI    R           LY T  PC  CA  I  A I ++ Y    PK   I
Sbjct: 338 HAEMEAIISAARNGISIR--GSTLYSTTYPCHNCAKHIVAAGISKVRYIEPYPKSYAI 393


>gi|146340245|ref|YP_001205293.1| hypothetical protein BRADO3265 [Bradyrhizobium sp. ORS278]
 gi|146193051|emb|CAL77062.1| hypothetical protein BRADO3265 [Bradyrhizobium sp. ORS278]
          Length = 290

 Score = 54.1 bits (130), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 19/56 (33%), Positives = 25/56 (44%), Gaps = 2/56 (3%)

Query: 51  TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPK 106
           T HAE  AI          +     +Y++  PC+ CA AI  + I RL   AS P 
Sbjct: 18  TEHAERNAIYKAAARGVSTL--GCTIYLSWFPCSDCARAIIQSGIERLICVASEPD 71


>gi|42524957|ref|NP_970337.1| hypothetical protein Bd3614 [Bdellovibrio bacteriovorus HD100]
 gi|39577168|emb|CAE80991.1| conserved hypothetical protein [Bdellovibrio bacteriovorus HD100]
          Length = 275

 Score = 54.1 bits (130), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 24/100 (24%), Positives = 40/100 (40%), Gaps = 11/100 (11%)

Query: 32  LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAIS 91
              +++S   N N   K+ T HAE+  ++   R   + I     LY T +PC MCA  I 
Sbjct: 180 DQGQLLSYGVNSN--SKNKTLHAEVNLVQRLHRETGRPIPAGAVLYSTHKPCKMCAGMIY 237

Query: 92  L-----ARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
                 ++++   Y +   KGG   +          +H  
Sbjct: 238 HWCEDPSQLK--VYYSVEEKGG--LSRQTVLDQHGLNHHI 273


>gi|222083057|ref|YP_002542422.1| deoxycytidylate deaminase family protein [Agrobacterium radiobacter
           K84]
 gi|221727736|gb|ACM30825.1| deoxycytidylate deaminase family protein [Agrobacterium radiobacter
           K84]
          Length = 201

 Score = 54.1 bits (130), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 19/89 (21%), Positives = 34/89 (38%), Gaps = 8/89 (8%)

Query: 16  QNAALRNEIPVGAVAVLNNK---IISRAGNRNRELKDVTAHAEILAIRMG--CRILSQEI 70
           +    R     GA  +  +    +++   N      +   H EI A++     + L +  
Sbjct: 27  RKGVSRGNKIFGAALLRKDDFSVVLAETNNETE---NPLWHGEIHALKRFFEQQPLGRPS 83

Query: 71  LPEVDLYVTLEPCTMCAAAISLARIRRLY 99
             ++    T EPC MC +AI+ A     Y
Sbjct: 84  TKDLIFLSTHEPCPMCLSAITWAGFDNFY 112


>gi|67616166|ref|XP_667464.1| cytidine and deoxycytidylate deaminase family [Cryptosporidium
           hominis TU502]
 gi|54658605|gb|EAL37236.1| cytidine and deoxycytidylate deaminase family [Cryptosporidium
           hominis]
          Length = 98

 Score = 54.1 bits (130), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 13/53 (24%), Positives = 25/53 (47%), Gaps = 1/53 (1%)

Query: 94  RIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
            I  ++YG  N + GG  +   +  L        +  GI E  S +I+++F++
Sbjct: 28  GIHNIFYGCKNYRFGGCGSVLDYRYLNRS-SKIILTSGICENESIKILKEFYE 79


>gi|168785539|ref|ZP_02810546.1| deoxycytidylate deaminase [Escherichia coli O157:H7 str. EC869]
 gi|261224156|ref|ZP_05938437.1| hypothetical protein EscherichiacoliO157_06068 [Escherichia coli
           O157:H7 str. FRIK2000]
 gi|261254766|ref|ZP_05947299.1| hypothetical protein EscherichiacoliO157EcO_02960 [Escherichia coli
           O157:H7 str. FRIK966]
 gi|189374383|gb|EDU92799.1| deoxycytidylate deaminase [Escherichia coli O157:H7 str. EC869]
          Length = 506

 Score = 54.1 bits (130), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 19/60 (31%), Positives = 25/60 (41%), Gaps = 2/60 (3%)

Query: 53  HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN 112
           HAE+ AI    R        +  +Y T  PC  CA  I  + I+R+ Y    PK    E 
Sbjct: 362 HAEMEAILACARTNIST--QDAYIYCTTFPCHNCAKHIIASGIKRVVYIEPYPKSKAYEF 419


>gi|260599407|ref|YP_003211978.1| hypothetical protein CTU_36150 [Cronobacter turicensis z3032]
 gi|260218584|emb|CBA33842.1| hypothetical protein CTU_36150 [Cronobacter turicensis z3032]
          Length = 415

 Score = 54.1 bits (130), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 28/107 (26%), Positives = 43/107 (40%), Gaps = 9/107 (8%)

Query: 10  CALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELK---DVTAHAEILAIRMGCRI 65
            A  +A +A  +    VG V + N   +++   N   E     D TAH E   I      
Sbjct: 12  EAANQAVHACCQGTFSVGGVMLDNTGYVLNALHNNVVEAGMTFDPTAHGERQLIDWYYDQ 71

Query: 66  LSQEIL----PEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGG 108
           LSQ  L      + +  +L+PC MC+ AI  +    +   A +   G
Sbjct: 72  LSQGALLPPPEAITIVTSLDPCCMCSGAILGSGF-NVVSAAFDTFSG 117


>gi|283851292|ref|ZP_06368574.1| CMP/dCMP deaminase zinc-binding [Desulfovibrio sp. FW1012B]
 gi|283573242|gb|EFC21220.1| CMP/dCMP deaminase zinc-binding [Desulfovibrio sp. FW1012B]
          Length = 153

 Score = 54.1 bits (130), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 29/127 (22%), Positives = 46/127 (36%), Gaps = 32/127 (25%)

Query: 5   NVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGN--------------RNRELK 48
             FM  A   A+ +    R    VGAVAV + +I++   N                 E+ 
Sbjct: 9   EYFMRIAYLVAERSTCLRRK---VGAVAVKDRRILATGYNGSPTGTAHCLDIGCLREEMG 65

Query: 49  DVTA---------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLY 99
             +          HAE   I   C +    I    D+Y T +PC +C   +   + R +Y
Sbjct: 66  IPSGERHELCRGLHAEQNVIIQ-CALHGVPI-AGADIYCTTQPCLICTKMLINCQARHIY 123

Query: 100 Y--GASN 104
           +  G  +
Sbjct: 124 FSQGYPD 130


>gi|218437707|ref|YP_002376036.1| CMP/dCMP deaminase zinc-binding [Cyanothece sp. PCC 7424]
 gi|218170435|gb|ACK69168.1| CMP/dCMP deaminase zinc-binding [Cyanothece sp. PCC 7424]
          Length = 185

 Score = 54.1 bits (130), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 25/128 (19%), Positives = 38/128 (29%), Gaps = 42/128 (32%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
              F+  A   A  +      PVGAV V + ++++   N        + H          
Sbjct: 12  DEYFLMIAKLAATRSTCLA-FPVGAVIVKDRQVLATGYN---GSPSGSVHC-------TA 60

Query: 64  RILSQEILPEVD-------------------------------LYVTLEPCTMCAAAISL 92
           +      L   D                               +YVTLEPC  C   I  
Sbjct: 61  QGFCYPGLSSCDASSTLPSRAVHAEANAIAQAAKHGINTNGASIYVTLEPCISCLKLIIS 120

Query: 93  ARIRRLYY 100
           A I+ ++Y
Sbjct: 121 AGIKEVFY 128


>gi|118602342|ref|YP_903557.1| CMP/dCMP deaminase, zinc-binding [Candidatus Ruthia magnifica str.
           Cm (Calyptogena magnifica)]
 gi|118567281|gb|ABL02086.1| CMP/dCMP deaminase, zinc-binding protein [Candidatus Ruthia
           magnifica str. Cm (Calyptogena magnifica)]
          Length = 148

 Score = 54.1 bits (130), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 27/118 (22%), Positives = 40/118 (33%), Gaps = 25/118 (21%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIP---VGAVAV-LNNKIISRA--------------GNR 43
           K    ++S A E +  +      P   VGA+ V    +++S+                N 
Sbjct: 6   KWDERYLSLAKEISTWSKD----PSTQVGAITVGQKKEVLSQGFNGFPRGIHDSDDRYNH 61

Query: 44  NRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEP-CTMCAAAISLARIRRLYY 100
                    HAE+ AI       S   L    LYV   P C  CA  I    I+++  
Sbjct: 62  RETKYQFVVHAEMNAIYNA--TYSGTSLDGATLYVYGLPICLECAKGIIQVGIKKVII 117


>gi|283481246|emb|CAZ69362.1| putative deoxycytidylate deaminase [Emiliania huxleyi virus 99B1]
          Length = 173

 Score = 53.8 bits (129), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 28/126 (22%), Positives = 47/126 (37%), Gaps = 34/126 (26%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLN--NKIISRAGN------------- 42
           +     FM  A    + +A+R++ P   VG+  + +  NKIIS   N             
Sbjct: 18  ISWDQYFMGVA----KLSAMRSKDPSTQVGSCIIESTTNKIISIGYNGMPRGCNDDDFPW 73

Query: 43  -RNRELKDVTA-------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLAR 94
            +  +  ++         H+E  AI       +   +    +YVTL PC  C   I  + 
Sbjct: 74  GKKEKNSNIINTKYPFVVHSEANAILNA----NGTSVNGCTMYVTLFPCNECTKLIIQSG 129

Query: 95  IRRLYY 100
           I  + Y
Sbjct: 130 ICEIVY 135


>gi|172057759|ref|YP_001814219.1| CMP/dCMP deaminase zinc-binding [Exiguobacterium sibiricum 255-15]
 gi|171990280|gb|ACB61202.1| CMP/dCMP deaminase zinc-binding [Exiguobacterium sibiricum 255-15]
          Length = 194

 Score = 53.8 bits (129), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 20/74 (27%), Positives = 30/74 (40%), Gaps = 5/74 (6%)

Query: 30  AVLNNKIISRAGNRNRE---LKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMC 86
            V N ++  R  N+       K    HAEI A+       +         YVT  PC  C
Sbjct: 84  IVHNGQVFYRCDNQEEHHEWSKMNEIHAEINALGKLAADSTSAR--HATAYVTHSPCHAC 141

Query: 87  AAAISLARIRRLYY 100
           + A+  ++I R+ Y
Sbjct: 142 SLALIASKIDRVVY 155


>gi|323304625|gb|EGA58388.1| Dcd1p [Saccharomyces cerevisiae FostersB]
          Length = 145

 Score = 53.8 bits (129), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 19/96 (19%), Positives = 27/96 (28%), Gaps = 24/96 (25%)

Query: 26  VGAVAVLNNKIISRAGN---------------------RNRELKDVTAHAEILAIRMGCR 64
           VG V V   ++I+   N                            +  HAE  A+    R
Sbjct: 18  VGCVIVRECRVIATGYNGTPRHLTNCFNGGCPRCNDGDSRNLHTCLCLHAEENALLEAGR 77

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
               +      LY    PC  C+  I    I  + Y
Sbjct: 78  DRVGQN---ATLYCDTCPCLTCSVKIVQTGISEVVY 110


>gi|118592805|ref|ZP_01550194.1| CMP/dCMP deaminase, zinc-binding protein [Stappia aggregata IAM
           12614]
 gi|118434575|gb|EAV41227.1| CMP/dCMP deaminase, zinc-binding protein [Stappia aggregata IAM
           12614]
          Length = 158

 Score = 53.8 bits (129), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 25/90 (27%), Positives = 31/90 (34%), Gaps = 19/90 (21%)

Query: 26  VGAVAVLNNKII-SRAGN---RNRELKDVTA-------------HAEILAIRMGCRILSQ 68
           VGAV V   + I +   N   R     D T              HAE  AI       + 
Sbjct: 30  VGAVIVGPGQEIRATGYNGLPRGVSGTDETRLDRPSGEKFFWVEHAERNAIYN--AARAG 87

Query: 69  EILPEVDLYVTLEPCTMCAAAISLARIRRL 98
             L    LYV   PC  CA AI  + +  +
Sbjct: 88  AALAGCTLYVNRFPCADCARAIIQSGLSCV 117


>gi|37524190|ref|NP_927534.1| hypothetical protein plu0168 [Photorhabdus luminescens subsp.
           laumondii TTO1]
 gi|36783613|emb|CAE12463.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii
           TTO1]
          Length = 399

 Score = 53.8 bits (129), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 20/63 (31%), Positives = 24/63 (38%), Gaps = 2/63 (3%)

Query: 53  HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN 112
           HAE+ AI    R           LY T  PC  CA  I  + IRR+ Y    PK    + 
Sbjct: 337 HAEMEAILACARSNISTH--NGILYCTTFPCHNCAKHIVASGIRRVVYIEPYPKSKAFDF 394

Query: 113 GTQ 115
              
Sbjct: 395 HPD 397


>gi|325475089|gb|EGC78275.1| deoxycytidylate deaminase [Treponema denticola F0402]
          Length = 168

 Score = 53.8 bits (129), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 23/120 (19%), Positives = 35/120 (29%), Gaps = 27/120 (22%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAG--------------NR----NR 45
              FM      A+ A        G V   +++I+                  ++      
Sbjct: 17  DEYFMDVCRAIAKRATCDRGR-SGCVIARDHQILVTGYVGAPTGLPHCDDVGHQFKKLQH 75

Query: 46  ELKDVTA------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLY 99
           E   +T       HAE  AI    +      +    LY  + PC  CA  I    I R+ 
Sbjct: 76  EDGSITQHCVRTVHAEQNAICQAAKRGIS--IDGATLYCKMTPCRTCAMLIINCGIVRVV 133


>gi|222872531|gb|EEF09662.1| predicted protein [Populus trichocarpa]
          Length = 93

 Score = 53.8 bits (129), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 20/80 (25%), Positives = 28/80 (35%), Gaps = 7/80 (8%)

Query: 8  MSCALEEAQNAALRNEIPVGAVAVLNNK--IISRAGNRNRELKDVTAHAEILAIRMGCRI 65
          +  A   A  A      P GA+ +  +   +++  GN      D   HAE    R     
Sbjct: 13 LRRAGAVAGRAMAMGRHPFGALLLAPDGETVLAEQGN-----IDTVNHAESTLARTAAAN 67

Query: 66 LSQEILPEVDLYVTLEPCTM 85
               L +  L  T EPC M
Sbjct: 68 YPGAYLAQCTLVTTFEPCAM 87


>gi|145224309|ref|YP_001134987.1| riboflavin biosynthesis protein RibD [Mycobacterium gilvum
          PYR-GCK]
 gi|315444641|ref|YP_004077520.1| riboflavin biosynthesis protein RibD [Mycobacterium sp. Spyr1]
 gi|145216795|gb|ABP46199.1| riboflavin biosynthesis protein RibD [Mycobacterium gilvum
          PYR-GCK]
 gi|315262944|gb|ADT99685.1| riboflavin biosynthesis protein RibD [Mycobacterium sp. Spyr1]
          Length = 333

 Score = 53.8 bits (129), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 23/92 (25%), Positives = 36/92 (39%), Gaps = 16/92 (17%)

Query: 8  MSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
          M+ A+ +++    R     PVGAV + ++  I+              HAE++A+R     
Sbjct: 7  MAAAIVQSERVKGRTYPNPPVGAVILDSDGEIA-GVGATAPTGGP--HAEVVALRRAG-- 61

Query: 66 LSQEILPEVDLYVTLEPC------TMCAAAIS 91
             E        VTLEPC        C  A+ 
Sbjct: 62 ---ERAAGGTAVVTLEPCNHFGRTPPCVDALI 90


>gi|116511986|ref|YP_809202.1| deoxycytidylate deaminase [Lactococcus lactis subsp. cremoris SK11]
 gi|125624228|ref|YP_001032711.1| hypothetical protein llmg_1416 [Lactococcus lactis subsp. cremoris
           MG1363]
 gi|116107640|gb|ABJ72780.1| Deoxycytidylate deaminase [Lactococcus lactis subsp. cremoris SK11]
 gi|124493036|emb|CAL97999.1| conserved hypothetical protein [Lactococcus lactis subsp. cremoris
           MG1363]
 gi|300071008|gb|ADJ60408.1| hypothetical protein LLNZ_07300 [Lactococcus lactis subsp. cremoris
           NZ9000]
          Length = 146

 Score = 53.8 bits (129), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 22/92 (23%), Positives = 31/92 (33%), Gaps = 19/92 (20%)

Query: 26  VGAVAVL-NNKIISRAGN----------------RNRELKDVTAHAEILAIRMGCRILSQ 68
           VGA+ V  N +++S   N                        T HAE  AI    +    
Sbjct: 32  VGALLVSPNGQLLSTGYNGAVSGMPHCTDIGCTEDKYGHCVATVHAEQNAIAQAAKHGVS 91

Query: 69  EILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
                  LY TL PC  C   +  A ++ + Y
Sbjct: 92  P--EGAILYTTLFPCLACLKLVVAAGVKEIKY 121


>gi|21229604|ref|NP_635521.1| deoxycytidylate deaminase [Xanthomonas campestris pv. campestris
           str. ATCC 33913]
 gi|66766481|ref|YP_241243.1| deoxycytidylate deaminase [Xanthomonas campestris pv. campestris
           str. 8004]
 gi|21111078|gb|AAM39445.1| deoxycytidylate deaminase [Xanthomonas campestris pv. campestris
           str. ATCC 33913]
 gi|66571813|gb|AAY47223.1| deoxycytidylate deaminase [Xanthomonas campestris pv. campestris
           str. 8004]
          Length = 150

 Score = 53.8 bits (129), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 24/90 (26%), Positives = 30/90 (33%), Gaps = 21/90 (23%)

Query: 26  VGAVAV-LNNKIISRAGN----------RNRELKDV----TAHAEILAIRMGCRILSQEI 70
           VGAV        +S   N               KDV      HAE+ AI           
Sbjct: 26  VGAVLFSKKGGNVSIGYNGFPIGVEDSAERLTDKDVKLELVVHAEVNAIIAAG-----VR 80

Query: 71  LPEVDLYVTLEP-CTMCAAAISLARIRRLY 99
                +YV  +P C  CA  I  A I+R+ 
Sbjct: 81  AEGSTIYVWGKPICARCAGPIIQAGIKRVV 110


>gi|319411601|emb|CBQ73645.1| related to DCD1-deoxycytidylate deaminase [Sporisorium reilianum]
          Length = 370

 Score = 53.8 bits (129), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 23/115 (20%), Positives = 33/115 (28%), Gaps = 42/115 (36%)

Query: 26  VGAVAVLNNKIISRAGN---------------RNRELKDVTA------------------ 52
           VGAV V +N+I++   N               R       +                   
Sbjct: 230 VGAVLVASNRILATGYNGTPSGLRNCNQGGCARCNNTLLPSHSSAVDGAARAGSSACGQN 289

Query: 53  -------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
                  HAE  A+    R   +       +Y    PC  CA  I    IR++ Y
Sbjct: 290 LDECLCLHAEENALLEAGR--GKIAAGGATMYCNTCPCLRCAVKIIQTGIRKVVY 342


>gi|171682182|ref|XP_001906034.1| hypothetical protein [Podospora anserina S mat+]
 gi|170941050|emb|CAP66700.1| unnamed protein product [Podospora anserina S mat+]
          Length = 167

 Score = 53.8 bits (129), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 24/94 (25%), Positives = 38/94 (40%), Gaps = 19/94 (20%)

Query: 3  KGNVFMSCALEEAQNAALRNEIP----VGAVAVL--NNKIISRAGNRNRELKDVTAHAEI 56
              +M  ALE+A+ +  +   P    VGAV V   +N+I++              HAE 
Sbjct: 8  DHKGYMQLALEQAKKSPPK---PTNYRVGAVIVDTASNEILATGYTLELPGN---THAEQ 61

Query: 57 LAIRMGCRILS--QEILPE-----VDLYVTLEPC 83
            +          +E L +     + LY T+EPC
Sbjct: 62 CCLLKLAEKHGVSEENLGDVLPTNLALYTTVEPC 95


>gi|42527696|ref|NP_972794.1| deoxycytidylate deaminase, putative [Treponema denticola ATCC
           35405]
 gi|41818524|gb|AAS12713.1| deoxycytidylate deaminase, putative [Treponema denticola ATCC
           35405]
          Length = 165

 Score = 53.8 bits (129), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 22/120 (18%), Positives = 32/120 (26%), Gaps = 27/120 (22%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAG---------------------- 41
              FM      A+ A        G V   +++I+                          
Sbjct: 14  DEYFMDVCRAIAKRATCDRGR-SGCVIARDHQILVTGYVGAPTGLPHCDDVGHQFKKLQH 72

Query: 42  --NRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLY 99
                 +    T HAE  AI    +      +    LY  + PC  CA  I    I R+ 
Sbjct: 73  EDGSVTQHCVRTVHAEQNAICQAAKRGIS--IDGATLYCKMTPCRTCAMLIINCGIVRVV 130


>gi|157953099|ref|YP_001497991.1| hypothetical protein NY2A_B795R [Paramecium bursaria Chlorella
           virus NY2A]
 gi|155123326|gb|ABT15194.1| hypothetical protein NY2A_B795R [Paramecium bursaria Chlorella
           virus NY2A]
          Length = 142

 Score = 53.8 bits (129), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 32/113 (28%), Positives = 44/113 (38%), Gaps = 16/113 (14%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISR-AGN-RNRELKDVTA------ 52
           M K   F S A   AQ  +   ++ V  + + NN  I+    N   R  ++ TA      
Sbjct: 1   MSKSEKFYSLACYHAQLFSKDPKMKVATMIIDNNNNIASVGYNGMPRGFEETTARWEKPN 60

Query: 53  ------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLY 99
                 HAE  AI    R  +   L    +  TL PC  CA  I  A IR++ 
Sbjct: 61  KYNYVVHAEANAIVTAAR--NGFRLDGCSIITTLFPCNECAKLIIQAGIRKVI 111


>gi|325963044|ref|YP_004240950.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase;
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Arthrobacter phenanthrenivorans Sphe3]
 gi|323469131|gb|ADX72816.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase;
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Arthrobacter phenanthrenivorans Sphe3]
          Length = 386

 Score = 53.4 bits (128), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 30/129 (23%), Positives = 43/129 (33%), Gaps = 18/129 (13%)

Query: 26  VGAVAVLNNKI-ISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84
           VGAV V      +    +R       TAH    A  +     +   L    + VTLEPC 
Sbjct: 50  VGAVVVDPGGRPLVTGFHR----GAGTAH--AEADAIAQAAAAGLDLTGCTMVVTLEPCN 103

Query: 85  M------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSR 138
                  CAAAI  A I  + Y   +P        T             +  G+    S 
Sbjct: 104 HVGRTGPCAAAIIAAGITDVVYAVDDPHDPAAGGATTLREA-----GVRVRSGLGATESL 158

Query: 139 QIIQDFFKE 147
            + + +F+ 
Sbjct: 159 DLNRQWFEA 167


>gi|154499104|ref|ZP_02037482.1| hypothetical protein BACCAP_03096 [Bacteroides capillosus ATCC
           29799]
 gi|150271944|gb|EDM99170.1| hypothetical protein BACCAP_03096 [Bacteroides capillosus ATCC
           29799]
          Length = 184

 Score = 53.4 bits (128), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 30/136 (22%), Positives = 43/136 (31%), Gaps = 41/136 (30%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGN---------------RNR 45
           + K N ++  A   A+ A        GA+ V N++II+   N                  
Sbjct: 21  IDKENYYLDIAETVAERATCLRRC-YGAIIVRNDEIIATGYNGAPRGRRNCVDLNYCTRE 79

Query: 46  ELKDVTA---------HAEILAIRMGCRILSQEILPEVDLYVTLE------------PCT 84
            L   +          HAE  AI    R    E L    LY+  +             C 
Sbjct: 80  ALNIPSGERYELCRSVHAEANAIISAAR---SETL-GATLYMACKNPATGELIAGSTSCA 135

Query: 85  MCAAAISLARIRRLYY 100
           MC   I  A I+R+  
Sbjct: 136 MCRRLIINAGIQRVVI 151


>gi|134099429|ref|YP_001105090.1| riboflavin-specific deaminase [Saccharopolyspora erythraea NRRL
           2338]
 gi|133912052|emb|CAM02165.1| riboflavin-specific deaminase [Saccharopolyspora erythraea NRRL
           2338]
          Length = 364

 Score = 53.4 bits (128), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 24/147 (16%), Positives = 43/147 (29%), Gaps = 35/147 (23%)

Query: 8   MSCALEEAQNAALRNEIP--------VGAVAVL-NNKIISRAGNRNRELKDVTAHAEILA 58
           M  A+          + P        VG V +  + +      +R         HAE+  
Sbjct: 1   MRRAIRL------TADPPRRTSPNPYVGCVVLDADGRFAGEGHHRGAGH----PHAEVE- 49

Query: 59  IRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIEN 112
                   +          VTLEPC        C  A+S A + R+ +   +P       
Sbjct: 50  ----ALAAAGGRAAGGTAVVTLEPCAHRGRTGPCTEALSAAGVSRVVFAVEDPTRDASGG 105

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQ 139
             +           E+  G+  + + +
Sbjct: 106 AERLAAG-----GVEVVGGLHREEAER 127


>gi|157953908|ref|YP_001498799.1| hypothetical protein AR158_C718R [Paramecium bursaria Chlorella
           virus AR158]
 gi|156068556|gb|ABU44263.1| hypothetical protein AR158_C718R [Paramecium bursaria Chlorella
           virus AR158]
          Length = 142

 Score = 53.4 bits (128), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 32/113 (28%), Positives = 44/113 (38%), Gaps = 16/113 (14%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISR-AGN-RNRELKDVTA------ 52
           M K   F S A   AQ  +   ++ V  + + NN  I+    N   R  ++ TA      
Sbjct: 1   MSKSEKFYSLACYHAQLFSKDPKMKVATMIIDNNNNIASVGYNGMPRGFEETTARWEKPN 60

Query: 53  ------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLY 99
                 HAE  AI    R  +   L    +  TL PC  CA  I  A IR++ 
Sbjct: 61  KYNYVVHAEANAIVTAAR--NGFRLDGCSIITTLFPCNECAKLIIQAGIRKVI 111


>gi|188587446|ref|YP_001918991.1| CMP/dCMP deaminase zinc-binding [Natranaerobius thermophilus
           JW/NM-WN-LF]
 gi|179352133|gb|ACB86403.1| CMP/dCMP deaminase zinc-binding [Natranaerobius thermophilus
           JW/NM-WN-LF]
          Length = 154

 Score = 53.4 bits (128), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 22/97 (22%), Positives = 31/97 (31%), Gaps = 25/97 (25%)

Query: 26  VGAVAVLNNKIISRAGN--------------RNRELKDVTA---------HAEILAIRMG 62
           VGAV V   +I++   N                 EL   +          HAE  AI   
Sbjct: 29  VGAVMVSERRILATGYNGAPQDLPHCSETGCLREELNVPSGERHEICRGLHAEQNAIIQS 88

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLY 99
                        LY T  PC++CA  +  A +  + 
Sbjct: 89  ALHGVTTR--GSTLYTTDFPCSLCAKMLVNAGVSEIV 123


>gi|291006182|ref|ZP_06564155.1| riboflavin-specific deaminase [Saccharopolyspora erythraea NRRL
           2338]
          Length = 385

 Score = 53.4 bits (128), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 24/147 (16%), Positives = 43/147 (29%), Gaps = 35/147 (23%)

Query: 8   MSCALEEAQNAALRNEIP--------VGAVAVL-NNKIISRAGNRNRELKDVTAHAEILA 58
           M  A+          + P        VG V +  + +      +R         HAE+  
Sbjct: 22  MRRAIRL------TADPPRRTSPNPYVGCVVLDADGRFAGEGHHRGAGH----PHAEVE- 70

Query: 59  IRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIEN 112
                   +          VTLEPC        C  A+S A + R+ +   +P       
Sbjct: 71  ----ALAAAGGRAAGGTAVVTLEPCAHRGRTGPCTEALSAAGVSRVVFAVEDPTRDASGG 126

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQ 139
             +           E+  G+  + + +
Sbjct: 127 AERLAAG-----GVEVVGGLHREEAER 148


>gi|15639266|ref|NP_218715.1| deoxycytidylate deaminase, putative [Treponema pallidum subsp.
           pallidum str. Nichols]
 gi|189025508|ref|YP_001933280.1| deoxycytidylate deaminase [Treponema pallidum subsp. pallidum SS14]
 gi|3322548|gb|AAC65262.1| deoxycytidylate deaminase, putative [Treponema pallidum subsp.
           pallidum str. Nichols]
 gi|189018083|gb|ACD70701.1| possible deoxycytidylate deaminase [Treponema pallidum subsp.
           pallidum SS14]
 gi|291059676|gb|ADD72411.1| dCMP deaminase [Treponema pallidum subsp. pallidum str. Chicago]
          Length = 166

 Score = 53.4 bits (128), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 25/120 (20%), Positives = 36/120 (30%), Gaps = 27/120 (22%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGN----------------RNREL 47
              FM      A+ A        G V   ++ ++                     R  + 
Sbjct: 14  DEYFMEVCHAIAKRATCDRGRA-GCVIARDHHLLVTGYAGAPRGLLHCDEHGHQLRTVQH 72

Query: 48  KDVTA--------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLY 99
           +D T         HAE  A+    R+     L    LY T+ PC  CA  I    I R+ 
Sbjct: 73  EDGTCTQHCVRTVHAEQNALCQAARLGIG--LEGATLYCTMTPCRTCAMLIINCGIVRVV 130


>gi|325983700|ref|YP_004296102.1| CMP/dCMP deaminase zinc-binding protein [Nitrosomonas sp. AL212]
 gi|325533219|gb|ADZ27940.1| CMP/dCMP deaminase zinc-binding protein [Nitrosomonas sp. AL212]
          Length = 532

 Score = 53.4 bits (128), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 19/59 (32%), Positives = 27/59 (45%), Gaps = 1/59 (1%)

Query: 53  HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIE 111
           HAE+ AI    R     +L    LY T  PC  CA  I  + I ++++    PK   +E
Sbjct: 381 HAEMDAITSVARTHKAGLLGG-TLYSTTFPCHSCARHIVASGINKVFFIEPYPKSLAME 438


>gi|313123056|ref|YP_004033315.1| deoxycytidylate deaminase [Lactobacillus delbrueckii subsp.
           bulgaricus ND02]
 gi|312279619|gb|ADQ60338.1| Deoxycytidylate deaminase [Lactobacillus delbrueckii subsp.
           bulgaricus ND02]
          Length = 148

 Score = 53.4 bits (128), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 25/113 (22%), Positives = 42/113 (37%), Gaps = 28/113 (24%)

Query: 8   MSCALEEAQN-----AALRNEIPVGAVAVLNNKIISRAGNRNRELKD------------- 49
           M  AL  AQ      A       VG+V V + +I+S   N +   +D             
Sbjct: 1   MMQALVIAQRSTCDRAL------VGSVLVKDKRILSTGYNGSVSGQDHCDDVGHQLVDGH 54

Query: 50  --VTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
              T H+E+ ++    +          ++YVT  PC  C   +  A + ++ Y
Sbjct: 55  CVRTIHSEMNSLISCAKNGVSTD--NTEIYVTHFPCYNCTKHLLQAGVIKINY 105


>gi|297569251|ref|YP_003690595.1| CMP/dCMP deaminase zinc-binding protein [Desulfurivibrio
           alkaliphilus AHT2]
 gi|296925166|gb|ADH85976.1| CMP/dCMP deaminase zinc-binding protein [Desulfurivibrio
           alkaliphilus AHT2]
          Length = 158

 Score = 53.4 bits (128), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 29/119 (24%), Positives = 43/119 (36%), Gaps = 26/119 (21%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGN--------------RNRELKDV 50
             FM+     AQ A       VGA+ V + +I++   N                 EL   
Sbjct: 12  EYFMAITDLVAQRATCVRRK-VGAILVRDRRIVATGYNGAPSGIRHCLEVGCLREELAVP 70

Query: 51  TA---------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
           +          HAE  AI      L    L    L+ T  PC++C+  +  A I ++YY
Sbjct: 71  SGERHELCRGLHAEQNAIIQAA--LHGVSLQSSMLFCTNMPCSICSKMLINAGITKIYY 127


>gi|147797438|emb|CAN60371.1| hypothetical protein VITISV_041263 [Vitis vinifera]
          Length = 587

 Score = 53.4 bits (128), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 22/109 (20%), Positives = 35/109 (32%), Gaps = 16/109 (14%)

Query: 4   GNVFMSCALEEAQN-AALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
            +  +  A E A   A   +  P  G V     K++             T  AE+ A+  
Sbjct: 24  DSFHVRRAAEIADKSAGFTSPHPNFGCVIATAGKVVGEGY----LYAQGTKPAEVQAVEA 79

Query: 62  GCRILSQEILPEVDLYVTLEP--CT---MCAAAISLARIRRLYYGASNP 105
              +           Y+ +EP  C       +A+  A I R   G  +P
Sbjct: 80  AGELC-----RGATAYLNMEPGDCHGDRTAVSALVKAGITRXVVGIRHP 123


>gi|155371691|ref|YP_001427225.1| hypothetical protein ATCV1_Z744R [Acanthocystis turfacea Chlorella
           virus 1]
 gi|155125011|gb|ABT16878.1| hypothetical protein ATCV1_Z744R [Acanthocystis turfacea Chlorella
           virus 1]
          Length = 122

 Score = 53.4 bits (128), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 28/105 (26%), Positives = 47/105 (44%), Gaps = 13/105 (12%)

Query: 8   MSC--ALEEAQNAALRNEIPV--GAVAVLNNKIISRAGNRNRELKDV-TAHAEILAIRMG 62
           M    A++EA + A + + P   G V +   K++S   N  R+     + HAE+ AI   
Sbjct: 1   MRLCEAIDEAISCAEQADQPFRHGCVIMSGKKMVSTGFNHVRKNIGTYSVHAEMDAI-WK 59

Query: 63  CRILSQEILPEVDLYVT-------LEPCTMCAAAISLARIRRLYY 100
               + + L  V + V+         PCTMC AA+    ++ + Y
Sbjct: 60  LNTDAYDNLKAVIVRVSKTGYLGNSRPCTMCMAALKQHGVKTIVY 104


>gi|298529750|ref|ZP_07017153.1| CMP/dCMP deaminase zinc-binding [Desulfonatronospira thiodismutans
           ASO3-1]
 gi|298511186|gb|EFI35089.1| CMP/dCMP deaminase zinc-binding [Desulfonatronospira thiodismutans
           ASO3-1]
          Length = 152

 Score = 53.4 bits (128), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 21/130 (16%), Positives = 47/130 (36%), Gaps = 28/130 (21%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGN--------------RNRE 46
           +     +M      ++ +     + VGA+AV + +I++   N                 E
Sbjct: 5   LSWDQYYMRITHLVSRRSTCLRRV-VGAMAVKDKRILATGYNGAPAGLEHCQDVGCLRDE 63

Query: 47  LKDVTA---------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRR 97
           +   +          HAE   I      +    +    +Y T +PC +C+  +    +++
Sbjct: 64  MGIPSGERHELCRGLHAEQNVIIQAA--IHGVSITGSFIYCTTQPCLICSKMLINCGVKK 121

Query: 98  LYY--GASNP 105
           +Y+  G  +P
Sbjct: 122 IYFSQGYPDP 131


>gi|15673123|ref|NP_267297.1| dCMP deaminase [Lactococcus lactis subsp. lactis Il1403]
 gi|281491636|ref|YP_003353616.1| dCMP deaminase [Lactococcus lactis subsp. lactis KF147]
 gi|12724103|gb|AAK05239.1|AE006346_8 dCMP deaminase [Lactococcus lactis subsp. lactis Il1403]
 gi|281375354|gb|ADA64867.1| dCMP deaminase [Lactococcus lactis subsp. lactis KF147]
 gi|326406687|gb|ADZ63758.1| dCMP deaminase [Lactococcus lactis subsp. lactis CV56]
          Length = 147

 Score = 53.0 bits (127), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 22/92 (23%), Positives = 31/92 (33%), Gaps = 19/92 (20%)

Query: 26  VGAVAVL-NNKIISRAGN----------------RNRELKDVTAHAEILAIRMGCRILSQ 68
           VGA+ V  N +++S   N                        T HAE  AI    +    
Sbjct: 33  VGALLVSPNGQLLSTGYNGAVSGMPHCTDIGCTEDKYGHCVATVHAEQNAIAQAAKHGVS 92

Query: 69  EILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
                  LY TL PC  C   +  A ++ + Y
Sbjct: 93  P--EGAILYTTLFPCLACLKLVVAAGVKEIKY 122


>gi|326404513|ref|YP_004284595.1| diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Acidiphilium multivorum AIU301]
 gi|325051375|dbj|BAJ81713.1| diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Acidiphilium multivorum AIU301]
          Length = 363

 Score = 53.0 bits (127), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 39/157 (24%), Positives = 50/157 (31%), Gaps = 25/157 (15%)

Query: 3   KGNVFMSCALEEAQNAALRNEI---P-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
                M  AL  A+      E    P VG V V       R   R R  +    HAE   
Sbjct: 2   DDLAHMRTALALARRGL--GETAPNPTVGCVIVRG----GRVVGRGRTAQGGRPHAETE- 54

Query: 59  IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIEN 112
                   + +       YVTLEPC        CA A+  A I R+    ++P       
Sbjct: 55  ----ALAAAGDAARGATAYVTLEPCAHHGRTPPCADALVAAGIARVVVAMTDPDERTNGA 110

Query: 113 GTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
           G      A      E+  GI    + +I   F K  R
Sbjct: 111 GLSRLREAGL----EVVEGIGGAEAAEINAGFCKCIR 143


>gi|162146949|ref|YP_001601410.1| riboflavin biosynthesis protein [Gluconacetobacter diazotrophicus
           PAl 5]
 gi|161785526|emb|CAP55097.1| Riboflavin biosynthesis protein [Gluconacetobacter diazotrophicus
           PAl 5]
          Length = 366

 Score = 53.0 bits (127), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 31/126 (24%), Positives = 50/126 (39%), Gaps = 19/126 (15%)

Query: 25  PVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83
           PVG   +    +I++ AG+          HAE LA+R        +        VTLEPC
Sbjct: 38  PVGCAILDARGEILTVAGHHRAGA----PHAEALALRQCAEQGLMDRAS--VAVVTLEPC 91

Query: 84  TM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRS 137
                   C+ AI  + IR ++ GA++P       G      A C     +Y  +  +  
Sbjct: 92  NHTGRTGPCSEAILASPIRTVWVGAADPNPRVAGGGAARLRAAGC----AVY--VLGEAG 145

Query: 138 RQIIQD 143
            +++ D
Sbjct: 146 GELLPD 151


>gi|104780798|ref|YP_607296.1| hypothetical protein PSEEN1634 [Pseudomonas entomophila L48]
 gi|95109785|emb|CAK14490.1| hypothetical protein PSEEN1634 [Pseudomonas entomophila L48]
          Length = 404

 Score = 53.0 bits (127), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 29/131 (22%), Positives = 47/131 (35%), Gaps = 19/131 (14%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLN--NKIISRAGNRNREL------------KDVTAH 53
           M    ++A  AA +    VG   + N   K++    N   +              D TAH
Sbjct: 1   MEQVADQAILAAQQGTFAVGGCIIENATGKVLVSMHNNVLQPYPGSNAQPPFLPHDPTAH 60

Query: 54  AEILAIRMGCRILSQEILPE---VDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG- 109
            E   ++       +  LPE   + +  TL+PC MCA ++  A    +   A +   G  
Sbjct: 61  GERQLVQWYYDNRHELKLPEPNQLTVVTTLDPCAMCAGSLLTAGF-NVAVSAIDTYAGVN 119

Query: 110 IENGTQFYTLA 120
             +   F T  
Sbjct: 120 YNSQFNFPTFP 130


>gi|321254023|ref|XP_003192936.1| hypothetical protein CGB_C6380W [Cryptococcus gattii WM276]
 gi|317459405|gb|ADV21149.1| hypothetical protein CNC04270 [Cryptococcus gattii WM276]
          Length = 647

 Score = 53.0 bits (127), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 23/129 (17%), Positives = 40/129 (31%), Gaps = 43/129 (33%)

Query: 44  NRELKDVTAHAEILAIRMGC--------------RILSQEILPEVDLYVTLEPCTMCAAA 89
                    HA +  +                  R  +  +L  + L+++ EPC MCA A
Sbjct: 497 RISESHPLRHATLNCVASIAHLRTVPPFTDVPPTRNGADYLLTSLSLFISHEPCVMCAMA 556

Query: 90  ISLARIRRLYYGASNPKGGGIE-----------------------------NGTQFYTLA 120
           +  +R+R ++Y     KGGG E                              G   +   
Sbjct: 557 LLHSRVREVFYVFPRRKGGGFEYNESDEHGDASPVHQHDEGSSLGEDISEQGGFGIHARR 616

Query: 121 TCHHSPEIY 129
             +H  E++
Sbjct: 617 DLNHRFEVW 625


>gi|328847991|gb|EGF97265.1| hypothetical protein MELLADRAFT_54347 [Melampsora larici-populina
           98AG31]
          Length = 295

 Score = 53.0 bits (127), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 24/119 (20%), Positives = 36/119 (30%), Gaps = 24/119 (20%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAV--LNNKIISRAGN-------RNRELKDV---- 50
              FM+ A   A   +   +  VGAV +   + +++S   N          E        
Sbjct: 152 DQYFMTLA-NLASLRSNCMKRRVGAVLITKRDKRVLSTGYNGTPRGMTNCNEGGCARFSK 210

Query: 51  ---------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
                      HAE  A+    R           LY    PC  C+  I    +R + Y
Sbjct: 211 CGTDLNECLCLHAEENALLEAGRDRMGAG-EGSTLYCNTCPCLRCSVKIVQCGVREVVY 268


>gi|297735254|emb|CBI17616.3| unnamed protein product [Vitis vinifera]
          Length = 586

 Score = 53.0 bits (127), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 22/109 (20%), Positives = 35/109 (32%), Gaps = 16/109 (14%)

Query: 4   GNVFMSCALEEAQN-AALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
            +  +  A E A   A   +  P  G V     K++             T  AE+ A+  
Sbjct: 24  DSFHVRRAAEIADKSAGFTSPHPNFGCVIATAGKVVGEGY----LYAQGTKPAEVQAVEA 79

Query: 62  GCRILSQEILPEVDLYVTLEP--CT---MCAAAISLARIRRLYYGASNP 105
              +           Y+ +EP  C       +A+  A I R   G  +P
Sbjct: 80  AGELC-----RGATAYLNMEPGDCHGDRTAVSALVKAGITRAVVGIRHP 123


>gi|148244449|ref|YP_001219143.1| deoxycytidylate deaminase [Candidatus Vesicomyosocius okutanii HA]
 gi|146326276|dbj|BAF61419.1| deoxycytidylate deaminase [Candidatus Vesicomyosocius okutanii HA]
          Length = 148

 Score = 53.0 bits (127), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 24/91 (26%), Positives = 32/91 (35%), Gaps = 18/91 (19%)

Query: 26  VGAVAV-LNNKIISRAGN--------------RNRELKDVTAHAEILAIRMGCRILSQEI 70
           VGAV V    +++S+  N                        HAE+ AI       S   
Sbjct: 29  VGAVTVGRKKEVLSQGFNGFPRGIHDTDERYHDREIKYKFVVHAEMNAIYNA--TYSGTS 86

Query: 71  LPEVDLYVTLEP-CTMCAAAISLARIRRLYY 100
           L    LYV   P C+ CA  I    I+R+  
Sbjct: 87  LDRATLYVYGLPICSECAKGIIQVGIKRVVI 117


>gi|215693340|dbj|BAG88722.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 404

 Score = 53.0 bits (127), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 27/172 (15%), Positives = 49/172 (28%), Gaps = 60/172 (34%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNR--------------- 45
           M    V++   +E A+ AA                                         
Sbjct: 83  MDDDGVYIRWCVELARKAA--------------------GHTSPNPMVGCVVVRGGRVVG 122

Query: 46  -----ELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLAR 94
                E      HAE+ A+R       +++      YV+LEPC        C  A+  A+
Sbjct: 123 EGFHPEAGQP--HAEVFALRDA-----RDLAENATAYVSLEPCNHYGRTPPCTEALINAK 175

Query: 95  IRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQR--SRQIIQDF 144
           ++ +  G ++P       G +    A             E+    R + + +
Sbjct: 176 LKDVVVGMTDPNPIVASKGIERLQSAGIDVRV-----CMEEEALCRNLNEAY 222


>gi|46128753|ref|XP_388930.1| hypothetical protein FG08754.1 [Gibberella zeae PH-1]
          Length = 167

 Score = 53.0 bits (127), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 30/122 (24%), Positives = 43/122 (35%), Gaps = 28/122 (22%)

Query: 8   MSCALEEAQNAALRNEIP----VGAVAVL--NNKIISRAGNRNRELKDVTAHAEILAIRM 61
           M  ALE A N+  +   P    VGA+ V   ++ II+              HAE   +  
Sbjct: 13  MQRALELANNSPPK---PTNFRVGALIVRLSDDTIIAEGYTLELPGN---THAEETCLMK 66

Query: 62  GCRILSQ--EILPE-----VDLYVTLEPC-------TMCAAAIS--LARIRRLYYGASNP 105
                    E L E       LY T+EPC         C   +    + I ++Y G   P
Sbjct: 67  LAEQYGTTEEKLSEVFNTPHALYTTVEPCFKRLSGKLPCVERVLRQKSWITQVYVGVQEP 126

Query: 106 KG 107
           + 
Sbjct: 127 ET 128


>gi|169611200|ref|XP_001799018.1| hypothetical protein SNOG_08708 [Phaeosphaeria nodorum SN15]
 gi|111062756|gb|EAT83876.1| hypothetical protein SNOG_08708 [Phaeosphaeria nodorum SN15]
          Length = 263

 Score = 53.0 bits (127), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 25/145 (17%), Positives = 40/145 (27%), Gaps = 51/145 (35%)

Query: 6   VFMSCALEEAQNAALRNEIPVGA---VAVLN--NKIISRAGNRNRELKDVTA-------- 52
            +M  A  EA         P  A   + V +  ++++ R  N      D T         
Sbjct: 44  KYMRLA-NEA-LFEQSGPCPFAAYGTIIVNHTSDEVVCRGANFR--TGDPTYDPSRRAIN 99

Query: 53  ---------HAEILAIRMGCRILSQEILPEVDLY-------------------------V 78
                    H EI AI     +     +    ++                          
Sbjct: 100 HILMFHFSIHGEISAINACTAVFQARNMTATQIFAAWADLSICTNAPSLPQNLLTPNADT 159

Query: 79  TLEPCTMCAAAISLARIRRLYYGAS 103
             E C MCA+AI  +  +   YG +
Sbjct: 160 NAESCPMCASAIRWSGFKEYIYGTT 184


>gi|78357476|ref|YP_388925.1| cytidine/deoxycytidylate deaminase family protein [Desulfovibrio
           desulfuricans subsp. desulfuricans str. G20]
 gi|78219881|gb|ABB39230.1| cytidine/deoxycytidylate deaminase family protein [Desulfovibrio
           desulfuricans subsp. desulfuricans str. G20]
          Length = 155

 Score = 53.0 bits (127), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 23/119 (19%), Positives = 41/119 (34%), Gaps = 26/119 (21%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGN--------------RNRELKDV 50
           + FM      A+ +       VGA+AV + +I++   N                 EL   
Sbjct: 9   HYFMDITYLVAERSTCTRRK-VGAIAVKDKRILATGYNGAPSNVAHCLDVGCLREELGVP 67

Query: 51  TA---------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
           +          HAE   I      +    L   ++Y T +PC +C   +    +  +Y+
Sbjct: 68  SGQRHEICRGLHAEQNVIIQAA--IHGVSLAGAEIYCTTQPCLICTKMLINCGVTAVYF 124


>gi|117928481|ref|YP_873032.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Acidothermus cellulolyticus 11B]
 gi|117648944|gb|ABK53046.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Acidothermus cellulolyticus 11B]
          Length = 366

 Score = 53.0 bits (127), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 23/115 (20%), Positives = 37/115 (32%), Gaps = 22/115 (19%)

Query: 26  VGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84
           VG V +    +++    +          HAE++         +        L VTLEPC 
Sbjct: 38  VGCVVLDAAGRVVGEGFHLRAGG----PHAEVV-----ALAAAGPAARGGTLVVTLEPCR 88

Query: 85  M------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGIS 133
                  C A I  A IRR+ Y  ++P                     ++  G+ 
Sbjct: 89  HVGRTGPCVAEIRRAGIRRVVYAVADP------TAAGGGGAELAAAGLDVVGGVL 137


>gi|294155321|ref|YP_003559705.1| deoxycytidylate deaminase fusion protein [Mycoplasma crocodyli
           MP145]
 gi|291599901|gb|ADE19397.1| deoxycytidylate deaminase fusion protein [Mycoplasma crocodyli
           MP145]
          Length = 159

 Score = 53.0 bits (127), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 36/146 (24%), Positives = 52/146 (35%), Gaps = 34/146 (23%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAV-LNNKIISRAGNRNRELKDV------ 50
           +     F    +  A+ ++LR++ P   VGA  +    K+I    N      D       
Sbjct: 5   INWDTYF----ISLAKISSLRSKDPSTQVGACIINSEKKVIGLGYNGMPNGNDKDFPWGR 60

Query: 51  ------------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98
                         HAE+ AI     + +        LY TL PC  CA  I  A I  +
Sbjct: 61  DGQSQKETKYPYVVHAEVNAI-----LNTTVQPKNAILYTTLFPCINCAKVIVQAGISEV 115

Query: 99  YYGASNPKGGGIENG-TQFYTLATCH 123
            Y   + K    E+G    Y L TC+
Sbjct: 116 IY--EDDKYHDTEDGEMSRYLLKTCN 139


>gi|316933997|ref|YP_004108979.1| CMP/dCMP deaminase zinc-binding protein [Rhodopseudomonas palustris
           DX-1]
 gi|315601711|gb|ADU44246.1| CMP/dCMP deaminase zinc-binding protein [Rhodopseudomonas palustris
           DX-1]
          Length = 531

 Score = 53.0 bits (127), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 19/54 (35%), Positives = 24/54 (44%), Gaps = 2/54 (3%)

Query: 53  HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPK 106
           HAE+ A+             +  LY T  PC MCA  I  A I+R+ Y    PK
Sbjct: 376 HAEMAAVCDAAMRGISVR--DSTLYCTTFPCHMCARHIIAAGIKRVVYIEPYPK 427


>gi|330814131|ref|YP_004358370.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Candidatus Pelagibacter sp. IMCC9063]
 gi|327487226|gb|AEA81631.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Candidatus Pelagibacter sp. IMCC9063]
          Length = 355

 Score = 53.0 bits (127), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 29/126 (23%), Positives = 48/126 (38%), Gaps = 19/126 (15%)

Query: 6   VFMSCALEEAQNA-ALRNEIP-VGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMG 62
            F   AL  A+    +  E P VG V    NN I+S         K+   HAE  A+   
Sbjct: 12  YFSELALSLARINKFITKENPSVGCVVTDFNNNILSSG----VTSKNGRPHAENNALIKL 67

Query: 63  CRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116
            + ++++      ++VTLEPC        C   I    +++L+    +       +G +F
Sbjct: 68  NKKITKK------IFVTLEPCNHYGKTPPCTKKIVNFNVKQLHCNQIDKNPAVNGSGLKF 121

Query: 117 YTLATC 122
                 
Sbjct: 122 LKENKI 127


>gi|311742370|ref|ZP_07716179.1| riboflavin biosynthesis protein RibD [Aeromicrobium marinum DSM
           15272]
 gi|311313998|gb|EFQ83906.1| riboflavin biosynthesis protein RibD [Aeromicrobium marinum DSM
           15272]
          Length = 344

 Score = 53.0 bits (127), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 32/137 (23%), Positives = 47/137 (34%), Gaps = 23/137 (16%)

Query: 8   MSCALEEAQNAALRNEIP-VGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRI 65
           M  AL+ A++       P VG V +  + + IS             AHAE+ A+      
Sbjct: 10  MRRALDLARDRGSCLPNPTVGCVLLDVHGEEISAG-----TTVPGGAHAEVEALTAAG-- 62

Query: 66  LSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
              E        VTLEPC        C  A+  A + R+    ++P       G +    
Sbjct: 63  ---ERARGATAVVTLEPCAHHGNTGPCVEALVGAGVARVVVAETDPNPVAAG-GVEALRR 118

Query: 120 ATCHHSPEIYPGISEQR 136
           A      E+  GI    
Sbjct: 119 AGL----EVETGILGDE 131


>gi|257456686|ref|ZP_05621876.1| dCMP deaminase [Treponema vincentii ATCC 35580]
 gi|257445879|gb|EEV20932.1| dCMP deaminase [Treponema vincentii ATCC 35580]
          Length = 163

 Score = 53.0 bits (127), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 22/120 (18%), Positives = 33/120 (27%), Gaps = 27/120 (22%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAG---------------------- 41
              FM      A+ A        G V   +N+++                          
Sbjct: 12  DEYFMEVCRAIAKRATCDRGR-SGCVIARDNQLLVTGYVGAPRGLPHCDDVGHQFKKVQH 70

Query: 42  --NRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLY 99
                 +    T HAE  AI    +      +    LY  + PC  CA  I    I+R+ 
Sbjct: 71  EDGSVSQHCVRTVHAEQNAICQAAKRGIS--IDGATLYCKMTPCRTCAMLIINCGIKRVI 128


>gi|302837985|ref|XP_002950551.1| hypothetical protein VOLCADRAFT_81171 [Volvox carteri f.
           nagariensis]
 gi|300264100|gb|EFJ48297.1| hypothetical protein VOLCADRAFT_81171 [Volvox carteri f.
           nagariensis]
          Length = 280

 Score = 52.6 bits (126), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 29/121 (23%), Positives = 44/121 (36%), Gaps = 35/121 (28%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGN-------------RNRELK----- 48
           M+ A   A+ +   N+  VGAV V  +N I++   N                 L      
Sbjct: 1   MALAFLSAERSKDPNKQ-VGAVIVNVDNIILAIGYNGFPRGCCDSDLPWAKEALSSDGNP 59

Query: 49  DVTA-------HAEILAI--RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLY 99
           D  A       HAE  A+  +    +          +YVT+ PC  CA  +  A +R + 
Sbjct: 60  DPLATKYPYVVHAEANALLNKNAASV------AGARVYVTMFPCNECAKLLIQAGVREVV 113

Query: 100 Y 100
           Y
Sbjct: 114 Y 114


>gi|70947235|ref|XP_743253.1| cytidine and deoxycytidylate deaminase family [Plasmodium
          chabaudi chabaudi]
 gi|56522661|emb|CAH77065.1| cytidine and deoxycytidylate deaminase family, putative
          [Plasmodium chabaudi chabaudi]
          Length = 169

 Score = 52.6 bits (126), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 3/58 (5%)

Query: 7  FMSCALEEAQNAA--LRNEIPVGAVAVLNNK-IISRAGNRNRELKDVTAHAEILAIRM 61
          F++ AL EA+ +      E+P+  + +   K I+S + N   E K+   H EI+AI  
Sbjct: 12 FLNQALNEAEKSLQVETKEMPIFCLLINEEKQIVSSSYNYTNEAKNGCRHCEIIAIDK 69


>gi|256827881|ref|YP_003156609.1| CMP/dCMP deaminase zinc-binding [Desulfomicrobium baculatum DSM
           4028]
 gi|256577057|gb|ACU88193.1| CMP/dCMP deaminase zinc-binding [Desulfomicrobium baculatum DSM
           4028]
          Length = 153

 Score = 52.6 bits (126), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 27/127 (21%), Positives = 46/127 (36%), Gaps = 30/127 (23%)

Query: 5   NVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGN--------------RNRELK 48
             FMS A   A+ +    R    VGA+AV + +I++   N                 +L 
Sbjct: 9   QYFMSIAYLVAERSTCLRRK---VGALAVKDKRILATGYNGAPAGLTHCLDLGCMREKLG 65

Query: 49  DVTA---------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLY 99
             +          HAE   I           +   D++ T +PC +CA  +   R+R ++
Sbjct: 66  IPSGQRHELCRALHAEQNVIIQAAIHGVG--IEGADIFCTTQPCILCAKMLINCRVRAIF 123

Query: 100 YGASNPK 106
           +    P 
Sbjct: 124 FAEGYPD 130


>gi|326326019|ref|YP_004250828.1| putative deoxycytidylate deaminase [Vibrio nigripulchritudo]
 gi|323669070|emb|CBJ93112.1| Putative deoxycytidylate deaminase [Vibrio nigripulchritudo]
          Length = 148

 Score = 52.6 bits (126), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 20/90 (22%), Positives = 30/90 (33%), Gaps = 21/90 (23%)

Query: 26  VGAVAV-LNNKIISRAGN--------------RNRELKDVTAHAEILAIRMGCRILSQEI 70
           VGAV        I+   N                    D+  HAE+ A+           
Sbjct: 26  VGAVLFSKKGGDITIGYNGFPFGVEDSVKRLQDKETKLDLVVHAEVNALIAAG-----SR 80

Query: 71  LPEVDLYVTLEP-CTMCAAAISLARIRRLY 99
                L+V  +P C+ CA  I  A ++R+ 
Sbjct: 81  ARGATLFVWGKPICSRCAGPIIQAGVKRVV 110


>gi|302918078|ref|XP_003052581.1| predicted protein [Nectria haematococca mpVI 77-13-4]
 gi|256733521|gb|EEU46868.1| predicted protein [Nectria haematococca mpVI 77-13-4]
          Length = 167

 Score = 52.6 bits (126), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 30/127 (23%), Positives = 43/127 (33%), Gaps = 28/127 (22%)

Query: 3   KGNVFMSCALEEAQNAALRNEIP----VGAVAVL--NNKIISRAGNRNRELKDVTAHAEI 56
               FM  AL +A ++  +   P    VGA+ V   +N II+              HAE 
Sbjct: 8   DHKAFMQRALGQANSSPPK---PTNFRVGALIVRLDDNTIIAEGYTLELPGN---THAEE 61

Query: 57  LAIRMGCRILSQ--EILPE-----VDLYVTLEPC-------TMCAAAIS--LARIRRLYY 100
             +           E L E       LY T+EPC         C   +      I ++Y 
Sbjct: 62  CCLLKLAEQHGTTEEKLSEVFNTPHALYTTVEPCFKRLSGKLPCVERVLRQKQWINKVYV 121

Query: 101 GASNPKG 107
           G   P+ 
Sbjct: 122 GVQEPET 128


>gi|154150170|ref|YP_001403788.1| CMP/dCMP deaminase, zinc-binding [Candidatus Methanoregula boonei
           6A8]
 gi|153998722|gb|ABS55145.1| CMP/dCMP deaminase, zinc-binding [Methanoregula boonei 6A8]
          Length = 162

 Score = 52.6 bits (126), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 27/136 (19%), Positives = 44/136 (32%), Gaps = 46/136 (33%)

Query: 2   KKGNVFMSCALEEAQNA--ALRNEIPVGAVAVLN-NKIISRAG-------------NRN- 44
            +   F+  A   A       RN    GA+ V   N I+S                NR  
Sbjct: 4   NRHQYFLDLAQRCANQGTCLRRN---FGAIIVDEYNTIVSTGYTGAPRKQMDCTELNRCW 60

Query: 45  RELKDVTA----------HAEILAIRMGCRILSQEILPEVDLYV------TLE-----PC 83
           R+  ++ +          HAE+ A+    ++          LY+      T E     PC
Sbjct: 61  RKDHNIPSGSNYERCRSVHAEMNAMLQAGKLA-----RGCTLYLAGFDVSTGELTQIWPC 115

Query: 84  TMCAAAISLARIRRLY 99
            +C+  I  + I  + 
Sbjct: 116 FLCSKMIVNSGITNVI 131


>gi|124265729|ref|YP_001019733.1| putative cytidine deaminase [Methylibium petroleiphilum PM1]
 gi|124258504|gb|ABM93498.1| putative cytidine deaminase [Methylibium petroleiphilum PM1]
          Length = 522

 Score = 52.6 bits (126), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 15/48 (31%), Positives = 20/48 (41%), Gaps = 2/48 (4%)

Query: 53  HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
           HAE+ AI    R      L    L  T  PC +CA  I  + I  + +
Sbjct: 373 HAEMAAITQAARAGVP--LAGTRLLCTTFPCHICARHIVASGIGEVVF 418


>gi|94312285|ref|YP_585495.1| CMP/dCMP deaminase, zinc-binding [Cupriavidus metallidurans CH34]
          Length = 209

 Score = 52.6 bits (126), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/100 (26%), Positives = 40/100 (40%), Gaps = 9/100 (9%)

Query: 53  HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN 112
           HAE+ AI    R      L    LY T  PC  CA  I  + I ++ Y    PK   ++ 
Sbjct: 57  HAEMDAIISVARANKAG-LNGGTLYATTFPCHSCARHIVASGITKVLYIEPYPKSLALDL 115

Query: 113 GTQFYTLATCHHSPEI----YPGISEQRSRQIIQDFFKER 148
                +    + S ++    Y G++    R ++  FF  R
Sbjct: 116 HRDAVSDDEAYKSSKVVFLQYSGVAP---RNMLT-FFSAR 151


>gi|254409948|ref|ZP_05023728.1| Cytidine and deoxycytidylate deaminase zinc-binding region domain
           protein [Microcoleus chthonoplastes PCC 7420]
 gi|196182984|gb|EDX77968.1| Cytidine and deoxycytidylate deaminase zinc-binding region domain
           protein [Microcoleus chthonoplastes PCC 7420]
          Length = 182

 Score = 52.6 bits (126), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 31/128 (24%), Positives = 44/128 (34%), Gaps = 42/128 (32%)

Query: 4   GNVFMSCALEEAQNAALRNE---IPVGAVAVLNNKIISRAGNRN---------------- 44
              F    L  A+ AA R+     PVGAV V N ++++   N +                
Sbjct: 12  DEYF----LMLAKLAATRSTCLAFPVGAVIVKNKQVLATGYNGSPAGSVHCTEQGYCYPG 67

Query: 45  RELKDVTAHAEILAIRMGCRILSQEIL------------PEVDLYVTLEPCTMCAAAISL 92
               DV+         M  R +  E               +  +YVTLEPC  C   I  
Sbjct: 68  LSSCDVSK-------DMPSRAVHAEANALAQAAKHGIATTDASIYVTLEPCLSCLKLIIS 120

Query: 93  ARIRRLYY 100
           A I  ++Y
Sbjct: 121 AGIHEVFY 128


>gi|304373629|ref|YP_003858374.1| Cd dCMP deaminase [Enterobacteria phage RB16]
 gi|299829585|gb|ADJ55378.1| Cd dCMP deaminase [Enterobacteria phage RB16]
          Length = 174

 Score = 52.6 bits (126), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 25/109 (22%), Positives = 37/109 (33%), Gaps = 36/109 (33%)

Query: 26  VGAVAVLNNKIISRAGNRNREL------------------------------KDVTAHAE 55
           VGAV V+N +++S+  N   +                                D   HAE
Sbjct: 23  VGAVIVMNGRVVSQGSNNTVDSDCRCADHNEHMLNDEGKLKAVHRPEHSAWSNDNEIHAE 82

Query: 56  ILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLA----RIRRLYY 100
           + A+       +  +L   +LY T  PC  CA  I        I  +YY
Sbjct: 83  MKALLSA--HTNGIMLNNAELYTTASPCPNCAKHIEWYVAIGAITAVYY 129


>gi|229915811|ref|YP_002884457.1| CMP/dCMP deaminase zinc-binding [Exiguobacterium sp. AT1b]
 gi|229467240|gb|ACQ69012.1| CMP/dCMP deaminase zinc-binding [Exiguobacterium sp. AT1b]
          Length = 191

 Score = 52.6 bits (126), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 21/72 (29%), Positives = 29/72 (40%), Gaps = 6/72 (8%)

Query: 53  HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI-- 110
           HAEI AI                 YVT  PC  C+ A+  AR+ R+ Y      G G+  
Sbjct: 113 HAEINAIGKLAA--DSTNAFGATAYVTHSPCHACSLALIAARVARVVYAVGYEHGDGLEL 170

Query: 111 --ENGTQFYTLA 120
             E+G +   + 
Sbjct: 171 MRESGIEVLHMP 182


>gi|320587839|gb|EFX00314.1| cytidine deoxycytidylate deaminase family protein [Grosmannia
           clavigera kw1407]
          Length = 217

 Score = 52.2 bits (125), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 17/91 (18%), Positives = 31/91 (34%), Gaps = 10/91 (10%)

Query: 16  QNAALRNEIPVGA-VAVLNN---KIISRAGNRNRELKDVTAHAEILAIRM--GCRILSQE 69
           +          GA V   +      ++     + E      H EI  I+        S+ 
Sbjct: 28  RAGVAAGSKVFGAAVLAKDGLAPHTVAT----SDERASPLLHGEINCIQAFFASPADSRP 83

Query: 70  ILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
              +   + T EPC++C + I+ +     YY
Sbjct: 84  RPSDCVFFCTHEPCSLCLSGITWSGFDEFYY 114


>gi|322830765|ref|YP_004210792.1| CMP/dCMP deaminase zinc-binding protein [Rahnella sp. Y9602]
 gi|321165966|gb|ADW71665.1| CMP/dCMP deaminase zinc-binding protein [Rahnella sp. Y9602]
          Length = 514

 Score = 52.2 bits (125), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 1/48 (2%)

Query: 53  HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
           HAE+ AI    R L+     +  LY T  PC  CA  I  A ++R+ Y
Sbjct: 368 HAEMDAITTMAR-LANASTCDKTLYCTTYPCHNCARHIVAAGLKRVVY 414


>gi|254438319|ref|ZP_05051813.1| Cytidine and deoxycytidylate deaminase zinc-binding region domain
           protein [Octadecabacter antarcticus 307]
 gi|198253765|gb|EDY78079.1| Cytidine and deoxycytidylate deaminase zinc-binding region domain
           protein [Octadecabacter antarcticus 307]
          Length = 509

 Score = 52.2 bits (125), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 18/54 (33%), Positives = 25/54 (46%), Gaps = 2/54 (3%)

Query: 53  HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPK 106
           HAE+ +I    R+     +    ++VT  PC  CA  I  A I RL +    PK
Sbjct: 374 HAEMNSISDAARL--GRRIQGATMHVTTFPCHNCAKHIIAAGISRLVFIEPYPK 425


>gi|312213591|emb|CBX93593.1| similar to tRNA-specific adenosine-34 deaminase subunit Tad3
           [Leptosphaeria maculans]
          Length = 430

 Score = 52.2 bits (125), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 36/158 (22%), Positives = 55/158 (34%), Gaps = 58/158 (36%)

Query: 12  LEEAQNAALR------NEIPVGAVAVLNN----KIISRAGNRN-------RELKDVT--- 51
           L  A+ A  +       E P+G   V +     +II+ AG+          E    T   
Sbjct: 222 LALAKLAGKQIAELSVGE-PLGVTVVDHTKPTPEIIAVAGDCRWRSPTGAVESHSGTGNV 280

Query: 52  -AHAEILAIRMGCRIL------------------------------------SQEILPEV 74
            AHA + AI M  +                                      S  +  ++
Sbjct: 281 MAHAVMRAIAMVAKKRLRVAGTDPAYLDRSLFCDSPLTQVEKTYYVKDNIASSGYLCVDL 340

Query: 75  DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN 112
           D+Y+T EPC MC+ AI  +R RR  +    P  GG+ +
Sbjct: 341 DIYLTNEPCVMCSMAILHSRFRRCVFSKRMPHTGGMTS 378


>gi|297815908|ref|XP_002875837.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297321675|gb|EFH52096.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 579

 Score = 52.2 bits (125), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 24/110 (21%), Positives = 37/110 (33%), Gaps = 17/110 (15%)

Query: 4   GNVFMSCALEEAQN-AALRNEIP-VGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIR 60
              F+  A + A+  A L +  P  G V    + K+              T  AE LA+ 
Sbjct: 31  DAAFIRRAADLAEMSAGLTSPHPNFGCVIATSSGKVAGEGY----LYAQGTKPAEALAVE 86

Query: 61  MGCRILSQEILPEVDLYVTLEP--CT---MCAAAISLARIRRLYYGASNP 105
                           Y+ +EP  C       +A+  A I R+  G  +P
Sbjct: 87  AAGEFS-----RGSTAYLNMEPGDCHGDHTAVSALVQAGIDRVVVGIRHP 131


>gi|328858134|gb|EGG07248.1| hypothetical protein MELLADRAFT_35707 [Melampsora larici-populina
           98AG31]
          Length = 341

 Score = 52.2 bits (125), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/126 (20%), Positives = 39/126 (30%), Gaps = 31/126 (24%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAV--LNNKIISRAGN---RNRELKD-------VT 51
              FM+ A   A   +   +  VGAV +   + +++S   N   R     +        T
Sbjct: 191 DQYFMTLA-NLASLRSNCMKRRVGAVLITKRDKRVLSTGYNGTPRGMTNCNEGGCARLGT 249

Query: 52  A-----------------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLAR 94
           A                 HAE  A+    R           LY    PC  C+  I    
Sbjct: 250 AAEVVSKCGTDLNECLCLHAEENALLEAGRDRMGAG-EGSTLYCNTCPCLRCSVKIVQCG 308

Query: 95  IRRLYY 100
           +R + Y
Sbjct: 309 VREVVY 314


>gi|260914510|ref|ZP_05920979.1| cytidine/deoxycytidylate deaminase [Pasteurella dagmatis ATCC
           43325]
 gi|260631611|gb|EEX49793.1| cytidine/deoxycytidylate deaminase [Pasteurella dagmatis ATCC
           43325]
          Length = 574

 Score = 52.2 bits (125), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 21/63 (33%), Positives = 25/63 (39%), Gaps = 2/63 (3%)

Query: 53  HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN 112
           HAE+ AI    R        E  LY T  PC  CA  I  + I R+ Y    PK   +E 
Sbjct: 424 HAEMEAILSCSREGIST--KEAILYCTTFPCHNCAKHIIASGINRVVYVEPYPKSKALEF 481

Query: 113 GTQ 115
              
Sbjct: 482 HND 484


>gi|289617324|emb|CBI56091.1| unnamed protein product [Sordaria macrospora]
          Length = 168

 Score = 52.2 bits (125), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 32/125 (25%), Positives = 46/125 (36%), Gaps = 28/125 (22%)

Query: 3   KGNVFMSCALEEAQNAALRNEIP----VGAVAVL--NNKIISRAGNRNRELKDVTAHAEI 56
               +M  AL  AQ +  +   P    VGAV V   +N I++       E      HAE 
Sbjct: 9   DHKAYMRLALSLAQKSPPK---PTNYRVGAVVVDVPSNTILATGYTLELEGN---THAEQ 62

Query: 57  LAIRMGCRILS------QEILP-EVDLYVTLEPC-------TMCAA-AISLAR-IRRLYY 100
                  +          E+LP  + LY T+EPC         C    + +A  I+ +Y 
Sbjct: 63  CCFMKLAQQHGVSEEKLAEVLPSNLALYTTVEPCSKRLSGNLPCVERVLRMAGCIKTVYV 122

Query: 101 GASNP 105
           G   P
Sbjct: 123 GILEP 127


>gi|222618852|gb|EEE54984.1| hypothetical protein OsJ_02599 [Oryza sativa Japonica Group]
          Length = 1434

 Score = 52.2 bits (125), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 20/79 (25%), Positives = 32/79 (40%), Gaps = 6/79 (7%)

Query: 10  CALEEAQNAALRN-EIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
            A+E ++         P GAV    ++K+I+   NR        AHAE +A  +  + L 
Sbjct: 814 LAIELSRLNVEHASGGPFGAVVFGPDDKVIAAGVNRVMPHATSLAHAENMAYMLAQQRLQ 873

Query: 68  QEILPE----VDLYVTLEP 82
              L      V L  + +P
Sbjct: 874 TPRLNAVLSPVTLATSSQP 892


>gi|163851292|ref|YP_001639335.1| CMP/dCMP deaminase zinc-binding [Methylobacterium extorquens PA1]
 gi|163662897|gb|ABY30264.1| CMP/dCMP deaminase zinc-binding [Methylobacterium extorquens PA1]
          Length = 488

 Score = 52.2 bits (125), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 18/54 (33%), Positives = 24/54 (44%), Gaps = 2/54 (3%)

Query: 53  HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPK 106
           HAE+ A+    R+     L    LY T  PC MCA  I  A +  + +    PK
Sbjct: 332 HAEMSALCDAARLGRP--LKSSRLYCTTFPCHMCAKHIVAAGVEEVVFLEPYPK 383


>gi|145344390|ref|XP_001416716.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144576942|gb|ABO95009.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 346

 Score = 52.2 bits (125), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 12/68 (17%), Positives = 32/68 (47%), Gaps = 4/68 (5%)

Query: 72  PEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIE--NGT-QFYTLATCHHSPEI 128
              D+++  EPC MCA  +  +R++R+ +   +   G +   +G  + + + + +H   +
Sbjct: 279 TGYDVFLAREPCIMCAMGLVHSRLKRVVFAVCDNINGALSGPSGIRRLHGVRSLNHHYSV 338

Query: 129 YPGISEQR 136
           +     + 
Sbjct: 339 FS-FDAEE 345


>gi|157953436|ref|YP_001498327.1| hypothetical protein AR158_C246R [Paramecium bursaria Chlorella
           virus AR158]
 gi|156068084|gb|ABU43791.1| hypothetical protein AR158_C246R [Paramecium bursaria Chlorella
           virus AR158]
          Length = 119

 Score = 51.8 bits (124), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 25/117 (21%), Positives = 43/117 (36%), Gaps = 28/117 (23%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNR-NRELKDVTAHAEILAI 59
           M + +  +S A+ +A  +        G V +   KII+   N   R++   + HAE+  +
Sbjct: 1   MTRLDEAVSIAINQANRS--TGNFRHGCVILSGKKIIAEGHNHMRRDIGTFSVHAEMDGL 58

Query: 60  RMGCRILSQEILPEVDLY----------------VTLEPCTMCAAAISLARIRRLYY 100
                      + + DLY                    PC MC AA+   +I  + Y
Sbjct: 59  ---------WKIYDSDLYDNLKAVIIRVTTTGKLANSRPCEMCMAALRQHKIETIVY 106


>gi|104780171|ref|YP_606669.1| deoxycytidylate deaminase [Pseudomonas entomophila L48]
 gi|95109158|emb|CAK13855.1| putative deoxycytidylate deaminase [Pseudomonas entomophila L48]
          Length = 575

 Score = 51.8 bits (124), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 19/69 (27%), Positives = 29/69 (42%), Gaps = 2/69 (2%)

Query: 53  HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN 112
           HAE+ A+    R+    +  +  LY T  PC  CA  I  A + R+ Y    PK    + 
Sbjct: 434 HAEMEALLSSSRVGVSAV--DSTLYCTTYPCHNCAKHIIAAGVERVVYVEPYPKSKAQKF 491

Query: 113 GTQFYTLAT 121
            +   +L  
Sbjct: 492 HSDSISLER 500


>gi|169603203|ref|XP_001795023.1| hypothetical protein SNOG_04610 [Phaeosphaeria nodorum SN15]
 gi|160706346|gb|EAT88370.2| hypothetical protein SNOG_04610 [Phaeosphaeria nodorum SN15]
          Length = 77

 Score = 51.8 bits (124), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 16/74 (21%), Positives = 33/74 (44%), Gaps = 11/74 (14%)

Query: 76  LYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISE- 134
           +Y TL PC MC  A  + +++R+  G +    GG +   +           E+   + + 
Sbjct: 1   MYTTLSPCDMCTGACVMYKVKRVVIGENKTFVGGEKYLQE--------RGIEVV--VLDN 50

Query: 135 QRSRQIIQDFFKER 148
           +    ++Q F +E+
Sbjct: 51  KDCHDLMQKFIREK 64


>gi|150396317|ref|YP_001326784.1| CMP/dCMP deaminase zinc-binding [Sinorhizobium medicae WSM419]
 gi|150027832|gb|ABR59949.1| CMP/dCMP deaminase zinc-binding [Sinorhizobium medicae WSM419]
          Length = 195

 Score = 51.8 bits (124), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 18/92 (19%), Positives = 35/92 (38%), Gaps = 6/92 (6%)

Query: 12  LEEAQNAALRNEIPVGAVAVLNNK---IISRAGNRNRELKDVTAHAEILAIRMGCRILSQ 68
           L+  +          GA  +  +    +++   N      +   H E+  ++    +  +
Sbjct: 19  LQLTEKGVAGGNKVFGAAILRKSDLSLVLAETNNETE---NPLWHGEVHTLKRFYEMAER 75

Query: 69  EILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
               E+    T EPC+MC +AI+ A     YY
Sbjct: 76  PDTRELIFLSTHEPCSMCLSAITWAGFDNFYY 107


>gi|306836172|ref|ZP_07469157.1| riboflavin biosynthesis protein RibD [Corynebacterium accolens ATCC
           49726]
 gi|304567955|gb|EFM43535.1| riboflavin biosynthesis protein RibD [Corynebacterium accolens ATCC
           49726]
          Length = 307

 Score = 51.8 bits (124), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 19/77 (24%), Positives = 29/77 (37%), Gaps = 15/77 (19%)

Query: 34  NKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM------CA 87
             ++     +        AHAE++A+R                 VTLEPC        CA
Sbjct: 6   GAVVGIGATQPVGG----AHAEVMALRAAGEKA-----RGGTAVVTLEPCAHTGRTGPCA 56

Query: 88  AAISLARIRRLYYGASN 104
            A+  A I R++Y   +
Sbjct: 57  TALIDAGIARVFYLHPD 73


>gi|302921194|ref|XP_003053238.1| predicted protein [Nectria haematococca mpVI 77-13-4]
 gi|256734178|gb|EEU47525.1| predicted protein [Nectria haematococca mpVI 77-13-4]
          Length = 177

 Score = 51.8 bits (124), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 34/126 (26%), Positives = 49/126 (38%), Gaps = 23/126 (18%)

Query: 3   KGNVFMSCALEEAQNA-ALRNEIPVGAVAVL--NNKIISRAGNR---NRELKDV-TAHAE 55
               FM  AL +AQ +    N+  VGA+ V     K++S   +         D  T HAE
Sbjct: 13  DHEAFMEFALIQAQKSPPAANKFCVGAILVDAAKGKVLSTGYSLEYPRDYKGDPGTTHAE 72

Query: 56  ILA-IRMGCRI-LSQEILPE-----VDLYVTLEPC-------TMCAAAI--SLARIRRLY 99
               I++     L +E + E       LY T+EPC         C   I    + I+ +Y
Sbjct: 73  QCCFIKIADEHNLPEERIHEVLPANTALYTTMEPCNERLSGNMTCTTRILRLQSAIKTVY 132

Query: 100 YGASNP 105
            G   P
Sbjct: 133 VGIKEP 138


>gi|239917588|ref|YP_002957146.1| riboflavin biosynthesis protein RibD [Micrococcus luteus NCTC 2665]
 gi|281413925|ref|ZP_06245667.1| riboflavin biosynthesis protein RibD [Micrococcus luteus NCTC 2665]
 gi|239838795|gb|ACS30592.1| riboflavin biosynthesis protein RibD [Micrococcus luteus NCTC 2665]
          Length = 377

 Score = 51.8 bits (124), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 32/119 (26%), Positives = 48/119 (40%), Gaps = 20/119 (16%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M  A+  A          VGAV      ++++   +R R     TAHAE+ A+       
Sbjct: 12  MDLAVHAALRGVRGANPLVGAVLTDEAGRVLAVGHHRGR----GTAHAEVDALARWRAAR 67

Query: 67  SQEILP------EVDLYVTLEPCTM------CAAAISLARIRRLYYGASNP---KGGGI 110
           + +          + L+VTLEPC        C+ A+  A I  L Y  ++P    GGG 
Sbjct: 68  AADPALAALDPAGLTLHVTLEPCDHTGSTGPCSQAVLDAEIGALRYAVADPTGHDGGGA 126


>gi|145505045|ref|XP_001438489.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124405661|emb|CAK71092.1| unnamed protein product [Paramecium tetraurelia]
          Length = 299

 Score = 51.8 bits (124), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 33/128 (25%), Positives = 42/128 (32%), Gaps = 32/128 (25%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNK-IISRAGNRN--------RELKDVT--- 51
              FM  A    Q +    +  VGAV + NNK I+S + N              DV    
Sbjct: 155 DVYFMKIAYTVKQRSNCMKKS-VGAVLINNNKRILSTSYNGTPKVMKNCNEGGCDVCKES 213

Query: 52  ------------AHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLY 99
                        HAE   I      L         LY TL PC  C  A+  A + R+ 
Sbjct: 214 QTLDLILYKCMCIHAEEGCILE----LGITQTRNTTLYTTLFPCVWCCKALLQAEVSRIV 269

Query: 100 Y---GASN 104
           Y   G  +
Sbjct: 270 YCEQGNWD 277


>gi|161869403|ref|YP_001598570.1| diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/phosphoribosylamino)uracil reductase
           [Neisseria meningitidis 053442]
 gi|161594956|gb|ABX72616.1| diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/phosphoribosylamino)uracil reductase
           [Neisseria meningitidis 053442]
          Length = 305

 Score = 51.8 bits (124), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 20/87 (22%), Positives = 33/87 (37%), Gaps = 13/87 (14%)

Query: 72  PEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHS 125
                +VTLEPC        CA A+  + + R+     +P       G      A     
Sbjct: 3   QGATAFVTLEPCSHYGRTPPCAEALLRSGVTRVVAAMRDPNPLVAGKGLAMLEAAGI--K 60

Query: 126 PEIYPGISEQRSRQIIQDF---FKERR 149
            E   G+ E ++R++ + F    + RR
Sbjct: 61  TEC--GLLEHQARELNRGFLSRIERRR 85


>gi|312197364|ref|YP_004017425.1| CMP/dCMP deaminase zinc-binding protein [Frankia sp. EuI1c]
 gi|311228700|gb|ADP81555.1| CMP/dCMP deaminase zinc-binding protein [Frankia sp. EuI1c]
          Length = 572

 Score = 51.8 bits (124), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 16/50 (32%), Positives = 22/50 (44%), Gaps = 2/50 (4%)

Query: 51  TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
           T HAE++AI    R      +    LY T  PC  C   I  + + R+ Y
Sbjct: 375 TTHAEMVAITSAARRGIA--IGGGTLYSTTLPCHECTRNIIASGLARVVY 422


>gi|320585958|gb|EFW98637.1| ribonuclease [Grosmannia clavigera kw1407]
          Length = 974

 Score = 51.8 bits (124), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 15/38 (39%), Positives = 24/38 (63%)

Query: 73  EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI 110
            ++LYVT EPC MC+ AI  +R+ ++ +    P  GG+
Sbjct: 383 GLELYVTHEPCAMCSMAILHSRMGKVVFANRMPLTGGL 420



 Score = 36.4 bits (84), Expect = 1.3,   Method: Composition-based stats.
 Identities = 16/72 (22%), Positives = 27/72 (37%), Gaps = 12/72 (16%)

Query: 7   FMSCALEEAQNAALRN-EIPVGAVAVLNNK-------IISRAGNRNR----ELKDVTAHA 54
           +M+ A + A  A        +GA  V           I+  A  + +    +  +  AHA
Sbjct: 202 WMALAHDIALKAKESGQGEALGACIVYRGNDGPRLVAIVGDARWQQQPKGSQTGNPMAHA 261

Query: 55  EILAIRMGCRIL 66
            + AI M  + L
Sbjct: 262 VLRAISMVAQKL 273


>gi|2358238|gb|AAB69099.1| dCMP deaminase [Mycobacterium phage D29]
          Length = 78

 Score = 51.8 bits (124), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 4/48 (8%)

Query: 53  HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
           HAE  A+        +E L    LYVT EPC  C+  I+ + I R+ Y
Sbjct: 31  HAEANAL----LYCDREDLIGATLYVTREPCYACSNLIAASGIERVVY 74


>gi|209544013|ref|YP_002276242.1| riboflavin biosynthesis protein RibD [Gluconacetobacter
           diazotrophicus PAl 5]
 gi|209531690|gb|ACI51627.1| riboflavin biosynthesis protein RibD [Gluconacetobacter
           diazotrophicus PAl 5]
          Length = 366

 Score = 51.8 bits (124), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 30/126 (23%), Positives = 49/126 (38%), Gaps = 19/126 (15%)

Query: 25  PVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83
           PVG   +    +I++ A +          HAE LA+R        +        VTLEPC
Sbjct: 38  PVGCAILDARGEILTVAAHHRAGA----PHAEALALRQCAEQGLMDRAS--VAVVTLEPC 91

Query: 84  TM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRS 137
                   C+ AI  + IR ++ GA++P       G      A C     +Y  +  +  
Sbjct: 92  NHTGRTGPCSEAILASPIRTVWVGAADPNPRVAGGGAARLRAAGC----AVY--VLGEAG 145

Query: 138 RQIIQD 143
            +++ D
Sbjct: 146 GELLPD 151


>gi|322711018|gb|EFZ02592.1| cytidine and deoxycytidylate deaminase [Metarhizium anisopliae
           ARSEF 23]
          Length = 168

 Score = 51.8 bits (124), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 28/126 (22%), Positives = 48/126 (38%), Gaps = 28/126 (22%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIP----VGAVAV--LNNKIISRAGNRNRELKDVTAHAE 55
           +     M  AL  A+ +  +   P    VGA+ V   + ++++          D   HAE
Sbjct: 7   QDHKTLMRRALALAEKSPPK---PSNFRVGALLVNLYDGRVVAEGYTL---ECDGNTHAE 60

Query: 56  ILA-IRMGCRILSQEI-LPEVD-----LYVTLEPC-------TMCAAAIS--LARIRRLY 99
               I++  +  ++E  L  +      LY T+EPC         C   +    + IR +Y
Sbjct: 61  ECCFIKLAEQHATKEEGLVGIIKTPHALYTTMEPCFKRLSGKLPCVERVLRQKSWIREVY 120

Query: 100 YGASNP 105
            G   P
Sbjct: 121 LGVQEP 126


>gi|167750332|ref|ZP_02422459.1| hypothetical protein EUBSIR_01306 [Eubacterium siraeum DSM 15702]
 gi|167656692|gb|EDS00822.1| hypothetical protein EUBSIR_01306 [Eubacterium siraeum DSM 15702]
 gi|291529903|emb|CBK95488.1| Deoxycytidylate deaminase [Eubacterium siraeum 70/3]
 gi|291556408|emb|CBL33525.1| Deoxycytidylate deaminase [Eubacterium siraeum V10Sc8a]
          Length = 163

 Score = 51.8 bits (124), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 23/108 (21%), Positives = 37/108 (34%), Gaps = 33/108 (30%)

Query: 26  VGAVAVLNNKIISRAGN-RNRELKDVTA-----------------------HAEILAIRM 61
            GA+ V N++II+   N   R LK+ +                        HAE   I  
Sbjct: 28  FGAIIVHNDEIIATGYNGAPRGLKNCSDLGICTREKLNVPKGQRYELCRSVHAEANCIIS 87

Query: 62  GCR--ILSQEILPEVDLYVTL-------EPCTMCAAAISLARIRRLYY 100
             R  ++   +        +        EPC+MC   I  A I+ ++ 
Sbjct: 88  ASRTDMIGSSLFLACHDMTSGGTLCGEVEPCSMCKRLIINAGIKDVFI 135


>gi|15965221|ref|NP_385574.1| hypothetical protein SMc01052 [Sinorhizobium meliloti 1021]
 gi|307309244|ref|ZP_07588912.1| conserved hypothetical protein [Sinorhizobium meliloti BL225C]
 gi|15074401|emb|CAC46047.1| Conserved hypothetical protein [Sinorhizobium meliloti 1021]
 gi|306900245|gb|EFN30862.1| conserved hypothetical protein [Sinorhizobium meliloti BL225C]
          Length = 195

 Score = 51.8 bits (124), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 17/88 (19%), Positives = 32/88 (36%), Gaps = 6/88 (6%)

Query: 16  QNAALRNEIPVGAVAVLNNK---IISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILP 72
           +          GA  +  +    +++   N      +   H E+  ++    +       
Sbjct: 23  EKGVADGNKVFGAAILRKSDLSLVLAETNNETE---NPLWHGEVHTLKRFYEMAETPDTR 79

Query: 73  EVDLYVTLEPCTMCAAAISLARIRRLYY 100
           E+    T EPC+MC +AI+ A     YY
Sbjct: 80  ELIFLSTHEPCSMCLSAITWAGFDNFYY 107


>gi|315645943|ref|ZP_07899064.1| CMP/dCMP deaminase zinc-binding protein [Paenibacillus vortex V453]
 gi|315278704|gb|EFU42018.1| CMP/dCMP deaminase zinc-binding protein [Paenibacillus vortex V453]
          Length = 172

 Score = 51.4 bits (123), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 29/145 (20%), Positives = 43/145 (29%), Gaps = 42/145 (28%)

Query: 4   GNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGN------------------ 42
              FM  A   +  +      P   VGAV V   K++  A N                  
Sbjct: 10  DTYFMDIAFMVSTRSQC----PRRHVGAVLVQGKKLLGTAYNGAPMGVPDCSEAGCMIAE 65

Query: 43  ---RNRELKD----------VTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAA 89
                 +              T HAE    +       +       +YVT EPC  CA  
Sbjct: 66  DYELVVQDGQERMVKKQRCIRTIHAE----QNLLLFTDRIDREGSTVYVTDEPCWTCANM 121

Query: 90  ISLARIRRLYYGASNPKGGGIENGT 114
           ++ + I  + +  S PK  G  +  
Sbjct: 122 LANSGIVEVVFHRSYPKDSGKVSRM 146


>gi|302415553|ref|XP_003005608.1| CMP/dCMP deaminase [Verticillium albo-atrum VaMs.102]
 gi|261355024|gb|EEY17452.1| CMP/dCMP deaminase [Verticillium albo-atrum VaMs.102]
          Length = 222

 Score = 51.4 bits (123), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 17/73 (23%), Positives = 30/73 (41%), Gaps = 6/73 (8%)

Query: 34  NKIISRAGNRNRELK------DVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCA 87
            KI+ +  NR    +      D T H EI   R   + L  +      +Y + E C MC+
Sbjct: 90  GKILHQDRNRTVTGRHGDGKPDSTYHPEIELARWAQQNLGADERAASVVYTSGEHCAMCS 149

Query: 88  AAISLARIRRLYY 100
            A +   + ++ +
Sbjct: 150 LAHAYCGLGKIVF 162


>gi|219112231|ref|XP_002177867.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217410752|gb|EEC50681.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 349

 Score = 51.4 bits (123), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 30/147 (20%), Positives = 55/147 (37%), Gaps = 33/147 (22%)

Query: 8   MSCALEEAQNAALRN--EIPVGAVAV--LNNKIISRAGNRN------RELKDVTAHAEIL 57
           M  AL    +       +IP GA+ V     ++++ +              +  A   + 
Sbjct: 181 MRHAL---TDVTAHGTIKIP-GAIVVFPDTGEVLATSTAERKYQESAERNPNPLATPILY 236

Query: 58  AIRMGCRI----------------LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
           AI+   R                   Q +   +D+Y TLEP    A A+  AR+R + +G
Sbjct: 237 AIQNVSRKERQSAISKGMDCPMFQRGQYLCTGLDVYTTLEPTVFEAMALVHARVRYVVFG 296

Query: 102 ASN--PKGGGIENGTQFYTLATCHHSP 126
            S+   + GG+ +  + + L   +H  
Sbjct: 297 CSSGTTQLGGL-SEVKVHDLPGTNHRY 322


>gi|171679239|ref|XP_001904566.1| hypothetical protein [Podospora anserina S mat+]
 gi|170939245|emb|CAP64473.1| unnamed protein product [Podospora anserina S mat+]
          Length = 230

 Score = 51.4 bits (123), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 29/133 (21%), Positives = 41/133 (30%), Gaps = 33/133 (24%)

Query: 3   KGNVFMSCALEEAQNAALRNEIP------VGAVAV--LNNKIISRAGNR---NRELKDV- 50
               +M  ALE+A+ +      P      VGA  V    N+++S   +         D  
Sbjct: 60  DHKTYMRYALEQAKLS-----PPSPSKFCVGAALVDADANQVLSTGYSEELARDRPNDPG 114

Query: 51  TAHAEILAIRMGCRILSQEIL-------PEVDLYVTLEPCT-------MCAAAISLAR-- 94
           + HAE                       P   LY T+EPC         C   I      
Sbjct: 115 STHAEHCCFIKVADENGIHDFDIAPVLPPNTVLYTTMEPCNERLSGNRTCVERILGLGSA 174

Query: 95  IRRLYYGASNPKG 107
           I+ +Y G   P  
Sbjct: 175 IKVVYVGIREPNT 187


>gi|289522489|ref|ZP_06439343.1| cytidine/deoxycytidylate deaminase domain protein [Anaerobaculum
           hydrogeniformans ATCC BAA-1850]
 gi|289504325|gb|EFD25489.1| cytidine/deoxycytidylate deaminase domain protein [Anaerobaculum
           hydrogeniformans ATCC BAA-1850]
          Length = 193

 Score = 51.4 bits (123), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 21/75 (28%), Positives = 34/75 (45%), Gaps = 3/75 (4%)

Query: 27  GAVAVLNN-KIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85
           GAV   ++  ++  A N   E ++   H EI  I     +       +     T EPC+M
Sbjct: 37  GAVLKADDLSLVVAATNH--EGENPIFHGEIYTILKFFELEDHPKPQDCIFLSTHEPCSM 94

Query: 86  CAAAISLARIRRLYY 100
           C +AI+ A   ++YY
Sbjct: 95  CLSAIAWAGFPKIYY 109


>gi|307322619|ref|ZP_07601956.1| CMP/dCMP deaminase zinc-binding [Sinorhizobium meliloti AK83]
 gi|306891739|gb|EFN22588.1| CMP/dCMP deaminase zinc-binding [Sinorhizobium meliloti AK83]
          Length = 195

 Score = 51.4 bits (123), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 17/88 (19%), Positives = 32/88 (36%), Gaps = 6/88 (6%)

Query: 16  QNAALRNEIPVGAVAVLNNK---IISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILP 72
           +          GA  +  +    +++   N      +   H E+  ++    +       
Sbjct: 23  EKGVADGNKVFGAAILRKSDLSLVLAETNNETE---NPLWHGEVHTLKRFYEMAETPDTR 79

Query: 73  EVDLYVTLEPCTMCAAAISLARIRRLYY 100
           E+    T EPC+MC +AI+ A     YY
Sbjct: 80  ELIFLSTHEPCSMCLSAITWAGFDNFYY 107


>gi|121715194|ref|XP_001275206.1| deoxycytidylate deaminase [Aspergillus clavatus NRRL 1]
 gi|119403363|gb|EAW13780.1| deoxycytidylate deaminase [Aspergillus clavatus NRRL 1]
          Length = 154

 Score = 51.4 bits (123), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 22/98 (22%), Positives = 28/98 (28%), Gaps = 26/98 (26%)

Query: 26  VGAVAVLNNKIISRAGN-------RNRELKDV----------------TAHAEILAIRMG 62
           VG V V   ++IS   N          E                      HAE  A+   
Sbjct: 18  VGCVLVRERRVISTGYNGTPRHLTNCNEGGCPRCNRGERGGVGLSTCLCLHAEENALLEA 77

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
            R   +E      LY    PC  C   I+   I  + Y
Sbjct: 78  GRERIRE---GSILYCDTCPCLTCTVKIAQVGISEVVY 112


>gi|149408294|ref|YP_001294573.1| hypothetical protein ORF065 [Pseudomonas phage M6]
          Length = 153

 Score = 51.4 bits (123), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 21/90 (23%), Positives = 30/90 (33%), Gaps = 20/90 (22%)

Query: 26  VGAVAVLNNKIISR-AGNRNRELKDVTA--------------HAEILAIRMGCRILSQEI 70
           VGAV V  N  ++    N      D +               HAEI A+      L    
Sbjct: 30  VGAVLVRPNNSVASTGFNGFPPGHDDSPELYADRGYKYQHVVHAEINAL----NFLGSPA 85

Query: 71  LPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
                LY +   C  C  A   A ++R+ +
Sbjct: 86  -TGFTLYTSFPCCPNCMEAAGKAGVKRVAF 114


>gi|192291698|ref|YP_001992303.1| CMP/dCMP deaminase zinc-binding [Rhodopseudomonas palustris TIE-1]
 gi|192285447|gb|ACF01828.1| CMP/dCMP deaminase zinc-binding [Rhodopseudomonas palustris TIE-1]
          Length = 504

 Score = 51.4 bits (123), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 2/54 (3%)

Query: 53  HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPK 106
           HAE+ AI    R      + +  L+ T  PC +CA  I  + I+++ +    PK
Sbjct: 348 HAEMSAISDAARKGLS--IADGILFTTTFPCHLCAKHIVASGIKKVIFLEPYPK 399


>gi|110635161|ref|YP_675369.1| CMP/dCMP deaminase, zinc-binding [Mesorhizobium sp. BNC1]
 gi|110286145|gb|ABG64204.1| CMP/dCMP deaminase, zinc-binding protein [Chelativorans sp. BNC1]
          Length = 198

 Score = 51.4 bits (123), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 15/80 (18%), Positives = 31/80 (38%), Gaps = 8/80 (10%)

Query: 26  VGAVAVLNNK---IISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILP--EVDLYVTL 80
            GA  +       +I+   N      +   H E+ A++    +  +      +     T 
Sbjct: 34  FGAAILRKRDLSLVIAETNNEIE---NPLWHGEMHALKRFYEMPKESRADTKDCIFLSTH 90

Query: 81  EPCTMCAAAISLARIRRLYY 100
           EPC++C +AI+ +     +Y
Sbjct: 91  EPCSLCLSAITWSGFDNFFY 110


>gi|326331887|ref|ZP_08198174.1| cytidine/deoxycytidylate deaminase family protein [Nocardioidaceae
           bacterium Broad-1]
 gi|325950384|gb|EGD42437.1| cytidine/deoxycytidylate deaminase family protein [Nocardioidaceae
           bacterium Broad-1]
          Length = 202

 Score = 51.4 bits (123), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 16/90 (17%), Positives = 34/90 (37%), Gaps = 8/90 (8%)

Query: 16  QNAALRNEIPVGAVAVLN---NKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILP 72
           +          GA  +     + +++   N      +   H EI AI+    + + +   
Sbjct: 28  RAGVAAGNKIFGAAILRRADLSVVVAETNNETE---NPLWHGEIHAIKRFFELPADDRPA 84

Query: 73  --EVDLYVTLEPCTMCAAAISLARIRRLYY 100
             +  L  T EPC++C + ++ + I    Y
Sbjct: 85  PGDCVLLATHEPCSLCLSGVAWSGIPEFAY 114


>gi|209524445|ref|ZP_03272994.1| CMP/dCMP deaminase zinc-binding [Arthrospira maxima CS-328]
 gi|209495236|gb|EDZ95542.1| CMP/dCMP deaminase zinc-binding [Arthrospira maxima CS-328]
          Length = 195

 Score = 51.4 bits (123), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 25/125 (20%), Positives = 37/125 (29%), Gaps = 36/125 (28%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM-- 61
              F+  A   A  +      PVGAV V + +I++   N        + H          
Sbjct: 29  DEYFLMFAKLAATRSTCLA-FPVGAVIVKDRQILATGYN---GSPSGSVH----CTTQGF 80

Query: 62  ---------GCRILSQEIL-----------------PEVDLYVTLEPCTMCAAAISLARI 95
                      + L    +                     +YVTLEPC  C   I    I
Sbjct: 81  CYPGLSSCDASQTLPSRAVHAEANAIAQAAKHGICCAGASIYVTLEPCIYCLKLIISTGI 140

Query: 96  RRLYY 100
           + +YY
Sbjct: 141 KEVYY 145


>gi|50119090|ref|YP_048257.1| putative deoxycytidylate deaminase [Pectobacterium atrosepticum
           SCRI1043]
 gi|49609616|emb|CAG73049.1| putative deoxycytidylate deaminase [Pectobacterium atrosepticum
           SCRI1043]
          Length = 526

 Score = 51.4 bits (123), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 17/63 (26%), Positives = 24/63 (38%), Gaps = 2/63 (3%)

Query: 53  HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN 112
           HAE+ AI    R        +  +Y T  PC  CA  I  + I ++ Y    PK    + 
Sbjct: 376 HAEMEAILSCARSEINTN--KATIYCTTFPCHNCAKHIVASGIEKVIYIEPYPKSKAFDF 433

Query: 113 GTQ 115
              
Sbjct: 434 HID 436


>gi|297197485|ref|ZP_06914882.1| cytidine/deoxycytidylate deaminase [Streptomyces sviceus ATCC
           29083]
 gi|197717632|gb|EDY61666.1| cytidine/deoxycytidylate deaminase [Streptomyces sviceus ATCC
           29083]
          Length = 125

 Score = 51.1 bits (122), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 23/107 (21%), Positives = 37/107 (34%), Gaps = 35/107 (32%)

Query: 1   MKKGNV-FMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILA 58
           MK   + ++   +E A  A    + P G+V V    +I++   NR               
Sbjct: 1   MKDTELPYLRRWVEPAAEALEAGDEPFGSVLVGAEGEILAEDHNRV-------------- 46

Query: 59  IRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNP 105
                               + E C MCAAA +   + R+ Y AS+ 
Sbjct: 47  -------------------ASGEHCRMCAAAHAWVGLGRIVYVASSE 74


>gi|167946682|ref|ZP_02533756.1| bifunctional GMP synthase/glutamine amidotransferase protein
          [Endoriftia persephone 'Hot96_1+Hot96_2']
          Length = 51

 Score = 51.1 bits (122), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 16/44 (36%), Positives = 24/44 (54%)

Query: 2  KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNR 45
          ++ + FM CAL  A  A    E+PVGA+ V + ++I    NR  
Sbjct: 5  EQDHHFMQCALALAARAEAVGEVPVGALLVRDGEVIGEGWNRPI 48


>gi|295694775|ref|YP_003588013.1| CMP/dCMP deaminase zinc-binding protein [Bacillus tusciae DSM 2912]
 gi|295410377|gb|ADG04869.1| CMP/dCMP deaminase zinc-binding protein [Bacillus tusciae DSM 2912]
          Length = 172

 Score = 51.1 bits (122), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 30/131 (22%), Positives = 39/131 (29%), Gaps = 45/131 (34%)

Query: 4   GNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGN-----------------R 43
              FM  A   A  A      P   VGAV V + K++  A N                  
Sbjct: 13  DFYFMDIAYMAATRATC----PRRQVGAVLVQDRKLMGSAYNGAPAGVTDCYEGGCLLVD 68

Query: 44  NRELKDV-----------TAHAEILAI---RMGCRILSQEILPEVDLYVTLEPCTMCAAA 89
             E               T HAE   I       R+          +YVT  PC  CA  
Sbjct: 69  VYEKNAAGEIVQKQHCIRTIHAEQNLILFTDRAQRL-------GSTVYVTDSPCWTCANM 121

Query: 90  ISLARIRRLYY 100
           ++ + I  + Y
Sbjct: 122 LANSGIAEIVY 132


>gi|198464653|ref|XP_001353310.2| GA19978 [Drosophila pseudoobscura pseudoobscura]
 gi|198149816|gb|EAL30813.2| GA19978 [Drosophila pseudoobscura pseudoobscura]
          Length = 159

 Score = 51.1 bits (122), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 25/99 (25%), Positives = 33/99 (33%), Gaps = 28/99 (28%)

Query: 26  VGAVAVLNNK-IISRAGN----------------RNRELKDVT-------AHAEILAIRM 61
           VGA  V   K I++   N                      D          HAE  AI  
Sbjct: 18  VGACIVDQQKRIVAIGYNGLPRNCSDDEFPWSKLSKNSSPDSLEEKKLYVVHAEANAILN 77

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
                +   L    LY TL PC  CA  I  + I++++Y
Sbjct: 78  ----SNGGSLVGTCLYTTLFPCNECAKLIIQSGIQKVFY 112


>gi|195160343|ref|XP_002021035.1| GL25124 [Drosophila persimilis]
 gi|194118148|gb|EDW40191.1| GL25124 [Drosophila persimilis]
          Length = 159

 Score = 51.1 bits (122), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 25/99 (25%), Positives = 33/99 (33%), Gaps = 28/99 (28%)

Query: 26  VGAVAVLNNK-IISRAGN----------------RNRELKDVT-------AHAEILAIRM 61
           VGA  V   K I++   N                      D          HAE  AI  
Sbjct: 18  VGACIVDQQKRIVAIGYNGLPRNCSDDEFPWSKLSKNSSPDSLEEKKLYVVHAEANAILN 77

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
                +   L    LY TL PC  CA  I  + I++++Y
Sbjct: 78  ----SNGGSLVGTCLYTTLFPCNECAKLIIQSGIQKVFY 112


>gi|255325997|ref|ZP_05367085.1| riboflavin biosynthesis protein RibD [Rothia mucilaginosa ATCC
           25296]
 gi|255296888|gb|EET76217.1| riboflavin biosynthesis protein RibD [Rothia mucilaginosa ATCC
           25296]
          Length = 436

 Score = 51.1 bits (122), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 29/127 (22%), Positives = 46/127 (36%), Gaps = 13/127 (10%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
           M+ AL+ A+         VGAV    +  ++    +R       T H    A  +     
Sbjct: 64  MTLALQAARQGIRGANPLVGAVITDAHGHLLHVGYHR----GAGTPH--AEADALAAARA 117

Query: 67  SQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120
           +   L    +YV+LEPC        C+ A++ A I  LYY  S+             +  
Sbjct: 118 AGTDLTGARMYVSLEPCNHTGRTGPCSHAVAEAGINELYYAYSDDTENAAGGAAYLRSQG 177

Query: 121 TCHHSPE 127
              H+ E
Sbjct: 178 VTVHAME 184


>gi|90423278|ref|YP_531648.1| cytidine/deoxycytidylate deaminase, zinc-binding region
           [Rhodopseudomonas palustris BisB18]
 gi|90105292|gb|ABD87329.1| cytidine/deoxycytidylate deaminase, zinc-binding region
           [Rhodopseudomonas palustris BisB18]
          Length = 522

 Score = 51.1 bits (122), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 18/54 (33%), Positives = 25/54 (46%), Gaps = 2/54 (3%)

Query: 53  HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPK 106
           HAE+ AI    R L  +I     L+ T  PC +CA  I  + I  + +    PK
Sbjct: 376 HAEMSAITDAAR-LGIKIKSG-TLFCTTFPCHICAKHIVASGIDTVVFLEPYPK 427


>gi|302534595|ref|ZP_07286937.1| gp20 [Streptomyces sp. C]
 gi|302443490|gb|EFL15306.1| gp20 [Streptomyces sp. C]
          Length = 117

 Score = 51.1 bits (122), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 18/47 (38%), Positives = 19/47 (40%), Gaps = 4/47 (8%)

Query: 53  HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLY 99
           HAE  AI           L    LYVT  PC  C   I  A IRR+ 
Sbjct: 73  HAEANAIHHA----DPTQLRGSTLYVTRMPCPACTTLIRSAGIRRVV 115


>gi|126439729|ref|YP_001057194.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia
           pseudomallei 668]
 gi|126219222|gb|ABN82728.1| cytidine/deoxycytidylate deaminase family protein [Burkholderia
           pseudomallei 668]
          Length = 591

 Score = 51.1 bits (122), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 19/48 (39%), Positives = 23/48 (47%), Gaps = 1/48 (2%)

Query: 53  HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
           HAE+ AI    RI     +    LY T  PC  CA  I  A I+ +YY
Sbjct: 439 HAEMHAIINAGRISGA-NIVNSSLYCTTYPCHSCARHIVAAGIKAIYY 485


>gi|218888180|ref|YP_002437501.1| CMP/dCMP deaminase zinc-binding [Desulfovibrio vulgaris str.
           'Miyazaki F']
 gi|218759134|gb|ACL10033.1| CMP/dCMP deaminase zinc-binding [Desulfovibrio vulgaris str.
           'Miyazaki F']
          Length = 182

 Score = 51.1 bits (122), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 24/125 (19%), Positives = 41/125 (32%), Gaps = 26/125 (20%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGN--------------RNRELKDV 50
             FM      A+ +       VGA+AV + +I++   N                 +L   
Sbjct: 11  QYFMEITYLVAERSTCTRRK-VGAIAVKDKRILATGYNGAPSGVAHCLDVGCLRTQLGVP 69

Query: 51  TA---------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
           +          HAE   I      +    L   ++Y T +PC +C   +    +  + Y 
Sbjct: 70  SGQRHEICRGLHAEQNVIVQAA--IHGISLAGSEIYCTTQPCLICTKMLINCGVTAIRYA 127

Query: 102 ASNPK 106
            S P 
Sbjct: 128 ESYPD 132


>gi|304403907|ref|ZP_07385569.1| CMP/dCMP deaminase zinc-binding [Paenibacillus curdlanolyticus YK9]
 gi|304346885|gb|EFM12717.1| CMP/dCMP deaminase zinc-binding [Paenibacillus curdlanolyticus YK9]
          Length = 176

 Score = 51.1 bits (122), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 27/134 (20%), Positives = 41/134 (30%), Gaps = 36/134 (26%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNR-------------------- 43
              FM  A   A  +       VGAV V   K++  A N                     
Sbjct: 14  DTYFMDIAYMVATRSRCNRRH-VGAVLVQGKKLLGTAYNGAPMGVEDCLEAGCMIVEEYE 72

Query: 44  -----------NRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISL 92
                       +E    T HAE    +       +       +YVT +PC  CA  ++ 
Sbjct: 73  LSAVEGTERMIKKERCIRTIHAE----QNLLLFTDRIDREGSTVYVTDQPCWTCANMLAN 128

Query: 93  ARIRRLYYGASNPK 106
           + +R + +    PK
Sbjct: 129 SGVREIVFHRPYPK 142


>gi|149194675|ref|ZP_01871770.1| Deoxycytidylate deaminase [Caminibacter mediatlanticus TB-2]
 gi|149135098|gb|EDM23579.1| Deoxycytidylate deaminase [Caminibacter mediatlanticus TB-2]
          Length = 610

 Score = 51.1 bits (122), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 20/91 (21%), Positives = 32/91 (35%), Gaps = 7/91 (7%)

Query: 41  GNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
            N+         HAE  A     +  S E + +  LY T  PC +C+       I+R+ Y
Sbjct: 493 YNQVHTRA---LHAEENAFLQLAKYGSGESIIDGTLYSTASPCELCSKKAYQLGIKRIIY 549

Query: 101 GASNPKGGGIENGTQFYTLATCHHSPEIYPG 131
              +P  G  +               E++ G
Sbjct: 550 --IDPYPGIAK--ENILQSGEHPPKIELFTG 576


>gi|33322616|gb|AAQ07040.1|AF496357_2 deoxycytidylate deaminase [Lactobacillus delbrueckii subsp. lactis]
          Length = 108

 Score = 51.1 bits (122), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 23/103 (22%), Positives = 39/103 (37%), Gaps = 18/103 (17%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKD--------------- 49
             FM  AL  AQ +     + VG+V V + +I+S   N +   +D               
Sbjct: 9   QYFMMQALVIAQRSTCDRAL-VGSVLVKDKRILSTGYNGSVSGQDHCDDVGHQLVDGHCV 67

Query: 50  VTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISL 92
            T H+E+ ++    +          ++YVT  PC  C   +  
Sbjct: 68  RTIHSEMNSLISCAKNGVSTD--NTEIYVTHFPCYNCTKHLLQ 108


>gi|322701806|gb|EFY93554.1| tRNA-specific adenosine-34 deaminase subunit Tad3, putative
           [Metarhizium acridum CQMa 102]
          Length = 433

 Score = 51.1 bits (122), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 28/168 (16%), Positives = 54/168 (32%), Gaps = 54/168 (32%)

Query: 2   KKGNVFMSCALEEAQNAALRN-EIPVGAVAVLNNK----IISRAGNRNRE-------LKD 49
           +  +++M+ A   A  A        +GAV V   +    ++  AG+  +        L +
Sbjct: 224 EDASLWMALAHRVALQAKEAGIGEAMGAVIVQRGENGTELVGLAGDARKHQECNGAVLNN 283

Query: 50  VTAHAEILAIRMGCRIL------------------------------------------S 67
              H  + AI M  + L                                           
Sbjct: 284 TVTHCVLRAISMVAQKLVRHEHREAGITAEAANLYYDCFQDKPLIELERRCFEQEHPNKD 343

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
             +   ++LYVT EPC  C+  I  +R+ +  +     + GG+ +  +
Sbjct: 344 GYLCHGLELYVTHEPCVACSMGILHSRMGKAVFCHHMGRTGGLSSDDR 391


>gi|296414604|ref|XP_002836988.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295632836|emb|CAZ81179.1| unnamed protein product [Tuber melanosporum]
          Length = 404

 Score = 51.1 bits (122), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 11/68 (16%), Positives = 25/68 (36%), Gaps = 5/68 (7%)

Query: 64  RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI-----ENGTQFYT 118
           R     +   + +Y++ EPC MC  A+  +R+  + +G    + G +           + 
Sbjct: 316 RRDDGYLCHNLQVYLSHEPCVMCGMALLHSRVGSVVFGTRMTRTGALNAEAGGKQMGLFW 375

Query: 119 LATCHHSP 126
               +   
Sbjct: 376 RPELNWKF 383



 Score = 40.3 bits (94), Expect = 0.100,   Method: Composition-based stats.
 Identities = 13/59 (22%), Positives = 23/59 (38%), Gaps = 7/59 (11%)

Query: 15  AQNAALRNEIPVGAVAVLN--NKIISRAGNRNRELK-----DVTAHAEILAIRMGCRIL 66
           A+ A     +  GAV V     ++++ AG+           +   HA + AI M  +  
Sbjct: 198 AKAAFSGEGLGFGAVIVDPQTGQVLAAAGDARLRCNEKGWSNPLDHAAMRAIDMVAQRR 256


>gi|322710649|gb|EFZ02223.1| tRNA-specific adenosine-34 deaminase subunit Tad3, putative
           [Metarhizium anisopliae ARSEF 23]
          Length = 433

 Score = 51.1 bits (122), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 28/168 (16%), Positives = 55/168 (32%), Gaps = 54/168 (32%)

Query: 2   KKGNVFMSCALEEAQNAALRN-EIPVGAVAVLNNK----IISRAGNRNRE-------LKD 49
           +  +++M+ A + A  A        +GAV V   +    ++  AG+  +        L +
Sbjct: 224 EDASLWMALAHQVALQAKEAGIGEAMGAVIVQRGENGTELVGLAGDARKHQECNGAILNN 283

Query: 50  VTAHAEILAIRMGCRIL------------------------------------------S 67
              H  + AI M  + L                                           
Sbjct: 284 TVTHCVLRAISMVAQKLVRHEHREAGITAEAANLYYDCFQDQPLIELERRCFEQEHPNKD 343

Query: 68  QEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
             +   ++LYVT EPC  C+  I  +R+ +  +     + GG+ +  +
Sbjct: 344 GYLCHGLELYVTHEPCVACSMGILHSRMGKAVFCHQMGRTGGLSSDDR 391


>gi|116201857|ref|XP_001226740.1| hypothetical protein CHGG_08813 [Chaetomium globosum CBS 148.51]
 gi|88177331|gb|EAQ84799.1| hypothetical protein CHGG_08813 [Chaetomium globosum CBS 148.51]
          Length = 183

 Score = 51.1 bits (122), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 31/133 (23%), Positives = 40/133 (30%), Gaps = 33/133 (24%)

Query: 3   KGNVFMSCALEEAQNAALRNEIP------VGAVAVLN--NKIISRAGNR---NRELKDV- 50
               +M  A E+AQ +      P      VGAV V    N+IIS   +         D  
Sbjct: 13  DHKAYMKYAAEQAQLS-----PPSPSKFCVGAVLVDADRNEIISTGYSEELPRDRPGDPG 67

Query: 51  TAHAEILAIRMGCRILSQEIL-------PEVDLYVTLEPCTM-------CAAAISLAR-- 94
           + HAE                           LY T+EPC         C   I      
Sbjct: 68  STHAEHCCFIKVADRHGVHDFDIAEVLPRNTVLYTTMEPCNQRLSGSRTCVERILALGNA 127

Query: 95  IRRLYYGASNPKG 107
           I+ +Y G   P  
Sbjct: 128 IKVVYVGIREPDT 140


>gi|332655102|ref|ZP_08420843.1| cytidine/deoxycytidylate deaminase family protein [Ruminococcaceae
           bacterium D16]
 gi|332515962|gb|EGJ45571.1| cytidine/deoxycytidylate deaminase family protein [Ruminococcaceae
           bacterium D16]
          Length = 182

 Score = 50.7 bits (121), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 24/110 (21%), Positives = 36/110 (32%), Gaps = 40/110 (36%)

Query: 27  GAVAVLNNKIISRAGN---------------RNRELKDVTA---------HAEILAIRMG 62
           GA+ V N++I+S   N                   +   +          HAE+ AI   
Sbjct: 50  GAIIVKNDEIVSTGYNGAPRGRKNCMDLGYCTREAMNVPSGERYELCRSVHAEMNAIISA 109

Query: 63  CRILSQEILPEVDLYV------TLE------PCTMCAAAISLARIRRLYY 100
            R  +        LY+      T E       C+MC   I  A I+R+  
Sbjct: 110 ARRDT----LGATLYLAGREAKTGELLHDATSCSMCRRLIINAGIQRVVI 155


>gi|300934515|ref|ZP_07149771.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Corynebacterium resistens DSM 45100]
          Length = 320

 Score = 50.7 bits (121), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 21/104 (20%), Positives = 32/104 (30%), Gaps = 15/104 (14%)

Query: 29  VAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM--- 85
           +   + ++  R             HAEI+A+                  VTLEPC     
Sbjct: 2   ILDSDGEVAGRGATEPAGG----RHAEIVALDEAG-----TRARGGRAIVTLEPCNHTGR 52

Query: 86  ---CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
              C  A+  A I R+ Y  ++P            +     H P
Sbjct: 53  TGPCTQALLAAGIVRVDYLFADPFELASGGANSLASAGVEVHGP 96


>gi|126650662|ref|ZP_01722885.1| hypothetical protein BB14905_08728 [Bacillus sp. B14905]
 gi|126592818|gb|EAZ86817.1| hypothetical protein BB14905_08728 [Bacillus sp. B14905]
          Length = 136

 Score = 50.7 bits (121), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 17/68 (25%), Positives = 28/68 (41%), Gaps = 2/68 (2%)

Query: 37  ISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLAR-I 95
           ++   N      D T H E    R   + +S +      +Y + E C MCAA +     +
Sbjct: 2   LAEDRNHV-SGGDHTQHPEFALARWAAKHMSAKERSITTVYTSGEHCPMCAAHMVGLGCL 60

Query: 96  RRLYYGAS 103
            R+ Y +S
Sbjct: 61  GRIVYASS 68


>gi|329924153|ref|ZP_08279370.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Paenibacillus sp. HGF5]
 gi|328940838|gb|EGG37149.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Paenibacillus sp. HGF5]
          Length = 172

 Score = 50.7 bits (121), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 28/145 (19%), Positives = 43/145 (29%), Gaps = 42/145 (28%)

Query: 4   GNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNR----------------- 43
              FM  A   +  +      P   VGAV V   K++  A N                  
Sbjct: 10  DTYFMDIAFMVSTRSQC----PRRHVGAVLVQGKKLLGTAYNGAPMGVPDCSEAGCMIAE 65

Query: 44  --------------NRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAA 89
                          ++    T HAE    +       +       +YVT EPC  CA  
Sbjct: 66  DYELVVQDGKESMVKKQRCIRTIHAE----QNLLLFTDRIDREGSTVYVTDEPCWTCANM 121

Query: 90  ISLARIRRLYYGASNPKGGGIENGT 114
           ++ + I  + +    PK  G  +  
Sbjct: 122 LANSGIVEVVFHRPYPKDSGKVSRM 146


>gi|169806353|ref|XP_001827921.1| cytosine-adenosine deaminase [Enterocytozoon bieneusi H348]
 gi|161778989|gb|EDQ31016.1| cytosine-adenosine deaminase [Enterocytozoon bieneusi H348]
          Length = 240

 Score = 50.7 bits (121), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 21/104 (20%), Positives = 38/104 (36%), Gaps = 10/104 (9%)

Query: 34  NKIISRAGNRNRELKDVTAH---AEILAIRMG----CRILSQEIL-PEVDLYVTLEPCTM 85
           +  I+ A N          H    ++  IR       +      L   +D  + +EPC  
Sbjct: 134 DNAIACAHNCIIIDTMGQIHRFLNKVHIIREAISIISKNNQNGYLCTGMDCILDIEPCYS 193

Query: 86  CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIY 129
           CA A+   RI+ +     + +  GI +  +F      +H   +Y
Sbjct: 194 CAMALVHGRIKNVII--KHKRFNGIFSKEKFNYNKNINHRFLVY 235


>gi|3599384|gb|AAC62690.1| dCMP deaminase [Cenarchaeum symbiosum]
          Length = 213

 Score = 50.7 bits (121), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 27/123 (21%), Positives = 37/123 (30%), Gaps = 28/123 (22%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGN--------------------- 42
              FM  A E A+  +      VGAV V +++ ++   N                     
Sbjct: 47  DEYFMLQA-ELAKLRSNCMVRKVGAVIVRDHRQLATGYNGTPPGVKNCFEGGCERCIERM 105

Query: 43  ----RNRELKDVT--AHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIR 96
               R+ E  D     HAE  AI     +          +Y T  PC  C        IR
Sbjct: 106 EGKIRSGEGLDRCLCNHAEANAIMHCAILGIGAGGGNATMYTTFSPCLECTKMAVTIGIR 165

Query: 97  RLY 99
           R  
Sbjct: 166 RFV 168


>gi|297581626|ref|ZP_06943548.1| cytidine/deoxycytidylate deaminase [Vibrio cholerae RC385]
 gi|297534033|gb|EFH72872.1| cytidine/deoxycytidylate deaminase [Vibrio cholerae RC385]
          Length = 511

 Score = 50.7 bits (121), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 1/48 (2%)

Query: 53  HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
           HAE+ AI +     ++E      L+ T  PC  CA  I  A IRR+ Y
Sbjct: 373 HAEMDAI-VALARNNKESAVGKILFATTYPCHNCARHIVAAGIRRVVY 419


>gi|172035303|ref|YP_001801804.1| putative cytidine/deoxycytidylate deaminase [Cyanothece sp. ATCC
           51142]
 gi|171696757|gb|ACB49738.1| putative cytidine/deoxycytidylate deaminase [Cyanothece sp. ATCC
           51142]
          Length = 180

 Score = 50.7 bits (121), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 30/124 (24%), Positives = 44/124 (35%), Gaps = 34/124 (27%)

Query: 4   GNVFMSCALEEAQNAALRNE---IPVGAVAVLNNKIISRAGNRNRELKDVTAHAEIL--- 57
              F    +  A+ AA R+     PVGAV V + ++++   N        TAH       
Sbjct: 12  DEYF----IMIAKLAATRSTCLAFPVGAVIVKDRQLLATGYN---GSPSGTAHCTAQGFC 64

Query: 58  ----------------AIRMGCRILSQEIL-----PEVDLYVTLEPCTMCAAAISLARIR 96
                           AI      ++Q            +YVTLEPC  C   I  A I+
Sbjct: 65  YPGLDSCDSSSSLPSRAIHAEANAIAQAAKYGISTHGASIYVTLEPCVSCLKLIISAGIK 124

Query: 97  RLYY 100
            ++Y
Sbjct: 125 DVFY 128


>gi|261405573|ref|YP_003241814.1| CMP/dCMP deaminase zinc-binding protein [Paenibacillus sp.
           Y412MC10]
 gi|261282036|gb|ACX64007.1| CMP/dCMP deaminase zinc-binding protein [Paenibacillus sp.
           Y412MC10]
          Length = 173

 Score = 50.7 bits (121), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 28/145 (19%), Positives = 43/145 (29%), Gaps = 42/145 (28%)

Query: 4   GNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNR----------------- 43
              FM  A   +  +      P   VGAV V   K++  A N                  
Sbjct: 11  DTYFMDIAFMVSTRSQC----PRRHVGAVLVQGKKLLGTAYNGAPMGVPDCSEAGCMIAE 66

Query: 44  --------------NRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAA 89
                          ++    T HAE    +       +       +YVT EPC  CA  
Sbjct: 67  DYELVVQDGKESMVKKQRCIRTIHAE----QNLLLFTDRIDREGSTVYVTDEPCWTCANM 122

Query: 90  ISLARIRRLYYGASNPKGGGIENGT 114
           ++ + I  + +    PK  G  +  
Sbjct: 123 LANSGIVEVVFHRPYPKDSGKVSRM 147


>gi|291571887|dbj|BAI94159.1| putative cytidine/deoxycytidylate deaminase [Arthrospira platensis
           NIES-39]
          Length = 195

 Score = 50.7 bits (121), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 25/125 (20%), Positives = 37/125 (29%), Gaps = 36/125 (28%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM-- 61
              F+  A   A  +      PVGAV V + +I++   N        + H          
Sbjct: 29  DEYFLMFAKLAATRSTCLA-FPVGAVIVKDRQILATGYN---GSPSGSVH----CTTQGF 80

Query: 62  ---------GCRILSQEIL-----------------PEVDLYVTLEPCTMCAAAISLARI 95
                      + L    +                     +YVTLEPC  C   I    I
Sbjct: 81  CYPGLSSCDASKTLPSRAVHAEANAIAQAAKHGICCAGASIYVTLEPCIYCLKLIISTGI 140

Query: 96  RRLYY 100
           + +YY
Sbjct: 141 KEVYY 145


>gi|255972218|ref|ZP_05422804.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis T1]
 gi|255963236|gb|EET95712.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis T1]
          Length = 51

 Score = 50.7 bits (121), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 8/36 (22%), Positives = 15/36 (41%)

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
                    +H   +  G+ E+  R ++  FFK+ R
Sbjct: 1   MNLLEDERFNHVAYVEAGVLEEECRLLLVQFFKKLR 36


>gi|255547562|ref|XP_002514838.1| riboflavin-specific deaminase, putative [Ricinus communis]
 gi|223545889|gb|EEF47392.1| riboflavin-specific deaminase, putative [Ricinus communis]
          Length = 600

 Score = 50.7 bits (121), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 24/136 (17%), Positives = 36/136 (26%), Gaps = 19/136 (13%)

Query: 3   KGNVFMSCALEEAQN-AALRNEIP-VGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAI 59
               F+  A E A   A   +  P  G V       +              T  AE+ A+
Sbjct: 36  SDAAFIKRAAELADKSAGCTSPHPNFGCVIATATGNVAGEGY----LYAQGTKPAEVQAV 91

Query: 60  RMGCRILSQEILPEVDLYVTLEP--CT---MCAAAISLARIRRLYYGASNPKGGGIENGT 114
                            Y+ LEP  C       +++  A I R+  G  +P      N  
Sbjct: 92  EAAGEWS-----KGATAYLNLEPGDCHGDHTAVSSLVQAGITRVVVGIRHPLRHLQGNAV 146

Query: 115 QFYTLATCHHSPEIYP 130
                       E+  
Sbjct: 147 HALRNHGL--QVEVLG 160


>gi|291543731|emb|CBL16840.1| Deoxycytidylate deaminase [Ruminococcus sp. 18P13]
          Length = 162

 Score = 50.7 bits (121), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 25/110 (22%), Positives = 37/110 (33%), Gaps = 40/110 (36%)

Query: 26  VGAVAVLNNKIIS-------RAGNRNRELKDVTA-----------------HAEILAIRM 61
            GA+ V +++IIS       R      +L   T                  HAE  AI  
Sbjct: 28  FGAIIVKHDEIISTGYVGAPRGRKNCNDLNYCTRDKLGVPKGQRYELCRSVHAEQNAILS 87

Query: 62  GCRILSQEILPEVDLYVTL------------EPCTMCAAAISLARIRRLY 99
             R      + +  LY+              EPC+MC   I  A I+++ 
Sbjct: 88  AARA----DMIDATLYLACHDARTDQLDGEVEPCSMCKRLIINAGIKQVI 133


>gi|119625104|gb|EAX04699.1| dCMP deaminase, isoform CRA_b [Homo sapiens]
          Length = 119

 Score = 50.7 bits (121), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 15/51 (29%), Positives = 22/51 (43%), Gaps = 4/51 (7%)

Query: 50  VTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
              HAE+ AI       +   +    +YV L PC  CA  I  A I+ + +
Sbjct: 22  PVCHAELNAIMN----KNSTDVKGCSMYVALFPCNECAKLIIQAGIKEVIF 68


>gi|294934867|ref|XP_002781251.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
 gi|239891645|gb|EER13046.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
          Length = 73

 Score = 50.7 bits (121), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 4/51 (7%)

Query: 53  HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
           HAE+ AI       +Q  + +  +Y TL PC  C   I  A I  +YY + 
Sbjct: 6   HAEMNAIMN----KNQHDIRDCAIYTTLFPCHECTKLILQAGITCVYYASD 52


>gi|164658698|ref|XP_001730474.1| hypothetical protein MGL_2270 [Malassezia globosa CBS 7966]
 gi|159104370|gb|EDP43260.1| hypothetical protein MGL_2270 [Malassezia globosa CBS 7966]
          Length = 275

 Score = 50.7 bits (121), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 22/98 (22%), Positives = 30/98 (30%), Gaps = 25/98 (25%)

Query: 26  VGAVAVLNNKIISRAGNRN-RELKDV----------------------TAHAEILAIRMG 62
           VGAV V  ++++S   N   R L +                         HAE  A+   
Sbjct: 152 VGAVLVRQHRVLSTGYNGTPRGLLNCNEGGCARCNESAPCGSSLDECLCLHAEENALLEL 211

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
            R           LY    PC  CA  I    +  + Y
Sbjct: 212 GRDRGGA--QGTVLYCNTCPCLRCAVKIVQTGVMEVVY 247


>gi|85712605|ref|ZP_01043652.1| probable Cytidine deaminase [Idiomarina baltica OS145]
 gi|85693596|gb|EAQ31547.1| probable Cytidine deaminase [Idiomarina baltica OS145]
          Length = 545

 Score = 50.3 bits (120), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 16/56 (28%), Positives = 26/56 (46%), Gaps = 2/56 (3%)

Query: 51  TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPK 106
           T HAE+ A+       +   +    +YV   PC +CA  I  + ++RL +    PK
Sbjct: 393 TVHAEMAALTDAVSKGAS--VKNSTMYVNTFPCHICARHIISSGVKRLVFIEPYPK 446


>gi|156843811|ref|XP_001644971.1| hypothetical protein Kpol_1025p33 [Vanderwaltozyma polyspora DSM
           70294]
 gi|156115625|gb|EDO17113.1| hypothetical protein Kpol_1025p33 [Vanderwaltozyma polyspora DSM
           70294]
          Length = 327

 Score = 50.3 bits (120), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 17/105 (16%), Positives = 36/105 (34%), Gaps = 18/105 (17%)

Query: 43  RNRELKDVTAHAEILAIRMGCRILSQEILPEVD--------------LYVTLEPCTMCAA 88
                 ++  H+ +  I+   +      L  +               +Y T EPC+MC+ 
Sbjct: 205 ERDSTGNILDHSIMSGIQKIAKSERSNRLKNMTQESDELTYLCLNFDVYTTHEPCSMCSM 264

Query: 89  AISLARIRRLYYGASNPKGGGI----ENGTQFYTLATCHHSPEIY 129
           A+  +RI+R  +     K G +     +          +   E++
Sbjct: 265 ALVHSRIKRCIFINQMNKTGCLKLHSGDSYCMQDNKLLNSKYEVF 309


>gi|269793249|ref|YP_003318153.1| CMP/dCMP deaminase zinc-binding protein [Thermanaerovibrio
           acidaminovorans DSM 6589]
 gi|269100884|gb|ACZ19871.1| CMP/dCMP deaminase zinc-binding protein [Thermanaerovibrio
           acidaminovorans DSM 6589]
          Length = 193

 Score = 50.3 bits (120), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 17/78 (21%), Positives = 34/78 (43%), Gaps = 6/78 (7%)

Query: 26  VGAVAVLNNK---IISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEP 82
            GA  +  +    +++   N+  E      H E+  I++   +       +     T EP
Sbjct: 35  FGAAVLRRDDLSLVVA-GTNQ--EAFSPLWHGEVYTIKLFYDLQGHPDPKDCIFLSTHEP 91

Query: 83  CTMCAAAISLARIRRLYY 100
           C+MC +A+S +  + +YY
Sbjct: 92  CSMCISALSWSGFKDIYY 109


>gi|213026041|ref|ZP_03340488.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
          deaminase/5-amino-6-(5-phosphoribosylamino)uracil
          reductase [Salmonella enterica subsp. enterica serovar
          Typhi str. 404ty]
          Length = 59

 Score = 50.3 bits (120), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 6/59 (10%)

Query: 8  MSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCR 64
          M+ AL+ AQ      +  P VG V V N  I+    +          HAE+ A+RMG R
Sbjct: 1  MARALKLAQRGRFTTHPNPNVGCVIVNNGDIVGEGYHHRAGE----PHAEVHALRMGGR 55


>gi|300926387|ref|ZP_07142184.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Escherichia coli MS 182-1]
 gi|300417582|gb|EFK00893.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Escherichia coli MS 182-1]
          Length = 485

 Score = 50.3 bits (120), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 14/48 (29%), Positives = 21/48 (43%), Gaps = 1/48 (2%)

Query: 53  HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
           HAE+  I    R        +  L+ T  PC  CA  I  + I+++ Y
Sbjct: 341 HAEMDVITSMARK-QNGDTKDKILFTTTYPCHNCARHIVASGIKKVVY 387


>gi|222148580|ref|YP_002549537.1| hypothetical protein Avi_2145 [Agrobacterium vitis S4]
 gi|221735566|gb|ACM36529.1| conserved hypothetical protein [Agrobacterium vitis S4]
          Length = 195

 Score = 50.3 bits (120), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 20/88 (22%), Positives = 35/88 (39%), Gaps = 6/88 (6%)

Query: 16  QNAALRNEIPVGAVAVLNNK---IISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILP 72
           +          GA  +  +    +++     N EL +   H E+  ++    +  +    
Sbjct: 23  EKGVAEGNKIFGAAILRKSDLSLVLAE---TNNELDNPLWHGEVHTLKRFYELGERPPTS 79

Query: 73  EVDLYVTLEPCTMCAAAISLARIRRLYY 100
           E+    T EPCTMC +AI+ A     YY
Sbjct: 80  ELIFLSTHEPCTMCMSAITWAGFDNFYY 107


>gi|300825968|gb|ADK36018.1| cytidine/deoxycytidylate deaminase [Oryza sativa]
 gi|300825970|gb|ADK36019.1| cytidine/deoxycytidylate deaminase [Oryza sativa]
 gi|300825972|gb|ADK36020.1| cytidine/deoxycytidylate deaminase [Oryza sativa]
 gi|300825974|gb|ADK36021.1| cytidine/deoxycytidylate deaminase [Oryza sativa]
 gi|300825976|gb|ADK36022.1| cytidine/deoxycytidylate deaminase [Oryza sativa]
 gi|300825978|gb|ADK36023.1| cytidine/deoxycytidylate deaminase [Oryza sativa]
 gi|300825980|gb|ADK36024.1| cytidine/deoxycytidylate deaminase [Oryza sativa]
 gi|300825982|gb|ADK36025.1| cytidine/deoxycytidylate deaminase [Oryza sativa]
 gi|300825984|gb|ADK36026.1| cytidine/deoxycytidylate deaminase [Oryza sativa]
 gi|300825986|gb|ADK36027.1| cytidine/deoxycytidylate deaminase [Oryza sativa]
 gi|300825988|gb|ADK36028.1| cytidine/deoxycytidylate deaminase [Oryza sativa]
 gi|300825990|gb|ADK36029.1| cytidine/deoxycytidylate deaminase [Oryza sativa]
 gi|300825992|gb|ADK36030.1| cytidine/deoxycytidylate deaminase [Oryza sativa]
 gi|300825994|gb|ADK36031.1| cytidine/deoxycytidylate deaminase [Oryza sativa]
 gi|300825996|gb|ADK36032.1| cytidine/deoxycytidylate deaminase [Oryza sativa]
 gi|300825998|gb|ADK36033.1| cytidine/deoxycytidylate deaminase [Oryza sativa]
 gi|300826000|gb|ADK36034.1| cytidine/deoxycytidylate deaminase [Oryza sativa]
 gi|300826002|gb|ADK36035.1| cytidine/deoxycytidylate deaminase [Oryza sativa]
 gi|300826004|gb|ADK36036.1| cytidine/deoxycytidylate deaminase [Oryza sativa]
 gi|300826006|gb|ADK36037.1| cytidine/deoxycytidylate deaminase [Oryza sativa]
 gi|300826008|gb|ADK36038.1| cytidine/deoxycytidylate deaminase [Oryza sativa]
 gi|300826010|gb|ADK36039.1| cytidine/deoxycytidylate deaminase [Oryza sativa]
 gi|300826012|gb|ADK36040.1| cytidine/deoxycytidylate deaminase [Oryza sativa]
 gi|300826014|gb|ADK36041.1| cytidine/deoxycytidylate deaminase [Oryza sativa]
 gi|300826016|gb|ADK36042.1| cytidine/deoxycytidylate deaminase [Oryza sativa]
 gi|300826018|gb|ADK36043.1| cytidine/deoxycytidylate deaminase [Oryza sativa]
 gi|300826020|gb|ADK36044.1| cytidine/deoxycytidylate deaminase [Oryza sativa]
 gi|300826022|gb|ADK36045.1| cytidine/deoxycytidylate deaminase [Oryza sativa]
 gi|300826024|gb|ADK36046.1| cytidine/deoxycytidylate deaminase [Oryza sativa]
 gi|300826026|gb|ADK36047.1| cytidine/deoxycytidylate deaminase [Oryza sativa]
 gi|300826028|gb|ADK36048.1| cytidine/deoxycytidylate deaminase [Oryza sativa]
 gi|300826030|gb|ADK36049.1| cytidine/deoxycytidylate deaminase [Oryza sativa]
 gi|300826032|gb|ADK36050.1| cytidine/deoxycytidylate deaminase [Oryza sativa]
 gi|300826034|gb|ADK36051.1| cytidine/deoxycytidylate deaminase [Oryza sativa]
 gi|300826036|gb|ADK36052.1| cytidine/deoxycytidylate deaminase [Oryza sativa]
 gi|300826038|gb|ADK36053.1| cytidine/deoxycytidylate deaminase [Oryza sativa]
 gi|300826040|gb|ADK36054.1| cytidine/deoxycytidylate deaminase [Oryza sativa]
 gi|300826042|gb|ADK36055.1| cytidine/deoxycytidylate deaminase [Oryza sativa]
 gi|300826044|gb|ADK36056.1| cytidine/deoxycytidylate deaminase [Oryza sativa]
 gi|300826046|gb|ADK36057.1| cytidine/deoxycytidylate deaminase [Oryza sativa]
 gi|300826048|gb|ADK36058.1| cytidine/deoxycytidylate deaminase [Oryza sativa]
 gi|300826050|gb|ADK36059.1| cytidine/deoxycytidylate deaminase [Oryza sativa]
 gi|300826052|gb|ADK36060.1| cytidine/deoxycytidylate deaminase [Oryza sativa]
 gi|300826054|gb|ADK36061.1| cytidine/deoxycytidylate deaminase [Oryza sativa]
 gi|300826056|gb|ADK36062.1| cytidine/deoxycytidylate deaminase [Oryza sativa]
 gi|300826058|gb|ADK36063.1| cytidine/deoxycytidylate deaminase [Oryza sativa]
 gi|300826060|gb|ADK36064.1| cytidine/deoxycytidylate deaminase [Oryza sativa]
 gi|300826062|gb|ADK36065.1| cytidine/deoxycytidylate deaminase [Oryza sativa]
 gi|300826064|gb|ADK36066.1| cytidine/deoxycytidylate deaminase [Oryza sativa]
 gi|300826066|gb|ADK36067.1| cytidine/deoxycytidylate deaminase [Oryza sativa]
 gi|300826068|gb|ADK36068.1| cytidine/deoxycytidylate deaminase [Oryza sativa]
 gi|300826070|gb|ADK36069.1| cytidine/deoxycytidylate deaminase [Oryza sativa]
 gi|300826072|gb|ADK36070.1| cytidine/deoxycytidylate deaminase [Oryza sativa]
 gi|300826074|gb|ADK36071.1| cytidine/deoxycytidylate deaminase [Oryza sativa]
 gi|300826076|gb|ADK36072.1| cytidine/deoxycytidylate deaminase [Oryza sativa]
 gi|300826078|gb|ADK36073.1| cytidine/deoxycytidylate deaminase [Oryza sativa]
 gi|300826080|gb|ADK36074.1| cytidine/deoxycytidylate deaminase [Oryza sativa]
 gi|300826082|gb|ADK36075.1| cytidine/deoxycytidylate deaminase [Oryza sativa Japonica Group]
 gi|300826084|gb|ADK36076.1| cytidine/deoxycytidylate deaminase [Oryza sativa Japonica Group]
 gi|300826086|gb|ADK36077.1| cytidine/deoxycytidylate deaminase [Oryza sativa Japonica Group]
 gi|300826088|gb|ADK36078.1| cytidine/deoxycytidylate deaminase [Oryza sativa Japonica Group]
 gi|300826090|gb|ADK36079.1| cytidine/deoxycytidylate deaminase [Oryza sativa Japonica Group]
 gi|300826092|gb|ADK36080.1| cytidine/deoxycytidylate deaminase [Oryza sativa Japonica Group]
 gi|300826094|gb|ADK36081.1| cytidine/deoxycytidylate deaminase [Oryza sativa Japonica Group]
 gi|300826096|gb|ADK36082.1| cytidine/deoxycytidylate deaminase [Oryza sativa Japonica Group]
 gi|300826098|gb|ADK36083.1| cytidine/deoxycytidylate deaminase [Oryza sativa Japonica Group]
 gi|300826100|gb|ADK36084.1| cytidine/deoxycytidylate deaminase [Oryza sativa Japonica Group]
 gi|300826102|gb|ADK36085.1| cytidine/deoxycytidylate deaminase [Oryza sativa Japonica Group]
 gi|300826104|gb|ADK36086.1| cytidine/deoxycytidylate deaminase [Oryza sativa Japonica Group]
 gi|300826106|gb|ADK36087.1| cytidine/deoxycytidylate deaminase [Oryza sativa Japonica Group]
 gi|300826108|gb|ADK36088.1| cytidine/deoxycytidylate deaminase [Oryza sativa Indica Group]
 gi|300826110|gb|ADK36089.1| cytidine/deoxycytidylate deaminase [Oryza sativa Indica Group]
 gi|300826112|gb|ADK36090.1| cytidine/deoxycytidylate deaminase [Oryza rufipogon]
 gi|300826114|gb|ADK36091.1| cytidine/deoxycytidylate deaminase [Oryza rufipogon]
 gi|300826116|gb|ADK36092.1| cytidine/deoxycytidylate deaminase [Oryza rufipogon]
 gi|300826118|gb|ADK36093.1| cytidine/deoxycytidylate deaminase [Oryza rufipogon]
 gi|300826120|gb|ADK36094.1| cytidine/deoxycytidylate deaminase [Oryza rufipogon]
 gi|300826122|gb|ADK36095.1| cytidine/deoxycytidylate deaminase [Oryza rufipogon]
 gi|300826124|gb|ADK36096.1| cytidine/deoxycytidylate deaminase [Oryza rufipogon]
 gi|300826126|gb|ADK36097.1| cytidine/deoxycytidylate deaminase [Oryza rufipogon]
 gi|300826128|gb|ADK36098.1| cytidine/deoxycytidylate deaminase [Oryza rufipogon]
 gi|300826130|gb|ADK36099.1| cytidine/deoxycytidylate deaminase [Oryza rufipogon]
 gi|300826132|gb|ADK36100.1| cytidine/deoxycytidylate deaminase [Oryza rufipogon]
 gi|300826134|gb|ADK36101.1| cytidine/deoxycytidylate deaminase [Oryza rufipogon]
 gi|300826136|gb|ADK36102.1| cytidine/deoxycytidylate deaminase [Oryza rufipogon]
 gi|300826138|gb|ADK36103.1| cytidine/deoxycytidylate deaminase [Oryza rufipogon]
 gi|300826140|gb|ADK36104.1| cytidine/deoxycytidylate deaminase [Oryza rufipogon]
 gi|300826142|gb|ADK36105.1| cytidine/deoxycytidylate deaminase [Oryza rufipogon]
 gi|300826144|gb|ADK36106.1| cytidine/deoxycytidylate deaminase [Oryza rufipogon]
 gi|300826146|gb|ADK36107.1| cytidine/deoxycytidylate deaminase [Oryza rufipogon]
 gi|300826148|gb|ADK36108.1| cytidine/deoxycytidylate deaminase [Oryza rufipogon]
 gi|300826150|gb|ADK36109.1| cytidine/deoxycytidylate deaminase [Oryza rufipogon]
 gi|300826152|gb|ADK36110.1| cytidine/deoxycytidylate deaminase [Oryza rufipogon]
 gi|300826154|gb|ADK36111.1| cytidine/deoxycytidylate deaminase [Oryza rufipogon]
 gi|300826156|gb|ADK36112.1| cytidine/deoxycytidylate deaminase [Oryza rufipogon]
 gi|300826158|gb|ADK36113.1| cytidine/deoxycytidylate deaminase [Oryza rufipogon]
 gi|300826160|gb|ADK36114.1| cytidine/deoxycytidylate deaminase [Oryza nivara]
 gi|300826162|gb|ADK36115.1| cytidine/deoxycytidylate deaminase [Oryza nivara]
 gi|300826164|gb|ADK36116.1| cytidine/deoxycytidylate deaminase [Oryza glumipatula]
 gi|300826166|gb|ADK36117.1| cytidine/deoxycytidylate deaminase [Oryza glumipatula]
 gi|300826168|gb|ADK36118.1| cytidine/deoxycytidylate deaminase [Oryza meridionalis]
 gi|300826170|gb|ADK36119.1| cytidine/deoxycytidylate deaminase [Oryza sativa Japonica Group]
 gi|300826172|gb|ADK36120.1| cytidine/deoxycytidylate deaminase [Oryza sativa Japonica Group]
 gi|300826174|gb|ADK36121.1| cytidine/deoxycytidylate deaminase [Oryza sativa Indica Group]
 gi|300826176|gb|ADK36122.1| cytidine/deoxycytidylate deaminase [Oryza sativa Indica Group]
 gi|300826178|gb|ADK36123.1| cytidine/deoxycytidylate deaminase [Oryza sativa Indica Group]
 gi|300826180|gb|ADK36124.1| cytidine/deoxycytidylate deaminase [Oryza sativa Indica Group]
 gi|300826182|gb|ADK36125.1| cytidine/deoxycytidylate deaminase [Oryza sativa Indica Group]
 gi|300826184|gb|ADK36126.1| cytidine/deoxycytidylate deaminase [Oryza sativa Indica Group]
 gi|300826186|gb|ADK36127.1| cytidine/deoxycytidylate deaminase [Oryza sativa Indica Group]
 gi|300826188|gb|ADK36128.1| cytidine/deoxycytidylate deaminase [Oryza sativa Indica Group]
 gi|300826190|gb|ADK36129.1| cytidine/deoxycytidylate deaminase [Oryza sativa Indica Group]
 gi|300826192|gb|ADK36130.1| cytidine/deoxycytidylate deaminase [Oryza sativa Indica Group]
 gi|300826194|gb|ADK36131.1| cytidine/deoxycytidylate deaminase [Oryza sativa Indica Group]
 gi|300826196|gb|ADK36132.1| cytidine/deoxycytidylate deaminase [Oryza sativa Indica Group]
 gi|300826198|gb|ADK36133.1| cytidine/deoxycytidylate deaminase [Oryza sativa Japonica Group]
 gi|300826200|gb|ADK36134.1| cytidine/deoxycytidylate deaminase [Oryza sativa Japonica Group]
 gi|300826202|gb|ADK36135.1| cytidine/deoxycytidylate deaminase [Oryza sativa Japonica Group]
 gi|300826204|gb|ADK36136.1| cytidine/deoxycytidylate deaminase [Oryza sativa Japonica Group]
 gi|300826206|gb|ADK36137.1| cytidine/deoxycytidylate deaminase [Oryza sativa Japonica Group]
 gi|300826208|gb|ADK36138.1| cytidine/deoxycytidylate deaminase [Oryza sativa Japonica Group]
 gi|300826210|gb|ADK36139.1| cytidine/deoxycytidylate deaminase [Oryza sativa Japonica Group]
 gi|300826212|gb|ADK36140.1| cytidine/deoxycytidylate deaminase [Oryza sativa Japonica Group]
 gi|300826214|gb|ADK36141.1| cytidine/deoxycytidylate deaminase [Oryza sativa Japonica Group]
 gi|300826216|gb|ADK36142.1| cytidine/deoxycytidylate deaminase [Oryza sativa Japonica Group]
 gi|300826220|gb|ADK36143.1| cytidine/deoxycytidylate deaminase [Oryza sativa Japonica Group]
 gi|300826222|gb|ADK36144.1| cytidine/deoxycytidylate deaminase [Oryza sativa Indica Group]
 gi|300826224|gb|ADK36145.1| cytidine/deoxycytidylate deaminase [Oryza rufipogon]
 gi|300826226|gb|ADK36146.1| cytidine/deoxycytidylate deaminase [Oryza meridionalis]
          Length = 72

 Score = 50.3 bits (120), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 21/61 (34%), Positives = 33/61 (54%), Gaps = 1/61 (1%)

Query: 2  KKGNVFMSCALEEAQNAALRNEI-PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIR 60
           + + F++ A+EEA       +  P GAV V N++++    N   +  D TAHAE+ AIR
Sbjct: 12 DRDHKFLTKAVEEAYRGVDCGDGGPFGAVVVRNDEVVVSCHNMVLKHTDPTAHAEVTAIR 71

Query: 61 M 61
           
Sbjct: 72 E 72


>gi|296532454|ref|ZP_06895178.1| deoxycytidylate deaminase [Roseomonas cervicalis ATCC 49957]
 gi|296267229|gb|EFH13130.1| deoxycytidylate deaminase [Roseomonas cervicalis ATCC 49957]
          Length = 201

 Score = 50.3 bits (120), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 24/97 (24%), Positives = 34/97 (35%), Gaps = 22/97 (22%)

Query: 26  VGAVAV--LNNKIISRAGN--------RNRELKD-VTA-----HAEILAIRMGCRILSQE 69
           VGAV V     +I++   N            L+D  T      HAE  A+          
Sbjct: 39  VGAVLVNQPQARIVATGFNGFPSNVEDSAERLQDKATKLRMMVHAEQNALLHAGH----- 93

Query: 70  ILPEVDLYVTLEP-CTMCAAAISLARIRRLYYGASNP 105
                D YV  +P C  CA  +  A ++R+   A   
Sbjct: 94  NARGCDAYVVGKPVCNTCATLLIQAGVKRVVAAAPRE 130


>gi|332644755|gb|AEE78276.1| cytidine/deoxycytidylate deaminase-like protein [Arabidopsis
           thaliana]
          Length = 596

 Score = 50.3 bits (120), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 26/149 (17%), Positives = 44/149 (29%), Gaps = 28/149 (18%)

Query: 2   KKGNVFMSCALEEAQN-AALRNEIP-VGAVAV-LNNKIISRAGNRNRELKDVTAHAEILA 58
                F+  A + ++  A L +  P  G V    + K+              T  AE LA
Sbjct: 30  TTDAAFIRRAADLSEMSAGLTSPHPNFGCVIATSSGKVAGEGY----LYAQGTKPAEALA 85

Query: 59  IRMGCRILSQEILPEVDLYVTLEP--CT---MCAAAISLARIRRLYYGASNPKGGGIENG 113
           +                 Y+ +EP  C       +A+  A I R+  G  +P      + 
Sbjct: 86  VEAAGEFS-----RGATAYLNMEPGDCHGDHTAVSALVQAGIERVVVGIRHPLQHLRGSA 140

Query: 114 TQFYTLATCHHSPEI-------YPGISEQ 135
            +        H  E+          + E 
Sbjct: 141 IRELRS----HGIEVNVLGEDFESKVLED 165


>gi|299139757|ref|ZP_07032930.1| CMP/dCMP deaminase zinc-binding [Acidobacterium sp. MP5ACTX8]
 gi|298598381|gb|EFI54546.1| CMP/dCMP deaminase zinc-binding [Acidobacterium sp. MP5ACTX8]
          Length = 512

 Score = 50.3 bits (120), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 19/57 (33%), Positives = 23/57 (40%), Gaps = 2/57 (3%)

Query: 53  HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109
           HAE+ AI    R     +     LY T  PC  CA  I  A I ++ Y    PK   
Sbjct: 347 HAEMEAILSCARKGISTV--GRTLYTTTFPCHNCARHIIGAGISKVVYIEPYPKSKA 401


>gi|15232791|ref|NP_190323.1| cytidine/deoxycytidylate deaminase family protein [Arabidopsis
           thaliana]
 gi|5541706|emb|CAB51211.1| putative protein [Arabidopsis thaliana]
 gi|332644754|gb|AEE78275.1| cytidine/deoxycytidylate deaminase-like protein [Arabidopsis
           thaliana]
          Length = 599

 Score = 50.3 bits (120), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 26/149 (17%), Positives = 44/149 (29%), Gaps = 28/149 (18%)

Query: 2   KKGNVFMSCALEEAQN-AALRNEIP-VGAVAV-LNNKIISRAGNRNRELKDVTAHAEILA 58
                F+  A + ++  A L +  P  G V    + K+              T  AE LA
Sbjct: 30  TTDAAFIRRAADLSEMSAGLTSPHPNFGCVIATSSGKVAGEGY----LYAQGTKPAEALA 85

Query: 59  IRMGCRILSQEILPEVDLYVTLEP--CT---MCAAAISLARIRRLYYGASNPKGGGIENG 113
           +                 Y+ +EP  C       +A+  A I R+  G  +P      + 
Sbjct: 86  VEAAGEFS-----RGATAYLNMEPGDCHGDHTAVSALVQAGIERVVVGIRHPLQHLRGSA 140

Query: 114 TQFYTLATCHHSPEI-------YPGISEQ 135
            +        H  E+          + E 
Sbjct: 141 IRELRS----HGIEVNVLGEDFESKVLED 165


>gi|58260972|ref|XP_567896.1| hypothetical protein [Cryptococcus neoformans var. neoformans
           JEC21]
 gi|134116893|ref|XP_772673.1| hypothetical protein CNBK0470 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|50255291|gb|EAL18026.1| hypothetical protein CNBK0470 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|57229977|gb|AAW46379.1| conserved hypothetical protein [Cryptococcus neoformans var.
           neoformans JEC21]
          Length = 210

 Score = 49.9 bits (119), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 17/79 (21%), Positives = 31/79 (39%), Gaps = 6/79 (7%)

Query: 26  VGAVAVLNNK--IISRAGNRNRELKDVTAHAEILAIRM--GCRILSQEILPEVDLYVTLE 81
            GA  +  +   ++  A N   E      H EI  I+         + +  E   + T E
Sbjct: 35  FGAAILRKSDLSVVVVATN--NETSSPLLHGEINCIQHFYALPADQRPLPSECVFFATHE 92

Query: 82  PCTMCAAAISLARIRRLYY 100
           PC++C + I+ +     Y+
Sbjct: 93  PCSLCLSGITWSGFDNHYF 111


>gi|294877862|ref|XP_002768164.1| deoxycytidylate deaminase, putative [Perkinsus marinus ATCC 50983]
 gi|239870361|gb|EER00882.1| deoxycytidylate deaminase, putative [Perkinsus marinus ATCC 50983]
          Length = 365

 Score = 49.9 bits (119), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 27/113 (23%), Positives = 41/113 (36%), Gaps = 31/113 (27%)

Query: 1   MKKGNVFMSCALEEAQNAALR---NEIPVGAVAVLN-NKIISRAGN---RNRELKDVTA- 52
           ++  + FMS A   A  +  R     +    V V + N+I++   N   R    KD+   
Sbjct: 219 LQWDDYFMSVAFLTAMRSKDRESRGGV----VIVNDQNRIVAVGYNGMPRGIADKDLPWA 274

Query: 53  ---------------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAI 90
                          HA I AI       +Q  + +  +Y T  PC  CA  I
Sbjct: 275 SHHEDKAQEKHMYMCHATINAIMN----KNQHSVRDCRIYATAFPCCECAKFI 323


>gi|330940147|ref|XP_003305924.1| hypothetical protein PTT_18900 [Pyrenophora teres f. teres 0-1]
 gi|311316849|gb|EFQ85984.1| hypothetical protein PTT_18900 [Pyrenophora teres f. teres 0-1]
          Length = 436

 Score = 49.9 bits (119), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 17/37 (45%), Positives = 24/37 (64%)

Query: 73  EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109
           ++D+Y+T EPC MC+ AI  +R RR  +G   P  GG
Sbjct: 345 DLDIYLTNEPCVMCSMAILHSRFRRCIFGKRMPHTGG 381


>gi|189195612|ref|XP_001934144.1| conserved hypothetical protein [Pyrenophora tritici-repentis
           Pt-1C-BFP]
 gi|187980023|gb|EDU46649.1| conserved hypothetical protein [Pyrenophora tritici-repentis
           Pt-1C-BFP]
          Length = 501

 Score = 49.9 bits (119), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 17/37 (45%), Positives = 24/37 (64%)

Query: 73  EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109
           ++D+Y+T EPC MC+ AI  +R RR  +G   P  GG
Sbjct: 410 DLDIYLTNEPCVMCSMAILHSRFRRCIFGKRMPHTGG 446


>gi|86357578|ref|YP_469470.1| deoxycytidylate deaminase family protein [Rhizobium etli CFN 42]
 gi|86281680|gb|ABC90743.1| probable deoxycytidylate deaminase family protein [Rhizobium etli
           CFN 42]
          Length = 195

 Score = 49.9 bits (119), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 19/78 (24%), Positives = 34/78 (43%), Gaps = 6/78 (7%)

Query: 26  VGAVAVLNNK---IISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEP 82
            GA  +  +    +++     N EL +   H E+  ++    +  +    ++    T EP
Sbjct: 33  FGAAILRKSDLSLVVAE---TNNELDNPLWHGEVHTLKRFYELGDKPQTKDLIFLSTHEP 89

Query: 83  CTMCAAAISLARIRRLYY 100
           CTMC +AI+ A     YY
Sbjct: 90  CTMCMSAITWAGFDNFYY 107


>gi|316967943|gb|EFV52296.1| deoxycytidylate deaminase [Trichinella spiralis]
          Length = 155

 Score = 49.9 bits (119), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 25/113 (22%), Positives = 36/113 (31%), Gaps = 31/113 (27%)

Query: 5   NVFMSCALEEAQNAALRNEIPV---GAVAV-LNNKIISRAGN------------------ 42
           + FM  AL  ++ +      P+   GA  V  +N II    N                  
Sbjct: 16  DYFMGVALLSSKRSKD----PIMQEGACIVNSDNHIIGVGYNGMPAGCSDDRMPWADQAN 71

Query: 43  RNRELKDV-TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLAR 94
              E K     HA   A+      +S        LY T  PC+ CA  +  + 
Sbjct: 72  SILETKHPYICHA---ALNAVVNKISNSA-KGCCLYTTHLPCSHCAGLLIQSG 120


>gi|322699440|gb|EFY91201.1| cytidine and deoxycytidylate deaminase [Metarhizium acridum CQMa
           102]
          Length = 168

 Score = 49.9 bits (119), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 28/126 (22%), Positives = 50/126 (39%), Gaps = 28/126 (22%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIP----VGAVAV--LNNKIISRAGNRNRELKDVTAHAE 55
           +   + M  AL  A+ +  +   P    VGA+ V   + ++++       E      HAE
Sbjct: 7   QDHKMLMRRALALAEKSPPK---PSNFRVGALLVNLDDGQVVAEGYTLECEGN---THAE 60

Query: 56  ILA-IRMGCRILSQEI-LPEVD-----LYVTLEPC-------TMCAAAIS--LARIRRLY 99
               I++  +  ++E  L ++      LY T+EPC         C   +    + IR +Y
Sbjct: 61  ECCFIKLAEQHATKEEGLVDIINTPHALYTTMEPCFKRLSGKLPCVERVLRQKSWIREVY 120

Query: 100 YGASNP 105
            G   P
Sbjct: 121 LGVQEP 126


>gi|325292783|ref|YP_004278647.1| deoxycytidylate deaminase family protein [Agrobacterium sp. H13-3]
 gi|325060636|gb|ADY64327.1| deoxycytidylate deaminase family protein [Agrobacterium sp. H13-3]
          Length = 210

 Score = 49.9 bits (119), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 21/77 (27%), Positives = 35/77 (45%), Gaps = 6/77 (7%)

Query: 26  VGAVAVLNNK---IISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEP 82
            GA  +  +    +I+     N EL++   H E+ A++    +  +    E+    T EP
Sbjct: 48  FGAAILRKSDLSLVIAE---TNNELENPLWHGEVHALKRFYELGEKPNTKELIFLSTHEP 104

Query: 83  CTMCAAAISLARIRRLY 99
           CTMC +AI+ A     Y
Sbjct: 105 CTMCMSAITWAGFDNFY 121


>gi|60688555|gb|AAX30382.1| SJCHGC03167 protein [Schistosoma japonicum]
 gi|226479958|emb|CAX73275.1| putative 6030466N05Rik protein [Schistosoma japonicum]
          Length = 98

 Score = 49.9 bits (119), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 4/48 (8%)

Query: 53  HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
           HAE+ A+       S+       LY T+ PC  CA  I  A I+ + Y
Sbjct: 15  HAELNAVLNRNEAHSR----GCTLYSTMFPCNECAKVIIQAGIKEVVY 58


>gi|253574668|ref|ZP_04852008.1| CMP/dCMP deaminase, zinc-binding [Paenibacillus sp. oral taxon 786
           str. D14]
 gi|251845714|gb|EES73722.1| CMP/dCMP deaminase, zinc-binding [Paenibacillus sp. oral taxon 786
           str. D14]
          Length = 172

 Score = 49.9 bits (119), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 27/134 (20%), Positives = 39/134 (29%), Gaps = 36/134 (26%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGN--------------------- 42
              FM  A   +  +       VGAV V   K++  A N                     
Sbjct: 10  DTYFMDIAYMVSTRSRCNRRH-VGAVLVQGKKLLGTAYNGAPSGVPDCSEAGCMIAEEYE 68

Query: 43  RNRELKD----------VTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISL 92
              E              T HAE    +       +       +YVT EPC  CA  ++ 
Sbjct: 69  LVVEDGQEKMVKKQRCVRTIHAE----QNLLLFTDRIDREGSSVYVTDEPCWTCANMLAN 124

Query: 93  ARIRRLYYGASNPK 106
           + I  + +    PK
Sbjct: 125 SGITEIVFHRPYPK 138


>gi|294101090|ref|YP_003552948.1| CMP/dCMP deaminase zinc-binding protein [Aminobacterium colombiense
           DSM 12261]
 gi|293616070|gb|ADE56224.1| CMP/dCMP deaminase zinc-binding protein [Aminobacterium colombiense
           DSM 12261]
          Length = 187

 Score = 49.9 bits (119), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 23/110 (20%), Positives = 41/110 (37%), Gaps = 13/110 (11%)

Query: 1   MKKGNVFMSCA--LE-----EAQNAALRNEIPVGAVAVLNNK---IISRAGNRNRELKDV 50
           M +  VF      +E     E + A        GA  V  +    +++     N E    
Sbjct: 1   MDQEKVFWRMLDVIEDFIVPETRLAVPHGHKIFGAAIVRRSDLSLVVAE---TNHEGWSP 57

Query: 51  TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
             H E+  I+    +       E     T EPC+MC ++I+ +   ++Y+
Sbjct: 58  LWHGEVYTIKKFFELDDHPDPRECIFLSTHEPCSMCLSSIAWSGFPQIYF 107


>gi|212702197|ref|ZP_03310325.1| hypothetical protein DESPIG_00208 [Desulfovibrio piger ATCC 29098]
 gi|212674402|gb|EEB34885.1| hypothetical protein DESPIG_00208 [Desulfovibrio piger ATCC 29098]
          Length = 156

 Score = 49.9 bits (119), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 20/98 (20%), Positives = 35/98 (35%), Gaps = 25/98 (25%)

Query: 26  VGAVAVLNNKIISRAGN--------------RNRELKDVTA---------HAEILAIRMG 62
           VGA+AV +  I++   N                 ++   +          HAE   I   
Sbjct: 25  VGAIAVKDRHILATGYNGAPSGVRHCLETGCLREQMGIPSGQRHEICRGLHAEQNVIIQA 84

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
              +    +   +LY T  PC MC+  +    I+ ++Y
Sbjct: 85  A--VHGVSIAGAELYCTTFPCAMCSKMLINCGIKHIWY 120


>gi|326804530|ref|YP_004327401.1| conserved uncharacterised protein [Salmonella phage Vi01]
 gi|301795180|emb|CBW37898.1| conserved uncharacterised protein [Salmonella phage Vi01]
          Length = 173

 Score = 49.9 bits (119), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 18/93 (19%), Positives = 31/93 (33%), Gaps = 20/93 (21%)

Query: 26  VGAVAVLN--NKIISRAGNRN---------------RELKDVTAHAEILAIRMGCRILSQ 68
           VG V V    ++ ++   N                         HAE  A+       + 
Sbjct: 29  VGCVIVNPETDQPVAIGWNGTPPGMPNVCEMEQHGQIVTNPCVVHAEENALMRIPE--NA 86

Query: 69  EILPEVDLYVTLEPCTMCAAAISLAR-IRRLYY 100
           +    + ++VT  PC  C   I  +  I ++YY
Sbjct: 87  DDFTGLVMFVTHSPCPNCTQKIIDSGKIDKVYY 119


>gi|3599408|gb|AAC62713.1| dCMP deaminase [Cenarchaeum symbiosum]
          Length = 184

 Score = 49.5 bits (118), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 24/123 (19%), Positives = 35/123 (28%), Gaps = 28/123 (22%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNR-------------------- 43
              FM  A E A+  +      VGAV V +++ ++   N                     
Sbjct: 18  DEYFMLQA-ELAKLRSNCIVRKVGAVIVRDHRQLATGYNGTPPGVKNCYEGGCERCAERI 76

Query: 44  --NRELKDVT-----AHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIR 96
               +  +        HAE  AI     +          +Y T  PC  C        IR
Sbjct: 77  EGRIKSGEALDRCLCNHAEANAIMHCAILGIGAGGGGATMYTTFSPCLECTKMAVTIGIR 136

Query: 97  RLY 99
           R  
Sbjct: 137 RFV 139


>gi|325094503|gb|EGC47813.1| conserved hypothetical protein [Ajellomyces capsulatus H88]
          Length = 175

 Score = 49.5 bits (118), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 23/104 (22%), Positives = 32/104 (30%), Gaps = 28/104 (26%)

Query: 6   VFMSCALEEAQNAALRNEIP-----VGAVAVLN------NKIISRAGNRNRELKDVTAHA 54
            +M  A      A      P      G+V V +        +I    N N +  +  +H 
Sbjct: 49  YWMRKA----NQALPDLGSPCPWAAFGSVVVNHTTAEELGDLICSGVNENLKSGNPVSHG 104

Query: 55  EILAIRMGCRILSQEI-------------LPEVDLYVTLEPCTM 85
           EI AI     IL+ +                E  LY   E C M
Sbjct: 105 EIAAITNCTDILTNKDGRFKLTSLEALEAFKEFTLYTNAESCPM 148


>gi|255610979|ref|XP_002539255.1| deoxycytidylate deaminase, putative [Ricinus communis]
 gi|223507699|gb|EEF23128.1| deoxycytidylate deaminase, putative [Ricinus communis]
          Length = 279

 Score = 49.5 bits (118), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 16/48 (33%), Positives = 23/48 (47%), Gaps = 1/48 (2%)

Query: 53  HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
           HAE+ AI    R      +    ++VT  PC  CA  I  A I+ +Y+
Sbjct: 118 HAEMHAILTALRQKGD-RVRGGKIFVTTYPCHSCARHIVAAGIKEVYF 164


>gi|167465254|ref|ZP_02330343.1| CMP/dCMP deaminase, zinc-binding protein [Paenibacillus larvae
           subsp. larvae BRL-230010]
 gi|322384962|ref|ZP_08058618.1| DNA transport-associated-like protein [Paenibacillus larvae subsp.
           larvae B-3650]
 gi|321150259|gb|EFX43766.1| DNA transport-associated-like protein [Paenibacillus larvae subsp.
           larvae B-3650]
          Length = 170

 Score = 49.5 bits (118), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 26/134 (19%), Positives = 40/134 (29%), Gaps = 36/134 (26%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNR-------------------- 43
              FM  A   +  +       VGAV V   K++  A N                     
Sbjct: 8   DTYFMDIAYMASTRSQCSRRH-VGAVLVKGKKLLGTAYNGAPMGVPDCSEAGCMLVEEYE 66

Query: 44  -----------NRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISL 92
                       ++    T HAE    +       +E      +YVT +PC  CA  ++ 
Sbjct: 67  LKVVDGKEEMIRKQRCIRTIHAE----QNLLLFTDREDREGATVYVTDQPCWTCANMLAN 122

Query: 93  ARIRRLYYGASNPK 106
           +    + Y    PK
Sbjct: 123 SGATEIVYHRPYPK 136


>gi|326432789|gb|EGD78359.1| deoxycytidylate deaminase [Salpingoeca sp. ATCC 50818]
          Length = 185

 Score = 49.5 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 28/120 (23%), Positives = 38/120 (31%), Gaps = 25/120 (20%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRN-----------RELKDVTA 52
           + FM+ A   AQ +    E   GA  V   NKI+    N             R   D   
Sbjct: 23  DYFMAVAFLSAQRSKDP-ESQFGACIVNSENKIVGIGYNGMPRGCSDDKLPWRSQGDSVL 81

Query: 53  --------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASN 104
                    AE+ AI       +   +    +YV   P    A  I  A I+ + Y A  
Sbjct: 82  DTKYPFVCQAEMNAILN----RNSSSIRGCRIYVMQFPDNESAKLIIQAGIKEVVYVADE 137


>gi|162135105|ref|YP_001595846.1| hypothetical protein [Pseudomonas phage YuA]
 gi|161513952|emb|CAO77778.1| hypothetical protein [Pseudomonas phage YuA]
          Length = 153

 Score = 49.5 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 20/90 (22%), Positives = 30/90 (33%), Gaps = 20/90 (22%)

Query: 26  VGAVAVLNNKIISR-AGNRNRELKDVTA--------------HAEILAIRMGCRILSQEI 70
           VGAV V  N  ++    N      D +               HAE+ A+      L    
Sbjct: 30  VGAVLVRPNNSVASTGFNGFPPGHDDSPELYADRGYKYQHVVHAEVNAL----NFLGSPA 85

Query: 71  LPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
                LY +   C  C  A   A ++R+ +
Sbjct: 86  -TGFTLYTSFPCCPNCMEAAGEAGVKRVAF 114


>gi|223944391|gb|ACN26279.1| unknown [Zea mays]
          Length = 154

 Score = 49.5 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 27/118 (22%), Positives = 37/118 (31%), Gaps = 33/118 (27%)

Query: 8   MSCALEEAQNAALRNEIP---VGAVAVLNNKII-SRAGN--------------RNRELKD 49
           M+ A   A+ +      P   VGA  V    II     N              +     D
Sbjct: 1   MAIAFLSAERSKD----PNRQVGACLVSQEGIILGIGYNGFPRGCSDDKLPWAKKSASGD 56

Query: 50  VT-------AHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
                     HAE+ AI       +        LYVT+ PC  CA  I  + +  + Y
Sbjct: 57  PLETKFPYVVHAEVNAILNTNHASA----AGQKLYVTMFPCNECAKIIIQSGVSEVIY 110


>gi|114798109|ref|YP_758764.1| riboflavin biosynthesis protein RibD domain-containing protein
           [Hyphomonas neptunium ATCC 15444]
 gi|114738283|gb|ABI76408.1| riboflavin biosynthesis protein RibD N-terminal domain protein
           [Hyphomonas neptunium ATCC 15444]
          Length = 152

 Score = 49.5 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 29/148 (19%), Positives = 49/148 (33%), Gaps = 26/148 (17%)

Query: 11  ALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAG--NRNRELKDVTAHAEILAIRMGCRIL 66
           A + A+    L  + P VG + +      +R               HAE +A+       
Sbjct: 16  AFQLARLNHGLTGKNPSVGCLILD-----ARGHIAGAGVTGTGGAPHAEEVALDEAAGKA 70

Query: 67  SQEILPEVDLYVTLEPC-------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
           +         YVTLEPC         CA  +  A I R+     +P      +G      
Sbjct: 71  AGGT-----AYVTLEPCRERSSGAPSCARKLVEAGIARVVVAIEDPHPTA-RDGLAILRE 124

Query: 120 ATCHHSPEIYPGISEQRSRQIIQDFFKE 147
           A       +  G+ +  + ++ + FF  
Sbjct: 125 AG----VRVETGLGKYTAARLYRAFFAA 148


>gi|218516842|ref|ZP_03513682.1| putative guanine/cytosine deaminase protein [Rhizobium etli 8C-3]
          Length = 195

 Score = 49.5 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 19/78 (24%), Positives = 34/78 (43%), Gaps = 6/78 (7%)

Query: 26  VGAVAVLNNK---IISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEP 82
            GA  +       +++     N EL++   H E+  ++    +  +    ++    T EP
Sbjct: 33  FGAAILRKTDLSLVVAE---TNNELENPLWHGEVHTLKRFYELGDKPATRDLIFLSTHEP 89

Query: 83  CTMCAAAISLARIRRLYY 100
           CTMC +AI+ A     YY
Sbjct: 90  CTMCMSAITWAGFDNFYY 107


>gi|190891665|ref|YP_001978207.1| guanine/cytosine deaminase [Rhizobium etli CIAT 652]
 gi|190696944|gb|ACE91029.1| putative guanine/cytosine deaminase protein [Rhizobium etli CIAT
           652]
          Length = 195

 Score = 49.5 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 19/78 (24%), Positives = 34/78 (43%), Gaps = 6/78 (7%)

Query: 26  VGAVAVLNNK---IISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEP 82
            GA  +       +++     N EL++   H E+  ++    +  +    ++    T EP
Sbjct: 33  FGAAILRKTDLSLVVAE---TNNELENPLWHGEVHTLKRFYELGDKPATRDLIFLSTHEP 89

Query: 83  CTMCAAAISLARIRRLYY 100
           CTMC +AI+ A     YY
Sbjct: 90  CTMCMSAITWAGFDNFYY 107


>gi|187925693|ref|YP_001897335.1| CMP/dCMP deaminase zinc-binding [Burkholderia phytofirmans PsJN]
 gi|187716887|gb|ACD18111.1| CMP/dCMP deaminase zinc-binding [Burkholderia phytofirmans PsJN]
          Length = 544

 Score = 49.5 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 17/48 (35%), Positives = 22/48 (45%), Gaps = 1/48 (2%)

Query: 53  HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
           HAE+ A+         EI     L+VT  PC  CA  I  A I  +Y+
Sbjct: 387 HAEMHALLSAGATHGNEI-RGGKLFVTTYPCHSCARHIVAAGISEVYF 433


>gi|237817040|ref|ZP_04596032.1| cytidine/deoxycytidylate deaminase family protein [Brucella abortus
           str. 2308 A]
 gi|237787853|gb|EEP62069.1| cytidine/deoxycytidylate deaminase family protein [Brucella abortus
           str. 2308 A]
          Length = 201

 Score = 49.5 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 17/90 (18%), Positives = 35/90 (38%), Gaps = 8/90 (8%)

Query: 16  QNAALRNEIPVGAVAVLNNK---IISRAGNRNRELKDVTAHAEILAIRMGCRILSQEI-- 70
           +          GA  + N+    +++   N      +   H E+  ++    +  +E   
Sbjct: 27  ERGVAEGNKVFGAALLRNSDLSLVLAETNNETE---NPLWHGEVHTLKRFYEMPEKERPD 83

Query: 71  LPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
             ++    T EPC+MC +AI+ +     YY
Sbjct: 84  TKDMVFLSTHEPCSMCLSAITWSGFDNFYY 113


>gi|327189580|gb|EGE56732.1| putative guanine/cytosine deaminase protein [Rhizobium etli
           CNPAF512]
          Length = 195

 Score = 49.1 bits (117), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 19/78 (24%), Positives = 35/78 (44%), Gaps = 6/78 (7%)

Query: 26  VGAVAVLNNK---IISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEP 82
            GA  +  +    +++     N EL++   H E+  ++    +  +    ++    T EP
Sbjct: 33  FGAAILRKSDLSLVVAE---TNNELENPLWHGEVHTLKRFYELGDKPATRDLIFLSTHEP 89

Query: 83  CTMCAAAISLARIRRLYY 100
           CTMC +AI+ A     YY
Sbjct: 90  CTMCMSAITWAGFDNFYY 107


>gi|29566057|ref|NP_817627.1| gp38 [Mycobacterium phage Bxz2]
 gi|29424782|gb|AAN01792.1| gp38 [Mycobacterium phage Bxz2]
 gi|323126199|gb|ADX30664.1| gp38 [Mycobacterium phage Wonder]
          Length = 127

 Score = 49.1 bits (117), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 26/123 (21%), Positives = 37/123 (30%), Gaps = 31/123 (25%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNR------------NRELKDVT 51
              F+  A   A  +       VGAV V + ++ +   N              R    + 
Sbjct: 6   DEYFLEIAKTVAIRSDCERSQ-VGAVVVKDRRVRATGYNGAPAGRPGCSTCPRRTSGAIP 64

Query: 52  A--------------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRR 97
                          HAE  A+        +E L    LY+T  PC  C   I  A I  
Sbjct: 65  GVSDYDSGVGRCVAVHAEANAL----LYCDREDLIGATLYITRAPCDGCRKLIDAAGIVN 120

Query: 98  LYY 100
           + Y
Sbjct: 121 VIY 123


>gi|194375476|dbj|BAG56683.1| unnamed protein product [Homo sapiens]
          Length = 119

 Score = 49.1 bits (117), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 15/48 (31%), Positives = 22/48 (45%), Gaps = 4/48 (8%)

Query: 53  HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
           HAE+ AI       +   +    +YV L PC  CA  I  A I+ + +
Sbjct: 25  HAELNAIMN----KNSTDVKGCSMYVALFPCNECAKLIIQAGIKEVIF 68


>gi|149914282|ref|ZP_01902813.1| riboflavin synthase subunit alpha [Roseobacter sp. AzwK-3b]
 gi|149811801|gb|EDM71634.1| riboflavin synthase subunit alpha [Roseobacter sp. AzwK-3b]
          Length = 365

 Score = 49.1 bits (117), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 16/79 (20%), Positives = 30/79 (37%), Gaps = 10/79 (12%)

Query: 75  DLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEI 128
            +YV+LEPC        C+ A+  A + R+    S+        G      A      E+
Sbjct: 69  TVYVSLEPCAHHGRTPPCSEALIAAGVARVVAPVSDSDPRVSGKGFARLRSAG----IEV 124

Query: 129 YPGISEQRSRQIIQDFFKE 147
             G+  + + + +  F + 
Sbjct: 125 TTGVLAEEAMRDLGGFLRR 143


>gi|62317491|ref|YP_223344.1| cytidine/deoxycytidylate deaminase family protein [Brucella abortus
           bv. 1 str. 9-941]
 gi|83269474|ref|YP_418765.1| cytidine/deoxycytidylate deaminase [Brucella melitensis biovar
           Abortus 2308]
 gi|189022743|ref|YP_001932484.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [Brucella
           abortus S19]
 gi|254690985|ref|ZP_05154239.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [Brucella
           abortus bv. 6 str. 870]
 gi|254695704|ref|ZP_05157532.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [Brucella
           abortus bv. 3 str. Tulya]
 gi|254698770|ref|ZP_05160598.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [Brucella
           abortus bv. 2 str. 86/8/59]
 gi|254732214|ref|ZP_05190792.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [Brucella
           abortus bv. 4 str. 292]
 gi|256256171|ref|ZP_05461707.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [Brucella
           abortus bv. 9 str. C68]
 gi|260544725|ref|ZP_05820546.1| cytidine/deoxycytidylate deaminase [Brucella abortus NCTC 8038]
 gi|260756580|ref|ZP_05868928.1| CMP/dCMP deaminase zinc-binding protein [Brucella abortus bv. 6
           str. 870]
 gi|260760011|ref|ZP_05872359.1| CMP/dCMP deaminase zinc-binding protein [Brucella abortus bv. 4
           str. 292]
 gi|260763251|ref|ZP_05875583.1| CMP/dCMP deaminase zinc-binding protein [Brucella abortus bv. 2
           str. 86/8/59]
 gi|260882399|ref|ZP_05894013.1| cytidine/deoxycytidylate deaminase [Brucella abortus bv. 9 str.
           C68]
 gi|261216111|ref|ZP_05930392.1| CMP/dCMP deaminase zinc-binding protein [Brucella abortus bv. 3
           str. Tulya]
 gi|297249532|ref|ZP_06933233.1| dCMP deaminase [Brucella abortus bv. 5 str. B3196]
 gi|62197684|gb|AAX75983.1| cytidine/deoxycytidylate deaminase family protein [Brucella abortus
           bv. 1 str. 9-941]
 gi|82939748|emb|CAJ12745.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [Brucella
           melitensis biovar Abortus 2308]
 gi|189021317|gb|ACD74038.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [Brucella
           abortus S19]
 gi|260097996|gb|EEW81870.1| cytidine/deoxycytidylate deaminase [Brucella abortus NCTC 8038]
 gi|260670329|gb|EEX57269.1| CMP/dCMP deaminase zinc-binding protein [Brucella abortus bv. 4
           str. 292]
 gi|260673672|gb|EEX60493.1| CMP/dCMP deaminase zinc-binding protein [Brucella abortus bv. 2
           str. 86/8/59]
 gi|260676688|gb|EEX63509.1| CMP/dCMP deaminase zinc-binding protein [Brucella abortus bv. 6
           str. 870]
 gi|260871927|gb|EEX78996.1| cytidine/deoxycytidylate deaminase [Brucella abortus bv. 9 str.
           C68]
 gi|260917718|gb|EEX84579.1| CMP/dCMP deaminase zinc-binding protein [Brucella abortus bv. 3
           str. Tulya]
 gi|297173401|gb|EFH32765.1| dCMP deaminase [Brucella abortus bv. 5 str. B3196]
          Length = 199

 Score = 49.1 bits (117), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 17/90 (18%), Positives = 35/90 (38%), Gaps = 8/90 (8%)

Query: 16  QNAALRNEIPVGAVAVLNNK---IISRAGNRNRELKDVTAHAEILAIRMGCRILSQEI-- 70
           +          GA  + N+    +++   N      +   H E+  ++    +  +E   
Sbjct: 25  ERGVAEGNKVFGAALLRNSDLSLVLAETNNETE---NPLWHGEVHTLKRFYEMPEKERPD 81

Query: 71  LPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
             ++    T EPC+MC +AI+ +     YY
Sbjct: 82  TKDMVFLSTHEPCSMCLSAITWSGFDNFYY 111


>gi|50086283|ref|YP_047793.1| putative cytidine / deoxycytidylate deaminase family protein
           [Acinetobacter sp. ADP1]
 gi|49532259|emb|CAG69971.1| putative cytidine / deoxycytidylate deaminase family protein
           [Acinetobacter sp. ADP1]
          Length = 519

 Score = 49.1 bits (117), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 17/58 (29%), Positives = 24/58 (41%), Gaps = 2/58 (3%)

Query: 53  HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGI 110
           HAE+ A+    R           L+VT  PC  CA  I  A I ++ +    PK   +
Sbjct: 371 HAEMDALLSCSRSNIST--QGATLFVTTFPCHNCAKHIISAGIEKVVFVEPYPKSKAL 426


>gi|209549234|ref|YP_002281151.1| CMP/dCMP deaminase zinc-binding [Rhizobium leguminosarum bv.
           trifolii WSM2304]
 gi|209534990|gb|ACI54925.1| CMP/dCMP deaminase zinc-binding [Rhizobium leguminosarum bv.
           trifolii WSM2304]
          Length = 195

 Score = 49.1 bits (117), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 19/78 (24%), Positives = 34/78 (43%), Gaps = 6/78 (7%)

Query: 26  VGAVAVLNNK---IISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEP 82
            GA  +  +    +++     N EL +   H E+  ++    +  +    ++    T EP
Sbjct: 33  FGAAILRKSDLSLVVAE---TNNELDNPLWHGEVHTLKRFYELGEKPATKDLIFLSTHEP 89

Query: 83  CTMCAAAISLARIRRLYY 100
           CTMC +AI+ A     YY
Sbjct: 90  CTMCMSAITWAGFDNFYY 107


>gi|241204550|ref|YP_002975646.1| CMP/dCMP deaminase zinc-binding [Rhizobium leguminosarum bv.
           trifolii WSM1325]
 gi|240858440|gb|ACS56107.1| CMP/dCMP deaminase zinc-binding [Rhizobium leguminosarum bv.
           trifolii WSM1325]
          Length = 195

 Score = 49.1 bits (117), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 19/88 (21%), Positives = 36/88 (40%), Gaps = 6/88 (6%)

Query: 16  QNAALRNEIPVGAVAVLNNK---IISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILP 72
           +          GA  +  +    +++     N EL++   H E+  ++    +  +    
Sbjct: 23  ERGVSLGNKVFGAAILRKSDLSLVVAE---TNNELENPLWHGEVHTLKRFYELGDKPPTK 79

Query: 73  EVDLYVTLEPCTMCAAAISLARIRRLYY 100
           ++    T EPCTMC +AI+ A     YY
Sbjct: 80  DLIFLSTHEPCTMCMSAITWAGFDNFYY 107


>gi|116252043|ref|YP_767881.1| guanine/cytosine deaminase [Rhizobium leguminosarum bv. viciae
           3841]
 gi|115256691|emb|CAK07779.1| putative guanine/cytosine deaminase [Rhizobium leguminosarum bv.
           viciae 3841]
          Length = 195

 Score = 49.1 bits (117), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 19/88 (21%), Positives = 36/88 (40%), Gaps = 6/88 (6%)

Query: 16  QNAALRNEIPVGAVAVLNNK---IISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILP 72
           +          GA  +  +    +++     N EL++   H E+  ++    +  +    
Sbjct: 23  ERGVSLGNKVFGAAILRKSDLSLVVAE---TNNELENPLWHGEVHTLKRFYELGDKPPTK 79

Query: 73  EVDLYVTLEPCTMCAAAISLARIRRLYY 100
           ++    T EPCTMC +AI+ A     YY
Sbjct: 80  DLIFLSTHEPCTMCMSAITWAGFDNFYY 107


>gi|111024048|ref|YP_707020.1| cytosine/ adenosine deaminase [Rhodococcus jostii RHA1]
 gi|110823578|gb|ABG98862.1| possible cytosine/ adenosine deaminase [Rhodococcus jostii RHA1]
          Length = 109

 Score = 49.1 bits (117), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 15/28 (53%), Positives = 17/28 (60%)

Query: 74  VDLYVTLEPCTMCAAAISLARIRRLYYG 101
             LY T EPC+MCA AI    + RL YG
Sbjct: 76  CTLYTTAEPCSMCAGAIDWGNVLRLVYG 103


>gi|218458238|ref|ZP_03498329.1| putative guanine/cytosine deaminase protein [Rhizobium etli Kim 5]
          Length = 188

 Score = 49.1 bits (117), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 19/88 (21%), Positives = 36/88 (40%), Gaps = 6/88 (6%)

Query: 16  QNAALRNEIPVGAVAVLNNK---IISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILP 72
           +          GA  +  +    +++     N EL++   H E+  ++    +  +    
Sbjct: 23  ERGVSLGNKVFGAAILRKSDLSLVVAE---TNNELENPLWHGEVHTLKRFYELGDKPATK 79

Query: 73  EVDLYVTLEPCTMCAAAISLARIRRLYY 100
           ++    T EPCTMC +AI+ A     YY
Sbjct: 80  DLIFLSTHEPCTMCMSAITWAGFDNFYY 107


>gi|254851304|ref|ZP_05240654.1| zinc-binding domain-containing protein [Vibrio cholerae MO10]
 gi|255743993|ref|ZP_05417947.1| deoxycytidylate deaminase-related protein [Vibrio cholera CIRS 101]
 gi|262153650|ref|ZP_06028777.1| deoxycytidylate deaminase-related protein [Vibrio cholerae INDRE
           91/1]
 gi|254847009|gb|EET25423.1| zinc-binding domain-containing protein [Vibrio cholerae MO10]
 gi|255738258|gb|EET93649.1| deoxycytidylate deaminase-related protein [Vibrio cholera CIRS 101]
 gi|262030591|gb|EEY49228.1| deoxycytidylate deaminase-related protein [Vibrio cholerae INDRE
           91/1]
          Length = 529

 Score = 49.1 bits (117), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 1/48 (2%)

Query: 53  HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
           HAE+ ++ +     ++E   +  LYVT  PC  CA  I  A I+++ Y
Sbjct: 379 HAEMDSL-IALARNNKETSVDKTLYVTTYPCHNCARHIVAAGIKKVVY 425


>gi|15640205|ref|NP_229832.1| deoxycytidylate deaminase-related protein [Vibrio cholerae O1
           biovar El Tor str. N16961]
 gi|153821594|ref|ZP_01974261.1| zinc-binding domain protein [Vibrio cholerae B33]
 gi|229509388|ref|ZP_04398871.1| deoxycytidylate deaminase-related protein [Vibrio cholerae B33]
 gi|229516335|ref|ZP_04405783.1| deoxycytidylate deaminase-related protein [Vibrio cholerae RC9]
 gi|229605681|ref|YP_002876385.1| deoxycytidylate deaminase-related protein [Vibrio cholerae MJ-1236]
 gi|229606526|ref|YP_002877174.1| deoxycytidylate deaminase-related protein [Vibrio cholerae MJ-1236]
 gi|9654579|gb|AAF93351.1| deoxycytidylate deaminase-related protein [Vibrio cholerae O1
           biovar El Tor str. N16961]
 gi|126520881|gb|EAZ78104.1| zinc-binding domain protein [Vibrio cholerae B33]
 gi|229346761|gb|EEO11731.1| deoxycytidylate deaminase-related protein [Vibrio cholerae RC9]
 gi|229353703|gb|EEO18640.1| deoxycytidylate deaminase-related protein [Vibrio cholerae B33]
 gi|229369181|gb|ACQ59604.1| deoxycytidylate deaminase-related protein [Vibrio cholerae MJ-1236]
 gi|229372167|gb|ACQ62589.1| deoxycytidylate deaminase-related protein [Vibrio cholerae MJ-1236]
          Length = 532

 Score = 49.1 bits (117), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 1/48 (2%)

Query: 53  HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
           HAE+ ++ +     ++E   +  LYVT  PC  CA  I  A I+++ Y
Sbjct: 382 HAEMDSL-IALARNNKETSVDKTLYVTTYPCHNCARHIVAAGIKKVVY 428


>gi|218508930|ref|ZP_03506808.1| putative guanine/cytosine deaminase protein [Rhizobium etli Brasil
           5]
          Length = 163

 Score = 48.8 bits (116), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 19/78 (24%), Positives = 35/78 (44%), Gaps = 6/78 (7%)

Query: 26  VGAVAVLNNK---IISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEP 82
            GA  +  +    +++     N EL++   H E+  ++    +  +    ++    T EP
Sbjct: 1   FGAAILRKSDLSLVVAE---TNNELENPLWHGEVHTLKRFYELGDKPATRDLIFLSTHEP 57

Query: 83  CTMCAAAISLARIRRLYY 100
           CTMC +AI+ A     YY
Sbjct: 58  CTMCMSAITWAGFDNFYY 75


>gi|218673827|ref|ZP_03523496.1| putative guanine/cytosine deaminase protein [Rhizobium etli GR56]
          Length = 195

 Score = 48.8 bits (116), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 19/78 (24%), Positives = 35/78 (44%), Gaps = 6/78 (7%)

Query: 26  VGAVAVLNNK---IISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEP 82
            GA  +  +    +++     N EL++   H E+  ++    +  +    ++    T EP
Sbjct: 33  FGAAILRKSDLSLVVAE---TNNELENPLWHGEVHTLKRFYELGDKPATKDLIFLSTHEP 89

Query: 83  CTMCAAAISLARIRRLYY 100
           CTMC +AI+ A     YY
Sbjct: 90  CTMCMSAITWAGFDNFYY 107


>gi|118389922|ref|XP_001028006.1| Cytidine and deoxycytidylate deaminase zinc-binding region family
           protein [Tetrahymena thermophila]
 gi|89309776|gb|EAS07764.1| Cytidine and deoxycytidylate deaminase zinc-binding region family
           protein [Tetrahymena thermophila SB210]
          Length = 354

 Score = 48.8 bits (116), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 30/122 (24%), Positives = 43/122 (35%), Gaps = 34/122 (27%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRN------------RELKDV 50
              FM  A+E  + +   N+  VGA+ +    +I+S   N                    
Sbjct: 205 DEYFMRLAVEVKKRS-NCNKRSVGAILISKEKRILSTGYNGTPLRMKDCFYGGCERCNQN 263

Query: 51  TA-----------HAEILAI-RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98
           TA           HAE   +  +G R   Q    E  +Y TL PC MCA       + R+
Sbjct: 264 TAQGQGLDQCWCIHAEENCLLDIGVRESKQF---EPTMYTTLFPCRMCAK-----GVTRI 315

Query: 99  YY 100
            Y
Sbjct: 316 VY 317


>gi|289628393|ref|ZP_06461347.1| riboflavin biosynthesis protein RibD [Pseudomonas syringae pv.
          aesculi str. NCPPB3681]
          Length = 60

 Score = 48.8 bits (116), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 14/55 (25%), Positives = 22/55 (40%), Gaps = 6/55 (10%)

Query: 4  GNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56
             +M+ ALE A+N          VG V V + +I+    +          HAE+
Sbjct: 9  DVHYMARALELARNGLYSTHPNPRVGCVIVRDGQIVGEGWHVRAGE----PHAEV 59


>gi|309704924|emb|CBJ04275.1| putative deoxycytidylate deaminase [Escherichia coli ETEC H10407]
          Length = 532

 Score = 48.8 bits (116), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 1/48 (2%)

Query: 53  HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
           HAE+  I    R  S E      LY T  PC  CA  I  + ++++ Y
Sbjct: 384 HAEMDVITTMARK-SSEGTKGKTLYTTTYPCHNCARHIVSSGMKKVIY 430


>gi|116748688|ref|YP_845375.1| zinc-binding CMP/dCMP deaminase [Syntrophobacter fumaroxidans MPOB]
 gi|116697752|gb|ABK16940.1| CMP/dCMP deaminase, zinc-binding [Syntrophobacter fumaroxidans
           MPOB]
          Length = 170

 Score = 48.8 bits (116), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 27/145 (18%), Positives = 41/145 (28%), Gaps = 49/145 (33%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGN---------RNRELKDVT 51
           M     F+  A   A N+       +GA+ V +  IIS   N           R + D +
Sbjct: 1   MDWDRYFLEIATAVANNSKCL-SRKIGALLVRDKSIISTGYNGPPRGVPHCNRRYVIDPS 59

Query: 52  -----------------------------------AHAEILAIRMGCRILSQEILPEVDL 76
                                              +HAE+  I    R     +     L
Sbjct: 60  VSAIMPTHMMGKEMDLCPRKALGYKSGEGLHLCIASHAEVNCINNAARNGICTL--GSTL 117

Query: 77  YVTLE--PCTMCAAAISLARIRRLY 99
           Y++    PC  C   I  A I+ + 
Sbjct: 118 YLSSAFLPCKNCLCEIINAGIKEIV 142


>gi|171689046|ref|XP_001909463.1| hypothetical protein [Podospora anserina S mat+]
 gi|170944485|emb|CAP70596.1| unnamed protein product [Podospora anserina S mat+]
          Length = 415

 Score = 48.8 bits (116), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 30/172 (17%), Positives = 57/172 (33%), Gaps = 58/172 (33%)

Query: 6   VFMSCALEEAQNAALRN-EIPVGAVAVLNNK----IISRAGNRNRELK-------DVTAH 53
           ++MS A + A  +  +     +GA  +   +    I++ AG+     +       +  AH
Sbjct: 203 IWMSLAHQVAHQSEAKGYGEAMGACVIQREEDKTTIVALAGDARWCQRGKCGDGGNPMAH 262

Query: 54  AEILAIRMGCRIL-----------------------------------------SQEILP 72
             + AI M  + L                                            +  
Sbjct: 263 CVMRAISMVAQKLVRCENRQTRTNPEPILEYECFQDKPLFEDERKVFELEHPSPDGYLCH 322

Query: 73  EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH 124
            +++Y+T EPC MC+ AI  +R+ ++ +    P  GG+           C H
Sbjct: 323 GLEMYLTHEPCVMCSMAILHSRMGKVVFRHRMPLTGGLS-----AEDRGCGH 369


>gi|167769166|ref|ZP_02441219.1| hypothetical protein ANACOL_00489 [Anaerotruncus colihominis DSM
           17241]
 gi|167668806|gb|EDS12936.1| hypothetical protein ANACOL_00489 [Anaerotruncus colihominis DSM
           17241]
          Length = 167

 Score = 48.8 bits (116), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 31/143 (21%), Positives = 44/143 (30%), Gaps = 47/143 (32%)

Query: 2   KKGNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAG--------N-------RN 44
            K N ++  A   A+      RN    GA+ V N++I+S           N         
Sbjct: 9   DKINYYLDIAETVAERGTCLRRN---FGAIIVNNDQIVSTGYVGAPRGRENCSDLGYCTR 65

Query: 45  RELKDVTA---------HAEILAIRMGCRILSQEILPEVDLYVTLE------------PC 83
             LK             HAE+ AI    R      +    LY+               PC
Sbjct: 66  ERLKVPRGERYELCRSVHAEMNAIIHAAR----SEMLGATLYLVGREVSDGSYVKNACPC 121

Query: 84  TMCAAAISLARIRRLYYGASNPK 106
           +MC   I  A I  +     + K
Sbjct: 122 SMCTRLIINAGIATVI--VRDDK 142


>gi|169607064|ref|XP_001796952.1| hypothetical protein SNOG_06585 [Phaeosphaeria nodorum SN15]
 gi|111065296|gb|EAT86416.1| hypothetical protein SNOG_06585 [Phaeosphaeria nodorum SN15]
          Length = 189

 Score = 48.4 bits (115), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 33/131 (25%), Positives = 48/131 (36%), Gaps = 33/131 (25%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIP----VGAVAV--LNNKIISRAGNRNRELKDVTAHAE 55
                +M  AL++AQ +  +   P    VGA+ V      I+SR      E      HAE
Sbjct: 25  NNHLQYMLLALDQAQESPPK---PSNFRVGALLVDADTGAILSRGYTLECEGN---THAE 78

Query: 56  ILAIRMGCRI--LSQEIL-----PEVDLYVTLEPC-------TMCAAAIS----LAR--- 94
              +    +   L +E +     P   +Y T+EPC         C   I     L     
Sbjct: 79  QCCLLKYAQAHDLPEERVGEALPPNTVIYTTMEPCNLRLSGNLPCVDRIIRTTSLNGDRT 138

Query: 95  IRRLYYGASNP 105
           I+R+Y G   P
Sbjct: 139 IKRVYLGVQEP 149


>gi|218528359|ref|YP_002419175.1| CMP/dCMP deaminase zinc-binding [Methylobacterium chloromethanicum
           CM4]
 gi|218520662|gb|ACK81247.1| CMP/dCMP deaminase zinc-binding [Methylobacterium chloromethanicum
           CM4]
          Length = 569

 Score = 48.4 bits (115), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 19/54 (35%), Positives = 24/54 (44%), Gaps = 2/54 (3%)

Query: 53  HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPK 106
           HAE+ AI    R      +    LY T  PC MC+  I  A + R+ Y    PK
Sbjct: 359 HAEMSAISDAARSGIS--IKSSILYCTTFPCHMCSKHIVAAGLARVAYIEPYPK 410


>gi|9392602|gb|AAF87213.1|AF228578_2 unknown [Rhizobium leguminosarum bv. viciae]
          Length = 195

 Score = 48.4 bits (115), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 19/88 (21%), Positives = 37/88 (42%), Gaps = 6/88 (6%)

Query: 16  QNAALRNEIPVGAVAVLNNK---IISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILP 72
           +          GA  +  +    +++     N EL++   H E+  ++    +  ++   
Sbjct: 23  ERGVSLGNKVFGAAILRKSDLSLVVAE---TNNELENPLWHGEVHTLKRFYELGDKQPTK 79

Query: 73  EVDLYVTLEPCTMCAAAISLARIRRLYY 100
           ++    T EPCTMC +AI+ A     YY
Sbjct: 80  DLIFLSTHEPCTMCMSAITWAGFDNFYY 107


>gi|227821868|ref|YP_002825838.1| putative guanine/cytosine deaminase [Sinorhizobium fredii NGR234]
 gi|227340867|gb|ACP25085.1| putative guanine/cytosine deaminase [Sinorhizobium fredii NGR234]
          Length = 195

 Score = 48.4 bits (115), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 16/87 (18%), Positives = 31/87 (35%), Gaps = 6/87 (6%)

Query: 17  NAALRNEIPVGAVAVLNNK---IISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPE 73
                     GA  +       +++   N      +   H E+  ++    +  +    +
Sbjct: 24  KGVAAGNKVFGAAILRKADLSLVLAETNNETE---NPLWHGEVHTLKRFYEMAEKRDTRD 80

Query: 74  VDLYVTLEPCTMCAAAISLARIRRLYY 100
           +    T EPC+MC +AI+ A     YY
Sbjct: 81  LIFLSTHEPCSMCLSAITWAGFDNFYY 107


>gi|307107941|gb|EFN56182.1| hypothetical protein CHLNCDRAFT_13299 [Chlorella variabilis]
          Length = 118

 Score = 48.4 bits (115), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 25/116 (21%), Positives = 39/116 (33%), Gaps = 27/116 (23%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKII-SRAGN--------------RNR 45
           +   + FM+ A   AQ +   N+  VGA  V  N +I     N              +  
Sbjct: 8   LSWDDYFMAVAFLSAQRSKDPNKQ-VGACIVDRNNVICGIGYNGFPRGCPDSKLPWAKKS 66

Query: 46  ELKDVTA-------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLAR 94
              D          HAE+ AI       +   +    ++VT+ PC  CA  +    
Sbjct: 67  RRGDPLDTKYPYVCHAEMNAILN----KNGASVEGAKVFVTMFPCNECAKLMIQVG 118


>gi|268608090|ref|ZP_06141818.1| CMP/dCMP deaminase, zinc-binding protein [Ruminococcus flavefaciens
           FD-1]
          Length = 164

 Score = 48.4 bits (115), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 25/108 (23%), Positives = 37/108 (34%), Gaps = 39/108 (36%)

Query: 27  GAVAVLNNKIISRAGN-----------RNRELKDVTA-------------HAEILAIRMG 62
           GAV V N+ ++S   N           R    +                 HAE  A+   
Sbjct: 35  GAVIVKNDAVVSTGYNGSPRGTENCCDRGECPRMALGLHQGEGYAMCRAVHAEANALLN- 93

Query: 63  CRILSQEILPEVDLYVTL-----------EPCTMCAAAISLARIRRLY 99
               S++     DLY+T            +PC +CA  I  A I+ +Y
Sbjct: 94  ---CSRDQTVGADLYLTGVNPEDGSVHMAKPCPLCARMIIQAGIKNVY 138


>gi|168015441|ref|XP_001760259.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162688639|gb|EDQ75015.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 1187

 Score = 48.4 bits (115), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 15/91 (16%), Positives = 27/91 (29%), Gaps = 17/91 (18%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLN--NKIISRAGNRNRELKD---------- 49
           +    FM  A+ +A+ A    ++  GAV V      +I+   ++     +          
Sbjct: 289 ETARKFMKEAVSQARLAHSSGQLANGAVIVDPFLRSVIAWGHDQCTSTTNYCLEPGEDKE 348

Query: 50  -----VTAHAEILAIRMGCRILSQEILPEVD 75
                   HA + AI M              
Sbjct: 349 KRLRHPLRHAVMEAISMAADRDHLLFPSNCT 379


>gi|255322011|ref|ZP_05363161.1| riboflavin biosynthesis protein RibD [Campylobacter showae RM3277]
 gi|255301115|gb|EET80382.1| riboflavin biosynthesis protein RibD [Campylobacter showae RM3277]
          Length = 371

 Score = 48.4 bits (115), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 30/197 (15%), Positives = 58/197 (29%), Gaps = 63/197 (31%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVLN-NKIISRAGNRNRELKDVTAHAEI 56
           M     +MS A+++A         P   VG V + +  +++S A ++         HAE 
Sbjct: 1   MINDEFYMSLAIKKAWE-FQILTYPNPAVGCVILDSSGRLLSVAAHKKAGFL----HAEP 55

Query: 57  LAIRMG-CRIL------------------------------------------SQEILPE 73
            AI +  C+                                              ++L  
Sbjct: 56  SAILLALCQKCEAFLRDFLRDYHAALGVKFENAAELENADLEPNFTYEYILQNHGDLLKG 115

Query: 74  VDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
              YVTLEPC        CA  +S  +   +     +        G      +       
Sbjct: 116 AKAYVTLEPCAHRGKTPPCAELLSRLKFAEVVIARGDENTVASG-GANILKSSG----IS 170

Query: 128 IYPGISEQRSRQIIQDF 144
           +   +  + + ++++ F
Sbjct: 171 VKFDVLRREADELVEPF 187


>gi|329765297|ref|ZP_08256877.1| CMP/dCMP deaminase, zinc-binding domain-containing protein
           [Candidatus Nitrosoarchaeum limnia SFB1]
 gi|329138203|gb|EGG42459.1| CMP/dCMP deaminase, zinc-binding domain-containing protein
           [Candidatus Nitrosoarchaeum limnia SFB1]
          Length = 187

 Score = 48.4 bits (115), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 26/123 (21%), Positives = 39/123 (31%), Gaps = 28/123 (22%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGN--------------RNRELKD 49
              FM  A E A+  +      VGAV V  N+ ++   N              R  +L+ 
Sbjct: 23  DEYFMLQA-ELAKLRSNCMTRQVGAVIVRKNRQLATGYNGTPPGIKNCFEGGCRRCQLRM 81

Query: 50  -------------VTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIR 96
                        +  HAE  AI     +  +  +    LY T  PC  C        I+
Sbjct: 82  EGKIESGASLDRCLCNHAEANAIMHCAILGIEAGIAGAILYTTFVPCLECTKMAITIGIK 141

Query: 97  RLY 99
           +  
Sbjct: 142 KFV 144


>gi|302662333|ref|XP_003022823.1| hypothetical protein TRV_03047 [Trichophyton verrucosum HKI 0517]
 gi|291186788|gb|EFE42205.1| hypothetical protein TRV_03047 [Trichophyton verrucosum HKI 0517]
          Length = 298

 Score = 48.4 bits (115), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 20/79 (25%), Positives = 30/79 (37%), Gaps = 16/79 (20%)

Query: 4   GNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGNRN-RELKDV---------- 50
              FM  A   AQ +    R    VG V V +N+++S   N   R +K+           
Sbjct: 191 DQYFMQLASLAAQRSNCMKRR---VGCVIVKDNRVMSTGYNGTPRNMKNCNEGGFLSTCL 247

Query: 51  TAHAEILAIRMGCRILSQE 69
             HAE  A+    ++   E
Sbjct: 248 CMHAEENALLEAAQLGISE 266


>gi|70989807|ref|XP_749753.1| deoxycytidylate deaminase [Aspergillus fumigatus Af293]
 gi|66847384|gb|EAL87715.1| deoxycytidylate deaminase, putative [Aspergillus fumigatus Af293]
 gi|159129162|gb|EDP54276.1| deoxycytidylate deaminase, putative [Aspergillus fumigatus A1163]
          Length = 370

 Score = 48.0 bits (114), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 29/147 (19%), Positives = 37/147 (25%), Gaps = 56/147 (38%)

Query: 4   GNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAG--------NRNR-------- 45
              FM  A   AQ +    R    VG V V   ++IS           N N         
Sbjct: 191 DLYFMQLASLAAQRSNCMKRR---VGCVLVRERRVISTGYNGTPRHLTNCNEGGCMKPPE 247

Query: 46  -----------ELKDVTA---------------------HAEILAIRMGCRILSQEILPE 73
                        +D                        HAE  A+    R   +E    
Sbjct: 248 SLQLSLILSCCSKRDSHRLGPRCNRGEGGGVGLSTCLCLHAEENALLEAGRERIRE---G 304

Query: 74  VDLYVTLEPCTMCAAAISLARIRRLYY 100
             LY    PC  C   I+   I  + Y
Sbjct: 305 SILYCDTCPCLTCTVKIAQVGISEVVY 331


>gi|325660961|ref|ZP_08149588.1| hypothetical protein HMPREF0490_00320 [Lachnospiraceae bacterium
           4_1_37FAA]
 gi|331085330|ref|ZP_08334416.1| hypothetical protein HMPREF0987_00719 [Lachnospiraceae bacterium
           9_1_43BFAA]
 gi|325472468|gb|EGC75679.1| hypothetical protein HMPREF0490_00320 [Lachnospiraceae bacterium
           4_1_37FAA]
 gi|330408113|gb|EGG87603.1| hypothetical protein HMPREF0987_00719 [Lachnospiraceae bacterium
           9_1_43BFAA]
          Length = 161

 Score = 48.0 bits (114), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 26/110 (23%), Positives = 36/110 (32%), Gaps = 40/110 (36%)

Query: 27  GAVAVLNNKIISRAG-NRNRELKDVTA-----------------------HAEILAIRMG 62
           GAV V N+++IS       R  K+ T                        HAE  AI   
Sbjct: 28  GAVIVKNDEVISTGYAGAPRGRKNCTDINMCIREKLKIPRGERYELCRSVHAEANAIISA 87

Query: 63  CRILSQEILPEVDLYVTL------------EPCTMCAAAISLARIRRLYY 100
            R    + +    LY+T               C+MC   I  A I ++Y 
Sbjct: 88  SR----DKMIGSSLYLTGIDMKTNDYVENSNSCSMCKKMIINAGIDKVYI 133


>gi|239834053|ref|ZP_04682381.1| CMP/dCMP deaminase zinc-binding [Ochrobactrum intermedium LMG 3301]
 gi|239822116|gb|EEQ93685.1| CMP/dCMP deaminase zinc-binding [Ochrobactrum intermedium LMG 3301]
          Length = 199

 Score = 48.0 bits (114), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 15/90 (16%), Positives = 33/90 (36%), Gaps = 8/90 (8%)

Query: 16  QNAALRNEIPVGAVAVLNNK---IISRAGNRNRELKDVTAHAEILAIRMGCRI--LSQEI 70
           +          GA  +  +    +++   N      +   H E+  ++    +    +  
Sbjct: 25  ERGVAEGNKVFGAALLRKSDLSLVLAETNNETE---NPLWHGEVHTLKRFYEMPENGRPD 81

Query: 71  LPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
             ++    T EPC+MC +AI+ +     YY
Sbjct: 82  TKDMVFLSTHEPCSMCLSAITWSGFDNFYY 111


>gi|153011088|ref|YP_001372302.1| CMP/dCMP deaminase zinc-binding [Ochrobactrum anthropi ATCC 49188]
 gi|151562976|gb|ABS16473.1| CMP/dCMP deaminase zinc-binding [Ochrobactrum anthropi ATCC 49188]
          Length = 199

 Score = 48.0 bits (114), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 15/90 (16%), Positives = 33/90 (36%), Gaps = 8/90 (8%)

Query: 16  QNAALRNEIPVGAVAVLNNK---IISRAGNRNRELKDVTAHAEILAIRMGCRI--LSQEI 70
           +          GA  +  +    +++   N      +   H E+  ++    +    +  
Sbjct: 25  ERGVAEGNKVFGAALLRKSDLSLVLAETNNETE---NPLWHGEVHTLKRFYEMPENGRPD 81

Query: 71  LPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
             ++    T EPC+MC +AI+ +     YY
Sbjct: 82  TKDMVFLSTHEPCSMCLSAITWSGFDNFYY 111


>gi|310799772|gb|EFQ34665.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Glomerella graminicola M1.001]
          Length = 224

 Score = 48.0 bits (114), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 17/89 (19%), Positives = 32/89 (35%), Gaps = 22/89 (24%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKD----VTAHAEILAIRMGCRILSQEILPE-------- 73
            GA  + +  + +          D       H EI  I+        ++ P+        
Sbjct: 41  FGAAILSSTTLEA----LTVATNDERASPLLHGEINCIQQ----FFTDVFPDPATRPSPR 92

Query: 74  --VDLYVTLEPCTMCAAAISLARIRRLYY 100
                + T EPC++C + I+ +  R +YY
Sbjct: 93  TACVFFATHEPCSLCLSGIAWSGFREVYY 121


>gi|218660442|ref|ZP_03516372.1| nucleoside triphosphate pyrophosphohydrolase [Rhizobium etli
           IE4771]
          Length = 465

 Score = 48.0 bits (114), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 19/88 (21%), Positives = 36/88 (40%), Gaps = 6/88 (6%)

Query: 16  QNAALRNEIPVGAVAVLNNK---IISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILP 72
           +          GA  +  +    +++     N EL++   H E+  ++    +  +    
Sbjct: 43  ERGVSLGNKVFGAAILRKSDLSLVVAE---TNNELENPLWHGEVHTLKRFYELGDKPATK 99

Query: 73  EVDLYVTLEPCTMCAAAISLARIRRLYY 100
           ++    T EPCTMC +AI+ A     YY
Sbjct: 100 DLIFLSTHEPCTMCMSAITWAGFDNFYY 127


>gi|322698022|gb|EFY89796.1| DRAP deaminase [Metarhizium acridum CQMa 102]
          Length = 235

 Score = 48.0 bits (114), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 36/138 (26%), Positives = 49/138 (35%), Gaps = 42/138 (30%)

Query: 2   KKGNVFMSCALEEAQNA-ALRNEIPVGAVAVLN--NKIISRAG------------NRNRE 46
              + FM  AL++A+ + A   E  VGAV V +  N+I+S               N + E
Sbjct: 68  NDHHSFMEYALKQARLSPAAHAEFCVGAVLVDSQVNRILSAGYSMELPSPVGDQGNTHAE 127

Query: 47  LKD----------VTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM-------CAAA 89
                          AHAE   IR               LY T+EPC+        C   
Sbjct: 128 QCCFIKVALAHNLPPAHAE-DHIRHVLPAR-------TVLYTTMEPCSHRLSGNTTCVER 179

Query: 90  ISLAR--IRRLYYGASNP 105
           I   +  IR +Y G   P
Sbjct: 180 ILKLKGVIRSVYVGIRQP 197


>gi|260438412|ref|ZP_05792228.1| putative dCMP deaminase [Butyrivibrio crossotus DSM 2876]
 gi|292808998|gb|EFF68203.1| putative dCMP deaminase [Butyrivibrio crossotus DSM 2876]
          Length = 162

 Score = 48.0 bits (114), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 27/132 (20%), Positives = 40/132 (30%), Gaps = 33/132 (25%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAG--------NR-------NR 45
           + K N ++  A   ++      +   GAV V N++IIS           N          
Sbjct: 4   LDKYNYYLDIAESVSKRGTCLRKR-YGAVIVKNDEIISTGYVGAPRGRKNCSDLGYCIRN 62

Query: 46  ELKDVTA---------HAEILAIRMGCR--------ILSQEILPEVDLYVTLEPCTMCAA 88
           +L              HAE  AI    R         L    L +         C+MC  
Sbjct: 63  KLNIPRGERYELCRSVHAEANAIISASRDKMIDSTLFLVGIELSDNTYVKNACCCSMCKR 122

Query: 89  AISLARIRRLYY 100
            I  A I+ +  
Sbjct: 123 TIINAGIKTVVI 134


>gi|251796204|ref|YP_003010935.1| CMP/dCMP deaminase zinc-binding [Paenibacillus sp. JDR-2]
 gi|247543830|gb|ACT00849.1| CMP/dCMP deaminase zinc-binding [Paenibacillus sp. JDR-2]
          Length = 176

 Score = 47.6 bits (113), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 22/129 (17%), Positives = 40/129 (31%), Gaps = 37/129 (28%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGN-RNRELKDV------------ 50
              FM  A   +  +       VG+V V   K++  A N     ++D             
Sbjct: 13  DTYFMDIAYMVSTRSRCSRRH-VGSVLVQGKKLLGTAYNGAPMGVQDCSEAGCMITEEWE 71

Query: 51  -------------------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAIS 91
                              T HAE    +       +       +YVT +PC  CA  ++
Sbjct: 72  TRIGDNGQEHMVKKQRCIRTIHAE----QNLLLFTDRADREGSTVYVTDQPCWTCANMLA 127

Query: 92  LARIRRLYY 100
            + ++ + +
Sbjct: 128 NSGVKEIVF 136


>gi|226287511|gb|EEH43024.1| deoxycytidylate deaminase [Paracoccidioides brasiliensis Pb18]
          Length = 347

 Score = 47.6 bits (113), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 26/122 (21%), Positives = 33/122 (27%), Gaps = 38/122 (31%)

Query: 4   GNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGNRN-RELKDV---------- 50
              FM  A   AQ +    R    VG V V   ++IS   N   R  K+           
Sbjct: 186 DQYFMQLASLAAQRSNCMKRR---VGCVIVREKRVISTGYNGTPRNTKNCNEGGCPRCNC 242

Query: 51  ------------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98
                         HAE  A+    R    E      LY            I+   I  +
Sbjct: 243 GEGGGAALSTCLCIHAEENALLEAGRERIGE---AAILYCN-------TVKIAQLGISEV 292

Query: 99  YY 100
            Y
Sbjct: 293 VY 294


>gi|161528455|ref|YP_001582281.1| CMP/dCMP deaminase zinc-binding [Nitrosopumilus maritimus SCM1]
 gi|160339756|gb|ABX12843.1| CMP/dCMP deaminase zinc-binding [Nitrosopumilus maritimus SCM1]
          Length = 200

 Score = 47.6 bits (113), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 30/124 (24%), Positives = 40/124 (32%), Gaps = 30/124 (24%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRN------------------- 44
              FM  A E A+  +      VGAV V N++ ++   N                     
Sbjct: 37  DEYFMLQA-ELAKLRSNCITRQVGAVIVRNHRQLATGYNGTPPGIKNCFDGGCKRCQLRM 95

Query: 45  --------RELKDVTAHAEILAIRMGCRILSQEI-LPEVDLYVTLEPCTMCAAAISLARI 95
                      + +  HAE  AI M C IL  E  +    LY T  PC  C        I
Sbjct: 96  EGKIESGASLDRCLCNHAEANAI-MHCAILGIEAGIEGAVLYTTFVPCLECTKMAITIGI 154

Query: 96  RRLY 99
           R+  
Sbjct: 155 RKFV 158


>gi|168057508|ref|XP_001780756.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162667774|gb|EDQ54395.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 598

 Score = 47.6 bits (113), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 23/112 (20%), Positives = 36/112 (32%), Gaps = 18/112 (16%)

Query: 2   KKGNVFMSCALEEA-QNAALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
              +  +  A E A   A L    P  G V     K++       +  K     AE+ A+
Sbjct: 23  SDDSRHLLRAAELAGSLAGLSAPHPNFGCVIAHGPKVVGEGFLYAQGTKS----AEVQAV 78

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAA------AISLARIRRLYYGASNP 105
                +           Y+ LEP   C        A+  A + R+  G  +P
Sbjct: 79  ERAGELAKN-----ATAYLNLEPGD-CHGDDSAVRALREAGVSRVVVGVPHP 124


>gi|225678025|gb|EEH16309.1| dCMP deaminase [Paracoccidioides brasiliensis Pb03]
          Length = 347

 Score = 47.6 bits (113), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 26/122 (21%), Positives = 33/122 (27%), Gaps = 38/122 (31%)

Query: 4   GNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGNRN-RELKDV---------- 50
              FM  A   AQ +    R    VG V V   ++IS   N   R  K+           
Sbjct: 186 DQYFMQLASLAAQRSNCMKRR---VGCVIVREKRVISTGYNGTPRNTKNCNEGGCPRCNC 242

Query: 51  ------------TAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRL 98
                         HAE  A+    R    E      LY            I+   I  +
Sbjct: 243 GEGGGAALSTCLCIHAEENALLEAGRERIGE---AAILYCN-------TVKIAQLGISEV 292

Query: 99  YY 100
            Y
Sbjct: 293 VY 294


>gi|227488843|ref|ZP_03919159.1| diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Corynebacterium glucuronolyticum ATCC 51867]
 gi|227091265|gb|EEI26577.1| diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Corynebacterium glucuronolyticum ATCC 51867]
          Length = 277

 Score = 47.6 bits (113), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 18/79 (22%), Positives = 26/79 (32%), Gaps = 15/79 (18%)

Query: 57  LAIRMGCRILSQEILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGI 110
           +A+R        E       YVTLEPC        C+ A+  A I  + Y   +      
Sbjct: 1   MALRAAG-----EDARGATAYVTLEPCNHTGRTGPCSHALVEAGIATVVYLTPDTSTPEA 55

Query: 111 ENGTQFYTLATCHHSPEIY 129
             G  +       H  E+ 
Sbjct: 56  AGGGDYLKS----HGVEVE 70


>gi|254720359|ref|ZP_05182170.1| CMP/dCMP deaminase zinc-binding protein [Brucella sp. 83/13]
 gi|265985378|ref|ZP_06098113.1| CMP/dCMP deaminase zinc-binding protein [Brucella sp. 83/13]
 gi|306837454|ref|ZP_07470330.1| CMP/dCMP deaminase zinc-binding protein [Brucella sp. NF 2653]
 gi|264663970|gb|EEZ34231.1| CMP/dCMP deaminase zinc-binding protein [Brucella sp. 83/13]
 gi|306407497|gb|EFM63700.1| CMP/dCMP deaminase zinc-binding protein [Brucella sp. NF 2653]
          Length = 199

 Score = 47.6 bits (113), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 16/90 (17%), Positives = 34/90 (37%), Gaps = 8/90 (8%)

Query: 16  QNAALRNEIPVGAVAVLNNK---IISRAGNRNRELKDVTAHAEILAIRMGCRILSQEI-- 70
           +          GA  +  +    +++   N      +   H E+  ++    +  +E   
Sbjct: 25  ERGVAEGNKVFGAALLRKSDLSLVLAETNNETE---NPLWHGEVHTLKRFYEMPEKERPD 81

Query: 71  LPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
             ++    T EPC+MC +AI+ +     YY
Sbjct: 82  TKDMVFLSTHEPCSMCLSAITWSGFDNFYY 111


>gi|262165120|ref|ZP_06032857.1| tRNA-specific adenosine-34 deaminase [Vibrio mimicus VM223]
 gi|262024836|gb|EEY43504.1| tRNA-specific adenosine-34 deaminase [Vibrio mimicus VM223]
          Length = 51

 Score = 47.6 bits (113), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 9/36 (25%), Positives = 16/36 (44%)

Query: 114 TQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
              +     +H   +  G+ E+  R  +Q FF+ RR
Sbjct: 1   MDLFNSQASYHYATVEKGLLEEECRAQLQAFFQRRR 36


>gi|155371563|ref|YP_001427097.1| hypothetical protein ATCV1_Z616L [Acanthocystis turfacea Chlorella
           virus 1]
 gi|155124883|gb|ABT16750.1| hypothetical protein ATCV1_Z616L [Acanthocystis turfacea Chlorella
           virus 1]
          Length = 149

 Score = 47.6 bits (113), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 16/47 (34%), Positives = 22/47 (46%), Gaps = 2/47 (4%)

Query: 53  HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLY 99
           HAE  AI    R  ++  L    +  TL PC  CA  I  A I+++ 
Sbjct: 67  HAEANAICTAARNGAK--LDGGSIVSTLFPCDQCARLIIQAGIKKVV 111


>gi|306845712|ref|ZP_07478281.1| CMP/dCMP deaminase zinc-binding protein [Brucella sp. BO1]
 gi|306274033|gb|EFM55860.1| CMP/dCMP deaminase zinc-binding protein [Brucella sp. BO1]
          Length = 199

 Score = 47.6 bits (113), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 16/90 (17%), Positives = 34/90 (37%), Gaps = 8/90 (8%)

Query: 16  QNAALRNEIPVGAVAVLNNK---IISRAGNRNRELKDVTAHAEILAIRMGCRILSQEI-- 70
           +          GA  +  +    +++   N      +   H E+  ++    +  +E   
Sbjct: 25  ERGVAEGNKVFGAALLRKSDLSLVLAETNNETE---NPLWHGEVHTLKRFYEMPEKERPD 81

Query: 71  LPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
             ++    T EPC+MC +AI+ +     YY
Sbjct: 82  TKDMVFLSTHEPCSMCLSAITWSGFDNFYY 111


>gi|168043725|ref|XP_001774334.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162674326|gb|EDQ60836.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 521

 Score = 47.6 bits (113), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 25/112 (22%), Positives = 38/112 (33%), Gaps = 18/112 (16%)

Query: 2   KKGNVFMSCALEEAQN-AALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
                 +  A E A++ A L    P  G V     K +       +  K     AE+LA+
Sbjct: 36  SDDTQHLLRAAELAESSAGLTAPHPNFGCVIAHGPKSVGEGFLYAQGTKS----AEVLAV 91

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAA------AISLARIRRLYYGASNP 105
                +           Y+ LEP   C        A+  A + R+  G S+P
Sbjct: 92  ERAGELAKN-----ATAYLNLEPGD-CHGDASAVRALRQAGVSRVVIGISHP 137


>gi|225629145|ref|ZP_03787178.1| deoxycytidylate deaminase [Brucella ceti str. Cudo]
 gi|225615641|gb|EEH12690.1| deoxycytidylate deaminase [Brucella ceti str. Cudo]
          Length = 201

 Score = 47.6 bits (113), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 16/90 (17%), Positives = 34/90 (37%), Gaps = 8/90 (8%)

Query: 16  QNAALRNEIPVGAVAVLNNK---IISRAGNRNRELKDVTAHAEILAIRMGCRILSQEI-- 70
           +          GA  +  +    +++   N      +   H E+  ++    +  +E   
Sbjct: 27  ERGVAEGNKVFGAALLRKSDLSLVLAETNNETE---NPLWHGEVHTLKRFYEMPEKERPD 83

Query: 71  LPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
             ++    T EPC+MC +AI+ +     YY
Sbjct: 84  TKDMVFLSTHEPCSMCLSAITWSGFDNFYY 113


>gi|325920785|ref|ZP_08182689.1| deoxycytidylate deaminase [Xanthomonas gardneri ATCC 19865]
 gi|325548739|gb|EGD19689.1| deoxycytidylate deaminase [Xanthomonas gardneri ATCC 19865]
          Length = 531

 Score = 47.6 bits (113), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 20/79 (25%), Positives = 29/79 (36%), Gaps = 6/79 (7%)

Query: 53  HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN 112
           HAE+ AI    R      +    ++ T  PC  CA  I  A I+ +Y+     K     +
Sbjct: 373 HAEMDAIVSVAR-QGTAKVAGAIMFTTTYPCHNCARHIVAAGIKIVYFIEPYEK-----S 426

Query: 113 GTQFYTLATCHHSPEIYPG 131
                   +  H P   PG
Sbjct: 427 LASDLHNDSITHDPITEPG 445


>gi|168185921|ref|ZP_02620556.1| cytidine and deoxycytidylate deaminase family protein [Clostridium
           botulinum C str. Eklund]
 gi|169295948|gb|EDS78081.1| cytidine and deoxycytidylate deaminase family protein [Clostridium
           botulinum C str. Eklund]
          Length = 162

 Score = 47.6 bits (113), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 25/107 (23%), Positives = 36/107 (33%), Gaps = 32/107 (29%)

Query: 26  VGAVAVLNNKIISRAGN---------------RNRELK--DVTA-------HAEILAIRM 61
            GA+ V N++IIS   +               R  EL     T        HAE  AI  
Sbjct: 28  FGAIIVKNDEIISSGYSGAPRGRKNCSDLGYCRREELNVARGTRYELCRSVHAEQNAIIS 87

Query: 62  GCR---ILSQEILPEVDLYV-----TLEPCTMCAAAISLARIRRLYY 100
             R   I     L   ++Y         PC++C   I  + I ++  
Sbjct: 88  ARRQEMIDGTLYLVGKEMYNRELVKNAAPCSLCKRIIINSGISKVVI 134


>gi|330795490|ref|XP_003285806.1| hypothetical protein DICPUDRAFT_19901 [Dictyostelium purpureum]
 gi|325084270|gb|EGC37702.1| hypothetical protein DICPUDRAFT_19901 [Dictyostelium purpureum]
          Length = 165

 Score = 47.6 bits (113), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 20/104 (19%), Positives = 40/104 (38%), Gaps = 7/104 (6%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAI 59
           ++    FM   ++ A     RN      + V     ++    +      +    +E+LAI
Sbjct: 3   IEIHESFMKIVIDLA---IERNNK-YATIIVSPEGSVLCSGVDST--KDNPILRSELLAI 56

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
                  S     +  +Y T EP  + A++I  A+ +   +G+S
Sbjct: 57  TNCSASYSMSTFEDHSIYSTSEPDPLAASSIVWAKFKTAVWGSS 100


>gi|297625715|ref|YP_003687478.1| deoxycytidylate deaminase (dCMP deaminase) [Propionibacterium
           freudenreichii subsp. shermanii CIRM-BIA1]
 gi|296921480|emb|CBL56034.1| Deoxycytidylate deaminase (dCMP deaminase) [Propionibacterium
           freudenreichii subsp. shermanii CIRM-BIA1]
          Length = 154

 Score = 47.6 bits (113), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 26/130 (20%), Positives = 40/130 (30%), Gaps = 39/130 (30%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGN-------------------- 42
              F+      A  A       VGAV V  +++II+   N                    
Sbjct: 16  DEYFLGITQAVAARAKCTRRR-VGAVLVGPDHRIIATGYNGAAPGRPDCLEGACPRGRLS 74

Query: 43  -----------RNRELKDVTA-HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAI 90
                      R        A HAE+ A+     + +         ++T EPC  C  A+
Sbjct: 75  YDEIPGLGDYDRPGTPGFCIAIHAEMNAL-----LFATRDTKGATAFITDEPCPGCRKAL 129

Query: 91  SLARIRRLYY 100
           + A I R  +
Sbjct: 130 AAAGIVRAVW 139


>gi|218246093|ref|YP_002371464.1| CMP/dCMP deaminase [Cyanothece sp. PCC 8801]
 gi|218166571|gb|ACK65308.1| CMP/dCMP deaminase zinc-binding [Cyanothece sp. PCC 8801]
          Length = 179

 Score = 47.6 bits (113), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 22/127 (17%), Positives = 37/127 (29%), Gaps = 40/127 (31%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
              F+  A   A  +      PVGAV V + ++++            + H          
Sbjct: 12  DEYFLMIAKLAATRSTCLA-FPVGAVIVKDRQVLATGY---NGSPSGSVHC------TAQ 61

Query: 64  RILSQEIL------------------------------PEVDLYVTLEPCTMCAAAISLA 93
                E+                                   +YVTLEPC  C   +  A
Sbjct: 62  GFCYPELSSCAASSSLPSRAVHAEANAIAQAAKHGISTEGAMIYVTLEPCISCLKLVISA 121

Query: 94  RIRRLYY 100
            I++++Y
Sbjct: 122 GIKQVFY 128


>gi|288574413|ref|ZP_06392770.1| CMP/dCMP deaminase zinc-binding [Dethiosulfovibrio peptidovorans
           DSM 11002]
 gi|288570154|gb|EFC91711.1| CMP/dCMP deaminase zinc-binding [Dethiosulfovibrio peptidovorans
           DSM 11002]
          Length = 161

 Score = 47.6 bits (113), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 28/109 (25%), Positives = 36/109 (33%), Gaps = 39/109 (35%)

Query: 27  GAVAVLNNKIISRAGN---------------RNRELKDVTA---------HAEILAIRMG 62
           GAV V ++ IIS   N                   LK             HAE  AI  G
Sbjct: 32  GAVLVKDHVIISTGYNGACRGEPNCVDVGVCHREALKIPKGERYELCVAVHAEQNAIING 91

Query: 63  CRILSQEILPEVDLYV-----------TLEPCTMCAAAISLARIRRLYY 100
               + E +    +Y+             EPC +C   I  ARI R+ Y
Sbjct: 92  ----NPEKMVGGTIYIAGVNASDGTLANGEPCMLCRRMIKNARIERVVY 136


>gi|254705847|ref|ZP_05167675.1| CMP/dCMP deaminase zinc-binding protein [Brucella pinnipedialis
           M163/99/10]
 gi|261313276|ref|ZP_05952473.1| CMP/dCMP deaminase zinc-binding protein [Brucella pinnipedialis
           M163/99/10]
 gi|261302302|gb|EEY05799.1| CMP/dCMP deaminase zinc-binding protein [Brucella pinnipedialis
           M163/99/10]
          Length = 199

 Score = 47.6 bits (113), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 16/90 (17%), Positives = 34/90 (37%), Gaps = 8/90 (8%)

Query: 16  QNAALRNEIPVGAVAVLNNK---IISRAGNRNRELKDVTAHAEILAIRMGCRILSQEI-- 70
           +          GA  +  +    +++   N      +   H E+  ++    +  +E   
Sbjct: 25  ERGVAEGNKVFGAALLRKSDLSLVLAETNNETE---NPLWHGEVHTLKRFYEMPEKERPD 81

Query: 71  LPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
             ++    T EPC+MC +AI+ +     YY
Sbjct: 82  TKDMVFLSTHEPCSMCLSAITWSGFDNFYY 111


>gi|17988964|ref|NP_541597.1| deoxycytidylate deaminase [Brucella melitensis bv. 1 str. 16M]
 gi|23500404|ref|NP_699844.1| cytidine/deoxycytidylate deaminase family protein [Brucella suis
           1330]
 gi|148558702|ref|YP_001257635.1| cytidine/deoxycytidylate deaminase family protein [Brucella ovis
           ATCC 25840]
 gi|161620716|ref|YP_001594602.1| CMP/dCMP deaminase zinc-binding [Brucella canis ATCC 23365]
 gi|163844794|ref|YP_001622449.1| hypothetical protein BSUIS_B0645 [Brucella suis ATCC 23445]
 gi|225686437|ref|YP_002734409.1| CMP/dCMP deaminase zinc-binding [Brucella melitensis ATCC 23457]
 gi|254699889|ref|ZP_05161717.1| CMP/dCMP deaminase zinc-binding protein [Brucella suis bv. 5 str.
           513]
 gi|254703012|ref|ZP_05164840.1| CMP/dCMP deaminase zinc-binding protein [Brucella suis bv. 3 str.
           686]
 gi|254711076|ref|ZP_05172887.1| CMP/dCMP deaminase zinc-binding protein [Brucella pinnipedialis
           B2/94]
 gi|256015432|ref|YP_003105441.1| cytidine/deoxycytidylate deaminase family protein [Brucella microti
           CCM 4915]
 gi|256029457|ref|ZP_05443071.1| CMP/dCMP deaminase zinc-binding protein [Brucella pinnipedialis
           M292/94/1]
 gi|256043548|ref|ZP_05446475.1| CMP/dCMP deaminase zinc-binding protein [Brucella melitensis bv. 1
           str. Rev.1]
 gi|256059147|ref|ZP_05449356.1| CMP/dCMP deaminase zinc-binding protein [Brucella neotomae 5K33]
 gi|256111422|ref|ZP_05452442.1| CMP/dCMP deaminase zinc-binding protein [Brucella melitensis bv. 3
           str. Ether]
 gi|256157653|ref|ZP_05455571.1| CMP/dCMP deaminase zinc-binding protein [Brucella ceti M490/95/1]
 gi|256253372|ref|ZP_05458908.1| CMP/dCMP deaminase zinc-binding protein [Brucella ceti B1/94]
 gi|256262420|ref|ZP_05464952.1| cytidine/deoxycytidylate deaminase [Brucella melitensis bv. 2 str.
           63/9]
 gi|260167451|ref|ZP_05754262.1| cytidine/deoxycytidylate deaminase family protein [Brucella sp.
           F5/99]
 gi|260564742|ref|ZP_05835227.1| cytidine/deoxycytidylate deaminase [Brucella melitensis bv. 1 str.
           16M]
 gi|260568059|ref|ZP_05838528.1| cytidine/deoxycytidylate deaminase [Brucella suis bv. 4 str. 40]
 gi|261220492|ref|ZP_05934773.1| cytidine/deoxycytidylate deaminase [Brucella ceti B1/94]
 gi|261318667|ref|ZP_05957864.1| CMP/dCMP deaminase zinc-binding protein [Brucella pinnipedialis
           B2/94]
 gi|261323100|ref|ZP_05962297.1| cytidine/deoxycytidylate deaminase [Brucella neotomae 5K33]
 gi|261750364|ref|ZP_05994073.1| CMP/dCMP deaminase zinc-binding protein [Brucella suis bv. 5 str.
           513]
 gi|261753621|ref|ZP_05997330.1| CMP/dCMP deaminase zinc-binding protein [Brucella suis bv. 3 str.
           686]
 gi|261756863|ref|ZP_06000572.1| cytidine/deoxycytidylate deaminase [Brucella sp. F5/99]
 gi|265986467|ref|ZP_06099024.1| cytidine/deoxycytidylate deaminase [Brucella pinnipedialis
           M292/94/1]
 gi|265989964|ref|ZP_06102521.1| cytidine/deoxycytidylate deaminase [Brucella melitensis bv. 1 str.
           Rev.1]
 gi|265992926|ref|ZP_06105483.1| cytidine/deoxycytidylate deaminase [Brucella melitensis bv. 3 str.
           Ether]
 gi|265996159|ref|ZP_06108716.1| cytidine/deoxycytidylate deaminase [Brucella ceti M490/95/1]
 gi|294853551|ref|ZP_06794223.1| dCMP deaminase [Brucella sp. NVSL 07-0026]
 gi|306840740|ref|ZP_07473488.1| CMP/dCMP deaminase zinc-binding protein [Brucella sp. BO2]
 gi|17984798|gb|AAL53861.1| deoxycytidylate deaminase [Brucella melitensis bv. 1 str. 16M]
 gi|23464025|gb|AAN33849.1| cytidine/deoxycytidylate deaminase family protein [Brucella suis
           1330]
 gi|148369987|gb|ABQ62859.1| cytidine/deoxycytidylate deaminase family protein [Brucella ovis
           ATCC 25840]
 gi|161337527|gb|ABX63831.1| CMP/dCMP deaminase zinc-binding [Brucella canis ATCC 23365]
 gi|163675517|gb|ABY39627.1| Hypothetical protein, conserved [Brucella suis ATCC 23445]
 gi|225642542|gb|ACO02455.1| CMP/dCMP deaminase zinc-binding [Brucella melitensis ATCC 23457]
 gi|255998092|gb|ACU49779.1| cytidine/deoxycytidylate deaminase family protein [Brucella microti
           CCM 4915]
 gi|260152385|gb|EEW87478.1| cytidine/deoxycytidylate deaminase [Brucella melitensis bv. 1 str.
           16M]
 gi|260154724|gb|EEW89805.1| cytidine/deoxycytidylate deaminase [Brucella suis bv. 4 str. 40]
 gi|260919076|gb|EEX85729.1| cytidine/deoxycytidylate deaminase [Brucella ceti B1/94]
 gi|261297890|gb|EEY01387.1| CMP/dCMP deaminase zinc-binding protein [Brucella pinnipedialis
           B2/94]
 gi|261299080|gb|EEY02577.1| cytidine/deoxycytidylate deaminase [Brucella neotomae 5K33]
 gi|261736847|gb|EEY24843.1| cytidine/deoxycytidylate deaminase [Brucella sp. F5/99]
 gi|261740117|gb|EEY28043.1| CMP/dCMP deaminase zinc-binding protein [Brucella suis bv. 5 str.
           513]
 gi|261743374|gb|EEY31300.1| CMP/dCMP deaminase zinc-binding protein [Brucella suis bv. 3 str.
           686]
 gi|262550456|gb|EEZ06617.1| cytidine/deoxycytidylate deaminase [Brucella ceti M490/95/1]
 gi|262763796|gb|EEZ09828.1| cytidine/deoxycytidylate deaminase [Brucella melitensis bv. 3 str.
           Ether]
 gi|263000633|gb|EEZ13323.1| cytidine/deoxycytidylate deaminase [Brucella melitensis bv. 1 str.
           Rev.1]
 gi|263092156|gb|EEZ16453.1| cytidine/deoxycytidylate deaminase [Brucella melitensis bv. 2 str.
           63/9]
 gi|264658664|gb|EEZ28925.1| cytidine/deoxycytidylate deaminase [Brucella pinnipedialis
           M292/94/1]
 gi|294819206|gb|EFG36206.1| dCMP deaminase [Brucella sp. NVSL 07-0026]
 gi|306289246|gb|EFM60493.1| CMP/dCMP deaminase zinc-binding protein [Brucella sp. BO2]
 gi|326410817|gb|ADZ67881.1| CMP/dCMP deaminase zinc-binding protein [Brucella melitensis M28]
 gi|326554108|gb|ADZ88747.1| CMP/dCMP deaminase zinc-binding protein [Brucella melitensis M5-90]
          Length = 199

 Score = 47.2 bits (112), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 16/90 (17%), Positives = 34/90 (37%), Gaps = 8/90 (8%)

Query: 16  QNAALRNEIPVGAVAVLNNK---IISRAGNRNRELKDVTAHAEILAIRMGCRILSQEI-- 70
           +          GA  +  +    +++   N      +   H E+  ++    +  +E   
Sbjct: 25  ERGVAEGNKVFGAALLRKSDLSLVLAETNNETE---NPLWHGEVHTLKRFYEMPEKERPD 81

Query: 71  LPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
             ++    T EPC+MC +AI+ +     YY
Sbjct: 82  TKDMVFLSTHEPCSMCLSAITWSGFDNFYY 111


>gi|167525958|ref|XP_001747313.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163774148|gb|EDQ87780.1| predicted protein [Monosiga brevicollis MX1]
          Length = 222

 Score = 47.2 bits (112), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 33/177 (18%), Positives = 51/177 (28%), Gaps = 48/177 (27%)

Query: 4   GNVFMSCALEEAQNAALRNEIP---VGAVAV-LNNKIISRAGNRNRELKD---------- 49
            + FM+ A   A+ +      P   +G+  V   NKI+    N      D          
Sbjct: 29  DDYFMAVAFLSAKRSKD----PNTQIGSCIVNAANKIVGIGYNGMPRGCDDDALPWAREG 84

Query: 50  VTAH---------AEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
            +           AE+ AI       +   L    +Y    P +  A  I  A I  + Y
Sbjct: 85  PSVLDTKYPYVCNAEMNAILN----KNSASLRGCRMYTAFFPNSESAKLIIQAGITEVLY 140

Query: 101 ----GASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF----FKERR 149
                A  P+            +    H+P            +I  DF    F+  R
Sbjct: 141 TVDRYAERPEYQAARRLFALAKVHCRQHTPL---------CSEITLDFDAVEFQASR 188


>gi|301165871|emb|CBW25444.1| putative deaminase [Bacteriovorax marinus SJ]
          Length = 158

 Score = 47.2 bits (112), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 25/96 (26%), Positives = 35/96 (36%), Gaps = 26/96 (27%)

Query: 26  VGAVAV-LNNKIISRAGNRNRELKDVTA--------------------HAEILAIRMGCR 64
           VGAV V  NN  ++   N      D T                     HAE  AI     
Sbjct: 18  VGAVFVDKNNHQVTMGYNGFVAGIDETKLPWGKDPKAPLEYQKYGYVVHAEANAILHA-- 75

Query: 65  ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
              ++ L     YVTL PC  CA  ++ +++  + Y
Sbjct: 76  ---KDSLEGTRAYVTLFPCHECAKLLASSKVCEVVY 108


>gi|319780122|ref|YP_004139598.1| CMP/dCMP deaminase zinc-binding protein [Mesorhizobium ciceri
           biovar biserrulae WSM1271]
 gi|317166010|gb|ADV09548.1| CMP/dCMP deaminase zinc-binding protein [Mesorhizobium ciceri
           biovar biserrulae WSM1271]
          Length = 197

 Score = 47.2 bits (112), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 15/80 (18%), Positives = 31/80 (38%), Gaps = 8/80 (10%)

Query: 26  VGAVAVLNNK---IISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILP--EVDLYVTL 80
            GA  +  +    +++   N      +   H E+  ++    +   E +   +     T 
Sbjct: 33  FGAAILRKDDRSLVLAETNNEME---NPLWHGEVHCLKRFYEMPRAERVDTKDAIFIATH 89

Query: 81  EPCTMCAAAISLARIRRLYY 100
           EPC++C +AI+       YY
Sbjct: 90  EPCSLCLSAITWTGFDNFYY 109


>gi|310794835|gb|EFQ30296.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Glomerella graminicola M1.001]
          Length = 178

 Score = 47.2 bits (112), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 31/125 (24%), Positives = 43/125 (34%), Gaps = 28/125 (22%)

Query: 3   KGNVFMSCALEEAQNAALRNEIP----VGAVAV--LNNKIISRAGNRNRELKDVTAHAEI 56
             + ++  AL  A+ +  +   P    VGA  V   NN I+S              HAE 
Sbjct: 17  DHSAYLQYALSLAERSPPK---PTNYRVGAALVNPANNSIVSTGYTLELPGN---THAEQ 70

Query: 57  LAIRMGCRILS--QEILPE-----VDLYVTLEPC-------TMCAAAISLAR--IRRLYY 100
                        +E L       + LY T+EPC         CA  I   R  I+ +Y 
Sbjct: 71  CCFIKLAEKYGVAEEELNSVVKTPLVLYTTMEPCSTRLSGNMPCAKRILQLRPLIKAVYV 130

Query: 101 GASNP 105
           G   P
Sbjct: 131 GVQEP 135


>gi|302343811|ref|YP_003808340.1| CMP/dCMP deaminase zinc-binding protein [Desulfarculus baarsii DSM
           2075]
 gi|301640424|gb|ADK85746.1| CMP/dCMP deaminase zinc-binding protein [Desulfarculus baarsii DSM
           2075]
          Length = 167

 Score = 47.2 bits (112), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 25/133 (18%), Positives = 43/133 (32%), Gaps = 41/133 (30%)

Query: 3   KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAG--------N-------RNREL 47
           K   +++ A E A+          GAV V +++I+S           N          E+
Sbjct: 7   KDEYYLNIAREVARRGTCLR-RQYGAVIVKDDQIVSTGYAGAPRGVANCVDLGRCLREEM 65

Query: 48  KDVTA---------HAEILAIRMGCRILSQEILPEVDLYVTL------------EPCTMC 86
              +          HAE+ A+    R  +     +  LY+              +PC +C
Sbjct: 66  AVPSGQRYELCRSVHAEMNAVIHASRAQT----MDATLYLAGIEVATGLATANPQPCLLC 121

Query: 87  AAAISLARIRRLY 99
              I  A I  + 
Sbjct: 122 RRVIINAGIAAVV 134


>gi|213622248|ref|ZP_03375031.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
          deaminase/5-amino-6-(5-phosphoribosylamino)uracil
          reductase [Salmonella enterica subsp. enterica serovar
          Typhi str. E98-2068]
          Length = 47

 Score = 47.2 bits (112), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 12/44 (27%), Positives = 19/44 (43%), Gaps = 2/44 (4%)

Query: 3  KGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRN 44
          +   +M+ AL+ AQ      +  P VG V V N  I+    +  
Sbjct: 2  QDEFYMARALKLAQRGRFTTHPNPNVGCVIVNNGDIVGEGYHHR 45


>gi|299116484|emb|CBN76201.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 201

 Score = 47.2 bits (112), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 17/88 (19%), Positives = 36/88 (40%), Gaps = 6/88 (6%)

Query: 17  NAALRNEIPVGAVAVL--NNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL--SQEILP 72
            A  +     GA  +   +  ++    N   E      H E+  I+    +    + +  
Sbjct: 29  EAVKKGNKVFGAAILKLSDLSLVVAGTNTEIEC--PLWHGEVACIKNFWNLPEEGRPLPS 86

Query: 73  EVDLYVTLEPCTMCAAAISLARIRRLYY 100
           E  +  T EPC+MC +AI+ +  + +++
Sbjct: 87  ECLMLATHEPCSMCVSAITWSAFKEIHF 114


>gi|297585163|ref|YP_003700943.1| CMP/dCMP deaminase zinc-binding protein [Bacillus selenitireducens
           MLS10]
 gi|297143620|gb|ADI00378.1| CMP/dCMP deaminase zinc-binding protein [Bacillus selenitireducens
           MLS10]
          Length = 175

 Score = 46.8 bits (111), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 33/136 (24%), Positives = 40/136 (29%), Gaps = 39/136 (28%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAV-----LNNKIISRAGN---------------RN 44
             FMS A   A   +      VGAV V         I+S   N               R 
Sbjct: 24  QYFMSKAY-IASLRSTCGSRRVGAVIVNSLDKDKRNILSTGYNGYPSGQPHCVDGGCPRF 82

Query: 45  RELKDVTA--------------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAI 90
              K                  HAE  A+    R           L+ T  PC  CA  I
Sbjct: 83  EAKKQGLIQSGEYQDEYPCDAFHAEANAMFQMQRRGIST--EGCVLFSTTFPCRQCAEKI 140

Query: 91  SLARIRRLYY--GASN 104
           + A IR +YY  G  +
Sbjct: 141 NGAGIRSVYYSEGYPD 156


>gi|149511776|ref|XP_001520371.1| PREDICTED: hypothetical protein, partial [Ornithorhynchus anatinus]
          Length = 186

 Score = 46.8 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 15/48 (31%), Positives = 22/48 (45%), Gaps = 4/48 (8%)

Query: 53  HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
           HAE+ AI       +   +    +YV L PC  CA  I  A I+ + +
Sbjct: 92  HAELNAIMN----KNSTDVKGCSIYVALFPCNECAKLIIQAGIKDVIF 135


>gi|71004478|ref|XP_756905.1| hypothetical protein UM00758.1 [Ustilago maydis 521]
 gi|46095897|gb|EAK81130.1| hypothetical protein UM00758.1 [Ustilago maydis 521]
          Length = 704

 Score = 46.8 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 18/118 (15%), Positives = 33/118 (27%), Gaps = 31/118 (26%)

Query: 43  RNRELKDVTAHAEILAIRMGCRILSQEI-LPEVDLYVTL--------------EPCTMCA 87
           +    ++   H  I AI     + + +  LP  D                   EPC  C 
Sbjct: 552 QRILRRNPLKHGVIEAIARVSVLRTLDRVLPSTDTSTNGSDYLLTSLSLFSLYEPCVYCT 611

Query: 88  AAISLARIRRLYYGASNPKGGGI----------------ENGTQFYTLATCHHSPEIY 129
            A+  +R+  +Y+   +P  G                              +HS  ++
Sbjct: 612 MALVHSRVSEVYFLLPSPGRGACSGAHLPDAAKCDAGHNGGIYALQEQKGLNHSFAVW 669


>gi|58531995|emb|CAE04095.3| OSJNBa0096F01.4 [Oryza sativa Japonica Group]
          Length = 633

 Score = 46.8 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 17/95 (17%), Positives = 34/95 (35%), Gaps = 18/95 (18%)

Query: 58  AIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIE 111
           A+R       +++      YV+LEPC        C  A+  A+++ +  G ++P      
Sbjct: 49  ALRDA-----RDLAENATAYVSLEPCNHYGRTPPCTEALINAKLKDVVVGMTDPNPIVAS 103

Query: 112 NGTQFYTLATCHHSPEIYPGISEQR--SRQIIQDF 144
            G +    A             E+    R + + +
Sbjct: 104 KGIERLQSAGIDVRV-----CMEEEALCRNLNEAY 133


>gi|319761202|ref|YP_004125139.1| cmp/dcmp deaminase zinc-binding protein [Alicycliphilus
           denitrificans BC]
 gi|317115763|gb|ADU98251.1| CMP/dCMP deaminase zinc-binding protein [Alicycliphilus
           denitrificans BC]
          Length = 557

 Score = 46.8 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 1/48 (2%)

Query: 53  HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
           HAE+ AI    R+    ++    ++VT  PC  CA  +  A I  +YY
Sbjct: 401 HAEMHAILGASRVAGDRVIAG-KVFVTTYPCHSCARHLVAAGISEIYY 447


>gi|118576366|ref|YP_876109.1| deoxycytidylate deaminase [Cenarchaeum symbiosum A]
 gi|118194887|gb|ABK77805.1| deoxycytidylate deaminase [Cenarchaeum symbiosum A]
          Length = 150

 Score = 46.8 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 22/101 (21%), Positives = 30/101 (29%), Gaps = 27/101 (26%)

Query: 26  VGAVAVLNNKIISRAGN-------------------------RNRELKDVT--AHAEILA 58
           VGAV V +++ ++   N                         R+ E  D     HAE  A
Sbjct: 5   VGAVIVRDHRQLATGYNGTPPGVKNCFEGGCERCIERMEGKIRSGEGLDRCLCNHAEANA 64

Query: 59  IRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLY 99
           I     +          +Y T  PC  C        IRR  
Sbjct: 65  IMHCAILGIGAGGGNATMYTTFSPCLECTKMAVTIGIRRFV 105


>gi|323144479|ref|ZP_08079081.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Succinatimonas hippei YIT 12066]
 gi|322415757|gb|EFY06489.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Succinatimonas hippei YIT 12066]
          Length = 170

 Score = 46.8 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 31/161 (19%), Positives = 45/161 (27%), Gaps = 37/161 (22%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGN-------RNRELKDVTA- 52
            K   FM  A   +  +        GAV V  + +I++   N          +LK     
Sbjct: 9   SKDESFMEIAQAVSMRSTCIRRR-YGAVIVSKDGRIVATGYNGAPRHRANCSDLKSCLRA 67

Query: 53  ----------------HAEILAIRMGCRIL---SQEILPEVDLYVT-----LEPCTMCAA 88
                           HAE  AI  G  +        L   D         + PC MC  
Sbjct: 68  ELKIKPGTHYELCRAVHAEANAIINGNPLDIVGGTLYLAGTDAATNKPTAQMRPCAMCER 127

Query: 89  AISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIY 129
            I  A+I R+     +   G + +              EI 
Sbjct: 128 LILNAQITRVV--LRDEN-GNLISVNPLDWDDDIVKRYEIE 165


>gi|194221887|ref|XP_001490247.2| PREDICTED: cytidine and dCMP deaminase domain containing 1 [Equus
           caballus]
          Length = 514

 Score = 46.8 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 21/77 (27%), Positives = 34/77 (44%), Gaps = 11/77 (14%)

Query: 29  VAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAA 88
           V V N KI+      + +L     HA  +A+     +     L   DLY + +PC+ C  
Sbjct: 91  VVVKNTKIVGL-HCSSEDL-----HAGKIAL-----VKHGSRLKNCDLYFSRKPCSACLK 139

Query: 89  AISLARIRRLYYGASNP 105
            I  A + R+ Y  ++P
Sbjct: 140 MIVNAGVNRISYWPADP 156


>gi|321263693|ref|XP_003196564.1| hypothetical protein CGB_K0590C [Cryptococcus gattii WM276]
 gi|317463041|gb|ADV24777.1| Conserved hypothetical protein [Cryptococcus gattii WM276]
          Length = 210

 Score = 46.8 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 18/79 (22%), Positives = 32/79 (40%), Gaps = 6/79 (7%)

Query: 26  VGAVAVLNNK--IISRAGNRNRELKDVTAHAEILAIRM--GCRILSQEILPEVDLYVTLE 81
            GA  +  +   +I  A N   E+     H EI  I+         + +  E   + T E
Sbjct: 35  FGAAILRKSDLSVIVVATN--NEISSPLLHGEINCIQHFYALPSGQRPLPSECLFFATHE 92

Query: 82  PCTMCAAAISLARIRRLYY 100
           PC++C + I+ +     Y+
Sbjct: 93  PCSLCLSGITWSGFDNHYF 111


>gi|255513757|gb|EET90022.1| CMP/dCMP deaminase zinc-binding [Candidatus Micrarchaeum
           acidiphilum ARMAN-2]
          Length = 188

 Score = 46.8 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 33/141 (23%), Positives = 50/141 (35%), Gaps = 42/141 (29%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGN-----------------RNREL 47
             F+   +  A+ +   NE   GAV V   K++    N                 RN EL
Sbjct: 16  EKFIPECVSLARKS-DCNESNYGAVIVYEGKVVGSGYNHIPEVLAGEYTCKACPRRNVEL 74

Query: 48  K-------DVTAHAEILAIRM--GCRILSQEILPEVDLYV-----TLE---------P-C 83
                    VT HAE  AI+        ++E+L +  + V       E         P C
Sbjct: 75  HGGVGFELCVTIHAEEAAIQDFYARNGFNKELLSKSTMIVERLNKNGELSVFNSEFVPYC 134

Query: 84  TMCAAAISLARIRRLYYGASN 104
           T CA  +  A ++ + Y  S+
Sbjct: 135 TKCAGEVYKAGLKEVIYHRSD 155


>gi|301767474|ref|XP_002919164.1| PREDICTED: cytidine and dCMP deaminase domain-containing protein
           1-like [Ailuropoda melanoleuca]
          Length = 514

 Score = 46.8 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 22/77 (28%), Positives = 34/77 (44%), Gaps = 11/77 (14%)

Query: 29  VAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAA 88
           V V N KI+      + +L     HA  +A+     I     L   DLY + +PC+ C  
Sbjct: 92  VVVKNTKIVGL-HCSSEDL-----HAGKIAL-----IKHGSRLKNCDLYFSRKPCSACLK 140

Query: 89  AISLARIRRLYYGASNP 105
            I  A + R+ Y  ++P
Sbjct: 141 MIVNAGVNRISYWPADP 157


>gi|159184765|ref|NP_354460.2| hypothetical protein Atu1453 [Agrobacterium tumefaciens str. C58]
 gi|159140053|gb|AAK87245.2| conserved hypothetical protein [Agrobacterium tumefaciens str. C58]
          Length = 195

 Score = 46.4 bits (110), Expect = 0.001,   Method: Composition-based stats.
 Identities = 18/77 (23%), Positives = 34/77 (44%), Gaps = 6/77 (7%)

Query: 26  VGAVAVLNNK---IISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEP 82
            GA  +  +    +++     N EL++   H E+  ++    +  +    ++    T EP
Sbjct: 33  FGAAILRKSDLSLVVAE---TNNELENPLWHGEVHTLKRFYELGEKPNTKDLIFLSTHEP 89

Query: 83  CTMCAAAISLARIRRLY 99
           CTMC +AI+ A     Y
Sbjct: 90  CTMCMSAITWAGFDNFY 106


>gi|149919264|ref|ZP_01907747.1| deoxycytidylate deaminase-related protein [Plesiocystis pacifica
           SIR-1]
 gi|149819978|gb|EDM79400.1| deoxycytidylate deaminase-related protein [Plesiocystis pacifica
           SIR-1]
          Length = 285

 Score = 46.4 bits (110), Expect = 0.001,   Method: Composition-based stats.
 Identities = 20/79 (25%), Positives = 28/79 (35%), Gaps = 1/79 (1%)

Query: 53  HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN 112
           HAE+ A+    R     + PE  LY T  PC  CA  I  + +  + Y     K   +E 
Sbjct: 124 HAEMDALLALARA-GTPVPPEGTLYCTTYPCHSCARHIVASGLTEVIYIEPYAKSLALEL 182

Query: 113 GTQFYTLATCHHSPEIYPG 131
                   T      +  G
Sbjct: 183 HDDAIREQTVSGQKGVESG 201


>gi|281349734|gb|EFB25318.1| hypothetical protein PANDA_007749 [Ailuropoda melanoleuca]
          Length = 471

 Score = 46.4 bits (110), Expect = 0.001,   Method: Composition-based stats.
 Identities = 22/77 (28%), Positives = 34/77 (44%), Gaps = 11/77 (14%)

Query: 29  VAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAA 88
           V V N KI+      + +L     HA  +A+     I     L   DLY + +PC+ C  
Sbjct: 92  VVVKNTKIVGL-HCSSEDL-----HAGKIAL-----IKHGSRLKNCDLYFSRKPCSACLK 140

Query: 89  AISLARIRRLYYGASNP 105
            I  A + R+ Y  ++P
Sbjct: 141 MIVNAGVNRISYWPADP 157


>gi|295663054|ref|XP_002792080.1| predicted protein [Paracoccidioides brasiliensis Pb01]
 gi|226279255|gb|EEH34821.1| predicted protein [Paracoccidioides brasiliensis Pb01]
          Length = 440

 Score = 46.4 bits (110), Expect = 0.001,   Method: Composition-based stats.
 Identities = 30/175 (17%), Positives = 45/175 (25%), Gaps = 81/175 (46%)

Query: 6   VFMSCALEEAQNAALRNEIP-----VGAVAV---LNNKI---ISRAGNRNRELKDVTAHA 54
            +M  A      A      P      G V V      ++   I    N N +  + T+H 
Sbjct: 195 YWMRRA----NQALSDLGSPCPFAAFGTVIVNHTKQGELGDLICIGVNENSKTGNPTSHG 250

Query: 55  -----------------------------------------------------EILAIRM 61
                                                                EI AI  
Sbjct: 251 KLPFLFSNTCIDPEPAFGIPSAPLEQTRAMQIFISICLFLGSTLIQLPFQRTGEIAAITN 310

Query: 62  GCRILSQEI-------------LPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
             ++L+ +                E+ LY   E C+MC +AI  A  +   YG+S
Sbjct: 311 CTKVLTHKSGRFKMTPSQALNAFKELTLYTNAESCSMCTSAIRWAGFKEYVYGSS 365


>gi|213616341|ref|ZP_03372167.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Salmonella enterica subsp. enterica serovar
           Typhi str. E98-2068]
          Length = 127

 Score = 46.4 bits (110), Expect = 0.001,   Method: Composition-based stats.
 Identities = 25/120 (20%), Positives = 38/120 (31%), Gaps = 19/120 (15%)

Query: 36  IISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAA 89
           I+    +          HAE+ A+RM               YVTLEPC        C  A
Sbjct: 2   IVGEGYHHRAGE----PHAEVHALRMAGAKAKGAT-----AYVTLEPCSHHGRTPPCCDA 52

Query: 90  ISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
           +  A + R+     +P       G      A       +  G+    +  + + F K  R
Sbjct: 53  LIAAGVARVVAAMQDPNPQVAGRGLYRLQQAG----IAVSHGLMMSEAEALNKGFLKRMR 108


>gi|218189111|gb|EEC71538.1| hypothetical protein OsI_03859 [Oryza sativa Indica Group]
          Length = 272

 Score = 46.4 bits (110), Expect = 0.001,   Method: Composition-based stats.
 Identities = 25/145 (17%), Positives = 41/145 (28%), Gaps = 49/145 (33%)

Query: 1   MKKGNVFMSCALEEAQNAALRNE---------------------IPVG---AVAVLNNKI 36
           +   + FM+ A   A+ +   N                      +P+G    +      I
Sbjct: 74  ISWDDYFMAIAFLSAKRSKDPNRQTIRHDFLSTFCQPYIPEWQILPLGLEPCLVSQEGII 133

Query: 37  ISRAGN--------------RNRELKDVT-------AHAEILAIRMGCRILSQEILPEVD 75
           +    N              +     D          HAE+ AI       +        
Sbjct: 134 LGIGYNGFPRGCSDNKLPWAKKSAKGDPLETKYPYVVHAEVNAILNTNHASA----AGQK 189

Query: 76  LYVTLEPCTMCAAAISLARIRRLYY 100
           LYVT+ PC  CA  I  + +  + Y
Sbjct: 190 LYVTMFPCNECAKIIIQSGVSEVIY 214


>gi|28867284|ref|NP_789903.1| cytidine/deoxycytidylate deaminase family protein [Pseudomonas
           syringae pv. tomato str. DC3000]
 gi|28850518|gb|AAO53598.1| cytidine/deoxycytidylate deaminase family protein [Pseudomonas
           syringae pv. tomato str. DC3000]
          Length = 520

 Score = 46.4 bits (110), Expect = 0.001,   Method: Composition-based stats.
 Identities = 16/48 (33%), Positives = 23/48 (47%), Gaps = 1/48 (2%)

Query: 53  HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
           HAE+ A+         +I     L+VT  PC  CA  I  A +R +Y+
Sbjct: 384 HAEMHALLSAGSTDGGKIRDG-KLFVTTYPCHSCARHIVAAGVREVYF 430


>gi|224373556|ref|YP_002607928.1| riboflavin biosynthesis protein RibD [Nautilia profundicola AmH]
 gi|223589572|gb|ACM93308.1| riboflavin biosynthesis protein RibD [Nautilia profundicola AmH]
          Length = 325

 Score = 46.4 bits (110), Expect = 0.001,   Method: Composition-based stats.
 Identities = 31/137 (22%), Positives = 45/137 (32%), Gaps = 41/137 (29%)

Query: 26  VGA-VAVLNNKIISRAGNRNRELKDVTAHAEILA-------------------IRMGCRI 65
           VGA V V N   I    ++         HAE+ A                   I    + 
Sbjct: 30  VGAAVIVKNQ--IFTGVHKKAGE----PHAEVHALWEAYRAFHDAPELYTSKEIHEYLKK 83

Query: 66  LSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNP---KGGGIE----N 112
                  + ++YVTLEPC        CA  +   + + +  G  +P    GGG+E    +
Sbjct: 84  HHNGFFNDANVYVTLEPCAHEGKTPSCAYLLKELKPKSVSIGWPDPIKGHGGGVEILKNS 143

Query: 113 GTQ--FYTLATCHHSPE 127
           G          C H  E
Sbjct: 144 GIDVKILNDKRCFHLIE 160


>gi|71000341|ref|XP_754865.1| DRAP deaminase [Aspergillus fumigatus Af293]
 gi|66852502|gb|EAL92827.1| DRAP deaminase, putative [Aspergillus fumigatus Af293]
 gi|159127878|gb|EDP52993.1| DRAP deaminase, putative [Aspergillus fumigatus A1163]
          Length = 193

 Score = 46.4 bits (110), Expect = 0.001,   Method: Composition-based stats.
 Identities = 31/131 (23%), Positives = 47/131 (35%), Gaps = 29/131 (22%)

Query: 3   KGNVFMSCALEEAQNAALRNEIP----VGAVAV--LNNKIISRAGNRNR---ELKDV-TA 52
               +M  ALE+A+ +      P    VGAV V    N+I+S   +         D    
Sbjct: 14  DHKAYMEYALEKARLSPPA---PTKFCVGAVLVDADKNEILSTGYSMELPGDRPGDPGNT 70

Query: 53  HAEILA-IRMGCRILSQEILPE------VDLYVTLEPCT-------MCAAAISLAR--IR 96
           HAE    I++  +    E            LY T+EPC         C   I   +  ++
Sbjct: 71  HAEQCCFIKVAEKHNIPEDRLGEVLPKNTVLYTTMEPCNERLSGNRTCVDRILSLKGAVK 130

Query: 97  RLYYGASNPKG 107
            +Y G   P+ 
Sbjct: 131 VVYVGIKEPET 141


>gi|160898853|ref|YP_001564435.1| CMP/dCMP deaminase [Delftia acidovorans SPH-1]
 gi|160364437|gb|ABX36050.1| CMP/dCMP deaminase zinc-binding [Delftia acidovorans SPH-1]
          Length = 144

 Score = 46.4 bits (110), Expect = 0.001,   Method: Composition-based stats.
 Identities = 27/91 (29%), Positives = 38/91 (41%), Gaps = 23/91 (25%)

Query: 26  VGAVAVLNNK-IISRAGN----------RNRELKDV----TAHAEILAIRMGCRILSQEI 70
           VGAVAV N K  ++   N             + +D+    T HAE  A+     ++    
Sbjct: 28  VGAVAVGNTKNQVAFGYNGLPPGIADTDERLQNRDLKLSLTLHAEENALANASFVVR--- 84

Query: 71  LPEVDLYVTLEPCTMCAAAISLAR-IRRLYY 100
                +YVT  PC  CA  I   R +RR+ Y
Sbjct: 85  ----TVYVTHHPCAGCALRILAKRSVRRVVY 111


>gi|13474276|ref|NP_105844.1| hypothetical protein mll5129 [Mesorhizobium loti MAFF303099]
 gi|14025028|dbj|BAB51630.1| mll5129 [Mesorhizobium loti MAFF303099]
          Length = 197

 Score = 46.4 bits (110), Expect = 0.001,   Method: Composition-based stats.
 Identities = 15/89 (16%), Positives = 33/89 (37%), Gaps = 8/89 (8%)

Query: 17  NAALRNEIPVGAVAV-LNNK--IISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILP- 72
                     GA  +  +++  +++   N      +   H E+  ++    +   E +  
Sbjct: 24  EGVAHGNKLFGAAILGKDDRSLVLAETNNEIE---NPLWHGEVHCLKRFYEMPRAERVDT 80

Query: 73  -EVDLYVTLEPCTMCAAAISLARIRRLYY 100
            +     T EPC++C +AI+       YY
Sbjct: 81  KDALFIATHEPCSLCLSAITWTGFDNFYY 109


>gi|73988990|ref|XP_534116.2| PREDICTED: similar to cytidine and dCMP deaminase domain containing
           1 isoform 1 [Canis familiaris]
          Length = 515

 Score = 46.1 bits (109), Expect = 0.001,   Method: Composition-based stats.
 Identities = 22/77 (28%), Positives = 34/77 (44%), Gaps = 11/77 (14%)

Query: 29  VAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAA 88
           V V N KI+      + +L     HA  +A+     I     L   DLY + +PC+ C  
Sbjct: 92  VVVKNTKIVGL-HCSSEDL-----HAGKIAL-----IKHGARLKNCDLYFSRKPCSACLK 140

Query: 89  AISLARIRRLYYGASNP 105
            I  A + R+ Y  ++P
Sbjct: 141 MIVNAGVNRISYWPADP 157


>gi|145637247|ref|ZP_01792908.1| riboflavin biosynthesis protein RibD [Haemophilus influenzae
          PittHH]
 gi|145269499|gb|EDK09441.1| riboflavin biosynthesis protein RibD [Haemophilus influenzae
          PittHH]
          Length = 60

 Score = 46.1 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 14/42 (33%), Positives = 19/42 (45%), Gaps = 2/42 (4%)

Query: 2  KKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAG 41
           +  VFM  AL+ A          P VG V V N +I+ +A 
Sbjct: 6  SQDCVFMQRALDLAAKGQYTTTPNPSVGCVLVKNGEIVGKAF 47


>gi|291165047|gb|ADD81075.1| gp077 [Rhodococcus phage ReqiPoco6]
          Length = 195

 Score = 46.1 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 28/126 (22%), Positives = 44/126 (34%), Gaps = 34/126 (26%)

Query: 4   GNVFMSCALEEAQNA---ALRNEIPVGAVAVLNNK-IISRAGN----------RNRELKD 49
               M  A+  A+ A     +    VGAV +  ++ IIS   N          +    + 
Sbjct: 9   DEYGMKLAVHAAERADCTRRQ----VGAVLMAADRSIISSGYNGGPSKGKSCLKGECPRG 64

Query: 50  VTAHAEI-------------LAIRMGCRIL---SQEILPEVDLYVTLEPCTMCAAAISLA 93
              HAE+             +A+     +L   +        LY+T EPC +C   IS  
Sbjct: 65  RLTHAELPADSAYDTGGGTCVALHAEWNVLLRTAWHQFEGSTLYITEEPCHICKVMISGT 124

Query: 94  RIRRLY 99
            I R+ 
Sbjct: 125 AIHRVV 130


>gi|193083802|gb|ACF09485.1| dCMP deaminase [uncultured marine crenarchaeote KM3-47-D6]
          Length = 156

 Score = 46.1 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/101 (20%), Positives = 33/101 (32%), Gaps = 27/101 (26%)

Query: 26  VGAVAVLNNKIISRAGN---------------RNRELKDV------------TAHAEILA 58
           VGAV V +++ I+   N               R ++  D              +HAE  A
Sbjct: 18  VGAVIVRDHRQIATGYNGTPPGIKNCFEGGCKRCQDRMDGKIESGASLDRCLCSHAEANA 77

Query: 59  IRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLY 99
           I     +       +  LY T  PC  C        I+++ 
Sbjct: 78  IMHCAILGIGTGTKDAILYTTFIPCLECTKMAITIGIKKII 118


>gi|169836055|ref|ZP_02869243.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [candidate
           division TM7 single-cell isolate TM7a]
          Length = 277

 Score = 46.1 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 13/56 (23%), Positives = 21/56 (37%), Gaps = 4/56 (7%)

Query: 91  SLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFK 146
               ++R   G+S+P       G Q    A      E+   + +    +I Q FFK
Sbjct: 1   MKMGLKRCVIGSSDPNPKVAGKGVQILRNAG----IEVRENVLKSECDKINQVFFK 52


>gi|226294624|gb|EEH50044.1| predicted protein [Paracoccidioides brasiliensis Pb18]
          Length = 264

 Score = 46.1 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 30/149 (20%), Positives = 44/149 (29%), Gaps = 59/149 (39%)

Query: 6   VFMSCALEEAQNAALRNEIP-----VGAVAV---LNNKI-----ISR-------AGNRNR 45
            +M  A      A      P      G V V      ++     I R         N++ 
Sbjct: 49  YWMRRA----NQALSDLGSPCPFAAFGTVIVNHTKQGELGDLICIGRLGFCPPSGANKS- 103

Query: 46  ELKDVTAH------------------AEILAIRMGCRILSQEI-------------LPEV 74
              D   H                   EI AI    ++L+ +                E+
Sbjct: 104 ---DADFHIHLSVLGSTLIQLPFQRTGEIAAITNCTKVLTDKSGRFKMTPSQTLNAFKEL 160

Query: 75  DLYVTLEPCTMCAAAISLARIRRLYYGAS 103
            LY   E C+MC +AI  A  +   YG+S
Sbjct: 161 TLYSNAESCSMCTSAIRWAGFKEYVYGSS 189


>gi|254445230|ref|ZP_05058706.1| Cytidine and deoxycytidylate deaminase zinc-binding region domain
           protein [Verrucomicrobiae bacterium DG1235]
 gi|198259538|gb|EDY83846.1| Cytidine and deoxycytidylate deaminase zinc-binding region domain
           protein [Verrucomicrobiae bacterium DG1235]
          Length = 528

 Score = 46.1 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 1/54 (1%)

Query: 53  HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPK 106
           HAE+ AI    +  S EI     +YVT  PC  CA  I L+ I  +++    PK
Sbjct: 383 HAEMHAIFNAFKDHSSEI-TGGSIYVTTFPCHNCARHIVLSGIMNIHFIEPYPK 435


>gi|260463178|ref|ZP_05811380.1| CMP/dCMP deaminase zinc-binding [Mesorhizobium opportunistum
           WSM2075]
 gi|259031028|gb|EEW32302.1| CMP/dCMP deaminase zinc-binding [Mesorhizobium opportunistum
           WSM2075]
          Length = 197

 Score = 46.1 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 15/90 (16%), Positives = 32/90 (35%), Gaps = 8/90 (8%)

Query: 16  QNAALRNEIPVGAVAVLNNK---IISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILP 72
           +          GA  +  +    +++   N      +   H E+  ++    +   E + 
Sbjct: 23  EEGVAHGNKLFGAAILRKHDRSLVLAETNNEIE---NPLWHGEVHCLKRFYEMPRAERVD 79

Query: 73  --EVDLYVTLEPCTMCAAAISLARIRRLYY 100
             +     T EPC++C +AI+       YY
Sbjct: 80  TKDAIFLATHEPCSLCLSAITWTGFDNFYY 109


>gi|314924011|gb|EFS87842.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Propionibacterium acnes HL001PA1]
          Length = 152

 Score = 46.1 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 28/130 (21%), Positives = 44/130 (33%), Gaps = 40/130 (30%)

Query: 4   GNVFMSCALEEAQNAALR-NEIPVGAVAVLNNKIISRAGN-------------RNRELKD 49
              F+  A  EA +A  +     VGA+ V  ++II+   N               R   D
Sbjct: 15  DQYFLGIA--EAVSARAKCTRRRVGALLVHEHRIIATGYNGAAPGRPDCLEGACPRGRLD 72

Query: 50  ------------------VTA-HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAI 90
                               A HAE+ A+     + +         YVT +PC  C  A+
Sbjct: 73  YGEVPAFSDYDVPGSPGFCIAIHAEMNAL-----LFATRDTAGSTAYVTDKPCYGCRKAL 127

Query: 91  SLARIRRLYY 100
           + A + R  +
Sbjct: 128 AAAGVVRAVW 137


>gi|156402718|ref|XP_001639737.1| predicted protein [Nematostella vectensis]
 gi|156226867|gb|EDO47674.1| predicted protein [Nematostella vectensis]
          Length = 452

 Score = 45.7 bits (108), Expect = 0.002,   Method: Composition-based stats.
 Identities = 20/119 (16%), Positives = 43/119 (36%), Gaps = 21/119 (17%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKDVTA---HAEILAIRMGCRILSQEILPEVDLYVTLEP 82
           VG+V VL         +      D +    H  ++ +        QE      +Y++  P
Sbjct: 60  VGSVIVLP--------SDRALSVDCSRNDVHGGVIGL----YKFGQERYKGCTVYLSRRP 107

Query: 83  CTMCAAAISLARIRRLYYGASNP------KGGGIENGTQFYTLATCHHSPEIYPGISEQ 135
           C+ C   +  A + ++YY  + P          ++N     ++      PE+   + ++
Sbjct: 108 CSYCTKLLIQAGVVKVYYLPTEPEVNDPQDIKAVDNLFIVASVGLSPFIPEVNKVVLQE 166


>gi|327325690|gb|EGE67487.1| deoxycytidylate deaminase [Propionibacterium acnes HL096PA3]
          Length = 152

 Score = 45.7 bits (108), Expect = 0.002,   Method: Composition-based stats.
 Identities = 28/130 (21%), Positives = 45/130 (34%), Gaps = 40/130 (30%)

Query: 4   GNVFMSCALEEAQNAALR-NEIPVGAVAVLNNKIISRAGN-------------RNRELKD 49
              F+  A  EA +A  +     VGA+ V  ++II+   N               R   D
Sbjct: 15  DQYFLGIA--EAVSARAKCTRRRVGALLVHEHRIIATGYNGAAPGRPDCLEGACPRGRLD 72

Query: 50  ------------------VTA-HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAI 90
                               A HAE+ A+     + +         YVT +PC+ C  A+
Sbjct: 73  YGEVPAFSDYDVPGSPGFCIAIHAEMNAL-----LFATRDTAGSTAYVTDKPCSGCRKAL 127

Query: 91  SLARIRRLYY 100
           + A + R  +
Sbjct: 128 AAAGVVRAVW 137


>gi|282855290|ref|ZP_06264622.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Propionibacterium acnes J139]
 gi|289425655|ref|ZP_06427427.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Propionibacterium acnes SK187]
 gi|289426995|ref|ZP_06428714.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Propionibacterium acnes J165]
 gi|295131477|ref|YP_003582140.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Propionibacterium acnes SK137]
 gi|282581878|gb|EFB87263.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Propionibacterium acnes J139]
 gi|289153956|gb|EFD02649.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Propionibacterium acnes SK187]
 gi|289159817|gb|EFD08002.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Propionibacterium acnes J165]
 gi|291377168|gb|ADE01023.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Propionibacterium acnes SK137]
 gi|313763352|gb|EFS34716.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Propionibacterium acnes HL013PA1]
 gi|313773396|gb|EFS39362.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Propionibacterium acnes HL074PA1]
 gi|313793535|gb|EFS41578.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Propionibacterium acnes HL110PA1]
 gi|313802862|gb|EFS44075.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Propionibacterium acnes HL110PA2]
 gi|313806308|gb|EFS44824.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Propionibacterium acnes HL087PA2]
 gi|313810706|gb|EFS48420.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Propionibacterium acnes HL083PA1]
 gi|313814995|gb|EFS52709.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Propionibacterium acnes HL059PA1]
 gi|313819419|gb|EFS57133.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Propionibacterium acnes HL046PA2]
 gi|313821226|gb|EFS58940.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Propionibacterium acnes HL036PA1]
 gi|313822320|gb|EFS60034.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Propionibacterium acnes HL036PA2]
 gi|313826122|gb|EFS63836.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Propionibacterium acnes HL063PA1]
 gi|313831010|gb|EFS68724.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Propionibacterium acnes HL007PA1]
 gi|313833143|gb|EFS70857.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Propionibacterium acnes HL056PA1]
 gi|313838217|gb|EFS75931.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Propionibacterium acnes HL086PA1]
 gi|314916719|gb|EFS80550.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Propionibacterium acnes HL005PA4]
 gi|314919155|gb|EFS82986.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Propionibacterium acnes HL050PA1]
 gi|314921235|gb|EFS85066.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Propionibacterium acnes HL050PA3]
 gi|314926066|gb|EFS89897.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Propionibacterium acnes HL036PA3]
 gi|314930337|gb|EFS94168.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Propionibacterium acnes HL067PA1]
 gi|314956120|gb|EFT00516.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Propionibacterium acnes HL027PA1]
 gi|314959653|gb|EFT03755.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Propionibacterium acnes HL002PA1]
 gi|314962227|gb|EFT06328.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Propionibacterium acnes HL002PA2]
 gi|314963259|gb|EFT07359.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Propionibacterium acnes HL082PA1]
 gi|314967161|gb|EFT11260.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Propionibacterium acnes HL082PA2]
 gi|314973919|gb|EFT18015.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Propionibacterium acnes HL053PA1]
 gi|314976847|gb|EFT20942.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Propionibacterium acnes HL045PA1]
 gi|314979367|gb|EFT23461.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Propionibacterium acnes HL072PA2]
 gi|314983031|gb|EFT27123.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Propionibacterium acnes HL110PA3]
 gi|314984969|gb|EFT29061.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Propionibacterium acnes HL005PA1]
 gi|314986357|gb|EFT30449.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Propionibacterium acnes HL005PA2]
 gi|314988547|gb|EFT32638.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Propionibacterium acnes HL005PA3]
 gi|315079740|gb|EFT51728.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Propionibacterium acnes HL053PA2]
 gi|315080992|gb|EFT52968.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Propionibacterium acnes HL078PA1]
 gi|315083945|gb|EFT55921.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Propionibacterium acnes HL027PA2]
 gi|315085082|gb|EFT57058.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Propionibacterium acnes HL002PA3]
 gi|315089511|gb|EFT61487.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Propionibacterium acnes HL072PA1]
 gi|315091627|gb|EFT63603.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Propionibacterium acnes HL110PA4]
 gi|315093884|gb|EFT65860.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Propionibacterium acnes HL060PA1]
 gi|315097755|gb|EFT69731.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Propionibacterium acnes HL038PA1]
 gi|315098123|gb|EFT70099.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Propionibacterium acnes HL059PA2]
 gi|315102747|gb|EFT74723.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Propionibacterium acnes HL046PA1]
 gi|315104103|gb|EFT76079.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Propionibacterium acnes HL050PA2]
 gi|327325804|gb|EGE67596.1| deoxycytidylate deaminase [Propionibacterium acnes HL103PA1]
 gi|327330862|gb|EGE72607.1| deoxycytidylate deaminase [Propionibacterium acnes HL096PA2]
 gi|327443374|gb|EGE90028.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Propionibacterium acnes HL043PA2]
 gi|327446498|gb|EGE93152.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Propionibacterium acnes HL043PA1]
 gi|327447592|gb|EGE94246.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Propionibacterium acnes HL013PA2]
 gi|327451759|gb|EGE98413.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Propionibacterium acnes HL087PA3]
 gi|327452265|gb|EGE98919.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Propionibacterium acnes HL083PA2]
 gi|327452482|gb|EGE99136.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Propionibacterium acnes HL092PA1]
 gi|328752304|gb|EGF65920.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Propionibacterium acnes HL025PA2]
 gi|328755417|gb|EGF69033.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Propionibacterium acnes HL020PA1]
 gi|328756990|gb|EGF70606.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Propionibacterium acnes HL087PA1]
 gi|328761604|gb|EGF75121.1| deoxycytidylate deaminase [Propionibacterium acnes HL099PA1]
 gi|332676348|gb|AEE73164.1| deoxycytidylate deaminase [Propionibacterium acnes 266]
          Length = 152

 Score = 45.7 bits (108), Expect = 0.002,   Method: Composition-based stats.
 Identities = 28/130 (21%), Positives = 45/130 (34%), Gaps = 40/130 (30%)

Query: 4   GNVFMSCALEEAQNAALR-NEIPVGAVAVLNNKIISRAGN-------------RNRELKD 49
              F+  A  EA +A  +     VGA+ V  ++II+   N               R   D
Sbjct: 15  DQYFLGIA--EAVSARAKCTRRRVGALLVHEHRIIATGYNGAAPGRPDCLEGACPRGRLD 72

Query: 50  ------------------VTA-HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAI 90
                               A HAE+ A+     + +         YVT +PC+ C  A+
Sbjct: 73  YGEVPAFSDYDVPGSPGFCIAIHAEMNAL-----LFATRDTAGSTAYVTDKPCSGCRKAL 127

Query: 91  SLARIRRLYY 100
           + A + R  +
Sbjct: 128 AAAGVVRAVW 137


>gi|237751530|ref|ZP_04582010.1| riboflavin biosynthesis protein [Helicobacter bilis ATCC 43879]
 gi|229372896|gb|EEO23287.1| riboflavin biosynthesis protein [Helicobacter bilis ATCC 43879]
          Length = 397

 Score = 45.7 bits (108), Expect = 0.002,   Method: Composition-based stats.
 Identities = 32/202 (15%), Positives = 59/202 (29%), Gaps = 72/202 (35%)

Query: 8   MSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG-- 62
           M  AL+ A  +     +P   VG++ + +N II+         K  + HAE+LA +    
Sbjct: 1   MRIALDYAW-SFQTLTLPNPCVGSLVLCDNTIIA----LQTHKKAGSPHAEVLACKEAFL 55

Query: 63  ----------------CRILS-------------------------------QEILPEVD 75
                           C+                                    I    +
Sbjct: 56  YKITHDEVAKRAVLESCKKQGLNKDNILSYLINTLQNMQDSKHIHEFITAYHSGIFHNCE 115

Query: 76  LYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIY 129
            +VTLEPC        CA  +     +R+     +              +        I 
Sbjct: 116 FFVTLEPCNHYGKTPPCAELLKTIAPKRIIIAHEDSTPKASGGANTLAHIP-------IT 168

Query: 130 PGISEQRSRQIIQDF--FKERR 149
            GI    + +++  F  ++++R
Sbjct: 169 HGILRDEAHKLLFPFLQWQKKR 190


>gi|223041133|ref|ZP_03611388.1| riboflavin biosynthesis protein RibD [Campylobacter rectus RM3267]
 gi|222877627|gb|EEF12753.1| riboflavin biosynthesis protein RibD [Campylobacter rectus RM3267]
          Length = 362

 Score = 45.7 bits (108), Expect = 0.002,   Method: Composition-based stats.
 Identities = 33/202 (16%), Positives = 57/202 (28%), Gaps = 63/202 (31%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVL-NNKIISRAGNRNRELKDVTAHAEI 56
           M     +MS A+++A         P   VG V +    +++S A ++         HAE 
Sbjct: 1   MINDEFYMSLAIKKAWE-FQILTYPNPAVGCVVLDAGGRLLSVAAHKRAGFL----HAEP 55

Query: 57  LA----------------IRMGCRILS---------------------------QEILPE 73
            A                +R     L                             ++L  
Sbjct: 56  SAVLLALCKKSEAFLHDFLREYNAALGIKFESVAELTNADLEPNFTYEYILQNHGDLLKG 115

Query: 74  VDLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPE 127
              YVTLEPC        CA  + L +   +     +        G              
Sbjct: 116 AKAYVTLEPCAHRGKTPPCAELLRLLKFAEVVIARGDENAVASG-GAHILQSGG----VA 170

Query: 128 IYPGISEQRSRQIIQDFFKERR 149
           +   +  Q + ++I+ F   +R
Sbjct: 171 VKFDVLRQGADELIEPFLAWQR 192


>gi|239623597|ref|ZP_04666628.1| deoxycytidylate deaminase [Clostridiales bacterium 1_7_47_FAA]
 gi|239521628|gb|EEQ61494.1| deoxycytidylate deaminase [Clostridiales bacterium 1_7_47FAA]
          Length = 161

 Score = 45.7 bits (108), Expect = 0.002,   Method: Composition-based stats.
 Identities = 23/108 (21%), Positives = 34/108 (31%), Gaps = 39/108 (36%)

Query: 27  GAVAVLNNKIISRAGN-----------------------RNRELKDVTA-HAEILAIRMG 62
           GAV V ++ ++S   N                       +        A HAE    +  
Sbjct: 35  GAVIVKDDVVVSTGYNGSPRGYDNCCDIGSCPRIKLGLHQGEGYGMCRAIHAE----QNA 90

Query: 63  CRILSQEILPEVDLYVTL-----------EPCTMCAAAISLARIRRLY 99
               S+E     DLY+             +PC +CA  I  A IR + 
Sbjct: 91  LLNCSREQTMGADLYLAGVNPVDNTVHRAKPCPVCARMIIQAGIRNVI 138


>gi|160934054|ref|ZP_02081441.1| hypothetical protein CLOLEP_02917 [Clostridium leptum DSM 753]
 gi|156866727|gb|EDO60099.1| hypothetical protein CLOLEP_02917 [Clostridium leptum DSM 753]
          Length = 162

 Score = 45.7 bits (108), Expect = 0.002,   Method: Composition-based stats.
 Identities = 31/137 (22%), Positives = 43/137 (31%), Gaps = 45/137 (32%)

Query: 2   KKGNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAG--------NR-------N 44
            K N ++  A   A+      RN    GA+ V  ++IIS           N         
Sbjct: 5   DKENYYLDIAETVAERGTCLRRN---FGAIIVNKDQIISTGYVGAPRGRRNCIDLGYCVR 61

Query: 45  RELKDVTA---------HAEILAIRMGCRILSQEILPEVDLYVTLE------------PC 83
             L+             HAE  AI    R    + L    LY+  +            PC
Sbjct: 62  ESLQIPRGERYELCRSVHAEANAIIHASR---NDTLGG-TLYLVGKNAADNSYVENAAPC 117

Query: 84  TMCAAAISLARIRRLYY 100
           +MC   I  A I R+  
Sbjct: 118 SMCKRMIINAGIVRVII 134


>gi|50843399|ref|YP_056626.1| deoxycytidylate deaminase [Propionibacterium acnes KPA171202]
 gi|50841001|gb|AAT83668.1| deoxycytidylate deaminase [Propionibacterium acnes KPA171202]
 gi|313813655|gb|EFS51369.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Propionibacterium acnes HL025PA1]
 gi|315107956|gb|EFT79932.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Propionibacterium acnes HL030PA1]
 gi|327333108|gb|EGE74835.1| deoxycytidylate deaminase [Propionibacterium acnes HL097PA1]
          Length = 152

 Score = 45.7 bits (108), Expect = 0.002,   Method: Composition-based stats.
 Identities = 28/130 (21%), Positives = 45/130 (34%), Gaps = 40/130 (30%)

Query: 4   GNVFMSCALEEAQNAALR-NEIPVGAVAVLNNKIISRAGN-------------RNRELKD 49
              F+  A  EA +A  +     VGA+ V  ++II+   N               R   D
Sbjct: 15  DQYFLGIA--EAVSARAKCTRRRVGALLVHEHRIIATGYNGAAPGRPDCLEGACPRGRLD 72

Query: 50  ------------------VTA-HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAI 90
                               A HAE+ A+     + +         YVT +PC+ C  A+
Sbjct: 73  YGEVPAFSDYDVPGSPGFCIAIHAEMNAL-----LFATRDTAGSTAYVTDKPCSGCRKAL 127

Query: 91  SLARIRRLYY 100
           + A + R  +
Sbjct: 128 AAAGVVRAVW 137


>gi|308069982|ref|YP_003871587.1| deoxycytidylate deaminase (dCMP deaminase) [Paenibacillus polymyxa
           E681]
 gi|305859261|gb|ADM71049.1| Deoxycytidylate deaminase (dCMP deaminase) [Paenibacillus polymyxa
           E681]
          Length = 172

 Score = 45.7 bits (108), Expect = 0.002,   Method: Composition-based stats.
 Identities = 26/134 (19%), Positives = 40/134 (29%), Gaps = 36/134 (26%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNR-------------------- 43
              FM  A   +  +       VGAV V   K++  A N                     
Sbjct: 10  DTYFMDIAYMVSTRSRCARRH-VGAVLVQGKKLLGTAYNGAPSGVPDCSEAGCMISEEYE 68

Query: 44  -----------NRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISL 92
                       ++    T HAE    +       +       +YVT +PC  CA  ++ 
Sbjct: 69  VVHRDGREEMVKKQRCIRTIHAE----QNLLLFTDRIDREGSSVYVTDQPCWTCANMLAN 124

Query: 93  ARIRRLYYGASNPK 106
           + I  + Y    PK
Sbjct: 125 SGIVEIVYHRPYPK 138


>gi|313829388|gb|EFS67102.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Propionibacterium acnes HL063PA2]
 gi|314969803|gb|EFT13901.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Propionibacterium acnes HL037PA1]
 gi|315108887|gb|EFT80863.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Propionibacterium acnes HL030PA2]
          Length = 152

 Score = 45.7 bits (108), Expect = 0.002,   Method: Composition-based stats.
 Identities = 28/130 (21%), Positives = 45/130 (34%), Gaps = 40/130 (30%)

Query: 4   GNVFMSCALEEAQNAALR-NEIPVGAVAVLNNKIISRAGN-------------RNRELKD 49
              F+  A  EA +A  +     VGA+ V  ++II+   N               R   D
Sbjct: 15  DQYFLGIA--EAVSARAKCTRRRVGALLVHEHRIIATGYNGAAPGRPDCLEGACPRGRLD 72

Query: 50  ------------------VTA-HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAI 90
                               A HAE+ A+     + +         YVT +PC+ C  A+
Sbjct: 73  YGEVPAFSDYDVPGSPGFCIAIHAEMNAL-----LFATRDTAGSTAYVTDKPCSGCRKAL 127

Query: 91  SLARIRRLYY 100
           + A + R  +
Sbjct: 128 AAAGVVRAVW 137


>gi|312880721|ref|ZP_07740521.1| CMP/dCMP deaminase zinc-binding [Aminomonas paucivorans DSM 12260]
 gi|310784012|gb|EFQ24410.1| CMP/dCMP deaminase zinc-binding [Aminomonas paucivorans DSM 12260]
          Length = 187

 Score = 45.7 bits (108), Expect = 0.002,   Method: Composition-based stats.
 Identities = 19/75 (25%), Positives = 31/75 (41%), Gaps = 3/75 (4%)

Query: 27  GAVAVLNN-KIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85
           GAV      + ++   NR     +   H EI  I     +       E     T EPC+M
Sbjct: 42  GAVLDPETLQPLAVGSNRR--GDNPVFHGEIDTILRFFELPDHPAPGETVFLATHEPCSM 99

Query: 86  CAAAISLARIRRLYY 100
           C +A++ +  R ++Y
Sbjct: 100 CLSALAWSGFREVWY 114


>gi|218194431|gb|EEC76858.1| hypothetical protein OsI_15040 [Oryza sativa Indica Group]
          Length = 288

 Score = 45.3 bits (107), Expect = 0.003,   Method: Composition-based stats.
 Identities = 27/187 (14%), Positives = 48/187 (25%), Gaps = 75/187 (40%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNR--------------- 45
           M    V++   +E A+ AA                                         
Sbjct: 53  MDDDGVYIRRCVELARKAA--------------------GHTSPNPMVGCVVVRGGRVVG 92

Query: 46  -----ELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLAR 94
                E      HAE+ A+R    +           YV+LEPC        C  A+  A+
Sbjct: 93  EGFHPEAGQP--HAEVFALRDAGDLAEN-----ATAYVSLEPCNHYGRTPPCTEALINAK 145

Query: 95  IRRLYY---------------GASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQR--S 137
           ++ +                 G ++P       G +    A             E+    
Sbjct: 146 VKDVVVMWGLTYERRPRSIVDGMTDPNPIVASKGIERLQSAGIDVRV-----CMEEEALC 200

Query: 138 RQIIQDF 144
           R++ + +
Sbjct: 201 RKLNEAY 207


>gi|310643093|ref|YP_003947851.1| cmp/dcmp deaminase, zinc-binding protein [Paenibacillus polymyxa
           SC2]
 gi|309248043|gb|ADO57610.1| CMP/dCMP deaminase, zinc-binding protein [Paenibacillus polymyxa
           SC2]
          Length = 172

 Score = 45.3 bits (107), Expect = 0.003,   Method: Composition-based stats.
 Identities = 26/134 (19%), Positives = 40/134 (29%), Gaps = 36/134 (26%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNR-------------------- 43
              FM  A   +  +       VGAV V   K++  A N                     
Sbjct: 10  DTYFMDIAYMVSTRSRCARRH-VGAVLVQGKKLLGTAYNGAPSGVPDCSEAGCMISEEYE 68

Query: 44  -----------NRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISL 92
                       ++    T HAE    +       +       +YVT +PC  CA  ++ 
Sbjct: 69  VVHRDGREEMVKKQRCIRTIHAE----QNLLLFTDRIDREGSSVYVTDQPCWTCANMLAN 124

Query: 93  ARIRRLYYGASNPK 106
           + I  + Y    PK
Sbjct: 125 SGIVEIVYHRPYPK 138


>gi|66801791|ref|XP_629815.1| hypothetical protein DDB_G0292080 [Dictyostelium discoideum AX4]
 gi|60463203|gb|EAL61396.1| hypothetical protein DDB_G0292080 [Dictyostelium discoideum AX4]
          Length = 320

 Score = 45.3 bits (107), Expect = 0.003,   Method: Composition-based stats.
 Identities = 21/113 (18%), Positives = 34/113 (30%), Gaps = 20/113 (17%)

Query: 33  NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISL 92
           N  ++    N      ++  H E+ AI     + +      + LY T EPC MC      
Sbjct: 96  NGTLLCHGVNT--GKPNLMTHGEVAAINNCTSLYNISSYTNMTLYTTGEPCAMCLI---- 149

Query: 93  ARIRRLYYGASNPK------GGGIENGTQFYTLATCHHS---PEIYPGISEQR 136
                + +G  N         G I   + +            P +  GI    
Sbjct: 150 -----VVWGTWNSDLMCKVCMGQIPMDSNYIFSRYYGVRATPPTLIGGILRNE 197


>gi|169605061|ref|XP_001795951.1| hypothetical protein SNOG_05546 [Phaeosphaeria nodorum SN15]
 gi|160706699|gb|EAT86610.2| hypothetical protein SNOG_05546 [Phaeosphaeria nodorum SN15]
          Length = 393

 Score = 45.3 bits (107), Expect = 0.003,   Method: Composition-based stats.
 Identities = 15/40 (37%), Positives = 24/40 (60%)

Query: 73  EVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIEN 112
           ++D+Y+T EPC MC+ AI  +R RR  +       GG+ +
Sbjct: 296 DLDIYLTNEPCVMCSMAILHSRFRRCIFSTRMSHTGGMTS 335


>gi|166710619|ref|ZP_02241826.1| riboflavin-specific deaminase; 5-amino-6-uracil reductase
          [Xanthomonas oryzae pv. oryzicola BLS256]
          Length = 80

 Score = 45.3 bits (107), Expect = 0.003,   Method: Composition-based stats.
 Identities = 10/44 (22%), Positives = 18/44 (40%), Gaps = 2/44 (4%)

Query: 3  KGNVFMSCALEEAQN-AALRNEIP-VGAVAVLNNKIISRAGNRN 44
            + +M+ AL  A+  A      P VG V V +   +    ++ 
Sbjct: 11 DDHRWMAQALRLAERGAYTTRPNPMVGCVIVRDGVCVGEGFHQR 54


>gi|229825684|ref|ZP_04451753.1| hypothetical protein GCWU000182_01047 [Abiotrophia defectiva ATCC
           49176]
 gi|229790247|gb|EEP26361.1| hypothetical protein GCWU000182_01047 [Abiotrophia defectiva ATCC
           49176]
          Length = 162

 Score = 45.3 bits (107), Expect = 0.003,   Method: Composition-based stats.
 Identities = 27/116 (23%), Positives = 39/116 (33%), Gaps = 42/116 (36%)

Query: 27  GAVAVLNNKIISRAG--------NRN------RELKDVTA----------HAEILAIRMG 62
           GAV V N+++I+           N +      RE  +V            HAE  AI   
Sbjct: 29  GAVIVKNDEVIATGYTGAPRGRKNCSDLGFCMREKLNVPRGERYELCRSVHAEQNAIISA 88

Query: 63  CRILSQEILPEVDLYVTL------------EPCTMCAAAISLARIRRLYYGASNPK 106
            R    E L   ++Y+                C MC   I  A I ++Y    + K
Sbjct: 89  SR----EELIGSNIYIVGIETRDGSYVANANSCAMCKRVIINAGIEKVYI--RDDK 138


>gi|238496847|ref|XP_002379659.1| DRAP deaminase, putative [Aspergillus flavus NRRL3357]
 gi|220694539|gb|EED50883.1| DRAP deaminase, putative [Aspergillus flavus NRRL3357]
          Length = 222

 Score = 45.3 bits (107), Expect = 0.003,   Method: Composition-based stats.
 Identities = 33/170 (19%), Positives = 57/170 (33%), Gaps = 46/170 (27%)

Query: 4   GNVFMSCALEEAQNAALRNEIP----VGAVAVL---------NNKIISRAGNRNRELKDV 50
              ++   L  A+ +  R   P    VGA+ V          +++I+S            
Sbjct: 5   HAKYLRECLSLAEKSPPR---PTNFRVGAILVSRKEGDYKTEDDRIVSTGYTMELAGN-- 59

Query: 51  TAHAEILAI-----------RMGCRILSQEILPEVDLYVTLEPC-------TMCAAAISL 92
             HAE   +                +L  E   ++ +YVT+EPC         C   I  
Sbjct: 60  -THAEQCCLSNYAAVHSVPEDRVWEVLPSEPDRKLVMYVTMEPCGKRLSGNLPCVQRIIR 118

Query: 93  AR------IRRLYYGASNPKGGGIEN-GTQFYTLATCHHSPEIYPGISEQ 135
            R      I+++Y+G   P      + G Q  T A      ++  G+  +
Sbjct: 119 TRQGDRKGIQKVYFGVKEPGTFVGGSEGCQMLTAAGIDW--QVVNGLERE 166


>gi|213965736|ref|ZP_03393929.1| cytidine deaminase [Corynebacterium amycolatum SK46]
 gi|213951687|gb|EEB63076.1| cytidine deaminase [Corynebacterium amycolatum SK46]
          Length = 139

 Score = 45.3 bits (107), Expect = 0.003,   Method: Composition-based stats.
 Identities = 20/97 (20%), Positives = 33/97 (34%), Gaps = 5/97 (5%)

Query: 25  PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI-RMGCRILSQEILPEVDLY----VT 79
           PVGA  +L++  +    N       +T  AE  A+ RM         +    +       
Sbjct: 28  PVGAALLLDDGTVVTGCNVENASYGLTNCAERTAVFRMVAEHGGNHKIAACAIVGRKAAP 87

Query: 80  LEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116
             PC  C   +     +R+   +  P  GG+   T  
Sbjct: 88  CHPCGACRQVLHEFGCKRVIVESERPTDGGLGAPTSI 124


>gi|302405827|ref|XP_003000750.1| deoxycytidylate deaminase [Verticillium albo-atrum VaMs.102]
 gi|261360707|gb|EEY23135.1| deoxycytidylate deaminase [Verticillium albo-atrum VaMs.102]
          Length = 147

 Score = 45.3 bits (107), Expect = 0.003,   Method: Composition-based stats.
 Identities = 19/87 (21%), Positives = 32/87 (36%), Gaps = 13/87 (14%)

Query: 46  ELKDVTAHAEILAIRM---------GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIR 96
           E      H EI  I+            R    +   +   + T EPC++C + I+ +  +
Sbjct: 56  ERTSPLLHGEINCIQKFYTVSHPDPASRPSPGD---DCVFFATHEPCSLCLSGITWSGFK 112

Query: 97  RLYYGASNPKGGGIENGTQFYTLATCH 123
            LY+  S  +   +   T F    T H
Sbjct: 113 ELYF-LSLLEFTALCRRTSFAVSPTYH 138


>gi|172040661|ref|YP_001800375.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Corynebacterium urealyticum DSM 7109]
 gi|171851965|emb|CAQ04941.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Corynebacterium urealyticum DSM 7109]
          Length = 357

 Score = 45.3 bits (107), Expect = 0.003,   Method: Composition-based stats.
 Identities = 26/129 (20%), Positives = 40/129 (31%), Gaps = 28/129 (21%)

Query: 25  PVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83
           PVG V V +   I+ R             HAE++         +         Y TLEPC
Sbjct: 38  PVGCVIVDSAGTILGRGATEPAGG----RHAEVV-----ALQAAGARAAGATAYATLEPC 88

Query: 84  TM------CAAAISLARIRRLYYGASNP------------KGGGIENGTQFYTLATCHHS 125
                   CA A+  A +  ++Y  ++P              G   +G          H 
Sbjct: 89  NHTGRTGPCAEALIAAGVAEVHYLFADPGKAEGGGGERLRAAGVTVSGPYLEPFHLGEHR 148

Query: 126 PEIYPGISE 134
             + P +  
Sbjct: 149 FSVEPWLRA 157


>gi|207092337|ref|ZP_03240124.1| riboflavin biosynthesis protein [Helicobacter pylori
           HPKX_438_AG0C1]
          Length = 344

 Score = 44.9 bits (106), Expect = 0.003,   Method: Composition-based stats.
 Identities = 31/151 (20%), Positives = 50/151 (33%), Gaps = 45/151 (29%)

Query: 1   MKKGNVFMSCALEEAQN----AALRNEIP-VGA-VAVLNNKIISRAGNRNRELKDVTAHA 54
           M+     +   L +A      A      P V   V   N++I+S         K  T+HA
Sbjct: 1   MRLYESLLEMCLNKAWEHQTLALEN---PSVACMVLDKNHEILS----LETHKKAKTSHA 53

Query: 55  EILAIRMGCRIL------------------------SQEILPEVDLYVTLEPC------T 84
           E+LA +   +IL                              +    +TLEPC       
Sbjct: 54  EVLAAKSALKILRPHLKSDLEKLEDPKTLSDFLKTHHDNAFKDCVFLITLEPCNSYGKTP 113

Query: 85  MCAAAISLARIRRLYYGAS--NPKGGGIENG 113
            C+  + + + +R+   A     K GG+E  
Sbjct: 114 ACSGLLEILKPKRVVIAAEENEAKKGGLERL 144


>gi|320590398|gb|EFX02841.1| cytidine and deoxycytidylate deaminase [Grosmannia clavigera
           kw1407]
          Length = 173

 Score = 44.9 bits (106), Expect = 0.003,   Method: Composition-based stats.
 Identities = 40/163 (24%), Positives = 57/163 (34%), Gaps = 37/163 (22%)

Query: 3   KGNVFMSCALEEAQNAALRNEIP----VGAVAVL--NNKIISRAGNRNRELKDVTAHAEI 56
               +M  AL  A+ +  R   P    VGAV V   + +I++       EL   T HAE 
Sbjct: 8   DHPAYMRHALSLAEKSPPR---PSNFRVGAVLVDAASGRILADGF--TLELHGNT-HAEQ 61

Query: 57  LAIRMGCRILS--QEILP---------EVDLYVTLEPC--------TMCAAAISLARIRR 97
                        +E L          ++ LY T+EPC           A  + LA  +R
Sbjct: 62  CCFMKLAAQHGVAEEDLSALPLTALPAQLALYTTMEPCSLRLSGNDPCVARVLRLAGHQR 121

Query: 98  ---LYYGASNP-KGGGIENGTQFYTLATCH--HSPEIYPGISE 134
              +Y G + P K      G      A  H  H P +   I +
Sbjct: 122 SVTVYVGVTEPDKFVAQNTGRSTLEAAGIHVVHVPGLETAILD 164


>gi|300361667|ref|ZP_07057844.1| riboflavin biosynthesis protein ribBA [Lactobacillus gasseri
          JV-V03]
 gi|300354286|gb|EFJ70157.1| riboflavin biosynthesis protein ribBA [Lactobacillus gasseri
          JV-V03]
          Length = 96

 Score = 44.9 bits (106), Expect = 0.003,   Method: Composition-based stats.
 Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 2/38 (5%)

Query: 1  MKKGNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKI 36
          M+K   +M+ AL+EA+       + P VGAV V   KI
Sbjct: 1  MEKDQYYMNLALQEAKKGRFQTWKNPLVGAVIVKELKI 38


>gi|119481501|ref|XP_001260779.1| cytidine and deoxycytidylate deaminase zinc-binding domain protein
           [Neosartorya fischeri NRRL 181]
 gi|119408933|gb|EAW18882.1| cytidine and deoxycytidylate deaminase zinc-binding domain protein
           [Neosartorya fischeri NRRL 181]
          Length = 215

 Score = 44.9 bits (106), Expect = 0.003,   Method: Composition-based stats.
 Identities = 28/139 (20%), Positives = 47/139 (33%), Gaps = 43/139 (30%)

Query: 4   GNVFMSCALEEAQNAALRNEIP----VGAVAV---------LNNKIISRAGNRNRELKDV 50
              ++   L  A+ +  R   P    VGA+ V          +++I+S            
Sbjct: 6   HLDYLRQCLSLAERSPPR---PTNFRVGAILVSHKDGDLECKDDRILSTGYTMELAGN-- 60

Query: 51  TAHAEILAI-----------RMGCRILSQEILPEVDLYVTLEPC-------TMCAAAISL 92
             HAE   +                +L  E   ++ +YVT+EPC         C   I  
Sbjct: 61  -THAEQCCLSNYAAVHSVPEDKVAEVLPSEPGRKLVMYVTMEPCGKRLSGNVPCVQRIIS 119

Query: 93  AR------IRRLYYGASNP 105
            R      I+++Y+G   P
Sbjct: 120 TREGGRPGIQKVYFGVKEP 138


>gi|325291364|ref|YP_004267545.1| CMP/dCMP deaminase zinc-binding protein [Syntrophobotulus
           glycolicus DSM 8271]
 gi|324966765|gb|ADY57544.1| CMP/dCMP deaminase zinc-binding protein [Syntrophobotulus
           glycolicus DSM 8271]
          Length = 148

 Score = 44.9 bits (106), Expect = 0.004,   Method: Composition-based stats.
 Identities = 29/133 (21%), Positives = 41/133 (30%), Gaps = 43/133 (32%)

Query: 4   GNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGN---------------RNRE 46
              F+  A   ++ +    RN    GAV V +N I+S   N                  E
Sbjct: 9   DEYFLELAGLISRRSTCLRRN---YGAVIVKDNIIVSTGYNGAARGEDNCIDIKKCTREE 65

Query: 47  LKDVTA---------HAEILAIRMGCRILSQEILPEVDLYVTL----------EPCTMCA 87
                          HAE  AI  G        +    +YV            EPC +C 
Sbjct: 66  RNIPPGERYELCVAVHAEQNAIIAG----DPVKMQNGTIYVAGYHGNGEPAPSEPCLLCR 121

Query: 88  AAISLARIRRLYY 100
             I  A I+R+ +
Sbjct: 122 RMIKNAMIKRVVF 134


>gi|224005639|ref|XP_002291780.1| predicted protein [Thalassiosira pseudonana CCMP1335]
 gi|220972299|gb|EED90631.1| predicted protein [Thalassiosira pseudonana CCMP1335]
          Length = 286

 Score = 44.9 bits (106), Expect = 0.004,   Method: Composition-based stats.
 Identities = 19/96 (19%), Positives = 32/96 (33%), Gaps = 30/96 (31%)

Query: 34  NKIISRAGNRNR-ELKDVTAHAEILAIRMGCRILSQEILPEV------------------ 74
            +II+ A N +  +  D   HAEI AI    + +  +   +                   
Sbjct: 146 GRIIAAATNTSLFKEGDSDVHAEINAIGQVAKQIFAQQSHDTQTTKSIPNSQTHQQTKHP 205

Query: 75  -----------DLYVTLEPCTMCAAAISLARIRRLY 99
                        Y+T+ PC  C  A+  + I R+ 
Sbjct: 206 TMQSMASTLGATAYITMPPCKKCFGALYASGITRIV 241


>gi|256372450|ref|YP_003110274.1| riboflavin biosynthesis protein RibD [Acidimicrobium ferrooxidans
           DSM 10331]
 gi|256009034|gb|ACU54601.1| riboflavin biosynthesis protein RibD [Acidimicrobium ferrooxidans
           DSM 10331]
          Length = 350

 Score = 44.9 bits (106), Expect = 0.004,   Method: Composition-based stats.
 Identities = 23/96 (23%), Positives = 33/96 (34%), Gaps = 15/96 (15%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC-- 83
           VGAV   +  ++       R       HAE+          +  +     + VTLEPC  
Sbjct: 25  VGAVIERDGVVVGVG----RTAHPGGPHAEVA-----ALAAAGALARGAQMSVTLEPCAH 75

Query: 84  ----TMCAAAISLARIRRLYYGASNPKGGGIENGTQ 115
                 C  AI  A + R+  G  +P       G Q
Sbjct: 76  HGRTPPCVDAIIEAGVARVEVGLIDPDPRVRGRGIQ 111


>gi|213027853|ref|ZP_03342300.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Salmonella enterica subsp. enterica serovar
           Typhi str. 404ty]
          Length = 320

 Score = 44.9 bits (106), Expect = 0.004,   Method: Composition-based stats.
 Identities = 25/104 (24%), Positives = 36/104 (34%), Gaps = 15/104 (14%)

Query: 52  AHAEILAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNP 105
           AHAE+ A+RM               YVTLEPC        C  A+  A + R+     +P
Sbjct: 2   AHAEVHALRMAGAKAKGAT-----AYVTLEPCSHHGRTPPCCDALIAAGVARVVAAMQDP 56

Query: 106 KGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149
                  G      A       +  G+    +  + + F K  R
Sbjct: 57  NPQVAGRGLYRLQQAG----IAVSHGLMMSEAEALNKGFLKRMR 96


>gi|302791619|ref|XP_002977576.1| hypothetical protein SELMODRAFT_106737 [Selaginella moellendorffii]
 gi|300154946|gb|EFJ21580.1| hypothetical protein SELMODRAFT_106737 [Selaginella moellendorffii]
          Length = 561

 Score = 44.9 bits (106), Expect = 0.004,   Method: Composition-based stats.
 Identities = 24/109 (22%), Positives = 37/109 (33%), Gaps = 16/109 (14%)

Query: 4   GNVFMSCALEEAQ-NAALRNEIPV-GAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
            +  M  A E A  +A      P    V   + K++  A          T  AEI A+ M
Sbjct: 9   DSFHMLRAAELADGSAGHTAPHPNSACVIARSEKVVGEAF----LYGQGTRCAEIQAVEM 64

Query: 62  GCRILSQEILPEVDLYVTLEP--CT---MCAAAISLARIRRLYYGASNP 105
              +           Y+ LEP  C        A+  + + R+  G  +P
Sbjct: 65  AGELS-----RGATAYLNLEPGDCHGDDTAIKALKQSGVARVVVGLQHP 108


>gi|224043372|ref|XP_002198216.1| PREDICTED: cytidine and dCMP deaminase domain containing 1
           [Taeniopygia guttata]
          Length = 489

 Score = 44.9 bits (106), Expect = 0.004,   Method: Composition-based stats.
 Identities = 23/78 (29%), Positives = 32/78 (41%), Gaps = 13/78 (16%)

Query: 29  VAVLNNKIISRAGNRNRELKDVTA-HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCA 87
           V V N KII             T  HA  +A+     I     L   DLY + +PC+ C 
Sbjct: 63  VVVKNMKIIG-------LHCSSTDLHAGQIAL-----IKHGSRLKNCDLYFSRKPCSTCL 110

Query: 88  AAISLARIRRLYYGASNP 105
             I  A + R+ Y  ++P
Sbjct: 111 KMIVNAGVNRISYWPADP 128



 Score = 33.7 bits (77), Expect = 7.5,   Method: Composition-based stats.
 Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 4/56 (7%)

Query: 53  HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGG 108
           HAE  A+   CR +  +      ++VT  PC  C   I  A I+++Y  A +   G
Sbjct: 373 HAEQNALTFRCREIKPDERSM--IFVTKCPCDECVPLIKGAGIKQIY--AGDVDAG 424


>gi|134119006|ref|XP_772006.1| hypothetical protein CNBN1840 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|50254610|gb|EAL17359.1| hypothetical protein CNBN1840 [Cryptococcus neoformans var.
           neoformans B-3501A]
          Length = 205

 Score = 44.9 bits (106), Expect = 0.004,   Method: Composition-based stats.
 Identities = 22/130 (16%), Positives = 40/130 (30%), Gaps = 33/130 (25%)

Query: 33  NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQ----------------EILPEVDL 76
              I++   +R         HAE  A+    ++  +                 +L +V  
Sbjct: 75  QGLILADGWSRQIAGN---THAEANALTNFRKVYGELLEGTDSTTSDLPPIENVLADVSC 131

Query: 77  YVTLEPC-------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIY 129
           Y T+EPC         CA  +  +++  +Y G   P       G +           E+ 
Sbjct: 132 YATMEPCSVRTSGGPSCALELVRSKVNSVYLGVEEPPDFVQCEGVRILQDGN----IEVI 187

Query: 130 --PGISEQRS 137
              G  E+  
Sbjct: 188 RVSG-LEEEC 196


>gi|302786796|ref|XP_002975169.1| hypothetical protein SELMODRAFT_102410 [Selaginella moellendorffii]
 gi|300157328|gb|EFJ23954.1| hypothetical protein SELMODRAFT_102410 [Selaginella moellendorffii]
          Length = 563

 Score = 44.9 bits (106), Expect = 0.004,   Method: Composition-based stats.
 Identities = 24/109 (22%), Positives = 37/109 (33%), Gaps = 16/109 (14%)

Query: 4   GNVFMSCALEEAQ-NAALRNEIPV-GAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
            +  M  A E A  +A      P    V   + K++  A          T  AEI A+ M
Sbjct: 9   DSFHMLRAAELADGSAGHTAPHPNSACVIARSEKVVGEAF----LYGQGTRCAEIQAVEM 64

Query: 62  GCRILSQEILPEVDLYVTLEP--CT---MCAAAISLARIRRLYYGASNP 105
              +           Y+ LEP  C        A+  + + R+  G  +P
Sbjct: 65  AGELS-----RGATAYLNLEPGDCHGDDTAIKALKQSGVARVVVGLQHP 108


>gi|194396984|ref|YP_002036742.1| cytosine/adenosine deaminase [Streptococcus pneumoniae G54]
 gi|194356651|gb|ACF55099.1| Cytosine/adenosine deaminase [Streptococcus pneumoniae G54]
          Length = 38

 Score = 44.9 bits (106), Expect = 0.004,   Method: Composition-based stats.
 Identities = 8/30 (26%), Positives = 11/30 (36%)

Query: 95  IRRLYYGASNPKGGGIENGTQFYTLATCHH 124
              + YGA N K G   +     T    +H
Sbjct: 4   FPNVVYGAKNQKFGAAGSLYNILTDERLNH 33


>gi|171681774|ref|XP_001905830.1| hypothetical protein [Podospora anserina S mat+]
 gi|170940846|emb|CAP66496.1| unnamed protein product [Podospora anserina S mat+]
          Length = 224

 Score = 44.5 bits (105), Expect = 0.004,   Method: Composition-based stats.
 Identities = 20/80 (25%), Positives = 31/80 (38%), Gaps = 7/80 (8%)

Query: 26  VGAVAVLNNKI--ISRAGNRNRELKDVTAHAEILAIRMG---CRILSQEILPEVDLYVTL 80
            GA  +  + +  I+ A N   E      H EI  I+         S+        + T 
Sbjct: 44  FGASILSRDTLSPITTATN--NEALSPLLHGEINCIQQFFTTIPPSSRPSPSSCIFFATH 101

Query: 81  EPCTMCAAAISLARIRRLYY 100
           EPC++C + I+ A     YY
Sbjct: 102 EPCSLCLSGITWAGFNEFYY 121


>gi|302881563|ref|XP_003039693.1| hypothetical protein NECHADRAFT_104881 [Nectria haematococca mpVI
           77-13-4]
 gi|256720558|gb|EEU33980.1| hypothetical protein NECHADRAFT_104881 [Nectria haematococca mpVI
           77-13-4]
          Length = 219

 Score = 44.5 bits (105), Expect = 0.004,   Method: Composition-based stats.
 Identities = 15/66 (22%), Positives = 24/66 (36%), Gaps = 14/66 (21%)

Query: 45  RELKDVTAHAEILAIRMGCRILSQEILP----------EVDLYVTLEPCTMCAAAISLAR 94
            E      H EI  I    +    E  P          +   + T EPC++C + I+ + 
Sbjct: 55  NERVSPLLHGEINCI----QKFYTETFPNPVDRPSTRDDCVFFATHEPCSLCLSGITWSG 110

Query: 95  IRRLYY 100
            +  YY
Sbjct: 111 FKEFYY 116


>gi|108804202|ref|YP_644139.1| diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Rubrobacter xylanophilus DSM 9941]
 gi|108765445|gb|ABG04327.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Rubrobacter xylanophilus DSM 9941]
          Length = 369

 Score = 44.5 bits (105), Expect = 0.004,   Method: Composition-based stats.
 Identities = 22/84 (26%), Positives = 32/84 (38%), Gaps = 15/84 (17%)

Query: 75  DLYVTLEPC--------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
            +YVTLEPC          CA A+  A IRRL  G ++P         +    A      
Sbjct: 61  TMYVTLEPCNHHLRTPGPPCAEAVLRAGIRRLVVGHADPNPRVNGRSLRRLREAG----V 116

Query: 127 EIYPGISEQR-SRQIIQDFFKERR 149
           E+   + +     +  + FF   R
Sbjct: 117 EVE--VLDDPVFERQNERFFWAMR 138


>gi|212528776|ref|XP_002144545.1| deoxycytidylate deaminase, putative [Penicillium marneffei ATCC
           18224]
 gi|210073943|gb|EEA28030.1| deoxycytidylate deaminase, putative [Penicillium marneffei ATCC
           18224]
          Length = 291

 Score = 44.5 bits (105), Expect = 0.005,   Method: Composition-based stats.
 Identities = 25/108 (23%), Positives = 33/108 (30%), Gaps = 36/108 (33%)

Query: 4   GNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGN---RNRELKD--------- 49
              FM  A   AQ +    R    VG V V + ++IS   N   RN    +         
Sbjct: 193 DQYFMQLASLAAQRSNCMKRR---VGCVIVRDRRVISTGYNGTPRNITNCNEGGCPRCNR 249

Query: 50  -----------VTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMC 86
                      +  HAE  A+    R   +E      LY     C  C
Sbjct: 250 GEGGGAGLSTCLCIHAEENALLEAGRERIRE---GAILY-----CDTC 289


>gi|331270444|ref|YP_004396936.1| CMP/dCMP deaminase, zinc-binding protein [Clostridium botulinum
           BKT015925]
 gi|329126994|gb|AEB76939.1| CMP/dCMP deaminase, zinc-binding protein [Clostridium botulinum
           BKT015925]
          Length = 162

 Score = 44.5 bits (105), Expect = 0.005,   Method: Composition-based stats.
 Identities = 27/107 (25%), Positives = 37/107 (34%), Gaps = 32/107 (29%)

Query: 26  VGAVAVLNNKIISRAG--------N-------RNRELK--DVTA-------HAEILAIRM 61
            GA+ V N++IIS           N       R  ELK    T        HAE  AI  
Sbjct: 28  FGAIIVKNDEIISSGYTGSPRGRKNCCDLGICRREELKVERGTRYELCRSVHAEQNAIIS 87

Query: 62  GCR--------ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
             R         L  + +   +L     PC++C   I  A I ++  
Sbjct: 88  ARRQDMLDGALYLVGKEMSNGELVKNAAPCSLCKRFIINAGISKVII 134


>gi|71001942|ref|XP_755652.1| DRAP deaminase [Aspergillus fumigatus Af293]
 gi|66853290|gb|EAL93614.1| DRAP deaminase, putative [Aspergillus fumigatus Af293]
          Length = 215

 Score = 44.5 bits (105), Expect = 0.005,   Method: Composition-based stats.
 Identities = 28/139 (20%), Positives = 48/139 (34%), Gaps = 43/139 (30%)

Query: 4   GNVFMSCALEEAQNAALRNEIP----VGAVAV---------LNNKIISRAGNRNRELKDV 50
              ++  +L  A+ +  R   P    VGA+ V          +++I+S            
Sbjct: 6   HLDYLRQSLSLAERSPPR---PTNFRVGAILVSRKDGDLEFKDDRILSTGYTMELAGN-- 60

Query: 51  TAHAEILAI-----------RMGCRILSQEILPEVDLYVTLEPC-------TMCAAAISL 92
             HAE   +                +L  E   ++ +YVT+EPC         C   I  
Sbjct: 61  -THAEQCCLSNYAAVHSVPEDKVAEVLPAEPGRKLVMYVTMEPCGKRLSGNVPCVQRIIS 119

Query: 93  AR------IRRLYYGASNP 105
            R      I+++Y+G   P
Sbjct: 120 TRAGGRPGIQKVYFGVKEP 138


>gi|47124267|gb|AAH70238.1| CDADC1 protein [Homo sapiens]
          Length = 251

 Score = 44.5 bits (105), Expect = 0.005,   Method: Composition-based stats.
 Identities = 22/77 (28%), Positives = 34/77 (44%), Gaps = 11/77 (14%)

Query: 29  VAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAA 88
           V V N KI+      + +L     HA  +A+     I     L   DLY + +PC+ C  
Sbjct: 91  VVVKNMKIVGL-HCSSEDL-----HAGQIAL-----IKHGSRLKNCDLYFSRKPCSACLK 139

Query: 89  AISLARIRRLYYGASNP 105
            I  A + R+ Y  ++P
Sbjct: 140 MIVNAGVNRISYWPADP 156


>gi|62204160|gb|AAH92434.1| CDADC1 protein [Homo sapiens]
          Length = 251

 Score = 44.5 bits (105), Expect = 0.005,   Method: Composition-based stats.
 Identities = 22/77 (28%), Positives = 34/77 (44%), Gaps = 11/77 (14%)

Query: 29  VAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAA 88
           V V N KI+      + +L     HA  +A+     I     L   DLY + +PC+ C  
Sbjct: 91  VVVKNMKIVGL-HCSSEDL-----HAGQIAL-----IKHGSRLKNCDLYFSRKPCSACLK 139

Query: 89  AISLARIRRLYYGASNP 105
            I  A + R+ Y  ++P
Sbjct: 140 MIVNAGVNRISYWPADP 156


>gi|295658617|ref|XP_002789869.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb01]
 gi|226283013|gb|EEH38579.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb01]
          Length = 499

 Score = 44.5 bits (105), Expect = 0.005,   Method: Composition-based stats.
 Identities = 17/73 (23%), Positives = 26/73 (35%), Gaps = 15/73 (20%)

Query: 64  RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY----------GASNPKGGGIENG 113
           R     +   +DLY+T EPC  CA  + L+R R + Y           A +P  G     
Sbjct: 400 RAQGGYLCTSLDLYITHEPCVCCAMGMLLSRFRAVVYLQPAGEGRVDAALDPYTG----- 454

Query: 114 TQFYTLATCHHSP 126
              +     +   
Sbjct: 455 YGLHWRQELNWRV 467


>gi|223997260|ref|XP_002288303.1| predicted protein [Thalassiosira pseudonana CCMP1335]
 gi|220975411|gb|EED93739.1| predicted protein [Thalassiosira pseudonana CCMP1335]
          Length = 416

 Score = 44.5 bits (105), Expect = 0.005,   Method: Composition-based stats.
 Identities = 24/158 (15%), Positives = 44/158 (27%), Gaps = 34/158 (21%)

Query: 10  CALEEAQNAALRNEIPVGAVAV---LNN--KIISRAGNR-------NRELKDVT-----A 52
            A   A+   +R +   GAV      +   ++I R  N            K+        
Sbjct: 250 EAAHLAREGVVRAKH--GAVIYIPTEDGGTQVIGRGYNHDFVLHRSKEAKKNKIVLHSEI 307

Query: 53  HAEILAIRMGCR-ILSQEILPEVDL----------YVTLEPCTMCAAAISLARIRRLYYG 101
           HA + AI           + P+  +          Y T  PC  C   +    IR++ + 
Sbjct: 308 HAVVDAIDTYGEDECFNNLFPKATVMIVELVSDYAYDTCHPCPKCNPMLRAVGIRKVIHT 367

Query: 102 ASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQ 139
             +    G+                E+     +    +
Sbjct: 368 TPD----GVNAKLNLGAGNIEFLRLEVVSIPLKAACEE 401


>gi|219128638|ref|XP_002184515.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217403965|gb|EEC43914.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 227

 Score = 44.5 bits (105), Expect = 0.005,   Method: Composition-based stats.
 Identities = 19/90 (21%), Positives = 29/90 (32%), Gaps = 7/90 (7%)

Query: 16  QNAALRNEIPVGAVAVLNN-KIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEIL--- 71
           +    +     GA  +  N   +    N   E      H E+  I    +I+        
Sbjct: 50  EQGVAKGNKVFGAAVLDANFGTVLAGTNS--ETTCPLFHGEVKVIYEWSKIVPASERGAA 107

Query: 72  -PEVDLYVTLEPCTMCAAAISLARIRRLYY 100
                   T EPC MC ++I  A    +YY
Sbjct: 108 AQSSVFLATHEPCCMCVSSILWAGFHTIYY 137


>gi|296112127|ref|YP_003622509.1| hypothetical protein LKI_10005 [Leuconostoc kimchii IMSNU 11154]
 gi|295833659|gb|ADG41540.1| hypothetical protein LKI_10005 [Leuconostoc kimchii IMSNU 11154]
          Length = 82

 Score = 44.5 bits (105), Expect = 0.005,   Method: Composition-based stats.
 Identities = 15/48 (31%), Positives = 19/48 (39%), Gaps = 4/48 (8%)

Query: 26 VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPE 73
          VGA+ V NN+II+   +         AHAEI A        S      
Sbjct: 28 VGAIIVQNNQIIATGHHEAFGQ----AHAEINAFNHLKDKKSNYWRNG 71


>gi|254712462|ref|ZP_05174273.1| CMP/dCMP deaminase zinc-binding protein [Brucella ceti M644/93/1]
 gi|254715535|ref|ZP_05177346.1| CMP/dCMP deaminase zinc-binding protein [Brucella ceti M13/05/1]
 gi|261217271|ref|ZP_05931552.1| CMP/dCMP deaminase zinc-binding protein [Brucella ceti M13/05/1]
 gi|261320142|ref|ZP_05959339.1| CMP/dCMP deaminase zinc-binding protein [Brucella ceti M644/93/1]
 gi|260922360|gb|EEX88928.1| CMP/dCMP deaminase zinc-binding protein [Brucella ceti M13/05/1]
 gi|261292832|gb|EEX96328.1| CMP/dCMP deaminase zinc-binding protein [Brucella ceti M644/93/1]
          Length = 199

 Score = 44.5 bits (105), Expect = 0.005,   Method: Composition-based stats.
 Identities = 15/90 (16%), Positives = 33/90 (36%), Gaps = 8/90 (8%)

Query: 16  QNAALRNEIPVGAVAVLNNK---IISRAGNRNRELKDVTAHAEILAIRMGCRILSQEI-- 70
           +          GA  +  +    +++   N      +   H E+  ++    +  +E   
Sbjct: 25  ERGVAEGNKVFGAALLRKSDLSLVLAETNNETE---NPLWHGEVHTLKRFYEMPEKERPD 81

Query: 71  LPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
             ++      EPC+MC +AI+ +     YY
Sbjct: 82  TKDMVFLSIHEPCSMCLSAITWSGFDNFYY 111


>gi|110597493|ref|ZP_01385780.1| CMP/dCMP deaminase, zinc-binding [Chlorobium ferrooxidans DSM
           13031]
 gi|110341037|gb|EAT59508.1| CMP/dCMP deaminase, zinc-binding [Chlorobium ferrooxidans DSM
           13031]
          Length = 313

 Score = 44.5 bits (105), Expect = 0.005,   Method: Composition-based stats.
 Identities = 16/67 (23%), Positives = 26/67 (38%), Gaps = 3/67 (4%)

Query: 42  NRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
           N   ++   + HAE  A     +      +    L+ T  PC +CA       I ++YY 
Sbjct: 204 NEKNQVHTRSLHAEENAFLQMAK-YGSTGIEGGLLFTTASPCELCAKKAYQLGITQIYY- 261

Query: 102 ASNPKGG 108
             +P  G
Sbjct: 262 -IDPYPG 267


>gi|160878347|ref|YP_001557315.1| CMP/dCMP deaminase zinc-binding [Clostridium phytofermentans ISDg]
 gi|160427013|gb|ABX40576.1| CMP/dCMP deaminase zinc-binding [Clostridium phytofermentans ISDg]
          Length = 162

 Score = 44.5 bits (105), Expect = 0.005,   Method: Composition-based stats.
 Identities = 23/106 (21%), Positives = 32/106 (30%), Gaps = 32/106 (30%)

Query: 27  GAVAVLNNKIISRAG-------------NRNRELK-----------DVTAHAEILAIRMG 62
           GAV V N++II+                N     K             + HAE  AI   
Sbjct: 29  GAVIVNNDEIIATGYVGAPRGRANCSDLNYCIRTKLSVPRGERYELCRSVHAEANAIISA 88

Query: 63  CR--------ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
            R         L    +P++        C+MC   I  A I  +  
Sbjct: 89  PREKMLGSTLYLVGFEMPDMTYIQNANSCSMCKRMIINAGIESVVI 134


>gi|321265852|ref|XP_003197642.1| hypothetical protein CGB_N3030C [Cryptococcus gattii WM276]
 gi|317464122|gb|ADV25855.1| Hypothetical protein CGB_N3030C [Cryptococcus gattii WM276]
          Length = 205

 Score = 44.5 bits (105), Expect = 0.005,   Method: Composition-based stats.
 Identities = 24/131 (18%), Positives = 38/131 (29%), Gaps = 35/131 (26%)

Query: 33  NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVD----------------- 75
              I++   +R         HAE  A+    R    E+L   D                 
Sbjct: 75  EGLILADGWSRQIPGN---THAEANALTNF-RKFYGELLEGTDSTTSDLPPIENVLADVS 130

Query: 76  LYVTLEPC-------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEI 128
            Y T+EPC         CA  +  +++  +Y G   P       G +           E+
Sbjct: 131 CYATMEPCSVRTSGGPSCALELVRSKVNSVYLGVEEPPDFVQCEGVRILQDGN----IEV 186

Query: 129 Y--PGISEQRS 137
               G  E+  
Sbjct: 187 ISVSG-LEEEC 196


>gi|294661491|ref|YP_003579944.1| Cd dCMP deaminase [Klebsiella phage KP15]
 gi|292660652|gb|ADE34900.1| Cd dCMP deaminase [Klebsiella phage KP15]
          Length = 185

 Score = 44.5 bits (105), Expect = 0.005,   Method: Composition-based stats.
 Identities = 20/68 (29%), Positives = 28/68 (41%), Gaps = 8/68 (11%)

Query: 53  HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAI---SLAR-IRRLYYGASNPKGG 108
           HAE+  I +       E + +  LY T  PC+ CA  I        I+R+ Y       G
Sbjct: 100 HAEMRVIMLAASH---EQIKDATLYTTHSPCSQCAKNIEFCVATGMIKRVVY-LHKYDRG 155

Query: 109 GIENGTQF 116
           GIE   + 
Sbjct: 156 GIEWIWRL 163


>gi|240273786|gb|EER37305.1| tRNA-specific adenosine-34 deaminase subunit Tad3 [Ajellomyces
           capsulatus H143]
 gi|325094782|gb|EGC48092.1| tRNA-specific adenosine-34 deaminase subunit Tad3 [Ajellomyces
           capsulatus H88]
          Length = 486

 Score = 44.1 bits (104), Expect = 0.006,   Method: Composition-based stats.
 Identities = 17/56 (30%), Positives = 24/56 (42%), Gaps = 10/56 (17%)

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY----------GASNPKGG 108
            R     +   +DLY+T EPC  CA  + L+R R + Y           A +P  G
Sbjct: 393 ARTQGGYLCTSLDLYITHEPCVCCAMGMLLSRFRAVVYLQATGPGRADAALDPYTG 448


>gi|225555471|gb|EEH03763.1| conserved hypothetical protein [Ajellomyces capsulatus G186AR]
          Length = 486

 Score = 44.1 bits (104), Expect = 0.006,   Method: Composition-based stats.
 Identities = 17/56 (30%), Positives = 24/56 (42%), Gaps = 10/56 (17%)

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY----------GASNPKGG 108
            R     +   +DLY+T EPC  CA  + L+R R + Y           A +P  G
Sbjct: 393 ARTQGGYLCTSLDLYITHEPCVCCAMGMLLSRFRAVVYLQATGPGRADAALDPYTG 448


>gi|253681165|ref|ZP_04861968.1| cytidine and deoxycytidylate deaminase family protein [Clostridium
           botulinum D str. 1873]
 gi|253563014|gb|EES92460.1| cytidine and deoxycytidylate deaminase family protein [Clostridium
           botulinum D str. 1873]
          Length = 162

 Score = 44.1 bits (104), Expect = 0.006,   Method: Composition-based stats.
 Identities = 27/107 (25%), Positives = 37/107 (34%), Gaps = 32/107 (29%)

Query: 26  VGAVAVLNNKIISRAG--------N-------RNRELK--DVTA-------HAEILAIRM 61
            GA+ V N++IIS           N       R  ELK    T        HAE  AI  
Sbjct: 28  FGAIIVKNDEIISSGYTGSPRGRKNCCDLGICRREELKVERGTRYELCRSVHAEQNAIIS 87

Query: 62  GCR--------ILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
             R         L  + +   +L     PC++C   I  A I ++  
Sbjct: 88  ARRQDMLEGVLYLVGKEMSNGELVENAAPCSLCKRFIINAGISKVII 134


>gi|159129710|gb|EDP54824.1| DRAP deaminase, putative [Aspergillus fumigatus A1163]
          Length = 215

 Score = 44.1 bits (104), Expect = 0.006,   Method: Composition-based stats.
 Identities = 28/139 (20%), Positives = 47/139 (33%), Gaps = 43/139 (30%)

Query: 4   GNVFMSCALEEAQNAALRNEIP----VGAVAV---------LNNKIISRAGNRNRELKDV 50
              ++   L  A+ +  R   P    VGA+ V          +++I+S            
Sbjct: 6   HLDYLRQCLSLAERSPPR---PTNFRVGAILVSRKDGDLEFKDDRILSTGYTMELAGN-- 60

Query: 51  TAHAEILAI-----------RMGCRILSQEILPEVDLYVTLEPC-------TMCAAAISL 92
             HAE   +                +L  E   ++ +YVT+EPC         C   I  
Sbjct: 61  -THAEQCCLSNYAAVHSVPEDKVAEVLPAEPGRKLVMYVTMEPCGKRLSGNVPCVQRIIS 119

Query: 93  AR------IRRLYYGASNP 105
            R      I+++Y+G   P
Sbjct: 120 TRAGGRPGIQKVYFGVKEP 138


>gi|88808247|ref|ZP_01123758.1| cytidine/deoxycytidylate deaminase family protein [Synechococcus
           sp. WH 7805]
 gi|88788286|gb|EAR19442.1| cytidine/deoxycytidylate deaminase family protein [Synechococcus
           sp. WH 7805]
          Length = 227

 Score = 44.1 bits (104), Expect = 0.006,   Method: Composition-based stats.
 Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 2/57 (3%)

Query: 46  ELKDVTAHAEILAIRMGCRILSQEIL-PEVDLYV-TLEPCTMCAAAISLARIRRLYY 100
           E  +   HAE+  I     +  Q+ + P   L++ T EPCT+C++AI+ A     YY
Sbjct: 77  ETLNPLFHAEVQTINHYYSMPKQQHVAPGDVLFLATHEPCTLCSSAITWAGFDNFYY 133


>gi|169774581|ref|XP_001821758.1| DRAP deaminase [Aspergillus oryzae RIB40]
 gi|83769621|dbj|BAE59756.1| unnamed protein product [Aspergillus oryzae]
          Length = 222

 Score = 44.1 bits (104), Expect = 0.006,   Method: Composition-based stats.
 Identities = 33/170 (19%), Positives = 57/170 (33%), Gaps = 46/170 (27%)

Query: 4   GNVFMSCALEEAQNAALRNEIP----VGAVAVL---------NNKIISRAGNRNRELKDV 50
              ++   L  A+ +  R   P    VGA+ V          +++I+S            
Sbjct: 5   HAKYLRECLSLAEKSPPR---PTNFRVGAILVSRKEGDYKTEDDRIVSTGYTMELAGN-- 59

Query: 51  TAHAEILAI-----------RMGCRILSQEILPEVDLYVTLEPC-------TMCAAAISL 92
             HAE   +                +L  E   ++ +YVT+EPC         C   I  
Sbjct: 60  -THAEQCCLSNYAAVHSVPEDRVWEVLPSEPDRKLVMYVTMEPCGKRLSGNLPCVQRIIR 118

Query: 93  AR------IRRLYYGASNPKGGGIEN-GTQFYTLATCHHSPEIYPGISEQ 135
            R      I+++Y+G   P      + G Q  T A      ++  G+  +
Sbjct: 119 TRQGDRKGIQKIYFGVKEPGTFVGGSEGCQMLTAAGIDW--QVVNGLERE 166


>gi|46204084|ref|ZP_00209252.1| COG1985: Pyrimidine reductase, riboflavin biosynthesis
           [Magnetospirillum magnetotacticum MS-1]
          Length = 320

 Score = 44.1 bits (104), Expect = 0.006,   Method: Composition-based stats.
 Identities = 12/79 (15%), Positives = 24/79 (30%), Gaps = 11/79 (13%)

Query: 70  ILPEVDLYVTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123
            +      VTLEPC        CA A+  A +  +     +P         +        
Sbjct: 29  DVAGATAVVTLEPCAHTGRTGPCADALVAAGVAEVVLAVDDPNPVATGGAHRLRAA---- 84

Query: 124 HSPEIYPGISEQRSRQIIQ 142
               +  G+      ++++
Sbjct: 85  -GVRVVRGLRAAEGEELLR 102


>gi|282599202|ref|YP_003358514.1| Cd allosteric enzyme [Shigella phage phiSboM-AG3]
 gi|226973508|gb|ACO94261.1| Cd allosteric enzyme [Shigella phage phiSboM-AG3]
          Length = 168

 Score = 44.1 bits (104), Expect = 0.006,   Method: Composition-based stats.
 Identities = 20/92 (21%), Positives = 33/92 (35%), Gaps = 19/92 (20%)

Query: 26  VGAVAVLN--NKIISRAGNRN--------RELKDV------TAHAEILAIRMGCRILSQE 69
           VG V V    ++ +S   N           +  D         HAE  A+    +    E
Sbjct: 29  VGCVIVDPRVDQPLSIGWNGTAPGAPNVCEQEVDGQLVSVGVIHAEENALSKLPQH--TE 86

Query: 70  ILPEVDLYVTLEPCTMCAAAISLAR-IRRLYY 100
               + ++VT  PC  C   I  +  I +++Y
Sbjct: 87  DCCGLVMFVTHSPCPECTRRIIDSGKIAKVFY 118


>gi|313836183|gb|EFS73897.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Propionibacterium acnes HL037PA2]
 gi|314927620|gb|EFS91451.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Propionibacterium acnes HL044PA1]
 gi|314971383|gb|EFT15481.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Propionibacterium acnes HL037PA3]
 gi|328906319|gb|EGG26094.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Propionibacterium sp. P08]
          Length = 152

 Score = 44.1 bits (104), Expect = 0.007,   Method: Composition-based stats.
 Identities = 27/130 (20%), Positives = 44/130 (33%), Gaps = 40/130 (30%)

Query: 4   GNVFMSCALEEAQNAALR-NEIPVGAVAVLNNKIISRAGNRNR----------------- 45
              F+  A  EA +A  +     VGA+ V  ++II+   N                    
Sbjct: 15  DEYFLGIA--EAVSARAKCTRRRVGALLVHEHRIIATGYNGAAPGRPDCLEGACPRGQLG 72

Query: 46  -------ELKDVTA--------HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAI 90
                     DV          HAE+ A+     + +         YVT +PC+ C  A+
Sbjct: 73  YGEVPAFSDYDVPGSPGFCIAIHAEVNAL-----LFATRDTAGSTAYVTDKPCSGCRKAL 127

Query: 91  SLARIRRLYY 100
           + A + R  +
Sbjct: 128 AAAGVVRAVW 137


>gi|302797462|ref|XP_002980492.1| hypothetical protein SELMODRAFT_420076 [Selaginella moellendorffii]
 gi|300152108|gb|EFJ18752.1| hypothetical protein SELMODRAFT_420076 [Selaginella moellendorffii]
          Length = 109

 Score = 44.1 bits (104), Expect = 0.007,   Method: Composition-based stats.
 Identities = 18/50 (36%), Positives = 22/50 (44%), Gaps = 8/50 (16%)

Query: 53  HAEILAI--RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
           HAE+ AI  R       Q       LYVT+ PC  CA  I  A I  + +
Sbjct: 28  HAEVNAILNRNHASASGQR------LYVTMFPCNECAKVIIQAGIAEVIF 71


>gi|326392730|ref|ZP_08214020.1| CMP/dCMP deaminase, zinc-binding [Thermoanaerobacter ethanolicus
          JW 200]
 gi|325991229|gb|EGD49931.1| CMP/dCMP deaminase, zinc-binding [Thermoanaerobacter ethanolicus
          JW 200]
          Length = 46

 Score = 44.1 bits (104), Expect = 0.007,   Method: Composition-based stats.
 Identities = 14/38 (36%), Positives = 17/38 (44%), Gaps = 2/38 (5%)

Query: 8  MSCALEEAQNAAL-RNEIP-VGAVAVLNNKIISRAGNR 43
          M  AL+  +      N  P VGAV V N KII    + 
Sbjct: 1  MKRALKLTEKGWGYTNPNPLVGAVIVKNGKIIGEGYHE 38


>gi|309358181|emb|CAP34555.2| hypothetical protein CBG_16641 [Caenorhabditis briggsae AF16]
          Length = 172

 Score = 44.1 bits (104), Expect = 0.007,   Method: Composition-based stats.
 Identities = 25/110 (22%), Positives = 45/110 (40%), Gaps = 15/110 (13%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNN--KIISRAGNRNRELKDVTAHAEILA 58
             + +++M+  L E   +      P G   V  +  +IIS   +     K+ +      A
Sbjct: 39  WHQHHMYMTRMLSEMSTSQE----PNGCYIVDEDNYQIIS-GYSGEVASKNDSCQC---A 90

Query: 59  IRMGCRILSQEILPE--VDLYVTLEP-CTMCAAAISLARIRRLYYGASNP 105
           I    R L ++ +      +Y+T  P CT C   I   +I +++Y   NP
Sbjct: 91  ILSALRKLEKKAISGDNFIMYITTFPSCTHCLERILHMKISKIWY--WNP 138


>gi|189053523|dbj|BAG35689.1| unnamed protein product [Homo sapiens]
          Length = 514

 Score = 43.7 bits (103), Expect = 0.007,   Method: Composition-based stats.
 Identities = 22/77 (28%), Positives = 34/77 (44%), Gaps = 11/77 (14%)

Query: 29  VAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAA 88
           V V N KI+      + +L     HA  +A+     I     L   DLY + +PC+ C  
Sbjct: 91  VVVKNMKIVGL-HCSSEDL-----HAGQIAL-----IKHGSRLKNCDLYFSRKPCSACLK 139

Query: 89  AISLARIRRLYYGASNP 105
            I  A + R+ Y  ++P
Sbjct: 140 MIVNAGVNRISYWPADP 156


>gi|327352571|gb|EGE81428.1| tRNA-specific adenosine-34 deaminase subunit Tad3 [Ajellomyces
           dermatitidis ATCC 18188]
          Length = 496

 Score = 43.7 bits (103), Expect = 0.007,   Method: Composition-based stats.
 Identities = 17/73 (23%), Positives = 26/73 (35%), Gaps = 15/73 (20%)

Query: 64  RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY----------GASNPKGGGIENG 113
           R     +   +DLY+T EPC  CA  + L+R R + Y           A +P  G     
Sbjct: 395 RTQGGYLCTSLDLYITHEPCVCCAMGMLLSRFRAVVYLQATGPGRADAALDPYTG----- 449

Query: 114 TQFYTLATCHHSP 126
              +     +   
Sbjct: 450 YGLHWRQELNWRV 462


>gi|297274448|ref|XP_002800804.1| PREDICTED: cytidine and dCMP deaminase domain-containing protein
           1-like [Macaca mulatta]
          Length = 467

 Score = 43.7 bits (103), Expect = 0.007,   Method: Composition-based stats.
 Identities = 22/77 (28%), Positives = 34/77 (44%), Gaps = 11/77 (14%)

Query: 29  VAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAA 88
           V V N KI+      + +L     HA  +A+     I     L   DLY + +PC+ C  
Sbjct: 92  VVVKNMKIVGL-HCSSEDL-----HAGQIAL-----IKHGSRLKNCDLYFSRKPCSACLK 140

Query: 89  AISLARIRRLYYGASNP 105
            I  A + R+ Y  ++P
Sbjct: 141 MIVNAGVNRISYWPADP 157


>gi|239613670|gb|EEQ90657.1| conserved hypothetical protein [Ajellomyces dermatitidis ER-3]
          Length = 464

 Score = 43.7 bits (103), Expect = 0.007,   Method: Composition-based stats.
 Identities = 17/73 (23%), Positives = 26/73 (35%), Gaps = 15/73 (20%)

Query: 64  RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY----------GASNPKGGGIENG 113
           R     +   +DLY+T EPC  CA  + L+R R + Y           A +P  G     
Sbjct: 363 RTQGGYLCTSLDLYITHEPCVCCAMGMLLSRFRAVVYLQATGPGRADAALDPYTG----- 417

Query: 114 TQFYTLATCHHSP 126
              +     +   
Sbjct: 418 YGLHWRQELNWRV 430


>gi|261193096|ref|XP_002622954.1| conserved hypothetical protein [Ajellomyces dermatitidis SLH14081]
 gi|239589089|gb|EEQ71732.1| conserved hypothetical protein [Ajellomyces dermatitidis SLH14081]
          Length = 459

 Score = 43.7 bits (103), Expect = 0.007,   Method: Composition-based stats.
 Identities = 17/73 (23%), Positives = 26/73 (35%), Gaps = 15/73 (20%)

Query: 64  RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY----------GASNPKGGGIENG 113
           R     +   +DLY+T EPC  CA  + L+R R + Y           A +P  G     
Sbjct: 358 RTQGGYLCTSLDLYITHEPCVCCAMGMLLSRFRAVVYLQATGPGRADAALDPYTG----- 412

Query: 114 TQFYTLATCHHSP 126
              +     +   
Sbjct: 413 YGLHWRQELNWRV 425


>gi|116328771|ref|YP_798491.1| pyrimidine deaminase, riboflavin biosynthesis [Leptospira
           borgpetersenii serovar Hardjo-bovis L550]
 gi|116121515|gb|ABJ79558.1| Pyrimidine deaminase, riboflavin biosynthesis [Leptospira
           borgpetersenii serovar Hardjo-bovis L550]
          Length = 432

 Score = 43.7 bits (103), Expect = 0.007,   Method: Composition-based stats.
 Identities = 24/93 (25%), Positives = 36/93 (38%), Gaps = 20/93 (21%)

Query: 25  PVGAVA--VLNNKIISRAGNRNRELKDVTA--HAEILAIRMGCRILSQEILPE-VDLYVT 79
           PV  +   V N +I+++           T   HAE  A       +      E  +++VT
Sbjct: 28  PVSCLITDVDNARILAKGW------TSPTGGPHAERNA---YYEFVKNGFFKEPHNVWVT 78

Query: 80  LEPC------TMCAAAISLARIRRLYYGASNPK 106
           LEPC        C   I   + + LYYG  +P 
Sbjct: 79  LEPCTHSGKTPPCLDLILEHKPKTLYYGRKDPN 111


>gi|326914180|ref|XP_003203405.1| PREDICTED: cytidine and dCMP deaminase domain-containing protein
           1-like [Meleagris gallopavo]
          Length = 427

 Score = 43.7 bits (103), Expect = 0.008,   Method: Composition-based stats.
 Identities = 22/78 (28%), Positives = 31/78 (39%), Gaps = 13/78 (16%)

Query: 29  VAVLNNKIISRAGNRNRELKDVTA-HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCA 87
           V V N  II             T  HA  +A+     I     L   DLY + +PC+ C 
Sbjct: 42  VVVKNMTIIG-------LHCSSTDLHAGQIAL-----IKHGSRLKNCDLYFSRKPCSTCL 89

Query: 88  AAISLARIRRLYYGASNP 105
             I  A + R+ Y  ++P
Sbjct: 90  KMIVNAGVNRISYWPADP 107



 Score = 34.1 bits (78), Expect = 7.2,   Method: Composition-based stats.
 Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 4/56 (7%)

Query: 53  HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGG 108
           HAE  A+   CR +  +      ++VT  PC  C   I  A I+++Y  A +   G
Sbjct: 352 HAEQNALTFRCREIKPDERSM--IFVTKCPCDECVPLIKGAGIKQIY--AGDVDAG 403


>gi|291408950|ref|XP_002720791.1| PREDICTED: cytidine and dCMP deaminase domain containing 1
           [Oryctolagus cuniculus]
          Length = 514

 Score = 43.7 bits (103), Expect = 0.008,   Method: Composition-based stats.
 Identities = 22/77 (28%), Positives = 34/77 (44%), Gaps = 11/77 (14%)

Query: 29  VAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAA 88
           V V N KI+      + +L     HA  +A+     I     L   DLY + +PC+ C  
Sbjct: 91  VVVKNMKIVGL-HCSSEDL-----HAGQIAL-----IKHGSRLKNCDLYFSRKPCSACLK 139

Query: 89  AISLARIRRLYYGASNP 105
            I  A + R+ Y  ++P
Sbjct: 140 MIVNAGVNRISYWPADP 156


>gi|242065054|ref|XP_002453816.1| hypothetical protein SORBIDRAFT_04g018500 [Sorghum bicolor]
 gi|241933647|gb|EES06792.1| hypothetical protein SORBIDRAFT_04g018500 [Sorghum bicolor]
          Length = 522

 Score = 43.7 bits (103), Expect = 0.008,   Method: Composition-based stats.
 Identities = 22/118 (18%), Positives = 39/118 (33%), Gaps = 24/118 (20%)

Query: 3   KGNVFMSCALEEA-QNAALRNEIP-VGAVAVL--------NNKIISRAGNRNRELKDVTA 52
              + +  A + A ++A L +  P  G V           ++ ++             T 
Sbjct: 53  NDALLLRRAADVADRSAGLTSPHPNFGCVIARPQPNTDSTDSWVVGEGF----LYAQGTP 108

Query: 53  HAEILAIRMGCRILSQEILPEVDLYVTLEP--CT---MCAAAISLARIRRLYYGASNP 105
            AE+LA +                Y+ LEP  C        ++  A I R+  G  +P
Sbjct: 109 CAELLAAQEAGEHAC-----GSTAYLNLEPGDCFGDNTAVGSLVQAGITRVVVGLRHP 161


>gi|13569864|ref|NP_112173.1| cytidine and dCMP deaminase domain-containing protein 1 isoform 1
           [Homo sapiens]
 gi|55640261|ref|XP_522754.1| PREDICTED: cytidine and dCMP deaminase domain-containing protein 1
           isoform 3 [Pan troglodytes]
 gi|74724888|sp|Q9BWV3|CDAC1_HUMAN RecName: Full=Cytidine and dCMP deaminase domain-containing protein
           1; AltName: Full=Testis development protein NYD-SP15
 gi|13311007|gb|AAK16745.1| protein kinase NYD-SP15 [Homo sapiens]
 gi|115529089|gb|AAI25203.1| Cytidine and dCMP deaminase domain containing 1 [Homo sapiens]
 gi|119629222|gb|EAX08817.1| cytidine and dCMP deaminase domain containing 1, isoform CRA_c
           [Homo sapiens]
 gi|122889103|emb|CAI10890.2| cytidine and dCMP deaminase domain containing 1 [Homo sapiens]
          Length = 514

 Score = 43.7 bits (103), Expect = 0.008,   Method: Composition-based stats.
 Identities = 22/77 (28%), Positives = 34/77 (44%), Gaps = 11/77 (14%)

Query: 29  VAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAA 88
           V V N KI+      + +L     HA  +A+     I     L   DLY + +PC+ C  
Sbjct: 91  VVVKNMKIVGL-HCSSEDL-----HAGQIAL-----IKHGSRLKNCDLYFSRKPCSACLK 139

Query: 89  AISLARIRRLYYGASNP 105
            I  A + R+ Y  ++P
Sbjct: 140 MIVNAGVNRISYWPADP 156


>gi|301500692|ref|NP_001180407.1| cytidine and dCMP deaminase domain-containing protein 1 isoform 2
           [Homo sapiens]
 gi|332841300|ref|XP_003314191.1| PREDICTED: cytidine and dCMP deaminase domain-containing protein 1
           [Pan troglodytes]
          Length = 491

 Score = 43.7 bits (103), Expect = 0.008,   Method: Composition-based stats.
 Identities = 22/77 (28%), Positives = 34/77 (44%), Gaps = 11/77 (14%)

Query: 29  VAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAA 88
           V V N KI+      + +L     HA  +A+     I     L   DLY + +PC+ C  
Sbjct: 91  VVVKNMKIVGL-HCSSEDL-----HAGQIAL-----IKHGSRLKNCDLYFSRKPCSACLK 139

Query: 89  AISLARIRRLYYGASNP 105
            I  A + R+ Y  ++P
Sbjct: 140 MIVNAGVNRISYWPADP 156


>gi|296189270|ref|XP_002742710.1| PREDICTED: cytidine and dCMP deaminase domain-containing protein
           1-like [Callithrix jacchus]
          Length = 515

 Score = 43.7 bits (103), Expect = 0.009,   Method: Composition-based stats.
 Identities = 22/77 (28%), Positives = 34/77 (44%), Gaps = 11/77 (14%)

Query: 29  VAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAA 88
           V V N KI+      + +L     HA  +A+     I     L   DLY + +PC+ C  
Sbjct: 92  VVVKNMKIVGL-HCSSEDL-----HAGQIAL-----IKHGSRLKNCDLYFSRKPCSACLK 140

Query: 89  AISLARIRRLYYGASNP 105
            I  A + R+ Y  ++P
Sbjct: 141 MIVNAGVNRISYWPADP 157


>gi|75076287|sp|Q4R683|CDAC1_MACFA RecName: Full=Cytidine and dCMP deaminase domain-containing protein
           1
 gi|67970095|dbj|BAE01392.1| unnamed protein product [Macaca fascicularis]
          Length = 515

 Score = 43.7 bits (103), Expect = 0.009,   Method: Composition-based stats.
 Identities = 22/77 (28%), Positives = 34/77 (44%), Gaps = 11/77 (14%)

Query: 29  VAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAA 88
           V V N KI+      + +L     HA  +A+     I     L   DLY + +PC+ C  
Sbjct: 92  VVVKNMKIVGL-HCSSEDL-----HAGQIAL-----IKHGSRLKNCDLYFSRKPCSACLK 140

Query: 89  AISLARIRRLYYGASNP 105
            I  A + R+ Y  ++P
Sbjct: 141 MIVNAGVNRISYWPADP 157


>gi|197098636|ref|NP_001125631.1| cytidine and dCMP deaminase domain-containing protein 1 [Pongo
           abelii]
 gi|75055039|sp|Q5RAX4|CDAC1_PONAB RecName: Full=Cytidine and dCMP deaminase domain-containing protein
           1
 gi|55728693|emb|CAH91086.1| hypothetical protein [Pongo abelii]
          Length = 515

 Score = 43.7 bits (103), Expect = 0.009,   Method: Composition-based stats.
 Identities = 22/77 (28%), Positives = 34/77 (44%), Gaps = 11/77 (14%)

Query: 29  VAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAA 88
           V V N KI+      + +L     HA  +A+     I     L   DLY + +PC+ C  
Sbjct: 92  VVVKNMKIVGL-HCSSEDL-----HAGQIAL-----IKHGSRLKNCDLYFSRKPCSACLK 140

Query: 89  AISLARIRRLYYGASNP 105
            I  A + R+ Y  ++P
Sbjct: 141 MIVNAGVNRISYWPADP 157



 Score = 34.5 bits (79), Expect = 4.8,   Method: Composition-based stats.
 Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 2/52 (3%)

Query: 53  HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASN 104
           HAE  A+   C+ +  E      ++VT  PC  C   I  A I+++Y G  +
Sbjct: 399 HAERNALTFRCQEIKPEERSM--IFVTKCPCDECVPLIKGAGIKQIYAGDVD 448


>gi|58039442|ref|YP_191406.1| bifunctional riboflavin biosynthesis protein RibD [Gluconobacter
           oxydans 621H]
 gi|58001856|gb|AAW60750.1| Bifunctional riboflavin biosynthesis protein RibD [Gluconobacter
           oxydans 621H]
          Length = 349

 Score = 43.7 bits (103), Expect = 0.009,   Method: Composition-based stats.
 Identities = 23/141 (16%), Positives = 45/141 (31%), Gaps = 39/141 (27%)

Query: 26  VGA-VAVLNNKIISRAGNRNRELKDVTAHAEIL---------AIRMGCRILSQEILPEVD 75
           VG  +     +I++   +          HAE +          +      L         
Sbjct: 40  VGCTLLDAEGRILTVGVHPRVGQ----PHAEAMALAQARAAGVLDQARVAL--------- 86

Query: 76  LYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH----- 124
             VTLEPC        C+ A+  + +R ++ GA++P         +   +    H     
Sbjct: 87  --VTLEPCNHTGRTPPCSEALRNSPVREVWIGAADPNPQAAGGAARLREMPAGKHVVMLA 144

Query: 125 -SPEIYPGISEQRSRQIIQDF 144
             P++      +  R ++  F
Sbjct: 145 DRPDMTD--LARNCRALLAPF 163


>gi|332241927|ref|XP_003270136.1| PREDICTED: cytidine and dCMP deaminase domain-containing protein
           1-like [Nomascus leucogenys]
          Length = 515

 Score = 43.7 bits (103), Expect = 0.009,   Method: Composition-based stats.
 Identities = 22/77 (28%), Positives = 34/77 (44%), Gaps = 11/77 (14%)

Query: 29  VAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAA 88
           V V N KI+      + +L     HA  +A+     I     L   DLY + +PC+ C  
Sbjct: 92  VVVKNMKIVGL-HCSSEDL-----HAGQIAL-----IKHGSRLKNCDLYFSRKPCSACLK 140

Query: 89  AISLARIRRLYYGASNP 105
            I  A + R+ Y  ++P
Sbjct: 141 MIVNAGVNRISYWPADP 157


>gi|269792042|ref|YP_003316946.1| CMP/dCMP deaminase zinc-binding protein [Thermanaerovibrio
           acidaminovorans DSM 6589]
 gi|269099677|gb|ACZ18664.1| CMP/dCMP deaminase zinc-binding protein [Thermanaerovibrio
           acidaminovorans DSM 6589]
          Length = 186

 Score = 43.7 bits (103), Expect = 0.009,   Method: Composition-based stats.
 Identities = 13/64 (20%), Positives = 26/64 (40%), Gaps = 2/64 (3%)

Query: 37  ISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIR 96
           I    NR     +   H E+  +    ++  +    ++    T EPC MC +A++    +
Sbjct: 53  IVVGSNRR--SDNPVFHGEVETLLRFYQLKDRPKAEDLVFLATHEPCCMCFSALAWCGFK 110

Query: 97  RLYY 100
             +Y
Sbjct: 111 EAWY 114


>gi|75859026|ref|XP_868853.1| hypothetical protein AN9471.2 [Aspergillus nidulans FGSC A4]
 gi|40738399|gb|EAA57589.1| hypothetical protein AN9471.2 [Aspergillus nidulans FGSC A4]
 gi|259479858|tpe|CBF70466.1| TPA: DRAP deaminase, putative (AFU_orthologue; AFUA_2G13200)
           [Aspergillus nidulans FGSC A4]
          Length = 222

 Score = 43.4 bits (102), Expect = 0.010,   Method: Composition-based stats.
 Identities = 35/171 (20%), Positives = 55/171 (32%), Gaps = 48/171 (28%)

Query: 4   GNVFMSCALEEAQNAALRNEIP----VGAVAV--LNN-------KIISRAGNRNRELKDV 50
              ++   L  A+ A      P    VGA+ V   +        +++S            
Sbjct: 5   HLQYLQKCLSLAEQAPSL---PTNFRVGALLVSRKDGDLMTEHDELLSTGYTMELPGN-- 59

Query: 51  TAHAEILAI--RMGCRI-----LSQEILPEV-----DLYVTLEPC-------TMCAAAIS 91
             HAE   +      R         E+LP+       LYVT+EPC         C   I 
Sbjct: 60  -THAE-QCLLSNYASRHSVPEDRVSEVLPDTPGRKLVLYVTMEPCGKRLSGNLPCVQRII 117

Query: 92  LAR------IRRLYYGASNPKGGGIEN-GTQFYTLATCHHSPEIYPGISEQ 135
             R      I ++Y+G   P     E+ G +  T A       +  G+  +
Sbjct: 118 QTRKNGRRGIEKVYFGVKEPTTFVGESEGCKMLTEAGIQWR--VVQGLERE 166


>gi|115372272|ref|ZP_01459582.1| cytidine/deoxycytidylate deaminase family protein [Stigmatella
           aurantiaca DW4/3-1]
 gi|310817344|ref|YP_003949702.1| cytidine/deoxycytidylate deaminase family protein [Stigmatella
           aurantiaca DW4/3-1]
 gi|115370737|gb|EAU69662.1| cytidine/deoxycytidylate deaminase family protein [Stigmatella
           aurantiaca DW4/3-1]
 gi|309390416|gb|ADO67875.1| Cytidine/deoxycytidylate deaminase family protein [Stigmatella
           aurantiaca DW4/3-1]
          Length = 633

 Score = 43.4 bits (102), Expect = 0.010,   Method: Composition-based stats.
 Identities = 15/59 (25%), Positives = 24/59 (40%), Gaps = 2/59 (3%)

Query: 53  HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIE 111
           HAE+  +    R  +        L+VT  PC  CA  I  A +  + +    PK   ++
Sbjct: 479 HAEMDVLLSAARQGAST--QGCRLFVTTFPCHYCARHIVGAGVDEVQFIEPYPKSRALD 535


>gi|330986743|gb|EGH84846.1| deoxycytidylate deaminase [Pseudomonas syringae pv. lachrymans str.
           M301315]
          Length = 170

 Score = 43.4 bits (102), Expect = 0.010,   Method: Composition-based stats.
 Identities = 16/76 (21%), Positives = 31/76 (40%), Gaps = 7/76 (9%)

Query: 33  NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISL 92
            N+I         ++   + HAE  A     +   Q++     L+ T  PC +CA     
Sbjct: 18  QNEIEGE----KNQVHTRSLHAEENAFLQISKHGGQKV-SGGILFTTASPCELCAKKAYQ 72

Query: 93  ARIRRLYYGASNPKGG 108
             I+++++   +P  G
Sbjct: 73  LGIKKIFF--IDPYPG 86


>gi|307638162|gb|ADN80612.1| Diamino hydroxy phosphoribosyl amino pyrimidine
           deaminase/5-amino-6-5-phosphoribosyl amino
           uracilreductase [Helicobacter pylori 908]
 gi|325996761|gb|ADZ52166.1| Diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-5-phosphoribosylamino uracil
           reductase [Helicobacter pylori 2018]
 gi|325998356|gb|ADZ50564.1| putative riboflavin specific deaminase [Helicobacter pylori 2017]
          Length = 344

 Score = 43.4 bits (102), Expect = 0.010,   Method: Composition-based stats.
 Identities = 31/158 (19%), Positives = 53/158 (33%), Gaps = 49/158 (31%)

Query: 23  EIP-VGA-VAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL-------------- 66
           E P V   V   N++I+S         K  T HAE+LA +   +IL              
Sbjct: 24  ENPSVACMVLDKNHEILS----LETHKKAKTPHAEVLAAKSALKILRPSLKSDLEKLEDP 79

Query: 67  ----------SQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGAS--NPKGG 108
                           +    +TLEPC        C+  + + + +R+   A     K G
Sbjct: 80  KILSDFLKTRHDNAFKDCVFLITLEPCNSYGKTPACSGLLEILKPKRVVIAAEENEAKKG 139

Query: 109 GIENG--TQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
           G+         T+  C+          E +++ ++  F
Sbjct: 140 GLARLQKAHIETMICCN---------LENKAKDLLLPF 168


>gi|257485936|ref|ZP_05639977.1| hypothetical protein PsyrptA_21886 [Pseudomonas syringae pv. tabaci
           ATCC 11528]
 gi|331010340|gb|EGH90396.1| hypothetical protein PSYTB_11723 [Pseudomonas syringae pv. tabaci
           ATCC 11528]
          Length = 598

 Score = 43.4 bits (102), Expect = 0.010,   Method: Composition-based stats.
 Identities = 16/76 (21%), Positives = 31/76 (40%), Gaps = 7/76 (9%)

Query: 33  NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISL 92
            N+I         ++   + HAE  A     +   Q++     L+ T  PC +CA     
Sbjct: 446 QNEIEGE----KNQVHTRSLHAEENAFLQISKHGGQKV-SGGILFTTASPCELCAKKAYQ 500

Query: 93  ARIRRLYYGASNPKGG 108
             I+++++   +P  G
Sbjct: 501 LGIKKIFF--IDPYPG 514


>gi|251778313|ref|ZP_04821233.1| dCMP deaminase [Clostridium botulinum E1 str. 'BoNT E Beluga']
 gi|243082628|gb|EES48518.1| dCMP deaminase [Clostridium botulinum E1 str. 'BoNT E Beluga']
          Length = 164

 Score = 43.4 bits (102), Expect = 0.010,   Method: Composition-based stats.
 Identities = 21/110 (19%), Positives = 32/110 (29%), Gaps = 40/110 (36%)

Query: 27  GAVAVLNNKIIS-------RAGNRNRELKDVTA-----------------HAEILAIRMG 62
           G++ V N++IIS       R  N   ++                      H+E  AI   
Sbjct: 29  GSIIVKNDEIISTGYTGAPRGRNNCIDINSCIREKLQVPRGTHYELCRSVHSEANAIISA 88

Query: 63  CRILSQEILPEVDLYVTLE------------PCTMCAAAISLARIRRLYY 100
            R      +    LY+                C+MC   I  A I  +  
Sbjct: 89  SRR----DMIGATLYLVGRDAKTREYVENANSCSMCKRLIINAGISYVVI 134


>gi|114649630|ref|XP_001153214.1| PREDICTED: hypothetical protein LOC467357 isoform 2 [Pan
           troglodytes]
          Length = 469

 Score = 43.4 bits (102), Expect = 0.011,   Method: Composition-based stats.
 Identities = 22/77 (28%), Positives = 34/77 (44%), Gaps = 11/77 (14%)

Query: 29  VAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAA 88
           V V N KI+      + +L     HA  +A+     I     L   DLY + +PC+ C  
Sbjct: 46  VVVKNMKIVGL-HCSSEDL-----HAGQIAL-----IKHGSRLKNCDLYFSRKPCSACLK 94

Query: 89  AISLARIRRLYYGASNP 105
            I  A + R+ Y  ++P
Sbjct: 95  MIVNAGVNRISYWPADP 111


>gi|81674341|gb|AAI09774.1| CDADC1 protein [Bos taurus]
          Length = 248

 Score = 43.4 bits (102), Expect = 0.011,   Method: Composition-based stats.
 Identities = 22/77 (28%), Positives = 34/77 (44%), Gaps = 11/77 (14%)

Query: 29  VAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAA 88
           V V N KI+      + +L     HA  +A+     I     L   DLY + +PC+ C  
Sbjct: 92  VVVKNMKIVGL-HCSSEDL-----HAGKIAL-----IKHGSKLKNCDLYFSRKPCSACLK 140

Query: 89  AISLARIRRLYYGASNP 105
            I  A + R+ Y  ++P
Sbjct: 141 MIVNAGVNRISYWPADP 157


>gi|119629220|gb|EAX08815.1| cytidine and dCMP deaminase domain containing 1, isoform CRA_a
           [Homo sapiens]
          Length = 492

 Score = 43.4 bits (102), Expect = 0.011,   Method: Composition-based stats.
 Identities = 22/77 (28%), Positives = 34/77 (44%), Gaps = 11/77 (14%)

Query: 29  VAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAA 88
           V V N KI+      + +L     HA  +A+     I     L   DLY + +PC+ C  
Sbjct: 46  VVVKNMKIVGL-HCSSEDL-----HAGQIAL-----IKHGSRLKNCDLYFSRKPCSACLK 94

Query: 89  AISLARIRRLYYGASNP 105
            I  A + R+ Y  ++P
Sbjct: 95  MIVNAGVNRISYWPADP 111


>gi|331248562|ref|XP_003336904.1| hypothetical protein PGTG_18310 [Puccinia graminis f. sp. tritici
           CRL 75-36-700-3]
 gi|309315894|gb|EFP92485.1| hypothetical protein PGTG_18310 [Puccinia graminis f. sp. tritici
           CRL 75-36-700-3]
          Length = 327

 Score = 43.4 bits (102), Expect = 0.012,   Method: Composition-based stats.
 Identities = 20/89 (22%), Positives = 32/89 (35%), Gaps = 23/89 (25%)

Query: 26  VGAVAVL-NNKIISRAGNRN-RELKDVTA------------HAEILAIRMGCRILSQEIL 71
           VGAV V  + +++S   N   R +  V A            HAE  A+    R    + +
Sbjct: 223 VGAVLVTVDKRVLSTGYNGTPRGMHTVVAGCGVNLEECLCLHAEENALLEAGR----DRI 278

Query: 72  PEVDLYVTLEPCTMCAAAISLARIRRLYY 100
               LY     C   +  I    ++ + Y
Sbjct: 279 TNSTLY-----CNTGSIKIVQCGVKEVIY 302


>gi|171914203|ref|ZP_02929673.1| deoxycytidylate deaminase [Verrucomicrobium spinosum DSM 4136]
          Length = 162

 Score = 43.0 bits (101), Expect = 0.013,   Method: Composition-based stats.
 Identities = 29/108 (26%), Positives = 44/108 (40%), Gaps = 24/108 (22%)

Query: 11  ALEEAQNAALRNEIP---VGAVAVL-NNKIISRAGNRNRE----------LKDVTA---- 52
           A+  A  A+LR+E P   VGAVA   +N++I  A N               +D+      
Sbjct: 23  AMALAHVASLRSEDPYRKVGAVAFDFDNRVIGTAYNGLAPGFNADHEFWLDRDIRRKFML 82

Query: 53  HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
           HAE+              L       T +PCT CA  ++   ++ +YY
Sbjct: 83  HAEVNL--CSLFTRGTVKLVAC----TTKPCTSCAQMLAAYGVKEIYY 124


>gi|116331682|ref|YP_801400.1| pyrimidine deaminase, riboflavin biosynthesis [Leptospira
           borgpetersenii serovar Hardjo-bovis JB197]
 gi|116125371|gb|ABJ76642.1| Pyrimidine deaminase, riboflavin biosynthesis [Leptospira
           borgpetersenii serovar Hardjo-bovis JB197]
          Length = 432

 Score = 43.0 bits (101), Expect = 0.014,   Method: Composition-based stats.
 Identities = 24/93 (25%), Positives = 36/93 (38%), Gaps = 20/93 (21%)

Query: 25  PVGAVA--VLNNKIISRAGNRNRELKDVTA--HAEILAIRMGCRILSQEILPE-VDLYVT 79
           PV  +   V N +I+++           T   HAE  A       +      E  +++VT
Sbjct: 28  PVSCLITDVDNARILAKGR------TSPTGGPHAERNA---YYEFVKNGFFKEPHNVWVT 78

Query: 80  LEPC------TMCAAAISLARIRRLYYGASNPK 106
           LEPC        C   I   + + LYYG  +P 
Sbjct: 79  LEPCTHSGKTPPCLDLILEHKPKTLYYGRKDPN 111


>gi|118445010|ref|YP_879007.1| cytidine and deoxycytidylate deaminase family protein [Clostridium
           novyi NT]
 gi|118135466|gb|ABK62510.1| Cytidine and deoxycytidylate deaminase family protein [Clostridium
           novyi NT]
          Length = 162

 Score = 43.0 bits (101), Expect = 0.014,   Method: Composition-based stats.
 Identities = 29/111 (26%), Positives = 37/111 (33%), Gaps = 40/111 (36%)

Query: 26  VGAVAVLNNKIISRAG--------N-------RNRELK--DVTA-------HAEILAIRM 61
            GA+ V N++IIS           N       R  EL     T        HAE  AI  
Sbjct: 28  FGAIIVKNDEIISSGYTGAPRGRKNCSDLKRCRREELNVERGTRYELCRSVHAEQNAIIS 87

Query: 62  GCRILSQEILPEVDLYV------TLE------PCTMCAAAISLARIRRLYY 100
             R      L    LY+      T E      PC++C   I  A I ++  
Sbjct: 88  ARRQDM---LNG-VLYLVGKEVATGELVKNAAPCSLCKRFIINAGISKVII 134


>gi|317138553|ref|XP_003189058.1| DRAP deaminase [Aspergillus oryzae RIB40]
          Length = 179

 Score = 43.0 bits (101), Expect = 0.014,   Method: Composition-based stats.
 Identities = 39/163 (23%), Positives = 59/163 (36%), Gaps = 37/163 (22%)

Query: 3   KGNVFMSCALEEAQNAALRNEIP------VGAVAVLN--NKIISRAGNRNR---ELKDV- 50
               +M CALE+A+ +      P      VGAV V    N+I+S   +         D  
Sbjct: 14  DHKGYMECALEKARLS-----PPSPTKFCVGAVLVDADRNEILSTGYSMELPGDRPGDPG 68

Query: 51  TAHAEILA-IRMGCRILSQ-----EILP-EVDLYVTLEPCT-------MCAAAI--SLAR 94
             HAE    I++  +         E+LP    LY T+EPC+        C   I    + 
Sbjct: 69  NTHAEQCCFIKVADQHNVPEAELVEVLPRNTVLYTTMEPCSRRLSGNRTCVQRILGLASS 128

Query: 95  IRRLYYGASNPK-GGGIENGTQFYTLATCHHSPEIYPGISEQR 136
           ++ +Y G + P+       G +    A          G  E R
Sbjct: 129 LKVVYVGITEPETFIADNTGRKILEDAGV--QVICVEG-MEDR 168


>gi|148704181|gb|EDL36128.1| mCG13855, isoform CRA_d [Mus musculus]
          Length = 339

 Score = 43.0 bits (101), Expect = 0.014,   Method: Composition-based stats.
 Identities = 21/77 (27%), Positives = 29/77 (37%), Gaps = 11/77 (14%)

Query: 29  VAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAA 88
           V V N KII      + +L                 I     L   DLY + +PC+ C  
Sbjct: 92  VVVKNMKIIGL-HCSSEDLHTG----------QIALIKHGSRLKNCDLYFSRKPCSACLK 140

Query: 89  AISLARIRRLYYGASNP 105
            I  A + R+ Y  S+P
Sbjct: 141 MIVNAGVNRISYWPSDP 157


>gi|58865884|ref|NP_001012156.1| cytidine and dCMP deaminase domain containing 1 [Rattus norvegicus]
 gi|53733530|gb|AAH83736.1| Cytidine and dCMP deaminase domain containing 1 [Rattus norvegicus]
 gi|149030188|gb|EDL85244.1| rCG52125, isoform CRA_d [Rattus norvegicus]
          Length = 339

 Score = 43.0 bits (101), Expect = 0.014,   Method: Composition-based stats.
 Identities = 21/77 (27%), Positives = 29/77 (37%), Gaps = 11/77 (14%)

Query: 29  VAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAA 88
           V V N KII      + +L                 I     L   DLY + +PC+ C  
Sbjct: 92  VVVKNMKIIGL-HCSSEDLHTG----------QIALIKHGSRLKNCDLYFSRKPCSACLK 140

Query: 89  AISLARIRRLYYGASNP 105
            I  A + R+ Y  S+P
Sbjct: 141 MIVNAGVNRISYWPSDP 157


>gi|317178213|dbj|BAJ56002.1| riboflavin biosynthesis protein [Helicobacter pylori F16]
          Length = 344

 Score = 43.0 bits (101), Expect = 0.014,   Method: Composition-based stats.
 Identities = 30/148 (20%), Positives = 47/148 (31%), Gaps = 45/148 (30%)

Query: 1   MKKGNVFMSCALEEAQN----AALRNEIP-VGA-VAVLNNKIISRAGNRNRELKDVTAHA 54
           MK     +   L +A      A      P V   V   N++I+S         K  T HA
Sbjct: 1   MKLYESLLEICLNKAWEHQTLALEN---PSVACMVLDKNHEILS----LETHKKAKTPHA 53

Query: 55  EILAIRMGCRIL------------------------SQEILPEVDLYVTLEPC------T 84
           E+LA +   +IL                              +    +TLEPC       
Sbjct: 54  EVLAAKSALKILRPSLKNDLEKLEDPKTLSDFLKTHHDSAFKDCVFLITLEPCNSYGKTP 113

Query: 85  MCAAAISLARIRRLYYGAS--NPKGGGI 110
            C+  + + + +R+         K GG+
Sbjct: 114 ACSGLLEVLKPKRVVIATEENEAKKGGL 141


>gi|24213844|ref|NP_711325.1| pyrimidine deaminase, riboflavin biosynthesis [Leptospira
           interrogans serovar Lai str. 56601]
 gi|45658378|ref|YP_002464.1| hypothetical protein LIC12536 [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|24194684|gb|AAN48343.1| pyrimidine deaminase, riboflavin biosynthesis [Leptospira
           interrogans serovar Lai str. 56601]
 gi|45601621|gb|AAS71101.1| RibD [Leptospira interrogans serovar Copenhageni str. Fiocruz
           L1-130]
          Length = 466

 Score = 43.0 bits (101), Expect = 0.014,   Method: Composition-based stats.
 Identities = 23/93 (24%), Positives = 37/93 (39%), Gaps = 20/93 (21%)

Query: 25  PVGAVA--VLNNKIISRAGNRNRELKDVTA--HAEILAIRMGCRILSQEILPE-VDLYVT 79
           PV  +   V N +I ++           T   HAE  A       ++  +L +  +++VT
Sbjct: 28  PVSCLITDVENKRIFAKGR------TSPTGGPHAERNA---YYEFINNGLLSKPHNVWVT 78

Query: 80  LEPC------TMCAAAISLARIRRLYYGASNPK 106
            EPC        C   I   + + LYYG  +P 
Sbjct: 79  FEPCTHHGKTPPCLDLILEHKPKTLYYGLKDPN 111


>gi|208435372|ref|YP_002267038.1| riboflavin biosynthesis protein [Helicobacter pylori G27]
 gi|208433301|gb|ACI28172.1| riboflavin biosynthesis protein [Helicobacter pylori G27]
          Length = 344

 Score = 43.0 bits (101), Expect = 0.015,   Method: Composition-based stats.
 Identities = 30/148 (20%), Positives = 48/148 (32%), Gaps = 45/148 (30%)

Query: 1   MKKGNVFMSCALEEAQN----AALRNEIP-VGA-VAVLNNKIISRAGNRNRELKDVTAHA 54
           M+     +   L +A      A      P V   V   N++I+S         K  T HA
Sbjct: 1   MRLYESLLEICLNKAWEYQTLALEN---PSVACMVLDKNHEILS----LETHKKAKTPHA 53

Query: 55  EILAIRMGCRIL------------------------SQEILPEVDLYVTLEPC------T 84
           E+LA +   +IL                              +    +TLEPC       
Sbjct: 54  EVLAAKSALKILRPHLKSDLEKLEDPKTLSDFLKTHHDNAFKDCVFLITLEPCNSYGKTP 113

Query: 85  MCAAAISLARIRRLYYGAS--NPKGGGI 110
            C+  + + + +R+   A     K GG+
Sbjct: 114 ACSGLLEILKPKRVVIAAEENEAKKGGL 141


>gi|229163274|ref|ZP_04291228.1| Deoxycytidylate deaminase [Bacillus cereus R309803]
 gi|228620181|gb|EEK77053.1| Deoxycytidylate deaminase [Bacillus cereus R309803]
          Length = 69

 Score = 43.0 bits (101), Expect = 0.016,   Method: Composition-based stats.
 Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 4/48 (8%)

Query: 53  HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
           HAE  ++    R      L     YVT EPC  CA  ++ A I R+ +
Sbjct: 2   HAEENSVLHAERA----DLKGATAYVTHEPCEKCAKTLAQAGIIRIIF 45


>gi|119492758|ref|XP_001263698.1| cytidine and deoxycytidylate deaminase zinc-binding domain protein
           [Neosartorya fischeri NRRL 181]
 gi|119411858|gb|EAW21801.1| cytidine and deoxycytidylate deaminase zinc-binding domain protein
           [Neosartorya fischeri NRRL 181]
          Length = 161

 Score = 43.0 bits (101), Expect = 0.016,   Method: Composition-based stats.
 Identities = 33/127 (25%), Positives = 47/127 (37%), Gaps = 31/127 (24%)

Query: 8   MSCALEEAQNAALRNEIP----VGAVAVL--NNKIISRAGNRNRELKDVTA-----HAEI 56
           M  ALE+A+ +      P    VGAV V    N+I+S   +      D  A     HAE 
Sbjct: 1   MQYALEKARLSPPA---PTKFCVGAVLVDADKNEILSTGYSM-ELPGDRPADPGNTHAEQ 56

Query: 57  LA-IRMGCRILSQEILPE------VDLYVTLEPCT-------MCAAAISLAR--IRRLYY 100
              I++  R    E            LY T+EPC         C   I   +  ++ +Y 
Sbjct: 57  CCFIKVAERHNIPEDRLGEVLPKNTVLYTTMEPCNERLSGNRTCVDRILSLKGAVKVVYV 116

Query: 101 GASNPKG 107
           G   P+ 
Sbjct: 117 GIKEPET 123


>gi|291541627|emb|CBL14737.1| Deoxycytidylate deaminase [Ruminococcus bromii L2-63]
          Length = 162

 Score = 42.6 bits (100), Expect = 0.016,   Method: Composition-based stats.
 Identities = 24/118 (20%), Positives = 38/118 (32%), Gaps = 42/118 (35%)

Query: 26  VGAVAVLNNKIISRAG--------NRN------RELKDVTA----------HAEILAIRM 61
            GA+ V N++I+S           N        R+ +++            HAE  AI  
Sbjct: 28  FGAIIVNNDQIVSTGYTGAPRGRKNCCDLGFCIRQERNIPRGERYELCRSVHAEANAIIH 87

Query: 62  GCRILSQEILPEVDLYVTLE------------PCTMCAAAISLARIRRLYYGASNPKG 107
             R    E +    LY+  +             C MC   +  A I ++     N K 
Sbjct: 88  ASR----EQMIGATLYLVGKEMSNGEYVQNTSSCAMCKRMVINAGIDKVI--VRNDKT 139


>gi|187734848|ref|YP_001876960.1| CMP/dCMP deaminase zinc-binding [Akkermansia muciniphila ATCC
           BAA-835]
 gi|187424900|gb|ACD04179.1| CMP/dCMP deaminase zinc-binding [Akkermansia muciniphila ATCC
           BAA-835]
          Length = 155

 Score = 42.6 bits (100), Expect = 0.016,   Method: Composition-based stats.
 Identities = 30/115 (26%), Positives = 41/115 (35%), Gaps = 26/115 (22%)

Query: 14  EAQNAALRNEIP---VGAV-AVLNNKIISRAGN--------------RNRELKDVTAHAE 55
            A  AALR+E P   VGA     +N++I  A N                 E +    HAE
Sbjct: 19  LAHAAALRSEDPYRKVGAAALDADNRVIGTAYNGLYPGFKAQDTFWASREERQKYMLHAE 78

Query: 56  ILAIRMGCRILSQEILPEV-DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109
           I        + S     E   +  T  PCT C  A+    ++ +YY     K   
Sbjct: 79  IN-------LCSLFRRGEAKVVACTTMPCTSCMQALCAHGVKTIYYCEPYDKSEA 126


>gi|115399680|ref|XP_001215445.1| hypothetical protein ATEG_06267 [Aspergillus terreus NIH2624]
 gi|114191111|gb|EAU32811.1| hypothetical protein ATEG_06267 [Aspergillus terreus NIH2624]
          Length = 193

 Score = 42.6 bits (100), Expect = 0.016,   Method: Composition-based stats.
 Identities = 20/106 (18%), Positives = 34/106 (32%), Gaps = 27/106 (25%)

Query: 46  ELKDVTAHAEILAIRMGCRILSQEI--LPEVDLYVTLEPCTMCAAAISLARIRRLYYGAS 103
           E      H E   ++    I + +   + +     T EPC++C +AI  +      Y   
Sbjct: 36  ERGSPLWHGETWTLKQFFEIPADQRPPVQDCLFLTTHEPCSLCLSAILWSGFDNFIY--- 92

Query: 104 NPKGGGIENGTQFYTLATCHHSPEIYP---------GISE-QRSRQ 139
                        YT    HH  E +           + E + +RQ
Sbjct: 93  ------------MYTYEETHHIFECHGDLDIFNDVFNVREGEEARQ 126


>gi|222035894|emb|CAP78639.1| hypothetical protein LF82_690 [Escherichia coli LF82]
 gi|312948765|gb|ADR29592.1| CMP/dCMP deaminase, zinc-binding protein [Escherichia coli O83:H1
           str. NRG 857C]
          Length = 586

 Score = 42.6 bits (100), Expect = 0.016,   Method: Composition-based stats.
 Identities = 17/68 (25%), Positives = 25/68 (36%), Gaps = 6/68 (8%)

Query: 41  GNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
           GN+       + HAE  A     +      +    LY T  PC +CA       I+ + Y
Sbjct: 479 GNQVHTR---SLHAEENAFLQLSK-YGSVGIEGGRLYTTASPCELCAKKAYQLGIKEIIY 534

Query: 101 GASNPKGG 108
              +P  G
Sbjct: 535 --IDPYPG 540


>gi|332535944|ref|ZP_08411646.1| deoxycytidylate deaminase [Pseudoalteromonas haloplanktis ANT/505]
 gi|332034678|gb|EGI71231.1| deoxycytidylate deaminase [Pseudoalteromonas haloplanktis ANT/505]
          Length = 553

 Score = 42.6 bits (100), Expect = 0.017,   Method: Composition-based stats.
 Identities = 15/64 (23%), Positives = 26/64 (40%), Gaps = 3/64 (4%)

Query: 45  RELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASN 104
            ++   + HAE  A     +      +    L+ T  PC +CA       ++R+YY   +
Sbjct: 445 NQVHTRSLHAEENAFLQMSK-DGGSGINGGFLFTTASPCELCAKKAYQLGMKRIYY--ID 501

Query: 105 PKGG 108
           P  G
Sbjct: 502 PYPG 505


>gi|261417416|ref|YP_003251099.1| CMP/dCMP deaminase zinc-binding protein [Fibrobacter succinogenes
           subsp. succinogenes S85]
 gi|261373872|gb|ACX76617.1| CMP/dCMP deaminase zinc-binding protein [Fibrobacter succinogenes
           subsp. succinogenes S85]
 gi|302326345|gb|ADL25546.1| putative deoxycytidylate deaminase [Fibrobacter succinogenes subsp.
           succinogenes S85]
          Length = 185

 Score = 42.6 bits (100), Expect = 0.017,   Method: Composition-based stats.
 Identities = 31/137 (22%), Positives = 50/137 (36%), Gaps = 47/137 (34%)

Query: 3   KGNVF--MSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNR------------NREL 47
           +  V+  M CA  +A+ +  +N   +GAV V  + ++IS   N              RE 
Sbjct: 9   RDEVYTQMMCA--QARLSKDQN-TQMGAVLVSADGRVISTGYNGAPAGFDDETVPYTREK 65

Query: 48  K-------DVTA------------------HAEILAIRMGCRILSQEILPEVDLYVTLEP 82
           +       D  +                  HAEI A+      +     P   LYV   P
Sbjct: 66  QLLAYDLLDADSGELLSHHEFEANKYPFMVHAEINALHYARGKVP----PGSKLYVIGFP 121

Query: 83  CTMCAAAISLARIRRLY 99
           C  C+  ISL+ +  ++
Sbjct: 122 CERCSLDISLSGVAEVF 138


>gi|239790227|dbj|BAH71687.1| ACYPI001679 [Acyrthosiphon pisum]
          Length = 100

 Score = 42.6 bits (100), Expect = 0.017,   Method: Composition-based stats.
 Identities = 10/40 (25%), Positives = 16/40 (40%)

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
                 +   +    +YV L PC  CA  I  + I+ + Y
Sbjct: 2   NAVLNKNSMDVRNCTIYVALFPCNECAKIIIQSGIKEVVY 41


>gi|308183608|ref|YP_003927735.1| riboflavin biosynthesis protein (ribG) [Helicobacter pylori PeCan4]
 gi|308065793|gb|ADO07685.1| riboflavin biosynthesis protein (ribG) [Helicobacter pylori PeCan4]
          Length = 344

 Score = 42.6 bits (100), Expect = 0.017,   Method: Composition-based stats.
 Identities = 30/148 (20%), Positives = 47/148 (31%), Gaps = 45/148 (30%)

Query: 1   MKKGNVFMSCALEEAQN----AALRNEIP-VGA-VAVLNNKIISRAGNRNRELKDVTAHA 54
           MK     +   L +A      A      P V   V   N++I+S         K  T HA
Sbjct: 1   MKLYENLLEICLNKAWEHQTLALEN---PSVACMVLDKNHEILS----LETHKKAKTPHA 53

Query: 55  EILAIRMGCRIL------------------------SQEILPEVDLYVTLEPC------T 84
           E+LA +   +IL                              +    +TLEPC       
Sbjct: 54  EVLAAQSALKILRPSLKNDLEKLEDPKILSDFLKTHHNNAFKDCVFLITLEPCNSYGKTP 113

Query: 85  MCAAAISLARIRRLYYGAS--NPKGGGI 110
            C+  + + + +R+         K GG+
Sbjct: 114 ACSGLLEILKPKRVVIATEENEAKKGGL 141


>gi|46115356|ref|XP_383696.1| hypothetical protein FG03520.1 [Gibberella zeae PH-1]
          Length = 219

 Score = 42.6 bits (100), Expect = 0.017,   Method: Composition-based stats.
 Identities = 15/69 (21%), Positives = 24/69 (34%), Gaps = 12/69 (17%)

Query: 43  RNRELKD----VTAHAEILAIRMG-------CRILSQEILPEVDLYVTLEPCTMCAAAIS 91
                 D       H EI  I+          +        E   + T EPC++C + I+
Sbjct: 49  LTVSTNDERVSPLLHGEINCIQTFYMKTFPDPKTRPNPR-EECIFFATHEPCSLCLSGIT 107

Query: 92  LARIRRLYY 100
            +  + LYY
Sbjct: 108 WSGFKELYY 116


>gi|26333075|dbj|BAC30255.1| unnamed protein product [Mus musculus]
          Length = 497

 Score = 42.6 bits (100), Expect = 0.017,   Method: Composition-based stats.
 Identities = 21/77 (27%), Positives = 29/77 (37%), Gaps = 11/77 (14%)

Query: 29  VAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAA 88
           V V N KII      + +L                 I     L   DLY + +PC+ C  
Sbjct: 92  VVVKNMKIIGL-HCSSEDLHTG----------QIALIKHGSRLKNCDLYFSRKPCSACLK 140

Query: 89  AISLARIRRLYYGASNP 105
            I  A + R+ Y  S+P
Sbjct: 141 MIVNAGVNRISYWPSDP 157


>gi|294635297|ref|ZP_06713796.1| riboflavin biosynthesis protein RibD [Edwardsiella tarda ATCC
          23685]
 gi|291091331|gb|EFE23892.1| riboflavin biosynthesis protein RibD [Edwardsiella tarda ATCC
          23685]
          Length = 46

 Score = 42.6 bits (100), Expect = 0.017,   Method: Composition-based stats.
 Identities = 9/40 (22%), Positives = 16/40 (40%), Gaps = 2/40 (5%)

Query: 4  GNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAG 41
             +++ A E A+         P VG V V + +I+    
Sbjct: 7  DEFYLARAFELARRGRFTTTPNPNVGCVLVRDGQIVGEGF 46


>gi|148704184|gb|EDL36131.1| mCG13855, isoform CRA_g [Mus musculus]
          Length = 510

 Score = 42.6 bits (100), Expect = 0.017,   Method: Composition-based stats.
 Identities = 21/77 (27%), Positives = 29/77 (37%), Gaps = 11/77 (14%)

Query: 29  VAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAA 88
           V V N KII      + +L                 I     L   DLY + +PC+ C  
Sbjct: 105 VVVKNMKIIGL-HCSSEDLHTG----------QIALIKHGSRLKNCDLYFSRKPCSACLK 153

Query: 89  AISLARIRRLYYGASNP 105
            I  A + R+ Y  S+P
Sbjct: 154 MIVNAGVNRISYWPSDP 170


>gi|270483872|ref|NP_001162010.1| cytidine and dCMP deaminase domain-containing protein 1 isoform 5
           [Mus musculus]
          Length = 497

 Score = 42.6 bits (100), Expect = 0.018,   Method: Composition-based stats.
 Identities = 21/77 (27%), Positives = 29/77 (37%), Gaps = 11/77 (14%)

Query: 29  VAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAA 88
           V V N KII      + +L                 I     L   DLY + +PC+ C  
Sbjct: 92  VVVKNMKIIGL-HCSSEDLHTG----------QIALIKHGSRLKNCDLYFSRKPCSACLK 140

Query: 89  AISLARIRRLYYGASNP 105
            I  A + R+ Y  S+P
Sbjct: 141 MIVNAGVNRISYWPSDP 157


>gi|332674278|gb|AEE71095.1| riboflavin biosynthesis protein RibD [Helicobacter pylori 83]
          Length = 344

 Score = 42.6 bits (100), Expect = 0.018,   Method: Composition-based stats.
 Identities = 33/182 (18%), Positives = 56/182 (30%), Gaps = 52/182 (28%)

Query: 1   MKKGNVFMSCALEEAQN----AALRNEIP-VGA-VAVLNNKIISRAGNRNRELKDVTAHA 54
           M+     +   L +A      A      P V   V   N++I+S         K  T HA
Sbjct: 1   MRLYESLLEICLNKAWEHQTLALEN---PSVACMVLDKNHEILS----LETHKKAKTPHA 53

Query: 55  EILAIRMGCRIL------------------------SQEILPEVDLYVTLEPC------T 84
           E+LA +   +IL                              +    +TLEPC       
Sbjct: 54  EVLAAKSALKILRPSLKNDLEKLEDPKTLSDFLKTHHNNAFKDCVFLITLEPCNSYGKTP 113

Query: 85  MCAAAISLARIRRLYYGAS--NPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQ 142
            C+  + + + +R+         K GG         L        +  G  E +++ ++ 
Sbjct: 114 ACSGLLEILKPKRVVIATEENEAKKGG------LARLKKARIDGVVCEG-LENKAKDLLL 166

Query: 143 DF 144
            F
Sbjct: 167 PF 168


>gi|270483868|ref|NP_001162008.1| cytidine and dCMP deaminase domain-containing protein 1 isoform 3
           [Mus musculus]
 gi|148704178|gb|EDL36125.1| mCG13855, isoform CRA_a [Mus musculus]
          Length = 500

 Score = 42.6 bits (100), Expect = 0.018,   Method: Composition-based stats.
 Identities = 21/77 (27%), Positives = 29/77 (37%), Gaps = 11/77 (14%)

Query: 29  VAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAA 88
           V V N KII      + +L                 I     L   DLY + +PC+ C  
Sbjct: 92  VVVKNMKIIGL-HCSSEDLHTG----------QIALIKHGSRLKNCDLYFSRKPCSACLK 140

Query: 89  AISLARIRRLYYGASNP 105
            I  A + R+ Y  S+P
Sbjct: 141 MIVNAGVNRISYWPSDP 157


>gi|148704183|gb|EDL36130.1| mCG13855, isoform CRA_f [Mus musculus]
          Length = 536

 Score = 42.6 bits (100), Expect = 0.019,   Method: Composition-based stats.
 Identities = 21/77 (27%), Positives = 29/77 (37%), Gaps = 11/77 (14%)

Query: 29  VAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAA 88
           V V N KII      + +L                 I     L   DLY + +PC+ C  
Sbjct: 105 VVVKNMKIIGL-HCSSEDLHTG----------QIALIKHGSRLKNCDLYFSRKPCSACLK 153

Query: 89  AISLARIRRLYYGASNP 105
            I  A + R+ Y  S+P
Sbjct: 154 MIVNAGVNRISYWPSDP 170


>gi|309774789|ref|ZP_07669811.1| cytidine/deoxycytidylate deaminase family protein
           [Erysipelotrichaceae bacterium 3_1_53]
 gi|308917474|gb|EFP63192.1| cytidine/deoxycytidylate deaminase family protein
           [Erysipelotrichaceae bacterium 3_1_53]
          Length = 165

 Score = 42.6 bits (100), Expect = 0.019,   Method: Composition-based stats.
 Identities = 30/135 (22%), Positives = 44/135 (32%), Gaps = 41/135 (30%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAG--------------NRNREL 47
            K N ++  A   AQ +  R     GAV V N++IIS                 +  RE 
Sbjct: 7   DKINYYLDIAGTVAQRSTCRR-RSYGAVIVKNDEIISTGYVGAPRGRTNCLDLNHCIREK 65

Query: 48  KDVTA----------HAEILAIRMGCRILSQEILPEVDLYVTLE------------PCTM 85
             +            HAE  AI        +  + + DL++                C+M
Sbjct: 66  LQIPRGERYELCRSVHAEANAIISA----QRSEMLDADLFLVGYEADSKELIQHSNSCSM 121

Query: 86  CAAAISLARIRRLYY 100
           C   I  A I R+  
Sbjct: 122 CKRMIINAGIARVII 136


>gi|148704182|gb|EDL36129.1| mCG13855, isoform CRA_e [Mus musculus]
          Length = 512

 Score = 42.6 bits (100), Expect = 0.019,   Method: Composition-based stats.
 Identities = 21/77 (27%), Positives = 29/77 (37%), Gaps = 11/77 (14%)

Query: 29  VAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAA 88
           V V N KII      + +L                 I     L   DLY + +PC+ C  
Sbjct: 105 VVVKNMKIIGL-HCSSEDLHTG----------QIALIKHGSRLKNCDLYFSRKPCSACLK 153

Query: 89  AISLARIRRLYYGASNP 105
            I  A + R+ Y  S+P
Sbjct: 154 MIVNAGVNRISYWPSDP 170


>gi|110625890|ref|NP_082262.1| cytidine and dCMP deaminase domain-containing protein 1 isoform 2
           [Mus musculus]
 gi|81874285|sp|Q8BMD5|CDAC1_MOUSE RecName: Full=Cytidine and dCMP deaminase domain-containing protein
           1
 gi|26328595|dbj|BAC28036.1| unnamed protein product [Mus musculus]
          Length = 523

 Score = 42.6 bits (100), Expect = 0.019,   Method: Composition-based stats.
 Identities = 21/77 (27%), Positives = 29/77 (37%), Gaps = 11/77 (14%)

Query: 29  VAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAA 88
           V V N KII      + +L                 I     L   DLY + +PC+ C  
Sbjct: 92  VVVKNMKIIGL-HCSSEDLHTG----------QIALIKHGSRLKNCDLYFSRKPCSACLK 140

Query: 89  AISLARIRRLYYGASNP 105
            I  A + R+ Y  S+P
Sbjct: 141 MIVNAGVNRISYWPSDP 157


>gi|26332907|dbj|BAC30171.1| unnamed protein product [Mus musculus]
          Length = 523

 Score = 42.6 bits (100), Expect = 0.019,   Method: Composition-based stats.
 Identities = 21/77 (27%), Positives = 29/77 (37%), Gaps = 11/77 (14%)

Query: 29  VAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAA 88
           V V N KII      + +L                 I     L   DLY + +PC+ C  
Sbjct: 92  VVVKNMKIIGL-HCSSEDLHTG----------QIALIKHGSRLKNCDLYFSRKPCSACLK 140

Query: 89  AISLARIRRLYYGASNP 105
            I  A + R+ Y  S+P
Sbjct: 141 MIVNAGVNRISYWPSDP 157


>gi|149030189|gb|EDL85245.1| rCG52125, isoform CRA_e [Rattus norvegicus]
          Length = 294

 Score = 42.6 bits (100), Expect = 0.019,   Method: Composition-based stats.
 Identities = 21/77 (27%), Positives = 29/77 (37%), Gaps = 11/77 (14%)

Query: 29  VAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAA 88
           V V N KII      + +L                 I     L   DLY + +PC+ C  
Sbjct: 47  VVVKNMKIIGL-HCSSEDLHTG----------QIALIKHGSRLKNCDLYFSRKPCSACLK 95

Query: 89  AISLARIRRLYYGASNP 105
            I  A + R+ Y  S+P
Sbjct: 96  MIVNAGVNRISYWPSDP 112


>gi|270483870|ref|NP_001162009.1| cytidine and dCMP deaminase domain-containing protein 1 isoform 4
           [Mus musculus]
 gi|13905210|gb|AAH06901.1| Cytidine and dCMP deaminase domain containing 1 [Mus musculus]
          Length = 499

 Score = 42.6 bits (100), Expect = 0.019,   Method: Composition-based stats.
 Identities = 21/77 (27%), Positives = 29/77 (37%), Gaps = 11/77 (14%)

Query: 29  VAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAA 88
           V V N KII      + +L                 I     L   DLY + +PC+ C  
Sbjct: 92  VVVKNMKIIGL-HCSSEDLHTG----------QIALIKHGSRLKNCDLYFSRKPCSACLK 140

Query: 89  AISLARIRRLYYGASNP 105
            I  A + R+ Y  S+P
Sbjct: 141 MIVNAGVNRISYWPSDP 157


>gi|282599435|ref|YP_003358325.1| hypothetical protein PP-LUZ7_gp043 [Pseudomonas phage LUZ7]
 gi|259048534|emb|CAZ66184.1| hypothetical protein [Pseudomonas phage LUZ7]
          Length = 192

 Score = 42.6 bits (100), Expect = 0.019,   Method: Composition-based stats.
 Identities = 26/120 (21%), Positives = 38/120 (31%), Gaps = 23/120 (19%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGN------------------ 42
           MK  +++MS A   A  +       VG V V     +    N                  
Sbjct: 32  MKYRDLYMSIARNAANQSVALRHK-VGGVLVTRTGALFTGWNGTLPGSDNCCERGPWMDT 90

Query: 43  --RNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
             R+R       HAE   +    R      L    L++T  PC  CA  +    +  L+Y
Sbjct: 91  EQRHRTTPHGVIHAEHNILAWASRSGVP--LEGSHLWITRSPCIKCAEMLVTHGVTALFY 148


>gi|66392081|ref|YP_239303.1| putative deoxycytidylate deaminase [Xanthomonas phage Xp15]
 gi|62529191|gb|AAX84874.1| putative deoxycytidylate deaminase [Xanthomonas phage Xp15]
          Length = 160

 Score = 42.6 bits (100), Expect = 0.019,   Method: Composition-based stats.
 Identities = 17/105 (16%), Positives = 31/105 (29%), Gaps = 27/105 (25%)

Query: 26  VGAVAVLN-NKIISRAGNR--NRELKDVTA-------------------HAEILAIRMGC 63
           VG + V + N +++   N          +                    HAE  A+    
Sbjct: 19  VGCILVDDLNHVLATGYNGTPRNVAHCGSHICPGMNASSGTQLDGCMATHAEQNALLQCM 78

Query: 64  RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGG 108
            +          +Y T +PC  C   +     + + Y  + P  G
Sbjct: 79  DVEKI-----HTVYCTTQPCLTCTKLLMNTGAKWIVYLDAYPNSG 118


>gi|270483864|ref|NP_001162007.1| cytidine and dCMP deaminase domain-containing protein 1 isoform 1
           [Mus musculus]
 gi|148704180|gb|EDL36127.1| mCG13855, isoform CRA_c [Mus musculus]
          Length = 525

 Score = 42.6 bits (100), Expect = 0.019,   Method: Composition-based stats.
 Identities = 21/77 (27%), Positives = 29/77 (37%), Gaps = 11/77 (14%)

Query: 29  VAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAA 88
           V V N KII      + +L                 I     L   DLY + +PC+ C  
Sbjct: 92  VVVKNMKIIGL-HCSSEDLHTG----------QIALIKHGSRLKNCDLYFSRKPCSACLK 140

Query: 89  AISLARIRRLYYGASNP 105
            I  A + R+ Y  S+P
Sbjct: 141 MIVNAGVNRISYWPSDP 157


>gi|15612463|ref|NP_224116.1| putative riboflavin-specific deaminase [Helicobacter pylori J99]
 gi|4156003|gb|AAD06964.1| putative RIBOFLAVIN-SPECIFIC DEAMINASE [Helicobacter pylori J99]
          Length = 344

 Score = 42.6 bits (100), Expect = 0.019,   Method: Composition-based stats.
 Identities = 33/182 (18%), Positives = 59/182 (32%), Gaps = 52/182 (28%)

Query: 1   MKKGNVFMSCALEEAQN----AALRNEIP-VGA-VAVLNNKIISRAGNRNRELKDVTAHA 54
           M+     +   L +A      A      P V   V   N++I+S         K  T HA
Sbjct: 1   MRLYESLLEICLNKAWEYQTLALEN---PSVACMVLDKNHEILS----LETHKKAKTPHA 53

Query: 55  EILAIRMGCRIL------------------------SQEILPEVDLYVTLEPC------T 84
           E+LA +   +IL                              +    +TLEPC       
Sbjct: 54  EVLAAKSALKILRPHLKSDLEKLEDPKILSDFLKTRHDNAFKDCVFLITLEPCNSYGKTP 113

Query: 85  MCAAAISLARIRRLYYGAS--NPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQ 142
            C+  + + + +R+         K GG+E   + +      H+        E +++ ++ 
Sbjct: 114 ACSGLLEILKPKRVIIATEENEAKKGGLERLQKAHIETIICHN-------LENKAKNLLL 166

Query: 143 DF 144
            F
Sbjct: 167 PF 168


>gi|315585891|gb|ADU40272.1| riboflavin biosynthesis protein RibD [Helicobacter pylori 35A]
          Length = 344

 Score = 42.6 bits (100), Expect = 0.020,   Method: Composition-based stats.
 Identities = 30/148 (20%), Positives = 47/148 (31%), Gaps = 45/148 (30%)

Query: 1   MKKGNVFMSCALEEAQN----AALRNEIP-VGA-VAVLNNKIISRAGNRNRELKDVTAHA 54
           MK     +   L +A      A      P V   V   N++I+S         K  T HA
Sbjct: 1   MKLYESLLEICLNKAWEHQTLALEN---PSVACMVLDKNHEILS----LETHKKAKTPHA 53

Query: 55  EILAIRMGCRIL------------------------SQEILPEVDLYVTLEPC------T 84
           E+LA +   +IL                              +    +TLEPC       
Sbjct: 54  EVLAAKSALKILRPGLKNDLEKLEDPKTLSDFLKTHHDNAFKDCVFLITLEPCNSYGKTP 113

Query: 85  MCAAAISLARIRRLYYGAS--NPKGGGI 110
            C+  + + + +R+         K GG+
Sbjct: 114 ACSGLLEILKPKRVVIATEENEAKKGGL 141


>gi|261840180|gb|ACX99945.1| riboflavin biosynthesis protein RibD [Helicobacter pylori 52]
          Length = 344

 Score = 42.6 bits (100), Expect = 0.020,   Method: Composition-based stats.
 Identities = 30/148 (20%), Positives = 47/148 (31%), Gaps = 45/148 (30%)

Query: 1   MKKGNVFMSCALEEAQN----AALRNEIP-VGA-VAVLNNKIISRAGNRNRELKDVTAHA 54
           MK     +   L +A      A      P V   V   N++I+S         K  T HA
Sbjct: 1   MKLYESLLEICLNKAWEHQTLALEN---PSVACMVLDKNHEILS----LETHKKAKTPHA 53

Query: 55  EILAIRMGCRIL------------------------SQEILPEVDLYVTLEPC------T 84
           E+LA +   +IL                              +    +TLEPC       
Sbjct: 54  EVLAAKSALKILRPSLKNDLEKLEDPKTLSDFLKTHHDNAFKDCVFLITLEPCNSYGKTP 113

Query: 85  MCAAAISLARIRRLYYGAS--NPKGGGI 110
            C+  + + + +R+         K GG+
Sbjct: 114 ACSGLLEILKPKRVVIATEENEAKKGGL 141


>gi|149030187|gb|EDL85243.1| rCG52125, isoform CRA_c [Rattus norvegicus]
          Length = 500

 Score = 42.6 bits (100), Expect = 0.020,   Method: Composition-based stats.
 Identities = 21/77 (27%), Positives = 29/77 (37%), Gaps = 11/77 (14%)

Query: 29  VAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAA 88
           V V N KII      + +L                 I     L   DLY + +PC+ C  
Sbjct: 92  VVVKNMKIIGL-HCSSEDLHTG----------QIALIKHGSRLKNCDLYFSRKPCSACLK 140

Query: 89  AISLARIRRLYYGASNP 105
            I  A + R+ Y  S+P
Sbjct: 141 MIVNAGVNRISYWPSDP 157



 Score = 34.1 bits (78), Expect = 6.7,   Method: Composition-based stats.
 Identities = 20/76 (26%), Positives = 31/76 (40%), Gaps = 3/76 (3%)

Query: 53  HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNP-KGGGIE 111
           HAE  A+   C+ +  E      ++VT  PC  C   I  A I+++Y G  +  K     
Sbjct: 399 HAEQNALTFRCQDIKPEERSM--IFVTKCPCDECVPLIKGAGIKQIYAGDVDVGKKKADI 456

Query: 112 NGTQFYTLATCHHSPE 127
           +  +F  L   H    
Sbjct: 457 SYMKFGELEGVHKFTW 472


>gi|289623948|ref|ZP_06456902.1| riboflavin biosynthesis protein RibD [Pseudomonas syringae pv.
           aesculi str. NCPPB3681]
          Length = 113

 Score = 42.6 bits (100), Expect = 0.020,   Method: Composition-based stats.
 Identities = 13/62 (20%), Positives = 23/62 (37%), Gaps = 4/62 (6%)

Query: 86  CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF 145
           CA A+  A + R+     +P       G     L   +    +  G+ E  +R + + F 
Sbjct: 1   CADALVNAGLARVVAAMQDPNPDVSGRGL----LRLMNAGIGVQCGVLESEARALNKGFL 56

Query: 146 KE 147
           K 
Sbjct: 57  KR 58


>gi|149030185|gb|EDL85241.1| rCG52125, isoform CRA_a [Rattus norvegicus]
          Length = 525

 Score = 42.6 bits (100), Expect = 0.020,   Method: Composition-based stats.
 Identities = 21/77 (27%), Positives = 29/77 (37%), Gaps = 11/77 (14%)

Query: 29  VAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAA 88
           V V N KII      + +L                 I     L   DLY + +PC+ C  
Sbjct: 92  VVVKNMKIIGL-HCSSEDLHTG----------QIALIKHGSRLKNCDLYFSRKPCSACLK 140

Query: 89  AISLARIRRLYYGASNP 105
            I  A + R+ Y  S+P
Sbjct: 141 MIVNAGVNRISYWPSDP 157



 Score = 34.1 bits (78), Expect = 6.9,   Method: Composition-based stats.
 Identities = 20/76 (26%), Positives = 31/76 (40%), Gaps = 3/76 (3%)

Query: 53  HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNP-KGGGIE 111
           HAE  A+   C+ +  E      ++VT  PC  C   I  A I+++Y G  +  K     
Sbjct: 399 HAEQNALTFRCQDIKPEERSM--IFVTKCPCDECVPLIKGAGIKQIYAGDVDVGKKKADI 456

Query: 112 NGTQFYTLATCHHSPE 127
           +  +F  L   H    
Sbjct: 457 SYMKFGELEGVHKFTW 472


>gi|197322456|ref|YP_002154729.1| putative cytidine deaminase [Feldmannia species virus]
 gi|197130523|gb|ACH46859.1| putative cytidine deaminase [Feldmannia species virus]
          Length = 121

 Score = 42.6 bits (100), Expect = 0.020,   Method: Composition-based stats.
 Identities = 18/84 (21%), Positives = 35/84 (41%), Gaps = 16/84 (19%)

Query: 27  GAVAVLNNKIISRAGNRNRELKDVTAHAEILA--------IRMGCRILSQE--ILPEVDL 76
           G++AV  + ++ +  NR       + HAE+ A        I  G R L      +    +
Sbjct: 27  GSIAVSGSSVVGKGSNRR------SLHAEVSAVKDTVKKKIGKGTRRLKVYVCRVSSAGM 80

Query: 77  YVTLEPCTMCAAAISLARIRRLYY 100
           ++   PC  C   +  A + ++Y+
Sbjct: 81  FMNSRPCAKCMRFMRDAGVSKVYF 104


>gi|207109478|ref|ZP_03243640.1| riboflavin biosynthesis protein (ribG) [Helicobacter pylori
           HPKX_438_CA4C1]
          Length = 146

 Score = 42.6 bits (100), Expect = 0.021,   Method: Composition-based stats.
 Identities = 27/143 (18%), Positives = 46/143 (32%), Gaps = 43/143 (30%)

Query: 1   MKKGNVFMSCALEEAQN----AALRNEIP-VGA-VAVLNNKIISRAGNRNRELKDVTAHA 54
           M+     +   L +A      A      P V   V   N++I+S         K  T+HA
Sbjct: 7   MRLYESLLEMCLNKAWEHQTLALEN---PSVACMVLDKNHEILS----LETHKKAKTSHA 59

Query: 55  EILAIRMGCRIL------------------------SQEILPEVDLYVTLEPC------T 84
           E+LA +   +IL                              +    +TLEPC       
Sbjct: 60  EVLAAKSALKILRPHLKSDLEKLEDPKTLSDFLKTHHDNAFKDCVFLITLEPCNSYGKTP 119

Query: 85  MCAAAISLARIRRLYYGASNPKG 107
            C+  + + + +R+   A   + 
Sbjct: 120 ACSGLLEILKPKRVVIAAEENEA 142


>gi|71023713|ref|XP_762086.1| hypothetical protein UM05939.1 [Ustilago maydis 521]
 gi|46101456|gb|EAK86689.1| hypothetical protein UM05939.1 [Ustilago maydis 521]
          Length = 224

 Score = 42.6 bits (100), Expect = 0.021,   Method: Composition-based stats.
 Identities = 16/85 (18%), Positives = 27/85 (31%), Gaps = 12/85 (14%)

Query: 26  VGAVAVLNNKI--ISRAGNRNRELKDVTAHAEILAIRM--------GCRILSQEILPEVD 75
            GA  +  + +  I    N          H EI  +            +   +    +  
Sbjct: 42  FGAAILSKSTLSPIVCCTNDEIT--SPLLHGEINTLLEFHKHNNALASKHEPRIDPKDCI 99

Query: 76  LYVTLEPCTMCAAAISLARIRRLYY 100
              T EPC++C +AI+       YY
Sbjct: 100 FLSTHEPCSLCLSAITWCGFDNFYY 124


>gi|148704179|gb|EDL36126.1| mCG13855, isoform CRA_b [Mus musculus]
          Length = 509

 Score = 42.6 bits (100), Expect = 0.021,   Method: Composition-based stats.
 Identities = 21/77 (27%), Positives = 29/77 (37%), Gaps = 11/77 (14%)

Query: 29  VAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAA 88
           V V N KII      + +L                 I     L   DLY + +PC+ C  
Sbjct: 78  VVVKNMKIIGL-HCSSEDLHTG----------QIALIKHGSRLKNCDLYFSRKPCSACLK 126

Query: 89  AISLARIRRLYYGASNP 105
            I  A + R+ Y  S+P
Sbjct: 127 MIVNAGVNRISYWPSDP 143


>gi|302407882|ref|XP_003001776.1| diaminohydroxyphosphoribosylamino-pyrimidine deaminase
           [Verticillium albo-atrum VaMs.102]
 gi|261359497|gb|EEY21925.1| diaminohydroxyphosphoribosylamino-pyrimidine deaminase
           [Verticillium albo-atrum VaMs.102]
          Length = 177

 Score = 42.2 bits (99), Expect = 0.021,   Method: Composition-based stats.
 Identities = 29/123 (23%), Positives = 39/123 (31%), Gaps = 23/123 (18%)

Query: 3   KGNVFMSCALEEAQNAA-LRNEIPVGAVAVLNNK--IISRAGNRNRELKDVTAHAEILAI 59
               ++  AL  A  +        VGAV V  N   I+S       E      HAE    
Sbjct: 17  DHKAYLQYALSLAARSPPKSTNYSVGAVLVNPNTNAIVSTGYTLELEGN---THAEQCCF 73

Query: 60  R--MGCRILSQEILPEVD------LYVTLEPC-------TMCAAAISLAR--IRRLYYGA 102
                   +++E L          LY T+EPC         C   I   +  I  +Y G 
Sbjct: 74  MKFAAAHSVTEEELATAVQSPPLILYATMEPCSERLSGNLPCVKRILRLKHLITAVYVGV 133

Query: 103 SNP 105
             P
Sbjct: 134 QEP 136


>gi|330688469|ref|NP_001193447.1| cytidine and dCMP deaminase domain-containing protein 1 [Bos
           taurus]
 gi|297469011|ref|XP_002706584.1| PREDICTED: cytidine and dCMP deaminase domain containing 1 [Bos
           taurus]
 gi|296481889|gb|DAA24004.1| cytidine and dCMP deaminase domain containing 1 [Bos taurus]
          Length = 515

 Score = 42.2 bits (99), Expect = 0.022,   Method: Composition-based stats.
 Identities = 22/77 (28%), Positives = 34/77 (44%), Gaps = 11/77 (14%)

Query: 29  VAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAA 88
           V V N KI+      + +L     HA  +A+     I     L   DLY + +PC+ C  
Sbjct: 92  VVVKNMKIVGL-HCSSEDL-----HAGKIAL-----IKHGSKLKNCDLYFSRKPCSACLK 140

Query: 89  AISLARIRRLYYGASNP 105
            I  A + R+ Y  ++P
Sbjct: 141 MIVNAGVNRISYWPADP 157



 Score = 33.7 bits (77), Expect = 8.3,   Method: Composition-based stats.
 Identities = 25/100 (25%), Positives = 41/100 (41%), Gaps = 20/100 (20%)

Query: 53  HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNP------- 105
           HAE  A+   C+ +  E      ++VT  PC  C   I  A I+++Y G  +        
Sbjct: 399 HAEQNALTFRCQEIKPEERSM--IFVTKCPCDECVPLIKGAGIKQIYAGDVDVGKKKADI 456

Query: 106 ---KGGGIENGTQFYTLATCHHSPEIYPGISEQ---RSRQ 139
              + G +E  ++F      + S     G+ EQ    SR+
Sbjct: 457 SYMRFGEVEGVSKFTWQ--LNPS---RTGVLEQNEPESRE 491


>gi|315453509|ref|YP_004073779.1| Riboflavin biosynthesis protein [Helicobacter felis ATCC 49179]
 gi|315132561|emb|CBY83189.1| Riboflavin biosynthesis protein, priboflavin-specific deaminase
           [Helicobacter felis ATCC 49179]
          Length = 343

 Score = 42.2 bits (99), Expect = 0.022,   Method: Composition-based stats.
 Identities = 20/82 (24%), Positives = 28/82 (34%), Gaps = 30/82 (36%)

Query: 51  TAHAEILAIRMGCRIL------------------------SQEILPEVDLYVTLEPC--- 83
           T HAE+ A+      L                          ++  E  L VTLEPC   
Sbjct: 48  TPHAEVRALAEAFNALSAVPFPKDIDPLDKQANYNFLAQNHSDLFKECTLLVTLEPCNHF 107

Query: 84  ---TMCAAAISLARIRRLYYGA 102
                CAA +   + +R+  GA
Sbjct: 108 GKTPPCAALLCALKPKRVIVGA 129


>gi|149194180|ref|ZP_01871278.1| Riboflavin biosynthesis protein RibD [Caminibacter mediatlanticus
           TB-2]
 gi|149136133|gb|EDM24611.1| Riboflavin biosynthesis protein RibD [Caminibacter mediatlanticus
           TB-2]
          Length = 326

 Score = 42.2 bits (99), Expect = 0.023,   Method: Composition-based stats.
 Identities = 32/158 (20%), Positives = 51/158 (32%), Gaps = 43/158 (27%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
           ++ +V +  A+ EA         P   VGA  V+ NK+   A       K  + HAE+  
Sbjct: 4   ERWDVLLDLAINEAWK-YQFLTYPNPAVGASLVIKNKVFVSAH-----KKAGSPHAEVNV 57

Query: 59  -------------------IRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLA 93
                              I             E +++VTLEPC        CA  + + 
Sbjct: 58  LWDAFSFFHKTPKFTDSFEIHEYLIKHHNNFFNEAEMFVTLEPCSHIGKTPSCANLLKVL 117

Query: 94  RIRRLYYGASNP---KGGGIENG------TQFYTLATC 122
           + + +  G  +P     GG+E                C
Sbjct: 118 KPKSVTIGIKDPIKSHSGGVEILKNAGIEVNLLNDKRC 155


>gi|157423356|gb|AAI53716.1| LOC100127602 protein [Xenopus (Silurana) tropicalis]
          Length = 483

 Score = 42.2 bits (99), Expect = 0.023,   Method: Composition-based stats.
 Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 11/79 (13%)

Query: 29  VAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAA 88
           V V N +II      + +L     HA  +A+     I     L + DLY + +PC++C  
Sbjct: 76  VVVSNMRIIGL-HCSSEDL-----HAGQIAV-----IKHGSKLKDCDLYFSRKPCSVCLK 124

Query: 89  AISLARIRRLYYGASNPKG 107
            I  A + R+ Y  S+P+ 
Sbjct: 125 MIVNAGVNRISYWPSDPEM 143


>gi|228969944|ref|ZP_04130664.1| ComE operon protein 2 [Bacillus thuringiensis serovar sotto str.
           T04001]
 gi|228789766|gb|EEM37628.1| ComE operon protein 2 [Bacillus thuringiensis serovar sotto str.
           T04001]
          Length = 113

 Score = 42.2 bits (99), Expect = 0.023,   Method: Composition-based stats.
 Identities = 13/46 (28%), Positives = 22/46 (47%), Gaps = 2/46 (4%)

Query: 56  ILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
           + A+    +  ++    E ++YVT  PC  C  AI  + I  +YY 
Sbjct: 1   MNALLQCAKFGAKT--EEAEIYVTHFPCLQCCKAIIQSGITAVYYA 44


>gi|125572136|gb|EAZ13651.1| hypothetical protein OsJ_03568 [Oryza sativa Japonica Group]
          Length = 184

 Score = 42.2 bits (99), Expect = 0.023,   Method: Composition-based stats.
 Identities = 15/48 (31%), Positives = 21/48 (43%), Gaps = 4/48 (8%)

Query: 53  HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
           HAE+ AI       +        LYVT+ PC  CA  I  + +  + Y
Sbjct: 83  HAEVNAILNTNHASA----AGQKLYVTMFPCNECAKIIIQSGVSEVIY 126


>gi|108563832|ref|YP_628148.1| riboflavin biosynthesis protein [Helicobacter pylori HPAG1]
 gi|107837605|gb|ABF85474.1| riboflavin biosynthesis protein [Helicobacter pylori HPAG1]
          Length = 344

 Score = 42.2 bits (99), Expect = 0.023,   Method: Composition-based stats.
 Identities = 35/182 (19%), Positives = 57/182 (31%), Gaps = 52/182 (28%)

Query: 1   MKKGNVFMSCALEEAQN----AALRNEIP-VGA-VAVLNNKIISRAGNRNRELKDVTAHA 54
           M+     +   L +A      A      P V   V   N++I+S         K  T HA
Sbjct: 1   MRLYESLLEMCLNKAWEYQTLALEN---PSVACMVLDKNHEILS----LETHKKAKTPHA 53

Query: 55  EILAIRMGCRIL------------------------SQEILPEVDLYVTLEPC------T 84
           E+LA +   +IL                              +    +TLEPC       
Sbjct: 54  EVLAAQSALKILRPSLKNDLEKLEDPKTLSDFLKTRHDNAFTDCVFLITLEPCNSYGKTP 113

Query: 85  MCAAAISLARIRRLYYGAS--NPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQ 142
            C+  + + + +R+   A     K GG         L   H    I     E +++ ++ 
Sbjct: 114 ACSELLEILKPKRVVIAAEENEAKKGG------LARLQKAHIETMICRN-LENKAKDLLL 166

Query: 143 DF 144
            F
Sbjct: 167 PF 168


>gi|301612575|ref|XP_002935780.1| PREDICTED: cytidine and dCMP deaminase domain-containing protein 1
           [Xenopus (Silurana) tropicalis]
          Length = 471

 Score = 42.2 bits (99), Expect = 0.025,   Method: Composition-based stats.
 Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 11/79 (13%)

Query: 29  VAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAA 88
           V V N +II      + +L     HA  +A+     I     L + DLY + +PC++C  
Sbjct: 64  VVVSNMRIIGL-HCSSEDL-----HAGQIAV-----IKHGSKLKDCDLYFSRKPCSVCLK 112

Query: 89  AISLARIRRLYYGASNPKG 107
            I  A + R+ Y  S+P+ 
Sbjct: 113 MIVNAGVNRISYWPSDPEM 131


>gi|15896130|ref|NP_349479.1| deoxycytidylate deaminase [Clostridium acetobutylicum ATCC 824]
 gi|15025923|gb|AAK80819.1|AE007785_4 Deoxycytidylate deaminase [Clostridium acetobutylicum ATCC 824]
 gi|325510284|gb|ADZ21920.1| Deoxycytidylate deaminase [Clostridium acetobutylicum EA 2018]
          Length = 162

 Score = 42.2 bits (99), Expect = 0.025,   Method: Composition-based stats.
 Identities = 24/108 (22%), Positives = 34/108 (31%), Gaps = 40/108 (37%)

Query: 27  GAVAVLNNKIISRAG---------------------NRNRELK---DVTAHAEILAIRMG 62
           GA+ V N++IIS                        N  R        + HAE  AI   
Sbjct: 29  GAIIVKNDEIISTGYTGSPRGRKNCSDLGVCIRKKLNIPRGTHYELCRSVHAEANAIISA 88

Query: 63  CRILSQEILPEVDLYVTLE------------PCTMCAAAISLARIRRL 98
            R      +    LY+  +            PC+MC   I  A I ++
Sbjct: 89  ARH----EMLGSVLYLVGKNAETHEYVEKAFPCSMCKRLILNAGIEKI 132


>gi|109946711|ref|YP_663939.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Helicobacter acinonychis str. Sheeba]
 gi|109713932|emb|CAJ98940.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Helicobacter acinonychis str. Sheeba]
          Length = 344

 Score = 42.2 bits (99), Expect = 0.026,   Method: Composition-based stats.
 Identities = 35/182 (19%), Positives = 59/182 (32%), Gaps = 52/182 (28%)

Query: 1   MKKGNVFMSCALEEAQN----AALRNEIP-VGA-VAVLNNKIISRAGNRNRELKDVTAHA 54
           M+     +   L +A      A      P V   V   N++I+S         K  T HA
Sbjct: 1   MRLYESLLEICLNKAWEYQTLALEN---PSVACMVLDKNHEILS----LEVHKKAKTPHA 53

Query: 55  EILAIRMGCRIL------------------------SQEILPEVDLYVTLEPC------T 84
           E+LA +   +IL                              +    +TLEPC       
Sbjct: 54  EVLATKSALKILRPSLKIDLDQLEDPKILSDFLKTHHDNAFKDCVFLITLEPCNSYGKTP 113

Query: 85  MCAAAISLARIRRLYYGASNPKG--GGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQ 142
            C+  + + + +R+       K   GG+E   + +  A    S        E ++R ++ 
Sbjct: 114 ACSELLEILKPKRVVIAIEENKAKKGGLERLKKAHVEALICPS-------LENKARDLLL 166

Query: 143 DF 144
            F
Sbjct: 167 PF 168


>gi|16330922|ref|NP_441650.1| hypothetical protein slr1161 [Synechocystis sp. PCC 6803]
 gi|1653416|dbj|BAA18330.1| slr1161 [Synechocystis sp. PCC 6803]
          Length = 199

 Score = 42.2 bits (99), Expect = 0.026,   Method: Composition-based stats.
 Identities = 15/87 (17%), Positives = 33/87 (37%), Gaps = 2/87 (2%)

Query: 16  QNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEIL--PE 73
           +          GA  +    + +   + N E ++   H E+  ++    +  ++     +
Sbjct: 25  REGVKAGNKLFGAAILKKEDLSTLVSSTNTETENPLWHGEVHTMKKLYELPRKKRPNPRD 84

Query: 74  VDLYVTLEPCTMCAAAISLARIRRLYY 100
                T EPC++C +AI+       YY
Sbjct: 85  CIFLATHEPCSLCLSAITWGGYDNFYY 111


>gi|294634133|ref|ZP_06712687.1| conserved hypothetical protein [Streptomyces sp. e14]
 gi|292829857|gb|EFF88212.1| conserved hypothetical protein [Streptomyces sp. e14]
          Length = 79

 Score = 42.2 bits (99), Expect = 0.027,   Method: Composition-based stats.
 Identities = 6/37 (16%), Positives = 15/37 (40%)

Query: 9  SCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNR 45
             ++ A++       P   V V +  I++ + N+  
Sbjct: 5  QRTIDLARHNVAEGGRPFATVIVKDGDILAESANKVN 41


>gi|322711206|gb|EFZ02780.1| cytidine/deoxycytidylate deaminase family protein [Metarhizium
           anisopliae ARSEF 23]
          Length = 221

 Score = 42.2 bits (99), Expect = 0.027,   Method: Composition-based stats.
 Identities = 14/62 (22%), Positives = 24/62 (38%), Gaps = 6/62 (9%)

Query: 45  RELKDVTAHAEILAIRMGCRILSQEILP------EVDLYVTLEPCTMCAAAISLARIRRL 98
            E      H EI  I+    +  Q+         +   + T EPC++C + I+ +     
Sbjct: 58  NERVSPLLHGEINCIQQFFTVDYQDPTARPDPQKDCIFFATHEPCSLCLSGIAWSGFNEF 117

Query: 99  YY 100
           YY
Sbjct: 118 YY 119


>gi|70918547|ref|XP_733233.1| hypothetical protein [Plasmodium chabaudi chabaudi]
 gi|70928518|ref|XP_736458.1| hypothetical protein [Plasmodium chabaudi chabaudi]
 gi|56504841|emb|CAH79427.1| hypothetical protein PC000287.03.0 [Plasmodium chabaudi chabaudi]
 gi|56511009|emb|CAH87211.1| hypothetical protein PC302372.00.0 [Plasmodium chabaudi chabaudi]
          Length = 76

 Score = 42.2 bits (99), Expect = 0.027,   Method: Composition-based stats.
 Identities = 12/57 (21%), Positives = 22/57 (38%), Gaps = 4/57 (7%)

Query: 93  ARIRRLYYGASNPKGGGIENGTQFYT--LATCHHSPEIYPGISEQRSRQIIQDFFKE 147
           A I+ +Y+   N + GG  +    +        H  E        RS  +++ F+K 
Sbjct: 2   AGIKNIYFCCLNERFGGCGSVLSLHEMYDNMNVHYIECKD--CTNRSINLMKLFYKA 56


>gi|308064267|gb|ADO06154.1| riboflavin biosynthesis protein (ribG) [Helicobacter pylori Sat464]
          Length = 344

 Score = 42.2 bits (99), Expect = 0.027,   Method: Composition-based stats.
 Identities = 29/148 (19%), Positives = 47/148 (31%), Gaps = 45/148 (30%)

Query: 1   MKKGNVFMSCALEEAQN----AALRNEIP-VGA-VAVLNNKIISRAGNRNRELKDVTAHA 54
           M+     +   L +A      A      P V   V   N++I+S         K  T HA
Sbjct: 1   MRLYESLLEICLNKAWEHQTLALEN---PSVACMVLDKNHEILS----LETHKKAKTPHA 53

Query: 55  EILAIRMGCRIL------------------------SQEILPEVDLYVTLEPC------T 84
           E+LA +   +IL                              +    +TLEPC       
Sbjct: 54  EVLAAQSALKILRPGLKNDLEKLEDPKTLSDFLKTHHNNAFKDCVFLITLEPCNSYGKTP 113

Query: 85  MCAAAISLARIRRLYYGAS--NPKGGGI 110
            C+  + + + +R+         K GG+
Sbjct: 114 ACSGLLEILKPKRVVIATEENEAKKGGL 141


>gi|188528275|ref|YP_001910962.1| riboflavin biosynthesis protein (ribG) [Helicobacter pylori Shi470]
 gi|188144515|gb|ACD48932.1| riboflavin biosynthesis protein (ribG) [Helicobacter pylori Shi470]
          Length = 344

 Score = 42.2 bits (99), Expect = 0.027,   Method: Composition-based stats.
 Identities = 29/148 (19%), Positives = 47/148 (31%), Gaps = 45/148 (30%)

Query: 1   MKKGNVFMSCALEEAQN----AALRNEIP-VGA-VAVLNNKIISRAGNRNRELKDVTAHA 54
           M+     +   L +A      A      P V   V   N++I+S         K  T HA
Sbjct: 1   MRLYESLLEICLNKAWEHQTLALEN---PSVACMVLDKNHEILS----LETHKKAKTPHA 53

Query: 55  EILAIRMGCRIL------------------------SQEILPEVDLYVTLEPC------T 84
           E+LA +   +IL                              +    +TLEPC       
Sbjct: 54  EVLAAQSALKILRPGLKNDLEKLEDPKTLSDFLKTHHNNAFKDCVFLITLEPCNSYGKTP 113

Query: 85  MCAAAISLARIRRLYYGAS--NPKGGGI 110
            C+  + + + +R+         K GG+
Sbjct: 114 ACSGLLEILKPKRVVIATEENEAKKGGL 141


>gi|149030186|gb|EDL85242.1| rCG52125, isoform CRA_b [Rattus norvegicus]
          Length = 478

 Score = 41.8 bits (98), Expect = 0.027,   Method: Composition-based stats.
 Identities = 21/77 (27%), Positives = 29/77 (37%), Gaps = 11/77 (14%)

Query: 29  VAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAA 88
           V V N KII      + +L                 I     L   DLY + +PC+ C  
Sbjct: 47  VVVKNMKIIGL-HCSSEDLHTG----------QIALIKHGSRLKNCDLYFSRKPCSACLK 95

Query: 89  AISLARIRRLYYGASNP 105
            I  A + R+ Y  S+P
Sbjct: 96  MIVNAGVNRISYWPSDP 112



 Score = 33.7 bits (77), Expect = 8.8,   Method: Composition-based stats.
 Identities = 20/76 (26%), Positives = 31/76 (40%), Gaps = 3/76 (3%)

Query: 53  HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNP-KGGGIE 111
           HAE  A+   C+ +  E      ++VT  PC  C   I  A I+++Y G  +  K     
Sbjct: 354 HAEQNALTFRCQDIKPEERSM--IFVTKCPCDECVPLIKGAGIKQIYAGDVDVGKKKADI 411

Query: 112 NGTQFYTLATCHHSPE 127
           +  +F  L   H    
Sbjct: 412 SYMKFGELEGVHKFTW 427


>gi|293605996|ref|ZP_06688362.1| cytidine/deoxycytidylate deaminase [Achromobacter piechaudii ATCC
          43553]
 gi|292815611|gb|EFF74726.1| cytidine/deoxycytidylate deaminase [Achromobacter piechaudii ATCC
          43553]
          Length = 56

 Score = 41.8 bits (98), Expect = 0.029,   Method: Composition-based stats.
 Identities = 11/53 (20%), Positives = 21/53 (39%), Gaps = 2/53 (3%)

Query: 2  KKGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAH 53
          +     ++  +  A+ A    + P G+V V  N +++    N      D T H
Sbjct: 4  EHDKQHLARCVALARQALESGDQPFGSVLVSANGEVLFEDHNHV-SGGDHTQH 55


>gi|255948680|ref|XP_002565107.1| Pc22g11610 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211592124|emb|CAP98449.1| Pc22g11610 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 543

 Score = 41.8 bits (98), Expect = 0.030,   Method: Composition-based stats.
 Identities = 13/50 (26%), Positives = 26/50 (52%), Gaps = 4/50 (8%)

Query: 64  RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENG 113
           R     +  ++D+Y++ EPC  C+  + L+R R + +    P+ G +  G
Sbjct: 427 RSQGGYLCTDLDVYLSHEPCLCCSMGMLLSRFRSVIF----PRRGRLGTG 472


>gi|240275146|gb|EER38661.1| conserved hypothetical protein [Ajellomyces capsulatus H143]
          Length = 184

 Score = 41.8 bits (98), Expect = 0.031,   Method: Composition-based stats.
 Identities = 23/113 (20%), Positives = 32/113 (28%), Gaps = 37/113 (32%)

Query: 6   VFMSCALEEAQNAALRNEIP-----VGAVAVLN------NKIISRAGNRNRELKDVTAHA 54
            +M  A      A      P      G+V V +        +I    N N +  +  +H 
Sbjct: 49  YWMRKA----NQALPDLGSPCPWAAFGSVVVNHTTAEELGDLICSGVNENLKSGNPVSHG 104

Query: 55  ---------EILAIRMGCRILSQEI-------------LPEVDLYVTLEPCTM 85
                    EI AI     IL+ +                E  LY   E C M
Sbjct: 105 SFESFQYVGEIAAITNCTDILTNKDGRFKLTSLEALEAFKEFTLYTNAESCPM 157


>gi|92112864|ref|YP_572792.1| CMP/dCMP deaminase, zinc-binding [Chromohalobacter salexigens DSM
           3043]
 gi|91795954|gb|ABE58093.1| CMP/dCMP deaminase, zinc-binding protein [Chromohalobacter
           salexigens DSM 3043]
          Length = 609

 Score = 41.8 bits (98), Expect = 0.031,   Method: Composition-based stats.
 Identities = 16/68 (23%), Positives = 25/68 (36%), Gaps = 6/68 (8%)

Query: 41  GNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
           GN+       + HAE  A     +      +    L+ T  PC +CA       + R+ Y
Sbjct: 464 GNQVHTR---SLHAEENAFLQISK-YGGMSVQGGSLFTTASPCELCAKKAFQLGVERIVY 519

Query: 101 GASNPKGG 108
              +P  G
Sbjct: 520 --IDPYPG 525


>gi|50730877|ref|XP_417059.1| PREDICTED: similar to protein kinase NYD-SP15 [Gallus gallus]
          Length = 495

 Score = 41.8 bits (98), Expect = 0.031,   Method: Composition-based stats.
 Identities = 22/78 (28%), Positives = 31/78 (39%), Gaps = 13/78 (16%)

Query: 29  VAVLNNKIISRAGNRNRELKDVTA-HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCA 87
           V V N  II             T  HA  +A+     I     L   DLY + +PC+ C 
Sbjct: 69  VVVKNMTIIG-------LHCSSTDLHAGQIAL-----IKHGSKLKNCDLYFSRKPCSTCL 116

Query: 88  AAISLARIRRLYYGASNP 105
             I  A + R+ Y  ++P
Sbjct: 117 KMIVNAGVNRISYWPADP 134



 Score = 33.7 bits (77), Expect = 8.0,   Method: Composition-based stats.
 Identities = 23/83 (27%), Positives = 35/83 (42%), Gaps = 13/83 (15%)

Query: 53  HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNP------- 105
           HAE  A+   CR +  +      ++VT  PC  C   I  A I+++Y G  +        
Sbjct: 379 HAEQNALTFRCREIKPDERSM--IFVTKCPCDECVPLIKGAGIKQIYAGDIDAGKKKADI 436

Query: 106 ---KGGGIENGTQFY-TLATCHH 124
              K G +E  ++F   L  CH 
Sbjct: 437 SYMKFGELEGVSKFTWQLNPCHP 459


>gi|255658905|ref|ZP_05404314.1| cytidine/deoxycytidylate deaminase family protein [Mitsuokella
           multacida DSM 20544]
 gi|260848854|gb|EEX68861.1| cytidine/deoxycytidylate deaminase family protein [Mitsuokella
           multacida DSM 20544]
          Length = 153

 Score = 41.8 bits (98), Expect = 0.032,   Method: Composition-based stats.
 Identities = 21/134 (15%), Positives = 40/134 (29%), Gaps = 39/134 (29%)

Query: 5   NVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGN-------RNRELKDVTA----- 52
             F+  A    + A        GA+ V +  IIS   N          +  +        
Sbjct: 12  EYFLDIAKAVGRRATCLRRR-YGAIIVKDKIIISTGYNGAPRGEANCIDTGNCERERLHV 70

Query: 53  ------------HAEILAIRMGCRILSQEILPEVDLYV----------TLEPCTMCAAAI 90
                       HAE  AI           +    +Y+          + +PC +C   +
Sbjct: 71  PKGQNYELCVAVHAEQNAIINA----DSAAMEGATIYIVGVNADGSLASGKPCLLCRRML 126

Query: 91  SLARIRRLYYGASN 104
             A++ ++ Y  ++
Sbjct: 127 RNAKLAKVVYYETD 140


>gi|317011639|gb|ADU85386.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Helicobacter pylori SouthAfrica7]
          Length = 344

 Score = 41.8 bits (98), Expect = 0.034,   Method: Composition-based stats.
 Identities = 33/182 (18%), Positives = 57/182 (31%), Gaps = 52/182 (28%)

Query: 1   MKKGNVFMSCALEEAQN----AALRNEIP-VGA-VAVLNNKIISRAGNRNRELKDVTAHA 54
           MK     +   L +A      A      P V   V   N++I+S         K  T HA
Sbjct: 1   MKLYESLLEICLNKAWEYQTLALEN---PSVACMVLDKNHEILS----LEVHKKAKTPHA 53

Query: 55  EILAIRMGCRIL------------------------SQEILPEVDLYVTLEPC------T 84
           E+LA +   +IL                              +    +TLEPC       
Sbjct: 54  EVLAAQSALKILRPSLKSDLEKLEDPKILSGFLKTHHNNAFKDCVFLITLEPCNSYGKTP 113

Query: 85  MCAAAISLARIRRLYYGAS--NPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQ 142
            C+  + + + +R+         K GG+    + +  A             E +++ ++ 
Sbjct: 114 ACSELLEILKPKRVVIATEENEAKKGGLARLKKAHVEA-----FTCQS--LENKAKDLLL 166

Query: 143 DF 144
            F
Sbjct: 167 PF 168


>gi|317179684|dbj|BAJ57472.1| riboflavin biosynthesis protein [Helicobacter pylori F30]
          Length = 344

 Score = 41.8 bits (98), Expect = 0.034,   Method: Composition-based stats.
 Identities = 28/148 (18%), Positives = 47/148 (31%), Gaps = 45/148 (30%)

Query: 1   MKKGNVFMSCALEEAQN----AALRNEIP-VGA-VAVLNNKIISRAGNRNRELKDVTAHA 54
           M+     +   L +A      A      P V   V   N++I+S         K  T HA
Sbjct: 1   MRLYESLLEICLNKAWEHQTLALEN---PSVACMVLDKNHEILS----LETHKKAKTPHA 53

Query: 55  EILAIRMGCRIL------------------------SQEILPEVDLYVTLEPC------T 84
           E+LA +   ++L                              +    +TLEPC       
Sbjct: 54  EVLAAKSALKVLRPSLKNDLEKLEDPKTLSDFLKTHHNNAFKDCVFLITLEPCNSYGKTP 113

Query: 85  MCAAAISLARIRRLYYGAS--NPKGGGI 110
            C+  + + + +R+         K GG+
Sbjct: 114 ACSGLLEILKPKRVVIATEENEAKKGGL 141


>gi|149635904|ref|XP_001513940.1| PREDICTED: hypothetical protein [Ornithorhynchus anatinus]
          Length = 517

 Score = 41.4 bits (97), Expect = 0.038,   Method: Composition-based stats.
 Identities = 22/77 (28%), Positives = 34/77 (44%), Gaps = 11/77 (14%)

Query: 29  VAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAA 88
           V V N KI+      + +L     HA  +A+     I     L   DLY + +PC+ C  
Sbjct: 91  VVVKNMKIVGL-HCSSEDL-----HAGQIAV-----IKRGSRLKNCDLYFSRKPCSACLK 139

Query: 89  AISLARIRRLYYGASNP 105
            I  A + R+ Y  ++P
Sbjct: 140 MIVNAGVNRISYWPADP 156



 Score = 33.7 bits (77), Expect = 8.9,   Method: Composition-based stats.
 Identities = 18/76 (23%), Positives = 31/76 (40%), Gaps = 3/76 (3%)

Query: 53  HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASN-PKGGGIE 111
           HAE  A+   C+ +  E      ++VT  PC  C   I  A I+++Y G  +  +     
Sbjct: 401 HAEQNALTFRCQEIKPEERSM--IFVTKCPCDECVPLIKGAGIKQIYAGDVDIGRKKADI 458

Query: 112 NGTQFYTLATCHHSPE 127
           +  +F  L   +    
Sbjct: 459 SYMRFGELEGVNKFTW 474


>gi|73979522|ref|XP_857740.1| PREDICTED: similar to Deoxycytidylate deaminase (dCMP deaminase)
           isoform 2 [Canis familiaris]
          Length = 88

 Score = 41.4 bits (97), Expect = 0.039,   Method: Composition-based stats.
 Identities = 10/34 (29%), Positives = 16/34 (47%)

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
           +   +    +YV L PC  CA  I  A I+ + +
Sbjct: 4   NSADVKGCTMYVALFPCNECAKLIIQAGIKEVIF 37


>gi|317181190|dbj|BAJ58976.1| riboflavin biosynthesis protein [Helicobacter pylori F32]
          Length = 344

 Score = 41.4 bits (97), Expect = 0.039,   Method: Composition-based stats.
 Identities = 29/148 (19%), Positives = 47/148 (31%), Gaps = 45/148 (30%)

Query: 1   MKKGNVFMSCALEEAQN----AALRNEIP-VGA-VAVLNNKIISRAGNRNRELKDVTAHA 54
           M+     +   L +A      A      P V   V   N++I+S         K  T HA
Sbjct: 1   MRLYESLLEICLNKAWEHQTLALEN---PSVACMVLDKNHEILS----LETHKKAKTPHA 53

Query: 55  EILAIRMGCRIL------------------------SQEILPEVDLYVTLEPC------T 84
           E+LA +   +IL                              +    +TLEPC       
Sbjct: 54  EVLAAKSALKILRPGLKNDLEKLEDPKTLSDFLKTHHDNAFKDCVFLITLEPCNSYGKTP 113

Query: 85  MCAAAISLARIRRLYYGAS--NPKGGGI 110
            C+  + + + +R+         K GG+
Sbjct: 114 ACSGLLEILKPKRVVIATEENEAKKGGL 141


>gi|261749222|ref|YP_003256907.1| deoxycytidylate deaminase [Blattabacterium sp. (Periplaneta
           americana) str. BPLAN]
 gi|261497314|gb|ACX83764.1| deoxycytidylate deaminase [Blattabacterium sp. (Periplaneta
           americana) str. BPLAN]
          Length = 72

 Score = 41.4 bits (97), Expect = 0.039,   Method: Composition-based stats.
 Identities = 14/52 (26%), Positives = 23/52 (44%), Gaps = 1/52 (1%)

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYT 118
           S        LY+T  PC  C+  I  ++I+R+ Y   + K     +G  F+ 
Sbjct: 4   SSYSCKGAFLYITHFPCKECSKLIYQSKIKRVVY-LYDHKYAIKNDGLNFFR 54


>gi|323508312|emb|CBQ68183.1| conserved hypothetical protein [Sporisorium reilianum]
          Length = 691

 Score = 41.4 bits (97), Expect = 0.040,   Method: Composition-based stats.
 Identities = 10/65 (15%), Positives = 19/65 (29%), Gaps = 16/65 (24%)

Query: 81  EPCTMCAAAISLARIRRLYYGASNPKGGGI----------------ENGTQFYTLATCHH 124
           EPC  C  A+  +R+  + +   +P  G                              +H
Sbjct: 596 EPCVYCTMALLHSRVAEIVFLLPSPGRGACCGAQLPPATRCDAGDDGGVYALQEQKGLNH 655

Query: 125 SPEIY 129
           S  ++
Sbjct: 656 SFAVW 660


>gi|330944425|ref|XP_003306373.1| hypothetical protein PTT_19508 [Pyrenophora teres f. teres 0-1]
 gi|311316145|gb|EFQ85535.1| hypothetical protein PTT_19508 [Pyrenophora teres f. teres 0-1]
          Length = 220

 Score = 41.4 bits (97), Expect = 0.041,   Method: Composition-based stats.
 Identities = 14/62 (22%), Positives = 21/62 (33%), Gaps = 6/62 (9%)

Query: 45  RELKDVTAHAEILAIRMGCRILSQEILP------EVDLYVTLEPCTMCAAAISLARIRRL 98
            E      H EI  I+    +             +     T EPC++C + I+ A     
Sbjct: 56  NERLSPLLHGEINCIQQFFTVDYPSSSTRPHPGKDCIFLATHEPCSLCLSGITWAGFNEF 115

Query: 99  YY 100
           YY
Sbjct: 116 YY 117


>gi|260551097|ref|ZP_05825301.1| pyrimidine deaminase [Acinetobacter sp. RUH2624]
 gi|260405864|gb|EEW99352.1| pyrimidine deaminase [Acinetobacter sp. RUH2624]
          Length = 286

 Score = 41.4 bits (97), Expect = 0.041,   Method: Composition-based stats.
 Identities = 11/54 (20%), Positives = 21/54 (38%), Gaps = 4/54 (7%)

Query: 94  RIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147
           R++++     +P       G Q       +   E+  GI E  + ++ Q F K 
Sbjct: 21  RLKKVVVACPDPNPLVAGKGVQILK----NAGIEVEIGICEDLAAKLNQGFLKA 70


>gi|121702379|ref|XP_001269454.1| tRNA-specific adenosine-34 deaminase subunit Tad3, putative
           [Aspergillus clavatus NRRL 1]
 gi|119397597|gb|EAW08028.1| tRNA-specific adenosine-34 deaminase subunit Tad3, putative
           [Aspergillus clavatus NRRL 1]
          Length = 538

 Score = 41.4 bits (97), Expect = 0.042,   Method: Composition-based stats.
 Identities = 12/41 (29%), Positives = 23/41 (56%)

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
           R+  R     +  ++D+Y+T EPC  C+  + L+R R + +
Sbjct: 389 RIRSRAQGGYLCTDLDVYLTHEPCLCCSMGLLLSRFRAVVF 429


>gi|308062769|gb|ADO04657.1| riboflavin biosynthesis protein (ribG) [Helicobacter pylori Cuz20]
          Length = 344

 Score = 41.4 bits (97), Expect = 0.042,   Method: Composition-based stats.
 Identities = 32/185 (17%), Positives = 56/185 (30%), Gaps = 58/185 (31%)

Query: 1   MKKGNVFMSCALEEAQN----AALRNEIP-VGA-VAVLNNKIISRAGNRNRELKDVTAHA 54
           M+     +   L +A      A      P V   V   N++I+S         K  T HA
Sbjct: 1   MRLYESLLEICLNKAWEHQTLALEN---PSVACMVLDKNHEILS----LETHKKAKTPHA 53

Query: 55  EILAIRMGCRIL------------------------SQEILPEVDLYVTLEPC------T 84
           E+LA +   +IL                              +    +TLEPC       
Sbjct: 54  EVLAAQSALKILRPGLKNDLEKLEDPKTLSDFLKTHHDNAFKDCVFLITLEPCNSYGKTP 113

Query: 85  MCAAAISLARIRRLYYGAS--NPKGGGIENGTQFYTLATCHHSPEIYPGI---SEQRSRQ 139
            C+  + + + +R+         K GG+                 I   +    E +++ 
Sbjct: 114 ACSGLLEILKPKRVVIATEENEAKKGGLARL----------KKARIEGVVCESLENKAKD 163

Query: 140 IIQDF 144
           ++  F
Sbjct: 164 LLLPF 168


>gi|302498222|ref|XP_003011109.1| hypothetical protein ARB_02631 [Arthroderma benhamiae CBS 112371]
 gi|291174657|gb|EFE30469.1| hypothetical protein ARB_02631 [Arthroderma benhamiae CBS 112371]
          Length = 251

 Score = 41.4 bits (97), Expect = 0.042,   Method: Composition-based stats.
 Identities = 13/43 (30%), Positives = 18/43 (41%), Gaps = 5/43 (11%)

Query: 4   GNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGNRN 44
              FM  A   AQ +    R    VG V V +N+++S   N  
Sbjct: 191 DQYFMQLASLAAQRSNCMKRR---VGCVIVKDNRVMSTGYNGT 230


>gi|27366639|ref|NP_762166.1| Deoxycytidylate deaminase [Vibrio vulnificus CMCP6]
 gi|27358205|gb|AAO07156.1|AE016808_176 Deoxycytidylate deaminase [Vibrio vulnificus CMCP6]
          Length = 622

 Score = 41.4 bits (97), Expect = 0.042,   Method: Composition-based stats.
 Identities = 22/118 (18%), Positives = 35/118 (29%), Gaps = 30/118 (25%)

Query: 53  HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY------------ 100
           HAE  A     +     +     LY T  PC +CA      +I  + +            
Sbjct: 466 HAEENAFLQVSKYGGMPVKHGY-LYTTASPCELCAKKAYQLKIDSVIFIDPYPGVANDHI 524

Query: 101 ---GASNPK----GGGIENGTQFYTLATCHHSPEIYPG----------ISEQRSRQII 141
              G   PK     G I    Q        +  E+  G          I  + ++++I
Sbjct: 525 INCGVDTPKLKLFSGAIGRAYQQLFEPIIPYKDELEIGLQLNVPNQKKILVEENKELI 582


>gi|218682789|ref|ZP_03530390.1| deoxycytidylate deaminase-related protein [Rhizobium etli CIAT 894]
          Length = 331

 Score = 41.4 bits (97), Expect = 0.043,   Method: Composition-based stats.
 Identities = 17/54 (31%), Positives = 23/54 (42%), Gaps = 2/54 (3%)

Query: 53  HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPK 106
           HAE+ A+    R     +     L+VT  PC  CA  I  A +  + Y    PK
Sbjct: 179 HAEMDALLSAGREGVSTV--GTRLFVTTFPCHYCARHIVSAGVYEVQYIEPYPK 230


>gi|38683676|gb|AAR26853.1| FirrV-1-A29 [Feldmannia irregularis virus a]
          Length = 120

 Score = 41.4 bits (97), Expect = 0.044,   Method: Composition-based stats.
 Identities = 21/94 (22%), Positives = 37/94 (39%), Gaps = 19/94 (20%)

Query: 25  PV---GAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDL----- 76
           PV   GA+      I+ +  NR+      + HAE+ A++   +      L          
Sbjct: 22  PVFRHGALVTNRTTIVGKGSNRS------SLHAEVSALQNV-QGGQHMRLRVYVCRVNAR 74

Query: 77  --YVTLEPCTMCAAAISLARIRRLYYGASNPKGG 108
             ++  +PC  C   +    + R+YY  S+  GG
Sbjct: 75  GKFMNSKPCQNCMNYMKHRGVYRVYY--SDDAGG 106


>gi|289163995|ref|YP_003454133.1| cytidine/deoxycytidylate deaminase [Legionella longbeachae NSW150]
 gi|288857168|emb|CBJ10984.1| putative cytidine/deoxycytidylate deaminase [Legionella longbeachae
           NSW150]
          Length = 525

 Score = 41.0 bits (96), Expect = 0.047,   Method: Composition-based stats.
 Identities = 14/50 (28%), Positives = 19/50 (38%)

Query: 74  VDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123
             LY T  PC +CA  I  + I R+ Y  + PK    E           +
Sbjct: 396 AILYTTTFPCHLCAKEIINSGINRVVYLEAYPKSKNKELYPNLVDFDPKN 445


>gi|115388627|ref|XP_001211819.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
 gi|114195903|gb|EAU37603.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
          Length = 701

 Score = 41.0 bits (96), Expect = 0.047,   Method: Composition-based stats.
 Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 6/50 (12%)

Query: 59  IRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGG 108
           IR   R     +  ++D+YV+ EPC  C+  + L+R R + +    P+ G
Sbjct: 587 IR--SRSEGGYLCTDLDVYVSREPCLCCSMGMLLSRFRAVVF----PRRG 630


>gi|210135672|ref|YP_002302111.1| riboflavin biosynthesis protein [Helicobacter pylori P12]
 gi|210133640|gb|ACJ08631.1| riboflavin biosynthesis protein [Helicobacter pylori P12]
          Length = 344

 Score = 41.0 bits (96), Expect = 0.048,   Method: Composition-based stats.
 Identities = 30/148 (20%), Positives = 48/148 (32%), Gaps = 45/148 (30%)

Query: 1   MKKGNVFMSCALEEAQN----AALRNEIP-VGA-VAVLNNKIISRAGNRNRELKDVTAHA 54
           M+     +   L +A      A      P V   V   N++I+S         K  T HA
Sbjct: 1   MRLYESLLEMCLNKAWEYQTLALEN---PSVACMVLDKNHEILS----LETHKKAKTPHA 53

Query: 55  EILAIRMGCRIL------------------------SQEILPEVDLYVTLEPC------T 84
           E+LA +   +IL                              +    +TLEPC       
Sbjct: 54  EVLAAKSALKILRPHLKNDLEKLEDPKILSDFLKTRHDNAFTDCVFLITLEPCNSYGKTP 113

Query: 85  MCAAAISLARIRRLYYGAS--NPKGGGI 110
            C+  + + + +R+   A     K GG+
Sbjct: 114 ACSELLEILKPKRVVIAAEENEAKKGGL 141


>gi|126640314|ref|YP_001083298.1| hypothetical protein A1S_0221 [Acinetobacter baumannii ATCC 17978]
          Length = 288

 Score = 41.0 bits (96), Expect = 0.048,   Method: Composition-based stats.
 Identities = 20/76 (26%), Positives = 32/76 (42%), Gaps = 10/76 (13%)

Query: 78  VTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPG 131
           +TLEPC        CA A+  A+++++     +P       G Q       +   E+  G
Sbjct: 1   MTLEPCAHYGRTPPCAEALVKAQVKKVVVACPDPNPLVAGKGVQILK----NAGIEVEIG 56

Query: 132 ISEQRSRQIIQDFFKE 147
           I E  + Q+ Q F K 
Sbjct: 57  ICEDLAAQLNQGFLKA 72


>gi|303280045|ref|XP_003059315.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226459151|gb|EEH56447.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 146

 Score = 41.0 bits (96), Expect = 0.049,   Method: Composition-based stats.
 Identities = 36/168 (21%), Positives = 55/168 (32%), Gaps = 44/168 (26%)

Query: 4   GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIIS------------RAGNRNRELKDVT 51
              +M  ALE A  A  +            N ++                +         
Sbjct: 1   DKAYMRRALELAATATGQ---------THPNPLVGCVVVNDDGDVVGEGYHPKAGE---- 47

Query: 52  AHAEILAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNP 105
            HAE+ A+       + +       YV+LEPC        C+ A+  A +RR+  G  +P
Sbjct: 48  PHAEVFAL-----RAAGDAARGATAYVSLEPCDHFGRTPPCSRALVDAGVRRVVVGFVDP 102

Query: 106 KGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF----KERR 149
                  G +    A      E+  G  E   R+I  DF     K+RR
Sbjct: 103 DPRVSGGGIRTLLDAG----IEVTVGCEEAACREINADFIARNTKKRR 146


>gi|238854305|ref|ZP_04644649.1| riboflavin biosynthesis protein ribBA [Lactobacillus gasseri
          202-4]
 gi|282851977|ref|ZP_06261335.1| conserved domain protein [Lactobacillus gasseri 224-1]
 gi|311110735|ref|ZP_07712132.1| 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase
          II [Lactobacillus gasseri MV-22]
 gi|238833116|gb|EEQ25409.1| riboflavin biosynthesis protein ribBA [Lactobacillus gasseri
          202-4]
 gi|282556737|gb|EFB62341.1| conserved domain protein [Lactobacillus gasseri 224-1]
 gi|311065889|gb|EFQ46229.1| 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase
          II [Lactobacillus gasseri MV-22]
          Length = 92

 Score = 41.0 bits (96), Expect = 0.052,   Method: Composition-based stats.
 Identities = 13/36 (36%), Positives = 19/36 (52%), Gaps = 2/36 (5%)

Query: 1  MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKI 36
          M+K   +M+ AL+EA+    +    VGAV     KI
Sbjct: 1  MEKDQYYMNLALQEAKKGRFQ--TLVGAVIFKELKI 34


>gi|313898703|ref|ZP_07832238.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Clostridium sp. HGF2]
 gi|312956587|gb|EFR38220.1| cytidine and deoxycytidylate deaminase zinc-binding region
           [Clostridium sp. HGF2]
          Length = 165

 Score = 41.0 bits (96), Expect = 0.053,   Method: Composition-based stats.
 Identities = 30/131 (22%), Positives = 46/131 (35%), Gaps = 33/131 (25%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAG--------NR-------NRE 46
            K N ++  A   AQ +  R  I  GAV V +++I+S           N          +
Sbjct: 7   DKINYYLDIAGTVAQRSTCRRRI-YGAVIVQHDEIVSTGYVGAPRGRTNCLDLEYCIREK 65

Query: 47  LKDVTA---------HAEILAIRMGCR---ILSQEILPEVD-----LYVTLEPCTMCAAA 89
           L+             HAE  AI    R   + +   L   +     L  +   C+MC   
Sbjct: 66  LRVPRGERYELCRSVHAEANAIISAQRSEMLGADMFLVGYEAVSGELIQSSNSCSMCKRM 125

Query: 90  ISLARIRRLYY 100
           I  A I ++Y 
Sbjct: 126 IINAGISKVYI 136


>gi|261319414|ref|ZP_05958611.1| cytidine/deoxycytidylate deaminase [Brucella pinnipedialis B2/94]
 gi|265986588|ref|ZP_06099145.1| cytidine/deoxycytidylate deaminase [Brucella pinnipedialis
           M292/94/1]
 gi|261298637|gb|EEY02134.1| cytidine/deoxycytidylate deaminase [Brucella pinnipedialis B2/94]
 gi|264658785|gb|EEZ29046.1| cytidine/deoxycytidylate deaminase [Brucella pinnipedialis
           M292/94/1]
          Length = 559

 Score = 41.0 bits (96), Expect = 0.053,   Method: Composition-based stats.
 Identities = 16/54 (29%), Positives = 23/54 (42%), Gaps = 2/54 (3%)

Query: 53  HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPK 106
           HAE+ A+    R     +     L+VT  PC  CA  I  A +  + +    PK
Sbjct: 399 HAEMDALLSAGREGVSTV--GTRLFVTTYPCHYCARHIVSAGVYEVQFIEPYPK 450


>gi|254711783|ref|ZP_05173594.1| deoxycytidylate deaminase-related protein [Brucella pinnipedialis
           B2/94]
 gi|256029584|ref|ZP_05443198.1| deoxycytidylate deaminase-related protein [Brucella pinnipedialis
           M292/94/1]
          Length = 550

 Score = 41.0 bits (96), Expect = 0.053,   Method: Composition-based stats.
 Identities = 16/54 (29%), Positives = 23/54 (42%), Gaps = 2/54 (3%)

Query: 53  HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPK 106
           HAE+ A+    R     +     L+VT  PC  CA  I  A +  + +    PK
Sbjct: 390 HAEMDALLSAGREGVSTV--GTRLFVTTYPCHYCARHIVSAGVYEVQFIEPYPK 441


>gi|225629010|ref|ZP_03787044.1| deoxycytidylate deaminase [Brucella ceti str. Cudo]
 gi|260167328|ref|ZP_05754139.1| deoxycytidylate deaminase-related protein [Brucella sp. F5/99]
 gi|225616856|gb|EEH13904.1| deoxycytidylate deaminase [Brucella ceti str. Cudo]
          Length = 550

 Score = 41.0 bits (96), Expect = 0.053,   Method: Composition-based stats.
 Identities = 16/54 (29%), Positives = 23/54 (42%), Gaps = 2/54 (3%)

Query: 53  HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPK 106
           HAE+ A+    R     +     L+VT  PC  CA  I  A +  + +    PK
Sbjct: 390 HAEMDALLSAGREGVSTV--GTRLFVTTYPCHYCARHIVSAGVYEVQFIEPYPK 441


>gi|119496371|ref|XP_001264959.1| tRNA-specific adenosine-34 deaminase subunit Tad3, putative
           [Neosartorya fischeri NRRL 181]
 gi|119413121|gb|EAW23062.1| tRNA-specific adenosine-34 deaminase subunit Tad3, putative
           [Neosartorya fischeri NRRL 181]
          Length = 506

 Score = 41.0 bits (96), Expect = 0.059,   Method: Composition-based stats.
 Identities = 13/42 (30%), Positives = 23/42 (54%), Gaps = 2/42 (4%)

Query: 59  IRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
           IR   R     +  ++D+Y+T EPC  C+  + L+R R + +
Sbjct: 377 IR--SRAQGGYLCTDLDVYLTHEPCLCCSMGMLLSRFRAVIF 416


>gi|166165237|gb|ABY83966.1| putative deoxycytidylate deaminase [Brucella pinnipedialis]
          Length = 448

 Score = 41.0 bits (96), Expect = 0.060,   Method: Composition-based stats.
 Identities = 16/54 (29%), Positives = 23/54 (42%), Gaps = 2/54 (3%)

Query: 53  HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPK 106
           HAE+ A+    R     +     L+VT  PC  CA  I  A +  + +    PK
Sbjct: 288 HAEMDALLSAGREGVSTV--GTRLFVTTYPCHYCARHIVSAGVYEVQFIEPYPK 339


>gi|261838779|gb|ACX98545.1| riboflavin-specific deaminase [Helicobacter pylori 51]
          Length = 344

 Score = 40.7 bits (95), Expect = 0.064,   Method: Composition-based stats.
 Identities = 29/148 (19%), Positives = 47/148 (31%), Gaps = 45/148 (30%)

Query: 1   MKKGNVFMSCALEEAQN----AALRNEIP-VGA-VAVLNNKIISRAGNRNRELKDVTAHA 54
           M+     +   L +A      A      P V   V   N++I+S         K  T HA
Sbjct: 1   MRLYESLLEICLNKAWEHQTLALEN---PSVACMVLDKNHEILS----LETHKKAKTPHA 53

Query: 55  EILAIRMGCRIL------------------------SQEILPEVDLYVTLEPC------T 84
           E+LA +   +IL                              +    +TLEPC       
Sbjct: 54  EVLAAKSALKILRPGLKNDLEKLEDPKTLSDFLKTHHDNAFKDCIFLITLEPCNSYGKTP 113

Query: 85  MCAAAISLARIRRLYYGAS--NPKGGGI 110
            C+  + + + +R+         K GG+
Sbjct: 114 ACSGLLEILKPKRVVIATEENEAKKGGL 141


>gi|261756737|ref|ZP_06000446.1| cytidine/deoxycytidylate deaminase [Brucella sp. F5/99]
 gi|261736721|gb|EEY24717.1| cytidine/deoxycytidylate deaminase [Brucella sp. F5/99]
          Length = 448

 Score = 40.7 bits (95), Expect = 0.064,   Method: Composition-based stats.
 Identities = 16/54 (29%), Positives = 23/54 (42%), Gaps = 2/54 (3%)

Query: 53  HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPK 106
           HAE+ A+    R     +     L+VT  PC  CA  I  A +  + +    PK
Sbjct: 288 HAEMDALLSAGREGVSTV--GTRLFVTTYPCHYCARHIVSAGVYEVQFIEPYPK 339


>gi|321254677|ref|XP_003193159.1| hypothetical protein CGB_C9470W [Cryptococcus gattii WM276]
 gi|317459628|gb|ADV21372.1| hypothetical protein CNC00250 [Cryptococcus gattii WM276]
          Length = 1858

 Score = 40.7 bits (95), Expect = 0.068,   Method: Composition-based stats.
 Identities = 16/75 (21%), Positives = 24/75 (32%), Gaps = 12/75 (16%)

Query: 71   LPEVDLYVTLEPC-------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCH 123
            L +   Y TLEPC         CA  +  A +R +Y G   P       G +        
Sbjct: 1779 LKDAVCYATLEPCSYRTSGGPSCALELVRAGVRAVYLGVEEPPDFVECEGVRILQDGG-- 1836

Query: 124  HSPEIYPGI-SEQRS 137
                +   +  E+  
Sbjct: 1837 --VRVVRAVGLEEDC 1849


>gi|126327689|ref|XP_001378718.1| PREDICTED: hypothetical protein [Monodelphis domestica]
          Length = 517

 Score = 40.7 bits (95), Expect = 0.069,   Method: Composition-based stats.
 Identities = 23/90 (25%), Positives = 38/90 (42%), Gaps = 19/90 (21%)

Query: 24  IPV--------GAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVD 75
           +P+        G V V N KI+      + +L     HA  +A+     I     +   D
Sbjct: 78  VPIDKKQVKKTGLVVVKNMKIVGL-HCSSEDL-----HAGQIAL-----IRHGSKMKNCD 126

Query: 76  LYVTLEPCTMCAAAISLARIRRLYYGASNP 105
           LY + +PC+ C   I  A + R+ Y  ++P
Sbjct: 127 LYFSRKPCSACLKMIVNAGVNRISYWPADP 156


>gi|108758788|ref|YP_633844.1| cytidine deaminase [Myxococcus xanthus DK 1622]
 gi|108462668|gb|ABF87853.1| cytidine deaminase [Myxococcus xanthus DK 1622]
          Length = 134

 Score = 40.7 bits (95), Expect = 0.070,   Method: Composition-based stats.
 Identities = 19/92 (20%), Positives = 29/92 (31%), Gaps = 7/92 (7%)

Query: 4  GNVFMSCALEEAQNAALRNEIP-----VGA-VAVLNNKIISRAGNRNRELKDVTAHAEIL 57
            +      EEA     R  +P     VGA V   +  +++   N       +T  AE  
Sbjct: 3  DEIPWERLFEEAARVRARAHVPYSRFPVGAAVLFADGAVVA-GCNVENATYGLTVCAERN 61

Query: 58 AIRMGCRILSQEILPEVDLYVTLEPCTMCAAA 89
          A          + +    +  T EPC  C   
Sbjct: 62 AFAAAVAQGHTQPVAVAIVVDTPEPCPPCGMC 93


>gi|159130929|gb|EDP56042.1| tRNA-specific adenosine-34 deaminase subunit Tad3, putative
           [Aspergillus fumigatus A1163]
          Length = 506

 Score = 40.7 bits (95), Expect = 0.070,   Method: Composition-based stats.
 Identities = 13/42 (30%), Positives = 23/42 (54%), Gaps = 2/42 (4%)

Query: 59  IRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
           IR   R     +  ++D+Y+T EPC  C+  + L+R R + +
Sbjct: 376 IR--SRAQGGYLCTDLDVYLTHEPCLCCSMGMLLSRFRAVIF 415


>gi|310659431|ref|YP_003937152.1| cmp/dcmp deaminase, zinc-binding [Clostridium sticklandii DSM 519]
 gi|308826209|emb|CBH22247.1| CMP/dCMP deaminase, zinc-binding [Clostridium sticklandii]
          Length = 162

 Score = 40.7 bits (95), Expect = 0.073,   Method: Composition-based stats.
 Identities = 22/110 (20%), Positives = 34/110 (30%), Gaps = 40/110 (36%)

Query: 27  GAVAVLNNKIISRAG--------NR-------NRELKDVTA---------HAEILAIRMG 62
           G++ V N++IIS           N           +              H+E+ AI   
Sbjct: 29  GSIIVKNDEIISTGYTGAPRGRKNCIDLGYCYREAMNIPRGQMYETCRSVHSEMNAIISA 88

Query: 63  CRILSQEILPEVDLYV------TLE------PCTMCAAAISLARIRRLYY 100
            R      +    LY+      T E       C+MC   I  A I+ +  
Sbjct: 89  ERR----DMIGATLYLVGKDMATGELVENADSCSMCKRVIINAGIKEVII 134


>gi|70991212|ref|XP_750455.1| tRNA-specific adenosine-34 deaminase subunit Tad3 [Aspergillus
           fumigatus Af293]
 gi|66848087|gb|EAL88417.1| tRNA-specific adenosine-34 deaminase subunit Tad3, putative
           [Aspergillus fumigatus Af293]
          Length = 506

 Score = 40.7 bits (95), Expect = 0.074,   Method: Composition-based stats.
 Identities = 12/41 (29%), Positives = 23/41 (56%)

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
           R+  R     +  ++D+Y+T EPC  C+  + L+R R + +
Sbjct: 375 RIRSRAQGGYLCTDLDVYLTHEPCLCCSMGMLLSRFRAVIF 415


>gi|217034301|ref|ZP_03439718.1| hypothetical protein HP9810_885g32 [Helicobacter pylori 98-10]
 gi|216943273|gb|EEC22738.1| hypothetical protein HP9810_885g32 [Helicobacter pylori 98-10]
          Length = 344

 Score = 40.7 bits (95), Expect = 0.075,   Method: Composition-based stats.
 Identities = 29/148 (19%), Positives = 47/148 (31%), Gaps = 45/148 (30%)

Query: 1   MKKGNVFMSCALEEAQN----AALRNEIP-VGA-VAVLNNKIISRAGNRNRELKDVTAHA 54
           M+     +   L +A      A      P V   V   N++I+S         K  T HA
Sbjct: 1   MRLYESLLEICLNKAWEHQTLALEN---PSVACMVLDKNHEILS----LETHKKAKTPHA 53

Query: 55  EILAIRMGCRIL------------------------SQEILPEVDLYVTLEPC------T 84
           E+LA +   +IL                              +    +TLEPC       
Sbjct: 54  EVLAAKSALKILRPGLKNDLEKLEDPKTLSDFLKTHHDNAFKDCIFLITLEPCNSYGKTP 113

Query: 85  MCAAAISLARIRRLYYGAS--NPKGGGI 110
            C+  + + + +R+         K GG+
Sbjct: 114 ACSGLLEILKPKRVVIATEENEAKKGGL 141


>gi|238922240|ref|YP_002935754.1| dCMP deaminase [Eubacterium eligens ATCC 27750]
 gi|238873912|gb|ACR73620.1| dCMP deaminase [Eubacterium eligens ATCC 27750]
          Length = 626

 Score = 40.3 bits (94), Expect = 0.080,   Method: Composition-based stats.
 Identities = 15/56 (26%), Positives = 23/56 (41%), Gaps = 3/56 (5%)

Query: 53  HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGG 108
           HAE  A     +    +I     L+ T  PC +C+       I+ +YY   +P  G
Sbjct: 508 HAEENAFLQIAKYGGAKI-QGGKLFTTASPCELCSKKAYQLGIKEIYY--IDPYPG 560


>gi|319948958|ref|ZP_08023063.1| hypothetical protein ES5_06172 [Dietzia cinnamea P4]
 gi|319437396|gb|EFV92411.1| hypothetical protein ES5_06172 [Dietzia cinnamea P4]
          Length = 88

 Score = 40.3 bits (94), Expect = 0.080,   Method: Composition-based stats.
 Identities = 13/59 (22%), Positives = 19/59 (32%), Gaps = 5/59 (8%)

Query: 10 CALEEAQNAALRNEIPVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
           AL  A         PVGAV +     ++ R             HAE++A+        
Sbjct: 29 IALSRAALGVSTPNPPVGAVVLDAAGGVVGRG--ATEAPGG--RHAEVVALDEAGDRRG 83


>gi|297838973|ref|XP_002887368.1| hypothetical protein ARALYDRAFT_894978 [Arabidopsis lyrata subsp.
          lyrata]
 gi|297333209|gb|EFH63627.1| hypothetical protein ARALYDRAFT_894978 [Arabidopsis lyrata subsp.
          lyrata]
          Length = 81

 Score = 40.3 bits (94), Expect = 0.083,   Method: Composition-based stats.
 Identities = 13/27 (48%), Positives = 19/27 (70%)

Query: 72 PEVDLYVTLEPCTMCAAAISLARIRRL 98
             D+++ LEPCTMCA A+   RI+R+
Sbjct: 47 TGYDIFLMLEPCTMCAMALVHQRIKRI 73


>gi|315044977|ref|XP_003171864.1| hypothetical protein MGYG_06408 [Arthroderma gypseum CBS 118893]
 gi|311344207|gb|EFR03410.1| hypothetical protein MGYG_06408 [Arthroderma gypseum CBS 118893]
          Length = 444

 Score = 40.3 bits (94), Expect = 0.085,   Method: Composition-based stats.
 Identities = 14/61 (22%), Positives = 22/61 (36%)

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
              +   +DLY T EPC  C+  + L+R R +    +  +     N          H   
Sbjct: 355 GGYLCTGLDLYTTHEPCICCSMGMLLSRFRSITVLNAGMRRSAEGNALDAVNGYGLHWRE 414

Query: 127 E 127
           E
Sbjct: 415 E 415


>gi|189209511|ref|XP_001941088.1| cytidine/deoxycytidylate deaminase family protein [Pyrenophora
           tritici-repentis Pt-1C-BFP]
 gi|187977181|gb|EDU43807.1| cytidine/deoxycytidylate deaminase family protein [Pyrenophora
           tritici-repentis Pt-1C-BFP]
          Length = 220

 Score = 40.3 bits (94), Expect = 0.089,   Method: Composition-based stats.
 Identities = 15/66 (22%), Positives = 21/66 (31%), Gaps = 14/66 (21%)

Query: 45  RELKDVTAHAEILAIRMGCRILSQEILP----------EVDLYVTLEPCTMCAAAISLAR 94
            E      H EI  I    +       P          +     T EPC++C + I+ A 
Sbjct: 56  NERLSPLLHGEINCI----QKFFTVDYPNPSTRPHPAKDCIFLATHEPCSLCLSGITWAG 111

Query: 95  IRRLYY 100
               YY
Sbjct: 112 FNEFYY 117


>gi|169613456|ref|XP_001800145.1| hypothetical protein SNOG_09859 [Phaeosphaeria nodorum SN15]
 gi|111062004|gb|EAT83124.1| hypothetical protein SNOG_09859 [Phaeosphaeria nodorum SN15]
          Length = 228

 Score = 40.3 bits (94), Expect = 0.089,   Method: Composition-based stats.
 Identities = 18/93 (19%), Positives = 32/93 (34%), Gaps = 10/93 (10%)

Query: 16  QNAALRNEIPVGAVAVLNNKI--ISRAGNRNRELKDVTAHAEILAIRMGCRILSQEIL-- 71
           +          GA  +  + +  ++ A N   E      H EI  I+    I   +    
Sbjct: 30  RKGVSSGSKLFGAAILARHDVKPLTVATN--NERVSPLFHGEIACIQQFFTIDYPDSTTR 87

Query: 72  ----PEVDLYVTLEPCTMCAAAISLARIRRLYY 100
                +     T EPC++C + I+ +     YY
Sbjct: 88  PDPGRDCIFLATHEPCSLCLSGITWSGFTEFYY 120


>gi|212539281|ref|XP_002149796.1| conserved hypothetical protein [Penicillium marneffei ATCC 18224]
 gi|210069538|gb|EEA23629.1| conserved hypothetical protein [Penicillium marneffei ATCC 18224]
          Length = 217

 Score = 40.3 bits (94), Expect = 0.093,   Method: Composition-based stats.
 Identities = 16/91 (17%), Positives = 31/91 (34%), Gaps = 6/91 (6%)

Query: 14  EAQNAALRNEIPVGAVAVLNNK--IISRAGNRNRELKDVTAHAEILAIRMGCR--ILSQE 69
            +  A        GA  +  +   ++    N+  E      H E   ++         + 
Sbjct: 28  LSAAAVAAGSKLFGATILRKSDLSVVYADTNQ--ERGSPLWHGETWTLKQFFEIPADQRP 85

Query: 70  ILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
            + E    +T EPC++C +AI  +      Y
Sbjct: 86  DVAECLFLMTHEPCSLCLSAIVWSGFDNFIY 116


>gi|282598886|ref|YP_003358436.1| hypothetical protein PP-LIT1_gp39 [Pseudomonas phage LIT1]
 gi|259048646|emb|CAZ66295.1| hypothetical protein [Pseudomonas phage LIT1]
          Length = 172

 Score = 40.3 bits (94), Expect = 0.095,   Method: Composition-based stats.
 Identities = 24/120 (20%), Positives = 36/120 (30%), Gaps = 23/120 (19%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKD----------- 49
           MK   ++MS A   A+ +       VG V V     +    N      D           
Sbjct: 10  MKYRRLYMSIATNAAKQSVAERHQ-VGGVLVTTTGALFTGWNGTMPGTDNCCENGEYLRE 68

Query: 50  ---------VTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
                       HAE   +    R      L    L++T  PC  CA  I+   +  + +
Sbjct: 69  ETRFKTTPYGVIHAEHNILAWASRSGVP--LDNSVLWITRAPCVRCAEMIATHGVHLVLF 126


>gi|148927870|ref|ZP_01811286.1| histidine triad (HIT) protein [candidate division TM7 genomosp.
           GTL1]
 gi|147886785|gb|EDK72339.1| histidine triad (HIT) protein [candidate division TM7 genomosp.
           GTL1]
          Length = 497

 Score = 40.3 bits (94), Expect = 0.095,   Method: Composition-based stats.
 Identities = 13/48 (27%), Positives = 19/48 (39%), Gaps = 2/48 (4%)

Query: 53  HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
           HAE+  I    +  +   L    L++ L PC  CA   +   I    Y
Sbjct: 427 HAEVEMIVKAGKQRAS--LKGTTLFINLLPCPSCARMFAETDIEEFVY 472


>gi|114649632|ref|XP_001153106.1| PREDICTED: hypothetical protein LOC467357 isoform 1 [Pan
           troglodytes]
          Length = 419

 Score = 40.3 bits (94), Expect = 0.099,   Method: Composition-based stats.
 Identities = 16/53 (30%), Positives = 25/53 (47%), Gaps = 5/53 (9%)

Query: 53  HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNP 105
           HA  +A+     I     L   DLY + +PC+ C   I  A + R+ Y  ++P
Sbjct: 14  HAGQIAL-----IKHGSRLKNCDLYFSRKPCSACLKMIVNAGVNRISYWPADP 61


>gi|332521384|ref|ZP_08397840.1| cytidine deaminase [Lacinutrix algicola 5H-3-7-4]
 gi|332043112|gb|EGI79310.1| cytidine deaminase [Lacinutrix algicola 5H-3-7-4]
          Length = 182

 Score = 40.3 bits (94), Expect = 0.10,   Method: Composition-based stats.
 Identities = 23/98 (23%), Positives = 31/98 (31%), Gaps = 18/98 (18%)

Query: 8   MSCALEEAQNAALRNEIP-----VGAVAVLNNKIISRAGNRNRELKDVTAH-AEILAIRM 61
           M  A+E  + A      P     VGA  +L N  I    N+       +   AE  AI  
Sbjct: 49  MEIAIEARKKAYA----PYSKFKVGAAILLENGEIVSGSNQENASY-PSGLCAERTAIYY 103

Query: 62  GCRILSQEILPEVDLYV------TLEPCTMCAAAISLA 93
                    +  + +        TLEP   C  A   A
Sbjct: 104 AGAKYPNVKIVNMAITAASENQETLEPIPPC-GACRQA 140


>gi|325180064|emb|CCA14465.1| RAC family serine/threonineprotein kinase putative [Albugo
           laibachii Nc14]
          Length = 1140

 Score = 39.9 bits (93), Expect = 0.11,   Method: Composition-based stats.
 Identities = 21/101 (20%), Positives = 30/101 (29%), Gaps = 33/101 (32%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIP---VGAVAV-LNNKIISRAGN-------------- 42
           +   + FMS A   A  +      P   VGA  V    KI+    N              
Sbjct: 84  LNWNDYFMSVAFLSAMRSKD----PSTQVGACIVNREKKIVGIGYNGFPNGCDDDDLPWA 139

Query: 43  RNRELKDVTA-------HAEILAIRMGCRILSQEILPEVDL 76
           R     D+ A       HAE+ AI       +   +    +
Sbjct: 140 RKNSGDDILATKYPYVCHAEMNAILN----KNSADVDGCTV 176


>gi|156372698|ref|XP_001629173.1| predicted protein [Nematostella vectensis]
 gi|156216167|gb|EDO37110.1| predicted protein [Nematostella vectensis]
          Length = 511

 Score = 39.9 bits (93), Expect = 0.11,   Method: Composition-based stats.
 Identities = 16/95 (16%), Positives = 27/95 (28%), Gaps = 22/95 (23%)

Query: 26  VGAVAVLNNKIISRAGNRNREL---KDVTA-----------------HAEILAIRMGCRI 65
           VGAV +  N I+    N         D                    H E   I    R 
Sbjct: 364 VGAVILKENSIVGAGWNCYTSDALYGDFPRAASKHVHIKNKRYPFSIHGEQSVILH--RF 421

Query: 66  LSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
           ++        ++V   PC  C   +    ++ + +
Sbjct: 422 VTDIKDESTTIFVNKMPCDECVPLMLRVGVKNVVF 456



 Score = 37.6 bits (87), Expect = 0.54,   Method: Composition-based stats.
 Identities = 14/68 (20%), Positives = 31/68 (45%), Gaps = 11/68 (16%)

Query: 33  NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISL 92
           +++I+    + +        HA   A+     I +        +YV+ +PCT C   ++ 
Sbjct: 139 DDQIVGMDFSHDNM------HAVTSAL-----IGNPIRARGGTVYVSRKPCTFCIKLLAE 187

Query: 93  ARIRRLYY 100
            +I+R++Y
Sbjct: 188 LKIKRIFY 195


>gi|17551074|ref|NP_509384.1| CytiDine Deaminase family member (cdd-1) [Caenorhabditis elegans]
 gi|1465863|gb|AAB04993.1| Cytidine deaminase protein 1 [Caenorhabditis elegans]
          Length = 158

 Score = 39.9 bits (93), Expect = 0.11,   Method: Composition-based stats.
 Identities = 18/81 (22%), Positives = 28/81 (34%), Gaps = 3/81 (3%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG---CRILSQEILPEVDLYVTLEP 82
           VGA  V ++  I    N        T  AE  AI           + I+   +L     P
Sbjct: 35  VGAALVCDDGEIIIGANHENASYGATICAERSAIVTALTKGHRKFKYIVVATELEAPCSP 94

Query: 83  CTMCAAAISLARIRRLYYGAS 103
           C +C   +      ++  G+S
Sbjct: 95  CGVCRQVLIEFGDYKVILGSS 115


>gi|212538085|ref|XP_002149198.1| tRNA-specific adenosine-34 deaminase subunit Tad3, putative
           [Penicillium marneffei ATCC 18224]
 gi|210068940|gb|EEA23031.1| tRNA-specific adenosine-34 deaminase subunit Tad3, putative
           [Penicillium marneffei ATCC 18224]
          Length = 512

 Score = 39.9 bits (93), Expect = 0.12,   Method: Composition-based stats.
 Identities = 14/49 (28%), Positives = 26/49 (53%), Gaps = 4/49 (8%)

Query: 60  RMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGG 108
           R+  R     +  ++D+Y+T EPC  C+  + L+R R + +    P+ G
Sbjct: 375 RILSRAAGGYLCTDLDIYITHEPCLACSMGMLLSRFRAITF----PRRG 419


>gi|322392140|ref|ZP_08065602.1| cytidine deaminase [Streptococcus peroris ATCC 700780]
 gi|321145040|gb|EFX40439.1| cytidine deaminase [Streptococcus peroris ATCC 700780]
          Length = 129

 Score = 39.9 bits (93), Expect = 0.12,   Method: Composition-based stats.
 Identities = 22/88 (25%), Positives = 33/88 (37%), Gaps = 6/88 (6%)

Query: 9  SCALEEAQNAALR-NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
            A+E ++ A +  +  P+GAV V N+  I    N       +T   E  AI        
Sbjct: 8  DLAIETSKQAYVPYSHFPIGAVLVANDGSIYTGVNIENASFSLTNCGERTAIFKAVSE-G 66

Query: 68 QEILPEVDLYVTLE----PCTMCAAAIS 91
          Q    E+ +Y   E    PC  C   + 
Sbjct: 67 QRDFSELIVYGETERPISPCGACRQVMV 94


>gi|303321940|ref|XP_003070964.1| Cytidine and deoxycytidylate deaminase zinc-binding domain
           containing protein [Coccidioides posadasii C735 delta
           SOWgp]
 gi|240110661|gb|EER28819.1| Cytidine and deoxycytidylate deaminase zinc-binding domain
           containing protein [Coccidioides posadasii C735 delta
           SOWgp]
          Length = 456

 Score = 39.9 bits (93), Expect = 0.12,   Method: Composition-based stats.
 Identities = 13/35 (37%), Positives = 19/35 (54%)

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
              +   +D+YVT EPC  CA  + L+R R +  G
Sbjct: 366 GGYLCTSLDVYVTHEPCLCCAMGMLLSRFRTVVVG 400


>gi|119196169|ref|XP_001248688.1| hypothetical protein CIMG_02459 [Coccidioides immitis RS]
          Length = 453

 Score = 39.9 bits (93), Expect = 0.12,   Method: Composition-based stats.
 Identities = 13/35 (37%), Positives = 19/35 (54%)

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG 101
              +   +D+YVT EPC  CA  + L+R R +  G
Sbjct: 363 GGYLCTSLDVYVTHEPCLCCAMGMLLSRFRTVVVG 397


>gi|145231731|ref|XP_001399339.1| DRAP deaminase [Aspergillus niger CBS 513.88]
 gi|134056243|emb|CAK37500.1| unnamed protein product [Aspergillus niger]
          Length = 240

 Score = 39.9 bits (93), Expect = 0.12,   Method: Composition-based stats.
 Identities = 33/174 (18%), Positives = 57/174 (32%), Gaps = 50/174 (28%)

Query: 4   GNVFMSCALEEAQNAALRNEIP----VGAVAV-----------LNNKIISRAGNRNRELK 48
              +M+  L  A+ A      P    VGA+ +            ++ ++S          
Sbjct: 18  HLHYMTQCLALARKAPAL---PTNFRVGALLLSRSTTDTTPTYSSDILLSTGYTMELAGN 74

Query: 49  DVTAHAEILAIRMGCRILSQEI------LPE------VDLYVTLEPC-------TMCAAA 89
               HAE   +     +           LP       + +YVT+EPC         C   
Sbjct: 75  ---THAEQCCLSNYASVHGVPDEQVHTVLPHNDPERKLVMYVTMEPCGKRLSGNAPCVER 131

Query: 90  ISLAR-------IRRLYYGASNPKGGGIEN-GTQFYTLATCHHSPEIYPGISEQ 135
           I   R       I+++Y+G   P     E+ G +    A      E+ PG+ ++
Sbjct: 132 IINTRQGGEGRGIQKVYFGVKEPGTFVGESEGVRRLEEAGVEW--EVVPGLEKE 183


>gi|307706398|ref|ZP_07643209.1| cytidine deaminase [Streptococcus mitis SK321]
 gi|307618214|gb|EFN97370.1| cytidine deaminase [Streptococcus mitis SK321]
          Length = 129

 Score = 39.9 bits (93), Expect = 0.12,   Method: Composition-based stats.
 Identities = 22/83 (26%), Positives = 32/83 (38%), Gaps = 6/83 (7%)

Query: 9  SCALEEAQNAALR-NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
            A+E ++ A +  +  PVGAV V  +  I    N       +T   E  AI        
Sbjct: 8  ELAIETSKKAYVPYSHFPVGAVLVAKDGNIYTGVNIENASYSLTNCGERTAIFKAVSEGQ 67

Query: 68 QEILPEVDLYVTLE----PCTMC 86
          +E   E+ +Y   E    PC  C
Sbjct: 68 RE-FSELIVYGQTEKPISPCGAC 89


>gi|15646114|ref|NP_208296.1| riboflavin biosynthesis protein (ribG) [Helicobacter pylori 26695]
 gi|2314679|gb|AAD08541.1| riboflavin biosynthesis protein (ribG) [Helicobacter pylori 26695]
          Length = 344

 Score = 39.9 bits (93), Expect = 0.12,   Method: Composition-based stats.
 Identities = 29/148 (19%), Positives = 47/148 (31%), Gaps = 45/148 (30%)

Query: 1   MKKGNVFMSCALEEAQN----AALRNEIP-VGA-VAVLNNKIISRAGNRNRELKDVTAHA 54
           M+     +   L +A      A      P V   V   N++I+S         K  T HA
Sbjct: 1   MRLYESLLEMCLNKAWEHQTLALEN---PSVACMVLDKNHEILS----LETHKKAKTPHA 53

Query: 55  EILAIRMGCRIL------------------------SQEILPEVDLYVTLEPC------T 84
           E+LA +   +IL                              +    +TLEPC       
Sbjct: 54  EVLAAQSALKILRPSLKNDLEKLEDPKTLSDFLKTHHDNAFTDCVFLITLEPCNSYGKTP 113

Query: 85  MCAAAISLARIRRLYYGAS--NPKGGGI 110
            C+  + + + +R+         K GG+
Sbjct: 114 ACSELLEILKPKRVVIATEENEAKKGGL 141


>gi|167723579|ref|ZP_02406815.1| riboflavin biosynthesis protein RibD [Burkholderia pseudomallei
          DM98]
          Length = 63

 Score = 39.9 bits (93), Expect = 0.12,   Method: Composition-based stats.
 Identities = 13/60 (21%), Positives = 20/60 (33%), Gaps = 6/60 (10%)

Query: 4  GNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
              M+ AL  A+           VG V     + +    +R         HAE+ A+R 
Sbjct: 8  DRTHMAHALRLAEQGLYTTHPNPRVGCVIARGARTLGAGWHRRAGE----PHAEVHALRE 63


>gi|150025452|ref|YP_001296278.1| cytidine deaminase [Flavobacterium psychrophilum JIP02/86]
 gi|149771993|emb|CAL43469.1| Cytidine deaminase [Flavobacterium psychrophilum JIP02/86]
          Length = 160

 Score = 39.9 bits (93), Expect = 0.13,   Method: Composition-based stats.
 Identities = 22/101 (21%), Positives = 34/101 (33%), Gaps = 18/101 (17%)

Query: 5   NVFMSCALEEAQNAALRNEIP-----VGAVAVLNNKIISRAGNRNRELKDVTAH-AEILA 58
           N  M  A+E  +NA      P     VGA  +L+N  ++   N+       +   AE +A
Sbjct: 24  NELMQKAIEIRKNAYA----PYSKFNVGAAILLDNGKVALGSNQENAAY-PSGLCAERVA 78

Query: 59  IRMGCRILSQEIL------PEVDLYVTLEPCTMCAAAISLA 93
           I     I     +             T +P   C  A   +
Sbjct: 79  IFHAGAIYPNAKIIKMAITAGSTKTATTKPIPPC-GACRQS 118


>gi|149030190|gb|EDL85246.1| rCG52125, isoform CRA_f [Rattus norvegicus]
          Length = 243

 Score = 39.9 bits (93), Expect = 0.13,   Method: Composition-based stats.
 Identities = 14/45 (31%), Positives = 20/45 (44%)

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNP 105
               I     L   DLY + +PC+ C   I  A + R+ Y  S+P
Sbjct: 17  QIALIKHGSRLKNCDLYFSRKPCSACLKMIVNAGVNRISYWPSDP 61


>gi|284504113|ref|YP_003406828.1| nucleoside deaminase [Marseillevirus]
 gi|282935551|gb|ADB03866.1| nucleoside deaminase [Marseillevirus]
          Length = 81

 Score = 39.9 bits (93), Expect = 0.13,   Method: Composition-based stats.
 Identities = 12/57 (21%), Positives = 26/57 (45%), Gaps = 8/57 (14%)

Query: 10 CALEEAQNAALRNEIPVGAVAVLNNKIISRAGNR-----NRELKDVTAHAEILAIRM 61
           A+++A+ + +  +  +G + V+  + +S   NR              HAE+ A+R 
Sbjct: 14 LAIQQAEKSEMSQK--IGCIVVMGGRPVSFGYNRDMDGFVLGTH-CRMHAEMCALRR 67


>gi|47497547|dbj|BAD19619.1| putative riboflavin biosynthesis protein ribD [Oryza sativa
           Japonica Group]
 gi|47847589|dbj|BAD21976.1| putative riboflavin biosynthesis protein ribD [Oryza sativa
           Japonica Group]
          Length = 622

 Score = 39.9 bits (93), Expect = 0.13,   Method: Composition-based stats.
 Identities = 21/107 (19%), Positives = 34/107 (31%), Gaps = 26/107 (24%)

Query: 26  VGAVAVL-----NNK---IISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLY 77
            G V        +N    ++             T  AE+LA +        E       Y
Sbjct: 77  FGCVIARPQLETDNAEAWVVGEGF----LYAQGTPCAELLAAQEAG-----EHARGATAY 127

Query: 78  VTLEP--CT---MCAAAISLARIRRLYYGASNP----KGGGIENGTQ 115
           + LEP  C       + +  A I R+  G  +P    +G  I++   
Sbjct: 128 LNLEPGDCYGDSTAVSTLVQAGITRVVVGLRHPLKHLRGKAIQSLRN 174


>gi|6822155|emb|CAB71026.1| riboflavin-specific deaminase / reductase [Helicobacter pylori]
          Length = 344

 Score = 39.9 bits (93), Expect = 0.13,   Method: Composition-based stats.
 Identities = 28/148 (18%), Positives = 46/148 (31%), Gaps = 45/148 (30%)

Query: 1   MKKGNVFMSCALEEAQN----AALRNEIP-VGA-VAVLNNKIISRAGNRNRELKDVTAHA 54
           M+     +   L +A      A      P V   V   +++I+S         K  T HA
Sbjct: 1   MRLYESLLEICLNKAWEHQTLALEN---PSVACMVLDKHHEILS----LETHKKAKTPHA 53

Query: 55  EILAIRMGCRIL------------------------SQEILPEVDLYVTLEPC------T 84
           E+LA +   +IL                              +    +TLEPC       
Sbjct: 54  EVLAAQSALKILRPSLKNDLEKLEDPKTLSDFLKTHHDNAFKDCVFLITLEPCNSYGKTP 113

Query: 85  MCAAAISLARIRRLYYGAS--NPKGGGI 110
            C+  + + + +R+         K GG 
Sbjct: 114 ACSGLLDILKPKRVVIATEENEAKKGGF 141


>gi|254780015|ref|YP_003058122.1| Riboflavin biosynthesis protein RibD [Helicobacter pylori B38]
 gi|254001928|emb|CAX30181.1| Riboflavin biosynthesis protein RibD [Helicobacter pylori B38]
          Length = 344

 Score = 39.5 bits (92), Expect = 0.14,   Method: Composition-based stats.
 Identities = 29/148 (19%), Positives = 48/148 (32%), Gaps = 45/148 (30%)

Query: 1   MKKGNVFMSCALEEAQN----AALRNEIP-VGA-VAVLNNKIISRAGNRNRELKDVTAHA 54
           M+     +   L +A      A      P V   V   N++I+S         K  T+HA
Sbjct: 1   MRLYESLLEICLNKAWEHQTLALEN---PSVACMVLDKNHEILS----LETHKKAKTSHA 53

Query: 55  EILAIRMGCRIL------------------------SQEILPEVDLYVTLEPC------T 84
           E+LA +   +IL                              +    +TLEPC       
Sbjct: 54  EVLAAKSALKILRPHLKNDLEKLEDPKILSDFLKTRHDNAFTDCVFLITLEPCNSYGKTP 113

Query: 85  MCAAAISLARIRRLYYGAS--NPKGGGI 110
            C+  + + + +R+         K GG+
Sbjct: 114 ACSELLEILKPKRVVIATEENEAKKGGL 141


>gi|322804416|emb|CBZ01966.1| dcmp deaminase [Clostridium botulinum H04402 065]
          Length = 162

 Score = 39.5 bits (92), Expect = 0.14,   Method: Composition-based stats.
 Identities = 22/118 (18%), Positives = 37/118 (31%), Gaps = 40/118 (33%)

Query: 26  VGAVAVLNNKIISRAG--------N-------RNRELKDVTA---------HAEILAIRM 61
             A+ V N++I++           N       +  ELK             HAE  AI  
Sbjct: 28  FAAIIVKNDEIMATGYTGAPRGRKNCCDLGYCKREELKVPRGTRYELCRSVHAEQNAIIS 87

Query: 62  GCRILSQEILPEVDLYVTLE------------PCTMCAAAISLARIRRLYYGASNPKG 107
             R      +    +Y+  +            PC++C   I  + I ++    S  K 
Sbjct: 88  ARRQ----DMIASTMYLVGKEYSTGKYVVNTAPCSLCKRFIINSGIDKVVIRDSKEKF 141


>gi|28210070|ref|NP_781014.1| come operon protein 2 [Clostridium tetani E88]
 gi|28202505|gb|AAO34951.1| come operon protein 2 [Clostridium tetani E88]
          Length = 162

 Score = 39.5 bits (92), Expect = 0.14,   Method: Composition-based stats.
 Identities = 21/111 (18%), Positives = 36/111 (32%), Gaps = 40/111 (36%)

Query: 26  VGAVAVLNNKIISRAGN--------------RNRELKDVTA----------HAEILAIRM 61
             A+ V N++I++   +                R+  +V            HAE  AI  
Sbjct: 28  FAAIIVKNDEIMATGYSGSPRGRKNCCDMGVCRRKELNVPRGTRYELCRSVHAEQNAIIS 87

Query: 62  GCRILSQEILPEVDLYV------TLE------PCTMCAAAISLARIRRLYY 100
             R      +    +Y+      T E      PC++C   I  A I ++  
Sbjct: 88  ARRQ----DMINSTMYLVGKERETGELVKHAAPCSLCKRFIINAGIDKVII 134


>gi|12843982|dbj|BAB26191.1| unnamed protein product [Mus musculus]
          Length = 404

 Score = 39.5 bits (92), Expect = 0.14,   Method: Composition-based stats.
 Identities = 14/45 (31%), Positives = 20/45 (44%)

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNP 105
               I     L   DLY + +PC+ C   I  A + R+ Y  S+P
Sbjct: 17  QIALIKHGSRLKNCDLYFSRKPCSACLKMIVNAGVNRISYWPSDP 61


>gi|148378152|ref|YP_001252693.1| cytidine/deoxycytidylate deaminase family protein [Clostridium
           botulinum A str. ATCC 3502]
 gi|153933669|ref|YP_001382553.1| cytidine/deoxycytidylate deaminase family protein [Clostridium
           botulinum A str. ATCC 19397]
 gi|153937331|ref|YP_001386105.1| cytidine/deoxycytidylate deaminase family protein [Clostridium
           botulinum A str. Hall]
 gi|153938472|ref|YP_001389509.1| cytidine/deoxycytidylate deaminase family protein [Clostridium
           botulinum F str. Langeland]
 gi|168177479|ref|ZP_02612143.1| cytidine/deoxycytidylate deaminase family protein [Clostridium
           botulinum NCTC 2916]
 gi|170756041|ref|YP_001779774.1| cytidine/deoxycytidylate deaminase family protein [Clostridium
           botulinum B1 str. Okra]
 gi|226947370|ref|YP_002802461.1| cytidine/deoxycytidylate deaminase family protein [Clostridium
           botulinum A2 str. Kyoto]
 gi|148287636|emb|CAL81701.1| putative zinc-binding protein [Clostridium botulinum A str. ATCC
           3502]
 gi|152929713|gb|ABS35213.1| cytidine/deoxycytidylate deaminase family protein [Clostridium
           botulinum A str. ATCC 19397]
 gi|152933245|gb|ABS38744.1| cytidine/deoxycytidylate deaminase family protein [Clostridium
           botulinum A str. Hall]
 gi|152934368|gb|ABS39866.1| cytidine/deoxycytidylate deaminase family protein [Clostridium
           botulinum F str. Langeland]
 gi|169121253|gb|ACA45089.1| cytidine/deoxycytidylate deaminase family protein [Clostridium
           botulinum B1 str. Okra]
 gi|182670481|gb|EDT82455.1| cytidine/deoxycytidylate deaminase family protein [Clostridium
           botulinum NCTC 2916]
 gi|226844392|gb|ACO87058.1| cytidine/deoxycytidylate deaminase family protein [Clostridium
           botulinum A2 str. Kyoto]
 gi|295317610|gb|ADF97987.1| cytidine/deoxycytidylate deaminase family protein [Clostridium
           botulinum F str. 230613]
          Length = 162

 Score = 39.5 bits (92), Expect = 0.14,   Method: Composition-based stats.
 Identities = 22/118 (18%), Positives = 37/118 (31%), Gaps = 40/118 (33%)

Query: 26  VGAVAVLNNKIISRAG--------N-------RNRELKDVTA---------HAEILAIRM 61
             A+ V N++I++           N       +  ELK             HAE  AI  
Sbjct: 28  FAAIIVKNDEIMATGYTGAPRGRKNCCDLGYCKREELKVPRGTRYELCRSVHAEQNAIIS 87

Query: 62  GCRILSQEILPEVDLYVTLE------------PCTMCAAAISLARIRRLYYGASNPKG 107
             R      +    +Y+  +            PC++C   I  + I ++    S  K 
Sbjct: 88  ARRQ----DMIASTMYLVGKEYSTGKYVVNTAPCSLCKRFIINSGIDKVVIRDSKEKF 141


>gi|170079552|ref|YP_001736186.1| hypothetical protein SYNPCC7002_E0039 [Synechococcus sp. PCC 7002]
 gi|169887221|gb|ACB00931.1| Conserved hypothetical protein, with zinc-binding domain
           [Synechococcus sp. PCC 7002]
          Length = 624

 Score = 39.5 bits (92), Expect = 0.14,   Method: Composition-based stats.
 Identities = 19/84 (22%), Positives = 32/84 (38%), Gaps = 6/84 (7%)

Query: 45  RELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY---- 100
            ++   + HAE  A     +   + I     L+ T  PC +C+       I+++ Y    
Sbjct: 481 NQVHTRSLHAEENAFLQITKYGGEGI-EGGILFTTASPCELCSKKAYQLGIKKIVYIDPY 539

Query: 101 -GASNPKGGGIENGTQFYTLATCH 123
            G +N     I N +Q   L   H
Sbjct: 540 PGIANEHILSIGNDSQRPELQLFH 563


>gi|26328409|dbj|BAC27943.1| unnamed protein product [Mus musculus]
          Length = 383

 Score = 39.5 bits (92), Expect = 0.15,   Method: Composition-based stats.
 Identities = 14/45 (31%), Positives = 20/45 (44%)

Query: 61  MGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNP 105
               I     L   DLY + +PC+ C   I  A + R+ Y  S+P
Sbjct: 17  QIALIKHGSRLKNCDLYFSRKPCSACLKMIVNAGVNRISYWPSDP 61


>gi|317182710|dbj|BAJ60494.1| riboflavin biosynthesis protein [Helicobacter pylori F57]
          Length = 344

 Score = 39.5 bits (92), Expect = 0.16,   Method: Composition-based stats.
 Identities = 28/148 (18%), Positives = 47/148 (31%), Gaps = 45/148 (30%)

Query: 1   MKKGNVFMSCALEEAQN----AALRNEIP-VGA-VAVLNNKIISRAGNRNRELKDVTAHA 54
           M+     +   L +A      A      P V   V   +++I+S         K  T HA
Sbjct: 1   MRLYESLLEICLNKAWEHQTLALEN---PSVACMVLDKHHEILS----LETHKKAKTPHA 53

Query: 55  EILAIRMGCRIL------------------------SQEILPEVDLYVTLEPC------T 84
           E+LA +   +IL                              +    +TLEPC       
Sbjct: 54  EVLAAKSALKILRPSLKNDLEKLEDPKTLSDFLKTHHDNAFKDCVFLITLEPCNSYGKTP 113

Query: 85  MCAAAISLARIRRLYYGAS--NPKGGGI 110
            C+  + + + +R+         K GG+
Sbjct: 114 ACSGLLEILKPKRVVIATEENEAKKGGL 141


>gi|170761186|ref|YP_001785475.1| cytidine/deoxycytidylate deaminase family protein [Clostridium
           botulinum A3 str. Loch Maree]
 gi|169408175|gb|ACA56586.1| cytidine/deoxycytidylate deaminase family protein [Clostridium
           botulinum A3 str. Loch Maree]
          Length = 162

 Score = 39.5 bits (92), Expect = 0.16,   Method: Composition-based stats.
 Identities = 22/118 (18%), Positives = 37/118 (31%), Gaps = 40/118 (33%)

Query: 26  VGAVAVLNNKIISRAG--------N-------RNRELKDVTA---------HAEILAIRM 61
             A+ V N++I++           N       +  ELK             HAE  AI  
Sbjct: 28  FAAIIVKNDEIMATGYTGAPRGRKNCCDLGYCKREELKVPRGTRYELCRSVHAEQNAIIS 87

Query: 62  GCRILSQEILPEVDLYVTLE------------PCTMCAAAISLARIRRLYYGASNPKG 107
             R      +    +Y+  +            PC++C   I  + I ++    S  K 
Sbjct: 88  ARRQ----DMIASTMYLVGKEYSTGKYVANTAPCSLCKRFIINSGIDKVVIRDSKEKF 141


>gi|257059142|ref|YP_003137030.1| CMP/dCMP deaminase zinc-binding [Cyanothece sp. PCC 8802]
 gi|256589308|gb|ACV00195.1| CMP/dCMP deaminase zinc-binding [Cyanothece sp. PCC 8802]
          Length = 144

 Score = 39.5 bits (92), Expect = 0.16,   Method: Composition-based stats.
 Identities = 11/29 (37%), Positives = 17/29 (58%)

Query: 72  PEVDLYVTLEPCTMCAAAISLARIRRLYY 100
               +YVTLEPC  C   +  A I++++Y
Sbjct: 65  EGAMIYVTLEPCISCLKLVISAGIKQVFY 93


>gi|255525826|ref|ZP_05392755.1| CMP/dCMP deaminase zinc-binding [Clostridium carboxidivorans P7]
 gi|255510469|gb|EET86780.1| CMP/dCMP deaminase zinc-binding [Clostridium carboxidivorans P7]
          Length = 162

 Score = 39.5 bits (92), Expect = 0.16,   Method: Composition-based stats.
 Identities = 22/111 (19%), Positives = 36/111 (32%), Gaps = 40/111 (36%)

Query: 26  VGAVAVLNNKIISRAG--------NRN------RELKDVTA----------HAEILAIRM 61
             A+ V N++II+           N        RE  +V            HAE  AI  
Sbjct: 28  FAAIIVKNDEIIATGYTGAPRGRKNCCDLGYCKREHLNVPRGTRYELCRSVHAEQNAI-- 85

Query: 62  GCRILSQEILPEVDLYV------TLE------PCTMCAAAISLARIRRLYY 100
                 ++ +    +Y+      T E      PC +C   I  + I ++  
Sbjct: 86  --ISSRRQDMIGTTMYLVGKEHKTGEYVNNASPCALCKRFIINSGIEKVII 134


>gi|188590082|ref|YP_001919888.1| deoxycytidylate deaminase [Clostridium botulinum E3 str. Alaska
           E43]
 gi|188500363|gb|ACD53499.1| deoxycytidylate deaminase [Clostridium botulinum E3 str. Alaska
           E43]
          Length = 164

 Score = 39.5 bits (92), Expect = 0.17,   Method: Composition-based stats.
 Identities = 20/110 (18%), Positives = 32/110 (29%), Gaps = 40/110 (36%)

Query: 27  GAVAVLNNKIIS-------RAGNRNRELKDVTA-----------------HAEILAIRMG 62
           G++ V N++IIS       R  +   ++                      H+E  AI   
Sbjct: 29  GSIIVKNDEIISTGYTGAPRGRSNCIDINSCIREKLQVPRGTHYELCRSVHSEANAIISA 88

Query: 63  CRILSQEILPEVDLYVTLE------------PCTMCAAAISLARIRRLYY 100
            R      +    LY+                C+MC   I  A I  +  
Sbjct: 89  SRR----DMIGATLYLVGRDAKTREYVENANSCSMCKRLIINAGISYVVI 134


>gi|308185276|ref|YP_003929409.1| riboflavin biosynthesis protein (ribG) [Helicobacter pylori SJM180]
 gi|308061196|gb|ADO03092.1| riboflavin biosynthesis protein (ribG) [Helicobacter pylori SJM180]
          Length = 344

 Score = 39.5 bits (92), Expect = 0.17,   Method: Composition-based stats.
 Identities = 29/148 (19%), Positives = 47/148 (31%), Gaps = 45/148 (30%)

Query: 1   MKKGNVFMSCALEEAQN----AALRNEIP-VGA-VAVLNNKIISRAGNRNRELKDVTAHA 54
           M+     +   L +A      A      P V   V   N++I+S         K  T HA
Sbjct: 1   MRLYENLLEICLNKAWEYQTLALEN---PSVACMVLDKNHEILS----LETHKKAKTPHA 53

Query: 55  EILAIRMGCRIL------------------------SQEILPEVDLYVTLEPC------T 84
           E+LA +   +IL                              +    +TLEPC       
Sbjct: 54  EVLAAKSALKILRPSLKNDLEKLEDPKTLSDFLKTHHDNAFTDCVFLITLEPCNSYGKTP 113

Query: 85  MCAAAISLARIRRLYYGAS--NPKGGGI 110
            C+  + + + +R+         K GG+
Sbjct: 114 ACSELLEILKPKRVVIATEENEAKKGGL 141


>gi|16125138|ref|NP_419702.1| riboflavin biosynthesis protein RibD [Caulobacter crescentus CB15]
 gi|221233866|ref|YP_002516302.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Caulobacter crescentus NA1000]
 gi|13422148|gb|AAK22870.1| riboflavin biosynthesis protein RibD [Caulobacter crescentus CB15]
 gi|220963038|gb|ACL94394.1| diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Caulobacter crescentus NA1000]
          Length = 331

 Score = 39.5 bits (92), Expect = 0.18,   Method: Composition-based stats.
 Identities = 25/132 (18%), Positives = 43/132 (32%), Gaps = 18/132 (13%)

Query: 25  PVGAVAVLN-NKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPC 83
           PVG V +    + ++ A ++        A     A    CR        +  L VTLEPC
Sbjct: 35  PVGCVVLDAAGETLAVAAHQRAGQAHAEA-----AALAACRERGAAARID-TLLVTLEPC 88

Query: 84  ------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRS 137
                   C  AI  +  R ++    +P       G      A           ++   +
Sbjct: 89  NHHGRTPPCVEAILASPARTVWIAVRDPNLAVAGGGAARLEAAGL--EVRFLSDLAHPEA 146

Query: 138 RQIIQDFFKERR 149
             +++   + RR
Sbjct: 147 SDLVR---RARR 155


>gi|317013277|gb|ADU83885.1| riboflavin biosynthesis protein [Helicobacter pylori Lithuania75]
          Length = 344

 Score = 39.1 bits (91), Expect = 0.18,   Method: Composition-based stats.
 Identities = 29/148 (19%), Positives = 48/148 (32%), Gaps = 45/148 (30%)

Query: 1   MKKGNVFMSCALEEAQN----AALRNEIP-VGA-VAVLNNKIISRAGNRNRELKDVTAHA 54
           M+     +   L +A      A      P V   V   +++I+S         K  T HA
Sbjct: 1   MRLYESLLEICLNKAWEYQTLALEN---PSVACMVLDKHHEILS----LETHKKAKTPHA 53

Query: 55  EILAIRMGCRIL------------------------SQEILPEVDLYVTLEPC------T 84
           E+LA +   +IL                              +    +TLEPC       
Sbjct: 54  EVLAAQSALKILRPHLKNDLEKLEDPKTLSDFLKKHHNNAFTDCVFLITLEPCNSYGKTP 113

Query: 85  MCAAAISLARIRRLYYGAS--NPKGGGI 110
            C+  + + + +R+   A     K GG+
Sbjct: 114 ACSELLEILKPKRVVIAAEENEAKKGGL 141


>gi|284991537|ref|YP_003410091.1| riboflavin biosynthesis protein RibD [Geodermatophilus obscurus
          DSM 43160]
 gi|284064782|gb|ADB75720.1| riboflavin biosynthesis protein RibD [Geodermatophilus obscurus
          DSM 43160]
          Length = 358

 Score = 39.1 bits (91), Expect = 0.18,   Method: Composition-based stats.
 Identities = 20/78 (25%), Positives = 26/78 (33%), Gaps = 26/78 (33%)

Query: 26 VGAVAVL-NNKIISRAGNRNRELKDVTA-----HAEILAIRMGCRILSQEILPEVDLYVT 79
          VGAV +  +   +             TA     HAE+ A+         E        VT
Sbjct: 31 VGAVVLAADGTPVGEG---------ATAPPGGPHAEVRALEQAG-----ERACGGTAVVT 76

Query: 80 LEPCTM------CAAAIS 91
          LEPC        CA A+ 
Sbjct: 77 LEPCAHTGRTGPCADALL 94


>gi|325676732|ref|ZP_08156406.1| riboflavin biosynthesis protein RibD [Rhodococcus equi ATCC 33707]
 gi|325552514|gb|EGD22202.1| riboflavin biosynthesis protein RibD [Rhodococcus equi ATCC 33707]
          Length = 263

 Score = 39.1 bits (91), Expect = 0.18,   Method: Composition-based stats.
 Identities = 13/77 (16%), Positives = 27/77 (35%), Gaps = 12/77 (15%)

Query: 80  LEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGIS 133
           LEPC        C+ A+  A I  ++Y  ++P                     E+  G+ 
Sbjct: 1   LEPCNHQGRTGPCSRALIDAGIAAVHYSVADPNPAAAGGADTLRAA-----RIEVTGGLL 55

Query: 134 EQRSRQ-IIQDFFKERR 149
              + +  ++ +   +R
Sbjct: 56  ADDAERGPLRAWLHRQR 72


>gi|226292529|gb|EEH47949.1| cytosine deaminase [Paracoccidioides brasiliensis Pb18]
          Length = 178

 Score = 39.1 bits (91), Expect = 0.18,   Method: Composition-based stats.
 Identities = 10/21 (47%), Positives = 12/21 (57%)

Query: 11  ALEEAQNAALRNEIPVGAVAV 31
           ALEEA+       +PVGA  V
Sbjct: 118 ALEEARKGLAEGSVPVGACLV 138


>gi|83770925|dbj|BAE61058.1| unnamed protein product [Aspergillus oryzae]
          Length = 489

 Score = 39.1 bits (91), Expect = 0.19,   Method: Composition-based stats.
 Identities = 11/38 (28%), Positives = 21/38 (55%)

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
            R     +  ++D+Y+T EPC  C+  + L+R R + +
Sbjct: 353 SRAQGGYLCTDLDVYLTHEPCLCCSMGLLLSRFRAIIF 390


>gi|298735524|ref|YP_003728045.1| riboflavin biosynthesis protein RibG [Helicobacter pylori B8]
 gi|298354709|emb|CBI65581.1| Riboflavin biosynthesis protein (RibG) [Helicobacter pylori B8]
          Length = 344

 Score = 39.1 bits (91), Expect = 0.19,   Method: Composition-based stats.
 Identities = 29/148 (19%), Positives = 48/148 (32%), Gaps = 45/148 (30%)

Query: 1   MKKGNVFMSCALEEAQN----AALRNEIP-VGA-VAVLNNKIISRAGNRNRELKDVTAHA 54
           M+     +   L +A      A      P V   V   +++I+S         K  T HA
Sbjct: 1   MRLYESLLEMCLNKAWEYQTLALEN---PSVACMVLDKHHEILS----LETHKKAKTPHA 53

Query: 55  EILAIRMGCRIL------------------------SQEILPEVDLYVTLEPC------T 84
           E+LA +   +IL                              +    +TLEPC       
Sbjct: 54  EVLAAKSALKILRPSLKNDLEKLEDPKTLSDFLKTHHDNAFKDCVFLITLEPCNSYGKTP 113

Query: 85  MCAAAISLARIRRLYYGAS--NPKGGGI 110
            C+  + + + +R+   A     K GG+
Sbjct: 114 ACSELLEILKPKRVVIAAEENEAKKGGL 141


>gi|220678190|emb|CAX13081.1| novel protein (zgc:101622) [Danio rerio]
          Length = 471

 Score = 39.1 bits (91), Expect = 0.19,   Method: Composition-based stats.
 Identities = 14/72 (19%), Positives = 27/72 (37%), Gaps = 11/72 (15%)

Query: 29  VAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAA 88
           V V   +++               HA  +A+     +     L   +LY + +PC+ C  
Sbjct: 81  VVVHECRVLG------LHCSSAQLHAGQVAV-----VKHGPRLKSCELYFSRKPCSTCLK 129

Query: 89  AISLARIRRLYY 100
            +  A + R+ Y
Sbjct: 130 MLINAGVSRISY 141



 Score = 36.8 bits (85), Expect = 1.0,   Method: Composition-based stats.
 Identities = 26/144 (18%), Positives = 44/144 (30%), Gaps = 38/144 (26%)

Query: 14  EAQNAALRNEIP---VGAVAVLNNK-----------IISRAGN----------------- 42
           +A+  A R E P   VGAV     K           ++    N                 
Sbjct: 320 QARLLACRTEDPKVGVGAVIWAEGKQSQCDGTGQLYLVGCGYNAYPVGSQYAEYPQMDHK 379

Query: 43  ---RNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLY 99
              R         HAE  A+      +  E      ++VT  PC  C   I  A I+++Y
Sbjct: 380 QEERQNRKYRYILHAEQNALTFRSAEIKAED--NTMMFVTKCPCDECVPLIGCAGIKQIY 437

Query: 100 YGASNPKGGGIENGTQFYTLATCH 123
              ++     +++   +      +
Sbjct: 438 --TTDLDSNKVKHDISYLRFNKLN 459


>gi|76798968|ref|ZP_00781169.1| ComE operon protein 2. [Streptococcus agalactiae 18RS21]
 gi|76585689|gb|EAO62246.1| ComE operon protein 2. [Streptococcus agalactiae 18RS21]
          Length = 74

 Score = 39.1 bits (91), Expect = 0.19,   Method: Composition-based stats.
 Identities = 15/47 (31%), Positives = 18/47 (38%), Gaps = 15/47 (31%)

Query: 26 VGAVAVLNNKIISRAGNRNRELKD---------------VTAHAEIL 57
          VGAV V NN+II+   N      D                T HAE+ 
Sbjct: 28 VGAVLVKNNRIIATGYNGGVSETDNCNEVGHYMEDGHCIRTVHAEMN 74


>gi|55925385|ref|NP_001007449.1| cytidine and dCMP deaminase domain-containing protein 1 [Danio
           rerio]
 gi|82179958|sp|Q5U3U4|CDAC1_DANRE RecName: Full=Cytidine and dCMP deaminase domain-containing protein
           1
 gi|55249993|gb|AAH85391.1| Cytidine and dCMP deaminase domain containing 1 [Danio rerio]
          Length = 471

 Score = 39.1 bits (91), Expect = 0.19,   Method: Composition-based stats.
 Identities = 14/72 (19%), Positives = 27/72 (37%), Gaps = 11/72 (15%)

Query: 29  VAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAA 88
           V V   +++               HA  +A+     +     L   +LY + +PC+ C  
Sbjct: 81  VVVHECRVLG------LHCSSAQLHAGQVAV-----VKHGPRLKSCELYFSRKPCSTCLK 129

Query: 89  AISLARIRRLYY 100
            +  A + R+ Y
Sbjct: 130 MLINAGVSRISY 141



 Score = 36.8 bits (85), Expect = 1.1,   Method: Composition-based stats.
 Identities = 26/144 (18%), Positives = 44/144 (30%), Gaps = 38/144 (26%)

Query: 14  EAQNAALRNEIP---VGAVAVLNNK-----------IISRAGN----------------- 42
           +A+  A R E P   VGAV     K           ++    N                 
Sbjct: 320 QARLLACRTEDPKVGVGAVIWAEGKQSQCDGTGQLYLVGCGYNAYPVGSQYAEYPQMDHK 379

Query: 43  ---RNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLY 99
              R         HAE  A+      +  E      ++VT  PC  C   I  A I+++Y
Sbjct: 380 QEERQNRKYRYILHAEQNALTFRSAEIKAED--NTMMFVTKCPCDECVPLIGCAGIKQIY 437

Query: 100 YGASNPKGGGIENGTQFYTLATCH 123
              ++     +++   +      +
Sbjct: 438 --TTDLDSNKVKHDISYLRFNKLN 459


>gi|20094371|ref|NP_614218.1| RNA-binding protein [Methanopyrus kandleri AV19]
 gi|238537840|pdb|3G8Q|A Chain A, A Cytidine Deaminase Edits C-To-U In Transfer Rnas In
           Archaea
 gi|238537841|pdb|3G8Q|B Chain B, A Cytidine Deaminase Edits C-To-U In Transfer Rnas In
           Archaea
 gi|238537842|pdb|3G8Q|C Chain C, A Cytidine Deaminase Edits C-To-U In Transfer Rnas In
           Archaea
 gi|238537843|pdb|3G8Q|D Chain D, A Cytidine Deaminase Edits C-To-U In Transfer Rnas In
           Archaea
 gi|19887439|gb|AAM02148.1| Predicted RNA-binding protein, contains THUMP domain [Methanopyrus
           kandleri AV19]
          Length = 278

 Score = 39.1 bits (91), Expect = 0.20,   Method: Composition-based stats.
 Identities = 21/82 (25%), Positives = 34/82 (41%), Gaps = 17/82 (20%)

Query: 22  NEIP---VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYV 78
           NEIP   V A  +   +I++       E  D   HAE   +R       +  +    ++V
Sbjct: 17  NEIPKRTVTAALLEGGEIVA-----VEEADD--EHAERKLVR-------RHDVEGKVVFV 62

Query: 79  TLEPCTMCAAAISLARIRRLYY 100
           T  PC  CA  ++ A +  + Y
Sbjct: 63  TARPCLYCARELAEAGVAGVVY 84


>gi|317137695|ref|XP_001727897.2| tRNA-specific adenosine-34 deaminase subunit Tad3 [Aspergillus
           oryzae RIB40]
          Length = 503

 Score = 39.1 bits (91), Expect = 0.20,   Method: Composition-based stats.
 Identities = 11/38 (28%), Positives = 21/38 (55%)

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
            R     +  ++D+Y+T EPC  C+  + L+R R + +
Sbjct: 367 SRAQGGYLCTDLDVYLTHEPCLCCSMGLLLSRFRAIIF 404


>gi|163760115|ref|ZP_02167198.1| hypothetical protein HPDFL43_07634 [Hoeflea phototrophica DFL-43]
 gi|162282514|gb|EDQ32802.1| hypothetical protein HPDFL43_07634 [Hoeflea phototrophica DFL-43]
          Length = 200

 Score = 39.1 bits (91), Expect = 0.20,   Method: Composition-based stats.
 Identities = 15/57 (26%), Positives = 27/57 (47%), Gaps = 2/57 (3%)

Query: 46  ELKDVTAHAEILAIRMG--CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
           E ++   H E+  ++      +  QE   ++    T EPC+MC +AI+ A     +Y
Sbjct: 56  ETENPLWHGEVHLLKCFYESPVSKQESTKDMIFLSTHEPCSMCMSAIAWAGFDNFFY 112


>gi|145355817|ref|XP_001422145.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144582385|gb|ABP00462.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 236

 Score = 39.1 bits (91), Expect = 0.21,   Method: Composition-based stats.
 Identities = 20/73 (27%), Positives = 33/73 (45%), Gaps = 3/73 (4%)

Query: 34  NKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEIL-PEVDLYVTLEPCTMCAAAISL 92
             + + A N N    +   HAE+  +       ++ ++ P+  L VTL+ C MCAA    
Sbjct: 146 GGVYAVAANTN--GGNAVLHAEMNLLFPADDARARRLIEPDTTLLVTLQCCRMCAARAVE 203

Query: 93  ARIRRLYYGASNP 105
             +RR  Y   +P
Sbjct: 204 LGVRRAAYLREDP 216


>gi|167537050|ref|XP_001750195.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163771357|gb|EDQ85025.1| predicted protein [Monosiga brevicollis MX1]
          Length = 169

 Score = 39.1 bits (91), Expect = 0.21,   Method: Composition-based stats.
 Identities = 9/45 (20%), Positives = 19/45 (42%), Gaps = 1/45 (2%)

Query: 86  CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYP 130
           CA A+  +R++R  +   N   G   +    +     +H  ++Y 
Sbjct: 121 CAMALVHSRVQRAVFQWPNA-TGSFASHFMMHAHPGLNHRFDVYE 164


>gi|327295701|ref|XP_003232545.1| hypothetical protein TERG_06536 [Trichophyton rubrum CBS 118892]
 gi|326464856|gb|EGD90309.1| hypothetical protein TERG_06536 [Trichophyton rubrum CBS 118892]
          Length = 446

 Score = 38.7 bits (90), Expect = 0.24,   Method: Composition-based stats.
 Identities = 16/61 (26%), Positives = 23/61 (37%)

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
              +   +DLYVT EPC  C+  + L+R R +    S  +     N          H   
Sbjct: 358 GGYLCTGLDLYVTHEPCICCSMGMLLSRFRSITVLNSGMRRSAESNALDAVNGYGLHWRE 417

Query: 127 E 127
           E
Sbjct: 418 E 418


>gi|161528979|ref|YP_001582805.1| CMP/dCMP deaminase zinc-binding [Nitrosopumilus maritimus SCM1]
 gi|160340280|gb|ABX13367.1| CMP/dCMP deaminase zinc-binding [Nitrosopumilus maritimus SCM1]
          Length = 120

 Score = 38.7 bits (90), Expect = 0.24,   Method: Composition-based stats.
 Identities = 27/119 (22%), Positives = 36/119 (30%), Gaps = 19/119 (15%)

Query: 17  NAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDL 76
           NA +  +  VGA  V     I    N   + +    HAE+ AI       S  +      
Sbjct: 11  NARVLGKTQVGAAVVSGEGKIFSGCNIEHKFRSHDIHAEVSAI-------SSLVSSGCTK 63

Query: 77  YVTLE---------PCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
              +          PC  C   I          G  N KGG I+   +F       H P
Sbjct: 64  LTAILVVAQRTQFTPCGSCMDWIFELGGSECVVGYQNEKGGDIK---KFLARDLMPHYP 119


>gi|164425586|ref|XP_960473.2| hypothetical protein NCU05511 [Neurospora crassa OR74A]
 gi|157070985|gb|EAA31237.2| conserved hypothetical protein [Neurospora crassa OR74A]
          Length = 229

 Score = 38.7 bits (90), Expect = 0.24,   Method: Composition-based stats.
 Identities = 15/70 (21%), Positives = 25/70 (35%), Gaps = 14/70 (20%)

Query: 45  RELKDVTAHAEILAIRMGCRILS------------QEILP--EVDLYVTLEPCTMCAAAI 90
            E +    H EI  I+    +                 +P  +   + T EPC++C + I
Sbjct: 56  NERESPLLHGEINCIQQYFALPPASFPEQGQEEEEGYRIPTKDTIFFATHEPCSLCLSGI 115

Query: 91  SLARIRRLYY 100
           + A     YY
Sbjct: 116 TWAGFNEFYY 125


>gi|182420308|ref|ZP_02951537.1| deoxycytidylate deaminase [Clostridium butyricum 5521]
 gi|237666732|ref|ZP_04526717.1| CMP/dCMP deaminase, zinc-binding [Clostridium butyricum E4 str.
           BoNT E BL5262]
 gi|182375903|gb|EDT73495.1| deoxycytidylate deaminase [Clostridium butyricum 5521]
 gi|237657931|gb|EEP55486.1| CMP/dCMP deaminase, zinc-binding [Clostridium butyricum E4 str.
           BoNT E BL5262]
          Length = 164

 Score = 38.7 bits (90), Expect = 0.25,   Method: Composition-based stats.
 Identities = 26/138 (18%), Positives = 42/138 (30%), Gaps = 47/138 (34%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIP---VGAVAVLNNKIISRAG--------------NRN 44
            K N +    L+ A+    R        G++ V N++IIS                 +  
Sbjct: 5   DKHNYY----LDIAETVLERGTCMRRNYGSIIVKNDEIISTGYTGAPRGRKNCIDLDSCI 60

Query: 45  RELKDVTA----------HAEILAIRMGCRILSQEILPEVDLYVTLE------------P 82
           RE  +V            H+E  AI    R      +    LY+  +             
Sbjct: 61  REKLNVPRGTHYELCRSVHSEANAIISASRR----DMIGATLYLVGKDAKTKKYVENANS 116

Query: 83  CTMCAAAISLARIRRLYY 100
           C+MC   I  + I  +  
Sbjct: 117 CSMCKRLIINSGISYVVI 134


>gi|242807574|ref|XP_002484984.1| tRNA-specific adenosine-34 deaminase subunit Tad3, putative
           [Talaromyces stipitatus ATCC 10500]
 gi|218715609|gb|EED15031.1| tRNA-specific adenosine-34 deaminase subunit Tad3, putative
           [Talaromyces stipitatus ATCC 10500]
          Length = 916

 Score = 38.7 bits (90), Expect = 0.26,   Method: Composition-based stats.
 Identities = 13/45 (28%), Positives = 24/45 (53%), Gaps = 4/45 (8%)

Query: 64  RILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGG 108
           R     +  ++D+Y+T EPC  C+  + L+R R + +    P+ G
Sbjct: 785 RAAGGYLCTDLDIYITHEPCLACSMGMLLSRFRAITF----PRRG 825


>gi|9632136|ref|NP_048952.1| hypothetical protein PBCV1_A596R [Paramecium bursaria Chlorella
           virus 1]
 gi|2447078|gb|AAC96936.1| similar to Vibrio fischeri dCMP deaminase, corresponds to
           Swiss-Prot Accession Number P33968 [Paramecium bursaria
           Chlorella virus 1]
          Length = 142

 Score = 38.7 bits (90), Expect = 0.26,   Method: Composition-based stats.
 Identities = 9/30 (30%), Positives = 14/30 (46%)

Query: 70  ILPEVDLYVTLEPCTMCAAAISLARIRRLY 99
            L    +  TL PC  C+  I  + IR++ 
Sbjct: 82  RLDGCSIITTLFPCKECSKLIIQSGIRKVI 111


>gi|77360199|ref|YP_339774.1| deoxycytidylate deaminase [Pseudoalteromonas haloplanktis TAC125]
 gi|76875110|emb|CAI86331.1| putative deoxycytidylate deaminase [Pseudoalteromonas haloplanktis
           TAC125]
          Length = 600

 Score = 38.7 bits (90), Expect = 0.27,   Method: Composition-based stats.
 Identities = 14/64 (21%), Positives = 24/64 (37%), Gaps = 3/64 (4%)

Query: 45  RELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASN 104
            ++   + HAE  A     +     I     L+ T  PC +CA       I+ + +   +
Sbjct: 493 NQVHTRSLHAEENAFLQIAKYGGVGI-EGGKLFTTASPCELCAKKAYQLGIKEIIF--ID 549

Query: 105 PKGG 108
           P  G
Sbjct: 550 PYPG 553


>gi|302510713|ref|XP_003017308.1| tRNA-specific adenosine-34 deaminase subunit Tad3, putative
           [Arthroderma benhamiae CBS 112371]
 gi|291180879|gb|EFE36663.1| tRNA-specific adenosine-34 deaminase subunit Tad3, putative
           [Arthroderma benhamiae CBS 112371]
          Length = 449

 Score = 38.7 bits (90), Expect = 0.27,   Method: Composition-based stats.
 Identities = 15/61 (24%), Positives = 24/61 (39%)

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
              +   +DLY+T EPC  C+  + L+R R +   +S  +     N          H   
Sbjct: 361 GGYLCTGLDLYITHEPCICCSMGMLLSRFRSITVLSSGMRRSAESNALDAVNGYGLHWRE 420

Query: 127 E 127
           E
Sbjct: 421 E 421


>gi|187777263|ref|ZP_02993736.1| hypothetical protein CLOSPO_00815 [Clostridium sporogenes ATCC
           15579]
 gi|187774191|gb|EDU37993.1| hypothetical protein CLOSPO_00815 [Clostridium sporogenes ATCC
           15579]
          Length = 166

 Score = 38.7 bits (90), Expect = 0.28,   Method: Composition-based stats.
 Identities = 22/118 (18%), Positives = 37/118 (31%), Gaps = 40/118 (33%)

Query: 26  VGAVAVLNNKIISRAG--------N-------RNRELKDVTA---------HAEILAIRM 61
             A+ V N++I++           N       +  ELK             HAE  AI  
Sbjct: 32  FAAIIVKNDEIMATGYAGAPRGRKNCCDLGYCKREELKVPRGTRYELCRSVHAEQNAIIS 91

Query: 62  GCRILSQEILPEVDLYVTLE------------PCTMCAAAISLARIRRLYYGASNPKG 107
             R      +    +Y+  +            PC++C   I  + I ++    S  K 
Sbjct: 92  ARRQ----DMIASTMYLVGKEYNTGKYVANAGPCSLCKRFIINSGIDKVVIRDSKEKF 145


>gi|322794640|gb|EFZ17648.1| hypothetical protein SINV_16526 [Solenopsis invicta]
          Length = 72

 Score = 38.7 bits (90), Expect = 0.28,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 20/46 (43%), Gaps = 8/46 (17%)

Query: 1  MKKGNVFMSCALEEAQNAALRNEIP---VGAVAVL-NNKIISRAGN 42
          +   + FM+ A   A+ +      P   VGA  V  +N+I+    N
Sbjct: 7  IDWDDYFMATAFLSAKRSKD----PNTQVGACIVNNDNRIVGTGYN 48


>gi|260654196|ref|ZP_05859686.1| cytidine deaminase [Jonquetella anthropi E3_33 E1]
 gi|260631181|gb|EEX49375.1| cytidine deaminase [Jonquetella anthropi E3_33 E1]
          Length = 241

 Score = 38.7 bits (90), Expect = 0.28,   Method: Composition-based stats.
 Identities = 22/64 (34%), Positives = 27/64 (42%), Gaps = 5/64 (7%)

Query: 25 PVGAVAVLNNKIISRAGNRNRELKDV--TAHAEILAIRMGCRILSQEILPEVDLYVTLEP 82
          PVGAVAV +        N      +   T HAEI A+    +    E   +  LYVT  P
Sbjct: 25 PVGAVAVGSTGRAYEGFNIEFPGCEPALTVHAEICAVTRAFQA--GERAVDS-LYVTETP 81

Query: 83 CTMC 86
          C  C
Sbjct: 82 CGHC 85


>gi|238489979|ref|XP_002376227.1| tRNA-specific adenosine-34 deaminase subunit Tad3, putative
           [Aspergillus flavus NRRL3357]
 gi|220698615|gb|EED54955.1| tRNA-specific adenosine-34 deaminase subunit Tad3, putative
           [Aspergillus flavus NRRL3357]
          Length = 347

 Score = 38.7 bits (90), Expect = 0.30,   Method: Composition-based stats.
 Identities = 11/38 (28%), Positives = 21/38 (55%)

Query: 63  CRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
            R     +  ++D+Y+T EPC  C+  + L+R R + +
Sbjct: 211 SRAQGGYLCTDLDVYLTHEPCLCCSMGLLLSRFRAIIF 248


>gi|322388052|ref|ZP_08061658.1| cytidine deaminase [Streptococcus infantis ATCC 700779]
 gi|321141073|gb|EFX36572.1| cytidine deaminase [Streptococcus infantis ATCC 700779]
          Length = 129

 Score = 38.4 bits (89), Expect = 0.34,   Method: Composition-based stats.
 Identities = 21/88 (23%), Positives = 32/88 (36%), Gaps = 6/88 (6%)

Query: 9  SCALEEAQNAALR-NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
            A+E ++ A +  +  P+GAV V  +  I    N       +T   E  AI        
Sbjct: 8  ELAIETSKKAYVPYSHFPIGAVLVAKDGSIYTGVNIENASYPLTNCGERTAIFKAISE-G 66

Query: 68 QEILPEVDLYVTLE----PCTMCAAAIS 91
          Q    E+ +Y   E    PC  C   + 
Sbjct: 67 QRDFSELIVYGQTEKPISPCGACRQVMV 94


>gi|237752793|ref|ZP_04583273.1| riboflavin biosynthesis protein RibD [Helicobacter winghamensis
           ATCC BAA-430]
 gi|229376282|gb|EEO26373.1| riboflavin biosynthesis protein RibD [Helicobacter winghamensis
           ATCC BAA-430]
          Length = 348

 Score = 38.4 bits (89), Expect = 0.34,   Method: Composition-based stats.
 Identities = 28/142 (19%), Positives = 45/142 (31%), Gaps = 39/142 (27%)

Query: 4   GNVFMSCALEEAQNAALRN--EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
              ++   L+ A    L+      V A+ +  N  I    +     K    HAE+LA++ 
Sbjct: 3   HAFYLDLCLQCAWKEQLKTLPNPAVAALVLDENGAIVSLESHKECGK---PHAEVLALQK 59

Query: 62  GCRILSQEI----------------------LPEVDLYVTLEPC--------TMCAAAIS 91
               LS +                         +  LYVTLEPC          CA  + 
Sbjct: 60  AYAALSGDNAILSLKESQAIHSYLLKNAIPIFKDTMLYVTLEPCSSNKKGKTPSCATLLK 119

Query: 92  LARIRRLYYGASN----PKGGG 109
             + + +     +     KGG 
Sbjct: 120 TLKPKCVIIATQDCDKSAKGGA 141


>gi|312220147|emb|CBY00089.1| hypothetical protein [Leptosphaeria maculans]
          Length = 866

 Score = 38.4 bits (89), Expect = 0.36,   Method: Composition-based stats.
 Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 3/49 (6%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKD 49
           MK  N +++  +E+A N+ LR     GA+ V   K+I +  N  R   D
Sbjct: 423 MKTDN-YLNLCIEQAANSPLRYRH--GAIVVRGGKVIGQGYNDYRSGFD 468


>gi|169609901|ref|XP_001798369.1| hypothetical protein SNOG_08042 [Phaeosphaeria nodorum SN15]
 gi|160701940|gb|EAT84318.2| hypothetical protein SNOG_08042 [Phaeosphaeria nodorum SN15]
          Length = 450

 Score = 38.4 bits (89), Expect = 0.38,   Method: Composition-based stats.
 Identities = 14/49 (28%), Positives = 24/49 (48%), Gaps = 3/49 (6%)

Query: 1  MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKD 49
          M+  N +++  L++A  + LR     GA+ V   K+I +  N  R   D
Sbjct: 1  MRTDN-YLNLCLDQAAKSPLRYRH--GAIIVRGGKVIGQGYNDYRTGFD 46


>gi|168182244|ref|ZP_02616908.1| cytidine/deoxycytidylate deaminase family protein [Clostridium
           botulinum Bf]
 gi|237793465|ref|YP_002861017.1| cytidine/deoxycytidylate deaminase family protein [Clostridium
           botulinum Ba4 str. 657]
 gi|182674630|gb|EDT86591.1| cytidine/deoxycytidylate deaminase family protein [Clostridium
           botulinum Bf]
 gi|229261677|gb|ACQ52710.1| cytidine/deoxycytidylate deaminase family protein [Clostridium
           botulinum Ba4 str. 657]
          Length = 162

 Score = 38.4 bits (89), Expect = 0.38,   Method: Composition-based stats.
 Identities = 22/118 (18%), Positives = 37/118 (31%), Gaps = 40/118 (33%)

Query: 26  VGAVAVLNNKIISRAG--------N-------RNRELKDVTA---------HAEILAIRM 61
             A+ V N++I++           N       +  ELK             HAE  AI  
Sbjct: 28  FAAIIVKNDEIMATGYTGAPRGRKNCCDLGYCKREELKVPRGTRYELCRSVHAEQNAIIS 87

Query: 62  GCRILSQEILPEVDLYVTLE------------PCTMCAAAISLARIRRLYYGASNPKG 107
             R      +    +Y+  +            PC++C   I  + I ++    S  K 
Sbjct: 88  ARRQ----DMIASTMYLVGKEYSTGKYVVNTAPCSLCKRFIINSGIYKVVIRDSKEKF 141


>gi|306825051|ref|ZP_07458393.1| cytidine deaminase [Streptococcus sp. oral taxon 071 str.
          73H25AP]
 gi|304432487|gb|EFM35461.1| cytidine deaminase [Streptococcus sp. oral taxon 071 str.
          73H25AP]
          Length = 129

 Score = 38.0 bits (88), Expect = 0.40,   Method: Composition-based stats.
 Identities = 21/83 (25%), Positives = 32/83 (38%), Gaps = 6/83 (7%)

Query: 9  SCALEEAQNAALR-NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
            A+E ++ A +  +  P+GAV V  +  I    N       +T   E  AI        
Sbjct: 8  ELAIETSKQAYVPYSHFPIGAVLVAKDGSIYTGVNIENASYSLTNCGERTAIFKAVSEGQ 67

Query: 68 QEILPEVDLYVTLE----PCTMC 86
          +E   E+ +Y   E    PC  C
Sbjct: 68 RE-FSELIVYGQTEKPISPCGAC 89


>gi|187933684|ref|YP_001884701.1| deoxycytidylate deaminase [Clostridium botulinum B str. Eklund 17B]
 gi|187721837|gb|ACD23058.1| dCMP deaminase [Clostridium botulinum B str. Eklund 17B]
          Length = 164

 Score = 38.0 bits (88), Expect = 0.40,   Method: Composition-based stats.
 Identities = 22/110 (20%), Positives = 31/110 (28%), Gaps = 40/110 (36%)

Query: 27  GAVAVLNNKIISRAG-------------NRNRELK----DVTA-------HAEILAIRMG 62
           G++ V N++IIS                N     K      T        H+E  AI   
Sbjct: 29  GSIIVKNDEIISTGYTGAPRGRKNCIDINSCIREKLQVPRGTHYELCRSVHSEANAIISA 88

Query: 63  CRILSQEILPEVDLYVTLE------------PCTMCAAAISLARIRRLYY 100
            R      +    LY+                C+MC   I  A I  +  
Sbjct: 89  SRR----DMIGATLYLVGRDVKTREYVENANSCSMCKRLIINAGISYVVI 134


>gi|326480504|gb|EGE04514.1| tRNA-specific adenosine-34 deaminase subunit Tad3 [Trichophyton
           equinum CBS 127.97]
          Length = 481

 Score = 38.0 bits (88), Expect = 0.41,   Method: Composition-based stats.
 Identities = 15/61 (24%), Positives = 23/61 (37%)

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
              +   +DLY+T EPC  C+  + L+R R +    S  +     N          H   
Sbjct: 392 GGYLCTGLDLYITHEPCICCSMGMLLSRFRSITVLNSGMRRSAESNALDAVNGYGLHWRE 451

Query: 127 E 127
           E
Sbjct: 452 E 452


>gi|326472290|gb|EGD96299.1| hypothetical protein TESG_03752 [Trichophyton tonsurans CBS 112818]
          Length = 482

 Score = 38.0 bits (88), Expect = 0.41,   Method: Composition-based stats.
 Identities = 15/61 (24%), Positives = 23/61 (37%)

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
              +   +DLY+T EPC  C+  + L+R R +    S  +     N          H   
Sbjct: 393 GGYLCTGLDLYITHEPCICCSMGMLLSRFRSITVLNSGMRRSAESNALDAVNGYGLHWRE 452

Query: 127 E 127
           E
Sbjct: 453 E 453


>gi|302656326|ref|XP_003019917.1| tRNA-specific adenosine-34 deaminase subunit Tad3, putative
           [Trichophyton verrucosum HKI 0517]
 gi|291183693|gb|EFE39293.1| tRNA-specific adenosine-34 deaminase subunit Tad3, putative
           [Trichophyton verrucosum HKI 0517]
          Length = 443

 Score = 38.0 bits (88), Expect = 0.41,   Method: Composition-based stats.
 Identities = 15/61 (24%), Positives = 23/61 (37%)

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
              +   +DLY+T EPC  C+  + L+R R +    S  +     N          H   
Sbjct: 356 GGYLCTGLDLYITHEPCICCSMGMLLSRFRSITVLNSGMRRSAESNALDAVNGYGLHWRE 415

Query: 127 E 127
           E
Sbjct: 416 E 416


>gi|307709020|ref|ZP_07645480.1| cytidine deaminase [Streptococcus mitis SK564]
 gi|307620356|gb|EFN99472.1| cytidine deaminase [Streptococcus mitis SK564]
          Length = 129

 Score = 37.6 bits (87), Expect = 0.53,   Method: Composition-based stats.
 Identities = 20/88 (22%), Positives = 33/88 (37%), Gaps = 6/88 (6%)

Query: 9  SCALEEAQNAALR-NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
            A+E +++A +  +  P+GAV V  +  +    N       +T   E  AI        
Sbjct: 8  ELAIETSKHAYVPYSHFPIGAVLVAKDGSVYTGVNIENASYSLTNCGERTAIFKAVSE-G 66

Query: 68 QEILPEVDLYVTLE----PCTMCAAAIS 91
          Q    E+ +Y   E    PC  C   + 
Sbjct: 67 QRDFSELIVYGQTEKPISPCGACRQVMV 94


>gi|268573922|ref|XP_002641938.1| Hypothetical protein CBG16641 [Caenorhabditis briggsae]
          Length = 124

 Score = 37.6 bits (87), Expect = 0.53,   Method: Composition-based stats.
 Identities = 22/86 (25%), Positives = 36/86 (41%), Gaps = 11/86 (12%)

Query: 25  PVGAVAVLNN--KIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPE--VDLYVTL 80
           P G   V  +  +IIS   +     K+ +      AI    R L ++ +      +Y+T 
Sbjct: 11  PNGCYIVDEDNYQIIS-GYSGEVASKNDSCQC---AILSALRKLEKKAISGDNFIMYITT 66

Query: 81  EP-CTMCAAAISLARIRRLYYGASNP 105
            P CT C   I   +I +++Y   NP
Sbjct: 67  FPSCTHCLERILHMKISKIWY--WNP 90


>gi|67900884|ref|XP_680698.1| hypothetical protein AN7429.2 [Aspergillus nidulans FGSC A4]
 gi|40742819|gb|EAA62009.1| hypothetical protein AN7429.2 [Aspergillus nidulans FGSC A4]
 gi|259483732|tpe|CBF79364.1| TPA: deoxycytidylate deaminase, putative (AFU_orthologue;
           AFUA_2G06240) [Aspergillus nidulans FGSC A4]
          Length = 314

 Score = 37.6 bits (87), Expect = 0.54,   Method: Composition-based stats.
 Identities = 13/43 (30%), Positives = 16/43 (37%), Gaps = 5/43 (11%)

Query: 4   GNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGNRN 44
              FM  A   AQ +    R    VG V V   ++IS   N  
Sbjct: 235 DQYFMELASLAAQRSNCMKRR---VGCVLVRERRVISTGYNGT 274


>gi|296537269|ref|ZP_06899158.1| riboflavin biosynthesis protein RibD [Roseomonas cervicalis ATCC
           49957]
 gi|296262404|gb|EFH09140.1| riboflavin biosynthesis protein RibD [Roseomonas cervicalis ATCC
           49957]
          Length = 225

 Score = 37.6 bits (87), Expect = 0.59,   Method: Composition-based stats.
 Identities = 24/102 (23%), Positives = 34/102 (33%), Gaps = 15/102 (14%)

Query: 53  HAEILAIRMGCRILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGASNPK 106
           HAE  A+       +         YVTLEPC        C  A+  A + R+     +P 
Sbjct: 10  HAETEAL-----KRAGAAARGATAYVTLEPCCHWGRTPPCTDALIAAGVARVVVAMRDPD 64

Query: 107 GGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKER 148
                 G +    A       +  G+ E  +R I   F K  
Sbjct: 65  PRVDGGGIEQLRAAG----IAVSTGLLEDEARAINAGFTKRL 102


>gi|75761017|ref|ZP_00741020.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase /
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Bacillus thuringiensis serovar israelensis ATCC 35646]
 gi|74491503|gb|EAO54716.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase  /
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Bacillus thuringiensis serovar israelensis ATCC 35646]
          Length = 284

 Score = 37.6 bits (87), Expect = 0.61,   Method: Composition-based stats.
 Identities = 12/59 (20%), Positives = 22/59 (37%), Gaps = 7/59 (11%)

Query: 94  RIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFF---KERR 149
           R +R+     +       NG +    A      E+  G+ E  +  + + FF   K +R
Sbjct: 6   RSKRVVIATLDCNPLVSGNGKRRLEEA----RIEVTTGVLEAEAVLLNRYFFHYMKTKR 60


>gi|310815143|ref|YP_003963107.1| riboflavin biosynthesis protein RibD [Ketogulonicigenium vulgare
           Y25]
 gi|308753878|gb|ADO41807.1| riboflavin biosynthesis protein RibD [Ketogulonicigenium vulgare
           Y25]
          Length = 324

 Score = 37.6 bits (87), Expect = 0.63,   Method: Composition-based stats.
 Identities = 17/54 (31%), Positives = 20/54 (37%), Gaps = 6/54 (11%)

Query: 75  DLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATC 122
              VTLEPC        C  AI     RR++ GA +P       GT     A  
Sbjct: 78  TFVVTLEPCNHHGRTAPCTDAILQTPARRVFIGARDPNPRVAGGGTARLRAAGL 131


>gi|258569861|ref|XP_002543734.1| predicted protein [Uncinocarpus reesii 1704]
 gi|237904004|gb|EEP78405.1| predicted protein [Uncinocarpus reesii 1704]
          Length = 436

 Score = 37.6 bits (87), Expect = 0.63,   Method: Composition-based stats.
 Identities = 15/68 (22%), Positives = 25/68 (36%), Gaps = 4/68 (5%)

Query: 62  GCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYG--ASNPKGGG--IENGTQFY 117
                   +   +D+Y+T EPC  CA  + L+R R +  G      + G    E G   +
Sbjct: 338 ASPSGGGYLCTSLDVYITHEPCLCCAMGMLLSRFRTIIVGKRVRGSEFGSLDAEKGYGLH 397

Query: 118 TLATCHHS 125
                +  
Sbjct: 398 WRRELNWR 405


>gi|114777920|ref|ZP_01452834.1| ATP-dependent helicase HrpB [Mariprofundus ferrooxydans PV-1]
 gi|114551707|gb|EAU54259.1| ATP-dependent helicase HrpB [Mariprofundus ferrooxydans PV-1]
          Length = 861

 Score = 37.6 bits (87), Expect = 0.63,   Method: Composition-based stats.
 Identities = 29/151 (19%), Positives = 53/151 (35%), Gaps = 40/151 (26%)

Query: 6   VFMSC----ALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
            +M      A+E+A+    +    +GA+   +             L  +TAH      R 
Sbjct: 389 QWMDLPPHGAIEQAKTLLQQ----LGAI---DG------------LGTITAHG-----RD 424

Query: 62  GCRILSQEILPEVDLYVT--LEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
             R+ +   L  + L      +    C  A  L+   +  + A+  K   I +       
Sbjct: 425 MLRLGTHPRLAHMMLAAVKLNQAYHACLIASLLS--EKDIFLANADKSADIHDRLNVLLH 482

Query: 120 ATCHHSPEIYPGISEQRSRQIIQ---DFFKE 147
              +H      GI  Q+ ++I+Q   DFF+ 
Sbjct: 483 GKSNHH-----GIDHQQCKRIMQSADDFFRR 508


>gi|284051814|ref|ZP_06382024.1| CMP/dCMP deaminase zinc-binding protein [Arthrospira platensis
          str. Paraca]
          Length = 127

 Score = 37.6 bits (87), Expect = 0.64,   Method: Composition-based stats.
 Identities = 11/39 (28%), Positives = 17/39 (43%), Gaps = 1/39 (2%)

Query: 4  GNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGN 42
             F+  A   A  +      PVGAV V + +I++   N
Sbjct: 29 DEYFLMFAKLAATRSTCLA-FPVGAVIVKDRQILATGYN 66


>gi|296810292|ref|XP_002845484.1| conserved hypothetical protein [Arthroderma otae CBS 113480]
 gi|238842872|gb|EEQ32534.1| conserved hypothetical protein [Arthroderma otae CBS 113480]
          Length = 440

 Score = 37.6 bits (87), Expect = 0.66,   Method: Composition-based stats.
 Identities = 15/61 (24%), Positives = 23/61 (37%)

Query: 67  SQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSP 126
              +   +DLY+T EPC  C+  + L+R R +    S  +     N          H   
Sbjct: 354 GGYLCTGLDLYITHEPCICCSMGMLLSRFRSITVLHSGMRRSAGSNALDAVHGYGLHWRE 413

Query: 127 E 127
           E
Sbjct: 414 E 414


>gi|167839755|ref|ZP_02466439.1| riboflavin biosynthesis protein RibD [Burkholderia thailandensis
          MSMB43]
          Length = 54

 Score = 37.6 bits (87), Expect = 0.66,   Method: Composition-based stats.
 Identities = 8/43 (18%), Positives = 13/43 (30%), Gaps = 2/43 (4%)

Query: 4  GNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRN 44
              M+ AL  A+           VG V     + +    +R 
Sbjct: 8  DRAHMAHALRLAEQGLYTTHPNPRVGCVIARGGQTLGTGWHRR 50


>gi|296236917|ref|XP_002763536.1| PREDICTED: DNA dC->dU-editing enzyme APOBEC-3F-like, partial
           [Callithrix jacchus]
          Length = 234

 Score = 37.2 bits (86), Expect = 0.68,   Method: Composition-based stats.
 Identities = 30/129 (23%), Positives = 41/129 (31%), Gaps = 39/129 (30%)

Query: 8   MSCALEEAQNAALRNEIPVGAVAVLNNKI-------------ISRAGNRNRELK------ 48
           M      A+ AA    +    V V  +++             + R     R         
Sbjct: 1   MRL---LAKAAARVGGV----VLVSRSEVDVPASRSDGVRKWLRRPSELRRSSGGFPVGP 53

Query: 49  DVTAHAEILAIRMGCRILSQEILP-EVDLYVTLEPCTMCAA--AISLAR---------IR 96
           D + HAE+  +   C  +       EV  Y +  PC  CA   A  LAR           
Sbjct: 54  DPSCHAEMCFLSWFCHNMLSPNKDYEVTWYASWSPCPECAGQVAEFLARHRNVRLTMFTA 113

Query: 97  RLYYGASNP 105
           RLYY   NP
Sbjct: 114 RLYY-FWNP 121


>gi|289619394|emb|CBI53677.1| unnamed protein product [Sordaria macrospora]
          Length = 251

 Score = 37.2 bits (86), Expect = 0.70,   Method: Composition-based stats.
 Identities = 15/72 (20%), Positives = 25/72 (34%), Gaps = 16/72 (22%)

Query: 45  RELKDVTAHAEILAIRMGCRILSQ--------------EILP--EVDLYVTLEPCTMCAA 88
            E +    H EI  I+    +                   +P  +   + T EPC++C +
Sbjct: 69  NERESPLLHGEINCIQQYFSLPPASTPEEAEEKEEGQVYRIPTKDTIFFATHEPCSLCLS 128

Query: 89  AISLARIRRLYY 100
            I+ A     YY
Sbjct: 129 GITWAGFNEFYY 140


>gi|150015299|ref|YP_001307553.1| CMP/dCMP deaminase, zinc-binding [Clostridium beijerinckii NCIMB
           8052]
 gi|149901764|gb|ABR32597.1| CMP/dCMP deaminase, zinc-binding [Clostridium beijerinckii NCIMB
           8052]
          Length = 164

 Score = 37.2 bits (86), Expect = 0.71,   Method: Composition-based stats.
 Identities = 20/110 (18%), Positives = 30/110 (27%), Gaps = 40/110 (36%)

Query: 27  GAVAVLNNKIISRAGN-------RNRELKDVTA-----------------HAEILAIRMG 62
           G++ V N++IIS              +L                      H+E  AI   
Sbjct: 29  GSIIVKNDEIISTGYTGAPRGRKNCMDLNSCIREKLKVPRGTHYELCRSVHSEANAIISA 88

Query: 63  CRILSQEILPEVDLYVTLE------------PCTMCAAAISLARIRRLYY 100
            R      +    LY+                C+MC   I  A I  +  
Sbjct: 89  SRR----DMIGATLYLVGRDAKTREYVRDANSCSMCKRLIINAGISNVII 134


>gi|299535810|ref|ZP_07049131.1| cytidine deaminase [Lysinibacillus fusiformis ZC1]
 gi|298729010|gb|EFI69564.1| cytidine deaminase [Lysinibacillus fusiformis ZC1]
          Length = 137

 Score = 37.2 bits (86), Expect = 0.73,   Method: Composition-based stats.
 Identities = 21/91 (23%), Positives = 31/91 (34%), Gaps = 8/91 (8%)

Query: 8  MSCALEEAQNAALRNEIP-----VGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRM 61
          M   LEE++ A  +  +P     VGA  +  + ++I    N       +T  AE  A   
Sbjct: 5  MHALLEESKKAREKAYVPYSKFKVGAALLTKDGQVI-HGCNIENAGYSMTNCAERTAFFK 63

Query: 62 GCRILSQEILPEVDLYVTLEPCTMCAAAISL 92
                 E      +  T  PC  C  A   
Sbjct: 64 AVSEGIYEFEAIAIVADTDGPCAPC-GACRQ 93


>gi|313576877|gb|ADR67050.1| CMP/dCMP deaminase zinc-binding [Klebsiella pneumoniae subsp.
           pneumoniae]
          Length = 584

 Score = 37.2 bits (86), Expect = 0.75,   Method: Composition-based stats.
 Identities = 16/81 (19%), Positives = 27/81 (33%), Gaps = 7/81 (8%)

Query: 41  GNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYY 100
           GN+         HAE  A     +     +     LY T  PC +CA      ++  + +
Sbjct: 477 GNQVHTRA---LHAEENAFLQLAKYGGVGV-QGGKLYTTASPCELCAKKAYQLQVAEIIF 532

Query: 101 GASNPKGG-GIENGTQFYTLA 120
              +P  G   E+     +  
Sbjct: 533 --IDPYPGIAQEHIINIGSNP 551


>gi|317010121|gb|ADU80701.1| riboflavin biosynthesis protein (ribG) [Helicobacter pylori India7]
          Length = 344

 Score = 37.2 bits (86), Expect = 0.76,   Method: Composition-based stats.
 Identities = 25/122 (20%), Positives = 41/122 (33%), Gaps = 38/122 (31%)

Query: 23  EIP-VGA-VAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL-------------- 66
           E P V   V   +++I+S         K  T HAE+LA +   +IL              
Sbjct: 24  ENPSVACMVLDKHHEILS----LETHKKAKTPHAEVLAAQSALKILRPSLKNDLEKLEDP 79

Query: 67  ----------SQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGAS--NPKGG 108
                           +    +TLEPC        C+  + + + +R+         K G
Sbjct: 80  KTLSDFLKTHHDNAFTDCVFLITLEPCNSYGKTPACSELLEILKPKRVVIATEENEAKKG 139

Query: 109 GI 110
           G+
Sbjct: 140 GL 141


>gi|295837177|ref|ZP_06824110.1| cytosine deaminase [Streptomyces sp. SPB74]
 gi|197698525|gb|EDY45458.1| cytosine deaminase [Streptomyces sp. SPB74]
          Length = 75

 Score = 37.2 bits (86), Expect = 0.80,   Method: Composition-based stats.
 Identities = 14/69 (20%), Positives = 24/69 (34%), Gaps = 9/69 (13%)

Query: 76  LYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQ 135
           +  TL PC  C+  I+     R+  G S    GG      +          EI   ++  
Sbjct: 1   MVTTLSPCWYCSGLINQFGSTRVVIGESTTFKGG----EDWLEEQG----VEIIR-LTNP 51

Query: 136 RSRQIIQDF 144
               ++ +F
Sbjct: 52  ECVGLMTEF 60


>gi|158341001|ref|YP_001522168.1| hypothetical protein AM1_E0085 [Acaryochloris marina MBIC11017]
 gi|158311242|gb|ABW32854.1| hypothetical protein AM1_E0085 [Acaryochloris marina MBIC11017]
          Length = 41

 Score = 37.2 bits (86), Expect = 0.82,   Method: Composition-based stats.
 Identities = 11/34 (32%), Positives = 16/34 (47%), Gaps = 5/34 (14%)

Query: 1  MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNN 34
          M  G+ FM  A+EE++          GAV V + 
Sbjct: 1  MNDGD-FMRMAIEESKKGDSL----YGAVLVKDG 29


>gi|317014921|gb|ADU82357.1| riboflavin biosynthesis protein [Helicobacter pylori Gambia94/24]
          Length = 344

 Score = 37.2 bits (86), Expect = 0.83,   Method: Composition-based stats.
 Identities = 32/156 (20%), Positives = 50/156 (32%), Gaps = 45/156 (28%)

Query: 23  EIP-VGA-VAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL-------------- 66
           E P V   V   N++I+S         K  T HAE+LA +   +IL              
Sbjct: 24  ENPSVACMVLDKNHEILS----LETHKKAKTPHAEVLAAKSALKILRPHLKNDLEKLEDP 79

Query: 67  ----------SQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGAS--NPKGG 108
                           +    +TLEPC        C+  + + + +R    A     K G
Sbjct: 80  KILSDFLKTRHDNAFKDCVFLITLEPCNSYGKTPACSELLEILKPKRAVIAAEENEAKKG 139

Query: 109 GIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
           G         L   H    I     E +++ ++  F
Sbjct: 140 G------LARLQKAHIETIICRN-LENKAKNLLLPF 168


>gi|153830297|ref|ZP_01982964.1| deoxycytidylate deaminase [Vibrio cholerae 623-39]
 gi|148874195|gb|EDL72330.1| deoxycytidylate deaminase [Vibrio cholerae 623-39]
          Length = 423

 Score = 37.2 bits (86), Expect = 0.83,   Method: Composition-based stats.
 Identities = 13/64 (20%), Positives = 25/64 (39%), Gaps = 3/64 (4%)

Query: 45  RELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASN 104
            ++   + HAE  A     +      +    L+ T  PC +CA       + +++Y   +
Sbjct: 352 NQVHTRSLHAEENAFLQISK-DGGSGVNGGFLFTTASPCELCAKKAYQLGMTKIFY--ID 408

Query: 105 PKGG 108
           P  G
Sbjct: 409 PYPG 412


>gi|83767090|dbj|BAE57230.1| unnamed protein product [Aspergillus oryzae]
          Length = 111

 Score = 37.2 bits (86), Expect = 0.85,   Method: Composition-based stats.
 Identities = 22/100 (22%), Positives = 27/100 (27%), Gaps = 31/100 (31%)

Query: 4   GNVFMSCALEEAQNA--ALRNEIPVGAVAVLNNKIISRAGN-------RNRELKDV---- 50
              FM  A   AQ +    R    VG V V   ++IS   N          E        
Sbjct: 16  DQYFMQLASLAAQRSNCMKRR---VGCVLVRECRVISTGYNGTPRHLRNCNEAGCPRCNR 72

Query: 51  ------------TAHAEILAIRMGCRILSQEILPEVDLYV 78
                         HAE  A+    R   +E      LY 
Sbjct: 73  GEGGGVGLSTCLCLHAEENALLEAGRERIRE---GTILYC 109


>gi|327409667|ref|YP_004347087.1| putative nucleoside deaminase [Lausannevirus]
 gi|326784841|gb|AEA06975.1| putative nucleoside deaminase [Lausannevirus]
          Length = 81

 Score = 36.8 bits (85), Expect = 0.95,   Method: Composition-based stats.
 Identities = 17/59 (28%), Positives = 30/59 (50%), Gaps = 6/59 (10%)

Query: 9  SCALEEAQNAALRNEIP--VGAVAVLNNKIISRAGNRNRE----LKDVTAHAEILAIRM 61
              E A+  AL++E+   +G VAV+  K++S   NR+ +     K    HAE+  ++ 
Sbjct: 8  QRFFEMARQQALKSEMSQKIGCVAVIGGKVVSFGYNRDMDGLVLGKSCRMHAEMCTLKR 66


>gi|103488468|ref|YP_618029.1| riboflavin biosynthesis protein RibD [Sphingopyxis alaskensis
          RB2256]
 gi|98978545|gb|ABF54696.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase /
          diaminohydroxyphosphoribosylaminopyrimidine deaminase
          [Sphingopyxis alaskensis RB2256]
          Length = 325

 Score = 36.8 bits (85), Expect = 1.0,   Method: Composition-based stats.
 Identities = 14/63 (22%), Positives = 23/63 (36%), Gaps = 9/63 (14%)

Query: 26 VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85
          VG + V  +++++R     +       H E           +         YVTLEPC  
Sbjct: 32 VGCLIVKADQVVARGW--TQAGGRP--HGE-----AVALAAAGVAARGATAYVTLEPCVH 82

Query: 86 CAA 88
           +A
Sbjct: 83 ASA 85


>gi|310830842|ref|YP_003965943.1| Ribonuclease HI [Paenibacillus polymyxa SC2]
 gi|309250309|gb|ADO59875.1| Ribonuclease HI [Paenibacillus polymyxa SC2]
          Length = 146

 Score = 36.8 bits (85), Expect = 1.1,   Method: Composition-based stats.
 Identities = 15/55 (27%), Positives = 25/55 (45%), Gaps = 2/55 (3%)

Query: 26 VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80
          +GAV   + + +  A +      D + +AE LA+   CR L    + +VD Y   
Sbjct: 35 IGAVI-KDGEQVVGAISERIGFSD-SNYAEFLAMYTACRYLIDHNISKVDFYADC 87


>gi|222479370|ref|YP_002565607.1| cytidine deaminase [Halorubrum lacusprofundi ATCC 49239]
 gi|222452272|gb|ACM56537.1| cytidine deaminase [Halorubrum lacusprofundi ATCC 49239]
          Length = 133

 Score = 36.8 bits (85), Expect = 1.1,   Method: Composition-based stats.
 Identities = 18/89 (20%), Positives = 31/89 (34%), Gaps = 13/89 (14%)

Query: 8  MSCALEEAQNAALRNEIP-----VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
          M   +E A++A     +P     VGA     +  +    N        + HAE +A+   
Sbjct: 1  MDL-IEAARDALDDAHVPYSEYRVGAALRTADGTVYTGCNIENANYSNSLHAEEVALAEA 59

Query: 63 CRILSQEILPEVDLYVTLE-----PCTMC 86
           +   +E   +     +       PC MC
Sbjct: 60 VKNGHREF--DRIAVTSGVRDGVTPCGMC 86


>gi|307704616|ref|ZP_07641518.1| cytidine deaminase [Streptococcus mitis SK597]
 gi|307621818|gb|EFO00853.1| cytidine deaminase [Streptococcus mitis SK597]
          Length = 129

 Score = 36.4 bits (84), Expect = 1.2,   Method: Composition-based stats.
 Identities = 20/88 (22%), Positives = 33/88 (37%), Gaps = 6/88 (6%)

Query: 9  SCALEEAQNAALR-NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
            A+E ++ A +  +  P+GAV V  +  +    N       +T   E  AI        
Sbjct: 8  ELAIETSKKAYVPYSHFPIGAVLVAKDGSVYTGVNIENASYPLTNCGERTAIFKAVSEGQ 67

Query: 68 QEILPEVDLYVTLE----PCTMCAAAIS 91
          +E   E+ +Y   E    PC  C   + 
Sbjct: 68 RE-FSELIVYGQTEKPISPCGACRQVMV 94


>gi|293365624|ref|ZP_06612333.1| cytidine deaminase [Streptococcus oralis ATCC 35037]
 gi|315613339|ref|ZP_07888248.1| cytidine deaminase [Streptococcus sanguinis ATCC 49296]
 gi|322375413|ref|ZP_08049926.1| cytidine deaminase [Streptococcus sp. C300]
 gi|291315992|gb|EFE56436.1| cytidine deaminase [Streptococcus oralis ATCC 35037]
 gi|315314574|gb|EFU62617.1| cytidine deaminase [Streptococcus sanguinis ATCC 49296]
 gi|321279676|gb|EFX56716.1| cytidine deaminase [Streptococcus sp. C300]
          Length = 129

 Score = 36.4 bits (84), Expect = 1.2,   Method: Composition-based stats.
 Identities = 21/88 (23%), Positives = 33/88 (37%), Gaps = 6/88 (6%)

Query: 9  SCALEEAQNAALR-NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
            A+E ++ A +  +  P+GAV V  +  I    N       +T   E  AI        
Sbjct: 8  ELAIETSKQAYVPYSHFPIGAVLVAKDGSIYTGVNIENASYPLTNCGERTAIFKAVSEGQ 67

Query: 68 QEILPEVDLYVTLE----PCTMCAAAIS 91
          +E   E+ +Y   E    PC  C   + 
Sbjct: 68 RE-FSELIVYGQTEKPISPCGACRQVMV 94


>gi|288555744|ref|YP_003427679.1| cytidine deaminase [Bacillus pseudofirmus OF4]
 gi|288546904|gb|ADC50787.1| cytidine deaminase [Bacillus pseudofirmus OF4]
          Length = 132

 Score = 36.4 bits (84), Expect = 1.2,   Method: Composition-based stats.
 Identities = 16/89 (17%), Positives = 31/89 (34%), Gaps = 6/89 (6%)

Query: 9  SCALEEAQNAALRNEIP-----VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGC 63
             +E A+ A     +P     VGA  ++ +  + +  N       +T  AE  A+    
Sbjct: 4  QQLIELAKEARENAYVPYSKFQVGAALLMEDGTVFKGANIENASYGLTNCAERTALYKAY 63

Query: 64 RILSQEILPEVDLYVTLEPCTMCAAAISL 92
             ++++     +  T  P   C  A   
Sbjct: 64 SEGNRKVAAIAVVADTDRPVPPC-GACRQ 91


>gi|254427046|ref|ZP_05040753.1| Cytidine and deoxycytidylate deaminase zinc-binding region domain
           protein [Alcanivorax sp. DG881]
 gi|196193215|gb|EDX88174.1| Cytidine and deoxycytidylate deaminase zinc-binding region domain
           protein [Alcanivorax sp. DG881]
          Length = 588

 Score = 36.4 bits (84), Expect = 1.2,   Method: Composition-based stats.
 Identities = 15/85 (17%), Positives = 31/85 (36%), Gaps = 7/85 (8%)

Query: 45  RELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASN 104
            ++   + HAE  A     +     +     L+ T  PC +C+       I  + +   +
Sbjct: 480 NQVHTRSLHAEENAFLQITKYGGASV-RGGKLFSTASPCELCSKKALQLGIEEIVF--ID 536

Query: 105 PKGGGIENGTQFYTLATCHHSPEIY 129
           P  G     ++ + +A   H P + 
Sbjct: 537 PYPG----ISRDHVMANGEHRPTLT 557


>gi|306829677|ref|ZP_07462867.1| cytidine deaminase [Streptococcus mitis ATCC 6249]
 gi|304428763|gb|EFM31853.1| cytidine deaminase [Streptococcus mitis ATCC 6249]
          Length = 129

 Score = 36.4 bits (84), Expect = 1.3,   Method: Composition-based stats.
 Identities = 22/88 (25%), Positives = 34/88 (38%), Gaps = 6/88 (6%)

Query: 9  SCALEEAQNAALR-NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
            A+E ++NA +  +  P+GAV V  +  I    N       +T   E  AI        
Sbjct: 8  ELAIETSKNAYVPYSHFPIGAVLVAKDGSIYTGVNIENASYPLTNCGERTAIFKAVSEGQ 67

Query: 68 QEILPEVDLYVTLE----PCTMCAAAIS 91
          +E   E+ +Y   E    PC  C   + 
Sbjct: 68 RE-FSELIVYGQTEKPISPCGACRQVMV 94


>gi|317153549|ref|YP_004121597.1| cytidine deaminase [Desulfovibrio aespoeensis Aspo-2]
 gi|316943800|gb|ADU62851.1| cytidine deaminase [Desulfovibrio aespoeensis Aspo-2]
          Length = 142

 Score = 36.4 bits (84), Expect = 1.4,   Method: Composition-based stats.
 Identities = 19/86 (22%), Positives = 30/86 (34%), Gaps = 6/86 (6%)

Query: 13 EEAQNAALRN-----EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG-CRIL 66
          +EA+ A+        E PVGA  +  +  +    N       +T  AE  A+        
Sbjct: 14 DEAREASRNAYAPYSEFPVGAALLAEDGEVYVGCNVENASFGLTVCAERCAVHAAVSDGR 73

Query: 67 SQEILPEVDLYVTLEPCTMCAAAISL 92
           +  L  + +YV  E C     A   
Sbjct: 74 GRGDLSALLIYVPGETCHSPCGACRQ 99


>gi|213579885|ref|ZP_03361711.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
           deaminase/5-amino-6-(5-phosphoribosylamino)uracil
           reductase [Salmonella enterica subsp. enterica serovar
           Typhi str. E98-0664]
          Length = 301

 Score = 36.4 bits (84), Expect = 1.4,   Method: Composition-based stats.
 Identities = 18/81 (22%), Positives = 27/81 (33%), Gaps = 10/81 (12%)

Query: 75  DLYVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEI 128
             YVTLEPC        C  A+  A + R+     +P       G      A       +
Sbjct: 1   TAYVTLEPCSHHGRTPPCCDALIAAGVARVVAAMQDPNPQVAGRGLYRLQQAG----IAV 56

Query: 129 YPGISEQRSRQIIQDFFKERR 149
             G+    +  + + F K  R
Sbjct: 57  SHGLMMSEAEALNKGFLKRMR 77


>gi|322376396|ref|ZP_08050889.1| cytidine deaminase [Streptococcus sp. M334]
 gi|321282203|gb|EFX59210.1| cytidine deaminase [Streptococcus sp. M334]
          Length = 129

 Score = 36.4 bits (84), Expect = 1.5,   Method: Composition-based stats.
 Identities = 22/83 (26%), Positives = 32/83 (38%), Gaps = 6/83 (7%)

Query: 9  SCALEEAQNAALR-NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
            A+E ++ A +  +  PVGAV V  +  I    N       +T   E  AI        
Sbjct: 8  ELAIETSKQAYVPYSHFPVGAVLVAKDGSIYTGVNIENASYPLTNCGERTAIFKAVSEGQ 67

Query: 68 QEILPEVDLYVTLE----PCTMC 86
          +E   E+ +Y   E    PC  C
Sbjct: 68 RE-FSELIVYGRTEKPISPCGAC 89


>gi|257458848|ref|ZP_05623971.1| riboflavin biosynthesis protein RibD [Campylobacter gracilis
           RM3268]
 gi|257443836|gb|EEV18956.1| riboflavin biosynthesis protein RibD [Campylobacter gracilis
           RM3268]
          Length = 147

 Score = 36.4 bits (84), Expect = 1.5,   Method: Composition-based stats.
 Identities = 11/78 (14%), Positives = 23/78 (29%), Gaps = 11/78 (14%)

Query: 77  YVTLEPC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYP 130
           Y   EPC        CA  ++   + R+  G  +                      E+  
Sbjct: 4   YAAFEPCAHRGRTPSCAELLAQLGLSRVVIGTRDTNAQAAGGAEILLCG-----GIEVKF 58

Query: 131 GISEQRSRQIIQDFFKER 148
            +    + ++ + F+  R
Sbjct: 59  DVCHAAAEELAEPFYLAR 76


>gi|126652810|ref|ZP_01724955.1| Cdd [Bacillus sp. B14905]
 gi|126590346|gb|EAZ84466.1| Cdd [Bacillus sp. B14905]
          Length = 137

 Score = 36.0 bits (83), Expect = 1.7,   Method: Composition-based stats.
 Identities = 20/92 (21%), Positives = 30/92 (32%), Gaps = 10/92 (10%)

Query: 8  MSCALEEAQNAALRNEIP-----VG-AVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
          M   LEE++ A  +  +P     VG A+     ++I    N       +T  AE  A   
Sbjct: 5  MHALLEESKKAREKAYVPYSKFKVGAALLTKAGEVI-HGCNIENAGYSMTNCAERTAFFK 63

Query: 62 GCRILSQEILPEVDLYVTLE-PCTMCAAAISL 92
                      + +    E PC  C  A   
Sbjct: 64 AV-SEGTYEFEAIAIVADTEGPCAPC-GACRQ 93


>gi|219882858|ref|YP_002478022.1| CMP/dCMP deaminase zinc-binding [Arthrobacter chlorophenolicus A6]
 gi|219861864|gb|ACL42205.1| CMP/dCMP deaminase zinc-binding [Arthrobacter chlorophenolicus A6]
          Length = 125

 Score = 36.0 bits (83), Expect = 1.7,   Method: Composition-based stats.
 Identities = 26/123 (21%), Positives = 38/123 (30%), Gaps = 40/123 (32%)

Query: 8   MSCALEEAQNA---ALRNEIPVGAVAVLNN-KIISRAGN----------------RNREL 47
           MS A   A  A     +    VGAV +  + +I++   N                R    
Sbjct: 1   MSIATAVAARADCSRAQ----VGAVIMTADMRIVATGYNGAPSGMAGCLTSGACPRASVG 56

Query: 48  KD------------VTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARI 95
           KD            ++ HAE  AI           +    L  T +PC  C   I    +
Sbjct: 57  KDYGSSYDTGPGACISIHAEANAIIRASWA----DMEGSTLSTTKKPCDGCWKLILATPL 112

Query: 96  RRL 98
            R+
Sbjct: 113 ARV 115


>gi|162447803|ref|YP_001620935.1| cytidine deaminase [Acholeplasma laidlawii PG-8A]
 gi|161985910|gb|ABX81559.1| cytidine deaminase [Acholeplasma laidlawii PG-8A]
          Length = 130

 Score = 36.0 bits (83), Expect = 1.8,   Method: Composition-based stats.
 Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 5/53 (9%)

Query: 12 LEEAQNAALRNEIP-----VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAI 59
          LE A+ A L+  +P     VGA  VLN+  I    N       +T+ AE  A+
Sbjct: 3  LEAAKQARLKAYVPYSRFKVGAAIVLNDGTIIHGANIENSSFGLTSCAERNAL 55


>gi|331266186|ref|YP_004325816.1| cytidine deaminase [Streptococcus oralis Uo5]
 gi|326682858|emb|CBZ00475.1| cytidine deaminase [Streptococcus oralis Uo5]
          Length = 129

 Score = 36.0 bits (83), Expect = 1.8,   Method: Composition-based stats.
 Identities = 21/88 (23%), Positives = 33/88 (37%), Gaps = 6/88 (6%)

Query: 9  SCALEEAQNAALR-NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
            A+E ++NA +  +  P+GAV V  +  I    N       +T   E  AI        
Sbjct: 8  ELAIETSKNAYVPYSHFPIGAVLVAKDGSIYTGVNIENASYPLTNCGERTAIFKAVSE-G 66

Query: 68 QEILPEVDLYVTLE----PCTMCAAAIS 91
          +    E+ +Y   E    PC  C   + 
Sbjct: 67 KREFSELIVYGQTEKPISPCGACRQVMV 94


>gi|146321901|ref|YP_001201612.1| hypothetical protein SSU98_2054 [Streptococcus suis 98HAH33]
 gi|145692707|gb|ABP93212.1| hypothetical protein SSU98_2054 [Streptococcus suis 98HAH33]
          Length = 32

 Score = 36.0 bits (83), Expect = 1.8,   Method: Composition-based stats.
 Identities = 8/23 (34%), Positives = 16/23 (69%)

Query: 2  KKGNVFMSCALEEAQNAALRNEI 24
          ++   FM+ AL+EA+ +  ++EI
Sbjct: 6  EEKEYFMTQALQEARKSLEKDEI 28


>gi|315222906|ref|ZP_07864785.1| cytidine deaminase [Streptococcus anginosus F0211]
 gi|315187856|gb|EFU21592.1| cytidine deaminase [Streptococcus anginosus F0211]
          Length = 129

 Score = 36.0 bits (83), Expect = 1.9,   Method: Composition-based stats.
 Identities = 21/83 (25%), Positives = 30/83 (36%), Gaps = 6/83 (7%)

Query: 9  SCALEEAQNAALR-NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
            A+E ++ A +  +  P+GAV V  N  I    N       +T   E  AI        
Sbjct: 8  DLAIETSKKAYVPYSHFPIGAVLVAKNGQIFTGVNIENASFGLTNCGERTAIFKAVSEGV 67

Query: 68 QEILPEVDLYVTLE----PCTMC 86
               E+ +Y   E    PC  C
Sbjct: 68 T-DFEELIVYGETEQPVSPCGAC 89


>gi|255658581|ref|ZP_05403990.1| cytidine deaminase [Mitsuokella multacida DSM 20544]
 gi|260849388|gb|EEX69395.1| cytidine deaminase [Mitsuokella multacida DSM 20544]
          Length = 128

 Score = 36.0 bits (83), Expect = 1.9,   Method: Composition-based stats.
 Identities = 20/80 (25%), Positives = 29/80 (36%), Gaps = 5/80 (6%)

Query: 26  VGA-VAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVT---LE 81
           VGA V   + K+     N       V+  AE  AI        ++      +  T     
Sbjct: 26  VGAAVLTKDGKVFG-GCNIENASYPVSNCAERTAIFKAVSEGHRDFAAIAIIADTPGPCS 84

Query: 82  PCTMCAAAISLARIRRLYYG 101
           PC MC  AIS  +I ++   
Sbjct: 85  PCGMCRQAISEFKIPKIIMA 104


>gi|319939044|ref|ZP_08013408.1| cytidine deaminase [Streptococcus anginosus 1_2_62CV]
 gi|319812094|gb|EFW08360.1| cytidine deaminase [Streptococcus anginosus 1_2_62CV]
          Length = 129

 Score = 35.7 bits (82), Expect = 2.0,   Method: Composition-based stats.
 Identities = 21/83 (25%), Positives = 30/83 (36%), Gaps = 6/83 (7%)

Query: 9  SCALEEAQNAALR-NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
            A+E ++ A +  +  P+GAV V  N  I    N       +T   E  AI        
Sbjct: 8  DLAIETSKKAYVPYSHFPIGAVLVAKNGQIFTGVNIENASFGLTNCGERTAIFKAVSEGV 67

Query: 68 QEILPEVDLYVTLE----PCTMC 86
               E+ +Y   E    PC  C
Sbjct: 68 T-DFEELIVYGETEQPVSPCGAC 89


>gi|322369430|ref|ZP_08043995.1| cytidine deaminase [Haladaptatus paucihalophilus DX253]
 gi|320551162|gb|EFW92811.1| cytidine deaminase [Haladaptatus paucihalophilus DX253]
          Length = 128

 Score = 35.7 bits (82), Expect = 2.0,   Method: Composition-based stats.
 Identities = 16/67 (23%), Positives = 25/67 (37%), Gaps = 5/67 (7%)

Query: 8  MSCALEEAQNAALRN-----EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
          M   +E+A+    R      E PVGA     +  +    N        + HAE +AI   
Sbjct: 1  MDELVEQAREIQDRAHVPYSEYPVGAALRTADGTVYVGCNIENANFSNSLHAEEVAIAEA 60

Query: 63 CRILSQE 69
           +   +E
Sbjct: 61 IKSGHRE 67


>gi|164658922|ref|XP_001730586.1| hypothetical protein MGL_2382 [Malassezia globosa CBS 7966]
 gi|159104482|gb|EDP43372.1| hypothetical protein MGL_2382 [Malassezia globosa CBS 7966]
          Length = 492

 Score = 35.7 bits (82), Expect = 2.2,   Method: Composition-based stats.
 Identities = 25/107 (23%), Positives = 36/107 (33%), Gaps = 40/107 (37%)

Query: 10  CALEEAQNAALRNEIP----VGAVAVLNNKIISR----------------AGNRNRELKD 49
            AL+EA +    + +P    VG V  +N   + R                  +R      
Sbjct: 253 LALQEADH---CDSVPTAFSVGCVIAVNGTELCRELPEVDEPMEPLLLTTGYSRELPGN- 308

Query: 50  VTAHAEILAIRMGCRIL-------------SQEILPEVDLYVTLEPC 83
              HAE  A+    R                +E L E+ LY T+EPC
Sbjct: 309 --THAEECAMEKIARHCARTPHVYNIAEARQREPL-ELVLYTTMEPC 352


>gi|262038535|ref|ZP_06011904.1| transcriptional regulator, GntR family [Leptotrichia goodfellowii
           F0264]
 gi|261747404|gb|EEY34874.1| transcriptional regulator, GntR family [Leptotrichia goodfellowii
           F0264]
          Length = 220

 Score = 35.7 bits (82), Expect = 2.3,   Method: Composition-based stats.
 Identities = 18/61 (29%), Positives = 27/61 (44%), Gaps = 5/61 (8%)

Query: 91  SLARIRRLYYGASNPKGGGIENGTQFYTLATC-HHSPEIYPGISEQ--RSRQIIQDFFKE 147
            L RIRR+ YG +N +   IE       L    +   +I   + E+   + Q+  DFFK 
Sbjct: 157 HLHRIRRVLYGENNRRLEAIEEHISIIDLILNENPPIKIIRELCEKHVEAAQM--DFFKN 214

Query: 148 R 148
            
Sbjct: 215 L 215


>gi|167742541|ref|ZP_02415315.1| riboflavin biosynthesis protein RibD [Burkholderia pseudomallei
          14]
 gi|167821693|ref|ZP_02453373.1| riboflavin biosynthesis protein RibD [Burkholderia pseudomallei
          91]
          Length = 60

 Score = 35.7 bits (82), Expect = 2.3,   Method: Composition-based stats.
 Identities = 12/57 (21%), Positives = 18/57 (31%), Gaps = 6/57 (10%)

Query: 4  GNVFMSCALEEAQNAA--LRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILA 58
              M+ AL  A+           VG V     + +    +R         HAE+ A
Sbjct: 8  DRTHMAHALRLAEQGLYTTHPNPRVGCVIARGARTLGAGWHRRAGE----PHAEVHA 60


>gi|309800089|ref|ZP_07694283.1| cytidine deaminase [Streptococcus infantis SK1302]
 gi|308116291|gb|EFO53773.1| cytidine deaminase [Streptococcus infantis SK1302]
          Length = 129

 Score = 35.7 bits (82), Expect = 2.4,   Method: Composition-based stats.
 Identities = 21/88 (23%), Positives = 34/88 (38%), Gaps = 6/88 (6%)

Query: 9  SCALEEAQNAALR-NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
            A+E ++NA +  +  P+GAV V  +  +    N       +T   E  AI        
Sbjct: 8  DLAIETSKNAYVPYSHFPIGAVLVAKDGSVYTGCNIENASYPLTNCGERTAIFKAISEGQ 67

Query: 68 QEILPEVDLYVTLE----PCTMCAAAIS 91
          +E   E+ +Y   E    PC  C   + 
Sbjct: 68 RE-FSELIVYGQTEKPISPCGACRQVMV 94


>gi|193690615|ref|XP_001950380.1| PREDICTED: hypothetical protein LOC100165452 [Acyrthosiphon pisum]
          Length = 998

 Score = 35.7 bits (82), Expect = 2.5,   Method: Composition-based stats.
 Identities = 9/54 (16%), Positives = 14/54 (25%), Gaps = 10/54 (18%)

Query: 38  SRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE-------PCT 84
           +   N     KD T+   +        I       +  +Y   E       PC 
Sbjct: 915 ATGRNTVYTTKDPTS---VTCEEEDGHISYHPDKADCTMYYMCEGERKHHMPCP 965


>gi|255931995|ref|XP_002557554.1| Pc12g07190 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211582173|emb|CAP80346.1| Pc12g07190 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 227

 Score = 35.7 bits (82), Expect = 2.5,   Method: Composition-based stats.
 Identities = 27/139 (19%), Positives = 45/139 (32%), Gaps = 43/139 (30%)

Query: 4   GNVFMSCALEEAQNAALRNEIP----VGAVAVL---------NNKIISRAGNRNRELKDV 50
              ++   L  A+ +  R   P    VGAV +          +++I+S            
Sbjct: 8   HIPYIKQCLSLAEKSPPR---PTNFRVGAVLLSRKDNDPTFTDDRILSTGYTMELAGN-- 62

Query: 51  TAHAEILAI-----------RMGCRILSQEILPEVDLYVTLEPC-------TMCAAAISL 92
             HAE                    +L  E   ++ +YVT+EPC         C   I+ 
Sbjct: 63  -THAEQCCFANYAAVHKVPDDQVGEVLPVEPGRKLVMYVTMEPCGKRLSGNAPCVQRITR 121

Query: 93  A------RIRRLYYGASNP 105
                   I ++Y+G   P
Sbjct: 122 TTEGGREGIHKVYFGVKEP 140


>gi|289167737|ref|YP_003446006.1| cytidine deaminase [Streptococcus mitis B6]
 gi|288907304|emb|CBJ22140.1| cytidine deaminase [Streptococcus mitis B6]
          Length = 129

 Score = 35.7 bits (82), Expect = 2.5,   Method: Composition-based stats.
 Identities = 21/83 (25%), Positives = 31/83 (37%), Gaps = 6/83 (7%)

Query: 9  SCALEEAQNAALR-NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
            A+E ++ A +  +  PVGAV V  +       N       +T   E  AI        
Sbjct: 8  ELAIETSKKAYVPYSHFPVGAVLVAKDGNTYTGVNIENASYSLTNCGERTAIFKAVSEGQ 67

Query: 68 QEILPEVDLYVTLE----PCTMC 86
          +E   E+ +Y   E    PC  C
Sbjct: 68 RE-FSELIVYGQTEKPISPCGAC 89


>gi|330723755|gb|AEC46125.1| deoxycytidylate deaminase [Mycoplasma hyorhinis MCLD]
          Length = 93

 Score = 35.3 bits (81), Expect = 2.6,   Method: Composition-based stats.
 Identities = 20/81 (24%), Positives = 29/81 (35%), Gaps = 26/81 (32%)

Query: 1  MKKGNVFMSCALEEAQNAALRNEIP---VGAVAV-LNNKIISRAGNRNRELKDV------ 50
          +     F    L  A+ +A R++ P   VGA  V   N+++    N   +  DV      
Sbjct: 6  INWNEYF----LALAKISAKRSKDPNTQVGACIVSKQNRVLGIGYNGMPKGNDVDFPWSK 61

Query: 51 ------------TAHAEILAI 59
                        HAEI AI
Sbjct: 62 DSNKASEVKYSYVIHAEINAI 82


>gi|73969580|ref|XP_538369.2| PREDICTED: similar to ARP10 protein [Canis familiaris]
          Length = 185

 Score = 35.3 bits (81), Expect = 2.6,   Method: Composition-based stats.
 Identities = 15/41 (36%), Positives = 17/41 (41%), Gaps = 1/41 (2%)

Query: 52 AHAEILAIRMG-CRILSQEILPEVDLYVTLEPCTMCAAAIS 91
           HAEI  I     R L      E+  YVT  PC  CA  + 
Sbjct: 46 RHAEICFIDDIKSRQLDPSQKFEITCYVTWSPCPTCAKKLI 86


>gi|229270205|gb|ACQ55229.1| polyprotein 1ab [Infectious bronchitis virus]
          Length = 6611

 Score = 35.3 bits (81), Expect = 2.7,   Method: Composition-based stats.
 Identities = 31/133 (23%), Positives = 43/133 (32%), Gaps = 17/133 (12%)

Query: 27   GAVAVLNNKIISRAGNRNRELKDV----------TAHAEILAIR-MGCRILSQEILPEVD 75
            G   V N++ I R GN  R+              T H  +L+I    C            
Sbjct: 4853 GVCVVCNSQTILRCGNCIRKPFLCCKCCYDHVMHTDHKNVLSINPYICSQPGCGEADVTK 4912

Query: 76   LYVTLEPCTMCAAAISLARIRRL----YYGASNPKGGGIENGTQFYTLATCHHSPEIYPG 131
            LY+   P   C        I  +     +G       G EN   F  LAT + S  + P 
Sbjct: 4913 LYLGGMPY-FCGNHKPKLSIPLVSNGTVFGIYRANCAGSENVDDFNQLATTNWST-VEPY 4970

Query: 132  ISEQRSRQIIQDF 144
            I   R    ++ F
Sbjct: 4971 ILANRCSDSLRRF 4983


>gi|168008266|ref|XP_001756828.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162692066|gb|EDQ78425.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 550

 Score = 35.3 bits (81), Expect = 2.7,   Method: Composition-based stats.
 Identities = 25/132 (18%), Positives = 45/132 (34%), Gaps = 18/132 (13%)

Query: 4   GNVFMSCALEEAQNA-ALRNEIP-VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM 61
            +  M  A+E A+++  L    P  G V     +I+   G   +  +     AE+ A+  
Sbjct: 1   DSAHMLKAVELAESSNGLTAPHPKFGCVIARGRRIVGGGGLYGQGARS----AEVQAVEE 56

Query: 62  GCRILSQEILPEVDLYVTLEP--C---TMCAAAISLARIRRLYYGASNPKGGGIENGTQF 116
                 +E       +++LEP  C       AA+    + R+  G  +P           
Sbjct: 57  A-----REQARGATAFLSLEPGDCGGDDAAIAALVQGGLGRVVVGMRHPLAHFRGKA--I 109

Query: 117 YTLATCHHSPEI 128
             L       E+
Sbjct: 110 AALRRAGVRVEV 121


>gi|310823757|ref|YP_003956115.1| amidohydrolase family [Stigmatella aurantiaca DW4/3-1]
 gi|309396829|gb|ADO74288.1| Amidohydrolase family [Stigmatella aurantiaca DW4/3-1]
          Length = 478

 Score = 35.3 bits (81), Expect = 2.7,   Method: Composition-based stats.
 Identities = 7/23 (30%), Positives = 12/23 (52%)

Query: 22 NEIPVGAVAVLNNKIISRAGNRN 44
           +IP G+V V   +I++   N  
Sbjct: 62 GDIPGGSVLVRQGQILAVGRNLV 84


>gi|291164937|gb|ADD80966.1| gp075 [Rhodococcus phage ReqiPepy6]
          Length = 299

 Score = 35.3 bits (81), Expect = 2.9,   Method: Composition-based stats.
 Identities = 15/47 (31%), Positives = 19/47 (40%), Gaps = 4/47 (8%)

Query: 53  HAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLY 99
           HAE   I                LY+T EPC +C   IS   I+R+ 
Sbjct: 87  HAEWNVIIRTAHHQ----FANSTLYITDEPCHICKVLISGTAIQRVV 129


>gi|115374580|ref|ZP_01461860.1| amidohydrolase family [Stigmatella aurantiaca DW4/3-1]
 gi|115368450|gb|EAU67405.1| amidohydrolase family [Stigmatella aurantiaca DW4/3-1]
          Length = 531

 Score = 35.3 bits (81), Expect = 2.9,   Method: Composition-based stats.
 Identities = 7/23 (30%), Positives = 12/23 (52%)

Query: 22  NEIPVGAVAVLNNKIISRAGNRN 44
            +IP G+V V   +I++   N  
Sbjct: 115 GDIPGGSVLVRQGQILAVGRNLV 137


>gi|270292562|ref|ZP_06198773.1| cytidine deaminase [Streptococcus sp. M143]
 gi|270278541|gb|EFA24387.1| cytidine deaminase [Streptococcus sp. M143]
          Length = 129

 Score = 35.3 bits (81), Expect = 3.0,   Method: Composition-based stats.
 Identities = 21/88 (23%), Positives = 33/88 (37%), Gaps = 6/88 (6%)

Query: 9  SCALEEAQNAALR-NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
            A+E ++ A +  +  P+GAV V  +  I    N       +T   E  AI        
Sbjct: 8  ELAIETSKYAYVPYSHFPIGAVLVAKDGSIYTGVNIENASYPLTNCGERTAIFKAVSEGQ 67

Query: 68 QEILPEVDLYVTLE----PCTMCAAAIS 91
          +E   E+ +Y   E    PC  C   + 
Sbjct: 68 RE-FSELIVYGQTEKPISPCGACRQVMV 94


>gi|66818217|ref|XP_642768.1| hypothetical protein DDB_G0277355 [Dictyostelium discoideum AX4]
 gi|60470892|gb|EAL68864.1| hypothetical protein DDB_G0277355 [Dictyostelium discoideum AX4]
          Length = 299

 Score = 35.3 bits (81), Expect = 3.1,   Method: Composition-based stats.
 Identities = 13/90 (14%), Positives = 28/90 (31%), Gaps = 16/90 (17%)

Query: 49  DVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGG 108
           ++ +H EI+AI     +          LY +     +C   I ++ I             
Sbjct: 104 NIISHGEIVAINNCTALHGITSFTNYTLYTSGGNDLLC--KICMSNIP------------ 149

Query: 109 GIENGTQFYTLATCH-HSPEIYPGISEQRS 137
            +++   F          P +  G+    +
Sbjct: 150 -MDSSYIFGRYYGLRASPPRVIGGVLRTEA 178


>gi|301757545|ref|XP_002914629.1| PREDICTED: DNA dC->dU-editing enzyme APOBEC-3G-like [Ailuropoda
           melanoleuca]
          Length = 198

 Score = 34.9 bits (80), Expect = 3.4,   Method: Composition-based stats.
 Identities = 13/69 (18%), Positives = 26/69 (37%), Gaps = 8/69 (11%)

Query: 23  EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILP-EVDLYVTLE 81
            +P+G     +  I+    N+  +  + + HAE   +           L   V  +++  
Sbjct: 45  GVPLG----QDKGIL---HNKPAQGPEPSRHAECYLLEQIQSWNLDPKLHYGVTCFLSWS 97

Query: 82  PCTMCAAAI 90
           PC  CA  +
Sbjct: 98  PCAKCAQKM 106


>gi|194692626|gb|ACF80397.1| unknown [Zea mays]
          Length = 74

 Score = 34.9 bits (80), Expect = 3.4,   Method: Composition-based stats.
 Identities = 12/28 (42%), Positives = 15/28 (53%)

Query: 85  MCAAAISLARIRRLYYGASNPKGGGIEN 112
           MC  A+ L+RI+RL YGA       I  
Sbjct: 1   MCFGAVHLSRIKRLVYGAKAEAAIAIGF 28


>gi|282598561|gb|ADA83536.1| replicase polyprotein 1ab [Infectious bronchitis virus]
          Length = 6630

 Score = 34.9 bits (80), Expect = 3.4,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 18/46 (39%), Gaps = 1/46 (2%)

Query: 99   YYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
             +G       G E+   F  LAT + S  + P I   R    ++ F
Sbjct: 4958 VFGIYRANCAGSESVDDFNQLATTNWST-VEPYILANRCSDSLRRF 5002


>gi|282598550|gb|ADA83526.1| replicase polyprotein 1ab [Infectious bronchitis virus]
          Length = 6630

 Score = 34.9 bits (80), Expect = 3.4,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 18/46 (39%), Gaps = 1/46 (2%)

Query: 99   YYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
             +G       G E+   F  LAT + S  + P I   R    ++ F
Sbjct: 4958 VFGIYRANCAGSESVDDFNQLATTNWST-VEPYILANRCSDSLRRF 5002


>gi|282598539|gb|ADA83516.1| replicase polyprotein 1ab [Infectious bronchitis virus]
          Length = 6630

 Score = 34.9 bits (80), Expect = 3.4,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 18/46 (39%), Gaps = 1/46 (2%)

Query: 99   YYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
             +G       G E+   F  LAT + S  + P I   R    ++ F
Sbjct: 4958 VFGIYRANCAGSESVDDFNQLATTNWST-VEPYILANRCSDSLRRF 5002


>gi|282598528|gb|ADA83506.1| replicase polyprotein 1ab [Infectious bronchitis virus]
          Length = 6630

 Score = 34.9 bits (80), Expect = 3.4,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 18/46 (39%), Gaps = 1/46 (2%)

Query: 99   YYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
             +G       G E+   F  LAT + S  + P I   R    ++ F
Sbjct: 4958 VFGIYRANCAGSESVDDFNQLATTNWST-VEPYILANRCSDSLRRF 5002


>gi|282598517|gb|ADA83496.1| replicase polyprotein 1ab [Infectious bronchitis virus]
          Length = 6619

 Score = 34.9 bits (80), Expect = 3.4,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 18/46 (39%), Gaps = 1/46 (2%)

Query: 99   YYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
             +G       G E+   F  LAT + S  + P I   R    ++ F
Sbjct: 4947 VFGIYRANCAGSESVDDFNQLATTNWST-VEPYILANRCSDSLRRF 4991


>gi|282598506|gb|ADA83486.1| replicase polyprotein 1ab [Infectious bronchitis virus]
          Length = 6631

 Score = 34.9 bits (80), Expect = 3.4,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 18/46 (39%), Gaps = 1/46 (2%)

Query: 99   YYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
             +G       G E+   F  LAT + S  + P I   R    ++ F
Sbjct: 4959 VFGIYRANCAGSESVDDFNQLATTNWST-VEPYILANRCSDSLRRF 5003


>gi|310696870|gb|ADP06493.1| polyprotein 1ab [Infectious bronchitis virus]
          Length = 6631

 Score = 34.9 bits (80), Expect = 3.4,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 18/46 (39%), Gaps = 1/46 (2%)

Query: 99   YYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
             +G       G E+   F  LAT + S  + P I   R    ++ F
Sbjct: 4959 VFGIYRANCAGSESVDDFNQLATTNWST-VEPYILANRCSDSLRRF 5003


>gi|310696858|gb|ADP06482.1| polyprotein 1ab [Infectious bronchitis virus]
          Length = 6620

 Score = 34.9 bits (80), Expect = 3.4,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 18/46 (39%), Gaps = 1/46 (2%)

Query: 99   YYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
             +G       G E+   F  LAT + S  + P I   R    ++ F
Sbjct: 4948 VFGIYRANCAGSESVDDFNQLATTNWST-VEPYILANRCSDSLRRF 4992


>gi|258676528|gb|ACV87277.1| polyprotein 1ab [Turkey coronavirus]
          Length = 6602

 Score = 34.9 bits (80), Expect = 3.4,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 18/46 (39%), Gaps = 1/46 (2%)

Query: 99   YYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
             +G       G E+   F  LAT + S  + P I   R    ++ F
Sbjct: 4956 VFGIYRANCAGSESVDDFNQLATTNWST-VEPYILANRCSDSLRRF 5000


>gi|258676504|gb|ACV87255.1| polyprotein 1ab [Turkey coronavirus]
          Length = 6602

 Score = 34.9 bits (80), Expect = 3.4,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 18/46 (39%), Gaps = 1/46 (2%)

Query: 99   YYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
             +G       G E+   F  LAT + S  + P I   R    ++ F
Sbjct: 4954 VFGIYRANCAGSESVDDFNQLATTNWST-VEPYILANRCSDSLRRF 4998


>gi|171988308|gb|ACB59371.1| 1ab polyprotein [Infectious bronchitis virus]
          Length = 6610

 Score = 34.9 bits (80), Expect = 3.4,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 18/46 (39%), Gaps = 1/46 (2%)

Query: 99   YYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
             +G       G E+   F  LAT + S  + P I   R    ++ F
Sbjct: 4938 VFGIYRANCAGSESVDDFNQLATTNWST-VEPYILANRCSDSLRRF 4982


>gi|171988297|gb|ACB59361.1| 1ab polyprotein [Infectious bronchitis virus]
          Length = 6610

 Score = 34.9 bits (80), Expect = 3.4,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 18/46 (39%), Gaps = 1/46 (2%)

Query: 99   YYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
             +G       G E+   F  LAT + S  + P I   R    ++ F
Sbjct: 4938 VFGIYRANCAGSESVDDFNQLATTNWST-VEPYILANRCSDSLRRF 4982


>gi|41324069|gb|AAS00078.1| 1ab [Infectious bronchitis virus]
          Length = 6631

 Score = 34.9 bits (80), Expect = 3.4,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 18/46 (39%), Gaps = 1/46 (2%)

Query: 99   YYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
             +G       G E+   F  LAT + S  + P I   R    ++ F
Sbjct: 4959 VFGIYRANCAGSESVDDFNQLATTNWST-VEPYILANRCSDSLRRF 5003


>gi|148986072|ref|ZP_01819093.1| cytidine deaminase [Streptococcus pneumoniae SP3-BS71]
 gi|148992510|ref|ZP_01822205.1| cytidine deaminase [Streptococcus pneumoniae SP9-BS68]
 gi|149010528|ref|ZP_01831899.1| cytidine deaminase [Streptococcus pneumoniae SP19-BS75]
 gi|149021708|ref|ZP_01835739.1| cytidine deaminase [Streptococcus pneumoniae SP23-BS72]
 gi|168489783|ref|ZP_02713982.1| cytidine deaminase [Streptococcus pneumoniae SP195]
 gi|182683756|ref|YP_001835503.1| cytidine deaminase [Streptococcus pneumoniae CGSP14]
 gi|225858644|ref|YP_002740154.1| cytidine deaminase [Streptococcus pneumoniae 70585]
 gi|303254020|ref|ZP_07340138.1| cytidine deaminase [Streptococcus pneumoniae BS455]
 gi|303260305|ref|ZP_07346276.1| cytidine deaminase [Streptococcus pneumoniae SP-BS293]
 gi|303261511|ref|ZP_07347459.1| cytidine deaminase [Streptococcus pneumoniae SP14-BS292]
 gi|303264180|ref|ZP_07350101.1| cytidine deaminase [Streptococcus pneumoniae BS397]
 gi|303267046|ref|ZP_07352918.1| cytidine deaminase [Streptococcus pneumoniae BS457]
 gi|303269192|ref|ZP_07354969.1| cytidine deaminase [Streptococcus pneumoniae BS458]
 gi|147765009|gb|EDK71938.1| cytidine deaminase [Streptococcus pneumoniae SP19-BS75]
 gi|147921906|gb|EDK73032.1| cytidine deaminase [Streptococcus pneumoniae SP3-BS71]
 gi|147928827|gb|EDK79840.1| cytidine deaminase [Streptococcus pneumoniae SP9-BS68]
 gi|147930169|gb|EDK81155.1| cytidine deaminase [Streptococcus pneumoniae SP23-BS72]
 gi|182629090|gb|ACB90038.1| cytidine deaminase [Streptococcus pneumoniae CGSP14]
 gi|183571765|gb|EDT92293.1| cytidine deaminase [Streptococcus pneumoniae SP195]
 gi|225721793|gb|ACO17647.1| cytidine deaminase [Streptococcus pneumoniae 70585]
 gi|301799841|emb|CBW32413.1| cytidine deaminase [Streptococcus pneumoniae OXC141]
 gi|301801671|emb|CBW34374.1| cytidine deaminase [Streptococcus pneumoniae INV200]
 gi|302599000|gb|EFL66028.1| cytidine deaminase [Streptococcus pneumoniae BS455]
 gi|302637645|gb|EFL68132.1| cytidine deaminase [Streptococcus pneumoniae SP14-BS292]
 gi|302638629|gb|EFL69093.1| cytidine deaminase [Streptococcus pneumoniae SP-BS293]
 gi|302641256|gb|EFL71626.1| cytidine deaminase [Streptococcus pneumoniae BS458]
 gi|302643440|gb|EFL73715.1| cytidine deaminase [Streptococcus pneumoniae BS457]
 gi|302646585|gb|EFL76811.1| cytidine deaminase [Streptococcus pneumoniae BS397]
 gi|332073171|gb|EGI83650.1| cytidine deaminase [Streptococcus pneumoniae GA17570]
          Length = 129

 Score = 34.9 bits (80), Expect = 3.5,   Method: Composition-based stats.
 Identities = 20/88 (22%), Positives = 34/88 (38%), Gaps = 6/88 (6%)

Query: 9  SCALEEAQNAALR-NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
            A+E +++A +  +  P+GAV V  +  +    N       +T   E  AI        
Sbjct: 8  ELAIETSKHAYVPYSHFPIGAVLVAKDGNVYTGVNIENASYPLTNCGERTAIFKAISEGQ 67

Query: 68 QEILPEVDLYVTLE----PCTMCAAAIS 91
          +E   E+ +Y   E    PC  C   + 
Sbjct: 68 RE-FSELIVYGQTEKPISPCGACRQVMV 94


>gi|322385395|ref|ZP_08059040.1| cytidine deaminase [Streptococcus cristatus ATCC 51100]
 gi|321270654|gb|EFX53569.1| cytidine deaminase [Streptococcus cristatus ATCC 51100]
          Length = 129

 Score = 34.9 bits (80), Expect = 3.7,   Method: Composition-based stats.
 Identities = 19/66 (28%), Positives = 23/66 (34%), Gaps = 5/66 (7%)

Query: 25 PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE--- 81
          PVGAV V  N  +    N       +T  AE  AI             E+ +Y   E   
Sbjct: 25 PVGAVLVAKNGQVFTGVNIENASFGLTNCAERTAIFKAVSE-GFLDFEELIVYGETEKPI 83

Query: 82 -PCTMC 86
           PC  C
Sbjct: 84 SPCGAC 89


>gi|145603526|ref|XP_369478.2| conserved hypothetical protein [Magnaporthe oryzae 70-15]
 gi|145011740|gb|EDJ96396.1| conserved hypothetical protein [Magnaporthe oryzae 70-15]
          Length = 806

 Score = 34.9 bits (80), Expect = 3.7,   Method: Composition-based stats.
 Identities = 20/90 (22%), Positives = 29/90 (32%), Gaps = 34/90 (37%)

Query: 1   MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDV---------- 50
           MK    F +  LE+A  + LR     G++ V   K+I +  N  R   D           
Sbjct: 604 MKSDTYF-NVCLEQAALSPLRYRH--GSIVVKGGKVIGKGFNDFRPGYDGGHINSCQTPA 660

Query: 51  ---------------------TAHAEILAI 59
                                + HAE+ AI
Sbjct: 661 NATLLDRSRLEQALPGANVAMSMHAEMAAI 690


>gi|119190075|ref|XP_001245644.1| hypothetical protein CIMG_05085 [Coccidioides immitis RS]
          Length = 232

 Score = 34.9 bits (80), Expect = 3.7,   Method: Composition-based stats.
 Identities = 17/43 (39%), Positives = 21/43 (48%), Gaps = 13/43 (30%)

Query: 76  LYVTLEPCT-------MCAAAISLAR------IRRLYYGASNP 105
           +YVT+EPC         CAA I  AR      I R+Y+G   P
Sbjct: 118 MYVTMEPCGKRLSGNKPCAARIVEARNHGRAGIDRVYFGVKEP 160


>gi|212533865|ref|XP_002147089.1| DRAP deaminase, putative [Penicillium marneffei ATCC 18224]
 gi|210072453|gb|EEA26542.1| DRAP deaminase, putative [Penicillium marneffei ATCC 18224]
          Length = 240

 Score = 34.9 bits (80), Expect = 3.8,   Method: Composition-based stats.
 Identities = 30/150 (20%), Positives = 45/150 (30%), Gaps = 52/150 (34%)

Query: 2   KKGNVFMSCALEEAQNAALRNEIP----VGAVAVLNN----------KIISRAGNRNREL 47
                ++   L+ A+N+  R   P    VGA+ +L +          KI+S         
Sbjct: 15  SSHLKYLRECLKLAENSPPR---PTNFRVGAILILRHDTPDDTSDDDKILSTGYTMELPG 71

Query: 48  KDVTAHAEILAIRMGCRILSQEILPEVD--------------LYVTLEPC-------TMC 86
                HAE   ++              D              LYVT+EPC         C
Sbjct: 72  N---THAEQCCLQNYAAAHGVYEESVADAFPPAAERNGRKILLYVTMEPCGVRLSGNRPC 128

Query: 87  AAAISLAR-----------IRRLYYGASNP 105
              I   R           I ++Y+G   P
Sbjct: 129 VHRIIQTRKSSNDSNNNNGIDKVYFGVKEP 158


>gi|307325199|ref|ZP_07604402.1| conserved hypothetical protein [Streptomyces violaceusniger Tu
           4113]
 gi|306889003|gb|EFN19986.1| conserved hypothetical protein [Streptomyces violaceusniger Tu
           4113]
          Length = 280

 Score = 34.9 bits (80), Expect = 3.9,   Method: Composition-based stats.
 Identities = 18/81 (22%), Positives = 28/81 (34%), Gaps = 19/81 (23%)

Query: 28  AVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCA 87
           AV +     +SR G       D  AHA            +   + +  L V   PC   A
Sbjct: 144 AVVL-----VSRGG------ADALAHA------YAHFSEAGPRVEQYVLAVVG-PCPYAA 185

Query: 88  AAISL-ARIRRLYYGASNPKG 107
             I+    + R+ +   +PK 
Sbjct: 186 GEITATLGVGRVVFLPWDPKA 206


>gi|282849126|ref|ZP_06258511.1| cytidine deaminase [Veillonella parvula ATCC 17745]
 gi|282580830|gb|EFB86228.1| cytidine deaminase [Veillonella parvula ATCC 17745]
          Length = 131

 Score = 34.9 bits (80), Expect = 4.0,   Method: Composition-based stats.
 Identities = 19/79 (24%), Positives = 25/79 (31%), Gaps = 3/79 (3%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTM 85
           VGA  +  +  I    N       +T  AE  AI         +      +  T  PC  
Sbjct: 29  VGAALLCEDGTIYEGCNIENASYGLTNCAERTAIFKAVSEGQTKFKALAVVADTEGPCAP 88

Query: 86  CAAA---ISLARIRRLYYG 101
           C A    IS   I R+   
Sbjct: 89  CGACRQVISEFEIPRIIMA 107


>gi|145542321|ref|XP_001456848.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124424661|emb|CAK89451.1| unnamed protein product [Paramecium tetraurelia]
          Length = 451

 Score = 34.9 bits (80), Expect = 4.2,   Method: Composition-based stats.
 Identities = 6/17 (35%), Positives = 10/17 (58%)

Query: 133 SEQRSRQIIQDFFKERR 149
             +    I++ FFK+RR
Sbjct: 380 RAKECLAILKQFFKKRR 396


>gi|148997081|ref|ZP_01824735.1| cytidine deaminase [Streptococcus pneumoniae SP11-BS70]
 gi|168575499|ref|ZP_02721435.1| cytidine deaminase [Streptococcus pneumoniae MLV-016]
 gi|194398262|ref|YP_002037479.1| cytidine deaminase [Streptococcus pneumoniae G54]
 gi|225854350|ref|YP_002735862.1| cytidine deaminase [Streptococcus pneumoniae JJA]
 gi|225856510|ref|YP_002738021.1| cytidine deaminase [Streptococcus pneumoniae P1031]
 gi|307067440|ref|YP_003876406.1| cytidine deaminase [Streptococcus pneumoniae AP200]
 gi|147756781|gb|EDK63821.1| cytidine deaminase [Streptococcus pneumoniae SP11-BS70]
 gi|183578488|gb|EDT99016.1| cytidine deaminase [Streptococcus pneumoniae MLV-016]
 gi|194357929|gb|ACF56377.1| cytidine deaminase [Streptococcus pneumoniae G54]
 gi|225722690|gb|ACO18543.1| cytidine deaminase [Streptococcus pneumoniae JJA]
 gi|225725802|gb|ACO21654.1| cytidine deaminase [Streptococcus pneumoniae P1031]
 gi|306408977|gb|ADM84404.1| Cytidine deaminase [Streptococcus pneumoniae AP200]
          Length = 129

 Score = 34.9 bits (80), Expect = 4.2,   Method: Composition-based stats.
 Identities = 20/88 (22%), Positives = 34/88 (38%), Gaps = 6/88 (6%)

Query: 9  SCALEEAQNAALR-NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
            A+E +++A +  +  P+GAV V  +  +    N       +T   E  AI        
Sbjct: 8  ELAIETSKHAYVPYSHFPIGAVLVAKDGSVYTGVNIENASYPLTNCGERTAIFKAISEGQ 67

Query: 68 QEILPEVDLYVTLE----PCTMCAAAIS 91
          +E   E+ +Y   E    PC  C   + 
Sbjct: 68 RE-FSELIVYGQTEKPISPCGACRQVMV 94


>gi|260909112|gb|ACX54193.1| APOBEC3 [Camelus dromedarius]
          Length = 209

 Score = 34.9 bits (80), Expect = 4.2,   Method: Composition-based stats.
 Identities = 17/60 (28%), Positives = 25/60 (41%), Gaps = 5/60 (8%)

Query: 33 NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILP-EVDLYVTLEPCTMCAAAIS 91
          N  I+++   RN++      HAEI  I     +        E+  YVT  PC  CA  + 
Sbjct: 40 NGSILAQGCVRNKKQ----RHAEIRFIDKINFMNLDPNQSYEIICYVTWSPCPTCAEKLV 95


>gi|156546430|ref|XP_001607164.1| PREDICTED: similar to ENSANGP00000028556 [Nasonia vitripennis]
          Length = 1060

 Score = 34.9 bits (80), Expect = 4.2,   Method: Composition-based stats.
 Identities = 12/28 (42%), Positives = 17/28 (60%)

Query: 51  TAHAEILAIRMGCRILSQEILPEVDLYV 78
             HAE+LAIR  C+ L  +  P++ L V
Sbjct: 889 IMHAELLAIRKACQSLQADYKPKITLLV 916


>gi|262277170|ref|ZP_06054963.1| hypothetical protein HIMB114_0582 [alpha proteobacterium HIMB114]
 gi|262224273|gb|EEY74732.1| hypothetical protein HIMB114_0582 [alpha proteobacterium HIMB114]
          Length = 357

 Score = 34.5 bits (79), Expect = 4.7,   Method: Composition-based stats.
 Identities = 17/61 (27%), Positives = 24/61 (39%), Gaps = 12/61 (19%)

Query: 26 VGAV-AVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84
          VGA     NN I     +     K+ + HAE   ++   +    E      LY +LEPC 
Sbjct: 34 VGAAGIDKNNHI-----HLAVTGKNGSPHAEFALLKNKKKNFINE------LYTSLEPCC 82

Query: 85 M 85
           
Sbjct: 83 H 83


>gi|86143914|ref|ZP_01062282.1| cytidine deaminase [Leeuwenhoekiella blandensis MED217]
 gi|85829621|gb|EAQ48084.1| cytidine deaminase [Leeuwenhoekiella blandensis MED217]
          Length = 160

 Score = 34.5 bits (79), Expect = 4.8,   Method: Composition-based stats.
 Identities = 22/111 (19%), Positives = 38/111 (34%), Gaps = 20/111 (18%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKDVTAH-AEILAIRMGCRILSQEILPEVDLYVTLE--- 81
           VGA  +L+N  I +  N+       +   AE  AI         E L  + +  T +   
Sbjct: 46  VGAALLLSNGEIVKGSNQENAAY-PSGLCAERTAIYYAGANFPDEKLEVMAISATGKRKP 104

Query: 82  ------PCTMCAAAISLARIRR----LYYGASNPKGGGIENGTQFYTLATC 122
                 PC  C  AI+   +++    + Y       G      +  +L+  
Sbjct: 105 STTPIPPCGACRQAIAEYEVKQKQPVVIY-----FMGASGKVFKSDSLSNL 150


>gi|121715970|ref|XP_001275594.1| cytidine and deoxycytidylate deaminase zinc-binding domain protein
           [Aspergillus clavatus NRRL 1]
 gi|119403751|gb|EAW14168.1| cytidine and deoxycytidylate deaminase zinc-binding domain protein
           [Aspergillus clavatus NRRL 1]
          Length = 217

 Score = 34.5 bits (79), Expect = 4.9,   Method: Composition-based stats.
 Identities = 26/139 (18%), Positives = 46/139 (33%), Gaps = 43/139 (30%)

Query: 4   GNVFMSCALEEAQNAALRNEIP----VGAVAV---------LNNKIISRAGNRNRELKDV 50
              ++   L  A+ +  R   P    VGA+ +          ++ ++S            
Sbjct: 6   HFDYLRQCLSLAERSPPR---PTNFRVGAMLLSRRDGDIECKDDCVLSTGYTMELAGN-- 60

Query: 51  TAHAEILAI-----------RMGCRILSQEILPEVDLYVTLEPC-------TMCAAAISL 92
             HAE   +                +L  E   ++ +YVT+EPC         C   I  
Sbjct: 61  -THAEQCCLSNFAAVHSVPEDRVAEVLPAEPGRKLVMYVTMEPCGKRLSGNVPCVQRIID 119

Query: 93  AR------IRRLYYGASNP 105
            R      I+++Y+G   P
Sbjct: 120 TRAGGRPGIQKVYFGVKEP 138


>gi|221231628|ref|YP_002510780.1| cytidine deaminase [Streptococcus pneumoniae ATCC 700669]
 gi|220674088|emb|CAR68605.1| cytidine deaminase [Streptococcus pneumoniae ATCC 700669]
          Length = 129

 Score = 34.5 bits (79), Expect = 5.0,   Method: Composition-based stats.
 Identities = 20/88 (22%), Positives = 34/88 (38%), Gaps = 6/88 (6%)

Query: 9  SCALEEAQNAALR-NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
            A+E +++A +  +  P+GAV V  +  +    N       +T   E  AI        
Sbjct: 8  ELAIETSKHAYVPYSHFPIGAVLVAKDGSVYTGVNIENASYPLTNCGERTAIFKAISEGQ 67

Query: 68 QEILPEVDLYVTLE----PCTMCAAAIS 91
          +E   E+ +Y   E    PC  C   + 
Sbjct: 68 RE-FSELIVYGQTEKPISPCGACRQVMV 94


>gi|6523085|emb|CAB62343.1| putative protein [Arabidopsis thaliana]
          Length = 276

 Score = 34.5 bits (79), Expect = 5.0,   Method: Composition-based stats.
 Identities = 10/25 (40%), Positives = 14/25 (56%)

Query: 76  LYVTLEPCTMCAAAISLARIRRLYY 100
           LYVT+ PC  CA  I  + +  + Y
Sbjct: 221 LYVTMFPCNECAKIILQSGVAEVIY 245


>gi|89100469|ref|ZP_01173331.1| cytidine deaminase [Bacillus sp. NRRL B-14911]
 gi|89084812|gb|EAR63951.1| cytidine deaminase [Bacillus sp. NRRL B-14911]
          Length = 132

 Score = 34.5 bits (79), Expect = 5.0,   Method: Composition-based stats.
 Identities = 17/86 (19%), Positives = 27/86 (31%), Gaps = 6/86 (6%)

Query: 12 LEEAQNAALRN-----EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRIL 66
          +EEA+ A  +        PVGA  +  +  I    N       +   AE  A+       
Sbjct: 7  IEEAKKARDKAYVPYSNFPVGAALLTEDGKIYHGCNIENAAYSMCNCAERTALFKAYSEG 66

Query: 67 SQEILPEVDLYVTLEPCTMCAAAISL 92
           ++      +  T  P   C  A   
Sbjct: 67 DKKYTAMAVVADTERPVPPC-GACRQ 91


>gi|297380640|gb|ADI35527.1| riboflavin biosynthesis protein (ribG) [Helicobacter pylori v225d]
          Length = 276

 Score = 34.5 bits (79), Expect = 5.3,   Method: Composition-based stats.
 Identities = 10/55 (18%), Positives = 20/55 (36%), Gaps = 8/55 (14%)

Query: 64  RILSQEILPEVDLYVTLEPC------TMCAAAISLARIRRLYYGAS--NPKGGGI 110
           +        +    +TLEPC        C+  + + + +R+         K GG+
Sbjct: 19  KTHHNNAFKDCVFLITLEPCNSYGKTPACSGLLEILKPKRVVIATEENEAKKGGL 73


>gi|307127607|ref|YP_003879638.1| cytidine deaminase [Streptococcus pneumoniae 670-6B]
 gi|306484669|gb|ADM91538.1| cytidine deaminase [Streptococcus pneumoniae 670-6B]
 gi|332077255|gb|EGI87717.1| cytidine deaminase [Streptococcus pneumoniae GA17545]
 gi|332204848|gb|EGJ18913.1| cytidine deaminase [Streptococcus pneumoniae GA47901]
          Length = 129

 Score = 34.5 bits (79), Expect = 5.3,   Method: Composition-based stats.
 Identities = 20/88 (22%), Positives = 34/88 (38%), Gaps = 6/88 (6%)

Query: 9  SCALEEAQNAALR-NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
            A+E +++A +  +  P+GAV V  +  +    N       +T   E  AI        
Sbjct: 8  ELAIETSKHAYVPYSHFPIGAVLVAKDGNVYTGVNIENVSYPLTNCGERTAIFKAISEGQ 67

Query: 68 QEILPEVDLYVTLE----PCTMCAAAIS 91
          +E   E+ +Y   E    PC  C   + 
Sbjct: 68 RE-FSELIVYGQTEKPISPCGACRQVMV 94


>gi|86134148|ref|ZP_01052730.1| cytidine deaminase [Polaribacter sp. MED152]
 gi|85821011|gb|EAQ42158.1| cytidine deaminase [Polaribacter sp. MED152]
          Length = 160

 Score = 34.5 bits (79), Expect = 5.6,   Method: Composition-based stats.
 Identities = 16/63 (25%), Positives = 25/63 (39%), Gaps = 9/63 (14%)

Query: 2  KKGNVFMSCALEEAQNAALRNEIP-----VGAVAVLNNKIISRAGNRNRELKDVTAHAEI 56
          K+    M  A+E  + A      P     VGA  +L+N ++    N+          AE 
Sbjct: 21 KEDKQLMDKAIEARKKAYA----PYSKFSVGAALLLDNGVVVLGNNQENAAYPSGMCAER 76

Query: 57 LAI 59
          +AI
Sbjct: 77 VAI 79


>gi|259506813|ref|ZP_05749713.1| riboflavin biosynthesis protein RibD [Corynebacterium efficiens
           YS-314]
 gi|259165599|gb|EEW50153.1| riboflavin biosynthesis protein RibD [Corynebacterium efficiens
           YS-314]
          Length = 254

 Score = 34.5 bits (79), Expect = 5.7,   Method: Composition-based stats.
 Identities = 9/41 (21%), Positives = 14/41 (34%), Gaps = 6/41 (14%)

Query: 82  PCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQF 116
           PC        C+ A+  A I R++Y   +P           
Sbjct: 1   PCNHTGRTGPCSQALIDAGIARVFYANPDPFPQAAGGADHL 41


>gi|303322583|ref|XP_003071283.1| Cytidine and deoxycytidylate deaminase zinc-binding domain
           containing protein [Coccidioides posadasii C735 delta
           SOWgp]
 gi|240110985|gb|EER29138.1| Cytidine and deoxycytidylate deaminase zinc-binding domain
           containing protein [Coccidioides posadasii C735 delta
           SOWgp]
 gi|320032991|gb|EFW14941.1| DRAP deaminase [Coccidioides posadasii str. Silveira]
          Length = 232

 Score = 34.1 bits (78), Expect = 5.7,   Method: Composition-based stats.
 Identities = 24/101 (23%), Positives = 34/101 (33%), Gaps = 31/101 (30%)

Query: 33  NNKIISRAGNRNRELKDVTAHAEILAIRMGCRI-----------LSQEILPE----VDLY 77
            +KI+S              HAE   +                 L +E   +    + +Y
Sbjct: 63  EDKILSTGYTLEHRGN---THAEQCCLSKYASHHGVPEEDVGIPLQKERGDDPNAKILMY 119

Query: 78  VTLEPCT-------MCAAAISLAR------IRRLYYGASNP 105
           VT+EPC         CA  I  AR      I R+Y+G   P
Sbjct: 120 VTMEPCGKRLSGNKPCAVRIVEARNHGRAGIDRVYFGVKEP 160


>gi|332525994|ref|ZP_08402134.1| ABC transporter permease [Rubrivivax benzoatilyticus JA2]
 gi|332109839|gb|EGJ10467.1| ABC transporter permease [Rubrivivax benzoatilyticus JA2]
          Length = 288

 Score = 34.1 bits (78), Expect = 5.8,   Method: Composition-based stats.
 Identities = 16/49 (32%), Positives = 18/49 (36%), Gaps = 12/49 (24%)

Query: 7  FMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNREL-KDVTAHA 54
          FM  AL  A  A      P+G + VL          R   L  D  AHA
Sbjct: 13 FMRRAL-VATLALSLGAAPIGCLLVL----------RRMSLAGDALAHA 50


>gi|324963483|gb|ADY62551.1| 1b polyprotein [Infectious bronchitis virus]
          Length = 2676

 Score = 34.1 bits (78), Expect = 5.8,   Method: Composition-based stats.
 Identities = 13/46 (28%), Positives = 18/46 (39%), Gaps = 1/46 (2%)

Query: 99   YYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
             +G       G EN   F  LAT + S  + P I   R    ++ F
Sbjct: 1004 VFGIYRANCAGSENVDDFNQLATTNWST-VEPYILANRCSDSLRRF 1048


>gi|324963472|gb|ADY62541.1| 1b polyprotein [Infectious bronchitis virus]
          Length = 2676

 Score = 34.1 bits (78), Expect = 5.8,   Method: Composition-based stats.
 Identities = 13/46 (28%), Positives = 18/46 (39%), Gaps = 1/46 (2%)

Query: 99   YYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
             +G       G EN   F  LAT + S  + P I   R    ++ F
Sbjct: 1004 VFGIYRANCAGSENVDDFNQLATTNWST-VEPYILANRCSDSLRRF 1048


>gi|262035630|emb|CAZ86697.1| 1ab polyprotein [Infectious bronchitis virus ITA/90254/2005]
          Length = 6631

 Score = 34.1 bits (78), Expect = 5.8,   Method: Composition-based stats.
 Identities = 13/46 (28%), Positives = 18/46 (39%), Gaps = 1/46 (2%)

Query: 99   YYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
             +G       G EN   F  LAT + S  + P I   R    ++ F
Sbjct: 4959 VFGIYRANCAGSENVDDFNQLATTNWST-VEPYILANRCSDSLRRF 5003


>gi|258676516|gb|ACV87266.1| polyprotein 1ab [Turkey coronavirus]
          Length = 6605

 Score = 34.1 bits (78), Expect = 5.8,   Method: Composition-based stats.
 Identities = 13/46 (28%), Positives = 18/46 (39%), Gaps = 1/46 (2%)

Query: 99   YYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
             +G       G EN   F  LAT + S  + P I   R    ++ F
Sbjct: 4958 VFGIYRANCAGSENVDDFNQLATTNWST-VEPYILANRCSDSLRRF 5002


>gi|258676491|gb|ACV87243.1| polyprotein 1a [Turkey coronavirus]
          Length = 6596

 Score = 34.1 bits (78), Expect = 5.8,   Method: Composition-based stats.
 Identities = 13/46 (28%), Positives = 18/46 (39%), Gaps = 1/46 (2%)

Query: 99   YYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
             +G       G EN   F  LAT + S  + P I   R    ++ F
Sbjct: 4952 VFGIYRANCAGSENVDDFNQLATTNWST-VEPYILANRCSDSLRRF 4996


>gi|197724292|gb|ACH72802.1| 1ab polyprotein [Infectious bronchitis virus]
          Length = 6627

 Score = 34.1 bits (78), Expect = 5.8,   Method: Composition-based stats.
 Identities = 13/46 (28%), Positives = 18/46 (39%), Gaps = 1/46 (2%)

Query: 99   YYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
             +G       G EN   F  LAT + S  + P I   R    ++ F
Sbjct: 4955 VFGIYRANCAGSENVDDFNQLATTNWST-VEPYILANRCSDSLRRF 4999


>gi|197724281|gb|ACH72792.1| 1ab polyprotein [Infectious bronchitis virus]
          Length = 6611

 Score = 34.1 bits (78), Expect = 5.8,   Method: Composition-based stats.
 Identities = 13/46 (28%), Positives = 18/46 (39%), Gaps = 1/46 (2%)

Query: 99   YYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
             +G       G EN   F  LAT + S  + P I   R    ++ F
Sbjct: 4939 VFGIYRANCAGSENVDDFNQLATTNWST-VEPYILANRCSDSLRRF 4983


>gi|226201154|gb|ACO37565.1| ORF 1b polyprotein [Infectious bronchitis virus]
          Length = 2652

 Score = 34.1 bits (78), Expect = 5.8,   Method: Composition-based stats.
 Identities = 13/46 (28%), Positives = 18/46 (39%), Gaps = 1/46 (2%)

Query: 99   YYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
             +G       G EN   F  LAT + S  + P I   R    ++ F
Sbjct: 980  VFGIYRANCAGSENVDDFNQLATTNWST-VEPYILANRCSDSLRRF 1024


>gi|194483188|gb|ACF74906.1| pol protein [Infectious bronchitis virus]
          Length = 2652

 Score = 34.1 bits (78), Expect = 5.8,   Method: Composition-based stats.
 Identities = 13/46 (28%), Positives = 18/46 (39%), Gaps = 1/46 (2%)

Query: 99   YYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
             +G       G EN   F  LAT + S  + P I   R    ++ F
Sbjct: 980  VFGIYRANCAGSENVDDFNQLATTNWST-VEPYILANRCSDSLRRF 1024


>gi|158632114|gb|ABW75124.1| polyprotein 1ab [Turkey coronavirus]
          Length = 6623

 Score = 34.1 bits (78), Expect = 5.8,   Method: Composition-based stats.
 Identities = 13/46 (28%), Positives = 18/46 (39%), Gaps = 1/46 (2%)

Query: 99   YYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
             +G       G EN   F  LAT + S  + P I   R    ++ F
Sbjct: 4951 VFGIYRANCAGSENVDDFNQLATTNWST-VEPYILANRCSDSLRRF 4995


>gi|189313891|ref|YP_001941186.1| NSP13 [Turkey coronavirus]
          Length = 600

 Score = 34.1 bits (78), Expect = 5.8,   Method: Composition-based stats.
 Identities = 13/46 (28%), Positives = 18/46 (39%), Gaps = 1/46 (2%)

Query: 99  YYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
            +G       G EN   F  LAT + S  + P I   R    ++ F
Sbjct: 88  VFGIYRANCAGSENVDDFNQLATTNWST-VEPYILANRCSDSLRRF 132


>gi|189313869|ref|YP_001941164.1| ORF1ab polyprotein [Turkey coronavirus]
 gi|169665310|gb|ABW81426.1| ORF1ab polyprotein [Turkey coronavirus]
          Length = 6603

 Score = 34.1 bits (78), Expect = 5.8,   Method: Composition-based stats.
 Identities = 13/46 (28%), Positives = 18/46 (39%), Gaps = 1/46 (2%)

Query: 99   YYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
             +G       G EN   F  LAT + S  + P I   R    ++ F
Sbjct: 4958 VFGIYRANCAGSENVDDFNQLATTNWST-VEPYILANRCSDSLRRF 5002


>gi|186910078|gb|ACC94324.1| 1ab polyprotein [Infectious bronchitis virus]
          Length = 6620

 Score = 34.1 bits (78), Expect = 5.8,   Method: Composition-based stats.
 Identities = 13/46 (28%), Positives = 18/46 (39%), Gaps = 1/46 (2%)

Query: 99   YYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
             +G       G EN   F  LAT + S  + P I   R    ++ F
Sbjct: 4948 VFGIYRANCAGSENVDDFNQLATTNWST-VEPYILANRCSDSLRRF 4992


>gi|160937911|ref|ZP_02085269.1| hypothetical protein CLOBOL_02805 [Clostridium bolteae ATCC
           BAA-613]
 gi|158439137|gb|EDP16891.1| hypothetical protein CLOBOL_02805 [Clostridium bolteae ATCC
           BAA-613]
          Length = 262

 Score = 34.1 bits (78), Expect = 5.8,   Method: Composition-based stats.
 Identities = 7/20 (35%), Positives = 11/20 (55%)

Query: 126 PEIYPGISEQRSRQIIQDFF 145
            E+  GI E+  R++   FF
Sbjct: 15  IEVTEGILEEECRELNHVFF 34


>gi|164661001|ref|XP_001731623.1| hypothetical protein MGL_0891 [Malassezia globosa CBS 7966]
 gi|159105524|gb|EDP44409.1| hypothetical protein MGL_0891 [Malassezia globosa CBS 7966]
          Length = 338

 Score = 34.1 bits (78), Expect = 5.9,   Method: Composition-based stats.
 Identities = 10/31 (32%), Positives = 16/31 (51%), Gaps = 2/31 (6%)

Query: 77  YVTLEPCTMCAAAISLARIRRLYYGASNPKG 107
           Y    PC  C   +  A I+R+Y+  ++P G
Sbjct: 254 YADSRPCWRCLEWMYWAGIKRVYW--TDPDG 282


>gi|239814028|ref|YP_002942938.1| cobalt-precorrin-6A synthase [Variovorax paradoxus S110]
 gi|259585587|sp|C5CPF1|CBID_VARPS RecName: Full=Putative cobalt-precorrin-6A synthase [deacetylating]
 gi|239800605|gb|ACS17672.1| cobalamin biosynthesis protein CbiD [Variovorax paradoxus S110]
          Length = 365

 Score = 34.1 bits (78), Expect = 6.0,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 19/57 (33%), Gaps = 8/57 (14%)

Query: 86  CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHH--SPEIYPGISEQRSRQI 140
              A   A IR++  G      G +   T+     T  H    E+  G+    +  +
Sbjct: 245 AMGAAVKAGIRKVVIG------GMVGKLTKIAQGETITHAGRAEVDTGLLADLAAGL 295


>gi|206969950|ref|ZP_03230904.1| conserved hypothetical protein [Bacillus cereus AH1134]
 gi|206735638|gb|EDZ52806.1| conserved hypothetical protein [Bacillus cereus AH1134]
          Length = 169

 Score = 34.1 bits (78), Expect = 6.0,   Method: Composition-based stats.
 Identities = 7/25 (28%), Positives = 10/25 (40%)

Query: 3  KGNVFMSCALEEAQNAALRNEIPVG 27
               M  A+  A+ A    E P+G
Sbjct: 40 SDEETMQGAINRAKRALEEGEAPIG 64


>gi|282598594|gb|ADA83566.1| replicase polyprotein 1ab [Infectious bronchitis virus]
          Length = 6629

 Score = 34.1 bits (78), Expect = 6.2,   Method: Composition-based stats.
 Identities = 13/46 (28%), Positives = 18/46 (39%), Gaps = 1/46 (2%)

Query: 99   YYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
             +G       G EN   F  LAT + S  + P I   R    ++ F
Sbjct: 4957 VFGIYRANCAGSENVDDFNQLATTNWSI-VEPYILANRCSDSLRRF 5001


>gi|62996641|gb|AAY24432.1| polyprotein 1b [Infectious bronchitis virus]
          Length = 2652

 Score = 34.1 bits (78), Expect = 6.2,   Method: Composition-based stats.
 Identities = 13/46 (28%), Positives = 18/46 (39%), Gaps = 1/46 (2%)

Query: 99   YYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
             +G       G EN   F  LAT + S  + P I   R    ++ F
Sbjct: 980  VFGIYRANCAGSENVDDFNQLATTNWSI-VEPYILANRCSDSLRRF 1024


>gi|62996630|gb|AAY24422.1| polyprotein 1b [Infectious bronchitis virus]
          Length = 2652

 Score = 34.1 bits (78), Expect = 6.2,   Method: Composition-based stats.
 Identities = 13/46 (28%), Positives = 18/46 (39%), Gaps = 1/46 (2%)

Query: 99   YYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
             +G       G EN   F  LAT + S  + P I   R    ++ F
Sbjct: 980  VFGIYRANCAGSENVDDFNQLATTNWSI-VEPYILANRCSDSLRRF 1024


>gi|56555214|gb|AAV98205.1| polyprotein 1b [Infectious bronchitis virus]
          Length = 2652

 Score = 34.1 bits (78), Expect = 6.2,   Method: Composition-based stats.
 Identities = 13/46 (28%), Positives = 18/46 (39%), Gaps = 1/46 (2%)

Query: 99   YYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
             +G       G EN   F  LAT + S  + P I   R    ++ F
Sbjct: 980  VFGIYRANCAGSENVDDFNQLATTNWSI-VEPYILANRCSDSLRRF 1024


>gi|292953|gb|AAA70234.1| pol protein [Infectious bronchitis virus]
 gi|331173|gb|AAA46224.1| ORF1b [Infectious bronchitis virus]
          Length = 2652

 Score = 34.1 bits (78), Expect = 6.2,   Method: Composition-based stats.
 Identities = 13/46 (28%), Positives = 18/46 (39%), Gaps = 1/46 (2%)

Query: 99   YYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
             +G       G EN   F  LAT + S  + P I   R    ++ F
Sbjct: 980  VFGIYRANCAGSENVDDFNQLATTNWSI-VEPYILANRCSDSLRRF 1024


>gi|25121554|ref|NP_740630.1| coronavirus nsp10 [Infectious bronchitis virus]
          Length = 600

 Score = 34.1 bits (78), Expect = 6.2,   Method: Composition-based stats.
 Identities = 13/46 (28%), Positives = 18/46 (39%), Gaps = 1/46 (2%)

Query: 99  YYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
            +G       G EN   F  LAT + S  + P I   R    ++ F
Sbjct: 89  VFGIYRANCAGSENVDDFNQLATTNWSI-VEPYILANRCSDSLRRF 133


>gi|190360120|sp|P0C6Y2|R1AB_IBVBC RecName: Full=Replicase polyprotein 1ab; Short=pp1ab; AltName:
            Full=ORF1ab polyprotein; Contains: RecName:
            Full=Non-structural protein 2; Short=nsp2; AltName:
            Full=p87; Contains: RecName: Full=Non-structural protein
            3; Short=nsp3; AltName: Full=Papain-like proteinase;
            Short=PL-PRO; AltName: Full=p195; Contains: RecName:
            Full=Non-structural protein 4; Short=nsp4; AltName:
            Full=Peptide HD2; AltName: Full=p41; Contains: RecName:
            Full=3C-like proteinase; Short=3CL-PRO; Short=3CLp;
            AltName: Full=M-PRO; AltName: Full=nsp5; AltName:
            Full=p33; Contains: RecName: Full=Non-structural protein
            6; Short=nsp6; AltName: Full=p34; Contains: RecName:
            Full=Non-structural protein 7; Short=nsp7; AltName:
            Full=p9; Contains: RecName: Full=Non-structural protein
            8; Short=nsp8; AltName: Full=p24; Contains: RecName:
            Full=Non-structural protein 9; Short=nsp9; AltName:
            Full=p10; Contains: RecName: Full=Non-structural protein
            10; Short=nsp10; AltName: Full=Growth factor-like
            peptide; Short=GFL; AltName: Full=p16; Contains: RecName:
            Full=RNA-directed RNA polymerase; Short=Pol; Short=RdRp;
            AltName: Full=nsp12; AltName: Full=p100; Contains:
            RecName: Full=Helicase; Short=Hel; AltName: Full=nsp13;
            AltName: Full=p68; Contains: RecName:
            Full=Exoribonuclease; Short=ExoN; AltName: Full=nsp14;
            AltName: Full=p58; Contains: RecName:
            Full=Uridylate-specific endoribonuclease; AltName:
            Full=NendoU; AltName: Full=nsp15; AltName: Full=p39;
            Contains: RecName: Full=Putative 2'-O-methyl transferase;
            AltName: Full=nsp16; AltName: Full=p35
          Length = 6629

 Score = 34.1 bits (78), Expect = 6.2,   Method: Composition-based stats.
 Identities = 13/46 (28%), Positives = 18/46 (39%), Gaps = 1/46 (2%)

Query: 99   YYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
             +G       G EN   F  LAT + S  + P I   R    ++ F
Sbjct: 4957 VFGIYRANCAGSENVDDFNQLATTNWSI-VEPYILANRCSDSLRRF 5001


>gi|14149033|emb|CAC39112.1| replicase polyprotein 1ab [Avian infectious bronchitis virus (strain
            Beaudette CK)]
          Length = 6629

 Score = 34.1 bits (78), Expect = 6.2,   Method: Composition-based stats.
 Identities = 13/46 (28%), Positives = 18/46 (39%), Gaps = 1/46 (2%)

Query: 99   YYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
             +G       G EN   F  LAT + S  + P I   R    ++ F
Sbjct: 4957 VFGIYRANCAGSENVDDFNQLATTNWSI-VEPYILANRCSDSLRRF 5001


>gi|10242469|ref|NP_066134.1| ORF1ab polyprotein [Infectious bronchitis virus]
 gi|190360119|sp|P0C6Y1|R1AB_IBVB RecName: Full=Replicase polyprotein 1ab; Short=pp1ab; AltName:
            Full=ORF1ab polyprotein; Contains: RecName:
            Full=Non-structural protein 2; Short=nsp2; AltName:
            Full=p87; Contains: RecName: Full=Non-structural protein
            3; Short=nsp3; AltName: Full=Papain-like proteinase;
            Short=PL-PRO; AltName: Full=p195; Contains: RecName:
            Full=Non-structural protein 4; Short=nsp4; AltName:
            Full=Peptide HD2; AltName: Full=p41; Contains: RecName:
            Full=3C-like proteinase; Short=3CL-PRO; Short=3CLp;
            AltName: Full=M-PRO; AltName: Full=nsp5; AltName:
            Full=p33; Contains: RecName: Full=Non-structural protein
            6; Short=nsp6; AltName: Full=p34; Contains: RecName:
            Full=Non-structural protein 7; Short=nsp7; AltName:
            Full=p9; Contains: RecName: Full=Non-structural protein
            8; Short=nsp8; AltName: Full=p24; Contains: RecName:
            Full=Non-structural protein 9; Short=nsp9; AltName:
            Full=p10; Contains: RecName: Full=Non-structural protein
            10; Short=nsp10; AltName: Full=Growth factor-like
            peptide; Short=GFL; AltName: Full=p16; Contains: RecName:
            Full=RNA-directed RNA polymerase; Short=Pol; Short=RdRp;
            AltName: Full=nsp12; AltName: Full=p100; Contains:
            RecName: Full=Helicase; Short=Hel; AltName: Full=nsp13;
            AltName: Full=p68; Contains: RecName:
            Full=Exoribonuclease; Short=ExoN; AltName: Full=nsp14;
            AltName: Full=p58; Contains: RecName:
            Full=Uridylate-specific endoribonuclease; AltName:
            Full=NendoU; AltName: Full=nsp15; AltName: Full=p39;
            Contains: RecName: Full=Putative 2'-O-methyl transferase;
            AltName: Full=nsp16; AltName: Full=p35
          Length = 6629

 Score = 34.1 bits (78), Expect = 6.2,   Method: Composition-based stats.
 Identities = 13/46 (28%), Positives = 18/46 (39%), Gaps = 1/46 (2%)

Query: 99   YYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
             +G       G EN   F  LAT + S  + P I   R    ++ F
Sbjct: 4957 VFGIYRANCAGSENVDDFNQLATTNWSI-VEPYILANRCSDSLRRF 5001


>gi|229181013|ref|ZP_04308348.1| hypothetical protein bcere0005_43570 [Bacillus cereus 172560W]
 gi|228602570|gb|EEK60056.1| hypothetical protein bcere0005_43570 [Bacillus cereus 172560W]
          Length = 172

 Score = 34.1 bits (78), Expect = 6.3,   Method: Composition-based stats.
 Identities = 7/25 (28%), Positives = 10/25 (40%)

Query: 3  KGNVFMSCALEEAQNAALRNEIPVG 27
               M  A+  A+ A    E P+G
Sbjct: 43 SDEETMQGAINRAKRALEEGEAPIG 67


>gi|218899852|ref|YP_002448263.1| hypothetical protein BCG9842_B0429 [Bacillus cereus G9842]
 gi|218544451|gb|ACK96845.1| conserved hypothetical protein [Bacillus cereus G9842]
          Length = 169

 Score = 34.1 bits (78), Expect = 6.3,   Method: Composition-based stats.
 Identities = 7/25 (28%), Positives = 10/25 (40%)

Query: 3  KGNVFMSCALEEAQNAALRNEIPVG 27
               M  A+  A+ A    E P+G
Sbjct: 40 SDEETMQGAINRAKRALEEGEAPIG 64


>gi|322378873|ref|ZP_08053290.1| DNA topoisomerase I [Helicobacter suis HS1]
 gi|321148683|gb|EFX43166.1| DNA topoisomerase I [Helicobacter suis HS1]
          Length = 763

 Score = 34.1 bits (78), Expect = 6.4,   Method: Composition-based stats.
 Identities = 8/27 (29%), Positives = 14/27 (51%), Gaps = 1/27 (3%)

Query: 79  TLEPCTMCAAAISLARIRR-LYYGASN 104
           +  PC  C   +   R +R ++YG +N
Sbjct: 688 SAYPCPQCQGQVVQKRSKRGVFYGCNN 714


>gi|15900731|ref|NP_345335.1| cytidine deaminase [Streptococcus pneumoniae TIGR4]
 gi|15902790|ref|NP_358340.1| cytidine deaminase [Streptococcus pneumoniae R6]
 gi|111657485|ref|ZP_01408231.1| hypothetical protein SpneT_02001310 [Streptococcus pneumoniae
          TIGR4]
 gi|116516117|ref|YP_816230.1| cytidine deaminase [Streptococcus pneumoniae D39]
 gi|149004049|ref|ZP_01828855.1| cytidine deaminase [Streptococcus pneumoniae SP14-BS69]
 gi|149007216|ref|ZP_01830880.1| cytidine deaminase [Streptococcus pneumoniae SP18-BS74]
 gi|168485790|ref|ZP_02710298.1| cytidine deaminase [Streptococcus pneumoniae CDC1087-00]
 gi|168492997|ref|ZP_02717140.1| cytidine deaminase [Streptococcus pneumoniae CDC3059-06]
 gi|237650834|ref|ZP_04525086.1| cytidine deaminase [Streptococcus pneumoniae CCRI 1974]
 gi|237821561|ref|ZP_04597406.1| cytidine deaminase [Streptococcus pneumoniae CCRI 1974M2]
 gi|14972318|gb|AAK74975.1| cytidine deaminase [Streptococcus pneumoniae TIGR4]
 gi|15458339|gb|AAK99550.1| Cytidine deaminase [Streptococcus pneumoniae R6]
 gi|116076693|gb|ABJ54413.1| cytidine deaminase [Streptococcus pneumoniae D39]
 gi|147757950|gb|EDK64958.1| cytidine deaminase [Streptococcus pneumoniae SP14-BS69]
 gi|147761254|gb|EDK68221.1| cytidine deaminase [Streptococcus pneumoniae SP18-BS74]
 gi|183570966|gb|EDT91494.1| cytidine deaminase [Streptococcus pneumoniae CDC1087-00]
 gi|183576910|gb|EDT97438.1| cytidine deaminase [Streptococcus pneumoniae CDC3059-06]
 gi|301793984|emb|CBW36382.1| cytidine deaminase [Streptococcus pneumoniae INV104]
 gi|332076122|gb|EGI86588.1| cytidine deaminase [Streptococcus pneumoniae GA41301]
 gi|332202698|gb|EGJ16767.1| cytidine deaminase [Streptococcus pneumoniae GA41317]
          Length = 129

 Score = 34.1 bits (78), Expect = 6.4,   Method: Composition-based stats.
 Identities = 20/83 (24%), Positives = 33/83 (39%), Gaps = 6/83 (7%)

Query: 9  SCALEEAQNAALR-NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
            A+E +++A +  +  P+GAV V  +  +    N       +T   E  AI        
Sbjct: 8  ELAIETSKHAYVPYSHFPIGAVLVAKDGSVYTGVNIENASYPLTNCGERTAIFKAISEGQ 67

Query: 68 QEILPEVDLYVTLE----PCTMC 86
          +E   E+ +Y   E    PC  C
Sbjct: 68 RE-FSELIVYGQTEKPISPCGAC 89


>gi|296505163|ref|YP_003666863.1| NTPase [Bacillus thuringiensis BMB171]
 gi|296326215|gb|ADH09143.1| NTPase [Bacillus thuringiensis BMB171]
          Length = 169

 Score = 34.1 bits (78), Expect = 6.5,   Method: Composition-based stats.
 Identities = 7/25 (28%), Positives = 10/25 (40%)

Query: 3  KGNVFMSCALEEAQNAALRNEIPVG 27
               M  A+  A+ A    E P+G
Sbjct: 40 SDEETMQGAINRAKRALEEGEAPIG 64


>gi|75761589|ref|ZP_00741543.1| Hypothetical protein RBTH_05282 [Bacillus thuringiensis serovar
          israelensis ATCC 35646]
 gi|74490914|gb|EAO54176.1| Hypothetical protein RBTH_05282 [Bacillus thuringiensis serovar
          israelensis ATCC 35646]
          Length = 172

 Score = 34.1 bits (78), Expect = 6.5,   Method: Composition-based stats.
 Identities = 7/25 (28%), Positives = 10/25 (40%)

Query: 3  KGNVFMSCALEEAQNAALRNEIPVG 27
               M  A+  A+ A    E P+G
Sbjct: 43 SDEETMQGAINRAKRALEEGEAPIG 67


>gi|326942481|gb|AEA18377.1| NTPase [Bacillus thuringiensis serovar chinensis CT-43]
          Length = 169

 Score = 34.1 bits (78), Expect = 6.7,   Method: Composition-based stats.
 Identities = 7/25 (28%), Positives = 10/25 (40%)

Query: 3  KGNVFMSCALEEAQNAALRNEIPVG 27
               M  A+  A+ A    E P+G
Sbjct: 40 SDEETMQGAINRAKRALEEGEAPIG 64


>gi|228903216|ref|ZP_04067349.1| hypothetical protein bthur0014_43810 [Bacillus thuringiensis IBL
          4222]
 gi|228856390|gb|EEN00917.1| hypothetical protein bthur0014_43810 [Bacillus thuringiensis IBL
          4222]
          Length = 176

 Score = 34.1 bits (78), Expect = 6.7,   Method: Composition-based stats.
 Identities = 7/25 (28%), Positives = 10/25 (40%)

Query: 3  KGNVFMSCALEEAQNAALRNEIPVG 27
               M  A+  A+ A    E P+G
Sbjct: 47 SDEETMQGAINRAKRALEEGEAPIG 71


>gi|302525075|ref|ZP_07277417.1| 4-hydroxyphenylacetate degradation bifunctional
          isomerase/decarboxylase [Streptomyces sp. AA4]
 gi|302433970|gb|EFL05786.1| 4-hydroxyphenylacetate degradation bifunctional
          isomerase/decarboxylase [Streptomyces sp. AA4]
          Length = 284

 Score = 34.1 bits (78), Expect = 6.8,   Method: Composition-based stats.
 Identities = 13/49 (26%), Positives = 15/49 (30%), Gaps = 15/49 (30%)

Query: 15 AQNAALRNEIPV--------GAVAVLNNKIISRAGNRNRELKDVTAHAE 55
          A  A    E+PV        GA      KI+    N          HAE
Sbjct: 46 AARALEAGELPVADGAGLRVGAPIAAPGKIVCIGMNYR-------RHAE 87


>gi|228960969|ref|ZP_04122599.1| hypothetical protein bthur0005_44220 [Bacillus thuringiensis
          serovar pakistani str. T13001]
 gi|229048404|ref|ZP_04193971.1| hypothetical protein bcere0027_43710 [Bacillus cereus AH676]
 gi|229112159|ref|ZP_04241701.1| hypothetical protein bcere0018_44020 [Bacillus cereus Rock1-15]
 gi|229129976|ref|ZP_04258940.1| hypothetical protein bcere0015_44160 [Bacillus cereus BDRD-Cer4]
 gi|229147265|ref|ZP_04275617.1| hypothetical protein bcere0012_43970 [Bacillus cereus BDRD-ST24]
 gi|229152896|ref|ZP_04281078.1| hypothetical protein bcere0011_44280 [Bacillus cereus m1550]
 gi|228630509|gb|EEK87156.1| hypothetical protein bcere0011_44280 [Bacillus cereus m1550]
 gi|228636202|gb|EEK92680.1| hypothetical protein bcere0012_43970 [Bacillus cereus BDRD-ST24]
 gi|228653420|gb|EEL09294.1| hypothetical protein bcere0015_44160 [Bacillus cereus BDRD-Cer4]
 gi|228671275|gb|EEL26577.1| hypothetical protein bcere0018_44020 [Bacillus cereus Rock1-15]
 gi|228722919|gb|EEL74297.1| hypothetical protein bcere0027_43710 [Bacillus cereus AH676]
 gi|228798686|gb|EEM45669.1| hypothetical protein bthur0005_44220 [Bacillus thuringiensis
          serovar pakistani str. T13001]
          Length = 172

 Score = 34.1 bits (78), Expect = 6.8,   Method: Composition-based stats.
 Identities = 7/25 (28%), Positives = 10/25 (40%)

Query: 3  KGNVFMSCALEEAQNAALRNEIPVG 27
               M  A+  A+ A    E P+G
Sbjct: 43 SDEETMQGAINRAKRALEEGEAPIG 67


>gi|458735|emb|CAA83018.1| potential chimeric protein [Infectious bronchitis virus]
          Length = 2155

 Score = 34.1 bits (78), Expect = 6.8,   Method: Composition-based stats.
 Identities = 13/46 (28%), Positives = 18/46 (39%), Gaps = 1/46 (2%)

Query: 99   YYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
             +G       G EN   F  LAT + S  + P I   R    ++ F
Sbjct: 1038 VFGIYRANCAGSENVDDFNQLATTNWSI-VEPYILANRCSDSLRRF 1082


>gi|228941879|ref|ZP_04104424.1| hypothetical protein bthur0008_45150 [Bacillus thuringiensis
          serovar berliner ATCC 10792]
 gi|228974806|ref|ZP_04135370.1| hypothetical protein bthur0003_45580 [Bacillus thuringiensis
          serovar thuringiensis str. T01001]
 gi|228981398|ref|ZP_04141698.1| hypothetical protein bthur0002_45590 [Bacillus thuringiensis
          Bt407]
 gi|228778598|gb|EEM26865.1| hypothetical protein bthur0002_45590 [Bacillus thuringiensis
          Bt407]
 gi|228784904|gb|EEM32919.1| hypothetical protein bthur0003_45580 [Bacillus thuringiensis
          serovar thuringiensis str. T01001]
 gi|228817784|gb|EEM63864.1| hypothetical protein bthur0008_45150 [Bacillus thuringiensis
          serovar berliner ATCC 10792]
          Length = 172

 Score = 34.1 bits (78), Expect = 6.9,   Method: Composition-based stats.
 Identities = 7/25 (28%), Positives = 10/25 (40%)

Query: 3  KGNVFMSCALEEAQNAALRNEIPVG 27
               M  A+  A+ A    E P+G
Sbjct: 43 SDEETMQGAINRAKRALEEGEAPIG 67


>gi|189188060|ref|XP_001930369.1| tRNA-specific adenosine deaminase [Pyrenophora tritici-repentis
          Pt-1C-BFP]
 gi|187971975|gb|EDU39474.1| tRNA-specific adenosine deaminase [Pyrenophora tritici-repentis
          Pt-1C-BFP]
          Length = 359

 Score = 34.1 bits (78), Expect = 7.0,   Method: Composition-based stats.
 Identities = 16/42 (38%), Positives = 18/42 (42%), Gaps = 7/42 (16%)

Query: 45 RELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMC 86
            L D   HAEI+AIR   R L    L E  L  T  P  + 
Sbjct: 15 NILHD--WHAEIVAIRAFNRYL----LDECILISTP-PYPIS 49


>gi|163754144|ref|ZP_02161267.1| cytidine deaminase [Kordia algicida OT-1]
 gi|161326358|gb|EDP97684.1| cytidine deaminase [Kordia algicida OT-1]
          Length = 160

 Score = 34.1 bits (78), Expect = 7.0,   Method: Composition-based stats.
 Identities = 21/104 (20%), Positives = 36/104 (34%), Gaps = 20/104 (19%)

Query: 8   MSCALEEAQNAALRNEIP-----VGAVAVLNNKIISRAGNRNRELKDVTAH-AEILAIRM 61
           M  A+E  + A      P     VGA   L N ++    N+       +   AE +AI  
Sbjct: 27  MQHAVEARKKAYA----PYSKFKVGAALFLENGVVVTGSNQENAAY-PSGLCAERVAIFH 81

Query: 62  GCRILSQEILPEVDLYVTLE---------PCTMCAAAISLARIR 96
                    + ++ +  T +         PC  C  +I+   +R
Sbjct: 82  AGAQYPNVKIQQIAITATSDNHINKTPIPPCGACRQSIAEYEMR 125


>gi|223932346|ref|ZP_03624349.1| cytidine deaminase [Streptococcus suis 89/1591]
 gi|302023862|ref|ZP_07249073.1| cytidine deaminase [Streptococcus suis 05HAS68]
 gi|330832904|ref|YP_004401729.1| cytidine deaminase [Streptococcus suis ST3]
 gi|223899027|gb|EEF65385.1| cytidine deaminase [Streptococcus suis 89/1591]
 gi|329307127|gb|AEB81543.1| cytidine deaminase [Streptococcus suis ST3]
          Length = 129

 Score = 34.1 bits (78), Expect = 7.1,   Method: Composition-based stats.
 Identities = 18/66 (27%), Positives = 22/66 (33%), Gaps = 5/66 (7%)

Query: 25 PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE--- 81
          PV AV V     I    N       +T  AE  AI         +   E+ +Y   E   
Sbjct: 25 PVSAVLVAETGEIFTGVNIENASFGLTNCAERTAIFKAISE-GVKDFSEIVIYGKTEKPI 83

Query: 82 -PCTMC 86
           PC  C
Sbjct: 84 SPCGAC 89


>gi|307708539|ref|ZP_07645004.1| cytidine deaminase [Streptococcus mitis NCTC 12261]
 gi|307615455|gb|EFN94663.1| cytidine deaminase [Streptococcus mitis NCTC 12261]
          Length = 129

 Score = 34.1 bits (78), Expect = 7.3,   Method: Composition-based stats.
 Identities = 20/83 (24%), Positives = 31/83 (37%), Gaps = 6/83 (7%)

Query: 9  SCALEEAQNAALR-NEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILS 67
            A+E ++ A +  +  P+GAV V  +       N       +T   E  AI        
Sbjct: 8  ELAIETSKKAYVPYSHFPIGAVLVAKDGSSYTGVNIENASYSLTNCGERTAIFKAVSEGQ 67

Query: 68 QEILPEVDLYVTLE----PCTMC 86
          +E   E+ +Y   E    PC  C
Sbjct: 68 RE-FSELIVYGQTEKPISPCGAC 89


>gi|30022767|ref|NP_834398.1| NTPase [Bacillus cereus ATCC 14579]
 gi|29898326|gb|AAP11599.1| hypothetical protein BC_4692 [Bacillus cereus ATCC 14579]
          Length = 154

 Score = 34.1 bits (78), Expect = 7.3,   Method: Composition-based stats.
 Identities = 7/25 (28%), Positives = 10/25 (40%)

Query: 3  KGNVFMSCALEEAQNAALRNEIPVG 27
               M  A+  A+ A    E P+G
Sbjct: 25 SDEETMQGAINRAKRALEEGEAPIG 49


>gi|328478593|gb|EGF48260.1| hypothetical protein AAULR_18341 [Lactobacillus rhamnosus MTCC
           5462]
          Length = 55

 Score = 34.1 bits (78), Expect = 7.3,   Method: Composition-based stats.
 Identities = 8/23 (34%), Positives = 12/23 (52%)

Query: 122 CHHSPEIYPGISEQRSRQIIQDF 144
            +H   + PGI    S  ++QDF
Sbjct: 1   FNHQVAVVPGIQATASAALLQDF 23


>gi|330922088|ref|XP_003299690.1| hypothetical protein PTT_10741 [Pyrenophora teres f. teres 0-1]
 gi|311326515|gb|EFQ92202.1| hypothetical protein PTT_10741 [Pyrenophora teres f. teres 0-1]
          Length = 359

 Score = 34.1 bits (78), Expect = 7.4,   Method: Composition-based stats.
 Identities = 15/42 (35%), Positives = 18/42 (42%), Gaps = 7/42 (16%)

Query: 45 RELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMC 86
            L D   HAE++AIR   R L    L E  L  T  P  + 
Sbjct: 15 NILHD--WHAEVVAIRAFNRYL----LDECILISTS-PYPVS 49


>gi|58264484|ref|XP_569398.1| hypothetical protein CNC00250 [Cryptococcus neoformans var.
            neoformans JEC21]
 gi|134110197|ref|XP_776309.1| hypothetical protein CNBC6980 [Cryptococcus neoformans var.
            neoformans B-3501A]
 gi|50258981|gb|EAL21662.1| hypothetical protein CNBC6980 [Cryptococcus neoformans var.
            neoformans B-3501A]
 gi|57225630|gb|AAW42091.1| hypothetical protein CNC00250 [Cryptococcus neoformans var.
            neoformans JEC21]
          Length = 1860

 Score = 33.7 bits (77), Expect = 7.5,   Method: Composition-based stats.
 Identities = 12/56 (21%), Positives = 20/56 (35%), Gaps = 7/56 (12%)

Query: 71   LPEVDLYVTLEPC-------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTL 119
            L +   + T+EPC         CA  +  A ++ +Y G   P       G +    
Sbjct: 1781 LKDAICFATMEPCSYRTSGGPSCALELVRAGVKAVYLGVEEPPDFVECEGVRILQD 1836


>gi|319948957|ref|ZP_08023062.1| riboflavin biosynthesis protein RibD [Dietzia cinnamea P4]
 gi|319437395|gb|EFV92410.1| riboflavin biosynthesis protein RibD [Dietzia cinnamea P4]
          Length = 288

 Score = 33.7 bits (77), Expect = 7.7,   Method: Composition-based stats.
 Identities = 12/45 (26%), Positives = 16/45 (35%), Gaps = 6/45 (13%)

Query: 78  VTLEPCTM------CAAAISLARIRRLYYGASNPKGGGIENGTQF 116
           +TLEPC        C A    A + R+ Y  S+P           
Sbjct: 1   MTLEPCDHHGRTGPCTARALAAGVARVVYAVSDPNPVAAGGADTL 45


>gi|50082762|gb|AAT70073.1| replicase polyprotein 1ab [Infectious bronchitis virus]
          Length = 6610

 Score = 33.7 bits (77), Expect = 8.2,   Method: Composition-based stats.
 Identities = 13/46 (28%), Positives = 18/46 (39%), Gaps = 1/46 (2%)

Query: 99   YYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDF 144
             +G       G EN   F  LAT + S  + P I   R    ++ F
Sbjct: 4938 VFGIYRANCAGSENVDDFNQLATTNWST-VEPYILASRCSDSLRRF 4982


>gi|16800568|ref|NP_470836.1| hypothetical protein lin1500 [Listeria innocua Clip11262]
 gi|16413973|emb|CAC96731.1| lin1500 [Listeria innocua Clip11262]
 gi|313618894|gb|EFR90759.1| cytidine deaminase [Listeria innocua FSL S4-378]
 gi|313623744|gb|EFR93886.1| cytidine deaminase [Listeria innocua FSL J1-023]
          Length = 131

 Score = 33.7 bits (77), Expect = 8.6,   Method: Composition-based stats.
 Identities = 21/100 (21%), Positives = 35/100 (35%), Gaps = 17/100 (17%)

Query: 1  MKKGNVFMSCALEEAQNAALRNEIP-----VGAVAV-LNNKIISRAGNRNRELKDVTAHA 54
          MK+ N      +  A+ A     +P     VGA  V  +++++    N       +T  A
Sbjct: 1  MKENNF-----ISLAKQAREFAYVPYSKFPVGAALVTKDDEVVL-GCNIENASFGLTNCA 54

Query: 55 EILAIRMGCRILSQEILPEVDLYVTLE----PCTMCAAAI 90
          E  AI        +    ++ +    E    PC  C   I
Sbjct: 55 ERTAIFKAVSE-GKRDFKQLVVVADTEGPVSPCGACRQVI 93


>gi|332291221|ref|YP_004429830.1| CMP/dCMP deaminase zinc-binding protein [Krokinobacter diaphorus
           4H-3-7-5]
 gi|332169307|gb|AEE18562.1| CMP/dCMP deaminase zinc-binding protein [Krokinobacter diaphorus
           4H-3-7-5]
          Length = 160

 Score = 33.7 bits (77), Expect = 8.8,   Method: Composition-based stats.
 Identities = 22/103 (21%), Positives = 34/103 (33%), Gaps = 18/103 (17%)

Query: 8   MSCALEEAQNAALRNEIP-----VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMG 62
           M  A E  + A      P     VGA  +L+N ++    N+          AE  AI   
Sbjct: 27  MDAAFEAREKAYA----PYSDFLVGAALLLDNGVVVTGNNQENACYPGGLCAERTAIFYA 82

Query: 63  CRILS---------QEILPEVDLYVTLEPCTMCAAAISLARIR 96
                              + +  V + PC +C  AI+   I+
Sbjct: 83  SSQYPDAVMVSMAITARAKDKETTVPIPPCGICRQAIAEYEIK 125


>gi|315303201|ref|ZP_07873858.1| cytidine deaminase [Listeria ivanovii FSL F6-596]
 gi|313628428|gb|EFR96904.1| cytidine deaminase [Listeria ivanovii FSL F6-596]
          Length = 135

 Score = 33.3 bits (76), Expect = 9.8,   Method: Composition-based stats.
 Identities = 23/100 (23%), Positives = 35/100 (35%), Gaps = 17/100 (17%)

Query: 1  MKKGNVFMSCALEEAQNAALRN-----EIPVGAVAV-LNNKIISRAGNRNRELKDVTAHA 54
          MK+ N      +  A+ A         E PVGA  V  ++++I    N       +T  A
Sbjct: 5  MKESNF-----ISLAKQAREFAYVPYSEFPVGAALVTTDDEVIL-GCNIENASFGLTNCA 58

Query: 55 EILAIRMGCRILSQEILPEVDLYVTLE----PCTMCAAAI 90
          E  AI        +    ++ +    E    PC  C   I
Sbjct: 59 ERTAIFKAVSE-GKRDFKQLVVVADTEGPVSPCGACRQVI 97


>gi|310696847|gb|ADP06472.1| polyprotein 1ab [Infectious bronchitis virus]
          Length = 6621

 Score = 33.3 bits (76), Expect = 9.8,   Method: Composition-based stats.
 Identities = 29/147 (19%), Positives = 45/147 (30%), Gaps = 45/147 (30%)

Query: 27   GAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM---GCRILSQEIL-PEVDLYVTLEP 82
            G   V N++ I R GN                IR     C+     ++  +    +++ P
Sbjct: 4863 GVCVVCNSQTILRCGN---------------CIRKPFLCCKCCYDHVMHTDHKNVLSINP 4907

Query: 83   CTMCAAAISLARIRRLY-----YGASNPK-------------GG-------GIENGTQFY 117
                      A + +LY     Y   N K              G       G E+   F 
Sbjct: 4908 YICSQPGCGEADVTKLYLGGMSYFCGNHKPKLSIPLVSNGTVFGIYRANCVGSESVDDFN 4967

Query: 118  TLATCHHSPEIYPGISEQRSRQIIQDF 144
             LAT + S  + P I   R    ++ F
Sbjct: 4968 QLATTNWST-VEPYILANRCSDSLRRF 4993


>gi|310696834|gb|ADP06460.1| polyprotein 1ab [Infectious bronchitis virus]
          Length = 6620

 Score = 33.3 bits (76), Expect = 9.8,   Method: Composition-based stats.
 Identities = 29/147 (19%), Positives = 45/147 (30%), Gaps = 45/147 (30%)

Query: 27   GAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRM---GCRILSQEIL-PEVDLYVTLEP 82
            G   V N++ I R GN                IR     C+     ++  +    +++ P
Sbjct: 4862 GVCVVCNSQTILRCGN---------------CIRKPFLCCKCCYDHVMHTDHKNVLSINP 4906

Query: 83   CTMCAAAISLARIRRLY-----YGASNPK-------------GG-------GIENGTQFY 117
                      A + +LY     Y   N K              G       G E+   F 
Sbjct: 4907 YICSQPGCGEADVTKLYLGGMSYFCGNHKPKLSIPLVSNGTVFGIYRANCVGSESVDDFN 4966

Query: 118  TLATCHHSPEIYPGISEQRSRQIIQDF 144
             LAT + S  + P I   R    ++ F
Sbjct: 4967 QLATTNWST-VEPYILANRCSDSLRRF 4992


>gi|126662324|ref|ZP_01733323.1| cytidine deaminase [Flavobacteria bacterium BAL38]
 gi|126625703|gb|EAZ96392.1| cytidine deaminase [Flavobacteria bacterium BAL38]
          Length = 159

 Score = 33.3 bits (76), Expect = 9.8,   Method: Composition-based stats.
 Identities = 15/68 (22%), Positives = 26/68 (38%), Gaps = 8/68 (11%)

Query: 26  VGAVAVLNNKIISRAGNRNRELKDVTAH-AEILAIRMGCRILSQEILPEVDLYVT----- 79
           VGA  +L+N II +  N+       +   AE +AI           + ++ +  +     
Sbjct: 45  VGAAILLDNGIIVQGSNQENAAY-PSGLCAERVAIFYAGSTYPDAKIVKMFITASPQDRE 103

Query: 80  -LEPCTMC 86
             EP   C
Sbjct: 104 LTEPIPPC 111


  Database: nr
    Posted date:  May 22, 2011 12:22 AM
  Number of letters in database: 999,999,966
  Number of sequences in database:  2,987,313
  
  Database: /data/usr2/db/fasta/nr.01
    Posted date:  May 22, 2011 12:30 AM
  Number of letters in database: 999,999,796
  Number of sequences in database:  2,903,041
  
  Database: /data/usr2/db/fasta/nr.02
    Posted date:  May 22, 2011 12:36 AM
  Number of letters in database: 999,999,281
  Number of sequences in database:  2,904,016
  
  Database: /data/usr2/db/fasta/nr.03
    Posted date:  May 22, 2011 12:41 AM
  Number of letters in database: 999,999,960
  Number of sequences in database:  2,935,328
  
  Database: /data/usr2/db/fasta/nr.04
    Posted date:  May 22, 2011 12:46 AM
  Number of letters in database: 842,794,627
  Number of sequences in database:  2,394,679
  
Lambda     K      H
   0.315    0.194    0.711 

Lambda     K      H
   0.267   0.0597    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,148,363,623
Number of Sequences: 14124377
Number of extensions: 242302796
Number of successful extensions: 494067
Number of sequences better than 10.0: 7437
Number of HSP's better than 10.0 without gapping: 9421
Number of HSP's successfully gapped in prelim test: 2112
Number of HSP's that attempted gapping in prelim test: 468489
Number of HSP's gapped (non-prelim): 12153
length of query: 149
length of database: 4,842,793,630
effective HSP length: 112
effective length of query: 37
effective length of database: 3,260,863,406
effective search space: 120651946022
effective search space used: 120651946022
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.0 bits)
S2: 77 (33.7 bits)